#chr	Ass1	Ass2	Strand	Mss1	Mss2	Type	Ratio	Alt_average_sj	Model_average_sj	Alt_sj	Model_sj	Isoform	Gene	Symbol	Chr	GeneType	Description
chr1	3277540	3283662	-	3277540	3283832	A5SS	0.5	50	50	ENSMUST00000162897.2	ENSMUSG00000051951.6	Xkr4	chr1	protein_coding	X-linked Kx blood group related 4
chr1	4054521	4055383	-	3976357	4055383	A3SS	0.5	50	50	ENSMUST00000194643.2	ENSMUSG00000102343.2	Gm37381	chr1	lncRNA	predicted gene, 37381
chr1	4363235	4422133	-	4363235;4381656	4381493;4422133	ES	0.33	50	50	ENSMUST00000208660.2	ENSMUSG00000025900.14	Rp1	chr1	protein_coding	retinitis pigmentosa 1 (human)
chr1	4420314	4422133	-	4381656	4422133	A3SS	0.33	50	50	ENSMUST00000208660.2	ENSMUSG00000025900.14	Rp1	chr1	protein_coding	retinitis pigmentosa 1 (human)
chr1	4423060	4430423	-	4423060	4479393	A5SS	0.5	50	50	ENSMUST00000208660.2	ENSMUSG00000025900.14	Rp1	chr1	protein_coding	retinitis pigmentosa 1 (human)
chr1	4420314	4422133	-	4363235	4422133	A3SS	0.33	50	50	ENSMUST00000208793.2	ENSMUSG00000025900.14	Rp1	chr1	protein_coding	retinitis pigmentosa 1 (human)
chr1	4562891	4563995	-	4562891;4563689	4563323;4563995	ES	0.33	50	50	ENSMUST00000027035.10	ENSMUSG00000025902.14	Sox17	chr1	protein_coding	SRY (sex determining region Y)-box 17
chr1	4564086	4566514	-	4564086;4566165	4565359;4566514	ES	0.33	50	50	ENSMUST00000027035.10	ENSMUSG00000025902.14	Sox17	chr1	protein_coding	SRY (sex determining region Y)-box 17
chr1	4563713	4563995	-	4563689	4563995	A3SS	0.33	50	50	ENSMUST00000027035.10	ENSMUSG00000025902.14	Sox17	chr1	protein_coding	SRY (sex determining region Y)-box 17
chr1	4563713	4565359	-	4564086	4565359	A3SS&ES	0.5	50	50	ENSMUST00000027035.10	ENSMUSG00000025902.14	Sox17	chr1	protein_coding	SRY (sex determining region Y)-box 17
chr1	4565421	4566514	-	4566165	4566514	A3SS	0.33	50	50	ENSMUST00000027035.10	ENSMUSG00000025902.14	Sox17	chr1	protein_coding	SRY (sex determining region Y)-box 17
chr1	4564086;4565421	4565359;4566514	-	4564086	4566514	cassetteExon	0.5	100	100	ENSMUST00000195555.2	ENSMUSG00000025902.14	Sox17	chr1	protein_coding	SRY (sex determining region Y)-box 17
chr1	4566165	4566514	-	4564086	4566514	A3SS	0.33	50	50	ENSMUST00000195555.2	ENSMUSG00000025902.14	Sox17	chr1	protein_coding	SRY (sex determining region Y)-box 17
chr1	4562891;4563713	4563323;4563995	-	4562891	4563995	cassetteExon	0.5	100	100	ENSMUST00000192650.6	ENSMUSG00000025902.14	Sox17	chr1	protein_coding	SRY (sex determining region Y)-box 17
chr1	4562891;4563713	4563323;4565359	-	4562891;4564086	4563995;4565359	MXE	0.5	100	100	ENSMUST00000192650.6	ENSMUSG00000025902.14	Sox17	chr1	protein_coding	SRY (sex determining region Y)-box 17
chr1	4563713;4565421	4565359;4566514	-	4563713;4564086	4563995;4566514	MXE	0.5	100	100	ENSMUST00000116652.8	ENSMUSG00000025902.14	Sox17	chr1	protein_coding	SRY (sex determining region Y)-box 17
chr1	4562891	4563995	-	4562891	4563323	5pMXE	0.5	50	50	ENSMUST00000191939.2	ENSMUSG00000025902.14	Sox17	chr1	protein_coding	SRY (sex determining region Y)-box 17
chr1	4563713;4564086	4563995;4565359	-	4563713	4565359	cassetteExon	0.5	100	100	ENSMUST00000192913.2	ENSMUSG00000025902.14	Sox17	chr1	protein_coding	SRY (sex determining region Y)-box 17
chr1	4562891;4564086	4563995;4566514	-	4562891;4566165	4563323;4566514	MXE	0.5	100	100	ENSMUST00000192913.2	ENSMUSG00000025902.14	Sox17	chr1	protein_coding	SRY (sex determining region Y)-box 17
chr1	4563713;4564086	4563995;4566514	-	4563713;4566165	4565359;4566514	MXE	0.5	100	100	ENSMUST00000192913.2	ENSMUSG00000025902.14	Sox17	chr1	protein_coding	SRY (sex determining region Y)-box 17
chr1	4852956	4855796	-	4852956;4854328	4854174;4855796	ES	0.5	50	50	ENSMUST00000130201.8	ENSMUSG00000033845.14	Mrpl15	chr1	protein_coding	mitochondrial ribosomal protein L15
chr1	4847024	4847748	-	4844739	4847748	A3SS	0.5	50	50	ENSMUST00000130201.8	ENSMUSG00000033845.14	Mrpl15	chr1	protein_coding	mitochondrial ribosomal protein L15
chr1	4852524	4852791	-	4847871	4852791	A3SS	0.5	50	50	ENSMUST00000130201.8	ENSMUSG00000033845.14	Mrpl15	chr1	protein_coding	mitochondrial ribosomal protein L15
chr1	4852829	4854174	-	4852956	4854174	A3SS	0.5	50	50	ENSMUST00000130201.8	ENSMUSG00000033845.14	Mrpl15	chr1	protein_coding	mitochondrial ribosomal protein L15
chr1	4852956	4855796	-	4854328	4855796	A3SS&ES	0.5	50	50	ENSMUST00000115538.5	ENSMUSG00000033845.14	Mrpl15	chr1	protein_coding	mitochondrial ribosomal protein L15
chr1	4878205	4898807	+	4878205;4878709	4878678;4898807	ES	0.5	50	50	ENSMUST00000134384.8	ENSMUSG00000025903.15	Lypla1	chr1	protein_coding	lysophospholipase 1
chr1	4898872	4902534	+	4898872;4900538	4900491;4902534	ES	0.5	50	50	ENSMUST00000134384.8	ENSMUSG00000025903.15	Lypla1	chr1	protein_coding	lysophospholipase 1
chr1	4907297	4911179	+	4907297;4909711	4909610;4911179	ES	0.5	50	50	ENSMUST00000134384.8	ENSMUSG00000025903.15	Lypla1	chr1	protein_coding	lysophospholipase 1
chr1	4911355	4915186	+	4911355	4917007	A3SS	0.5	50	50	ENSMUST00000134384.8	ENSMUSG00000025903.15	Lypla1	chr1	protein_coding	lysophospholipase 1
chr1	4878588	4878678	+	4878205	4878678	A5SS	0.5	50	50	ENSMUST00000134384.8	ENSMUSG00000025903.15	Lypla1	chr1	protein_coding	lysophospholipase 1
chr1	4911355	4937693	+	4911355	4915186	3pMXE	0.33	50	50	ENSMUST00000027036.11	ENSMUSG00000025903.15	Lypla1	chr1	protein_coding	lysophospholipase 1
chr1	4907297	4911179	+	4909711	4911179	A5SS	0.5	50	50	ENSMUST00000141278.2	ENSMUSG00000025903.15	Lypla1	chr1	protein_coding	lysophospholipase 1
chr1	4911355	4917007	+	4911355	4937693	A3SS	0.33	50	50	ENSMUST00000155020.2	ENSMUSG00000104217.2	Gm37988	chr1	protein_coding	predicted gene, 37988
chr1	4928199	4937693	+	4911355	4937693	A5SS	0.33	50	50	ENSMUST00000155020.2	ENSMUSG00000104217.2	Gm37988	chr1	protein_coding	predicted gene, 37988
chr1	4928726	4937693	+	4911355	4937693	A5SS	0.33	50	50	ENSMUST00000155020.2	ENSMUSG00000104217.2	Gm37988	chr1	protein_coding	predicted gene, 37988
chr1	4928726	4937693	+	4928199	4937693	A5SS	0.33	50	50	ENSMUST00000081551.14	ENSMUSG00000033813.16	Tcea1	chr1	protein_coding	transcription elongation factor A (SII) 1
chr1	4987203	5089534	-	4987203;4994212	4994070;5089534	ES	0.5	50	50	ENSMUST00000002533.15	ENSMUSG00000002459.18	Rgs20	chr1	protein_coding	regulator of G-protein signaling 20
chr1	4994212	5090961	-	4994212	5089534	5pMXE	0.25	50	50	ENSMUST00000002533.15	ENSMUSG00000002459.18	Rgs20	chr1	protein_coding	regulator of G-protein signaling 20
chr1	4994212	5140233	-	4994212	5089534	5pMXE	0.25	50	50	ENSMUST00000002533.15	ENSMUSG00000002459.18	Rgs20	chr1	protein_coding	regulator of G-protein signaling 20
chr1	4994212	5088799	-	4994212	5089534	A5SS	0.25	50	50	ENSMUST00000002533.15	ENSMUSG00000002459.18	Rgs20	chr1	protein_coding	regulator of G-protein signaling 20
chr1	4994212	5140233	-	4994212;5091260	5090961;5140233	ES	0.33	50	50	ENSMUST00000118000.8	ENSMUSG00000002459.18	Rgs20	chr1	protein_coding	regulator of G-protein signaling 20
chr1	5133407	5140233	-	5091260	5140233	A3SS	0.33	50	50	ENSMUST00000118000.8	ENSMUSG00000002459.18	Rgs20	chr1	protein_coding	regulator of G-protein signaling 20
chr1	4987203	5089534	-	4987203	4994070	A5SS&ES	0.5	50	50	ENSMUST00000118000.8	ENSMUSG00000002459.18	Rgs20	chr1	protein_coding	regulator of G-protein signaling 20
chr1	4994212	5088799	-	4994212	5090961	A5SS	0.25	50	50	ENSMUST00000118000.8	ENSMUSG00000002459.18	Rgs20	chr1	protein_coding	regulator of G-protein signaling 20
chr1	4994212	5140233	-	4994212	5088799	5pMXE	0.25	50	50	ENSMUST00000119256.8	ENSMUSG00000002459.18	Rgs20	chr1	protein_coding	regulator of G-protein signaling 20
chr1	5133407	5140233	-	4994212	5140233	A3SS	0.33	50	50	ENSMUST00000147158.2	ENSMUSG00000002459.18	Rgs20	chr1	protein_coding	regulator of G-protein signaling 20
chr1	4987203	5089534	-	4994212	5089534	3pMXE	0.5	50	50	ENSMUST00000156289.2	ENSMUSG00000002459.18	Rgs20	chr1	protein_coding	regulator of G-protein signaling 20
chr1	5168356	5187613	+	5168356;5171346	5171293;5187613	ES	0.5	50	50	ENSMUST00000192847.6	ENSMUSG00000033793.13	Atp6v1h	chr1	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit H
chr1	5203485;5206160	5206035;5213973	+	5203485	5213973	cassetteExon	0.5	100	100	ENSMUST00000192847.6	ENSMUSG00000033793.13	Atp6v1h	chr1	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit H
chr1	5153501	5154640	+	5140367	5154640	A5SS	0.33	50	50	ENSMUST00000192847.6	ENSMUSG00000033793.13	Atp6v1h	chr1	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit H
chr1	5153501	5159232	+	5154786	5159232	A5SS&ES	0.5	50	50	ENSMUST00000192847.6	ENSMUSG00000033793.13	Atp6v1h	chr1	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit H
chr1	5153848	5154640	+	5140367	5154640	A5SS	0.33	50	50	ENSMUST00000192847.6	ENSMUSG00000033793.13	Atp6v1h	chr1	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit H
chr1	5153501	5159232	+	5153501;5154786	5154640;5159232	ES	0.5	50	50	ENSMUST00000044369.13	ENSMUSG00000033793.13	Atp6v1h	chr1	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit H
chr1	5153848	5154640	+	5153501	5154640	A5SS	0.33	50	50	ENSMUST00000044369.13	ENSMUSG00000033793.13	Atp6v1h	chr1	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit H
chr1	5153501	5159232	+	5153501	5154640	3pMXE	0.5	50	50	ENSMUST00000194978.6	ENSMUSG00000033793.13	Atp6v1h	chr1	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit H
chr1	5658886	5659228	+	5658886	5659258	A3SS	0.5	50	50	ENSMUST00000160777.8	ENSMUSG00000025905.15	Oprk1	chr1	protein_coding	opioid receptor, kappa 1
chr1	6276494	6298164	+	6276494;6293969	6293823;6298164	ES	0.25	50	50	ENSMUST00000159906.8	ENSMUSG00000025907.15	Rb1cc1	chr1	protein_coding	RB1-inducible coiled-coil 1
chr1	6285181	6298164	+	6293969	6298164	A5SS&ES	0.25	50	50	ENSMUST00000159906.8	ENSMUSG00000025907.15	Rb1cc1	chr1	protein_coding	RB1-inducible coiled-coil 1
chr1	6285476	6298164	+	6293969	6298164	A5SS&ES	0.25	50	50	ENSMUST00000159906.8	ENSMUSG00000025907.15	Rb1cc1	chr1	protein_coding	RB1-inducible coiled-coil 1
chr1	6285181	6298164	+	6276494	6298164	A5SS	0.25	50	50	ENSMUST00000160871.8	ENSMUSG00000025907.15	Rb1cc1	chr1	protein_coding	RB1-inducible coiled-coil 1
chr1	6285476	6298164	+	6276494	6298164	A5SS	0.25	50	50	ENSMUST00000160871.8	ENSMUSG00000025907.15	Rb1cc1	chr1	protein_coding	RB1-inducible coiled-coil 1
chr1	6333488	6335798	+	6333488;6334814	6334766;6335798	ES	0.5	50	50	ENSMUST00000027040.13	ENSMUSG00000025907.15	Rb1cc1	chr1	protein_coding	RB1-inducible coiled-coil 1
chr1	6320391	6321155	+	6320391	6331154	A3SS	0.5	50	50	ENSMUST00000027040.13	ENSMUSG00000025907.15	Rb1cc1	chr1	protein_coding	RB1-inducible coiled-coil 1
chr1	6285476	6298164	+	6285181	6298164	A5SS	0.25	50	50	ENSMUST00000027040.13	ENSMUSG00000025907.15	Rb1cc1	chr1	protein_coding	RB1-inducible coiled-coil 1
chr1	6315152	6315382	+	6315203	6315382	A5SS	0.5	50	50	ENSMUST00000027040.13	ENSMUSG00000025907.15	Rb1cc1	chr1	protein_coding	RB1-inducible coiled-coil 1
chr1	6341042	6342925	+	6341051	6342925	A5SS	0.5	50	50	ENSMUST00000027040.13	ENSMUSG00000025907.15	Rb1cc1	chr1	protein_coding	RB1-inducible coiled-coil 1
chr1	6333488	6335798	+	6333488	6334766	3pMXE	0.5	50	50	ENSMUST00000159349.2	ENSMUSG00000025907.15	Rb1cc1	chr1	protein_coding	RB1-inducible coiled-coil 1
chr1	6557965	6823218	+	6557965;6807881	6807804;6823218	ES	0.2	50	50	ENSMUST00000140079.8	ENSMUSG00000033740.18	St18	chr1	protein_coding	suppression of tumorigenicity 18
chr1	6890369	6903787	+	6890369;6898245	6898000;6903787	ES	0.5	50	50	ENSMUST00000140079.8	ENSMUSG00000033740.18	St18	chr1	protein_coding	suppression of tumorigenicity 18
chr1	6807881;6822592	6822520;6823218	+	6807881	6823218	cassetteExon	0.5	100	100	ENSMUST00000140079.8	ENSMUSG00000033740.18	St18	chr1	protein_coding	suppression of tumorigenicity 18
chr1	6823260;6823826	6823780;6839122	+	6823260	6839122	cassetteExon	0.5	100	100	ENSMUST00000140079.8	ENSMUSG00000033740.18	St18	chr1	protein_coding	suppression of tumorigenicity 18
chr1	6873329;6873942	6873798;6877767	+	6873329	6877767	cassetteExon	0.5	100	100	ENSMUST00000140079.8	ENSMUSG00000033740.18	St18	chr1	protein_coding	suppression of tumorigenicity 18
chr1	6927667	6929212	+	6927667	6928684	A3SS	0.5	50	50	ENSMUST00000140079.8	ENSMUSG00000033740.18	St18	chr1	protein_coding	suppression of tumorigenicity 18
chr1	6800464	6807804	+	6557965	6807804	A5SS	0.5	50	50	ENSMUST00000140079.8	ENSMUSG00000033740.18	St18	chr1	protein_coding	suppression of tumorigenicity 18
chr1	6800464	6823218	+	6807881	6823218	A5SS&ES	0.2	50	50	ENSMUST00000140079.8	ENSMUSG00000033740.18	St18	chr1	protein_coding	suppression of tumorigenicity 18
chr1	6805196	6823218	+	6807881	6823218	A5SS&ES	0.2	50	50	ENSMUST00000140079.8	ENSMUSG00000033740.18	St18	chr1	protein_coding	suppression of tumorigenicity 18
chr1	6800464	6823218	+	6557965	6823218	A5SS	0.2	50	50	ENSMUST00000131494.8	ENSMUSG00000033740.18	St18	chr1	protein_coding	suppression of tumorigenicity 18
chr1	6805196	6823218	+	6557965	6823218	A5SS	0.2	50	50	ENSMUST00000131494.8	ENSMUSG00000033740.18	St18	chr1	protein_coding	suppression of tumorigenicity 18
chr1	6822592	6823218	+	6557965	6823218	A5SS	0.2	50	50	ENSMUST00000131494.8	ENSMUSG00000033740.18	St18	chr1	protein_coding	suppression of tumorigenicity 18
chr1	6800464	6822520	+	6800464;6807881	6807804;6822520	ES	0.5	50	50	ENSMUST00000043578.13	ENSMUSG00000033740.18	St18	chr1	protein_coding	suppression of tumorigenicity 18
chr1	6805196	6823218	+	6822592	6823218	A5SS&ES	0.25	50	50	ENSMUST00000043578.13	ENSMUSG00000033740.18	St18	chr1	protein_coding	suppression of tumorigenicity 18
chr1	6800464	6823218	+	6800464;6807881	6807804;6823218	ES	0.25	50	50	ENSMUST00000139756.8	ENSMUSG00000033740.18	St18	chr1	protein_coding	suppression of tumorigenicity 18
chr1	6800464;6822592	6822520;6823218	+	6800464;6807881	6807804;6823218	MXE	0.5	100	100	ENSMUST00000139756.8	ENSMUSG00000033740.18	St18	chr1	protein_coding	suppression of tumorigenicity 18
chr1	6800464	6823218	+	6800464;6822592	6822520;6823218	ES	0.25	50	50	ENSMUST00000131467.8	ENSMUSG00000033740.18	St18	chr1	protein_coding	suppression of tumorigenicity 18
chr1	6805196	6823218	+	6800464	6823218	A5SS	0.2	50	50	ENSMUST00000151281.8	ENSMUSG00000033740.18	St18	chr1	protein_coding	suppression of tumorigenicity 18
chr1	6557965	6823218	+	6807881	6823218	5pMXE	0.2	50	50	ENSMUST00000163727.4	ENSMUSG00000033740.18	St18	chr1	protein_coding	suppression of tumorigenicity 18
chr1	6890369	6903787	+	6898245	6903787	5pMXE	0.5	50	50	ENSMUST00000151015.2	ENSMUSG00000033740.18	St18	chr1	protein_coding	suppression of tumorigenicity 18
chr1	7159440	7217861	+	7159440;7190839	7190418;7217861	ES	0.5	50	50	ENSMUST00000061280.17	ENSMUSG00000051285.18	Pcmtd1	chr1	protein_coding	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
chr1	7217963;7225495	7225304;7231116	+	7217963	7231116	cassetteExon	0.5	100	100	ENSMUST00000061280.17	ENSMUSG00000051285.18	Pcmtd1	chr1	protein_coding	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
chr1	7233595;7236742	7236533;7239739	+	7233595	7239739	cassetteExon	0.5	100	100	ENSMUST00000061280.17	ENSMUSG00000051285.18	Pcmtd1	chr1	protein_coding	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
chr1	7159440	7190418	+	7159440	7239739	A3SS	0.33	50	50	ENSMUST00000182823.2	ENSMUSG00000051285.18	Pcmtd1	chr1	protein_coding	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
chr1	7159440	7217861	+	7159440	7239739	A3SS	0.33	50	50	ENSMUST00000182823.2	ENSMUSG00000051285.18	Pcmtd1	chr1	protein_coding	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
chr1	7233595	7239739	+	7159440	7239739	A5SS	0.33	50	50	ENSMUST00000182823.2	ENSMUSG00000051285.18	Pcmtd1	chr1	protein_coding	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
chr1	7236742	7239739	+	7159440	7239739	A5SS	0.33	50	50	ENSMUST00000182823.2	ENSMUSG00000051285.18	Pcmtd1	chr1	protein_coding	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
chr1	7217963	7231116	+	7225495	7231116	5pMXE	0.5	50	50	ENSMUST00000182388.8	ENSMUSG00000051285.18	Pcmtd1	chr1	protein_coding	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
chr1	7452306	7467942	-	7422118	7467942	A3SS	0.33	50	50	ENSMUST00000181554.2	ENSMUSG00000097797.7	Gm26901	chr1	lncRNA	predicted gene, 26901
chr1	7454064	7467942	-	7422118	7467942	A3SS	0.33	50	50	ENSMUST00000181554.2	ENSMUSG00000097797.7	Gm26901	chr1	lncRNA	predicted gene, 26901
chr1	7446231;7450715	7450610;7452251	-	7446231	7452251	cassetteExon	0.5	100	100	ENSMUST00000193106.6	ENSMUSG00000097797.7	Gm26901	chr1	lncRNA	predicted gene, 26901
chr1	7452306;7454064	7453868;7467942	-	7452306	7467942	cassetteExon	0.5	100	100	ENSMUST00000193106.6	ENSMUSG00000097797.7	Gm26901	chr1	lncRNA	predicted gene, 26901
chr1	8874194;8952438	8952385;9069410	-	8874194	9069410	cassetteExon	0.5	100	100	ENSMUST00000132064.8	ENSMUSG00000025909.17	Sntg1	chr1	protein_coding	syntrophin, gamma 1
chr1	9273485;9319635	9319544;9368358	-	9273485	9368358	cassetteExon	0.5	100	100	ENSMUST00000132064.8	ENSMUSG00000025909.17	Sntg1	chr1	protein_coding	syntrophin, gamma 1
chr1	8748204	8749297	-	8748201	8749297	A3SS	0.5	50	50	ENSMUST00000132064.8	ENSMUSG00000025909.17	Sntg1	chr1	protein_coding	syntrophin, gamma 1
chr1	9021114	9069410	-	8874194	9069410	A3SS	0.33	50	50	ENSMUST00000132064.8	ENSMUSG00000025909.17	Sntg1	chr1	protein_coding	syntrophin, gamma 1
chr1	8535777	8540635	-	8535777	8624949	A5SS	0.5	50	50	ENSMUST00000132064.8	ENSMUSG00000025909.17	Sntg1	chr1	protein_coding	syntrophin, gamma 1
chr1	8752253	8853007	-	8752253	8852987	A5SS	0.5	50	50	ENSMUST00000132064.8	ENSMUSG00000025909.17	Sntg1	chr1	protein_coding	syntrophin, gamma 1
chr1	9021114	9069410	-	8952438	9069410	A3SS	0.33	50	50	ENSMUST00000191683.6	ENSMUSG00000025909.17	Sntg1	chr1	protein_coding	syntrophin, gamma 1
chr1	8677376	8695003	-	8653558	8695003	A3SS	0.5	50	50	ENSMUST00000140302.8	ENSMUSG00000025909.17	Sntg1	chr1	protein_coding	syntrophin, gamma 1
chr1	8653558	8665636	-	8653558	8695003	A5SS	0.5	50	50	ENSMUST00000140302.8	ENSMUSG00000025909.17	Sntg1	chr1	protein_coding	syntrophin, gamma 1
chr1	8518356	8533618	-	8484537	8533618	A3SS	0.5	50	50	ENSMUST00000135046.4	ENSMUSG00000025909.17	Sntg1	chr1	protein_coding	syntrophin, gamma 1
chr1	8484537	8515251	-	8484537	8533618	A5SS	0.5	50	50	ENSMUST00000135046.4	ENSMUSG00000025909.17	Sntg1	chr1	protein_coding	syntrophin, gamma 1
chr1	9620169	9623148	+	9620169;9621982	9621942;9623148	ES	0.33	50	50	ENSMUST00000144177.8	ENSMUSG00000025911.15	Adhfe1	chr1	protein_coding	alcohol dehydrogenase, iron containing, 1
chr1	9620169;9620872	9620786;9623148	+	9620169;9621982	9621942;9623148	MXE	0.5	100	100	ENSMUST00000144177.8	ENSMUSG00000025911.15	Adhfe1	chr1	protein_coding	alcohol dehydrogenase, iron containing, 1
chr1	9620169	9623543	+	9620169;9623201	9623148;9623543	ES	0.5	50	50	ENSMUST00000027044.15	ENSMUSG00000025911.15	Adhfe1	chr1	protein_coding	alcohol dehydrogenase, iron containing, 1
chr1	9620169;9620872	9620786;9623148	+	9620169	9623148	cassetteExon	0.5	100	100	ENSMUST00000027044.15	ENSMUSG00000025911.15	Adhfe1	chr1	protein_coding	alcohol dehydrogenase, iron containing, 1
chr1	9620169	9620786	+	9620169	9623543	A3SS	0.25	50	50	ENSMUST00000186467.2	ENSMUSG00000025911.15	Adhfe1	chr1	protein_coding	alcohol dehydrogenase, iron containing, 1
chr1	9620169	9621942	+	9620169	9623543	A3SS	0.25	50	50	ENSMUST00000186467.2	ENSMUSG00000025911.15	Adhfe1	chr1	protein_coding	alcohol dehydrogenase, iron containing, 1
chr1	9671506	9689775	-	9634096	9689775	A3SS	0.33	50	50	ENSMUST00000115480.8	ENSMUSG00000079671.9	2610203C22Rik	chr1	lncRNA	RIKEN cDNA 2610203C22 gene
chr1	9673900	9689775	-	9634096	9689775	A3SS	0.33	50	50	ENSMUST00000115480.8	ENSMUSG00000079671.9	2610203C22Rik	chr1	lncRNA	RIKEN cDNA 2610203C22 gene
chr1	9673900	9691180	-	9689864	9691180	A3SS&ES	0.5	50	50	ENSMUST00000115480.8	ENSMUSG00000079671.9	2610203C22Rik	chr1	lncRNA	RIKEN cDNA 2610203C22 gene
chr1	9673900;9689864	9689775;9691180	-	9673900	9691180	cassetteExon	0.5	100	100	ENSMUST00000148585.8	ENSMUSG00000079671.9	2610203C22Rik	chr1	lncRNA	RIKEN cDNA 2610203C22 gene
chr1	9673900	9689775	-	9671506	9689775	A3SS	0.33	50	50	ENSMUST00000153239.8	ENSMUSG00000079671.9	2610203C22Rik	chr1	lncRNA	RIKEN cDNA 2610203C22 gene
chr1	9740237	9742437	-	9740237;9741983	9741804;9742437	ES	0.5	50	50	ENSMUST00000088658.11	ENSMUSG00000025912.17	Mybl1	chr1	protein_coding	myeloblastosis oncogene-like 1
chr1	9763617	9769847	-	9763617	9770160	A5SS	0.5	50	50	ENSMUST00000088658.11	ENSMUSG00000025912.17	Mybl1	chr1	protein_coding	myeloblastosis oncogene-like 1
chr1	9822789	9840897	+	9822789	9859881	A3SS	0.33	50	50	ENSMUST00000181821.8	ENSMUSG00000097893.9	1700034P13Rik	chr1	lncRNA	RIKEN cDNA 1700034P13 gene
chr1	9822789	9850558	+	9822789	9859881	A3SS	0.33	50	50	ENSMUST00000181821.8	ENSMUSG00000097893.9	1700034P13Rik	chr1	lncRNA	RIKEN cDNA 1700034P13 gene
chr1	9820630	9822674	+	9818829	9822674	A5SS	0.33	50	50	ENSMUST00000181821.8	ENSMUSG00000097893.9	1700034P13Rik	chr1	lncRNA	RIKEN cDNA 1700034P13 gene
chr1	9822153	9822674	+	9818829	9822674	A5SS	0.33	50	50	ENSMUST00000181821.8	ENSMUSG00000097893.9	1700034P13Rik	chr1	lncRNA	RIKEN cDNA 1700034P13 gene
chr1	9851833	9859881	+	9822789	9859881	A5SS	0.33	50	50	ENSMUST00000181821.8	ENSMUSG00000097893.9	1700034P13Rik	chr1	lncRNA	RIKEN cDNA 1700034P13 gene
chr1	9854216	9859881	+	9822789	9859881	A5SS	0.33	50	50	ENSMUST00000181821.8	ENSMUSG00000097893.9	1700034P13Rik	chr1	lncRNA	RIKEN cDNA 1700034P13 gene
chr1	9822789	9840897	+	9822789	9850558	A3SS	0.33	50	50	ENSMUST00000181358.8	ENSMUSG00000097893.9	1700034P13Rik	chr1	lncRNA	RIKEN cDNA 1700034P13 gene
chr1	9854216	9859881	+	9851833	9859881	A5SS	0.33	50	50	ENSMUST00000181358.8	ENSMUSG00000097893.9	1700034P13Rik	chr1	lncRNA	RIKEN cDNA 1700034P13 gene
chr1	9818870;9820630	9820583;9822674	+	9818870;9822153	9822034;9822674	MXE	0.5	100	100	ENSMUST00000189431.2	ENSMUSG00000097893.9	1700034P13Rik	chr1	lncRNA	RIKEN cDNA 1700034P13 gene
chr1	9868471;9897344	9897238;9935356	+	9868471	9935356	cassetteExon	0.5	100	100	ENSMUST00000166384.8	ENSMUSG00000025915.15	Sgk3	chr1	protein_coding	serum/glucocorticoid regulated kinase 3
chr1	9935573	9935688	+	9935573	9938608	A3SS	0.5	50	50	ENSMUST00000166384.8	ENSMUSG00000025915.15	Sgk3	chr1	protein_coding	serum/glucocorticoid regulated kinase 3
chr1	9955978	9956214	+	9955978	9956272	A3SS	0.5	50	50	ENSMUST00000166384.8	ENSMUSG00000025915.15	Sgk3	chr1	protein_coding	serum/glucocorticoid regulated kinase 3
chr1	9918610	9935356	+	9868471	9935356	A5SS	0.25	50	50	ENSMUST00000166384.8	ENSMUSG00000025915.15	Sgk3	chr1	protein_coding	serum/glucocorticoid regulated kinase 3
chr1	9918773	9935356	+	9868471	9935356	A5SS	0.25	50	50	ENSMUST00000166384.8	ENSMUSG00000025915.15	Sgk3	chr1	protein_coding	serum/glucocorticoid regulated kinase 3
chr1	9938913	9941855	+	9938691	9941855	A5SS	0.5	50	50	ENSMUST00000166384.8	ENSMUSG00000025915.15	Sgk3	chr1	protein_coding	serum/glucocorticoid regulated kinase 3
chr1	9953725	9954632	+	9952116	9954632	A5SS	0.5	50	50	ENSMUST00000166384.8	ENSMUSG00000025915.15	Sgk3	chr1	protein_coding	serum/glucocorticoid regulated kinase 3
chr1	9918610	9935356	+	9897344	9935356	A5SS	0.25	50	50	ENSMUST00000188782.7	ENSMUSG00000025915.15	Sgk3	chr1	protein_coding	serum/glucocorticoid regulated kinase 3
chr1	9918773	9935356	+	9897344	9935356	A5SS	0.25	50	50	ENSMUST00000188782.7	ENSMUSG00000025915.15	Sgk3	chr1	protein_coding	serum/glucocorticoid regulated kinase 3
chr1	9868471	9935356	+	9868471	9897238	3pMXE	0.5	50	50	ENSMUST00000188625.2	ENSMUSG00000025915.15	Sgk3	chr1	protein_coding	serum/glucocorticoid regulated kinase 3
chr1	9918773	9935356	+	9918610	9935356	A5SS	0.25	50	50	ENSMUST00000171265.8	ENSMUSG00000025915.15	Sgk3	chr1	protein_coding	serum/glucocorticoid regulated kinase 3
chr1	9990897	9994282	+	9990897	9991053	3pMXE	0.5	50	50	ENSMUST00000052843.12	ENSMUSG00000046101.17	Mcmdc2	chr1	protein_coding	minichromosome maintenance domain containing 2
chr1	9978915	9981926	+	9978915	9981900	A3SS	0.5	50	50	ENSMUST00000052843.12	ENSMUSG00000046101.17	Mcmdc2	chr1	protein_coding	minichromosome maintenance domain containing 2
chr1	9982265	9982339	+	9982265	9982381	A3SS	0.5	50	50	ENSMUST00000052843.12	ENSMUSG00000046101.17	Mcmdc2	chr1	protein_coding	minichromosome maintenance domain containing 2
chr1	10002406	10007221	+	10002406;10004290	10004148;10007221	ES	0.5	50	50	ENSMUST00000171802.8	ENSMUSG00000046101.17	Mcmdc2	chr1	protein_coding	minichromosome maintenance domain containing 2
chr1	10004290	10010603	+	10004290;10007330	10007221;10010603	ES	0.5	50	50	ENSMUST00000171802.8	ENSMUSG00000046101.17	Mcmdc2	chr1	protein_coding	minichromosome maintenance domain containing 2
chr1	10002406;10007330	10007221;10010603	+	10002406;10004290	10004148;10010603	MXE	0.5	100	100	ENSMUST00000125294.9	ENSMUSG00000046101.17	Mcmdc2	chr1	protein_coding	minichromosome maintenance domain containing 2
chr1	10012374	10012548	-	10012380	10012548	A3SS	0.5	50	50	ENSMUST00000182580.8	ENSMUSG00000098234.8	Snhg6	chr1	lncRNA	small nucleolar RNA host gene 6
chr1	10039156	10055817	-	10039156;10049172	10049041;10055817	ES	0.5	50	50	ENSMUST00000147000.9	ENSMUSG00000025916.11	Ppp1r42	chr1	protein_coding	protein phosphatase 1, regulatory subunit 42
chr1	10039156;10046924	10046812;10049041	-	10039156	10049041	cassetteExon	0.5	100	100	ENSMUST00000147000.9	ENSMUSG00000025916.11	Ppp1r42	chr1	protein_coding	protein phosphatase 1, regulatory subunit 42
chr1	10039156;10046971	10046812;10049041	-	10039156	10049041	cassetteExon	0.5	100	100	ENSMUST00000147000.9	ENSMUSG00000025916.11	Ppp1r42	chr1	protein_coding	protein phosphatase 1, regulatory subunit 42
chr1	10070362	10079297	-	10070362	10073460	5pMXE	0.5	50	50	ENSMUST00000124874.8	ENSMUSG00000025916.11	Ppp1r42	chr1	protein_coding	protein phosphatase 1, regulatory subunit 42
chr1	10046971	10049041	-	10046924	10049041	A3SS	0.33	50	50	ENSMUST00000124874.8	ENSMUSG00000025916.11	Ppp1r42	chr1	protein_coding	protein phosphatase 1, regulatory subunit 42
chr1	10065502	10069626	-	10065487	10069626	A3SS	0.5	50	50	ENSMUST00000124874.8	ENSMUSG00000025916.11	Ppp1r42	chr1	protein_coding	protein phosphatase 1, regulatory subunit 42
chr1	10070362	10079297	-	10070362;10073678	10073460;10079297	ES	0.5	50	50	ENSMUST00000027049.10	ENSMUSG00000025916.11	Ppp1r42	chr1	protein_coding	protein phosphatase 1, regulatory subunit 42
chr1	10039156	10046812	-	10039156	10055817	A5SS	0.33	50	50	ENSMUST00000130102.8	ENSMUSG00000025916.11	Ppp1r42	chr1	protein_coding	protein phosphatase 1, regulatory subunit 42
chr1	10039156	10055817	-	10049172	10055817	3pMXE	0.5	50	50	ENSMUST00000176398.8	ENSMUSG00000025916.11	Ppp1r42	chr1	protein_coding	protein phosphatase 1, regulatory subunit 42
chr1	10100935	10103483	-	10100935;10102649	10102564;10103483	ES	0.5	50	50	ENSMUST00000027050.10	ENSMUSG00000025917.10	Cops5	chr1	protein_coding	COP9 signalosome subunit 5
chr1	10105388	10107887	-	10105388	10107895	A5SS	0.33	50	50	ENSMUST00000027050.10	ENSMUSG00000025917.10	Cops5	chr1	protein_coding	COP9 signalosome subunit 5
chr1	10105388	10108144	-	10105388	10107895	A5SS	0.33	50	50	ENSMUST00000027050.10	ENSMUSG00000025917.10	Cops5	chr1	protein_coding	COP9 signalosome subunit 5
chr1	10105388	10108144	-	10105388	10107887	A5SS	0.33	50	50	ENSMUST00000186528.7	ENSMUSG00000025917.10	Cops5	chr1	protein_coding	COP9 signalosome subunit 5
chr1	10100935	10103483	-	10102649	10103483	3pMXE	0.5	50	50	ENSMUST00000139578.8	ENSMUSG00000025917.10	Cops5	chr1	protein_coding	COP9 signalosome subunit 5
chr1	10108569	10115301	+	10108355	10115301	A5SS	0.2	50	50	ENSMUST00000191012.7	ENSMUSG00000056763.17	Cspp1	chr1	protein_coding	centrosome and spindle pole associated protein 1
chr1	10110104	10115301	+	10108355	10115301	A5SS	0.2	50	50	ENSMUST00000191012.7	ENSMUSG00000056763.17	Cspp1	chr1	protein_coding	centrosome and spindle pole associated protein 1
chr1	10110112	10115301	+	10108355	10115301	A5SS	0.2	50	50	ENSMUST00000191012.7	ENSMUSG00000056763.17	Cspp1	chr1	protein_coding	centrosome and spindle pole associated protein 1
chr1	10110508	10115301	+	10108355	10115301	A5SS	0.2	50	50	ENSMUST00000191012.7	ENSMUSG00000056763.17	Cspp1	chr1	protein_coding	centrosome and spindle pole associated protein 1
chr1	10115418	10117649	+	10115409	10117649	A5SS	0.33	50	50	ENSMUST00000191012.7	ENSMUSG00000056763.17	Cspp1	chr1	protein_coding	centrosome and spindle pole associated protein 1
chr1	10116780	10117649	+	10115409	10117649	A5SS	0.33	50	50	ENSMUST00000191012.7	ENSMUSG00000056763.17	Cspp1	chr1	protein_coding	centrosome and spindle pole associated protein 1
chr1	10153783	10158276	+	10153783;10156177	10155972;10158276	ES	0.5	50	50	ENSMUST00000071087.12	ENSMUSG00000056763.17	Cspp1	chr1	protein_coding	centrosome and spindle pole associated protein 1
chr1	10166238	10178594	+	10166238;10174589	10174437;10178594	ES	0.5	50	50	ENSMUST00000071087.12	ENSMUSG00000056763.17	Cspp1	chr1	protein_coding	centrosome and spindle pole associated protein 1
chr1	10129048;10130072	10130049;10134558	+	10129048	10134558	cassetteExon	0.5	100	100	ENSMUST00000071087.12	ENSMUSG00000056763.17	Cspp1	chr1	protein_coding	centrosome and spindle pole associated protein 1
chr1	10110104	10115301	+	10108569	10115301	A5SS	0.2	50	50	ENSMUST00000071087.12	ENSMUSG00000056763.17	Cspp1	chr1	protein_coding	centrosome and spindle pole associated protein 1
chr1	10110112	10115301	+	10108569	10115301	A5SS	0.2	50	50	ENSMUST00000071087.12	ENSMUSG00000056763.17	Cspp1	chr1	protein_coding	centrosome and spindle pole associated protein 1
chr1	10110508	10115301	+	10108569	10115301	A5SS	0.2	50	50	ENSMUST00000071087.12	ENSMUSG00000056763.17	Cspp1	chr1	protein_coding	centrosome and spindle pole associated protein 1
chr1	10127172	10128945	+	10117751	10128945	A5SS	0.5	50	50	ENSMUST00000071087.12	ENSMUSG00000056763.17	Cspp1	chr1	protein_coding	centrosome and spindle pole associated protein 1
chr1	10200310	10202679	+	10200257	10202679	A5SS	0.5	50	50	ENSMUST00000071087.12	ENSMUSG00000056763.17	Cspp1	chr1	protein_coding	centrosome and spindle pole associated protein 1
chr1	10110112	10115301	+	10110104	10115301	A5SS	0.2	50	50	ENSMUST00000191521.7	ENSMUSG00000056763.17	Cspp1	chr1	protein_coding	centrosome and spindle pole associated protein 1
chr1	10110508	10115301	+	10110104	10115301	A5SS	0.2	50	50	ENSMUST00000191521.7	ENSMUSG00000056763.17	Cspp1	chr1	protein_coding	centrosome and spindle pole associated protein 1
chr1	10116780	10117649	+	10115418	10117649	A5SS	0.33	50	50	ENSMUST00000191521.7	ENSMUSG00000056763.17	Cspp1	chr1	protein_coding	centrosome and spindle pole associated protein 1
chr1	10110508	10115301	+	10110112	10115301	A5SS	0.2	50	50	ENSMUST00000118263.8	ENSMUSG00000056763.17	Cspp1	chr1	protein_coding	centrosome and spindle pole associated protein 1
chr1	10129048	10134558	+	10129048	10130049	3pMXE	0.5	50	50	ENSMUST00000134716.2	ENSMUSG00000056763.17	Cspp1	chr1	protein_coding	centrosome and spindle pole associated protein 1
chr1	10153783	10158276	+	10153783	10155972	3pMXE	0.5	50	50	ENSMUST00000188249.7	ENSMUSG00000056763.17	Cspp1	chr1	protein_coding	centrosome and spindle pole associated protein 1
chr1	10166238	10178594	+	10174589	10178594	5pMXE	0.5	50	50	ENSMUST00000190625.2	ENSMUSG00000056763.17	Cspp1	chr1	protein_coding	centrosome and spindle pole associated protein 1
chr1	10554288;10559174	10559050;10665845	-	10554288	10665845	cassetteExon	0.5	100	100	ENSMUST00000153695.8	ENSMUSG00000042501.13	Cpa6	chr1	protein_coding	carboxypeptidase A6
chr1	10547354	10547952	-	10547354	10551239	A5SS	0.5	50	50	ENSMUST00000153695.8	ENSMUSG00000042501.13	Cpa6	chr1	protein_coding	carboxypeptidase A6
chr1	11335969	11336218	+	11335969	11336193	A3SS	0.5	50	50	ENSMUST00000027056.12	ENSMUSG00000048960.14	Prex2	chr1	protein_coding	phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
chr1	11328396	11335903	+	11302020	11335903	A5SS	0.33	50	50	ENSMUST00000027056.12	ENSMUSG00000048960.14	Prex2	chr1	protein_coding	phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
chr1	11334319	11335903	+	11302020	11335903	A5SS	0.33	50	50	ENSMUST00000027056.12	ENSMUSG00000048960.14	Prex2	chr1	protein_coding	phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
chr1	11354391	11355281	+	11336383	11355281	A5SS	0.5	50	50	ENSMUST00000027056.12	ENSMUSG00000048960.14	Prex2	chr1	protein_coding	phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
chr1	11334319	11335903	+	11328396	11335903	A5SS	0.33	50	50	ENSMUST00000188189.7	ENSMUSG00000048960.14	Prex2	chr1	protein_coding	phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
chr1	11484861	11588802	+	11484861;11582289	11582142;11588802	ES	0.5	50	50	ENSMUST00000171690.9	ENSMUSG00000057715.14	A830018L16Rik	chr1	protein_coding	RIKEN cDNA A830018L16 gene
chr1	11666541	11818189	+	11666541	11667189	3pMXE	0.5	50	50	ENSMUST00000171690.9	ENSMUSG00000057715.14	A830018L16Rik	chr1	protein_coding	RIKEN cDNA A830018L16 gene
chr1	11588933	11607239	+	11588933	11615378	A3SS	0.5	50	50	ENSMUST00000171690.9	ENSMUSG00000057715.14	A830018L16Rik	chr1	protein_coding	RIKEN cDNA A830018L16 gene
chr1	11658795	11666375	+	11658770	11666375	A5SS	0.5	50	50	ENSMUST00000171690.9	ENSMUSG00000057715.14	A830018L16Rik	chr1	protein_coding	RIKEN cDNA A830018L16 gene
chr1	11900115	12021187	+	11900115;12003815	12003768;12021187	ES	0.5	50	50	ENSMUST00000048613.14	ENSMUSG00000057715.14	A830018L16Rik	chr1	protein_coding	RIKEN cDNA A830018L16 gene
chr1	11818324	11868705	+	11818315	11868705	A5SS	0.5	50	50	ENSMUST00000048613.14	ENSMUSG00000057715.14	A830018L16Rik	chr1	protein_coding	RIKEN cDNA A830018L16 gene
chr1	11900115	12021187	+	11900115	12003768	3pMXE	0.5	50	50	ENSMUST00000141512.8	ENSMUSG00000057715.14	A830018L16Rik	chr1	protein_coding	RIKEN cDNA A830018L16 gene
chr1	12762908	12856303	+	12762908;12798912	12798818;12856303	ES	0.33	50	50	ENSMUST00000177608.8	ENSMUSG00000016918.16	Sulf1	chr1	protein_coding	sulfatase 1
chr1	12918678	12929036	+	12918678;12921017	12920984;12929036	ES	0.5	50	50	ENSMUST00000177608.8	ENSMUSG00000016918.16	Sulf1	chr1	protein_coding	sulfatase 1
chr1	12921017	12921113	+	12921017	12929036	A3SS	0.5	50	50	ENSMUST00000177608.8	ENSMUSG00000016918.16	Sulf1	chr1	protein_coding	sulfatase 1
chr1	12789007	12798818	+	12762908	12798818	A5SS	0.33	50	50	ENSMUST00000177608.8	ENSMUSG00000016918.16	Sulf1	chr1	protein_coding	sulfatase 1
chr1	12789803	12798818	+	12762908	12798818	A5SS	0.33	50	50	ENSMUST00000177608.8	ENSMUSG00000016918.16	Sulf1	chr1	protein_coding	sulfatase 1
chr1	12855823	12856303	+	12798912	12856303	A5SS	0.33	50	50	ENSMUST00000177608.8	ENSMUSG00000016918.16	Sulf1	chr1	protein_coding	sulfatase 1
chr1	12855823	12856303	+	12762908	12856303	A5SS	0.33	50	50	ENSMUST00000180062.8	ENSMUSG00000016918.16	Sulf1	chr1	protein_coding	sulfatase 1
chr1	12789803	12798818	+	12789007	12798818	A5SS	0.33	50	50	ENSMUST00000187376.7	ENSMUSG00000016918.16	Sulf1	chr1	protein_coding	sulfatase 1
chr1	12762908	12856303	+	12798912	12856303	5pMXE	0.33	50	50	ENSMUST00000186405.7	ENSMUSG00000016918.16	Sulf1	chr1	protein_coding	sulfatase 1
chr1	12942552	12949362	-	12942552;12946598	12946534;12949362	ES	0.5	50	50	ENSMUST00000188454.7	ENSMUSG00000025938.17	Slco5a1	chr1	protein_coding	solute carrier organic anion transporter family, member 5A1
chr1	12951676	12991262	-	12951676;12964849	12964651;12991262	ES	0.5	50	50	ENSMUST00000188454.7	ENSMUSG00000025938.17	Slco5a1	chr1	protein_coding	solute carrier organic anion transporter family, member 5A1
chr1	13047873	13059804	-	13014336	13059804	A3SS	0.5	50	50	ENSMUST00000188454.7	ENSMUSG00000025938.17	Slco5a1	chr1	protein_coding	solute carrier organic anion transporter family, member 5A1
chr1	12991426	12995095	-	12991426	13009213	A5SS	0.5	50	50	ENSMUST00000188454.7	ENSMUSG00000025938.17	Slco5a1	chr1	protein_coding	solute carrier organic anion transporter family, member 5A1
chr1	13061187	13061329	-	13061187	13062752	A5SS	0.5	50	50	ENSMUST00000188454.7	ENSMUSG00000025938.17	Slco5a1	chr1	protein_coding	solute carrier organic anion transporter family, member 5A1
chr1	13009424	13014204	-	12964849	13014204	A3SS	0.5	50	50	ENSMUST00000146763.8	ENSMUSG00000025938.17	Slco5a1	chr1	protein_coding	solute carrier organic anion transporter family, member 5A1
chr1	12951676	12991262	-	12951676	12964651	A5SS&ES	0.5	50	50	ENSMUST00000146763.8	ENSMUSG00000025938.17	Slco5a1	chr1	protein_coding	solute carrier organic anion transporter family, member 5A1
chr1	12964849	12991262	-	12964849	13014204	A5SS	0.5	50	50	ENSMUST00000146763.8	ENSMUSG00000025938.17	Slco5a1	chr1	protein_coding	solute carrier organic anion transporter family, member 5A1
chr1	12951676;12964849	12964651;13014204	-	12951676;13009424	12991262;13014204	MXE	0.5	100	100	ENSMUST00000147606.3	ENSMUSG00000025938.17	Slco5a1	chr1	protein_coding	solute carrier organic anion transporter family, member 5A1
chr1	13356249	13444162	-	13356249	13442407	5pMXE	0.33	50	50	ENSMUST00000081713.11	ENSMUSG00000005886.15	Ncoa2	chr1	protein_coding	nuclear receptor coactivator 2
chr1	13232512;13235326	13235120;13237120	-	13232512	13237120	cassetteExon	0.5	100	100	ENSMUST00000081713.11	ENSMUSG00000005886.15	Ncoa2	chr1	protein_coding	nuclear receptor coactivator 2
chr1	13294937	13369887	-	13294937	13356193	A5SS&ES	0.5	50	50	ENSMUST00000081713.11	ENSMUSG00000005886.15	Ncoa2	chr1	protein_coding	nuclear receptor coactivator 2
chr1	13356249	13369887	-	13356249	13442407	A5SS	0.33	50	50	ENSMUST00000081713.11	ENSMUSG00000005886.15	Ncoa2	chr1	protein_coding	nuclear receptor coactivator 2
chr1	13294937;13369946	13369887;13444162	-	13294937;13356249	13356193;13444162	MXE	0.5	100	100	ENSMUST00000068304.13	ENSMUSG00000005886.15	Ncoa2	chr1	protein_coding	nuclear receptor coactivator 2
chr1	13356249;13369946	13369887;13444162	-	13356249	13444162	cassetteExon	0.5	100	100	ENSMUST00000068304.13	ENSMUSG00000005886.15	Ncoa2	chr1	protein_coding	nuclear receptor coactivator 2
chr1	13232512	13237120	-	13235326	13237120	3pMXE	0.5	50	50	ENSMUST00000147927.8	ENSMUSG00000005886.15	Ncoa2	chr1	protein_coding	nuclear receptor coactivator 2
chr1	13294937	13369887	-	13294937;13356249	13356193;13369887	ES	0.5	50	50	ENSMUST00000143603.8	ENSMUSG00000005886.15	Ncoa2	chr1	protein_coding	nuclear receptor coactivator 2
chr1	13649790	13651247	-	13649790;13650035	13649914;13651247	ES	0.5	50	50	ENSMUST00000027068.11	ENSMUSG00000025935.11	Tram1	chr1	protein_coding	translocating chain-associating membrane protein 1
chr1	13649790	13651247	-	13649790	13649914	5pMXE	0.5	50	50	ENSMUST00000185447.2	ENSMUSG00000025935.11	Tram1	chr1	protein_coding	translocating chain-associating membrane protein 1
chr1	14353422	14374649	-	14353422;14373121	14372994;14374649	ES	0.5	50	50	ENSMUST00000027066.13	ENSMUSG00000025932.15	Eya1	chr1	protein_coding	EYA transcriptional coactivator and phosphatase 1
chr1	14278325	14279119	-	14254908	14279119	A3SS	0.5	50	50	ENSMUST00000027066.13	ENSMUSG00000025932.15	Eya1	chr1	protein_coding	EYA transcriptional coactivator and phosphatase 1
chr1	14341051	14344289	-	14341066	14344289	A3SS	0.5	50	50	ENSMUST00000027066.13	ENSMUSG00000025932.15	Eya1	chr1	protein_coding	EYA transcriptional coactivator and phosphatase 1
chr1	14344367	14344758	-	14344431	14344758	A3SS	0.33	50	50	ENSMUST00000027066.13	ENSMUSG00000025932.15	Eya1	chr1	protein_coding	EYA transcriptional coactivator and phosphatase 1
chr1	14344434	14344758	-	14344431	14344758	A3SS	0.33	50	50	ENSMUST00000027066.13	ENSMUSG00000025932.15	Eya1	chr1	protein_coding	EYA transcriptional coactivator and phosphatase 1
chr1	14374698	14374797	-	14374698	14379870	A5SS	0.5	50	50	ENSMUST00000027066.13	ENSMUSG00000025932.15	Eya1	chr1	protein_coding	EYA transcriptional coactivator and phosphatase 1
chr1	14344367	14344758	-	14344434	14344758	A3SS	0.33	50	50	ENSMUST00000168081.9	ENSMUSG00000025932.15	Eya1	chr1	protein_coding	EYA transcriptional coactivator and phosphatase 1
chr1	14824549;14824766	14824730;14825454	-	14824549	14825454	cassetteExon	0.5	100	100	ENSMUST00000027062.7	ENSMUSG00000025930.7	Msc	chr1	protein_coding	musculin
chr1	14954503	14957111	-	14954503;14956063	14955974;14957111	ES	0.5	50	50	ENSMUST00000041447.5	ENSMUSG00000032769.6	Trpa1	chr1	protein_coding	transient receptor potential cation channel, subfamily A, member 1
chr1	15883386	15889158	+	15883386;15886196	15886110;15889158	ES	0.5	50	50	ENSMUST00000188371.7	ENSMUSG00000025925.15	Terf1	chr1	protein_coding	telomeric repeat binding factor 1
chr1	15889987	15892141	+	15889987	15901731	A3SS	0.5	50	50	ENSMUST00000188371.7	ENSMUSG00000025925.15	Terf1	chr1	protein_coding	telomeric repeat binding factor 1
chr1	16151217	16163198	-	16151217;16152734	16151892;16163198	ES	0.5	50	50	ENSMUST00000145070.8	ENSMUSG00000067795.14	4930444P10Rik	chr1	protein_coding	RIKEN cDNA 4930444P10 gene
chr1	16152734	16163198	-	16151217	16163198	A3SS	0.5	50	50	ENSMUST00000151004.2	ENSMUSG00000067795.14	4930444P10Rik	chr1	protein_coding	RIKEN cDNA 4930444P10 gene
chr1	16151217	16151892	-	16151217	16163198	A5SS	0.5	50	50	ENSMUST00000151004.2	ENSMUSG00000067795.14	4930444P10Rik	chr1	protein_coding	RIKEN cDNA 4930444P10 gene
chr1	16173908	16174361	-	16173908	16174589	A5SS	0.5	50	50	ENSMUST00000058437.14	ENSMUSG00000043716.14	Rpl7	chr1	protein_coding	ribosomal protein L7
chr1	16533418	16579566	-	16533418;16556374	16556244;16579566	ES	0.25	50	50	ENSMUST00000162751.8	ENSMUSG00000025920.20	Stau2	chr1	protein_coding	staufen double-stranded RNA binding protein 2
chr1	16579632	16590225	-	16579632	16589397	5pMXE	0.33	50	50	ENSMUST00000162751.8	ENSMUSG00000025920.20	Stau2	chr1	protein_coding	staufen double-stranded RNA binding protein 2
chr1	16464434;16497881	16497770;16510547	-	16464434	16510547	cassetteExon	0.5	100	100	ENSMUST00000162751.8	ENSMUSG00000025920.20	Stau2	chr1	protein_coding	staufen double-stranded RNA binding protein 2
chr1	16556374;16558193	16557839;16579566	-	16556374	16579566	cassetteExon	0.5	100	100	ENSMUST00000162751.8	ENSMUSG00000025920.20	Stau2	chr1	protein_coding	staufen double-stranded RNA binding protein 2
chr1	16579632;16582235	16582154;16589397	-	16579632	16589397	cassetteExon	0.5	100	100	ENSMUST00000162751.8	ENSMUSG00000025920.20	Stau2	chr1	protein_coding	staufen double-stranded RNA binding protein 2
chr1	16530643	16533259	-	16510682	16533259	A3SS	0.5	50	50	ENSMUST00000162751.8	ENSMUSG00000025920.20	Stau2	chr1	protein_coding	staufen double-stranded RNA binding protein 2
chr1	16445035	16445567	-	16445035	16460045	A5SS	0.5	50	50	ENSMUST00000162751.8	ENSMUSG00000025920.20	Stau2	chr1	protein_coding	staufen double-stranded RNA binding protein 2
chr1	16510682	16579566	-	16510682;16533418	16533259;16579566	ES	0.25	50	50	ENSMUST00000162627.8	ENSMUSG00000025920.20	Stau2	chr1	protein_coding	staufen double-stranded RNA binding protein 2
chr1	16558193	16579566	-	16533418	16579566	A3SS	0.25	50	50	ENSMUST00000162627.8	ENSMUSG00000025920.20	Stau2	chr1	protein_coding	staufen double-stranded RNA binding protein 2
chr1	16533418	16590225	-	16533418;16579632	16579566;16590225	ES	0.5	50	50	ENSMUST00000162435.8	ENSMUSG00000025920.20	Stau2	chr1	protein_coding	staufen double-stranded RNA binding protein 2
chr1	16579632	16582154	-	16579632	16590225	A5SS	0.33	50	50	ENSMUST00000162435.8	ENSMUSG00000025920.20	Stau2	chr1	protein_coding	staufen double-stranded RNA binding protein 2
chr1	16510682;16579632	16579566;16590225	-	16510682;16533418	16533259;16590225	MXE	0.5	100	100	ENSMUST00000131257.9	ENSMUSG00000025920.20	Stau2	chr1	protein_coding	staufen double-stranded RNA binding protein 2
chr1	16533418	16556244	-	16533418	16590225	A5SS	0.33	50	50	ENSMUST00000131257.9	ENSMUSG00000025920.20	Stau2	chr1	protein_coding	staufen double-stranded RNA binding protein 2
chr1	16556374	16579566	-	16510682	16579566	A3SS	0.25	50	50	ENSMUST00000151888.8	ENSMUSG00000025920.20	Stau2	chr1	protein_coding	staufen double-stranded RNA binding protein 2
chr1	16558193	16579566	-	16510682	16579566	A3SS	0.25	50	50	ENSMUST00000151888.8	ENSMUSG00000025920.20	Stau2	chr1	protein_coding	staufen double-stranded RNA binding protein 2
chr1	16324125	16328936	+	16324269	16328936	A5SS	0.5	50	50	ENSMUST00000161626.2	ENSMUSG00000089982.8	Gm7568	chr1	lncRNA	predicted gene 7568
chr1	16324125	16328936	+	16324125	16333389	A3SS	0.5	50	50	ENSMUST00000160446.8	ENSMUSG00000089982.8	Gm7568	chr1	lncRNA	predicted gene 7568
chr1	16639389	16652151	-	16614256	16652151	A3SS	0.33	50	50	ENSMUST00000182554.9	ENSMUSG00000025939.20	Ube2w	chr1	protein_coding	ubiquitin-conjugating enzyme E2W (putative)
chr1	16641506	16652151	-	16614256	16652151	A3SS	0.33	50	50	ENSMUST00000182554.9	ENSMUSG00000025939.20	Ube2w	chr1	protein_coding	ubiquitin-conjugating enzyme E2W (putative)
chr1	16655655	16668175	-	16655576	16668175	A3SS	0.33	50	50	ENSMUST00000182554.9	ENSMUSG00000025939.20	Ube2w	chr1	protein_coding	ubiquitin-conjugating enzyme E2W (putative)
chr1	16656361	16668175	-	16655576	16668175	A3SS	0.33	50	50	ENSMUST00000182554.9	ENSMUSG00000025939.20	Ube2w	chr1	protein_coding	ubiquitin-conjugating enzyme E2W (putative)
chr1	16641506	16652151	-	16639389	16652151	A3SS	0.5	50	50	ENSMUST00000182080.2	ENSMUSG00000025939.20	Ube2w	chr1	protein_coding	ubiquitin-conjugating enzyme E2W (putative)
chr1	16655655;16656361	16656310;16668175	-	16655655	16668175	cassetteExon	0.5	100	100	ENSMUST00000117146.9	ENSMUSG00000025939.20	Ube2w	chr1	protein_coding	ubiquitin-conjugating enzyme E2W (putative)
chr1	16718231	16727136	-	16718231	16727046	5pMXE	0.25	50	50	ENSMUST00000188641.7	ENSMUSG00000079658.10	Eloc	chr1	protein_coding	elongin C
chr1	16718231	16727216	-	16718231	16727046	5pMXE	0.25	50	50	ENSMUST00000188641.7	ENSMUSG00000079658.10	Eloc	chr1	protein_coding	elongin C
chr1	16716053;16717277	16717212;16718179	-	16716053	16718179	cassetteExon	0.5	100	100	ENSMUST00000188641.7	ENSMUSG00000079658.10	Eloc	chr1	protein_coding	elongin C
chr1	16718231;16726683	16726520;16727046	-	16718231	16727046	cassetteExon	0.5	100	100	ENSMUST00000188641.7	ENSMUSG00000079658.10	Eloc	chr1	protein_coding	elongin C
chr1	16718231	16726520	-	16718231	16727216	A5SS	0.25	50	50	ENSMUST00000115352.10	ENSMUSG00000079658.10	Eloc	chr1	protein_coding	elongin C
chr1	16718231	16727136	-	16718231	16727216	A5SS	0.25	50	50	ENSMUST00000115352.10	ENSMUSG00000079658.10	Eloc	chr1	protein_coding	elongin C
chr1	16718231	16726520	-	16718231	16727136	A5SS	0.25	50	50	ENSMUST00000186948.7	ENSMUSG00000079658.10	Eloc	chr1	protein_coding	elongin C
chr1	16718231	16727046	-	16718231	16726520	5pMXE	0.25	50	50	ENSMUST00000186701.2	ENSMUSG00000079658.10	Eloc	chr1	protein_coding	elongin C
chr1	16716053	16718179	-	16717277	16718179	3pMXE	0.5	50	50	ENSMUST00000188987.7	ENSMUSG00000079658.10	Eloc	chr1	protein_coding	elongin C
chr1	16735729	16735932	+	16735729	16737889	A3SS	0.33	50	50	ENSMUST00000177501.2	ENSMUSG00000025940.7	Tmem70	chr1	protein_coding	transmembrane protein 70
chr1	16735729	16737892	+	16735729	16737889	A3SS	0.33	50	50	ENSMUST00000177501.2	ENSMUSG00000025940.7	Tmem70	chr1	protein_coding	transmembrane protein 70
chr1	16735729	16737892	+	16735596	16737892	A5SS	0.5	50	50	ENSMUST00000177532.2	ENSMUSG00000025940.7	Tmem70	chr1	protein_coding	transmembrane protein 70
chr1	16735729	16735932	+	16735729	16737892	A3SS	0.33	50	50	ENSMUST00000065373.6	ENSMUSG00000025940.7	Tmem70	chr1	protein_coding	transmembrane protein 70
chr1	16761997	16771073	+	16761997	16771019	A3SS	0.5	50	50	ENSMUST00000026881.11	ENSMUSG00000025779.11	Ly96	chr1	protein_coding	lymphocyte antigen 96
chr1	17217207	17227185	+	17217352	17227185	A5SS	0.5	50	50	ENSMUST00000026879.8	ENSMUSG00000025777.9	Gdap1	chr1	protein_coding	ganglioside-induced differentiation-associated-protein 1
chr1	17782818	17797323	-	17782818;17794813	17794746;17797323	ES	0.33	50	50	ENSMUST00000155588.8	ENSMUSG00000085125.8	Gm16070	chr1	lncRNA	predicted gene 16070
chr1	17797196	17797323	-	17794813	17797323	A3SS	0.33	50	50	ENSMUST00000155588.8	ENSMUSG00000085125.8	Gm16070	chr1	lncRNA	predicted gene 16070
chr1	17797196	17797323	-	17782818	17797323	A3SS	0.33	50	50	ENSMUST00000127328.2	ENSMUSG00000085125.8	Gm16070	chr1	lncRNA	predicted gene 16070
chr1	17797358;17797987	17797806;17798818	+	17797358	17798818	cassetteExon	0.5	100	100	ENSMUST00000159958.8	ENSMUSG00000025776.14	Crispld1	chr1	protein_coding	cysteine-rich secretory protein LCCL domain containing 1
chr1	17797358	17798818	+	17797987	17798818	A5SS	0.5	50	50	ENSMUST00000095075.5	ENSMUSG00000025776.14	Crispld1	chr1	protein_coding	cysteine-rich secretory protein LCCL domain containing 1
chr1	18207276;18211756	18211640;18216068	-	18207276	18216068	cassetteExon	0.5	100	100	ENSMUST00000130669.2	ENSMUSG00000025774.15	Crisp4	chr1	protein_coding	cysteine-rich secretory protein 4
chr1	18330890	18335250	-	18321557	18335250	A3SS	0.5	50	50	ENSMUST00000088463.2	ENSMUSG00000067773.7	Defb41	chr1	protein_coding	defensin beta 41
chr1	19177597	19178474	+	19175085	19178474	A5SS	0.5	50	50	ENSMUST00000037294.8	ENSMUSG00000042596.8	Tfap2d	chr1	protein_coding	transcription factor AP-2, delta
chr1	19282647	19284175	+	19279472	19284175	A5SS	0.5	50	50	ENSMUST00000027059.11	ENSMUSG00000025927.14	Tfap2b	chr1	protein_coding	transcription factor AP-2 beta
chr1	20676845	20678543	-	20664192	20678543	A3SS	0.5	50	50	ENSMUST00000088448.12	ENSMUSG00000043760.17	Pkhd1	chr1	protein_coding	polycystic kidney and hepatic disease 1
chr1	20461846	20479581	-	20461846	20462236	A5SS&ES	0.5	50	50	ENSMUST00000088448.12	ENSMUSG00000043760.17	Pkhd1	chr1	protein_coding	polycystic kidney and hepatic disease 1
chr1	20858979	20860712	-	20854883	20860712	A3SS	0.5	50	50	ENSMUST00000189301.2	ENSMUSG00000041872.10	Il17f	chr1	protein_coding	interleukin 17F
chr1	20988113	21002284	+	20960910	21002284	A5SS	0.33	50	50	ENSMUST00000189400.7	ENSMUSG00000025931.16	Paqr8	chr1	protein_coding	progestin and adipoQ receptor family member VIII
chr1	20992590	21002284	+	20960910	21002284	A5SS	0.33	50	50	ENSMUST00000189400.7	ENSMUSG00000025931.16	Paqr8	chr1	protein_coding	progestin and adipoQ receptor family member VIII
chr1	20988113;20992590	20992483;21002284	+	20988113	21002284	cassetteExon	0.5	100	100	ENSMUST00000068880.14	ENSMUSG00000025931.16	Paqr8	chr1	protein_coding	progestin and adipoQ receptor family member VIII
chr1	20988113	21002284	+	20992590	21002284	5pMXE	0.33	50	50	ENSMUST00000187651.2	ENSMUSG00000025931.16	Paqr8	chr1	protein_coding	progestin and adipoQ receptor family member VIII
chr1	21022020	21025559	+	21022020	21025566	A3SS	0.5	50	50	ENSMUST00000160782.2	ENSMUSG00000041809.6	Efhc1	chr1	protein_coding	EF-hand domain (C-terminal) containing 1
chr1	21075861	21076383	-	21075861	21076374	A5SS	0.5	50	50	ENSMUST00000037998.6	ENSMUSG00000041779.6	Tram2	chr1	protein_coding	translocating chain-associating membrane protein 2
chr1	21107684	21113712	-	21107684	21149218	A5SS	0.5	50	50	ENSMUST00000037998.6	ENSMUSG00000041779.6	Tram2	chr1	protein_coding	translocating chain-associating membrane protein 2
chr1	21296903	21299632	+	21296903	21299815	A3SS	0.5	50	50	ENSMUST00000027065.12	ENSMUSG00000025933.16	Tmem14a	chr1	protein_coding	transmembrane protein 14A
chr1	21310883;21315256	21315162;21319975	+	21310883	21319975	cassetteExon	0.5	100	100	ENSMUST00000027067.15	ENSMUSG00000025934.16	Gsta3	chr1	protein_coding	glutathione S-transferase, alpha 3
chr1	21320082;21325047	21324908;21327555	+	21320082	21327555	cassetteExon	0.5	100	100	ENSMUST00000027067.15	ENSMUSG00000025934.16	Gsta3	chr1	protein_coding	glutathione S-transferase, alpha 3
chr1	21360354	21361519	-	21358497	21361519	A3SS	0.5	50	50	ENSMUST00000082032.13	ENSMUSG00000025936.16	Gm4956	chr1	transcribed_unprocessed_pseudogene	predicted gene 4956
chr1	21361660	21363704	-	21361589	21363704	A3SS	0.5	50	50	ENSMUST00000082032.13	ENSMUSG00000025936.16	Gm4956	chr1	transcribed_unprocessed_pseudogene	predicted gene 4956
chr1	21527848	21539694	-	21527848;21536633	21536607;21539694	ES	0.5	50	50	ENSMUST00000029667.13	ENSMUSG00000028033.17	Kcnq5	chr1	protein_coding	potassium voltage-gated channel, subfamily Q, member 5
chr1	21576083	21663748	-	21576083;21605411	21605285;21663748	ES	0.33	50	50	ENSMUST00000029667.13	ENSMUSG00000028033.17	Kcnq5	chr1	protein_coding	potassium voltage-gated channel, subfamily Q, member 5
chr1	21527848;21531831	21531775;21536607	-	21527848	21536607	cassetteExon	0.5	100	100	ENSMUST00000029667.13	ENSMUSG00000028033.17	Kcnq5	chr1	protein_coding	potassium voltage-gated channel, subfamily Q, member 5
chr1	21648247	21663748	-	21605411	21663748	A3SS	0.33	50	50	ENSMUST00000029667.13	ENSMUSG00000028033.17	Kcnq5	chr1	protein_coding	potassium voltage-gated channel, subfamily Q, member 5
chr1	21663838	21906107	-	21663838	22031405	A5SS	0.5	50	50	ENSMUST00000029667.13	ENSMUSG00000028033.17	Kcnq5	chr1	protein_coding	potassium voltage-gated channel, subfamily Q, member 5
chr1	21527848	21536607	-	21476148	21536607	A3SS	0.33	50	50	ENSMUST00000173058.8	ENSMUSG00000028033.17	Kcnq5	chr1	protein_coding	potassium voltage-gated channel, subfamily Q, member 5
chr1	21527848	21539694	-	21536633	21539694	A3SS&ES	0.5	50	50	ENSMUST00000173058.8	ENSMUSG00000028033.17	Kcnq5	chr1	protein_coding	potassium voltage-gated channel, subfamily Q, member 5
chr1	21531831	21536607	-	21476148	21536607	A3SS	0.33	50	50	ENSMUST00000173058.8	ENSMUSG00000028033.17	Kcnq5	chr1	protein_coding	potassium voltage-gated channel, subfamily Q, member 5
chr1	21476148	21494273	-	21476148	21536607	A5SS	0.5	50	50	ENSMUST00000173058.8	ENSMUSG00000028033.17	Kcnq5	chr1	protein_coding	potassium voltage-gated channel, subfamily Q, member 5
chr1	21476148;21536633	21536607;21539694	-	21476148;21527848	21494273;21539694	MXE	0.5	100	100	ENSMUST00000174183.8	ENSMUSG00000028033.17	Kcnq5	chr1	protein_coding	potassium voltage-gated channel, subfamily Q, member 5
chr1	21648247	21663748	-	21576083	21663748	A3SS	0.33	50	50	ENSMUST00000174183.8	ENSMUSG00000028033.17	Kcnq5	chr1	protein_coding	potassium voltage-gated channel, subfamily Q, member 5
chr1	21527848	21531775	-	21527848	21539694	A5SS	0.33	50	50	ENSMUST00000174183.8	ENSMUSG00000028033.17	Kcnq5	chr1	protein_coding	potassium voltage-gated channel, subfamily Q, member 5
chr1	22496183	22497712	-	22467787	22497712	A3SS	0.5	50	50	ENSMUST00000081544.14	ENSMUSG00000041670.20	Rims1	chr1	protein_coding	regulating synaptic membrane exocytosis 1
chr1	22511966	22518516	-	22514815	22518516	A3SS&ES	0.5	50	50	ENSMUST00000081544.14	ENSMUSG00000041670.20	Rims1	chr1	protein_coding	regulating synaptic membrane exocytosis 1
chr1	22367220	22385956	-	22367220	22416517	A5SS	0.5	50	50	ENSMUST00000081544.14	ENSMUSG00000041670.20	Rims1	chr1	protein_coding	regulating synaptic membrane exocytosis 1
chr1	22467787	22468823	-	22467787	22497712	A5SS	0.5	50	50	ENSMUST00000081544.14	ENSMUSG00000041670.20	Rims1	chr1	protein_coding	regulating synaptic membrane exocytosis 1
chr1	22525733	22548333	-	22525733	22572480	A5SS	0.33	50	50	ENSMUST00000081544.14	ENSMUSG00000041670.20	Rims1	chr1	protein_coding	regulating synaptic membrane exocytosis 1
chr1	22525733	22551371	-	22525733	22572480	A5SS	0.33	50	50	ENSMUST00000081544.14	ENSMUSG00000041670.20	Rims1	chr1	protein_coding	regulating synaptic membrane exocytosis 1
chr1	22474739	22491965	-	22474739;22482518	22482435;22491965	ES	0.5	50	50	ENSMUST00000097809.11	ENSMUSG00000041670.20	Rims1	chr1	protein_coding	regulating synaptic membrane exocytosis 1
chr1	22492054	22496121	-	22492054;22493003	22492929;22496121	ES	0.5	50	50	ENSMUST00000097809.11	ENSMUSG00000041670.20	Rims1	chr1	protein_coding	regulating synaptic membrane exocytosis 1
chr1	22525733	22551371	-	22525733	22548333	5pMXE	0.33	50	50	ENSMUST00000239339.2	ENSMUSG00000041670.20	Rims1	chr1	protein_coding	regulating synaptic membrane exocytosis 1
chr1	23418139	23431952	-	23418139	23421896	5pMXE	0.5	50	50	ENSMUST00000027343.6	ENSMUSG00000026158.12	Ogfrl1	chr1	protein_coding	opioid growth factor receptor-like 1
chr1	23931074	23961119	-	23931074	23948744	5pMXE	0.5	50	50	ENSMUST00000149737.8	ENSMUSG00000026155.14	Smap1	chr1	protein_coding	small ArfGAP 1
chr1	23905378	23915455	-	23905374	23915455	A3SS	0.33	50	50	ENSMUST00000149737.8	ENSMUSG00000026155.14	Smap1	chr1	protein_coding	small ArfGAP 1
chr1	23910599	23915455	-	23905374	23915455	A3SS	0.33	50	50	ENSMUST00000149737.8	ENSMUSG00000026155.14	Smap1	chr1	protein_coding	small ArfGAP 1
chr1	23885644	23886800	-	23885644	23887345	A5SS	0.5	50	50	ENSMUST00000149737.8	ENSMUSG00000026155.14	Smap1	chr1	protein_coding	small ArfGAP 1
chr1	23905378;23910599	23910519;23915455	-	23905378	23915455	cassetteExon	0.5	100	100	ENSMUST00000027339.14	ENSMUSG00000026155.14	Smap1	chr1	protein_coding	small ArfGAP 1
chr1	23905378	23909005	-	23905378	23915455	A5SS	0.33	50	50	ENSMUST00000027339.14	ENSMUSG00000026155.14	Smap1	chr1	protein_coding	small ArfGAP 1
chr1	23905378	23910519	-	23905378	23909005	5pMXE	0.33	50	50	ENSMUST00000148710.8	ENSMUSG00000026155.14	Smap1	chr1	protein_coding	small ArfGAP 1
chr1	24053973;24059866	24059756;24060935	-	24053973	24060935	cassetteExon	0.5	100	100	ENSMUST00000187619.7	ENSMUSG00000026153.16	Fam135a	chr1	protein_coding	family with sequence similarity 135, member A
chr1	24085488	24092264	-	24085488;24088288	24088211;24092264	ES	0.5	50	50	ENSMUST00000188712.7	ENSMUSG00000026153.16	Fam135a	chr1	protein_coding	family with sequence similarity 135, member A
chr1	24065792	24067281	-	24065849	24067281	A3SS	0.33	50	50	ENSMUST00000188712.7	ENSMUSG00000026153.16	Fam135a	chr1	protein_coding	family with sequence similarity 135, member A
chr1	24065904	24067281	-	24065849	24067281	A3SS	0.33	50	50	ENSMUST00000188712.7	ENSMUSG00000026153.16	Fam135a	chr1	protein_coding	family with sequence similarity 135, member A
chr1	24069609	24069823	-	24069021	24069823	A3SS	0.5	50	50	ENSMUST00000188712.7	ENSMUSG00000026153.16	Fam135a	chr1	protein_coding	family with sequence similarity 135, member A
chr1	24094998	24096285	-	24094864	24096285	A3SS	0.5	50	50	ENSMUST00000188712.7	ENSMUSG00000026153.16	Fam135a	chr1	protein_coding	family with sequence similarity 135, member A
chr1	24096537	24124492	-	24107059	24124492	A3SS&ES	0.5	50	50	ENSMUST00000188712.7	ENSMUSG00000026153.16	Fam135a	chr1	protein_coding	family with sequence similarity 135, member A
chr1	24125692;24137800	24137712;24139142	-	24125692	24139142	cassetteExon	0.5	100	100	ENSMUST00000187752.7	ENSMUSG00000026153.16	Fam135a	chr1	protein_coding	family with sequence similarity 135, member A
chr1	24065792	24067281	-	24065904	24067281	A3SS	0.33	50	50	ENSMUST00000186331.2	ENSMUSG00000026153.16	Fam135a	chr1	protein_coding	family with sequence similarity 135, member A
chr1	24234538	24235972	+	24234618	24235972	A5SS&ES	0.5	50	50	ENSMUST00000054588.15	ENSMUSG00000026147.17	Col9a1	chr1	protein_coding	collagen, type IX, alpha 1
chr1	24449330	24490843	-	24449330;24456172	24456093;24490843	ES	0.5	50	50	ENSMUST00000144297.2	ENSMUSG00000026141.14	Col19a1	chr1	protein_coding	collagen, type XIX, alpha 1
chr1	24490878	24492825	-	24490878	24491552	5pMXE	0.5	50	50	ENSMUST00000144297.2	ENSMUSG00000026141.14	Col19a1	chr1	protein_coding	collagen, type XIX, alpha 1
chr1	24724654	24767708	+	24724654	24732022	A3SS&ES	0.5	50	50	ENSMUST00000191471.7	ENSMUSG00000073725.9	Lmbrd1	chr1	protein_coding	LMBR1 domain containing 1
chr1	24745125	24746006	+	24745125	24750593	A3SS	0.5	50	50	ENSMUST00000191471.7	ENSMUSG00000073725.9	Lmbrd1	chr1	protein_coding	LMBR1 domain containing 1
chr1	24718115	24724478	+	24717897	24724478	A5SS	0.5	50	50	ENSMUST00000191471.7	ENSMUSG00000073725.9	Lmbrd1	chr1	protein_coding	LMBR1 domain containing 1
chr1	25003469	25003885	-	25002757	25003885	A3SS	0.5	50	50	ENSMUST00000186563.2	ENSMUSG00000100483.2	Gm28237	chr1	lncRNA	predicted gene 28237
chr1	25150944	25156370	-	25150944;25151356	25151258;25156370	ES	0.5	50	50	ENSMUST00000126626.8	ENSMUSG00000033569.18	Adgrb3	chr1	protein_coding	adhesion G protein-coupled receptor B3
chr1	25267628	25435517	-	25267628	25267736	5pMXE	0.5	50	50	ENSMUST00000126626.8	ENSMUSG00000033569.18	Adgrb3	chr1	protein_coding	adhesion G protein-coupled receptor B3
chr1	25170482	25243612	-	25170482	25260841	A5SS	0.5	50	50	ENSMUST00000126626.8	ENSMUSG00000033569.18	Adgrb3	chr1	protein_coding	adhesion G protein-coupled receptor B3
chr1	25865856	25868543	-	25865856;25867167	25866988;25868543	ES	0.5	50	50	ENSMUST00000135518.8	ENSMUSG00000033569.18	Adgrb3	chr1	protein_coding	adhesion G protein-coupled receptor B3
chr1	25170482	25260841	-	25150944	25260841	A3SS	0.5	50	50	ENSMUST00000153568.8	ENSMUSG00000033569.18	Adgrb3	chr1	protein_coding	adhesion G protein-coupled receptor B3
chr1	25150944	25151258	-	25150944	25260841	A5SS	0.33	50	50	ENSMUST00000153568.8	ENSMUSG00000033569.18	Adgrb3	chr1	protein_coding	adhesion G protein-coupled receptor B3
chr1	25150944	25156370	-	25150944	25260841	A5SS	0.33	50	50	ENSMUST00000153568.8	ENSMUSG00000033569.18	Adgrb3	chr1	protein_coding	adhesion G protein-coupled receptor B3
chr1	30863600	30876186	-	30863600;30870640	30868924;30876186	ES	0.5	50	50	ENSMUST00000186733.7	ENSMUSG00000048874.16	Phf3	chr1	protein_coding	PHD finger protein 3
chr1	30870640	30902068	-	30870640;30876347	30876186;30902068	ES	0.33	50	50	ENSMUST00000186733.7	ENSMUSG00000048874.16	Phf3	chr1	protein_coding	PHD finger protein 3
chr1	30902336	30912104	-	30902336	30912659	A5SS	0.5	50	50	ENSMUST00000186733.7	ENSMUSG00000048874.16	Phf3	chr1	protein_coding	PHD finger protein 3
chr1	30863600;30902336	30902068;30912659	-	30863600	30912659	cassetteExon	0.5	100	100	ENSMUST00000186105.7	ENSMUSG00000048874.16	Phf3	chr1	protein_coding	PHD finger protein 3
chr1	30863600	30868924	-	30863600	30912659	A5SS	0.25	50	50	ENSMUST00000186105.7	ENSMUSG00000048874.16	Phf3	chr1	protein_coding	PHD finger protein 3
chr1	30863600	30876186	-	30863600	30912659	A5SS	0.25	50	50	ENSMUST00000186105.7	ENSMUSG00000048874.16	Phf3	chr1	protein_coding	PHD finger protein 3
chr1	30863600	30902068	-	30863600;30876347	30876186;30902068	ES	0.33	50	50	ENSMUST00000191064.7	ENSMUSG00000048874.16	Phf3	chr1	protein_coding	PHD finger protein 3
chr1	30870640	30876186	-	30863600	30876186	A3SS	0.5	50	50	ENSMUST00000191064.7	ENSMUSG00000048874.16	Phf3	chr1	protein_coding	PHD finger protein 3
chr1	30870640	30902068	-	30876347	30902068	A3SS&ES	0.33	50	50	ENSMUST00000191064.7	ENSMUSG00000048874.16	Phf3	chr1	protein_coding	PHD finger protein 3
chr1	30863600	30868924	-	30863600	30876186	A5SS	0.25	50	50	ENSMUST00000191064.7	ENSMUSG00000048874.16	Phf3	chr1	protein_coding	PHD finger protein 3
chr1	30863600	30912659	-	30863600	30902068	5pMXE	0.25	50	50	ENSMUST00000187600.2	ENSMUSG00000048874.16	Phf3	chr1	protein_coding	PHD finger protein 3
chr1	30870640	30902068	-	30863600	30902068	A3SS	0.33	50	50	ENSMUST00000187600.2	ENSMUSG00000048874.16	Phf3	chr1	protein_coding	PHD finger protein 3
chr1	30863600	30868924	-	30863600	30902068	A5SS	0.25	50	50	ENSMUST00000187600.2	ENSMUSG00000048874.16	Phf3	chr1	protein_coding	PHD finger protein 3
chr1	30985720	30988630	-	30985720	30988078	5pMXE	0.5	50	50	ENSMUST00000232841.2	ENSMUSG00000026064.17	Ptp4a1	chr1	protein_coding	protein tyrosine phosphatase 4a1
chr1	30985717	30988630	-	30985720	30988630	A3SS	0.5	50	50	ENSMUST00000233506.2	ENSMUSG00000117310.3	Ptp4a1	chr1	protein_coding	protein tyrosine phosphatase 4a1
chr1	31174328	31243333	-	31086853	31243333	A3SS	0.2	50	50	ENSMUST00000233331.2	ENSMUSG00000086727.9	4931428L18Rik	chr1	protein_coding	RIKEN cDNA 4931428L18 gene
chr1	31180845	31243333	-	31086853	31243333	A3SS	0.2	50	50	ENSMUST00000233331.2	ENSMUSG00000086727.9	4931428L18Rik	chr1	protein_coding	RIKEN cDNA 4931428L18 gene
chr1	31180849	31243333	-	31086853	31243333	A3SS	0.2	50	50	ENSMUST00000233331.2	ENSMUSG00000086727.9	4931428L18Rik	chr1	protein_coding	RIKEN cDNA 4931428L18 gene
chr1	31242469	31243333	-	31086853	31243333	A3SS	0.2	50	50	ENSMUST00000233331.2	ENSMUSG00000086727.9	4931428L18Rik	chr1	protein_coding	RIKEN cDNA 4931428L18 gene
chr1	31060044	31101116	-	31060044	31086666	A5SS&ES	0.5	50	50	ENSMUST00000233331.2	ENSMUSG00000086727.9	4931428L18Rik	chr1	protein_coding	RIKEN cDNA 4931428L18 gene
chr1	31086853	31135453	-	31086853	31243333	A5SS	0.5	50	50	ENSMUST00000233331.2	ENSMUSG00000086727.9	4931428L18Rik	chr1	protein_coding	RIKEN cDNA 4931428L18 gene
chr1	31038024	31059933	-	31038024	31038900	5pMXE	0.5	50	50	ENSMUST00000152491.4	ENSMUSG00000086727.9	4931428L18Rik	chr1	protein_coding	RIKEN cDNA 4931428L18 gene
chr1	31060044;31086853	31086666;31243333	-	31060044;31174328	31101116;31243333	MXE	0.5	100	100	ENSMUST00000187892.8	ENSMUSG00000086727.9	4931428L18Rik	chr1	protein_coding	RIKEN cDNA 4931428L18 gene
chr1	31058766	31059933	-	31038024	31059933	A3SS	0.5	50	50	ENSMUST00000187892.8	ENSMUSG00000086727.9	4931428L18Rik	chr1	protein_coding	RIKEN cDNA 4931428L18 gene
chr1	31180845	31243333	-	31174328	31243333	A3SS	0.2	50	50	ENSMUST00000187892.8	ENSMUSG00000086727.9	4931428L18Rik	chr1	protein_coding	RIKEN cDNA 4931428L18 gene
chr1	31180849	31243333	-	31174328	31243333	A3SS	0.2	50	50	ENSMUST00000187892.8	ENSMUSG00000086727.9	4931428L18Rik	chr1	protein_coding	RIKEN cDNA 4931428L18 gene
chr1	31242469	31243333	-	31174328	31243333	A3SS	0.2	50	50	ENSMUST00000187892.8	ENSMUSG00000086727.9	4931428L18Rik	chr1	protein_coding	RIKEN cDNA 4931428L18 gene
chr1	31180845	31243333	-	31180849	31243333	A3SS	0.2	50	50	ENSMUST00000127775.8	ENSMUSG00000086727.9	4931428L18Rik	chr1	protein_coding	RIKEN cDNA 4931428L18 gene
chr1	31242469	31243333	-	31180849	31243333	A3SS	0.2	50	50	ENSMUST00000127775.8	ENSMUSG00000086727.9	4931428L18Rik	chr1	protein_coding	RIKEN cDNA 4931428L18 gene
chr1	31242469	31243333	-	31180845	31243333	A3SS	0.2	50	50	ENSMUST00000187659.7	ENSMUSG00000086727.9	4931428L18Rik	chr1	protein_coding	RIKEN cDNA 4931428L18 gene
chr1	31229605	31242412	+	31229605;31236029	31235863;31242412	ES	0.5	50	50	ENSMUST00000062560.14	ENSMUSG00000050217.14	Lgsn	chr1	protein_coding	lengsin, lens protein with glutamine synthetase domain
chr1	32283108	32349879	+	32283108	32372547	A3SS	0.5	50	50	ENSMUST00000027226.12	ENSMUSG00000026058.12	Khdrbs2	chr1	protein_coding	KH domain containing, RNA binding, signal transduction associated 2
chr1	32354189	32372547	+	32283108	32372547	A5SS	0.5	50	50	ENSMUST00000027226.12	ENSMUSG00000026058.12	Khdrbs2	chr1	protein_coding	KH domain containing, RNA binding, signal transduction associated 2
chr1	33572444	33661145	-	33572444	33667476	A5SS	0.5	50	50	ENSMUST00000027312.11	ENSMUSG00000026134.12	Prim2	chr1	protein_coding	DNA primase, p58 subunit
chr1	33759665	33760689	+	33759254	33760689	A5SS	0.5	50	50	ENSMUST00000195006.6	ENSMUSG00000004768.15	Rab23	chr1	protein_coding	RAB23, member RAS oncogene family
chr1	33760780	33762867	+	33760793	33762867	A5SS	0.5	50	50	ENSMUST00000195006.6	ENSMUSG00000004768.15	Rab23	chr1	protein_coding	RAB23, member RAS oncogene family
chr1	33763183	33764015	+	33763086	33764015	A5SS	0.5	50	50	ENSMUST00000140354.8	ENSMUSG00000004768.15	Rab23	chr1	protein_coding	RAB23, member RAS oncogene family
chr1	33786097	33796660	-	33786097;33787407	33787298;33796660	ES	0.5	50	50	ENSMUST00000044691.9	ENSMUSG00000042215.9	Bag2	chr1	protein_coding	BCL2-associated athanogene 2
chr1	33786097	33796660	-	33786097	33787298	5pMXE	0.5	50	50	ENSMUST00000155484.2	ENSMUSG00000042215.9	Bag2	chr1	protein_coding	BCL2-associated athanogene 2
chr1	33822272;33823045	33822883;33844420	-	33822272	33844420	cassetteExon	0.5	100	100	ENSMUST00000139143.8	ENSMUSG00000042197.14	Zfp451	chr1	protein_coding	zinc finger protein 451
chr1	33822272;33823045	33822934;33844420	-	33822272	33844420	cassetteExon	0.5	100	100	ENSMUST00000139143.8	ENSMUSG00000042197.14	Zfp451	chr1	protein_coding	zinc finger protein 451
chr1	33825613	33844420	-	33822272	33844420	A3SS	0.2	50	50	ENSMUST00000139143.8	ENSMUSG00000042197.14	Zfp451	chr1	protein_coding	zinc finger protein 451
chr1	33842694	33844420	-	33822272	33844420	A3SS	0.2	50	50	ENSMUST00000139143.8	ENSMUSG00000042197.14	Zfp451	chr1	protein_coding	zinc finger protein 451
chr1	33852891	33853209	-	33852891	33853419	A5SS	0.5	50	50	ENSMUST00000139143.8	ENSMUSG00000042197.14	Zfp451	chr1	protein_coding	zinc finger protein 451
chr1	33823045	33844420	-	33823045;33825613	33825488;33844420	ES	0.2	50	50	ENSMUST00000019861.13	ENSMUSG00000042197.14	Zfp451	chr1	protein_coding	zinc finger protein 451
chr1	33842694	33844420	-	33825613	33844420	A3SS	0.2	50	50	ENSMUST00000019861.13	ENSMUSG00000042197.14	Zfp451	chr1	protein_coding	zinc finger protein 451
chr1	33822272	33822883	-	33822272	33822934	A5SS	0.33	50	50	ENSMUST00000019861.13	ENSMUSG00000042197.14	Zfp451	chr1	protein_coding	zinc finger protein 451
chr1	33825613	33839216	-	33825613	33844420	A5SS	0.5	50	50	ENSMUST00000019861.13	ENSMUSG00000042197.14	Zfp451	chr1	protein_coding	zinc finger protein 451
chr1	33822272	33844420	-	33819130	33844420	A3SS	0.2	50	50	ENSMUST00000115167.8	ENSMUSG00000042197.14	Zfp451	chr1	protein_coding	zinc finger protein 451
chr1	33823045	33844420	-	33819130	33844420	A3SS	0.2	50	50	ENSMUST00000115167.8	ENSMUSG00000042197.14	Zfp451	chr1	protein_coding	zinc finger protein 451
chr1	33825613	33844420	-	33819130	33844420	A3SS	0.2	50	50	ENSMUST00000115167.8	ENSMUSG00000042197.14	Zfp451	chr1	protein_coding	zinc finger protein 451
chr1	33842694	33844420	-	33819130	33844420	A3SS	0.2	50	50	ENSMUST00000115167.8	ENSMUSG00000042197.14	Zfp451	chr1	protein_coding	zinc finger protein 451
chr1	33819130	33821149	-	33819130	33844420	A5SS	0.5	50	50	ENSMUST00000115167.8	ENSMUSG00000042197.14	Zfp451	chr1	protein_coding	zinc finger protein 451
chr1	33822272	33844420	-	33822272	33822883	5pMXE	0.33	50	50	ENSMUST00000151055.8	ENSMUSG00000042197.14	Zfp451	chr1	protein_coding	zinc finger protein 451
chr1	33842694	33844420	-	33823045	33844420	A3SS	0.2	50	50	ENSMUST00000194656.6	ENSMUSG00000042197.14	Zfp451	chr1	protein_coding	zinc finger protein 451
chr1	33901854	33903604	-	33901854;33903015	33902823;33903604	ES	0.5	50	50	ENSMUST00000115161.8	ENSMUSG00000042182.17	Bend6	chr1	protein_coding	BEN domain containing 6
chr1	33892448;33922729	33922522;33946647	-	33892448;33917518	33901735;33946647	MXE	0.5	100	100	ENSMUST00000115161.8	ENSMUSG00000042182.17	Bend6	chr1	protein_coding	BEN domain containing 6
chr1	33917518;33922729	33922522;33946647	-	33917518	33946647	cassetteExon	0.5	100	100	ENSMUST00000115161.8	ENSMUSG00000042182.17	Bend6	chr1	protein_coding	BEN domain containing 6
chr1	33903655	33917341	-	33903824	33917341	A3SS	0.33	50	50	ENSMUST00000115161.8	ENSMUSG00000042182.17	Bend6	chr1	protein_coding	BEN domain containing 6
chr1	33912992	33917341	-	33903824	33917341	A3SS	0.33	50	50	ENSMUST00000115161.8	ENSMUSG00000042182.17	Bend6	chr1	protein_coding	BEN domain containing 6
chr1	33917518	33922522	-	33892448	33922522	A3SS	0.5	50	50	ENSMUST00000129464.8	ENSMUSG00000042182.17	Bend6	chr1	protein_coding	BEN domain containing 6
chr1	33917518	33946647	-	33922729	33946647	A3SS&ES	0.5	50	50	ENSMUST00000129464.8	ENSMUSG00000042182.17	Bend6	chr1	protein_coding	BEN domain containing 6
chr1	33892448	33901735	-	33892448	33922522	A5SS	0.5	50	50	ENSMUST00000129464.8	ENSMUSG00000042182.17	Bend6	chr1	protein_coding	BEN domain containing 6
chr1	33917518	33946647	-	33917518	33922522	5pMXE	0.5	50	50	ENSMUST00000195350.6	ENSMUSG00000042182.17	Bend6	chr1	protein_coding	BEN domain containing 6
chr1	33912992	33917341	-	33903655	33917341	A3SS	0.33	50	50	ENSMUST00000195350.6	ENSMUSG00000042182.17	Bend6	chr1	protein_coding	BEN domain containing 6
chr1	33901854	33903604	-	33903015	33903604	3pMXE	0.5	50	50	ENSMUST00000126724.8	ENSMUSG00000042182.17	Bend6	chr1	protein_coding	BEN domain containing 6
chr1	34288719	34289691	+	34288719;34289211	34288885;34289691	ES	0.5	50	50	ENSMUST00000183034.5	ENSMUSG00000026131.21	Dst	chr1	protein_coding	dystonin
chr1	34334617	34338802	+	34334617;34335840	34335823;34338802	ES	0.33	50	50	ENSMUST00000183034.5	ENSMUSG00000026131.21	Dst	chr1	protein_coding	dystonin
chr1	34338919	34341911	+	34338919;34341013	34340942;34341911	ES	0.5	50	50	ENSMUST00000183034.5	ENSMUSG00000026131.21	Dst	chr1	protein_coding	dystonin
chr1	34342113	34345609	+	34342113;34342612	34342502;34345609	ES	0.5	50	50	ENSMUST00000183034.5	ENSMUSG00000026131.21	Dst	chr1	protein_coding	dystonin
chr1	34334617;34334764	34334747;34338802	+	34334617;34335840	34335823;34338802	MXE	0.5	100	100	ENSMUST00000183034.5	ENSMUSG00000026131.21	Dst	chr1	protein_coding	dystonin
chr1	34205386	34206020	+	34205386	34206023	A3SS	0.5	50	50	ENSMUST00000183034.5	ENSMUSG00000026131.21	Dst	chr1	protein_coding	dystonin
chr1	34213876	34216877	+	34213876	34223097	A3SS	0.5	50	50	ENSMUST00000183034.5	ENSMUSG00000026131.21	Dst	chr1	protein_coding	dystonin
chr1	34045089	34045272	+	34007984	34045272	A5SS	0.5	50	50	ENSMUST00000183034.5	ENSMUSG00000026131.21	Dst	chr1	protein_coding	dystonin
chr1	34050996	34125323	+	34045479	34125323	A5SS	0.33	50	50	ENSMUST00000183034.5	ENSMUSG00000026131.21	Dst	chr1	protein_coding	dystonin
chr1	34116453	34125323	+	34045479	34125323	A5SS	0.33	50	50	ENSMUST00000183034.5	ENSMUSG00000026131.21	Dst	chr1	protein_coding	dystonin
chr1	34128509	34153014	+	34125384	34153014	A5SS	0.5	50	50	ENSMUST00000183034.5	ENSMUSG00000026131.21	Dst	chr1	protein_coding	dystonin
chr1	34161473	34174171	+	34156605	34174171	A5SS	0.5	50	50	ENSMUST00000183034.5	ENSMUSG00000026131.21	Dst	chr1	protein_coding	dystonin
chr1	34199577	34199701	+	34195989	34199701	A5SS	0.5	50	50	ENSMUST00000183034.5	ENSMUSG00000026131.21	Dst	chr1	protein_coding	dystonin
chr1	34277984	34281700	+	34268327	34281700	A5SS	0.5	50	50	ENSMUST00000183034.5	ENSMUSG00000026131.21	Dst	chr1	protein_coding	dystonin
chr1	34226032	34227053	+	34226032	34236282	A3SS	0.5	50	50	ENSMUST00000097786.10	ENSMUSG00000026131.21	Dst	chr1	protein_coding	dystonin
chr1	34116453	34125323	+	34050996	34125323	A5SS	0.33	50	50	ENSMUST00000097786.10	ENSMUSG00000026131.21	Dst	chr1	protein_coding	dystonin
chr1	34235142	34236282	+	34226032	34236282	A5SS	0.5	50	50	ENSMUST00000097786.10	ENSMUSG00000026131.21	Dst	chr1	protein_coding	dystonin
chr1	34334617	34338802	+	34334617;34334764	34334747;34338802	ES	0.33	50	50	ENSMUST00000115104.10	ENSMUSG00000026131.21	Dst	chr1	protein_coding	dystonin
chr1	34342113	34345609	+	34342113	34342502	3pMXE	0.5	50	50	ENSMUST00000183100.8	ENSMUSG00000026131.21	Dst	chr1	protein_coding	dystonin
chr1	34482776	34483078	+	34482776;34483004	34482850;34483078	ES	0.5	50	50	ENSMUST00000027303.14	ENSMUSG00000026127.14	Imp4	chr1	protein_coding	IMP4, U3 small nucleolar ribonucleoprotein
chr1	34482185	34482459	+	34482074	34482459	A5SS	0.5	50	50	ENSMUST00000027303.14	ENSMUSG00000026127.14	Imp4	chr1	protein_coding	IMP4, U3 small nucleolar ribonucleoprotein
chr1	34482776	34483078	+	34482776	34482850	3pMXE	0.5	50	50	ENSMUST00000137794.8	ENSMUSG00000026127.14	Imp4	chr1	protein_coding	IMP4, U3 small nucleolar ribonucleoprotein
chr1	34502585	34508921	+	34502585;34507442	34507374;34508921	ES	0.5	50	50	ENSMUST00000027302.14	ENSMUSG00000026126.16	Ptpn18	chr1	protein_coding	protein tyrosine phosphatase, non-receptor type 18
chr1	34512490	34514725	+	34512490	34512660	3pMXE	0.5	50	50	ENSMUST00000027302.14	ENSMUSG00000026126.16	Ptpn18	chr1	protein_coding	protein tyrosine phosphatase, non-receptor type 18
chr1	34498925	34501783	+	34498997	34501783	A5SS	0.5	50	50	ENSMUST00000027302.14	ENSMUSG00000026126.16	Ptpn18	chr1	protein_coding	protein tyrosine phosphatase, non-receptor type 18
chr1	34513773	34514725	+	34512490	34514725	A5SS	0.5	50	50	ENSMUST00000188972.3	ENSMUSG00000026126.16	Ptpn18	chr1	protein_coding	protein tyrosine phosphatase, non-receptor type 18
chr1	34510826	34511893	-	34509954	34511893	A3SS	0.5	50	50	ENSMUST00000185218.2	ENSMUSG00000100280.3	Gm28417	chr1	lncRNA	predicted gene 28417
chr1	34523994	34524826	-	34523994	34524586	5pMXE	0.5	50	50	ENSMUST00000188292.7	ENSMUSG00000101223.7	4930568A12Rik	chr1	lncRNA	RIKEN cDNA 4930568A12 gene
chr1	34521844	34523869	-	34519840	34523869	A3SS	0.5	50	50	ENSMUST00000188292.7	ENSMUSG00000101223.7	4930568A12Rik	chr1	lncRNA	RIKEN cDNA 4930568A12 gene
chr1	34538471;34538790	34538725;34539097	+	34538471	34539097	cassetteExon	0.5	100	100	ENSMUST00000027299.10	ENSMUSG00000026125.10	Prss39	chr1	protein_coding	protease, serine 39
chr1	34591774	34595050	-	34583826	34595050	A3SS	0.33	50	50	ENSMUST00000115071.4	ENSMUSG00000037529.14	Prss40	chr1	protein_coding	protease, serine 40
chr1	34591890	34595050	-	34583826	34595050	A3SS	0.33	50	50	ENSMUST00000115071.4	ENSMUSG00000037529.14	Prss40	chr1	protein_coding	protease, serine 40
chr1	34598986	34599811	-	34599015	34599811	A3SS	0.5	50	50	ENSMUST00000115071.4	ENSMUSG00000037529.14	Prss40	chr1	protein_coding	protease, serine 40
chr1	34591890	34595050	-	34591774	34595050	A3SS	0.33	50	50	ENSMUST00000190790.7	ENSMUSG00000037529.14	Prss40	chr1	protein_coding	protease, serine 40
chr1	34845216	34846140	+	34845216;34845575	34845396;34846140	ES	0.5	50	50	ENSMUST00000159747.9	ENSMUSG00000037509.22	Arhgef4	chr1	protein_coding	Rho guanine nucleotide exchange factor (GEF) 4
chr1	34845575	34846105	+	34845575	34846140	A3SS	0.5	50	50	ENSMUST00000159747.9	ENSMUSG00000037509.22	Arhgef4	chr1	protein_coding	Rho guanine nucleotide exchange factor (GEF) 4
chr1	34790104	34832307	+	34784525	34832307	A5SS	0.5	50	50	ENSMUST00000159747.9	ENSMUSG00000037509.22	Arhgef4	chr1	protein_coding	Rho guanine nucleotide exchange factor (GEF) 4
chr1	34841082	34843995	+	34832443	34843995	A5SS	0.5	50	50	ENSMUST00000159747.9	ENSMUSG00000037509.22	Arhgef4	chr1	protein_coding	Rho guanine nucleotide exchange factor (GEF) 4
chr1	34845216	34846140	+	34845216	34845396	3pMXE	0.5	50	50	ENSMUST00000159059.2	ENSMUSG00000037509.22	Arhgef4	chr1	protein_coding	Rho guanine nucleotide exchange factor (GEF) 4
chr1	34859090	34867848	-	34859090;34863136	34863101;34867848	ES	0.25	50	50	ENSMUST00000167518.8	ENSMUSG00000037503.13	Fam168b	chr1	protein_coding	family with sequence similarity 168, member B
chr1	34858871	34858948	-	34858850	34858948	A3SS	0.5	50	50	ENSMUST00000167518.8	ENSMUSG00000037503.13	Fam168b	chr1	protein_coding	family with sequence similarity 168, member B
chr1	34859001	34867848	-	34863136	34867848	A3SS&ES	0.25	50	50	ENSMUST00000167518.8	ENSMUSG00000037503.13	Fam168b	chr1	protein_coding	family with sequence similarity 168, member B
chr1	34859044	34867848	-	34863136	34867848	A3SS&ES	0.25	50	50	ENSMUST00000167518.8	ENSMUSG00000037503.13	Fam168b	chr1	protein_coding	family with sequence similarity 168, member B
chr1	34859001	34867848	-	34859090	34867848	A3SS	0.25	50	50	ENSMUST00000047534.12	ENSMUSG00000037503.13	Fam168b	chr1	protein_coding	family with sequence similarity 168, member B
chr1	34859044	34867848	-	34859090	34867848	A3SS	0.25	50	50	ENSMUST00000047534.12	ENSMUSG00000037503.13	Fam168b	chr1	protein_coding	family with sequence similarity 168, member B
chr1	34859001	34867848	-	34859044	34867848	A3SS	0.25	50	50	ENSMUST00000185469.7	ENSMUSG00000037503.13	Fam168b	chr1	protein_coding	family with sequence similarity 168, member B
chr1	34859090	34881909	-	34875894	34881909	A3SS&ES	0.5	50	50	ENSMUST00000185469.7	ENSMUSG00000037503.13	Fam168b	chr1	protein_coding	family with sequence similarity 168, member B
chr1	34859090	34863101	-	34859090	34881909	A5SS	0.33	50	50	ENSMUST00000185279.2	ENSMUSG00000037503.13	Fam168b	chr1	protein_coding	family with sequence similarity 168, member B
chr1	34859090	34867848	-	34859090	34881909	A5SS	0.33	50	50	ENSMUST00000185279.2	ENSMUSG00000037503.13	Fam168b	chr1	protein_coding	family with sequence similarity 168, member B
chr1	34891058	34900954	+	34889144	34900954	A5SS	0.5	50	50	ENSMUST00000156687.8	ENSMUSG00000026123.12	Plekhb2	chr1	protein_coding	pleckstrin homology domain containing, family B (evectins) member 2
chr1	36042487	36043008	-	36042487	36042895	A5SS	0.5	50	50	ENSMUST00000193725.2	ENSMUSG00000103708.2	Gm33222	chr1	lncRNA	predicted gene, 33222
chr1	36043072	36049965	-	36043072	36050072	A5SS	0.5	50	50	ENSMUST00000193725.2	ENSMUSG00000103708.2	Gm33222	chr1	lncRNA	predicted gene, 33222
chr1	36203604	36209280	-	36203604;36204692	36204590;36209280	ES	0.5	50	50	ENSMUST00000046875.14	ENSMUSG00000037470.15	Uggt1	chr1	protein_coding	UDP-glucose glycoprotein glucosyltransferase 1
chr1	36215408	36216599	-	36215408;36215880	36215857;36216599	ES	0.5	50	50	ENSMUST00000046875.14	ENSMUSG00000037470.15	Uggt1	chr1	protein_coding	UDP-glucose glycoprotein glucosyltransferase 1
chr1	36213211	36213977	-	36213291	36213977	A3SS	0.5	50	50	ENSMUST00000046875.14	ENSMUSG00000037470.15	Uggt1	chr1	protein_coding	UDP-glucose glycoprotein glucosyltransferase 1
chr1	36249145	36250478	-	36249145	36250471	A5SS	0.5	50	50	ENSMUST00000046875.14	ENSMUSG00000037470.15	Uggt1	chr1	protein_coding	UDP-glucose glycoprotein glucosyltransferase 1
chr1	36203604	36209280	-	36203604	36204590	5pMXE	0.5	50	50	ENSMUST00000173999.8	ENSMUSG00000037470.15	Uggt1	chr1	protein_coding	UDP-glucose glycoprotein glucosyltransferase 1
chr1	36241959	36247023	-	36236716	36247023	A3SS	0.5	50	50	ENSMUST00000174142.2	ENSMUSG00000037470.15	Uggt1	chr1	protein_coding	UDP-glucose glycoprotein glucosyltransferase 1
chr1	36236716	36240786	-	36236716	36247023	A5SS	0.5	50	50	ENSMUST00000174142.2	ENSMUSG00000037470.15	Uggt1	chr1	protein_coding	UDP-glucose glycoprotein glucosyltransferase 1
chr1	36355408	36356691	+	36355408;36356405	36356285;36356691	ES	0.5	50	50	ENSMUST00000126413.8	ENSMUSG00000037447.17	Arid5a	chr1	protein_coding	AT rich interactive domain 5A (MRF1-like)
chr1	36346917	36350955	+	36346917	36355293	A3SS	0.25	50	50	ENSMUST00000126413.8	ENSMUSG00000037447.17	Arid5a	chr1	protein_coding	AT rich interactive domain 5A (MRF1-like)
chr1	36346917	36355290	+	36346917	36355293	A3SS	0.25	50	50	ENSMUST00000126413.8	ENSMUSG00000037447.17	Arid5a	chr1	protein_coding	AT rich interactive domain 5A (MRF1-like)
chr1	36355408	36356691	+	36355408	36356285	3pMXE	0.33	50	50	ENSMUST00000142319.8	ENSMUSG00000037447.17	Arid5a	chr1	protein_coding	AT rich interactive domain 5A (MRF1-like)
chr1	36355408	36357165	+	36355408	36356285	3pMXE	0.33	50	50	ENSMUST00000142319.8	ENSMUSG00000037447.17	Arid5a	chr1	protein_coding	AT rich interactive domain 5A (MRF1-like)
chr1	36346917;36351049	36350955;36355290	+	36346917	36355290	cassetteExon	0.5	100	100	ENSMUST00000142319.8	ENSMUSG00000037447.17	Arid5a	chr1	protein_coding	AT rich interactive domain 5A (MRF1-like)
chr1	36346917	36357165	+	36346917;36355408	36355290;36357165	ES	0.33	50	50	ENSMUST00000150747.8	ENSMUSG00000037447.17	Arid5a	chr1	protein_coding	AT rich interactive domain 5A (MRF1-like)
chr1	36355408;36356743	36356285;36357165	+	36355408	36357165	cassetteExon	0.5	100	100	ENSMUST00000150747.8	ENSMUSG00000037447.17	Arid5a	chr1	protein_coding	AT rich interactive domain 5A (MRF1-like)
chr1	36355408;36356743	36356691;36357165	+	36355408	36357165	cassetteExon	0.5	100	100	ENSMUST00000150747.8	ENSMUSG00000037447.17	Arid5a	chr1	protein_coding	AT rich interactive domain 5A (MRF1-like)
chr1	36346917	36357165	+	36346917	36355290	A3SS	0.25	50	50	ENSMUST00000124280.8	ENSMUSG00000037447.17	Arid5a	chr1	protein_coding	AT rich interactive domain 5A (MRF1-like)
chr1	36346917;36355408	36355293;36357165	+	36346917	36357165	cassetteExon	0.5	100	100	ENSMUST00000115029.2	ENSMUSG00000037447.17	Arid5a	chr1	protein_coding	AT rich interactive domain 5A (MRF1-like)
chr1	36346917	36350955	+	36346917	36357165	A3SS	0.25	50	50	ENSMUST00000115029.2	ENSMUSG00000037447.17	Arid5a	chr1	protein_coding	AT rich interactive domain 5A (MRF1-like)
chr1	36356743	36357165	+	36346917	36357165	A5SS	0.33	50	50	ENSMUST00000115029.2	ENSMUSG00000037447.17	Arid5a	chr1	protein_coding	AT rich interactive domain 5A (MRF1-like)
chr1	36346917	36357165	+	36346917	36355293	3pMXE	0.25	50	50	ENSMUST00000140218.2	ENSMUSG00000037447.17	Arid5a	chr1	protein_coding	AT rich interactive domain 5A (MRF1-like)
chr1	36355408	36356691	+	36356405	36356691	5pMXE	0.5	50	50	ENSMUST00000141121.2	ENSMUSG00000037447.17	Arid5a	chr1	protein_coding	AT rich interactive domain 5A (MRF1-like)
chr1	36385110;36386375	36386298;36387606	-	36385110	36387606	cassetteExon	0.5	100	100	ENSMUST00000185912.7	ENSMUSG00000010453.13	Kansl3	chr1	protein_coding	KAT8 regulatory NSL complex subunit 3
chr1	36404733	36406831	-	36404725	36406831	A3SS	0.5	50	50	ENSMUST00000185912.7	ENSMUSG00000010453.13	Kansl3	chr1	protein_coding	KAT8 regulatory NSL complex subunit 3
chr1	36407115	36408186	-	36406992	36408186	A3SS	0.5	50	50	ENSMUST00000185912.7	ENSMUSG00000010453.13	Kansl3	chr1	protein_coding	KAT8 regulatory NSL complex subunit 3
chr1	36404666	36406850	-	36404733	36406850	A3SS	0.25	50	50	ENSMUST00000010597.10	ENSMUSG00000010453.13	Kansl3	chr1	protein_coding	KAT8 regulatory NSL complex subunit 3
chr1	36404713	36406850	-	36404733	36406850	A3SS	0.25	50	50	ENSMUST00000010597.10	ENSMUSG00000010453.13	Kansl3	chr1	protein_coding	KAT8 regulatory NSL complex subunit 3
chr1	36404771	36406850	-	36404733	36406850	A3SS	0.25	50	50	ENSMUST00000010597.10	ENSMUSG00000010453.13	Kansl3	chr1	protein_coding	KAT8 regulatory NSL complex subunit 3
chr1	36404733	36406831	-	36404733	36406850	A5SS	0.5	50	50	ENSMUST00000010597.10	ENSMUSG00000010453.13	Kansl3	chr1	protein_coding	KAT8 regulatory NSL complex subunit 3
chr1	36407115	36408086	-	36407115	36408186	A5SS	0.5	50	50	ENSMUST00000010597.10	ENSMUSG00000010453.13	Kansl3	chr1	protein_coding	KAT8 regulatory NSL complex subunit 3
chr1	36404666	36406850	-	36404713	36406850	A3SS	0.25	50	50	ENSMUST00000188528.7	ENSMUSG00000010453.13	Kansl3	chr1	protein_coding	KAT8 regulatory NSL complex subunit 3
chr1	36404771	36406850	-	36404713	36406850	A3SS	0.25	50	50	ENSMUST00000188528.7	ENSMUSG00000010453.13	Kansl3	chr1	protein_coding	KAT8 regulatory NSL complex subunit 3
chr1	36404771	36406850	-	36404666	36406850	A3SS	0.25	50	50	ENSMUST00000185621.3	ENSMUSG00000010453.13	Kansl3	chr1	protein_coding	KAT8 regulatory NSL complex subunit 3
chr1	36431561	36440397	+	36431561	36440435	A3SS	0.5	50	50	ENSMUST00000179162.7	ENSMUSG00000037432.16	Fer1l5	chr1	protein_coding	fer-1-like 5 (C. elegans)
chr1	36458849	36459092	+	36458849	36459060	A3SS	0.5	50	50	ENSMUST00000179162.7	ENSMUSG00000037432.16	Fer1l5	chr1	protein_coding	fer-1-like 5 (C. elegans)
chr1	36460014	36460208	+	36460044	36460208	A5SS	0.5	50	50	ENSMUST00000179162.7	ENSMUSG00000037432.16	Fer1l5	chr1	protein_coding	fer-1-like 5 (C. elegans)
chr1	36467542	36478690	-	36467542;36477913	36477831;36478690	ES	0.5	50	50	ENSMUST00000192969.6	ENSMUSG00000001143.14	Lman2l	chr1	protein_coding	lectin, mannose-binding 2-like
chr1	36467542;36468536	36468504;36477831	-	36467542	36477831	cassetteExon	0.5	100	100	ENSMUST00000192969.6	ENSMUSG00000001143.14	Lman2l	chr1	protein_coding	lectin, mannose-binding 2-like
chr1	36463584	36463919	-	36459116	36463919	A3SS	0.5	50	50	ENSMUST00000192969.6	ENSMUSG00000001143.14	Lman2l	chr1	protein_coding	lectin, mannose-binding 2-like
chr1	36482690;36483223	36483118;36484131	-	36482690	36484131	cassetteExon	0.5	100	100	ENSMUST00000125304.8	ENSMUSG00000001143.14	Lman2l	chr1	protein_coding	lectin, mannose-binding 2-like
chr1	36478807	36482601	-	36478807	36482572	A5SS	0.5	50	50	ENSMUST00000125304.8	ENSMUSG00000001143.14	Lman2l	chr1	protein_coding	lectin, mannose-binding 2-like
chr1	36467542	36468504	-	36467542	36478690	A5SS	0.33	50	50	ENSMUST00000001171.13	ENSMUSG00000001143.14	Lman2l	chr1	protein_coding	lectin, mannose-binding 2-like
chr1	36560920;36563213	36563115;36564247	+	36560920	36564247	cassetteExon	0.5	100	100	ENSMUST00000001166.14	ENSMUSG00000001138.14	Cnnm3	chr1	protein_coding	cyclin M3
chr1	36570902	36571193	-	36570902;36571088	36570990;36571193	ES	0.33	50	50	ENSMUST00000193083.6	ENSMUSG00000067653.13	Ankrd23	chr1	protein_coding	ankyrin repeat domain 23
chr1	36573518	36578438	-	36573518	36575578	5pMXE	0.33	50	50	ENSMUST00000193083.6	ENSMUSG00000067653.13	Ankrd23	chr1	protein_coding	ankyrin repeat domain 23
chr1	36573518	36574763	-	36573518	36575578	A5SS	0.33	50	50	ENSMUST00000193083.6	ENSMUSG00000067653.13	Ankrd23	chr1	protein_coding	ankyrin repeat domain 23
chr1	36573518	36578438	-	36573518	36574763	5pMXE	0.33	50	50	ENSMUST00000054665.10	ENSMUSG00000067653.13	Ankrd23	chr1	protein_coding	ankyrin repeat domain 23
chr1	36570722	36571193	-	36570722;36570902	36570804;36571193	ES	0.33	50	50	ENSMUST00000194853.3	ENSMUSG00000067653.13	Ankrd23	chr1	protein_coding	ankyrin repeat domain 23
chr1	36570722;36571088	36570804;36571193	-	36570722	36571193	cassetteExon	0.5	100	100	ENSMUST00000191849.6	ENSMUSG00000109510.2	Gm42417	chr1	protein_coding	predicted gene, 42417
chr1	36578615	36580905	-	36578615	36580940	A5SS	0.5	50	50	ENSMUST00000207843.2	ENSMUSG00000079610.10	Ankrd39	chr1	protein_coding	ankyrin repeat domain 39
chr1	36581946	36586167	-	36581946	36585991	A5SS	0.5	50	50	ENSMUST00000207843.2	ENSMUSG00000079610.10	Ankrd39	chr1	protein_coding	ankyrin repeat domain 39
chr1	36595161;36596010	36595884;36597097	-	36595161	36597097	cassetteExon	0.5	100	100	ENSMUST00000191677.6	ENSMUSG00000026121.14	Sema4c	chr1	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
chr1	36593484	36595013	-	36593481	36595013	A3SS	0.5	50	50	ENSMUST00000191677.6	ENSMUSG00000026121.14	Sema4c	chr1	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
chr1	36595158	36597097	-	36595161	36597097	A3SS	0.33	50	50	ENSMUST00000191677.6	ENSMUSG00000026121.14	Sema4c	chr1	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
chr1	36595161	36596441	-	36595161	36597097	A5SS	0.33	50	50	ENSMUST00000191677.6	ENSMUSG00000026121.14	Sema4c	chr1	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
chr1	36595161	36596441	-	36595161;36596166	36595884;36596441	ES	0.33	50	50	ENSMUST00000191642.6	ENSMUSG00000026121.14	Sema4c	chr1	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
chr1	36595158	36595884	-	36595161	36595884	A3SS	0.5	50	50	ENSMUST00000191642.6	ENSMUSG00000026121.14	Sema4c	chr1	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
chr1	36596010	36596441	-	36596166	36596441	A3SS	0.33	50	50	ENSMUST00000191642.6	ENSMUSG00000026121.14	Sema4c	chr1	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
chr1	36595161;36596010	36595884;36596441	-	36595161	36596441	cassetteExon	0.5	100	100	ENSMUST00000195620.6	ENSMUSG00000026121.14	Sema4c	chr1	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
chr1	36595158;36596010	36595884;36597097	-	36595158	36597097	cassetteExon	0.5	100	100	ENSMUST00000114991.8	ENSMUSG00000026121.14	Sema4c	chr1	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
chr1	36596010	36597097	-	36596010	36596441	5pMXE	0.5	50	50	ENSMUST00000193382.6	ENSMUSG00000026121.14	Sema4c	chr1	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
chr1	36595161	36596441	-	36596010	36596441	A3SS&ES	0.33	50	50	ENSMUST00000193382.6	ENSMUSG00000026121.14	Sema4c	chr1	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
chr1	36595161	36597097	-	36596010	36597097	A3SS&ES	0.33	50	50	ENSMUST00000195339.3	ENSMUSG00000026121.14	Sema4c	chr1	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
chr1	36625084	36639489	-	36625084;36639301	36639204;36639489	ES	0.5	50	50	ENSMUST00000170295.8	ENSMUSG00000046337.18	Fam178b	chr1	protein_coding	family with sequence similarity 178, member B
chr1	36615889	36617600	-	36603989	36617600	A3SS	0.5	50	50	ENSMUST00000170295.8	ENSMUSG00000046337.18	Fam178b	chr1	protein_coding	family with sequence similarity 178, member B
chr1	36625084	36628318	-	36625084	36639204	A5SS	0.25	50	50	ENSMUST00000170295.8	ENSMUSG00000046337.18	Fam178b	chr1	protein_coding	family with sequence similarity 178, member B
chr1	36625084	36632279	-	36625084	36639204	A5SS	0.25	50	50	ENSMUST00000170295.8	ENSMUSG00000046337.18	Fam178b	chr1	protein_coding	family with sequence similarity 178, member B
chr1	36625084	36632279	-	36625084	36628318	5pMXE	0.25	50	50	ENSMUST00000193548.6	ENSMUSG00000046337.18	Fam178b	chr1	protein_coding	family with sequence similarity 178, member B
chr1	36625084	36639489	-	36625084	36628318	5pMXE	0.25	50	50	ENSMUST00000193548.6	ENSMUSG00000046337.18	Fam178b	chr1	protein_coding	family with sequence similarity 178, member B
chr1	36625084	36639489	-	36625084	36632279	5pMXE	0.25	50	50	ENSMUST00000193763.6	ENSMUSG00000046337.18	Fam178b	chr1	protein_coding	family with sequence similarity 178, member B
chr1	36625084	36639489	-	36639301	36639489	3pMXE	0.5	50	50	ENSMUST00000114981.3	ENSMUSG00000046337.18	Fam178b	chr1	protein_coding	family with sequence similarity 178, member B
chr1	36731365	36732278	+	36731365;36731631	36731512;36732278	ES	0.5	50	50	ENSMUST00000081180.7	ENSMUSG00000061518.12	Cox5b	chr1	protein_coding	cytochrome c oxidase subunit 5B
chr1	36730770	36731339	+	36730770	36731292	A3SS	0.5	50	50	ENSMUST00000081180.7	ENSMUSG00000061518.12	Cox5b	chr1	protein_coding	cytochrome c oxidase subunit 5B
chr1	36731365	36731532	+	36731365	36731512	A3SS	0.33	50	50	ENSMUST00000081180.7	ENSMUSG00000061518.12	Cox5b	chr1	protein_coding	cytochrome c oxidase subunit 5B
chr1	36731365	36732278	+	36731365;36731631	36731532;36732278	ES	0.5	50	50	ENSMUST00000193210.6	ENSMUSG00000061518.12	Cox5b	chr1	protein_coding	cytochrome c oxidase subunit 5B
chr1	36731365	36732278	+	36731365	36731532	3pMXE	0.33	50	50	ENSMUST00000191790.6	ENSMUSG00000061518.12	Cox5b	chr1	protein_coding	cytochrome c oxidase subunit 5B
chr1	36745729	36745951	-	36741681	36745951	A3SS	0.5	50	50	ENSMUST00000043951.10	ENSMUSG00000037351.10	Actr1b	chr1	protein_coding	ARP1 actin-related protein 1B, centractin beta
chr1	36747336	36748648	-	36747336	36748887	A5SS	0.5	50	50	ENSMUST00000043951.10	ENSMUSG00000037351.10	Actr1b	chr1	protein_coding	ARP1 actin-related protein 1B, centractin beta
chr1	36747336	36748887	-	36741681	36748887	A3SS	0.5	50	50	ENSMUST00000162684.3	ENSMUSG00000037351.10	Actr1b	chr1	protein_coding	ARP1 actin-related protein 1B, centractin beta
chr1	36741681	36745951	-	36741681	36748887	A5SS	0.5	50	50	ENSMUST00000162684.3	ENSMUSG00000037351.10	Actr1b	chr1	protein_coding	ARP1 actin-related protein 1B, centractin beta
chr1	36746026	36747272	-	36746026	36752820	A5SS	0.5	50	50	ENSMUST00000160084.2	ENSMUSG00000037351.10	Actr1b	chr1	protein_coding	ARP1 actin-related protein 1B, centractin beta
chr1	36753778	36757903	+	36749572	36757903	A5SS	0.5	50	50	ENSMUST00000192873.3	ENSMUSG00000102416.5	4933424G06Rik	chr1	protein_coding	RIKEN cDNA 4933424G06 gene
chr1	36783475	36783592	+	36781457	36783592	A5SS	0.5	50	50	ENSMUST00000208994.2	ENSMUSG00000102416.5	4933424G06Rik	chr1	protein_coding	RIKEN cDNA 4933424G06 gene
chr1	36806202	36809883	+	36801023	36809883	A5SS	0.5	50	50	ENSMUST00000027291.7	ENSMUSG00000026117.11	Zap70	chr1	protein_coding	zeta-chain (TCR) associated protein kinase
chr1	36928406	36982492	-	36928406	36978246	5pMXE	0.5	50	50	ENSMUST00000027290.12	ENSMUSG00000026116.12	Tmem131	chr1	protein_coding	transmembrane protein 131
chr1	36862234;36863669	36863486;36863797	-	36862234	36863797	cassetteExon	0.5	100	100	ENSMUST00000027290.12	ENSMUSG00000026116.12	Tmem131	chr1	protein_coding	transmembrane protein 131
chr1	36853498	36854536	-	36851789	36854536	A3SS	0.5	50	50	ENSMUST00000027290.12	ENSMUSG00000026116.12	Tmem131	chr1	protein_coding	transmembrane protein 131
chr1	36855343	36857739	-	36855328	36857739	A3SS	0.5	50	50	ENSMUST00000027290.12	ENSMUSG00000026116.12	Tmem131	chr1	protein_coding	transmembrane protein 131
chr1	37102630	37124314	+	37102630	37115448	3pMXE	0.5	50	50	ENSMUST00000117172.9	ENSMUSG00000050122.20	Vwa3b	chr1	protein_coding	von Willebrand factor A domain containing 3B
chr1	37068509	37074789	+	37065726	37074789	A5SS	0.5	50	50	ENSMUST00000117172.9	ENSMUSG00000050122.20	Vwa3b	chr1	protein_coding	von Willebrand factor A domain containing 3B
chr1	37068509	37074789	+	37068509	37074718	A3SS	0.5	50	50	ENSMUST00000124404.8	ENSMUSG00000050122.20	Vwa3b	chr1	protein_coding	von Willebrand factor A domain containing 3B
chr1	37139907	37153542	+	37139907;37148231	37148077;37153542	ES	0.5	50	50	ENSMUST00000238425.2	ENSMUSG00000050122.20	Vwa3b	chr1	protein_coding	von Willebrand factor A domain containing 3B
chr1	37174646	37180172	+	37174646;37176968	37176811;37180172	ES	0.5	50	50	ENSMUST00000238425.2	ENSMUSG00000050122.20	Vwa3b	chr1	protein_coding	von Willebrand factor A domain containing 3B
chr1	37193124	37196414	+	37182148	37196414	A5SS	0.5	50	50	ENSMUST00000238425.2	ENSMUSG00000050122.20	Vwa3b	chr1	protein_coding	von Willebrand factor A domain containing 3B
chr1	37139907	37153542	+	37139907	37148077	3pMXE	0.5	50	50	ENSMUST00000194890.2	ENSMUSG00000050122.20	Vwa3b	chr1	protein_coding	von Willebrand factor A domain containing 3B
chr1	37257522	37271290	+	37257522;37258619	37258509;37271290	ES	0.5	50	50	ENSMUST00000191981.6	ENSMUSG00000026114.15	Cnga3	chr1	protein_coding	cyclic nucleotide gated channel alpha 3
chr1	37271426	37283914	+	37271426	37280908	3pMXE	0.5	50	50	ENSMUST00000191981.6	ENSMUSG00000026114.15	Cnga3	chr1	protein_coding	cyclic nucleotide gated channel alpha 3
chr1	37271426	37283914	+	37271426;37281021	37280908;37283914	ES	0.5	50	50	ENSMUST00000195272.6	ENSMUSG00000026114.15	Cnga3	chr1	protein_coding	cyclic nucleotide gated channel alpha 3
chr1	37257522	37271290	+	37258619	37271290	5pMXE	0.5	50	50	ENSMUST00000027288.10	ENSMUSG00000026114.15	Cnga3	chr1	protein_coding	cyclic nucleotide gated channel alpha 3
chr1	37339199	37396424	+	37339199	37387479	3pMXE	0.5	50	50	ENSMUST00000146676.2	ENSMUSG00000026113.18	Inpp4a	chr1	protein_coding	inositol polyphosphate-4-phosphatase, type I
chr1	37411500	37416659	+	37411500;37413370	37413353;37416659	ES	0.33	50	50	ENSMUST00000027287.11	ENSMUSG00000026113.18	Inpp4a	chr1	protein_coding	inositol polyphosphate-4-phosphatase, type I
chr1	37419141	37426779	+	37419141;37422452	37422420;37426779	ES	0.5	50	50	ENSMUST00000027287.11	ENSMUSG00000026113.18	Inpp4a	chr1	protein_coding	inositol polyphosphate-4-phosphatase, type I
chr1	37411500	37411674	+	37411500	37413353	A3SS	0.25	50	50	ENSMUST00000027287.11	ENSMUSG00000026113.18	Inpp4a	chr1	protein_coding	inositol polyphosphate-4-phosphatase, type I
chr1	37411500	37413356	+	37411500	37413353	A3SS	0.25	50	50	ENSMUST00000027287.11	ENSMUSG00000026113.18	Inpp4a	chr1	protein_coding	inositol polyphosphate-4-phosphatase, type I
chr1	37438001	37442530	+	37438001	37447208	A3SS	0.5	50	50	ENSMUST00000027287.11	ENSMUSG00000026113.18	Inpp4a	chr1	protein_coding	inositol polyphosphate-4-phosphatase, type I
chr1	37339507	37396424	+	37339199	37396424	A5SS	0.5	50	50	ENSMUST00000027287.11	ENSMUSG00000026113.18	Inpp4a	chr1	protein_coding	inositol polyphosphate-4-phosphatase, type I
chr1	37416609	37416659	+	37413370	37416659	A5SS	0.33	50	50	ENSMUST00000027287.11	ENSMUSG00000026113.18	Inpp4a	chr1	protein_coding	inositol polyphosphate-4-phosphatase, type I
chr1	37419258	37422420	+	37419141	37422420	A5SS	0.5	50	50	ENSMUST00000027287.11	ENSMUSG00000026113.18	Inpp4a	chr1	protein_coding	inositol polyphosphate-4-phosphatase, type I
chr1	37411500;37413370	37413356;37416659	+	37411500	37416659	cassetteExon	0.5	100	100	ENSMUST00000140264.8	ENSMUSG00000026113.18	Inpp4a	chr1	protein_coding	inositol polyphosphate-4-phosphatase, type I
chr1	37411500	37411674	+	37411500	37416659	A3SS	0.25	50	50	ENSMUST00000140264.8	ENSMUSG00000026113.18	Inpp4a	chr1	protein_coding	inositol polyphosphate-4-phosphatase, type I
chr1	37416609	37416659	+	37411500	37416659	A5SS	0.33	50	50	ENSMUST00000140264.8	ENSMUSG00000026113.18	Inpp4a	chr1	protein_coding	inositol polyphosphate-4-phosphatase, type I
chr1	37419141	37426779	+	37422452	37426779	A5SS&ES	0.5	50	50	ENSMUST00000132401.8	ENSMUSG00000026113.18	Inpp4a	chr1	protein_coding	inositol polyphosphate-4-phosphatase, type I
chr1	37411500	37411674	+	37411500	37413356	A3SS	0.25	50	50	ENSMUST00000136846.8	ENSMUSG00000026113.18	Inpp4a	chr1	protein_coding	inositol polyphosphate-4-phosphatase, type I
chr1	37411500;37413370	37413353;37416659	+	37411500;37416609	37411674;37416659	MXE	0.5	100	100	ENSMUST00000168546.3	ENSMUSG00000026113.18	Inpp4a	chr1	protein_coding	inositol polyphosphate-4-phosphatase, type I
chr1	37411500;37413370	37413356;37416659	+	37411500;37416609	37411674;37416659	MXE	0.5	100	100	ENSMUST00000168546.3	ENSMUSG00000026113.18	Inpp4a	chr1	protein_coding	inositol polyphosphate-4-phosphatase, type I
chr1	37469363	37470378	+	37469363	37470374	A3SS	0.5	50	50	ENSMUST00000114925.10	ENSMUSG00000026111.16	Unc50	chr1	protein_coding	unc-50 homolog
chr1	37469418	37470374	+	37469363	37470374	A5SS	0.25	50	50	ENSMUST00000114925.10	ENSMUSG00000026111.16	Unc50	chr1	protein_coding	unc-50 homolog
chr1	37469508	37470374	+	37469363	37470374	A5SS	0.25	50	50	ENSMUST00000114925.10	ENSMUSG00000026111.16	Unc50	chr1	protein_coding	unc-50 homolog
chr1	37469574	37470374	+	37469363	37470374	A5SS	0.25	50	50	ENSMUST00000114925.10	ENSMUSG00000026111.16	Unc50	chr1	protein_coding	unc-50 homolog
chr1	37469574	37470378	+	37469574	37470374	A3SS	0.5	50	50	ENSMUST00000027285.13	ENSMUSG00000026111.16	Unc50	chr1	protein_coding	unc-50 homolog
chr1	37469418	37470374	+	37469574	37470374	A5SS	0.25	50	50	ENSMUST00000027285.13	ENSMUSG00000026111.16	Unc50	chr1	protein_coding	unc-50 homolog
chr1	37469508	37470374	+	37469574	37470374	A5SS	0.25	50	50	ENSMUST00000027285.13	ENSMUSG00000026111.16	Unc50	chr1	protein_coding	unc-50 homolog
chr1	37469508	37470374	+	37469418	37470374	A5SS	0.25	50	50	ENSMUST00000144617.8	ENSMUSG00000026111.16	Unc50	chr1	protein_coding	unc-50 homolog
chr1	37469363	37470378	+	37469574	37470378	A5SS	0.5	50	50	ENSMUST00000193979.6	ENSMUSG00000026111.16	Unc50	chr1	protein_coding	unc-50 homolog
chr1	37505660	37529341	-	37505664	37529341	A3SS	0.5	50	50	ENSMUST00000042161.15	ENSMUSG00000026110.16	Mgat4a	chr1	protein_coding	mannoside acetylglucosaminyltransferase 4, isoenzyme A
chr1	37529474	37535137	-	37529474	37534954	A5SS&ES	0.5	50	50	ENSMUST00000042161.15	ENSMUSG00000026110.16	Mgat4a	chr1	protein_coding	mannoside acetylglucosaminyltransferase 4, isoenzyme A
chr1	37535094	37537681	-	37535094	37537654	A5SS	0.5	50	50	ENSMUST00000042161.15	ENSMUSG00000026110.16	Mgat4a	chr1	protein_coding	mannoside acetylglucosaminyltransferase 4, isoenzyme A
chr1	37651477	37652418	-	37651480	37652418	A3SS	0.5	50	50	ENSMUST00000160023.6	ENSMUSG00000026090.17	Cracdl	chr1	protein_coding	capping protein inhibiting regulator of actin like
chr1	37683721;37715860	37715423;37758651	-	37683721	37758651	cassetteExon	0.5	100	100	ENSMUST00000162875.8	ENSMUSG00000026090.17	Cracdl	chr1	protein_coding	capping protein inhibiting regulator of actin like
chr1	37802590	37840801	-	37802590;37823107	37822898;37840801	ES	0.5	50	50	ENSMUST00000041815.15	ENSMUSG00000060771.16	Tsga10	chr1	protein_coding	testis specific 10
chr1	37850108	37858606	-	37850108;37854767	37854613;37858606	ES	0.5	50	50	ENSMUST00000041815.15	ENSMUSG00000060771.16	Tsga10	chr1	protein_coding	testis specific 10
chr1	37894454	37904187	-	37894454	37904104	5pMXE	0.33	50	50	ENSMUST00000041815.15	ENSMUSG00000060771.16	Tsga10	chr1	protein_coding	testis specific 10
chr1	37880389	37881536	-	37880433	37881536	A3SS	0.5	50	50	ENSMUST00000041815.15	ENSMUSG00000060771.16	Tsga10	chr1	protein_coding	testis specific 10
chr1	37894454	37903807	-	37894454	37904104	A5SS	0.33	50	50	ENSMUST00000041815.15	ENSMUSG00000060771.16	Tsga10	chr1	protein_coding	testis specific 10
chr1	37894454	37904187	-	37894454	37903807	5pMXE	0.33	50	50	ENSMUST00000239367.2	ENSMUSG00000060771.16	Tsga10	chr1	protein_coding	testis specific 10
chr1	37858721	37873267	-	37846186	37873267	A3SS	0.5	50	50	ENSMUST00000239367.2	ENSMUSG00000060771.16	Tsga10	chr1	protein_coding	testis specific 10
chr1	37846186	37850053	-	37846186	37873267	A5SS	0.5	50	50	ENSMUST00000239367.2	ENSMUSG00000060771.16	Tsga10	chr1	protein_coding	testis specific 10
chr1	37911406	37913945	+	37911112	37913945	A5SS	0.25	50	50	ENSMUST00000128085.2	ENSMUSG00000037216.6	Lipt1	chr1	protein_coding	lipoyltransferase 1
chr1	37911669	37913945	+	37911112	37913945	A5SS	0.25	50	50	ENSMUST00000128085.2	ENSMUSG00000037216.6	Lipt1	chr1	protein_coding	lipoyltransferase 1
chr1	37911726	37913945	+	37911112	37913945	A5SS	0.25	50	50	ENSMUST00000128085.2	ENSMUSG00000037216.6	Lipt1	chr1	protein_coding	lipoyltransferase 1
chr1	37911669	37913945	+	37911406	37913945	A5SS	0.25	50	50	ENSMUST00000041621.5	ENSMUSG00000037216.6	Lipt1	chr1	protein_coding	lipoyltransferase 1
chr1	37911726	37913945	+	37911406	37913945	A5SS	0.25	50	50	ENSMUST00000041621.5	ENSMUSG00000037216.6	Lipt1	chr1	protein_coding	lipoyltransferase 1
chr1	37911726	37913945	+	37911669	37913945	A5SS	0.25	50	50	ENSMUST00000142670.2	ENSMUSG00000037216.6	Lipt1	chr1	protein_coding	lipoyltransferase 1
chr1	37929665	37933020	+	37929665;37932104	37932024;37933020	ES	0.5	50	50	ENSMUST00000027256.12	ENSMUSG00000026087.12	Mrpl30	chr1	protein_coding	mitochondrial ribosomal protein L30
chr1	37931253	37932024	+	37929665	37932024	A5SS	0.5	50	50	ENSMUST00000027256.12	ENSMUSG00000026087.12	Mrpl30	chr1	protein_coding	mitochondrial ribosomal protein L30
chr1	37929665	37933020	+	37929665	37932024	3pMXE	0.5	50	50	ENSMUST00000161694.2	ENSMUSG00000026087.12	Mrpl30	chr1	protein_coding	mitochondrial ribosomal protein L30
chr1	37929665	37933020	+	37932104	37933020	A5SS&ES	0.5	50	50	ENSMUST00000160082.3	ENSMUSG00000026087.12	Mrpl30	chr1	protein_coding	mitochondrial ribosomal protein L30
chr1	37986390	37988877	-	37986390	37987996	5pMXE	0.5	50	50	ENSMUST00000144184.2	ENSMUSG00000026085.12	Lyg1	chr1	protein_coding	lysozyme G-like 1
chr1	38026860	38033073	-	38026860;38029538	38029284;38033073	ES	0.5	50	50	ENSMUST00000162031.8	ENSMUSG00000058407.13	Txndc9	chr1	protein_coding	thioredoxin domain containing 9
chr1	38034922	38035570	-	38034922	38036190	A5SS	0.25	50	50	ENSMUST00000162031.8	ENSMUSG00000058407.13	Txndc9	chr1	protein_coding	thioredoxin domain containing 9
chr1	38034922	38035974	-	38034922	38036190	A5SS	0.25	50	50	ENSMUST00000162031.8	ENSMUSG00000058407.13	Txndc9	chr1	protein_coding	thioredoxin domain containing 9
chr1	38034922	38036245	-	38034922	38036190	A5SS	0.25	50	50	ENSMUST00000162031.8	ENSMUSG00000058407.13	Txndc9	chr1	protein_coding	thioredoxin domain containing 9
chr1	38026860	38033073	-	38029538	38033073	A3SS	0.5	50	50	ENSMUST00000193832.6	ENSMUSG00000058407.13	Txndc9	chr1	protein_coding	thioredoxin domain containing 9
chr1	38034922	38035570	-	38034922	38036245	A5SS	0.25	50	50	ENSMUST00000193832.6	ENSMUSG00000058407.13	Txndc9	chr1	protein_coding	thioredoxin domain containing 9
chr1	38034922	38035974	-	38034922	38036245	A5SS	0.25	50	50	ENSMUST00000193832.6	ENSMUSG00000058407.13	Txndc9	chr1	protein_coding	thioredoxin domain containing 9
chr1	38034922	38035570	-	38034922	38035974	A5SS	0.25	50	50	ENSMUST00000195032.6	ENSMUSG00000058407.13	Txndc9	chr1	protein_coding	thioredoxin domain containing 9
chr1	38081101	38083785	+	38080919	38083785	A5SS	0.33	50	50	ENSMUST00000027252.8	ENSMUSG00000026083.13	Eif5b	chr1	protein_coding	eukaryotic translation initiation factor 5B
chr1	38081982	38083785	+	38080919	38083785	A5SS	0.33	50	50	ENSMUST00000027252.8	ENSMUSG00000026083.13	Eif5b	chr1	protein_coding	eukaryotic translation initiation factor 5B
chr1	38081982	38083785	+	38081101	38083785	A5SS	0.33	50	50	ENSMUST00000193806.6	ENSMUSG00000026083.13	Eif5b	chr1	protein_coding	eukaryotic translation initiation factor 5B
chr1	38113524;38114104	38113980;38118371	-	38113524	38118371	cassetteExon	0.5	100	100	ENSMUST00000027251.12	ENSMUSG00000026082.12	Rev1	chr1	protein_coding	REV1, DNA directed polymerase
chr1	38118479;38120439	38120240;38122785	-	38118479	38122785	cassetteExon	0.5	100	100	ENSMUST00000027251.12	ENSMUSG00000026082.12	Rev1	chr1	protein_coding	REV1, DNA directed polymerase
chr1	38147548;38167396	38167333;38168543	-	38147548	38168543	cassetteExon	0.5	100	100	ENSMUST00000027251.12	ENSMUSG00000026082.12	Rev1	chr1	protein_coding	REV1, DNA directed polymerase
chr1	38147548	38160214	-	38147548	38168543	A5SS	0.33	50	50	ENSMUST00000027251.12	ENSMUSG00000026082.12	Rev1	chr1	protein_coding	REV1, DNA directed polymerase
chr1	38113524	38118371	-	38114104	38118371	A3SS	0.5	50	50	ENSMUST00000194650.6	ENSMUSG00000026082.12	Rev1	chr1	protein_coding	REV1, DNA directed polymerase
chr1	38118479	38120240	-	38118476	38120240	A3SS	0.5	50	50	ENSMUST00000193472.2	ENSMUSG00000026082.12	Rev1	chr1	protein_coding	REV1, DNA directed polymerase
chr1	38118479	38122785	-	38120439	38122785	A3SS&ES	0.5	50	50	ENSMUST00000193472.2	ENSMUSG00000026082.12	Rev1	chr1	protein_coding	REV1, DNA directed polymerase
chr1	38118479	38122785	-	38118479	38120240	5pMXE	0.5	50	50	ENSMUST00000192697.2	ENSMUSG00000026082.12	Rev1	chr1	protein_coding	REV1, DNA directed polymerase
chr1	38147548	38167333	-	38147548;38160290	38160214;38167333	ES	0.5	50	50	ENSMUST00000192594.6	ENSMUSG00000026082.12	Rev1	chr1	protein_coding	REV1, DNA directed polymerase
chr1	38147548	38168543	-	38147548	38167333	5pMXE	0.33	50	50	ENSMUST00000193697.6	ENSMUSG00000026082.12	Rev1	chr1	protein_coding	REV1, DNA directed polymerase
chr1	38576027	38703939	-	38576027	38666170	5pMXE	0.33	50	50	ENSMUST00000095027.9	ENSMUSG00000037138.19	Aff3	chr1	protein_coding	AF4/FMR2 family, member 3
chr1	38576027;38578082	38578008;38666170	-	38576027	38666170	cassetteExon	0.5	100	100	ENSMUST00000095027.9	ENSMUSG00000037138.19	Aff3	chr1	protein_coding	AF4/FMR2 family, member 3
chr1	38291759	38308791	-	38291762	38308791	A3SS	0.5	50	50	ENSMUST00000095027.9	ENSMUSG00000037138.19	Aff3	chr1	protein_coding	AF4/FMR2 family, member 3
chr1	38374954	38380802	-	38368989	38380802	A3SS	0.5	50	50	ENSMUST00000095027.9	ENSMUSG00000037138.19	Aff3	chr1	protein_coding	AF4/FMR2 family, member 3
chr1	38232710	38236403	-	38232710	38242892	A5SS	0.5	50	50	ENSMUST00000095027.9	ENSMUSG00000037138.19	Aff3	chr1	protein_coding	AF4/FMR2 family, member 3
chr1	38576027	38703939	-	38576027;38666325	38666170;38703939	ES	0.5	50	50	ENSMUST00000039827.14	ENSMUSG00000037138.19	Aff3	chr1	protein_coding	AF4/FMR2 family, member 3
chr1	38576027	38578008	-	38576027	38703939	A5SS	0.33	50	50	ENSMUST00000134963.2	ENSMUSG00000037138.19	Aff3	chr1	protein_coding	AF4/FMR2 family, member 3
chr1	38428009	38428391	+	38424242	38428391	A5SS	0.5	50	50	ENSMUST00000143261.8	ENSMUSG00000087131.8	Gm16152	chr1	lncRNA	predicted gene 16152
chr1	38923562	38936971	-	38923562;38935137	38935018;38936971	ES	0.5	50	50	ENSMUST00000027249.12	ENSMUSG00000026080.14	Chst10	chr1	protein_coding	carbohydrate sulfotransferase 10
chr1	38913121;38921699	38921570;38923431	-	38913121	38923431	cassetteExon	0.5	100	100	ENSMUST00000027249.12	ENSMUSG00000026080.14	Chst10	chr1	protein_coding	carbohydrate sulfotransferase 10
chr1	38923562;38933752	38933645;38935018	-	38923562	38935018	cassetteExon	0.5	100	100	ENSMUST00000027249.12	ENSMUSG00000026080.14	Chst10	chr1	protein_coding	carbohydrate sulfotransferase 10
chr1	38923562	38933645	-	38923562	38936971	A5SS	0.33	50	50	ENSMUST00000194361.6	ENSMUSG00000026080.14	Chst10	chr1	protein_coding	carbohydrate sulfotransferase 10
chr1	38923562	38936971	-	38935137	38936971	3pMXE	0.5	50	50	ENSMUST00000192175.2	ENSMUSG00000026080.14	Chst10	chr1	protein_coding	carbohydrate sulfotransferase 10
chr1	38923562	38935018	-	38933752	38935018	3pMXE	0.5	50	50	ENSMUST00000195731.2	ENSMUSG00000026080.14	Chst10	chr1	protein_coding	carbohydrate sulfotransferase 10
chr1	38980998	38983137	+	38980998;38983042	38983019;38983137	ES	0.5	50	50	ENSMUST00000088029.8	ENSMUSG00000067604.9	Nms	chr1	protein_coding	neuromedin S
chr1	39027118	39030327	+	39026930	39030327	A5SS	0.33	50	50	ENSMUST00000027247.11	ENSMUSG00000026078.11	Pdcl3	chr1	protein_coding	phosducin-like 3
chr1	39027150	39030327	+	39026930	39030327	A5SS	0.33	50	50	ENSMUST00000027247.11	ENSMUSG00000026078.11	Pdcl3	chr1	protein_coding	phosducin-like 3
chr1	39027150	39030327	+	39027118	39030327	A5SS	0.33	50	50	ENSMUST00000193489.2	ENSMUSG00000026078.11	Pdcl3	chr1	protein_coding	phosducin-like 3
chr1	39233823	39302400	+	39233090	39302400	A5SS	0.5	50	50	ENSMUST00000173050.8	ENSMUSG00000026077.16	Npas2	chr1	protein_coding	neuronal PAS domain protein 2
chr1	39380911	39384350	+	39377280	39384350	A5SS	0.5	50	50	ENSMUST00000056815.9	ENSMUSG00000026077.16	Npas2	chr1	protein_coding	neuronal PAS domain protein 2
chr1	39409220	39410090	+	39409220	39410035	A3SS	0.5	50	50	ENSMUST00000086535.12	ENSMUSG00000073702.12	Rpl31	chr1	protein_coding	ribosomal protein L31
chr1	39407087	39407230	+	39407015	39407230	A5SS	0.5	50	50	ENSMUST00000086535.12	ENSMUSG00000073702.12	Rpl31	chr1	protein_coding	ribosomal protein L31
chr1	39444600	39465149	-	39444600;39445951	39445833;39465149	ES	0.5	50	50	ENSMUST00000054462.11	ENSMUSG00000003134.11	Tbc1d8	chr1	protein_coding	TBC1 domain family, member 8
chr1	39594751	39599774	-	39594751;39597492	39597396;39599774	ES	0.5	50	50	ENSMUST00000062525.11	ENSMUSG00000048234.14	Rnf149	chr1	protein_coding	ring finger protein 149
chr1	39604413	39616236	-	39604413	39615908	A5SS	0.33	50	50	ENSMUST00000062525.11	ENSMUSG00000048234.14	Rnf149	chr1	protein_coding	ring finger protein 149
chr1	39604413	39616413	-	39604413	39615908	A5SS	0.33	50	50	ENSMUST00000062525.11	ENSMUSG00000048234.14	Rnf149	chr1	protein_coding	ring finger protein 149
chr1	39604413	39616236	-	39604413	39616413	A5SS	0.33	50	50	ENSMUST00000195136.2	ENSMUSG00000048234.14	Rnf149	chr1	protein_coding	ring finger protein 149
chr1	39594751	39599774	-	39594751	39597396	5pMXE	0.5	50	50	ENSMUST00000153381.2	ENSMUSG00000048234.14	Rnf149	chr1	protein_coding	ring finger protein 149
chr1	39729361	39730901	-	39729361	39735058	A5SS	0.5	50	50	ENSMUST00000151913.3	ENSMUSG00000057173.9	Rfx8	chr1	protein_coding	regulatory factor X 8
chr1	39884499	39886469	-	39884499	39884825	5pMXE	0.5	50	50	ENSMUST00000187091.7	ENSMUSG00000101634.7	1700066B17Rik	chr1	lncRNA	RIKEN cDNA 1700066B17 gene
chr1	39881716	39884388	-	39879898	39884388	A3SS	0.33	50	50	ENSMUST00000187091.7	ENSMUSG00000101634.7	1700066B17Rik	chr1	lncRNA	RIKEN cDNA 1700066B17 gene
chr1	39883263	39884388	-	39879898	39884388	A3SS	0.33	50	50	ENSMUST00000187091.7	ENSMUSG00000101634.7	1700066B17Rik	chr1	lncRNA	RIKEN cDNA 1700066B17 gene
chr1	39881716	39884388	-	39881716;39883263	39883178;39884388	ES	0.5	50	50	ENSMUST00000191299.7	ENSMUSG00000101634.7	1700066B17Rik	chr1	lncRNA	RIKEN cDNA 1700066B17 gene
chr1	39884499	39886469	-	39884499;39885006	39884825;39886469	ES	0.5	50	50	ENSMUST00000191299.7	ENSMUSG00000101634.7	1700066B17Rik	chr1	lncRNA	RIKEN cDNA 1700066B17 gene
chr1	40039909	40043967	+	40039909;40040751	40040590;40043967	ES	0.33	50	50	ENSMUST00000168431.7	ENSMUSG00000026074.16	Map4k4	chr1	protein_coding	mitogen-activated protein kinase kinase kinase kinase 4
chr1	40039909;40043147	40042917;40043967	+	40039909;40040751	40040590;40043967	MXE	0.5	100	100	ENSMUST00000168431.7	ENSMUSG00000026074.16	Map4k4	chr1	protein_coding	mitogen-activated protein kinase kinase kinase kinase 4
chr1	40039909;40043147	40042923;40043967	+	40039909;40040751	40040590;40043967	MXE	0.5	100	100	ENSMUST00000168431.7	ENSMUSG00000026074.16	Map4k4	chr1	protein_coding	mitogen-activated protein kinase kinase kinase kinase 4
chr1	40040751;40043147	40042917;40043967	+	40040751	40043967	cassetteExon	0.5	100	100	ENSMUST00000168431.7	ENSMUSG00000026074.16	Map4k4	chr1	protein_coding	mitogen-activated protein kinase kinase kinase kinase 4
chr1	40046690;40047499	40047491;40048848	+	40046690	40048848	cassetteExon	0.5	100	100	ENSMUST00000168431.7	ENSMUSG00000026074.16	Map4k4	chr1	protein_coding	mitogen-activated protein kinase kinase kinase kinase 4
chr1	40049837;40051001	40050810;40053266	+	40049837	40053266	cassetteExon	0.5	100	100	ENSMUST00000168431.7	ENSMUSG00000026074.16	Map4k4	chr1	protein_coding	mitogen-activated protein kinase kinase kinase kinase 4
chr1	40039134	40039784	+	40039134	40039691	A3SS	0.5	50	50	ENSMUST00000168431.7	ENSMUSG00000026074.16	Map4k4	chr1	protein_coding	mitogen-activated protein kinase kinase kinase kinase 4
chr1	40044073	40045831	+	40044073	40045834	A3SS	0.5	50	50	ENSMUST00000168431.7	ENSMUSG00000026074.16	Map4k4	chr1	protein_coding	mitogen-activated protein kinase kinase kinase kinase 4
chr1	40003364	40013087	+	40001394	40013087	A5SS	0.33	50	50	ENSMUST00000168431.7	ENSMUSG00000026074.16	Map4k4	chr1	protein_coding	mitogen-activated protein kinase kinase kinase kinase 4
chr1	40004061	40013087	+	40001394	40013087	A5SS	0.33	50	50	ENSMUST00000168431.7	ENSMUSG00000026074.16	Map4k4	chr1	protein_coding	mitogen-activated protein kinase kinase kinase kinase 4
chr1	40046699	40048848	+	40046690	40048848	A5SS	0.33	50	50	ENSMUST00000168431.7	ENSMUSG00000026074.16	Map4k4	chr1	protein_coding	mitogen-activated protein kinase kinase kinase kinase 4
chr1	40039909	40042917	+	40039909;40040751	40040590;40042917	ES	0.5	50	50	ENSMUST00000163854.9	ENSMUSG00000026074.16	Map4k4	chr1	protein_coding	mitogen-activated protein kinase kinase kinase kinase 4
chr1	40039909	40042923	+	40039909	40040590	A3SS&ES	0.25	50	50	ENSMUST00000163854.9	ENSMUSG00000026074.16	Map4k4	chr1	protein_coding	mitogen-activated protein kinase kinase kinase kinase 4
chr1	40047499	40048848	+	40046699	40048848	A5SS	0.33	50	50	ENSMUST00000163854.9	ENSMUSG00000026074.16	Map4k4	chr1	protein_coding	mitogen-activated protein kinase kinase kinase kinase 4
chr1	40039909;40043147	40042917;40043967	+	40039909	40043967	cassetteExon	0.5	100	100	ENSMUST00000193682.6	ENSMUSG00000026074.16	Map4k4	chr1	protein_coding	mitogen-activated protein kinase kinase kinase kinase 4
chr1	40039909;40043147	40042923;40043967	+	40039909	40043967	cassetteExon	0.5	100	100	ENSMUST00000193682.6	ENSMUSG00000026074.16	Map4k4	chr1	protein_coding	mitogen-activated protein kinase kinase kinase kinase 4
chr1	40039909	40042923	+	40039909	40042917	A3SS	0.25	50	50	ENSMUST00000192509.6	ENSMUSG00000026074.16	Map4k4	chr1	protein_coding	mitogen-activated protein kinase kinase kinase kinase 4
chr1	40004061	40013087	+	40003364	40013087	A5SS	0.33	50	50	ENSMUST00000193514.7	ENSMUSG00000026074.16	Map4k4	chr1	protein_coding	mitogen-activated protein kinase kinase kinase kinase 4
chr1	40141697	40151115	+	40141697;40144682	40144424;40151115	ES	0.5	50	50	ENSMUST00000191671.6	ENSMUSG00000026073.14	Il1r2	chr1	protein_coding	interleukin 1 receptor, type II
chr1	40123979	40141549	+	40113408	40141549	A5SS	0.33	50	50	ENSMUST00000191671.6	ENSMUSG00000026073.14	Il1r2	chr1	protein_coding	interleukin 1 receptor, type II
chr1	40125462	40141549	+	40113408	40141549	A5SS	0.33	50	50	ENSMUST00000191671.6	ENSMUSG00000026073.14	Il1r2	chr1	protein_coding	interleukin 1 receptor, type II
chr1	40125462	40141549	+	40123979	40141549	A5SS	0.33	50	50	ENSMUST00000027243.13	ENSMUSG00000026073.14	Il1r2	chr1	protein_coding	interleukin 1 receptor, type II
chr1	40306041	40321393	+	40264466	40321393	A5SS	0.5	50	50	ENSMUST00000027241.11	ENSMUSG00000026072.13	Il1r1	chr1	protein_coding	interleukin 1 receptor, type I
chr1	40306041	40306537	+	40306041	40321393	A3SS	0.5	50	50	ENSMUST00000114795.3	ENSMUSG00000026072.13	Il1r1	chr1	protein_coding	interleukin 1 receptor, type I
chr1	40363909	40365649	+	40363979	40365649	A5SS	0.33	50	50	ENSMUST00000095020.9	ENSMUSG00000070942.9	Il1rl2	chr1	protein_coding	interleukin 1 receptor-like 2
chr1	40364957	40365649	+	40363979	40365649	A5SS	0.33	50	50	ENSMUST00000095020.9	ENSMUSG00000070942.9	Il1rl2	chr1	protein_coding	interleukin 1 receptor-like 2
chr1	40364957	40365649	+	40363909	40365649	A5SS	0.33	50	50	ENSMUST00000194296.6	ENSMUSG00000070942.9	Il1rl2	chr1	protein_coding	interleukin 1 receptor-like 2
chr1	40475806	40479788	+	40468790	40479788	A5SS	0.33	50	50	ENSMUST00000174335.8	ENSMUSG00000026069.16	Il1rl1	chr1	protein_coding	interleukin 1 receptor-like 1
chr1	40479016	40479788	+	40468790	40479788	A5SS	0.33	50	50	ENSMUST00000174335.8	ENSMUSG00000026069.16	Il1rl1	chr1	protein_coding	interleukin 1 receptor-like 1
chr1	40479016	40479788	+	40475806	40479788	A5SS	0.33	50	50	ENSMUST00000173881.8	ENSMUSG00000026069.16	Il1rl1	chr1	protein_coding	interleukin 1 receptor-like 1
chr1	40526258	40530218	+	40526258;40528900	40528761;40530218	ES	0.5	50	50	ENSMUST00000167723.8	ENSMUSG00000026070.16	Il18r1	chr1	protein_coding	interleukin 18 receptor 1
chr1	40504970	40505321	+	40504941	40505321	A5SS	0.5	50	50	ENSMUST00000167723.8	ENSMUSG00000026070.16	Il18r1	chr1	protein_coding	interleukin 18 receptor 1
chr1	40505429	40510889	+	40505517	40510889	A5SS	0.5	50	50	ENSMUST00000167723.8	ENSMUSG00000026070.16	Il18r1	chr1	protein_coding	interleukin 18 receptor 1
chr1	40611493	40619616	-	40611493;40613811	40613686;40619616	ES	0.5	50	50	ENSMUST00000193927.2	ENSMUSG00000104441.2	Gm35801	chr1	lncRNA	predicted gene, 35801
chr1	40623482	40624286	+	40623482	40639930	A3SS	0.5	50	50	ENSMUST00000027233.9	ENSMUSG00000026065.9	Slc9a4	chr1	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 4
chr1	40639792	40639930	+	40623482	40639930	A5SS	0.5	50	50	ENSMUST00000027233.9	ENSMUSG00000026065.9	Slc9a4	chr1	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 4
chr1	40826777;40829560	40829431;40829645	-	40826777	40829645	cassetteExon	0.5	100	100	ENSMUST00000039672.6	ENSMUSG00000041945.13	Mfsd9	chr1	protein_coding	major facilitator superfamily domain containing 9
chr1	40820719	40823537	-	40820750	40823537	A3SS	0.5	50	50	ENSMUST00000039672.6	ENSMUSG00000041945.13	Mfsd9	chr1	protein_coding	major facilitator superfamily domain containing 9
chr1	41957886	41959069	+	41936691	41959069	A5SS	0.5	50	50	ENSMUST00000186391.2	ENSMUSG00000100832.2	Gm29260	chr1	lncRNA	predicted gene 29260
chr1	42706163;42733650	42733556;42733907	-	42706163	42733907	cassetteExon	0.5	100	100	ENSMUST00000181660.8	ENSMUSG00000060424.15	Pantr1	chr1	lncRNA	POU domain, class 3, transcription factor 3 adjacent noncoding transcript 1
chr1	42687616	42706001	-	42661758	42706001	A3SS	0.25	50	50	ENSMUST00000181660.8	ENSMUSG00000060424.15	Pantr1	chr1	lncRNA	POU domain, class 3, transcription factor 3 adjacent noncoding transcript 1
chr1	42702762	42706001	-	42661758	42706001	A3SS	0.25	50	50	ENSMUST00000181660.8	ENSMUSG00000060424.15	Pantr1	chr1	lncRNA	POU domain, class 3, transcription factor 3 adjacent noncoding transcript 1
chr1	42702820	42706001	-	42661758	42706001	A3SS	0.25	50	50	ENSMUST00000181660.8	ENSMUSG00000060424.15	Pantr1	chr1	lncRNA	POU domain, class 3, transcription factor 3 adjacent noncoding transcript 1
chr1	42706163	42706746	-	42706163	42733907	A5SS	0.25	50	50	ENSMUST00000181660.8	ENSMUSG00000060424.15	Pantr1	chr1	lncRNA	POU domain, class 3, transcription factor 3 adjacent noncoding transcript 1
chr1	42706163	42732101	-	42706163	42733907	A5SS	0.25	50	50	ENSMUST00000181660.8	ENSMUSG00000060424.15	Pantr1	chr1	lncRNA	POU domain, class 3, transcription factor 3 adjacent noncoding transcript 1
chr1	42706163	42733556	-	42706163	42732101	5pMXE	0.25	50	50	ENSMUST00000181725.8	ENSMUSG00000060424.15	Pantr1	chr1	lncRNA	POU domain, class 3, transcription factor 3 adjacent noncoding transcript 1
chr1	42687616;42702762	42702716;42706001	-	42687616	42706001	cassetteExon	0.5	100	100	ENSMUST00000181725.8	ENSMUSG00000060424.15	Pantr1	chr1	lncRNA	POU domain, class 3, transcription factor 3 adjacent noncoding transcript 1
chr1	42687616;42702820	42702716;42706001	-	42687616	42706001	cassetteExon	0.5	100	100	ENSMUST00000181725.8	ENSMUSG00000060424.15	Pantr1	chr1	lncRNA	POU domain, class 3, transcription factor 3 adjacent noncoding transcript 1
chr1	42687616	42690535	-	42687616	42706001	A5SS	0.25	50	50	ENSMUST00000181725.8	ENSMUSG00000060424.15	Pantr1	chr1	lncRNA	POU domain, class 3, transcription factor 3 adjacent noncoding transcript 1
chr1	42687616	42691722	-	42687616	42706001	A5SS	0.25	50	50	ENSMUST00000181725.8	ENSMUSG00000060424.15	Pantr1	chr1	lncRNA	POU domain, class 3, transcription factor 3 adjacent noncoding transcript 1
chr1	42706163	42706746	-	42706163	42732101	A5SS	0.25	50	50	ENSMUST00000181725.8	ENSMUSG00000060424.15	Pantr1	chr1	lncRNA	POU domain, class 3, transcription factor 3 adjacent noncoding transcript 1
chr1	42687616;42691749	42691722;42702716	-	42687616	42702716	cassetteExon	0.5	100	100	ENSMUST00000176154.3	ENSMUSG00000060424.15	Pantr1	chr1	lncRNA	POU domain, class 3, transcription factor 3 adjacent noncoding transcript 1
chr1	42702762	42706001	-	42702820	42706001	A3SS	0.33	50	50	ENSMUST00000176154.3	ENSMUSG00000060424.15	Pantr1	chr1	lncRNA	POU domain, class 3, transcription factor 3 adjacent noncoding transcript 1
chr1	42687616	42690535	-	42687616	42702716	A5SS	0.25	50	50	ENSMUST00000176154.3	ENSMUSG00000060424.15	Pantr1	chr1	lncRNA	POU domain, class 3, transcription factor 3 adjacent noncoding transcript 1
chr1	42687616	42691722	-	42687616	42690535	5pMXE	0.25	50	50	ENSMUST00000176977.8	ENSMUSG00000060424.15	Pantr1	chr1	lncRNA	POU domain, class 3, transcription factor 3 adjacent noncoding transcript 1
chr1	42706163	42733556	-	42706163	42706746	5pMXE	0.25	50	50	ENSMUST00000176052.8	ENSMUSG00000060424.15	Pantr1	chr1	lncRNA	POU domain, class 3, transcription factor 3 adjacent noncoding transcript 1
chr1	42706163	42733907	-	42733650	42733907	3pMXE	0.5	50	50	ENSMUST00000177136.3	ENSMUSG00000060424.15	Pantr1	chr1	lncRNA	POU domain, class 3, transcription factor 3 adjacent noncoding transcript 1
chr1	42734348	42782900	+	42734348	42779733	3pMXE	0.33	50	50	ENSMUST00000199521.5	ENSMUSG00000093436.7	Gm20646	chr1	lncRNA	predicted gene 20646
chr1	42734348	42734545	+	42734348	42779733	A3SS	0.33	50	50	ENSMUST00000199521.5	ENSMUSG00000093436.7	Gm20646	chr1	lncRNA	predicted gene 20646
chr1	42734348	42734545	+	42734348	42782900	A3SS	0.33	50	50	ENSMUST00000176807.3	ENSMUSG00000093436.7	Gm20646	chr1	lncRNA	predicted gene 20646
chr1	42935328	42937401	+	42935328	42937600	A3SS	0.5	50	50	ENSMUST00000057208.13	ENSMUSG00000060679.15	Mrps9	chr1	protein_coding	mitochondrial ribosomal protein S9
chr1	42937768	42938513	+	42937768	42938601	A3SS	0.5	50	50	ENSMUST00000057208.13	ENSMUSG00000060679.15	Mrps9	chr1	protein_coding	mitochondrial ribosomal protein S9
chr1	42938709	42940234	+	42938709	42942455	A3SS	0.5	50	50	ENSMUST00000057208.13	ENSMUSG00000060679.15	Mrps9	chr1	protein_coding	mitochondrial ribosomal protein S9
chr1	42992393	43068307	+	42992393	42992632	3pMXE	0.33	50	50	ENSMUST00000188621.2	ENSMUSG00000041907.10	Gpr45	chr1	protein_coding	G protein-coupled receptor 45
chr1	42992393	43071112	+	42992393	42992632	3pMXE	0.33	50	50	ENSMUST00000188621.2	ENSMUSG00000041907.10	Gpr45	chr1	protein_coding	G protein-coupled receptor 45
chr1	42992393	43068307	+	42992393	43071112	A3SS	0.33	50	50	ENSMUST00000179766.3	ENSMUSG00000041907.10	Gpr45	chr1	protein_coding	G protein-coupled receptor 45
chr1	43110815	43136012	-	43110815;43115112	43114411;43136012	ES	0.33	50	50	ENSMUST00000095014.8	ENSMUSG00000070939.10	Tgfbrap1	chr1	protein_coding	transforming growth factor, beta receptor associated protein 1
chr1	43115112;43134679	43134525;43136012	-	43115112	43136012	cassetteExon	0.5	100	100	ENSMUST00000095014.8	ENSMUSG00000070939.10	Tgfbrap1	chr1	protein_coding	transforming growth factor, beta receptor associated protein 1
chr1	43110815	43131541	-	43110815	43114411	A5SS&ES	0.33	50	50	ENSMUST00000095014.8	ENSMUSG00000070939.10	Tgfbrap1	chr1	protein_coding	transforming growth factor, beta receptor associated protein 1
chr1	43115112	43131541	-	43115112	43136012	A5SS	0.33	50	50	ENSMUST00000095014.8	ENSMUSG00000070939.10	Tgfbrap1	chr1	protein_coding	transforming growth factor, beta receptor associated protein 1
chr1	43110815	43131541	-	43110815;43115112	43114411;43131541	ES	0.5	50	50	ENSMUST00000186694.7	ENSMUSG00000070939.10	Tgfbrap1	chr1	protein_coding	transforming growth factor, beta receptor associated protein 1
chr1	43115112	43134525	-	43115112	43131541	5pMXE	0.33	50	50	ENSMUST00000186694.7	ENSMUSG00000070939.10	Tgfbrap1	chr1	protein_coding	transforming growth factor, beta receptor associated protein 1
chr1	43110815	43136012	-	43110815	43131541	5pMXE	0.33	50	50	ENSMUST00000188728.2	ENSMUSG00000070939.10	Tgfbrap1	chr1	protein_coding	transforming growth factor, beta receptor associated protein 1
chr1	43115112	43131541	-	43110815	43131541	A3SS	0.5	50	50	ENSMUST00000188728.2	ENSMUSG00000070939.10	Tgfbrap1	chr1	protein_coding	transforming growth factor, beta receptor associated protein 1
chr1	43115112	43136012	-	43110815	43136012	A3SS	0.33	50	50	ENSMUST00000190427.7	ENSMUSG00000070939.10	Tgfbrap1	chr1	protein_coding	transforming growth factor, beta receptor associated protein 1
chr1	43134679	43136012	-	43110815	43136012	A3SS	0.33	50	50	ENSMUST00000190427.7	ENSMUSG00000070939.10	Tgfbrap1	chr1	protein_coding	transforming growth factor, beta receptor associated protein 1
chr1	43110815	43114411	-	43110815	43136012	A5SS	0.33	50	50	ENSMUST00000190427.7	ENSMUSG00000070939.10	Tgfbrap1	chr1	protein_coding	transforming growth factor, beta receptor associated protein 1
chr1	43192414	43235811	-	43192414	43202862	5pMXE	0.5	50	50	ENSMUST00000008280.14	ENSMUSG00000008136.15	Fhl2	chr1	protein_coding	four and a half LIM domains 2
chr1	43181032	43235811	-	43181032;43192414	43192236;43235811	ES	0.5	50	50	ENSMUST00000185893.2	ENSMUSG00000008136.15	Fhl2	chr1	protein_coding	four and a half LIM domains 2
chr1	43485187	43548781	+	43483866	43548781	A5SS	0.5	50	50	ENSMUST00000187435.7	ENSMUSG00000066877.12	Nck2	chr1	protein_coding	non-catalytic region of tyrosine kinase adaptor protein 2
chr1	43571698	43572712	+	43548943	43572712	A5SS	0.5	50	50	ENSMUST00000187435.7	ENSMUSG00000066877.12	Nck2	chr1	protein_coding	non-catalytic region of tyrosine kinase adaptor protein 2
chr1	43485187	43548781	+	43485187	43500117	3pMXE	0.5	50	50	ENSMUST00000136648.8	ENSMUSG00000066877.12	Nck2	chr1	protein_coding	non-catalytic region of tyrosine kinase adaptor protein 2
chr1	43496587	43500117	+	43485187	43500117	A5SS	0.5	50	50	ENSMUST00000136648.8	ENSMUSG00000066877.12	Nck2	chr1	protein_coding	non-catalytic region of tyrosine kinase adaptor protein 2
chr1	43572953	43608308	+	43572953;43593742	43593021;43608308	ES	0.5	50	50	ENSMUST00000086421.9	ENSMUSG00000066877.12	Nck2	chr1	protein_coding	non-catalytic region of tyrosine kinase adaptor protein 2
chr1	43572953	43608308	+	43572953	43593021	3pMXE	0.5	50	50	ENSMUST00000202540.2	ENSMUSG00000066877.12	Nck2	chr1	protein_coding	non-catalytic region of tyrosine kinase adaptor protein 2
chr1	43593742	43608308	+	43572953	43608308	A5SS	0.5	50	50	ENSMUST00000114744.3	ENSMUSG00000066877.12	Nck2	chr1	protein_coding	non-catalytic region of tyrosine kinase adaptor protein 2
chr1	43819329	43836405	-	43819329;43829804	43829624;43836405	ES	0.33	50	50	ENSMUST00000126008.8	ENSMUSG00000057363.13	Uxs1	chr1	protein_coding	UDP-glucuronate decarboxylase 1
chr1	43836465;43841784	43841692;43844513	-	43836465	43844513	cassetteExon	0.5	100	100	ENSMUST00000126008.8	ENSMUSG00000057363.13	Uxs1	chr1	protein_coding	UDP-glucuronate decarboxylase 1
chr1	43846537;43856124	43856036;43866775	-	43846537	43866775	cassetteExon	0.5	100	100	ENSMUST00000126008.8	ENSMUSG00000057363.13	Uxs1	chr1	protein_coding	UDP-glucuronate decarboxylase 1
chr1	43829710	43836405	-	43829804	43836405	A3SS	0.33	50	50	ENSMUST00000126008.8	ENSMUSG00000057363.13	Uxs1	chr1	protein_coding	UDP-glucuronate decarboxylase 1
chr1	43844849	43846510	-	43844834	43846510	A3SS	0.5	50	50	ENSMUST00000126008.8	ENSMUSG00000057363.13	Uxs1	chr1	protein_coding	UDP-glucuronate decarboxylase 1
chr1	43846537	43865897	-	43846537	43866775	A5SS	0.25	50	50	ENSMUST00000126008.8	ENSMUSG00000057363.13	Uxs1	chr1	protein_coding	UDP-glucuronate decarboxylase 1
chr1	43846537	43866866	-	43846537	43866775	A5SS	0.25	50	50	ENSMUST00000126008.8	ENSMUSG00000057363.13	Uxs1	chr1	protein_coding	UDP-glucuronate decarboxylase 1
chr1	43819329	43836405	-	43819329;43829710	43829624;43836405	ES	0.33	50	50	ENSMUST00000076997.13	ENSMUSG00000057363.13	Uxs1	chr1	protein_coding	UDP-glucuronate decarboxylase 1
chr1	43846537	43866866	-	43846537	43865897	5pMXE	0.25	50	50	ENSMUST00000136179.8	ENSMUSG00000057363.13	Uxs1	chr1	protein_coding	UDP-glucuronate decarboxylase 1
chr1	43846537	43856036	-	43846537	43865897	A5SS	0.25	50	50	ENSMUST00000136179.8	ENSMUSG00000057363.13	Uxs1	chr1	protein_coding	UDP-glucuronate decarboxylase 1
chr1	43846537	43866775	-	43819329	43866775	A3SS	0.33	50	50	ENSMUST00000153317.6	ENSMUSG00000057363.13	Uxs1	chr1	protein_coding	UDP-glucuronate decarboxylase 1
chr1	43856124	43866775	-	43819329	43866775	A3SS	0.33	50	50	ENSMUST00000153317.6	ENSMUSG00000057363.13	Uxs1	chr1	protein_coding	UDP-glucuronate decarboxylase 1
chr1	43819329	43829624	-	43819329	43866775	A5SS	0.33	50	50	ENSMUST00000153317.6	ENSMUSG00000057363.13	Uxs1	chr1	protein_coding	UDP-glucuronate decarboxylase 1
chr1	43819329	43836405	-	43819329	43866775	A5SS	0.33	50	50	ENSMUST00000153317.6	ENSMUSG00000057363.13	Uxs1	chr1	protein_coding	UDP-glucuronate decarboxylase 1
chr1	43846537	43856036	-	43846537	43866866	A5SS	0.25	50	50	ENSMUST00000134860.8	ENSMUSG00000057363.13	Uxs1	chr1	protein_coding	UDP-glucuronate decarboxylase 1
chr1	43819329	43836405	-	43829804	43836405	3pMXE	0.33	50	50	ENSMUST00000128261.2	ENSMUSG00000057363.13	Uxs1	chr1	protein_coding	UDP-glucuronate decarboxylase 1
chr1	43973413	43979270	+	43973033	43979270	A5SS	0.5	50	50	ENSMUST00000185579.7	ENSMUSG00000041763.15	Tpp2	chr1	protein_coding	tripeptidyl peptidase II
chr1	44022752	44029671	+	44022752;44024614	44024576;44029671	ES	0.5	50	50	ENSMUST00000087933.10	ENSMUSG00000041763.15	Tpp2	chr1	protein_coding	tripeptidyl peptidase II
chr1	44010892	44011716	+	44010892	44011690	A3SS	0.5	50	50	ENSMUST00000087933.10	ENSMUSG00000041763.15	Tpp2	chr1	protein_coding	tripeptidyl peptidase II
chr1	44021027	44022398	+	44021027	44022232	A3SS	0.5	50	50	ENSMUST00000087933.10	ENSMUSG00000041763.15	Tpp2	chr1	protein_coding	tripeptidyl peptidase II
chr1	43995459	43995631	+	43993900	43995631	A5SS	0.5	50	50	ENSMUST00000087933.10	ENSMUSG00000041763.15	Tpp2	chr1	protein_coding	tripeptidyl peptidase II
chr1	44010563	44010724	+	44009676	44010724	A5SS	0.5	50	50	ENSMUST00000087933.10	ENSMUSG00000041763.15	Tpp2	chr1	protein_coding	tripeptidyl peptidase II
chr1	44049809	44052841	-	44049809	44052782	A5SS	0.5	50	50	ENSMUST00000061421.4	ENSMUSG00000047343.5	Mettl21c	chr1	protein_coding	methyltransferase like 21C
chr1	44127687	44139008	-	44127687;44130751	44130521;44139008	ES	0.33	50	50	ENSMUST00000027215.12	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44139161	44141060	-	44139161;44140682	44140627;44141060	ES	0.25	50	50	ENSMUST00000027215.12	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44127687;44130372	44130343;44130521	-	44127687	44130521	cassetteExon	0.5	100	100	ENSMUST00000027215.12	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44130751;44132477	44132424;44139008	-	44130751	44139008	cassetteExon	0.5	100	100	ENSMUST00000027215.12	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44139081	44141488	-	44141117	44141488	A3SS&ES	0.2	50	50	ENSMUST00000027215.12	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44139095	44141060	-	44140682	44141060	A3SS&ES	0.25	50	50	ENSMUST00000027215.12	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44139095	44141488	-	44141117	44141488	A3SS&ES	0.2	50	50	ENSMUST00000027215.12	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44130751;44141117	44141060;44141488	-	44130751;44139081	44139008;44141488	MXE	0.5	100	100	ENSMUST00000156392.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44139095	44141488	-	44139081	44141488	A3SS	0.2	50	50	ENSMUST00000156392.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44139161	44141488	-	44139081	44141488	A3SS	0.2	50	50	ENSMUST00000156392.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44130751	44141060	-	44130751;44139095	44139008;44141060	ES	0.25	50	50	ENSMUST00000128190.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44139161	44141060	-	44139095	44141060	A3SS	0.25	50	50	ENSMUST00000128190.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44127687	44141488	-	44127687	44130521	A5SS&ES	0.25	50	50	ENSMUST00000128190.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44139095	44141488	-	44139095	44141060	A5SS	0.5	50	50	ENSMUST00000128190.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44130751	44141060	-	44130751;44139161	44139008;44141060	ES	0.25	50	50	ENSMUST00000147571.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44139161	44146180	-	44139161	44141060	5pMXE	0.2	50	50	ENSMUST00000147571.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44139161	44146191	-	44139161	44141060	5pMXE	0.2	50	50	ENSMUST00000147571.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44139161	44141488	-	44139161	44141060	A5SS	0.2	50	50	ENSMUST00000147571.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44139095	44141488	-	44139095;44141117	44141060;44141488	ES	0.2	50	50	ENSMUST00000133677.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44139161	44141488	-	44141117	44141488	A3SS&ES	0.2	50	50	ENSMUST00000133677.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44139161	44146180	-	44139161	44141488	5pMXE	0.2	50	50	ENSMUST00000150911.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44139161	44146191	-	44139161	44141488	5pMXE	0.2	50	50	ENSMUST00000150911.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44130751;44141117	44141060;44141488	-	44130751;44139161	44139008;44141488	MXE	0.5	100	100	ENSMUST00000150911.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44139161;44141117	44140627;44141488	-	44139161	44141488	cassetteExon	0.5	100	100	ENSMUST00000150911.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44139161;44141117	44141060;44141488	-	44139161	44141488	cassetteExon	0.5	100	100	ENSMUST00000150911.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44139095	44141488	-	44139161	44141488	A3SS	0.2	50	50	ENSMUST00000150911.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44139161	44141060	-	44139161	44140627	5pMXE	0.2	50	50	ENSMUST00000152239.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44139161	44141488	-	44139161	44140627	5pMXE	0.2	50	50	ENSMUST00000152239.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44139161	44146180	-	44139161	44140627	5pMXE	0.2	50	50	ENSMUST00000152239.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44139161	44146191	-	44139161	44140627	5pMXE	0.2	50	50	ENSMUST00000152239.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44127687;44139081	44139008;44141488	-	44127687	44141488	cassetteExon	0.5	100	100	ENSMUST00000129702.2	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44127687;44139095	44139008;44141488	-	44127687	44141488	cassetteExon	0.5	100	100	ENSMUST00000129702.2	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44127687;44139161	44139008;44141488	-	44127687	44141488	cassetteExon	0.5	100	100	ENSMUST00000129702.2	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44141117	44141488	-	44127687	44141488	A3SS	0.2	50	50	ENSMUST00000129702.2	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44127687	44130343	-	44127687	44141488	A5SS	0.25	50	50	ENSMUST00000129702.2	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44127687;44130751	44130343;44139008	-	44127687	44139008	cassetteExon	0.5	100	100	ENSMUST00000147661.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44127687;44130751	44130343;44141060	-	44127687;44139161	44139008;44141060	MXE	0.5	100	100	ENSMUST00000147661.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44127687;44130751	44130521;44141060	-	44127687;44139161	44139008;44141060	MXE	0.5	100	100	ENSMUST00000147661.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44132477	44139008	-	44127687	44139008	A3SS	0.33	50	50	ENSMUST00000147661.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44127687;44139095	44139008;44141060	-	44127687;44130751	44130521;44141060	MXE	0.5	100	100	ENSMUST00000127923.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44140682	44141060	-	44130751	44141060	A3SS	0.25	50	50	ENSMUST00000127923.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44130751	44132424	-	44130751	44141060	A5SS	0.33	50	50	ENSMUST00000127923.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44130751;44141117	44141060;44141488	-	44130751;44139161	44132424;44141488	MXE	0.5	100	100	ENSMUST00000143327.2	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44130751;44141117	44141060;44141488	-	44130751;44139095	44139008;44141488	MXE	0.5	100	100	ENSMUST00000149502.8	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44130751	44141060	-	44130751	44139008	5pMXE	0.33	50	50	ENSMUST00000125540.2	ENSMUSG00000026049.12	Tex30	chr1	protein_coding	testis expressed 30
chr1	44139161	44146180	-	44139161	44146191	A5SS	0.2	50	50	ENSMUST00000148542.8	ENSMUSG00000101104.7	Gm29247	chr1	lncRNA	predicted gene 29247
chr1	44127687	44139008	-	44130751	44139008	3pMXE	0.33	50	50	ENSMUST00000134195.3	ENSMUSG00000101104.7	Gm29247	chr1	lncRNA	predicted gene 29247
chr1	44149243	44151805	-	44149243	44149895	5pMXE	0.5	50	50	ENSMUST00000134195.3	ENSMUSG00000101104.7	Gm29247	chr1	lncRNA	predicted gene 29247
chr1	44149243	44151805	-	44149243;44150104	44149895;44151805	ES	0.5	50	50	ENSMUST00000065767.9	ENSMUSG00000026047.14	Poglut2	chr1	protein_coding	protein O-glucosyltransferase 2
chr1	44154059;44155472	44155315;44156198	-	44154059	44156198	cassetteExon	0.5	100	100	ENSMUST00000065767.9	ENSMUSG00000026047.14	Poglut2	chr1	protein_coding	protein O-glucosyltransferase 2
chr1	44159434	44165503	+	44159434	44165426	A3SS	0.5	50	50	ENSMUST00000155917.8	ENSMUSG00000041684.12	Bivm	chr1	protein_coding	basic, immunoglobulin-like variable motif containing
chr1	44158335	44159334	+	44158355	44159334	A5SS	0.25	50	50	ENSMUST00000155917.8	ENSMUSG00000041684.12	Bivm	chr1	protein_coding	basic, immunoglobulin-like variable motif containing
chr1	44158530	44159334	+	44158355	44159334	A5SS	0.25	50	50	ENSMUST00000155917.8	ENSMUSG00000041684.12	Bivm	chr1	protein_coding	basic, immunoglobulin-like variable motif containing
chr1	44158889	44159334	+	44158355	44159334	A5SS	0.25	50	50	ENSMUST00000155917.8	ENSMUSG00000041684.12	Bivm	chr1	protein_coding	basic, immunoglobulin-like variable motif containing
chr1	44158530	44159334	+	44158335	44159334	A5SS	0.25	50	50	ENSMUST00000138521.8	ENSMUSG00000041684.12	Bivm	chr1	protein_coding	basic, immunoglobulin-like variable motif containing
chr1	44158889	44159334	+	44158335	44159334	A5SS	0.25	50	50	ENSMUST00000138521.8	ENSMUSG00000041684.12	Bivm	chr1	protein_coding	basic, immunoglobulin-like variable motif containing
chr1	44158889	44159334	+	44158530	44159334	A5SS	0.25	50	50	ENSMUST00000035991.8	ENSMUSG00000041684.12	Bivm	chr1	protein_coding	basic, immunoglobulin-like variable motif containing
chr1	44187125	44196097	+	44187310	44196097	A5SS	0.33	50	50	ENSMUST00000027214.4	ENSMUSG00000026048.17	Ercc5	chr1	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 5
chr1	44187297	44196097	+	44187310	44196097	A5SS	0.33	50	50	ENSMUST00000027214.4	ENSMUSG00000026048.17	Ercc5	chr1	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 5
chr1	44197495	44197965	+	44197419	44197965	A5SS	0.5	50	50	ENSMUST00000027214.4	ENSMUSG00000026048.17	Ercc5	chr1	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 5
chr1	44200269	44200970	+	44200197	44200970	A5SS	0.5	50	50	ENSMUST00000027214.4	ENSMUSG00000026048.17	Ercc5	chr1	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 5
chr1	44187297	44196097	+	44187125	44196097	A5SS	0.33	50	50	ENSMUST00000139510.8	ENSMUSG00000026048.17	Ercc5	chr1	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 5
chr1	44728375	44783634	+	44728375;44747838	44747777;44783634	ES	0.5	50	50	ENSMUST00000074525.10	ENSMUSG00000056870.10	Gulp1	chr1	protein_coding	GULP, engulfment adaptor PTB domain containing 1
chr1	44812547;44812823	44812800;44813213	+	44812547	44813213	cassetteExon	0.5	100	100	ENSMUST00000074525.10	ENSMUSG00000056870.10	Gulp1	chr1	protein_coding	GULP, engulfment adaptor PTB domain containing 1
chr1	44827702;44829866	44829856;44834110	+	44827702	44834110	cassetteExon	0.5	100	100	ENSMUST00000074525.10	ENSMUSG00000056870.10	Gulp1	chr1	protein_coding	GULP, engulfment adaptor PTB domain containing 1
chr1	44592467	44728304	+	44591032	44728304	A5SS	0.5	50	50	ENSMUST00000074525.10	ENSMUSG00000056870.10	Gulp1	chr1	protein_coding	GULP, engulfment adaptor PTB domain containing 1
chr1	44783705	44793503	+	44783705	44820128	A3SS	0.5	50	50	ENSMUST00000161793.2	ENSMUSG00000056870.10	Gulp1	chr1	protein_coding	GULP, engulfment adaptor PTB domain containing 1
chr1	44813305	44820128	+	44783705	44820128	A5SS	0.5	50	50	ENSMUST00000161793.2	ENSMUSG00000056870.10	Gulp1	chr1	protein_coding	GULP, engulfment adaptor PTB domain containing 1
chr1	44728375	44783634	+	44728375	44747777	3pMXE	0.5	50	50	ENSMUST00000161066.8	ENSMUSG00000056870.10	Gulp1	chr1	protein_coding	GULP, engulfment adaptor PTB domain containing 1
chr1	45350992	45354740	+	45350992	45360657	A3SS	0.5	50	50	ENSMUST00000129611.2	ENSMUSG00000026043.19	Col3a1	chr1	protein_coding	collagen, type III, alpha 1
chr1	45376499	45377118	+	45376499;45376693	45376586;45377118	ES	0.5	50	50	ENSMUST00000087883.13	ENSMUSG00000026043.19	Col3a1	chr1	protein_coding	collagen, type III, alpha 1
chr1	45843161	45845833	+	45843161;45844607	45844537;45845833	ES	0.5	50	50	ENSMUST00000027139.15	ENSMUSG00000025995.17	Wdr75	chr1	protein_coding	WD repeat domain 75
chr1	45841289	45843007	+	45841289	45843037	A3SS	0.5	50	50	ENSMUST00000027139.15	ENSMUSG00000025995.17	Wdr75	chr1	protein_coding	WD repeat domain 75
chr1	45862134	45862494	+	45862134	45862468	A3SS	0.5	50	50	ENSMUST00000027139.15	ENSMUSG00000025995.17	Wdr75	chr1	protein_coding	WD repeat domain 75
chr1	45845952	45846831	+	45845952	45852205	A3SS	0.5	50	50	ENSMUST00000143737.8	ENSMUSG00000025995.17	Wdr75	chr1	protein_coding	WD repeat domain 75
chr1	45851359	45852205	+	45845952	45852205	A5SS	0.5	50	50	ENSMUST00000143737.8	ENSMUSG00000025995.17	Wdr75	chr1	protein_coding	WD repeat domain 75
chr1	45843161	45845833	+	45843161	45844537	3pMXE	0.5	50	50	ENSMUST00000146602.2	ENSMUSG00000025995.17	Wdr75	chr1	protein_coding	WD repeat domain 75
chr1	45958330	45960316	-	45958160	45960316	A3SS	0.5	50	50	ENSMUST00000027137.11	ENSMUSG00000025993.11	Slc40a1	chr1	protein_coding	solute carrier family 40 (iron-regulated transporter), member 1
chr1	45960475	45962440	-	45960475	45963877	A5SS	0.5	50	50	ENSMUST00000027137.11	ENSMUSG00000025993.11	Slc40a1	chr1	protein_coding	solute carrier family 40 (iron-regulated transporter), member 1
chr1	45964487	45965584	-	45964525	45965584	A3SS	0.33	50	50	ENSMUST00000186804.2	ENSMUSG00000025993.11	Slc40a1	chr1	protein_coding	solute carrier family 40 (iron-regulated transporter), member 1
chr1	45964568	45965584	-	45964525	45965584	A3SS	0.33	50	50	ENSMUST00000186804.2	ENSMUSG00000025993.11	Slc40a1	chr1	protein_coding	solute carrier family 40 (iron-regulated transporter), member 1
chr1	45964568	45965584	-	45964487	45965584	A3SS	0.33	50	50	ENSMUST00000187406.7	ENSMUSG00000025993.11	Slc40a1	chr1	protein_coding	solute carrier family 40 (iron-regulated transporter), member 1
chr1	46065778	46067958	-	46065778;46067884	46067076;46067958	ES	0.33	50	50	ENSMUST00000051224.8	ENSMUSG00000044457.9	Stk-ps2	chr1	transcribed_processed_pseudogene	serine/threonine kinase 2
chr1	46064253;46065778	46065659;46067958	-	46064253	46067958	cassetteExon	0.5	100	100	ENSMUST00000167676.2	ENSMUSG00000044457.9	Stk-ps2	chr1	transcribed_processed_pseudogene	serine/threonine kinase 2
chr1	46067884	46067958	-	46064253	46067958	A3SS	0.33	50	50	ENSMUST00000167676.2	ENSMUSG00000044457.9	Stk-ps2	chr1	transcribed_processed_pseudogene	serine/threonine kinase 2
chr1	46067884	46067958	-	46065778	46067958	A3SS	0.33	50	50	ENSMUST00000171707.8	ENSMUSG00000044457.9	Stk-ps2	chr1	transcribed_processed_pseudogene	serine/threonine kinase 2
chr1	46065778	46067076	-	46065778	46067958	A5SS	0.5	50	50	ENSMUST00000171707.8	ENSMUSG00000044457.9	Stk-ps2	chr1	transcribed_processed_pseudogene	serine/threonine kinase 2
chr1	46183890	46214447	+	46181324	46214447	A5SS	0.5	50	50	ENSMUST00000069293.10	ENSMUSG00000041144.13	Dnah7b	chr1	protein_coding	dynein, axonemal, heavy chain 7B
chr1	46360944	46361410	+	46342798	46361410	A5SS	0.5	50	50	ENSMUST00000069293.10	ENSMUSG00000041144.13	Dnah7b	chr1	protein_coding	dynein, axonemal, heavy chain 7B
chr1	46395929	46397289	+	46395817	46397289	A5SS	0.5	50	50	ENSMUST00000069293.10	ENSMUSG00000041144.13	Dnah7b	chr1	protein_coding	dynein, axonemal, heavy chain 7B
chr1	46693343	46696237	+	46693343;46694792	46694637;46696237	ES	0.5	50	50	ENSMUST00000189749.7	ENSMUSG00000101337.7	Dnah7c	chr1	protein_coding	dynein, axonemal, heavy chain 7C
chr1	46678526	46678687	+	46677907	46678687	A5SS	0.5	50	50	ENSMUST00000189749.7	ENSMUSG00000101337.7	Dnah7c	chr1	protein_coding	dynein, axonemal, heavy chain 7C
chr1	46679431	46686154	+	46678863	46686154	A5SS	0.5	50	50	ENSMUST00000189749.7	ENSMUSG00000101337.7	Dnah7c	chr1	protein_coding	dynein, axonemal, heavy chain 7C
chr1	46875311	46927148	-	46875311	46892631	5pMXE	0.33	50	50	ENSMUST00000027131.6	ENSMUSG00000025986.7	Slc39a10	chr1	protein_coding	solute carrier family 39 (zinc transporter), member 10
chr1	46875311	46931960	-	46875311	46892631	5pMXE	0.33	50	50	ENSMUST00000027131.6	ENSMUSG00000025986.7	Slc39a10	chr1	protein_coding	solute carrier family 39 (zinc transporter), member 10
chr1	46875311	46927148	-	46875311	46931960	A5SS	0.33	50	50	ENSMUST00000186852.2	ENSMUSG00000025986.7	Slc39a10	chr1	protein_coding	solute carrier family 39 (zinc transporter), member 10
chr1	50950047	50951947	+	50939941	50951947	A5SS	0.5	50	50	ENSMUST00000186103.7	ENSMUSG00000026109.15	Tmeff2	chr1	protein_coding	transmembrane protein with EGF-like and two follistatin-like domains 2
chr1	50953487	50964426	+	50953487	50954494	3pMXE	0.5	50	50	ENSMUST00000139157.8	ENSMUSG00000026109.15	Tmeff2	chr1	protein_coding	transmembrane protein with EGF-like and two follistatin-like domains 2
chr1	50982382	51110627	+	50982382	51018459	3pMXE	0.5	50	50	ENSMUST00000114565.8	ENSMUSG00000026109.15	Tmeff2	chr1	protein_coding	transmembrane protein with EGF-like and two follistatin-like domains 2
chr1	51516775	51516984	-	51516775	51516881	A5SS	0.2	50	50	ENSMUST00000189542.7	ENSMUSG00000026107.12	Nabp1	chr1	protein_coding	nucleic acid binding protein 1
chr1	51516775	51517460	-	51516775	51516881	A5SS	0.2	50	50	ENSMUST00000189542.7	ENSMUSG00000026107.12	Nabp1	chr1	protein_coding	nucleic acid binding protein 1
chr1	51516775	51517527	-	51516775	51516881	A5SS	0.2	50	50	ENSMUST00000189542.7	ENSMUSG00000026107.12	Nabp1	chr1	protein_coding	nucleic acid binding protein 1
chr1	51516775	51517531	-	51516775	51516881	A5SS	0.2	50	50	ENSMUST00000189542.7	ENSMUSG00000026107.12	Nabp1	chr1	protein_coding	nucleic acid binding protein 1
chr1	51516775	51517460	-	51516775	51516984	A5SS	0.2	50	50	ENSMUST00000190103.7	ENSMUSG00000026107.12	Nabp1	chr1	protein_coding	nucleic acid binding protein 1
chr1	51516775	51517527	-	51516775	51516984	A5SS	0.2	50	50	ENSMUST00000190103.7	ENSMUSG00000026107.12	Nabp1	chr1	protein_coding	nucleic acid binding protein 1
chr1	51516775	51517531	-	51516775	51516984	A5SS	0.2	50	50	ENSMUST00000190103.7	ENSMUSG00000026107.12	Nabp1	chr1	protein_coding	nucleic acid binding protein 1
chr1	51516775	51517460	-	51516775	51517531	A5SS	0.2	50	50	ENSMUST00000188204.7	ENSMUSG00000026107.12	Nabp1	chr1	protein_coding	nucleic acid binding protein 1
chr1	51516775	51517527	-	51516775	51517531	A5SS	0.2	50	50	ENSMUST00000188204.7	ENSMUSG00000026107.12	Nabp1	chr1	protein_coding	nucleic acid binding protein 1
chr1	51516775	51517460	-	51516775	51517527	A5SS	0.2	50	50	ENSMUST00000188051.7	ENSMUSG00000026107.12	Nabp1	chr1	protein_coding	nucleic acid binding protein 1
chr1	51549203	51621519	-	51549203	51551399	5pMXE	0.5	50	50	ENSMUST00000190169.2	ENSMUSG00000099413.2	Gm17767	chr1	lncRNA	predicted gene, 17767
chr1	51736736	51785984	-	51736736	51737013	5pMXE	0.5	50	50	ENSMUST00000189576.2	ENSMUSG00000101741.2	Gm28055	chr1	lncRNA	predicted gene 28055
chr1	51803123	51808163	-	51803123;51806067	51805981;51808163	ES	0.33	50	50	ENSMUST00000046390.14	ENSMUSG00000018417.15	Myo1b	chr1	protein_coding	myosin IB
chr1	51806067;51807895	51807809;51808163	-	51806067	51808163	cassetteExon	0.5	100	100	ENSMUST00000046390.14	ENSMUSG00000018417.15	Myo1b	chr1	protein_coding	myosin IB
chr1	51922385;51950873	51950411;51954920	-	51922385	51954920	cassetteExon	0.5	100	100	ENSMUST00000046390.14	ENSMUSG00000018417.15	Myo1b	chr1	protein_coding	myosin IB
chr1	51833557	51834177	-	51833557	51836158	A5SS	0.5	50	50	ENSMUST00000046390.14	ENSMUSG00000018417.15	Myo1b	chr1	protein_coding	myosin IB
chr1	51859346	51859662	-	51859346	51863256	A5SS	0.5	50	50	ENSMUST00000046390.14	ENSMUSG00000018417.15	Myo1b	chr1	protein_coding	myosin IB
chr1	51873702	51889474	-	51873702	51902478	A5SS	0.5	50	50	ENSMUST00000046390.14	ENSMUSG00000018417.15	Myo1b	chr1	protein_coding	myosin IB
chr1	51922385	51935124	-	51922385	51954920	A5SS	0.25	50	50	ENSMUST00000046390.14	ENSMUSG00000018417.15	Myo1b	chr1	protein_coding	myosin IB
chr1	51922385	51946290	-	51922385	51954920	A5SS	0.25	50	50	ENSMUST00000046390.14	ENSMUSG00000018417.15	Myo1b	chr1	protein_coding	myosin IB
chr1	51807895	51808163	-	51803123	51808163	A3SS	0.33	50	50	ENSMUST00000114537.9	ENSMUSG00000018417.15	Myo1b	chr1	protein_coding	myosin IB
chr1	51922385	51950411	-	51922385	51946290	5pMXE	0.25	50	50	ENSMUST00000114541.8	ENSMUSG00000018417.15	Myo1b	chr1	protein_coding	myosin IB
chr1	51922385	51935124	-	51922385	51946290	A5SS	0.25	50	50	ENSMUST00000114541.8	ENSMUSG00000018417.15	Myo1b	chr1	protein_coding	myosin IB
chr1	51803123	51808163	-	51803123	51805981	5pMXE	0.5	50	50	ENSMUST00000140930.2	ENSMUSG00000018417.15	Myo1b	chr1	protein_coding	myosin IB
chr1	51803123	51808163	-	51806067	51808163	3pMXE	0.33	50	50	ENSMUST00000136273.2	ENSMUSG00000018417.15	Myo1b	chr1	protein_coding	myosin IB
chr1	51922385	51950411	-	51922385	51935124	5pMXE	0.25	50	50	ENSMUST00000144694.2	ENSMUSG00000018417.15	Myo1b	chr1	protein_coding	myosin IB
chr1	52117811	52121677	+	52117811;52118992	52118900;52121677	ES	0.5	50	50	ENSMUST00000168302.8	ENSMUSG00000062939.12	Stat4	chr1	protein_coding	signal transducer and activator of transcription 4
chr1	52121736	52122137	+	52121736;52122038	52122021;52122137	ES	0.5	50	50	ENSMUST00000168302.8	ENSMUSG00000062939.12	Stat4	chr1	protein_coding	signal transducer and activator of transcription 4
chr1	52122230	52135944	+	52122230;52123282	52123238;52135944	ES	0.5	50	50	ENSMUST00000168302.8	ENSMUSG00000062939.12	Stat4	chr1	protein_coding	signal transducer and activator of transcription 4
chr1	52047887	52050942	+	52035508	52050942	A5SS	0.5	50	50	ENSMUST00000168302.8	ENSMUSG00000062939.12	Stat4	chr1	protein_coding	signal transducer and activator of transcription 4
chr1	52047887	52052949	+	52051070	52052949	A5SS&ES	0.5	50	50	ENSMUST00000168302.8	ENSMUSG00000062939.12	Stat4	chr1	protein_coding	signal transducer and activator of transcription 4
chr1	52047887	52052949	+	52047887;52051070	52050942;52052949	ES	0.5	50	50	ENSMUST00000027277.7	ENSMUSG00000062939.12	Stat4	chr1	protein_coding	signal transducer and activator of transcription 4
chr1	52171792	52176038	+	52171792;52174840	52174762;52176038	ES	0.5	50	50	ENSMUST00000185516.2	ENSMUSG00000101628.2	Gm28177	chr1	lncRNA	predicted gene 28177
chr1	52178511;52179828	52179736;52182060	+	52178511	52182060	cassetteExon	0.5	100	100	ENSMUST00000185516.2	ENSMUSG00000101628.2	Gm28177	chr1	lncRNA	predicted gene 28177
chr1	52184350;52186536	52186453;52187060	+	52184350	52187060	cassetteExon	0.5	100	100	ENSMUST00000185516.2	ENSMUSG00000101628.2	Gm28177	chr1	lncRNA	predicted gene 28177
chr1	52194220;52194790	52194671;52195142	+	52194220	52195142	cassetteExon	0.5	100	100	ENSMUST00000185516.2	ENSMUSG00000101628.2	Gm28177	chr1	lncRNA	predicted gene 28177
chr1	52142198	52144365	+	52142198	52153041	A3SS	0.5	50	50	ENSMUST00000185516.2	ENSMUSG00000101628.2	Gm28177	chr1	lncRNA	predicted gene 28177
chr1	52183274	52183363	+	52183274	52183324	A3SS	0.5	50	50	ENSMUST00000185516.2	ENSMUSG00000101628.2	Gm28177	chr1	lncRNA	predicted gene 28177
chr1	52158763	52159071	+	52158277	52159071	A5SS	0.2	50	50	ENSMUST00000185516.2	ENSMUSG00000101628.2	Gm28177	chr1	lncRNA	predicted gene 28177
chr1	52158767	52159071	+	52158277	52159071	A5SS	0.2	50	50	ENSMUST00000185516.2	ENSMUSG00000101628.2	Gm28177	chr1	lncRNA	predicted gene 28177
chr1	52158782	52159071	+	52158277	52159071	A5SS	0.2	50	50	ENSMUST00000185516.2	ENSMUSG00000101628.2	Gm28177	chr1	lncRNA	predicted gene 28177
chr1	52158952	52159071	+	52158277	52159071	A5SS	0.2	50	50	ENSMUST00000185516.2	ENSMUSG00000101628.2	Gm28177	chr1	lncRNA	predicted gene 28177
chr1	52159231	52161750	+	52159194	52161750	A5SS	0.33	50	50	ENSMUST00000185516.2	ENSMUSG00000101628.2	Gm28177	chr1	lncRNA	predicted gene 28177
chr1	52159269	52161750	+	52159194	52161750	A5SS	0.33	50	50	ENSMUST00000185516.2	ENSMUSG00000101628.2	Gm28177	chr1	lncRNA	predicted gene 28177
chr1	52189480	52189778	+	52188197	52189778	A5SS	0.5	50	50	ENSMUST00000185516.2	ENSMUSG00000101628.2	Gm28177	chr1	lncRNA	predicted gene 28177
chr1	52186536	52187042	+	52186536	52187060	A3SS	0.5	50	50	ENSMUST00000186574.7	ENSMUSG00000026104.15	Stat1	chr1	protein_coding	signal transducer and activator of transcription 1
chr1	52158763	52159071	+	52158782	52159071	A5SS	0.2	50	50	ENSMUST00000186574.7	ENSMUSG00000026104.15	Stat1	chr1	protein_coding	signal transducer and activator of transcription 1
chr1	52158767	52159071	+	52158782	52159071	A5SS	0.2	50	50	ENSMUST00000186574.7	ENSMUSG00000026104.15	Stat1	chr1	protein_coding	signal transducer and activator of transcription 1
chr1	52158952	52159071	+	52158782	52159071	A5SS	0.2	50	50	ENSMUST00000186574.7	ENSMUSG00000026104.15	Stat1	chr1	protein_coding	signal transducer and activator of transcription 1
chr1	52159269	52161750	+	52159231	52161750	A5SS	0.33	50	50	ENSMUST00000186574.7	ENSMUSG00000026104.15	Stat1	chr1	protein_coding	signal transducer and activator of transcription 1
chr1	52158767	52159071	+	52158763	52159071	A5SS	0.2	50	50	ENSMUST00000191435.7	ENSMUSG00000026104.15	Stat1	chr1	protein_coding	signal transducer and activator of transcription 1
chr1	52158952	52159071	+	52158763	52159071	A5SS	0.2	50	50	ENSMUST00000191435.7	ENSMUSG00000026104.15	Stat1	chr1	protein_coding	signal transducer and activator of transcription 1
chr1	52158952	52159071	+	52158767	52159071	A5SS	0.2	50	50	ENSMUST00000186857.7	ENSMUSG00000026104.15	Stat1	chr1	protein_coding	signal transducer and activator of transcription 1
chr1	52184350	52187060	+	52184350	52186453	A3SS&ES	0.5	50	50	ENSMUST00000186057.7	ENSMUSG00000026104.15	Stat1	chr1	protein_coding	signal transducer and activator of transcription 1
chr1	52254853	52259102	-	52254853;52258768	52258647;52259102	ES	0.5	50	50	ENSMUST00000114513.9	ENSMUSG00000026103.15	Gls	chr1	protein_coding	glutaminase
chr1	52226953	52227838	-	52208117	52227838	A3SS	0.33	50	50	ENSMUST00000114513.9	ENSMUSG00000026103.15	Gls	chr1	protein_coding	glutaminase
chr1	52227012	52227838	-	52208117	52227838	A3SS	0.33	50	50	ENSMUST00000114513.9	ENSMUSG00000026103.15	Gls	chr1	protein_coding	glutaminase
chr1	52237850	52238870	-	52235968	52238870	A3SS	0.5	50	50	ENSMUST00000114513.9	ENSMUSG00000026103.15	Gls	chr1	protein_coding	glutaminase
chr1	52243675	52246460	-	52239046	52246460	A3SS	0.5	50	50	ENSMUST00000114513.9	ENSMUSG00000026103.15	Gls	chr1	protein_coding	glutaminase
chr1	52228713	52230038	-	52228713	52230270	A5SS	0.5	50	50	ENSMUST00000114513.9	ENSMUSG00000026103.15	Gls	chr1	protein_coding	glutaminase
chr1	52239046	52239777	-	52239046	52246460	A5SS	0.5	50	50	ENSMUST00000114513.9	ENSMUSG00000026103.15	Gls	chr1	protein_coding	glutaminase
chr1	52259198	52271255	-	52259198	52271751	A5SS	0.5	50	50	ENSMUST00000114513.9	ENSMUSG00000026103.15	Gls	chr1	protein_coding	glutaminase
chr1	52227012	52227838	-	52226953	52227838	A3SS	0.33	50	50	ENSMUST00000114510.8	ENSMUSG00000026103.15	Gls	chr1	protein_coding	glutaminase
chr1	52226953	52227844	-	52226953	52227838	A5SS	0.5	50	50	ENSMUST00000114510.8	ENSMUSG00000026103.15	Gls	chr1	protein_coding	glutaminase
chr1	52529914	52539369	-	52529914;52539156	52539009;52539369	ES	0.33	50	50	ENSMUST00000186764.7	ENSMUSG00000002881.15	Nab1	chr1	protein_coding	Ngfi-A binding protein 1
chr1	52504106	52506049	-	52504103	52506049	A3SS	0.5	50	50	ENSMUST00000186764.7	ENSMUSG00000002881.15	Nab1	chr1	protein_coding	Ngfi-A binding protein 1
chr1	52504106	52518397	-	52506138	52518397	A3SS&ES	0.5	50	50	ENSMUST00000186764.7	ENSMUSG00000002881.15	Nab1	chr1	protein_coding	Ngfi-A binding protein 1
chr1	52529795	52539369	-	52539156	52539369	A3SS&ES	0.33	50	50	ENSMUST00000186764.7	ENSMUSG00000002881.15	Nab1	chr1	protein_coding	Ngfi-A binding protein 1
chr1	52504106	52518397	-	52504106;52506138	52506049;52518397	ES	0.5	50	50	ENSMUST00000069792.14	ENSMUSG00000002881.15	Nab1	chr1	protein_coding	Ngfi-A binding protein 1
chr1	52529795	52539369	-	52529914	52539369	A3SS	0.33	50	50	ENSMUST00000069792.14	ENSMUSG00000002881.15	Nab1	chr1	protein_coding	Ngfi-A binding protein 1
chr1	52504106	52518397	-	52504106	52506049	5pMXE	0.5	50	50	ENSMUST00000167732.2	ENSMUSG00000002881.15	Nab1	chr1	protein_coding	Ngfi-A binding protein 1
chr1	52681571	52684420	+	52681571;52682395	52682281;52684420	ES	0.33	50	50	ENSMUST00000165859.8	ENSMUSG00000043015.16	Nemp2	chr1	protein_coding	nuclear envelope integral membrane protein 2
chr1	52681571	52682327	+	52681571	52682281	A3SS	0.33	50	50	ENSMUST00000165859.8	ENSMUSG00000043015.16	Nemp2	chr1	protein_coding	nuclear envelope integral membrane protein 2
chr1	52672100	52676524	+	52670010	52676524	A5SS	0.5	50	50	ENSMUST00000165859.8	ENSMUSG00000043015.16	Nemp2	chr1	protein_coding	nuclear envelope integral membrane protein 2
chr1	52681312	52681478	+	52680402	52681478	A5SS	0.5	50	50	ENSMUST00000165859.8	ENSMUSG00000043015.16	Nemp2	chr1	protein_coding	nuclear envelope integral membrane protein 2
chr1	52681571;52682395	52682327;52684420	+	52681571	52684420	cassetteExon	0.5	100	100	ENSMUST00000188507.7	ENSMUSG00000043015.16	Nemp2	chr1	protein_coding	nuclear envelope integral membrane protein 2
chr1	52676639;52684645	52684420;52687909	+	52676639	52687909	cassetteExon	0.5	100	100	ENSMUST00000190108.7	ENSMUSG00000043015.16	Nemp2	chr1	protein_coding	nuclear envelope integral membrane protein 2
chr1	52676639	52679988	+	52676639	52687909	A3SS	0.33	50	50	ENSMUST00000190108.7	ENSMUSG00000043015.16	Nemp2	chr1	protein_coding	nuclear envelope integral membrane protein 2
chr1	52676639	52679988	+	52676639	52684420	A3SS	0.33	50	50	ENSMUST00000185790.7	ENSMUSG00000043015.16	Nemp2	chr1	protein_coding	nuclear envelope integral membrane protein 2
chr1	52681571	52684420	+	52676639	52684420	A5SS	0.33	50	50	ENSMUST00000185790.7	ENSMUSG00000043015.16	Nemp2	chr1	protein_coding	nuclear envelope integral membrane protein 2
chr1	52682395	52684420	+	52676639	52684420	A5SS	0.33	50	50	ENSMUST00000185790.7	ENSMUSG00000043015.16	Nemp2	chr1	protein_coding	nuclear envelope integral membrane protein 2
chr1	52681571	52684420	+	52682395	52684420	A5SS	0.33	50	50	ENSMUST00000186903.7	ENSMUSG00000043015.16	Nemp2	chr1	protein_coding	nuclear envelope integral membrane protein 2
chr1	52676639	52687909	+	52684645	52687909	5pMXE	0.5	50	50	ENSMUST00000191076.2	ENSMUSG00000043015.16	Nemp2	chr1	protein_coding	nuclear envelope integral membrane protein 2
chr1	52697704;52697882	52697858;52699966	-	52697704	52699966	cassetteExon	0.5	100	100	ENSMUST00000156876.8	ENSMUSG00000041439.16	Mfsd6	chr1	protein_coding	major facilitator superfamily domain containing 6
chr1	52702605	52708328	-	52702605	52715637	A5SS	0.5	50	50	ENSMUST00000156876.8	ENSMUSG00000041439.16	Mfsd6	chr1	protein_coding	major facilitator superfamily domain containing 6
chr1	52833829	52838444	-	52833829;52836260	52836200;52838444	ES	0.5	50	50	ENSMUST00000027271.9	ENSMUSG00000026102.10	Inpp1	chr1	protein_coding	inositol polyphosphate-1-phosphatase
chr1	52838695	52839278	-	52838695	52856561	A5SS	0.33	50	50	ENSMUST00000027271.9	ENSMUSG00000026102.10	Inpp1	chr1	protein_coding	inositol polyphosphate-1-phosphatase
chr1	52838695	52856671	-	52838695	52856561	A5SS	0.33	50	50	ENSMUST00000027271.9	ENSMUSG00000026102.10	Inpp1	chr1	protein_coding	inositol polyphosphate-1-phosphatase
chr1	52838695	52839278	-	52838695	52856671	A5SS	0.33	50	50	ENSMUST00000162576.8	ENSMUSG00000026102.10	Inpp1	chr1	protein_coding	inositol polyphosphate-1-phosphatase
chr1	52833829	52838444	-	52836260	52838444	3pMXE	0.5	50	50	ENSMUST00000162351.2	ENSMUSG00000026102.10	Inpp1	chr1	protein_coding	inositol polyphosphate-1-phosphatase
chr1	52944611	52952890	+	52944611	52959422	A3SS	0.5	50	50	ENSMUST00000159352.8	ENSMUSG00000041426.13	Hibch	chr1	protein_coding	3-hydroxyisobutyryl-Coenzyme A hydrolase
chr1	52891060	52892827	+	52884303	52892827	A5SS	0.5	50	50	ENSMUST00000159352.8	ENSMUSG00000041426.13	Hibch	chr1	protein_coding	3-hydroxyisobutyryl-Coenzyme A hydrolase
chr1	52904306	52904708	+	52901511	52904708	A5SS	0.5	50	50	ENSMUST00000159352.8	ENSMUSG00000041426.13	Hibch	chr1	protein_coding	3-hydroxyisobutyryl-Coenzyme A hydrolase
chr1	52955829	52959422	+	52944611	52959422	A5SS	0.5	50	50	ENSMUST00000159352.8	ENSMUSG00000041426.13	Hibch	chr1	protein_coding	3-hydroxyisobutyryl-Coenzyme A hydrolase
chr1	52964893	52992356	-	52964893	52991774	5pMXE	0.14	50	50	ENSMUST00000050567.11	ENSMUSG00000043629.13	1700019D03Rik	chr1	protein_coding	RIKEN cDNA 1700019D03 gene
chr1	52964893	53002212	-	52964893	52991774	5pMXE	0.14	50	50	ENSMUST00000050567.11	ENSMUSG00000043629.13	1700019D03Rik	chr1	protein_coding	RIKEN cDNA 1700019D03 gene
chr1	52964893	53011130	-	52964893	52991774	5pMXE	0.14	50	50	ENSMUST00000050567.11	ENSMUSG00000043629.13	1700019D03Rik	chr1	protein_coding	RIKEN cDNA 1700019D03 gene
chr1	52964893	53029265	-	52964893	52991774	5pMXE	0.14	50	50	ENSMUST00000050567.11	ENSMUSG00000043629.13	1700019D03Rik	chr1	protein_coding	RIKEN cDNA 1700019D03 gene
chr1	52964893	53030428	-	52964893	52991774	5pMXE	0.14	50	50	ENSMUST00000050567.11	ENSMUSG00000043629.13	1700019D03Rik	chr1	protein_coding	RIKEN cDNA 1700019D03 gene
chr1	52964893	53059253	-	52964893	52991774	5pMXE	0.14	50	50	ENSMUST00000050567.11	ENSMUSG00000043629.13	1700019D03Rik	chr1	protein_coding	RIKEN cDNA 1700019D03 gene
chr1	52964893	53002212	-	52964893	52992356	5pMXE	0.14	50	50	ENSMUST00000114492.8	ENSMUSG00000043629.13	1700019D03Rik	chr1	protein_coding	RIKEN cDNA 1700019D03 gene
chr1	52964893	53011130	-	52964893	52992356	5pMXE	0.14	50	50	ENSMUST00000114492.8	ENSMUSG00000043629.13	1700019D03Rik	chr1	protein_coding	RIKEN cDNA 1700019D03 gene
chr1	52964893	53029265	-	52964893	52992356	5pMXE	0.14	50	50	ENSMUST00000114492.8	ENSMUSG00000043629.13	1700019D03Rik	chr1	protein_coding	RIKEN cDNA 1700019D03 gene
chr1	52964893	53030428	-	52964893	52992356	5pMXE	0.14	50	50	ENSMUST00000114492.8	ENSMUSG00000043629.13	1700019D03Rik	chr1	protein_coding	RIKEN cDNA 1700019D03 gene
chr1	52964893	53059253	-	52964893	52992356	5pMXE	0.14	50	50	ENSMUST00000114492.8	ENSMUSG00000043629.13	1700019D03Rik	chr1	protein_coding	RIKEN cDNA 1700019D03 gene
chr1	52964893	53011130	-	52964893	53002212	5pMXE	0.14	50	50	ENSMUST00000114493.2	ENSMUSG00000043629.13	1700019D03Rik	chr1	protein_coding	RIKEN cDNA 1700019D03 gene
chr1	52964893	53029265	-	52964893	53002212	5pMXE	0.14	50	50	ENSMUST00000114493.2	ENSMUSG00000043629.13	1700019D03Rik	chr1	protein_coding	RIKEN cDNA 1700019D03 gene
chr1	52964893	53030428	-	52964893	53002212	5pMXE	0.14	50	50	ENSMUST00000114493.2	ENSMUSG00000043629.13	1700019D03Rik	chr1	protein_coding	RIKEN cDNA 1700019D03 gene
chr1	52964893	53059253	-	52964893	53002212	5pMXE	0.14	50	50	ENSMUST00000114493.2	ENSMUSG00000043629.13	1700019D03Rik	chr1	protein_coding	RIKEN cDNA 1700019D03 gene
chr1	52964893	53011130	-	52964893	53059253	A5SS	0.14	50	50	ENSMUST00000191441.2	ENSMUSG00000043629.13	1700019D03Rik	chr1	protein_coding	RIKEN cDNA 1700019D03 gene
chr1	52964893	53029265	-	52964893	53059253	A5SS	0.14	50	50	ENSMUST00000191441.2	ENSMUSG00000043629.13	1700019D03Rik	chr1	protein_coding	RIKEN cDNA 1700019D03 gene
chr1	52964893	53030428	-	52964893	53059253	A5SS	0.14	50	50	ENSMUST00000191441.2	ENSMUSG00000043629.13	1700019D03Rik	chr1	protein_coding	RIKEN cDNA 1700019D03 gene
chr1	52964893;53029323	53029265;53030428	-	52964893	53030428	cassetteExon	0.5	100	100	ENSMUST00000190831.7	ENSMUSG00000043629.13	1700019D03Rik	chr1	protein_coding	RIKEN cDNA 1700019D03 gene
chr1	52964893	53011130	-	52964893	53030428	A5SS	0.16	50	50	ENSMUST00000190831.7	ENSMUSG00000043629.13	1700019D03Rik	chr1	protein_coding	RIKEN cDNA 1700019D03 gene
chr1	52964893	53029265	-	52964893	53011130	5pMXE	0.14	50	50	ENSMUST00000186266.2	ENSMUSG00000043629.13	1700019D03Rik	chr1	protein_coding	RIKEN cDNA 1700019D03 gene
chr1	53103222	53105410	+	53103415	53105410	A5SS	0.5	50	50	ENSMUST00000027269.7	ENSMUSG00000026100.7	Mstn	chr1	protein_coding	myostatin
chr1	53224449;53226617	53226487;53226713	-	53224449	53226713	cassetteExon	0.5	100	100	ENSMUST00000072235.10	ENSMUSG00000060715.10	1700019A02Rik	chr1	protein_coding	RIKEN cDNA 1700019A02 gene
chr1	53321251;53329582	53329538;53336045	-	53321251	53336045	cassetteExon	0.5	100	100	ENSMUST00000027267.14	ENSMUSG00000026098.14	Pms1	chr1	protein_coding	PMS1 homolog 1, mismatch repair system component
chr1	53304587	53306987	-	53295951	53306987	A3SS	0.5	50	50	ENSMUST00000027267.14	ENSMUSG00000026098.14	Pms1	chr1	protein_coding	PMS1 homolog 1, mismatch repair system component
chr1	53321251	53335891	-	53321251	53336045	A5SS	0.25	50	50	ENSMUST00000027267.14	ENSMUSG00000026098.14	Pms1	chr1	protein_coding	PMS1 homolog 1, mismatch repair system component
chr1	53321251	53335978	-	53321251	53336045	A5SS	0.25	50	50	ENSMUST00000027267.14	ENSMUSG00000026098.14	Pms1	chr1	protein_coding	PMS1 homolog 1, mismatch repair system component
chr1	53321251	53335891	-	53321251	53329538	A5SS&ES	0.25	50	50	ENSMUST00000135246.8	ENSMUSG00000026098.14	Pms1	chr1	protein_coding	PMS1 homolog 1, mismatch repair system component
chr1	53321251	53335978	-	53321251	53329538	A5SS&ES	0.25	50	50	ENSMUST00000135246.8	ENSMUSG00000026098.14	Pms1	chr1	protein_coding	PMS1 homolog 1, mismatch repair system component
chr1	53329582	53335891	-	53329582	53336045	A5SS	0.5	50	50	ENSMUST00000135246.8	ENSMUSG00000026098.14	Pms1	chr1	protein_coding	PMS1 homolog 1, mismatch repair system component
chr1	53321251;53329582	53329538;53335891	-	53321251	53335891	cassetteExon	0.5	100	100	ENSMUST00000128337.8	ENSMUSG00000026098.14	Pms1	chr1	protein_coding	PMS1 homolog 1, mismatch repair system component
chr1	53321251	53335978	-	53321251	53335891	A5SS	0.25	50	50	ENSMUST00000128337.8	ENSMUSG00000026098.14	Pms1	chr1	protein_coding	PMS1 homolog 1, mismatch repair system component
chr1	53321251	53336045	-	53321251	53329538	A5SS&ES	0.25	50	50	ENSMUST00000126412.2	ENSMUSG00000026098.14	Pms1	chr1	protein_coding	PMS1 homolog 1, mismatch repair system component
chr1	53344765	53354019	+	53344765	53347986	3pMXE	0.5	50	50	ENSMUST00000027266.4	ENSMUSG00000026097.10	Ormdl1	chr1	protein_coding	ORM1-like 1 (S. cerevisiae)
chr1	53354258	53355640	+	53354258	53357061	A3SS	0.33	50	50	ENSMUST00000190734.2	ENSMUSG00000100679.2	Gm28778	chr1	protein_coding	predicted gene 28778
chr1	53354258	53357066	+	53354258	53357061	A3SS	0.33	50	50	ENSMUST00000190734.2	ENSMUSG00000100679.2	Gm28778	chr1	protein_coding	predicted gene 28778
chr1	53360369	53362326	+	53360369;53360726	53360655;53362326	ES	0.5	50	50	ENSMUST00000027265.10	ENSMUSG00000026096.15	Osgepl1	chr1	protein_coding	O-sialoglycoprotein endopeptidase-like 1
chr1	53360369;53360543	53360464;53360655	+	53360369	53360655	cassetteExon	0.5	100	100	ENSMUST00000027265.10	ENSMUSG00000026096.15	Osgepl1	chr1	protein_coding	O-sialoglycoprotein endopeptidase-like 1
chr1	53360369;53360726	53360464;53362326	+	53360369	53362326	cassetteExon	0.5	100	100	ENSMUST00000151296.8	ENSMUSG00000026096.15	Osgepl1	chr1	protein_coding	O-sialoglycoprotein endopeptidase-like 1
chr1	53354258	53355640	+	53354258	53357066	A3SS	0.33	50	50	ENSMUST00000151296.8	ENSMUSG00000026096.15	Osgepl1	chr1	protein_coding	O-sialoglycoprotein endopeptidase-like 1
chr1	53365616;53367272	53367228;53369371	-	53365616	53369371	cassetteExon	0.5	100	100	ENSMUST00000144660.3	ENSMUSG00000099913.2	Gm28551	chr1	protein_coding	predicted gene 28551
chr1	53390092;53391581	53391401;53391689	-	53390092	53391689	cassetteExon	0.5	100	100	ENSMUST00000144660.3	ENSMUSG00000099913.2	Gm28551	chr1	protein_coding	predicted gene 28551
chr1	53384138	53385739	-	53369567	53385739	A3SS	0.5	50	50	ENSMUST00000144660.3	ENSMUSG00000099913.2	Gm28551	chr1	protein_coding	predicted gene 28551
chr1	53369567	53370043	-	53369567	53385739	A5SS	0.33	50	50	ENSMUST00000144660.3	ENSMUSG00000099913.2	Gm28551	chr1	protein_coding	predicted gene 28551
chr1	53369567	53381132	-	53369567	53385739	A5SS	0.33	50	50	ENSMUST00000144660.3	ENSMUSG00000099913.2	Gm28551	chr1	protein_coding	predicted gene 28551
chr1	53385920	53387605	-	53385920	53386174	A5SS	0.5	50	50	ENSMUST00000144660.3	ENSMUSG00000099913.2	Gm28551	chr1	protein_coding	predicted gene 28551
chr1	53369567	53370043	-	53369567	53381132	A5SS	0.33	50	50	ENSMUST00000186588.2	ENSMUSG00000101838.7	Gm18800	chr1	transcribed_unprocessed_pseudogene	predicted gene, 18800
chr1	53737687	53737791	-	53725766	53737791	A3SS	0.5	50	50	ENSMUST00000094964.7	ENSMUSG00000096141.3	Dnah7a	chr1	protein_coding	dynein, axonemal, heavy chain 7A
chr1	53810981	53824233	-	53810981;53815838	53815676;53824233	ES	0.5	50	50	ENSMUST00000027263.14	ENSMUSG00000026094.15	Stk17b	chr1	protein_coding	serine/threonine kinase 17b (apoptosis-inducing)
chr1	54079686	54234135	-	54079686	54233063	5pMXE	0.5	50	50	ENSMUST00000120904.8	ENSMUSG00000042807.16	Hecw2	chr1	protein_coding	HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
chr1	53880025	53880280	-	53880025	53890732	A5SS	0.5	50	50	ENSMUST00000120904.8	ENSMUSG00000042807.16	Hecw2	chr1	protein_coding	HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
chr1	53904309	53905599	-	53904309	53907995	A5SS	0.5	50	50	ENSMUST00000120904.8	ENSMUSG00000042807.16	Hecw2	chr1	protein_coding	HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
chr1	54353375	54360076	+	54353375	54368116	A3SS	0.5	50	50	ENSMUST00000027128.11	ENSMUSG00000025983.12	Ccdc150	chr1	protein_coding	coiled-coil domain containing 150
chr1	54405378	54406918	+	54405378	54407073	A3SS	0.5	50	50	ENSMUST00000027128.11	ENSMUSG00000025983.12	Ccdc150	chr1	protein_coding	coiled-coil domain containing 150
chr1	54364417	54368116	+	54353375	54368116	A5SS	0.5	50	50	ENSMUST00000027128.11	ENSMUSG00000025983.12	Ccdc150	chr1	protein_coding	coiled-coil domain containing 150
chr1	54369625	54392155	+	54368704	54392155	A5SS	0.5	50	50	ENSMUST00000027128.11	ENSMUSG00000025983.12	Ccdc150	chr1	protein_coding	coiled-coil domain containing 150
chr1	54688759	54690828	-	54687494	54690828	A3SS	0.5	50	50	ENSMUST00000179030.8	ENSMUSG00000052331.15	Ankrd44	chr1	protein_coding	ankyrin repeat domain 44
chr1	54774272	54775389	-	54774218	54775389	A3SS	0.5	50	50	ENSMUST00000179030.8	ENSMUSG00000052331.15	Ankrd44	chr1	protein_coding	ankyrin repeat domain 44
chr1	54800324	54801420	-	54792127	54801420	A3SS	0.5	50	50	ENSMUST00000179030.8	ENSMUSG00000052331.15	Ankrd44	chr1	protein_coding	ankyrin repeat domain 44
chr1	54720350	54730060	-	54720350	54762173	A5SS	0.5	50	50	ENSMUST00000179030.8	ENSMUSG00000052331.15	Ankrd44	chr1	protein_coding	ankyrin repeat domain 44
chr1	54806143	54807867	-	54806143	54817446	A5SS	0.5	50	50	ENSMUST00000179030.8	ENSMUSG00000052331.15	Ankrd44	chr1	protein_coding	ankyrin repeat domain 44
chr1	54831690	54852524	-	54831690	54867771	A5SS	0.5	50	50	ENSMUST00000179030.8	ENSMUSG00000052331.15	Ankrd44	chr1	protein_coding	ankyrin repeat domain 44
chr1	54867854	54923779	-	54867854	54965299	A5SS	0.5	50	50	ENSMUST00000179030.8	ENSMUSG00000052331.15	Ankrd44	chr1	protein_coding	ankyrin repeat domain 44
chr1	54768728	54804748	+	54768728	54775857	3pMXE	0.5	50	50	ENSMUST00000190007.7	ENSMUSG00000101674.7	4930444A19Rik	chr1	lncRNA	RIKEN cDNA 4930444A19 gene
chr1	54729751	54768645	+	54756809	54768645	A5SS&ES	0.5	50	50	ENSMUST00000190007.7	ENSMUSG00000101674.7	4930444A19Rik	chr1	lncRNA	RIKEN cDNA 4930444A19 gene
chr1	55053721;55054083	55054028;55055535	-	55053721	55055535	cassetteExon	0.5	100	100	ENSMUST00000027127.14	ENSMUSG00000025982.14	Sf3b1	chr1	protein_coding	splicing factor 3b, subunit 1
chr1	55055341	55055535	-	55053721	55055535	A3SS	0.33	50	50	ENSMUST00000027127.14	ENSMUSG00000025982.14	Sf3b1	chr1	protein_coding	splicing factor 3b, subunit 1
chr1	55053721	55055535	-	55053721	55054028	5pMXE	0.5	50	50	ENSMUST00000188859.7	ENSMUSG00000025982.14	Sf3b1	chr1	protein_coding	splicing factor 3b, subunit 1
chr1	55055341	55055535	-	55054083	55055535	A3SS	0.33	50	50	ENSMUST00000191303.2	ENSMUSG00000025982.14	Sf3b1	chr1	protein_coding	splicing factor 3b, subunit 1
chr1	55092149;55100583	55100434;55103340	+	55092149	55103340	cassetteExon	0.5	100	100	ENSMUST00000087617.11	ENSMUSG00000025981.14	Coq10b	chr1	protein_coding	coenzyme Q10B
chr1	55126100	55127304	-	55126100	55126938	5pMXE	0.33	50	50	ENSMUST00000027123.15	ENSMUSG00000025980.15	Hspd1	chr1	protein_coding	heat shock protein 1 (chaperonin)
chr1	55126100	55127148	-	55126100	55126938	A5SS	0.33	50	50	ENSMUST00000027123.15	ENSMUSG00000025980.15	Hspd1	chr1	protein_coding	heat shock protein 1 (chaperonin)
chr1	55126100	55127304	-	55126100	55127148	A5SS	0.33	50	50	ENSMUST00000127861.8	ENSMUSG00000025980.15	Hspd1	chr1	protein_coding	heat shock protein 1 (chaperonin)
chr1	55170518;55175898	55175836;55184283	+	55170518	55184283	cassetteExon	0.5	100	100	ENSMUST00000159311.8	ENSMUSG00000025979.14	Mob4	chr1	protein_coding	MOB family member 4, phocein
chr1	55170518;55175898	55175836;55187478	+	55170518;55184383	55184283;55187478	MXE	0.5	100	100	ENSMUST00000159311.8	ENSMUSG00000025979.14	Mob4	chr1	protein_coding	MOB family member 4, phocein
chr1	55170518;55175898	55175836;55187707	+	55170518;55187520	55184283;55187707	MXE	0.5	100	100	ENSMUST00000159311.8	ENSMUSG00000025979.14	Mob4	chr1	protein_coding	MOB family member 4, phocein
chr1	55175898	55187478	+	55175898;55184383	55184283;55187478	ES	0.5	50	50	ENSMUST00000162364.8	ENSMUSG00000025979.14	Mob4	chr1	protein_coding	MOB family member 4, phocein
chr1	55170784	55175836	+	55170518	55175836	A5SS	0.5	50	50	ENSMUST00000162364.8	ENSMUSG00000025979.14	Mob4	chr1	protein_coding	MOB family member 4, phocein
chr1	55175898;55187520	55187478;55187707	+	55175898	55187707	cassetteExon	0.5	100	100	ENSMUST00000027122.14	ENSMUSG00000025979.14	Mob4	chr1	protein_coding	MOB family member 4, phocein
chr1	55170518	55184283	+	55170518	55175836	A3SS&ES	0.5	50	50	ENSMUST00000027122.14	ENSMUSG00000025979.14	Mob4	chr1	protein_coding	MOB family member 4, phocein
chr1	55175898	55184283	+	55175898	55187707	A3SS	0.33	50	50	ENSMUST00000027122.14	ENSMUSG00000025979.14	Mob4	chr1	protein_coding	MOB family member 4, phocein
chr1	55170518	55184283	+	55175898	55184283	A5SS&ES	0.5	50	50	ENSMUST00000162553.2	ENSMUSG00000025979.14	Mob4	chr1	protein_coding	MOB family member 4, phocein
chr1	55175898	55187478	+	55175898	55184283	3pMXE	0.33	50	50	ENSMUST00000159743.2	ENSMUSG00000025979.14	Mob4	chr1	protein_coding	MOB family member 4, phocein
chr1	55234796;55240581	55240504;55243342	-	55234796	55243342	cassetteExon	0.5	100	100	ENSMUST00000027121.15	ENSMUSG00000025978.15	Rftn2	chr1	protein_coding	raftlin family member 2
chr1	55241373	55243342	-	55234796	55243342	A3SS	0.33	50	50	ENSMUST00000027121.15	ENSMUSG00000025978.15	Rftn2	chr1	protein_coding	raftlin family member 2
chr1	55264414	55265280	-	55253462	55265280	A3SS	0.33	50	50	ENSMUST00000027121.15	ENSMUSG00000025978.15	Rftn2	chr1	protein_coding	raftlin family member 2
chr1	55241373	55243342	-	55240581	55243342	A3SS	0.33	50	50	ENSMUST00000132055.8	ENSMUSG00000025978.15	Rftn2	chr1	protein_coding	raftlin family member 2
chr1	55253462	55265280	-	55245774	55265280	A3SS	0.33	50	50	ENSMUST00000132055.8	ENSMUSG00000025978.15	Rftn2	chr1	protein_coding	raftlin family member 2
chr1	55264414	55265280	-	55245774	55265280	A3SS	0.33	50	50	ENSMUST00000132055.8	ENSMUSG00000025978.15	Rftn2	chr1	protein_coding	raftlin family member 2
chr1	55245774	55250309	-	55245774	55265280	A5SS	0.5	50	50	ENSMUST00000132055.8	ENSMUSG00000025978.15	Rftn2	chr1	protein_coding	raftlin family member 2
chr1	55267851	55274088	+	55267851	55273536	A3SS	0.5	50	50	ENSMUST00000181563.2	ENSMUSG00000097649.3	Gm10561	chr1	lncRNA	predicted gene 10561
chr1	55388094	55399775	-	55388094;55394898	55394807;55399775	ES	0.5	50	50	ENSMUST00000173983.8	ENSMUSG00000025977.16	Boll	chr1	protein_coding	boule homolog, RNA binding protein
chr1	55399918	55402458	-	55399918	55401641	5pMXE	0.5	50	50	ENSMUST00000114423.7	ENSMUSG00000025977.16	Boll	chr1	protein_coding	boule homolog, RNA binding protein
chr1	55388094	55394807	-	55379759	55394807	A3SS	0.5	50	50	ENSMUST00000159564.9	ENSMUSG00000025977.16	Boll	chr1	protein_coding	boule homolog, RNA binding protein
chr1	55388094	55399775	-	55394898	55399775	A3SS&ES	0.5	50	50	ENSMUST00000159564.9	ENSMUSG00000025977.16	Boll	chr1	protein_coding	boule homolog, RNA binding protein
chr1	55379759	55385536	-	55379759	55394807	A5SS	0.5	50	50	ENSMUST00000159564.9	ENSMUSG00000025977.16	Boll	chr1	protein_coding	boule homolog, RNA binding protein
chr1	55754762	55774280	+	55754762	55790440	A3SS	0.5	50	50	ENSMUST00000042986.10	ENSMUSG00000038349.11	Plcl1	chr1	protein_coding	phospholipase C-like 1
chr1	56000321;56009811	56009674;56010239	+	56000321	56010239	cassetteExon	0.5	100	100	ENSMUST00000189293.2	ENSMUSG00000099950.2	9130227L01Rik	chr1	lncRNA	RIKEN cDNA 9130227L01 gene
chr1	56058212	56058957	+	56058212	56059015	A3SS	0.5	50	50	ENSMUST00000186048.2	ENSMUSG00000100372.2	1700003I22Rik	chr1	lncRNA	RIKEN cDNA 1700003I22 gene
chr1	57009039	57013398	-	57009039	57010271	5pMXE	0.5	50	50	ENSMUST00000042857.14	ENSMUSG00000038331.16	Satb2	chr1	protein_coding	special AT-rich sequence binding protein 2
chr1	56910943;56987414	56987238;57008812	-	56910943;56938276	56930322;57008812	MXE	0.5	100	100	ENSMUST00000042857.14	ENSMUSG00000038331.16	Satb2	chr1	protein_coding	special AT-rich sequence binding protein 2
chr1	56938276;56987414	56987238;57008812	-	56938276	57008812	cassetteExon	0.5	100	100	ENSMUST00000042857.14	ENSMUSG00000038331.16	Satb2	chr1	protein_coding	special AT-rich sequence binding protein 2
chr1	56987414	57008791	-	56987414	57008812	A5SS	0.5	50	50	ENSMUST00000114415.10	ENSMUSG00000038331.16	Satb2	chr1	protein_coding	special AT-rich sequence binding protein 2
chr1	56938276	56987238	-	56910943	56987238	A3SS	0.5	50	50	ENSMUST00000177424.2	ENSMUSG00000038331.16	Satb2	chr1	protein_coding	special AT-rich sequence binding protein 2
chr1	56938276	57008812	-	56987414	57008812	A3SS&ES	0.5	50	50	ENSMUST00000177424.2	ENSMUSG00000038331.16	Satb2	chr1	protein_coding	special AT-rich sequence binding protein 2
chr1	56910943	56930322	-	56910943	56987238	A5SS	0.5	50	50	ENSMUST00000177424.2	ENSMUSG00000038331.16	Satb2	chr1	protein_coding	special AT-rich sequence binding protein 2
chr1	57010930	57041663	+	57010930	57013417	3pMXE	0.33	50	50	ENSMUST00000135238.4	ENSMUSG00000087022.5	9130024F11Rik	chr1	lncRNA	RIKEN cDNA 9130024F11 gene
chr1	57010930	57012545	+	57010930	57013417	A3SS	0.33	50	50	ENSMUST00000135238.4	ENSMUSG00000087022.5	9130024F11Rik	chr1	lncRNA	RIKEN cDNA 9130024F11 gene
chr1	57010930	57041663	+	57010930	57012545	3pMXE	0.33	50	50	ENSMUST00000187927.2	ENSMUSG00000087022.5	9130024F11Rik	chr1	lncRNA	RIKEN cDNA 9130024F11 gene
chr1	57417105	57418866	+	57417105	57421902	A3SS	0.33	50	50	ENSMUST00000042734.3	ENSMUSG00000038323.4	1700066M21Rik	chr1	protein_coding	RIKEN cDNA 1700066M21 gene
chr1	57417105	57419201	+	57417105	57421902	A3SS	0.33	50	50	ENSMUST00000042734.3	ENSMUSG00000038323.4	1700066M21Rik	chr1	protein_coding	RIKEN cDNA 1700066M21 gene
chr1	57417105	57419201	+	57417105;57418971	57418866;57419201	ES	0.5	50	50	ENSMUST00000185952.2	ENSMUSG00000038323.4	1700066M21Rik	chr1	protein_coding	RIKEN cDNA 1700066M21 gene
chr1	57429917	57432509	-	57429917;57430695	57430608;57432509	ES	0.33	50	50	ENSMUST00000162686.8	ENSMUSG00000048495.17	Tyw5	chr1	protein_coding	tRNA-yW synthesizing protein 5
chr1	57432646;57432853	57432744;57433206	-	57432646	57433206	cassetteExon	0.5	100	100	ENSMUST00000162686.8	ENSMUSG00000048495.17	Tyw5	chr1	protein_coding	tRNA-yW synthesizing protein 5
chr1	57432646;57432853	57432829;57433206	-	57432646	57433206	cassetteExon	0.5	100	100	ENSMUST00000162686.8	ENSMUSG00000048495.17	Tyw5	chr1	protein_coding	tRNA-yW synthesizing protein 5
chr1	57430670	57432509	-	57430695	57432509	A3SS	0.33	50	50	ENSMUST00000162686.8	ENSMUSG00000048495.17	Tyw5	chr1	protein_coding	tRNA-yW synthesizing protein 5
chr1	57435955	57440547	-	57435955	57440528	A5SS	0.5	50	50	ENSMUST00000162686.8	ENSMUSG00000048495.17	Tyw5	chr1	protein_coding	tRNA-yW synthesizing protein 5
chr1	57429917	57432509	-	57429917;57430670	57430608;57432509	ES	0.33	50	50	ENSMUST00000161727.8	ENSMUSG00000048495.17	Tyw5	chr1	protein_coding	tRNA-yW synthesizing protein 5
chr1	57432646	57432744	-	57432646	57432829	A5SS	0.33	50	50	ENSMUST00000160837.8	ENSMUSG00000048495.17	Tyw5	chr1	protein_coding	tRNA-yW synthesizing protein 5
chr1	57429917	57432509	-	57429917	57430608	5pMXE	0.5	50	50	ENSMUST00000161092.2	ENSMUSG00000048495.17	Tyw5	chr1	protein_coding	tRNA-yW synthesizing protein 5
chr1	57429917	57432509	-	57430695	57432509	3pMXE	0.33	50	50	ENSMUST00000160118.5	ENSMUSG00000048495.17	Tyw5	chr1	protein_coding	tRNA-yW synthesizing protein 5
chr1	57838513	57894623	+	57838513;57871296	57871212;57894623	ES	0.33	50	50	ENSMUST00000172287.8	ENSMUSG00000038305.16	Spats2l	chr1	protein_coding	spermatogenesis associated, serine-rich 2-like
chr1	57813650	57838464	+	57813722	57838464	A5SS	0.25	50	50	ENSMUST00000172287.8	ENSMUSG00000038305.16	Spats2l	chr1	protein_coding	spermatogenesis associated, serine-rich 2-like
chr1	57813960	57838464	+	57813722	57838464	A5SS	0.25	50	50	ENSMUST00000172287.8	ENSMUSG00000038305.16	Spats2l	chr1	protein_coding	spermatogenesis associated, serine-rich 2-like
chr1	57814183	57838464	+	57813722	57838464	A5SS	0.25	50	50	ENSMUST00000172287.8	ENSMUSG00000038305.16	Spats2l	chr1	protein_coding	spermatogenesis associated, serine-rich 2-like
chr1	57884842	57894623	+	57871296	57894623	A5SS	0.33	50	50	ENSMUST00000172287.8	ENSMUSG00000038305.16	Spats2l	chr1	protein_coding	spermatogenesis associated, serine-rich 2-like
chr1	57813960	57838464	+	57813650	57838464	A5SS	0.25	50	50	ENSMUST00000168905.8	ENSMUSG00000038305.16	Spats2l	chr1	protein_coding	spermatogenesis associated, serine-rich 2-like
chr1	57814183	57838464	+	57813650	57838464	A5SS	0.25	50	50	ENSMUST00000168905.8	ENSMUSG00000038305.16	Spats2l	chr1	protein_coding	spermatogenesis associated, serine-rich 2-like
chr1	57925108	57941248	+	57925108;57939999	57939793;57941248	ES	0.5	50	50	ENSMUST00000172068.8	ENSMUSG00000038305.16	Spats2l	chr1	protein_coding	spermatogenesis associated, serine-rich 2-like
chr1	57838513;57894683	57894623;57918667	+	57838513	57918667	cassetteExon	0.5	100	100	ENSMUST00000163239.8	ENSMUSG00000038305.16	Spats2l	chr1	protein_coding	spermatogenesis associated, serine-rich 2-like
chr1	57838513	57871212	+	57838513	57918667	A3SS	0.33	50	50	ENSMUST00000163239.8	ENSMUSG00000038305.16	Spats2l	chr1	protein_coding	spermatogenesis associated, serine-rich 2-like
chr1	57982400	57985227	+	57982400	57985230	A3SS	0.5	50	50	ENSMUST00000163239.8	ENSMUSG00000038305.16	Spats2l	chr1	protein_coding	spermatogenesis associated, serine-rich 2-like
chr1	57814183	57838464	+	57813960	57838464	A5SS	0.25	50	50	ENSMUST00000167971.8	ENSMUSG00000038305.16	Spats2l	chr1	protein_coding	spermatogenesis associated, serine-rich 2-like
chr1	57884842	57894623	+	57838513	57894623	A5SS	0.33	50	50	ENSMUST00000170139.8	ENSMUSG00000038305.16	Spats2l	chr1	protein_coding	spermatogenesis associated, serine-rich 2-like
chr1	57838513	57894623	+	57838513	57871212	3pMXE	0.33	50	50	ENSMUST00000165235.2	ENSMUSG00000038305.16	Spats2l	chr1	protein_coding	spermatogenesis associated, serine-rich 2-like
chr1	58006882	58042026	-	58006882	58009180	5pMXE	0.33	50	50	ENSMUST00000164963.8	ENSMUSG00000054770.17	Kctd18	chr1	protein_coding	potassium channel tetramerisation domain containing 18
chr1	58004699	58006656	-	57998404	58006656	A3SS	0.5	50	50	ENSMUST00000164963.8	ENSMUSG00000054770.17	Kctd18	chr1	protein_coding	potassium channel tetramerisation domain containing 18
chr1	57998404	58001060	-	57998404	58006656	A5SS	0.5	50	50	ENSMUST00000164963.8	ENSMUSG00000054770.17	Kctd18	chr1	protein_coding	potassium channel tetramerisation domain containing 18
chr1	58006882	58008566	-	58006882	58009180	A5SS	0.33	50	50	ENSMUST00000164963.8	ENSMUSG00000054770.17	Kctd18	chr1	protein_coding	potassium channel tetramerisation domain containing 18
chr1	58002420	58004510	-	58002420	58004488	A5SS	0.5	50	50	ENSMUST00000114410.10	ENSMUSG00000054770.17	Kctd18	chr1	protein_coding	potassium channel tetramerisation domain containing 18
chr1	58006882	58042026	-	58006882	58008566	5pMXE	0.33	50	50	ENSMUST00000161608.8	ENSMUSG00000054770.17	Kctd18	chr1	protein_coding	potassium channel tetramerisation domain containing 18
chr1	58158212	58158640	+	58157853	58158640	A5SS	0.5	50	50	ENSMUST00000040999.14	ENSMUSG00000064294.13	Aox3	chr1	protein_coding	aldehyde oxidase 3
chr1	58252238	58253763	+	58252238	58256592	A3SS	0.5	50	50	ENSMUST00000040442.6	ENSMUSG00000038242.13	Aox4	chr1	protein_coding	aldehyde oxidase 4
chr1	58298329	58299077	+	58298329	58301724	A3SS	0.5	50	50	ENSMUST00000040442.6	ENSMUSG00000038242.13	Aox4	chr1	protein_coding	aldehyde oxidase 4
chr1	58433434	58438163	+	58433434;58437011	58436835;58438163	ES	0.5	50	50	ENSMUST00000050552.15	ENSMUSG00000051223.15	Bzw1	chr1	protein_coding	basic leucine zipper and W2 domains 1
chr1	58432785	58433361	+	58432375	58433361	A5SS	0.5	50	50	ENSMUST00000050552.15	ENSMUSG00000051223.15	Bzw1	chr1	protein_coding	basic leucine zipper and W2 domains 1
chr1	58433434;58437011	58436835;58439866	+	58433434;58439303	58438163;58439866	MXE	0.5	100	100	ENSMUST00000188898.7	ENSMUSG00000051223.15	Bzw1	chr1	protein_coding	basic leucine zipper and W2 domains 1
chr1	58433434	58438163	+	58433434	58436835	A3SS&ES	0.5	50	50	ENSMUST00000188630.7	ENSMUSG00000051223.15	Bzw1	chr1	protein_coding	basic leucine zipper and W2 domains 1
chr1	58437011	58438163	+	58437011	58439866	A3SS	0.5	50	50	ENSMUST00000188630.7	ENSMUSG00000051223.15	Bzw1	chr1	protein_coding	basic leucine zipper and W2 domains 1
chr1	58439303	58439866	+	58437011	58439866	A5SS	0.5	50	50	ENSMUST00000188630.7	ENSMUSG00000051223.15	Bzw1	chr1	protein_coding	basic leucine zipper and W2 domains 1
chr1	58453843	58456426	-	58453843;58456338	58456172;58456426	ES	0.5	50	50	ENSMUST00000156931.8	ENSMUSG00000026034.18	Clk1	chr1	protein_coding	CDC-like kinase 1
chr1	58458892	58460242	-	58458892;58459370	58459280;58460242	ES	0.5	50	50	ENSMUST00000034868.14	ENSMUSG00000026034.18	Clk1	chr1	protein_coding	CDC-like kinase 1
chr1	58458892	58460242	-	58458892	58459280	5pMXE	0.5	50	50	ENSMUST00000186552.7	ENSMUSG00000026034.18	Clk1	chr1	protein_coding	CDC-like kinase 1
chr1	58453843	58456426	-	58453843	58456172	A5SS	0.5	50	50	ENSMUST00000135380.2	ENSMUSG00000026034.18	Clk1	chr1	protein_coding	CDC-like kinase 1
chr1	58453843	58456426	-	58456338	58456426	3pMXE	0.5	50	50	ENSMUST00000131051.2	ENSMUSG00000026034.18	Clk1	chr1	protein_coding	CDC-like kinase 1
chr1	58470489	58471231	-	58470489	58473490	A5SS	0.5	50	50	ENSMUST00000117069.8	ENSMUSG00000026035.16	Ppil3	chr1	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 3
chr1	58483798	58484305	-	58483798	58483970	A5SS	0.2	50	50	ENSMUST00000117069.8	ENSMUSG00000026035.16	Ppil3	chr1	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 3
chr1	58483798	58484491	-	58483798	58483970	A5SS	0.2	50	50	ENSMUST00000117069.8	ENSMUSG00000026035.16	Ppil3	chr1	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 3
chr1	58483798	58484531	-	58483798	58483970	A5SS	0.2	50	50	ENSMUST00000117069.8	ENSMUSG00000026035.16	Ppil3	chr1	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 3
chr1	58483798	58484569	-	58483798	58483970	A5SS	0.2	50	50	ENSMUST00000117069.8	ENSMUSG00000026035.16	Ppil3	chr1	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 3
chr1	58483798	58484491	-	58483798	58484305	A5SS	0.2	50	50	ENSMUST00000114348.8	ENSMUSG00000026035.16	Ppil3	chr1	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 3
chr1	58483798	58484531	-	58483798	58484305	A5SS	0.2	50	50	ENSMUST00000114348.8	ENSMUSG00000026035.16	Ppil3	chr1	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 3
chr1	58483798	58484569	-	58483798	58484305	A5SS	0.2	50	50	ENSMUST00000114348.8	ENSMUSG00000026035.16	Ppil3	chr1	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 3
chr1	58483798	58484531	-	58483798	58484491	A5SS	0.2	50	50	ENSMUST00000081677.12	ENSMUSG00000026035.16	Ppil3	chr1	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 3
chr1	58483798	58484569	-	58483798	58484491	A5SS	0.2	50	50	ENSMUST00000081677.12	ENSMUSG00000026035.16	Ppil3	chr1	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 3
chr1	58483798	58484569	-	58483798	58484531	A5SS	0.2	50	50	ENSMUST00000190048.7	ENSMUSG00000026035.16	Ppil3	chr1	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 3
chr1	58497022	58520145	+	58497022	58500300	3pMXE	0.5	50	50	ENSMUST00000087521.13	ENSMUSG00000026036.18	Nif3l1	chr1	protein_coding	Ngg1 interacting factor 3-like 1 (S. pombe)
chr1	58487248;58488585	58488403;58489546	+	58487248	58489546	cassetteExon	0.5	100	100	ENSMUST00000087521.13	ENSMUSG00000026036.18	Nif3l1	chr1	protein_coding	Ngg1 interacting factor 3-like 1 (S. pombe)
chr1	58486705	58486793	+	58484793	58486793	A5SS	0.5	50	50	ENSMUST00000087521.13	ENSMUSG00000026036.18	Nif3l1	chr1	protein_coding	Ngg1 interacting factor 3-like 1 (S. pombe)
chr1	58487248	58489546	+	58488585	58489546	5pMXE	0.5	50	50	ENSMUST00000140723.2	ENSMUSG00000026036.18	Nif3l1	chr1	protein_coding	Ngg1 interacting factor 3-like 1 (S. pombe)
chr1	58536624	58540482	-	58536624;58539543	58539400;58540482	ES	0.5	50	50	ENSMUST00000027198.12	ENSMUSG00000026037.15	Orc2	chr1	protein_coding	origin recognition complex, subunit 2
chr1	58541043	58543931	-	58541049	58543931	A3SS	0.33	50	50	ENSMUST00000027198.12	ENSMUSG00000026037.15	Orc2	chr1	protein_coding	origin recognition complex, subunit 2
chr1	58536624	58543931	-	58536624	58540482	5pMXE	0.33	50	50	ENSMUST00000114325.8	ENSMUSG00000026037.15	Orc2	chr1	protein_coding	origin recognition complex, subunit 2
chr1	58541043	58543931	-	58536624	58543931	A3SS	0.33	50	50	ENSMUST00000190695.2	ENSMUSG00000026037.15	Orc2	chr1	protein_coding	origin recognition complex, subunit 2
chr1	58541049	58543931	-	58536624	58543931	A3SS	0.33	50	50	ENSMUST00000190695.2	ENSMUSG00000026037.15	Orc2	chr1	protein_coding	origin recognition complex, subunit 2
chr1	58536624	58539400	-	58536624	58543931	A5SS	0.33	50	50	ENSMUST00000190695.2	ENSMUSG00000026037.15	Orc2	chr1	protein_coding	origin recognition complex, subunit 2
chr1	58536624	58540482	-	58539543	58540482	3pMXE	0.5	50	50	ENSMUST00000191206.2	ENSMUSG00000026037.15	Orc2	chr1	protein_coding	origin recognition complex, subunit 2
chr1	58544390	58549730	+	58544386	58549730	A5SS	0.5	50	50	ENSMUST00000160947.2	ENSMUSG00000085054.3	Gm15834	chr1	lncRNA	predicted gene 15834
chr1	58597216	58625371	-	58597216;58605113	58605016;58625371	ES	0.5	50	50	ENSMUST00000161600.8	ENSMUSG00000038174.15	Fam126b	chr1	protein_coding	family with sequence similarity 126, member B
chr1	58569418;58573811	58573644;58574549	-	58569418	58574549	cassetteExon	0.5	100	100	ENSMUST00000161600.8	ENSMUSG00000038174.15	Fam126b	chr1	protein_coding	family with sequence similarity 126, member B
chr1	58591488;58595723	58595668;58596431	-	58591488	58596431	cassetteExon	0.5	100	100	ENSMUST00000161600.8	ENSMUSG00000038174.15	Fam126b	chr1	protein_coding	family with sequence similarity 126, member B
chr1	58597216;58601946	58601799;58605016	-	58597216	58605016	cassetteExon	0.5	100	100	ENSMUST00000161600.8	ENSMUSG00000038174.15	Fam126b	chr1	protein_coding	family with sequence similarity 126, member B
chr1	58597216	58604927	-	58597216	58605016	A5SS	0.25	50	50	ENSMUST00000161600.8	ENSMUSG00000038174.15	Fam126b	chr1	protein_coding	family with sequence similarity 126, member B
chr1	58605113	58625262	-	58605113	58625371	A5SS	0.5	50	50	ENSMUST00000161600.8	ENSMUSG00000038174.15	Fam126b	chr1	protein_coding	family with sequence similarity 126, member B
chr1	58597216	58625371	-	58597216	58605016	5pMXE	0.25	50	50	ENSMUST00000187717.7	ENSMUSG00000038174.15	Fam126b	chr1	protein_coding	family with sequence similarity 126, member B
chr1	58597216;58605113	58604927;58625371	-	58597216	58625371	cassetteExon	0.5	100	100	ENSMUST00000161000.2	ENSMUSG00000038174.15	Fam126b	chr1	protein_coding	family with sequence similarity 126, member B
chr1	58597216	58601799	-	58597216	58625371	A5SS	0.25	50	50	ENSMUST00000161000.2	ENSMUSG00000038174.15	Fam126b	chr1	protein_coding	family with sequence similarity 126, member B
chr1	58597216	58604927	-	58597216	58601799	A5SS&ES	0.25	50	50	ENSMUST00000160546.8	ENSMUSG00000038174.15	Fam126b	chr1	protein_coding	family with sequence similarity 126, member B
chr1	58597216	58625371	-	58605113	58625371	3pMXE	0.5	50	50	ENSMUST00000159185.2	ENSMUSG00000038174.15	Fam126b	chr1	protein_coding	family with sequence similarity 126, member B
chr1	58717538	58730072	-	58717538;58719156	58719023;58730072	ES	0.33	50	50	ENSMUST00000188772.7	ENSMUSG00000047528.14	Flacc1	chr1	protein_coding	flagellum associated containing coiled-coil domains 1
chr1	58698471	58700559	-	58686378	58700559	A3SS	0.5	50	50	ENSMUST00000188772.7	ENSMUSG00000047528.14	Flacc1	chr1	protein_coding	flagellum associated containing coiled-coil domains 1
chr1	58719152	58730072	-	58719156	58730072	A3SS	0.33	50	50	ENSMUST00000188772.7	ENSMUSG00000047528.14	Flacc1	chr1	protein_coding	flagellum associated containing coiled-coil domains 1
chr1	58731604	58734876	-	58731604	58735061	A5SS	0.5	50	50	ENSMUST00000188772.7	ENSMUSG00000047528.14	Flacc1	chr1	protein_coding	flagellum associated containing coiled-coil domains 1
chr1	58697589	58698155	-	58697593	58698155	A3SS	0.5	50	50	ENSMUST00000191565.7	ENSMUSG00000047528.14	Flacc1	chr1	protein_coding	flagellum associated containing coiled-coil domains 1
chr1	58717538	58730072	-	58717538;58719152	58719023;58730072	ES	0.33	50	50	ENSMUST00000191252.7	ENSMUSG00000047528.14	Flacc1	chr1	protein_coding	flagellum associated containing coiled-coil domains 1
chr1	58750751	58765465	+	58750751	58752455	3pMXE	0.33	50	50	ENSMUST00000149874.8	ENSMUSG00000026031.16	Cflar	chr1	protein_coding	CASP8 and FADD-like apoptosis regulator
chr1	58750751	58752730	+	58750751	58752455	A3SS	0.33	50	50	ENSMUST00000149874.8	ENSMUSG00000026031.16	Cflar	chr1	protein_coding	CASP8 and FADD-like apoptosis regulator
chr1	58750751	58765465	+	58750751;58752818	58752730;58765465	ES	0.5	50	50	ENSMUST00000140940.8	ENSMUSG00000026031.16	Cflar	chr1	protein_coding	CASP8 and FADD-like apoptosis regulator
chr1	58765891;58768320	58768215;58770311	+	58765891	58770311	cassetteExon	0.5	100	100	ENSMUST00000140940.8	ENSMUSG00000026031.16	Cflar	chr1	protein_coding	CASP8 and FADD-like apoptosis regulator
chr1	58752818	58756419	+	58752818	58765465	A3SS	0.33	50	50	ENSMUST00000140940.8	ENSMUSG00000026031.16	Cflar	chr1	protein_coding	CASP8 and FADD-like apoptosis regulator
chr1	58752818	58761488	+	58752818	58765465	A3SS	0.33	50	50	ENSMUST00000140940.8	ENSMUSG00000026031.16	Cflar	chr1	protein_coding	CASP8 and FADD-like apoptosis regulator
chr1	58769821	58770311	+	58765891	58770311	A5SS	0.33	50	50	ENSMUST00000140940.8	ENSMUSG00000026031.16	Cflar	chr1	protein_coding	CASP8 and FADD-like apoptosis regulator
chr1	58750751	58765465	+	58750751	58752730	3pMXE	0.33	50	50	ENSMUST00000124567.2	ENSMUSG00000026031.16	Cflar	chr1	protein_coding	CASP8 and FADD-like apoptosis regulator
chr1	58752818	58761488	+	58752818	58756419	3pMXE	0.33	50	50	ENSMUST00000097723.3	ENSMUSG00000026031.16	Cflar	chr1	protein_coding	CASP8 and FADD-like apoptosis regulator
chr1	58769821	58770311	+	58768320	58770311	A5SS	0.33	50	50	ENSMUST00000097722.9	ENSMUSG00000026031.16	Cflar	chr1	protein_coding	CASP8 and FADD-like apoptosis regulator
chr1	58750751;58752818	58752455;58765465	+	58750751	58765465	cassetteExon	0.5	100	100	ENSMUST00000114313.8	ENSMUSG00000026031.16	Cflar	chr1	protein_coding	CASP8 and FADD-like apoptosis regulator
chr1	58750751	58765465	+	58752818	58765465	5pMXE	0.5	50	50	ENSMUST00000114309.8	ENSMUSG00000026031.16	Cflar	chr1	protein_coding	CASP8 and FADD-like apoptosis regulator
chr1	58834897;58843273	58843158;58863074	+	58834897	58863074	cassetteExon	0.5	100	100	ENSMUST00000027189.15	ENSMUSG00000026029.15	Casp8	chr1	protein_coding	caspase 8
chr1	58841852	58863074	+	58834897	58863074	A5SS	0.33	50	50	ENSMUST00000027189.15	ENSMUSG00000026029.15	Casp8	chr1	protein_coding	caspase 8
chr1	58841852	58843158	+	58834897	58843158	A5SS	0.5	50	50	ENSMUST00000191201.7	ENSMUSG00000026029.15	Casp8	chr1	protein_coding	caspase 8
chr1	58841852	58863074	+	58843273	58863074	A5SS&ES	0.33	50	50	ENSMUST00000191201.7	ENSMUSG00000026029.15	Casp8	chr1	protein_coding	caspase 8
chr1	58841852;58843273	58843158;58863074	+	58841852	58863074	cassetteExon	0.5	100	100	ENSMUST00000165549.8	ENSMUSG00000026029.15	Casp8	chr1	protein_coding	caspase 8
chr1	58943341	58947682	-	58943341;58945970	58945865;58947682	ES	0.5	50	50	ENSMUST00000027186.12	ENSMUSG00000026028.13	Trak2	chr1	protein_coding	trafficking protein, kinesin binding 2
chr1	58965886	58985406	-	58965886;58975099	58974905;58985406	ES	0.5	50	50	ENSMUST00000027186.12	ENSMUSG00000026028.13	Trak2	chr1	protein_coding	trafficking protein, kinesin binding 2
chr1	58959207	58960233	-	58958510	58960233	A3SS	0.5	50	50	ENSMUST00000027186.12	ENSMUSG00000026028.13	Trak2	chr1	protein_coding	trafficking protein, kinesin binding 2
chr1	58943341	58947682	-	58943341	58945865	5pMXE	0.5	50	50	ENSMUST00000172685.2	ENSMUSG00000026028.13	Trak2	chr1	protein_coding	trafficking protein, kinesin binding 2
chr1	59019173;59019732	59019566;59024448	+	59019173	59024448	cassetteExon	0.5	100	100	ENSMUST00000147637.8	ENSMUSG00000026027.14	Stradb	chr1	protein_coding	STE20-related kinase adaptor beta
chr1	59030295;59031534	59031363;59031810	+	59030295	59031810	cassetteExon	0.5	100	100	ENSMUST00000123301.8	ENSMUSG00000026027.14	Stradb	chr1	protein_coding	STE20-related kinase adaptor beta
chr1	59031914	59032258	+	59031914	59032052	A3SS	0.5	50	50	ENSMUST00000123301.8	ENSMUSG00000026027.14	Stradb	chr1	protein_coding	STE20-related kinase adaptor beta
chr1	59046973	59049228	-	59036760	59049228	A3SS	0.5	50	50	ENSMUST00000238601.2	ENSMUSG00000072295.8	C2cd6	chr1	protein_coding	C2 calcium dependent domain containing 6
chr1	59036760	59042300	-	59036760	59049228	A5SS	0.5	50	50	ENSMUST00000238601.2	ENSMUSG00000072295.8	C2cd6	chr1	protein_coding	C2 calcium dependent domain containing 6
chr1	59117128	59123610	-	59117128	59133657	A5SS	0.5	50	50	ENSMUST00000238601.2	ENSMUSG00000072295.8	C2cd6	chr1	protein_coding	C2 calcium dependent domain containing 6
chr1	59036760	59049228	-	59036760;59046973	59042300;59049228	ES	0.5	50	50	ENSMUST00000238949.2	ENSMUSG00000072295.8	C2cd6	chr1	protein_coding	C2 calcium dependent domain containing 6
chr1	59075258	59076400	+	59075258	59097979	A3SS	0.5	50	50	ENSMUST00000188707.2	ENSMUSG00000099752.2	Gm29018	chr1	lncRNA	predicted gene 29018
chr1	59157165	59159477	-	59157165	59159111	5pMXE	0.25	50	50	ENSMUST00000094917.10	ENSMUSG00000038079.15	Tmem237	chr1	protein_coding	transmembrane protein 237
chr1	59155088;59156063	59156001;59156490	-	59155088	59156490	cassetteExon	0.5	100	100	ENSMUST00000094917.10	ENSMUSG00000038079.15	Tmem237	chr1	protein_coding	transmembrane protein 237
chr1	59157165	59158862	-	59157165	59159111	A5SS	0.25	50	50	ENSMUST00000094917.10	ENSMUSG00000038079.15	Tmem237	chr1	protein_coding	transmembrane protein 237
chr1	59157165	59159156	-	59157165	59159111	A5SS	0.25	50	50	ENSMUST00000094917.10	ENSMUSG00000038079.15	Tmem237	chr1	protein_coding	transmembrane protein 237
chr1	59157165	59159156	-	59157165	59158862	5pMXE	0.25	50	50	ENSMUST00000087475.11	ENSMUSG00000038079.15	Tmem237	chr1	protein_coding	transmembrane protein 237
chr1	59157165	59159477	-	59157165	59158862	5pMXE	0.25	50	50	ENSMUST00000087475.11	ENSMUSG00000038079.15	Tmem237	chr1	protein_coding	transmembrane protein 237
chr1	59157165	59159156	-	59157165	59159477	A5SS	0.25	50	50	ENSMUST00000186794.7	ENSMUSG00000038079.15	Tmem237	chr1	protein_coding	transmembrane protein 237
chr1	59171122;59173434	59173374;59178921	-	59171122;59176018	59172974;59178921	MXE	0.5	100	100	ENSMUST00000191200.7	ENSMUSG00000079550.10	Mpp4	chr1	protein_coding	membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
chr1	59178959;59180120	59180103;59182915	-	59178959	59182915	cassetteExon	0.5	100	100	ENSMUST00000191200.7	ENSMUSG00000079550.10	Mpp4	chr1	protein_coding	membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
chr1	59178959;59182871	59182854;59182915	-	59178959	59182915	cassetteExon	0.5	100	100	ENSMUST00000191200.7	ENSMUSG00000079550.10	Mpp4	chr1	protein_coding	membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
chr1	59196654;59196998	59196917;59197745	-	59196654	59197745	cassetteExon	0.5	100	100	ENSMUST00000191200.7	ENSMUSG00000079550.10	Mpp4	chr1	protein_coding	membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
chr1	59164359	59164682	-	59163898	59164682	A3SS	0.5	50	50	ENSMUST00000191200.7	ENSMUSG00000079550.10	Mpp4	chr1	protein_coding	membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
chr1	59183970	59185501	-	59184009	59185501	A3SS	0.5	50	50	ENSMUST00000191200.7	ENSMUSG00000079550.10	Mpp4	chr1	protein_coding	membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
chr1	59184009	59184325	-	59184009	59185501	A5SS	0.5	50	50	ENSMUST00000191200.7	ENSMUSG00000079550.10	Mpp4	chr1	protein_coding	membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
chr1	59190895	59191194	-	59190895	59196533	A5SS	0.5	50	50	ENSMUST00000191200.7	ENSMUSG00000079550.10	Mpp4	chr1	protein_coding	membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
chr1	59178959;59182871	59182854;59182915	-	59178959;59180120	59180103;59182915	MXE	0.5	100	100	ENSMUST00000078874.14	ENSMUSG00000079550.10	Mpp4	chr1	protein_coding	membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
chr1	59197834	59200631	-	59197834	59200691	A5SS	0.5	50	50	ENSMUST00000078874.14	ENSMUSG00000079550.10	Mpp4	chr1	protein_coding	membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
chr1	59176018	59178921	-	59173434	59178921	A3SS	0.5	50	50	ENSMUST00000066374.14	ENSMUSG00000079550.10	Mpp4	chr1	protein_coding	membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
chr1	59171122	59172974	-	59171122	59173374	A5SS	0.33	50	50	ENSMUST00000066374.14	ENSMUSG00000079550.10	Mpp4	chr1	protein_coding	membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
chr1	59178959	59182915	-	59171122	59182915	A3SS	0.25	50	50	ENSMUST00000186477.2	ENSMUSG00000079550.10	Mpp4	chr1	protein_coding	membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
chr1	59180120	59182915	-	59171122	59182915	A3SS	0.25	50	50	ENSMUST00000186477.2	ENSMUSG00000079550.10	Mpp4	chr1	protein_coding	membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
chr1	59182871	59182915	-	59171122	59182915	A3SS	0.25	50	50	ENSMUST00000186477.2	ENSMUSG00000079550.10	Mpp4	chr1	protein_coding	membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
chr1	59171122	59172974	-	59171122	59182915	A5SS	0.33	50	50	ENSMUST00000186477.2	ENSMUSG00000079550.10	Mpp4	chr1	protein_coding	membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
chr1	59171122	59173374	-	59171122	59182915	A5SS	0.33	50	50	ENSMUST00000186477.2	ENSMUSG00000079550.10	Mpp4	chr1	protein_coding	membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
chr1	59255180	59259534	-	59255180;59257240	59257086;59259534	ES	0.5	50	50	ENSMUST00000027178.13	ENSMUSG00000026024.15	Als2	chr1	protein_coding	alsin Rho guanine nucleotide exchange factor
chr1	59259611	59276007	-	59259611	59276314	A5SS	0.5	50	50	ENSMUST00000027178.13	ENSMUSG00000026024.15	Als2	chr1	protein_coding	alsin Rho guanine nucleotide exchange factor
chr1	59296257	59296975	+	59296263	59296975	A5SS	0.33	50	50	ENSMUST00000160662.8	ENSMUSG00000026023.17	Cdk15	chr1	protein_coding	cyclin-dependent kinase 15
chr1	59296566	59296975	+	59296263	59296975	A5SS	0.33	50	50	ENSMUST00000160662.8	ENSMUSG00000026023.17	Cdk15	chr1	protein_coding	cyclin-dependent kinase 15
chr1	59338213	59340354	+	59328938	59340354	A5SS	0.5	50	50	ENSMUST00000160662.8	ENSMUSG00000026023.17	Cdk15	chr1	protein_coding	cyclin-dependent kinase 15
chr1	59296566	59296975	+	59296257	59296975	A5SS	0.33	50	50	ENSMUST00000114248.3	ENSMUSG00000026023.17	Cdk15	chr1	protein_coding	cyclin-dependent kinase 15
chr1	59350018	59365830	+	59350018	59383407	A3SS	0.5	50	50	ENSMUST00000162906.2	ENSMUSG00000026023.17	Cdk15	chr1	protein_coding	cyclin-dependent kinase 15
chr1	59370157	59383407	+	59350018	59383407	A5SS	0.5	50	50	ENSMUST00000162906.2	ENSMUSG00000026023.17	Cdk15	chr1	protein_coding	cyclin-dependent kinase 15
chr1	59621634;59636235	59636098;59646892	+	59621634	59646892	cassetteExon	0.5	100	100	ENSMUST00000114243.8	ENSMUSG00000047361.17	Gm973	chr1	protein_coding	predicted gene 973
chr1	59597385	59601805	+	59597385	59601802	A3SS	0.5	50	50	ENSMUST00000114243.8	ENSMUSG00000047361.17	Gm973	chr1	protein_coding	predicted gene 973
chr1	59563900	59565870	+	59555677	59565870	A5SS	0.5	50	50	ENSMUST00000114243.8	ENSMUSG00000047361.17	Gm973	chr1	protein_coding	predicted gene 973
chr1	59588245	59589071	+	59583888	59589071	A5SS	0.5	50	50	ENSMUST00000114243.8	ENSMUSG00000047361.17	Gm973	chr1	protein_coding	predicted gene 973
chr1	59597463	59601802	+	59597385	59601802	A5SS	0.5	50	50	ENSMUST00000114243.8	ENSMUSG00000047361.17	Gm973	chr1	protein_coding	predicted gene 973
chr1	59646113	59646892	+	59621634	59646892	A5SS	0.33	50	50	ENSMUST00000114243.8	ENSMUSG00000047361.17	Gm973	chr1	protein_coding	predicted gene 973
chr1	59658604	59664246	+	59646964	59664246	A5SS	0.5	50	50	ENSMUST00000114243.8	ENSMUSG00000047361.17	Gm973	chr1	protein_coding	predicted gene 973
chr1	59583888;59589198	59589071;59595315	+	59583888	59595315	cassetteExon	0.5	100	100	ENSMUST00000185291.2	ENSMUSG00000047361.17	Gm973	chr1	protein_coding	predicted gene 973
chr1	59591721	59595315	+	59583888	59595315	A5SS	0.33	50	50	ENSMUST00000185291.2	ENSMUSG00000047361.17	Gm973	chr1	protein_coding	predicted gene 973
chr1	59589198	59590293	+	59589198	59595315	A3SS	0.5	50	50	ENSMUST00000186310.2	ENSMUSG00000047361.17	Gm973	chr1	protein_coding	predicted gene 973
chr1	59591721	59595315	+	59589198	59595315	A5SS	0.5	50	50	ENSMUST00000186310.2	ENSMUSG00000047361.17	Gm973	chr1	protein_coding	predicted gene 973
chr1	59646113	59646892	+	59636235	59646892	A5SS	0.33	50	50	ENSMUST00000212835.2	ENSMUSG00000047361.17	Gm973	chr1	protein_coding	predicted gene 973
chr1	59664336	59666616	+	59664336	59669154	A3SS	0.5	50	50	ENSMUST00000185753.7	ENSMUSG00000047361.17	Gm973	chr1	protein_coding	predicted gene 973
chr1	59667443	59669154	+	59664336	59669154	A5SS	0.5	50	50	ENSMUST00000185753.7	ENSMUSG00000047361.17	Gm973	chr1	protein_coding	predicted gene 973
chr1	59581708	59588597	-	59581708	59587847	5pMXE	0.5	50	50	ENSMUST00000191318.7	ENSMUSG00000099811.7	Gm28411	chr1	lncRNA	predicted gene 28411
chr1	59581462	59581598	-	59572401	59581598	A3SS	0.5	50	50	ENSMUST00000191318.7	ENSMUSG00000099811.7	Gm28411	chr1	lncRNA	predicted gene 28411
chr1	59681648	59694617	-	59658768	59694617	A3SS	0.33	50	50	ENSMUST00000191158.7	ENSMUSG00000026021.16	Sumo1	chr1	protein_coding	small ubiquitin-like modifier 1
chr1	59683753	59694617	-	59658768	59694617	A3SS	0.33	50	50	ENSMUST00000191158.7	ENSMUSG00000026021.16	Sumo1	chr1	protein_coding	small ubiquitin-like modifier 1
chr1	59681648	59694617	-	59681648;59683753	59683676;59694617	ES	0.5	50	50	ENSMUST00000091374.9	ENSMUSG00000026021.16	Sumo1	chr1	protein_coding	small ubiquitin-like modifier 1
chr1	59681648	59694617	-	59683753	59694617	3pMXE	0.33	50	50	ENSMUST00000123857.2	ENSMUSG00000026021.16	Sumo1	chr1	protein_coding	small ubiquitin-like modifier 1
chr1	59731548	59735137	+	59731548	59731636	3pMXE	0.25	50	50	ENSMUST00000191088.7	ENSMUSG00000026020.10	Nop58	chr1	protein_coding	NOP58 ribonucleoprotein
chr1	59724385;59727778	59727729;59729645	+	59724385	59729645	cassetteExon	0.5	100	100	ENSMUST00000191088.7	ENSMUSG00000026020.10	Nop58	chr1	protein_coding	NOP58 ribonucleoprotein
chr1	59731548	59731711	+	59731548	59731636	A3SS	0.25	50	50	ENSMUST00000191088.7	ENSMUSG00000026020.10	Nop58	chr1	protein_coding	NOP58 ribonucleoprotein
chr1	59731548	59731771	+	59731548	59731636	A3SS	0.25	50	50	ENSMUST00000191088.7	ENSMUSG00000026020.10	Nop58	chr1	protein_coding	NOP58 ribonucleoprotein
chr1	59743909	59745792	+	59743909;59744915	59744752;59745792	ES	0.5	50	50	ENSMUST00000027174.10	ENSMUSG00000026020.10	Nop58	chr1	protein_coding	NOP58 ribonucleoprotein
chr1	59731548;59731887	59731636;59735137	+	59731548	59735137	cassetteExon	0.5	100	100	ENSMUST00000027174.10	ENSMUSG00000026020.10	Nop58	chr1	protein_coding	NOP58 ribonucleoprotein
chr1	59731548;59731887	59731711;59735137	+	59731548	59735137	cassetteExon	0.5	100	100	ENSMUST00000027174.10	ENSMUSG00000026020.10	Nop58	chr1	protein_coding	NOP58 ribonucleoprotein
chr1	59731548;59731887	59731771;59735137	+	59731548	59735137	cassetteExon	0.5	100	100	ENSMUST00000027174.10	ENSMUSG00000026020.10	Nop58	chr1	protein_coding	NOP58 ribonucleoprotein
chr1	59742106;59742383	59742295;59743222	+	59742106	59743222	cassetteExon	0.5	100	100	ENSMUST00000027174.10	ENSMUSG00000026020.10	Nop58	chr1	protein_coding	NOP58 ribonucleoprotein
chr1	59743367	59744887	+	59743367	59743783	A3SS&ES	0.5	50	50	ENSMUST00000027174.10	ENSMUSG00000026020.10	Nop58	chr1	protein_coding	NOP58 ribonucleoprotein
chr1	59744915	59746189	+	59744915	59745792	A3SS&ES	0.5	50	50	ENSMUST00000027174.10	ENSMUSG00000026020.10	Nop58	chr1	protein_coding	NOP58 ribonucleoprotein
chr1	59746223	59748162	+	59746223	59750430	A3SS	0.5	50	50	ENSMUST00000027174.10	ENSMUSG00000026020.10	Nop58	chr1	protein_coding	NOP58 ribonucleoprotein
chr1	59749811	59750430	+	59746223	59750430	A5SS	0.5	50	50	ENSMUST00000027174.10	ENSMUSG00000026020.10	Nop58	chr1	protein_coding	NOP58 ribonucleoprotein
chr1	59731548	59731711	+	59731548	59731771	A3SS	0.25	50	50	ENSMUST00000190231.7	ENSMUSG00000026020.10	Nop58	chr1	protein_coding	NOP58 ribonucleoprotein
chr1	59731548	59735137	+	59731887	59735137	5pMXE	0.5	50	50	ENSMUST00000185368.2	ENSMUSG00000026020.10	Nop58	chr1	protein_coding	NOP58 ribonucleoprotein
chr1	59743367;59744915	59744887;59745792	+	59743367;59743909	59743783;59745792	MXE	0.5	100	100	ENSMUST00000190265.7	ENSMUSG00000026020.10	Nop58	chr1	protein_coding	NOP58 ribonucleoprotein
chr1	59743909	59745792	+	59743909	59744752	A3SS&ES	0.5	50	50	ENSMUST00000187837.7	ENSMUSG00000026020.10	Nop58	chr1	protein_coding	NOP58 ribonucleoprotein
chr1	60014162;60018594	60018437;60020568	+	60014162	60020568	cassetteExon	0.5	100	100	ENSMUST00000036540.12	ENSMUSG00000041040.13	Fam117b	chr1	protein_coding	family with sequence similarity 117, member B
chr1	60035187	60036610	-	60030398	60036610	A3SS	0.5	50	50	ENSMUST00000027172.13	ENSMUSG00000026018.13	Ica1l	chr1	protein_coding	islet cell autoantigen 1-like
chr1	60060543	60061737	-	60054994	60061737	A3SS	0.5	50	50	ENSMUST00000027172.13	ENSMUSG00000026018.13	Ica1l	chr1	protein_coding	islet cell autoantigen 1-like
chr1	60067395	60082229	-	60067395	60081956	A5SS	0.5	50	50	ENSMUST00000027172.13	ENSMUSG00000026018.13	Ica1l	chr1	protein_coding	islet cell autoantigen 1-like
chr1	60067395	60082229	-	60067405	60082229	A3SS	0.5	50	50	ENSMUST00000191251.7	ENSMUSG00000026018.13	Ica1l	chr1	protein_coding	islet cell autoantigen 1-like
chr1	60136886	60137149	-	60136886	60137204	A5SS	0.33	50	50	ENSMUST00000122038.8	ENSMUSG00000026019.16	Wdr12	chr1	protein_coding	WD repeat domain 12
chr1	60136886	60137302	-	60136886	60137204	A5SS	0.33	50	50	ENSMUST00000122038.8	ENSMUSG00000026019.16	Wdr12	chr1	protein_coding	WD repeat domain 12
chr1	60136886	60137149	-	60136886	60137302	A5SS	0.33	50	50	ENSMUST00000117438.8	ENSMUSG00000026019.16	Wdr12	chr1	protein_coding	WD repeat domain 12
chr1	60136826	60137149	-	60136886	60137149	A3SS	0.5	50	50	ENSMUST00000143342.8	ENSMUSG00000026019.16	Wdr12	chr1	protein_coding	WD repeat domain 12
chr1	60137466	60144470	+	60137466;60141943	60141786;60144470	ES	0.5	50	50	ENSMUST00000130075.8	ENSMUSG00000026017.14	Carf	chr1	protein_coding	calcium response factor
chr1	60144593	60148486	+	60144593;60147359	60147242;60148486	ES	0.5	50	50	ENSMUST00000130075.8	ENSMUSG00000026017.14	Carf	chr1	protein_coding	calcium response factor
chr1	60164070	60165079	+	60164070;60164304	60164238;60165079	ES	0.5	50	50	ENSMUST00000130075.8	ENSMUSG00000026017.14	Carf	chr1	protein_coding	calcium response factor
chr1	60180727	60185268	+	60180727;60183315	60183153;60185268	ES	0.5	50	50	ENSMUST00000130075.8	ENSMUSG00000026017.14	Carf	chr1	protein_coding	calcium response factor
chr1	60147359	60148381	+	60147359	60148486	A3SS	0.5	50	50	ENSMUST00000130075.8	ENSMUSG00000026017.14	Carf	chr1	protein_coding	calcium response factor
chr1	60144586	60147242	+	60144593	60147242	A5SS	0.5	50	50	ENSMUST00000130075.8	ENSMUSG00000026017.14	Carf	chr1	protein_coding	calcium response factor
chr1	60144593	60148486	+	60147359	60148486	5pMXE	0.5	50	50	ENSMUST00000027171.12	ENSMUSG00000026017.14	Carf	chr1	protein_coding	calcium response factor
chr1	60171192	60175423	+	60171192	60180494	A3SS	0.5	50	50	ENSMUST00000186107.7	ENSMUSG00000026017.14	Carf	chr1	protein_coding	calcium response factor
chr1	60178502	60180494	+	60171192	60180494	A5SS	0.5	50	50	ENSMUST00000186107.7	ENSMUSG00000026017.14	Carf	chr1	protein_coding	calcium response factor
chr1	60318959	60320984	+	60318959;60320501	60320406;60320984	ES	0.5	50	50	ENSMUST00000160834.8	ENSMUSG00000073664.12	Nbeal1	chr1	protein_coding	neurobeachin like 1
chr1	60263890;60267867	60267781;60269761	+	60263890	60269761	cassetteExon	0.5	100	100	ENSMUST00000160834.8	ENSMUSG00000073664.12	Nbeal1	chr1	protein_coding	neurobeachin like 1
chr1	60318959	60319190	+	60318959	60320406	A3SS	0.33	50	50	ENSMUST00000160834.8	ENSMUSG00000073664.12	Nbeal1	chr1	protein_coding	neurobeachin like 1
chr1	60320178	60320406	+	60318959	60320406	A5SS	0.5	50	50	ENSMUST00000160834.8	ENSMUSG00000073664.12	Nbeal1	chr1	protein_coding	neurobeachin like 1
chr1	60332123	60335038	+	60332123	60349363	A3SS	0.5	50	50	ENSMUST00000035569.12	ENSMUSG00000073664.12	Nbeal1	chr1	protein_coding	neurobeachin like 1
chr1	60344523	60349363	+	60332123	60349363	A5SS	0.5	50	50	ENSMUST00000035569.12	ENSMUSG00000073664.12	Nbeal1	chr1	protein_coding	neurobeachin like 1
chr1	60318959	60319190	+	60318959	60320984	A3SS	0.33	50	50	ENSMUST00000159344.2	ENSMUSG00000073664.12	Nbeal1	chr1	protein_coding	neurobeachin like 1
chr1	60391329	60393673	+	60391329;60392234	60392068;60393673	ES	0.5	50	50	ENSMUST00000114202.8	ENSMUSG00000049439.14	Cyp20a1	chr1	protein_coding	cytochrome P450, family 20, subfamily a, polypeptide 1
chr1	60449078	60476215	+	60449078;60473569	60473402;60476215	ES	0.5	50	50	ENSMUST00000052332.15	ENSMUSG00000026782.16	Abi2	chr1	protein_coding	abl interactor 2
chr1	60483241	60487237	+	60483241;60486565	60486419;60487237	ES	0.5	50	50	ENSMUST00000052332.15	ENSMUSG00000026782.16	Abi2	chr1	protein_coding	abl interactor 2
chr1	60476391;60478118	60478101;60483144	+	60476391	60483144	cassetteExon	0.5	100	100	ENSMUST00000052332.15	ENSMUSG00000026782.16	Abi2	chr1	protein_coding	abl interactor 2
chr1	60487361;60489412	60489230;60492763	+	60487361	60492763	cassetteExon	0.5	100	100	ENSMUST00000052332.15	ENSMUSG00000026782.16	Abi2	chr1	protein_coding	abl interactor 2
chr1	60487361;60489412	60489329;60492763	+	60487361	60492763	cassetteExon	0.5	100	100	ENSMUST00000052332.15	ENSMUSG00000026782.16	Abi2	chr1	protein_coding	abl interactor 2
chr1	60492921;60503774	60503688;60509825	+	60492921	60509825	cassetteExon	0.5	100	100	ENSMUST00000052332.15	ENSMUSG00000026782.16	Abi2	chr1	protein_coding	abl interactor 2
chr1	60487361	60489329	+	60487361	60489230	A3SS	0.33	50	50	ENSMUST00000188594.7	ENSMUSG00000026782.16	Abi2	chr1	protein_coding	abl interactor 2
chr1	60476391	60483144	+	60478118	60483144	A5SS	0.5	50	50	ENSMUST00000191493.2	ENSMUSG00000026782.16	Abi2	chr1	protein_coding	abl interactor 2
chr1	60483241	60487237	+	60483241	60486419	3pMXE	0.5	50	50	ENSMUST00000189082.7	ENSMUSG00000026782.16	Abi2	chr1	protein_coding	abl interactor 2
chr1	60503774	60509831	+	60503774	60509825	A3SS	0.5	50	50	ENSMUST00000187709.7	ENSMUSG00000026782.16	Abi2	chr1	protein_coding	abl interactor 2
chr1	60449078	60476215	+	60449078	60473402	3pMXE	0.5	50	50	ENSMUST00000189649.2	ENSMUSG00000026782.16	Abi2	chr1	protein_coding	abl interactor 2
chr1	60492921	60509825	+	60492921	60503688	A3SS&ES	0.5	50	50	ENSMUST00000190158.2	ENSMUSG00000026782.16	Abi2	chr1	protein_coding	abl interactor 2
chr1	60572565	60606213	-	60572565	60605724	5pMXE	0.5	50	50	ENSMUST00000140485.8	ENSMUSG00000026014.16	Raph1	chr1	protein_coding	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
chr1	60522499	60532697	-	60529480	60532697	A3SS	0.33	50	50	ENSMUST00000140485.8	ENSMUSG00000026014.16	Raph1	chr1	protein_coding	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
chr1	60530103	60532697	-	60529480	60532697	A3SS	0.33	50	50	ENSMUST00000140485.8	ENSMUSG00000026014.16	Raph1	chr1	protein_coding	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
chr1	60558219	60564751	-	60542754	60564751	A3SS	0.5	50	50	ENSMUST00000140485.8	ENSMUSG00000026014.16	Raph1	chr1	protein_coding	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
chr1	60542754	60549576	-	60542754	60564751	A5SS	0.5	50	50	ENSMUST00000140485.8	ENSMUSG00000026014.16	Raph1	chr1	protein_coding	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
chr1	60530103	60532697	-	60522499	60532697	A3SS	0.33	50	50	ENSMUST00000182085.8	ENSMUSG00000026014.16	Raph1	chr1	protein_coding	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
chr1	60785687	60802138	+	60759736	60802138	A5SS	0.5	50	50	ENSMUST00000132833.2	ENSMUSG00000026012.3	Cd28	chr1	protein_coding	CD28 antigen
chr1	60948438	60951582	+	60939780	60951582	A5SS	0.5	50	50	ENSMUST00000124816.2	ENSMUSG00000026011.14	Ctla4	chr1	protein_coding	cytotoxic T-lymphocyte-associated protein 4
chr1	60951929	60953772	+	60951929;60952487	60952378;60953772	ES	0.5	50	50	ENSMUST00000027164.9	ENSMUSG00000026011.14	Ctla4	chr1	protein_coding	cytotoxic T-lymphocyte-associated protein 4
chr1	62115653	62184006	+	62115653	62117285	3pMXE	0.5	50	50	ENSMUST00000138768.8	ENSMUSG00000052062.15	Pard3b	chr1	protein_coding	par-3 family cell polarity regulator beta
chr1	62205641	62250693	+	62205641;62237921	62237736;62250693	ES	0.5	50	50	ENSMUST00000075374.10	ENSMUSG00000052062.15	Pard3b	chr1	protein_coding	par-3 family cell polarity regulator beta
chr1	62479280	62571804	+	62479280;62518954	62518658;62571804	ES	0.5	50	50	ENSMUST00000075374.10	ENSMUSG00000052062.15	Pard3b	chr1	protein_coding	par-3 family cell polarity regulator beta
chr1	62825460;62851743	62851693;62854492	+	62825460	62854492	cassetteExon	0.5	100	100	ENSMUST00000102822.9	ENSMUSG00000025969.16	Nrp2	chr1	protein_coding	neuropilin 2
chr1	62825460	62834868	+	62825460	62854492	A3SS	0.33	50	50	ENSMUST00000102822.9	ENSMUSG00000025969.16	Nrp2	chr1	protein_coding	neuropilin 2
chr1	62825475	62854492	+	62825460	62854492	A5SS	0.33	50	50	ENSMUST00000102822.9	ENSMUSG00000025969.16	Nrp2	chr1	protein_coding	neuropilin 2
chr1	62825475;62851743	62851693;62854492	+	62825475	62854492	cassetteExon	0.5	100	100	ENSMUST00000075144.12	ENSMUSG00000025969.16	Nrp2	chr1	protein_coding	neuropilin 2
chr1	62825475	62834868	+	62825475	62854492	A3SS	0.33	50	50	ENSMUST00000075144.12	ENSMUSG00000025969.16	Nrp2	chr1	protein_coding	neuropilin 2
chr1	62825475	62851693	+	62825475	62834868	3pMXE	0.33	50	50	ENSMUST00000027112.13	ENSMUSG00000025969.16	Nrp2	chr1	protein_coding	neuropilin 2
chr1	62825460	62834868	+	62825475	62834868	A5SS	0.5	50	50	ENSMUST00000027112.13	ENSMUSG00000025969.16	Nrp2	chr1	protein_coding	neuropilin 2
chr1	62825460	62851693	+	62825460	62834868	3pMXE	0.33	50	50	ENSMUST00000114155.8	ENSMUSG00000025969.16	Nrp2	chr1	protein_coding	neuropilin 2
chr1	62825475	62851693	+	62825460	62851693	A5SS	0.5	50	50	ENSMUST00000063594.13	ENSMUSG00000025969.16	Nrp2	chr1	protein_coding	neuropilin 2
chr1	62825475	62854492	+	62851743	62854492	A5SS&ES	0.33	50	50	ENSMUST00000063594.13	ENSMUSG00000025969.16	Nrp2	chr1	protein_coding	neuropilin 2
chr1	62825460	62854492	+	62851743	62854492	A5SS&ES	0.33	50	50	ENSMUST00000114157.3	ENSMUSG00000025969.16	Nrp2	chr1	protein_coding	neuropilin 2
chr1	63125557	63132444	-	63125557	63130950	5pMXE	0.5	50	50	ENSMUST00000133236.8	ENSMUSG00000040865.16	Ino80d	chr1	protein_coding	INO80 complex subunit D
chr1	63132599	63132799	-	63132690	63132799	A3SS	0.5	50	50	ENSMUST00000165066.8	ENSMUSG00000040865.16	Ino80d	chr1	protein_coding	INO80 complex subunit D
chr1	63132889	63144815	-	63132889	63153520	A5SS	0.5	50	50	ENSMUST00000097718.9	ENSMUSG00000040865.16	Ino80d	chr1	protein_coding	INO80 complex subunit D
chr1	63154119	63183278	+	63153703	63183278	A5SS	0.5	50	50	ENSMUST00000138611.8	ENSMUSG00000084799.8	Ino80dos	chr1	lncRNA	INO80 complex subunit D, opposite strand
chr1	63183081;63185728	63185645;63186279	-	63183081	63186279	cassetteExon	0.5	100	100	ENSMUST00000027111.15	ENSMUSG00000025968.17	Ndufs1	chr1	protein_coding	NADH:ubiquinone oxidoreductase core subunit S1
chr1	63210073;63211416	63211313;63215745	-	63210073	63215745	cassetteExon	0.5	100	100	ENSMUST00000027111.15	ENSMUSG00000025968.17	Ndufs1	chr1	protein_coding	NADH:ubiquinone oxidoreductase core subunit S1
chr1	63195491	63215634	-	63195491	63196291	A5SS&ES	0.5	50	50	ENSMUST00000027111.15	ENSMUSG00000025968.17	Ndufs1	chr1	protein_coding	NADH:ubiquinone oxidoreductase core subunit S1
chr1	63210073	63214796	-	63210073	63215745	A5SS	0.25	50	50	ENSMUST00000027111.15	ENSMUSG00000025968.17	Ndufs1	chr1	protein_coding	NADH:ubiquinone oxidoreductase core subunit S1
chr1	63210073	63215587	-	63210073	63215745	A5SS	0.25	50	50	ENSMUST00000027111.15	ENSMUSG00000025968.17	Ndufs1	chr1	protein_coding	NADH:ubiquinone oxidoreductase core subunit S1
chr1	63210073;63211416	63211313;63215587	-	63210073	63215587	cassetteExon	0.5	100	100	ENSMUST00000168099.9	ENSMUSG00000025968.17	Ndufs1	chr1	protein_coding	NADH:ubiquinone oxidoreductase core subunit S1
chr1	63210073;63214847	63214796;63215587	-	63210073	63215587	cassetteExon	0.5	100	100	ENSMUST00000168099.9	ENSMUSG00000025968.17	Ndufs1	chr1	protein_coding	NADH:ubiquinone oxidoreductase core subunit S1
chr1	63210073	63214796	-	63210073	63211313	A5SS&ES	0.25	50	50	ENSMUST00000185827.7	ENSMUSG00000025968.17	Ndufs1	chr1	protein_coding	NADH:ubiquinone oxidoreductase core subunit S1
chr1	63210073	63215587	-	63210073	63211313	A5SS&ES	0.25	50	50	ENSMUST00000185827.7	ENSMUSG00000025968.17	Ndufs1	chr1	protein_coding	NADH:ubiquinone oxidoreductase core subunit S1
chr1	63211416	63215587	-	63211416	63215745	A5SS	0.5	50	50	ENSMUST00000185827.7	ENSMUSG00000025968.17	Ndufs1	chr1	protein_coding	NADH:ubiquinone oxidoreductase core subunit S1
chr1	63205526	63208388	-	63204019	63208388	A3SS	0.5	50	50	ENSMUST00000188370.7	ENSMUSG00000025968.17	Ndufs1	chr1	protein_coding	NADH:ubiquinone oxidoreductase core subunit S1
chr1	63204019	63204108	-	63204019	63208388	A5SS	0.5	50	50	ENSMUST00000188370.7	ENSMUSG00000025968.17	Ndufs1	chr1	protein_coding	NADH:ubiquinone oxidoreductase core subunit S1
chr1	63210073;63211416	63211313;63215587	-	63210073;63214847	63214796;63215587	MXE	0.5	100	100	ENSMUST00000185732.7	ENSMUSG00000025968.17	Ndufs1	chr1	protein_coding	NADH:ubiquinone oxidoreductase core subunit S1
chr1	63210073	63215745	-	63210073	63211313	A5SS&ES	0.25	50	50	ENSMUST00000189664.2	ENSMUSG00000025968.17	Ndufs1	chr1	protein_coding	NADH:ubiquinone oxidoreductase core subunit S1
chr1	63216450	63217598	+	63216450;63217035	63216913;63217598	ES	0.33	50	50	ENSMUST00000129339.8	ENSMUSG00000025967.17	Eef1b2	chr1	protein_coding	eukaryotic translation elongation factor 1 beta 2
chr1	63217035;63217423	63217182;63217598	+	63217035	63217598	cassetteExon	0.5	100	100	ENSMUST00000129339.8	ENSMUSG00000025967.17	Eef1b2	chr1	protein_coding	eukaryotic translation elongation factor 1 beta 2
chr1	63217035;63217423	63217187;63217598	+	63217035	63217598	cassetteExon	0.5	100	100	ENSMUST00000129339.8	ENSMUSG00000025967.17	Eef1b2	chr1	protein_coding	eukaryotic translation elongation factor 1 beta 2
chr1	63216450	63216882	+	63216450	63216913	A3SS	0.25	50	50	ENSMUST00000129339.8	ENSMUSG00000025967.17	Eef1b2	chr1	protein_coding	eukaryotic translation elongation factor 1 beta 2
chr1	63216450	63217026	+	63216450	63216913	A3SS	0.25	50	50	ENSMUST00000129339.8	ENSMUSG00000025967.17	Eef1b2	chr1	protein_coding	eukaryotic translation elongation factor 1 beta 2
chr1	63217035	63217582	+	63217035	63217598	A3SS	0.25	50	50	ENSMUST00000129339.8	ENSMUSG00000025967.17	Eef1b2	chr1	protein_coding	eukaryotic translation elongation factor 1 beta 2
chr1	63216450	63217598	+	63216450;63217035	63217026;63217598	ES	0.33	50	50	ENSMUST00000142062.8	ENSMUSG00000025967.17	Eef1b2	chr1	protein_coding	eukaryotic translation elongation factor 1 beta 2
chr1	63216450	63216882	+	63216450	63217026	A3SS	0.25	50	50	ENSMUST00000142062.8	ENSMUSG00000025967.17	Eef1b2	chr1	protein_coding	eukaryotic translation elongation factor 1 beta 2
chr1	63216450;63217035	63216882;63217598	+	63216450	63217598	cassetteExon	0.5	100	100	ENSMUST00000188524.2	ENSMUSG00000025967.17	Eef1b2	chr1	protein_coding	eukaryotic translation elongation factor 1 beta 2
chr1	63216450;63217423	63217026;63217598	+	63216450	63217598	cassetteExon	0.5	100	100	ENSMUST00000188524.2	ENSMUSG00000025967.17	Eef1b2	chr1	protein_coding	eukaryotic translation elongation factor 1 beta 2
chr1	63216409	63216882	+	63216450	63216882	A5SS	0.5	50	50	ENSMUST00000148553.2	ENSMUSG00000025967.17	Eef1b2	chr1	protein_coding	eukaryotic translation elongation factor 1 beta 2
chr1	63216450	63217598	+	63217035	63217598	A5SS&ES	0.33	50	50	ENSMUST00000135877.8	ENSMUSG00000025967.17	Eef1b2	chr1	protein_coding	eukaryotic translation elongation factor 1 beta 2
chr1	63216450	63217598	+	63216450	63216882	A3SS&ES	0.25	50	50	ENSMUST00000027108.13	ENSMUSG00000025967.17	Eef1b2	chr1	protein_coding	eukaryotic translation elongation factor 1 beta 2
chr1	63217035	63217182	+	63217035	63217582	A3SS	0.25	50	50	ENSMUST00000027108.13	ENSMUSG00000025967.17	Eef1b2	chr1	protein_coding	eukaryotic translation elongation factor 1 beta 2
chr1	63217035	63217187	+	63217035	63217582	A3SS	0.25	50	50	ENSMUST00000027108.13	ENSMUSG00000025967.17	Eef1b2	chr1	protein_coding	eukaryotic translation elongation factor 1 beta 2
chr1	63216450	63217598	+	63216450	63216913	3pMXE	0.25	50	50	ENSMUST00000126469.2	ENSMUSG00000025967.17	Eef1b2	chr1	protein_coding	eukaryotic translation elongation factor 1 beta 2
chr1	63217035	63217182	+	63217035	63217187	A3SS	0.25	50	50	ENSMUST00000174890.9	ENSMUSG00000025967.17	Eef1b2	chr1	protein_coding	eukaryotic translation elongation factor 1 beta 2
chr1	63217035	63217598	+	63217035	63217182	A3SS	0.25	50	50	ENSMUST00000126795.3	ENSMUSG00000025967.17	Eef1b2	chr1	protein_coding	eukaryotic translation elongation factor 1 beta 2
chr1	63249058;63250873	63250743;63253323	-	63249058	63253323	cassetteExon	0.5	100	100	ENSMUST00000050536.14	ENSMUSG00000046856.14	Gpr1	chr1	protein_coding	G protein-coupled receptor 1
chr1	63248325	63248913	-	63223263	63248913	A3SS	0.5	50	50	ENSMUST00000050536.14	ENSMUSG00000046856.14	Gpr1	chr1	protein_coding	G protein-coupled receptor 1
chr1	63239962	63246674	+	63239833	63246674	A5SS	0.5	50	50	ENSMUST00000141027.2	ENSMUSG00000086730.3	Platr12	chr1	lncRNA	pluripotency associated transcript 12
chr1	63310187	63312042	-	63310187	63310407	A5SS&ES	0.5	50	50	ENSMUST00000153049.8	ENSMUSG00000087561.8	Gm11608	chr1	lncRNA	predicted gene 11608
chr1	63312631	63317090	+	63312631;63314337	63314255;63317090	ES	0.5	50	50	ENSMUST00000239483.2	ENSMUSG00000027520.17	Zdbf2	chr1	protein_coding	zinc finger, DBF-type containing 2
chr1	63320036;63329941	63329806;63334075	+	63320036	63334075	cassetteExon	0.5	100	100	ENSMUST00000239483.2	ENSMUSG00000027520.17	Zdbf2	chr1	protein_coding	zinc finger, DBF-type containing 2
chr1	63320036;63329941	63329836;63334075	+	63320036	63334075	cassetteExon	0.5	100	100	ENSMUST00000239483.2	ENSMUSG00000027520.17	Zdbf2	chr1	protein_coding	zinc finger, DBF-type containing 2
chr1	63320036	63329806	+	63320036	63329836	A3SS	0.33	50	50	ENSMUST00000114132.8	ENSMUSG00000027520.17	Zdbf2	chr1	protein_coding	zinc finger, DBF-type containing 2
chr1	63320036	63334075	+	63329941	63334075	5pMXE	0.5	50	50	ENSMUST00000029025.9	ENSMUSG00000027520.17	Zdbf2	chr1	protein_coding	zinc finger, DBF-type containing 2
chr1	63509816	63516838	+	63487107	63516838	A5SS	0.5	50	50	ENSMUST00000182642.8	ENSMUSG00000025964.16	Adam23	chr1	protein_coding	a disintegrin and metallopeptidase domain 23
chr1	63533447	63554736	+	63516914	63554736	A5SS	0.5	50	50	ENSMUST00000182642.8	ENSMUSG00000025964.16	Adam23	chr1	protein_coding	a disintegrin and metallopeptidase domain 23
chr1	63612157	63631767	+	63612157;63624614	63624524;63631767	ES	0.33	50	50	ENSMUST00000087374.10	ENSMUSG00000025964.16	Adam23	chr1	protein_coding	a disintegrin and metallopeptidase domain 23
chr1	63612157;63620386	63620296;63631767	+	63612157;63624614	63624524;63631767	MXE	0.5	100	100	ENSMUST00000087374.10	ENSMUSG00000025964.16	Adam23	chr1	protein_coding	a disintegrin and metallopeptidase domain 23
chr1	63612157;63620386	63620296;63631767	+	63612157	63631767	cassetteExon	0.5	100	100	ENSMUST00000114103.8	ENSMUSG00000025964.16	Adam23	chr1	protein_coding	a disintegrin and metallopeptidase domain 23
chr1	63612157	63631767	+	63624614	63631767	5pMXE	0.33	50	50	ENSMUST00000141545.3	ENSMUSG00000025964.16	Adam23	chr1	protein_coding	a disintegrin and metallopeptidase domain 23
chr1	63620386	63631767	+	63624614	63631767	5pMXE	0.33	50	50	ENSMUST00000141545.3	ENSMUSG00000025964.16	Adam23	chr1	protein_coding	a disintegrin and metallopeptidase domain 23
chr1	64160298	64161361	-	64160298	64160545	5pMXE	0.5	50	50	ENSMUST00000055001.10	ENSMUSG00000025959.14	Klf7	chr1	protein_coding	Kruppel-like factor 7 (ubiquitous)
chr1	64597808;64598927	64598886;64605376	+	64597808	64605376	cassetteExon	0.5	100	100	ENSMUST00000185594.7	ENSMUSG00000025958.15	Creb1	chr1	protein_coding	cAMP responsive element binding protein 1
chr1	64597808;64601024	64600912;64605376	+	64597808	64605376	cassetteExon	0.5	100	100	ENSMUST00000185594.7	ENSMUSG00000025958.15	Creb1	chr1	protein_coding	cAMP responsive element binding protein 1
chr1	64613414;64614418	64614355;64615338	+	64613414	64615338	cassetteExon	0.5	100	100	ENSMUST00000185594.7	ENSMUSG00000025958.15	Creb1	chr1	protein_coding	cAMP responsive element binding protein 1
chr1	64613414	64613870	+	64613414	64615338	A3SS	0.33	50	50	ENSMUST00000185594.7	ENSMUSG00000025958.15	Creb1	chr1	protein_coding	cAMP responsive element binding protein 1
chr1	64615488	64617180	+	64615488	64636393	A3SS	0.5	50	50	ENSMUST00000185594.7	ENSMUSG00000025958.15	Creb1	chr1	protein_coding	cAMP responsive element binding protein 1
chr1	64572179	64590008	+	64572063	64590008	A5SS	0.5	50	50	ENSMUST00000185594.7	ENSMUSG00000025958.15	Creb1	chr1	protein_coding	cAMP responsive element binding protein 1
chr1	64572179	64597662	+	64590129	64597662	A5SS&ES	0.5	50	50	ENSMUST00000185594.7	ENSMUSG00000025958.15	Creb1	chr1	protein_coding	cAMP responsive element binding protein 1
chr1	64572179;64590129	64590008;64597662	+	64572179	64597662	cassetteExon	0.5	100	100	ENSMUST00000171164.8	ENSMUSG00000025958.15	Creb1	chr1	protein_coding	cAMP responsive element binding protein 1
chr1	64597808;64601024	64600912;64605376	+	64597808;64598927	64598886;64605376	MXE	0.5	100	100	ENSMUST00000049932.12	ENSMUSG00000025958.15	Creb1	chr1	protein_coding	cAMP responsive element binding protein 1
chr1	64613414	64614355	+	64613414	64613870	3pMXE	0.33	50	50	ENSMUST00000186335.7	ENSMUSG00000025958.15	Creb1	chr1	protein_coding	cAMP responsive element binding protein 1
chr1	64653427	64654257	-	64647296	64654257	A3SS	0.5	50	50	ENSMUST00000114079.9	ENSMUSG00000025956.11	Mettl21a	chr1	protein_coding	methyltransferase like 21A
chr1	64654368	64654598	-	64654368	64655432	A5SS	0.5	50	50	ENSMUST00000114079.9	ENSMUSG00000025956.11	Mettl21a	chr1	protein_coding	methyltransferase like 21A
chr1	64728083	64729623	-	64719544	64729623	A3SS	0.5	50	50	ENSMUST00000150749.2	ENSMUSG00000087213.3	2810408I11Rik	chr1	lncRNA	RIKEN cDNA 2810408I11 gene
chr1	64730125	64730372	+	64729835	64730372	A5SS	0.5	50	50	ENSMUST00000114077.8	ENSMUSG00000070871.11	Ccnyl1	chr1	protein_coding	cyclin Y-like 1
chr1	64776012	64776399	-	64776012	64776292	A5SS	0.5	50	50	ENSMUST00000063982.7	ENSMUSG00000045005.10	Fzd5	chr1	protein_coding	frizzled class receptor 5
chr1	64992946	64995854	-	64977698	64995854	A3SS	0.5	50	50	ENSMUST00000139649.8	ENSMUSG00000051344.14	Plekhm3	chr1	protein_coding	pleckstrin homology domain containing, family M, member 3
chr1	64859252	64875829	-	64859252	64900346	A5SS	0.5	50	50	ENSMUST00000139649.8	ENSMUSG00000051344.14	Plekhm3	chr1	protein_coding	pleckstrin homology domain containing, family M, member 3
chr1	64961641	64967192	-	64961641	64976856	A5SS	0.5	50	50	ENSMUST00000139649.8	ENSMUSG00000051344.14	Plekhm3	chr1	protein_coding	pleckstrin homology domain containing, family M, member 3
chr1	64977698	64995774	-	64977698	64995854	A5SS	0.5	50	50	ENSMUST00000139649.8	ENSMUSG00000051344.14	Plekhm3	chr1	protein_coding	pleckstrin homology domain containing, family M, member 3
chr1	65064889;65069847	65069727;65071745	-	65064889	65071745	cassetteExon	0.5	100	100	ENSMUST00000162800.8	ENSMUSG00000025955.14	Akr1cl	chr1	protein_coding	aldo-keto reductase family 1, member C-like
chr1	65061151	65063822	-	65061155	65063822	A3SS	0.5	50	50	ENSMUST00000162800.8	ENSMUSG00000025955.14	Akr1cl	chr1	protein_coding	aldo-keto reductase family 1, member C-like
chr1	65055391	65055834	-	65055391	65055824	A5SS	0.5	50	50	ENSMUST00000162800.8	ENSMUSG00000025955.14	Akr1cl	chr1	protein_coding	aldo-keto reductase family 1, member C-like
chr1	65067732	65069727	-	65064889	65069727	A3SS	0.5	50	50	ENSMUST00000069142.12	ENSMUSG00000025955.14	Akr1cl	chr1	protein_coding	aldo-keto reductase family 1, member C-like
chr1	65064889	65071745	-	65069847	65071745	3pMXE	0.5	50	50	ENSMUST00000160283.2	ENSMUSG00000025955.14	Akr1cl	chr1	protein_coding	aldo-keto reductase family 1, member C-like
chr1	65101590	65102218	-	65101341	65102218	A3SS	0.5	50	50	ENSMUST00000045028.15	ENSMUSG00000067299.12	Crygd	chr1	protein_coding	crystallin, gamma D
chr1	65111033	65112321	-	65111030	65112321	A3SS	0.5	50	50	ENSMUST00000027089.15	ENSMUSG00000025952.16	Crygc	chr1	protein_coding	crystallin, gamma C
chr1	65142382	65148621	-	65142382	65142488	5pMXE	0.5	50	50	ENSMUST00000061497.9	ENSMUSG00000044429.9	Cryga	chr1	protein_coding	crystallin, gamma A
chr1	65156368	65160516	-	65156368	65158698	5pMXE	0.5	50	50	ENSMUST00000144760.3	ENSMUSG00000100846.2	Gm28845	chr1	protein_coding	predicted gene 28845
chr1	65144909	65148621	-	65142382	65148621	A3SS	0.33	50	50	ENSMUST00000144760.3	ENSMUSG00000100846.2	Gm28845	chr1	protein_coding	predicted gene 28845
chr1	65147964	65148621	-	65142382	65148621	A3SS	0.33	50	50	ENSMUST00000144760.3	ENSMUSG00000100846.2	Gm28845	chr1	protein_coding	predicted gene 28845
chr1	65156368	65160516	-	65156368;65158780	65158698;65160516	ES	0.5	50	50	ENSMUST00000148020.8	ENSMUSG00000044816.11	D630023F18Rik	chr1	protein_coding	RIKEN cDNA D630023F18 gene
chr1	65147964	65148621	-	65144909	65148621	A3SS	0.33	50	50	ENSMUST00000148020.8	ENSMUSG00000044816.11	D630023F18Rik	chr1	protein_coding	RIKEN cDNA D630023F18 gene
chr1	65158780	65160498	-	65158780	65160516	A5SS	0.5	50	50	ENSMUST00000148020.8	ENSMUSG00000044816.11	D630023F18Rik	chr1	protein_coding	RIKEN cDNA D630023F18 gene
chr1	65214527	65218922	-	65214527	65218149	5pMXE	0.2	50	50	ENSMUST00000097709.11	ENSMUSG00000025950.17	Idh1	chr1	protein_coding	isocitrate dehydrogenase 1 (NADP+), soluble
chr1	65214527	65220787	-	65214527	65218149	5pMXE	0.2	50	50	ENSMUST00000097709.11	ENSMUSG00000025950.17	Idh1	chr1	protein_coding	isocitrate dehydrogenase 1 (NADP+), soluble
chr1	65214527	65225464	-	65214527	65218149	5pMXE	0.2	50	50	ENSMUST00000097709.11	ENSMUSG00000025950.17	Idh1	chr1	protein_coding	isocitrate dehydrogenase 1 (NADP+), soluble
chr1	65214527	65214671	-	65214527	65218149	A5SS	0.2	50	50	ENSMUST00000097709.11	ENSMUSG00000025950.17	Idh1	chr1	protein_coding	isocitrate dehydrogenase 1 (NADP+), soluble
chr1	65214527;65220857	65220787;65225464	-	65214527	65225464	cassetteExon	0.5	100	100	ENSMUST00000169032.8	ENSMUSG00000025950.17	Idh1	chr1	protein_coding	isocitrate dehydrogenase 1 (NADP+), soluble
chr1	65214527	65214671	-	65214527	65225464	A5SS	0.2	50	50	ENSMUST00000169032.8	ENSMUSG00000025950.17	Idh1	chr1	protein_coding	isocitrate dehydrogenase 1 (NADP+), soluble
chr1	65214527	65218922	-	65214527	65225464	A5SS	0.2	50	50	ENSMUST00000169032.8	ENSMUSG00000025950.17	Idh1	chr1	protein_coding	isocitrate dehydrogenase 1 (NADP+), soluble
chr1	65214527;65218974	65218922;65220787	-	65214527	65220787	cassetteExon	0.5	100	100	ENSMUST00000188876.7	ENSMUSG00000025950.17	Idh1	chr1	protein_coding	isocitrate dehydrogenase 1 (NADP+), soluble
chr1	65214527	65214671	-	65214527	65220787	A5SS	0.2	50	50	ENSMUST00000188876.7	ENSMUSG00000025950.17	Idh1	chr1	protein_coding	isocitrate dehydrogenase 1 (NADP+), soluble
chr1	65214527	65218922	-	65214527	65214671	5pMXE	0.2	50	50	ENSMUST00000149310.8	ENSMUSG00000025950.17	Idh1	chr1	protein_coding	isocitrate dehydrogenase 1 (NADP+), soluble
chr1	65214527	65220787	-	65214527	65218922	A5SS&ES	0.2	50	50	ENSMUST00000186222.7	ENSMUSG00000025950.17	Idh1	chr1	protein_coding	isocitrate dehydrogenase 1 (NADP+), soluble
chr1	65218974	65220787	-	65218974	65225368	A5SS	0.5	50	50	ENSMUST00000186222.7	ENSMUSG00000025950.17	Idh1	chr1	protein_coding	isocitrate dehydrogenase 1 (NADP+), soluble
chr1	65234933	65241875	+	65234933;65235942	65235771;65241875	ES	0.5	50	50	ENSMUST00000185317.7	ENSMUSG00000025949.17	Pikfyve	chr1	protein_coding	phosphoinositide kinase, FYVE type zinc finger containing
chr1	65229658;65230310	65230213;65231304	+	65229658	65231304	cassetteExon	0.5	100	100	ENSMUST00000185317.7	ENSMUSG00000025949.17	Pikfyve	chr1	protein_coding	phosphoinositide kinase, FYVE type zinc finger containing
chr1	65231453;65231725	65231690;65234815	+	65231453	65234815	cassetteExon	0.5	100	100	ENSMUST00000185317.7	ENSMUSG00000025949.17	Pikfyve	chr1	protein_coding	phosphoinositide kinase, FYVE type zinc finger containing
chr1	65231453;65231725	65231693;65234815	+	65231453	65234815	cassetteExon	0.5	100	100	ENSMUST00000185317.7	ENSMUSG00000025949.17	Pikfyve	chr1	protein_coding	phosphoinositide kinase, FYVE type zinc finger containing
chr1	65225992	65229478	+	65225937	65229478	A5SS	0.5	50	50	ENSMUST00000185317.7	ENSMUSG00000025949.17	Pikfyve	chr1	protein_coding	phosphoinositide kinase, FYVE type zinc finger containing
chr1	65262811	65269953	+	65262811;65263488	65263321;65269953	ES	0.5	50	50	ENSMUST00000190058.7	ENSMUSG00000025949.17	Pikfyve	chr1	protein_coding	phosphoinositide kinase, FYVE type zinc finger containing
chr1	65244837	65245034	+	65244837	65255093	A3SS	0.33	50	50	ENSMUST00000190058.7	ENSMUSG00000025949.17	Pikfyve	chr1	protein_coding	phosphoinositide kinase, FYVE type zinc finger containing
chr1	65244837	65247643	+	65244837	65255093	A3SS	0.33	50	50	ENSMUST00000190058.7	ENSMUSG00000025949.17	Pikfyve	chr1	protein_coding	phosphoinositide kinase, FYVE type zinc finger containing
chr1	65244837	65247643	+	65244837	65245034	3pMXE	0.33	50	50	ENSMUST00000189925.7	ENSMUSG00000025949.17	Pikfyve	chr1	protein_coding	phosphoinositide kinase, FYVE type zinc finger containing
chr1	65231453	65231690	+	65231453	65231693	A3SS	0.33	50	50	ENSMUST00000081154.14	ENSMUSG00000025949.17	Pikfyve	chr1	protein_coding	phosphoinositide kinase, FYVE type zinc finger containing
chr1	65234933	65241875	+	65235942	65241875	5pMXE	0.5	50	50	ENSMUST00000190847.2	ENSMUSG00000025949.17	Pikfyve	chr1	protein_coding	phosphoinositide kinase, FYVE type zinc finger containing
chr1	65350829	65361128	+	65321382	65361128	A5SS	0.5	50	50	ENSMUST00000140190.8	ENSMUSG00000025946.14	Pth2r	chr1	protein_coding	parathyroid hormone 2 receptor
chr1	65966049	65967144	+	65966049	65967130	A3SS	0.5	50	50	ENSMUST00000027082.11	ENSMUSG00000025945.12	Crygf	chr1	protein_coding	crystallin, gamma F
chr1	66214654;66232340	66232278;66290821	+	66214654	66290821	cassetteExon	0.5	100	100	ENSMUST00000156636.9	ENSMUSG00000015222.19	Map2	chr1	protein_coding	microtubule-associated protein 2
chr1	66361301	66361563	+	66290871	66361563	A5SS	0.5	50	50	ENSMUST00000156636.9	ENSMUSG00000015222.19	Map2	chr1	protein_coding	microtubule-associated protein 2
chr1	66361493	66401362	+	66361627	66401362	A5SS&ES	0.5	50	50	ENSMUST00000156636.9	ENSMUSG00000015222.19	Map2	chr1	protein_coding	microtubule-associated protein 2
chr1	66403935	66419648	+	66401439	66419648	A5SS	0.5	50	50	ENSMUST00000156636.9	ENSMUSG00000015222.19	Map2	chr1	protein_coding	microtubule-associated protein 2
chr1	66464687	66472673	+	66464687;66470778	66470686;66472673	ES	0.5	50	50	ENSMUST00000114017.8	ENSMUSG00000015222.19	Map2	chr1	protein_coding	microtubule-associated protein 2
chr1	66232340	66234331	+	66232340	66290821	A3SS	0.5	50	50	ENSMUST00000114017.8	ENSMUSG00000015222.19	Map2	chr1	protein_coding	microtubule-associated protein 2
chr1	66438661	66440606	+	66438661	66440603	A3SS	0.5	50	50	ENSMUST00000114017.8	ENSMUSG00000015222.19	Map2	chr1	protein_coding	microtubule-associated protein 2
chr1	66440680	66445370	+	66440680	66459294	A3SS	0.2	50	50	ENSMUST00000114017.8	ENSMUSG00000015222.19	Map2	chr1	protein_coding	microtubule-associated protein 2
chr1	66440680	66446745	+	66440680	66459294	A3SS	0.2	50	50	ENSMUST00000114017.8	ENSMUSG00000015222.19	Map2	chr1	protein_coding	microtubule-associated protein 2
chr1	66440680	66449733	+	66440680	66459294	A3SS	0.2	50	50	ENSMUST00000114017.8	ENSMUSG00000015222.19	Map2	chr1	protein_coding	microtubule-associated protein 2
chr1	66440680	66451566	+	66440680	66459294	A3SS	0.2	50	50	ENSMUST00000114017.8	ENSMUSG00000015222.19	Map2	chr1	protein_coding	microtubule-associated protein 2
chr1	66214857	66232278	+	66214654	66232278	A5SS	0.5	50	50	ENSMUST00000114017.8	ENSMUSG00000015222.19	Map2	chr1	protein_coding	microtubule-associated protein 2
chr1	66426227	66438548	+	66419932	66438548	A5SS	0.33	50	50	ENSMUST00000114017.8	ENSMUSG00000015222.19	Map2	chr1	protein_coding	microtubule-associated protein 2
chr1	66426294	66438548	+	66419932	66438548	A5SS	0.33	50	50	ENSMUST00000114017.8	ENSMUSG00000015222.19	Map2	chr1	protein_coding	microtubule-associated protein 2
chr1	66455709	66459294	+	66440680	66459294	A5SS	0.33	50	50	ENSMUST00000114017.8	ENSMUSG00000015222.19	Map2	chr1	protein_coding	microtubule-associated protein 2
chr1	66456025	66459294	+	66440680	66459294	A5SS	0.33	50	50	ENSMUST00000114017.8	ENSMUSG00000015222.19	Map2	chr1	protein_coding	microtubule-associated protein 2
chr1	66214654	66290821	+	66232340	66290821	A5SS&ES	0.5	50	50	ENSMUST00000124873.8	ENSMUSG00000015222.19	Map2	chr1	protein_coding	microtubule-associated protein 2
chr1	66455709	66459294	+	66455709;66456025	66455891;66459294	ES	0.33	50	50	ENSMUST00000114013.8	ENSMUSG00000015222.19	Map2	chr1	protein_coding	microtubule-associated protein 2
chr1	66440680;66449978	66449733;66451566	+	66440680	66451566	cassetteExon	0.5	100	100	ENSMUST00000114013.8	ENSMUSG00000015222.19	Map2	chr1	protein_coding	microtubule-associated protein 2
chr1	66440680	66445370	+	66440680	66451566	A3SS	0.2	50	50	ENSMUST00000114013.8	ENSMUSG00000015222.19	Map2	chr1	protein_coding	microtubule-associated protein 2
chr1	66440680	66446745	+	66440680	66451566	A3SS	0.2	50	50	ENSMUST00000114013.8	ENSMUSG00000015222.19	Map2	chr1	protein_coding	microtubule-associated protein 2
chr1	66456025	66459297	+	66456025	66459294	A3SS	0.5	50	50	ENSMUST00000114013.8	ENSMUSG00000015222.19	Map2	chr1	protein_coding	microtubule-associated protein 2
chr1	66440680	66449733	+	66440680;66446981	66446745;66449733	ES	0.5	50	50	ENSMUST00000239213.2	ENSMUSG00000015222.19	Map2	chr1	protein_coding	microtubule-associated protein 2
chr1	66440680	66445370	+	66440680	66446745	A3SS	0.2	50	50	ENSMUST00000239213.2	ENSMUSG00000015222.19	Map2	chr1	protein_coding	microtubule-associated protein 2
chr1	66440680	66445370	+	66440680	66449733	A3SS	0.25	50	50	ENSMUST00000173855.8	ENSMUSG00000015222.19	Map2	chr1	protein_coding	microtubule-associated protein 2
chr1	66426294	66438548	+	66426227	66438548	A5SS	0.33	50	50	ENSMUST00000151423.9	ENSMUSG00000015222.19	Map2	chr1	protein_coding	microtubule-associated protein 2
chr1	66525000	66542689	+	66525000;66530290	66530151;66542689	ES	0.5	50	50	ENSMUST00000061620.17	ENSMUSG00000055567.19	Unc80	chr1	protein_coding	unc-80, NALCN activator
chr1	66640379	66647551	+	66640379;66645814	66645611;66647551	ES	0.5	50	50	ENSMUST00000061620.17	ENSMUSG00000055567.19	Unc80	chr1	protein_coding	unc-80, NALCN activator
chr1	66722446	66731667	+	66722446;66724831	66724775;66731667	ES	0.5	50	50	ENSMUST00000061620.17	ENSMUSG00000055567.19	Unc80	chr1	protein_coding	unc-80, NALCN activator
chr1	66745684;66753875	66753736;66754272	+	66745684	66754272	cassetteExon	0.5	100	100	ENSMUST00000151016.2	ENSMUSG00000026005.16	Rpe	chr1	protein_coding	ribulose-5-phosphate-3-epimerase
chr1	66740176	66740776	+	66740576	66740776	A5SS	0.33	50	50	ENSMUST00000151016.2	ENSMUSG00000026005.16	Rpe	chr1	protein_coding	ribulose-5-phosphate-3-epimerase
chr1	66740187	66740776	+	66740576	66740776	A5SS	0.33	50	50	ENSMUST00000151016.2	ENSMUSG00000026005.16	Rpe	chr1	protein_coding	ribulose-5-phosphate-3-epimerase
chr1	66740187	66745605	+	66740807	66745605	A5SS&ES	0.5	50	50	ENSMUST00000151016.2	ENSMUSG00000026005.16	Rpe	chr1	protein_coding	ribulose-5-phosphate-3-epimerase
chr1	66740187;66740795	66740776;66753736	+	66740187;66745684	66745605;66753736	MXE	0.5	100	100	ENSMUST00000027157.10	ENSMUSG00000026005.16	Rpe	chr1	protein_coding	ribulose-5-phosphate-3-epimerase
chr1	66740187;66740807	66740776;66745605	+	66740187	66745605	cassetteExon	0.5	100	100	ENSMUST00000027157.10	ENSMUSG00000026005.16	Rpe	chr1	protein_coding	ribulose-5-phosphate-3-epimerase
chr1	66740187	66740776	+	66740176	66740776	A5SS	0.33	50	50	ENSMUST00000113995.2	ENSMUSG00000026005.16	Rpe	chr1	protein_coding	ribulose-5-phosphate-3-epimerase
chr1	66740795	66753736	+	66745684	66753736	A5SS&ES	0.5	50	50	ENSMUST00000113995.2	ENSMUSG00000026005.16	Rpe	chr1	protein_coding	ribulose-5-phosphate-3-epimerase
chr1	66745684	66754272	+	66753875	66754272	A5SS&ES	0.5	50	50	ENSMUST00000190404.2	ENSMUSG00000026005.16	Rpe	chr1	protein_coding	ribulose-5-phosphate-3-epimerase
chr1	66765967	66774796	-	66765967;66767734	66767603;66774796	ES	0.5	50	50	ENSMUST00000129190.8	ENSMUSG00000026004.16	Kansl1l	chr1	protein_coding	KAT8 regulatory NSL complex subunit 1-like
chr1	66812778	66817126	-	66812673	66817126	A3SS	0.5	50	50	ENSMUST00000129190.8	ENSMUSG00000026004.16	Kansl1l	chr1	protein_coding	KAT8 regulatory NSL complex subunit 1-like
chr1	66841327	66846684	-	66841327	66856533	A5SS	0.5	50	50	ENSMUST00000068168.10	ENSMUSG00000026004.16	Kansl1l	chr1	protein_coding	KAT8 regulatory NSL complex subunit 1-like
chr1	66896713	66897402	-	66896713	66902332	A5SS	0.5	50	50	ENSMUST00000027153.6	ENSMUSG00000026003.6	Acadl	chr1	protein_coding	acyl-Coenzyme A dehydrogenase, long-chain
chr1	66969488;66973432	66973405;66973677	-	66969488	66973677	cassetteExon	0.5	100	100	ENSMUST00000186202.7	ENSMUSG00000061816.16	Myl1	chr1	protein_coding	myosin, light polypeptide 1
chr1	66973701	66974435	-	66973701	66974650	A5SS	0.5	50	50	ENSMUST00000186202.7	ENSMUSG00000061816.16	Myl1	chr1	protein_coding	myosin, light polypeptide 1
chr1	66969488	66973677	-	66969488	66973405	A5SS&ES	0.5	50	50	ENSMUST00000027151.12	ENSMUSG00000061816.16	Myl1	chr1	protein_coding	myosin, light polypeptide 1
chr1	66973432	66973677	-	66973432	66983951	A5SS	0.5	50	50	ENSMUST00000027151.12	ENSMUSG00000061816.16	Myl1	chr1	protein_coding	myosin, light polypeptide 1
chr1	67048533	67060017	-	67048533;67049205	67049070;67060017	ES	0.5	50	50	ENSMUST00000027149.12	ENSMUSG00000026000.17	Lancl1	chr1	protein_coding	LanC (bacterial lantibiotic synthetase component C)-like 1
chr1	67077750	67077931	-	67077750	67077935	A5SS	0.33	50	50	ENSMUST00000027149.12	ENSMUSG00000026000.17	Lancl1	chr1	protein_coding	LanC (bacterial lantibiotic synthetase component C)-like 1
chr1	67077750	67077961	-	67077750	67077935	A5SS	0.33	50	50	ENSMUST00000027149.12	ENSMUSG00000026000.17	Lancl1	chr1	protein_coding	LanC (bacterial lantibiotic synthetase component C)-like 1
chr1	67077750	67077961	-	67077750	67077931	A5SS	0.33	50	50	ENSMUST00000119559.8	ENSMUSG00000026000.17	Lancl1	chr1	protein_coding	LanC (bacterial lantibiotic synthetase component C)-like 1
chr1	67048533	67060017	-	67049205	67060017	3pMXE	0.5	50	50	ENSMUST00000149996.2	ENSMUSG00000026000.17	Lancl1	chr1	protein_coding	LanC (bacterial lantibiotic synthetase component C)-like 1
chr1	68081897	68110677	-	68081897;68083114	68083067;68110677	ES	0.5	50	50	ENSMUST00000119142.8	ENSMUSG00000062209.16	Erbb4	chr1	protein_coding	erb-b2 receptor tyrosine kinase 4
chr1	68298472;68329642	68329598;68337446	-	68298472;68329476	68329402;68337446	MXE	0.5	100	100	ENSMUST00000119142.8	ENSMUSG00000062209.16	Erbb4	chr1	protein_coding	erb-b2 receptor tyrosine kinase 4
chr1	68329476;68329642	68329598;68337446	-	68329476	68337446	cassetteExon	0.5	100	100	ENSMUST00000119142.8	ENSMUSG00000062209.16	Erbb4	chr1	protein_coding	erb-b2 receptor tyrosine kinase 4
chr1	68298472;68329476	68329402;68329598	-	68298472	68329598	cassetteExon	0.5	100	100	ENSMUST00000153432.2	ENSMUSG00000062209.16	Erbb4	chr1	protein_coding	erb-b2 receptor tyrosine kinase 4
chr1	68298472	68329598	-	68329476	68329598	3pMXE	0.5	50	50	ENSMUST00000131148.2	ENSMUSG00000062209.16	Erbb4	chr1	protein_coding	erb-b2 receptor tyrosine kinase 4
chr1	69578651	69587758	-	69578651;69581529	69581386;69587758	ES	0.5	50	50	ENSMUST00000027146.9	ENSMUSG00000025997.14	Ikzf2	chr1	protein_coding	IKAROS family zinc finger 2
chr1	69581529	69609652	-	69581529;69587895	69587758;69609652	ES	0.5	50	50	ENSMUST00000027146.9	ENSMUSG00000025997.14	Ikzf2	chr1	protein_coding	IKAROS family zinc finger 2
chr1	69723331	69726200	-	69723331	69724853	5pMXE	0.25	50	50	ENSMUST00000027146.9	ENSMUSG00000025997.14	Ikzf2	chr1	protein_coding	IKAROS family zinc finger 2
chr1	69609819	69617018	-	69609819	69616940	A5SS	0.5	50	50	ENSMUST00000027146.9	ENSMUSG00000025997.14	Ikzf2	chr1	protein_coding	IKAROS family zinc finger 2
chr1	69723331	69724411	-	69723331	69724853	A5SS	0.25	50	50	ENSMUST00000027146.9	ENSMUSG00000025997.14	Ikzf2	chr1	protein_coding	IKAROS family zinc finger 2
chr1	69723331	69724890	-	69723331	69724853	A5SS	0.25	50	50	ENSMUST00000027146.9	ENSMUSG00000025997.14	Ikzf2	chr1	protein_coding	IKAROS family zinc finger 2
chr1	69723331	69726200	-	69723331	69724890	5pMXE	0.25	50	50	ENSMUST00000190771.7	ENSMUSG00000025997.14	Ikzf2	chr1	protein_coding	IKAROS family zinc finger 2
chr1	69723331	69724411	-	69723331	69724890	A5SS	0.25	50	50	ENSMUST00000190771.7	ENSMUSG00000025997.14	Ikzf2	chr1	protein_coding	IKAROS family zinc finger 2
chr1	69723331	69726200	-	69723331;69724956	69724853;69726200	ES	0.5	50	50	ENSMUST00000187184.7	ENSMUSG00000025997.14	Ikzf2	chr1	protein_coding	IKAROS family zinc finger 2
chr1	69578651;69581529	69581386;69609652	-	69578651;69587895	69587758;69609652	MXE	0.5	100	100	ENSMUST00000190855.7	ENSMUSG00000025997.14	Ikzf2	chr1	protein_coding	IKAROS family zinc finger 2
chr1	69578651;69587895	69587758;69722369	-	69578651;69617206	69581386;69722369	MXE	0.5	100	100	ENSMUST00000188110.7	ENSMUSG00000025997.14	Ikzf2	chr1	protein_coding	IKAROS family zinc finger 2
chr1	69581529;69587895	69587758;69722369	-	69581529;69617206	69609652;69722369	MXE	0.5	100	100	ENSMUST00000188110.7	ENSMUSG00000025997.14	Ikzf2	chr1	protein_coding	IKAROS family zinc finger 2
chr1	69617206	69722369	-	69587895	69722369	A3SS	0.5	50	50	ENSMUST00000191262.7	ENSMUSG00000025997.14	Ikzf2	chr1	protein_coding	IKAROS family zinc finger 2
chr1	69581529	69609652	-	69581529	69587758	A5SS&ES	0.5	50	50	ENSMUST00000191262.7	ENSMUSG00000025997.14	Ikzf2	chr1	protein_coding	IKAROS family zinc finger 2
chr1	69587895	69609652	-	69587895	69722369	A5SS	0.5	50	50	ENSMUST00000191262.7	ENSMUSG00000025997.14	Ikzf2	chr1	protein_coding	IKAROS family zinc finger 2
chr1	69723331	69726200	-	69723331	69724411	5pMXE	0.25	50	50	ENSMUST00000190016.2	ENSMUSG00000025997.14	Ikzf2	chr1	protein_coding	IKAROS family zinc finger 2
chr1	69723331;69724956	69724890;69726200	-	69723331	69726200	cassetteExon	0.5	100	100	ENSMUST00000188919.2	ENSMUSG00000025997.14	Ikzf2	chr1	protein_coding	IKAROS family zinc finger 2
chr1	70304208	70310353	+	70304208	70306276	3pMXE	0.25	50	50	ENSMUST00000187159.7	ENSMUSG00000053153.15	Spag16	chr1	protein_coding	sperm associated antigen 16
chr1	70304208	70338742	+	70304208	70306276	3pMXE	0.25	50	50	ENSMUST00000187159.7	ENSMUSG00000053153.15	Spag16	chr1	protein_coding	sperm associated antigen 16
chr1	69912410	69912627	+	69912410	69926651	A3SS	0.5	50	50	ENSMUST00000187159.7	ENSMUSG00000053153.15	Spag16	chr1	protein_coding	sperm associated antigen 16
chr1	69935740	69962821	+	69935740	70035940	A3SS	0.5	50	50	ENSMUST00000187159.7	ENSMUSG00000053153.15	Spag16	chr1	protein_coding	sperm associated antigen 16
chr1	70304208	70306271	+	70304208	70306276	A3SS	0.25	50	50	ENSMUST00000187159.7	ENSMUSG00000053153.15	Spag16	chr1	protein_coding	sperm associated antigen 16
chr1	69871009	69883438	+	69882174	69883438	A5SS&ES	0.5	50	50	ENSMUST00000187159.7	ENSMUSG00000053153.15	Spag16	chr1	protein_coding	sperm associated antigen 16
chr1	69990932	70035940	+	69935740	70035940	A5SS	0.5	50	50	ENSMUST00000187159.7	ENSMUSG00000053153.15	Spag16	chr1	protein_coding	sperm associated antigen 16
chr1	70304208	70310353	+	70304208	70306271	3pMXE	0.25	50	50	ENSMUST00000190833.7	ENSMUSG00000053153.15	Spag16	chr1	protein_coding	sperm associated antigen 16
chr1	70304208	70338742	+	70304208	70306271	3pMXE	0.25	50	50	ENSMUST00000190833.7	ENSMUSG00000053153.15	Spag16	chr1	protein_coding	sperm associated antigen 16
chr1	70304208	70310353	+	70304208	70338742	A3SS	0.25	50	50	ENSMUST00000065425.12	ENSMUSG00000053153.15	Spag16	chr1	protein_coding	sperm associated antigen 16
chr1	70768327	70921226	+	70768327;70790225	70790096;70921226	ES	0.5	50	50	ENSMUST00000053922.12	ENSMUSG00000045648.16	Vwc2l	chr1	protein_coding	von Willebrand factor C domain-containing protein 2-like
chr1	71596782	71600048	+	71596782;71598461	71598385;71600048	ES	0.5	50	50	ENSMUST00000027384.6	ENSMUSG00000026192.14	Atic	chr1	protein_coding	5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase
chr1	71641656	71644129	-	71641656;71643088	71642819;71644129	ES	0.5	50	50	ENSMUST00000188894.7	ENSMUSG00000026193.16	Fn1	chr1	protein_coding	fibronectin 1
chr1	71651809;71653194	71652922;71654519	-	71651809	71654519	cassetteExon	0.5	100	100	ENSMUST00000188894.7	ENSMUSG00000026193.16	Fn1	chr1	protein_coding	fibronectin 1
chr1	71636546	71637533	-	71636906	71637533	A3SS	0.33	50	50	ENSMUST00000188894.7	ENSMUSG00000026193.16	Fn1	chr1	protein_coding	fibronectin 1
chr1	71636831	71637533	-	71636906	71637533	A3SS	0.33	50	50	ENSMUST00000188894.7	ENSMUSG00000026193.16	Fn1	chr1	protein_coding	fibronectin 1
chr1	71639735	71640360	-	71639625	71640360	A3SS	0.5	50	50	ENSMUST00000188894.7	ENSMUSG00000026193.16	Fn1	chr1	protein_coding	fibronectin 1
chr1	71671274	71680311	-	71679603	71680311	A3SS&ES	0.5	50	50	ENSMUST00000188894.7	ENSMUSG00000026193.16	Fn1	chr1	protein_coding	fibronectin 1
chr1	71636546;71636831	71636801;71637533	-	71636546	71637533	cassetteExon	0.5	100	100	ENSMUST00000188674.7	ENSMUSG00000026193.16	Fn1	chr1	protein_coding	fibronectin 1
chr1	71636546;71636906	71636801;71637533	-	71636546	71637533	cassetteExon	0.5	100	100	ENSMUST00000188674.7	ENSMUSG00000026193.16	Fn1	chr1	protein_coding	fibronectin 1
chr1	71636546	71637533	-	71636831	71637533	A3SS	0.33	50	50	ENSMUST00000187938.7	ENSMUSG00000026193.16	Fn1	chr1	protein_coding	fibronectin 1
chr1	71690808	71691991	-	71688484	71691991	A3SS	0.5	50	50	ENSMUST00000186736.2	ENSMUSG00000026193.16	Fn1	chr1	protein_coding	fibronectin 1
chr1	71688484	71689721	-	71688484	71691991	A5SS	0.5	50	50	ENSMUST00000186736.2	ENSMUSG00000026193.16	Fn1	chr1	protein_coding	fibronectin 1
chr1	71692545;71693657	71693477;71696204	+	71692545	71696204	cassetteExon	0.5	100	100	ENSMUST00000097699.3	ENSMUSG00000073652.11	Apol7d	chr1	lncRNA	apolipoprotein L 7d
chr1	71696325	71699911	+	71692243	71699911	A5SS	0.5	50	50	ENSMUST00000127218.8	ENSMUSG00000073652.11	Apol7d	chr1	lncRNA	apolipoprotein L 7d
chr1	71927873	71928791	+	71927873	71929851	A3SS	0.33	50	50	ENSMUST00000189680.7	ENSMUSG00000099707.7	Gm8883	chr1	lncRNA	predicted gene 8883
chr1	71927873	71929463	+	71927873	71929851	A3SS	0.33	50	50	ENSMUST00000189680.7	ENSMUSG00000099707.7	Gm8883	chr1	lncRNA	predicted gene 8883
chr1	71927680	71927778	+	71927360	71927778	A5SS	0.5	50	50	ENSMUST00000189680.7	ENSMUSG00000099707.7	Gm8883	chr1	lncRNA	predicted gene 8883
chr1	71927873	71929463	+	71927873	71928791	3pMXE	0.33	50	50	ENSMUST00000187594.7	ENSMUSG00000099707.7	Gm8883	chr1	lncRNA	predicted gene 8883
chr1	71936059	71938017	-	71936059	71956129	A5SS	0.5	50	50	ENSMUST00000187553.2	ENSMUSG00000101211.2	Gm28818	chr1	lncRNA	predicted gene 28818
chr1	72314126;72315490	72315325;72316446	-	72314126;72314961	72314812;72316446	MXE	0.5	100	100	ENSMUST00000134840.8	ENSMUSG00000026189.14	Pecr	chr1	protein_coding	peroxisomal trans-2-enoyl-CoA reductase
chr1	72306329	72306566	-	72301222	72306566	A3SS	0.5	50	50	ENSMUST00000134840.8	ENSMUSG00000026189.14	Pecr	chr1	protein_coding	peroxisomal trans-2-enoyl-CoA reductase
chr1	72306658	72323252	-	72316579	72323252	A3SS&ES	0.5	50	50	ENSMUST00000134840.8	ENSMUSG00000026189.14	Pecr	chr1	protein_coding	peroxisomal trans-2-enoyl-CoA reductase
chr1	72323625;72332204	72332079;72336929	+	72323625	72336929	cassetteExon	0.5	100	100	ENSMUST00000027380.12	ENSMUSG00000026188.12	Tmem169	chr1	protein_coding	transmembrane protein 169
chr1	72622597	72624797	+	72622597;72624401	72624365;72624797	ES	0.33	50	50	ENSMUST00000145868.8	ENSMUSG00000039354.17	Smarcal1	chr1	protein_coding	SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1
chr1	72622896	72624797	+	72624401	72624797	A5SS&ES	0.33	50	50	ENSMUST00000145868.8	ENSMUSG00000039354.17	Smarcal1	chr1	protein_coding	SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1
chr1	72622896	72624797	+	72622597	72624797	A5SS	0.33	50	50	ENSMUST00000133123.8	ENSMUSG00000039354.17	Smarcal1	chr1	protein_coding	SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1
chr1	72625563	72626210	+	72625077	72626210	A5SS	0.5	50	50	ENSMUST00000133123.8	ENSMUSG00000039354.17	Smarcal1	chr1	protein_coding	SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1
chr1	72681431;72681646	72681603;72681970	+	72681431	72681970	cassetteExon	0.5	100	100	ENSMUST00000212057.2	ENSMUSG00000110712.2	Gm39662	chr1	lncRNA	predicted gene, 39662
chr1	72729542;72737755	72737580;72739611	-	72729542	72739611	cassetteExon	0.5	100	100	ENSMUST00000212573.2	ENSMUSG00000039342.6	Ankar	chr1	protein_coding	ankyrin and armadillo repeat containing
chr1	72718703	72719140	-	72718706	72719140	A3SS	0.5	50	50	ENSMUST00000212573.2	ENSMUSG00000039342.6	Ankar	chr1	protein_coding	ankyrin and armadillo repeat containing
chr1	72738215	72739611	-	72729542	72739611	A3SS	0.33	50	50	ENSMUST00000212573.2	ENSMUSG00000039342.6	Ankar	chr1	protein_coding	ankyrin and armadillo repeat containing
chr1	72729542	72739611	-	72729542;72738215	72737580;72739611	ES	0.33	50	50	ENSMUST00000211837.2	ENSMUSG00000039342.6	Ankar	chr1	protein_coding	ankyrin and armadillo repeat containing
chr1	72737755	72739611	-	72738215	72739611	A3SS	0.33	50	50	ENSMUST00000211837.2	ENSMUSG00000039342.6	Ankar	chr1	protein_coding	ankyrin and armadillo repeat containing
chr1	72751383;72752498	72752341;72752661	+	72751383	72752661	cassetteExon	0.5	100	100	ENSMUST00000059980.11	ENSMUSG00000046330.11	Rpl37a	chr1	protein_coding	ribosomal protein L37a
chr1	72864633	72888245	+	72864123	72888245	A5SS	0.5	50	50	ENSMUST00000047328.11	ENSMUSG00000039323.19	Igfbp2	chr1	protein_coding	insulin-like growth factor binding protein 2
chr1	73062151	73064481	+	73062151	73063857	3pMXE	0.5	50	50	ENSMUST00000188793.2	ENSMUSG00000101968.7	1700027A15Rik	chr1	lncRNA	RIKEN cDNA 1700027A15 gene
chr1	73056760	73064481	+	73057148	73064481	A5SS&ES	0.25	50	50	ENSMUST00000185768.7	ENSMUSG00000101968.7	1700027A15Rik	chr1	lncRNA	RIKEN cDNA 1700027A15 gene
chr1	73062151	73064481	+	73057148	73064481	A5SS	0.25	50	50	ENSMUST00000185768.7	ENSMUSG00000101968.7	1700027A15Rik	chr1	lncRNA	RIKEN cDNA 1700027A15 gene
chr1	73063973	73064481	+	73057148	73064481	A5SS	0.25	50	50	ENSMUST00000185768.7	ENSMUSG00000101968.7	1700027A15Rik	chr1	lncRNA	RIKEN cDNA 1700027A15 gene
chr1	73062151	73064481	+	73056760	73064481	A5SS	0.25	50	50	ENSMUST00000191122.2	ENSMUSG00000101968.7	1700027A15Rik	chr1	lncRNA	RIKEN cDNA 1700027A15 gene
chr1	73063973	73064481	+	73056760	73064481	A5SS	0.25	50	50	ENSMUST00000191122.2	ENSMUSG00000101968.7	1700027A15Rik	chr1	lncRNA	RIKEN cDNA 1700027A15 gene
chr1	73062151;73063973	73063857;73064481	+	73062151	73064481	cassetteExon	0.5	100	100	ENSMUST00000188349.2	ENSMUSG00000101968.7	1700027A15Rik	chr1	lncRNA	RIKEN cDNA 1700027A15 gene
chr1	73062151	73064481	+	73063973	73064481	5pMXE	0.25	50	50	ENSMUST00000190525.2	ENSMUSG00000101968.7	1700027A15Rik	chr1	lncRNA	RIKEN cDNA 1700027A15 gene
chr1	73439435;73440157	73439994;73444155	-	73439435	73444155	cassetteExon	0.5	100	100	ENSMUST00000190229.7	ENSMUSG00000099877.7	Pinc	chr1	lncRNA	pregnancy induced noncoding RNA
chr1	73712225	73897224	-	73712225	73782759	5pMXE	0.5	50	50	ENSMUST00000191114.7	ENSMUSG00000100301.7	6030407O03Rik	chr1	lncRNA	RIKEN cDNA 6030407O03 gene
chr1	73967269	73975491	-	73967269;73975095	73975057;73975491	ES	0.5	50	50	ENSMUST00000169786.8	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	73975095	73976384	-	73975095;73975514	73975491;73976384	ES	0.33	50	50	ENSMUST00000169786.8	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	73959755	73960117	-	73959758	73960117	A3SS	0.5	50	50	ENSMUST00000169786.8	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	74034531	74036208	-	74034540	74036208	A3SS	0.5	50	50	ENSMUST00000169786.8	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	73967269	73967620	-	73967269	73975057	A5SS	0.16	50	50	ENSMUST00000169786.8	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	73967269	73969476	-	73967269	73975057	A5SS	0.16	50	50	ENSMUST00000169786.8	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	73967269	73969922	-	73967269	73975057	A5SS	0.16	50	50	ENSMUST00000169786.8	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	73993109	74002070	-	73993109	74020073	A5SS	0.5	50	50	ENSMUST00000169786.8	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	74036263	74037404	-	74036263	74041446	A5SS	0.33	50	50	ENSMUST00000169786.8	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	74036263	74040607	-	74036263	74041446	A5SS	0.33	50	50	ENSMUST00000169786.8	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	74055345	74055557	-	74055345	74107768	A5SS	0.25	50	50	ENSMUST00000169786.8	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	74055345	74076018	-	74055345	74107768	A5SS	0.25	50	50	ENSMUST00000169786.8	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	74055345	74076130	-	74055345	74107768	A5SS	0.25	50	50	ENSMUST00000169786.8	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	74118472	74130332	-	74118472	74163451	A5SS	0.2	50	50	ENSMUST00000169786.8	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	74118472	74135908	-	74118472	74163451	A5SS	0.2	50	50	ENSMUST00000169786.8	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	74118472	74135954	-	74118472	74163451	A5SS	0.2	50	50	ENSMUST00000169786.8	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	74118472	74137381	-	74118472	74163451	A5SS	0.2	50	50	ENSMUST00000169786.8	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	74118472	74135908	-	74118472	74130332	5pMXE	0.2	50	50	ENSMUST00000187584.7	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	74118472	74135954	-	74118472	74130332	5pMXE	0.2	50	50	ENSMUST00000187584.7	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	74118472	74137381	-	74118472	74130332	5pMXE	0.2	50	50	ENSMUST00000187584.7	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	73967269;73975095	73975057;73976384	-	73967269	73976384	cassetteExon	0.5	100	100	ENSMUST00000187584.7	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	73967269;73975514	73975057;73976384	-	73967269	73976384	cassetteExon	0.5	100	100	ENSMUST00000187584.7	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	73967269;73975514	73975491;73976384	-	73967269	73976384	cassetteExon	0.5	100	100	ENSMUST00000187584.7	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	73967269	73967620	-	73967269	73976384	A5SS	0.16	50	50	ENSMUST00000187584.7	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	73967269	73969476	-	73967269	73976384	A5SS	0.16	50	50	ENSMUST00000187584.7	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	73967269	73969922	-	73967269	73976384	A5SS	0.16	50	50	ENSMUST00000187584.7	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	73967269	73969476	-	73967269	73967620	5pMXE	0.16	50	50	ENSMUST00000187691.7	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	73967269	73969922	-	73967269	73967620	5pMXE	0.16	50	50	ENSMUST00000187691.7	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	73967269	73975491	-	73967269	73967620	5pMXE	0.16	50	50	ENSMUST00000187691.7	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	73967269;73975095	73975057;73976384	-	73967269;73975514	73975491;73976384	MXE	0.5	100	100	ENSMUST00000185331.7	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	73967269	73969476	-	73967269	73975491	A5SS	0.16	50	50	ENSMUST00000185331.7	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	73967269	73969922	-	73967269	73975491	A5SS	0.16	50	50	ENSMUST00000185331.7	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	74118472	74135908	-	74118472	74137381	A5SS	0.2	50	50	ENSMUST00000239451.2	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	74118472	74135954	-	74118472	74137381	A5SS	0.2	50	50	ENSMUST00000239451.2	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	73967269	73969476	-	73967269	73969922	A5SS	0.16	50	50	ENSMUST00000185264.7	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	74036263	74040607	-	74036263	74037404	5pMXE	0.33	50	50	ENSMUST00000191264.7	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	74055345	74076018	-	74055345	74055557	5pMXE	0.25	50	50	ENSMUST00000186381.7	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	74055345	74076130	-	74055345	74055557	5pMXE	0.25	50	50	ENSMUST00000186381.7	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	74055345	74076018	-	74055345	74076130	A5SS	0.25	50	50	ENSMUST00000187281.7	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	74118472	74135954	-	74118472	74135908	A5SS	0.2	50	50	ENSMUST00000191204.7	ENSMUSG00000055322.17	Tns1	chr1	protein_coding	tensin 1
chr1	74166882	74167005	+	74166882	74167028	A3SS	0.5	50	50	ENSMUST00000080167.11	ENSMUSG00000061815.12	Rufy4	chr1	protein_coding	RUN and FYVE domain containing 4
chr1	74275769	74275977	+	74275481	74275977	A5SS	0.5	50	50	ENSMUST00000185733.2	ENSMUSG00000006304.15	Arpc2	chr1	protein_coding	actin related protein 2/3 complex, subunit 2
chr1	74276206	74285239	+	74276058	74285239	A5SS	0.5	50	50	ENSMUST00000113820.9	ENSMUSG00000006304.15	Arpc2	chr1	protein_coding	actin related protein 2/3 complex, subunit 2
chr1	74323203	74323662	-	74323200	74323662	A3SS	0.5	50	50	ENSMUST00000006462.14	ENSMUSG00000006299.14	Aamp	chr1	protein_coding	angio-associated migratory protein
chr1	74320591	74321600	-	74320591	74320686	A5SS&ES	0.5	50	50	ENSMUST00000006462.14	ENSMUSG00000006299.14	Aamp	chr1	protein_coding	angio-associated migratory protein
chr1	74323200	74323333	-	74323200	74323662	A5SS	0.5	50	50	ENSMUST00000006462.14	ENSMUSG00000006299.14	Aamp	chr1	protein_coding	angio-associated migratory protein
chr1	74325169	74386544	+	74325169	74326251	3pMXE	0.5	50	50	ENSMUST00000113805.8	ENSMUSG00000026179.15	Pnkd	chr1	protein_coding	paroxysmal nonkinesiogenic dyskinesia
chr1	74325169;74326367	74326251;74386544	+	74325169	74386544	cassetteExon	0.5	100	100	ENSMUST00000027370.13	ENSMUSG00000026179.15	Pnkd	chr1	protein_coding	paroxysmal nonkinesiogenic dyskinesia
chr1	74371950	74386544	+	74325169	74386544	A5SS	0.33	50	50	ENSMUST00000027370.13	ENSMUSG00000026179.15	Pnkd	chr1	protein_coding	paroxysmal nonkinesiogenic dyskinesia
chr1	74371950	74386544	+	74326367	74386544	A5SS	0.33	50	50	ENSMUST00000087226.11	ENSMUSG00000026179.15	Pnkd	chr1	protein_coding	paroxysmal nonkinesiogenic dyskinesia
chr1	74334598	74344672	-	74334598	74343282	5pMXE	0.25	50	50	ENSMUST00000016309.16	ENSMUSG00000006301.18	Tmbim1	chr1	protein_coding	transmembrane BAX inhibitor motif containing 1
chr1	74329227	74329911	-	74329083	74329911	A3SS	0.5	50	50	ENSMUST00000016309.16	ENSMUSG00000006301.18	Tmbim1	chr1	protein_coding	transmembrane BAX inhibitor motif containing 1
chr1	74332789	74333067	-	74332228	74333067	A3SS	0.5	50	50	ENSMUST00000016309.16	ENSMUSG00000006301.18	Tmbim1	chr1	protein_coding	transmembrane BAX inhibitor motif containing 1
chr1	74334598	74334684	-	74334598	74343282	A5SS	0.25	50	50	ENSMUST00000016309.16	ENSMUSG00000006301.18	Tmbim1	chr1	protein_coding	transmembrane BAX inhibitor motif containing 1
chr1	74334598	74342934	-	74334598	74343282	A5SS	0.25	50	50	ENSMUST00000016309.16	ENSMUSG00000006301.18	Tmbim1	chr1	protein_coding	transmembrane BAX inhibitor motif containing 1
chr1	74334598	74342934	-	74334598	74334684	5pMXE	0.25	50	50	ENSMUST00000152603.8	ENSMUSG00000006301.18	Tmbim1	chr1	protein_coding	transmembrane BAX inhibitor motif containing 1
chr1	74334598	74344672	-	74334598	74334684	5pMXE	0.25	50	50	ENSMUST00000152603.8	ENSMUSG00000006301.18	Tmbim1	chr1	protein_coding	transmembrane BAX inhibitor motif containing 1
chr1	74334598	74342934	-	74334598	74344672	A5SS	0.25	50	50	ENSMUST00000130763.8	ENSMUSG00000006301.18	Tmbim1	chr1	protein_coding	transmembrane BAX inhibitor motif containing 1
chr1	74401681	74401909	+	74401818	74401909	A5SS	0.5	50	50	ENSMUST00000097697.8	ENSMUSG00000073650.9	Catip	chr1	protein_coding	ciliogenesis associated TTC17 interacting protein
chr1	74421053	74422784	+	74421053;74422686	74422597;74422784	ES	0.5	50	50	ENSMUST00000187516.7	ENSMUSG00000026177.12	Slc11a1	chr1	protein_coding	solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1
chr1	74415010;74416074	74415952;74416316	+	74415010	74416316	cassetteExon	0.5	100	100	ENSMUST00000187516.7	ENSMUSG00000026177.12	Slc11a1	chr1	protein_coding	solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1
chr1	74414480	74414761	+	74414480	74414877	A3SS	0.33	50	50	ENSMUST00000187516.7	ENSMUSG00000026177.12	Slc11a1	chr1	protein_coding	solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1
chr1	74414480	74414929	+	74414480	74414877	A3SS	0.33	50	50	ENSMUST00000187516.7	ENSMUSG00000026177.12	Slc11a1	chr1	protein_coding	solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1
chr1	74415952	74416316	+	74415010	74416316	A5SS	0.33	50	50	ENSMUST00000187516.7	ENSMUSG00000026177.12	Slc11a1	chr1	protein_coding	solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1
chr1	74414480	74414761	+	74414480	74414929	A3SS	0.33	50	50	ENSMUST00000131511.8	ENSMUSG00000026177.12	Slc11a1	chr1	protein_coding	solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1
chr1	74415010	74416316	+	74415010	74415952	3pMXE	0.5	50	50	ENSMUST00000135137.2	ENSMUSG00000026177.12	Slc11a1	chr1	protein_coding	solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1
chr1	74416074	74416316	+	74415952	74416316	A5SS	0.33	50	50	ENSMUST00000155865.2	ENSMUSG00000026177.12	Slc11a1	chr1	protein_coding	solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1
chr1	74421053	74422784	+	74422686	74422784	5pMXE	0.5	50	50	ENSMUST00000127487.2	ENSMUSG00000026177.12	Slc11a1	chr1	protein_coding	solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1
chr1	74431408	74432437	+	74431123	74432437	A5SS	0.5	50	50	ENSMUST00000027367.14	ENSMUSG00000026176.14	Ctdsp1	chr1	protein_coding	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
chr1	74458262	74458728	+	74457715	74458728	A5SS	0.5	50	50	ENSMUST00000027366.13	ENSMUSG00000026175.13	Vil1	chr1	protein_coding	villin 1
chr1	74539259	74545309	-	74539259	74544819	5pMXE	0.33	50	50	ENSMUST00000044260.11	ENSMUSG00000033364.14	Usp37	chr1	protein_coding	ubiquitin specific peptidase 37
chr1	74539259	74570222	-	74539259	74544819	5pMXE	0.33	50	50	ENSMUST00000044260.11	ENSMUSG00000033364.14	Usp37	chr1	protein_coding	ubiquitin specific peptidase 37
chr1	74495379;74499139	74499074;74500725	-	74495379	74500725	cassetteExon	0.5	100	100	ENSMUST00000044260.11	ENSMUSG00000033364.14	Usp37	chr1	protein_coding	ubiquitin specific peptidase 37
chr1	74535012;74535251	74535096;74539115	-	74535012	74539115	cassetteExon	0.5	100	100	ENSMUST00000044260.11	ENSMUSG00000033364.14	Usp37	chr1	protein_coding	ubiquitin specific peptidase 37
chr1	74506153	74506512	-	74506153	74507426	A5SS	0.5	50	50	ENSMUST00000044260.11	ENSMUSG00000033364.14	Usp37	chr1	protein_coding	ubiquitin specific peptidase 37
chr1	74539259	74545309	-	74539259	74570222	A5SS	0.33	50	50	ENSMUST00000189257.7	ENSMUSG00000033364.14	Usp37	chr1	protein_coding	ubiquitin specific peptidase 37
chr1	74562772;74564252	74564189;74566151	+	74562772	74566151	cassetteExon	0.5	100	100	ENSMUST00000087215.7	ENSMUSG00000026174.10	Cnot9	chr1	protein_coding	CCR4-NOT transcription complex, subunit 9
chr1	74545373	74556229	+	74545620	74556229	A5SS	0.5	50	50	ENSMUST00000087215.7	ENSMUSG00000026174.10	Cnot9	chr1	protein_coding	CCR4-NOT transcription complex, subunit 9
chr1	74601989	74603536	+	74601989;74602782	74602610;74603536	ES	0.5	50	50	ENSMUST00000141412.8	ENSMUSG00000026173.16	Plcd4	chr1	protein_coding	phospholipase C, delta 4
chr1	74599652	74601214	+	74599652	74601001	A3SS&ES	0.33	50	50	ENSMUST00000141412.8	ENSMUSG00000026173.16	Plcd4	chr1	protein_coding	phospholipase C, delta 4
chr1	74601096	74601214	+	74601096	74601180	A3SS	0.5	50	50	ENSMUST00000141412.8	ENSMUSG00000026173.16	Plcd4	chr1	protein_coding	phospholipase C, delta 4
chr1	74604340	74604447	+	74604340	74604419	A3SS	0.5	50	50	ENSMUST00000141412.8	ENSMUSG00000026173.16	Plcd4	chr1	protein_coding	phospholipase C, delta 4
chr1	74583809	74587072	+	74582187	74587072	A5SS	0.5	50	50	ENSMUST00000141412.8	ENSMUSG00000026173.16	Plcd4	chr1	protein_coding	phospholipase C, delta 4
chr1	74599652	74601214	+	74599652;74601096	74601001;74601214	ES	0.5	50	50	ENSMUST00000113749.8	ENSMUSG00000026173.16	Plcd4	chr1	protein_coding	phospholipase C, delta 4
chr1	74599652	74601873	+	74599652;74601382	74601214;74601873	ES	0.5	50	50	ENSMUST00000067916.13	ENSMUSG00000026173.16	Plcd4	chr1	protein_coding	phospholipase C, delta 4
chr1	74599652;74601382	74601001;74601873	+	74599652	74601873	cassetteExon	0.5	100	100	ENSMUST00000189956.2	ENSMUSG00000026173.16	Plcd4	chr1	protein_coding	phospholipase C, delta 4
chr1	74617446	74624543	-	74617446;74618777	74618484;74624543	ES	0.2	50	50	ENSMUST00000113737.8	ENSMUSG00000026135.18	Zfp142	chr1	protein_coding	zinc finger protein 142
chr1	74618565	74624543	-	74618777	74624543	A3SS	0.2	50	50	ENSMUST00000113737.8	ENSMUSG00000026135.18	Zfp142	chr1	protein_coding	zinc finger protein 142
chr1	74618608	74624543	-	74618777	74624543	A3SS	0.2	50	50	ENSMUST00000113737.8	ENSMUSG00000026135.18	Zfp142	chr1	protein_coding	zinc finger protein 142
chr1	74619086	74624543	-	74618777	74624543	A3SS	0.2	50	50	ENSMUST00000113737.8	ENSMUSG00000026135.18	Zfp142	chr1	protein_coding	zinc finger protein 142
chr1	74624856	74626527	-	74624856	74626723	A5SS	0.5	50	50	ENSMUST00000113737.8	ENSMUSG00000026135.18	Zfp142	chr1	protein_coding	zinc finger protein 142
chr1	74617446	74624543	-	74617446;74619086	74618484;74624543	ES	0.2	50	50	ENSMUST00000027315.14	ENSMUSG00000026135.18	Zfp142	chr1	protein_coding	zinc finger protein 142
chr1	74618565	74624543	-	74619086	74624543	A3SS	0.2	50	50	ENSMUST00000027315.14	ENSMUSG00000026135.18	Zfp142	chr1	protein_coding	zinc finger protein 142
chr1	74618608	74624543	-	74619086	74624543	A3SS	0.2	50	50	ENSMUST00000027315.14	ENSMUSG00000026135.18	Zfp142	chr1	protein_coding	zinc finger protein 142
chr1	74617446;74618565	74618484;74624543	-	74617446	74624543	cassetteExon	0.5	100	100	ENSMUST00000066986.13	ENSMUSG00000026135.18	Zfp142	chr1	protein_coding	zinc finger protein 142
chr1	74617446;74618608	74618484;74624543	-	74617446	74624543	cassetteExon	0.5	100	100	ENSMUST00000066986.13	ENSMUSG00000026135.18	Zfp142	chr1	protein_coding	zinc finger protein 142
chr1	74619086	74624543	-	74617446	74624543	A3SS	0.2	50	50	ENSMUST00000066986.13	ENSMUSG00000026135.18	Zfp142	chr1	protein_coding	zinc finger protein 142
chr1	74626879	74627140	-	74626778	74627140	A3SS	0.33	50	50	ENSMUST00000066986.13	ENSMUSG00000026135.18	Zfp142	chr1	protein_coding	zinc finger protein 142
chr1	74626910	74627140	-	74626778	74627140	A3SS	0.33	50	50	ENSMUST00000066986.13	ENSMUSG00000026135.18	Zfp142	chr1	protein_coding	zinc finger protein 142
chr1	74618565	74624543	-	74618608	74624543	A3SS	0.2	50	50	ENSMUST00000156613.8	ENSMUSG00000026135.18	Zfp142	chr1	protein_coding	zinc finger protein 142
chr1	74626910	74627140	-	74626879	74627140	A3SS	0.33	50	50	ENSMUST00000156613.8	ENSMUSG00000026135.18	Zfp142	chr1	protein_coding	zinc finger protein 142
chr1	74626910	74627084	-	74626910	74627140	A5SS	0.5	50	50	ENSMUST00000136865.8	ENSMUSG00000026135.18	Zfp142	chr1	protein_coding	zinc finger protein 142
chr1	74627646	74628645	+	74627552	74628645	A5SS	0.33	50	50	ENSMUST00000113733.10	ENSMUSG00000026172.13	Bcs1l	chr1	protein_coding	BCS1-like (yeast)
chr1	74627763	74628645	+	74627552	74628645	A5SS	0.33	50	50	ENSMUST00000113733.10	ENSMUSG00000026172.13	Bcs1l	chr1	protein_coding	BCS1-like (yeast)
chr1	74627763	74628645	+	74627646	74628645	A5SS	0.33	50	50	ENSMUST00000027358.11	ENSMUSG00000026172.13	Bcs1l	chr1	protein_coding	BCS1-like (yeast)
chr1	74638299;74639616	74639581;74640484	-	74638299	74640484	cassetteExon	0.5	100	100	ENSMUST00000135140.8	ENSMUSG00000026171.13	Rnf25	chr1	protein_coding	ring finger protein 25
chr1	74634457	74634790	-	74634460	74634790	A3SS	0.5	50	50	ENSMUST00000135140.8	ENSMUSG00000026171.13	Rnf25	chr1	protein_coding	ring finger protein 25
chr1	74637951	74638225	-	74638004	74638225	A3SS	0.5	50	50	ENSMUST00000135140.8	ENSMUSG00000026171.13	Rnf25	chr1	protein_coding	ring finger protein 25
chr1	74638299	74639703	-	74638299	74640484	A5SS	0.33	50	50	ENSMUST00000135140.8	ENSMUSG00000026171.13	Rnf25	chr1	protein_coding	ring finger protein 25
chr1	74638299	74640484	-	74638299	74639581	5pMXE	0.33	50	50	ENSMUST00000127938.8	ENSMUSG00000026171.13	Rnf25	chr1	protein_coding	ring finger protein 25
chr1	74638299	74639703	-	74638299	74639581	A5SS	0.33	50	50	ENSMUST00000127938.8	ENSMUSG00000026171.13	Rnf25	chr1	protein_coding	ring finger protein 25
chr1	74639616	74640392	-	74639616	74640484	A5SS	0.5	50	50	ENSMUST00000136078.2	ENSMUSG00000026171.13	Rnf25	chr1	protein_coding	ring finger protein 25
chr1	74642633	74648171	+	74642633;74644678	74644548;74648171	ES	0.5	50	50	ENSMUST00000087183.11	ENSMUSG00000033276.19	Stk36	chr1	protein_coding	serine/threonine kinase 36
chr1	74650024	74650308	+	74650024	74650248	A3SS	0.5	50	50	ENSMUST00000087183.11	ENSMUSG00000033276.19	Stk36	chr1	protein_coding	serine/threonine kinase 36
chr1	74662541	74662996	+	74662541	74662989	A3SS	0.5	50	50	ENSMUST00000087183.11	ENSMUSG00000033276.19	Stk36	chr1	protein_coding	serine/threonine kinase 36
chr1	74641021	74641188	+	74640772	74641188	A5SS	0.5	50	50	ENSMUST00000087183.11	ENSMUSG00000033276.19	Stk36	chr1	protein_coding	serine/threonine kinase 36
chr1	74662249	74662444	+	74661534	74662444	A5SS	0.5	50	50	ENSMUST00000087183.11	ENSMUSG00000033276.19	Stk36	chr1	protein_coding	serine/threonine kinase 36
chr1	74670819	74671888	+	74670825	74671888	A5SS	0.5	50	50	ENSMUST00000087183.11	ENSMUSG00000033276.19	Stk36	chr1	protein_coding	serine/threonine kinase 36
chr1	74642633	74648171	+	74642633	74644548	3pMXE	0.5	50	50	ENSMUST00000113694.8	ENSMUSG00000033276.19	Stk36	chr1	protein_coding	serine/threonine kinase 36
chr1	74655878	74661355	+	74655878	74664652	A3SS	0.5	50	50	ENSMUST00000087186.11	ENSMUSG00000033276.19	Stk36	chr1	protein_coding	serine/threonine kinase 36
chr1	74663094	74664652	+	74655878	74664652	A5SS	0.5	50	50	ENSMUST00000087186.11	ENSMUSG00000033276.19	Stk36	chr1	protein_coding	serine/threonine kinase 36
chr1	74725552	74726637	+	74725552;74726554	74726363;74726637	ES	0.5	50	50	ENSMUST00000042125.15	ENSMUSG00000033257.15	Ttll4	chr1	protein_coding	tubulin tyrosine ligase-like family, member 4
chr1	74726554	74726882	+	74726554;74726719	74726637;74726882	ES	0.5	50	50	ENSMUST00000042125.15	ENSMUSG00000033257.15	Ttll4	chr1	protein_coding	tubulin tyrosine ligase-like family, member 4
chr1	74735971	74736600	+	74735971;74736408	74736338;74736600	ES	0.5	50	50	ENSMUST00000042125.15	ENSMUSG00000033257.15	Ttll4	chr1	protein_coding	tubulin tyrosine ligase-like family, member 4
chr1	74729265;74730048	74729853;74734867	+	74729265	74734867	cassetteExon	0.5	100	100	ENSMUST00000042125.15	ENSMUSG00000033257.15	Ttll4	chr1	protein_coding	tubulin tyrosine ligase-like family, member 4
chr1	74712169	74719513	+	74712169	74718057	A3SS	0.5	50	50	ENSMUST00000042125.15	ENSMUSG00000033257.15	Ttll4	chr1	protein_coding	tubulin tyrosine ligase-like family, member 4
chr1	74712169	74719513	+	74712169;74718090	74718057;74719513	ES	0.5	50	50	ENSMUST00000141119.8	ENSMUSG00000033257.15	Ttll4	chr1	protein_coding	tubulin tyrosine ligase-like family, member 4
chr1	74725552;74726554	74726363;74726882	+	74725552;74726719	74726637;74726882	MXE	0.5	100	100	ENSMUST00000113678.2	ENSMUSG00000033257.15	Ttll4	chr1	protein_coding	tubulin tyrosine ligase-like family, member 4
chr1	74725552;74726554	74726363;74727323	+	74725552;74727010	74726637;74727323	MXE	0.5	100	100	ENSMUST00000113678.2	ENSMUSG00000033257.15	Ttll4	chr1	protein_coding	tubulin tyrosine ligase-like family, member 4
chr1	74726554	74727323	+	74726554;74727010	74726882;74727323	ES	0.5	50	50	ENSMUST00000143925.8	ENSMUSG00000033257.15	Ttll4	chr1	protein_coding	tubulin tyrosine ligase-like family, member 4
chr1	74726554;74727010	74726637;74727323	+	74726554	74727323	cassetteExon	0.5	100	100	ENSMUST00000140591.2	ENSMUSG00000033257.15	Ttll4	chr1	protein_coding	tubulin tyrosine ligase-like family, member 4
chr1	74784530	74784856	-	74784530;74784755	74784710;74784856	ES	0.5	50	50	ENSMUST00000160732.8	ENSMUSG00000006542.14	Prkag3	chr1	protein_coding	protein kinase, AMP-activated, gamma 3 non-catalytic subunit
chr1	74832784	74842282	+	74832784;74840071	74839692;74842282	ES	0.5	50	50	ENSMUST00000006718.15	ENSMUSG00000026167.15	Wnt10a	chr1	protein_coding	wingless-type MMTV integration site family, member 10A
chr1	74923672	74924318	-	74923640	74924318	A3SS	0.5	50	50	ENSMUST00000068631.4	ENSMUSG00000055197.5	Fev	chr1	protein_coding	FEV transcription factor, ETS family member
chr1	74929832	74930813	-	74929832	74931105	A5SS	0.5	50	50	ENSMUST00000006721.3	ENSMUSG00000006546.4	Cryba2	chr1	protein_coding	crystallin, beta A2
chr1	74931246	74931706	-	74931246	74931886	A5SS	0.5	50	50	ENSMUST00000006721.3	ENSMUSG00000006546.4	Cryba2	chr1	protein_coding	crystallin, beta A2
chr1	74968516	74972229	-	74968516;74971187	74971003;74972229	ES	0.33	50	50	ENSMUST00000094844.4	ENSMUSG00000047021.15	Cfap65	chr1	protein_coding	cilia and flagella associated protein 65
chr1	74961619	74962087	-	74960835	74962087	A3SS	0.5	50	50	ENSMUST00000094844.4	ENSMUSG00000047021.15	Cfap65	chr1	protein_coding	cilia and flagella associated protein 65
chr1	74967659	74972229	-	74967659;74968516	74968414;74972229	ES	0.33	50	50	ENSMUST00000139950.8	ENSMUSG00000047021.15	Cfap65	chr1	protein_coding	cilia and flagella associated protein 65
chr1	74971187	74972229	-	74967659	74972229	A3SS	0.33	50	50	ENSMUST00000130489.2	ENSMUSG00000047021.15	Cfap65	chr1	protein_coding	cilia and flagella associated protein 65
chr1	75118147	75119287	-	75118147	75118702	5pMXE	0.33	50	50	ENSMUST00000168720.8	ENSMUSG00000033159.15	Cnppd1	chr1	protein_coding	cyclin Pas1/PHO80 domain containing 1
chr1	75118147	75118344	-	75118147	75118702	A5SS	0.33	50	50	ENSMUST00000168720.8	ENSMUSG00000033159.15	Cnppd1	chr1	protein_coding	cyclin Pas1/PHO80 domain containing 1
chr1	75118147	75119287	-	75118147;75119204	75118702;75119287	ES	0.5	50	50	ENSMUST00000041213.12	ENSMUSG00000033159.15	Cnppd1	chr1	protein_coding	cyclin Pas1/PHO80 domain containing 1
chr1	75118147	75119287	-	75118147	75118344	5pMXE	0.33	50	50	ENSMUST00000189403.7	ENSMUSG00000033159.15	Cnppd1	chr1	protein_coding	cyclin Pas1/PHO80 domain containing 1
chr1	75119204	75119287	-	75118147	75119287	A3SS	0.5	50	50	ENSMUST00000189809.2	ENSMUSG00000033159.15	Cnppd1	chr1	protein_coding	cyclin Pas1/PHO80 domain containing 1
chr1	75120597	75120948	+	75120597	75121036	A3SS	0.5	50	50	ENSMUST00000188873.7	ENSMUSG00000049339.17	Retreg2	chr1	protein_coding	reticulophagy regulator family member 2
chr1	75121083	75121196	+	75121083	75121266	A3SS	0.5	50	50	ENSMUST00000188873.7	ENSMUSG00000049339.17	Retreg2	chr1	protein_coding	reticulophagy regulator family member 2
chr1	75119920	75120013	+	75119772	75120013	A5SS	0.5	50	50	ENSMUST00000188873.7	ENSMUSG00000049339.17	Retreg2	chr1	protein_coding	reticulophagy regulator family member 2
chr1	75121994	75122324	+	75121997	75122324	A5SS	0.5	50	50	ENSMUST00000188873.7	ENSMUSG00000049339.17	Retreg2	chr1	protein_coding	reticulophagy regulator family member 2
chr1	75145351	75145475	+	75145351	75145478	A3SS	0.5	50	50	ENSMUST00000162768.8	ENSMUSG00000026197.13	Zfand2b	chr1	protein_coding	zinc finger, AN1 type domain 2B
chr1	75145606	75145829	+	75145550	75145829	A5SS	0.5	50	50	ENSMUST00000162768.8	ENSMUSG00000026197.13	Zfand2b	chr1	protein_coding	zinc finger, AN1 type domain 2B
chr1	75147692	75147981	+	75147692	75147880	A3SS	0.5	50	50	ENSMUST00000161106.8	ENSMUSG00000026197.13	Zfand2b	chr1	protein_coding	zinc finger, AN1 type domain 2B
chr1	75149311	75150189	-	75149311;75149609	75149435;75150189	ES	0.5	50	50	ENSMUST00000027396.15	ENSMUSG00000026198.16	Abcb6	chr1	protein_coding	ATP-binding cassette, sub-family B (MDR/TAP), member 6
chr1	75148946	75149435	-	75149311	75149435	A3SS&ES	0.5	50	50	ENSMUST00000027396.15	ENSMUSG00000026198.16	Abcb6	chr1	protein_coding	ATP-binding cassette, sub-family B (MDR/TAP), member 6
chr1	75159760	75161333	-	75159760;75161217	75161100;75161333	ES	0.5	50	50	ENSMUST00000185727.2	ENSMUSG00000099519.2	Gm29253	chr1	lncRNA	predicted gene 29253
chr1	75163830	75164329	-	75163582	75164329	A3SS	0.5	50	50	ENSMUST00000189702.7	ENSMUSG00000033124.17	Atg9a	chr1	protein_coding	autophagy related 9A
chr1	75167524	75168131	-	75167521	75168131	A3SS	0.5	50	50	ENSMUST00000189702.7	ENSMUSG00000033124.17	Atg9a	chr1	protein_coding	autophagy related 9A
chr1	75162489	75162654	-	75162489	75162595	A5SS	0.5	50	50	ENSMUST00000189702.7	ENSMUSG00000033124.17	Atg9a	chr1	protein_coding	autophagy related 9A
chr1	75167521	75168468	-	75167521	75168131	A5SS	0.5	50	50	ENSMUST00000189702.7	ENSMUSG00000033124.17	Atg9a	chr1	protein_coding	autophagy related 9A
chr1	75167524	75168468	-	75167521	75168468	A3SS	0.5	50	50	ENSMUST00000189665.7	ENSMUSG00000033124.17	Atg9a	chr1	protein_coding	autophagy related 9A
chr1	75167524	75168131	-	75167524	75168468	A5SS	0.5	50	50	ENSMUST00000239085.2	ENSMUSG00000033124.17	Atg9a	chr1	protein_coding	autophagy related 9A
chr1	75169321	75171485	+	75170928	75171485	A5SS	0.5	50	50	ENSMUST00000151887.9	ENSMUSG00000026199.18	Ankzf1	chr1	protein_coding	ankyrin repeat and zinc finger domain containing 1
chr1	75169321;75170928	75170822;75171485	+	75169321	75171485	cassetteExon	0.5	100	100	ENSMUST00000134378.9	ENSMUSG00000026199.18	Ankzf1	chr1	protein_coding	ankyrin repeat and zinc finger domain containing 1
chr1	75171900	75172213	+	75171900	75172244	A3SS	0.5	50	50	ENSMUST00000152233.9	ENSMUSG00000026199.18	Ankzf1	chr1	protein_coding	ankyrin repeat and zinc finger domain containing 1
chr1	75175160	75175677	-	75174998	75175677	A3SS	0.5	50	50	ENSMUST00000186148.2	ENSMUSG00000026200.14	Glb1l	chr1	protein_coding	galactosidase, beta 1-like
chr1	75179110	75179491	-	75179110;75179393	75179219;75179491	ES	0.5	50	50	ENSMUST00000155716.8	ENSMUSG00000026200.14	Glb1l	chr1	protein_coding	galactosidase, beta 1-like
chr1	75186147	75187402	-	75186147	75187235	A5SS	0.5	50	50	ENSMUST00000155716.8	ENSMUSG00000026200.14	Glb1l	chr1	protein_coding	galactosidase, beta 1-like
chr1	75179110	75184963	-	75179110	75179491	5pMXE	0.33	50	50	ENSMUST00000189663.7	ENSMUSG00000026200.14	Glb1l	chr1	protein_coding	galactosidase, beta 1-like
chr1	75179110;75179585	75179219;75184963	-	75179110	75184963	cassetteExon	0.5	100	100	ENSMUST00000186173.7	ENSMUSG00000026200.14	Glb1l	chr1	protein_coding	galactosidase, beta 1-like
chr1	75179110;75179585	75179491;75184963	-	75179110	75184963	cassetteExon	0.5	100	100	ENSMUST00000186173.7	ENSMUSG00000026200.14	Glb1l	chr1	protein_coding	galactosidase, beta 1-like
chr1	75179110	75179491	-	75179393	75179491	3pMXE	0.5	50	50	ENSMUST00000185448.2	ENSMUSG00000026200.14	Glb1l	chr1	protein_coding	galactosidase, beta 1-like
chr1	75189377	75189698	+	75189377	75189530	A3SS&ES	0.5	50	50	ENSMUST00000027401.11	ENSMUSG00000026201.13	Stk16	chr1	protein_coding	serine/threonine kinase 16
chr1	75189650	75189757	+	75189650	75189777	A3SS	0.5	50	50	ENSMUST00000027401.11	ENSMUSG00000026201.13	Stk16	chr1	protein_coding	serine/threonine kinase 16
chr1	75187643	75187884	+	75187696	75187884	A5SS	0.25	50	50	ENSMUST00000027401.11	ENSMUSG00000026201.13	Stk16	chr1	protein_coding	serine/threonine kinase 16
chr1	75187668	75187884	+	75187696	75187884	A5SS	0.25	50	50	ENSMUST00000027401.11	ENSMUSG00000026201.13	Stk16	chr1	protein_coding	serine/threonine kinase 16
chr1	75187802	75187884	+	75187696	75187884	A5SS	0.25	50	50	ENSMUST00000027401.11	ENSMUSG00000026201.13	Stk16	chr1	protein_coding	serine/threonine kinase 16
chr1	75188058	75189530	+	75188058	75188569	3pMXE	0.5	50	50	ENSMUST00000144355.8	ENSMUSG00000026201.13	Stk16	chr1	protein_coding	serine/threonine kinase 16
chr1	75187643	75187884	+	75187668	75187884	A5SS	0.25	50	50	ENSMUST00000123825.8	ENSMUSG00000026201.13	Stk16	chr1	protein_coding	serine/threonine kinase 16
chr1	75187802	75187884	+	75187668	75187884	A5SS	0.25	50	50	ENSMUST00000123825.8	ENSMUSG00000026201.13	Stk16	chr1	protein_coding	serine/threonine kinase 16
chr1	75187802	75187884	+	75187643	75187884	A5SS	0.25	50	50	ENSMUST00000135484.8	ENSMUSG00000026201.13	Stk16	chr1	protein_coding	serine/threonine kinase 16
chr1	75189377	75189530	+	75188058	75189530	A5SS	0.5	50	50	ENSMUST00000188460.3	ENSMUSG00000026201.13	Stk16	chr1	protein_coding	serine/threonine kinase 16
chr1	75193237	75193856	-	75193237;75193619	75193471;75193856	ES	0.5	50	50	ENSMUST00000186213.7	ENSMUSG00000026202.14	Tuba4a	chr1	protein_coding	tubulin, alpha 4A
chr1	75194078	75196070	-	75194078	75195837	5pMXE	0.2	50	50	ENSMUST00000186213.7	ENSMUSG00000026202.14	Tuba4a	chr1	protein_coding	tubulin, alpha 4A
chr1	75193092	75193471	-	75193237	75193471	A3SS	0.5	50	50	ENSMUST00000186213.7	ENSMUSG00000026202.14	Tuba4a	chr1	protein_coding	tubulin, alpha 4A
chr1	75194078	75195180	-	75194078	75195837	A5SS	0.2	50	50	ENSMUST00000186213.7	ENSMUSG00000026202.14	Tuba4a	chr1	protein_coding	tubulin, alpha 4A
chr1	75194078	75195434	-	75194078	75195837	A5SS	0.2	50	50	ENSMUST00000186213.7	ENSMUSG00000026202.14	Tuba4a	chr1	protein_coding	tubulin, alpha 4A
chr1	75194078	75195473	-	75194078	75195837	A5SS	0.2	50	50	ENSMUST00000186213.7	ENSMUSG00000026202.14	Tuba4a	chr1	protein_coding	tubulin, alpha 4A
chr1	75194078	75195434	-	75194078	75195180	5pMXE	0.2	50	50	ENSMUST00000079464.13	ENSMUSG00000026202.14	Tuba4a	chr1	protein_coding	tubulin, alpha 4A
chr1	75194078	75195473	-	75194078	75195180	5pMXE	0.2	50	50	ENSMUST00000079464.13	ENSMUSG00000026202.14	Tuba4a	chr1	protein_coding	tubulin, alpha 4A
chr1	75194078	75196070	-	75194078	75195180	5pMXE	0.2	50	50	ENSMUST00000079464.13	ENSMUSG00000026202.14	Tuba4a	chr1	protein_coding	tubulin, alpha 4A
chr1	75193237	75193856	-	75193619	75193856	A3SS&ES	0.5	50	50	ENSMUST00000186971.2	ENSMUSG00000026202.14	Tuba4a	chr1	protein_coding	tubulin, alpha 4A
chr1	75194078	75195434	-	75194078	75196070	A5SS	0.2	50	50	ENSMUST00000186758.7	ENSMUSG00000026202.14	Tuba4a	chr1	protein_coding	tubulin, alpha 4A
chr1	75194078	75195473	-	75194078	75196070	A5SS	0.2	50	50	ENSMUST00000186758.7	ENSMUSG00000026202.14	Tuba4a	chr1	protein_coding	tubulin, alpha 4A
chr1	75194078	75195473	-	75194078	75195434	A5SS	0.2	50	50	ENSMUST00000190717.7	ENSMUSG00000026202.14	Tuba4a	chr1	protein_coding	tubulin, alpha 4A
chr1	75200074	75208619	-	75200074	75200267	5pMXE	0.5	50	50	ENSMUST00000179573.2	ENSMUSG00000096094.3	A630095N17Rik	chr1	protein_coding	RIKEN cDNA A630095N17 gene
chr1	75208120	75208619	-	75200074	75208619	A3SS	0.5	50	50	ENSMUST00000180101.3	ENSMUSG00000096094.3	A630095N17Rik	chr1	protein_coding	RIKEN cDNA A630095N17 gene
chr1	75214208	75216152	+	75214208;75215977	75215924;75216152	ES	0.5	50	50	ENSMUST00000188931.7	ENSMUSG00000026203.17	Dnajb2	chr1	protein_coding	DnaJ heat shock protein family (Hsp40) member B2
chr1	75214208	75215752	+	75214208	75215924	A3SS	0.33	50	50	ENSMUST00000188931.7	ENSMUSG00000026203.17	Dnajb2	chr1	protein_coding	DnaJ heat shock protein family (Hsp40) member B2
chr1	75213181	75213496	+	75213233	75213496	A5SS	0.5	50	50	ENSMUST00000188931.7	ENSMUSG00000026203.17	Dnajb2	chr1	protein_coding	DnaJ heat shock protein family (Hsp40) member B2
chr1	75213988	75214099	+	75213592	75214099	A5SS	0.5	50	50	ENSMUST00000188931.7	ENSMUSG00000026203.17	Dnajb2	chr1	protein_coding	DnaJ heat shock protein family (Hsp40) member B2
chr1	75214208;75215977	75215752;75216152	+	75214208	75216152	cassetteExon	0.5	100	100	ENSMUST00000055223.14	ENSMUSG00000026203.17	Dnajb2	chr1	protein_coding	DnaJ heat shock protein family (Hsp40) member B2
chr1	75220305;75221234	75221079;75221438	+	75220305	75221438	cassetteExon	0.5	100	100	ENSMUST00000055223.14	ENSMUSG00000026203.17	Dnajb2	chr1	protein_coding	DnaJ heat shock protein family (Hsp40) member B2
chr1	75214208	75216152	+	75214208	75215924	3pMXE	0.33	50	50	ENSMUST00000185654.3	ENSMUSG00000026203.17	Dnajb2	chr1	protein_coding	DnaJ heat shock protein family (Hsp40) member B2
chr1	75235281	75238671	-	75235281;75237311	75237215;75238671	ES	0.5	50	50	ENSMUST00000027404.12	ENSMUSG00000026204.16	Ptprn	chr1	protein_coding	protein tyrosine phosphatase, receptor type, N
chr1	75239017	75241078	-	75239017	75240648	5pMXE	0.25	50	50	ENSMUST00000027404.12	ENSMUSG00000026204.16	Ptprn	chr1	protein_coding	protein tyrosine phosphatase, receptor type, N
chr1	75239017	75240502	-	75239017	75240648	A5SS	0.25	50	50	ENSMUST00000027404.12	ENSMUSG00000026204.16	Ptprn	chr1	protein_coding	protein tyrosine phosphatase, receptor type, N
chr1	75239017	75240592	-	75239017	75240648	A5SS	0.25	50	50	ENSMUST00000027404.12	ENSMUSG00000026204.16	Ptprn	chr1	protein_coding	protein tyrosine phosphatase, receptor type, N
chr1	75239017	75240592	-	75239017	75240502	5pMXE	0.25	50	50	ENSMUST00000186178.7	ENSMUSG00000026204.16	Ptprn	chr1	protein_coding	protein tyrosine phosphatase, receptor type, N
chr1	75239017	75241078	-	75239017	75240502	5pMXE	0.25	50	50	ENSMUST00000186178.7	ENSMUSG00000026204.16	Ptprn	chr1	protein_coding	protein tyrosine phosphatase, receptor type, N
chr1	75239017	75241078	-	75239017	75240592	5pMXE	0.25	50	50	ENSMUST00000189769.7	ENSMUSG00000026204.16	Ptprn	chr1	protein_coding	protein tyrosine phosphatase, receptor type, N
chr1	75250690	75251041	-	75250690;75250854	75250812;75251041	ES	0.5	50	50	ENSMUST00000039534.11	ENSMUSG00000033061.16	Resp18	chr1	protein_coding	regulated endocrine-specific protein 18
chr1	75250690	75251041	-	75250690	75250812	5pMXE	0.5	50	50	ENSMUST00000191283.2	ENSMUSG00000033061.16	Resp18	chr1	protein_coding	regulated endocrine-specific protein 18
chr1	75292714	75293185	-	75292714;75293087	75292974;75293185	ES	0.5	50	50	ENSMUST00000066668.14	ENSMUSG00000026209.16	Dnpep	chr1	protein_coding	aspartyl aminopeptidase
chr1	75293447	75294501	-	75293447	75293979	5pMXE	0.2	50	50	ENSMUST00000066668.14	ENSMUSG00000026209.16	Dnpep	chr1	protein_coding	aspartyl aminopeptidase
chr1	75293447	75293535	-	75293447	75293979	A5SS	0.2	50	50	ENSMUST00000066668.14	ENSMUSG00000026209.16	Dnpep	chr1	protein_coding	aspartyl aminopeptidase
chr1	75293447	75293726	-	75293447	75293979	A5SS	0.2	50	50	ENSMUST00000066668.14	ENSMUSG00000026209.16	Dnpep	chr1	protein_coding	aspartyl aminopeptidase
chr1	75293447	75293789	-	75293447	75293979	A5SS	0.2	50	50	ENSMUST00000066668.14	ENSMUSG00000026209.16	Dnpep	chr1	protein_coding	aspartyl aminopeptidase
chr1	75293447	75293726	-	75293447	75293535	5pMXE	0.2	50	50	ENSMUST00000185419.7	ENSMUSG00000026209.16	Dnpep	chr1	protein_coding	aspartyl aminopeptidase
chr1	75293447	75293789	-	75293447	75293535	5pMXE	0.2	50	50	ENSMUST00000185419.7	ENSMUSG00000026209.16	Dnpep	chr1	protein_coding	aspartyl aminopeptidase
chr1	75293447	75294501	-	75293447	75293535	5pMXE	0.2	50	50	ENSMUST00000185419.7	ENSMUSG00000026209.16	Dnpep	chr1	protein_coding	aspartyl aminopeptidase
chr1	75291085;75292064	75291774;75292263	-	75291085	75292263	cassetteExon	0.5	100	100	ENSMUST00000189551.7	ENSMUSG00000026209.16	Dnpep	chr1	protein_coding	aspartyl aminopeptidase
chr1	75293447	75294501	-	75293447	75293726	5pMXE	0.2	50	50	ENSMUST00000187075.7	ENSMUSG00000026209.16	Dnpep	chr1	protein_coding	aspartyl aminopeptidase
chr1	75293447	75293789	-	75293447	75293726	A5SS	0.2	50	50	ENSMUST00000187075.7	ENSMUSG00000026209.16	Dnpep	chr1	protein_coding	aspartyl aminopeptidase
chr1	75292714	75293185	-	75293087	75293185	3pMXE	0.5	50	50	ENSMUST00000190005.2	ENSMUSG00000026209.16	Dnpep	chr1	protein_coding	aspartyl aminopeptidase
chr1	75293447	75293789	-	75293447	75294501	A5SS	0.2	50	50	ENSMUST00000188652.7	ENSMUSG00000026209.16	Dnpep	chr1	protein_coding	aspartyl aminopeptidase
chr1	75346592	75346900	-	75346592	75350025	A5SS	0.5	50	50	ENSMUST00000152799.8	ENSMUSG00000085653.8	Gm15179	chr1	lncRNA	predicted gene 15179
chr1	75361808	75367623	+	75361808;75365748	75364442;75367623	ES	0.5	50	50	ENSMUST00000087122.12	ENSMUSG00000026207.17	Speg	chr1	protein_coding	SPEG complex locus
chr1	75379117	75380421	+	75379117	75381531	A3SS	0.5	50	50	ENSMUST00000087122.12	ENSMUSG00000026207.17	Speg	chr1	protein_coding	SPEG complex locus
chr1	75359823	75361300	+	75352477	75361300	A5SS	0.25	50	50	ENSMUST00000087122.12	ENSMUSG00000026207.17	Speg	chr1	protein_coding	SPEG complex locus
chr1	75360307	75361300	+	75352477	75361300	A5SS	0.25	50	50	ENSMUST00000087122.12	ENSMUSG00000026207.17	Speg	chr1	protein_coding	SPEG complex locus
chr1	75360712	75361300	+	75352477	75361300	A5SS	0.25	50	50	ENSMUST00000087122.12	ENSMUSG00000026207.17	Speg	chr1	protein_coding	SPEG complex locus
chr1	75361631	75364442	+	75361808	75364442	A5SS	0.33	50	50	ENSMUST00000087122.12	ENSMUSG00000026207.17	Speg	chr1	protein_coding	SPEG complex locus
chr1	75362320	75364442	+	75361808	75364442	A5SS	0.33	50	50	ENSMUST00000087122.12	ENSMUSG00000026207.17	Speg	chr1	protein_coding	SPEG complex locus
chr1	75376906	75377699	+	75368588	75377699	A5SS	0.25	50	50	ENSMUST00000087122.12	ENSMUSG00000026207.17	Speg	chr1	protein_coding	SPEG complex locus
chr1	75377207	75377699	+	75368588	75377699	A5SS	0.25	50	50	ENSMUST00000087122.12	ENSMUSG00000026207.17	Speg	chr1	protein_coding	SPEG complex locus
chr1	75377305	75377699	+	75368588	75377699	A5SS	0.25	50	50	ENSMUST00000087122.12	ENSMUSG00000026207.17	Speg	chr1	protein_coding	SPEG complex locus
chr1	75359823	75361300	+	75359823;75360712	75360683;75361300	ES	0.33	50	50	ENSMUST00000148515.8	ENSMUSG00000026207.17	Speg	chr1	protein_coding	SPEG complex locus
chr1	75359823	75360678	+	75359823	75360683	A3SS	0.33	50	50	ENSMUST00000148515.8	ENSMUSG00000026207.17	Speg	chr1	protein_coding	SPEG complex locus
chr1	75360307	75361300	+	75360712	75361300	A5SS&ES	0.33	50	50	ENSMUST00000148515.8	ENSMUSG00000026207.17	Speg	chr1	protein_coding	SPEG complex locus
chr1	75362320	75364442	+	75361631	75364442	A5SS	0.33	50	50	ENSMUST00000148515.8	ENSMUSG00000026207.17	Speg	chr1	protein_coding	SPEG complex locus
chr1	75359823;75360712	75360678;75361300	+	75359823	75361300	cassetteExon	0.5	100	100	ENSMUST00000113590.8	ENSMUSG00000026207.17	Speg	chr1	protein_coding	SPEG complex locus
chr1	75360307	75361300	+	75359823	75361300	A5SS	0.33	50	50	ENSMUST00000113590.8	ENSMUSG00000026207.17	Speg	chr1	protein_coding	SPEG complex locus
chr1	75361808	75367623	+	75361808	75364442	3pMXE	0.5	50	50	ENSMUST00000125118.2	ENSMUSG00000026207.17	Speg	chr1	protein_coding	SPEG complex locus
chr1	75365748	75367623	+	75361808	75367623	A5SS	0.5	50	50	ENSMUST00000132228.2	ENSMUSG00000026207.17	Speg	chr1	protein_coding	SPEG complex locus
chr1	75362320	75364445	+	75362320	75364442	A3SS	0.5	50	50	ENSMUST00000132222.2	ENSMUSG00000026207.17	Speg	chr1	protein_coding	SPEG complex locus
chr1	75377207	75377699	+	75376906	75377699	A5SS	0.25	50	50	ENSMUST00000113589.8	ENSMUSG00000026207.17	Speg	chr1	protein_coding	SPEG complex locus
chr1	75377305	75377699	+	75376906	75377699	A5SS	0.25	50	50	ENSMUST00000113589.8	ENSMUSG00000026207.17	Speg	chr1	protein_coding	SPEG complex locus
chr1	75377305	75377699	+	75377207	75377699	A5SS	0.25	50	50	ENSMUST00000113588.8	ENSMUSG00000026207.17	Speg	chr1	protein_coding	SPEG complex locus
chr1	75412655;75412837	75412759;75413422	+	75412655	75413422	cassetteExon	0.5	100	100	ENSMUST00000037796.14	ENSMUSG00000033021.17	Gmppa	chr1	protein_coding	GDP-mannose pyrophosphorylase A
chr1	75412655;75412956	75412759;75413422	+	75412655	75413422	cassetteExon	0.5	100	100	ENSMUST00000037796.14	ENSMUSG00000033021.17	Gmppa	chr1	protein_coding	GDP-mannose pyrophosphorylase A
chr1	75412655;75412837	75412790;75413422	+	75412655	75413422	cassetteExon	0.5	100	100	ENSMUST00000037796.14	ENSMUSG00000033021.17	Gmppa	chr1	protein_coding	GDP-mannose pyrophosphorylase A
chr1	75412655;75412956	75412790;75413422	+	75412655	75413422	cassetteExon	0.5	100	100	ENSMUST00000037796.14	ENSMUSG00000033021.17	Gmppa	chr1	protein_coding	GDP-mannose pyrophosphorylase A
chr1	75412655	75413428	+	75412655	75413422	A3SS	0.2	50	50	ENSMUST00000037796.14	ENSMUSG00000033021.17	Gmppa	chr1	protein_coding	GDP-mannose pyrophosphorylase A
chr1	75412655	75413638	+	75412655	75413422	A3SS&ES	0.2	50	50	ENSMUST00000037796.14	ENSMUSG00000033021.17	Gmppa	chr1	protein_coding	GDP-mannose pyrophosphorylase A
chr1	75416048	75417132	+	75416048	75417056	A3SS	0.5	50	50	ENSMUST00000037796.14	ENSMUSG00000033021.17	Gmppa	chr1	protein_coding	GDP-mannose pyrophosphorylase A
chr1	75412655	75412759	+	75412655	75412790	A3SS	0.2	50	50	ENSMUST00000113584.8	ENSMUSG00000033021.17	Gmppa	chr1	protein_coding	GDP-mannose pyrophosphorylase A
chr1	75412655	75413428	+	75412655	75412790	A3SS&ES	0.2	50	50	ENSMUST00000113584.8	ENSMUSG00000033021.17	Gmppa	chr1	protein_coding	GDP-mannose pyrophosphorylase A
chr1	75412655	75413638	+	75412655	75412790	A3SS&ES	0.2	50	50	ENSMUST00000113584.8	ENSMUSG00000033021.17	Gmppa	chr1	protein_coding	GDP-mannose pyrophosphorylase A
chr1	75412956	75413428	+	75412956	75413422	A3SS	0.5	50	50	ENSMUST00000113584.8	ENSMUSG00000033021.17	Gmppa	chr1	protein_coding	GDP-mannose pyrophosphorylase A
chr1	75412837	75413422	+	75412956	75413422	A5SS	0.33	50	50	ENSMUST00000113584.8	ENSMUSG00000033021.17	Gmppa	chr1	protein_coding	GDP-mannose pyrophosphorylase A
chr1	75412655	75413422	+	75412956	75413422	A5SS	0.33	50	50	ENSMUST00000145166.8	ENSMUSG00000033021.17	Gmppa	chr1	protein_coding	GDP-mannose pyrophosphorylase A
chr1	75412655;75412956	75412759;75413428	+	75412655	75413428	cassetteExon	0.5	100	100	ENSMUST00000143730.8	ENSMUSG00000033021.17	Gmppa	chr1	protein_coding	GDP-mannose pyrophosphorylase A
chr1	75412655;75413089	75412759;75413428	+	75412655	75413428	cassetteExon	0.5	100	100	ENSMUST00000143730.8	ENSMUSG00000033021.17	Gmppa	chr1	protein_coding	GDP-mannose pyrophosphorylase A
chr1	75412655;75412956	75412790;75413428	+	75412655	75413428	cassetteExon	0.5	100	100	ENSMUST00000143730.8	ENSMUSG00000033021.17	Gmppa	chr1	protein_coding	GDP-mannose pyrophosphorylase A
chr1	75412655;75413089	75412790;75413428	+	75412655	75413428	cassetteExon	0.5	100	100	ENSMUST00000143730.8	ENSMUSG00000033021.17	Gmppa	chr1	protein_coding	GDP-mannose pyrophosphorylase A
chr1	75412655	75413638	+	75412655	75413428	A3SS&ES	0.2	50	50	ENSMUST00000143730.8	ENSMUSG00000033021.17	Gmppa	chr1	protein_coding	GDP-mannose pyrophosphorylase A
chr1	75412655	75413422	+	75412655	75412759	A3SS&ES	0.2	50	50	ENSMUST00000133418.8	ENSMUSG00000033021.17	Gmppa	chr1	protein_coding	GDP-mannose pyrophosphorylase A
chr1	75412655	75413638	+	75412655	75412759	A3SS&ES	0.2	50	50	ENSMUST00000133418.8	ENSMUSG00000033021.17	Gmppa	chr1	protein_coding	GDP-mannose pyrophosphorylase A
chr1	75413089	75413428	+	75412956	75413428	A5SS	0.33	50	50	ENSMUST00000133418.8	ENSMUSG00000033021.17	Gmppa	chr1	protein_coding	GDP-mannose pyrophosphorylase A
chr1	75412655	75413428	+	75412956	75413428	A5SS	0.33	50	50	ENSMUST00000140287.8	ENSMUSG00000033021.17	Gmppa	chr1	protein_coding	GDP-mannose pyrophosphorylase A
chr1	75412655	75413422	+	75412837	75413422	5pMXE	0.33	50	50	ENSMUST00000131545.8	ENSMUSG00000033021.17	Gmppa	chr1	protein_coding	GDP-mannose pyrophosphorylase A
chr1	75412655	75413428	+	75413089	75413428	5pMXE	0.33	50	50	ENSMUST00000141124.2	ENSMUSG00000033021.17	Gmppa	chr1	protein_coding	GDP-mannose pyrophosphorylase A
chr1	75446477;75446979	75446923;75448928	+	75446477	75448928	cassetteExon	0.5	100	100	ENSMUST00000113577.8	ENSMUSG00000033007.16	Asic4	chr1	protein_coding	acid-sensing (proton-gated) ion channel family member 4
chr1	75454462;75455056	75454914;75455436	-	75454462	75455436	cassetteExon	0.5	100	100	ENSMUST00000079205.14	ENSMUSG00000032997.17	Chpf	chr1	protein_coding	chondroitin polymerizing factor
chr1	75454184	75455436	-	75454462	75455436	A3SS	0.33	50	50	ENSMUST00000079205.14	ENSMUSG00000032997.17	Chpf	chr1	protein_coding	chondroitin polymerizing factor
chr1	75454184	75454914	-	75454462	75454914	A3SS	0.5	50	50	ENSMUST00000094818.4	ENSMUSG00000032997.17	Chpf	chr1	protein_coding	chondroitin polymerizing factor
chr1	75454184	75455436	-	75455056	75455436	A3SS&ES	0.33	50	50	ENSMUST00000094818.4	ENSMUSG00000032997.17	Chpf	chr1	protein_coding	chondroitin polymerizing factor
chr1	75454184;75455056	75454914;75455436	-	75454184	75455436	cassetteExon	0.5	100	100	ENSMUST00000138683.2	ENSMUSG00000032997.17	Chpf	chr1	protein_coding	chondroitin polymerizing factor
chr1	75454462	75455436	-	75455056	75455436	A3SS&ES	0.33	50	50	ENSMUST00000124042.2	ENSMUSG00000032997.17	Chpf	chr1	protein_coding	chondroitin polymerizing factor
chr1	75462603	75463284	-	75456015	75463284	A3SS	0.5	50	50	ENSMUST00000156499.3	ENSMUSG00000026211.19	Obsl1	chr1	protein_coding	obscurin-like 1
chr1	75468101;75468986	75468711;75469150	-	75468101	75469150	cassetteExon	0.5	100	100	ENSMUST00000113567.10	ENSMUSG00000026211.19	Obsl1	chr1	protein_coding	obscurin-like 1
chr1	75468101;75468986	75468872;75469150	-	75468101	75469150	cassetteExon	0.5	100	100	ENSMUST00000113567.10	ENSMUSG00000026211.19	Obsl1	chr1	protein_coding	obscurin-like 1
chr1	75473268	75473652	-	75470701	75473652	A3SS	0.5	50	50	ENSMUST00000113567.10	ENSMUSG00000026211.19	Obsl1	chr1	protein_coding	obscurin-like 1
chr1	75468101	75468872	-	75468101	75468711	A5SS	0.33	50	50	ENSMUST00000132252.2	ENSMUSG00000026211.19	Obsl1	chr1	protein_coding	obscurin-like 1
chr1	75456529	75456909	+	75456529	75456837	A3SS	0.5	50	50	ENSMUST00000113575.9	ENSMUSG00000051703.15	Tmem198	chr1	protein_coding	transmembrane protein 198
chr1	75456973	75459213	+	75457041	75459213	A5SS	0.5	50	50	ENSMUST00000113575.9	ENSMUSG00000051703.15	Tmem198	chr1	protein_coding	transmembrane protein 198
chr1	75501587	75501732	+	75501532	75501732	A5SS	0.5	50	50	ENSMUST00000027414.16	ENSMUSG00000026213.16	Stk11ip	chr1	protein_coding	serine/threonine kinase 11 interacting protein
chr1	75509981	75510204	+	75509374	75510204	A5SS	0.5	50	50	ENSMUST00000027414.16	ENSMUSG00000026213.16	Stk11ip	chr1	protein_coding	serine/threonine kinase 11 interacting protein
chr1	75528896	75529900	+	75528896;75529451	75529267;75529900	ES	0.5	50	50	ENSMUST00000124341.8	ENSMUSG00000006576.17	Slc4a3	chr1	protein_coding	solute carrier family 4 (anion exchanger), member 3
chr1	75523026	75523459	+	75523026	75523416	A3SS	0.5	50	50	ENSMUST00000124341.8	ENSMUSG00000006576.17	Slc4a3	chr1	protein_coding	solute carrier family 4 (anion exchanger), member 3
chr1	75528464	75528772	+	75528464	75528797	A3SS	0.33	50	50	ENSMUST00000124341.8	ENSMUSG00000006576.17	Slc4a3	chr1	protein_coding	solute carrier family 4 (anion exchanger), member 3
chr1	75528464	75528783	+	75528464	75528797	A3SS	0.33	50	50	ENSMUST00000124341.8	ENSMUSG00000006576.17	Slc4a3	chr1	protein_coding	solute carrier family 4 (anion exchanger), member 3
chr1	75523257	75523416	+	75523026	75523416	A5SS	0.5	50	50	ENSMUST00000124341.8	ENSMUSG00000006576.17	Slc4a3	chr1	protein_coding	solute carrier family 4 (anion exchanger), member 3
chr1	75526697	75527148	+	75525709	75527148	A5SS	0.5	50	50	ENSMUST00000124341.8	ENSMUSG00000006576.17	Slc4a3	chr1	protein_coding	solute carrier family 4 (anion exchanger), member 3
chr1	75523257	75523459	+	75523026	75523459	A5SS	0.5	50	50	ENSMUST00000129703.8	ENSMUSG00000006576.17	Slc4a3	chr1	protein_coding	solute carrier family 4 (anion exchanger), member 3
chr1	75523257	75523459	+	75523257	75523416	A3SS	0.5	50	50	ENSMUST00000150142.8	ENSMUSG00000006576.17	Slc4a3	chr1	protein_coding	solute carrier family 4 (anion exchanger), member 3
chr1	75528464	75528783	+	75528464	75528772	A3SS	0.33	50	50	ENSMUST00000027415.12	ENSMUSG00000006576.17	Slc4a3	chr1	protein_coding	solute carrier family 4 (anion exchanger), member 3
chr1	76474236	76476969	+	76474420	76476969	A5SS	0.5	50	50	ENSMUST00000190362.7	ENSMUSG00000100553.7	Gm17751	chr1	lncRNA	predicted gene, 17751
chr1	77483848	77491578	-	77483848;77488387	77488320;77491578	ES	0.33	50	50	ENSMUST00000027451.13	ENSMUSG00000026235.15	Epha4	chr1	protein_coding	Eph receptor A4
chr1	77350484	77351379	-	77350484	77351408	A5SS	0.5	50	50	ENSMUST00000027451.13	ENSMUSG00000026235.15	Epha4	chr1	protein_coding	Eph receptor A4
chr1	77483848	77491578	-	77403526	77491578	A3SS	0.33	50	50	ENSMUST00000186930.2	ENSMUSG00000026235.15	Epha4	chr1	protein_coding	Eph receptor A4
chr1	77488387	77491578	-	77403526	77491578	A3SS	0.33	50	50	ENSMUST00000186930.2	ENSMUSG00000026235.15	Epha4	chr1	protein_coding	Eph receptor A4
chr1	77403526	77421502	-	77403526	77491578	A5SS	0.5	50	50	ENSMUST00000186930.2	ENSMUSG00000026235.15	Epha4	chr1	protein_coding	Eph receptor A4
chr1	78162413	78169079	-	78109070	78169079	A3SS	0.5	50	50	ENSMUST00000004994.16	ENSMUSG00000004872.16	Pax3	chr1	protein_coding	paired box 3
chr1	78449271	78454830	-	78449271;78452942	78452827;78454830	ES	0.5	50	50	ENSMUST00000170217.8	ENSMUSG00000026245.17	Farsb	chr1	protein_coding	phenylalanyl-tRNA synthetase, beta subunit
chr1	78456748	78465422	-	78456748;78459000	78458945;78465422	ES	0.33	50	50	ENSMUST00000170217.8	ENSMUSG00000026245.17	Farsb	chr1	protein_coding	phenylalanyl-tRNA synthetase, beta subunit
chr1	78459000;78460019	78459921;78465422	-	78459000	78465422	cassetteExon	0.5	100	100	ENSMUST00000170217.8	ENSMUSG00000026245.17	Farsb	chr1	protein_coding	phenylalanyl-tRNA synthetase, beta subunit
chr1	78456650	78458945	-	78456748	78458945	A3SS	0.5	50	50	ENSMUST00000170217.8	ENSMUSG00000026245.17	Farsb	chr1	protein_coding	phenylalanyl-tRNA synthetase, beta subunit
chr1	78456748	78465422	-	78459000	78465422	A3SS&ES	0.33	50	50	ENSMUST00000189529.7	ENSMUSG00000026245.17	Farsb	chr1	protein_coding	phenylalanyl-tRNA synthetase, beta subunit
chr1	78460019	78465422	-	78456748	78465422	A3SS	0.33	50	50	ENSMUST00000188247.7	ENSMUSG00000026245.17	Farsb	chr1	protein_coding	phenylalanyl-tRNA synthetase, beta subunit
chr1	78476422	78476816	-	78476422	78488493	A5SS	0.5	50	50	ENSMUST00000170511.3	ENSMUSG00000090486.3	BC035947	chr1	protein_coding	cDNA sequence BC035947
chr1	78487858	78488505	+	78487725	78488505	A5SS	0.5	50	50	ENSMUST00000134947.8	ENSMUSG00000012187.14	Mogat1	chr1	protein_coding	monoacylglycerol O-acyltransferase 1
chr1	78487858	78488505	+	78487858	78499327	A3SS	0.5	50	50	ENSMUST00000149732.8	ENSMUSG00000012187.14	Mogat1	chr1	protein_coding	monoacylglycerol O-acyltransferase 1
chr1	78514429	78514581	+	78505889	78514581	A5SS	0.5	50	50	ENSMUST00000113524.8	ENSMUSG00000012187.14	Mogat1	chr1	protein_coding	monoacylglycerol O-acyltransferase 1
chr1	78635820	78659310	+	78635820;78640997	78640858;78659310	ES	0.33	50	50	ENSMUST00000035779.15	ENSMUSG00000032883.16	Acsl3	chr1	protein_coding	acyl-CoA synthetase long-chain family member 3
chr1	78640997	78642043	+	78640997	78659310	A3SS	0.5	50	50	ENSMUST00000035779.15	ENSMUSG00000032883.16	Acsl3	chr1	protein_coding	acyl-CoA synthetase long-chain family member 3
chr1	78638107	78640858	+	78635820	78640858	A5SS	0.5	50	50	ENSMUST00000035779.15	ENSMUSG00000032883.16	Acsl3	chr1	protein_coding	acyl-CoA synthetase long-chain family member 3
chr1	78648647	78659310	+	78640997	78659310	A5SS	0.33	50	50	ENSMUST00000035779.15	ENSMUSG00000032883.16	Acsl3	chr1	protein_coding	acyl-CoA synthetase long-chain family member 3
chr1	78635820;78659727	78659310;78665954	+	78635820	78665954	cassetteExon	0.5	100	100	ENSMUST00000134566.8	ENSMUSG00000032883.16	Acsl3	chr1	protein_coding	acyl-CoA synthetase long-chain family member 3
chr1	78635820	78640858	+	78635820	78665954	A3SS	0.33	50	50	ENSMUST00000134566.8	ENSMUSG00000032883.16	Acsl3	chr1	protein_coding	acyl-CoA synthetase long-chain family member 3
chr1	78648647	78659310	+	78635820	78659310	A5SS	0.33	50	50	ENSMUST00000142704.8	ENSMUSG00000032883.16	Acsl3	chr1	protein_coding	acyl-CoA synthetase long-chain family member 3
chr1	78635820	78665954	+	78659727	78665954	5pMXE	0.5	50	50	ENSMUST00000132997.2	ENSMUSG00000032883.16	Acsl3	chr1	protein_coding	acyl-CoA synthetase long-chain family member 3
chr1	79592057	79602824	-	79592057;79601507	79601399;79602824	ES	0.5	50	50	ENSMUST00000162342.8	ENSMUSG00000054702.15	Ap1s3	chr1	protein_coding	adaptor-related protein complex AP-1, sigma 3
chr1	79601507	79602822	-	79601507	79602824	A5SS	0.5	50	50	ENSMUST00000162342.8	ENSMUSG00000054702.15	Ap1s3	chr1	protein_coding	adaptor-related protein complex AP-1, sigma 3
chr1	79592057	79602824	-	79592057	79601399	A5SS&ES	0.5	50	50	ENSMUST00000159312.2	ENSMUSG00000054702.15	Ap1s3	chr1	protein_coding	adaptor-related protein complex AP-1, sigma 3
chr1	79692717;79695032	79694920;79704283	-	79692717;79702474	79702362;79704283	MXE	0.5	100	100	ENSMUST00000113512.8	ENSMUSG00000073643.12	Wdfy1	chr1	protein_coding	WD repeat and FYVE domain containing 1
chr1	79685288	79686810	-	79685299	79686810	A3SS	0.5	50	50	ENSMUST00000113512.8	ENSMUSG00000073643.12	Wdfy1	chr1	protein_coding	WD repeat and FYVE domain containing 1
chr1	79696991	79707373	-	79704433	79707373	A3SS&ES	0.5	50	50	ENSMUST00000113512.8	ENSMUSG00000073643.12	Wdfy1	chr1	protein_coding	WD repeat and FYVE domain containing 1
chr1	79696991	79711517	-	79707427	79711517	A3SS&ES	0.33	50	50	ENSMUST00000113512.8	ENSMUSG00000073643.12	Wdfy1	chr1	protein_coding	WD repeat and FYVE domain containing 1
chr1	79699985	79711517	-	79707427	79711517	A3SS&ES	0.33	50	50	ENSMUST00000113512.8	ENSMUSG00000073643.12	Wdfy1	chr1	protein_coding	WD repeat and FYVE domain containing 1
chr1	79696991	79711517	-	79696991;79699985	79699931;79711517	ES	0.33	50	50	ENSMUST00000113513.8	ENSMUSG00000073643.12	Wdfy1	chr1	protein_coding	WD repeat and FYVE domain containing 1
chr1	79696991;79707427	79707373;79711517	-	79696991;79699985	79699931;79711517	MXE	0.5	100	100	ENSMUST00000113513.8	ENSMUSG00000073643.12	Wdfy1	chr1	protein_coding	WD repeat and FYVE domain containing 1
chr1	79692717	79702362	-	79692717	79694920	A5SS&ES	0.5	50	50	ENSMUST00000113513.8	ENSMUSG00000073643.12	Wdfy1	chr1	protein_coding	WD repeat and FYVE domain containing 1
chr1	79695032	79704283	-	79695032	79696841	A5SS&ES	0.5	50	50	ENSMUST00000113513.8	ENSMUSG00000073643.12	Wdfy1	chr1	protein_coding	WD repeat and FYVE domain containing 1
chr1	79696991	79711517	-	79696991;79707427	79707373;79711517	ES	0.33	50	50	ENSMUST00000113515.8	ENSMUSG00000073643.12	Wdfy1	chr1	protein_coding	WD repeat and FYVE domain containing 1
chr1	79695032;79704433	79704283;79707373	-	79695032;79696991	79696841;79707373	MXE	0.5	100	100	ENSMUST00000113515.8	ENSMUSG00000073643.12	Wdfy1	chr1	protein_coding	WD repeat and FYVE domain containing 1
chr1	79695032;79696991	79696841;79711517	-	79695032;79707427	79704283;79711517	MXE	0.5	100	100	ENSMUST00000113514.8	ENSMUSG00000073643.12	Wdfy1	chr1	protein_coding	WD repeat and FYVE domain containing 1
chr1	79696991	79707373	-	79696991	79699931	5pMXE	0.33	50	50	ENSMUST00000127771.8	ENSMUSG00000073643.12	Wdfy1	chr1	protein_coding	WD repeat and FYVE domain containing 1
chr1	79696991	79711517	-	79696991	79699931	5pMXE	0.33	50	50	ENSMUST00000127771.8	ENSMUSG00000073643.12	Wdfy1	chr1	protein_coding	WD repeat and FYVE domain containing 1
chr1	79696991	79711517	-	79696991	79707373	5pMXE	0.33	50	50	ENSMUST00000130714.8	ENSMUSG00000073643.12	Wdfy1	chr1	protein_coding	WD repeat and FYVE domain containing 1
chr1	79695032	79704283	-	79702474	79704283	3pMXE	0.5	50	50	ENSMUST00000143368.8	ENSMUSG00000073643.12	Wdfy1	chr1	protein_coding	WD repeat and FYVE domain containing 1
chr1	79739601	79739715	-	79739601	79753677	A5SS	0.5	50	50	ENSMUST00000143368.8	ENSMUSG00000073643.12	Wdfy1	chr1	protein_coding	WD repeat and FYVE domain containing 1
chr1	79788468	79798994	-	79788468;79794672	79794445;79798994	ES	0.5	50	50	ENSMUST00000027467.11	ENSMUSG00000026249.11	Serpine2	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade E, member 2
chr1	79799274	79838794	-	79799274	79836228	5pMXE	0.5	50	50	ENSMUST00000027467.11	ENSMUSG00000026249.11	Serpine2	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade E, member 2
chr1	79788468	79798994	-	79794672	79798994	3pMXE	0.5	50	50	ENSMUST00000153862.2	ENSMUSG00000026249.11	Serpine2	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade E, member 2
chr1	80164798	80167724	+	80162569	80167724	A5SS	0.5	50	50	ENSMUST00000191325.2	ENSMUSG00000099552.2	9830004L10Rik	chr1	lncRNA	RIKEN cDNA 9830004L10 gene
chr1	80178265	80193859	-	80178265	80190650	5pMXE	0.5	50	50	ENSMUST00000058748.2	ENSMUSG00000043230.3	Fam124b	chr1	protein_coding	family with sequence similarity 124, member B
chr1	80281910	80317963	-	80281910;80300773	80300576;80317963	ES	0.5	50	50	ENSMUST00000163119.8	ENSMUSG00000004364.15	Cul3	chr1	protein_coding	cullin 3
chr1	80281910;80299647	80299502;80300576	-	80281910	80300576	cassetteExon	0.5	100	100	ENSMUST00000163119.8	ENSMUSG00000004364.15	Cul3	chr1	protein_coding	cullin 3
chr1	80281910	80300704	-	80281910	80300576	A5SS	0.25	50	50	ENSMUST00000163119.8	ENSMUSG00000004364.15	Cul3	chr1	protein_coding	cullin 3
chr1	80281910;80300773	80300704;80317963	-	80281910	80317963	cassetteExon	0.5	100	100	ENSMUST00000164108.8	ENSMUSG00000004364.15	Cul3	chr1	protein_coding	cullin 3
chr1	80281910	80299502	-	80281910	80317963	A5SS	0.25	50	50	ENSMUST00000164108.8	ENSMUSG00000004364.15	Cul3	chr1	protein_coding	cullin 3
chr1	80249427	80254131	-	80245004	80254131	A3SS	0.5	50	50	ENSMUST00000168372.2	ENSMUSG00000004364.15	Cul3	chr1	protein_coding	cullin 3
chr1	80245004	80246927	-	80245004	80254131	A5SS	0.5	50	50	ENSMUST00000168372.2	ENSMUSG00000004364.15	Cul3	chr1	protein_coding	cullin 3
chr1	80281910	80299502	-	80281910	80300704	A5SS	0.25	50	50	ENSMUST00000170897.8	ENSMUSG00000004364.15	Cul3	chr1	protein_coding	cullin 3
chr1	80423711	80427794	+	80423711	80454331	A3SS	0.5	50	50	ENSMUST00000189139.2	ENSMUSG00000101483.2	1700016L21Rik	chr1	lncRNA	RIKEN cDNA 1700016L21 gene
chr1	80504047	80506366	-	80504047;80506048	80505950;80506366	ES	0.5	50	50	ENSMUST00000077946.12	ENSMUSG00000038608.16	Dock10	chr1	protein_coding	dedicator of cytokinesis 10
chr1	80479543;80481711	80481636;80483042	-	80479543	80483042	cassetteExon	0.5	100	100	ENSMUST00000077946.12	ENSMUSG00000038608.16	Dock10	chr1	protein_coding	dedicator of cytokinesis 10
chr1	80479543;80482915	80482843;80483042	-	80479543	80483042	cassetteExon	0.5	100	100	ENSMUST00000077946.12	ENSMUSG00000038608.16	Dock10	chr1	protein_coding	dedicator of cytokinesis 10
chr1	80493352;80499907	80499902;80501433	-	80493352	80501433	cassetteExon	0.5	100	100	ENSMUST00000077946.12	ENSMUSG00000038608.16	Dock10	chr1	protein_coding	dedicator of cytokinesis 10
chr1	80564168	80564437	-	80564168	80564366	A5SS	0.5	50	50	ENSMUST00000077946.12	ENSMUSG00000038608.16	Dock10	chr1	protein_coding	dedicator of cytokinesis 10
chr1	80626049	80642357	-	80626049	80736043	A5SS	0.25	50	50	ENSMUST00000077946.12	ENSMUSG00000038608.16	Dock10	chr1	protein_coding	dedicator of cytokinesis 10
chr1	80626049	80642826	-	80626049	80736043	A5SS	0.25	50	50	ENSMUST00000077946.12	ENSMUSG00000038608.16	Dock10	chr1	protein_coding	dedicator of cytokinesis 10
chr1	80626049	80687004	-	80626049	80736043	A5SS	0.25	50	50	ENSMUST00000077946.12	ENSMUSG00000038608.16	Dock10	chr1	protein_coding	dedicator of cytokinesis 10
chr1	80479543;80482915	80482843;80483042	-	80479543;80481711	80481636;80483042	MXE	0.5	100	100	ENSMUST00000190595.7	ENSMUSG00000038608.16	Dock10	chr1	protein_coding	dedicator of cytokinesis 10
chr1	80626049	80687004	-	80626049	80642826	5pMXE	0.25	50	50	ENSMUST00000187774.7	ENSMUSG00000038608.16	Dock10	chr1	protein_coding	dedicator of cytokinesis 10
chr1	80626049;80642506	80642357;80642826	-	80626049	80642826	cassetteExon	0.5	100	100	ENSMUST00000187774.7	ENSMUSG00000038608.16	Dock10	chr1	protein_coding	dedicator of cytokinesis 10
chr1	80626046	80642826	-	80626049	80642826	A3SS	0.33	50	50	ENSMUST00000187774.7	ENSMUSG00000038608.16	Dock10	chr1	protein_coding	dedicator of cytokinesis 10
chr1	80479543	80483042	-	80481711	80483042	A3SS	0.33	50	50	ENSMUST00000189486.7	ENSMUSG00000038608.16	Dock10	chr1	protein_coding	dedicator of cytokinesis 10
chr1	80482915	80483042	-	80481711	80483042	A3SS	0.33	50	50	ENSMUST00000189486.7	ENSMUSG00000038608.16	Dock10	chr1	protein_coding	dedicator of cytokinesis 10
chr1	80642506	80642826	-	80626046	80642826	A3SS	0.33	50	50	ENSMUST00000190983.7	ENSMUSG00000038608.16	Dock10	chr1	protein_coding	dedicator of cytokinesis 10
chr1	80626049	80642357	-	80626049	80687004	A5SS	0.25	50	50	ENSMUST00000186087.7	ENSMUSG00000038608.16	Dock10	chr1	protein_coding	dedicator of cytokinesis 10
chr1	81055025	81055124	+	81054764	81055124	A5SS	0.5	50	50	ENSMUST00000137862.8	ENSMUSG00000054976.15	Nyap2	chr1	protein_coding	neuronal tyrosine-phophorylated phosphoinositide 3-kinase adaptor 2
chr1	81169863	81218599	+	81169767	81218599	A5SS	0.5	50	50	ENSMUST00000137862.8	ENSMUSG00000054976.15	Nyap2	chr1	protein_coding	neuronal tyrosine-phophorylated phosphoinositide 3-kinase adaptor 2
chr1	82317017	82318040	+	82294369	82318040	A5SS	0.5	50	50	ENSMUST00000027322.14	ENSMUSG00000026142.16	Rhbdd1	chr1	protein_coding	rhomboid domain containing 1
chr1	82693175	82694019	+	82693175;82693910	82693733;82694019	ES	0.5	50	50	ENSMUST00000113457.9	ENSMUSG00000079465.9	Col4a3	chr1	protein_coding	collagen, type IV, alpha 3
chr1	82694133	82696521	+	82694133;82695726	82695554;82696521	ES	0.5	50	50	ENSMUST00000113457.9	ENSMUSG00000079465.9	Col4a3	chr1	protein_coding	collagen, type IV, alpha 3
chr1	82697905	82702508	-	82676063	82702508	A3SS	0.5	50	50	ENSMUST00000181720.2	ENSMUSG00000097564.3	C430014B12Rik	chr1	lncRNA	RIKEN cDNA C430014B12 gene
chr1	82707157	82713140	+	82707157;82709003	82708834;82713140	ES	0.5	50	50	ENSMUST00000078332.13	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82713228	82724804	+	82713228;82719697	82719539;82724804	ES	0.33	50	50	ENSMUST00000078332.13	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82719697	82728241	+	82719697;82724863	82724804;82728241	ES	0.25	50	50	ENSMUST00000078332.13	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82705057;82705959	82705788;82706937	+	82705057	82706937	cassetteExon	0.5	100	100	ENSMUST00000078332.13	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82713228;82714808	82714734;82719539	+	82713228	82719539	cassetteExon	0.5	100	100	ENSMUST00000078332.13	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82713228;82714808	82714734;82728241	+	82713228;82724863	82719539;82728241	MXE	0.5	100	100	ENSMUST00000078332.13	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82713228;82723277	82723245;82724804	+	82713228;82719697	82719539;82724804	MXE	0.5	100	100	ENSMUST00000078332.13	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82719697;82723277	82723245;82724804	+	82719697	82724804	cassetteExon	0.5	100	100	ENSMUST00000078332.13	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82709003	82713137	+	82709003	82713140	A3SS	0.5	50	50	ENSMUST00000078332.13	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82713228	82728241	+	82713228;82724863	82724804;82728241	ES	0.25	50	50	ENSMUST00000073025.12	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82713228;82714808	82714734;82728241	+	82713228;82724863	82724804;82728241	MXE	0.5	100	100	ENSMUST00000073025.12	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82713228;82719697	82719539;82728241	+	82713228;82724863	82724804;82728241	MXE	0.5	100	100	ENSMUST00000073025.12	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82713228;82723277	82723245;82724804	+	82713228	82724804	cassetteExon	0.5	100	100	ENSMUST00000073025.12	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82707157	82713140	+	82707157	82708834	A3SS&ES	0.5	50	50	ENSMUST00000073025.12	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82713228	82728241	+	82713228;82714808	82714734;82728241	ES	0.25	50	50	ENSMUST00000161648.8	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82713228;82719697	82719539;82728241	+	82713228;82714808	82714734;82728241	MXE	0.5	100	100	ENSMUST00000161648.8	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82714808;82719697	82719539;82728241	+	82714808	82728241	cassetteExon	0.5	100	100	ENSMUST00000161648.8	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82713228	82723245	+	82713228	82714734	A3SS&ES	0.2	50	50	ENSMUST00000161648.8	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82713228;82723277	82723245;82724804	+	82713228;82719697	82714734;82724804	MXE	0.5	100	100	ENSMUST00000162003.8	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82713228;82719697	82719539;82728241	+	82713228	82728241	cassetteExon	0.5	100	100	ENSMUST00000160972.8	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82713228	82723245	+	82713228	82728241	A3SS	0.2	50	50	ENSMUST00000160972.8	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82713228;82714808	82714734;82728241	+	82713228;82724863	82723245;82728241	MXE	0.5	100	100	ENSMUST00000160750.8	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82713228;82719697	82719539;82723245	+	82713228	82723245	cassetteExon	0.5	100	100	ENSMUST00000160750.8	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82713228;82719697	82719539;82728241	+	82713228;82724863	82723245;82728241	MXE	0.5	100	100	ENSMUST00000160750.8	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82713228	82723245	+	82713228	82719539	3pMXE	0.2	50	50	ENSMUST00000159279.8	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82713228	82724804	+	82713228	82719539	3pMXE	0.2	50	50	ENSMUST00000159279.8	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82713228	82728241	+	82713228	82719539	3pMXE	0.2	50	50	ENSMUST00000159279.8	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82719697	82723245	+	82719697	82728241	A3SS	0.33	50	50	ENSMUST00000160744.2	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82713228	82723245	+	82719697	82723245	5pMXE	0.5	50	50	ENSMUST00000160632.8	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82713228	82728241	+	82724863	82728241	5pMXE	0.25	50	50	ENSMUST00000162794.2	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82714808	82728241	+	82724863	82728241	5pMXE	0.25	50	50	ENSMUST00000162794.2	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82719697	82728241	+	82724863	82728241	5pMXE	0.25	50	50	ENSMUST00000162794.2	ENSMUSG00000026150.15	Mff	chr1	protein_coding	mitochondrial fission factor
chr1	82735432	82741648	-	82735432;82738040	82737889;82741648	ES	0.5	50	50	ENSMUST00000027331.3	ENSMUSG00000026149.3	Tm4sf20	chr1	protein_coding	transmembrane 4 L six family member 20
chr1	82854045	82859949	+	82854045;82857848	82857729;82859949	ES	0.33	50	50	ENSMUST00000189220.7	ENSMUSG00000026159.14	Agfg1	chr1	protein_coding	ArfGAP with FG repeats 1
chr1	82863908	82871145	+	82863908;82864188	82864096;82871145	ES	0.33	50	50	ENSMUST00000189220.7	ENSMUSG00000026159.14	Agfg1	chr1	protein_coding	ArfGAP with FG repeats 1
chr1	82857848;82858539	82858468;82859949	+	82857848	82859949	cassetteExon	0.5	100	100	ENSMUST00000189220.7	ENSMUSG00000026159.14	Agfg1	chr1	protein_coding	ArfGAP with FG repeats 1
chr1	82864188;82869228	82869181;82871145	+	82864188	82871145	cassetteExon	0.5	100	100	ENSMUST00000189220.7	ENSMUSG00000026159.14	Agfg1	chr1	protein_coding	ArfGAP with FG repeats 1
chr1	82860158	82860965	+	82860158	82860902	A3SS	0.5	50	50	ENSMUST00000189220.7	ENSMUSG00000026159.14	Agfg1	chr1	protein_coding	ArfGAP with FG repeats 1
chr1	82871303	82872197	+	82871303	82872203	A3SS	0.5	50	50	ENSMUST00000189220.7	ENSMUSG00000026159.14	Agfg1	chr1	protein_coding	ArfGAP with FG repeats 1
chr1	82818007	82836077	+	82817610	82836077	A5SS	0.5	50	50	ENSMUST00000189220.7	ENSMUSG00000026159.14	Agfg1	chr1	protein_coding	ArfGAP with FG repeats 1
chr1	82869228	82871145	+	82863908	82871145	A5SS	0.33	50	50	ENSMUST00000113444.8	ENSMUSG00000026159.14	Agfg1	chr1	protein_coding	ArfGAP with FG repeats 1
chr1	82858539	82859949	+	82854045	82859949	A5SS	0.33	50	50	ENSMUST00000190052.7	ENSMUSG00000026159.14	Agfg1	chr1	protein_coding	ArfGAP with FG repeats 1
chr1	82854045	82859949	+	82854045	82857729	3pMXE	0.5	50	50	ENSMUST00000186043.2	ENSMUSG00000026159.14	Agfg1	chr1	protein_coding	ArfGAP with FG repeats 1
chr1	83004101	83016091	-	83004101;83005863	83005734;83016091	ES	0.5	50	50	ENSMUST00000045560.15	ENSMUSG00000038496.17	Slc19a3	chr1	protein_coding	solute carrier family 19, member 3
chr1	82997245	82997863	-	82997245	83000055	A5SS	0.5	50	50	ENSMUST00000045560.15	ENSMUSG00000038496.17	Slc19a3	chr1	protein_coding	solute carrier family 19, member 3
chr1	83094623	83095517	+	83094623	83095520	A3SS	0.5	50	50	ENSMUST00000027351.13	ENSMUSG00000026166.15	Ccl20	chr1	protein_coding	chemokine (C-C motif) ligand 20
chr1	83137559	83157014	+	83137560	83157014	A5SS	0.5	50	50	ENSMUST00000133079.2	ENSMUSG00000053161.17	Daw1	chr1	protein_coding	dynein assembly factor with WDR repeat domains 1
chr1	83157086	83158086	+	83157086	83158066	A3SS	0.5	50	50	ENSMUST00000065436.10	ENSMUSG00000053161.17	Daw1	chr1	protein_coding	dynein assembly factor with WDR repeat domains 1
chr1	83161099	83165627	+	83161099	83174942	A3SS	0.5	50	50	ENSMUST00000065436.10	ENSMUSG00000053161.17	Daw1	chr1	protein_coding	dynein assembly factor with WDR repeat domains 1
chr1	83187089	83187880	+	83187089	83187876	A3SS	0.5	50	50	ENSMUST00000065436.10	ENSMUSG00000053161.17	Daw1	chr1	protein_coding	dynein assembly factor with WDR repeat domains 1
chr1	83170444	83174942	+	83161099	83174942	A5SS	0.5	50	50	ENSMUST00000065436.10	ENSMUSG00000053161.17	Daw1	chr1	protein_coding	dynein assembly factor with WDR repeat domains 1
chr1	83241555;83243776	83243690;83245023	-	83241555	83245023	cassetteExon	0.5	100	100	ENSMUST00000160953.8	ENSMUSG00000026163.18	Sphkap	chr1	protein_coding	SPHK1 interactor, AKAP domain containing
chr1	83340049;83362693	83362615;83385701	-	83340049	83385701	cassetteExon	0.5	100	100	ENSMUST00000160953.8	ENSMUSG00000026163.18	Sphkap	chr1	protein_coding	SPHK1 interactor, AKAP domain containing
chr1	83241555	83245023	-	83243776	83245023	3pMXE	0.5	50	50	ENSMUST00000053075.15	ENSMUSG00000026163.18	Sphkap	chr1	protein_coding	SPHK1 interactor, AKAP domain containing
chr1	83340049	83385701	-	83362693	83385701	3pMXE	0.5	50	50	ENSMUST00000160567.2	ENSMUSG00000026163.18	Sphkap	chr1	protein_coding	SPHK1 interactor, AKAP domain containing
chr1	83859239;83859945	83859880;83888436	-	83859239	83888436	cassetteExon	0.5	100	100	ENSMUST00000189405.7	ENSMUSG00000100580.7	4933436I20Rik	chr1	lncRNA	RIKEN cDNA 4933436I20 gene
chr1	83858577	83859102	-	83757433	83859102	A3SS	0.5	50	50	ENSMUST00000189405.7	ENSMUSG00000100580.7	4933436I20Rik	chr1	lncRNA	RIKEN cDNA 4933436I20 gene
chr1	84137099	84313755	-	84137099	84262062	5pMXE	0.25	50	50	ENSMUST00000168574.9	ENSMUSG00000045658.17	Pid1	chr1	protein_coding	phosphotyrosine interaction domain containing 1
chr1	84137099	84341751	-	84137099	84262062	5pMXE	0.25	50	50	ENSMUST00000168574.9	ENSMUSG00000045658.17	Pid1	chr1	protein_coding	phosphotyrosine interaction domain containing 1
chr1	84058519	84136953	-	84016228	84136953	A3SS	0.25	50	50	ENSMUST00000168574.9	ENSMUSG00000045658.17	Pid1	chr1	protein_coding	phosphotyrosine interaction domain containing 1
chr1	84086108	84136953	-	84016228	84136953	A3SS	0.25	50	50	ENSMUST00000168574.9	ENSMUSG00000045658.17	Pid1	chr1	protein_coding	phosphotyrosine interaction domain containing 1
chr1	84093751	84136953	-	84016228	84136953	A3SS	0.25	50	50	ENSMUST00000168574.9	ENSMUSG00000045658.17	Pid1	chr1	protein_coding	phosphotyrosine interaction domain containing 1
chr1	84016228	84030795	-	84016228	84136953	A5SS	0.5	50	50	ENSMUST00000168574.9	ENSMUSG00000045658.17	Pid1	chr1	protein_coding	phosphotyrosine interaction domain containing 1
chr1	84137099	84169061	-	84137099	84262062	A5SS	0.25	50	50	ENSMUST00000168574.9	ENSMUSG00000045658.17	Pid1	chr1	protein_coding	phosphotyrosine interaction domain containing 1
chr1	84137099	84341751	-	84137099	84313755	5pMXE	0.25	50	50	ENSMUST00000176559.8	ENSMUSG00000045658.17	Pid1	chr1	protein_coding	phosphotyrosine interaction domain containing 1
chr1	84137099	84169061	-	84137099	84313755	A5SS	0.25	50	50	ENSMUST00000176559.8	ENSMUSG00000045658.17	Pid1	chr1	protein_coding	phosphotyrosine interaction domain containing 1
chr1	84086108	84136953	-	84058519	84136953	A3SS	0.25	50	50	ENSMUST00000176720.2	ENSMUSG00000045658.17	Pid1	chr1	protein_coding	phosphotyrosine interaction domain containing 1
chr1	84093751	84136953	-	84058519	84136953	A3SS	0.25	50	50	ENSMUST00000176720.2	ENSMUSG00000045658.17	Pid1	chr1	protein_coding	phosphotyrosine interaction domain containing 1
chr1	84093751	84136953	-	84086108	84136953	A3SS	0.25	50	50	ENSMUST00000175996.8	ENSMUSG00000045658.17	Pid1	chr1	protein_coding	phosphotyrosine interaction domain containing 1
chr1	84137099	84169061	-	84137099	84341751	A5SS	0.25	50	50	ENSMUST00000175996.8	ENSMUSG00000045658.17	Pid1	chr1	protein_coding	phosphotyrosine interaction domain containing 1
chr1	84563342	84601380	-	84563342	84673174	A5SS	0.33	50	50	ENSMUST00000049126.13	ENSMUSG00000036766.13	Dner	chr1	protein_coding	delta/notch-like EGF repeat containing
chr1	84563342	84618146	-	84563342	84673174	A5SS	0.33	50	50	ENSMUST00000049126.13	ENSMUSG00000036766.13	Dner	chr1	protein_coding	delta/notch-like EGF repeat containing
chr1	84563342	84601380	-	84563342	84618146	A5SS	0.33	50	50	ENSMUST00000185606.3	ENSMUSG00000036766.13	Dner	chr1	protein_coding	delta/notch-like EGF repeat containing
chr1	84754133	84760548	-	84754133;84755228	84755145;84760548	ES	0.33	50	50	ENSMUST00000027421.13	ENSMUSG00000026219.15	Trip12	chr1	protein_coding	thyroid hormone receptor interactor 12
chr1	84792690	84817955	-	84792690	84816950	5pMXE	0.25	50	50	ENSMUST00000027421.13	ENSMUSG00000026219.15	Trip12	chr1	protein_coding	thyroid hormone receptor interactor 12
chr1	84792690	84818204	-	84792690	84816950	5pMXE	0.25	50	50	ENSMUST00000027421.13	ENSMUSG00000026219.15	Trip12	chr1	protein_coding	thyroid hormone receptor interactor 12
chr1	84772048;84773536	84773411;84792544	-	84772048	84792544	cassetteExon	0.5	100	100	ENSMUST00000027421.13	ENSMUSG00000026219.15	Trip12	chr1	protein_coding	thyroid hormone receptor interactor 12
chr1	84708320	84709344	-	84708417	84709344	A3SS	0.5	50	50	ENSMUST00000027421.13	ENSMUSG00000026219.15	Trip12	chr1	protein_coding	thyroid hormone receptor interactor 12
chr1	84722891	84724899	-	84722906	84724899	A3SS	0.5	50	50	ENSMUST00000027421.13	ENSMUSG00000026219.15	Trip12	chr1	protein_coding	thyroid hormone receptor interactor 12
chr1	84736767	84738484	-	84736848	84738484	A3SS	0.5	50	50	ENSMUST00000027421.13	ENSMUSG00000026219.15	Trip12	chr1	protein_coding	thyroid hormone receptor interactor 12
chr1	84755210	84760548	-	84755228	84760548	A3SS	0.33	50	50	ENSMUST00000027421.13	ENSMUSG00000026219.15	Trip12	chr1	protein_coding	thyroid hormone receptor interactor 12
chr1	84792690	84816332	-	84792690	84816950	A5SS	0.25	50	50	ENSMUST00000027421.13	ENSMUSG00000026219.15	Trip12	chr1	protein_coding	thyroid hormone receptor interactor 12
chr1	84792690	84816332	-	84792690	84818204	A5SS	0.25	50	50	ENSMUST00000186465.7	ENSMUSG00000026219.15	Trip12	chr1	protein_coding	thyroid hormone receptor interactor 12
chr1	84792690	84817955	-	84792690	84818204	A5SS	0.25	50	50	ENSMUST00000186465.7	ENSMUSG00000026219.15	Trip12	chr1	protein_coding	thyroid hormone receptor interactor 12
chr1	84754133	84760548	-	84754133;84755210	84755145;84760548	ES	0.33	50	50	ENSMUST00000186648.7	ENSMUSG00000026219.15	Trip12	chr1	protein_coding	thyroid hormone receptor interactor 12
chr1	84792690	84816332	-	84792690	84817955	A5SS	0.25	50	50	ENSMUST00000190067.7	ENSMUSG00000026219.15	Trip12	chr1	protein_coding	thyroid hormone receptor interactor 12
chr1	84817689;84825799	84825601;84858813	+	84817689	84858813	cassetteExon	0.5	100	100	ENSMUST00000097672.4	ENSMUSG00000073633.10	Fbxo36	chr1	protein_coding	F-box protein 36
chr1	84844264	84858813	+	84817689	84858813	A5SS	0.25	50	50	ENSMUST00000097672.4	ENSMUSG00000073633.10	Fbxo36	chr1	protein_coding	F-box protein 36
chr1	84847811	84858813	+	84817689	84858813	A5SS	0.25	50	50	ENSMUST00000097672.4	ENSMUSG00000073633.10	Fbxo36	chr1	protein_coding	F-box protein 36
chr1	84844264	84858813	+	84825799	84858813	A5SS	0.25	50	50	ENSMUST00000143656.8	ENSMUSG00000073633.10	Fbxo36	chr1	protein_coding	F-box protein 36
chr1	84847811	84858813	+	84825799	84858813	A5SS	0.25	50	50	ENSMUST00000143656.8	ENSMUSG00000073633.10	Fbxo36	chr1	protein_coding	F-box protein 36
chr1	84847811	84858813	+	84844264	84858813	A5SS	0.25	50	50	ENSMUST00000139562.8	ENSMUSG00000073633.10	Fbxo36	chr1	protein_coding	F-box protein 36
chr1	84907285	84912434	-	84907285	84912581	A5SS	0.5	50	50	ENSMUST00000027422.7	ENSMUSG00000026220.7	Slc16a14	chr1	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 14
chr1	85223428	85226020	-	85223428	85224018	5pMXE	0.5	50	50	ENSMUST00000159114.2	ENSMUSG00000052477.16	C130026I21Rik	chr1	protein_coding	RIKEN cDNA C130026I21 gene
chr1	85238620	85247754	-	85091376	85247754	A3SS	0.5	50	50	ENSMUST00000161267.8	ENSMUSG00000052477.16	C130026I21Rik	chr1	protein_coding	RIKEN cDNA C130026I21 gene
chr1	85091376	85239556	-	85091376	85247754	A5SS	0.5	50	50	ENSMUST00000161267.8	ENSMUSG00000052477.16	C130026I21Rik	chr1	protein_coding	RIKEN cDNA C130026I21 gene
chr1	85223428	85226020	-	85219618	85226020	A3SS	0.33	50	50	ENSMUST00000161685.8	ENSMUSG00000052477.16	C130026I21Rik	chr1	protein_coding	RIKEN cDNA C130026I21 gene
chr1	85224857	85226020	-	85219618	85226020	A3SS	0.33	50	50	ENSMUST00000161685.8	ENSMUSG00000052477.16	C130026I21Rik	chr1	protein_coding	RIKEN cDNA C130026I21 gene
chr1	85232297;85235190	85235107;85237416	-	85232297	85237416	cassetteExon	0.5	100	100	ENSMUST00000159582.8	ENSMUSG00000052477.16	C130026I21Rik	chr1	protein_coding	RIKEN cDNA C130026I21 gene
chr1	85224857	85226020	-	85223428	85226020	A3SS	0.33	50	50	ENSMUST00000159582.8	ENSMUSG00000052477.16	C130026I21Rik	chr1	protein_coding	RIKEN cDNA C130026I21 gene
chr1	85066537	85067248	-	85062865	85067248	A3SS	0.5	50	50	ENSMUST00000161724.8	ENSMUSG00000089844.8	A530032D15Rik	chr1	protein_coding	RIKEN cDNA A530032D15Rik gene
chr1	85084411	85090172	+	85084411;85089680	85089530;85090172	ES	0.33	50	50	ENSMUST00000162353.8	ENSMUSG00000072109.12	A530040E14Rik	chr1	lncRNA	RIKEN cDNA A530040E14 gene
chr1	85084411;85089287	85089211;85089530	+	85084411	85089530	cassetteExon	0.5	100	100	ENSMUST00000162353.8	ENSMUSG00000072109.12	A530040E14Rik	chr1	lncRNA	RIKEN cDNA A530040E14 gene
chr1	85089680;85090032	85089913;85090172	+	85089680	85090172	cassetteExon	0.5	100	100	ENSMUST00000162353.8	ENSMUSG00000072109.12	A530040E14Rik	chr1	lncRNA	RIKEN cDNA A530040E14 gene
chr1	85084411	85084906	+	85084411	85089530	A3SS	0.25	50	50	ENSMUST00000162353.8	ENSMUSG00000072109.12	A530040E14Rik	chr1	lncRNA	RIKEN cDNA A530040E14 gene
chr1	85084411	85089211	+	85084411;85085011	85084906;85089211	ES	0.5	50	50	ENSMUST00000093501.10	ENSMUSG00000072109.12	A530040E14Rik	chr1	lncRNA	RIKEN cDNA A530040E14 gene
chr1	85084411;85089680	85089211;85090172	+	85084411	85090172	cassetteExon	0.5	100	100	ENSMUST00000161666.8	ENSMUSG00000072109.12	A530040E14Rik	chr1	lncRNA	RIKEN cDNA A530040E14 gene
chr1	85084411	85084906	+	85084411	85090172	A3SS	0.25	50	50	ENSMUST00000161666.8	ENSMUSG00000072109.12	A530040E14Rik	chr1	lncRNA	RIKEN cDNA A530040E14 gene
chr1	85090032	85090172	+	85084411	85090172	A5SS	0.33	50	50	ENSMUST00000161666.8	ENSMUSG00000072109.12	A530040E14Rik	chr1	lncRNA	RIKEN cDNA A530040E14 gene
chr1	85084411	85090172	+	85089680	85090172	5pMXE	0.33	50	50	ENSMUST00000161150.3	ENSMUSG00000072109.12	A530040E14Rik	chr1	lncRNA	RIKEN cDNA A530040E14 gene
chr1	85180029;85185918	85185725;85190348	+	85180029	85190348	cassetteExon	0.5	100	100	ENSMUST00000161424.5	ENSMUSG00000079457.12	Gm7609	chr1	protein_coding	predicted pseudogene 7609
chr1	85250230;85250650	85250533;85252827	+	85250230	85252827	cassetteExon	0.5	100	100	ENSMUST00000163068.8	ENSMUSG00000079455.10	Gm16026	chr1	transcribed_unprocessed_pseudogene	predicted pseudogene 16026
chr1	85250230;85250682	85250533;85252827	+	85250230	85252827	cassetteExon	0.5	100	100	ENSMUST00000163068.8	ENSMUSG00000079455.10	Gm16026	chr1	transcribed_unprocessed_pseudogene	predicted pseudogene 16026
chr1	85252974	85253744	+	85252974	85253209	A3SS	0.33	50	50	ENSMUST00000163068.8	ENSMUSG00000079455.10	Gm16026	chr1	transcribed_unprocessed_pseudogene	predicted pseudogene 16026
chr1	85252974	85254523	+	85252974	85253209	A3SS	0.33	50	50	ENSMUST00000163068.8	ENSMUSG00000079455.10	Gm16026	chr1	transcribed_unprocessed_pseudogene	predicted pseudogene 16026
chr1	85252974	85254523	+	85252974	85253744	3pMXE	0.33	50	50	ENSMUST00000162652.8	ENSMUSG00000079455.10	Gm16026	chr1	transcribed_unprocessed_pseudogene	predicted pseudogene 16026
chr1	85250682	85252827	+	85250650	85252827	A5SS	0.33	50	50	ENSMUST00000162652.8	ENSMUSG00000079455.10	Gm16026	chr1	transcribed_unprocessed_pseudogene	predicted pseudogene 16026
chr1	85250230	85252827	+	85250230	85250533	3pMXE	0.5	50	50	ENSMUST00000159849.8	ENSMUSG00000079455.10	Gm16026	chr1	transcribed_unprocessed_pseudogene	predicted pseudogene 16026
chr1	85454436;85464149	85463990;85466751	+	85454436	85466751	cassetteExon	0.5	100	100	ENSMUST00000239236.2	ENSMUSG00000118607.2	Gm7592	chr1	protein_coding	predicted gene 7592
chr1	85511301	85511899	-	85511301	85512624	A5SS	0.5	50	50	ENSMUST00000128339.8	ENSMUSG00000070034.14	Sp110	chr1	protein_coding	Sp110 nuclear body protein
chr1	85523830;85526117	85525966;85526350	-	85523830	85526350	cassetteExon	0.5	100	100	ENSMUST00000093508.7	ENSMUSG00000070034.14	Sp110	chr1	protein_coding	Sp110 nuclear body protein
chr1	85523448	85523683	-	85522154	85523683	A3SS	0.5	50	50	ENSMUST00000093508.7	ENSMUSG00000070034.14	Sp110	chr1	protein_coding	Sp110 nuclear body protein
chr1	85523830	85526350	-	85526117	85526350	3pMXE	0.5	50	50	ENSMUST00000130727.2	ENSMUSG00000070034.14	Sp110	chr1	protein_coding	Sp110 nuclear body protein
chr1	85553886;85555979	85555899;85558181	+	85553886	85558181	cassetteExon	0.5	100	100	ENSMUST00000080204.11	ENSMUSG00000070031.12	Sp140	chr1	protein_coding	Sp140 nuclear body protein
chr1	85563327	85565548	+	85563327	85565545	A3SS	0.5	50	50	ENSMUST00000080204.11	ENSMUSG00000070031.12	Sp140	chr1	protein_coding	Sp140 nuclear body protein
chr1	85570368;85571067	85570656;85572305	+	85570368	85572305	cassetteExon	0.5	100	100	ENSMUST00000161497.2	ENSMUSG00000070031.12	Sp140	chr1	protein_coding	Sp140 nuclear body protein
chr1	85570368	85572305	+	85571067	85572305	5pMXE	0.5	50	50	ENSMUST00000160119.2	ENSMUSG00000070031.12	Sp140	chr1	protein_coding	Sp140 nuclear body protein
chr1	85606830	85619696	+	85606830;85608860	85608807;85619696	ES	0.5	50	50	ENSMUST00000155094.8	ENSMUSG00000026222.17	Sp100	chr1	protein_coding	nuclear antigen Sp100
chr1	85608860	85621980	+	85608860;85619770	85619696;85621980	ES	0.33	50	50	ENSMUST00000155094.8	ENSMUSG00000026222.17	Sp100	chr1	protein_coding	nuclear antigen Sp100
chr1	85601492	85602376	+	85601492	85602916	A3SS	0.5	50	50	ENSMUST00000155094.8	ENSMUSG00000026222.17	Sp100	chr1	protein_coding	nuclear antigen Sp100
chr1	85608860	85609938	+	85608860	85619696	A3SS	0.33	50	50	ENSMUST00000155094.8	ENSMUSG00000026222.17	Sp100	chr1	protein_coding	nuclear antigen Sp100
chr1	85608860	85621980	+	85608860	85609938	3pMXE	0.33	50	50	ENSMUST00000054279.15	ENSMUSG00000026222.17	Sp100	chr1	protein_coding	nuclear antigen Sp100
chr1	85606830	85621980	+	85606830;85619770	85619696;85621980	ES	0.33	50	50	ENSMUST00000147552.8	ENSMUSG00000026222.17	Sp100	chr1	protein_coding	nuclear antigen Sp100
chr1	85606830;85608860	85608807;85621980	+	85606830;85619770	85619696;85621980	MXE	0.5	100	100	ENSMUST00000147552.8	ENSMUSG00000026222.17	Sp100	chr1	protein_coding	nuclear antigen Sp100
chr1	85606830	85621980	+	85606830;85608860	85608807;85621980	ES	0.33	50	50	ENSMUST00000153574.8	ENSMUSG00000026222.17	Sp100	chr1	protein_coding	nuclear antigen Sp100
chr1	85629164	85632664	+	85629164	85636714	A3SS	0.33	50	50	ENSMUST00000153574.8	ENSMUSG00000026222.17	Sp100	chr1	protein_coding	nuclear antigen Sp100
chr1	85629164	85634948	+	85629164	85636714	A3SS	0.33	50	50	ENSMUST00000153574.8	ENSMUSG00000026222.17	Sp100	chr1	protein_coding	nuclear antigen Sp100
chr1	85635846	85636714	+	85629164	85636714	A5SS	0.5	50	50	ENSMUST00000153574.8	ENSMUSG00000026222.17	Sp100	chr1	protein_coding	nuclear antigen Sp100
chr1	85629164	85632664	+	85629164	85634948	A3SS	0.33	50	50	ENSMUST00000066427.11	ENSMUSG00000026222.17	Sp100	chr1	protein_coding	nuclear antigen Sp100
chr1	85634675	85634948	+	85629164	85634948	A5SS	0.5	50	50	ENSMUST00000066427.11	ENSMUSG00000026222.17	Sp100	chr1	protein_coding	nuclear antigen Sp100
chr1	85631251	85632664	+	85629164	85632664	A5SS	0.5	50	50	ENSMUST00000132641.8	ENSMUSG00000026222.17	Sp100	chr1	protein_coding	nuclear antigen Sp100
chr1	85651108	85652842	-	85650902	85652842	A3SS	0.5	50	50	ENSMUST00000159320.8	ENSMUSG00000052760.17	A630001G21Rik	chr1	protein_coding	RIKEN cDNA A630001G21 gene
chr1	85654336	85664193	-	85654223	85664193	A3SS	0.25	50	50	ENSMUST00000159320.8	ENSMUSG00000052760.17	A630001G21Rik	chr1	protein_coding	RIKEN cDNA A630001G21 gene
chr1	85663750	85664193	-	85654223	85664193	A3SS	0.25	50	50	ENSMUST00000159320.8	ENSMUSG00000052760.17	A630001G21Rik	chr1	protein_coding	RIKEN cDNA A630001G21 gene
chr1	85650902	85664193	-	85650902	85652842	A5SS&ES	0.5	50	50	ENSMUST00000159122.8	ENSMUSG00000052760.17	A630001G21Rik	chr1	protein_coding	RIKEN cDNA A630001G21 gene
chr1	85654336	85664193	-	85654336	85701781	A5SS	0.5	50	50	ENSMUST00000159122.8	ENSMUSG00000052760.17	A630001G21Rik	chr1	protein_coding	RIKEN cDNA A630001G21 gene
chr1	85663750	85664193	-	85654336	85664193	A3SS	0.25	50	50	ENSMUST00000064788.14	ENSMUSG00000052760.17	A630001G21Rik	chr1	protein_coding	RIKEN cDNA A630001G21 gene
chr1	85650902	85664193	-	85654336	85664193	A3SS&ES	0.25	50	50	ENSMUST00000162038.8	ENSMUSG00000052760.17	A630001G21Rik	chr1	protein_coding	RIKEN cDNA A630001G21 gene
chr1	85654223	85664193	-	85650902	85664193	A3SS	0.25	50	50	ENSMUST00000161453.2	ENSMUSG00000052760.17	A630001G21Rik	chr1	protein_coding	RIKEN cDNA A630001G21 gene
chr1	85663750	85664193	-	85650902	85664193	A3SS	0.25	50	50	ENSMUST00000161453.2	ENSMUSG00000052760.17	A630001G21Rik	chr1	protein_coding	RIKEN cDNA A630001G21 gene
chr1	85721542	85741433	+	85721542	85746078	A3SS	0.5	50	50	ENSMUST00000113360.8	ENSMUSG00000036707.17	Cab39	chr1	protein_coding	calcium binding protein 39
chr1	85722270	85746078	+	85721542	85746078	A5SS	0.25	50	50	ENSMUST00000113360.8	ENSMUSG00000036707.17	Cab39	chr1	protein_coding	calcium binding protein 39
chr1	85723194	85746078	+	85721542	85746078	A5SS	0.25	50	50	ENSMUST00000113360.8	ENSMUSG00000036707.17	Cab39	chr1	protein_coding	calcium binding protein 39
chr1	85743830	85746078	+	85721542	85746078	A5SS	0.25	50	50	ENSMUST00000113360.8	ENSMUSG00000036707.17	Cab39	chr1	protein_coding	calcium binding protein 39
chr1	85722270	85746078	+	85743830	85746078	A5SS&ES	0.25	50	50	ENSMUST00000126962.3	ENSMUSG00000036707.17	Cab39	chr1	protein_coding	calcium binding protein 39
chr1	85723194	85746078	+	85743830	85746078	A5SS&ES	0.25	50	50	ENSMUST00000126962.3	ENSMUSG00000036707.17	Cab39	chr1	protein_coding	calcium binding protein 39
chr1	85722270;85723194	85723078;85746078	+	85722270	85746078	cassetteExon	0.5	100	100	ENSMUST00000130754.8	ENSMUSG00000036707.17	Cab39	chr1	protein_coding	calcium binding protein 39
chr1	85833123	85834729	+	85833123;85834253	85834143;85834729	ES	0.5	50	50	ENSMUST00000027425.16	ENSMUSG00000026223.16	Itm2c	chr1	protein_coding	integral membrane protein 2C
chr1	85833123	85834729	+	85834253	85834729	5pMXE	0.5	50	50	ENSMUST00000139837.2	ENSMUSG00000026223.16	Itm2c	chr1	protein_coding	integral membrane protein 2C
chr1	85858257	85868276	+	85858257	85859006	3pMXE	0.5	50	50	ENSMUST00000027426.11	ENSMUSG00000026224.12	4933407L21Rik	chr1	protein_coding	RIKEN cDNA 4933407L21 gene
chr1	85950028	85952049	+	85944791	85952049	A5SS	0.33	50	50	ENSMUST00000129169.2	ENSMUSG00000026226.17	Spata3	chr1	protein_coding	spermatogenesis associated 3
chr1	85950071	85952049	+	85944791	85952049	A5SS	0.33	50	50	ENSMUST00000129169.2	ENSMUSG00000026226.17	Spata3	chr1	protein_coding	spermatogenesis associated 3
chr1	85954279	85957301	+	85954279	85956934	3pMXE	0.33	50	50	ENSMUST00000149469.3	ENSMUSG00000026226.17	Spata3	chr1	protein_coding	spermatogenesis associated 3
chr1	85954279	85954574	+	85954279	85956934	A3SS	0.33	50	50	ENSMUST00000149469.3	ENSMUSG00000026226.17	Spata3	chr1	protein_coding	spermatogenesis associated 3
chr1	85950071	85952052	+	85946546	85952052	A5SS	0.5	50	50	ENSMUST00000149469.3	ENSMUSG00000026226.17	Spata3	chr1	protein_coding	spermatogenesis associated 3
chr1	85950071	85954136	+	85952223	85954136	A5SS&ES	0.5	50	50	ENSMUST00000149469.3	ENSMUSG00000026226.17	Spata3	chr1	protein_coding	spermatogenesis associated 3
chr1	85950071	85954136	+	85950071;85952223	85952049;85954136	ES	0.5	50	50	ENSMUST00000052854.13	ENSMUSG00000026226.17	Spata3	chr1	protein_coding	spermatogenesis associated 3
chr1	85950071	85952052	+	85950071	85952049	A3SS	0.33	50	50	ENSMUST00000052854.13	ENSMUSG00000026226.17	Spata3	chr1	protein_coding	spermatogenesis associated 3
chr1	85954279	85954574	+	85954279	85957301	A3SS	0.33	50	50	ENSMUST00000052854.13	ENSMUSG00000026226.17	Spata3	chr1	protein_coding	spermatogenesis associated 3
chr1	85950028	85952049	+	85950071	85952049	A5SS	0.33	50	50	ENSMUST00000052854.13	ENSMUSG00000026226.17	Spata3	chr1	protein_coding	spermatogenesis associated 3
chr1	85950071	85954136	+	85950071	85952052	3pMXE	0.33	50	50	ENSMUST00000152501.8	ENSMUSG00000026226.17	Spata3	chr1	protein_coding	spermatogenesis associated 3
chr1	85950071	85954136	+	85950071;85952223	85952052;85954136	ES	0.5	50	50	ENSMUST00000113344.8	ENSMUSG00000026226.17	Spata3	chr1	protein_coding	spermatogenesis associated 3
chr1	85950071	85954136	+	85950071	85952049	3pMXE	0.33	50	50	ENSMUST00000135440.2	ENSMUSG00000026226.17	Spata3	chr1	protein_coding	spermatogenesis associated 3
chr1	85974294	85976310	+	85974294	85976313	A3SS	0.5	50	50	ENSMUST00000027429.11	ENSMUSG00000026227.12	2810459M11Rik	chr1	protein_coding	RIKEN cDNA 2810459M11 gene
chr1	85992728	85998305	+	85992527	85998305	A5SS	0.5	50	50	ENSMUST00000147807.8	ENSMUSG00000026229.18	Psmd1	chr1	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
chr1	85998348	85999336	+	85998348;85999245	85999143;85999336	ES	0.5	50	50	ENSMUST00000143200.8	ENSMUSG00000026229.18	Psmd1	chr1	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
chr1	85999409;85999718	85999549;86003521	+	85999409	86003521	cassetteExon	0.5	100	100	ENSMUST00000139715.8	ENSMUSG00000026229.18	Psmd1	chr1	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
chr1	86038790	86044297	+	86022062	86044297	A5SS	0.5	50	50	ENSMUST00000139715.8	ENSMUSG00000026229.18	Psmd1	chr1	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
chr1	86058453	86060436	+	86058451	86060436	A5SS	0.5	50	50	ENSMUST00000139715.8	ENSMUSG00000026229.18	Psmd1	chr1	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
chr1	86064838	86082433	+	86064838	86066802	3pMXE	0.5	50	50	ENSMUST00000027432.9	ENSMUSG00000026229.18	Psmd1	chr1	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
chr1	85999409	86003521	+	85999409	85999549	3pMXE	0.5	50	50	ENSMUST00000133480.8	ENSMUSG00000026229.18	Psmd1	chr1	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
chr1	86027954	86030096	-	86027954	86030144	A5SS	0.5	50	50	ENSMUST00000027431.7	ENSMUSG00000026228.7	Htr2b	chr1	protein_coding	5-hydroxytryptamine (serotonin) receptor 2B
chr1	86087845	86092418	+	86087845	86090387	3pMXE	0.5	50	50	ENSMUST00000135197.2	ENSMUSG00000094638.2	Gm21972	chr1	protein_coding	predicted gene 21972
chr1	86087845	86092418	+	86087845;86090557	86090387;86092418	ES	0.5	50	50	ENSMUST00000123618.8	ENSMUSG00000062590.14	Armc9	chr1	protein_coding	armadillo repeat containing 9
chr1	86140827;86146620	86146570;86172288	+	86140827	86172288	cassetteExon	0.5	100	100	ENSMUST00000123618.8	ENSMUSG00000062590.14	Armc9	chr1	protein_coding	armadillo repeat containing 9
chr1	86104634	86105857	+	86104634	86113827	A3SS	0.5	50	50	ENSMUST00000123618.8	ENSMUSG00000062590.14	Armc9	chr1	protein_coding	armadillo repeat containing 9
chr1	86135765	86140775	+	86135765	86140772	A3SS	0.5	50	50	ENSMUST00000123618.8	ENSMUSG00000062590.14	Armc9	chr1	protein_coding	armadillo repeat containing 9
chr1	86172392	86184948	+	86172392;86180114	86179999;86184948	ES	0.5	50	50	ENSMUST00000135973.8	ENSMUSG00000062590.14	Armc9	chr1	protein_coding	armadillo repeat containing 9
chr1	86185084	86189764	+	86185084	86189761	A3SS	0.5	50	50	ENSMUST00000113309.9	ENSMUSG00000062590.14	Armc9	chr1	protein_coding	armadillo repeat containing 9
chr1	86189887	86196628	+	86189887	86202105	A3SS	0.5	50	50	ENSMUST00000113309.9	ENSMUSG00000062590.14	Armc9	chr1	protein_coding	armadillo repeat containing 9
chr1	86172392	86184948	+	86172392	86179999	3pMXE	0.5	50	50	ENSMUST00000131412.8	ENSMUSG00000062590.14	Armc9	chr1	protein_coding	armadillo repeat containing 9
chr1	86231970	86232767	+	86231276	86232767	A5SS	0.5	50	50	ENSMUST00000113306.4	ENSMUSG00000079445.4	B3gnt7	chr1	protein_coding	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7
chr1	86285945	86286289	-	86285945	86286928	A5SS	0.5	50	50	ENSMUST00000027438.8	ENSMUSG00000026234.13	Ncl	chr1	protein_coding	nucleolin
chr1	86287421	86294855	+	86287729	86294855	A5SS	0.5	50	50	ENSMUST00000127284.2	ENSMUSG00000073627.8	C130036L24Rik	chr1	lncRNA	RIKEN cDNA C130036L24 gene
chr1	86315929	86317064	-	86315929	86348682	A5SS	0.33	50	50	ENSMUST00000212541.2	ENSMUSG00000026237.7	Nmur1	chr1	protein_coding	neuromedin U receptor 1
chr1	86315929	86325755	-	86315929	86348682	A5SS	0.33	50	50	ENSMUST00000212541.2	ENSMUSG00000026237.7	Nmur1	chr1	protein_coding	neuromedin U receptor 1
chr1	86315929	86325755	-	86315929	86317064	5pMXE	0.33	50	50	ENSMUST00000212058.2	ENSMUSG00000026237.7	Nmur1	chr1	protein_coding	neuromedin U receptor 1
chr1	86456966	86457453	+	86456966;86457274	86457178;86457453	ES	0.5	50	50	ENSMUST00000045897.15	ENSMUSG00000026238.15	Ptma	chr1	protein_coding	prothymosin alpha
chr1	86454672;86456578	86456497;86456895	+	86454672	86456895	cassetteExon	0.5	100	100	ENSMUST00000045897.15	ENSMUSG00000026238.15	Ptma	chr1	protein_coding	prothymosin alpha
chr1	86454672	86455571	+	86454672	86456895	A3SS	0.33	50	50	ENSMUST00000045897.15	ENSMUSG00000026238.15	Ptma	chr1	protein_coding	prothymosin alpha
chr1	86457526	86457726	+	86457526	86457687	A3SS	0.5	50	50	ENSMUST00000045897.15	ENSMUSG00000026238.15	Ptma	chr1	protein_coding	prothymosin alpha
chr1	86454672	86456497	+	86454672;86455734	86455571;86456497	ES	0.5	50	50	ENSMUST00000188699.7	ENSMUSG00000026238.15	Ptma	chr1	protein_coding	prothymosin alpha
chr1	86456966	86457453	+	86456966	86457178	3pMXE	0.5	50	50	ENSMUST00000188699.7	ENSMUSG00000026238.15	Ptma	chr1	protein_coding	prothymosin alpha
chr1	86474504	86475158	-	86474504	86475251	A5SS	0.33	50	50	ENSMUST00000027444.15	ENSMUSG00000026239.15	Pde6d	chr1	protein_coding	phosphodiesterase 6D, cGMP-specific, rod, delta
chr1	86474504	86492267	-	86474504	86475251	A5SS&ES	0.33	50	50	ENSMUST00000027444.15	ENSMUSG00000026239.15	Pde6d	chr1	protein_coding	phosphodiesterase 6D, cGMP-specific, rod, delta
chr1	86474504	86492267	-	86474504	86475158	A5SS&ES	0.33	50	50	ENSMUST00000143674.8	ENSMUSG00000026239.15	Pde6d	chr1	protein_coding	phosphodiesterase 6D, cGMP-specific, rod, delta
chr1	86517063	86524473	+	86517063;86520088	86520013;86524473	ES	0.5	50	50	ENSMUST00000121534.8	ENSMUSG00000026240.13	Cops7b	chr1	protein_coding	COP9 signalosome subunit 7B
chr1	86520088	86526725	+	86520088;86524561	86524473;86526725	ES	0.5	50	50	ENSMUST00000121534.8	ENSMUSG00000026240.13	Cops7b	chr1	protein_coding	COP9 signalosome subunit 7B
chr1	86514957;86515189	86515069;86516886	+	86514957	86516886	cassetteExon	0.5	100	100	ENSMUST00000121534.8	ENSMUSG00000026240.13	Cops7b	chr1	protein_coding	COP9 signalosome subunit 7B
chr1	86524561	86526824	+	86524561	86526725	A3SS	0.5	50	50	ENSMUST00000121534.8	ENSMUSG00000026240.13	Cops7b	chr1	protein_coding	COP9 signalosome subunit 7B
chr1	86517063;86520088	86520013;86526725	+	86517063;86524561	86524473;86526725	MXE	0.5	100	100	ENSMUST00000138280.8	ENSMUSG00000026240.13	Cops7b	chr1	protein_coding	COP9 signalosome subunit 7B
chr1	86673220	86681949	+	86673220	86675251	3pMXE	0.5	50	50	ENSMUST00000188121.7	ENSMUSG00000053333.16	Dis3l2	chr1	protein_coding	DIS3 like 3'-5' exoribonuclease 2
chr1	86688111	86748944	+	86688111;86719179	86719138;86748944	ES	0.33	50	50	ENSMUST00000168237.8	ENSMUSG00000053333.16	Dis3l2	chr1	protein_coding	DIS3 like 3'-5' exoribonuclease 2
chr1	86688111;86740311	86740234;86748944	+	86688111;86719179	86719138;86748944	MXE	0.5	100	100	ENSMUST00000168237.8	ENSMUSG00000053333.16	Dis3l2	chr1	protein_coding	DIS3 like 3'-5' exoribonuclease 2
chr1	86719179;86740311	86740234;86748944	+	86719179	86748944	cassetteExon	0.5	100	100	ENSMUST00000168237.8	ENSMUSG00000053333.16	Dis3l2	chr1	protein_coding	DIS3 like 3'-5' exoribonuclease 2
chr1	86688111	86740234	+	86688111;86719179	86719138;86740234	ES	0.5	50	50	ENSMUST00000189044.7	ENSMUSG00000053333.16	Dis3l2	chr1	protein_coding	DIS3 like 3'-5' exoribonuclease 2
chr1	86688111	86748944	+	86688111;86740311	86740234;86748944	ES	0.33	50	50	ENSMUST00000190618.7	ENSMUSG00000053333.16	Dis3l2	chr1	protein_coding	DIS3 like 3'-5' exoribonuclease 2
chr1	86997340	86997433	+	86997340	86997414	A3SS	0.5	50	50	ENSMUST00000212812.2	ENSMUSG00000101940.3	Akp-ps1	chr1	transcribed_unprocessed_pseudogene	alkaline phosphatase pseudogene 1
chr1	86997752	86997845	+	86997697	86997845	A5SS	0.5	50	50	ENSMUST00000212812.2	ENSMUSG00000101940.3	Akp-ps1	chr1	transcribed_unprocessed_pseudogene	alkaline phosphatase pseudogene 1
chr1	86998065	86998226	+	86998034	86998226	A5SS	0.5	50	50	ENSMUST00000212812.2	ENSMUSG00000101940.3	Akp-ps1	chr1	transcribed_unprocessed_pseudogene	alkaline phosphatase pseudogene 1
chr1	86998341	86998435	+	86998311	86998435	A5SS	0.5	50	50	ENSMUST00000212812.2	ENSMUSG00000101940.3	Akp-ps1	chr1	transcribed_unprocessed_pseudogene	alkaline phosphatase pseudogene 1
chr1	87016846	87017141	-	87016846	87016995	A5SS&ES	0.5	50	50	ENSMUST00000027455.13	ENSMUSG00000026246.13	Alppl2	chr1	protein_coding	alkaline phosphatase, placental-like 2
chr1	87082810	87082909	-	87082810	87083970	A5SS	0.33	50	50	ENSMUST00000161002.8	ENSMUSG00000026247.14	Ecel1	chr1	protein_coding	endothelin converting enzyme-like 1
chr1	87082810	87083742	-	87082810	87083970	A5SS	0.33	50	50	ENSMUST00000161002.8	ENSMUSG00000026247.14	Ecel1	chr1	protein_coding	endothelin converting enzyme-like 1
chr1	87082810	87082909	-	87082810	87083742	A5SS	0.33	50	50	ENSMUST00000160810.2	ENSMUSG00000026247.14	Ecel1	chr1	protein_coding	endothelin converting enzyme-like 1
chr1	87134481	87135930	+	87134481;87135264	87135109;87135930	ES	0.5	50	50	ENSMUST00000185763.7	ENSMUSG00000026253.15	Chrng	chr1	protein_coding	cholinergic receptor, nicotinic, gamma polypeptide
chr1	87133601	87133797	+	87132426	87133797	A5SS	0.5	50	50	ENSMUST00000185763.7	ENSMUSG00000026253.15	Chrng	chr1	protein_coding	cholinergic receptor, nicotinic, gamma polypeptide
chr1	87133936	87134190	+	87134125	87134190	A5SS	0.5	50	50	ENSMUST00000185763.7	ENSMUSG00000026253.15	Chrng	chr1	protein_coding	cholinergic receptor, nicotinic, gamma polypeptide
chr1	87134481	87135930	+	87134481	87135109	A3SS	0.5	50	50	ENSMUST00000189392.2	ENSMUSG00000026253.15	Chrng	chr1	protein_coding	cholinergic receptor, nicotinic, gamma polypeptide
chr1	87141741;87142217	87142068;87147303	+	87141741	87147303	cassetteExon	0.5	100	100	ENSMUST00000113232.8	ENSMUSG00000026254.18	Eif4e2	chr1	protein_coding	eukaryotic translation initiation factor 4E member 2
chr1	87153955	87160125	+	87153955	87155523	3pMXE	0.25	50	50	ENSMUST00000113233.8	ENSMUSG00000026254.18	Eif4e2	chr1	protein_coding	eukaryotic translation initiation factor 4E member 2
chr1	87153955	87160316	+	87153955	87155523	3pMXE	0.25	50	50	ENSMUST00000113233.8	ENSMUSG00000026254.18	Eif4e2	chr1	protein_coding	eukaryotic translation initiation factor 4E member 2
chr1	87153955	87165568	+	87153955	87155523	3pMXE	0.25	50	50	ENSMUST00000113233.8	ENSMUSG00000026254.18	Eif4e2	chr1	protein_coding	eukaryotic translation initiation factor 4E member 2
chr1	87153955	87165568	+	87153955	87160316	3pMXE	0.25	50	50	ENSMUST00000050876.14	ENSMUSG00000026254.18	Eif4e2	chr1	protein_coding	eukaryotic translation initiation factor 4E member 2
chr1	87153955	87160125	+	87153955	87160316	A3SS	0.25	50	50	ENSMUST00000050876.14	ENSMUSG00000026254.18	Eif4e2	chr1	protein_coding	eukaryotic translation initiation factor 4E member 2
chr1	87153955;87160203	87160125;87165568	+	87153955	87165568	cassetteExon	0.5	100	100	ENSMUST00000076362.12	ENSMUSG00000026254.18	Eif4e2	chr1	protein_coding	eukaryotic translation initiation factor 4E member 2
chr1	87141741	87147303	+	87142217	87147303	A5SS	0.5	50	50	ENSMUST00000113230.8	ENSMUSG00000026254.18	Eif4e2	chr1	protein_coding	eukaryotic translation initiation factor 4E member 2
chr1	87237218	87237383	+	87225485	87237383	A5SS	0.5	50	50	ENSMUST00000118687.8	ENSMUSG00000026255.16	Efhd1	chr1	protein_coding	EF hand domain containing 1
chr1	87282208	87291826	+	87282208	87282693	3pMXE	0.33	50	50	ENSMUST00000174846.8	ENSMUSG00000048000.16	Gigyf2	chr1	protein_coding	GRB10 interacting GYF protein 2
chr1	87282208	87282703	+	87282208	87282693	A3SS	0.33	50	50	ENSMUST00000174846.8	ENSMUSG00000048000.16	Gigyf2	chr1	protein_coding	GRB10 interacting GYF protein 2
chr1	87339589	87346810	+	87339589;87344706	87344540;87346810	ES	0.5	50	50	ENSMUST00000027475.15	ENSMUSG00000048000.16	Gigyf2	chr1	protein_coding	GRB10 interacting GYF protein 2
chr1	87368644	87371367	+	87368644;87369887	87369733;87371367	ES	0.5	50	50	ENSMUST00000027475.15	ENSMUSG00000048000.16	Gigyf2	chr1	protein_coding	GRB10 interacting GYF protein 2
chr1	87282208	87282703	+	87282208	87291826	A3SS	0.33	50	50	ENSMUST00000027475.15	ENSMUSG00000048000.16	Gigyf2	chr1	protein_coding	GRB10 interacting GYF protein 2
chr1	87307730	87316773	+	87307730	87331389	A3SS	0.5	50	50	ENSMUST00000027475.15	ENSMUSG00000048000.16	Gigyf2	chr1	protein_coding	GRB10 interacting GYF protein 2
chr1	87331568	87334724	+	87331568	87334706	A3SS	0.5	50	50	ENSMUST00000027475.15	ENSMUSG00000048000.16	Gigyf2	chr1	protein_coding	GRB10 interacting GYF protein 2
chr1	87335177	87335260	+	87335177	87335257	A3SS	0.5	50	50	ENSMUST00000027475.15	ENSMUSG00000048000.16	Gigyf2	chr1	protein_coding	GRB10 interacting GYF protein 2
chr1	87364613	87368082	+	87364613	87368110	A3SS	0.5	50	50	ENSMUST00000027475.15	ENSMUSG00000048000.16	Gigyf2	chr1	protein_coding	GRB10 interacting GYF protein 2
chr1	87314206	87331389	+	87307730	87331389	A5SS	0.25	50	50	ENSMUST00000027475.15	ENSMUSG00000048000.16	Gigyf2	chr1	protein_coding	GRB10 interacting GYF protein 2
chr1	87314352	87331389	+	87307730	87331389	A5SS	0.25	50	50	ENSMUST00000027475.15	ENSMUSG00000048000.16	Gigyf2	chr1	protein_coding	GRB10 interacting GYF protein 2
chr1	87332797	87334706	+	87331568	87334706	A5SS	0.5	50	50	ENSMUST00000027475.15	ENSMUSG00000048000.16	Gigyf2	chr1	protein_coding	GRB10 interacting GYF protein 2
chr1	87360920	87361402	+	87356450	87361402	A5SS	0.5	50	50	ENSMUST00000027475.15	ENSMUSG00000048000.16	Gigyf2	chr1	protein_coding	GRB10 interacting GYF protein 2
chr1	87332797	87334724	+	87331568	87334724	A5SS	0.5	50	50	ENSMUST00000172794.8	ENSMUSG00000048000.16	Gigyf2	chr1	protein_coding	GRB10 interacting GYF protein 2
chr1	87301833	87306694	+	87301833	87331389	A3SS	0.5	50	50	ENSMUST00000164992.9	ENSMUSG00000048000.16	Gigyf2	chr1	protein_coding	GRB10 interacting GYF protein 2
chr1	87307730	87331389	+	87301833	87331389	A5SS	0.25	50	50	ENSMUST00000164992.9	ENSMUSG00000048000.16	Gigyf2	chr1	protein_coding	GRB10 interacting GYF protein 2
chr1	87314206	87331389	+	87301833	87331389	A5SS	0.25	50	50	ENSMUST00000164992.9	ENSMUSG00000048000.16	Gigyf2	chr1	protein_coding	GRB10 interacting GYF protein 2
chr1	87314352	87331389	+	87301833	87331389	A5SS	0.25	50	50	ENSMUST00000164992.9	ENSMUSG00000048000.16	Gigyf2	chr1	protein_coding	GRB10 interacting GYF protein 2
chr1	87314352	87331389	+	87314206	87331389	A5SS	0.25	50	50	ENSMUST00000174535.2	ENSMUSG00000048000.16	Gigyf2	chr1	protein_coding	GRB10 interacting GYF protein 2
chr1	87368644	87371367	+	87368644	87369733	3pMXE	0.5	50	50	ENSMUST00000173235.8	ENSMUSG00000048000.16	Gigyf2	chr1	protein_coding	GRB10 interacting GYF protein 2
chr1	87332797	87334724	+	87332797	87334706	A3SS	0.5	50	50	ENSMUST00000173152.2	ENSMUSG00000048000.16	Gigyf2	chr1	protein_coding	GRB10 interacting GYF protein 2
chr1	87314760	87316888	-	87314760	87316652	A5SS	0.5	50	50	ENSMUST00000113212.4	ENSMUSG00000079436.4	Kcnj13	chr1	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 13
chr1	87400504	87402745	+	87398133	87402745	A5SS	0.5	50	50	ENSMUST00000027476.6	ENSMUSG00000026258.6	Snorc	chr1	protein_coding	secondary ossification center associated regulator of chondrocyte maturation
chr1	87437109	87468381	-	87437109	87437815	5pMXE	0.5	50	50	ENSMUST00000027477.15	ENSMUSG00000026259.15	Ngef	chr1	protein_coding	neuronal guanine nucleotide exchange factor
chr1	87501848	87522600	+	87437937	87522600	A5SS	0.2	50	50	ENSMUST00000166055.8	ENSMUSG00000079434.9	Neu2	chr1	protein_coding	neuraminidase 2
chr1	87507257	87522600	+	87437937	87522600	A5SS	0.2	50	50	ENSMUST00000166055.8	ENSMUSG00000079434.9	Neu2	chr1	protein_coding	neuraminidase 2
chr1	87511971	87522600	+	87437937	87522600	A5SS	0.2	50	50	ENSMUST00000166055.8	ENSMUSG00000079434.9	Neu2	chr1	protein_coding	neuraminidase 2
chr1	87522339	87522600	+	87437937	87522600	A5SS	0.2	50	50	ENSMUST00000166055.8	ENSMUSG00000079434.9	Neu2	chr1	protein_coding	neuraminidase 2
chr1	87501848;87507257	87507156;87522600	+	87501848	87522600	cassetteExon	0.5	100	100	ENSMUST00000166259.8	ENSMUSG00000079434.9	Neu2	chr1	protein_coding	neuraminidase 2
chr1	87511971	87522600	+	87501848	87522600	A5SS	0.2	50	50	ENSMUST00000166259.8	ENSMUSG00000079434.9	Neu2	chr1	protein_coding	neuraminidase 2
chr1	87522339	87522600	+	87501848	87522600	A5SS	0.2	50	50	ENSMUST00000166259.8	ENSMUSG00000079434.9	Neu2	chr1	protein_coding	neuraminidase 2
chr1	87511971	87522600	+	87507257	87522600	A5SS	0.25	50	50	ENSMUST00000172222.8	ENSMUSG00000079434.9	Neu2	chr1	protein_coding	neuraminidase 2
chr1	87522339	87522600	+	87507257	87522600	A5SS	0.25	50	50	ENSMUST00000172222.8	ENSMUSG00000079434.9	Neu2	chr1	protein_coding	neuraminidase 2
chr1	87522339	87522600	+	87511971	87522600	A5SS	0.2	50	50	ENSMUST00000164128.2	ENSMUSG00000079434.9	Neu2	chr1	protein_coding	neuraminidase 2
chr1	87563077	87570704	+	87563077	87593109	A3SS	0.5	50	50	ENSMUST00000169754.8	ENSMUSG00000026288.15	Inpp5d	chr1	protein_coding	inositol polyphosphate-5-phosphatase D
chr1	87593259	87595614	+	87593259	87595611	A3SS	0.5	50	50	ENSMUST00000169754.8	ENSMUSG00000026288.15	Inpp5d	chr1	protein_coding	inositol polyphosphate-5-phosphatase D
chr1	87548399	87563014	+	87548353	87563014	A5SS	0.33	50	50	ENSMUST00000169754.8	ENSMUSG00000026288.15	Inpp5d	chr1	protein_coding	inositol polyphosphate-5-phosphatase D
chr1	87549496	87563014	+	87548353	87563014	A5SS	0.33	50	50	ENSMUST00000169754.8	ENSMUSG00000026288.15	Inpp5d	chr1	protein_coding	inositol polyphosphate-5-phosphatase D
chr1	87642815	87642999	+	87642815	87642983	A3SS	0.5	50	50	ENSMUST00000072999.13	ENSMUSG00000026288.15	Inpp5d	chr1	protein_coding	inositol polyphosphate-5-phosphatase D
chr1	87549496	87563014	+	87548399	87563014	A5SS	0.33	50	50	ENSMUST00000165554.2	ENSMUSG00000026288.15	Inpp5d	chr1	protein_coding	inositol polyphosphate-5-phosphatase D
chr1	87684036	87687773	+	87683807	87687773	A5SS	0.5	50	50	ENSMUST00000144047.8	ENSMUSG00000026289.16	Atg16l1	chr1	protein_coding	autophagy related 16-like 1 (S. cerevisiae)
chr1	87701953	87703479	+	87701953;87702591	87702535;87703479	ES	0.33	50	50	ENSMUST00000027512.13	ENSMUSG00000026289.16	Atg16l1	chr1	protein_coding	autophagy related 16-like 1 (S. cerevisiae)
chr1	87702591;87702850	87702803;87703479	+	87702591	87703479	cassetteExon	0.5	100	100	ENSMUST00000027512.13	ENSMUSG00000026289.16	Atg16l1	chr1	protein_coding	autophagy related 16-like 1 (S. cerevisiae)
chr1	87701953;87702850	87702535;87703479	+	87701953	87703479	cassetteExon	0.5	100	100	ENSMUST00000137638.8	ENSMUSG00000026289.16	Atg16l1	chr1	protein_coding	autophagy related 16-like 1 (S. cerevisiae)
chr1	87701953	87703479	+	87701953	87702535	3pMXE	0.5	50	50	ENSMUST00000129431.2	ENSMUSG00000026289.16	Atg16l1	chr1	protein_coding	autophagy related 16-like 1 (S. cerevisiae)
chr1	87740113	87740707	+	87738089	87740707	A5SS	0.5	50	50	ENSMUST00000156381.8	ENSMUSG00000056055.14	Sag	chr1	protein_coding	S-antigen, retina and pineal gland (arrestin)
chr1	87756191	87759563	+	87756191	87759561	A3SS	0.5	50	50	ENSMUST00000155393.8	ENSMUSG00000056055.14	Sag	chr1	protein_coding	S-antigen, retina and pineal gland (arrestin)
chr1	87768569	87771834	+	87768569	87772591	A3SS	0.5	50	50	ENSMUST00000177757.2	ENSMUSG00000056055.14	Sag	chr1	protein_coding	S-antigen, retina and pineal gland (arrestin)
chr1	87862223	87864006	+	87862223;87863173	87863060;87864006	ES	0.5	50	50	ENSMUST00000027517.14	ENSMUSG00000070738.11	Dgkd	chr1	protein_coding	diacylglycerol kinase, delta
chr1	87868028	87870105	+	87868028;87869221	87869091;87870105	ES	0.5	50	50	ENSMUST00000027517.14	ENSMUSG00000070738.11	Dgkd	chr1	protein_coding	diacylglycerol kinase, delta
chr1	87868028	87872214	+	87868028	87870105	A3SS	0.33	50	50	ENSMUST00000190061.7	ENSMUSG00000070738.11	Dgkd	chr1	protein_coding	diacylglycerol kinase, delta
chr1	87862223	87864006	+	87863173	87864006	5pMXE	0.5	50	50	ENSMUST00000189726.2	ENSMUSG00000070738.11	Dgkd	chr1	protein_coding	diacylglycerol kinase, delta
chr1	87868028	87869091	+	87868028	87872214	A3SS	0.33	50	50	ENSMUST00000189448.2	ENSMUSG00000070738.11	Dgkd	chr1	protein_coding	diacylglycerol kinase, delta
chr1	87890210;87901856	87901799;87903530	-	87890210;87895320	87893028;87903530	MXE	0.5	100	100	ENSMUST00000189409.7	ENSMUSG00000005501.15	Usp40	chr1	protein_coding	ubiquitin specific peptidase 40
chr1	87895320	87896118	-	87895320	87903530	A5SS	0.5	50	50	ENSMUST00000189409.7	ENSMUSG00000005501.15	Usp40	chr1	protein_coding	ubiquitin specific peptidase 40
chr1	87932036;87932813	87932682;87934947	-	87932036	87934947	cassetteExon	0.5	100	100	ENSMUST00000040783.11	ENSMUSG00000005501.15	Usp40	chr1	protein_coding	ubiquitin specific peptidase 40
chr1	87895320	87903530	-	87901856	87903530	A3SS&ES	0.5	50	50	ENSMUST00000040783.11	ENSMUSG00000005501.15	Usp40	chr1	protein_coding	ubiquitin specific peptidase 40
chr1	87896171	87901799	-	87890210	87901799	A3SS	0.5	50	50	ENSMUST00000040783.11	ENSMUSG00000005501.15	Usp40	chr1	protein_coding	ubiquitin specific peptidase 40
chr1	87890210	87893028	-	87890210	87901799	A5SS	0.5	50	50	ENSMUST00000040783.11	ENSMUSG00000005501.15	Usp40	chr1	protein_coding	ubiquitin specific peptidase 40
chr1	88142897	88143860	+	88142897;88143604	88143517;88143860	ES	0.5	50	50	ENSMUST00000138182.8	ENSMUSG00000090165.9	Ugt1a10	chr1	protein_coding	UDP glycosyltransferase 1 family, polypeptide A10
chr1	87983386;87984058	87983984;88142766	+	87983386	88142766	cassetteExon	0.5	100	100	ENSMUST00000138182.8	ENSMUSG00000090165.9	Ugt1a10	chr1	protein_coding	UDP glycosyltransferase 1 family, polypeptide A10
chr1	87999400	88142766	+	87983386	88142766	A5SS	0.09	50	50	ENSMUST00000138182.8	ENSMUSG00000090165.9	Ugt1a10	chr1	protein_coding	UDP glycosyltransferase 1 family, polypeptide A10
chr1	88016443	88142766	+	87983386	88142766	A5SS	0.09	50	50	ENSMUST00000138182.8	ENSMUSG00000090165.9	Ugt1a10	chr1	protein_coding	UDP glycosyltransferase 1 family, polypeptide A10
chr1	88023025	88142766	+	87983386	88142766	A5SS	0.09	50	50	ENSMUST00000138182.8	ENSMUSG00000090165.9	Ugt1a10	chr1	protein_coding	UDP glycosyltransferase 1 family, polypeptide A10
chr1	88023700	88142766	+	87983386	88142766	A5SS	0.09	50	50	ENSMUST00000138182.8	ENSMUSG00000090165.9	Ugt1a10	chr1	protein_coding	UDP glycosyltransferase 1 family, polypeptide A10
chr1	88035521	88142766	+	87983386	88142766	A5SS	0.09	50	50	ENSMUST00000138182.8	ENSMUSG00000090165.9	Ugt1a10	chr1	protein_coding	UDP glycosyltransferase 1 family, polypeptide A10
chr1	88067053	88142766	+	87983386	88142766	A5SS	0.09	50	50	ENSMUST00000138182.8	ENSMUSG00000090165.9	Ugt1a10	chr1	protein_coding	UDP glycosyltransferase 1 family, polypeptide A10
chr1	88094625	88142766	+	87983386	88142766	A5SS	0.09	50	50	ENSMUST00000138182.8	ENSMUSG00000090165.9	Ugt1a10	chr1	protein_coding	UDP glycosyltransferase 1 family, polypeptide A10
chr1	88129222	88142766	+	87983386	88142766	A5SS	0.09	50	50	ENSMUST00000138182.8	ENSMUSG00000090165.9	Ugt1a10	chr1	protein_coding	UDP glycosyltransferase 1 family, polypeptide A10
chr1	88140593	88142766	+	87983386	88142766	A5SS	0.09	50	50	ENSMUST00000138182.8	ENSMUSG00000090165.9	Ugt1a10	chr1	protein_coding	UDP glycosyltransferase 1 family, polypeptide A10
chr1	87983386	88142766	+	87984058	88142766	A5SS	0.09	50	50	ENSMUST00000113142.10	ENSMUSG00000090165.9	Ugt1a10	chr1	protein_coding	UDP glycosyltransferase 1 family, polypeptide A10
chr1	87999400	88142766	+	87984058	88142766	A5SS	0.09	50	50	ENSMUST00000113142.10	ENSMUSG00000090165.9	Ugt1a10	chr1	protein_coding	UDP glycosyltransferase 1 family, polypeptide A10
chr1	88016443	88142766	+	87984058	88142766	A5SS	0.09	50	50	ENSMUST00000113142.10	ENSMUSG00000090165.9	Ugt1a10	chr1	protein_coding	UDP glycosyltransferase 1 family, polypeptide A10
chr1	88023025	88142766	+	87984058	88142766	A5SS	0.09	50	50	ENSMUST00000113142.10	ENSMUSG00000090165.9	Ugt1a10	chr1	protein_coding	UDP glycosyltransferase 1 family, polypeptide A10
chr1	88023700	88142766	+	87984058	88142766	A5SS	0.09	50	50	ENSMUST00000113142.10	ENSMUSG00000090165.9	Ugt1a10	chr1	protein_coding	UDP glycosyltransferase 1 family, polypeptide A10
chr1	88035521	88142766	+	87984058	88142766	A5SS	0.09	50	50	ENSMUST00000113142.10	ENSMUSG00000090165.9	Ugt1a10	chr1	protein_coding	UDP glycosyltransferase 1 family, polypeptide A10
chr1	88067053	88142766	+	87984058	88142766	A5SS	0.09	50	50	ENSMUST00000113142.10	ENSMUSG00000090165.9	Ugt1a10	chr1	protein_coding	UDP glycosyltransferase 1 family, polypeptide A10
chr1	88094625	88142766	+	87984058	88142766	A5SS	0.09	50	50	ENSMUST00000113142.10	ENSMUSG00000090165.9	Ugt1a10	chr1	protein_coding	UDP glycosyltransferase 1 family, polypeptide A10
chr1	88129222	88142766	+	87984058	88142766	A5SS	0.09	50	50	ENSMUST00000113142.10	ENSMUSG00000090165.9	Ugt1a10	chr1	protein_coding	UDP glycosyltransferase 1 family, polypeptide A10
chr1	88140593	88142766	+	87984058	88142766	A5SS	0.09	50	50	ENSMUST00000113142.10	ENSMUSG00000090165.9	Ugt1a10	chr1	protein_coding	UDP glycosyltransferase 1 family, polypeptide A10
chr1	88016443	88142766	+	87999400	88142766	A5SS	0.09	50	50	ENSMUST00000073772.5	ENSMUSG00000090175.2	Ugt1a9	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A9
chr1	88023025	88142766	+	87999400	88142766	A5SS	0.09	50	50	ENSMUST00000073772.5	ENSMUSG00000090175.2	Ugt1a9	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A9
chr1	88023700	88142766	+	87999400	88142766	A5SS	0.09	50	50	ENSMUST00000073772.5	ENSMUSG00000090175.2	Ugt1a9	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A9
chr1	88035521	88142766	+	87999400	88142766	A5SS	0.09	50	50	ENSMUST00000073772.5	ENSMUSG00000090175.2	Ugt1a9	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A9
chr1	88067053	88142766	+	87999400	88142766	A5SS	0.09	50	50	ENSMUST00000073772.5	ENSMUSG00000090175.2	Ugt1a9	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A9
chr1	88094625	88142766	+	87999400	88142766	A5SS	0.09	50	50	ENSMUST00000073772.5	ENSMUSG00000090175.2	Ugt1a9	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A9
chr1	88129222	88142766	+	87999400	88142766	A5SS	0.09	50	50	ENSMUST00000073772.5	ENSMUSG00000090175.2	Ugt1a9	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A9
chr1	88140593	88142766	+	87999400	88142766	A5SS	0.09	50	50	ENSMUST00000073772.5	ENSMUSG00000090175.2	Ugt1a9	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A9
chr1	88023025	88142766	+	88016443	88142766	A5SS	0.09	50	50	ENSMUST00000113139.2	ENSMUSG00000089675.2	Ugt1a8	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A8
chr1	88023700	88142766	+	88016443	88142766	A5SS	0.09	50	50	ENSMUST00000113139.2	ENSMUSG00000089675.2	Ugt1a8	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A8
chr1	88035521	88142766	+	88016443	88142766	A5SS	0.09	50	50	ENSMUST00000113139.2	ENSMUSG00000089675.2	Ugt1a8	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A8
chr1	88067053	88142766	+	88016443	88142766	A5SS	0.09	50	50	ENSMUST00000113139.2	ENSMUSG00000089675.2	Ugt1a8	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A8
chr1	88094625	88142766	+	88016443	88142766	A5SS	0.09	50	50	ENSMUST00000113139.2	ENSMUSG00000089675.2	Ugt1a8	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A8
chr1	88129222	88142766	+	88016443	88142766	A5SS	0.09	50	50	ENSMUST00000113139.2	ENSMUSG00000089675.2	Ugt1a8	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A8
chr1	88140593	88142766	+	88016443	88142766	A5SS	0.09	50	50	ENSMUST00000113139.2	ENSMUSG00000089675.2	Ugt1a8	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A8
chr1	88023700	88142766	+	88023025	88142766	A5SS	0.09	50	50	ENSMUST00000150634.8	ENSMUSG00000090124.8	Ugt1a7c	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A7C
chr1	88035521	88142766	+	88023025	88142766	A5SS	0.09	50	50	ENSMUST00000150634.8	ENSMUSG00000090124.8	Ugt1a7c	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A7C
chr1	88067053	88142766	+	88023025	88142766	A5SS	0.09	50	50	ENSMUST00000150634.8	ENSMUSG00000090124.8	Ugt1a7c	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A7C
chr1	88094625	88142766	+	88023025	88142766	A5SS	0.09	50	50	ENSMUST00000150634.8	ENSMUSG00000090124.8	Ugt1a7c	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A7C
chr1	88129222	88142766	+	88023025	88142766	A5SS	0.09	50	50	ENSMUST00000150634.8	ENSMUSG00000090124.8	Ugt1a7c	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A7C
chr1	88140593	88142766	+	88023025	88142766	A5SS	0.09	50	50	ENSMUST00000150634.8	ENSMUSG00000090124.8	Ugt1a7c	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A7C
chr1	88035521	88142766	+	88023700	88142766	A5SS	0.09	50	50	ENSMUST00000058237.14	ENSMUSG00000090124.8	Ugt1a7c	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A7C
chr1	88067053	88142766	+	88023700	88142766	A5SS	0.09	50	50	ENSMUST00000058237.14	ENSMUSG00000090124.8	Ugt1a7c	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A7C
chr1	88094625	88142766	+	88023700	88142766	A5SS	0.09	50	50	ENSMUST00000058237.14	ENSMUSG00000090124.8	Ugt1a7c	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A7C
chr1	88129222	88142766	+	88023700	88142766	A5SS	0.09	50	50	ENSMUST00000058237.14	ENSMUSG00000090124.8	Ugt1a7c	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A7C
chr1	88140593	88142766	+	88023700	88142766	A5SS	0.09	50	50	ENSMUST00000058237.14	ENSMUSG00000090124.8	Ugt1a7c	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A7C
chr1	88031100	88034663	+	88031100	88066195	A3SS	0.5	50	50	ENSMUST00000113135.6	ENSMUSG00000090124.8	Ugt1a7c	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A7C
chr1	88035521	88142766	+	88067053	88142766	A5SS&ES	0.2	50	50	ENSMUST00000113135.6	ENSMUSG00000090124.8	Ugt1a7c	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A7C
chr1	88062657	88066195	+	88031100	88066195	A5SS	0.5	50	50	ENSMUST00000113135.6	ENSMUSG00000090124.8	Ugt1a7c	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A7C
chr1	88094625	88142766	+	88067053	88142766	A5SS	0.2	50	50	ENSMUST00000113135.6	ENSMUSG00000090124.8	Ugt1a7c	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A7C
chr1	88129222	88142766	+	88067053	88142766	A5SS	0.2	50	50	ENSMUST00000113135.6	ENSMUSG00000090124.8	Ugt1a7c	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A7C
chr1	88140593	88142766	+	88067053	88142766	A5SS	0.2	50	50	ENSMUST00000113135.6	ENSMUSG00000090124.8	Ugt1a7c	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A7C
chr1	88094625	88142766	+	88035521	88142766	A5SS	0.2	50	50	ENSMUST00000113138.8	ENSMUSG00000090145.8	Ugt1a6b	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A6B
chr1	88129222	88142766	+	88035521	88142766	A5SS	0.2	50	50	ENSMUST00000113138.8	ENSMUSG00000090145.8	Ugt1a6b	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A6B
chr1	88140593	88142766	+	88035521	88142766	A5SS	0.2	50	50	ENSMUST00000113138.8	ENSMUSG00000090145.8	Ugt1a6b	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A6B
chr1	88062657	88066940	+	88062657	88066195	A3SS	0.5	50	50	ENSMUST00000113134.8	ENSMUSG00000054545.18	Ugt1a6a	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A6A
chr1	88129222	88142766	+	88094625	88142766	A5SS	0.09	50	50	ENSMUST00000097659.5	ENSMUSG00000089943.2	Ugt1a5	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A5
chr1	88140593	88142766	+	88094625	88142766	A5SS	0.09	50	50	ENSMUST00000097659.5	ENSMUSG00000089943.2	Ugt1a5	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A5
chr1	88140593	88142766	+	88129222	88142766	A5SS	0.09	50	50	ENSMUST00000049289.9	ENSMUSG00000090171.2	Ugt1a2	chr1	protein_coding	UDP glucuronosyltransferase 1 family, polypeptide A2
chr1	88154950	88155776	+	88154950	88155785	A3SS	0.5	50	50	ENSMUST00000148474.2	ENSMUSG00000079429.10	Mroh2a	chr1	protein_coding	maestro heat-like repeat family member 2A
chr1	88156130	88158064	+	88156130	88161039	A3SS	0.5	50	50	ENSMUST00000148474.2	ENSMUSG00000079429.10	Mroh2a	chr1	protein_coding	maestro heat-like repeat family member 2A
chr1	88160064	88161039	+	88156130	88161039	A5SS	0.5	50	50	ENSMUST00000148474.2	ENSMUSG00000079429.10	Mroh2a	chr1	protein_coding	maestro heat-like repeat family member 2A
chr1	88186430	88186841	+	88186436	88186841	A5SS	0.5	50	50	ENSMUST00000061013.13	ENSMUSG00000079429.10	Mroh2a	chr1	protein_coding	maestro heat-like repeat family member 2A
chr1	88194380	88197043	-	88194380;88195748	88195670;88197043	ES	0.5	50	50	ENSMUST00000054674.15	ENSMUSG00000044783.17	Hjurp	chr1	protein_coding	Holliday junction recognition protein
chr1	88195748	88202750	-	88195748	88197043	A5SS&ES	0.33	50	50	ENSMUST00000054674.15	ENSMUSG00000044783.17	Hjurp	chr1	protein_coding	Holliday junction recognition protein
chr1	88200487	88202764	-	88195748	88202764	A3SS	0.5	50	50	ENSMUST00000065420.12	ENSMUSG00000044783.17	Hjurp	chr1	protein_coding	Holliday junction recognition protein
chr1	88194380	88197043	-	88194380	88195670	A5SS&ES	0.5	50	50	ENSMUST00000065420.12	ENSMUSG00000044783.17	Hjurp	chr1	protein_coding	Holliday junction recognition protein
chr1	88195748	88197043	-	88195748	88202764	A5SS	0.33	50	50	ENSMUST00000065420.12	ENSMUSG00000044783.17	Hjurp	chr1	protein_coding	Holliday junction recognition protein
chr1	88195748	88202750	-	88195748	88202764	A5SS	0.33	50	50	ENSMUST00000065420.12	ENSMUSG00000044783.17	Hjurp	chr1	protein_coding	Holliday junction recognition protein
chr1	88235624	88246687	+	88235624	88235732	3pMXE	0.5	50	50	ENSMUST00000148138.8	ENSMUSG00000036251.17	Trpm8	chr1	protein_coding	transient receptor potential cation channel, subfamily M, member 8
chr1	88234513	88246687	+	88234513;88235624	88235532;88246687	ES	0.5	50	50	ENSMUST00000113114.10	ENSMUSG00000036251.17	Trpm8	chr1	protein_coding	transient receptor potential cation channel, subfamily M, member 8
chr1	88338950	88344960	+	88338950;88340080	88339973;88344960	ES	0.5	50	50	ENSMUST00000027518.12	ENSMUSG00000026295.13	Spp2	chr1	protein_coding	secreted phosphoprotein 2
chr1	88345014	88348279	+	88345014	88346109	A3SS&ES	0.5	50	50	ENSMUST00000027518.12	ENSMUSG00000026295.13	Spp2	chr1	protein_coding	secreted phosphoprotein 2
chr1	89035058	89040466	+	89035058	89065281	A3SS	0.5	50	50	ENSMUST00000066279.11	ENSMUSG00000036206.13	Sh3bp4	chr1	protein_coding	SH3-domain binding protein 4
chr1	89671618	89716885	+	89671618;89694186	89694028;89716885	ES	0.5	50	50	ENSMUST00000027521.15	ENSMUSG00000055013.17	Agap1	chr1	protein_coding	ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
chr1	89537305;89538017	89538006;89555483	+	89537305	89555483	cassetteExon	0.5	100	100	ENSMUST00000027521.15	ENSMUSG00000055013.17	Agap1	chr1	protein_coding	ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
chr1	89717046;89751656	89751579;89762156	+	89717046	89762156	cassetteExon	0.5	100	100	ENSMUST00000027521.15	ENSMUSG00000055013.17	Agap1	chr1	protein_coding	ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
chr1	89509375	89532320	+	89383314	89532320	A5SS	0.5	50	50	ENSMUST00000027521.15	ENSMUSG00000055013.17	Agap1	chr1	protein_coding	ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
chr1	89607826	89608878	-	89582841	89608878	A3SS	0.5	50	50	ENSMUST00000186098.7	ENSMUSG00000102009.7	4933400F21Rik	chr1	lncRNA	RIKEN cDNA 4933400F21 gene
chr1	89882224	89920680	-	89882224;89896442	89895935;89920680	ES	0.5	50	50	ENSMUST00000238685.2	ENSMUSG00000067081.14	Asb18	chr1	protein_coding	ankyrin repeat and SOCS box-containing 18
chr1	89920947	89942095	-	89920947	89923934	5pMXE	0.5	50	50	ENSMUST00000238685.2	ENSMUSG00000067081.14	Asb18	chr1	protein_coding	ankyrin repeat and SOCS box-containing 18
chr1	89920947	89942095	-	89920947;89924056	89923934;89942095	ES	0.5	50	50	ENSMUST00000086882.8	ENSMUSG00000067081.14	Asb18	chr1	protein_coding	ankyrin repeat and SOCS box-containing 18
chr1	89895997	89920905	-	89895997;89918315	89918315;89920905	ES	0.5	50	0	ENSMUST00000097656.10	ENSMUSG00000067081.14	Asb18	chr1	protein_coding	ankyrin repeat and SOCS box-containing 18
chr1	89918315	89920905	-	89918315	89920905	A3SS	0.5	50	0	ENSMUST00000097656.10	ENSMUSG00000067081.14	Asb18	chr1	protein_coding	ankyrin repeat and SOCS box-containing 18
chr1	89882224	89920680	-	89882224	89895935	A5SS&ES	0.5	50	50	ENSMUST00000097656.10	ENSMUSG00000067081.14	Asb18	chr1	protein_coding	ankyrin repeat and SOCS box-containing 18
chr1	89895997	89918315	-	89895997	89918315	A5SS	0.5	50	0	ENSMUST00000097656.10	ENSMUSG00000067081.14	Asb18	chr1	protein_coding	ankyrin repeat and SOCS box-containing 18
chr1	89896442	89920680	-	89882224	89920680	A3SS	0.5	50	50	ENSMUST00000154228.8	ENSMUSG00000067081.14	Asb18	chr1	protein_coding	ankyrin repeat and SOCS box-containing 18
chr1	89918315	89920905	-	89895997	89920905	A3SS	0.5	50	50	ENSMUST00000151330.2	ENSMUSG00000067081.14	Asb18	chr1	protein_coding	ankyrin repeat and SOCS box-containing 18
chr1	89895997	89918315	-	89895997	89920905	A5SS	0.5	50	50	ENSMUST00000151330.2	ENSMUSG00000067081.14	Asb18	chr1	protein_coding	ankyrin repeat and SOCS box-containing 18
chr1	90067796	90072543	-	90067796;90070514	90070398;90072543	ES	0.5	50	50	ENSMUST00000113094.9	ENSMUSG00000026301.17	Iqca	chr1	protein_coding	IQ motif containing with AAA domain
chr1	90001551;90006845	90006736;90008582	-	90001551;90005596	90005529;90008582	MXE	0.5	100	100	ENSMUST00000113094.9	ENSMUSG00000026301.17	Iqca	chr1	protein_coding	IQ motif containing with AAA domain
chr1	89987352	89994447	-	89980196	89994447	A3SS	0.5	50	50	ENSMUST00000113094.9	ENSMUSG00000026301.17	Iqca	chr1	protein_coding	IQ motif containing with AAA domain
chr1	90010085	90017197	-	90009144	90017197	A3SS	0.5	50	50	ENSMUST00000113094.9	ENSMUSG00000026301.17	Iqca	chr1	protein_coding	IQ motif containing with AAA domain
chr1	90055197	90057775	-	90031629	90057775	A3SS	0.5	50	50	ENSMUST00000113094.9	ENSMUSG00000026301.17	Iqca	chr1	protein_coding	IQ motif containing with AAA domain
chr1	89973552	89975496	-	89973552	89975511	A5SS	0.5	50	50	ENSMUST00000113094.9	ENSMUSG00000026301.17	Iqca	chr1	protein_coding	IQ motif containing with AAA domain
chr1	89980196	89982584	-	89980196	89994447	A5SS	0.5	50	50	ENSMUST00000113094.9	ENSMUSG00000026301.17	Iqca	chr1	protein_coding	IQ motif containing with AAA domain
chr1	90017272	90017654	-	90017272	90025660	A5SS	0.33	50	50	ENSMUST00000113094.9	ENSMUSG00000026301.17	Iqca	chr1	protein_coding	IQ motif containing with AAA domain
chr1	90017272	90025633	-	90017272	90025660	A5SS	0.33	50	50	ENSMUST00000113094.9	ENSMUSG00000026301.17	Iqca	chr1	protein_coding	IQ motif containing with AAA domain
chr1	90017272	90025633	-	90017272	90017654	5pMXE	0.33	50	50	ENSMUST00000189690.7	ENSMUSG00000026301.17	Iqca	chr1	protein_coding	IQ motif containing with AAA domain
chr1	90131809;90137592	90137310;90141517	+	90131809	90141517	cassetteExon	0.5	100	100	ENSMUST00000065587.5	ENSMUSG00000044337.6	Ackr3	chr1	protein_coding	atypical chemokine receptor 3
chr1	90531349	90533186	+	90531349;90532167	90532097;90533186	ES	0.5	50	50	ENSMUST00000036153.12	ENSMUSG00000034432.12	Cops8	chr1	protein_coding	COP9 signalosome subunit 8
chr1	90533234	90537815	+	90533234;90534391	90534259;90537815	ES	0.5	50	50	ENSMUST00000036153.12	ENSMUSG00000034432.12	Cops8	chr1	protein_coding	COP9 signalosome subunit 8
chr1	90539309;90539789	90539734;90539896	+	90539309	90539896	cassetteExon	0.5	100	100	ENSMUST00000036153.12	ENSMUSG00000034432.12	Cops8	chr1	protein_coding	COP9 signalosome subunit 8
chr1	90531349	90533186	+	90531349	90532097	A3SS	0.5	50	50	ENSMUST00000191510.7	ENSMUSG00000034432.12	Cops8	chr1	protein_coding	COP9 signalosome subunit 8
chr1	90695327	90696046	-	90693655	90696046	A3SS	0.5	50	50	ENSMUST00000188587.7	ENSMUSG00000048126.17	Col6a3	chr1	protein_coding	collagen, type VI, alpha 3
chr1	90741536	90743673	-	90739553	90743673	A3SS	0.5	50	50	ENSMUST00000188587.7	ENSMUSG00000048126.17	Col6a3	chr1	protein_coding	collagen, type VI, alpha 3
chr1	90750126	90757865	-	90744257	90757865	A3SS	0.33	50	50	ENSMUST00000188587.7	ENSMUSG00000048126.17	Col6a3	chr1	protein_coding	collagen, type VI, alpha 3
chr1	90756199	90757865	-	90744257	90757865	A3SS	0.33	50	50	ENSMUST00000188587.7	ENSMUSG00000048126.17	Col6a3	chr1	protein_coding	collagen, type VI, alpha 3
chr1	90739553	90740937	-	90739553	90743673	A5SS	0.5	50	50	ENSMUST00000188587.7	ENSMUSG00000048126.17	Col6a3	chr1	protein_coding	collagen, type VI, alpha 3
chr1	90744257	90749524	-	90744257	90757865	A5SS	0.5	50	50	ENSMUST00000188587.7	ENSMUSG00000048126.17	Col6a3	chr1	protein_coding	collagen, type VI, alpha 3
chr1	90739553	90743673	-	90739553;90741536	90740937;90743673	ES	0.5	50	50	ENSMUST00000056925.16	ENSMUSG00000048126.17	Col6a3	chr1	protein_coding	collagen, type VI, alpha 3
chr1	90750126	90757865	-	90750126;90756199	90755582;90757865	ES	0.33	50	50	ENSMUST00000056925.16	ENSMUSG00000048126.17	Col6a3	chr1	protein_coding	collagen, type VI, alpha 3
chr1	90756199	90757865	-	90750126	90757865	A3SS	0.33	50	50	ENSMUST00000187753.2	ENSMUSG00000048126.17	Col6a3	chr1	protein_coding	collagen, type VI, alpha 3
chr1	90750126	90755582	-	90750126	90757865	A5SS	0.5	50	50	ENSMUST00000187753.2	ENSMUSG00000048126.17	Col6a3	chr1	protein_coding	collagen, type VI, alpha 3
chr1	90888984	90896952	-	90888984;90892025	90891866;90896952	ES	0.5	50	50	ENSMUST00000027529.12	ENSMUSG00000026304.14	Rab17	chr1	protein_coding	RAB17, member RAS oncogene family
chr1	90888984	90895230	-	90888984	90891866	A5SS&ES	0.33	50	50	ENSMUST00000027529.12	ENSMUSG00000026304.14	Rab17	chr1	protein_coding	RAB17, member RAS oncogene family
chr1	90892025	90895230	-	90892025	90896952	A5SS	0.5	50	50	ENSMUST00000027529.12	ENSMUSG00000026304.14	Rab17	chr1	protein_coding	RAB17, member RAS oncogene family
chr1	90888984	90895230	-	90888984;90892025	90891866;90895230	ES	0.5	50	50	ENSMUST00000131428.8	ENSMUSG00000026304.14	Rab17	chr1	protein_coding	RAB17, member RAS oncogene family
chr1	90888984	90895230	-	90888984	90896952	A5SS	0.33	50	50	ENSMUST00000128226.8	ENSMUSG00000026304.14	Rab17	chr1	protein_coding	RAB17, member RAS oncogene family
chr1	91035112	91039878	+	91035112	91036302	3pMXE	0.5	50	50	ENSMUST00000189505.7	ENSMUSG00000026305.16	Lrrfip1	chr1	protein_coding	leucine rich repeat (in FLII) interacting protein 1
chr1	91006803;91009901	91009863;91012668	+	91006803	91012668	cassetteExon	0.5	100	100	ENSMUST00000189505.7	ENSMUSG00000026305.16	Lrrfip1	chr1	protein_coding	leucine rich repeat (in FLII) interacting protein 1
chr1	91029032;91031040	91030969;91032849	+	91029032	91032849	cassetteExon	0.5	100	100	ENSMUST00000189505.7	ENSMUSG00000026305.16	Lrrfip1	chr1	protein_coding	leucine rich repeat (in FLII) interacting protein 1
chr1	91012727	91014781	+	91012727	91021282	A3SS	0.33	50	50	ENSMUST00000189505.7	ENSMUSG00000026305.16	Lrrfip1	chr1	protein_coding	leucine rich repeat (in FLII) interacting protein 1
chr1	91012727	91016356	+	91012727	91021282	A3SS	0.33	50	50	ENSMUST00000189505.7	ENSMUSG00000026305.16	Lrrfip1	chr1	protein_coding	leucine rich repeat (in FLII) interacting protein 1
chr1	90981445	90996285	+	90926615	90996285	A5SS	0.5	50	50	ENSMUST00000189505.7	ENSMUSG00000026305.16	Lrrfip1	chr1	protein_coding	leucine rich repeat (in FLII) interacting protein 1
chr1	90996419	91004666	+	91001063	91004666	A5SS&ES	0.5	50	50	ENSMUST00000189505.7	ENSMUSG00000026305.16	Lrrfip1	chr1	protein_coding	leucine rich repeat (in FLII) interacting protein 1
chr1	91019389	91021282	+	91012727	91021282	A5SS	0.5	50	50	ENSMUST00000189505.7	ENSMUSG00000026305.16	Lrrfip1	chr1	protein_coding	leucine rich repeat (in FLII) interacting protein 1
chr1	91012727	91016356	+	91012727;91014846	91014781;91016356	ES	0.5	50	50	ENSMUST00000185531.7	ENSMUSG00000026305.16	Lrrfip1	chr1	protein_coding	leucine rich repeat (in FLII) interacting protein 1
chr1	91040019	91040375	+	91040019	91047863	A3SS	0.33	50	50	ENSMUST00000185531.7	ENSMUSG00000026305.16	Lrrfip1	chr1	protein_coding	leucine rich repeat (in FLII) interacting protein 1
chr1	91040019	91042318	+	91040019	91047863	A3SS	0.33	50	50	ENSMUST00000185531.7	ENSMUSG00000026305.16	Lrrfip1	chr1	protein_coding	leucine rich repeat (in FLII) interacting protein 1
chr1	91039047	91039878	+	91038169	91039878	A5SS	0.33	50	50	ENSMUST00000185531.7	ENSMUSG00000026305.16	Lrrfip1	chr1	protein_coding	leucine rich repeat (in FLII) interacting protein 1
chr1	91047742	91047863	+	91040019	91047863	A5SS	0.5	50	50	ENSMUST00000185531.7	ENSMUSG00000026305.16	Lrrfip1	chr1	protein_coding	leucine rich repeat (in FLII) interacting protein 1
chr1	90996371	91001046	+	90996371	91028299	A3SS	0.33	50	50	ENSMUST00000068116.13	ENSMUSG00000026305.16	Lrrfip1	chr1	protein_coding	leucine rich repeat (in FLII) interacting protein 1
chr1	90996371	91012668	+	90996371	91028299	A3SS	0.33	50	50	ENSMUST00000068116.13	ENSMUSG00000026305.16	Lrrfip1	chr1	protein_coding	leucine rich repeat (in FLII) interacting protein 1
chr1	91021359	91028299	+	90996371	91028299	A5SS	0.5	50	50	ENSMUST00000068116.13	ENSMUSG00000026305.16	Lrrfip1	chr1	protein_coding	leucine rich repeat (in FLII) interacting protein 1
chr1	91038169	91039878	+	91035112	91039878	A5SS	0.33	50	50	ENSMUST00000068116.13	ENSMUSG00000026305.16	Lrrfip1	chr1	protein_coding	leucine rich repeat (in FLII) interacting protein 1
chr1	91039047	91039878	+	91035112	91039878	A5SS	0.33	50	50	ENSMUST00000068116.13	ENSMUSG00000026305.16	Lrrfip1	chr1	protein_coding	leucine rich repeat (in FLII) interacting protein 1
chr1	90996371	91012668	+	91006803	91012668	A5SS&ES	0.33	50	50	ENSMUST00000068167.13	ENSMUSG00000026305.16	Lrrfip1	chr1	protein_coding	leucine rich repeat (in FLII) interacting protein 1
chr1	91040019;91040436	91040375;91042318	+	91040019	91042318	cassetteExon	0.5	100	100	ENSMUST00000097649.10	ENSMUSG00000026305.16	Lrrfip1	chr1	protein_coding	leucine rich repeat (in FLII) interacting protein 1
chr1	91040019;91040536	91040375;91042318	+	91040019	91042318	cassetteExon	0.5	100	100	ENSMUST00000097649.10	ENSMUSG00000026305.16	Lrrfip1	chr1	protein_coding	leucine rich repeat (in FLII) interacting protein 1
chr1	90996371	91001046	+	90996371	91012668	A3SS	0.33	50	50	ENSMUST00000186762.7	ENSMUSG00000026305.16	Lrrfip1	chr1	protein_coding	leucine rich repeat (in FLII) interacting protein 1
chr1	91009901	91012668	+	90996371	91012668	A5SS	0.33	50	50	ENSMUST00000186762.7	ENSMUSG00000026305.16	Lrrfip1	chr1	protein_coding	leucine rich repeat (in FLII) interacting protein 1
chr1	91040536	91042318	+	91040436	91042318	A5SS	0.33	50	50	ENSMUST00000188094.7	ENSMUSG00000026305.16	Lrrfip1	chr1	protein_coding	leucine rich repeat (in FLII) interacting protein 1
chr1	91072891;91077895	91077805;91079887	+	91072891	91079887	cassetteExon	0.5	100	100	ENSMUST00000188818.2	ENSMUSG00000070732.3	Rbm44	chr1	protein_coding	RNA binding motif protein 44
chr1	91124631	91150828	+	91124631	91134119	3pMXE	0.33	50	50	ENSMUST00000165855.8	ENSMUSG00000034353.15	Ramp1	chr1	protein_coding	receptor (calcitonin) activity modifying protein 1
chr1	91124631;91133047	91132969;91134119	+	91124631	91134119	cassetteExon	0.5	100	100	ENSMUST00000165855.8	ENSMUSG00000034353.15	Ramp1	chr1	protein_coding	receptor (calcitonin) activity modifying protein 1
chr1	91124631	91132969	+	91124631	91150828	A3SS	0.33	50	50	ENSMUST00000097648.6	ENSMUSG00000034353.15	Ramp1	chr1	protein_coding	receptor (calcitonin) activity modifying protein 1
chr1	91178159;91181549	91181482;91181937	+	91178159	91181937	cassetteExon	0.5	100	100	ENSMUST00000188576.2	ENSMUSG00000034343.15	Ube2f	chr1	protein_coding	ubiquitin-conjugating enzyme E2F (putative)
chr1	91178159	91181982	+	91178159	91181937	A3SS	0.25	50	50	ENSMUST00000188576.2	ENSMUSG00000034343.15	Ube2f	chr1	protein_coding	ubiquitin-conjugating enzyme E2F (putative)
chr1	91178159	91181985	+	91178159	91181937	A3SS	0.25	50	50	ENSMUST00000188576.2	ENSMUSG00000034343.15	Ube2f	chr1	protein_coding	ubiquitin-conjugating enzyme E2F (putative)
chr1	91178159	91181982	+	91178159;91181549	91181482;91181982	ES	0.33	50	50	ENSMUST00000059743.12	ENSMUSG00000034343.15	Ube2f	chr1	protein_coding	ubiquitin-conjugating enzyme E2F (putative)
chr1	91178159	91181937	+	91178159	91181482	A3SS&ES	0.25	50	50	ENSMUST00000059743.12	ENSMUSG00000034343.15	Ube2f	chr1	protein_coding	ubiquitin-conjugating enzyme E2F (putative)
chr1	91178159	91181985	+	91178159	91181482	A3SS&ES	0.25	50	50	ENSMUST00000059743.12	ENSMUSG00000034343.15	Ube2f	chr1	protein_coding	ubiquitin-conjugating enzyme E2F (putative)
chr1	91181549	91181937	+	91181549	91181982	A3SS	0.5	50	50	ENSMUST00000059743.12	ENSMUSG00000034343.15	Ube2f	chr1	protein_coding	ubiquitin-conjugating enzyme E2F (putative)
chr1	91178575	91181482	+	91178159	91181482	A5SS	0.5	50	50	ENSMUST00000059743.12	ENSMUSG00000034343.15	Ube2f	chr1	protein_coding	ubiquitin-conjugating enzyme E2F (putative)
chr1	91178575	91181982	+	91181549	91181982	A5SS&ES	0.33	50	50	ENSMUST00000059743.12	ENSMUSG00000034343.15	Ube2f	chr1	protein_coding	ubiquitin-conjugating enzyme E2F (putative)
chr1	91178159	91181985	+	91178159	91181982	A3SS	0.25	50	50	ENSMUST00000178627.8	ENSMUSG00000034343.15	Ube2f	chr1	protein_coding	ubiquitin-conjugating enzyme E2F (putative)
chr1	91178575	91181982	+	91178159	91181982	A5SS	0.33	50	50	ENSMUST00000178627.8	ENSMUSG00000034343.15	Ube2f	chr1	protein_coding	ubiquitin-conjugating enzyme E2F (putative)
chr1	91178575	91181982	+	91178575	91181482	A3SS&ES	0.5	50	50	ENSMUST00000171112.8	ENSMUSG00000034343.15	Ube2f	chr1	protein_coding	ubiquitin-conjugating enzyme E2F (putative)
chr1	91178575;91181549	91181482;91181982	+	91178575	91181982	cassetteExon	0.5	100	100	ENSMUST00000191533.2	ENSMUSG00000034343.15	Ube2f	chr1	protein_coding	ubiquitin-conjugating enzyme E2F (putative)
chr1	91226170;91227191	91227126;91228250	+	91226170	91228250	cassetteExon	0.5	100	100	ENSMUST00000027532.13	ENSMUSG00000026307.13	Scly	chr1	protein_coding	selenocysteine lyase
chr1	91230591;91232190	91232159;91232996	+	91230591	91232996	cassetteExon	0.5	100	100	ENSMUST00000027532.13	ENSMUSG00000026307.13	Scly	chr1	protein_coding	selenocysteine lyase
chr1	91226170	91228233	+	91226170	91228250	A3SS	0.33	50	50	ENSMUST00000027532.13	ENSMUSG00000026307.13	Scly	chr1	protein_coding	selenocysteine lyase
chr1	91228362	91230495	+	91228362	91230491	A3SS	0.5	50	50	ENSMUST00000027532.13	ENSMUSG00000026307.13	Scly	chr1	protein_coding	selenocysteine lyase
chr1	91233176	91236015	+	91233176	91236036	A3SS	0.5	50	50	ENSMUST00000027532.13	ENSMUSG00000026307.13	Scly	chr1	protein_coding	selenocysteine lyase
chr1	91226222	91228250	+	91226170	91228250	A5SS	0.25	50	50	ENSMUST00000027532.13	ENSMUSG00000026307.13	Scly	chr1	protein_coding	selenocysteine lyase
chr1	91227743	91228250	+	91226170	91228250	A5SS	0.25	50	50	ENSMUST00000027532.13	ENSMUSG00000026307.13	Scly	chr1	protein_coding	selenocysteine lyase
chr1	91226170	91228233	+	91226170	91227126	A3SS&ES	0.33	50	50	ENSMUST00000142488.8	ENSMUSG00000026307.13	Scly	chr1	protein_coding	selenocysteine lyase
chr1	91226222	91228250	+	91227191	91228250	A5SS&ES	0.25	50	50	ENSMUST00000142488.8	ENSMUSG00000026307.13	Scly	chr1	protein_coding	selenocysteine lyase
chr1	91227743	91228250	+	91227191	91228250	A5SS	0.25	50	50	ENSMUST00000142488.8	ENSMUSG00000026307.13	Scly	chr1	protein_coding	selenocysteine lyase
chr1	91227743	91228250	+	91226222	91228250	A5SS	0.25	50	50	ENSMUST00000142802.2	ENSMUSG00000026307.13	Scly	chr1	protein_coding	selenocysteine lyase
chr1	91255380	91268231	+	91255380;91262543	91262412;91268231	ES	0.5	50	50	ENSMUST00000088904.10	ENSMUSG00000049515.13	Espnl	chr1	protein_coding	espin-like
chr1	91301738	91304040	-	91303260	91304040	A3SS	0.33	50	50	ENSMUST00000187049.7	ENSMUSG00000026309.15	Ilkap	chr1	protein_coding	integrin-linked kinase-associated serine/threonine phosphatase 2C
chr1	91303804	91304040	-	91303260	91304040	A3SS	0.33	50	50	ENSMUST00000187049.7	ENSMUSG00000026309.15	Ilkap	chr1	protein_coding	integrin-linked kinase-associated serine/threonine phosphatase 2C
chr1	91308955	91309573	-	91306307	91309573	A3SS	0.5	50	50	ENSMUST00000187049.7	ENSMUSG00000026309.15	Ilkap	chr1	protein_coding	integrin-linked kinase-associated serine/threonine phosphatase 2C
chr1	91309616	91318854	-	91318385	91318854	A3SS&ES	0.5	50	50	ENSMUST00000187049.7	ENSMUSG00000026309.15	Ilkap	chr1	protein_coding	integrin-linked kinase-associated serine/threonine phosphatase 2C
chr1	91316186	91318329	-	91316168	91318329	A3SS	0.33	50	50	ENSMUST00000187049.7	ENSMUSG00000026309.15	Ilkap	chr1	protein_coding	integrin-linked kinase-associated serine/threonine phosphatase 2C
chr1	91315063	91316067	-	91315063	91316077	A5SS	0.5	50	50	ENSMUST00000187049.7	ENSMUSG00000026309.15	Ilkap	chr1	protein_coding	integrin-linked kinase-associated serine/threonine phosphatase 2C
chr1	91303804	91304040	-	91301738	91304040	A3SS	0.33	50	50	ENSMUST00000190747.7	ENSMUSG00000026309.15	Ilkap	chr1	protein_coding	integrin-linked kinase-associated serine/threonine phosphatase 2C
chr1	91304121	91318329	-	91304121	91306188	5pMXE	0.5	50	50	ENSMUST00000185886.7	ENSMUSG00000026309.15	Ilkap	chr1	protein_coding	integrin-linked kinase-associated serine/threonine phosphatase 2C
chr1	91316168	91318329	-	91304121	91318329	A3SS	0.33	50	50	ENSMUST00000187306.7	ENSMUSG00000026309.15	Ilkap	chr1	protein_coding	integrin-linked kinase-associated serine/threonine phosphatase 2C
chr1	91316186	91318329	-	91304121	91318329	A3SS	0.33	50	50	ENSMUST00000187306.7	ENSMUSG00000026309.15	Ilkap	chr1	protein_coding	integrin-linked kinase-associated serine/threonine phosphatase 2C
chr1	91304121;91318385	91318329;91318854	-	91304121;91309616	91306188;91318854	MXE	0.5	100	100	ENSMUST00000187678.7	ENSMUSG00000026309.15	Ilkap	chr1	protein_coding	integrin-linked kinase-associated serine/threonine phosphatase 2C
chr1	91340701	91341693	-	91340701	91340779	5pMXE	0.5	50	50	ENSMUST00000086851.2	ENSMUSG00000067071.9	Hes6	chr1	protein_coding	hairy and enhancer of split 6
chr1	91375466	91376430	-	91373344	91376430	A3SS	0.5	50	50	ENSMUST00000069620.10	ENSMUSG00000055866.10	Per2	chr1	protein_coding	period circadian clock 2
chr1	91429146;91433216	91433145;91435215	+	91429146	91435215	cassetteExon	0.5	100	100	ENSMUST00000189341.7	ENSMUSG00000034292.14	Traf3ip1	chr1	protein_coding	TRAF3 interacting protein 1
chr1	91435290	91439074	+	91435290	91446016	A3SS	0.5	50	50	ENSMUST00000047242.9	ENSMUSG00000034292.14	Traf3ip1	chr1	protein_coding	TRAF3 interacting protein 1
chr1	91443898	91446016	+	91435290	91446016	A5SS	0.5	50	50	ENSMUST00000047242.9	ENSMUSG00000034292.14	Traf3ip1	chr1	protein_coding	TRAF3 interacting protein 1
chr1	91472019	91479776	+	91472019;91474952	91474650;91479776	ES	0.5	50	50	ENSMUST00000086843.11	ENSMUSG00000026311.17	Asb1	chr1	protein_coding	ankyrin repeat and SOCS box-containing 1
chr1	91468586	91471873	+	91468586	91471878	A3SS	0.5	50	50	ENSMUST00000086843.11	ENSMUSG00000026311.17	Asb1	chr1	protein_coding	ankyrin repeat and SOCS box-containing 1
chr1	91472019	91479776	+	91472019	91474650	3pMXE	0.33	50	50	ENSMUST00000185718.7	ENSMUSG00000026311.17	Asb1	chr1	protein_coding	ankyrin repeat and SOCS box-containing 1
chr1	91472019	91482473	+	91472019	91474650	3pMXE	0.33	50	50	ENSMUST00000185718.7	ENSMUSG00000026311.17	Asb1	chr1	protein_coding	ankyrin repeat and SOCS box-containing 1
chr1	91468897	91471873	+	91468586	91471873	A5SS	0.5	50	50	ENSMUST00000185718.7	ENSMUSG00000026311.17	Asb1	chr1	protein_coding	ankyrin repeat and SOCS box-containing 1
chr1	91472019	91482473	+	91472019;91480161	91479776;91482473	ES	0.5	50	50	ENSMUST00000190484.7	ENSMUSG00000026311.17	Asb1	chr1	protein_coding	ankyrin repeat and SOCS box-containing 1
chr1	92076216	92121692	-	92076216	92107980	5pMXE	0.25	50	50	ENSMUST00000097644.9	ENSMUSG00000026313.17	Hdac4	chr1	protein_coding	histone deacetylase 4
chr1	92076216	92123136	-	92076216	92107980	5pMXE	0.25	50	50	ENSMUST00000097644.9	ENSMUSG00000026313.17	Hdac4	chr1	protein_coding	histone deacetylase 4
chr1	91892548	91896060	-	91892548	91896075	A5SS	0.5	50	50	ENSMUST00000097644.9	ENSMUSG00000026313.17	Hdac4	chr1	protein_coding	histone deacetylase 4
chr1	91929997	91934439	-	91929997	91940391	A5SS	0.5	50	50	ENSMUST00000097644.9	ENSMUSG00000026313.17	Hdac4	chr1	protein_coding	histone deacetylase 4
chr1	91982694	92019454	-	91982694	92075978	A5SS	0.33	50	50	ENSMUST00000097644.9	ENSMUSG00000026313.17	Hdac4	chr1	protein_coding	histone deacetylase 4
chr1	91982694	92040950	-	91982694	92075978	A5SS	0.33	50	50	ENSMUST00000097644.9	ENSMUSG00000026313.17	Hdac4	chr1	protein_coding	histone deacetylase 4
chr1	92076216	92107724	-	92076216	92107980	A5SS	0.25	50	50	ENSMUST00000097644.9	ENSMUSG00000026313.17	Hdac4	chr1	protein_coding	histone deacetylase 4
chr1	92076216	92121692	-	92076216	92107724	5pMXE	0.25	50	50	ENSMUST00000186002.3	ENSMUSG00000026313.17	Hdac4	chr1	protein_coding	histone deacetylase 4
chr1	92076216	92123136	-	92076216	92107724	5pMXE	0.25	50	50	ENSMUST00000186002.3	ENSMUSG00000026313.17	Hdac4	chr1	protein_coding	histone deacetylase 4
chr1	91982694;92019540	92019454;92040950	-	91982694	92040950	cassetteExon	0.5	100	100	ENSMUST00000185341.7	ENSMUSG00000026313.17	Hdac4	chr1	protein_coding	histone deacetylase 4
chr1	92076216	92123136	-	92076216;92121843	92121692;92123136	ES	0.5	50	50	ENSMUST00000212867.2	ENSMUSG00000026313.17	Hdac4	chr1	protein_coding	histone deacetylase 4
chr1	92397800	92401385	-	92397800;92398707	92398539;92401385	ES	0.5	50	50	ENSMUST00000027478.7	ENSMUSG00000026260.13	Ndufa10	chr1	protein_coding	NADH:ubiquinone oxidoreductase subunit A10
chr1	92390067	92390672	-	92390067	92390800	A5SS	0.5	50	50	ENSMUST00000027478.7	ENSMUSG00000026260.13	Ndufa10	chr1	protein_coding	NADH:ubiquinone oxidoreductase subunit A10
chr1	92397800	92398673	-	92397800	92398539	A5SS	0.33	50	50	ENSMUST00000027478.7	ENSMUSG00000026260.13	Ndufa10	chr1	protein_coding	NADH:ubiquinone oxidoreductase subunit A10
chr1	92397800	92401385	-	92397800;92398707	92398673;92401385	ES	0.5	50	50	ENSMUST00000189503.7	ENSMUSG00000026260.13	Ndufa10	chr1	protein_coding	NADH:ubiquinone oxidoreductase subunit A10
chr1	92397800	92401385	-	92397800	92398539	5pMXE	0.33	50	50	ENSMUST00000187141.7	ENSMUSG00000026260.13	Ndufa10	chr1	protein_coding	NADH:ubiquinone oxidoreductase subunit A10
chr1	92439824	92446038	-	92439758	92446038	A3SS	0.5	50	50	ENSMUST00000062353.12	ENSMUSG00000042849.12	Olfr1414	chr1	protein_coding	olfactory receptor 1414
chr1	92522576	92524019	+	92522576	92524099	A3SS	0.5	50	50	ENSMUST00000190844.3	ENSMUSG00000062497.4	Olfr1411	chr1	protein_coding	olfactory receptor 1411
chr1	92567481	92569329	-	92567481	92567966	5pMXE	0.33	50	50	ENSMUST00000112999.8	ENSMUSG00000073616.11	Cops9	chr1	protein_coding	COP9 signalosome subunit 9
chr1	92567481	92569602	-	92567481	92567966	5pMXE	0.33	50	50	ENSMUST00000112999.8	ENSMUSG00000073616.11	Cops9	chr1	protein_coding	COP9 signalosome subunit 9
chr1	92567481	92569602	-	92567481	92569329	A5SS	0.33	50	50	ENSMUST00000148508.2	ENSMUSG00000073616.11	Cops9	chr1	protein_coding	COP9 signalosome subunit 9
chr1	92759819	92763095	+	92759819	92781069	A3SS	0.5	50	50	ENSMUST00000045970.8	ENSMUSG00000034220.8	Gpc1	chr1	protein_coding	glypican 1
chr1	92798040	92798531	-	92789124	92798531	A3SS	0.5	50	50	ENSMUST00000212504.2	ENSMUSG00000034212.15	Ankmy1	chr1	protein_coding	ankyrin repeat and MYND domain containing 1
chr1	92799467	92804257	-	92799470	92804257	A3SS	0.5	50	50	ENSMUST00000160548.8	ENSMUSG00000034212.15	Ankmy1	chr1	protein_coding	ankyrin repeat and MYND domain containing 1
chr1	92842921	92843546	+	92842921	92843536	A3SS	0.33	50	50	ENSMUST00000027487.15	ENSMUSG00000026269.15	Rnpepl1	chr1	protein_coding	arginyl aminopeptidase (aminopeptidase B)-like 1
chr1	92842921	92843554	+	92842921	92843536	A3SS	0.33	50	50	ENSMUST00000027487.15	ENSMUSG00000026269.15	Rnpepl1	chr1	protein_coding	arginyl aminopeptidase (aminopeptidase B)-like 1
chr1	92845848	92846628	+	92845848	92846595	A3SS	0.33	50	50	ENSMUST00000027487.15	ENSMUSG00000026269.15	Rnpepl1	chr1	protein_coding	arginyl aminopeptidase (aminopeptidase B)-like 1
chr1	92845848	92846660	+	92845848	92846595	A3SS	0.33	50	50	ENSMUST00000027487.15	ENSMUSG00000026269.15	Rnpepl1	chr1	protein_coding	arginyl aminopeptidase (aminopeptidase B)-like 1
chr1	92844966	92845740	+	92845468	92845740	A5SS&ES	0.5	50	50	ENSMUST00000027487.15	ENSMUSG00000026269.15	Rnpepl1	chr1	protein_coding	arginyl aminopeptidase (aminopeptidase B)-like 1
chr1	92842921	92843554	+	92842921	92843546	A3SS	0.33	50	50	ENSMUST00000178116.8	ENSMUSG00000026269.15	Rnpepl1	chr1	protein_coding	arginyl aminopeptidase (aminopeptidase B)-like 1
chr1	92845848	92846628	+	92845848	92846660	A3SS	0.33	50	50	ENSMUST00000178816.8	ENSMUSG00000026269.15	Rnpepl1	chr1	protein_coding	arginyl aminopeptidase (aminopeptidase B)-like 1
chr1	92872619	92874496	+	92872619;92873000	92872739;92874496	ES	0.5	50	50	ENSMUST00000027488.11	ENSMUSG00000026270.12	Capn10	chr1	protein_coding	calpain 10
chr1	92871188	92871553	+	92871188	92871401	A3SS	0.5	50	50	ENSMUST00000027488.11	ENSMUSG00000026270.12	Capn10	chr1	protein_coding	calpain 10
chr1	92872619	92874496	+	92872619	92872739	3pMXE	0.5	50	50	ENSMUST00000187342.2	ENSMUSG00000026270.12	Capn10	chr1	protein_coding	calpain 10
chr1	92884859	92910280	+	92878703	92910280	A5SS	0.2	50	50	ENSMUST00000185421.2	ENSMUSG00000026271.16	Gpr35	chr1	protein_coding	G protein-coupled receptor 35
chr1	92901003	92910280	+	92878703	92910280	A5SS	0.2	50	50	ENSMUST00000185421.2	ENSMUSG00000026271.16	Gpr35	chr1	protein_coding	G protein-coupled receptor 35
chr1	92903170	92910280	+	92878703	92910280	A5SS	0.2	50	50	ENSMUST00000185421.2	ENSMUSG00000026271.16	Gpr35	chr1	protein_coding	G protein-coupled receptor 35
chr1	92907023	92910280	+	92878703	92910280	A5SS	0.2	50	50	ENSMUST00000185421.2	ENSMUSG00000026271.16	Gpr35	chr1	protein_coding	G protein-coupled receptor 35
chr1	92901003	92910280	+	92884859	92910280	A5SS	0.25	50	50	ENSMUST00000189697.2	ENSMUSG00000026271.16	Gpr35	chr1	protein_coding	G protein-coupled receptor 35
chr1	92903170	92910280	+	92884859	92910280	A5SS	0.25	50	50	ENSMUST00000189697.2	ENSMUSG00000026271.16	Gpr35	chr1	protein_coding	G protein-coupled receptor 35
chr1	92907023	92910280	+	92884859	92910280	A5SS	0.25	50	50	ENSMUST00000189697.2	ENSMUSG00000026271.16	Gpr35	chr1	protein_coding	G protein-coupled receptor 35
chr1	92901003	92910866	+	92901003	92910280	A3SS	0.5	50	50	ENSMUST00000186298.7	ENSMUSG00000026271.16	Gpr35	chr1	protein_coding	G protein-coupled receptor 35
chr1	92903170	92910280	+	92901003	92910280	A5SS	0.2	50	50	ENSMUST00000186298.7	ENSMUSG00000026271.16	Gpr35	chr1	protein_coding	G protein-coupled receptor 35
chr1	92907023	92910280	+	92901003	92910280	A5SS	0.2	50	50	ENSMUST00000186298.7	ENSMUSG00000026271.16	Gpr35	chr1	protein_coding	G protein-coupled receptor 35
chr1	92907023	92910280	+	92903170	92910280	A5SS	0.2	50	50	ENSMUST00000064480.7	ENSMUSG00000026271.16	Gpr35	chr1	protein_coding	G protein-coupled receptor 35
chr1	92953457	92964568	-	92953457;92954577	92954554;92964568	ES	0.33	50	50	ENSMUST00000171796.8	ENSMUSG00000014602.16	Kif1a	chr1	protein_coding	kinesin family member 1A
chr1	92953457;92962294	92962268;92964568	-	92953457;92954577	92954554;92964568	MXE	0.5	100	100	ENSMUST00000171796.8	ENSMUSG00000014602.16	Kif1a	chr1	protein_coding	kinesin family member 1A
chr1	92974492;92979403	92979125;92980146	-	92974492	92980146	cassetteExon	0.5	100	100	ENSMUST00000171796.8	ENSMUSG00000014602.16	Kif1a	chr1	protein_coding	kinesin family member 1A
chr1	92992004;92993300	92993274;92993769	-	92992004	92993769	cassetteExon	0.5	100	100	ENSMUST00000171796.8	ENSMUSG00000014602.16	Kif1a	chr1	protein_coding	kinesin family member 1A
chr1	93010202;93028821	93028752;93029485	-	93010202	93029485	cassetteExon	0.5	100	100	ENSMUST00000171796.8	ENSMUSG00000014602.16	Kif1a	chr1	protein_coding	kinesin family member 1A
chr1	92951284	92952301	-	92951242	92952301	A3SS	0.5	50	50	ENSMUST00000171796.8	ENSMUSG00000014602.16	Kif1a	chr1	protein_coding	kinesin family member 1A
chr1	92974580	92980146	-	92974492	92980146	A3SS	0.33	50	50	ENSMUST00000171796.8	ENSMUSG00000014602.16	Kif1a	chr1	protein_coding	kinesin family member 1A
chr1	92996282	92996369	-	92996282	93000030	A5SS	0.5	50	50	ENSMUST00000171796.8	ENSMUSG00000014602.16	Kif1a	chr1	protein_coding	kinesin family member 1A
chr1	92953457	92964568	-	92953457;92962294	92962268;92964568	ES	0.33	50	50	ENSMUST00000112958.9	ENSMUSG00000014602.16	Kif1a	chr1	protein_coding	kinesin family member 1A
chr1	92974580	92980146	-	92979403	92980146	A3SS&ES	0.33	50	50	ENSMUST00000190723.7	ENSMUSG00000014602.16	Kif1a	chr1	protein_coding	kinesin family member 1A
chr1	92953457	92962268	-	92953457	92954554	5pMXE	0.33	50	50	ENSMUST00000190854.2	ENSMUSG00000014602.16	Kif1a	chr1	protein_coding	kinesin family member 1A
chr1	92953457	92964568	-	92953457	92954554	5pMXE	0.33	50	50	ENSMUST00000190854.2	ENSMUSG00000014602.16	Kif1a	chr1	protein_coding	kinesin family member 1A
chr1	93069131	93069769	+	93069131	93069790	A3SS	0.5	50	50	ENSMUST00000027491.7	ENSMUSG00000026272.7	Agxt	chr1	protein_coding	alanine-glyoxylate aminotransferase
chr1	93067680	93068044	+	93067073	93068044	A5SS	0.5	50	50	ENSMUST00000027491.7	ENSMUSG00000026272.7	Agxt	chr1	protein_coding	alanine-glyoxylate aminotransferase
chr1	93088072	93088524	-	93088072	93088611	A5SS	0.5	50	50	ENSMUST00000043718.12	ENSMUSG00000034159.13	Mab21l4	chr1	protein_coding	mab-21-like 4
chr1	93213816	93217030	+	93213816;93214745	93214650;93217030	ES	0.5	50	50	ENSMUST00000062202.14	ENSMUSG00000047793.14	Sned1	chr1	protein_coding	sushi, nidogen and EGF-like domains 1
chr1	93209072	93209330	+	93209072	93209374	A3SS	0.5	50	50	ENSMUST00000062202.14	ENSMUSG00000047793.14	Sned1	chr1	protein_coding	sushi, nidogen and EGF-like domains 1
chr1	93213816	93217030	+	93214745	93217030	5pMXE	0.5	50	50	ENSMUST00000168122.2	ENSMUSG00000047793.14	Sned1	chr1	protein_coding	sushi, nidogen and EGF-like domains 1
chr1	93229517	93230440	-	93229306	93230440	A3SS	0.5	50	50	ENSMUST00000112944.8	ENSMUSG00000026273.14	Mterf4	chr1	protein_coding	mitochondrial transcription termination factor 4
chr1	93265302	93270980	-	93265302	93270248	5pMXE	0.33	50	50	ENSMUST00000027493.4	ENSMUSG00000026274.12	Pask	chr1	protein_coding	PAS domain containing serine/threonine kinase
chr1	93265302	93270988	-	93265302	93270248	5pMXE	0.33	50	50	ENSMUST00000027493.4	ENSMUSG00000026274.12	Pask	chr1	protein_coding	PAS domain containing serine/threonine kinase
chr1	93265302	93270988	-	93265302	93270980	A5SS	0.33	50	50	ENSMUST00000139028.2	ENSMUSG00000026274.12	Pask	chr1	protein_coding	PAS domain containing serine/threonine kinase
chr1	93271433	93278047	+	93271433;93274009	93273878;93278047	ES	0.5	50	50	ENSMUST00000027494.11	ENSMUSG00000026275.14	Ppp1r7	chr1	protein_coding	protein phosphatase 1, regulatory subunit 7
chr1	93278736	93279048	+	93278736	93279228	A3SS	0.5	50	50	ENSMUST00000027494.11	ENSMUSG00000026275.14	Ppp1r7	chr1	protein_coding	protein phosphatase 1, regulatory subunit 7
chr1	93329949	93330672	+	93329949	93330363	A3SS&ES	0.5	50	50	ENSMUST00000058682.11	ENSMUSG00000034107.11	Ano7	chr1	protein_coding	anoctamin 7
chr1	93330482	93330672	+	93330482	93330792	A3SS	0.5	50	50	ENSMUST00000058682.11	ENSMUSG00000034107.11	Ano7	chr1	protein_coding	anoctamin 7
chr1	93329949	93330672	+	93329949;93330482	93330363;93330672	ES	0.5	50	50	ENSMUST00000186641.7	ENSMUSG00000034107.11	Ano7	chr1	protein_coding	anoctamin 7
chr1	93357207	93358677	-	93357207;93358026	93357820;93358677	ES	0.5	50	50	ENSMUST00000170883.8	ENSMUSG00000034088.16	Hdlbp	chr1	protein_coding	high density lipoprotein (HDL) binding protein
chr1	93369972;93389321	93389066;93406435	-	93369972	93406435	cassetteExon	0.5	100	100	ENSMUST00000170883.8	ENSMUSG00000034088.16	Hdlbp	chr1	protein_coding	high density lipoprotein (HDL) binding protein
chr1	93369972	93373011	-	93369972	93406435	A5SS	0.2	50	50	ENSMUST00000170883.8	ENSMUSG00000034088.16	Hdlbp	chr1	protein_coding	high density lipoprotein (HDL) binding protein
chr1	93369972	93373302	-	93369972	93406435	A5SS	0.2	50	50	ENSMUST00000170883.8	ENSMUSG00000034088.16	Hdlbp	chr1	protein_coding	high density lipoprotein (HDL) binding protein
chr1	93369972	93405929	-	93369972	93406435	A5SS	0.2	50	50	ENSMUST00000170883.8	ENSMUSG00000034088.16	Hdlbp	chr1	protein_coding	high density lipoprotein (HDL) binding protein
chr1	93369972	93389066	-	93369972	93373302	5pMXE	0.2	50	50	ENSMUST00000042498.14	ENSMUSG00000034088.16	Hdlbp	chr1	protein_coding	high density lipoprotein (HDL) binding protein
chr1	93369972	93405929	-	93369972	93373302	5pMXE	0.2	50	50	ENSMUST00000042498.14	ENSMUSG00000034088.16	Hdlbp	chr1	protein_coding	high density lipoprotein (HDL) binding protein
chr1	93369972	93373011	-	93369972	93373302	A5SS	0.2	50	50	ENSMUST00000042498.14	ENSMUSG00000034088.16	Hdlbp	chr1	protein_coding	high density lipoprotein (HDL) binding protein
chr1	93368514	93369908	-	93359240	93369908	A3SS	0.5	50	50	ENSMUST00000190321.7	ENSMUSG00000034088.16	Hdlbp	chr1	protein_coding	high density lipoprotein (HDL) binding protein
chr1	93359240	93364816	-	93359240	93369908	A5SS	0.5	50	50	ENSMUST00000190321.7	ENSMUSG00000034088.16	Hdlbp	chr1	protein_coding	high density lipoprotein (HDL) binding protein
chr1	93369972	93389066	-	93369972	93373011	5pMXE	0.2	50	50	ENSMUST00000186787.7	ENSMUSG00000034088.16	Hdlbp	chr1	protein_coding	high density lipoprotein (HDL) binding protein
chr1	93369972	93405929	-	93369972	93373011	5pMXE	0.2	50	50	ENSMUST00000186787.7	ENSMUSG00000034088.16	Hdlbp	chr1	protein_coding	high density lipoprotein (HDL) binding protein
chr1	93369972	93405929	-	93369972	93389066	A5SS&ES	0.2	50	50	ENSMUST00000189025.7	ENSMUSG00000034088.16	Hdlbp	chr1	protein_coding	high density lipoprotein (HDL) binding protein
chr1	93406790	93418879	+	93406790;93416876	93416846;93418879	ES	0.5	50	50	ENSMUST00000027495.15	ENSMUSG00000026276.21	Septin2	chr1	protein_coding	septin 2
chr1	93406790;93407288	93407186;93416846	+	93406790	93416846	cassetteExon	0.5	100	100	ENSMUST00000027495.15	ENSMUSG00000026276.21	Septin2	chr1	protein_coding	septin 2
chr1	93406790;93407321	93407186;93416846	+	93406790	93416846	cassetteExon	0.5	100	100	ENSMUST00000027495.15	ENSMUSG00000026276.21	Septin2	chr1	protein_coding	septin 2
chr1	93406790	93416850	+	93406790	93416846	A3SS	0.25	50	50	ENSMUST00000027495.15	ENSMUSG00000026276.21	Septin2	chr1	protein_coding	septin 2
chr1	93406902	93416846	+	93406790	93416846	A5SS	0.2	50	50	ENSMUST00000027495.15	ENSMUSG00000026276.21	Septin2	chr1	protein_coding	septin 2
chr1	93407036	93416846	+	93406790	93416846	A5SS	0.2	50	50	ENSMUST00000027495.15	ENSMUSG00000026276.21	Septin2	chr1	protein_coding	septin 2
chr1	93406790;93416876	93416850;93418879	+	93406790	93418879	cassetteExon	0.5	100	100	ENSMUST00000136182.8	ENSMUSG00000026276.21	Septin2	chr1	protein_coding	septin 2
chr1	93406790	93407186	+	93406790	93418879	A3SS	0.25	50	50	ENSMUST00000136182.8	ENSMUSG00000026276.21	Septin2	chr1	protein_coding	septin 2
chr1	93406790	93407186	+	93406790	93416850	A3SS	0.25	50	50	ENSMUST00000131175.9	ENSMUSG00000026276.21	Septin2	chr1	protein_coding	septin 2
chr1	93406902	93416850	+	93406790	93416850	A5SS	0.33	50	50	ENSMUST00000131175.9	ENSMUSG00000026276.21	Septin2	chr1	protein_coding	septin 2
chr1	93407036	93416850	+	93406790	93416850	A5SS	0.33	50	50	ENSMUST00000131175.9	ENSMUSG00000026276.21	Septin2	chr1	protein_coding	septin 2
chr1	93406902	93416846	+	93407321	93416846	A5SS&ES	0.2	50	50	ENSMUST00000153826.8	ENSMUSG00000026276.21	Septin2	chr1	protein_coding	septin 2
chr1	93407036	93416846	+	93407321	93416846	A5SS&ES	0.2	50	50	ENSMUST00000153826.8	ENSMUSG00000026276.21	Septin2	chr1	protein_coding	septin 2
chr1	93407288	93416846	+	93407321	93416846	A5SS	0.2	50	50	ENSMUST00000153826.8	ENSMUSG00000026276.21	Septin2	chr1	protein_coding	septin 2
chr1	93406902	93416850	+	93406902	93416846	A3SS	0.5	50	50	ENSMUST00000129211.8	ENSMUSG00000026276.21	Septin2	chr1	protein_coding	septin 2
chr1	93406790	93418879	+	93416876	93418879	A5SS&ES	0.5	50	50	ENSMUST00000129211.8	ENSMUSG00000026276.21	Septin2	chr1	protein_coding	septin 2
chr1	93407036	93416846	+	93406902	93416846	A5SS	0.2	50	50	ENSMUST00000129211.8	ENSMUSG00000026276.21	Septin2	chr1	protein_coding	septin 2
chr1	93407288	93416846	+	93406902	93416846	A5SS	0.2	50	50	ENSMUST00000129211.8	ENSMUSG00000026276.21	Septin2	chr1	protein_coding	septin 2
chr1	93407036	93416850	+	93406902	93416850	A5SS	0.33	50	50	ENSMUST00000112912.8	ENSMUSG00000026276.21	Septin2	chr1	protein_coding	septin 2
chr1	93407036	93416850	+	93407036	93416846	A3SS	0.5	50	50	ENSMUST00000149532.8	ENSMUSG00000026276.21	Septin2	chr1	protein_coding	septin 2
chr1	93407288	93416846	+	93407036	93416846	A5SS	0.2	50	50	ENSMUST00000149532.8	ENSMUSG00000026276.21	Septin2	chr1	protein_coding	septin 2
chr1	93406790	93416846	+	93407288	93416846	5pMXE	0.2	50	50	ENSMUST00000150931.2	ENSMUSG00000026276.21	Septin2	chr1	protein_coding	septin 2
chr1	93552346	93553183	-	93552346;93552870	93552756;93553183	ES	0.5	50	50	ENSMUST00000027498.14	ENSMUSG00000026277.15	Stk25	chr1	protein_coding	serine/threonine kinase 25 (yeast)
chr1	93563105	93585779	-	93563105	93563269	5pMXE	0.5	50	50	ENSMUST00000027498.14	ENSMUSG00000026277.15	Stk25	chr1	protein_coding	serine/threonine kinase 25 (yeast)
chr1	93552346	93553183	-	93552346	93552756	5pMXE	0.5	50	50	ENSMUST00000154008.8	ENSMUSG00000026277.15	Stk25	chr1	protein_coding	serine/threonine kinase 25 (yeast)
chr1	93621945;93622662	93622598;93622759	+	93621945	93622759	cassetteExon	0.5	100	100	ENSMUST00000027499.13	ENSMUSG00000026278.15	Bok	chr1	protein_coding	BCL2-related ovarian killer
chr1	93613576	93614129	+	93613576	93614140	A3SS	0.5	50	50	ENSMUST00000027499.13	ENSMUSG00000026278.15	Bok	chr1	protein_coding	BCL2-related ovarian killer
chr1	93621690	93621782	+	93617007	93621782	A5SS	0.5	50	50	ENSMUST00000027499.13	ENSMUSG00000026278.15	Bok	chr1	protein_coding	BCL2-related ovarian killer
chr1	93633377;93635136	93634956;93642620	-	93633377	93642620	cassetteExon	0.5	100	100	ENSMUST00000190116.7	ENSMUSG00000026279.15	Thap4	chr1	protein_coding	THAP domain containing 4
chr1	93653038	93659579	-	93653038	93677569	A5SS	0.33	50	50	ENSMUST00000190116.7	ENSMUSG00000026279.15	Thap4	chr1	protein_coding	THAP domain containing 4
chr1	93653038	93677660	-	93653038	93677569	A5SS	0.33	50	50	ENSMUST00000190116.7	ENSMUSG00000026279.15	Thap4	chr1	protein_coding	THAP domain containing 4
chr1	93653038	93677660	-	93653038	93659579	5pMXE	0.33	50	50	ENSMUST00000189728.7	ENSMUSG00000026279.15	Thap4	chr1	protein_coding	THAP domain containing 4
chr1	93696046	93702855	+	93696046;93701590	93701492;93702855	ES	0.5	50	50	ENSMUST00000149436.8	ENSMUSG00000026280.18	Atg4b	chr1	protein_coding	autophagy related 4B, cysteine peptidase
chr1	93702956	93706007	+	93702956	93703350	3pMXE	0.5	50	50	ENSMUST00000149436.8	ENSMUSG00000026280.18	Atg4b	chr1	protein_coding	autophagy related 4B, cysteine peptidase
chr1	93682776	93695775	+	93679303	93695775	A5SS	0.33	50	50	ENSMUST00000149436.8	ENSMUSG00000026280.18	Atg4b	chr1	protein_coding	autophagy related 4B, cysteine peptidase
chr1	93683178	93695775	+	93679303	93695775	A5SS	0.33	50	50	ENSMUST00000149436.8	ENSMUSG00000026280.18	Atg4b	chr1	protein_coding	autophagy related 4B, cysteine peptidase
chr1	93702956	93706007	+	93702956;93703422	93703350;93706007	ES	0.5	50	50	ENSMUST00000027502.16	ENSMUSG00000026280.18	Atg4b	chr1	protein_coding	autophagy related 4B, cysteine peptidase
chr1	93683178	93695775	+	93682776	93695775	A5SS	0.33	50	50	ENSMUST00000027502.16	ENSMUSG00000026280.18	Atg4b	chr1	protein_coding	autophagy related 4B, cysteine peptidase
chr1	93713746	93714233	+	93713688	93714233	A5SS	0.5	50	50	ENSMUST00000027502.16	ENSMUSG00000026280.18	Atg4b	chr1	protein_coding	autophagy related 4B, cysteine peptidase
chr1	93726192	93726498	-	93726192	93728524	A5SS	0.5	50	50	ENSMUST00000027503.14	ENSMUSG00000026281.16	Dtymk	chr1	protein_coding	deoxythymidylate kinase
chr1	93733841	93739487	+	93733841	93739504	A3SS	0.5	50	50	ENSMUST00000027505.13	ENSMUSG00000026283.14	Ing5	chr1	protein_coding	inhibitor of growth family, member 5
chr1	93732239	93733770	+	93731761	93733770	A5SS	0.5	50	50	ENSMUST00000027505.13	ENSMUSG00000026283.14	Ing5	chr1	protein_coding	inhibitor of growth family, member 5
chr1	93753041	93754007	+	93752773	93754007	A5SS	0.33	50	50	ENSMUST00000187321.2	ENSMUSG00000073609.10	D2hgdh	chr1	protein_coding	D-2-hydroxyglutarate dehydrogenase
chr1	93753302	93754007	+	93752773	93754007	A5SS	0.33	50	50	ENSMUST00000187321.2	ENSMUSG00000073609.10	D2hgdh	chr1	protein_coding	D-2-hydroxyglutarate dehydrogenase
chr1	93757618	93763009	+	93757618;93760511	93760318;93763009	ES	0.5	50	50	ENSMUST00000097633.10	ENSMUSG00000073609.10	D2hgdh	chr1	protein_coding	D-2-hydroxyglutarate dehydrogenase
chr1	93753302	93754007	+	93753041	93754007	A5SS	0.33	50	50	ENSMUST00000097633.10	ENSMUSG00000073609.10	D2hgdh	chr1	protein_coding	D-2-hydroxyglutarate dehydrogenase
chr1	93754593	93756928	+	93754362	93756928	A5SS	0.5	50	50	ENSMUST00000097633.10	ENSMUSG00000073609.10	D2hgdh	chr1	protein_coding	D-2-hydroxyglutarate dehydrogenase
chr1	93757618	93766543	+	93757618	93765662	3pMXE	0.25	50	50	ENSMUST00000189154.2	ENSMUSG00000073609.10	D2hgdh	chr1	protein_coding	D-2-hydroxyglutarate dehydrogenase
chr1	93757618;93763177	93763009;93765662	+	93757618	93765662	cassetteExon	0.5	100	100	ENSMUST00000189154.2	ENSMUSG00000073609.10	D2hgdh	chr1	protein_coding	D-2-hydroxyglutarate dehydrogenase
chr1	93757618	93760318	+	93757618	93765662	A3SS	0.25	50	50	ENSMUST00000189154.2	ENSMUSG00000073609.10	D2hgdh	chr1	protein_coding	D-2-hydroxyglutarate dehydrogenase
chr1	93757618;93765805	93765662;93766543	+	93757618	93766543	cassetteExon	0.5	100	100	ENSMUST00000188532.2	ENSMUSG00000073609.10	D2hgdh	chr1	protein_coding	D-2-hydroxyglutarate dehydrogenase
chr1	93757618	93760318	+	93757618	93766543	A3SS	0.25	50	50	ENSMUST00000188532.2	ENSMUSG00000073609.10	D2hgdh	chr1	protein_coding	D-2-hydroxyglutarate dehydrogenase
chr1	93757618	93763009	+	93757618	93766543	A3SS	0.25	50	50	ENSMUST00000188532.2	ENSMUSG00000073609.10	D2hgdh	chr1	protein_coding	D-2-hydroxyglutarate dehydrogenase
chr1	93789679	93801312	+	93789679;93800263	93800177;93801312	ES	0.5	50	50	ENSMUST00000190710.2	ENSMUSG00000094651.3	Gal3st2	chr1	protein_coding	galactose-3-O-sulfotransferase 2
chr1	93789341	93800177	+	93789679	93800177	A5SS&ES	0.5	50	50	ENSMUST00000190710.2	ENSMUSG00000094651.3	Gal3st2	chr1	protein_coding	galactose-3-O-sulfotransferase 2
chr1	93789679	93801312	+	93800263	93801312	A5SS&ES	0.5	50	50	ENSMUST00000094663.4	ENSMUSG00000094651.3	Gal3st2	chr1	protein_coding	galactose-3-O-sulfotransferase 2
chr1	93855784	93866327	+	93846178	93866327	A5SS	0.5	50	50	ENSMUST00000178757.8	ENSMUSG00000093805.8	Gal3st2b	chr1	protein_coding	galactose-3-O-sulfotransferase 2B
chr1	93948338	93950080	+	93948338;93949354	93949271;93950080	ES	0.5	50	50	ENSMUST00000190212.7	ENSMUSG00000034000.16	Neu4	chr1	protein_coding	sialidase 4
chr1	96800393	96805559	+	96800393	96835413	A3SS	0.5	50	50	ENSMUST00000188631.5	ENSMUSG00000097814.6	Panct2	chr1	lncRNA	pluripotency-associated noncoding transcript 2
chr1	97047667	97053317	-	97047718	97053317	A3SS	0.5	50	50	ENSMUST00000027569.14	ENSMUSG00000026331.14	Slco6c1	chr1	protein_coding	solute carrier organic anion transporter family, member 6c1
chr1	97574086	97589556	-	97574086;97582414	97582325;97589556	ES	0.5	50	50	ENSMUST00000053033.14	ENSMUSG00000044768.17	Macir	chr1	protein_coding	macrophage immunometabolism regulator
chr1	97582414	97588456	-	97582414	97589556	A5SS	0.33	50	50	ENSMUST00000053033.14	ENSMUSG00000044768.17	Macir	chr1	protein_coding	macrophage immunometabolism regulator
chr1	97582414	97589280	-	97582414	97589556	A5SS	0.33	50	50	ENSMUST00000053033.14	ENSMUSG00000044768.17	Macir	chr1	protein_coding	macrophage immunometabolism regulator
chr1	97582414	97589280	-	97582414	97588456	A5SS	0.33	50	50	ENSMUST00000153115.8	ENSMUSG00000044768.17	Macir	chr1	protein_coding	macrophage immunometabolism regulator
chr1	97647631;97649004	97648831;97651395	-	97647631	97651395	cassetteExon	0.5	100	100	ENSMUST00000042509.13	ENSMUSG00000040648.16	Ppip5k2	chr1	protein_coding	diphosphoinositol pentakisphosphate kinase 2
chr1	97645286	97647559	-	97640869	97647559	A3SS	0.5	50	50	ENSMUST00000042509.13	ENSMUSG00000040648.16	Ppip5k2	chr1	protein_coding	diphosphoinositol pentakisphosphate kinase 2
chr1	97640869	97644267	-	97640869	97647559	A5SS	0.5	50	50	ENSMUST00000042509.13	ENSMUSG00000040648.16	Ppip5k2	chr1	protein_coding	diphosphoinositol pentakisphosphate kinase 2
chr1	97703317	97710652	+	97703317;97705244	97705051;97710652	ES	0.5	50	50	ENSMUST00000112844.10	ENSMUSG00000026333.15	Gin1	chr1	protein_coding	gypsy retrotransposon integrase 1
chr1	97697980	97698269	+	97697980	97703172	A3SS	0.5	50	50	ENSMUST00000112844.10	ENSMUSG00000026333.15	Gin1	chr1	protein_coding	gypsy retrotransposon integrase 1
chr1	97705244	97710863	+	97705244	97710652	A3SS	0.33	50	50	ENSMUST00000112844.10	ENSMUSG00000026333.15	Gin1	chr1	protein_coding	gypsy retrotransposon integrase 1
chr1	97705244	97710919	+	97705244	97710652	A3SS	0.33	50	50	ENSMUST00000112844.10	ENSMUSG00000026333.15	Gin1	chr1	protein_coding	gypsy retrotransposon integrase 1
chr1	97703317	97710652	+	97703317	97705051	3pMXE	0.5	50	50	ENSMUST00000112842.8	ENSMUSG00000026333.15	Gin1	chr1	protein_coding	gypsy retrotransposon integrase 1
chr1	97705244	97710863	+	97705244	97710919	A3SS	0.33	50	50	ENSMUST00000027571.13	ENSMUSG00000026333.15	Gin1	chr1	protein_coding	gypsy retrotransposon integrase 1
chr1	97762241	97765688	-	97723117	97765688	A3SS	0.5	50	50	ENSMUST00000159041.8	ENSMUSG00000026335.17	Pam	chr1	protein_coding	peptidylglycine alpha-amidating monooxygenase
chr1	97780957	97811851	-	97780957;97792245	97791928;97811851	ES	0.33	50	50	ENSMUST00000058762.15	ENSMUSG00000026335.17	Pam	chr1	protein_coding	peptidylglycine alpha-amidating monooxygenase
chr1	97753762	97759180	-	97753765	97759180	A3SS	0.33	50	50	ENSMUST00000058762.15	ENSMUSG00000026335.17	Pam	chr1	protein_coding	peptidylglycine alpha-amidating monooxygenase
chr1	97782625	97811851	-	97792245	97811851	A3SS&ES	0.33	50	50	ENSMUST00000058762.15	ENSMUSG00000026335.17	Pam	chr1	protein_coding	peptidylglycine alpha-amidating monooxygenase
chr1	97885221	97903510	-	97872402	97903510	A3SS	0.5	50	50	ENSMUST00000058762.15	ENSMUSG00000026335.17	Pam	chr1	protein_coding	peptidylglycine alpha-amidating monooxygenase
chr1	98001901	98023210	-	97904984	98023210	A3SS	0.5	50	50	ENSMUST00000058762.15	ENSMUSG00000026335.17	Pam	chr1	protein_coding	peptidylglycine alpha-amidating monooxygenase
chr1	97782625	97811851	-	97780957	97811851	A3SS	0.33	50	50	ENSMUST00000161567.8	ENSMUSG00000026335.17	Pam	chr1	protein_coding	peptidylglycine alpha-amidating monooxygenase
chr1	97753762	97759180	-	97749713	97759180	A3SS	0.33	50	50	ENSMUST00000162681.2	ENSMUSG00000026335.17	Pam	chr1	protein_coding	peptidylglycine alpha-amidating monooxygenase
chr1	97753765	97759180	-	97749713	97759180	A3SS	0.33	50	50	ENSMUST00000162681.2	ENSMUSG00000026335.17	Pam	chr1	protein_coding	peptidylglycine alpha-amidating monooxygenase
chr1	97749713	97750661	-	97749713	97759180	A5SS	0.5	50	50	ENSMUST00000162681.2	ENSMUSG00000026335.17	Pam	chr1	protein_coding	peptidylglycine alpha-amidating monooxygenase
chr1	97780957	97811851	-	97780957	97791928	5pMXE	0.5	50	50	ENSMUST00000161071.2	ENSMUSG00000026335.17	Pam	chr1	protein_coding	peptidylglycine alpha-amidating monooxygenase
chr1	97959749	97983586	-	97959749	97960841	5pMXE	0.5	50	50	ENSMUST00000160588.2	ENSMUSG00000089706.8	B230216N24Rik	chr1	lncRNA	RIKEN cDNA B230216N24 gene
chr1	97959833	97960841	-	97959749	97960841	A3SS	0.33	50	50	ENSMUST00000160588.2	ENSMUSG00000089706.8	B230216N24Rik	chr1	lncRNA	RIKEN cDNA B230216N24 gene
chr1	97959893	97960841	-	97959749	97960841	A3SS	0.33	50	50	ENSMUST00000160588.2	ENSMUSG00000089706.8	B230216N24Rik	chr1	lncRNA	RIKEN cDNA B230216N24 gene
chr1	97960940;97968038	97967964;97975427	-	97960940	97975427	cassetteExon	0.5	100	100	ENSMUST00000159324.8	ENSMUSG00000089706.8	B230216N24Rik	chr1	lncRNA	RIKEN cDNA B230216N24 gene
chr1	97959893	97960841	-	97959833	97960841	A3SS	0.33	50	50	ENSMUST00000159324.8	ENSMUSG00000089706.8	B230216N24Rik	chr1	lncRNA	RIKEN cDNA B230216N24 gene
chr1	98061326	98062018	+	98061326	98071022	A3SS	0.5	50	50	ENSMUST00000186473.2	ENSMUSG00000100182.7	1810006J02Rik	chr1	lncRNA	RIKEN cDNA 1810006J02 gene
chr1	98427621	98436944	+	98427621;98435370	98435238;98436944	ES	0.33	50	50	ENSMUST00000027575.13	ENSMUSG00000026336.14	Slco6d1	chr1	protein_coding	solute carrier organic anion transporter family, member 6d1
chr1	98374547;98391792	98391573;98394383	+	98374547	98394383	cassetteExon	0.5	100	100	ENSMUST00000027575.13	ENSMUSG00000026336.14	Slco6d1	chr1	protein_coding	solute carrier organic anion transporter family, member 6d1
chr1	98349222	98350943	+	98349222	98350814	A3SS	0.5	50	50	ENSMUST00000027575.13	ENSMUSG00000026336.14	Slco6d1	chr1	protein_coding	solute carrier organic anion transporter family, member 6d1
chr1	98435334	98436944	+	98435370	98436944	A5SS	0.33	50	50	ENSMUST00000027575.13	ENSMUSG00000026336.14	Slco6d1	chr1	protein_coding	solute carrier organic anion transporter family, member 6d1
chr1	98427621	98436944	+	98427621	98435238	A3SS&ES	0.5	50	50	ENSMUST00000162468.8	ENSMUSG00000026336.14	Slco6d1	chr1	protein_coding	solute carrier organic anion transporter family, member 6d1
chr1	98435334	98436944	+	98435334	98444095	A3SS	0.5	50	50	ENSMUST00000162468.8	ENSMUSG00000026336.14	Slco6d1	chr1	protein_coding	solute carrier organic anion transporter family, member 6d1
chr1	98427621;98435334	98435238;98436944	+	98427621	98436944	cassetteExon	0.5	100	100	ENSMUST00000160796.2	ENSMUSG00000026336.14	Slco6d1	chr1	protein_coding	solute carrier organic anion transporter family, member 6d1
chr1	98517382	98532856	+	98517382;98525118	98524973;98532856	ES	0.5	50	50	ENSMUST00000191409.7	ENSMUSG00000100009.7	Gm7967	chr1	lncRNA	predicted gene 7967
chr1	98532912	98534668	+	98532912;98533705	98533443;98534668	ES	0.5	50	50	ENSMUST00000191409.7	ENSMUSG00000100009.7	Gm7967	chr1	lncRNA	predicted gene 7967
chr1	100297609	100306776	+	100297609;100297953	100297783;100306776	ES	0.5	50	50	ENSMUST00000086738.10	ENSMUSG00000067028.12	Cntnap5b	chr1	protein_coding	contactin associated protein-like 5B
chr1	100025602	100068899	+	100025599	100068899	A5SS	0.5	50	50	ENSMUST00000086738.10	ENSMUSG00000067028.12	Cntnap5b	chr1	protein_coding	contactin associated protein-like 5B
chr1	100180435	100182784	+	100141498	100182784	A5SS	0.5	50	50	ENSMUST00000086738.10	ENSMUSG00000067028.12	Cntnap5b	chr1	protein_coding	contactin associated protein-like 5B
chr1	105212679	105284068	-	105212679;105282888	105282766;105284068	ES	0.5	50	50	ENSMUST00000058688.7	ENSMUSG00000047496.7	Rnf152	chr1	protein_coding	ring finger protein 152
chr1	105284682	105289314	+	105284974	105289314	A5SS	0.5	50	50	ENSMUST00000181383.3	ENSMUSG00000097482.3	Gm17634	chr1	lncRNA	predicted gene, 17634
chr1	105493975	105496501	-	105334631	105496501	A3SS	0.5	50	50	ENSMUST00000188743.2	ENSMUSG00000101214.2	Gm28403	chr1	lncRNA	predicted gene 28403
chr1	105585575	105587018	-	105585575	105586612	5pMXE	0.33	50	50	ENSMUST00000070699.15	ENSMUSG00000056536.15	Pign	chr1	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class N
chr1	105481624	105485188	-	105482224	105485188	A3SS&ES	0.33	50	50	ENSMUST00000070699.15	ENSMUSG00000056536.15	Pign	chr1	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class N
chr1	105484790	105485188	-	105482224	105485188	A3SS	0.33	50	50	ENSMUST00000070699.15	ENSMUSG00000056536.15	Pign	chr1	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class N
chr1	105556325	105565235	-	105526852	105565235	A3SS	0.5	50	50	ENSMUST00000070699.15	ENSMUSG00000056536.15	Pign	chr1	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class N
chr1	105493975	105494229	-	105493975	105507647	A5SS	0.33	50	50	ENSMUST00000070699.15	ENSMUSG00000056536.15	Pign	chr1	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class N
chr1	105493975	105496501	-	105493975	105507647	A5SS	0.33	50	50	ENSMUST00000070699.15	ENSMUSG00000056536.15	Pign	chr1	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class N
chr1	105585575	105586641	-	105585575	105586612	A5SS	0.33	50	50	ENSMUST00000070699.15	ENSMUSG00000056536.15	Pign	chr1	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class N
chr1	105585575	105587018	-	105585575;105586731	105586612;105587018	ES	0.5	50	50	ENSMUST00000186485.7	ENSMUSG00000056536.15	Pign	chr1	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class N
chr1	105493975	105496501	-	105493975	105494229	A5SS	0.33	50	50	ENSMUST00000190945.7	ENSMUSG00000056536.15	Pign	chr1	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class N
chr1	105484790	105485188	-	105481624	105485188	A3SS	0.33	50	50	ENSMUST00000187537.7	ENSMUSG00000056536.15	Pign	chr1	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class N
chr1	105585575;105586731	105586641;105587018	-	105585575	105587018	cassetteExon	0.5	100	100	ENSMUST00000185983.7	ENSMUSG00000056536.15	Pign	chr1	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class N
chr1	105585575	105587018	-	105586731	105587018	3pMXE	0.5	50	50	ENSMUST00000187909.2	ENSMUSG00000056536.15	Pign	chr1	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class N
chr1	105605977	105614674	+	105605977;105608820	105608764;105614674	ES	0.5	50	50	ENSMUST00000189091.7	ENSMUSG00000026319.14	Relch	chr1	protein_coding	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing
chr1	105592358	105605888	+	105591708	105605888	A5SS	0.5	50	50	ENSMUST00000189091.7	ENSMUSG00000026319.14	Relch	chr1	protein_coding	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing
chr1	105605977	105614855	+	105605977;105614745	105614674;105614855	ES	0.5	50	50	ENSMUST00000186807.7	ENSMUSG00000026319.14	Relch	chr1	protein_coding	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing
chr1	105663747	105668738	+	105663747;105668242	105668160;105668738	ES	0.5	50	50	ENSMUST00000186807.7	ENSMUSG00000026319.14	Relch	chr1	protein_coding	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing
chr1	105668242	105669022	+	105668242;105668820	105668738;105669022	ES	0.5	50	50	ENSMUST00000186807.7	ENSMUSG00000026319.14	Relch	chr1	protein_coding	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing
chr1	105619834;105620028	105619937;105620609	+	105619834	105620609	cassetteExon	0.5	100	100	ENSMUST00000186807.7	ENSMUSG00000026319.14	Relch	chr1	protein_coding	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing
chr1	105641664;105643937	105643819;105644503	+	105641664	105644503	cassetteExon	0.5	100	100	ENSMUST00000186807.7	ENSMUSG00000026319.14	Relch	chr1	protein_coding	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing
chr1	105592358	105592699	+	105592358	105605888	A3SS	0.5	50	50	ENSMUST00000186807.7	ENSMUSG00000026319.14	Relch	chr1	protein_coding	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing
chr1	105663747;105668820	105668738;105669022	+	105663747;105668242	105668160;105669022	MXE	0.5	100	100	ENSMUST00000039173.13	ENSMUSG00000026319.14	Relch	chr1	protein_coding	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing
chr1	105605977	105608764	+	105605977	105614855	A3SS	0.33	50	50	ENSMUST00000190501.7	ENSMUSG00000026319.14	Relch	chr1	protein_coding	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing
chr1	105931906	105939432	+	105931906;105933816	105933745;105939432	ES	0.5	50	50	ENSMUST00000118196.8	ENSMUSG00000038866.16	Zcchc2	chr1	protein_coding	zinc finger, CCHC domain containing 2
chr1	105943823	105947578	+	105943823;105946032	105945949;105947578	ES	0.5	50	50	ENSMUST00000118196.8	ENSMUSG00000038866.16	Zcchc2	chr1	protein_coding	zinc finger, CCHC domain containing 2
chr1	105943823;105944417	105944317;105945949	+	105943823	105945949	cassetteExon	0.5	100	100	ENSMUST00000118196.8	ENSMUSG00000038866.16	Zcchc2	chr1	protein_coding	zinc finger, CCHC domain containing 2
chr1	105951488	105955118	+	105951488	105955133	A3SS	0.5	50	50	ENSMUST00000118196.8	ENSMUSG00000038866.16	Zcchc2	chr1	protein_coding	zinc finger, CCHC domain containing 2
chr1	105943823	105944317	+	105943823	105947578	A3SS	0.33	50	50	ENSMUST00000186983.7	ENSMUSG00000038866.16	Zcchc2	chr1	protein_coding	zinc finger, CCHC domain containing 2
chr1	106245187	106246579	+	106214846	106246579	A5SS	0.5	50	50	ENSMUST00000061047.7	ENSMUSG00000044340.8	Phlpp1	chr1	protein_coding	PH domain and leucine rich repeat protein phosphatase 1
chr1	106470401	106495443	+	106470401	106485710	3pMXE	0.5	50	50	ENSMUST00000144260.8	ENSMUSG00000054006.15	D630008O14Rik	chr1	lncRNA	RIKEN cDNA D630008O14 gene
chr1	106470169	106470341	+	106470169	106470344	A3SS	0.5	50	50	ENSMUST00000144260.8	ENSMUSG00000054006.15	D630008O14Rik	chr1	lncRNA	RIKEN cDNA D630008O14 gene
chr1	106713758	106714433	-	106710515	106714433	A3SS	0.5	50	50	ENSMUST00000112736.8	ENSMUSG00000009907.18	Vps4b	chr1	protein_coding	vacuolar protein sorting 4B
chr1	106788990	106799980	+	106788990;106798180	106798012;106799980	ES	0.5	50	50	ENSMUST00000086701.13	ENSMUSG00000067006.13	Serpinb5	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 5
chr1	106788990;106797338	106797209;106798012	+	106788990	106798012	cassetteExon	0.5	100	100	ENSMUST00000086701.13	ENSMUSG00000067006.13	Serpinb5	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 5
chr1	106788990	106797209	+	106788990	106799980	A3SS	0.33	50	50	ENSMUST00000188745.3	ENSMUSG00000067006.13	Serpinb5	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 5
chr1	106788990	106799980	+	106798180	106799980	5pMXE	0.5	50	50	ENSMUST00000112729.3	ENSMUSG00000067006.13	Serpinb5	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 5
chr1	106866732	106874259	+	106862294	106874259	A5SS	0.5	50	50	ENSMUST00000081277.9	ENSMUSG00000059956.15	Serpinb12	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 12
chr1	106923647	106926296	+	106923647;106924127	106924010;106926296	ES	0.5	50	50	ENSMUST00000027564.8	ENSMUSG00000048775.11	Serpinb13	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 13
chr1	106910599;106921847	106921783;106923519	+	106910599	106923519	cassetteExon	0.5	100	100	ENSMUST00000027564.8	ENSMUSG00000048775.11	Serpinb13	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 13
chr1	107087532	107206057	-	107087532	107088810	5pMXE	0.5	50	50	ENSMUST00000086694.11	ENSMUSG00000073602.11	Serpinb3b	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 3B
chr1	107204769	107206057	-	107087532	107206057	A3SS	0.5	50	50	ENSMUST00000166100.2	ENSMUSG00000073602.11	Serpinb3b	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 3B
chr1	107350462	107355961	+	107327454	107355961	A5SS	0.5	50	50	ENSMUST00000154538.8	ENSMUSG00000067001.12	Serpinb7	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 7
chr1	107439314	107443194	+	107439208	107443194	A5SS	0.5	50	50	ENSMUST00000009356.11	ENSMUSG00000062345.11	Serpinb2	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 2
chr1	107452341;107456821	107456741;107460093	+	107452341	107460093	cassetteExon	0.5	100	100	ENSMUST00000143832.8	ENSMUSG00000062345.11	Serpinb2	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 2
chr1	107452341;107456821	107456741;107463175	+	107452341;107460268	107460093;107463175	MXE	0.5	100	100	ENSMUST00000143832.8	ENSMUSG00000062345.11	Serpinb2	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 2
chr1	107456821	107463175	+	107456821	107460093	3pMXE	0.5	50	50	ENSMUST00000146597.2	ENSMUSG00000062345.11	Serpinb2	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 2
chr1	107456821;107460268	107460093;107463175	+	107456821	107463175	cassetteExon	0.5	100	100	ENSMUST00000182198.8	ENSMUSG00000092572.8	Serpinb10	chr1	polymorphic_pseudogene	serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 10
chr1	107452341	107460093	+	107456821	107460093	5pMXE	0.5	50	50	ENSMUST00000172762.2	ENSMUSG00000092572.8	Serpinb10	chr1	polymorphic_pseudogene	serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 10
chr1	107456821	107463175	+	107460268	107463175	5pMXE	0.5	50	50	ENSMUST00000194951.2	ENSMUSG00000092572.8	Serpinb10	chr1	polymorphic_pseudogene	serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 10
chr1	107518017	107525185	+	107518017	107525190	A3SS	0.5	50	50	ENSMUST00000000514.11	ENSMUSG00000026315.14	Serpinb8	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 8
chr1	107533666	107534740	+	107533666	107534651	A3SS	0.5	50	50	ENSMUST00000000514.11	ENSMUSG00000026315.14	Serpinb8	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 8
chr1	107845082;107864552	107864439;107865288	+	107845082	107865288	cassetteExon	0.5	100	100	ENSMUST00000189845.7	ENSMUSG00000100457.7	D830032E09Rik	chr1	lncRNA	RIKEN cDNA D830032E09 gene
chr1	107845082	107865288	+	107864552	107865288	5pMXE	0.5	50	50	ENSMUST00000189497.2	ENSMUSG00000100457.7	D830032E09Rik	chr1	lncRNA	RIKEN cDNA D830032E09 gene
chr1	107865395	107869438	+	107865395	107890049	A3SS	0.5	50	50	ENSMUST00000189497.2	ENSMUSG00000100457.7	D830032E09Rik	chr1	lncRNA	RIKEN cDNA D830032E09 gene
chr1	109910781	109911373	+	109911061	109911373	A5SS&ES	0.5	50	50	ENSMUST00000137092.8	ENSMUSG00000026312.18	Cdh7	chr1	protein_coding	cadherin 7, type 2
chr1	109910781	109921716	+	109911621	109921716	A5SS&ES	0.33	50	50	ENSMUST00000137092.8	ENSMUSG00000026312.18	Cdh7	chr1	protein_coding	cadherin 7, type 2
chr1	109911102	109921716	+	109911621	109921716	A5SS&ES	0.33	50	50	ENSMUST00000137092.8	ENSMUSG00000026312.18	Cdh7	chr1	protein_coding	cadherin 7, type 2
chr1	109910781	109921716	+	109910781;109911621	109911373;109921716	ES	0.33	50	50	ENSMUST00000112701.8	ENSMUSG00000026312.18	Cdh7	chr1	protein_coding	cadherin 7, type 2
chr1	109922119;109925581	109925426;109976547	+	109922119	109976547	cassetteExon	0.5	100	100	ENSMUST00000112701.8	ENSMUSG00000026312.18	Cdh7	chr1	protein_coding	cadherin 7, type 2
chr1	110036685;110039381	110039327;110065592	+	110036685	110065592	cassetteExon	0.5	100	100	ENSMUST00000112701.8	ENSMUSG00000026312.18	Cdh7	chr1	protein_coding	cadherin 7, type 2
chr1	109910781	109911351	+	109910781	109911373	A3SS	0.33	50	50	ENSMUST00000112701.8	ENSMUSG00000026312.18	Cdh7	chr1	protein_coding	cadherin 7, type 2
chr1	109910781;109911621	109911351;109921716	+	109910781	109921716	cassetteExon	0.5	100	100	ENSMUST00000129923.2	ENSMUSG00000026312.18	Cdh7	chr1	protein_coding	cadherin 7, type 2
chr1	109911102	109921716	+	109910781	109921716	A5SS	0.33	50	50	ENSMUST00000129923.2	ENSMUSG00000026312.18	Cdh7	chr1	protein_coding	cadherin 7, type 2
chr1	110878227	110882299	-	110877145	110882299	A3SS	0.5	50	50	ENSMUST00000094626.5	ENSMUSG00000047216.9	Cdh19	chr1	protein_coding	cadherin 19, type 2
chr1	111791370	111792126	-	111791370	111791825	A5SS	0.5	50	50	ENSMUST00000186365.2	ENSMUSG00000038702.7	Dsel	chr1	protein_coding	dermatan sulfate epimerase-like
chr1	111791370;111791961	111791825;111792126	-	111791370	111792126	cassetteExon	0.5	100	100	ENSMUST00000189731.2	ENSMUSG00000038702.7	Dsel	chr1	protein_coding	dermatan sulfate epimerase-like
chr1	111791370	111792126	-	111791961	111792126	3pMXE	0.5	50	50	ENSMUST00000189370.2	ENSMUSG00000038702.7	Dsel	chr1	protein_coding	dermatan sulfate epimerase-like
chr1	115607562	115612305	-	115607562;115611307	115611128;115612305	ES	0.5	50	50	ENSMUST00000186137.7	ENSMUSG00000100515.7	Gm17916	chr1	transcribed_processed_pseudogene	predicted gene, 17916
chr1	118228767	118232930	-	118228767;118232500	118232421;118232930	ES	0.5	50	50	ENSMUST00000027623.9	ENSMUSG00000026374.15	Tsn	chr1	protein_coding	translin
chr1	118237596	118238963	-	118237596	118238731	A5SS	0.5	50	50	ENSMUST00000027623.9	ENSMUSG00000026374.15	Tsn	chr1	protein_coding	translin
chr1	118228767	118232930	-	118232500	118232930	3pMXE	0.5	50	50	ENSMUST00000189768.7	ENSMUSG00000026374.15	Tsn	chr1	protein_coding	translin
chr1	118249727	118255355	+	118249727;118251455	118251312;118255355	ES	0.5	50	50	ENSMUST00000027626.13	ENSMUSG00000026377.13	Nifk	chr1	protein_coding	nucleolar protein interacting with the FHA domain of MKI67
chr1	118249957	118251312	+	118249727	118251312	A5SS	0.5	50	50	ENSMUST00000027626.13	ENSMUSG00000026377.13	Nifk	chr1	protein_coding	nucleolar protein interacting with the FHA domain of MKI67
chr1	118429124	118431550	+	118429124;118430728	118430583;118431550	ES	0.33	50	50	ENSMUST00000049404.13	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118449664	118453027	+	118449664;118451077	118451051;118453027	ES	0.5	50	50	ENSMUST00000049404.13	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118453185	118466996	+	118453185;118459815	118459708;118466996	ES	0.33	50	50	ENSMUST00000049404.13	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118473186	118475595	+	118473186;118475388	118475386;118475595	ES	0.5	50	50	ENSMUST00000049404.13	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118488847	118498579	+	118488847;118492989	118492873;118498579	ES	0.5	50	50	ENSMUST00000049404.13	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118438106;118439952	118439905;118449557	+	118438106	118449557	cassetteExon	0.5	100	100	ENSMUST00000049404.13	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118438106;118440458	118440435;118449557	+	118438106	118449557	cassetteExon	0.5	100	100	ENSMUST00000049404.13	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118453185;118463927	118463865;118466996	+	118453185;118459815	118459708;118466996	MXE	0.5	100	100	ENSMUST00000049404.13	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118459815;118463927	118463865;118466996	+	118459815	118466996	cassetteExon	0.5	100	100	ENSMUST00000049404.13	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118467099;118469428	118469405;118470832	+	118467099	118470832	cassetteExon	0.5	100	100	ENSMUST00000049404.13	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118473186;118474679	118474611;118475386	+	118473186	118475386	cassetteExon	0.5	100	100	ENSMUST00000049404.13	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118479886;118483116	118483015;118487716	+	118479886	118487716	cassetteExon	0.5	100	100	ENSMUST00000049404.13	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118437351	118437903	+	118437351	118437936	A3SS	0.5	50	50	ENSMUST00000049404.13	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118397626	118399502	+	118395707	118399502	A5SS	0.2	50	50	ENSMUST00000049404.13	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118397636	118399502	+	118395707	118399502	A5SS	0.2	50	50	ENSMUST00000049404.13	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118398461	118399502	+	118395707	118399502	A5SS	0.2	50	50	ENSMUST00000049404.13	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118409822	118425364	+	118399569	118425364	A5SS	0.5	50	50	ENSMUST00000049404.13	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118430699	118431550	+	118430728	118431550	A5SS	0.33	50	50	ENSMUST00000049404.13	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118467513	118470832	+	118467099	118470832	A5SS	0.33	50	50	ENSMUST00000049404.13	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118453185;118459815	118459708;118473123	+	118453185;118471076	118466996;118473123	MXE	0.5	100	100	ENSMUST00000178710.8	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118453185;118463927	118463865;118466996	+	118453185	118466996	cassetteExon	0.5	100	100	ENSMUST00000178710.8	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118469428	118470835	+	118469428	118470832	A3SS	0.5	50	50	ENSMUST00000178710.8	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118473186	118474611	+	118473186	118475595	A3SS	0.33	50	50	ENSMUST00000178710.8	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118467513	118470832	+	118469428	118470832	A5SS&ES	0.33	50	50	ENSMUST00000178710.8	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118453185	118463865	+	118453185;118459815	118459708;118463865	ES	0.5	50	50	ENSMUST00000070989.14	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118438106;118439952	118439905;118449557	+	118438106;118440458	118440435;118449557	MXE	0.5	100	100	ENSMUST00000190571.7	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118429124	118431550	+	118429124	118430583	3pMXE	0.5	50	50	ENSMUST00000189676.7	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118347648	118387531	+	118347648	118399502	A3SS	0.5	50	50	ENSMUST00000190733.7	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118395707	118399502	+	118347648	118399502	A5SS	0.2	50	50	ENSMUST00000190733.7	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118397626	118399502	+	118347648	118399502	A5SS	0.2	50	50	ENSMUST00000190733.7	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118397636	118399502	+	118347648	118399502	A5SS	0.2	50	50	ENSMUST00000190733.7	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118398461	118399502	+	118347648	118399502	A5SS	0.2	50	50	ENSMUST00000190733.7	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118467099	118470832	+	118467099	118469405	A3SS&ES	0.5	50	50	ENSMUST00000187713.7	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118397636	118399502	+	118397626	118399502	A5SS	0.2	50	50	ENSMUST00000203646.3	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118398461	118399502	+	118397626	118399502	A5SS	0.2	50	50	ENSMUST00000203646.3	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118429124;118430699	118430583;118431550	+	118429124	118431550	cassetteExon	0.5	100	100	ENSMUST00000204886.3	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118398461	118399502	+	118397636	118399502	A5SS	0.2	50	50	ENSMUST00000204886.3	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118438106	118449557	+	118440458	118449557	5pMXE	0.33	50	50	ENSMUST00000205176.2	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118439952	118449557	+	118440458	118449557	5pMXE	0.33	50	50	ENSMUST00000205176.2	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118453185;118459815	118459708;118473123	+	118453185;118471076	118463865;118473123	MXE	0.5	100	100	ENSMUST00000205176.2	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118459815	118463865	+	118459815	118473123	A3SS	0.33	50	50	ENSMUST00000204325.2	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118459815	118466996	+	118459815	118473123	A3SS	0.33	50	50	ENSMUST00000204325.2	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118471076	118473123	+	118459815	118473123	A5SS	0.5	50	50	ENSMUST00000204325.2	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118473186	118475595	+	118475388	118475595	5pMXE	0.5	50	50	ENSMUST00000188441.2	ENSMUSG00000064302.14	Clasp1	chr1	protein_coding	CLIP associating protein 1
chr1	118560123	118580031	+	118560123	118565329	3pMXE	0.5	50	50	ENSMUST00000190652.2	ENSMUSG00000026380.11	Tfcp2l1	chr1	protein_coding	transcription factor CP2-like 1
chr1	118794487	118818026	-	118794487;118795911	118795709;118818026	ES	0.33	50	50	ENSMUST00000062483.15	ENSMUSG00000048402.15	Gli2	chr1	protein_coding	GLI-Kruppel family member GLI2
chr1	118795911	118929770	-	118795911;118818131	118818026;118929770	ES	0.25	50	50	ENSMUST00000062483.15	ENSMUSG00000048402.15	Gli2	chr1	protein_coding	GLI-Kruppel family member GLI2
chr1	118818131;118892290	118892180;118929770	-	118818131	118929770	cassetteExon	0.5	100	100	ENSMUST00000062483.15	ENSMUSG00000048402.15	Gli2	chr1	protein_coding	GLI-Kruppel family member GLI2
chr1	118782338	118783166	-	118782387	118783166	A3SS	0.5	50	50	ENSMUST00000062483.15	ENSMUSG00000048402.15	Gli2	chr1	protein_coding	GLI-Kruppel family member GLI2
chr1	118818131	118910198	-	118818131	118929770	A5SS	0.33	50	50	ENSMUST00000062483.15	ENSMUSG00000048402.15	Gli2	chr1	protein_coding	GLI-Kruppel family member GLI2
chr1	118818131	118910198	-	118818131	118892180	A5SS&ES	0.33	50	50	ENSMUST00000161301.8	ENSMUSG00000048402.15	Gli2	chr1	protein_coding	GLI-Kruppel family member GLI2
chr1	118783367	118929770	-	118783367;118818131	118818026;118929770	ES	0.25	50	50	ENSMUST00000162552.8	ENSMUSG00000048402.15	Gli2	chr1	protein_coding	GLI-Kruppel family member GLI2
chr1	118783367;118794487	118794302;118818026	-	118783367	118818026	cassetteExon	0.5	100	100	ENSMUST00000162552.8	ENSMUSG00000048402.15	Gli2	chr1	protein_coding	GLI-Kruppel family member GLI2
chr1	118783367;118794487	118794302;118981032	-	118783367;118929936	118818026;118981032	MXE	0.5	100	100	ENSMUST00000162552.8	ENSMUSG00000048402.15	Gli2	chr1	protein_coding	GLI-Kruppel family member GLI2
chr1	118795911	118818026	-	118783367	118818026	A3SS	0.33	50	50	ENSMUST00000162552.8	ENSMUSG00000048402.15	Gli2	chr1	protein_coding	GLI-Kruppel family member GLI2
chr1	118795911	118929770	-	118818131	118929770	A3SS&ES	0.25	50	50	ENSMUST00000162552.8	ENSMUSG00000048402.15	Gli2	chr1	protein_coding	GLI-Kruppel family member GLI2
chr1	118794487;118795911	118795709;118929770	-	118794487;118818131	118818026;118929770	MXE	0.5	100	100	ENSMUST00000161056.8	ENSMUSG00000048402.15	Gli2	chr1	protein_coding	GLI-Kruppel family member GLI2
chr1	118783367;118818131	118818026;118929770	-	118783367;118795911	118794302;118929770	MXE	0.5	100	100	ENSMUST00000160991.8	ENSMUSG00000048402.15	Gli2	chr1	protein_coding	GLI-Kruppel family member GLI2
chr1	118892290	118929770	-	118795911	118929770	A3SS	0.25	50	50	ENSMUST00000160991.8	ENSMUSG00000048402.15	Gli2	chr1	protein_coding	GLI-Kruppel family member GLI2
chr1	118783367;118794487	118794302;118981032	-	118783367;118929936	118929770;118981032	MXE	0.5	100	100	ENSMUST00000161451.8	ENSMUSG00000048402.15	Gli2	chr1	protein_coding	GLI-Kruppel family member GLI2
chr1	118795911	118929770	-	118783367	118929770	A3SS	0.25	50	50	ENSMUST00000161451.8	ENSMUSG00000048402.15	Gli2	chr1	protein_coding	GLI-Kruppel family member GLI2
chr1	118892290	118929770	-	118783367	118929770	A3SS	0.25	50	50	ENSMUST00000161451.8	ENSMUSG00000048402.15	Gli2	chr1	protein_coding	GLI-Kruppel family member GLI2
chr1	118783367	118818026	-	118783367	118794302	A5SS&ES	0.33	50	50	ENSMUST00000162607.2	ENSMUSG00000048402.15	Gli2	chr1	protein_coding	GLI-Kruppel family member GLI2
chr1	118794487	118795709	-	118794487	118981032	A5SS	0.33	50	50	ENSMUST00000162607.2	ENSMUSG00000048402.15	Gli2	chr1	protein_coding	GLI-Kruppel family member GLI2
chr1	118794487	118818026	-	118794487	118981032	A5SS	0.33	50	50	ENSMUST00000162607.2	ENSMUSG00000048402.15	Gli2	chr1	protein_coding	GLI-Kruppel family member GLI2
chr1	118794487	118818026	-	118795911	118818026	3pMXE	0.33	50	50	ENSMUST00000159678.3	ENSMUSG00000048402.15	Gli2	chr1	protein_coding	GLI-Kruppel family member GLI2
chr1	119257111	119308889	+	119257111	119265117	3pMXE	0.5	50	50	ENSMUST00000186697.2	ENSMUSG00000101179.2	Gm29455	chr1	lncRNA	predicted gene 29455
chr1	119400154	119403625	-	119399555	119403625	A3SS	0.5	50	50	ENSMUST00000004565.15	ENSMUSG00000004451.15	Ralb	chr1	protein_coding	v-ral simian leukemia viral oncogene B
chr1	119548449	119551656	-	119548449;119549694	119549616;119551656	ES	0.5	50	50	ENSMUST00000052404.13	ENSMUSG00000026383.15	Epb41l5	chr1	protein_coding	erythrocyte membrane protein band 4.1 like 5
chr1	119523789	119526735	-	119506807	119526735	A3SS	0.5	50	50	ENSMUST00000052404.13	ENSMUSG00000026383.15	Epb41l5	chr1	protein_coding	erythrocyte membrane protein band 4.1 like 5
chr1	119527991	119532958	-	119527967	119532958	A3SS	0.5	50	50	ENSMUST00000052404.13	ENSMUSG00000026383.15	Epb41l5	chr1	protein_coding	erythrocyte membrane protein band 4.1 like 5
chr1	119570388	119576084	-	119570388	119576515	A5SS	0.33	50	50	ENSMUST00000052404.13	ENSMUSG00000026383.15	Epb41l5	chr1	protein_coding	erythrocyte membrane protein band 4.1 like 5
chr1	119570388	119576147	-	119570388	119576515	A5SS	0.33	50	50	ENSMUST00000052404.13	ENSMUSG00000026383.15	Epb41l5	chr1	protein_coding	erythrocyte membrane protein band 4.1 like 5
chr1	119570388	119576084	-	119570388	119576147	A5SS	0.33	50	50	ENSMUST00000027632.14	ENSMUSG00000026383.15	Epb41l5	chr1	protein_coding	erythrocyte membrane protein band 4.1 like 5
chr1	119548449	119551656	-	119549694	119551656	3pMXE	0.5	50	50	ENSMUST00000187194.2	ENSMUSG00000026383.15	Epb41l5	chr1	protein_coding	erythrocyte membrane protein band 4.1 like 5
chr1	119610275	119612197	-	119610275;119610525	119610435;119612197	ES	0.5	50	50	ENSMUST00000064091.12	ENSMUSG00000026384.14	Ptpn4	chr1	protein_coding	protein tyrosine phosphatase, non-receptor type 4
chr1	119634043	119643677	-	119634043;119635631	119635506;119643677	ES	0.5	50	50	ENSMUST00000064091.12	ENSMUSG00000026384.14	Ptpn4	chr1	protein_coding	protein tyrosine phosphatase, non-receptor type 4
chr1	119649766	119669085	-	119649766;119653826	119653763;119669085	ES	0.5	50	50	ENSMUST00000064091.12	ENSMUSG00000026384.14	Ptpn4	chr1	protein_coding	protein tyrosine phosphatase, non-receptor type 4
chr1	119693211	119700779	-	119693211;119693652	119693608;119700779	ES	0.5	50	50	ENSMUST00000064091.12	ENSMUSG00000026384.14	Ptpn4	chr1	protein_coding	protein tyrosine phosphatase, non-receptor type 4
chr1	119700857	119711212	-	119700857;119701001	119700959;119711212	ES	0.33	50	50	ENSMUST00000064091.12	ENSMUSG00000026384.14	Ptpn4	chr1	protein_coding	protein tyrosine phosphatase, non-receptor type 4
chr1	119701001	119730053	-	119701001;119711319	119711212;119730053	ES	0.5	50	50	ENSMUST00000064091.12	ENSMUSG00000026384.14	Ptpn4	chr1	protein_coding	protein tyrosine phosphatase, non-receptor type 4
chr1	119617776	119619331	-	119615496	119619331	A3SS	0.5	50	50	ENSMUST00000064091.12	ENSMUSG00000026384.14	Ptpn4	chr1	protein_coding	protein tyrosine phosphatase, non-receptor type 4
chr1	119700876	119700959	-	119700857	119700959	A3SS	0.5	50	50	ENSMUST00000064091.12	ENSMUSG00000026384.14	Ptpn4	chr1	protein_coding	protein tyrosine phosphatase, non-receptor type 4
chr1	119649766	119669085	-	119653826	119669085	3pMXE	0.5	50	50	ENSMUST00000163179.8	ENSMUSG00000026384.14	Ptpn4	chr1	protein_coding	protein tyrosine phosphatase, non-receptor type 4
chr1	119701001	119730053	-	119701001	119711212	5pMXE	0.5	50	50	ENSMUST00000163179.8	ENSMUSG00000026384.14	Ptpn4	chr1	protein_coding	protein tyrosine phosphatase, non-receptor type 4
chr1	119700857	119711212	-	119701001	119711212	A3SS&ES	0.33	50	50	ENSMUST00000163179.8	ENSMUSG00000026384.14	Ptpn4	chr1	protein_coding	protein tyrosine phosphatase, non-receptor type 4
chr1	119700857;119711319	119711212;119730053	-	119700857;119701001	119700959;119730053	MXE	0.5	100	100	ENSMUST00000168429.8	ENSMUSG00000026384.14	Ptpn4	chr1	protein_coding	protein tyrosine phosphatase, non-receptor type 4
chr1	119693211;119700857	119700779;119711212	-	119693211;119693652	119693608;119711212	MXE	0.5	100	100	ENSMUST00000166422.8	ENSMUSG00000026384.14	Ptpn4	chr1	protein_coding	protein tyrosine phosphatase, non-receptor type 4
chr1	119693652;119700857	119700779;119711212	-	119693652	119711212	cassetteExon	0.5	100	100	ENSMUST00000166422.8	ENSMUSG00000026384.14	Ptpn4	chr1	protein_coding	protein tyrosine phosphatase, non-receptor type 4
chr1	119693211;119701001	119700779;119711212	-	119693211;119693652	119693608;119711212	MXE	0.5	100	100	ENSMUST00000166422.8	ENSMUSG00000026384.14	Ptpn4	chr1	protein_coding	protein tyrosine phosphatase, non-receptor type 4
chr1	119693652;119701001	119700779;119711212	-	119693652	119711212	cassetteExon	0.5	100	100	ENSMUST00000166422.8	ENSMUSG00000026384.14	Ptpn4	chr1	protein_coding	protein tyrosine phosphatase, non-receptor type 4
chr1	119693211;119701001	119700779;119730053	-	119693211;119711319	119693608;119730053	MXE	0.5	100	100	ENSMUST00000166422.8	ENSMUSG00000026384.14	Ptpn4	chr1	protein_coding	protein tyrosine phosphatase, non-receptor type 4
chr1	119693652;119701001	119700779;119730053	-	119693652;119711319	119711212;119730053	MXE	0.5	100	100	ENSMUST00000166422.8	ENSMUSG00000026384.14	Ptpn4	chr1	protein_coding	protein tyrosine phosphatase, non-receptor type 4
chr1	119693652	119711212	-	119700857	119711212	3pMXE	0.33	50	50	ENSMUST00000163621.2	ENSMUSG00000026384.14	Ptpn4	chr1	protein_coding	protein tyrosine phosphatase, non-receptor type 4
chr1	119922987	119924909	-	119922987	119924786	A5SS	0.5	50	50	ENSMUST00000174370.8	ENSMUSG00000036962.13	Cfap221	chr1	protein_coding	cilia and flagella associated protein 221
chr1	119950002	119959294	+	119950002;119950240	119950196;119959294	ES	0.5	50	50	ENSMUST00000072886.11	ENSMUSG00000026387.16	Sctr	chr1	protein_coding	secretin receptor
chr1	119989665	119990848	+	119989665	119990842	A3SS	0.5	50	50	ENSMUST00000072886.11	ENSMUSG00000026387.16	Sctr	chr1	protein_coding	secretin receptor
chr1	120044178	120047519	-	120044178	120047625	A5SS	0.5	50	50	ENSMUST00000027634.13	ENSMUSG00000026385.17	Dbi	chr1	protein_coding	diazepam binding inhibitor
chr1	120047742	120047851	-	120047742	120048675	A5SS	0.33	50	50	ENSMUST00000027634.13	ENSMUSG00000026385.17	Dbi	chr1	protein_coding	diazepam binding inhibitor
chr1	120047742	120048492	-	120047742	120048675	A5SS	0.33	50	50	ENSMUST00000027634.13	ENSMUSG00000026385.17	Dbi	chr1	protein_coding	diazepam binding inhibitor
chr1	120047742	120048492	-	120047742	120047851	5pMXE	0.33	50	50	ENSMUST00000128408.8	ENSMUSG00000026385.17	Dbi	chr1	protein_coding	diazepam binding inhibitor
chr1	120093902;120099212	120099131;120115771	+	120093902	120115771	cassetteExon	0.5	100	100	ENSMUST00000027637.13	ENSMUSG00000026388.16	3110009E18Rik	chr1	protein_coding	RIKEN cDNA 3110009E18 gene
chr1	120088386	120092495	+	120088386	120093865	A3SS	0.5	50	50	ENSMUST00000027637.13	ENSMUSG00000026388.16	3110009E18Rik	chr1	protein_coding	RIKEN cDNA 3110009E18 gene
chr1	120093902	120096771	+	120093902	120115771	A3SS	0.33	50	50	ENSMUST00000027637.13	ENSMUSG00000026388.16	3110009E18Rik	chr1	protein_coding	RIKEN cDNA 3110009E18 gene
chr1	120048947	120078333	+	120049540	120078333	A5SS	0.5	50	50	ENSMUST00000027637.13	ENSMUSG00000026388.16	3110009E18Rik	chr1	protein_coding	RIKEN cDNA 3110009E18 gene
chr1	120093902	120096771	+	120093902	120099131	A3SS	0.33	50	50	ENSMUST00000112644.9	ENSMUSG00000026388.16	3110009E18Rik	chr1	protein_coding	RIKEN cDNA 3110009E18 gene
chr1	120099212	120100788	+	120099212	120115771	A3SS	0.5	50	50	ENSMUST00000112644.9	ENSMUSG00000026388.16	3110009E18Rik	chr1	protein_coding	RIKEN cDNA 3110009E18 gene
chr1	120171997	120197713	-	120171997	120192962	5pMXE	0.33	50	50	ENSMUST00000140490.8	ENSMUSG00000026389.17	Steap3	chr1	protein_coding	STEAP family member 3
chr1	120171997	120197855	-	120171997	120192962	5pMXE	0.33	50	50	ENSMUST00000140490.8	ENSMUSG00000026389.17	Steap3	chr1	protein_coding	STEAP family member 3
chr1	120155658	120161972	-	120118557	120161972	A3SS	0.5	50	50	ENSMUST00000140490.8	ENSMUSG00000026389.17	Steap3	chr1	protein_coding	STEAP family member 3
chr1	120197989	120200167	-	120197989	120198668	5pMXE	0.5	50	50	ENSMUST00000112641.8	ENSMUSG00000026389.17	Steap3	chr1	protein_coding	STEAP family member 3
chr1	120171997	120197855	-	120171997	120197713	A5SS	0.33	50	50	ENSMUST00000112641.8	ENSMUSG00000026389.17	Steap3	chr1	protein_coding	STEAP family member 3
chr1	120421384	120422470	-	120421384;120421991	120421773;120422470	ES	0.5	50	50	ENSMUST00000027639.8	ENSMUSG00000026390.8	Marco	chr1	protein_coding	macrophage receptor with collagenous structure
chr1	121015285	121041487	+	121015285;121026816	121026768;121041487	ES	0.5	50	50	ENSMUST00000181433.8	ENSMUSG00000097881.8	Celrr	chr1	lncRNA	cerebellum expressed regulatory RNA
chr1	121015285	121015496	+	121015285	121026768	A3SS	0.33	50	50	ENSMUST00000181433.8	ENSMUSG00000097881.8	Celrr	chr1	lncRNA	cerebellum expressed regulatory RNA
chr1	121015285	121015496	+	121015285	121041487	A3SS	0.33	50	50	ENSMUST00000190612.2	ENSMUSG00000097881.8	Celrr	chr1	lncRNA	cerebellum expressed regulatory RNA
chr1	121015285	121015496	+	121015285	121064930	A3SS	0.25	50	50	ENSMUST00000185678.2	ENSMUSG00000097881.8	Celrr	chr1	lncRNA	cerebellum expressed regulatory RNA
chr1	121015285	121026768	+	121015285	121064930	A3SS	0.25	50	50	ENSMUST00000185678.2	ENSMUSG00000097881.8	Celrr	chr1	lncRNA	cerebellum expressed regulatory RNA
chr1	121015285	121041487	+	121015285	121064930	A3SS	0.25	50	50	ENSMUST00000185678.2	ENSMUSG00000097881.8	Celrr	chr1	lncRNA	cerebellum expressed regulatory RNA
chr1	121240054	121255420	-	121240054;121247701	121247326;121255420	ES	0.5	50	50	ENSMUST00000003818.14	ENSMUSG00000003721.15	Insig2	chr1	protein_coding	insulin induced gene 2
chr1	121247701	121260221	-	121247701	121255420	5pMXE	0.25	50	50	ENSMUST00000003818.14	ENSMUSG00000003721.15	Insig2	chr1	protein_coding	insulin induced gene 2
chr1	121233676	121247358	-	121233676	121234593	A5SS&ES	0.5	50	50	ENSMUST00000003818.14	ENSMUSG00000003721.15	Insig2	chr1	protein_coding	insulin induced gene 2
chr1	121247701	121255295	-	121247701	121255420	A5SS	0.25	50	50	ENSMUST00000003818.14	ENSMUSG00000003721.15	Insig2	chr1	protein_coding	insulin induced gene 2
chr1	121247701	121255450	-	121247701	121255420	A5SS	0.25	50	50	ENSMUST00000003818.14	ENSMUSG00000003721.15	Insig2	chr1	protein_coding	insulin induced gene 2
chr1	121247634	121260221	-	121247701	121260221	A3SS	0.5	50	50	ENSMUST00000071064.13	ENSMUSG00000003721.15	Insig2	chr1	protein_coding	insulin induced gene 2
chr1	121240054	121255420	-	121240054	121247326	A5SS&ES	0.5	50	50	ENSMUST00000071064.13	ENSMUSG00000003721.15	Insig2	chr1	protein_coding	insulin induced gene 2
chr1	121247701	121255295	-	121247701	121260221	A5SS	0.25	50	50	ENSMUST00000071064.13	ENSMUSG00000003721.15	Insig2	chr1	protein_coding	insulin induced gene 2
chr1	121247701	121255450	-	121247701	121260221	A5SS	0.25	50	50	ENSMUST00000071064.13	ENSMUSG00000003721.15	Insig2	chr1	protein_coding	insulin induced gene 2
chr1	121247701	121255295	-	121247701	121255450	A5SS	0.25	50	50	ENSMUST00000160968.8	ENSMUSG00000003721.15	Insig2	chr1	protein_coding	insulin induced gene 2
chr1	121247634	121260221	-	121247634	121255250	5pMXE	0.25	50	50	ENSMUST00000159085.8	ENSMUSG00000003721.15	Insig2	chr1	protein_coding	insulin induced gene 2
chr1	121247634	121250868	-	121247634	121255250	A5SS	0.25	50	50	ENSMUST00000159085.8	ENSMUSG00000003721.15	Insig2	chr1	protein_coding	insulin induced gene 2
chr1	121247634	121255295	-	121247634	121255250	A5SS	0.25	50	50	ENSMUST00000159085.8	ENSMUSG00000003721.15	Insig2	chr1	protein_coding	insulin induced gene 2
chr1	121233676;121247701	121247358;121255420	-	121233676;121240054	121234593;121255420	MXE	0.5	100	100	ENSMUST00000186915.2	ENSMUSG00000003721.15	Insig2	chr1	protein_coding	insulin induced gene 2
chr1	121234692;121247701	121247326;121255420	-	121234692;121240054	121234869;121255420	MXE	0.5	100	100	ENSMUST00000186915.2	ENSMUSG00000003721.15	Insig2	chr1	protein_coding	insulin induced gene 2
chr1	121234692	121247326	-	121234692	121234869	5pMXE	0.5	50	50	ENSMUST00000159528.2	ENSMUSG00000003721.15	Insig2	chr1	protein_coding	insulin induced gene 2
chr1	121240054	121255420	-	121247701	121255420	A3SS&ES	0.5	50	50	ENSMUST00000160688.2	ENSMUSG00000003721.15	Insig2	chr1	protein_coding	insulin induced gene 2
chr1	121240054	121247326	-	121234692	121247326	A3SS	0.5	50	50	ENSMUST00000162582.2	ENSMUSG00000003721.15	Insig2	chr1	protein_coding	insulin induced gene 2
chr1	121247634	121255295	-	121247634	121250868	5pMXE	0.25	50	50	ENSMUST00000162790.2	ENSMUSG00000003721.15	Insig2	chr1	protein_coding	insulin induced gene 2
chr1	121247634	121260221	-	121247634	121250868	5pMXE	0.25	50	50	ENSMUST00000162790.2	ENSMUSG00000003721.15	Insig2	chr1	protein_coding	insulin induced gene 2
chr1	121247634	121260221	-	121247634	121255295	5pMXE	0.25	50	50	ENSMUST00000159125.2	ENSMUSG00000003721.15	Insig2	chr1	protein_coding	insulin induced gene 2
chr1	121247701	121255295	-	121247634	121255295	A3SS	0.5	50	50	ENSMUST00000159125.2	ENSMUSG00000003721.15	Insig2	chr1	protein_coding	insulin induced gene 2
chr1	121369622	121371461	+	121369622	121373369	A3SS	0.5	50	50	ENSMUST00000036025.16	ENSMUSG00000026339.19	Ccdc93	chr1	protein_coding	coiled-coil domain containing 93
chr1	121376009	121377085	+	121376009	121383800	A3SS	0.5	50	50	ENSMUST00000036025.16	ENSMUSG00000026339.19	Ccdc93	chr1	protein_coding	coiled-coil domain containing 93
chr1	121389708	121389965	+	121389708	121389962	A3SS	0.5	50	50	ENSMUST00000036025.16	ENSMUSG00000026339.19	Ccdc93	chr1	protein_coding	coiled-coil domain containing 93
chr1	121486999	121487861	-	121487056	121487861	A3SS	0.5	50	50	ENSMUST00000001724.12	ENSMUSG00000001674.12	Ddx18	chr1	protein_coding	DEAD box helicase 18
chr1	121493897	121495297	-	121493897	121495520	A5SS	0.5	50	50	ENSMUST00000001724.12	ENSMUSG00000001674.12	Ddx18	chr1	protein_coding	DEAD box helicase 18
chr1	123832903	124773456	-	123832903	123973109	5pMXE	0.33	50	50	ENSMUST00000112606.8	ENSMUSG00000036815.18	Dpp10	chr1	protein_coding	dipeptidylpeptidase 10
chr1	123536047	123578017	-	123413854	123578017	A3SS	0.33	50	50	ENSMUST00000112606.8	ENSMUSG00000036815.18	Dpp10	chr1	protein_coding	dipeptidylpeptidase 10
chr1	123553711	123578017	-	123413854	123578017	A3SS	0.33	50	50	ENSMUST00000112606.8	ENSMUSG00000036815.18	Dpp10	chr1	protein_coding	dipeptidylpeptidase 10
chr1	123832903	123972862	-	123832903	123973109	A5SS	0.33	50	50	ENSMUST00000112606.8	ENSMUSG00000036815.18	Dpp10	chr1	protein_coding	dipeptidylpeptidase 10
chr1	123832903	124773456	-	123832903	123972862	5pMXE	0.33	50	50	ENSMUST00000112603.4	ENSMUSG00000036815.18	Dpp10	chr1	protein_coding	dipeptidylpeptidase 10
chr1	124438034	124773456	-	123832903	124773456	A3SS	0.5	50	50	ENSMUST00000239072.2	ENSMUSG00000036815.18	Dpp10	chr1	protein_coding	dipeptidylpeptidase 10
chr1	123553711	123578017	-	123536047	123578017	A3SS	0.33	50	50	ENSMUST00000187202.2	ENSMUSG00000036815.18	Dpp10	chr1	protein_coding	dipeptidylpeptidase 10
chr1	125339111	125345986	-	125339111;125344117	125343993;125345986	ES	0.5	50	50	ENSMUST00000027579.17	ENSMUSG00000026341.17	Actr3	chr1	protein_coding	ARP3 actin-related protein 3
chr1	125344117	125363022	-	125344117;125346041	125345986;125363022	ES	0.33	50	50	ENSMUST00000027579.17	ENSMUSG00000026341.17	Actr3	chr1	protein_coding	ARP3 actin-related protein 3
chr1	125346041	125362305	-	125346041	125363022	A5SS	0.5	50	50	ENSMUST00000027579.17	ENSMUSG00000026341.17	Actr3	chr1	protein_coding	ARP3 actin-related protein 3
chr1	125363194	125363390	-	125363194	125363387	A5SS	0.5	50	50	ENSMUST00000027579.17	ENSMUSG00000026341.17	Actr3	chr1	protein_coding	ARP3 actin-related protein 3
chr1	125339111	125363022	-	125339111;125346041	125345986;125363022	ES	0.33	50	50	ENSMUST00000191578.7	ENSMUSG00000026341.17	Actr3	chr1	protein_coding	ARP3 actin-related protein 3
chr1	125339111;125344117	125343993;125363022	-	125339111;125346041	125345986;125363022	MXE	0.5	100	100	ENSMUST00000191578.7	ENSMUSG00000026341.17	Actr3	chr1	protein_coding	ARP3 actin-related protein 3
chr1	125339111	125363022	-	125339111;125344117	125343993;125363022	ES	0.33	50	50	ENSMUST00000191004.7	ENSMUSG00000026341.17	Actr3	chr1	protein_coding	ARP3 actin-related protein 3
chr1	125339111	125345986	-	125344117	125345986	3pMXE	0.5	50	50	ENSMUST00000188827.2	ENSMUSG00000026341.17	Actr3	chr1	protein_coding	ARP3 actin-related protein 3
chr1	125489021	125490012	+	125488554	125490012	A5SS	0.5	50	50	ENSMUST00000190037.7	ENSMUSG00000026342.11	Slc35f5	chr1	protein_coding	solute carrier family 35, member F5
chr1	125515192	125517576	+	125515192	125517548	A3SS	0.5	50	50	ENSMUST00000027580.11	ENSMUSG00000026342.11	Slc35f5	chr1	protein_coding	solute carrier family 35, member F5
chr1	125768063	125800107	+	125605929	125800107	A5SS	0.5	50	50	ENSMUST00000027581.7	ENSMUSG00000026343.7	Gpr39	chr1	protein_coding	G protein-coupled receptor 39
chr1	125838265	125840611	-	125838265	125839576	5pMXE	0.25	50	50	ENSMUST00000159417.2	ENSMUSG00000026344.10	Lypd1	chr1	protein_coding	Ly6/Plaur domain containing 1
chr1	125838265	125840785	-	125838265	125839576	5pMXE	0.25	50	50	ENSMUST00000159417.2	ENSMUSG00000026344.10	Lypd1	chr1	protein_coding	Ly6/Plaur domain containing 1
chr1	125838265	125839040	-	125838265	125839576	A5SS	0.25	50	50	ENSMUST00000159417.2	ENSMUSG00000026344.10	Lypd1	chr1	protein_coding	Ly6/Plaur domain containing 1
chr1	125838265	125840611	-	125838265	125839040	5pMXE	0.25	50	50	ENSMUST00000162899.8	ENSMUSG00000026344.10	Lypd1	chr1	protein_coding	Ly6/Plaur domain containing 1
chr1	125838265	125840785	-	125838265	125839040	5pMXE	0.25	50	50	ENSMUST00000162899.8	ENSMUSG00000026344.10	Lypd1	chr1	protein_coding	Ly6/Plaur domain containing 1
chr1	125838265	125840785	-	125838265	125840611	5pMXE	0.25	50	50	ENSMUST00000027582.10	ENSMUSG00000026344.10	Lypd1	chr1	protein_coding	Ly6/Plaur domain containing 1
chr1	125842758	125909120	-	125842758;125904799	125904663;125909120	ES	0.5	50	50	ENSMUST00000161954.8	ENSMUSG00000049690.16	Nckap5	chr1	protein_coding	NCK-associated protein 5
chr1	125955752	126030281	-	125955752;125961701	125961510;126030281	ES	0.33	50	50	ENSMUST00000161954.8	ENSMUSG00000049690.16	Nckap5	chr1	protein_coding	NCK-associated protein 5
chr1	126376254	126456419	-	126376254	126420285	5pMXE	0.5	50	50	ENSMUST00000161954.8	ENSMUSG00000049690.16	Nckap5	chr1	protein_coding	NCK-associated protein 5
chr1	125842758;125867974	125867900;125904663	-	125842758	125904663	cassetteExon	0.5	100	100	ENSMUST00000161954.8	ENSMUSG00000049690.16	Nckap5	chr1	protein_coding	NCK-associated protein 5
chr1	125842758	125892885	-	125842758	125904663	A5SS	0.25	50	50	ENSMUST00000161954.8	ENSMUSG00000049690.16	Nckap5	chr1	protein_coding	NCK-associated protein 5
chr1	125961701	125962575	-	125961701	126030281	A5SS	0.5	50	50	ENSMUST00000161954.8	ENSMUSG00000049690.16	Nckap5	chr1	protein_coding	NCK-associated protein 5
chr1	126623551	126665675	-	126623551	126758054	A5SS	0.5	50	50	ENSMUST00000112583.8	ENSMUSG00000049690.16	Nckap5	chr1	protein_coding	NCK-associated protein 5
chr1	125955752	126030281	-	125942386	126030281	A3SS	0.33	50	50	ENSMUST00000094609.10	ENSMUSG00000049690.16	Nckap5	chr1	protein_coding	NCK-associated protein 5
chr1	125961701	126030281	-	125942386	126030281	A3SS	0.33	50	50	ENSMUST00000094609.10	ENSMUSG00000049690.16	Nckap5	chr1	protein_coding	NCK-associated protein 5
chr1	125842758	125867900	-	125842758	125909120	A5SS	0.25	50	50	ENSMUST00000094609.10	ENSMUSG00000049690.16	Nckap5	chr1	protein_coding	NCK-associated protein 5
chr1	125842758	125892885	-	125842758	125909120	A5SS	0.25	50	50	ENSMUST00000094609.10	ENSMUSG00000049690.16	Nckap5	chr1	protein_coding	NCK-associated protein 5
chr1	125942386	125950770	-	125942386	126030281	A5SS	0.5	50	50	ENSMUST00000094609.10	ENSMUSG00000049690.16	Nckap5	chr1	protein_coding	NCK-associated protein 5
chr1	125842758	125867900	-	125842758	125892885	A5SS	0.25	50	50	ENSMUST00000160736.2	ENSMUSG00000049690.16	Nckap5	chr1	protein_coding	NCK-associated protein 5
chr1	126802595	126804114	-	126800113	126804114	A3SS	0.5	50	50	ENSMUST00000186724.2	ENSMUSG00000101600.2	4930599A14Rik	chr1	lncRNA	RIKEN cDNA 4930599A14 gene
chr1	127133164;127177576	127177527;127234371	+	127133164	127234371	cassetteExon	0.5	100	100	ENSMUST00000189427.7	ENSMUSG00000036155.14	Mgat5	chr1	protein_coding	mannoside acetylglucosaminyltransferase 5
chr1	127177576	127234374	+	127177576	127234371	A3SS	0.5	50	50	ENSMUST00000038361.11	ENSMUSG00000036155.14	Mgat5	chr1	protein_coding	mannoside acetylglucosaminyltransferase 5
chr1	127133164	127234371	+	127133164	127177527	A3SS&ES	0.5	50	50	ENSMUST00000190921.2	ENSMUSG00000036155.14	Mgat5	chr1	protein_coding	mannoside acetylglucosaminyltransferase 5
chr1	127447178	127465121	-	127447178	127479063	A5SS	0.5	50	50	ENSMUST00000027585.14	ENSMUSG00000026347.14	Tmem163	chr1	protein_coding	transmembrane protein 163
chr1	127684607	127687396	+	127685836	127687396	A5SS&ES	0.5	50	50	ENSMUST00000038006.8	ENSMUSG00000026348.8	Acmsd	chr1	protein_coding	amino carboxymuconate semialdehyde decarboxylase
chr1	127681685	127701665	-	127681690	127701665	A3SS	0.5	50	50	ENSMUST00000188163.2	ENSMUSG00000102014.2	2900009J06Rik	chr1	lncRNA	RIKEN cDNA 2900009J06 gene
chr1	127725456	127725578	+	127723054	127725578	A5SS	0.5	50	50	ENSMUST00000143513.2	ENSMUSG00000026349.15	Ccnt2	chr1	protein_coding	cyclin T2
chr1	127725933	127727127	+	127725623	127727127	A5SS	0.5	50	50	ENSMUST00000112570.2	ENSMUSG00000026349.15	Ccnt2	chr1	protein_coding	cyclin T2
chr1	127748270	127756793	-	127748270;127752134	127749714;127756793	ES	0.33	50	50	ENSMUST00000208183.3	ENSMUSG00000051590.11	Map3k19	chr1	protein_coding	mitogen-activated protein kinase kinase kinase 19
chr1	127745669;127748270	127748124;127756793	-	127745669	127756793	cassetteExon	0.5	100	100	ENSMUST00000238383.2	ENSMUSG00000051590.11	Map3k19	chr1	protein_coding	mitogen-activated protein kinase kinase kinase 19
chr1	127752134	127756793	-	127745669	127756793	A3SS	0.33	50	50	ENSMUST00000238383.2	ENSMUSG00000051590.11	Map3k19	chr1	protein_coding	mitogen-activated protein kinase kinase kinase 19
chr1	127745669	127756793	-	127748270	127756793	A3SS&ES	0.33	50	50	ENSMUST00000189398.8	ENSMUSG00000051590.11	Map3k19	chr1	protein_coding	mitogen-activated protein kinase kinase kinase 19
chr1	127752134	127756793	-	127748270	127756793	A3SS	0.33	50	50	ENSMUST00000189398.8	ENSMUSG00000051590.11	Map3k19	chr1	protein_coding	mitogen-activated protein kinase kinase kinase 19
chr1	127748270	127749714	-	127748270	127756793	A5SS	0.5	50	50	ENSMUST00000189398.8	ENSMUSG00000051590.11	Map3k19	chr1	protein_coding	mitogen-activated protein kinase kinase kinase 19
chr1	127760533	127762272	-	127756836	127762272	A3SS	0.5	50	50	ENSMUST00000187653.8	ENSMUSG00000051590.11	Map3k19	chr1	protein_coding	mitogen-activated protein kinase kinase kinase 19
chr1	127756836	127758008	-	127756836	127762272	A5SS	0.5	50	50	ENSMUST00000187653.8	ENSMUSG00000051590.11	Map3k19	chr1	protein_coding	mitogen-activated protein kinase kinase kinase 19
chr1	127866885;127869351	127869331;127870111	+	127866885	127870111	cassetteExon	0.5	100	100	ENSMUST00000037649.6	ENSMUSG00000036104.13	Rab3gap1	chr1	protein_coding	RAB3 GTPase activating protein subunit 1
chr1	127801892	127802981	+	127801892	127816893	A3SS	0.5	50	50	ENSMUST00000037649.6	ENSMUSG00000036104.13	Rab3gap1	chr1	protein_coding	RAB3 GTPase activating protein subunit 1
chr1	127866427	127870154	+	127866427	127866783	A3SS&ES	0.5	50	50	ENSMUST00000037649.6	ENSMUSG00000036104.13	Rab3gap1	chr1	protein_coding	RAB3 GTPase activating protein subunit 1
chr1	128019747	128030705	-	128019747	128029990	5pMXE	0.33	50	50	ENSMUST00000086614.12	ENSMUSG00000036086.17	Zranb3	chr1	protein_coding	zinc finger, RAN-binding domain containing 3
chr1	127894070	127895615	-	127892901	127895615	A3SS	0.5	50	50	ENSMUST00000086614.12	ENSMUSG00000036086.17	Zranb3	chr1	protein_coding	zinc finger, RAN-binding domain containing 3
chr1	127895701	127900684	-	127895706	127900684	A3SS	0.5	50	50	ENSMUST00000086614.12	ENSMUSG00000036086.17	Zranb3	chr1	protein_coding	zinc finger, RAN-binding domain containing 3
chr1	127915136	127915734	-	127904281	127915734	A3SS	0.5	50	50	ENSMUST00000086614.12	ENSMUSG00000036086.17	Zranb3	chr1	protein_coding	zinc finger, RAN-binding domain containing 3
chr1	127892901	127893518	-	127892901	127895615	A5SS	0.5	50	50	ENSMUST00000086614.12	ENSMUSG00000036086.17	Zranb3	chr1	protein_coding	zinc finger, RAN-binding domain containing 3
chr1	127945466	127946349	-	127945466	127960586	A5SS	0.5	50	50	ENSMUST00000086614.12	ENSMUSG00000036086.17	Zranb3	chr1	protein_coding	zinc finger, RAN-binding domain containing 3
chr1	128019747	128029512	-	128019747	128029990	A5SS	0.33	50	50	ENSMUST00000086614.12	ENSMUSG00000036086.17	Zranb3	chr1	protein_coding	zinc finger, RAN-binding domain containing 3
chr1	128019747	128030705	-	128019747	128029512	A5SS	0.33	50	50	ENSMUST00000112538.4	ENSMUSG00000036086.17	Zranb3	chr1	protein_coding	zinc finger, RAN-binding domain containing 3
chr1	127892901	127895615	-	127892901;127894070	127893518;127895615	ES	0.5	50	50	ENSMUST00000143389.2	ENSMUSG00000036086.17	Zranb3	chr1	protein_coding	zinc finger, RAN-binding domain containing 3
chr1	127985737	128019580	-	127927197	128019580	A3SS	0.5	50	50	ENSMUST00000127393.8	ENSMUSG00000036086.17	Zranb3	chr1	protein_coding	zinc finger, RAN-binding domain containing 3
chr1	127927197	127943780	-	127927197	128019580	A5SS	0.5	50	50	ENSMUST00000127393.8	ENSMUSG00000036086.17	Zranb3	chr1	protein_coding	zinc finger, RAN-binding domain containing 3
chr1	128079689	128095630	+	128079689;128081136	128080926;128095630	ES	0.33	50	50	ENSMUST00000191016.7	ENSMUSG00000056211.14	R3hdm1	chr1	protein_coding	R3H domain containing 1
chr1	128081136;128090595	128090506;128095630	+	128081136	128095630	cassetteExon	0.5	100	100	ENSMUST00000191016.7	ENSMUSG00000056211.14	R3hdm1	chr1	protein_coding	R3H domain containing 1
chr1	128081136	128089939	+	128081136	128095630	A3SS	0.33	50	50	ENSMUST00000191016.7	ENSMUSG00000056211.14	R3hdm1	chr1	protein_coding	R3H domain containing 1
chr1	128069829	128079481	+	128031220	128079481	A5SS	0.5	50	50	ENSMUST00000191016.7	ENSMUSG00000056211.14	R3hdm1	chr1	protein_coding	R3H domain containing 1
chr1	128104693	128106620	+	128102969	128106620	A5SS	0.5	50	50	ENSMUST00000191016.7	ENSMUSG00000056211.14	R3hdm1	chr1	protein_coding	R3H domain containing 1
chr1	128081136	128090506	+	128081136;128089980	128089939;128090506	ES	0.5	50	50	ENSMUST00000187900.7	ENSMUSG00000056211.14	R3hdm1	chr1	protein_coding	R3H domain containing 1
chr1	128109949	128114495	+	128109949;128112391	128112137;128114495	ES	0.5	50	50	ENSMUST00000187900.7	ENSMUSG00000056211.14	R3hdm1	chr1	protein_coding	R3H domain containing 1
chr1	128114646	128121197	+	128114646;128118476	128118375;128121197	ES	0.5	50	50	ENSMUST00000036288.11	ENSMUSG00000056211.14	R3hdm1	chr1	protein_coding	R3H domain containing 1
chr1	128090595	128095630	+	128079689	128095630	A5SS	0.33	50	50	ENSMUST00000187023.7	ENSMUSG00000056211.14	R3hdm1	chr1	protein_coding	R3H domain containing 1
chr1	128079689	128095630	+	128079689	128080926	3pMXE	0.5	50	50	ENSMUST00000187557.2	ENSMUSG00000056211.14	R3hdm1	chr1	protein_coding	R3H domain containing 1
chr1	128109949	128114495	+	128112391	128114495	A5SS	0.5	50	50	ENSMUST00000185471.2	ENSMUSG00000056211.14	R3hdm1	chr1	protein_coding	R3H domain containing 1
chr1	128180042	128183170	+	128180042	128183892	A3SS	0.5	50	50	ENSMUST00000190736.7	ENSMUSG00000026353.10	Ubxn4	chr1	protein_coding	UBX domain protein 4
chr1	128172289	128179940	+	128171857	128179940	A5SS	0.5	50	50	ENSMUST00000190736.7	ENSMUSG00000026353.10	Ubxn4	chr1	protein_coding	UBX domain protein 4
chr1	128340131	128341397	-	128333205	128341397	A3SS	0.5	50	50	ENSMUST00000027602.15	ENSMUSG00000026356.16	Dars	chr1	protein_coding	aspartyl-tRNA synthetase
chr1	128517638	128519932	-	128517638	128519926	A5SS	0.5	50	50	ENSMUST00000052172.7	ENSMUSG00000045382.7	Cxcr4	chr1	protein_coding	chemokine (C-X-C motif) receptor 4
chr1	129358706	129540847	+	129358706;129523917	129523107;129540847	ES	0.5	50	50	ENSMUST00000073527.13	ENSMUSG00000042581.15	Thsd7b	chr1	protein_coding	thrombospondin, type I, domain containing 7B
chr1	129879305	129977508	+	129879305	130030808	A3SS	0.5	50	50	ENSMUST00000073527.13	ENSMUSG00000042581.15	Thsd7b	chr1	protein_coding	thrombospondin, type I, domain containing 7B
chr1	130108234	130109059	+	130108234	130116197	A3SS	0.5	50	50	ENSMUST00000073527.13	ENSMUSG00000042581.15	Thsd7b	chr1	protein_coding	thrombospondin, type I, domain containing 7B
chr1	129465501	129523107	+	129358706	129523107	A5SS	0.5	50	50	ENSMUST00000073527.13	ENSMUSG00000042581.15	Thsd7b	chr1	protein_coding	thrombospondin, type I, domain containing 7B
chr1	130091767	130092786	+	130090672	130092786	A5SS	0.5	50	50	ENSMUST00000073527.13	ENSMUSG00000042581.15	Thsd7b	chr1	protein_coding	thrombospondin, type I, domain containing 7B
chr1	129358706	129523107	+	129358706	129540847	A3SS	0.5	50	50	ENSMUST00000140629.2	ENSMUSG00000042581.15	Thsd7b	chr1	protein_coding	thrombospondin, type I, domain containing 7B
chr1	129523917	129540847	+	129358706	129540847	A5SS	0.5	50	50	ENSMUST00000140629.2	ENSMUSG00000042581.15	Thsd7b	chr1	protein_coding	thrombospondin, type I, domain containing 7B
chr1	130350037	130350128	-	130350037	130350602	A5SS	0.5	50	50	ENSMUST00000112488.9	ENSMUSG00000026401.16	Cd55b	chr1	protein_coding	CD55 molecule, decay accelerating factor for complement B
chr1	130341977	130344576	-	130338428	130344576	A3SS	0.5	50	50	ENSMUST00000119432.2	ENSMUSG00000026401.16	Cd55b	chr1	protein_coding	CD55 molecule, decay accelerating factor for complement B
chr1	130338428	130339130	-	130338428	130344576	A5SS	0.5	50	50	ENSMUST00000119432.2	ENSMUSG00000026401.16	Cd55b	chr1	protein_coding	CD55 molecule, decay accelerating factor for complement B
chr1	130389744	130389835	-	130389744	130390307	A5SS	0.5	50	50	ENSMUST00000027650.13	ENSMUSG00000026399.13	Cd55	chr1	protein_coding	CD55 molecule, decay accelerating factor for complement
chr1	130524578	130526897	-	130524578;130526738	130526544;130526897	ES	0.5	50	50	ENSMUST00000039862.11	ENSMUSG00000042554.11	Zp3r	chr1	protein_coding	zona pellucida 3 receptor
chr1	130547263	130557273	-	130547184	130557273	A3SS	0.5	50	50	ENSMUST00000039862.11	ENSMUSG00000042554.11	Zp3r	chr1	protein_coding	zona pellucida 3 receptor
chr1	130585051;130585216	130585200;130589185	-	130585051	130589185	cassetteExon	0.5	100	100	ENSMUST00000027657.14	ENSMUSG00000026405.15	C4bp	chr1	protein_coding	complement component 4 binding protein
chr1	130566970	130570710	-	130566970	130570671	A5SS	0.5	50	50	ENSMUST00000027657.14	ENSMUSG00000026405.15	C4bp	chr1	protein_coding	complement component 4 binding protein
chr1	130630175	130634163	-	130630175;130633238	130633114;130634163	ES	0.33	50	50	ENSMUST00000188520.2	ENSMUSG00000101904.2	Gm29427	chr1	protein_coding	predicted gene 29427
chr1	130642313	130644481	-	130642313	130643458	5pMXE	0.33	50	50	ENSMUST00000188520.2	ENSMUSG00000101904.2	Gm29427	chr1	protein_coding	predicted gene 29427
chr1	130642313	130646559	-	130642313	130643458	5pMXE	0.33	50	50	ENSMUST00000188520.2	ENSMUSG00000101904.2	Gm29427	chr1	protein_coding	predicted gene 29427
chr1	130626480;130627847	130627718;130628507	-	130626480	130628507	cassetteExon	0.5	100	100	ENSMUST00000188520.2	ENSMUSG00000101904.2	Gm29427	chr1	protein_coding	predicted gene 29427
chr1	130618885	130626416	-	130605647	130626416	A3SS	0.33	50	50	ENSMUST00000188520.2	ENSMUSG00000101904.2	Gm29427	chr1	protein_coding	predicted gene 29427
chr1	130625822	130626416	-	130605647	130626416	A3SS	0.33	50	50	ENSMUST00000188520.2	ENSMUSG00000101904.2	Gm29427	chr1	protein_coding	predicted gene 29427
chr1	130630156	130634163	-	130633238	130634163	A3SS&ES	0.33	50	50	ENSMUST00000188520.2	ENSMUSG00000101904.2	Gm29427	chr1	protein_coding	predicted gene 29427
chr1	130598810	130609886	-	130598810	130600321	A5SS&ES	0.5	50	50	ENSMUST00000188520.2	ENSMUSG00000101904.2	Gm29427	chr1	protein_coding	predicted gene 29427
chr1	130626480	130626925	-	130626480	130628507	A5SS	0.33	50	50	ENSMUST00000188520.2	ENSMUSG00000101904.2	Gm29427	chr1	protein_coding	predicted gene 29427
chr1	130635938	130642193	-	130635938	130642203	A5SS	0.5	50	50	ENSMUST00000188520.2	ENSMUSG00000101904.2	Gm29427	chr1	protein_coding	predicted gene 29427
chr1	130626480	130627718	-	130626480;130626987	130626925;130627718	ES	0.5	50	50	ENSMUST00000171479.8	ENSMUSG00000026409.15	Pfkfb2	chr1	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
chr1	130618885;130625822	130625643;130626416	-	130618885	130626416	cassetteExon	0.5	100	100	ENSMUST00000171479.8	ENSMUSG00000026409.15	Pfkfb2	chr1	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
chr1	130618885	130624754	-	130618885	130626416	A5SS	0.33	50	50	ENSMUST00000171479.8	ENSMUSG00000026409.15	Pfkfb2	chr1	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
chr1	130618885	130626416	-	130618885;130625822	130624754;130626416	ES	0.5	50	50	ENSMUST00000066863.13	ENSMUSG00000026409.15	Pfkfb2	chr1	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
chr1	130618885	130625643	-	130618885	130624754	A5SS	0.33	50	50	ENSMUST00000066863.13	ENSMUSG00000026409.15	Pfkfb2	chr1	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
chr1	130642313	130644481	-	130642313	130646559	A5SS	0.33	50	50	ENSMUST00000189534.7	ENSMUSG00000026409.15	Pfkfb2	chr1	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
chr1	130618885;130624822	130624754;130625643	-	130618885	130625643	cassetteExon	0.5	100	100	ENSMUST00000187089.7	ENSMUSG00000026409.15	Pfkfb2	chr1	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
chr1	130618885	130626416	-	130625822	130626416	3pMXE	0.33	50	50	ENSMUST00000169659.8	ENSMUSG00000026409.15	Pfkfb2	chr1	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
chr1	130630175	130634163	-	130630156	130634163	A3SS	0.33	50	50	ENSMUST00000186867.7	ENSMUSG00000026409.15	Pfkfb2	chr1	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
chr1	130659960	130668740	+	130659960;130665424	130665239;130668740	ES	0.5	50	50	ENSMUST00000039323.8	ENSMUSG00000042510.8	AA986860	chr1	protein_coding	expressed sequence AA986860
chr1	130728725	130730956	+	130728725	130730788	A3SS	0.5	50	50	ENSMUST00000112477.9	ENSMUSG00000026415.12	Fcamr	chr1	protein_coding	Fc receptor, IgA, IgM, high affinity
chr1	130738024	130744922	-	130738024	130744927	A5SS	0.5	50	50	ENSMUST00000125056.8	ENSMUSG00000086706.8	Gm15848	chr1	lncRNA	predicted gene 15848
chr1	130745159	130748309	-	130745159	130746196	A5SS&ES	0.5	50	50	ENSMUST00000125056.8	ENSMUSG00000086706.8	Gm15848	chr1	lncRNA	predicted gene 15848
chr1	130746426	130746582	-	130746426	130751765	A5SS	0.5	50	50	ENSMUST00000125056.8	ENSMUSG00000086706.8	Gm15848	chr1	lncRNA	predicted gene 15848
chr1	130745159;130746677	130746196;130748309	-	130745159	130748309	cassetteExon	0.5	100	100	ENSMUST00000122968.2	ENSMUSG00000086706.8	Gm15848	chr1	lncRNA	predicted gene 15848
chr1	130754718	130762110	+	130754544	130762110	A5SS	0.33	50	50	ENSMUST00000027675.14	ENSMUSG00000026417.14	Pigr	chr1	protein_coding	polymeric immunoglobulin receptor
chr1	130756828	130762110	+	130754544	130762110	A5SS	0.33	50	50	ENSMUST00000027675.14	ENSMUSG00000026417.14	Pigr	chr1	protein_coding	polymeric immunoglobulin receptor
chr1	130756828	130762110	+	130754718	130762110	A5SS	0.33	50	50	ENSMUST00000133792.8	ENSMUSG00000026417.14	Pigr	chr1	protein_coding	polymeric immunoglobulin receptor
chr1	130793633	130801901	+	130793633	130801785	A3SS	0.5	50	50	ENSMUST00000038829.7	ENSMUSG00000042474.7	Fcmr	chr1	protein_coding	Fc fragment of IgM receptor
chr1	130811700	130812525	-	130811729	130812525	A3SS	0.5	50	50	ENSMUST00000187650.7	ENSMUSG00000026420.17	Il24	chr1	protein_coding	interleukin 24
chr1	130813478	130814989	-	130813507	130814989	A3SS	0.5	50	50	ENSMUST00000121040.8	ENSMUSG00000026420.17	Il24	chr1	protein_coding	interleukin 24
chr1	130837464	130838805	-	130837464;130838536	130838471;130838805	ES	0.5	50	50	ENSMUST00000027673.11	ENSMUSG00000026416.13	Il20	chr1	protein_coding	interleukin 20
chr1	130867015	130867789	-	130867040	130867789	A3SS	0.33	50	50	ENSMUST00000187410.7	ENSMUSG00000016524.13	Il19	chr1	protein_coding	interleukin 19
chr1	130863782;130867015	130866654;130867789	-	130863782	130867789	cassetteExon	0.5	100	100	ENSMUST00000187916.7	ENSMUSG00000016524.13	Il19	chr1	protein_coding	interleukin 19
chr1	130863782;130867040	130866654;130867789	-	130863782	130867789	cassetteExon	0.5	100	100	ENSMUST00000187916.7	ENSMUSG00000016524.13	Il19	chr1	protein_coding	interleukin 19
chr1	130986499	131000077	-	130986499	131025026	A5SS	0.5	50	50	ENSMUST00000016672.11	ENSMUSG00000016528.11	Mapkapk2	chr1	protein_coding	MAP kinase-activated protein kinase 2
chr1	131064108	131065803	-	131064108	131065817	A5SS	0.5	50	50	ENSMUST00000016670.9	ENSMUSG00000016526.9	Dyrk3	chr1	protein_coding	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3
chr1	131082156;131082988	131082905;131083370	+	131082156	131083370	cassetteExon	0.5	100	100	ENSMUST00000139468.2	ENSMUSG00000026427.17	Eif2d	chr1	protein_coding	eukaryotic translation initiation factor 2D
chr1	131092243	131092857	+	131092243;131092506	131092357;131092857	ES	0.5	50	50	ENSMUST00000112446.9	ENSMUSG00000026427.17	Eif2d	chr1	protein_coding	eukaryotic translation initiation factor 2D
chr1	131098848	131101041	+	131098848	131099658	3pMXE	0.33	50	50	ENSMUST00000112446.9	ENSMUSG00000026427.17	Eif2d	chr1	protein_coding	eukaryotic translation initiation factor 2D
chr1	131098848	131110505	+	131098848	131099658	3pMXE	0.33	50	50	ENSMUST00000112446.9	ENSMUSG00000026427.17	Eif2d	chr1	protein_coding	eukaryotic translation initiation factor 2D
chr1	131086036	131088200	+	131086036	131088147	A3SS	0.5	50	50	ENSMUST00000112446.9	ENSMUSG00000026427.17	Eif2d	chr1	protein_coding	eukaryotic translation initiation factor 2D
chr1	131098848	131110505	+	131098848	131101041	3pMXE	0.33	50	50	ENSMUST00000068805.14	ENSMUSG00000026427.17	Eif2d	chr1	protein_coding	eukaryotic translation initiation factor 2D
chr1	131095977	131106337	+	131095977	131098674	A3SS&ES	0.5	50	50	ENSMUST00000151874.8	ENSMUSG00000026427.17	Eif2d	chr1	protein_coding	eukaryotic translation initiation factor 2D
chr1	131109991	131139994	-	131109991	131127590	5pMXE	0.5	50	50	ENSMUST00000068564.15	ENSMUSG00000026430.17	Rassf5	chr1	protein_coding	Ras association (RalGDS/AF-6) domain family member 5
chr1	131108405	131108988	-	131108405	131108891	A5SS	0.5	50	50	ENSMUST00000068564.15	ENSMUSG00000026430.17	Rassf5	chr1	protein_coding	Ras association (RalGDS/AF-6) domain family member 5
chr1	131135461	131139994	-	131109991	131139994	A3SS	0.5	50	50	ENSMUST00000027688.15	ENSMUSG00000026430.17	Rassf5	chr1	protein_coding	Ras association (RalGDS/AF-6) domain family member 5
chr1	131140115	131161155	-	131140115	131172426	A5SS	0.5	50	50	ENSMUST00000027688.15	ENSMUSG00000026430.17	Rassf5	chr1	protein_coding	Ras association (RalGDS/AF-6) domain family member 5
chr1	131203016	131203516	-	131203016	131203444	A5SS	0.5	50	50	ENSMUST00000062108.10	ENSMUSG00000042349.14	Ikbke	chr1	protein_coding	inhibitor of kappaB kinase epsilon
chr1	131204315	131204631	-	131204315	131206436	A5SS	0.5	50	50	ENSMUST00000062108.10	ENSMUSG00000042349.14	Ikbke	chr1	protein_coding	inhibitor of kappaB kinase epsilon
chr1	131217478;131219428	131219334;131220259	-	131217478	131220259	cassetteExon	0.5	100	100	ENSMUST00000097588.9	ENSMUSG00000026425.16	Srgap2	chr1	protein_coding	SLIT-ROBO Rho GTPase activating protein 2
chr1	131223277	131224058	-	131220583	131224058	A3SS	0.33	50	50	ENSMUST00000097588.9	ENSMUSG00000026425.16	Srgap2	chr1	protein_coding	SLIT-ROBO Rho GTPase activating protein 2
chr1	131223645	131224058	-	131220583	131224058	A3SS	0.33	50	50	ENSMUST00000097588.9	ENSMUSG00000026425.16	Srgap2	chr1	protein_coding	SLIT-ROBO Rho GTPase activating protein 2
chr1	131224937	131226070	-	131224204	131226070	A3SS	0.5	50	50	ENSMUST00000097588.9	ENSMUSG00000026425.16	Srgap2	chr1	protein_coding	SLIT-ROBO Rho GTPase activating protein 2
chr1	131238436	131238714	-	131238436	131244867	A5SS	0.5	50	50	ENSMUST00000097588.9	ENSMUSG00000026425.16	Srgap2	chr1	protein_coding	SLIT-ROBO Rho GTPase activating protein 2
chr1	131259879	131260719	-	131259879	131261595	A5SS	0.5	50	50	ENSMUST00000097588.9	ENSMUSG00000026425.16	Srgap2	chr1	protein_coding	SLIT-ROBO Rho GTPase activating protein 2
chr1	131364605	131431903	-	131364605	131452676	A5SS	0.33	50	50	ENSMUST00000097588.9	ENSMUSG00000026425.16	Srgap2	chr1	protein_coding	SLIT-ROBO Rho GTPase activating protein 2
chr1	131364605	131441909	-	131364605	131452676	A5SS	0.33	50	50	ENSMUST00000097588.9	ENSMUSG00000026425.16	Srgap2	chr1	protein_coding	SLIT-ROBO Rho GTPase activating protein 2
chr1	131223645	131224058	-	131223277	131224058	A3SS	0.33	50	50	ENSMUST00000190336.7	ENSMUSG00000026425.16	Srgap2	chr1	protein_coding	SLIT-ROBO Rho GTPase activating protein 2
chr1	131364605	131431903	-	131364605	131441909	A5SS	0.33	50	50	ENSMUST00000185445.3	ENSMUSG00000026425.16	Srgap2	chr1	protein_coding	SLIT-ROBO Rho GTPase activating protein 2
chr1	131527739	131537149	+	131528409	131537149	A5SS	0.5	50	50	ENSMUST00000027690.7	ENSMUSG00000026432.8	Avpr1b	chr1	protein_coding	arginine vasopressin receptor 1B
chr1	131600083	131602519	+	131600083;131600281	131600183;131602519	ES	0.5	50	50	ENSMUST00000073350.13	ENSMUSG00000004552.17	Ctse	chr1	protein_coding	cathepsin E
chr1	131625693	131633334	+	131625693;131626369	131626154;131633334	ES	0.5	50	50	ENSMUST00000064679.9	ENSMUSG00000052688.13	Rab7b	chr1	protein_coding	RAB7B, member RAS oncogene family
chr1	131626369	131639358	+	131626369;131633459	131633334;131639358	ES	0.25	50	50	ENSMUST00000064679.9	ENSMUSG00000052688.13	Rab7b	chr1	protein_coding	RAB7B, member RAS oncogene family
chr1	131633459;131638449	131638416;131639358	+	131633459	131639358	cassetteExon	0.5	100	100	ENSMUST00000064679.9	ENSMUSG00000052688.13	Rab7b	chr1	protein_coding	RAB7B, member RAS oncogene family
chr1	131624467	131624737	+	131616573	131624737	A5SS	0.5	50	50	ENSMUST00000064679.9	ENSMUSG00000052688.13	Rab7b	chr1	protein_coding	RAB7B, member RAS oncogene family
chr1	131625693	131639358	+	131625693;131626369	131626154;131639358	ES	0.25	50	50	ENSMUST00000064664.10	ENSMUSG00000052688.13	Rab7b	chr1	protein_coding	RAB7B, member RAS oncogene family
chr1	131625693;131633459	131633334;131639358	+	131625693;131626369	131626154;131639358	MXE	0.5	100	100	ENSMUST00000064664.10	ENSMUSG00000052688.13	Rab7b	chr1	protein_coding	RAB7B, member RAS oncogene family
chr1	131638449	131639358	+	131626369	131639358	A5SS	0.25	50	50	ENSMUST00000064664.10	ENSMUSG00000052688.13	Rab7b	chr1	protein_coding	RAB7B, member RAS oncogene family
chr1	131625693;131626369	131626154;131639358	+	131625693;131638449	131633334;131639358	MXE	0.5	100	100	ENSMUST00000136247.8	ENSMUSG00000052688.13	Rab7b	chr1	protein_coding	RAB7B, member RAS oncogene family
chr1	131625693;131633459	131633334;131639358	+	131625693	131639358	cassetteExon	0.5	100	100	ENSMUST00000129905.2	ENSMUSG00000052688.13	Rab7b	chr1	protein_coding	RAB7B, member RAS oncogene family
chr1	131638449	131639358	+	131625693	131639358	A5SS	0.25	50	50	ENSMUST00000129905.2	ENSMUSG00000052688.13	Rab7b	chr1	protein_coding	RAB7B, member RAS oncogene family
chr1	131626369	131639358	+	131626369	131633334	3pMXE	0.5	50	50	ENSMUST00000130848.2	ENSMUSG00000052688.13	Rab7b	chr1	protein_coding	RAB7B, member RAS oncogene family
chr1	131680721	131681565	+	131680721;131680968	131680858;131681565	ES	0.5	50	50	ENSMUST00000049027.10	ENSMUSG00000042268.11	Slc26a9	chr1	protein_coding	solute carrier family 26, member 9
chr1	131687231	131689485	+	131687231	131689444	A3SS	0.5	50	50	ENSMUST00000049027.10	ENSMUSG00000042268.11	Slc26a9	chr1	protein_coding	solute carrier family 26, member 9
chr1	131678153	131678318	+	131671851	131678318	A5SS	0.5	50	50	ENSMUST00000049027.10	ENSMUSG00000042268.11	Slc26a9	chr1	protein_coding	solute carrier family 26, member 9
chr1	131739941	131740028	+	131739941	131741629	A3SS	0.5	50	50	ENSMUST00000112393.9	ENSMUSG00000042251.13	Pm20d1	chr1	protein_coding	peptidase M20 domain containing 1
chr1	131743849	131743993	+	131743849	131748440	A3SS	0.5	50	50	ENSMUST00000048660.12	ENSMUSG00000042251.13	Pm20d1	chr1	protein_coding	peptidase M20 domain containing 1
chr1	131756131	131757749	+	131755336	131757749	A5SS	0.5	50	50	ENSMUST00000132585.2	ENSMUSG00000013275.10	Slc41a1	chr1	protein_coding	solute carrier family 41, member 1
chr1	131795513	131797688	+	131795513	131797671	A3SS	0.5	50	50	ENSMUST00000112386.8	ENSMUSG00000026433.14	Rab29	chr1	protein_coding	RAB29, member RAS oncogene family
chr1	131855954	131857351	+	131855954	131857354	A3SS	0.5	50	50	ENSMUST00000189946.7	ENSMUSG00000026434.13	Nucks1	chr1	protein_coding	nuclear casein kinase and cyclin-dependent kinase substrate 1
chr1	131904850	131905151	+	131904850	131942121	A3SS	0.33	50	50	ENSMUST00000191034.2	ENSMUSG00000100037.2	Gm29103	chr1	lncRNA	predicted gene 29103
chr1	131904850	131905193	+	131904850	131942121	A3SS	0.33	50	50	ENSMUST00000191034.2	ENSMUSG00000100037.2	Gm29103	chr1	lncRNA	predicted gene 29103
chr1	131898565	131904456	+	131890790	131904456	A5SS	0.5	50	50	ENSMUST00000191034.2	ENSMUSG00000100037.2	Gm29103	chr1	lncRNA	predicted gene 29103
chr1	131935678	131942121	+	131904850	131942121	A5SS	0.2	50	50	ENSMUST00000191034.2	ENSMUSG00000100037.2	Gm29103	chr1	lncRNA	predicted gene 29103
chr1	131935925	131942121	+	131904850	131942121	A5SS	0.2	50	50	ENSMUST00000191034.2	ENSMUSG00000100037.2	Gm29103	chr1	lncRNA	predicted gene 29103
chr1	131936661	131942121	+	131904850	131942121	A5SS	0.2	50	50	ENSMUST00000191034.2	ENSMUSG00000100037.2	Gm29103	chr1	lncRNA	predicted gene 29103
chr1	131940972	131942121	+	131904850	131942121	A5SS	0.2	50	50	ENSMUST00000191034.2	ENSMUSG00000100037.2	Gm29103	chr1	lncRNA	predicted gene 29103
chr1	131904850	131905193	+	131904850	131905151	A3SS	0.5	50	50	ENSMUST00000177943.8	ENSMUSG00000026435.16	Slc45a3	chr1	protein_coding	solute carrier family 45, member 3
chr1	131906883	131909029	+	131906751	131909029	A5SS	0.5	50	50	ENSMUST00000177943.8	ENSMUSG00000026435.16	Slc45a3	chr1	protein_coding	solute carrier family 45, member 3
chr1	131947204	131959302	+	131947204	131951291	3pMXE	0.5	50	50	ENSMUST00000086556.12	ENSMUSG00000026436.16	Elk4	chr1	protein_coding	ELK4, member of ETS oncogene family
chr1	131935678;131940972	131940764;131942121	+	131935678	131942121	cassetteExon	0.5	100	100	ENSMUST00000086556.12	ENSMUSG00000026436.16	Elk4	chr1	protein_coding	ELK4, member of ETS oncogene family
chr1	131935925	131942121	+	131935678	131942121	A5SS	0.2	50	50	ENSMUST00000086556.12	ENSMUSG00000026436.16	Elk4	chr1	protein_coding	ELK4, member of ETS oncogene family
chr1	131936661	131942121	+	131935678	131942121	A5SS	0.2	50	50	ENSMUST00000086556.12	ENSMUSG00000026436.16	Elk4	chr1	protein_coding	ELK4, member of ETS oncogene family
chr1	131935925	131940764	+	131935678	131940764	A5SS	0.5	50	50	ENSMUST00000027696.10	ENSMUSG00000026436.16	Elk4	chr1	protein_coding	ELK4, member of ETS oncogene family
chr1	131935925	131942121	+	131940972	131942121	A5SS&ES	0.25	50	50	ENSMUST00000027696.10	ENSMUSG00000026436.16	Elk4	chr1	protein_coding	ELK4, member of ETS oncogene family
chr1	131936661	131942121	+	131940972	131942121	A5SS&ES	0.25	50	50	ENSMUST00000027696.10	ENSMUSG00000026436.16	Elk4	chr1	protein_coding	ELK4, member of ETS oncogene family
chr1	131935925;131940972	131940764;131942121	+	131935925	131942121	cassetteExon	0.5	100	100	ENSMUST00000146188.2	ENSMUSG00000026436.16	Elk4	chr1	protein_coding	ELK4, member of ETS oncogene family
chr1	131936661	131942121	+	131935925	131942121	A5SS	0.2	50	50	ENSMUST00000146188.2	ENSMUSG00000026436.16	Elk4	chr1	protein_coding	ELK4, member of ETS oncogene family
chr1	131947204	131959302	+	131947204;131951576	131951291;131959302	ES	0.5	50	50	ENSMUST00000147218.2	ENSMUSG00000026436.16	Elk4	chr1	protein_coding	ELK4, member of ETS oncogene family
chr1	131968398	131974044	-	131968398;131969666	131969596;131974044	ES	0.5	50	50	ENSMUST00000126927.8	ENSMUSG00000059149.18	Mfsd4a	chr1	protein_coding	major facilitator superfamily domain containing 4A
chr1	131980291	131981797	-	131980291;131981402	131981287;131981797	ES	0.5	50	50	ENSMUST00000126927.8	ENSMUSG00000059149.18	Mfsd4a	chr1	protein_coding	major facilitator superfamily domain containing 4A
chr1	131981962	131986898	-	131981962;131985705	131985454;131986898	ES	0.5	50	50	ENSMUST00000126927.8	ENSMUSG00000059149.18	Mfsd4a	chr1	protein_coding	major facilitator superfamily domain containing 4A
chr1	131985705	131995401	-	131985705;131987096	131986898;131995401	ES	0.5	50	50	ENSMUST00000126927.8	ENSMUSG00000059149.18	Mfsd4a	chr1	protein_coding	major facilitator superfamily domain containing 4A
chr1	131951219	131956191	-	131951374	131956191	A3SS	0.33	50	50	ENSMUST00000126927.8	ENSMUSG00000059149.18	Mfsd4a	chr1	protein_coding	major facilitator superfamily domain containing 4A
chr1	131955278	131956191	-	131951374	131956191	A3SS	0.33	50	50	ENSMUST00000126927.8	ENSMUSG00000059149.18	Mfsd4a	chr1	protein_coding	major facilitator superfamily domain containing 4A
chr1	131966711	131968278	-	131956285	131968278	A3SS	0.5	50	50	ENSMUST00000126927.8	ENSMUSG00000059149.18	Mfsd4a	chr1	protein_coding	major facilitator superfamily domain containing 4A
chr1	131968300	131969596	-	131968398	131969596	A3SS	0.5	50	50	ENSMUST00000126927.8	ENSMUSG00000059149.18	Mfsd4a	chr1	protein_coding	major facilitator superfamily domain containing 4A
chr1	131955278	131956191	-	131951219	131956191	A3SS	0.33	50	50	ENSMUST00000163016.2	ENSMUSG00000059149.18	Mfsd4a	chr1	protein_coding	major facilitator superfamily domain containing 4A
chr1	131974191;131985705	131985454;131986898	-	131974191;131981962	131980118;131986898	MXE	0.5	100	100	ENSMUST00000160656.8	ENSMUSG00000059149.18	Mfsd4a	chr1	protein_coding	major facilitator superfamily domain containing 4A
chr1	131974191;131985705	131985454;131995401	-	131974191;131987096	131980118;131995401	MXE	0.5	100	100	ENSMUST00000160656.8	ENSMUSG00000059149.18	Mfsd4a	chr1	protein_coding	major facilitator superfamily domain containing 4A
chr1	131981962;131985705	131985454;131995401	-	131981962;131987096	131986898;131995401	MXE	0.5	100	100	ENSMUST00000160656.8	ENSMUSG00000059149.18	Mfsd4a	chr1	protein_coding	major facilitator superfamily domain containing 4A
chr1	131981962	131985454	-	131974191	131985454	A3SS	0.5	50	50	ENSMUST00000046658.10	ENSMUSG00000059149.18	Mfsd4a	chr1	protein_coding	major facilitator superfamily domain containing 4A
chr1	131981962	131986898	-	131985705	131986898	A3SS&ES	0.5	50	50	ENSMUST00000046658.10	ENSMUSG00000059149.18	Mfsd4a	chr1	protein_coding	major facilitator superfamily domain containing 4A
chr1	131974191	131980118	-	131974191	131985454	A5SS	0.5	50	50	ENSMUST00000046658.10	ENSMUSG00000059149.18	Mfsd4a	chr1	protein_coding	major facilitator superfamily domain containing 4A
chr1	132043690	132044334	-	132043690;132044227	132044185;132044334	ES	0.5	50	50	ENSMUST00000027697.12	ENSMUSG00000026437.12	Cdk18	chr1	protein_coding	cyclin-dependent kinase 18
chr1	132043690	132044334	-	132043690	132044185	A5SS	0.5	50	50	ENSMUST00000188387.7	ENSMUSG00000026437.12	Cdk18	chr1	protein_coding	cyclin-dependent kinase 18
chr1	132156774	132184435	+	132156774;132160075	132160005;132184435	ES	0.33	50	50	ENSMUST00000188169.7	ENSMUSG00000079330.10	Lemd1	chr1	protein_coding	LEM domain containing 1
chr1	132156774;132183232	132183093;132184435	+	132156774;132160075	132160005;132184435	MXE	0.5	100	100	ENSMUST00000188169.7	ENSMUSG00000079330.10	Lemd1	chr1	protein_coding	LEM domain containing 1
chr1	132156774;132183232	132183159;132184435	+	132156774;132160075	132160005;132184435	MXE	0.5	100	100	ENSMUST00000188169.7	ENSMUSG00000079330.10	Lemd1	chr1	protein_coding	LEM domain containing 1
chr1	132160075;132183232	132183159;132184435	+	132160075	132184435	cassetteExon	0.5	100	100	ENSMUST00000188169.7	ENSMUSG00000079330.10	Lemd1	chr1	protein_coding	LEM domain containing 1
chr1	132119227	132132047	+	132119227	132155922	A3SS	0.5	50	50	ENSMUST00000188169.7	ENSMUSG00000079330.10	Lemd1	chr1	protein_coding	LEM domain containing 1
chr1	132154109	132155922	+	132119227	132155922	A5SS	0.5	50	50	ENSMUST00000188169.7	ENSMUSG00000079330.10	Lemd1	chr1	protein_coding	LEM domain containing 1
chr1	132156774;132183232	132183093;132184435	+	132156774	132184435	cassetteExon	0.5	100	100	ENSMUST00000112357.9	ENSMUSG00000079330.10	Lemd1	chr1	protein_coding	LEM domain containing 1
chr1	132156774;132183232	132183159;132184435	+	132156774	132184435	cassetteExon	0.5	100	100	ENSMUST00000112357.9	ENSMUSG00000079330.10	Lemd1	chr1	protein_coding	LEM domain containing 1
chr1	132119227	132132047	+	132128810	132132047	5pMXE	0.33	50	50	ENSMUST00000189062.2	ENSMUSG00000079330.10	Lemd1	chr1	protein_coding	LEM domain containing 1
chr1	132131846	132132047	+	132128810	132132047	A5SS	0.33	50	50	ENSMUST00000189062.2	ENSMUSG00000079330.10	Lemd1	chr1	protein_coding	LEM domain containing 1
chr1	132119227	132132047	+	132131846	132132047	5pMXE	0.33	50	50	ENSMUST00000185223.2	ENSMUSG00000079330.10	Lemd1	chr1	protein_coding	LEM domain containing 1
chr1	132156774	132183159	+	132156774	132183093	A3SS	0.25	50	50	ENSMUST00000185436.7	ENSMUSG00000079330.10	Lemd1	chr1	protein_coding	LEM domain containing 1
chr1	132156774;132160075	132160005;132183159	+	132156774	132183159	cassetteExon	0.5	100	100	ENSMUST00000187339.7	ENSMUSG00000079330.10	Lemd1	chr1	protein_coding	LEM domain containing 1
chr1	132156774	132183093	+	132156774	132160005	A3SS&ES	0.25	50	50	ENSMUST00000191418.2	ENSMUSG00000079330.10	Lemd1	chr1	protein_coding	LEM domain containing 1
chr1	132252811	132255435	+	132252811;132253967	132253944;132255435	ES	0.5	50	50	ENSMUST00000072177.14	ENSMUSG00000009772.16	Nuak2	chr1	protein_coding	NUAK family, SNF1-like kinase, 2
chr1	132244210	132245160	+	132244210	132252691	A3SS	0.5	50	50	ENSMUST00000072177.14	ENSMUSG00000009772.16	Nuak2	chr1	protein_coding	NUAK family, SNF1-like kinase, 2
chr1	132288953	132292440	-	132288953	132308395	A5SS	0.25	50	50	ENSMUST00000045473.16	ENSMUSG00000042066.17	Tmcc2	chr1	protein_coding	transmembrane and coiled-coil domains 2
chr1	132288953	132294619	-	132288953	132308395	A5SS	0.25	50	50	ENSMUST00000045473.16	ENSMUSG00000042066.17	Tmcc2	chr1	protein_coding	transmembrane and coiled-coil domains 2
chr1	132288953	132295436	-	132288953	132308395	A5SS	0.25	50	50	ENSMUST00000045473.16	ENSMUSG00000042066.17	Tmcc2	chr1	protein_coding	transmembrane and coiled-coil domains 2
chr1	132308919	132317640	-	132308919	132318715	A5SS	0.5	50	50	ENSMUST00000045473.16	ENSMUSG00000042066.17	Tmcc2	chr1	protein_coding	transmembrane and coiled-coil domains 2
chr1	132288953	132295436	-	132288953	132294619	5pMXE	0.25	50	50	ENSMUST00000136828.3	ENSMUSG00000042066.17	Tmcc2	chr1	protein_coding	transmembrane and coiled-coil domains 2
chr1	132288953	132292440	-	132288953	132294619	A5SS	0.25	50	50	ENSMUST00000136828.3	ENSMUSG00000042066.17	Tmcc2	chr1	protein_coding	transmembrane and coiled-coil domains 2
chr1	132288953	132292440	-	132288953	132295436	A5SS	0.25	50	50	ENSMUST00000138717.2	ENSMUSG00000042066.17	Tmcc2	chr1	protein_coding	transmembrane and coiled-coil domains 2
chr1	132387728	132391062	+	132387728;132390785	132390651;132391062	ES	0.5	50	50	ENSMUST00000045110.14	ENSMUSG00000042046.16	Dstyk	chr1	protein_coding	dual serine/threonine and tyrosine protein kinase
chr1	132377713	132379279	+	132377713	132380825	A3SS	0.5	50	50	ENSMUST00000045110.14	ENSMUSG00000042046.16	Dstyk	chr1	protein_coding	dual serine/threonine and tyrosine protein kinase
chr1	132357314	132361837	+	132345608	132361837	A5SS	0.5	50	50	ENSMUST00000045110.14	ENSMUSG00000042046.16	Dstyk	chr1	protein_coding	dual serine/threonine and tyrosine protein kinase
chr1	132387728	132391062	+	132390785	132391062	5pMXE	0.5	50	50	ENSMUST00000191494.2	ENSMUSG00000042046.16	Dstyk	chr1	protein_coding	dual serine/threonine and tyrosine protein kinase
chr1	132411815	132412540	+	132411815	132412484	A3SS	0.5	50	50	ENSMUST00000190825.7	ENSMUSG00000026439.15	Rbbp5	chr1	protein_coding	retinoblastoma binding protein 5, histone lysine methyltransferase complex subunit
chr1	132425859	132431502	+	132425859	132431505	A3SS	0.5	50	50	ENSMUST00000190825.7	ENSMUSG00000026439.15	Rbbp5	chr1	protein_coding	retinoblastoma binding protein 5, histone lysine methyltransferase complex subunit
chr1	132405592	132411790	+	132405265	132411790	A5SS	0.5	50	50	ENSMUST00000190825.7	ENSMUSG00000026439.15	Rbbp5	chr1	protein_coding	retinoblastoma binding protein 5, histone lysine methyltransferase complex subunit
chr1	132412539	132417326	+	132412656	132417326	A5SS	0.33	50	50	ENSMUST00000190825.7	ENSMUSG00000026439.15	Rbbp5	chr1	protein_coding	retinoblastoma binding protein 5, histone lysine methyltransferase complex subunit
chr1	132413243	132417326	+	132412656	132417326	A5SS	0.33	50	50	ENSMUST00000190825.7	ENSMUSG00000026439.15	Rbbp5	chr1	protein_coding	retinoblastoma binding protein 5, histone lysine methyltransferase complex subunit
chr1	132425745	132431502	+	132425859	132431502	A5SS	0.5	50	50	ENSMUST00000190997.7	ENSMUSG00000026439.15	Rbbp5	chr1	protein_coding	retinoblastoma binding protein 5, histone lysine methyltransferase complex subunit
chr1	132412539	132417326	+	132412539;132413243	132413186;132417326	ES	0.33	50	50	ENSMUST00000027700.15	ENSMUSG00000026439.15	Rbbp5	chr1	protein_coding	retinoblastoma binding protein 5, histone lysine methyltransferase complex subunit
chr1	132438531	132441986	-	132438531;132439131	132439053;132441986	ES	0.5	50	50	ENSMUST00000189528.7	ENSMUSG00000053024.15	Cntn2	chr1	protein_coding	contactin 2
chr1	132446575	132446907	-	132446634	132446907	A3SS	0.5	50	50	ENSMUST00000188065.7	ENSMUSG00000053024.15	Cntn2	chr1	protein_coding	contactin 2
chr1	132461555	132470767	-	132461555	132470461	5pMXE	0.5	50	50	ENSMUST00000186487.7	ENSMUSG00000053024.15	Cntn2	chr1	protein_coding	contactin 2
chr1	132533323	132536121	-	132533323;132534785	132534741;132536121	ES	0.5	50	50	ENSMUST00000094569.11	ENSMUSG00000026442.15	Nfasc	chr1	protein_coding	neurofascin
chr1	132564829	132570416	-	132564829;132565619	132565602;132570416	ES	0.5	50	50	ENSMUST00000094569.11	ENSMUSG00000026442.15	Nfasc	chr1	protein_coding	neurofascin
chr1	132570596	132669409	-	132570596;132593325	132593217;132669409	ES	0.5	50	50	ENSMUST00000094569.11	ENSMUSG00000026442.15	Nfasc	chr1	protein_coding	neurofascin
chr1	132549361;132555660	132555610;132559423	-	132549361	132559423	cassetteExon	0.5	100	100	ENSMUST00000094569.11	ENSMUSG00000026442.15	Nfasc	chr1	protein_coding	neurofascin
chr1	132527952	132529709	-	132524386	132529709	A3SS	0.5	50	50	ENSMUST00000094569.11	ENSMUSG00000026442.15	Nfasc	chr1	protein_coding	neurofascin
chr1	132592702	132593217	-	132570596	132593217	A3SS	0.5	50	50	ENSMUST00000094569.11	ENSMUSG00000026442.15	Nfasc	chr1	protein_coding	neurofascin
chr1	132504155	132514801	-	132504155	132510733	A5SS&ES	0.33	50	50	ENSMUST00000094569.11	ENSMUSG00000026442.15	Nfasc	chr1	protein_coding	neurofascin
chr1	132524386	132525503	-	132524386	132529709	A5SS	0.5	50	50	ENSMUST00000094569.11	ENSMUSG00000026442.15	Nfasc	chr1	protein_coding	neurofascin
chr1	132547258	132548676	-	132547258	132548663	A5SS	0.5	50	50	ENSMUST00000094569.11	ENSMUSG00000026442.15	Nfasc	chr1	protein_coding	neurofascin
chr1	132593325	132634837	-	132593325	132669409	A5SS	0.5	50	50	ENSMUST00000094569.11	ENSMUSG00000026442.15	Nfasc	chr1	protein_coding	neurofascin
chr1	132516048	132521089	-	132504155	132521089	A3SS	0.5	50	50	ENSMUST00000043189.14	ENSMUSG00000026442.15	Nfasc	chr1	protein_coding	neurofascin
chr1	132504155	132510733	-	132504155	132521089	A5SS	0.33	50	50	ENSMUST00000043189.14	ENSMUSG00000026442.15	Nfasc	chr1	protein_coding	neurofascin
chr1	132504155	132514801	-	132504155	132521089	A5SS	0.33	50	50	ENSMUST00000043189.14	ENSMUSG00000026442.15	Nfasc	chr1	protein_coding	neurofascin
chr1	132808580	132864719	+	132808413	132864719	A5SS	0.5	50	50	ENSMUST00000027706.4	ENSMUSG00000026443.4	Lrrn2	chr1	protein_coding	leucine rich repeat protein 2, neuronal
chr1	132924447	132931529	-	132924447;132929181	132929021;132931529	ES	0.5	50	50	ENSMUST00000186617.7	ENSMUSG00000054387.14	Mdm4	chr1	protein_coding	transformed mouse 3T3 cell double minute 4
chr1	132931628	132936875	-	132931628;132932459	132932392;132936875	ES	0.33	50	50	ENSMUST00000186617.7	ENSMUSG00000054387.14	Mdm4	chr1	protein_coding	transformed mouse 3T3 cell double minute 4
chr1	132946622;132947169	132947092;132952986	-	132946622	132952986	cassetteExon	0.5	100	100	ENSMUST00000186617.7	ENSMUSG00000054387.14	Mdm4	chr1	protein_coding	transformed mouse 3T3 cell double minute 4
chr1	132919963	132922241	-	132890894	132922241	A3SS	0.5	50	50	ENSMUST00000186617.7	ENSMUSG00000054387.14	Mdm4	chr1	protein_coding	transformed mouse 3T3 cell double minute 4
chr1	132932430	132936875	-	132932459	132936875	A3SS	0.33	50	50	ENSMUST00000186617.7	ENSMUSG00000054387.14	Mdm4	chr1	protein_coding	transformed mouse 3T3 cell double minute 4
chr1	132940452	132946515	-	132940449	132946515	A3SS	0.5	50	50	ENSMUST00000186617.7	ENSMUSG00000054387.14	Mdm4	chr1	protein_coding	transformed mouse 3T3 cell double minute 4
chr1	132947169	132958273	-	132947169	132952986	5pMXE	0.5	50	50	ENSMUST00000067429.10	ENSMUSG00000054387.14	Mdm4	chr1	protein_coding	transformed mouse 3T3 cell double minute 4
chr1	132931628;132932430	132932392;132936875	-	132931628	132936875	cassetteExon	0.5	100	100	ENSMUST00000191212.7	ENSMUSG00000054387.14	Mdm4	chr1	protein_coding	transformed mouse 3T3 cell double minute 4
chr1	132924447	132931529	-	132929181	132931529	3pMXE	0.5	50	50	ENSMUST00000187529.2	ENSMUSG00000054387.14	Mdm4	chr1	protein_coding	transformed mouse 3T3 cell double minute 4
chr1	132946622	132952986	-	132946622	132947092	A5SS&ES	0.5	50	50	ENSMUST00000190807.2	ENSMUSG00000054387.14	Mdm4	chr1	protein_coding	transformed mouse 3T3 cell double minute 4
chr1	132974161	132993950	+	132973655	132993950	A5SS	0.5	50	50	ENSMUST00000153707.8	ENSMUSG00000026447.18	Pik3c2b	chr1	protein_coding	phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta
chr1	132996671	132998056	+	132994967	132998056	A5SS	0.5	50	50	ENSMUST00000124934.8	ENSMUSG00000026447.18	Pik3c2b	chr1	protein_coding	phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta
chr1	133059648	133064401	+	133061353	133064401	A5SS	0.5	50	50	ENSMUST00000052529.4	ENSMUSG00000046062.6	Ppp1r15b	chr1	protein_coding	protein phosphatase 1, regulatory subunit 15B
chr1	133194404	133197738	+	133194404	133197798	A3SS	0.5	50	50	ENSMUST00000212252.2	ENSMUSG00000041757.18	Plekha6	chr1	protein_coding	pleckstrin homology domain containing, family A member 6
chr1	133109338	133186747	+	133101544	133186747	A5SS	0.25	50	50	ENSMUST00000212252.2	ENSMUSG00000041757.18	Plekha6	chr1	protein_coding	pleckstrin homology domain containing, family A member 6
chr1	133173880	133186747	+	133101544	133186747	A5SS	0.25	50	50	ENSMUST00000212252.2	ENSMUSG00000041757.18	Plekha6	chr1	protein_coding	pleckstrin homology domain containing, family A member 6
chr1	133184776	133186747	+	133101544	133186747	A5SS	0.25	50	50	ENSMUST00000212252.2	ENSMUSG00000041757.18	Plekha6	chr1	protein_coding	pleckstrin homology domain containing, family A member 6
chr1	133202112	133209521	+	133202112;133208145	133208077;133209521	ES	0.5	50	50	ENSMUST00000187285.7	ENSMUSG00000041757.18	Plekha6	chr1	protein_coding	pleckstrin homology domain containing, family A member 6
chr1	133202112;133202617	133202531;133208077	+	133202112	133208077	cassetteExon	0.5	100	100	ENSMUST00000187285.7	ENSMUSG00000041757.18	Plekha6	chr1	protein_coding	pleckstrin homology domain containing, family A member 6
chr1	133213124;133214134	133213985;133215208	+	133213124	133215208	cassetteExon	0.5	100	100	ENSMUST00000187285.7	ENSMUSG00000041757.18	Plekha6	chr1	protein_coding	pleckstrin homology domain containing, family A member 6
chr1	133215618	133220090	+	133215618	133220093	A3SS	0.5	50	50	ENSMUST00000187285.7	ENSMUSG00000041757.18	Plekha6	chr1	protein_coding	pleckstrin homology domain containing, family A member 6
chr1	133173880	133186747	+	133109338	133186747	A5SS	0.25	50	50	ENSMUST00000187285.7	ENSMUSG00000041757.18	Plekha6	chr1	protein_coding	pleckstrin homology domain containing, family A member 6
chr1	133184776	133186747	+	133109338	133186747	A5SS	0.25	50	50	ENSMUST00000187285.7	ENSMUSG00000041757.18	Plekha6	chr1	protein_coding	pleckstrin homology domain containing, family A member 6
chr1	133203603	133208077	+	133202112	133208077	A5SS	0.25	50	50	ENSMUST00000187285.7	ENSMUSG00000041757.18	Plekha6	chr1	protein_coding	pleckstrin homology domain containing, family A member 6
chr1	133207191	133208077	+	133202112	133208077	A5SS	0.25	50	50	ENSMUST00000187285.7	ENSMUSG00000041757.18	Plekha6	chr1	protein_coding	pleckstrin homology domain containing, family A member 6
chr1	133184776	133186747	+	133173880	133186747	A5SS	0.25	50	50	ENSMUST00000105082.9	ENSMUSG00000041757.18	Plekha6	chr1	protein_coding	pleckstrin homology domain containing, family A member 6
chr1	133197316	133197738	+	133194404	133197738	A5SS	0.5	50	50	ENSMUST00000105082.9	ENSMUSG00000041757.18	Plekha6	chr1	protein_coding	pleckstrin homology domain containing, family A member 6
chr1	133203603	133208077	+	133203603;133207191	133207111;133208077	ES	0.25	50	50	ENSMUST00000038295.15	ENSMUSG00000041757.18	Plekha6	chr1	protein_coding	pleckstrin homology domain containing, family A member 6
chr1	133202617;133203603	133203550;133208077	+	133202617	133208077	cassetteExon	0.5	100	100	ENSMUST00000190186.7	ENSMUSG00000041757.18	Plekha6	chr1	protein_coding	pleckstrin homology domain containing, family A member 6
chr1	133207191	133208077	+	133202617	133208077	A5SS	0.25	50	50	ENSMUST00000190186.7	ENSMUSG00000041757.18	Plekha6	chr1	protein_coding	pleckstrin homology domain containing, family A member 6
chr1	133202112	133202531	+	133202112	133209521	A3SS	0.33	50	50	ENSMUST00000189598.2	ENSMUSG00000041757.18	Plekha6	chr1	protein_coding	pleckstrin homology domain containing, family A member 6
chr1	133182385	133183846	-	133179154	133183846	A3SS	0.5	50	50	ENSMUST00000191207.2	ENSMUSG00000101693.2	Gm19461	chr1	lncRNA	predicted gene, 19461
chr1	133179154	133184621	-	133179154	133183846	A5SS	0.5	50	50	ENSMUST00000191207.2	ENSMUSG00000101693.2	Gm19461	chr1	lncRNA	predicted gene, 19461
chr1	133248792	133254948	+	133248792	133249347	3pMXE	0.5	50	50	ENSMUST00000094557.7	ENSMUSG00000103421.2	Golt1a	chr1	protein_coding	golgi transport 1A
chr1	133237703	133247019	+	133237649	133247019	A5SS	0.5	50	50	ENSMUST00000094557.7	ENSMUSG00000103421.2	Golt1a	chr1	protein_coding	golgi transport 1A
chr1	133237649	133247019	+	133237649	133254873	A3SS	0.33	50	50	ENSMUST00000193888.6	ENSMUSG00000115958.2	Gm28040	chr1	protein_coding	predicted gene, 28040
chr1	133237649	133254948	+	133237649	133254873	A3SS	0.33	50	50	ENSMUST00000193888.6	ENSMUSG00000115958.2	Gm28040	chr1	protein_coding	predicted gene, 28040
chr1	133251786	133254873	+	133237649	133254873	A5SS	0.5	50	50	ENSMUST00000193888.6	ENSMUSG00000115958.2	Gm28040	chr1	protein_coding	predicted gene, 28040
chr1	133237649	133247019	+	133237649	133254948	A3SS	0.33	50	50	ENSMUST00000194044.6	ENSMUSG00000115958.2	Gm28040	chr1	protein_coding	predicted gene, 28040
chr1	133248792	133254948	+	133237649	133254948	A5SS	0.33	50	50	ENSMUST00000194044.6	ENSMUSG00000115958.2	Gm28040	chr1	protein_coding	predicted gene, 28040
chr1	133249714	133254948	+	133237649	133254948	A5SS	0.33	50	50	ENSMUST00000194044.6	ENSMUSG00000115958.2	Gm28040	chr1	protein_coding	predicted gene, 28040
chr1	133248792;133249714	133249347;133254948	+	133248792	133254948	cassetteExon	0.5	100	100	ENSMUST00000184603.8	ENSMUSG00000098306.10	Gm28040	chr1	protein_coding	predicted gene, 28040
chr1	133248792	133254948	+	133249714	133254948	5pMXE	0.33	50	50	ENSMUST00000007433.5	ENSMUSG00000116158.2	Kiss1	chr1	protein_coding	KiSS-1 metastasis-suppressor
chr1	133279711	133281865	+	133278535	133281865	A5SS	0.5	50	50	ENSMUST00000094556.3	ENSMUSG00000070645.6	Ren1	chr1	protein_coding	renin 1 structural
chr1	133295098	133296488	+	133293573	133296488	A5SS	0.5	50	50	ENSMUST00000135222.9	ENSMUSG00000070644.14	Etnk2	chr1	protein_coding	ethanolamine kinase 2
chr1	133316301	133316667	-	133316298	133316667	A3SS	0.5	50	50	ENSMUST00000144386.8	ENSMUSG00000070643.12	Sox13	chr1	protein_coding	SRY (sex determining region Y)-box 13
chr1	133311662	133312195	-	133311662	133312151	A5SS	0.5	50	50	ENSMUST00000144386.8	ENSMUSG00000070643.12	Sox13	chr1	protein_coding	SRY (sex determining region Y)-box 13
chr1	133531814	133536635	-	133531814;133534317	133534239;133536635	ES	0.5	50	50	ENSMUST00000166915.8	ENSMUSG00000090553.9	Snrpe	chr1	protein_coding	small nuclear ribonucleoprotein E
chr1	133534317	133537646	-	133534317	133536635	A5SS&ES	0.5	50	50	ENSMUST00000166915.8	ENSMUSG00000090553.9	Snrpe	chr1	protein_coding	small nuclear ribonucleoprotein E
chr1	133531814	133536635	-	133534317	133536635	3pMXE	0.5	50	50	ENSMUST00000164096.2	ENSMUSG00000090553.9	Snrpe	chr1	protein_coding	small nuclear ribonucleoprotein E
chr1	133581770	133588975	-	133581770;133583136	133583083;133588975	ES	0.25	50	50	ENSMUST00000191896.6	ENSMUSG00000102976.7	Zc3h11a	chr1	protein_coding	zinc finger CCCH type containing 11A
chr1	133575267;133579563	133579516;133581711	-	133575267	133581711	cassetteExon	0.5	100	100	ENSMUST00000191896.6	ENSMUSG00000102976.7	Zc3h11a	chr1	protein_coding	zinc finger CCCH type containing 11A
chr1	133582176	133583083	-	133581770	133583083	A3SS	0.5	50	50	ENSMUST00000191896.6	ENSMUSG00000102976.7	Zc3h11a	chr1	protein_coding	zinc finger CCCH type containing 11A
chr1	133582176	133588975	-	133583136	133588975	A3SS&ES	0.25	50	50	ENSMUST00000191896.6	ENSMUSG00000102976.7	Zc3h11a	chr1	protein_coding	zinc finger CCCH type containing 11A
chr1	133553668	133554722	-	133553668	133554505	A5SS	0.5	50	50	ENSMUST00000191896.6	ENSMUSG00000102976.7	Zc3h11a	chr1	protein_coding	zinc finger CCCH type containing 11A
chr1	133581770	133588994	-	133581770	133583083	A5SS&ES	0.33	50	50	ENSMUST00000191896.6	ENSMUSG00000102976.7	Zc3h11a	chr1	protein_coding	zinc finger CCCH type containing 11A
chr1	133583136	133585127	-	133583136	133588975	A5SS	0.25	50	50	ENSMUST00000191896.6	ENSMUSG00000102976.7	Zc3h11a	chr1	protein_coding	zinc finger CCCH type containing 11A
chr1	133583136	133588314	-	133583136	133588975	A5SS	0.25	50	50	ENSMUST00000191896.6	ENSMUSG00000102976.7	Zc3h11a	chr1	protein_coding	zinc finger CCCH type containing 11A
chr1	133583136	133588994	-	133583136	133588975	A5SS	0.25	50	50	ENSMUST00000191896.6	ENSMUSG00000102976.7	Zc3h11a	chr1	protein_coding	zinc finger CCCH type containing 11A
chr1	133563794	133565087	-	133555008	133565087	A3SS	0.5	50	50	ENSMUST00000195669.2	ENSMUSG00000102976.7	Zc3h11a	chr1	protein_coding	zinc finger CCCH type containing 11A
chr1	133555008	133561500	-	133555008	133565087	A5SS	0.5	50	50	ENSMUST00000195669.2	ENSMUSG00000102976.7	Zc3h11a	chr1	protein_coding	zinc finger CCCH type containing 11A
chr1	133583136	133588994	-	133583136;133585154	133585127;133588994	ES	0.25	50	50	ENSMUST00000195424.6	ENSMUSG00000102976.7	Zc3h11a	chr1	protein_coding	zinc finger CCCH type containing 11A
chr1	133583136;133588359	133588314;133588994	-	133583136;133585154	133585127;133588994	MXE	0.5	100	100	ENSMUST00000195424.6	ENSMUSG00000102976.7	Zc3h11a	chr1	protein_coding	zinc finger CCCH type containing 11A
chr1	133575267	133588975	-	133575267	133581711	A5SS&ES	0.33	50	50	ENSMUST00000195424.6	ENSMUSG00000102976.7	Zc3h11a	chr1	protein_coding	zinc finger CCCH type containing 11A
chr1	133581770	133588975	-	133581770	133583083	A5SS&ES	0.33	50	50	ENSMUST00000195424.6	ENSMUSG00000102976.7	Zc3h11a	chr1	protein_coding	zinc finger CCCH type containing 11A
chr1	133575267;133581770	133581711;133588975	-	133575267	133588975	cassetteExon	0.5	100	100	ENSMUST00000194668.6	ENSMUSG00000102976.7	Zc3h11a	chr1	protein_coding	zinc finger CCCH type containing 11A
chr1	133575267;133582176	133581711;133588975	-	133575267	133588975	cassetteExon	0.5	100	100	ENSMUST00000194668.6	ENSMUSG00000102976.7	Zc3h11a	chr1	protein_coding	zinc finger CCCH type containing 11A
chr1	133583136	133588975	-	133575267	133588975	A3SS	0.25	50	50	ENSMUST00000194668.6	ENSMUSG00000102976.7	Zc3h11a	chr1	protein_coding	zinc finger CCCH type containing 11A
chr1	133575267	133579516	-	133575267	133588975	A5SS	0.33	50	50	ENSMUST00000194668.6	ENSMUSG00000102976.7	Zc3h11a	chr1	protein_coding	zinc finger CCCH type containing 11A
chr1	133581770	133588994	-	133581770;133583136	133583083;133588994	ES	0.25	50	50	ENSMUST00000192107.6	ENSMUSG00000102976.7	Zc3h11a	chr1	protein_coding	zinc finger CCCH type containing 11A
chr1	133583136;133588359	133588314;133588994	-	133583136	133588994	cassetteExon	0.5	100	100	ENSMUST00000192107.6	ENSMUSG00000102976.7	Zc3h11a	chr1	protein_coding	zinc finger CCCH type containing 11A
chr1	133585154	133588994	-	133581770	133588994	A3SS	0.25	50	50	ENSMUST00000193504.6	ENSMUSG00000102976.7	Zc3h11a	chr1	protein_coding	zinc finger CCCH type containing 11A
chr1	133588359	133588994	-	133581770	133588994	A3SS	0.25	50	50	ENSMUST00000193504.6	ENSMUSG00000102976.7	Zc3h11a	chr1	protein_coding	zinc finger CCCH type containing 11A
chr1	133581770	133588975	-	133581770	133588994	A5SS	0.33	50	50	ENSMUST00000193504.6	ENSMUSG00000102976.7	Zc3h11a	chr1	protein_coding	zinc finger CCCH type containing 11A
chr1	133582176;133583136	133583083;133588975	-	133582176	133588975	cassetteExon	0.5	100	100	ENSMUST00000195067.2	ENSMUSG00000102976.7	Zc3h11a	chr1	protein_coding	zinc finger CCCH type containing 11A
chr1	133581770	133588975	-	133582176	133588975	A3SS	0.25	50	50	ENSMUST00000195067.2	ENSMUSG00000102976.7	Zc3h11a	chr1	protein_coding	zinc finger CCCH type containing 11A
chr1	133582176	133588975	-	133582176	133583083	A5SS&ES	0.5	50	50	ENSMUST00000191932.2	ENSMUSG00000102976.7	Zc3h11a	chr1	protein_coding	zinc finger CCCH type containing 11A
chr1	133581770	133588975	-	133583136	133588975	3pMXE	0.25	50	50	ENSMUST00000192775.2	ENSMUSG00000102976.7	Zc3h11a	chr1	protein_coding	zinc finger CCCH type containing 11A
chr1	133611847	133616559	-	133608373	133616559	A3SS	0.5	50	50	ENSMUST00000189524.2	ENSMUSG00000051998.15	Lax1	chr1	protein_coding	lymphocyte transmembrane adaptor 1
chr1	133608373	133610721	-	133608373	133616559	A5SS	0.5	50	50	ENSMUST00000189524.2	ENSMUSG00000051998.15	Lax1	chr1	protein_coding	lymphocyte transmembrane adaptor 1
chr1	133634734;133639560	133639370;133642792	-	133634734	133642792	cassetteExon	0.5	100	100	ENSMUST00000143567.8	ENSMUSG00000026463.18	Atp2b4	chr1	protein_coding	ATPase, Ca++ transporting, plasma membrane 4
chr1	133634734;133639560	133639380;133642792	-	133634734	133642792	cassetteExon	0.5	100	100	ENSMUST00000143567.8	ENSMUSG00000026463.18	Atp2b4	chr1	protein_coding	ATPase, Ca++ transporting, plasma membrane 4
chr1	133681487;133712743	133712606;133728375	-	133681487	133728375	cassetteExon	0.5	100	100	ENSMUST00000143567.8	ENSMUSG00000026463.18	Atp2b4	chr1	protein_coding	ATPase, Ca++ transporting, plasma membrane 4
chr1	133641730	133642792	-	133634734	133642792	A3SS	0.33	50	50	ENSMUST00000143567.8	ENSMUSG00000026463.18	Atp2b4	chr1	protein_coding	ATPase, Ca++ transporting, plasma membrane 4
chr1	133641730	133642792	-	133639560	133642792	A3SS	0.33	50	50	ENSMUST00000048953.14	ENSMUSG00000026463.18	Atp2b4	chr1	protein_coding	ATPase, Ca++ transporting, plasma membrane 4
chr1	133634734	133639380	-	133634734	133639370	A5SS	0.33	50	50	ENSMUST00000048953.14	ENSMUSG00000026463.18	Atp2b4	chr1	protein_coding	ATPase, Ca++ transporting, plasma membrane 4
chr1	133828928	133831388	-	133828928;133829891	133829733;133831388	ES	0.5	50	50	ENSMUST00000124051.9	ENSMUSG00000010311.16	Optc	chr1	protein_coding	opticin
chr1	133842786	133848993	-	133843159	133848993	A3SS	0.5	50	50	ENSMUST00000048432.6	ENSMUSG00000041577.6	Prelp	chr1	protein_coding	proline arginine-rich end leucine-rich repeat
chr1	133965320	133967768	+	133965320	133967954	A3SS	0.5	50	50	ENSMUST00000048183.8	ENSMUSG00000041559.8	Fmod	chr1	protein_coding	fibromodulin
chr1	134077221	134078950	+	134077221	134078217	A3SS&ES	0.5	50	50	ENSMUST00000159963.8	ENSMUSG00000026450.15	Chit1	chr1	protein_coding	chitinase 1 (chitotriosidase)
chr1	134110547	134110976	+	134110547	134111235	A3SS	0.33	50	50	ENSMUST00000156873.8	ENSMUSG00000064246.11	Chil1	chr1	protein_coding	chitinase-like 1
chr1	134110547	134111222	+	134110547	134111235	A3SS	0.33	50	50	ENSMUST00000156873.8	ENSMUSG00000064246.11	Chil1	chr1	protein_coding	chitinase-like 1
chr1	134110290	134110518	+	134110013	134110518	A5SS	0.5	50	50	ENSMUST00000156873.8	ENSMUSG00000064246.11	Chil1	chr1	protein_coding	chitinase-like 1
chr1	134110547	134111222	+	134110547	134110976	A3SS	0.33	50	50	ENSMUST00000133701.8	ENSMUSG00000064246.11	Chil1	chr1	protein_coding	chitinase-like 1
chr1	134162184	134162966	-	134162150	134162966	A3SS	0.5	50	50	ENSMUST00000086465.6	ENSMUSG00000042429.9	Adora1	chr1	protein_coding	adenosine A1 receptor
chr1	134226566	134227029	-	134226566;134226874	134226764;134227029	ES	0.5	50	50	ENSMUST00000168515.8	ENSMUSG00000026458.14	Ppfia4	chr1	protein_coding	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4
chr1	134237489	134239795	-	134237489;134239293	134239267;134239795	ES	0.5	50	50	ENSMUST00000168515.8	ENSMUSG00000026458.14	Ppfia4	chr1	protein_coding	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4
chr1	134232122	134232306	-	134232122	134237314	A5SS	0.5	50	50	ENSMUST00000168515.8	ENSMUSG00000026458.14	Ppfia4	chr1	protein_coding	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4
chr1	134237489	134239795	-	134237489	134239267	5pMXE	0.5	50	50	ENSMUST00000186553.2	ENSMUSG00000026458.14	Ppfia4	chr1	protein_coding	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4
chr1	134280173;134280875	134280713;134282399	-	134280173	134282399	cassetteExon	0.5	100	100	ENSMUST00000049470.11	ENSMUSG00000042305.13	Tmem183a	chr1	protein_coding	transmembrane protein 183A
chr1	134334200	134334784	+	134334200;134334409	134334337;134334784	ES	0.33	50	50	ENSMUST00000186489.7	ENSMUSG00000026456.19	Cyb5r1	chr1	protein_coding	cytochrome b5 reductase 1
chr1	134335441	134336142	+	134335441	134335555	3pMXE	0.5	50	50	ENSMUST00000186489.7	ENSMUSG00000026456.19	Cyb5r1	chr1	protein_coding	cytochrome b5 reductase 1
chr1	134334409;134334704	134334599;134334784	+	134334409	134334784	cassetteExon	0.5	100	100	ENSMUST00000186489.7	ENSMUSG00000026456.19	Cyb5r1	chr1	protein_coding	cytochrome b5 reductase 1
chr1	134333791	134334051	+	134333537	134334051	A5SS	0.5	50	50	ENSMUST00000186489.7	ENSMUSG00000026456.19	Cyb5r1	chr1	protein_coding	cytochrome b5 reductase 1
chr1	134333791	134334019	+	134333791	134334051	A3SS	0.25	50	50	ENSMUST00000154237.8	ENSMUSG00000026456.19	Cyb5r1	chr1	protein_coding	cytochrome b5 reductase 1
chr1	134333791	134334131	+	134333791	134334051	A3SS	0.25	50	50	ENSMUST00000154237.8	ENSMUSG00000026456.19	Cyb5r1	chr1	protein_coding	cytochrome b5 reductase 1
chr1	134333791	134334147	+	134333791	134334051	A3SS	0.25	50	50	ENSMUST00000154237.8	ENSMUSG00000026456.19	Cyb5r1	chr1	protein_coding	cytochrome b5 reductase 1
chr1	134333791	134334019	+	134333791	134334131	A3SS	0.25	50	50	ENSMUST00000174315.8	ENSMUSG00000026456.19	Cyb5r1	chr1	protein_coding	cytochrome b5 reductase 1
chr1	134333791	134334147	+	134333791	134334131	A3SS	0.25	50	50	ENSMUST00000174315.8	ENSMUSG00000026456.19	Cyb5r1	chr1	protein_coding	cytochrome b5 reductase 1
chr1	134333791	134334147	+	134333791	134334019	A3SS	0.25	50	50	ENSMUST00000130836.8	ENSMUSG00000026456.19	Cyb5r1	chr1	protein_coding	cytochrome b5 reductase 1
chr1	134334200;134334704	134334337;134334784	+	134334200	134334784	cassetteExon	0.5	100	100	ENSMUST00000172795.2	ENSMUSG00000026456.19	Cyb5r1	chr1	protein_coding	cytochrome b5 reductase 1
chr1	134343323;134343727	134343431;134350659	+	134343323	134350659	cassetteExon	0.5	100	100	ENSMUST00000027727.15	ENSMUSG00000026457.15	Adipor1	chr1	protein_coding	adiponectin receptor 1
chr1	134343323	134350659	+	134343727	134350659	A5SS	0.5	50	50	ENSMUST00000112237.2	ENSMUSG00000026457.15	Adipor1	chr1	protein_coding	adiponectin receptor 1
chr1	134343323	134350659	+	134343323	134343431	3pMXE	0.5	50	50	ENSMUST00000156433.2	ENSMUSG00000026457.15	Adipor1	chr1	protein_coding	adiponectin receptor 1
chr1	134383403	134386204	+	134383403	134386166	A3SS	0.5	50	50	ENSMUST00000133721.8	ENSMUSG00000026455.15	Klhl12	chr1	protein_coding	kelch-like 12
chr1	134415480	134416673	+	134415480	134416754	A3SS	0.5	50	50	ENSMUST00000112232.8	ENSMUSG00000026455.15	Klhl12	chr1	protein_coding	kelch-like 12
chr1	134469903;134474460	134474364;134474622	-	134469903	134474622	cassetteExon	0.5	100	100	ENSMUST00000172898.2	ENSMUSG00000046367.11	Mgat4e	chr1	protein_coding	MGAT4 family, member E
chr1	134516685	134521076	+	134516685	134521067	A3SS	0.5	50	50	ENSMUST00000047714.14	ENSMUSG00000042207.18	Kdm5b	chr1	protein_coding	lysine (K)-specific demethylase 5B
chr1	134574573;134591736	134591528;134668573	+	134574573	134668573	cassetteExon	0.5	100	100	ENSMUST00000187725.7	ENSMUSG00000026452.16	Syt2	chr1	protein_coding	synaptotagmin II
chr1	134637162	134668573	+	134574573	134668573	A5SS	0.33	50	50	ENSMUST00000187725.7	ENSMUSG00000026452.16	Syt2	chr1	protein_coding	synaptotagmin II
chr1	134637162	134668573	+	134591736	134668573	A5SS	0.33	50	50	ENSMUST00000188842.7	ENSMUSG00000026452.16	Syt2	chr1	protein_coding	synaptotagmin II
chr1	134688233;134693815	134693635;134699736	-	134688233	134699736	cassetteExon	0.5	100	100	ENSMUST00000045665.13	ENSMUSG00000073557.13	Ppp1r12b	chr1	protein_coding	protein phosphatase 1, regulatory subunit 12B
chr1	134761999	134762173	-	134709905	134762173	A3SS	0.5	50	50	ENSMUST00000045665.13	ENSMUSG00000073557.13	Ppp1r12b	chr1	protein_coding	protein phosphatase 1, regulatory subunit 12B
chr1	134800048	134800545	-	134793698	134800545	A3SS	0.5	50	50	ENSMUST00000045665.13	ENSMUSG00000073557.13	Ppp1r12b	chr1	protein_coding	protein phosphatase 1, regulatory subunit 12B
chr1	134876775	134883230	-	134830246	134883230	A3SS	0.5	50	50	ENSMUST00000045665.13	ENSMUSG00000073557.13	Ppp1r12b	chr1	protein_coding	protein phosphatase 1, regulatory subunit 12B
chr1	134709905	134730840	-	134709905	134762173	A5SS	0.5	50	50	ENSMUST00000045665.13	ENSMUSG00000073557.13	Ppp1r12b	chr1	protein_coding	protein phosphatase 1, regulatory subunit 12B
chr1	134770471	134774095	-	134770471	134793516	A5SS	0.5	50	50	ENSMUST00000045665.13	ENSMUSG00000073557.13	Ppp1r12b	chr1	protein_coding	protein phosphatase 1, regulatory subunit 12B
chr1	134793698	134797806	-	134793698	134800545	A5SS	0.5	50	50	ENSMUST00000045665.13	ENSMUSG00000073557.13	Ppp1r12b	chr1	protein_coding	protein phosphatase 1, regulatory subunit 12B
chr1	134688233	134699736	-	134693815	134699736	3pMXE	0.5	50	50	ENSMUST00000086444.6	ENSMUSG00000073557.13	Ppp1r12b	chr1	protein_coding	protein phosphatase 1, regulatory subunit 12B
chr1	134895640	134896979	+	134895636	134896979	A5SS	0.5	50	50	ENSMUST00000027687.8	ENSMUSG00000026429.10	Ube2t	chr1	protein_coding	ubiquitin-conjugating enzyme E2T
chr1	134899093;134899927	134899639;134901538	+	134899093	134901538	cassetteExon	0.5	100	100	ENSMUST00000188177.2	ENSMUSG00000026429.10	Ube2t	chr1	protein_coding	ubiquitin-conjugating enzyme E2T
chr1	134933497	134945467	-	134933497	134949513	A5SS	0.5	50	50	ENSMUST00000044828.14	ENSMUSG00000042793.14	Lgr6	chr1	protein_coding	leucine-rich repeat-containing G protein-coupled receptor 6
chr1	134949584	134949705	-	134949584	134954790	A5SS	0.5	50	50	ENSMUST00000044828.14	ENSMUSG00000042793.14	Lgr6	chr1	protein_coding	leucine-rich repeat-containing G protein-coupled receptor 6
chr1	135036803	135037301	-	135037187	135037301	A3SS&ES	0.5	50	50	ENSMUST00000183317.8	ENSMUSG00000097993.8	Ptprv	chr1	polymorphic_pseudogene	protein tyrosine phosphatase, receptor type, V
chr1	135057042	135060258	-	135057488	135060258	A3SS	0.5	50	50	ENSMUST00000183317.8	ENSMUSG00000097993.8	Ptprv	chr1	polymorphic_pseudogene	protein tyrosine phosphatase, receptor type, V
chr1	135036792	135036933	-	135036792	135037024	A5SS	0.5	50	50	ENSMUST00000183317.8	ENSMUSG00000097993.8	Ptprv	chr1	polymorphic_pseudogene	protein tyrosine phosphatase, receptor type, V
chr1	135057488	135058807	-	135057488	135060258	A5SS	0.33	50	50	ENSMUST00000183317.8	ENSMUSG00000097993.8	Ptprv	chr1	polymorphic_pseudogene	protein tyrosine phosphatase, receptor type, V
chr1	135057488	135060090	-	135057488	135060258	A5SS	0.33	50	50	ENSMUST00000183317.8	ENSMUSG00000097993.8	Ptprv	chr1	polymorphic_pseudogene	protein tyrosine phosphatase, receptor type, V
chr1	135056459	135056855	-	135054820	135056855	A3SS	0.5	50	50	ENSMUST00000182541.8	ENSMUSG00000097993.8	Ptprv	chr1	polymorphic_pseudogene	protein tyrosine phosphatase, receptor type, V
chr1	135054820	135055775	-	135054820	135056855	A5SS	0.5	50	50	ENSMUST00000182541.8	ENSMUSG00000097993.8	Ptprv	chr1	polymorphic_pseudogene	protein tyrosine phosphatase, receptor type, V
chr1	135057488	135060090	-	135057488	135058807	5pMXE	0.33	50	50	ENSMUST00000183328.2	ENSMUSG00000097993.8	Ptprv	chr1	polymorphic_pseudogene	protein tyrosine phosphatase, receptor type, V
chr1	135060528	135061488	+	135060515	135061488	A5SS	0.33	50	50	ENSMUST00000187985.7	ENSMUSG00000031506.12	Ptpn7	chr1	protein_coding	protein tyrosine phosphatase, non-receptor type 7
chr1	135061193	135061488	+	135060515	135061488	A5SS	0.33	50	50	ENSMUST00000187985.7	ENSMUSG00000031506.12	Ptpn7	chr1	protein_coding	protein tyrosine phosphatase, non-receptor type 7
chr1	135061193	135061488	+	135060528	135061488	A5SS	0.33	50	50	ENSMUST00000049449.11	ENSMUSG00000031506.12	Ptpn7	chr1	protein_coding	protein tyrosine phosphatase, non-receptor type 7
chr1	135075465	135080209	+	135074838	135080209	A5SS	0.5	50	50	ENSMUST00000027684.11	ENSMUSG00000026426.11	Arl8a	chr1	protein_coding	ADP-ribosylation factor-like 8A
chr1	135184964	135185353	-	135185024	135185353	A3SS	0.5	50	50	ENSMUST00000003135.14	ENSMUSG00000003051.14	Elf3	chr1	protein_coding	E74-like factor 3
chr1	135199502	135205127	-	135199502;135200216	135200100;135205127	ES	0.5	50	50	ENSMUST00000077340.14	ENSMUSG00000041926.16	Rnpep	chr1	protein_coding	arginyl aminopeptidase (aminopeptidase B)
chr1	135195933	135199267	-	135195934	135199267	A3SS	0.5	50	50	ENSMUST00000077340.14	ENSMUSG00000041926.16	Rnpep	chr1	protein_coding	arginyl aminopeptidase (aminopeptidase B)
chr1	135200216	135202204	-	135200216	135205127	A5SS	0.5	50	50	ENSMUST00000077340.14	ENSMUSG00000041926.16	Rnpep	chr1	protein_coding	arginyl aminopeptidase (aminopeptidase B)
chr1	135199502	135205127	-	135199502	135200100	5pMXE	0.5	50	50	ENSMUST00000141092.2	ENSMUSG00000041926.16	Rnpep	chr1	protein_coding	arginyl aminopeptidase (aminopeptidase B)
chr1	135236936	135237505	-	135236936	135237509	A5SS	0.5	50	50	ENSMUST00000081104.10	ENSMUSG00000062580.10	Timm17a	chr1	protein_coding	translocase of inner mitochondrial membrane 17a
chr1	135237608	135238612	-	135237608	135241432	A5SS	0.33	50	50	ENSMUST00000081104.10	ENSMUSG00000062580.10	Timm17a	chr1	protein_coding	translocase of inner mitochondrial membrane 17a
chr1	135237608	135241293	-	135237608	135241432	A5SS	0.33	50	50	ENSMUST00000081104.10	ENSMUSG00000062580.10	Timm17a	chr1	protein_coding	translocase of inner mitochondrial membrane 17a
chr1	135237608	135238612	-	135237608	135241293	A5SS	0.33	50	50	ENSMUST00000134088.3	ENSMUSG00000062580.10	Timm17a	chr1	protein_coding	translocase of inner mitochondrial membrane 17a
chr1	135313215	135313957	-	135313215;135313741	135313665;135313957	ES	0.5	50	50	ENSMUST00000041023.14	ENSMUSG00000041879.14	Ipo9	chr1	protein_coding	importin 9
chr1	135319382;135319673	135319493;135321874	-	135319382	135321874	cassetteExon	0.5	100	100	ENSMUST00000041023.14	ENSMUSG00000041879.14	Ipo9	chr1	protein_coding	importin 9
chr1	135348091;135354779	135354669;135358006	-	135348091	135358006	cassetteExon	0.5	100	100	ENSMUST00000041023.14	ENSMUSG00000041879.14	Ipo9	chr1	protein_coding	importin 9
chr1	135317556	135329971	-	135327941	135329971	A3SS&ES	0.5	50	50	ENSMUST00000041023.14	ENSMUSG00000041879.14	Ipo9	chr1	protein_coding	importin 9
chr1	135348091	135353662	-	135348091	135358006	A5SS	0.33	50	50	ENSMUST00000041023.14	ENSMUSG00000041879.14	Ipo9	chr1	protein_coding	importin 9
chr1	135348091;135353724	135353662;135354669	-	135348091	135354669	cassetteExon	0.5	100	100	ENSMUST00000161189.8	ENSMUSG00000041879.14	Ipo9	chr1	protein_coding	importin 9
chr1	135334587	135354669	-	135348091	135354669	A3SS&ES	0.33	50	50	ENSMUST00000161189.8	ENSMUSG00000041879.14	Ipo9	chr1	protein_coding	importin 9
chr1	135348091	135358006	-	135354779	135358006	A3SS&ES	0.5	50	50	ENSMUST00000161838.8	ENSMUSG00000041879.14	Ipo9	chr1	protein_coding	importin 9
chr1	135353724	135354669	-	135334587	135354669	A3SS	0.33	50	50	ENSMUST00000161838.8	ENSMUSG00000041879.14	Ipo9	chr1	protein_coding	importin 9
chr1	135391537	135392444	-	135391537;135391676	135391653;135392444	ES	0.5	50	50	ENSMUST00000040599.15	ENSMUSG00000009418.17	Nav1	chr1	protein_coding	neuron navigator 1
chr1	135392496	135395379	-	135392496;135393747	135393577;135395379	ES	0.5	50	50	ENSMUST00000040599.15	ENSMUSG00000009418.17	Nav1	chr1	protein_coding	neuron navigator 1
chr1	135383068	135385599	-	135383068	135386128	A5SS	0.33	50	50	ENSMUST00000040599.15	ENSMUSG00000009418.17	Nav1	chr1	protein_coding	neuron navigator 1
chr1	135383068	135386394	-	135383068	135386128	A5SS&ES	0.33	50	50	ENSMUST00000040599.15	ENSMUSG00000009418.17	Nav1	chr1	protein_coding	neuron navigator 1
chr1	135400609	135437942	-	135400609	135460087	A5SS	0.5	50	50	ENSMUST00000040599.15	ENSMUSG00000009418.17	Nav1	chr1	protein_coding	neuron navigator 1
chr1	135383068	135386394	-	135383068;135385607	135385599;135386394	ES	0.5	50	50	ENSMUST00000067414.13	ENSMUSG00000009418.17	Nav1	chr1	protein_coding	neuron navigator 1
chr1	135657012	135667138	+	135647931	135667138	A5SS	0.5	50	50	ENSMUST00000097561.9	ENSMUSG00000026421.15	Csrp1	chr1	protein_coding	cysteine and glycine-rich protein 1
chr1	135694995	135696216	+	135694632	135696216	A5SS	0.5	50	50	ENSMUST00000038945.6	ENSMUSG00000041801.6	Phlda3	chr1	protein_coding	pleckstrin homology like domain, family A, member 3
chr1	135711168	135727711	+	135711168	135712443	3pMXE	0.5	50	50	ENSMUST00000187830.7	ENSMUSG00000026418.17	Tnni1	chr1	protein_coding	troponin I, skeletal, slow 1
chr1	135727758	135733288	+	135727758	135730332	A3SS&ES	0.5	50	50	ENSMUST00000132795.8	ENSMUSG00000026418.17	Tnni1	chr1	protein_coding	troponin I, skeletal, slow 1
chr1	135731023	135732793	+	135731023	135732791	A3SS	0.5	50	50	ENSMUST00000132795.8	ENSMUSG00000026418.17	Tnni1	chr1	protein_coding	troponin I, skeletal, slow 1
chr1	135727234	135727711	+	135711168	135727711	A5SS	0.33	50	50	ENSMUST00000132795.8	ENSMUSG00000026418.17	Tnni1	chr1	protein_coding	troponin I, skeletal, slow 1
chr1	135727234	135730332	+	135727758	135730332	A5SS&ES	0.5	50	50	ENSMUST00000132795.8	ENSMUSG00000026418.17	Tnni1	chr1	protein_coding	troponin I, skeletal, slow 1
chr1	135727276	135727711	+	135711168	135727711	A5SS	0.33	50	50	ENSMUST00000132795.8	ENSMUSG00000026418.17	Tnni1	chr1	protein_coding	troponin I, skeletal, slow 1
chr1	135727234	135730332	+	135727234;135727758	135727711;135730332	ES	0.5	50	50	ENSMUST00000152208.8	ENSMUSG00000026418.17	Tnni1	chr1	protein_coding	troponin I, skeletal, slow 1
chr1	135727276	135727711	+	135727234	135727711	A5SS	0.33	50	50	ENSMUST00000152208.8	ENSMUSG00000026418.17	Tnni1	chr1	protein_coding	troponin I, skeletal, slow 1
chr1	135727234	135730332	+	135727234	135727711	A3SS&ES	0.5	50	50	ENSMUST00000137331.8	ENSMUSG00000026418.17	Tnni1	chr1	protein_coding	troponin I, skeletal, slow 1
chr1	135757905	135758638	+	135757470	135758638	A5SS	0.33	50	50	ENSMUST00000038760.10	ENSMUSG00000041782.15	Lad1	chr1	protein_coding	ladinin
chr1	135758505	135758638	+	135757470	135758638	A5SS	0.33	50	50	ENSMUST00000038760.10	ENSMUSG00000041782.15	Lad1	chr1	protein_coding	ladinin
chr1	135758505	135758638	+	135757905	135758638	A5SS	0.33	50	50	ENSMUST00000190773.7	ENSMUSG00000041782.15	Lad1	chr1	protein_coding	ladinin
chr1	135769649	135771523	+	135769649;135769764	135769753;135771523	ES	0.5	50	50	ENSMUST00000188028.7	ENSMUSG00000026414.14	Tnnt2	chr1	protein_coding	troponin T2, cardiac
chr1	135769764	135773293	+	135769764;135771552	135771523;135773293	ES	0.33	50	50	ENSMUST00000188028.7	ENSMUSG00000026414.14	Tnnt2	chr1	protein_coding	troponin T2, cardiac
chr1	135777198;135778125	135778117;135778449	+	135777198	135778449	cassetteExon	0.5	100	100	ENSMUST00000188028.7	ENSMUSG00000026414.14	Tnnt2	chr1	protein_coding	troponin T2, cardiac
chr1	135764184	135765886	+	135764184	135768603	A3SS	0.33	50	50	ENSMUST00000188028.7	ENSMUSG00000026414.14	Tnnt2	chr1	protein_coding	troponin T2, cardiac
chr1	135764184	135768599	+	135764184	135768603	A3SS	0.33	50	50	ENSMUST00000188028.7	ENSMUSG00000026414.14	Tnnt2	chr1	protein_coding	troponin T2, cardiac
chr1	135768650	135771512	+	135768650	135769639	A3SS&ES	0.33	50	50	ENSMUST00000188028.7	ENSMUSG00000026414.14	Tnnt2	chr1	protein_coding	troponin T2, cardiac
chr1	135768650	135773245	+	135768650	135769639	A3SS&ES	0.33	50	50	ENSMUST00000188028.7	ENSMUSG00000026414.14	Tnnt2	chr1	protein_coding	troponin T2, cardiac
chr1	135764184;135765917	135765886;135768599	+	135764184	135768599	cassetteExon	0.5	100	100	ENSMUST00000178204.8	ENSMUSG00000026414.14	Tnnt2	chr1	protein_coding	troponin T2, cardiac
chr1	135769649	135773293	+	135771552	135773293	A5SS&ES	0.33	50	50	ENSMUST00000178204.8	ENSMUSG00000026414.14	Tnnt2	chr1	protein_coding	troponin T2, cardiac
chr1	135769764	135773293	+	135771552	135773293	A5SS&ES	0.33	50	50	ENSMUST00000178204.8	ENSMUSG00000026414.14	Tnnt2	chr1	protein_coding	troponin T2, cardiac
chr1	135768650;135771552	135771512;135773293	+	135768650;135769649	135769639;135773293	MXE	0.5	100	100	ENSMUST00000190451.7	ENSMUSG00000026414.14	Tnnt2	chr1	protein_coding	troponin T2, cardiac
chr1	135769649;135769764	135769753;135773293	+	135769649	135773293	cassetteExon	0.5	100	100	ENSMUST00000190451.7	ENSMUSG00000026414.14	Tnnt2	chr1	protein_coding	troponin T2, cardiac
chr1	135769649;135771552	135771523;135773293	+	135769649	135773293	cassetteExon	0.5	100	100	ENSMUST00000190451.7	ENSMUSG00000026414.14	Tnnt2	chr1	protein_coding	troponin T2, cardiac
chr1	135768650;135771552	135771512;135773293	+	135768650;135769764	135769639;135773293	MXE	0.5	100	100	ENSMUST00000189732.7	ENSMUSG00000026414.14	Tnnt2	chr1	protein_coding	troponin T2, cardiac
chr1	135769649;135771552	135771523;135773293	+	135769649;135769764	135769753;135773293	MXE	0.5	100	100	ENSMUST00000189732.7	ENSMUSG00000026414.14	Tnnt2	chr1	protein_coding	troponin T2, cardiac
chr1	135768650	135771512	+	135768650	135773245	A3SS	0.33	50	50	ENSMUST00000112085.9	ENSMUSG00000026414.14	Tnnt2	chr1	protein_coding	troponin T2, cardiac
chr1	135801383	135803336	-	135801387	135803336	A3SS	0.5	50	50	ENSMUST00000027667.13	ENSMUSG00000026413.13	Pkp1	chr1	protein_coding	plakophilin 1
chr1	135814615	135817668	-	135814615	135817430	A5SS	0.5	50	50	ENSMUST00000027667.13	ENSMUSG00000026413.13	Pkp1	chr1	protein_coding	plakophilin 1
chr1	135884631	135886677	-	135884525	135886677	A3SS	0.5	50	50	ENSMUST00000140703.8	ENSMUSG00000051985.13	Igfn1	chr1	protein_coding	immunoglobulin-like and fibronectin type III domain containing 1
chr1	135893927	135899644	-	135893927;135898898	135894414;135899644	ES	0.5	50	50	ENSMUST00000166193.9	ENSMUSG00000051985.13	Igfn1	chr1	protein_coding	immunoglobulin-like and fibronectin type III domain containing 1
chr1	135898898	135899644	-	135893927	135899644	A3SS	0.5	50	50	ENSMUST00000124134.3	ENSMUSG00000051985.13	Igfn1	chr1	protein_coding	immunoglobulin-like and fibronectin type III domain containing 1
chr1	135893927	135894414	-	135893927	135899644	A5SS	0.5	50	50	ENSMUST00000124134.3	ENSMUSG00000051985.13	Igfn1	chr1	protein_coding	immunoglobulin-like and fibronectin type III domain containing 1
chr1	135945800	135946244	+	135936153	135946244	A5SS	0.33	50	50	ENSMUST00000165125.8	ENSMUSG00000026411.18	Tmem9	chr1	protein_coding	transmembrane protein 9
chr1	135945986	135946244	+	135936153	135946244	A5SS	0.33	50	50	ENSMUST00000165125.8	ENSMUSG00000026411.18	Tmem9	chr1	protein_coding	transmembrane protein 9
chr1	135961059	135961806	+	135955266	135961806	A5SS	0.5	50	50	ENSMUST00000165125.8	ENSMUSG00000026411.18	Tmem9	chr1	protein_coding	transmembrane protein 9
chr1	135945986	135946244	+	135945800	135946244	A5SS	0.33	50	50	ENSMUST00000063719.15	ENSMUSG00000026411.18	Tmem9	chr1	protein_coding	transmembrane protein 9
chr1	136029300	136033186	+	136029300;136032364	136032308;136033186	ES	0.5	50	50	ENSMUST00000160641.8	ENSMUSG00000026407.18	Cacna1s	chr1	protein_coding	calcium channel, voltage-dependent, L type, alpha 1S subunit
chr1	136045090	136045345	+	136043913	136045345	A5SS	0.5	50	50	ENSMUST00000160641.8	ENSMUSG00000026407.18	Cacna1s	chr1	protein_coding	calcium channel, voltage-dependent, L type, alpha 1S subunit
chr1	136057243	136058759	-	136057243;136058127	136057964;136058759	ES	0.5	50	50	ENSMUST00000134998.8	ENSMUSG00000086264.10	Gm15850	chr1	lncRNA	predicted gene 15850
chr1	136055521	136057131	-	136055524	136057131	A3SS	0.5	50	50	ENSMUST00000134998.8	ENSMUSG00000086264.10	Gm15850	chr1	lncRNA	predicted gene 15850
chr1	136089309	136089702	+	136089309;136089518	136089467;136089702	ES	0.5	50	50	ENSMUST00000075164.11	ENSMUSG00000041642.19	Kif21b	chr1	protein_coding	kinesin family member 21B
chr1	136100740;136101389	136101210;136101775	+	136100740	136101775	cassetteExon	0.5	100	100	ENSMUST00000075164.11	ENSMUSG00000041642.19	Kif21b	chr1	protein_coding	kinesin family member 21B
chr1	136099529	136099897	+	136099443	136099897	A5SS	0.5	50	50	ENSMUST00000075164.11	ENSMUSG00000041642.19	Kif21b	chr1	protein_coding	kinesin family member 21B
chr1	136110515;136111160	136111058;136112003	-	136110515	136112003	cassetteExon	0.5	100	100	ENSMUST00000146112.3	ENSMUSG00000087230.11	Mroh3	chr1	protein_coding	maestro heat-like repeat family member 3
chr1	136118551	136119250	-	136118551;136118783	136118646;136119250	ES	0.5	50	50	ENSMUST00000168561.9	ENSMUSG00000087230.11	Mroh3	chr1	protein_coding	maestro heat-like repeat family member 3
chr1	136135620	136135986	-	136135616	136135986	A3SS	0.5	50	50	ENSMUST00000168561.9	ENSMUSG00000087230.11	Mroh3	chr1	protein_coding	maestro heat-like repeat family member 3
chr1	136155315	136161641	-	136155400	136161641	A3SS	0.5	50	50	ENSMUST00000120339.8	ENSMUSG00000041605.17	Inava	chr1	protein_coding	innate immunity activator
chr1	136155400	136157659	-	136155400	136161641	A5SS	0.33	50	50	ENSMUST00000120339.8	ENSMUSG00000041605.17	Inava	chr1	protein_coding	innate immunity activator
chr1	136155400	136157932	-	136155400	136161641	A5SS	0.33	50	50	ENSMUST00000120339.8	ENSMUSG00000041605.17	Inava	chr1	protein_coding	innate immunity activator
chr1	136155315	136161641	-	136155315	136157932	5pMXE	0.5	50	50	ENSMUST00000150163.8	ENSMUSG00000041605.17	Inava	chr1	protein_coding	innate immunity activator
chr1	136155400	136157932	-	136155315	136157932	A3SS	0.5	50	50	ENSMUST00000150163.8	ENSMUSG00000041605.17	Inava	chr1	protein_coding	innate immunity activator
chr1	136155400	136157659	-	136155400	136157932	A5SS	0.33	50	50	ENSMUST00000144464.7	ENSMUSG00000041605.17	Inava	chr1	protein_coding	innate immunity activator
chr1	136221159;136225054	136225022;136225480	-	136221159;136223265	136221748;136225480	MXE	0.5	100	100	ENSMUST00000048309.12	ENSMUSG00000041570.15	Camsap2	chr1	protein_coding	calmodulin regulated spectrin-associated protein family, member 2
chr1	136202638	136204276	-	136202611	136204276	A3SS	0.5	50	50	ENSMUST00000048309.12	ENSMUSG00000041570.15	Camsap2	chr1	protein_coding	calmodulin regulated spectrin-associated protein family, member 2
chr1	136260899	136273037	-	136252734	136273037	A3SS	0.5	50	50	ENSMUST00000048309.12	ENSMUSG00000041570.15	Camsap2	chr1	protein_coding	calmodulin regulated spectrin-associated protein family, member 2
chr1	136221159;136225054	136225022;136225480	-	136221159	136225480	cassetteExon	0.5	100	100	ENSMUST00000192001.6	ENSMUSG00000041570.15	Camsap2	chr1	protein_coding	calmodulin regulated spectrin-associated protein family, member 2
chr1	136223265	136225480	-	136221159	136225480	A3SS	0.33	50	50	ENSMUST00000192001.6	ENSMUSG00000041570.15	Camsap2	chr1	protein_coding	calmodulin regulated spectrin-associated protein family, member 2
chr1	136221159	136221748	-	136221159	136225480	A5SS	0.33	50	50	ENSMUST00000192001.6	ENSMUSG00000041570.15	Camsap2	chr1	protein_coding	calmodulin regulated spectrin-associated protein family, member 2
chr1	136223265	136225480	-	136225054	136225480	A3SS&ES	0.33	50	50	ENSMUST00000192314.2	ENSMUSG00000041570.15	Camsap2	chr1	protein_coding	calmodulin regulated spectrin-associated protein family, member 2
chr1	136221159	136221748	-	136221159	136225022	A5SS	0.33	50	50	ENSMUST00000192314.2	ENSMUSG00000041570.15	Camsap2	chr1	protein_coding	calmodulin regulated spectrin-associated protein family, member 2
chr1	136358110	136360050	+	136352622	136360050	A5SS	0.5	50	50	ENSMUST00000027655.8	ENSMUSG00000026404.13	Ddx59	chr1	protein_coding	DEAD box helicase 59
chr1	136399312	136404078	+	136399312;136401210	136401123;136404078	ES	0.5	50	50	ENSMUST00000187963.7	ENSMUSG00000041498.14	Kif14	chr1	protein_coding	kinesin family member 14
chr1	136404176	136406882	+	136404176;136406149	136406097;136406882	ES	0.5	50	50	ENSMUST00000187963.7	ENSMUSG00000041498.14	Kif14	chr1	protein_coding	kinesin family member 14
chr1	136404176	136406108	+	136404176	136406097	A3SS	0.25	50	50	ENSMUST00000187963.7	ENSMUSG00000041498.14	Kif14	chr1	protein_coding	kinesin family member 14
chr1	136415205	136417938	+	136415205	136417945	A3SS	0.5	50	50	ENSMUST00000187963.7	ENSMUSG00000041498.14	Kif14	chr1	protein_coding	kinesin family member 14
chr1	136404176	136406882	+	136404176;136406149	136406108;136406882	ES	0.5	50	50	ENSMUST00000195390.6	ENSMUSG00000041498.14	Kif14	chr1	protein_coding	kinesin family member 14
chr1	136404176	136407546	+	136404176;136406912	136406882;136407546	ES	0.5	50	50	ENSMUST00000193587.2	ENSMUSG00000041498.14	Kif14	chr1	protein_coding	kinesin family member 14
chr1	136404176	136406097	+	136404176	136407546	A3SS	0.25	50	50	ENSMUST00000195274.3	ENSMUSG00000041498.14	Kif14	chr1	protein_coding	kinesin family member 14
chr1	136404176	136406108	+	136404176	136407546	A3SS	0.25	50	50	ENSMUST00000195274.3	ENSMUSG00000041498.14	Kif14	chr1	protein_coding	kinesin family member 14
chr1	136552789	136553006	+	136552789	136553010	A3SS	0.5	50	50	ENSMUST00000047734.15	ENSMUSG00000041483.15	Zfp281	chr1	protein_coding	zinc finger protein 281
chr1	136609300	136610240	+	136609300	136616482	A3SS	0.5	50	50	ENSMUST00000180495.8	ENSMUSG00000097113.8	Gm19705	chr1	lncRNA	predicted gene, 19705
chr1	136605004	136609207	+	136603021	136609207	A5SS	0.5	50	50	ENSMUST00000180495.8	ENSMUSG00000097113.8	Gm19705	chr1	lncRNA	predicted gene, 19705
chr1	136611211	136616482	+	136609300	136616482	A5SS	0.33	50	50	ENSMUST00000180495.8	ENSMUSG00000097113.8	Gm19705	chr1	lncRNA	predicted gene, 19705
chr1	136611441	136616482	+	136609300	136616482	A5SS	0.33	50	50	ENSMUST00000180495.8	ENSMUSG00000097113.8	Gm19705	chr1	lncRNA	predicted gene, 19705
chr1	136611441	136616482	+	136611211	136616482	A5SS	0.33	50	50	ENSMUST00000181524.8	ENSMUSG00000097113.8	Gm19705	chr1	lncRNA	predicted gene, 19705
chr1	136876597	136887965	-	136876597;136879902	136879840;136887965	ES	0.5	50	50	ENSMUST00000027649.14	ENSMUSG00000026398.15	Nr5a2	chr1	protein_coding	nuclear receptor subfamily 5, group A, member 2
chr1	136876597	136876697	-	136876597	136879840	A5SS	0.33	50	50	ENSMUST00000027649.14	ENSMUSG00000026398.15	Nr5a2	chr1	protein_coding	nuclear receptor subfamily 5, group A, member 2
chr1	136879902	136881232	-	136879902	136887965	A5SS	0.5	50	50	ENSMUST00000027649.14	ENSMUSG00000026398.15	Nr5a2	chr1	protein_coding	nuclear receptor subfamily 5, group A, member 2
chr1	136876597	136876697	-	136876597	136887965	A5SS	0.33	50	50	ENSMUST00000192357.6	ENSMUSG00000026398.15	Nr5a2	chr1	protein_coding	nuclear receptor subfamily 5, group A, member 2
chr1	137892054	137896851	-	137858579	137896851	A3SS	0.5	50	50	ENSMUST00000182424.2	ENSMUSG00000098145.2	Gm26936	chr1	lncRNA	predicted gene, 26936
chr1	138043380	138054041	-	138043380;138044763	138044692;138054041	ES	0.25	50	50	ENSMUST00000182283.8	ENSMUSG00000026395.17	Ptprc	chr1	protein_coding	protein tyrosine phosphatase, receptor type, C
chr1	138102864	138103313	-	138102864	138102946	5pMXE	0.5	50	50	ENSMUST00000182283.8	ENSMUSG00000026395.17	Ptprc	chr1	protein_coding	protein tyrosine phosphatase, receptor type, C
chr1	138044763;138047904	138047758;138054041	-	138044763	138054041	cassetteExon	0.5	100	100	ENSMUST00000182283.8	ENSMUSG00000026395.17	Ptprc	chr1	protein_coding	protein tyrosine phosphatase, receptor type, C
chr1	138050322	138054041	-	138044763	138054041	A3SS	0.25	50	50	ENSMUST00000182283.8	ENSMUSG00000026395.17	Ptprc	chr1	protein_coding	protein tyrosine phosphatase, receptor type, C
chr1	138044763	138045492	-	138044763	138054041	A5SS	0.33	50	50	ENSMUST00000182283.8	ENSMUSG00000026395.17	Ptprc	chr1	protein_coding	protein tyrosine phosphatase, receptor type, C
chr1	138044763	138047758	-	138044763;138045632	138045492;138047758	ES	0.5	50	50	ENSMUST00000183301.8	ENSMUSG00000026395.17	Ptprc	chr1	protein_coding	protein tyrosine phosphatase, receptor type, C
chr1	138045632	138050194	-	138045632;138047904	138047758;138050194	ES	0.5	50	50	ENSMUST00000183301.8	ENSMUSG00000026395.17	Ptprc	chr1	protein_coding	protein tyrosine phosphatase, receptor type, C
chr1	138047904	138054041	-	138047904;138050322	138050194;138054041	ES	0.25	50	50	ENSMUST00000183301.8	ENSMUSG00000026395.17	Ptprc	chr1	protein_coding	protein tyrosine phosphatase, receptor type, C
chr1	138047904	138054041	-	138043380	138054041	A3SS	0.25	50	50	ENSMUST00000182755.8	ENSMUSG00000026395.17	Ptprc	chr1	protein_coding	protein tyrosine phosphatase, receptor type, C
chr1	138050322	138054041	-	138043380	138054041	A3SS	0.25	50	50	ENSMUST00000182755.8	ENSMUSG00000026395.17	Ptprc	chr1	protein_coding	protein tyrosine phosphatase, receptor type, C
chr1	138045632;138047904	138047758;138054041	-	138045632;138050322	138050194;138054041	MXE	0.5	100	100	ENSMUST00000193650.2	ENSMUSG00000026395.17	Ptprc	chr1	protein_coding	protein tyrosine phosphatase, receptor type, C
chr1	138045632	138050194	-	138047904	138050194	3pMXE	0.5	50	50	ENSMUST00000183262.8	ENSMUSG00000026395.17	Ptprc	chr1	protein_coding	protein tyrosine phosphatase, receptor type, C
chr1	138489523	138547642	-	138489523	138547290	5pMXE	0.5	50	50	ENSMUST00000186017.7	ENSMUSG00000026393.11	Nek7	chr1	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 7
chr1	138430403	138443363	-	138414848	138443363	A3SS	0.5	50	50	ENSMUST00000027642.5	ENSMUSG00000026393.11	Nek7	chr1	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 7
chr1	138414848	138426314	-	138414848	138443363	A5SS	0.5	50	50	ENSMUST00000027642.5	ENSMUSG00000026393.11	Nek7	chr1	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 7
chr1	138599483	138605554	-	138585709	138605554	A3SS	0.5	50	50	ENSMUST00000190707.7	ENSMUSG00000100459.7	Gm5833	chr1	lncRNA	predicted gene 5833
chr1	138766436	138769546	-	138766436;138767813	138767611;138769546	ES	0.5	50	50	ENSMUST00000019374.14	ENSMUSG00000019230.15	Lhx9	chr1	protein_coding	LIM homeobox protein 9
chr1	138759362	138760440	-	138756448	138760440	A3SS	0.5	50	50	ENSMUST00000019374.14	ENSMUSG00000019230.15	Lhx9	chr1	protein_coding	LIM homeobox protein 9
chr1	138781410	138783812	-	138781410	138784319	A5SS	0.5	50	50	ENSMUST00000112025.3	ENSMUSG00000079283.3	2310009B15Rik	chr1	protein_coding	RIKEN cDNA 2310009B15 gene
chr1	138982359	138988013	+	138982359;138986864	138986805;138988013	ES	0.5	50	50	ENSMUST00000200533.5	ENSMUSG00000056268.16	Dennd1b	chr1	protein_coding	DENN/MADD domain containing 1B
chr1	138895566	138950843	+	138893968	138950843	A5SS	0.5	50	50	ENSMUST00000200533.5	ENSMUSG00000056268.16	Dennd1b	chr1	protein_coding	DENN/MADD domain containing 1B
chr1	139018293	139020293	+	139018293	139029706	A3SS	0.5	50	50	ENSMUST00000168527.8	ENSMUSG00000056268.16	Dennd1b	chr1	protein_coding	DENN/MADD domain containing 1B
chr1	139021718	139029706	+	139018293	139029706	A5SS	0.5	50	50	ENSMUST00000168527.8	ENSMUSG00000056268.16	Dennd1b	chr1	protein_coding	DENN/MADD domain containing 1B
chr1	139049821	139061409	+	139038223	139061409	A5SS	0.33	50	50	ENSMUST00000168527.8	ENSMUSG00000056268.16	Dennd1b	chr1	protein_coding	DENN/MADD domain containing 1B
chr1	139053885	139061409	+	139038223	139061409	A5SS	0.33	50	50	ENSMUST00000168527.8	ENSMUSG00000056268.16	Dennd1b	chr1	protein_coding	DENN/MADD domain containing 1B
chr1	138950886	138967738	+	138950886	138981084	A3SS	0.5	50	50	ENSMUST00000198759.5	ENSMUSG00000056268.16	Dennd1b	chr1	protein_coding	DENN/MADD domain containing 1B
chr1	138969781	138981084	+	138950886	138981084	A5SS	0.5	50	50	ENSMUST00000198759.5	ENSMUSG00000056268.16	Dennd1b	chr1	protein_coding	DENN/MADD domain containing 1B
chr1	139029831	139038122	+	139029831	139067119	A3SS	0.5	50	50	ENSMUST00000200429.5	ENSMUSG00000056268.16	Dennd1b	chr1	protein_coding	DENN/MADD domain containing 1B
chr1	139061499	139067119	+	139029831	139067119	A5SS	0.5	50	50	ENSMUST00000200429.5	ENSMUSG00000056268.16	Dennd1b	chr1	protein_coding	DENN/MADD domain containing 1B
chr1	139018293	139029706	+	139018293;139021718	139020293;139029706	ES	0.5	50	50	ENSMUST00000198418.2	ENSMUSG00000056268.16	Dennd1b	chr1	protein_coding	DENN/MADD domain containing 1B
chr1	139049821;139053885	139053815;139061409	+	139049821	139061409	cassetteExon	0.5	100	100	ENSMUST00000200295.5	ENSMUSG00000056268.16	Dennd1b	chr1	protein_coding	DENN/MADD domain containing 1B
chr1	139176813	139250965	-	139176813;139242491	139242309;139250965	ES	0.33	50	50	ENSMUST00000059825.12	ENSMUSG00000063681.15	Crb1	chr1	protein_coding	crumbs family member 1, photoreceptor morphogenesis associated
chr1	139242491	139255889	-	139242491;139251104	139250965;139255889	ES	0.5	50	50	ENSMUST00000059825.12	ENSMUSG00000063681.15	Crb1	chr1	protein_coding	crumbs family member 1, photoreceptor morphogenesis associated
chr1	139176813;139199313	139199145;139250965	-	139176813;139242491	139242309;139250965	MXE	0.5	100	100	ENSMUST00000059825.12	ENSMUSG00000063681.15	Crb1	chr1	protein_coding	crumbs family member 1, photoreceptor morphogenesis associated
chr1	139176813	139183289	-	139176813	139242309	A5SS	0.25	50	50	ENSMUST00000059825.12	ENSMUSG00000063681.15	Crb1	chr1	protein_coding	crumbs family member 1, photoreceptor morphogenesis associated
chr1	139176813;139199313	139199145;139250965	-	139176813	139250965	cassetteExon	0.5	100	100	ENSMUST00000198445.5	ENSMUSG00000063681.15	Crb1	chr1	protein_coding	crumbs family member 1, photoreceptor morphogenesis associated
chr1	139176813;139242491	139242309;139255889	-	139176813;139251104	139250965;139255889	MXE	0.5	100	100	ENSMUST00000198445.5	ENSMUSG00000063681.15	Crb1	chr1	protein_coding	crumbs family member 1, photoreceptor morphogenesis associated
chr1	139176813	139183289	-	139176813	139250965	A5SS	0.25	50	50	ENSMUST00000198445.5	ENSMUSG00000063681.15	Crb1	chr1	protein_coding	crumbs family member 1, photoreceptor morphogenesis associated
chr1	139176813	139199145	-	139176813	139183289	5pMXE	0.25	50	50	ENSMUST00000199291.2	ENSMUSG00000063681.15	Crb1	chr1	protein_coding	crumbs family member 1, photoreceptor morphogenesis associated
chr1	139176813;139242491	139242309;139255889	-	139176813;139251104	139199145;139255889	MXE	0.5	100	100	ENSMUST00000200340.2	ENSMUSG00000063681.15	Crb1	chr1	protein_coding	crumbs family member 1, photoreceptor morphogenesis associated
chr1	139176813	139199145	-	139176813	139242309	A5SS	0.25	50	50	ENSMUST00000197035.2	ENSMUSG00000063681.15	Crb1	chr1	protein_coding	crumbs family member 1, photoreceptor morphogenesis associated
chr1	139350161	139350772	+	139350064	139350772	A5SS	0.5	50	50	ENSMUST00000200243.5	ENSMUSG00000033964.13	Zbtb41	chr1	protein_coding	zinc finger and BTB domain containing 41
chr1	139404640	139405084	+	139404640	139410076	A3SS	0.5	50	50	ENSMUST00000200083.5	ENSMUSG00000033952.15	Aspm	chr1	protein_coding	abnormal spindle microtubule assembly
chr1	139408878	139410076	+	139404640	139410076	A5SS	0.5	50	50	ENSMUST00000200083.5	ENSMUSG00000033952.15	Aspm	chr1	protein_coding	abnormal spindle microtubule assembly
chr1	139411360	139413438	+	139410242	139413438	A5SS	0.5	50	50	ENSMUST00000200083.5	ENSMUSG00000033952.15	Aspm	chr1	protein_coding	abnormal spindle microtubule assembly
chr1	139404640	139410076	+	139404640;139408878	139405084;139410076	ES	0.5	50	50	ENSMUST00000053364.12	ENSMUSG00000033952.15	Aspm	chr1	protein_coding	abnormal spindle microtubule assembly
chr1	139445092	139445490	+	139445092	139450081	A3SS	0.5	50	50	ENSMUST00000027615.7	ENSMUSG00000026368.7	F13b	chr1	protein_coding	coagulation factor XIII, beta subunit
chr1	139660214	139661149	-	139660214;139660987	139660778;139661149	ES	0.5	50	50	ENSMUST00000111986.8	ENSMUSG00000070594.11	Cfhr4	chr1	protein_coding	complement factor H-related 4
chr1	139629719;139659444	139659268;139660041	-	139629719	139660041	cassetteExon	0.5	100	100	ENSMUST00000111986.8	ENSMUSG00000070594.11	Cfhr4	chr1	protein_coding	complement factor H-related 4
chr1	139667377	139668153	-	139667380	139668153	A3SS	0.5	50	50	ENSMUST00000111986.8	ENSMUSG00000070594.11	Cfhr4	chr1	protein_coding	complement factor H-related 4
chr1	139750104;139773083	139772910;139786293	-	139750104;139758975	139758802;139786293	MXE	0.5	100	100	ENSMUST00000194186.6	ENSMUSG00000033898.18	Cfhr2	chr1	protein_coding	complement factor H-related 2
chr1	139738757	139741172	-	139733215	139741172	A3SS	0.5	50	50	ENSMUST00000194186.6	ENSMUSG00000033898.18	Cfhr2	chr1	protein_coding	complement factor H-related 2
chr1	140016578	140028546	-	140016578;140026784	140026608;140028546	ES	0.5	50	50	ENSMUST00000192880.6	ENSMUSG00000026365.16	Cfh	chr1	protein_coding	complement component factor h
chr1	140064628	140075393	-	140064628;140071842	140071669;140075393	ES	0.5	50	50	ENSMUST00000192880.6	ENSMUSG00000026365.16	Cfh	chr1	protein_coding	complement component factor h
chr1	140016626	140026608	-	140016578	140026608	A3SS	0.5	50	50	ENSMUST00000192880.6	ENSMUSG00000026365.16	Cfh	chr1	protein_coding	complement component factor h
chr1	140047791	140063885	-	140028722	140063885	A3SS	0.5	50	50	ENSMUST00000192880.6	ENSMUSG00000026365.16	Cfh	chr1	protein_coding	complement component factor h
chr1	140028722	140029323	-	140028722	140063885	A5SS	0.5	50	50	ENSMUST00000192880.6	ENSMUSG00000026365.16	Cfh	chr1	protein_coding	complement component factor h
chr1	140029496	140030446	-	140029496;140030284	140030075;140030446	ES	0.5	50	50	ENSMUST00000111976.9	ENSMUSG00000026365.16	Cfh	chr1	protein_coding	complement component factor h
chr1	140036681	140046325	-	140040344	140046325	A3SS&ES	0.5	50	50	ENSMUST00000111976.9	ENSMUSG00000026365.16	Cfh	chr1	protein_coding	complement component factor h
chr1	140016578	140028546	-	140026784	140028546	A3SS&ES	0.5	50	50	ENSMUST00000123238.2	ENSMUSG00000026365.16	Cfh	chr1	protein_coding	complement component factor h
chr1	140174089	140278946	+	140174089;140261015	140260928;140278946	ES	0.5	50	50	ENSMUST00000239229.2	ENSMUSG00000052726.17	Kcnt2	chr1	protein_coding	potassium channel, subfamily T, member 2
chr1	140378042	140435438	+	140378042;140411971	140411863;140435438	ES	0.5	50	50	ENSMUST00000120709.8	ENSMUSG00000052726.17	Kcnt2	chr1	protein_coding	potassium channel, subfamily T, member 2
chr1	140411971	140437122	+	140411971;140435587	140435438;140437122	ES	0.5	50	50	ENSMUST00000120709.8	ENSMUSG00000052726.17	Kcnt2	chr1	protein_coding	potassium channel, subfamily T, member 2
chr1	140480809	140501333	+	140480809;140498221	140498120;140501333	ES	0.5	50	50	ENSMUST00000120709.8	ENSMUSG00000052726.17	Kcnt2	chr1	protein_coding	potassium channel, subfamily T, member 2
chr1	140450998;140458562	140458491;140461599	+	140450998	140461599	cassetteExon	0.5	100	100	ENSMUST00000120709.8	ENSMUSG00000052726.17	Kcnt2	chr1	protein_coding	potassium channel, subfamily T, member 2
chr1	140502595;140506213	140506193;140511757	+	140502595	140511757	cassetteExon	0.5	100	100	ENSMUST00000120709.8	ENSMUSG00000052726.17	Kcnt2	chr1	protein_coding	potassium channel, subfamily T, member 2
chr1	140371179	140377934	+	140359171	140377934	A5SS	0.5	50	50	ENSMUST00000120709.8	ENSMUSG00000052726.17	Kcnt2	chr1	protein_coding	potassium channel, subfamily T, member 2
chr1	140378042;140435587	140435438;140437122	+	140378042;140411971	140411863;140437122	MXE	0.5	100	100	ENSMUST00000119786.8	ENSMUSG00000052726.17	Kcnt2	chr1	protein_coding	potassium channel, subfamily T, member 2
chr1	140446709	140480698	+	140446709	140450826	3pMXE	0.5	50	50	ENSMUST00000145077.3	ENSMUSG00000052726.17	Kcnt2	chr1	protein_coding	potassium channel, subfamily T, member 2
chr1	140461733	140480698	+	140446709	140480698	A5SS	0.5	50	50	ENSMUST00000193606.2	ENSMUSG00000052726.17	Kcnt2	chr1	protein_coding	potassium channel, subfamily T, member 2
chr1	143532204	143543363	-	143510827	143543363	A3SS	0.5	50	50	ENSMUST00000018337.9	ENSMUSG00000026361.10	Cdc73	chr1	protein_coding	cell division cycle 73, Paf1/RNA polymerase II complex component
chr1	143510827	143516170	-	143510827	143543363	A5SS	0.5	50	50	ENSMUST00000018337.9	ENSMUSG00000026361.10	Cdc73	chr1	protein_coding	cell division cycle 73, Paf1/RNA polymerase II complex component
chr1	143575060	143577712	-	143575060	143578232	A5SS	0.5	50	50	ENSMUST00000018337.9	ENSMUSG00000026361.10	Cdc73	chr1	protein_coding	cell division cycle 73, Paf1/RNA polymerase II complex component
chr1	143620961	143622246	+	143620961;143621832	143621616;143622246	ES	0.5	50	50	ENSMUST00000185367.2	ENSMUSG00000018196.19	Glrx2	chr1	protein_coding	glutaredoxin 2 (thioltransferase)
chr1	143615422	143617386	+	143615180	143617386	A5SS	0.25	50	50	ENSMUST00000185367.2	ENSMUSG00000018196.19	Glrx2	chr1	protein_coding	glutaredoxin 2 (thioltransferase)
chr1	143615496	143617386	+	143615180	143617386	A5SS	0.25	50	50	ENSMUST00000185367.2	ENSMUSG00000018196.19	Glrx2	chr1	protein_coding	glutaredoxin 2 (thioltransferase)
chr1	143616217	143617386	+	143615180	143617386	A5SS	0.25	50	50	ENSMUST00000185367.2	ENSMUSG00000018196.19	Glrx2	chr1	protein_coding	glutaredoxin 2 (thioltransferase)
chr1	143617449	143618380	+	143617449	143620785	A3SS	0.5	50	50	ENSMUST00000145969.8	ENSMUSG00000018196.19	Glrx2	chr1	protein_coding	glutaredoxin 2 (thioltransferase)
chr1	143617492	143620785	+	143617449	143620785	A5SS	0.5	50	50	ENSMUST00000145969.8	ENSMUSG00000018196.19	Glrx2	chr1	protein_coding	glutaredoxin 2 (thioltransferase)
chr1	143617492	143620785	+	143617492	143618380	3pMXE	0.5	50	50	ENSMUST00000126514.2	ENSMUSG00000018196.19	Glrx2	chr1	protein_coding	glutaredoxin 2 (thioltransferase)
chr1	143615422	143617386	+	143615496	143617386	A5SS	0.25	50	50	ENSMUST00000126514.2	ENSMUSG00000018196.19	Glrx2	chr1	protein_coding	glutaredoxin 2 (thioltransferase)
chr1	143616217	143617386	+	143615496	143617386	A5SS	0.25	50	50	ENSMUST00000126514.2	ENSMUSG00000018196.19	Glrx2	chr1	protein_coding	glutaredoxin 2 (thioltransferase)
chr1	143617449	143618380	+	143617492	143618380	A5SS	0.5	50	50	ENSMUST00000126514.2	ENSMUSG00000018196.19	Glrx2	chr1	protein_coding	glutaredoxin 2 (thioltransferase)
chr1	143616217	143617386	+	143615422	143617386	A5SS	0.25	50	50	ENSMUST00000111957.10	ENSMUSG00000018196.19	Glrx2	chr1	protein_coding	glutaredoxin 2 (thioltransferase)
chr1	143620961	143622246	+	143621832	143622246	5pMXE	0.5	50	50	ENSMUST00000152435.2	ENSMUSG00000018196.19	Glrx2	chr1	protein_coding	glutaredoxin 2 (thioltransferase)
chr1	143661973	143670221	+	143661973;143670140	143670015;143670221	ES	0.5	50	50	ENSMUST00000189936.7	ENSMUSG00000018189.13	Uchl5	chr1	protein_coding	ubiquitin carboxyl-terminal esterase L5
chr1	143677971;143678815	143678666;143682422	+	143677971	143682422	cassetteExon	0.5	100	100	ENSMUST00000189936.7	ENSMUSG00000018189.13	Uchl5	chr1	protein_coding	ubiquitin carboxyl-terminal esterase L5
chr1	143674231	143675662	+	143674231	143675659	A3SS	0.5	50	50	ENSMUST00000189936.7	ENSMUSG00000018189.13	Uchl5	chr1	protein_coding	ubiquitin carboxyl-terminal esterase L5
chr1	144051632	144052854	-	144051632	144052999	A5SS	0.5	50	50	ENSMUST00000052375.8	ENSMUSG00000051079.9	Rgs13	chr1	protein_coding	regulator of G-protein signaling 13
chr1	144123705	144124639	-	144123705;144124297	144124217;144124639	ES	0.33	50	50	ENSMUST00000189061.7	ENSMUSG00000026358.14	Rgs1	chr1	protein_coding	regulator of G-protein signaling 1
chr1	144124346	144124639	-	144124297	144124639	A3SS	0.33	50	50	ENSMUST00000189061.7	ENSMUSG00000026358.14	Rgs1	chr1	protein_coding	regulator of G-protein signaling 1
chr1	144123705	144124639	-	144123705	144124217	A5SS	0.5	50	50	ENSMUST00000167317.8	ENSMUSG00000026358.14	Rgs1	chr1	protein_coding	regulator of G-protein signaling 1
chr1	144123705	144124639	-	144124297	144124639	A3SS	0.33	50	50	ENSMUST00000172388.8	ENSMUSG00000026358.14	Rgs1	chr1	protein_coding	regulator of G-protein signaling 1
chr1	144123705	144124639	-	144123705;144124346	144124217;144124639	ES	0.33	50	50	ENSMUST00000169409.3	ENSMUSG00000026358.14	Rgs1	chr1	protein_coding	regulator of G-protein signaling 1
chr1	144412734;144417039	144416963;144421048	-	144412734	144421048	cassetteExon	0.5	100	100	ENSMUST00000184008.3	ENSMUSG00000098509.3	Rgs21	chr1	protein_coding	regulator of G-protein signalling 21
chr1	144421120	144427231	-	144421120	144443100	A5SS	0.5	50	50	ENSMUST00000184008.3	ENSMUSG00000098509.3	Rgs21	chr1	protein_coding	regulator of G-protein signalling 21
chr1	146302828	146303348	-	146298778	146303348	A3SS	0.5	50	50	ENSMUST00000186665.7	ENSMUSG00000099964.7	Gm29514	chr1	lncRNA	predicted gene 29514
chr1	146320628	146370638	-	146307165	146370638	A3SS	0.5	50	50	ENSMUST00000185686.2	ENSMUSG00000099964.7	Gm29514	chr1	lncRNA	predicted gene 29514
chr1	146307165	146316741	-	146307165	146370638	A5SS	0.5	50	50	ENSMUST00000185686.2	ENSMUSG00000099964.7	Gm29514	chr1	lncRNA	predicted gene 29514
chr1	146390691;146440268	146440203;146558314	+	146390691	146558314	cassetteExon	0.5	100	100	ENSMUST00000074622.11	ENSMUSG00000035131.15	Brinp3	chr1	protein_coding	bone morphogenetic protein/retinoic acid inducible neural specific 3
chr1	146373478	146390406	+	146371815	146390406	A5SS	0.33	50	50	ENSMUST00000074622.11	ENSMUSG00000035131.15	Brinp3	chr1	protein_coding	bone morphogenetic protein/retinoic acid inducible neural specific 3
chr1	146374573	146390406	+	146371815	146390406	A5SS	0.33	50	50	ENSMUST00000074622.11	ENSMUSG00000035131.15	Brinp3	chr1	protein_coding	bone morphogenetic protein/retinoic acid inducible neural specific 3
chr1	146374573	146390406	+	146373478	146390406	A5SS	0.33	50	50	ENSMUST00000132847.8	ENSMUSG00000035131.15	Brinp3	chr1	protein_coding	bone morphogenetic protein/retinoic acid inducible neural specific 3
chr1	149300348	149301092	-	149289230	149301092	A3SS	0.5	50	50	ENSMUST00000191253.7	ENSMUSG00000101011.7	Gm29398	chr1	lncRNA	predicted gene 29398
chr1	149778193	149808409	-	149778193;149797887	149797806;149808409	ES	0.5	50	50	ENSMUST00000070200.15	ENSMUSG00000056220.15	Pla2g4a	chr1	protein_coding	phospholipase A2, group IVA (cytosolic, calcium-dependent)
chr1	149776964	149777876	-	149776964	149778045	A5SS	0.5	50	50	ENSMUST00000070200.15	ENSMUSG00000056220.15	Pla2g4a	chr1	protein_coding	phospholipase A2, group IVA (cytosolic, calcium-dependent)
chr1	149797887	149797995	-	149797887	149808409	A5SS	0.5	50	50	ENSMUST00000070200.15	ENSMUSG00000056220.15	Pla2g4a	chr1	protein_coding	phospholipase A2, group IVA (cytosolic, calcium-dependent)
chr1	149778193	149808409	-	149797887	149808409	3pMXE	0.5	50	50	ENSMUST00000142040.2	ENSMUSG00000056220.15	Pla2g4a	chr1	protein_coding	phospholipase A2, group IVA (cytosolic, calcium-dependent)
chr1	149976209	149976725	+	149976026	149976725	A5SS	0.5	50	50	ENSMUST00000035065.9	ENSMUSG00000032487.9	Ptgs2	chr1	protein_coding	prostaglandin-endoperoxide synthase 2
chr1	150195239	150204067	+	150195251	150204067	A5SS	0.5	50	50	ENSMUST00000165062.8	ENSMUSG00000006007.15	Pdc	chr1	protein_coding	phosducin
chr1	150251375	150257250	-	150251375;150256128	150256063;150257250	ES	0.5	50	50	ENSMUST00000111913.9	ENSMUSG00000006010.15	Odr4	chr1	protein_coding	odr4 GPCR localization factor homolog
chr1	150256128	150258019	-	150256128;150257345	150257250;150258019	ES	0.5	50	50	ENSMUST00000111913.9	ENSMUSG00000006010.15	Odr4	chr1	protein_coding	odr4 GPCR localization factor homolog
chr1	150264370	150265987	-	150264408	150265987	A3SS	0.5	50	50	ENSMUST00000111913.9	ENSMUSG00000006010.15	Odr4	chr1	protein_coding	odr4 GPCR localization factor homolog
chr1	150247950	150250530	-	150247950	150250546	A5SS	0.5	50	50	ENSMUST00000111913.9	ENSMUSG00000006010.15	Odr4	chr1	protein_coding	odr4 GPCR localization factor homolog
chr1	150266107	150268355	-	150266107	150268441	A5SS	0.5	50	50	ENSMUST00000111913.9	ENSMUSG00000006010.15	Odr4	chr1	protein_coding	odr4 GPCR localization factor homolog
chr1	150251375;150257345	150257250;150258019	-	150251375;150256128	150256063;150258019	MXE	0.5	100	100	ENSMUST00000097547.10	ENSMUSG00000006010.15	Odr4	chr1	protein_coding	odr4 GPCR localization factor homolog
chr1	150321714	150321875	+	150321714	150321836	A3SS	0.5	50	50	ENSMUST00000124973.9	ENSMUSG00000006005.19	Tpr	chr1	protein_coding	translocated promoter region, nuclear basket protein
chr1	150324694	150324894	+	150323381	150324894	A5SS	0.5	50	50	ENSMUST00000124973.9	ENSMUSG00000006005.19	Tpr	chr1	protein_coding	translocated promoter region, nuclear basket protein
chr1	150336522	150341249	-	150336522;150337970	150337848;150341249	ES	0.5	50	50	ENSMUST00000006171.16	ENSMUSG00000006014.17	Prg4	chr1	protein_coding	proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein)
chr1	150334043	150336403	-	150332088	150336403	A3SS	0.5	50	50	ENSMUST00000006171.16	ENSMUSG00000006014.17	Prg4	chr1	protein_coding	proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein)
chr1	150332088	150333239	-	150332088	150336403	A5SS	0.5	50	50	ENSMUST00000006171.16	ENSMUSG00000006014.17	Prg4	chr1	protein_coding	proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein)
chr1	150439644	150449227	-	150439644;150441194	150441068;150449227	ES	0.5	50	50	ENSMUST00000074783.12	ENSMUSG00000066842.19	Hmcn1	chr1	protein_coding	hemicentin 1
chr1	150449346	150455979	-	150449346;150453373	150453023;150455979	ES	0.5	50	50	ENSMUST00000074783.12	ENSMUSG00000066842.19	Hmcn1	chr1	protein_coding	hemicentin 1
chr1	150456107	150456306	-	150456107	150457974	A5SS	0.5	50	50	ENSMUST00000074783.12	ENSMUSG00000066842.19	Hmcn1	chr1	protein_coding	hemicentin 1
chr1	150439644	150449227	-	150439644	150441068	5pMXE	0.5	50	50	ENSMUST00000151899.2	ENSMUSG00000066842.19	Hmcn1	chr1	protein_coding	hemicentin 1
chr1	150449346	150455979	-	150453373	150455979	3pMXE	0.5	50	50	ENSMUST00000137909.2	ENSMUSG00000066842.19	Hmcn1	chr1	protein_coding	hemicentin 1
chr1	150501528	150658103	+	150501528	150539042	3pMXE	0.5	50	50	ENSMUST00000177239.3	ENSMUSG00000093650.3	Gm20631	chr1	lncRNA	predicted gene 20631
chr1	151229844	151231880	+	151229844;151230510	151230385;151231880	ES	0.5	50	50	ENSMUST00000023918.13	ENSMUSG00000023150.15	Ivns1abp	chr1	protein_coding	influenza virus NS1A binding protein
chr1	151230510	151230918	+	151230510	151231880	A3SS	0.5	50	50	ENSMUST00000023918.13	ENSMUSG00000023150.15	Ivns1abp	chr1	protein_coding	influenza virus NS1A binding protein
chr1	151229844	151231880	+	151229844	151230385	A3SS&ES	0.5	50	50	ENSMUST00000111887.10	ENSMUSG00000023150.15	Ivns1abp	chr1	protein_coding	influenza virus NS1A binding protein
chr1	151260255	151267187	-	151260255;151264519	151264371;151267187	ES	0.5	50	50	ENSMUST00000064771.12	ENSMUSG00000052748.15	Swt1	chr1	protein_coding	SWT1 RNA endoribonuclease homolog (S. cerevisiae)
chr1	151273102	151278706	-	151273102;151276924	151276831;151278706	ES	0.5	50	50	ENSMUST00000064771.12	ENSMUSG00000052748.15	Swt1	chr1	protein_coding	SWT1 RNA endoribonuclease homolog (S. cerevisiae)
chr1	151273102	151278706	-	151276924	151278706	3pMXE	0.5	50	50	ENSMUST00000129939.2	ENSMUSG00000052748.15	Swt1	chr1	protein_coding	SWT1 RNA endoribonuclease homolog (S. cerevisiae)
chr1	151288597	151295851	-	151283386	151295851	A3SS	0.5	50	50	ENSMUST00000129939.2	ENSMUSG00000052748.15	Swt1	chr1	protein_coding	SWT1 RNA endoribonuclease homolog (S. cerevisiae)
chr1	151283386	151286522	-	151283386	151295851	A5SS	0.5	50	50	ENSMUST00000129939.2	ENSMUSG00000052748.15	Swt1	chr1	protein_coding	SWT1 RNA endoribonuclease homolog (S. cerevisiae)
chr1	151304681	151309545	+	151304853	151309545	A5SS	0.5	50	50	ENSMUST00000188179.7	ENSMUSG00000053286.12	Trmt1l	chr1	protein_coding	tRNA methyltransferase 1 like
chr1	151319077	151323977	+	151319077	151324005	A3SS	0.5	50	50	ENSMUST00000065625.12	ENSMUSG00000053286.12	Trmt1l	chr1	protein_coding	tRNA methyltransferase 1 like
chr1	151349095	151352623	-	151349095	151351891	5pMXE	0.33	50	50	ENSMUST00000190070.7	ENSMUSG00000026484.14	Rnf2	chr1	protein_coding	ring finger protein 2
chr1	151347168	151347389	-	151334103	151347389	A3SS	0.5	50	50	ENSMUST00000190070.7	ENSMUSG00000026484.14	Rnf2	chr1	protein_coding	ring finger protein 2
chr1	151349095	151349845	-	151349095	151351891	A5SS	0.33	50	50	ENSMUST00000190070.7	ENSMUSG00000026484.14	Rnf2	chr1	protein_coding	ring finger protein 2
chr1	151349095	151352623	-	151349095;151352106	151351891;151352623	ES	0.5	50	50	ENSMUST00000187048.7	ENSMUSG00000026484.14	Rnf2	chr1	protein_coding	ring finger protein 2
chr1	151354376	151376470	-	151354376;151363206	151363023;151376470	ES	0.33	50	50	ENSMUST00000187048.7	ENSMUSG00000026484.14	Rnf2	chr1	protein_coding	ring finger protein 2
chr1	151354376;151356890	151356706;151376470	-	151354376;151363206	151363023;151376470	MXE	0.5	100	100	ENSMUST00000187048.7	ENSMUSG00000026484.14	Rnf2	chr1	protein_coding	ring finger protein 2
chr1	151354376;151356890	151356706;151376470	-	151354376	151376470	cassetteExon	0.5	100	100	ENSMUST00000076110.11	ENSMUSG00000026484.14	Rnf2	chr1	protein_coding	ring finger protein 2
chr1	151349095	151349845	-	151349095	151352623	A5SS	0.33	50	50	ENSMUST00000186415.7	ENSMUSG00000026484.14	Rnf2	chr1	protein_coding	ring finger protein 2
chr1	151584955;151590413	151590259;151591411	+	151584955	151591411	cassetteExon	0.5	100	100	ENSMUST00000148810.8	ENSMUSG00000026483.14	Niban1	chr1	protein_coding	niban apoptosis regulator 1
chr1	151552983	151565270	+	151525194	151565270	A5SS	0.5	50	50	ENSMUST00000148810.8	ENSMUSG00000026483.14	Niban1	chr1	protein_coding	niban apoptosis regulator 1
chr1	151687455	151694061	+	151687455;151688552	151688505;151694061	ES	0.33	50	50	ENSMUST00000188145.7	ENSMUSG00000043019.13	Edem3	chr1	protein_coding	ER degradation enhancer, mannosidase alpha-like 3
chr1	151680570	151681598	+	151680570	151681601	A3SS	0.5	50	50	ENSMUST00000188145.7	ENSMUSG00000043019.13	Edem3	chr1	protein_coding	ER degradation enhancer, mannosidase alpha-like 3
chr1	151681697	151683117	+	151681754	151683117	A5SS	0.5	50	50	ENSMUST00000188145.7	ENSMUSG00000043019.13	Edem3	chr1	protein_coding	ER degradation enhancer, mannosidase alpha-like 3
chr1	151688519	151694061	+	151688552	151694061	A5SS	0.33	50	50	ENSMUST00000188145.7	ENSMUSG00000043019.13	Edem3	chr1	protein_coding	ER degradation enhancer, mannosidase alpha-like 3
chr1	151687455;151688519	151688505;151694061	+	151687455	151694061	cassetteExon	0.5	100	100	ENSMUST00000059498.12	ENSMUSG00000043019.13	Edem3	chr1	protein_coding	ER degradation enhancer, mannosidase alpha-like 3
chr1	151796874;151850239	151850103;151856177	-	151796874	151856177	cassetteExon	0.5	100	100	ENSMUST00000187603.7	ENSMUSG00000032666.17	1700025G04Rik	chr1	protein_coding	RIKEN cDNA 1700025G04 gene
chr1	151882518	151930998	-	151882518	151965683	A5SS	0.5	50	50	ENSMUST00000187603.7	ENSMUSG00000032666.17	1700025G04Rik	chr1	protein_coding	RIKEN cDNA 1700025G04 gene
chr1	152247034	152259013	-	152247034;152247646	152247505;152259013	ES	0.5	50	50	ENSMUST00000015124.15	ENSMUSG00000014980.15	Tsen15	chr1	protein_coding	tRNA splicing endonuclease subunit 15
chr1	152259148	152262210	-	152259148;152259531	152259450;152262210	ES	0.5	50	50	ENSMUST00000015124.15	ENSMUSG00000014980.15	Tsen15	chr1	protein_coding	tRNA splicing endonuclease subunit 15
chr1	152247034	152259013	-	152247034	152247505	5pMXE	0.5	50	50	ENSMUST00000161717.2	ENSMUSG00000014980.15	Tsen15	chr1	protein_coding	tRNA splicing endonuclease subunit 15
chr1	152247034	152259013	-	152247646	152259013	3pMXE	0.5	50	50	ENSMUST00000159717.2	ENSMUSG00000014980.15	Tsen15	chr1	protein_coding	tRNA splicing endonuclease subunit 15
chr1	152259148	152262210	-	152259148	152259450	5pMXE	0.5	50	50	ENSMUST00000159717.2	ENSMUSG00000014980.15	Tsen15	chr1	protein_coding	tRNA splicing endonuclease subunit 15
chr1	152379956;152380341	152380069;152382544	+	152379956	152382544	cassetteExon	0.5	100	100	ENSMUST00000044311.9	ENSMUSG00000032649.15	Colgalt2	chr1	protein_coding	collagen beta(1-O)galactosyltransferase 2
chr1	152462366	152550611	-	152462366;152499679	152499569;152550611	ES	0.5	50	50	ENSMUST00000111859.8	ENSMUSG00000026482.14	Rgl1	chr1	protein_coding	ral guanine nucleotide dissociation stimulator,-like 1
chr1	152462366;152487874	152487738;152499569	-	152462366	152499569	cassetteExon	0.5	100	100	ENSMUST00000111859.8	ENSMUSG00000026482.14	Rgl1	chr1	protein_coding	ral guanine nucleotide dissociation stimulator,-like 1
chr1	152462366	152468434	-	152462366	152499569	A5SS	0.25	50	50	ENSMUST00000111859.8	ENSMUSG00000026482.14	Rgl1	chr1	protein_coding	ral guanine nucleotide dissociation stimulator,-like 1
chr1	152499679	152500735	-	152499679	152550611	A5SS	0.5	50	50	ENSMUST00000111859.8	ENSMUSG00000026482.14	Rgl1	chr1	protein_coding	ral guanine nucleotide dissociation stimulator,-like 1
chr1	152462366	152468434	-	152462366	152550611	A5SS	0.25	50	50	ENSMUST00000111857.3	ENSMUSG00000026482.14	Rgl1	chr1	protein_coding	ral guanine nucleotide dissociation stimulator,-like 1
chr1	152462366	152487738	-	152462366	152550611	A5SS	0.25	50	50	ENSMUST00000111857.3	ENSMUSG00000026482.14	Rgl1	chr1	protein_coding	ral guanine nucleotide dissociation stimulator,-like 1
chr1	152462366	152487738	-	152462366	152468434	5pMXE	0.25	50	50	ENSMUST00000128251.8	ENSMUSG00000026482.14	Rgl1	chr1	protein_coding	ral guanine nucleotide dissociation stimulator,-like 1
chr1	152644684	152650011	+	152644684;152647291	152647115;152650011	ES	0.5	50	50	ENSMUST00000077755.11	ENSMUSG00000008475.14	Arpc5	chr1	protein_coding	actin related protein 2/3 complex, subunit 5
chr1	152683768	152686669	+	152683956	152686669	A5SS	0.5	50	50	ENSMUST00000186568.7	ENSMUSG00000026480.13	Ncf2	chr1	protein_coding	neutrophil cytosolic factor 2
chr1	152717344;152719130	152718981;152719787	-	152717344	152719787	cassetteExon	0.5	100	100	ENSMUST00000073441.13	ENSMUSG00000042772.16	Smg7	chr1	protein_coding	Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)
chr1	152721289	152721870	-	152721346	152721870	A3SS	0.5	50	50	ENSMUST00000073441.13	ENSMUSG00000042772.16	Smg7	chr1	protein_coding	Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)
chr1	152721998	152746511	-	152744120	152746511	A3SS&ES	0.5	50	50	ENSMUST00000073441.13	ENSMUSG00000042772.16	Smg7	chr1	protein_coding	Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)
chr1	152722014	152724485	-	152722014	152724347	A5SS	0.5	50	50	ENSMUST00000073441.13	ENSMUSG00000042772.16	Smg7	chr1	protein_coding	Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)
chr1	152746542	152746831	-	152746542	152778260	A5SS	0.33	50	50	ENSMUST00000073441.13	ENSMUSG00000042772.16	Smg7	chr1	protein_coding	Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)
chr1	152746542	152753792	-	152746542	152778260	A5SS	0.33	50	50	ENSMUST00000073441.13	ENSMUSG00000042772.16	Smg7	chr1	protein_coding	Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)
chr1	152746542	152746831	-	152746542	152753792	A5SS	0.33	50	50	ENSMUST00000043560.15	ENSMUSG00000042772.16	Smg7	chr1	protein_coding	Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)
chr1	152988193	152991314	+	152988193;152988834	152988731;152991314	ES	0.5	50	50	ENSMUST00000186368.7	ENSMUSG00000042751.15	Nmnat2	chr1	protein_coding	nicotinamide nucleotide adenylyltransferase 2
chr1	152830944;152843727	152843668;152949543	+	152830944	152949543	cassetteExon	0.5	100	100	ENSMUST00000186368.7	ENSMUSG00000042751.15	Nmnat2	chr1	protein_coding	nicotinamide nucleotide adenylyltransferase 2
chr1	152949631	152950385	+	152949631	152950419	A3SS	0.5	50	50	ENSMUST00000186368.7	ENSMUSG00000042751.15	Nmnat2	chr1	protein_coding	nicotinamide nucleotide adenylyltransferase 2
chr1	152969859	152969957	+	152969859	152987888	A3SS	0.5	50	50	ENSMUST00000186368.7	ENSMUSG00000042751.15	Nmnat2	chr1	protein_coding	nicotinamide nucleotide adenylyltransferase 2
chr1	152909193	152949543	+	152830944	152949543	A5SS	0.33	50	50	ENSMUST00000186368.7	ENSMUSG00000042751.15	Nmnat2	chr1	protein_coding	nicotinamide nucleotide adenylyltransferase 2
chr1	152969300	152969783	+	152966287	152969783	A5SS	0.5	50	50	ENSMUST00000186368.7	ENSMUSG00000042751.15	Nmnat2	chr1	protein_coding	nicotinamide nucleotide adenylyltransferase 2
chr1	152831078	152843668	+	152830944	152843668	A5SS	0.5	50	50	ENSMUST00000186621.2	ENSMUSG00000042751.15	Nmnat2	chr1	protein_coding	nicotinamide nucleotide adenylyltransferase 2
chr1	152909193	152949543	+	152843727	152949543	A5SS	0.33	50	50	ENSMUST00000186621.2	ENSMUSG00000042751.15	Nmnat2	chr1	protein_coding	nicotinamide nucleotide adenylyltransferase 2
chr1	153103456	153104481	-	153095896	153104481	A3SS	0.5	50	50	ENSMUST00000161744.2	ENSMUSG00000026478.15	Lamc1	chr1	protein_coding	laminin, gamma 1
chr1	153107553	153109231	-	153107617	153109231	A3SS	0.5	50	50	ENSMUST00000027752.15	ENSMUSG00000026478.15	Lamc1	chr1	protein_coding	laminin, gamma 1
chr1	153321697	153324647	+	153321697;153323720	153323470;153324647	ES	0.5	50	50	ENSMUST00000042373.12	ENSMUSG00000042708.13	Shcbp1l	chr1	protein_coding	Shc SH2-domain binding protein 1-like
chr1	153313376	153314405	+	153313376	153321544	A3SS	0.5	50	50	ENSMUST00000042373.12	ENSMUSG00000042708.13	Shcbp1l	chr1	protein_coding	Shc SH2-domain binding protein 1-like
chr1	153351455;153352308	153352170;153353787	-	153351455	153353787	cassetteExon	0.5	100	100	ENSMUST00000186380.7	ENSMUSG00000042699.12	Dhx9	chr1	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 9
chr1	153345482	153347366	-	153345487	153347366	A3SS	0.5	50	50	ENSMUST00000186380.7	ENSMUSG00000042699.12	Dhx9	chr1	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 9
chr1	153354727	153356878	-	153354724	153356878	A3SS	0.5	50	50	ENSMUST00000186380.7	ENSMUSG00000042699.12	Dhx9	chr1	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 9
chr1	153541662	153546529	+	153541662;153543699	153543571;153546529	ES	0.5	50	50	ENSMUST00000041776.12	ENSMUSG00000042671.13	Rgs8	chr1	protein_coding	regulator of G-protein signaling 8
chr1	153537059	153541582	+	153529101	153541582	A5SS	0.16	50	50	ENSMUST00000041776.12	ENSMUSG00000042671.13	Rgs8	chr1	protein_coding	regulator of G-protein signaling 8
chr1	153540450	153541582	+	153529101	153541582	A5SS	0.16	50	50	ENSMUST00000041776.12	ENSMUSG00000042671.13	Rgs8	chr1	protein_coding	regulator of G-protein signaling 8
chr1	153541242	153541582	+	153529101	153541582	A5SS	0.16	50	50	ENSMUST00000041776.12	ENSMUSG00000042671.13	Rgs8	chr1	protein_coding	regulator of G-protein signaling 8
chr1	153541284	153541582	+	153529101	153541582	A5SS	0.16	50	50	ENSMUST00000041776.12	ENSMUSG00000042671.13	Rgs8	chr1	protein_coding	regulator of G-protein signaling 8
chr1	153541459	153541582	+	153529101	153541582	A5SS	0.16	50	50	ENSMUST00000041776.12	ENSMUSG00000042671.13	Rgs8	chr1	protein_coding	regulator of G-protein signaling 8
chr1	153540450	153541582	+	153537059	153541582	A5SS	0.16	50	50	ENSMUST00000124500.8	ENSMUSG00000042671.13	Rgs8	chr1	protein_coding	regulator of G-protein signaling 8
chr1	153541242	153541582	+	153537059	153541582	A5SS	0.16	50	50	ENSMUST00000124500.8	ENSMUSG00000042671.13	Rgs8	chr1	protein_coding	regulator of G-protein signaling 8
chr1	153541284	153541582	+	153537059	153541582	A5SS	0.16	50	50	ENSMUST00000124500.8	ENSMUSG00000042671.13	Rgs8	chr1	protein_coding	regulator of G-protein signaling 8
chr1	153541459	153541582	+	153537059	153541582	A5SS	0.16	50	50	ENSMUST00000124500.8	ENSMUSG00000042671.13	Rgs8	chr1	protein_coding	regulator of G-protein signaling 8
chr1	153541242	153541582	+	153540450	153541582	A5SS	0.16	50	50	ENSMUST00000111815.8	ENSMUSG00000042671.13	Rgs8	chr1	protein_coding	regulator of G-protein signaling 8
chr1	153541284	153541582	+	153540450	153541582	A5SS	0.16	50	50	ENSMUST00000111815.8	ENSMUSG00000042671.13	Rgs8	chr1	protein_coding	regulator of G-protein signaling 8
chr1	153541459	153541582	+	153540450	153541582	A5SS	0.16	50	50	ENSMUST00000111815.8	ENSMUSG00000042671.13	Rgs8	chr1	protein_coding	regulator of G-protein signaling 8
chr1	153541284	153541582	+	153541242	153541582	A5SS	0.16	50	50	ENSMUST00000152114.8	ENSMUSG00000042671.13	Rgs8	chr1	protein_coding	regulator of G-protein signaling 8
chr1	153541459	153541582	+	153541242	153541582	A5SS	0.16	50	50	ENSMUST00000152114.8	ENSMUSG00000042671.13	Rgs8	chr1	protein_coding	regulator of G-protein signaling 8
chr1	153541459	153541582	+	153541284	153541582	A5SS	0.16	50	50	ENSMUST00000111812.8	ENSMUSG00000042671.13	Rgs8	chr1	protein_coding	regulator of G-protein signaling 8
chr1	153541662	153546529	+	153543699	153546529	5pMXE	0.5	50	50	ENSMUST00000147794.2	ENSMUSG00000042671.13	Rgs8	chr1	protein_coding	regulator of G-protein signaling 8
chr1	153628693	153631697	+	153628693;153630959	153629353;153631697	ES	0.5	50	50	ENSMUST00000086209.10	ENSMUSG00000066800.12	Rnasel	chr1	protein_coding	ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)
chr1	153625353	153627730	+	153625353	153627605	A3SS	0.5	50	50	ENSMUST00000086209.10	ENSMUSG00000066800.12	Rnasel	chr1	protein_coding	ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)
chr1	153628693	153629381	+	153628693	153629353	A3SS	0.33	50	50	ENSMUST00000086209.10	ENSMUSG00000066800.12	Rnasel	chr1	protein_coding	ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)
chr1	153628693	153631697	+	153628693;153630959	153629381;153631697	ES	0.5	50	50	ENSMUST00000183241.8	ENSMUSG00000066800.12	Rnasel	chr1	protein_coding	ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)
chr1	153628693	153629353	+	153628693	153631697	A3SS	0.33	50	50	ENSMUST00000182538.3	ENSMUSG00000066800.12	Rnasel	chr1	protein_coding	ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)
chr1	153628693	153629381	+	153628693	153631697	A3SS	0.33	50	50	ENSMUST00000182538.3	ENSMUSG00000066800.12	Rnasel	chr1	protein_coding	ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)
chr1	153630959	153631697	+	153628693	153631697	A5SS	0.5	50	50	ENSMUST00000182538.3	ENSMUSG00000066800.12	Rnasel	chr1	protein_coding	ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)
chr1	153666084	153669834	-	153666084;153669625	153669501;153669834	ES	0.5	50	50	ENSMUST00000141249.8	ENSMUSG00000042641.20	Rgsl1	chr1	protein_coding	regulator of G-protein signaling like 1
chr1	153678111	153680356	-	153678111;153679874	153679760;153680356	ES	0.5	50	50	ENSMUST00000141249.8	ENSMUSG00000042641.20	Rgsl1	chr1	protein_coding	regulator of G-protein signaling like 1
chr1	153683620	153687960	-	153683620	153683850	5pMXE	0.5	50	50	ENSMUST00000141249.8	ENSMUSG00000042641.20	Rgsl1	chr1	protein_coding	regulator of G-protein signaling like 1
chr1	153666084	153666332	-	153666084	153669501	A5SS	0.33	50	50	ENSMUST00000141249.8	ENSMUSG00000042641.20	Rgsl1	chr1	protein_coding	regulator of G-protein signaling like 1
chr1	153693357	153698055	-	153693357;153697319	153697097;153698055	ES	0.5	50	50	ENSMUST00000238926.2	ENSMUSG00000042641.20	Rgsl1	chr1	protein_coding	regulator of G-protein signaling like 1
chr1	153703348	153713801	-	153703348;153704405	153704301;153713801	ES	0.5	50	50	ENSMUST00000238926.2	ENSMUSG00000042641.20	Rgsl1	chr1	protein_coding	regulator of G-protein signaling like 1
chr1	153688062	153689498	-	153688062	153693250	A5SS	0.5	50	50	ENSMUST00000238926.2	ENSMUSG00000042641.20	Rgsl1	chr1	protein_coding	regulator of G-protein signaling like 1
chr1	153666084	153669834	-	153666084	153666332	5pMXE	0.33	50	50	ENSMUST00000145308.8	ENSMUSG00000042641.20	Rgsl1	chr1	protein_coding	regulator of G-protein signaling like 1
chr1	153666084	153669834	-	153669625	153669834	3pMXE	0.5	50	50	ENSMUST00000134030.8	ENSMUSG00000042641.20	Rgsl1	chr1	protein_coding	regulator of G-protein signaling like 1
chr1	153693357	153698055	-	153693357	153697097	5pMXE	0.5	50	50	ENSMUST00000134030.8	ENSMUSG00000042641.20	Rgsl1	chr1	protein_coding	regulator of G-protein signaling like 1
chr1	153776423	153778680	+	153775805	153778680	A5SS	0.33	50	50	ENSMUST00000086199.12	ENSMUSG00000026473.17	Glul	chr1	protein_coding	glutamate-ammonia ligase (glutamine synthetase)
chr1	153776891	153778680	+	153775805	153778680	A5SS	0.33	50	50	ENSMUST00000086199.12	ENSMUSG00000026473.17	Glul	chr1	protein_coding	glutamate-ammonia ligase (glutamine synthetase)
chr1	153779666	153780283	+	153778858	153780283	A5SS	0.5	50	50	ENSMUST00000086199.12	ENSMUSG00000026473.17	Glul	chr1	protein_coding	glutamate-ammonia ligase (glutamine synthetase)
chr1	153776423	153778680	+	153776891	153778680	A5SS	0.33	50	50	ENSMUST00000140685.4	ENSMUSG00000026473.17	Glul	chr1	protein_coding	glutamate-ammonia ligase (glutamine synthetase)
chr1	153879698	153881189	-	153879698	153881879	A5SS	0.5	50	50	ENSMUST00000188927.2	ENSMUSG00000101903.2	Gm29291	chr1	lncRNA	predicted gene 29291
chr1	153988075	153993186	-	153988075	153991770	5pMXE	0.5	50	50	ENSMUST00000185465.7	ENSMUSG00000100627.7	A830008E24Rik	chr1	lncRNA	RIKEN cDNA A830008E24 gene
chr1	153953898	153987942	-	153913623	153987942	A3SS	0.5	50	50	ENSMUST00000185465.7	ENSMUSG00000100627.7	A830008E24Rik	chr1	lncRNA	RIKEN cDNA A830008E24 gene
chr1	154133053	154138800	+	154131507	154138800	A5SS	0.5	50	50	ENSMUST00000187189.7	ENSMUSG00000100221.7	4930532M18Rik	chr1	lncRNA	RIKEN cDNA 4930532M18 gene
chr1	154279604;154280759	154280631;154283458	-	154279604	154283458	cassetteExon	0.5	100	100	ENSMUST00000187541.7	ENSMUSG00000004110.18	Cacna1e	chr1	protein_coding	calcium channel, voltage-dependent, R type, alpha 1E subunit
chr1	154289827;154293792	154293696;154296774	-	154289827;154291903	154291807;154296774	MXE	0.5	100	100	ENSMUST00000187541.7	ENSMUSG00000004110.18	Cacna1e	chr1	protein_coding	calcium channel, voltage-dependent, R type, alpha 1E subunit
chr1	154324688;154327985	154327974;154341465	-	154324688;154326603	154326592;154341465	MXE	0.5	100	100	ENSMUST00000187541.7	ENSMUSG00000004110.18	Cacna1e	chr1	protein_coding	calcium channel, voltage-dependent, R type, alpha 1E subunit
chr1	154344854	154347091	-	154344854	154347084	A5SS	0.5	50	50	ENSMUST00000187541.7	ENSMUSG00000004110.18	Cacna1e	chr1	protein_coding	calcium channel, voltage-dependent, R type, alpha 1E subunit
chr1	154576256	154577021	-	154576256	154739625	A5SS	0.5	50	50	ENSMUST00000211821.2	ENSMUSG00000004110.18	Cacna1e	chr1	protein_coding	calcium channel, voltage-dependent, R type, alpha 1E subunit
chr1	154361521	154362244	-	154358369	154362244	A3SS	0.5	50	50	ENSMUST00000188965.7	ENSMUSG00000004110.18	Cacna1e	chr1	protein_coding	calcium channel, voltage-dependent, R type, alpha 1E subunit
chr1	154358369	154358821	-	154358369	154362244	A5SS	0.5	50	50	ENSMUST00000188965.7	ENSMUSG00000004110.18	Cacna1e	chr1	protein_coding	calcium channel, voltage-dependent, R type, alpha 1E subunit
chr1	154601666	154674994	-	154601666	154759690	A5SS	0.5	50	50	ENSMUST00000188321.2	ENSMUSG00000004110.18	Cacna1e	chr1	protein_coding	calcium channel, voltage-dependent, R type, alpha 1E subunit
chr1	155012596	155013260	-	155012596	155013445	A5SS	0.33	50	50	ENSMUST00000194612.6	ENSMUSG00000026471.15	Mr1	chr1	protein_coding	major histocompatibility complex, class I-related
chr1	155012596	155013340	-	155012596	155013445	A5SS	0.33	50	50	ENSMUST00000194612.6	ENSMUSG00000026471.15	Mr1	chr1	protein_coding	major histocompatibility complex, class I-related
chr1	155012596	155013340	-	155012596	155013260	A5SS	0.33	50	50	ENSMUST00000027744.10	ENSMUSG00000026471.15	Mr1	chr1	protein_coding	major histocompatibility complex, class I-related
chr1	155073181	155082968	+	155073181	155077686	3pMXE	0.33	50	50	ENSMUST00000027743.13	ENSMUSG00000026470.15	Stx6	chr1	protein_coding	syntaxin 6
chr1	155053694;155057101	155056930;155063524	+	155053694	155063524	cassetteExon	0.5	100	100	ENSMUST00000027743.13	ENSMUSG00000026470.15	Stx6	chr1	protein_coding	syntaxin 6
chr1	155073181	155073883	+	155073181	155077686	A3SS	0.33	50	50	ENSMUST00000027743.13	ENSMUSG00000026470.15	Stx6	chr1	protein_coding	syntaxin 6
chr1	155069135	155073087	+	155069071	155073087	A5SS	0.33	50	50	ENSMUST00000027743.13	ENSMUSG00000026470.15	Stx6	chr1	protein_coding	syntaxin 6
chr1	155071074	155073087	+	155069071	155073087	A5SS	0.33	50	50	ENSMUST00000027743.13	ENSMUSG00000026470.15	Stx6	chr1	protein_coding	syntaxin 6
chr1	155071074	155073087	+	155069135	155073087	A5SS	0.33	50	50	ENSMUST00000193059.6	ENSMUSG00000026470.15	Stx6	chr1	protein_coding	syntaxin 6
chr1	155073181	155082968	+	155073181	155073883	3pMXE	0.33	50	50	ENSMUST00000195302.6	ENSMUSG00000026470.15	Stx6	chr1	protein_coding	syntaxin 6
chr1	155097333	155100657	-	155097333;155099177	155099021;155100657	ES	0.33	50	50	ENSMUST00000186156.7	ENSMUSG00000033722.10	BC034090	chr1	protein_coding	cDNA sequence BC034090
chr1	155102194	155105565	-	155102194	155108192	A5SS	0.5	50	50	ENSMUST00000186156.7	ENSMUSG00000033722.10	BC034090	chr1	protein_coding	cDNA sequence BC034090
chr1	155108335	155108626	-	155108335	155116482	A5SS	0.33	50	50	ENSMUST00000186156.7	ENSMUSG00000033722.10	BC034090	chr1	protein_coding	cDNA sequence BC034090
chr1	155108335	155116492	-	155108335	155116482	A5SS	0.33	50	50	ENSMUST00000186156.7	ENSMUSG00000033722.10	BC034090	chr1	protein_coding	cDNA sequence BC034090
chr1	155094133;155097333	155097081;155100657	-	155094133	155100657	cassetteExon	0.5	100	100	ENSMUST00000190976.2	ENSMUSG00000033722.10	BC034090	chr1	protein_coding	cDNA sequence BC034090
chr1	155099177	155100657	-	155094133	155100657	A3SS	0.33	50	50	ENSMUST00000190976.2	ENSMUSG00000033722.10	BC034090	chr1	protein_coding	cDNA sequence BC034090
chr1	155108335	155116492	-	155108335	155108626	5pMXE	0.33	50	50	ENSMUST00000187096.2	ENSMUSG00000033722.10	BC034090	chr1	protein_coding	cDNA sequence BC034090
chr1	155169021	155184697	-	155169021;155183562	155183368;155184697	ES	0.5	50	50	ENSMUST00000027741.12	ENSMUSG00000026469.15	Xpr1	chr1	protein_coding	xenotropic and polytropic retrovirus receptor 1
chr1	155208132;155216143	155216039;155221299	-	155208132	155221299	cassetteExon	0.5	100	100	ENSMUST00000027741.12	ENSMUSG00000026469.15	Xpr1	chr1	protein_coding	xenotropic and polytropic retrovirus receptor 1
chr1	155260166	155260357	-	155221400	155260357	A3SS	0.5	50	50	ENSMUST00000027741.12	ENSMUSG00000026469.15	Xpr1	chr1	protein_coding	xenotropic and polytropic retrovirus receptor 1
chr1	155401180	155402772	-	155397583	155402772	A3SS	0.5	50	50	ENSMUST00000097531.3	ENSMUSG00000073535.6	Gm5532	chr1	lncRNA	predicted gene 5532
chr1	155443427	155463186	+	155443427	155447944	3pMXE	0.33	50	50	ENSMUST00000080138.13	ENSMUSG00000033701.14	Acbd6	chr1	protein_coding	acyl-Coenzyme A binding domain containing 6
chr1	155443427	155477200	+	155443427	155447944	3pMXE	0.33	50	50	ENSMUST00000080138.13	ENSMUSG00000033701.14	Acbd6	chr1	protein_coding	acyl-Coenzyme A binding domain containing 6
chr1	155438934	155440403	+	155434605	155440403	A5SS	0.5	50	50	ENSMUST00000080138.13	ENSMUSG00000033701.14	Acbd6	chr1	protein_coding	acyl-Coenzyme A binding domain containing 6
chr1	155443427	155463186	+	155443427	155477200	A3SS	0.33	50	50	ENSMUST00000035560.9	ENSMUSG00000033701.14	Acbd6	chr1	protein_coding	acyl-Coenzyme A binding domain containing 6
chr1	155600707	155627281	-	155600707	155617548	5pMXE	0.5	50	50	ENSMUST00000027740.14	ENSMUSG00000026468.15	Lhx4	chr1	protein_coding	LIM homeobox protein 4
chr1	155657200	155657577	-	155657200	155658271	A5SS	0.5	50	50	ENSMUST00000035325.15	ENSMUSG00000033684.15	Qsox1	chr1	protein_coding	quiescin Q6 sulfhydryl oxidase 1
chr1	155654597	155655464	-	155654597	155655185	A5SS	0.5	50	50	ENSMUST00000111764.8	ENSMUSG00000033684.15	Qsox1	chr1	protein_coding	quiescin Q6 sulfhydryl oxidase 1
chr1	155744553	155751068	-	155744553;155747815	155747655;155751068	ES	0.5	50	50	ENSMUST00000138762.8	ENSMUSG00000033671.19	Cep350	chr1	protein_coding	centrosomal protein 350
chr1	155835577	155838221	-	155835577;155836933	155836890;155838221	ES	0.5	50	50	ENSMUST00000138762.8	ENSMUSG00000033671.19	Cep350	chr1	protein_coding	centrosomal protein 350
chr1	155761852;155763004	155762882;155770340	-	155761852	155770340	cassetteExon	0.5	100	100	ENSMUST00000138762.8	ENSMUSG00000033671.19	Cep350	chr1	protein_coding	centrosomal protein 350
chr1	155736586	155736901	-	155736586	155737394	A5SS	0.5	50	50	ENSMUST00000138762.8	ENSMUSG00000033671.19	Cep350	chr1	protein_coding	centrosomal protein 350
chr1	155909546	155911504	-	155909546	155910427	5pMXE	0.5	50	50	ENSMUST00000169241.8	ENSMUSG00000026466.17	Tor1aip1	chr1	protein_coding	torsin A interacting protein 1
chr1	155894005;155895769	155895714;155898046	-	155894005	155898046	cassetteExon	0.5	100	100	ENSMUST00000169241.8	ENSMUSG00000026466.17	Tor1aip1	chr1	protein_coding	torsin A interacting protein 1
chr1	155894276	155898046	-	155894005	155898046	A3SS	0.25	50	50	ENSMUST00000169241.8	ENSMUSG00000026466.17	Tor1aip1	chr1	protein_coding	torsin A interacting protein 1
chr1	155907219	155908652	-	155907219	155909472	A5SS	0.5	50	50	ENSMUST00000169241.8	ENSMUSG00000026466.17	Tor1aip1	chr1	protein_coding	torsin A interacting protein 1
chr1	155909585	155911504	-	155909546	155911504	A3SS	0.5	50	50	ENSMUST00000097527.10	ENSMUSG00000026466.17	Tor1aip1	chr1	protein_coding	torsin A interacting protein 1
chr1	155894276	155898046	-	155895769	155898046	A3SS&ES	0.25	50	50	ENSMUST00000136331.8	ENSMUSG00000026466.17	Tor1aip1	chr1	protein_coding	torsin A interacting protein 1
chr1	155894005	155898046	-	155883455	155898046	A3SS	0.25	50	50	ENSMUST00000027738.14	ENSMUSG00000026466.17	Tor1aip1	chr1	protein_coding	torsin A interacting protein 1
chr1	155894276	155898046	-	155883455	155898046	A3SS	0.25	50	50	ENSMUST00000027738.14	ENSMUSG00000026466.17	Tor1aip1	chr1	protein_coding	torsin A interacting protein 1
chr1	155895769	155898046	-	155883455	155898046	A3SS	0.25	50	50	ENSMUST00000027738.14	ENSMUSG00000026466.17	Tor1aip1	chr1	protein_coding	torsin A interacting protein 1
chr1	155883455	155889064	-	155883455	155898046	A5SS	0.5	50	50	ENSMUST00000027738.14	ENSMUSG00000026466.17	Tor1aip1	chr1	protein_coding	torsin A interacting protein 1
chr1	155911666	155916821	+	155911854	155916821	A5SS	0.25	50	50	ENSMUST00000111757.10	ENSMUSG00000050565.17	Tor1aip2	chr1	protein_coding	torsin A interacting protein 2
chr1	155911837	155935157	+	155927369	155935157	A5SS&ES	0.33	50	50	ENSMUST00000111757.10	ENSMUSG00000050565.17	Tor1aip2	chr1	protein_coding	torsin A interacting protein 2
chr1	155912300	155916821	+	155911854	155916821	A5SS	0.25	50	50	ENSMUST00000111757.10	ENSMUSG00000050565.17	Tor1aip2	chr1	protein_coding	torsin A interacting protein 2
chr1	155916748	155916821	+	155911854	155916821	A5SS	0.25	50	50	ENSMUST00000111757.10	ENSMUSG00000050565.17	Tor1aip2	chr1	protein_coding	torsin A interacting protein 2
chr1	155916748	155927040	+	155916880	155927040	A5SS&ES	0.5	50	50	ENSMUST00000111757.10	ENSMUSG00000050565.17	Tor1aip2	chr1	protein_coding	torsin A interacting protein 2
chr1	155916748	155935157	+	155927369	155935157	A5SS&ES	0.33	50	50	ENSMUST00000111757.10	ENSMUSG00000050565.17	Tor1aip2	chr1	protein_coding	torsin A interacting protein 2
chr1	155912300	155916821	+	155911666	155916821	A5SS	0.25	50	50	ENSMUST00000111754.9	ENSMUSG00000050565.17	Tor1aip2	chr1	protein_coding	torsin A interacting protein 2
chr1	155916748	155916821	+	155911666	155916821	A5SS	0.25	50	50	ENSMUST00000111754.9	ENSMUSG00000050565.17	Tor1aip2	chr1	protein_coding	torsin A interacting protein 2
chr1	155916748	155935157	+	155911837	155935157	A5SS	0.33	50	50	ENSMUST00000133152.2	ENSMUSG00000050565.17	Tor1aip2	chr1	protein_coding	torsin A interacting protein 2
chr1	155916748	155916821	+	155912300	155916821	A5SS	0.25	50	50	ENSMUST00000128941.8	ENSMUSG00000050565.17	Tor1aip2	chr1	protein_coding	torsin A interacting protein 2
chr1	155916748;155927369	155927040;155935157	+	155916748	155935157	cassetteExon	0.5	100	100	ENSMUST00000060404.5	ENSMUSG00000050565.17	Tor1aip2	chr1	protein_coding	torsin A interacting protein 2
chr1	155916748	155916821	+	155916748	155935157	A3SS	0.33	50	50	ENSMUST00000060404.5	ENSMUSG00000050565.17	Tor1aip2	chr1	protein_coding	torsin A interacting protein 2
chr1	155916748	155935157	+	155916748	155927040	3pMXE	0.33	50	50	ENSMUST00000065648.15	ENSMUSG00000050565.17	Tor1aip2	chr1	protein_coding	torsin A interacting protein 2
chr1	155916748;155916880	155916821;155927040	+	155916748	155927040	cassetteExon	0.5	100	100	ENSMUST00000065648.15	ENSMUSG00000050565.17	Tor1aip2	chr1	protein_coding	torsin A interacting protein 2
chr1	156087505	156090976	-	156087505;156090542	156090399;156090976	ES	0.5	50	50	ENSMUST00000121146.10	ENSMUSG00000060985.16	Tdrd5	chr1	protein_coding	tudor domain containing 5
chr1	156128360	156129315	-	156128360	156129084	A5SS	0.5	50	50	ENSMUST00000121146.10	ENSMUSG00000060985.16	Tdrd5	chr1	protein_coding	tudor domain containing 5
chr1	156130172	156131148	-	156130172	156130881	A5SS	0.5	50	50	ENSMUST00000121146.10	ENSMUSG00000060985.16	Tdrd5	chr1	protein_coding	tudor domain containing 5
chr1	156128306	156129315	-	156128360	156129315	A3SS	0.5	50	50	ENSMUST00000167528.9	ENSMUSG00000060985.16	Tdrd5	chr1	protein_coding	tudor domain containing 5
chr1	156148657	156151307	+	156148657	156153430	A3SS	0.5	50	50	ENSMUST00000193020.2	ENSMUSG00000026602.10	Nphs2	chr1	protein_coding	nephrosis 2, podocin
chr1	156152585	156153430	+	156148657	156153430	A5SS	0.5	50	50	ENSMUST00000193020.2	ENSMUSG00000026602.10	Nphs2	chr1	protein_coding	nephrosis 2, podocin
chr1	156208513	156215561	-	156208513;156210047	156209946;156215561	ES	0.5	50	50	ENSMUST00000177824.8	ENSMUSG00000026601.15	Axdnd1	chr1	protein_coding	axonemal dynein light chain domain containing 1
chr1	156163014;156169464	156169354;156174266	-	156163014	156174266	cassetteExon	0.5	100	100	ENSMUST00000177824.8	ENSMUSG00000026601.15	Axdnd1	chr1	protein_coding	axonemal dynein light chain domain containing 1
chr1	156158280	156159057	-	156151326	156159057	A3SS	0.5	50	50	ENSMUST00000177824.8	ENSMUSG00000026601.15	Axdnd1	chr1	protein_coding	axonemal dynein light chain domain containing 1
chr1	156183595	156193186	-	156179021	156193186	A3SS	0.5	50	50	ENSMUST00000177824.8	ENSMUSG00000026601.15	Axdnd1	chr1	protein_coding	axonemal dynein light chain domain containing 1
chr1	156220449	156223002	-	156220359	156223002	A3SS	0.5	50	50	ENSMUST00000177824.8	ENSMUSG00000026601.15	Axdnd1	chr1	protein_coding	axonemal dynein light chain domain containing 1
chr1	156163014	156166315	-	156163014	156174266	A5SS	0.33	50	50	ENSMUST00000177824.8	ENSMUSG00000026601.15	Axdnd1	chr1	protein_coding	axonemal dynein light chain domain containing 1
chr1	156226118	156227420	-	156226118	156227752	A5SS	0.5	50	50	ENSMUST00000177824.8	ENSMUSG00000026601.15	Axdnd1	chr1	protein_coding	axonemal dynein light chain domain containing 1
chr1	156163014;156166647	156166315;156169354	-	156163014	156169354	cassetteExon	0.5	100	100	ENSMUST00000178036.8	ENSMUSG00000026601.15	Axdnd1	chr1	protein_coding	axonemal dynein light chain domain containing 1
chr1	156248100	156248412	-	156248100	156248429	A5SS	0.33	50	50	ENSMUST00000178036.8	ENSMUSG00000026601.15	Axdnd1	chr1	protein_coding	axonemal dynein light chain domain containing 1
chr1	156248100	156248416	-	156248100	156248429	A5SS	0.33	50	50	ENSMUST00000178036.8	ENSMUSG00000026601.15	Axdnd1	chr1	protein_coding	axonemal dynein light chain domain containing 1
chr1	156166647	156168331	-	156166647	156169354	A5SS	0.33	50	50	ENSMUST00000213088.2	ENSMUSG00000026601.15	Axdnd1	chr1	protein_coding	axonemal dynein light chain domain containing 1
chr1	156166647	156168479	-	156166647	156169354	A5SS	0.33	50	50	ENSMUST00000213088.2	ENSMUSG00000026601.15	Axdnd1	chr1	protein_coding	axonemal dynein light chain domain containing 1
chr1	156166647	156168479	-	156166647	156168331	A5SS	0.33	50	50	ENSMUST00000212747.2	ENSMUSG00000026601.15	Axdnd1	chr1	protein_coding	axonemal dynein light chain domain containing 1
chr1	156248100	156248416	-	156248100	156248412	A5SS	0.33	50	50	ENSMUST00000179985.8	ENSMUSG00000026601.15	Axdnd1	chr1	protein_coding	axonemal dynein light chain domain containing 1
chr1	156285574	156301718	-	156285574;156294368	156294251;156301718	ES	0.5	50	50	ENSMUST00000189661.7	ENSMUSG00000026600.13	Soat1	chr1	protein_coding	sterol O-acyltransferase 1
chr1	156285574	156294228	-	156285574	156294251	A5SS	0.33	50	50	ENSMUST00000189661.7	ENSMUSG00000026600.13	Soat1	chr1	protein_coding	sterol O-acyltransferase 1
chr1	156285574	156301718	-	156285574	156294251	5pMXE	0.33	50	50	ENSMUST00000051396.13	ENSMUSG00000026600.13	Soat1	chr1	protein_coding	sterol O-acyltransferase 1
chr1	156285574;156294368	156294228;156301718	-	156285574	156301718	cassetteExon	0.5	100	100	ENSMUST00000187507.7	ENSMUSG00000026600.13	Soat1	chr1	protein_coding	sterol O-acyltransferase 1
chr1	156386775;156448471	156448409;156450055	+	156386775	156450055	cassetteExon	0.5	100	100	ENSMUST00000173929.8	ENSMUSG00000026596.14	Abl2	chr1	protein_coding	v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)
chr1	156443628	156448409	+	156386775	156448409	A5SS	0.5	50	50	ENSMUST00000166172.9	ENSMUSG00000026596.14	Abl2	chr1	protein_coding	v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)
chr1	156494347;156496753	156496684;156496941	-	156494347	156496941	cassetteExon	0.5	100	100	ENSMUST00000156861.8	ENSMUSG00000060519.12	Tor3a	chr1	protein_coding	torsin family 3, member A
chr1	156488650	156494169	-	156484166	156494169	A3SS	0.5	50	50	ENSMUST00000156861.8	ENSMUSG00000060519.12	Tor3a	chr1	protein_coding	torsin family 3, member A
chr1	156484166	156485935	-	156484166	156494169	A5SS	0.5	50	50	ENSMUST00000156861.8	ENSMUSG00000060519.12	Tor3a	chr1	protein_coding	torsin family 3, member A
chr1	156494347	156501100	-	156494347	156496941	A5SS&ES	0.33	50	50	ENSMUST00000156861.8	ENSMUSG00000060519.12	Tor3a	chr1	protein_coding	torsin family 3, member A
chr1	156497206	156501100	-	156497206	156500809	A5SS	0.5	50	50	ENSMUST00000156861.8	ENSMUSG00000060519.12	Tor3a	chr1	protein_coding	torsin family 3, member A
chr1	156494347	156501100	-	156494347;156497206	156496941;156501100	ES	0.5	50	50	ENSMUST00000079625.11	ENSMUSG00000060519.12	Tor3a	chr1	protein_coding	torsin family 3, member A
chr1	156494347	156496684	-	156494347	156501100	A5SS	0.33	50	50	ENSMUST00000190607.2	ENSMUSG00000060519.12	Tor3a	chr1	protein_coding	torsin family 3, member A
chr1	156533737	156546436	-	156533737;156544550	156544458;156546436	ES	0.5	50	50	ENSMUST00000122424.8	ENSMUSG00000033557.18	Fam20b	chr1	protein_coding	FAM20B, glycosaminoglycan xylosylkinase
chr1	156526406	156529967	-	156526406	156529969	A5SS	0.5	50	50	ENSMUST00000122424.8	ENSMUSG00000033557.18	Fam20b	chr1	protein_coding	FAM20B, glycosaminoglycan xylosylkinase
chr1	156530055	156530808	-	156530055	156533238	A5SS	0.5	50	50	ENSMUST00000122424.8	ENSMUSG00000033557.18	Fam20b	chr1	protein_coding	FAM20B, glycosaminoglycan xylosylkinase
chr1	156533737	156546436	-	156533737	156544458	5pMXE	0.5	50	50	ENSMUST00000147931.2	ENSMUSG00000033557.18	Fam20b	chr1	protein_coding	FAM20B, glycosaminoglycan xylosylkinase
chr1	156647488	156651561	-	156647488;156649034	156648957;156651561	ES	0.5	50	50	ENSMUST00000172057.8	ENSMUSG00000026594.15	Ralgps2	chr1	protein_coding	Ral GEF with PH domain and SH3 binding motif 2
chr1	156715600;156720582	156720478;156728156	-	156715600	156728156	cassetteExon	0.5	100	100	ENSMUST00000172057.8	ENSMUSG00000026594.15	Ralgps2	chr1	protein_coding	Ral GEF with PH domain and SH3 binding motif 2
chr1	156728206;156729460	156729356;156735209	-	156728206	156735209	cassetteExon	0.5	100	100	ENSMUST00000172057.8	ENSMUSG00000026594.15	Ralgps2	chr1	protein_coding	Ral GEF with PH domain and SH3 binding motif 2
chr1	156735288	156767059	-	156735348	156767059	A3SS	0.5	50	50	ENSMUST00000172057.8	ENSMUSG00000026594.15	Ralgps2	chr1	protein_coding	Ral GEF with PH domain and SH3 binding motif 2
chr1	156735348	156766300	-	156735348	156767059	A5SS	0.25	50	50	ENSMUST00000172057.8	ENSMUSG00000026594.15	Ralgps2	chr1	protein_coding	Ral GEF with PH domain and SH3 binding motif 2
chr1	156735348	156766502	-	156735348	156767059	A5SS	0.25	50	50	ENSMUST00000172057.8	ENSMUSG00000026594.15	Ralgps2	chr1	protein_coding	Ral GEF with PH domain and SH3 binding motif 2
chr1	156735348	156766922	-	156735348	156767059	A5SS	0.25	50	50	ENSMUST00000172057.8	ENSMUSG00000026594.15	Ralgps2	chr1	protein_coding	Ral GEF with PH domain and SH3 binding motif 2
chr1	156735348	156766300	-	156735348	156766922	A5SS	0.25	50	50	ENSMUST00000171292.8	ENSMUSG00000026594.15	Ralgps2	chr1	protein_coding	Ral GEF with PH domain and SH3 binding motif 2
chr1	156735348	156766502	-	156735348	156766922	A5SS	0.25	50	50	ENSMUST00000171292.8	ENSMUSG00000026594.15	Ralgps2	chr1	protein_coding	Ral GEF with PH domain and SH3 binding motif 2
chr1	156735288	156766300	-	156735288	156767059	A5SS	0.5	50	50	ENSMUST00000191605.7	ENSMUSG00000026594.15	Ralgps2	chr1	protein_coding	Ral GEF with PH domain and SH3 binding motif 2
chr1	156735348	156766300	-	156735288	156766300	A3SS	0.5	50	50	ENSMUST00000188656.7	ENSMUSG00000026594.15	Ralgps2	chr1	protein_coding	Ral GEF with PH domain and SH3 binding motif 2
chr1	156735348	156766300	-	156735348	156766502	A5SS	0.25	50	50	ENSMUST00000190762.7	ENSMUSG00000026594.15	Ralgps2	chr1	protein_coding	Ral GEF with PH domain and SH3 binding motif 2
chr1	156935457	156936223	-	156935457	156936101	5pMXE	0.25	50	50	ENSMUST00000118207.8	ENSMUSG00000026592.14	Tex35	chr1	protein_coding	testis expressed 35
chr1	156926973	156927274	-	156926976	156927274	A3SS	0.5	50	50	ENSMUST00000118207.8	ENSMUSG00000026592.14	Tex35	chr1	protein_coding	testis expressed 35
chr1	156926973	156927650	-	156927317	156927650	A3SS&ES	0.5	50	50	ENSMUST00000118207.8	ENSMUSG00000026592.14	Tex35	chr1	protein_coding	testis expressed 35
chr1	156935457	156935895	-	156935457	156936101	A5SS	0.25	50	50	ENSMUST00000118207.8	ENSMUSG00000026592.14	Tex35	chr1	protein_coding	testis expressed 35
chr1	156935457	156936012	-	156935457	156936101	A5SS	0.25	50	50	ENSMUST00000118207.8	ENSMUSG00000026592.14	Tex35	chr1	protein_coding	testis expressed 35
chr1	156926973	156927650	-	156926973;156927317	156927274;156927650	ES	0.5	50	50	ENSMUST00000027884.13	ENSMUSG00000026592.14	Tex35	chr1	protein_coding	testis expressed 35
chr1	156935457	156935895	-	156935457	156936223	A5SS	0.25	50	50	ENSMUST00000121911.8	ENSMUSG00000026592.14	Tex35	chr1	protein_coding	testis expressed 35
chr1	156935457	156936012	-	156935457	156936223	A5SS	0.25	50	50	ENSMUST00000121911.8	ENSMUSG00000026592.14	Tex35	chr1	protein_coding	testis expressed 35
chr1	156935457	156936012	-	156935457	156935895	5pMXE	0.25	50	50	ENSMUST00000119526.2	ENSMUSG00000026592.14	Tex35	chr1	protein_coding	testis expressed 35
chr1	156986407	156988695	-	156986428	156988695	A3SS	0.5	50	50	ENSMUST00000078308.13	ENSMUSG00000070565.12	Rasal2	chr1	protein_coding	RAS protein activator like 2
chr1	157006822	157008444	-	157006822	157020317	A5SS	0.5	50	50	ENSMUST00000078308.13	ENSMUSG00000070565.12	Rasal2	chr1	protein_coding	RAS protein activator like 2
chr1	157057715	157058479	-	157057715	157114301	A5SS	0.25	50	50	ENSMUST00000078308.13	ENSMUSG00000070565.12	Rasal2	chr1	protein_coding	RAS protein activator like 2
chr1	157057715	157071091	-	157057715	157114301	A5SS	0.25	50	50	ENSMUST00000078308.13	ENSMUSG00000070565.12	Rasal2	chr1	protein_coding	RAS protein activator like 2
chr1	157057715	157084128	-	157057715	157114301	A5SS	0.25	50	50	ENSMUST00000078308.13	ENSMUSG00000070565.12	Rasal2	chr1	protein_coding	RAS protein activator like 2
chr1	157057715	157084128	-	157057715	157071091	5pMXE	0.25	50	50	ENSMUST00000129880.8	ENSMUSG00000070565.12	Rasal2	chr1	protein_coding	RAS protein activator like 2
chr1	157057715	157058479	-	157057715	157071091	A5SS	0.25	50	50	ENSMUST00000129880.8	ENSMUSG00000070565.12	Rasal2	chr1	protein_coding	RAS protein activator like 2
chr1	157057715	157058479	-	157057715	157084128	A5SS	0.25	50	50	ENSMUST00000134543.8	ENSMUSG00000070565.12	Rasal2	chr1	protein_coding	RAS protein activator like 2
chr1	157241365;157246874	157246805;157247439	+	157241365	157247439	cassetteExon	0.5	100	100	ENSMUST00000061537.12	ENSMUSG00000049881.14	2810025M15Rik	chr1	transcribed_processed_pseudogene	RIKEN cDNA 2810025M15 gene
chr1	157240261	157241314	+	157240695	157241314	A5SS	0.5	50	50	ENSMUST00000061537.12	ENSMUSG00000049881.14	2810025M15Rik	chr1	transcribed_processed_pseudogene	RIKEN cDNA 2810025M15 gene
chr1	157289619	157292535	+	157289619;157292037	157291979;157292535	ES	0.5	50	50	ENSMUST00000193791.6	ENSMUSG00000033488.12	Cryzl2	chr1	protein_coding	crystallin zeta like 2
chr1	157293391	157316013	+	157293391;157294817	157294736;157316013	ES	0.33	50	50	ENSMUST00000193791.6	ENSMUSG00000033488.12	Cryzl2	chr1	protein_coding	crystallin zeta like 2
chr1	157294817	157298186	+	157294817	157316013	A3SS	0.5	50	50	ENSMUST00000193791.6	ENSMUSG00000033488.12	Cryzl2	chr1	protein_coding	crystallin zeta like 2
chr1	157299986	157316013	+	157294817	157316013	A5SS	0.33	50	50	ENSMUST00000193791.6	ENSMUSG00000033488.12	Cryzl2	chr1	protein_coding	crystallin zeta like 2
chr1	157299986	157316013	+	157293391	157316013	A5SS	0.33	50	50	ENSMUST00000119891.7	ENSMUSG00000033488.12	Cryzl2	chr1	protein_coding	crystallin zeta like 2
chr1	157334430	157352355	+	157334430;157335123	157334956;157352355	ES	0.5	50	50	ENSMUST00000086130.9	ENSMUSG00000026589.15	Sec16b	chr1	protein_coding	SEC16 homolog B (S. cerevisiae)
chr1	157353794	157356734	+	157352423	157356734	A5SS	0.5	50	50	ENSMUST00000086130.9	ENSMUSG00000026589.15	Sec16b	chr1	protein_coding	SEC16 homolog B (S. cerevisiae)
chr1	158123340	158123837	-	158123340	158183087	A5SS	0.5	50	50	ENSMUST00000195271.5	ENSMUSG00000004031.14	Brinp2	chr1	protein_coding	bone morphogenic protein/retinoic acid inducible neural-specific 2
chr1	158484878;158490017	158489876;158491565	+	158484878	158491565	cassetteExon	0.5	100	100	ENSMUST00000193042.6	ENSMUSG00000026587.16	Astn1	chr1	protein_coding	astrotactin 1
chr1	158502250;158506968	158506917;158511647	+	158502250	158511647	cassetteExon	0.5	100	100	ENSMUST00000193042.6	ENSMUSG00000026587.16	Astn1	chr1	protein_coding	astrotactin 1
chr1	158348098	158348243	+	158348098	158400522	A3SS	0.5	50	50	ENSMUST00000193042.6	ENSMUSG00000026587.16	Astn1	chr1	protein_coding	astrotactin 1
chr1	158436925	158438411	+	158436925	158439916	A3SS	0.5	50	50	ENSMUST00000193042.6	ENSMUSG00000026587.16	Astn1	chr1	protein_coding	astrotactin 1
chr1	158338692	158348014	+	158338716	158348014	A5SS	0.5	50	50	ENSMUST00000193042.6	ENSMUSG00000026587.16	Astn1	chr1	protein_coding	astrotactin 1
chr1	158380561	158400522	+	158348098	158400522	A5SS	0.5	50	50	ENSMUST00000193042.6	ENSMUSG00000026587.16	Astn1	chr1	protein_coding	astrotactin 1
chr1	158502250	158511647	+	158502250	158506917	3pMXE	0.5	50	50	ENSMUST00000195311.6	ENSMUSG00000026587.16	Astn1	chr1	protein_coding	astrotactin 1
chr1	158502250	158511647	+	158506968	158511647	5pMXE	0.5	50	50	ENSMUST00000194658.2	ENSMUSG00000026587.16	Astn1	chr1	protein_coding	astrotactin 1
chr1	158615331;158631108	158631076;158641910	-	158615331	158641910	cassetteExon	0.5	100	100	ENSMUST00000159861.9	ENSMUSG00000073530.12	Pappa2	chr1	protein_coding	pappalysin 2
chr1	158656312	158660279	-	158642442	158660279	A3SS	0.5	50	50	ENSMUST00000159861.9	ENSMUSG00000073530.12	Pappa2	chr1	protein_coding	pappalysin 2
chr1	158785937	158807248	-	158785937	158787699	5pMXE	0.5	50	50	ENSMUST00000177789.2	ENSMUSG00000073530.12	Pappa2	chr1	protein_coding	pappalysin 2
chr1	158797435	158807248	-	158785937	158807248	A3SS	0.5	50	50	ENSMUST00000159892.2	ENSMUSG00000073530.12	Pappa2	chr1	protein_coding	pappalysin 2
chr1	158807404	158807525	-	158807404	158807881	A5SS	0.5	50	50	ENSMUST00000159892.2	ENSMUSG00000073530.12	Pappa2	chr1	protein_coding	pappalysin 2
chr1	159067191;159072256	159072159;159076772	+	159067191	159076772	cassetteExon	0.5	100	100	ENSMUST00000195800.6	ENSMUSG00000040782.13	Cop1	chr1	protein_coding	COP1, E3 ubiquitin ligase
chr1	159067191;159072410	159072159;159076772	+	159067191	159076772	cassetteExon	0.5	100	100	ENSMUST00000195800.6	ENSMUSG00000040782.13	Cop1	chr1	protein_coding	COP1, E3 ubiquitin ligase
chr1	159076848	159077593	+	159076836	159077593	A5SS	0.5	50	50	ENSMUST00000195800.6	ENSMUSG00000040782.13	Cop1	chr1	protein_coding	COP1, E3 ubiquitin ligase
chr1	159072256;159072410	159072370;159076772	+	159072256	159076772	cassetteExon	0.5	100	100	ENSMUST00000076894.11	ENSMUSG00000040782.13	Cop1	chr1	protein_coding	COP1, E3 ubiquitin ligase
chr1	159136534	159147318	+	159136534	159147294	A3SS	0.5	50	50	ENSMUST00000076894.11	ENSMUSG00000040782.13	Cop1	chr1	protein_coding	COP1, E3 ubiquitin ligase
chr1	159086312	159094327	+	159080186	159094327	A5SS	0.5	50	50	ENSMUST00000076894.11	ENSMUSG00000040782.13	Cop1	chr1	protein_coding	COP1, E3 ubiquitin ligase
chr1	159678115	159685747	+	159678115;159680003	159679527;159685747	ES	0.5	50	50	ENSMUST00000192069.6	ENSMUSG00000015829.14	Tnr	chr1	protein_coding	tenascin R
chr1	159601819	159677556	+	159565181	159677556	A5SS	0.5	50	50	ENSMUST00000192069.6	ENSMUSG00000015829.14	Tnr	chr1	protein_coding	tenascin R
chr1	159509314	159511637	+	159442677	159511637	A5SS	0.5	50	50	ENSMUST00000097514.8	ENSMUSG00000073528.8	Gm10530	chr1	lncRNA	predicted gene 10530
chr1	159872323	159898270	+	159872323;159897802	159897693;159898270	ES	0.33	50	50	ENSMUST00000168250.8	ENSMUSG00000090394.9	4930523C07Rik	chr1	protein_coding	RIKEN cDNA 4930523C07 gene
chr1	159898373	159902601	+	159898373	159898997	3pMXE	0.5	50	50	ENSMUST00000168250.8	ENSMUSG00000090394.9	4930523C07Rik	chr1	protein_coding	RIKEN cDNA 4930523C07 gene
chr1	159872323;159872595	159872503;159898270	+	159872323;159897802	159897693;159898270	MXE	0.5	100	100	ENSMUST00000168250.8	ENSMUSG00000090394.9	4930523C07Rik	chr1	protein_coding	RIKEN cDNA 4930523C07 gene
chr1	159872323;159872595	159872503;159898270	+	159872323	159898270	cassetteExon	0.5	100	100	ENSMUST00000163892.8	ENSMUSG00000090394.9	4930523C07Rik	chr1	protein_coding	RIKEN cDNA 4930523C07 gene
chr1	159905060	159905499	-	159905060	159905360	5pMXE	0.5	50	50	ENSMUST00000028061.9	ENSMUSG00000026729.10	4930562F07Rik	chr1	lncRNA	RIKEN cDNA 4930562F07 gene
chr1	159905047	159905360	-	159905060	159905360	A3SS	0.5	50	50	ENSMUST00000028061.9	ENSMUSG00000026729.10	4930562F07Rik	chr1	lncRNA	RIKEN cDNA 4930562F07 gene
chr1	159948331	159950225	-	159942324	159950225	A3SS	0.5	50	50	ENSMUST00000131919.2	ENSMUSG00000026725.18	Tnn	chr1	protein_coding	tenascin N
chr1	159942324	159943640	-	159942324	159950225	A5SS	0.5	50	50	ENSMUST00000131919.2	ENSMUSG00000026725.18	Tnn	chr1	protein_coding	tenascin N
chr1	160022881	160024516	+	160022881	160024491	A3SS	0.5	50	50	ENSMUST00000078878.14	ENSMUSG00000058267.14	Mrps14	chr1	protein_coding	mitochondrial ribosomal protein S14
chr1	160023115	160024516	+	160022881	160024516	A5SS	0.5	50	50	ENSMUST00000135680.8	ENSMUSG00000058267.14	Mrps14	chr1	protein_coding	mitochondrial ribosomal protein S14
chr1	160034279	160035958	-	160034279	160035949	A5SS	0.5	50	50	ENSMUST00000014370.11	ENSMUSG00000014226.11	Cacybp	chr1	protein_coding	calcyclin binding protein
chr1	160169734	160219752	-	160169734	160178791	5pMXE	0.5	50	50	ENSMUST00000028052.12	ENSMUSG00000026721.17	Rabgap1l	chr1	protein_coding	RAB GTPase activating protein 1-like
chr1	160084836	160085013	-	160075139	160085013	A3SS	0.5	50	50	ENSMUST00000028052.12	ENSMUSG00000026721.17	Rabgap1l	chr1	protein_coding	RAB GTPase activating protein 1-like
chr1	160075139	160078821	-	160075139	160085013	A5SS	0.5	50	50	ENSMUST00000028052.12	ENSMUSG00000026721.17	Rabgap1l	chr1	protein_coding	RAB GTPase activating protein 1-like
chr1	160085105	160114883	-	160085105	160169606	A5SS	0.33	50	50	ENSMUST00000028052.12	ENSMUSG00000026721.17	Rabgap1l	chr1	protein_coding	RAB GTPase activating protein 1-like
chr1	160085105	160134746	-	160085105	160169606	A5SS	0.33	50	50	ENSMUST00000028052.12	ENSMUSG00000026721.17	Rabgap1l	chr1	protein_coding	RAB GTPase activating protein 1-like
chr1	160118112	160134746	-	160085105	160134746	A3SS	0.5	50	50	ENSMUST00000193185.6	ENSMUSG00000026721.17	Rabgap1l	chr1	protein_coding	RAB GTPase activating protein 1-like
chr1	160085105	160114883	-	160085105	160134746	A5SS	0.33	50	50	ENSMUST00000193185.6	ENSMUSG00000026721.17	Rabgap1l	chr1	protein_coding	RAB GTPase activating protein 1-like
chr1	160568501	160620677	-	160568501	160620306	5pMXE	0.5	50	50	ENSMUST00000028049.13	ENSMUSG00000026721.17	Rabgap1l	chr1	protein_coding	RAB GTPase activating protein 1-like
chr1	160500271	160509611	-	160472971	160509611	A3SS	0.5	50	50	ENSMUST00000028049.13	ENSMUSG00000026721.17	Rabgap1l	chr1	protein_coding	RAB GTPase activating protein 1-like
chr1	160768564	160770098	+	160768564;160769609	160769495;160770098	ES	0.5	50	50	ENSMUST00000239200.2	ENSMUSG00000040423.12	Rc3h1	chr1	protein_coding	RING CCCH (C3H) domains 1
chr1	160791410	160792547	+	160791410	160792520	A3SS	0.5	50	50	ENSMUST00000239200.2	ENSMUSG00000040423.12	Rc3h1	chr1	protein_coding	RING CCCH (C3H) domains 1
chr1	160806285;160812420	160812367;160816949	+	160806285	160816949	cassetteExon	0.5	100	100	ENSMUST00000195438.6	ENSMUSG00000026715.13	Serpinc1	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1
chr1	160806285;160815153	160815011;160816949	+	160806285	160816949	cassetteExon	0.5	100	100	ENSMUST00000195438.6	ENSMUSG00000026715.13	Serpinc1	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1
chr1	160806285;160815153	160815102;160816949	+	160806285	160816949	cassetteExon	0.5	100	100	ENSMUST00000195438.6	ENSMUSG00000026715.13	Serpinc1	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1
chr1	160806285;160812420	160812367;160815011	+	160806285	160815011	cassetteExon	0.5	100	100	ENSMUST00000064725.11	ENSMUSG00000026715.13	Serpinc1	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1
chr1	160806285;160812420	160812367;160816949	+	160806285;160815153	160815011;160816949	MXE	0.5	100	100	ENSMUST00000064725.11	ENSMUSG00000026715.13	Serpinc1	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1
chr1	160806285	160815102	+	160806285	160815011	A3SS	0.25	50	50	ENSMUST00000064725.11	ENSMUSG00000026715.13	Serpinc1	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1
chr1	160806285;160815153	160815102;160816949	+	160806285;160812420	160812367;160816949	MXE	0.5	100	100	ENSMUST00000191936.2	ENSMUSG00000026715.13	Serpinc1	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1
chr1	160812420;160815153	160815011;160816949	+	160812420	160816949	cassetteExon	0.5	100	100	ENSMUST00000191936.2	ENSMUSG00000026715.13	Serpinc1	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1
chr1	160806285	160815011	+	160812420	160815011	5pMXE	0.5	50	50	ENSMUST00000194592.2	ENSMUSG00000026715.13	Serpinc1	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1
chr1	160806285	160816949	+	160815153	160816949	5pMXE	0.33	50	50	ENSMUST00000194777.2	ENSMUSG00000026715.13	Serpinc1	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1
chr1	160812420	160816949	+	160815153	160816949	5pMXE	0.33	50	50	ENSMUST00000194777.2	ENSMUSG00000026715.13	Serpinc1	chr1	protein_coding	serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1
chr1	160847976	160859375	-	160847976;160857311	160857212;160859375	ES	0.5	50	50	ENSMUST00000162226.9	ENSMUSG00000043467.20	Zbtb37	chr1	protein_coding	zinc finger and BTB domain containing 37
chr1	160860331	160861658	-	160860334	160861658	A3SS	0.5	50	50	ENSMUST00000162226.9	ENSMUSG00000043467.20	Zbtb37	chr1	protein_coding	zinc finger and BTB domain containing 37
chr1	160860331	160862348	-	160861854	160862348	A3SS&ES	0.5	50	50	ENSMUST00000162226.9	ENSMUSG00000043467.20	Zbtb37	chr1	protein_coding	zinc finger and BTB domain containing 37
chr1	160837061	160847054	-	160837061;160840591	160840455;160847054	ES	0.5	50	50	ENSMUST00000163079.9	ENSMUSG00000043467.20	Zbtb37	chr1	protein_coding	zinc finger and BTB domain containing 37
chr1	160860331	160862348	-	160860331;160861854	160861658;160862348	ES	0.5	50	50	ENSMUST00000163079.9	ENSMUSG00000043467.20	Zbtb37	chr1	protein_coding	zinc finger and BTB domain containing 37
chr1	160862289	160863322	+	160862027	160863322	A5SS	0.33	50	50	ENSMUST00000160152.8	ENSMUSG00000053332.14	Gas5	chr1	lncRNA	growth arrest specific 5
chr1	160862764	160863322	+	160862027	160863322	A5SS	0.33	50	50	ENSMUST00000160152.8	ENSMUSG00000053332.14	Gas5	chr1	lncRNA	growth arrest specific 5
chr1	160864422	160865075	+	160864885	160865075	A5SS	0.5	50	50	ENSMUST00000160152.8	ENSMUSG00000053332.14	Gas5	chr1	lncRNA	growth arrest specific 5
chr1	160864422	160864694	+	160864422	160865795	A3SS	0.25	50	50	ENSMUST00000161005.8	ENSMUSG00000053332.14	Gas5	chr1	lncRNA	growth arrest specific 5
chr1	160864422	160864858	+	160864422	160865795	A3SS	0.25	50	50	ENSMUST00000161005.8	ENSMUSG00000053332.14	Gas5	chr1	lncRNA	growth arrest specific 5
chr1	160864422	160865075	+	160864422	160865795	A3SS	0.25	50	50	ENSMUST00000161005.8	ENSMUSG00000053332.14	Gas5	chr1	lncRNA	growth arrest specific 5
chr1	160862764	160863322	+	160862289	160863322	A5SS	0.33	50	50	ENSMUST00000161005.8	ENSMUSG00000053332.14	Gas5	chr1	lncRNA	growth arrest specific 5
chr1	160865607	160865795	+	160864422	160865795	A5SS	0.5	50	50	ENSMUST00000161005.8	ENSMUSG00000053332.14	Gas5	chr1	lncRNA	growth arrest specific 5
chr1	160864422;160864885	160864694;160865075	+	160864422	160865075	cassetteExon	0.5	100	100	ENSMUST00000159119.8	ENSMUSG00000053332.14	Gas5	chr1	lncRNA	growth arrest specific 5
chr1	160864422;160864885	160864858;160865075	+	160864422	160865075	cassetteExon	0.5	100	100	ENSMUST00000159119.8	ENSMUSG00000053332.14	Gas5	chr1	lncRNA	growth arrest specific 5
chr1	160864422;160864734	160864694;160864858	+	160864422	160864858	cassetteExon	0.5	100	100	ENSMUST00000159706.8	ENSMUSG00000053332.14	Gas5	chr1	lncRNA	growth arrest specific 5
chr1	160864422	160864858	+	160864734	160864858	A5SS	0.5	50	50	ENSMUST00000161380.8	ENSMUSG00000053332.14	Gas5	chr1	lncRNA	growth arrest specific 5
chr1	160864422	160865075	+	160864422	160864858	A3SS	0.25	50	50	ENSMUST00000159404.8	ENSMUSG00000053332.14	Gas5	chr1	lncRNA	growth arrest specific 5
chr1	160874499	160878901	-	160874499;160877570	160877508;160878901	ES	0.5	50	50	ENSMUST00000035430.4	ENSMUSG00000026709.11	Dars2	chr1	protein_coding	aspartyl-tRNA synthetase 2 (mitochondrial)
chr1	160874499	160874602	-	160874499	160877508	A5SS	0.33	50	50	ENSMUST00000035430.4	ENSMUSG00000026709.11	Dars2	chr1	protein_coding	aspartyl-tRNA synthetase 2 (mitochondrial)
chr1	160896749	160898113	-	160896749	160897563	A5SS	0.5	50	50	ENSMUST00000035430.4	ENSMUSG00000026709.11	Dars2	chr1	protein_coding	aspartyl-tRNA synthetase 2 (mitochondrial)
chr1	160874499	160878901	-	160874499	160874602	5pMXE	0.33	50	50	ENSMUST00000161748.8	ENSMUSG00000026709.11	Dars2	chr1	protein_coding	aspartyl-tRNA synthetase 2 (mitochondrial)
chr1	160898926;160900534	160900449;160902327	+	160898926	160902327	cassetteExon	0.5	100	100	ENSMUST00000028035.14	ENSMUSG00000026708.17	Cenpl	chr1	protein_coding	centromere protein L
chr1	160906050;160907580	160907438;160910478	+	160906050	160910478	cassetteExon	0.5	100	100	ENSMUST00000028035.14	ENSMUSG00000026708.17	Cenpl	chr1	protein_coding	centromere protein L
chr1	160902500	160905899	+	160902500	160905799	A3SS	0.5	50	50	ENSMUST00000028035.14	ENSMUSG00000026708.17	Cenpl	chr1	protein_coding	centromere protein L
chr1	160903670	160905799	+	160902500	160905799	A5SS	0.5	50	50	ENSMUST00000028035.14	ENSMUSG00000026708.17	Cenpl	chr1	protein_coding	centromere protein L
chr1	160916767	160917484	-	160916694	160917484	A3SS	0.5	50	50	ENSMUST00000117467.7	ENSMUSG00000026705.17	Klhl20	chr1	protein_coding	kelch-like 20
chr1	160970410	160978535	+	160970288	160978535	A5SS	0.5	50	50	ENSMUST00000125018.8	ENSMUSG00000044835.16	Ankrd45	chr1	protein_coding	ankyrin repeat domain 45
chr1	160970410	160982816	+	160978887	160982816	A5SS&ES	0.5	50	50	ENSMUST00000125018.8	ENSMUSG00000044835.16	Ankrd45	chr1	protein_coding	ankyrin repeat domain 45
chr1	160970410	160988237	+	160982983	160988237	A5SS&ES	0.5	50	50	ENSMUST00000125018.8	ENSMUSG00000044835.16	Ankrd45	chr1	protein_coding	ankyrin repeat domain 45
chr1	160970410	160982816	+	160970410;160978887	160978535;160982816	ES	0.5	50	50	ENSMUST00000111608.8	ENSMUSG00000044835.16	Ankrd45	chr1	protein_coding	ankyrin repeat domain 45
chr1	160970410;160982983	160982816;160988237	+	160970410	160988237	cassetteExon	0.5	100	100	ENSMUST00000192384.6	ENSMUSG00000044835.16	Ankrd45	chr1	protein_coding	ankyrin repeat domain 45
chr1	160970410	160978535	+	160970410	160988237	A3SS	0.33	50	50	ENSMUST00000192384.6	ENSMUSG00000044835.16	Ankrd45	chr1	protein_coding	ankyrin repeat domain 45
chr1	161044459	161048147	+	161044459	161050509	A3SS	0.5	50	50	ENSMUST00000193379.2	ENSMUSG00000102817.3	Gm6185	chr1	transcribed_unprocessed_pseudogene	predicted gene 6185
chr1	161051642	161052155	+	161051642	161052131	A3SS	0.5	50	50	ENSMUST00000193379.2	ENSMUSG00000102817.3	Gm6185	chr1	transcribed_unprocessed_pseudogene	predicted gene 6185
chr1	161055595	161056996	+	161055595	161056993	A3SS	0.5	50	50	ENSMUST00000193379.2	ENSMUSG00000102817.3	Gm6185	chr1	transcribed_unprocessed_pseudogene	predicted gene 6185
chr1	161028525	161030711	+	161028550	161030711	A5SS	0.5	50	50	ENSMUST00000193379.2	ENSMUSG00000102817.3	Gm6185	chr1	transcribed_unprocessed_pseudogene	predicted gene 6185
chr1	161050655	161051517	+	161050667	161051517	A5SS	0.5	50	50	ENSMUST00000193379.2	ENSMUSG00000102817.3	Gm6185	chr1	transcribed_unprocessed_pseudogene	predicted gene 6185
chr1	161052247	161055428	+	161052250	161055428	A5SS	0.5	50	50	ENSMUST00000193379.2	ENSMUSG00000102817.3	Gm6185	chr1	transcribed_unprocessed_pseudogene	predicted gene 6185
chr1	161057127	161060022	+	161057166	161060022	A5SS	0.5	50	50	ENSMUST00000193379.2	ENSMUSG00000102817.3	Gm6185	chr1	transcribed_unprocessed_pseudogene	predicted gene 6185
chr1	161071912	161078592	-	161071912;161074983	161074827;161078592	ES	0.33	50	50	ENSMUST00000071718.12	ENSMUSG00000026701.16	Prdx6	chr1	protein_coding	peroxiredoxin 6
chr1	161074983;161077039	161076929;161078592	-	161074983	161078592	cassetteExon	0.5	100	100	ENSMUST00000071718.12	ENSMUSG00000026701.16	Prdx6	chr1	protein_coding	peroxiredoxin 6
chr1	161071912	161078327	-	161071912	161074827	A5SS&ES	0.33	50	50	ENSMUST00000071718.12	ENSMUSG00000026701.16	Prdx6	chr1	protein_coding	peroxiredoxin 6
chr1	161074983	161078015	-	161074983	161078592	A5SS	0.2	50	50	ENSMUST00000071718.12	ENSMUSG00000026701.16	Prdx6	chr1	protein_coding	peroxiredoxin 6
chr1	161074983	161078327	-	161074983	161078592	A5SS	0.2	50	50	ENSMUST00000071718.12	ENSMUSG00000026701.16	Prdx6	chr1	protein_coding	peroxiredoxin 6
chr1	161074983	161078564	-	161074983	161078592	A5SS	0.2	50	50	ENSMUST00000071718.12	ENSMUSG00000026701.16	Prdx6	chr1	protein_coding	peroxiredoxin 6
chr1	161077039	161078592	-	161071912	161078592	A3SS	0.33	50	50	ENSMUST00000192639.6	ENSMUSG00000026701.16	Prdx6	chr1	protein_coding	peroxiredoxin 6
chr1	161071912	161078327	-	161071912	161078592	A5SS	0.33	50	50	ENSMUST00000192639.6	ENSMUSG00000026701.16	Prdx6	chr1	protein_coding	peroxiredoxin 6
chr1	161077930	161078564	-	161074983	161078564	A3SS	0.5	50	50	ENSMUST00000156678.8	ENSMUSG00000026701.16	Prdx6	chr1	protein_coding	peroxiredoxin 6
chr1	161071912	161078592	-	161071912	161074827	A5SS&ES	0.33	50	50	ENSMUST00000156678.8	ENSMUSG00000026701.16	Prdx6	chr1	protein_coding	peroxiredoxin 6
chr1	161074983	161076929	-	161074983	161078564	A5SS	0.2	50	50	ENSMUST00000156678.8	ENSMUSG00000026701.16	Prdx6	chr1	protein_coding	peroxiredoxin 6
chr1	161074983	161078015	-	161074983	161078564	A5SS	0.2	50	50	ENSMUST00000156678.8	ENSMUSG00000026701.16	Prdx6	chr1	protein_coding	peroxiredoxin 6
chr1	161074983	161078327	-	161074983	161078564	A5SS	0.2	50	50	ENSMUST00000156678.8	ENSMUSG00000026701.16	Prdx6	chr1	protein_coding	peroxiredoxin 6
chr1	161074983	161078015	-	161074983	161076929	A5SS&ES	0.2	50	50	ENSMUST00000051925.5	ENSMUSG00000026701.16	Prdx6	chr1	protein_coding	peroxiredoxin 6
chr1	161074983	161078327	-	161074983	161076929	A5SS&ES	0.2	50	50	ENSMUST00000051925.5	ENSMUSG00000026701.16	Prdx6	chr1	protein_coding	peroxiredoxin 6
chr1	161071912;161074983	161074827;161078327	-	161071912	161078327	cassetteExon	0.5	100	100	ENSMUST00000156318.8	ENSMUSG00000026701.16	Prdx6	chr1	protein_coding	peroxiredoxin 6
chr1	161074983	161078327	-	161074983	161078015	5pMXE	0.2	50	50	ENSMUST00000139387.8	ENSMUSG00000026701.16	Prdx6	chr1	protein_coding	peroxiredoxin 6
chr1	161672927	161674774	-	161672927;161673149	161673129;161674774	ES	0.5	50	50	ENSMUST00000048377.11	ENSMUSG00000040297.13	Suco	chr1	protein_coding	SUN domain containing ossification factor
chr1	161680504	161681284	-	161680516	161681284	A3SS	0.5	50	50	ENSMUST00000048377.11	ENSMUSG00000040297.13	Suco	chr1	protein_coding	SUN domain containing ossification factor
chr1	161666391	161671571	-	161662762	161671571	A3SS	0.5	50	50	ENSMUST00000194388.2	ENSMUSG00000040297.13	Suco	chr1	protein_coding	SUN domain containing ossification factor
chr1	161662762	161665288	-	161662762	161671571	A5SS	0.5	50	50	ENSMUST00000194388.2	ENSMUSG00000040297.13	Suco	chr1	protein_coding	SUN domain containing ossification factor
chr1	161720533	161730514	+	161720533	161728298	3pMXE	0.5	50	50	ENSMUST00000193561.6	ENSMUSG00000103158.6	Gm31925	chr1	lncRNA	predicted gene, 31925
chr1	161795565	161796534	-	161795565	161807055	A5SS	0.5	50	50	ENSMUST00000162676.2	ENSMUSG00000086277.3	4930558K02Rik	chr1	protein_coding	RIKEN cDNA 4930558K02 gene
chr1	161796848	161853113	+	161796848	161797809	3pMXE	0.33	50	50	ENSMUST00000111594.3	ENSMUSG00000026698.9	Pigc	chr1	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class C
chr1	161796848	161797796	+	161796848	161797809	A3SS	0.33	50	50	ENSMUST00000111594.3	ENSMUSG00000026698.9	Pigc	chr1	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class C
chr1	161796938	161797809	+	161796848	161797809	A5SS	0.33	50	50	ENSMUST00000111594.3	ENSMUSG00000026698.9	Pigc	chr1	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class C
chr1	161797046	161797809	+	161796848	161797809	A5SS	0.33	50	50	ENSMUST00000111594.3	ENSMUSG00000026698.9	Pigc	chr1	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class C
chr1	161796848	161853113	+	161796848	161797796	3pMXE	0.33	50	50	ENSMUST00000028021.7	ENSMUSG00000026698.9	Pigc	chr1	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class C
chr1	161797046	161797809	+	161796938	161797809	A5SS	0.33	50	50	ENSMUST00000160881.2	ENSMUSG00000026698.9	Pigc	chr1	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class C
chr1	161847561;161872966	161872955;161911602	-	161847561	161911602	cassetteExon	0.5	100	100	ENSMUST00000159763.8	ENSMUSG00000040265.17	Dnm3	chr1	protein_coding	dynamin 3
chr1	162059336;162102108	162102057;162113566	-	162059336	162113566	cassetteExon	0.5	100	100	ENSMUST00000159763.8	ENSMUSG00000040265.17	Dnm3	chr1	protein_coding	dynamin 3
chr1	161819660	161838437	-	161810205	161838437	A3SS	0.33	50	50	ENSMUST00000159763.8	ENSMUSG00000040265.17	Dnm3	chr1	protein_coding	dynamin 3
chr1	161834014	161838437	-	161810205	161838437	A3SS	0.33	50	50	ENSMUST00000159763.8	ENSMUSG00000040265.17	Dnm3	chr1	protein_coding	dynamin 3
chr1	162110333	162113566	-	162059336	162113566	A3SS	0.33	50	50	ENSMUST00000159763.8	ENSMUSG00000040265.17	Dnm3	chr1	protein_coding	dynamin 3
chr1	161962135	161962242	-	161962135	162059223	A5SS	0.5	50	50	ENSMUST00000159763.8	ENSMUSG00000040265.17	Dnm3	chr1	protein_coding	dynamin 3
chr1	161834014	161838437	-	161819660	161838437	A3SS	0.33	50	50	ENSMUST00000086074.12	ENSMUSG00000040265.17	Dnm3	chr1	protein_coding	dynamin 3
chr1	162101218	162102057	-	162059336	162102057	A3SS	0.5	50	50	ENSMUST00000086074.12	ENSMUSG00000040265.17	Dnm3	chr1	protein_coding	dynamin 3
chr1	162110333	162113566	-	162102108	162113566	A3SS	0.33	50	50	ENSMUST00000086074.12	ENSMUSG00000040265.17	Dnm3	chr1	protein_coding	dynamin 3
chr1	162213808	162234904	-	162183078	162234904	A3SS	0.5	50	50	ENSMUST00000086074.12	ENSMUSG00000040265.17	Dnm3	chr1	protein_coding	dynamin 3
chr1	162234977	162252024	-	162234977	162305232	A5SS	0.5	50	50	ENSMUST00000086074.12	ENSMUSG00000040265.17	Dnm3	chr1	protein_coding	dynamin 3
chr1	161833106	161843889	+	161833391	161843889	A5SS	0.5	50	50	ENSMUST00000161583.2	ENSMUSG00000090260.2	2810442N19Rik	chr1	lncRNA	RIKEN cDNA 2810442N19 gene
chr1	162045664	162049423	+	162045664;162047939	162047857;162049423	ES	0.5	50	50	ENSMUST00000185878.3	ENSMUSG00000078190.8	Dnm3os	chr1	lncRNA	dynamin 3, opposite strand
chr1	162045664	162047877	+	162045664	162047857	A3SS	0.33	50	50	ENSMUST00000185878.3	ENSMUSG00000078190.8	Dnm3os	chr1	lncRNA	dynamin 3, opposite strand
chr1	162045664	162049423	+	162045664;162047939	162047877;162049423	ES	0.5	50	50	ENSMUST00000232506.2	ENSMUSG00000078190.8	Dnm3os	chr1	lncRNA	dynamin 3, opposite strand
chr1	162045664	162049423	+	162047939	162049423	5pMXE	0.5	50	50	ENSMUST00000231725.2	ENSMUSG00000078190.8	Dnm3os	chr1	lncRNA	dynamin 3, opposite strand
chr1	162364900	162369827	-	162364900;162366568	162366401;162369827	ES	0.5	50	50	ENSMUST00000028017.16	ENSMUSG00000026694.20	Eef1aknmt	chr1	protein_coding	EEF1A lysine and N-terminal methyltransferase
chr1	162371954	162373797	-	162371954	162373337	A5SS	0.33	50	50	ENSMUST00000028017.16	ENSMUSG00000026694.20	Eef1aknmt	chr1	protein_coding	EEF1A lysine and N-terminal methyltransferase
chr1	162371954	162373815	-	162371954	162373337	A5SS	0.33	50	50	ENSMUST00000028017.16	ENSMUSG00000026694.20	Eef1aknmt	chr1	protein_coding	EEF1A lysine and N-terminal methyltransferase
chr1	162371954	162373797	-	162371954	162373815	A5SS	0.33	50	50	ENSMUST00000159817.9	ENSMUSG00000026694.20	Eef1aknmt	chr1	protein_coding	EEF1A lysine and N-terminal methyltransferase
chr1	162374096	162375673	-	162366568	162375673	A3SS	0.5	50	50	ENSMUST00000176689.2	ENSMUSG00000026694.20	Eef1aknmt	chr1	protein_coding	EEF1A lysine and N-terminal methyltransferase
chr1	162364900	162369827	-	162364900	162366401	A5SS&ES	0.5	50	50	ENSMUST00000176689.2	ENSMUSG00000026694.20	Eef1aknmt	chr1	protein_coding	EEF1A lysine and N-terminal methyltransferase
chr1	162366568	162369827	-	162366568	162375673	A5SS	0.5	50	50	ENSMUST00000176689.2	ENSMUSG00000026694.20	Eef1aknmt	chr1	protein_coding	EEF1A lysine and N-terminal methyltransferase
chr1	162364900	162369827	-	162366568	162369827	3pMXE	0.5	50	50	ENSMUST00000159316.3	ENSMUSG00000026694.20	Eef1aknmt	chr1	protein_coding	EEF1A lysine and N-terminal methyltransferase
chr1	162420246	162422115	+	162420246	162424618	A3SS	0.5	50	50	ENSMUST00000132158.8	ENSMUSG00000026696.16	Vamp4	chr1	protein_coding	vesicle-associated membrane protein 4
chr1	162398448	162401867	+	162398349	162401867	A5SS	0.25	50	50	ENSMUST00000132158.8	ENSMUSG00000026696.16	Vamp4	chr1	protein_coding	vesicle-associated membrane protein 4
chr1	162398629	162401867	+	162398349	162401867	A5SS	0.25	50	50	ENSMUST00000132158.8	ENSMUSG00000026696.16	Vamp4	chr1	protein_coding	vesicle-associated membrane protein 4
chr1	162398952	162401867	+	162398349	162401867	A5SS	0.25	50	50	ENSMUST00000132158.8	ENSMUSG00000026696.16	Vamp4	chr1	protein_coding	vesicle-associated membrane protein 4
chr1	162402680	162405441	+	162401985	162405441	A5SS	0.5	50	50	ENSMUST00000132158.8	ENSMUSG00000026696.16	Vamp4	chr1	protein_coding	vesicle-associated membrane protein 4
chr1	162415819	162417034	+	162415865	162417034	A5SS	0.5	50	50	ENSMUST00000132158.8	ENSMUSG00000026696.16	Vamp4	chr1	protein_coding	vesicle-associated membrane protein 4
chr1	162398629	162401867	+	162398448	162401867	A5SS	0.25	50	50	ENSMUST00000050010.11	ENSMUSG00000026696.16	Vamp4	chr1	protein_coding	vesicle-associated membrane protein 4
chr1	162398952	162401867	+	162398448	162401867	A5SS	0.25	50	50	ENSMUST00000050010.11	ENSMUSG00000026696.16	Vamp4	chr1	protein_coding	vesicle-associated membrane protein 4
chr1	162398952	162401867	+	162398629	162401867	A5SS	0.25	50	50	ENSMUST00000150040.8	ENSMUSG00000026696.16	Vamp4	chr1	protein_coding	vesicle-associated membrane protein 4
chr1	162482166;162484737	162484605;162485615	-	162482166	162485615	cassetteExon	0.5	100	100	ENSMUST00000193898.2	ENSMUSG00000091060.3	Myocos	chr1	protein_coding	myocilin opposite strand
chr1	162482166	162484070	-	162482166	162485615	A5SS	0.33	50	50	ENSMUST00000193898.2	ENSMUSG00000091060.3	Myocos	chr1	protein_coding	myocilin opposite strand
chr1	162482166	162484070	-	162482166	162484605	A5SS	0.33	50	50	ENSMUST00000169439.3	ENSMUSG00000091060.3	Myocos	chr1	protein_coding	myocilin opposite strand
chr1	162501225	162504260	-	162501225;162501720	162501668;162504260	ES	0.33	50	50	ENSMUST00000182149.8	ENSMUSG00000040225.16	Prrc2c	chr1	protein_coding	proline-rich coiled-coil 2C
chr1	162501225;162503410	162503174;162504260	-	162501225;162501720	162501668;162504260	MXE	0.5	100	100	ENSMUST00000182149.8	ENSMUSG00000040225.16	Prrc2c	chr1	protein_coding	proline-rich coiled-coil 2C
chr1	162501720;162503410	162503174;162504260	-	162501720	162504260	cassetteExon	0.5	100	100	ENSMUST00000182149.8	ENSMUSG00000040225.16	Prrc2c	chr1	protein_coding	proline-rich coiled-coil 2C
chr1	162552438;162558931	162558789;162567894	-	162552438	162567894	cassetteExon	0.5	100	100	ENSMUST00000182149.8	ENSMUSG00000040225.16	Prrc2c	chr1	protein_coding	proline-rich coiled-coil 2C
chr1	162550850	162552273	-	162550856	162552273	A3SS	0.5	50	50	ENSMUST00000182149.8	ENSMUSG00000040225.16	Prrc2c	chr1	protein_coding	proline-rich coiled-coil 2C
chr1	162558004	162567894	-	162552438	162567894	A3SS	0.33	50	50	ENSMUST00000182149.8	ENSMUSG00000040225.16	Prrc2c	chr1	protein_coding	proline-rich coiled-coil 2C
chr1	162501225	162501672	-	162501225	162501668	A5SS	0.25	50	50	ENSMUST00000182149.8	ENSMUSG00000040225.16	Prrc2c	chr1	protein_coding	proline-rich coiled-coil 2C
chr1	162505797	162507054	-	162505797	162507069	A5SS	0.5	50	50	ENSMUST00000182149.8	ENSMUSG00000040225.16	Prrc2c	chr1	protein_coding	proline-rich coiled-coil 2C
chr1	162548175	162549014	-	162548175	162548999	A5SS	0.5	50	50	ENSMUST00000182149.8	ENSMUSG00000040225.16	Prrc2c	chr1	protein_coding	proline-rich coiled-coil 2C
chr1	162501225	162504260	-	162501225;162503410	162503174;162504260	ES	0.33	50	50	ENSMUST00000182660.8	ENSMUSG00000040225.16	Prrc2c	chr1	protein_coding	proline-rich coiled-coil 2C
chr1	162501225;162501720	162501668;162503174	-	162501225	162503174	cassetteExon	0.5	100	100	ENSMUST00000182660.8	ENSMUSG00000040225.16	Prrc2c	chr1	protein_coding	proline-rich coiled-coil 2C
chr1	162501225;162501720	162501672;162503174	-	162501225	162503174	cassetteExon	0.5	100	100	ENSMUST00000182660.8	ENSMUSG00000040225.16	Prrc2c	chr1	protein_coding	proline-rich coiled-coil 2C
chr1	162501225;162501720	162501672;162504260	-	162501225;162503410	162503174;162504260	MXE	0.5	100	100	ENSMUST00000182660.8	ENSMUSG00000040225.16	Prrc2c	chr1	protein_coding	proline-rich coiled-coil 2C
chr1	162501225;162501720	162501672;162504260	-	162501225	162504260	cassetteExon	0.5	100	100	ENSMUST00000183223.8	ENSMUSG00000040225.16	Prrc2c	chr1	protein_coding	proline-rich coiled-coil 2C
chr1	162518802	162519942	-	162511825	162519942	A3SS	0.5	50	50	ENSMUST00000183223.8	ENSMUSG00000040225.16	Prrc2c	chr1	protein_coding	proline-rich coiled-coil 2C
chr1	162511825	162515685	-	162511825	162519942	A5SS	0.5	50	50	ENSMUST00000183223.8	ENSMUSG00000040225.16	Prrc2c	chr1	protein_coding	proline-rich coiled-coil 2C
chr1	162558004	162567894	-	162558931	162567894	A3SS&ES	0.33	50	50	ENSMUST00000182331.2	ENSMUSG00000040225.16	Prrc2c	chr1	protein_coding	proline-rich coiled-coil 2C
chr1	162636018	162640098	-	162636018;162637498	162637359;162640098	ES	0.5	50	50	ENSMUST00000111525.8	ENSMUSG00000026692.13	Fmo4	chr1	protein_coding	flavin containing monooxygenase 4
chr1	162640222	162641270	-	162640222	162641145	5pMXE	0.5	50	50	ENSMUST00000111525.8	ENSMUSG00000026692.13	Fmo4	chr1	protein_coding	flavin containing monooxygenase 4
chr1	162668633	162677631	-	162667329	162677631	A3SS	0.5	50	50	ENSMUST00000046049.14	ENSMUSG00000040181.15	Fmo1	chr1	protein_coding	flavin containing monooxygenase 1
chr1	162657883	162658007	-	162657883	162660532	A5SS	0.5	50	50	ENSMUST00000046049.14	ENSMUSG00000040181.15	Fmo1	chr1	protein_coding	flavin containing monooxygenase 1
chr1	162687131	162687335	-	162687131	162693808	A5SS	0.33	50	50	ENSMUST00000046049.14	ENSMUSG00000040181.15	Fmo1	chr1	protein_coding	flavin containing monooxygenase 1
chr1	162687131	162687370	-	162687131	162693808	A5SS	0.33	50	50	ENSMUST00000046049.14	ENSMUSG00000040181.15	Fmo1	chr1	protein_coding	flavin containing monooxygenase 1
chr1	162687131	162687335	-	162687131	162687370	A5SS	0.33	50	50	ENSMUST00000134098.8	ENSMUSG00000040181.15	Fmo1	chr1	protein_coding	flavin containing monooxygenase 1
chr1	162705654	162708145	-	162705654	162707951	A5SS	0.5	50	50	ENSMUST00000045902.13	ENSMUSG00000040170.14	Fmo2	chr1	protein_coding	flavin containing monooxygenase 2
chr1	162725880	162725963	-	162725880	162726241	A5SS	0.5	50	50	ENSMUST00000045902.13	ENSMUSG00000040170.14	Fmo2	chr1	protein_coding	flavin containing monooxygenase 2
chr1	162753819	162757451	-	162753890	162757451	A3SS	0.5	50	50	ENSMUST00000195576.5	ENSMUSG00000095576.6	Fmo6	chr1	protein_coding	flavin containing monooxygenase 6
chr1	163075965	163085330	-	163075965;163081617	163081546;163085330	ES	0.5	50	50	ENSMUST00000075805.13	ENSMUSG00000026586.17	Prrx1	chr1	protein_coding	paired related homeobox 1
chr1	163111521	163139964	-	163089584	163139964	A3SS	0.5	50	50	ENSMUST00000075805.13	ENSMUSG00000026586.17	Prrx1	chr1	protein_coding	paired related homeobox 1
chr1	163089584	163115434	-	163089584	163139964	A5SS	0.5	50	50	ENSMUST00000075805.13	ENSMUSG00000026586.17	Prrx1	chr1	protein_coding	paired related homeobox 1
chr1	163220119;163221295	163221158;163222160	-	163220119	163222160	cassetteExon	0.5	100	100	ENSMUST00000045138.6	ENSMUSG00000040124.6	Gorab	chr1	protein_coding	golgin, RAB6-interacting
chr1	163222261	163224377	-	163222261	163224381	A5SS	0.5	50	50	ENSMUST00000045138.6	ENSMUSG00000040124.6	Gorab	chr1	protein_coding	golgin, RAB6-interacting
chr1	163544827;163550095	163550038;163552471	-	163544827	163552471	cassetteExon	0.5	100	100	ENSMUST00000159679.8	ENSMUSG00000040113.15	Mettl11b	chr1	protein_coding	methyltransferase like 11B
chr1	163531732	163544652	-	163531821	163544652	A3SS	0.5	50	50	ENSMUST00000159679.8	ENSMUSG00000040113.15	Mettl11b	chr1	protein_coding	methyltransferase like 11B
chr1	163715874	163743294	+	163715874;163739706	163739641;163743294	ES	0.5	50	50	ENSMUST00000077642.12	ENSMUSG00000026585.14	Kifap3	chr1	protein_coding	kinesin-associated protein 3
chr1	163761262	163762262	+	163761262	163762201	A3SS	0.5	50	50	ENSMUST00000161908.8	ENSMUSG00000026584.15	Scyl3	chr1	protein_coding	SCY1-like 3 (S. cerevisiae)
chr1	163767552	163768590	+	163767552	163768676	A3SS	0.5	50	50	ENSMUST00000161908.8	ENSMUSG00000026584.15	Scyl3	chr1	protein_coding	SCY1-like 3 (S. cerevisiae)
chr1	163772504	163773733	+	163772504	163773772	A3SS	0.5	50	50	ENSMUST00000161908.8	ENSMUSG00000026584.15	Scyl3	chr1	protein_coding	SCY1-like 3 (S. cerevisiae)
chr1	163757755	163761048	+	163756903	163761048	A5SS	0.5	50	50	ENSMUST00000161908.8	ENSMUSG00000026584.15	Scyl3	chr1	protein_coding	SCY1-like 3 (S. cerevisiae)
chr1	163771806	163772365	+	163771470	163772365	A5SS	0.5	50	50	ENSMUST00000161908.8	ENSMUSG00000026584.15	Scyl3	chr1	protein_coding	SCY1-like 3 (S. cerevisiae)
chr1	163783021	163784397	-	163783025	163784397	A3SS	0.5	50	50	ENSMUST00000097493.10	ENSMUSG00000041406.15	BC055324	chr1	protein_coding	cDNA sequence BC055324
chr1	163788241	163789565	-	163788241	163789533	A5SS	0.5	50	50	ENSMUST00000097493.10	ENSMUSG00000041406.15	BC055324	chr1	protein_coding	cDNA sequence BC055324
chr1	163817362	163818285	-	163817362	163818289	A5SS	0.33	50	50	ENSMUST00000097493.10	ENSMUSG00000041406.15	BC055324	chr1	protein_coding	cDNA sequence BC055324
chr1	163817362	163821824	-	163817362	163818289	A5SS&ES	0.33	50	50	ENSMUST00000097493.10	ENSMUSG00000041406.15	BC055324	chr1	protein_coding	cDNA sequence BC055324
chr1	163817362	163821824	-	163817362	163818285	A5SS&ES	0.33	50	50	ENSMUST00000160926.2	ENSMUSG00000041406.15	BC055324	chr1	protein_coding	cDNA sequence BC055324
chr1	163822546	163823483	+	163822640	163823483	A5SS	0.5	50	50	ENSMUST00000045694.14	ENSMUSG00000041396.14	Mettl18	chr1	protein_coding	methyltransferase like 18
chr1	163893257;163893886	163893779;163894180	+	163893257	163894180	cassetteExon	0.5	100	100	ENSMUST00000192047.6	ENSMUSG00000026581.15	Sell	chr1	protein_coding	selectin, lymphocyte
chr1	163899810;163900746	163900698;163903711	+	163899810	163903711	cassetteExon	0.5	100	100	ENSMUST00000192047.6	ENSMUSG00000026581.15	Sell	chr1	protein_coding	selectin, lymphocyte
chr1	163899810;163900797	163900698;163903711	+	163899810	163903711	cassetteExon	0.5	100	100	ENSMUST00000192047.6	ENSMUSG00000026581.15	Sell	chr1	protein_coding	selectin, lymphocyte
chr1	163900746	163903711	+	163900797	163903711	A5SS	0.33	50	50	ENSMUST00000097491.10	ENSMUSG00000026581.15	Sell	chr1	protein_coding	selectin, lymphocyte
chr1	163969637	163970243	+	163969106	163970243	A5SS	0.5	50	50	ENSMUST00000162746.2	ENSMUSG00000026580.17	Selp	chr1	protein_coding	selectin, platelet
chr1	164077025	164088361	+	164077025;164084918	164084316;164088361	ES	0.33	50	50	ENSMUST00000044021.12	ENSMUSG00000040918.13	Slc19a2	chr1	protein_coding	solute carrier family 19 (thiamine transporter), member 2
chr1	164084804	164088361	+	164084918	164088361	A5SS	0.33	50	50	ENSMUST00000044021.12	ENSMUSG00000040918.13	Slc19a2	chr1	protein_coding	solute carrier family 19 (thiamine transporter), member 2
chr1	164077025	164088361	+	164077025;164084804	164084316;164088361	ES	0.33	50	50	ENSMUST00000159230.8	ENSMUSG00000040918.13	Slc19a2	chr1	protein_coding	solute carrier family 19 (thiamine transporter), member 2
chr1	164084918	164088361	+	164077025	164088361	A5SS	0.33	50	50	ENSMUST00000169394.2	ENSMUSG00000040918.13	Slc19a2	chr1	protein_coding	solute carrier family 19 (thiamine transporter), member 2
chr1	164130289	164134008	-	164130289;164131493	164131473;164134008	ES	0.5	50	50	ENSMUST00000027866.11	ENSMUSG00000026577.14	Blzf1	chr1	protein_coding	basic leucine zipper nuclear factor 1
chr1	164130289	164131417	-	164130289	164131473	A5SS	0.33	50	50	ENSMUST00000027866.11	ENSMUSG00000026577.14	Blzf1	chr1	protein_coding	basic leucine zipper nuclear factor 1
chr1	164130289;164131493	164131417;164134008	-	164130289	164134008	cassetteExon	0.5	100	100	ENSMUST00000120447.8	ENSMUSG00000026577.14	Blzf1	chr1	protein_coding	basic leucine zipper nuclear factor 1
chr1	164135819	164140425	+	164135819	164140422	A3SS	0.5	50	50	ENSMUST00000193808.6	ENSMUSG00000026575.16	Nme7	chr1	protein_coding	NME/NM23 family member 7
chr1	164175448	164175728	+	164175448	164206928	A3SS	0.5	50	50	ENSMUST00000193808.6	ENSMUSG00000026575.16	Nme7	chr1	protein_coding	NME/NM23 family member 7
chr1	164200903	164206928	+	164175448	164206928	A5SS	0.33	50	50	ENSMUST00000193808.6	ENSMUSG00000026575.16	Nme7	chr1	protein_coding	NME/NM23 family member 7
chr1	164200933	164206928	+	164175448	164206928	A5SS	0.33	50	50	ENSMUST00000193808.6	ENSMUSG00000026575.16	Nme7	chr1	protein_coding	NME/NM23 family member 7
chr1	164200903	164206928	+	164200933	164206928	A5SS	0.33	50	50	ENSMUST00000193591.6	ENSMUSG00000026575.16	Nme7	chr1	protein_coding	NME/NM23 family member 7
chr1	164270919	164271175	-	164270919	164281058	A5SS	0.5	50	50	ENSMUST00000027863.13	ENSMUSG00000026576.13	Atp1b1	chr1	protein_coding	ATPase, Na+/K+ transporting, beta 1 polypeptide
chr1	164533489	164539885	-	164533489;164535349	164535186;164539885	ES	0.5	50	50	ENSMUST00000192040.2	ENSMUSG00000102163.2	Gm36945	chr1	lncRNA	predicted gene, 36945
chr1	164631979	164667105	-	164631979	164642776	5pMXE	0.5	50	50	ENSMUST00000194659.2	ENSMUSG00000103659.2	Gm32569	chr1	lncRNA	predicted gene, 32569
chr1	164692212	164693807	+	164692212	164761498	A3SS	0.5	50	50	ENSMUST00000194322.2	ENSMUSG00000104117.6	Gm20743	chr1	lncRNA	predicted gene, 20743
chr1	164788607	164788731	+	164788607	164790069	A3SS	0.5	50	50	ENSMUST00000187300.2	ENSMUSG00000101189.2	1700029M03Rik	chr1	lncRNA	RIKEN cDNA 1700029M03 gene
chr1	164967835	164972625	-	164967835;164970166	164969978;164972625	ES	0.5	50	50	ENSMUST00000027859.12	ENSMUSG00000026572.12	Tbx19	chr1	protein_coding	T-box 19
chr1	164975265	164975819	-	164975265	164979571	A5SS	0.33	50	50	ENSMUST00000027859.12	ENSMUSG00000026572.12	Tbx19	chr1	protein_coding	T-box 19
chr1	164975265	164977013	-	164975265	164979571	A5SS	0.33	50	50	ENSMUST00000027859.12	ENSMUSG00000026572.12	Tbx19	chr1	protein_coding	T-box 19
chr1	164975265	164975819	-	164975265	164977013	A5SS	0.33	50	50	ENSMUST00000161777.8	ENSMUSG00000026572.12	Tbx19	chr1	protein_coding	T-box 19
chr1	164967835	164972625	-	164970166	164972625	3pMXE	0.5	50	50	ENSMUST00000160350.2	ENSMUSG00000026572.12	Tbx19	chr1	protein_coding	T-box 19
chr1	165012658	165015817	-	165012658;165015623	165015538;165015817	ES	0.5	50	50	ENSMUST00000043338.10	ENSMUSG00000040848.12	Sft2d2	chr1	protein_coding	SFT2 domain containing 2
chr1	165012658;165014457	165014291;165015538	-	165012658	165015538	cassetteExon	0.5	100	100	ENSMUST00000043338.10	ENSMUSG00000040848.12	Sft2d2	chr1	protein_coding	SFT2 domain containing 2
chr1	165012658	165014291	-	165012658	165015817	A5SS	0.33	50	50	ENSMUST00000192185.6	ENSMUSG00000040848.12	Sft2d2	chr1	protein_coding	SFT2 domain containing 2
chr1	165056734	165064299	-	165056016	165064299	A3SS	0.5	50	50	ENSMUST00000043235.8	ENSMUSG00000040843.11	Tiprl	chr1	protein_coding	TIP41, TOR signalling pathway regulator-like (S. cerevisiae)
chr1	165056016	165063947	-	165056016	165064299	A5SS	0.33	50	50	ENSMUST00000043235.8	ENSMUSG00000040843.11	Tiprl	chr1	protein_coding	TIP41, TOR signalling pathway regulator-like (S. cerevisiae)
chr1	165056016	165064241	-	165056016	165064299	A5SS	0.33	50	50	ENSMUST00000043235.8	ENSMUSG00000040843.11	Tiprl	chr1	protein_coding	TIP41, TOR signalling pathway regulator-like (S. cerevisiae)
chr1	165056016	165064241	-	165056016	165063947	5pMXE	0.33	50	50	ENSMUST00000195248.3	ENSMUSG00000040843.11	Tiprl	chr1	protein_coding	TIP41, TOR signalling pathway regulator-like (S. cerevisiae)
chr1	165130378	165133747	+	165123457	165133747	A5SS	0.5	50	50	ENSMUST00000178700.8	ENSMUSG00000040836.16	Gpr161	chr1	protein_coding	G protein-coupled receptor 161
chr1	165185115;165195074	165195015;165216227	-	165185115	165216227	cassetteExon	0.5	100	100	ENSMUST00000027856.13	ENSMUSG00000026571.13	Dcaf6	chr1	protein_coding	DDB1 and CUL4 associated factor 6
chr1	165198817	165216227	-	165185115	165216227	A3SS	0.25	50	50	ENSMUST00000027856.13	ENSMUSG00000026571.13	Dcaf6	chr1	protein_coding	DDB1 and CUL4 associated factor 6
chr1	165201804	165216227	-	165185115	165216227	A3SS	0.25	50	50	ENSMUST00000027856.13	ENSMUSG00000026571.13	Dcaf6	chr1	protein_coding	DDB1 and CUL4 associated factor 6
chr1	165195074	165216227	-	165195074;165201804	165201631;165216227	ES	0.25	50	50	ENSMUST00000194869.6	ENSMUSG00000026571.13	Dcaf6	chr1	protein_coding	DDB1 and CUL4 associated factor 6
chr1	165195074;165198817	165198692;165216227	-	165195074;165201804	165201631;165216227	MXE	0.5	100	100	ENSMUST00000194869.6	ENSMUSG00000026571.13	Dcaf6	chr1	protein_coding	DDB1 and CUL4 associated factor 6
chr1	165195074;165198817	165198692;165216227	-	165195074	165216227	cassetteExon	0.5	100	100	ENSMUST00000195220.2	ENSMUSG00000026571.13	Dcaf6	chr1	protein_coding	DDB1 and CUL4 associated factor 6
chr1	165305874	165308472	+	165305874;165307147	165307036;165308472	ES	0.5	50	50	ENSMUST00000027853.6	ENSMUSG00000026568.7	Mpc2	chr1	protein_coding	mitochondrial pyruvate carrier 2
chr1	165289080	165305760	+	165289080	165302523	A3SS&ES	0.5	50	50	ENSMUST00000027853.6	ENSMUSG00000026568.7	Mpc2	chr1	protein_coding	mitochondrial pyruvate carrier 2
chr1	165349536	165365947	+	165349536;165352629	165352574;165365947	ES	0.5	50	50	ENSMUST00000111440.8	ENSMUSG00000026567.17	Adcy10	chr1	protein_coding	adenylate cyclase 10
chr1	165312904;165314895	165314774;165330679	+	165312904	165330679	cassetteExon	0.5	100	100	ENSMUST00000111440.8	ENSMUSG00000026567.17	Adcy10	chr1	protein_coding	adenylate cyclase 10
chr1	165333941	165334105	+	165333941	165334141	A3SS	0.5	50	50	ENSMUST00000111440.8	ENSMUSG00000026567.17	Adcy10	chr1	protein_coding	adenylate cyclase 10
chr1	165338029	165395209	+	165338029	165340639	A3SS&ES	0.5	50	50	ENSMUST00000111440.8	ENSMUSG00000026567.17	Adcy10	chr1	protein_coding	adenylate cyclase 10
chr1	165366103	165367409	+	165366103	165367351	A3SS	0.5	50	50	ENSMUST00000111440.8	ENSMUSG00000026567.17	Adcy10	chr1	protein_coding	adenylate cyclase 10
chr1	165370867	165374087	+	165370896	165374087	A5SS	0.5	50	50	ENSMUST00000111440.8	ENSMUSG00000026567.17	Adcy10	chr1	protein_coding	adenylate cyclase 10
chr1	165314895	165316428	+	165314895	165330679	A3SS	0.5	50	50	ENSMUST00000111439.8	ENSMUSG00000026567.17	Adcy10	chr1	protein_coding	adenylate cyclase 10
chr1	165421246	165433178	-	165421246;165432311	165432179;165433178	ES	0.33	50	50	ENSMUST00000068705.13	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165421246;165429424	165429319;165432179	-	165421246	165432179	cassetteExon	0.5	100	100	ENSMUST00000068705.13	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165421246;165429424	165429319;165433178	-	165421246;165432311	165432179;165433178	MXE	0.5	100	100	ENSMUST00000068705.13	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165421246;165429433	165429319;165432179	-	165421246	165432179	cassetteExon	0.5	100	100	ENSMUST00000068705.13	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165436173	165437045	-	165436173	165461872	A5SS	0.16	50	50	ENSMUST00000068705.13	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165436173	165438030	-	165436173	165461872	A5SS	0.16	50	50	ENSMUST00000068705.13	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165436173	165441494	-	165436173	165461872	A5SS	0.16	50	50	ENSMUST00000068705.13	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165436173	165452656	-	165436173	165461872	A5SS	0.16	50	50	ENSMUST00000068705.13	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165436173	165461445	-	165436173	165461872	A5SS	0.16	50	50	ENSMUST00000068705.13	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165429424	165433178	-	165429424;165432311	165432179;165433178	ES	0.33	50	50	ENSMUST00000111435.9	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165429433	165432179	-	165429424	165432179	A3SS	0.33	50	50	ENSMUST00000111435.9	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165421246	165433178	-	165421246;165429424	165429319;165433178	ES	0.33	50	50	ENSMUST00000195410.6	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165421246	165436007	-	165421246	165433178	5pMXE	0.25	50	50	ENSMUST00000193948.2	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165436173	165438030	-	165436173	165437045	5pMXE	0.16	50	50	ENSMUST00000191818.6	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165436173	165441494	-	165436173	165437045	5pMXE	0.16	50	50	ENSMUST00000191818.6	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165436173	165452656	-	165436173	165437045	5pMXE	0.16	50	50	ENSMUST00000191818.6	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165436173	165461445	-	165436173	165437045	5pMXE	0.16	50	50	ENSMUST00000191818.6	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165421246;165433391	165433178;165436007	-	165421246	165436007	cassetteExon	0.5	100	100	ENSMUST00000194437.6	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165421246	165429319	-	165421246	165436007	A5SS	0.25	50	50	ENSMUST00000194437.6	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165421246	165432179	-	165421246	165436007	A5SS	0.25	50	50	ENSMUST00000194437.6	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165429424	165433178	-	165432311	165433178	A3SS&ES	0.33	50	50	ENSMUST00000193023.2	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165421246	165432179	-	165429424	165432179	3pMXE	0.33	50	50	ENSMUST00000194829.6	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165436173	165441494	-	165436173	165438030	5pMXE	0.16	50	50	ENSMUST00000194829.6	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165436173	165452656	-	165436173	165438030	5pMXE	0.16	50	50	ENSMUST00000194829.6	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165436173	165461445	-	165436173	165438030	5pMXE	0.16	50	50	ENSMUST00000194829.6	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165421246	165433178	-	165432311	165433178	3pMXE	0.33	50	50	ENSMUST00000192716.2	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165421246	165436007	-	165433391	165436007	3pMXE	0.5	50	50	ENSMUST00000192848.6	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165436173	165452656	-	165436173	165441494	5pMXE	0.16	50	50	ENSMUST00000192848.6	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165436173	165461445	-	165436173	165441494	5pMXE	0.16	50	50	ENSMUST00000192848.6	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165436173	165461445	-	165436173	165452656	A5SS&ES	0.16	50	50	ENSMUST00000193910.6	ENSMUSG00000026566.16	Mpzl1	chr1	protein_coding	myelin protein zero-like 1
chr1	165487013;165491224	165491135;165492518	-	165487013	165492518	cassetteExon	0.5	100	100	ENSMUST00000097474.9	ENSMUSG00000040723.15	Rcsd1	chr1	protein_coding	RCSD domain containing 1
chr1	165536622	165536742	-	165535649	165536742	A3SS	0.5	50	50	ENSMUST00000193714.2	ENSMUSG00000040723.15	Rcsd1	chr1	protein_coding	RCSD domain containing 1
chr1	165591707;165592323	165592170;165597382	+	165591707	165597382	cassetteExon	0.5	100	100	ENSMUST00000111432.10	ENSMUSG00000040713.13	Creg1	chr1	protein_coding	cellular repressor of E1A-stimulated genes 1
chr1	165597089	165597382	+	165591707	165597382	A5SS	0.33	50	50	ENSMUST00000111432.10	ENSMUSG00000040713.13	Creg1	chr1	protein_coding	cellular repressor of E1A-stimulated genes 1
chr1	165597089	165597382	+	165592323	165597382	A5SS	0.33	50	50	ENSMUST00000140769.2	ENSMUSG00000040713.13	Creg1	chr1	protein_coding	cellular repressor of E1A-stimulated genes 1
chr1	165687393;165694317	165694224;165696587	+	165687393	165696587	cassetteExon	0.5	100	100	ENSMUST00000161971.8	ENSMUSG00000005763.16	Cd247	chr1	protein_coding	CD247 antigen
chr1	165687393;165694467	165694224;165696587	+	165687393	165696587	cassetteExon	0.5	100	100	ENSMUST00000161971.8	ENSMUSG00000005763.16	Cd247	chr1	protein_coding	CD247 antigen
chr1	165685065	165686015	+	165685065	165686012	A3SS	0.5	50	50	ENSMUST00000161971.8	ENSMUSG00000005763.16	Cd247	chr1	protein_coding	CD247 antigen
chr1	165687393	165688573	+	165687393	165696587	A3SS	0.33	50	50	ENSMUST00000161971.8	ENSMUSG00000005763.16	Cd247	chr1	protein_coding	CD247 antigen
chr1	165687393	165688573	+	165687393	165694224	A3SS	0.33	50	50	ENSMUST00000187313.7	ENSMUSG00000005763.16	Cd247	chr1	protein_coding	CD247 antigen
chr1	165692309	165694224	+	165687393	165694224	A5SS	0.5	50	50	ENSMUST00000187313.7	ENSMUSG00000005763.16	Cd247	chr1	protein_coding	CD247 antigen
chr1	165694317	165696587	+	165694467	165696587	A5SS	0.33	50	50	ENSMUST00000187313.7	ENSMUSG00000005763.16	Cd247	chr1	protein_coding	CD247 antigen
chr1	165687393	165696587	+	165687393	165694224	3pMXE	0.33	50	50	ENSMUST00000027849.11	ENSMUSG00000005763.16	Cd247	chr1	protein_coding	CD247 antigen
chr1	165703617	165707699	-	165703617;165704634	165704546;165707699	ES	0.5	50	50	ENSMUST00000111427.9	ENSMUSG00000026565.19	Pou2f1	chr1	protein_coding	POU domain, class 2, transcription factor 1
chr1	165708044	165719379	-	165708044;165710687	165710616;165719379	ES	0.5	50	50	ENSMUST00000111427.9	ENSMUSG00000026565.19	Pou2f1	chr1	protein_coding	POU domain, class 2, transcription factor 1
chr1	165725335	165734254	-	165725335;165729882	165729709;165734254	ES	0.5	50	50	ENSMUST00000111427.9	ENSMUSG00000026565.19	Pou2f1	chr1	protein_coding	POU domain, class 2, transcription factor 1
chr1	165736575	165740796	-	165736575;165739045	165738857;165740796	ES	0.5	50	50	ENSMUST00000111427.9	ENSMUSG00000026565.19	Pou2f1	chr1	protein_coding	POU domain, class 2, transcription factor 1
chr1	165740918	165744491	-	165740918;165742732	165742679;165744491	ES	0.5	50	50	ENSMUST00000111427.9	ENSMUSG00000026565.19	Pou2f1	chr1	protein_coding	POU domain, class 2, transcription factor 1
chr1	165759296	165773471	-	165759296	165762373	5pMXE	0.25	50	50	ENSMUST00000111427.9	ENSMUSG00000026565.19	Pou2f1	chr1	protein_coding	POU domain, class 2, transcription factor 1
chr1	165759296	165780350	-	165759296	165762373	5pMXE	0.25	50	50	ENSMUST00000111427.9	ENSMUSG00000026565.19	Pou2f1	chr1	protein_coding	POU domain, class 2, transcription factor 1
chr1	165759296	165830131	-	165759296	165762373	5pMXE	0.25	50	50	ENSMUST00000111427.9	ENSMUSG00000026565.19	Pou2f1	chr1	protein_coding	POU domain, class 2, transcription factor 1
chr1	165703085	165704546	-	165703617	165704546	A3SS	0.33	50	50	ENSMUST00000111427.9	ENSMUSG00000026565.19	Pou2f1	chr1	protein_coding	POU domain, class 2, transcription factor 1
chr1	165703545	165704546	-	165703617	165704546	A3SS	0.33	50	50	ENSMUST00000111427.9	ENSMUSG00000026565.19	Pou2f1	chr1	protein_coding	POU domain, class 2, transcription factor 1
chr1	165759296;165773571	165773471;165830131	-	165759296	165830131	cassetteExon	0.5	100	100	ENSMUST00000160260.9	ENSMUSG00000026565.19	Pou2f1	chr1	protein_coding	POU domain, class 2, transcription factor 1
chr1	165759296;165780425	165780350;165830131	-	165759296	165830131	cassetteExon	0.5	100	100	ENSMUST00000160260.9	ENSMUSG00000026565.19	Pou2f1	chr1	protein_coding	POU domain, class 2, transcription factor 1
chr1	165703085;165703545	165703472;165704546	-	165703085	165704546	cassetteExon	0.5	100	100	ENSMUST00000159212.9	ENSMUSG00000026565.19	Pou2f1	chr1	protein_coding	POU domain, class 2, transcription factor 1
chr1	165703085;165703617	165703472;165704546	-	165703085	165704546	cassetteExon	0.5	100	100	ENSMUST00000159212.9	ENSMUSG00000026565.19	Pou2f1	chr1	protein_coding	POU domain, class 2, transcription factor 1
chr1	165703085;165703617	165703472;165707699	-	165703085;165704634	165704546;165707699	MXE	0.5	100	100	ENSMUST00000159212.9	ENSMUSG00000026565.19	Pou2f1	chr1	protein_coding	POU domain, class 2, transcription factor 1
chr1	165759296;165780425	165780350;165830131	-	165759296;165773571	165773471;165830131	MXE	0.5	100	100	ENSMUST00000111429.11	ENSMUSG00000026565.19	Pou2f1	chr1	protein_coding	POU domain, class 2, transcription factor 1
chr1	165773571;165780425	165780350;165830131	-	165773571	165830131	cassetteExon	0.5	100	100	ENSMUST00000111429.11	ENSMUSG00000026565.19	Pou2f1	chr1	protein_coding	POU domain, class 2, transcription factor 1
chr1	165703085	165704546	-	165703545	165704546	A3SS	0.33	50	50	ENSMUST00000111426.11	ENSMUSG00000026565.19	Pou2f1	chr1	protein_coding	POU domain, class 2, transcription factor 1
chr1	165703617	165707699	-	165704634	165707699	A3SS&ES	0.5	50	50	ENSMUST00000111426.11	ENSMUSG00000026565.19	Pou2f1	chr1	protein_coding	POU domain, class 2, transcription factor 1
chr1	165736575	165740796	-	165739045	165740796	3pMXE	0.5	50	50	ENSMUST00000177358.8	ENSMUSG00000026565.19	Pou2f1	chr1	protein_coding	POU domain, class 2, transcription factor 1
chr1	165759296;165773571	165773471;165780350	-	165759296	165780350	cassetteExon	0.5	100	100	ENSMUST00000177358.8	ENSMUSG00000026565.19	Pou2f1	chr1	protein_coding	POU domain, class 2, transcription factor 1
chr1	165954772	165955361	-	165954768	165955361	A3SS	0.5	50	50	ENSMUST00000192369.6	ENSMUSG00000026564.10	Dusp27	chr1	protein_coding	dual specificity phosphatase 27 (putative)
chr1	165958173	165980137	+	165958173;165974362	165974208;165980137	ES	0.5	50	50	ENSMUST00000060833.14	ENSMUSG00000000544.15	Gpa33	chr1	protein_coding	glycoprotein A33 (transmembrane)
chr1	165980353	165981479	+	165980353	165985082	A3SS	0.5	50	50	ENSMUST00000060833.14	ENSMUSG00000000544.15	Gpa33	chr1	protein_coding	glycoprotein A33 (transmembrane)
chr1	166054259;166061775	166061734;166062970	-	166054259	166062970	cassetteExon	0.5	100	100	ENSMUST00000194057.6	ENSMUSG00000040629.9	Mael	chr1	protein_coding	maelstrom spermatogenic transposon silencer
chr1	166098187	166122160	+	166098187;166119041	166118985;166122160	ES	0.5	50	50	ENSMUST00000111416.7	ENSMUSG00000040612.14	Ildr2	chr1	protein_coding	immunoglobulin-like domain containing receptor 2
chr1	166122306	166131071	+	166122306;166123497	166123321;166131071	ES	0.25	50	50	ENSMUST00000111416.7	ENSMUSG00000040612.14	Ildr2	chr1	protein_coding	immunoglobulin-like domain containing receptor 2
chr1	166135502	166138329	+	166135502;166137112	166136416;166138329	ES	0.33	50	50	ENSMUST00000111416.7	ENSMUSG00000040612.14	Ildr2	chr1	protein_coding	immunoglobulin-like domain containing receptor 2
chr1	166119041	166131071	+	166119041;166122306	166122160;166131071	ES	0.25	50	50	ENSMUST00000194964.6	ENSMUSG00000040612.14	Ildr2	chr1	protein_coding	immunoglobulin-like domain containing receptor 2
chr1	166098187;166119041	166118985;166131071	+	166098187;166123497	166122160;166131071	MXE	0.5	100	100	ENSMUST00000192638.6	ENSMUSG00000040612.14	Ildr2	chr1	protein_coding	immunoglobulin-like domain containing receptor 2
chr1	166098187	166118985	+	166098187	166138329	A3SS	0.25	50	50	ENSMUST00000192426.6	ENSMUSG00000040612.14	Ildr2	chr1	protein_coding	immunoglobulin-like domain containing receptor 2
chr1	166098187	166122160	+	166098187	166138329	A3SS	0.25	50	50	ENSMUST00000192426.6	ENSMUSG00000040612.14	Ildr2	chr1	protein_coding	immunoglobulin-like domain containing receptor 2
chr1	166098187	166131071	+	166098187	166138329	A3SS	0.25	50	50	ENSMUST00000192426.6	ENSMUSG00000040612.14	Ildr2	chr1	protein_coding	immunoglobulin-like domain containing receptor 2
chr1	166135502	166138329	+	166098187	166138329	A5SS	0.33	50	50	ENSMUST00000192426.6	ENSMUSG00000040612.14	Ildr2	chr1	protein_coding	immunoglobulin-like domain containing receptor 2
chr1	166137112	166138329	+	166098187	166138329	A5SS	0.33	50	50	ENSMUST00000192426.6	ENSMUSG00000040612.14	Ildr2	chr1	protein_coding	immunoglobulin-like domain containing receptor 2
chr1	166135502	166136416	+	166135502	166138329	A3SS	0.5	50	50	ENSMUST00000195557.6	ENSMUSG00000040612.14	Ildr2	chr1	protein_coding	immunoglobulin-like domain containing receptor 2
chr1	166137112	166138329	+	166135502	166138329	A5SS	0.33	50	50	ENSMUST00000195557.6	ENSMUSG00000040612.14	Ildr2	chr1	protein_coding	immunoglobulin-like domain containing receptor 2
chr1	166098187;166119041	166118985;166131071	+	166098187	166131071	cassetteExon	0.5	100	100	ENSMUST00000192732.6	ENSMUSG00000040612.14	Ildr2	chr1	protein_coding	immunoglobulin-like domain containing receptor 2
chr1	166098187;166122306	166122160;166131071	+	166098187	166131071	cassetteExon	0.5	100	100	ENSMUST00000192732.6	ENSMUSG00000040612.14	Ildr2	chr1	protein_coding	immunoglobulin-like domain containing receptor 2
chr1	166123497	166131071	+	166098187	166131071	A5SS	0.25	50	50	ENSMUST00000192732.6	ENSMUSG00000040612.14	Ildr2	chr1	protein_coding	immunoglobulin-like domain containing receptor 2
chr1	166098187;166122306	166122160;166131071	+	166098187;166119041	166118985;166131071	MXE	0.5	100	100	ENSMUST00000193860.2	ENSMUSG00000040612.14	Ildr2	chr1	protein_coding	immunoglobulin-like domain containing receptor 2
chr1	166123497	166131071	+	166119041	166131071	A5SS	0.25	50	50	ENSMUST00000193860.2	ENSMUSG00000040612.14	Ildr2	chr1	protein_coding	immunoglobulin-like domain containing receptor 2
chr1	166207045;166208442	166208351;166209696	+	166207045	166209696	cassetteExon	0.5	100	100	ENSMUST00000027846.8	ENSMUSG00000026563.14	Tada1	chr1	protein_coding	transcriptional adaptor 1
chr1	166236101;166236900	166236567;166237276	-	166236101	166237276	cassetteExon	0.5	100	100	ENSMUST00000135673.8	ENSMUSG00000040596.16	Pogk	chr1	protein_coding	pogo transposable element with KRAB domain
chr1	166224284	166226259	-	166212711	166226259	A3SS	0.5	50	50	ENSMUST00000135673.8	ENSMUSG00000040596.16	Pogk	chr1	protein_coding	pogo transposable element with KRAB domain
chr1	166236101	166237276	-	166236101	166236567	5pMXE	0.5	50	50	ENSMUST00000131487.8	ENSMUSG00000040596.16	Pogk	chr1	protein_coding	pogo transposable element with KRAB domain
chr1	166231193	166235968	-	166227734	166235968	A3SS	0.5	50	50	ENSMUST00000148243.8	ENSMUSG00000040596.16	Pogk	chr1	protein_coding	pogo transposable element with KRAB domain
chr1	166227734	166229435	-	166227734	166235968	A5SS	0.5	50	50	ENSMUST00000148243.8	ENSMUSG00000040596.16	Pogk	chr1	protein_coding	pogo transposable element with KRAB domain
chr1	166508789	166509329	-	166505256	166509329	A3SS	0.5	50	50	ENSMUST00000148677.2	ENSMUSG00000026560.14	Fmo9	chr1	protein_coding	flavin containing monooxygenase 9
chr1	166505256	166507719	-	166505256	166509329	A5SS	0.5	50	50	ENSMUST00000148677.2	ENSMUSG00000026560.14	Fmo9	chr1	protein_coding	flavin containing monooxygenase 9
chr1	166907034	166915547	+	166907354	166915547	A5SS	0.33	50	50	ENSMUST00000165874.8	ENSMUSG00000060568.15	Fam78b	chr1	protein_coding	family with sequence similarity 78, member B
chr1	166907036	166915547	+	166907354	166915547	A5SS	0.33	50	50	ENSMUST00000165874.8	ENSMUSG00000060568.15	Fam78b	chr1	protein_coding	family with sequence similarity 78, member B
chr1	166907036	166915547	+	166907034	166915547	A5SS	0.33	50	50	ENSMUST00000190081.7	ENSMUSG00000060568.15	Fam78b	chr1	protein_coding	family with sequence similarity 78, member B
chr1	167057559	167064172	-	167057559;167062403	167062261;167064172	ES	0.5	50	50	ENSMUST00000053686.9	ENSMUSG00000026558.14	Uck2	chr1	protein_coding	uridine-cytidine kinase 2
chr1	167065217;167107921	167107693;167112345	-	167065217	167112345	cassetteExon	0.5	100	100	ENSMUST00000053686.9	ENSMUSG00000026558.14	Uck2	chr1	protein_coding	uridine-cytidine kinase 2
chr1	167064268	167064349	-	167064268	167065058	A5SS	0.5	50	50	ENSMUST00000053686.9	ENSMUSG00000026558.14	Uck2	chr1	protein_coding	uridine-cytidine kinase 2
chr1	167065217	167070662	-	167065217	167112345	A5SS	0.2	50	50	ENSMUST00000053686.9	ENSMUSG00000026558.14	Uck2	chr1	protein_coding	uridine-cytidine kinase 2
chr1	167065217	167092270	-	167065217	167112345	A5SS	0.2	50	50	ENSMUST00000053686.9	ENSMUSG00000026558.14	Uck2	chr1	protein_coding	uridine-cytidine kinase 2
chr1	167065217	167112109	-	167065217	167112345	A5SS	0.2	50	50	ENSMUST00000053686.9	ENSMUSG00000026558.14	Uck2	chr1	protein_coding	uridine-cytidine kinase 2
chr1	167065217	167092270	-	167065217	167070662	5pMXE	0.2	50	50	ENSMUST00000027839.14	ENSMUSG00000026558.14	Uck2	chr1	protein_coding	uridine-cytidine kinase 2
chr1	167065217	167107693	-	167065217	167070662	5pMXE	0.2	50	50	ENSMUST00000027839.14	ENSMUSG00000026558.14	Uck2	chr1	protein_coding	uridine-cytidine kinase 2
chr1	167065217	167112109	-	167065217	167070662	5pMXE	0.2	50	50	ENSMUST00000027839.14	ENSMUSG00000026558.14	Uck2	chr1	protein_coding	uridine-cytidine kinase 2
chr1	167065217	167092270	-	167065217	167112109	A5SS	0.2	50	50	ENSMUST00000192269.3	ENSMUSG00000026558.14	Uck2	chr1	protein_coding	uridine-cytidine kinase 2
chr1	167065217	167107693	-	167065217	167112109	A5SS	0.2	50	50	ENSMUST00000192269.3	ENSMUSG00000026558.14	Uck2	chr1	protein_coding	uridine-cytidine kinase 2
chr1	167057559	167064172	-	167062403	167064172	3pMXE	0.5	50	50	ENSMUST00000191745.2	ENSMUSG00000026558.14	Uck2	chr1	protein_coding	uridine-cytidine kinase 2
chr1	167065217	167092270	-	167065217	167107693	A5SS	0.2	50	50	ENSMUST00000191745.2	ENSMUSG00000026558.14	Uck2	chr1	protein_coding	uridine-cytidine kinase 2
chr1	167143858	167153501	+	167143858	167146831	A3SS&ES	0.5	50	50	ENSMUST00000195015.6	ENSMUSG00000052428.11	Tmco1	chr1	protein_coding	transmembrane and coiled-coil domains 1
chr1	167136343	167136875	+	167136502	167136875	A5SS	0.5	50	50	ENSMUST00000195015.6	ENSMUSG00000052428.11	Tmco1	chr1	protein_coding	transmembrane and coiled-coil domains 1
chr1	167180234;167181607	167181486;167181996	+	167180234	167181996	cassetteExon	0.5	100	100	ENSMUST00000028004.11	ENSMUSG00000026687.15	Aldh9a1	chr1	protein_coding	aldehyde dehydrogenase 9, subfamily A1
chr1	167446064	167452497	+	167441520	167452497	A5SS	0.5	50	50	ENSMUST00000015987.10	ENSMUSG00000015843.11	Rxrg	chr1	protein_coding	retinoid X receptor gamma
chr1	168011188	168023317	-	168011188;168019006	168018847;168023317	ES	0.5	50	50	ENSMUST00000188912.7	ENSMUSG00000052534.16	Pbx1	chr1	protein_coding	pre B cell leukemia homeobox 1
chr1	168011188;168012637	168012525;168018847	-	168011188	168018847	cassetteExon	0.5	100	100	ENSMUST00000188912.7	ENSMUSG00000052534.16	Pbx1	chr1	protein_coding	pre B cell leukemia homeobox 1
chr1	167986393	168011099	-	167949049	168011099	A3SS	0.5	50	50	ENSMUST00000188912.7	ENSMUSG00000052534.16	Pbx1	chr1	protein_coding	pre B cell leukemia homeobox 1
chr1	167986393	167992189	-	167986393	168011099	A5SS	0.5	50	50	ENSMUST00000176540.8	ENSMUSG00000052534.16	Pbx1	chr1	protein_coding	pre B cell leukemia homeobox 1
chr1	168011188	168012525	-	168011188	168023317	A5SS	0.33	50	50	ENSMUST00000064438.11	ENSMUSG00000052534.16	Pbx1	chr1	protein_coding	pre B cell leukemia homeobox 1
chr1	169353018;169356380	169356305;169358891	-	169353018	169358891	cassetteExon	0.5	100	100	ENSMUST00000111368.8	ENSMUSG00000026683.15	Nuf2	chr1	protein_coding	NUF2, NDC80 kinetochore complex component
chr1	169342554	169344130	-	169339798	169344130	A3SS	0.5	50	50	ENSMUST00000195342.6	ENSMUSG00000026683.15	Nuf2	chr1	protein_coding	NUF2, NDC80 kinetochore complex component
chr1	169339798	169341014	-	169339798	169344130	A5SS	0.5	50	50	ENSMUST00000195342.6	ENSMUSG00000026683.15	Nuf2	chr1	protein_coding	NUF2, NDC80 kinetochore complex component
chr1	169353018	169358891	-	169356380	169358891	A3SS	0.5	50	50	ENSMUST00000194831.2	ENSMUSG00000026683.15	Nuf2	chr1	protein_coding	NUF2, NDC80 kinetochore complex component
chr1	169510385	169511066	+	169510385	169517985	A3SS	0.5	50	50	ENSMUST00000027997.9	ENSMUSG00000026678.11	Rgs5	chr1	protein_coding	regulator of G-protein signaling 5
chr1	169571489	169572244	-	169571489;169572086	169571920;169572244	ES	0.5	50	50	ENSMUST00000027991.12	ENSMUSG00000038530.12	Rgs4	chr1	protein_coding	regulator of G-protein signaling 4
chr1	169571489	169572244	-	169571489	169571920	A5SS	0.5	50	50	ENSMUST00000132567.2	ENSMUSG00000038530.12	Rgs4	chr1	protein_coding	regulator of G-protein signaling 4
chr1	169757729	169760561	+	169757729	169760564	A3SS	0.5	50	50	ENSMUST00000094348.4	ENSMUSG00000070532.6	Ccdc190	chr1	protein_coding	coiled-coil domain containing 190
chr1	169783602	169787256	-	169783602;169787048	169786992;169787256	ES	0.5	50	50	ENSMUST00000027989.13	ENSMUSG00000026675.13	Hsd17b7	chr1	protein_coding	hydroxysteroid (17-beta) dehydrogenase 7
chr1	169793348	169793661	-	169793348	169794799	A5SS	0.5	50	50	ENSMUST00000027989.13	ENSMUSG00000026675.13	Hsd17b7	chr1	protein_coding	hydroxysteroid (17-beta) dehydrogenase 7
chr1	169783602	169787256	-	169787048	169787256	3pMXE	0.5	50	50	ENSMUST00000123230.2	ENSMUSG00000026675.13	Hsd17b7	chr1	protein_coding	hydroxysteroid (17-beta) dehydrogenase 7
chr1	169797144	169798039	+	169797144	169798019	A3SS	0.5	50	50	ENSMUST00000180638.3	ENSMUSG00000097503.3	3110045C21Rik	chr1	lncRNA	RIKEN cDNA 3110045C21 gene
chr1	169916513	169938191	-	169916513	169937831	5pMXE	0.25	50	50	ENSMUST00000194690.6	ENSMUSG00000026674.10	Ddr2	chr1	protein_coding	discoidin domain receptor family, member 2
chr1	169863590;169868157	169868056;169916364	-	169863590	169916364	cassetteExon	0.5	100	100	ENSMUST00000194690.6	ENSMUSG00000026674.10	Ddr2	chr1	protein_coding	discoidin domain receptor family, member 2
chr1	169911397	169916364	-	169863590	169916364	A3SS	0.33	50	50	ENSMUST00000194690.6	ENSMUSG00000026674.10	Ddr2	chr1	protein_coding	discoidin domain receptor family, member 2
chr1	169916513	169924803	-	169916513	169937831	A5SS	0.25	50	50	ENSMUST00000194690.6	ENSMUSG00000026674.10	Ddr2	chr1	protein_coding	discoidin domain receptor family, member 2
chr1	169916513	169937936	-	169916513	169937831	A5SS	0.25	50	50	ENSMUST00000194690.6	ENSMUSG00000026674.10	Ddr2	chr1	protein_coding	discoidin domain receptor family, member 2
chr1	169916513	169938191	-	169916513	169937936	5pMXE	0.25	50	50	ENSMUST00000027985.8	ENSMUSG00000026674.10	Ddr2	chr1	protein_coding	discoidin domain receptor family, member 2
chr1	169916513	169924803	-	169916513	169937936	A5SS	0.25	50	50	ENSMUST00000027985.8	ENSMUSG00000026674.10	Ddr2	chr1	protein_coding	discoidin domain receptor family, member 2
chr1	169916513	169924803	-	169916513	169938191	A5SS	0.25	50	50	ENSMUST00000192312.6	ENSMUSG00000026674.10	Ddr2	chr1	protein_coding	discoidin domain receptor family, member 2
chr1	169911397	169916364	-	169868157	169916364	A3SS	0.33	50	50	ENSMUST00000195867.6	ENSMUSG00000026674.10	Ddr2	chr1	protein_coding	discoidin domain receptor family, member 2
chr1	169971032;169975612	169975565;169976840	-	169971032	169976840	cassetteExon	0.5	100	100	ENSMUST00000111350.10	ENSMUSG00000026670.16	Uap1	chr1	protein_coding	UDP-N-acetylglucosamine pyrophosphorylase 1
chr1	169971032;169975615	169975565;169976840	-	169971032	169976840	cassetteExon	0.5	100	100	ENSMUST00000111350.10	ENSMUSG00000026670.16	Uap1	chr1	protein_coding	UDP-N-acetylglucosamine pyrophosphorylase 1
chr1	169989009	169994195	-	169989140	169994195	A3SS	0.5	50	50	ENSMUST00000111350.10	ENSMUSG00000026670.16	Uap1	chr1	protein_coding	UDP-N-acetylglucosamine pyrophosphorylase 1
chr1	169997554	170002319	-	169994517	170002319	A3SS	0.5	50	50	ENSMUST00000111350.10	ENSMUSG00000026670.16	Uap1	chr1	protein_coding	UDP-N-acetylglucosamine pyrophosphorylase 1
chr1	169989140	169989308	-	169989140	169994195	A5SS	0.5	50	50	ENSMUST00000111350.10	ENSMUSG00000026670.16	Uap1	chr1	protein_coding	UDP-N-acetylglucosamine pyrophosphorylase 1
chr1	169975612	169976840	-	169975615	169976840	A3SS	0.33	50	50	ENSMUST00000111351.10	ENSMUSG00000026670.16	Uap1	chr1	protein_coding	UDP-N-acetylglucosamine pyrophosphorylase 1
chr1	170027582	170034683	-	170027582;170032772	170032684;170034683	ES	0.5	50	50	ENSMUST00000150821.8	ENSMUSG00000026667.15	Uhmk1	chr1	protein_coding	U2AF homology motif (UHM) kinase 1
chr1	170040097	170042542	-	170040097	170042067	5pMXE	0.5	50	50	ENSMUST00000150821.8	ENSMUSG00000026667.15	Uhmk1	chr1	protein_coding	U2AF homology motif (UHM) kinase 1
chr1	170060573	170077598	+	170060573;170075765	170075702;170077598	ES	0.5	50	50	ENSMUST00000162752.2	ENSMUSG00000073494.6	Sh2d1b2	chr1	protein_coding	SH2 domain containing 1B2
chr1	170130407	170146307	-	170130407	170133846	5pMXE	0.5	50	50	ENSMUST00000179801.3	ENSMUSG00000102752.2	Gm7694	chr1	protein_coding	predicted gene 7694
chr1	170148156	170151480	-	170148156	170155087	A5SS	0.5	50	50	ENSMUST00000161221.8	ENSMUSG00000038473.15	Nos1ap	chr1	protein_coding	nitric oxide synthase 1 (neuronal) adaptor protein
chr1	170202890	170218300	-	170202875	170218300	A3SS	0.5	50	50	ENSMUST00000160456.8	ENSMUSG00000038473.15	Nos1ap	chr1	protein_coding	nitric oxide synthase 1 (neuronal) adaptor protein
chr1	170218392	170282372	-	170218392	170342184	A5SS	0.5	50	50	ENSMUST00000160456.8	ENSMUSG00000038473.15	Nos1ap	chr1	protein_coding	nitric oxide synthase 1 (neuronal) adaptor protein
chr1	170342255	170384273	-	170342255	170416829	A5SS	0.5	50	50	ENSMUST00000160456.8	ENSMUSG00000038473.15	Nos1ap	chr1	protein_coding	nitric oxide synthase 1 (neuronal) adaptor protein
chr1	170702139	170707699	-	170702139;170707415	170707229;170707699	ES	0.5	50	50	ENSMUST00000170420.8	ENSMUSG00000026659.14	Dusp12	chr1	protein_coding	dual specificity phosphatase 12
chr1	170707795;170708260	170708142;170708484	-	170707795	170708484	cassetteExon	0.5	100	100	ENSMUST00000170420.8	ENSMUSG00000026659.14	Dusp12	chr1	protein_coding	dual specificity phosphatase 12
chr1	170708597	170712636	-	170708610	170712636	A3SS	0.5	50	50	ENSMUST00000170420.8	ENSMUSG00000026659.14	Dusp12	chr1	protein_coding	dual specificity phosphatase 12
chr1	170708597	170712477	-	170708597	170712636	A5SS	0.5	50	50	ENSMUST00000171447.8	ENSMUSG00000026659.14	Dusp12	chr1	protein_coding	dual specificity phosphatase 12
chr1	170707795	170708484	-	170708260	170708484	3pMXE	0.5	50	50	ENSMUST00000172042.2	ENSMUSG00000026659.14	Dusp12	chr1	protein_coding	dual specificity phosphatase 12
chr1	170748553	170749087	-	170748687	170749087	A3SS	0.5	50	50	ENSMUST00000046322.14	ENSMUSG00000038421.14	Fcrla	chr1	protein_coding	Fc receptor-like A
chr1	170749275	170749791	-	170749353	170749791	A3SS	0.5	50	50	ENSMUST00000046322.14	ENSMUSG00000038421.14	Fcrla	chr1	protein_coding	Fc receptor-like A
chr1	170749973	170755031	-	170749976	170755031	A3SS	0.5	50	50	ENSMUST00000046322.14	ENSMUSG00000038421.14	Fcrla	chr1	protein_coding	Fc receptor-like A
chr1	170749976	170754965	-	170749976	170755031	A5SS	0.5	50	50	ENSMUST00000046322.14	ENSMUSG00000038421.14	Fcrla	chr1	protein_coding	Fc receptor-like A
chr1	170749973	170754965	-	170749973	170755031	A5SS	0.5	50	50	ENSMUST00000159171.2	ENSMUSG00000038421.14	Fcrla	chr1	protein_coding	Fc receptor-like A
chr1	170749973	170754965	-	170749976	170754965	A3SS	0.5	50	50	ENSMUST00000162887.2	ENSMUSG00000038421.14	Fcrla	chr1	protein_coding	Fc receptor-like A
chr1	170788802	170793271	-	170788802;170791034	170790894;170793271	ES	0.5	50	50	ENSMUST00000027966.14	ENSMUSG00000026656.16	Fcgr2b	chr1	protein_coding	Fc receptor, IgG, low affinity IIb
chr1	170788802	170790978	-	170788802	170790894	A5SS	0.33	50	50	ENSMUST00000027966.14	ENSMUSG00000026656.16	Fcgr2b	chr1	protein_coding	Fc receptor, IgG, low affinity IIb
chr1	170788802;170791034	170790978;170793271	-	170788802	170793271	cassetteExon	0.5	100	100	ENSMUST00000081103.12	ENSMUSG00000026656.16	Fcgr2b	chr1	protein_coding	Fc receptor, IgG, low affinity IIb
chr1	170885514	170886155	-	170885517	170886155	A3SS	0.5	50	50	ENSMUST00000164044.8	ENSMUSG00000059498.14	Fcgr3	chr1	protein_coding	Fc receptor, IgG, low affinity III
chr1	170941665;170950762	170950615;170952603	+	170941665	170952603	cassetteExon	0.5	100	100	ENSMUST00000129651.8	ENSMUSG00000026649.15	Cfap126	chr1	protein_coding	cilia and flagella associated protein 126
chr1	170952919;170953462	170953276;170953603	+	170952919	170953603	cassetteExon	0.5	100	100	ENSMUST00000129651.8	ENSMUSG00000026649.15	Cfap126	chr1	protein_coding	cilia and flagella associated protein 126
chr1	170952919;170953462	170953352;170953603	+	170952919	170953603	cassetteExon	0.5	100	100	ENSMUST00000129651.8	ENSMUSG00000026649.15	Cfap126	chr1	protein_coding	cilia and flagella associated protein 126
chr1	170952919	170953492	+	170952919	170953603	A3SS	0.25	50	50	ENSMUST00000129651.8	ENSMUSG00000026649.15	Cfap126	chr1	protein_coding	cilia and flagella associated protein 126
chr1	170949390	170950615	+	170941665	170950615	A5SS	0.33	50	50	ENSMUST00000151340.8	ENSMUSG00000026649.15	Cfap126	chr1	protein_coding	cilia and flagella associated protein 126
chr1	170950531	170950615	+	170941665	170950615	A5SS	0.33	50	50	ENSMUST00000151340.8	ENSMUSG00000026649.15	Cfap126	chr1	protein_coding	cilia and flagella associated protein 126
chr1	170949390;170950531	170950449;170950615	+	170949390	170950615	cassetteExon	0.5	100	100	ENSMUST00000027959.11	ENSMUSG00000026649.15	Cfap126	chr1	protein_coding	cilia and flagella associated protein 126
chr1	170949390	170950615	+	170949390	170950449	A3SS&ES	0.5	50	50	ENSMUST00000148200.2	ENSMUSG00000026649.15	Cfap126	chr1	protein_coding	cilia and flagella associated protein 126
chr1	170950531	170950615	+	170950531	170950617	A3SS	0.5	50	50	ENSMUST00000148200.2	ENSMUSG00000026649.15	Cfap126	chr1	protein_coding	cilia and flagella associated protein 126
chr1	170949390	170950615	+	170950531	170950615	5pMXE	0.33	50	50	ENSMUST00000127394.8	ENSMUSG00000026649.15	Cfap126	chr1	protein_coding	cilia and flagella associated protein 126
chr1	170941665	170952603	+	170950762	170952603	5pMXE	0.5	50	50	ENSMUST00000143623.8	ENSMUSG00000026649.15	Cfap126	chr1	protein_coding	cilia and flagella associated protein 126
chr1	170952919	170953276	+	170952919	170953492	A3SS	0.25	50	50	ENSMUST00000143623.8	ENSMUSG00000026649.15	Cfap126	chr1	protein_coding	cilia and flagella associated protein 126
chr1	170952919	170953352	+	170952919	170953492	A3SS	0.25	50	50	ENSMUST00000143623.8	ENSMUSG00000026649.15	Cfap126	chr1	protein_coding	cilia and flagella associated protein 126
chr1	170952919	170953352	+	170952919	170953276	A3SS	0.25	50	50	ENSMUST00000156789.8	ENSMUSG00000026649.15	Cfap126	chr1	protein_coding	cilia and flagella associated protein 126
chr1	170966324	170973325	-	170966324;170971228	170971127;170973325	ES	0.5	50	50	ENSMUST00000111336.10	ENSMUSG00000058076.13	Sdhc	chr1	protein_coding	succinate dehydrogenase complex, subunit C, integral membrane protein
chr1	170973381	170978049	-	170973381	170978128	A5SS	0.5	50	50	ENSMUST00000111336.10	ENSMUSG00000058076.13	Sdhc	chr1	protein_coding	succinate dehydrogenase complex, subunit C, integral membrane protein
chr1	170987202	170987518	+	170987202	170987343	A3SS&ES	0.5	50	50	ENSMUST00000070758.10	ENSMUSG00000056569.12	Mpz	chr1	protein_coding	myelin protein zero
chr1	171042054	171043948	+	171042054;171042643	171042513;171043948	ES	0.33	50	50	ENSMUST00000005820.11	ENSMUSG00000005677.15	Nr1i3	chr1	protein_coding	nuclear receptor subfamily 1, group I, member 3
chr1	171044999	171046158	+	171044999;171045300	171045195;171046158	ES	0.5	50	50	ENSMUST00000005820.11	ENSMUSG00000005677.15	Nr1i3	chr1	protein_coding	nuclear receptor subfamily 1, group I, member 3
chr1	171044790	171044886	+	171044790	171044883	A3SS	0.5	50	50	ENSMUST00000005820.11	ENSMUSG00000005677.15	Nr1i3	chr1	protein_coding	nuclear receptor subfamily 1, group I, member 3
chr1	171041742;171042054	171041912;171043948	+	171041742	171043948	cassetteExon	0.5	100	100	ENSMUST00000155126.8	ENSMUSG00000005677.15	Nr1i3	chr1	protein_coding	nuclear receptor subfamily 1, group I, member 3
chr1	171042643	171043948	+	171041742	171043948	A5SS	0.33	50	50	ENSMUST00000155126.8	ENSMUSG00000005677.15	Nr1i3	chr1	protein_coding	nuclear receptor subfamily 1, group I, member 3
chr1	171044999	171046158	+	171045300	171046158	A5SS	0.5	50	50	ENSMUST00000133075.8	ENSMUSG00000005677.15	Nr1i3	chr1	protein_coding	nuclear receptor subfamily 1, group I, member 3
chr1	171048221	171048737	-	171048221;171048475	171048374;171048737	ES	0.5	50	50	ENSMUST00000005817.9	ENSMUSG00000005674.10	Tomm40l	chr1	protein_coding	translocase of outer mitochondrial membrane 40-like
chr1	171049594	171049944	-	171049722	171049944	A3SS	0.33	50	50	ENSMUST00000005817.9	ENSMUSG00000005674.10	Tomm40l	chr1	protein_coding	translocase of outer mitochondrial membrane 40-like
chr1	171049622	171049944	-	171049722	171049944	A3SS	0.33	50	50	ENSMUST00000005817.9	ENSMUSG00000005674.10	Tomm40l	chr1	protein_coding	translocase of outer mitochondrial membrane 40-like
chr1	171048221;171049208	171048737;171049473	-	171048221	171049473	cassetteExon	0.5	100	100	ENSMUST00000143405.2	ENSMUSG00000005674.10	Tomm40l	chr1	protein_coding	translocase of outer mitochondrial membrane 40-like
chr1	171048221	171048374	-	171048221	171049473	A5SS	0.33	50	50	ENSMUST00000143405.2	ENSMUSG00000005674.10	Tomm40l	chr1	protein_coding	translocase of outer mitochondrial membrane 40-like
chr1	171048221	171048737	-	171048475	171048737	3pMXE	0.5	50	50	ENSMUST00000138184.8	ENSMUSG00000005674.10	Tomm40l	chr1	protein_coding	translocase of outer mitochondrial membrane 40-like
chr1	171049594	171049944	-	171049622	171049944	A3SS	0.33	50	50	ENSMUST00000138184.8	ENSMUSG00000005674.10	Tomm40l	chr1	protein_coding	translocase of outer mitochondrial membrane 40-like
chr1	171048221	171049473	-	171049208	171049473	3pMXE	0.5	50	50	ENSMUST00000130529.2	ENSMUSG00000005674.10	Tomm40l	chr1	protein_coding	translocase of outer mitochondrial membrane 40-like
chr1	171052690	171052837	+	171052690	171052856	A3SS	0.25	50	50	ENSMUST00000111321.8	ENSMUSG00000005681.13	Apoa2	chr1	protein_coding	apolipoprotein A-II
chr1	171052690	171052853	+	171052690	171052856	A3SS	0.25	50	50	ENSMUST00000111321.8	ENSMUSG00000005681.13	Apoa2	chr1	protein_coding	apolipoprotein A-II
chr1	171052690	171052868	+	171052690	171052856	A3SS	0.25	50	50	ENSMUST00000111321.8	ENSMUSG00000005681.13	Apoa2	chr1	protein_coding	apolipoprotein A-II
chr1	171052690	171052837	+	171052690	171052853	A3SS	0.25	50	50	ENSMUST00000005824.12	ENSMUSG00000005681.13	Apoa2	chr1	protein_coding	apolipoprotein A-II
chr1	171052690	171052868	+	171052690	171052853	A3SS	0.25	50	50	ENSMUST00000005824.12	ENSMUSG00000005681.13	Apoa2	chr1	protein_coding	apolipoprotein A-II
chr1	171052690	171052837	+	171052690	171052868	A3SS	0.25	50	50	ENSMUST00000111320.8	ENSMUSG00000005681.13	Apoa2	chr1	protein_coding	apolipoprotein A-II
chr1	171057656	171058491	-	171057656	171058565	A5SS	0.5	50	50	ENSMUST00000079957.12	ENSMUSG00000058715.12	Fcer1g	chr1	protein_coding	Fc receptor, IgE, high affinity I, gamma polypeptide
chr1	171064838	171065514	-	171064838	171065039	5pMXE	0.5	50	50	ENSMUST00000150108.8	ENSMUSG00000013593.13	Ndufs2	chr1	protein_coding	NADH:ubiquinone oxidoreductase core subunit S2
chr1	171065941	171066279	-	171065941;171066161	171066084;171066279	ES	0.5	50	50	ENSMUST00000013737.13	ENSMUSG00000013593.13	Ndufs2	chr1	protein_coding	NADH:ubiquinone oxidoreductase core subunit S2
chr1	171073766	171078787	-	171073766	171074563	5pMXE	0.5	50	50	ENSMUST00000013737.13	ENSMUSG00000013593.13	Ndufs2	chr1	protein_coding	NADH:ubiquinone oxidoreductase core subunit S2
chr1	171066963	171067597	-	171066963	171068516	A5SS	0.5	50	50	ENSMUST00000013737.13	ENSMUSG00000013593.13	Ndufs2	chr1	protein_coding	NADH:ubiquinone oxidoreductase core subunit S2
chr1	171065941	171066279	-	171066161	171066279	3pMXE	0.5	50	50	ENSMUST00000194778.6	ENSMUSG00000013593.13	Ndufs2	chr1	protein_coding	NADH:ubiquinone oxidoreductase core subunit S2
chr1	171068706	171078787	-	171068706;171073766	171073660;171078787	ES	0.5	50	50	ENSMUST00000194778.6	ENSMUSG00000013593.13	Ndufs2	chr1	protein_coding	NADH:ubiquinone oxidoreductase core subunit S2
chr1	171097984;171098259	171098153;171098773	+	171097984	171098773	cassetteExon	0.5	100	100	ENSMUST00000064272.10	ENSMUSG00000052423.16	B4galt3	chr1	protein_coding	UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3
chr1	171097984;171098675	171098562;171098773	+	171097984	171098773	cassetteExon	0.5	100	100	ENSMUST00000064272.10	ENSMUSG00000052423.16	B4galt3	chr1	protein_coding	UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3
chr1	171098943	171099398	+	171098943	171099277	A3SS	0.33	50	50	ENSMUST00000064272.10	ENSMUSG00000052423.16	B4galt3	chr1	protein_coding	UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3
chr1	171098943	171099480	+	171098943	171099277	A3SS	0.33	50	50	ENSMUST00000064272.10	ENSMUSG00000052423.16	B4galt3	chr1	protein_coding	UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3
chr1	171098943	171099480	+	171098943	171099398	A3SS	0.33	50	50	ENSMUST00000151863.8	ENSMUSG00000052423.16	B4galt3	chr1	protein_coding	UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3
chr1	171097984;171098675	171098562;171098773	+	171097984;171098259	171098153;171098773	MXE	0.5	100	100	ENSMUST00000141999.8	ENSMUSG00000052423.16	B4galt3	chr1	protein_coding	UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3
chr1	171097984	171098773	+	171098259	171098773	A5SS	0.33	50	50	ENSMUST00000138904.2	ENSMUSG00000052423.16	B4galt3	chr1	protein_coding	UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3
chr1	171098675	171098773	+	171098259	171098773	A5SS	0.33	50	50	ENSMUST00000138904.2	ENSMUSG00000052423.16	B4galt3	chr1	protein_coding	UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3
chr1	171097984	171098773	+	171098675	171098773	5pMXE	0.33	50	50	ENSMUST00000125939.2	ENSMUSG00000052423.16	B4galt3	chr1	protein_coding	UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3
chr1	171107167	171107714	-	171107575	171107714	A3SS&ES	0.5	50	50	ENSMUST00000073120.11	ENSMUSG00000062729.13	Ppox	chr1	protein_coding	protoporphyrinogen oxidase
chr1	171107862	171107962	-	171107829	171107962	A3SS	0.5	50	50	ENSMUST00000073120.11	ENSMUSG00000062729.13	Ppox	chr1	protein_coding	protoporphyrinogen oxidase
chr1	171107829	171107933	-	171107829	171107962	A5SS	0.5	50	50	ENSMUST00000073120.11	ENSMUSG00000062729.13	Ppox	chr1	protein_coding	protoporphyrinogen oxidase
chr1	171110185;171110555	171110448;171110928	-	171110185;171110667	171110269;171110928	MXE	0.5	100	100	ENSMUST00000065941.12	ENSMUSG00000053483.16	Usp21	chr1	protein_coding	ubiquitin specific peptidase 21
chr1	171114673	171115335	-	171114543	171115335	A3SS	0.5	50	50	ENSMUST00000065941.12	ENSMUSG00000053483.16	Usp21	chr1	protein_coding	ubiquitin specific peptidase 21
chr1	171113174	171114184	-	171113174	171113923	A5SS	0.5	50	50	ENSMUST00000065941.12	ENSMUSG00000053483.16	Usp21	chr1	protein_coding	ubiquitin specific peptidase 21
chr1	171110667	171110928	-	171110555	171110928	A3SS	0.5	50	50	ENSMUST00000149187.8	ENSMUSG00000053483.16	Usp21	chr1	protein_coding	ubiquitin specific peptidase 21
chr1	171110185	171110269	-	171110185	171110448	A5SS	0.5	50	50	ENSMUST00000149187.8	ENSMUSG00000053483.16	Usp21	chr1	protein_coding	ubiquitin specific peptidase 21
chr1	171116544	171117091	-	171116544;171116834	171116744;171117091	ES	0.5	50	50	ENSMUST00000080001.9	ENSMUSG00000062963.11	Ufc1	chr1	protein_coding	ubiquitin-fold modifier conjugating enzyme 1
chr1	171117167	171117428	-	171117167	171117457	A5SS	0.5	50	50	ENSMUST00000080001.9	ENSMUSG00000062963.11	Ufc1	chr1	protein_coding	ubiquitin-fold modifier conjugating enzyme 1
chr1	171116544	171117091	-	171116544	171116744	A5SS	0.5	50	50	ENSMUST00000138974.2	ENSMUSG00000062963.11	Ufc1	chr1	protein_coding	ubiquitin-fold modifier conjugating enzyme 1
chr1	171157094	171165820	+	171157094;171158853	171158821;171165820	ES	0.2	50	50	ENSMUST00000111300.8	ENSMUSG00000013973.13	Dedd	chr1	protein_coding	death effector domain-containing
chr1	171157094	171158802	+	171157094	171158821	A3SS	0.33	50	50	ENSMUST00000111300.8	ENSMUSG00000013973.13	Dedd	chr1	protein_coding	death effector domain-containing
chr1	171157260	171158821	+	171157094	171158821	A5SS	0.33	50	50	ENSMUST00000111300.8	ENSMUSG00000013973.13	Dedd	chr1	protein_coding	death effector domain-containing
chr1	171157260	171165820	+	171158853	171165820	A5SS&ES	0.2	50	50	ENSMUST00000111300.8	ENSMUSG00000013973.13	Dedd	chr1	protein_coding	death effector domain-containing
chr1	171157719	171165820	+	171158853	171165820	A5SS&ES	0.2	50	50	ENSMUST00000111300.8	ENSMUSG00000013973.13	Dedd	chr1	protein_coding	death effector domain-containing
chr1	171158175	171158821	+	171157094	171158821	A5SS	0.33	50	50	ENSMUST00000111300.8	ENSMUSG00000013973.13	Dedd	chr1	protein_coding	death effector domain-containing
chr1	171159166	171165820	+	171158853	171165820	A5SS	0.2	50	50	ENSMUST00000111300.8	ENSMUSG00000013973.13	Dedd	chr1	protein_coding	death effector domain-containing
chr1	171157094	171165820	+	171157094;171158853	171158802;171165820	ES	0.2	50	50	ENSMUST00000111299.8	ENSMUSG00000013973.13	Dedd	chr1	protein_coding	death effector domain-containing
chr1	171157094;171159166	171158802;171165820	+	171157094	171165820	cassetteExon	0.5	100	100	ENSMUST00000064950.11	ENSMUSG00000013973.13	Dedd	chr1	protein_coding	death effector domain-containing
chr1	171157094;171159166	171158821;171165820	+	171157094	171165820	cassetteExon	0.5	100	100	ENSMUST00000064950.11	ENSMUSG00000013973.13	Dedd	chr1	protein_coding	death effector domain-containing
chr1	171157260	171165820	+	171157094	171165820	A5SS	0.2	50	50	ENSMUST00000064950.11	ENSMUSG00000013973.13	Dedd	chr1	protein_coding	death effector domain-containing
chr1	171157719	171165820	+	171157094	171165820	A5SS	0.2	50	50	ENSMUST00000064950.11	ENSMUSG00000013973.13	Dedd	chr1	protein_coding	death effector domain-containing
chr1	171157260	171165820	+	171157260;171158853	171158821;171165820	ES	0.25	50	50	ENSMUST00000142063.8	ENSMUSG00000013973.13	Dedd	chr1	protein_coding	death effector domain-containing
chr1	171158175	171158821	+	171157260	171158821	A5SS	0.33	50	50	ENSMUST00000142063.8	ENSMUSG00000013973.13	Dedd	chr1	protein_coding	death effector domain-containing
chr1	171157260;171159166	171158821;171165820	+	171157260	171165820	cassetteExon	0.5	100	100	ENSMUST00000129116.8	ENSMUSG00000013973.13	Dedd	chr1	protein_coding	death effector domain-containing
chr1	171157719	171165820	+	171157260	171165820	A5SS	0.2	50	50	ENSMUST00000129116.8	ENSMUSG00000013973.13	Dedd	chr1	protein_coding	death effector domain-containing
chr1	171159166	171165820	+	171157719	171165820	A5SS	0.2	50	50	ENSMUST00000135150.2	ENSMUSG00000013973.13	Dedd	chr1	protein_coding	death effector domain-containing
chr1	171157094	171165820	+	171159166	171165820	5pMXE	0.2	50	50	ENSMUST00000097467.8	ENSMUSG00000013973.13	Dedd	chr1	protein_coding	death effector domain-containing
chr1	171157260	171165820	+	171159166	171165820	5pMXE	0.2	50	50	ENSMUST00000097467.8	ENSMUSG00000013973.13	Dedd	chr1	protein_coding	death effector domain-containing
chr1	171166205	171171006	-	171166205;171168691	171168581;171171006	ES	0.33	50	50	ENSMUST00000146428.8	ENSMUSG00000013997.11	Nit1	chr1	protein_coding	nitrilase 1
chr1	171171395;171171735	171171632;171171856	-	171171395	171171856	cassetteExon	0.5	100	100	ENSMUST00000146428.8	ENSMUSG00000013997.11	Nit1	chr1	protein_coding	nitrilase 1
chr1	171170365	171171006	-	171168691	171171006	A3SS	0.33	50	50	ENSMUST00000146428.8	ENSMUSG00000013997.11	Nit1	chr1	protein_coding	nitrilase 1
chr1	171172568;171172880	171172759;171173136	-	171172568	171173136	cassetteExon	0.5	100	100	ENSMUST00000111296.8	ENSMUSG00000013997.11	Nit1	chr1	protein_coding	nitrilase 1
chr1	171170365	171171006	-	171166205	171171006	A3SS	0.33	50	50	ENSMUST00000111296.8	ENSMUSG00000013997.11	Nit1	chr1	protein_coding	nitrilase 1
chr1	171172568	171173104	-	171172568	171173136	A5SS	0.33	50	50	ENSMUST00000111296.8	ENSMUSG00000013997.11	Nit1	chr1	protein_coding	nitrilase 1
chr1	171172568	171172759	-	171172568	171173104	A5SS	0.33	50	50	ENSMUST00000111289.8	ENSMUSG00000013997.11	Nit1	chr1	protein_coding	nitrilase 1
chr1	171171395	171171856	-	171171395	171171632	A5SS	0.5	50	50	ENSMUST00000141357.2	ENSMUSG00000013997.11	Nit1	chr1	protein_coding	nitrilase 1
chr1	171172568	171173136	-	171172568	171172759	A5SS	0.33	50	50	ENSMUST00000156856.8	ENSMUSG00000013997.11	Nit1	chr1	protein_coding	nitrilase 1
chr1	171171395	171171856	-	171171735	171171856	3pMXE	0.5	50	50	ENSMUST00000136339.2	ENSMUSG00000013997.11	Nit1	chr1	protein_coding	nitrilase 1
chr1	171184396	171185356	+	171184396	171185418	A3SS	0.5	50	50	ENSMUST00000135941.8	ENSMUSG00000006412.11	Pfdn2	chr1	protein_coding	prefoldin 2
chr1	171213306	171214149	+	171213306;171213802	171213728;171214149	ES	0.5	50	50	ENSMUST00000111286.9	ENSMUSG00000006411.13	Nectin4	chr1	protein_coding	nectin cell adhesion molecule 4
chr1	171239008	171242005	+	171239008	171241941	A3SS	0.5	50	50	ENSMUST00000159207.8	ENSMUSG00000026641.14	Usf1	chr1	protein_coding	upstream transcription factor 1
chr1	171243122	171243259	+	171243122	171243283	A3SS	0.5	50	50	ENSMUST00000159207.8	ENSMUSG00000026641.14	Usf1	chr1	protein_coding	upstream transcription factor 1
chr1	171243367	171243703	+	171243398	171243703	A5SS	0.5	50	50	ENSMUST00000159207.8	ENSMUSG00000026641.14	Usf1	chr1	protein_coding	upstream transcription factor 1
chr1	171239430	171242005	+	171239008	171242005	A5SS	0.5	50	50	ENSMUST00000001284.13	ENSMUSG00000026641.14	Usf1	chr1	protein_coding	upstream transcription factor 1
chr1	171246703	171246906	+	171246536	171246906	A5SS	0.5	50	50	ENSMUST00000193060.2	ENSMUSG00000103711.2	Tstd1	chr1	protein_coding	thiosulfate sulfurtransferase (rhodanese)-like domain containing 1
chr1	171358182	171359074	-	171358182;171358760	171358602;171359074	ES	0.5	50	50	ENSMUST00000043094.13	ENSMUSG00000038209.13	Itln1	chr1	protein_coding	intelectin 1 (galactofuranose binding)
chr1	171405537	171406667	+	171405537	171436018	A3SS	0.5	50	50	ENSMUST00000194797.2	ENSMUSG00000004709.15	Cd244a	chr1	protein_coding	CD244 molecule A
chr1	171429630	171434768	-	171429630;171432887	171432558;171434768	ES	0.5	50	50	ENSMUST00000068878.14	ENSMUSG00000004707.15	Ly9	chr1	protein_coding	lymphocyte antigen 9
chr1	171419353	171420991	-	171416693	171420991	A3SS	0.5	50	50	ENSMUST00000068878.14	ENSMUSG00000004707.15	Ly9	chr1	protein_coding	lymphocyte antigen 9
chr1	171432887	171434676	-	171432887	171434768	A5SS	0.5	50	50	ENSMUST00000068878.14	ENSMUSG00000004707.15	Ly9	chr1	protein_coding	lymphocyte antigen 9
chr1	171429630	171434768	-	171429630	171432558	A5SS&ES	0.5	50	50	ENSMUST00000143463.8	ENSMUSG00000004707.15	Ly9	chr1	protein_coding	lymphocyte antigen 9
chr1	171463942	171466231	-	171463942;171464968	171464865;171466231	ES	0.5	50	50	ENSMUST00000192195.6	ENSMUSG00000038179.14	Slamf7	chr1	protein_coding	SLAM family member 7
chr1	171523534;171527218	171526952;171532366	+	171523534	171532366	cassetteExon	0.5	100	100	ENSMUST00000015499.14	ENSMUSG00000015355.14	Cd48	chr1	protein_coding	CD48 antigen
chr1	171668270	171700264	+	171668270;171679702	171679370;171700264	ES	0.5	50	50	ENSMUST00000155802.9	ENSMUSG00000038147.15	Cd84	chr1	protein_coding	CD84 antigen
chr1	171701006	171712155	+	171701006	171712152	A3SS	0.5	50	50	ENSMUST00000155802.9	ENSMUSG00000038147.15	Cd84	chr1	protein_coding	CD84 antigen
chr1	171668270	171700264	+	171668270	171679370	3pMXE	0.5	50	50	ENSMUST00000135386.2	ENSMUSG00000038147.15	Cd84	chr1	protein_coding	CD84 antigen
chr1	171742605	171746819	-	171739040	171746819	A3SS	0.33	50	50	ENSMUST00000192498.2	ENSMUSG00000104413.2	Gm37065	chr1	lncRNA	predicted gene, 37065
chr1	171742609	171746819	-	171739040	171746819	A3SS	0.33	50	50	ENSMUST00000192498.2	ENSMUSG00000104413.2	Gm37065	chr1	lncRNA	predicted gene, 37065
chr1	171742605	171746819	-	171742609	171746819	A3SS	0.5	50	50	ENSMUST00000192000.2	ENSMUSG00000104413.2	Gm37065	chr1	lncRNA	predicted gene, 37065
chr1	171741190	171742367	-	171741190	171742277	A5SS	0.5	50	50	ENSMUST00000192000.2	ENSMUSG00000104413.2	Gm37065	chr1	lncRNA	predicted gene, 37065
chr1	171767036	171775566	+	171767036;171769263	171769192;171775566	ES	0.33	50	50	ENSMUST00000195656.6	ENSMUSG00000015314.11	Slamf6	chr1	protein_coding	SLAM family member 6
chr1	171769263;171770396	171770145;171775566	+	171769263	171775566	cassetteExon	0.5	100	100	ENSMUST00000195656.6	ENSMUSG00000015314.11	Slamf6	chr1	protein_coding	SLAM family member 6
chr1	171747363	171761666	+	171745359	171761666	A5SS	0.5	50	50	ENSMUST00000195656.6	ENSMUSG00000015314.11	Slamf6	chr1	protein_coding	SLAM family member 6
chr1	171769263	171775566	+	171769263	171770145	3pMXE	0.5	50	50	ENSMUST00000171330.7	ENSMUSG00000015314.11	Slamf6	chr1	protein_coding	SLAM family member 6
chr1	171770396	171775566	+	171767036	171775566	A5SS	0.33	50	50	ENSMUST00000194561.2	ENSMUSG00000015314.11	Slamf6	chr1	protein_coding	SLAM family member 6
chr1	171769263	171775566	+	171770396	171775566	5pMXE	0.33	50	50	ENSMUST00000195206.2	ENSMUSG00000015314.11	Slamf6	chr1	protein_coding	SLAM family member 6
chr1	171836210;171836485	171836366;171837008	-	171836210	171837008	cassetteExon	0.5	100	100	ENSMUST00000027837.13	ENSMUSG00000026556.16	Vangl2	chr1	protein_coding	VANGL planar cell polarity 2
chr1	171840912;171850153	171850044;171854565	-	171840912	171854565	cassetteExon	0.5	100	100	ENSMUST00000027837.13	ENSMUSG00000026556.16	Vangl2	chr1	protein_coding	VANGL planar cell polarity 2
chr1	171840912	171854158	-	171840912	171854565	A5SS	0.33	50	50	ENSMUST00000027837.13	ENSMUSG00000026556.16	Vangl2	chr1	protein_coding	VANGL planar cell polarity 2
chr1	171836210	171837008	-	171836210	171836366	5pMXE	0.5	50	50	ENSMUST00000148363.2	ENSMUSG00000026556.16	Vangl2	chr1	protein_coding	VANGL planar cell polarity 2
chr1	171840912	171850044	-	171840912	171854158	A5SS	0.33	50	50	ENSMUST00000153662.8	ENSMUSG00000026556.16	Vangl2	chr1	protein_coding	VANGL planar cell polarity 2
chr1	171902603	171908779	-	171902603;171903095	171902972;171908779	ES	0.33	50	50	ENSMUST00000003550.11	ENSMUSG00000003458.13	Ncstn	chr1	protein_coding	nicastrin
chr1	171903095;171903307	171903193;171908779	-	171903095	171908779	cassetteExon	0.5	100	100	ENSMUST00000003550.11	ENSMUSG00000003458.13	Ncstn	chr1	protein_coding	nicastrin
chr1	171902603;171903307	171902972;171908779	-	171902603	171908779	cassetteExon	0.5	100	100	ENSMUST00000146137.8	ENSMUSG00000003458.13	Ncstn	chr1	protein_coding	nicastrin
chr1	171915232	171918506	+	171915232;171916737	171916664;171918506	ES	0.5	50	50	ENSMUST00000135192.8	ENSMUSG00000026553.18	Copa	chr1	protein_coding	coatomer protein complex subunit alpha
chr1	171931826;171932119	171931979;171932753	+	171931826	171932753	cassetteExon	0.5	100	100	ENSMUST00000135192.8	ENSMUSG00000026553.18	Copa	chr1	protein_coding	coatomer protein complex subunit alpha
chr1	171938141	171938217	+	171938141	171938244	A3SS	0.5	50	50	ENSMUST00000135192.8	ENSMUSG00000026553.18	Copa	chr1	protein_coding	coatomer protein complex subunit alpha
chr1	171922928	171925241	+	171919921	171925241	A5SS	0.5	50	50	ENSMUST00000135192.8	ENSMUSG00000026553.18	Copa	chr1	protein_coding	coatomer protein complex subunit alpha
chr1	171956887	171957473	+	171956887	171957469	A3SS	0.5	50	50	ENSMUST00000075895.9	ENSMUSG00000003464.14	Pex19	chr1	protein_coding	peroxisomal biogenesis factor 19
chr1	171961611	171961754	+	171961611	171961774	A3SS	0.5	50	50	ENSMUST00000075895.9	ENSMUSG00000003464.14	Pex19	chr1	protein_coding	peroxisomal biogenesis factor 19
chr1	171954415	171956198	+	171954415	171957469	A3SS	0.5	50	50	ENSMUST00000111252.4	ENSMUSG00000003464.14	Pex19	chr1	protein_coding	peroxisomal biogenesis factor 19
chr1	171956887	171957469	+	171954415	171957469	A5SS	0.5	50	50	ENSMUST00000111252.4	ENSMUSG00000003464.14	Pex19	chr1	protein_coding	peroxisomal biogenesis factor 19
chr1	172016636	172020085	+	172016636;172018646	172018411;172020085	ES	0.5	50	50	ENSMUST00000193638.6	ENSMUSG00000026554.16	Dcaf8	chr1	protein_coding	DDB1 and CUL4 associated factor 8
chr1	172021468	172024450	+	172021468	172022123	3pMXE	0.5	50	50	ENSMUST00000193638.6	ENSMUSG00000026554.16	Dcaf8	chr1	protein_coding	DDB1 and CUL4 associated factor 8
chr1	172013935;172014479	172014422;172014920	+	172013935	172014920	cassetteExon	0.5	100	100	ENSMUST00000193638.6	ENSMUSG00000026554.16	Dcaf8	chr1	protein_coding	DDB1 and CUL4 associated factor 8
chr1	171975905	171976816	+	171975735	171976816	A5SS	0.33	50	50	ENSMUST00000193638.6	ENSMUSG00000026554.16	Dcaf8	chr1	protein_coding	DDB1 and CUL4 associated factor 8
chr1	171976688	171976816	+	171975735	171976816	A5SS	0.33	50	50	ENSMUST00000193638.6	ENSMUSG00000026554.16	Dcaf8	chr1	protein_coding	DDB1 and CUL4 associated factor 8
chr1	171976688	171976816	+	171975905	171976816	A5SS	0.33	50	50	ENSMUST00000192704.6	ENSMUSG00000026554.16	Dcaf8	chr1	protein_coding	DDB1 and CUL4 associated factor 8
chr1	172028148;172032031	172031813;172034164	-	172028148	172034164	cassetteExon	0.5	100	100	ENSMUST00000013842.12	ENSMUSG00000013698.13	Pea15a	chr1	protein_coding	phosphoprotein enriched in astrocytes 15A
chr1	172026833	172028041	-	172026833	172027975	A5SS	0.5	50	50	ENSMUST00000013842.12	ENSMUSG00000013698.13	Pea15a	chr1	protein_coding	phosphoprotein enriched in astrocytes 15A
chr1	172045541	172046979	-	172043587	172046979	A3SS	0.5	50	50	ENSMUST00000170700.2	ENSMUSG00000007122.12	Casq1	chr1	protein_coding	calsequestrin 1
chr1	172043587	172044361	-	172043587	172046979	A5SS	0.5	50	50	ENSMUST00000170700.2	ENSMUSG00000007122.12	Casq1	chr1	protein_coding	calsequestrin 1
chr1	172078570	172081338	-	172078570	172078851	A5SS&ES	0.5	50	50	ENSMUST00000111243.2	ENSMUSG00000007107.7	Atp1a4	chr1	protein_coding	ATPase, Na+/K+ transporting, alpha 4 polypeptide
chr1	172146534	172146899	+	172146534	172146860	A3SS	0.5	50	50	ENSMUST00000139528.8	ENSMUSG00000038034.16	Igsf8	chr1	protein_coding	immunoglobulin superfamily, member 8
chr1	172146990	172147160	+	172146990	172147151	A3SS	0.5	50	50	ENSMUST00000139528.8	ENSMUSG00000038034.16	Igsf8	chr1	protein_coding	immunoglobulin superfamily, member 8
chr1	172140160	172143718	+	172119445	172143718	A5SS	0.5	50	50	ENSMUST00000139528.8	ENSMUSG00000038034.16	Igsf8	chr1	protein_coding	immunoglobulin superfamily, member 8
chr1	172139635	172140058	+	172139365	172140058	A5SS	0.5	50	50	ENSMUST00000085912.10	ENSMUSG00000038034.16	Igsf8	chr1	protein_coding	immunoglobulin superfamily, member 8
chr1	172155695	172156702	-	172155665	172156702	A3SS	0.5	50	50	ENSMUST00000062387.8	ENSMUSG00000038026.13	Kcnj9	chr1	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 9
chr1	172312113	172317080	+	172312113;172312537	172312349;172317080	ES	0.5	50	50	ENSMUST00000127052.8	ENSMUSG00000037995.16	Igsf9	chr1	protein_coding	immunoglobulin superfamily, member 9
chr1	172312537	172317063	+	172312537	172317080	A3SS	0.5	50	50	ENSMUST00000127052.8	ENSMUSG00000037995.16	Igsf9	chr1	protein_coding	immunoglobulin superfamily, member 9
chr1	172309827	172311848	+	172309435	172311848	A5SS	0.33	50	50	ENSMUST00000127052.8	ENSMUSG00000037995.16	Igsf9	chr1	protein_coding	immunoglobulin superfamily, member 9
chr1	172309997	172311848	+	172309435	172311848	A5SS	0.33	50	50	ENSMUST00000127052.8	ENSMUSG00000037995.16	Igsf9	chr1	protein_coding	immunoglobulin superfamily, member 9
chr1	172318010	172318222	+	172318010	172318228	A3SS	0.5	50	50	ENSMUST00000135267.8	ENSMUSG00000037995.16	Igsf9	chr1	protein_coding	immunoglobulin superfamily, member 9
chr1	172309997	172311848	+	172309827	172311848	A5SS	0.33	50	50	ENSMUST00000135267.8	ENSMUSG00000037995.16	Igsf9	chr1	protein_coding	immunoglobulin superfamily, member 9
chr1	172312113	172317080	+	172312113	172312349	A3SS&ES	0.5	50	50	ENSMUST00000140814.8	ENSMUSG00000037995.16	Igsf9	chr1	protein_coding	immunoglobulin superfamily, member 9
chr1	172322123	172322675	+	172322123;172322443	172322320;172322675	ES	0.5	50	50	ENSMUST00000052629.13	ENSMUSG00000037995.16	Igsf9	chr1	protein_coding	immunoglobulin superfamily, member 9
chr1	172321781	172322045	+	172321781	172321973	A3SS	0.5	50	50	ENSMUST00000052629.13	ENSMUSG00000037995.16	Igsf9	chr1	protein_coding	immunoglobulin superfamily, member 9
chr1	172323634	172323747	+	172323634	172323718	A3SS	0.5	50	50	ENSMUST00000052629.13	ENSMUSG00000037995.16	Igsf9	chr1	protein_coding	immunoglobulin superfamily, member 9
chr1	172322123	172322675	+	172322123	172322320	3pMXE	0.5	50	50	ENSMUST00000193620.2	ENSMUSG00000037995.16	Igsf9	chr1	protein_coding	immunoglobulin superfamily, member 9
chr1	172327899	172332706	+	172327899	172332687	A3SS	0.5	50	50	ENSMUST00000138296.8	ENSMUSG00000026547.16	Tagln2	chr1	protein_coding	transgelin 2
chr1	172328881	172332687	+	172327899	172332687	A5SS	0.5	50	50	ENSMUST00000138296.8	ENSMUSG00000026547.16	Tagln2	chr1	protein_coding	transgelin 2
chr1	172348748	172357377	+	172348748;172355482	172355357;172357377	ES	0.5	50	50	ENSMUST00000085894.12	ENSMUSG00000026546.17	Cfap45	chr1	protein_coding	cilia and flagella associated protein 45
chr1	172348899	172355357	+	172348748	172355357	A5SS	0.25	50	50	ENSMUST00000085894.12	ENSMUSG00000026546.17	Cfap45	chr1	protein_coding	cilia and flagella associated protein 45
chr1	172353745	172355357	+	172348748	172355357	A5SS	0.25	50	50	ENSMUST00000085894.12	ENSMUSG00000026546.17	Cfap45	chr1	protein_coding	cilia and flagella associated protein 45
chr1	172354221	172355357	+	172348748	172355357	A5SS	0.25	50	50	ENSMUST00000085894.12	ENSMUSG00000026546.17	Cfap45	chr1	protein_coding	cilia and flagella associated protein 45
chr1	172365299	172366046	+	172362907	172366046	A5SS	0.5	50	50	ENSMUST00000085894.12	ENSMUSG00000026546.17	Cfap45	chr1	protein_coding	cilia and flagella associated protein 45
chr1	172353745	172355357	+	172348899	172355357	A5SS	0.25	50	50	ENSMUST00000162988.8	ENSMUSG00000026546.17	Cfap45	chr1	protein_coding	cilia and flagella associated protein 45
chr1	172354221	172355357	+	172348899	172355357	A5SS	0.25	50	50	ENSMUST00000162988.8	ENSMUSG00000026546.17	Cfap45	chr1	protein_coding	cilia and flagella associated protein 45
chr1	172354221	172355357	+	172353745	172355357	A5SS	0.25	50	50	ENSMUST00000159792.8	ENSMUSG00000026546.17	Cfap45	chr1	protein_coding	cilia and flagella associated protein 45
chr1	172369740	172370474	-	172366048	172370474	A3SS	0.5	50	50	ENSMUST00000132370.9	ENSMUSG00000085184.10	4933439K11Rik	chr1	lncRNA	RIKEN cDNA 4933439K11 gene
chr1	172387550	172387801	+	172387350	172387801	A5SS	0.5	50	50	ENSMUST00000061835.10	ENSMUSG00000049598.10	Vsig8	chr1	protein_coding	V-set and immunoglobulin domain containing 8
chr1	172525767	172658850	+	172525767	172525981	3pMXE	0.5	50	50	ENSMUST00000038495.5	ENSMUSG00000037942.6	Crp	chr1	protein_coding	C-reactive protein, pentraxin-related
chr1	173016549	173017941	-	173016549;173017547	173017348;173017941	ES	0.5	50	50	ENSMUST00000215878.2	ENSMUSG00000058981.5	Olfr1406	chr1	protein_coding	olfactory receptor 1406
chr1	173025801	173030900	+	173025801	173030708	A3SS	0.5	50	50	ENSMUST00000216603.2	ENSMUSG00000046643.3	Olfr218	chr1	protein_coding	olfactory receptor 218
chr1	173053081	173054294	-	173053124	173054294	A3SS	0.5	50	50	ENSMUST00000049706.11	ENSMUSG00000005339.11	Fcer1a	chr1	protein_coding	Fc receptor, IgE, high affinity I, alpha polypeptide
chr1	173174129;173176690	173176589;173194979	-	173174129	173194979	cassetteExon	0.5	100	100	ENSMUST00000111220.8	ENSMUSG00000005338.15	Cadm3	chr1	protein_coding	cell adhesion molecule 3
chr1	173247121	173255325	+	173247121;173248252	173248137;173255325	ES	0.5	50	50	ENSMUST00000147604.8	ENSMUSG00000037860.16	Aim2	chr1	protein_coding	absent in melanoma 2
chr1	173283181	173289473	+	173283181;173287415	173287264;173289473	ES	0.5	50	50	ENSMUST00000147604.8	ENSMUSG00000037860.16	Aim2	chr1	protein_coding	absent in melanoma 2
chr1	173282600	173282900	+	173281879	173282900	A5SS	0.5	50	50	ENSMUST00000147604.8	ENSMUSG00000037860.16	Aim2	chr1	protein_coding	absent in melanoma 2
chr1	173247121	173255325	+	173248252	173255325	5pMXE	0.5	50	50	ENSMUST00000173023.2	ENSMUSG00000037860.16	Aim2	chr1	protein_coding	absent in melanoma 2
chr1	173283181	173289473	+	173283181	173287264	3pMXE	0.5	50	50	ENSMUST00000173023.2	ENSMUSG00000037860.16	Aim2	chr1	protein_coding	absent in melanoma 2
chr1	173352788	173354030	-	173349225	173354030	A3SS	0.33	50	50	ENSMUST00000139092.8	ENSMUSG00000070501.15	Ifi214	chr1	protein_coding	interferon activated gene 214
chr1	173353938	173354030	-	173349225	173354030	A3SS	0.33	50	50	ENSMUST00000139092.8	ENSMUSG00000070501.15	Ifi214	chr1	protein_coding	interferon activated gene 214
chr1	173349225	173350399	-	173349225	173354030	A5SS	0.5	50	50	ENSMUST00000139092.8	ENSMUSG00000070501.15	Ifi214	chr1	protein_coding	interferon activated gene 214
chr1	173352788;173353938	173353831;173354030	-	173352788	173354030	cassetteExon	0.5	100	100	ENSMUST00000090406.6	ENSMUSG00000070501.15	Ifi214	chr1	protein_coding	interferon activated gene 214
chr1	173394835;173395828	173395733;173396375	-	173394835	173396375	cassetteExon	0.5	100	100	ENSMUST00000150649.9	ENSMUSG00000073491.12	Ifi213	chr1	protein_coding	interferon activated gene 213
chr1	173422871;173424573	173424522;173426586	-	173422871	173426586	cassetteExon	0.5	100	100	ENSMUST00000150649.9	ENSMUSG00000073491.12	Ifi213	chr1	protein_coding	interferon activated gene 213
chr1	173396666	173402360	-	173396666	173409697	A5SS	0.5	50	50	ENSMUST00000150649.9	ENSMUSG00000073491.12	Ifi213	chr1	protein_coding	interferon activated gene 213
chr1	173468810;173469010	173468903;173470053	+	173468810	173470053	cassetteExon	0.5	100	100	ENSMUST00000056071.13	ENSMUSG00000043263.14	Ifi209	chr1	protein_coding	interferon activated gene 209
chr1	173560008	173562683	-	173560008	173562662	A5SS	0.5	50	50	ENSMUST00000042610.15	ENSMUSG00000073490.12	Ifi207	chr1	protein_coding	interferon activated gene 207
chr1	173676832	173677779	-	173676832	173678429	A5SS	0.5	50	50	ENSMUST00000220623.2	ENSMUSG00000090272.10	Mndal	chr1	protein_coding	myeloid nuclear differentiation antigen like
chr1	173699111	173701917	-	173699111;173700585	173700418;173701917	ES	0.5	50	50	ENSMUST00000186442.7	ENSMUSG00000090272.10	Mndal	chr1	protein_coding	myeloid nuclear differentiation antigen like
chr1	173702038	173707491	-	173702038	173703142	5pMXE	0.5	50	50	ENSMUST00000186442.7	ENSMUSG00000090272.10	Mndal	chr1	protein_coding	myeloid nuclear differentiation antigen like
chr1	173690449;173693123	173692965;173698944	-	173690449	173698944	cassetteExon	0.5	100	100	ENSMUST00000186442.7	ENSMUSG00000090272.10	Mndal	chr1	protein_coding	myeloid nuclear differentiation antigen like
chr1	173695885	173698944	-	173690449	173698944	A3SS	0.33	50	50	ENSMUST00000186442.7	ENSMUSG00000090272.10	Mndal	chr1	protein_coding	myeloid nuclear differentiation antigen like
chr1	173702038	173707491	-	173702038;173703426	173703142;173707491	ES	0.5	50	50	ENSMUST00000188804.7	ENSMUSG00000090272.10	Mndal	chr1	protein_coding	myeloid nuclear differentiation antigen like
chr1	173707556	173708008	-	173707556	173707717	5pMXE	0.5	50	50	ENSMUST00000188804.7	ENSMUSG00000090272.10	Mndal	chr1	protein_coding	myeloid nuclear differentiation antigen like
chr1	173693123;173695885	173695766;173698944	-	173693123	173698944	cassetteExon	0.5	100	100	ENSMUST00000188804.7	ENSMUSG00000090272.10	Mndal	chr1	protein_coding	myeloid nuclear differentiation antigen like
chr1	173693123	173698944	-	173693123	173695766	5pMXE	0.5	50	50	ENSMUST00000189474.7	ENSMUSG00000090272.10	Mndal	chr1	protein_coding	myeloid nuclear differentiation antigen like
chr1	173699111	173701917	-	173699111	173700418	5pMXE	0.5	50	50	ENSMUST00000190071.2	ENSMUSG00000090272.10	Mndal	chr1	protein_coding	myeloid nuclear differentiation antigen like
chr1	173699111	173701917	-	173700585	173701917	3pMXE	0.5	50	50	ENSMUST00000191500.7	ENSMUSG00000090272.10	Mndal	chr1	protein_coding	myeloid nuclear differentiation antigen like
chr1	173702038	173707491	-	173703426	173707491	3pMXE	0.5	50	50	ENSMUST00000187636.2	ENSMUSG00000090272.10	Mndal	chr1	protein_coding	myeloid nuclear differentiation antigen like
chr1	173754788	173762576	-	173754788;173761492	173761349;173762576	ES	0.5	50	50	ENSMUST00000042228.15	ENSMUSG00000039997.17	Ifi203	chr1	protein_coding	interferon activated gene 203
chr1	173764205	173769796	-	173764205;173765592	173765308;173769796	ES	0.5	50	50	ENSMUST00000042228.15	ENSMUSG00000039997.17	Ifi203	chr1	protein_coding	interferon activated gene 203
chr1	173757082	173761349	-	173754788	173761349	A3SS	0.5	50	50	ENSMUST00000042228.15	ENSMUSG00000039997.17	Ifi203	chr1	protein_coding	interferon activated gene 203
chr1	173754788	173755841	-	173754788	173761349	A5SS	0.33	50	50	ENSMUST00000042228.15	ENSMUSG00000039997.17	Ifi203	chr1	protein_coding	interferon activated gene 203
chr1	173754788	173755841	-	173754788	173762576	A5SS	0.33	50	50	ENSMUST00000081216.12	ENSMUSG00000039997.17	Ifi203	chr1	protein_coding	interferon activated gene 203
chr1	173769860	173770222	-	173769860	173770021	5pMXE	0.33	50	50	ENSMUST00000123708.8	ENSMUSG00000039997.17	Ifi203	chr1	protein_coding	interferon activated gene 203
chr1	173769860	173769949	-	173769860	173770021	A5SS	0.33	50	50	ENSMUST00000123708.8	ENSMUSG00000039997.17	Ifi203	chr1	protein_coding	interferon activated gene 203
chr1	173769860	173769949	-	173769860	173770222	A5SS	0.33	50	50	ENSMUST00000156895.8	ENSMUSG00000039997.17	Ifi203	chr1	protein_coding	interferon activated gene 203
chr1	173754788	173761349	-	173754788;173757082	173755841;173761349	ES	0.5	50	50	ENSMUST00000129829.8	ENSMUSG00000039997.17	Ifi203	chr1	protein_coding	interferon activated gene 203
chr1	173876822	173877936	+	173876822;173877136	173877039;173877936	ES	0.5	50	50	ENSMUST00000213381.2	ENSMUSG00000047048.5	Olfr432	chr1	protein_coding	olfactory receptor 432
chr1	173894459	173895989	+	173894192	173895989	A5SS	0.5	50	50	ENSMUST00000213425.2	ENSMUSG00000050134.8	Olfr430	chr1	protein_coding	olfactory receptor 430
chr1	174193199	174196471	+	174192781	174196471	A5SS	0.5	50	50	ENSMUST00000217962.2	ENSMUSG00000066672.3	Olfr417	chr1	protein_coding	olfactory receptor 417
chr1	174409629	174409710	+	174409629	174420627	A3SS	0.5	50	50	ENSMUST00000030039.13	ENSMUSG00000028354.14	Fmn2	chr1	protein_coding	formin 2
chr1	174440217	174443006	+	174440217	174474672	A3SS	0.33	50	50	ENSMUST00000030039.13	ENSMUSG00000028354.14	Fmn2	chr1	protein_coding	formin 2
chr1	174542061	174547411	+	174527242	174547411	A5SS	0.5	50	50	ENSMUST00000030039.13	ENSMUSG00000028354.14	Fmn2	chr1	protein_coding	formin 2
chr1	174440217	174521753	+	174440217	174443006	3pMXE	0.33	50	50	ENSMUST00000195300.2	ENSMUSG00000028354.14	Fmn2	chr1	protein_coding	formin 2
chr1	174440217	174474672	+	174440217	174521753	A3SS	0.33	50	50	ENSMUST00000195621.2	ENSMUSG00000028354.14	Fmn2	chr1	protein_coding	formin 2
chr1	174494270	174521753	+	174440217	174521753	A5SS	0.5	50	50	ENSMUST00000195621.2	ENSMUSG00000028354.14	Fmn2	chr1	protein_coding	formin 2
chr1	174887360	174905755	-	174887360;174894260	174894183;174905755	ES	0.25	50	50	ENSMUST00000194555.6	ENSMUSG00000026527.14	Rgs7	chr1	protein_coding	regulator of G protein signaling 7
chr1	174887360;174903663	174903583;174905755	-	174887360;174894260	174894183;174905755	MXE	0.5	100	100	ENSMUST00000194555.6	ENSMUSG00000026527.14	Rgs7	chr1	protein_coding	regulator of G protein signaling 7
chr1	174887360;174904443	174904390;174905755	-	174887360;174894260	174894183;174905755	MXE	0.5	100	100	ENSMUST00000194555.6	ENSMUSG00000026527.14	Rgs7	chr1	protein_coding	regulator of G protein signaling 7
chr1	174894260;174904443	174904390;174905755	-	174894260	174905755	cassetteExon	0.5	100	100	ENSMUST00000194555.6	ENSMUSG00000026527.14	Rgs7	chr1	protein_coding	regulator of G protein signaling 7
chr1	174887360	174905755	-	174887360;174903663	174903583;174905755	ES	0.25	50	50	ENSMUST00000195324.6	ENSMUSG00000026527.14	Rgs7	chr1	protein_coding	regulator of G protein signaling 7
chr1	174887360;174904443	174904390;174905755	-	174887360;174903663	174903583;174905755	MXE	0.5	100	100	ENSMUST00000195324.6	ENSMUSG00000026527.14	Rgs7	chr1	protein_coding	regulator of G protein signaling 7
chr1	174903663;174904443	174904390;174905755	-	174903663	174905755	cassetteExon	0.5	100	100	ENSMUST00000195324.6	ENSMUSG00000026527.14	Rgs7	chr1	protein_coding	regulator of G protein signaling 7
chr1	174887360;174904443	174904390;174905755	-	174887360	174905755	cassetteExon	0.5	100	100	ENSMUST00000192227.6	ENSMUSG00000026527.14	Rgs7	chr1	protein_coding	regulator of G protein signaling 7
chr1	174887360	174904390	-	174887360;174903663	174903583;174904390	ES	0.33	50	50	ENSMUST00000194288.6	ENSMUSG00000026527.14	Rgs7	chr1	protein_coding	regulator of G protein signaling 7
chr1	174887360;174894260	174894183;174904390	-	174887360;174903663	174903583;174904390	MXE	0.5	100	100	ENSMUST00000194288.6	ENSMUSG00000026527.14	Rgs7	chr1	protein_coding	regulator of G protein signaling 7
chr1	174887360;174894260	174894183;174905755	-	174887360;174904443	174903583;174905755	MXE	0.5	100	100	ENSMUST00000194288.6	ENSMUSG00000026527.14	Rgs7	chr1	protein_coding	regulator of G protein signaling 7
chr1	174887360	174904390	-	174887360;174894260	174894183;174904390	ES	0.33	50	50	ENSMUST00000195477.6	ENSMUSG00000026527.14	Rgs7	chr1	protein_coding	regulator of G protein signaling 7
chr1	174887360;174903663	174903583;174905755	-	174887360;174904443	174894183;174905755	MXE	0.5	100	100	ENSMUST00000195477.6	ENSMUSG00000026527.14	Rgs7	chr1	protein_coding	regulator of G protein signaling 7
chr1	175433748	175437203	-	175433748;175435586	175435383;175437203	ES	0.5	50	50	ENSMUST00000027810.14	ENSMUSG00000026526.15	Fh1	chr1	protein_coding	fumarate hydratase 1
chr1	175450242	175453017	-	175446751	175453017	A3SS	0.5	50	50	ENSMUST00000027810.14	ENSMUSG00000026526.15	Fh1	chr1	protein_coding	fumarate hydratase 1
chr1	175484369	175486079	+	175484369;175485988	175485887;175486079	ES	0.5	50	50	ENSMUST00000140474.8	ENSMUSG00000039783.16	Kmo	chr1	protein_coding	kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
chr1	175479274;175481240	175481093;175482635	+	175479274	175482635	cassetteExon	0.5	100	100	ENSMUST00000140474.8	ENSMUSG00000039783.16	Kmo	chr1	protein_coding	kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
chr1	175476883	175478131	+	175476883	175478169	A3SS	0.5	50	50	ENSMUST00000140474.8	ENSMUSG00000039783.16	Kmo	chr1	protein_coding	kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
chr1	175459839	175465075	+	175448134	175465075	A5SS	0.33	50	50	ENSMUST00000140474.8	ENSMUSG00000039783.16	Kmo	chr1	protein_coding	kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
chr1	175461185	175465075	+	175448134	175465075	A5SS	0.33	50	50	ENSMUST00000140474.8	ENSMUSG00000039783.16	Kmo	chr1	protein_coding	kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
chr1	175459839;175461185	175461032;175465075	+	175459839	175465075	cassetteExon	0.5	100	100	ENSMUST00000040250.15	ENSMUSG00000039783.16	Kmo	chr1	protein_coding	kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
chr1	175479274	175482635	+	175479274	175481093	3pMXE	0.5	50	50	ENSMUST00000142223.8	ENSMUSG00000039783.16	Kmo	chr1	protein_coding	kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
chr1	175515006	175519736	-	175493195	175519736	A3SS	0.33	50	50	ENSMUST00000027809.8	ENSMUSG00000026525.10	Opn3	chr1	protein_coding	opsin 3
chr1	175516246	175519736	-	175493195	175519736	A3SS	0.33	50	50	ENSMUST00000027809.8	ENSMUSG00000026525.10	Opn3	chr1	protein_coding	opsin 3
chr1	175515006	175519736	-	175516246	175519736	A3SS	0.33	50	50	ENSMUST00000104984.4	ENSMUSG00000078185.4	Chml	chr1	protein_coding	choroideremia-like
chr1	175547947	175553955	+	175547947;175552262	175552233;175553955	ES	0.5	50	50	ENSMUST00000195794.2	ENSMUSG00000026523.15	Wdr64	chr1	protein_coding	WD repeat domain 64
chr1	175571191	175583090	+	175571191	175571309	3pMXE	0.5	50	50	ENSMUST00000195794.2	ENSMUSG00000026523.15	Wdr64	chr1	protein_coding	WD repeat domain 64
chr1	175633608	175638094	+	175633608;175636347	175636242;175638094	ES	0.5	50	50	ENSMUST00000094288.10	ENSMUSG00000026523.15	Wdr64	chr1	protein_coding	WD repeat domain 64
chr1	175642020	175642852	+	175639676	175642852	A5SS	0.5	50	50	ENSMUST00000094288.10	ENSMUSG00000026523.15	Wdr64	chr1	protein_coding	WD repeat domain 64
chr1	175710634	175715144	+	175710634;175714375	175714256;175715144	ES	0.5	50	50	ENSMUST00000039725.12	ENSMUSG00000039748.12	Exo1	chr1	protein_coding	exonuclease 1
chr1	175733555;175734226	175734172;175735996	+	175733555	175735996	cassetteExon	0.5	100	100	ENSMUST00000039725.12	ENSMUSG00000039748.12	Exo1	chr1	protein_coding	exonuclease 1
chr1	175708793	175710461	+	175708766	175710461	A5SS	0.33	50	50	ENSMUST00000039725.12	ENSMUSG00000039748.12	Exo1	chr1	protein_coding	exonuclease 1
chr1	175708920	175710461	+	175708766	175710461	A5SS	0.33	50	50	ENSMUST00000039725.12	ENSMUSG00000039748.12	Exo1	chr1	protein_coding	exonuclease 1
chr1	175721355	175723694	+	175721400	175723694	A5SS	0.5	50	50	ENSMUST00000039725.12	ENSMUSG00000039748.12	Exo1	chr1	protein_coding	exonuclease 1
chr1	175735243	175735996	+	175733555	175735996	A5SS	0.33	50	50	ENSMUST00000039725.12	ENSMUSG00000039748.12	Exo1	chr1	protein_coding	exonuclease 1
chr1	175708920	175710461	+	175708793	175710461	A5SS	0.33	50	50	ENSMUST00000195196.6	ENSMUSG00000039748.12	Exo1	chr1	protein_coding	exonuclease 1
chr1	175735243	175735996	+	175734226	175735996	A5SS	0.33	50	50	ENSMUST00000194636.2	ENSMUSG00000039748.12	Exo1	chr1	protein_coding	exonuclease 1
chr1	176089086	176102252	-	175967664	176102252	A3SS	0.5	50	50	ENSMUST00000065967.14	ENSMUSG00000055214.16	Pld5	chr1	protein_coding	phospholipase D family, member 5
chr1	175872528	175902005	-	175872528	175901980	A5SS	0.5	50	50	ENSMUST00000065967.14	ENSMUSG00000055214.16	Pld5	chr1	protein_coding	phospholipase D family, member 5
chr1	175902091	175967521	-	175902091	175917437	A5SS&ES	0.5	50	50	ENSMUST00000065967.14	ENSMUSG00000055214.16	Pld5	chr1	protein_coding	phospholipase D family, member 5
chr1	175967664	176041186	-	175967664	176102252	A5SS	0.5	50	50	ENSMUST00000065967.14	ENSMUSG00000055214.16	Pld5	chr1	protein_coding	phospholipase D family, member 5
chr1	176602476	176609817	-	176602476;176607961	176607827;176609817	ES	0.5	50	50	ENSMUST00000057037.13	ENSMUSG00000057335.12	Cep170	chr1	protein_coding	centrosomal protein 170
chr1	176621215	176641462	-	176621215	176634565	5pMXE	0.5	50	50	ENSMUST00000057037.13	ENSMUSG00000057335.12	Cep170	chr1	protein_coding	centrosomal protein 170
chr1	176577618	176582732	-	176577726	176582732	A3SS	0.5	50	50	ENSMUST00000057037.13	ENSMUSG00000057335.12	Cep170	chr1	protein_coding	centrosomal protein 170
chr1	176610117	176616033	-	176610121	176616033	A3SS	0.5	50	50	ENSMUST00000057037.13	ENSMUSG00000057335.12	Cep170	chr1	protein_coding	centrosomal protein 170
chr1	176567655	176570037	-	176567655	176570067	A5SS	0.33	50	50	ENSMUST00000057037.13	ENSMUSG00000057335.12	Cep170	chr1	protein_coding	centrosomal protein 170
chr1	176567655	176570118	-	176567655	176570067	A5SS	0.33	50	50	ENSMUST00000057037.13	ENSMUSG00000057335.12	Cep170	chr1	protein_coding	centrosomal protein 170
chr1	176577726	176581894	-	176577726	176582732	A5SS	0.5	50	50	ENSMUST00000057037.13	ENSMUSG00000057335.12	Cep170	chr1	protein_coding	centrosomal protein 170
chr1	176567655	176570118	-	176567655	176570037	A5SS	0.33	50	50	ENSMUST00000194727.6	ENSMUSG00000057335.12	Cep170	chr1	protein_coding	centrosomal protein 170
chr1	176602476	176609817	-	176607961	176609817	3pMXE	0.5	50	50	ENSMUST00000192961.6	ENSMUSG00000057335.12	Cep170	chr1	protein_coding	centrosomal protein 170
chr1	176653850	176658623	+	176653850;176656549	176656436;176658623	ES	0.5	50	50	ENSMUST00000150429.8	ENSMUSG00000026504.18	Sdccag8	chr1	protein_coding	serologically defined colon cancer antigen 8
chr1	176681468	176691182	+	176681468	176689438	3pMXE	0.33	50	50	ENSMUST00000056773.15	ENSMUSG00000026504.18	Sdccag8	chr1	protein_coding	serologically defined colon cancer antigen 8
chr1	176681468	176695778	+	176681468	176689438	3pMXE	0.33	50	50	ENSMUST00000056773.15	ENSMUSG00000026504.18	Sdccag8	chr1	protein_coding	serologically defined colon cancer antigen 8
chr1	176695930	176702130	+	176695930;176699826	176699619;176702130	ES	0.5	50	50	ENSMUST00000133305.8	ENSMUSG00000026504.18	Sdccag8	chr1	protein_coding	serologically defined colon cancer antigen 8
chr1	176681468;176691296	176691182;176695778	+	176681468	176695778	cassetteExon	0.5	100	100	ENSMUST00000133305.8	ENSMUSG00000026504.18	Sdccag8	chr1	protein_coding	serologically defined colon cancer antigen 8
chr1	176825783	176839455	+	176783489	176839455	A5SS	0.5	50	50	ENSMUST00000027785.15	ENSMUSG00000026504.18	Sdccag8	chr1	protein_coding	serologically defined colon cancer antigen 8
chr1	176853015	176859216	-	176847711	176859216	A3SS	0.5	50	50	ENSMUST00000019843.15	ENSMUSG00000019699.17	Akt3	chr1	protein_coding	thymoma viral proto-oncogene 3
chr1	177076447	177085015	-	177076447	177085712	A5SS	0.5	50	50	ENSMUST00000111159.2	ENSMUSG00000019699.17	Akt3	chr1	protein_coding	thymoma viral proto-oncogene 3
chr1	177270161;177270907	177270790;177274655	+	177270161	177274655	cassetteExon	0.5	100	100	ENSMUST00000195002.2	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177271658	177274655	+	177270161	177274655	A5SS	0.12	50	50	ENSMUST00000195002.2	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177272253	177274655	+	177270161	177274655	A5SS	0.12	50	50	ENSMUST00000195002.2	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177272371	177274655	+	177270161	177274655	A5SS	0.12	50	50	ENSMUST00000195002.2	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177272388	177274655	+	177270161	177274655	A5SS	0.12	50	50	ENSMUST00000195002.2	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177272621	177274655	+	177270161	177274655	A5SS	0.12	50	50	ENSMUST00000195002.2	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177274138	177274655	+	177270161	177274655	A5SS	0.12	50	50	ENSMUST00000195002.2	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177270907;177271658	177271551;177274655	+	177270907	177274655	cassetteExon	0.5	100	100	ENSMUST00000195549.6	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177270907;177272371	177272305;177274655	+	177270907	177274655	cassetteExon	0.5	100	100	ENSMUST00000195549.6	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177270907;177272388	177272305;177274655	+	177270907	177274655	cassetteExon	0.5	100	100	ENSMUST00000195549.6	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177270907;177272621	177272305;177274655	+	177270907	177274655	cassetteExon	0.5	100	100	ENSMUST00000195549.6	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177272253	177274655	+	177270907	177274655	A5SS	0.12	50	50	ENSMUST00000195549.6	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177274138	177274655	+	177270907	177274655	A5SS	0.12	50	50	ENSMUST00000195549.6	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177270907;177272371	177272305;177274655	+	177270907;177271658	177271551;177274655	MXE	0.5	100	100	ENSMUST00000194319.2	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177270907;177272388	177272305;177274655	+	177270907;177271658	177271551;177274655	MXE	0.5	100	100	ENSMUST00000194319.2	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177270907;177272621	177272305;177274655	+	177270907;177271658	177271551;177274655	MXE	0.5	100	100	ENSMUST00000194319.2	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177272253	177274655	+	177271658	177274655	A5SS	0.12	50	50	ENSMUST00000194319.2	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177274138	177274655	+	177271658	177274655	A5SS	0.12	50	50	ENSMUST00000194319.2	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177272388;177274138	177274106;177274655	+	177272388	177274655	cassetteExon	0.5	100	100	ENSMUST00000192699.2	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177272253	177274655	+	177272388	177274655	A5SS&ES	0.14	50	50	ENSMUST00000192699.2	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177272371	177274655	+	177272388	177274655	A5SS	0.14	50	50	ENSMUST00000192699.2	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177272621	177274655	+	177272388	177274655	A5SS	0.14	50	50	ENSMUST00000192699.2	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177270907	177274655	+	177272388	177274655	5pMXE	0.12	50	50	ENSMUST00000094276.5	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177271658	177274655	+	177272388	177274655	5pMXE	0.12	50	50	ENSMUST00000094276.5	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177270907	177274655	+	177272371	177274655	5pMXE	0.12	50	50	ENSMUST00000192851.2	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177271658	177274655	+	177272371	177274655	5pMXE	0.12	50	50	ENSMUST00000192851.2	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177272253	177274655	+	177272371	177274655	A5SS	0.12	50	50	ENSMUST00000192851.2	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177272621	177274655	+	177272371	177274655	A5SS	0.12	50	50	ENSMUST00000192851.2	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177274138	177274655	+	177272371	177274655	A5SS	0.12	50	50	ENSMUST00000192851.2	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177272621	177274655	+	177272253	177274655	A5SS	0.12	50	50	ENSMUST00000195388.2	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177274138	177274655	+	177272253	177274655	A5SS	0.12	50	50	ENSMUST00000195388.2	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177272621	177274655	+	177274138	177274655	A5SS&ES	0.25	50	50	ENSMUST00000193440.2	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177270907	177274655	+	177272621	177274655	5pMXE	0.12	50	50	ENSMUST00000195612.2	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177271658	177274655	+	177272621	177274655	5pMXE	0.12	50	50	ENSMUST00000195612.2	ENSMUSG00000063659.12	Zbtb18	chr1	protein_coding	zinc finger and BTB domain containing 18
chr1	177287814	177288383	+	177287814	177287973	A3SS	0.5	50	50	ENSMUST00000191905.2	ENSMUSG00000102432.2	Gm29856	chr1	lncRNA	predicted gene, 29856
chr1	177874563	177905021	+	177874563;177898119	177898095;177905021	ES	0.5	50	50	ENSMUST00000191719.6	ENSMUSG00000091476.9	Catspere2	chr1	protein_coding	cation channel sperm associated auxiliary subunit epsilon 2
chr1	177976548	177982028	+	177976548	177977224	3pMXE	0.5	50	50	ENSMUST00000191719.6	ENSMUSG00000091476.9	Catspere2	chr1	protein_coding	cation channel sperm associated auxiliary subunit epsilon 2
chr1	177874563	177874706	+	177874563	177898095	A3SS	0.33	50	50	ENSMUST00000191719.6	ENSMUSG00000091476.9	Catspere2	chr1	protein_coding	cation channel sperm associated auxiliary subunit epsilon 2
chr1	177819150	177830561	+	177811270	177830561	A5SS	0.5	50	50	ENSMUST00000191719.6	ENSMUSG00000091476.9	Catspere2	chr1	protein_coding	cation channel sperm associated auxiliary subunit epsilon 2
chr1	177969156	177976449	+	177969084	177976449	A5SS	0.5	50	50	ENSMUST00000191719.6	ENSMUSG00000091476.9	Catspere2	chr1	protein_coding	cation channel sperm associated auxiliary subunit epsilon 2
chr1	177874563	177905021	+	177874563	177874706	3pMXE	0.33	50	50	ENSMUST00000094273.10	ENSMUSG00000091476.9	Catspere2	chr1	protein_coding	cation channel sperm associated auxiliary subunit epsilon 2
chr1	178015523	178065478	+	178015523;178025856	178025784;178065478	ES	0.33	50	50	ENSMUST00000161075.8	ENSMUSG00000026502.14	Desi2	chr1	protein_coding	desumoylating isopeptidase 2
chr1	178015523	178042495	+	178015523	178025784	A3SS&ES	0.33	50	50	ENSMUST00000161075.8	ENSMUSG00000026502.14	Desi2	chr1	protein_coding	desumoylating isopeptidase 2
chr1	178046109	178065478	+	178025856	178065478	A5SS	0.33	50	50	ENSMUST00000161075.8	ENSMUSG00000026502.14	Desi2	chr1	protein_coding	desumoylating isopeptidase 2
chr1	178015523	178042495	+	178015523	178065478	A3SS	0.33	50	50	ENSMUST00000027783.14	ENSMUSG00000026502.14	Desi2	chr1	protein_coding	desumoylating isopeptidase 2
chr1	178046109	178065478	+	178015523	178065478	A5SS	0.33	50	50	ENSMUST00000027783.14	ENSMUSG00000026502.14	Desi2	chr1	protein_coding	desumoylating isopeptidase 2
chr1	178015523;178025856	178025784;178065478	+	178015523;178046109	178042495;178065478	MXE	0.5	100	100	ENSMUST00000159284.2	ENSMUSG00000026502.14	Desi2	chr1	protein_coding	desumoylating isopeptidase 2
chr1	178150760	178151183	-	178150760	178151185	A5SS	0.5	50	50	ENSMUST00000159117.2	ENSMUSG00000039630.11	Hnrnpu	chr1	protein_coding	heterogeneous nuclear ribonucleoprotein U
chr1	178151278	178152808	-	178151278;178151581	178151531;178152808	ES	0.5	50	50	ENSMUST00000161769.8	ENSMUSG00000039630.11	Hnrnpu	chr1	protein_coding	heterogeneous nuclear ribonucleoprotein U
chr1	178152878;178156972	178156787;178157433	-	178152878	178157433	cassetteExon	0.5	100	100	ENSMUST00000161769.8	ENSMUSG00000039630.11	Hnrnpu	chr1	protein_coding	heterogeneous nuclear ribonucleoprotein U
chr1	178161591	178161850	-	178161591	178163447	A5SS	0.5	50	50	ENSMUST00000161769.8	ENSMUSG00000039630.11	Hnrnpu	chr1	protein_coding	heterogeneous nuclear ribonucleoprotein U
chr1	178152878	178157433	-	178152878	178156787	5pMXE	0.5	50	50	ENSMUST00000189450.2	ENSMUSG00000039630.11	Hnrnpu	chr1	protein_coding	heterogeneous nuclear ribonucleoprotein U
chr1	178152878	178157433	-	178156972	178157433	A3SS	0.5	50	50	ENSMUST00000037748.9	ENSMUSG00000039630.11	Hnrnpu	chr1	protein_coding	heterogeneous nuclear ribonucleoprotein U
chr1	178233698	178264967	+	178233698;178261881	178261574;178264967	ES	0.5	50	50	ENSMUST00000194861.2	ENSMUSG00000026495.9	Efcab2	chr1	protein_coding	EF-hand calcium binding domain 2
chr1	178276593	178283381	+	178265051	178283381	A5SS	0.5	50	50	ENSMUST00000027775.9	ENSMUSG00000026495.9	Efcab2	chr1	protein_coding	EF-hand calcium binding domain 2
chr1	178626418	178649048	+	178543534	178649048	A5SS	0.5	50	50	ENSMUST00000161017.8	ENSMUSG00000026494.13	Kif26b	chr1	protein_coding	kinesin family member 26B
chr1	179205364	179232848	-	178921967	179232848	A3SS	0.33	50	50	ENSMUST00000128302.8	ENSMUSG00000055067.16	Smyd3	chr1	protein_coding	SET and MYND domain containing 3
chr1	179223396	179232848	-	178921967	179232848	A3SS	0.33	50	50	ENSMUST00000128302.8	ENSMUSG00000055067.16	Smyd3	chr1	protein_coding	SET and MYND domain containing 3
chr1	179336700	179345353	-	179250983	179345353	A3SS	0.5	50	50	ENSMUST00000128302.8	ENSMUSG00000055067.16	Smyd3	chr1	protein_coding	SET and MYND domain containing 3
chr1	178799861	178816640	-	178799861	178871302	A5SS	0.5	50	50	ENSMUST00000128302.8	ENSMUSG00000055067.16	Smyd3	chr1	protein_coding	SET and MYND domain containing 3
chr1	178921967	179039887	-	178921967	179232848	A5SS	0.33	50	50	ENSMUST00000128302.8	ENSMUSG00000055067.16	Smyd3	chr1	protein_coding	SET and MYND domain containing 3
chr1	178921967	179201525	-	178921967	179232848	A5SS	0.33	50	50	ENSMUST00000128302.8	ENSMUSG00000055067.16	Smyd3	chr1	protein_coding	SET and MYND domain containing 3
chr1	178921967	179039887	-	178921967	179201525	A5SS	0.33	50	50	ENSMUST00000131684.8	ENSMUSG00000055067.16	Smyd3	chr1	protein_coding	SET and MYND domain containing 3
chr1	179223396	179232848	-	179205364	179232848	A3SS	0.33	50	50	ENSMUST00000125756.2	ENSMUSG00000055067.16	Smyd3	chr1	protein_coding	SET and MYND domain containing 3
chr1	179370022	179373387	-	179370022;179372551	179372463;179373387	ES	0.33	50	50	ENSMUST00000027769.6	ENSMUSG00000026492.12	Tfb2m	chr1	protein_coding	transcription factor B2, mitochondrial
chr1	179359692;179360289	179360235;179361198	-	179359692	179361198	cassetteExon	0.5	100	100	ENSMUST00000027769.6	ENSMUSG00000026492.12	Tfb2m	chr1	protein_coding	transcription factor B2, mitochondrial
chr1	179370022;179370697	179370490;179372463	-	179370022	179372463	cassetteExon	0.5	100	100	ENSMUST00000027769.6	ENSMUSG00000026492.12	Tfb2m	chr1	protein_coding	transcription factor B2, mitochondrial
chr1	179372551;179373023	179372932;179373387	-	179372551	179373387	cassetteExon	0.5	100	100	ENSMUST00000027769.6	ENSMUSG00000026492.12	Tfb2m	chr1	protein_coding	transcription factor B2, mitochondrial
chr1	179359692	179361198	-	179356919	179361198	A3SS	0.33	50	50	ENSMUST00000150778.2	ENSMUSG00000026492.12	Tfb2m	chr1	protein_coding	transcription factor B2, mitochondrial
chr1	179360289	179361198	-	179356919	179361198	A3SS	0.33	50	50	ENSMUST00000150778.2	ENSMUSG00000026492.12	Tfb2m	chr1	protein_coding	transcription factor B2, mitochondrial
chr1	179356919	179358869	-	179356919	179361198	A5SS	0.5	50	50	ENSMUST00000150778.2	ENSMUSG00000026492.12	Tfb2m	chr1	protein_coding	transcription factor B2, mitochondrial
chr1	179373023	179373387	-	179370022	179373387	A3SS	0.33	50	50	ENSMUST00000129982.8	ENSMUSG00000026492.12	Tfb2m	chr1	protein_coding	transcription factor B2, mitochondrial
chr1	179370022	179370490	-	179370022	179373387	A5SS	0.33	50	50	ENSMUST00000129982.8	ENSMUSG00000026492.12	Tfb2m	chr1	protein_coding	transcription factor B2, mitochondrial
chr1	179421031	179429267	+	179420431	179429267	A5SS	0.5	50	50	ENSMUST00000040706.9	ENSMUSG00000038949.9	Cnst	chr1	protein_coding	consortin, connexin sorting protein
chr1	179504036	179506445	+	179504036;179505735	179505606;179506445	ES	0.5	50	50	ENSMUST00000040538.10	ENSMUSG00000038936.14	Sccpdh	chr1	protein_coding	saccharopine dehydrogenase (putative)
chr1	179509117	179511770	+	179509117;179509272	179509216;179511770	ES	0.5	50	50	ENSMUST00000040538.10	ENSMUSG00000038936.14	Sccpdh	chr1	protein_coding	saccharopine dehydrogenase (putative)
chr1	179526320	179526544	-	179526320	179526553	A5SS	0.5	50	50	ENSMUST00000131716.4	ENSMUSG00000087236.4	Kif28	chr1	protein_coding	kinesin family member 28
chr1	179525517	179526859	-	179526650	179526859	A3SS&ES	0.5	50	50	ENSMUST00000221136.2	ENSMUSG00000087236.4	Kif28	chr1	protein_coding	kinesin family member 28
chr1	179525517;179526650	179526173;179526859	-	179525517	179526859	cassetteExon	0.5	100	100	ENSMUST00000211943.3	ENSMUSG00000087236.4	Kif28	chr1	protein_coding	kinesin family member 28
chr1	179538910;179540505	179540017;179541438	-	179538910	179541438	cassetteExon	0.5	100	100	ENSMUST00000211943.3	ENSMUSG00000087236.4	Kif28	chr1	protein_coding	kinesin family member 28
chr1	179597024	179598364	-	179597024;179598285	179598154;179598364	ES	0.5	50	50	ENSMUST00000027768.14	ENSMUSG00000026491.14	Ahctf1	chr1	protein_coding	AT hook containing transcription factor 1
chr1	179581637;179582189	179582056;179583014	-	179581637	179583014	cassetteExon	0.5	100	100	ENSMUST00000027768.14	ENSMUSG00000026491.14	Ahctf1	chr1	protein_coding	AT hook containing transcription factor 1
chr1	179574085	179574745	-	179574093	179574745	A3SS	0.5	50	50	ENSMUST00000027768.14	ENSMUSG00000026491.14	Ahctf1	chr1	protein_coding	AT hook containing transcription factor 1
chr1	179591167	179593443	-	179591238	179593443	A3SS	0.5	50	50	ENSMUST00000027768.14	ENSMUSG00000026491.14	Ahctf1	chr1	protein_coding	AT hook containing transcription factor 1
chr1	179912070	179921946	+	179912070;179921751	179921509;179921946	ES	0.5	50	50	ENSMUST00000097453.9	ENSMUSG00000026490.19	Cdc42bpa	chr1	protein_coding	CDC42 binding protein kinase alpha
chr1	179936843	179939310	+	179936843;179938934	179938829;179939310	ES	0.5	50	50	ENSMUST00000097453.9	ENSMUSG00000026490.19	Cdc42bpa	chr1	protein_coding	CDC42 binding protein kinase alpha
chr1	179827018;179852367	179852210;179859070	+	179827018	179859070	cassetteExon	0.5	100	100	ENSMUST00000097453.9	ENSMUSG00000026490.19	Cdc42bpa	chr1	protein_coding	CDC42 binding protein kinase alpha
chr1	179945308;179961945	179961862;179964217	+	179945308	179964217	cassetteExon	0.5	100	100	ENSMUST00000097453.9	ENSMUSG00000026490.19	Cdc42bpa	chr1	protein_coding	CDC42 binding protein kinase alpha
chr1	179978842;179983545	179983360;179987171	+	179978842	179987171	cassetteExon	0.5	100	100	ENSMUST00000097453.9	ENSMUSG00000026490.19	Cdc42bpa	chr1	protein_coding	CDC42 binding protein kinase alpha
chr1	179867765	179868426	+	179867765	179889355	A3SS	0.5	50	50	ENSMUST00000097453.9	ENSMUSG00000026490.19	Cdc42bpa	chr1	protein_coding	CDC42 binding protein kinase alpha
chr1	179945308	179946301	+	179945308	179964217	A3SS	0.2	50	50	ENSMUST00000097453.9	ENSMUSG00000026490.19	Cdc42bpa	chr1	protein_coding	CDC42 binding protein kinase alpha
chr1	179945308	179951489	+	179945308	179964217	A3SS	0.2	50	50	ENSMUST00000097453.9	ENSMUSG00000026490.19	Cdc42bpa	chr1	protein_coding	CDC42 binding protein kinase alpha
chr1	179945308	179958361	+	179945308	179964217	A3SS	0.2	50	50	ENSMUST00000097453.9	ENSMUSG00000026490.19	Cdc42bpa	chr1	protein_coding	CDC42 binding protein kinase alpha
chr1	179803559	179826927	+	179788852	179826927	A5SS	0.33	50	50	ENSMUST00000097453.9	ENSMUSG00000026490.19	Cdc42bpa	chr1	protein_coding	CDC42 binding protein kinase alpha
chr1	179819059	179826927	+	179788852	179826927	A5SS	0.33	50	50	ENSMUST00000097453.9	ENSMUSG00000026490.19	Cdc42bpa	chr1	protein_coding	CDC42 binding protein kinase alpha
chr1	179945308	179961862	+	179945308;179951527	179951489;179961862	ES	0.25	50	50	ENSMUST00000111117.8	ENSMUSG00000026490.19	Cdc42bpa	chr1	protein_coding	CDC42 binding protein kinase alpha
chr1	179945308;179946348	179946301;179951489	+	179945308	179951489	cassetteExon	0.5	100	100	ENSMUST00000111117.8	ENSMUSG00000026490.19	Cdc42bpa	chr1	protein_coding	CDC42 binding protein kinase alpha
chr1	179945308;179946348	179946301;179961862	+	179945308;179951527	179951489;179961862	MXE	0.5	100	100	ENSMUST00000111117.8	ENSMUSG00000026490.19	Cdc42bpa	chr1	protein_coding	CDC42 binding protein kinase alpha
chr1	179945308;179958465	179958361;179961862	+	179945308;179951527	179951489;179961862	MXE	0.5	100	100	ENSMUST00000111117.8	ENSMUSG00000026490.19	Cdc42bpa	chr1	protein_coding	CDC42 binding protein kinase alpha
chr1	179945308;179946348	179946301;179961862	+	179945308	179961862	cassetteExon	0.5	100	100	ENSMUST00000076687.12	ENSMUSG00000026490.19	Cdc42bpa	chr1	protein_coding	CDC42 binding protein kinase alpha
chr1	179945308;179958465	179958361;179961862	+	179945308	179961862	cassetteExon	0.5	100	100	ENSMUST00000076687.12	ENSMUSG00000026490.19	Cdc42bpa	chr1	protein_coding	CDC42 binding protein kinase alpha
chr1	179946348	179961862	+	179946348;179951527	179951489;179961862	ES	0.25	50	50	ENSMUST00000212756.2	ENSMUSG00000026490.19	Cdc42bpa	chr1	protein_coding	CDC42 binding protein kinase alpha
chr1	179945308;179958465	179958361;179961862	+	179945308;179951527	179946301;179961862	MXE	0.5	100	100	ENSMUST00000212756.2	ENSMUSG00000026490.19	Cdc42bpa	chr1	protein_coding	CDC42 binding protein kinase alpha
chr1	179946348;179958465	179958361;179961862	+	179946348;179951527	179951489;179961862	MXE	0.5	100	100	ENSMUST00000212756.2	ENSMUSG00000026490.19	Cdc42bpa	chr1	protein_coding	CDC42 binding protein kinase alpha
chr1	179819059	179826927	+	179803559	179826927	A5SS	0.33	50	50	ENSMUST00000143350.8	ENSMUSG00000026490.19	Cdc42bpa	chr1	protein_coding	CDC42 binding protein kinase alpha
chr1	179945308;179946348	179946301;179958361	+	179945308	179958361	cassetteExon	0.5	100	100	ENSMUST00000133890.8	ENSMUSG00000026490.19	Cdc42bpa	chr1	protein_coding	CDC42 binding protein kinase alpha
chr1	179945308;179946348	179946301;179961862	+	179945308;179958465	179958361;179961862	MXE	0.5	100	100	ENSMUST00000133890.8	ENSMUSG00000026490.19	Cdc42bpa	chr1	protein_coding	CDC42 binding protein kinase alpha
chr1	179946348	179961862	+	179946348;179958465	179958361;179961862	ES	0.25	50	50	ENSMUST00000135056.8	ENSMUSG00000026490.19	Cdc42bpa	chr1	protein_coding	CDC42 binding protein kinase alpha
chr1	179945308;179951527	179951489;179961862	+	179945308;179958465	179946301;179961862	MXE	0.5	100	100	ENSMUST00000135056.8	ENSMUSG00000026490.19	Cdc42bpa	chr1	protein_coding	CDC42 binding protein kinase alpha
chr1	179936843	179939310	+	179938934	179939310	5pMXE	0.5	50	50	ENSMUST00000145181.2	ENSMUSG00000026490.19	Cdc42bpa	chr1	protein_coding	CDC42 binding protein kinase alpha
chr1	179945308	179961862	+	179951527	179961862	5pMXE	0.25	50	50	ENSMUST00000145274.2	ENSMUSG00000026490.19	Cdc42bpa	chr1	protein_coding	CDC42 binding protein kinase alpha
chr1	179946348	179961862	+	179951527	179961862	5pMXE	0.25	50	50	ENSMUST00000145274.2	ENSMUSG00000026490.19	Cdc42bpa	chr1	protein_coding	CDC42 binding protein kinase alpha
chr1	179958465	179961862	+	179951527	179961862	A5SS	0.25	50	50	ENSMUST00000145274.2	ENSMUSG00000026490.19	Cdc42bpa	chr1	protein_coding	CDC42 binding protein kinase alpha
chr1	179997279	179997908	-	179997279;179997767	179997627;179997908	ES	0.5	50	50	ENSMUST00000170472.8	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180001890	180006448	-	180001890;180006208	180006142;180006448	ES	0.5	50	50	ENSMUST00000170472.8	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180009812	180021168	-	180009812	180021001	5pMXE	0.14	50	50	ENSMUST00000170472.8	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180009812	180023438	-	180009812	180021001	5pMXE	0.14	50	50	ENSMUST00000170472.8	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180009812	180023533	-	180009812	180021001	5pMXE	0.14	50	50	ENSMUST00000170472.8	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180009812	180027052	-	180009812	180021001	5pMXE	0.14	50	50	ENSMUST00000170472.8	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180006849;180007157	180007065;180009627	-	180006849	180009627	cassetteExon	0.5	100	100	ENSMUST00000170472.8	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180006849;180008562	180008464;180009627	-	180006849	180009627	cassetteExon	0.5	100	100	ENSMUST00000170472.8	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	179994892	180009627	-	180006849	180009627	A3SS&ES	0.25	50	50	ENSMUST00000170472.8	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180009812	180010028	-	180009812	180021001	A5SS	0.14	50	50	ENSMUST00000170472.8	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180009812	180013466	-	180009812	180021001	A5SS	0.14	50	50	ENSMUST00000170472.8	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180006849	180023438	-	180006849;180009812	180009627;180023438	ES	0.25	50	50	ENSMUST00000027766.13	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180009812	180027052	-	180009812	180023438	5pMXE	0.14	50	50	ENSMUST00000027766.13	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180009812;180013562	180013466;180023438	-	180009812	180023438	cassetteExon	0.5	100	100	ENSMUST00000027766.13	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180009812	180010028	-	180009812	180023438	A5SS	0.14	50	50	ENSMUST00000027766.13	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180009812	180021168	-	180009812	180023438	A5SS	0.14	50	50	ENSMUST00000027766.13	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180009812	180023533	-	180009812	180023438	A5SS	0.14	50	50	ENSMUST00000027766.13	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180001890	180023438	-	180009812	180023438	A3SS&ES	0.25	50	50	ENSMUST00000160879.7	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180006849	180023438	-	180009812	180023438	A3SS&ES	0.25	50	50	ENSMUST00000160879.7	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180007157	180009627	-	179994892	180009627	A3SS	0.25	50	50	ENSMUST00000160879.7	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180008562	180009627	-	179994892	180009627	A3SS	0.25	50	50	ENSMUST00000160879.7	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180001890	180006448	-	180001890	180006142	5pMXE	0.33	50	50	ENSMUST00000161300.7	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180001890	180023438	-	180001890	180006142	5pMXE	0.33	50	50	ENSMUST00000161300.7	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	179997279	179997908	-	179997767	179997908	3pMXE	0.5	50	50	ENSMUST00000162769.8	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180001890;180006849	180006448;180023438	-	180001890	180023438	cassetteExon	0.5	100	100	ENSMUST00000162769.8	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180013562	180023438	-	180001890	180023438	A3SS	0.25	50	50	ENSMUST00000162769.8	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180006849	180023438	-	180006849	180009627	5pMXE	0.25	50	50	ENSMUST00000161632.3	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180001890	180023438	-	180001890	180006448	5pMXE	0.33	50	50	ENSMUST00000159591.2	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180001890	180023438	-	180006849	180023438	3pMXE	0.25	50	50	ENSMUST00000161379.2	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180013562	180023438	-	180006849	180023438	A3SS	0.25	50	50	ENSMUST00000161379.2	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180006849	180007065	-	180006849	180023438	A5SS	0.25	50	50	ENSMUST00000161379.2	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180006849	180008464	-	180006849	180023438	A5SS	0.25	50	50	ENSMUST00000161379.2	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180009812	180027052	-	180009812	180023533	5pMXE	0.14	50	50	ENSMUST00000161814.8	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180009812	180010028	-	180009812	180023533	A5SS	0.14	50	50	ENSMUST00000161814.8	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180009812	180013466	-	180009812	180023533	A5SS	0.14	50	50	ENSMUST00000161814.8	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180009812	180021168	-	180009812	180023533	A5SS	0.14	50	50	ENSMUST00000161814.8	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180009812	180013466	-	180009812	180010028	5pMXE	0.14	50	50	ENSMUST00000162725.8	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180009812	180021168	-	180009812	180010028	5pMXE	0.14	50	50	ENSMUST00000162725.8	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180009812	180027052	-	180009812	180010028	5pMXE	0.14	50	50	ENSMUST00000162725.8	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180006849;180007157	180007065;180009627	-	180006849;180008562	180008464;180009627	MXE	0.5	100	100	ENSMUST00000160121.8	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180009812	180027052	-	180009812	180021168	5pMXE	0.14	50	50	ENSMUST00000159914.8	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180009812	180013466	-	180009812	180021168	A5SS	0.14	50	50	ENSMUST00000159914.8	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180009812	180013466	-	180009812	180027052	A5SS	0.14	50	50	ENSMUST00000161743.3	ENSMUSG00000026489.14	Coq8a	chr1	protein_coding	coenzyme Q8A
chr1	180057049	180057407	-	180057052	180057407	A3SS	0.5	50	50	ENSMUST00000130711.8	ENSMUSG00000010609.16	Psen2	chr1	protein_coding	presenilin 2
chr1	180056526	180056946	-	180056526	180056951	A5SS	0.5	50	50	ENSMUST00000130711.8	ENSMUSG00000010609.16	Psen2	chr1	protein_coding	presenilin 2
chr1	180057052	180057535	-	180057052	180057407	A5SS	0.5	50	50	ENSMUST00000130711.8	ENSMUSG00000010609.16	Psen2	chr1	protein_coding	presenilin 2
chr1	180073322	180083788	-	180073322	180080603	5pMXE	0.2	50	50	ENSMUST00000111106.8	ENSMUSG00000010609.16	Psen2	chr1	protein_coding	presenilin 2
chr1	180073322	180090521	-	180073322	180080603	5pMXE	0.2	50	50	ENSMUST00000111106.8	ENSMUSG00000010609.16	Psen2	chr1	protein_coding	presenilin 2
chr1	180073322	180073429	-	180073322	180080603	A5SS	0.2	50	50	ENSMUST00000111106.8	ENSMUSG00000010609.16	Psen2	chr1	protein_coding	presenilin 2
chr1	180073322	180074442	-	180073322	180080603	A5SS	0.2	50	50	ENSMUST00000111106.8	ENSMUSG00000010609.16	Psen2	chr1	protein_coding	presenilin 2
chr1	180073322	180090521	-	180073322	180083788	5pMXE	0.2	50	50	ENSMUST00000111108.10	ENSMUSG00000010609.16	Psen2	chr1	protein_coding	presenilin 2
chr1	180073322	180073429	-	180073322	180083788	A5SS	0.2	50	50	ENSMUST00000111108.10	ENSMUSG00000010609.16	Psen2	chr1	protein_coding	presenilin 2
chr1	180073322	180074442	-	180073322	180083788	A5SS	0.2	50	50	ENSMUST00000111108.10	ENSMUSG00000010609.16	Psen2	chr1	protein_coding	presenilin 2
chr1	180073322	180074442	-	180073322	180073429	5pMXE	0.2	50	50	ENSMUST00000010753.14	ENSMUSG00000010609.16	Psen2	chr1	protein_coding	presenilin 2
chr1	180073322	180090521	-	180073322	180073429	5pMXE	0.2	50	50	ENSMUST00000010753.14	ENSMUSG00000010609.16	Psen2	chr1	protein_coding	presenilin 2
chr1	180073322	180074442	-	180073322	180090521	A5SS	0.2	50	50	ENSMUST00000133340.2	ENSMUSG00000010609.16	Psen2	chr1	protein_coding	presenilin 2
chr1	180265928	180270109	-	180265928;180266679	180266671;180270109	ES	0.5	50	50	ENSMUST00000136521.2	ENSMUSG00000053963.8	Stum	chr1	protein_coding	mechanosensory transduction mediator
chr1	180265928	180266021	-	180265928	180266671	A5SS	0.33	50	50	ENSMUST00000136521.2	ENSMUSG00000053963.8	Stum	chr1	protein_coding	mechanosensory transduction mediator
chr1	180270288	180289730	-	180270288	180310693	A5SS	0.25	50	50	ENSMUST00000136521.2	ENSMUSG00000053963.8	Stum	chr1	protein_coding	mechanosensory transduction mediator
chr1	180270288	180289734	-	180270288	180310693	A5SS	0.25	50	50	ENSMUST00000136521.2	ENSMUSG00000053963.8	Stum	chr1	protein_coding	mechanosensory transduction mediator
chr1	180270288	180293072	-	180270288	180310693	A5SS	0.25	50	50	ENSMUST00000136521.2	ENSMUSG00000053963.8	Stum	chr1	protein_coding	mechanosensory transduction mediator
chr1	180265928	180266021	-	180265928	180270109	A5SS	0.33	50	50	ENSMUST00000211561.2	ENSMUSG00000053963.8	Stum	chr1	protein_coding	mechanosensory transduction mediator
chr1	180270288	180293072	-	180270288	180289730	5pMXE	0.25	50	50	ENSMUST00000210737.2	ENSMUSG00000053963.8	Stum	chr1	protein_coding	mechanosensory transduction mediator
chr1	180270288	180289734	-	180270288	180289730	A5SS	0.25	50	50	ENSMUST00000210737.2	ENSMUSG00000053963.8	Stum	chr1	protein_coding	mechanosensory transduction mediator
chr1	180270288	180293072	-	180270288	180289734	5pMXE	0.25	50	50	ENSMUST00000210107.2	ENSMUSG00000053963.8	Stum	chr1	protein_coding	mechanosensory transduction mediator
chr1	180396938	180401217	+	180396718	180401217	A5SS	0.5	50	50	ENSMUST00000194608.2	ENSMUSG00000026496.12	Parp1	chr1	protein_coding	poly (ADP-ribose) polymerase family, member 1
chr1	180478401	180486628	+	180478401;180479531	180479427;180486628	ES	0.5	50	50	ENSMUST00000192561.6	ENSMUSG00000058729.14	Lin9	chr1	protein_coding	lin-9 homolog (C. elegans)
chr1	180475898	180476127	+	180475898	180478307	A3SS	0.5	50	50	ENSMUST00000192561.6	ENSMUSG00000058729.14	Lin9	chr1	protein_coding	lin-9 homolog (C. elegans)
chr1	180489167	180493374	+	180489167	180493348	A3SS	0.5	50	50	ENSMUST00000192561.6	ENSMUSG00000058729.14	Lin9	chr1	protein_coding	lin-9 homolog (C. elegans)
chr1	180495023	180496331	+	180495023	180496329	A3SS	0.5	50	50	ENSMUST00000192561.6	ENSMUSG00000058729.14	Lin9	chr1	protein_coding	lin-9 homolog (C. elegans)
chr1	180639514;180640311	180640255;180641036	-	180639514	180641036	cassetteExon	0.5	100	100	ENSMUST00000161308.8	ENSMUSG00000060743.13	H3f3a	chr1	protein_coding	H3.3 histone A
chr1	180639514;180640351	180640255;180641036	-	180639514	180641036	cassetteExon	0.5	100	100	ENSMUST00000161308.8	ENSMUSG00000060743.13	H3f3a	chr1	protein_coding	H3.3 histone A
chr1	180630767	180637682	-	180630770	180637682	A3SS	0.5	50	50	ENSMUST00000161308.8	ENSMUSG00000060743.13	H3f3a	chr1	protein_coding	H3.3 histone A
chr1	180639551	180641036	-	180639514	180641036	A3SS	0.25	50	50	ENSMUST00000161308.8	ENSMUSG00000060743.13	H3f3a	chr1	protein_coding	H3.3 histone A
chr1	180640311	180641036	-	180639551	180641036	A3SS	0.25	50	50	ENSMUST00000159789.2	ENSMUSG00000060743.13	H3f3a	chr1	protein_coding	H3.3 histone A
chr1	180640351	180641036	-	180639551	180641036	A3SS	0.25	50	50	ENSMUST00000159789.2	ENSMUSG00000060743.13	H3f3a	chr1	protein_coding	H3.3 histone A
chr1	180640311	180641036	-	180640351	180641036	A3SS	0.25	50	50	ENSMUST00000162118.8	ENSMUSG00000060743.13	H3f3a	chr1	protein_coding	H3.3 histone A
chr1	180774330	180779697	+	180774330;180776457	180776378;180779697	ES	0.5	50	50	ENSMUST00000161847.8	ENSMUSG00000026519.17	Tmem63a	chr1	protein_coding	transmembrane protein 63a
chr1	180770124	180774131	+	180770075	180774131	A5SS	0.16	50	50	ENSMUST00000161847.8	ENSMUSG00000026519.17	Tmem63a	chr1	protein_coding	transmembrane protein 63a
chr1	180770254	180774131	+	180770075	180774131	A5SS	0.16	50	50	ENSMUST00000161847.8	ENSMUSG00000026519.17	Tmem63a	chr1	protein_coding	transmembrane protein 63a
chr1	180771661	180774131	+	180770075	180774131	A5SS	0.16	50	50	ENSMUST00000161847.8	ENSMUSG00000026519.17	Tmem63a	chr1	protein_coding	transmembrane protein 63a
chr1	180773562	180774131	+	180770075	180774131	A5SS	0.16	50	50	ENSMUST00000161847.8	ENSMUSG00000026519.17	Tmem63a	chr1	protein_coding	transmembrane protein 63a
chr1	180774004	180774131	+	180770075	180774131	A5SS	0.16	50	50	ENSMUST00000161847.8	ENSMUSG00000026519.17	Tmem63a	chr1	protein_coding	transmembrane protein 63a
chr1	180770254	180774131	+	180770124	180774131	A5SS	0.16	50	50	ENSMUST00000162283.8	ENSMUSG00000026519.17	Tmem63a	chr1	protein_coding	transmembrane protein 63a
chr1	180771661	180774131	+	180770124	180774131	A5SS	0.16	50	50	ENSMUST00000162283.8	ENSMUSG00000026519.17	Tmem63a	chr1	protein_coding	transmembrane protein 63a
chr1	180773562	180774131	+	180770124	180774131	A5SS	0.16	50	50	ENSMUST00000162283.8	ENSMUSG00000026519.17	Tmem63a	chr1	protein_coding	transmembrane protein 63a
chr1	180774004	180774131	+	180770124	180774131	A5SS	0.16	50	50	ENSMUST00000162283.8	ENSMUSG00000026519.17	Tmem63a	chr1	protein_coding	transmembrane protein 63a
chr1	180771661	180774131	+	180770254	180774131	A5SS	0.16	50	50	ENSMUST00000159436.8	ENSMUSG00000026519.17	Tmem63a	chr1	protein_coding	transmembrane protein 63a
chr1	180773562	180774131	+	180770254	180774131	A5SS	0.16	50	50	ENSMUST00000159436.8	ENSMUSG00000026519.17	Tmem63a	chr1	protein_coding	transmembrane protein 63a
chr1	180774004	180774131	+	180770254	180774131	A5SS	0.16	50	50	ENSMUST00000159436.8	ENSMUSG00000026519.17	Tmem63a	chr1	protein_coding	transmembrane protein 63a
chr1	180773562	180774131	+	180771661	180774131	A5SS	0.16	50	50	ENSMUST00000161523.8	ENSMUSG00000026519.17	Tmem63a	chr1	protein_coding	transmembrane protein 63a
chr1	180774004	180774131	+	180771661	180774131	A5SS	0.16	50	50	ENSMUST00000161523.8	ENSMUSG00000026519.17	Tmem63a	chr1	protein_coding	transmembrane protein 63a
chr1	180774004	180774131	+	180773562	180774131	A5SS	0.16	50	50	ENSMUST00000160508.2	ENSMUSG00000026519.17	Tmem63a	chr1	protein_coding	transmembrane protein 63a
chr1	180774330	180779697	+	180774330	180776378	3pMXE	0.5	50	50	ENSMUST00000160536.2	ENSMUSG00000026519.17	Tmem63a	chr1	protein_coding	transmembrane protein 63a
chr1	180818083	180819498	-	180803846	180819498	A3SS	0.5	50	50	ENSMUST00000154133.8	ENSMUSG00000038776.14	Ephx1	chr1	protein_coding	epoxide hydrolase 1, microsomal
chr1	180821610	180822193	-	180821652	180822193	A3SS	0.5	50	50	ENSMUST00000154133.8	ENSMUSG00000038776.14	Ephx1	chr1	protein_coding	epoxide hydrolase 1, microsomal
chr1	180829551	180848333	-	180829551	180844992	5pMXE	0.5	50	50	ENSMUST00000036928.12	ENSMUSG00000038776.14	Ephx1	chr1	protein_coding	epoxide hydrolase 1, microsomal
chr1	180983536	180993746	+	180983536;180989780	180989640;180993746	ES	0.5	50	50	ENSMUST00000193907.6	ENSMUSG00000062169.14	Cnih4	chr1	protein_coding	cornichon family AMPA receptor auxiliary protein 4
chr1	180981368	180983424	+	180972466	180983424	A5SS	0.33	50	50	ENSMUST00000193907.6	ENSMUSG00000062169.14	Cnih4	chr1	protein_coding	cornichon family AMPA receptor auxiliary protein 4
chr1	180982469	180983424	+	180972466	180983424	A5SS	0.33	50	50	ENSMUST00000193907.6	ENSMUSG00000062169.14	Cnih4	chr1	protein_coding	cornichon family AMPA receptor auxiliary protein 4
chr1	180982469	180983424	+	180981368	180983424	A5SS	0.5	50	50	ENSMUST00000134115.8	ENSMUSG00000062169.14	Cnih4	chr1	protein_coding	cornichon family AMPA receptor auxiliary protein 4
chr1	181005396;181008213	181008031;181008869	-	181005396	181008869	cassetteExon	0.5	100	100	ENSMUST00000162819.9	ENSMUSG00000038733.15	Wdr26	chr1	protein_coding	WD repeat domain 26
chr1	181010131	181010334	-	181009054	181010334	A3SS	0.5	50	50	ENSMUST00000162819.9	ENSMUSG00000038733.15	Wdr26	chr1	protein_coding	WD repeat domain 26
chr1	181030725	181036616	-	181030725	181036568	A5SS	0.5	50	50	ENSMUST00000162819.9	ENSMUSG00000038733.15	Wdr26	chr1	protein_coding	WD repeat domain 26
chr1	181030789	181036616	-	181030725	181036616	A3SS	0.5	50	50	ENSMUST00000162963.8	ENSMUSG00000038733.15	Wdr26	chr1	protein_coding	WD repeat domain 26
chr1	181005396	181008869	-	181008213	181008869	3pMXE	0.5	50	50	ENSMUST00000159290.2	ENSMUSG00000038733.15	Wdr26	chr1	protein_coding	WD repeat domain 26
chr1	181277647	181286790	+	181277647;181282303	181282160;181286790	ES	0.5	50	50	ENSMUST00000161880.8	ENSMUSG00000026514.15	Cnih3	chr1	protein_coding	cornichon family AMPA receptor auxiliary protein 3
chr1	181237241	181277535	+	181237298	181277535	A5SS	0.33	50	50	ENSMUST00000161880.8	ENSMUSG00000026514.15	Cnih3	chr1	protein_coding	cornichon family AMPA receptor auxiliary protein 3
chr1	181237322	181277535	+	181237298	181277535	A5SS	0.33	50	50	ENSMUST00000161880.8	ENSMUSG00000026514.15	Cnih3	chr1	protein_coding	cornichon family AMPA receptor auxiliary protein 3
chr1	181237322	181277535	+	181237241	181277535	A5SS	0.33	50	50	ENSMUST00000027795.14	ENSMUSG00000026514.15	Cnih3	chr1	protein_coding	cornichon family AMPA receptor auxiliary protein 3
chr1	181484628	181493557	+	181484628;181492527	181492341;181493557	ES	0.5	50	50	ENSMUST00000208001.2	ENSMUSG00000047369.18	Dnah14	chr1	protein_coding	dynein, axonemal, heavy chain 14
chr1	181591536	181596980	+	181591536;181593958	181593714;181596980	ES	0.5	50	50	ENSMUST00000208001.2	ENSMUSG00000047369.18	Dnah14	chr1	protein_coding	dynein, axonemal, heavy chain 14
chr1	181421121;181423217	181423065;181425929	+	181421121	181425929	cassetteExon	0.5	100	100	ENSMUST00000208001.2	ENSMUSG00000047369.18	Dnah14	chr1	protein_coding	dynein, axonemal, heavy chain 14
chr1	181543885;181546500	181546333;181547663	+	181543885	181547663	cassetteExon	0.5	100	100	ENSMUST00000208001.2	ENSMUSG00000047369.18	Dnah14	chr1	protein_coding	dynein, axonemal, heavy chain 14
chr1	181504654	181505116	+	181504654	181508284	A3SS	0.5	50	50	ENSMUST00000208001.2	ENSMUSG00000047369.18	Dnah14	chr1	protein_coding	dynein, axonemal, heavy chain 14
chr1	181481006	181481097	+	181479224	181481097	A5SS	0.5	50	50	ENSMUST00000208001.2	ENSMUSG00000047369.18	Dnah14	chr1	protein_coding	dynein, axonemal, heavy chain 14
chr1	181570528	181572298	+	181568898	181572298	A5SS	0.5	50	50	ENSMUST00000208001.2	ENSMUSG00000047369.18	Dnah14	chr1	protein_coding	dynein, axonemal, heavy chain 14
chr1	181481242	181484560	+	181481242	181504520	A3SS	0.5	50	50	ENSMUST00000193365.6	ENSMUSG00000047369.18	Dnah14	chr1	protein_coding	dynein, axonemal, heavy chain 14
chr1	181502024	181504520	+	181481242	181504520	A5SS	0.5	50	50	ENSMUST00000193365.6	ENSMUSG00000047369.18	Dnah14	chr1	protein_coding	dynein, axonemal, heavy chain 14
chr1	181633654	181636496	+	181633654	181642075	A3SS	0.5	50	50	ENSMUST00000195458.2	ENSMUSG00000047369.18	Dnah14	chr1	protein_coding	dynein, axonemal, heavy chain 14
chr1	181641756	181642075	+	181633654	181642075	A5SS	0.5	50	50	ENSMUST00000195458.2	ENSMUSG00000047369.18	Dnah14	chr1	protein_coding	dynein, axonemal, heavy chain 14
chr1	181666121	181670374	-	181666121	181669853	5pMXE	0.33	50	50	ENSMUST00000005003.12	ENSMUSG00000004880.12	Lbr	chr1	protein_coding	lamin B receptor
chr1	181666121;181667367	181667265;181669853	-	181666121	181669853	cassetteExon	0.5	100	100	ENSMUST00000005003.12	ENSMUSG00000004880.12	Lbr	chr1	protein_coding	lamin B receptor
chr1	181649162	181653187	-	181649192	181653187	A3SS	0.5	50	50	ENSMUST00000005003.12	ENSMUSG00000004880.12	Lbr	chr1	protein_coding	lamin B receptor
chr1	181668175	181669853	-	181666121	181669853	A3SS	0.33	50	50	ENSMUST00000005003.12	ENSMUSG00000004880.12	Lbr	chr1	protein_coding	lamin B receptor
chr1	181666121;181667367	181667265;181670374	-	181666121	181670374	cassetteExon	0.5	100	100	ENSMUST00000193030.6	ENSMUSG00000004880.12	Lbr	chr1	protein_coding	lamin B receptor
chr1	181667367	181669853	-	181667367;181668175	181668065;181669853	ES	0.33	50	50	ENSMUST00000191878.6	ENSMUSG00000004880.12	Lbr	chr1	protein_coding	lamin B receptor
chr1	181666121	181669853	-	181666121	181667265	A5SS&ES	0.33	50	50	ENSMUST00000195299.6	ENSMUSG00000004880.12	Lbr	chr1	protein_coding	lamin B receptor
chr1	181667367	181668065	-	181667367	181670374	A5SS	0.33	50	50	ENSMUST00000195299.6	ENSMUSG00000004880.12	Lbr	chr1	protein_coding	lamin B receptor
chr1	181667367	181669853	-	181667367	181670374	A5SS	0.33	50	50	ENSMUST00000195299.6	ENSMUSG00000004880.12	Lbr	chr1	protein_coding	lamin B receptor
chr1	181747194	181751125	-	181747194;181749333	181749223;181751125	ES	0.25	50	50	ENSMUST00000193703.6	ENSMUSG00000022995.17	Enah	chr1	protein_coding	ENAH actin regulator
chr1	181735941;181739224	181739162;181740872	-	181735941	181740872	cassetteExon	0.5	100	100	ENSMUST00000193703.6	ENSMUSG00000022995.17	Enah	chr1	protein_coding	ENAH actin regulator
chr1	181758327;181758750	181758739;181783959	-	181758327	181783959	cassetteExon	0.5	100	100	ENSMUST00000193703.6	ENSMUSG00000022995.17	Enah	chr1	protein_coding	ENAH actin regulator
chr1	181758327;181763281	181763225;181783959	-	181758327	181783959	cassetteExon	0.5	100	100	ENSMUST00000193703.6	ENSMUSG00000022995.17	Enah	chr1	protein_coding	ENAH actin regulator
chr1	181758327;181772617	181772606;181783959	-	181758327	181783959	cassetteExon	0.5	100	100	ENSMUST00000193703.6	ENSMUSG00000022995.17	Enah	chr1	protein_coding	ENAH actin regulator
chr1	181749525	181751125	-	181749333	181751125	A3SS	0.25	50	50	ENSMUST00000193703.6	ENSMUSG00000022995.17	Enah	chr1	protein_coding	ENAH actin regulator
chr1	181750065	181751125	-	181749333	181751125	A3SS	0.25	50	50	ENSMUST00000193703.6	ENSMUSG00000022995.17	Enah	chr1	protein_coding	ENAH actin regulator
chr1	181789484	181841863	-	181789484	181847095	A5SS	0.5	50	50	ENSMUST00000193703.6	ENSMUSG00000022995.17	Enah	chr1	protein_coding	ENAH actin regulator
chr1	181747194	181751125	-	181747194;181750065	181749223;181751125	ES	0.25	50	50	ENSMUST00000177811.8	ENSMUSG00000022995.17	Enah	chr1	protein_coding	ENAH actin regulator
chr1	181758327;181758750	181758739;181783959	-	181758327;181772617	181772606;181783959	MXE	0.5	100	100	ENSMUST00000177811.8	ENSMUSG00000022995.17	Enah	chr1	protein_coding	ENAH actin regulator
chr1	181758327;181763281	181763225;181783959	-	181758327;181772617	181772606;181783959	MXE	0.5	100	100	ENSMUST00000177811.8	ENSMUSG00000022995.17	Enah	chr1	protein_coding	ENAH actin regulator
chr1	181749525	181751125	-	181750065	181751125	A3SS	0.25	50	50	ENSMUST00000177811.8	ENSMUSG00000022995.17	Enah	chr1	protein_coding	ENAH actin regulator
chr1	181747194;181749525	181749223;181751125	-	181747194	181751125	cassetteExon	0.5	100	100	ENSMUST00000193074.6	ENSMUSG00000022995.17	Enah	chr1	protein_coding	ENAH actin regulator
chr1	181750065	181751125	-	181747194	181751125	A3SS	0.25	50	50	ENSMUST00000193074.6	ENSMUSG00000022995.17	Enah	chr1	protein_coding	ENAH actin regulator
chr1	181758327;181758750	181758739;181783959	-	181758327;181763281	181763225;181783959	MXE	0.5	100	100	ENSMUST00000078719.13	ENSMUSG00000022995.17	Enah	chr1	protein_coding	ENAH actin regulator
chr1	181952540;181956317	181956249;181958901	+	181952540	181958901	cassetteExon	0.5	100	100	ENSMUST00000111018.2	ENSMUSG00000026511.8	Srp9	chr1	protein_coding	signal recognition particle 9
chr1	181986904	181991846	-	181986904	181991958	A5SS	0.5	50	50	ENSMUST00000227629.2	ENSMUSG00000091013.4	Vmn1r1	chr1	protein_coding	vomeronasal 1 receptor 1
chr1	182107283	182109726	-	182107283	182110187	A5SS	0.5	50	50	ENSMUST00000035295.6	ENSMUSG00000038633.6	Degs1	chr1	protein_coding	delta(4)-desaturase, sphingolipid 1
chr1	182145570	182157439	-	182145570;182153957	182153819;182157439	ES	0.33	50	50	ENSMUST00000051431.10	ENSMUSG00000047539.10	Fbxo28	chr1	protein_coding	F-box protein 28
chr1	182145501	182157439	-	182153957	182157439	A3SS&ES	0.33	50	50	ENSMUST00000051431.10	ENSMUSG00000047539.10	Fbxo28	chr1	protein_coding	F-box protein 28
chr1	182145523	182153819	-	182145570	182153819	A3SS	0.5	50	50	ENSMUST00000051431.10	ENSMUSG00000047539.10	Fbxo28	chr1	protein_coding	F-box protein 28
chr1	182145501	182157439	-	182145570	182157439	A3SS	0.33	50	50	ENSMUST00000192544.6	ENSMUSG00000047539.10	Fbxo28	chr1	protein_coding	F-box protein 28
chr1	182145570	182157439	-	182153957	182157439	A3SS&ES	0.33	50	50	ENSMUST00000194213.2	ENSMUSG00000047539.10	Fbxo28	chr1	protein_coding	F-box protein 28
chr1	182272374	182273887	+	182272374	182273839	A3SS	0.5	50	50	ENSMUST00000117245.2	ENSMUSG00000026510.11	Trp53bp2	chr1	protein_coding	transformation related protein 53 binding protein 2
chr1	182320435;182336490	182336357;182339772	-	182320435	182339772	cassetteExon	0.5	100	100	ENSMUST00000068505.10	ENSMUSG00000026509.16	Capn2	chr1	protein_coding	calpain 2
chr1	182318187	182319076	+	182317577	182319076	A5SS	0.5	50	50	ENSMUST00000192568.2	ENSMUSG00000102234.2	Gm37885	chr1	lncRNA	predicted gene, 37885
chr1	182432165	182435159	+	182432165	182432798	3pMXE	0.5	50	50	ENSMUST00000168514.7	ENSMUSG00000038599.15	Capn8	chr1	protein_coding	calpain 8
chr1	182455621	182456099	+	182455621	182456164	A3SS	0.5	50	50	ENSMUST00000048941.14	ENSMUSG00000038599.15	Capn8	chr1	protein_coding	calpain 8
chr1	182591961	182592571	+	182591678	182592571	A5SS	0.25	50	50	ENSMUST00000155229.7	ENSMUSG00000038576.16	Susd4	chr1	protein_coding	sushi domain containing 4
chr1	182592169	182592571	+	182591678	182592571	A5SS	0.25	50	50	ENSMUST00000155229.7	ENSMUSG00000038576.16	Susd4	chr1	protein_coding	sushi domain containing 4
chr1	182592299	182592571	+	182591678	182592571	A5SS	0.25	50	50	ENSMUST00000155229.7	ENSMUSG00000038576.16	Susd4	chr1	protein_coding	sushi domain containing 4
chr1	182592169	182592571	+	182591961	182592571	A5SS	0.25	50	50	ENSMUST00000153348.8	ENSMUSG00000038576.16	Susd4	chr1	protein_coding	sushi domain containing 4
chr1	182592299	182592571	+	182591961	182592571	A5SS	0.25	50	50	ENSMUST00000153348.8	ENSMUSG00000038576.16	Susd4	chr1	protein_coding	sushi domain containing 4
chr1	182592299	182592571	+	182592169	182592571	A5SS	0.25	50	50	ENSMUST00000193660.6	ENSMUSG00000038576.16	Susd4	chr1	protein_coding	sushi domain containing 4
chr1	182782447;182785634	182785511;182796579	+	182782447	182796579	cassetteExon	0.5	100	100	ENSMUST00000193687.7	ENSMUSG00000079164.11	Tlr5	chr1	protein_coding	toll-like receptor 5
chr1	182796706	182797251	+	182796706	182799936	A3SS	0.33	50	50	ENSMUST00000193687.7	ENSMUSG00000079164.11	Tlr5	chr1	protein_coding	toll-like receptor 5
chr1	182796706	182797275	+	182796706	182799936	A3SS	0.33	50	50	ENSMUST00000193687.7	ENSMUSG00000079164.11	Tlr5	chr1	protein_coding	toll-like receptor 5
chr1	182796706	182797275	+	182796706	182797251	A3SS	0.33	50	50	ENSMUST00000193539.6	ENSMUSG00000079164.11	Tlr5	chr1	protein_coding	toll-like receptor 5
chr1	182917440	182955060	-	182917440	182928944	5pMXE	0.33	50	50	ENSMUST00000171366.7	ENSMUSG00000030768.13	Disp1	chr1	protein_coding	dispatched RND transporter family member 1
chr1	182917440	182984516	-	182917440	182928944	5pMXE	0.33	50	50	ENSMUST00000171366.7	ENSMUSG00000030768.13	Disp1	chr1	protein_coding	dispatched RND transporter family member 1
chr1	182917440	182984516	-	182917440;182955187	182955060;182984516	ES	0.5	50	50	ENSMUST00000003035.12	ENSMUSG00000030768.13	Disp1	chr1	protein_coding	dispatched RND transporter family member 1
chr1	182955187	183002887	-	182955187;182984603	182984516;183002887	ES	0.5	50	50	ENSMUST00000003035.12	ENSMUSG00000030768.13	Disp1	chr1	protein_coding	dispatched RND transporter family member 1
chr1	182917440;182984603	182984516;183002887	-	182917440;182955187	182955060;183002887	MXE	0.5	100	100	ENSMUST00000195372.2	ENSMUSG00000030768.13	Disp1	chr1	protein_coding	dispatched RND transporter family member 1
chr1	183073567	183075898	-	183073567;183074145	183074039;183075898	ES	0.33	50	50	ENSMUST00000057062.12	ENSMUSG00000046836.14	Brox	chr1	protein_coding	BRO1 domain and CAAX motif containing
chr1	183076428	183078726	-	183076428	183078447	5pMXE	0.33	50	50	ENSMUST00000057062.12	ENSMUSG00000046836.14	Brox	chr1	protein_coding	BRO1 domain and CAAX motif containing
chr1	183064119	183065697	-	183064135	183065697	A3SS	0.5	50	50	ENSMUST00000057062.12	ENSMUSG00000046836.14	Brox	chr1	protein_coding	BRO1 domain and CAAX motif containing
chr1	183072738	183073471	-	183069400	183073471	A3SS	0.5	50	50	ENSMUST00000057062.12	ENSMUSG00000046836.14	Brox	chr1	protein_coding	BRO1 domain and CAAX motif containing
chr1	183074189	183075898	-	183074145	183075898	A3SS	0.33	50	50	ENSMUST00000057062.12	ENSMUSG00000046836.14	Brox	chr1	protein_coding	BRO1 domain and CAAX motif containing
chr1	183076428	183077203	-	183076428	183078447	A5SS	0.33	50	50	ENSMUST00000057062.12	ENSMUSG00000046836.14	Brox	chr1	protein_coding	BRO1 domain and CAAX motif containing
chr1	183076428	183077203	-	183076428	183078726	A5SS	0.33	50	50	ENSMUST00000163528.8	ENSMUSG00000046836.14	Brox	chr1	protein_coding	BRO1 domain and CAAX motif containing
chr1	183073567;183074189	183074039;183075898	-	183073567	183075898	cassetteExon	0.5	100	100	ENSMUST00000194327.6	ENSMUSG00000046836.14	Brox	chr1	protein_coding	BRO1 domain and CAAX motif containing
chr1	183073567	183075898	-	183073567	183074039	5pMXE	0.5	50	50	ENSMUST00000194089.6	ENSMUSG00000046836.14	Brox	chr1	protein_coding	BRO1 domain and CAAX motif containing
chr1	183079172;183079468	183079382;183085613	+	183079172	183085613	cassetteExon	0.5	100	100	ENSMUST00000109166.8	ENSMUSG00000042901.11	Aida	chr1	protein_coding	axin interactor, dorsalization associated
chr1	183079172;183079989	183079818;183085613	+	183079172	183085613	cassetteExon	0.5	100	100	ENSMUST00000109166.8	ENSMUSG00000042901.11	Aida	chr1	protein_coding	axin interactor, dorsalization associated
chr1	183079172;183079989	183079818;183085613	+	183079172;183079468	183079382;183085613	MXE	0.5	100	100	ENSMUST00000191782.2	ENSMUSG00000042901.11	Aida	chr1	protein_coding	axin interactor, dorsalization associated
chr1	183095017	183097515	+	183095017	183103139	A3SS	0.5	50	50	ENSMUST00000193625.2	ENSMUSG00000042901.11	Aida	chr1	protein_coding	axin interactor, dorsalization associated
chr1	183099869	183103139	+	183095017	183103139	A5SS	0.5	50	50	ENSMUST00000193625.2	ENSMUSG00000042901.11	Aida	chr1	protein_coding	axin interactor, dorsalization associated
chr1	183125806	183126629	-	183125806	183132407	A5SS	0.5	50	50	ENSMUST00000194543.4	ENSMUSG00000056050.16	Mia3	chr1	protein_coding	melanoma inhibitory activity 3
chr1	183199760	183204454	+	183199760	183204347	A3SS	0.5	50	50	ENSMUST00000065900.10	ENSMUSG00000053461.10	Hhipl2	chr1	protein_coding	hedgehog interacting protein-like 2
chr1	183200324	183204347	+	183199760	183204347	A5SS	0.5	50	50	ENSMUST00000065900.10	ENSMUSG00000053461.10	Hhipl2	chr1	protein_coding	hedgehog interacting protein-like 2
chr1	183766766	183768998	+	183745931	183768998	A5SS	0.5	50	50	ENSMUST00000139839.2	ENSMUSG00000039384.9	Dusp10	chr1	protein_coding	dual specificity phosphatase 10
chr1	184090762	184110990	+	184090762;184109625	184109475;184110990	ES	0.5	50	50	ENSMUST00000195070.6	ENSMUSG00000102682.6	Gm37223	chr1	lncRNA	predicted gene, 37223
chr1	184119694	184126285	+	184119694	184122625	3pMXE	0.5	50	50	ENSMUST00000195070.6	ENSMUSG00000102682.6	Gm37223	chr1	lncRNA	predicted gene, 37223
chr1	184090762	184105495	+	184090762	184109475	A3SS	0.25	50	50	ENSMUST00000195070.6	ENSMUSG00000102682.6	Gm37223	chr1	lncRNA	predicted gene, 37223
chr1	184115037	184119594	+	184111106	184119594	A5SS	0.33	50	50	ENSMUST00000195070.6	ENSMUSG00000102682.6	Gm37223	chr1	lncRNA	predicted gene, 37223
chr1	184090762	184119594	+	184090762;184111106	184110990;184119594	ES	0.33	50	50	ENSMUST00000193894.6	ENSMUSG00000102682.6	Gm37223	chr1	lncRNA	predicted gene, 37223
chr1	184090762	184105495	+	184090762	184110990	A3SS	0.25	50	50	ENSMUST00000193894.6	ENSMUSG00000102682.6	Gm37223	chr1	lncRNA	predicted gene, 37223
chr1	184090762	184105495	+	184090762	184119594	A3SS	0.25	50	50	ENSMUST00000194485.6	ENSMUSG00000102682.6	Gm37223	chr1	lncRNA	predicted gene, 37223
chr1	184090762	184109475	+	184090762	184119594	A3SS	0.25	50	50	ENSMUST00000194485.6	ENSMUSG00000102682.6	Gm37223	chr1	lncRNA	predicted gene, 37223
chr1	184115037	184119594	+	184090762	184119594	A5SS	0.33	50	50	ENSMUST00000194485.6	ENSMUSG00000102682.6	Gm37223	chr1	lncRNA	predicted gene, 37223
chr1	184090762;184105578	184105495;184126285	+	184090762;184119694	184119594;184126285	MXE	0.5	100	100	ENSMUST00000191890.6	ENSMUSG00000102682.6	Gm37223	chr1	lncRNA	predicted gene, 37223
chr1	184343431	184347668	-	184342773	184347668	A3SS	0.5	50	50	ENSMUST00000193667.6	ENSMUSG00000103308.6	Gm37800	chr1	lncRNA	predicted gene, 37800
chr1	184347889	184350044	-	184347889	184361637	A5SS	0.5	50	50	ENSMUST00000193667.6	ENSMUSG00000103308.6	Gm37800	chr1	lncRNA	predicted gene, 37800
chr1	184460015	184463756	-	184463067	184463756	A3SS&ES	0.5	50	50	ENSMUST00000048572.7	ENSMUSG00000039377.8	Hlx	chr1	protein_coding	H2.0-like homeobox
chr1	184534239	184535415	-	184534239	184536125	A5SS	0.5	50	50	ENSMUST00000048462.13	ENSMUSG00000026621.14	Mtarc1	chr1	protein_coding	mitochondrial amidoxime reducing component 1
chr1	184539385	184540977	-	184539385	184543043	A5SS	0.5	50	50	ENSMUST00000048462.13	ENSMUSG00000026621.14	Mtarc1	chr1	protein_coding	mitochondrial amidoxime reducing component 1
chr1	184554603	184564773	-	184554603;184554747	184554686;184564773	ES	0.33	50	50	ENSMUST00000068725.10	ENSMUSG00000073481.10	Mtarc2	chr1	protein_coding	mitochondrial amidoxime reducing component 2
chr1	184566225	184577743	-	184566225;184573624	184573451;184577743	ES	0.5	50	50	ENSMUST00000068725.10	ENSMUSG00000073481.10	Mtarc2	chr1	protein_coding	mitochondrial amidoxime reducing component 2
chr1	184573624	184578540	-	184573624	184577743	5pMXE	0.5	50	50	ENSMUST00000068725.10	ENSMUSG00000073481.10	Mtarc2	chr1	protein_coding	mitochondrial amidoxime reducing component 2
chr1	184560122	184564773	-	184554747	184564773	A3SS	0.33	50	50	ENSMUST00000068725.10	ENSMUSG00000073481.10	Mtarc2	chr1	protein_coding	mitochondrial amidoxime reducing component 2
chr1	184554747	184559305	-	184554747	184564773	A5SS	0.25	50	50	ENSMUST00000068725.10	ENSMUSG00000073481.10	Mtarc2	chr1	protein_coding	mitochondrial amidoxime reducing component 2
chr1	184554747	184559385	-	184554747	184564773	A5SS	0.25	50	50	ENSMUST00000068725.10	ENSMUSG00000073481.10	Mtarc2	chr1	protein_coding	mitochondrial amidoxime reducing component 2
chr1	184554747	184559595	-	184554747	184564773	A5SS	0.25	50	50	ENSMUST00000068725.10	ENSMUSG00000073481.10	Mtarc2	chr1	protein_coding	mitochondrial amidoxime reducing component 2
chr1	184554747	184559305	-	184554747	184559595	A5SS	0.25	50	50	ENSMUST00000161359.8	ENSMUSG00000073481.10	Mtarc2	chr1	protein_coding	mitochondrial amidoxime reducing component 2
chr1	184554747	184559385	-	184554747	184559595	A5SS	0.25	50	50	ENSMUST00000161359.8	ENSMUSG00000073481.10	Mtarc2	chr1	protein_coding	mitochondrial amidoxime reducing component 2
chr1	184554603	184564773	-	184554603	184554686	5pMXE	0.5	50	50	ENSMUST00000161341.8	ENSMUSG00000073481.10	Mtarc2	chr1	protein_coding	mitochondrial amidoxime reducing component 2
chr1	184554747	184559385	-	184554747	184559305	A5SS	0.25	50	50	ENSMUST00000162261.8	ENSMUSG00000073481.10	Mtarc2	chr1	protein_coding	mitochondrial amidoxime reducing component 2
chr1	184560122	184564773	-	184554603	184564773	A3SS	0.33	50	50	ENSMUST00000159293.8	ENSMUSG00000073481.10	Mtarc2	chr1	protein_coding	mitochondrial amidoxime reducing component 2
chr1	184566225	184577743	-	184566225	184573451	A5SS&ES	0.5	50	50	ENSMUST00000161821.4	ENSMUSG00000073481.10	Mtarc2	chr1	protein_coding	mitochondrial amidoxime reducing component 2
chr1	184677197;184717177	184717044;184731619	-	184677197	184731619	cassetteExon	0.5	100	100	ENSMUST00000027929.10	ENSMUSG00000026620.12	Mark1	chr1	protein_coding	MAP/microtubule affinity regulating kinase 1
chr1	184999271	184999370	+	184999211	184999370	A5SS	0.5	50	50	ENSMUST00000194740.6	ENSMUSG00000039318.13	Rab3gap2	chr1	protein_coding	RAB3 GTPase activating protein subunit 2
chr1	185044724	185048091	-	185035598	185048091	A3SS	0.5	50	50	ENSMUST00000027921.11	ENSMUSG00000026618.12	Iars2	chr1	protein_coding	isoleucine-tRNA synthetase 2, mitochondrial
chr1	185064460	185073420	+	185064460;185070429	185070303;185073420	ES	0.5	50	50	ENSMUST00000027916.13	ENSMUSG00000026617.17	Bpnt1	chr1	protein_coding	3'(2'), 5'-bisphosphate nucleotidase 1
chr1	185081032;185082078	185082034;185084379	+	185081032	185084379	cassetteExon	0.5	100	100	ENSMUST00000027916.13	ENSMUSG00000026617.17	Bpnt1	chr1	protein_coding	3'(2'), 5'-bisphosphate nucleotidase 1
chr1	185064518	185070303	+	185064460	185070303	A5SS	0.5	50	50	ENSMUST00000027916.13	ENSMUSG00000026617.17	Bpnt1	chr1	protein_coding	3'(2'), 5'-bisphosphate nucleotidase 1
chr1	185077624	185078872	+	185077619	185078872	A5SS	0.5	50	50	ENSMUST00000027916.13	ENSMUSG00000026617.17	Bpnt1	chr1	protein_coding	3'(2'), 5'-bisphosphate nucleotidase 1
chr1	185064460	185073420	+	185070429	185073420	A5SS&ES	0.5	50	50	ENSMUST00000151769.2	ENSMUSG00000026617.17	Bpnt1	chr1	protein_coding	3'(2'), 5'-bisphosphate nucleotidase 1
chr1	185103242	185106315	+	185103242;185105254	185105115;185106315	ES	0.5	50	50	ENSMUST00000192284.6	ENSMUSG00000026615.15	Eprs	chr1	protein_coding	glutamyl-prolyl-tRNA synthetase
chr1	185106409	185111742	+	185106409;185111098	185110972;185111742	ES	0.5	50	50	ENSMUST00000192284.6	ENSMUSG00000026615.15	Eprs	chr1	protein_coding	glutamyl-prolyl-tRNA synthetase
chr1	185106409	185106817	+	185106409	185110972	A3SS	0.33	50	50	ENSMUST00000192284.6	ENSMUSG00000026615.15	Eprs	chr1	protein_coding	glutamyl-prolyl-tRNA synthetase
chr1	185106409	185111742	+	185106409	185106817	3pMXE	0.33	50	50	ENSMUST00000193788.6	ENSMUSG00000026615.15	Eprs	chr1	protein_coding	glutamyl-prolyl-tRNA synthetase
chr1	185103242	185106315	+	185103242	185105115	3pMXE	0.5	50	50	ENSMUST00000194157.6	ENSMUSG00000026615.15	Eprs	chr1	protein_coding	glutamyl-prolyl-tRNA synthetase
chr1	185106409	185111742	+	185106409	185110972	3pMXE	0.33	50	50	ENSMUST00000195824.2	ENSMUSG00000026615.15	Eprs	chr1	protein_coding	glutamyl-prolyl-tRNA synthetase
chr1	185187876	185188511	+	185187876	185188549	A3SS	0.5	50	50	ENSMUST00000061093.7	ENSMUSG00000026614.8	Slc30a10	chr1	protein_coding	solute carrier family 30, member 10
chr1	185821756	185846461	-	185821756;185832559	185832390;185846461	ES	0.5	50	50	ENSMUST00000045388.8	ENSMUSG00000039246.9	Lyplal1	chr1	protein_coding	lysophospholipase-like 1
chr1	186251524	186290565	-	186245090	186290565	A3SS	0.5	50	50	ENSMUST00000193084.2	ENSMUSG00000103690.2	A730004F24Rik	chr1	lncRNA	RIKEN cDNA A730004F24 gene
chr1	186382095;186423001	186422918;186436626	-	186382095	186436626	cassetteExon	0.5	100	100	ENSMUST00000045288.14	ENSMUSG00000039239.15	Tgfb2	chr1	protein_coding	transforming growth factor, beta 2
chr1	186362869	186364655	-	186362984	186364655	A3SS	0.5	50	50	ENSMUST00000045288.14	ENSMUSG00000039239.15	Tgfb2	chr1	protein_coding	transforming growth factor, beta 2
chr1	186382095	186400202	-	186382095	186436626	A5SS	0.33	50	50	ENSMUST00000045288.14	ENSMUSG00000039239.15	Tgfb2	chr1	protein_coding	transforming growth factor, beta 2
chr1	186382095	186400202	-	186382095	186422918	A5SS	0.33	50	50	ENSMUST00000195201.2	ENSMUSG00000039239.15	Tgfb2	chr1	protein_coding	transforming growth factor, beta 2
chr1	186423001	186436249	-	186423001	186436626	A5SS	0.5	50	50	ENSMUST00000195201.2	ENSMUSG00000039239.15	Tgfb2	chr1	protein_coding	transforming growth factor, beta 2
chr1	186659274	186661193	+	186659472	186661193	A5SS	0.5	50	50	ENSMUST00000194513.2	ENSMUSG00000103503.2	1700023G09Rik	chr1	lncRNA	RIKEN cDNA 1700023G09 gene
chr1	186867761	186872570	-	186849666	186872570	A3SS	0.33	50	50	ENSMUST00000183819.8	ENSMUSG00000026611.18	Spata17	chr1	protein_coding	spermatogenesis associated 17
chr1	186867831	186872570	-	186849666	186872570	A3SS	0.33	50	50	ENSMUST00000183819.8	ENSMUSG00000026611.18	Spata17	chr1	protein_coding	spermatogenesis associated 17
chr1	186921762	186925136	-	186915467	186925136	A3SS	0.5	50	50	ENSMUST00000183819.8	ENSMUSG00000026611.18	Spata17	chr1	protein_coding	spermatogenesis associated 17
chr1	186872693	186875024	-	186872693	186906572	A5SS	0.33	50	50	ENSMUST00000183819.8	ENSMUSG00000026611.18	Spata17	chr1	protein_coding	spermatogenesis associated 17
chr1	186872693	186947367	-	186872693	186875024	5pMXE	0.33	50	50	ENSMUST00000183996.8	ENSMUSG00000026611.18	Spata17	chr1	protein_coding	spermatogenesis associated 17
chr1	186867831	186875024	-	186872693	186875024	A3SS&ES	0.5	50	50	ENSMUST00000183996.8	ENSMUSG00000026611.18	Spata17	chr1	protein_coding	spermatogenesis associated 17
chr1	186926212	186947367	-	186872693	186947367	A3SS	0.5	50	50	ENSMUST00000183931.8	ENSMUSG00000026611.18	Spata17	chr1	protein_coding	spermatogenesis associated 17
chr1	186872693	186906572	-	186872693	186947367	A5SS	0.33	50	50	ENSMUST00000183931.8	ENSMUSG00000026611.18	Spata17	chr1	protein_coding	spermatogenesis associated 17
chr1	186867831	186872570	-	186867761	186872570	A3SS	0.33	50	50	ENSMUST00000184543.2	ENSMUSG00000026611.18	Spata17	chr1	protein_coding	spermatogenesis associated 17
chr1	186867831	186875024	-	186867831	186872570	A5SS&ES	0.5	50	50	ENSMUST00000110945.4	ENSMUSG00000026611.18	Spata17	chr1	protein_coding	spermatogenesis associated 17
chr1	186867831;186872693	186872570;186875024	-	186867831	186875024	cassetteExon	0.5	100	100	ENSMUST00000183656.2	ENSMUSG00000026611.18	Spata17	chr1	protein_coding	spermatogenesis associated 17
chr1	186966023	187036527	+	186966023	186966829	3pMXE	0.33	50	50	ENSMUST00000097443.10	ENSMUSG00000039210.17	Gpatch2	chr1	protein_coding	G patch domain containing 2
chr1	186958416;186961857	186961796;186962981	+	186958416	186962981	cassetteExon	0.5	100	100	ENSMUST00000097443.10	ENSMUSG00000039210.17	Gpatch2	chr1	protein_coding	G patch domain containing 2
chr1	186963042;186965032	186964907;186965328	+	186963042	186965328	cassetteExon	0.5	100	100	ENSMUST00000097443.10	ENSMUSG00000039210.17	Gpatch2	chr1	protein_coding	G patch domain containing 2
chr1	186966023	186966151	+	186966023	186966829	A3SS	0.33	50	50	ENSMUST00000097443.10	ENSMUSG00000039210.17	Gpatch2	chr1	protein_coding	G patch domain containing 2
chr1	186948103	186957700	+	186947873	186957700	A5SS	0.5	50	50	ENSMUST00000097443.10	ENSMUSG00000039210.17	Gpatch2	chr1	protein_coding	G patch domain containing 2
chr1	187036594	187048721	+	187036594;187047675	187047556;187048721	ES	0.5	50	50	ENSMUST00000160481.8	ENSMUSG00000039210.17	Gpatch2	chr1	protein_coding	G patch domain containing 2
chr1	186966023	186966151	+	186966023	187036527	A3SS	0.33	50	50	ENSMUST00000160481.8	ENSMUSG00000039210.17	Gpatch2	chr1	protein_coding	G patch domain containing 2
chr1	187036594	187047556	+	187036594	187073684	A3SS	0.33	50	50	ENSMUST00000110943.9	ENSMUSG00000039210.17	Gpatch2	chr1	protein_coding	G patch domain containing 2
chr1	187036594	187048721	+	187036594	187073684	A3SS	0.33	50	50	ENSMUST00000110943.9	ENSMUSG00000039210.17	Gpatch2	chr1	protein_coding	G patch domain containing 2
chr1	187054551	187073684	+	187036594	187073684	A5SS	0.5	50	50	ENSMUST00000110943.9	ENSMUSG00000039210.17	Gpatch2	chr1	protein_coding	G patch domain containing 2
chr1	187341981	187525522	+	187341402	187525522	A5SS	0.5	50	50	ENSMUST00000127489.8	ENSMUSG00000026610.14	Esrrg	chr1	protein_coding	estrogen-related receptor gamma
chr1	187730249	187775531	+	187525609	187775531	A5SS	0.33	50	50	ENSMUST00000127489.8	ENSMUSG00000026610.14	Esrrg	chr1	protein_coding	estrogen-related receptor gamma
chr1	187754680	187775531	+	187525609	187775531	A5SS	0.33	50	50	ENSMUST00000127489.8	ENSMUSG00000026610.14	Esrrg	chr1	protein_coding	estrogen-related receptor gamma
chr1	187730249;187754680	187754559;187775531	+	187730249	187775531	cassetteExon	0.5	100	100	ENSMUST00000027906.13	ENSMUSG00000026610.14	Esrrg	chr1	protein_coding	estrogen-related receptor gamma
chr1	187994260	187995035	+	187994260	187999168	A3SS	0.5	50	50	ENSMUST00000142189.8	ENSMUSG00000026609.16	Ush2a	chr1	protein_coding	usherin
chr1	187995706	187999168	+	187994260	187999168	A5SS	0.5	50	50	ENSMUST00000142189.8	ENSMUSG00000026609.16	Ush2a	chr1	protein_coding	usherin
chr1	187994260	187999168	+	187994260;187995706	187995035;187999168	ES	0.5	50	50	ENSMUST00000124358.2	ENSMUSG00000026609.16	Ush2a	chr1	protein_coding	usherin
chr1	188689709;188694236	188694165;188694915	+	188689709	188694915	cassetteExon	0.5	100	100	ENSMUST00000060479.14	ENSMUSG00000026609.16	Ush2a	chr1	protein_coding	usherin
chr1	188706395	188706484	-	188706401	188706484	A3SS	0.5	50	50	ENSMUST00000193143.6	ENSMUSG00000026608.14	Kctd3	chr1	protein_coding	potassium channel tetramerisation domain containing 3
chr1	188706668	188708808	-	188706668	188708568	A5SS	0.5	50	50	ENSMUST00000193143.6	ENSMUSG00000026608.14	Kctd3	chr1	protein_coding	potassium channel tetramerisation domain containing 3
chr1	188975223	188990935	-	188975223;188988951	188988765;188990935	ES	0.5	50	50	ENSMUST00000079451.13	ENSMUSG00000037624.16	Kcnk2	chr1	protein_coding	potassium channel, subfamily K, member 2
chr1	188991095	189071982	-	188991095;189027908	189027791;189071982	ES	0.5	50	50	ENSMUST00000079451.13	ENSMUSG00000037624.16	Kcnk2	chr1	protein_coding	potassium channel, subfamily K, member 2
chr1	189072292	189078933	-	189072292	189076188	5pMXE	0.2	50	50	ENSMUST00000079451.13	ENSMUSG00000037624.16	Kcnk2	chr1	protein_coding	potassium channel, subfamily K, member 2
chr1	189072292	189134310	-	189072292	189076188	5pMXE	0.2	50	50	ENSMUST00000079451.13	ENSMUSG00000037624.16	Kcnk2	chr1	protein_coding	potassium channel, subfamily K, member 2
chr1	188942304	188947164	-	188942304	188975084	A5SS	0.5	50	50	ENSMUST00000079451.13	ENSMUSG00000037624.16	Kcnk2	chr1	protein_coding	potassium channel, subfamily K, member 2
chr1	188975223	188975434	-	188975223	188988765	A5SS	0.33	50	50	ENSMUST00000079451.13	ENSMUSG00000037624.16	Kcnk2	chr1	protein_coding	potassium channel, subfamily K, member 2
chr1	189072292	189075240	-	189072292	189076188	A5SS	0.2	50	50	ENSMUST00000079451.13	ENSMUSG00000037624.16	Kcnk2	chr1	protein_coding	potassium channel, subfamily K, member 2
chr1	189072292	189075498	-	189072292	189076188	A5SS	0.2	50	50	ENSMUST00000079451.13	ENSMUSG00000037624.16	Kcnk2	chr1	protein_coding	potassium channel, subfamily K, member 2
chr1	189072292	189075240	-	189072292	189075498	A5SS	0.5	50	50	ENSMUST00000110920.7	ENSMUSG00000037624.16	Kcnk2	chr1	protein_coding	potassium channel, subfamily K, member 2
chr1	189072292	189075240	-	189072292	189134310	A5SS	0.2	50	50	ENSMUST00000180044.8	ENSMUSG00000037624.16	Kcnk2	chr1	protein_coding	potassium channel, subfamily K, member 2
chr1	189072292	189075498	-	189072292	189134310	A5SS	0.2	50	50	ENSMUST00000180044.8	ENSMUSG00000037624.16	Kcnk2	chr1	protein_coding	potassium channel, subfamily K, member 2
chr1	189072292	189078933	-	189072292	189134310	A5SS	0.2	50	50	ENSMUST00000180044.8	ENSMUSG00000037624.16	Kcnk2	chr1	protein_coding	potassium channel, subfamily K, member 2
chr1	188975223	188975434	-	188975223	188990935	A5SS	0.33	50	50	ENSMUST00000194172.6	ENSMUSG00000037624.16	Kcnk2	chr1	protein_coding	potassium channel, subfamily K, member 2
chr1	189072292	189078933	-	189072292	189075240	5pMXE	0.2	50	50	ENSMUST00000193319.6	ENSMUSG00000037624.16	Kcnk2	chr1	protein_coding	potassium channel, subfamily K, member 2
chr1	189072292	189078933	-	189072292	189075498	5pMXE	0.2	50	50	ENSMUST00000192723.2	ENSMUSG00000037624.16	Kcnk2	chr1	protein_coding	potassium channel, subfamily K, member 2
chr1	189379177	189380982	-	189379177	189380808	A5SS	0.5	50	50	ENSMUST00000171929.8	ENSMUSG00000026605.15	Cenpf	chr1	protein_coding	centromere protein F
chr1	189411338	189412469	-	189411338	189412418	A5SS	0.5	50	50	ENSMUST00000171929.8	ENSMUSG00000026605.15	Cenpf	chr1	protein_coding	centromere protein F
chr1	189416161	189416730	-	189416161	189417142	A5SS	0.5	50	50	ENSMUST00000171929.8	ENSMUSG00000026605.15	Cenpf	chr1	protein_coding	centromere protein F
chr1	189582684	189587122	+	189583704	189587122	A5SS	0.5	50	50	ENSMUST00000097442.9	ENSMUSG00000026604.18	Ptpn14	chr1	protein_coding	protein tyrosine phosphatase, non-receptor type 14
chr1	189595210	189595401	+	189592783	189595401	A5SS	0.5	50	50	ENSMUST00000097442.9	ENSMUSG00000026604.18	Ptpn14	chr1	protein_coding	protein tyrosine phosphatase, non-receptor type 14
chr1	189631093	189632015	-	189629680	189632015	A3SS	0.5	50	50	ENSMUST00000027897.8	ENSMUSG00000026603.14	Smyd2	chr1	protein_coding	SET and MYND domain containing 2
chr1	189629680	189630550	-	189629680	189632015	A5SS	0.5	50	50	ENSMUST00000027897.8	ENSMUSG00000026603.14	Smyd2	chr1	protein_coding	SET and MYND domain containing 2
chr1	189629680	189632015	-	189629680;189631093	189630550;189632015	ES	0.5	50	50	ENSMUST00000144452.2	ENSMUSG00000026603.14	Smyd2	chr1	protein_coding	SET and MYND domain containing 2
chr1	189894510	189901360	-	189894510	189902465	A5SS	0.33	50	50	ENSMUST00000175916.8	ENSMUSG00000010175.14	Prox1	chr1	protein_coding	prospero homeobox 1
chr1	189894510	189902225	-	189894510	189902465	A5SS	0.33	50	50	ENSMUST00000175916.8	ENSMUSG00000010175.14	Prox1	chr1	protein_coding	prospero homeobox 1
chr1	189894510	189902225	-	189894510	189901360	5pMXE	0.33	50	50	ENSMUST00000010319.14	ENSMUSG00000010175.14	Prox1	chr1	protein_coding	prospero homeobox 1
chr1	190631768	190643753	-	190631768;190637315	190637280;190643753	ES	0.5	50	50	ENSMUST00000159624.8	ENSMUSG00000089872.11	Rps6kc1	chr1	protein_coding	ribosomal protein S6 kinase polypeptide 1
chr1	190576799	190603789	-	190482404	190603789	A3SS	0.5	50	50	ENSMUST00000159624.8	ENSMUSG00000089872.11	Rps6kc1	chr1	protein_coding	ribosomal protein S6 kinase polypeptide 1
chr1	190631768	190631862	-	190631768	190637280	A5SS	0.25	50	50	ENSMUST00000159624.8	ENSMUSG00000089872.11	Rps6kc1	chr1	protein_coding	ribosomal protein S6 kinase polypeptide 1
chr1	190631768	190637140	-	190631768	190637280	A5SS	0.25	50	50	ENSMUST00000159624.8	ENSMUSG00000089872.11	Rps6kc1	chr1	protein_coding	ribosomal protein S6 kinase polypeptide 1
chr1	190542318	190566203	-	190532778	190566203	A3SS	0.5	50	50	ENSMUST00000160889.8	ENSMUSG00000089872.11	Rps6kc1	chr1	protein_coding	ribosomal protein S6 kinase polypeptide 1
chr1	190532778	190541080	-	190532778	190566203	A5SS	0.5	50	50	ENSMUST00000160889.8	ENSMUSG00000089872.11	Rps6kc1	chr1	protein_coding	ribosomal protein S6 kinase polypeptide 1
chr1	190542318	190576684	-	190542318;190566295	190566203;190576684	ES	0.5	50	50	ENSMUST00000159367.8	ENSMUSG00000089872.11	Rps6kc1	chr1	protein_coding	ribosomal protein S6 kinase polypeptide 1
chr1	190631768	190643753	-	190631768;190637315	190637140;190643753	ES	0.5	50	50	ENSMUST00000159367.8	ENSMUSG00000089872.11	Rps6kc1	chr1	protein_coding	ribosomal protein S6 kinase polypeptide 1
chr1	190631768	190631862	-	190631768	190637140	A5SS	0.25	50	50	ENSMUST00000159367.8	ENSMUSG00000089872.11	Rps6kc1	chr1	protein_coding	ribosomal protein S6 kinase polypeptide 1
chr1	190532778;190566295	190566203;190576684	-	190532778;190542318	190541080;190576684	MXE	0.5	100	100	ENSMUST00000159823.8	ENSMUSG00000089872.11	Rps6kc1	chr1	protein_coding	ribosomal protein S6 kinase polypeptide 1
chr1	190620961	190631648	-	190604148	190631648	A3SS	0.5	50	50	ENSMUST00000162500.8	ENSMUSG00000089872.11	Rps6kc1	chr1	protein_coding	ribosomal protein S6 kinase polypeptide 1
chr1	190604148	190617531	-	190604148	190631648	A5SS	0.5	50	50	ENSMUST00000162500.8	ENSMUSG00000089872.11	Rps6kc1	chr1	protein_coding	ribosomal protein S6 kinase polypeptide 1
chr1	190631768	190631862	-	190631768	190643753	A5SS	0.25	50	50	ENSMUST00000162500.8	ENSMUSG00000089872.11	Rps6kc1	chr1	protein_coding	ribosomal protein S6 kinase polypeptide 1
chr1	190673492	190675027	+	190673492;190674444	190674318;190675027	ES	0.5	50	50	ENSMUST00000027947.13	ENSMUSG00000026634.17	Angel2	chr1	protein_coding	angel homolog 2
chr1	190665389;190667191	190666943;190669641	+	190665389	190669641	cassetteExon	0.5	100	100	ENSMUST00000027947.13	ENSMUSG00000026634.17	Angel2	chr1	protein_coding	angel homolog 2
chr1	190660914	190665064	+	190658931	190665064	A5SS	0.2	50	50	ENSMUST00000027947.13	ENSMUSG00000026634.17	Angel2	chr1	protein_coding	angel homolog 2
chr1	190660955	190665064	+	190658931	190665064	A5SS	0.2	50	50	ENSMUST00000027947.13	ENSMUSG00000026634.17	Angel2	chr1	protein_coding	angel homolog 2
chr1	190660955	190669641	+	190665389	190669641	A5SS&ES	0.25	50	50	ENSMUST00000027947.13	ENSMUSG00000026634.17	Angel2	chr1	protein_coding	angel homolog 2
chr1	190661101	190665064	+	190658931	190665064	A5SS	0.2	50	50	ENSMUST00000027947.13	ENSMUSG00000026634.17	Angel2	chr1	protein_coding	angel homolog 2
chr1	190661101	190669641	+	190665389	190669641	A5SS&ES	0.25	50	50	ENSMUST00000027947.13	ENSMUSG00000026634.17	Angel2	chr1	protein_coding	angel homolog 2
chr1	190661296	190665064	+	190658931	190665064	A5SS	0.2	50	50	ENSMUST00000027947.13	ENSMUSG00000026634.17	Angel2	chr1	protein_coding	angel homolog 2
chr1	190673655	190674318	+	190673492	190674318	A5SS	0.5	50	50	ENSMUST00000027947.13	ENSMUSG00000026634.17	Angel2	chr1	protein_coding	angel homolog 2
chr1	190660955	190669641	+	190660955;190665389	190665064;190669641	ES	0.25	50	50	ENSMUST00000137608.8	ENSMUSG00000026634.17	Angel2	chr1	protein_coding	angel homolog 2
chr1	190660914	190665064	+	190660955	190665064	A5SS	0.2	50	50	ENSMUST00000137608.8	ENSMUSG00000026634.17	Angel2	chr1	protein_coding	angel homolog 2
chr1	190661101	190665064	+	190660955	190665064	A5SS	0.2	50	50	ENSMUST00000137608.8	ENSMUSG00000026634.17	Angel2	chr1	protein_coding	angel homolog 2
chr1	190661296	190665064	+	190660955	190665064	A5SS	0.2	50	50	ENSMUST00000137608.8	ENSMUSG00000026634.17	Angel2	chr1	protein_coding	angel homolog 2
chr1	190661101	190669641	+	190660955	190669641	A5SS	0.25	50	50	ENSMUST00000123384.8	ENSMUSG00000026634.17	Angel2	chr1	protein_coding	angel homolog 2
chr1	190667191	190669641	+	190660955	190669641	A5SS	0.25	50	50	ENSMUST00000123384.8	ENSMUSG00000026634.17	Angel2	chr1	protein_coding	angel homolog 2
chr1	190661101	190665064	+	190660914	190665064	A5SS	0.2	50	50	ENSMUST00000110899.7	ENSMUSG00000026634.17	Angel2	chr1	protein_coding	angel homolog 2
chr1	190661296	190665064	+	190660914	190665064	A5SS	0.2	50	50	ENSMUST00000110899.7	ENSMUSG00000026634.17	Angel2	chr1	protein_coding	angel homolog 2
chr1	190661101	190669641	+	190661101;190665389	190665064;190669641	ES	0.33	50	50	ENSMUST00000135364.7	ENSMUSG00000026634.17	Angel2	chr1	protein_coding	angel homolog 2
chr1	190661296	190665064	+	190661101	190665064	A5SS	0.2	50	50	ENSMUST00000135364.7	ENSMUSG00000026634.17	Angel2	chr1	protein_coding	angel homolog 2
chr1	190667191	190669641	+	190661101	190669641	A5SS	0.25	50	50	ENSMUST00000144693.2	ENSMUSG00000026634.17	Angel2	chr1	protein_coding	angel homolog 2
chr1	190673492	190675027	+	190674444	190675027	A5SS&ES	0.5	50	50	ENSMUST00000144693.2	ENSMUSG00000026634.17	Angel2	chr1	protein_coding	angel homolog 2
chr1	190705218	190710378	-	190702689	190710378	A3SS	0.5	50	50	ENSMUST00000166139.7	ENSMUSG00000037568.13	Vash2	chr1	protein_coding	vasohibin 2
chr1	190710784	190710903	-	190710784	190711334	A5SS	0.5	50	50	ENSMUST00000166139.7	ENSMUSG00000037568.13	Vash2	chr1	protein_coding	vasohibin 2
chr1	190747695	190757574	-	190747695;190753453	190753273;190757574	ES	0.5	50	50	ENSMUST00000085635.6	ENSMUSG00000066595.10	Flvcr1	chr1	protein_coding	feline leukemia virus subgroup C cellular receptor 1
chr1	190769071	190771742	+	190768909	190771742	A5SS	0.5	50	50	ENSMUST00000192151.6	ENSMUSG00000057072.12	Spata45	chr1	protein_coding	spermatogenesis associated 45
chr1	190781559	190787053	-	190781559;190785169	190785057;190787053	ES	0.5	50	50	ENSMUST00000110893.10	ENSMUSG00000026632.18	Tatdn3	chr1	protein_coding	TatD DNase domain containing 3
chr1	190778533	190781479	-	190778517	190781479	A3SS	0.5	50	50	ENSMUST00000110893.10	ENSMUSG00000026632.18	Tatdn3	chr1	protein_coding	TatD DNase domain containing 3
chr1	190781556	190785057	-	190781559	190785057	A3SS	0.5	50	50	ENSMUST00000110893.10	ENSMUSG00000026632.18	Tatdn3	chr1	protein_coding	TatD DNase domain containing 3
chr1	190790221	190791024	-	190788622	190791024	A3SS	0.5	50	50	ENSMUST00000110893.10	ENSMUSG00000026632.18	Tatdn3	chr1	protein_coding	TatD DNase domain containing 3
chr1	190781559	190787053	-	190785169	190787053	A3SS&ES	0.5	50	50	ENSMUST00000027945.6	ENSMUSG00000026632.18	Tatdn3	chr1	protein_coding	TatD DNase domain containing 3
chr1	190803429	190808814	+	190803429	190807322	3pMXE	0.33	50	50	ENSMUST00000076952.12	ENSMUSG00000062510.13	Nsl1	chr1	protein_coding	NSL1, MIS12 kinetochore complex component
chr1	190803429	190812686	+	190803429	190807322	3pMXE	0.33	50	50	ENSMUST00000076952.12	ENSMUSG00000062510.13	Nsl1	chr1	protein_coding	NSL1, MIS12 kinetochore complex component
chr1	190803429	190812686	+	190803429	190808814	3pMXE	0.33	50	50	ENSMUST00000139340.8	ENSMUSG00000062510.13	Nsl1	chr1	protein_coding	NSL1, MIS12 kinetochore complex component
chr1	190830434;190831604	190831453;190832925	+	190830434	190832925	cassetteExon	0.5	100	100	ENSMUST00000194833.6	ENSMUSG00000026630.10	Batf3	chr1	protein_coding	basic leucine zipper transcription factor, ATF-like 3
chr1	190830724	190832925	+	190830434	190832925	A5SS	0.33	50	50	ENSMUST00000194833.6	ENSMUSG00000026630.10	Batf3	chr1	protein_coding	basic leucine zipper transcription factor, ATF-like 3
chr1	190830724	190831453	+	190830434	190831453	A5SS	0.5	50	50	ENSMUST00000193771.6	ENSMUSG00000026630.10	Batf3	chr1	protein_coding	basic leucine zipper transcription factor, ATF-like 3
chr1	190830724	190832925	+	190831604	190832925	A5SS&ES	0.33	50	50	ENSMUST00000193771.6	ENSMUSG00000026630.10	Batf3	chr1	protein_coding	basic leucine zipper transcription factor, ATF-like 3
chr1	190830724;190831604	190831453;190832925	+	190830724	190832925	cassetteExon	0.5	100	100	ENSMUST00000027943.6	ENSMUSG00000026630.10	Batf3	chr1	protein_coding	basic leucine zipper transcription factor, ATF-like 3
chr1	190909671	190950067	-	190909671	190915290	5pMXE	0.5	50	50	ENSMUST00000027941.14	ENSMUSG00000026628.14	Atf3	chr1	protein_coding	activating transcription factor 3
chr1	191104863	191131150	-	191104863	191128433	5pMXE	0.33	50	50	ENSMUST00000067976.9	ENSMUSG00000026626.12	Ppp2r5a	chr1	protein_coding	protein phosphatase 2, regulatory subunit B', alpha
chr1	191091276	191094446	-	191091252	191094446	A3SS	0.5	50	50	ENSMUST00000067976.9	ENSMUSG00000026626.12	Ppp2r5a	chr1	protein_coding	protein phosphatase 2, regulatory subunit B', alpha
chr1	191120619	191128433	-	191104863	191128433	A3SS	0.5	50	50	ENSMUST00000067976.9	ENSMUSG00000026626.12	Ppp2r5a	chr1	protein_coding	protein phosphatase 2, regulatory subunit B', alpha
chr1	191104863	191117491	-	191104863	191128433	A5SS	0.33	50	50	ENSMUST00000067976.9	ENSMUSG00000026626.12	Ppp2r5a	chr1	protein_coding	protein phosphatase 2, regulatory subunit B', alpha
chr1	191104863	191131150	-	191104863	191117491	5pMXE	0.33	50	50	ENSMUST00000195605.6	ENSMUSG00000026626.12	Ppp2r5a	chr1	protein_coding	protein phosphatase 2, regulatory subunit B', alpha
chr1	191295288	191300403	-	191295288;191297462	191297431;191300403	ES	0.5	50	50	ENSMUST00000195650.6	ENSMUSG00000037474.14	Dtl	chr1	protein_coding	denticleless E3 ubiquitin protein ligase
chr1	191300516	191300607	-	191300523	191300607	A3SS	0.5	50	50	ENSMUST00000195650.6	ENSMUSG00000037474.14	Dtl	chr1	protein_coding	denticleless E3 ubiquitin protein ligase
chr1	191271453	191272084	-	191271453	191272816	A5SS	0.5	50	50	ENSMUST00000195650.6	ENSMUSG00000037474.14	Dtl	chr1	protein_coding	denticleless E3 ubiquitin protein ligase
chr1	191308063	191315291	+	191308063;191314640	191314511;191315291	ES	0.5	50	50	ENSMUST00000045450.7	ENSMUSG00000037461.11	Ints7	chr1	protein_coding	integrator complex subunit 7
chr1	191329121	191336919	+	191329121;191334474	191334357;191336919	ES	0.5	50	50	ENSMUST00000045450.7	ENSMUSG00000037461.11	Ints7	chr1	protein_coding	integrator complex subunit 7
chr1	191308063	191318636	+	191308063;191315437	191315291;191318636	ES	0.5	50	50	ENSMUST00000194877.6	ENSMUSG00000037461.11	Ints7	chr1	protein_coding	integrator complex subunit 7
chr1	191308063	191314511	+	191308063	191318636	A3SS	0.33	50	50	ENSMUST00000194785.2	ENSMUSG00000037461.11	Ints7	chr1	protein_coding	integrator complex subunit 7
chr1	191450317	191451466	+	191450317;191450709	191450541;191451466	ES	0.5	50	50	ENSMUST00000133076.7	ENSMUSG00000026623.17	Lpgat1	chr1	protein_coding	lysophosphatidylglycerol acyltransferase 1
chr1	191450317	191451470	+	191450317	191450541	A3SS&ES	0.33	50	50	ENSMUST00000133076.7	ENSMUSG00000026623.17	Lpgat1	chr1	protein_coding	lysophosphatidylglycerol acyltransferase 1
chr1	191450709	191451470	+	191450709	191451466	A3SS	0.5	50	50	ENSMUST00000133076.7	ENSMUSG00000026623.17	Lpgat1	chr1	protein_coding	lysophosphatidylglycerol acyltransferase 1
chr1	191450317	191451470	+	191450317	191451466	A3SS	0.33	50	50	ENSMUST00000110855.8	ENSMUSG00000026623.17	Lpgat1	chr1	protein_coding	lysophosphatidylglycerol acyltransferase 1
chr1	191450317;191450709	191450541;191451470	+	191450317	191451470	cassetteExon	0.5	100	100	ENSMUST00000138494.2	ENSMUSG00000026623.17	Lpgat1	chr1	protein_coding	lysophosphatidylglycerol acyltransferase 1
chr1	191450317	191451466	+	191450709	191451466	5pMXE	0.5	50	50	ENSMUST00000110856.8	ENSMUSG00000026623.17	Lpgat1	chr1	protein_coding	lysophosphatidylglycerol acyltransferase 1
chr1	191450317	191451470	+	191450709	191451470	5pMXE	0.5	50	50	ENSMUST00000130876.2	ENSMUSG00000026623.17	Lpgat1	chr1	protein_coding	lysophosphatidylglycerol acyltransferase 1
chr1	191561629	191561997	+	191561629	191563249	A3SS	0.5	50	50	ENSMUST00000027931.8	ENSMUSG00000026622.16	Nek2	chr1	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 2
chr1	191622756	191632792	-	191618284	191632792	A3SS	0.33	50	50	ENSMUST00000190327.2	ENSMUSG00000055833.15	1700034H15Rik	chr1	lncRNA	RIKEN cDNA 1700034H15 gene
chr1	191630938	191632792	-	191618284	191632792	A3SS	0.33	50	50	ENSMUST00000190327.2	ENSMUSG00000055833.15	1700034H15Rik	chr1	lncRNA	RIKEN cDNA 1700034H15 gene
chr1	191622756	191632792	-	191622756	191630730	5pMXE	0.5	50	50	ENSMUST00000154116.3	ENSMUSG00000055833.15	1700034H15Rik	chr1	lncRNA	RIKEN cDNA 1700034H15 gene
chr1	191630938	191632792	-	191630938	191631262	5pMXE	0.5	50	50	ENSMUST00000140401.2	ENSMUSG00000055833.15	1700034H15Rik	chr1	lncRNA	RIKEN cDNA 1700034H15 gene
chr1	191633030	191635654	-	191633030	191633674	5pMXE	0.5	50	50	ENSMUST00000145050.8	ENSMUSG00000055833.15	1700034H15Rik	chr1	lncRNA	RIKEN cDNA 1700034H15 gene
chr1	191622756;191630938	191630730;191632792	-	191622756	191632792	cassetteExon	0.5	100	100	ENSMUST00000145050.8	ENSMUSG00000055833.15	1700034H15Rik	chr1	lncRNA	RIKEN cDNA 1700034H15 gene
chr1	191639721	191640963	+	191639725	191640963	A5SS	0.5	50	50	ENSMUST00000044954.7	ENSMUSG00000037434.8	Slc30a1	chr1	protein_coding	solute carrier family 30 (zinc transporter), member 1
chr1	191710758	191715211	+	191709670	191715211	A5SS	0.5	50	50	ENSMUST00000180463.3	ENSMUSG00000049353.18	Rd3	chr1	protein_coding	retinal degeneration 3
chr1	191715452	191717173	+	191715522	191717173	A5SS	0.5	50	50	ENSMUST00000180463.3	ENSMUSG00000049353.18	Rd3	chr1	protein_coding	retinal degeneration 3
chr1	191785455	191800569	-	191785455;191793001	191792944;191800569	ES	0.33	50	50	ENSMUST00000110849.10	ENSMUSG00000037395.17	Rcor3	chr1	protein_coding	REST corepressor 3
chr1	191785455;191786167	191785926;191792944	-	191785455	191792944	cassetteExon	0.5	100	100	ENSMUST00000110849.10	ENSMUSG00000037395.17	Rcor3	chr1	protein_coding	REST corepressor 3
chr1	191785455;191786167	191786052;191792944	-	191785455	191792944	cassetteExon	0.5	100	100	ENSMUST00000110849.10	ENSMUSG00000037395.17	Rcor3	chr1	protein_coding	REST corepressor 3
chr1	191785455;191786167	191785926;191800569	-	191785455;191793001	191792944;191800569	MXE	0.5	100	100	ENSMUST00000110849.10	ENSMUSG00000037395.17	Rcor3	chr1	protein_coding	REST corepressor 3
chr1	191785455;191786167	191786052;191800569	-	191785455;191793001	191792944;191800569	MXE	0.5	100	100	ENSMUST00000110849.10	ENSMUSG00000037395.17	Rcor3	chr1	protein_coding	REST corepressor 3
chr1	191812328;191814237	191814124;191814683	-	191812328	191814683	cassetteExon	0.5	100	100	ENSMUST00000110849.10	ENSMUSG00000037395.17	Rcor3	chr1	protein_coding	REST corepressor 3
chr1	191820996	191821733	-	191814760	191821733	A3SS	0.33	50	50	ENSMUST00000110849.10	ENSMUSG00000037395.17	Rcor3	chr1	protein_coding	REST corepressor 3
chr1	191821123	191821733	-	191814760	191821733	A3SS	0.33	50	50	ENSMUST00000110849.10	ENSMUSG00000037395.17	Rcor3	chr1	protein_coding	REST corepressor 3
chr1	191785455;191786167	191785926;191800569	-	191785455	191800569	cassetteExon	0.5	100	100	ENSMUST00000073279.13	ENSMUSG00000037395.17	Rcor3	chr1	protein_coding	REST corepressor 3
chr1	191785455;191786167	191786052;191800569	-	191785455	191800569	cassetteExon	0.5	100	100	ENSMUST00000073279.13	ENSMUSG00000037395.17	Rcor3	chr1	protein_coding	REST corepressor 3
chr1	191786167;191793001	191792944;191800569	-	191786167	191800569	cassetteExon	0.5	100	100	ENSMUST00000192222.6	ENSMUSG00000037395.17	Rcor3	chr1	protein_coding	REST corepressor 3
chr1	191785455	191786052	-	191785455	191785926	A5SS	0.25	50	50	ENSMUST00000192222.6	ENSMUSG00000037395.17	Rcor3	chr1	protein_coding	REST corepressor 3
chr1	191785455	191800569	-	191786167	191800569	3pMXE	0.33	50	50	ENSMUST00000192491.6	ENSMUSG00000037395.17	Rcor3	chr1	protein_coding	REST corepressor 3
chr1	191785455	191792944	-	191786167	191792944	3pMXE	0.5	50	50	ENSMUST00000192128.6	ENSMUSG00000037395.17	Rcor3	chr1	protein_coding	REST corepressor 3
chr1	191821123	191821733	-	191820996	191821733	A3SS	0.33	50	50	ENSMUST00000194395.6	ENSMUSG00000037395.17	Rcor3	chr1	protein_coding	REST corepressor 3
chr1	192117227;192136010	192135922;192187572	+	192117227	192187572	cassetteExon	0.5	100	100	ENSMUST00000078470.12	ENSMUSG00000058248.13	Kcnh1	chr1	protein_coding	potassium voltage-gated channel, subfamily H (eag-related), member 1
chr1	191959398	192019708	+	191959479	192019708	A5SS	0.5	50	50	ENSMUST00000078470.12	ENSMUSG00000058248.13	Kcnh1	chr1	protein_coding	potassium voltage-gated channel, subfamily H (eag-related), member 1
chr1	192196283	192235247	-	192179156	192235247	A3SS	0.33	50	50	ENSMUST00000128619.8	ENSMUSG00000037375.17	Hhat	chr1	protein_coding	hedgehog acyltransferase
chr1	192225569	192235247	-	192179156	192235247	A3SS	0.33	50	50	ENSMUST00000128619.8	ENSMUSG00000037375.17	Hhat	chr1	protein_coding	hedgehog acyltransferase
chr1	192312552	192343764	-	192277396	192343764	A3SS	0.33	50	50	ENSMUST00000128619.8	ENSMUSG00000037375.17	Hhat	chr1	protein_coding	hedgehog acyltransferase
chr1	192339912	192343764	-	192277396	192343764	A3SS	0.33	50	50	ENSMUST00000128619.8	ENSMUSG00000037375.17	Hhat	chr1	protein_coding	hedgehog acyltransferase
chr1	192418801	192423818	-	192409786	192423818	A3SS	0.5	50	50	ENSMUST00000128619.8	ENSMUSG00000037375.17	Hhat	chr1	protein_coding	hedgehog acyltransferase
chr1	192343799	192369258	-	192343799	192376107	A5SS	0.5	50	50	ENSMUST00000128619.8	ENSMUSG00000037375.17	Hhat	chr1	protein_coding	hedgehog acyltransferase
chr1	192409786	192419268	-	192409786	192423818	A5SS	0.5	50	50	ENSMUST00000128619.8	ENSMUSG00000037375.17	Hhat	chr1	protein_coding	hedgehog acyltransferase
chr1	192225569	192235247	-	192196283	192235247	A3SS	0.33	50	50	ENSMUST00000044190.12	ENSMUSG00000037375.17	Hhat	chr1	protein_coding	hedgehog acyltransferase
chr1	192339912	192343764	-	192312552	192343764	A3SS	0.33	50	50	ENSMUST00000154755.7	ENSMUSG00000037375.17	Hhat	chr1	protein_coding	hedgehog acyltransferase
chr1	192524037	192524760	+	192524681	192524760	A5SS&ES	0.5	50	50	ENSMUST00000190576.3	ENSMUSG00000100872.3	1700065J18Rik	chr1	lncRNA	RIKEN cDNA 1700065J18 gene
chr1	192537368	192537751	-	192533451	192537751	A3SS	0.5	50	50	ENSMUST00000155579.8	ENSMUSG00000016262.15	Sertad4	chr1	protein_coding	SERTA domain containing 4
chr1	192533451	192534001	-	192533451	192537751	A5SS	0.5	50	50	ENSMUST00000155579.8	ENSMUSG00000016262.15	Sertad4	chr1	protein_coding	SERTA domain containing 4
chr1	192662869	192669026	-	192662869;192667219	192665828;192669026	ES	0.33	50	50	ENSMUST00000215093.2	ENSMUSG00000016200.15	Syt14	chr1	protein_coding	synaptotagmin XIV
chr1	192579928;192581215	192581159;192584060	-	192579928	192584060	cassetteExon	0.5	100	100	ENSMUST00000215093.2	ENSMUSG00000016200.15	Syt14	chr1	protein_coding	synaptotagmin XIV
chr1	192667219	192669026	-	192662869	192669026	A3SS	0.33	50	50	ENSMUST00000195354.6	ENSMUSG00000016200.15	Syt14	chr1	protein_coding	synaptotagmin XIV
chr1	192662869	192665828	-	192662869	192669026	A5SS	0.5	50	50	ENSMUST00000195354.6	ENSMUSG00000016200.15	Syt14	chr1	protein_coding	synaptotagmin XIV
chr1	192615693	192709278	-	192669190	192709278	A3SS&ES	0.5	50	50	ENSMUST00000195530.6	ENSMUSG00000016200.15	Syt14	chr1	protein_coding	synaptotagmin XIV
chr1	192662869	192669026	-	192584249	192669026	A3SS	0.33	50	50	ENSMUST00000195530.6	ENSMUSG00000016200.15	Syt14	chr1	protein_coding	synaptotagmin XIV
chr1	192667219	192669026	-	192584249	192669026	A3SS	0.33	50	50	ENSMUST00000195530.6	ENSMUSG00000016200.15	Syt14	chr1	protein_coding	synaptotagmin XIV
chr1	192584249	192612786	-	192584249	192669026	A5SS	0.5	50	50	ENSMUST00000195530.6	ENSMUSG00000016200.15	Syt14	chr1	protein_coding	synaptotagmin XIV
chr1	192615693	192662654	-	192615693	192709278	A5SS	0.5	50	50	ENSMUST00000191907.2	ENSMUSG00000016200.15	Syt14	chr1	protein_coding	synaptotagmin XIV
chr1	192790094	192796065	-	192775005	192796065	A3SS	0.5	50	50	ENSMUST00000194412.2	ENSMUSG00000016181.10	Utp25	chr1	protein_coding	UTP25 small subunit processome component
chr1	192790094	192796913	-	192796195	192796913	A3SS&ES	0.25	50	50	ENSMUST00000194412.2	ENSMUSG00000016181.10	Utp25	chr1	protein_coding	UTP25 small subunit processome component
chr1	192796288	192796913	-	192796195	192796913	A3SS	0.25	50	50	ENSMUST00000194412.2	ENSMUSG00000016181.10	Utp25	chr1	protein_coding	UTP25 small subunit processome component
chr1	192796310	192796913	-	192796195	192796913	A3SS	0.25	50	50	ENSMUST00000194412.2	ENSMUSG00000016181.10	Utp25	chr1	protein_coding	UTP25 small subunit processome component
chr1	192790094	192796913	-	192796310	192796913	A3SS&ES	0.25	50	50	ENSMUST00000193460.6	ENSMUSG00000016181.10	Utp25	chr1	protein_coding	UTP25 small subunit processome component
chr1	192796288	192796913	-	192796310	192796913	A3SS	0.25	50	50	ENSMUST00000193460.6	ENSMUSG00000016181.10	Utp25	chr1	protein_coding	UTP25 small subunit processome component
chr1	192790094	192796913	-	192790094;192796310	192796065;192796913	ES	0.25	50	50	ENSMUST00000085555.7	ENSMUSG00000016181.10	Utp25	chr1	protein_coding	UTP25 small subunit processome component
chr1	192806116	192811799	-	192806116;192810854	192810575;192811799	ES	0.5	50	50	ENSMUST00000085555.7	ENSMUSG00000016181.10	Utp25	chr1	protein_coding	UTP25 small subunit processome component
chr1	192804402;192805695	192805626;192805946	-	192804402	192805946	cassetteExon	0.5	100	100	ENSMUST00000085555.7	ENSMUSG00000016181.10	Utp25	chr1	protein_coding	UTP25 small subunit processome component
chr1	192804486	192805946	-	192804402	192805946	A3SS	0.33	50	50	ENSMUST00000085555.7	ENSMUSG00000016181.10	Utp25	chr1	protein_coding	UTP25 small subunit processome component
chr1	192790094	192796913	-	192790094;192796288	192796065;192796913	ES	0.25	50	50	ENSMUST00000195291.6	ENSMUSG00000016181.10	Utp25	chr1	protein_coding	UTP25 small subunit processome component
chr1	192790094;192796195	192796065;192796913	-	192790094	192796913	cassetteExon	0.5	100	100	ENSMUST00000193070.2	ENSMUSG00000016181.10	Utp25	chr1	protein_coding	UTP25 small subunit processome component
chr1	192806116	192811799	-	192806116	192810575	5pMXE	0.5	50	50	ENSMUST00000194335.6	ENSMUSG00000016181.10	Utp25	chr1	protein_coding	UTP25 small subunit processome component
chr1	192804486	192805946	-	192805695	192805946	A3SS&ES	0.33	50	50	ENSMUST00000194335.6	ENSMUSG00000016181.10	Utp25	chr1	protein_coding	UTP25 small subunit processome component
chr1	192850943	192856553	+	192850943	192851590	3pMXE	0.5	50	50	ENSMUST00000076521.7	ENSMUSG00000026638.16	Irf6	chr1	protein_coding	interferon regulatory factor 6
chr1	192850439	192850825	+	192850139	192850825	A5SS	0.5	50	50	ENSMUST00000076521.7	ENSMUSG00000026638.16	Irf6	chr1	protein_coding	interferon regulatory factor 6
chr1	192855818	192856553	+	192850943	192856553	A5SS	0.14	50	50	ENSMUST00000160822.3	ENSMUSG00000079144.8	A130010J15Rik	chr1	protein_coding	RIKEN cDNA A130010J15 gene
chr1	192855864	192856553	+	192850943	192856553	A5SS	0.14	50	50	ENSMUST00000160822.3	ENSMUSG00000079144.8	A130010J15Rik	chr1	protein_coding	RIKEN cDNA A130010J15 gene
chr1	192856078	192856553	+	192850943	192856553	A5SS	0.14	50	50	ENSMUST00000160822.3	ENSMUSG00000079144.8	A130010J15Rik	chr1	protein_coding	RIKEN cDNA A130010J15 gene
chr1	192856084	192856553	+	192850943	192856553	A5SS	0.14	50	50	ENSMUST00000160822.3	ENSMUSG00000079144.8	A130010J15Rik	chr1	protein_coding	RIKEN cDNA A130010J15 gene
chr1	192856088	192856553	+	192850943	192856553	A5SS	0.14	50	50	ENSMUST00000160822.3	ENSMUSG00000079144.8	A130010J15Rik	chr1	protein_coding	RIKEN cDNA A130010J15 gene
chr1	192856405	192856553	+	192850943	192856553	A5SS	0.14	50	50	ENSMUST00000160822.3	ENSMUSG00000079144.8	A130010J15Rik	chr1	protein_coding	RIKEN cDNA A130010J15 gene
chr1	192855864	192856553	+	192855818	192856553	A5SS	0.14	50	50	ENSMUST00000161235.3	ENSMUSG00000079144.8	A130010J15Rik	chr1	protein_coding	RIKEN cDNA A130010J15 gene
chr1	192856078	192856553	+	192855818	192856553	A5SS	0.14	50	50	ENSMUST00000161235.3	ENSMUSG00000079144.8	A130010J15Rik	chr1	protein_coding	RIKEN cDNA A130010J15 gene
chr1	192856084	192856553	+	192855818	192856553	A5SS	0.14	50	50	ENSMUST00000161235.3	ENSMUSG00000079144.8	A130010J15Rik	chr1	protein_coding	RIKEN cDNA A130010J15 gene
chr1	192856088	192856553	+	192855818	192856553	A5SS	0.14	50	50	ENSMUST00000161235.3	ENSMUSG00000079144.8	A130010J15Rik	chr1	protein_coding	RIKEN cDNA A130010J15 gene
chr1	192856405	192856553	+	192855818	192856553	A5SS	0.14	50	50	ENSMUST00000161235.3	ENSMUSG00000079144.8	A130010J15Rik	chr1	protein_coding	RIKEN cDNA A130010J15 gene
chr1	192856078	192856553	+	192855864	192856553	A5SS	0.14	50	50	ENSMUST00000160077.2	ENSMUSG00000079144.8	A130010J15Rik	chr1	protein_coding	RIKEN cDNA A130010J15 gene
chr1	192856084	192856553	+	192855864	192856553	A5SS	0.14	50	50	ENSMUST00000160077.2	ENSMUSG00000079144.8	A130010J15Rik	chr1	protein_coding	RIKEN cDNA A130010J15 gene
chr1	192856088	192856553	+	192855864	192856553	A5SS	0.14	50	50	ENSMUST00000160077.2	ENSMUSG00000079144.8	A130010J15Rik	chr1	protein_coding	RIKEN cDNA A130010J15 gene
chr1	192856405	192856553	+	192855864	192856553	A5SS	0.14	50	50	ENSMUST00000160077.2	ENSMUSG00000079144.8	A130010J15Rik	chr1	protein_coding	RIKEN cDNA A130010J15 gene
chr1	192856084	192856553	+	192856078	192856553	A5SS	0.14	50	50	ENSMUST00000178744.2	ENSMUSG00000079144.8	A130010J15Rik	chr1	protein_coding	RIKEN cDNA A130010J15 gene
chr1	192856088	192856553	+	192856078	192856553	A5SS	0.14	50	50	ENSMUST00000178744.2	ENSMUSG00000079144.8	A130010J15Rik	chr1	protein_coding	RIKEN cDNA A130010J15 gene
chr1	192856405	192856553	+	192856078	192856553	A5SS	0.14	50	50	ENSMUST00000178744.2	ENSMUSG00000079144.8	A130010J15Rik	chr1	protein_coding	RIKEN cDNA A130010J15 gene
chr1	192856088	192856553	+	192856084	192856553	A5SS	0.14	50	50	ENSMUST00000192189.2	ENSMUSG00000079144.8	A130010J15Rik	chr1	protein_coding	RIKEN cDNA A130010J15 gene
chr1	192856405	192856553	+	192856084	192856553	A5SS	0.14	50	50	ENSMUST00000192189.2	ENSMUSG00000079144.8	A130010J15Rik	chr1	protein_coding	RIKEN cDNA A130010J15 gene
chr1	192856405	192856553	+	192856088	192856553	A5SS	0.14	50	50	ENSMUST00000110831.4	ENSMUSG00000079144.8	A130010J15Rik	chr1	protein_coding	RIKEN cDNA A130010J15 gene
chr1	192858067;192859242	192859130;192860472	-	192858067	192860472	cassetteExon	0.5	100	100	ENSMUST00000192020.6	ENSMUSG00000037318.11	Traf3ip3	chr1	protein_coding	TRAF3 interacting protein 3
chr1	192867242;192868987	192868942;192869407	-	192867242	192869407	cassetteExon	0.5	100	100	ENSMUST00000192020.6	ENSMUSG00000037318.11	Traf3ip3	chr1	protein_coding	TRAF3 interacting protein 3
chr1	192880385;192883306	192883201;192883603	-	192880385	192883603	cassetteExon	0.5	100	100	ENSMUST00000192020.6	ENSMUSG00000037318.11	Traf3ip3	chr1	protein_coding	TRAF3 interacting protein 3
chr1	192869480	192876597	-	192869478	192876597	A3SS	0.5	50	50	ENSMUST00000192020.6	ENSMUSG00000037318.11	Traf3ip3	chr1	protein_coding	TRAF3 interacting protein 3
chr1	192877157	192879986	-	192877730	192879986	A3SS&ES	0.5	50	50	ENSMUST00000194278.6	ENSMUSG00000037318.11	Traf3ip3	chr1	protein_coding	TRAF3 interacting protein 3
chr1	192880521	192883201	-	192880385	192883201	A3SS	0.33	50	50	ENSMUST00000194278.6	ENSMUSG00000037318.11	Traf3ip3	chr1	protein_coding	TRAF3 interacting protein 3
chr1	192880734	192883201	-	192880385	192883201	A3SS	0.33	50	50	ENSMUST00000194278.6	ENSMUSG00000037318.11	Traf3ip3	chr1	protein_coding	TRAF3 interacting protein 3
chr1	192877157;192877730	192877381;192879986	-	192877157	192879986	cassetteExon	0.5	100	100	ENSMUST00000161367.2	ENSMUSG00000037318.11	Traf3ip3	chr1	protein_coding	TRAF3 interacting protein 3
chr1	192880385	192883603	-	192883306	192883603	A3SS&ES	0.5	50	50	ENSMUST00000161145.8	ENSMUSG00000037318.11	Traf3ip3	chr1	protein_coding	TRAF3 interacting protein 3
chr1	192880734	192883201	-	192880521	192883201	A3SS	0.33	50	50	ENSMUST00000161145.8	ENSMUSG00000037318.11	Traf3ip3	chr1	protein_coding	TRAF3 interacting protein 3
chr1	192890185	192935285	+	192890185	192951752	A3SS	0.5	50	50	ENSMUST00000194677.6	ENSMUSG00000026639.19	Lamb3	chr1	protein_coding	laminin, beta 3
chr1	192955736	192962531	+	192951870	192962531	A5SS	0.5	50	50	ENSMUST00000194677.6	ENSMUSG00000026639.19	Lamb3	chr1	protein_coding	laminin, beta 3
chr1	192984449	192985796	+	192976744	192985796	A5SS	0.25	50	50	ENSMUST00000194677.6	ENSMUSG00000026639.19	Lamb3	chr1	protein_coding	laminin, beta 3
chr1	192984659	192985796	+	192976744	192985796	A5SS	0.25	50	50	ENSMUST00000194677.6	ENSMUSG00000026639.19	Lamb3	chr1	protein_coding	laminin, beta 3
chr1	193003030	193003361	+	193002854	193003361	A5SS	0.5	50	50	ENSMUST00000194677.6	ENSMUSG00000026639.19	Lamb3	chr1	protein_coding	laminin, beta 3
chr1	192951870	192962531	+	192951870	192985796	A3SS	0.5	50	50	ENSMUST00000192322.6	ENSMUSG00000026639.19	Lamb3	chr1	protein_coding	laminin, beta 3
chr1	192976744	192985796	+	192951870	192985796	A5SS	0.25	50	50	ENSMUST00000192322.6	ENSMUSG00000026639.19	Lamb3	chr1	protein_coding	laminin, beta 3
chr1	192984449	192985796	+	192951870	192985796	A5SS	0.25	50	50	ENSMUST00000192322.6	ENSMUSG00000026639.19	Lamb3	chr1	protein_coding	laminin, beta 3
chr1	192984659	192985796	+	192951870	192985796	A5SS	0.25	50	50	ENSMUST00000192322.6	ENSMUSG00000026639.19	Lamb3	chr1	protein_coding	laminin, beta 3
chr1	192984659	192985796	+	192984449	192985796	A5SS	0.25	50	50	ENSMUST00000016315.16	ENSMUSG00000026639.19	Lamb3	chr1	protein_coding	laminin, beta 3
chr1	192984659	192985796	+	192984659	192985599	3pMXE	0.5	50	50	ENSMUST00000162180.3	ENSMUSG00000026639.19	Lamb3	chr1	protein_coding	laminin, beta 3
chr1	192911979	192922539	-	192906073	192922539	A3SS	0.33	50	50	ENSMUST00000016338.15	ENSMUSG00000016194.15	Hsd11b1	chr1	protein_coding	hydroxysteroid 11-beta dehydrogenase 1
chr1	192920905	192922539	-	192906073	192922539	A3SS	0.33	50	50	ENSMUST00000016338.15	ENSMUSG00000016194.15	Hsd11b1	chr1	protein_coding	hydroxysteroid 11-beta dehydrogenase 1
chr1	192924596	192925702	-	192924596	192946256	A5SS	0.5	50	50	ENSMUST00000161737.8	ENSMUSG00000016194.15	Hsd11b1	chr1	protein_coding	hydroxysteroid 11-beta dehydrogenase 1
chr1	192920905	192922539	-	192911979	192922539	A3SS	0.33	50	50	ENSMUST00000161406.2	ENSMUSG00000016194.15	Hsd11b1	chr1	protein_coding	hydroxysteroid 11-beta dehydrogenase 1
chr1	193029755;193030792	193030365;193031027	-	193029755	193031027	cassetteExon	0.5	100	100	ENSMUST00000169907.8	ENSMUSG00000016179.12	Camk1g	chr1	protein_coding	calcium/calmodulin-dependent protein kinase I gamma
chr1	193034751;193036173	193036132;193036300	-	193034751	193036300	cassetteExon	0.5	100	100	ENSMUST00000169907.8	ENSMUSG00000016179.12	Camk1g	chr1	protein_coding	calcium/calmodulin-dependent protein kinase I gamma
chr1	193042155;193043975	193043888;193044321	-	193042155	193044321	cassetteExon	0.5	100	100	ENSMUST00000169907.8	ENSMUSG00000016179.12	Camk1g	chr1	protein_coding	calcium/calmodulin-dependent protein kinase I gamma
chr1	194449869;194451864	194451677;194462821	+	194449869	194462821	cassetteExon	0.5	100	100	ENSMUST00000027952.12	ENSMUSG00000026640.13	Plxna2	chr1	protein_coding	plexin A2
chr1	194331946	194338645	+	194331946	194394492	A3SS	0.5	50	50	ENSMUST00000027952.12	ENSMUSG00000026640.13	Plxna2	chr1	protein_coding	plexin A2
chr1	194630314	194631690	+	194630314	194631613	A3SS	0.5	50	50	ENSMUST00000016638.8	ENSMUSG00000016494.10	Cd34	chr1	protein_coding	CD34 antigen
chr1	194641538	194642088	+	194641538	194642244	A3SS	0.5	50	50	ENSMUST00000016638.8	ENSMUSG00000016494.10	Cd34	chr1	protein_coding	CD34 antigen
chr1	194699859	194700909	+	194665217	194700909	A5SS	0.5	50	50	ENSMUST00000181226.8	ENSMUSG00000096929.8	A330023F24Rik	chr1	lncRNA	RIKEN cDNA A330023F24 gene
chr1	194750476	194759962	-	194750476;194757865	194757818;194759962	ES	0.33	50	50	ENSMUST00000162650.8	ENSMUSG00000016493.14	Cd46	chr1	protein_coding	CD46 antigen, complement regulatory protein
chr1	194757865;194758911	194758839;194759962	-	194757865	194759962	cassetteExon	0.5	100	100	ENSMUST00000162650.8	ENSMUSG00000016493.14	Cd46	chr1	protein_coding	CD46 antigen, complement regulatory protein
chr1	194758911	194759962	-	194750476	194759962	A3SS	0.33	50	50	ENSMUST00000162951.2	ENSMUSG00000016493.14	Cd46	chr1	protein_coding	CD46 antigen, complement regulatory protein
chr1	194781149	194793388	-	194781149;194789230	194789126;194793388	ES	0.33	50	50	ENSMUST00000193094.6	ENSMUSG00000016481.16	Cr1l	chr1	protein_coding	complement component (3b/4b) receptor 1-like
chr1	194812317	194813810	-	194812317	194813496	5pMXE	0.25	50	50	ENSMUST00000193094.6	ENSMUSG00000016481.16	Cr1l	chr1	protein_coding	complement component (3b/4b) receptor 1-like
chr1	194786215	194789126	-	194781149	194789126	A3SS	0.5	50	50	ENSMUST00000193094.6	ENSMUSG00000016481.16	Cr1l	chr1	protein_coding	complement component (3b/4b) receptor 1-like
chr1	194786215	194793388	-	194789230	194793388	A3SS&ES	0.33	50	50	ENSMUST00000193094.6	ENSMUSG00000016481.16	Cr1l	chr1	protein_coding	complement component (3b/4b) receptor 1-like
chr1	194812317	194813368	-	194812317	194813496	A5SS	0.25	50	50	ENSMUST00000193094.6	ENSMUSG00000016481.16	Cr1l	chr1	protein_coding	complement component (3b/4b) receptor 1-like
chr1	194812317	194813396	-	194812317	194813496	A5SS	0.25	50	50	ENSMUST00000193094.6	ENSMUSG00000016481.16	Cr1l	chr1	protein_coding	complement component (3b/4b) receptor 1-like
chr1	194812317	194813810	-	194812317	194813368	5pMXE	0.25	50	50	ENSMUST00000194111.6	ENSMUSG00000016481.16	Cr1l	chr1	protein_coding	complement component (3b/4b) receptor 1-like
chr1	194786215	194793388	-	194781149	194793388	A3SS	0.33	50	50	ENSMUST00000194111.6	ENSMUSG00000016481.16	Cr1l	chr1	protein_coding	complement component (3b/4b) receptor 1-like
chr1	194812317	194813396	-	194812317	194813368	A5SS	0.25	50	50	ENSMUST00000194111.6	ENSMUSG00000016481.16	Cr1l	chr1	protein_coding	complement component (3b/4b) receptor 1-like
chr1	194786215	194793388	-	194786215;194789230	194789126;194793388	ES	0.5	50	50	ENSMUST00000075451.12	ENSMUSG00000016481.16	Cr1l	chr1	protein_coding	complement component (3b/4b) receptor 1-like
chr1	194812317	194813396	-	194812317	194813810	A5SS	0.25	50	50	ENSMUST00000191775.2	ENSMUSG00000016481.16	Cr1l	chr1	protein_coding	complement component (3b/4b) receptor 1-like
chr1	194848698	194858861	-	194845895	194858861	A3SS	0.25	50	50	ENSMUST00000082321.9	ENSMUSG00000026616.17	Cr2	chr1	protein_coding	complement receptor 2
chr1	194853478	194858861	-	194845895	194858861	A3SS	0.25	50	50	ENSMUST00000082321.9	ENSMUSG00000026616.17	Cr2	chr1	protein_coding	complement receptor 2
chr1	194822106	194823487	-	194822106	194823483	A5SS	0.33	50	50	ENSMUST00000082321.9	ENSMUSG00000026616.17	Cr2	chr1	protein_coding	complement receptor 2
chr1	194833254	194833874	-	194833254	194833880	A5SS	0.33	50	50	ENSMUST00000082321.9	ENSMUSG00000026616.17	Cr2	chr1	protein_coding	complement receptor 2
chr1	194833254	194833876	-	194833254	194833880	A5SS	0.33	50	50	ENSMUST00000082321.9	ENSMUSG00000026616.17	Cr2	chr1	protein_coding	complement receptor 2
chr1	194845895	194847347	-	194845895	194858861	A5SS	0.33	50	50	ENSMUST00000082321.9	ENSMUSG00000026616.17	Cr2	chr1	protein_coding	complement receptor 2
chr1	194845895	194848057	-	194845895	194858861	A5SS	0.33	50	50	ENSMUST00000082321.9	ENSMUSG00000026616.17	Cr2	chr1	protein_coding	complement receptor 2
chr1	194833254	194833874	-	194833254	194833876	A5SS	0.33	50	50	ENSMUST00000195120.6	ENSMUSG00000026616.17	Cr2	chr1	protein_coding	complement receptor 2
chr1	194845895	194858861	-	194822106	194858861	A3SS	0.25	50	50	ENSMUST00000193801.2	ENSMUSG00000026616.17	Cr2	chr1	protein_coding	complement receptor 2
chr1	194848698	194858861	-	194822106	194858861	A3SS	0.25	50	50	ENSMUST00000193801.2	ENSMUSG00000026616.17	Cr2	chr1	protein_coding	complement receptor 2
chr1	194853478	194858861	-	194822106	194858861	A3SS	0.25	50	50	ENSMUST00000193801.2	ENSMUSG00000026616.17	Cr2	chr1	protein_coding	complement receptor 2
chr1	194822106	194823483	-	194822106	194858861	A5SS	0.33	50	50	ENSMUST00000193801.2	ENSMUSG00000026616.17	Cr2	chr1	protein_coding	complement receptor 2
chr1	194822106	194823487	-	194822106	194858861	A5SS	0.33	50	50	ENSMUST00000193801.2	ENSMUSG00000026616.17	Cr2	chr1	protein_coding	complement receptor 2
chr1	194845895	194848057	-	194845895;194847432	194847347;194848057	ES	0.5	50	50	ENSMUST00000210219.2	ENSMUSG00000026616.17	Cr2	chr1	protein_coding	complement receptor 2
chr1	194848698	194858861	-	194848698	194850642	5pMXE	0.5	50	50	ENSMUST00000194149.6	ENSMUSG00000026616.17	Cr2	chr1	protein_coding	complement receptor 2
chr1	194853478	194858861	-	194848698	194858861	A3SS	0.5	50	50	ENSMUST00000195347.6	ENSMUSG00000026616.17	Cr2	chr1	protein_coding	complement receptor 2
chr2	3221406	3225855	+	3221406;3224621	3224507;3225855	ES	0.5	50	50	ENSMUST00000072955.12	ENSMUSG00000050530.15	Fam171a1	chr2	protein_coding	family with sequence similarity 171, member A1
chr2	3119689	3179273	+	3115302	3179273	A5SS	0.33	50	50	ENSMUST00000072955.12	ENSMUSG00000050530.15	Fam171a1	chr2	protein_coding	family with sequence similarity 171, member A1
chr2	3119972	3179273	+	3115302	3179273	A5SS	0.33	50	50	ENSMUST00000072955.12	ENSMUSG00000050530.15	Fam171a1	chr2	protein_coding	family with sequence similarity 171, member A1
chr2	3119972	3179273	+	3119689	3179273	A5SS	0.33	50	50	ENSMUST00000115099.9	ENSMUSG00000050530.15	Fam171a1	chr2	protein_coding	family with sequence similarity 171, member A1
chr2	3306476	3310504	+	3306476;3308069	3308020;3310504	ES	0.33	50	50	ENSMUST00000081932.13	ENSMUSG00000026643.17	Nmt2	chr2	protein_coding	N-myristoyltransferase 2
chr2	3305984;3306476	3306434;3310504	+	3305984	3310504	cassetteExon	0.5	100	100	ENSMUST00000102989.10	ENSMUSG00000026643.17	Nmt2	chr2	protein_coding	N-myristoyltransferase 2
chr2	3308069	3310504	+	3305984	3310504	A5SS	0.33	50	50	ENSMUST00000102989.10	ENSMUSG00000026643.17	Nmt2	chr2	protein_coding	N-myristoyltransferase 2
chr2	3341490	3341592	+	3341487	3341592	A5SS	0.5	50	50	ENSMUST00000115089.2	ENSMUSG00000026644.8	Acbd7	chr2	protein_coding	acyl-Coenzyme A binding domain containing 7
chr2	3366488	3367477	-	3366485	3367477	A3SS	0.5	50	50	ENSMUST00000027955.11	ENSMUSG00000026645.12	Olah	chr2	protein_coding	oleoyl-ACP hydrolase
chr2	3413048	3420008	-	3413048;3414543	3414398;3420008	ES	0.5	50	50	ENSMUST00000115084.8	ENSMUSG00000026650.16	Meig1	chr2	protein_coding	meiosis expressed gene 1
chr2	3414543	3423428	-	3414543	3420008	5pMXE	0.5	50	50	ENSMUST00000115084.8	ENSMUSG00000026650.16	Meig1	chr2	protein_coding	meiosis expressed gene 1
chr2	3413048	3419579	-	3413048	3414398	A5SS&ES	0.25	50	50	ENSMUST00000115084.8	ENSMUSG00000026650.16	Meig1	chr2	protein_coding	meiosis expressed gene 1
chr2	3413048	3419957	-	3413048	3414398	A5SS&ES	0.25	50	50	ENSMUST00000115084.8	ENSMUSG00000026650.16	Meig1	chr2	protein_coding	meiosis expressed gene 1
chr2	3413048;3414543	3414398;3423428	-	3413048	3423428	cassetteExon	0.5	100	100	ENSMUST00000064685.14	ENSMUSG00000026650.16	Meig1	chr2	protein_coding	meiosis expressed gene 1
chr2	3413048	3419579	-	3413048	3423428	A5SS	0.2	50	50	ENSMUST00000064685.14	ENSMUSG00000026650.16	Meig1	chr2	protein_coding	meiosis expressed gene 1
chr2	3413048	3419957	-	3413048	3423428	A5SS	0.2	50	50	ENSMUST00000064685.14	ENSMUSG00000026650.16	Meig1	chr2	protein_coding	meiosis expressed gene 1
chr2	3413048	3420008	-	3413048	3423428	A5SS	0.2	50	50	ENSMUST00000064685.14	ENSMUSG00000026650.16	Meig1	chr2	protein_coding	meiosis expressed gene 1
chr2	3413048	3419579	-	3413048	3419957	A5SS	0.2	50	50	ENSMUST00000115083.8	ENSMUSG00000026650.16	Meig1	chr2	protein_coding	meiosis expressed gene 1
chr2	3413048	3420008	-	3413048	3419957	A5SS	0.2	50	50	ENSMUST00000115083.8	ENSMUSG00000026650.16	Meig1	chr2	protein_coding	meiosis expressed gene 1
chr2	3413048	3419579	-	3413048	3420008	A5SS	0.2	50	50	ENSMUST00000115082.10	ENSMUSG00000026650.16	Meig1	chr2	protein_coding	meiosis expressed gene 1
chr2	3413048	3420008	-	3413048	3414398	A5SS&ES	0.2	50	50	ENSMUST00000144584.2	ENSMUSG00000026650.16	Meig1	chr2	protein_coding	meiosis expressed gene 1
chr2	3426452	3434784	+	3426452;3430389	3430305;3434784	ES	0.5	50	50	ENSMUST00000100463.10	ENSMUSG00000026648.19	Dclre1c	chr2	protein_coding	DNA cross-link repair 1C
chr2	3451410;3454235	3453885;3458581	+	3451410	3458581	cassetteExon	0.5	100	100	ENSMUST00000100463.10	ENSMUSG00000026648.19	Dclre1c	chr2	protein_coding	DNA cross-link repair 1C
chr2	3434843	3438067	+	3434843	3437475	A3SS&ES	0.5	50	50	ENSMUST00000100463.10	ENSMUSG00000026648.19	Dclre1c	chr2	protein_coding	DNA cross-link repair 1C
chr2	3437530	3438039	+	3437530	3438026	A3SS	0.33	50	50	ENSMUST00000100463.10	ENSMUSG00000026648.19	Dclre1c	chr2	protein_coding	DNA cross-link repair 1C
chr2	3437530	3438067	+	3437530	3438026	A3SS	0.33	50	50	ENSMUST00000100463.10	ENSMUSG00000026648.19	Dclre1c	chr2	protein_coding	DNA cross-link repair 1C
chr2	3438123	3438713	+	3438127	3438713	A5SS	0.5	50	50	ENSMUST00000100463.10	ENSMUSG00000026648.19	Dclre1c	chr2	protein_coding	DNA cross-link repair 1C
chr2	3454235	3454632	+	3454235	3458581	A3SS	0.5	50	50	ENSMUST00000061852.12	ENSMUSG00000026648.19	Dclre1c	chr2	protein_coding	DNA cross-link repair 1C
chr2	3437530	3438067	+	3437530	3438039	A3SS	0.33	50	50	ENSMUST00000132565.8	ENSMUSG00000026648.19	Dclre1c	chr2	protein_coding	DNA cross-link repair 1C
chr2	3451410	3458581	+	3451410	3453885	3pMXE	0.5	50	50	ENSMUST00000102988.10	ENSMUSG00000026648.19	Dclre1c	chr2	protein_coding	DNA cross-link repair 1C
chr2	3434843	3438067	+	3434843;3437530	3437475;3438067	ES	0.5	50	50	ENSMUST00000146027.8	ENSMUSG00000026648.19	Dclre1c	chr2	protein_coding	DNA cross-link repair 1C
chr2	3463664	3473539	-	3463664;3465963	3465304;3473539	ES	0.5	50	50	ENSMUST00000027956.9	ENSMUSG00000026646.17	Suv39h2	chr2	protein_coding	suppressor of variegation 3-9 2
chr2	3465963	3475740	-	3465963;3473684	3473539;3475740	ES	0.5	50	50	ENSMUST00000027956.9	ENSMUSG00000026646.17	Suv39h2	chr2	protein_coding	suppressor of variegation 3-9 2
chr2	3465963	3475374	-	3465963	3473539	A5SS&ES	0.33	50	50	ENSMUST00000027956.9	ENSMUSG00000026646.17	Suv39h2	chr2	protein_coding	suppressor of variegation 3-9 2
chr2	3465963	3473539	-	3463664	3473539	A3SS	0.5	50	50	ENSMUST00000060618.13	ENSMUSG00000026646.17	Suv39h2	chr2	protein_coding	suppressor of variegation 3-9 2
chr2	3465963	3475740	-	3473684	3475740	A3SS&ES	0.5	50	50	ENSMUST00000060618.13	ENSMUSG00000026646.17	Suv39h2	chr2	protein_coding	suppressor of variegation 3-9 2
chr2	3463664	3465304	-	3463664	3473539	A5SS	0.5	50	50	ENSMUST00000060618.13	ENSMUSG00000026646.17	Suv39h2	chr2	protein_coding	suppressor of variegation 3-9 2
chr2	3465963	3475740	-	3465963	3475374	5pMXE	0.33	50	50	ENSMUST00000100458.4	ENSMUSG00000026646.17	Suv39h2	chr2	protein_coding	suppressor of variegation 3-9 2
chr2	3463664;3473684	3473539;3475740	-	3463664;3465963	3465304;3475740	MXE	0.5	100	100	ENSMUST00000127540.2	ENSMUSG00000026646.17	Suv39h2	chr2	protein_coding	suppressor of variegation 3-9 2
chr2	3510057	3512052	-	3503822	3512052	A3SS	0.33	50	50	ENSMUST00000027961.12	ENSMUSG00000109865.2	Hspa14	chr2	protein_coding	heat shock protein 14
chr2	3510132	3512052	-	3503822	3512052	A3SS	0.33	50	50	ENSMUST00000027961.12	ENSMUSG00000109865.2	Hspa14	chr2	protein_coding	heat shock protein 14
chr2	3510057	3512052	-	3510132	3512052	A3SS	0.5	50	50	ENSMUST00000124331.8	ENSMUSG00000051396.16	Gm45902	chr2	protein_coding	predicted gene 45902
chr2	3514278	3520338	+	3514133	3520338	A5SS	0.33	50	50	ENSMUST00000140610.8	ENSMUSG00000039496.9	Cdnf	chr2	protein_coding	cerebral dopamine neurotrophic factor
chr2	3514983	3520338	+	3514133	3520338	A5SS	0.33	50	50	ENSMUST00000140610.8	ENSMUSG00000039496.9	Cdnf	chr2	protein_coding	cerebral dopamine neurotrophic factor
chr2	3514983	3520338	+	3514278	3520338	A5SS	0.33	50	50	ENSMUST00000036350.3	ENSMUSG00000039496.9	Cdnf	chr2	protein_coding	cerebral dopamine neurotrophic factor
chr2	3774016	3779457	+	3774016	3779455	A3SS	0.5	50	50	ENSMUST00000226435.2	ENSMUSG00000026655.16	Fam107b	chr2	protein_coding	family with sequence similarity 107, member B
chr2	3614975	3649265	+	3572091	3649265	A5SS	0.5	50	50	ENSMUST00000226435.2	ENSMUSG00000026655.16	Fam107b	chr2	protein_coding	family with sequence similarity 107, member B
chr2	3705112	3773833	+	3649322	3773833	A5SS	0.16	50	50	ENSMUST00000226435.2	ENSMUSG00000026655.16	Fam107b	chr2	protein_coding	family with sequence similarity 107, member B
chr2	3705992	3773833	+	3649322	3773833	A5SS	0.16	50	50	ENSMUST00000226435.2	ENSMUSG00000026655.16	Fam107b	chr2	protein_coding	family with sequence similarity 107, member B
chr2	3714673	3773833	+	3649322	3773833	A5SS	0.16	50	50	ENSMUST00000226435.2	ENSMUSG00000026655.16	Fam107b	chr2	protein_coding	family with sequence similarity 107, member B
chr2	3732761	3773833	+	3649322	3773833	A5SS	0.16	50	50	ENSMUST00000226435.2	ENSMUSG00000026655.16	Fam107b	chr2	protein_coding	family with sequence similarity 107, member B
chr2	3771798	3773833	+	3649322	3773833	A5SS	0.16	50	50	ENSMUST00000226435.2	ENSMUSG00000026655.16	Fam107b	chr2	protein_coding	family with sequence similarity 107, member B
chr2	3775006	3779455	+	3774016	3779455	A5SS	0.5	50	50	ENSMUST00000226435.2	ENSMUSG00000026655.16	Fam107b	chr2	protein_coding	family with sequence similarity 107, member B
chr2	3705992	3773833	+	3705112	3773833	A5SS	0.16	50	50	ENSMUST00000115055.9	ENSMUSG00000026655.16	Fam107b	chr2	protein_coding	family with sequence similarity 107, member B
chr2	3714673	3773833	+	3705112	3773833	A5SS	0.16	50	50	ENSMUST00000115055.9	ENSMUSG00000026655.16	Fam107b	chr2	protein_coding	family with sequence similarity 107, member B
chr2	3732761	3773833	+	3705112	3773833	A5SS	0.16	50	50	ENSMUST00000115055.9	ENSMUSG00000026655.16	Fam107b	chr2	protein_coding	family with sequence similarity 107, member B
chr2	3771798	3773833	+	3705112	3773833	A5SS	0.16	50	50	ENSMUST00000115055.9	ENSMUSG00000026655.16	Fam107b	chr2	protein_coding	family with sequence similarity 107, member B
chr2	3714673	3773833	+	3705992	3773833	A5SS	0.16	50	50	ENSMUST00000115054.9	ENSMUSG00000026655.16	Fam107b	chr2	protein_coding	family with sequence similarity 107, member B
chr2	3732761	3773833	+	3705992	3773833	A5SS	0.16	50	50	ENSMUST00000115054.9	ENSMUSG00000026655.16	Fam107b	chr2	protein_coding	family with sequence similarity 107, member B
chr2	3771798	3773833	+	3705992	3773833	A5SS	0.16	50	50	ENSMUST00000115054.9	ENSMUSG00000026655.16	Fam107b	chr2	protein_coding	family with sequence similarity 107, member B
chr2	3714673;3732761	3732685;3773833	+	3714673	3773833	cassetteExon	0.5	100	100	ENSMUST00000027965.11	ENSMUSG00000026655.16	Fam107b	chr2	protein_coding	family with sequence similarity 107, member B
chr2	3771798	3773833	+	3714673	3773833	A5SS	0.16	50	50	ENSMUST00000027965.11	ENSMUSG00000026655.16	Fam107b	chr2	protein_coding	family with sequence similarity 107, member B
chr2	3771798	3773833	+	3732761	3773833	A5SS	0.33	50	50	ENSMUST00000115053.9	ENSMUSG00000026655.16	Fam107b	chr2	protein_coding	family with sequence similarity 107, member B
chr2	4022830	4023262	+	4022830	4171613	A3SS	0.33	50	50	ENSMUST00000138735.2	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4022830	4023272	+	4022830	4171613	A3SS	0.33	50	50	ENSMUST00000138735.2	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4157921	4171613	+	4022830	4171613	A5SS	0.5	50	50	ENSMUST00000138735.2	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4022830	4023272	+	4022830	4023262	A3SS	0.33	50	50	ENSMUST00000137809.2	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4610877	4615778	+	4610877;4612881	4612810;4615778	ES	0.5	50	50	ENSMUST00000177457.8	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4595553;4596813	4596695;4599350	+	4595553	4599350	cassetteExon	0.5	100	100	ENSMUST00000177457.8	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4157921	4436010	+	4023393	4436010	A5SS	0.14	50	50	ENSMUST00000177457.8	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4290488	4436010	+	4023393	4436010	A5SS	0.14	50	50	ENSMUST00000177457.8	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4305816	4436010	+	4023393	4436010	A5SS	0.14	50	50	ENSMUST00000177457.8	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4337939	4436010	+	4023393	4436010	A5SS	0.14	50	50	ENSMUST00000177457.8	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4394524	4436010	+	4023393	4436010	A5SS	0.14	50	50	ENSMUST00000177457.8	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4406404	4436010	+	4023393	4436010	A5SS	0.14	50	50	ENSMUST00000177457.8	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4157921	4436010	+	4157921	4171613	3pMXE	0.5	50	50	ENSMUST00000132710.3	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4290488	4436010	+	4157921	4436010	A5SS	0.14	50	50	ENSMUST00000091497.11	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4305816	4436010	+	4157921	4436010	A5SS	0.14	50	50	ENSMUST00000091497.11	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4337939	4436010	+	4157921	4436010	A5SS	0.14	50	50	ENSMUST00000091497.11	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4394524	4436010	+	4157921	4436010	A5SS	0.14	50	50	ENSMUST00000091497.11	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4406404	4436010	+	4157921	4436010	A5SS	0.14	50	50	ENSMUST00000091497.11	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4305816	4436010	+	4290488	4436010	A5SS	0.14	50	50	ENSMUST00000239018.2	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4337939	4436010	+	4290488	4436010	A5SS	0.14	50	50	ENSMUST00000239018.2	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4394524	4436010	+	4290488	4436010	A5SS	0.14	50	50	ENSMUST00000239018.2	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4406404	4436010	+	4290488	4436010	A5SS	0.14	50	50	ENSMUST00000239018.2	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4337939	4436010	+	4305816	4436010	A5SS	0.14	50	50	ENSMUST00000175669.8	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4394524	4436010	+	4305816	4436010	A5SS	0.14	50	50	ENSMUST00000175669.8	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4406404	4436010	+	4305816	4436010	A5SS	0.14	50	50	ENSMUST00000175669.8	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4502884	4518600	+	4502884	4534603	A3SS	0.5	50	50	ENSMUST00000176803.8	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4519830	4534603	+	4502884	4534603	A5SS	0.5	50	50	ENSMUST00000176803.8	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4394524	4436010	+	4337939	4436010	A5SS	0.14	50	50	ENSMUST00000175944.8	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4406404	4436010	+	4337939	4436010	A5SS	0.14	50	50	ENSMUST00000175944.8	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4406404	4436010	+	4394524	4436010	A5SS	0.14	50	50	ENSMUST00000115037.9	ENSMUSG00000026657.18	Frmd4a	chr2	protein_coding	FERM domain containing 4A
chr2	4137020	4140517	-	4137000	4140517	A3SS	0.5	50	50	ENSMUST00000141488.8	ENSMUSG00000084859.8	1700080N15Rik	chr2	lncRNA	RIKEN cDNA 1700080N15 gene
chr2	4143792	4145744	-	4140596	4145744	A3SS	0.5	50	50	ENSMUST00000141488.8	ENSMUSG00000084859.8	1700080N15Rik	chr2	lncRNA	RIKEN cDNA 1700080N15 gene
chr2	4140596	4142991	-	4140596	4145744	A5SS	0.5	50	50	ENSMUST00000141488.8	ENSMUSG00000084859.8	1700080N15Rik	chr2	lncRNA	RIKEN cDNA 1700080N15 gene
chr2	4140596	4145744	-	4140596;4143792	4142991;4145744	ES	0.5	50	50	ENSMUST00000154360.2	ENSMUSG00000084859.8	1700080N15Rik	chr2	lncRNA	RIKEN cDNA 1700080N15 gene
chr2	4302935	4305319	-	4292611	4305319	A3SS	0.5	50	50	ENSMUST00000132211.2	ENSMUSG00000087355.8	Gm13187	chr2	lncRNA	predicted gene 13187
chr2	4305448	4305782	-	4305470	4305782	A3SS	0.5	50	50	ENSMUST00000132211.2	ENSMUSG00000087355.8	Gm13187	chr2	lncRNA	predicted gene 13187
chr2	4650484;4652934	4652908;4653052	-	4650484	4653052	cassetteExon	0.5	100	100	ENSMUST00000035721.14	ENSMUSG00000039449.15	Prpf18	chr2	protein_coding	pre-mRNA processing factor 18
chr2	4648595	4650380	-	4648575	4650380	A3SS	0.5	50	50	ENSMUST00000035721.14	ENSMUSG00000039449.15	Prpf18	chr2	protein_coding	pre-mRNA processing factor 18
chr2	4650484	4656645	-	4650484	4653052	A5SS&ES	0.33	50	50	ENSMUST00000035721.14	ENSMUSG00000039449.15	Prpf18	chr2	protein_coding	pre-mRNA processing factor 18
chr2	4650484	4652908	-	4650484	4656645	A5SS	0.33	50	50	ENSMUST00000192470.2	ENSMUSG00000039449.15	Prpf18	chr2	protein_coding	pre-mRNA processing factor 18
chr2	4757802	4767893	+	4757802	4767889	A3SS	0.5	50	50	ENSMUST00000184139.8	ENSMUSG00000048186.15	Bend7	chr2	protein_coding	BEN domain containing 7
chr2	4793386	4801341	+	4793386	4801344	A3SS	0.5	50	50	ENSMUST00000184139.8	ENSMUSG00000048186.15	Bend7	chr2	protein_coding	BEN domain containing 7
chr2	4889416	4896398	+	4889416;4894097	4893994;4896398	ES	0.5	50	50	ENSMUST00000027973.14	ENSMUSG00000026662.14	Sephs1	chr2	protein_coding	selenophosphate synthetase 1
chr2	4887386	4889143	+	4886671	4889143	A5SS	0.5	50	50	ENSMUST00000027973.14	ENSMUSG00000026662.14	Sephs1	chr2	protein_coding	selenophosphate synthetase 1
chr2	4889416	4896398	+	4889416	4893994	3pMXE	0.5	50	50	ENSMUST00000144565.2	ENSMUSG00000026662.14	Sephs1	chr2	protein_coding	selenophosphate synthetase 1
chr2	4981120	4981621	+	4981120;4981531	4981466;4981621	ES	0.5	50	50	ENSMUST00000167607.8	ENSMUSG00000026668.11	Ucma	chr2	protein_coding	upper zone of growth plate and cartilage matrix associated
chr2	4981716;4986147	4986049;4990125	+	4981716	4990125	cassetteExon	0.5	100	100	ENSMUST00000167607.8	ENSMUSG00000026668.11	Ucma	chr2	protein_coding	upper zone of growth plate and cartilage matrix associated
chr2	4981716	4990125	+	4981716	4986049	3pMXE	0.5	50	50	ENSMUST00000127282.2	ENSMUSG00000026668.11	Ucma	chr2	protein_coding	upper zone of growth plate and cartilage matrix associated
chr2	5015586	5017516	-	5015586	5016706	5pMXE	0.5	50	50	ENSMUST00000102985.8	ENSMUSG00000026669.15	Mcm10	chr2	protein_coding	minichromosome maintenance 10 replication initiation factor
chr2	5013623	5017516	-	5013623;5015586	5015500;5017516	ES	0.5	50	50	ENSMUST00000027980.8	ENSMUSG00000026669.15	Mcm10	chr2	protein_coding	minichromosome maintenance 10 replication initiation factor
chr2	5059527;5067798	5067670;5068718	-	5059527	5068718	cassetteExon	0.5	100	100	ENSMUST00000114996.8	ENSMUSG00000026672.12	Optn	chr2	protein_coding	optineurin
chr2	5041581	5041825	-	5041581	5044950	A5SS	0.5	50	50	ENSMUST00000114996.8	ENSMUSG00000026672.12	Optn	chr2	protein_coding	optineurin
chr2	5570591	5680725	-	5570591	5718957	A5SS	0.33	50	50	ENSMUST00000044009.14	ENSMUSG00000039145.17	Camk1d	chr2	protein_coding	calcium/calmodulin-dependent protein kinase ID
chr2	5570591	5681043	-	5570591	5718957	A5SS	0.33	50	50	ENSMUST00000044009.14	ENSMUSG00000039145.17	Camk1d	chr2	protein_coding	calcium/calmodulin-dependent protein kinase ID
chr2	5570591	5681043	-	5570591	5680725	5pMXE	0.33	50	50	ENSMUST00000114987.4	ENSMUSG00000039145.17	Camk1d	chr2	protein_coding	calcium/calmodulin-dependent protein kinase ID
chr2	5814829	5815607	-	5812317	5815607	A3SS	0.5	50	50	ENSMUST00000043864.9	ENSMUSG00000039128.14	Cdc123	chr2	protein_coding	cell division cycle 123
chr2	5850196;5853001	5852919;5859627	+	5850196	5859627	cassetteExon	0.5	100	100	ENSMUST00000026927.10	ENSMUSG00000025817.13	Nudt5	chr2	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 5
chr2	5850196;5858427	5858324;5859627	+	5850196	5859627	cassetteExon	0.5	100	100	ENSMUST00000026927.10	ENSMUSG00000025817.13	Nudt5	chr2	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 5
chr2	5850196;5858427	5858324;5859627	+	5850196;5853001	5852919;5859627	MXE	0.5	100	100	ENSMUST00000127116.7	ENSMUSG00000025817.13	Nudt5	chr2	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 5
chr2	5850196	5859627	+	5853001	5859627	5pMXE	0.33	50	50	ENSMUST00000128604.2	ENSMUSG00000025817.13	Nudt5	chr2	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 5
chr2	5858427	5859627	+	5853001	5859627	A5SS	0.33	50	50	ENSMUST00000128604.2	ENSMUSG00000025817.13	Nudt5	chr2	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 5
chr2	5878630	5881175	-	5878630;5879229	5879038;5881175	ES	0.5	50	50	ENSMUST00000102981.10	ENSMUSG00000025816.16	Sec61a2	chr2	protein_coding	Sec61, alpha subunit 2 (S. cerevisiae)
chr2	5879229	5881652	-	5879229;5881372	5881175;5881652	ES	0.5	50	50	ENSMUST00000102981.10	ENSMUSG00000025816.16	Sec61a2	chr2	protein_coding	Sec61, alpha subunit 2 (S. cerevisiae)
chr2	5882819;5884511	5884428;5887392	-	5882819	5887392	cassetteExon	0.5	100	100	ENSMUST00000102981.10	ENSMUSG00000025816.16	Sec61a2	chr2	protein_coding	Sec61, alpha subunit 2 (S. cerevisiae)
chr2	5879229	5881171	-	5879229	5881175	A5SS	0.33	50	50	ENSMUST00000102981.10	ENSMUSG00000025816.16	Sec61a2	chr2	protein_coding	Sec61, alpha subunit 2 (S. cerevisiae)
chr2	5881812	5882499	-	5881812	5882666	A5SS	0.5	50	50	ENSMUST00000102981.10	ENSMUSG00000025816.16	Sec61a2	chr2	protein_coding	Sec61, alpha subunit 2 (S. cerevisiae)
chr2	5898032	5900071	-	5898032	5900068	A5SS	0.5	50	50	ENSMUST00000102981.10	ENSMUSG00000025816.16	Sec61a2	chr2	protein_coding	Sec61, alpha subunit 2 (S. cerevisiae)
chr2	5878630;5881372	5881175;5881652	-	5878630;5879229	5879038;5881652	MXE	0.5	100	100	ENSMUST00000193792.6	ENSMUSG00000025816.16	Sec61a2	chr2	protein_coding	Sec61, alpha subunit 2 (S. cerevisiae)
chr2	5879229;5881372	5881171;5881652	-	5879229	5881652	cassetteExon	0.5	100	100	ENSMUST00000193792.6	ENSMUSG00000025816.16	Sec61a2	chr2	protein_coding	Sec61, alpha subunit 2 (S. cerevisiae)
chr2	5878630	5881175	-	5878630	5879038	5pMXE	0.5	50	50	ENSMUST00000124859.2	ENSMUSG00000025816.16	Sec61a2	chr2	protein_coding	Sec61, alpha subunit 2 (S. cerevisiae)
chr2	5879229	5881652	-	5881372	5881652	3pMXE	0.5	50	50	ENSMUST00000132469.8	ENSMUSG00000025816.16	Sec61a2	chr2	protein_coding	Sec61, alpha subunit 2 (S. cerevisiae)
chr2	5900585	5903590	+	5900725	5903590	A5SS&ES	0.5	50	50	ENSMUST00000142787.8	ENSMUSG00000085818.8	Gm13267	chr2	lncRNA	predicted gene 13267
chr2	5930078	5934449	-	5928949	5934449	A3SS	0.5	50	50	ENSMUST00000095147.9	ENSMUSG00000025815.14	Dhtkd1	chr2	protein_coding	dehydrogenase E1 and transketolase domain containing 1
chr2	5928949	5929489	-	5928949	5934449	A5SS	0.5	50	50	ENSMUST00000095147.9	ENSMUSG00000025815.14	Dhtkd1	chr2	protein_coding	dehydrogenase E1 and transketolase domain containing 1
chr2	6056440;6056995	6056696;6060244	+	6056440	6060244	cassetteExon	0.5	100	100	ENSMUST00000060092.13	ENSMUSG00000043241.15	Upf2	chr2	protein_coding	UPF2 regulator of nonsense transcripts homolog (yeast)
chr2	6039062	6044923	+	6039062	6044920	A3SS	0.5	50	50	ENSMUST00000060092.13	ENSMUSG00000043241.15	Upf2	chr2	protein_coding	UPF2 regulator of nonsense transcripts homolog (yeast)
chr2	6045372	6051712	+	6045372	6051709	A3SS	0.5	50	50	ENSMUST00000060092.13	ENSMUSG00000043241.15	Upf2	chr2	protein_coding	UPF2 regulator of nonsense transcripts homolog (yeast)
chr2	6118924;6134640	6134439;6134853	-	6118924	6134853	cassetteExon	0.5	100	100	ENSMUST00000114942.9	ENSMUSG00000045319.14	Proser2	chr2	protein_coding	proline and serine rich 2
chr2	6118924	6134707	-	6118924	6134853	A5SS	0.33	50	50	ENSMUST00000114942.9	ENSMUSG00000045319.14	Proser2	chr2	protein_coding	proline and serine rich 2
chr2	6118924	6134439	-	6118924	6134707	A5SS	0.33	50	50	ENSMUST00000054254.12	ENSMUSG00000045319.14	Proser2	chr2	protein_coding	proline and serine rich 2
chr2	6118924	6134853	-	6134640	6134853	3pMXE	0.5	50	50	ENSMUST00000194054.2	ENSMUSG00000045319.14	Proser2	chr2	protein_coding	proline and serine rich 2
chr2	6139026	6143938	+	6139026	6143933	A3SS	0.5	50	50	ENSMUST00000195343.2	ENSMUSG00000102887.2	Gm10857	chr2	lncRNA	predicted gene 10857
chr2	6395933	6405091	+	6395933;6399366	6399284;6405091	ES	0.5	50	50	ENSMUST00000114937.8	ENSMUSG00000039046.16	Usp6nl	chr2	protein_coding	USP6 N-terminal like
chr2	6357675	6395866	+	6341270	6395866	A5SS	0.5	50	50	ENSMUST00000114937.8	ENSMUSG00000039046.16	Usp6nl	chr2	protein_coding	USP6 N-terminal like
chr2	6477265	6477596	+	6477265	6482875	A3SS	0.5	50	50	ENSMUST00000147685.2	ENSMUSG00000086109.3	Gm13391	chr2	lncRNA	predicted gene 13391
chr2	6552024	6558596	-	6552024;6554786	6554643;6558596	ES	0.5	50	50	ENSMUST00000002176.13	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6669008	6967190	-	6669008;6726424	6726228;6967190	ES	0.5	50	50	ENSMUST00000002176.13	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6551590	6551853	-	6550486	6551853	A3SS	0.5	50	50	ENSMUST00000002176.13	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6558793	6565482	-	6558775	6565482	A3SS	0.5	50	50	ENSMUST00000002176.13	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	7399203	7400669	-	7190321	7400669	A3SS	0.5	50	50	ENSMUST00000002176.13	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6558775	6559091	-	6558775	6565482	A5SS	0.33	50	50	ENSMUST00000002176.13	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6558775	6565470	-	6558775	6565482	A5SS	0.33	50	50	ENSMUST00000002176.13	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6590919	6597305	-	6590919	6604845	A5SS	0.5	50	50	ENSMUST00000002176.13	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6620633	6620814	-	6620633	6629482	A5SS	0.5	50	50	ENSMUST00000002176.13	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6726424	6726590	-	6726424	6967190	A5SS	0.14	50	50	ENSMUST00000002176.13	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6726424	6726848	-	6726424	6967190	A5SS	0.14	50	50	ENSMUST00000002176.13	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6726424	6876678	-	6726424	6967190	A5SS	0.14	50	50	ENSMUST00000002176.13	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6726424	6877167	-	6726424	6967190	A5SS	0.14	50	50	ENSMUST00000002176.13	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6726424	6889178	-	6726424	6967190	A5SS	0.14	50	50	ENSMUST00000002176.13	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6726424	6889663	-	6726424	6967190	A5SS	0.14	50	50	ENSMUST00000002176.13	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6967225	7085918	-	6967225	7190283	A5SS	0.5	50	50	ENSMUST00000002176.13	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6669008	6967190	-	6669008	6726228	5pMXE	0.5	50	50	ENSMUST00000100429.11	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6726424	6726590	-	6726424	6889663	A5SS	0.14	50	50	ENSMUST00000170438.8	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6726424	6726848	-	6726424	6889663	A5SS	0.14	50	50	ENSMUST00000170438.8	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6726424	6876678	-	6726424	6889663	A5SS	0.14	50	50	ENSMUST00000170438.8	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6726424	6877167	-	6726424	6889663	A5SS	0.14	50	50	ENSMUST00000170438.8	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6726424	6889178	-	6726424	6889663	A5SS	0.14	50	50	ENSMUST00000170438.8	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6558775;6559131	6559091;6565470	-	6558775	6565470	cassetteExon	0.5	100	100	ENSMUST00000182879.8	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6726424	6726848	-	6726424	6726590	5pMXE	0.14	50	50	ENSMUST00000114927.9	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6726424	6876678	-	6726424	6726590	5pMXE	0.14	50	50	ENSMUST00000114927.9	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6726424	6877167	-	6726424	6726590	5pMXE	0.14	50	50	ENSMUST00000114927.9	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6726424	6889178	-	6726424	6726590	5pMXE	0.14	50	50	ENSMUST00000114927.9	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6726424	6889178	-	6726424	6877167	5pMXE	0.14	50	50	ENSMUST00000183984.8	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6726424	6726848	-	6726424	6877167	A5SS	0.14	50	50	ENSMUST00000183984.8	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6726424	6876678	-	6726424	6877167	A5SS	0.14	50	50	ENSMUST00000183984.8	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6726424	6726848	-	6726424	6889178	A5SS	0.14	50	50	ENSMUST00000138347.9	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6726424	6876678	-	6726424	6889178	A5SS	0.14	50	50	ENSMUST00000138347.9	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	7400733	7435082	-	7400733	7400943	5pMXE	0.5	50	50	ENSMUST00000137733.9	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	6726424	6726848	-	6726424	6876678	A5SS	0.14	50	50	ENSMUST00000123142.3	ENSMUSG00000002107.19	Celf2	chr2	protein_coding	CUGBP, Elav-like family member 2
chr2	9357365	9414520	+	9357365;9377327	9377214;9414520	ES	0.5	50	50	ENSMUST00000152599.8	ENSMUSG00000079604.10	Gm13219	chr2	lncRNA	predicted gene 13219
chr2	9882795	9892402	-	9882795	9883216	5pMXE	0.33	50	50	ENSMUST00000102976.4	ENSMUSG00000015619.11	Gata3	chr2	protein_coding	GATA binding protein 3
chr2	9882795	9894628	-	9882795	9883216	5pMXE	0.33	50	50	ENSMUST00000102976.4	ENSMUSG00000015619.11	Gata3	chr2	protein_coding	GATA binding protein 3
chr2	9873717	9878425	-	9873717	9879200	A5SS	0.5	50	50	ENSMUST00000102976.4	ENSMUSG00000015619.11	Gata3	chr2	protein_coding	GATA binding protein 3
chr2	9879736	9879919	-	9879736	9882163	A5SS	0.5	50	50	ENSMUST00000102976.4	ENSMUSG00000015619.11	Gata3	chr2	protein_coding	GATA binding protein 3
chr2	9882795	9894628	-	9882394	9894628	A3SS	0.5	50	50	ENSMUST00000130615.2	ENSMUSG00000015619.11	Gata3	chr2	protein_coding	GATA binding protein 3
chr2	9882795	9894628	-	9882795	9892402	5pMXE	0.33	50	50	ENSMUST00000147533.2	ENSMUSG00000015619.11	Gata3	chr2	protein_coding	GATA binding protein 3
chr2	9888606	9892402	-	9882795	9892402	A3SS	0.5	50	50	ENSMUST00000147533.2	ENSMUSG00000015619.11	Gata3	chr2	protein_coding	GATA binding protein 3
chr2	9923020	9923561	-	9923020	9925863	A5SS	0.5	50	50	ENSMUST00000026888.11	ENSMUSG00000025782.13	Taf3	chr2	protein_coding	TATA-box binding protein associated factor 3
chr2	10060972;10061617	10061581;10063807	-	10060972	10063807	cassetteExon	0.5	100	100	ENSMUST00000026887.14	ENSMUSG00000025781.15	Atp5c1	chr2	protein_coding	ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
chr2	10074538	10084431	-	10074538	10085159	A5SS	0.16	50	50	ENSMUST00000026887.14	ENSMUSG00000025781.15	Atp5c1	chr2	protein_coding	ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
chr2	10074538	10084497	-	10074538	10085159	A5SS	0.16	50	50	ENSMUST00000026887.14	ENSMUSG00000025781.15	Atp5c1	chr2	protein_coding	ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
chr2	10074538	10084524	-	10074538	10085159	A5SS	0.16	50	50	ENSMUST00000026887.14	ENSMUSG00000025781.15	Atp5c1	chr2	protein_coding	ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
chr2	10074538	10084715	-	10074538	10085159	A5SS	0.16	50	50	ENSMUST00000026887.14	ENSMUSG00000025781.15	Atp5c1	chr2	protein_coding	ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
chr2	10074538	10084831	-	10074538	10085159	A5SS	0.16	50	50	ENSMUST00000026887.14	ENSMUSG00000025781.15	Atp5c1	chr2	protein_coding	ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
chr2	10074538	10084431	-	10074538	10084524	A5SS	0.16	50	50	ENSMUST00000114896.8	ENSMUSG00000025781.15	Atp5c1	chr2	protein_coding	ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
chr2	10074538	10084497	-	10074538	10084524	A5SS	0.16	50	50	ENSMUST00000114896.8	ENSMUSG00000025781.15	Atp5c1	chr2	protein_coding	ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
chr2	10074538	10084715	-	10074538	10084524	A5SS	0.16	50	50	ENSMUST00000114896.8	ENSMUSG00000025781.15	Atp5c1	chr2	protein_coding	ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
chr2	10074538	10084831	-	10074538	10084524	A5SS	0.16	50	50	ENSMUST00000114896.8	ENSMUSG00000025781.15	Atp5c1	chr2	protein_coding	ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
chr2	10074538	10084431	-	10074538	10084715	A5SS	0.16	50	50	ENSMUST00000145530.8	ENSMUSG00000025781.15	Atp5c1	chr2	protein_coding	ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
chr2	10074538	10084497	-	10074538	10084715	A5SS	0.16	50	50	ENSMUST00000145530.8	ENSMUSG00000025781.15	Atp5c1	chr2	protein_coding	ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
chr2	10074538	10084831	-	10074538	10084715	A5SS	0.16	50	50	ENSMUST00000145530.8	ENSMUSG00000025781.15	Atp5c1	chr2	protein_coding	ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
chr2	10074538	10084831	-	10074538	10084431	5pMXE	0.16	50	50	ENSMUST00000153554.8	ENSMUSG00000025781.15	Atp5c1	chr2	protein_coding	ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
chr2	10074538	10084497	-	10074538	10084431	A5SS	0.16	50	50	ENSMUST00000153554.8	ENSMUSG00000025781.15	Atp5c1	chr2	protein_coding	ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
chr2	10074538	10084497	-	10074538	10084831	A5SS	0.16	50	50	ENSMUST00000139810.8	ENSMUSG00000025781.15	Atp5c1	chr2	protein_coding	ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
chr2	10095174;10095685	10095568;10096529	+	10095174	10096529	cassetteExon	0.5	100	100	ENSMUST00000142599.2	ENSMUSG00000037262.8	Kin	chr2	protein_coding	Kin17 DNA and RNA binding protein
chr2	10113750	10114292	-	10111645	10114292	A3SS	0.5	50	50	ENSMUST00000042290.14	ENSMUSG00000037254.19	Itih2	chr2	protein_coding	inter-alpha trypsin inhibitor, heavy chain 2
chr2	10135462	10136135	-	10135462	10135812	5pMXE	0.5	50	50	ENSMUST00000155809.9	ENSMUSG00000037254.19	Itih2	chr2	protein_coding	inter-alpha trypsin inhibitor, heavy chain 2
chr2	10375363;10376270	10376220;10384996	+	10375363	10384996	cassetteExon	0.5	100	100	ENSMUST00000114862.8	ENSMUSG00000061186.16	Sfmbt2	chr2	protein_coding	Scm-like with four mbt domains 2
chr2	10385046;10385877	10385834;10398076	+	10385046	10398076	cassetteExon	0.5	100	100	ENSMUST00000114862.8	ENSMUSG00000061186.16	Sfmbt2	chr2	protein_coding	Scm-like with four mbt domains 2
chr2	10377427	10384996	+	10375363	10384996	A5SS	0.33	50	50	ENSMUST00000114862.8	ENSMUSG00000061186.16	Sfmbt2	chr2	protein_coding	Scm-like with four mbt domains 2
chr2	10377427	10384996	+	10376270	10384996	A5SS	0.33	50	50	ENSMUST00000114861.8	ENSMUSG00000061186.16	Sfmbt2	chr2	protein_coding	Scm-like with four mbt domains 2
chr2	10580322;10582438	10582340;10582626	+	10580322	10582626	cassetteExon	0.5	100	100	ENSMUST00000116594.9	ENSMUSG00000061186.16	Sfmbt2	chr2	protein_coding	Scm-like with four mbt domains 2
chr2	11288695	11304106	+	11288695;11295388	11295200;11304106	ES	0.5	50	50	ENSMUST00000028118.9	ENSMUSG00000026778.14	Prkcq	chr2	protein_coding	protein kinase C, theta
chr2	11255630	11257880	+	11253141	11257880	A5SS	0.5	50	50	ENSMUST00000028118.9	ENSMUSG00000026778.14	Prkcq	chr2	protein_coding	protein kinase C, theta
chr2	11479354	11486682	-	11479354;11485182	11485009;11486682	ES	0.33	50	50	ENSMUST00000192949.6	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11485182	11486865	-	11485182;11486746	11486682;11486865	ES	0.5	50	50	ENSMUST00000192949.6	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11479354;11482869	11482847;11485009	-	11479354	11485009	cassetteExon	0.5	100	100	ENSMUST00000192949.6	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11485182;11486144	11486058;11486682	-	11485182	11486682	cassetteExon	0.5	100	100	ENSMUST00000192949.6	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11491202	11493537	-	11491154	11493537	A3SS	0.5	50	50	ENSMUST00000192949.6	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11479354	11480565	-	11479354	11485009	A5SS	0.25	50	50	ENSMUST00000192949.6	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11498839	11502670	-	11498839	11558638	A5SS	0.16	50	50	ENSMUST00000192949.6	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11498839	11503145	-	11498839	11558638	A5SS	0.16	50	50	ENSMUST00000192949.6	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11498839	11505429	-	11498839	11558638	A5SS	0.16	50	50	ENSMUST00000192949.6	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11498839	11505640	-	11498839	11558638	A5SS	0.16	50	50	ENSMUST00000192949.6	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11498839	11506436	-	11498839	11558638	A5SS	0.16	50	50	ENSMUST00000192949.6	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11498839;11505788	11505429;11506436	-	11498839	11506436	cassetteExon	0.5	100	100	ENSMUST00000179584.8	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11498839;11505788	11505640;11506436	-	11498839	11506436	cassetteExon	0.5	100	100	ENSMUST00000179584.8	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11498839	11502670	-	11498839	11506436	A5SS	0.16	50	50	ENSMUST00000179584.8	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11498839	11503145	-	11498839	11506436	A5SS	0.16	50	50	ENSMUST00000179584.8	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11479354	11482847	-	11479354;11480617	11480565;11482847	ES	0.5	50	50	ENSMUST00000028114.13	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11479354;11486746	11486682;11486865	-	11479354;11485182	11485009;11486865	MXE	0.5	100	100	ENSMUST00000195779.6	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11488844	11489016	-	11486927	11489016	A3SS	0.5	50	50	ENSMUST00000195779.6	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11485182	11486058	-	11485182	11486865	A5SS	0.33	50	50	ENSMUST00000195779.6	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11486927	11487256	-	11486927	11489016	A5SS	0.5	50	50	ENSMUST00000195779.6	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11498839	11505429	-	11498839	11503145	5pMXE	0.16	50	50	ENSMUST00000150086.7	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11498839	11505640	-	11498839	11503145	5pMXE	0.16	50	50	ENSMUST00000150086.7	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11498839	11502670	-	11498839	11503145	A5SS	0.16	50	50	ENSMUST00000150086.7	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11486144	11486682	-	11479354	11486682	A3SS	0.33	50	50	ENSMUST00000183869.8	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11479354	11480565	-	11479354	11486682	A5SS	0.25	50	50	ENSMUST00000183869.8	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11479354	11482847	-	11479354	11486682	A5SS	0.25	50	50	ENSMUST00000183869.8	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11479354	11482847	-	11480617	11482847	3pMXE	0.5	50	50	ENSMUST00000114845.10	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11479354	11485009	-	11482869	11485009	3pMXE	0.5	50	50	ENSMUST00000114844.8	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11479354	11486682	-	11485182	11486682	3pMXE	0.33	50	50	ENSMUST00000192844.6	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11485182	11486682	-	11486144	11486682	3pMXE	0.33	50	50	ENSMUST00000191726.2	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11498839	11502670	-	11498839	11505640	A5SS	0.2	50	50	ENSMUST00000192827.6	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11498839	11505429	-	11498839	11505640	A5SS	0.2	50	50	ENSMUST00000192827.6	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11498839	11505429	-	11498839	11502670	5pMXE	0.16	50	50	ENSMUST00000140580.8	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11498839	11506436	-	11498839	11505640	5pMXE	0.16	50	50	ENSMUST00000144921.3	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11498839	11506436	-	11498839	11505429	5pMXE	0.16	50	50	ENSMUST00000145970.3	ENSMUSG00000026773.20	Pfkfb3	chr2	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr2	11605567	11608817	-	11605567	11607896	5pMXE	0.5	50	50	ENSMUST00000040314.12	ENSMUSG00000037197.12	Rbm17	chr2	protein_coding	RNA binding motif protein 17
chr2	11647875	11652783	+	11647875	11679106	A3SS	0.5	50	50	ENSMUST00000028111.6	ENSMUSG00000026770.6	Il2ra	chr2	protein_coding	interleukin 2 receptor, alpha chain
chr2	11724916	11728907	+	11724916;11728421	11728224;11728907	ES	0.33	50	50	ENSMUST00000138349.8	ENSMUSG00000023206.17	Il15ra	chr2	protein_coding	interleukin 15 receptor, alpha chain
chr2	11728939;11732644	11732574;11735382	+	11728939	11735382	cassetteExon	0.5	100	100	ENSMUST00000138349.8	ENSMUSG00000023206.17	Il15ra	chr2	protein_coding	interleukin 15 receptor, alpha chain
chr2	11724916	11728323	+	11724916	11728224	A3SS	0.33	50	50	ENSMUST00000138349.8	ENSMUSG00000023206.17	Il15ra	chr2	protein_coding	interleukin 15 receptor, alpha chain
chr2	11710755	11723075	+	11710389	11723075	A5SS	0.5	50	50	ENSMUST00000138349.8	ENSMUSG00000023206.17	Il15ra	chr2	protein_coding	interleukin 15 receptor, alpha chain
chr2	11723269	11724824	+	11723153	11724824	A5SS	0.5	50	50	ENSMUST00000138349.8	ENSMUSG00000023206.17	Il15ra	chr2	protein_coding	interleukin 15 receptor, alpha chain
chr2	11723269	11728224	+	11724916	11728224	A5SS&ES	0.5	50	50	ENSMUST00000138349.8	ENSMUSG00000023206.17	Il15ra	chr2	protein_coding	interleukin 15 receptor, alpha chain
chr2	11723269	11728907	+	11728421	11728907	A5SS&ES	0.33	50	50	ENSMUST00000138349.8	ENSMUSG00000023206.17	Il15ra	chr2	protein_coding	interleukin 15 receptor, alpha chain
chr2	11723269	11735382	+	11728939	11735382	A5SS&ES	0.33	50	50	ENSMUST00000138349.8	ENSMUSG00000023206.17	Il15ra	chr2	protein_coding	interleukin 15 receptor, alpha chain
chr2	11723269	11737961	+	11735457	11737961	A5SS&ES	0.5	50	50	ENSMUST00000138349.8	ENSMUSG00000023206.17	Il15ra	chr2	protein_coding	interleukin 15 receptor, alpha chain
chr2	11723269;11735457	11735382;11737961	+	11723269	11737961	cassetteExon	0.5	100	100	ENSMUST00000091456.12	ENSMUSG00000023206.17	Il15ra	chr2	protein_coding	interleukin 15 receptor, alpha chain
chr2	11723269	11724824	+	11723269	11737961	A3SS	0.2	50	50	ENSMUST00000091456.12	ENSMUSG00000023206.17	Il15ra	chr2	protein_coding	interleukin 15 receptor, alpha chain
chr2	11723269	11728224	+	11723269	11737961	A3SS	0.2	50	50	ENSMUST00000091456.12	ENSMUSG00000023206.17	Il15ra	chr2	protein_coding	interleukin 15 receptor, alpha chain
chr2	11723269	11728907	+	11723269	11737961	A3SS	0.2	50	50	ENSMUST00000091456.12	ENSMUSG00000023206.17	Il15ra	chr2	protein_coding	interleukin 15 receptor, alpha chain
chr2	11723269	11728907	+	11723269;11728421	11728224;11728907	ES	0.33	50	50	ENSMUST00000135341.8	ENSMUSG00000023206.17	Il15ra	chr2	protein_coding	interleukin 15 receptor, alpha chain
chr2	11723269;11724916	11724824;11728224	+	11723269	11728224	cassetteExon	0.5	100	100	ENSMUST00000135341.8	ENSMUSG00000023206.17	Il15ra	chr2	protein_coding	interleukin 15 receptor, alpha chain
chr2	11723269;11724916	11724824;11728907	+	11723269;11728421	11728224;11728907	MXE	0.5	100	100	ENSMUST00000135341.8	ENSMUSG00000023206.17	Il15ra	chr2	protein_coding	interleukin 15 receptor, alpha chain
chr2	11723269	11728907	+	11723269;11724916	11724824;11728907	ES	0.33	50	50	ENSMUST00000191662.6	ENSMUSG00000023206.17	Il15ra	chr2	protein_coding	interleukin 15 receptor, alpha chain
chr2	11724916;11728421	11728323;11728907	+	11724916	11728907	cassetteExon	0.5	100	100	ENSMUST00000191662.6	ENSMUSG00000023206.17	Il15ra	chr2	protein_coding	interleukin 15 receptor, alpha chain
chr2	11723269	11735382	+	11723269;11728939	11728907;11735382	ES	0.33	50	50	ENSMUST00000126394.8	ENSMUSG00000023206.17	Il15ra	chr2	protein_coding	interleukin 15 receptor, alpha chain
chr2	11723269	11728224	+	11723269	11724824	A3SS&ES	0.2	50	50	ENSMUST00000114831.9	ENSMUSG00000023206.17	Il15ra	chr2	protein_coding	interleukin 15 receptor, alpha chain
chr2	11723269	11724824	+	11723269	11735382	A3SS	0.2	50	50	ENSMUST00000114832.3	ENSMUSG00000023206.17	Il15ra	chr2	protein_coding	interleukin 15 receptor, alpha chain
chr2	11723269	11728224	+	11723269	11735382	A3SS	0.2	50	50	ENSMUST00000114832.3	ENSMUSG00000023206.17	Il15ra	chr2	protein_coding	interleukin 15 receptor, alpha chain
chr2	11732644	11735382	+	11723269	11735382	A5SS	0.33	50	50	ENSMUST00000114832.3	ENSMUSG00000023206.17	Il15ra	chr2	protein_coding	interleukin 15 receptor, alpha chain
chr2	11723269	11728907	+	11723269	11724824	3pMXE	0.2	50	50	ENSMUST00000133975.2	ENSMUSG00000023206.17	Il15ra	chr2	protein_coding	interleukin 15 receptor, alpha chain
chr2	11724916	11728907	+	11728421	11728907	5pMXE	0.33	50	50	ENSMUST00000139774.3	ENSMUSG00000023206.17	Il15ra	chr2	protein_coding	interleukin 15 receptor, alpha chain
chr2	11760588	11761413	-	11760588;11761314	11761228;11761413	ES	0.5	50	50	ENSMUST00000071564.14	ENSMUSG00000058594.16	Fbh1	chr2	protein_coding	F-box DNA helicase 1
chr2	11772522	11774561	-	11772522	11774587	A5SS	0.5	50	50	ENSMUST00000071564.14	ENSMUSG00000058594.16	Fbh1	chr2	protein_coding	F-box DNA helicase 1
chr2	11774742	11781880	-	11774742	11782243	A5SS	0.33	50	50	ENSMUST00000071564.14	ENSMUSG00000058594.16	Fbh1	chr2	protein_coding	F-box DNA helicase 1
chr2	11774742	11782215	-	11774742	11782243	A5SS	0.33	50	50	ENSMUST00000071564.14	ENSMUSG00000058594.16	Fbh1	chr2	protein_coding	F-box DNA helicase 1
chr2	11769044	11782243	-	11769044	11771933	A5SS&ES	0.5	50	50	ENSMUST00000123717.8	ENSMUSG00000058594.16	Fbh1	chr2	protein_coding	F-box DNA helicase 1
chr2	11774742	11782215	-	11774742	11781880	A5SS	0.33	50	50	ENSMUST00000123717.8	ENSMUSG00000058594.16	Fbh1	chr2	protein_coding	F-box DNA helicase 1
chr2	11774742	11782243	-	11769044	11782243	A3SS	0.5	50	50	ENSMUST00000192171.2	ENSMUSG00000058594.16	Fbh1	chr2	protein_coding	F-box DNA helicase 1
chr2	11789263;11790071	11789934;11791035	+	11789263	11791035	cassetteExon	0.5	100	100	ENSMUST00000056108.12	ENSMUSG00000047909.12	Ankrd16	chr2	protein_coding	ankyrin repeat domain 16
chr2	11789263;11790071	11789981;11791035	+	11789263	11791035	cassetteExon	0.5	100	100	ENSMUST00000056108.12	ENSMUSG00000047909.12	Ankrd16	chr2	protein_coding	ankyrin repeat domain 16
chr2	11791113;11792382	11792216;11794545	+	11791113	11794545	cassetteExon	0.5	100	100	ENSMUST00000056108.12	ENSMUSG00000047909.12	Ankrd16	chr2	protein_coding	ankyrin repeat domain 16
chr2	11784634	11786288	+	11784708	11786288	A5SS	0.5	50	50	ENSMUST00000056108.12	ENSMUSG00000047909.12	Ankrd16	chr2	protein_coding	ankyrin repeat domain 16
chr2	11786344	11788452	+	11786330	11788452	A5SS	0.5	50	50	ENSMUST00000056108.12	ENSMUSG00000047909.12	Ankrd16	chr2	protein_coding	ankyrin repeat domain 16
chr2	11788567	11789102	+	11788560	11789102	A5SS	0.5	50	50	ENSMUST00000056108.12	ENSMUSG00000047909.12	Ankrd16	chr2	protein_coding	ankyrin repeat domain 16
chr2	11789263	11789981	+	11789263	11789934	A3SS	0.33	50	50	ENSMUST00000133664.8	ENSMUSG00000047909.12	Ankrd16	chr2	protein_coding	ankyrin repeat domain 16
chr2	12196654;12198093	12198081;12198223	-	12196654	12198223	cassetteExon	0.5	100	100	ENSMUST00000028106.11	ENSMUSG00000026768.11	Itga8	chr2	protein_coding	integrin alpha 8
chr2	12114032	12115786	-	12114012	12115786	A3SS	0.5	50	50	ENSMUST00000028106.11	ENSMUSG00000026768.11	Itga8	chr2	protein_coding	integrin alpha 8
chr2	12224899	12234861	-	12209587	12234861	A3SS	0.5	50	50	ENSMUST00000028106.11	ENSMUSG00000026768.11	Itga8	chr2	protein_coding	integrin alpha 8
chr2	12292513	12305649	-	12270144	12305649	A3SS	0.5	50	50	ENSMUST00000028106.11	ENSMUSG00000026768.11	Itga8	chr2	protein_coding	integrin alpha 8
chr2	12196654	12198223	-	12196654	12198081	5pMXE	0.5	50	50	ENSMUST00000129370.2	ENSMUSG00000026768.11	Itga8	chr2	protein_coding	integrin alpha 8
chr2	12306400	12314698	+	12307096	12314698	A5SS	0.5	50	50	ENSMUST00000148089.3	ENSMUSG00000086843.4	E030013I19Rik	chr2	lncRNA	RIKEN cDNA E030013I19 gene
chr2	12353014	12360088	-	12353014;12355811	12355740;12360088	ES	0.5	50	50	ENSMUST00000155530.8	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12404948	12410671	-	12404948;12408979	12408809;12410671	ES	0.16	50	50	ENSMUST00000155530.8	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12353014;12354653	12354518;12355740	-	12353014	12355740	cassetteExon	0.5	100	100	ENSMUST00000155530.8	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12404948;12405887	12405836;12408809	-	12404948	12408809	cassetteExon	0.5	100	100	ENSMUST00000155530.8	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12404948;12405887	12405836;12410671	-	12404948;12408979	12408809;12410671	MXE	0.5	100	100	ENSMUST00000155530.8	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12414891;12416121	12416064;12423970	-	12414891	12423970	cassetteExon	0.5	100	100	ENSMUST00000155530.8	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12408977	12410671	-	12408979	12410671	A3SS	0.16	50	50	ENSMUST00000155530.8	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12360175	12361712	-	12360175	12361716	A5SS	0.5	50	50	ENSMUST00000155530.8	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12408979	12409249	-	12408979	12410671	A5SS	0.33	50	50	ENSMUST00000155530.8	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12405887	12410671	-	12405887;12408977	12408809;12410671	ES	0.16	50	50	ENSMUST00000129489.8	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12408979	12423970	-	12414891	12423970	A3SS&ES	0.2	50	50	ENSMUST00000129489.8	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12402377;12404948	12404834;12410671	-	12402377	12410671	cassetteExon	0.5	100	100	ENSMUST00000154899.7	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12405887	12410671	-	12402377	12410671	A3SS	0.16	50	50	ENSMUST00000154899.7	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12408977	12410671	-	12402377	12410671	A3SS	0.16	50	50	ENSMUST00000154899.7	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12408979	12410671	-	12402377	12410671	A3SS	0.16	50	50	ENSMUST00000154899.7	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12408979	12423970	-	12402377	12423970	A3SS	0.2	50	50	ENSMUST00000194533.6	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12414891	12423970	-	12402377	12423970	A3SS	0.2	50	50	ENSMUST00000194533.6	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12416121	12423970	-	12402377	12423970	A3SS	0.2	50	50	ENSMUST00000194533.6	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12391490	12410671	-	12391490	12400990	A5SS&ES	0.33	50	50	ENSMUST00000194533.6	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12402377	12404834	-	12402377	12423970	A5SS	0.33	50	50	ENSMUST00000194533.6	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12402377	12410671	-	12402377	12423970	A5SS	0.33	50	50	ENSMUST00000194533.6	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12405887	12410671	-	12405887;12408979	12408809;12410671	ES	0.16	50	50	ENSMUST00000028105.13	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12404948;12405887	12405836;12410671	-	12404948	12410671	cassetteExon	0.5	100	100	ENSMUST00000144645.8	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12404948;12408977	12408809;12410671	-	12404948	12410671	cassetteExon	0.5	100	100	ENSMUST00000144645.8	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12404948;12408979	12408809;12423970	-	12404948;12414891	12410671;12423970	MXE	0.5	100	100	ENSMUST00000144645.8	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12353014	12354518	-	12353014	12360088	A5SS	0.33	50	50	ENSMUST00000144645.8	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12353014	12360088	-	12355811	12360088	3pMXE	0.5	50	50	ENSMUST00000124603.8	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12402377	12410671	-	12391490	12410671	A3SS	0.16	50	50	ENSMUST00000124603.8	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12404948	12410671	-	12391490	12410671	A3SS	0.16	50	50	ENSMUST00000124603.8	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12405887	12410671	-	12391490	12410671	A3SS	0.16	50	50	ENSMUST00000124603.8	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12408977	12410671	-	12391490	12410671	A3SS	0.16	50	50	ENSMUST00000124603.8	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12408979	12410671	-	12391490	12410671	A3SS	0.16	50	50	ENSMUST00000124603.8	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12402377	12423970	-	12391490	12423970	A3SS	0.2	50	50	ENSMUST00000129993.3	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12408979	12423970	-	12391490	12423970	A3SS	0.2	50	50	ENSMUST00000129993.3	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12414891	12423970	-	12391490	12423970	A3SS	0.2	50	50	ENSMUST00000129993.3	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12416121	12423970	-	12391490	12423970	A3SS	0.2	50	50	ENSMUST00000129993.3	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12391490	12400990	-	12391490	12423970	A5SS	0.33	50	50	ENSMUST00000129993.3	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12391490	12410671	-	12391490	12423970	A5SS	0.33	50	50	ENSMUST00000129993.3	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12404948;12408977	12408809;12410671	-	12404948;12405887	12405836;12410671	MXE	0.5	100	100	ENSMUST00000129348.2	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12404948	12408809	-	12405887	12408809	3pMXE	0.5	50	50	ENSMUST00000124515.2	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12416121	12423970	-	12408979	12423970	A3SS	0.33	50	50	ENSMUST00000124515.2	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12405887	12410671	-	12405887	12408809	A5SS&ES	0.5	50	50	ENSMUST00000124515.2	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12408979	12409249	-	12408979	12423970	A5SS	0.33	50	50	ENSMUST00000124515.2	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12408979	12410671	-	12408979	12423970	A5SS	0.33	50	50	ENSMUST00000124515.2	ENSMUSG00000026767.13	Mindy3	chr2	protein_coding	MINDY lysine 48 deubiquitinase 3
chr2	12929009	12982971	+	12929009;12979264	12979180;12982971	ES	0.5	50	50	ENSMUST00000154269.7	ENSMUSG00000026730.13	Pter	chr2	protein_coding	phosphotriesterase related
chr2	12985369	13005668	+	12985369;12999701	12999561;13005668	ES	0.33	50	50	ENSMUST00000154269.7	ENSMUSG00000026730.13	Pter	chr2	protein_coding	phosphotriesterase related
chr2	12985369	12985969	+	12985369	12999561	A3SS	0.33	50	50	ENSMUST00000154269.7	ENSMUSG00000026730.13	Pter	chr2	protein_coding	phosphotriesterase related
chr2	12983224	12985104	+	12983428	12985104	A5SS	0.33	50	50	ENSMUST00000154269.7	ENSMUSG00000026730.13	Pter	chr2	protein_coding	phosphotriesterase related
chr2	12999631	13005668	+	12999701	13005668	A5SS	0.33	50	50	ENSMUST00000154269.7	ENSMUSG00000026730.13	Pter	chr2	protein_coding	phosphotriesterase related
chr2	12929009;12983224	12982971;12985104	+	12929009	12985104	cassetteExon	0.5	100	100	ENSMUST00000150283.2	ENSMUSG00000026730.13	Pter	chr2	protein_coding	phosphotriesterase related
chr2	12929009;12983428	12982971;12985104	+	12929009	12985104	cassetteExon	0.5	100	100	ENSMUST00000150283.2	ENSMUSG00000026730.13	Pter	chr2	protein_coding	phosphotriesterase related
chr2	12929009	12979180	+	12929009	12985104	A3SS	0.33	50	50	ENSMUST00000150283.2	ENSMUSG00000026730.13	Pter	chr2	protein_coding	phosphotriesterase related
chr2	12985369	13005668	+	12985369;12999631	12999561;13005668	ES	0.33	50	50	ENSMUST00000028063.7	ENSMUSG00000026730.13	Pter	chr2	protein_coding	phosphotriesterase related
chr2	12985369	13005668	+	12985369	12985969	3pMXE	0.33	50	50	ENSMUST00000193742.6	ENSMUSG00000026730.13	Pter	chr2	protein_coding	phosphotriesterase related
chr2	12929009	12985104	+	12983428	12985104	5pMXE	0.33	50	50	ENSMUST00000195521.2	ENSMUSG00000026730.13	Pter	chr2	protein_coding	phosphotriesterase related
chr2	13229236;13246606	13246556;13275722	-	13229236	13275722	cassetteExon	0.5	100	100	ENSMUST00000114791.9	ENSMUSG00000026727.11	Rsu1	chr2	protein_coding	Ras suppressor protein 1
chr2	13223971	13229116	-	13223938	13229116	A3SS	0.5	50	50	ENSMUST00000114791.9	ENSMUSG00000026727.11	Rsu1	chr2	protein_coding	Ras suppressor protein 1
chr2	13248901	13275722	-	13229236	13275722	A3SS	0.25	50	50	ENSMUST00000114791.9	ENSMUSG00000026727.11	Rsu1	chr2	protein_coding	Ras suppressor protein 1
chr2	13229236	13229362	-	13229236	13275722	A5SS	0.33	50	50	ENSMUST00000114791.9	ENSMUSG00000026727.11	Rsu1	chr2	protein_coding	Ras suppressor protein 1
chr2	13229236;13229462	13229362;13246556	-	13229236	13246556	cassetteExon	0.5	100	100	ENSMUST00000028059.9	ENSMUSG00000026727.11	Rsu1	chr2	protein_coding	Ras suppressor protein 1
chr2	13246606;13248901	13248812;13275722	-	13246606	13275722	cassetteExon	0.5	100	100	ENSMUST00000028059.9	ENSMUSG00000026727.11	Rsu1	chr2	protein_coding	Ras suppressor protein 1
chr2	13229236	13275722	-	13082418	13275722	A3SS	0.25	50	50	ENSMUST00000191959.6	ENSMUSG00000026727.11	Rsu1	chr2	protein_coding	Ras suppressor protein 1
chr2	13246606	13275722	-	13082418	13275722	A3SS	0.25	50	50	ENSMUST00000191959.6	ENSMUSG00000026727.11	Rsu1	chr2	protein_coding	Ras suppressor protein 1
chr2	13248901	13275722	-	13082418	13275722	A3SS	0.25	50	50	ENSMUST00000191959.6	ENSMUSG00000026727.11	Rsu1	chr2	protein_coding	Ras suppressor protein 1
chr2	13082418	13174809	-	13082418	13275722	A5SS	0.5	50	50	ENSMUST00000191959.6	ENSMUSG00000026727.11	Rsu1	chr2	protein_coding	Ras suppressor protein 1
chr2	13461503	13463757	-	13461578	13463757	A3SS	0.5	50	50	ENSMUST00000091436.7	ENSMUSG00000026726.11	Cubn	chr2	protein_coding	cubilin (intrinsic factor-cobalamin receptor)
chr2	13530505	13549380	-	13530505;13538304	13538195;13549380	ES	0.5	50	50	ENSMUST00000124488.7	ENSMUSG00000026723.11	Trdmt1	chr2	protein_coding	tRNA aspartic acid methyltransferase 1
chr2	13528308;13529808	13529762;13530429	-	13528308	13530429	cassetteExon	0.5	100	100	ENSMUST00000124488.7	ENSMUSG00000026723.11	Trdmt1	chr2	protein_coding	tRNA aspartic acid methyltransferase 1
chr2	13585494	13587284	+	13585494;13586509	13586424;13587284	ES	0.5	50	50	ENSMUST00000028062.8	ENSMUSG00000026728.10	Vim	chr2	protein_coding	vimentin
chr2	13797663	13798059	-	13797663	13798155	A5SS	0.5	50	50	ENSMUST00000003509.10	ENSMUSG00000003418.12	St8sia6	chr2	protein_coding	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6
chr2	14040768;14045766	14045645;14049594	-	14040768	14049594	cassetteExon	0.5	100	100	ENSMUST00000131730.7	ENSMUSG00000063275.16	Hacd1	chr2	protein_coding	3-hydroxyacyl-CoA dehydratase 1
chr2	14079147	14120628	+	14079147;14107296	14107212;14120628	ES	0.5	50	50	ENSMUST00000102960.11	ENSMUSG00000026718.18	Stam	chr2	protein_coding	signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
chr2	14135929;14138519	14138454;14139164	+	14135929	14139164	cassetteExon	0.5	100	100	ENSMUST00000102960.11	ENSMUSG00000026718.18	Stam	chr2	protein_coding	signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
chr2	14135929	14136036	+	14135929	14139164	A3SS	0.33	50	50	ENSMUST00000102960.11	ENSMUSG00000026718.18	Stam	chr2	protein_coding	signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
chr2	14079358	14107212	+	14079147	14107212	A5SS	0.5	50	50	ENSMUST00000102960.11	ENSMUSG00000026718.18	Stam	chr2	protein_coding	signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
chr2	14135686	14135835	+	14133982	14135835	A5SS	0.5	50	50	ENSMUST00000102960.11	ENSMUSG00000026718.18	Stam	chr2	protein_coding	signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
chr2	14079147;14107296	14107212;14122200	+	14079147;14120884	14120628;14122200	MXE	0.5	100	100	ENSMUST00000156901.2	ENSMUSG00000026718.18	Stam	chr2	protein_coding	signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
chr2	14107296;14120884	14120628;14122200	+	14107296	14122200	cassetteExon	0.5	100	100	ENSMUST00000193636.6	ENSMUSG00000026718.18	Stam	chr2	protein_coding	signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
chr2	14135929	14138454	+	14135929	14136036	3pMXE	0.33	50	50	ENSMUST00000144944.8	ENSMUSG00000026718.18	Stam	chr2	protein_coding	signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
chr2	14439166;14440577	14440470;14448823	+	14439166	14448823	cassetteExon	0.5	100	100	ENSMUST00000114731.8	ENSMUSG00000036949.17	Slc39a12	chr2	protein_coding	solute carrier family 39 (zinc transporter), member 12
chr2	14393562	14394055	+	14393309	14394055	A5SS	0.5	50	50	ENSMUST00000114731.8	ENSMUSG00000036949.17	Slc39a12	chr2	protein_coding	solute carrier family 39 (zinc transporter), member 12
chr2	14521714;14537161	14537100;14540297	+	14521714	14540297	cassetteExon	0.5	100	100	ENSMUST00000192745.6	ENSMUSG00000084901.7	Gm13266	chr2	lncRNA	predicted gene 13266
chr2	14968793;14973048	14973029;14976373	+	14968793;14972886	14972753;14976373	MXE	0.5	100	100	ENSMUST00000114723.9	ENSMUSG00000057914.16	Cacnb2	chr2	protein_coding	calcium channel, voltage-dependent, beta 2 subunit
chr2	14879700	14901267	+	14879700	14963577	A3SS	0.5	50	50	ENSMUST00000114723.9	ENSMUSG00000057914.16	Cacnb2	chr2	protein_coding	calcium channel, voltage-dependent, beta 2 subunit
chr2	14987694	14989065	+	14987694	14989062	A3SS	0.5	50	50	ENSMUST00000114723.9	ENSMUSG00000057914.16	Cacnb2	chr2	protein_coding	calcium channel, voltage-dependent, beta 2 subunit
chr2	14610062	14619075	+	14609369	14619075	A5SS	0.5	50	50	ENSMUST00000114723.9	ENSMUSG00000057914.16	Cacnb2	chr2	protein_coding	calcium channel, voltage-dependent, beta 2 subunit
chr2	14744574	14879581	+	14619167	14879581	A5SS	0.14	50	50	ENSMUST00000114723.9	ENSMUSG00000057914.16	Cacnb2	chr2	protein_coding	calcium channel, voltage-dependent, beta 2 subunit
chr2	14768803	14879581	+	14619167	14879581	A5SS	0.14	50	50	ENSMUST00000114723.9	ENSMUSG00000057914.16	Cacnb2	chr2	protein_coding	calcium channel, voltage-dependent, beta 2 subunit
chr2	14829117	14879581	+	14619167	14879581	A5SS	0.14	50	50	ENSMUST00000114723.9	ENSMUSG00000057914.16	Cacnb2	chr2	protein_coding	calcium channel, voltage-dependent, beta 2 subunit
chr2	14878756	14879581	+	14619167	14879581	A5SS	0.14	50	50	ENSMUST00000114723.9	ENSMUSG00000057914.16	Cacnb2	chr2	protein_coding	calcium channel, voltage-dependent, beta 2 subunit
chr2	14879002	14879581	+	14619167	14879581	A5SS	0.14	50	50	ENSMUST00000114723.9	ENSMUSG00000057914.16	Cacnb2	chr2	protein_coding	calcium channel, voltage-dependent, beta 2 subunit
chr2	14879348	14879581	+	14619167	14879581	A5SS	0.14	50	50	ENSMUST00000114723.9	ENSMUSG00000057914.16	Cacnb2	chr2	protein_coding	calcium channel, voltage-dependent, beta 2 subunit
chr2	14968808	14976373	+	14972886	14976373	A5SS&ES	0.33	50	50	ENSMUST00000114723.9	ENSMUSG00000057914.16	Cacnb2	chr2	protein_coding	calcium channel, voltage-dependent, beta 2 subunit
chr2	14976457	14976873	+	14976453	14976873	A5SS	0.5	50	50	ENSMUST00000114723.9	ENSMUSG00000057914.16	Cacnb2	chr2	protein_coding	calcium channel, voltage-dependent, beta 2 subunit
chr2	14768803	14879581	+	14744574	14879581	A5SS	0.14	50	50	ENSMUST00000193262.6	ENSMUSG00000057914.16	Cacnb2	chr2	protein_coding	calcium channel, voltage-dependent, beta 2 subunit
chr2	14829117	14879581	+	14744574	14879581	A5SS	0.14	50	50	ENSMUST00000193262.6	ENSMUSG00000057914.16	Cacnb2	chr2	protein_coding	calcium channel, voltage-dependent, beta 2 subunit
chr2	14878756	14879581	+	14744574	14879581	A5SS	0.14	50	50	ENSMUST00000193262.6	ENSMUSG00000057914.16	Cacnb2	chr2	protein_coding	calcium channel, voltage-dependent, beta 2 subunit
chr2	14879002	14879581	+	14744574	14879581	A5SS	0.14	50	50	ENSMUST00000193262.6	ENSMUSG00000057914.16	Cacnb2	chr2	protein_coding	calcium channel, voltage-dependent, beta 2 subunit
chr2	14879348	14879581	+	14744574	14879581	A5SS	0.14	50	50	ENSMUST00000193262.6	ENSMUSG00000057914.16	Cacnb2	chr2	protein_coding	calcium channel, voltage-dependent, beta 2 subunit
chr2	14829117	14879581	+	14768803	14879581	A5SS	0.14	50	50	ENSMUST00000137746.8	ENSMUSG00000057914.16	Cacnb2	chr2	protein_coding	calcium channel, voltage-dependent, beta 2 subunit
chr2	14878756	14879581	+	14768803	14879581	A5SS	0.14	50	50	ENSMUST00000137746.8	ENSMUSG00000057914.16	Cacnb2	chr2	protein_coding	calcium channel, voltage-dependent, beta 2 subunit
chr2	14879002	14879581	+	14768803	14879581	A5SS	0.14	50	50	ENSMUST00000137746.8	ENSMUSG00000057914.16	Cacnb2	chr2	protein_coding	calcium channel, voltage-dependent, beta 2 subunit
chr2	14879348	14879581	+	14768803	14879581	A5SS	0.14	50	50	ENSMUST00000137746.8	ENSMUSG00000057914.16	Cacnb2	chr2	protein_coding	calcium channel, voltage-dependent, beta 2 subunit
chr2	14878756	14879581	+	14829117	14879581	A5SS	0.14	50	50	ENSMUST00000194921.6	ENSMUSG00000057914.16	Cacnb2	chr2	protein_coding	calcium channel, voltage-dependent, beta 2 subunit
chr2	14879002	14879581	+	14829117	14879581	A5SS	0.14	50	50	ENSMUST00000194921.6	ENSMUSG00000057914.16	Cacnb2	chr2	protein_coding	calcium channel, voltage-dependent, beta 2 subunit
chr2	14879348	14879581	+	14829117	14879581	A5SS	0.14	50	50	ENSMUST00000194921.6	ENSMUSG00000057914.16	Cacnb2	chr2	protein_coding	calcium channel, voltage-dependent, beta 2 subunit
chr2	14879002	14879581	+	14878756	14879581	A5SS	0.14	50	50	ENSMUST00000114718.8	ENSMUSG00000057914.16	Cacnb2	chr2	protein_coding	calcium channel, voltage-dependent, beta 2 subunit
chr2	14879348	14879581	+	14878756	14879581	A5SS	0.14	50	50	ENSMUST00000114718.8	ENSMUSG00000057914.16	Cacnb2	chr2	protein_coding	calcium channel, voltage-dependent, beta 2 subunit
chr2	14968808	14976373	+	14973048	14976373	A5SS&ES	0.33	50	50	ENSMUST00000114718.8	ENSMUSG00000057914.16	Cacnb2	chr2	protein_coding	calcium channel, voltage-dependent, beta 2 subunit
chr2	14879348	14879581	+	14879002	14879581	A5SS	0.14	50	50	ENSMUST00000123719.7	ENSMUSG00000057914.16	Cacnb2	chr2	protein_coding	calcium channel, voltage-dependent, beta 2 subunit
chr2	14750890	14771704	-	14750890	14768052	5pMXE	0.5	50	50	ENSMUST00000143458.7	ENSMUSG00000087086.8	Gm13269	chr2	lncRNA	predicted gene 13269
chr2	15043038	15047038	-	15043038;15044653	15044544;15047038	ES	0.5	50	50	ENSMUST00000028034.15	ENSMUSG00000026707.16	Nsun6	chr2	protein_coding	NOL1/NOP2/Sun domain family member 6
chr2	15052114	15059476	-	15052114	15053733	5pMXE	0.33	50	50	ENSMUST00000028034.15	ENSMUSG00000026707.16	Nsun6	chr2	protein_coding	NOL1/NOP2/Sun domain family member 6
chr2	15052114	15053806	-	15052114	15053733	A5SS	0.33	50	50	ENSMUST00000028034.15	ENSMUSG00000026707.16	Nsun6	chr2	protein_coding	NOL1/NOP2/Sun domain family member 6
chr2	15052114	15059476	-	15052114;15054028	15053733;15059476	ES	0.33	50	50	ENSMUST00000076435.9	ENSMUSG00000026707.16	Nsun6	chr2	protein_coding	NOL1/NOP2/Sun domain family member 6
chr2	15054123	15059476	-	15054028	15059476	A3SS	0.33	50	50	ENSMUST00000076435.9	ENSMUSG00000026707.16	Nsun6	chr2	protein_coding	NOL1/NOP2/Sun domain family member 6
chr2	15052114	15059476	-	15052114;15054123	15053733;15059476	ES	0.33	50	50	ENSMUST00000195749.6	ENSMUSG00000026707.16	Nsun6	chr2	protein_coding	NOL1/NOP2/Sun domain family member 6
chr2	15052114;15054028	15053806;15059476	-	15052114	15059476	cassetteExon	0.5	100	100	ENSMUST00000114715.8	ENSMUSG00000026707.16	Nsun6	chr2	protein_coding	NOL1/NOP2/Sun domain family member 6
chr2	15052114;15054123	15053806;15059476	-	15052114	15059476	cassetteExon	0.5	100	100	ENSMUST00000114715.8	ENSMUSG00000026707.16	Nsun6	chr2	protein_coding	NOL1/NOP2/Sun domain family member 6
chr2	15052114	15059476	-	15052114	15053806	5pMXE	0.33	50	50	ENSMUST00000192769.2	ENSMUSG00000026707.16	Nsun6	chr2	protein_coding	NOL1/NOP2/Sun domain family member 6
chr2	15073010	15074648	+	15073010	15074631	A3SS	0.33	50	50	ENSMUST00000017562.13	ENSMUSG00000017418.15	Arl5b	chr2	protein_coding	ADP-ribosylation factor-like 5B
chr2	15073010	15074669	+	15073010	15074631	A3SS	0.33	50	50	ENSMUST00000017562.13	ENSMUSG00000017418.15	Arl5b	chr2	protein_coding	ADP-ribosylation factor-like 5B
chr2	15060385	15072950	+	15054496	15072950	A5SS	0.5	50	50	ENSMUST00000017562.13	ENSMUSG00000017418.15	Arl5b	chr2	protein_coding	ADP-ribosylation factor-like 5B
chr2	15060385	15082130	+	15060385	15072950	A3SS&ES	0.5	50	50	ENSMUST00000069870.11	ENSMUSG00000017418.15	Arl5b	chr2	protein_coding	ADP-ribosylation factor-like 5B
chr2	15073010	15074648	+	15073010	15074669	A3SS	0.33	50	50	ENSMUST00000128682.9	ENSMUSG00000017418.15	Arl5b	chr2	protein_coding	ADP-ribosylation factor-like 5B
chr2	16517044	16570147	+	16517044;16553074	16552928;16570147	ES	0.5	50	50	ENSMUST00000028081.13	ENSMUSG00000026748.14	Plxdc2	chr2	protein_coding	plexin domain containing 2
chr2	16674715	16716893	+	16674715;16708194	16708128;16716893	ES	0.33	50	50	ENSMUST00000028081.13	ENSMUSG00000026748.14	Plxdc2	chr2	protein_coding	plexin domain containing 2
chr2	16708188	16716893	+	16708194	16716893	A5SS	0.33	50	50	ENSMUST00000028081.13	ENSMUSG00000026748.14	Plxdc2	chr2	protein_coding	plexin domain containing 2
chr2	16674715	16716893	+	16674715;16708188	16708128;16716893	ES	0.33	50	50	ENSMUST00000114703.10	ENSMUSG00000026748.14	Plxdc2	chr2	protein_coding	plexin domain containing 2
chr2	17355622;17375362	17375270;17378996	-	17355622	17378996	cassetteExon	0.5	100	100	ENSMUST00000028080.12	ENSMUSG00000053702.17	Nebl	chr2	protein_coding	nebulette
chr2	17355622	17365847	-	17355622	17378996	A5SS	0.25	50	50	ENSMUST00000028080.12	ENSMUSG00000053702.17	Nebl	chr2	protein_coding	nebulette
chr2	17355622	17374340	-	17355622	17378996	A5SS	0.25	50	50	ENSMUST00000028080.12	ENSMUSG00000053702.17	Nebl	chr2	protein_coding	nebulette
chr2	17379167	17380027	-	17379167	17534721	A5SS	0.5	50	50	ENSMUST00000028080.12	ENSMUSG00000053702.17	Nebl	chr2	protein_coding	nebulette
chr2	17355622	17375270	-	17355622;17374489	17374340;17375270	ES	0.5	50	50	ENSMUST00000124270.8	ENSMUSG00000053702.17	Nebl	chr2	protein_coding	nebulette
chr2	17381526	17384561	-	17381526;17383011	17382919;17384561	ES	0.5	50	50	ENSMUST00000124270.8	ENSMUSG00000053702.17	Nebl	chr2	protein_coding	nebulette
chr2	17384653	17393503	-	17384653;17387763	17387671;17393503	ES	0.5	50	50	ENSMUST00000124270.8	ENSMUSG00000053702.17	Nebl	chr2	protein_coding	nebulette
chr2	17398087	17405285	-	17398087;17401978	17401868;17405285	ES	0.5	50	50	ENSMUST00000124270.8	ENSMUSG00000053702.17	Nebl	chr2	protein_coding	nebulette
chr2	17418598	17429332	-	17418598;17422808	17422704;17429332	ES	0.5	50	50	ENSMUST00000124270.8	ENSMUSG00000053702.17	Nebl	chr2	protein_coding	nebulette
chr2	17355622	17365847	-	17355622	17374340	A5SS	0.25	50	50	ENSMUST00000124270.8	ENSMUSG00000053702.17	Nebl	chr2	protein_coding	nebulette
chr2	17355622	17375270	-	17355622	17365847	5pMXE	0.25	50	50	ENSMUST00000138241.2	ENSMUSG00000053702.17	Nebl	chr2	protein_coding	nebulette
chr2	17381526	17384561	-	17383011	17384561	3pMXE	0.5	50	50	ENSMUST00000177966.2	ENSMUSG00000053702.17	Nebl	chr2	protein_coding	nebulette
chr2	17398087	17405285	-	17401978	17405285	3pMXE	0.5	50	50	ENSMUST00000145492.2	ENSMUSG00000053702.17	Nebl	chr2	protein_coding	nebulette
chr2	18033049	18033522	-	18033049	18042378	A5SS	0.5	50	50	ENSMUST00000066163.3	ENSMUSG00000054057.3	A930004D18Rik	chr2	protein_coding	RIKEN cDNA A930004D18 gene
chr2	18053263	18053759	-	18053263	18053498	5pMXE	0.5	50	50	ENSMUST00000142856.2	ENSMUSG00000054074.10	Skida1	chr2	protein_coding	SKI/DACH domain containing 1
chr2	18076015	18114593	+	18076015;18106323	18106269;18114593	ES	0.5	50	50	ENSMUST00000028076.15	ENSMUSG00000026743.17	Mllt10	chr2	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10
chr2	18076015;18087536	18087322;18106269	+	18076015	18106269	cassetteExon	0.5	100	100	ENSMUST00000028076.15	ENSMUSG00000026743.17	Mllt10	chr2	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10
chr2	18076015;18097645	18097595;18106269	+	18076015	18106269	cassetteExon	0.5	100	100	ENSMUST00000028076.15	ENSMUSG00000026743.17	Mllt10	chr2	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10
chr2	18131040;18144147	18144079;18151588	+	18131040	18151588	cassetteExon	0.5	100	100	ENSMUST00000028076.15	ENSMUSG00000026743.17	Mllt10	chr2	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10
chr2	18164522	18167419	+	18164522	18167128	A3SS	0.5	50	50	ENSMUST00000028076.15	ENSMUSG00000026743.17	Mllt10	chr2	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10
chr2	18191207	18191420	+	18191207	18201394	A3SS	0.5	50	50	ENSMUST00000028076.15	ENSMUSG00000026743.17	Mllt10	chr2	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10
chr2	18069306	18069846	+	18060182	18069846	A5SS	0.25	50	50	ENSMUST00000028076.15	ENSMUSG00000026743.17	Mllt10	chr2	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10
chr2	18069649	18069846	+	18060182	18069846	A5SS	0.25	50	50	ENSMUST00000028076.15	ENSMUSG00000026743.17	Mllt10	chr2	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10
chr2	18069675	18069846	+	18060182	18069846	A5SS	0.25	50	50	ENSMUST00000028076.15	ENSMUSG00000026743.17	Mllt10	chr2	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10
chr2	18069649	18069846	+	18069306	18069846	A5SS	0.25	50	50	ENSMUST00000150422.8	ENSMUSG00000026743.17	Mllt10	chr2	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10
chr2	18069675	18069846	+	18069306	18069846	A5SS	0.25	50	50	ENSMUST00000150422.8	ENSMUSG00000026743.17	Mllt10	chr2	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10
chr2	18076015;18087536	18087322;18106269	+	18076015;18097645	18097595;18106269	MXE	0.5	100	100	ENSMUST00000114671.8	ENSMUSG00000026743.17	Mllt10	chr2	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10
chr2	18069649	18069846	+	18069675	18069846	A5SS	0.25	50	50	ENSMUST00000114671.8	ENSMUSG00000026743.17	Mllt10	chr2	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10
chr2	18076015	18087322	+	18076015	18114593	A3SS	0.25	50	50	ENSMUST00000154041.8	ENSMUSG00000026743.17	Mllt10	chr2	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10
chr2	18076015	18097595	+	18076015	18114593	A3SS	0.25	50	50	ENSMUST00000154041.8	ENSMUSG00000026743.17	Mllt10	chr2	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10
chr2	18214231	18222056	-	18200732	18222056	A3SS	0.5	50	50	ENSMUST00000148401.8	ENSMUSG00000026740.13	Dnajc1	chr2	protein_coding	DnaJ heat shock protein family (Hsp40) member C1
chr2	18236634	18298765	-	18236634;18289597	18289434;18298765	ES	0.5	50	50	ENSMUST00000091418.12	ENSMUSG00000026740.13	Dnajc1	chr2	protein_coding	DnaJ heat shock protein family (Hsp40) member C1
chr2	18289597	18311784	-	18289597;18298855	18298765;18311784	ES	0.5	50	50	ENSMUST00000091418.12	ENSMUSG00000026740.13	Dnajc1	chr2	protein_coding	DnaJ heat shock protein family (Hsp40) member C1
chr2	18313760	18321710	-	18313760;18321215	18321169;18321710	ES	0.5	50	50	ENSMUST00000091418.12	ENSMUSG00000026740.13	Dnajc1	chr2	protein_coding	DnaJ heat shock protein family (Hsp40) member C1
chr2	18214231	18221186	-	18214231	18222056	A5SS	0.5	50	50	ENSMUST00000091418.12	ENSMUSG00000026740.13	Dnajc1	chr2	protein_coding	DnaJ heat shock protein family (Hsp40) member C1
chr2	18236634;18289597	18289434;18311784	-	18236634;18298855	18298765;18311784	MXE	0.5	100	100	ENSMUST00000163130.8	ENSMUSG00000026740.13	Dnajc1	chr2	protein_coding	DnaJ heat shock protein family (Hsp40) member C1
chr2	18321811	18397102	-	18298855	18397102	A3SS	0.5	50	50	ENSMUST00000168723.2	ENSMUSG00000026740.13	Dnajc1	chr2	protein_coding	DnaJ heat shock protein family (Hsp40) member C1
chr2	18289597	18311784	-	18289597	18298765	A5SS&ES	0.5	50	50	ENSMUST00000168723.2	ENSMUSG00000026740.13	Dnajc1	chr2	protein_coding	DnaJ heat shock protein family (Hsp40) member C1
chr2	18298855	18311784	-	18298855	18397102	A5SS	0.5	50	50	ENSMUST00000168723.2	ENSMUSG00000026740.13	Dnajc1	chr2	protein_coding	DnaJ heat shock protein family (Hsp40) member C1
chr2	18677414	18678726	+	18677414	18678706	A3SS	0.5	50	50	ENSMUST00000171845.8	ENSMUSG00000051154.12	Commd3	chr2	protein_coding	COMM domain containing 3
chr2	18679172	18679467	+	18679126	18679467	A5SS	0.5	50	50	ENSMUST00000171845.8	ENSMUSG00000051154.12	Commd3	chr2	protein_coding	COMM domain containing 3
chr2	18682642	18686604	+	18682280	18686604	A5SS	0.2	50	50	ENSMUST00000028071.13	ENSMUSG00000026739.14	Bmi1	chr2	protein_coding	Bmi1 polycomb ring finger oncogene
chr2	18685286	18686604	+	18682280	18686604	A5SS	0.2	50	50	ENSMUST00000028071.13	ENSMUSG00000026739.14	Bmi1	chr2	protein_coding	Bmi1 polycomb ring finger oncogene
chr2	18685896	18686604	+	18682280	18686604	A5SS	0.2	50	50	ENSMUST00000028071.13	ENSMUSG00000026739.14	Bmi1	chr2	protein_coding	Bmi1 polycomb ring finger oncogene
chr2	18686030	18686604	+	18682280	18686604	A5SS	0.2	50	50	ENSMUST00000028071.13	ENSMUSG00000026739.14	Bmi1	chr2	protein_coding	Bmi1 polycomb ring finger oncogene
chr2	18685286	18686604	+	18682642	18686604	A5SS	0.2	50	50	ENSMUST00000150834.8	ENSMUSG00000026739.14	Bmi1	chr2	protein_coding	Bmi1 polycomb ring finger oncogene
chr2	18685896	18686604	+	18682642	18686604	A5SS	0.2	50	50	ENSMUST00000150834.8	ENSMUSG00000026739.14	Bmi1	chr2	protein_coding	Bmi1 polycomb ring finger oncogene
chr2	18686030	18686604	+	18682642	18686604	A5SS	0.2	50	50	ENSMUST00000150834.8	ENSMUSG00000026739.14	Bmi1	chr2	protein_coding	Bmi1 polycomb ring finger oncogene
chr2	18685896	18686604	+	18685286	18686604	A5SS	0.2	50	50	ENSMUST00000051929.13	ENSMUSG00000026739.14	Bmi1	chr2	protein_coding	Bmi1 polycomb ring finger oncogene
chr2	18686030	18686604	+	18685286	18686604	A5SS	0.2	50	50	ENSMUST00000051929.13	ENSMUSG00000026739.14	Bmi1	chr2	protein_coding	Bmi1 polycomb ring finger oncogene
chr2	18686030	18686604	+	18685896	18686604	A5SS	0.2	50	50	ENSMUST00000134734.8	ENSMUSG00000026739.14	Bmi1	chr2	protein_coding	Bmi1 polycomb ring finger oncogene
chr2	18699138	18703310	+	18699308	18703310	A5SS	0.5	50	50	ENSMUST00000137796.8	ENSMUSG00000037708.17	Spag6	chr2	protein_coding	sperm associated antigen 6
chr2	18850789	18857624	-	18850789;18852488	18852245;18857624	ES	0.5	50	50	ENSMUST00000006912.12	ENSMUSG00000026737.13	Pip4k2a	chr2	protein_coding	phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
chr2	18857737	18877095	-	18857737;18870961	18870923;18877095	ES	0.5	50	50	ENSMUST00000006912.12	ENSMUSG00000026737.13	Pip4k2a	chr2	protein_coding	phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
chr2	18857737	18877095	-	18857737	18870923	5pMXE	0.5	50	50	ENSMUST00000148583.8	ENSMUSG00000026737.13	Pip4k2a	chr2	protein_coding	phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
chr2	18850789	18857624	-	18852488	18857624	3pMXE	0.5	50	50	ENSMUST00000152981.2	ENSMUSG00000026737.13	Pip4k2a	chr2	protein_coding	phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
chr2	19301722	19305283	+	19301722;19302764	19302717;19305283	ES	0.5	50	50	ENSMUST00000114640.9	ENSMUSG00000037683.15	Armc3	chr2	protein_coding	armadillo repeat containing 3
chr2	19301235	19301615	+	19301235	19301627	A3SS	0.5	50	50	ENSMUST00000114640.9	ENSMUSG00000037683.15	Armc3	chr2	protein_coding	armadillo repeat containing 3
chr2	19353422	19355749	+	19353422	19353555	3pMXE	0.5	50	50	ENSMUST00000141289.8	ENSMUSG00000087674.8	4930447M23Rik	chr2	lncRNA	RIKEN cDNA 4930447M23 gene
chr2	19349978	19352376	+	19349930	19352376	A5SS	0.5	50	50	ENSMUST00000141289.8	ENSMUSG00000087674.8	4930447M23Rik	chr2	lncRNA	RIKEN cDNA 4930447M23 gene
chr2	19383073	19398019	+	19383073	19388052	3pMXE	0.5	50	50	ENSMUST00000137812.8	ENSMUSG00000023094.15	Msrb2	chr2	protein_coding	methionine sulfoxide reductase B2
chr2	19376590	19382973	+	19376354	19382973	A5SS	0.33	50	50	ENSMUST00000137812.8	ENSMUSG00000023094.15	Msrb2	chr2	protein_coding	methionine sulfoxide reductase B2
chr2	19376728	19382973	+	19376354	19382973	A5SS	0.33	50	50	ENSMUST00000137812.8	ENSMUSG00000023094.15	Msrb2	chr2	protein_coding	methionine sulfoxide reductase B2
chr2	19383073	19398019	+	19383073;19388128	19388052;19398019	ES	0.5	50	50	ENSMUST00000023856.9	ENSMUSG00000023094.15	Msrb2	chr2	protein_coding	methionine sulfoxide reductase B2
chr2	19376728	19382973	+	19376590	19382973	A5SS	0.33	50	50	ENSMUST00000023856.9	ENSMUSG00000023094.15	Msrb2	chr2	protein_coding	methionine sulfoxide reductase B2
chr2	20294852;20344920	20344733;20534770	+	20294852	20534770	cassetteExon	0.5	100	100	ENSMUST00000114610.8	ENSMUSG00000036617.18	Etl4	chr2	protein_coding	enhancer trap locus 4
chr2	20535053;20653864	20653784;20666709	+	20535053	20666709	cassetteExon	0.5	100	100	ENSMUST00000114610.8	ENSMUSG00000036617.18	Etl4	chr2	protein_coding	enhancer trap locus 4
chr2	20524738	20534770	+	20294852	20534770	A5SS	0.33	50	50	ENSMUST00000114610.8	ENSMUSG00000036617.18	Etl4	chr2	protein_coding	enhancer trap locus 4
chr2	20552927	20666709	+	20535053	20666709	A5SS	0.25	50	50	ENSMUST00000114610.8	ENSMUSG00000036617.18	Etl4	chr2	protein_coding	enhancer trap locus 4
chr2	20565005	20666709	+	20535053	20666709	A5SS	0.25	50	50	ENSMUST00000114610.8	ENSMUSG00000036617.18	Etl4	chr2	protein_coding	enhancer trap locus 4
chr2	20727534	20748270	+	20718259	20748270	A5SS	0.33	50	50	ENSMUST00000114610.8	ENSMUSG00000036617.18	Etl4	chr2	protein_coding	enhancer trap locus 4
chr2	20742366	20748270	+	20718259	20748270	A5SS	0.33	50	50	ENSMUST00000114610.8	ENSMUSG00000036617.18	Etl4	chr2	protein_coding	enhancer trap locus 4
chr2	20524738	20534770	+	20344920	20534770	A5SS	0.33	50	50	ENSMUST00000146881.8	ENSMUSG00000036617.18	Etl4	chr2	protein_coding	enhancer trap locus 4
chr2	20749102	20765026	+	20749102;20764462	20764358;20765026	ES	0.5	50	50	ENSMUST00000114627.8	ENSMUSG00000036617.18	Etl4	chr2	protein_coding	enhancer trap locus 4
chr2	20810473	20812713	+	20810473;20812184	20810586;20812713	ES	0.25	50	50	ENSMUST00000114627.8	ENSMUSG00000036617.18	Etl4	chr2	protein_coding	enhancer trap locus 4
chr2	20790278	20793239	+	20790311	20793239	A5SS	0.5	50	50	ENSMUST00000114627.8	ENSMUSG00000036617.18	Etl4	chr2	protein_coding	enhancer trap locus 4
chr2	20294852	20534770	+	20344920	20534770	5pMXE	0.33	50	50	ENSMUST00000131714.8	ENSMUSG00000036617.18	Etl4	chr2	protein_coding	enhancer trap locus 4
chr2	20552927	20666709	+	20653864	20666709	A5SS&ES	0.25	50	50	ENSMUST00000238889.2	ENSMUSG00000036617.18	Etl4	chr2	protein_coding	enhancer trap locus 4
chr2	20565005	20666709	+	20653864	20666709	A5SS&ES	0.25	50	50	ENSMUST00000238889.2	ENSMUSG00000036617.18	Etl4	chr2	protein_coding	enhancer trap locus 4
chr2	20803594	20812713	+	20803594;20806472	20806353;20812713	ES	0.25	50	50	ENSMUST00000045555.11	ENSMUSG00000036617.18	Etl4	chr2	protein_coding	enhancer trap locus 4
chr2	20806472;20810473	20810396;20812713	+	20806472	20812713	cassetteExon	0.5	100	100	ENSMUST00000045555.11	ENSMUSG00000036617.18	Etl4	chr2	protein_coding	enhancer trap locus 4
chr2	20812184	20812713	+	20806472	20812713	A5SS	0.25	50	50	ENSMUST00000045555.11	ENSMUSG00000036617.18	Etl4	chr2	protein_coding	enhancer trap locus 4
chr2	20810473	20812713	+	20803594	20812713	A5SS	0.25	50	50	ENSMUST00000114604.9	ENSMUSG00000036617.18	Etl4	chr2	protein_coding	enhancer trap locus 4
chr2	20812184	20812713	+	20803594	20812713	A5SS	0.25	50	50	ENSMUST00000114604.9	ENSMUSG00000036617.18	Etl4	chr2	protein_coding	enhancer trap locus 4
chr2	20565005	20666709	+	20552927	20666709	A5SS	0.25	50	50	ENSMUST00000129278.8	ENSMUSG00000036617.18	Etl4	chr2	protein_coding	enhancer trap locus 4
chr2	20742366	20748270	+	20727534	20748270	A5SS	0.33	50	50	ENSMUST00000146488.8	ENSMUSG00000036617.18	Etl4	chr2	protein_coding	enhancer trap locus 4
chr2	20803594	20812713	+	20803594	20806353	3pMXE	0.5	50	50	ENSMUST00000125772.2	ENSMUSG00000036617.18	Etl4	chr2	protein_coding	enhancer trap locus 4
chr2	20810473	20810586	+	20810473	20812713	A3SS	0.5	50	50	ENSMUST00000114607.8	ENSMUSG00000036617.18	Etl4	chr2	protein_coding	enhancer trap locus 4
chr2	20812184	20812713	+	20810473	20812713	A5SS	0.25	50	50	ENSMUST00000114607.8	ENSMUSG00000036617.18	Etl4	chr2	protein_coding	enhancer trap locus 4
chr2	20426490	20437659	-	20426490	20431715	5pMXE	0.5	50	50	ENSMUST00000129994.8	ENSMUSG00000085477.8	Gm13335	chr2	lncRNA	predicted gene 13335
chr2	20886662	20891917	-	20886662;20888040	20888011;20891917	ES	0.33	50	50	ENSMUST00000154230.9	ENSMUSG00000036591.17	Arhgap21	chr2	protein_coding	Rho GTPase activating protein 21
chr2	20857880;20858789	20858769;20859746	-	20857880	20859746	cassetteExon	0.5	100	100	ENSMUST00000154230.9	ENSMUSG00000036591.17	Arhgap21	chr2	protein_coding	Rho GTPase activating protein 21
chr2	20857880;20859043	20858769;20859746	-	20857880	20859746	cassetteExon	0.5	100	100	ENSMUST00000154230.9	ENSMUSG00000036591.17	Arhgap21	chr2	protein_coding	Rho GTPase activating protein 21
chr2	20857880;20859454	20859431;20859746	-	20857880	20859746	cassetteExon	0.5	100	100	ENSMUST00000154230.9	ENSMUSG00000036591.17	Arhgap21	chr2	protein_coding	Rho GTPase activating protein 21
chr2	20865921	20865997	-	20865918	20865997	A3SS	0.5	50	50	ENSMUST00000154230.9	ENSMUSG00000036591.17	Arhgap21	chr2	protein_coding	Rho GTPase activating protein 21
chr2	20891550	20891917	-	20888040	20891917	A3SS	0.33	50	50	ENSMUST00000154230.9	ENSMUSG00000036591.17	Arhgap21	chr2	protein_coding	Rho GTPase activating protein 21
chr2	20919622	20948094	-	20919622	20972141	A5SS	0.33	50	50	ENSMUST00000154230.9	ENSMUSG00000036591.17	Arhgap21	chr2	protein_coding	Rho GTPase activating protein 21
chr2	20919622	20972159	-	20919622	20972141	A5SS	0.33	50	50	ENSMUST00000154230.9	ENSMUSG00000036591.17	Arhgap21	chr2	protein_coding	Rho GTPase activating protein 21
chr2	20972527	20973295	-	20972531	20973295	A3SS	0.5	50	50	ENSMUST00000114594.8	ENSMUSG00000036591.17	Arhgap21	chr2	protein_coding	Rho GTPase activating protein 21
chr2	20919622	20948094	-	20919622	20972159	A5SS	0.33	50	50	ENSMUST00000114594.8	ENSMUSG00000036591.17	Arhgap21	chr2	protein_coding	Rho GTPase activating protein 21
chr2	20972531	20973254	-	20972531	20973295	A5SS	0.25	50	50	ENSMUST00000114594.8	ENSMUSG00000036591.17	Arhgap21	chr2	protein_coding	Rho GTPase activating protein 21
chr2	20972531	20973291	-	20972531	20973295	A5SS	0.25	50	50	ENSMUST00000114594.8	ENSMUSG00000036591.17	Arhgap21	chr2	protein_coding	Rho GTPase activating protein 21
chr2	20972531	20973298	-	20972531	20973295	A5SS	0.25	50	50	ENSMUST00000114594.8	ENSMUSG00000036591.17	Arhgap21	chr2	protein_coding	Rho GTPase activating protein 21
chr2	20891550	20891917	-	20886662	20891917	A3SS	0.33	50	50	ENSMUST00000173194.8	ENSMUSG00000036591.17	Arhgap21	chr2	protein_coding	Rho GTPase activating protein 21
chr2	20886662	20891917	-	20886662	20888011	5pMXE	0.5	50	50	ENSMUST00000174584.8	ENSMUSG00000036591.17	Arhgap21	chr2	protein_coding	Rho GTPase activating protein 21
chr2	20857880;20859454	20859431;20859746	-	20857880;20859043	20858769;20859746	MXE	0.5	100	100	ENSMUST00000174584.8	ENSMUSG00000036591.17	Arhgap21	chr2	protein_coding	Rho GTPase activating protein 21
chr2	20858789	20859746	-	20859043	20859746	A3SS	0.25	50	50	ENSMUST00000174584.8	ENSMUSG00000036591.17	Arhgap21	chr2	protein_coding	Rho GTPase activating protein 21
chr2	20857880	20859746	-	20857880	20858769	5pMXE	0.33	50	50	ENSMUST00000143491.3	ENSMUSG00000036591.17	Arhgap21	chr2	protein_coding	Rho GTPase activating protein 21
chr2	20857880	20859431	-	20857880	20858769	A5SS	0.33	50	50	ENSMUST00000143491.3	ENSMUSG00000036591.17	Arhgap21	chr2	protein_coding	Rho GTPase activating protein 21
chr2	20857880;20859454	20859431;20859746	-	20857880;20858789	20858769;20859746	MXE	0.5	100	100	ENSMUST00000136241.9	ENSMUSG00000036591.17	Arhgap21	chr2	protein_coding	Rho GTPase activating protein 21
chr2	20972531	20973254	-	20972531	20973291	A5SS	0.25	50	50	ENSMUST00000125783.3	ENSMUSG00000036591.17	Arhgap21	chr2	protein_coding	Rho GTPase activating protein 21
chr2	20972531	20973298	-	20972531	20973291	A5SS	0.25	50	50	ENSMUST00000125783.3	ENSMUSG00000036591.17	Arhgap21	chr2	protein_coding	Rho GTPase activating protein 21
chr2	20972531	20973298	-	20972531	20973254	5pMXE	0.25	50	50	ENSMUST00000131394.2	ENSMUSG00000036591.17	Arhgap21	chr2	protein_coding	Rho GTPase activating protein 21
chr2	21214852	21217752	+	21214852	21216201	A3SS	0.33	50	50	ENSMUST00000054591.10	ENSMUSG00000048550.18	Thnsl1	chr2	protein_coding	threonine synthase-like 1 (bacterial)
chr2	21214852	21217773	+	21214852	21216201	A3SS	0.33	50	50	ENSMUST00000054591.10	ENSMUSG00000048550.18	Thnsl1	chr2	protein_coding	threonine synthase-like 1 (bacterial)
chr2	21210800	21214696	+	21210656	21214696	A5SS	0.5	50	50	ENSMUST00000054591.10	ENSMUSG00000048550.18	Thnsl1	chr2	protein_coding	threonine synthase-like 1 (bacterial)
chr2	21214852	21217752	+	21214852	21217773	A3SS	0.33	50	50	ENSMUST00000102952.8	ENSMUSG00000048550.18	Thnsl1	chr2	protein_coding	threonine synthase-like 1 (bacterial)
chr2	22469869	22491122	+	22469869;22490200	22490094;22491122	ES	0.5	50	50	ENSMUST00000044749.14	ENSMUSG00000025716.15	Myo3a	chr2	protein_coding	myosin IIIA
chr2	22232453	22245868	+	22232453	22245862	A3SS	0.5	50	50	ENSMUST00000044749.14	ENSMUSG00000025716.15	Myo3a	chr2	protein_coding	myosin IIIA
chr2	22785774;22789995	22789931;22791293	+	22785774	22791293	cassetteExon	0.5	100	100	ENSMUST00000148072.8	ENSMUSG00000026784.15	Pdss1	chr2	protein_coding	prenyl (solanesyl) diphosphate synthase, subunit 1
chr2	22796937	22802612	+	22796937	22802529	A3SS	0.5	50	50	ENSMUST00000148072.8	ENSMUSG00000026784.15	Pdss1	chr2	protein_coding	prenyl (solanesyl) diphosphate synthase, subunit 1
chr2	22825651;22829218	22829091;22829835	+	22825651	22829835	cassetteExon	0.5	100	100	ENSMUST00000053729.14	ENSMUSG00000026784.15	Pdss1	chr2	protein_coding	prenyl (solanesyl) diphosphate synthase, subunit 1
chr2	22786264	22789931	+	22785774	22789931	A5SS	0.5	50	50	ENSMUST00000135621.2	ENSMUSG00000026784.15	Pdss1	chr2	protein_coding	prenyl (solanesyl) diphosphate synthase, subunit 1
chr2	22836773	22843447	-	22836773;22840282	22840196;22843447	ES	0.5	50	50	ENSMUST00000126112.8	ENSMUSG00000058835.15	Abi1	chr2	protein_coding	abl interactor 1
chr2	22840282	22847030	-	22840282;22843623	22843447;22847030	ES	0.25	50	50	ENSMUST00000126112.8	ENSMUSG00000058835.15	Abi1	chr2	protein_coding	abl interactor 1
chr2	22852513;22853240	22853226;22861095	-	22852513	22861095	cassetteExon	0.5	100	100	ENSMUST00000126112.8	ENSMUSG00000058835.15	Abi1	chr2	protein_coding	abl interactor 1
chr2	22852513;22861053	22861039;22861095	-	22852513	22861095	cassetteExon	0.5	100	100	ENSMUST00000126112.8	ENSMUSG00000058835.15	Abi1	chr2	protein_coding	abl interactor 1
chr2	22843620	22847030	-	22843623	22847030	A3SS	0.25	50	50	ENSMUST00000126112.8	ENSMUSG00000058835.15	Abi1	chr2	protein_coding	abl interactor 1
chr2	22840282	22847030	-	22840282;22843620	22843447;22847030	ES	0.25	50	50	ENSMUST00000140164.8	ENSMUSG00000058835.15	Abi1	chr2	protein_coding	abl interactor 1
chr2	22836773	22847030	-	22836773;22843620	22843447;22847030	ES	0.25	50	50	ENSMUST00000149719.8	ENSMUSG00000058835.15	Abi1	chr2	protein_coding	abl interactor 1
chr2	22836773;22840282	22840196;22847030	-	22836773;22843620	22843447;22847030	MXE	0.5	100	100	ENSMUST00000149719.8	ENSMUSG00000058835.15	Abi1	chr2	protein_coding	abl interactor 1
chr2	22852513;22861053	22861039;22861095	-	22852513;22853240	22853226;22861095	MXE	0.5	100	100	ENSMUST00000123948.8	ENSMUSG00000058835.15	Abi1	chr2	protein_coding	abl interactor 1
chr2	22836773;22840282	22840196;22847030	-	22836773	22847030	cassetteExon	0.5	100	100	ENSMUST00000153931.8	ENSMUSG00000058835.15	Abi1	chr2	protein_coding	abl interactor 1
chr2	22836773;22843623	22843447;22847030	-	22836773	22847030	cassetteExon	0.5	100	100	ENSMUST00000153931.8	ENSMUSG00000058835.15	Abi1	chr2	protein_coding	abl interactor 1
chr2	22836773;22843623	22843447;22847030	-	22836773;22840282	22840196;22847030	MXE	0.5	100	100	ENSMUST00000139038.8	ENSMUSG00000058835.15	Abi1	chr2	protein_coding	abl interactor 1
chr2	22836773	22843447	-	22836773	22840196	5pMXE	0.33	50	50	ENSMUST00000148294.2	ENSMUSG00000058835.15	Abi1	chr2	protein_coding	abl interactor 1
chr2	22836773	22847030	-	22836773	22840196	5pMXE	0.33	50	50	ENSMUST00000148294.2	ENSMUSG00000058835.15	Abi1	chr2	protein_coding	abl interactor 1
chr2	22836773	22843447	-	22840282	22843447	3pMXE	0.5	50	50	ENSMUST00000154162.2	ENSMUSG00000058835.15	Abi1	chr2	protein_coding	abl interactor 1
chr2	22959631	22968156	+	22959631;22965622	22965502;22968156	ES	0.5	50	50	ENSMUST00000227663.2	ENSMUSG00000026781.18	Acbd5	chr2	protein_coding	acyl-Coenzyme A binding domain containing 5
chr2	22970465	22977497	+	22970465;22970712	22970680;22977497	ES	0.5	50	50	ENSMUST00000227663.2	ENSMUSG00000026781.18	Acbd5	chr2	protein_coding	acyl-Coenzyme A binding domain containing 5
chr2	22958298;22959077	22958892;22959463	+	22958298	22959463	cassetteExon	0.5	100	100	ENSMUST00000227663.2	ENSMUSG00000026781.18	Acbd5	chr2	protein_coding	acyl-Coenzyme A binding domain containing 5
chr2	22958298;22959296	22958892;22959463	+	22958298	22959463	cassetteExon	0.5	100	100	ENSMUST00000227663.2	ENSMUSG00000026781.18	Acbd5	chr2	protein_coding	acyl-Coenzyme A binding domain containing 5
chr2	22959631	22965558	+	22959631	22965502	A3SS	0.33	50	50	ENSMUST00000227663.2	ENSMUSG00000026781.18	Acbd5	chr2	protein_coding	acyl-Coenzyme A binding domain containing 5
chr2	22984529	22989574	+	22984529	22989577	A3SS	0.5	50	50	ENSMUST00000227663.2	ENSMUSG00000026781.18	Acbd5	chr2	protein_coding	acyl-Coenzyme A binding domain containing 5
chr2	22959631	22968156	+	22959631	22965502	3pMXE	0.33	50	50	ENSMUST00000144088.2	ENSMUSG00000026781.18	Acbd5	chr2	protein_coding	acyl-Coenzyme A binding domain containing 5
chr2	22959296	22959463	+	22959077	22959463	A5SS	0.33	50	50	ENSMUST00000144088.2	ENSMUSG00000026781.18	Acbd5	chr2	protein_coding	acyl-Coenzyme A binding domain containing 5
chr2	22958298	22959463	+	22959296	22959463	5pMXE	0.33	50	50	ENSMUST00000226571.2	ENSMUSG00000026781.18	Acbd5	chr2	protein_coding	acyl-Coenzyme A binding domain containing 5
chr2	22959631;22965622	22965558;22968156	+	22959631	22968156	cassetteExon	0.5	100	100	ENSMUST00000228891.2	ENSMUSG00000026781.18	Acbd5	chr2	protein_coding	acyl-Coenzyme A binding domain containing 5
chr2	22970465	22977497	+	22970712	22977497	5pMXE	0.5	50	50	ENSMUST00000227816.2	ENSMUSG00000026781.18	Acbd5	chr2	protein_coding	acyl-Coenzyme A binding domain containing 5
chr2	23047032	23050204	+	23046743	23050204	A5SS	0.5	50	50	ENSMUST00000028117.4	ENSMUSG00000026775.10	Yme1l1	chr2	protein_coding	YME1-like 1 (S. cerevisiae)
chr2	23102519	23116894	+	23102519;23102845	23102672;23116894	ES	0.5	50	50	ENSMUST00000028113.10	ENSMUSG00000026774.12	Potegl	chr2	protein_coding	POTE ankyrin domain family, member G like
chr2	23147015	23153685	+	23147015	23153682	A3SS	0.5	50	50	ENSMUST00000028113.10	ENSMUSG00000026774.12	Potegl	chr2	protein_coding	POTE ankyrin domain family, member G like
chr2	23153755	23154483	+	23153755	23156728	A3SS	0.5	50	50	ENSMUST00000028113.10	ENSMUSG00000026774.12	Potegl	chr2	protein_coding	POTE ankyrin domain family, member G like
chr2	23435286	23461855	-	23435286;23435591	23435456;23461855	ES	0.5	50	50	ENSMUST00000132484.7	ENSMUSG00000026771.15	Spopl	chr2	protein_coding	speckle-type BTB/POZ protein-like
chr2	23427650;23431627	23431531;23433209	-	23427650	23433209	cassetteExon	0.5	100	100	ENSMUST00000132484.7	ENSMUSG00000026771.15	Spopl	chr2	protein_coding	speckle-type BTB/POZ protein-like
chr2	23434838	23435165	-	23434909	23435165	A3SS	0.5	50	50	ENSMUST00000132484.7	ENSMUSG00000026771.15	Spopl	chr2	protein_coding	speckle-type BTB/POZ protein-like
chr2	23938846	23939011	-	23938846	23939332	A5SS	0.5	50	50	ENSMUST00000051416.12	ENSMUSG00000026986.15	Hnmt	chr2	protein_coding	histamine N-methyltransferase
chr2	23966110	23977139	-	23966113	23977139	A3SS	0.5	50	50	ENSMUST00000080453.8	ENSMUSG00000061809.9	Tbpl2	chr2	protein_coding	TATA box binding protein like 2
chr2	24106076	24114397	+	24106076;24106687	24106548;24114397	ES	0.5	50	50	ENSMUST00000028361.5	ENSMUSG00000026984.5	Il1f6	chr2	protein_coding	interleukin 1 family, member 6
chr2	24167542	24170823	+	24167542;24169759	24169674;24170823	ES	0.5	50	50	ENSMUST00000168941.8	ENSMUSG00000026983.11	Il1f5	chr2	protein_coding	interleukin 1 family, member 5 (delta)
chr2	24167135;24167386	24167261;24167490	+	24167135	24167490	cassetteExon	0.5	100	100	ENSMUST00000168941.8	ENSMUSG00000026983.11	Il1f5	chr2	protein_coding	interleukin 1 family, member 5 (delta)
chr2	24170950	24171164	+	24170950	24171160	A3SS	0.5	50	50	ENSMUST00000168941.8	ENSMUSG00000026983.11	Il1f5	chr2	protein_coding	interleukin 1 family, member 5 (delta)
chr2	24237566	24239427	+	24237566;24238640	24238528;24239427	ES	0.5	50	50	ENSMUST00000114487.9	ENSMUSG00000026981.16	Il1rn	chr2	protein_coding	interleukin 1 receptor antagonist
chr2	24235583	24235955	+	24235583	24237478	A3SS	0.5	50	50	ENSMUST00000114487.9	ENSMUSG00000026981.16	Il1rn	chr2	protein_coding	interleukin 1 receptor antagonist
chr2	24235380	24235532	+	24227004	24235532	A5SS	0.5	50	50	ENSMUST00000114487.9	ENSMUSG00000026981.16	Il1rn	chr2	protein_coding	interleukin 1 receptor antagonist
chr2	24257814;24258592	24258363;24284034	+	24257814	24284034	cassetteExon	0.5	100	100	ENSMUST00000140547.2	ENSMUSG00000026979.17	Psd4	chr2	protein_coding	pleckstrin and Sec7 domain containing 4
chr2	24275474	24284034	+	24257814	24284034	A5SS	0.2	50	50	ENSMUST00000140547.2	ENSMUSG00000026979.17	Psd4	chr2	protein_coding	pleckstrin and Sec7 domain containing 4
chr2	24276531	24284034	+	24257814	24284034	A5SS	0.2	50	50	ENSMUST00000140547.2	ENSMUSG00000026979.17	Psd4	chr2	protein_coding	pleckstrin and Sec7 domain containing 4
chr2	24276721	24284034	+	24257814	24284034	A5SS	0.2	50	50	ENSMUST00000140547.2	ENSMUSG00000026979.17	Psd4	chr2	protein_coding	pleckstrin and Sec7 domain containing 4
chr2	24291106	24291536	+	24291106;24291345	24291233;24291536	ES	0.5	50	50	ENSMUST00000102942.8	ENSMUSG00000026979.17	Psd4	chr2	protein_coding	pleckstrin and Sec7 domain containing 4
chr2	24275474	24284034	+	24258592	24284034	A5SS	0.2	50	50	ENSMUST00000102942.8	ENSMUSG00000026979.17	Psd4	chr2	protein_coding	pleckstrin and Sec7 domain containing 4
chr2	24275474	24286317	+	24285052	24286317	A5SS&ES	0.5	50	50	ENSMUST00000102942.8	ENSMUSG00000026979.17	Psd4	chr2	protein_coding	pleckstrin and Sec7 domain containing 4
chr2	24276531	24284034	+	24258592	24284034	A5SS	0.2	50	50	ENSMUST00000102942.8	ENSMUSG00000026979.17	Psd4	chr2	protein_coding	pleckstrin and Sec7 domain containing 4
chr2	24276721	24284034	+	24258592	24284034	A5SS	0.2	50	50	ENSMUST00000102942.8	ENSMUSG00000026979.17	Psd4	chr2	protein_coding	pleckstrin and Sec7 domain containing 4
chr2	24275474	24286317	+	24275474;24285052	24284034;24286317	ES	0.5	50	50	ENSMUST00000056641.15	ENSMUSG00000026979.17	Psd4	chr2	protein_coding	pleckstrin and Sec7 domain containing 4
chr2	24275474;24276531	24276371;24284034	+	24275474	24284034	cassetteExon	0.5	100	100	ENSMUST00000056641.15	ENSMUSG00000026979.17	Psd4	chr2	protein_coding	pleckstrin and Sec7 domain containing 4
chr2	24275474;24276721	24276371;24284034	+	24275474	24284034	cassetteExon	0.5	100	100	ENSMUST00000056641.15	ENSMUSG00000026979.17	Psd4	chr2	protein_coding	pleckstrin and Sec7 domain containing 4
chr2	24276531;24276721	24276645;24284034	+	24276531	24284034	cassetteExon	0.5	100	100	ENSMUST00000142522.8	ENSMUSG00000026979.17	Psd4	chr2	protein_coding	pleckstrin and Sec7 domain containing 4
chr2	24275474	24276371	+	24275474	24286317	A3SS	0.33	50	50	ENSMUST00000133730.2	ENSMUSG00000026979.17	Psd4	chr2	protein_coding	pleckstrin and Sec7 domain containing 4
chr2	24275474	24284034	+	24275474	24286317	A3SS	0.33	50	50	ENSMUST00000133730.2	ENSMUSG00000026979.17	Psd4	chr2	protein_coding	pleckstrin and Sec7 domain containing 4
chr2	24275474	24284034	+	24276721	24284034	5pMXE	0.2	50	50	ENSMUST00000127242.2	ENSMUSG00000026979.17	Psd4	chr2	protein_coding	pleckstrin and Sec7 domain containing 4
chr2	24276531	24284034	+	24276721	24284034	5pMXE	0.2	50	50	ENSMUST00000127242.2	ENSMUSG00000026979.17	Psd4	chr2	protein_coding	pleckstrin and Sec7 domain containing 4
chr2	24311636	24319539	-	24311636;24313067	24312981;24319539	ES	0.5	50	50	ENSMUST00000028355.11	ENSMUSG00000026976.16	Pax8	chr2	protein_coding	paired box 8
chr2	24325902	24326460	-	24325981	24326460	A3SS	0.5	50	50	ENSMUST00000028355.11	ENSMUSG00000026976.16	Pax8	chr2	protein_coding	paired box 8
chr2	24333152	24334578	-	24333149	24334578	A3SS	0.5	50	50	ENSMUST00000028355.11	ENSMUSG00000026976.16	Pax8	chr2	protein_coding	paired box 8
chr2	24365187	24365497	-	24365192	24365497	A3SS	0.5	50	50	ENSMUST00000028355.11	ENSMUSG00000026976.16	Pax8	chr2	protein_coding	paired box 8
chr2	24334743	24335665	-	24334743	24365085	A5SS	0.5	50	50	ENSMUST00000028355.11	ENSMUSG00000026976.16	Pax8	chr2	protein_coding	paired box 8
chr2	24311636	24319539	-	24311636	24312981	5pMXE	0.5	50	50	ENSMUST00000149860.2	ENSMUSG00000026976.16	Pax8	chr2	protein_coding	paired box 8
chr2	24326580	24330652	-	24319640	24330652	A3SS	0.5	50	50	ENSMUST00000153601.8	ENSMUSG00000026976.16	Pax8	chr2	protein_coding	paired box 8
chr2	24319640	24325775	-	24319640	24330652	A5SS	0.5	50	50	ENSMUST00000153601.8	ENSMUSG00000026976.16	Pax8	chr2	protein_coding	paired box 8
chr2	24341361	24351053	+	24341361	24373845	A3SS	0.5	50	50	ENSMUST00000135829.8	ENSMUSG00000085057.8	Gm13415	chr2	lncRNA	predicted gene 13415
chr2	24512719	24521911	-	24512719;24515346	24515250;24521911	ES	0.33	50	50	ENSMUST00000070864.14	ENSMUSG00000004113.19	Cacna1b	chr2	protein_coding	calcium channel, voltage-dependent, N type, alpha 1B subunit
chr2	24529222	24538491	-	24529222;24532870	24532865;24538491	ES	0.5	50	50	ENSMUST00000070864.14	ENSMUSG00000004113.19	Cacna1b	chr2	protein_coding	calcium channel, voltage-dependent, N type, alpha 1B subunit
chr2	24507798;24508374	24508267;24512611	-	24507798	24512611	cassetteExon	0.5	100	100	ENSMUST00000070864.14	ENSMUSG00000004113.19	Cacna1b	chr2	protein_coding	calcium channel, voltage-dependent, N type, alpha 1B subunit
chr2	24512719;24516931	24516835;24521911	-	24512719;24515346	24515250;24521911	MXE	0.5	100	100	ENSMUST00000070864.14	ENSMUSG00000004113.19	Cacna1b	chr2	protein_coding	calcium channel, voltage-dependent, N type, alpha 1B subunit
chr2	24544492;24546734	24546723;24547303	-	24544492	24547303	cassetteExon	0.5	100	100	ENSMUST00000070864.14	ENSMUSG00000004113.19	Cacna1b	chr2	protein_coding	calcium channel, voltage-dependent, N type, alpha 1B subunit
chr2	24496820	24497454	-	24497112	24497454	A3SS	0.5	50	50	ENSMUST00000070864.14	ENSMUSG00000004113.19	Cacna1b	chr2	protein_coding	calcium channel, voltage-dependent, N type, alpha 1B subunit
chr2	24506925	24507686	-	24506958	24507686	A3SS	0.5	50	50	ENSMUST00000070864.14	ENSMUSG00000004113.19	Cacna1b	chr2	protein_coding	calcium channel, voltage-dependent, N type, alpha 1B subunit
chr2	24569655	24575780	-	24569652	24575780	A3SS	0.33	50	50	ENSMUST00000070864.14	ENSMUSG00000004113.19	Cacna1b	chr2	protein_coding	calcium channel, voltage-dependent, N type, alpha 1B subunit
chr2	24573050	24575780	-	24569652	24575780	A3SS	0.33	50	50	ENSMUST00000070864.14	ENSMUSG00000004113.19	Cacna1b	chr2	protein_coding	calcium channel, voltage-dependent, N type, alpha 1B subunit
chr2	24608134	24609057	-	24608131	24609057	A3SS	0.5	50	50	ENSMUST00000070864.14	ENSMUSG00000004113.19	Cacna1b	chr2	protein_coding	calcium channel, voltage-dependent, N type, alpha 1B subunit
chr2	24569655;24573050	24572988;24575780	-	24569655	24575780	cassetteExon	0.5	100	100	ENSMUST00000102939.9	ENSMUSG00000004113.19	Cacna1b	chr2	protein_coding	calcium channel, voltage-dependent, N type, alpha 1B subunit
chr2	24507798	24512611	-	24507798	24508267	5pMXE	0.5	50	50	ENSMUST00000133892.2	ENSMUSG00000004113.19	Cacna1b	chr2	protein_coding	calcium channel, voltage-dependent, N type, alpha 1B subunit
chr2	24512719;24516931	24516835;24521911	-	24512719	24521911	cassetteExon	0.5	100	100	ENSMUST00000125798.3	ENSMUSG00000004113.19	Cacna1b	chr2	protein_coding	calcium channel, voltage-dependent, N type, alpha 1B subunit
chr2	24729768	24737956	-	24729768;24730791	24730648;24737956	ES	0.5	50	50	ENSMUST00000147147.8	ENSMUSG00000036893.18	Ehmt1	chr2	protein_coding	euchromatic histone methyltransferase 1
chr2	24738101	24746618	-	24738101;24742814	24742677;24746618	ES	0.5	50	50	ENSMUST00000147147.8	ENSMUSG00000036893.18	Ehmt1	chr2	protein_coding	euchromatic histone methyltransferase 1
chr2	24746738	24753235	-	24746738;24748262	24748185;24753235	ES	0.5	50	50	ENSMUST00000147147.8	ENSMUSG00000036893.18	Ehmt1	chr2	protein_coding	euchromatic histone methyltransferase 1
chr2	24774714	24809566	-	24774714;24777081	24777015;24809566	ES	0.33	50	50	ENSMUST00000147147.8	ENSMUSG00000036893.18	Ehmt1	chr2	protein_coding	euchromatic histone methyltransferase 1
chr2	24713466	24714957	-	24705844	24714957	A3SS	0.5	50	50	ENSMUST00000147147.8	ENSMUSG00000036893.18	Ehmt1	chr2	protein_coding	euchromatic histone methyltransferase 1
chr2	24753917	24767467	-	24753941	24767467	A3SS	0.33	50	50	ENSMUST00000147147.8	ENSMUSG00000036893.18	Ehmt1	chr2	protein_coding	euchromatic histone methyltransferase 1
chr2	24753920	24767467	-	24753941	24767467	A3SS	0.33	50	50	ENSMUST00000147147.8	ENSMUSG00000036893.18	Ehmt1	chr2	protein_coding	euchromatic histone methyltransferase 1
chr2	24777078	24809566	-	24777081	24809566	A3SS	0.33	50	50	ENSMUST00000147147.8	ENSMUSG00000036893.18	Ehmt1	chr2	protein_coding	euchromatic histone methyltransferase 1
chr2	24694916	24695094	-	24694916	24695086	A5SS	0.5	50	50	ENSMUST00000147147.8	ENSMUSG00000036893.18	Ehmt1	chr2	protein_coding	euchromatic histone methyltransferase 1
chr2	24696380	24696920	-	24696380	24703539	A5SS	0.5	50	50	ENSMUST00000147147.8	ENSMUSG00000036893.18	Ehmt1	chr2	protein_coding	euchromatic histone methyltransferase 1
chr2	24705844	24714941	-	24705844	24714957	A5SS	0.5	50	50	ENSMUST00000147147.8	ENSMUSG00000036893.18	Ehmt1	chr2	protein_coding	euchromatic histone methyltransferase 1
chr2	24774714	24777009	-	24774714	24777015	A5SS	0.33	50	50	ENSMUST00000147147.8	ENSMUSG00000036893.18	Ehmt1	chr2	protein_coding	euchromatic histone methyltransferase 1
chr2	24777081	24781695	-	24777081	24809566	A5SS	0.5	50	50	ENSMUST00000147147.8	ENSMUSG00000036893.18	Ehmt1	chr2	protein_coding	euchromatic histone methyltransferase 1
chr2	24729768	24742677	-	24729768;24738101	24737956;24742677	ES	0.5	50	50	ENSMUST00000114418.10	ENSMUSG00000036893.18	Ehmt1	chr2	protein_coding	euchromatic histone methyltransferase 1
chr2	24729768;24742814	24742677;24746618	-	24729768;24738101	24730648;24746618	MXE	0.5	100	100	ENSMUST00000114432.9	ENSMUSG00000036893.18	Ehmt1	chr2	protein_coding	euchromatic histone methyltransferase 1
chr2	24753917	24767467	-	24753920	24767467	A3SS	0.33	50	50	ENSMUST00000114432.9	ENSMUSG00000036893.18	Ehmt1	chr2	protein_coding	euchromatic histone methyltransferase 1
chr2	24774714	24809566	-	24774714;24777078	24777015;24809566	ES	0.33	50	50	ENSMUST00000091348.11	ENSMUSG00000036893.18	Ehmt1	chr2	protein_coding	euchromatic histone methyltransferase 1
chr2	24774714;24777078	24777009;24809566	-	24774714	24809566	cassetteExon	0.5	100	100	ENSMUST00000200655.5	ENSMUSG00000036893.18	Ehmt1	chr2	protein_coding	euchromatic histone methyltransferase 1
chr2	24774714;24777081	24777009;24809566	-	24774714	24809566	cassetteExon	0.5	100	100	ENSMUST00000200655.5	ENSMUSG00000036893.18	Ehmt1	chr2	protein_coding	euchromatic histone methyltransferase 1
chr2	24729768	24730648	-	24729768	24742677	A5SS	0.33	50	50	ENSMUST00000150836.8	ENSMUSG00000036893.18	Ehmt1	chr2	protein_coding	euchromatic histone methyltransferase 1
chr2	24729768	24742677	-	24738101	24742677	3pMXE	0.5	50	50	ENSMUST00000207383.2	ENSMUSG00000036893.18	Ehmt1	chr2	protein_coding	euchromatic histone methyltransferase 1
chr2	24817188	24825040	-	24817188;24817851	24817741;24825040	ES	0.5	50	50	ENSMUST00000102935.10	ENSMUSG00000026972.16	Arrdc1	chr2	protein_coding	arrestin domain containing 1
chr2	24816460	24816557	-	24816457	24816557	A3SS	0.5	50	50	ENSMUST00000102935.10	ENSMUSG00000026972.16	Arrdc1	chr2	protein_coding	arrestin domain containing 1
chr2	24816958	24817138	-	24817044	24817138	A3SS	0.5	50	50	ENSMUST00000102935.10	ENSMUSG00000026972.16	Arrdc1	chr2	protein_coding	arrestin domain containing 1
chr2	24817038	24817741	-	24817188	24817741	A3SS&ES	0.33	50	50	ENSMUST00000102935.10	ENSMUSG00000026972.16	Arrdc1	chr2	protein_coding	arrestin domain containing 1
chr2	24817184	24817741	-	24817188	24817741	A3SS	0.33	50	50	ENSMUST00000102935.10	ENSMUSG00000026972.16	Arrdc1	chr2	protein_coding	arrestin domain containing 1
chr2	24817851	24818006	-	24817851	24825040	A5SS	0.5	50	50	ENSMUST00000102935.10	ENSMUSG00000026972.16	Arrdc1	chr2	protein_coding	arrestin domain containing 1
chr2	24816460	24816595	-	24816460	24816557	A5SS	0.33	50	50	ENSMUST00000028349.14	ENSMUSG00000026972.16	Arrdc1	chr2	protein_coding	arrestin domain containing 1
chr2	24816460	24816600	-	24816460	24816557	A5SS	0.33	50	50	ENSMUST00000028349.14	ENSMUSG00000026972.16	Arrdc1	chr2	protein_coding	arrestin domain containing 1
chr2	24816460	24816595	-	24816460	24816600	A5SS	0.33	50	50	ENSMUST00000155953.8	ENSMUSG00000026972.16	Arrdc1	chr2	protein_coding	arrestin domain containing 1
chr2	24817038	24817741	-	24817184	24817741	A3SS&ES	0.33	50	50	ENSMUST00000142887.8	ENSMUSG00000026972.16	Arrdc1	chr2	protein_coding	arrestin domain containing 1
chr2	24817188	24825040	-	24817851	24825040	A3SS&ES	0.5	50	50	ENSMUST00000142887.8	ENSMUSG00000026972.16	Arrdc1	chr2	protein_coding	arrestin domain containing 1
chr2	24817188	24825040	-	24817188	24817741	5pMXE	0.5	50	50	ENSMUST00000155525.8	ENSMUSG00000026972.16	Arrdc1	chr2	protein_coding	arrestin domain containing 1
chr2	24840486	24841485	+	24840059	24841485	A5SS	0.5	50	50	ENSMUST00000028350.9	ENSMUSG00000026974.12	Zmynd19	chr2	protein_coding	zinc finger, MYND domain containing 19
chr2	24853168	24855572	+	24853168;24853555	24853468;24855572	ES	0.5	50	50	ENSMUST00000028351.9	ENSMUSG00000026975.11	Dph7	chr2	protein_coding	diphthamine biosynethesis 7
chr2	24853555	24856514	+	24853555;24855666	24855572;24856514	ES	0.5	50	50	ENSMUST00000028351.9	ENSMUSG00000026975.11	Dph7	chr2	protein_coding	diphthamine biosynethesis 7
chr2	24855666	24858897	+	24855666;24856686	24856514;24858897	ES	0.5	50	50	ENSMUST00000028351.9	ENSMUSG00000026975.11	Dph7	chr2	protein_coding	diphthamine biosynethesis 7
chr2	24852637	24855569	+	24852637	24853035	A3SS&ES	0.5	50	50	ENSMUST00000028351.9	ENSMUSG00000026975.11	Dph7	chr2	protein_coding	diphthamine biosynethesis 7
chr2	24852822	24853035	+	24852637	24853035	A5SS	0.5	50	50	ENSMUST00000028351.9	ENSMUSG00000026975.11	Dph7	chr2	protein_coding	diphthamine biosynethesis 7
chr2	24853168;24853555	24853468;24856514	+	24853168;24855666	24855572;24856514	MXE	0.5	100	100	ENSMUST00000126909.8	ENSMUSG00000026975.11	Dph7	chr2	protein_coding	diphthamine biosynethesis 7
chr2	24853168;24855666	24855572;24858897	+	24853168;24856686	24853468;24858897	MXE	0.5	100	100	ENSMUST00000135339.8	ENSMUSG00000026975.11	Dph7	chr2	protein_coding	diphthamine biosynethesis 7
chr2	24853555;24855666	24855572;24858897	+	24853555;24856686	24856514;24858897	MXE	0.5	100	100	ENSMUST00000135339.8	ENSMUSG00000026975.11	Dph7	chr2	protein_coding	diphthamine biosynethesis 7
chr2	24855666	24858897	+	24855666	24856514	3pMXE	0.5	50	50	ENSMUST00000143253.8	ENSMUSG00000026975.11	Dph7	chr2	protein_coding	diphthamine biosynethesis 7
chr2	24853555	24856514	+	24855666	24856514	A5SS&ES	0.5	50	50	ENSMUST00000153375.8	ENSMUSG00000026975.11	Dph7	chr2	protein_coding	diphthamine biosynethesis 7
chr2	24853168	24855572	+	24853555	24855572	A5SS	0.5	50	50	ENSMUST00000146382.8	ENSMUSG00000026975.11	Dph7	chr2	protein_coding	diphthamine biosynethesis 7
chr2	24864693	24864788	-	24864693	24864900	A5SS	0.5	50	50	ENSMUST00000045604.4	ENSMUSG00000036850.5	Mrpl41	chr2	protein_coding	mitochondrial ribosomal protein L41
chr2	24866325;24868233	24868138;24870046	+	24866325	24870046	cassetteExon	0.5	100	100	ENSMUST00000045295.14	ENSMUSG00000036833.17	Pnpla7	chr2	protein_coding	patatin-like phospholipase domain containing 7
chr2	24866325;24869909	24869844;24870046	+	24866325	24870046	cassetteExon	0.5	100	100	ENSMUST00000045295.14	ENSMUSG00000036833.17	Pnpla7	chr2	protein_coding	patatin-like phospholipase domain containing 7
chr2	24942649;24943082	24943003;24943407	+	24942649	24943407	cassetteExon	0.5	100	100	ENSMUST00000045295.14	ENSMUSG00000036833.17	Pnpla7	chr2	protein_coding	patatin-like phospholipase domain containing 7
chr2	24873661	24877126	+	24873661	24877131	A3SS	0.5	50	50	ENSMUST00000045295.14	ENSMUSG00000036833.17	Pnpla7	chr2	protein_coding	patatin-like phospholipase domain containing 7
chr2	24877211	24877616	+	24877211	24885290	A3SS	0.5	50	50	ENSMUST00000045295.14	ENSMUSG00000036833.17	Pnpla7	chr2	protein_coding	patatin-like phospholipase domain containing 7
chr2	24887362	24888691	+	24887362	24888634	A3SS	0.5	50	50	ENSMUST00000045295.14	ENSMUSG00000036833.17	Pnpla7	chr2	protein_coding	patatin-like phospholipase domain containing 7
chr2	24866229	24870046	+	24866325	24870046	A5SS	0.25	50	50	ENSMUST00000045295.14	ENSMUSG00000036833.17	Pnpla7	chr2	protein_coding	patatin-like phospholipase domain containing 7
chr2	24866325	24870725	+	24870302	24870725	A5SS&ES	0.5	50	50	ENSMUST00000137913.8	ENSMUSG00000036833.17	Pnpla7	chr2	protein_coding	patatin-like phospholipase domain containing 7
chr2	24868233	24870046	+	24866229	24870046	A5SS	0.25	50	50	ENSMUST00000137913.8	ENSMUSG00000036833.17	Pnpla7	chr2	protein_coding	patatin-like phospholipase domain containing 7
chr2	24869909	24870046	+	24866229	24870046	A5SS	0.25	50	50	ENSMUST00000137913.8	ENSMUSG00000036833.17	Pnpla7	chr2	protein_coding	patatin-like phospholipase domain containing 7
chr2	24866325;24868233	24868138;24870046	+	24866325;24869909	24869844;24870046	MXE	0.5	100	100	ENSMUST00000153618.8	ENSMUSG00000036833.17	Pnpla7	chr2	protein_coding	patatin-like phospholipase domain containing 7
chr2	24866325;24870302	24869844;24870725	+	24866325	24870725	cassetteExon	0.5	100	100	ENSMUST00000152777.2	ENSMUSG00000036833.17	Pnpla7	chr2	protein_coding	patatin-like phospholipase domain containing 7
chr2	24866325;24870302	24870046;24870725	+	24866325	24870725	cassetteExon	0.5	100	100	ENSMUST00000152777.2	ENSMUSG00000036833.17	Pnpla7	chr2	protein_coding	patatin-like phospholipase domain containing 7
chr2	24866325	24868138	+	24866325	24870725	A3SS	0.25	50	50	ENSMUST00000152777.2	ENSMUSG00000036833.17	Pnpla7	chr2	protein_coding	patatin-like phospholipase domain containing 7
chr2	24945071	24947113	+	24945071;24946148	24945648;24947113	ES	0.5	50	50	ENSMUST00000100334.11	ENSMUSG00000006476.20	Nsmf	chr2	protein_coding	NMDA receptor synaptonuclear signaling and neuronal migration factor
chr2	24947188	24948265	+	24947188;24947982	24947977;24948265	ES	0.5	50	50	ENSMUST00000100334.11	ENSMUSG00000006476.20	Nsmf	chr2	protein_coding	NMDA receptor synaptonuclear signaling and neuronal migration factor
chr2	24947982	24949033	+	24947982;24948333	24948265;24949033	ES	0.25	50	50	ENSMUST00000100334.11	ENSMUSG00000006476.20	Nsmf	chr2	protein_coding	NMDA receptor synaptonuclear signaling and neuronal migration factor
chr2	24949085	24950151	+	24949085;24949706	24949617;24950151	ES	0.5	50	50	ENSMUST00000100334.11	ENSMUSG00000006476.20	Nsmf	chr2	protein_coding	NMDA receptor synaptonuclear signaling and neuronal migration factor
chr2	24949706	24950491	+	24949706;24950275	24950151;24950491	ES	0.5	50	50	ENSMUST00000100334.11	ENSMUSG00000006476.20	Nsmf	chr2	protein_coding	NMDA receptor synaptonuclear signaling and neuronal migration factor
chr2	24947188;24947289	24947284;24949033	+	24947188;24948333	24947977;24949033	MXE	0.5	100	100	ENSMUST00000100334.11	ENSMUSG00000006476.20	Nsmf	chr2	protein_coding	NMDA receptor synaptonuclear signaling and neuronal migration factor
chr2	24947188	24948241	+	24947188	24947977	A3SS&ES	0.2	50	50	ENSMUST00000100334.11	ENSMUSG00000006476.20	Nsmf	chr2	protein_coding	NMDA receptor synaptonuclear signaling and neuronal migration factor
chr2	24947188	24949033	+	24947188;24948333	24948265;24949033	ES	0.25	50	50	ENSMUST00000152122.8	ENSMUSG00000006476.20	Nsmf	chr2	protein_coding	NMDA receptor synaptonuclear signaling and neuronal migration factor
chr2	24947188;24947289	24947284;24949033	+	24947188;24948333	24948265;24949033	MXE	0.5	100	100	ENSMUST00000152122.8	ENSMUSG00000006476.20	Nsmf	chr2	protein_coding	NMDA receptor synaptonuclear signaling and neuronal migration factor
chr2	24947188;24947982	24947977;24949033	+	24947188;24948333	24948265;24949033	MXE	0.5	100	100	ENSMUST00000152122.8	ENSMUSG00000006476.20	Nsmf	chr2	protein_coding	NMDA receptor synaptonuclear signaling and neuronal migration factor
chr2	24947188	24948241	+	24947188	24948265	A3SS	0.2	50	50	ENSMUST00000152122.8	ENSMUSG00000006476.20	Nsmf	chr2	protein_coding	NMDA receptor synaptonuclear signaling and neuronal migration factor
chr2	24947188	24949033	+	24947188;24947289	24947284;24949033	ES	0.25	50	50	ENSMUST00000116574.10	ENSMUSG00000006476.20	Nsmf	chr2	protein_coding	NMDA receptor synaptonuclear signaling and neuronal migration factor
chr2	24947188;24947982	24947977;24949033	+	24947188;24947289	24947284;24949033	MXE	0.5	100	100	ENSMUST00000116574.10	ENSMUSG00000006476.20	Nsmf	chr2	protein_coding	NMDA receptor synaptonuclear signaling and neuronal migration factor
chr2	24947188;24948333	24948241;24949033	+	24947188;24947289	24947284;24949033	MXE	0.5	100	100	ENSMUST00000116574.10	ENSMUSG00000006476.20	Nsmf	chr2	protein_coding	NMDA receptor synaptonuclear signaling and neuronal migration factor
chr2	24945071	24947113	+	24945071	24945648	3pMXE	0.5	50	50	ENSMUST00000141866.3	ENSMUSG00000006476.20	Nsmf	chr2	protein_coding	NMDA receptor synaptonuclear signaling and neuronal migration factor
chr2	24947188	24949033	+	24947188;24947982	24947977;24949033	ES	0.25	50	50	ENSMUST00000102931.11	ENSMUSG00000006476.20	Nsmf	chr2	protein_coding	NMDA receptor synaptonuclear signaling and neuronal migration factor
chr2	24947188;24948333	24948241;24949033	+	24947188;24947982	24947977;24949033	MXE	0.5	100	100	ENSMUST00000102931.11	ENSMUSG00000006476.20	Nsmf	chr2	protein_coding	NMDA receptor synaptonuclear signaling and neuronal migration factor
chr2	24947188;24948333	24947977;24949033	+	24947188	24949033	cassetteExon	0.5	100	100	ENSMUST00000074422.14	ENSMUSG00000006476.20	Nsmf	chr2	protein_coding	NMDA receptor synaptonuclear signaling and neuronal migration factor
chr2	24947188;24948333	24948241;24949033	+	24947188	24949033	cassetteExon	0.5	100	100	ENSMUST00000074422.14	ENSMUSG00000006476.20	Nsmf	chr2	protein_coding	NMDA receptor synaptonuclear signaling and neuronal migration factor
chr2	24949085;24949706	24949617;24950491	+	24949085;24950275	24950151;24950491	MXE	0.5	100	100	ENSMUST00000114388.8	ENSMUSG00000006476.20	Nsmf	chr2	protein_coding	NMDA receptor synaptonuclear signaling and neuronal migration factor
chr2	24945071	24947113	+	24946148	24947113	5pMXE	0.5	50	50	ENSMUST00000135328.2	ENSMUSG00000006476.20	Nsmf	chr2	protein_coding	NMDA receptor synaptonuclear signaling and neuronal migration factor
chr2	24947188	24949033	+	24948333	24949033	5pMXE	0.25	50	50	ENSMUST00000140733.2	ENSMUSG00000006476.20	Nsmf	chr2	protein_coding	NMDA receptor synaptonuclear signaling and neuronal migration factor
chr2	24947289	24949033	+	24948333	24949033	5pMXE	0.25	50	50	ENSMUST00000140733.2	ENSMUSG00000006476.20	Nsmf	chr2	protein_coding	NMDA receptor synaptonuclear signaling and neuronal migration factor
chr2	24949085	24950151	+	24949085	24949617	3pMXE	0.5	50	50	ENSMUST00000140733.2	ENSMUSG00000006476.20	Nsmf	chr2	protein_coding	NMDA receptor synaptonuclear signaling and neuronal migration factor
chr2	24947982	24949033	+	24948333	24949033	A5SS	0.25	50	50	ENSMUST00000140733.2	ENSMUSG00000006476.20	Nsmf	chr2	protein_coding	NMDA receptor synaptonuclear signaling and neuronal migration factor
chr2	24970563	24973232	+	24970563	24971818	3pMXE	0.33	50	50	ENSMUST00000135004.2	ENSMUSG00000036813.12	Entpd8	chr2	protein_coding	ectonucleoside triphosphate diphosphohydrolase 8
chr2	24970563	24971823	+	24970563	24971818	A3SS	0.33	50	50	ENSMUST00000135004.2	ENSMUSG00000036813.12	Entpd8	chr2	protein_coding	ectonucleoside triphosphate diphosphohydrolase 8
chr2	24974100	24974738	+	24974100;24974383	24974273;24974738	ES	0.5	50	50	ENSMUST00000044078.10	ENSMUSG00000036813.12	Entpd8	chr2	protein_coding	ectonucleoside triphosphate diphosphohydrolase 8
chr2	24972162	24972978	+	24972162	24972940	A3SS	0.5	50	50	ENSMUST00000044078.10	ENSMUSG00000036813.12	Entpd8	chr2	protein_coding	ectonucleoside triphosphate diphosphohydrolase 8
chr2	24973391	24973680	+	24973391	24973510	A3SS	0.5	50	50	ENSMUST00000044078.10	ENSMUSG00000036813.12	Entpd8	chr2	protein_coding	ectonucleoside triphosphate diphosphohydrolase 8
chr2	24970563	24971823	+	24970563	24973232	A3SS	0.33	50	50	ENSMUST00000152326.8	ENSMUSG00000036813.12	Entpd8	chr2	protein_coding	ectonucleoside triphosphate diphosphohydrolase 8
chr2	24973090	24973232	+	24970563	24973232	A5SS	0.5	50	50	ENSMUST00000152326.8	ENSMUSG00000036813.12	Entpd8	chr2	protein_coding	ectonucleoside triphosphate diphosphohydrolase 8
chr2	24977039	24977142	-	24977039	24977166	A5SS	0.5	50	50	ENSMUST00000114373.8	ENSMUSG00000036805.14	Noxa1	chr2	protein_coding	NADPH oxidase activator 1
chr2	25033945	25034052	-	25012743	25034052	A3SS	0.5	50	50	ENSMUST00000123483.8	ENSMUSG00000087028.8	Gm13387	chr2	lncRNA	predicted gene 13387
chr2	25085674	25086604	-	25085937	25086604	A3SS	0.5	50	50	ENSMUST00000081869.7	ENSMUSG00000059555.7	Tor4a	chr2	protein_coding	torsin family 4, member A
chr2	25085937	25086558	-	25085937	25086604	A5SS	0.5	50	50	ENSMUST00000081869.7	ENSMUSG00000059555.7	Tor4a	chr2	protein_coding	torsin family 4, member A
chr2	25093994	25095139	-	25093994;25094312	25094210;25095139	ES	0.5	50	50	ENSMUST00000059849.15	ENSMUSG00000013465.20	Nelfb	chr2	protein_coding	negative elongation factor complex member B
chr2	25096357	25100450	-	25096357;25100096	25099866;25100450	ES	0.5	50	50	ENSMUST00000059849.15	ENSMUSG00000013465.20	Nelfb	chr2	protein_coding	negative elongation factor complex member B
chr2	25093424	25093899	-	25093502	25093899	A3SS	0.5	50	50	ENSMUST00000059849.15	ENSMUSG00000013465.20	Nelfb	chr2	protein_coding	negative elongation factor complex member B
chr2	25096357	25100450	-	25096357	25099866	5pMXE	0.5	50	50	ENSMUST00000138199.8	ENSMUSG00000013465.20	Nelfb	chr2	protein_coding	negative elongation factor complex member B
chr2	25103931	25104248	-	25104154	25104248	A3SS	0.5	50	50	ENSMUST00000124661.8	ENSMUSG00000036770.12	Stpg3	chr2	protein_coding	sperm tail PG rich repeat containing 3
chr2	25103931	25104248	-	25103931;25104154	25104020;25104248	ES	0.5	50	50	ENSMUST00000043774.11	ENSMUSG00000036770.12	Stpg3	chr2	protein_coding	sperm tail PG rich repeat containing 3
chr2	25111425	25112095	+	25111425;25111793	25111676;25112095	ES	0.5	50	50	ENSMUST00000028346.4	ENSMUSG00000026969.4	Fam166a	chr2	protein_coding	family with sequence similarity 166, member A
chr2	25123066;25123717	25123573;25124192	-	25123066;25123438	25123315;25124192	MXE	0.5	100	100	ENSMUST00000006638.8	ENSMUSG00000006469.14	Slc34a3	chr2	protein_coding	solute carrier family 34 (sodium phosphate), member 3
chr2	25123438;25123717	25123573;25124192	-	25123438	25124192	cassetteExon	0.5	100	100	ENSMUST00000006638.8	ENSMUSG00000006469.14	Slc34a3	chr2	protein_coding	solute carrier family 34 (sodium phosphate), member 3
chr2	25122074	25122159	-	25121155	25122159	A3SS	0.5	50	50	ENSMUST00000124146.8	ENSMUSG00000006469.14	Slc34a3	chr2	protein_coding	solute carrier family 34 (sodium phosphate), member 3
chr2	25121155	25121235	-	25121155	25122159	A5SS	0.5	50	50	ENSMUST00000124146.8	ENSMUSG00000006469.14	Slc34a3	chr2	protein_coding	solute carrier family 34 (sodium phosphate), member 3
chr2	25123066	25123573	-	25123090	25123573	A3SS	0.2	50	50	ENSMUST00000155420.8	ENSMUSG00000006469.14	Slc34a3	chr2	protein_coding	solute carrier family 34 (sodium phosphate), member 3
chr2	25123372	25123573	-	25123090	25123573	A3SS	0.2	50	50	ENSMUST00000155420.8	ENSMUSG00000006469.14	Slc34a3	chr2	protein_coding	solute carrier family 34 (sodium phosphate), member 3
chr2	25123438	25123573	-	25123090	25123573	A3SS	0.2	50	50	ENSMUST00000155420.8	ENSMUSG00000006469.14	Slc34a3	chr2	protein_coding	solute carrier family 34 (sodium phosphate), member 3
chr2	25123438	25124192	-	25123717	25124192	A3SS&ES	0.5	50	50	ENSMUST00000155420.8	ENSMUSG00000006469.14	Slc34a3	chr2	protein_coding	solute carrier family 34 (sodium phosphate), member 3
chr2	25123441	25123573	-	25123090	25123573	A3SS	0.2	50	50	ENSMUST00000155420.8	ENSMUSG00000006469.14	Slc34a3	chr2	protein_coding	solute carrier family 34 (sodium phosphate), member 3
chr2	25123066	25123573	-	25123066;25123372	25123315;25123573	ES	0.2	50	50	ENSMUST00000144884.8	ENSMUSG00000006469.14	Slc34a3	chr2	protein_coding	solute carrier family 34 (sodium phosphate), member 3
chr2	25123438	25123573	-	25123372	25123573	A3SS	0.2	50	50	ENSMUST00000144884.8	ENSMUSG00000006469.14	Slc34a3	chr2	protein_coding	solute carrier family 34 (sodium phosphate), member 3
chr2	25123441	25123573	-	25123372	25123573	A3SS	0.2	50	50	ENSMUST00000144884.8	ENSMUSG00000006469.14	Slc34a3	chr2	protein_coding	solute carrier family 34 (sodium phosphate), member 3
chr2	25123066;25123438	25123315;25123573	-	25123066	25123573	cassetteExon	0.5	100	100	ENSMUST00000137482.8	ENSMUSG00000006469.14	Slc34a3	chr2	protein_coding	solute carrier family 34 (sodium phosphate), member 3
chr2	25123066;25123441	25123315;25123573	-	25123066	25123573	cassetteExon	0.5	100	100	ENSMUST00000137482.8	ENSMUSG00000006469.14	Slc34a3	chr2	protein_coding	solute carrier family 34 (sodium phosphate), member 3
chr2	25123441	25123573	-	25123438	25123573	A3SS	0.2	50	50	ENSMUST00000152997.8	ENSMUSG00000006469.14	Slc34a3	chr2	protein_coding	solute carrier family 34 (sodium phosphate), member 3
chr2	25129518	25132306	-	25129518	25129817	5pMXE	0.5	50	50	ENSMUST00000043379.5	ENSMUSG00000036731.8	Cysrt1	chr2	protein_coding	cysteine rich tail 1
chr2	25140015;25140209	25140108;25141733	-	25140015	25141733	cassetteExon	0.5	100	100	ENSMUST00000100329.10	ENSMUSG00000006471.19	Ndor1	chr2	protein_coding	NADPH dependent diflavin oxidoreductase 1
chr2	25140015;25140390	25140108;25141733	-	25140015	25141733	cassetteExon	0.5	100	100	ENSMUST00000100329.10	ENSMUSG00000006471.19	Ndor1	chr2	protein_coding	NADPH dependent diflavin oxidoreductase 1
chr2	25136607	25138134	-	25138066	25138134	A3SS&ES	0.5	50	50	ENSMUST00000100329.10	ENSMUSG00000006471.19	Ndor1	chr2	protein_coding	NADPH dependent diflavin oxidoreductase 1
chr2	25145039	25145229	-	25144953	25145229	A3SS	0.5	50	50	ENSMUST00000100329.10	ENSMUSG00000006471.19	Ndor1	chr2	protein_coding	NADPH dependent diflavin oxidoreductase 1
chr2	25144953	25145162	-	25144953	25145229	A5SS	0.5	50	50	ENSMUST00000100329.10	ENSMUSG00000006471.19	Ndor1	chr2	protein_coding	NADPH dependent diflavin oxidoreductase 1
chr2	25140209	25141733	-	25140209;25140390	25140292;25141733	ES	0.33	50	50	ENSMUST00000114349.9	ENSMUSG00000006471.19	Ndor1	chr2	protein_coding	NADPH dependent diflavin oxidoreductase 1
chr2	25145039	25145162	-	25145039	25145229	A5SS	0.5	50	50	ENSMUST00000148589.9	ENSMUSG00000006471.19	Ndor1	chr2	protein_coding	NADPH dependent diflavin oxidoreductase 1
chr2	25140209	25141733	-	25140209	25140292	5pMXE	0.5	50	50	ENSMUST00000123472.2	ENSMUSG00000006471.19	Ndor1	chr2	protein_coding	NADPH dependent diflavin oxidoreductase 1
chr2	25144953	25145162	-	25145039	25145162	A3SS	0.5	50	50	ENSMUST00000147866.2	ENSMUSG00000006471.19	Ndor1	chr2	protein_coding	NADPH dependent diflavin oxidoreductase 1
chr2	25157633	25158844	+	25154565	25158844	A5SS	0.5	50	50	ENSMUST00000114336.4	ENSMUSG00000048707.10	Tprn	chr2	protein_coding	taperin
chr2	25162140	25162310	-	25162140	25162321	A5SS	0.5	50	50	ENSMUST00000133697.2	ENSMUSG00000026966.7	Ssna1	chr2	protein_coding	SS nuclear autoantigen 1
chr2	25163549	25164678	+	25163549;25163944	25163812;25164678	ES	0.5	50	50	ENSMUST00000028341.11	ENSMUSG00000026965.13	Anapc2	chr2	protein_coding	anaphase promoting complex subunit 2
chr2	25163549	25164678	+	25163944	25164678	A5SS	0.5	50	50	ENSMUST00000129265.2	ENSMUSG00000026965.13	Anapc2	chr2	protein_coding	anaphase promoting complex subunit 2
chr2	25178274	25178777	+	25178274;25178564	25178429;25178777	ES	0.5	50	50	ENSMUST00000028340.4	ENSMUSG00000026963.5	Tmem210	chr2	protein_coding	transmembrane protein 210
chr2	25182140	25185804	-	25182140;25184560	25184450;25185804	ES	0.25	50	50	ENSMUST00000114318.10	ENSMUSG00000026959.14	Grin1	chr2	protein_coding	glutamate receptor, ionotropic, NMDA1 (zeta 1)
chr2	25200487	25203440	-	25200487;25201417	25201355;25203440	ES	0.5	50	50	ENSMUST00000114318.10	ENSMUSG00000026959.14	Grin1	chr2	protein_coding	glutamate receptor, ionotropic, NMDA1 (zeta 1)
chr2	25182137	25185804	-	25184560	25185804	A3SS&ES	0.25	50	50	ENSMUST00000114318.10	ENSMUSG00000026959.14	Grin1	chr2	protein_coding	glutamate receptor, ionotropic, NMDA1 (zeta 1)
chr2	25182496	25184450	-	25182140	25184450	A3SS	0.5	50	50	ENSMUST00000114318.10	ENSMUSG00000026959.14	Grin1	chr2	protein_coding	glutamate receptor, ionotropic, NMDA1 (zeta 1)
chr2	25182496	25185804	-	25184560	25185804	A3SS&ES	0.25	50	50	ENSMUST00000114318.10	ENSMUSG00000026959.14	Grin1	chr2	protein_coding	glutamate receptor, ionotropic, NMDA1 (zeta 1)
chr2	25182496	25185804	-	25182496;25184560	25184450;25185804	ES	0.25	50	50	ENSMUST00000114310.10	ENSMUSG00000026959.14	Grin1	chr2	protein_coding	glutamate receptor, ionotropic, NMDA1 (zeta 1)
chr2	25182140	25185804	-	25184560	25185804	A3SS&ES	0.25	50	50	ENSMUST00000114310.10	ENSMUSG00000026959.14	Grin1	chr2	protein_coding	glutamate receptor, ionotropic, NMDA1 (zeta 1)
chr2	25182137	25185804	-	25182496	25185804	A3SS	0.25	50	50	ENSMUST00000114308.10	ENSMUSG00000026959.14	Grin1	chr2	protein_coding	glutamate receptor, ionotropic, NMDA1 (zeta 1)
chr2	25182140	25185804	-	25182496	25185804	A3SS	0.25	50	50	ENSMUST00000114308.10	ENSMUSG00000026959.14	Grin1	chr2	protein_coding	glutamate receptor, ionotropic, NMDA1 (zeta 1)
chr2	25182137	25185804	-	25182140	25185804	A3SS	0.25	50	50	ENSMUST00000114317.10	ENSMUSG00000026959.14	Grin1	chr2	protein_coding	glutamate receptor, ionotropic, NMDA1 (zeta 1)
chr2	25223555	25228125	+	25223555;25224504	25224389;25228125	ES	0.5	50	50	ENSMUST00000136245.8	ENSMUSG00000036646.14	Man1b1	chr2	protein_coding	mannosidase, alpha, class 1B, member 1
chr2	25222988	25223447	+	25222594	25223447	A5SS	0.5	50	50	ENSMUST00000136245.8	ENSMUSG00000036646.14	Man1b1	chr2	protein_coding	mannosidase, alpha, class 1B, member 1
chr2	25243528;25243738	25243620;25244245	-	25243528	25244245	cassetteExon	0.5	100	100	ENSMUST00000139108.8	ENSMUSG00000026958.14	Dpp7	chr2	protein_coding	dipeptidylpeptidase 7
chr2	25244646	25245570	-	25244646	25244753	A5SS&ES	0.5	50	50	ENSMUST00000139108.8	ENSMUSG00000026958.14	Dpp7	chr2	protein_coding	dipeptidylpeptidase 7
chr2	25244834	25245570	-	25244834	25244905	A5SS	0.5	50	50	ENSMUST00000139108.8	ENSMUSG00000026958.14	Dpp7	chr2	protein_coding	dipeptidylpeptidase 7
chr2	25245733	25245822	-	25245733	25245826	A5SS	0.5	50	50	ENSMUST00000139108.8	ENSMUSG00000026958.14	Dpp7	chr2	protein_coding	dipeptidylpeptidase 7
chr2	25244834	25245570	-	25244834;25245040	25244905;25245570	ES	0.33	50	50	ENSMUST00000028332.8	ENSMUSG00000026958.14	Dpp7	chr2	protein_coding	dipeptidylpeptidase 7
chr2	25244646;25244834	25244753;25245570	-	25244646	25245570	cassetteExon	0.5	100	100	ENSMUST00000133253.8	ENSMUSG00000026958.14	Dpp7	chr2	protein_coding	dipeptidylpeptidase 7
chr2	25244646;25245040	25244753;25245570	-	25244646	25245570	cassetteExon	0.5	100	100	ENSMUST00000133253.8	ENSMUSG00000026958.14	Dpp7	chr2	protein_coding	dipeptidylpeptidase 7
chr2	25244646	25245570	-	25245040	25245570	3pMXE	0.33	50	50	ENSMUST00000135473.2	ENSMUSG00000026958.14	Dpp7	chr2	protein_coding	dipeptidylpeptidase 7
chr2	25244834	25245570	-	25245040	25245570	3pMXE	0.33	50	50	ENSMUST00000135473.2	ENSMUSG00000026958.14	Dpp7	chr2	protein_coding	dipeptidylpeptidase 7
chr2	25254699	25255339	-	25254699;25255097	25254893;25255339	ES	0.5	50	50	ENSMUST00000102925.4	ENSMUSG00000026956.16	Uap1l1	chr2	protein_coding	UDP-N-acteylglucosamine pyrophosphorylase 1-like 1
chr2	25253841	25254113	-	25254011	25254113	A3SS	0.33	50	50	ENSMUST00000102925.4	ENSMUSG00000026956.16	Uap1l1	chr2	protein_coding	UDP-N-acteylglucosamine pyrophosphorylase 1-like 1
chr2	25253869	25254113	-	25254011	25254113	A3SS	0.33	50	50	ENSMUST00000102925.4	ENSMUSG00000026956.16	Uap1l1	chr2	protein_coding	UDP-N-acteylglucosamine pyrophosphorylase 1-like 1
chr2	25252149	25252662	-	25252149	25252675	A5SS	0.5	50	50	ENSMUST00000102925.4	ENSMUSG00000026956.16	Uap1l1	chr2	protein_coding	UDP-N-acteylglucosamine pyrophosphorylase 1-like 1
chr2	25252860	25253324	-	25252860	25253256	A5SS	0.5	50	50	ENSMUST00000102925.4	ENSMUSG00000026956.16	Uap1l1	chr2	protein_coding	UDP-N-acteylglucosamine pyrophosphorylase 1-like 1
chr2	25253841	25254113	-	25253869	25254113	A3SS	0.33	50	50	ENSMUST00000131025.2	ENSMUSG00000026956.16	Uap1l1	chr2	protein_coding	UDP-N-acteylglucosamine pyrophosphorylase 1-like 1
chr2	25263010	25264964	+	25263010;25263529	25263428;25264964	ES	0.5	50	50	ENSMUST00000028329.13	ENSMUSG00000026955.14	Sapcd2	chr2	protein_coding	suppressor APC domain containing 2
chr2	25265076	25265570	+	25265076	25265697	A3SS	0.5	50	50	ENSMUST00000028329.13	ENSMUSG00000026955.14	Sapcd2	chr2	protein_coding	suppressor APC domain containing 2
chr2	25288163	25288544	+	25288163;25288462	25288303;25288544	ES	0.5	50	50	ENSMUST00000028328.3	ENSMUSG00000015085.9	Entpd2	chr2	protein_coding	ectonucleoside triphosphate diphosphohydrolase 2
chr2	25290710	25296227	+	25290710	25290782	3pMXE	0.5	50	50	ENSMUST00000028328.3	ENSMUSG00000015085.9	Entpd2	chr2	protein_coding	ectonucleoside triphosphate diphosphohydrolase 2
chr2	25290710	25296227	+	25290710;25290952	25290782;25296227	ES	0.25	50	50	ENSMUST00000124277.2	ENSMUSG00000015094.17	Npdc1	chr2	protein_coding	neural proliferation, differentiation and control 1
chr2	25293377	25296227	+	25290952	25296227	A5SS	0.25	50	50	ENSMUST00000124277.2	ENSMUSG00000015094.17	Npdc1	chr2	protein_coding	neural proliferation, differentiation and control 1
chr2	25293653	25296227	+	25290952	25296227	A5SS	0.25	50	50	ENSMUST00000124277.2	ENSMUSG00000015094.17	Npdc1	chr2	protein_coding	neural proliferation, differentiation and control 1
chr2	25296373	25296771	+	25296373	25297608	A3SS	0.25	50	50	ENSMUST00000132287.8	ENSMUSG00000015094.17	Npdc1	chr2	protein_coding	neural proliferation, differentiation and control 1
chr2	25296373	25297475	+	25296373	25297608	A3SS	0.25	50	50	ENSMUST00000132287.8	ENSMUSG00000015094.17	Npdc1	chr2	protein_coding	neural proliferation, differentiation and control 1
chr2	25296373	25297484	+	25296373	25297608	A3SS	0.25	50	50	ENSMUST00000132287.8	ENSMUSG00000015094.17	Npdc1	chr2	protein_coding	neural proliferation, differentiation and control 1
chr2	25297748	25297856	+	25297748	25297853	A3SS	0.5	50	50	ENSMUST00000132287.8	ENSMUSG00000015094.17	Npdc1	chr2	protein_coding	neural proliferation, differentiation and control 1
chr2	25298026	25298096	+	25298026	25298126	A3SS	0.5	50	50	ENSMUST00000132287.8	ENSMUSG00000015094.17	Npdc1	chr2	protein_coding	neural proliferation, differentiation and control 1
chr2	25293377	25296227	+	25290710	25296227	A5SS	0.25	50	50	ENSMUST00000132287.8	ENSMUSG00000015094.17	Npdc1	chr2	protein_coding	neural proliferation, differentiation and control 1
chr2	25293653	25296227	+	25290710	25296227	A5SS	0.25	50	50	ENSMUST00000132287.8	ENSMUSG00000015094.17	Npdc1	chr2	protein_coding	neural proliferation, differentiation and control 1
chr2	25293653	25296227	+	25293377	25296227	A5SS	0.25	50	50	ENSMUST00000071442.12	ENSMUSG00000015094.17	Npdc1	chr2	protein_coding	neural proliferation, differentiation and control 1
chr2	25298988	25299111	+	25299013	25299111	A5SS	0.5	50	50	ENSMUST00000071442.12	ENSMUSG00000015094.17	Npdc1	chr2	protein_coding	neural proliferation, differentiation and control 1
chr2	25296373	25296771	+	25296373	25297484	A3SS	0.25	50	50	ENSMUST00000154809.8	ENSMUSG00000015094.17	Npdc1	chr2	protein_coding	neural proliferation, differentiation and control 1
chr2	25296373	25297475	+	25296373	25297484	A3SS	0.25	50	50	ENSMUST00000154809.8	ENSMUSG00000015094.17	Npdc1	chr2	protein_coding	neural proliferation, differentiation and control 1
chr2	25296373	25296771	+	25296373	25297475	A3SS	0.25	50	50	ENSMUST00000055921.14	ENSMUSG00000015094.17	Npdc1	chr2	protein_coding	neural proliferation, differentiation and control 1
chr2	25313980	25314898	+	25313980;25314790	25314706;25314898	ES	0.5	50	50	ENSMUST00000134259.8	ENSMUSG00000036587.14	Fut7	chr2	protein_coding	fucosyltransferase 7
chr2	25313980	25314585	+	25313980	25314706	A3SS	0.33	50	50	ENSMUST00000134259.8	ENSMUSG00000036587.14	Fut7	chr2	protein_coding	fucosyltransferase 7
chr2	25313980;25314790	25314585;25314898	+	25313980	25314898	cassetteExon	0.5	100	100	ENSMUST00000100320.5	ENSMUSG00000036587.14	Fut7	chr2	protein_coding	fucosyltransferase 7
chr2	25313980	25314898	+	25314790	25314898	5pMXE	0.5	50	50	ENSMUST00000142156.2	ENSMUSG00000036587.14	Fut7	chr2	protein_coding	fucosyltransferase 7
chr2	25335437	25335982	+	25335437;25335740	25335562;25335982	ES	0.5	50	50	ENSMUST00000102919.4	ENSMUSG00000026944.19	Abca2	chr2	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 2
chr2	25332066	25332203	+	25332123	25332203	A5SS	0.5	50	50	ENSMUST00000102919.4	ENSMUSG00000026944.19	Abca2	chr2	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 2
chr2	25335437	25335982	+	25335740	25335982	5pMXE	0.5	50	50	ENSMUST00000149385.8	ENSMUSG00000026944.19	Abca2	chr2	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 2
chr2	25345660;25349871	25349787;25350021	-	25345660	25350021	cassetteExon	0.5	100	100	ENSMUST00000132596.8	ENSMUSG00000047617.12	Paxx	chr2	protein_coding	non-homologous end joining factor
chr2	25345660;25349871	25349787;25350179	-	25345660;25350086	25350021;25350179	MXE	0.5	100	100	ENSMUST00000132596.8	ENSMUSG00000047617.12	Paxx	chr2	protein_coding	non-homologous end joining factor
chr2	25345660;25349927	25349787;25350021	-	25345660	25350021	cassetteExon	0.5	100	100	ENSMUST00000132596.8	ENSMUSG00000047617.12	Paxx	chr2	protein_coding	non-homologous end joining factor
chr2	25349713	25349787	-	25345660	25349787	A3SS	0.5	50	50	ENSMUST00000133919.8	ENSMUSG00000047617.12	Paxx	chr2	protein_coding	non-homologous end joining factor
chr2	25349871	25350021	-	25349927	25350021	A3SS	0.33	50	50	ENSMUST00000133919.8	ENSMUSG00000047617.12	Paxx	chr2	protein_coding	non-homologous end joining factor
chr2	25349871	25350179	-	25350086	25350179	A3SS&ES	0.5	50	50	ENSMUST00000133919.8	ENSMUSG00000047617.12	Paxx	chr2	protein_coding	non-homologous end joining factor
chr2	25350506	25350634	-	25350506	25350667	A5SS	0.33	50	50	ENSMUST00000133919.8	ENSMUSG00000047617.12	Paxx	chr2	protein_coding	non-homologous end joining factor
chr2	25350506	25350799	-	25350506	25350667	A5SS	0.33	50	50	ENSMUST00000133919.8	ENSMUSG00000047617.12	Paxx	chr2	protein_coding	non-homologous end joining factor
chr2	25349871	25350179	-	25349871;25350086	25350021;25350179	ES	0.5	50	50	ENSMUST00000114261.9	ENSMUSG00000047617.12	Paxx	chr2	protein_coding	non-homologous end joining factor
chr2	25350506	25350799	-	25350506;25350727	25350667;25350799	ES	0.5	50	50	ENSMUST00000114261.9	ENSMUSG00000047617.12	Paxx	chr2	protein_coding	non-homologous end joining factor
chr2	25350506;25350727	25350634;25350799	-	25350506	25350799	cassetteExon	0.5	100	100	ENSMUST00000135915.8	ENSMUSG00000047617.12	Paxx	chr2	protein_coding	non-homologous end joining factor
chr2	25345660	25350021	-	25349871	25350021	3pMXE	0.33	50	50	ENSMUST00000141613.8	ENSMUSG00000047617.12	Paxx	chr2	protein_coding	non-homologous end joining factor
chr2	25350506	25350799	-	25350506	25350634	5pMXE	0.33	50	50	ENSMUST00000130130.8	ENSMUSG00000047617.12	Paxx	chr2	protein_coding	non-homologous end joining factor
chr2	25349871	25350179	-	25349871	25350021	A5SS	0.5	50	50	ENSMUST00000130130.8	ENSMUSG00000047617.12	Paxx	chr2	protein_coding	non-homologous end joining factor
chr2	25350506	25350799	-	25350727	25350799	A3SS	0.5	50	50	ENSMUST00000123986.2	ENSMUSG00000047617.12	Paxx	chr2	protein_coding	non-homologous end joining factor
chr2	25346920	25347673	+	25346926	25347673	A5SS	0.5	50	50	ENSMUST00000140022.8	ENSMUSG00000015093.16	Clic3	chr2	protein_coding	chloride intracellular channel 3
chr2	25347986	25348127	+	25348002	25348127	A5SS	0.5	50	50	ENSMUST00000140022.8	ENSMUSG00000015093.16	Clic3	chr2	protein_coding	chloride intracellular channel 3
chr2	25356843	25357299	-	25356843	25357332	A5SS	0.5	50	50	ENSMUST00000114259.3	ENSMUSG00000015090.14	Ptgds	chr2	protein_coding	prostaglandin D2 synthase (brain)
chr2	25389127	25389601	-	25389127;25389517	25389410;25389601	ES	0.5	50	50	ENSMUST00000040042.11	ENSMUSG00000015083.12	C8g	chr2	protein_coding	complement component 8, gamma polypeptide
chr2	25389517	25389851	-	25389517;25389671	25389601;25389851	ES	0.5	50	50	ENSMUST00000040042.11	ENSMUSG00000015083.12	C8g	chr2	protein_coding	complement component 8, gamma polypeptide
chr2	25389987	25391540	-	25389987	25390106	5pMXE	0.5	50	50	ENSMUST00000040042.11	ENSMUSG00000015083.12	C8g	chr2	protein_coding	complement component 8, gamma polypeptide
chr2	25388723	25389026	-	25388955	25389026	A3SS&ES	0.5	50	50	ENSMUST00000040042.11	ENSMUSG00000015083.12	C8g	chr2	protein_coding	complement component 8, gamma polypeptide
chr2	25389127	25389601	-	25389127	25389410	5pMXE	0.5	50	50	ENSMUST00000150580.2	ENSMUSG00000015083.12	C8g	chr2	protein_coding	complement component 8, gamma polypeptide
chr2	25389127;25389517	25389410;25389851	-	25389127;25389671	25389601;25389851	MXE	0.5	100	100	ENSMUST00000153139.8	ENSMUSG00000015083.12	C8g	chr2	protein_coding	complement component 8, gamma polypeptide
chr2	25392163	25392883	+	25392163;25392570	25392413;25392883	ES	0.5	50	50	ENSMUST00000015239.10	ENSMUSG00000015095.13	Fbxw5	chr2	protein_coding	F-box and WD-40 domain protein 5
chr2	25393057	25393449	+	25393057;25393285	25393137;25393449	ES	0.5	50	50	ENSMUST00000015239.10	ENSMUSG00000015095.13	Fbxw5	chr2	protein_coding	F-box and WD-40 domain protein 5
chr2	25390898	25392044	+	25390898	25391948	A3SS	0.5	50	50	ENSMUST00000015239.10	ENSMUSG00000015095.13	Fbxw5	chr2	protein_coding	F-box and WD-40 domain protein 5
chr2	25392570	25392869	+	25392570	25392883	A3SS	0.5	50	50	ENSMUST00000015239.10	ENSMUSG00000015095.13	Fbxw5	chr2	protein_coding	F-box and WD-40 domain protein 5
chr2	25393653	25394192	+	25393878	25394192	A5SS	0.5	50	50	ENSMUST00000015239.10	ENSMUSG00000015095.13	Fbxw5	chr2	protein_coding	F-box and WD-40 domain protein 5
chr2	25393057	25393449	+	25393057	25393137	3pMXE	0.5	50	50	ENSMUST00000142004.8	ENSMUSG00000015095.13	Fbxw5	chr2	protein_coding	F-box and WD-40 domain protein 5
chr2	25392163	25392883	+	25392163	25392413	A3SS&ES	0.5	50	50	ENSMUST00000142004.8	ENSMUSG00000015095.13	Fbxw5	chr2	protein_coding	F-box and WD-40 domain protein 5
chr2	25393057	25393449	+	25393285	25393449	A5SS	0.5	50	50	ENSMUST00000135456.2	ENSMUSG00000015095.13	Fbxw5	chr2	protein_coding	F-box and WD-40 domain protein 5
chr2	25427161	25428857	-	25427161	25428878	A5SS	0.5	50	50	ENSMUST00000028311.13	ENSMUSG00000026942.14	Traf2	chr2	protein_coding	TNF receptor-associated factor 2
chr2	25448178	25450163	+	25448041	25450163	A5SS	0.5	50	50	ENSMUST00000015236.4	ENSMUSG00000015092.10	Edf1	chr2	protein_coding	endothelial differentiation-related factor 1
chr2	25460279	25461184	-	25460291	25461184	A3SS	0.5	50	50	ENSMUST00000095117.10	ENSMUSG00000026941.17	Mamdc4	chr2	protein_coding	MAM domain containing 4
chr2	25458779	25458940	-	25458779	25458971	A5SS	0.5	50	50	ENSMUST00000095117.10	ENSMUSG00000026941.17	Mamdc4	chr2	protein_coding	MAM domain containing 4
chr2	25456580;25457040	25456724;25457139	-	25456580	25457139	cassetteExon	0.5	100	100	ENSMUST00000152237.2	ENSMUSG00000026941.17	Mamdc4	chr2	protein_coding	MAM domain containing 4
chr2	25464461	25464695	-	25464324	25464695	A3SS	0.5	50	50	ENSMUST00000142811.2	ENSMUSG00000026941.17	Mamdc4	chr2	protein_coding	MAM domain containing 4
chr2	25488204	25491363	-	25488209	25491363	A3SS	0.5	50	50	ENSMUST00000058137.9	ENSMUSG00000015087.15	Rabl6	chr2	protein_coding	RAB, member RAS oncogene family-like 6
chr2	25492562	25498125	-	25492567	25498125	A3SS	0.5	50	50	ENSMUST00000058137.9	ENSMUSG00000015087.15	Rabl6	chr2	protein_coding	RAB, member RAS oncogene family-like 6
chr2	25486536	25488140	-	25486536	25488157	A5SS	0.5	50	50	ENSMUST00000058137.9	ENSMUSG00000015087.15	Rabl6	chr2	protein_coding	RAB, member RAS oncogene family-like 6
chr2	25507200	25515282	+	25499481	25515282	A5SS	0.5	50	50	ENSMUST00000155684.8	ENSMUSG00000052403.12	Fcnaos	chr2	lncRNA	ficolin A, opposite strand
chr2	25521312	25521651	+	25521274	25521651	A5SS	0.5	50	50	ENSMUST00000155684.8	ENSMUSG00000052403.12	Fcnaos	chr2	lncRNA	ficolin A, opposite strand
chr2	25511470	25511946	-	25511470;25511686	25511620;25511946	ES	0.5	50	50	ENSMUST00000028308.11	ENSMUSG00000026939.13	Tmem141	chr2	protein_coding	transmembrane protein 141
chr2	25511185	25511387	-	25511179	25511387	A3SS	0.5	50	50	ENSMUST00000028308.11	ENSMUSG00000026939.13	Tmem141	chr2	protein_coding	transmembrane protein 141
chr2	25511185	25511620	-	25511470	25511620	A3SS&ES	0.33	50	50	ENSMUST00000028308.11	ENSMUSG00000026939.13	Tmem141	chr2	protein_coding	transmembrane protein 141
chr2	25511540	25511620	-	25511470	25511620	A3SS	0.33	50	50	ENSMUST00000028308.11	ENSMUSG00000026939.13	Tmem141	chr2	protein_coding	transmembrane protein 141
chr2	25511185	25511620	-	25511185;25511470	25511387;25511620	ES	0.33	50	50	ENSMUST00000142087.2	ENSMUSG00000026939.13	Tmem141	chr2	protein_coding	transmembrane protein 141
chr2	25511185	25511373	-	25511185	25511387	A5SS	0.33	50	50	ENSMUST00000142087.2	ENSMUSG00000026939.13	Tmem141	chr2	protein_coding	transmembrane protein 141
chr2	25511470	25511946	-	25511470	25511620	A5SS	0.5	50	50	ENSMUST00000150165.8	ENSMUSG00000026939.13	Tmem141	chr2	protein_coding	transmembrane protein 141
chr2	25511185	25511620	-	25511185;25511470	25511373;25511620	ES	0.33	50	50	ENSMUST00000128149.2	ENSMUSG00000026939.13	Tmem141	chr2	protein_coding	transmembrane protein 141
chr2	25511185;25511470	25511373;25511946	-	25511185;25511686	25511620;25511946	MXE	0.5	100	100	ENSMUST00000132348.8	ENSMUSG00000026939.13	Tmem141	chr2	protein_coding	transmembrane protein 141
chr2	25511185;25511470	25511387;25511946	-	25511185;25511686	25511620;25511946	MXE	0.5	100	100	ENSMUST00000132348.8	ENSMUSG00000026939.13	Tmem141	chr2	protein_coding	transmembrane protein 141
chr2	25511185;25511540	25511373;25511620	-	25511185	25511620	cassetteExon	0.5	100	100	ENSMUST00000132348.8	ENSMUSG00000026939.13	Tmem141	chr2	protein_coding	transmembrane protein 141
chr2	25511185;25511540	25511387;25511620	-	25511185	25511620	cassetteExon	0.5	100	100	ENSMUST00000132348.8	ENSMUSG00000026939.13	Tmem141	chr2	protein_coding	transmembrane protein 141
chr2	25511185	25511620	-	25511540	25511620	3pMXE	0.33	50	50	ENSMUST00000155893.2	ENSMUSG00000026939.13	Tmem141	chr2	protein_coding	transmembrane protein 141
chr2	25515575	25516100	-	25515575	25516024	A5SS	0.5	50	50	ENSMUST00000028307.9	ENSMUSG00000026938.11	Fcna	chr2	protein_coding	ficolin A
chr2	25551008	25551897	+	25551008	25551424	3pMXE	0.33	50	50	ENSMUST00000100312.10	ENSMUSG00000026937.13	Lcn5	chr2	protein_coding	lipocalin 5
chr2	25551008	25551094	+	25551008	25551424	A3SS	0.33	50	50	ENSMUST00000100312.10	ENSMUSG00000026937.13	Lcn5	chr2	protein_coding	lipocalin 5
chr2	25551119	25551561	+	25551119	25551555	A3SS	0.5	50	50	ENSMUST00000028306.13	ENSMUSG00000026937.13	Lcn5	chr2	protein_coding	lipocalin 5
chr2	25551008	25551094	+	25551008	25551897	A3SS	0.33	50	50	ENSMUST00000100313.4	ENSMUSG00000026937.13	Lcn5	chr2	protein_coding	lipocalin 5
chr2	25570828	25570927	+	25570828	25570948	A3SS	0.5	50	50	ENSMUST00000114199.8	ENSMUSG00000045684.11	Lcn6	chr2	protein_coding	lipocalin 6
chr2	25571049	25571183	+	25571049	25571263	A3SS	0.5	50	50	ENSMUST00000114199.8	ENSMUSG00000045684.11	Lcn6	chr2	protein_coding	lipocalin 6
chr2	25597367	25598105	-	25597367	25599630	A5SS	0.5	50	50	ENSMUST00000137661.2	ENSMUSG00000087612.2	A230005M16Rik	chr2	lncRNA	RIKEN cDNA A230005M16 gene
chr2	25674697	25675585	+	25674333	25675585	A5SS	0.5	50	50	ENSMUST00000211245.2	ENSMUSG00000085484.3	Gm13539	chr2	protein_coding	predicted gene 13539
chr2	25685293;25685614	25685423;25701020	-	25685293	25701020	cassetteExon	0.5	100	100	ENSMUST00000038010.5	ENSMUSG00000036401.6	Glt6d1	chr2	protein_coding	glycosyltransferase 6 domain containing 1
chr2	25791370	25793371	+	25791370;25792002	25791764;25793371	ES	0.5	50	50	ENSMUST00000198204.5	ENSMUSG00000058740.15	Kcnt1	chr2	protein_coding	potassium channel, subfamily T, member 1
chr2	25754074;25772249	25772208;25778081	+	25754074	25778081	cassetteExon	0.5	100	100	ENSMUST00000198204.5	ENSMUSG00000058740.15	Kcnt1	chr2	protein_coding	potassium channel, subfamily T, member 1
chr2	25801368;25802729	25802667;25805791	+	25801368	25805791	cassetteExon	0.5	100	100	ENSMUST00000198204.5	ENSMUSG00000058740.15	Kcnt1	chr2	protein_coding	potassium channel, subfamily T, member 1
chr2	25792002	25793377	+	25792002	25793371	A3SS	0.5	50	50	ENSMUST00000198204.5	ENSMUSG00000058740.15	Kcnt1	chr2	protein_coding	potassium channel, subfamily T, member 1
chr2	25796847	25797269	+	25796847	25797287	A3SS	0.5	50	50	ENSMUST00000198204.5	ENSMUSG00000058740.15	Kcnt1	chr2	protein_coding	potassium channel, subfamily T, member 1
chr2	25800298	25801121	+	25800298	25801038	A3SS	0.5	50	50	ENSMUST00000198204.5	ENSMUSG00000058740.15	Kcnt1	chr2	protein_coding	potassium channel, subfamily T, member 1
chr2	25768047	25778081	+	25754074	25778081	A5SS	0.33	50	50	ENSMUST00000198204.5	ENSMUSG00000058740.15	Kcnt1	chr2	protein_coding	potassium channel, subfamily T, member 1
chr2	25791068	25791221	+	25791009	25791221	A5SS	0.5	50	50	ENSMUST00000198204.5	ENSMUSG00000058740.15	Kcnt1	chr2	protein_coding	potassium channel, subfamily T, member 1
chr2	25768047	25772208	+	25754074	25772208	A5SS	0.5	50	50	ENSMUST00000171268.8	ENSMUSG00000058740.15	Kcnt1	chr2	protein_coding	potassium channel, subfamily T, member 1
chr2	25768047	25778081	+	25772249	25778081	A5SS&ES	0.33	50	50	ENSMUST00000171268.8	ENSMUSG00000058740.15	Kcnt1	chr2	protein_coding	potassium channel, subfamily T, member 1
chr2	25791370	25793371	+	25791370	25791764	A3SS&ES	0.5	50	50	ENSMUST00000200434.5	ENSMUSG00000058740.15	Kcnt1	chr2	protein_coding	potassium channel, subfamily T, member 1
chr2	25768047;25772249	25772208;25778081	+	25768047	25778081	cassetteExon	0.5	100	100	ENSMUST00000114172.6	ENSMUSG00000058740.15	Kcnt1	chr2	protein_coding	potassium channel, subfamily T, member 1
chr2	25823721	25825474	-	25823721;25824347	25824232;25825474	ES	0.5	50	50	ENSMUST00000114167.9	ENSMUSG00000026933.18	Camsap1	chr2	protein_coding	calmodulin regulated spectrin-associated protein 1
chr2	25835285	25846259	-	25835285;25842831	25842690;25846259	ES	0.25	50	50	ENSMUST00000114167.9	ENSMUSG00000026933.18	Camsap1	chr2	protein_coding	calmodulin regulated spectrin-associated protein 1
chr2	25842831	25855675	-	25842831;25846339	25846259;25855675	ES	0.5	50	50	ENSMUST00000114167.9	ENSMUSG00000026933.18	Camsap1	chr2	protein_coding	calmodulin regulated spectrin-associated protein 1
chr2	25855836	25872794	-	25855836;25856960	25856698;25872794	ES	0.5	50	50	ENSMUST00000114167.9	ENSMUSG00000026933.18	Camsap1	chr2	protein_coding	calmodulin regulated spectrin-associated protein 1
chr2	25842831;25843986	25843915;25846259	-	25842831	25846259	cassetteExon	0.5	100	100	ENSMUST00000114167.9	ENSMUSG00000026933.18	Camsap1	chr2	protein_coding	calmodulin regulated spectrin-associated protein 1
chr2	25842831;25843986	25843927;25846259	-	25842831	25846259	cassetteExon	0.5	100	100	ENSMUST00000114167.9	ENSMUSG00000026933.18	Camsap1	chr2	protein_coding	calmodulin regulated spectrin-associated protein 1
chr2	25842831;25845304	25845272;25846259	-	25842831	25846259	cassetteExon	0.5	100	100	ENSMUST00000114167.9	ENSMUSG00000026933.18	Camsap1	chr2	protein_coding	calmodulin regulated spectrin-associated protein 1
chr2	25820037	25823603	-	25820040	25823603	A3SS	0.5	50	50	ENSMUST00000114167.9	ENSMUSG00000026933.18	Camsap1	chr2	protein_coding	calmodulin regulated spectrin-associated protein 1
chr2	25825576	25825862	-	25825573	25825862	A3SS	0.5	50	50	ENSMUST00000114167.9	ENSMUSG00000026933.18	Camsap1	chr2	protein_coding	calmodulin regulated spectrin-associated protein 1
chr2	25820040	25823606	-	25820040	25823603	A5SS	0.5	50	50	ENSMUST00000114167.9	ENSMUSG00000026933.18	Camsap1	chr2	protein_coding	calmodulin regulated spectrin-associated protein 1
chr2	25856960	25873035	-	25856960	25872794	A5SS	0.5	50	50	ENSMUST00000114167.9	ENSMUSG00000026933.18	Camsap1	chr2	protein_coding	calmodulin regulated spectrin-associated protein 1
chr2	25855836	25872794	-	25855836	25856698	5pMXE	0.5	50	50	ENSMUST00000143977.8	ENSMUSG00000026933.18	Camsap1	chr2	protein_coding	calmodulin regulated spectrin-associated protein 1
chr2	25835285;25842831	25842690;25855675	-	25835285;25846339	25846259;25855675	MXE	0.5	100	100	ENSMUST00000143977.8	ENSMUSG00000026933.18	Camsap1	chr2	protein_coding	calmodulin regulated spectrin-associated protein 1
chr2	25843986	25846259	-	25835285	25846259	A3SS	0.25	50	50	ENSMUST00000143977.8	ENSMUSG00000026933.18	Camsap1	chr2	protein_coding	calmodulin regulated spectrin-associated protein 1
chr2	25845304	25846259	-	25835285	25846259	A3SS	0.25	50	50	ENSMUST00000143977.8	ENSMUSG00000026933.18	Camsap1	chr2	protein_coding	calmodulin regulated spectrin-associated protein 1
chr2	25823721	25825474	-	25823721	25824232	5pMXE	0.5	50	50	ENSMUST00000148146.2	ENSMUSG00000026933.18	Camsap1	chr2	protein_coding	calmodulin regulated spectrin-associated protein 1
chr2	25842831;25845304	25845272;25846259	-	25842831;25843986	25843927;25846259	MXE	0.5	100	100	ENSMUST00000134882.8	ENSMUSG00000026933.18	Camsap1	chr2	protein_coding	calmodulin regulated spectrin-associated protein 1
chr2	25842831	25843915	-	25842831	25843927	A5SS	0.2	50	50	ENSMUST00000134882.8	ENSMUSG00000026933.18	Camsap1	chr2	protein_coding	calmodulin regulated spectrin-associated protein 1
chr2	25842831;25843986	25843915;25846259	-	25842831;25845304	25845272;25846259	MXE	0.5	100	100	ENSMUST00000134054.8	ENSMUSG00000026933.18	Camsap1	chr2	protein_coding	calmodulin regulated spectrin-associated protein 1
chr2	25842831	25843915	-	25842831	25855675	A5SS	0.2	50	50	ENSMUST00000142028.2	ENSMUSG00000026933.18	Camsap1	chr2	protein_coding	calmodulin regulated spectrin-associated protein 1
chr2	25842831	25843927	-	25842831	25855675	A5SS	0.2	50	50	ENSMUST00000142028.2	ENSMUSG00000026933.18	Camsap1	chr2	protein_coding	calmodulin regulated spectrin-associated protein 1
chr2	25842831	25845272	-	25842831	25855675	A5SS	0.2	50	50	ENSMUST00000142028.2	ENSMUSG00000026933.18	Camsap1	chr2	protein_coding	calmodulin regulated spectrin-associated protein 1
chr2	25842831	25855675	-	25846339	25855675	3pMXE	0.5	50	50	ENSMUST00000139937.2	ENSMUSG00000026933.18	Camsap1	chr2	protein_coding	calmodulin regulated spectrin-associated protein 1
chr2	25889079;25895476	25895338;25896539	-	25889079	25896539	cassetteExon	0.5	100	100	ENSMUST00000123275.8	ENSMUSG00000036352.17	Ubac1	chr2	protein_coding	ubiquitin associated domain containing 1
chr2	25897965	25899173	-	25897965;25898981	25898873;25899173	ES	0.33	50	50	ENSMUST00000036509.14	ENSMUSG00000036352.17	Ubac1	chr2	protein_coding	ubiquitin associated domain containing 1
chr2	25904977;25906047	25905967;25906308	-	25904977	25906308	cassetteExon	0.5	100	100	ENSMUST00000036509.14	ENSMUSG00000036352.17	Ubac1	chr2	protein_coding	ubiquitin associated domain containing 1
chr2	25897831	25899173	-	25898981	25899173	A3SS&ES	0.33	50	50	ENSMUST00000036509.14	ENSMUSG00000036352.17	Ubac1	chr2	protein_coding	ubiquitin associated domain containing 1
chr2	25906428	25907376	-	25906428	25911409	A5SS	0.5	50	50	ENSMUST00000036509.14	ENSMUSG00000036352.17	Ubac1	chr2	protein_coding	ubiquitin associated domain containing 1
chr2	25897831	25899173	-	25897965	25899173	A3SS	0.33	50	50	ENSMUST00000154336.2	ENSMUSG00000036352.17	Ubac1	chr2	protein_coding	ubiquitin associated domain containing 1
chr2	25889079	25896539	-	25895476	25896539	3pMXE	0.5	50	50	ENSMUST00000146363.8	ENSMUSG00000036352.17	Ubac1	chr2	protein_coding	ubiquitin associated domain containing 1
chr2	25906428	25911409	-	25900641	25911409	A3SS	0.5	50	50	ENSMUST00000136750.3	ENSMUSG00000036352.17	Ubac1	chr2	protein_coding	ubiquitin associated domain containing 1
chr2	25900641	25904904	-	25900641	25911409	A5SS	0.5	50	50	ENSMUST00000136750.3	ENSMUSG00000036352.17	Ubac1	chr2	protein_coding	ubiquitin associated domain containing 1
chr2	25897965	25899173	-	25898981	25899173	3pMXE	0.33	50	50	ENSMUST00000148725.2	ENSMUSG00000036352.17	Ubac1	chr2	protein_coding	ubiquitin associated domain containing 1
chr2	25980494	26009891	-	25980494	25981763	5pMXE	0.33	50	50	ENSMUST00000114159.9	ENSMUSG00000026932.15	Nacc2	chr2	protein_coding	nucleus accumbens associated 2, BEN and BTB (POZ) domain containing
chr2	25980494	26012701	-	25980494	25981763	5pMXE	0.33	50	50	ENSMUST00000114159.9	ENSMUSG00000026932.15	Nacc2	chr2	protein_coding	nucleus accumbens associated 2, BEN and BTB (POZ) domain containing
chr2	25980494;26009986	26009891;26012701	-	25980494	26012701	cassetteExon	0.5	100	100	ENSMUST00000028300.6	ENSMUSG00000026932.15	Nacc2	chr2	protein_coding	nucleus accumbens associated 2, BEN and BTB (POZ) domain containing
chr2	25980172	25980254	-	25980172	26013105	A5SS	0.5	50	50	ENSMUST00000133212.2	ENSMUSG00000026932.15	Nacc2	chr2	protein_coding	nucleus accumbens associated 2, BEN and BTB (POZ) domain containing
chr2	26094133	26096357	-	26094133	26098114	A5SS	0.5	50	50	ENSMUST00000054099.16	ENSMUSG00000026934.16	Lhx3	chr2	protein_coding	LIM homeobox protein 3
chr2	26171635;26172239	26172123;26177947	-	26171635	26177947	cassetteExon	0.5	100	100	ENSMUST00000217256.2	ENSMUSG00000048038.9	Ccdc187	chr2	protein_coding	coiled-coil domain containing 187
chr2	26214925	26216226	+	26214925;26215504	26215349;26216226	ES	0.5	50	50	ENSMUST00000066936.9	ENSMUSG00000026930.16	Gpsm1	chr2	protein_coding	G-protein signalling modulator 1 (AGS3-like, C. elegans)
chr2	26229718	26234614	+	26229718;26230596	26230417;26234614	ES	0.33	50	50	ENSMUST00000066936.9	ENSMUSG00000026930.16	Gpsm1	chr2	protein_coding	G-protein signalling modulator 1 (AGS3-like, C. elegans)
chr2	26210038	26212426	+	26205732	26212426	A5SS	0.5	50	50	ENSMUST00000066936.9	ENSMUSG00000026930.16	Gpsm1	chr2	protein_coding	G-protein signalling modulator 1 (AGS3-like, C. elegans)
chr2	26220577	26229648	+	26217427	26229648	A5SS	0.5	50	50	ENSMUST00000066936.9	ENSMUSG00000026930.16	Gpsm1	chr2	protein_coding	G-protein signalling modulator 1 (AGS3-like, C. elegans)
chr2	26232442	26234614	+	26230596	26234614	A5SS	0.33	50	50	ENSMUST00000066936.9	ENSMUSG00000026930.16	Gpsm1	chr2	protein_coding	G-protein signalling modulator 1 (AGS3-like, C. elegans)
chr2	26232442	26234614	+	26229718	26234614	A5SS	0.33	50	50	ENSMUST00000078616.12	ENSMUSG00000026930.16	Gpsm1	chr2	protein_coding	G-protein signalling modulator 1 (AGS3-like, C. elegans)
chr2	26214925	26216226	+	26215504	26216226	5pMXE	0.5	50	50	ENSMUST00000132638.2	ENSMUSG00000026930.16	Gpsm1	chr2	protein_coding	G-protein signalling modulator 1 (AGS3-like, C. elegans)
chr2	26229718	26234614	+	26229718	26230417	3pMXE	0.5	50	50	ENSMUST00000152895.8	ENSMUSG00000026930.16	Gpsm1	chr2	protein_coding	G-protein signalling modulator 1 (AGS3-like, C. elegans)
chr2	26240570;26241486	26241347;26241785	-	26240570	26241785	cassetteExon	0.5	100	100	ENSMUST00000125848.2	ENSMUSG00000075467.5	Dnlz	chr2	protein_coding	DNL-type zinc finger
chr2	26258300	26259613	+	26242743	26259613	A5SS	0.5	50	50	ENSMUST00000125198.2	ENSMUSG00000086779.2	Gm13562	chr2	lncRNA	predicted gene 13562
chr2	26268079;26268291	26268173;26268506	-	26268079	26268506	cassetteExon	0.5	100	100	ENSMUST00000114115.9	ENSMUSG00000036281.14	Snapc4	chr2	protein_coding	small nuclear RNA activating complex, polypeptide 4
chr2	26253804	26254632	-	26253780	26254632	A3SS	0.5	50	50	ENSMUST00000114115.9	ENSMUSG00000036281.14	Snapc4	chr2	protein_coding	small nuclear RNA activating complex, polypeptide 4
chr2	26263124	26263331	-	26263092	26263331	A3SS	0.5	50	50	ENSMUST00000114115.9	ENSMUSG00000036281.14	Snapc4	chr2	protein_coding	small nuclear RNA activating complex, polypeptide 4
chr2	26264572	26264655	-	26264576	26264655	A3SS	0.5	50	50	ENSMUST00000114115.9	ENSMUSG00000036281.14	Snapc4	chr2	protein_coding	small nuclear RNA activating complex, polypeptide 4
chr2	26260892	26262771	-	26260892	26262743	A5SS	0.5	50	50	ENSMUST00000114115.9	ENSMUSG00000036281.14	Snapc4	chr2	protein_coding	small nuclear RNA activating complex, polypeptide 4
chr2	26268079	26268462	-	26268079	26268506	A5SS	0.33	50	50	ENSMUST00000114115.9	ENSMUSG00000036281.14	Snapc4	chr2	protein_coding	small nuclear RNA activating complex, polypeptide 4
chr2	26268079	26268462	-	26268079	26268173	A5SS&ES	0.33	50	50	ENSMUST00000149850.8	ENSMUSG00000036281.14	Snapc4	chr2	protein_coding	small nuclear RNA activating complex, polypeptide 4
chr2	26277101	26277610	+	26277101	26277210	3pMXE	0.5	50	50	ENSMUST00000125518.2	ENSMUSG00000085767.2	Gm13563	chr2	lncRNA	predicted gene 13563
chr2	26275642	26276765	+	26275642	26276937	A3SS	0.5	50	50	ENSMUST00000125518.2	ENSMUSG00000085767.2	Gm13563	chr2	lncRNA	predicted gene 13563
chr2	26277101;26277518	26277210;26277610	+	26277101	26277610	cassetteExon	0.5	100	100	ENSMUST00000152375.2	ENSMUSG00000085767.2	Gm13563	chr2	lncRNA	predicted gene 13563
chr2	26277101	26277610	+	26277518	26277610	5pMXE	0.5	50	50	ENSMUST00000150375.2	ENSMUSG00000085767.2	Gm13563	chr2	lncRNA	predicted gene 13563
chr2	26277683	26279161	-	26277683;26279077	26278928;26279161	ES	0.33	50	50	ENSMUST00000114100.10	ENSMUSG00000026927.18	Entr1	chr2	protein_coding	endosome associated trafficking regulator 1
chr2	26277683;26278572	26278504;26278928	-	26277683	26278928	cassetteExon	0.5	100	100	ENSMUST00000114100.10	ENSMUSG00000026927.18	Entr1	chr2	protein_coding	endosome associated trafficking regulator 1
chr2	26277683;26278572	26278504;26279161	-	26277683;26279077	26278928;26279161	MXE	0.5	100	100	ENSMUST00000114100.10	ENSMUSG00000026927.18	Entr1	chr2	protein_coding	endosome associated trafficking regulator 1
chr2	26275157	26275553	-	26275157	26275510	A5SS	0.5	50	50	ENSMUST00000114100.10	ENSMUSG00000026927.18	Entr1	chr2	protein_coding	endosome associated trafficking regulator 1
chr2	26277683	26278598	-	26277683	26278928	A5SS	0.25	50	50	ENSMUST00000114100.10	ENSMUSG00000026927.18	Entr1	chr2	protein_coding	endosome associated trafficking regulator 1
chr2	26277683;26278572	26278504;26279161	-	26277683	26279161	cassetteExon	0.5	100	100	ENSMUST00000077983.13	ENSMUSG00000026927.18	Entr1	chr2	protein_coding	endosome associated trafficking regulator 1
chr2	26277683;26279077	26278598;26279161	-	26277683	26279161	cassetteExon	0.5	100	100	ENSMUST00000077983.13	ENSMUSG00000026927.18	Entr1	chr2	protein_coding	endosome associated trafficking regulator 1
chr2	26277683;26279077	26278598;26279161	-	26277683;26278572	26278504;26279161	MXE	0.5	100	100	ENSMUST00000028293.12	ENSMUSG00000026927.18	Entr1	chr2	protein_coding	endosome associated trafficking regulator 1
chr2	26278572;26279077	26278928;26279161	-	26278572	26279161	cassetteExon	0.5	100	100	ENSMUST00000028293.12	ENSMUSG00000026927.18	Entr1	chr2	protein_coding	endosome associated trafficking regulator 1
chr2	26277683	26278598	-	26277683	26278504	A5SS&ES	0.25	50	50	ENSMUST00000114102.10	ENSMUSG00000026927.18	Entr1	chr2	protein_coding	endosome associated trafficking regulator 1
chr2	26277683	26279161	-	26277683	26278598	5pMXE	0.25	50	50	ENSMUST00000139738.2	ENSMUSG00000026927.18	Entr1	chr2	protein_coding	endosome associated trafficking regulator 1
chr2	26277683	26279161	-	26277683	26278504	A5SS&ES	0.25	50	50	ENSMUST00000137814.8	ENSMUSG00000026927.18	Entr1	chr2	protein_coding	endosome associated trafficking regulator 1
chr2	26278572	26279161	-	26278572	26278928	A5SS	0.5	50	50	ENSMUST00000137814.8	ENSMUSG00000026927.18	Entr1	chr2	protein_coding	endosome associated trafficking regulator 1
chr2	26277683	26279161	-	26277683	26278928	A5SS	0.25	50	50	ENSMUST00000140074.2	ENSMUSG00000026927.18	Entr1	chr2	protein_coding	endosome associated trafficking regulator 1
chr2	26280589	26281878	+	26280589;26281190	26281096;26281878	ES	0.5	50	50	ENSMUST00000076431.13	ENSMUSG00000026926.15	Pmpca	chr2	protein_coding	peptidase (mitochondrial processing) alpha
chr2	26279444	26279843	+	26279444	26279948	A3SS	0.5	50	50	ENSMUST00000076431.13	ENSMUSG00000026926.15	Pmpca	chr2	protein_coding	peptidase (mitochondrial processing) alpha
chr2	26280589	26281878	+	26281190	26281878	5pMXE	0.5	50	50	ENSMUST00000139535.2	ENSMUSG00000026926.15	Pmpca	chr2	protein_coding	peptidase (mitochondrial processing) alpha
chr2	26290155	26290898	-	26290155;26290504	26290385;26290898	ES	0.5	50	50	ENSMUST00000145701.8	ENSMUSG00000026925.17	Inpp5e	chr2	protein_coding	inositol polyphosphate-5-phosphatase E
chr2	26286909	26288568	-	26287983	26288568	A3SS	0.33	50	50	ENSMUST00000145701.8	ENSMUSG00000026925.17	Inpp5e	chr2	protein_coding	inositol polyphosphate-5-phosphatase E
chr2	26287936	26288568	-	26287983	26288568	A3SS	0.33	50	50	ENSMUST00000145701.8	ENSMUSG00000026925.17	Inpp5e	chr2	protein_coding	inositol polyphosphate-5-phosphatase E
chr2	26290920	26291613	-	26291022	26291613	A3SS	0.5	50	50	ENSMUST00000145701.8	ENSMUSG00000026925.17	Inpp5e	chr2	protein_coding	inositol polyphosphate-5-phosphatase E
chr2	26291797	26292112	-	26291710	26292112	A3SS	0.5	50	50	ENSMUST00000145701.8	ENSMUSG00000026925.17	Inpp5e	chr2	protein_coding	inositol polyphosphate-5-phosphatase E
chr2	26287936	26288568	-	26286909	26288568	A3SS	0.33	50	50	ENSMUST00000131109.8	ENSMUSG00000026925.17	Inpp5e	chr2	protein_coding	inositol polyphosphate-5-phosphatase E
chr2	26290155	26290898	-	26290155	26290385	5pMXE	0.5	50	50	ENSMUST00000150907.2	ENSMUSG00000026925.17	Inpp5e	chr2	protein_coding	inositol polyphosphate-5-phosphatase E
chr2	26302925;26303750	26303691;26304383	-	26302925	26304383	cassetteExon	0.5	100	100	ENSMUST00000156442.8	ENSMUSG00000026924.18	Sec16a	chr2	protein_coding	SEC16 homolog A, endoplasmic reticulum export factor
chr2	26306269	26306383	-	26306240	26306383	A3SS	0.5	50	50	ENSMUST00000156442.8	ENSMUSG00000026924.18	Sec16a	chr2	protein_coding	SEC16 homolog A, endoplasmic reticulum export factor
chr2	26304457	26305294	-	26304457	26305319	A5SS	0.5	50	50	ENSMUST00000156442.8	ENSMUSG00000026924.18	Sec16a	chr2	protein_coding	SEC16 homolog A, endoplasmic reticulum export factor
chr2	26332082	26334890	-	26332082	26335087	A5SS	0.5	50	50	ENSMUST00000114082.9	ENSMUSG00000026924.18	Sec16a	chr2	protein_coding	SEC16 homolog A, endoplasmic reticulum export factor
chr2	26355578	26356088	-	26355578	26356479	A5SS	0.33	50	50	ENSMUST00000028288.5	ENSMUSG00000026923.16	Notch1	chr2	protein_coding	notch 1
chr2	26355578	26356319	-	26355578	26356479	A5SS	0.33	50	50	ENSMUST00000028288.5	ENSMUSG00000026923.16	Notch1	chr2	protein_coding	notch 1
chr2	26356627	26356720	-	26356627	26357641	A5SS	0.33	50	50	ENSMUST00000028288.5	ENSMUSG00000026923.16	Notch1	chr2	protein_coding	notch 1
chr2	26356627	26357547	-	26356627	26357641	A5SS	0.33	50	50	ENSMUST00000028288.5	ENSMUSG00000026923.16	Notch1	chr2	protein_coding	notch 1
chr2	26355578	26356319	-	26355578	26356088	5pMXE	0.33	50	50	ENSMUST00000148948.8	ENSMUSG00000026923.16	Notch1	chr2	protein_coding	notch 1
chr2	26356627	26357547	-	26356627	26356720	5pMXE	0.33	50	50	ENSMUST00000140082.8	ENSMUSG00000026923.16	Notch1	chr2	protein_coding	notch 1
chr2	26362284	26362796	-	26362284	26399624	A5SS	0.5	50	50	ENSMUST00000132820.2	ENSMUSG00000026923.16	Notch1	chr2	protein_coding	notch 1
chr2	26479181	26480669	+	26479181	26479342	3pMXE	0.5	50	50	ENSMUST00000152713.9	ENSMUSG00000026921.21	Egfl7	chr2	protein_coding	EGF-like domain 7
chr2	26471253	26475597	+	26470121	26475597	A5SS	0.33	50	50	ENSMUST00000152713.9	ENSMUSG00000026921.21	Egfl7	chr2	protein_coding	EGF-like domain 7
chr2	26474060	26475597	+	26470121	26475597	A5SS	0.33	50	50	ENSMUST00000152713.9	ENSMUSG00000026921.21	Egfl7	chr2	protein_coding	EGF-like domain 7
chr2	26476693	26479057	+	26475687	26479057	A5SS	0.2	50	50	ENSMUST00000152713.9	ENSMUSG00000026921.21	Egfl7	chr2	protein_coding	EGF-like domain 7
chr2	26476729	26479057	+	26475687	26479057	A5SS	0.2	50	50	ENSMUST00000152713.9	ENSMUSG00000026921.21	Egfl7	chr2	protein_coding	EGF-like domain 7
chr2	26476832	26479057	+	26475687	26479057	A5SS	0.2	50	50	ENSMUST00000152713.9	ENSMUSG00000026921.21	Egfl7	chr2	protein_coding	EGF-like domain 7
chr2	26478573	26479057	+	26475687	26479057	A5SS	0.2	50	50	ENSMUST00000152713.9	ENSMUSG00000026921.21	Egfl7	chr2	protein_coding	EGF-like domain 7
chr2	26479458	26480669	+	26479458;26480507	26480392;26480669	ES	0.33	50	50	ENSMUST00000238951.2	ENSMUSG00000026921.21	Egfl7	chr2	protein_coding	EGF-like domain 7
chr2	26481075	26482130	+	26481075;26481740	26481676;26482130	ES	0.5	50	50	ENSMUST00000238951.2	ENSMUSG00000026921.21	Egfl7	chr2	protein_coding	EGF-like domain 7
chr2	26480507	26480589	+	26480507	26480669	A3SS	0.5	50	50	ENSMUST00000238951.2	ENSMUSG00000026921.21	Egfl7	chr2	protein_coding	EGF-like domain 7
chr2	26474060	26475597	+	26471253	26475597	A5SS	0.33	50	50	ENSMUST00000238951.2	ENSMUSG00000026921.21	Egfl7	chr2	protein_coding	EGF-like domain 7
chr2	26482253	26482430	+	26482292	26482430	A5SS	0.33	50	50	ENSMUST00000238951.2	ENSMUSG00000026921.21	Egfl7	chr2	protein_coding	EGF-like domain 7
chr2	26482261	26482430	+	26482292	26482430	A5SS	0.33	50	50	ENSMUST00000238951.2	ENSMUSG00000026921.21	Egfl7	chr2	protein_coding	EGF-like domain 7
chr2	26482261	26482430	+	26482253	26482430	A5SS	0.33	50	50	ENSMUST00000100290.13	ENSMUSG00000026921.21	Egfl7	chr2	protein_coding	EGF-like domain 7
chr2	26479458	26480669	+	26479458	26480392	A3SS&ES	0.5	50	50	ENSMUST00000139801.9	ENSMUSG00000026921.21	Egfl7	chr2	protein_coding	EGF-like domain 7
chr2	26476729	26479057	+	26476693	26479057	A5SS	0.2	50	50	ENSMUST00000239075.2	ENSMUSG00000026921.21	Egfl7	chr2	protein_coding	EGF-like domain 7
chr2	26476832	26479057	+	26476693	26479057	A5SS	0.2	50	50	ENSMUST00000239075.2	ENSMUSG00000026921.21	Egfl7	chr2	protein_coding	EGF-like domain 7
chr2	26478573	26479057	+	26476693	26479057	A5SS	0.2	50	50	ENSMUST00000239075.2	ENSMUSG00000026921.21	Egfl7	chr2	protein_coding	EGF-like domain 7
chr2	26479181	26480669	+	26479181;26479458	26479342;26480669	ES	0.33	50	50	ENSMUST00000149460.8	ENSMUSG00000026921.21	Egfl7	chr2	protein_coding	EGF-like domain 7
chr2	26480764	26522616	+	26480764	26480911	3pMXE	0.5	50	50	ENSMUST00000149460.8	ENSMUSG00000026921.21	Egfl7	chr2	protein_coding	EGF-like domain 7
chr2	26476832	26479057	+	26476729	26479057	A5SS	0.2	50	50	ENSMUST00000145575.10	ENSMUSG00000026921.21	Egfl7	chr2	protein_coding	EGF-like domain 7
chr2	26478573	26479057	+	26476729	26479057	A5SS	0.2	50	50	ENSMUST00000145575.10	ENSMUSG00000026921.21	Egfl7	chr2	protein_coding	EGF-like domain 7
chr2	26478573	26479057	+	26476832	26479057	A5SS	0.2	50	50	ENSMUST00000173920.9	ENSMUSG00000026921.21	Egfl7	chr2	protein_coding	EGF-like domain 7
chr2	26481075	26482130	+	26481740	26482130	5pMXE	0.5	50	50	ENSMUST00000152988.9	ENSMUSG00000026921.21	Egfl7	chr2	protein_coding	EGF-like domain 7
chr2	26480507	26480669	+	26479181	26480669	A5SS	0.33	50	50	ENSMUST00000174066.3	ENSMUSG00000092356.3	Gm20532	chr2	protein_coding	predicted gene 20532
chr2	26518711	26522616	+	26480764	26522616	A5SS	0.5	50	50	ENSMUST00000174066.3	ENSMUSG00000092356.3	Gm20532	chr2	protein_coding	predicted gene 20532
chr2	26487349	26493661	-	26487349	26494136	A5SS	0.25	50	50	ENSMUST00000131940.8	ENSMUSG00000026922.14	Agpat2	chr2	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)
chr2	26487349	26493674	-	26487349	26494136	A5SS	0.25	50	50	ENSMUST00000131940.8	ENSMUSG00000026922.14	Agpat2	chr2	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)
chr2	26487349	26494041	-	26487349	26494136	A5SS	0.25	50	50	ENSMUST00000131940.8	ENSMUSG00000026922.14	Agpat2	chr2	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)
chr2	26487349	26493661	-	26487349	26494041	A5SS	0.25	50	50	ENSMUST00000028286.12	ENSMUSG00000026922.14	Agpat2	chr2	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)
chr2	26487349	26493674	-	26487349	26494041	A5SS	0.25	50	50	ENSMUST00000028286.12	ENSMUSG00000026922.14	Agpat2	chr2	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)
chr2	26486187	26486303	-	26486188	26486303	A3SS	0.5	50	50	ENSMUST00000140508.2	ENSMUSG00000026922.14	Agpat2	chr2	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)
chr2	26487349	26493661	-	26487349	26493674	A5SS	0.25	50	50	ENSMUST00000140508.2	ENSMUSG00000026922.14	Agpat2	chr2	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)
chr2	26535615	26535735	+	26535615	26535760	A3SS	0.5	50	50	ENSMUST00000126798.8	ENSMUSG00000086775.8	Snhg7os	chr2	lncRNA	small nucleolar RNA host gene 7, opposite strand
chr2	26739002	26754883	-	26739002	26746670	5pMXE	0.5	50	50	ENSMUST00000114045.9	ENSMUSG00000015787.16	Abo	chr2	protein_coding	ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase, transferase B, alpha 1-3-galactosyltransferase)
chr2	26779390	26782879	-	26779390	26782003	5pMXE	0.33	50	50	ENSMUST00000140392.2	ENSMUSG00000036160.14	Surf6	chr2	protein_coding	surfeit gene 6
chr2	26779390	26781987	-	26779390	26782003	A5SS	0.33	50	50	ENSMUST00000140392.2	ENSMUSG00000036160.14	Surf6	chr2	protein_coding	surfeit gene 6
chr2	26779390	26782879	-	26779390	26781987	5pMXE	0.33	50	50	ENSMUST00000129554.2	ENSMUSG00000036160.14	Surf6	chr2	protein_coding	surfeit gene 6
chr2	26781026	26782879	-	26779390	26782879	A3SS	0.33	50	50	ENSMUST00000137904.8	ENSMUSG00000036160.14	Surf6	chr2	protein_coding	surfeit gene 6
chr2	26782737	26782879	-	26779390	26782879	A3SS	0.33	50	50	ENSMUST00000137904.8	ENSMUSG00000036160.14	Surf6	chr2	protein_coding	surfeit gene 6
chr2	26781026	26782879	-	26782737	26782879	A3SS	0.33	50	50	ENSMUST00000047632.14	ENSMUSG00000036160.14	Surf6	chr2	protein_coding	surfeit gene 6
chr2	26789944	26792600	-	26789944	26792706	A5SS	0.5	50	50	ENSMUST00000047632.14	ENSMUSG00000036160.14	Surf6	chr2	protein_coding	surfeit gene 6
chr2	26798421	26799005	-	26798313	26799005	A3SS	0.5	50	50	ENSMUST00000102899.10	ENSMUSG00000015776.13	Med22	chr2	protein_coding	mediator complex subunit 22
chr2	26802171	26802305	+	26802171	26802378	A3SS	0.5	50	50	ENSMUST00000102898.5	ENSMUSG00000062647.17	Rpl7a	chr2	protein_coding	ribosomal protein L7A
chr2	26802167	26802378	+	26802171	26802378	A5SS	0.5	50	50	ENSMUST00000102898.5	ENSMUSG00000062647.17	Rpl7a	chr2	protein_coding	ribosomal protein L7A
chr2	26803702	26803925	-	26803670	26803925	A3SS	0.5	50	50	ENSMUST00000142967.7	ENSMUSG00000015790.17	Surf1	chr2	protein_coding	surfeit gene 1
chr2	26805544	26805608	-	26805526	26805608	A3SS	0.5	50	50	ENSMUST00000183520.8	ENSMUSG00000015790.17	Surf1	chr2	protein_coding	surfeit gene 1
chr2	26805761	26805967	-	26805741	26805967	A3SS	0.33	50	50	ENSMUST00000183520.8	ENSMUSG00000015790.17	Surf1	chr2	protein_coding	surfeit gene 1
chr2	26805781	26805967	-	26805741	26805967	A3SS	0.33	50	50	ENSMUST00000183520.8	ENSMUSG00000015790.17	Surf1	chr2	protein_coding	surfeit gene 1
chr2	26805781	26806269	-	26806018	26806269	A3SS&ES	0.33	50	50	ENSMUST00000183520.8	ENSMUSG00000015790.17	Surf1	chr2	protein_coding	surfeit gene 1
chr2	26805796	26806269	-	26806018	26806269	A3SS&ES	0.33	50	50	ENSMUST00000183520.8	ENSMUSG00000015790.17	Surf1	chr2	protein_coding	surfeit gene 1
chr2	26805781	26806269	-	26805781;26806018	26805967;26806269	ES	0.33	50	50	ENSMUST00000167661.7	ENSMUSG00000015790.17	Surf1	chr2	protein_coding	surfeit gene 1
chr2	26805761	26805967	-	26805781	26805967	A3SS	0.33	50	50	ENSMUST00000167661.7	ENSMUSG00000015790.17	Surf1	chr2	protein_coding	surfeit gene 1
chr2	26805796	26806269	-	26805781	26806269	A3SS	0.33	50	50	ENSMUST00000147110.8	ENSMUSG00000015790.17	Surf1	chr2	protein_coding	surfeit gene 1
chr2	26807543	26808877	+	26807543	26808885	A3SS	0.33	50	50	ENSMUST00000015017.8	ENSMUSG00000014873.16	Surf2	chr2	protein_coding	surfeit gene 2
chr2	26807543	26808941	+	26807543	26808885	A3SS	0.33	50	50	ENSMUST00000015017.8	ENSMUSG00000014873.16	Surf2	chr2	protein_coding	surfeit gene 2
chr2	26809370	26809615	+	26809370	26809739	A3SS	0.33	50	50	ENSMUST00000015017.8	ENSMUSG00000014873.16	Surf2	chr2	protein_coding	surfeit gene 2
chr2	26809370	26809745	+	26809370	26809739	A3SS	0.33	50	50	ENSMUST00000015017.8	ENSMUSG00000014873.16	Surf2	chr2	protein_coding	surfeit gene 2
chr2	26809370	26809745	+	26809370	26809615	A3SS	0.33	50	50	ENSMUST00000135506.2	ENSMUSG00000014873.16	Surf2	chr2	protein_coding	surfeit gene 2
chr2	26807543	26808941	+	26807543	26808877	A3SS	0.33	50	50	ENSMUST00000157066.8	ENSMUSG00000014873.16	Surf2	chr2	protein_coding	surfeit gene 2
chr2	26815008	26816781	-	26815008;26815696	26815620;26816781	ES	0.5	50	50	ENSMUST00000015011.10	ENSMUSG00000014867.10	Surf4	chr2	protein_coding	surfeit gene 4
chr2	26816967	26823714	-	26816967	26823287	A5SS	0.5	50	50	ENSMUST00000015011.10	ENSMUSG00000014867.10	Surf4	chr2	protein_coding	surfeit gene 4
chr2	26824124	26825304	+	26824124	26825326	A3SS	0.5	50	50	ENSMUST00000153771.8	ENSMUSG00000049897.15	Stkld1	chr2	protein_coding	serine/threonine kinase-like domain containing 1
chr2	26845581	26848491	-	26845581;26846375	26846301;26848491	ES	0.5	50	50	ENSMUST00000064244.11	ENSMUSG00000052406.15	Rexo4	chr2	protein_coding	REX4, 3'-5' exonuclease
chr2	26852996	26854064	-	26852735	26854064	A3SS	0.5	50	50	ENSMUST00000064244.11	ENSMUSG00000052406.15	Rexo4	chr2	protein_coding	REX4, 3'-5' exonuclease
chr2	26845581	26848491	-	26845581	26846301	5pMXE	0.5	50	50	ENSMUST00000123126.2	ENSMUSG00000052406.15	Rexo4	chr2	protein_coding	REX4, 3'-5' exonuclease
chr2	26845581;26846375	26846301;26850615	-	26845581;26850429	26848491;26850615	MXE	0.5	100	100	ENSMUST00000136710.2	ENSMUSG00000052406.15	Rexo4	chr2	protein_coding	REX4, 3'-5' exonuclease
chr2	26850429	26850615	-	26846375	26850615	A3SS	0.5	50	50	ENSMUST00000135752.2	ENSMUSG00000052406.15	Rexo4	chr2	protein_coding	REX4, 3'-5' exonuclease
chr2	26846375	26848491	-	26846375	26850615	A5SS	0.5	50	50	ENSMUST00000135752.2	ENSMUSG00000052406.15	Rexo4	chr2	protein_coding	REX4, 3'-5' exonuclease
chr2	26886926	26894756	+	26886926	26888302	3pMXE	0.5	50	50	ENSMUST00000014996.14	ENSMUSG00000014852.17	Adamts13	chr2	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13
chr2	26905621	26907091	+	26905621	26905955	3pMXE	0.33	50	50	ENSMUST00000114005.9	ENSMUSG00000015488.15	Cacfd1	chr2	protein_coding	calcium channel flower domain containing 1
chr2	26905621	26908385	+	26905621	26905955	3pMXE	0.33	50	50	ENSMUST00000114005.9	ENSMUSG00000015488.15	Cacfd1	chr2	protein_coding	calcium channel flower domain containing 1
chr2	26900117;26903566	26903439;26904105	+	26900117	26904105	cassetteExon	0.5	100	100	ENSMUST00000114005.9	ENSMUSG00000015488.15	Cacfd1	chr2	protein_coding	calcium channel flower domain containing 1
chr2	26900654	26904105	+	26900117	26904105	A5SS	0.33	50	50	ENSMUST00000114005.9	ENSMUSG00000015488.15	Cacfd1	chr2	protein_coding	calcium channel flower domain containing 1
chr2	26905621;26907164	26907091;26908385	+	26905621	26908385	cassetteExon	0.5	100	100	ENSMUST00000114006.8	ENSMUSG00000015488.15	Cacfd1	chr2	protein_coding	calcium channel flower domain containing 1
chr2	26900654	26904105	+	26903566	26904105	A5SS&ES	0.33	50	50	ENSMUST00000133807.2	ENSMUSG00000015488.15	Cacfd1	chr2	protein_coding	calcium channel flower domain containing 1
chr2	26905621	26908385	+	26905621	26907091	3pMXE	0.33	50	50	ENSMUST00000145290.2	ENSMUSG00000015488.15	Cacfd1	chr2	protein_coding	calcium channel flower domain containing 1
chr2	26916119	26917829	-	26916119;26917315	26917153;26917829	ES	0.33	50	50	ENSMUST00000102890.11	ENSMUSG00000036067.13	Slc2a6	chr2	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 6
chr2	26912876;26913261	26913100;26913547	-	26912876	26913547	cassetteExon	0.5	100	100	ENSMUST00000102890.11	ENSMUSG00000036067.13	Slc2a6	chr2	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 6
chr2	26917300	26917829	-	26917315	26917829	A3SS	0.33	50	50	ENSMUST00000102890.11	ENSMUSG00000036067.13	Slc2a6	chr2	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 6
chr2	26912876	26913547	-	26912876	26913100	A5SS	0.5	50	50	ENSMUST00000145742.8	ENSMUSG00000036067.13	Slc2a6	chr2	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 6
chr2	26916119;26917300	26917153;26917829	-	26916119	26917829	cassetteExon	0.5	100	100	ENSMUST00000129835.8	ENSMUSG00000036067.13	Slc2a6	chr2	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 6
chr2	26957479	26957752	-	26957479	26961893	A5SS	0.5	50	50	ENSMUST00000009358.9	ENSMUSG00000009214.10	Mymk	chr2	protein_coding	myomaker, myoblast fusion factor
chr2	26988351	26988618	+	26985784	26988618	A5SS	0.5	50	50	ENSMUST00000091233.7	ENSMUSG00000036040.15	Adamtsl2	chr2	protein_coding	ADAMTS-like 2
chr2	27067244	27067320	+	27064993	27067320	A5SS	0.5	50	50	ENSMUST00000000910.7	ENSMUSG00000000889.9	Dbh	chr2	protein_coding	dopamine beta hydroxylase
chr2	27120869	27124303	-	27120869	27122585	5pMXE	0.5	50	50	ENSMUST00000091224.11	ENSMUSG00000009614.17	Sardh	chr2	protein_coding	sarcosine dehydrogenase
chr2	27105197;27108923	27108810;27110655	-	27105197	27110655	cassetteExon	0.5	100	100	ENSMUST00000091224.11	ENSMUSG00000009614.17	Sardh	chr2	protein_coding	sarcosine dehydrogenase
chr2	27087703	27099911	-	27087703	27101023	A5SS	0.5	50	50	ENSMUST00000091224.11	ENSMUSG00000009614.17	Sardh	chr2	protein_coding	sarcosine dehydrogenase
chr2	27105197	27105490	-	27105197	27110655	A5SS	0.33	50	50	ENSMUST00000091224.11	ENSMUSG00000009614.17	Sardh	chr2	protein_coding	sarcosine dehydrogenase
chr2	27105197	27105490	-	27105197	27108810	A5SS	0.33	50	50	ENSMUST00000102886.10	ENSMUSG00000009614.17	Sardh	chr2	protein_coding	sarcosine dehydrogenase
chr2	27105197	27110655	-	27105197	27108810	5pMXE	0.33	50	50	ENSMUST00000127805.8	ENSMUSG00000009614.17	Sardh	chr2	protein_coding	sarcosine dehydrogenase
chr2	27136714	27137360	-	27136714	27136811	5pMXE	0.33	50	50	ENSMUST00000149733.8	ENSMUSG00000009614.17	Sardh	chr2	protein_coding	sarcosine dehydrogenase
chr2	27136714	27138254	-	27136714	27136811	5pMXE	0.33	50	50	ENSMUST00000149733.8	ENSMUSG00000009614.17	Sardh	chr2	protein_coding	sarcosine dehydrogenase
chr2	27136714	27137360	-	27136714	27138254	A5SS	0.33	50	50	ENSMUST00000139312.8	ENSMUSG00000009614.17	Sardh	chr2	protein_coding	sarcosine dehydrogenase
chr2	27159034	27160140	-	27159034;27159217	27159133;27160140	ES	0.33	50	50	ENSMUST00000185188.8	ENSMUSG00000009621.19	Vav2	chr2	protein_coding	vav 2 oncogene
chr2	27173430	27175645	-	27173430;27174865	27174851;27175645	ES	0.5	50	50	ENSMUST00000185188.8	ENSMUSG00000009621.19	Vav2	chr2	protein_coding	vav 2 oncogene
chr2	27189484	27192020	-	27189484;27190456	27190442;27192020	ES	0.5	50	50	ENSMUST00000185188.8	ENSMUSG00000009621.19	Vav2	chr2	protein_coding	vav 2 oncogene
chr2	27226750;27276618	27276502;27316288	-	27226750	27316288	cassetteExon	0.5	100	100	ENSMUST00000185188.8	ENSMUSG00000009621.19	Vav2	chr2	protein_coding	vav 2 oncogene
chr2	27159679	27160140	-	27159217	27160140	A3SS	0.33	50	50	ENSMUST00000185188.8	ENSMUSG00000009621.19	Vav2	chr2	protein_coding	vav 2 oncogene
chr2	27226750	27234166	-	27226750	27316288	A5SS	0.33	50	50	ENSMUST00000185188.8	ENSMUSG00000009621.19	Vav2	chr2	protein_coding	vav 2 oncogene
chr2	27159679	27160140	-	27159034	27160140	A3SS	0.33	50	50	ENSMUST00000056176.8	ENSMUSG00000009621.19	Vav2	chr2	protein_coding	vav 2 oncogene
chr2	27226750	27234166	-	27226750	27276502	A5SS	0.33	50	50	ENSMUST00000056176.8	ENSMUSG00000009621.19	Vav2	chr2	protein_coding	vav 2 oncogene
chr2	27354205	27365589	-	27354205	27365154	5pMXE	0.16	50	50	ENSMUST00000028282.15	ENSMUSG00000026918.17	Brd3	chr2	protein_coding	bromodomain containing 3
chr2	27354205	27397502	-	27354205	27365154	5pMXE	0.16	50	50	ENSMUST00000028282.15	ENSMUSG00000026918.17	Brd3	chr2	protein_coding	bromodomain containing 3
chr2	27343086;27343462	27343412;27344325	-	27343086	27344325	cassetteExon	0.5	100	100	ENSMUST00000028282.15	ENSMUSG00000026918.17	Brd3	chr2	protein_coding	bromodomain containing 3
chr2	27354205	27354334	-	27354205	27365154	A5SS	0.16	50	50	ENSMUST00000028282.15	ENSMUSG00000026918.17	Brd3	chr2	protein_coding	bromodomain containing 3
chr2	27354205	27362588	-	27354205	27365154	A5SS	0.16	50	50	ENSMUST00000028282.15	ENSMUSG00000026918.17	Brd3	chr2	protein_coding	bromodomain containing 3
chr2	27354205	27365058	-	27354205	27365154	A5SS	0.16	50	50	ENSMUST00000028282.15	ENSMUSG00000026918.17	Brd3	chr2	protein_coding	bromodomain containing 3
chr2	27354205	27397502	-	27354205	27365589	5pMXE	0.16	50	50	ENSMUST00000077737.13	ENSMUSG00000026918.17	Brd3	chr2	protein_coding	bromodomain containing 3
chr2	27354205;27362626	27362588;27365589	-	27354205	27365589	cassetteExon	0.5	100	100	ENSMUST00000077737.13	ENSMUSG00000026918.17	Brd3	chr2	protein_coding	bromodomain containing 3
chr2	27354205	27354334	-	27354205	27365589	A5SS	0.16	50	50	ENSMUST00000077737.13	ENSMUSG00000026918.17	Brd3	chr2	protein_coding	bromodomain containing 3
chr2	27354205	27365058	-	27354205	27365589	A5SS	0.16	50	50	ENSMUST00000077737.13	ENSMUSG00000026918.17	Brd3	chr2	protein_coding	bromodomain containing 3
chr2	27354205	27354334	-	27354205	27397502	A5SS	0.16	50	50	ENSMUST00000154316.8	ENSMUSG00000026918.17	Brd3	chr2	protein_coding	bromodomain containing 3
chr2	27354205	27362588	-	27354205	27397502	A5SS	0.16	50	50	ENSMUST00000154316.8	ENSMUSG00000026918.17	Brd3	chr2	protein_coding	bromodomain containing 3
chr2	27354205	27365058	-	27354205	27397502	A5SS	0.16	50	50	ENSMUST00000154316.8	ENSMUSG00000026918.17	Brd3	chr2	protein_coding	bromodomain containing 3
chr2	27354205	27354334	-	27354205	27362588	A5SS	0.2	50	50	ENSMUST00000147736.2	ENSMUSG00000026918.17	Brd3	chr2	protein_coding	bromodomain containing 3
chr2	27354205	27365058	-	27354205	27362588	A5SS&ES	0.2	50	50	ENSMUST00000147736.2	ENSMUSG00000026918.17	Brd3	chr2	protein_coding	bromodomain containing 3
chr2	27354205	27365058	-	27354205	27354334	5pMXE	0.16	50	50	ENSMUST00000144758.2	ENSMUSG00000026918.17	Brd3	chr2	protein_coding	bromodomain containing 3
chr2	27418332;27421011	27420964;27421651	+	27418332	27421651	cassetteExon	0.5	100	100	ENSMUST00000113952.10	ENSMUSG00000026917.16	Wdr5	chr2	protein_coding	WD repeat domain 5
chr2	27430532	27432741	+	27430606	27432741	A5SS	0.5	50	50	ENSMUST00000142511.2	ENSMUSG00000085929.2	Gm13421	chr2	lncRNA	predicted gene 13421
chr2	27567472	27627311	+	27566527	27627311	A5SS	0.16	50	50	ENSMUST00000129514.8	ENSMUSG00000015846.16	Rxra	chr2	protein_coding	retinoid X receptor alpha
chr2	27599384	27627311	+	27566527	27627311	A5SS	0.16	50	50	ENSMUST00000129514.8	ENSMUSG00000015846.16	Rxra	chr2	protein_coding	retinoid X receptor alpha
chr2	27600712	27627311	+	27566527	27627311	A5SS	0.16	50	50	ENSMUST00000129514.8	ENSMUSG00000015846.16	Rxra	chr2	protein_coding	retinoid X receptor alpha
chr2	27611748	27627311	+	27566527	27627311	A5SS	0.16	50	50	ENSMUST00000129514.8	ENSMUSG00000015846.16	Rxra	chr2	protein_coding	retinoid X receptor alpha
chr2	27615485	27627311	+	27566527	27627311	A5SS	0.16	50	50	ENSMUST00000129514.8	ENSMUSG00000015846.16	Rxra	chr2	protein_coding	retinoid X receptor alpha
chr2	27630494	27631065	+	27627576	27631065	A5SS	0.5	50	50	ENSMUST00000129514.8	ENSMUSG00000015846.16	Rxra	chr2	protein_coding	retinoid X receptor alpha
chr2	27599384	27627311	+	27567472	27627311	A5SS	0.16	50	50	ENSMUST00000077257.12	ENSMUSG00000015846.16	Rxra	chr2	protein_coding	retinoid X receptor alpha
chr2	27600712	27627311	+	27567472	27627311	A5SS	0.16	50	50	ENSMUST00000077257.12	ENSMUSG00000015846.16	Rxra	chr2	protein_coding	retinoid X receptor alpha
chr2	27611748	27627311	+	27567472	27627311	A5SS	0.16	50	50	ENSMUST00000077257.12	ENSMUSG00000015846.16	Rxra	chr2	protein_coding	retinoid X receptor alpha
chr2	27615485	27627311	+	27567472	27627311	A5SS	0.16	50	50	ENSMUST00000077257.12	ENSMUSG00000015846.16	Rxra	chr2	protein_coding	retinoid X receptor alpha
chr2	27600712	27627311	+	27599384	27627311	A5SS	0.16	50	50	ENSMUST00000100251.9	ENSMUSG00000015846.16	Rxra	chr2	protein_coding	retinoid X receptor alpha
chr2	27611748	27627311	+	27599384	27627311	A5SS	0.16	50	50	ENSMUST00000100251.9	ENSMUSG00000015846.16	Rxra	chr2	protein_coding	retinoid X receptor alpha
chr2	27615485	27627311	+	27599384	27627311	A5SS	0.16	50	50	ENSMUST00000100251.9	ENSMUSG00000015846.16	Rxra	chr2	protein_coding	retinoid X receptor alpha
chr2	27611748	27627311	+	27600712	27627311	A5SS	0.16	50	50	ENSMUST00000113934.2	ENSMUSG00000015846.16	Rxra	chr2	protein_coding	retinoid X receptor alpha
chr2	27615485	27627311	+	27600712	27627311	A5SS	0.16	50	50	ENSMUST00000113934.2	ENSMUSG00000015846.16	Rxra	chr2	protein_coding	retinoid X receptor alpha
chr2	27615485	27627311	+	27611748	27627311	A5SS	0.16	50	50	ENSMUST00000238859.2	ENSMUSG00000015846.16	Rxra	chr2	protein_coding	retinoid X receptor alpha
chr2	27915717;27919177	27919109;27922603	+	27915717;27919047	27918979;27922603	MXE	0.5	100	100	ENSMUST00000028280.14	ENSMUSG00000026837.17	Col5a1	chr2	protein_coding	collagen, type V, alpha 1
chr2	27908644	27914617	+	27912346	27914617	A5SS&ES	0.5	50	50	ENSMUST00000028280.14	ENSMUSG00000026837.17	Col5a1	chr2	protein_coding	collagen, type V, alpha 1
chr2	27970654	27970908	-	27970633	27970908	A3SS	0.5	50	50	ENSMUST00000028179.15	ENSMUSG00000026835.16	Fcnb	chr2	protein_coding	ficolin B
chr2	28000340	28001706	+	28000340	28011488	A3SS	0.5	50	50	ENSMUST00000126140.8	ENSMUSG00000086425.8	F730016J06Rik	chr2	lncRNA	RIKEN cDNA F730016J06 gene
chr2	28011682	28011827	+	28011682	28011960	A3SS	0.5	50	50	ENSMUST00000126140.8	ENSMUSG00000086425.8	F730016J06Rik	chr2	lncRNA	RIKEN cDNA F730016J06 gene
chr2	28008333	28011488	+	28000340	28011488	A5SS	0.5	50	50	ENSMUST00000126140.8	ENSMUSG00000086425.8	F730016J06Rik	chr2	lncRNA	RIKEN cDNA F730016J06 gene
chr2	28102699	28104621	+	28102699	28104113	3pMXE	0.5	50	50	ENSMUST00000152415.2	ENSMUSG00000026833.19	Olfm1	chr2	protein_coding	olfactomedin 1
chr2	28096111	28098090	+	28083474	28098090	A5SS	0.5	50	50	ENSMUST00000152415.2	ENSMUSG00000026833.19	Olfm1	chr2	protein_coding	olfactomedin 1
chr2	28337994	28340326	+	28337994	28338704	A3SS&ES	0.5	50	50	ENSMUST00000128199.8	ENSMUSG00000035829.14	Ppp1r26	chr2	protein_coding	protein phosphatase 1, regulatory subunit 26
chr2	28355227	28356046	-	28355227	28355712	5pMXE	0.5	50	50	ENSMUST00000126242.2	ENSMUSG00000026831.17	1700007K13Rik	chr2	protein_coding	RIKEN cDNA 1700007K13 gene
chr2	28352442	28355149	-	28352446	28355149	A3SS	0.5	50	50	ENSMUST00000126242.2	ENSMUSG00000026831.17	1700007K13Rik	chr2	protein_coding	RIKEN cDNA 1700007K13 gene
chr2	28359340	28359435	+	28358962	28359435	A5SS	0.5	50	50	ENSMUST00000038600.4	ENSMUSG00000035772.12	Mrps2	chr2	protein_coding	mitochondrial ribosomal protein S2
chr2	28432495	28432867	+	28432495	28432903	A3SS	0.5	50	50	ENSMUST00000135803.8	ENSMUSG00000026821.17	Ralgds	chr2	protein_coding	ral guanine nucleotide dissociation stimulator
chr2	28418047	28430723	+	28403572	28430723	A5SS	0.33	50	50	ENSMUST00000135803.8	ENSMUSG00000026821.17	Ralgds	chr2	protein_coding	ral guanine nucleotide dissociation stimulator
chr2	28423745	28430723	+	28403572	28430723	A5SS	0.33	50	50	ENSMUST00000135803.8	ENSMUSG00000026821.17	Ralgds	chr2	protein_coding	ral guanine nucleotide dissociation stimulator
chr2	28430832	28432302	+	28430833	28432302	A5SS	0.5	50	50	ENSMUST00000135803.8	ENSMUSG00000026821.17	Ralgds	chr2	protein_coding	ral guanine nucleotide dissociation stimulator
chr2	28432962	28433651	+	28432962	28433566	A3SS	0.5	50	50	ENSMUST00000028170.15	ENSMUSG00000026821.17	Ralgds	chr2	protein_coding	ral guanine nucleotide dissociation stimulator
chr2	28439168	28439476	+	28439168	28439302	A3SS	0.5	50	50	ENSMUST00000028170.15	ENSMUSG00000026821.17	Ralgds	chr2	protein_coding	ral guanine nucleotide dissociation stimulator
chr2	28440575	28442106	+	28440575	28442104	A3SS	0.5	50	50	ENSMUST00000028170.15	ENSMUSG00000026821.17	Ralgds	chr2	protein_coding	ral guanine nucleotide dissociation stimulator
chr2	28423745	28430723	+	28418047	28430723	A5SS	0.33	50	50	ENSMUST00000238699.2	ENSMUSG00000026821.17	Ralgds	chr2	protein_coding	ral guanine nucleotide dissociation stimulator
chr2	28452637	28464983	+	28452637;28455031	28454909;28464983	ES	0.5	50	50	ENSMUST00000177012.8	ENSMUSG00000087667.9	Gm13381	chr2	lncRNA	predicted gene 13381
chr2	28465049	28466420	+	28465049	28466408	A3SS	0.5	50	50	ENSMUST00000177012.8	ENSMUSG00000087667.9	Gm13381	chr2	lncRNA	predicted gene 13381
chr2	28469749;28471456	28471143;28472837	-	28469749	28472837	cassetteExon	0.5	100	100	ENSMUST00000113889.9	ENSMUSG00000026816.15	Gtf3c5	chr2	protein_coding	general transcription factor IIIC, polypeptide 5
chr2	28457796	28458497	-	28457814	28458497	A3SS	0.5	50	50	ENSMUST00000113889.9	ENSMUSG00000026816.15	Gtf3c5	chr2	protein_coding	general transcription factor IIIC, polypeptide 5
chr2	28501596	28502793	-	28501695	28502793	A3SS	0.5	50	50	ENSMUST00000164290.8	ENSMUSG00000026815.15	Gfi1b	chr2	protein_coding	growth factor independent 1B
chr2	28531302	28542181	+	28531331	28542181	A5SS	0.5	50	50	ENSMUST00000156857.8	ENSMUSG00000026812.17	Tsc1	chr2	protein_coding	TSC complex subunit 1
chr2	28562516	28562794	+	28562516	28562797	A3SS	0.5	50	50	ENSMUST00000028155.12	ENSMUSG00000026812.17	Tsc1	chr2	protein_coding	TSC complex subunit 1
chr2	28565260	28565655	+	28565260	28565675	A3SS	0.5	50	50	ENSMUST00000028155.12	ENSMUSG00000026812.17	Tsc1	chr2	protein_coding	TSC complex subunit 1
chr2	28568217	28568979	+	28568217	28568964	A3SS	0.5	50	50	ENSMUST00000028155.12	ENSMUSG00000026812.17	Tsc1	chr2	protein_coding	TSC complex subunit 1
chr2	28561935	28562405	+	28561893	28562405	A5SS	0.5	50	50	ENSMUST00000028155.12	ENSMUSG00000026812.17	Tsc1	chr2	protein_coding	TSC complex subunit 1
chr2	28562099	28562797	+	28562516	28562797	A5SS&ES	0.5	50	50	ENSMUST00000028155.12	ENSMUSG00000026812.17	Tsc1	chr2	protein_coding	TSC complex subunit 1
chr2	28586095	28589615	-	28586095	28589594	A5SS	0.5	50	50	ENSMUST00000102877.8	ENSMUSG00000026809.16	Spaca9	chr2	protein_coding	sperm acrosome associated 9
chr2	28590286	28591057	+	28590286	28592701	A3SS	0.5	50	50	ENSMUST00000074156.7	ENSMUSG00000026807.9	Ak8	chr2	protein_coding	adenylate kinase 8
chr2	28632373	28632672	+	28629676	28632672	A5SS	0.5	50	50	ENSMUST00000074156.7	ENSMUSG00000026807.9	Ak8	chr2	protein_coding	adenylate kinase 8
chr2	28725385	28729895	-	28725385;28726528	28726423;28729895	ES	0.33	50	50	ENSMUST00000171404.8	ENSMUSG00000035666.15	Gtf3c4	chr2	protein_coding	general transcription factor IIIC, polypeptide 4
chr2	28725385;28726139	28726037;28729895	-	28725385;28726528	28726423;28729895	MXE	0.5	100	100	ENSMUST00000171404.8	ENSMUSG00000035666.15	Gtf3c4	chr2	protein_coding	general transcription factor IIIC, polypeptide 4
chr2	28725385;28726139	28726037;28729895	-	28725385	28729895	cassetteExon	0.5	100	100	ENSMUST00000037117.6	ENSMUSG00000035666.15	Gtf3c4	chr2	protein_coding	general transcription factor IIIC, polypeptide 4
chr2	28725385;28726528	28726037;28729895	-	28725385	28729895	cassetteExon	0.5	100	100	ENSMUST00000037117.6	ENSMUSG00000035666.15	Gtf3c4	chr2	protein_coding	general transcription factor IIIC, polypeptide 4
chr2	28736049;28736883	28736775;28737453	+	28736049	28737453	cassetteExon	0.5	100	100	ENSMUST00000147779.8	ENSMUSG00000026806.16	Ddx31	chr2	protein_coding	DEAD/H box helicase 31
chr2	28749106;28749484	28749384;28749881	+	28749106	28749881	cassetteExon	0.5	100	100	ENSMUST00000113853.3	ENSMUSG00000026806.16	Ddx31	chr2	protein_coding	DEAD/H box helicase 31
chr2	28801571	28805226	-	28801576	28805226	A3SS	0.5	50	50	ENSMUST00000050776.9	ENSMUSG00000026805.15	Barhl1	chr2	protein_coding	BarH like homeobox 1
chr2	28801576	28802448	-	28801576	28805226	A5SS	0.5	50	50	ENSMUST00000050776.9	ENSMUSG00000026805.15	Barhl1	chr2	protein_coding	BarH like homeobox 1
chr2	28875913	28944826	-	28875913;28880592	28880500;28944826	ES	0.33	50	50	ENSMUST00000189027.7	ENSMUSG00000079502.9	Cfap77	chr2	protein_coding	cilia and flagella associated protein 77
chr2	28845636	28846007	-	28817963	28846007	A3SS	0.5	50	50	ENSMUST00000189027.7	ENSMUSG00000079502.9	Cfap77	chr2	protein_coding	cilia and flagella associated protein 77
chr2	28942272	28944826	-	28880592	28944826	A3SS	0.33	50	50	ENSMUST00000189027.7	ENSMUSG00000079502.9	Cfap77	chr2	protein_coding	cilia and flagella associated protein 77
chr2	28875913	28929251	-	28875913	28880500	A5SS&ES	0.33	50	50	ENSMUST00000189027.7	ENSMUSG00000079502.9	Cfap77	chr2	protein_coding	cilia and flagella associated protein 77
chr2	28942272	28944826	-	28875913	28944826	A3SS	0.33	50	50	ENSMUST00000189711.7	ENSMUSG00000079502.9	Cfap77	chr2	protein_coding	cilia and flagella associated protein 77
chr2	28875913	28929251	-	28875913	28944826	A5SS	0.33	50	50	ENSMUST00000189711.7	ENSMUSG00000079502.9	Cfap77	chr2	protein_coding	cilia and flagella associated protein 77
chr2	29015561	29015864	+	29014848	29015864	A5SS	0.5	50	50	ENSMUST00000129544.8	ENSMUSG00000043535.14	Setx	chr2	protein_coding	senataxin
chr2	29063733;29064495	29064331;29066889	+	29063733	29066889	cassetteExon	0.5	100	100	ENSMUST00000061578.9	ENSMUSG00000043535.14	Setx	chr2	protein_coding	senataxin
chr2	29051877	29052746	+	29051877	29052990	A3SS	0.5	50	50	ENSMUST00000061578.9	ENSMUSG00000043535.14	Setx	chr2	protein_coding	senataxin
chr2	29121300	29137840	-	29118233	29137840	A3SS	0.5	50	50	ENSMUST00000183583.8	ENSMUSG00000035513.20	Ntng2	chr2	protein_coding	netrin G2
chr2	29087161	29088826	-	29087161	29097404	A5SS	0.25	50	50	ENSMUST00000183583.8	ENSMUSG00000035513.20	Ntng2	chr2	protein_coding	netrin G2
chr2	29087161	29094910	-	29087161	29097404	A5SS	0.25	50	50	ENSMUST00000183583.8	ENSMUSG00000035513.20	Ntng2	chr2	protein_coding	netrin G2
chr2	29087161	29097213	-	29087161	29097404	A5SS	0.25	50	50	ENSMUST00000183583.8	ENSMUSG00000035513.20	Ntng2	chr2	protein_coding	netrin G2
chr2	29087161	29088826	-	29087161	29097213	A5SS	0.25	50	50	ENSMUST00000177689.8	ENSMUSG00000035513.20	Ntng2	chr2	protein_coding	netrin G2
chr2	29087161	29094910	-	29087161	29097213	A5SS	0.25	50	50	ENSMUST00000177689.8	ENSMUSG00000035513.20	Ntng2	chr2	protein_coding	netrin G2
chr2	29088927	29094910	-	29088927;29090960	29090886;29094910	ES	0.25	50	50	ENSMUST00000048455.9	ENSMUSG00000035513.20	Ntng2	chr2	protein_coding	netrin G2
chr2	29090960;29094020	29093883;29094910	-	29090960	29094910	cassetteExon	0.5	100	100	ENSMUST00000048455.9	ENSMUSG00000035513.20	Ntng2	chr2	protein_coding	netrin G2
chr2	29090960;29094339	29093883;29097430	-	29090960;29094936	29094910;29097430	MXE	0.5	100	100	ENSMUST00000048455.9	ENSMUSG00000035513.20	Ntng2	chr2	protein_coding	netrin G2
chr2	29087161;29088927	29088826;29094910	-	29087161	29094910	cassetteExon	0.5	100	100	ENSMUST00000102873.8	ENSMUSG00000035513.20	Ntng2	chr2	protein_coding	netrin G2
chr2	29090960	29094910	-	29087161	29094910	A3SS	0.25	50	50	ENSMUST00000102873.8	ENSMUSG00000035513.20	Ntng2	chr2	protein_coding	netrin G2
chr2	29094020	29094910	-	29087161	29094910	A3SS	0.25	50	50	ENSMUST00000102873.8	ENSMUSG00000035513.20	Ntng2	chr2	protein_coding	netrin G2
chr2	29094339	29097430	-	29094936	29097430	A3SS&ES	0.5	50	50	ENSMUST00000102873.8	ENSMUSG00000035513.20	Ntng2	chr2	protein_coding	netrin G2
chr2	29094020	29094910	-	29088927	29094910	A3SS	0.25	50	50	ENSMUST00000091153.9	ENSMUSG00000035513.20	Ntng2	chr2	protein_coding	netrin G2
chr2	29090960	29093883	-	29090961	29093883	A3SS	0.5	50	50	ENSMUST00000147897.8	ENSMUSG00000035513.20	Ntng2	chr2	protein_coding	netrin G2
chr2	29090960	29094910	-	29090960	29093883	5pMXE	0.5	50	50	ENSMUST00000143194.2	ENSMUSG00000035513.20	Ntng2	chr2	protein_coding	netrin G2
chr2	29361398	29367345	+	29361398	29390231	A3SS	0.5	50	50	ENSMUST00000028139.11	ENSMUSG00000026799.16	Med27	chr2	protein_coding	mediator complex subunit 27
chr2	29267971	29303400	+	29240002	29303400	A5SS	0.16	50	50	ENSMUST00000028139.11	ENSMUSG00000026799.16	Med27	chr2	protein_coding	mediator complex subunit 27
chr2	29268634	29303400	+	29240002	29303400	A5SS	0.16	50	50	ENSMUST00000028139.11	ENSMUSG00000026799.16	Med27	chr2	protein_coding	mediator complex subunit 27
chr2	29270016	29303400	+	29240002	29303400	A5SS	0.16	50	50	ENSMUST00000028139.11	ENSMUSG00000026799.16	Med27	chr2	protein_coding	mediator complex subunit 27
chr2	29279885	29303400	+	29240002	29303400	A5SS	0.16	50	50	ENSMUST00000028139.11	ENSMUSG00000026799.16	Med27	chr2	protein_coding	mediator complex subunit 27
chr2	29281454	29303400	+	29240002	29303400	A5SS	0.16	50	50	ENSMUST00000028139.11	ENSMUSG00000026799.16	Med27	chr2	protein_coding	mediator complex subunit 27
chr2	29386649	29390231	+	29361398	29390231	A5SS	0.5	50	50	ENSMUST00000028139.11	ENSMUSG00000026799.16	Med27	chr2	protein_coding	mediator complex subunit 27
chr2	29395028	29399435	+	29390338	29399435	A5SS	0.5	50	50	ENSMUST00000028139.11	ENSMUSG00000026799.16	Med27	chr2	protein_coding	mediator complex subunit 27
chr2	29267971	29303400	+	29267971;29279885	29279825;29303400	ES	0.2	50	50	ENSMUST00000162603.8	ENSMUSG00000026799.16	Med27	chr2	protein_coding	mediator complex subunit 27
chr2	29268634	29303400	+	29279885	29303400	A5SS&ES	0.2	50	50	ENSMUST00000162603.8	ENSMUSG00000026799.16	Med27	chr2	protein_coding	mediator complex subunit 27
chr2	29270016	29279825	+	29267971	29279825	A5SS	0.5	50	50	ENSMUST00000162603.8	ENSMUSG00000026799.16	Med27	chr2	protein_coding	mediator complex subunit 27
chr2	29270016	29303400	+	29279885	29303400	A5SS&ES	0.2	50	50	ENSMUST00000162603.8	ENSMUSG00000026799.16	Med27	chr2	protein_coding	mediator complex subunit 27
chr2	29281454	29303400	+	29279885	29303400	A5SS	0.2	50	50	ENSMUST00000162603.8	ENSMUSG00000026799.16	Med27	chr2	protein_coding	mediator complex subunit 27
chr2	29268634	29303400	+	29267971	29303400	A5SS	0.16	50	50	ENSMUST00000162597.8	ENSMUSG00000026799.16	Med27	chr2	protein_coding	mediator complex subunit 27
chr2	29270016	29303400	+	29267971	29303400	A5SS	0.16	50	50	ENSMUST00000162597.8	ENSMUSG00000026799.16	Med27	chr2	protein_coding	mediator complex subunit 27
chr2	29281454	29303400	+	29267971	29303400	A5SS	0.16	50	50	ENSMUST00000162597.8	ENSMUSG00000026799.16	Med27	chr2	protein_coding	mediator complex subunit 27
chr2	29268634	29303400	+	29268634;29270016	29269946;29303400	ES	0.25	50	50	ENSMUST00000162623.8	ENSMUSG00000026799.16	Med27	chr2	protein_coding	mediator complex subunit 27
chr2	29270016;29279885	29279825;29303400	+	29270016	29303400	cassetteExon	0.5	100	100	ENSMUST00000162623.8	ENSMUSG00000026799.16	Med27	chr2	protein_coding	mediator complex subunit 27
chr2	29281454	29303400	+	29270016	29303400	A5SS	0.25	50	50	ENSMUST00000162623.8	ENSMUSG00000026799.16	Med27	chr2	protein_coding	mediator complex subunit 27
chr2	29281454	29303400	+	29268634	29303400	A5SS	0.16	50	50	ENSMUST00000159280.8	ENSMUSG00000026799.16	Med27	chr2	protein_coding	mediator complex subunit 27
chr2	29569281	29576117	+	29569281;29569862	29569749;29576117	ES	0.5	50	50	ENSMUST00000095087.11	ENSMUSG00000039844.21	Rapgef1	chr2	protein_coding	Rap guanine nucleotide exchange factor (GEF) 1
chr2	29600320	29612236	+	29600320;29609862	29609605;29612236	ES	0.25	50	50	ENSMUST00000095087.11	ENSMUSG00000039844.21	Rapgef1	chr2	protein_coding	Rap guanine nucleotide exchange factor (GEF) 1
chr2	29609862;29610750	29610655;29612236	+	29609862	29612236	cassetteExon	0.5	100	100	ENSMUST00000095087.11	ENSMUSG00000039844.21	Rapgef1	chr2	protein_coding	Rap guanine nucleotide exchange factor (GEF) 1
chr2	29597412	29600168	+	29597412	29600165	A3SS	0.33	50	50	ENSMUST00000095087.11	ENSMUSG00000039844.21	Rapgef1	chr2	protein_coding	Rap guanine nucleotide exchange factor (GEF) 1
chr2	29622931	29623432	+	29622931	29623589	A3SS	0.5	50	50	ENSMUST00000095087.11	ENSMUSG00000039844.21	Rapgef1	chr2	protein_coding	Rap guanine nucleotide exchange factor (GEF) 1
chr2	29533926	29569145	+	29510075	29569145	A5SS	0.5	50	50	ENSMUST00000095087.11	ENSMUSG00000039844.21	Rapgef1	chr2	protein_coding	Rap guanine nucleotide exchange factor (GEF) 1
chr2	29597412;29600320	29600165;29612236	+	29597412	29612236	cassetteExon	0.5	100	100	ENSMUST00000102872.11	ENSMUSG00000039844.21	Rapgef1	chr2	protein_coding	Rap guanine nucleotide exchange factor (GEF) 1
chr2	29597412;29600320	29600168;29612236	+	29597412	29612236	cassetteExon	0.5	100	100	ENSMUST00000102872.11	ENSMUSG00000039844.21	Rapgef1	chr2	protein_coding	Rap guanine nucleotide exchange factor (GEF) 1
chr2	29609862	29612236	+	29597412	29612236	A5SS	0.25	50	50	ENSMUST00000102872.11	ENSMUSG00000039844.21	Rapgef1	chr2	protein_coding	Rap guanine nucleotide exchange factor (GEF) 1
chr2	29610750	29612236	+	29597412	29612236	A5SS	0.25	50	50	ENSMUST00000102872.11	ENSMUSG00000039844.21	Rapgef1	chr2	protein_coding	Rap guanine nucleotide exchange factor (GEF) 1
chr2	29610750	29612236	+	29600320	29612236	A5SS	0.25	50	50	ENSMUST00000147488.2	ENSMUSG00000039844.21	Rapgef1	chr2	protein_coding	Rap guanine nucleotide exchange factor (GEF) 1
chr2	29651713	29653407	+	29649537	29653407	A5SS	0.33	50	50	ENSMUST00000177379.2	ENSMUSG00000075425.11	Gm13547	chr2	protein_coding	predicted gene 13547
chr2	29651818	29653407	+	29649537	29653407	A5SS	0.33	50	50	ENSMUST00000177379.2	ENSMUSG00000075425.11	Gm13547	chr2	protein_coding	predicted gene 13547
chr2	29651713	29653407	+	29651818	29653407	A5SS	0.33	50	50	ENSMUST00000113810.9	ENSMUSG00000075425.11	Gm13547	chr2	protein_coding	predicted gene 13547
chr2	29672213	29674965	-	29672213;29673385	29673324;29674965	ES	0.5	50	50	ENSMUST00000113807.10	ENSMUSG00000039826.14	Trub2	chr2	protein_coding	TruB pseudouridine (psi) synthase family member 2
chr2	29667968	29669835	-	29651700	29669835	A3SS	0.33	50	50	ENSMUST00000113807.10	ENSMUSG00000039826.14	Trub2	chr2	protein_coding	TruB pseudouridine (psi) synthase family member 2
chr2	29668880	29669835	-	29651700	29669835	A3SS	0.33	50	50	ENSMUST00000113807.10	ENSMUSG00000039826.14	Trub2	chr2	protein_coding	TruB pseudouridine (psi) synthase family member 2
chr2	29667968	29669835	-	29667968;29668880	29668744;29669835	ES	0.5	50	50	ENSMUST00000156846.8	ENSMUSG00000039826.14	Trub2	chr2	protein_coding	TruB pseudouridine (psi) synthase family member 2
chr2	29667968	29669835	-	29668880	29669835	3pMXE	0.33	50	50	ENSMUST00000177133.8	ENSMUSG00000039826.14	Trub2	chr2	protein_coding	TruB pseudouridine (psi) synthase family member 2
chr2	29672213	29674965	-	29673385	29674965	3pMXE	0.5	50	50	ENSMUST00000113803.8	ENSMUSG00000039826.14	Trub2	chr2	protein_coding	TruB pseudouridine (psi) synthase family member 2
chr2	29685522	29685948	+	29685522	29685842	A3SS	0.5	50	50	ENSMUST00000143616.8	ENSMUSG00000026798.11	Coq4	chr2	protein_coding	coenzyme Q4
chr2	29680571	29685393	+	29680542	29685393	A5SS	0.5	50	50	ENSMUST00000143616.8	ENSMUSG00000026798.11	Coq4	chr2	protein_coding	coenzyme Q4
chr2	29680571	29685396	+	29680571	29685393	A3SS	0.5	50	50	ENSMUST00000028137.10	ENSMUSG00000026798.11	Coq4	chr2	protein_coding	coenzyme Q4
chr2	29731495;29732558	29732474;29732733	+	29731495	29732733	cassetteExon	0.5	100	100	ENSMUST00000149379.8	ENSMUSG00000069020.10	Urm1	chr2	protein_coding	ubiquitin related modifier 1
chr2	29717447	29722704	+	29710218	29722704	A5SS	0.5	50	50	ENSMUST00000149379.8	ENSMUSG00000069020.10	Urm1	chr2	protein_coding	ubiquitin related modifier 1
chr2	29717447	29731414	+	29722774	29731414	A5SS&ES	0.5	50	50	ENSMUST00000149379.8	ENSMUSG00000069020.10	Urm1	chr2	protein_coding	ubiquitin related modifier 1
chr2	29717447;29722774	29722704;29731414	+	29717447	29731414	cassetteExon	0.5	100	100	ENSMUST00000156944.8	ENSMUSG00000069020.10	Urm1	chr2	protein_coding	ubiquitin related modifier 1
chr2	29717447	29731414	+	29717447	29722704	3pMXE	0.5	50	50	ENSMUST00000130542.2	ENSMUSG00000069020.10	Urm1	chr2	protein_coding	ubiquitin related modifier 1
chr2	29759737	29761035	+	29759357	29761035	A5SS	0.5	50	50	ENSMUST00000154464.8	ENSMUSG00000039787.14	Cercam	chr2	protein_coding	cerebral endothelial cell adhesion molecule
chr2	29759737	29760885	+	29759737	29761035	A3SS	0.5	50	50	ENSMUST00000047521.7	ENSMUSG00000039787.14	Cercam	chr2	protein_coding	cerebral endothelial cell adhesion molecule
chr2	29782288	29783456	+	29782288;29783166	29783013;29783456	ES	0.5	50	50	ENSMUST00000123335.8	ENSMUSG00000026790.20	Odf2	chr2	protein_coding	outer dense fiber of sperm tails 2
chr2	29782288	29783050	+	29782288	29783013	A3SS	0.33	50	50	ENSMUST00000123335.8	ENSMUSG00000026790.20	Odf2	chr2	protein_coding	outer dense fiber of sperm tails 2
chr2	29779933	29782198	+	29779290	29782198	A5SS	0.33	50	50	ENSMUST00000123335.8	ENSMUSG00000026790.20	Odf2	chr2	protein_coding	outer dense fiber of sperm tails 2
chr2	29781014	29782198	+	29779290	29782198	A5SS	0.33	50	50	ENSMUST00000123335.8	ENSMUSG00000026790.20	Odf2	chr2	protein_coding	outer dense fiber of sperm tails 2
chr2	29783581	29791089	+	29783524	29791089	A5SS	0.5	50	50	ENSMUST00000123335.8	ENSMUSG00000026790.20	Odf2	chr2	protein_coding	outer dense fiber of sperm tails 2
chr2	29779933;29781014	29780778;29782198	+	29779933	29782198	cassetteExon	0.5	100	100	ENSMUST00000113767.8	ENSMUSG00000026790.20	Odf2	chr2	protein_coding	outer dense fiber of sperm tails 2
chr2	29779933;29781014	29780783;29782198	+	29779933	29782198	cassetteExon	0.5	100	100	ENSMUST00000113767.8	ENSMUSG00000026790.20	Odf2	chr2	protein_coding	outer dense fiber of sperm tails 2
chr2	29782288;29783166	29783050;29783456	+	29782288	29783456	cassetteExon	0.5	100	100	ENSMUST00000113767.8	ENSMUSG00000026790.20	Odf2	chr2	protein_coding	outer dense fiber of sperm tails 2
chr2	29791259	29792199	+	29791259	29792193	A3SS	0.5	50	50	ENSMUST00000113767.8	ENSMUSG00000026790.20	Odf2	chr2	protein_coding	outer dense fiber of sperm tails 2
chr2	29794119	29802578	+	29794119	29802581	A3SS	0.5	50	50	ENSMUST00000113767.8	ENSMUSG00000026790.20	Odf2	chr2	protein_coding	outer dense fiber of sperm tails 2
chr2	29793693	29793988	+	29793462	29793988	A5SS	0.5	50	50	ENSMUST00000113767.8	ENSMUSG00000026790.20	Odf2	chr2	protein_coding	outer dense fiber of sperm tails 2
chr2	29779933	29780783	+	29779933	29780778	A3SS	0.33	50	50	ENSMUST00000113763.8	ENSMUSG00000026790.20	Odf2	chr2	protein_coding	outer dense fiber of sperm tails 2
chr2	29780223	29780778	+	29779933	29780778	A5SS	0.5	50	50	ENSMUST00000113763.8	ENSMUSG00000026790.20	Odf2	chr2	protein_coding	outer dense fiber of sperm tails 2
chr2	29812383	29815952	+	29812383;29813651	29813551;29815952	ES	0.5	50	50	ENSMUST00000113757.8	ENSMUSG00000026790.20	Odf2	chr2	protein_coding	outer dense fiber of sperm tails 2
chr2	29780223	29780783	+	29779933	29780783	A5SS	0.5	50	50	ENSMUST00000046571.14	ENSMUSG00000026790.20	Odf2	chr2	protein_coding	outer dense fiber of sperm tails 2
chr2	29780223	29780783	+	29780223	29780778	A3SS	0.5	50	50	ENSMUST00000028128.13	ENSMUSG00000026790.20	Odf2	chr2	protein_coding	outer dense fiber of sperm tails 2
chr2	29779933	29782198	+	29781014	29782198	5pMXE	0.33	50	50	ENSMUST00000113764.4	ENSMUSG00000026790.20	Odf2	chr2	protein_coding	outer dense fiber of sperm tails 2
chr2	29903850	29905601	+	29903850;29904184	29904170;29905601	ES	0.5	50	50	ENSMUST00000113719.9	ENSMUSG00000057738.15	Sptan1	chr2	protein_coding	spectrin alpha, non-erythrocytic 1
chr2	29917660	29919632	+	29917660;29918718	29918656;29919632	ES	0.5	50	50	ENSMUST00000113719.9	ENSMUSG00000057738.15	Sptan1	chr2	protein_coding	spectrin alpha, non-erythrocytic 1
chr2	29855797;29858838	29858788;29868389	+	29855797	29868389	cassetteExon	0.5	100	100	ENSMUST00000113719.9	ENSMUSG00000057738.15	Sptan1	chr2	protein_coding	spectrin alpha, non-erythrocytic 1
chr2	29870214;29872246	29872178;29873172	+	29870214	29873172	cassetteExon	0.5	100	100	ENSMUST00000113719.9	ENSMUSG00000057738.15	Sptan1	chr2	protein_coding	spectrin alpha, non-erythrocytic 1
chr2	29890074;29891171	29891112;29892243	+	29890074	29892243	cassetteExon	0.5	100	100	ENSMUST00000113719.9	ENSMUSG00000057738.15	Sptan1	chr2	protein_coding	spectrin alpha, non-erythrocytic 1
chr2	29937370	29938696	-	29928438	29938696	A3SS	0.5	50	50	ENSMUST00000113711.3	ENSMUSG00000039715.9	Dync2i2	chr2	protein_coding	dynein 2 intermediate chain 2
chr2	29951825	29952065	+	29947413	29952065	A5SS	0.5	50	50	ENSMUST00000134364.8	ENSMUSG00000054766.14	Set	chr2	protein_coding	SET nuclear oncogene
chr2	29952787	29958281	+	29952292	29958281	A5SS	0.25	50	50	ENSMUST00000134364.8	ENSMUSG00000054766.14	Set	chr2	protein_coding	SET nuclear oncogene
chr2	29956905	29958281	+	29952292	29958281	A5SS	0.25	50	50	ENSMUST00000134364.8	ENSMUSG00000054766.14	Set	chr2	protein_coding	SET nuclear oncogene
chr2	29957738	29958281	+	29952292	29958281	A5SS	0.25	50	50	ENSMUST00000134364.8	ENSMUSG00000054766.14	Set	chr2	protein_coding	SET nuclear oncogene
chr2	29956905	29958281	+	29952787	29958281	A5SS	0.25	50	50	ENSMUST00000125824.8	ENSMUSG00000054766.14	Set	chr2	protein_coding	SET nuclear oncogene
chr2	29957738	29958281	+	29952787	29958281	A5SS	0.25	50	50	ENSMUST00000125824.8	ENSMUSG00000054766.14	Set	chr2	protein_coding	SET nuclear oncogene
chr2	29957738	29958281	+	29956905	29958281	A5SS	0.25	50	50	ENSMUST00000067996.7	ENSMUSG00000054766.14	Set	chr2	protein_coding	SET nuclear oncogene
chr2	29968357	29969546	+	29967811	29969546	A5SS	0.33	50	50	ENSMUST00000125346.8	ENSMUSG00000026785.15	Pkn3	chr2	protein_coding	protein kinase N3
chr2	29968802	29969546	+	29967811	29969546	A5SS	0.33	50	50	ENSMUST00000125346.8	ENSMUSG00000026785.15	Pkn3	chr2	protein_coding	protein kinase N3
chr2	29968802	29969546	+	29968357	29969546	A5SS	0.33	50	50	ENSMUST00000150770.8	ENSMUSG00000026785.15	Pkn3	chr2	protein_coding	protein kinase N3
chr2	29982553	29983459	-	29982553	29983501	A5SS	0.5	50	50	ENSMUST00000102865.11	ENSMUSG00000015335.17	Zdhhc12	chr2	protein_coding	zinc finger, DHHC domain containing 12
chr2	29991967	29992741	-	29991965	29992741	A3SS	0.5	50	50	ENSMUST00000044751.14	ENSMUSG00000039686.15	Zer1	chr2	protein_coding	zyg-11 related, cell cycle regulator
chr2	29997007	29997507	-	29995034	29997507	A3SS	0.33	50	50	ENSMUST00000044751.14	ENSMUSG00000039686.15	Zer1	chr2	protein_coding	zyg-11 related, cell cycle regulator
chr2	29997403	29997507	-	29995034	29997507	A3SS	0.33	50	50	ENSMUST00000044751.14	ENSMUSG00000039686.15	Zer1	chr2	protein_coding	zyg-11 related, cell cycle regulator
chr2	30000393	30000674	-	30000432	30000674	A3SS	0.5	50	50	ENSMUST00000044751.14	ENSMUSG00000039686.15	Zer1	chr2	protein_coding	zyg-11 related, cell cycle regulator
chr2	29997403	29997507	-	29997007	29997507	A3SS	0.33	50	50	ENSMUST00000139128.2	ENSMUSG00000039686.15	Zer1	chr2	protein_coding	zyg-11 related, cell cycle regulator
chr2	30024882	30026685	+	30024882;30025564	30025421;30026685	ES	0.5	50	50	ENSMUST00000136183.8	ENSMUSG00000039678.13	Tbc1d13	chr2	protein_coding	TBC1 domain family, member 13
chr2	30026725;30026995	30026880;30027133	+	30026725	30027133	cassetteExon	0.5	100	100	ENSMUST00000136183.8	ENSMUSG00000039678.13	Tbc1d13	chr2	protein_coding	TBC1 domain family, member 13
chr2	30024882	30025381	+	30024882	30025421	A3SS	0.33	50	50	ENSMUST00000136183.8	ENSMUSG00000039678.13	Tbc1d13	chr2	protein_coding	TBC1 domain family, member 13
chr2	30024882;30025564	30025381;30026685	+	30024882	30026685	cassetteExon	0.5	100	100	ENSMUST00000044556.12	ENSMUSG00000039678.13	Tbc1d13	chr2	protein_coding	TBC1 domain family, member 13
chr2	30066014	30066374	-	30066003	30066374	A3SS	0.5	50	50	ENSMUST00000142669.8	ENSMUSG00000039660.17	Spout1	chr2	protein_coding	SPOUT domain containing methyltransferase 1
chr2	30066676	30066740	-	30066676	30066751	A5SS	0.5	50	50	ENSMUST00000142669.8	ENSMUSG00000039660.17	Spout1	chr2	protein_coding	SPOUT domain containing methyltransferase 1
chr2	30077319	30078065	-	30077319;30077829	30077701;30078065	ES	0.5	50	50	ENSMUST00000044038.10	ENSMUSG00000039648.15	Kyat1	chr2	protein_coding	kynurenine aminotransferase 1
chr2	30078151	30081937	-	30078151;30078376	30078227;30081937	ES	0.33	50	50	ENSMUST00000044038.10	ENSMUSG00000039648.15	Kyat1	chr2	protein_coding	kynurenine aminotransferase 1
chr2	30082084;30082297	30082200;30084066	-	30082084	30084066	cassetteExon	0.5	100	100	ENSMUST00000044038.10	ENSMUSG00000039648.15	Kyat1	chr2	protein_coding	kynurenine aminotransferase 1
chr2	30084124;30088171	30087969;30095645	-	30084124	30095645	cassetteExon	0.5	100	100	ENSMUST00000044038.10	ENSMUSG00000039648.15	Kyat1	chr2	protein_coding	kynurenine aminotransferase 1
chr2	30081534	30081937	-	30078376	30081937	A3SS	0.33	50	50	ENSMUST00000044038.10	ENSMUSG00000039648.15	Kyat1	chr2	protein_coding	kynurenine aminotransferase 1
chr2	30084172	30095645	-	30084124	30095645	A3SS	0.33	50	50	ENSMUST00000044038.10	ENSMUSG00000039648.15	Kyat1	chr2	protein_coding	kynurenine aminotransferase 1
chr2	30088171	30095645	-	30084172	30095645	A3SS	0.33	50	50	ENSMUST00000113662.8	ENSMUSG00000039648.15	Kyat1	chr2	protein_coding	kynurenine aminotransferase 1
chr2	30084124	30095645	-	30084124	30087969	5pMXE	0.5	50	50	ENSMUST00000113661.10	ENSMUSG00000039648.15	Kyat1	chr2	protein_coding	kynurenine aminotransferase 1
chr2	30081534	30081937	-	30078151	30081937	A3SS	0.33	50	50	ENSMUST00000113659.8	ENSMUSG00000039648.15	Kyat1	chr2	protein_coding	kynurenine aminotransferase 1
chr2	30127817;30130689	30130581;30145180	+	30127817	30145180	cassetteExon	0.5	100	100	ENSMUST00000113654.8	ENSMUSG00000007476.19	Lrrc8a	chr2	protein_coding	leucine rich repeat containing 8A VRAC subunit A
chr2	30127817	30145180	+	30130689	30145180	5pMXE	0.5	50	50	ENSMUST00000139454.3	ENSMUSG00000099041.2	Gm28035	chr2	protein_coding	predicted gene, 28035
chr2	30167070	30167635	+	30167070;30167222	30167160;30167635	ES	0.5	50	50	ENSMUST00000139454.3	ENSMUSG00000099041.2	Gm28035	chr2	protein_coding	predicted gene, 28035
chr2	30167222	30169967	+	30167222;30167656	30167635;30169967	ES	0.25	50	50	ENSMUST00000139454.3	ENSMUSG00000099041.2	Gm28035	chr2	protein_coding	predicted gene, 28035
chr2	30170095	30171022	+	30170095;30170299	30170183;30171022	ES	0.5	50	50	ENSMUST00000139454.3	ENSMUSG00000099041.2	Gm28035	chr2	protein_coding	predicted gene, 28035
chr2	30171148	30186660	+	30171148	30171782	3pMXE	0.5	50	50	ENSMUST00000139454.3	ENSMUSG00000099041.2	Gm28035	chr2	protein_coding	predicted gene, 28035
chr2	30167656	30169407	+	30167656	30169967	A3SS	0.5	50	50	ENSMUST00000139454.3	ENSMUSG00000099041.2	Gm28035	chr2	protein_coding	predicted gene, 28035
chr2	30156637	30156875	+	30152438	30156875	A5SS	0.33	50	50	ENSMUST00000139454.3	ENSMUSG00000099041.2	Gm28035	chr2	protein_coding	predicted gene, 28035
chr2	30156802	30156875	+	30152438	30156875	A5SS	0.33	50	50	ENSMUST00000139454.3	ENSMUSG00000099041.2	Gm28035	chr2	protein_coding	predicted gene, 28035
chr2	30156802	30159701	+	30156953	30159701	A5SS&ES	0.5	50	50	ENSMUST00000139454.3	ENSMUSG00000099041.2	Gm28035	chr2	protein_coding	predicted gene, 28035
chr2	30159859	30167015	+	30164735	30167015	A5SS&ES	0.5	50	50	ENSMUST00000139454.3	ENSMUSG00000099041.2	Gm28035	chr2	protein_coding	predicted gene, 28035
chr2	30167841	30169967	+	30167656	30169967	A5SS	0.25	50	50	ENSMUST00000139454.3	ENSMUSG00000099041.2	Gm28035	chr2	protein_coding	predicted gene, 28035
chr2	30156802	30156875	+	30156637	30156875	A5SS	0.33	50	50	ENSMUST00000154647.8	ENSMUSG00000079484.13	Phyhd1	chr2	protein_coding	phytanoyl-CoA dioxygenase domain containing 1
chr2	30156802	30159701	+	30156802;30156953	30156875;30159701	ES	0.5	50	50	ENSMUST00000113645.8	ENSMUSG00000079484.13	Phyhd1	chr2	protein_coding	phytanoyl-CoA dioxygenase domain containing 1
chr2	30170095	30171022	+	30170095	30170183	3pMXE	0.5	50	50	ENSMUST00000139719.8	ENSMUSG00000079484.13	Phyhd1	chr2	protein_coding	phytanoyl-CoA dioxygenase domain containing 1
chr2	30167070;30167222	30167160;30169967	+	30167070;30167656	30167635;30169967	MXE	0.5	100	100	ENSMUST00000113643.8	ENSMUSG00000079484.13	Phyhd1	chr2	protein_coding	phytanoyl-CoA dioxygenase domain containing 1
chr2	30159859;30164735	30164482;30167015	+	30159859	30167015	cassetteExon	0.5	100	100	ENSMUST00000085290.4	ENSMUSG00000079484.13	Phyhd1	chr2	protein_coding	phytanoyl-CoA dioxygenase domain containing 1
chr2	30159859;30167222	30167015;30169967	+	30159859;30164735	30164482;30169967	MXE	0.5	100	100	ENSMUST00000150695.8	ENSMUSG00000079484.13	Phyhd1	chr2	protein_coding	phytanoyl-CoA dioxygenase domain containing 1
chr2	30164735;30167222	30167015;30169967	+	30164735	30169967	cassetteExon	0.5	100	100	ENSMUST00000150695.8	ENSMUSG00000079484.13	Phyhd1	chr2	protein_coding	phytanoyl-CoA dioxygenase domain containing 1
chr2	30167656	30169967	+	30164735	30169967	A5SS	0.25	50	50	ENSMUST00000150695.8	ENSMUSG00000079484.13	Phyhd1	chr2	protein_coding	phytanoyl-CoA dioxygenase domain containing 1
chr2	30167841	30169967	+	30164735	30169967	A5SS	0.25	50	50	ENSMUST00000150695.8	ENSMUSG00000079484.13	Phyhd1	chr2	protein_coding	phytanoyl-CoA dioxygenase domain containing 1
chr2	30167070;30167841	30167635;30169967	+	30167070;30167222	30167160;30169967	MXE	0.5	100	100	ENSMUST00000127689.8	ENSMUSG00000079484.13	Phyhd1	chr2	protein_coding	phytanoyl-CoA dioxygenase domain containing 1
chr2	30167222;30167841	30167635;30169967	+	30167222	30169967	cassetteExon	0.5	100	100	ENSMUST00000127689.8	ENSMUSG00000079484.13	Phyhd1	chr2	protein_coding	phytanoyl-CoA dioxygenase domain containing 1
chr2	30186714	30190812	+	30186714;30188501	30188428;30190812	ES	0.5	50	50	ENSMUST00000143119.3	ENSMUSG00000098794.2	Gm28038	chr2	protein_coding	predicted gene, 28038
chr2	30176482	30186660	+	30171148	30186660	A5SS	0.5	50	50	ENSMUST00000143119.3	ENSMUSG00000098794.2	Gm28038	chr2	protein_coding	predicted gene, 28038
chr2	30191101	30192013	+	30191101	30191964	A3SS	0.33	50	50	ENSMUST00000148969.8	ENSMUSG00000052533.15	Nup188	chr2	protein_coding	nucleoporin 188
chr2	30191101	30192017	+	30191101	30191964	A3SS	0.33	50	50	ENSMUST00000148969.8	ENSMUSG00000052533.15	Nup188	chr2	protein_coding	nucleoporin 188
chr2	30192057	30193672	+	30192057	30194069	A3SS	0.5	50	50	ENSMUST00000148969.8	ENSMUSG00000052533.15	Nup188	chr2	protein_coding	nucleoporin 188
chr2	30191101	30192017	+	30191101	30192013	A3SS	0.33	50	50	ENSMUST00000064447.12	ENSMUSG00000052533.15	Nup188	chr2	protein_coding	nucleoporin 188
chr2	30235951	30236365	-	30235951;30236085	30236071;30236365	ES	0.5	50	50	ENSMUST00000100215.11	ENSMUSG00000026860.17	Sh3glb2	chr2	protein_coding	SH3-domain GRB2-like endophilin B2
chr2	30237116	30240300	-	30237116;30238629	30238567;30240300	ES	0.25	50	50	ENSMUST00000100215.11	ENSMUSG00000026860.17	Sh3glb2	chr2	protein_coding	SH3-domain GRB2-like endophilin B2
chr2	30238629;30239249	30239238;30240300	-	30238629	30240300	cassetteExon	0.5	100	100	ENSMUST00000100215.11	ENSMUSG00000026860.17	Sh3glb2	chr2	protein_coding	SH3-domain GRB2-like endophilin B2
chr2	30238629;30239616	30239238;30240300	-	30238629	30240300	cassetteExon	0.5	100	100	ENSMUST00000100215.11	ENSMUSG00000026860.17	Sh3glb2	chr2	protein_coding	SH3-domain GRB2-like endophilin B2
chr2	30244993	30245248	-	30244993	30245273	A5SS	0.5	50	50	ENSMUST00000100215.11	ENSMUSG00000026860.17	Sh3glb2	chr2	protein_coding	SH3-domain GRB2-like endophilin B2
chr2	30239249	30240300	-	30237116	30240300	A3SS	0.25	50	50	ENSMUST00000113620.10	ENSMUSG00000026860.17	Sh3glb2	chr2	protein_coding	SH3-domain GRB2-like endophilin B2
chr2	30239616	30240300	-	30237116	30240300	A3SS	0.25	50	50	ENSMUST00000113620.10	ENSMUSG00000026860.17	Sh3glb2	chr2	protein_coding	SH3-domain GRB2-like endophilin B2
chr2	30239616	30240300	-	30239249	30240300	A3SS	0.25	50	50	ENSMUST00000113621.10	ENSMUSG00000026860.17	Sh3glb2	chr2	protein_coding	SH3-domain GRB2-like endophilin B2
chr2	30235951	30236365	-	30235951	30236071	5pMXE	0.5	50	50	ENSMUST00000142689.2	ENSMUSG00000026860.17	Sh3glb2	chr2	protein_coding	SH3-domain GRB2-like endophilin B2
chr2	30245414	30249155	-	30240729	30249155	A3SS	0.5	50	50	ENSMUST00000128387.8	ENSMUSG00000026860.17	Sh3glb2	chr2	protein_coding	SH3-domain GRB2-like endophilin B2
chr2	30240729	30244865	-	30240729	30249155	A5SS	0.5	50	50	ENSMUST00000128387.8	ENSMUSG00000026860.17	Sh3glb2	chr2	protein_coding	SH3-domain GRB2-like endophilin B2
chr2	30237116	30240300	-	30238629	30240300	3pMXE	0.25	50	50	ENSMUST00000140899.8	ENSMUSG00000026860.17	Sh3glb2	chr2	protein_coding	SH3-domain GRB2-like endophilin B2
chr2	30238629	30240300	-	30239616	30240300	3pMXE	0.25	50	50	ENSMUST00000151145.8	ENSMUSG00000026860.17	Sh3glb2	chr2	protein_coding	SH3-domain GRB2-like endophilin B2
chr2	30273031	30273941	+	30273031;30273718	30273602;30273941	ES	0.5	50	50	ENSMUST00000077977.14	ENSMUSG00000026858.19	Miga2	chr2	protein_coding	mitoguardin 2
chr2	30257799	30258594	+	30257799	30258889	A3SS	0.5	50	50	ENSMUST00000077977.14	ENSMUSG00000026858.19	Miga2	chr2	protein_coding	mitoguardin 2
chr2	30254559	30257564	+	30254317	30257564	A5SS	0.33	50	50	ENSMUST00000077977.14	ENSMUSG00000026858.19	Miga2	chr2	protein_coding	mitoguardin 2
chr2	30254587	30257564	+	30254317	30257564	A5SS	0.33	50	50	ENSMUST00000077977.14	ENSMUSG00000026858.19	Miga2	chr2	protein_coding	mitoguardin 2
chr2	30272089	30272978	+	30272085	30272978	A5SS	0.5	50	50	ENSMUST00000077977.14	ENSMUSG00000026858.19	Miga2	chr2	protein_coding	mitoguardin 2
chr2	30254587	30257564	+	30254559	30257564	A5SS	0.33	50	50	ENSMUST00000142801.8	ENSMUSG00000026858.19	Miga2	chr2	protein_coding	mitoguardin 2
chr2	30285771	30286165	+	30285771;30286073	30285989;30286165	ES	0.5	50	50	ENSMUST00000028209.15	ENSMUSG00000026856.15	Dolpp1	chr2	protein_coding	dolichyl pyrophosphate phosphatase 1
chr2	30286542	30287480	+	30286542;30287159	30287031;30287480	ES	0.33	50	50	ENSMUST00000028209.15	ENSMUSG00000026856.15	Dolpp1	chr2	protein_coding	dolichyl pyrophosphate phosphatase 1
chr2	30282524;30283865	30283659;30285671	+	30282524	30285671	cassetteExon	0.5	100	100	ENSMUST00000028209.15	ENSMUSG00000026856.15	Dolpp1	chr2	protein_coding	dolichyl pyrophosphate phosphatase 1
chr2	30286264	30290350	+	30286264	30286444	A3SS&ES	0.33	50	50	ENSMUST00000028209.15	ENSMUSG00000026856.15	Dolpp1	chr2	protein_coding	dolichyl pyrophosphate phosphatase 1
chr2	30286264	30287480	+	30286264;30286542	30286444;30287480	ES	0.33	50	50	ENSMUST00000113612.10	ENSMUSG00000026856.15	Dolpp1	chr2	protein_coding	dolichyl pyrophosphate phosphatase 1
chr2	30286542	30287480	+	30286542	30287031	3pMXE	0.5	50	50	ENSMUST00000156059.8	ENSMUSG00000026856.15	Dolpp1	chr2	protein_coding	dolichyl pyrophosphate phosphatase 1
chr2	30285771	30286165	+	30285771	30285989	A3SS	0.5	50	50	ENSMUST00000156984.8	ENSMUSG00000026856.15	Dolpp1	chr2	protein_coding	dolichyl pyrophosphate phosphatase 1
chr2	30287159	30287480	+	30286264	30287480	A5SS	0.33	50	50	ENSMUST00000155196.2	ENSMUSG00000026856.15	Dolpp1	chr2	protein_coding	dolichyl pyrophosphate phosphatase 1
chr2	30286264	30287480	+	30286264	30290350	A3SS	0.33	50	50	ENSMUST00000151018.2	ENSMUSG00000026856.15	Dolpp1	chr2	protein_coding	dolichyl pyrophosphate phosphatase 1
chr2	30303258;30304008	30303641;30305324	-	30303258	30305324	cassetteExon	0.5	100	100	ENSMUST00000102855.8	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30303258;30304008	30303872;30305324	-	30303258	30305324	cassetteExon	0.5	100	100	ENSMUST00000102855.8	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30303258;30304220	30303872;30305324	-	30303258	30305324	cassetteExon	0.5	100	100	ENSMUST00000102855.8	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30303258;30304372	30303872;30305324	-	30303258	30305324	cassetteExon	0.5	100	100	ENSMUST00000102855.8	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30303258;30304372	30304280;30305324	-	30303258	30305324	cassetteExon	0.5	100	100	ENSMUST00000102855.8	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30293653	30294540	-	30293638	30294540	A3SS	0.5	50	50	ENSMUST00000102855.8	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30304834	30305324	-	30303258	30305324	A3SS	0.2	50	50	ENSMUST00000102855.8	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30292805	30293573	-	30292805	30293501	A5SS	0.5	50	50	ENSMUST00000102855.8	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30296480	30296655	-	30296480	30296968	A5SS	0.5	50	50	ENSMUST00000102855.8	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30303258	30305207	-	30303258	30305324	A5SS	0.2	50	50	ENSMUST00000102855.8	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30303258;30304008	30303641;30305324	-	30303258;30304372	30304280;30305324	MXE	0.5	100	100	ENSMUST00000102854.10	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30303258;30304008	30303872;30305324	-	30303258;30304372	30304280;30305324	MXE	0.5	100	100	ENSMUST00000102854.10	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30303258;30304220	30303872;30305324	-	30303258;30304372	30304280;30305324	MXE	0.5	100	100	ENSMUST00000102854.10	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30304834	30305324	-	30304372	30305324	A3SS	0.2	50	50	ENSMUST00000102854.10	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30303258	30305207	-	30303258	30304280	A5SS&ES	0.2	50	50	ENSMUST00000102854.10	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30303258	30305207	-	30303258;30304008	30303872;30305207	ES	0.33	50	50	ENSMUST00000132981.9	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30304008	30305324	-	30304008	30305207	5pMXE	0.5	50	50	ENSMUST00000132981.9	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30303258;30303789	30303641;30305207	-	30303258;30304008	30303872;30305207	MXE	0.5	100	100	ENSMUST00000132981.9	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30303258	30304280	-	30303258	30303872	A5SS&ES	0.25	50	50	ENSMUST00000132981.9	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30303258;30303789	30303641;30305207	-	30303258	30305207	cassetteExon	0.5	100	100	ENSMUST00000156702.2	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30303258;30304008	30303641;30305207	-	30303258	30305207	cassetteExon	0.5	100	100	ENSMUST00000156702.2	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30303258	30305324	-	30303258	30304280	5pMXE	0.2	50	50	ENSMUST00000146822.2	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30303258	30303641	-	30303258	30304280	A5SS	0.2	50	50	ENSMUST00000146822.2	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30304220	30305324	-	30304008	30305324	A3SS	0.2	50	50	ENSMUST00000134120.2	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30304834	30305324	-	30304008	30305324	A3SS	0.2	50	50	ENSMUST00000134120.2	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30303258	30303641	-	30303258	30303872	A5SS	0.2	50	50	ENSMUST00000134120.2	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30303258	30305207	-	30303258	30303872	A5SS&ES	0.2	50	50	ENSMUST00000134120.2	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30303258	30305324	-	30303258	30303641	A5SS&ES	0.2	50	50	ENSMUST00000129494.2	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30303258	30305324	-	30304220	30305324	3pMXE	0.2	50	50	ENSMUST00000128593.2	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30304372	30305324	-	30304220	30305324	A3SS	0.2	50	50	ENSMUST00000128593.2	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30304834	30305324	-	30304220	30305324	A3SS	0.2	50	50	ENSMUST00000128593.2	ENSMUSG00000026853.16	Crat	chr2	protein_coding	carnitine acetyltransferase
chr2	30306344	30318328	+	30306344;30316508	30316411;30318328	ES	0.33	50	50	ENSMUST00000042055.10	ENSMUSG00000039515.12	Ptpa	chr2	protein_coding	protein phosphatase 2 protein activator
chr2	30318414	30325576	+	30318414;30322098	30321973;30325576	ES	0.5	50	50	ENSMUST00000042055.10	ENSMUSG00000039515.12	Ptpa	chr2	protein_coding	protein phosphatase 2 protein activator
chr2	30333409;30335714	30335593;30336389	+	30333409	30336389	cassetteExon	0.5	100	100	ENSMUST00000042055.10	ENSMUSG00000039515.12	Ptpa	chr2	protein_coding	protein phosphatase 2 protein activator
chr2	30333409;30335724	30335593;30336389	+	30333409	30336389	cassetteExon	0.5	100	100	ENSMUST00000042055.10	ENSMUSG00000039515.12	Ptpa	chr2	protein_coding	protein phosphatase 2 protein activator
chr2	30333409;30335962	30335593;30336389	+	30333409	30336389	cassetteExon	0.5	100	100	ENSMUST00000042055.10	ENSMUSG00000039515.12	Ptpa	chr2	protein_coding	protein phosphatase 2 protein activator
chr2	30316531	30318328	+	30316508	30318328	A5SS	0.33	50	50	ENSMUST00000042055.10	ENSMUSG00000039515.12	Ptpa	chr2	protein_coding	protein phosphatase 2 protein activator
chr2	30331990	30333302	+	30329776	30333302	A5SS	0.25	50	50	ENSMUST00000042055.10	ENSMUSG00000039515.12	Ptpa	chr2	protein_coding	protein phosphatase 2 protein activator
chr2	30333018	30333302	+	30329776	30333302	A5SS	0.25	50	50	ENSMUST00000042055.10	ENSMUSG00000039515.12	Ptpa	chr2	protein_coding	protein phosphatase 2 protein activator
chr2	30306344	30318328	+	30306344	30316411	A3SS&ES	0.5	50	50	ENSMUST00000113601.10	ENSMUSG00000039515.12	Ptpa	chr2	protein_coding	protein phosphatase 2 protein activator
chr2	30316508	30318328	+	30316508	30333302	A3SS	0.5	50	50	ENSMUST00000113601.10	ENSMUSG00000039515.12	Ptpa	chr2	protein_coding	protein phosphatase 2 protein activator
chr2	30329776	30333302	+	30316508	30333302	A5SS	0.25	50	50	ENSMUST00000113601.10	ENSMUSG00000039515.12	Ptpa	chr2	protein_coding	protein phosphatase 2 protein activator
chr2	30331990	30333302	+	30316508	30333302	A5SS	0.25	50	50	ENSMUST00000113601.10	ENSMUSG00000039515.12	Ptpa	chr2	protein_coding	protein phosphatase 2 protein activator
chr2	30333018	30333302	+	30316508	30333302	A5SS	0.25	50	50	ENSMUST00000113601.10	ENSMUSG00000039515.12	Ptpa	chr2	protein_coding	protein phosphatase 2 protein activator
chr2	30306344	30318328	+	30306344;30316531	30316411;30318328	ES	0.33	50	50	ENSMUST00000152165.8	ENSMUSG00000039515.12	Ptpa	chr2	protein_coding	protein phosphatase 2 protein activator
chr2	30318414	30325576	+	30318414	30321973	3pMXE	0.5	50	50	ENSMUST00000152165.8	ENSMUSG00000039515.12	Ptpa	chr2	protein_coding	protein phosphatase 2 protein activator
chr2	30335714	30336389	+	30335724	30336389	A5SS	0.25	50	50	ENSMUST00000125561.7	ENSMUSG00000039515.12	Ptpa	chr2	protein_coding	protein phosphatase 2 protein activator
chr2	30335962	30336389	+	30335724	30336389	A5SS	0.25	50	50	ENSMUST00000125561.7	ENSMUSG00000039515.12	Ptpa	chr2	protein_coding	protein phosphatase 2 protein activator
chr2	30333018	30333302	+	30331990	30333302	A5SS	0.25	50	50	ENSMUST00000131476.8	ENSMUSG00000039515.12	Ptpa	chr2	protein_coding	protein phosphatase 2 protein activator
chr2	30333409	30336389	+	30335714	30336389	5pMXE	0.25	50	50	ENSMUST00000130741.2	ENSMUSG00000039515.12	Ptpa	chr2	protein_coding	protein phosphatase 2 protein activator
chr2	30335962	30336389	+	30335714	30336389	A5SS	0.25	50	50	ENSMUST00000130741.2	ENSMUSG00000039515.12	Ptpa	chr2	protein_coding	protein phosphatase 2 protein activator
chr2	30333409	30336389	+	30335962	30336389	5pMXE	0.25	50	50	ENSMUST00000135105.2	ENSMUSG00000039515.12	Ptpa	chr2	protein_coding	protein phosphatase 2 protein activator
chr2	30495638	30498172	+	30485086	30498172	A5SS	0.5	50	50	ENSMUST00000102853.4	ENSMUSG00000047363.5	Cstad	chr2	protein_coding	CSA-conditional, T cell activation-dependent protein
chr2	30549001;30549897	30549812;30559845	-	30549001	30559845	cassetteExon	0.5	100	100	ENSMUST00000147959.2	ENSMUSG00000087268.2	Gm14486	chr2	lncRNA	predicted gene 14486
chr2	30690828	30693562	-	30690828;30691013	30690926;30693562	ES	0.5	50	50	ENSMUST00000139968.8	ENSMUSG00000044320.15	1700001O22Rik	chr2	protein_coding	RIKEN cDNA 1700001O22 gene
chr2	30686223	30686413	-	30686295	30686413	A3SS	0.5	50	50	ENSMUST00000139968.8	ENSMUSG00000044320.15	1700001O22Rik	chr2	protein_coding	RIKEN cDNA 1700001O22 gene
chr2	30687622	30687880	-	30686578	30687880	A3SS	0.5	50	50	ENSMUST00000139968.8	ENSMUSG00000044320.15	1700001O22Rik	chr2	protein_coding	RIKEN cDNA 1700001O22 gene
chr2	30688040	30690736	-	30687992	30690736	A3SS	0.5	50	50	ENSMUST00000139968.8	ENSMUSG00000044320.15	1700001O22Rik	chr2	protein_coding	RIKEN cDNA 1700001O22 gene
chr2	30685817	30686121	-	30685817	30686157	A5SS	0.5	50	50	ENSMUST00000139968.8	ENSMUSG00000044320.15	1700001O22Rik	chr2	protein_coding	RIKEN cDNA 1700001O22 gene
chr2	30686295	30686558	-	30686295	30686413	A5SS	0.5	50	50	ENSMUST00000139968.8	ENSMUSG00000044320.15	1700001O22Rik	chr2	protein_coding	RIKEN cDNA 1700001O22 gene
chr2	30686578	30686799	-	30686578	30687880	A5SS	0.5	50	50	ENSMUST00000139968.8	ENSMUSG00000044320.15	1700001O22Rik	chr2	protein_coding	RIKEN cDNA 1700001O22 gene
chr2	30687992	30690720	-	30687992	30690736	A5SS	0.5	50	50	ENSMUST00000139968.8	ENSMUSG00000044320.15	1700001O22Rik	chr2	protein_coding	RIKEN cDNA 1700001O22 gene
chr2	30691013	30691152	-	30691013	30693562	A5SS	0.5	50	50	ENSMUST00000139968.8	ENSMUSG00000044320.15	1700001O22Rik	chr2	protein_coding	RIKEN cDNA 1700001O22 gene
chr2	30690828	30693562	-	30690828	30690926	5pMXE	0.5	50	50	ENSMUST00000138959.8	ENSMUSG00000044320.15	1700001O22Rik	chr2	protein_coding	RIKEN cDNA 1700001O22 gene
chr2	30698095;30705510	30705371;30709641	+	30698095	30709641	cassetteExon	0.5	100	100	ENSMUST00000041830.10	ENSMUSG00000026857.10	Ntmt1	chr2	protein_coding	N-terminal Xaa-Pro-Lys N-methyltransferase 1
chr2	30698095	30703659	+	30698095	30709641	A3SS	0.33	50	50	ENSMUST00000041830.10	ENSMUSG00000026857.10	Ntmt1	chr2	protein_coding	N-terminal Xaa-Pro-Lys N-methyltransferase 1
chr2	30710713	30712268	+	30710713	30712374	A3SS	0.5	50	50	ENSMUST00000041830.10	ENSMUSG00000026857.10	Ntmt1	chr2	protein_coding	N-terminal Xaa-Pro-Lys N-methyltransferase 1
chr2	30698377	30709641	+	30698095	30709641	A5SS	0.25	50	50	ENSMUST00000041830.10	ENSMUSG00000026857.10	Ntmt1	chr2	protein_coding	N-terminal Xaa-Pro-Lys N-methyltransferase 1
chr2	30708141	30709641	+	30698095	30709641	A5SS	0.25	50	50	ENSMUST00000041830.10	ENSMUSG00000026857.10	Ntmt1	chr2	protein_coding	N-terminal Xaa-Pro-Lys N-methyltransferase 1
chr2	30709780	30710461	+	30709844	30710461	A5SS	0.5	50	50	ENSMUST00000041830.10	ENSMUSG00000026857.10	Ntmt1	chr2	protein_coding	N-terminal Xaa-Pro-Lys N-methyltransferase 1
chr2	30698095;30703767	30703659;30705371	+	30698095	30705371	cassetteExon	0.5	100	100	ENSMUST00000152374.8	ENSMUSG00000026857.10	Ntmt1	chr2	protein_coding	N-terminal Xaa-Pro-Lys N-methyltransferase 1
chr2	30705510	30706013	+	30705510	30709641	A3SS	0.5	50	50	ENSMUST00000152374.8	ENSMUSG00000026857.10	Ntmt1	chr2	protein_coding	N-terminal Xaa-Pro-Lys N-methyltransferase 1
chr2	30698377	30709641	+	30705510	30709641	A5SS&ES	0.25	50	50	ENSMUST00000152374.8	ENSMUSG00000026857.10	Ntmt1	chr2	protein_coding	N-terminal Xaa-Pro-Lys N-methyltransferase 1
chr2	30708141	30709641	+	30705510	30709641	A5SS	0.25	50	50	ENSMUST00000152374.8	ENSMUSG00000026857.10	Ntmt1	chr2	protein_coding	N-terminal Xaa-Pro-Lys N-methyltransferase 1
chr2	30708141	30709641	+	30698377	30709641	A5SS	0.25	50	50	ENSMUST00000129712.3	ENSMUSG00000026857.10	Ntmt1	chr2	protein_coding	N-terminal Xaa-Pro-Lys N-methyltransferase 1
chr2	30717110	30718008	-	30717110	30718086	A5SS	0.5	50	50	ENSMUST00000148036.7	ENSMUSG00000039483.11	Asb6	chr2	protein_coding	ankyrin repeat and SOCS box-containing 6
chr2	30735693	30768422	+	30725264	30768422	A5SS	0.5	50	50	ENSMUST00000113592.9	ENSMUSG00000039476.14	Prrx2	chr2	protein_coding	paired related homeobox 2
chr2	30782838	30787375	-	30782838	30790879	A5SS	0.5	50	50	ENSMUST00000102852.6	ENSMUSG00000050737.14	Ptges	chr2	protein_coding	prostaglandin E synthase
chr2	30790961	30791726	-	30790961	30793102	A5SS	0.5	50	50	ENSMUST00000102852.6	ENSMUSG00000050737.14	Ptges	chr2	protein_coding	prostaglandin E synthase
chr2	30844029	30845780	+	30844029	30845790	A3SS	0.5	50	50	ENSMUST00000028199.12	ENSMUSG00000026848.15	Tor1b	chr2	protein_coding	torsin family 1, member B
chr2	30843904	30845790	+	30844029	30845790	A5SS	0.5	50	50	ENSMUST00000028199.12	ENSMUSG00000026848.15	Tor1b	chr2	protein_coding	torsin family 1, member B
chr2	30844020	30845780	+	30844029	30845780	A5SS	0.33	50	50	ENSMUST00000135507.8	ENSMUSG00000026848.15	Tor1b	chr2	protein_coding	torsin family 1, member B
chr2	30845541	30845780	+	30844029	30845780	A5SS	0.33	50	50	ENSMUST00000135507.8	ENSMUSG00000026848.15	Tor1b	chr2	protein_coding	torsin family 1, member B
chr2	30845541	30845780	+	30844020	30845780	A5SS	0.33	50	50	ENSMUST00000156711.8	ENSMUSG00000026848.15	Tor1b	chr2	protein_coding	torsin family 1, member B
chr2	30886159	30890069	+	30886159;30888880	30888785;30890069	ES	0.5	50	50	ENSMUST00000102849.11	ENSMUSG00000026854.17	Usp20	chr2	protein_coding	ubiquitin specific peptidase 20
chr2	30888880	30892568	+	30888880;30890122	30890069;30892568	ES	0.5	50	50	ENSMUST00000102849.11	ENSMUSG00000026854.17	Usp20	chr2	protein_coding	ubiquitin specific peptidase 20
chr2	30896509	30897007	+	30896509	30897791	A3SS	0.5	50	50	ENSMUST00000102849.11	ENSMUSG00000026854.17	Usp20	chr2	protein_coding	ubiquitin specific peptidase 20
chr2	30872523	30886060	+	30872410	30886060	A5SS	0.25	50	50	ENSMUST00000102849.11	ENSMUSG00000026854.17	Usp20	chr2	protein_coding	ubiquitin specific peptidase 20
chr2	30873168	30886060	+	30872410	30886060	A5SS	0.25	50	50	ENSMUST00000102849.11	ENSMUSG00000026854.17	Usp20	chr2	protein_coding	ubiquitin specific peptidase 20
chr2	30885820	30886060	+	30872410	30886060	A5SS	0.25	50	50	ENSMUST00000102849.11	ENSMUSG00000026854.17	Usp20	chr2	protein_coding	ubiquitin specific peptidase 20
chr2	30872523;30873168	30873032;30886060	+	30872523	30886060	cassetteExon	0.5	100	100	ENSMUST00000138161.8	ENSMUSG00000026854.17	Usp20	chr2	protein_coding	ubiquitin specific peptidase 20
chr2	30885820	30886060	+	30872523	30886060	A5SS	0.25	50	50	ENSMUST00000138161.8	ENSMUSG00000026854.17	Usp20	chr2	protein_coding	ubiquitin specific peptidase 20
chr2	30888880	30892568	+	30888880	30890069	3pMXE	0.5	50	50	ENSMUST00000142232.2	ENSMUSG00000026854.17	Usp20	chr2	protein_coding	ubiquitin specific peptidase 20
chr2	30885820	30886060	+	30873168	30886060	A5SS	0.33	50	50	ENSMUST00000142232.2	ENSMUSG00000026854.17	Usp20	chr2	protein_coding	ubiquitin specific peptidase 20
chr2	30886159;30888880	30888785;30892568	+	30886159;30890122	30890069;30892568	MXE	0.5	100	100	ENSMUST00000154351.2	ENSMUSG00000026854.17	Usp20	chr2	protein_coding	ubiquitin specific peptidase 20
chr2	30930526;30934908	30934894;30944036	-	30930526	30944036	cassetteExon	0.5	100	100	ENSMUST00000073879.12	ENSMUSG00000075415.14	Fnbp1	chr2	protein_coding	formin binding protein 1
chr2	30930526;30943092	30942997;30944036	-	30930526	30944036	cassetteExon	0.5	100	100	ENSMUST00000073879.12	ENSMUSG00000075415.14	Fnbp1	chr2	protein_coding	formin binding protein 1
chr2	30930526;30943149	30942997;30944036	-	30930526	30944036	cassetteExon	0.5	100	100	ENSMUST00000073879.12	ENSMUSG00000075415.14	Fnbp1	chr2	protein_coding	formin binding protein 1
chr2	30930526;30943179	30942997;30944036	-	30930526	30944036	cassetteExon	0.5	100	100	ENSMUST00000073879.12	ENSMUSG00000075415.14	Fnbp1	chr2	protein_coding	formin binding protein 1
chr2	30926269	30926554	-	30926266	30926554	A3SS	0.5	50	50	ENSMUST00000073879.12	ENSMUSG00000075415.14	Fnbp1	chr2	protein_coding	formin binding protein 1
chr2	30986186	30986413	-	30986186	30987106	A5SS	0.5	50	50	ENSMUST00000073879.12	ENSMUSG00000075415.14	Fnbp1	chr2	protein_coding	formin binding protein 1
chr2	30995369	31006237	-	30995369	31031791	A5SS	0.5	50	50	ENSMUST00000073879.12	ENSMUSG00000075415.14	Fnbp1	chr2	protein_coding	formin binding protein 1
chr2	30930526;30934908	30934894;30942997	-	30930526	30942997	cassetteExon	0.5	100	100	ENSMUST00000113559.10	ENSMUSG00000075415.14	Fnbp1	chr2	protein_coding	formin binding protein 1
chr2	30930526;30934908	30934894;30944036	-	30930526;30943149	30942997;30944036	MXE	0.5	100	100	ENSMUST00000113559.10	ENSMUSG00000075415.14	Fnbp1	chr2	protein_coding	formin binding protein 1
chr2	30938300	30942997	-	30930526	30942997	A3SS	0.33	50	50	ENSMUST00000113559.10	ENSMUSG00000075415.14	Fnbp1	chr2	protein_coding	formin binding protein 1
chr2	30943092	30944036	-	30943149	30944036	A3SS	0.2	50	50	ENSMUST00000113559.10	ENSMUSG00000075415.14	Fnbp1	chr2	protein_coding	formin binding protein 1
chr2	30943179	30944036	-	30943149	30944036	A3SS	0.2	50	50	ENSMUST00000113559.10	ENSMUSG00000075415.14	Fnbp1	chr2	protein_coding	formin binding protein 1
chr2	30934908	30944036	-	30934908;30943179	30942997;30944036	ES	0.2	50	50	ENSMUST00000113560.8	ENSMUSG00000075415.14	Fnbp1	chr2	protein_coding	formin binding protein 1
chr2	30934908;30938300	30938217;30942997	-	30934908	30942997	cassetteExon	0.5	100	100	ENSMUST00000113560.8	ENSMUSG00000075415.14	Fnbp1	chr2	protein_coding	formin binding protein 1
chr2	30943092	30944036	-	30943179	30944036	A3SS	0.2	50	50	ENSMUST00000113560.8	ENSMUSG00000075415.14	Fnbp1	chr2	protein_coding	formin binding protein 1
chr2	30949029	30972986	-	30930526	30972986	A3SS	0.5	50	50	ENSMUST00000128500.8	ENSMUSG00000075415.14	Fnbp1	chr2	protein_coding	formin binding protein 1
chr2	30949029	30986039	-	30974097	30986039	A3SS&ES	0.5	50	50	ENSMUST00000128500.8	ENSMUSG00000075415.14	Fnbp1	chr2	protein_coding	formin binding protein 1
chr2	30930526	30934894	-	30930526	30972986	A5SS	0.25	50	50	ENSMUST00000128500.8	ENSMUSG00000075415.14	Fnbp1	chr2	protein_coding	formin binding protein 1
chr2	30930526	30942997	-	30930526	30972986	A5SS	0.25	50	50	ENSMUST00000128500.8	ENSMUSG00000075415.14	Fnbp1	chr2	protein_coding	formin binding protein 1
chr2	30930526	30944036	-	30930526	30972986	A5SS	0.25	50	50	ENSMUST00000128500.8	ENSMUSG00000075415.14	Fnbp1	chr2	protein_coding	formin binding protein 1
chr2	30930526;30934908	30934894;30944036	-	30930526;30943179	30942997;30944036	MXE	0.5	100	100	ENSMUST00000100208.9	ENSMUSG00000075415.14	Fnbp1	chr2	protein_coding	formin binding protein 1
chr2	30930526;30943092	30942997;30944036	-	30930526;30934908	30934894;30944036	MXE	0.5	100	100	ENSMUST00000100207.9	ENSMUSG00000075415.14	Fnbp1	chr2	protein_coding	formin binding protein 1
chr2	30934908;30943092	30942997;30944036	-	30934908	30944036	cassetteExon	0.5	100	100	ENSMUST00000100207.9	ENSMUSG00000075415.14	Fnbp1	chr2	protein_coding	formin binding protein 1
chr2	30934908;30943149	30942997;30944036	-	30934908	30944036	cassetteExon	0.5	100	100	ENSMUST00000100207.9	ENSMUSG00000075415.14	Fnbp1	chr2	protein_coding	formin binding protein 1
chr2	30934908	30938217	-	30934908	30944036	A5SS	0.33	50	50	ENSMUST00000100207.9	ENSMUSG00000075415.14	Fnbp1	chr2	protein_coding	formin binding protein 1
chr2	30949029	30972986	-	30949029	30986039	A5SS	0.5	50	50	ENSMUST00000136181.8	ENSMUSG00000075415.14	Fnbp1	chr2	protein_coding	formin binding protein 1
chr2	31041262	31041994	-	31041262	31042156	A5SS	0.5	50	50	ENSMUST00000148230.2	ENSMUSG00000087269.2	D330023K18Rik	chr2	lncRNA	RIKEN cDNA D330023K18 gene
chr2	31062425	31064214	+	31062093	31064214	A5SS	0.5	50	50	ENSMUST00000056433.7	ENSMUSG00000000194.14	Gpr107	chr2	protein_coding	G protein-coupled receptor 107
chr2	31075780	31078695	+	31075618	31078695	A5SS	0.5	50	50	ENSMUST00000056433.7	ENSMUSG00000000194.14	Gpr107	chr2	protein_coding	G protein-coupled receptor 107
chr2	31087088	31097691	+	31081902	31097691	A5SS	0.5	50	50	ENSMUST00000056433.7	ENSMUSG00000000194.14	Gpr107	chr2	protein_coding	G protein-coupled receptor 107
chr2	31136254	31170678	+	31136254;31160648	31160624;31170678	ES	0.5	50	50	ENSMUST00000000199.8	ENSMUSG00000062661.7	Ncs1	chr2	protein_coding	neuronal calcium sensor 1
chr2	31174751	31182296	+	31174751;31177415	31177299;31182296	ES	0.5	50	50	ENSMUST00000000199.8	ENSMUSG00000062661.7	Ncs1	chr2	protein_coding	neuronal calcium sensor 1
chr2	31292537	31294726	+	31292537;31293751	31293665;31294726	ES	0.5	50	50	ENSMUST00000113532.9	ENSMUSG00000055632.19	Hmcn2	chr2	protein_coding	hemicentin 2
chr2	31295671	31295790	+	31295671	31295793	A3SS	0.5	50	50	ENSMUST00000113532.9	ENSMUSG00000055632.19	Hmcn2	chr2	protein_coding	hemicentin 2
chr2	31273792	31274059	+	31273826	31274059	A5SS	0.5	50	50	ENSMUST00000113532.9	ENSMUSG00000055632.19	Hmcn2	chr2	protein_coding	hemicentin 2
chr2	31336887	31340820	+	31335355	31340820	A5SS	0.5	50	50	ENSMUST00000113532.9	ENSMUSG00000055632.19	Hmcn2	chr2	protein_coding	hemicentin 2
chr2	31502570	31503043	+	31502570;31502920	31502849;31503043	ES	0.5	50	50	ENSMUST00000113482.8	ENSMUSG00000026843.16	Fubp3	chr2	protein_coding	far upstream element (FUSE) binding protein 3
chr2	31503119	31505510	+	31503119;31504794	31504723;31505510	ES	0.5	50	50	ENSMUST00000113482.8	ENSMUSG00000026843.16	Fubp3	chr2	protein_coding	far upstream element (FUSE) binding protein 3
chr2	31501751;31502247	31502115;31502497	+	31501751	31502497	cassetteExon	0.5	100	100	ENSMUST00000113482.8	ENSMUSG00000026843.16	Fubp3	chr2	protein_coding	far upstream element (FUSE) binding protein 3
chr2	31473272	31482478	+	31473272	31482475	A3SS	0.5	50	50	ENSMUST00000113482.8	ENSMUSG00000026843.16	Fubp3	chr2	protein_coding	far upstream element (FUSE) binding protein 3
chr2	31482508	31484860	+	31482508	31484855	A3SS	0.33	50	50	ENSMUST00000113482.8	ENSMUSG00000026843.16	Fubp3	chr2	protein_coding	far upstream element (FUSE) binding protein 3
chr2	31482508	31485272	+	31482508	31484855	A3SS&ES	0.33	50	50	ENSMUST00000113482.8	ENSMUSG00000026843.16	Fubp3	chr2	protein_coding	far upstream element (FUSE) binding protein 3
chr2	31482508	31484860	+	31482508	31485272	A3SS	0.33	50	50	ENSMUST00000194386.6	ENSMUSG00000026843.16	Fubp3	chr2	protein_coding	far upstream element (FUSE) binding protein 3
chr2	31503119	31505510	+	31504794	31505510	5pMXE	0.5	50	50	ENSMUST00000130578.3	ENSMUSG00000026843.16	Fubp3	chr2	protein_coding	far upstream element (FUSE) binding protein 3
chr2	31564572	31565851	+	31564572;31564796	31564707;31565851	ES	0.5	50	50	ENSMUST00000038474.14	ENSMUSG00000039356.16	Exosc2	chr2	protein_coding	exosome component 2
chr2	31565916	31566677	+	31565916	31566680	A3SS	0.5	50	50	ENSMUST00000038474.14	ENSMUSG00000039356.16	Exosc2	chr2	protein_coding	exosome component 2
chr2	31566748	31568510	+	31566748	31568463	A3SS	0.5	50	50	ENSMUST00000038474.14	ENSMUSG00000039356.16	Exosc2	chr2	protein_coding	exosome component 2
chr2	31562598	31564527	+	31562585	31564527	A5SS	0.33	50	50	ENSMUST00000038474.14	ENSMUSG00000039356.16	Exosc2	chr2	protein_coding	exosome component 2
chr2	31563526	31564527	+	31562585	31564527	A5SS	0.33	50	50	ENSMUST00000038474.14	ENSMUSG00000039356.16	Exosc2	chr2	protein_coding	exosome component 2
chr2	31563526	31564527	+	31562598	31564527	A5SS	0.33	50	50	ENSMUST00000125883.8	ENSMUSG00000039356.16	Exosc2	chr2	protein_coding	exosome component 2
chr2	31579954	31668346	+	31579954	31585761	3pMXE	0.25	50	50	ENSMUST00000146537.2	ENSMUSG00000026842.17	Abl1	chr2	protein_coding	c-abl oncogene 1, non-receptor tyrosine kinase
chr2	31579954	31668349	+	31579954	31585761	3pMXE	0.25	50	50	ENSMUST00000146537.2	ENSMUSG00000026842.17	Abl1	chr2	protein_coding	c-abl oncogene 1, non-receptor tyrosine kinase
chr2	31579954	31580567	+	31579954	31585761	A3SS	0.25	50	50	ENSMUST00000146537.2	ENSMUSG00000026842.17	Abl1	chr2	protein_coding	c-abl oncogene 1, non-receptor tyrosine kinase
chr2	31585904	31668346	+	31585904	31596628	3pMXE	0.5	50	50	ENSMUST00000156736.4	ENSMUSG00000026842.17	Abl1	chr2	protein_coding	c-abl oncogene 1, non-receptor tyrosine kinase
chr2	31579954;31580771	31580567;31668346	+	31579954	31668346	cassetteExon	0.5	100	100	ENSMUST00000075759.13	ENSMUSG00000026842.17	Abl1	chr2	protein_coding	c-abl oncogene 1, non-receptor tyrosine kinase
chr2	31579954;31585904	31585761;31668346	+	31579954	31668346	cassetteExon	0.5	100	100	ENSMUST00000075759.13	ENSMUSG00000026842.17	Abl1	chr2	protein_coding	c-abl oncogene 1, non-receptor tyrosine kinase
chr2	31579954	31668349	+	31579954	31668346	A3SS	0.25	50	50	ENSMUST00000075759.13	ENSMUSG00000026842.17	Abl1	chr2	protein_coding	c-abl oncogene 1, non-receptor tyrosine kinase
chr2	31650127	31668346	+	31579954	31668346	A5SS	0.2	50	50	ENSMUST00000075759.13	ENSMUSG00000026842.17	Abl1	chr2	protein_coding	c-abl oncogene 1, non-receptor tyrosine kinase
chr2	31650467	31668346	+	31579954	31668346	A5SS	0.2	50	50	ENSMUST00000075759.13	ENSMUSG00000026842.17	Abl1	chr2	protein_coding	c-abl oncogene 1, non-receptor tyrosine kinase
chr2	31579954;31580771	31580567;31668346	+	31579954;31585904	31585761;31668346	MXE	0.5	100	100	ENSMUST00000142554.8	ENSMUSG00000026842.17	Abl1	chr2	protein_coding	c-abl oncogene 1, non-receptor tyrosine kinase
chr2	31650127	31668346	+	31585904	31668346	A5SS	0.2	50	50	ENSMUST00000142554.8	ENSMUSG00000026842.17	Abl1	chr2	protein_coding	c-abl oncogene 1, non-receptor tyrosine kinase
chr2	31650467	31668346	+	31585904	31668346	A5SS	0.2	50	50	ENSMUST00000142554.8	ENSMUSG00000026842.17	Abl1	chr2	protein_coding	c-abl oncogene 1, non-receptor tyrosine kinase
chr2	31579954	31580567	+	31579954	31668349	A3SS	0.25	50	50	ENSMUST00000123471.2	ENSMUSG00000026842.17	Abl1	chr2	protein_coding	c-abl oncogene 1, non-receptor tyrosine kinase
chr2	31650127	31668346	+	31580771	31668346	A5SS	0.2	50	50	ENSMUST00000135233.3	ENSMUSG00000026842.17	Abl1	chr2	protein_coding	c-abl oncogene 1, non-receptor tyrosine kinase
chr2	31650467	31668346	+	31580771	31668346	A5SS	0.2	50	50	ENSMUST00000135233.3	ENSMUSG00000026842.17	Abl1	chr2	protein_coding	c-abl oncogene 1, non-receptor tyrosine kinase
chr2	31650467	31668346	+	31650127	31668346	A5SS	0.2	50	50	ENSMUST00000028190.13	ENSMUSG00000026842.17	Abl1	chr2	protein_coding	c-abl oncogene 1, non-receptor tyrosine kinase
chr2	31815755	31815993	+	31815755	31815960	A3SS	0.5	50	50	ENSMUST00000138325.8	ENSMUSG00000026840.15	Lamc3	chr2	protein_coding	laminin gamma 3
chr2	31815202	31815550	+	31814721	31815550	A5SS	0.5	50	50	ENSMUST00000138325.8	ENSMUSG00000026840.15	Lamc3	chr2	protein_coding	laminin gamma 3
chr2	31840602	31855083	+	31840602;31852293	31852227;31855083	ES	0.33	50	50	ENSMUST00000001920.13	ENSMUSG00000001864.14	Aif1l	chr2	protein_coding	allograft inflammatory factor 1-like
chr2	31852293	31859642	+	31852293;31855124	31855083;31859642	ES	0.33	50	50	ENSMUST00000001920.13	ENSMUSG00000001864.14	Aif1l	chr2	protein_coding	allograft inflammatory factor 1-like
chr2	31850484	31852227	+	31840602	31852227	A5SS	0.33	50	50	ENSMUST00000001920.13	ENSMUSG00000001864.14	Aif1l	chr2	protein_coding	allograft inflammatory factor 1-like
chr2	31851374	31852227	+	31840602	31852227	A5SS	0.33	50	50	ENSMUST00000001920.13	ENSMUSG00000001864.14	Aif1l	chr2	protein_coding	allograft inflammatory factor 1-like
chr2	31853364	31855083	+	31852293	31855083	A5SS	0.33	50	50	ENSMUST00000001920.13	ENSMUSG00000001864.14	Aif1l	chr2	protein_coding	allograft inflammatory factor 1-like
chr2	31840602;31852293	31852227;31859642	+	31840602	31859642	cassetteExon	0.5	100	100	ENSMUST00000151276.3	ENSMUSG00000001864.14	Aif1l	chr2	protein_coding	allograft inflammatory factor 1-like
chr2	31840602;31855124	31855083;31859642	+	31840602	31859642	cassetteExon	0.5	100	100	ENSMUST00000151276.3	ENSMUSG00000001864.14	Aif1l	chr2	protein_coding	allograft inflammatory factor 1-like
chr2	31840602;31855124	31855083;31859642	+	31840602;31852293	31852227;31859642	MXE	0.5	100	100	ENSMUST00000148056.4	ENSMUSG00000001864.14	Aif1l	chr2	protein_coding	allograft inflammatory factor 1-like
chr2	31853364	31855083	+	31840602	31855083	A5SS	0.33	50	50	ENSMUST00000140649.8	ENSMUSG00000001864.14	Aif1l	chr2	protein_coding	allograft inflammatory factor 1-like
chr2	31851374	31852227	+	31850484	31852227	A5SS	0.33	50	50	ENSMUST00000128271.8	ENSMUSG00000001864.14	Aif1l	chr2	protein_coding	allograft inflammatory factor 1-like
chr2	31840602	31855083	+	31852293	31855083	5pMXE	0.33	50	50	ENSMUST00000156743.8	ENSMUSG00000001864.14	Aif1l	chr2	protein_coding	allograft inflammatory factor 1-like
chr2	31879151	31881276	+	31879151;31880373	31880247;31881276	ES	0.5	50	50	ENSMUST00000065398.13	ENSMUSG00000001855.16	Nup214	chr2	protein_coding	nucleoporin 214
chr2	31892690	31894325	+	31892690;31893042	31892893;31894325	ES	0.5	50	50	ENSMUST00000065398.13	ENSMUSG00000001855.16	Nup214	chr2	protein_coding	nucleoporin 214
chr2	31932581	31941021	+	31932581;31937586	31937415;31941021	ES	0.5	50	50	ENSMUST00000065398.13	ENSMUSG00000001855.16	Nup214	chr2	protein_coding	nucleoporin 214
chr2	31888062	31888215	+	31888062	31892604	A3SS	0.5	50	50	ENSMUST00000065398.13	ENSMUSG00000001855.16	Nup214	chr2	protein_coding	nucleoporin 214
chr2	31928184	31929332	+	31928184	31929335	A3SS	0.5	50	50	ENSMUST00000065398.13	ENSMUSG00000001855.16	Nup214	chr2	protein_coding	nucleoporin 214
chr2	31973620	31974839	-	31973620	31974218	5pMXE	0.5	50	50	ENSMUST00000139629.2	ENSMUSG00000050592.9	Fam78a	chr2	protein_coding	family with sequence similarity 78, member A
chr2	31942227	31954010	-	31942227	31959239	A5SS	0.33	50	50	ENSMUST00000139629.2	ENSMUSG00000050592.9	Fam78a	chr2	protein_coding	family with sequence similarity 78, member A
chr2	31942227	31954705	-	31942227	31959239	A5SS	0.33	50	50	ENSMUST00000139629.2	ENSMUSG00000050592.9	Fam78a	chr2	protein_coding	family with sequence similarity 78, member A
chr2	31959785	31969194	-	31959785	31972596	A5SS	0.5	50	50	ENSMUST00000139629.2	ENSMUSG00000050592.9	Fam78a	chr2	protein_coding	family with sequence similarity 78, member A
chr2	31942227	31954705	-	31942227	31954010	5pMXE	0.33	50	50	ENSMUST00000149300.8	ENSMUSG00000090157.8	Gm16534	chr2	lncRNA	predicted gene 16534
chr2	31986274;31998613	31998483;31999621	+	31986274	31999621	cassetteExon	0.5	100	100	ENSMUST00000057423.6	ENSMUSG00000051373.6	Plpp7	chr2	protein_coding	phospholipid phosphatase 7 (inactive)
chr2	31985692	31999621	+	31986274	31999621	A5SS	0.33	50	50	ENSMUST00000057423.6	ENSMUSG00000051373.6	Plpp7	chr2	protein_coding	phospholipid phosphatase 7 (inactive)
chr2	31998613	31999621	+	31985692	31999621	A5SS	0.33	50	50	ENSMUST00000140762.2	ENSMUSG00000051373.6	Plpp7	chr2	protein_coding	phospholipid phosphatase 7 (inactive)
chr2	32098847	32106058	+	32098847;32102303	32102087;32106058	ES	0.33	50	50	ENSMUST00000036691.14	ENSMUSG00000039262.17	Prrc2b	chr2	protein_coding	proline-rich coiled-coil 2B
chr2	32117048;32119356	32119275;32120623	+	32117048	32120623	cassetteExon	0.5	100	100	ENSMUST00000036691.14	ENSMUSG00000039262.17	Prrc2b	chr2	protein_coding	proline-rich coiled-coil 2B
chr2	32102303	32102899	+	32102303	32106058	A3SS	0.5	50	50	ENSMUST00000036691.14	ENSMUSG00000039262.17	Prrc2b	chr2	protein_coding	proline-rich coiled-coil 2B
chr2	32108771	32109229	+	32108771	32109226	A3SS	0.5	50	50	ENSMUST00000036691.14	ENSMUSG00000039262.17	Prrc2b	chr2	protein_coding	proline-rich coiled-coil 2B
chr2	32110188	32111096	+	32110188	32111092	A3SS	0.5	50	50	ENSMUST00000036691.14	ENSMUSG00000039262.17	Prrc2b	chr2	protein_coding	proline-rich coiled-coil 2B
chr2	32104959	32106058	+	32102303	32106058	A5SS	0.33	50	50	ENSMUST00000036691.14	ENSMUSG00000039262.17	Prrc2b	chr2	protein_coding	proline-rich coiled-coil 2B
chr2	32106155	32106624	+	32106245	32106624	A5SS	0.5	50	50	ENSMUST00000036691.14	ENSMUSG00000039262.17	Prrc2b	chr2	protein_coding	proline-rich coiled-coil 2B
chr2	32109879	32110102	+	32109749	32110102	A5SS	0.5	50	50	ENSMUST00000036691.14	ENSMUSG00000039262.17	Prrc2b	chr2	protein_coding	proline-rich coiled-coil 2B
chr2	32102303	32106058	+	32102303;32104959	32102899;32106058	ES	0.33	50	50	ENSMUST00000069817.15	ENSMUSG00000039262.17	Prrc2b	chr2	protein_coding	proline-rich coiled-coil 2B
chr2	32104959	32106058	+	32098847	32106058	A5SS	0.33	50	50	ENSMUST00000123270.8	ENSMUSG00000039262.17	Prrc2b	chr2	protein_coding	proline-rich coiled-coil 2B
chr2	32098847	32106058	+	32102303	32106058	5pMXE	0.33	50	50	ENSMUST00000156313.8	ENSMUSG00000039262.17	Prrc2b	chr2	protein_coding	proline-rich coiled-coil 2B
chr2	32134401;32134962	32134798;32135559	+	32134401	32135559	cassetteExon	0.5	100	100	ENSMUST00000036473.16	ENSMUSG00000039254.17	Pomt1	chr2	protein_coding	protein-O-mannosyltransferase 1
chr2	32138723	32140451	+	32138723	32140482	A3SS	0.5	50	50	ENSMUST00000036473.16	ENSMUSG00000039254.17	Pomt1	chr2	protein_coding	protein-O-mannosyltransferase 1
chr2	32127214	32127372	+	32126753	32127372	A5SS	0.5	50	50	ENSMUST00000036473.16	ENSMUSG00000039254.17	Pomt1	chr2	protein_coding	protein-O-mannosyltransferase 1
chr2	32171822	32177609	-	32171822	32172701	5pMXE	0.5	50	50	ENSMUST00000113395.8	ENSMUSG00000044627.12	Swi5	chr2	protein_coding	SWI5 recombination repair homolog (yeast)
chr2	32169143;32170522	32170239;32170721	-	32169143	32170721	cassetteExon	0.5	100	100	ENSMUST00000113395.8	ENSMUSG00000044627.12	Swi5	chr2	protein_coding	SWI5 recombination repair homolog (yeast)
chr2	32170815	32177609	-	32170815;32171822	32171698;32177609	ES	0.5	50	50	ENSMUST00000140406.8	ENSMUSG00000044627.12	Swi5	chr2	protein_coding	SWI5 recombination repair homolog (yeast)
chr2	32177657	32178043	-	32177657	32177898	5pMXE	0.5	50	50	ENSMUST00000140406.8	ENSMUSG00000044627.12	Swi5	chr2	protein_coding	SWI5 recombination repair homolog (yeast)
chr2	32182227	32186638	+	32182227;32183407	32183327;32186638	ES	0.5	50	50	ENSMUST00000139494.8	ENSMUSG00000002546.18	Golga2	chr2	protein_coding	golgi autoantigen, golgin subfamily a, 2
chr2	32187589	32188612	+	32187589	32187766	3pMXE	0.5	50	50	ENSMUST00000139494.8	ENSMUSG00000002546.18	Golga2	chr2	protein_coding	golgi autoantigen, golgin subfamily a, 2
chr2	32178408	32182105	+	32178206	32182105	A5SS	0.5	50	50	ENSMUST00000139494.8	ENSMUSG00000002546.18	Golga2	chr2	protein_coding	golgi autoantigen, golgin subfamily a, 2
chr2	32182227	32186977	+	32182227;32186733	32186638;32186977	ES	0.5	50	50	ENSMUST00000239447.2	ENSMUSG00000002546.18	Golga2	chr2	protein_coding	golgi autoantigen, golgin subfamily a, 2
chr2	32187589	32188612	+	32187589;32187846	32187766;32188612	ES	0.5	50	50	ENSMUST00000239447.2	ENSMUSG00000002546.18	Golga2	chr2	protein_coding	golgi autoantigen, golgin subfamily a, 2
chr2	32182227	32183327	+	32182227	32186977	A3SS	0.33	50	50	ENSMUST00000127276.2	ENSMUSG00000002546.18	Golga2	chr2	protein_coding	golgi autoantigen, golgin subfamily a, 2
chr2	32210629	32213434	-	32210629;32213202	32213191;32213434	ES	0.5	50	50	ENSMUST00000113352.9	ENSMUSG00000026825.18	Dnm1	chr2	protein_coding	dynamin 1
chr2	32218059;32223216	32223078;32225788	-	32218059;32224832	32224694;32225788	MXE	0.5	100	100	ENSMUST00000113352.9	ENSMUSG00000026825.18	Dnm1	chr2	protein_coding	dynamin 1
chr2	32218059;32223216	32223165;32225788	-	32218059;32224832	32224694;32225788	MXE	0.5	100	100	ENSMUST00000113352.9	ENSMUSG00000026825.18	Dnm1	chr2	protein_coding	dynamin 1
chr2	32230918;32234102	32234020;32243061	-	32230918	32243061	cassetteExon	0.5	100	100	ENSMUST00000113352.9	ENSMUSG00000026825.18	Dnm1	chr2	protein_coding	dynamin 1
chr2	32199076	32202139	-	32200499	32202139	A3SS	0.25	50	50	ENSMUST00000113352.9	ENSMUSG00000026825.18	Dnm1	chr2	protein_coding	dynamin 1
chr2	32199649	32202139	-	32200499	32202139	A3SS	0.25	50	50	ENSMUST00000113352.9	ENSMUSG00000026825.18	Dnm1	chr2	protein_coding	dynamin 1
chr2	32200039	32202139	-	32200499	32202139	A3SS	0.25	50	50	ENSMUST00000113352.9	ENSMUSG00000026825.18	Dnm1	chr2	protein_coding	dynamin 1
chr2	32202354	32202722	-	32202354	32202696	A5SS	0.5	50	50	ENSMUST00000113352.9	ENSMUSG00000026825.18	Dnm1	chr2	protein_coding	dynamin 1
chr2	32207019	32207297	-	32207019	32210516	A5SS	0.5	50	50	ENSMUST00000113352.9	ENSMUSG00000026825.18	Dnm1	chr2	protein_coding	dynamin 1
chr2	32199076	32202139	-	32199076;32200039	32199905;32202139	ES	0.25	50	50	ENSMUST00000139624.8	ENSMUSG00000026825.18	Dnm1	chr2	protein_coding	dynamin 1
chr2	32199076;32200499	32200463;32202139	-	32199076;32200039	32199905;32202139	MXE	0.5	100	100	ENSMUST00000139624.8	ENSMUSG00000026825.18	Dnm1	chr2	protein_coding	dynamin 1
chr2	32200039;32200499	32200463;32202139	-	32200039	32202139	cassetteExon	0.5	100	100	ENSMUST00000139624.8	ENSMUSG00000026825.18	Dnm1	chr2	protein_coding	dynamin 1
chr2	32199649	32202139	-	32200039	32202139	A3SS&ES	0.25	50	50	ENSMUST00000139624.8	ENSMUSG00000026825.18	Dnm1	chr2	protein_coding	dynamin 1
chr2	32199649;32200499	32200463;32202139	-	32199649	32202139	cassetteExon	0.5	100	100	ENSMUST00000091089.12	ENSMUSG00000026825.18	Dnm1	chr2	protein_coding	dynamin 1
chr2	32199076	32202139	-	32199649	32202139	A3SS	0.25	50	50	ENSMUST00000091089.12	ENSMUSG00000026825.18	Dnm1	chr2	protein_coding	dynamin 1
chr2	32199076	32202139	-	32199076;32200499	32200463;32202139	ES	0.25	50	50	ENSMUST00000078352.12	ENSMUSG00000026825.18	Dnm1	chr2	protein_coding	dynamin 1
chr2	32199076;32200039	32199905;32200463	-	32199076	32200463	cassetteExon	0.5	100	100	ENSMUST00000078352.12	ENSMUSG00000026825.18	Dnm1	chr2	protein_coding	dynamin 1
chr2	32199646	32200463	-	32199076	32200463	A3SS	0.25	50	50	ENSMUST00000078352.12	ENSMUSG00000026825.18	Dnm1	chr2	protein_coding	dynamin 1
chr2	32199649	32200463	-	32199076	32200463	A3SS	0.25	50	50	ENSMUST00000078352.12	ENSMUSG00000026825.18	Dnm1	chr2	protein_coding	dynamin 1
chr2	32218059	32223165	-	32218059	32223078	A5SS	0.33	50	50	ENSMUST00000078352.12	ENSMUSG00000026825.18	Dnm1	chr2	protein_coding	dynamin 1
chr2	32199649	32202139	-	32199649	32200463	5pMXE	0.5	50	50	ENSMUST00000145885.2	ENSMUSG00000026825.18	Dnm1	chr2	protein_coding	dynamin 1
chr2	32199646	32200463	-	32199649	32200463	A3SS	0.25	50	50	ENSMUST00000145885.2	ENSMUSG00000026825.18	Dnm1	chr2	protein_coding	dynamin 1
chr2	32200039	32200463	-	32199649	32200463	A3SS	0.25	50	50	ENSMUST00000145885.2	ENSMUSG00000026825.18	Dnm1	chr2	protein_coding	dynamin 1
chr2	32200039	32200463	-	32199646	32200463	A3SS	0.25	50	50	ENSMUST00000202578.4	ENSMUSG00000026825.18	Dnm1	chr2	protein_coding	dynamin 1
chr2	32199076	32200463	-	32200039	32200463	3pMXE	0.25	50	50	ENSMUST00000139291.3	ENSMUSG00000026825.18	Dnm1	chr2	protein_coding	dynamin 1
chr2	32253991	32255815	+	32253991;32254346	32254231;32255815	ES	0.5	50	50	ENSMUST00000113334.8	ENSMUSG00000039205.17	Ciz1	chr2	protein_coding	CDKN1A interacting zinc finger protein 1
chr2	32254346	32257315	+	32254346;32255886	32255815;32257315	ES	0.33	50	50	ENSMUST00000113334.8	ENSMUSG00000039205.17	Ciz1	chr2	protein_coding	CDKN1A interacting zinc finger protein 1
chr2	32257544	32260059	+	32257544	32260044	A3SS	0.5	50	50	ENSMUST00000113334.8	ENSMUSG00000039205.17	Ciz1	chr2	protein_coding	CDKN1A interacting zinc finger protein 1
chr2	32253170	32253817	+	32242539	32253817	A5SS	0.25	50	50	ENSMUST00000113334.8	ENSMUSG00000039205.17	Ciz1	chr2	protein_coding	CDKN1A interacting zinc finger protein 1
chr2	32253310	32253817	+	32242539	32253817	A5SS	0.25	50	50	ENSMUST00000113334.8	ENSMUSG00000039205.17	Ciz1	chr2	protein_coding	CDKN1A interacting zinc finger protein 1
chr2	32253668	32253817	+	32242539	32253817	A5SS	0.25	50	50	ENSMUST00000113334.8	ENSMUSG00000039205.17	Ciz1	chr2	protein_coding	CDKN1A interacting zinc finger protein 1
chr2	32261125	32261648	+	32261420	32261648	A5SS	0.5	50	50	ENSMUST00000113334.8	ENSMUSG00000039205.17	Ciz1	chr2	protein_coding	CDKN1A interacting zinc finger protein 1
chr2	32253170;32253668	32253635;32253817	+	32253170	32253817	cassetteExon	0.5	100	100	ENSMUST00000125769.8	ENSMUSG00000039205.17	Ciz1	chr2	protein_coding	CDKN1A interacting zinc finger protein 1
chr2	32253991;32254346	32254231;32257315	+	32253991	32257315	cassetteExon	0.5	100	100	ENSMUST00000125769.8	ENSMUSG00000039205.17	Ciz1	chr2	protein_coding	CDKN1A interacting zinc finger protein 1
chr2	32253991;32255886	32255815;32257315	+	32253991	32257315	cassetteExon	0.5	100	100	ENSMUST00000125769.8	ENSMUSG00000039205.17	Ciz1	chr2	protein_coding	CDKN1A interacting zinc finger protein 1
chr2	32253310	32253817	+	32253170	32253817	A5SS	0.25	50	50	ENSMUST00000125769.8	ENSMUSG00000039205.17	Ciz1	chr2	protein_coding	CDKN1A interacting zinc finger protein 1
chr2	32253310	32253817	+	32253668	32253817	A5SS&ES	0.33	50	50	ENSMUST00000136079.8	ENSMUSG00000039205.17	Ciz1	chr2	protein_coding	CDKN1A interacting zinc finger protein 1
chr2	32253170	32253817	+	32253668	32253817	5pMXE	0.25	50	50	ENSMUST00000113332.8	ENSMUSG00000039205.17	Ciz1	chr2	protein_coding	CDKN1A interacting zinc finger protein 1
chr2	32261125	32261261	+	32261113	32261261	A5SS	0.5	50	50	ENSMUST00000113332.8	ENSMUSG00000039205.17	Ciz1	chr2	protein_coding	CDKN1A interacting zinc finger protein 1
chr2	32261125	32261648	+	32261125;32261420	32261261;32261648	ES	0.5	50	50	ENSMUST00000192758.6	ENSMUSG00000039205.17	Ciz1	chr2	protein_coding	CDKN1A interacting zinc finger protein 1
chr2	32253991	32257315	+	32253991	32255815	3pMXE	0.33	50	50	ENSMUST00000136325.3	ENSMUSG00000039205.17	Ciz1	chr2	protein_coding	CDKN1A interacting zinc finger protein 1
chr2	32253991	32255815	+	32253991	32254231	3pMXE	0.33	50	50	ENSMUST00000147338.2	ENSMUSG00000039205.17	Ciz1	chr2	protein_coding	CDKN1A interacting zinc finger protein 1
chr2	32253991	32257315	+	32253991	32254231	3pMXE	0.33	50	50	ENSMUST00000147338.2	ENSMUSG00000039205.17	Ciz1	chr2	protein_coding	CDKN1A interacting zinc finger protein 1
chr2	32253991;32255886	32255815;32257315	+	32253991;32254346	32254231;32257315	MXE	0.5	100	100	ENSMUST00000113331.8	ENSMUSG00000039205.17	Ciz1	chr2	protein_coding	CDKN1A interacting zinc finger protein 1
chr2	32253991	32257315	+	32255886	32257315	5pMXE	0.33	50	50	ENSMUST00000192055.2	ENSMUSG00000039205.17	Ciz1	chr2	protein_coding	CDKN1A interacting zinc finger protein 1
chr2	32254346	32257315	+	32255886	32257315	5pMXE	0.33	50	50	ENSMUST00000192055.2	ENSMUSG00000039205.17	Ciz1	chr2	protein_coding	CDKN1A interacting zinc finger protein 1
chr2	32269545	32271704	-	32269545	32271694	A5SS	0.5	50	50	ENSMUST00000146423.2	ENSMUSG00000039195.5	1110008P14Rik	chr2	protein_coding	RIKEN cDNA 1110008P14 gene
chr2	32286562	32287708	+	32286562	32287550	A3SS	0.5	50	50	ENSMUST00000028162.5	ENSMUSG00000026820.6	Ptges2	chr2	protein_coding	prostaglandin E synthase 2
chr2	32290120	32290402	+	32290120	32290415	A3SS	0.5	50	50	ENSMUST00000028162.5	ENSMUSG00000026820.6	Ptges2	chr2	protein_coding	prostaglandin E synthase 2
chr2	32310428	32311315	-	32310428;32310703	32310668;32311315	ES	0.5	50	50	ENSMUST00000052119.14	ENSMUSG00000026819.16	Slc25a25	chr2	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
chr2	32311611	32341079	-	32311611	32320541	5pMXE	0.2	50	50	ENSMUST00000052119.14	ENSMUSG00000026819.16	Slc25a25	chr2	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
chr2	32311611	32311797	-	32311611	32320541	A5SS	0.2	50	50	ENSMUST00000052119.14	ENSMUSG00000026819.16	Slc25a25	chr2	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
chr2	32311611	32313806	-	32311611	32320541	A5SS	0.2	50	50	ENSMUST00000052119.14	ENSMUSG00000026819.16	Slc25a25	chr2	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
chr2	32311611	32321004	-	32311611	32320541	A5SS	0.2	50	50	ENSMUST00000052119.14	ENSMUSG00000026819.16	Slc25a25	chr2	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
chr2	32311611	32311797	-	32311611	32341079	A5SS	0.2	50	50	ENSMUST00000028160.15	ENSMUSG00000026819.16	Slc25a25	chr2	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
chr2	32311611	32313806	-	32311611	32341079	A5SS	0.2	50	50	ENSMUST00000028160.15	ENSMUSG00000026819.16	Slc25a25	chr2	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
chr2	32311611	32321004	-	32311611	32341079	A5SS	0.2	50	50	ENSMUST00000028160.15	ENSMUSG00000026819.16	Slc25a25	chr2	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
chr2	32311611	32321004	-	32311611	32313806	5pMXE	0.2	50	50	ENSMUST00000113307.9	ENSMUSG00000026819.16	Slc25a25	chr2	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
chr2	32311611	32311797	-	32311611	32313806	A5SS	0.2	50	50	ENSMUST00000113307.9	ENSMUSG00000026819.16	Slc25a25	chr2	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
chr2	32311611	32311797	-	32311611	32321004	A5SS	0.2	50	50	ENSMUST00000136361.8	ENSMUSG00000026819.16	Slc25a25	chr2	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
chr2	32430326	32448039	+	32426244	32448039	A5SS	0.5	50	50	ENSMUST00000136816.8	ENSMUSG00000039157.13	Fam102a	chr2	protein_coding	family with sequence similarity 102, member A
chr2	32425876	32426082	+	32425641	32426082	A5SS	0.5	50	50	ENSMUST00000133512.2	ENSMUSG00000039157.13	Fam102a	chr2	protein_coding	family with sequence similarity 102, member A
chr2	32470441;32471184	32470958;32473285	+	32470441	32473285	cassetteExon	0.5	100	100	ENSMUST00000055304.14	ENSMUSG00000046854.17	Pip5kl1	chr2	protein_coding	phosphatidylinositol-4-phosphate 5-kinase-like 1
chr2	32466032	32466663	+	32465906	32466663	A5SS	0.5	50	50	ENSMUST00000055304.14	ENSMUSG00000046854.17	Pip5kl1	chr2	protein_coding	phosphatidylinositol-4-phosphate 5-kinase-like 1
chr2	32484414;32485562	32485507;32485706	+	32484414	32485706	cassetteExon	0.5	100	100	ENSMUST00000102818.11	ENSMUSG00000079442.13	St6galnac4	chr2	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4
chr2	32489848;32499328	32499238;32502236	+	32489848	32502236	cassetteExon	0.5	100	100	ENSMUST00000131229.8	ENSMUSG00000026811.19	St6galnac6	chr2	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
chr2	32489848;32499328	32499238;32504793	+	32489848;32502415	32502236;32504793	MXE	0.5	100	100	ENSMUST00000131229.8	ENSMUSG00000026811.19	St6galnac6	chr2	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
chr2	32497123	32502236	+	32489848	32502236	A5SS	0.33	50	50	ENSMUST00000131229.8	ENSMUSG00000026811.19	St6galnac6	chr2	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
chr2	32505180	32508509	+	32505199	32508509	A5SS	0.5	50	50	ENSMUST00000131229.8	ENSMUSG00000026811.19	St6galnac6	chr2	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
chr2	32499328	32504793	+	32499328;32502415	32502236;32504793	ES	0.5	50	50	ENSMUST00000140983.8	ENSMUSG00000026811.19	St6galnac6	chr2	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
chr2	32497123	32499238	+	32489848	32499238	A5SS	0.16	50	50	ENSMUST00000140983.8	ENSMUSG00000026811.19	St6galnac6	chr2	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
chr2	32497123	32502236	+	32499328	32502236	A5SS&ES	0.33	50	50	ENSMUST00000140983.8	ENSMUSG00000026811.19	St6galnac6	chr2	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
chr2	32498108	32499238	+	32489848	32499238	A5SS	0.16	50	50	ENSMUST00000140983.8	ENSMUSG00000026811.19	St6galnac6	chr2	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
chr2	32498237	32499238	+	32489848	32499238	A5SS	0.16	50	50	ENSMUST00000140983.8	ENSMUSG00000026811.19	St6galnac6	chr2	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
chr2	32498569	32499238	+	32489848	32499238	A5SS	0.16	50	50	ENSMUST00000140983.8	ENSMUSG00000026811.19	St6galnac6	chr2	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
chr2	32498888	32499238	+	32489848	32499238	A5SS	0.16	50	50	ENSMUST00000140983.8	ENSMUSG00000026811.19	St6galnac6	chr2	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
chr2	32497123	32502236	+	32497123;32499328	32499238;32502236	ES	0.5	50	50	ENSMUST00000113290.8	ENSMUSG00000026811.19	St6galnac6	chr2	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
chr2	32497123;32498108	32498054;32499238	+	32497123	32499238	cassetteExon	0.5	100	100	ENSMUST00000113290.8	ENSMUSG00000026811.19	St6galnac6	chr2	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
chr2	32497123;32498237	32498054;32499238	+	32497123	32499238	cassetteExon	0.5	100	100	ENSMUST00000113290.8	ENSMUSG00000026811.19	St6galnac6	chr2	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
chr2	32498569	32499238	+	32497123	32499238	A5SS	0.16	50	50	ENSMUST00000113290.8	ENSMUSG00000026811.19	St6galnac6	chr2	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
chr2	32498888	32499238	+	32497123	32499238	A5SS	0.16	50	50	ENSMUST00000113290.8	ENSMUSG00000026811.19	St6galnac6	chr2	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
chr2	32498108	32499238	+	32498237	32499238	A5SS	0.2	50	50	ENSMUST00000095045.9	ENSMUSG00000026811.19	St6galnac6	chr2	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
chr2	32498569	32499238	+	32498237	32499238	A5SS	0.2	50	50	ENSMUST00000095045.9	ENSMUSG00000026811.19	St6galnac6	chr2	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
chr2	32498888	32499238	+	32498237	32499238	A5SS	0.2	50	50	ENSMUST00000095045.9	ENSMUSG00000026811.19	St6galnac6	chr2	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
chr2	32498569	32499238	+	32498108	32499238	A5SS	0.2	50	50	ENSMUST00000095044.10	ENSMUSG00000026811.19	St6galnac6	chr2	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
chr2	32498888	32499238	+	32498108	32499238	A5SS	0.2	50	50	ENSMUST00000095044.10	ENSMUSG00000026811.19	St6galnac6	chr2	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
chr2	32497123;32499328	32499238;32504793	+	32497123;32502415	32502236;32504793	MXE	0.5	100	100	ENSMUST00000126636.8	ENSMUSG00000026811.19	St6galnac6	chr2	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
chr2	32497123	32498054	+	32497123	32502236	A3SS	0.33	50	50	ENSMUST00000126636.8	ENSMUSG00000026811.19	St6galnac6	chr2	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
chr2	32497123	32499238	+	32498108	32499238	5pMXE	0.16	50	50	ENSMUST00000072111.8	ENSMUSG00000026811.19	St6galnac6	chr2	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
chr2	32498888	32499238	+	32498569	32499238	A5SS	0.16	50	50	ENSMUST00000081879.12	ENSMUSG00000026811.19	St6galnac6	chr2	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
chr2	32499328	32504793	+	32499328	32502236	3pMXE	0.5	50	50	ENSMUST00000129165.2	ENSMUSG00000026811.19	St6galnac6	chr2	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
chr2	32489848	32502236	+	32499328	32502236	5pMXE	0.33	50	50	ENSMUST00000128811.2	ENSMUSG00000026811.19	St6galnac6	chr2	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
chr2	32519896	32520262	+	32519896	32520247	A3SS	0.5	50	50	ENSMUST00000113278.9	ENSMUSG00000026817.15	Ak1	chr2	protein_coding	adenylate kinase 1
chr2	32515550	32518463	+	32511889	32518463	A5SS	0.5	50	50	ENSMUST00000113278.9	ENSMUSG00000026817.15	Ak1	chr2	protein_coding	adenylate kinase 1
chr2	32519628	32519861	+	32518500	32519861	A5SS	0.5	50	50	ENSMUST00000113278.9	ENSMUSG00000026817.15	Ak1	chr2	protein_coding	adenylate kinase 1
chr2	32537036	32540154	+	32537036	32547528	A3SS	0.33	50	50	ENSMUST00000113272.8	ENSMUSG00000026814.17	Eng	chr2	protein_coding	endoglin
chr2	32537036	32547531	+	32537036	32547528	A3SS	0.33	50	50	ENSMUST00000113272.8	ENSMUSG00000026814.17	Eng	chr2	protein_coding	endoglin
chr2	32567973	32568396	+	32567973	32568468	A3SS	0.5	50	50	ENSMUST00000113272.8	ENSMUSG00000026814.17	Eng	chr2	protein_coding	endoglin
chr2	32537036	32540154	+	32537036	32547531	A3SS	0.33	50	50	ENSMUST00000167841.8	ENSMUSG00000026814.17	Eng	chr2	protein_coding	endoglin
chr2	32577849	32581202	-	32577849;32578046	32577932;32581202	ES	0.5	50	50	ENSMUST00000028148.11	ENSMUSG00000009566.13	Fpgs	chr2	protein_coding	folylpolyglutamyl synthetase
chr2	32582733	32593837	-	32582733	32584001	5pMXE	0.5	50	50	ENSMUST00000028148.11	ENSMUSG00000009566.13	Fpgs	chr2	protein_coding	folylpolyglutamyl synthetase
chr2	32574828	32574920	-	32574828	32575326	A5SS	0.5	50	50	ENSMUST00000028148.11	ENSMUSG00000009566.13	Fpgs	chr2	protein_coding	folylpolyglutamyl synthetase
chr2	32600579	32602577	-	32600579;32602124	32602043;32602577	ES	0.5	50	50	ENSMUST00000009699.16	ENSMUSG00000009555.17	Cdk9	chr2	protein_coding	cyclin-dependent kinase 9 (CDC2-related kinase)
chr2	32600803	32602043	-	32600579	32602043	A3SS	0.5	50	50	ENSMUST00000009699.16	ENSMUSG00000009555.17	Cdk9	chr2	protein_coding	cyclin-dependent kinase 9 (CDC2-related kinase)
chr2	32602124	32602222	-	32602124	32602577	A5SS	0.5	50	50	ENSMUST00000009699.16	ENSMUSG00000009555.17	Cdk9	chr2	protein_coding	cyclin-dependent kinase 9 (CDC2-related kinase)
chr2	32600579	32602577	-	32602124	32602577	A3SS&ES	0.5	50	50	ENSMUST00000154131.2	ENSMUSG00000009555.17	Cdk9	chr2	protein_coding	cyclin-dependent kinase 9 (CDC2-related kinase)
chr2	32600579	32602577	-	32600579	32602043	5pMXE	0.5	50	50	ENSMUST00000155205.2	ENSMUSG00000009555.17	Cdk9	chr2	protein_coding	cyclin-dependent kinase 9 (CDC2-related kinase)
chr2	32627570;32631679	32631222;32634763	+	32627570	32634763	cassetteExon	0.5	100	100	ENSMUST00000074248.11	ENSMUSG00000059013.13	Sh2d3c	chr2	protein_coding	SH2 domain containing 3C
chr2	32617818	32627531	+	32615411	32627531	A5SS	0.25	50	50	ENSMUST00000074248.11	ENSMUSG00000059013.13	Sh2d3c	chr2	protein_coding	SH2 domain containing 3C
chr2	32622937	32627531	+	32615411	32627531	A5SS	0.25	50	50	ENSMUST00000074248.11	ENSMUSG00000059013.13	Sh2d3c	chr2	protein_coding	SH2 domain containing 3C
chr2	32625934	32627531	+	32615411	32627531	A5SS	0.25	50	50	ENSMUST00000074248.11	ENSMUSG00000059013.13	Sh2d3c	chr2	protein_coding	SH2 domain containing 3C
chr2	32617818	32627531	+	32617818;32622937	32622804;32627531	ES	0.33	50	50	ENSMUST00000124133.8	ENSMUSG00000059013.13	Sh2d3c	chr2	protein_coding	SH2 domain containing 3C
chr2	32625934	32627531	+	32622937	32627531	A5SS	0.33	50	50	ENSMUST00000124133.8	ENSMUSG00000059013.13	Sh2d3c	chr2	protein_coding	SH2 domain containing 3C
chr2	32625934	32627531	+	32617818	32627531	A5SS	0.25	50	50	ENSMUST00000113242.5	ENSMUSG00000059013.13	Sh2d3c	chr2	protein_coding	SH2 domain containing 3C
chr2	32627570	32634763	+	32627570	32631222	3pMXE	0.5	50	50	ENSMUST00000141670.2	ENSMUSG00000059013.13	Sh2d3c	chr2	protein_coding	SH2 domain containing 3C
chr2	32627570	32634763	+	32631679	32634763	5pMXE	0.5	50	50	ENSMUST00000131101.3	ENSMUSG00000059013.13	Sh2d3c	chr2	protein_coding	SH2 domain containing 3C
chr2	32631679	32633233	+	32631679	32634763	A3SS	0.5	50	50	ENSMUST00000131101.3	ENSMUSG00000059013.13	Sh2d3c	chr2	protein_coding	SH2 domain containing 3C
chr2	32664569	32665343	-	32664569;32665107	32665060;32665343	ES	0.5	50	50	ENSMUST00000091059.12	ENSMUSG00000039021.16	Ttc16	chr2	protein_coding	tetratricopeptide repeat domain 16
chr2	32653017	32654905	-	32647580	32654905	A3SS	0.5	50	50	ENSMUST00000091059.12	ENSMUSG00000039021.16	Ttc16	chr2	protein_coding	tetratricopeptide repeat domain 16
chr2	32664164	32664403	-	32664084	32664403	A3SS	0.5	50	50	ENSMUST00000091059.12	ENSMUSG00000039021.16	Ttc16	chr2	protein_coding	tetratricopeptide repeat domain 16
chr2	32664569	32664806	-	32664569	32665060	A5SS	0.25	50	50	ENSMUST00000091059.12	ENSMUSG00000039021.16	Ttc16	chr2	protein_coding	tetratricopeptide repeat domain 16
chr2	32664569	32665248	-	32664569	32665060	A5SS&ES	0.25	50	50	ENSMUST00000091059.12	ENSMUSG00000039021.16	Ttc16	chr2	protein_coding	tetratricopeptide repeat domain 16
chr2	32665107	32665248	-	32665107	32665343	A5SS	0.5	50	50	ENSMUST00000091059.12	ENSMUSG00000039021.16	Ttc16	chr2	protein_coding	tetratricopeptide repeat domain 16
chr2	32664569	32665248	-	32664569;32665107	32664806;32665248	ES	0.5	50	50	ENSMUST00000066478.9	ENSMUSG00000039021.16	Ttc16	chr2	protein_coding	tetratricopeptide repeat domain 16
chr2	32664569	32665343	-	32664569	32664806	A5SS&ES	0.25	50	50	ENSMUST00000066478.9	ENSMUSG00000039021.16	Ttc16	chr2	protein_coding	tetratricopeptide repeat domain 16
chr2	32664569;32665107	32665060;32665248	-	32664569	32665248	cassetteExon	0.5	100	100	ENSMUST00000161089.8	ENSMUSG00000039021.16	Ttc16	chr2	protein_coding	tetratricopeptide repeat domain 16
chr2	32664569	32665343	-	32664569	32665248	A5SS&ES	0.25	50	50	ENSMUST00000161089.8	ENSMUSG00000039021.16	Ttc16	chr2	protein_coding	tetratricopeptide repeat domain 16
chr2	32664569	32665343	-	32664569	32665060	A5SS&ES	0.25	50	50	ENSMUST00000161950.8	ENSMUSG00000039021.16	Ttc16	chr2	protein_coding	tetratricopeptide repeat domain 16
chr2	32664569;32665107	32664806;32665343	-	32664569	32665343	cassetteExon	0.5	100	100	ENSMUST00000125891.2	ENSMUSG00000039021.16	Ttc16	chr2	protein_coding	tetratricopeptide repeat domain 16
chr2	32647462	32649539	+	32647462;32648948	32648683;32649539	ES	0.5	50	50	ENSMUST00000009707.14	ENSMUSG00000009563.17	Tor2a	chr2	protein_coding	torsin family 2, member A
chr2	32647462	32647900	+	32647462	32648683	A3SS	0.25	50	50	ENSMUST00000009707.14	ENSMUSG00000009563.17	Tor2a	chr2	protein_coding	torsin family 2, member A
chr2	32647462	32648769	+	32647462	32648683	A3SS	0.25	50	50	ENSMUST00000009707.14	ENSMUSG00000009563.17	Tor2a	chr2	protein_coding	torsin family 2, member A
chr2	32647462	32649539	+	32647462	32648683	A3SS&ES	0.25	50	50	ENSMUST00000177382.2	ENSMUSG00000009563.17	Tor2a	chr2	protein_coding	torsin family 2, member A
chr2	32647462	32649539	+	32647462;32648948	32648769;32649539	ES	0.5	50	50	ENSMUST00000156617.8	ENSMUSG00000009563.17	Tor2a	chr2	protein_coding	torsin family 2, member A
chr2	32647462	32647900	+	32647462	32648769	A3SS	0.25	50	50	ENSMUST00000156617.8	ENSMUSG00000009563.17	Tor2a	chr2	protein_coding	torsin family 2, member A
chr2	32647551	32648769	+	32647462	32648769	A5SS	0.5	50	50	ENSMUST00000156617.8	ENSMUSG00000009563.17	Tor2a	chr2	protein_coding	torsin family 2, member A
chr2	32647462	32647900	+	32647462	32649539	A3SS	0.25	50	50	ENSMUST00000175763.8	ENSMUSG00000009563.17	Tor2a	chr2	protein_coding	torsin family 2, member A
chr2	32647462	32649539	+	32648948	32649539	A5SS	0.5	50	50	ENSMUST00000149720.3	ENSMUSG00000009563.17	Tor2a	chr2	protein_coding	torsin family 2, member A
chr2	32666535	32666724	+	32666535	32666719	A3SS	0.5	50	50	ENSMUST00000066352.6	ENSMUSG00000053746.9	Ptrh1	chr2	protein_coding	peptidyl-tRNA hydrolase 1 homolog
chr2	32679649;32684725	32684600;32686028	-	32679649	32686028	cassetteExon	0.5	100	100	ENSMUST00000050000.16	ENSMUSG00000026797.17	Stxbp1	chr2	protein_coding	syntaxin binding protein 1
chr2	32713595	32737067	-	32713597	32737067	A3SS	0.5	50	50	ENSMUST00000050000.16	ENSMUSG00000026797.17	Stxbp1	chr2	protein_coding	syntaxin binding protein 1
chr2	32705039	32706909	-	32705039	32707298	A5SS	0.5	50	50	ENSMUST00000050000.16	ENSMUSG00000026797.17	Stxbp1	chr2	protein_coding	syntaxin binding protein 1
chr2	32785739	32795781	+	32766416	32795781	A5SS	0.5	50	50	ENSMUST00000028135.15	ENSMUSG00000026796.17	Niban2	chr2	protein_coding	niban apoptosis regulator 2
chr2	32806152	32809005	+	32802599	32809005	A5SS	0.33	50	50	ENSMUST00000028135.15	ENSMUSG00000026796.17	Niban2	chr2	protein_coding	niban apoptosis regulator 2
chr2	32808699	32809005	+	32802599	32809005	A5SS	0.33	50	50	ENSMUST00000028135.15	ENSMUSG00000026796.17	Niban2	chr2	protein_coding	niban apoptosis regulator 2
chr2	32811827	32812081	+	32811152	32812081	A5SS	0.5	50	50	ENSMUST00000028135.15	ENSMUSG00000026796.17	Niban2	chr2	protein_coding	niban apoptosis regulator 2
chr2	32808699	32809005	+	32806152	32809005	A5SS	0.5	50	50	ENSMUST00000154514.8	ENSMUSG00000026796.17	Niban2	chr2	protein_coding	niban apoptosis regulator 2
chr2	32849625	32851347	-	32849625	32851056	5pMXE	0.25	50	50	ENSMUST00000028132.14	ENSMUSG00000026792.17	Lrsam1	chr2	protein_coding	leucine rich repeat and sterile alpha motif containing 1
chr2	32850383	32851056	-	32849625	32851056	A3SS	0.5	50	50	ENSMUST00000028132.14	ENSMUSG00000026792.17	Lrsam1	chr2	protein_coding	leucine rich repeat and sterile alpha motif containing 1
chr2	32828896	32830248	-	32828896	32830253	A5SS	0.5	50	50	ENSMUST00000028132.14	ENSMUSG00000026792.17	Lrsam1	chr2	protein_coding	leucine rich repeat and sterile alpha motif containing 1
chr2	32847305	32848184	-	32847305	32848170	A5SS	0.5	50	50	ENSMUST00000028132.14	ENSMUSG00000026792.17	Lrsam1	chr2	protein_coding	leucine rich repeat and sterile alpha motif containing 1
chr2	32849625	32849864	-	32849625	32851056	A5SS	0.25	50	50	ENSMUST00000028132.14	ENSMUSG00000026792.17	Lrsam1	chr2	protein_coding	leucine rich repeat and sterile alpha motif containing 1
chr2	32849625	32850948	-	32849625	32851056	A5SS	0.25	50	50	ENSMUST00000028132.14	ENSMUSG00000026792.17	Lrsam1	chr2	protein_coding	leucine rich repeat and sterile alpha motif containing 1
chr2	32851267	32851552	-	32851267	32851574	A5SS	0.5	50	50	ENSMUST00000113200.8	ENSMUSG00000026792.17	Lrsam1	chr2	protein_coding	leucine rich repeat and sterile alpha motif containing 1
chr2	32849625	32849864	-	32849625	32850948	A5SS	0.25	50	50	ENSMUST00000127321.8	ENSMUSG00000026792.17	Lrsam1	chr2	protein_coding	leucine rich repeat and sterile alpha motif containing 1
chr2	32849625	32851347	-	32849625	32850948	A5SS&ES	0.25	50	50	ENSMUST00000127321.8	ENSMUSG00000026792.17	Lrsam1	chr2	protein_coding	leucine rich repeat and sterile alpha motif containing 1
chr2	32849625;32851190	32850948;32851347	-	32849625	32851347	cassetteExon	0.5	100	100	ENSMUST00000133832.8	ENSMUSG00000026792.17	Lrsam1	chr2	protein_coding	leucine rich repeat and sterile alpha motif containing 1
chr2	32849625;32851190	32851056;32851347	-	32849625	32851347	cassetteExon	0.5	100	100	ENSMUST00000133832.8	ENSMUSG00000026792.17	Lrsam1	chr2	protein_coding	leucine rich repeat and sterile alpha motif containing 1
chr2	32849625	32849864	-	32849625	32851347	A5SS	0.25	50	50	ENSMUST00000133832.8	ENSMUSG00000026792.17	Lrsam1	chr2	protein_coding	leucine rich repeat and sterile alpha motif containing 1
chr2	32851190	32851347	-	32851190	32851582	A5SS	0.5	50	50	ENSMUST00000124492.8	ENSMUSG00000026792.17	Lrsam1	chr2	protein_coding	leucine rich repeat and sterile alpha motif containing 1
chr2	32849625	32851347	-	32851190	32851347	3pMXE	0.5	50	50	ENSMUST00000138015.2	ENSMUSG00000026792.17	Lrsam1	chr2	protein_coding	leucine rich repeat and sterile alpha motif containing 1
chr2	32851972	32852061	+	32851851	32852061	A5SS	0.5	50	50	ENSMUST00000126610.2	ENSMUSG00000038900.18	Rpl12	chr2	protein_coding	ribosomal protein L12
chr2	32865496	32866149	-	32865496;32866040	32865932;32866149	ES	0.33	50	50	ENSMUST00000028129.13	ENSMUSG00000026791.15	Slc2a8	chr2	protein_coding	solute carrier family 2, (facilitated glucose transporter), member 8
chr2	32871551	32871733	-	32871579	32871733	A3SS	0.5	50	50	ENSMUST00000028129.13	ENSMUSG00000026791.15	Slc2a8	chr2	protein_coding	solute carrier family 2, (facilitated glucose transporter), member 8
chr2	32864995;32865496	32865326;32866149	-	32864995	32866149	cassetteExon	0.5	100	100	ENSMUST00000153484.7	ENSMUSG00000026791.15	Slc2a8	chr2	protein_coding	solute carrier family 2, (facilitated glucose transporter), member 8
chr2	32866040	32866149	-	32864995	32866149	A3SS	0.33	50	50	ENSMUST00000153484.7	ENSMUSG00000026791.15	Slc2a8	chr2	protein_coding	solute carrier family 2, (facilitated glucose transporter), member 8
chr2	32866292	32871970	-	32866292;32867072	32866873;32871970	ES	0.33	50	50	ENSMUST00000194066.6	ENSMUSG00000026791.15	Slc2a8	chr2	protein_coding	solute carrier family 2, (facilitated glucose transporter), member 8
chr2	32871895	32871970	-	32867072	32871970	A3SS	0.33	50	50	ENSMUST00000194066.6	ENSMUSG00000026791.15	Slc2a8	chr2	protein_coding	solute carrier family 2, (facilitated glucose transporter), member 8
chr2	32867072	32870014	-	32867072	32871970	A5SS	0.5	50	50	ENSMUST00000194066.6	ENSMUSG00000026791.15	Slc2a8	chr2	protein_coding	solute carrier family 2, (facilitated glucose transporter), member 8
chr2	32865496	32866149	-	32866040	32866149	3pMXE	0.33	50	50	ENSMUST00000195863.2	ENSMUSG00000026791.15	Slc2a8	chr2	protein_coding	solute carrier family 2, (facilitated glucose transporter), member 8
chr2	32871895	32871970	-	32866292	32871970	A3SS	0.33	50	50	ENSMUST00000195863.2	ENSMUSG00000026791.15	Slc2a8	chr2	protein_coding	solute carrier family 2, (facilitated glucose transporter), member 8
chr2	32906801	32912674	-	32906801;32908628	32908513;32912674	ES	0.5	50	50	ENSMUST00000102810.10	ENSMUSG00000038860.16	Garnl3	chr2	protein_coding	GTPase activating RANGAP domain-like 3
chr2	32975956	32994861	-	32975956	32977094	5pMXE	0.2	50	50	ENSMUST00000102810.10	ENSMUSG00000038860.16	Garnl3	chr2	protein_coding	GTPase activating RANGAP domain-like 3
chr2	32975956	32994865	-	32975956	32977094	5pMXE	0.2	50	50	ENSMUST00000102810.10	ENSMUSG00000038860.16	Garnl3	chr2	protein_coding	GTPase activating RANGAP domain-like 3
chr2	32975956	32976369	-	32975956	32977094	A5SS	0.2	50	50	ENSMUST00000102810.10	ENSMUSG00000038860.16	Garnl3	chr2	protein_coding	GTPase activating RANGAP domain-like 3
chr2	32975956	32976791	-	32975956	32977094	A5SS	0.2	50	50	ENSMUST00000102810.10	ENSMUSG00000038860.16	Garnl3	chr2	protein_coding	GTPase activating RANGAP domain-like 3
chr2	32954090	32994861	-	32954090	32975887	5pMXE	0.5	50	50	ENSMUST00000049618.9	ENSMUSG00000038860.16	Garnl3	chr2	protein_coding	GTPase activating RANGAP domain-like 3
chr2	32995035	33021603	-	32995035	33021325	5pMXE	0.33	50	50	ENSMUST00000137381.8	ENSMUSG00000038860.16	Garnl3	chr2	protein_coding	GTPase activating RANGAP domain-like 3
chr2	32975956	32976369	-	32975956	32994865	A5SS	0.2	50	50	ENSMUST00000137381.8	ENSMUSG00000038860.16	Garnl3	chr2	protein_coding	GTPase activating RANGAP domain-like 3
chr2	32975956	32976791	-	32975956	32994865	A5SS	0.2	50	50	ENSMUST00000137381.8	ENSMUSG00000038860.16	Garnl3	chr2	protein_coding	GTPase activating RANGAP domain-like 3
chr2	32975956	32994861	-	32975956	32994865	A5SS	0.2	50	50	ENSMUST00000137381.8	ENSMUSG00000038860.16	Garnl3	chr2	protein_coding	GTPase activating RANGAP domain-like 3
chr2	32995035	33020436	-	32995035	33021325	A5SS	0.33	50	50	ENSMUST00000137381.8	ENSMUSG00000038860.16	Garnl3	chr2	protein_coding	GTPase activating RANGAP domain-like 3
chr2	32954090;32975956	32975887;32994861	-	32954090	32994861	cassetteExon	0.5	100	100	ENSMUST00000139778.8	ENSMUSG00000038860.16	Garnl3	chr2	protein_coding	GTPase activating RANGAP domain-like 3
chr2	32975956	32994861	-	32975956	32976791	5pMXE	0.2	50	50	ENSMUST00000135296.8	ENSMUSG00000038860.16	Garnl3	chr2	protein_coding	GTPase activating RANGAP domain-like 3
chr2	32975956	32976369	-	32975956	32976791	A5SS	0.2	50	50	ENSMUST00000135296.8	ENSMUSG00000038860.16	Garnl3	chr2	protein_coding	GTPase activating RANGAP domain-like 3
chr2	32975956	32994861	-	32975956	32976369	5pMXE	0.2	50	50	ENSMUST00000148043.8	ENSMUSG00000038860.16	Garnl3	chr2	protein_coding	GTPase activating RANGAP domain-like 3
chr2	32995035	33020436	-	32995035	33021603	A5SS	0.33	50	50	ENSMUST00000133135.8	ENSMUSG00000038860.16	Garnl3	chr2	protein_coding	GTPase activating RANGAP domain-like 3
chr2	33174920	33226525	-	33174920;33214715	33214665;33226525	ES	0.5	50	50	ENSMUST00000131298.7	ENSMUSG00000038831.17	Ralgps1	chr2	protein_coding	Ral GEF with PH domain and SH3 binding motif 1
chr2	33036662	33048922	-	33036665	33048922	A3SS	0.33	50	50	ENSMUST00000131298.7	ENSMUSG00000038831.17	Ralgps1	chr2	protein_coding	Ral GEF with PH domain and SH3 binding motif 1
chr2	33047941	33048922	-	33036665	33048922	A3SS	0.33	50	50	ENSMUST00000131298.7	ENSMUSG00000038831.17	Ralgps1	chr2	protein_coding	Ral GEF with PH domain and SH3 binding motif 1
chr2	33035515	33045300	-	33035515	33036582	A5SS&ES	0.5	50	50	ENSMUST00000131298.7	ENSMUSG00000038831.17	Ralgps1	chr2	protein_coding	Ral GEF with PH domain and SH3 binding motif 1
chr2	33036665	33045300	-	33036665	33048922	A5SS	0.5	50	50	ENSMUST00000131298.7	ENSMUSG00000038831.17	Ralgps1	chr2	protein_coding	Ral GEF with PH domain and SH3 binding motif 1
chr2	33230845	33261304	-	33230845	33261282	A5SS	0.5	50	50	ENSMUST00000131298.7	ENSMUSG00000038831.17	Ralgps1	chr2	protein_coding	Ral GEF with PH domain and SH3 binding motif 1
chr2	33047941	33048922	-	33036662	33048922	A3SS	0.33	50	50	ENSMUST00000042615.13	ENSMUSG00000038831.17	Ralgps1	chr2	protein_coding	Ral GEF with PH domain and SH3 binding motif 1
chr2	33035515;33036662	33036582;33048922	-	33035515;33047941	33045300;33048922	MXE	0.5	100	100	ENSMUST00000113165.8	ENSMUSG00000038831.17	Ralgps1	chr2	protein_coding	Ral GEF with PH domain and SH3 binding motif 1
chr2	33035515;33036665	33036582;33045300	-	33035515	33045300	cassetteExon	0.5	100	100	ENSMUST00000113165.8	ENSMUSG00000038831.17	Ralgps1	chr2	protein_coding	Ral GEF with PH domain and SH3 binding motif 1
chr2	33035515;33036665	33036582;33048922	-	33035515;33047941	33045300;33048922	MXE	0.5	100	100	ENSMUST00000113165.8	ENSMUSG00000038831.17	Ralgps1	chr2	protein_coding	Ral GEF with PH domain and SH3 binding motif 1
chr2	33118369	33132212	+	33119044	33132212	A5SS	0.5	50	50	ENSMUST00000004208.7	ENSMUSG00000004105.9	Angptl2	chr2	protein_coding	angiopoietin-like 2
chr2	33302507	33321243	-	33302507	33318113	5pMXE	0.5	50	50	ENSMUST00000091037.3	ENSMUSG00000068966.11	Zbtb34	chr2	protein_coding	zinc finger and BTB domain containing 34
chr2	33302507	33321243	-	33302507;33318232	33318113;33321243	ES	0.5	50	50	ENSMUST00000113158.8	ENSMUSG00000068966.11	Zbtb34	chr2	protein_coding	zinc finger and BTB domain containing 34
chr2	33345135	33354926	-	33345135	33352278	5pMXE	0.5	50	50	ENSMUST00000095035.3	ENSMUSG00000026788.14	Zbtb43	chr2	protein_coding	zinc finger and BTB domain containing 43
chr2	33345135;33352369	33352278;33354926	-	33345135	33354926	cassetteExon	0.5	100	100	ENSMUST00000028125.12	ENSMUSG00000026788.14	Zbtb43	chr2	protein_coding	zinc finger and BTB domain containing 43
chr2	33355049	33358445	-	33354986	33358445	A3SS	0.5	50	50	ENSMUST00000028125.12	ENSMUSG00000026788.14	Zbtb43	chr2	protein_coding	zinc finger and BTB domain containing 43
chr2	33454805	33455073	-	33454805	33455094	A5SS	0.5	50	50	ENSMUST00000041730.12	ENSMUSG00000038765.15	Lmx1b	chr2	protein_coding	LIM homeobox transcription factor 1 beta
chr2	33459294	33522227	-	33459294	33529501	A5SS	0.5	50	50	ENSMUST00000041730.12	ENSMUSG00000038765.15	Lmx1b	chr2	protein_coding	LIM homeobox transcription factor 1 beta
chr2	33677581	33692757	-	33645057	33692757	A3SS	0.5	50	50	ENSMUST00000041555.10	ENSMUSG00000038740.10	Mvb12b	chr2	protein_coding	multivesicular body subunit 12B
chr2	33763859	33764350	-	33730278	33764350	A3SS	0.5	50	50	ENSMUST00000041555.10	ENSMUSG00000038740.10	Mvb12b	chr2	protein_coding	multivesicular body subunit 12B
chr2	33764472	33776798	-	33764472	33777332	A5SS	0.5	50	50	ENSMUST00000041555.10	ENSMUSG00000038740.10	Mvb12b	chr2	protein_coding	multivesicular body subunit 12B
chr2	33695976	33700708	+	33695976;33700351	33700057;33700708	ES	0.5	50	50	ENSMUST00000156297.2	ENSMUSG00000086484.2	Nron	chr2	lncRNA	non-protein coding RNA, repressor of NFAT
chr2	33695976	33699744	+	33695976	33700057	A3SS	0.33	50	50	ENSMUST00000156297.2	ENSMUSG00000086484.2	Nron	chr2	lncRNA	non-protein coding RNA, repressor of NFAT
chr2	33695976	33700708	+	33695976;33700351	33699744;33700708	ES	0.5	50	50	ENSMUST00000151761.2	ENSMUSG00000086484.2	Nron	chr2	lncRNA	non-protein coding RNA, repressor of NFAT
chr2	33695976	33699744	+	33695976	33700708	A3SS	0.33	50	50	ENSMUST00000140412.2	ENSMUSG00000086484.2	Nron	chr2	lncRNA	non-protein coding RNA, repressor of NFAT
chr2	34103454	34260836	-	34103454;34114658	34114417;34260836	ES	0.5	50	50	ENSMUST00000113132.9	ENSMUSG00000038718.16	Pbx3	chr2	protein_coding	pre B cell leukemia homeobox 3
chr2	34260909	34263067	-	34260909	34261733	5pMXE	0.33	50	50	ENSMUST00000113132.9	ENSMUSG00000038718.16	Pbx3	chr2	protein_coding	pre B cell leukemia homeobox 3
chr2	34065966;34066873	34066761;34068189	-	34065966	34068189	cassetteExon	0.5	100	100	ENSMUST00000113132.9	ENSMUSG00000038718.16	Pbx3	chr2	protein_coding	pre B cell leukemia homeobox 3
chr2	34103454	34114557	-	34103454	34114417	A5SS	0.33	50	50	ENSMUST00000113132.9	ENSMUSG00000038718.16	Pbx3	chr2	protein_coding	pre B cell leukemia homeobox 3
chr2	34114658	34178765	-	34114658	34260836	A5SS	0.5	50	50	ENSMUST00000113132.9	ENSMUSG00000038718.16	Pbx3	chr2	protein_coding	pre B cell leukemia homeobox 3
chr2	34260909	34261062	-	34260909	34261733	A5SS	0.33	50	50	ENSMUST00000113132.9	ENSMUSG00000038718.16	Pbx3	chr2	protein_coding	pre B cell leukemia homeobox 3
chr2	34103454;34114658	34114557;34260836	-	34103454	34260836	cassetteExon	0.5	100	100	ENSMUST00000153278.8	ENSMUSG00000038718.16	Pbx3	chr2	protein_coding	pre B cell leukemia homeobox 3
chr2	34065966	34068189	-	34066873	34068189	3pMXE	0.5	50	50	ENSMUST00000175855.3	ENSMUSG00000038718.16	Pbx3	chr2	protein_coding	pre B cell leukemia homeobox 3
chr2	34260909	34261062	-	34260909	34263067	A5SS	0.33	50	50	ENSMUST00000138021.4	ENSMUSG00000038718.16	Pbx3	chr2	protein_coding	pre B cell leukemia homeobox 3
chr2	34103454	34260836	-	34114658	34260836	3pMXE	0.5	50	50	ENSMUST00000141653.3	ENSMUSG00000038718.16	Pbx3	chr2	protein_coding	pre B cell leukemia homeobox 3
chr2	34334418;34339320	34339178;34387713	+	34334418	34387713	cassetteExon	0.5	100	100	ENSMUST00000149383.8	ENSMUSG00000038696.15	Mapkap1	chr2	protein_coding	mitogen-activated protein kinase associated protein 1
chr2	34334418;34374032	34373966;34387713	+	34334418	34387713	cassetteExon	0.5	100	100	ENSMUST00000149383.8	ENSMUSG00000038696.15	Mapkap1	chr2	protein_coding	mitogen-activated protein kinase associated protein 1
chr2	34334418	34368707	+	34334418	34387713	A3SS	0.25	50	50	ENSMUST00000149383.8	ENSMUSG00000038696.15	Mapkap1	chr2	protein_coding	mitogen-activated protein kinase associated protein 1
chr2	34297101	34322015	+	34296860	34322015	A5SS	0.25	50	50	ENSMUST00000149383.8	ENSMUSG00000038696.15	Mapkap1	chr2	protein_coding	mitogen-activated protein kinase associated protein 1
chr2	34297101	34325145	+	34322342	34325145	A5SS&ES	0.33	50	50	ENSMUST00000149383.8	ENSMUSG00000038696.15	Mapkap1	chr2	protein_coding	mitogen-activated protein kinase associated protein 1
chr2	34297266	34322015	+	34296860	34322015	A5SS	0.25	50	50	ENSMUST00000149383.8	ENSMUSG00000038696.15	Mapkap1	chr2	protein_coding	mitogen-activated protein kinase associated protein 1
chr2	34297266	34325145	+	34322342	34325145	A5SS&ES	0.33	50	50	ENSMUST00000149383.8	ENSMUSG00000038696.15	Mapkap1	chr2	protein_coding	mitogen-activated protein kinase associated protein 1
chr2	34297266	34334270	+	34325234	34334270	A5SS&ES	0.33	50	50	ENSMUST00000149383.8	ENSMUSG00000038696.15	Mapkap1	chr2	protein_coding	mitogen-activated protein kinase associated protein 1
chr2	34319638	34322015	+	34296860	34322015	A5SS	0.25	50	50	ENSMUST00000149383.8	ENSMUSG00000038696.15	Mapkap1	chr2	protein_coding	mitogen-activated protein kinase associated protein 1
chr2	34328563	34334270	+	34325234	34334270	A5SS	0.33	50	50	ENSMUST00000149383.8	ENSMUSG00000038696.15	Mapkap1	chr2	protein_coding	mitogen-activated protein kinase associated protein 1
chr2	34297266	34334270	+	34297266;34325234	34325145;34334270	ES	0.33	50	50	ENSMUST00000124443.8	ENSMUSG00000038696.15	Mapkap1	chr2	protein_coding	mitogen-activated protein kinase associated protein 1
chr2	34423909	34471204	+	34423909;34453174	34453067;34471204	ES	0.5	50	50	ENSMUST00000124443.8	ENSMUSG00000038696.15	Mapkap1	chr2	protein_coding	mitogen-activated protein kinase associated protein 1
chr2	34297266;34322342	34322015;34325145	+	34297266	34325145	cassetteExon	0.5	100	100	ENSMUST00000124443.8	ENSMUSG00000038696.15	Mapkap1	chr2	protein_coding	mitogen-activated protein kinase associated protein 1
chr2	34297266	34319530	+	34297266	34325145	A3SS	0.25	50	50	ENSMUST00000124443.8	ENSMUSG00000038696.15	Mapkap1	chr2	protein_coding	mitogen-activated protein kinase associated protein 1
chr2	34297101	34325145	+	34297266	34325145	A5SS	0.33	50	50	ENSMUST00000124443.8	ENSMUSG00000038696.15	Mapkap1	chr2	protein_coding	mitogen-activated protein kinase associated protein 1
chr2	34509689	34509857	+	34487572	34509857	A5SS	0.5	50	50	ENSMUST00000124443.8	ENSMUSG00000038696.15	Mapkap1	chr2	protein_coding	mitogen-activated protein kinase associated protein 1
chr2	34297266	34322015	+	34297266;34319638	34319530;34322015	ES	0.33	50	50	ENSMUST00000141253.2	ENSMUSG00000038696.15	Mapkap1	chr2	protein_coding	mitogen-activated protein kinase associated protein 1
chr2	34297101	34322015	+	34319638	34322015	A5SS&ES	0.33	50	50	ENSMUST00000141253.2	ENSMUSG00000038696.15	Mapkap1	chr2	protein_coding	mitogen-activated protein kinase associated protein 1
chr2	34334418	34373966	+	34334418	34368707	3pMXE	0.25	50	50	ENSMUST00000156967.8	ENSMUSG00000038696.15	Mapkap1	chr2	protein_coding	mitogen-activated protein kinase associated protein 1
chr2	34297266	34319530	+	34297266	34334270	A3SS	0.25	50	50	ENSMUST00000156967.8	ENSMUSG00000038696.15	Mapkap1	chr2	protein_coding	mitogen-activated protein kinase associated protein 1
chr2	34297266	34322015	+	34297266	34334270	A3SS	0.25	50	50	ENSMUST00000156967.8	ENSMUSG00000038696.15	Mapkap1	chr2	protein_coding	mitogen-activated protein kinase associated protein 1
chr2	34334418	34339178	+	34334418	34368707	A3SS	0.25	50	50	ENSMUST00000156967.8	ENSMUSG00000038696.15	Mapkap1	chr2	protein_coding	mitogen-activated protein kinase associated protein 1
chr2	34328563	34334270	+	34297266	34334270	A5SS	0.33	50	50	ENSMUST00000156967.8	ENSMUSG00000038696.15	Mapkap1	chr2	protein_coding	mitogen-activated protein kinase associated protein 1
chr2	34297101	34325145	+	34297101;34322342	34322015;34325145	ES	0.33	50	50	ENSMUST00000113124.8	ENSMUSG00000038696.15	Mapkap1	chr2	protein_coding	mitogen-activated protein kinase associated protein 1
chr2	34297266	34322015	+	34297101	34322015	A5SS	0.25	50	50	ENSMUST00000113124.8	ENSMUSG00000038696.15	Mapkap1	chr2	protein_coding	mitogen-activated protein kinase associated protein 1
chr2	34334418;34339320	34339178;34387713	+	34334418;34374032	34373966;34387713	MXE	0.5	100	100	ENSMUST00000138933.8	ENSMUSG00000038696.15	Mapkap1	chr2	protein_coding	mitogen-activated protein kinase associated protein 1
chr2	34585620	34590775	-	34585620;34589918	34589838;34590775	ES	0.5	50	50	ENSMUST00000102800.9	ENSMUSG00000026867.20	Gapvd1	chr2	protein_coding	GTPase activating protein and VPS9 domains 1
chr2	34594542	34596032	-	34594542;34594725	34594648;34596032	ES	0.5	50	50	ENSMUST00000102800.9	ENSMUSG00000026867.20	Gapvd1	chr2	protein_coding	GTPase activating protein and VPS9 domains 1
chr2	34610740;34613030	34612950;34615055	-	34610740	34615055	cassetteExon	0.5	100	100	ENSMUST00000102800.9	ENSMUSG00000026867.20	Gapvd1	chr2	protein_coding	GTPase activating protein and VPS9 domains 1
chr2	34620692;34624619	34624563;34644278	-	34620692	34644278	cassetteExon	0.5	100	100	ENSMUST00000102800.9	ENSMUSG00000026867.20	Gapvd1	chr2	protein_coding	GTPase activating protein and VPS9 domains 1
chr2	34571757	34574194	-	34571719	34574194	A3SS	0.5	50	50	ENSMUST00000102800.9	ENSMUSG00000026867.20	Gapvd1	chr2	protein_coding	GTPase activating protein and VPS9 domains 1
chr2	34596151	34596753	-	34596151	34596710	A5SS	0.5	50	50	ENSMUST00000102800.9	ENSMUSG00000026867.20	Gapvd1	chr2	protein_coding	GTPase activating protein and VPS9 domains 1
chr2	34605342	34607265	-	34605342	34607328	A5SS	0.5	50	50	ENSMUST00000102800.9	ENSMUSG00000026867.20	Gapvd1	chr2	protein_coding	GTPase activating protein and VPS9 domains 1
chr2	34585620	34594178	-	34585620;34590862	34590775;34594178	ES	0.5	50	50	ENSMUST00000113101.8	ENSMUSG00000026867.20	Gapvd1	chr2	protein_coding	GTPase activating protein and VPS9 domains 1
chr2	34594542	34596032	-	34594542	34594648	5pMXE	0.5	50	50	ENSMUST00000167251.2	ENSMUSG00000026867.20	Gapvd1	chr2	protein_coding	GTPase activating protein and VPS9 domains 1
chr2	34585620	34589838	-	34585620	34594178	A5SS	0.33	50	50	ENSMUST00000167251.2	ENSMUSG00000026867.20	Gapvd1	chr2	protein_coding	GTPase activating protein and VPS9 domains 1
chr2	34585620	34590775	-	34589918	34590775	3pMXE	0.5	50	50	ENSMUST00000137528.8	ENSMUSG00000026867.20	Gapvd1	chr2	protein_coding	GTPase activating protein and VPS9 domains 1
chr2	34675740	34685184	-	34675740;34680667	34680515;34685184	ES	0.33	50	50	ENSMUST00000145903.8	ENSMUSG00000070953.14	Rabepk	chr2	protein_coding	Rab9 effector protein with kelch motifs
chr2	34680667	34687387	-	34680667;34685341	34685184;34687387	ES	0.5	50	50	ENSMUST00000145903.8	ENSMUSG00000070953.14	Rabepk	chr2	protein_coding	Rab9 effector protein with kelch motifs
chr2	34675737	34680515	-	34675740	34680515	A3SS	0.5	50	50	ENSMUST00000145903.8	ENSMUSG00000070953.14	Rabepk	chr2	protein_coding	Rab9 effector protein with kelch motifs
chr2	34680579	34685184	-	34680667	34685184	A3SS	0.33	50	50	ENSMUST00000145903.8	ENSMUSG00000070953.14	Rabepk	chr2	protein_coding	Rab9 effector protein with kelch motifs
chr2	34685341	34687383	-	34685341	34687387	A5SS	0.5	50	50	ENSMUST00000145903.8	ENSMUSG00000070953.14	Rabepk	chr2	protein_coding	Rab9 effector protein with kelch motifs
chr2	34687445	34689435	-	34687445	34689763	A5SS	0.33	50	50	ENSMUST00000145903.8	ENSMUSG00000070953.14	Rabepk	chr2	protein_coding	Rab9 effector protein with kelch motifs
chr2	34687445	34689517	-	34687445	34689763	A5SS	0.33	50	50	ENSMUST00000145903.8	ENSMUSG00000070953.14	Rabepk	chr2	protein_coding	Rab9 effector protein with kelch motifs
chr2	34675740;34680579	34680515;34685184	-	34675740	34685184	cassetteExon	0.5	100	100	ENSMUST00000113086.9	ENSMUSG00000070953.14	Rabepk	chr2	protein_coding	Rab9 effector protein with kelch motifs
chr2	34675740;34680667	34680515;34687387	-	34675740;34685341	34685184;34687387	MXE	0.5	100	100	ENSMUST00000113086.9	ENSMUSG00000070953.14	Rabepk	chr2	protein_coding	Rab9 effector protein with kelch motifs
chr2	34687445	34689435	-	34687445	34689517	A5SS	0.33	50	50	ENSMUST00000113086.9	ENSMUSG00000070953.14	Rabepk	chr2	protein_coding	Rab9 effector protein with kelch motifs
chr2	34680667	34687387	-	34680667	34685184	A5SS&ES	0.5	50	50	ENSMUST00000140663.8	ENSMUSG00000070953.14	Rabepk	chr2	protein_coding	Rab9 effector protein with kelch motifs
chr2	34701128	34712570	-	34701128;34703021	34702827;34712570	ES	0.33	50	50	ENSMUST00000156130.2	ENSMUSG00000035949.16	Fbxw2	chr2	protein_coding	F-box and WD-40 domain protein 2
chr2	34696011;34697459	34697290;34698526	-	34696011	34698526	cassetteExon	0.5	100	100	ENSMUST00000156130.2	ENSMUSG00000035949.16	Fbxw2	chr2	protein_coding	F-box and WD-40 domain protein 2
chr2	34706135	34712570	-	34703021	34712570	A3SS	0.33	50	50	ENSMUST00000156130.2	ENSMUSG00000035949.16	Fbxw2	chr2	protein_coding	F-box and WD-40 domain protein 2
chr2	34712987	34715974	-	34713079	34715974	A3SS	0.5	50	50	ENSMUST00000028220.10	ENSMUSG00000035949.16	Fbxw2	chr2	protein_coding	F-box and WD-40 domain protein 2
chr2	34713079	34715692	-	34713079	34715974	A5SS	0.5	50	50	ENSMUST00000028220.10	ENSMUSG00000035949.16	Fbxw2	chr2	protein_coding	F-box and WD-40 domain protein 2
chr2	34706135	34712570	-	34701128	34712570	A3SS	0.33	50	50	ENSMUST00000113077.8	ENSMUSG00000035949.16	Fbxw2	chr2	protein_coding	F-box and WD-40 domain protein 2
chr2	34696011	34698526	-	34697459	34698526	3pMXE	0.5	50	50	ENSMUST00000113075.8	ENSMUSG00000035949.16	Fbxw2	chr2	protein_coding	F-box and WD-40 domain protein 2
chr2	34701128	34712570	-	34703021	34712570	3pMXE	0.33	50	50	ENSMUST00000131534.8	ENSMUSG00000035949.16	Fbxw2	chr2	protein_coding	F-box and WD-40 domain protein 2
chr2	34742845	34746460	-	34742845;34744404	34744264;34746460	ES	0.5	50	50	ENSMUST00000028225.12	ENSMUSG00000026869.13	Psmd5	chr2	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 5
chr2	34757049	34764657	-	34757049	34760762	5pMXE	0.5	50	50	ENSMUST00000028225.12	ENSMUSG00000026869.13	Psmd5	chr2	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 5
chr2	34777809	34780292	+	34777809;34778183	34778134;34780292	ES	0.5	50	50	ENSMUST00000113068.9	ENSMUSG00000026870.20	Cutal	chr2	protein_coding	cutA divalent cation tolerance homolog-like
chr2	34788171	34789595	-	34788171;34789023	34788936;34789595	ES	0.5	50	50	ENSMUST00000028232.7	ENSMUSG00000026873.10	Phf19	chr2	protein_coding	PHD finger protein 19
chr2	34789660	34793364	-	34793268	34793364	A3SS&ES	0.5	50	50	ENSMUST00000028232.7	ENSMUSG00000026873.10	Phf19	chr2	protein_coding	PHD finger protein 19
chr2	34801817	34803953	-	34801814	34803953	A3SS	0.5	50	50	ENSMUST00000028232.7	ENSMUSG00000026873.10	Phf19	chr2	protein_coding	PHD finger protein 19
chr2	34794162	34794619	-	34794162	34795462	A5SS	0.5	50	50	ENSMUST00000028232.7	ENSMUSG00000026873.10	Phf19	chr2	protein_coding	PHD finger protein 19
chr2	34848238	34848525	-	34848118	34848525	A3SS	0.5	50	50	ENSMUST00000028234.12	ENSMUSG00000026875.15	Traf1	chr2	protein_coding	TNF receptor-associated factor 1
chr2	34879230	34909477	-	34908168	34909477	A3SS&ES	0.5	50	50	ENSMUST00000028233.7	ENSMUSG00000026874.11	Hc	chr2	protein_coding	hemolytic complement
chr2	34881714	34882771	-	34881714	34884974	A5SS	0.5	50	50	ENSMUST00000028233.7	ENSMUSG00000026874.11	Hc	chr2	protein_coding	hemolytic complement
chr2	34985935	34990577	-	34985935;34988095	34987900;34990577	ES	0.33	50	50	ENSMUST00000226631.2	ENSMUSG00000035875.16	AI182371	chr2	protein_coding	expressed sequence AI182371
chr2	34974734	34975183	-	34972503	34975183	A3SS	0.5	50	50	ENSMUST00000226631.2	ENSMUSG00000035875.16	AI182371	chr2	protein_coding	expressed sequence AI182371
chr2	34988092	34990577	-	34988095	34990577	A3SS	0.33	50	50	ENSMUST00000226631.2	ENSMUSG00000035875.16	AI182371	chr2	protein_coding	expressed sequence AI182371
chr2	34976525	34978701	-	34976525	34978752	A5SS	0.5	50	50	ENSMUST00000226631.2	ENSMUSG00000035875.16	AI182371	chr2	protein_coding	expressed sequence AI182371
chr2	34985935;34988092	34987900;34990577	-	34985935	34990577	cassetteExon	0.5	100	100	ENSMUST00000134940.9	ENSMUSG00000035875.16	AI182371	chr2	protein_coding	expressed sequence AI182371
chr2	34985935	34990577	-	34985935	34987900	A5SS&ES	0.5	50	50	ENSMUST00000154817.2	ENSMUSG00000035875.16	AI182371	chr2	protein_coding	expressed sequence AI182371
chr2	35050673	35051941	+	35050673;35050929	35050803;35051941	ES	0.5	50	50	ENSMUST00000156933.8	ENSMUSG00000057110.16	Cntrl	chr2	protein_coding	centriolin
chr2	35035248	35037247	+	35035248	35037244	A3SS	0.5	50	50	ENSMUST00000156933.8	ENSMUSG00000057110.16	Cntrl	chr2	protein_coding	centriolin
chr2	35022425	35023970	+	35019827	35023970	A5SS	0.33	50	50	ENSMUST00000156933.8	ENSMUSG00000057110.16	Cntrl	chr2	protein_coding	centriolin
chr2	35023124	35023970	+	35019827	35023970	A5SS	0.33	50	50	ENSMUST00000156933.8	ENSMUSG00000057110.16	Cntrl	chr2	protein_coding	centriolin
chr2	35022425;35023124	35022981;35023970	+	35022425	35023970	cassetteExon	0.5	100	100	ENSMUST00000113034.8	ENSMUSG00000057110.16	Cntrl	chr2	protein_coding	centriolin
chr2	35080089	35082633	-	35080089;35081577	35081524;35082633	ES	0.33	50	50	ENSMUST00000028238.15	ENSMUSG00000026878.18	Rab14	chr2	protein_coding	RAB14, member RAS oncogene family
chr2	35081577;35082208	35081991;35082633	-	35081577	35082633	cassetteExon	0.5	100	100	ENSMUST00000028238.15	ENSMUSG00000026878.18	Rab14	chr2	protein_coding	RAB14, member RAS oncogene family
chr2	35072580	35073405	-	35072459	35073405	A3SS	0.5	50	50	ENSMUST00000028238.15	ENSMUSG00000026878.18	Rab14	chr2	protein_coding	RAB14, member RAS oncogene family
chr2	35090021	35090772	-	35082691	35090772	A3SS	0.5	50	50	ENSMUST00000028238.15	ENSMUSG00000026878.18	Rab14	chr2	protein_coding	RAB14, member RAS oncogene family
chr2	35082691	35090693	-	35082691	35090772	A5SS	0.5	50	50	ENSMUST00000028238.15	ENSMUSG00000026878.18	Rab14	chr2	protein_coding	RAB14, member RAS oncogene family
chr2	35082208	35082633	-	35080089	35082633	A3SS	0.33	50	50	ENSMUST00000230751.2	ENSMUSG00000026878.18	Rab14	chr2	protein_coding	RAB14, member RAS oncogene family
chr2	35146485	35173917	+	35146485;35156915	35156832;35173917	ES	0.2	50	50	ENSMUST00000201185.4	ENSMUSG00000026879.15	Gsn	chr2	protein_coding	gelsolin
chr2	35146485;35169730	35169675;35173917	+	35146485;35156915	35156832;35173917	MXE	0.5	100	100	ENSMUST00000201185.4	ENSMUSG00000026879.15	Gsn	chr2	protein_coding	gelsolin
chr2	35156915;35172733	35172663;35173917	+	35156915	35173917	cassetteExon	0.5	100	100	ENSMUST00000201185.4	ENSMUSG00000026879.15	Gsn	chr2	protein_coding	gelsolin
chr2	35156915;35172733	35172672;35173917	+	35156915	35173917	cassetteExon	0.5	100	100	ENSMUST00000201185.4	ENSMUSG00000026879.15	Gsn	chr2	protein_coding	gelsolin
chr2	35172613	35173917	+	35156915	35173917	A5SS	0.2	50	50	ENSMUST00000201185.4	ENSMUSG00000026879.15	Gsn	chr2	protein_coding	gelsolin
chr2	35146485;35169730	35169675;35173917	+	35146485;35172733	35156832;35173917	MXE	0.5	100	100	ENSMUST00000202990.4	ENSMUSG00000026879.15	Gsn	chr2	protein_coding	gelsolin
chr2	35156915	35172672	+	35156915	35172663	A3SS	0.33	50	50	ENSMUST00000202990.4	ENSMUSG00000026879.15	Gsn	chr2	protein_coding	gelsolin
chr2	35172613	35173917	+	35172733	35173917	A5SS&ES	0.2	50	50	ENSMUST00000202990.4	ENSMUSG00000026879.15	Gsn	chr2	protein_coding	gelsolin
chr2	35146485;35169730	35169675;35173917	+	35146485	35173917	cassetteExon	0.5	100	100	ENSMUST00000202899.4	ENSMUSG00000026879.15	Gsn	chr2	protein_coding	gelsolin
chr2	35172613	35173917	+	35146485	35173917	A5SS	0.2	50	50	ENSMUST00000202899.4	ENSMUSG00000026879.15	Gsn	chr2	protein_coding	gelsolin
chr2	35172733	35173917	+	35146485	35173917	A5SS	0.2	50	50	ENSMUST00000202899.4	ENSMUSG00000026879.15	Gsn	chr2	protein_coding	gelsolin
chr2	35172613	35173917	+	35169730	35173917	A5SS	0.2	50	50	ENSMUST00000142324.8	ENSMUSG00000026879.15	Gsn	chr2	protein_coding	gelsolin
chr2	35172733	35173917	+	35169730	35173917	A5SS	0.2	50	50	ENSMUST00000142324.8	ENSMUSG00000026879.15	Gsn	chr2	protein_coding	gelsolin
chr2	35279622	35286918	-	35279622;35280569	35280486;35286918	ES	0.5	50	50	ENSMUST00000113010.9	ENSMUSG00000079421.9	4930402F06Rik	chr2	protein_coding	RIKEN cDNA 4930402F06 gene
chr2	35303439;35304296	35304231;35312192	-	35303439	35312192	cassetteExon	0.5	100	100	ENSMUST00000079424.11	ENSMUSG00000035778.18	Ggta1	chr2	protein_coding	glycoprotein galactosyltransferase alpha 1, 3
chr2	35303439;35306519	35306484;35312192	-	35303439	35312192	cassetteExon	0.5	100	100	ENSMUST00000079424.11	ENSMUSG00000035778.18	Ggta1	chr2	protein_coding	glycoprotein galactosyltransferase alpha 1, 3
chr2	35313423	35322526	-	35313424	35322526	A3SS	0.5	50	50	ENSMUST00000079424.11	ENSMUSG00000035778.18	Ggta1	chr2	protein_coding	glycoprotein galactosyltransferase alpha 1, 3
chr2	35322644	35352357	-	35322644	35351207	5pMXE	0.25	50	50	ENSMUST00000113002.9	ENSMUSG00000035778.18	Ggta1	chr2	protein_coding	glycoprotein galactosyltransferase alpha 1, 3
chr2	35303439;35306519	35306484;35312192	-	35303439;35304296	35304231;35312192	MXE	0.5	100	100	ENSMUST00000113002.9	ENSMUSG00000035778.18	Ggta1	chr2	protein_coding	glycoprotein galactosyltransferase alpha 1, 3
chr2	35304296;35306519	35306484;35312192	-	35304296	35312192	cassetteExon	0.5	100	100	ENSMUST00000113002.9	ENSMUSG00000035778.18	Ggta1	chr2	protein_coding	glycoprotein galactosyltransferase alpha 1, 3
chr2	35322644	35332041	-	35322644	35351207	A5SS	0.25	50	50	ENSMUST00000113002.9	ENSMUSG00000035778.18	Ggta1	chr2	protein_coding	glycoprotein galactosyltransferase alpha 1, 3
chr2	35322644	35335708	-	35322644	35351207	A5SS	0.25	50	50	ENSMUST00000113002.9	ENSMUSG00000035778.18	Ggta1	chr2	protein_coding	glycoprotein galactosyltransferase alpha 1, 3
chr2	35303439;35304296	35304231;35306484	-	35303439	35306484	cassetteExon	0.5	100	100	ENSMUST00000113001.9	ENSMUSG00000035778.18	Ggta1	chr2	protein_coding	glycoprotein galactosyltransferase alpha 1, 3
chr2	35322644	35335708	-	35322644	35332041	5pMXE	0.25	50	50	ENSMUST00000131745.8	ENSMUSG00000035778.18	Ggta1	chr2	protein_coding	glycoprotein galactosyltransferase alpha 1, 3
chr2	35322644	35352357	-	35322644	35332041	5pMXE	0.25	50	50	ENSMUST00000131745.8	ENSMUSG00000035778.18	Ggta1	chr2	protein_coding	glycoprotein galactosyltransferase alpha 1, 3
chr2	35322644	35352357	-	35322644	35335708	5pMXE	0.25	50	50	ENSMUST00000130913.8	ENSMUSG00000035778.18	Ggta1	chr2	protein_coding	glycoprotein galactosyltransferase alpha 1, 3
chr2	35610753	35613041	+	35610753;35611425	35611273;35613041	ES	0.5	50	50	ENSMUST00000112986.9	ENSMUSG00000026883.18	Dab2ip	chr2	protein_coding	disabled 2 interacting protein
chr2	35597813;35598368	35598212;35598826	+	35597813	35598826	cassetteExon	0.5	100	100	ENSMUST00000112986.9	ENSMUSG00000026883.18	Dab2ip	chr2	protein_coding	disabled 2 interacting protein
chr2	35608950	35609931	+	35608950	35609865	A3SS	0.5	50	50	ENSMUST00000112986.9	ENSMUSG00000026883.18	Dab2ip	chr2	protein_coding	disabled 2 interacting protein
chr2	35618140	35620436	+	35618140	35619123	A3SS	0.5	50	50	ENSMUST00000112986.9	ENSMUSG00000026883.18	Dab2ip	chr2	protein_coding	disabled 2 interacting protein
chr2	35471145	35533900	+	35448624	35533900	A5SS	0.25	50	50	ENSMUST00000112986.9	ENSMUSG00000026883.18	Dab2ip	chr2	protein_coding	disabled 2 interacting protein
chr2	35473061	35533900	+	35448624	35533900	A5SS	0.25	50	50	ENSMUST00000112986.9	ENSMUSG00000026883.18	Dab2ip	chr2	protein_coding	disabled 2 interacting protein
chr2	35512295	35533900	+	35448624	35533900	A5SS	0.25	50	50	ENSMUST00000112986.9	ENSMUSG00000026883.18	Dab2ip	chr2	protein_coding	disabled 2 interacting protein
chr2	35534136	35551504	+	35534003	35551504	A5SS	0.5	50	50	ENSMUST00000112986.9	ENSMUSG00000026883.18	Dab2ip	chr2	protein_coding	disabled 2 interacting protein
chr2	35551929	35597660	+	35551637	35597660	A5SS	0.2	50	50	ENSMUST00000112986.9	ENSMUSG00000026883.18	Dab2ip	chr2	protein_coding	disabled 2 interacting protein
chr2	35582386	35597660	+	35551637	35597660	A5SS	0.2	50	50	ENSMUST00000112986.9	ENSMUSG00000026883.18	Dab2ip	chr2	protein_coding	disabled 2 interacting protein
chr2	35582422	35597660	+	35551637	35597660	A5SS	0.2	50	50	ENSMUST00000112986.9	ENSMUSG00000026883.18	Dab2ip	chr2	protein_coding	disabled 2 interacting protein
chr2	35586819	35597660	+	35551637	35597660	A5SS	0.2	50	50	ENSMUST00000112986.9	ENSMUSG00000026883.18	Dab2ip	chr2	protein_coding	disabled 2 interacting protein
chr2	35473061	35533900	+	35471145	35533900	A5SS	0.25	50	50	ENSMUST00000112987.8	ENSMUSG00000026883.18	Dab2ip	chr2	protein_coding	disabled 2 interacting protein
chr2	35512295	35533900	+	35471145	35533900	A5SS	0.25	50	50	ENSMUST00000112987.8	ENSMUSG00000026883.18	Dab2ip	chr2	protein_coding	disabled 2 interacting protein
chr2	35512295	35533900	+	35473061	35533900	A5SS	0.25	50	50	ENSMUST00000135741.8	ENSMUSG00000026883.18	Dab2ip	chr2	protein_coding	disabled 2 interacting protein
chr2	35582386	35597660	+	35551929	35597660	A5SS	0.2	50	50	ENSMUST00000138957.2	ENSMUSG00000026883.18	Dab2ip	chr2	protein_coding	disabled 2 interacting protein
chr2	35582422	35597660	+	35551929	35597660	A5SS	0.2	50	50	ENSMUST00000138957.2	ENSMUSG00000026883.18	Dab2ip	chr2	protein_coding	disabled 2 interacting protein
chr2	35586819	35597660	+	35551929	35597660	A5SS	0.2	50	50	ENSMUST00000138957.2	ENSMUSG00000026883.18	Dab2ip	chr2	protein_coding	disabled 2 interacting protein
chr2	35582386	35597660	+	35582422	35597660	A5SS	0.2	50	50	ENSMUST00000065001.12	ENSMUSG00000026883.18	Dab2ip	chr2	protein_coding	disabled 2 interacting protein
chr2	35586819	35597660	+	35582422	35597660	A5SS	0.2	50	50	ENSMUST00000065001.12	ENSMUSG00000026883.18	Dab2ip	chr2	protein_coding	disabled 2 interacting protein
chr2	35586819	35597660	+	35582386	35597660	A5SS	0.2	50	50	ENSMUST00000124098.8	ENSMUSG00000026883.18	Dab2ip	chr2	protein_coding	disabled 2 interacting protein
chr2	35685614	35779277	-	35685614;35707833	35707735;35779277	ES	0.5	50	50	ENSMUST00000028248.11	ENSMUSG00000026885.14	Ttll11	chr2	protein_coding	tubulin tyrosine ligase-like family, member 11
chr2	35793157	35834875	-	35793157;35830819	35830686;35834875	ES	0.5	50	50	ENSMUST00000028248.11	ENSMUSG00000026885.14	Ttll11	chr2	protein_coding	tubulin tyrosine ligase-like family, member 11
chr2	35779382	35780284	-	35779392	35780284	A3SS	0.5	50	50	ENSMUST00000028248.11	ENSMUSG00000026885.14	Ttll11	chr2	protein_coding	tubulin tyrosine ligase-like family, member 11
chr2	35685614	35771914	-	35685614	35707735	A5SS&ES	0.33	50	50	ENSMUST00000028248.11	ENSMUSG00000026885.14	Ttll11	chr2	protein_coding	tubulin tyrosine ligase-like family, member 11
chr2	35834971	35840496	-	35834971	35869184	A5SS	0.33	50	50	ENSMUST00000028248.11	ENSMUSG00000026885.14	Ttll11	chr2	protein_coding	tubulin tyrosine ligase-like family, member 11
chr2	35834971	35842300	-	35834971	35869184	A5SS	0.33	50	50	ENSMUST00000028248.11	ENSMUSG00000026885.14	Ttll11	chr2	protein_coding	tubulin tyrosine ligase-like family, member 11
chr2	35685614	35771914	-	35685614	35779277	A5SS	0.33	50	50	ENSMUST00000112976.9	ENSMUSG00000026885.14	Ttll11	chr2	protein_coding	tubulin tyrosine ligase-like family, member 11
chr2	35793157	35834875	-	35793157	35830686	5pMXE	0.5	50	50	ENSMUST00000160906.2	ENSMUSG00000026885.14	Ttll11	chr2	protein_coding	tubulin tyrosine ligase-like family, member 11
chr2	35834971	35842300	-	35834971	35840496	5pMXE	0.33	50	50	ENSMUST00000140201.8	ENSMUSG00000026885.14	Ttll11	chr2	protein_coding	tubulin tyrosine ligase-like family, member 11
chr2	35974087	35980974	-	35974087;35977483	35977380;35980974	ES	0.5	50	50	ENSMUST00000112961.10	ENSMUSG00000026890.20	Lhx6	chr2	protein_coding	LIM homeobox protein 6
chr2	35992376	35992870	-	35984445	35992870	A3SS	0.5	50	50	ENSMUST00000112961.10	ENSMUSG00000026890.20	Lhx6	chr2	protein_coding	LIM homeobox protein 6
chr2	35993977	35994782	-	35993977	35995136	A5SS	0.5	50	50	ENSMUST00000112960.8	ENSMUSG00000026890.20	Lhx6	chr2	protein_coding	LIM homeobox protein 6
chr2	36012950	36024147	-	36012950;36017263	36017137;36024147	ES	0.33	50	50	ENSMUST00000028251.10	ENSMUSG00000026889.13	Rbm18	chr2	protein_coding	RNA binding motif protein 18
chr2	36017263;36019146	36019053;36024147	-	36017263	36024147	cassetteExon	0.5	100	100	ENSMUST00000028251.10	ENSMUSG00000026889.13	Rbm18	chr2	protein_coding	RNA binding motif protein 18
chr2	36012950	36017193	-	36012950	36017137	A5SS	0.33	50	50	ENSMUST00000028251.10	ENSMUSG00000026889.13	Rbm18	chr2	protein_coding	RNA binding motif protein 18
chr2	36012950;36017263	36017193;36024147	-	36012950	36024147	cassetteExon	0.5	100	100	ENSMUST00000122456.8	ENSMUSG00000026889.13	Rbm18	chr2	protein_coding	RNA binding motif protein 18
chr2	36019146	36024147	-	36012950	36024147	A3SS	0.33	50	50	ENSMUST00000122456.8	ENSMUSG00000026889.13	Rbm18	chr2	protein_coding	RNA binding motif protein 18
chr2	36012950	36024147	-	36017263	36024147	3pMXE	0.33	50	50	ENSMUST00000142809.2	ENSMUSG00000026889.13	Rbm18	chr2	protein_coding	RNA binding motif protein 18
chr2	36031669;36037461	36037365;36037915	+	36031669	36037915	cassetteExon	0.5	100	100	ENSMUST00000028250.9	ENSMUSG00000026887.10	Mrrf	chr2	protein_coding	mitochondrial ribosome recycling factor
chr2	36037247	36037915	+	36031669	36037915	A5SS	0.33	50	50	ENSMUST00000028250.9	ENSMUSG00000026887.10	Mrrf	chr2	protein_coding	mitochondrial ribosome recycling factor
chr2	36037247	36037915	+	36037461	36037915	A5SS&ES	0.33	50	50	ENSMUST00000132042.2	ENSMUSG00000026887.10	Mrrf	chr2	protein_coding	mitochondrial ribosome recycling factor
chr2	36092878	36102537	+	36092878	36094156	3pMXE	0.5	50	50	ENSMUST00000123224.2	ENSMUSG00000085141.2	Gm13429	chr2	lncRNA	predicted gene 13429
chr2	36101097	36102537	+	36092878	36102537	A5SS	0.5	50	50	ENSMUST00000138755.2	ENSMUSG00000085141.2	Gm13429	chr2	lncRNA	predicted gene 13429
chr2	36126377	36127219	+	36120775	36127219	A5SS	0.5	50	50	ENSMUST00000062069.6	ENSMUSG00000047250.14	Ptgs1	chr2	protein_coding	prostaglandin-endoperoxide synthase 1
chr2	36263636	36266769	+	36263636	36266772	A3SS	0.5	50	50	ENSMUST00000072114.4	ENSMUSG00000068950.4	Olfr338	chr2	protein_coding	olfactory receptor 338
chr2	36674446	36676536	+	36674352	36676536	A5SS	0.5	50	50	ENSMUST00000213498.2	ENSMUSG00000049315.5	Olfr348	chr2	protein_coding	olfactory receptor 348
chr2	36674446	36676533	+	36674446	36676536	A3SS	0.5	50	50	ENSMUST00000214909.3	ENSMUSG00000049315.5	Olfr348	chr2	protein_coding	olfactory receptor 348
chr2	36680728	36682489	+	36680728	36682585	A3SS	0.5	50	50	ENSMUST00000217041.3	ENSMUSG00000111021.3	Olfr50	chr2	protein_coding	olfactory receptor 50
chr2	36736490	36736731	+	36736490	36736667	A3SS	0.5	50	50	ENSMUST00000215100.2	ENSMUSG00000050015.4	Olfr350	chr2	protein_coding	olfactory receptor 350
chr2	36750371	36752638	-	36750371	36752067	A5SS	0.5	50	50	ENSMUST00000213676.2	ENSMUSG00000075383.5	Olfr351	chr2	protein_coding	olfactory receptor 351
chr2	36780871	36782109	-	36780871	36782343	A5SS	0.5	50	50	ENSMUST00000217215.3	ENSMUSG00000075382.4	Olfr353	chr2	protein_coding	olfactory receptor 353
chr2	36795883	36798006	+	36795883	36796704	A3SS	0.5	50	50	ENSMUST00000217479.2	ENSMUSG00000055088.6	Olfr354	chr2	protein_coding	olfactory receptor 354
chr2	36975777;36977170	36977104;36978231	-	36975777	36978231	cassetteExon	0.5	100	100	ENSMUST00000216663.2	ENSMUSG00000075378.3	Olfr361	chr2	protein_coding	olfactory receptor 361
chr2	36996098	37007776	-	36996085	37007776	A3SS	0.5	50	50	ENSMUST00000213817.2	ENSMUSG00000075377.3	Olfr362	chr2	protein_coding	olfactory receptor 362
chr2	37029442;37029937	37029758;37033814	+	37029442	37033814	cassetteExon	0.5	100	100	ENSMUST00000214905.2	ENSMUSG00000078198.3	Olfr364-ps1	chr2	protein_coding	olfactory receptor 364, pseudogene 1
chr2	37033883	37036153	+	37033978	37036153	A5SS	0.5	50	50	ENSMUST00000214905.2	ENSMUSG00000078198.3	Olfr364-ps1	chr2	protein_coding	olfactory receptor 364, pseudogene 1
chr2	37080340	37090713	+	37078223	37090713	A5SS	0.5	50	50	ENSMUST00000213969.2	ENSMUSG00000059429.4	Olfr365	chr2	protein_coding	olfactory receptor 365
chr2	37157123	37160522	+	37157123	37160458	A3SS	0.5	50	50	ENSMUST00000213819.2	ENSMUSG00000049094.8	Olfr367-ps	chr2	transcribed_unprocessed_pseudogene	olfactory receptor 367, pseudogene
chr2	37245829;37246278	37246177;37247216	-	37245829	37247216	cassetteExon	0.5	100	100	ENSMUST00000009174.15	ENSMUSG00000009030.15	Pdcl	chr2	protein_coding	phosducin-like
chr2	37247392;37248410	37248364;37249155	-	37247392	37249155	cassetteExon	0.5	100	100	ENSMUST00000009174.15	ENSMUSG00000009030.15	Pdcl	chr2	protein_coding	phosducin-like
chr2	37247392	37249155	-	37247392	37248364	A5SS	0.5	50	50	ENSMUST00000112940.8	ENSMUSG00000009030.15	Pdcl	chr2	protein_coding	phosducin-like
chr2	37304824	37312779	-	37304824;37309479	37309444;37312779	ES	0.5	50	50	ENSMUST00000112934.8	ENSMUSG00000075376.11	Rc3h2	chr2	protein_coding	ring finger and CCCH-type zinc finger domains 2
chr2	37299679;37300125	37300051;37301152	-	37299679	37301152	cassetteExon	0.5	100	100	ENSMUST00000112934.8	ENSMUSG00000075376.11	Rc3h2	chr2	protein_coding	ring finger and CCCH-type zinc finger domains 2
chr2	37265440	37266654	-	37265440	37266673	A5SS	0.5	50	50	ENSMUST00000112934.8	ENSMUSG00000075376.11	Rc3h2	chr2	protein_coding	ring finger and CCCH-type zinc finger domains 2
chr2	37327011	37332699	-	37320991	37332699	A3SS	0.5	50	50	ENSMUST00000112932.2	ENSMUSG00000066798.4	Zbtb6	chr2	protein_coding	zinc finger and BTB domain containing 6
chr2	37327011	37333068	-	37327011	37332699	A5SS	0.5	50	50	ENSMUST00000067043.5	ENSMUSG00000050714.10	Zbtb26	chr2	protein_coding	zinc finger and BTB domain containing 26
chr2	37333468	37359528	+	37333468	37359389	A3SS	0.5	50	50	ENSMUST00000133434.8	ENSMUSG00000035437.16	Rabgap1	chr2	protein_coding	RAB GTPase activating protein 1
chr2	37342313	37359389	+	37333468	37359389	A5SS	0.5	50	50	ENSMUST00000133434.8	ENSMUSG00000035437.16	Rabgap1	chr2	protein_coding	RAB GTPase activating protein 1
chr2	37406711	37422528	+	37399090	37422528	A5SS	0.5	50	50	ENSMUST00000061179.12	ENSMUSG00000035437.16	Rabgap1	chr2	protein_coding	RAB GTPase activating protein 1
chr2	37342313	37359528	+	37333468	37359528	A5SS	0.5	50	50	ENSMUST00000153145.8	ENSMUSG00000035437.16	Rabgap1	chr2	protein_coding	RAB GTPase activating protein 1
chr2	37342313	37359389	+	37342313	37359528	A3SS	0.5	50	50	ENSMUST00000148470.8	ENSMUSG00000035437.16	Rabgap1	chr2	protein_coding	RAB GTPase activating protein 1
chr2	37406711	37407071	+	37406711	37422528	A3SS	0.5	50	50	ENSMUST00000159092.2	ENSMUSG00000035437.16	Rabgap1	chr2	protein_coding	RAB GTPase activating protein 1
chr2	37464932	37470685	-	37375230	37470685	A3SS	0.33	50	50	ENSMUST00000183690.8	ENSMUSG00000026915.17	Strbp	chr2	protein_coding	spermatid perinuclear RNA binding protein
chr2	37469761	37470685	-	37375230	37470685	A3SS	0.33	50	50	ENSMUST00000183690.8	ENSMUSG00000026915.17	Strbp	chr2	protein_coding	spermatid perinuclear RNA binding protein
chr2	37474118	37476522	-	37470818	37476522	A3SS	0.5	50	50	ENSMUST00000183690.8	ENSMUSG00000026915.17	Strbp	chr2	protein_coding	spermatid perinuclear RNA binding protein
chr2	37480792	37483950	-	37480792	37486716	A5SS	0.5	50	50	ENSMUST00000183690.8	ENSMUSG00000026915.17	Strbp	chr2	protein_coding	spermatid perinuclear RNA binding protein
chr2	37469761	37470685	-	37464932	37470685	A3SS	0.5	50	50	ENSMUST00000203861.2	ENSMUSG00000026915.17	Strbp	chr2	protein_coding	spermatid perinuclear RNA binding protein
chr2	37537297	37593679	-	37537297	37593204	5pMXE	0.25	50	50	ENSMUST00000072186.12	ENSMUSG00000026915.17	Strbp	chr2	protein_coding	spermatid perinuclear RNA binding protein
chr2	37537297	37547625	-	37537297	37593204	A5SS	0.25	50	50	ENSMUST00000072186.12	ENSMUSG00000026915.17	Strbp	chr2	protein_coding	spermatid perinuclear RNA binding protein
chr2	37537297	37556365	-	37537297	37593204	A5SS	0.25	50	50	ENSMUST00000072186.12	ENSMUSG00000026915.17	Strbp	chr2	protein_coding	spermatid perinuclear RNA binding protein
chr2	37537297	37556365	-	37537297	37547625	5pMXE	0.25	50	50	ENSMUST00000145808.8	ENSMUSG00000026915.17	Strbp	chr2	protein_coding	spermatid perinuclear RNA binding protein
chr2	37537297	37593679	-	37537297	37547625	5pMXE	0.25	50	50	ENSMUST00000145808.8	ENSMUSG00000026915.17	Strbp	chr2	protein_coding	spermatid perinuclear RNA binding protein
chr2	37537297	37556365	-	37537297	37593679	A5SS	0.25	50	50	ENSMUST00000155237.2	ENSMUSG00000026915.17	Strbp	chr2	protein_coding	spermatid perinuclear RNA binding protein
chr2	37406711	37407071	+	37406457	37407071	A5SS	0.5	50	50	ENSMUST00000159737.2	ENSMUSG00000053164.7	Gpr21	chr2	protein_coding	G protein-coupled receptor 21
chr2	37682231;37682754	37682635;37683111	+	37682231	37683111	cassetteExon	0.5	100	100	ENSMUST00000050372.10	ENSMUSG00000035403.11	Crb2	chr2	protein_coding	crumbs family member 2
chr2	38016660	38049819	-	38016660;38026987	38026938;38049819	ES	0.33	50	50	ENSMUST00000102787.10	ENSMUSG00000035392.18	Dennd1a	chr2	protein_coding	DENN/MADD domain containing 1A
chr2	38026987	38133414	-	38026987;38049862	38049819;38133414	ES	0.33	50	50	ENSMUST00000102787.10	ENSMUSG00000035392.18	Dennd1a	chr2	protein_coding	DENN/MADD domain containing 1A
chr2	37692285;37695212	37695084;37706928	-	37692285	37706928	cassetteExon	0.5	100	100	ENSMUST00000102787.10	ENSMUSG00000035392.18	Dennd1a	chr2	protein_coding	DENN/MADD domain containing 1A
chr2	38049862;38066331	38066240;38133414	-	38049862	38133414	cassetteExon	0.5	100	100	ENSMUST00000102787.10	ENSMUSG00000035392.18	Dennd1a	chr2	protein_coding	DENN/MADD domain containing 1A
chr2	38049862	38056062	-	38049862	38133414	A5SS	0.33	50	50	ENSMUST00000102787.10	ENSMUSG00000035392.18	Dennd1a	chr2	protein_coding	DENN/MADD domain containing 1A
chr2	37851754;38049862	38049819;38133414	-	37851754;38026987	37873072;38133414	MXE	0.5	100	100	ENSMUST00000140552.8	ENSMUSG00000035392.18	Dennd1a	chr2	protein_coding	DENN/MADD domain containing 1A
chr2	38016660;38049862	38049819;38133414	-	38016660;38026987	38026938;38133414	MXE	0.5	100	100	ENSMUST00000140552.8	ENSMUSG00000035392.18	Dennd1a	chr2	protein_coding	DENN/MADD domain containing 1A
chr2	38066331	38133414	-	38026987	38133414	A3SS	0.33	50	50	ENSMUST00000140552.8	ENSMUSG00000035392.18	Dennd1a	chr2	protein_coding	DENN/MADD domain containing 1A
chr2	37938806	38016541	-	37911478	38016541	A3SS	0.5	50	50	ENSMUST00000150896.8	ENSMUSG00000035392.18	Dennd1a	chr2	protein_coding	DENN/MADD domain containing 1A
chr2	37911478	37929164	-	37911478	38016541	A5SS	0.5	50	50	ENSMUST00000150896.8	ENSMUSG00000035392.18	Dennd1a	chr2	protein_coding	DENN/MADD domain containing 1A
chr2	38016660	38049819	-	37851754	38049819	A3SS	0.33	50	50	ENSMUST00000130472.8	ENSMUSG00000035392.18	Dennd1a	chr2	protein_coding	DENN/MADD domain containing 1A
chr2	38026987	38049819	-	37851754	38049819	A3SS	0.33	50	50	ENSMUST00000130472.8	ENSMUSG00000035392.18	Dennd1a	chr2	protein_coding	DENN/MADD domain containing 1A
chr2	38026987	38133414	-	38049862	38133414	A3SS&ES	0.33	50	50	ENSMUST00000130472.8	ENSMUSG00000035392.18	Dennd1a	chr2	protein_coding	DENN/MADD domain containing 1A
chr2	37851754	37873072	-	37851754	38049819	A5SS	0.5	50	50	ENSMUST00000130472.8	ENSMUSG00000035392.18	Dennd1a	chr2	protein_coding	DENN/MADD domain containing 1A
chr2	38049862	38066240	-	38049862	38056062	5pMXE	0.33	50	50	ENSMUST00000126889.8	ENSMUSG00000035392.18	Dennd1a	chr2	protein_coding	DENN/MADD domain containing 1A
chr2	38231177	38243323	+	38229817	38243323	A5SS	0.2	50	50	ENSMUST00000143783.9	ENSMUSG00000000247.12	Lhx2	chr2	protein_coding	LIM homeobox protein 2
chr2	38241905	38243323	+	38229817	38243323	A5SS	0.2	50	50	ENSMUST00000143783.9	ENSMUSG00000000247.12	Lhx2	chr2	protein_coding	LIM homeobox protein 2
chr2	38241985	38243323	+	38229817	38243323	A5SS	0.2	50	50	ENSMUST00000143783.9	ENSMUSG00000000247.12	Lhx2	chr2	protein_coding	LIM homeobox protein 2
chr2	38242590	38243323	+	38229817	38243323	A5SS	0.2	50	50	ENSMUST00000143783.9	ENSMUSG00000000247.12	Lhx2	chr2	protein_coding	LIM homeobox protein 2
chr2	38241905	38243323	+	38231177	38243323	A5SS	0.2	50	50	ENSMUST00000133661.8	ENSMUSG00000000247.12	Lhx2	chr2	protein_coding	LIM homeobox protein 2
chr2	38241985	38243323	+	38231177	38243323	A5SS	0.2	50	50	ENSMUST00000133661.8	ENSMUSG00000000247.12	Lhx2	chr2	protein_coding	LIM homeobox protein 2
chr2	38242590	38243323	+	38231177	38243323	A5SS	0.2	50	50	ENSMUST00000133661.8	ENSMUSG00000000247.12	Lhx2	chr2	protein_coding	LIM homeobox protein 2
chr2	38241985	38243323	+	38241905	38243323	A5SS	0.2	50	50	ENSMUST00000000253.6	ENSMUSG00000000247.12	Lhx2	chr2	protein_coding	LIM homeobox protein 2
chr2	38242590	38243323	+	38241905	38243323	A5SS	0.2	50	50	ENSMUST00000000253.6	ENSMUSG00000000247.12	Lhx2	chr2	protein_coding	LIM homeobox protein 2
chr2	38242590	38243323	+	38241985	38243323	A5SS	0.2	50	50	ENSMUST00000176229.2	ENSMUSG00000000247.12	Lhx2	chr2	protein_coding	LIM homeobox protein 2
chr2	38440683	38447868	+	38440683	38447828	A3SS	0.5	50	50	ENSMUST00000054234.10	ENSMUSG00000026749.12	Nek6	chr2	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 6
chr2	38401991	38440565	+	38401805	38440565	A5SS	0.25	50	50	ENSMUST00000054234.10	ENSMUSG00000026749.12	Nek6	chr2	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 6
chr2	38404670	38440565	+	38401805	38440565	A5SS	0.25	50	50	ENSMUST00000054234.10	ENSMUSG00000026749.12	Nek6	chr2	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 6
chr2	38404876	38440565	+	38401805	38440565	A5SS	0.25	50	50	ENSMUST00000054234.10	ENSMUSG00000026749.12	Nek6	chr2	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 6
chr2	38404670	38440565	+	38401991	38440565	A5SS	0.25	50	50	ENSMUST00000112895.8	ENSMUSG00000026749.12	Nek6	chr2	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 6
chr2	38404876	38440565	+	38401991	38440565	A5SS	0.25	50	50	ENSMUST00000112895.8	ENSMUSG00000026749.12	Nek6	chr2	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 6
chr2	38404670	38440565	+	38404670;38404876	38404745;38440565	ES	0.5	50	50	ENSMUST00000151683.8	ENSMUSG00000026749.12	Nek6	chr2	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 6
chr2	38563469	38565734	+	38563469;38564004	38563724;38565734	ES	0.33	50	50	ENSMUST00000239173.2	ENSMUSG00000083722.3	Adgrd2-ps	chr2	transcribed_unitary_pseudogene	adhesion G protein-coupled receptor D2, pseudogene
chr2	38571942	38572555	+	38571942;38572474	38572342;38572555	ES	0.33	50	50	ENSMUST00000239173.2	ENSMUSG00000083722.3	Adgrd2-ps	chr2	transcribed_unitary_pseudogene	adhesion G protein-coupled receptor D2, pseudogene
chr2	38567190;38569556	38569501;38570269	+	38567190	38570269	cassetteExon	0.5	100	100	ENSMUST00000239173.2	ENSMUSG00000083722.3	Adgrd2-ps	chr2	transcribed_unitary_pseudogene	adhesion G protein-coupled receptor D2, pseudogene
chr2	38567190;38569556	38569501;38571461	+	38567190;38571248	38570269;38571461	MXE	0.5	100	100	ENSMUST00000239173.2	ENSMUSG00000083722.3	Adgrd2-ps	chr2	transcribed_unitary_pseudogene	adhesion G protein-coupled receptor D2, pseudogene
chr2	38564004	38564937	+	38564004	38565734	A3SS	0.5	50	50	ENSMUST00000239173.2	ENSMUSG00000083722.3	Adgrd2-ps	chr2	transcribed_unitary_pseudogene	adhesion G protein-coupled receptor D2, pseudogene
chr2	38562420	38563385	+	38563066	38563385	A5SS&ES	0.5	50	50	ENSMUST00000239173.2	ENSMUSG00000083722.3	Adgrd2-ps	chr2	transcribed_unitary_pseudogene	adhesion G protein-coupled receptor D2, pseudogene
chr2	38572470	38572555	+	38572474	38572555	A5SS	0.33	50	50	ENSMUST00000239173.2	ENSMUSG00000083722.3	Adgrd2-ps	chr2	transcribed_unitary_pseudogene	adhesion G protein-coupled receptor D2, pseudogene
chr2	38577669	38578503	+	38577685	38578503	A5SS	0.5	50	50	ENSMUST00000239173.2	ENSMUSG00000083722.3	Adgrd2-ps	chr2	transcribed_unitary_pseudogene	adhesion G protein-coupled receptor D2, pseudogene
chr2	38571942	38572555	+	38571942;38572470	38572342;38572555	ES	0.33	50	50	ENSMUST00000118797.3	ENSMUSG00000083722.3	Adgrd2-ps	chr2	transcribed_unitary_pseudogene	adhesion G protein-coupled receptor D2, pseudogene
chr2	38562650	38565734	+	38562650	38562968	A3SS&ES	0.5	50	50	ENSMUST00000118797.3	ENSMUSG00000083722.3	Adgrd2-ps	chr2	transcribed_unitary_pseudogene	adhesion G protein-coupled receptor D2, pseudogene
chr2	38563469	38565734	+	38563469	38563724	A3SS&ES	0.5	50	50	ENSMUST00000118797.3	ENSMUSG00000083722.3	Adgrd2-ps	chr2	transcribed_unitary_pseudogene	adhesion G protein-coupled receptor D2, pseudogene
chr2	38567190	38570269	+	38567190	38569501	A3SS&ES	0.5	50	50	ENSMUST00000239315.2	ENSMUSG00000083722.3	Adgrd2-ps	chr2	transcribed_unitary_pseudogene	adhesion G protein-coupled receptor D2, pseudogene
chr2	38569556	38570269	+	38569556	38571461	A3SS	0.5	50	50	ENSMUST00000239315.2	ENSMUSG00000083722.3	Adgrd2-ps	chr2	transcribed_unitary_pseudogene	adhesion G protein-coupled receptor D2, pseudogene
chr2	38572670	38573471	+	38572670	38573593	A3SS	0.5	50	50	ENSMUST00000239315.2	ENSMUSG00000083722.3	Adgrd2-ps	chr2	transcribed_unitary_pseudogene	adhesion G protein-coupled receptor D2, pseudogene
chr2	38562650	38565734	+	38563469	38565734	A5SS&ES	0.33	50	50	ENSMUST00000239315.2	ENSMUSG00000083722.3	Adgrd2-ps	chr2	transcribed_unitary_pseudogene	adhesion G protein-coupled receptor D2, pseudogene
chr2	38571248	38571461	+	38569556	38571461	A5SS	0.5	50	50	ENSMUST00000239315.2	ENSMUSG00000083722.3	Adgrd2-ps	chr2	transcribed_unitary_pseudogene	adhesion G protein-coupled receptor D2, pseudogene
chr2	38564004	38565734	+	38562650	38565734	A5SS	0.33	50	50	ENSMUST00000152645.2	ENSMUSG00000083722.3	Adgrd2-ps	chr2	transcribed_unitary_pseudogene	adhesion G protein-coupled receptor D2, pseudogene
chr2	38600784	38604369	-	38600784	38602018	5pMXE	0.5	50	50	ENSMUST00000112883.8	ENSMUSG00000026751.15	Nr5a1	chr2	protein_coding	nuclear receptor subfamily 5, group A, member 1
chr2	38650441	38775208	-	38650441;38762651	38762607;38775208	ES	0.5	50	50	ENSMUST00000112877.8	ENSMUSG00000063972.14	Nr6a1	chr2	protein_coding	nuclear receptor subfamily 6, group A, member 1
chr2	38627910	38628899	-	38621179	38628899	A3SS	0.5	50	50	ENSMUST00000112877.8	ENSMUSG00000063972.14	Nr6a1	chr2	protein_coding	nuclear receptor subfamily 6, group A, member 1
chr2	38650441	38674405	-	38650441	38762607	A5SS	0.25	50	50	ENSMUST00000112877.8	ENSMUSG00000063972.14	Nr6a1	chr2	protein_coding	nuclear receptor subfamily 6, group A, member 1
chr2	38650441	38675087	-	38650441	38762607	A5SS	0.25	50	50	ENSMUST00000112877.8	ENSMUSG00000063972.14	Nr6a1	chr2	protein_coding	nuclear receptor subfamily 6, group A, member 1
chr2	38650441	38675087	-	38650441	38674405	5pMXE	0.25	50	50	ENSMUST00000168098.8	ENSMUSG00000063972.14	Nr6a1	chr2	protein_coding	nuclear receptor subfamily 6, group A, member 1
chr2	38650441	38775208	-	38650441	38674405	5pMXE	0.25	50	50	ENSMUST00000168098.8	ENSMUSG00000063972.14	Nr6a1	chr2	protein_coding	nuclear receptor subfamily 6, group A, member 1
chr2	38672092	38674405	-	38650441	38674405	A3SS	0.5	50	50	ENSMUST00000168098.8	ENSMUSG00000063972.14	Nr6a1	chr2	protein_coding	nuclear receptor subfamily 6, group A, member 1
chr2	38650441	38775208	-	38650441	38675087	5pMXE	0.25	50	50	ENSMUST00000132636.8	ENSMUSG00000063972.14	Nr6a1	chr2	protein_coding	nuclear receptor subfamily 6, group A, member 1
chr2	38888488	38889985	+	38888488;38889415	38889295;38889985	ES	0.5	50	50	ENSMUST00000039535.9	ENSMUSG00000035295.11	Wdr38	chr2	protein_coding	WD repeat domain 38
chr2	38898336	38903129	+	38895421	38903129	A5SS	0.5	50	50	ENSMUST00000141467.8	ENSMUSG00000026755.15	Arpc5l	chr2	protein_coding	actin related protein 2/3 complex, subunit 5-like
chr2	38898336	38903735	+	38903199	38903735	A5SS&ES	0.5	50	50	ENSMUST00000141467.8	ENSMUSG00000026755.15	Arpc5l	chr2	protein_coding	actin related protein 2/3 complex, subunit 5-like
chr2	38898336;38903199	38903129;38903735	+	38898336	38903735	cassetteExon	0.5	100	100	ENSMUST00000204825.3	ENSMUSG00000026755.15	Arpc5l	chr2	protein_coding	actin related protein 2/3 complex, subunit 5-like
chr2	38937778	38940171	-	38937778;38938450	38938322;38940171	ES	0.5	50	50	ENSMUST00000039165.15	ENSMUSG00000026754.17	Golga1	chr2	protein_coding	golgi autoantigen, golgin subfamily a, 1
chr2	38942113	38946072	-	38942113;38943042	38942968;38946072	ES	0.5	50	50	ENSMUST00000039165.15	ENSMUSG00000026754.17	Golga1	chr2	protein_coding	golgi autoantigen, golgin subfamily a, 1
chr2	38931364	38937598	-	38931364	38937035	A5SS&ES	0.5	50	50	ENSMUST00000039165.15	ENSMUSG00000026754.17	Golga1	chr2	protein_coding	golgi autoantigen, golgin subfamily a, 1
chr2	38954735	38955437	-	38954735	38955393	A5SS	0.5	50	50	ENSMUST00000039165.15	ENSMUSG00000026754.17	Golga1	chr2	protein_coding	golgi autoantigen, golgin subfamily a, 1
chr2	38942113	38946072	-	38942113	38942968	5pMXE	0.5	50	50	ENSMUST00000153914.8	ENSMUSG00000026754.17	Golga1	chr2	protein_coding	golgi autoantigen, golgin subfamily a, 1
chr2	38907893	38908351	-	38907926	38908351	A3SS	0.5	50	50	ENSMUST00000124463.2	ENSMUSG00000026754.17	Golga1	chr2	protein_coding	golgi autoantigen, golgin subfamily a, 1
chr2	38992411	38993676	-	38992411;38993316	38993215;38993676	ES	0.5	50	50	ENSMUST00000038874.12	ENSMUSG00000035236.18	Scai	chr2	protein_coding	suppressor of cancer cell invasion
chr2	38970559;38972864	38972722;38973550	-	38970559	38973550	cassetteExon	0.5	100	100	ENSMUST00000038874.12	ENSMUSG00000035236.18	Scai	chr2	protein_coding	suppressor of cancer cell invasion
chr2	39023098;39040426	39040326;39080001	-	39023098	39080001	cassetteExon	0.5	100	100	ENSMUST00000038874.12	ENSMUSG00000035236.18	Scai	chr2	protein_coding	suppressor of cancer cell invasion
chr2	38970477	38973550	-	38970559	38973550	A3SS	0.33	50	50	ENSMUST00000038874.12	ENSMUSG00000035236.18	Scai	chr2	protein_coding	suppressor of cancer cell invasion
chr2	38991952	38992333	-	38989487	38992333	A3SS	0.5	50	50	ENSMUST00000038874.12	ENSMUSG00000035236.18	Scai	chr2	protein_coding	suppressor of cancer cell invasion
chr2	39023098	39079925	-	39023098	39080001	A5SS	0.33	50	50	ENSMUST00000038874.12	ENSMUSG00000035236.18	Scai	chr2	protein_coding	suppressor of cancer cell invasion
chr2	39023098	39079925	-	39023098	39040326	A5SS&ES	0.33	50	50	ENSMUST00000204404.3	ENSMUSG00000035236.18	Scai	chr2	protein_coding	suppressor of cancer cell invasion
chr2	38972864	38973550	-	38970477	38973550	A3SS	0.33	50	50	ENSMUST00000204093.3	ENSMUSG00000035236.18	Scai	chr2	protein_coding	suppressor of cancer cell invasion
chr2	39094986	39100970	-	39094986;39096729	39096664;39100970	ES	0.33	50	50	ENSMUST00000028087.6	ENSMUSG00000026753.6	Ppp6c	chr2	protein_coding	protein phosphatase 6, catalytic subunit
chr2	39090133	39090899	-	39090133	39094845	A5SS	0.33	50	50	ENSMUST00000028087.6	ENSMUSG00000026753.6	Ppp6c	chr2	protein_coding	protein phosphatase 6, catalytic subunit
chr2	39101065	39115820	-	39101065	39116179	A5SS	0.5	50	50	ENSMUST00000028087.6	ENSMUSG00000026753.6	Ppp6c	chr2	protein_coding	protein phosphatase 6, catalytic subunit
chr2	39090133;39094986	39094845;39100970	-	39090133	39100970	cassetteExon	0.5	100	100	ENSMUST00000204257.3	ENSMUSG00000026753.6	Ppp6c	chr2	protein_coding	protein phosphatase 6, catalytic subunit
chr2	39096729	39100970	-	39090133	39100970	A3SS	0.33	50	50	ENSMUST00000204257.3	ENSMUSG00000026753.6	Ppp6c	chr2	protein_coding	protein phosphatase 6, catalytic subunit
chr2	39090133	39090899	-	39090133	39100970	A5SS	0.33	50	50	ENSMUST00000204257.3	ENSMUSG00000026753.6	Ppp6c	chr2	protein_coding	protein phosphatase 6, catalytic subunit
chr2	40501520	40517329	-	40501520	40505108	5pMXE	0.25	50	50	ENSMUST00000129974.3	ENSMUSG00000049252.18	Lrp1b	chr2	protein_coding	low density lipoprotein-related protein 1B
chr2	40501520	40518650	-	40501520	40505108	5pMXE	0.25	50	50	ENSMUST00000129974.3	ENSMUSG00000049252.18	Lrp1b	chr2	protein_coding	low density lipoprotein-related protein 1B
chr2	40501520	40519619	-	40501520	40505108	5pMXE	0.25	50	50	ENSMUST00000129974.3	ENSMUSG00000049252.18	Lrp1b	chr2	protein_coding	low density lipoprotein-related protein 1B
chr2	40487086;40488523	40488425;40490266	-	40487086	40490266	cassetteExon	0.5	100	100	ENSMUST00000129974.3	ENSMUSG00000049252.18	Lrp1b	chr2	protein_coding	low density lipoprotein-related protein 1B
chr2	40501520;40518763	40518650;40519619	-	40501520	40519619	cassetteExon	0.5	100	100	ENSMUST00000052550.13	ENSMUSG00000049252.18	Lrp1b	chr2	protein_coding	low density lipoprotein-related protein 1B
chr2	40587530	40589524	-	40587603	40589524	A3SS	0.5	50	50	ENSMUST00000052550.13	ENSMUSG00000049252.18	Lrp1b	chr2	protein_coding	low density lipoprotein-related protein 1B
chr2	41944613	42213606	-	41850790	42213606	A3SS	0.33	50	50	ENSMUST00000052550.13	ENSMUSG00000049252.18	Lrp1b	chr2	protein_coding	low density lipoprotein-related protein 1B
chr2	42542519	42542747	-	42213728	42542747	A3SS	0.5	50	50	ENSMUST00000052550.13	ENSMUSG00000049252.18	Lrp1b	chr2	protein_coding	low density lipoprotein-related protein 1B
chr2	40501520	40517329	-	40501520	40519619	A5SS	0.25	50	50	ENSMUST00000052550.13	ENSMUSG00000049252.18	Lrp1b	chr2	protein_coding	low density lipoprotein-related protein 1B
chr2	40501520	40518650	-	40501520	40517329	5pMXE	0.25	50	50	ENSMUST00000185258.4	ENSMUSG00000049252.18	Lrp1b	chr2	protein_coding	low density lipoprotein-related protein 1B
chr2	41850790	42213606	-	41325645	42213606	A3SS	0.33	50	50	ENSMUST00000203080.3	ENSMUSG00000049252.18	Lrp1b	chr2	protein_coding	low density lipoprotein-related protein 1B
chr2	41944613	42213606	-	41325645	42213606	A3SS	0.33	50	50	ENSMUST00000203080.3	ENSMUSG00000049252.18	Lrp1b	chr2	protein_coding	low density lipoprotein-related protein 1B
chr2	41325645	41335113	-	41325645	42213606	A5SS	0.5	50	50	ENSMUST00000203080.3	ENSMUSG00000049252.18	Lrp1b	chr2	protein_coding	low density lipoprotein-related protein 1B
chr2	43489654	43492255	+	43489654;43490808	43490737;43492255	ES	0.5	50	50	ENSMUST00000028223.9	ENSMUSG00000026866.17	Kynu	chr2	protein_coding	kynureninase
chr2	43494300	43495623	+	43494300	43518965	A3SS	0.5	50	50	ENSMUST00000028223.9	ENSMUSG00000026866.17	Kynu	chr2	protein_coding	kynureninase
chr2	43521631	43524964	+	43521631	43561371	A3SS	0.5	50	50	ENSMUST00000028223.9	ENSMUSG00000026866.17	Kynu	chr2	protein_coding	kynureninase
chr2	43734823;43735844	43735767;43746818	+	43734823	43746818	cassetteExon	0.5	100	100	ENSMUST00000112824.8	ENSMUSG00000049744.16	Arhgap15	chr2	protein_coding	Rho GTPase activating protein 15
chr2	44212793	44276313	+	44212793	44278364	A3SS	0.5	50	50	ENSMUST00000112824.8	ENSMUSG00000049744.16	Arhgap15	chr2	protein_coding	Rho GTPase activating protein 15
chr2	44750338	44752114	-	44750338	44751498	5pMXE	0.25	50	50	ENSMUST00000112810.8	ENSMUSG00000036890.14	Gtdc1	chr2	protein_coding	glycosyltransferase-like domain containing 1
chr2	44750338	44817154	-	44750338	44751498	5pMXE	0.25	50	50	ENSMUST00000112810.8	ENSMUSG00000036890.14	Gtdc1	chr2	protein_coding	glycosyltransferase-like domain containing 1
chr2	44750338	44817617	-	44750338	44751498	5pMXE	0.25	50	50	ENSMUST00000112810.8	ENSMUSG00000036890.14	Gtdc1	chr2	protein_coding	glycosyltransferase-like domain containing 1
chr2	44679055	44715363	-	44646447	44715363	A3SS	0.25	50	50	ENSMUST00000112810.8	ENSMUSG00000036890.14	Gtdc1	chr2	protein_coding	glycosyltransferase-like domain containing 1
chr2	44681613	44715363	-	44646447	44715363	A3SS	0.25	50	50	ENSMUST00000112810.8	ENSMUSG00000036890.14	Gtdc1	chr2	protein_coding	glycosyltransferase-like domain containing 1
chr2	44750338	44817617	-	44750338	44817154	5pMXE	0.25	50	50	ENSMUST00000130991.8	ENSMUSG00000036890.14	Gtdc1	chr2	protein_coding	glycosyltransferase-like domain containing 1
chr2	44482002;44646447	44646280;44715363	-	44482002;44525328	44525014;44715363	MXE	0.5	100	100	ENSMUST00000130991.8	ENSMUSG00000036890.14	Gtdc1	chr2	protein_coding	glycosyltransferase-like domain containing 1
chr2	44679055	44715363	-	44525328	44715363	A3SS	0.25	50	50	ENSMUST00000130991.8	ENSMUSG00000036890.14	Gtdc1	chr2	protein_coding	glycosyltransferase-like domain containing 1
chr2	44681613	44715363	-	44525328	44715363	A3SS	0.25	50	50	ENSMUST00000130991.8	ENSMUSG00000036890.14	Gtdc1	chr2	protein_coding	glycosyltransferase-like domain containing 1
chr2	44525328	44642059	-	44525328	44715363	A5SS	0.5	50	50	ENSMUST00000130991.8	ENSMUSG00000036890.14	Gtdc1	chr2	protein_coding	glycosyltransferase-like domain containing 1
chr2	44750338	44752114	-	44750338	44817154	A5SS	0.25	50	50	ENSMUST00000130991.8	ENSMUSG00000036890.14	Gtdc1	chr2	protein_coding	glycosyltransferase-like domain containing 1
chr2	44750338	44817617	-	44750338	44752114	5pMXE	0.25	50	50	ENSMUST00000146694.8	ENSMUSG00000036890.14	Gtdc1	chr2	protein_coding	glycosyltransferase-like domain containing 1
chr2	44642232	44646280	-	44482002	44646280	A3SS	0.5	50	50	ENSMUST00000146694.8	ENSMUSG00000036890.14	Gtdc1	chr2	protein_coding	glycosyltransferase-like domain containing 1
chr2	44525328	44715363	-	44646447	44715363	3pMXE	0.25	50	50	ENSMUST00000154744.8	ENSMUSG00000036890.14	Gtdc1	chr2	protein_coding	glycosyltransferase-like domain containing 1
chr2	44681613	44715363	-	44679055	44715363	A3SS	0.5	50	50	ENSMUST00000100127.9	ENSMUSG00000036890.14	Gtdc1	chr2	protein_coding	glycosyltransferase-like domain containing 1
chr2	44891826	44907409	-	44891826;44892716	44892528;44907409	ES	0.33	50	50	ENSMUST00000176438.9	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	44892716	44912859	-	44892716;44907480	44907409;44912859	ES	0.25	50	50	ENSMUST00000176438.9	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	45000169;45001182	45001032;45002835	-	45000169	45002835	cassetteExon	0.5	100	100	ENSMUST00000176438.9	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	44878007	44888896	-	44888007	44888896	A3SS&ES	0.5	50	50	ENSMUST00000176438.9	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	44898698	44907409	-	44892716	44907409	A3SS	0.33	50	50	ENSMUST00000176438.9	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	44907477	44912859	-	44907480	44912859	A3SS	0.25	50	50	ENSMUST00000176438.9	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	44987209	45000028	-	44913116	45000028	A3SS	0.25	50	50	ENSMUST00000176438.9	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	44995585	45000028	-	44913116	45000028	A3SS	0.25	50	50	ENSMUST00000176438.9	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	44996502	45000028	-	44913116	45000028	A3SS	0.25	50	50	ENSMUST00000176438.9	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	45006713	45007212	-	45003104	45007212	A3SS	0.5	50	50	ENSMUST00000176438.9	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	44913116	44913649	-	44913116	45000028	A5SS	0.33	50	50	ENSMUST00000176438.9	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	44913116	44944155	-	44913116	45000028	A5SS	0.33	50	50	ENSMUST00000176438.9	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	45000169	45000360	-	45000169	45002835	A5SS	0.14	50	50	ENSMUST00000176438.9	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	45000169	45000405	-	45000169	45002835	A5SS	0.14	50	50	ENSMUST00000176438.9	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	45000169	45000433	-	45000169	45002835	A5SS	0.14	50	50	ENSMUST00000176438.9	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	45000169	45000492	-	45000169	45002835	A5SS	0.14	50	50	ENSMUST00000176438.9	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	45000169	45003248	-	45000169	45002835	A5SS&ES	0.14	50	50	ENSMUST00000176438.9	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	45003104	45003248	-	45003104	45007212	A5SS	0.33	50	50	ENSMUST00000176438.9	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	45003104	45003428	-	45003104	45007212	A5SS	0.33	50	50	ENSMUST00000176438.9	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	44891826;44892716	44892528;44912859	-	44891826	44912859	cassetteExon	0.5	100	100	ENSMUST00000176732.8	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	44891826;44907477	44907409;44912859	-	44891826	44912859	cassetteExon	0.5	100	100	ENSMUST00000176732.8	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	44891826;44907480	44907409;44912859	-	44891826	44912859	cassetteExon	0.5	100	100	ENSMUST00000176732.8	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	45000169	45001032	-	45000169	45000360	5pMXE	0.14	50	50	ENSMUST00000028229.13	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	45000169	45003248	-	45000169	45000360	5pMXE	0.14	50	50	ENSMUST00000028229.13	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	45000169	45000405	-	45000169	45000360	A5SS	0.14	50	50	ENSMUST00000028229.13	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	45000169	45000433	-	45000169	45000360	A5SS	0.14	50	50	ENSMUST00000028229.13	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	45000169	45000492	-	45000169	45000360	A5SS	0.14	50	50	ENSMUST00000028229.13	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	44891826;44907477	44907409;44912859	-	44891826;44892716	44892528;44912859	MXE	0.5	100	100	ENSMUST00000200844.4	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	44892716;44907477	44907409;44912859	-	44892716	44912859	cassetteExon	0.5	100	100	ENSMUST00000200844.4	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	44891826;44907480	44907409;44912859	-	44891826;44892716	44892528;44912859	MXE	0.5	100	100	ENSMUST00000200844.4	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	45000169	45000492	-	45000169	45000405	5pMXE	0.14	50	50	ENSMUST00000201804.4	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	45000169	45001032	-	45000169	45000405	5pMXE	0.14	50	50	ENSMUST00000201804.4	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	45000169	45003248	-	45000169	45000405	5pMXE	0.14	50	50	ENSMUST00000201804.4	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	45000169	45000433	-	45000169	45000405	A5SS	0.14	50	50	ENSMUST00000201804.4	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	45000169	45002835	-	45000169	45001032	5pMXE	0.14	50	50	ENSMUST00000201623.4	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	45000169	45003248	-	45000169	45001032	5pMXE	0.14	50	50	ENSMUST00000201623.4	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	45000169	45000433	-	45000169	45001032	A5SS	0.14	50	50	ENSMUST00000201623.4	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	45000169	45000492	-	45000169	45001032	A5SS	0.14	50	50	ENSMUST00000201623.4	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	44898698	44907409	-	44891826	44907409	A3SS	0.33	50	50	ENSMUST00000202432.4	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	44913116	44944155	-	44913116	44913649	5pMXE	0.33	50	50	ENSMUST00000209076.2	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	44891826	44907409	-	44892716	44907409	3pMXE	0.33	50	50	ENSMUST00000201413.4	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	44891826	44912859	-	44907480	44912859	3pMXE	0.25	50	50	ENSMUST00000202935.4	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	44892716	44912859	-	44907480	44912859	3pMXE	0.25	50	50	ENSMUST00000202935.4	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	45000169;45003104	45002835;45003248	-	45000169	45003248	cassetteExon	0.5	100	100	ENSMUST00000202935.4	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	45000169	45000433	-	45000169	45003248	A5SS	0.14	50	50	ENSMUST00000202935.4	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	45000169	45000492	-	45000169	45003248	A5SS	0.14	50	50	ENSMUST00000202935.4	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	45000169	45000492	-	45000169	45000433	A5SS	0.14	50	50	ENSMUST00000202187.4	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	45003104	45003428	-	45003104	45003248	5pMXE	0.33	50	50	ENSMUST00000127520.8	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	44995585	45000028	-	44987209	45000028	A3SS	0.25	50	50	ENSMUST00000153561.6	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	44996502	45000028	-	44987209	45000028	A3SS	0.25	50	50	ENSMUST00000153561.6	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	44995585	45000028	-	44996502	45000028	A3SS	0.25	50	50	ENSMUST00000152232.8	ENSMUSG00000026872.19	Zeb2	chr2	protein_coding	zinc finger E-box binding homeobox 2
chr2	45001314	45003111	+	45001314;45003005	45002855;45003111	ES	0.5	50	50	ENSMUST00000127150.9	ENSMUSG00000052248.18	Zeb2os	chr2	lncRNA	zinc finger E-box binding homeobox 2, opposite strand
chr2	45002354	45002855	+	45001314	45002855	A5SS	0.33	50	50	ENSMUST00000127150.9	ENSMUSG00000052248.18	Zeb2os	chr2	lncRNA	zinc finger E-box binding homeobox 2, opposite strand
chr2	45002560	45002855	+	45001314	45002855	A5SS	0.33	50	50	ENSMUST00000127150.9	ENSMUSG00000052248.18	Zeb2os	chr2	lncRNA	zinc finger E-box binding homeobox 2, opposite strand
chr2	45002560	45002855	+	45002354	45002855	A5SS	0.33	50	50	ENSMUST00000130827.2	ENSMUSG00000052248.18	Zeb2os	chr2	lncRNA	zinc finger E-box binding homeobox 2, opposite strand
chr2	45001314	45003111	+	45003005	45003111	5pMXE	0.5	50	50	ENSMUST00000231441.2	ENSMUSG00000052248.18	Zeb2os	chr2	lncRNA	zinc finger E-box binding homeobox 2, opposite strand
chr2	48787122	48789606	+	48787122;48788620	48788490;48789606	ES	0.5	50	50	ENSMUST00000063886.4	ENSMUSG00000052155.6	Acvr2a	chr2	protein_coding	activin receptor IIA
chr2	48830412	48839970	-	48830412	48839129	5pMXE	0.25	50	50	ENSMUST00000028098.11	ENSMUSG00000026761.13	Orc4	chr2	protein_coding	origin recognition complex, subunit 4
chr2	48830412	48840130	-	48830412	48839129	5pMXE	0.25	50	50	ENSMUST00000028098.11	ENSMUSG00000026761.13	Orc4	chr2	protein_coding	origin recognition complex, subunit 4
chr2	48800254	48802574	-	48800306	48802574	A3SS	0.33	50	50	ENSMUST00000028098.11	ENSMUSG00000026761.13	Orc4	chr2	protein_coding	origin recognition complex, subunit 4
chr2	48800257	48802574	-	48800306	48802574	A3SS	0.33	50	50	ENSMUST00000028098.11	ENSMUSG00000026761.13	Orc4	chr2	protein_coding	origin recognition complex, subunit 4
chr2	48822609	48823092	-	48819741	48823092	A3SS	0.5	50	50	ENSMUST00000028098.11	ENSMUSG00000026761.13	Orc4	chr2	protein_coding	origin recognition complex, subunit 4
chr2	48799526	48800001	-	48799526	48800198	A5SS	0.5	50	50	ENSMUST00000028098.11	ENSMUSG00000026761.13	Orc4	chr2	protein_coding	origin recognition complex, subunit 4
chr2	48830412	48839106	-	48830412	48839129	A5SS	0.25	50	50	ENSMUST00000028098.11	ENSMUSG00000026761.13	Orc4	chr2	protein_coding	origin recognition complex, subunit 4
chr2	48800257	48802574	-	48800254	48802574	A3SS	0.33	50	50	ENSMUST00000154784.8	ENSMUSG00000026761.13	Orc4	chr2	protein_coding	origin recognition complex, subunit 4
chr2	48830412	48840130	-	48830412	48839970	5pMXE	0.25	50	50	ENSMUST00000142851.8	ENSMUSG00000026761.13	Orc4	chr2	protein_coding	origin recognition complex, subunit 4
chr2	48830412	48839106	-	48830412	48839970	A5SS	0.25	50	50	ENSMUST00000142851.8	ENSMUSG00000026761.13	Orc4	chr2	protein_coding	origin recognition complex, subunit 4
chr2	48830412	48840130	-	48830412	48839106	5pMXE	0.25	50	50	ENSMUST00000149679.8	ENSMUSG00000026761.13	Orc4	chr2	protein_coding	origin recognition complex, subunit 4
chr2	48908337	48989729	+	48908337;48976664	48976602;48989729	ES	0.33	50	50	ENSMUST00000112745.8	ENSMUSG00000036792.13	Mbd5	chr2	protein_coding	methyl-CpG binding domain protein 5
chr2	49060025	49135554	+	49060025;49121860	49121684;49135554	ES	0.5	50	50	ENSMUST00000112745.8	ENSMUSG00000036792.13	Mbd5	chr2	protein_coding	methyl-CpG binding domain protein 5
chr2	49141435	49162053	+	49141435	49146189	3pMXE	0.5	50	50	ENSMUST00000112745.8	ENSMUSG00000036792.13	Mbd5	chr2	protein_coding	methyl-CpG binding domain protein 5
chr2	48839561;48840187	48840151;48908266	+	48839561	48908266	cassetteExon	0.5	100	100	ENSMUST00000112745.8	ENSMUSG00000036792.13	Mbd5	chr2	protein_coding	methyl-CpG binding domain protein 5
chr2	48839561;48840187	48840151;48989729	+	48839561;48976664	48908266;48989729	MXE	0.5	100	100	ENSMUST00000112745.8	ENSMUSG00000036792.13	Mbd5	chr2	protein_coding	methyl-CpG binding domain protein 5
chr2	48908337	48954717	+	48908337	48976602	A3SS	0.33	50	50	ENSMUST00000112745.8	ENSMUSG00000036792.13	Mbd5	chr2	protein_coding	methyl-CpG binding domain protein 5
chr2	49141435	49162053	+	49141435;49148324	49146189;49162053	ES	0.5	50	50	ENSMUST00000112754.8	ENSMUSG00000036792.13	Mbd5	chr2	protein_coding	methyl-CpG binding domain protein 5
chr2	49164786	49188668	+	49164786;49169795	49168593;49188668	ES	0.33	50	50	ENSMUST00000112754.8	ENSMUSG00000036792.13	Mbd5	chr2	protein_coding	methyl-CpG binding domain protein 5
chr2	48839561;48908337	48908266;48989729	+	48839561;48840187	48840151;48989729	MXE	0.5	100	100	ENSMUST00000112754.8	ENSMUSG00000036792.13	Mbd5	chr2	protein_coding	methyl-CpG binding domain protein 5
chr2	48840187;48908337	48908266;48989729	+	48840187	48989729	cassetteExon	0.5	100	100	ENSMUST00000112754.8	ENSMUSG00000036792.13	Mbd5	chr2	protein_coding	methyl-CpG binding domain protein 5
chr2	49203737;49204027	49203968;49206400	+	49203737	49206400	cassetteExon	0.5	100	100	ENSMUST00000112754.8	ENSMUSG00000036792.13	Mbd5	chr2	protein_coding	methyl-CpG binding domain protein 5
chr2	48840187	48843685	+	48840187	48989729	A3SS	0.33	50	50	ENSMUST00000112754.8	ENSMUSG00000036792.13	Mbd5	chr2	protein_coding	methyl-CpG binding domain protein 5
chr2	48976664	48989729	+	48840187	48989729	A5SS	0.33	50	50	ENSMUST00000112754.8	ENSMUSG00000036792.13	Mbd5	chr2	protein_coding	methyl-CpG binding domain protein 5
chr2	49163069	49164575	+	49162379	49164575	A5SS	0.5	50	50	ENSMUST00000112754.8	ENSMUSG00000036792.13	Mbd5	chr2	protein_coding	methyl-CpG binding domain protein 5
chr2	49169988	49188668	+	49169795	49188668	A5SS	0.33	50	50	ENSMUST00000112754.8	ENSMUSG00000036792.13	Mbd5	chr2	protein_coding	methyl-CpG binding domain protein 5
chr2	48839561	48908266	+	48840187	48908266	5pMXE	0.5	50	50	ENSMUST00000142250.2	ENSMUSG00000036792.13	Mbd5	chr2	protein_coding	methyl-CpG binding domain protein 5
chr2	48840187	48989729	+	48840187	48908266	3pMXE	0.33	50	50	ENSMUST00000142250.2	ENSMUSG00000036792.13	Mbd5	chr2	protein_coding	methyl-CpG binding domain protein 5
chr2	48840187	48843685	+	48840187	48908266	A3SS	0.33	50	50	ENSMUST00000142250.2	ENSMUSG00000036792.13	Mbd5	chr2	protein_coding	methyl-CpG binding domain protein 5
chr2	48908337	48954717	+	48908337	48989729	A3SS	0.33	50	50	ENSMUST00000127085.8	ENSMUSG00000036792.13	Mbd5	chr2	protein_coding	methyl-CpG binding domain protein 5
chr2	49148324	49162053	+	49141435	49162053	A5SS	0.5	50	50	ENSMUST00000199257.2	ENSMUSG00000036792.13	Mbd5	chr2	protein_coding	methyl-CpG binding domain protein 5
chr2	49164786	49168593	+	49164786	49188668	A3SS	0.5	50	50	ENSMUST00000122841.8	ENSMUSG00000036792.13	Mbd5	chr2	protein_coding	methyl-CpG binding domain protein 5
chr2	49169795	49188668	+	49164786	49188668	A5SS	0.33	50	50	ENSMUST00000122841.8	ENSMUSG00000036792.13	Mbd5	chr2	protein_coding	methyl-CpG binding domain protein 5
chr2	49169795	49206400	+	49203737	49206400	A5SS&ES	0.33	50	50	ENSMUST00000122841.8	ENSMUSG00000036792.13	Mbd5	chr2	protein_coding	methyl-CpG binding domain protein 5
chr2	49169988	49188668	+	49164786	49188668	A5SS	0.33	50	50	ENSMUST00000122841.8	ENSMUSG00000036792.13	Mbd5	chr2	protein_coding	methyl-CpG binding domain protein 5
chr2	49169795	49188668	+	49169795	49206400	A3SS	0.5	50	50	ENSMUST00000196831.2	ENSMUSG00000036792.13	Mbd5	chr2	protein_coding	methyl-CpG binding domain protein 5
chr2	49204027	49206400	+	49169795	49206400	A5SS	0.33	50	50	ENSMUST00000196831.2	ENSMUSG00000036792.13	Mbd5	chr2	protein_coding	methyl-CpG binding domain protein 5
chr2	49420155	49425267	+	49420155;49422247	49422056;49425267	ES	0.5	50	50	ENSMUST00000092123.11	ENSMUSG00000069495.13	Epc2	chr2	protein_coding	enhancer of polycomb homolog 2
chr2	49617971;49618580	49618554;49620129	+	49617971	49620129	cassetteExon	0.5	100	100	ENSMUST00000028102.14	ENSMUSG00000026764.16	Kif5c	chr2	protein_coding	kinesin family member 5C
chr2	49612605	49612989	+	49600880	49612989	A5SS	0.5	50	50	ENSMUST00000028102.14	ENSMUSG00000026764.16	Kif5c	chr2	protein_coding	kinesin family member 5C
chr2	49634616	49634698	+	49634478	49634698	A5SS	0.5	50	50	ENSMUST00000028102.14	ENSMUSG00000026764.16	Kif5c	chr2	protein_coding	kinesin family member 5C
chr2	49753918	49820937	+	49753918;49793464	49793388;49820937	ES	0.33	50	50	ENSMUST00000028103.13	ENSMUSG00000026765.13	Lypd6b	chr2	protein_coding	LY6/PLAUR domain containing 6B
chr2	49677785;49730155	49730100;49750713	+	49677785	49750713	cassetteExon	0.5	100	100	ENSMUST00000028103.13	ENSMUSG00000026765.13	Lypd6b	chr2	protein_coding	LY6/PLAUR domain containing 6B
chr2	49677785;49730155	49730100;49753823	+	49677785;49750801	49750713;49753823	MXE	0.5	100	100	ENSMUST00000028103.13	ENSMUSG00000026765.13	Lypd6b	chr2	protein_coding	LY6/PLAUR domain containing 6B
chr2	49753918;49810398	49810318;49820937	+	49753918;49793464	49793388;49820937	MXE	0.5	100	100	ENSMUST00000028103.13	ENSMUSG00000026765.13	Lypd6b	chr2	protein_coding	LY6/PLAUR domain containing 6B
chr2	49820996;49828045	49827865;49832457	+	49820996;49824839	49824774;49832457	MXE	0.5	100	100	ENSMUST00000028103.13	ENSMUSG00000026765.13	Lypd6b	chr2	protein_coding	LY6/PLAUR domain containing 6B
chr2	49730155	49753823	+	49730155;49750801	49750713;49753823	ES	0.5	50	50	ENSMUST00000153422.8	ENSMUSG00000026765.13	Lypd6b	chr2	protein_coding	LY6/PLAUR domain containing 6B
chr2	49753918;49810398	49810318;49820937	+	49753918	49820937	cassetteExon	0.5	100	100	ENSMUST00000153422.8	ENSMUSG00000026765.13	Lypd6b	chr2	protein_coding	LY6/PLAUR domain containing 6B
chr2	49956596;50018546	50018382;50055481	+	49956596	50055481	cassetteExon	0.5	100	100	ENSMUST00000112712.10	ENSMUSG00000050447.16	Lypd6	chr2	protein_coding	LY6/PLAUR domain containing 6
chr2	49956596	50055481	+	50018546	50055481	5pMXE	0.5	50	50	ENSMUST00000169232.2	ENSMUSG00000050447.16	Lypd6	chr2	protein_coding	LY6/PLAUR domain containing 6
chr2	50170414	50171115	-	50170414;50170670	50170585;50171115	ES	0.5	50	50	ENSMUST00000147345.8	ENSMUSG00000026766.17	Mmadhc	chr2	protein_coding	methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria
chr2	50182925	50186264	-	50182910	50186264	A3SS	0.33	50	50	ENSMUST00000147345.8	ENSMUSG00000026766.17	Mmadhc	chr2	protein_coding	methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria
chr2	50182965	50186264	-	50182910	50186264	A3SS	0.33	50	50	ENSMUST00000147345.8	ENSMUSG00000026766.17	Mmadhc	chr2	protein_coding	methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria
chr2	50186321	50186690	-	50186321	50186655	A5SS	0.5	50	50	ENSMUST00000147345.8	ENSMUSG00000026766.17	Mmadhc	chr2	protein_coding	methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria
chr2	50182925	50186264	-	50182965	50186264	A3SS	0.33	50	50	ENSMUST00000102769.11	ENSMUSG00000026766.17	Mmadhc	chr2	protein_coding	methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria
chr2	50186914	50245037	+	50186914	50323107	A3SS	0.5	50	50	ENSMUST00000123699.3	ENSMUSG00000085862.3	Gm13483	chr2	lncRNA	predicted gene 13483
chr2	50186941	50323107	+	50186914	50323107	A5SS	0.5	50	50	ENSMUST00000123699.3	ENSMUSG00000085862.3	Gm13483	chr2	lncRNA	predicted gene 13483
chr2	51311253	51326135	-	51311253	51328673	A5SS	0.5	50	50	ENSMUST00000152467.2	ENSMUSG00000086007.2	1700057H21Rik	chr2	lncRNA	RIKEN cDNA 1700057H21 gene
chr2	51822535	51823321	-	51822535	51824844	A5SS	0.33	50	50	ENSMUST00000102767.8	ENSMUSG00000036249.17	Rbm43	chr2	protein_coding	RNA binding motif protein 43
chr2	51822535	51824560	-	51822535	51824844	A5SS	0.33	50	50	ENSMUST00000102767.8	ENSMUSG00000036249.17	Rbm43	chr2	protein_coding	RNA binding motif protein 43
chr2	51822535	51823321	-	51822535	51824560	A5SS	0.33	50	50	ENSMUST00000165313.2	ENSMUSG00000036249.17	Rbm43	chr2	protein_coding	RNA binding motif protein 43
chr2	51838788	51842454	-	51838788;51840102	51839996;51842454	ES	0.5	50	50	ENSMUST00000028314.9	ENSMUSG00000026946.10	Nmi	chr2	protein_coding	N-myc (and STAT) interactor
chr2	51850672;51862639	51862600;51862986	-	51850672	51862986	cassetteExon	0.5	100	100	ENSMUST00000028314.9	ENSMUSG00000026946.10	Nmi	chr2	protein_coding	N-myc (and STAT) interactor
chr2	51850672	51862921	-	51850672	51862986	A5SS	0.33	50	50	ENSMUST00000028314.9	ENSMUSG00000026946.10	Nmi	chr2	protein_coding	N-myc (and STAT) interactor
chr2	51850672	51862921	-	51850672;51862639	51862600;51862921	ES	0.5	50	50	ENSMUST00000145481.8	ENSMUSG00000026946.10	Nmi	chr2	protein_coding	N-myc (and STAT) interactor
chr2	51850672	51862986	-	51850672	51862600	A5SS&ES	0.33	50	50	ENSMUST00000145481.8	ENSMUSG00000026946.10	Nmi	chr2	protein_coding	N-myc (and STAT) interactor
chr2	51862639	51862986	-	51862639	51862921	A5SS	0.5	50	50	ENSMUST00000145481.8	ENSMUSG00000026946.10	Nmi	chr2	protein_coding	N-myc (and STAT) interactor
chr2	51850672	51862921	-	51850672	51862600	A5SS&ES	0.33	50	50	ENSMUST00000145656.2	ENSMUSG00000026946.10	Nmi	chr2	protein_coding	N-myc (and STAT) interactor
chr2	51963265	51966093	+	51963265;51964337	51964259;51966093	ES	0.5	50	50	ENSMUST00000112693.10	ENSMUSG00000036202.17	Rif1	chr2	protein_coding	replication timing regulatory factor 1
chr2	52006406	52006847	+	52006406;52006757	52006680;52006847	ES	0.5	50	50	ENSMUST00000112693.10	ENSMUSG00000036202.17	Rif1	chr2	protein_coding	replication timing regulatory factor 1
chr2	52006406	52006854	+	52006406	52006680	A3SS&ES	0.33	50	50	ENSMUST00000112693.10	ENSMUSG00000036202.17	Rif1	chr2	protein_coding	replication timing regulatory factor 1
chr2	51983577	51984601	+	51983601	51984601	A5SS	0.5	50	50	ENSMUST00000112693.10	ENSMUSG00000036202.17	Rif1	chr2	protein_coding	replication timing regulatory factor 1
chr2	52006406	52006847	+	52006406	52006854	A3SS	0.33	50	50	ENSMUST00000125322.8	ENSMUSG00000036202.17	Rif1	chr2	protein_coding	replication timing regulatory factor 1
chr2	52050760	52052080	-	52050760;52051487	52051383;52052080	ES	0.5	50	50	ENSMUST00000036934.12	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52051487	52052917	-	52051487;52052184	52052080;52052917	ES	0.5	50	50	ENSMUST00000036934.12	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52054714	52057572	-	52054714;52055289	52055179;52057572	ES	0.5	50	50	ENSMUST00000036934.12	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52225127	52257416	-	52225127	52228503	5pMXE	0.25	50	50	ENSMUST00000036934.12	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52225127	52268401	-	52225127	52228503	5pMXE	0.25	50	50	ENSMUST00000036934.12	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52043160;52043787	52043695;52047303	-	52043160	52047303	cassetteExon	0.5	100	100	ENSMUST00000036934.12	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52039709;52046459	52046367;52047303	-	52039709;52043160	52040549;52047303	MXE	0.5	100	100	ENSMUST00000036934.12	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52041468;52046459	52046367;52047303	-	52041468;52043160	52043068;52047303	MXE	0.5	100	100	ENSMUST00000036934.12	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52073848;52075387	52075283;52076024	-	52073848	52076024	cassetteExon	0.5	100	100	ENSMUST00000036934.12	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52073848;52075387	52075283;52077423	-	52073848;52076128	52076024;52077423	MXE	0.5	100	100	ENSMUST00000036934.12	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52111855	52112749	-	52107097	52112749	A3SS	0.5	50	50	ENSMUST00000036934.12	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52107097	52109102	-	52107097	52112749	A5SS	0.33	50	50	ENSMUST00000036934.12	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52225127	52225693	-	52225127	52228503	A5SS	0.25	50	50	ENSMUST00000036934.12	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52039709;52041468	52041376;52046367	-	52039709	52046367	cassetteExon	0.5	100	100	ENSMUST00000028320.14	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52039709;52041468	52041376;52049489	-	52039709;52047936	52046367;52049489	MXE	0.5	100	100	ENSMUST00000028320.14	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52043160	52047303	-	52046459	52047303	A3SS&ES	0.33	50	50	ENSMUST00000028320.14	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52043787	52047303	-	52046459	52047303	A3SS&ES	0.33	50	50	ENSMUST00000028320.14	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52044674	52046367	-	52039709	52046367	A3SS	0.33	50	50	ENSMUST00000028320.14	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52039709	52040549	-	52039709	52046367	A5SS	0.33	50	50	ENSMUST00000028320.14	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52111855	52112749	-	52111855	52112913	A5SS	0.5	50	50	ENSMUST00000028320.14	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52044674	52046367	-	52041468	52046367	A3SS	0.33	50	50	ENSMUST00000075301.10	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52116658	52117256	-	52107097	52117256	A3SS	0.5	50	50	ENSMUST00000075301.10	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52107097	52109102	-	52107097	52117256	A5SS	0.33	50	50	ENSMUST00000075301.10	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52107097	52112749	-	52107097	52117256	A5SS	0.33	50	50	ENSMUST00000075301.10	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52225127	52257416	-	52225127	52225693	5pMXE	0.25	50	50	ENSMUST00000238288.2	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52225127	52268401	-	52225127	52225693	5pMXE	0.25	50	50	ENSMUST00000238288.2	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52075387	52077423	-	52075387;52076128	52076024;52077423	ES	0.5	50	50	ENSMUST00000238749.2	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52039709;52046459	52046367;52047303	-	52039709;52043787	52040549;52047303	MXE	0.5	100	100	ENSMUST00000137410.8	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52041468;52046459	52046367;52047303	-	52041468;52043787	52043068;52047303	MXE	0.5	100	100	ENSMUST00000137410.8	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52043787	52044582	-	52043787	52047303	A5SS	0.5	50	50	ENSMUST00000137410.8	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52050760;52051487	52051383;52052917	-	52050760;52052184	52052080;52052917	MXE	0.5	100	100	ENSMUST00000135200.2	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52041071	52041376	-	52039709	52041376	A3SS	0.5	50	50	ENSMUST00000135200.2	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52047936	52049489	-	52041468	52049489	A3SS	0.5	50	50	ENSMUST00000135200.2	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52039709	52040549	-	52039709	52041376	A5SS	0.33	50	50	ENSMUST00000135200.2	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52039709	52046367	-	52039709	52041376	A5SS&ES	0.33	50	50	ENSMUST00000135200.2	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52041468	52043068	-	52041468	52049489	A5SS	0.33	50	50	ENSMUST00000135200.2	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52041468	52046367	-	52041468	52049489	A5SS	0.33	50	50	ENSMUST00000135200.2	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52136876	52137168	-	52132112	52137168	A3SS	0.5	50	50	ENSMUST00000139672.2	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52132112	52133205	-	52132112	52137168	A5SS	0.5	50	50	ENSMUST00000139672.2	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52225127	52268401	-	52225127	52257416	5pMXE	0.25	50	50	ENSMUST00000210179.2	ENSMUSG00000026950.19	Neb	chr2	protein_coding	nebulin
chr2	52277627	52280124	+	52277627;52279835	52279740;52280124	ES	0.5	50	50	ENSMUST00000209682.2	ENSMUSG00000086447.3	Gm13522	chr2	lncRNA	predicted gene 13522
chr2	52274763;52275297	52275282;52276426	+	52274763	52276426	cassetteExon	0.5	100	100	ENSMUST00000209682.2	ENSMUSG00000086447.3	Gm13522	chr2	lncRNA	predicted gene 13522
chr2	52277627	52278086	+	52277627	52279740	A3SS	0.33	50	50	ENSMUST00000209682.2	ENSMUSG00000086447.3	Gm13522	chr2	lncRNA	predicted gene 13522
chr2	52276003	52276426	+	52274763	52276426	A5SS	0.33	50	50	ENSMUST00000209682.2	ENSMUSG00000086447.3	Gm13522	chr2	lncRNA	predicted gene 13522
chr2	52277627	52278086	+	52277627	52280124	A3SS	0.33	50	50	ENSMUST00000210632.2	ENSMUSG00000086447.3	Gm13522	chr2	lncRNA	predicted gene 13522
chr2	52276003	52276426	+	52275297	52276426	A5SS	0.33	50	50	ENSMUST00000210726.2	ENSMUSG00000086447.3	Gm13522	chr2	lncRNA	predicted gene 13522
chr2	52355690;52355925	52355906;52357256	-	52355690;52357175	52357156;52357256	MXE	0.5	100	100	ENSMUST00000178799.8	ENSMUSG00000017412.16	Cacnb4	chr2	protein_coding	calcium channel, voltage-dependent, beta 4 subunit
chr2	52367823	52446214	-	52367823	52565740	A5SS	0.33	50	50	ENSMUST00000178799.8	ENSMUSG00000017412.16	Cacnb4	chr2	protein_coding	calcium channel, voltage-dependent, beta 4 subunit
chr2	52367823	52448281	-	52367823	52565740	A5SS	0.33	50	50	ENSMUST00000178799.8	ENSMUSG00000017412.16	Cacnb4	chr2	protein_coding	calcium channel, voltage-dependent, beta 4 subunit
chr2	52565823	52566033	-	52565823	52566283	A5SS	0.5	50	50	ENSMUST00000178799.8	ENSMUSG00000017412.16	Cacnb4	chr2	protein_coding	calcium channel, voltage-dependent, beta 4 subunit
chr2	52367823;52446373	52446214;52448281	-	52367823	52448281	cassetteExon	0.5	100	100	ENSMUST00000102760.10	ENSMUSG00000017412.16	Cacnb4	chr2	protein_coding	calcium channel, voltage-dependent, beta 4 subunit
chr2	52446373	52446607	-	52446373	52448281	A5SS	0.5	50	50	ENSMUST00000102761.9	ENSMUSG00000017412.16	Cacnb4	chr2	protein_coding	calcium channel, voltage-dependent, beta 4 subunit
chr2	52606583	52609914	-	52606583;52609807	52609709;52609914	ES	0.5	50	50	ENSMUST00000102759.8	ENSMUSG00000055371.18	Stam2	chr2	protein_coding	signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
chr2	52610980;52626331	52626143;52632073	-	52610980	52632073	cassetteExon	0.5	100	100	ENSMUST00000102759.8	ENSMUSG00000055371.18	Stam2	chr2	protein_coding	signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
chr2	52610980;52629492	52629175;52632073	-	52610980	52632073	cassetteExon	0.5	100	100	ENSMUST00000102759.8	ENSMUSG00000055371.18	Stam2	chr2	protein_coding	signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
chr2	52610980;52629492	52629175;52632073	-	52610980;52626331	52626143;52632073	MXE	0.5	100	100	ENSMUST00000155516.2	ENSMUSG00000055371.18	Stam2	chr2	protein_coding	signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
chr2	52606583	52609914	-	52609807	52609914	3pMXE	0.5	50	50	ENSMUST00000138290.2	ENSMUSG00000055371.18	Stam2	chr2	protein_coding	signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
chr2	53016988	53021852	+	53016988;53018854	53018729;53021852	ES	0.25	50	50	ENSMUST00000155586.9	ENSMUSG00000036053.18	Fmnl2	chr2	protein_coding	formin-like 2
chr2	53016988;53020470	53020424;53021852	+	53016988;53018854	53018729;53021852	MXE	0.5	100	100	ENSMUST00000155586.9	ENSMUSG00000036053.18	Fmnl2	chr2	protein_coding	formin-like 2
chr2	53016988;53020517	53020424;53021852	+	53016988;53018854	53018729;53021852	MXE	0.5	100	100	ENSMUST00000155586.9	ENSMUSG00000036053.18	Fmnl2	chr2	protein_coding	formin-like 2
chr2	53016988	53021850	+	53016988	53018729	A3SS&ES	0.25	50	50	ENSMUST00000155586.9	ENSMUSG00000036053.18	Fmnl2	chr2	protein_coding	formin-like 2
chr2	53016988;53020470	53020424;53021852	+	53016988	53021852	cassetteExon	0.5	100	100	ENSMUST00000090952.11	ENSMUSG00000036053.18	Fmnl2	chr2	protein_coding	formin-like 2
chr2	53016988;53020517	53020424;53021852	+	53016988	53021852	cassetteExon	0.5	100	100	ENSMUST00000090952.11	ENSMUSG00000036053.18	Fmnl2	chr2	protein_coding	formin-like 2
chr2	53016988	53021850	+	53016988	53021852	A3SS	0.25	50	50	ENSMUST00000090952.11	ENSMUSG00000036053.18	Fmnl2	chr2	protein_coding	formin-like 2
chr2	53016988	53021850	+	53016988	53020424	A3SS&ES	0.25	50	50	ENSMUST00000127122.9	ENSMUSG00000036053.18	Fmnl2	chr2	protein_coding	formin-like 2
chr2	53020470	53021852	+	53020517	53021852	A5SS	0.25	50	50	ENSMUST00000127122.9	ENSMUSG00000036053.18	Fmnl2	chr2	protein_coding	formin-like 2
chr2	53065044;53065247	53065156;53066398	-	53065044	53066398	cassetteExon	0.5	100	100	ENSMUST00000076313.14	ENSMUSG00000061136.17	Prpf40a	chr2	protein_coding	pre-mRNA processing factor 40A
chr2	53067445;53078539	53078460;53079981	-	53067445	53079981	cassetteExon	0.5	100	100	ENSMUST00000076313.14	ENSMUSG00000061136.17	Prpf40a	chr2	protein_coding	pre-mRNA processing factor 40A
chr2	53067445;53078552	53078460;53079981	-	53067445	53079981	cassetteExon	0.5	100	100	ENSMUST00000076313.14	ENSMUSG00000061136.17	Prpf40a	chr2	protein_coding	pre-mRNA processing factor 40A
chr2	53034891	53035298	-	53034891	53035245	A5SS	0.5	50	50	ENSMUST00000076313.14	ENSMUSG00000061136.17	Prpf40a	chr2	protein_coding	pre-mRNA processing factor 40A
chr2	53080112	53081161	-	53080112	53081035	A5SS	0.5	50	50	ENSMUST00000076313.14	ENSMUSG00000061136.17	Prpf40a	chr2	protein_coding	pre-mRNA processing factor 40A
chr2	53078552	53079981	-	53078539	53079981	A3SS	0.33	50	50	ENSMUST00000211712.3	ENSMUSG00000061136.17	Prpf40a	chr2	protein_coding	pre-mRNA processing factor 40A
chr2	53082534	53084296	+	53081892	53084296	A5SS	0.5	50	50	ENSMUST00000155517.2	ENSMUSG00000026960.7	Arl6ip6	chr2	protein_coding	ADP-ribosylation factor-like 6 interacting protein 6
chr2	54326741;54367730	54367660;54406454	+	54326741	54406454	cassetteExon	0.5	100	100	ENSMUST00000112636.8	ENSMUSG00000060988.13	Galnt13	chr2	protein_coding	polypeptide N-acetylgalactosaminyltransferase 13
chr2	54326842	54406454	+	54326741	54406454	A5SS	0.33	50	50	ENSMUST00000112636.8	ENSMUSG00000060988.13	Galnt13	chr2	protein_coding	polypeptide N-acetylgalactosaminyltransferase 13
chr2	54964116	54988575	+	54964008	54988575	A5SS	0.5	50	50	ENSMUST00000112636.8	ENSMUSG00000060988.13	Galnt13	chr2	protein_coding	polypeptide N-acetylgalactosaminyltransferase 13
chr2	54326842	54406454	+	54367730	54406454	A5SS&ES	0.33	50	50	ENSMUST00000112635.8	ENSMUSG00000060988.13	Galnt13	chr2	protein_coding	polypeptide N-acetylgalactosaminyltransferase 13
chr2	55301903	55303039	+	55301903	55311068	A3SS	0.5	50	50	ENSMUST00000155997.2	ENSMUSG00000087040.2	Gm14033	chr2	lncRNA	predicted gene 14033
chr2	55305143	55311068	+	55301903	55311068	A5SS	0.5	50	50	ENSMUST00000155997.2	ENSMUSG00000087040.2	Gm14033	chr2	lncRNA	predicted gene 14033
chr2	55327914	55484823	+	55327914;55337054	55336838;55484823	ES	0.5	50	50	ENSMUST00000067101.10	ENSMUSG00000026824.12	Kcnj3	chr2	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 3
chr2	57003084	57013841	-	57003084	57004730	5pMXE	0.33	50	50	ENSMUST00000028166.9	ENSMUSG00000026826.14	Nr4a2	chr2	protein_coding	nuclear receptor subfamily 4, group A, member 2
chr2	56998630	56999075	-	56998751	56999075	A3SS	0.5	50	50	ENSMUST00000028166.9	ENSMUSG00000026826.14	Nr4a2	chr2	protein_coding	nuclear receptor subfamily 4, group A, member 2
chr2	57002275	57002963	-	57002453	57002963	A3SS	0.5	50	50	ENSMUST00000028166.9	ENSMUSG00000026826.14	Nr4a2	chr2	protein_coding	nuclear receptor subfamily 4, group A, member 2
chr2	57003301	57004730	-	57003084	57004730	A3SS	0.5	50	50	ENSMUST00000028166.9	ENSMUSG00000026826.14	Nr4a2	chr2	protein_coding	nuclear receptor subfamily 4, group A, member 2
chr2	57003084	57004287	-	57003084	57004730	A5SS	0.33	50	50	ENSMUST00000028166.9	ENSMUSG00000026826.14	Nr4a2	chr2	protein_coding	nuclear receptor subfamily 4, group A, member 2
chr2	57003084	57004287	-	57003084	57013841	A5SS	0.33	50	50	ENSMUST00000112629.8	ENSMUSG00000026826.14	Nr4a2	chr2	protein_coding	nuclear receptor subfamily 4, group A, member 2
chr2	57126984	57127769	-	57126984	57127726	A5SS	0.5	50	50	ENSMUST00000156418.8	ENSMUSG00000054181.12	A930012O16Rik	chr2	lncRNA	RIKEN cDNA A930012O16 gene
chr2	57128579	57157985	+	57128000	57157985	A5SS	0.2	50	50	ENSMUST00000141536.8	ENSMUSG00000026827.13	Gpd2	chr2	protein_coding	glycerol phosphate dehydrogenase 2, mitochondrial
chr2	57134443	57157985	+	57128000	57157985	A5SS	0.2	50	50	ENSMUST00000141536.8	ENSMUSG00000026827.13	Gpd2	chr2	protein_coding	glycerol phosphate dehydrogenase 2, mitochondrial
chr2	57155230	57157985	+	57128000	57157985	A5SS	0.2	50	50	ENSMUST00000141536.8	ENSMUSG00000026827.13	Gpd2	chr2	protein_coding	glycerol phosphate dehydrogenase 2, mitochondrial
chr2	57157644	57157985	+	57128000	57157985	A5SS	0.2	50	50	ENSMUST00000141536.8	ENSMUSG00000026827.13	Gpd2	chr2	protein_coding	glycerol phosphate dehydrogenase 2, mitochondrial
chr2	57254155	57254262	+	57235405	57254262	A5SS	0.5	50	50	ENSMUST00000141536.8	ENSMUSG00000026827.13	Gpd2	chr2	protein_coding	glycerol phosphate dehydrogenase 2, mitochondrial
chr2	57247825;57251851	57251798;57254043	+	57247825	57254043	cassetteExon	0.5	100	100	ENSMUST00000169687.8	ENSMUSG00000026827.13	Gpd2	chr2	protein_coding	glycerol phosphate dehydrogenase 2, mitochondrial
chr2	57134443	57157985	+	57128579	57157985	A5SS	0.2	50	50	ENSMUST00000112618.9	ENSMUSG00000026827.13	Gpd2	chr2	protein_coding	glycerol phosphate dehydrogenase 2, mitochondrial
chr2	57155230	57157985	+	57128579	57157985	A5SS	0.2	50	50	ENSMUST00000112618.9	ENSMUSG00000026827.13	Gpd2	chr2	protein_coding	glycerol phosphate dehydrogenase 2, mitochondrial
chr2	57157644	57157985	+	57128579	57157985	A5SS	0.2	50	50	ENSMUST00000112618.9	ENSMUSG00000026827.13	Gpd2	chr2	protein_coding	glycerol phosphate dehydrogenase 2, mitochondrial
chr2	57155230	57157985	+	57134443	57157985	A5SS	0.2	50	50	ENSMUST00000148991.2	ENSMUSG00000026827.13	Gpd2	chr2	protein_coding	glycerol phosphate dehydrogenase 2, mitochondrial
chr2	57157644	57157985	+	57134443	57157985	A5SS	0.2	50	50	ENSMUST00000148991.2	ENSMUSG00000026827.13	Gpd2	chr2	protein_coding	glycerol phosphate dehydrogenase 2, mitochondrial
chr2	57157644	57157985	+	57155230	57157985	A5SS	0.2	50	50	ENSMUST00000124689.8	ENSMUSG00000026827.13	Gpd2	chr2	protein_coding	glycerol phosphate dehydrogenase 2, mitochondrial
chr2	58041775	58085458	-	58041775	58049894	5pMXE	0.33	50	50	ENSMUST00000028175.7	ENSMUSG00000026832.13	Cytip	chr2	protein_coding	cytohesin 1 interacting protein
chr2	58041775	58046736	-	58041775	58049894	A5SS	0.33	50	50	ENSMUST00000028175.7	ENSMUSG00000026832.13	Cytip	chr2	protein_coding	cytohesin 1 interacting protein
chr2	58041775;58050053	58049894;58085458	-	58041775	58085458	cassetteExon	0.5	100	100	ENSMUST00000144117.8	ENSMUSG00000026832.13	Cytip	chr2	protein_coding	cytohesin 1 interacting protein
chr2	58041775;58050278	58049894;58085458	-	58041775	58085458	cassetteExon	0.5	100	100	ENSMUST00000144117.8	ENSMUSG00000026832.13	Cytip	chr2	protein_coding	cytohesin 1 interacting protein
chr2	58041775	58046736	-	58041775	58085458	A5SS	0.33	50	50	ENSMUST00000144117.8	ENSMUSG00000026832.13	Cytip	chr2	protein_coding	cytohesin 1 interacting protein
chr2	58050278	58085458	-	58050053	58085458	A3SS	0.33	50	50	ENSMUST00000148764.8	ENSMUSG00000026832.13	Cytip	chr2	protein_coding	cytohesin 1 interacting protein
chr2	58041775	58085458	-	58050278	58085458	3pMXE	0.33	50	50	ENSMUST00000153052.2	ENSMUSG00000026832.13	Cytip	chr2	protein_coding	cytohesin 1 interacting protein
chr2	58050278	58050513	-	58050278	58085458	A5SS	0.5	50	50	ENSMUST00000153052.2	ENSMUSG00000026832.13	Cytip	chr2	protein_coding	cytohesin 1 interacting protein
chr2	58059789	58065990	+	58059789	58066440	A3SS	0.5	50	50	ENSMUST00000138444.2	ENSMUSG00000086862.2	Gm13546	chr2	lncRNA	predicted gene 13546
chr2	58177923	58205805	-	58177923;58186177	58185938;58205805	ES	0.33	50	50	ENSMUST00000028178.14	ENSMUSG00000026834.14	Acvr1c	chr2	protein_coding	activin A receptor, type IC
chr2	58206035	58214105	-	58206035	58247620	A5SS	0.33	50	50	ENSMUST00000028178.14	ENSMUSG00000026834.14	Acvr1c	chr2	protein_coding	activin A receptor, type IC
chr2	58206035	58214796	-	58206035	58247620	A5SS	0.33	50	50	ENSMUST00000028178.14	ENSMUSG00000026834.14	Acvr1c	chr2	protein_coding	activin A receptor, type IC
chr2	58175011	58205805	-	58175011;58177923	58177693;58205805	ES	0.33	50	50	ENSMUST00000100085.8	ENSMUSG00000026834.14	Acvr1c	chr2	protein_coding	activin A receptor, type IC
chr2	58206035;58214210	58214105;58214796	-	58206035	58214796	cassetteExon	0.5	100	100	ENSMUST00000100085.8	ENSMUSG00000026834.14	Acvr1c	chr2	protein_coding	activin A receptor, type IC
chr2	58186177	58205805	-	58175011	58205805	A3SS	0.33	50	50	ENSMUST00000112607.3	ENSMUSG00000026834.14	Acvr1c	chr2	protein_coding	activin A receptor, type IC
chr2	58177923	58205805	-	58186177	58205805	3pMXE	0.33	50	50	ENSMUST00000154453.2	ENSMUSG00000026834.14	Acvr1c	chr2	protein_coding	activin A receptor, type IC
chr2	58390569	58427790	-	58390569	58406036	5pMXE	0.33	50	50	ENSMUST00000145495.8	ENSMUSG00000026836.16	Acvr1	chr2	protein_coding	activin A receptor, type 1
chr2	58390569;58397533	58397289;58406036	-	58390569	58406036	cassetteExon	0.5	100	100	ENSMUST00000145495.8	ENSMUSG00000026836.16	Acvr1	chr2	protein_coding	activin A receptor, type 1
chr2	58338456	58348897	-	58333628	58348897	A3SS	0.5	50	50	ENSMUST00000145495.8	ENSMUSG00000026836.16	Acvr1	chr2	protein_coding	activin A receptor, type 1
chr2	58427885	58428332	-	58427885	58456799	A5SS	0.5	50	50	ENSMUST00000090935.9	ENSMUSG00000026836.16	Acvr1	chr2	protein_coding	activin A receptor, type 1
chr2	58390569	58427790	-	58390569;58406312	58406036;58427790	ES	0.5	50	50	ENSMUST00000112601.9	ENSMUSG00000026836.16	Acvr1	chr2	protein_coding	activin A receptor, type 1
chr2	58390569	58397289	-	58390569	58427790	A5SS	0.33	50	50	ENSMUST00000056376.12	ENSMUSG00000026836.16	Acvr1	chr2	protein_coding	activin A receptor, type 1
chr2	58457540	58645370	+	58457540	58522677	3pMXE	0.33	50	50	ENSMUST00000135737.2	ENSMUSG00000026839.18	Upp2	chr2	protein_coding	uridine phosphorylase 2
chr2	58457540	58473316	+	58457540	58522677	A3SS	0.33	50	50	ENSMUST00000135737.2	ENSMUSG00000026839.18	Upp2	chr2	protein_coding	uridine phosphorylase 2
chr2	58457540	58645370	+	58457540	58473316	3pMXE	0.33	50	50	ENSMUST00000137007.2	ENSMUSG00000026839.18	Upp2	chr2	protein_coding	uridine phosphorylase 2
chr2	58645434;58649943	58649795;58653687	+	58645434	58653687	cassetteExon	0.5	100	100	ENSMUST00000071543.12	ENSMUSG00000026839.18	Upp2	chr2	protein_coding	uridine phosphorylase 2
chr2	58645434;58651874	58651821;58653687	+	58645434	58653687	cassetteExon	0.5	100	100	ENSMUST00000071543.12	ENSMUSG00000026839.18	Upp2	chr2	protein_coding	uridine phosphorylase 2
chr2	58670160	58676580	+	58670160	58681790	A3SS	0.33	50	50	ENSMUST00000071543.12	ENSMUSG00000026839.18	Upp2	chr2	protein_coding	uridine phosphorylase 2
chr2	58670160	58680041	+	58670160	58681790	A3SS	0.33	50	50	ENSMUST00000071543.12	ENSMUSG00000026839.18	Upp2	chr2	protein_coding	uridine phosphorylase 2
chr2	58655370	58661433	+	58653804	58661433	A5SS	0.5	50	50	ENSMUST00000071543.12	ENSMUSG00000026839.18	Upp2	chr2	protein_coding	uridine phosphorylase 2
chr2	58645434;58649943	58649795;58653687	+	58645434;58651874	58651821;58653687	MXE	0.5	100	100	ENSMUST00000059102.13	ENSMUSG00000026839.18	Upp2	chr2	protein_coding	uridine phosphorylase 2
chr2	58670160;58676691	58676580;58680041	+	58670160	58680041	cassetteExon	0.5	100	100	ENSMUST00000059102.13	ENSMUSG00000026839.18	Upp2	chr2	protein_coding	uridine phosphorylase 2
chr2	58990566	58990691	-	58908617	58990691	A3SS	0.5	50	50	ENSMUST00000226455.2	ENSMUSG00000036641.10	Ccdc148	chr2	protein_coding	coiled-coil domain containing 148
chr2	58796485	58811058	-	58796485	58824381	A5SS	0.5	50	50	ENSMUST00000226455.2	ENSMUSG00000036641.10	Ccdc148	chr2	protein_coding	coiled-coil domain containing 148
chr2	58899197	58907556	-	58899197	58907528	A5SS	0.5	50	50	ENSMUST00000226455.2	ENSMUSG00000036641.10	Ccdc148	chr2	protein_coding	coiled-coil domain containing 148
chr2	59045158	59119562	+	59045158;59096844	59096732;59119562	ES	0.5	50	50	ENSMUST00000168631.8	ENSMUSG00000026991.21	Pkp4	chr2	protein_coding	plakophilin 4
chr2	59096844	59135410	+	59096844;59119596	59119562;59135410	ES	0.5	50	50	ENSMUST00000168631.8	ENSMUSG00000026991.21	Pkp4	chr2	protein_coding	plakophilin 4
chr2	59142257;59144747	59144700;59148856	+	59142257	59148856	cassetteExon	0.5	100	100	ENSMUST00000168631.8	ENSMUSG00000026991.21	Pkp4	chr2	protein_coding	plakophilin 4
chr2	59178385;59180966	59180838;59182606	+	59178385	59182606	cassetteExon	0.5	100	100	ENSMUST00000168631.8	ENSMUSG00000026991.21	Pkp4	chr2	protein_coding	plakophilin 4
chr2	59045158	59045278	+	59045158	59096732	A3SS	0.33	50	50	ENSMUST00000168631.8	ENSMUSG00000026991.21	Pkp4	chr2	protein_coding	plakophilin 4
chr2	59135836	59138429	+	59135836	59138352	A3SS	0.33	50	50	ENSMUST00000168631.8	ENSMUSG00000026991.21	Pkp4	chr2	protein_coding	plakophilin 4
chr2	59135836	59138434	+	59135836	59138352	A3SS	0.33	50	50	ENSMUST00000168631.8	ENSMUSG00000026991.21	Pkp4	chr2	protein_coding	plakophilin 4
chr2	59140634	59142041	+	59140634	59142038	A3SS	0.5	50	50	ENSMUST00000168631.8	ENSMUSG00000026991.21	Pkp4	chr2	protein_coding	plakophilin 4
chr2	58992341	59045022	+	58991472	59045022	A5SS	0.33	50	50	ENSMUST00000168631.8	ENSMUSG00000026991.21	Pkp4	chr2	protein_coding	plakophilin 4
chr2	59031704	59045022	+	58991472	59045022	A5SS	0.33	50	50	ENSMUST00000168631.8	ENSMUSG00000026991.21	Pkp4	chr2	protein_coding	plakophilin 4
chr2	59060198	59096732	+	59045158	59096732	A5SS	0.33	50	50	ENSMUST00000168631.8	ENSMUSG00000026991.21	Pkp4	chr2	protein_coding	plakophilin 4
chr2	59096635	59096732	+	59045158	59096732	A5SS	0.33	50	50	ENSMUST00000168631.8	ENSMUSG00000026991.21	Pkp4	chr2	protein_coding	plakophilin 4
chr2	59153040	59165092	+	59153059	59165092	A5SS	0.5	50	50	ENSMUST00000168631.8	ENSMUSG00000026991.21	Pkp4	chr2	protein_coding	plakophilin 4
chr2	59135836	59138434	+	59135836	59138429	A3SS	0.33	50	50	ENSMUST00000183359.8	ENSMUSG00000026991.21	Pkp4	chr2	protein_coding	plakophilin 4
chr2	59045158;59119596	59119562;59135410	+	59045158;59096844	59096732;59135410	MXE	0.5	100	100	ENSMUST00000183625.8	ENSMUSG00000026991.21	Pkp4	chr2	protein_coding	plakophilin 4
chr2	59045158	59045278	+	59045158	59119562	A3SS	0.33	50	50	ENSMUST00000184332.8	ENSMUSG00000026991.21	Pkp4	chr2	protein_coding	plakophilin 4
chr2	59031704	59045022	+	58992341	59045022	A5SS	0.33	50	50	ENSMUST00000122888.8	ENSMUSG00000026991.21	Pkp4	chr2	protein_coding	plakophilin 4
chr2	59096635	59096732	+	59060198	59096732	A5SS	0.33	50	50	ENSMUST00000112577.8	ENSMUSG00000026991.21	Pkp4	chr2	protein_coding	plakophilin 4
chr2	59215154	59217638	-	59215154	59216968	5pMXE	0.5	50	50	ENSMUST00000137162.8	ENSMUSG00000087455.8	5330411J11Rik	chr2	lncRNA	RIKEN cDNA 5330411J11 gene
chr2	59326962;59330989	59330884;59335055	+	59326962	59335055	cassetteExon	0.5	100	100	ENSMUST00000028369.6	ENSMUSG00000026989.6	Dapl1	chr2	protein_coding	death associated protein-like 1
chr2	59460606	59477113	+	59442540	59477113	A5SS	0.5	50	50	ENSMUST00000112568.8	ENSMUSG00000035168.17	Tanc1	chr2	protein_coding	tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
chr2	59537279	59555005	+	59529771	59555005	A5SS	0.5	50	50	ENSMUST00000112568.8	ENSMUSG00000035168.17	Tanc1	chr2	protein_coding	tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
chr2	59573276	59588809	+	59555193	59588809	A5SS	0.5	50	50	ENSMUST00000112568.8	ENSMUSG00000035168.17	Tanc1	chr2	protein_coding	tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
chr2	59599848	59601476	+	59588913	59601476	A5SS	0.5	50	50	ENSMUST00000112568.8	ENSMUSG00000035168.17	Tanc1	chr2	protein_coding	tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
chr2	59610211	59615668	+	59602883	59615668	A5SS	0.5	50	50	ENSMUST00000112568.8	ENSMUSG00000035168.17	Tanc1	chr2	protein_coding	tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
chr2	59621242	59621943	+	59621221	59621943	A5SS	0.5	50	50	ENSMUST00000112568.8	ENSMUSG00000035168.17	Tanc1	chr2	protein_coding	tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
chr2	59704672;59705579	59705469;59707011	-	59704672	59707011	cassetteExon	0.5	100	100	ENSMUST00000028368.14	ENSMUSG00000026988.16	Wdsub1	chr2	protein_coding	WD repeat, SAM and U-box domain containing 1
chr2	59685619	59688954	-	59683305	59688954	A3SS	0.5	50	50	ENSMUST00000028368.14	ENSMUSG00000026988.16	Wdsub1	chr2	protein_coding	WD repeat, SAM and U-box domain containing 1
chr2	59691807	59691905	-	59689094	59691905	A3SS	0.5	50	50	ENSMUST00000028368.14	ENSMUSG00000026988.16	Wdsub1	chr2	protein_coding	WD repeat, SAM and U-box domain containing 1
chr2	59692084	59692964	-	59692081	59692964	A3SS	0.5	50	50	ENSMUST00000028368.14	ENSMUSG00000026988.16	Wdsub1	chr2	protein_coding	WD repeat, SAM and U-box domain containing 1
chr2	59700829	59703560	-	59694679	59703560	A3SS	0.5	50	50	ENSMUST00000028368.14	ENSMUSG00000026988.16	Wdsub1	chr2	protein_coding	WD repeat, SAM and U-box domain containing 1
chr2	59708875	59712745	-	59708894	59712745	A3SS	0.33	50	50	ENSMUST00000028368.14	ENSMUSG00000026988.16	Wdsub1	chr2	protein_coding	WD repeat, SAM and U-box domain containing 1
chr2	59708931	59712745	-	59708894	59712745	A3SS	0.33	50	50	ENSMUST00000028368.14	ENSMUSG00000026988.16	Wdsub1	chr2	protein_coding	WD repeat, SAM and U-box domain containing 1
chr2	59708894	59712822	-	59708894	59712745	A5SS	0.5	50	50	ENSMUST00000028368.14	ENSMUSG00000026988.16	Wdsub1	chr2	protein_coding	WD repeat, SAM and U-box domain containing 1
chr2	59708894	59712822	-	59708675	59712822	A3SS	0.5	50	50	ENSMUST00000144343.8	ENSMUSG00000026988.16	Wdsub1	chr2	protein_coding	WD repeat, SAM and U-box domain containing 1
chr2	59708875	59712745	-	59708931	59712745	A3SS	0.33	50	50	ENSMUST00000128671.2	ENSMUSG00000026988.16	Wdsub1	chr2	protein_coding	WD repeat, SAM and U-box domain containing 1
chr2	59762514;59763782	59763756;59764015	-	59762514	59764015	cassetteExon	0.5	100	100	ENSMUST00000112550.8	ENSMUSG00000026987.17	Baz2b	chr2	protein_coding	bromodomain adjacent to zinc finger domain, 2B
chr2	59809051;59814314	59814126;59831850	-	59809051	59831850	cassetteExon	0.5	100	100	ENSMUST00000112550.8	ENSMUSG00000026987.17	Baz2b	chr2	protein_coding	bromodomain adjacent to zinc finger domain, 2B
chr2	59836533;59907255	59907214;59955807	-	59836533	59955807	cassetteExon	0.5	100	100	ENSMUST00000112550.8	ENSMUSG00000026987.17	Baz2b	chr2	protein_coding	bromodomain adjacent to zinc finger domain, 2B
chr2	59737395	59737888	-	59737395	59737783	A5SS	0.5	50	50	ENSMUST00000112550.8	ENSMUSG00000026987.17	Baz2b	chr2	protein_coding	bromodomain adjacent to zinc finger domain, 2B
chr2	59907255	59909626	-	59907255	59955807	A5SS	0.5	50	50	ENSMUST00000137480.8	ENSMUSG00000026987.17	Baz2b	chr2	protein_coding	bromodomain adjacent to zinc finger domain, 2B
chr2	59809051	59831850	-	59814314	59831850	3pMXE	0.5	50	50	ENSMUST00000129124.8	ENSMUSG00000026987.17	Baz2b	chr2	protein_coding	bromodomain adjacent to zinc finger domain, 2B
chr2	59836533	59955807	-	59907255	59955807	3pMXE	0.5	50	50	ENSMUST00000144893.2	ENSMUSG00000026987.17	Baz2b	chr2	protein_coding	bromodomain adjacent to zinc finger domain, 2B
chr2	60037307	60040057	-	59991878	60040057	A3SS	0.5	50	50	ENSMUST00000144893.2	ENSMUSG00000026987.17	Baz2b	chr2	protein_coding	bromodomain adjacent to zinc finger domain, 2B
chr2	60037307	60039366	-	60037307	60040057	A5SS	0.5	50	50	ENSMUST00000151756.2	ENSMUSG00000026987.17	Baz2b	chr2	protein_coding	bromodomain adjacent to zinc finger domain, 2B
chr2	60074014	60078234	+	60074014;60075604	60075556;60078234	ES	0.33	50	50	ENSMUST00000102748.11	ENSMUSG00000026977.18	Marchf7	chr2	protein_coding	membrane associated ring-CH-type finger 7
chr2	60040428;60055214	60055114;60059262	+	60040428	60059262	cassetteExon	0.5	100	100	ENSMUST00000102748.11	ENSMUSG00000026977.18	Marchf7	chr2	protein_coding	membrane associated ring-CH-type finger 7
chr2	60075604;60077856	60077832;60078234	+	60075604	60078234	cassetteExon	0.5	100	100	ENSMUST00000102748.11	ENSMUSG00000026977.18	Marchf7	chr2	protein_coding	membrane associated ring-CH-type finger 7
chr2	60062711	60064278	+	60062711	60064243	A3SS	0.5	50	50	ENSMUST00000102748.11	ENSMUSG00000026977.18	Marchf7	chr2	protein_coding	membrane associated ring-CH-type finger 7
chr2	60071419	60073901	+	60071396	60073901	A5SS	0.5	50	50	ENSMUST00000102748.11	ENSMUSG00000026977.18	Marchf7	chr2	protein_coding	membrane associated ring-CH-type finger 7
chr2	60077856	60078234	+	60074014	60078234	A5SS	0.33	50	50	ENSMUST00000143806.2	ENSMUSG00000026977.18	Marchf7	chr2	protein_coding	membrane associated ring-CH-type finger 7
chr2	60040428	60059262	+	60055214	60059262	5pMXE	0.5	50	50	ENSMUST00000067542.15	ENSMUSG00000026977.18	Marchf7	chr2	protein_coding	membrane associated ring-CH-type finger 7
chr2	60074014	60078234	+	60074014	60075556	A3SS	0.5	50	50	ENSMUST00000126986.2	ENSMUSG00000026977.18	Marchf7	chr2	protein_coding	membrane associated ring-CH-type finger 7
chr2	60075604	60078234	+	60077856	60078234	5pMXE	0.33	50	50	ENSMUST00000136367.2	ENSMUSG00000026977.18	Marchf7	chr2	protein_coding	membrane associated ring-CH-type finger 7
chr2	60082835;60085441	60085415;60087377	-	60082835	60087377	cassetteExon	0.5	100	100	ENSMUST00000028356.9	ENSMUSG00000060703.13	Cd302	chr2	protein_coding	CD302 antigen
chr2	60186140;60186341	60186260;60191332	+	60186140	60191332	cassetteExon	0.5	100	100	ENSMUST00000151984.8	ENSMUSG00000086196.8	Gm13571	chr2	lncRNA	predicted gene 13571
chr2	60192386	60193530	+	60192386	60200337	A3SS	0.5	50	50	ENSMUST00000151984.8	ENSMUSG00000086196.8	Gm13571	chr2	lncRNA	predicted gene 13571
chr2	60185890	60185977	+	60183079	60185977	A5SS	0.5	50	50	ENSMUST00000151984.8	ENSMUSG00000086196.8	Gm13571	chr2	lncRNA	predicted gene 13571
chr2	60282830	60288594	-	60282830;60285575	60285430;60288594	ES	0.5	50	50	ENSMUST00000112525.5	ENSMUSG00000054580.15	Pla2r1	chr2	protein_coding	phospholipase A2 receptor 1
chr2	60282830	60288594	-	60282830	60285430	5pMXE	0.5	50	50	ENSMUST00000134583.2	ENSMUSG00000054580.15	Pla2r1	chr2	protein_coding	phospholipase A2 receptor 1
chr2	60383030	60383132	+	60381536	60383132	A5SS	0.5	50	50	ENSMUST00000151931.2	ENSMUSG00000086578.3	Gm13583	chr2	lncRNA	predicted gene 13583
chr2	60499650	60503746	-	60499650;60503055	60502976;60503746	ES	0.5	50	50	ENSMUST00000059888.15	ENSMUSG00000026971.16	Itgb6	chr2	protein_coding	integrin beta 6
chr2	60503821	60503942	-	60503821	60504356	A5SS	0.33	50	50	ENSMUST00000028348.9	ENSMUSG00000026971.16	Itgb6	chr2	protein_coding	integrin beta 6
chr2	60503821	60504014	-	60503821	60504356	A5SS	0.33	50	50	ENSMUST00000028348.9	ENSMUSG00000026971.16	Itgb6	chr2	protein_coding	integrin beta 6
chr2	60503821	60504014	-	60503821	60503942	A5SS	0.33	50	50	ENSMUST00000154764.2	ENSMUSG00000026971.16	Itgb6	chr2	protein_coding	integrin beta 6
chr2	60589198;60590150	60590103;60592397	-	60589198	60592397	cassetteExon	0.5	100	100	ENSMUST00000028347.13	ENSMUSG00000026970.17	Rbms1	chr2	protein_coding	RNA binding motif, single stranded interacting protein 1
chr2	60610154	60611151	-	60610154	60612205	A5SS	0.5	50	50	ENSMUST00000028347.13	ENSMUSG00000026970.17	Rbms1	chr2	protein_coding	RNA binding motif, single stranded interacting protein 1
chr2	60672816	60711462	-	60672816	60793035	A5SS	0.25	50	50	ENSMUST00000028347.13	ENSMUSG00000026970.17	Rbms1	chr2	protein_coding	RNA binding motif, single stranded interacting protein 1
chr2	60672816	60718352	-	60672816	60793035	A5SS	0.25	50	50	ENSMUST00000028347.13	ENSMUSG00000026970.17	Rbms1	chr2	protein_coding	RNA binding motif, single stranded interacting protein 1
chr2	60672816	60719334	-	60672816	60793035	A5SS	0.25	50	50	ENSMUST00000028347.13	ENSMUSG00000026970.17	Rbms1	chr2	protein_coding	RNA binding motif, single stranded interacting protein 1
chr2	60672816	60718352	-	60672816	60711462	5pMXE	0.25	50	50	ENSMUST00000164147.8	ENSMUSG00000026970.17	Rbms1	chr2	protein_coding	RNA binding motif, single stranded interacting protein 1
chr2	60672816	60719334	-	60672816	60711462	5pMXE	0.25	50	50	ENSMUST00000164147.8	ENSMUSG00000026970.17	Rbms1	chr2	protein_coding	RNA binding motif, single stranded interacting protein 1
chr2	60672816	60719334	-	60672816	60718352	5pMXE	0.25	50	50	ENSMUST00000151846.2	ENSMUSG00000026970.17	Rbms1	chr2	protein_coding	RNA binding motif, single stranded interacting protein 1
chr2	61458183;61459716	61459629;61474059	+	61458183	61474059	cassetteExon	0.5	100	100	ENSMUST00000112502.8	ENSMUSG00000064289.16	Tank	chr2	protein_coding	TRAF family member-associated Nf-kappa B activator
chr2	61474766;61476710	61476495;61480082	+	61474766	61480082	cassetteExon	0.5	100	100	ENSMUST00000112502.8	ENSMUSG00000064289.16	Tank	chr2	protein_coding	TRAF family member-associated Nf-kappa B activator
chr2	61480632;61481873	61481771;61483723	+	61480632	61483723	cassetteExon	0.5	100	100	ENSMUST00000112502.8	ENSMUSG00000064289.16	Tank	chr2	protein_coding	TRAF family member-associated Nf-kappa B activator
chr2	61444142	61457247	+	61444142	61457250	A3SS	0.5	50	50	ENSMUST00000112502.8	ENSMUSG00000064289.16	Tank	chr2	protein_coding	TRAF family member-associated Nf-kappa B activator
chr2	61423552	61443995	+	61409037	61443995	A5SS	0.33	50	50	ENSMUST00000112502.8	ENSMUSG00000064289.16	Tank	chr2	protein_coding	TRAF family member-associated Nf-kappa B activator
chr2	61424545	61443995	+	61409037	61443995	A5SS	0.33	50	50	ENSMUST00000112502.8	ENSMUSG00000064289.16	Tank	chr2	protein_coding	TRAF family member-associated Nf-kappa B activator
chr2	61444059	61457250	+	61444142	61457250	A5SS	0.5	50	50	ENSMUST00000112502.8	ENSMUSG00000064289.16	Tank	chr2	protein_coding	TRAF family member-associated Nf-kappa B activator
chr2	61409099	61457247	+	61444142	61457247	A5SS&ES	0.5	50	50	ENSMUST00000078074.9	ENSMUSG00000064289.16	Tank	chr2	protein_coding	TRAF family member-associated Nf-kappa B activator
chr2	61423552;61424545	61424341;61443995	+	61423552	61443995	cassetteExon	0.5	100	100	ENSMUST00000112495.8	ENSMUSG00000064289.16	Tank	chr2	protein_coding	TRAF family member-associated Nf-kappa B activator
chr2	61474766	61480082	+	61474766	61476495	3pMXE	0.5	50	50	ENSMUST00000143515.2	ENSMUSG00000064289.16	Tank	chr2	protein_coding	TRAF family member-associated Nf-kappa B activator
chr2	61553105	61555990	+	61553105	61590980	A3SS	0.33	50	50	ENSMUST00000028278.14	ENSMUSG00000026914.16	Psmd14	chr2	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 14
chr2	61553105	61581188	+	61553105	61590980	A3SS	0.33	50	50	ENSMUST00000028278.14	ENSMUSG00000026914.16	Psmd14	chr2	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 14
chr2	61546301	61550788	+	61542217	61550788	A5SS	0.5	50	50	ENSMUST00000028278.14	ENSMUSG00000026914.16	Psmd14	chr2	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 14
chr2	61553192	61590980	+	61553105	61590980	A5SS	0.5	50	50	ENSMUST00000028278.14	ENSMUSG00000026914.16	Psmd14	chr2	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 14
chr2	61595852	61607017	+	61595343	61607017	A5SS	0.5	50	50	ENSMUST00000028278.14	ENSMUSG00000026914.16	Psmd14	chr2	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 14
chr2	61553105	61581188	+	61553105	61555990	3pMXE	0.33	50	50	ENSMUST00000139475.8	ENSMUSG00000026914.16	Psmd14	chr2	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 14
chr2	61636719	61636976	+	61636472	61636976	A5SS	0.33	50	50	ENSMUST00000048934.15	ENSMUSG00000035033.16	Tbr1	chr2	protein_coding	T-box brain transcription factor 1
chr2	61636850	61636976	+	61636472	61636976	A5SS	0.33	50	50	ENSMUST00000048934.15	ENSMUSG00000035033.16	Tbr1	chr2	protein_coding	T-box brain transcription factor 1
chr2	61636850	61636976	+	61636719	61636976	A5SS	0.33	50	50	ENSMUST00000102737.5	ENSMUSG00000035033.16	Tbr1	chr2	protein_coding	T-box brain transcription factor 1
chr2	62147025	62155069	+	62147025;62147858	62147820;62155069	ES	0.5	50	50	ENSMUST00000102735.10	ENSMUSG00000026904.18	Slc4a10	chr2	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter-like, member 10
chr2	62073797;62074785	62074696;62080723	+	62073797	62080723	cassetteExon	0.5	100	100	ENSMUST00000102735.10	ENSMUSG00000026904.18	Slc4a10	chr2	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter-like, member 10
chr2	62094397;62095523	62095386;62097745	+	62094397	62097745	cassetteExon	0.5	100	100	ENSMUST00000102735.10	ENSMUSG00000026904.18	Slc4a10	chr2	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter-like, member 10
chr2	61978475	61988550	+	61877036	61988550	A5SS	0.5	50	50	ENSMUST00000102735.10	ENSMUSG00000026904.18	Slc4a10	chr2	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter-like, member 10
chr2	62147025	62155069	+	62147858	62155069	5pMXE	0.5	50	50	ENSMUST00000156534.2	ENSMUSG00000026904.18	Slc4a10	chr2	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter-like, member 10
chr2	62217504	62242130	-	62217504;62241643	62241559;62242130	ES	0.33	50	50	ENSMUST00000047812.8	ENSMUSG00000035000.9	Dpp4	chr2	protein_coding	dipeptidylpeptidase 4
chr2	62238286	62242130	-	62241643	62242130	A3SS&ES	0.33	50	50	ENSMUST00000047812.8	ENSMUSG00000035000.9	Dpp4	chr2	protein_coding	dipeptidylpeptidase 4
chr2	62187351	62187714	-	62187351	62189128	A5SS	0.5	50	50	ENSMUST00000047812.8	ENSMUSG00000035000.9	Dpp4	chr2	protein_coding	dipeptidylpeptidase 4
chr2	62238286	62242130	-	62217504	62242130	A3SS	0.33	50	50	ENSMUST00000149306.2	ENSMUSG00000035000.9	Dpp4	chr2	protein_coding	dipeptidylpeptidase 4
chr2	62310912;62312703	62312661;62313910	-	62310912	62313910	cassetteExon	0.5	100	100	ENSMUST00000102733.10	ENSMUSG00000000394.16	Gcg	chr2	protein_coding	glucagon
chr2	62382670	62385089	-	62382670;62384201	62384127;62385089	ES	0.5	50	50	ENSMUST00000102732.10	ENSMUSG00000000392.18	Fap	chr2	protein_coding	fibroblast activation protein
chr2	62385183	62403783	-	62385183;62386543	62386445;62403783	ES	0.33	50	50	ENSMUST00000102732.10	ENSMUSG00000000392.18	Fap	chr2	protein_coding	fibroblast activation protein
chr2	62378236	62378914	-	62378219	62378914	A3SS	0.5	50	50	ENSMUST00000102732.10	ENSMUSG00000000392.18	Fap	chr2	protein_coding	fibroblast activation protein
chr2	62386528	62403783	-	62386543	62403783	A3SS	0.33	50	50	ENSMUST00000102732.10	ENSMUSG00000000392.18	Fap	chr2	protein_coding	fibroblast activation protein
chr2	62332859	62333050	-	62332859	62333144	A5SS	0.5	50	50	ENSMUST00000102732.10	ENSMUSG00000000392.18	Fap	chr2	protein_coding	fibroblast activation protein
chr2	62386543	62393812	-	62386543	62403783	A5SS	0.5	50	50	ENSMUST00000102732.10	ENSMUSG00000000392.18	Fap	chr2	protein_coding	fibroblast activation protein
chr2	62403867	62404190	-	62361105	62404190	A3SS	0.5	50	50	ENSMUST00000152085.9	ENSMUSG00000000392.18	Fap	chr2	protein_coding	fibroblast activation protein
chr2	62361105	62363306	-	62361105	62404190	A5SS	0.5	50	50	ENSMUST00000152085.9	ENSMUSG00000000392.18	Fap	chr2	protein_coding	fibroblast activation protein
chr2	62385183;62386528	62386445;62403783	-	62385183	62403783	cassetteExon	0.5	100	100	ENSMUST00000000402.16	ENSMUSG00000000392.18	Fap	chr2	protein_coding	fibroblast activation protein
chr2	62453841	62469674	-	62453841;62465546	62465400;62469674	ES	0.5	50	50	ENSMUST00000028259.12	ENSMUSG00000026896.15	Ifih1	chr2	protein_coding	interferon induced with helicase C domain 1
chr2	62459944	62465400	-	62453841	62465400	A3SS	0.5	50	50	ENSMUST00000028259.12	ENSMUSG00000026896.15	Ifih1	chr2	protein_coding	interferon induced with helicase C domain 1
chr2	62453841	62469674	-	62465546	62469674	3pMXE	0.5	50	50	ENSMUST00000175964.2	ENSMUSG00000026896.15	Ifih1	chr2	protein_coding	interferon induced with helicase C domain 1
chr2	62667624	62680694	-	62667624;62676118	62676098;62680694	ES	0.5	50	50	ENSMUST00000075052.10	ENSMUSG00000059742.11	Kcnh7	chr2	protein_coding	potassium voltage-gated channel, subfamily H (eag-related), member 7
chr2	63811243	63928186	-	63811243;63927408	63927239;63928186	ES	0.33	50	50	ENSMUST00000131615.9	ENSMUSG00000075324.14	Fign	chr2	protein_coding	fidgetin
chr2	63811243;63858311	63858254;63927239	-	63811243	63927239	cassetteExon	0.5	100	100	ENSMUST00000131615.9	ENSMUSG00000075324.14	Fign	chr2	protein_coding	fidgetin
chr2	63880361	63928186	-	63927408	63928186	A3SS&ES	0.33	50	50	ENSMUST00000131615.9	ENSMUSG00000075324.14	Fign	chr2	protein_coding	fidgetin
chr2	63858311;63880361	63880211;63928186	-	63858311;63927408	63927239;63928186	MXE	0.5	100	100	ENSMUST00000102728.4	ENSMUSG00000075324.14	Fign	chr2	protein_coding	fidgetin
chr2	63880361	63928186	-	63811243	63928186	A3SS	0.33	50	50	ENSMUST00000126042.2	ENSMUSG00000075324.14	Fign	chr2	protein_coding	fidgetin
chr2	63811243	63858254	-	63811243	63928186	A5SS	0.33	50	50	ENSMUST00000126042.2	ENSMUSG00000075324.14	Fign	chr2	protein_coding	fidgetin
chr2	63811243;63927408	63927239;63928186	-	63811243;63880361	63858254;63928186	MXE	0.5	100	100	ENSMUST00000153538.2	ENSMUSG00000075324.14	Fign	chr2	protein_coding	fidgetin
chr2	64743197	64747173	-	64743197	64745060	5pMXE	0.5	50	50	ENSMUST00000134020.2	ENSMUSG00000026888.15	Grb14	chr2	protein_coding	growth factor receptor bound protein 14
chr2	64743219	64745060	-	64743197	64745060	A3SS	0.5	50	50	ENSMUST00000134020.2	ENSMUSG00000026888.15	Grb14	chr2	protein_coding	growth factor receptor bound protein 14
chr2	64743197	64747173	-	64745153	64747173	A3SS&ES	0.5	50	50	ENSMUST00000149193.8	ENSMUSG00000026888.15	Grb14	chr2	protein_coding	growth factor receptor bound protein 14
chr2	64743197;64745153	64745060;64747173	-	64743197	64747173	cassetteExon	0.5	100	100	ENSMUST00000150643.8	ENSMUSG00000026888.15	Grb14	chr2	protein_coding	growth factor receptor bound protein 14
chr2	64784062	64805901	-	64784062	64851431	A5SS	0.5	50	50	ENSMUST00000028252.14	ENSMUSG00000026888.15	Grb14	chr2	protein_coding	growth factor receptor bound protein 14
chr2	64933738	64937356	-	64933738;64936172	64936059;64937356	ES	0.5	50	50	ENSMUST00000112429.9	ENSMUSG00000034903.19	Cobll1	chr2	protein_coding	Cobl-like 1
chr2	64956649;64962878	64962840;64963923	-	64956649	64963923	cassetteExon	0.5	100	100	ENSMUST00000112429.9	ENSMUSG00000034903.19	Cobll1	chr2	protein_coding	Cobl-like 1
chr2	64981511;65002274	65002179;65068707	-	64981511	65068707	cassetteExon	0.5	100	100	ENSMUST00000112429.9	ENSMUSG00000034903.19	Cobll1	chr2	protein_coding	Cobl-like 1
chr2	64981511;65023457	65023370;65068707	-	64981511	65068707	cassetteExon	0.5	100	100	ENSMUST00000112429.9	ENSMUSG00000034903.19	Cobll1	chr2	protein_coding	Cobl-like 1
chr2	64929733	64932413	-	64929736	64932413	A3SS	0.5	50	50	ENSMUST00000112429.9	ENSMUSG00000034903.19	Cobll1	chr2	protein_coding	Cobl-like 1
chr2	64981508	65068707	-	64981511	65068707	A3SS	0.25	50	50	ENSMUST00000112429.9	ENSMUSG00000034903.19	Cobll1	chr2	protein_coding	Cobl-like 1
chr2	64981508	65069326	-	64981508	65068707	5pMXE	0.5	50	50	ENSMUST00000112430.8	ENSMUSG00000034903.19	Cobll1	chr2	protein_coding	Cobl-like 1
chr2	65002274	65068707	-	64981508	65068707	A3SS	0.25	50	50	ENSMUST00000112430.8	ENSMUSG00000034903.19	Cobll1	chr2	protein_coding	Cobl-like 1
chr2	65023457	65068707	-	64981508	65068707	A3SS	0.25	50	50	ENSMUST00000112430.8	ENSMUSG00000034903.19	Cobll1	chr2	protein_coding	Cobl-like 1
chr2	65068833	65069327	-	65068833	65068939	5pMXE	0.33	50	50	ENSMUST00000112431.8	ENSMUSG00000034903.19	Cobll1	chr2	protein_coding	Cobl-like 1
chr2	65068833	65069657	-	65068833	65068939	5pMXE	0.33	50	50	ENSMUST00000112431.8	ENSMUSG00000034903.19	Cobll1	chr2	protein_coding	Cobl-like 1
chr2	64933738	64937356	-	64933738	64936059	5pMXE	0.5	50	50	ENSMUST00000155768.2	ENSMUSG00000034903.19	Cobll1	chr2	protein_coding	Cobl-like 1
chr2	65068833	65069657	-	65068833	65069327	5pMXE	0.33	50	50	ENSMUST00000155916.8	ENSMUSG00000034903.19	Cobll1	chr2	protein_coding	Cobl-like 1
chr2	65023457	65068707	-	65023457	65066268	5pMXE	0.5	50	50	ENSMUST00000132478.8	ENSMUSG00000034903.19	Cobll1	chr2	protein_coding	Cobl-like 1
chr2	64981511	65002179	-	64981511	65023370	A5SS	0.5	50	50	ENSMUST00000132478.8	ENSMUSG00000034903.19	Cobll1	chr2	protein_coding	Cobl-like 1
chr2	64981511;65023457	65023370;65068707	-	64981511;65002274	65002179;65068707	MXE	0.5	100	100	ENSMUST00000155082.2	ENSMUSG00000034903.19	Cobll1	chr2	protein_coding	Cobl-like 1
chr2	65188532	65193691	-	65188532	65191671	5pMXE	0.5	50	50	ENSMUST00000127623.8	ENSMUSG00000061171.16	Slc38a11	chr2	protein_coding	solute carrier family 38, member 11
chr2	65184213;65185733	65185668;65188398	-	65184213	65188398	cassetteExon	0.5	100	100	ENSMUST00000127623.8	ENSMUSG00000061171.16	Slc38a11	chr2	protein_coding	solute carrier family 38, member 11
chr2	65153036	65156870	-	65147374	65156870	A3SS	0.5	50	50	ENSMUST00000127623.8	ENSMUSG00000061171.16	Slc38a11	chr2	protein_coding	solute carrier family 38, member 11
chr2	65185250	65188398	-	65184213	65188398	A3SS	0.33	50	50	ENSMUST00000127623.8	ENSMUSG00000061171.16	Slc38a11	chr2	protein_coding	solute carrier family 38, member 11
chr2	65188532	65193691	-	65188532;65191745	65191671;65193691	ES	0.5	50	50	ENSMUST00000112420.8	ENSMUSG00000061171.16	Slc38a11	chr2	protein_coding	solute carrier family 38, member 11
chr2	65185250	65185668	-	65184213	65185668	A3SS	0.5	50	50	ENSMUST00000112420.8	ENSMUSG00000061171.16	Slc38a11	chr2	protein_coding	solute carrier family 38, member 11
chr2	65185250	65188398	-	65185733	65188398	A3SS&ES	0.33	50	50	ENSMUST00000112420.8	ENSMUSG00000061171.16	Slc38a11	chr2	protein_coding	solute carrier family 38, member 11
chr2	65193811	65194314	-	65193811	65194225	A5SS	0.5	50	50	ENSMUST00000112420.8	ENSMUSG00000061171.16	Slc38a11	chr2	protein_coding	solute carrier family 38, member 11
chr2	65185250	65188398	-	65185250;65185733	65185668;65188398	ES	0.33	50	50	ENSMUST00000155422.8	ENSMUSG00000061171.16	Slc38a11	chr2	protein_coding	solute carrier family 38, member 11
chr2	65184213	65188398	-	65185733	65188398	A3SS&ES	0.33	50	50	ENSMUST00000155422.8	ENSMUSG00000061171.16	Slc38a11	chr2	protein_coding	solute carrier family 38, member 11
chr2	65355220;65356312	65356221;65356841	-	65355220;65356130	65356039;65356841	MXE	0.5	100	100	ENSMUST00000066432.12	ENSMUSG00000057182.16	Scn3a	chr2	protein_coding	sodium channel, voltage-gated, type III, alpha
chr2	65321196	65325267	-	65314810	65325267	A3SS	0.5	50	50	ENSMUST00000066432.12	ENSMUSG00000057182.16	Scn3a	chr2	protein_coding	sodium channel, voltage-gated, type III, alpha
chr2	65314810	65318198	-	65314810	65325267	A5SS	0.5	50	50	ENSMUST00000066432.12	ENSMUSG00000057182.16	Scn3a	chr2	protein_coding	sodium channel, voltage-gated, type III, alpha
chr2	65337623	65338659	-	65337623	65338806	A5SS	0.25	50	50	ENSMUST00000066432.12	ENSMUSG00000057182.16	Scn3a	chr2	protein_coding	sodium channel, voltage-gated, type III, alpha
chr2	65337623	65338710	-	65337623	65338806	A5SS	0.25	50	50	ENSMUST00000066432.12	ENSMUSG00000057182.16	Scn3a	chr2	protein_coding	sodium channel, voltage-gated, type III, alpha
chr2	65337623	65338793	-	65337623	65338806	A5SS	0.25	50	50	ENSMUST00000066432.12	ENSMUSG00000057182.16	Scn3a	chr2	protein_coding	sodium channel, voltage-gated, type III, alpha
chr2	65337623	65338659	-	65337623	65338710	A5SS	0.25	50	50	ENSMUST00000238417.2	ENSMUSG00000057182.16	Scn3a	chr2	protein_coding	sodium channel, voltage-gated, type III, alpha
chr2	65337623	65338793	-	65337623	65338710	A5SS	0.25	50	50	ENSMUST00000238417.2	ENSMUSG00000057182.16	Scn3a	chr2	protein_coding	sodium channel, voltage-gated, type III, alpha
chr2	65337623	65338659	-	65337623	65338793	A5SS	0.25	50	50	ENSMUST00000238512.2	ENSMUSG00000057182.16	Scn3a	chr2	protein_coding	sodium channel, voltage-gated, type III, alpha
chr2	65512469;65512938	65512847;65514015	+	65512469;65513125	65513034;65514015	MXE	0.5	100	100	ENSMUST00000144254.6	ENSMUSG00000075318.14	Scn2a	chr2	protein_coding	sodium channel, voltage-gated, type II, alpha
chr2	65499158	65500789	+	65451359	65500789	A5SS	0.5	50	50	ENSMUST00000144254.6	ENSMUSG00000075318.14	Scn2a	chr2	protein_coding	sodium channel, voltage-gated, type II, alpha
chr2	65537704;65539396	65539262;65542051	+	65537704	65542051	cassetteExon	0.5	100	100	ENSMUST00000028377.14	ENSMUSG00000075318.14	Scn2a	chr2	protein_coding	sodium channel, voltage-gated, type II, alpha
chr2	65548211;65549365	65549282;65556672	+	65548211	65556672	cassetteExon	0.5	100	100	ENSMUST00000028377.14	ENSMUSG00000075318.14	Scn2a	chr2	protein_coding	sodium channel, voltage-gated, type II, alpha
chr2	65548211;65549374	65549282;65556672	+	65548211	65556672	cassetteExon	0.5	100	100	ENSMUST00000028377.14	ENSMUSG00000075318.14	Scn2a	chr2	protein_coding	sodium channel, voltage-gated, type II, alpha
chr2	65512938	65514015	+	65513125	65514015	A5SS	0.5	50	50	ENSMUST00000138368.2	ENSMUSG00000075318.14	Scn2a	chr2	protein_coding	sodium channel, voltage-gated, type II, alpha
chr2	65549374	65556672	+	65549365	65556672	A5SS	0.33	50	50	ENSMUST00000202508.4	ENSMUSG00000075318.14	Scn2a	chr2	protein_coding	sodium channel, voltage-gated, type II, alpha
chr2	65676228	65708309	+	65676228;65691036	65690875;65708309	ES	0.5	50	50	ENSMUST00000122912.8	ENSMUSG00000044647.17	Csrnp3	chr2	protein_coding	cysteine-serine-rich nuclear protein 3
chr2	65779473	65849784	+	65779473;65832906	65832647;65849784	ES	0.5	50	50	ENSMUST00000122912.8	ENSMUSG00000044647.17	Csrnp3	chr2	protein_coding	cysteine-serine-rich nuclear protein 3
chr2	65760734	65779303	+	65708396	65779303	A5SS	0.33	50	50	ENSMUST00000122912.8	ENSMUSG00000044647.17	Csrnp3	chr2	protein_coding	cysteine-serine-rich nuclear protein 3
chr2	65762532	65779303	+	65708396	65779303	A5SS	0.33	50	50	ENSMUST00000122912.8	ENSMUSG00000044647.17	Csrnp3	chr2	protein_coding	cysteine-serine-rich nuclear protein 3
chr2	65676228	65708309	+	65691036	65708309	5pMXE	0.5	50	50	ENSMUST00000129133.2	ENSMUSG00000044647.17	Csrnp3	chr2	protein_coding	cysteine-serine-rich nuclear protein 3
chr2	65762532	65779303	+	65760734	65779303	A5SS	0.33	50	50	ENSMUST00000176109.8	ENSMUSG00000044647.17	Csrnp3	chr2	protein_coding	cysteine-serine-rich nuclear protein 3
chr2	65924010	65925545	-	65924075	65925545	A3SS	0.5	50	50	ENSMUST00000028378.4	ENSMUSG00000026994.10	Galnt3	chr2	protein_coding	polypeptide N-acetylgalactosaminyltransferase 3
chr2	66015187	66018604	-	66015187;66016565	66016498;66018604	ES	0.5	50	50	ENSMUST00000102718.10	ENSMUSG00000034848.18	Ttc21b	chr2	protein_coding	tetratricopeptide repeat domain 21B
chr2	66104406	66111040	-	66104406;66108176	66107906;66111040	ES	0.5	50	50	ENSMUST00000200839.4	ENSMUSG00000064329.14	Scn1a	chr2	protein_coding	sodium channel, voltage-gated, type I, alpha
chr2	66119499	66127097	-	66119499;66124239	66124176;66127097	ES	0.5	50	50	ENSMUST00000200839.4	ENSMUSG00000064329.14	Scn1a	chr2	protein_coding	sodium channel, voltage-gated, type I, alpha
chr2	66181570	66271044	-	66181570	66240206	5pMXE	0.5	50	50	ENSMUST00000112366.8	ENSMUSG00000064329.14	Scn1a	chr2	protein_coding	sodium channel, voltage-gated, type I, alpha
chr2	66153788	66154948	-	66153788	66154915	A5SS	0.33	50	50	ENSMUST00000112366.8	ENSMUSG00000064329.14	Scn1a	chr2	protein_coding	sodium channel, voltage-gated, type I, alpha
chr2	66153788	66154999	-	66153788	66154915	A5SS	0.33	50	50	ENSMUST00000112366.8	ENSMUSG00000064329.14	Scn1a	chr2	protein_coding	sodium channel, voltage-gated, type I, alpha
chr2	66153788	66154999	-	66153788	66154948	A5SS	0.33	50	50	ENSMUST00000112371.9	ENSMUSG00000064329.14	Scn1a	chr2	protein_coding	sodium channel, voltage-gated, type I, alpha
chr2	66314902	66332760	+	66314902	66375884	A3SS	0.5	50	50	ENSMUST00000141149.8	ENSMUSG00000087301.8	Gm13629	chr2	lncRNA	predicted gene 13629
chr2	66392902;66393771	66393680;66395447	-	66392902;66393975	66393884;66395447	MXE	0.5	100	100	ENSMUST00000100064.9	ENSMUSG00000075316.12	Scn9a	chr2	protein_coding	sodium channel, voltage-gated, type IX, alpha
chr2	66396215	66396515	-	66396211	66396515	A3SS	0.5	50	50	ENSMUST00000100064.9	ENSMUSG00000075316.12	Scn9a	chr2	protein_coding	sodium channel, voltage-gated, type IX, alpha
chr2	66367743	66370641	-	66367743	66370608	A5SS	0.5	50	50	ENSMUST00000100064.9	ENSMUSG00000075316.12	Scn9a	chr2	protein_coding	sodium channel, voltage-gated, type IX, alpha
chr2	66380747	66382019	-	66380747	66392690	A5SS	0.5	50	50	ENSMUST00000100064.9	ENSMUSG00000075316.12	Scn9a	chr2	protein_coding	sodium channel, voltage-gated, type IX, alpha
chr2	66396215	66396515	-	66396215	66396515	A3SS	0.5	50	0	ENSMUST00000164384.9	ENSMUSG00000075316.12	Scn9a	chr2	protein_coding	sodium channel, voltage-gated, type IX, alpha
chr2	66396210	66396215	-	66396210	66396215	A5SS	1	50	0	ENSMUST00000164384.9	ENSMUSG00000075316.12	Scn9a	chr2	protein_coding	sodium channel, voltage-gated, type IX, alpha
chr2	67307210	67335378	+	67307210;67312727	67312590;67335378	ES	0.5	50	50	ENSMUST00000239009.2	ENSMUSG00000027022.15	Xirp2	chr2	protein_coding	xin actin-binding repeat containing 2
chr2	67337524	67338253	+	67337524	67349564	A3SS	0.5	50	50	ENSMUST00000239009.2	ENSMUSG00000027022.15	Xirp2	chr2	protein_coding	xin actin-binding repeat containing 2
chr2	67027311	67226452	+	67015221	67226452	A5SS	0.25	50	50	ENSMUST00000239009.2	ENSMUSG00000027022.15	Xirp2	chr2	protein_coding	xin actin-binding repeat containing 2
chr2	67064927	67226452	+	67015221	67226452	A5SS	0.25	50	50	ENSMUST00000239009.2	ENSMUSG00000027022.15	Xirp2	chr2	protein_coding	xin actin-binding repeat containing 2
chr2	67149641	67226452	+	67015221	67226452	A5SS	0.25	50	50	ENSMUST00000239009.2	ENSMUSG00000027022.15	Xirp2	chr2	protein_coding	xin actin-binding repeat containing 2
chr2	67276498	67307062	+	67226605	67307062	A5SS	0.5	50	50	ENSMUST00000239009.2	ENSMUSG00000027022.15	Xirp2	chr2	protein_coding	xin actin-binding repeat containing 2
chr2	67347517	67349564	+	67337524	67349564	A5SS	0.5	50	50	ENSMUST00000239009.2	ENSMUSG00000027022.15	Xirp2	chr2	protein_coding	xin actin-binding repeat containing 2
chr2	67347517	67355116	+	67349697	67355116	A5SS&ES	0.5	50	50	ENSMUST00000239009.2	ENSMUSG00000027022.15	Xirp2	chr2	protein_coding	xin actin-binding repeat containing 2
chr2	67337524	67349564	+	67337524;67347517	67338253;67349564	ES	0.5	50	50	ENSMUST00000238912.2	ENSMUSG00000027022.15	Xirp2	chr2	protein_coding	xin actin-binding repeat containing 2
chr2	67347517	67355116	+	67347517;67349697	67349564;67355116	ES	0.5	50	50	ENSMUST00000238912.2	ENSMUSG00000027022.15	Xirp2	chr2	protein_coding	xin actin-binding repeat containing 2
chr2	67347517	67349580	+	67347517	67349564	A3SS	0.33	50	50	ENSMUST00000238912.2	ENSMUSG00000027022.15	Xirp2	chr2	protein_coding	xin actin-binding repeat containing 2
chr2	67027311	67226452	+	67027311;67149641	67149567;67226452	ES	0.33	50	50	ENSMUST00000239121.2	ENSMUSG00000027022.15	Xirp2	chr2	protein_coding	xin actin-binding repeat containing 2
chr2	67027311;67064927	67064880;67226452	+	67027311;67149641	67149567;67226452	MXE	0.5	100	100	ENSMUST00000239121.2	ENSMUSG00000027022.15	Xirp2	chr2	protein_coding	xin actin-binding repeat containing 2
chr2	67027311;67064927	67064880;67226452	+	67027311	67226452	cassetteExon	0.5	100	100	ENSMUST00000238989.2	ENSMUSG00000027022.15	Xirp2	chr2	protein_coding	xin actin-binding repeat containing 2
chr2	67347517	67355116	+	67347517;67349697	67349580;67355116	ES	0.5	50	50	ENSMUST00000028410.4	ENSMUSG00000027022.15	Xirp2	chr2	protein_coding	xin actin-binding repeat containing 2
chr2	67935067	67948057	+	67903917	67948057	A5SS	0.5	50	50	ENSMUST00000180887.2	ENSMUSG00000034780.7	B3galt1	chr2	protein_coding	UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
chr2	68051312	68053538	-	68051312	68093579	A5SS	0.25	50	50	ENSMUST00000102715.4	ENSMUSG00000027030.16	Stk39	chr2	protein_coding	serine/threonine kinase 39
chr2	68051312	68081523	-	68051312	68093579	A5SS	0.25	50	50	ENSMUST00000102715.4	ENSMUSG00000027030.16	Stk39	chr2	protein_coding	serine/threonine kinase 39
chr2	68051312	68081606	-	68051312	68093579	A5SS	0.25	50	50	ENSMUST00000102715.4	ENSMUSG00000027030.16	Stk39	chr2	protein_coding	serine/threonine kinase 39
chr2	68199449	68216684	-	68199449	68221258	A5SS	0.5	50	50	ENSMUST00000102715.4	ENSMUSG00000027030.16	Stk39	chr2	protein_coding	serine/threonine kinase 39
chr2	68051312	68081523	-	68051312	68053538	5pMXE	0.25	50	50	ENSMUST00000130380.8	ENSMUSG00000027030.16	Stk39	chr2	protein_coding	serine/threonine kinase 39
chr2	68051312	68081606	-	68051312	68053538	5pMXE	0.25	50	50	ENSMUST00000130380.8	ENSMUSG00000027030.16	Stk39	chr2	protein_coding	serine/threonine kinase 39
chr2	68051322	68081523	-	68051312	68081523	A3SS	0.5	50	50	ENSMUST00000134442.8	ENSMUSG00000027030.16	Stk39	chr2	protein_coding	serine/threonine kinase 39
chr2	68051312	68081606	-	68051312	68081523	A5SS	0.25	50	50	ENSMUST00000134442.8	ENSMUSG00000027030.16	Stk39	chr2	protein_coding	serine/threonine kinase 39
chr2	68399424	68400725	+	68397138	68400725	A5SS	0.5	50	50	ENSMUST00000229369.2	ENSMUSG00000116244.2	Gm49461	chr2	transcribed_unprocessed_pseudogene	predicted gene, 49461
chr2	68423168;68423955	68423766;68432075	+	68423168	68432075	cassetteExon	0.5	100	100	ENSMUST00000102713.11	ENSMUSG00000053896.15	4933409G03Rik	chr2	protein_coding	RIKEN cDNA 4933409G03 gene
chr2	68494745	68496482	+	68494745	68496479	A3SS	0.5	50	50	ENSMUST00000125621.2	ENSMUSG00000079324.12	4932414N04Rik	chr2	protein_coding	RIKEN cDNA 4932414N04 gene
chr2	68498021	68498928	+	68498021	68518624	A3SS	0.5	50	50	ENSMUST00000125621.2	ENSMUSG00000079324.12	4932414N04Rik	chr2	protein_coding	RIKEN cDNA 4932414N04 gene
chr2	68488378	68490213	+	68487857	68490213	A5SS	0.5	50	50	ENSMUST00000125621.2	ENSMUSG00000079324.12	4932414N04Rik	chr2	protein_coding	RIKEN cDNA 4932414N04 gene
chr2	68935503;68936110	68936087;68938786	+	68935503	68938786	cassetteExon	0.5	100	100	ENSMUST00000028426.9	ENSMUSG00000027035.11	Cers6	chr2	protein_coding	ceramide synthase 6
chr2	68790358	68833091	+	68777701	68833091	A5SS	0.5	50	50	ENSMUST00000028426.9	ENSMUSG00000027035.11	Cers6	chr2	protein_coding	ceramide synthase 6
chr2	69035300	69035370	-	69035265	69035370	A3SS	0.5	50	50	ENSMUST00000112320.8	ENSMUSG00000005233.17	Spc25	chr2	protein_coding	SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
chr2	69035265	69036408	-	69035265	69035370	A5SS&ES	0.5	50	50	ENSMUST00000112320.8	ENSMUSG00000005233.17	Spc25	chr2	protein_coding	SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
chr2	69035522	69036408	-	69035522	69036174	A5SS	0.5	50	50	ENSMUST00000112320.8	ENSMUSG00000005233.17	Spc25	chr2	protein_coding	SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
chr2	69035265;69035522	69035370;69036408	-	69035265	69036408	cassetteExon	0.5	100	100	ENSMUST00000127243.8	ENSMUSG00000005233.17	Spc25	chr2	protein_coding	SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
chr2	69036226	69036408	-	69035265	69036408	A3SS	0.33	50	50	ENSMUST00000127243.8	ENSMUSG00000005233.17	Spc25	chr2	protein_coding	SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
chr2	69035522;69036226	69036174;69036408	-	69035522	69036408	cassetteExon	0.5	100	100	ENSMUST00000005365.15	ENSMUSG00000005233.17	Spc25	chr2	protein_coding	SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
chr2	69035522	69036408	-	69036226	69036408	3pMXE	0.33	50	50	ENSMUST00000150505.2	ENSMUSG00000005233.17	Spc25	chr2	protein_coding	SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
chr2	69053387	69056912	+	69053387;69056271	69056156;69056912	ES	0.33	50	50	ENSMUST00000129288.2	ENSMUSG00000005232.12	G6pc2	chr2	protein_coding	glucose-6-phosphatase, catalytic, 2
chr2	69050594	69051127	+	69041498	69051127	A5SS	0.5	50	50	ENSMUST00000129288.2	ENSMUSG00000005232.12	G6pc2	chr2	protein_coding	glucose-6-phosphatase, catalytic, 2
chr2	69050594	69056912	+	69056271	69056912	A5SS&ES	0.33	50	50	ENSMUST00000129288.2	ENSMUSG00000005232.12	G6pc2	chr2	protein_coding	glucose-6-phosphatase, catalytic, 2
chr2	69050594	69051127	+	69050594	69056912	A3SS	0.5	50	50	ENSMUST00000151953.2	ENSMUSG00000005232.12	G6pc2	chr2	protein_coding	glucose-6-phosphatase, catalytic, 2
chr2	69053387	69056912	+	69050594	69056912	A5SS	0.33	50	50	ENSMUST00000151953.2	ENSMUSG00000005232.12	G6pc2	chr2	protein_coding	glucose-6-phosphatase, catalytic, 2
chr2	69159716;69160101	69159949;69172861	-	69159716	69172861	cassetteExon	0.5	100	100	ENSMUST00000102710.10	ENSMUSG00000027048.16	Abcb11	chr2	protein_coding	ATP-binding cassette, sub-family B (MDR/TAP), member 11
chr2	69159716;69160882	69160808;69172861	-	69159716	69172861	cassetteExon	0.5	100	100	ENSMUST00000102710.10	ENSMUSG00000027048.16	Abcb11	chr2	protein_coding	ATP-binding cassette, sub-family B (MDR/TAP), member 11
chr2	69155624	69159614	-	69158342	69159614	A3SS&ES	0.5	50	50	ENSMUST00000102710.10	ENSMUSG00000027048.16	Abcb11	chr2	protein_coding	ATP-binding cassette, sub-family B (MDR/TAP), member 11
chr2	69159716;69160882	69160808;69172861	-	69159716;69160101	69159949;69172861	MXE	0.5	100	100	ENSMUST00000102709.8	ENSMUSG00000027048.16	Abcb11	chr2	protein_coding	ATP-binding cassette, sub-family B (MDR/TAP), member 11
chr2	69357633	69357860	-	69355674	69357860	A3SS	0.5	50	50	ENSMUST00000080953.12	ENSMUSG00000027070.15	Lrp2	chr2	protein_coding	low density lipoprotein receptor-related protein 2
chr2	69487336	69493370	+	69487336;69491442	69491380;69493370	ES	0.5	50	50	ENSMUST00000134659.8	ENSMUSG00000063145.11	Bbs5	chr2	protein_coding	Bardet-Biedl syndrome 5 (human)
chr2	69491442	69495370	+	69491442;69493504	69493370;69495370	ES	0.5	50	50	ENSMUST00000134659.8	ENSMUSG00000063145.11	Bbs5	chr2	protein_coding	Bardet-Biedl syndrome 5 (human)
chr2	69484456;69484717	69484590;69485843	+	69484456	69485843	cassetteExon	0.5	100	100	ENSMUST00000134659.8	ENSMUSG00000063145.11	Bbs5	chr2	protein_coding	Bardet-Biedl syndrome 5 (human)
chr2	69487336;69491442	69491380;69495370	+	69487336;69493504	69493370;69495370	MXE	0.5	100	100	ENSMUST00000112286.9	ENSMUSG00000063145.11	Bbs5	chr2	protein_coding	Bardet-Biedl syndrome 5 (human)
chr2	69530582	69532794	-	69530582	69532707	A5SS	0.5	50	50	ENSMUST00000073152.13	ENSMUSG00000027086.17	Fastkd1	chr2	protein_coding	FAST kinase domains 1
chr2	69553301	69561835	+	69553301	69553854	3pMXE	0.33	50	50	ENSMUST00000153772.2	ENSMUSG00000042133.17	Ppig	chr2	protein_coding	peptidyl-prolyl isomerase G (cyclophilin G)
chr2	69553301	69562090	+	69553301	69553854	3pMXE	0.33	50	50	ENSMUST00000153772.2	ENSMUSG00000042133.17	Ppig	chr2	protein_coding	peptidyl-prolyl isomerase G (cyclophilin G)
chr2	69553301;69561924	69561835;69562090	+	69553301	69562090	cassetteExon	0.5	100	100	ENSMUST00000090858.10	ENSMUSG00000042133.17	Ppig	chr2	protein_coding	peptidyl-prolyl isomerase G (cyclophilin G)
chr2	69562798	69563226	+	69562798	69563162	A3SS	0.5	50	50	ENSMUST00000090858.10	ENSMUSG00000042133.17	Ppig	chr2	protein_coding	peptidyl-prolyl isomerase G (cyclophilin G)
chr2	69576459	69579325	+	69576459	69579305	A3SS	0.5	50	50	ENSMUST00000090858.10	ENSMUSG00000042133.17	Ppig	chr2	protein_coding	peptidyl-prolyl isomerase G (cyclophilin G)
chr2	69553707	69562090	+	69553301	69562090	A5SS	0.33	50	50	ENSMUST00000090858.10	ENSMUSG00000042133.17	Ppig	chr2	protein_coding	peptidyl-prolyl isomerase G (cyclophilin G)
chr2	69553707	69561835	+	69553301	69561835	A5SS	0.33	50	50	ENSMUST00000125105.8	ENSMUSG00000042133.17	Ppig	chr2	protein_coding	peptidyl-prolyl isomerase G (cyclophilin G)
chr2	69553707	69562090	+	69561924	69562090	A5SS&ES	0.33	50	50	ENSMUST00000125105.8	ENSMUSG00000042133.17	Ppig	chr2	protein_coding	peptidyl-prolyl isomerase G (cyclophilin G)
chr2	69559636	69561835	+	69553301	69561835	A5SS	0.33	50	50	ENSMUST00000125105.8	ENSMUSG00000042133.17	Ppig	chr2	protein_coding	peptidyl-prolyl isomerase G (cyclophilin G)
chr2	69553707;69561924	69561835;69562090	+	69553707	69562090	cassetteExon	0.5	100	100	ENSMUST00000040915.15	ENSMUSG00000042133.17	Ppig	chr2	protein_coding	peptidyl-prolyl isomerase G (cyclophilin G)
chr2	69559636	69561835	+	69553707	69561835	A5SS	0.33	50	50	ENSMUST00000146234.8	ENSMUSG00000042133.17	Ppig	chr2	protein_coding	peptidyl-prolyl isomerase G (cyclophilin G)
chr2	69622835	69629653	+	69622835	69625820	3pMXE	0.5	50	50	ENSMUST00000151298.8	ENSMUSG00000027088.11	Phospho2	chr2	protein_coding	phosphatase, orphan 2
chr2	69620665	69622681	+	69620665	69622717	A3SS	0.33	50	50	ENSMUST00000151298.8	ENSMUSG00000027088.11	Phospho2	chr2	protein_coding	phosphatase, orphan 2
chr2	69620665	69622737	+	69620665	69622717	A3SS	0.33	50	50	ENSMUST00000151298.8	ENSMUSG00000027088.11	Phospho2	chr2	protein_coding	phosphatase, orphan 2
chr2	69620248	69620630	+	69620300	69620630	A5SS	0.5	50	50	ENSMUST00000151298.8	ENSMUSG00000027088.11	Phospho2	chr2	protein_coding	phosphatase, orphan 2
chr2	69620665	69622737	+	69620665	69622681	A3SS	0.33	50	50	ENSMUST00000028494.9	ENSMUSG00000027088.11	Phospho2	chr2	protein_coding	phosphatase, orphan 2
chr2	69652986	69654131	+	69652403	69654131	A5SS	0.5	50	50	ENSMUST00000135759.2	ENSMUSG00000042155.4	Klhl23	chr2	protein_coding	kelch-like 23
chr2	69655344	69656397	+	69655344	69659190	A3SS	0.5	50	50	ENSMUST00000053087.4	ENSMUSG00000042155.4	Klhl23	chr2	protein_coding	kelch-like 23
chr2	69697723	69699123	+	69697723;69697896	69697796;69699123	ES	0.5	50	50	ENSMUST00000090852.11	ENSMUSG00000068882.14	Ssb	chr2	protein_coding	Sjogren syndrome antigen B
chr2	69700924	69701025	+	69700924	69701022	A3SS	0.5	50	50	ENSMUST00000090852.11	ENSMUSG00000068882.14	Ssb	chr2	protein_coding	Sjogren syndrome antigen B
chr2	69692083	69693568	+	69692056	69693568	A5SS	0.5	50	50	ENSMUST00000090852.11	ENSMUSG00000068882.14	Ssb	chr2	protein_coding	Sjogren syndrome antigen B
chr2	69697723	69699123	+	69697723	69697796	3pMXE	0.5	50	50	ENSMUST00000112260.3	ENSMUSG00000068882.14	Ssb	chr2	protein_coding	Sjogren syndrome antigen B
chr2	69697723	69699123	+	69697896	69699123	A5SS	0.5	50	50	ENSMUST00000156057.2	ENSMUSG00000068882.14	Ssb	chr2	protein_coding	Sjogren syndrome antigen B
chr2	69704279	69711111	-	69704279;69709528	69709446;69711111	ES	0.5	50	50	ENSMUST00000060447.13	ENSMUSG00000051730.16	Mettl5	chr2	protein_coding	methyltransferase like 5
chr2	69704279	69711111	-	69709528	69711111	3pMXE	0.5	50	50	ENSMUST00000135487.2	ENSMUSG00000051730.16	Mettl5	chr2	protein_coding	methyltransferase like 5
chr2	69824156;69829562	69829429;69830802	+	69824156	69830802	cassetteExon	0.5	100	100	ENSMUST00000055758.16	ENSMUSG00000044308.18	Ubr3	chr2	protein_coding	ubiquitin protein ligase E3 component n-recognin 3
chr2	69744897	69747424	+	69744897	69747421	A3SS	0.5	50	50	ENSMUST00000055758.16	ENSMUSG00000044308.18	Ubr3	chr2	protein_coding	ubiquitin protein ligase E3 component n-recognin 3
chr2	69821981	69824020	+	69821969	69824020	A5SS	0.5	50	50	ENSMUST00000055758.16	ENSMUSG00000044308.18	Ubr3	chr2	protein_coding	ubiquitin protein ligase E3 component n-recognin 3
chr2	69869684	69925501	+	69869684	69872382	3pMXE	0.5	50	50	ENSMUST00000140978.2	ENSMUSG00000086132.2	Gm13631	chr2	lncRNA	predicted gene 13631
chr2	69957336	70012919	+	69957336	70019887	A3SS	0.5	50	50	ENSMUST00000060208.11	ENSMUSG00000042064.14	Myo3b	chr2	protein_coding	myosin IIIB
chr2	69913441	69925501	+	69869684	69925501	A5SS	0.5	50	50	ENSMUST00000060208.11	ENSMUSG00000042064.14	Myo3b	chr2	protein_coding	myosin IIIB
chr2	70320943	70321764	-	70320943	70323127	A5SS	0.5	50	50	ENSMUST00000151851.2	ENSMUSG00000087264.2	Gad1os	chr2	lncRNA	glutamate decarboxylase 1, opposite strand
chr2	70340045	70351417	+	70340045;70343160	70343104;70351417	ES	0.5	50	50	ENSMUST00000100041.9	ENSMUSG00000075302.11	Erich2	chr2	protein_coding	glutamate rich 2
chr2	70352851	70353675	+	70352851;70353436	70353388;70353675	ES	0.5	50	50	ENSMUST00000100041.9	ENSMUSG00000075302.11	Erich2	chr2	protein_coding	glutamate rich 2
chr2	70339888	70340000	+	70339909	70340000	A5SS	0.5	50	50	ENSMUST00000100041.9	ENSMUSG00000075302.11	Erich2	chr2	protein_coding	glutamate rich 2
chr2	70392680	70394112	+	70392676	70394112	A5SS	0.33	50	50	ENSMUST00000130618.8	ENSMUSG00000070880.11	Gad1	chr2	protein_coding	glutamate decarboxylase 1
chr2	70393546	70394112	+	70392676	70394112	A5SS	0.33	50	50	ENSMUST00000130618.8	ENSMUSG00000070880.11	Gad1	chr2	protein_coding	glutamate decarboxylase 1
chr2	70396797	70397530	+	70394254	70397530	A5SS	0.5	50	50	ENSMUST00000130618.8	ENSMUSG00000070880.11	Gad1	chr2	protein_coding	glutamate decarboxylase 1
chr2	70409545	70416178	+	70409545;70414843	70414764;70416178	ES	0.5	50	50	ENSMUST00000130604.8	ENSMUSG00000070880.11	Gad1	chr2	protein_coding	glutamate decarboxylase 1
chr2	70393546	70394112	+	70392680	70394112	A5SS	0.33	50	50	ENSMUST00000155979.8	ENSMUSG00000070880.11	Gad1	chr2	protein_coding	glutamate decarboxylase 1
chr2	70409545	70416178	+	70409545	70414764	3pMXE	0.5	50	50	ENSMUST00000148210.8	ENSMUSG00000070880.11	Gad1	chr2	protein_coding	glutamate decarboxylase 1
chr2	70492104	70506809	+	70492104;70503105	70502909;70506809	ES	0.33	50	50	ENSMUST00000112201.8	ENSMUSG00000014959.13	Gorasp2	chr2	protein_coding	golgi reassembly stacking protein 2
chr2	70492713	70506809	+	70503105	70506809	A5SS&ES	0.33	50	50	ENSMUST00000112201.8	ENSMUSG00000014959.13	Gorasp2	chr2	protein_coding	golgi reassembly stacking protein 2
chr2	70492713	70506809	+	70492104	70506809	A5SS	0.33	50	50	ENSMUST00000028509.11	ENSMUSG00000014959.13	Gorasp2	chr2	protein_coding	golgi reassembly stacking protein 2
chr2	70518816	70519527	+	70518816	70541384	A3SS	0.5	50	50	ENSMUST00000133432.8	ENSMUSG00000014959.13	Gorasp2	chr2	protein_coding	golgi reassembly stacking protein 2
chr2	70555921	70568765	-	70555921;70562410	70562158;70568765	ES	0.5	50	50	ENSMUST00000135128.8	ENSMUSG00000041997.17	Tlk1	chr2	protein_coding	tousled-like kinase 1
chr2	70587893	70600348	-	70587893;70599274	70599206;70600348	ES	0.5	50	50	ENSMUST00000135128.8	ENSMUSG00000041997.17	Tlk1	chr2	protein_coding	tousled-like kinase 1
chr2	70600419	70655537	-	70600419;70617339	70617221;70655537	ES	0.33	50	50	ENSMUST00000135128.8	ENSMUSG00000041997.17	Tlk1	chr2	protein_coding	tousled-like kinase 1
chr2	70587893	70655537	-	70587893;70600419	70600348;70655537	ES	0.33	50	50	ENSMUST00000132542.8	ENSMUSG00000041997.17	Tlk1	chr2	protein_coding	tousled-like kinase 1
chr2	70617339	70655537	-	70587893	70655537	A3SS	0.33	50	50	ENSMUST00000133734.8	ENSMUSG00000041997.17	Tlk1	chr2	protein_coding	tousled-like kinase 1
chr2	70587893	70599206	-	70587893	70655537	A5SS	0.33	50	50	ENSMUST00000133734.8	ENSMUSG00000041997.17	Tlk1	chr2	protein_coding	tousled-like kinase 1
chr2	70796857	70803597	-	70796857;70797500	70797394;70803597	ES	0.25	50	50	ENSMUST00000100037.9	ENSMUSG00000041975.18	Mettl8	chr2	protein_coding	methyltransferase like 8
chr2	70803736	70810721	-	70803736;70806481	70806418;70810721	ES	0.33	50	50	ENSMUST00000100037.9	ENSMUSG00000041975.18	Mettl8	chr2	protein_coding	methyltransferase like 8
chr2	70806481	70812199	-	70806481;70810770	70810721;70812199	ES	0.5	50	50	ENSMUST00000100037.9	ENSMUSG00000041975.18	Mettl8	chr2	protein_coding	methyltransferase like 8
chr2	70797500;70801547	70801463;70803597	-	70797500	70803597	cassetteExon	0.5	100	100	ENSMUST00000100037.9	ENSMUSG00000041975.18	Mettl8	chr2	protein_coding	methyltransferase like 8
chr2	70797500;70802677	70802552;70803597	-	70797500	70803597	cassetteExon	0.5	100	100	ENSMUST00000100037.9	ENSMUSG00000041975.18	Mettl8	chr2	protein_coding	methyltransferase like 8
chr2	70823919;70848718	70848564;70885715	-	70823919;70882077	70882016;70885715	MXE	0.5	100	100	ENSMUST00000100037.9	ENSMUSG00000041975.18	Mettl8	chr2	protein_coding	methyltransferase like 8
chr2	70810497	70810721	-	70806481	70810721	A3SS	0.33	50	50	ENSMUST00000100037.9	ENSMUSG00000041975.18	Mettl8	chr2	protein_coding	methyltransferase like 8
chr2	70812311	70823828	-	70812539	70823828	A3SS	0.5	50	50	ENSMUST00000100037.9	ENSMUSG00000041975.18	Mettl8	chr2	protein_coding	methyltransferase like 8
chr2	70803736;70810770	70810721;70812199	-	70803736;70806481	70806418;70812199	MXE	0.5	100	100	ENSMUST00000112179.9	ENSMUSG00000041975.18	Mettl8	chr2	protein_coding	methyltransferase like 8
chr2	70797500;70801547	70801463;70803597	-	70797500;70802677	70802552;70803597	MXE	0.5	100	100	ENSMUST00000148876.8	ENSMUSG00000041975.18	Mettl8	chr2	protein_coding	methyltransferase like 8
chr2	70823919	70882016	-	70823919	70848564	5pMXE	0.5	50	50	ENSMUST00000121586.8	ENSMUSG00000041975.18	Mettl8	chr2	protein_coding	methyltransferase like 8
chr2	70801547	70803597	-	70796857	70803597	A3SS	0.25	50	50	ENSMUST00000121586.8	ENSMUSG00000041975.18	Mettl8	chr2	protein_coding	methyltransferase like 8
chr2	70802677	70803597	-	70796857	70803597	A3SS	0.25	50	50	ENSMUST00000121586.8	ENSMUSG00000041975.18	Mettl8	chr2	protein_coding	methyltransferase like 8
chr2	70810497	70810721	-	70803736	70810721	A3SS	0.33	50	50	ENSMUST00000149181.8	ENSMUSG00000041975.18	Mettl8	chr2	protein_coding	methyltransferase like 8
chr2	70796857	70803597	-	70797500	70803597	3pMXE	0.25	50	50	ENSMUST00000124781.2	ENSMUSG00000041975.18	Mettl8	chr2	protein_coding	methyltransferase like 8
chr2	70803736	70810721	-	70803736	70806418	5pMXE	0.5	50	50	ENSMUST00000124781.2	ENSMUSG00000041975.18	Mettl8	chr2	protein_coding	methyltransferase like 8
chr2	70908508	70912255	+	70908508;70908923	70908818;70912255	ES	0.5	50	50	ENSMUST00000130292.8	ENSMUSG00000041966.19	Dcaf17	chr2	protein_coding	DDB1 and CUL4 associated factor 17
chr2	70893839;70896581	70896468;70903465	+	70893839	70903465	cassetteExon	0.5	100	100	ENSMUST00000130292.8	ENSMUSG00000041966.19	Dcaf17	chr2	protein_coding	DDB1 and CUL4 associated factor 17
chr2	70893839	70905712	+	70893839	70903465	A3SS&ES	0.33	50	50	ENSMUST00000130292.8	ENSMUSG00000041966.19	Dcaf17	chr2	protein_coding	DDB1 and CUL4 associated factor 17
chr2	70886260	70886839	+	70885840	70886839	A5SS	0.33	50	50	ENSMUST00000130292.8	ENSMUSG00000041966.19	Dcaf17	chr2	protein_coding	DDB1 and CUL4 associated factor 17
chr2	70886463	70886839	+	70885840	70886839	A5SS	0.33	50	50	ENSMUST00000130292.8	ENSMUSG00000041966.19	Dcaf17	chr2	protein_coding	DDB1 and CUL4 associated factor 17
chr2	70886260	70886839	+	70886463	70886839	A5SS	0.33	50	50	ENSMUST00000154704.8	ENSMUSG00000041966.19	Dcaf17	chr2	protein_coding	DDB1 and CUL4 associated factor 17
chr2	70916974	70917659	+	70916970	70917659	A5SS	0.5	50	50	ENSMUST00000154704.8	ENSMUSG00000041966.19	Dcaf17	chr2	protein_coding	DDB1 and CUL4 associated factor 17
chr2	70893839	70896468	+	70893839	70905712	A3SS	0.33	50	50	ENSMUST00000112167.9	ENSMUSG00000041966.19	Dcaf17	chr2	protein_coding	DDB1 and CUL4 associated factor 17
chr2	71059034	71066259	+	71059034;71064052	71063993;71066259	ES	0.5	50	50	ENSMUST00000112142.8	ENSMUSG00000027012.16	Dync1i2	chr2	protein_coding	dynein cytoplasmic 1 intermediate chain 2
chr2	71049762;71058188	71058095;71058944	+	71049762	71058944	cassetteExon	0.5	100	100	ENSMUST00000112142.8	ENSMUSG00000027012.16	Dync1i2	chr2	protein_coding	dynein cytoplasmic 1 intermediate chain 2
chr2	71049762;71058188	71058171;71058944	+	71049762	71058944	cassetteExon	0.5	100	100	ENSMUST00000112142.8	ENSMUSG00000027012.16	Dync1i2	chr2	protein_coding	dynein cytoplasmic 1 intermediate chain 2
chr2	71091291	71092995	+	71091291	71092992	A3SS	0.5	50	50	ENSMUST00000112142.8	ENSMUSG00000027012.16	Dync1i2	chr2	protein_coding	dynein cytoplasmic 1 intermediate chain 2
chr2	71042418	71044783	+	71042189	71044783	A5SS	0.5	50	50	ENSMUST00000112142.8	ENSMUSG00000027012.16	Dync1i2	chr2	protein_coding	dynein cytoplasmic 1 intermediate chain 2
chr2	71049762	71058095	+	71049762	71058171	A3SS	0.33	50	50	ENSMUST00000112140.8	ENSMUSG00000027012.16	Dync1i2	chr2	protein_coding	dynein cytoplasmic 1 intermediate chain 2
chr2	71154459	71174234	-	71154459;71164064	71163949;71174234	ES	0.5	50	50	ENSMUST00000151937.8	ENSMUSG00000027010.17	Slc25a12	chr2	protein_coding	solute carrier family 25 (mitochondrial carrier, Aralar), member 12
chr2	71160374	71163949	-	71154459	71163949	A3SS	0.5	50	50	ENSMUST00000151937.8	ENSMUSG00000027010.17	Slc25a12	chr2	protein_coding	solute carrier family 25 (mitochondrial carrier, Aralar), member 12
chr2	71124068	71124937	-	71124068	71127009	A5SS	0.5	50	50	ENSMUST00000151937.8	ENSMUSG00000027010.17	Slc25a12	chr2	protein_coding	solute carrier family 25 (mitochondrial carrier, Aralar), member 12
chr2	71154459	71158778	-	71154459	71163949	A5SS	0.33	50	50	ENSMUST00000151937.8	ENSMUSG00000027010.17	Slc25a12	chr2	protein_coding	solute carrier family 25 (mitochondrial carrier, Aralar), member 12
chr2	71174376	71178112	-	71174376	71196871	A5SS	0.5	50	50	ENSMUST00000151937.8	ENSMUSG00000027010.17	Slc25a12	chr2	protein_coding	solute carrier family 25 (mitochondrial carrier, Aralar), member 12
chr2	71154459	71158778	-	71154459	71174234	A5SS	0.33	50	50	ENSMUST00000184169.8	ENSMUSG00000027010.17	Slc25a12	chr2	protein_coding	solute carrier family 25 (mitochondrial carrier, Aralar), member 12
chr2	71240607	71242207	+	71240607	71250519	A3SS	0.5	50	50	ENSMUST00000112122.9	ENSMUSG00000027018.12	Hat1	chr2	protein_coding	histone aminotransferase 1
chr2	71252083	71264399	+	71252083	71264378	A3SS	0.5	50	50	ENSMUST00000112122.9	ENSMUSG00000027018.12	Hat1	chr2	protein_coding	histone aminotransferase 1
chr2	71342512	71352877	+	71342512;71346144	71345981;71352877	ES	0.5	50	50	ENSMUST00000037210.9	ENSMUSG00000041921.17	Metap1d	chr2	protein_coding	methionyl aminopeptidase type 1D (mitochondrial)
chr2	71283742;71331213	71331123;71337129	+	71283742	71337129	cassetteExon	0.5	100	100	ENSMUST00000037210.9	ENSMUSG00000041921.17	Metap1d	chr2	protein_coding	methionyl aminopeptidase type 1D (mitochondrial)
chr2	71342512	71344968	+	71342512	71345981	A3SS	0.33	50	50	ENSMUST00000037210.9	ENSMUSG00000041921.17	Metap1d	chr2	protein_coding	methionyl aminopeptidase type 1D (mitochondrial)
chr2	71346144	71346242	+	71346144	71352877	A3SS	0.33	50	50	ENSMUST00000037210.9	ENSMUSG00000041921.17	Metap1d	chr2	protein_coding	methionyl aminopeptidase type 1D (mitochondrial)
chr2	71346144	71347393	+	71346144	71352877	A3SS	0.33	50	50	ENSMUST00000037210.9	ENSMUSG00000041921.17	Metap1d	chr2	protein_coding	methionyl aminopeptidase type 1D (mitochondrial)
chr2	71345886	71345981	+	71342512	71345981	A5SS	0.5	50	50	ENSMUST00000037210.9	ENSMUSG00000041921.17	Metap1d	chr2	protein_coding	methionyl aminopeptidase type 1D (mitochondrial)
chr2	71342512	71352877	+	71342512	71344968	3pMXE	0.33	50	50	ENSMUST00000123858.8	ENSMUSG00000041921.17	Metap1d	chr2	protein_coding	methionyl aminopeptidase type 1D (mitochondrial)
chr2	71346144	71346242	+	71346144	71347393	A3SS	0.33	50	50	ENSMUST00000138873.8	ENSMUSG00000041921.17	Metap1d	chr2	protein_coding	methionyl aminopeptidase type 1D (mitochondrial)
chr2	71354623	71357881	-	71348767	71357881	A3SS	0.5	50	50	ENSMUST00000140271.2	ENSMUSG00000084946.3	Dlx1as	chr2	lncRNA	distal-less homeobox 1, antisense
chr2	71363462	71367924	-	71358298	71367924	A3SS	0.5	50	50	ENSMUST00000143767.2	ENSMUSG00000084946.3	Dlx1as	chr2	lncRNA	distal-less homeobox 1, antisense
chr2	71360650	71361398	+	71360650	71361301	A3SS	0.5	50	50	ENSMUST00000037119.4	ENSMUSG00000041911.4	Dlx1	chr2	protein_coding	distal-less homeobox 1
chr2	71359542	71359972	+	71359758	71359972	A5SS	0.5	50	50	ENSMUST00000126400.2	ENSMUSG00000041911.4	Dlx1	chr2	protein_coding	distal-less homeobox 1
chr2	71617664	71646974	+	71611420	71646974	A5SS	0.5	50	50	ENSMUST00000133124.8	ENSMUSG00000027111.17	Itga6	chr2	protein_coding	integrin alpha 6
chr2	71652913;71654783	71654667;71655853	+	71652913	71655853	cassetteExon	0.5	100	100	ENSMUST00000112101.8	ENSMUSG00000027111.17	Itga6	chr2	protein_coding	integrin alpha 6
chr2	71679850;71684007	71683878;71686198	+	71679850	71686198	cassetteExon	0.5	100	100	ENSMUST00000112101.8	ENSMUSG00000027111.17	Itga6	chr2	protein_coding	integrin alpha 6
chr2	71679850	71682607	+	71679850	71686198	A3SS	0.33	50	50	ENSMUST00000112101.8	ENSMUSG00000027111.17	Itga6	chr2	protein_coding	integrin alpha 6
chr2	71679404	71679725	+	71676606	71679725	A5SS	0.5	50	50	ENSMUST00000112101.8	ENSMUSG00000027111.17	Itga6	chr2	protein_coding	integrin alpha 6
chr2	71679850	71682607	+	71679850	71683878	A3SS	0.33	50	50	ENSMUST00000028522.10	ENSMUSG00000027111.17	Itga6	chr2	protein_coding	integrin alpha 6
chr2	71679850	71686198	+	71679850	71683878	3pMXE	0.33	50	50	ENSMUST00000155249.2	ENSMUSG00000027111.17	Itga6	chr2	protein_coding	integrin alpha 6
chr2	71703909	71710383	+	71703909;71705891	71705750;71710383	ES	0.33	50	50	ENSMUST00000006669.6	ENSMUSG00000006494.12	Pdk1	chr2	protein_coding	pyruvate dehydrogenase kinase, isoenzyme 1
chr2	71716403	71719240	+	71716403;71717802	71717726;71719240	ES	0.5	50	50	ENSMUST00000006669.6	ENSMUSG00000006494.12	Pdk1	chr2	protein_coding	pyruvate dehydrogenase kinase, isoenzyme 1
chr2	71705891;71707728	71707617;71710383	+	71705891	71710383	cassetteExon	0.5	100	100	ENSMUST00000006669.6	ENSMUSG00000006494.12	Pdk1	chr2	protein_coding	pyruvate dehydrogenase kinase, isoenzyme 1
chr2	71710454;71711673	71711613;71713767	+	71710454	71713767	cassetteExon	0.5	100	100	ENSMUST00000006669.6	ENSMUSG00000006494.12	Pdk1	chr2	protein_coding	pyruvate dehydrogenase kinase, isoenzyme 1
chr2	71703909	71705751	+	71703909	71705750	A3SS	0.33	50	50	ENSMUST00000006669.6	ENSMUSG00000006494.12	Pdk1	chr2	protein_coding	pyruvate dehydrogenase kinase, isoenzyme 1
chr2	71726143	71726762	+	71726143	71727991	A3SS	0.5	50	50	ENSMUST00000006669.6	ENSMUSG00000006494.12	Pdk1	chr2	protein_coding	pyruvate dehydrogenase kinase, isoenzyme 1
chr2	71704162	71705750	+	71703909	71705750	A5SS	0.33	50	50	ENSMUST00000006669.6	ENSMUSG00000006494.12	Pdk1	chr2	protein_coding	pyruvate dehydrogenase kinase, isoenzyme 1
chr2	71705591	71705750	+	71703909	71705750	A5SS	0.33	50	50	ENSMUST00000006669.6	ENSMUSG00000006494.12	Pdk1	chr2	protein_coding	pyruvate dehydrogenase kinase, isoenzyme 1
chr2	71703909	71710383	+	71703909;71705891	71705751;71710383	ES	0.33	50	50	ENSMUST00000152696.8	ENSMUSG00000006494.12	Pdk1	chr2	protein_coding	pyruvate dehydrogenase kinase, isoenzyme 1
chr2	71707728	71710383	+	71703909	71710383	A5SS	0.33	50	50	ENSMUST00000156036.8	ENSMUSG00000006494.12	Pdk1	chr2	protein_coding	pyruvate dehydrogenase kinase, isoenzyme 1
chr2	71703909	71710383	+	71705891	71710383	A5SS	0.33	50	50	ENSMUST00000148249.8	ENSMUSG00000006494.12	Pdk1	chr2	protein_coding	pyruvate dehydrogenase kinase, isoenzyme 1
chr2	71705591	71705750	+	71704162	71705750	A5SS	0.33	50	50	ENSMUST00000151358.8	ENSMUSG00000006494.12	Pdk1	chr2	protein_coding	pyruvate dehydrogenase kinase, isoenzyme 1
chr2	71716403	71719240	+	71717802	71719240	5pMXE	0.5	50	50	ENSMUST00000129427.2	ENSMUSG00000006494.12	Pdk1	chr2	protein_coding	pyruvate dehydrogenase kinase, isoenzyme 1
chr2	71971516	72005146	+	71971516;72004820	72004767;72005146	ES	0.5	50	50	ENSMUST00000090826.12	ENSMUSG00000049044.17	Rapgef4	chr2	protein_coding	Rap guanine nucleotide exchange factor (GEF) 4
chr2	72073136	72086593	+	72073136;72083338	72083284;72086593	ES	0.5	50	50	ENSMUST00000090826.12	ENSMUSG00000049044.17	Rapgef4	chr2	protein_coding	Rap guanine nucleotide exchange factor (GEF) 4
chr2	71971516	71992795	+	71971516	72004767	A3SS	0.33	50	50	ENSMUST00000090826.12	ENSMUSG00000049044.17	Rapgef4	chr2	protein_coding	Rap guanine nucleotide exchange factor (GEF) 4
chr2	71885368	71967586	+	71875592	71967586	A5SS	0.5	50	50	ENSMUST00000090826.12	ENSMUSG00000049044.17	Rapgef4	chr2	protein_coding	Rap guanine nucleotide exchange factor (GEF) 4
chr2	71971102	71971497	+	71967658	71971497	A5SS	0.5	50	50	ENSMUST00000090826.12	ENSMUSG00000049044.17	Rapgef4	chr2	protein_coding	Rap guanine nucleotide exchange factor (GEF) 4
chr2	71971516	71992795	+	71971516	72005146	A3SS	0.33	50	50	ENSMUST00000102698.10	ENSMUSG00000049044.17	Rapgef4	chr2	protein_coding	Rap guanine nucleotide exchange factor (GEF) 4
chr2	72228769	72232333	+	72228769	72240493	A3SS	0.5	50	50	ENSMUST00000090824.12	ENSMUSG00000004085.15	Map3k20	chr2	protein_coding	mitogen-activated protein kinase kinase kinase 20
chr2	72128382	72128532	+	72116199	72128532	A5SS	0.5	50	50	ENSMUST00000090824.12	ENSMUSG00000004085.15	Map3k20	chr2	protein_coding	mitogen-activated protein kinase kinase kinase 20
chr2	72309372;72310062	72309958;72312035	+	72309372	72312035	cassetteExon	0.5	100	100	ENSMUST00000102691.11	ENSMUSG00000055612.16	Cdca7	chr2	protein_coding	cell division cycle associated 7
chr2	72307022	72309250	+	72306655	72309250	A5SS	0.5	50	50	ENSMUST00000102691.11	ENSMUSG00000055612.16	Cdca7	chr2	protein_coding	cell division cycle associated 7
chr2	72618580;72622619	72622521;72630414	-	72618580	72630414	cassetteExon	0.5	100	100	ENSMUST00000136807.8	ENSMUSG00000085427.8	6430710C18Rik	chr2	lncRNA	RIKEN cDNA 6430710C18 gene
chr2	72615397	72617742	-	72577993	72617742	A3SS	0.5	50	50	ENSMUST00000136807.8	ENSMUSG00000085427.8	6430710C18Rik	chr2	lncRNA	RIKEN cDNA 6430710C18 gene
chr2	72625358	72630414	-	72618580	72630414	A3SS	0.33	50	50	ENSMUST00000136807.8	ENSMUSG00000085427.8	6430710C18Rik	chr2	lncRNA	RIKEN cDNA 6430710C18 gene
chr2	72577993	72581078	-	72577993	72617742	A5SS	0.5	50	50	ENSMUST00000136807.8	ENSMUSG00000085427.8	6430710C18Rik	chr2	lncRNA	RIKEN cDNA 6430710C18 gene
chr2	72622619;72625358	72625273;72630414	-	72622619	72630414	cassetteExon	0.5	100	100	ENSMUST00000148327.8	ENSMUSG00000085427.8	6430710C18Rik	chr2	lncRNA	RIKEN cDNA 6430710C18 gene
chr2	72801858	72809831	-	72801858;72809373	72809242;72809831	ES	0.5	50	50	ENSMUST00000102689.10	ENSMUSG00000027109.17	Sp3	chr2	protein_coding	trans-acting transcription factor 3
chr2	72801858	72809831	-	72801858	72809242	5pMXE	0.5	50	50	ENSMUST00000133615.2	ENSMUSG00000027109.17	Sp3	chr2	protein_coding	trans-acting transcription factor 3
chr2	72817976	72818712	+	72817976	72818694	A3SS	0.33	50	50	ENSMUST00000135297.8	ENSMUSG00000063714.16	Sp3os	chr2	lncRNA	trans-acting transcription factor 3, opposite strand
chr2	72817976	72818716	+	72817976	72818694	A3SS	0.33	50	50	ENSMUST00000135297.8	ENSMUSG00000063714.16	Sp3os	chr2	lncRNA	trans-acting transcription factor 3, opposite strand
chr2	72817976	72818712	+	72817976	72818716	A3SS	0.33	50	50	ENSMUST00000123087.8	ENSMUSG00000063714.16	Sp3os	chr2	lncRNA	trans-acting transcription factor 3, opposite strand
chr2	73033812	73044630	-	73033812;73043304	73043204;73044630	ES	0.5	50	50	ENSMUST00000028517.13	ENSMUSG00000027108.16	Ola1	chr2	protein_coding	Obg-like ATPase 1
chr2	73043304	73048096	-	73043304	73044630	5pMXE	0.5	50	50	ENSMUST00000028517.13	ENSMUSG00000027108.16	Ola1	chr2	protein_coding	Obg-like ATPase 1
chr2	72967999	72972242	-	72930558	72972242	A3SS	0.33	50	50	ENSMUST00000028517.13	ENSMUSG00000027108.16	Ola1	chr2	protein_coding	Obg-like ATPase 1
chr2	73033812	73044630	-	73033812	73043204	5pMXE	0.5	50	50	ENSMUST00000112055.8	ENSMUSG00000027108.16	Ola1	chr2	protein_coding	Obg-like ATPase 1
chr2	72930558	72972242	-	72924068	72972242	A3SS	0.33	50	50	ENSMUST00000112055.8	ENSMUSG00000027108.16	Ola1	chr2	protein_coding	Obg-like ATPase 1
chr2	72967999	72972242	-	72924068	72972242	A3SS	0.33	50	50	ENSMUST00000112055.8	ENSMUSG00000027108.16	Ola1	chr2	protein_coding	Obg-like ATPase 1
chr2	72924068	72927489	-	72924068	72972242	A5SS	0.5	50	50	ENSMUST00000112055.8	ENSMUSG00000027108.16	Ola1	chr2	protein_coding	Obg-like ATPase 1
chr2	73102435	73111888	+	73102435	73103469	3pMXE	0.5	50	50	ENSMUST00000090813.6	ENSMUSG00000068859.6	Sp9	chr2	protein_coding	trans-acting transcription factor 9
chr2	73145936	73149647	+	73145936;73148771	73148590;73149647	ES	0.5	50	50	ENSMUST00000090811.11	ENSMUSG00000008226.15	Scrn3	chr2	protein_coding	secernin 3
chr2	73143057	73145781	+	73143057	73145776	A3SS	0.5	50	50	ENSMUST00000090811.11	ENSMUSG00000008226.15	Scrn3	chr2	protein_coding	secernin 3
chr2	73149845	73152329	+	73149843	73152329	A5SS	0.5	50	50	ENSMUST00000090811.11	ENSMUSG00000008226.15	Scrn3	chr2	protein_coding	secernin 3
chr2	73197942	73200330	-	73197942;73198741	73198658;73200330	ES	0.5	50	50	ENSMUST00000076463.12	ENSMUSG00000041762.17	Gpr155	chr2	protein_coding	G protein-coupled receptor 155
chr2	73212652	73216609	-	73212652;73213302	73213139;73216609	ES	0.33	50	50	ENSMUST00000076463.12	ENSMUSG00000041762.17	Gpr155	chr2	protein_coding	G protein-coupled receptor 155
chr2	73213302;73214536	73214412;73216609	-	73213302	73216609	cassetteExon	0.5	100	100	ENSMUST00000076463.12	ENSMUSG00000041762.17	Gpr155	chr2	protein_coding	G protein-coupled receptor 155
chr2	73178103	73178481	-	73174101	73178481	A3SS	0.5	50	50	ENSMUST00000076463.12	ENSMUSG00000041762.17	Gpr155	chr2	protein_coding	G protein-coupled receptor 155
chr2	73181428	73182193	-	73180035	73182193	A3SS	0.5	50	50	ENSMUST00000076463.12	ENSMUSG00000041762.17	Gpr155	chr2	protein_coding	G protein-coupled receptor 155
chr2	73197853	73198658	-	73197942	73198658	A3SS	0.5	50	50	ENSMUST00000076463.12	ENSMUSG00000041762.17	Gpr155	chr2	protein_coding	G protein-coupled receptor 155
chr2	73214536	73216609	-	73212652	73216609	A3SS	0.33	50	50	ENSMUST00000112044.8	ENSMUSG00000041762.17	Gpr155	chr2	protein_coding	G protein-coupled receptor 155
chr2	73197942	73200330	-	73198741	73200330	A3SS&ES	0.5	50	50	ENSMUST00000129184.2	ENSMUSG00000041762.17	Gpr155	chr2	protein_coding	G protein-coupled receptor 155
chr2	73278281;73319510	73319219;73359671	-	73278281	73359671	cassetteExon	0.5	100	100	ENSMUST00000094681.11	ENSMUSG00000075284.11	Wipf1	chr2	protein_coding	WAS/WASL interacting protein family, member 1
chr2	73278281;73341355	73341287;73359671	-	73278281	73359671	cassetteExon	0.5	100	100	ENSMUST00000094681.11	ENSMUSG00000075284.11	Wipf1	chr2	protein_coding	WAS/WASL interacting protein family, member 1
chr2	73278281	73282735	-	73278281	73359671	A5SS	0.14	50	50	ENSMUST00000094681.11	ENSMUSG00000075284.11	Wipf1	chr2	protein_coding	WAS/WASL interacting protein family, member 1
chr2	73278281	73284068	-	73278281	73359671	A5SS	0.14	50	50	ENSMUST00000094681.11	ENSMUSG00000075284.11	Wipf1	chr2	protein_coding	WAS/WASL interacting protein family, member 1
chr2	73278281	73315967	-	73278281	73359671	A5SS	0.14	50	50	ENSMUST00000094681.11	ENSMUSG00000075284.11	Wipf1	chr2	protein_coding	WAS/WASL interacting protein family, member 1
chr2	73278281	73316724	-	73278281	73359671	A5SS	0.14	50	50	ENSMUST00000094681.11	ENSMUSG00000075284.11	Wipf1	chr2	protein_coding	WAS/WASL interacting protein family, member 1
chr2	73278281	73316724	-	73278281	73315967	5pMXE	0.14	50	50	ENSMUST00000102680.8	ENSMUSG00000075284.11	Wipf1	chr2	protein_coding	WAS/WASL interacting protein family, member 1
chr2	73278281	73319219	-	73278281	73315967	5pMXE	0.14	50	50	ENSMUST00000102680.8	ENSMUSG00000075284.11	Wipf1	chr2	protein_coding	WAS/WASL interacting protein family, member 1
chr2	73278281	73341287	-	73278281	73315967	5pMXE	0.14	50	50	ENSMUST00000102680.8	ENSMUSG00000075284.11	Wipf1	chr2	protein_coding	WAS/WASL interacting protein family, member 1
chr2	73278281	73282735	-	73278281	73315967	A5SS	0.14	50	50	ENSMUST00000102680.8	ENSMUSG00000075284.11	Wipf1	chr2	protein_coding	WAS/WASL interacting protein family, member 1
chr2	73278281	73284068	-	73278281	73315967	A5SS	0.14	50	50	ENSMUST00000102680.8	ENSMUSG00000075284.11	Wipf1	chr2	protein_coding	WAS/WASL interacting protein family, member 1
chr2	73278281	73316724	-	73278281	73284068	5pMXE	0.14	50	50	ENSMUST00000102679.8	ENSMUSG00000075284.11	Wipf1	chr2	protein_coding	WAS/WASL interacting protein family, member 1
chr2	73278281	73319219	-	73278281	73284068	5pMXE	0.14	50	50	ENSMUST00000102679.8	ENSMUSG00000075284.11	Wipf1	chr2	protein_coding	WAS/WASL interacting protein family, member 1
chr2	73278281	73341287	-	73278281	73284068	5pMXE	0.14	50	50	ENSMUST00000102679.8	ENSMUSG00000075284.11	Wipf1	chr2	protein_coding	WAS/WASL interacting protein family, member 1
chr2	73278281	73282735	-	73278281	73284068	A5SS	0.14	50	50	ENSMUST00000102679.8	ENSMUSG00000075284.11	Wipf1	chr2	protein_coding	WAS/WASL interacting protein family, member 1
chr2	73278281	73319219	-	73278281	73316724	5pMXE	0.14	50	50	ENSMUST00000141264.8	ENSMUSG00000075284.11	Wipf1	chr2	protein_coding	WAS/WASL interacting protein family, member 1
chr2	73278281	73341287	-	73278281	73316724	5pMXE	0.14	50	50	ENSMUST00000141264.8	ENSMUSG00000075284.11	Wipf1	chr2	protein_coding	WAS/WASL interacting protein family, member 1
chr2	73278281	73282735	-	73278281	73316724	A5SS	0.14	50	50	ENSMUST00000141264.8	ENSMUSG00000075284.11	Wipf1	chr2	protein_coding	WAS/WASL interacting protein family, member 1
chr2	73278281	73319219	-	73278281	73282735	5pMXE	0.14	50	50	ENSMUST00000151939.2	ENSMUSG00000075284.11	Wipf1	chr2	protein_coding	WAS/WASL interacting protein family, member 1
chr2	73278281	73341287	-	73278281	73282735	5pMXE	0.14	50	50	ENSMUST00000151939.2	ENSMUSG00000075284.11	Wipf1	chr2	protein_coding	WAS/WASL interacting protein family, member 1
chr2	73278281;73319510	73319219;73359671	-	73278281;73341355	73341287;73359671	MXE	0.5	100	100	ENSMUST00000143061.2	ENSMUSG00000075284.11	Wipf1	chr2	protein_coding	WAS/WASL interacting protein family, member 1
chr2	73415351	73419208	+	73415549	73419208	A5SS	0.5	50	50	ENSMUST00000125413.2	ENSMUSG00000086382.2	Chrna1os	chr2	lncRNA	cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle), opposite strand
chr2	73427363	73429203	+	73427363	73442802	A3SS	0.5	50	50	ENSMUST00000147420.2	ENSMUSG00000086544.2	Chn1os3	chr2	lncRNA	chimerin 1, opposite strand 3
chr2	73454536	73462090	-	73454536;73455394	73455221;73462090	ES	0.5	50	50	ENSMUST00000112024.10	ENSMUSG00000056486.19	Chn1	chr2	protein_coding	chimerin 1
chr2	73490101	73537263	-	73490101;73510247	73509959;73537263	ES	0.5	50	50	ENSMUST00000112024.10	ENSMUSG00000056486.19	Chn1	chr2	protein_coding	chimerin 1
chr2	73508181	73509959	-	73490101	73509959	A3SS	0.5	50	50	ENSMUST00000112024.10	ENSMUSG00000056486.19	Chn1	chr2	protein_coding	chimerin 1
chr2	73540826	73546708	-	73540830	73546708	A3SS	0.5	50	50	ENSMUST00000112024.10	ENSMUSG00000056486.19	Chn1	chr2	protein_coding	chimerin 1
chr2	73455394	73455867	-	73455394	73462090	A5SS	0.5	50	50	ENSMUST00000112024.10	ENSMUSG00000056486.19	Chn1	chr2	protein_coding	chimerin 1
chr2	73462174	73462806	-	73462174	73490024	A5SS	0.33	50	50	ENSMUST00000112024.10	ENSMUSG00000056486.19	Chn1	chr2	protein_coding	chimerin 1
chr2	73462174	73485282	-	73462174	73490024	A5SS	0.33	50	50	ENSMUST00000112024.10	ENSMUSG00000056486.19	Chn1	chr2	protein_coding	chimerin 1
chr2	73490101	73490421	-	73490101	73509959	A5SS	0.33	50	50	ENSMUST00000112024.10	ENSMUSG00000056486.19	Chn1	chr2	protein_coding	chimerin 1
chr2	73551785	73552244	-	73551785	73605367	A5SS	0.33	50	50	ENSMUST00000112024.10	ENSMUSG00000056486.19	Chn1	chr2	protein_coding	chimerin 1
chr2	73551785	73599090	-	73551785	73605367	A5SS	0.33	50	50	ENSMUST00000112024.10	ENSMUSG00000056486.19	Chn1	chr2	protein_coding	chimerin 1
chr2	73462174	73485282	-	73462174	73462806	5pMXE	0.33	50	50	ENSMUST00000231013.2	ENSMUSG00000056486.19	Chn1	chr2	protein_coding	chimerin 1
chr2	73454536	73462090	-	73454536	73455221	5pMXE	0.5	50	50	ENSMUST00000229731.2	ENSMUSG00000056486.19	Chn1	chr2	protein_coding	chimerin 1
chr2	73490101	73537263	-	73510247	73537263	A3SS&ES	0.5	50	50	ENSMUST00000124450.2	ENSMUSG00000056486.19	Chn1	chr2	protein_coding	chimerin 1
chr2	73490101	73537263	-	73490101	73490421	5pMXE	0.33	50	50	ENSMUST00000154258.8	ENSMUSG00000056486.19	Chn1	chr2	protein_coding	chimerin 1
chr2	73454536	73462090	-	73455394	73462090	3pMXE	0.5	50	50	ENSMUST00000139252.2	ENSMUSG00000056486.19	Chn1	chr2	protein_coding	chimerin 1
chr2	73551785	73552244	-	73551785	73599090	A5SS	0.33	50	50	ENSMUST00000135904.2	ENSMUSG00000056486.19	Chn1	chr2	protein_coding	chimerin 1
chr2	73672790	73676541	-	73672790	73675783	5pMXE	0.33	50	50	ENSMUST00000124737.8	ENSMUSG00000027104.19	Atf2	chr2	protein_coding	activating transcription factor 2
chr2	73672790	73680933	-	73672790	73675783	5pMXE	0.33	50	50	ENSMUST00000124737.8	ENSMUSG00000027104.19	Atf2	chr2	protein_coding	activating transcription factor 2
chr2	73649492;73653650	73653545;73658816	-	73649492	73658816	cassetteExon	0.5	100	100	ENSMUST00000124737.8	ENSMUSG00000027104.19	Atf2	chr2	protein_coding	activating transcription factor 2
chr2	73658202	73658816	-	73649492	73658816	A3SS	0.33	50	50	ENSMUST00000124737.8	ENSMUSG00000027104.19	Atf2	chr2	protein_coding	activating transcription factor 2
chr2	73672790	73676541	-	73672790;73675897	73675783;73676541	ES	0.5	50	50	ENSMUST00000112010.9	ENSMUSG00000027104.19	Atf2	chr2	protein_coding	activating transcription factor 2
chr2	73676719	73681208	-	73676719;73681061	73680933;73681208	ES	0.5	50	50	ENSMUST00000112010.9	ENSMUSG00000027104.19	Atf2	chr2	protein_coding	activating transcription factor 2
chr2	73704089	73722819	-	73704089;73710725	73710629;73722819	ES	0.33	50	50	ENSMUST00000112010.9	ENSMUSG00000027104.19	Atf2	chr2	protein_coding	activating transcription factor 2
chr2	73653650;73658202	73658131;73658816	-	73653650	73658816	cassetteExon	0.5	100	100	ENSMUST00000112010.9	ENSMUSG00000027104.19	Atf2	chr2	protein_coding	activating transcription factor 2
chr2	73681326;73684235	73684139;73693513	-	73681326	73693513	cassetteExon	0.5	100	100	ENSMUST00000112010.9	ENSMUSG00000027104.19	Atf2	chr2	protein_coding	activating transcription factor 2
chr2	73693582;73701029	73700967;73704014	-	73693582	73704014	cassetteExon	0.5	100	100	ENSMUST00000112010.9	ENSMUSG00000027104.19	Atf2	chr2	protein_coding	activating transcription factor 2
chr2	73710723	73722819	-	73710725	73722819	A3SS	0.33	50	50	ENSMUST00000112010.9	ENSMUSG00000027104.19	Atf2	chr2	protein_coding	activating transcription factor 2
chr2	73704089;73710723	73710629;73722819	-	73704089	73722819	cassetteExon	0.5	100	100	ENSMUST00000090802.11	ENSMUSG00000027104.19	Atf2	chr2	protein_coding	activating transcription factor 2
chr2	73672790;73676719	73676541;73680933	-	73672790	73680933	cassetteExon	0.5	100	100	ENSMUST00000112016.9	ENSMUSG00000027104.19	Atf2	chr2	protein_coding	activating transcription factor 2
chr2	73672790;73676719	73676541;73681208	-	73672790;73681061	73680933;73681208	MXE	0.5	100	100	ENSMUST00000112016.9	ENSMUSG00000027104.19	Atf2	chr2	protein_coding	activating transcription factor 2
chr2	73672790	73676541	-	73675897	73676541	3pMXE	0.5	50	50	ENSMUST00000141050.8	ENSMUSG00000027104.19	Atf2	chr2	protein_coding	activating transcription factor 2
chr2	73672790	73680933	-	73676719	73680933	3pMXE	0.5	50	50	ENSMUST00000129555.2	ENSMUSG00000027104.19	Atf2	chr2	protein_coding	activating transcription factor 2
chr2	73676719	73681208	-	73676719	73680933	5pMXE	0.5	50	50	ENSMUST00000129555.2	ENSMUSG00000027104.19	Atf2	chr2	protein_coding	activating transcription factor 2
chr2	73741404	73741596	-	73741404	73741586	A5SS	0.5	50	50	ENSMUST00000111996.8	ENSMUSG00000018770.10	Atp5g3	chr2	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9)
chr2	74352641	74359975	-	74352641;74358518	74358436;74359975	ES	0.5	50	50	ENSMUST00000111993.9	ENSMUSG00000009207.16	Lnpk	chr2	protein_coding	lunapark, ER junction formation factor
chr2	74381445	74399285	-	74381445;74385390	74385332;74399285	ES	0.5	50	50	ENSMUST00000111993.9	ENSMUSG00000009207.16	Lnpk	chr2	protein_coding	lunapark, ER junction formation factor
chr2	74385390	74401279	-	74385390;74399472	74399285;74401279	ES	0.5	50	50	ENSMUST00000111993.9	ENSMUSG00000009207.16	Lnpk	chr2	protein_coding	lunapark, ER junction formation factor
chr2	74403970	74409659	-	74403970	74409163	5pMXE	0.2	50	50	ENSMUST00000111993.9	ENSMUSG00000009207.16	Lnpk	chr2	protein_coding	lunapark, ER junction formation factor
chr2	74381445	74381805	-	74381445	74385332	A5SS	0.33	50	50	ENSMUST00000111993.9	ENSMUSG00000009207.16	Lnpk	chr2	protein_coding	lunapark, ER junction formation factor
chr2	74403970	74408542	-	74403970	74409163	A5SS	0.2	50	50	ENSMUST00000111993.9	ENSMUSG00000009207.16	Lnpk	chr2	protein_coding	lunapark, ER junction formation factor
chr2	74403970	74408730	-	74403970	74409163	A5SS	0.2	50	50	ENSMUST00000111993.9	ENSMUSG00000009207.16	Lnpk	chr2	protein_coding	lunapark, ER junction formation factor
chr2	74403970	74408896	-	74403970	74409163	A5SS	0.2	50	50	ENSMUST00000111993.9	ENSMUSG00000009207.16	Lnpk	chr2	protein_coding	lunapark, ER junction formation factor
chr2	74381445;74385390	74385332;74401279	-	74381445;74399472	74399285;74401279	MXE	0.5	100	100	ENSMUST00000134641.8	ENSMUSG00000009207.16	Lnpk	chr2	protein_coding	lunapark, ER junction formation factor
chr2	74381445	74381805	-	74381445	74399285	A5SS	0.33	50	50	ENSMUST00000134641.8	ENSMUSG00000009207.16	Lnpk	chr2	protein_coding	lunapark, ER junction formation factor
chr2	74403970	74408730	-	74403970	74408542	5pMXE	0.2	50	50	ENSMUST00000102676.9	ENSMUSG00000009207.16	Lnpk	chr2	protein_coding	lunapark, ER junction formation factor
chr2	74403970	74408896	-	74403970	74408542	5pMXE	0.2	50	50	ENSMUST00000102676.9	ENSMUSG00000009207.16	Lnpk	chr2	protein_coding	lunapark, ER junction formation factor
chr2	74403970	74409659	-	74403970	74408542	5pMXE	0.2	50	50	ENSMUST00000102676.9	ENSMUSG00000009207.16	Lnpk	chr2	protein_coding	lunapark, ER junction formation factor
chr2	74403970	74408730	-	74403970	74409659	A5SS	0.2	50	50	ENSMUST00000130586.8	ENSMUSG00000009207.16	Lnpk	chr2	protein_coding	lunapark, ER junction formation factor
chr2	74403970	74408896	-	74403970	74409659	A5SS	0.2	50	50	ENSMUST00000130586.8	ENSMUSG00000009207.16	Lnpk	chr2	protein_coding	lunapark, ER junction formation factor
chr2	74403970	74408896	-	74403970	74408730	5pMXE	0.2	50	50	ENSMUST00000130232.8	ENSMUSG00000009207.16	Lnpk	chr2	protein_coding	lunapark, ER junction formation factor
chr2	74381445	74399285	-	74381445	74385332	5pMXE	0.33	50	50	ENSMUST00000155006.8	ENSMUSG00000009207.16	Lnpk	chr2	protein_coding	lunapark, ER junction formation factor
chr2	74381445	74399285	-	74385390	74399285	3pMXE	0.5	50	50	ENSMUST00000154706.8	ENSMUSG00000009207.16	Lnpk	chr2	protein_coding	lunapark, ER junction formation factor
chr2	74385390	74401279	-	74399472	74401279	3pMXE	0.5	50	50	ENSMUST00000145293.2	ENSMUSG00000009207.16	Lnpk	chr2	protein_coding	lunapark, ER junction formation factor
chr2	74513511	74514247	+	74510153	74514247	A5SS	0.33	50	50	ENSMUST00000048086.9	ENSMUSG00000042499.14	Hoxd11	chr2	protein_coding	homeobox D11
chr2	74513853	74514247	+	74510153	74514247	A5SS	0.33	50	50	ENSMUST00000048086.9	ENSMUSG00000042499.14	Hoxd11	chr2	protein_coding	homeobox D11
chr2	74513853	74514247	+	74513511	74514247	A5SS	0.33	50	50	ENSMUST00000142312.3	ENSMUSG00000042499.14	Hoxd11	chr2	protein_coding	homeobox D11
chr2	74523068	74524435	+	74514701	74524435	A5SS	0.5	50	50	ENSMUST00000136302.3	ENSMUSG00000099521.2	Gm28309	chr2	lncRNA	predicted gene 28309
chr2	74526071	74527375	+	74526076	74527375	A5SS	0.5	50	50	ENSMUST00000126966.8	ENSMUSG00000086077.8	Gm14396	chr2	lncRNA	predicted gene 14396
chr2	74540625	74542314	-	74533966	74542314	A3SS	0.5	50	50	ENSMUST00000132326.2	ENSMUSG00000052371.6	Hoxd3os1	chr2	lncRNA	homeobox D3, opposite strand 1
chr2	74540625	74544615	-	74540625	74542314	5pMXE	0.5	50	50	ENSMUST00000156342.2	ENSMUSG00000052371.6	Hoxd3os1	chr2	lncRNA	homeobox D3, opposite strand 1
chr2	74536462	74536861	+	74536462	74536858	A3SS	0.5	50	50	ENSMUST00000151380.2	ENSMUSG00000027102.5	Hoxd8	chr2	protein_coding	homeobox D8
chr2	74542660	74552897	+	74542660	74574272	A3SS	0.5	50	50	ENSMUST00000111983.9	ENSMUSG00000079277.10	Hoxd3	chr2	protein_coding	homeobox D3
chr2	74559026	74574272	+	74542660	74574272	A5SS	0.2	50	50	ENSMUST00000111983.9	ENSMUSG00000079277.10	Hoxd3	chr2	protein_coding	homeobox D3
chr2	74563384	74574272	+	74542660	74574272	A5SS	0.2	50	50	ENSMUST00000111983.9	ENSMUSG00000079277.10	Hoxd3	chr2	protein_coding	homeobox D3
chr2	74567049	74574272	+	74542660	74574272	A5SS	0.2	50	50	ENSMUST00000111983.9	ENSMUSG00000079277.10	Hoxd3	chr2	protein_coding	homeobox D3
chr2	74570047	74574272	+	74542660	74574272	A5SS	0.2	50	50	ENSMUST00000111983.9	ENSMUSG00000079277.10	Hoxd3	chr2	protein_coding	homeobox D3
chr2	74576564	74576666	+	74574899	74576666	A5SS	0.5	50	50	ENSMUST00000111983.9	ENSMUSG00000079277.10	Hoxd3	chr2	protein_coding	homeobox D3
chr2	74559026	74574272	+	74563384	74574272	5pMXE	0.2	50	50	ENSMUST00000144544.3	ENSMUSG00000079277.10	Hoxd3	chr2	protein_coding	homeobox D3
chr2	74567049	74574272	+	74563384	74574272	A5SS	0.2	50	50	ENSMUST00000144544.3	ENSMUSG00000079277.10	Hoxd3	chr2	protein_coding	homeobox D3
chr2	74570047	74574272	+	74563384	74574272	A5SS	0.2	50	50	ENSMUST00000144544.3	ENSMUSG00000079277.10	Hoxd3	chr2	protein_coding	homeobox D3
chr2	74559026	74574272	+	74567049	74574272	5pMXE	0.2	50	50	ENSMUST00000111982.8	ENSMUSG00000079277.10	Hoxd3	chr2	protein_coding	homeobox D3
chr2	74570047	74574272	+	74567049	74574272	A5SS	0.2	50	50	ENSMUST00000111982.8	ENSMUSG00000079277.10	Hoxd3	chr2	protein_coding	homeobox D3
chr2	74559026	74574272	+	74570047	74574272	5pMXE	0.2	50	50	ENSMUST00000047830.8	ENSMUSG00000079277.10	Hoxd3	chr2	protein_coding	homeobox D3
chr2	74552521	74552897	+	74542660	74552897	A5SS	0.5	50	50	ENSMUST00000144040.9	ENSMUSG00000101174.9	Hoxd4	chr2	protein_coding	homeobox D4
chr2	74558049	74558703	+	74557276	74558703	A5SS	0.5	50	50	ENSMUST00000144040.9	ENSMUSG00000101174.9	Hoxd4	chr2	protein_coding	homeobox D4
chr2	74558049	74558703	+	74558049	74558606	A3SS	0.5	50	50	ENSMUST00000047904.4	ENSMUSG00000101174.9	Hoxd4	chr2	protein_coding	homeobox D4
chr2	74580920	74581873	-	74580987	74581873	A3SS	0.5	50	50	ENSMUST00000230704.2	ENSMUSG00000075277.6	Haglr	chr2	lncRNA	Hoxd antisense growth associated long non-coding RNA
chr2	74582287	74583537	-	74582287	74584215	A5SS	0.33	50	50	ENSMUST00000230704.2	ENSMUSG00000075277.6	Haglr	chr2	lncRNA	Hoxd antisense growth associated long non-coding RNA
chr2	74582287	74583767	-	74582287	74584215	A5SS	0.33	50	50	ENSMUST00000230704.2	ENSMUSG00000075277.6	Haglr	chr2	lncRNA	Hoxd antisense growth associated long non-coding RNA
chr2	74582287	74583537	-	74582287	74583767	A5SS	0.33	50	50	ENSMUST00000230511.2	ENSMUSG00000075277.6	Haglr	chr2	lncRNA	Hoxd antisense growth associated long non-coding RNA
chr2	74581986	74582178	-	74581986	74593123	A5SS	0.5	50	50	ENSMUST00000152462.3	ENSMUSG00000075277.6	Haglr	chr2	lncRNA	Hoxd antisense growth associated long non-coding RNA
chr2	75137378	75142935	+	75137378;75141486	75141361;75142935	ES	0.25	50	50	ENSMUST00000230629.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75078863;75103587	75103411;75135795	+	75078863	75135795	cassetteExon	0.5	100	100	ENSMUST00000230629.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75078863;75103587	75103411;75141361	+	75078863;75137378	75135795;75141361	MXE	0.5	100	100	ENSMUST00000230629.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75078863;75132010	75131987;75135795	+	75078863	75135795	cassetteExon	0.5	100	100	ENSMUST00000230629.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	74969717	75078771	+	74969717	75078721	A3SS	0.5	50	50	ENSMUST00000230629.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75078863	75079471	+	75078863	75135795	A3SS	0.16	50	50	ENSMUST00000230629.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75135860	75137275	+	75135860	75137279	A3SS	0.5	50	50	ENSMUST00000230629.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75105796	75142935	+	75141486	75142935	A5SS&ES	0.25	50	50	ENSMUST00000230629.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75116081	75135795	+	75078863	75135795	A5SS	0.14	50	50	ENSMUST00000230629.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75133103	75135795	+	75078863	75135795	A5SS	0.14	50	50	ENSMUST00000230629.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75133899	75135795	+	75078863	75135795	A5SS	0.14	50	50	ENSMUST00000230629.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75134690	75135795	+	75078863	75135795	A5SS	0.14	50	50	ENSMUST00000230629.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75135897	75141361	+	75137378	75141361	A5SS&ES	0.25	50	50	ENSMUST00000230629.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75078863	75103411	+	75078863;75079731	75079471;75103411	ES	0.5	50	50	ENSMUST00000229776.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75103587	75135795	+	75103587	75115960	3pMXE	0.25	50	50	ENSMUST00000229776.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75103587	75141361	+	75103587	75115960	3pMXE	0.25	50	50	ENSMUST00000229776.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75103587;75105796	75105634;75115960	+	75103587	75115960	cassetteExon	0.5	100	100	ENSMUST00000229776.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75110357	75115960	+	75103587	75115960	A5SS	0.33	50	50	ENSMUST00000229776.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75116081	75135795	+	75116081;75132010	75131987;75135795	ES	0.14	50	50	ENSMUST00000229092.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75105796;75110357	75110281;75115960	+	75105796	75115960	cassetteExon	0.5	100	100	ENSMUST00000229092.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75132010;75133103	75133021;75135795	+	75132010	75135795	cassetteExon	0.5	100	100	ENSMUST00000229092.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75103587	75115960	+	75105796	75115960	A5SS&ES	0.33	50	50	ENSMUST00000229092.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75103587	75135795	+	75132010	75135795	A5SS&ES	0.14	50	50	ENSMUST00000229092.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75103587	75141361	+	75137378	75141361	A5SS&ES	0.25	50	50	ENSMUST00000229092.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75127960	75131987	+	75116081	75131987	A5SS	0.33	50	50	ENSMUST00000229092.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75133899	75135795	+	75132010	75135795	A5SS	0.14	50	50	ENSMUST00000229092.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75134690	75135795	+	75132010	75135795	A5SS	0.14	50	50	ENSMUST00000229092.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75135858	75137275	+	75135860	75137275	A5SS	0.33	50	50	ENSMUST00000229092.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75135897	75137275	+	75135860	75137275	A5SS	0.33	50	50	ENSMUST00000229092.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75078863	75142935	+	75078863;75141486	75141361;75142935	ES	0.25	50	50	ENSMUST00000186411.3	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75078863;75103587	75103411;75141361	+	75078863	75141361	cassetteExon	0.5	100	100	ENSMUST00000186411.3	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75078863;75135897	75135795;75141361	+	75078863	75141361	cassetteExon	0.5	100	100	ENSMUST00000186411.3	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75078863	75079471	+	75078863	75141361	A3SS	0.16	50	50	ENSMUST00000186411.3	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75078863	75131987	+	75078863	75141361	A3SS	0.16	50	50	ENSMUST00000186411.3	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75137378	75141361	+	75078863	75141361	A5SS	0.25	50	50	ENSMUST00000186411.3	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75137378	75142935	+	75141486	75142935	A5SS&ES	0.25	50	50	ENSMUST00000186411.3	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75078863;75135897	75135795;75141361	+	75078863;75103587	75103411;75141361	MXE	0.5	100	100	ENSMUST00000230065.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75103587;75105796	75105634;75142935	+	75103587;75141486	75141361;75142935	MXE	0.5	100	100	ENSMUST00000230065.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75103587;75135897	75135795;75141361	+	75103587	75141361	cassetteExon	0.5	100	100	ENSMUST00000230065.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75078863	75131987	+	75078863	75103411	A3SS&ES	0.16	50	50	ENSMUST00000230065.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75135897;75137378	75137275;75141361	+	75135897	75141361	cassetteExon	0.5	100	100	ENSMUST00000230865.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75135897;75137378	75137275;75142935	+	75135897;75141486	75141361;75142935	MXE	0.5	100	100	ENSMUST00000230865.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75078863	75141361	+	75135897	75141361	A5SS&ES	0.25	50	50	ENSMUST00000230865.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75078863	75142935	+	75141486	75142935	A5SS&ES	0.25	50	50	ENSMUST00000230865.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75103587	75141361	+	75135897	75141361	A5SS&ES	0.25	50	50	ENSMUST00000230865.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75078863;75132010	75131987;75135795	+	75078863;75116081	75103411;75135795	MXE	0.5	100	100	ENSMUST00000230800.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75133103	75135795	+	75116081	75135795	A5SS	0.14	50	50	ENSMUST00000230800.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75133899	75135795	+	75116081	75135795	A5SS	0.14	50	50	ENSMUST00000230800.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75134690	75135795	+	75116081	75135795	A5SS	0.14	50	50	ENSMUST00000230800.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75135858	75137275	+	75135897	75137275	A5SS	0.33	50	50	ENSMUST00000230800.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75078863;75132010	75131987;75135795	+	75078863;75103587	75103411;75135795	MXE	0.5	100	100	ENSMUST00000230991.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75103587;75105796	75105634;75142935	+	75103587;75141486	75135795;75142935	MXE	0.5	100	100	ENSMUST00000230991.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75103587;75116081	75115960;75135795	+	75103587	75135795	cassetteExon	0.5	100	100	ENSMUST00000230991.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75133103	75135795	+	75103587	75135795	A5SS	0.14	50	50	ENSMUST00000230991.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75133899	75135795	+	75103587	75135795	A5SS	0.14	50	50	ENSMUST00000230991.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75134690	75135795	+	75103587	75135795	A5SS	0.14	50	50	ENSMUST00000230991.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75078863;75141486	75141361;75142935	+	75078863;75105796	75103411;75142935	MXE	0.5	100	100	ENSMUST00000230510.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75078863	75135795	+	75078863	75103411	A3SS&ES	0.16	50	50	ENSMUST00000230510.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75103587	75115960	+	75103587	75105634	A3SS&ES	0.25	50	50	ENSMUST00000230510.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75103587	75135795	+	75103587	75105634	A3SS&ES	0.25	50	50	ENSMUST00000230510.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75105796	75110281	+	75105796	75142935	A3SS	0.33	50	50	ENSMUST00000230510.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75105796	75115960	+	75105796	75142935	A3SS	0.33	50	50	ENSMUST00000230510.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75137378	75142935	+	75105796	75142935	A5SS	0.25	50	50	ENSMUST00000230510.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75078863;75141486	75141361;75142935	+	75078863;75137378	75131987;75142935	MXE	0.5	100	100	ENSMUST00000230015.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75078863	75079471	+	75078863	75131987	A3SS	0.16	50	50	ENSMUST00000230015.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75116081	75131987	+	75078863	75131987	A5SS	0.33	50	50	ENSMUST00000230015.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75116081	75135795	+	75132010	75135795	A5SS&ES	0.14	50	50	ENSMUST00000230015.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75127960	75131987	+	75078863	75131987	A5SS	0.33	50	50	ENSMUST00000230015.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75078863	75079471	+	75078863	75142935	A3SS	0.16	50	50	ENSMUST00000230987.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75078863	75103411	+	75078863	75142935	A3SS	0.16	50	50	ENSMUST00000230987.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75078863	75131987	+	75078863	75142935	A3SS	0.16	50	50	ENSMUST00000230987.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75078863	75135795	+	75078863	75142935	A3SS	0.16	50	50	ENSMUST00000230987.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75105796	75142935	+	75078863	75142935	A5SS	0.25	50	50	ENSMUST00000230987.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75137378	75142935	+	75078863	75142935	A5SS	0.25	50	50	ENSMUST00000230987.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75133103;75134690	75134623;75135795	+	75133103	75135795	cassetteExon	0.5	100	100	ENSMUST00000229528.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75133899	75135795	+	75133103	75135795	A5SS	0.25	50	50	ENSMUST00000229528.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75134690	75135795	+	75133899	75135795	A5SS	0.33	50	50	ENSMUST00000230745.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75137378	75142935	+	75137378	75141361	3pMXE	0.5	50	50	ENSMUST00000229621.2	ENSMUSG00000100303.4	2600014E21Rik	chr2	lncRNA	RIKEN cDNA 2600014E21 gene
chr2	75493100	75494017	+	75493100	75493189	A3SS&ES	0.5	50	50	ENSMUST00000111964.8	ENSMUSG00000059005.14	Hnrnpa3	chr2	protein_coding	heterogeneous nuclear ribonucleoprotein A3
chr2	75489667	75491810	+	75489733	75491810	A5SS	0.5	50	50	ENSMUST00000111964.8	ENSMUSG00000059005.14	Hnrnpa3	chr2	protein_coding	heterogeneous nuclear ribonucleoprotein A3
chr2	75522716	75534708	-	75509773	75534708	A3SS	0.5	50	50	ENSMUST00000102672.5	ENSMUSG00000015839.7	Nfe2l2	chr2	protein_coding	nuclear factor, erythroid derived 2, like 2
chr2	75724501	75733262	+	75724501;75730595	75730526;75733262	ES	0.5	50	50	ENSMUST00000047232.14	ENSMUSG00000042410.17	Agps	chr2	protein_coding	alkylglycerone phosphate synthase
chr2	75662935	75681838	+	75662855	75681838	A5SS	0.5	50	50	ENSMUST00000047232.14	ENSMUSG00000042410.17	Agps	chr2	protein_coding	alkylglycerone phosphate synthase
chr2	75704435	75707815	+	75698757	75707815	A5SS	0.5	50	50	ENSMUST00000047232.14	ENSMUSG00000042410.17	Agps	chr2	protein_coding	alkylglycerone phosphate synthase
chr2	75821631	75848180	-	75821631	75836326	5pMXE	0.5	50	50	ENSMUST00000124825.2	ENSMUSG00000075270.12	Pde11a	chr2	protein_coding	phosphodiesterase 11A
chr2	75943898	75967683	-	75943898;75966803	75966711;75967683	ES	0.5	50	50	ENSMUST00000099992.10	ENSMUSG00000075270.12	Pde11a	chr2	protein_coding	phosphodiesterase 11A
chr2	75858194	75859621	-	75853129	75859621	A3SS	0.5	50	50	ENSMUST00000099992.10	ENSMUSG00000075270.12	Pde11a	chr2	protein_coding	phosphodiesterase 11A
chr2	76237033	76329601	+	76237033	76237865	3pMXE	0.33	50	50	ENSMUST00000133275.2	ENSMUSG00000042359.19	Osbpl6	chr2	protein_coding	oxysterol binding protein-like 6
chr2	76237033	76237519	+	76237033	76237865	A3SS	0.33	50	50	ENSMUST00000133275.2	ENSMUSG00000042359.19	Osbpl6	chr2	protein_coding	oxysterol binding protein-like 6
chr2	76385461	76390530	+	76385461;76386326	76386234;76390530	ES	0.5	50	50	ENSMUST00000077972.11	ENSMUSG00000042359.19	Osbpl6	chr2	protein_coding	oxysterol binding protein-like 6
chr2	76386326	76395128	+	76386326;76390604	76390530;76395128	ES	0.5	50	50	ENSMUST00000077972.11	ENSMUSG00000042359.19	Osbpl6	chr2	protein_coding	oxysterol binding protein-like 6
chr2	76398586	76407356	+	76398586;76399387	76399364;76407356	ES	0.5	50	50	ENSMUST00000077972.11	ENSMUSG00000042359.19	Osbpl6	chr2	protein_coding	oxysterol binding protein-like 6
chr2	76329766;76344500	76344261;76354233	+	76329766	76354233	cassetteExon	0.5	100	100	ENSMUST00000077972.11	ENSMUSG00000042359.19	Osbpl6	chr2	protein_coding	oxysterol binding protein-like 6
chr2	76425230;76425752	76425608;76426218	+	76425230	76426218	cassetteExon	0.5	100	100	ENSMUST00000077972.11	ENSMUSG00000042359.19	Osbpl6	chr2	protein_coding	oxysterol binding protein-like 6
chr2	76237033	76237519	+	76237033	76329601	A3SS	0.33	50	50	ENSMUST00000077972.11	ENSMUSG00000042359.19	Osbpl6	chr2	protein_coding	oxysterol binding protein-like 6
chr2	76370540	76371231	+	76370540	76376322	A3SS	0.5	50	50	ENSMUST00000077972.11	ENSMUSG00000042359.19	Osbpl6	chr2	protein_coding	oxysterol binding protein-like 6
chr2	76409654	76410133	+	76409654	76414805	A3SS	0.5	50	50	ENSMUST00000077972.11	ENSMUSG00000042359.19	Osbpl6	chr2	protein_coding	oxysterol binding protein-like 6
chr2	76329459	76329601	+	76237033	76329601	A5SS	0.5	50	50	ENSMUST00000077972.11	ENSMUSG00000042359.19	Osbpl6	chr2	protein_coding	oxysterol binding protein-like 6
chr2	76398586	76409517	+	76398586;76407463	76407356;76409517	ES	0.5	50	50	ENSMUST00000111929.8	ENSMUSG00000042359.19	Osbpl6	chr2	protein_coding	oxysterol binding protein-like 6
chr2	76385461;76386326	76386234;76395128	+	76385461;76390604	76390530;76395128	MXE	0.5	100	100	ENSMUST00000111930.9	ENSMUSG00000042359.19	Osbpl6	chr2	protein_coding	oxysterol binding protein-like 6
chr2	76398586	76399364	+	76398586	76409517	A3SS	0.33	50	50	ENSMUST00000124601.2	ENSMUSG00000042359.19	Osbpl6	chr2	protein_coding	oxysterol binding protein-like 6
chr2	76478964	76480736	+	76478964	76480787	A3SS	0.5	50	50	ENSMUST00000153471.2	ENSMUSG00000075267.10	Pjvk	chr2	protein_coding	pejvakin
chr2	76496154;76497786	76497671;76502041	-	76496154	76502041	cassetteExon	0.5	100	100	ENSMUST00000002809.14	ENSMUSG00000002732.15	Fkbp7	chr2	protein_coding	FK506 binding protein 7
chr2	76493696	76495460	-	76493696	76496021	A5SS	0.5	50	50	ENSMUST00000002809.14	ENSMUSG00000002732.15	Fkbp7	chr2	protein_coding	FK506 binding protein 7
chr2	76736876	76751895	-	76736876;76740297	76737652;76751895	ES	0.33	50	50	ENSMUST00000011934.13	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76751951;76756323	76755949;76757431	-	76751951	76757431	cassetteExon	0.5	100	100	ENSMUST00000011934.13	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76795572;76796258	76796121;76797398	-	76795572	76797398	cassetteExon	0.5	100	100	ENSMUST00000011934.13	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76733970	76736598	-	76649160	76736598	A3SS	0.5	50	50	ENSMUST00000011934.13	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76750807	76751895	-	76740297	76751895	A3SS	0.33	50	50	ENSMUST00000011934.13	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76649160	76651460	-	76649160	76736598	A5SS	0.16	50	50	ENSMUST00000011934.13	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76649160	76656791	-	76649160	76736598	A5SS	0.16	50	50	ENSMUST00000011934.13	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76649160	76662132	-	76649160	76736598	A5SS	0.16	50	50	ENSMUST00000011934.13	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76649160	76677732	-	76649160	76736598	A5SS	0.16	50	50	ENSMUST00000011934.13	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76649160	76688248	-	76649160	76736598	A5SS	0.16	50	50	ENSMUST00000011934.13	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76658746	76659024	-	76658746;76658913	76658830;76659024	ES	0.5	50	50	ENSMUST00000099981.10	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76662528	76662807	-	76662528;76662695	76662612;76662807	ES	0.5	50	50	ENSMUST00000099981.10	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76662695	76663000	-	76662695;76662890	76662807;76663000	ES	0.5	50	50	ENSMUST00000099981.10	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76663083	76663374	-	76663083;76663277	76663194;76663374	ES	0.5	50	50	ENSMUST00000099981.10	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76675440	76676970	-	76675440;76676657	76676580;76676970	ES	0.5	50	50	ENSMUST00000099981.10	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76663065	76669749	-	76669239	76669749	A3SS&ES	0.5	50	50	ENSMUST00000099981.10	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76671970	76672112	-	76671949	76672112	A3SS	0.5	50	50	ENSMUST00000099981.10	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76679514	76679601	-	76679415	76679601	A3SS	0.5	50	50	ENSMUST00000099981.10	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76694669	76695567	-	76694660	76695567	A3SS	0.5	50	50	ENSMUST00000099981.10	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76724767	76725004	-	76724767	76724968	A5SS	0.5	50	50	ENSMUST00000099981.10	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76649160;76662218	76662132;76662445	-	76649160;76659300	76651460;76662445	MXE	0.5	100	100	ENSMUST00000111882.9	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76657422;76662218	76662132;76662445	-	76657422;76659300	76657827;76662445	MXE	0.5	100	100	ENSMUST00000111882.9	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76649160;76662218	76662132;76677732	-	76649160;76677540	76651460;76677732	MXE	0.5	100	100	ENSMUST00000111882.9	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76657422;76662218	76662132;76677732	-	76657422;76677540	76657827;76677732	MXE	0.5	100	100	ENSMUST00000111882.9	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76662528;76662695	76662612;76663000	-	76662528;76662890	76662807;76663000	MXE	0.5	100	100	ENSMUST00000111882.9	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76656220	76656419	-	76652908	76656419	A3SS	0.5	50	50	ENSMUST00000111882.9	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76661193	76662445	-	76659300	76662445	A3SS	0.33	50	50	ENSMUST00000111882.9	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76740297	76751895	-	76736876	76751895	A3SS	0.33	50	50	ENSMUST00000111882.9	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76750807	76751895	-	76736876	76751895	A3SS	0.33	50	50	ENSMUST00000111882.9	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76652908	76653242	-	76652908	76656419	A5SS	0.5	50	50	ENSMUST00000111882.9	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76659300	76659411	-	76659300	76662445	A5SS	0.5	50	50	ENSMUST00000111882.9	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76736876	76737652	-	76736876	76751895	A5SS	0.5	50	50	ENSMUST00000111882.9	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76660449;76660824	76660560;76660936	-	76660449	76660936	cassetteExon	0.5	100	100	ENSMUST00000134720.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76649160;76662218	76662132;76662445	-	76649160;76661193	76651460;76662445	MXE	0.5	100	100	ENSMUST00000134720.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76657422;76662218	76662132;76662445	-	76657422;76661193	76657827;76662445	MXE	0.5	100	100	ENSMUST00000134720.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76668987	76669156	-	76664062	76669156	A3SS	0.5	50	50	ENSMUST00000134720.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76661193	76661320	-	76661193	76662445	A5SS	0.5	50	50	ENSMUST00000134720.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76664062	76664179	-	76664062	76669156	A5SS	0.5	50	50	ENSMUST00000134720.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76649160	76677732	-	76649160;76662218	76662132;76677732	ES	0.33	50	50	ENSMUST00000148747.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76649160;76688331	76688248;76693144	-	76649160;76690341	76662132;76693144	MXE	0.5	100	100	ENSMUST00000148747.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76678152;76688331	76688248;76693144	-	76678152;76690341	76690258;76693144	MXE	0.5	100	100	ENSMUST00000148747.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76657422	76662132	-	76649160	76662132	A3SS	0.33	50	50	ENSMUST00000148747.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76661787	76662132	-	76649160	76662132	A3SS	0.33	50	50	ENSMUST00000148747.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76677540	76677732	-	76662218	76677732	A3SS	0.33	50	50	ENSMUST00000148747.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76689890	76690258	-	76678152	76690258	A3SS	0.5	50	50	ENSMUST00000148747.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76692771	76693144	-	76690341	76693144	A3SS	0.33	50	50	ENSMUST00000148747.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76649160	76651460	-	76649160	76662132	A5SS	0.2	50	50	ENSMUST00000148747.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76649160	76656791	-	76649160	76662132	A5SS	0.2	50	50	ENSMUST00000148747.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76662218	76662445	-	76662218	76677732	A5SS	0.5	50	50	ENSMUST00000148747.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76678152	76678623	-	76678152	76690258	A5SS	0.2	50	50	ENSMUST00000148747.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76678152	76680914	-	76678152	76690258	A5SS	0.2	50	50	ENSMUST00000148747.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76678152	76684494	-	76678152	76690258	A5SS	0.2	50	50	ENSMUST00000148747.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76690341	76691441	-	76690341	76693144	A5SS	0.5	50	50	ENSMUST00000148747.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76649160;76678152	76677732;76688248	-	76649160	76688248	cassetteExon	0.5	100	100	ENSMUST00000149616.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76688331;76692771	76692694;76693144	-	76688331	76693144	cassetteExon	0.5	100	100	ENSMUST00000149616.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76684811	76688248	-	76649160	76688248	A3SS	0.2	50	50	ENSMUST00000149616.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76686710	76688248	-	76649160	76688248	A3SS	0.2	50	50	ENSMUST00000149616.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76688034	76688248	-	76649160	76688248	A3SS	0.2	50	50	ENSMUST00000149616.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76690341	76693144	-	76688331	76693144	A3SS	0.33	50	50	ENSMUST00000149616.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76649160	76651460	-	76649160	76688248	A5SS	0.2	50	50	ENSMUST00000149616.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76649160	76656791	-	76649160	76688248	A5SS	0.2	50	50	ENSMUST00000149616.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76649160	76662132	-	76649160	76688248	A5SS	0.2	50	50	ENSMUST00000149616.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76688331	76689804	-	76688331	76693144	A5SS	0.33	50	50	ENSMUST00000149616.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76684811	76688248	-	76684811;76686710	76686609;76688248	ES	0.2	50	50	ENSMUST00000152185.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76678152;76690341	76690258;76693144	-	76678152;76692771	76684494;76693144	MXE	0.5	100	100	ENSMUST00000152185.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76677540	76677732	-	76649160	76677732	A3SS	0.33	50	50	ENSMUST00000152185.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76682481	76684494	-	76678152	76684494	A3SS	0.33	50	50	ENSMUST00000152185.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76684272	76684494	-	76678152	76684494	A3SS	0.33	50	50	ENSMUST00000152185.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76688034	76688248	-	76686710	76688248	A3SS	0.2	50	50	ENSMUST00000152185.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76692533	76692694	-	76688331	76692694	A3SS	0.5	50	50	ENSMUST00000152185.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76649160	76651460	-	76649160	76677732	A5SS	0.2	50	50	ENSMUST00000152185.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76649160	76656791	-	76649160	76677732	A5SS	0.2	50	50	ENSMUST00000152185.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76678152	76678623	-	76678152	76684494	A5SS	0.2	50	50	ENSMUST00000152185.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76678152	76680914	-	76678152	76684494	A5SS	0.2	50	50	ENSMUST00000152185.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76686710	76687147	-	76686710	76688248	A5SS	0.5	50	50	ENSMUST00000152185.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76688331	76689804	-	76688331	76692694	A5SS	0.33	50	50	ENSMUST00000152185.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76678152;76684811	76684494;76688248	-	76678152	76688248	cassetteExon	0.5	100	100	ENSMUST00000130915.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76686710	76688248	-	76678152	76688248	A3SS	0.2	50	50	ENSMUST00000130915.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76688034	76688248	-	76678152	76688248	A3SS	0.2	50	50	ENSMUST00000130915.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76678152	76678623	-	76678152	76688248	A5SS	0.2	50	50	ENSMUST00000130915.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76678152	76680914	-	76678152	76688248	A5SS	0.2	50	50	ENSMUST00000130915.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76678152;76690341	76690258;76693144	-	76678152;76688331	76684494;76693144	MXE	0.5	100	100	ENSMUST00000155365.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76688034	76688248	-	76684811	76688248	A3SS	0.2	50	50	ENSMUST00000155365.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76656496	76656791	-	76649160	76656791	A3SS	0.5	50	50	ENSMUST00000128071.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76661787	76662132	-	76657422	76662132	A3SS	0.33	50	50	ENSMUST00000128071.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76680724	76680914	-	76678152	76680914	A3SS	0.5	50	50	ENSMUST00000128071.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76684272	76684494	-	76682481	76684494	A3SS	0.33	50	50	ENSMUST00000128071.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76649160	76651460	-	76649160	76656791	A5SS	0.2	50	50	ENSMUST00000128071.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76657422	76657827	-	76657422	76662132	A5SS	0.5	50	50	ENSMUST00000128071.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76678152	76678623	-	76678152	76680914	A5SS	0.2	50	50	ENSMUST00000128071.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76682481	76683178	-	76682481	76684494	A5SS	0.5	50	50	ENSMUST00000128071.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76659300	76662445	-	76662218	76662445	A3SS&ES	0.33	50	50	ENSMUST00000137854.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76661193	76662445	-	76662218	76662445	A3SS&ES	0.33	50	50	ENSMUST00000137854.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76669826	76670577	-	76662528	76670577	A3SS	0.5	50	50	ENSMUST00000137854.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76662528	76662612	-	76662528	76670577	A5SS	0.33	50	50	ENSMUST00000137854.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76662528	76662807	-	76662528	76670577	A5SS	0.33	50	50	ENSMUST00000137854.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76662528	76662807	-	76662528	76662612	5pMXE	0.33	50	50	ENSMUST00000156257.2	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76795572	76797398	-	76796258	76797398	A3SS	0.5	50	50	ENSMUST00000123804.8	ENSMUSG00000051747.16	Ttn	chr2	protein_coding	titin
chr2	76871888	76875004	-	76871888;76872975	76872787;76875004	ES	0.5	50	50	ENSMUST00000049544.14	ENSMUSG00000044033.17	Ccdc141	chr2	protein_coding	coiled-coil domain containing 141
chr2	76905352	76938707	-	76905352;76919608	76919414;76938707	ES	0.5	50	50	ENSMUST00000049544.14	ENSMUSG00000044033.17	Ccdc141	chr2	protein_coding	coiled-coil domain containing 141
chr2	76962717;76995574	76995411;76998855	-	76962717	76998855	cassetteExon	0.5	100	100	ENSMUST00000049544.14	ENSMUSG00000044033.17	Ccdc141	chr2	protein_coding	coiled-coil domain containing 141
chr2	76992640	76998855	-	76962717	76998855	A3SS	0.33	50	50	ENSMUST00000049544.14	ENSMUSG00000044033.17	Ccdc141	chr2	protein_coding	coiled-coil domain containing 141
chr2	76850373	76852992	-	76850373	76853790	A5SS	0.5	50	50	ENSMUST00000049544.14	ENSMUSG00000044033.17	Ccdc141	chr2	protein_coding	coiled-coil domain containing 141
chr2	76842101	76845294	-	76842101	76844738	A5SS	0.5	50	50	ENSMUST00000164114.9	ENSMUSG00000044033.17	Ccdc141	chr2	protein_coding	coiled-coil domain containing 141
chr2	76871888	76875004	-	76871888	76872787	5pMXE	0.5	50	50	ENSMUST00000175840.2	ENSMUSG00000044033.17	Ccdc141	chr2	protein_coding	coiled-coil domain containing 141
chr2	76992640	76998855	-	76995574	76998855	A3SS&ES	0.33	50	50	ENSMUST00000133503.9	ENSMUSG00000044033.17	Ccdc141	chr2	protein_coding	coiled-coil domain containing 141
chr2	77075430	77110899	-	77075430	77096020	5pMXE	0.5	50	50	ENSMUST00000102660.8	ENSMUSG00000042272.18	Sestd1	chr2	protein_coding	SEC14 and spectrin domains 1
chr2	77246319	77307079	-	77246319;77280657	77280495;77307079	ES	0.33	50	50	ENSMUST00000111830.9	ENSMUSG00000027016.18	Zfp385b	chr2	protein_coding	zinc finger protein 385B
chr2	77334026	77533400	-	77334026	77349772	5pMXE	0.33	50	50	ENSMUST00000111830.9	ENSMUSG00000027016.18	Zfp385b	chr2	protein_coding	zinc finger protein 385B
chr2	77334026	77549795	-	77334026	77349772	5pMXE	0.33	50	50	ENSMUST00000111830.9	ENSMUSG00000027016.18	Zfp385b	chr2	protein_coding	zinc finger protein 385B
chr2	77307189;77311709	77311671;77333884	-	77307189	77333884	cassetteExon	0.5	100	100	ENSMUST00000111830.9	ENSMUSG00000027016.18	Zfp385b	chr2	protein_coding	zinc finger protein 385B
chr2	77301487	77307079	-	77280657	77307079	A3SS	0.33	50	50	ENSMUST00000111830.9	ENSMUSG00000027016.18	Zfp385b	chr2	protein_coding	zinc finger protein 385B
chr2	77334026	77549795	-	77334026	77533400	5pMXE	0.33	50	50	ENSMUST00000171063.8	ENSMUSG00000027016.18	Zfp385b	chr2	protein_coding	zinc finger protein 385B
chr2	77359000	77549795	-	77334026	77549795	A3SS	0.5	50	50	ENSMUST00000090766.12	ENSMUSG00000027016.18	Zfp385b	chr2	protein_coding	zinc finger protein 385B
chr2	77551043	77647383	-	77551043	77646896	5pMXE	0.5	50	50	ENSMUST00000111831.8	ENSMUSG00000027016.18	Zfp385b	chr2	protein_coding	zinc finger protein 385B
chr2	77301487	77307079	-	77246319	77307079	A3SS	0.33	50	50	ENSMUST00000145251.8	ENSMUSG00000027016.18	Zfp385b	chr2	protein_coding	zinc finger protein 385B
chr2	77246319	77307079	-	77280657	77307079	3pMXE	0.33	50	50	ENSMUST00000135756.8	ENSMUSG00000027016.18	Zfp385b	chr2	protein_coding	zinc finger protein 385B
chr2	77359000	77392269	-	77359000	77549795	A5SS	0.5	50	50	ENSMUST00000111829.2	ENSMUSG00000027016.18	Zfp385b	chr2	protein_coding	zinc finger protein 385B
chr2	77293098	77310456	+	77293098;77310076	77309919;77310456	ES	0.5	50	50	ENSMUST00000146495.8	ENSMUSG00000085845.8	Gm13944	chr2	lncRNA	predicted gene 13944
chr2	77738489	77745841	-	77738489;77741914	77741854;77745841	ES	0.5	50	50	ENSMUST00000111824.8	ENSMUSG00000027014.15	Cwc22	chr2	protein_coding	CWC22 spliceosome-associated protein
chr2	77759842;77760266	77760181;77761779	-	77759842	77761779	cassetteExon	0.5	100	100	ENSMUST00000111824.8	ENSMUSG00000027014.15	Cwc22	chr2	protein_coding	CWC22 spliceosome-associated protein
chr2	77767066;77770706	77770646;77776494	-	77767066	77776494	cassetteExon	0.5	100	100	ENSMUST00000111824.8	ENSMUSG00000027014.15	Cwc22	chr2	protein_coding	CWC22 spliceosome-associated protein
chr2	77726922	77734158	-	77711834	77734158	A3SS	0.5	50	50	ENSMUST00000111824.8	ENSMUSG00000027014.15	Cwc22	chr2	protein_coding	CWC22 spliceosome-associated protein
chr2	77761318	77761779	-	77759842	77761779	A3SS	0.33	50	50	ENSMUST00000111824.8	ENSMUSG00000027014.15	Cwc22	chr2	protein_coding	CWC22 spliceosome-associated protein
chr2	77763110	77766937	-	77763107	77766937	A3SS	0.5	50	50	ENSMUST00000111824.8	ENSMUSG00000027014.15	Cwc22	chr2	protein_coding	CWC22 spliceosome-associated protein
chr2	77726922	77734158	-	77726922	77734140	A5SS	0.5	50	50	ENSMUST00000111821.9	ENSMUSG00000027014.15	Cwc22	chr2	protein_coding	CWC22 spliceosome-associated protein
chr2	77770706	77776187	-	77770706	77776494	A5SS	0.5	50	50	ENSMUST00000065889.10	ENSMUSG00000027014.15	Cwc22	chr2	protein_coding	CWC22 spliceosome-associated protein
chr2	77761318	77761779	-	77760266	77761779	A3SS	0.33	50	50	ENSMUST00000149012.8	ENSMUSG00000027014.15	Cwc22	chr2	protein_coding	CWC22 spliceosome-associated protein
chr2	77891644	77893361	+	77891644	78014865	A3SS	0.5	50	50	ENSMUST00000144728.2	ENSMUSG00000085431.8	4930440I19Rik	chr2	lncRNA	RIKEN cDNA 4930440I19 gene
chr2	78698746	78700801	+	78698941	78700801	A5SS	0.25	50	50	ENSMUST00000124120.2	ENSMUSG00000027011.15	Ube2e3	chr2	protein_coding	ubiquitin-conjugating enzyme E2E 3
chr2	78699749	78700801	+	78698941	78700801	A5SS	0.25	50	50	ENSMUST00000124120.2	ENSMUSG00000027011.15	Ube2e3	chr2	protein_coding	ubiquitin-conjugating enzyme E2E 3
chr2	78700362	78700801	+	78698941	78700801	A5SS	0.25	50	50	ENSMUST00000124120.2	ENSMUSG00000027011.15	Ube2e3	chr2	protein_coding	ubiquitin-conjugating enzyme E2E 3
chr2	78699749	78700801	+	78698746	78700801	A5SS	0.25	50	50	ENSMUST00000130914.8	ENSMUSG00000027011.15	Ube2e3	chr2	protein_coding	ubiquitin-conjugating enzyme E2E 3
chr2	78700362	78700801	+	78698746	78700801	A5SS	0.25	50	50	ENSMUST00000130914.8	ENSMUSG00000027011.15	Ube2e3	chr2	protein_coding	ubiquitin-conjugating enzyme E2E 3
chr2	78700362	78700801	+	78699749	78700801	A5SS	0.25	50	50	ENSMUST00000028398.14	ENSMUSG00000027011.15	Ube2e3	chr2	protein_coding	ubiquitin-conjugating enzyme E2E 3
chr2	79086200	79086522	+	79086408	79086522	A5SS	0.5	50	50	ENSMUST00000155105.2	ENSMUSG00000027009.19	Itga4	chr2	protein_coding	integrin alpha 4
chr2	79122483	79123426	+	79122483	79131329	A3SS	0.5	50	50	ENSMUST00000099972.5	ENSMUSG00000027009.19	Itga4	chr2	protein_coding	integrin alpha 4
chr2	79171745	79172506	-	79171745;79171856	79171831;79172506	ES	0.5	50	50	ENSMUST00000099974.10	ENSMUSG00000075256.10	Cerkl	chr2	protein_coding	ceramide kinase-like
chr2	79173635	79191668	-	79173635;79185408	79185266;79191668	ES	0.5	50	50	ENSMUST00000099974.10	ENSMUSG00000075256.10	Cerkl	chr2	protein_coding	ceramide kinase-like
chr2	79185408	79199024	-	79185408;79191731	79191668;79199024	ES	0.5	50	50	ENSMUST00000099974.10	ENSMUSG00000075256.10	Cerkl	chr2	protein_coding	ceramide kinase-like
chr2	79219561	79223287	-	79199155	79223287	A3SS	0.33	50	50	ENSMUST00000099974.10	ENSMUSG00000075256.10	Cerkl	chr2	protein_coding	ceramide kinase-like
chr2	79223529	79259046	-	79223669	79259046	A3SS	0.5	50	50	ENSMUST00000099974.10	ENSMUSG00000075256.10	Cerkl	chr2	protein_coding	ceramide kinase-like
chr2	79199155	79201098	-	79199155	79223287	A5SS	0.5	50	50	ENSMUST00000099974.10	ENSMUSG00000075256.10	Cerkl	chr2	protein_coding	ceramide kinase-like
chr2	79223529	79286895	-	79223529	79259046	5pMXE	0.5	50	50	ENSMUST00000143974.2	ENSMUSG00000075256.10	Cerkl	chr2	protein_coding	ceramide kinase-like
chr2	79185408;79199155	79199024;79223287	-	79185408	79223287	cassetteExon	0.5	100	100	ENSMUST00000143602.8	ENSMUSG00000075256.10	Cerkl	chr2	protein_coding	ceramide kinase-like
chr2	79219561	79223287	-	79185408	79223287	A3SS	0.33	50	50	ENSMUST00000143602.8	ENSMUSG00000075256.10	Cerkl	chr2	protein_coding	ceramide kinase-like
chr2	79173635	79191668	-	79173635	79185266	A5SS&ES	0.5	50	50	ENSMUST00000143602.8	ENSMUSG00000075256.10	Cerkl	chr2	protein_coding	ceramide kinase-like
chr2	79185408	79191668	-	79185408	79223287	A5SS	0.33	50	50	ENSMUST00000143602.8	ENSMUSG00000075256.10	Cerkl	chr2	protein_coding	ceramide kinase-like
chr2	79173635;79191731	79191668;79199024	-	79173635;79185408	79185266;79199024	MXE	0.5	100	100	ENSMUST00000123859.8	ENSMUSG00000075256.10	Cerkl	chr2	protein_coding	ceramide kinase-like
chr2	79285392	79286895	-	79223529	79286895	A3SS	0.5	50	50	ENSMUST00000153602.8	ENSMUSG00000075256.10	Cerkl	chr2	protein_coding	ceramide kinase-like
chr2	79173635	79191668	-	79185408	79191668	3pMXE	0.5	50	50	ENSMUST00000130499.2	ENSMUSG00000075256.10	Cerkl	chr2	protein_coding	ceramide kinase-like
chr2	79219561	79223287	-	79219561	79221299	5pMXE	0.5	50	50	ENSMUST00000145766.2	ENSMUSG00000075256.10	Cerkl	chr2	protein_coding	ceramide kinase-like
chr2	79491348	79492653	+	79491348;79492048	79491983;79492653	ES	0.5	50	50	ENSMUST00000111785.9	ENSMUSG00000027007.17	Itprid2	chr2	protein_coding	ITPR interacting domain containing 2
chr2	79493108	79502103	+	79493108;79501191	79501074;79502103	ES	0.5	50	50	ENSMUST00000111785.9	ENSMUSG00000027007.17	Itprid2	chr2	protein_coding	ITPR interacting domain containing 2
chr2	79590015	79645719	+	79590015	79638646	3pMXE	0.5	50	50	ENSMUST00000090760.9	ENSMUSG00000034683.13	Ppp1r1c	chr2	protein_coding	protein phosphatase 1, regulatory inhibitor subunit 1C
chr2	79538598	79540248	+	79538598	79540243	A3SS	0.5	50	50	ENSMUST00000090760.9	ENSMUSG00000034683.13	Ppp1r1c	chr2	protein_coding	protein phosphatase 1, regulatory inhibitor subunit 1C
chr2	79616994	79638646	+	79590015	79638646	A5SS	0.33	50	50	ENSMUST00000090760.9	ENSMUSG00000034683.13	Ppp1r1c	chr2	protein_coding	protein phosphatase 1, regulatory inhibitor subunit 1C
chr2	79540303	79586798	+	79540303	79638646	A3SS	0.5	50	50	ENSMUST00000040863.11	ENSMUSG00000034683.13	Ppp1r1c	chr2	protein_coding	protein phosphatase 1, regulatory inhibitor subunit 1C
chr2	79590015	79638646	+	79540303	79638646	A5SS	0.33	50	50	ENSMUST00000040863.11	ENSMUSG00000034683.13	Ppp1r1c	chr2	protein_coding	protein phosphatase 1, regulatory inhibitor subunit 1C
chr2	79616994	79638646	+	79540303	79638646	A5SS	0.33	50	50	ENSMUST00000040863.11	ENSMUSG00000034683.13	Ppp1r1c	chr2	protein_coding	protein phosphatase 1, regulatory inhibitor subunit 1C
chr2	79689576	79695382	-	79669345	79695382	A3SS	0.33	50	50	ENSMUST00000102655.10	ENSMUSG00000059173.20	Pde1a	chr2	protein_coding	phosphodiesterase 1A, calmodulin-dependent
chr2	79689740	79695382	-	79669345	79695382	A3SS	0.33	50	50	ENSMUST00000102655.10	ENSMUSG00000059173.20	Pde1a	chr2	protein_coding	phosphodiesterase 1A, calmodulin-dependent
chr2	79695527	79695966	-	79695569	79695966	A3SS	0.5	50	50	ENSMUST00000102655.10	ENSMUSG00000059173.20	Pde1a	chr2	protein_coding	phosphodiesterase 1A, calmodulin-dependent
chr2	79744150	79758019	-	79736516	79758019	A3SS	0.5	50	50	ENSMUST00000102655.10	ENSMUSG00000059173.20	Pde1a	chr2	protein_coding	phosphodiesterase 1A, calmodulin-dependent
chr2	79736516	79737634	-	79736516	79758019	A5SS	0.33	50	50	ENSMUST00000102655.10	ENSMUSG00000059173.20	Pde1a	chr2	protein_coding	phosphodiesterase 1A, calmodulin-dependent
chr2	79736516	79738689	-	79736516	79758019	A5SS	0.33	50	50	ENSMUST00000102655.10	ENSMUSG00000059173.20	Pde1a	chr2	protein_coding	phosphodiesterase 1A, calmodulin-dependent
chr2	79758132	79868802	-	79758132	79959078	A5SS	0.5	50	50	ENSMUST00000102655.10	ENSMUSG00000059173.20	Pde1a	chr2	protein_coding	phosphodiesterase 1A, calmodulin-dependent
chr2	79736516	79738689	-	79736516;79737682	79737634;79738689	ES	0.5	50	50	ENSMUST00000090756.11	ENSMUSG00000059173.20	Pde1a	chr2	protein_coding	phosphodiesterase 1A, calmodulin-dependent
chr2	79689576;79689740	79689714;79695382	-	79689576	79695382	cassetteExon	0.5	100	100	ENSMUST00000090756.11	ENSMUSG00000059173.20	Pde1a	chr2	protein_coding	phosphodiesterase 1A, calmodulin-dependent
chr2	80400573;80401574	80401557;80411202	-	80400573	80411202	cassetteExon	0.5	100	100	ENSMUST00000028386.12	ENSMUSG00000027002.14	Nckap1	chr2	protein_coding	NCK-associated protein 1
chr2	80343101	80350864	-	80343101	80343458	A5SS&ES	0.5	50	50	ENSMUST00000028386.12	ENSMUSG00000027002.14	Nckap1	chr2	protein_coding	NCK-associated protein 1
chr2	80454704	80472969	+	80454704	80461136	3pMXE	0.5	50	50	ENSMUST00000028384.5	ENSMUSG00000027001.11	Dusp19	chr2	protein_coding	dual specificity phosphatase 19
chr2	80451584	80454670	+	80451584	80454552	A3SS	0.5	50	50	ENSMUST00000028384.5	ENSMUSG00000027001.11	Dusp19	chr2	protein_coding	dual specificity phosphatase 19
chr2	80447628	80451538	+	80447950	80451538	A5SS	0.5	50	50	ENSMUST00000028384.5	ENSMUSG00000027001.11	Dusp19	chr2	protein_coding	dual specificity phosphatase 19
chr2	80452144	80454552	+	80451584	80454552	A5SS	0.33	50	50	ENSMUST00000028384.5	ENSMUSG00000027001.11	Dusp19	chr2	protein_coding	dual specificity phosphatase 19
chr2	80453786	80454552	+	80451584	80454552	A5SS	0.33	50	50	ENSMUST00000028384.5	ENSMUSG00000027001.11	Dusp19	chr2	protein_coding	dual specificity phosphatase 19
chr2	80452144	80454552	+	80453786	80454552	A5SS&ES	0.33	50	50	ENSMUST00000148084.2	ENSMUSG00000027001.11	Dusp19	chr2	protein_coding	dual specificity phosphatase 19
chr2	80483339	80486293	+	80483339;80485206	80485137;80486293	ES	0.5	50	50	ENSMUST00000135305.8	ENSMUSG00000026999.15	Nup35	chr2	protein_coding	nucleoporin 35
chr2	80469276	80472969	+	80454704	80472969	A5SS	0.33	50	50	ENSMUST00000135305.8	ENSMUSG00000026999.15	Nup35	chr2	protein_coding	nucleoporin 35
chr2	80469748	80472969	+	80454704	80472969	A5SS	0.33	50	50	ENSMUST00000135305.8	ENSMUSG00000026999.15	Nup35	chr2	protein_coding	nucleoporin 35
chr2	80469748	80472969	+	80469276	80472969	A5SS	0.33	50	50	ENSMUST00000028382.13	ENSMUSG00000026999.15	Nup35	chr2	protein_coding	nucleoporin 35
chr2	82785402	82792068	+	82785402;82789061	82788975;82792068	ES	0.5	50	50	ENSMUST00000143764.9	ENSMUSG00000075249.13	Fsip2	chr2	protein_coding	fibrous sheath-interacting protein 2
chr2	82814126	82828308	+	82814126;82824371	82814713;82828308	ES	0.5	50	50	ENSMUST00000143764.9	ENSMUSG00000075249.13	Fsip2	chr2	protein_coding	fibrous sheath-interacting protein 2
chr2	82814126	82814713	+	82814126	82828308	A3SS	0.5	50	50	ENSMUST00000132967.2	ENSMUSG00000075249.13	Fsip2	chr2	protein_coding	fibrous sheath-interacting protein 2
chr2	82824371	82828308	+	82814126	82828308	A5SS	0.5	50	50	ENSMUST00000132967.2	ENSMUSG00000075249.13	Fsip2	chr2	protein_coding	fibrous sheath-interacting protein 2
chr2	83483803	83488353	+	83483803;83487471	83487360;83488353	ES	0.5	50	50	ENSMUST00000081591.7	ENSMUSG00000027091.15	Zc3h15	chr2	protein_coding	zinc finger CCCH-type containing 15
chr2	83488930	83490402	+	83488965	83490402	A5SS	0.5	50	50	ENSMUST00000081591.7	ENSMUSG00000027091.15	Zc3h15	chr2	protein_coding	zinc finger CCCH-type containing 15
chr2	83483803	83488353	+	83487471	83488353	5pMXE	0.5	50	50	ENSMUST00000145099.2	ENSMUSG00000027091.15	Zc3h15	chr2	protein_coding	zinc finger CCCH-type containing 15
chr2	83555263	83555935	+	83555263	83566854	A3SS	0.33	50	50	ENSMUST00000125360.8	ENSMUSG00000027087.12	Itgav	chr2	protein_coding	integrin alpha V
chr2	83555263	83566857	+	83555263	83566854	A3SS	0.33	50	50	ENSMUST00000125360.8	ENSMUSG00000027087.12	Itgav	chr2	protein_coding	integrin alpha V
chr2	83566984	83568897	+	83566984	83578197	A3SS	0.5	50	50	ENSMUST00000125360.8	ENSMUSG00000027087.12	Itgav	chr2	protein_coding	integrin alpha V
chr2	83555263	83555935	+	83555263	83566857	A3SS	0.33	50	50	ENSMUST00000141725.3	ENSMUSG00000027087.12	Itgav	chr2	protein_coding	integrin alpha V
chr2	83586264	83592212	+	83586264	83596112	A3SS	0.5	50	50	ENSMUST00000111740.9	ENSMUSG00000027087.12	Itgav	chr2	protein_coding	integrin alpha V
chr2	83594041	83596112	+	83586264	83596112	A5SS	0.5	50	50	ENSMUST00000111740.9	ENSMUSG00000027087.12	Itgav	chr2	protein_coding	integrin alpha V
chr2	83633680	83636977	+	83633680	83634249	3pMXE	0.5	50	50	ENSMUST00000125402.8	ENSMUSG00000027087.12	Itgav	chr2	protein_coding	integrin alpha V
chr2	83753346	83753913	-	83751091	83753913	A3SS	0.5	50	50	ENSMUST00000038223.8	ENSMUSG00000034552.9	Zswim2	chr2	protein_coding	zinc finger SWIM-type containing 2
chr2	84207389	84255414	-	84207389;84237930	84237863;84255414	ES	0.5	50	50	ENSMUST00000074262.9	ENSMUSG00000059588.14	Calcrl	chr2	protein_coding	calcitonin receptor-like
chr2	84273269	84274354	-	84264765	84274354	A3SS	0.33	50	50	ENSMUST00000111722.8	ENSMUSG00000027082.16	Tfpi	chr2	protein_coding	tissue factor pathway inhibitor
chr2	84273656	84274354	-	84264765	84274354	A3SS	0.33	50	50	ENSMUST00000111722.8	ENSMUSG00000027082.16	Tfpi	chr2	protein_coding	tissue factor pathway inhibitor
chr2	84274482	84275084	-	84274464	84275084	A3SS	0.5	50	50	ENSMUST00000111722.8	ENSMUSG00000027082.16	Tfpi	chr2	protein_coding	tissue factor pathway inhibitor
chr2	84282939	84288440	-	84282939	84284144	A5SS&ES	0.5	50	50	ENSMUST00000111722.8	ENSMUSG00000027082.16	Tfpi	chr2	protein_coding	tissue factor pathway inhibitor
chr2	84304143	84307035	-	84304143	84304287	5pMXE	0.33	50	50	ENSMUST00000028487.10	ENSMUSG00000027082.16	Tfpi	chr2	protein_coding	tissue factor pathway inhibitor
chr2	84304143	84307085	-	84304143	84304287	5pMXE	0.33	50	50	ENSMUST00000028487.10	ENSMUSG00000027082.16	Tfpi	chr2	protein_coding	tissue factor pathway inhibitor
chr2	84273269	84274354	-	84273656	84274354	A3SS	0.33	50	50	ENSMUST00000150261.8	ENSMUSG00000027082.16	Tfpi	chr2	protein_coding	tissue factor pathway inhibitor
chr2	84304143	84307085	-	84304143	84307035	A5SS	0.33	50	50	ENSMUST00000111711.8	ENSMUSG00000027082.16	Tfpi	chr2	protein_coding	tissue factor pathway inhibitor
chr2	84331971	84361520	-	84331971	84337193	5pMXE	0.5	50	50	ENSMUST00000126679.8	ENSMUSG00000087362.8	Gm13710	chr2	lncRNA	predicted gene 13710
chr2	84433247	84433993	-	84433247;84433618	84433532;84433993	ES	0.33	50	50	ENSMUST00000111696.8	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84456481	84506441	-	84456481	84480665	5pMXE	0.16	50	50	ENSMUST00000111696.8	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84434096;84435590	84435528;84438673	-	84434096	84438673	cassetteExon	0.5	100	100	ENSMUST00000111696.8	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84442436;84442893	84442876;84443280	-	84442436	84443280	cassetteExon	0.5	100	100	ENSMUST00000111696.8	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84433244	84433993	-	84433618	84433993	A3SS&ES	0.33	50	50	ENSMUST00000111696.8	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84454793	84456364	-	84454902	84456364	A3SS	0.5	50	50	ENSMUST00000111696.8	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84452426	84480750	-	84452426	84454614	A5SS&ES	0.33	50	50	ENSMUST00000111696.8	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84454902	84480750	-	84454902	84456364	A5SS&ES	0.5	50	50	ENSMUST00000111696.8	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84456481	84468343	-	84456481	84480665	A5SS	0.16	50	50	ENSMUST00000111696.8	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84456481	84478675	-	84456481	84480665	A5SS	0.16	50	50	ENSMUST00000111696.8	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84456481	84479774	-	84456481	84480665	A5SS	0.16	50	50	ENSMUST00000111696.8	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84456481	84480750	-	84456481	84480665	A5SS	0.16	50	50	ENSMUST00000111696.8	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84452426;84454793	84454614;84480750	-	84452426	84480750	cassetteExon	0.5	100	100	ENSMUST00000111678.8	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84452426;84454902	84454614;84480750	-	84452426	84480750	cassetteExon	0.5	100	100	ENSMUST00000111678.8	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84456481	84480750	-	84452426	84480750	A3SS	0.25	50	50	ENSMUST00000111678.8	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84447287	84480665	-	84447287	84450263	A5SS&ES	0.5	50	50	ENSMUST00000111678.8	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84452426	84480665	-	84452426	84480750	A5SS	0.33	50	50	ENSMUST00000111678.8	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84454793;84456481	84456364;84480750	-	84454793	84480750	cassetteExon	0.5	100	100	ENSMUST00000111690.8	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84433244	84433993	-	84433247	84433993	A3SS	0.33	50	50	ENSMUST00000111690.8	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84454902	84480750	-	84454793	84480750	A3SS	0.25	50	50	ENSMUST00000111690.8	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84452426	84480665	-	84452426	84454614	A5SS&ES	0.33	50	50	ENSMUST00000111690.8	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84456481	84480665	-	84452426	84480665	A3SS	0.33	50	50	ENSMUST00000111698.8	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84452426	84480665	-	84447287	84480665	A3SS	0.33	50	50	ENSMUST00000111675.8	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84456481	84480665	-	84447287	84480665	A3SS	0.33	50	50	ENSMUST00000111675.8	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84454902	84480750	-	84454902;84456481	84456364;84480750	ES	0.25	50	50	ENSMUST00000067232.10	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84456481	84506441	-	84456481	84480750	5pMXE	0.16	50	50	ENSMUST00000067232.10	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84454793	84480750	-	84456481	84480750	A3SS&ES	0.25	50	50	ENSMUST00000067232.10	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84456481	84468343	-	84456481	84480750	A5SS	0.16	50	50	ENSMUST00000067232.10	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84456481	84478675	-	84456481	84480750	A5SS	0.16	50	50	ENSMUST00000067232.10	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84456481	84479774	-	84456481	84480750	A5SS	0.16	50	50	ENSMUST00000067232.10	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84454902	84480750	-	84456481	84480750	A3SS&ES	0.25	50	50	ENSMUST00000111686.8	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84454793	84480750	-	84454793	84456364	A5SS&ES	0.5	50	50	ENSMUST00000111688.8	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84456481	84506441	-	84456481	84479774	5pMXE	0.16	50	50	ENSMUST00000036811.13	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84456481	84468343	-	84456481	84479774	A5SS	0.16	50	50	ENSMUST00000036811.13	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84456481	84478675	-	84456481	84479774	A5SS	0.16	50	50	ENSMUST00000036811.13	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84442436	84443280	-	84442436	84442876	5pMXE	0.5	50	50	ENSMUST00000131926.2	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84456481	84478675	-	84456481	84468343	5pMXE	0.16	50	50	ENSMUST00000126092.8	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84456481	84506441	-	84456481	84468343	5pMXE	0.16	50	50	ENSMUST00000126092.8	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84456481	84506441	-	84456481	84478675	5pMXE	0.16	50	50	ENSMUST00000149317.2	ENSMUSG00000034101.15	Ctnnd1	chr2	protein_coding	catenin (cadherin associated protein), delta 1
chr2	84503497	84506441	-	84456481	84506441	A3SS	0.2	50	50	ENSMUST00000189772.2	ENSMUSG00000101645.2	Gm28635	chr2	protein_coding	predicted gene 28635
chr2	84503950	84506441	-	84456481	84506441	A3SS	0.2	50	50	ENSMUST00000189772.2	ENSMUSG00000101645.2	Gm28635	chr2	protein_coding	predicted gene 28635
chr2	84505825	84506441	-	84456481	84506441	A3SS	0.2	50	50	ENSMUST00000189772.2	ENSMUSG00000101645.2	Gm28635	chr2	protein_coding	predicted gene 28635
chr2	84506202	84506441	-	84456481	84506441	A3SS	0.2	50	50	ENSMUST00000189772.2	ENSMUSG00000101645.2	Gm28635	chr2	protein_coding	predicted gene 28635
chr2	84490525;84491503	84491392;84491775	+	84490525	84491775	cassetteExon	0.5	100	100	ENSMUST00000144684.8	ENSMUSG00000086598.10	Btbd18	chr2	protein_coding	BTB (POZ) domain containing 18
chr2	84499741	84500356	-	84499741	84500331	A5SS	0.33	50	50	ENSMUST00000117299.10	ENSMUSG00000076437.12	Selenoh	chr2	protein_coding	selenoprotein H
chr2	84499741	84500393	-	84499741	84500331	A5SS	0.33	50	50	ENSMUST00000117299.10	ENSMUSG00000076437.12	Selenoh	chr2	protein_coding	selenoprotein H
chr2	84500460	84500617	-	84500460	84500589	A5SS	0.5	50	50	ENSMUST00000117299.10	ENSMUSG00000076437.12	Selenoh	chr2	protein_coding	selenoprotein H
chr2	84499741	84500393	-	84499741	84500356	A5SS	0.33	50	50	ENSMUST00000102647.11	ENSMUSG00000076437.12	Selenoh	chr2	protein_coding	selenoprotein H
chr2	84503950	84506441	-	84503950;84505825	84505749;84506441	ES	0.25	50	50	ENSMUST00000111664.8	ENSMUSG00000050043.17	Tmx2	chr2	protein_coding	thioredoxin-related transmembrane protein 2
chr2	84505825;84506202	84506089;84506441	-	84505825	84506441	cassetteExon	0.5	100	100	ENSMUST00000111664.8	ENSMUSG00000050043.17	Tmx2	chr2	protein_coding	thioredoxin-related transmembrane protein 2
chr2	84508518	84509437	-	84508518	84508987	5pMXE	0.5	50	50	ENSMUST00000111665.8	ENSMUSG00000050043.17	Tmx2	chr2	protein_coding	thioredoxin-related transmembrane protein 2
chr2	84503497;84503950	84503598;84506441	-	84503497	84506441	cassetteExon	0.5	100	100	ENSMUST00000123772.8	ENSMUSG00000050043.17	Tmx2	chr2	protein_coding	thioredoxin-related transmembrane protein 2
chr2	84505825	84506441	-	84503497	84506441	A3SS	0.25	50	50	ENSMUST00000123772.8	ENSMUSG00000050043.17	Tmx2	chr2	protein_coding	thioredoxin-related transmembrane protein 2
chr2	84506202	84506441	-	84503497	84506441	A3SS	0.25	50	50	ENSMUST00000123772.8	ENSMUSG00000050043.17	Tmx2	chr2	protein_coding	thioredoxin-related transmembrane protein 2
chr2	84503950;84506202	84505749;84506441	-	84503950	84506441	cassetteExon	0.5	100	100	ENSMUST00000138529.2	ENSMUSG00000050043.17	Tmx2	chr2	protein_coding	thioredoxin-related transmembrane protein 2
chr2	84516043	84516553	+	84516043	84516535	A3SS	0.5	50	50	ENSMUST00000102645.4	ENSMUSG00000027080.7	Med19	chr2	protein_coding	mediator complex subunit 19
chr2	84541816;84543978	84543847;84545327	-	84541816	84545327	cassetteExon	0.5	100	100	ENSMUST00000035840.6	ENSMUSG00000034075.11	Zdhhc5	chr2	protein_coding	zinc finger, DHHC domain containing 5
chr2	84541816	84544822	-	84541816	84545327	A5SS	0.33	50	50	ENSMUST00000035840.6	ENSMUSG00000034075.11	Zdhhc5	chr2	protein_coding	zinc finger, DHHC domain containing 5
chr2	84541816	84543847	-	84541816	84544822	A5SS	0.33	50	50	ENSMUST00000138171.2	ENSMUSG00000034075.11	Zdhhc5	chr2	protein_coding	zinc finger, DHHC domain containing 5
chr2	84554561	84557507	-	84554561;84556500	84555873;84557507	ES	0.5	50	50	ENSMUST00000165219.8	ENSMUSG00000027079.16	Clp1	chr2	protein_coding	CLP1, cleavage and polyadenylation factor I subunit
chr2	84556500	84557507	-	84554561	84557507	A3SS	0.5	50	50	ENSMUST00000138231.2	ENSMUSG00000027079.16	Clp1	chr2	protein_coding	CLP1, cleavage and polyadenylation factor I subunit
chr2	84554561	84555873	-	84554561	84557507	A5SS	0.5	50	50	ENSMUST00000138231.2	ENSMUSG00000027079.16	Clp1	chr2	protein_coding	CLP1, cleavage and polyadenylation factor I subunit
chr2	84567309	84567764	+	84567309;84567451	84567408;84567764	ES	0.5	50	50	ENSMUST00000238573.2	ENSMUSG00000034059.15	Ypel4	chr2	protein_coding	yippee like 4
chr2	84564637	84565345	+	84564637	84567074	A3SS	0.33	50	50	ENSMUST00000238573.2	ENSMUSG00000034059.15	Ypel4	chr2	protein_coding	yippee like 4
chr2	84564637	84566983	+	84564637	84567074	A3SS	0.33	50	50	ENSMUST00000238573.2	ENSMUSG00000034059.15	Ypel4	chr2	protein_coding	yippee like 4
chr2	84564637	84565345	+	84564637	84566983	A3SS	0.33	50	50	ENSMUST00000090729.9	ENSMUSG00000034059.15	Ypel4	chr2	protein_coding	yippee like 4
chr2	84567309	84567764	+	84567309	84567408	A3SS	0.5	50	50	ENSMUST00000151647.2	ENSMUSG00000034059.15	Ypel4	chr2	protein_coding	yippee like 4
chr2	84596374	84600118	-	84597838	84600118	A3SS&ES	0.5	50	50	ENSMUST00000023994.10	ENSMUSG00000023224.13	Serping1	chr2	protein_coding	serine (or cysteine) peptidase inhibitor, clade G, member 1
chr2	84605151	84605707	-	84605158	84605707	A3SS	0.5	50	50	ENSMUST00000023994.10	ENSMUSG00000023224.13	Serping1	chr2	protein_coding	serine (or cysteine) peptidase inhibitor, clade G, member 1
chr2	84633218;84633864	84633772;84636681	+	84633218	84636681	cassetteExon	0.5	100	100	ENSMUST00000102642.9	ENSMUSG00000027078.15	Ube2l6	chr2	protein_coding	ubiquitin-conjugating enzyme E2L 6
chr2	84657852	84657943	+	84657491	84657943	A5SS	0.5	50	50	ENSMUST00000028470.10	ENSMUSG00000027076.11	Timm10	chr2	protein_coding	translocase of inner mitochondrial membrane 10
chr2	84669849	84671183	+	84670025	84671183	A5SS	0.33	50	50	ENSMUST00000121114.8	ENSMUSG00000027075.17	Slc43a1	chr2	protein_coding	solute carrier family 43, member 1
chr2	84670838	84671183	+	84670025	84671183	A5SS	0.33	50	50	ENSMUST00000121114.8	ENSMUSG00000027075.17	Slc43a1	chr2	protein_coding	solute carrier family 43, member 1
chr2	84670838	84671183	+	84669849	84671183	A5SS	0.33	50	50	ENSMUST00000146816.8	ENSMUSG00000027075.17	Slc43a1	chr2	protein_coding	solute carrier family 43, member 1
chr2	84711213	84716618	-	84711213	84717006	A5SS	0.5	50	50	ENSMUST00000151799.8	ENSMUSG00000050896.13	Rtn4rl2	chr2	protein_coding	reticulon 4 receptor-like 2
chr2	84766988	84767906	+	84766988	84767867	A3SS	0.5	50	50	ENSMUST00000130278.2	ENSMUSG00000027074.15	Slc43a3	chr2	protein_coding	solute carrier family 43, member 3
chr2	84767193	84767867	+	84766988	84767867	A5SS	0.33	50	50	ENSMUST00000130278.2	ENSMUSG00000027074.15	Slc43a3	chr2	protein_coding	solute carrier family 43, member 3
chr2	84767203	84767867	+	84766988	84767867	A5SS	0.33	50	50	ENSMUST00000130278.2	ENSMUSG00000027074.15	Slc43a3	chr2	protein_coding	solute carrier family 43, member 3
chr2	84767193	84767906	+	84766988	84767906	A5SS	0.5	50	50	ENSMUST00000138719.8	ENSMUSG00000027074.15	Slc43a3	chr2	protein_coding	solute carrier family 43, member 3
chr2	84767193	84767867	+	84767193	84767906	A3SS	0.5	50	50	ENSMUST00000141650.8	ENSMUSG00000027074.15	Slc43a3	chr2	protein_coding	solute carrier family 43, member 3
chr2	84767203	84767867	+	84767193	84767867	A5SS	0.33	50	50	ENSMUST00000090726.6	ENSMUSG00000027074.15	Slc43a3	chr2	protein_coding	solute carrier family 43, member 3
chr2	84819136;84819876	84819569;84821746	+	84819136	84821746	cassetteExon	0.5	100	100	ENSMUST00000135939.2	ENSMUSG00000027072.14	Prg3	chr2	protein_coding	proteoglycan 3
chr2	84818645	84819003	+	84818645	84819064	A3SS	0.5	50	50	ENSMUST00000135939.2	ENSMUSG00000027072.14	Prg3	chr2	protein_coding	proteoglycan 3
chr2	84854517	84855200	-	84854517;84854797	84854726;84855200	ES	0.5	50	50	ENSMUST00000028465.14	ENSMUSG00000027071.15	P2rx3	chr2	protein_coding	purinergic receptor P2X, ligand-gated ion channel, 3
chr2	84853920	84854460	-	84853920	84854454	A5SS	0.5	50	50	ENSMUST00000028465.14	ENSMUSG00000027071.15	P2rx3	chr2	protein_coding	purinergic receptor P2X, ligand-gated ion channel, 3
chr2	84855335	84862865	-	84855335	84865525	A5SS	0.5	50	50	ENSMUST00000028465.14	ENSMUSG00000027071.15	P2rx3	chr2	protein_coding	purinergic receptor P2X, ligand-gated ion channel, 3
chr2	84868882	84869574	+	84868882	84870218	A3SS	0.5	50	50	ENSMUST00000077798.13	ENSMUSG00000027067.17	Ssrp1	chr2	protein_coding	structure specific recognition protein 1
chr2	84867874	84868138	+	84867672	84868138	A5SS	0.5	50	50	ENSMUST00000077798.13	ENSMUSG00000027067.17	Ssrp1	chr2	protein_coding	structure specific recognition protein 1
chr2	84882899;84884696	84884627;84888470	+	84882899	84888470	cassetteExon	0.5	100	100	ENSMUST00000151092.8	ENSMUSG00000033955.14	Tnks1bp1	chr2	protein_coding	tankyrase 1 binding protein 1
chr2	84882899	84888404	+	84882899	84888470	A3SS	0.33	50	50	ENSMUST00000151092.8	ENSMUSG00000033955.14	Tnks1bp1	chr2	protein_coding	tankyrase 1 binding protein 1
chr2	84891548	84892232	+	84889831	84892232	A5SS	0.5	50	50	ENSMUST00000151092.8	ENSMUSG00000033955.14	Tnks1bp1	chr2	protein_coding	tankyrase 1 binding protein 1
chr2	84882899	84888404	+	84882899	84884627	A3SS&ES	0.33	50	50	ENSMUST00000111605.9	ENSMUSG00000033955.14	Tnks1bp1	chr2	protein_coding	tankyrase 1 binding protein 1
chr2	84991207	85020739	+	84991207	85004082	3pMXE	0.5	50	50	ENSMUST00000155472.8	ENSMUSG00000085135.8	Lrrc55os	chr2	lncRNA	predicted gene 13713
chr2	85162242;85165384	85165212;85166249	-	85162242	85166249	cassetteExon	0.5	100	100	ENSMUST00000216347.2	ENSMUSG00000075223.5	Olfr987	chr2	protein_coding	olfactory receptor 987
chr2	85184270;85190036	85190002;85193200	-	85184270	85193200	cassetteExon	0.5	100	100	ENSMUST00000111597.3	ENSMUSG00000075222.6	Olfr988	chr2	protein_coding	olfactory receptor 988
chr2	85230898	85233514	-	85230898;85233422	85233326;85233514	ES	0.5	50	50	ENSMUST00000214895.3	ENSMUSG00000075221.4	Olfr992	chr2	protein_coding	olfactory receptor 992
chr2	85233671	85238457	-	85233671	85238336	A5SS	0.5	50	50	ENSMUST00000214895.3	ENSMUSG00000075221.4	Olfr992	chr2	protein_coding	olfactory receptor 992
chr2	85261184	85266425	-	85261010	85266425	A3SS	0.5	50	50	ENSMUST00000215758.2	ENSMUSG00000075219.4	Olfr994	chr2	protein_coding	olfactory receptor 994
chr2	85261184	85266619	-	85261184	85266425	A5SS	0.5	50	50	ENSMUST00000214679.2	ENSMUSG00000075219.4	Olfr994	chr2	protein_coding	olfactory receptor 994
chr2	85439266	85442219	-	85439266	85442071	5pMXE	0.5	50	50	ENSMUST00000216571.2	ENSMUSG00000075215.3	Olfr1000	chr2	protein_coding	olfactory receptor 1000
chr2	85505509	85509054	-	85505509	85508690	5pMXE	0.5	50	50	ENSMUST00000216084.2	ENSMUSG00000075211.5	Olfr1006	chr2	protein_coding	olfactory receptor 1006
chr2	85550058	85551942	+	85550058	85551736	A3SS	0.5	50	50	ENSMUST00000216443.3	ENSMUSG00000043226.6	Olfr1009	chr2	protein_coding	olfactory receptor 1009
chr2	85590736	85591372	-	85590736	85593075	A5SS	0.5	50	50	ENSMUST00000214958.2	ENSMUSG00000075210.5	Olfr1012	chr2	protein_coding	olfactory receptor 1012
chr2	85612440	85615754	+	85612440	85615867	A3SS	0.5	50	50	ENSMUST00000214726.2	ENSMUSG00000033850.6	Olfr1015	chr2	protein_coding	olfactory receptor 1015
chr2	85630630	85632860	-	85630670	85632860	A3SS	0.5	50	50	ENSMUST00000217410.3	ENSMUSG00000075209.4	Olfr1016	chr2	protein_coding	olfactory receptor 1016
chr2	85752112	85753584	+	85751982	85753584	A5SS	0.5	50	50	ENSMUST00000219615.2	ENSMUSG00000042863.6	Olfr1026	chr2	protein_coding	olfactory receptor 1026
chr2	85837059	85838089	+	85835895	85838089	A5SS	0.5	50	50	ENSMUST00000111589.3	ENSMUSG00000042796.3	Olfr1032	chr2	protein_coding	olfactory receptor 1032
chr2	85851074	85871619	+	85851134	85871619	A5SS	0.25	50	50	ENSMUST00000213774.2	ENSMUSG00000045392.9	Olfr1033	chr2	protein_coding	olfactory receptor 1033
chr2	85865238	85871619	+	85851134	85871619	A5SS	0.25	50	50	ENSMUST00000213774.2	ENSMUSG00000045392.9	Olfr1033	chr2	protein_coding	olfactory receptor 1033
chr2	85868966	85871619	+	85851134	85871619	A5SS	0.25	50	50	ENSMUST00000213774.2	ENSMUSG00000045392.9	Olfr1033	chr2	protein_coding	olfactory receptor 1033
chr2	85851074	85871619	+	85851074;85865238	85865121;85871619	ES	0.25	50	50	ENSMUST00000214546.2	ENSMUSG00000045392.9	Olfr1033	chr2	protein_coding	olfactory receptor 1033
chr2	85868966	85871619	+	85865238	85871619	A5SS	0.25	50	50	ENSMUST00000214546.2	ENSMUSG00000045392.9	Olfr1033	chr2	protein_coding	olfactory receptor 1033
chr2	85868966	85871619	+	85851074	85871619	A5SS	0.25	50	50	ENSMUST00000215682.2	ENSMUSG00000045392.9	Olfr1033	chr2	protein_coding	olfactory receptor 1033
chr2	85851074	85871619	+	85865238	85871619	5pMXE	0.25	50	50	ENSMUST00000213865.2	ENSMUSG00000045392.9	Olfr1033	chr2	protein_coding	olfactory receptor 1033
chr2	85917367	85917652	-	85917367	85917507	A5SS	0.5	50	50	ENSMUST00000216886.2	ENSMUSG00000075205.6	Olfr1037	chr2	protein_coding	olfactory receptor 1037
chr2	85917113	85917652	-	85917367	85917652	A3SS	0.5	50	50	ENSMUST00000213333.2	ENSMUSG00000075205.6	Olfr1037	chr2	protein_coding	olfactory receptor 1037
chr2	85964476	85966229	-	85964476;85965423	85965183;85966229	ES	0.5	50	50	ENSMUST00000216566.3	ENSMUSG00000075204.4	Olfr1039	chr2	protein_coding	olfactory receptor 1039
chr2	85994065	85997204	-	85994168	85997204	A3SS	0.33	50	50	ENSMUST00000213949.2	ENSMUSG00000075201.3	Olfr1043	chr2	protein_coding	olfactory receptor 1043
chr2	85994214	85997204	-	85994168	85997204	A3SS	0.33	50	50	ENSMUST00000213949.2	ENSMUSG00000075201.3	Olfr1043	chr2	protein_coding	olfactory receptor 1043
chr2	85994214	85997204	-	85994065	85997204	A3SS	0.33	50	50	ENSMUST00000213886.2	ENSMUSG00000075201.3	Olfr1043	chr2	protein_coding	olfactory receptor 1043
chr2	86000655	86001795	-	86001321	86001795	A3SS	0.5	50	50	ENSMUST00000215285.2	ENSMUSG00000075200.3	Olfr1044	chr2	protein_coding	olfactory receptor 1044
chr2	86028997	86033174	-	86029113	86033174	A3SS	0.5	50	50	ENSMUST00000215763.2	ENSMUSG00000075198.3	Olfr1045	chr2	protein_coding	olfactory receptor 1045
chr2	86108433	86109409	-	86108433	86109290	5pMXE	0.33	50	50	ENSMUST00000217294.2	ENSMUSG00000075193.3	Olfr1051	chr2	protein_coding	olfactory receptor 1051
chr2	86108433	86109324	-	86108433	86109290	A5SS	0.33	50	50	ENSMUST00000217294.2	ENSMUSG00000075193.3	Olfr1051	chr2	protein_coding	olfactory receptor 1051
chr2	86108433	86109409	-	86108433	86109324	5pMXE	0.33	50	50	ENSMUST00000217245.2	ENSMUSG00000075193.3	Olfr1051	chr2	protein_coding	olfactory receptor 1051
chr2	86127255	86128147	+	86123061	86128147	A5SS	0.5	50	50	ENSMUST00000217166.2	ENSMUSG00000047149.6	Olfr1052	chr2	protein_coding	olfactory receptor 1052
chr2	86178131	86180349	-	86178131	86180605	A5SS	0.5	50	50	ENSMUST00000099894.5	ENSMUSG00000075189.6	Olfr1055	chr2	protein_coding	olfactory receptor 1055
chr2	86254029	86256655	-	86253921	86256655	A3SS	0.5	50	50	ENSMUST00000216166.2	ENSMUSG00000090059.5	Olfr1062	chr2	protein_coding	olfactory receptor 1062
chr2	86276347	86278120	-	86276342	86278120	A3SS	0.33	50	50	ENSMUST00000216162.3	ENSMUSG00000111306.3	Olfr1065	chr2	protein_coding	olfactory receptor 1065
chr2	86276367	86278120	-	86276342	86278120	A3SS	0.33	50	50	ENSMUST00000216162.3	ENSMUSG00000111306.3	Olfr1065	chr2	protein_coding	olfactory receptor 1065
chr2	86276347	86278120	-	86276367	86278120	A3SS	0.33	50	50	ENSMUST00000217586.3	ENSMUSG00000111306.3	Olfr1065	chr2	protein_coding	olfactory receptor 1065
chr2	86370419	86372715	-	86370419	86372797	A5SS	0.5	50	50	ENSMUST00000216480.2	ENSMUSG00000075179.4	Olfr1079	chr2	protein_coding	olfactory receptor 1079
chr2	86488818	86492045	-	86488818;86489593	86489519;86492045	ES	0.5	50	50	ENSMUST00000213279.2	ENSMUSG00000075176.4	Olfr1085	chr2	protein_coding	olfactory receptor 1085
chr2	86585084	86589301	-	86585084	86589213	5pMXE	0.5	50	50	ENSMUST00000215991.2	ENSMUSG00000075172.4	Olfr1090	chr2	protein_coding	olfactory receptor 1090
chr2	86612925	86615940	+	86612925;86615341	86615226;86615940	ES	0.5	50	50	ENSMUST00000213354.2	ENSMUSG00000047969.6	Olfr1093	chr2	protein_coding	olfactory receptor 1093
chr2	86721528	86722543	-	86721528	86722244	5pMXE	0.5	50	50	ENSMUST00000111576.3	ENSMUSG00000075170.5	Olfr1097	chr2	protein_coding	olfactory receptor 1097
chr2	86853895	86857065	-	86853791	86857065	A3SS	0.5	50	50	ENSMUST00000214857.2	ENSMUSG00000075166.3	Olfr1104	chr2	protein_coding	olfactory receptor 1104
chr2	86879601	86882492	-	86879598	86882492	A3SS	0.5	50	50	ENSMUST00000213781.2	ENSMUSG00000075164.3	Olfr1106	chr2	protein_coding	olfactory receptor 1106
chr2	86923865;86924980	86924882;86926296	-	86923865	86926296	cassetteExon	0.5	100	100	ENSMUST00000217066.3	ENSMUSG00000075161.4	Olfr1109	chr2	protein_coding	olfactory receptor 1109
chr2	86939331	86941948	-	86939331	86940192	5pMXE	0.33	50	50	ENSMUST00000215828.3	ENSMUSG00000075160.4	Olfr259	chr2	protein_coding	olfactory receptor 259
chr2	86939331	86944886	-	86939331	86940192	5pMXE	0.33	50	50	ENSMUST00000215828.3	ENSMUSG00000075160.4	Olfr259	chr2	protein_coding	olfactory receptor 259
chr2	86939331	86944886	-	86939331	86941948	5pMXE	0.33	50	50	ENSMUST00000213978.2	ENSMUSG00000075160.4	Olfr259	chr2	protein_coding	olfactory receptor 259
chr2	86981100	86982909	-	86981100	86982392	5pMXE	0.5	50	50	ENSMUST00000214492.3	ENSMUSG00000075158.6	Olfr1111	chr2	protein_coding	olfactory receptor 1111
chr2	87078445	87082184	+	87078445;87081009	87080673;87082184	ES	0.5	50	50	ENSMUST00000214119.2	ENSMUSG00000070856.6	Olfr1115	chr2	protein_coding	olfactory receptor 1115
chr2	87078445	87082184	+	87078445	87080673	A3SS	0.5	50	50	ENSMUST00000213513.2	ENSMUSG00000070856.6	Olfr1115	chr2	protein_coding	olfactory receptor 1115
chr2	87247083	87248416	+	87247075	87248416	A5SS	0.5	50	50	ENSMUST00000214663.2	ENSMUSG00000043274.5	Olfr1123	chr2	protein_coding	olfactory receptor 1123
chr2	87321749	87327191	-	87321749	87322479	5pMXE	0.5	50	50	ENSMUST00000026957.4	ENSMUSG00000025839.4	Pramel7	chr2	protein_coding	PRAME like 7
chr2	87321749	87327191	-	87321749;87322537	87322479;87327191	ES	0.33	50	50	ENSMUST00000138293.2	ENSMUSG00000025839.4	Pramel7	chr2	protein_coding	PRAME like 7
chr2	87322788	87327191	-	87322537	87327191	A3SS	0.33	50	50	ENSMUST00000138293.2	ENSMUSG00000025839.4	Pramel7	chr2	protein_coding	PRAME like 7
chr2	87321749;87322788	87322479;87327191	-	87321749	87327191	cassetteExon	0.5	100	100	ENSMUST00000148030.2	ENSMUSG00000025839.4	Pramel7	chr2	protein_coding	PRAME like 7
chr2	87336973	87338775	+	87336973;87337481	87337244;87338775	ES	0.33	50	50	ENSMUST00000148582.8	ENSMUSG00000025838.13	Pramel6	chr2	protein_coding	PRAME like 6
chr2	87336973	87337418	+	87336973	87337244	A3SS	0.33	50	50	ENSMUST00000148582.8	ENSMUSG00000025838.13	Pramel6	chr2	protein_coding	PRAME like 6
chr2	87337975	87338775	+	87337481	87338775	A5SS	0.33	50	50	ENSMUST00000148582.8	ENSMUSG00000025838.13	Pramel6	chr2	protein_coding	PRAME like 6
chr2	87336973;87337481	87337418;87338775	+	87336973	87338775	cassetteExon	0.5	100	100	ENSMUST00000138504.8	ENSMUSG00000025838.13	Pramel6	chr2	protein_coding	PRAME like 6
chr2	87337975	87338775	+	87336973	87338775	A5SS	0.33	50	50	ENSMUST00000138504.8	ENSMUSG00000025838.13	Pramel6	chr2	protein_coding	PRAME like 6
chr2	87404326	87405273	+	87404326	87405430	A3SS	0.5	50	50	ENSMUST00000213315.2	ENSMUSG00000062272.5	Olfr1129	chr2	protein_coding	olfactory receptor 1129
chr2	87436633	87437583	+	87436633	87437632	A3SS	0.5	50	50	ENSMUST00000213103.3	ENSMUSG00000059205.6	Olfr1130	chr2	protein_coding	olfactory receptor 1130
chr2	87457489	87458796	+	87457489	87459131	A3SS	0.5	50	50	ENSMUST00000216756.3	ENSMUSG00000068819.4	Olfr1131	chr2	protein_coding	olfactory receptor 1131
chr2	87487281	87488690	-	87487281	87488779	A5SS	0.5	50	50	ENSMUST00000135875.4	ENSMUSG00000111747.3	Olfr1134	chr2	protein_coding	olfactory receptor 1134
chr2	87574117	87576525	+	87574117	87577198	A3SS	0.5	50	50	ENSMUST00000217102.2	ENSMUSG00000068817.6	Olfr1140	chr2	protein_coding	olfactory receptor 1140
chr2	87611018	87612869	+	87609862	87612869	A5SS	0.5	50	50	ENSMUST00000105210.3	ENSMUSG00000068816.4	Olfr152	chr2	protein_coding	olfactory receptor 152
chr2	87630950;87631806	87631749;87632664	+	87630950	87632664	cassetteExon	0.5	100	100	ENSMUST00000111568.5	ENSMUSG00000068815.4	Olfr1143	chr2	protein_coding	olfactory receptor 1143
chr2	87734039;87734634	87734349;87735320	-	87734039	87735320	cassetteExon	0.5	100	100	ENSMUST00000215862.2	ENSMUSG00000075146.3	Olfr1154	chr2	protein_coding	olfactory receptor 1154
chr2	87774000	87775372	-	87774000	87774551	5pMXE	0.5	50	50	ENSMUST00000214641.2	ENSMUSG00000075145.3	Olfr1155	chr2	protein_coding	olfactory receptor 1155
chr2	87780616	87783365	-	87780616	87783288	5pMXE	0.5	50	50	ENSMUST00000216726.2	ENSMUSG00000075144.6	Olfr1156	chr2	protein_coding	olfactory receptor 1156
chr2	87854490	87855037	+	87853232	87855037	A5SS	0.5	50	50	ENSMUST00000214438.2	ENSMUSG00000045150.6	Olfr1161	chr2	protein_coding	olfactory receptor 1161
chr2	88142109	88145224	-	88142109	88144982	5pMXE	0.5	50	50	ENSMUST00000214955.2	ENSMUSG00000080713.4	Olfr1174	chr2	protein_coding	olfactory receptor 1174
chr2	88217621	88231063	+	88217621	88221571	3pMXE	0.33	50	50	ENSMUST00000214040.3	ENSMUSG00000056995.4	Olfr1178	chr2	protein_coding	olfactory receptor 1178
chr2	88217621	88221936	+	88217621	88221571	A3SS	0.33	50	50	ENSMUST00000214040.3	ENSMUSG00000056995.4	Olfr1178	chr2	protein_coding	olfactory receptor 1178
chr2	88217621	88231063	+	88217621	88221936	3pMXE	0.33	50	50	ENSMUST00000217346.3	ENSMUSG00000056995.4	Olfr1178	chr2	protein_coding	olfactory receptor 1178
chr2	88243032	88249457	-	88243032;88247569	88247528;88249457	ES	0.5	50	50	ENSMUST00000217320.3	ENSMUSG00000081836.4	Olfr1180	chr2	protein_coding	olfactory receptor 1180
chr2	88256074	88256215	-	88256074	88256436	A5SS	0.5	50	50	ENSMUST00000213190.2	ENSMUSG00000075125.3	Olfr1181	chr2	protein_coding	olfactory receptor 1181
chr2	88279009;88279217	88279151;88279369	-	88279009	88279369	cassetteExon	0.5	100	100	ENSMUST00000179450.9	ENSMUSG00000090097.9	Olfr1182	chr2	protein_coding	olfactory receptor 1182
chr2	88289137	88291734	+	88289137	88291639	A3SS	0.5	50	50	ENSMUST00000219871.2	ENSMUSG00000049372.12	Olfr1183	chr2	protein_coding	olfactory receptor 1183
chr2	88349386;88351524	88351416;88355882	+	88349386	88355882	cassetteExon	0.5	100	100	ENSMUST00000216978.2	ENSMUSG00000082882.3	Olfr1186	chr2	protein_coding	olfactory receptor 1186
chr2	88479214	88482468	+	88479214;88480454	88480218;88482468	ES	0.5	50	50	ENSMUST00000217373.2	ENSMUSG00000111590.3	Olfr1192-ps1	chr2	protein_coding	olfactory receptor 1192, pseudogene 1
chr2	88506093	88507073	+	88506093	88507234	A3SS	0.5	50	50	ENSMUST00000217271.2	ENSMUSG00000060827.3	Olfr1193	chr2	protein_coding	olfactory receptor 1193
chr2	88507329	88508177	+	88507329	88508817	A3SS	0.5	50	50	ENSMUST00000217271.2	ENSMUSG00000060827.3	Olfr1193	chr2	protein_coding	olfactory receptor 1193
chr2	88577405	88581394	-	88577405	88581638	A5SS	0.5	50	50	ENSMUST00000215179.3	ENSMUSG00000075117.4	Olfr1198	chr2	protein_coding	olfactory receptor 1198
chr2	88587056	88590365	-	88587056	88590310	5pMXE	0.33	50	50	ENSMUST00000131038.4	ENSMUSG00000089892.4	Olfr1199	chr2	protein_coding	olfactory receptor 1199
chr2	88587056;88588840	88588741;88590310	-	88587056	88590310	cassetteExon	0.5	100	100	ENSMUST00000131038.4	ENSMUSG00000089892.4	Olfr1199	chr2	protein_coding	olfactory receptor 1199
chr2	88587056	88588741	-	88587056	88590365	A5SS	0.33	50	50	ENSMUST00000124021.3	ENSMUSG00000089892.4	Olfr1199	chr2	protein_coding	olfactory receptor 1199
chr2	88728541	88732456	-	88728541	88732386	A5SS	0.5	50	50	ENSMUST00000214297.2	ENSMUSG00000075114.5	Olfr1208	chr2	protein_coding	olfactory receptor 1208
chr2	88740780	88745386	-	88740195	88745386	A3SS	0.5	50	50	ENSMUST00000213240.2	ENSMUSG00000075113.3	Olfr1209	chr2	protein_coding	olfactory receptor 1209
chr2	88762276	88767978	-	88762276;88763679	88763627;88767978	ES	0.5	50	50	ENSMUST00000215205.2	ENSMUSG00000075112.3	Olfr1211	chr2	protein_coding	olfactory receptor 1211
chr2	88762293	88763627	-	88762276	88763627	A3SS	0.5	50	50	ENSMUST00000215205.2	ENSMUSG00000075112.3	Olfr1211	chr2	protein_coding	olfactory receptor 1211
chr2	88762276	88767978	-	88763679	88767978	A3SS&ES	0.5	50	50	ENSMUST00000141958.3	ENSMUSG00000075112.3	Olfr1211	chr2	protein_coding	olfactory receptor 1211
chr2	88805989	88810402	-	88805587	88810402	A3SS	0.5	50	50	ENSMUST00000168169.10	ENSMUSG00000075111.12	Olfr1213	chr2	protein_coding	olfactory receptor 1213
chr2	88820177	88822940	-	88820177	88822769	A5SS	0.5	50	50	ENSMUST00000216026.2	ENSMUSG00000075110.3	Olfr1214	chr2	protein_coding	olfactory receptor 1214
chr2	88832775;88834456	88834382;88837121	-	88832775	88837121	cassetteExon	0.5	100	100	ENSMUST00000216271.3	ENSMUSG00000100016.4	Olfr1215	chr2	protein_coding	olfactory receptor 1215
chr2	88845432	88848469	-	88838384	88848469	A3SS	0.33	50	50	ENSMUST00000218738.2	ENSMUSG00000075107.4	Olfr1216	chr2	protein_coding	olfactory receptor 1216
chr2	88846030	88848469	-	88838384	88848469	A3SS	0.33	50	50	ENSMUST00000218738.2	ENSMUSG00000075107.4	Olfr1216	chr2	protein_coding	olfactory receptor 1216
chr2	88845432;88846030	88845975;88848469	-	88845432	88848469	cassetteExon	0.5	100	100	ENSMUST00000216000.2	ENSMUSG00000075107.4	Olfr1216	chr2	protein_coding	olfactory receptor 1216
chr2	88855437	88862221	-	88855437	88860217	5pMXE	0.33	50	50	ENSMUST00000213669.2	ENSMUSG00000101391.4	Olfr1217	chr2	protein_coding	olfactory receptor 1217
chr2	88855437;88857867	88857638;88860217	-	88855437	88860217	cassetteExon	0.5	100	100	ENSMUST00000213669.2	ENSMUSG00000101391.4	Olfr1217	chr2	protein_coding	olfactory receptor 1217
chr2	88855437	88857638	-	88855437	88862221	A5SS	0.33	50	50	ENSMUST00000214022.3	ENSMUSG00000101391.4	Olfr1217	chr2	protein_coding	olfactory receptor 1217
chr2	88886504	88888967	-	88886504	88887642	5pMXE	0.33	50	50	ENSMUST00000213609.3	ENSMUSG00000075105.4	Olfr1218	chr2	protein_coding	olfactory receptor 1218
chr2	88886504	88891350	-	88886504	88887642	5pMXE	0.33	50	50	ENSMUST00000213609.3	ENSMUSG00000075105.4	Olfr1218	chr2	protein_coding	olfactory receptor 1218
chr2	88886504	88891350	-	88886504;88889009	88888967;88891350	ES	0.5	50	50	ENSMUST00000215048.2	ENSMUSG00000075105.4	Olfr1218	chr2	protein_coding	olfactory receptor 1218
chr2	88909462	88913640	-	88909462	88909970	5pMXE	0.33	50	50	ENSMUST00000213724.2	ENSMUSG00000075104.4	Olfr1219	chr2	protein_coding	olfactory receptor 1219
chr2	88909462	88913650	-	88909462	88909970	5pMXE	0.33	50	50	ENSMUST00000213724.2	ENSMUSG00000075104.4	Olfr1219	chr2	protein_coding	olfactory receptor 1219
chr2	88909462	88913650	-	88909462	88913640	A5SS	0.33	50	50	ENSMUST00000217421.2	ENSMUSG00000075104.4	Olfr1219	chr2	protein_coding	olfactory receptor 1219
chr2	88928314	88936991	-	88928314;88933614	88933364;88936991	ES	0.5	50	50	ENSMUST00000213288.2	ENSMUSG00000101480.4	Olfr1220	chr2	protein_coding	olfactory receptor 1220
chr2	88944779;88946321	88946256;88947417	-	88944779	88947417	cassetteExon	0.5	100	100	ENSMUST00000217635.2	ENSMUSG00000075102.3	Olfr1221	chr2	protein_coding	olfactory receptor 1221
chr2	88944779	88946256	-	88944801	88946256	A3SS	0.5	50	50	ENSMUST00000143255.3	ENSMUSG00000075102.3	Olfr1221	chr2	protein_coding	olfactory receptor 1221
chr2	88944779	88947417	-	88946321	88947417	A3SS&ES	0.5	50	50	ENSMUST00000143255.3	ENSMUSG00000075102.3	Olfr1221	chr2	protein_coding	olfactory receptor 1221
chr2	88957817	88957918	-	88957801	88957918	A3SS	0.5	50	50	ENSMUST00000215816.3	ENSMUSG00000075101.5	Olfr1222	chr2	protein_coding	olfactory receptor 1222
chr2	88987535	88990550	-	88987771	88990550	A3SS	0.33	50	50	ENSMUST00000216833.2	ENSMUSG00000075099.3	Olfr1224-ps1	chr2	protein_coding	olfactory receptor 1224, pseudogene 1
chr2	88987842	88990550	-	88987771	88990550	A3SS	0.33	50	50	ENSMUST00000216833.2	ENSMUSG00000075099.3	Olfr1224-ps1	chr2	protein_coding	olfactory receptor 1224, pseudogene 1
chr2	88987535	88990550	-	88987842	88990550	A3SS	0.33	50	50	ENSMUST00000214069.2	ENSMUSG00000075099.3	Olfr1224-ps1	chr2	protein_coding	olfactory receptor 1224, pseudogene 1
chr2	88987535	88994178	-	88987535	88990550	5pMXE	0.5	50	50	ENSMUST00000216913.2	ENSMUSG00000075099.3	Olfr1224-ps1	chr2	protein_coding	olfactory receptor 1224, pseudogene 1
chr2	89024418	89027112	-	89025026	89027112	A3SS	0.33	50	50	ENSMUST00000215987.2	ENSMUSG00000075097.4	Olfr1226	chr2	protein_coding	olfactory receptor 1226
chr2	89026393	89027112	-	89025026	89027112	A3SS	0.33	50	50	ENSMUST00000215987.2	ENSMUSG00000075097.4	Olfr1226	chr2	protein_coding	olfactory receptor 1226
chr2	89024418	89027112	-	89024418;89026393	89026318;89027112	ES	0.33	50	50	ENSMUST00000215562.2	ENSMUSG00000075097.4	Olfr1226	chr2	protein_coding	olfactory receptor 1226
chr2	89024418	89027112	-	89024418	89026318	A5SS	0.5	50	50	ENSMUST00000220416.2	ENSMUSG00000075097.4	Olfr1226	chr2	protein_coding	olfactory receptor 1226
chr2	89115017	89117203	-	89115017	89117333	A5SS	0.5	50	50	ENSMUST00000214593.3	ENSMUSG00000075095.6	Olfr1229	chr2	protein_coding	olfactory receptor 1229
chr2	89159368	89159514	-	89159417	89159514	A3SS	0.5	50	50	ENSMUST00000213860.2	ENSMUSG00000075092.3	Olfr1232	chr2	protein_coding	olfactory receptor 1232
chr2	89170697	89172228	-	89170697	89172710	A5SS	0.5	50	50	ENSMUST00000215018.3	ENSMUSG00000075091.6	Olfr1233	chr2	protein_coding	olfactory receptor 1233
chr2	89194012	89195006	-	89194012	89195039	A5SS	0.5	50	50	ENSMUST00000137692.3	ENSMUSG00000075090.5	Olfr1234	chr2	protein_coding	olfactory receptor 1234
chr2	89237461	89239387	-	89237461	89239830	A5SS	0.5	50	50	ENSMUST00000217226.2	ENSMUSG00000111517.2	Olfr1238	chr2	protein_coding	olfactory receptor 1238
chr2	89248849;89249962	89249876;89250672	-	89248849	89250672	cassetteExon	0.5	100	100	ENSMUST00000217181.2	ENSMUSG00000075088.3	Olfr1239	chr2	protein_coding	olfactory receptor 1239
chr2	89313560	89315831	-	89313674	89315831	A3SS	0.5	50	50	ENSMUST00000215055.2	ENSMUSG00000075086.3	Olfr1241	chr2	protein_coding	olfactory receptor 1241
chr2	89324854;89328113	89328019;89328500	-	89324854	89328500	cassetteExon	0.5	100	100	ENSMUST00000111540.4	ENSMUSG00000075085.7	Olfr1242	chr2	protein_coding	olfactory receptor 1242
chr2	89324854	89328500	-	89324854	89328019	A5SS&ES	0.5	50	50	ENSMUST00000216001.2	ENSMUSG00000075085.7	Olfr1242	chr2	protein_coding	olfactory receptor 1242
chr2	89328113	89328500	-	89328113	89328215	A5SS	0.5	50	50	ENSMUST00000216001.2	ENSMUSG00000075085.7	Olfr1242	chr2	protein_coding	olfactory receptor 1242
chr2	89357375	89361407	-	89358955	89361407	A3SS	0.5	50	50	ENSMUST00000144885.3	ENSMUSG00000075084.4	Olfr1243	chr2	protein_coding	olfactory receptor 1243
chr2	89423148	89423449	-	89423148	89423345	A5SS	0.33	50	50	ENSMUST00000217254.2	ENSMUSG00000111715.2	Olfr1246	chr2	protein_coding	olfactory receptor 1246
chr2	89423148	89423469	-	89423148	89423345	A5SS	0.33	50	50	ENSMUST00000217254.2	ENSMUSG00000111715.2	Olfr1246	chr2	protein_coding	olfactory receptor 1246
chr2	89423148	89423449	-	89423148	89423469	A5SS	0.33	50	50	ENSMUST00000217192.2	ENSMUSG00000111715.2	Olfr1246	chr2	protein_coding	olfactory receptor 1246
chr2	89440497	89441905	-	89440629	89441905	A3SS	0.5	50	50	ENSMUST00000111532.4	ENSMUSG00000075081.7	Olfr1247	chr2	protein_coding	olfactory receptor 1247
chr2	89487975	89489664	-	89487980	89489664	A3SS	0.5	50	50	ENSMUST00000111527.4	ENSMUSG00000075078.6	Olfr1250	chr2	protein_coding	olfactory receptor 1250
chr2	89500290	89502178	-	89500290	89502236	A5SS	0.5	50	50	ENSMUST00000214639.2	ENSMUSG00000111567.2	Olfr1251	chr2	protein_coding	olfactory receptor 1251
chr2	89552640	89554748	-	89552640	89554836	A5SS	0.5	50	50	ENSMUST00000216203.2	ENSMUSG00000110819.2	Olfr1252	chr2	protein_coding	olfactory receptor 1252
chr2	89583402	89584973	-	89583230	89584973	A3SS	0.5	50	50	ENSMUST00000213484.2	ENSMUSG00000075075.3	Olfr1253	chr2	protein_coding	olfactory receptor 1253
chr2	89619776	89623422	-	89619776	89623889	A5SS	0.5	50	50	ENSMUST00000216587.2	ENSMUSG00000075074.4	Olfr1254	chr2	protein_coding	olfactory receptor 1254
chr2	89675122	89677857	-	89675353	89677857	A3SS	0.5	50	50	ENSMUST00000214428.3	ENSMUSG00000075072.4	Olfr48	chr2	protein_coding	olfactory receptor 48
chr2	89758011	89759312	+	89758011	89759231	A3SS	0.5	50	50	ENSMUST00000213720.3	ENSMUSG00000049149.10	Olfr1258	chr2	protein_coding	olfactory receptor 1258
chr2	89805229;89806435	89806332;89808326	+	89805229	89808326	cassetteExon	0.5	100	100	ENSMUST00000216744.2	ENSMUSG00000042894.12	Olfr1260	chr2	protein_coding	olfactory receptor 1260
chr2	89805229	89808091	+	89805229	89808326	A3SS	0.33	50	50	ENSMUST00000216744.2	ENSMUSG00000042894.12	Olfr1260	chr2	protein_coding	olfactory receptor 1260
chr2	89805141	89808326	+	89805229	89808326	A5SS	0.33	50	50	ENSMUST00000216744.2	ENSMUSG00000042894.12	Olfr1260	chr2	protein_coding	olfactory receptor 1260
chr2	89806435	89808326	+	89805141	89808326	A5SS	0.33	50	50	ENSMUST00000213162.2	ENSMUSG00000042894.12	Olfr1260	chr2	protein_coding	olfactory receptor 1260
chr2	89805229;89806435	89806332;89808091	+	89805229	89808091	cassetteExon	0.5	100	100	ENSMUST00000214630.2	ENSMUSG00000042894.12	Olfr1260	chr2	protein_coding	olfactory receptor 1260
chr2	89805229	89808091	+	89805229	89806332	A3SS&ES	0.33	50	50	ENSMUST00000141685.3	ENSMUSG00000042894.12	Olfr1260	chr2	protein_coding	olfactory receptor 1260
chr2	89806435	89808091	+	89806435	89808326	A3SS	0.5	50	50	ENSMUST00000141685.3	ENSMUSG00000042894.12	Olfr1260	chr2	protein_coding	olfactory receptor 1260
chr2	89805229	89808326	+	89805229	89806332	A3SS&ES	0.33	50	50	ENSMUST00000111512.10	ENSMUSG00000042894.12	Olfr1260	chr2	protein_coding	olfactory receptor 1260
chr2	89821657	89823698	+	89821642	89823698	A5SS	0.33	50	50	ENSMUST00000111509.3	ENSMUSG00000061295.6	Olfr1261	chr2	protein_coding	olfactory receptor 1261
chr2	89822157	89823698	+	89821642	89823698	A5SS	0.33	50	50	ENSMUST00000111509.3	ENSMUSG00000061295.6	Olfr1261	chr2	protein_coding	olfactory receptor 1261
chr2	89822157	89823698	+	89821657	89823698	A5SS	0.33	50	50	ENSMUST00000213909.3	ENSMUSG00000061295.6	Olfr1261	chr2	protein_coding	olfactory receptor 1261
chr2	89830726	89831073	+	89830531	89831073	A5SS	0.5	50	50	ENSMUST00000111508.9	ENSMUSG00000051313.13	Olfr1262	chr2	protein_coding	olfactory receptor 1262
chr2	89843339	89845493	+	89843339	89845234	A3SS	0.5	50	50	ENSMUST00000214382.2	ENSMUSG00000059112.7	Olfr1263	chr2	protein_coding	olfactory receptor 1263
chr2	89882743;89886406	89886282;89893510	-	89882743	89893510	cassetteExon	0.5	100	100	ENSMUST00000111506.3	ENSMUSG00000075068.4	Olfr140	chr2	protein_coding	olfactory receptor 140
chr2	89949965	89951657	-	89949965	89951220	5pMXE	0.5	50	50	ENSMUST00000216493.2	ENSMUSG00000084336.3	Olfr1269	chr2	protein_coding	olfactory receptor 1269
chr2	89969522	89972611	-	89969522;89972037	89971973;89972611	ES	0.5	50	50	ENSMUST00000215659.2	ENSMUSG00000075066.8	Olfr32	chr2	protein_coding	olfactory receptor 32
chr2	89969522;89971767	89971363;89971973	-	89969522	89971973	cassetteExon	0.5	100	100	ENSMUST00000215659.2	ENSMUSG00000075066.8	Olfr32	chr2	protein_coding	olfactory receptor 32
chr2	89969522;89971767	89971652;89971973	-	89969522	89971973	cassetteExon	0.5	100	100	ENSMUST00000215659.2	ENSMUSG00000075066.8	Olfr32	chr2	protein_coding	olfactory receptor 32
chr2	89969522;89971396	89971363;89971652	-	89969522	89971652	cassetteExon	0.5	100	100	ENSMUST00000215153.3	ENSMUSG00000075066.8	Olfr32	chr2	protein_coding	olfactory receptor 32
chr2	89969522;89972037	89971652;89972611	-	89969522	89972611	cassetteExon	0.5	100	100	ENSMUST00000213293.2	ENSMUSG00000075066.8	Olfr32	chr2	protein_coding	olfactory receptor 32
chr2	89969522	89971363	-	89969522	89972611	A5SS	0.25	50	50	ENSMUST00000213293.2	ENSMUSG00000075066.8	Olfr32	chr2	protein_coding	olfactory receptor 32
chr2	89980389	89982698	-	89980389;89980817	89980660;89982698	ES	0.33	50	50	ENSMUST00000215578.2	ENSMUSG00000075065.6	Olfr1270	chr2	protein_coding	olfactory receptor 1270
chr2	89982735	89983411	-	89982735	89983234	5pMXE	0.5	50	50	ENSMUST00000215578.2	ENSMUSG00000075065.6	Olfr1270	chr2	protein_coding	olfactory receptor 1270
chr2	89980745	89982698	-	89980817	89982698	A3SS	0.33	50	50	ENSMUST00000215578.2	ENSMUSG00000075065.6	Olfr1270	chr2	protein_coding	olfactory receptor 1270
chr2	89980389;89980745	89980660;89982698	-	89980389	89982698	cassetteExon	0.5	100	100	ENSMUST00000216354.2	ENSMUSG00000075065.6	Olfr1270	chr2	protein_coding	olfactory receptor 1270
chr2	89980389;89982735	89982698;89983411	-	89980389	89983411	cassetteExon	0.5	100	100	ENSMUST00000217139.2	ENSMUSG00000075065.6	Olfr1270	chr2	protein_coding	olfactory receptor 1270
chr2	89980389	89980660	-	89980389	89983411	A5SS	0.33	50	50	ENSMUST00000217139.2	ENSMUSG00000075065.6	Olfr1270	chr2	protein_coding	olfactory receptor 1270
chr2	90096721	90100688	-	90096813	90100688	A3SS	0.5	50	50	ENSMUST00000216383.2	ENSMUSG00000075062.5	Olfr1271	chr2	protein_coding	olfactory receptor 1271
chr2	90305333	90410500	-	90305333	90309311	5pMXE	0.5	50	50	ENSMUST00000111495.9	ENSMUSG00000025314.17	Ptprj	chr2	protein_coding	protein tyrosine phosphatase, receptor type, J
chr2	90309983	90318155	+	90309983	90310912	3pMXE	0.5	50	50	ENSMUST00000126219.2	ENSMUSG00000085471.2	4933423P22Rik	chr2	lncRNA	RIKEN cDNA 4933423P22 gene
chr2	90577132	90581776	+	90577132;90581548	90581412;90581776	ES	0.5	50	50	ENSMUST00000238890.2	ENSMUSG00000008200.16	Fnbp4	chr2	protein_coding	formin binding protein 4
chr2	90597885;90598299	90598197;90598860	+	90597885	90598860	cassetteExon	0.5	100	100	ENSMUST00000238890.2	ENSMUSG00000008200.16	Fnbp4	chr2	protein_coding	formin binding protein 4
chr2	90599044;90605192	90605094;90606249	+	90599044	90606249	cassetteExon	0.5	100	100	ENSMUST00000238890.2	ENSMUSG00000008200.16	Fnbp4	chr2	protein_coding	formin binding protein 4
chr2	90593889	90596180	+	90593889	90596174	A3SS	0.5	50	50	ENSMUST00000238890.2	ENSMUSG00000008200.16	Fnbp4	chr2	protein_coding	formin binding protein 4
chr2	90597885	90598860	+	90597885	90598197	3pMXE	0.5	50	50	ENSMUST00000142631.2	ENSMUSG00000008200.16	Fnbp4	chr2	protein_coding	formin binding protein 4
chr2	90619411	90621804	+	90619411;90620176	90620123;90621804	ES	0.5	50	50	ENSMUST00000170320.8	ENSMUSG00000040812.15	Agbl2	chr2	protein_coding	ATP/GTP binding protein-like 2
chr2	90613104	90613920	+	90613104	90613905	A3SS	0.33	50	50	ENSMUST00000170320.8	ENSMUSG00000040812.15	Agbl2	chr2	protein_coding	ATP/GTP binding protein-like 2
chr2	90613104	90613924	+	90613104	90613905	A3SS	0.33	50	50	ENSMUST00000170320.8	ENSMUSG00000040812.15	Agbl2	chr2	protein_coding	ATP/GTP binding protein-like 2
chr2	90614017	90614406	+	90614017	90614330	A3SS	0.5	50	50	ENSMUST00000170320.8	ENSMUSG00000040812.15	Agbl2	chr2	protein_coding	ATP/GTP binding protein-like 2
chr2	90643696	90644467	+	90643696	90645684	A3SS	0.33	50	50	ENSMUST00000170320.8	ENSMUSG00000040812.15	Agbl2	chr2	protein_coding	ATP/GTP binding protein-like 2
chr2	90643696	90646608	+	90643696	90645684	A3SS	0.33	50	50	ENSMUST00000170320.8	ENSMUSG00000040812.15	Agbl2	chr2	protein_coding	ATP/GTP binding protein-like 2
chr2	90621956	90624217	+	90621989	90624217	A5SS	0.5	50	50	ENSMUST00000170320.8	ENSMUSG00000040812.15	Agbl2	chr2	protein_coding	ATP/GTP binding protein-like 2
chr2	90643696	90644467	+	90643696	90646608	A3SS	0.33	50	50	ENSMUST00000051831.13	ENSMUSG00000040812.15	Agbl2	chr2	protein_coding	ATP/GTP binding protein-like 2
chr2	90613104	90613920	+	90613104	90613924	A3SS	0.33	50	50	ENSMUST00000136058.8	ENSMUSG00000040812.15	Agbl2	chr2	protein_coding	ATP/GTP binding protein-like 2
chr2	90613720	90613920	+	90613104	90613920	A5SS	0.5	50	50	ENSMUST00000037219.12	ENSMUSG00000040812.15	Agbl2	chr2	protein_coding	ATP/GTP binding protein-like 2
chr2	90677729	90679942	+	90677729;90679799	90679715;90679942	ES	0.5	50	50	ENSMUST00000136872.8	ENSMUSG00000027282.18	Mtch2	chr2	protein_coding	mitochondrial carrier 2
chr2	90680048	90683395	+	90680048;90683210	90683184;90683395	ES	0.5	50	50	ENSMUST00000136872.8	ENSMUSG00000027282.18	Mtch2	chr2	protein_coding	mitochondrial carrier 2
chr2	90677729	90677857	+	90677729	90679715	A3SS	0.33	50	50	ENSMUST00000136872.8	ENSMUSG00000027282.18	Mtch2	chr2	protein_coding	mitochondrial carrier 2
chr2	90680048	90683160	+	90680048	90683184	A3SS	0.33	50	50	ENSMUST00000136872.8	ENSMUSG00000027282.18	Mtch2	chr2	protein_coding	mitochondrial carrier 2
chr2	90683210	90683368	+	90683210	90683395	A3SS	0.5	50	50	ENSMUST00000136872.8	ENSMUSG00000027282.18	Mtch2	chr2	protein_coding	mitochondrial carrier 2
chr2	90677707	90679715	+	90677729	90679715	A5SS	0.5	50	50	ENSMUST00000136872.8	ENSMUSG00000027282.18	Mtch2	chr2	protein_coding	mitochondrial carrier 2
chr2	90677729	90677857	+	90677729	90679942	A3SS	0.33	50	50	ENSMUST00000111468.10	ENSMUSG00000027282.18	Mtch2	chr2	protein_coding	mitochondrial carrier 2
chr2	90680048	90683395	+	90680048	90683184	A3SS&ES	0.33	50	50	ENSMUST00000150232.8	ENSMUSG00000027282.18	Mtch2	chr2	protein_coding	mitochondrial carrier 2
chr2	90680048;90683210	90683160;90683395	+	90680048	90683395	cassetteExon	0.5	100	100	ENSMUST00000111467.4	ENSMUSG00000027282.18	Mtch2	chr2	protein_coding	mitochondrial carrier 2
chr2	90677729	90679942	+	90679799	90679942	A5SS&ES	0.5	50	50	ENSMUST00000057216.15	ENSMUSG00000027282.18	Mtch2	chr2	protein_coding	mitochondrial carrier 2
chr2	90725221	90728728	-	90725221;90728437	90728344;90728728	ES	0.5	50	50	ENSMUST00000140248.2	ENSMUSG00000005510.10	Ndufs3	chr2	protein_coding	NADH:ubiquinone oxidoreductase core subunit S3
chr2	90725221	90728981	-	90725221;90728847	90728728;90728981	ES	0.5	50	50	ENSMUST00000005647.4	ENSMUSG00000005510.10	Ndufs3	chr2	protein_coding	NADH:ubiquinone oxidoreductase core subunit S3
chr2	90725221	90728344	-	90725221	90728981	A5SS	0.33	50	50	ENSMUST00000123426.8	ENSMUSG00000005510.10	Ndufs3	chr2	protein_coding	NADH:ubiquinone oxidoreductase core subunit S3
chr2	90725221	90728981	-	90728847	90728981	3pMXE	0.5	50	50	ENSMUST00000152059.2	ENSMUSG00000005510.10	Ndufs3	chr2	protein_coding	NADH:ubiquinone oxidoreductase core subunit S3
chr2	90735253	90736010	+	90735156	90736010	A5SS	0.33	50	50	ENSMUST00000111464.8	ENSMUSG00000005505.13	Kbtbd4	chr2	protein_coding	kelch repeat and BTB (POZ) domain containing 4
chr2	90735499	90736010	+	90735156	90736010	A5SS	0.33	50	50	ENSMUST00000111464.8	ENSMUSG00000005505.13	Kbtbd4	chr2	protein_coding	kelch repeat and BTB (POZ) domain containing 4
chr2	90735253	90735763	+	90735253	90736010	A3SS	0.5	50	50	ENSMUST00000090682.4	ENSMUSG00000005505.13	Kbtbd4	chr2	protein_coding	kelch repeat and BTB (POZ) domain containing 4
chr2	90735499	90736010	+	90735253	90736010	A5SS	0.33	50	50	ENSMUST00000090682.4	ENSMUSG00000005505.13	Kbtbd4	chr2	protein_coding	kelch repeat and BTB (POZ) domain containing 4
chr2	90744519	90747773	-	90744519;90747255	90747198;90747773	ES	0.5	50	50	ENSMUST00000125001.11	ENSMUSG00000063235.19	Ptpmt1	chr2	protein_coding	protein tyrosine phosphatase, mitochondrial 1
chr2	90770986	90828925	+	90770986	90818010	3pMXE	0.33	50	50	ENSMUST00000150546.2	ENSMUSG00000005506.17	Celf1	chr2	protein_coding	CUGBP, Elav-like family member 1
chr2	90770986;90784686	90784634;90818010	+	90770986	90818010	cassetteExon	0.5	100	100	ENSMUST00000150546.2	ENSMUSG00000005506.17	Celf1	chr2	protein_coding	CUGBP, Elav-like family member 1
chr2	90795555	90818010	+	90770986	90818010	A5SS	0.33	50	50	ENSMUST00000150546.2	ENSMUSG00000005506.17	Celf1	chr2	protein_coding	CUGBP, Elav-like family member 1
chr2	90770986	90828925	+	90770986;90818161	90818010;90828925	ES	0.33	50	50	ENSMUST00000005643.14	ENSMUSG00000005506.17	Celf1	chr2	protein_coding	CUGBP, Elav-like family member 1
chr2	90770986;90784686	90784634;90828925	+	90770986;90818161	90818010;90828925	MXE	0.5	100	100	ENSMUST00000005643.14	ENSMUSG00000005506.17	Celf1	chr2	protein_coding	CUGBP, Elav-like family member 1
chr2	90835207	90836977	+	90835207	90836965	A3SS	0.5	50	50	ENSMUST00000005643.14	ENSMUSG00000005506.17	Celf1	chr2	protein_coding	CUGBP, Elav-like family member 1
chr2	90838645	90839547	+	90838645	90839550	A3SS	0.5	50	50	ENSMUST00000005643.14	ENSMUSG00000005506.17	Celf1	chr2	protein_coding	CUGBP, Elav-like family member 1
chr2	90843747	90843836	+	90843747	90846911	A3SS	0.5	50	50	ENSMUST00000005643.14	ENSMUSG00000005506.17	Celf1	chr2	protein_coding	CUGBP, Elav-like family member 1
chr2	90770986;90784686	90784634;90828925	+	90770986	90828925	cassetteExon	0.5	100	100	ENSMUST00000111451.10	ENSMUSG00000005506.17	Celf1	chr2	protein_coding	CUGBP, Elav-like family member 1
chr2	90784686;90818161	90818010;90828925	+	90784686	90828925	cassetteExon	0.5	100	100	ENSMUST00000177642.8	ENSMUSG00000005506.17	Celf1	chr2	protein_coding	CUGBP, Elav-like family member 1
chr2	90795555	90818010	+	90784686	90818010	A5SS	0.33	50	50	ENSMUST00000127580.8	ENSMUSG00000005506.17	Celf1	chr2	protein_coding	CUGBP, Elav-like family member 1
chr2	90770986	90828925	+	90818161	90828925	5pMXE	0.33	50	50	ENSMUST00000111452.8	ENSMUSG00000005506.17	Celf1	chr2	protein_coding	CUGBP, Elav-like family member 1
chr2	90784686	90828925	+	90818161	90828925	5pMXE	0.33	50	50	ENSMUST00000111452.8	ENSMUSG00000005506.17	Celf1	chr2	protein_coding	CUGBP, Elav-like family member 1
chr2	90867230	90873305	+	90867230;90872357	90872199;90873305	ES	0.5	50	50	ENSMUST00000111445.10	ENSMUSG00000002104.12	Rapsn	chr2	protein_coding	receptor-associated protein of the synapse
chr2	90873403	90873485	+	90873403	90875185	A3SS	0.5	50	50	ENSMUST00000111445.10	ENSMUSG00000002104.12	Rapsn	chr2	protein_coding	receptor-associated protein of the synapse
chr2	90874089	90875185	+	90873403	90875185	A5SS	0.5	50	50	ENSMUST00000111445.10	ENSMUSG00000002104.12	Rapsn	chr2	protein_coding	receptor-associated protein of the synapse
chr2	90874814;90875711	90875594;90876071	-	90874814	90876071	cassetteExon	0.5	100	100	ENSMUST00000146633.8	ENSMUSG00000086495.8	Gm13778	chr2	lncRNA	predicted gene 13778
chr2	90885003	90885803	+	90885003;90885449	90885324;90885803	ES	0.5	50	50	ENSMUST00000067663.14	ENSMUSG00000002102.16	Psmc3	chr2	protein_coding	proteasome (prosome, macropain) 26S subunit, ATPase 3
chr2	90889472	90894242	+	90889472	90889599	3pMXE	0.5	50	50	ENSMUST00000067663.14	ENSMUSG00000002102.16	Psmc3	chr2	protein_coding	proteasome (prosome, macropain) 26S subunit, ATPase 3
chr2	90886387	90886987	+	90886387	90887003	A3SS	0.5	50	50	ENSMUST00000067663.14	ENSMUSG00000002102.16	Psmc3	chr2	protein_coding	proteasome (prosome, macropain) 26S subunit, ATPase 3
chr2	90884769	90884920	+	90884676	90884920	A5SS	0.5	50	50	ENSMUST00000067663.14	ENSMUSG00000002102.16	Psmc3	chr2	protein_coding	proteasome (prosome, macropain) 26S subunit, ATPase 3
chr2	90895149;90895352	90895251;90895927	-	90895149	90895927	cassetteExon	0.5	100	100	ENSMUST00000079976.10	ENSMUSG00000002105.16	Slc39a13	chr2	protein_coding	solute carrier family 39 (metal ion transporter), member 13
chr2	90896471;90899084	90898776;90900500	-	90896471	90900500	cassetteExon	0.5	100	100	ENSMUST00000079976.10	ENSMUSG00000002105.16	Slc39a13	chr2	protein_coding	solute carrier family 39 (metal ion transporter), member 13
chr2	90896045	90896358	-	90896059	90896358	A3SS	0.33	50	50	ENSMUST00000079976.10	ENSMUSG00000002105.16	Slc39a13	chr2	protein_coding	solute carrier family 39 (metal ion transporter), member 13
chr2	90896084	90896358	-	90896059	90896358	A3SS	0.33	50	50	ENSMUST00000079976.10	ENSMUSG00000002105.16	Slc39a13	chr2	protein_coding	solute carrier family 39 (metal ion transporter), member 13
chr2	90899998	90900500	-	90896471	90900500	A3SS	0.33	50	50	ENSMUST00000079976.10	ENSMUSG00000002105.16	Slc39a13	chr2	protein_coding	solute carrier family 39 (metal ion transporter), member 13
chr2	90899084;90899998	90899974;90900500	-	90899084	90900500	cassetteExon	0.5	100	100	ENSMUST00000073575.12	ENSMUSG00000002105.16	Slc39a13	chr2	protein_coding	solute carrier family 39 (metal ion transporter), member 13
chr2	90896084	90896358	-	90896045	90896358	A3SS	0.33	50	50	ENSMUST00000073575.12	ENSMUSG00000002105.16	Slc39a13	chr2	protein_coding	solute carrier family 39 (metal ion transporter), member 13
chr2	90899084	90899166	-	90899084	90900500	A5SS	0.33	50	50	ENSMUST00000073575.12	ENSMUSG00000002105.16	Slc39a13	chr2	protein_coding	solute carrier family 39 (metal ion transporter), member 13
chr2	90899084	90899166	-	90899084	90899974	A5SS	0.33	50	50	ENSMUST00000153367.2	ENSMUSG00000002105.16	Slc39a13	chr2	protein_coding	solute carrier family 39 (metal ion transporter), member 13
chr2	90899084	90900500	-	90899998	90900500	3pMXE	0.33	50	50	ENSMUST00000133047.2	ENSMUSG00000002105.16	Slc39a13	chr2	protein_coding	solute carrier family 39 (metal ion transporter), member 13
chr2	90912868	90920159	+	90912868	90929775	A3SS	0.5	50	50	ENSMUST00000169852.2	ENSMUSG00000002111.9	Spi1	chr2	protein_coding	spleen focus forming virus (SFFV) proviral integration oncogene
chr2	90927338	90929775	+	90912868	90929775	A5SS	0.5	50	50	ENSMUST00000169852.2	ENSMUSG00000002111.9	Spi1	chr2	protein_coding	spleen focus forming virus (SFFV) proviral integration oncogene
chr2	90927338	90929745	+	90927338	90929775	A3SS	0.5	50	50	ENSMUST00000002180.8	ENSMUSG00000002111.9	Spi1	chr2	protein_coding	spleen focus forming virus (SFFV) proviral integration oncogene
chr2	90952300;90952687	90952685;90952981	+	90952300	90952981	cassetteExon	0.5	100	100	ENSMUST00000137942.8	ENSMUSG00000002100.16	Mybpc3	chr2	protein_coding	myosin binding protein C, cardiac
chr2	90948562	90949508	+	90948562	90949528	A3SS	0.5	50	50	ENSMUST00000137942.8	ENSMUSG00000002100.16	Mybpc3	chr2	protein_coding	myosin binding protein C, cardiac
chr2	90952300	90952981	+	90952300	90952685	A3SS&ES	0.5	50	50	ENSMUST00000111430.10	ENSMUSG00000002100.16	Mybpc3	chr2	protein_coding	myosin binding protein C, cardiac
chr2	90952687	90952981	+	90952687	90952984	A3SS	0.5	50	50	ENSMUST00000111430.10	ENSMUSG00000002100.16	Mybpc3	chr2	protein_coding	myosin binding protein C, cardiac
chr2	90969100	90973101	-	90969100;90970971	90970902;90973101	ES	0.33	50	50	ENSMUST00000111373.8	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	90988488	90989550	-	90988488;90988833	90988753;90989550	ES	0.5	50	50	ENSMUST00000111373.8	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	90970971;90971162	90971154;90973101	-	90970971	90973101	cassetteExon	0.5	100	100	ENSMUST00000111373.8	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	90985110;90985420	90985358;90985891	-	90985110	90985891	cassetteExon	0.5	100	100	ENSMUST00000111373.8	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	90989650;90990715	90990662;90992373	-	90989650	90992373	cassetteExon	0.5	100	100	ENSMUST00000111373.8	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	90993946;90994367	90994308;90995711	-	90993946	90995711	cassetteExon	0.5	100	100	ENSMUST00000111373.8	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	90991856	90992373	-	90989650	90992373	A3SS	0.33	50	50	ENSMUST00000111373.8	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	90973207	90973830	-	90973207	90973360	A5SS&ES	0.5	50	50	ENSMUST00000111373.8	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	90985993	90988431	-	90985993	90988330	A5SS	0.5	50	50	ENSMUST00000111373.8	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	90988488	90988750	-	90988488	90988753	A5SS	0.2	50	50	ENSMUST00000111373.8	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	90988488	90988762	-	90988488	90988753	A5SS	0.2	50	50	ENSMUST00000111373.8	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	90988488	90988807	-	90988488	90988753	A5SS	0.2	50	50	ENSMUST00000111373.8	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	90997030	90997259	-	90997030	90997388	A5SS	0.5	50	50	ENSMUST00000111373.8	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	90988488	90989550	-	90988488;90988833	90988750;90989550	ES	0.5	50	50	ENSMUST00000111375.8	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	90988488	90988762	-	90988488	90988750	A5SS	0.2	50	50	ENSMUST00000111375.8	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	90988488	90988807	-	90988488	90988750	A5SS	0.2	50	50	ENSMUST00000111375.8	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	90991856	90992373	-	90990715	90992373	A3SS	0.33	50	50	ENSMUST00000099725.9	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	90997435	90997873	-	90997512	90997873	A3SS	0.33	50	50	ENSMUST00000099725.9	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	90997437	90997873	-	90997512	90997873	A3SS	0.33	50	50	ENSMUST00000099725.9	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	90969100;90971162	90970902;90973101	-	90969100	90973101	cassetteExon	0.5	100	100	ENSMUST00000111369.8	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	91009666	91013316	-	91009666	91013141	5pMXE	0.25	50	50	ENSMUST00000111370.9	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	91009666	91014094	-	91009666	91013141	5pMXE	0.25	50	50	ENSMUST00000111370.9	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	91009666	91013137	-	91009666	91013141	A5SS	0.25	50	50	ENSMUST00000111370.9	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	90988488	90989550	-	90988488;90988833	90988762;90989550	ES	0.5	50	50	ENSMUST00000111376.8	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	91009666	91013316	-	91009666	91013137	5pMXE	0.25	50	50	ENSMUST00000111376.8	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	91009666	91014094	-	91009666	91013137	5pMXE	0.25	50	50	ENSMUST00000111376.8	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	90988488	90988807	-	90988488	90988762	A5SS	0.2	50	50	ENSMUST00000111376.8	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	91009666	91013316	-	91009666	91014094	A5SS	0.25	50	50	ENSMUST00000077941.13	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	90997435	90997873	-	90997435	90997853	A5SS	0.5	50	50	ENSMUST00000111371.8	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	90988488	90989550	-	90988488;90988833	90988807;90989550	ES	0.5	50	50	ENSMUST00000154028.8	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	90997437	90997873	-	90997435	90997873	A3SS	0.33	50	50	ENSMUST00000154028.8	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	90989650	90992373	-	90989650	90990662	5pMXE	0.5	50	50	ENSMUST00000146097.2	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	90988488	90989550	-	90988833	90989550	A3SS	0.5	50	50	ENSMUST00000146097.2	ENSMUSG00000040687.17	Madd	chr2	protein_coding	MAP-kinase activating death domain
chr2	91024041	91025378	-	91024041	91025310	5pMXE	0.2	50	50	ENSMUST00000150654.8	ENSMUSG00000002108.11	Nr1h3	chr2	protein_coding	nuclear receptor subfamily 1, group H, member 3
chr2	91024041	91033090	-	91024041	91025310	5pMXE	0.2	50	50	ENSMUST00000150654.8	ENSMUSG00000002108.11	Nr1h3	chr2	protein_coding	nuclear receptor subfamily 1, group H, member 3
chr2	91024041	91024998	-	91024041	91025310	A5SS	0.2	50	50	ENSMUST00000150654.8	ENSMUSG00000002108.11	Nr1h3	chr2	protein_coding	nuclear receptor subfamily 1, group H, member 3
chr2	91024041	91025076	-	91024041	91025310	A5SS	0.2	50	50	ENSMUST00000150654.8	ENSMUSG00000002108.11	Nr1h3	chr2	protein_coding	nuclear receptor subfamily 1, group H, member 3
chr2	91020629	91021084	-	91020629;91020986	91020807;91021084	ES	0.5	50	50	ENSMUST00000111356.8	ENSMUSG00000002108.11	Nr1h3	chr2	protein_coding	nuclear receptor subfamily 1, group H, member 3
chr2	91024041	91033090	-	91024041	91025076	5pMXE	0.2	50	50	ENSMUST00000111356.8	ENSMUSG00000002108.11	Nr1h3	chr2	protein_coding	nuclear receptor subfamily 1, group H, member 3
chr2	91024041	91024998	-	91024041	91025076	A5SS	0.2	50	50	ENSMUST00000111356.8	ENSMUSG00000002108.11	Nr1h3	chr2	protein_coding	nuclear receptor subfamily 1, group H, member 3
chr2	91024041	91025378	-	91024041	91025076	A5SS	0.2	50	50	ENSMUST00000111356.8	ENSMUSG00000002108.11	Nr1h3	chr2	protein_coding	nuclear receptor subfamily 1, group H, member 3
chr2	91024041	91025378	-	91024041	91024998	5pMXE	0.2	50	50	ENSMUST00000111355.8	ENSMUSG00000002108.11	Nr1h3	chr2	protein_coding	nuclear receptor subfamily 1, group H, member 3
chr2	91024041	91033090	-	91024041	91024998	5pMXE	0.2	50	50	ENSMUST00000111355.8	ENSMUSG00000002108.11	Nr1h3	chr2	protein_coding	nuclear receptor subfamily 1, group H, member 3
chr2	91024041	91033090	-	91024041	91025378	5pMXE	0.2	50	50	ENSMUST00000111354.2	ENSMUSG00000002108.11	Nr1h3	chr2	protein_coding	nuclear receptor subfamily 1, group H, member 3
chr2	91020629	91021084	-	91020986	91021084	A3SS	0.5	50	50	ENSMUST00000130031.2	ENSMUSG00000002108.11	Nr1h3	chr2	protein_coding	nuclear receptor subfamily 1, group H, member 3
chr2	91020629	91021084	-	91020629	91020807	A5SS	0.5	50	50	ENSMUST00000133261.2	ENSMUSG00000002108.11	Nr1h3	chr2	protein_coding	nuclear receptor subfamily 1, group H, member 3
chr2	91033393;91033665	91033611;91033946	+	91033393	91033946	cassetteExon	0.5	100	100	ENSMUST00000150403.8	ENSMUSG00000002103.17	Acp2	chr2	protein_coding	acid phosphatase 2, lysosomal
chr2	91036253;91036453	91036355;91036533	+	91036253	91036533	cassetteExon	0.5	100	100	ENSMUST00000150403.8	ENSMUSG00000002103.17	Acp2	chr2	protein_coding	acid phosphatase 2, lysosomal
chr2	91034041	91034573	+	91034041	91034585	A3SS	0.5	50	50	ENSMUST00000150403.8	ENSMUSG00000002103.17	Acp2	chr2	protein_coding	acid phosphatase 2, lysosomal
chr2	91036253	91036533	+	91036253	91036355	3pMXE	0.5	50	50	ENSMUST00000155418.2	ENSMUSG00000002103.17	Acp2	chr2	protein_coding	acid phosphatase 2, lysosomal
chr2	91047153	91047652	-	91047153;91047575	91047398;91047652	ES	0.5	50	50	ENSMUST00000152277.8	ENSMUSG00000002109.15	Ddb2	chr2	protein_coding	damage specific DNA binding protein 2
chr2	91047751;91049234	91049089;91064453	-	91047751	91064453	cassetteExon	0.5	100	100	ENSMUST00000152277.8	ENSMUSG00000002109.15	Ddb2	chr2	protein_coding	damage specific DNA binding protein 2
chr2	91047751	91064453	-	91042959	91064453	A3SS	0.33	50	50	ENSMUST00000150427.8	ENSMUSG00000002109.15	Ddb2	chr2	protein_coding	damage specific DNA binding protein 2
chr2	91049234	91064453	-	91042959	91064453	A3SS	0.33	50	50	ENSMUST00000150427.8	ENSMUSG00000002109.15	Ddb2	chr2	protein_coding	damage specific DNA binding protein 2
chr2	91042959	91047011	-	91042959	91064453	A5SS	0.5	50	50	ENSMUST00000150427.8	ENSMUSG00000002109.15	Ddb2	chr2	protein_coding	damage specific DNA binding protein 2
chr2	91086688	91090516	+	91086688;91090272	91090213;91090516	ES	0.33	50	50	ENSMUST00000134699.8	ENSMUSG00000027257.14	Pacsin3	chr2	protein_coding	protein kinase C and casein kinase substrate in neurons 3
chr2	91090272	91090546	+	91090272	91090516	A3SS	0.5	50	50	ENSMUST00000134699.8	ENSMUSG00000027257.14	Pacsin3	chr2	protein_coding	protein kinase C and casein kinase substrate in neurons 3
chr2	91087271	91090213	+	91086688	91090213	A5SS	0.33	50	50	ENSMUST00000134699.8	ENSMUSG00000027257.14	Pacsin3	chr2	protein_coding	protein kinase C and casein kinase substrate in neurons 3
chr2	91087271	91090516	+	91090272	91090516	A5SS&ES	0.33	50	50	ENSMUST00000134699.8	ENSMUSG00000027257.14	Pacsin3	chr2	protein_coding	protein kinase C and casein kinase substrate in neurons 3
chr2	91087921	91090213	+	91086688	91090213	A5SS	0.33	50	50	ENSMUST00000134699.8	ENSMUSG00000027257.14	Pacsin3	chr2	protein_coding	protein kinase C and casein kinase substrate in neurons 3
chr2	91086688	91090516	+	91090272	91090516	A5SS&ES	0.33	50	50	ENSMUST00000154959.8	ENSMUSG00000027257.14	Pacsin3	chr2	protein_coding	protein kinase C and casein kinase substrate in neurons 3
chr2	91087271	91090209	+	91086753	91090209	A5SS	0.25	50	50	ENSMUST00000154959.8	ENSMUSG00000027257.14	Pacsin3	chr2	protein_coding	protein kinase C and casein kinase substrate in neurons 3
chr2	91087921	91090209	+	91086753	91090209	A5SS	0.25	50	50	ENSMUST00000154959.8	ENSMUSG00000027257.14	Pacsin3	chr2	protein_coding	protein kinase C and casein kinase substrate in neurons 3
chr2	91089772	91090209	+	91086753	91090209	A5SS	0.25	50	50	ENSMUST00000154959.8	ENSMUSG00000027257.14	Pacsin3	chr2	protein_coding	protein kinase C and casein kinase substrate in neurons 3
chr2	91087271	91090516	+	91086688	91090516	A5SS	0.33	50	50	ENSMUST00000059566.11	ENSMUSG00000027257.14	Pacsin3	chr2	protein_coding	protein kinase C and casein kinase substrate in neurons 3
chr2	91087271;91090272	91090209;91090516	+	91087271	91090516	cassetteExon	0.5	100	100	ENSMUST00000144394.8	ENSMUSG00000027257.14	Pacsin3	chr2	protein_coding	protein kinase C and casein kinase substrate in neurons 3
chr2	91087271;91090272	91090213;91090516	+	91087271	91090516	cassetteExon	0.5	100	100	ENSMUST00000144394.8	ENSMUSG00000027257.14	Pacsin3	chr2	protein_coding	protein kinase C and casein kinase substrate in neurons 3
chr2	91087271	91090213	+	91087271	91090209	A3SS	0.33	50	50	ENSMUST00000028694.12	ENSMUSG00000027257.14	Pacsin3	chr2	protein_coding	protein kinase C and casein kinase substrate in neurons 3
chr2	91087921	91090209	+	91087271	91090209	A5SS	0.25	50	50	ENSMUST00000028694.12	ENSMUSG00000027257.14	Pacsin3	chr2	protein_coding	protein kinase C and casein kinase substrate in neurons 3
chr2	91089772	91090209	+	91087271	91090209	A5SS	0.25	50	50	ENSMUST00000028694.12	ENSMUSG00000027257.14	Pacsin3	chr2	protein_coding	protein kinase C and casein kinase substrate in neurons 3
chr2	91087921	91090213	+	91087271	91090213	A5SS	0.33	50	50	ENSMUST00000168916.8	ENSMUSG00000027257.14	Pacsin3	chr2	protein_coding	protein kinase C and casein kinase substrate in neurons 3
chr2	91087271	91090516	+	91087271	91090213	A3SS&ES	0.33	50	50	ENSMUST00000156919.8	ENSMUSG00000027257.14	Pacsin3	chr2	protein_coding	protein kinase C and casein kinase substrate in neurons 3
chr2	91087921	91090209	+	91087921	91090213	A3SS	0.5	50	50	ENSMUST00000111349.9	ENSMUSG00000027257.14	Pacsin3	chr2	protein_coding	protein kinase C and casein kinase substrate in neurons 3
chr2	91089772	91090209	+	91087921	91090209	A5SS	0.25	50	50	ENSMUST00000131711.8	ENSMUSG00000027257.14	Pacsin3	chr2	protein_coding	protein kinase C and casein kinase substrate in neurons 3
chr2	91098853;91099456	91099415;91099797	+	91098853	91099797	cassetteExon	0.5	100	100	ENSMUST00000080008.13	ENSMUSG00000027255.15	Arfgap2	chr2	protein_coding	ADP-ribosylation factor GTPase activating protein 2
chr2	91096160	91096571	+	91096035	91096571	A5SS	0.5	50	50	ENSMUST00000080008.13	ENSMUSG00000027255.15	Arfgap2	chr2	protein_coding	ADP-ribosylation factor GTPase activating protein 2
chr2	91214204	91274914	-	91214204;91252313	91252211;91274914	ES	0.33	50	50	ENSMUST00000064652.14	ENSMUSG00000040591.19	1110051M20Rik	chr2	protein_coding	RIKEN cDNA 1110051M20 gene
chr2	91252313;91255044	91254907;91274914	-	91252313	91274914	cassetteExon	0.5	100	100	ENSMUST00000064652.14	ENSMUSG00000040591.19	1110051M20Rik	chr2	protein_coding	RIKEN cDNA 1110051M20 gene
chr2	91109302	91109535	-	91107479	91109535	A3SS	0.5	50	50	ENSMUST00000064652.14	ENSMUSG00000040591.19	1110051M20Rik	chr2	protein_coding	RIKEN cDNA 1110051M20 gene
chr2	91249263	91252211	-	91214204	91252211	A3SS	0.5	50	50	ENSMUST00000064652.14	ENSMUSG00000040591.19	1110051M20Rik	chr2	protein_coding	RIKEN cDNA 1110051M20 gene
chr2	91255044	91274914	-	91214204	91274914	A3SS	0.33	50	50	ENSMUST00000094835.9	ENSMUSG00000040591.19	1110051M20Rik	chr2	protein_coding	RIKEN cDNA 1110051M20 gene
chr2	91431471	91437790	+	91431471;91436770	91436591;91437790	ES	0.5	50	50	ENSMUST00000111338.10	ENSMUSG00000040549.17	Ckap5	chr2	protein_coding	cytoskeleton associated protein 5
chr2	91429723;91429972	91429949;91430986	+	91429723	91430986	cassetteExon	0.5	100	100	ENSMUST00000111338.10	ENSMUSG00000040549.17	Ckap5	chr2	protein_coding	cytoskeleton associated protein 5
chr2	91446805	91450096	+	91446805	91450033	A3SS	0.5	50	50	ENSMUST00000111338.10	ENSMUSG00000040549.17	Ckap5	chr2	protein_coding	cytoskeleton associated protein 5
chr2	91357425	91376667	+	91357195	91376667	A5SS	0.5	50	50	ENSMUST00000111338.10	ENSMUSG00000040549.17	Ckap5	chr2	protein_coding	cytoskeleton associated protein 5
chr2	91431471	91437790	+	91431471	91436591	3pMXE	0.5	50	50	ENSMUST00000147809.8	ENSMUSG00000040549.17	Ckap5	chr2	protein_coding	cytoskeleton associated protein 5
chr2	91461171	91463324	-	91461171	91463321	A5SS	0.5	50	50	ENSMUST00000028681.15	ENSMUSG00000027249.16	F2	chr2	protein_coding	coagulation factor II
chr2	91478422;91479371	91479281;91479496	-	91478422	91479496	cassetteExon	0.5	100	100	ENSMUST00000099714.10	ENSMUSG00000075040.10	Zfp408	chr2	protein_coding	zinc finger protein 408
chr2	91479770	91479987	-	91479770	91480049	A5SS	0.5	50	50	ENSMUST00000099714.10	ENSMUSG00000075040.10	Zfp408	chr2	protein_coding	zinc finger protein 408
chr2	91478422	91479496	-	91479371	91479496	3pMXE	0.5	50	50	ENSMUST00000152769.2	ENSMUSG00000075040.10	Zfp408	chr2	protein_coding	zinc finger protein 408
chr2	91480597	91484418	+	91480597;91482168	91482109;91484418	ES	0.33	50	50	ENSMUST00000111329.8	ENSMUSG00000027247.17	Arhgap1	chr2	protein_coding	Rho GTPase activating protein 1
chr2	91484876;91485736	91485707;91492643	+	91484876	91492643	cassetteExon	0.5	100	100	ENSMUST00000111329.8	ENSMUSG00000027247.17	Arhgap1	chr2	protein_coding	Rho GTPase activating protein 1
chr2	91482168	91484391	+	91482168	91484418	A3SS	0.5	50	50	ENSMUST00000111329.8	ENSMUSG00000027247.17	Arhgap1	chr2	protein_coding	Rho GTPase activating protein 1
chr2	91481999	91482109	+	91480597	91482109	A5SS	0.5	50	50	ENSMUST00000111329.8	ENSMUSG00000027247.17	Arhgap1	chr2	protein_coding	Rho GTPase activating protein 1
chr2	91483896	91484418	+	91482168	91484418	A5SS	0.33	50	50	ENSMUST00000111329.8	ENSMUSG00000027247.17	Arhgap1	chr2	protein_coding	Rho GTPase activating protein 1
chr2	91500606	91500811	+	91500619	91500811	A5SS	0.5	50	50	ENSMUST00000111329.8	ENSMUSG00000027247.17	Arhgap1	chr2	protein_coding	Rho GTPase activating protein 1
chr2	91483896	91484418	+	91480597	91484418	A5SS	0.33	50	50	ENSMUST00000111331.9	ENSMUSG00000027247.17	Arhgap1	chr2	protein_coding	Rho GTPase activating protein 1
chr2	91480597	91484418	+	91480597	91482109	A3SS&ES	0.5	50	50	ENSMUST00000090614.11	ENSMUSG00000027247.17	Arhgap1	chr2	protein_coding	Rho GTPase activating protein 1
chr2	91480597	91484418	+	91482168	91484418	5pMXE	0.33	50	50	ENSMUST00000141012.2	ENSMUSG00000027247.17	Arhgap1	chr2	protein_coding	Rho GTPase activating protein 1
chr2	91509774	91510688	-	91509774;91510342	91510265;91510688	ES	0.5	50	50	ENSMUST00000076803.12	ENSMUSG00000027244.15	Atg13	chr2	protein_coding	autophagy related 13
chr2	91512040;91512481	91512371;91515014	-	91512040	91515014	cassetteExon	0.5	100	100	ENSMUST00000076803.12	ENSMUSG00000027244.15	Atg13	chr2	protein_coding	autophagy related 13
chr2	91522892;91524086	91523996;91524270	-	91522892	91524270	cassetteExon	0.5	100	100	ENSMUST00000076803.12	ENSMUSG00000027244.15	Atg13	chr2	protein_coding	autophagy related 13
chr2	91513246	91515014	-	91512040	91515014	A3SS	0.33	50	50	ENSMUST00000076803.12	ENSMUSG00000027244.15	Atg13	chr2	protein_coding	autophagy related 13
chr2	91526344	91535926	-	91526344	91540592	A5SS	0.5	50	50	ENSMUST00000076803.12	ENSMUSG00000027244.15	Atg13	chr2	protein_coding	autophagy related 13
chr2	91512481;91513246	91513148;91515014	-	91512481	91515014	cassetteExon	0.5	100	100	ENSMUST00000028678.9	ENSMUSG00000027244.15	Atg13	chr2	protein_coding	autophagy related 13
chr2	91512040	91515014	-	91512040	91512371	5pMXE	0.5	50	50	ENSMUST00000126000.8	ENSMUSG00000027244.15	Atg13	chr2	protein_coding	autophagy related 13
chr2	91541410	91542425	+	91541320	91542425	A5SS	0.33	50	50	ENSMUST00000128140.2	ENSMUSG00000027243.9	Harbi1	chr2	protein_coding	harbinger transposase derived 1
chr2	91541596	91542425	+	91541320	91542425	A5SS	0.33	50	50	ENSMUST00000128140.2	ENSMUSG00000027243.9	Harbi1	chr2	protein_coding	harbinger transposase derived 1
chr2	91541596	91542425	+	91541410	91542425	A5SS	0.33	50	50	ENSMUST00000140183.2	ENSMUSG00000027243.9	Harbi1	chr2	protein_coding	harbinger transposase derived 1
chr2	91543210	91548988	+	91543210	91550699	A3SS	0.5	50	50	ENSMUST00000090608.6	ENSMUSG00000027243.9	Harbi1	chr2	protein_coding	harbinger transposase derived 1
chr2	91604092	91640375	+	91604092;91635455	91635369;91640375	ES	0.5	50	50	ENSMUST00000099712.10	ENSMUSG00000040506.17	Ambra1	chr2	protein_coding	autophagy/beclin 1 regulator 1
chr2	91635455	91654805	+	91635455;91640554	91640375;91654805	ES	0.33	50	50	ENSMUST00000099712.10	ENSMUSG00000040506.17	Ambra1	chr2	protein_coding	autophagy/beclin 1 regulator 1
chr2	91642078	91654805	+	91640554	91654805	A5SS	0.33	50	50	ENSMUST00000099712.10	ENSMUSG00000040506.17	Ambra1	chr2	protein_coding	autophagy/beclin 1 regulator 1
chr2	91604092;91635455	91635369;91654805	+	91604092;91640554	91640375;91654805	MXE	0.5	100	100	ENSMUST00000111317.9	ENSMUSG00000040506.17	Ambra1	chr2	protein_coding	autophagy/beclin 1 regulator 1
chr2	91635455	91654805	+	91635455	91640375	3pMXE	0.5	50	50	ENSMUST00000156496.8	ENSMUSG00000040506.17	Ambra1	chr2	protein_coding	autophagy/beclin 1 regulator 1
chr2	91642078	91654805	+	91635455	91654805	A5SS	0.33	50	50	ENSMUST00000111316.9	ENSMUSG00000040506.17	Ambra1	chr2	protein_coding	autophagy/beclin 1 regulator 1
chr2	91761793	91762039	-	91761793	91761972	5pMXE	0.25	50	50	ENSMUST00000111309.8	ENSMUSG00000027239.15	Mdk	chr2	protein_coding	midkine
chr2	91761793	91762275	-	91761793	91761972	5pMXE	0.25	50	50	ENSMUST00000111309.8	ENSMUSG00000027239.15	Mdk	chr2	protein_coding	midkine
chr2	91761793	91761879	-	91761793	91761972	A5SS	0.25	50	50	ENSMUST00000111309.8	ENSMUSG00000027239.15	Mdk	chr2	protein_coding	midkine
chr2	91761793	91762275	-	91761793	91762039	5pMXE	0.25	50	50	ENSMUST00000069423.13	ENSMUSG00000027239.15	Mdk	chr2	protein_coding	midkine
chr2	91761793	91761879	-	91761793	91762039	A5SS	0.25	50	50	ENSMUST00000069423.13	ENSMUSG00000027239.15	Mdk	chr2	protein_coding	midkine
chr2	91761793	91761879	-	91761793	91762275	A5SS	0.25	50	50	ENSMUST00000028672.13	ENSMUSG00000027239.15	Mdk	chr2	protein_coding	midkine
chr2	91775214	91805912	-	91775214	91795765	5pMXE	0.2	50	50	ENSMUST00000128152.8	ENSMUSG00000040479.13	Dgkz	chr2	protein_coding	diacylglycerol kinase zeta
chr2	91766427	91766870	-	91766306	91766870	A3SS	0.5	50	50	ENSMUST00000128152.8	ENSMUSG00000040479.13	Dgkz	chr2	protein_coding	diacylglycerol kinase zeta
chr2	91773029	91774367	-	91773159	91774367	A3SS	0.5	50	50	ENSMUST00000128152.8	ENSMUSG00000040479.13	Dgkz	chr2	protein_coding	diacylglycerol kinase zeta
chr2	91773029	91795765	-	91775214	91795765	A3SS&ES	0.5	50	50	ENSMUST00000128152.8	ENSMUSG00000040479.13	Dgkz	chr2	protein_coding	diacylglycerol kinase zeta
chr2	91774814	91775519	-	91774814	91775106	A5SS&ES	0.5	50	50	ENSMUST00000128152.8	ENSMUSG00000040479.13	Dgkz	chr2	protein_coding	diacylglycerol kinase zeta
chr2	91775214	91775519	-	91775214	91795765	A5SS	0.2	50	50	ENSMUST00000128152.8	ENSMUSG00000040479.13	Dgkz	chr2	protein_coding	diacylglycerol kinase zeta
chr2	91775214	91776171	-	91775214	91795765	A5SS	0.2	50	50	ENSMUST00000128152.8	ENSMUSG00000040479.13	Dgkz	chr2	protein_coding	diacylglycerol kinase zeta
chr2	91775214	91793631	-	91775214	91795765	A5SS	0.2	50	50	ENSMUST00000128152.8	ENSMUSG00000040479.13	Dgkz	chr2	protein_coding	diacylglycerol kinase zeta
chr2	91773029	91795765	-	91773029	91774367	A5SS&ES	0.5	50	50	ENSMUST00000099709.10	ENSMUSG00000040479.13	Dgkz	chr2	protein_coding	diacylglycerol kinase zeta
chr2	91775214	91775519	-	91775214	91805912	A5SS	0.2	50	50	ENSMUST00000099709.10	ENSMUSG00000040479.13	Dgkz	chr2	protein_coding	diacylglycerol kinase zeta
chr2	91775214	91776171	-	91775214	91805912	A5SS	0.2	50	50	ENSMUST00000099709.10	ENSMUSG00000040479.13	Dgkz	chr2	protein_coding	diacylglycerol kinase zeta
chr2	91775214	91793631	-	91775214	91805912	A5SS	0.2	50	50	ENSMUST00000099709.10	ENSMUSG00000040479.13	Dgkz	chr2	protein_coding	diacylglycerol kinase zeta
chr2	91775214	91775519	-	91775214	91793631	A5SS	0.2	50	50	ENSMUST00000028667.10	ENSMUSG00000040479.13	Dgkz	chr2	protein_coding	diacylglycerol kinase zeta
chr2	91775214	91776171	-	91775214	91793631	A5SS	0.2	50	50	ENSMUST00000028667.10	ENSMUSG00000040479.13	Dgkz	chr2	protein_coding	diacylglycerol kinase zeta
chr2	91774814	91775519	-	91774814;91775214	91775106;91775519	ES	0.5	50	50	ENSMUST00000111303.2	ENSMUSG00000040479.13	Dgkz	chr2	protein_coding	diacylglycerol kinase zeta
chr2	91775214	91776171	-	91775214	91775519	A5SS	0.5	50	50	ENSMUST00000111303.2	ENSMUSG00000040479.13	Dgkz	chr2	protein_coding	diacylglycerol kinase zeta
chr2	92150804;92157509	92157258;92158657	+	92150804	92158657	cassetteExon	0.5	100	100	ENSMUST00000044036.15	ENSMUSG00000058318.16	Phf21a	chr2	protein_coding	PHD finger protein 21A
chr2	92150804;92157509	92157261;92158657	+	92150804	92158657	cassetteExon	0.5	100	100	ENSMUST00000044036.15	ENSMUSG00000058318.16	Phf21a	chr2	protein_coding	PHD finger protein 21A
chr2	92179793;92181976	92181954;92187209	+	92179793;92182209	92182046;92187209	MXE	0.5	100	100	ENSMUST00000044036.15	ENSMUSG00000058318.16	Phf21a	chr2	protein_coding	PHD finger protein 21A
chr2	92058826	92060983	+	92058826	92061004	A3SS	0.5	50	50	ENSMUST00000044036.15	ENSMUSG00000058318.16	Phf21a	chr2	protein_coding	PHD finger protein 21A
chr2	92150804	92158660	+	92150804	92158657	A3SS	0.25	50	50	ENSMUST00000044036.15	ENSMUSG00000058318.16	Phf21a	chr2	protein_coding	PHD finger protein 21A
chr2	92161153	92174893	+	92161153	92174889	A3SS	0.5	50	50	ENSMUST00000044036.15	ENSMUSG00000058318.16	Phf21a	chr2	protein_coding	PHD finger protein 21A
chr2	92189114	92189460	+	92189114	92189451	A3SS	0.5	50	50	ENSMUST00000044036.15	ENSMUSG00000058318.16	Phf21a	chr2	protein_coding	PHD finger protein 21A
chr2	92150804	92157258	+	92150804	92158660	A3SS	0.25	50	50	ENSMUST00000068702.14	ENSMUSG00000058318.16	Phf21a	chr2	protein_coding	PHD finger protein 21A
chr2	92150804	92157261	+	92150804	92158660	A3SS	0.25	50	50	ENSMUST00000068702.14	ENSMUSG00000058318.16	Phf21a	chr2	protein_coding	PHD finger protein 21A
chr2	92150804	92157261	+	92150804	92157258	A3SS	0.25	50	50	ENSMUST00000111290.10	ENSMUSG00000058318.16	Phf21a	chr2	protein_coding	PHD finger protein 21A
chr2	92014697;92017753	92017389;92044394	+	92014697	92044394	cassetteExon	0.5	100	100	ENSMUST00000111294.8	ENSMUSG00000058318.16	Phf21a	chr2	protein_coding	PHD finger protein 21A
chr2	92044434;92045920	92045794;92051817	+	92044434	92051817	cassetteExon	0.5	100	100	ENSMUST00000111294.8	ENSMUSG00000058318.16	Phf21a	chr2	protein_coding	PHD finger protein 21A
chr2	92044434;92045920	92045809;92051817	+	92044434	92051817	cassetteExon	0.5	100	100	ENSMUST00000111294.8	ENSMUSG00000058318.16	Phf21a	chr2	protein_coding	PHD finger protein 21A
chr2	92015182	92044394	+	92014697	92044394	A5SS	0.2	50	50	ENSMUST00000111294.8	ENSMUSG00000058318.16	Phf21a	chr2	protein_coding	PHD finger protein 21A
chr2	92016954	92044394	+	92014697	92044394	A5SS	0.2	50	50	ENSMUST00000111294.8	ENSMUSG00000058318.16	Phf21a	chr2	protein_coding	PHD finger protein 21A
chr2	92031883	92044394	+	92014697	92044394	A5SS	0.2	50	50	ENSMUST00000111294.8	ENSMUSG00000058318.16	Phf21a	chr2	protein_coding	PHD finger protein 21A
chr2	92044434	92045794	+	92044434	92045809	A3SS	0.33	50	50	ENSMUST00000111293.9	ENSMUSG00000058318.16	Phf21a	chr2	protein_coding	PHD finger protein 21A
chr2	92017753	92044394	+	92017753;92031883	92031857;92044394	ES	0.2	50	50	ENSMUST00000142528.8	ENSMUSG00000058318.16	Phf21a	chr2	protein_coding	PHD finger protein 21A
chr2	92015182	92044394	+	92031883	92044394	A5SS&ES	0.2	50	50	ENSMUST00000142528.8	ENSMUSG00000058318.16	Phf21a	chr2	protein_coding	PHD finger protein 21A
chr2	92016954	92017389	+	92014697	92017389	A5SS	0.5	50	50	ENSMUST00000142528.8	ENSMUSG00000058318.16	Phf21a	chr2	protein_coding	PHD finger protein 21A
chr2	92016954	92044394	+	92031883	92044394	A5SS&ES	0.2	50	50	ENSMUST00000142528.8	ENSMUSG00000058318.16	Phf21a	chr2	protein_coding	PHD finger protein 21A
chr2	92016954	92044394	+	92015182	92044394	A5SS	0.2	50	50	ENSMUST00000162188.8	ENSMUSG00000058318.16	Phf21a	chr2	protein_coding	PHD finger protein 21A
chr2	92017753	92044394	+	92015182	92044394	A5SS	0.2	50	50	ENSMUST00000162188.8	ENSMUSG00000058318.16	Phf21a	chr2	protein_coding	PHD finger protein 21A
chr2	92016954	92044394	+	92016954;92017753	92017378;92044394	ES	0.33	50	50	ENSMUST00000128781.9	ENSMUSG00000058318.16	Phf21a	chr2	protein_coding	PHD finger protein 21A
chr2	92016954	92017389	+	92016954	92017378	A3SS	0.33	50	50	ENSMUST00000128781.9	ENSMUSG00000058318.16	Phf21a	chr2	protein_coding	PHD finger protein 21A
chr2	92016954;92017753	92017389;92044394	+	92016954	92044394	cassetteExon	0.5	100	100	ENSMUST00000111291.9	ENSMUSG00000058318.16	Phf21a	chr2	protein_coding	PHD finger protein 21A
chr2	92150804	92158657	+	92150804	92157261	3pMXE	0.25	50	50	ENSMUST00000159366.8	ENSMUSG00000058318.16	Phf21a	chr2	protein_coding	PHD finger protein 21A
chr2	92198009	92199613	-	92198009;92198211	92198099;92199613	ES	0.5	50	50	ENSMUST00000176774.8	ENSMUSG00000040434.17	Large2	chr2	protein_coding	LARGE xylosyl- and glucuronyltransferase 2
chr2	92198211	92199835	-	92198211;92199717	92199613;92199835	ES	0.5	50	50	ENSMUST00000176774.8	ENSMUSG00000040434.17	Large2	chr2	protein_coding	LARGE xylosyl- and glucuronyltransferase 2
chr2	92201238	92202204	-	92201238	92201326	5pMXE	0.25	50	50	ENSMUST00000176774.8	ENSMUSG00000040434.17	Large2	chr2	protein_coding	LARGE xylosyl- and glucuronyltransferase 2
chr2	92201238	92202293	-	92201238	92201326	5pMXE	0.25	50	50	ENSMUST00000176774.8	ENSMUSG00000040434.17	Large2	chr2	protein_coding	LARGE xylosyl- and glucuronyltransferase 2
chr2	92201238	92205040	-	92201238	92201326	5pMXE	0.25	50	50	ENSMUST00000176774.8	ENSMUSG00000040434.17	Large2	chr2	protein_coding	LARGE xylosyl- and glucuronyltransferase 2
chr2	92200328	92200911	-	92200328	92200522	A5SS&ES	0.5	50	50	ENSMUST00000176774.8	ENSMUSG00000040434.17	Large2	chr2	protein_coding	LARGE xylosyl- and glucuronyltransferase 2
chr2	92200604	92200691	-	92200604	92200908	A5SS	0.33	50	50	ENSMUST00000176774.8	ENSMUSG00000040434.17	Large2	chr2	protein_coding	LARGE xylosyl- and glucuronyltransferase 2
chr2	92200604	92200911	-	92200604	92200908	A5SS	0.33	50	50	ENSMUST00000176774.8	ENSMUSG00000040434.17	Large2	chr2	protein_coding	LARGE xylosyl- and glucuronyltransferase 2
chr2	92200328	92200911	-	92200328;92200604	92200522;92200911	ES	0.5	50	50	ENSMUST00000068586.13	ENSMUSG00000040434.17	Large2	chr2	protein_coding	LARGE xylosyl- and glucuronyltransferase 2
chr2	92200604	92200691	-	92200604	92200911	A5SS	0.33	50	50	ENSMUST00000068586.13	ENSMUSG00000040434.17	Large2	chr2	protein_coding	LARGE xylosyl- and glucuronyltransferase 2
chr2	92201238	92205040	-	92201238	92202293	5pMXE	0.25	50	50	ENSMUST00000111284.9	ENSMUSG00000040434.17	Large2	chr2	protein_coding	LARGE xylosyl- and glucuronyltransferase 2
chr2	92201238	92202204	-	92201238	92202293	A5SS	0.25	50	50	ENSMUST00000111284.9	ENSMUSG00000040434.17	Large2	chr2	protein_coding	LARGE xylosyl- and glucuronyltransferase 2
chr2	92198009;92199717	92199613;92199835	-	92198009;92198211	92198099;92199835	MXE	0.5	100	100	ENSMUST00000090582.11	ENSMUSG00000040434.17	Large2	chr2	protein_coding	LARGE xylosyl- and glucuronyltransferase 2
chr2	92198211	92199835	-	92198211	92199613	5pMXE	0.5	50	50	ENSMUST00000176646.8	ENSMUSG00000040434.17	Large2	chr2	protein_coding	LARGE xylosyl- and glucuronyltransferase 2
chr2	92200328	92200911	-	92200604	92200911	A3SS	0.5	50	50	ENSMUST00000146311.8	ENSMUSG00000040434.17	Large2	chr2	protein_coding	LARGE xylosyl- and glucuronyltransferase 2
chr2	92201238	92202204	-	92201238	92205040	A5SS	0.25	50	50	ENSMUST00000176339.2	ENSMUSG00000040434.17	Large2	chr2	protein_coding	LARGE xylosyl- and glucuronyltransferase 2
chr2	92207048	92208036	+	92207048;92207908	92207775;92208036	ES	0.5	50	50	ENSMUST00000155891.8	ENSMUSG00000027222.15	Pex16	chr2	protein_coding	peroxisomal biogenesis factor 16
chr2	92206020	92206216	+	92205166	92206216	A5SS	0.5	50	50	ENSMUST00000155891.8	ENSMUSG00000027222.15	Pex16	chr2	protein_coding	peroxisomal biogenesis factor 16
chr2	92209060	92209141	+	92209018	92209141	A5SS	0.5	50	50	ENSMUST00000155891.8	ENSMUSG00000027222.15	Pex16	chr2	protein_coding	peroxisomal biogenesis factor 16
chr2	92213396	92213553	+	92213458	92213553	A5SS	0.5	50	50	ENSMUST00000191292.2	ENSMUSG00000044916.11	1700029I15Rik	chr2	protein_coding	RIKEN cDNA 1700029I15 gene
chr2	92213396	92213553	+	92213396	92215772	A3SS	0.5	50	50	ENSMUST00000111280.3	ENSMUSG00000044916.11	1700029I15Rik	chr2	protein_coding	RIKEN cDNA 1700029I15 gene
chr2	92221486	92231374	-	92221486	92222502	5pMXE	0.5	50	50	ENSMUST00000111279.9	ENSMUSG00000027223.16	Mapk8ip1	chr2	protein_coding	mitogen-activated protein kinase 8 interacting protein 1
chr2	92257355	92262508	-	92257355	92264157	A5SS	0.5	50	50	ENSMUST00000090559.12	ENSMUSG00000068742.12	Cry2	chr2	protein_coding	cryptochrome 2 (photolyase-like)
chr2	92289535	92289954	-	92289535	92290748	A5SS	0.5	50	50	ENSMUST00000125276.2	ENSMUSG00000049922.9	Slc35c1	chr2	protein_coding	solute carrier family 35, member C1
chr2	92844234	92876324	-	92844234	92875698	5pMXE	0.5	50	50	ENSMUST00000238863.2	ENSMUSG00000075028.13	Prdm11	chr2	protein_coding	PR domain containing 11
chr2	92819998	92823709	-	92811043	92823709	A3SS	0.5	50	50	ENSMUST00000238863.2	ENSMUSG00000075028.13	Prdm11	chr2	protein_coding	PR domain containing 11
chr2	92843761	92876324	-	92843761;92844234	92844110;92876324	ES	0.5	50	50	ENSMUST00000178666.8	ENSMUSG00000075028.13	Prdm11	chr2	protein_coding	PR domain containing 11
chr2	92843761	92876324	-	92843761	92844110	5pMXE	0.5	50	50	ENSMUST00000130441.2	ENSMUSG00000075028.13	Prdm11	chr2	protein_coding	PR domain containing 11
chr2	92860519	92860743	+	92860519	92860740	A3SS	0.5	50	50	ENSMUST00000111270.8	ENSMUSG00000075027.11	4631405J19Rik	chr2	lncRNA	RIKEN cDNA 4631405J19 gene
chr2	92860904	92863355	+	92862026	92863355	A5SS&ES	0.5	50	50	ENSMUST00000111270.8	ENSMUSG00000075027.11	4631405J19Rik	chr2	lncRNA	RIKEN cDNA 4631405J19 gene
chr2	92860904	92861221	+	92860904	92863355	A3SS	0.5	50	50	ENSMUST00000145926.2	ENSMUSG00000075027.11	4631405J19Rik	chr2	lncRNA	RIKEN cDNA 4631405J19 gene
chr2	93018092	93027242	+	93018092;93019568	93019434;93027242	ES	0.5	50	50	ENSMUST00000150462.8	ENSMUSG00000068735.15	Trp53i11	chr2	protein_coding	transformation related protein 53 inducible protein 11
chr2	93027323	93027957	+	93027323	93027954	A3SS	0.5	50	50	ENSMUST00000150462.8	ENSMUSG00000068735.15	Trp53i11	chr2	protein_coding	transformation related protein 53 inducible protein 11
chr2	93029336	93029738	+	93029336	93029702	A3SS	0.5	50	50	ENSMUST00000111266.8	ENSMUSG00000068735.15	Trp53i11	chr2	protein_coding	transformation related protein 53 inducible protein 11
chr2	93018092	93027242	+	93018092	93019434	3pMXE	0.5	50	50	ENSMUST00000132182.2	ENSMUSG00000068735.15	Trp53i11	chr2	protein_coding	transformation related protein 53 inducible protein 11
chr2	93018092	93027242	+	93019568	93027242	5pMXE	0.5	50	50	ENSMUST00000127173.2	ENSMUSG00000068735.15	Trp53i11	chr2	protein_coding	transformation related protein 53 inducible protein 11
chr2	93125622	93142292	-	93054923	93142292	A3SS	0.33	50	50	ENSMUST00000111265.9	ENSMUSG00000027217.14	Tspan18	chr2	protein_coding	tetraspanin 18
chr2	93141966	93142292	-	93054923	93142292	A3SS	0.33	50	50	ENSMUST00000111265.9	ENSMUSG00000027217.14	Tspan18	chr2	protein_coding	tetraspanin 18
chr2	93054923	93057896	-	93054923	93142292	A5SS	0.5	50	50	ENSMUST00000111265.9	ENSMUSG00000027217.14	Tspan18	chr2	protein_coding	tetraspanin 18
chr2	93142372	93142492	-	93142372	93164617	A5SS	0.5	50	50	ENSMUST00000111265.9	ENSMUSG00000027217.14	Tspan18	chr2	protein_coding	tetraspanin 18
chr2	93141966	93142292	-	93125622	93142292	A3SS	0.33	50	50	ENSMUST00000154951.8	ENSMUSG00000027217.14	Tspan18	chr2	protein_coding	tetraspanin 18
chr2	93267815;93273789	93273714;93292675	-	93267815	93292675	cassetteExon	0.5	100	100	ENSMUST00000099696.8	ENSMUSG00000027215.14	Cd82	chr2	protein_coding	CD82 antigen
chr2	93282098	93292675	-	93267815	93292675	A3SS	0.33	50	50	ENSMUST00000099696.8	ENSMUSG00000027215.14	Cd82	chr2	protein_coding	CD82 antigen
chr2	93273789	93293051	-	93273789	93292675	5pMXE	0.14	50	50	ENSMUST00000028644.11	ENSMUSG00000027215.14	Cd82	chr2	protein_coding	CD82 antigen
chr2	93273789	93293255	-	93273789	93292675	5pMXE	0.14	50	50	ENSMUST00000028644.11	ENSMUSG00000027215.14	Cd82	chr2	protein_coding	CD82 antigen
chr2	93273789;93282098	93282012;93292675	-	93273789	93292675	cassetteExon	0.5	100	100	ENSMUST00000028644.11	ENSMUSG00000027215.14	Cd82	chr2	protein_coding	CD82 antigen
chr2	93273789	93282870	-	93273789	93292675	A5SS	0.14	50	50	ENSMUST00000028644.11	ENSMUSG00000027215.14	Cd82	chr2	protein_coding	CD82 antigen
chr2	93273789	93282954	-	93273789	93292675	A5SS	0.14	50	50	ENSMUST00000028644.11	ENSMUSG00000027215.14	Cd82	chr2	protein_coding	CD82 antigen
chr2	93273789	93292145	-	93273789	93292675	A5SS	0.14	50	50	ENSMUST00000028644.11	ENSMUSG00000027215.14	Cd82	chr2	protein_coding	CD82 antigen
chr2	93267815	93292675	-	93267815	93273714	A5SS&ES	0.5	50	50	ENSMUST00000116457.9	ENSMUSG00000027215.14	Cd82	chr2	protein_coding	CD82 antigen
chr2	93273789	93282012	-	93273789	93293255	A5SS	0.14	50	50	ENSMUST00000116457.9	ENSMUSG00000027215.14	Cd82	chr2	protein_coding	CD82 antigen
chr2	93273789	93282870	-	93273789	93293255	A5SS	0.14	50	50	ENSMUST00000116457.9	ENSMUSG00000027215.14	Cd82	chr2	protein_coding	CD82 antigen
chr2	93273789	93282954	-	93273789	93293255	A5SS	0.14	50	50	ENSMUST00000116457.9	ENSMUSG00000027215.14	Cd82	chr2	protein_coding	CD82 antigen
chr2	93273789	93292145	-	93273789	93293255	A5SS	0.14	50	50	ENSMUST00000116457.9	ENSMUSG00000027215.14	Cd82	chr2	protein_coding	CD82 antigen
chr2	93273789	93293051	-	93273789	93293255	A5SS	0.14	50	50	ENSMUST00000116457.9	ENSMUSG00000027215.14	Cd82	chr2	protein_coding	CD82 antigen
chr2	93273789	93292145	-	93273789	93282954	5pMXE	0.14	50	50	ENSMUST00000111257.8	ENSMUSG00000027215.14	Cd82	chr2	protein_coding	CD82 antigen
chr2	93273789	93293051	-	93273789	93282954	5pMXE	0.14	50	50	ENSMUST00000111257.8	ENSMUSG00000027215.14	Cd82	chr2	protein_coding	CD82 antigen
chr2	93273789	93282012	-	93273789	93282954	A5SS	0.14	50	50	ENSMUST00000111257.8	ENSMUSG00000027215.14	Cd82	chr2	protein_coding	CD82 antigen
chr2	93273789	93282870	-	93273789	93282954	A5SS	0.14	50	50	ENSMUST00000111257.8	ENSMUSG00000027215.14	Cd82	chr2	protein_coding	CD82 antigen
chr2	93273789	93282870	-	93273789	93282012	A5SS&ES	0.2	50	50	ENSMUST00000123565.8	ENSMUSG00000027215.14	Cd82	chr2	protein_coding	CD82 antigen
chr2	93273789	93292145	-	93273789	93282012	A5SS&ES	0.2	50	50	ENSMUST00000123565.8	ENSMUSG00000027215.14	Cd82	chr2	protein_coding	CD82 antigen
chr2	93273789	93292145	-	93273789	93282870	5pMXE	0.14	50	50	ENSMUST00000145553.8	ENSMUSG00000027215.14	Cd82	chr2	protein_coding	CD82 antigen
chr2	93273789	93293051	-	93273789	93282870	5pMXE	0.14	50	50	ENSMUST00000145553.8	ENSMUSG00000027215.14	Cd82	chr2	protein_coding	CD82 antigen
chr2	93273789	93293051	-	93273789	93292145	5pMXE	0.14	50	50	ENSMUST00000150508.8	ENSMUSG00000027215.14	Cd82	chr2	protein_coding	CD82 antigen
chr2	93273789	93282012	-	93273789	93293051	A5SS	0.14	50	50	ENSMUST00000124804.3	ENSMUSG00000027215.14	Cd82	chr2	protein_coding	CD82 antigen
chr2	93286208	93286391	+	93286208	93295656	A3SS	0.5	50	50	ENSMUST00000099693.9	ENSMUSG00000075025.11	Gm10804	chr2	lncRNA	predicted gene 10804
chr2	93295800	93296403	+	93295800	93297557	A3SS	0.5	50	50	ENSMUST00000099693.9	ENSMUSG00000075025.11	Gm10804	chr2	lncRNA	predicted gene 10804
chr2	93644309	93652732	-	93644309;93650494	93650375;93652732	ES	0.33	50	50	ENSMUST00000184931.8	ENSMUSG00000027198.17	Ext2	chr2	protein_coding	exostosin glycosyltransferase 2
chr2	93644309;93652026	93651955;93652732	-	93644309;93650494	93650375;93652732	MXE	0.5	100	100	ENSMUST00000184931.8	ENSMUSG00000027198.17	Ext2	chr2	protein_coding	exostosin glycosyltransferase 2
chr2	93650494;93652026	93651955;93652732	-	93650494	93652732	cassetteExon	0.5	100	100	ENSMUST00000184931.8	ENSMUSG00000027198.17	Ext2	chr2	protein_coding	exostosin glycosyltransferase 2
chr2	93537722	93560503	-	93492026	93560503	A3SS	0.33	50	50	ENSMUST00000184931.8	ENSMUSG00000027198.17	Ext2	chr2	protein_coding	exostosin glycosyltransferase 2
chr2	93548156	93560503	-	93492026	93560503	A3SS	0.33	50	50	ENSMUST00000184931.8	ENSMUSG00000027198.17	Ext2	chr2	protein_coding	exostosin glycosyltransferase 2
chr2	93606426	93621355	-	93593029	93621355	A3SS	0.5	50	50	ENSMUST00000184931.8	ENSMUSG00000027198.17	Ext2	chr2	protein_coding	exostosin glycosyltransferase 2
chr2	93644309;93652026	93651955;93652732	-	93644309	93652732	cassetteExon	0.5	100	100	ENSMUST00000028623.13	ENSMUSG00000027198.17	Ext2	chr2	protein_coding	exostosin glycosyltransferase 2
chr2	93534334	93534828	-	93533621	93534828	A3SS	0.5	50	50	ENSMUST00000028623.13	ENSMUSG00000027198.17	Ext2	chr2	protein_coding	exostosin glycosyltransferase 2
chr2	93548156	93560503	-	93537722	93560503	A3SS	0.5	50	50	ENSMUST00000028623.13	ENSMUSG00000027198.17	Ext2	chr2	protein_coding	exostosin glycosyltransferase 2
chr2	93644309;93650494	93650375;93651955	-	93644309	93651955	cassetteExon	0.5	100	100	ENSMUST00000145838.8	ENSMUSG00000027198.17	Ext2	chr2	protein_coding	exostosin glycosyltransferase 2
chr2	93672307	93673264	-	93672307;93672960	93672894;93673264	ES	0.5	50	50	ENSMUST00000111246.8	ENSMUSG00000040272.15	Accs	chr2	protein_coding	1-aminocyclopropane-1-carboxylate synthase (non-functional)
chr2	93678531	93680110	-	93678552	93680110	A3SS	0.33	50	50	ENSMUST00000111246.8	ENSMUSG00000040272.15	Accs	chr2	protein_coding	1-aminocyclopropane-1-carboxylate synthase (non-functional)
chr2	93678534	93680110	-	93678552	93680110	A3SS	0.33	50	50	ENSMUST00000111246.8	ENSMUSG00000040272.15	Accs	chr2	protein_coding	1-aminocyclopropane-1-carboxylate synthase (non-functional)
chr2	93678552	93679955	-	93678552	93680110	A5SS	0.5	50	50	ENSMUST00000111246.8	ENSMUSG00000040272.15	Accs	chr2	protein_coding	1-aminocyclopropane-1-carboxylate synthase (non-functional)
chr2	93678531	93680110	-	93678531	93679890	A5SS	0.5	50	50	ENSMUST00000041593.15	ENSMUSG00000040272.15	Accs	chr2	protein_coding	1-aminocyclopropane-1-carboxylate synthase (non-functional)
chr2	93678531	93680110	-	93678534	93680110	A3SS	0.33	50	50	ENSMUST00000146436.8	ENSMUSG00000040272.15	Accs	chr2	protein_coding	1-aminocyclopropane-1-carboxylate synthase (non-functional)
chr2	93672307	93673264	-	93672960	93673264	3pMXE	0.5	50	50	ENSMUST00000130077.2	ENSMUSG00000040272.15	Accs	chr2	protein_coding	1-aminocyclopropane-1-carboxylate synthase (non-functional)
chr2	93694796	93699367	-	93694796;93696574	93696027;93699367	ES	0.25	50	50	ENSMUST00000099690.4	ENSMUSG00000075023.12	Accsl	chr2	protein_coding	1-aminocyclopropane-1-carboxylate synthase (non-functional)-like
chr2	93686125;93686325	93686249;93687042	-	93686125	93687042	cassetteExon	0.5	100	100	ENSMUST00000099690.4	ENSMUSG00000075023.12	Accsl	chr2	protein_coding	1-aminocyclopropane-1-carboxylate synthase (non-functional)-like
chr2	93696574;93698990	93698784;93699367	-	93696574	93699367	cassetteExon	0.5	100	100	ENSMUST00000099690.4	ENSMUSG00000075023.12	Accsl	chr2	protein_coding	1-aminocyclopropane-1-carboxylate synthase (non-functional)-like
chr2	93696574;93699032	93698784;93699367	-	93696574	93699367	cassetteExon	0.5	100	100	ENSMUST00000099690.4	ENSMUSG00000075023.12	Accsl	chr2	protein_coding	1-aminocyclopropane-1-carboxylate synthase (non-functional)-like
chr2	93687162	93687290	-	93687195	93687290	A3SS	0.5	50	50	ENSMUST00000099690.4	ENSMUSG00000075023.12	Accsl	chr2	protein_coding	1-aminocyclopropane-1-carboxylate synthase (non-functional)-like
chr2	93693514	93694576	-	93693514	93694264	A5SS&ES	0.5	50	50	ENSMUST00000099690.4	ENSMUSG00000075023.12	Accsl	chr2	protein_coding	1-aminocyclopropane-1-carboxylate synthase (non-functional)-like
chr2	93694796	93695078	-	93694796	93696027	A5SS	0.33	50	50	ENSMUST00000099690.4	ENSMUSG00000075023.12	Accsl	chr2	protein_coding	1-aminocyclopropane-1-carboxylate synthase (non-functional)-like
chr2	93694796	93699367	-	93694796	93695078	5pMXE	0.33	50	50	ENSMUST00000141561.8	ENSMUSG00000075023.12	Accsl	chr2	protein_coding	1-aminocyclopropane-1-carboxylate synthase (non-functional)-like
chr2	93696574	93699367	-	93694796	93699367	A3SS	0.25	50	50	ENSMUST00000129248.2	ENSMUSG00000075023.12	Accsl	chr2	protein_coding	1-aminocyclopropane-1-carboxylate synthase (non-functional)-like
chr2	93698990	93699367	-	93694796	93699367	A3SS	0.25	50	50	ENSMUST00000129248.2	ENSMUSG00000075023.12	Accsl	chr2	protein_coding	1-aminocyclopropane-1-carboxylate synthase (non-functional)-like
chr2	93699032	93699367	-	93694796	93699367	A3SS	0.25	50	50	ENSMUST00000129248.2	ENSMUSG00000075023.12	Accsl	chr2	protein_coding	1-aminocyclopropane-1-carboxylate synthase (non-functional)-like
chr2	93694796	93696027	-	93694796	93699367	A5SS	0.33	50	50	ENSMUST00000129248.2	ENSMUSG00000075023.12	Accsl	chr2	protein_coding	1-aminocyclopropane-1-carboxylate synthase (non-functional)-like
chr2	93698990	93699367	-	93699032	93699367	A3SS	0.33	50	50	ENSMUST00000143033.8	ENSMUSG00000075023.12	Accsl	chr2	protein_coding	1-aminocyclopropane-1-carboxylate synthase (non-functional)-like
chr2	93696574	93699367	-	93696574	93698784	5pMXE	0.5	50	50	ENSMUST00000128995.2	ENSMUSG00000075023.12	Accsl	chr2	protein_coding	1-aminocyclopropane-1-carboxylate synthase (non-functional)-like
chr2	93811959	93826528	-	93787872	93826528	A3SS	0.5	50	50	ENSMUST00000183110.2	ENSMUSG00000098004.2	Gm27027	chr2	protein_coding	predicted gene, 27027
chr2	93811959	93815045	-	93811959;93814121	93814039;93815045	ES	0.5	50	50	ENSMUST00000125473.8	ENSMUSG00000040174.15	Alkbh3	chr2	protein_coding	alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase
chr2	93811959	93826528	-	93811959	93815045	5pMXE	0.33	50	50	ENSMUST00000126255.2	ENSMUSG00000040174.15	Alkbh3	chr2	protein_coding	alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase
chr2	93826737	93833398	-	93826737;93831858	93831770;93833398	ES	0.5	50	50	ENSMUST00000111240.8	ENSMUSG00000040174.15	Alkbh3	chr2	protein_coding	alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase
chr2	93838937;93840753	93840608;93841028	-	93838937	93841028	cassetteExon	0.5	100	100	ENSMUST00000111240.8	ENSMUSG00000040174.15	Alkbh3	chr2	protein_coding	alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase
chr2	93836182	93837192	-	93835125	93837192	A3SS	0.5	50	50	ENSMUST00000111240.8	ENSMUSG00000040174.15	Alkbh3	chr2	protein_coding	alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase
chr2	93838487	93838769	-	93838471	93838769	A3SS	0.5	50	50	ENSMUST00000111240.8	ENSMUSG00000040174.15	Alkbh3	chr2	protein_coding	alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase
chr2	93811959	93814039	-	93811959	93826528	A5SS	0.33	50	50	ENSMUST00000111240.8	ENSMUSG00000040174.15	Alkbh3	chr2	protein_coding	alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase
chr2	93838487	93838769	-	93838487	93838788	A5SS	0.5	50	50	ENSMUST00000040005.13	ENSMUSG00000040174.15	Alkbh3	chr2	protein_coding	alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase
chr2	93838937	93841028	-	93838937	93840608	5pMXE	0.5	50	50	ENSMUST00000138046.8	ENSMUSG00000040174.15	Alkbh3	chr2	protein_coding	alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase
chr2	93874283;93875787	93875706;93882599	-	93874283	93882599	cassetteExon	0.5	100	100	ENSMUST00000145967.8	ENSMUSG00000027195.11	Hsd17b12	chr2	protein_coding	hydroxysteroid (17-beta) dehydrogenase 12
chr2	93913619	93947775	-	93913619;93945413	93945338;93947775	ES	0.5	50	50	ENSMUST00000028619.5	ENSMUSG00000027195.11	Hsd17b12	chr2	protein_coding	hydroxysteroid (17-beta) dehydrogenase 12
chr2	93947824	93988055	-	93947821	93988055	A3SS	0.5	50	50	ENSMUST00000028619.5	ENSMUSG00000027195.11	Hsd17b12	chr2	protein_coding	hydroxysteroid (17-beta) dehydrogenase 12
chr2	93896818	93897025	-	93896818	93913512	A5SS	0.5	50	50	ENSMUST00000028619.5	ENSMUSG00000027195.11	Hsd17b12	chr2	protein_coding	hydroxysteroid (17-beta) dehydrogenase 12
chr2	93913619	93947775	-	93945413	93947775	3pMXE	0.5	50	50	ENSMUST00000141955.2	ENSMUSG00000027195.11	Hsd17b12	chr2	protein_coding	hydroxysteroid (17-beta) dehydrogenase 12
chr2	93991553	94014912	-	93991553;93997335	93997189;94014912	ES	0.5	50	50	ENSMUST00000210851.2	ENSMUSG00000075020.7	Mir670hg	chr2	lncRNA	MIR670 host gene (non-protein coding)
chr2	94082860	94094867	-	94076422	94094867	A3SS	0.25	50	50	ENSMUST00000210851.2	ENSMUSG00000075020.7	Mir670hg	chr2	lncRNA	MIR670 host gene (non-protein coding)
chr2	94084161	94094867	-	94076422	94094867	A3SS	0.25	50	50	ENSMUST00000210851.2	ENSMUSG00000075020.7	Mir670hg	chr2	lncRNA	MIR670 host gene (non-protein coding)
chr2	94091666	94094867	-	94076422	94094867	A3SS	0.25	50	50	ENSMUST00000210851.2	ENSMUSG00000075020.7	Mir670hg	chr2	lncRNA	MIR670 host gene (non-protein coding)
chr2	93997335	94008948	-	93997335	94014912	A5SS	0.5	50	50	ENSMUST00000210851.2	ENSMUSG00000075020.7	Mir670hg	chr2	lncRNA	MIR670 host gene (non-protein coding)
chr2	94068732	94073658	-	94068732	94076409	A5SS	0.5	50	50	ENSMUST00000210851.2	ENSMUSG00000075020.7	Mir670hg	chr2	lncRNA	MIR670 host gene (non-protein coding)
chr2	94082860	94094867	-	94082860;94084161	94084068;94094867	ES	0.33	50	50	ENSMUST00000211619.2	ENSMUSG00000075020.7	Mir670hg	chr2	lncRNA	MIR670 host gene (non-protein coding)
chr2	94091666	94094867	-	94084161	94094867	A3SS	0.33	50	50	ENSMUST00000211619.2	ENSMUSG00000075020.7	Mir670hg	chr2	lncRNA	MIR670 host gene (non-protein coding)
chr2	94091666	94094867	-	94082860	94094867	A3SS	0.25	50	50	ENSMUST00000129661.2	ENSMUSG00000075020.7	Mir670hg	chr2	lncRNA	MIR670 host gene (non-protein coding)
chr2	94163397	94189096	-	94163397;94173142	94172972;94189096	ES	0.5	50	50	ENSMUST00000055081.14	ENSMUSG00000027194.17	Ttc17	chr2	protein_coding	tetratricopeptide repeat domain 17
chr2	94158830	94160863	-	94157163	94160863	A3SS	0.5	50	50	ENSMUST00000055081.14	ENSMUSG00000027194.17	Ttc17	chr2	protein_coding	tetratricopeptide repeat domain 17
chr2	94216526	94235235	-	94216526	94236852	A5SS	0.5	50	50	ENSMUST00000111237.9	ENSMUSG00000027194.17	Ttc17	chr2	protein_coding	tetratricopeptide repeat domain 17
chr2	94260185	94261952	-	94260185	94268269	A5SS	0.5	50	50	ENSMUST00000028617.7	ENSMUSG00000027193.13	Api5	chr2	protein_coding	apoptosis inhibitor 5
chr2	96925095;97062097	97061882;97256956	+	96925095	97256956	cassetteExon	0.5	100	100	ENSMUST00000135431.8	ENSMUSG00000050587.15	Lrrc4c	chr2	protein_coding	leucine rich repeat containing 4C
chr2	97298765	97433834	+	97257049	97433834	A5SS	0.5	50	50	ENSMUST00000135431.8	ENSMUSG00000050587.15	Lrrc4c	chr2	protein_coding	leucine rich repeat containing 4C
chr2	97298765	97459334	+	97433885	97459334	A5SS&ES	0.5	50	50	ENSMUST00000135431.8	ENSMUSG00000050587.15	Lrrc4c	chr2	protein_coding	leucine rich repeat containing 4C
chr2	97298765	97459334	+	97298765;97433885	97433834;97459334	ES	0.5	50	50	ENSMUST00000059049.8	ENSMUSG00000050587.15	Lrrc4c	chr2	protein_coding	leucine rich repeat containing 4C
chr2	101392699	101413866	-	101392699;101406496	101406357;101413866	ES	0.5	50	50	ENSMUST00000111231.10	ENSMUSG00000027165.17	Iftap	chr2	protein_coding	intraflagellar transport associated protein
chr2	101441020	101460686	-	101441020	101459226	5pMXE	0.2	50	50	ENSMUST00000111231.10	ENSMUSG00000027165.17	Iftap	chr2	protein_coding	intraflagellar transport associated protein
chr2	101441020	101479767	-	101441020	101459226	5pMXE	0.2	50	50	ENSMUST00000111231.10	ENSMUSG00000027165.17	Iftap	chr2	protein_coding	intraflagellar transport associated protein
chr2	101392699;101396807	101396693;101406357	-	101392699	101406357	cassetteExon	0.5	100	100	ENSMUST00000111231.10	ENSMUSG00000027165.17	Iftap	chr2	protein_coding	intraflagellar transport associated protein
chr2	101392699	101406405	-	101392699	101406357	A5SS	0.25	50	50	ENSMUST00000111231.10	ENSMUSG00000027165.17	Iftap	chr2	protein_coding	intraflagellar transport associated protein
chr2	101441020	101451243	-	101441020	101459226	A5SS	0.2	50	50	ENSMUST00000111231.10	ENSMUSG00000027165.17	Iftap	chr2	protein_coding	intraflagellar transport associated protein
chr2	101441020	101458564	-	101441020	101459226	A5SS	0.2	50	50	ENSMUST00000111231.10	ENSMUSG00000027165.17	Iftap	chr2	protein_coding	intraflagellar transport associated protein
chr2	101392699;101406496	101406405;101413866	-	101392699	101413866	cassetteExon	0.5	100	100	ENSMUST00000136601.9	ENSMUSG00000027165.17	Iftap	chr2	protein_coding	intraflagellar transport associated protein
chr2	101392699	101396693	-	101392699	101413866	A5SS	0.25	50	50	ENSMUST00000136601.9	ENSMUSG00000027165.17	Iftap	chr2	protein_coding	intraflagellar transport associated protein
chr2	101441020	101458564	-	101441020	101451243	5pMXE	0.2	50	50	ENSMUST00000090513.11	ENSMUSG00000027165.17	Iftap	chr2	protein_coding	intraflagellar transport associated protein
chr2	101441020	101460686	-	101441020	101451243	5pMXE	0.2	50	50	ENSMUST00000090513.11	ENSMUSG00000027165.17	Iftap	chr2	protein_coding	intraflagellar transport associated protein
chr2	101441020	101479767	-	101441020	101451243	5pMXE	0.2	50	50	ENSMUST00000090513.11	ENSMUSG00000027165.17	Iftap	chr2	protein_coding	intraflagellar transport associated protein
chr2	101441020;101460893	101460686;101479767	-	101441020	101479767	cassetteExon	0.5	100	100	ENSMUST00000160722.8	ENSMUSG00000027165.17	Iftap	chr2	protein_coding	intraflagellar transport associated protein
chr2	101475154	101479767	-	101441020	101479767	A3SS	0.33	50	50	ENSMUST00000160722.8	ENSMUSG00000027165.17	Iftap	chr2	protein_coding	intraflagellar transport associated protein
chr2	101441020	101458564	-	101441020	101479767	A5SS	0.2	50	50	ENSMUST00000160722.8	ENSMUSG00000027165.17	Iftap	chr2	protein_coding	intraflagellar transport associated protein
chr2	101475154	101479767	-	101460893	101479767	A3SS	0.33	50	50	ENSMUST00000160037.8	ENSMUSG00000027165.17	Iftap	chr2	protein_coding	intraflagellar transport associated protein
chr2	101441020	101458564	-	101441020	101460686	A5SS	0.2	50	50	ENSMUST00000160037.8	ENSMUSG00000027165.17	Iftap	chr2	protein_coding	intraflagellar transport associated protein
chr2	101392699	101413866	-	101392699	101406405	5pMXE	0.25	50	50	ENSMUST00000177152.2	ENSMUSG00000027165.17	Iftap	chr2	protein_coding	intraflagellar transport associated protein
chr2	101392699	101396693	-	101392699	101406405	A5SS	0.25	50	50	ENSMUST00000177152.2	ENSMUSG00000027165.17	Iftap	chr2	protein_coding	intraflagellar transport associated protein
chr2	101392699	101413866	-	101406496	101413866	3pMXE	0.5	50	50	ENSMUST00000128898.3	ENSMUSG00000027165.17	Iftap	chr2	protein_coding	intraflagellar transport associated protein
chr2	101455215	101459667	+	101455215;101458544	101458482;101459667	ES	0.5	50	50	ENSMUST00000044031.4	ENSMUSG00000032864.5	Rag2	chr2	protein_coding	recombination activating gene 2
chr2	101508965;101511372	101511170;101514824	+	101508965	101514824	cassetteExon	0.5	100	100	ENSMUST00000143341.2	ENSMUSG00000027164.9	Traf6	chr2	protein_coding	TNF receptor-associated factor 6
chr2	101602753	101628289	-	101602753	101627766	5pMXE	0.16	50	50	ENSMUST00000171088.8	ENSMUSG00000032841.16	Prr5l	chr2	protein_coding	proline rich 5 like
chr2	101602753	101644616	-	101602753	101627766	5pMXE	0.16	50	50	ENSMUST00000171088.8	ENSMUSG00000032841.16	Prr5l	chr2	protein_coding	proline rich 5 like
chr2	101602753	101668529	-	101602753	101627766	5pMXE	0.16	50	50	ENSMUST00000171088.8	ENSMUSG00000032841.16	Prr5l	chr2	protein_coding	proline rich 5 like
chr2	101602753	101713286	-	101602753	101627766	5pMXE	0.16	50	50	ENSMUST00000171088.8	ENSMUSG00000032841.16	Prr5l	chr2	protein_coding	proline rich 5 like
chr2	101602753	101627817	-	101602753	101627766	A5SS	0.16	50	50	ENSMUST00000171088.8	ENSMUSG00000032841.16	Prr5l	chr2	protein_coding	proline rich 5 like
chr2	101565090	101627766	-	101565090	101571632	A5SS&ES	0.5	50	50	ENSMUST00000163762.8	ENSMUSG00000032841.16	Prr5l	chr2	protein_coding	proline rich 5 like
chr2	101602753	101627817	-	101602753	101668529	A5SS	0.2	50	50	ENSMUST00000163762.8	ENSMUSG00000032841.16	Prr5l	chr2	protein_coding	proline rich 5 like
chr2	101602753	101628289	-	101602753	101668529	A5SS	0.2	50	50	ENSMUST00000163762.8	ENSMUSG00000032841.16	Prr5l	chr2	protein_coding	proline rich 5 like
chr2	101602753	101644616	-	101602753	101668529	A5SS	0.2	50	50	ENSMUST00000163762.8	ENSMUSG00000032841.16	Prr5l	chr2	protein_coding	proline rich 5 like
chr2	101602753	101628289	-	101602753	101627817	5pMXE	0.16	50	50	ENSMUST00000043845.14	ENSMUSG00000032841.16	Prr5l	chr2	protein_coding	proline rich 5 like
chr2	101602753	101644616	-	101602753	101627817	5pMXE	0.16	50	50	ENSMUST00000043845.14	ENSMUSG00000032841.16	Prr5l	chr2	protein_coding	proline rich 5 like
chr2	101602753	101713286	-	101602753	101627817	5pMXE	0.16	50	50	ENSMUST00000043845.14	ENSMUSG00000032841.16	Prr5l	chr2	protein_coding	proline rich 5 like
chr2	101602753	101627766	-	101565090	101627766	A3SS	0.5	50	50	ENSMUST00000141814.2	ENSMUSG00000032841.16	Prr5l	chr2	protein_coding	proline rich 5 like
chr2	101662649	101713286	-	101602753	101713286	A3SS	0.5	50	50	ENSMUST00000154525.2	ENSMUSG00000032841.16	Prr5l	chr2	protein_coding	proline rich 5 like
chr2	101602753	101628289	-	101602753	101713286	A5SS	0.16	50	50	ENSMUST00000154525.2	ENSMUSG00000032841.16	Prr5l	chr2	protein_coding	proline rich 5 like
chr2	101602753	101644616	-	101602753	101713286	A5SS	0.16	50	50	ENSMUST00000154525.2	ENSMUSG00000032841.16	Prr5l	chr2	protein_coding	proline rich 5 like
chr2	101602753	101668529	-	101602753	101713286	A5SS	0.16	50	50	ENSMUST00000154525.2	ENSMUSG00000032841.16	Prr5l	chr2	protein_coding	proline rich 5 like
chr2	101602753	101644616	-	101602753	101628289	5pMXE	0.16	50	50	ENSMUST00000124802.2	ENSMUSG00000032841.16	Prr5l	chr2	protein_coding	proline rich 5 like
chr2	101725605	101727385	+	101725605	101727047	3pMXE	0.5	50	50	ENSMUST00000131287.8	ENSMUSG00000027163.14	Commd9	chr2	protein_coding	COMM domain containing 9
chr2	101900403	101943878	-	101900403	101943974	A5SS	0.5	50	50	ENSMUST00000111222.2	ENSMUSG00000048058.18	Ldlrad3	chr2	protein_coding	low density lipoprotein receptor class A domain containing 3
chr2	101944024	101968239	-	101944024	102016625	A5SS	0.5	50	50	ENSMUST00000111222.2	ENSMUSG00000048058.18	Ldlrad3	chr2	protein_coding	low density lipoprotein receptor class A domain containing 3
chr2	101870051	101872199	+	101870051	101890627	A3SS	0.5	50	50	ENSMUST00000140238.2	ENSMUSG00000085417.2	Gm13919	chr2	lncRNA	predicted gene 13919
chr2	102188001	102230358	-	102188001;102211286	102211209;102230358	ES	0.5	50	50	ENSMUST00000102573.8	ENSMUSG00000027189.17	Trim44	chr2	protein_coding	tripartite motif-containing 44
chr2	102211286	102238141	-	102211286	102230358	5pMXE	0.5	50	50	ENSMUST00000102573.8	ENSMUSG00000027189.17	Trim44	chr2	protein_coding	tripartite motif-containing 44
chr2	102188001	102230358	-	102188001	102211209	A5SS&ES	0.5	50	50	ENSMUST00000144110.2	ENSMUSG00000027189.17	Trim44	chr2	protein_coding	tripartite motif-containing 44
chr2	102380609	102383103	+	102380609	102411078	A3SS	0.5	50	50	ENSMUST00000028612.8	ENSMUSG00000027188.9	Pamr1	chr2	protein_coding	peptidase domain containing associated with muscle regeneration 1
chr2	102591554	102607772	+	102591554;102597412	102597278;102607772	ES	0.5	50	50	ENSMUST00000080210.10	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102489646;102516614	102516466;102566289	+	102489646	102566289	cassetteExon	0.5	100	100	ENSMUST00000080210.10	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102489646;102524465	102524310;102566289	+	102489646	102566289	cassetteExon	0.5	100	100	ENSMUST00000080210.10	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102489646;102532825	102532691;102566289	+	102489646	102566289	cassetteExon	0.5	100	100	ENSMUST00000080210.10	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102608000;102611132	102611062;102611808	+	102608000	102611808	cassetteExon	0.5	100	100	ENSMUST00000080210.10	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102506154	102566289	+	102489646	102566289	A5SS	0.12	50	50	ENSMUST00000080210.10	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102536729	102566289	+	102489646	102566289	A5SS	0.12	50	50	ENSMUST00000080210.10	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102536828	102566289	+	102489646	102566289	A5SS	0.12	50	50	ENSMUST00000080210.10	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102549516	102566289	+	102489646	102566289	A5SS	0.12	50	50	ENSMUST00000080210.10	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102489646;102516614	102516466;102566289	+	102489646;102524465	102524310;102566289	MXE	0.5	100	100	ENSMUST00000125085.8	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102489646;102532825	102532691;102566289	+	102489646;102524465	102524310;102566289	MXE	0.5	100	100	ENSMUST00000125085.8	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102506154	102566289	+	102524465	102566289	A5SS&ES	0.12	50	50	ENSMUST00000125085.8	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102536729	102566289	+	102524465	102566289	A5SS	0.12	50	50	ENSMUST00000125085.8	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102536828	102566289	+	102524465	102566289	A5SS	0.12	50	50	ENSMUST00000125085.8	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102549516	102566289	+	102524465	102566289	A5SS	0.12	50	50	ENSMUST00000125085.8	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102489646;102516614	102516466;102566289	+	102489646;102532825	102532691;102566289	MXE	0.5	100	100	ENSMUST00000145921.2	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102506154	102566289	+	102532825	102566289	A5SS&ES	0.12	50	50	ENSMUST00000145921.2	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102536729	102566289	+	102532825	102566289	A5SS	0.12	50	50	ENSMUST00000145921.2	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102536828	102566289	+	102532825	102566289	A5SS	0.12	50	50	ENSMUST00000145921.2	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102549516	102566289	+	102532825	102566289	A5SS	0.12	50	50	ENSMUST00000145921.2	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102506154	102566289	+	102516614	102566289	A5SS&ES	0.12	50	50	ENSMUST00000136221.8	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102536729	102566289	+	102516614	102566289	A5SS	0.12	50	50	ENSMUST00000136221.8	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102536828	102566289	+	102516614	102566289	A5SS	0.12	50	50	ENSMUST00000136221.8	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102549516	102566289	+	102516614	102566289	A5SS	0.12	50	50	ENSMUST00000136221.8	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102536729	102566289	+	102506154	102566289	A5SS	0.12	50	50	ENSMUST00000137466.2	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102536828	102566289	+	102506154	102566289	A5SS	0.12	50	50	ENSMUST00000137466.2	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102549516	102566289	+	102506154	102566289	A5SS	0.12	50	50	ENSMUST00000137466.2	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102536828	102566289	+	102536729	102566289	A5SS	0.12	50	50	ENSMUST00000123759.8	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102549516	102566289	+	102536729	102566289	A5SS	0.12	50	50	ENSMUST00000123759.8	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102549516	102566289	+	102536828	102566289	A5SS	0.12	50	50	ENSMUST00000005220.11	ENSMUSG00000005089.16	Slc1a2	chr2	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr2	102575267	102576956	-	102568432	102576956	A3SS	0.33	50	50	ENSMUST00000137123.2	ENSMUSG00000087185.2	Gm13872	chr2	lncRNA	predicted gene 13872
chr2	102576381	102576956	-	102568432	102576956	A3SS	0.33	50	50	ENSMUST00000137123.2	ENSMUSG00000087185.2	Gm13872	chr2	lncRNA	predicted gene 13872
chr2	102575267;102576381	102576160;102576956	-	102575267	102576956	cassetteExon	0.5	100	100	ENSMUST00000143995.2	ENSMUSG00000087185.2	Gm13872	chr2	lncRNA	predicted gene 13872
chr2	102664680	102669703	-	102664680;102668283	102668158;102669703	ES	0.5	50	50	ENSMUST00000005218.15	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102669822	102683360	-	102669822;102672722	102672606;102683360	ES	0.12	50	50	ENSMUST00000111194.8	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102672722;102673294	102673181;102683360	-	102672722	102683360	cassetteExon	0.5	100	100	ENSMUST00000111194.8	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102679127	102683360	-	102672722	102683360	A3SS	0.12	50	50	ENSMUST00000111194.8	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102673294	102683360	-	102669822	102683360	A3SS	0.12	50	50	ENSMUST00000060516.14	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102679127	102683360	-	102669822	102683360	A3SS	0.12	50	50	ENSMUST00000060516.14	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102658955;102661881	102661675;102683360	-	102658955	102683360	cassetteExon	0.5	100	100	ENSMUST00000099673.9	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102662917	102683360	-	102658955	102683360	A3SS	0.12	50	50	ENSMUST00000099673.9	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102664680	102683360	-	102658955	102683360	A3SS	0.12	50	50	ENSMUST00000099673.9	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102669822	102683360	-	102658955	102683360	A3SS	0.12	50	50	ENSMUST00000099673.9	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102672722	102683360	-	102658955	102683360	A3SS	0.12	50	50	ENSMUST00000099673.9	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102673294	102683360	-	102658955	102683360	A3SS	0.12	50	50	ENSMUST00000099673.9	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102679127	102683360	-	102658955	102683360	A3SS	0.12	50	50	ENSMUST00000099673.9	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102661881	102683360	-	102661881;102662917	102662828;102683360	ES	0.12	50	50	ENSMUST00000111190.9	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102662917;102664680	102664579;102683360	-	102662917	102683360	cassetteExon	0.5	100	100	ENSMUST00000111190.9	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102669822	102683360	-	102662917	102683360	A3SS	0.12	50	50	ENSMUST00000111190.9	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102672722	102683360	-	102662917	102683360	A3SS	0.12	50	50	ENSMUST00000111190.9	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102673294	102683360	-	102662917	102683360	A3SS	0.12	50	50	ENSMUST00000111190.9	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102679127	102683360	-	102662917	102683360	A3SS	0.12	50	50	ENSMUST00000111190.9	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102664680;102669822	102669703;102683360	-	102664680	102683360	cassetteExon	0.5	100	100	ENSMUST00000111191.9	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102672722	102683360	-	102664680	102683360	A3SS	0.12	50	50	ENSMUST00000111191.9	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102673294	102683360	-	102664680	102683360	A3SS	0.12	50	50	ENSMUST00000111191.9	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102679127	102683360	-	102664680	102683360	A3SS	0.12	50	50	ENSMUST00000111191.9	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102664680	102668158	-	102664680	102683360	A5SS	0.33	50	50	ENSMUST00000111191.9	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102679127	102683360	-	102673294	102683360	A3SS	0.12	50	50	ENSMUST00000111198.9	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102673294	102675630	-	102673294	102683360	A5SS	0.5	50	50	ENSMUST00000111198.9	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102664680	102683360	-	102661881	102683360	A3SS	0.12	50	50	ENSMUST00000111192.3	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102669822	102683360	-	102661881	102683360	A3SS	0.12	50	50	ENSMUST00000111192.3	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102672722	102683360	-	102661881	102683360	A3SS	0.12	50	50	ENSMUST00000111192.3	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102673294	102683360	-	102661881	102683360	A3SS	0.12	50	50	ENSMUST00000111192.3	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102679127	102683360	-	102661881	102683360	A3SS	0.12	50	50	ENSMUST00000111192.3	ENSMUSG00000005087.18	Cd44	chr2	protein_coding	CD44 antigen
chr2	102877166	102903635	-	102877166;102888922	102888842;102903635	ES	0.5	50	50	ENSMUST00000011058.9	ENSMUSG00000010914.11	Pdhx	chr2	protein_coding	pyruvate dehydrogenase complex, component X
chr2	102913400	102918906	+	102913400;102917506	102917458;102918906	ES	0.5	50	50	ENSMUST00000011055.7	ENSMUSG00000010911.13	Apip	chr2	protein_coding	APAF1 interacting protein
chr2	102922261	102922787	+	102922261	102922810	A3SS	0.5	50	50	ENSMUST00000011055.7	ENSMUSG00000010911.13	Apip	chr2	protein_coding	APAF1 interacting protein
chr2	102919081	102919748	+	102919023	102919748	A5SS	0.5	50	50	ENSMUST00000011055.7	ENSMUSG00000010911.13	Apip	chr2	protein_coding	APAF1 interacting protein
chr2	103012802	103016316	+	103012802	103012930	3pMXE	0.5	50	50	ENSMUST00000130680.2	ENSMUSG00000087032.2	Gm13874	chr2	lncRNA	predicted gene 13874
chr2	103098565	103104399	-	103098565;103104298	103104230;103104399	ES	0.5	50	50	ENSMUST00000090475.10	ENSMUSG00000012350.16	Ehf	chr2	protein_coding	ets homologous factor
chr2	103113965	103121056	-	103113965	103133400	A5SS	0.25	50	50	ENSMUST00000090475.10	ENSMUSG00000012350.16	Ehf	chr2	protein_coding	ets homologous factor
chr2	103113965	103129860	-	103113965	103133400	A5SS	0.25	50	50	ENSMUST00000090475.10	ENSMUSG00000012350.16	Ehf	chr2	protein_coding	ets homologous factor
chr2	103113965	103133120	-	103113965	103133400	A5SS	0.25	50	50	ENSMUST00000090475.10	ENSMUSG00000012350.16	Ehf	chr2	protein_coding	ets homologous factor
chr2	103113965	103133120	-	103113965	103129860	5pMXE	0.25	50	50	ENSMUST00000125788.8	ENSMUSG00000012350.16	Ehf	chr2	protein_coding	ets homologous factor
chr2	103113965	103121056	-	103113965	103129860	A5SS	0.25	50	50	ENSMUST00000125788.8	ENSMUSG00000012350.16	Ehf	chr2	protein_coding	ets homologous factor
chr2	103113965	103133120	-	103113965	103121056	5pMXE	0.25	50	50	ENSMUST00000140503.8	ENSMUSG00000012350.16	Ehf	chr2	protein_coding	ets homologous factor
chr2	103214861	103218423	-	103208358	103218423	A3SS	0.5	50	50	ENSMUST00000144657.8	ENSMUSG00000070794.12	BC016548	chr2	lncRNA	cDNA sequence BC016548
chr2	103254533	103260634	+	103242472	103260634	A5SS	0.33	50	50	ENSMUST00000239273.2	ENSMUSG00000027186.16	Elf5	chr2	protein_coding	E74-like factor 5
chr2	103255230	103260634	+	103242472	103260634	A5SS	0.33	50	50	ENSMUST00000239273.2	ENSMUSG00000027186.16	Elf5	chr2	protein_coding	E74-like factor 5
chr2	103255230	103260634	+	103254533	103260634	A5SS	0.33	50	50	ENSMUST00000028609.14	ENSMUSG00000027186.16	Elf5	chr2	protein_coding	E74-like factor 5
chr2	103587605	103591394	-	103587605;103588138	103588016;103591394	ES	0.5	50	50	ENSMUST00000028608.13	ENSMUSG00000027185.16	Nat10	chr2	protein_coding	N-acetyltransferase 10
chr2	103564870	103565263	-	103564870	103565211	A5SS	0.5	50	50	ENSMUST00000028608.13	ENSMUSG00000027185.16	Nat10	chr2	protein_coding	N-acetyltransferase 10
chr2	103588138	103591140	-	103588138	103591394	A5SS	0.5	50	50	ENSMUST00000028608.13	ENSMUSG00000027185.16	Nat10	chr2	protein_coding	N-acetyltransferase 10
chr2	103587605	103591394	-	103587605	103588016	5pMXE	0.5	50	50	ENSMUST00000148798.2	ENSMUSG00000027185.16	Nat10	chr2	protein_coding	N-acetyltransferase 10
chr2	103599248	103602042	-	103599248;103599974	103599780;103602042	ES	0.5	50	50	ENSMUST00000028607.13	ENSMUSG00000027184.15	Caprin1	chr2	protein_coding	cell cycle associated protein 1
chr2	103613550;103618548	103618483;103627076	-	103613550	103627076	cassetteExon	0.5	100	100	ENSMUST00000028607.13	ENSMUSG00000027184.15	Caprin1	chr2	protein_coding	cell cycle associated protein 1
chr2	103604089	103605762	-	103604140	103605762	A3SS	0.5	50	50	ENSMUST00000028607.13	ENSMUSG00000027184.15	Caprin1	chr2	protein_coding	cell cycle associated protein 1
chr2	103613550	103626533	-	103613550	103627076	A5SS	0.33	50	50	ENSMUST00000028607.13	ENSMUSG00000027184.15	Caprin1	chr2	protein_coding	cell cycle associated protein 1
chr2	103613550	103626533	-	103613550	103618483	A5SS&ES	0.33	50	50	ENSMUST00000141750.8	ENSMUSG00000027184.15	Caprin1	chr2	protein_coding	cell cycle associated protein 1
chr2	103801057	103811220	+	103801057;103806565	103806350;103811220	ES	0.5	50	50	ENSMUST00000156813.8	ENSMUSG00000032698.16	Lmo2	chr2	protein_coding	LIM domain only 2
chr2	103800066	103800838	+	103788428	103800838	A5SS	0.25	50	50	ENSMUST00000156813.8	ENSMUSG00000032698.16	Lmo2	chr2	protein_coding	LIM domain only 2
chr2	103800605	103800838	+	103788428	103800838	A5SS	0.25	50	50	ENSMUST00000156813.8	ENSMUSG00000032698.16	Lmo2	chr2	protein_coding	LIM domain only 2
chr2	103800710	103800838	+	103788428	103800838	A5SS	0.25	50	50	ENSMUST00000156813.8	ENSMUSG00000032698.16	Lmo2	chr2	protein_coding	LIM domain only 2
chr2	103801593	103806350	+	103801057	103806350	A5SS	0.5	50	50	ENSMUST00000156813.8	ENSMUSG00000032698.16	Lmo2	chr2	protein_coding	LIM domain only 2
chr2	103800605	103800838	+	103800066	103800838	A5SS	0.25	50	50	ENSMUST00000123437.8	ENSMUSG00000032698.16	Lmo2	chr2	protein_coding	LIM domain only 2
chr2	103800710	103800838	+	103800066	103800838	A5SS	0.25	50	50	ENSMUST00000123437.8	ENSMUSG00000032698.16	Lmo2	chr2	protein_coding	LIM domain only 2
chr2	103800605	103800838	+	103800710	103800838	A5SS	0.25	50	50	ENSMUST00000111143.8	ENSMUSG00000032698.16	Lmo2	chr2	protein_coding	LIM domain only 2
chr2	103801057	103811220	+	103801057	103806350	3pMXE	0.5	50	50	ENSMUST00000138815.2	ENSMUSG00000032698.16	Lmo2	chr2	protein_coding	LIM domain only 2
chr2	103856557	103857567	-	103856557	103858122	A5SS	0.33	50	50	ENSMUST00000123966.3	ENSMUSG00000046085.8	4931422A03Rik	chr2	protein_coding	RIKEN cDNA 4931422A03 gene
chr2	103856557	103858123	-	103856557	103858122	A5SS	0.33	50	50	ENSMUST00000123966.3	ENSMUSG00000046085.8	4931422A03Rik	chr2	protein_coding	RIKEN cDNA 4931422A03 gene
chr2	103856557	103858123	-	103856557;103857632	103857567;103858123	ES	0.5	50	50	ENSMUST00000056170.4	ENSMUSG00000046085.8	4931422A03Rik	chr2	protein_coding	RIKEN cDNA 4931422A03 gene
chr2	103881601	103885181	+	103881601;103883825	103883710;103885181	ES	0.5	50	50	ENSMUST00000028603.10	ENSMUSG00000027180.13	Fbxo3	chr2	protein_coding	F-box protein 3
chr2	103858311	103860704	+	103858311	103860689	A3SS	0.5	50	50	ENSMUST00000028603.10	ENSMUSG00000027180.13	Fbxo3	chr2	protein_coding	F-box protein 3
chr2	103885371	103886346	+	103885371	103890227	A3SS	0.5	50	50	ENSMUST00000028603.10	ENSMUSG00000027180.13	Fbxo3	chr2	protein_coding	F-box protein 3
chr2	103885204	103890227	+	103885371	103890227	A5SS	0.5	50	50	ENSMUST00000028603.10	ENSMUSG00000027180.13	Fbxo3	chr2	protein_coding	F-box protein 3
chr2	103911443	103921349	+	103911443;103920619	103920474;103921349	ES	0.5	50	50	ENSMUST00000111131.9	ENSMUSG00000068686.13	Cd59b	chr2	protein_coding	CD59b antigen
chr2	103911443	103914767	+	103911443	103920474	A3SS	0.33	50	50	ENSMUST00000111131.9	ENSMUSG00000068686.13	Cd59b	chr2	protein_coding	CD59b antigen
chr2	103901433	103909203	+	103900264	103909203	A5SS	0.33	50	50	ENSMUST00000111131.9	ENSMUSG00000068686.13	Cd59b	chr2	protein_coding	CD59b antigen
chr2	103901615	103909203	+	103900264	103909203	A5SS	0.33	50	50	ENSMUST00000111131.9	ENSMUSG00000068686.13	Cd59b	chr2	protein_coding	CD59b antigen
chr2	103911443	103914767	+	103911443	103921349	A3SS	0.33	50	50	ENSMUST00000111132.8	ENSMUSG00000068686.13	Cd59b	chr2	protein_coding	CD59b antigen
chr2	103901433;103901615	103901513;103909203	+	103901433	103909203	cassetteExon	0.5	100	100	ENSMUST00000090429.8	ENSMUSG00000068686.13	Cd59b	chr2	protein_coding	CD59b antigen
chr2	103926272	103934516	+	103926272;103928189	103928070;103934516	ES	0.5	50	50	ENSMUST00000168176.8	ENSMUSG00000032679.13	Cd59a	chr2	protein_coding	CD59a antigen
chr2	104038554	104051480	-	104038554;104044620	104044436;104051480	ES	0.5	50	50	ENSMUST00000136156.9	ENSMUSG00000068373.16	D430041D05Rik	chr2	protein_coding	RIKEN cDNA D430041D05 gene
chr2	104085915	104240274	-	104085915;104088853	104088509;104240274	ES	0.33	50	50	ENSMUST00000136156.9	ENSMUSG00000068373.16	D430041D05Rik	chr2	protein_coding	RIKEN cDNA D430041D05 gene
chr2	104016248	104022780	-	103998533	104022780	A3SS	0.5	50	50	ENSMUST00000136156.9	ENSMUSG00000068373.16	D430041D05Rik	chr2	protein_coding	RIKEN cDNA D430041D05 gene
chr2	104038551	104044436	-	104038554	104044436	A3SS	0.5	50	50	ENSMUST00000136156.9	ENSMUSG00000068373.16	D430041D05Rik	chr2	protein_coding	RIKEN cDNA D430041D05 gene
chr2	104088896	104240274	-	104088853	104240274	A3SS	0.33	50	50	ENSMUST00000136156.9	ENSMUSG00000068373.16	D430041D05Rik	chr2	protein_coding	RIKEN cDNA D430041D05 gene
chr2	104085915	104086343	-	104085915	104088509	A5SS	0.33	50	50	ENSMUST00000136156.9	ENSMUSG00000068373.16	D430041D05Rik	chr2	protein_coding	RIKEN cDNA D430041D05 gene
chr2	104085915;104088896	104088509;104240274	-	104085915	104240274	cassetteExon	0.5	100	100	ENSMUST00000141159.9	ENSMUSG00000068373.16	D430041D05Rik	chr2	protein_coding	RIKEN cDNA D430041D05 gene
chr2	104085915	104086343	-	104085915	104240274	A5SS	0.33	50	50	ENSMUST00000141159.9	ENSMUSG00000068373.16	D430041D05Rik	chr2	protein_coding	RIKEN cDNA D430041D05 gene
chr2	104038554	104051480	-	104044620	104051480	A3SS&ES	0.5	50	50	ENSMUST00000089726.10	ENSMUSG00000068373.16	D430041D05Rik	chr2	protein_coding	RIKEN cDNA D430041D05 gene
chr2	104085915	104240274	-	104085915;104088896	104086343;104240274	ES	0.33	50	50	ENSMUST00000230671.2	ENSMUSG00000068373.16	D430041D05Rik	chr2	protein_coding	RIKEN cDNA D430041D05 gene
chr2	104085879	104086343	-	104085915	104086343	A3SS	0.5	50	50	ENSMUST00000230671.2	ENSMUSG00000068373.16	D430041D05Rik	chr2	protein_coding	RIKEN cDNA D430041D05 gene
chr2	104089021	104105441	+	104089021	104090464	3pMXE	0.5	50	50	ENSMUST00000151310.8	ENSMUSG00000087473.8	Gm13883	chr2	lncRNA	predicted gene 13883
chr2	104264190;104264534	104264472;104264683	-	104264190	104264683	cassetteExon	0.5	100	100	ENSMUST00000028600.14	ENSMUSG00000027177.15	Hipk3	chr2	protein_coding	homeodomain interacting protein kinase 3
chr2	104267414	104268196	-	104267465	104268196	A3SS	0.5	50	50	ENSMUST00000028600.14	ENSMUSG00000027177.15	Hipk3	chr2	protein_coding	homeodomain interacting protein kinase 3
chr2	104302192	104323566	-	104302192	104324293	A5SS	0.5	50	50	ENSMUST00000028600.14	ENSMUSG00000027177.15	Hipk3	chr2	protein_coding	homeodomain interacting protein kinase 3
chr2	104389551	104390069	+	104389829	104390069	A5SS	0.33	50	50	ENSMUST00000146553.8	ENSMUSG00000086454.8	Platr14	chr2	lncRNA	pluripotency associated transcript 14
chr2	104389755	104390069	+	104389829	104390069	A5SS	0.33	50	50	ENSMUST00000146553.8	ENSMUSG00000086454.8	Platr14	chr2	lncRNA	pluripotency associated transcript 14
chr2	104397621	104398206	+	104390320	104398206	A5SS	0.5	50	50	ENSMUST00000146553.8	ENSMUSG00000086454.8	Platr14	chr2	lncRNA	pluripotency associated transcript 14
chr2	104389551	104390069	+	104389755	104390069	A5SS	0.33	50	50	ENSMUST00000136364.8	ENSMUSG00000086454.8	Platr14	chr2	lncRNA	pluripotency associated transcript 14
chr2	104398277	104398996	+	104398277	104401540	A3SS	0.5	50	50	ENSMUST00000125854.8	ENSMUSG00000086454.8	Platr14	chr2	lncRNA	pluripotency associated transcript 14
chr2	104491059	104493676	+	104491059	104493639	A3SS	0.5	50	50	ENSMUST00000028599.8	ENSMUSG00000027176.9	Cstf3	chr2	protein_coding	cleavage stimulation factor, 3' pre-RNA, subunit 3
chr2	104512303	104514439	-	104487883	104514439	A3SS	0.5	50	50	ENSMUST00000129571.2	ENSMUSG00000027175.11	Tcp11l1	chr2	protein_coding	t-complex 11 like 1
chr2	104530319	104542321	-	104530319;104536887	104536701;104542321	ES	0.33	50	50	ENSMUST00000111118.8	ENSMUSG00000027175.11	Tcp11l1	chr2	protein_coding	t-complex 11 like 1
chr2	104530319;104532248	104532124;104536701	-	104530319	104536701	cassetteExon	0.5	100	100	ENSMUST00000111118.8	ENSMUSG00000027175.11	Tcp11l1	chr2	protein_coding	t-complex 11 like 1
chr2	104525009	104527855	-	104520975	104527855	A3SS	0.5	50	50	ENSMUST00000111118.8	ENSMUSG00000027175.11	Tcp11l1	chr2	protein_coding	t-complex 11 like 1
chr2	104529472	104530187	-	104529000	104530187	A3SS	0.5	50	50	ENSMUST00000111118.8	ENSMUSG00000027175.11	Tcp11l1	chr2	protein_coding	t-complex 11 like 1
chr2	104535546	104536701	-	104530319	104536701	A3SS	0.33	50	50	ENSMUST00000111118.8	ENSMUSG00000027175.11	Tcp11l1	chr2	protein_coding	t-complex 11 like 1
chr2	104536882	104542321	-	104536887	104542321	A3SS	0.33	50	50	ENSMUST00000111118.8	ENSMUSG00000027175.11	Tcp11l1	chr2	protein_coding	t-complex 11 like 1
chr2	104530319	104542321	-	104530319;104536882	104536701;104542321	ES	0.33	50	50	ENSMUST00000028597.4	ENSMUSG00000027175.11	Tcp11l1	chr2	protein_coding	t-complex 11 like 1
chr2	104530319	104532124	-	104530319	104542321	A5SS	0.33	50	50	ENSMUST00000129792.8	ENSMUSG00000027175.11	Tcp11l1	chr2	protein_coding	t-complex 11 like 1
chr2	104530319	104542321	-	104530319	104536701	5pMXE	0.33	50	50	ENSMUST00000137428.8	ENSMUSG00000027175.11	Tcp11l1	chr2	protein_coding	t-complex 11 like 1
chr2	104535546	104536701	-	104532248	104536701	A3SS	0.33	50	50	ENSMUST00000126310.8	ENSMUSG00000027175.11	Tcp11l1	chr2	protein_coding	t-complex 11 like 1
chr2	104620542;104625002	104624849;104625533	-	104620542	104625533	cassetteExon	0.5	100	100	ENSMUST00000117237.2	ENSMUSG00000074994.7	Qser1	chr2	protein_coding	glutamine and serine rich 1
chr2	104716838	104737886	+	104698238	104737886	A5SS	0.5	50	50	ENSMUST00000127840.8	ENSMUSG00000045106.13	Ccdc73	chr2	protein_coding	coiled-coil domain containing 73
chr2	104824947	104848015	+	104824947	104829308	3pMXE	0.5	50	50	ENSMUST00000111114.8	ENSMUSG00000045106.13	Ccdc73	chr2	protein_coding	coiled-coil domain containing 73
chr2	104804262	104805931	+	104804262	104805901	A3SS	0.5	50	50	ENSMUST00000111114.8	ENSMUSG00000045106.13	Ccdc73	chr2	protein_coding	coiled-coil domain containing 73
chr2	104847548	104848015	+	104824947	104848015	A5SS	0.5	50	50	ENSMUST00000144358.2	ENSMUSG00000045106.13	Ccdc73	chr2	protein_coding	coiled-coil domain containing 73
chr2	104830647	104835270	-	104830647;104831759	104831616;104835270	ES	0.5	50	50	ENSMUST00000131266.2	ENSMUSG00000027170.13	Eif3m	chr2	protein_coding	eukaryotic translation initiation factor 3, subunit M
chr2	104845247	104847291	-	104843290	104847291	A3SS	0.5	50	50	ENSMUST00000111110.3	ENSMUSG00000027170.13	Eif3m	chr2	protein_coding	eukaryotic translation initiation factor 3, subunit M
chr2	104843290	104843543	-	104843290	104847291	A5SS	0.5	50	50	ENSMUST00000111110.3	ENSMUSG00000027170.13	Eif3m	chr2	protein_coding	eukaryotic translation initiation factor 3, subunit M
chr2	104924582	104930548	-	104919854	104930548	A3SS	0.5	50	50	ENSMUST00000172701.8	ENSMUSG00000074987.10	Wt1os	chr2	lncRNA	Wilms tumor 1 homolog, opposite strand
chr2	104973507	104993670	+	104973507;104974537	104974487;104993670	ES	0.33	50	50	ENSMUST00000143043.8	ENSMUSG00000016458.16	Wt1	chr2	protein_coding	Wilms tumor 1 homolog
chr2	104961497	104963283	+	104957787	104963283	A5SS	0.5	50	50	ENSMUST00000143043.8	ENSMUSG00000016458.16	Wt1	chr2	protein_coding	Wilms tumor 1 homolog
chr2	105000354	105002568	+	105000363	105002568	A5SS	0.5	50	50	ENSMUST00000143043.8	ENSMUSG00000016458.16	Wt1	chr2	protein_coding	Wilms tumor 1 homolog
chr2	104963849;104973507	104973430;104993670	+	104963849	104993670	cassetteExon	0.5	100	100	ENSMUST00000146842.8	ENSMUSG00000016458.16	Wt1	chr2	protein_coding	Wilms tumor 1 homolog
chr2	104974537	104993670	+	104963849	104993670	A5SS	0.33	50	50	ENSMUST00000146842.8	ENSMUSG00000016458.16	Wt1	chr2	protein_coding	Wilms tumor 1 homolog
chr2	105054725	105128071	+	105054725;105115030	105114946;105128071	ES	0.5	50	50	ENSMUST00000068813.3	ENSMUSG00000055312.3	Them7	chr2	protein_coding	thioesterase superfamily member 7
chr2	105367584	105428641	-	105367584;105415277	105415168;105428641	ES	0.5	50	50	ENSMUST00000149133.8	ENSMUSG00000086029.8	Pax6os1	chr2	lncRNA	paired box 6 opposite strand 1
chr2	105428739;105454217	105454063;105500581	-	105428739	105500581	cassetteExon	0.5	100	100	ENSMUST00000149133.8	ENSMUSG00000086029.8	Pax6os1	chr2	lncRNA	paired box 6 opposite strand 1
chr2	105514303	105515232	+	105514303;105515137	105515096;105515232	ES	0.33	50	50	ENSMUST00000111086.11	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105523197	105526615	+	105523197;105525801	105525651;105526615	ES	0.5	50	50	ENSMUST00000111086.11	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105499394;105506317	105506089;105510155	+	105499394	105510155	cassetteExon	0.5	100	100	ENSMUST00000111086.11	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105515447;105515600	105515538;105516123	+	105515447	105516123	cassetteExon	0.5	100	100	ENSMUST00000111086.11	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105515447;105515774	105515538;105516123	+	105515447	105516123	cassetteExon	0.5	100	100	ENSMUST00000111086.11	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105515447;105515893	105515538;105516123	+	105515447	105516123	cassetteExon	0.5	100	100	ENSMUST00000111086.11	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105505008	105510155	+	105499394	105510155	A5SS	0.2	50	50	ENSMUST00000111086.11	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105507183	105510155	+	105499394	105510155	A5SS	0.2	50	50	ENSMUST00000111086.11	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105509822	105510155	+	105499394	105510155	A5SS	0.2	50	50	ENSMUST00000111086.11	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105512978	105514173	+	105510652	105514173	A5SS	0.33	50	50	ENSMUST00000111086.11	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105513116	105514173	+	105510652	105514173	A5SS	0.33	50	50	ENSMUST00000111086.11	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105515339	105516123	+	105515447	105516123	A5SS	0.2	50	50	ENSMUST00000111086.11	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105510652	105515232	+	105510652;105514303	105514173;105515232	ES	0.33	50	50	ENSMUST00000111087.10	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105499394;105510652	105510155;105521910	+	105499394	105521910	cassetteExon	0.5	100	100	ENSMUST00000123063.8	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105499394	105506089	+	105499394	105521910	A3SS	0.33	50	50	ENSMUST00000123063.8	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105516288	105521910	+	105499394	105521910	A5SS	0.33	50	50	ENSMUST00000123063.8	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105510652	105515232	+	105510652	105514173	3pMXE	0.33	50	50	ENSMUST00000142772.8	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105510652	105521910	+	105510652	105514173	3pMXE	0.33	50	50	ENSMUST00000142772.8	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105505008	105506089	+	105499394	105506089	A5SS	0.25	50	50	ENSMUST00000142772.8	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105505008	105510155	+	105506317	105510155	A5SS&ES	0.2	50	50	ENSMUST00000142772.8	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105505896	105506089	+	105499394	105506089	A5SS	0.25	50	50	ENSMUST00000142772.8	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105505994	105506089	+	105499394	105506089	A5SS	0.25	50	50	ENSMUST00000142772.8	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105507183	105510155	+	105506317	105510155	A5SS	0.2	50	50	ENSMUST00000142772.8	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105509822	105510155	+	105506317	105510155	A5SS	0.2	50	50	ENSMUST00000142772.8	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105505008;105506317	105506089;105510155	+	105505008	105510155	cassetteExon	0.5	100	100	ENSMUST00000111088.9	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105510652	105515232	+	105510652	105521910	A3SS	0.33	50	50	ENSMUST00000111088.9	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105507183	105510155	+	105505008	105510155	A5SS	0.2	50	50	ENSMUST00000111088.9	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105509822	105510155	+	105505008	105510155	A5SS	0.2	50	50	ENSMUST00000111088.9	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105516288	105521910	+	105510652	105521910	A5SS	0.5	50	50	ENSMUST00000111088.9	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105505008	105510155	+	105505008	105506089	3pMXE	0.5	50	50	ENSMUST00000147923.3	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105505896	105506089	+	105505008	105506089	A5SS	0.25	50	50	ENSMUST00000147923.3	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105505994	105506089	+	105505008	105506089	A5SS	0.25	50	50	ENSMUST00000147923.3	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105505896	105506089	+	105505994	105506089	A5SS	0.5	50	50	ENSMUST00000172990.8	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105499394	105510155	+	105506317	105510155	5pMXE	0.2	50	50	ENSMUST00000090397.13	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105509822	105510155	+	105507183	105510155	A5SS	0.2	50	50	ENSMUST00000090391.13	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105515137	105515232	+	105510652	105515232	A5SS	0.33	50	50	ENSMUST00000153011.8	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105510652	105515232	+	105514303	105515232	5pMXE	0.33	50	50	ENSMUST00000154302.3	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105513116	105514173	+	105512978	105514173	A5SS	0.33	50	50	ENSMUST00000140173.8	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105515339	105516123	+	105515774	105516123	A5SS	0.2	50	50	ENSMUST00000154643.8	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105515447	105516123	+	105515774	105516123	A5SS	0.2	50	50	ENSMUST00000154643.8	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105515600	105516123	+	105515774	105516123	A5SS	0.2	50	50	ENSMUST00000154643.8	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105515893	105516123	+	105515774	105516123	A5SS	0.2	50	50	ENSMUST00000154643.8	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105515339	105516123	+	105515600	105516123	A5SS&ES	0.2	50	50	ENSMUST00000138365.8	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105515893	105516123	+	105515600	105516123	A5SS	0.2	50	50	ENSMUST00000138365.8	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105515893	105516123	+	105515339	105516123	A5SS	0.2	50	50	ENSMUST00000145744.8	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105514303	105515232	+	105515137	105515232	A5SS	0.33	50	50	ENSMUST00000123000.3	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105515447	105516123	+	105515893	105516123	5pMXE	0.2	50	50	ENSMUST00000146803.4	ENSMUSG00000027168.22	Pax6	chr2	protein_coding	paired box 6
chr2	105727282;105733725	105733646;105734614	-	105727282	105734614	cassetteExon	0.5	100	100	ENSMUST00000122965.8	ENSMUSG00000027167.12	Elp4	chr2	protein_coding	elongator acetyltransferase complex subunit 4
chr2	105561845	105622561	-	105533206	105622561	A3SS	0.5	50	50	ENSMUST00000122965.8	ENSMUSG00000027167.12	Elp4	chr2	protein_coding	elongator acetyltransferase complex subunit 4
chr2	105797439	105832274	-	105797439;105811465	105811327;105832274	ES	0.33	50	50	ENSMUST00000155811.2	ENSMUSG00000027166.15	Dnajc24	chr2	protein_coding	DnaJ heat shock protein family (Hsp40) member C24
chr2	105797439;105800861	105800793;105811327	-	105797439	105811327	cassetteExon	0.5	100	100	ENSMUST00000155811.2	ENSMUSG00000027166.15	Dnajc24	chr2	protein_coding	DnaJ heat shock protein family (Hsp40) member C24
chr2	105797439;105800861	105800793;105832274	-	105797439;105811465	105811327;105832274	MXE	0.5	100	100	ENSMUST00000155811.2	ENSMUSG00000027166.15	Dnajc24	chr2	protein_coding	DnaJ heat shock protein family (Hsp40) member C24
chr2	105804427	105811327	-	105797439	105811327	A3SS	0.33	50	50	ENSMUST00000155811.2	ENSMUSG00000027166.15	Dnajc24	chr2	protein_coding	DnaJ heat shock protein family (Hsp40) member C24
chr2	105800861	105832274	-	105800861;105811465	105811327;105832274	ES	0.33	50	50	ENSMUST00000102555.11	ENSMUSG00000027166.15	Dnajc24	chr2	protein_coding	DnaJ heat shock protein family (Hsp40) member C24
chr2	105800861;105804427	105804267;105811327	-	105800861	105811327	cassetteExon	0.5	100	100	ENSMUST00000102555.11	ENSMUSG00000027166.15	Dnajc24	chr2	protein_coding	DnaJ heat shock protein family (Hsp40) member C24
chr2	105797439	105832274	-	105797439;105800861	105800793;105832274	ES	0.33	50	50	ENSMUST00000124163.8	ENSMUSG00000027166.15	Dnajc24	chr2	protein_coding	DnaJ heat shock protein family (Hsp40) member C24
chr2	105800861	105804267	-	105800861	105832274	A5SS	0.33	50	50	ENSMUST00000124163.8	ENSMUSG00000027166.15	Dnajc24	chr2	protein_coding	DnaJ heat shock protein family (Hsp40) member C24
chr2	105870914;105883873	105883675;105893264	+	105870914;105877200	105872394;105893264	MXE	0.5	100	100	ENSMUST00000126340.3	ENSMUSG00000074981.14	Dcdc5	chr2	transcribed_unitary_pseudogene	doublecortin domain containing 5
chr2	105893342	105911418	+	105893342	105907098	A3SS&ES	0.5	50	50	ENSMUST00000126340.3	ENSMUSG00000074981.14	Dcdc5	chr2	transcribed_unitary_pseudogene	doublecortin domain containing 5
chr2	105870283	105870749	+	105848797	105870749	A5SS	0.5	50	50	ENSMUST00000126340.3	ENSMUSG00000074981.14	Dcdc5	chr2	transcribed_unitary_pseudogene	doublecortin domain containing 5
chr2	106060634	106166308	+	106060634;106159252	106159101;106166308	ES	0.5	50	50	ENSMUST00000122388.10	ENSMUSG00000074981.14	Dcdc5	chr2	transcribed_unitary_pseudogene	doublecortin domain containing 5
chr2	105870914	105872394	+	105870914	105883675	A3SS	0.5	50	50	ENSMUST00000122388.10	ENSMUSG00000074981.14	Dcdc5	chr2	transcribed_unitary_pseudogene	doublecortin domain containing 5
chr2	105877200	105893264	+	105883873	105893264	A5SS&ES	0.5	50	50	ENSMUST00000122388.10	ENSMUSG00000074981.14	Dcdc5	chr2	transcribed_unitary_pseudogene	doublecortin domain containing 5
chr2	106056935	106059763	+	106052451	106059763	A5SS	0.5	50	50	ENSMUST00000122388.10	ENSMUSG00000074981.14	Dcdc5	chr2	transcribed_unitary_pseudogene	doublecortin domain containing 5
chr2	106473495	106474046	-	106473495	106473657	5pMXE	0.5	50	50	ENSMUST00000135180.2	ENSMUSG00000085218.8	BB218582	chr2	lncRNA	expressed sequence BB218582
chr2	106477871	106478220	-	106477807	106478220	A3SS	0.5	50	50	ENSMUST00000123623.8	ENSMUSG00000085218.8	BB218582	chr2	lncRNA	expressed sequence BB218582
chr2	106575226;106605015	106604920;106613978	+	106575226	106613978	cassetteExon	0.5	100	100	ENSMUST00000111063.8	ENSMUSG00000016386.16	Mpped2	chr2	protein_coding	metallophosphoesterase domain containing 2
chr2	106525599	106529633	+	106524166	106529633	A5SS	0.25	50	50	ENSMUST00000111063.8	ENSMUSG00000016386.16	Mpped2	chr2	protein_coding	metallophosphoesterase domain containing 2
chr2	106526021	106529633	+	106524166	106529633	A5SS	0.25	50	50	ENSMUST00000111063.8	ENSMUSG00000016386.16	Mpped2	chr2	protein_coding	metallophosphoesterase domain containing 2
chr2	106526282	106529633	+	106524166	106529633	A5SS	0.25	50	50	ENSMUST00000111063.8	ENSMUSG00000016386.16	Mpped2	chr2	protein_coding	metallophosphoesterase domain containing 2
chr2	106561001	106575045	+	106529880	106575045	A5SS	0.5	50	50	ENSMUST00000111063.8	ENSMUSG00000016386.16	Mpped2	chr2	protein_coding	metallophosphoesterase domain containing 2
chr2	106526021	106529633	+	106525599	106529633	A5SS	0.25	50	50	ENSMUST00000144155.8	ENSMUSG00000016386.16	Mpped2	chr2	protein_coding	metallophosphoesterase domain containing 2
chr2	106526282	106529633	+	106525599	106529633	A5SS	0.25	50	50	ENSMUST00000144155.8	ENSMUSG00000016386.16	Mpped2	chr2	protein_coding	metallophosphoesterase domain containing 2
chr2	106526282	106529633	+	106526021	106529633	A5SS	0.25	50	50	ENSMUST00000016530.14	ENSMUSG00000016386.16	Mpped2	chr2	protein_coding	metallophosphoesterase domain containing 2
chr2	106799903	106800656	-	106799903	106804617	A5SS	0.5	50	50	ENSMUST00000028536.13	ENSMUSG00000027122.16	Arl14ep	chr2	protein_coding	ADP-ribosylation factor-like 14 effector protein
chr2	107121780	107124489	+	107121416	107124489	A5SS	0.5	50	50	ENSMUST00000037012.3	ENSMUSG00000042604.6	Kcna4	chr2	protein_coding	potassium voltage-gated channel, shaker-related subfamily, member 4
chr2	109105020	109110954	-	109105020	109108538	5pMXE	0.33	50	50	ENSMUST00000081631.10	ENSMUSG00000057234.10	Mettl15	chr2	protein_coding	methyltransferase like 15
chr2	109105020	109110981	-	109105020	109108538	5pMXE	0.33	50	50	ENSMUST00000081631.10	ENSMUSG00000057234.10	Mettl15	chr2	protein_coding	methyltransferase like 15
chr2	109022033;109070761	109070625;109104734	-	109022033	109104734	cassetteExon	0.5	100	100	ENSMUST00000081631.10	ENSMUSG00000057234.10	Mettl15	chr2	protein_coding	methyltransferase like 15
chr2	109105020	109110981	-	109105020	109110954	A5SS	0.33	50	50	ENSMUST00000147770.2	ENSMUSG00000057234.10	Mettl15	chr2	protein_coding	methyltransferase like 15
chr2	109022033	109104734	-	109070761	109104734	3pMXE	0.5	50	50	ENSMUST00000138533.8	ENSMUSG00000057234.10	Mettl15	chr2	protein_coding	methyltransferase like 15
chr2	109506445	109553727	+	109505684	109553727	A5SS	0.1	50	50	ENSMUST00000053317.12	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109506657	109553727	+	109505684	109553727	A5SS	0.1	50	50	ENSMUST00000053317.12	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109506740	109553727	+	109505684	109553727	A5SS	0.1	50	50	ENSMUST00000053317.12	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109507569	109553727	+	109505684	109553727	A5SS	0.1	50	50	ENSMUST00000053317.12	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109523119	109553727	+	109505684	109553727	A5SS	0.1	50	50	ENSMUST00000053317.12	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109523452	109553727	+	109505684	109553727	A5SS	0.1	50	50	ENSMUST00000053317.12	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109524254	109553727	+	109505684	109553727	A5SS	0.1	50	50	ENSMUST00000053317.12	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109524966	109553727	+	109505684	109553727	A5SS	0.1	50	50	ENSMUST00000053317.12	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109540006	109553727	+	109505684	109553727	A5SS	0.1	50	50	ENSMUST00000053317.12	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109506445	109553727	+	109506740	109553727	A5SS	0.1	50	50	ENSMUST00000111051.10	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109506657	109553727	+	109506740	109553727	A5SS	0.1	50	50	ENSMUST00000111051.10	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109507569	109553727	+	109506740	109553727	A5SS	0.1	50	50	ENSMUST00000111051.10	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109523119	109553727	+	109506740	109553727	A5SS	0.1	50	50	ENSMUST00000111051.10	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109523452	109553727	+	109506740	109553727	A5SS	0.1	50	50	ENSMUST00000111051.10	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109524254	109553727	+	109506740	109553727	A5SS	0.1	50	50	ENSMUST00000111051.10	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109524966	109553727	+	109506740	109553727	A5SS	0.1	50	50	ENSMUST00000111051.10	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109540006	109553727	+	109506740	109553727	A5SS	0.1	50	50	ENSMUST00000111051.10	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109506445	109553727	+	109506657	109553727	A5SS	0.1	50	50	ENSMUST00000111047.9	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109507569	109553727	+	109506657	109553727	A5SS	0.1	50	50	ENSMUST00000111047.9	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109523119	109553727	+	109506657	109553727	A5SS	0.1	50	50	ENSMUST00000111047.9	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109523452	109553727	+	109506657	109553727	A5SS	0.1	50	50	ENSMUST00000111047.9	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109524254	109553727	+	109506657	109553727	A5SS	0.1	50	50	ENSMUST00000111047.9	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109524966	109553727	+	109506657	109553727	A5SS	0.1	50	50	ENSMUST00000111047.9	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109540006	109553727	+	109506657	109553727	A5SS	0.1	50	50	ENSMUST00000111047.9	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109507569	109553727	+	109506445	109553727	A5SS	0.1	50	50	ENSMUST00000111049.9	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109523119	109553727	+	109506445	109553727	A5SS	0.1	50	50	ENSMUST00000111049.9	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109523452	109553727	+	109506445	109553727	A5SS	0.1	50	50	ENSMUST00000111049.9	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109524254	109553727	+	109506445	109553727	A5SS	0.1	50	50	ENSMUST00000111049.9	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109524966	109553727	+	109506445	109553727	A5SS	0.1	50	50	ENSMUST00000111049.9	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109540006	109553727	+	109506445	109553727	A5SS	0.1	50	50	ENSMUST00000111049.9	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109523119	109553727	+	109507569	109553727	A5SS	0.1	50	50	ENSMUST00000111046.9	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109523452	109553727	+	109507569	109553727	A5SS	0.1	50	50	ENSMUST00000111046.9	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109524254	109553727	+	109507569	109553727	A5SS	0.1	50	50	ENSMUST00000111046.9	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109524966	109553727	+	109507569	109553727	A5SS	0.1	50	50	ENSMUST00000111046.9	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109540006	109553727	+	109507569	109553727	A5SS	0.1	50	50	ENSMUST00000111046.9	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109523452	109553727	+	109523119	109553727	A5SS	0.1	50	50	ENSMUST00000111050.10	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109524254	109553727	+	109523119	109553727	A5SS	0.1	50	50	ENSMUST00000111050.10	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109524966	109553727	+	109523119	109553727	A5SS	0.1	50	50	ENSMUST00000111050.10	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109540006	109553727	+	109523119	109553727	A5SS	0.1	50	50	ENSMUST00000111050.10	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109524254	109553727	+	109523452	109553727	A5SS	0.1	50	50	ENSMUST00000176893.8	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109524966	109553727	+	109523452	109553727	A5SS	0.1	50	50	ENSMUST00000176893.8	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109540006	109553727	+	109523452	109553727	A5SS	0.1	50	50	ENSMUST00000176893.8	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109524966	109553727	+	109524254	109553727	A5SS	0.1	50	50	ENSMUST00000111045.9	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109540006	109553727	+	109524254	109553727	A5SS	0.1	50	50	ENSMUST00000111045.9	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109524966;109540006	109539932;109553727	+	109524966	109553727	cassetteExon	0.5	100	100	ENSMUST00000111043.9	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109524966	109553727	+	109540006	109553727	5pMXE	0.1	50	50	ENSMUST00000111042.3	ENSMUSG00000048482.15	Bdnf	chr2	protein_coding	brain derived neurotrophic factor
chr2	109748650	109820050	+	109748650;109801108	109801037;109820050	ES	0.33	50	50	ENSMUST00000046548.14	ENSMUSG00000050199.14	Lgr4	chr2	protein_coding	leucine-rich repeat-containing G protein-coupled receptor 4
chr2	109807978	109820050	+	109801108	109820050	A5SS	0.33	50	50	ENSMUST00000046548.14	ENSMUSG00000050199.14	Lgr4	chr2	protein_coding	leucine-rich repeat-containing G protein-coupled receptor 4
chr2	109807978	109820050	+	109748650	109820050	A5SS	0.33	50	50	ENSMUST00000111037.3	ENSMUSG00000050199.14	Lgr4	chr2	protein_coding	leucine-rich repeat-containing G protein-coupled receptor 4
chr2	109862784	109867750	+	109862784	109870919	A3SS	0.5	50	50	ENSMUST00000028580.12	ENSMUSG00000027160.17	Ccdc34	chr2	protein_coding	coiled-coil domain containing 34
chr2	109859484	109862677	+	109852359	109862677	A5SS	0.5	50	50	ENSMUST00000028580.12	ENSMUSG00000027160.17	Ccdc34	chr2	protein_coding	coiled-coil domain containing 34
chr2	109868621	109870919	+	109862784	109870919	A5SS	0.5	50	50	ENSMUST00000028580.12	ENSMUSG00000027160.17	Ccdc34	chr2	protein_coding	coiled-coil domain containing 34
chr2	109852359	109862677	+	109852359	110002796	A3SS	0.5	50	50	ENSMUST00000150183.9	ENSMUSG00000027160.17	Ccdc34	chr2	protein_coding	coiled-coil domain containing 34
chr2	109879822	109880529	-	109861951	109880529	A3SS	0.5	50	50	ENSMUST00000153332.2	ENSMUSG00000086186.2	Ccdc34os	chr2	lncRNA	coiled-coil domain containing 34, opposite strand
chr2	109861951	109877609	-	109861951	109880529	A5SS	0.5	50	50	ENSMUST00000153332.2	ENSMUSG00000086186.2	Ccdc34os	chr2	lncRNA	coiled-coil domain containing 34, opposite strand
chr2	110428285;110435940	110435697;110436069	+	110428285	110436069	cassetteExon	0.5	100	100	ENSMUST00000045972.13	ENSMUSG00000041644.15	Slc5a12	chr2	protein_coding	solute carrier family 5 (sodium/glucose cotransporter), member 12
chr2	110463126;110467529	110467443;110471080	+	110463126;110468404	110468306;110471080	MXE	0.5	100	100	ENSMUST00000045972.13	ENSMUSG00000041644.15	Slc5a12	chr2	protein_coding	solute carrier family 5 (sodium/glucose cotransporter), member 12
chr2	110454597	110463059	+	110454593	110463059	A5SS	0.5	50	50	ENSMUST00000045972.13	ENSMUSG00000041644.15	Slc5a12	chr2	protein_coding	solute carrier family 5 (sodium/glucose cotransporter), member 12
chr2	110543750	110569116	-	110528365	110569116	A3SS	0.5	50	50	ENSMUST00000099623.10	ENSMUSG00000074968.12	Ano3	chr2	protein_coding	anoctamin 3
chr2	110552052;110553350	110553203;110561529	+	110552052	110561529	cassetteExon	0.5	100	100	ENSMUST00000111016.9	ENSMUSG00000050808.14	Muc15	chr2	protein_coding	mucin 15
chr2	110564300	110567747	+	110564300	110567692	A3SS	0.5	50	50	ENSMUST00000111016.9	ENSMUSG00000050808.14	Muc15	chr2	protein_coding	mucin 15
chr2	111034488	111041892	-	111034488	111035410	5pMXE	0.5	50	50	ENSMUST00000142636.8	ENSMUSG00000027157.11	A26c3	chr2	protein_coding	ANKRD26-like family C, member 3
chr2	111084984	111088010	+	111084984	111087444	A3SS	0.5	50	50	ENSMUST00000218065.2	ENSMUSG00000063844.6	Olfr1276	chr2	protein_coding	olfactory receptor 1276
chr2	111120608;111121314	111121271;111121552	+	111120608	111121552	cassetteExon	0.5	100	100	ENSMUST00000214669.2	ENSMUSG00000068647.3	Olfr1278	chr2	protein_coding	olfactory receptor 1278
chr2	111120987	111121552	+	111120608	111121552	A5SS	0.33	50	50	ENSMUST00000214669.2	ENSMUSG00000068647.3	Olfr1278	chr2	protein_coding	olfactory receptor 1278
chr2	111120987	111121552	+	111121314	111121552	A5SS&ES	0.33	50	50	ENSMUST00000215210.2	ENSMUSG00000068647.3	Olfr1278	chr2	protein_coding	olfactory receptor 1278
chr2	111134921	111136437	+	111134921	111136398	A3SS	0.5	50	50	ENSMUST00000216697.2	ENSMUSG00000109813.3	Olfr1279	chr2	protein_coding	olfactory receptor 1279
chr2	111197340	111198926	+	111197276	111198926	A5SS	0.5	50	50	ENSMUST00000204064.4	ENSMUSG00000109322.3	Olfr1283	chr2	protein_coding	olfactory receptor 1283
chr2	111251760	111253364	-	111251760	111253292	A5SS	0.5	50	50	ENSMUST00000213210.2	ENSMUSG00000096703.4	Olfr1286	chr2	protein_coding	olfactory receptor 1286
chr2	111320528;111321727	111321519;111324102	-	111320528	111324102	cassetteExon	0.5	100	100	ENSMUST00000217611.2	ENSMUSG00000095809.4	Olfr1290	chr2	protein_coding	olfactory receptor 1290
chr2	111320528;111323813	111323762;111324102	-	111320528	111324102	cassetteExon	0.5	100	100	ENSMUST00000217611.2	ENSMUSG00000095809.4	Olfr1290	chr2	protein_coding	olfactory receptor 1290
chr2	111320528;111321727	111321519;111324102	-	111320528;111323813	111323762;111324102	MXE	0.5	100	100	ENSMUST00000208881.2	ENSMUSG00000095809.4	Olfr1290	chr2	protein_coding	olfactory receptor 1290
chr2	111395814	111399891	-	111397170	111399891	A3SS	0.5	50	50	ENSMUST00000217772.2	ENSMUSG00000108919.4	Olfr1295	chr2	protein_coding	olfactory receptor 1295
chr2	111491840	111494559	+	111491840;111493374	111493270;111494559	ES	0.5	50	50	ENSMUST00000213511.2	ENSMUSG00000109219.3	Olfr1299	chr2	protein_coding	olfactory receptor 1299
chr2	111498057	111518208	+	111494644	111518208	A5SS	0.5	50	50	ENSMUST00000208983.2	ENSMUSG00000109071.2	Gm44840	chr2	lncRNA	predicted gene 44840
chr2	111607829;111609597	111609330;111610641	+	111607829	111610641	cassetteExon	0.5	100	100	ENSMUST00000214708.2	ENSMUSG00000044560.4	Olfr1302	chr2	protein_coding	olfactory receptor 1302
chr2	111704472;111705613	111705574;111707384	-	111704472	111707384	cassetteExon	0.5	100	100	ENSMUST00000216310.3	ENSMUSG00000074955.4	Olfr1305	chr2	protein_coding	olfactory receptor 1305
chr2	111814450	111815611	-	111814450	111818911	A5SS	0.5	50	50	ENSMUST00000216948.2	ENSMUSG00000109528.3	Olfr1309	chr2	protein_coding	olfactory receptor 1309
chr2	111819518	111819623	-	111819518	111819711	A5SS	0.5	50	50	ENSMUST00000216948.2	ENSMUSG00000109528.3	Olfr1309	chr2	protein_coding	olfactory receptor 1309
chr2	111819831	111820267	-	111819831	111820429	A5SS	0.33	50	50	ENSMUST00000216948.2	ENSMUSG00000109528.3	Olfr1309	chr2	protein_coding	olfactory receptor 1309
chr2	111819831	111820457	-	111819831	111820429	A5SS	0.33	50	50	ENSMUST00000216948.2	ENSMUSG00000109528.3	Olfr1309	chr2	protein_coding	olfactory receptor 1309
chr2	111819831	111820457	-	111819831;111820382	111820267;111820457	ES	0.5	50	50	ENSMUST00000214935.2	ENSMUSG00000109528.3	Olfr1309	chr2	protein_coding	olfactory receptor 1309
chr2	111852199	111854323	-	111852138	111854323	A3SS	0.33	50	50	ENSMUST00000216319.2	ENSMUSG00000109403.3	Olfr1311	chr2	protein_coding	olfactory receptor 1311
chr2	111852232	111854323	-	111852138	111854323	A3SS	0.33	50	50	ENSMUST00000216319.2	ENSMUSG00000109403.3	Olfr1311	chr2	protein_coding	olfactory receptor 1311
chr2	111852232	111854323	-	111852199	111854323	A3SS	0.33	50	50	ENSMUST00000213602.2	ENSMUSG00000109403.3	Olfr1311	chr2	protein_coding	olfactory receptor 1311
chr2	111878381	111880462	-	111878381;111879762	111879703;111880462	ES	0.5	50	50	ENSMUST00000213961.3	ENSMUSG00000074947.4	Olfr1312	chr2	protein_coding	olfactory receptor 1312
chr2	111878353	111879703	-	111878381	111879703	A3SS	0.5	50	50	ENSMUST00000213961.3	ENSMUSG00000074947.4	Olfr1312	chr2	protein_coding	olfactory receptor 1312
chr2	111878381	111880462	-	111879762	111880462	A3SS&ES	0.5	50	50	ENSMUST00000215531.2	ENSMUSG00000074947.4	Olfr1312	chr2	protein_coding	olfactory receptor 1312
chr2	111902967	111908125	-	111902967	111908020	5pMXE	0.5	50	50	ENSMUST00000213577.2	ENSMUSG00000074946.6	Olfr1313	chr2	protein_coding	olfactory receptor 1313
chr2	111941616	111942513	-	111941616	111945771	A5SS	0.5	50	50	ENSMUST00000207542.3	ENSMUSG00000109033.3	Olfr1315-ps1	chr2	protein_coding	olfactory receptor 1315, pseudogene 1
chr2	111971335	111972389	+	111971335	111972256	A3SS	0.5	50	50	ENSMUST00000214801.3	ENSMUSG00000050776.4	Olfr1317	chr2	protein_coding	olfactory receptor 1317
chr2	111985009;111985588	111985376;111986262	+	111985009	111986262	cassetteExon	0.5	100	100	ENSMUST00000215341.2	ENSMUSG00000049758.8	Olfr1318	chr2	protein_coding	olfactory receptor 1318
chr2	111985009;111985588	111985404;111986262	+	111985009	111986262	cassetteExon	0.5	100	100	ENSMUST00000215341.2	ENSMUSG00000049758.8	Olfr1318	chr2	protein_coding	olfactory receptor 1318
chr2	111985009;111985588	111985414;111986262	+	111985009	111986262	cassetteExon	0.5	100	100	ENSMUST00000215341.2	ENSMUSG00000049758.8	Olfr1318	chr2	protein_coding	olfactory receptor 1318
chr2	111985009	111985376	+	111985009	111985404	A3SS	0.25	50	50	ENSMUST00000216873.2	ENSMUSG00000049758.8	Olfr1318	chr2	protein_coding	olfactory receptor 1318
chr2	111985009	111985414	+	111985009	111985404	A3SS	0.25	50	50	ENSMUST00000216873.2	ENSMUSG00000049758.8	Olfr1318	chr2	protein_coding	olfactory receptor 1318
chr2	111985009	111985376	+	111985009	111985414	A3SS	0.25	50	50	ENSMUST00000214063.2	ENSMUSG00000049758.8	Olfr1318	chr2	protein_coding	olfactory receptor 1318
chr2	112073106	112073324	+	112073106	112073349	A3SS	0.5	50	50	ENSMUST00000028554.4	ENSMUSG00000027134.5	Lpcat4	chr2	protein_coding	lysophosphatidylcholine acyltransferase 4
chr2	112097437	112163728	+	112097437;112146630	112146586;112163728	ES	0.5	50	50	ENSMUST00000110991.9	ENSMUSG00000027130.16	Slc12a6	chr2	protein_coding	solute carrier family 12, member 6
chr2	112115150	112146586	+	112097437	112146586	A5SS	0.5	50	50	ENSMUST00000110991.9	ENSMUSG00000027130.16	Slc12a6	chr2	protein_coding	solute carrier family 12, member 6
chr2	112188984	112207429	+	112188984	112190761	3pMXE	0.5	50	50	ENSMUST00000028549.14	ENSMUSG00000027130.16	Slc12a6	chr2	protein_coding	solute carrier family 12, member 6
chr2	112209702	112234506	+	112207825	112234506	A5SS	0.5	50	50	ENSMUST00000141047.2	ENSMUSG00000096764.2	Gm21985	chr2	protein_coding	predicted gene 21985
chr2	112194650	112197678	-	112194650	112197747	A5SS	0.5	50	50	ENSMUST00000028551.4	ENSMUSG00000027131.4	Emc4	chr2	protein_coding	ER membrane protein complex subunit 4
chr2	112389738	112455500	+	112344972	112455500	A5SS	0.33	50	50	ENSMUST00000003705.12	ENSMUSG00000003604.15	Aven	chr2	protein_coding	apoptosis, caspase activation inhibitor
chr2	112390132	112455500	+	112344972	112455500	A5SS	0.33	50	50	ENSMUST00000003705.12	ENSMUSG00000003604.15	Aven	chr2	protein_coding	apoptosis, caspase activation inhibitor
chr2	112390132	112455500	+	112389738	112455500	A5SS	0.33	50	50	ENSMUST00000127894.2	ENSMUSG00000003604.15	Aven	chr2	protein_coding	apoptosis, caspase activation inhibitor
chr2	112492927	112493614	-	112492927;112493352	112493335;112493614	ES	0.5	50	50	ENSMUST00000208151.2	ENSMUSG00000057378.16	Ryr3	chr2	protein_coding	ryanodine receptor 3
chr2	112827032	113047285	-	112827032;112859040	112858921;113047285	ES	0.5	50	50	ENSMUST00000208151.2	ENSMUSG00000057378.16	Ryr3	chr2	protein_coding	ryanodine receptor 3
chr2	112477464;112478743	112478657;112479618	-	112477464	112479618	cassetteExon	0.5	100	100	ENSMUST00000208151.2	ENSMUSG00000057378.16	Ryr3	chr2	protein_coding	ryanodine receptor 3
chr2	112501038;112503610	112503511;112505614	-	112501038;112502676	112502580;112505614	MXE	0.5	100	100	ENSMUST00000208151.2	ENSMUSG00000057378.16	Ryr3	chr2	protein_coding	ryanodine receptor 3
chr2	112508892;112512094	112512080;112516920	-	112508892	112516920	cassetteExon	0.5	100	100	ENSMUST00000208151.2	ENSMUSG00000057378.16	Ryr3	chr2	protein_coding	ryanodine receptor 3
chr2	112797572;112820185	112820165;112826925	-	112797572	112826925	cassetteExon	0.5	100	100	ENSMUST00000208151.2	ENSMUSG00000057378.16	Ryr3	chr2	protein_coding	ryanodine receptor 3
chr2	112690876	112692138	-	112690873	112692138	A3SS	0.5	50	50	ENSMUST00000208151.2	ENSMUSG00000057378.16	Ryr3	chr2	protein_coding	ryanodine receptor 3
chr2	112859040	112860566	-	112859040	113047285	A5SS	0.5	50	50	ENSMUST00000208151.2	ENSMUSG00000057378.16	Ryr3	chr2	protein_coding	ryanodine receptor 3
chr2	113426737;113430021	113429914;113433514	+	113426737	113433514	cassetteExon	0.5	100	100	ENSMUST00000099576.9	ENSMUSG00000044042.20	Fmn1	chr2	protein_coding	formin 1
chr2	113309308	113328135	+	113309308	113355496	A3SS	0.5	50	50	ENSMUST00000099576.9	ENSMUSG00000044042.20	Fmn1	chr2	protein_coding	formin 1
chr2	113235698	113259982	+	113196174	113259982	A5SS	0.5	50	50	ENSMUST00000099576.9	ENSMUSG00000044042.20	Fmn1	chr2	protein_coding	formin 1
chr2	113273004	113274687	+	113260157	113274687	A5SS	0.5	50	50	ENSMUST00000099576.9	ENSMUSG00000044042.20	Fmn1	chr2	protein_coding	formin 1
chr2	113516250	113518454	+	113467169	113518454	A5SS	0.25	50	50	ENSMUST00000099576.9	ENSMUSG00000044042.20	Fmn1	chr2	protein_coding	formin 1
chr2	113516822	113518454	+	113467169	113518454	A5SS	0.25	50	50	ENSMUST00000099576.9	ENSMUSG00000044042.20	Fmn1	chr2	protein_coding	formin 1
chr2	113518148	113518454	+	113467169	113518454	A5SS	0.25	50	50	ENSMUST00000099576.9	ENSMUSG00000044042.20	Fmn1	chr2	protein_coding	formin 1
chr2	113539174	113539761	+	113538292	113539761	A5SS	0.5	50	50	ENSMUST00000099576.9	ENSMUSG00000044042.20	Fmn1	chr2	protein_coding	formin 1
chr2	113196174	113259982	+	113196174	113309247	A3SS	0.5	50	50	ENSMUST00000110954.7	ENSMUSG00000044042.20	Fmn1	chr2	protein_coding	formin 1
chr2	113274804	113309247	+	113196174	113309247	A5SS	0.5	50	50	ENSMUST00000110954.7	ENSMUSG00000044042.20	Fmn1	chr2	protein_coding	formin 1
chr2	113235698	113259982	+	113235698	113240239	3pMXE	0.5	50	50	ENSMUST00000154834.2	ENSMUSG00000044042.20	Fmn1	chr2	protein_coding	formin 1
chr2	113516250	113518454	+	113516250;113518148	113518087;113518454	ES	0.33	50	50	ENSMUST00000150510.8	ENSMUSG00000044042.20	Fmn1	chr2	protein_coding	formin 1
chr2	113516822	113518454	+	113518148	113518454	A5SS&ES	0.33	50	50	ENSMUST00000150510.8	ENSMUSG00000044042.20	Fmn1	chr2	protein_coding	formin 1
chr2	113516822	113518454	+	113516250	113518454	A5SS	0.33	50	50	ENSMUST00000145891.8	ENSMUSG00000044042.20	Fmn1	chr2	protein_coding	formin 1
chr2	113657916	113658747	-	113657916	113659344	A5SS	0.5	50	50	ENSMUST00000024005.8	ENSMUSG00000023236.8	Scg5	chr2	protein_coding	secretogranin V
chr2	113664807;113665261	113665123;113667211	-	113664807	113667211	cassetteExon	0.5	100	100	ENSMUST00000110948.8	ENSMUSG00000041219.15	Arhgap11a	chr2	protein_coding	Rho GTPase activating protein 11A
chr2	113664807	113667211	-	113665261	113667211	A3SS	0.5	50	50	ENSMUST00000110947.2	ENSMUSG00000041219.15	Arhgap11a	chr2	protein_coding	Rho GTPase activating protein 11A
chr2	113844378	113861675	+	113844378	113847473	A3SS&ES	0.5	50	50	ENSMUST00000131299.8	ENSMUSG00000092201.8	A530058N18Rik	chr2	lncRNA	RIKEN cDNA A530058N18 gene
chr2	113847514	113847641	+	113847514	113850663	A3SS	0.33	50	50	ENSMUST00000131299.8	ENSMUSG00000092201.8	A530058N18Rik	chr2	lncRNA	RIKEN cDNA A530058N18 gene
chr2	113847514	113850667	+	113847514	113850663	A3SS	0.33	50	50	ENSMUST00000131299.8	ENSMUSG00000092201.8	A530058N18Rik	chr2	lncRNA	RIKEN cDNA A530058N18 gene
chr2	113850689	113858189	+	113850689	113853710	A3SS&ES	0.33	50	50	ENSMUST00000131299.8	ENSMUSG00000092201.8	A530058N18Rik	chr2	lncRNA	RIKEN cDNA A530058N18 gene
chr2	113850689	113861675	+	113850689	113853710	A3SS&ES	0.33	50	50	ENSMUST00000131299.8	ENSMUSG00000092201.8	A530058N18Rik	chr2	lncRNA	RIKEN cDNA A530058N18 gene
chr2	113853758	113861675	+	113853758	113887565	A3SS	0.5	50	50	ENSMUST00000131299.8	ENSMUSG00000092201.8	A530058N18Rik	chr2	lncRNA	RIKEN cDNA A530058N18 gene
chr2	113894501	113894885	+	113894501	113898306	A3SS	0.5	50	50	ENSMUST00000131299.8	ENSMUSG00000092201.8	A530058N18Rik	chr2	lncRNA	RIKEN cDNA A530058N18 gene
chr2	113885847	113887565	+	113853758	113887565	A5SS	0.33	50	50	ENSMUST00000131299.8	ENSMUSG00000092201.8	A530058N18Rik	chr2	lncRNA	RIKEN cDNA A530058N18 gene
chr2	113886848	113887565	+	113853758	113887565	A5SS	0.33	50	50	ENSMUST00000131299.8	ENSMUSG00000092201.8	A530058N18Rik	chr2	lncRNA	RIKEN cDNA A530058N18 gene
chr2	113847514	113847641	+	113847514	113850667	A3SS	0.33	50	50	ENSMUST00000140041.2	ENSMUSG00000092201.8	A530058N18Rik	chr2	lncRNA	RIKEN cDNA A530058N18 gene
chr2	113850689	113861675	+	113850689	113858189	3pMXE	0.33	50	50	ENSMUST00000141209.8	ENSMUSG00000087694.9	A530058N18Rik	chr2	lncRNA	RIKEN cDNA A530058N18 gene
chr2	113850689	113861675	+	113850689;113853758	113853710;113861675	ES	0.33	50	50	ENSMUST00000135729.8	ENSMUSG00000087694.9	A530058N18Rik	chr2	lncRNA	RIKEN cDNA A530058N18 gene
chr2	113850689	113861675	+	113844378	113861675	A5SS	0.33	50	50	ENSMUST00000134129.2	ENSMUSG00000087694.9	A530058N18Rik	chr2	lncRNA	RIKEN cDNA A530058N18 gene
chr2	113853758	113861675	+	113844378	113861675	A5SS	0.33	50	50	ENSMUST00000134129.2	ENSMUSG00000087694.9	A530058N18Rik	chr2	lncRNA	RIKEN cDNA A530058N18 gene
chr2	113882541	113883885	-	113882541	113883243	5pMXE	0.5	50	50	ENSMUST00000090269.7	ENSMUSG00000068614.8	Actc1	chr2	protein_coding	actin, alpha, cardiac muscle 1
chr2	113885847	113887557	+	113885847	113887565	A3SS	0.5	50	50	ENSMUST00000154140.8	ENSMUSG00000092397.8	C130080G10Rik	chr2	lncRNA	RIKEN cDNA C130080G10 gene
chr2	113886848	113887565	+	113885847	113887565	A5SS	0.5	50	50	ENSMUST00000154140.8	ENSMUSG00000092397.8	C130080G10Rik	chr2	lncRNA	RIKEN cDNA C130080G10 gene
chr2	113935842	113936281	-	113934598	113936281	A3SS	0.5	50	50	ENSMUST00000043160.13	ENSMUSG00000040383.17	Aqr	chr2	protein_coding	aquarius
chr2	113989640	113992045	-	113989491	113992045	A3SS	0.5	50	50	ENSMUST00000043160.13	ENSMUSG00000040383.17	Aqr	chr2	protein_coding	aquarius
chr2	114005897	114017407	-	114005897	114011431	5pMXE	0.5	50	50	ENSMUST00000147191.8	ENSMUSG00000040383.17	Aqr	chr2	protein_coding	aquarius
chr2	114031533	114031818	-	114028108	114031818	A3SS	0.5	50	50	ENSMUST00000050668.4	ENSMUSG00000040321.4	Zfp770	chr2	protein_coding	zinc finger protein 770
chr2	114350280;114353619	114353525;114366006	-	114350280	114366006	cassetteExon	0.5	100	100	ENSMUST00000028640.14	ENSMUSG00000057147.14	Dph6	chr2	protein_coding	diphthamine biosynthesis 6
chr2	114348773	114350150	-	114348773	114350193	A5SS	0.5	50	50	ENSMUST00000028640.14	ENSMUSG00000057147.14	Dph6	chr2	protein_coding	diphthamine biosynthesis 6
chr2	114366067	114376210	-	114366067	114398401	A5SS	0.5	50	50	ENSMUST00000028640.14	ENSMUSG00000057147.14	Dph6	chr2	protein_coding	diphthamine biosynthesis 6
chr2	114350280	114366006	-	114353619	114366006	3pMXE	0.5	50	50	ENSMUST00000150447.8	ENSMUSG00000057147.14	Dph6	chr2	protein_coding	diphthamine biosynthesis 6
chr2	115326524	115328202	-	115326488	115328202	A3SS	0.5	50	50	ENSMUST00000134580.2	ENSMUSG00000085582.8	3110099E03Rik	chr2	lncRNA	RIKEN cDNA 3110099E03 gene
chr2	115328363	115342620	-	115328287	115342620	A3SS	0.5	50	50	ENSMUST00000134580.2	ENSMUSG00000085582.8	3110099E03Rik	chr2	lncRNA	RIKEN cDNA 3110099E03 gene
chr2	115328363	115342620	-	115328363	115332962	A5SS&ES	0.5	50	50	ENSMUST00000143695.8	ENSMUSG00000085582.8	3110099E03Rik	chr2	lncRNA	RIKEN cDNA 3110099E03 gene
chr2	115516931	115517545	+	115516931	115517527	A3SS	0.5	50	50	ENSMUST00000166472.8	ENSMUSG00000040282.14	Cdin1	chr2	protein_coding	CDAN1 interacting nuclease 1
chr2	115694994;115697385	115697291;115697750	-	115694994	115697750	cassetteExon	0.5	100	100	ENSMUST00000028639.13	ENSMUSG00000027210.21	Meis2	chr2	protein_coding	Meis homeobox 2
chr2	115830757;115872608	115872420;115879565	-	115830757	115879565	cassetteExon	0.5	100	100	ENSMUST00000028639.13	ENSMUSG00000027210.21	Meis2	chr2	protein_coding	Meis homeobox 2
chr2	115697839	115699226	-	115697860	115699226	A3SS	0.5	50	50	ENSMUST00000028639.13	ENSMUSG00000027210.21	Meis2	chr2	protein_coding	Meis homeobox 2
chr2	115892050	115893669	-	115892073	115893669	A3SS	0.5	50	50	ENSMUST00000028639.13	ENSMUSG00000027210.21	Meis2	chr2	protein_coding	Meis homeobox 2
chr2	115699284	115703257	-	115699284	115752153	A5SS	0.5	50	50	ENSMUST00000028639.13	ENSMUSG00000027210.21	Meis2	chr2	protein_coding	Meis homeobox 2
chr2	115879679	115880082	-	115879679	115889112	A5SS	0.5	50	50	ENSMUST00000028639.13	ENSMUSG00000027210.21	Meis2	chr2	protein_coding	Meis homeobox 2
chr2	115892073	115892881	-	115892073	115893669	A5SS	0.5	50	50	ENSMUST00000028639.13	ENSMUSG00000027210.21	Meis2	chr2	protein_coding	Meis homeobox 2
chr2	115893901	115894573	-	115893901	115895283	A5SS	0.33	50	50	ENSMUST00000028639.13	ENSMUSG00000027210.21	Meis2	chr2	protein_coding	Meis homeobox 2
chr2	115893901	115894865	-	115893901	115895283	A5SS	0.33	50	50	ENSMUST00000028639.13	ENSMUSG00000027210.21	Meis2	chr2	protein_coding	Meis homeobox 2
chr2	115893901	115894865	-	115893901	115894573	A5SS	0.33	50	50	ENSMUST00000110906.9	ENSMUSG00000027210.21	Meis2	chr2	protein_coding	Meis homeobox 2
chr2	115830757	115879565	-	115830757	115872420	5pMXE	0.5	50	50	ENSMUST00000151279.8	ENSMUSG00000027210.21	Meis2	chr2	protein_coding	Meis homeobox 2
chr2	115869090	115872420	-	115830757	115872420	A3SS	0.5	50	50	ENSMUST00000151279.8	ENSMUSG00000027210.21	Meis2	chr2	protein_coding	Meis homeobox 2
chr2	115694994	115697750	-	115697385	115697750	3pMXE	0.5	50	50	ENSMUST00000118654.8	ENSMUSG00000027210.21	Meis2	chr2	protein_coding	Meis homeobox 2
chr2	116716787	116717719	+	116716787;116717270	116717241;116717719	ES	0.5	50	50	ENSMUST00000123598.8	ENSMUSG00000027355.16	Tmco5	chr2	protein_coding	transmembrane and coiled-coil domains 5
chr2	116716787	116717211	+	116716787	116717241	A3SS	0.33	50	50	ENSMUST00000123598.8	ENSMUSG00000027355.16	Tmco5	chr2	protein_coding	transmembrane and coiled-coil domains 5
chr2	116716787;116717270	116717211;116717719	+	116716787	116717719	cassetteExon	0.5	100	100	ENSMUST00000155470.8	ENSMUSG00000027355.16	Tmco5	chr2	protein_coding	transmembrane and coiled-coil domains 5
chr2	116730812	116731457	+	116730812	116741202	A3SS	0.33	50	50	ENSMUST00000126467.2	ENSMUSG00000085316.2	D330050G23Rik	chr2	lncRNA	RIKEN cDNA D330050G23 gene
chr2	116730812	116734523	+	116730812	116741202	A3SS	0.33	50	50	ENSMUST00000126467.2	ENSMUSG00000085316.2	D330050G23Rik	chr2	lncRNA	RIKEN cDNA D330050G23 gene
chr2	116730812	116734523	+	116730812	116731457	A3SS&ES	0.33	50	50	ENSMUST00000128305.2	ENSMUSG00000085316.2	D330050G23Rik	chr2	lncRNA	RIKEN cDNA D330050G23 gene
chr2	117080319	117088115	+	117080319;117086057	117085970;117088115	ES	0.5	50	50	ENSMUST00000140936.2	ENSMUSG00000027349.6	Fam98b	chr2	protein_coding	family with sequence similarity 98, member B
chr2	117113157	117116553	-	117113157;117115713	117115334;117116553	ES	0.5	50	50	ENSMUST00000102534.11	ENSMUSG00000027347.19	Rasgrp1	chr2	protein_coding	RAS guanyl releasing protein 1
chr2	117117359	117119098	-	117117359;117118449	117118305;117119098	ES	0.5	50	50	ENSMUST00000102534.11	ENSMUSG00000027347.19	Rasgrp1	chr2	protein_coding	RAS guanyl releasing protein 1
chr2	117119207	117120797	-	117119207;117119930	117119826;117120797	ES	0.5	50	50	ENSMUST00000102534.11	ENSMUSG00000027347.19	Rasgrp1	chr2	protein_coding	RAS guanyl releasing protein 1
chr2	117113157	117117323	-	117113157;117116705	117116553;117117323	ES	0.5	50	50	ENSMUST00000172901.8	ENSMUSG00000027347.19	Rasgrp1	chr2	protein_coding	RAS guanyl releasing protein 1
chr2	117113157	117115334	-	117113157	117117323	A5SS	0.33	50	50	ENSMUST00000173252.2	ENSMUSG00000027347.19	Rasgrp1	chr2	protein_coding	RAS guanyl releasing protein 1
chr2	117902323	117932795	-	117902323;117902733	117902624;117932795	ES	0.5	50	50	ENSMUST00000148587.8	ENSMUSG00000087203.8	Gm13986	chr2	lncRNA	predicted gene 13986
chr2	118083899	118109779	-	118083899	118087281	5pMXE	0.5	50	50	ENSMUST00000231133.2	ENSMUSG00000027344.15	Fsip1	chr2	protein_coding	fibrous sheath-interacting protein 1
chr2	118035655	118052807	-	117967105	118052807	A3SS	0.5	50	50	ENSMUST00000231133.2	ENSMUSG00000027344.15	Fsip1	chr2	protein_coding	fibrous sheath-interacting protein 1
chr2	118075446	118078776	-	118072216	118078776	A3SS	0.5	50	50	ENSMUST00000231133.2	ENSMUSG00000027344.15	Fsip1	chr2	protein_coding	fibrous sheath-interacting protein 1
chr2	117967105	117971509	-	117967105	118052807	A5SS	0.5	50	50	ENSMUST00000231133.2	ENSMUSG00000027344.15	Fsip1	chr2	protein_coding	fibrous sheath-interacting protein 1
chr2	118231128	118238833	+	118231128;118235630	118235528;118238833	ES	0.5	50	50	ENSMUST00000110877.8	ENSMUSG00000005102.14	Eif2ak4	chr2	protein_coding	eukaryotic translation initiation factor 2 alpha kinase 4
chr2	118231128;118231821	118231507;118235528	+	118231128	118235528	cassetteExon	0.5	100	100	ENSMUST00000110877.8	ENSMUSG00000005102.14	Eif2ak4	chr2	protein_coding	eukaryotic translation initiation factor 2 alpha kinase 4
chr2	118219627	118231016	+	118219333	118231016	A5SS	0.5	50	50	ENSMUST00000110877.8	ENSMUSG00000005102.14	Eif2ak4	chr2	protein_coding	eukaryotic translation initiation factor 2 alpha kinase 4
chr2	118231128	118231507	+	118231128	118238833	A3SS	0.33	50	50	ENSMUST00000102527.10	ENSMUSG00000005102.14	Eif2ak4	chr2	protein_coding	eukaryotic translation initiation factor 2 alpha kinase 4
chr2	118307340	118309313	-	118307340	118309402	A5SS	0.5	50	50	ENSMUST00000009693.15	ENSMUSG00000009549.15	Srp14	chr2	protein_coding	signal recognition particle 14
chr2	118309931	118310031	-	118309931	118310072	A5SS	0.5	50	50	ENSMUST00000009693.15	ENSMUSG00000009549.15	Srp14	chr2	protein_coding	signal recognition particle 14
chr2	118377493;118377851	118377775;118379522	-	118377493	118379522	cassetteExon	0.5	100	100	ENSMUST00000090219.13	ENSMUSG00000040093.17	Bmf	chr2	protein_coding	BCL2 modifying factor
chr2	118363140	118374850	-	118363140	118375563	A5SS	0.33	50	50	ENSMUST00000090219.13	ENSMUSG00000040093.17	Bmf	chr2	protein_coding	BCL2 modifying factor
chr2	118377493	118377852	-	118377493	118379522	A5SS	0.25	50	50	ENSMUST00000090219.13	ENSMUSG00000040093.17	Bmf	chr2	protein_coding	BCL2 modifying factor
chr2	118377493	118377977	-	118377493	118379522	A5SS	0.25	50	50	ENSMUST00000090219.13	ENSMUSG00000040093.17	Bmf	chr2	protein_coding	BCL2 modifying factor
chr2	118377493	118377775	-	118377493	118377852	A5SS	0.25	50	50	ENSMUST00000110859.3	ENSMUSG00000040093.17	Bmf	chr2	protein_coding	BCL2 modifying factor
chr2	118377493	118377977	-	118377493	118377852	A5SS	0.25	50	50	ENSMUST00000110859.3	ENSMUSG00000040093.17	Bmf	chr2	protein_coding	BCL2 modifying factor
chr2	118363140	118380021	-	118363140	118374850	5pMXE	0.33	50	50	ENSMUST00000143583.2	ENSMUSG00000040093.17	Bmf	chr2	protein_coding	BCL2 modifying factor
chr2	118363140	118380021	-	118363140	118375563	5pMXE	0.33	50	50	ENSMUST00000154521.2	ENSMUSG00000040093.17	Bmf	chr2	protein_coding	BCL2 modifying factor
chr2	118379651	118380021	-	118363140	118380021	A3SS	0.5	50	50	ENSMUST00000152123.2	ENSMUSG00000040093.17	Bmf	chr2	protein_coding	BCL2 modifying factor
chr2	118377493	118377775	-	118377493	118377977	A5SS	0.25	50	50	ENSMUST00000146962.2	ENSMUSG00000040093.17	Bmf	chr2	protein_coding	BCL2 modifying factor
chr2	118494794	118495264	+	118494504	118495264	A5SS	0.5	50	50	ENSMUST00000099557.10	ENSMUSG00000074923.11	Pak6	chr2	protein_coding	p21 (RAC1) activated kinase 6
chr2	118507782	118508204	+	118495347	118508204	A5SS	0.5	50	50	ENSMUST00000099557.10	ENSMUSG00000074923.11	Pak6	chr2	protein_coding	p21 (RAC1) activated kinase 6
chr2	118554289	118555498	-	118554289;118554937	118554869;118555498	ES	0.5	50	50	ENSMUST00000102524.8	ENSMUSG00000040061.18	Plcb2	chr2	protein_coding	phospholipase C, beta 2
chr2	118606269	118608196	+	118605178	118608196	A5SS	0.5	50	50	ENSMUST00000061360.4	ENSMUSG00000046804.14	Phgr1	chr2	protein_coding	proline/histidine/glycine-rich 1
chr2	118618595	118620080	+	118618595	118641203	A3SS	0.33	50	50	ENSMUST00000063975.10	ENSMUSG00000040035.15	Disp2	chr2	protein_coding	dispatched RND tramsporter family member 2
chr2	118618595	118625846	+	118618595	118641203	A3SS	0.33	50	50	ENSMUST00000063975.10	ENSMUSG00000040035.15	Disp2	chr2	protein_coding	dispatched RND tramsporter family member 2
chr2	118610410	118616527	+	118610425	118616527	A5SS	0.5	50	50	ENSMUST00000063975.10	ENSMUSG00000040035.15	Disp2	chr2	protein_coding	dispatched RND tramsporter family member 2
chr2	118636898	118641203	+	118618595	118641203	A5SS	0.5	50	50	ENSMUST00000063975.10	ENSMUSG00000040035.15	Disp2	chr2	protein_coding	dispatched RND tramsporter family member 2
chr2	118618595	118625846	+	118618595	118620080	3pMXE	0.33	50	50	ENSMUST00000037547.9	ENSMUSG00000040035.15	Disp2	chr2	protein_coding	dispatched RND tramsporter family member 2
chr2	118644973	118649316	+	118644973;118648471	118648345;118649316	ES	0.5	50	50	ENSMUST00000134661.8	ENSMUSG00000027331.16	Knstrn	chr2	protein_coding	kinetochore-localized astrin/SPAG5 binding
chr2	118654267	118662034	+	118654267;118659495	118659440;118662034	ES	0.33	50	50	ENSMUST00000134661.8	ENSMUSG00000027331.16	Knstrn	chr2	protein_coding	kinetochore-localized astrin/SPAG5 binding
chr2	118659495;118661450	118661293;118662034	+	118659495	118662034	cassetteExon	0.5	100	100	ENSMUST00000134661.8	ENSMUSG00000027331.16	Knstrn	chr2	protein_coding	kinetochore-localized astrin/SPAG5 binding
chr2	118659495;118661450	118661354;118662034	+	118659495	118662034	cassetteExon	0.5	100	100	ENSMUST00000134661.8	ENSMUSG00000027331.16	Knstrn	chr2	protein_coding	kinetochore-localized astrin/SPAG5 binding
chr2	118644973;118649363	118649316;118653901	+	118644973	118653901	cassetteExon	0.5	100	100	ENSMUST00000177103.8	ENSMUSG00000027331.16	Knstrn	chr2	protein_coding	kinetochore-localized astrin/SPAG5 binding
chr2	118644973	118648345	+	118644973	118653901	A3SS	0.33	50	50	ENSMUST00000177103.8	ENSMUSG00000027331.16	Knstrn	chr2	protein_coding	kinetochore-localized astrin/SPAG5 binding
chr2	118661450	118662034	+	118654267	118662034	A5SS	0.33	50	50	ENSMUST00000028803.14	ENSMUSG00000027331.16	Knstrn	chr2	protein_coding	kinetochore-localized astrin/SPAG5 binding
chr2	118659495	118662034	+	118659495	118661354	3pMXE	0.33	50	50	ENSMUST00000126045.8	ENSMUSG00000027331.16	Knstrn	chr2	protein_coding	kinetochore-localized astrin/SPAG5 binding
chr2	118659495	118661293	+	118659495	118661354	A3SS	0.33	50	50	ENSMUST00000126045.8	ENSMUSG00000027331.16	Knstrn	chr2	protein_coding	kinetochore-localized astrin/SPAG5 binding
chr2	118664700	118684132	+	118664700	118667395	3pMXE	0.5	50	50	ENSMUST00000176463.2	ENSMUSG00000027331.16	Knstrn	chr2	protein_coding	kinetochore-localized astrin/SPAG5 binding
chr2	118702028;118702888	118702663;118703366	+	118702028	118703366	cassetteExon	0.5	100	100	ENSMUST00000028807.6	ENSMUSG00000027332.12	Ivd	chr2	protein_coding	isovaleryl coenzyme A dehydrogenase
chr2	118706280	118706797	+	118705242	118706797	A5SS	0.5	50	50	ENSMUST00000028807.6	ENSMUSG00000027332.12	Ivd	chr2	protein_coding	isovaleryl coenzyme A dehydrogenase
chr2	118702028	118703366	+	118702028	118702663	3pMXE	0.5	50	50	ENSMUST00000141836.2	ENSMUSG00000027332.12	Ivd	chr2	protein_coding	isovaleryl coenzyme A dehydrogenase
chr2	118702028	118703366	+	118702888	118703366	5pMXE	0.5	50	50	ENSMUST00000150162.8	ENSMUSG00000027332.12	Ivd	chr2	protein_coding	isovaleryl coenzyme A dehydrogenase
chr2	118732238	118746369	+	118730927	118746369	A5SS	0.5	50	50	ENSMUST00000151162.2	ENSMUSG00000040007.9	Bahd1	chr2	protein_coding	bromo adjacent homology domain containing 1
chr2	118857868	118859789	-	118857868	118859798	A5SS	0.5	50	50	ENSMUST00000036470.14	ENSMUSG00000039983.14	Ccdc32	chr2	protein_coding	coiled-coil domain containing 32
chr2	118877707	118887762	+	118877704	118887762	A5SS	0.33	50	50	ENSMUST00000152380.8	ENSMUSG00000027326.14	Knl1	chr2	protein_coding	kinetochore scaffold 1
chr2	118878041	118887762	+	118877704	118887762	A5SS	0.33	50	50	ENSMUST00000152380.8	ENSMUSG00000027326.14	Knl1	chr2	protein_coding	kinetochore scaffold 1
chr2	118878041	118887762	+	118877707	118887762	A5SS	0.33	50	50	ENSMUST00000153300.8	ENSMUSG00000027326.14	Knl1	chr2	protein_coding	kinetochore scaffold 1
chr2	118949226	118951907	+	118949226;118951053	118950925;118951907	ES	0.5	50	50	ENSMUST00000140939.8	ENSMUSG00000027323.11	Rad51	chr2	protein_coding	RAD51 recombinase
chr2	118962098	118964868	+	118962098;118964684	118964555;118964868	ES	0.5	50	50	ENSMUST00000028795.10	ENSMUSG00000027323.11	Rad51	chr2	protein_coding	RAD51 recombinase
chr2	118964989	118977723	+	118964989	118965530	3pMXE	0.33	50	50	ENSMUST00000028795.10	ENSMUSG00000027323.11	Rad51	chr2	protein_coding	RAD51 recombinase
chr2	118964989;118965412	118965363;118965530	+	118964989	118965530	cassetteExon	0.5	100	100	ENSMUST00000028795.10	ENSMUSG00000027323.11	Rad51	chr2	protein_coding	RAD51 recombinase
chr2	118964989	118965363	+	118964989	118977723	A3SS	0.33	50	50	ENSMUST00000151406.2	ENSMUSG00000027323.11	Rad51	chr2	protein_coding	RAD51 recombinase
chr2	118962098	118964868	+	118962098	118964555	A3SS	0.5	50	50	ENSMUST00000154683.2	ENSMUSG00000027323.11	Rad51	chr2	protein_coding	RAD51 recombinase
chr2	118987032	118987164	-	118987032	118987388	A5SS	0.33	50	50	ENSMUST00000094695.12	ENSMUSG00000070730.12	Rmdn3	chr2	protein_coding	regulator of microtubule dynamics 3
chr2	118987032	118987305	-	118987032	118987388	A5SS	0.33	50	50	ENSMUST00000094695.12	ENSMUSG00000070730.12	Rmdn3	chr2	protein_coding	regulator of microtubule dynamics 3
chr2	118987032	118987305	-	118987032	118987164	A5SS	0.33	50	50	ENSMUST00000135419.8	ENSMUSG00000070730.12	Rmdn3	chr2	protein_coding	regulator of microtubule dynamics 3
chr2	119011161	119011407	-	119011045	119011407	A3SS	0.5	50	50	ENSMUST00000038439.4	ENSMUSG00000034278.4	Dnajc17	chr2	protein_coding	DnaJ heat shock protein family (Hsp40) member C17
chr2	119039664	119040611	+	119039459	119040611	A5SS	0.5	50	50	ENSMUST00000149036.8	ENSMUSG00000068580.12	Zfyve19	chr2	protein_coding	zinc finger, FYVE domain containing 19
chr2	119039664	119040963	+	119040713	119040963	A5SS&ES	0.5	50	50	ENSMUST00000149036.8	ENSMUSG00000068580.12	Zfyve19	chr2	protein_coding	zinc finger, FYVE domain containing 19
chr2	119046788	119047110	+	119046788;119047022	119046913;119047110	ES	0.5	50	50	ENSMUST00000090174.11	ENSMUSG00000068580.12	Zfyve19	chr2	protein_coding	zinc finger, FYVE domain containing 19
chr2	119039664;119040713	119040611;119040963	+	119039664	119040963	cassetteExon	0.5	100	100	ENSMUST00000090174.11	ENSMUSG00000068580.12	Zfyve19	chr2	protein_coding	zinc finger, FYVE domain containing 19
chr2	119039664;119040713	119040616;119040963	+	119039664	119040963	cassetteExon	0.5	100	100	ENSMUST00000090174.11	ENSMUSG00000068580.12	Zfyve19	chr2	protein_coding	zinc finger, FYVE domain containing 19
chr2	119042024	119042111	+	119042024	119042387	A3SS	0.5	50	50	ENSMUST00000090174.11	ENSMUSG00000068580.12	Zfyve19	chr2	protein_coding	zinc finger, FYVE domain containing 19
chr2	119039664	119040611	+	119039664	119040616	A3SS	0.33	50	50	ENSMUST00000142644.8	ENSMUSG00000068580.12	Zfyve19	chr2	protein_coding	zinc finger, FYVE domain containing 19
chr2	119046788	119047110	+	119047022	119047110	A5SS	0.5	50	50	ENSMUST00000147584.2	ENSMUSG00000068580.12	Zfyve19	chr2	protein_coding	zinc finger, FYVE domain containing 19
chr2	119049328;119058302	119058238;119060023	-	119049328	119060023	cassetteExon	0.5	100	100	ENSMUST00000076084.6	ENSMUSG00000027317.9	Ppp1r14d	chr2	protein_coding	protein phosphatase 1, regulatory inhibitor subunit 14D
chr2	119068027	119068182	+	119067953	119068182	A5SS	0.5	50	50	ENSMUST00000028783.14	ENSMUSG00000027315.14	Spint1	chr2	protein_coding	serine protease inhibitor, Kunitz type 1
chr2	119119611	119120602	+	119119611	119120634	A3SS	0.5	50	50	ENSMUST00000139367.8	ENSMUSG00000034216.13	Vps18	chr2	protein_coding	VPS18 CORVET/HOPS core subunit
chr2	119152147	119155649	-	119152147;119155457	119155326;119155649	ES	0.5	50	50	ENSMUST00000147929.8	ENSMUSG00000074912.11	Gm14207	chr2	lncRNA	predicted gene 14207
chr2	119155810	119156462	-	119155810	119155980	5pMXE	0.5	50	50	ENSMUST00000147929.8	ENSMUSG00000074912.11	Gm14207	chr2	lncRNA	predicted gene 14207
chr2	119161662	119162519	+	119161662	119162624	A3SS	0.5	50	50	ENSMUST00000102517.4	ENSMUSG00000027314.7	Dll4	chr2	protein_coding	delta like canonical Notch ligand 4
chr2	119233428	119237297	-	119232905	119237297	A3SS	0.5	50	50	ENSMUST00000049920.14	ENSMUSG00000034154.16	Ino80	chr2	protein_coding	INO80 complex subunit
chr2	119372025	119377488	-	119372025;119377363	119377270;119377488	ES	0.5	50	50	ENSMUST00000060009.9	ENSMUSG00000048647.10	Exd1	chr2	protein_coding	exonuclease 3'-5' domain containing 1
chr2	119390228	119391212	+	119378398	119391212	A5SS	0.5	50	50	ENSMUST00000014221.13	ENSMUSG00000014077.14	Chp1	chr2	protein_coding	calcineurin-like EF hand protein 1
chr2	119426992	119430069	+	119426823	119430069	A5SS	0.5	50	50	ENSMUST00000147425.2	ENSMUSG00000085438.2	Oip5os1	chr2	lncRNA	Opa interacting protein 5, opposite strand 1
chr2	119460986	119465959	+	119460986;119464299	119464201;119465959	ES	0.33	50	50	ENSMUST00000068225.15	ENSMUSG00000027306.16	Nusap1	chr2	protein_coding	nucleolar and spindle associated protein 1
chr2	119449376	119454584	+	119449376	119454599	A3SS	0.33	50	50	ENSMUST00000068225.15	ENSMUSG00000027306.16	Nusap1	chr2	protein_coding	nucleolar and spindle associated protein 1
chr2	119458164	119460818	+	119458174	119460818	A5SS	0.5	50	50	ENSMUST00000068225.15	ENSMUSG00000027306.16	Nusap1	chr2	protein_coding	nucleolar and spindle associated protein 1
chr2	119449376	119454584	+	119449376	119465959	A3SS	0.33	50	50	ENSMUST00000153036.2	ENSMUSG00000027306.16	Nusap1	chr2	protein_coding	nucleolar and spindle associated protein 1
chr2	119449376	119454599	+	119449376	119465959	A3SS	0.33	50	50	ENSMUST00000153036.2	ENSMUSG00000027306.16	Nusap1	chr2	protein_coding	nucleolar and spindle associated protein 1
chr2	119460986	119465959	+	119449376	119465959	A5SS	0.33	50	50	ENSMUST00000153036.2	ENSMUSG00000027306.16	Nusap1	chr2	protein_coding	nucleolar and spindle associated protein 1
chr2	119464299	119465959	+	119449376	119465959	A5SS	0.33	50	50	ENSMUST00000153036.2	ENSMUSG00000027306.16	Nusap1	chr2	protein_coding	nucleolar and spindle associated protein 1
chr2	119491140	119493074	-	119491140	119493090	A5SS	0.25	50	50	ENSMUST00000110801.8	ENSMUSG00000027305.10	Ndufaf1	chr2	protein_coding	NADH:ubiquinone oxidoreductase complex assembly factor 1
chr2	119491140	119493240	-	119491140	119493090	A5SS	0.25	50	50	ENSMUST00000110801.8	ENSMUSG00000027305.10	Ndufaf1	chr2	protein_coding	NADH:ubiquinone oxidoreductase complex assembly factor 1
chr2	119491140	119493261	-	119491140	119493090	A5SS	0.25	50	50	ENSMUST00000110801.8	ENSMUSG00000027305.10	Ndufaf1	chr2	protein_coding	NADH:ubiquinone oxidoreductase complex assembly factor 1
chr2	119491140	119493074	-	119491140	119493261	A5SS	0.25	50	50	ENSMUST00000110802.8	ENSMUSG00000027305.10	Ndufaf1	chr2	protein_coding	NADH:ubiquinone oxidoreductase complex assembly factor 1
chr2	119491140	119493240	-	119491140	119493261	A5SS	0.25	50	50	ENSMUST00000110802.8	ENSMUSG00000027305.10	Ndufaf1	chr2	protein_coding	NADH:ubiquinone oxidoreductase complex assembly factor 1
chr2	119491140	119493240	-	119491140	119493074	A5SS	0.25	50	50	ENSMUST00000154127.2	ENSMUSG00000027305.10	Ndufaf1	chr2	protein_coding	NADH:ubiquinone oxidoreductase complex assembly factor 1
chr2	119505761;119522021	119521904;119522597	+	119505761	119522597	cassetteExon	0.5	100	100	ENSMUST00000028767.9	ENSMUSG00000027304.10	Rtf1	chr2	protein_coding	RTF1, Paf1/RNA polymerase II complex component
chr2	119583504	119583908	-	119583504;119583724	119583595;119583908	ES	0.5	50	50	ENSMUST00000140224.8	ENSMUSG00000027297.16	Ltk	chr2	protein_coding	leukocyte tyrosine kinase
chr2	119586194;119588642	119588460;119588728	-	119586194	119588728	cassetteExon	0.5	100	100	ENSMUST00000140224.8	ENSMUSG00000027297.16	Ltk	chr2	protein_coding	leukocyte tyrosine kinase
chr2	119583504	119583908	-	119583504	119583595	A5SS	0.5	50	50	ENSMUST00000127470.8	ENSMUSG00000027297.16	Ltk	chr2	protein_coding	leukocyte tyrosine kinase
chr2	119600213	119600801	-	119600213;119600563	119600368;119600801	ES	0.5	50	50	ENSMUST00000110793.8	ENSMUSG00000034032.16	Rpap1	chr2	protein_coding	RNA polymerase II associated protein 1
chr2	119614451	119617916	-	119614451;119617778	119617668;119617916	ES	0.33	50	50	ENSMUST00000110793.8	ENSMUSG00000034032.16	Rpap1	chr2	protein_coding	RNA polymerase II associated protein 1
chr2	119608782	119613127	-	119610657	119613127	A3SS&ES	0.5	50	50	ENSMUST00000110793.8	ENSMUSG00000034032.16	Rpap1	chr2	protein_coding	RNA polymerase II associated protein 1
chr2	119595396	119598393	-	119595396	119597973	A5SS	0.5	50	50	ENSMUST00000110793.8	ENSMUSG00000034032.16	Rpap1	chr2	protein_coding	RNA polymerase II associated protein 1
chr2	119614451	119617702	-	119614451	119617668	A5SS	0.25	50	50	ENSMUST00000110793.8	ENSMUSG00000034032.16	Rpap1	chr2	protein_coding	RNA polymerase II associated protein 1
chr2	119614451	119617896	-	119614451	119617668	A5SS&ES	0.25	50	50	ENSMUST00000110793.8	ENSMUSG00000034032.16	Rpap1	chr2	protein_coding	RNA polymerase II associated protein 1
chr2	119617778	119617896	-	119617778	119617916	A5SS	0.5	50	50	ENSMUST00000110793.8	ENSMUSG00000034032.16	Rpap1	chr2	protein_coding	RNA polymerase II associated protein 1
chr2	119614451	119617896	-	119614451;119617778	119617702;119617896	ES	0.5	50	50	ENSMUST00000099529.9	ENSMUSG00000034032.16	Rpap1	chr2	protein_coding	RNA polymerase II associated protein 1
chr2	119613712	119617916	-	119613712	119614215	A5SS&ES	0.5	50	50	ENSMUST00000099529.9	ENSMUSG00000034032.16	Rpap1	chr2	protein_coding	RNA polymerase II associated protein 1
chr2	119614451	119617916	-	119614451	119617702	A5SS&ES	0.25	50	50	ENSMUST00000099529.9	ENSMUSG00000034032.16	Rpap1	chr2	protein_coding	RNA polymerase II associated protein 1
chr2	119614451;119617778	119617668;119617896	-	119614451	119617896	cassetteExon	0.5	100	100	ENSMUST00000048493.12	ENSMUSG00000034032.16	Rpap1	chr2	protein_coding	RNA polymerase II associated protein 1
chr2	119614451	119617916	-	119614451	119617896	A5SS	0.25	50	50	ENSMUST00000048493.12	ENSMUSG00000034032.16	Rpap1	chr2	protein_coding	RNA polymerase II associated protein 1
chr2	119613712	119617916	-	119613712;119614451	119614215;119617916	ES	0.33	50	50	ENSMUST00000184294.8	ENSMUSG00000034032.16	Rpap1	chr2	protein_coding	RNA polymerase II associated protein 1
chr2	119614451;119617778	119617702;119617916	-	119614451	119617916	cassetteExon	0.5	100	100	ENSMUST00000184294.8	ENSMUSG00000034032.16	Rpap1	chr2	protein_coding	RNA polymerase II associated protein 1
chr2	119617778	119617916	-	119613712	119617916	A3SS	0.33	50	50	ENSMUST00000141800.2	ENSMUSG00000034032.16	Rpap1	chr2	protein_coding	RNA polymerase II associated protein 1
chr2	119629783	119632029	+	119629525	119632029	A5SS	0.2	50	50	ENSMUST00000110783.8	ENSMUSG00000027298.18	Tyro3	chr2	protein_coding	TYRO3 protein tyrosine kinase 3
chr2	119629896	119632029	+	119629525	119632029	A5SS	0.2	50	50	ENSMUST00000110783.8	ENSMUSG00000027298.18	Tyro3	chr2	protein_coding	TYRO3 protein tyrosine kinase 3
chr2	119630364	119632029	+	119629525	119632029	A5SS	0.2	50	50	ENSMUST00000110783.8	ENSMUSG00000027298.18	Tyro3	chr2	protein_coding	TYRO3 protein tyrosine kinase 3
chr2	119631737	119632029	+	119629525	119632029	A5SS	0.2	50	50	ENSMUST00000110783.8	ENSMUSG00000027298.18	Tyro3	chr2	protein_coding	TYRO3 protein tyrosine kinase 3
chr2	119629896	119632029	+	119629783	119632029	A5SS	0.2	50	50	ENSMUST00000147636.8	ENSMUSG00000027298.18	Tyro3	chr2	protein_coding	TYRO3 protein tyrosine kinase 3
chr2	119630364	119632029	+	119629783	119632029	A5SS	0.2	50	50	ENSMUST00000147636.8	ENSMUSG00000027298.18	Tyro3	chr2	protein_coding	TYRO3 protein tyrosine kinase 3
chr2	119631737	119632029	+	119629783	119632029	A5SS	0.2	50	50	ENSMUST00000147636.8	ENSMUSG00000027298.18	Tyro3	chr2	protein_coding	TYRO3 protein tyrosine kinase 3
chr2	119630364	119632029	+	119629896	119632029	A5SS	0.2	50	50	ENSMUST00000148343.8	ENSMUSG00000027298.18	Tyro3	chr2	protein_coding	TYRO3 protein tyrosine kinase 3
chr2	119631737	119632029	+	119629896	119632029	A5SS	0.2	50	50	ENSMUST00000148343.8	ENSMUSG00000027298.18	Tyro3	chr2	protein_coding	TYRO3 protein tyrosine kinase 3
chr2	119631737	119632029	+	119630364	119632029	A5SS	0.2	50	50	ENSMUST00000028763.10	ENSMUSG00000027298.18	Tyro3	chr2	protein_coding	TYRO3 protein tyrosine kinase 3
chr2	119769267	119776653	+	119769267;119772326	119771703;119776653	ES	0.33	50	50	ENSMUST00000046717.13	ENSMUSG00000033943.16	Mga	chr2	protein_coding	MAX gene associated
chr2	119772326;119774986	119774891;119776653	+	119772326	119776653	cassetteExon	0.5	100	100	ENSMUST00000046717.13	ENSMUSG00000033943.16	Mga	chr2	protein_coding	MAX gene associated
chr2	119766147	119768973	+	119766147	119769120	A3SS	0.33	50	50	ENSMUST00000046717.13	ENSMUSG00000033943.16	Mga	chr2	protein_coding	MAX gene associated
chr2	119766147	119769064	+	119766147	119769120	A3SS	0.33	50	50	ENSMUST00000046717.13	ENSMUSG00000033943.16	Mga	chr2	protein_coding	MAX gene associated
chr2	119769267	119772210	+	119769267	119771703	A3SS	0.33	50	50	ENSMUST00000046717.13	ENSMUSG00000033943.16	Mga	chr2	protein_coding	MAX gene associated
chr2	119762412	119762985	+	119762415	119762985	A5SS	0.5	50	50	ENSMUST00000046717.13	ENSMUSG00000033943.16	Mga	chr2	protein_coding	MAX gene associated
chr2	119792318	119794173	+	119792451	119794173	A5SS	0.5	50	50	ENSMUST00000046717.13	ENSMUSG00000033943.16	Mga	chr2	protein_coding	MAX gene associated
chr2	119769267;119772326	119772210;119776653	+	119769267	119776653	cassetteExon	0.5	100	100	ENSMUST00000079934.12	ENSMUSG00000033943.16	Mga	chr2	protein_coding	MAX gene associated
chr2	119769267	119771703	+	119769267	119776653	A3SS	0.33	50	50	ENSMUST00000079934.12	ENSMUSG00000033943.16	Mga	chr2	protein_coding	MAX gene associated
chr2	119774986	119776653	+	119769267	119776653	A5SS	0.33	50	50	ENSMUST00000079934.12	ENSMUSG00000033943.16	Mga	chr2	protein_coding	MAX gene associated
chr2	119750388;119752323	119751847;119753909	+	119750388	119753909	cassetteExon	0.5	100	100	ENSMUST00000110773.9	ENSMUSG00000033943.16	Mga	chr2	protein_coding	MAX gene associated
chr2	119750388	119753909	+	119752323	119753909	5pMXE	0.5	50	50	ENSMUST00000150742.2	ENSMUSG00000033943.16	Mga	chr2	protein_coding	MAX gene associated
chr2	119766147	119769064	+	119766147	119768973	A3SS	0.33	50	50	ENSMUST00000132054.2	ENSMUSG00000033943.16	Mga	chr2	protein_coding	MAX gene associated
chr2	119769267	119776653	+	119772326	119776653	5pMXE	0.33	50	50	ENSMUST00000138851.8	ENSMUSG00000033943.16	Mga	chr2	protein_coding	MAX gene associated
chr2	119843575;119843799	119843782;119844100	+	119843575	119844100	cassetteExon	0.5	100	100	ENSMUST00000066058.8	ENSMUSG00000033902.13	Mapkbp1	chr2	protein_coding	mitogen-activated protein kinase binding protein 1
chr2	119858057	119860624	+	119858057	119860539	A3SS	0.5	50	50	ENSMUST00000044675.5	ENSMUSG00000098789.8	Jmjd7	chr2	protein_coding	jumonji domain containing 7
chr2	119861883	119861983	+	119861883	119862056	A3SS	0.5	50	50	ENSMUST00000044675.5	ENSMUSG00000098789.8	Jmjd7	chr2	protein_coding	jumonji domain containing 7
chr2	119858525	119860539	+	119858057	119860539	A5SS	0.5	50	50	ENSMUST00000044675.5	ENSMUSG00000098789.8	Jmjd7	chr2	protein_coding	jumonji domain containing 7
chr2	119861399	119861788	+	119861353	119861788	A5SS	0.5	50	50	ENSMUST00000044675.5	ENSMUSG00000098789.8	Jmjd7	chr2	protein_coding	jumonji domain containing 7
chr2	119858525	119860624	+	119858525	119860539	A3SS	0.5	50	50	ENSMUST00000135365.8	ENSMUSG00000098789.8	Jmjd7	chr2	protein_coding	jumonji domain containing 7
chr2	119862132	119865079	+	119862132	119862322	3pMXE	0.5	50	50	ENSMUST00000130176.8	ENSMUSG00000098789.8	Jmjd7	chr2	protein_coding	jumonji domain containing 7
chr2	119858525	119860624	+	119858057	119860624	A5SS	0.5	50	50	ENSMUST00000130176.8	ENSMUSG00000098789.8	Jmjd7	chr2	protein_coding	jumonji domain containing 7
chr2	119871125	119871876	+	119871125;119871788	119871602;119871876	ES	0.5	50	50	ENSMUST00000162393.8	ENSMUSG00000033852.17	Gm28042	chr2	protein_coding	predicted gene, 28042
chr2	119862946	119864959	+	119862946	119865055	A3SS	0.5	50	50	ENSMUST00000162393.8	ENSMUSG00000033852.17	Gm28042	chr2	protein_coding	predicted gene, 28042
chr2	119863987	119865055	+	119862946	119865055	A5SS	0.5	50	50	ENSMUST00000162393.8	ENSMUSG00000033852.17	Gm28042	chr2	protein_coding	predicted gene, 28042
chr2	119871125	119871876	+	119871788	119871876	5pMXE	0.5	50	50	ENSMUST00000130018.2	ENSMUSG00000098488.8	Pla2g4b	chr2	protein_coding	phospholipase A2, group IVB (cytosolic)
chr2	119952970	119958073	-	119932913	119958073	A3SS	0.5	50	50	ENSMUST00000028755.8	ENSMUSG00000027293.14	Ehd4	chr2	protein_coding	EH-domain containing 4
chr2	119958170	119960125	-	119958170	119967380	A5SS	0.5	50	50	ENSMUST00000028755.8	ENSMUSG00000027293.14	Ehd4	chr2	protein_coding	EH-domain containing 4
chr2	119967556	119967890	-	119967556	119984721	A5SS	0.5	50	50	ENSMUST00000028755.8	ENSMUSG00000027293.14	Ehd4	chr2	protein_coding	EH-domain containing 4
chr2	120020016	120021675	-	120020016	120021674	A5SS	0.5	50	50	ENSMUST00000136845.8	ENSMUSG00000050211.15	Pla2g4e	chr2	protein_coding	phospholipase A2, group IVE
chr2	120040404	120075167	-	120030766	120075167	A3SS	0.5	50	50	ENSMUST00000090071.5	ENSMUSG00000050211.15	Pla2g4e	chr2	protein_coding	phospholipase A2, group IVE
chr2	120030766	120037611	-	120030766	120075167	A5SS	0.5	50	50	ENSMUST00000090071.5	ENSMUSG00000050211.15	Pla2g4e	chr2	protein_coding	phospholipase A2, group IVE
chr2	120137844	120138044	-	120137841	120138044	A3SS	0.5	50	50	ENSMUST00000142183.2	ENSMUSG00000046971.8	Pla2g4f	chr2	protein_coding	phospholipase A2, group IVF
chr2	120141564	120141960	-	120138568	120141960	A3SS	0.5	50	50	ENSMUST00000142183.2	ENSMUSG00000046971.8	Pla2g4f	chr2	protein_coding	phospholipase A2, group IVF
chr2	120138568	120138686	-	120138568	120141960	A5SS	0.5	50	50	ENSMUST00000142183.2	ENSMUSG00000046971.8	Pla2g4f	chr2	protein_coding	phospholipase A2, group IVF
chr2	120172557	120174606	-	120172557;120173772	120173674;120174606	ES	0.5	50	50	ENSMUST00000028752.8	ENSMUSG00000027291.16	Vps39	chr2	protein_coding	VPS39 HOPS complex subunit
chr2	120176873;120177370	120177338;120180645	-	120176873	120180645	cassetteExon	0.5	100	100	ENSMUST00000028752.8	ENSMUSG00000027291.16	Vps39	chr2	protein_coding	VPS39 HOPS complex subunit
chr2	120176873;120179636	120179567;120180645	-	120176873	120180645	cassetteExon	0.5	100	100	ENSMUST00000028752.8	ENSMUSG00000027291.16	Vps39	chr2	protein_coding	VPS39 HOPS complex subunit
chr2	120180710;120182999	120182856;120183396	-	120180710	120183396	cassetteExon	0.5	100	100	ENSMUST00000028752.8	ENSMUSG00000027291.16	Vps39	chr2	protein_coding	VPS39 HOPS complex subunit
chr2	120156222	120156487	-	120156008	120156487	A3SS	0.5	50	50	ENSMUST00000028752.8	ENSMUSG00000027291.16	Vps39	chr2	protein_coding	VPS39 HOPS complex subunit
chr2	120179013	120180645	-	120176873	120180645	A3SS	0.25	50	50	ENSMUST00000028752.8	ENSMUSG00000027291.16	Vps39	chr2	protein_coding	VPS39 HOPS complex subunit
chr2	120176873;120179636	120179567;120180645	-	120176873;120177370	120177338;120180645	MXE	0.5	100	100	ENSMUST00000102501.10	ENSMUSG00000027291.16	Vps39	chr2	protein_coding	VPS39 HOPS complex subunit
chr2	120179013	120180645	-	120177370	120180645	A3SS	0.25	50	50	ENSMUST00000102501.10	ENSMUSG00000027291.16	Vps39	chr2	protein_coding	VPS39 HOPS complex subunit
chr2	120179013	120180645	-	120179636	120180645	A3SS&ES	0.25	50	50	ENSMUST00000129857.8	ENSMUSG00000027291.16	Vps39	chr2	protein_coding	VPS39 HOPS complex subunit
chr2	120172557	120174606	-	120173772	120174606	3pMXE	0.5	50	50	ENSMUST00000156296.8	ENSMUSG00000027291.16	Vps39	chr2	protein_coding	VPS39 HOPS complex subunit
chr2	120193421	120199725	-	120193421;120193916	120193843;120199725	ES	0.5	50	50	ENSMUST00000090042.12	ENSMUSG00000033808.17	Tmem87a	chr2	protein_coding	transmembrane protein 87A
chr2	120227928	120234386	-	120227928;120233251	120233191;120234386	ES	0.5	50	50	ENSMUST00000090042.12	ENSMUSG00000033808.17	Tmem87a	chr2	protein_coding	transmembrane protein 87A
chr2	120202113;120205040	120204969;120205900	-	120202113;120204460	120204392;120205900	MXE	0.5	100	100	ENSMUST00000090042.12	ENSMUSG00000033808.17	Tmem87a	chr2	protein_coding	transmembrane protein 87A
chr2	120190572	120193360	-	120190575	120193360	A3SS	0.5	50	50	ENSMUST00000090042.12	ENSMUSG00000033808.17	Tmem87a	chr2	protein_coding	transmembrane protein 87A
chr2	120193421	120199725	-	120193916	120199725	3pMXE	0.5	50	50	ENSMUST00000110729.2	ENSMUSG00000033808.17	Tmem87a	chr2	protein_coding	transmembrane protein 87A
chr2	120242024	120244718	+	120242024	120249839	A3SS	0.33	50	50	ENSMUST00000154574.8	ENSMUSG00000062646.13	Ganc	chr2	protein_coding	glucosidase, alpha; neutral C
chr2	120242024	120245550	+	120242024	120249839	A3SS	0.33	50	50	ENSMUST00000154574.8	ENSMUSG00000062646.13	Ganc	chr2	protein_coding	glucosidase, alpha; neutral C
chr2	120234750	120236747	+	120235540	120236747	A5SS	0.2	50	50	ENSMUST00000154574.8	ENSMUSG00000062646.13	Ganc	chr2	protein_coding	glucosidase, alpha; neutral C
chr2	120235125	120236747	+	120235540	120236747	A5SS	0.2	50	50	ENSMUST00000154574.8	ENSMUSG00000062646.13	Ganc	chr2	protein_coding	glucosidase, alpha; neutral C
chr2	120235140	120236747	+	120235540	120236747	A5SS	0.2	50	50	ENSMUST00000154574.8	ENSMUSG00000062646.13	Ganc	chr2	protein_coding	glucosidase, alpha; neutral C
chr2	120235889	120236747	+	120235540	120236747	A5SS	0.2	50	50	ENSMUST00000154574.8	ENSMUSG00000062646.13	Ganc	chr2	protein_coding	glucosidase, alpha; neutral C
chr2	120249921	120252506	+	120249966	120252506	A5SS	0.5	50	50	ENSMUST00000154574.8	ENSMUSG00000062646.13	Ganc	chr2	protein_coding	glucosidase, alpha; neutral C
chr2	120235125	120236747	+	120234750	120236747	A5SS	0.2	50	50	ENSMUST00000154963.8	ENSMUSG00000062646.13	Ganc	chr2	protein_coding	glucosidase, alpha; neutral C
chr2	120235140	120236747	+	120234750	120236747	A5SS	0.2	50	50	ENSMUST00000154963.8	ENSMUSG00000062646.13	Ganc	chr2	protein_coding	glucosidase, alpha; neutral C
chr2	120235889	120236747	+	120234750	120236747	A5SS	0.2	50	50	ENSMUST00000154963.8	ENSMUSG00000062646.13	Ganc	chr2	protein_coding	glucosidase, alpha; neutral C
chr2	120234750	120236747	+	120234750	120276846	A3SS	0.5	50	50	ENSMUST00000131523.8	ENSMUSG00000062646.13	Ganc	chr2	protein_coding	glucosidase, alpha; neutral C
chr2	120235140	120236747	+	120235125	120236747	A5SS	0.2	50	50	ENSMUST00000153660.8	ENSMUSG00000062646.13	Ganc	chr2	protein_coding	glucosidase, alpha; neutral C
chr2	120235889	120236747	+	120235125	120236747	A5SS	0.2	50	50	ENSMUST00000153660.8	ENSMUSG00000062646.13	Ganc	chr2	protein_coding	glucosidase, alpha; neutral C
chr2	120235140	120236747	+	120235889	120236747	A5SS	0.2	50	50	ENSMUST00000043755.14	ENSMUSG00000062646.13	Ganc	chr2	protein_coding	glucosidase, alpha; neutral C
chr2	120252732	120258211	+	120254225	120258211	A5SS&ES	0.5	50	50	ENSMUST00000043755.14	ENSMUSG00000062646.13	Ganc	chr2	protein_coding	glucosidase, alpha; neutral C
chr2	120253230	120254180	+	120252685	120254180	A5SS	0.5	50	50	ENSMUST00000043755.14	ENSMUSG00000062646.13	Ganc	chr2	protein_coding	glucosidase, alpha; neutral C
chr2	120242024	120244718	+	120242024	120245550	A3SS	0.33	50	50	ENSMUST00000143409.8	ENSMUSG00000062646.13	Ganc	chr2	protein_coding	glucosidase, alpha; neutral C
chr2	120315830;120316957	120316814;120318555	+	120315830	120318555	cassetteExon	0.5	100	100	ENSMUST00000145993.9	ENSMUSG00000118623.2	Gm52968	chr2	protein_coding	predicted gene, 52968
chr2	120325728;120326235	120325883;120326346	+	120325728	120326346	cassetteExon	0.5	100	100	ENSMUST00000145993.9	ENSMUSG00000118623.2	Gm52968	chr2	protein_coding	predicted gene, 52968
chr2	120327495;120331805	120331692;120332584	+	120327495	120332584	cassetteExon	0.5	100	100	ENSMUST00000145993.9	ENSMUSG00000118623.2	Gm52968	chr2	protein_coding	predicted gene, 52968
chr2	120327495;120331987	120331692;120332584	+	120327495	120332584	cassetteExon	0.5	100	100	ENSMUST00000145993.9	ENSMUSG00000118623.2	Gm52968	chr2	protein_coding	predicted gene, 52968
chr2	120327495;120332113	120331692;120332584	+	120327495	120332584	cassetteExon	0.5	100	100	ENSMUST00000145993.9	ENSMUSG00000118623.2	Gm52968	chr2	protein_coding	predicted gene, 52968
chr2	120327495	120329449	+	120327495	120332584	A3SS	0.33	50	50	ENSMUST00000145993.9	ENSMUSG00000118623.2	Gm52968	chr2	protein_coding	predicted gene, 52968
chr2	120294662	120311164	+	120290377	120311164	A5SS	0.33	50	50	ENSMUST00000145993.9	ENSMUSG00000118623.2	Gm52968	chr2	protein_coding	predicted gene, 52968
chr2	120307711	120311164	+	120290377	120311164	A5SS	0.33	50	50	ENSMUST00000145993.9	ENSMUSG00000118623.2	Gm52968	chr2	protein_coding	predicted gene, 52968
chr2	120314887	120314972	+	120312709	120314972	A5SS	0.5	50	50	ENSMUST00000145993.9	ENSMUSG00000118623.2	Gm52968	chr2	protein_coding	predicted gene, 52968
chr2	120321943	120322275	+	120321512	120322275	A5SS	0.5	50	50	ENSMUST00000145993.9	ENSMUSG00000118623.2	Gm52968	chr2	protein_coding	predicted gene, 52968
chr2	120327495	120331692	+	120327495;120329466	120329449;120331692	ES	0.33	50	50	ENSMUST00000028749.15	ENSMUSG00000079110.13	Capn3	chr2	protein_coding	calpain 3
chr2	120331805;120331987	120331977;120332584	+	120331805	120332584	cassetteExon	0.5	100	100	ENSMUST00000028749.15	ENSMUSG00000079110.13	Capn3	chr2	protein_coding	calpain 3
chr2	120331805;120332113	120331977;120332584	+	120331805	120332584	cassetteExon	0.5	100	100	ENSMUST00000028749.15	ENSMUSG00000079110.13	Capn3	chr2	protein_coding	calpain 3
chr2	120307711	120311164	+	120294662	120311164	A5SS	0.33	50	50	ENSMUST00000028749.15	ENSMUSG00000079110.13	Capn3	chr2	protein_coding	calpain 3
chr2	120330801	120331692	+	120329466	120331692	A5SS	0.33	50	50	ENSMUST00000028749.15	ENSMUSG00000079110.13	Capn3	chr2	protein_coding	calpain 3
chr2	120330801	120331692	+	120327495	120331692	A5SS	0.33	50	50	ENSMUST00000239364.2	ENSMUSG00000079110.13	Capn3	chr2	protein_coding	calpain 3
chr2	120331987	120332584	+	120332113	120332584	A5SS	0.25	50	50	ENSMUST00000239291.2	ENSMUSG00000079110.13	Capn3	chr2	protein_coding	calpain 3
chr2	120327495	120332584	+	120332113	120332584	5pMXE	0.25	50	50	ENSMUST00000141181.9	ENSMUSG00000079110.13	Capn3	chr2	protein_coding	calpain 3
chr2	120331805	120332584	+	120332113	120332584	A5SS	0.25	50	50	ENSMUST00000141181.9	ENSMUSG00000079110.13	Capn3	chr2	protein_coding	calpain 3
chr2	120327495	120332584	+	120331987	120332584	5pMXE	0.25	50	50	ENSMUST00000151342.3	ENSMUSG00000079110.13	Capn3	chr2	protein_coding	calpain 3
chr2	120331805	120332584	+	120331987	120332584	A5SS	0.25	50	50	ENSMUST00000151342.3	ENSMUSG00000079110.13	Capn3	chr2	protein_coding	calpain 3
chr2	120359110	120362076	-	120359110;120360998	120360929;120362076	ES	0.5	50	50	ENSMUST00000055241.13	ENSMUSG00000027288.17	Zfp106	chr2	protein_coding	zinc finger protein 106
chr2	120366160	120376324	-	120366160;120369973	120369776;120376324	ES	0.33	50	50	ENSMUST00000055241.13	ENSMUSG00000027288.17	Zfp106	chr2	protein_coding	zinc finger protein 106
chr2	120369973	120385712	-	120369973;120376385	120376324;120385712	ES	0.33	50	50	ENSMUST00000055241.13	ENSMUSG00000027288.17	Zfp106	chr2	protein_coding	zinc finger protein 106
chr2	120376382	120385712	-	120376385	120385712	A3SS	0.33	50	50	ENSMUST00000055241.13	ENSMUSG00000027288.17	Zfp106	chr2	protein_coding	zinc finger protein 106
chr2	120366160	120376324	-	120366160	120369776	5pMXE	0.5	50	50	ENSMUST00000171215.8	ENSMUSG00000027288.17	Zfp106	chr2	protein_coding	zinc finger protein 106
chr2	120369973	120385712	-	120369973;120376382	120376324;120385712	ES	0.33	50	50	ENSMUST00000141874.8	ENSMUSG00000027288.17	Zfp106	chr2	protein_coding	zinc finger protein 106
chr2	120366160	120376324	-	120362703	120376324	A3SS	0.33	50	50	ENSMUST00000135625.8	ENSMUSG00000027288.17	Zfp106	chr2	protein_coding	zinc finger protein 106
chr2	120369973	120376324	-	120362703	120376324	A3SS	0.33	50	50	ENSMUST00000135625.8	ENSMUSG00000027288.17	Zfp106	chr2	protein_coding	zinc finger protein 106
chr2	120369973	120385712	-	120376385	120385712	A3SS&ES	0.33	50	50	ENSMUST00000135625.8	ENSMUSG00000027288.17	Zfp106	chr2	protein_coding	zinc finger protein 106
chr2	120362703	120363992	-	120362703	120376324	A5SS	0.5	50	50	ENSMUST00000135625.8	ENSMUSG00000027288.17	Zfp106	chr2	protein_coding	zinc finger protein 106
chr2	120366160;120369973	120369776;120385712	-	120366160;120376385	120376324;120385712	MXE	0.5	100	100	ENSMUST00000167241.2	ENSMUSG00000027288.17	Zfp106	chr2	protein_coding	zinc finger protein 106
chr2	120366160;120376382	120376324;120385712	-	120366160;120369973	120369776;120385712	MXE	0.5	100	100	ENSMUST00000147353.2	ENSMUSG00000027288.17	Zfp106	chr2	protein_coding	zinc finger protein 106
chr2	120398287;120398686	120398530;120414750	+	120398287	120414750	cassetteExon	0.5	100	100	ENSMUST00000110711.9	ENSMUSG00000027287.15	Snap23	chr2	protein_coding	synaptosomal-associated protein 23
chr2	120398287;120399863	120399764;120414750	+	120398287	120414750	cassetteExon	0.5	100	100	ENSMUST00000110711.9	ENSMUSG00000027287.15	Snap23	chr2	protein_coding	synaptosomal-associated protein 23
chr2	120416757;120421176	120421144;120425282	+	120416757	120425282	cassetteExon	0.5	100	100	ENSMUST00000110711.9	ENSMUSG00000027287.15	Snap23	chr2	protein_coding	synaptosomal-associated protein 23
chr2	120416757;120421395	120421144;120425282	+	120416757	120425282	cassetteExon	0.5	100	100	ENSMUST00000110711.9	ENSMUSG00000027287.15	Snap23	chr2	protein_coding	synaptosomal-associated protein 23
chr2	120416757;120421395	120421303;120425282	+	120416757	120425282	cassetteExon	0.5	100	100	ENSMUST00000110711.9	ENSMUSG00000027287.15	Snap23	chr2	protein_coding	synaptosomal-associated protein 23
chr2	120398242	120414750	+	120398287	120414750	A5SS	0.25	50	50	ENSMUST00000110711.9	ENSMUSG00000027287.15	Snap23	chr2	protein_coding	synaptosomal-associated protein 23
chr2	120421098	120425282	+	120416757	120425282	A5SS	0.25	50	50	ENSMUST00000110711.9	ENSMUSG00000027287.15	Snap23	chr2	protein_coding	synaptosomal-associated protein 23
chr2	120398686	120414750	+	120398242	120414750	A5SS	0.25	50	50	ENSMUST00000028743.10	ENSMUSG00000027287.15	Snap23	chr2	protein_coding	synaptosomal-associated protein 23
chr2	120399863	120414750	+	120398242	120414750	A5SS	0.25	50	50	ENSMUST00000028743.10	ENSMUSG00000027287.15	Snap23	chr2	protein_coding	synaptosomal-associated protein 23
chr2	120416757;120421395	120421303;120425282	+	120416757;120421176	120421144;120425282	MXE	0.5	100	100	ENSMUST00000116437.8	ENSMUSG00000027287.15	Snap23	chr2	protein_coding	synaptosomal-associated protein 23
chr2	120421098	120425282	+	120421176	120425282	A5SS&ES	0.25	50	50	ENSMUST00000116437.8	ENSMUSG00000027287.15	Snap23	chr2	protein_coding	synaptosomal-associated protein 23
chr2	120421098	120425282	+	120421395	120425282	A5SS&ES	0.25	50	50	ENSMUST00000150611.8	ENSMUSG00000027287.15	Snap23	chr2	protein_coding	synaptosomal-associated protein 23
chr2	120398287;120398686	120398530;120414750	+	120398287;120399863	120399764;120414750	MXE	0.5	100	100	ENSMUST00000153580.8	ENSMUSG00000027287.15	Snap23	chr2	protein_coding	synaptosomal-associated protein 23
chr2	120435579	120436429	-	120435739	120436429	A3SS	0.5	50	50	ENSMUST00000102496.8	ENSMUSG00000027286.17	Lrrc57	chr2	protein_coding	leucine rich repeat containing 57
chr2	120439504	120439596	-	120439504	120439670	A5SS	0.25	50	50	ENSMUST00000102496.8	ENSMUSG00000027286.17	Lrrc57	chr2	protein_coding	leucine rich repeat containing 57
chr2	120439504	120439755	-	120439504	120439670	A5SS	0.25	50	50	ENSMUST00000102496.8	ENSMUSG00000027286.17	Lrrc57	chr2	protein_coding	leucine rich repeat containing 57
chr2	120439504	120439762	-	120439504	120439670	A5SS	0.25	50	50	ENSMUST00000102496.8	ENSMUSG00000027286.17	Lrrc57	chr2	protein_coding	leucine rich repeat containing 57
chr2	120439504	120439755	-	120439504	120439596	A5SS	0.25	50	50	ENSMUST00000102497.10	ENSMUSG00000027286.17	Lrrc57	chr2	protein_coding	leucine rich repeat containing 57
chr2	120439504	120439762	-	120439504	120439596	A5SS	0.25	50	50	ENSMUST00000102497.10	ENSMUSG00000027286.17	Lrrc57	chr2	protein_coding	leucine rich repeat containing 57
chr2	120439504	120439755	-	120439504	120439762	A5SS	0.25	50	50	ENSMUST00000102499.8	ENSMUSG00000027286.17	Lrrc57	chr2	protein_coding	leucine rich repeat containing 57
chr2	120442911;120443601	120443532;120446336	+	120442911	120446336	cassetteExon	0.5	100	100	ENSMUST00000028741.14	ENSMUSG00000027285.14	Haus2	chr2	protein_coding	HAUS augmin-like complex, subunit 2
chr2	120440139	120442819	+	120440026	120442819	A5SS	0.5	50	50	ENSMUST00000028741.14	ENSMUSG00000027285.14	Haus2	chr2	protein_coding	HAUS augmin-like complex, subunit 2
chr2	120513282	120514154	+	120513282	120515337	A3SS	0.5	50	50	ENSMUST00000180041.9	ENSMUSG00000033705.18	Stard9	chr2	protein_coding	START domain containing 9
chr2	120515199	120515337	+	120513282	120515337	A5SS	0.5	50	50	ENSMUST00000180041.9	ENSMUSG00000033705.18	Stard9	chr2	protein_coding	START domain containing 9
chr2	120534160	120536150	+	120536061	120536150	A5SS	0.5	50	50	ENSMUST00000180041.9	ENSMUSG00000033705.18	Stard9	chr2	protein_coding	START domain containing 9
chr2	120557957	120558213	+	120557957	120560195	A3SS	0.5	50	50	ENSMUST00000154193.8	ENSMUSG00000033705.18	Stard9	chr2	protein_coding	START domain containing 9
chr2	120551470	120553091	-	120551491	120553091	A3SS	0.5	50	50	ENSMUST00000110701.8	ENSMUSG00000027284.17	Cdan1	chr2	protein_coding	congenital dyserythropoietic anemia, type I (human)
chr2	120560983	120561183	-	120560986	120561183	A3SS	0.5	50	50	ENSMUST00000110701.8	ENSMUSG00000027284.17	Cdan1	chr2	protein_coding	congenital dyserythropoietic anemia, type I (human)
chr2	120549408	120550884	-	120549408	120549622	A5SS&ES	0.5	50	50	ENSMUST00000110701.8	ENSMUSG00000027284.17	Cdan1	chr2	protein_coding	congenital dyserythropoietic anemia, type I (human)
chr2	120560580	120560950	-	120560580	120560780	A5SS	0.5	50	50	ENSMUST00000110701.8	ENSMUSG00000027284.17	Cdan1	chr2	protein_coding	congenital dyserythropoietic anemia, type I (human)
chr2	120551470	120553138	-	120551470	120553091	A5SS	0.5	50	50	ENSMUST00000110700.2	ENSMUSG00000027284.17	Cdan1	chr2	protein_coding	congenital dyserythropoietic anemia, type I (human)
chr2	120608080	120616460	-	120608080;120614280	120614176;120616460	ES	0.5	50	50	ENSMUST00000148285.8	ENSMUSG00000027284.17	Cdan1	chr2	protein_coding	congenital dyserythropoietic anemia, type I (human)
chr2	120653089;120655796	120655723;120680537	-	120653089	120680537	cassetteExon	0.5	100	100	ENSMUST00000148285.8	ENSMUSG00000027284.17	Cdan1	chr2	protein_coding	congenital dyserythropoietic anemia, type I (human)
chr2	120570675	120575500	-	120562224	120575500	A3SS	0.5	50	50	ENSMUST00000148285.8	ENSMUSG00000027284.17	Cdan1	chr2	protein_coding	congenital dyserythropoietic anemia, type I (human)
chr2	120667741	120680537	-	120653089	120680537	A3SS	0.33	50	50	ENSMUST00000148285.8	ENSMUSG00000027284.17	Cdan1	chr2	protein_coding	congenital dyserythropoietic anemia, type I (human)
chr2	120655796	120680949	-	120655796	120680537	5pMXE	0.33	50	50	ENSMUST00000085840.11	ENSMUSG00000090100.8	Ttbk2	chr2	protein_coding	tau tubulin kinase 2
chr2	120655796;120667741	120667646;120680537	-	120655796	120680537	cassetteExon	0.5	100	100	ENSMUST00000085840.11	ENSMUSG00000090100.8	Ttbk2	chr2	protein_coding	tau tubulin kinase 2
chr2	120653089	120680537	-	120653089	120655723	A5SS&ES	0.5	50	50	ENSMUST00000028740.11	ENSMUSG00000090100.8	Ttbk2	chr2	protein_coding	tau tubulin kinase 2
chr2	120655796	120667646	-	120655796	120680949	A5SS	0.33	50	50	ENSMUST00000028740.11	ENSMUSG00000090100.8	Ttbk2	chr2	protein_coding	tau tubulin kinase 2
chr2	120693899;120694325	120694221;120696811	+	120693899	120696811	cassetteExon	0.5	100	100	ENSMUST00000133643.8	ENSMUSG00000087519.9	AV039307	chr2	lncRNA	expressed sequence AV039307
chr2	120681740	120693775	+	120692805	120693775	A5SS&ES	0.5	50	50	ENSMUST00000133643.8	ENSMUSG00000087519.9	AV039307	chr2	lncRNA	expressed sequence AV039307
chr2	120734680	120739903	-	120734680;120737506	120737325;120739903	ES	0.5	50	50	ENSMUST00000028728.6	ENSMUSG00000027272.6	Ubr1	chr2	protein_coding	ubiquitin protein ligase E3 component n-recognin 1
chr2	120701526	120701813	-	120701526	120703605	A5SS	0.5	50	50	ENSMUST00000028728.6	ENSMUSG00000027272.6	Ubr1	chr2	protein_coding	ubiquitin protein ligase E3 component n-recognin 1
chr2	120817188	120817397	+	120817188	120817317	A3SS	0.5	50	50	ENSMUST00000067582.14	ENSMUSG00000054484.15	Tmem62	chr2	protein_coding	transmembrane protein 62
chr2	120811609	120814815	+	120810999	120814815	A5SS	0.5	50	50	ENSMUST00000067582.14	ENSMUSG00000054484.15	Tmem62	chr2	protein_coding	transmembrane protein 62
chr2	120817439	120820812	+	120817439	120826887	A3SS	0.5	50	50	ENSMUST00000139428.8	ENSMUSG00000054484.15	Tmem62	chr2	protein_coding	transmembrane protein 62
chr2	120824118	120826887	+	120817439	120826887	A5SS	0.5	50	50	ENSMUST00000139428.8	ENSMUSG00000054484.15	Tmem62	chr2	protein_coding	transmembrane protein 62
chr2	120844499	120844994	+	120844499	120846612	A3SS	0.5	50	50	ENSMUST00000060455.15	ENSMUSG00000023572.17	Ccndbp1	chr2	protein_coding	cyclin D-type binding-protein 1
chr2	120842039	120842164	+	120842011	120842164	A5SS	0.5	50	50	ENSMUST00000060455.15	ENSMUSG00000023572.17	Ccndbp1	chr2	protein_coding	cyclin D-type binding-protein 1
chr2	120843079	120843180	+	120842910	120843180	A5SS	0.5	50	50	ENSMUST00000060455.15	ENSMUSG00000023572.17	Ccndbp1	chr2	protein_coding	cyclin D-type binding-protein 1
chr2	120865079;120865929	120865692;120867065	-	120865079	120867065	cassetteExon	0.5	100	100	ENSMUST00000102490.10	ENSMUSG00000023216.14	Epb42	chr2	protein_coding	erythrocyte membrane protein band 4.2
chr2	120852373	120853223	-	120852373	120854966	A5SS	0.5	50	50	ENSMUST00000102490.10	ENSMUSG00000023216.14	Epb42	chr2	protein_coding	erythrocyte membrane protein band 4.2
chr2	120972784	120973630	+	120972784;120973135	120973005;120973630	ES	0.5	50	50	ENSMUST00000130221.8	ENSMUSG00000027259.16	Adal	chr2	protein_coding	adenosine deaminase-like
chr2	120971090	120972574	+	120971147	120972574	A5SS	0.5	50	50	ENSMUST00000130221.8	ENSMUSG00000027259.16	Adal	chr2	protein_coding	adenosine deaminase-like
chr2	120976601	120980701	+	120976601;120978803	120978722;120980701	ES	0.25	50	50	ENSMUST00000028702.10	ENSMUSG00000027259.16	Adal	chr2	protein_coding	adenosine deaminase-like
chr2	120983049;120985083	120984976;120985200	+	120983049	120985200	cassetteExon	0.5	100	100	ENSMUST00000028702.10	ENSMUSG00000027259.16	Adal	chr2	protein_coding	adenosine deaminase-like
chr2	120973703	120980701	+	120978803	120980701	A5SS&ES	0.25	50	50	ENSMUST00000028702.10	ENSMUSG00000027259.16	Adal	chr2	protein_coding	adenosine deaminase-like
chr2	120973690	120980701	+	120973703	120980701	A5SS	0.25	50	50	ENSMUST00000110665.8	ENSMUSG00000027259.16	Adal	chr2	protein_coding	adenosine deaminase-like
chr2	120976601	120980701	+	120973703	120980701	A5SS	0.25	50	50	ENSMUST00000110665.8	ENSMUSG00000027259.16	Adal	chr2	protein_coding	adenosine deaminase-like
chr2	120973690;120976601	120976514;120980701	+	120973690	120980701	cassetteExon	0.5	100	100	ENSMUST00000147271.8	ENSMUSG00000027259.16	Adal	chr2	protein_coding	adenosine deaminase-like
chr2	120978803	120980701	+	120973690	120980701	A5SS	0.25	50	50	ENSMUST00000147271.8	ENSMUSG00000027259.16	Adal	chr2	protein_coding	adenosine deaminase-like
chr2	120997199	121000291	-	120997199;120999884	120999680;121000291	ES	0.5	50	50	ENSMUST00000110661.9	ENSMUSG00000050619.15	Zscan29	chr2	protein_coding	zinc finger SCAN domains 29
chr2	120994683;120995326	120995222;120996525	-	120994683	120996525	cassetteExon	0.5	100	100	ENSMUST00000110661.9	ENSMUSG00000050619.15	Zscan29	chr2	protein_coding	zinc finger SCAN domains 29
chr2	120992030	120994427	-	120992030	120994228	A5SS	0.5	50	50	ENSMUST00000110661.9	ENSMUSG00000050619.15	Zscan29	chr2	protein_coding	zinc finger SCAN domains 29
chr2	121005943	121007009	+	121005943;121006305	121006252;121007009	ES	0.5	50	50	ENSMUST00000144123.8	ENSMUSG00000027263.13	Tubgcp4	chr2	protein_coding	tubulin, gamma complex associated protein 4
chr2	121001952	121004039	+	121001191	121004039	A5SS	0.33	50	50	ENSMUST00000144123.8	ENSMUSG00000027263.13	Tubgcp4	chr2	protein_coding	tubulin, gamma complex associated protein 4
chr2	121002408	121004039	+	121001191	121004039	A5SS	0.33	50	50	ENSMUST00000144123.8	ENSMUSG00000027263.13	Tubgcp4	chr2	protein_coding	tubulin, gamma complex associated protein 4
chr2	121019950	121020305	+	121019950	121020308	A3SS	0.5	50	50	ENSMUST00000110658.8	ENSMUSG00000027263.13	Tubgcp4	chr2	protein_coding	tubulin, gamma complex associated protein 4
chr2	121002408	121004039	+	121001952	121004039	A5SS	0.33	50	50	ENSMUST00000110658.8	ENSMUSG00000027263.13	Tubgcp4	chr2	protein_coding	tubulin, gamma complex associated protein 4
chr2	121005943	121007009	+	121005943	121006252	3pMXE	0.33	50	50	ENSMUST00000130929.8	ENSMUSG00000027263.13	Tubgcp4	chr2	protein_coding	tubulin, gamma complex associated protein 4
chr2	121005943	121009151	+	121005943	121006252	3pMXE	0.33	50	50	ENSMUST00000130929.8	ENSMUSG00000027263.13	Tubgcp4	chr2	protein_coding	tubulin, gamma complex associated protein 4
chr2	121005943;121007065	121007009;121009151	+	121005943	121009151	cassetteExon	0.5	100	100	ENSMUST00000133773.8	ENSMUSG00000027263.13	Tubgcp4	chr2	protein_coding	tubulin, gamma complex associated protein 4
chr2	121038610	121039562	-	121038610;121038985	121038836;121039562	ES	0.5	50	50	ENSMUST00000135890.8	ENSMUSG00000043909.17	Trp53bp1	chr2	protein_coding	transformation related protein 53 binding protein 1
chr2	121041903	121046148	-	121041903	121042281	5pMXE	0.33	50	50	ENSMUST00000135890.8	ENSMUSG00000043909.17	Trp53bp1	chr2	protein_coding	transformation related protein 53 binding protein 1
chr2	121041903	121051639	-	121041903	121042281	5pMXE	0.33	50	50	ENSMUST00000135890.8	ENSMUSG00000043909.17	Trp53bp1	chr2	protein_coding	transformation related protein 53 binding protein 1
chr2	121033239;121033933	121033874;121034814	-	121033239	121034814	cassetteExon	0.5	100	100	ENSMUST00000135890.8	ENSMUSG00000043909.17	Trp53bp1	chr2	protein_coding	transformation related protein 53 binding protein 1
chr2	121029088	121029457	-	121024066	121029457	A3SS	0.5	50	50	ENSMUST00000135890.8	ENSMUSG00000043909.17	Trp53bp1	chr2	protein_coding	transformation related protein 53 binding protein 1
chr2	121033233	121034814	-	121033239	121034814	A3SS	0.33	50	50	ENSMUST00000135890.8	ENSMUSG00000043909.17	Trp53bp1	chr2	protein_coding	transformation related protein 53 binding protein 1
chr2	121041903	121051639	-	121041903;121046652	121046148;121051639	ES	0.5	50	50	ENSMUST00000110647.8	ENSMUSG00000043909.17	Trp53bp1	chr2	protein_coding	transformation related protein 53 binding protein 1
chr2	121058329	121066054	-	121058329;121059188	121059069;121066054	ES	0.33	50	50	ENSMUST00000110647.8	ENSMUSG00000043909.17	Trp53bp1	chr2	protein_coding	transformation related protein 53 binding protein 1
chr2	121100469	121101005	-	121100469;121100790	121100700;121101005	ES	0.5	50	50	ENSMUST00000110647.8	ENSMUSG00000043909.17	Trp53bp1	chr2	protein_coding	transformation related protein 53 binding protein 1
chr2	121058329;121058643	121058503;121059069	-	121058329	121059069	cassetteExon	0.5	100	100	ENSMUST00000110647.8	ENSMUSG00000043909.17	Trp53bp1	chr2	protein_coding	transformation related protein 53 binding protein 1
chr2	121078771;121081595	121081458;121082349	-	121078771	121082349	cassetteExon	0.5	100	100	ENSMUST00000110647.8	ENSMUSG00000043909.17	Trp53bp1	chr2	protein_coding	transformation related protein 53 binding protein 1
chr2	121062740	121066054	-	121059188	121066054	A3SS	0.33	50	50	ENSMUST00000110647.8	ENSMUSG00000043909.17	Trp53bp1	chr2	protein_coding	transformation related protein 53 binding protein 1
chr2	121046652	121048867	-	121046652	121051639	A5SS	0.5	50	50	ENSMUST00000110647.8	ENSMUSG00000043909.17	Trp53bp1	chr2	protein_coding	transformation related protein 53 binding protein 1
chr2	121033933	121034814	-	121033233	121034814	A3SS	0.33	50	50	ENSMUST00000147554.2	ENSMUSG00000043909.17	Trp53bp1	chr2	protein_coding	transformation related protein 53 binding protein 1
chr2	121038610	121039562	-	121038610	121038836	5pMXE	0.5	50	50	ENSMUST00000132812.2	ENSMUSG00000043909.17	Trp53bp1	chr2	protein_coding	transformation related protein 53 binding protein 1
chr2	121038610	121039562	-	121038985	121039562	3pMXE	0.5	50	50	ENSMUST00000124554.2	ENSMUSG00000043909.17	Trp53bp1	chr2	protein_coding	transformation related protein 53 binding protein 1
chr2	121046652	121051639	-	121041903	121051639	A3SS	0.5	50	50	ENSMUST00000124554.2	ENSMUSG00000043909.17	Trp53bp1	chr2	protein_coding	transformation related protein 53 binding protein 1
chr2	121041903	121046148	-	121041903	121051639	A5SS	0.33	50	50	ENSMUST00000124554.2	ENSMUSG00000043909.17	Trp53bp1	chr2	protein_coding	transformation related protein 53 binding protein 1
chr2	121062740	121066054	-	121058329	121066054	A3SS	0.33	50	50	ENSMUST00000131245.2	ENSMUSG00000043909.17	Trp53bp1	chr2	protein_coding	transformation related protein 53 binding protein 1
chr2	121058329	121058503	-	121058329	121066054	A5SS	0.33	50	50	ENSMUST00000131245.2	ENSMUSG00000043909.17	Trp53bp1	chr2	protein_coding	transformation related protein 53 binding protein 1
chr2	121058329	121066054	-	121059188	121066054	3pMXE	0.33	50	50	ENSMUST00000142400.2	ENSMUSG00000043909.17	Trp53bp1	chr2	protein_coding	transformation related protein 53 binding protein 1
chr2	121100469	121101005	-	121100469	121100700	5pMXE	0.5	50	50	ENSMUST00000131426.2	ENSMUSG00000043909.17	Trp53bp1	chr2	protein_coding	transformation related protein 53 binding protein 1
chr2	121129527	121137996	+	121129527;121137853	121129750;121137996	ES	0.5	50	50	ENSMUST00000094639.10	ENSMUSG00000027254.14	Map1a	chr2	protein_coding	microtubule-associated protein 1 A
chr2	121126023	121129078	+	121121302	121129078	A5SS	0.5	50	50	ENSMUST00000094639.10	ENSMUSG00000027254.14	Map1a	chr2	protein_coding	microtubule-associated protein 1 A
chr2	121129527	121129750	+	121129527	121137996	A3SS	0.5	50	50	ENSMUST00000133283.2	ENSMUSG00000027254.14	Map1a	chr2	protein_coding	microtubule-associated protein 1 A
chr2	121137853	121137996	+	121129527	121137996	A5SS	0.5	50	50	ENSMUST00000133283.2	ENSMUSG00000027254.14	Map1a	chr2	protein_coding	microtubule-associated protein 1 A
chr2	121152273	121158126	-	121152273;121157395	121157333;121158126	ES	0.33	50	50	ENSMUST00000052029.10	ENSMUSG00000033526.17	Ppip5k1	chr2	protein_coding	diphosphoinositol pentakisphosphate kinase 1
chr2	121152273;121153857	121153675;121158126	-	121152273;121157395	121157333;121158126	MXE	0.5	100	100	ENSMUST00000052029.10	ENSMUSG00000033526.17	Ppip5k1	chr2	protein_coding	diphosphoinositol pentakisphosphate kinase 1
chr2	121162129;121162872	121162723;121164894	-	121162129	121164894	cassetteExon	0.5	100	100	ENSMUST00000052029.10	ENSMUSG00000033526.17	Ppip5k1	chr2	protein_coding	diphosphoinositol pentakisphosphate kinase 1
chr2	121167261	121167564	-	121167321	121167564	A3SS	0.5	50	50	ENSMUST00000052029.10	ENSMUSG00000033526.17	Ppip5k1	chr2	protein_coding	diphosphoinositol pentakisphosphate kinase 1
chr2	121178164	121178948	-	121178123	121178948	A3SS	0.5	50	50	ENSMUST00000052029.10	ENSMUSG00000033526.17	Ppip5k1	chr2	protein_coding	diphosphoinositol pentakisphosphate kinase 1
chr2	121181132	121181398	-	121181130	121181398	A3SS	0.5	50	50	ENSMUST00000052029.10	ENSMUSG00000033526.17	Ppip5k1	chr2	protein_coding	diphosphoinositol pentakisphosphate kinase 1
chr2	121167321	121167588	-	121167321	121167564	A5SS	0.5	50	50	ENSMUST00000052029.10	ENSMUSG00000033526.17	Ppip5k1	chr2	protein_coding	diphosphoinositol pentakisphosphate kinase 1
chr2	121181132;121181494	121181398;121185782	-	121181132	121185782	cassetteExon	0.5	100	100	ENSMUST00000110628.8	ENSMUSG00000033526.17	Ppip5k1	chr2	protein_coding	diphosphoinositol pentakisphosphate kinase 1
chr2	121181222	121185782	-	121181132	121185782	A3SS	0.33	50	50	ENSMUST00000110628.8	ENSMUSG00000033526.17	Ppip5k1	chr2	protein_coding	diphosphoinositol pentakisphosphate kinase 1
chr2	121152273	121162039	-	121152273;121158251	121158126;121162039	ES	0.5	50	50	ENSMUST00000110627.8	ENSMUSG00000033526.17	Ppip5k1	chr2	protein_coding	diphosphoinositol pentakisphosphate kinase 1
chr2	121152273;121153857	121153675;121158126	-	121152273	121158126	cassetteExon	0.5	100	100	ENSMUST00000110627.8	ENSMUSG00000033526.17	Ppip5k1	chr2	protein_coding	diphosphoinositol pentakisphosphate kinase 1
chr2	121181494	121185782	-	121181222	121185782	A3SS	0.33	50	50	ENSMUST00000110627.8	ENSMUSG00000033526.17	Ppip5k1	chr2	protein_coding	diphosphoinositol pentakisphosphate kinase 1
chr2	121181132	121185782	-	121181132	121181398	5pMXE	0.5	50	50	ENSMUST00000110626.8	ENSMUSG00000033526.17	Ppip5k1	chr2	protein_coding	diphosphoinositol pentakisphosphate kinase 1
chr2	121181494	121185497	-	121181494	121185782	A5SS	0.33	50	50	ENSMUST00000110625.8	ENSMUSG00000033526.17	Ppip5k1	chr2	protein_coding	diphosphoinositol pentakisphosphate kinase 1
chr2	121181494	121185517	-	121181494	121185782	A5SS	0.33	50	50	ENSMUST00000110625.8	ENSMUSG00000033526.17	Ppip5k1	chr2	protein_coding	diphosphoinositol pentakisphosphate kinase 1
chr2	121152273	121153675	-	121152273	121162039	A5SS	0.25	50	50	ENSMUST00000132114.8	ENSMUSG00000033526.17	Ppip5k1	chr2	protein_coding	diphosphoinositol pentakisphosphate kinase 1
chr2	121152273	121157333	-	121152273	121162039	A5SS	0.25	50	50	ENSMUST00000132114.8	ENSMUSG00000033526.17	Ppip5k1	chr2	protein_coding	diphosphoinositol pentakisphosphate kinase 1
chr2	121152273	121162039	-	121158251	121162039	3pMXE	0.5	50	50	ENSMUST00000155568.3	ENSMUSG00000033526.17	Ppip5k1	chr2	protein_coding	diphosphoinositol pentakisphosphate kinase 1
chr2	121162129	121164894	-	121162872	121164894	3pMXE	0.5	50	50	ENSMUST00000134644.8	ENSMUSG00000033526.17	Ppip5k1	chr2	protein_coding	diphosphoinositol pentakisphosphate kinase 1
chr2	121181494	121185497	-	121181494	121185517	A5SS	0.33	50	50	ENSMUST00000134644.8	ENSMUSG00000033526.17	Ppip5k1	chr2	protein_coding	diphosphoinositol pentakisphosphate kinase 1
chr2	121189482	121190426	+	121189482;121190258	121190060;121190426	ES	0.5	50	50	ENSMUST00000125812.8	ENSMUSG00000000308.15	Ckmt1	chr2	protein_coding	creatine kinase, mitochondrial 1, ubiquitous
chr2	121188429	121189226	+	121188429	121189163	A3SS	0.33	50	50	ENSMUST00000125812.8	ENSMUSG00000000308.15	Ckmt1	chr2	protein_coding	creatine kinase, mitochondrial 1, ubiquitous
chr2	121188429	121189277	+	121188429	121189163	A3SS	0.33	50	50	ENSMUST00000125812.8	ENSMUSG00000000308.15	Ckmt1	chr2	protein_coding	creatine kinase, mitochondrial 1, ubiquitous
chr2	121189482	121189797	+	121189482	121190060	A3SS	0.25	50	50	ENSMUST00000125812.8	ENSMUSG00000000308.15	Ckmt1	chr2	protein_coding	creatine kinase, mitochondrial 1, ubiquitous
chr2	121189482	121189967	+	121189482	121190060	A3SS	0.25	50	50	ENSMUST00000125812.8	ENSMUSG00000000308.15	Ckmt1	chr2	protein_coding	creatine kinase, mitochondrial 1, ubiquitous
chr2	121190521	121191081	+	121190521	121191037	A3SS	0.5	50	50	ENSMUST00000078222.9	ENSMUSG00000000308.15	Ckmt1	chr2	protein_coding	creatine kinase, mitochondrial 1, ubiquitous
chr2	121188429	121189277	+	121188340	121189277	A5SS	0.5	50	50	ENSMUST00000078222.9	ENSMUSG00000000308.15	Ckmt1	chr2	protein_coding	creatine kinase, mitochondrial 1, ubiquitous
chr2	121189482	121190426	+	121189482	121190060	3pMXE	0.25	50	50	ENSMUST00000125221.3	ENSMUSG00000000308.15	Ckmt1	chr2	protein_coding	creatine kinase, mitochondrial 1, ubiquitous
chr2	121188429	121189277	+	121188429	121189226	A3SS	0.33	50	50	ENSMUST00000125221.3	ENSMUSG00000000308.15	Ckmt1	chr2	protein_coding	creatine kinase, mitochondrial 1, ubiquitous
chr2	121189482;121190258	121189797;121190426	+	121189482	121190426	cassetteExon	0.5	100	100	ENSMUST00000126130.2	ENSMUSG00000000308.15	Ckmt1	chr2	protein_coding	creatine kinase, mitochondrial 1, ubiquitous
chr2	121189482;121190258	121189967;121190426	+	121189482	121190426	cassetteExon	0.5	100	100	ENSMUST00000126130.2	ENSMUSG00000000308.15	Ckmt1	chr2	protein_coding	creatine kinase, mitochondrial 1, ubiquitous
chr2	121189482	121189797	+	121189482	121189967	A3SS	0.25	50	50	ENSMUST00000129130.3	ENSMUSG00000000308.15	Ckmt1	chr2	protein_coding	creatine kinase, mitochondrial 1, ubiquitous
chr2	121204213	121205139	-	121204213;121204892	121204760;121205139	ES	0.5	50	50	ENSMUST00000038389.15	ENSMUSG00000033498.15	Strc	chr2	protein_coding	stereocilin
chr2	121210263	121217524	-	121210263	121211286	5pMXE	0.5	50	50	ENSMUST00000038389.15	ENSMUSG00000033498.15	Strc	chr2	protein_coding	stereocilin
chr2	121204213	121205147	-	121204213	121204760	A5SS&ES	0.25	50	50	ENSMUST00000038389.15	ENSMUSG00000033498.15	Strc	chr2	protein_coding	stereocilin
chr2	121209391	121210024	-	121209391	121209478	A5SS	0.5	50	50	ENSMUST00000038389.15	ENSMUSG00000033498.15	Strc	chr2	protein_coding	stereocilin
chr2	121204213	121205354	-	121204213;121205254	121205139;121205354	ES	0.5	50	50	ENSMUST00000129136.8	ENSMUSG00000033498.15	Strc	chr2	protein_coding	stereocilin
chr2	121203567	121203742	-	121202266	121203742	A3SS	0.5	50	50	ENSMUST00000129136.8	ENSMUSG00000033498.15	Strc	chr2	protein_coding	stereocilin
chr2	121202266	121202564	-	121202266	121203742	A5SS	0.5	50	50	ENSMUST00000129136.8	ENSMUSG00000033498.15	Strc	chr2	protein_coding	stereocilin
chr2	121204213	121205147	-	121204213	121205139	A5SS	0.25	50	50	ENSMUST00000129136.8	ENSMUSG00000033498.15	Strc	chr2	protein_coding	stereocilin
chr2	121204213;121205254	121204760;121205354	-	121204213	121205354	cassetteExon	0.5	100	100	ENSMUST00000134443.8	ENSMUSG00000033498.15	Strc	chr2	protein_coding	stereocilin
chr2	121204213;121205254	121205147;121205354	-	121204213	121205354	cassetteExon	0.5	100	100	ENSMUST00000134443.8	ENSMUSG00000033498.15	Strc	chr2	protein_coding	stereocilin
chr2	121204213	121205354	-	121204213	121205147	5pMXE	0.25	50	50	ENSMUST00000150332.2	ENSMUSG00000033498.15	Strc	chr2	protein_coding	stereocilin
chr2	121237996	121240619	-	121229950	121240619	A3SS	0.5	50	50	ENSMUST00000154604.8	ENSMUSG00000033486.15	Catsper2	chr2	protein_coding	cation channel, sperm associated 2
chr2	121229950	121230218	-	121229950	121240619	A5SS	0.5	50	50	ENSMUST00000154604.8	ENSMUSG00000033486.15	Catsper2	chr2	protein_coding	cation channel, sperm associated 2
chr2	121244686	121255006	+	121244686;121253008	121252930;121255006	ES	0.5	50	50	ENSMUST00000028683.14	ENSMUSG00000027248.14	Pdia3	chr2	protein_coding	protein disulfide isomerase associated 3
chr2	121255123	121257076	+	121255123	121262133	A3SS	0.5	50	50	ENSMUST00000135079.2	ENSMUSG00000027248.14	Pdia3	chr2	protein_coding	protein disulfide isomerase associated 3
chr2	121260064	121262133	+	121255123	121262133	A5SS	0.5	50	50	ENSMUST00000135079.2	ENSMUSG00000027248.14	Pdia3	chr2	protein_coding	protein disulfide isomerase associated 3
chr2	121271822	121271886	-	121271822	121271908	A5SS	0.5	50	50	ENSMUST00000028679.11	ENSMUSG00000027246.13	Ell3	chr2	protein_coding	elongation factor RNA polymerase II-like 3
chr2	121272662	121282836	-	121272662	121272877	5pMXE	0.5	50	50	ENSMUST00000116432.2	ENSMUSG00000027246.13	Ell3	chr2	protein_coding	elongation factor RNA polymerase II-like 3
chr2	121283649;121284690	121284479;121285425	-	121283649;121284285	121283963;121285425	MXE	0.5	100	100	ENSMUST00000140752.8	ENSMUSG00000046110.16	Serinc4	chr2	protein_coding	serine incorporator 4
chr2	121284285;121284690	121284475;121285425	-	121284285	121285425	cassetteExon	0.5	100	100	ENSMUST00000140752.8	ENSMUSG00000046110.16	Serinc4	chr2	protein_coding	serine incorporator 4
chr2	121284285;121284690	121284479;121285425	-	121284285	121285425	cassetteExon	0.5	100	100	ENSMUST00000140752.8	ENSMUSG00000046110.16	Serinc4	chr2	protein_coding	serine incorporator 4
chr2	121285518;121285836	121285757;121286144	-	121285518	121286144	cassetteExon	0.5	100	100	ENSMUST00000140752.8	ENSMUSG00000046110.16	Serinc4	chr2	protein_coding	serine incorporator 4
chr2	121282655	121282836	-	121272662	121282836	A3SS	0.5	50	50	ENSMUST00000140752.8	ENSMUSG00000046110.16	Serinc4	chr2	protein_coding	serine incorporator 4
chr2	121283649	121285425	-	121283649;121284690	121284479;121285425	ES	0.33	50	50	ENSMUST00000110613.9	ENSMUSG00000046110.16	Serinc4	chr2	protein_coding	serine incorporator 4
chr2	121283649;121284285	121283963;121284479	-	121283649	121284479	cassetteExon	0.5	100	100	ENSMUST00000110613.9	ENSMUSG00000046110.16	Serinc4	chr2	protein_coding	serine incorporator 4
chr2	121284285	121284475	-	121284285	121284479	A5SS	0.33	50	50	ENSMUST00000056312.10	ENSMUSG00000046110.16	Serinc4	chr2	protein_coding	serine incorporator 4
chr2	121283649	121284479	-	121283649	121283963	A5SS&ES	0.33	50	50	ENSMUST00000127435.8	ENSMUSG00000046110.16	Serinc4	chr2	protein_coding	serine incorporator 4
chr2	121283649;121284285	121283963;121285425	-	121283649	121285425	cassetteExon	0.5	100	100	ENSMUST00000140135.8	ENSMUSG00000046110.16	Serinc4	chr2	protein_coding	serine incorporator 4
chr2	121280564	121286057	+	121280564	121281202	3pMXE	0.2	50	50	ENSMUST00000139253.8	ENSMUSG00000074884.13	Serf2	chr2	protein_coding	small EDRK-rich factor 2
chr2	121280564	121287490	+	121280564	121281202	3pMXE	0.2	50	50	ENSMUST00000139253.8	ENSMUSG00000074884.13	Serf2	chr2	protein_coding	small EDRK-rich factor 2
chr2	121280564	121281069	+	121280564	121281202	A3SS	0.2	50	50	ENSMUST00000139253.8	ENSMUSG00000074884.13	Serf2	chr2	protein_coding	small EDRK-rich factor 2
chr2	121280564	121281179	+	121280564	121281202	A3SS	0.2	50	50	ENSMUST00000139253.8	ENSMUSG00000074884.13	Serf2	chr2	protein_coding	small EDRK-rich factor 2
chr2	121280564	121286057	+	121280564	121281069	3pMXE	0.2	50	50	ENSMUST00000110615.8	ENSMUSG00000074884.13	Serf2	chr2	protein_coding	small EDRK-rich factor 2
chr2	121280564	121287490	+	121280564	121281069	3pMXE	0.2	50	50	ENSMUST00000110615.8	ENSMUSG00000074884.13	Serf2	chr2	protein_coding	small EDRK-rich factor 2
chr2	121280564	121281179	+	121280564	121281069	A3SS	0.2	50	50	ENSMUST00000110615.8	ENSMUSG00000074884.13	Serf2	chr2	protein_coding	small EDRK-rich factor 2
chr2	121280564	121286057	+	121280564	121281179	3pMXE	0.2	50	50	ENSMUST00000099475.12	ENSMUSG00000074884.13	Serf2	chr2	protein_coding	small EDRK-rich factor 2
chr2	121280564	121287490	+	121280564	121281179	3pMXE	0.2	50	50	ENSMUST00000099475.12	ENSMUSG00000074884.13	Serf2	chr2	protein_coding	small EDRK-rich factor 2
chr2	121287772	121288473	+	121287772;121288182	121288127;121288473	ES	0.5	50	50	ENSMUST00000154418.8	ENSMUSG00000074884.13	Serf2	chr2	protein_coding	small EDRK-rich factor 2
chr2	121280564	121287490	+	121280564	121286057	A3SS&ES	0.2	50	50	ENSMUST00000154418.8	ENSMUSG00000074884.13	Serf2	chr2	protein_coding	small EDRK-rich factor 2
chr2	121287187	121287490	+	121280564	121287490	A5SS	0.5	50	50	ENSMUST00000148575.2	ENSMUSG00000074884.13	Serf2	chr2	protein_coding	small EDRK-rich factor 2
chr2	121287772	121288473	+	121288182	121288473	A5SS	0.5	50	50	ENSMUST00000125849.8	ENSMUSG00000027245.12	Hypk	chr2	protein_coding	huntingtin interacting protein K
chr2	121287772	121288473	+	121287772	121288127	A3SS	0.5	50	50	ENSMUST00000131870.2	ENSMUSG00000027245.12	Hypk	chr2	protein_coding	huntingtin interacting protein K
chr2	121348278;121348746	121348699;121349899	+	121348278	121349899	cassetteExon	0.5	100	100	ENSMUST00000028676.12	ENSMUSG00000027242.15	Wdr76	chr2	protein_coding	WD repeat domain 76
chr2	121361922	121362218	+	121361922	121364589	A3SS	0.5	50	50	ENSMUST00000028676.12	ENSMUSG00000027242.15	Wdr76	chr2	protein_coding	WD repeat domain 76
chr2	121337329	121341020	+	121337344	121341020	A5SS	0.33	50	50	ENSMUST00000028676.12	ENSMUSG00000027242.15	Wdr76	chr2	protein_coding	WD repeat domain 76
chr2	121340416	121341020	+	121337344	121341020	A5SS	0.33	50	50	ENSMUST00000028676.12	ENSMUSG00000027242.15	Wdr76	chr2	protein_coding	WD repeat domain 76
chr2	121340416	121341020	+	121337329	121341020	A5SS	0.33	50	50	ENSMUST00000110602.9	ENSMUSG00000027242.15	Wdr76	chr2	protein_coding	WD repeat domain 76
chr2	121393454	121404026	-	121393454;121399461	121399374;121404026	ES	0.5	50	50	ENSMUST00000133898.8	ENSMUSG00000027238.18	Frmd5	chr2	protein_coding	FERM domain containing 5
chr2	121378504	121379370	-	121378129	121379370	A3SS	0.33	50	50	ENSMUST00000133898.8	ENSMUSG00000027238.18	Frmd5	chr2	protein_coding	FERM domain containing 5
chr2	121379190	121379370	-	121378129	121379370	A3SS	0.33	50	50	ENSMUST00000133898.8	ENSMUSG00000027238.18	Frmd5	chr2	protein_coding	FERM domain containing 5
chr2	121379713	121381521	-	121379713	121383819	A5SS	0.5	50	50	ENSMUST00000133898.8	ENSMUSG00000027238.18	Frmd5	chr2	protein_coding	FERM domain containing 5
chr2	121388368	121388958	-	121388368	121393366	A5SS	0.5	50	50	ENSMUST00000133898.8	ENSMUSG00000027238.18	Frmd5	chr2	protein_coding	FERM domain containing 5
chr2	121406900	121414246	-	121406900	121416387	A5SS	0.5	50	50	ENSMUST00000133898.8	ENSMUSG00000027238.18	Frmd5	chr2	protein_coding	FERM domain containing 5
chr2	121422243	121617743	-	121422243	121595512	5pMXE	0.25	50	50	ENSMUST00000110593.9	ENSMUSG00000027238.18	Frmd5	chr2	protein_coding	FERM domain containing 5
chr2	121422243	121636999	-	121422243	121595512	5pMXE	0.25	50	50	ENSMUST00000110593.9	ENSMUSG00000027238.18	Frmd5	chr2	protein_coding	FERM domain containing 5
chr2	121422243	121637211	-	121422243	121595512	5pMXE	0.25	50	50	ENSMUST00000110593.9	ENSMUSG00000027238.18	Frmd5	chr2	protein_coding	FERM domain containing 5
chr2	121379190	121379370	-	121378504	121379370	A3SS	0.33	50	50	ENSMUST00000110593.9	ENSMUSG00000027238.18	Frmd5	chr2	protein_coding	FERM domain containing 5
chr2	121422243	121617743	-	121422243	121637211	A5SS	0.25	50	50	ENSMUST00000138157.8	ENSMUSG00000027238.18	Frmd5	chr2	protein_coding	FERM domain containing 5
chr2	121422243	121636999	-	121422243	121637211	A5SS	0.25	50	50	ENSMUST00000138157.8	ENSMUSG00000027238.18	Frmd5	chr2	protein_coding	FERM domain containing 5
chr2	121422243	121636999	-	121422243	121617743	5pMXE	0.25	50	50	ENSMUST00000121219.8	ENSMUSG00000027238.18	Frmd5	chr2	protein_coding	FERM domain containing 5
chr2	121393454	121404026	-	121399461	121404026	3pMXE	0.5	50	50	ENSMUST00000145075.8	ENSMUSG00000027238.18	Frmd5	chr2	protein_coding	FERM domain containing 5
chr2	121737259	121742352	+	121737259;121741378	121741280;121742352	ES	0.5	50	50	ENSMUST00000110586.10	ENSMUSG00000060227.16	Golm2	chr2	protein_coding	golgi membrane protein 2
chr2	121742522;121756209	121756042;121763959	+	121742522	121763959	cassetteExon	0.5	100	100	ENSMUST00000110586.10	ENSMUSG00000060227.16	Golm2	chr2	protein_coding	golgi membrane protein 2
chr2	121698337	121729279	+	121698012	121729279	A5SS	0.5	50	50	ENSMUST00000110586.10	ENSMUSG00000060227.16	Golm2	chr2	protein_coding	golgi membrane protein 2
chr2	121807950	121811633	+	121807950;121809522	121809373;121811633	ES	0.5	50	50	ENSMUST00000036647.13	ENSMUSG00000033411.17	Ctdspl2	chr2	protein_coding	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
chr2	121809522	121817430	+	121809522;121811845	121811633;121817430	ES	0.5	50	50	ENSMUST00000036647.13	ENSMUSG00000033411.17	Ctdspl2	chr2	protein_coding	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
chr2	121799760	121807816	+	121799760	121807812	A3SS	0.5	50	50	ENSMUST00000036647.13	ENSMUSG00000033411.17	Ctdspl2	chr2	protein_coding	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
chr2	121807950	121809376	+	121807950	121809373	A3SS	0.33	50	50	ENSMUST00000036647.13	ENSMUSG00000033411.17	Ctdspl2	chr2	protein_coding	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
chr2	121823913	121824151	+	121823913	121834382	A3SS	0.5	50	50	ENSMUST00000036647.13	ENSMUSG00000033411.17	Ctdspl2	chr2	protein_coding	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
chr2	121787238	121799551	+	121787098	121799551	A5SS	0.5	50	50	ENSMUST00000036647.13	ENSMUSG00000033411.17	Ctdspl2	chr2	protein_coding	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
chr2	121807950	121811633	+	121807950;121809522	121809376;121811633	ES	0.5	50	50	ENSMUST00000110578.8	ENSMUSG00000033411.17	Ctdspl2	chr2	protein_coding	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
chr2	121807950;121809522	121809373;121817430	+	121807950;121811845	121811633;121817430	MXE	0.5	100	100	ENSMUST00000138920.8	ENSMUSG00000033411.17	Ctdspl2	chr2	protein_coding	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
chr2	121807950;121809522	121809376;121817430	+	121807950;121811845	121811633;121817430	MXE	0.5	100	100	ENSMUST00000138920.8	ENSMUSG00000033411.17	Ctdspl2	chr2	protein_coding	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
chr2	121807950	121811633	+	121809522	121811633	5pMXE	0.5	50	50	ENSMUST00000127265.2	ENSMUSG00000033411.17	Ctdspl2	chr2	protein_coding	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
chr2	121934534	121938190	-	121934534	121938518	A5SS	0.5	50	50	ENSMUST00000036450.8	ENSMUSG00000033396.14	Spg11	chr2	protein_coding	SPG11, spatacsin vesicle trafficking associated
chr2	121998515;122000351	122000222;122000483	+	121998515	122000483	cassetteExon	0.5	100	100	ENSMUST00000036089.8	ENSMUSG00000033368.9	Trim69	chr2	protein_coding	tripartite motif-containing 69
chr2	122017026	122021088	+	122017026;122018530	122018391;122021088	ES	0.5	50	50	ENSMUST00000028661.6	ENSMUSG00000027229.6	Terb2	chr2	protein_coding	telomere repeat binding bouquet formation protein 2
chr2	122114058	122115054	-	122114058;122114379	122114330;122115054	ES	0.5	50	50	ENSMUST00000053734.6	ENSMUSG00000068452.9	Duox2	chr2	protein_coding	dual oxidase 2
chr2	122115820;122116589	122116506;122116964	-	122115820	122116964	cassetteExon	0.5	100	100	ENSMUST00000053734.6	ENSMUSG00000068452.9	Duox2	chr2	protein_coding	dual oxidase 2
chr2	122115820	122115980	-	122115820	122116964	A5SS	0.33	50	50	ENSMUST00000053734.6	ENSMUSG00000068452.9	Duox2	chr2	protein_coding	dual oxidase 2
chr2	122115820	122115980	-	122115820	122116506	A5SS	0.33	50	50	ENSMUST00000237546.2	ENSMUSG00000068452.9	Duox2	chr2	protein_coding	dual oxidase 2
chr2	122135757;122136169	122136035;122136792	-	122135757	122136792	cassetteExon	0.5	100	100	ENSMUST00000110538.8	ENSMUSG00000027224.15	Duoxa1	chr2	protein_coding	dual oxidase maturation factor 1
chr2	122137344	122143413	-	122137344;122138431	122138372;122143413	ES	0.5	50	50	ENSMUST00000110537.8	ENSMUSG00000027224.15	Duoxa1	chr2	protein_coding	dual oxidase maturation factor 1
chr2	122143529	122144151	-	122143529;122143925	122143880;122144151	ES	0.5	50	50	ENSMUST00000110537.8	ENSMUSG00000027224.15	Duoxa1	chr2	protein_coding	dual oxidase maturation factor 1
chr2	122143529	122143903	-	122143529	122143880	A5SS	0.33	50	50	ENSMUST00000110537.8	ENSMUSG00000027224.15	Duoxa1	chr2	protein_coding	dual oxidase maturation factor 1
chr2	122135757	122136792	-	122135757	122136035	5pMXE	0.5	50	50	ENSMUST00000155561.2	ENSMUSG00000027224.15	Duoxa1	chr2	protein_coding	dual oxidase maturation factor 1
chr2	122143529;122143925	122143903;122144151	-	122143529	122144151	cassetteExon	0.5	100	100	ENSMUST00000148417.8	ENSMUSG00000027224.15	Duoxa1	chr2	protein_coding	dual oxidase maturation factor 1
chr2	122143529	122144151	-	122143529	122143903	5pMXE	0.33	50	50	ENSMUST00000147788.8	ENSMUSG00000027224.15	Duoxa1	chr2	protein_coding	dual oxidase maturation factor 1
chr2	122135757	122136792	-	122136169	122136792	3pMXE	0.5	50	50	ENSMUST00000154412.2	ENSMUSG00000027224.15	Duoxa1	chr2	protein_coding	dual oxidase maturation factor 1
chr2	122180020	122184510	-	122180020;122184365	122184246;122184510	ES	0.5	50	50	ENSMUST00000048635.13	ENSMUSG00000033256.15	Shf	chr2	protein_coding	Src homology 2 domain containing F
chr2	122190070	122199128	-	122190070	122197165	5pMXE	0.5	50	50	ENSMUST00000048635.13	ENSMUSG00000033256.15	Shf	chr2	protein_coding	Src homology 2 domain containing F
chr2	122184678;122186096	122185956;122187564	-	122184678	122187564	cassetteExon	0.5	100	100	ENSMUST00000048635.13	ENSMUSG00000033256.15	Shf	chr2	protein_coding	Src homology 2 domain containing F
chr2	122184441	122187564	-	122184678	122187564	A3SS&ES	0.33	50	50	ENSMUST00000048635.13	ENSMUSG00000033256.15	Shf	chr2	protein_coding	Src homology 2 domain containing F
chr2	122184365	122184512	-	122184365	122184510	A5SS	0.5	50	50	ENSMUST00000048635.13	ENSMUSG00000033256.15	Shf	chr2	protein_coding	Src homology 2 domain containing F
chr2	122187770	122188675	-	122187770	122189929	A5SS	0.5	50	50	ENSMUST00000048635.13	ENSMUSG00000033256.15	Shf	chr2	protein_coding	Src homology 2 domain containing F
chr2	122184441	122187564	-	122186096	122187564	A3SS&ES	0.33	50	50	ENSMUST00000139819.8	ENSMUSG00000033256.15	Shf	chr2	protein_coding	Src homology 2 domain containing F
chr2	122180020;122184441	122184246;122187564	-	122180020;122184678	122184510;122187564	MXE	0.5	100	100	ENSMUST00000110532.9	ENSMUSG00000033256.15	Shf	chr2	protein_coding	Src homology 2 domain containing F
chr2	122180020	122184510	-	122180020	122184246	A5SS&ES	0.5	50	50	ENSMUST00000151130.8	ENSMUSG00000033256.15	Shf	chr2	protein_coding	Src homology 2 domain containing F
chr2	122286883;122288138	122287949;122288365	+	122286883	122288365	cassetteExon	0.5	100	100	ENSMUST00000110525.8	ENSMUSG00000027219.14	Slc28a2	chr2	protein_coding	solute carrier family 28 (sodium-coupled nucleoside transporter), member 2
chr2	122257116	122270605	+	122257116	122270335	A3SS	0.5	50	50	ENSMUST00000110525.8	ENSMUSG00000027219.14	Slc28a2	chr2	protein_coding	solute carrier family 28 (sodium-coupled nucleoside transporter), member 2
chr2	122271487	122272043	+	122271487	122272040	A3SS	0.5	50	50	ENSMUST00000110525.8	ENSMUSG00000027219.14	Slc28a2	chr2	protein_coding	solute carrier family 28 (sodium-coupled nucleoside transporter), member 2
chr2	122428681	122428808	-	122428681	122430860	A5SS	0.5	50	50	ENSMUST00000028624.9	ENSMUSG00000027199.15	Gatm	chr2	protein_coding	glycine amidinotransferase (L-arginine:glycine amidinotransferase)
chr2	122469879	122472614	+	122469879;122471229	122471037;122472614	ES	0.5	50	50	ENSMUST00000239506.1	ENSMUSG00000118663.1	Spata5l1	chr2	protein_coding	--
chr2	122463185	122464222	+	122463185	122466453	A3SS	0.5	50	50	ENSMUST00000239506.1	ENSMUSG00000118663.1	Spata5l1	chr2	protein_coding	--
chr2	122480053	122481136	+	122480053;122480262	122480177;122481136	ES	0.5	50	50	ENSMUST00000142767.8	ENSMUSG00000033213.17	AA467197	chr2	protein_coding	expressed sequence AA467197
chr2	122479861	122479992	+	122479674	122479992	A5SS	0.5	50	50	ENSMUST00000142767.8	ENSMUSG00000033213.17	AA467197	chr2	protein_coding	expressed sequence AA467197
chr2	122531472	122543950	-	122531472;122536461	122536315;122543950	ES	0.5	50	50	ENSMUST00000005952.11	ENSMUSG00000005802.13	Slc30a4	chr2	protein_coding	solute carrier family 30 (zinc transporter), member 4
chr2	122549124	122559815	+	122549124;122550088	122549983;122559815	ES	0.5	50	50	ENSMUST00000142323.8	ENSMUSG00000087017.8	4930417H01Rik	chr2	lncRNA	RIKEN cDNA 4930417H01 gene
chr2	122550088	122560078	+	122550088	122559815	3pMXE	0.33	50	50	ENSMUST00000142323.8	ENSMUSG00000087017.8	4930417H01Rik	chr2	lncRNA	RIKEN cDNA 4930417H01 gene
chr2	122550088	122560081	+	122550088	122559815	3pMXE	0.33	50	50	ENSMUST00000142323.8	ENSMUSG00000087017.8	4930417H01Rik	chr2	lncRNA	RIKEN cDNA 4930417H01 gene
chr2	122544904	122549042	+	122544096	122549042	A5SS	0.33	50	50	ENSMUST00000142323.8	ENSMUSG00000087017.8	4930417H01Rik	chr2	lncRNA	RIKEN cDNA 4930417H01 gene
chr2	122546246	122549042	+	122544096	122549042	A5SS	0.33	50	50	ENSMUST00000142323.8	ENSMUSG00000087017.8	4930417H01Rik	chr2	lncRNA	RIKEN cDNA 4930417H01 gene
chr2	122544904;122546246	122546149;122549042	+	122544904	122549042	cassetteExon	0.5	100	100	ENSMUST00000148977.8	ENSMUSG00000087017.8	4930417H01Rik	chr2	lncRNA	RIKEN cDNA 4930417H01 gene
chr2	122549124	122560078	+	122549124	122559815	A3SS	0.33	50	50	ENSMUST00000148977.8	ENSMUSG00000087017.8	4930417H01Rik	chr2	lncRNA	RIKEN cDNA 4930417H01 gene
chr2	122544904	122549042	+	122546246	122549042	5pMXE	0.33	50	50	ENSMUST00000153728.8	ENSMUSG00000087017.8	4930417H01Rik	chr2	lncRNA	RIKEN cDNA 4930417H01 gene
chr2	122549124;122550088	122549983;122560078	+	122549124	122560078	cassetteExon	0.5	100	100	ENSMUST00000153728.8	ENSMUSG00000087017.8	4930417H01Rik	chr2	lncRNA	RIKEN cDNA 4930417H01 gene
chr2	122549124	122559815	+	122549124	122549983	A3SS&ES	0.33	50	50	ENSMUST00000155018.2	ENSMUSG00000087017.8	4930417H01Rik	chr2	lncRNA	RIKEN cDNA 4930417H01 gene
chr2	122549124	122560078	+	122549124	122549983	A3SS&ES	0.33	50	50	ENSMUST00000155018.2	ENSMUSG00000087017.8	4930417H01Rik	chr2	lncRNA	RIKEN cDNA 4930417H01 gene
chr2	122550088	122560078	+	122550088	122560081	A3SS	0.33	50	50	ENSMUST00000155018.2	ENSMUSG00000087017.8	4930417H01Rik	chr2	lncRNA	RIKEN cDNA 4930417H01 gene
chr2	122549124	122560078	+	122550088	122560078	5pMXE	0.5	50	50	ENSMUST00000123403.2	ENSMUSG00000087017.8	4930417H01Rik	chr2	lncRNA	RIKEN cDNA 4930417H01 gene
chr2	122580624	122580904	+	122580624	122584509	A3SS	0.5	50	50	ENSMUST00000005954.9	ENSMUSG00000005804.15	Bloc1s6	chr2	protein_coding	biogenesis of lysosomal organelles complex-1, subunit 6, pallidin
chr2	122584650	122586050	+	122584650	122586046	A3SS	0.5	50	50	ENSMUST00000005954.9	ENSMUSG00000005804.15	Bloc1s6	chr2	protein_coding	biogenesis of lysosomal organelles complex-1, subunit 6, pallidin
chr2	122586133	122587857	+	122586133	122587975	A3SS	0.33	50	50	ENSMUST00000005954.9	ENSMUSG00000005804.15	Bloc1s6	chr2	protein_coding	biogenesis of lysosomal organelles complex-1, subunit 6, pallidin
chr2	122586133	122587921	+	122586133	122587975	A3SS	0.33	50	50	ENSMUST00000005954.9	ENSMUSG00000005804.15	Bloc1s6	chr2	protein_coding	biogenesis of lysosomal organelles complex-1, subunit 6, pallidin
chr2	122580773	122584509	+	122580624	122584509	A5SS	0.5	50	50	ENSMUST00000005954.9	ENSMUSG00000005804.15	Bloc1s6	chr2	protein_coding	biogenesis of lysosomal organelles complex-1, subunit 6, pallidin
chr2	122586133	122587921	+	122586133	122587857	3pMXE	0.33	50	50	ENSMUST00000127595.8	ENSMUSG00000005804.15	Bloc1s6	chr2	protein_coding	biogenesis of lysosomal organelles complex-1, subunit 6, pallidin
chr2	122641891	122649493	+	122641891;122646025	122645842;122649493	ES	0.5	50	50	ENSMUST00000005953.11	ENSMUSG00000005803.15	Sqor	chr2	protein_coding	sulfide quinone oxidoreductase
chr2	122649560	122651201	+	122649560;122650052	122649874;122651201	ES	0.5	50	50	ENSMUST00000005953.11	ENSMUSG00000005803.15	Sqor	chr2	protein_coding	sulfide quinone oxidoreductase
chr2	122607359;122608710	122608589;122626864	+	122607359	122626864	cassetteExon	0.5	100	100	ENSMUST00000005953.11	ENSMUSG00000005803.15	Sqor	chr2	protein_coding	sulfide quinone oxidoreductase
chr2	122607359	122609806	+	122607359	122626864	A3SS	0.33	50	50	ENSMUST00000005953.11	ENSMUSG00000005803.15	Sqor	chr2	protein_coding	sulfide quinone oxidoreductase
chr2	122629548	122629894	+	122629548	122634270	A3SS	0.5	50	50	ENSMUST00000005953.11	ENSMUSG00000005803.15	Sqor	chr2	protein_coding	sulfide quinone oxidoreductase
chr2	122607592	122626864	+	122607359	122626864	A5SS	0.2	50	50	ENSMUST00000005953.11	ENSMUSG00000005803.15	Sqor	chr2	protein_coding	sulfide quinone oxidoreductase
chr2	122613668	122626864	+	122607359	122626864	A5SS	0.2	50	50	ENSMUST00000005953.11	ENSMUSG00000005803.15	Sqor	chr2	protein_coding	sulfide quinone oxidoreductase
chr2	122624318	122626864	+	122607359	122626864	A5SS	0.2	50	50	ENSMUST00000005953.11	ENSMUSG00000005803.15	Sqor	chr2	protein_coding	sulfide quinone oxidoreductase
chr2	122608710	122626864	+	122607592	122626864	A5SS	0.2	50	50	ENSMUST00000124460.2	ENSMUSG00000005803.15	Sqor	chr2	protein_coding	sulfide quinone oxidoreductase
chr2	122613668	122626864	+	122607592	122626864	A5SS	0.2	50	50	ENSMUST00000124460.2	ENSMUSG00000005803.15	Sqor	chr2	protein_coding	sulfide quinone oxidoreductase
chr2	122624318	122626864	+	122607592	122626864	A5SS	0.2	50	50	ENSMUST00000124460.2	ENSMUSG00000005803.15	Sqor	chr2	protein_coding	sulfide quinone oxidoreductase
chr2	122607359	122609806	+	122607359	122608589	A3SS&ES	0.33	50	50	ENSMUST00000147475.2	ENSMUSG00000005803.15	Sqor	chr2	protein_coding	sulfide quinone oxidoreductase
chr2	122613668	122626864	+	122608710	122626864	A5SS	0.2	50	50	ENSMUST00000147475.2	ENSMUSG00000005803.15	Sqor	chr2	protein_coding	sulfide quinone oxidoreductase
chr2	122624318	122626864	+	122608710	122626864	A5SS	0.2	50	50	ENSMUST00000147475.2	ENSMUSG00000005803.15	Sqor	chr2	protein_coding	sulfide quinone oxidoreductase
chr2	122624318	122626864	+	122613668	122626864	A5SS	0.2	50	50	ENSMUST00000176999.8	ENSMUSG00000005803.15	Sqor	chr2	protein_coding	sulfide quinone oxidoreductase
chr2	124140575	124331905	+	124140575;124242284	124242163;124331905	ES	0.5	50	50	ENSMUST00000103241.8	ENSMUSG00000027200.18	Sema6d	chr2	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
chr2	124502264;124502681	124502625;124505941	+	124502264	124505941	cassetteExon	0.5	100	100	ENSMUST00000103241.8	ENSMUSG00000027200.18	Sema6d	chr2	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
chr2	124502264;124504279	124504124;124505941	+	124502264	124505941	cassetteExon	0.5	100	100	ENSMUST00000103241.8	ENSMUSG00000027200.18	Sema6d	chr2	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
chr2	124502264;124504291	124504124;124505941	+	124502264	124505941	cassetteExon	0.5	100	100	ENSMUST00000103241.8	ENSMUSG00000027200.18	Sema6d	chr2	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
chr2	124331932	124348514	+	124331932	124495501	A3SS	0.5	50	50	ENSMUST00000103241.8	ENSMUSG00000027200.18	Sema6d	chr2	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
chr2	124501804	124502164	+	124501804	124502203	A3SS	0.5	50	50	ENSMUST00000103241.8	ENSMUSG00000027200.18	Sema6d	chr2	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
chr2	124452197	124495501	+	124331932	124495501	A5SS	0.33	50	50	ENSMUST00000103241.8	ENSMUSG00000027200.18	Sema6d	chr2	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
chr2	124452980	124495501	+	124331932	124495501	A5SS	0.33	50	50	ENSMUST00000103241.8	ENSMUSG00000027200.18	Sema6d	chr2	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
chr2	124452980	124495501	+	124452197	124495501	A5SS	0.33	50	50	ENSMUST00000132088.2	ENSMUSG00000027200.18	Sema6d	chr2	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
chr2	124502264;124504279	124504124;124505941	+	124502264;124502681	124502625;124505941	MXE	0.5	100	100	ENSMUST00000078621.12	ENSMUSG00000027200.18	Sema6d	chr2	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
chr2	124502264;124504291	124504124;124505941	+	124502264;124502681	124502625;124505941	MXE	0.5	100	100	ENSMUST00000078621.12	ENSMUSG00000027200.18	Sema6d	chr2	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
chr2	124502681;124504279	124504124;124505941	+	124502681	124505941	cassetteExon	0.5	100	100	ENSMUST00000078621.12	ENSMUSG00000027200.18	Sema6d	chr2	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
chr2	124502681;124504291	124504124;124505941	+	124502681	124505941	cassetteExon	0.5	100	100	ENSMUST00000078621.12	ENSMUSG00000027200.18	Sema6d	chr2	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
chr2	124502264;124502681	124502625;124504124	+	124502264	124504124	cassetteExon	0.5	100	100	ENSMUST00000077847.12	ENSMUSG00000027200.18	Sema6d	chr2	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
chr2	124504279	124505941	+	124504291	124505941	A5SS	0.25	50	50	ENSMUST00000077847.12	ENSMUSG00000027200.18	Sema6d	chr2	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
chr2	124922817	124924951	+	124922817;124923247	124923147;124924951	ES	0.5	50	50	ENSMUST00000070353.4	ENSMUSG00000035183.15	Slc24a5	chr2	protein_coding	solute carrier family 24, member 5
chr2	124911273	124922541	+	124910871	124922541	A5SS	0.5	50	50	ENSMUST00000070353.4	ENSMUSG00000035183.15	Slc24a5	chr2	protein_coding	solute carrier family 24, member 5
chr2	124928636;124929509	124929463;124929597	-	124928636	124929597	cassetteExon	0.5	100	100	ENSMUST00000129945.2	ENSMUSG00000027201.17	Myef2	chr2	protein_coding	myelin basic protein expression factor 2, repressor
chr2	124938040	124939897	-	124938040;124939554	124939483;124939897	ES	0.5	50	50	ENSMUST00000110501.8	ENSMUSG00000027201.17	Myef2	chr2	protein_coding	myelin basic protein expression factor 2, repressor
chr2	124940438;124940767	124940717;124942239	-	124940438	124942239	cassetteExon	0.5	100	100	ENSMUST00000110501.8	ENSMUSG00000027201.17	Myef2	chr2	protein_coding	myelin basic protein expression factor 2, repressor
chr2	124938040	124940370	-	124938040;124939995	124939897;124940370	ES	0.5	50	50	ENSMUST00000142718.8	ENSMUSG00000027201.17	Myef2	chr2	protein_coding	myelin basic protein expression factor 2, repressor
chr2	124938040	124939483	-	124938040	124940370	A5SS	0.33	50	50	ENSMUST00000137091.3	ENSMUSG00000027201.17	Myef2	chr2	protein_coding	myelin basic protein expression factor 2, repressor
chr2	124979200	124989321	+	124978622	124989321	A5SS	0.5	50	50	ENSMUST00000238754.2	ENSMUSG00000074872.4	Ctxn2	chr2	protein_coding	cortexin 2
chr2	125003071;125008138	125008043;125011333	+	125003071;125007510	125007415;125011333	MXE	0.5	100	100	ENSMUST00000110494.9	ENSMUSG00000027202.13	Slc12a1	chr2	protein_coding	solute carrier family 12, member 1
chr2	125003071;125008688	125008593;125011333	+	125003071;125007510	125007415;125011333	MXE	0.5	100	100	ENSMUST00000110494.9	ENSMUSG00000027202.13	Slc12a1	chr2	protein_coding	solute carrier family 12, member 1
chr2	125003071	125007415	+	125003071	125008043	A3SS	0.33	50	50	ENSMUST00000147095.2	ENSMUSG00000027202.13	Slc12a1	chr2	protein_coding	solute carrier family 12, member 1
chr2	125003071	125008593	+	125003071	125008043	A3SS	0.33	50	50	ENSMUST00000147095.2	ENSMUSG00000027202.13	Slc12a1	chr2	protein_coding	solute carrier family 12, member 1
chr2	125003071;125008138	125008043;125011333	+	125003071;125008688	125008593;125011333	MXE	0.5	100	100	ENSMUST00000110495.3	ENSMUSG00000027202.13	Slc12a1	chr2	protein_coding	solute carrier family 12, member 1
chr2	125512240	125520608	-	125512240	125515091	5pMXE	0.33	50	50	ENSMUST00000110480.8	ENSMUSG00000035109.15	Shc4	chr2	protein_coding	SHC (Src homology 2 domain containing) family, member 4
chr2	125512240	125515026	-	125512240	125515091	A5SS	0.33	50	50	ENSMUST00000110480.8	ENSMUSG00000035109.15	Shc4	chr2	protein_coding	SHC (Src homology 2 domain containing) family, member 4
chr2	125512240	125515026	-	125512240	125520608	A5SS	0.33	50	50	ENSMUST00000042246.14	ENSMUSG00000035109.15	Shc4	chr2	protein_coding	SHC (Src homology 2 domain containing) family, member 4
chr2	125691773;125693899	125693770;125700856	-	125691773	125700856	cassetteExon	0.5	100	100	ENSMUST00000110463.8	ENSMUSG00000027206.14	Cops2	chr2	protein_coding	COP9 signalosome subunit 2
chr2	125684631	125686730	-	125684652	125686730	A3SS	0.33	50	50	ENSMUST00000110463.8	ENSMUSG00000027206.14	Cops2	chr2	protein_coding	COP9 signalosome subunit 2
chr2	125684679	125686730	-	125684652	125686730	A3SS	0.33	50	50	ENSMUST00000110463.8	ENSMUSG00000027206.14	Cops2	chr2	protein_coding	COP9 signalosome subunit 2
chr2	125681404	125682388	-	125681404	125682244	A5SS	0.5	50	50	ENSMUST00000110463.8	ENSMUSG00000027206.14	Cops2	chr2	protein_coding	COP9 signalosome subunit 2
chr2	125684679	125686730	-	125684631	125686730	A3SS	0.33	50	50	ENSMUST00000028635.6	ENSMUSG00000027206.14	Cops2	chr2	protein_coding	COP9 signalosome subunit 2
chr2	125701297	125712246	+	125701297	125701858	3pMXE	0.33	50	50	ENSMUST00000135782.2	ENSMUSG00000027207.16	Galk2	chr2	protein_coding	galactokinase 2
chr2	125701297	125720198	+	125701297	125701858	3pMXE	0.33	50	50	ENSMUST00000135782.2	ENSMUSG00000027207.16	Galk2	chr2	protein_coding	galactokinase 2
chr2	125701297;125712381	125712246;125720198	+	125701297	125720198	cassetteExon	0.5	100	100	ENSMUST00000028636.13	ENSMUSG00000027207.16	Galk2	chr2	protein_coding	galactokinase 2
chr2	125720286	125729763	+	125720286	125729784	A3SS	0.5	50	50	ENSMUST00000028636.13	ENSMUSG00000027207.16	Galk2	chr2	protein_coding	galactokinase 2
chr2	125738711	125751049	+	125738711	125771481	A3SS	0.5	50	50	ENSMUST00000028636.13	ENSMUSG00000027207.16	Galk2	chr2	protein_coding	galactokinase 2
chr2	125708288	125720198	+	125701297	125720198	A5SS	0.25	50	50	ENSMUST00000028636.13	ENSMUSG00000027207.16	Galk2	chr2	protein_coding	galactokinase 2
chr2	125708305	125720198	+	125701297	125720198	A5SS	0.25	50	50	ENSMUST00000028636.13	ENSMUSG00000027207.16	Galk2	chr2	protein_coding	galactokinase 2
chr2	125708288	125720198	+	125712381	125720198	A5SS&ES	0.25	50	50	ENSMUST00000125084.8	ENSMUSG00000027207.16	Galk2	chr2	protein_coding	galactokinase 2
chr2	125708305	125712246	+	125701297	125712246	A5SS	0.5	50	50	ENSMUST00000125084.8	ENSMUSG00000027207.16	Galk2	chr2	protein_coding	galactokinase 2
chr2	125708305	125720198	+	125712381	125720198	A5SS&ES	0.25	50	50	ENSMUST00000125084.8	ENSMUSG00000027207.16	Galk2	chr2	protein_coding	galactokinase 2
chr2	125708305	125720198	+	125708288	125720198	A5SS	0.25	50	50	ENSMUST00000134337.8	ENSMUSG00000027207.16	Galk2	chr2	protein_coding	galactokinase 2
chr2	125708305;125712381	125712246;125720198	+	125708305	125720198	cassetteExon	0.5	100	100	ENSMUST00000094604.9	ENSMUSG00000027207.16	Galk2	chr2	protein_coding	galactokinase 2
chr2	126231326	126239508	-	126231326;126234768	126234722;126239508	ES	0.5	50	50	ENSMUST00000040128.12	ENSMUSG00000060131.12	Atp8b4	chr2	protein_coding	ATPase, class I, type 8B, member 4
chr2	126331364	126341804	-	126331364	126341531	5pMXE	0.33	50	50	ENSMUST00000040128.12	ENSMUSG00000060131.12	Atp8b4	chr2	protein_coding	ATPase, class I, type 8B, member 4
chr2	126331364	126333401	-	126331364	126341531	A5SS	0.33	50	50	ENSMUST00000040128.12	ENSMUSG00000060131.12	Atp8b4	chr2	protein_coding	ATPase, class I, type 8B, member 4
chr2	126331364	126341804	-	126331364	126333401	5pMXE	0.33	50	50	ENSMUST00000040149.13	ENSMUSG00000060131.12	Atp8b4	chr2	protein_coding	ATPase, class I, type 8B, member 4
chr2	126231326	126239508	-	126234768	126239508	3pMXE	0.5	50	50	ENSMUST00000129187.2	ENSMUSG00000060131.12	Atp8b4	chr2	protein_coding	ATPase, class I, type 8B, member 4
chr2	126395552;126395833	126395702;126403457	+	126395552	126403457	cassetteExon	0.5	100	100	ENSMUST00000061491.14	ENSMUSG00000027359.17	Slc27a2	chr2	protein_coding	solute carrier family 27 (fatty acid transporter), member 2
chr2	126398138	126403457	+	126395552	126403457	A5SS	0.33	50	50	ENSMUST00000061491.14	ENSMUSG00000027359.17	Slc27a2	chr2	protein_coding	solute carrier family 27 (fatty acid transporter), member 2
chr2	126406774	126409667	+	126406756	126409667	A5SS	0.5	50	50	ENSMUST00000061491.14	ENSMUSG00000027359.17	Slc27a2	chr2	protein_coding	solute carrier family 27 (fatty acid transporter), member 2
chr2	126398138	126403457	+	126395833	126403457	A5SS	0.33	50	50	ENSMUST00000126249.2	ENSMUSG00000027359.17	Slc27a2	chr2	protein_coding	solute carrier family 27 (fatty acid transporter), member 2
chr2	126500497;126505008	126504911;126517276	-	126500497	126517276	cassetteExon	0.5	100	100	ENSMUST00000110425.9	ENSMUSG00000027361.16	Gabpb1	chr2	protein_coding	GA repeat binding protein, beta 1
chr2	126488665	126491988	-	126488668	126491988	A3SS	0.5	50	50	ENSMUST00000110425.9	ENSMUSG00000027361.16	Gabpb1	chr2	protein_coding	GA repeat binding protein, beta 1
chr2	126500497	126517215	-	126500497	126517276	A5SS	0.33	50	50	ENSMUST00000110425.9	ENSMUSG00000027361.16	Gabpb1	chr2	protein_coding	GA repeat binding protein, beta 1
chr2	126505008	126517954	-	126505008	126517276	5pMXE	0.33	50	50	ENSMUST00000103227.8	ENSMUSG00000027361.16	Gabpb1	chr2	protein_coding	GA repeat binding protein, beta 1
chr2	126500497	126517215	-	126500497	126504911	A5SS&ES	0.33	50	50	ENSMUST00000103227.8	ENSMUSG00000027361.16	Gabpb1	chr2	protein_coding	GA repeat binding protein, beta 1
chr2	126505008	126517215	-	126505008	126517276	A5SS	0.33	50	50	ENSMUST00000103227.8	ENSMUSG00000027361.16	Gabpb1	chr2	protein_coding	GA repeat binding protein, beta 1
chr2	126500497	126517276	-	126500497	126504911	A5SS&ES	0.33	50	50	ENSMUST00000039978.13	ENSMUSG00000027361.16	Gabpb1	chr2	protein_coding	GA repeat binding protein, beta 1
chr2	126505008	126517215	-	126505008	126517954	A5SS	0.33	50	50	ENSMUST00000039978.13	ENSMUSG00000027361.16	Gabpb1	chr2	protein_coding	GA repeat binding protein, beta 1
chr2	126500497;126505008	126504911;126517215	-	126500497	126517215	cassetteExon	0.5	100	100	ENSMUST00000130263.2	ENSMUSG00000027361.16	Gabpb1	chr2	protein_coding	GA repeat binding protein, beta 1
chr2	126560084	126561912	+	126560084	126561945	A3SS	0.5	50	50	ENSMUST00000138859.2	ENSMUSG00000027363.16	Usp8	chr2	protein_coding	ubiquitin specific peptidase 8
chr2	126622046	126625140	-	126622046;126622432	126622308;126625140	ES	0.33	50	50	ENSMUST00000136319.8	ENSMUSG00000027364.15	Usp50	chr2	protein_coding	ubiquitin specific peptidase 50
chr2	126603611	126611791	-	126575133	126611791	A3SS	0.5	50	50	ENSMUST00000136319.8	ENSMUSG00000027364.15	Usp50	chr2	protein_coding	ubiquitin specific peptidase 50
chr2	126622490	126625140	-	126622432	126625140	A3SS	0.33	50	50	ENSMUST00000136319.8	ENSMUSG00000027364.15	Usp50	chr2	protein_coding	ubiquitin specific peptidase 50
chr2	126611923	126612343	-	126611923	126617644	A5SS	0.5	50	50	ENSMUST00000136319.8	ENSMUSG00000027364.15	Usp50	chr2	protein_coding	ubiquitin specific peptidase 50
chr2	126622046	126625140	-	126622046;126622490	126622308;126625140	ES	0.33	50	50	ENSMUST00000028842.9	ENSMUSG00000027364.15	Usp50	chr2	protein_coding	ubiquitin specific peptidase 50
chr2	126637414;126638368	126638258;126639031	-	126637414	126639031	cassetteExon	0.5	100	100	ENSMUST00000103224.10	ENSMUSG00000027365.15	Trpm7	chr2	protein_coding	transient receptor potential cation channel, subfamily M, member 7
chr2	126641283;126642257	126642209;126643043	-	126641283	126643043	cassetteExon	0.5	100	100	ENSMUST00000103224.10	ENSMUSG00000027365.15	Trpm7	chr2	protein_coding	transient receptor potential cation channel, subfamily M, member 7
chr2	126647004	126649209	-	126647007	126649209	A3SS	0.5	50	50	ENSMUST00000103224.10	ENSMUSG00000027365.15	Trpm7	chr2	protein_coding	transient receptor potential cation channel, subfamily M, member 7
chr2	126754665;126755273	126755220;126755452	-	126754665	126755452	cassetteExon	0.5	100	100	ENSMUST00000028844.11	ENSMUSG00000027366.13	Sppl2a	chr2	protein_coding	signal peptide peptidase like 2A
chr2	126850820	126851591	+	126850820	126853715	A3SS	0.33	50	50	ENSMUST00000149254.9	ENSMUSG00000001998.16	Ap4e1	chr2	protein_coding	adaptor-related protein complex AP-4, epsilon 1
chr2	126850820	126853711	+	126850820	126853715	A3SS	0.33	50	50	ENSMUST00000149254.9	ENSMUSG00000001998.16	Ap4e1	chr2	protein_coding	adaptor-related protein complex AP-4, epsilon 1
chr2	126850820;126851795	126851591;126853711	+	126850820	126853711	cassetteExon	0.5	100	100	ENSMUST00000129859.2	ENSMUSG00000001998.16	Ap4e1	chr2	protein_coding	adaptor-related protein complex AP-4, epsilon 1
chr2	126877130	126885341	+	126877130;126879779	126879706;126885341	ES	0.5	50	50	ENSMUST00000110394.8	ENSMUSG00000001998.16	Ap4e1	chr2	protein_coding	adaptor-related protein complex AP-4, epsilon 1
chr2	126885463	126885599	+	126885463	126885567	A3SS	0.5	50	50	ENSMUST00000110394.8	ENSMUSG00000001998.16	Ap4e1	chr2	protein_coding	adaptor-related protein complex AP-4, epsilon 1
chr2	126891482;126892932	126892853;126894100	+	126891482	126894100	cassetteExon	0.5	100	100	ENSMUST00000002063.15	ENSMUSG00000001998.16	Ap4e1	chr2	protein_coding	adaptor-related protein complex AP-4, epsilon 1
chr2	126912650;126920997	126920850;126922450	+	126912650	126922450	cassetteExon	0.5	100	100	ENSMUST00000142861.2	ENSMUSG00000001999.16	Blvra	chr2	protein_coding	biliverdin reductase A
chr2	126922298	126922450	+	126912650	126922450	A5SS	0.33	50	50	ENSMUST00000142861.2	ENSMUSG00000001999.16	Blvra	chr2	protein_coding	biliverdin reductase A
chr2	126928862	126929187	+	126928862	126933959	A3SS	0.33	50	50	ENSMUST00000002064.15	ENSMUSG00000001999.16	Blvra	chr2	protein_coding	biliverdin reductase A
chr2	126928862	126932164	+	126928862	126933959	A3SS	0.33	50	50	ENSMUST00000002064.15	ENSMUSG00000001999.16	Blvra	chr2	protein_coding	biliverdin reductase A
chr2	126928862	126929187	+	126928862	126932164	A3SS	0.33	50	50	ENSMUST00000135529.8	ENSMUSG00000001999.16	Blvra	chr2	protein_coding	biliverdin reductase A
chr2	126922298	126922450	+	126920997	126922450	A5SS	0.33	50	50	ENSMUST00000135529.8	ENSMUSG00000001999.16	Blvra	chr2	protein_coding	biliverdin reductase A
chr2	126969114	126975769	-	126969114;126969642	126969405;126975769	ES	0.33	50	50	ENSMUST00000110387.4	ENSMUSG00000034906.16	Ncaph	chr2	protein_coding	non-SMC condensin I complex, subunit H
chr2	126969642;126975490	126975319;126975769	-	126969642	126975769	cassetteExon	0.5	100	100	ENSMUST00000110387.4	ENSMUSG00000034906.16	Ncaph	chr2	protein_coding	non-SMC condensin I complex, subunit H
chr2	126975490	126975769	-	126969114	126975769	A3SS	0.33	50	50	ENSMUST00000175885.8	ENSMUSG00000034906.16	Ncaph	chr2	protein_coding	non-SMC condensin I complex, subunit H
chr2	126984134	126984444	-	126984134	126985135	A5SS	0.5	50	50	ENSMUST00000132773.2	ENSMUSG00000074825.5	Itpripl1	chr2	protein_coding	inositol 1,4,5-triphosphate receptor interacting protein-like 1
chr2	127046770	127050095	-	127029434	127050095	A3SS	0.5	50	50	ENSMUST00000056146.2	ENSMUSG00000044145.3	1810024B03Rik	chr2	protein_coding	RIKEN cDNA 1810024B03 gene
chr2	127084957	127087643	-	127084957;127086920	127086833;127087643	ES	0.5	50	50	ENSMUST00000003759.11	ENSMUSG00000003662.11	Ciao1	chr2	protein_coding	cytosolic iron-sulfur protein assembly 1
chr2	127088633	127089402	-	127088633;127089078	127088930;127089402	ES	0.5	50	50	ENSMUST00000003759.11	ENSMUSG00000003662.11	Ciao1	chr2	protein_coding	cytosolic iron-sulfur protein assembly 1
chr2	127084957	127088333	-	127084957;127087844	127087643;127088333	ES	0.5	50	50	ENSMUST00000174030.8	ENSMUSG00000003662.11	Ciao1	chr2	protein_coding	cytosolic iron-sulfur protein assembly 1
chr2	127084957	127086833	-	127084957	127088333	A5SS	0.33	50	50	ENSMUST00000174863.8	ENSMUSG00000003662.11	Ciao1	chr2	protein_coding	cytosolic iron-sulfur protein assembly 1
chr2	127084957	127088333	-	127087844	127088333	3pMXE	0.5	50	50	ENSMUST00000172636.2	ENSMUSG00000003662.11	Ciao1	chr2	protein_coding	cytosolic iron-sulfur protein assembly 1
chr2	127090004	127097925	+	127090004;127090729	127090412;127097925	ES	0.5	50	50	ENSMUST00000035871.15	ENSMUSG00000034850.16	Tmem127	chr2	protein_coding	transmembrane protein 127
chr2	127090729	127098877	+	127090729;127098089	127097925;127098877	ES	0.5	50	50	ENSMUST00000035871.15	ENSMUSG00000034850.16	Tmem127	chr2	protein_coding	transmembrane protein 127
chr2	127090004;127098089	127097925;127098877	+	127090004;127090729	127090412;127098877	MXE	0.5	100	100	ENSMUST00000174503.2	ENSMUSG00000034850.16	Tmem127	chr2	protein_coding	transmembrane protein 127
chr2	127183671	127184271	+	127180805	127184271	A5SS	0.33	50	50	ENSMUST00000059839.9	ENSMUSG00000050468.13	Astl	chr2	protein_coding	astacin-like metalloendopeptidase (M12 family)
chr2	127183898	127184271	+	127180805	127184271	A5SS	0.33	50	50	ENSMUST00000059839.9	ENSMUSG00000050468.13	Astl	chr2	protein_coding	astacin-like metalloendopeptidase (M12 family)
chr2	127183898	127184271	+	127183671	127184271	A5SS	0.33	50	50	ENSMUST00000089673.10	ENSMUSG00000050468.13	Astl	chr2	protein_coding	astacin-like metalloendopeptidase (M12 family)
chr2	127282522	127286337	-	127282522;127284044	127283794;127286337	ES	0.33	50	50	ENSMUST00000028848.4	ENSMUSG00000027371.11	Fahd2a	chr2	protein_coding	fumarylacetoacetate hydrolase domain containing 2A
chr2	127282418	127283794	-	127282522	127283794	A3SS	0.5	50	50	ENSMUST00000028848.4	ENSMUSG00000027371.11	Fahd2a	chr2	protein_coding	fumarylacetoacetate hydrolase domain containing 2A
chr2	127280489;127282522	127282306;127286337	-	127280489	127286337	cassetteExon	0.5	100	100	ENSMUST00000137366.8	ENSMUSG00000027371.11	Fahd2a	chr2	protein_coding	fumarylacetoacetate hydrolase domain containing 2A
chr2	127284044	127286337	-	127280489	127286337	A3SS	0.33	50	50	ENSMUST00000137366.8	ENSMUSG00000027371.11	Fahd2a	chr2	protein_coding	fumarylacetoacetate hydrolase domain containing 2A
chr2	127282522	127286337	-	127284044	127286337	A3SS&ES	0.5	50	50	ENSMUST00000137502.2	ENSMUSG00000027371.11	Fahd2a	chr2	protein_coding	fumarylacetoacetate hydrolase domain containing 2A
chr2	127352914	127363696	-	127352914	127363158	5pMXE	0.5	50	50	ENSMUST00000028850.15	ENSMUSG00000079056.13	Kcnip3	chr2	protein_coding	Kv channel interacting protein 3, calsenilin
chr2	127307898	127352749	-	127307894	127352749	A3SS	0.5	50	50	ENSMUST00000028850.15	ENSMUSG00000079056.13	Kcnip3	chr2	protein_coding	Kv channel interacting protein 3, calsenilin
chr2	127307898	127323925	-	127307898	127352749	A5SS	0.5	50	50	ENSMUST00000103215.11	ENSMUSG00000079056.13	Kcnip3	chr2	protein_coding	Kv channel interacting protein 3, calsenilin
chr2	127370696	127371052	-	127370738	127371052	A3SS	0.5	50	50	ENSMUST00000028855.14	ENSMUSG00000027376.16	Prom2	chr2	protein_coding	prominin 2
chr2	127423466	127423779	-	127423466	127426586	A5SS	0.33	50	50	ENSMUST00000110366.8	ENSMUSG00000034800.16	Zfp661	chr2	protein_coding	zinc finger protein 661
chr2	127423466	127426550	-	127423466	127426586	A5SS	0.33	50	50	ENSMUST00000110366.8	ENSMUSG00000034800.16	Zfp661	chr2	protein_coding	zinc finger protein 661
chr2	127423466	127426550	-	127423466;127423995	127423779;127426550	ES	0.5	50	50	ENSMUST00000110368.9	ENSMUSG00000034800.16	Zfp661	chr2	protein_coding	zinc finger protein 661
chr2	127432401	127432615	+	127429405	127432615	A5SS	0.5	50	50	ENSMUST00000028852.13	ENSMUSG00000027374.13	Mrps5	chr2	protein_coding	mitochondrial ribosomal protein S5
chr2	127480634	127497961	-	127480634;127482308	127482141;127497961	ES	0.5	50	50	ENSMUST00000028854.15	ENSMUSG00000027375.15	Mal	chr2	protein_coding	myelin and lymphocyte protein, T cell differentiation protein
chr2	127608038	127610091	-	127608041	127610091	A3SS	0.5	50	50	ENSMUST00000028857.14	ENSMUSG00000027378.17	Nphp1	chr2	protein_coding	nephronophthisis 1 (juvenile) homolog (human)
chr2	127585036	127586337	-	127585036	127587816	A5SS	0.5	50	50	ENSMUST00000028857.14	ENSMUSG00000027378.17	Nphp1	chr2	protein_coding	nephronophthisis 1 (juvenile) homolog (human)
chr2	127696906	127709203	+	127691209	127709203	A5SS	0.5	50	50	ENSMUST00000126410.2	ENSMUSG00000027380.11	Acoxl	chr2	protein_coding	acyl-Coenzyme A oxidase-like
chr2	127751110	127753350	+	127726458	127753350	A5SS	0.5	50	50	ENSMUST00000028859.8	ENSMUSG00000027380.11	Acoxl	chr2	protein_coding	acyl-Coenzyme A oxidase-like
chr2	127969732	127970540	+	127968172	127970540	A5SS	0.33	50	50	ENSMUST00000146023.8	ENSMUSG00000027381.17	Bcl2l11	chr2	protein_coding	BCL2-like 11 (apoptosis facilitator)
chr2	127970323	127970540	+	127968172	127970540	A5SS	0.33	50	50	ENSMUST00000146023.8	ENSMUSG00000027381.17	Bcl2l11	chr2	protein_coding	BCL2-like 11 (apoptosis facilitator)
chr2	127970934	127989005	+	127970934	127971557	3pMXE	0.5	50	50	ENSMUST00000089634.12	ENSMUSG00000027381.17	Bcl2l11	chr2	protein_coding	BCL2-like 11 (apoptosis facilitator)
chr2	127970676;127970934	127970845;127989005	+	127970676	127989005	cassetteExon	0.5	100	100	ENSMUST00000019281.14	ENSMUSG00000027381.17	Bcl2l11	chr2	protein_coding	BCL2-like 11 (apoptosis facilitator)
chr2	127970676	127989005	+	127970934	127989005	A5SS	0.5	50	50	ENSMUST00000110341.9	ENSMUSG00000027381.17	Bcl2l11	chr2	protein_coding	BCL2-like 11 (apoptosis facilitator)
chr2	127970323	127970540	+	127969732	127970540	A5SS	0.33	50	50	ENSMUST00000129206.2	ENSMUSG00000027381.17	Bcl2l11	chr2	protein_coding	BCL2-like 11 (apoptosis facilitator)
chr2	128020615	128037914	-	128020615;128021068	128020988;128037914	ES	0.33	50	50	ENSMUST00000225087.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128038103	128079948	-	128038103;128038361	128038248;128079948	ES	0.16	50	50	ENSMUST00000225087.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128038361	128172765	-	128038361;128080120	128079948;128172765	ES	0.11	50	50	ENSMUST00000225087.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128038361;128059672	128059520;128079948	-	128038361	128079948	cassetteExon	0.5	100	100	ENSMUST00000225087.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128038361;128059672	128059520;128172765	-	128038361;128080120	128079948;128172765	MXE	0.5	100	100	ENSMUST00000225087.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969;128178414	128178292;128271014	-	128172969	128271014	cassetteExon	0.5	100	100	ENSMUST00000225087.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969;128198512	128198370;128271014	-	128172969	128271014	cassetteExon	0.5	100	100	ENSMUST00000225087.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969;128198555	128198370;128271014	-	128172969	128271014	cassetteExon	0.5	100	100	ENSMUST00000225087.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969;128214347	128214128;128271014	-	128172969	128271014	cassetteExon	0.5	100	100	ENSMUST00000225087.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128032034	128037914	-	128021068	128037914	A3SS	0.33	50	50	ENSMUST00000225087.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128046666	128079948	-	128038361	128079948	A3SS	0.16	50	50	ENSMUST00000225087.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128079695	128079948	-	128038361	128079948	A3SS	0.16	50	50	ENSMUST00000225087.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128140032	128172765	-	128080120	128172765	A3SS	0.11	50	50	ENSMUST00000225087.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128142916	128172765	-	128080120	128172765	A3SS	0.11	50	50	ENSMUST00000225087.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128153028	128172765	-	128080120	128172765	A3SS	0.11	50	50	ENSMUST00000225087.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128157366	128172765	-	128080120	128172765	A3SS	0.11	50	50	ENSMUST00000225087.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128159592	128172765	-	128080120	128172765	A3SS	0.11	50	50	ENSMUST00000225087.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128164618	128172765	-	128080120	128172765	A3SS	0.11	50	50	ENSMUST00000225087.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172892	128271014	-	128172969	128271014	A3SS	0.12	50	50	ENSMUST00000225087.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128178832	128271014	-	128172969	128271014	A3SS	0.12	50	50	ENSMUST00000225087.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128187780	128271014	-	128172969	128271014	A3SS	0.12	50	50	ENSMUST00000225087.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128080120	128080778	-	128080120	128172765	A5SS	0.33	50	50	ENSMUST00000225087.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128080120	128082484	-	128080120	128172765	A5SS	0.33	50	50	ENSMUST00000225087.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969	128173205	-	128172969	128271014	A5SS	0.14	50	50	ENSMUST00000225087.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969	128175398	-	128172969	128271014	A5SS	0.14	50	50	ENSMUST00000225087.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969	128175573	-	128172969	128271014	A5SS	0.14	50	50	ENSMUST00000225087.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128020615;128038103	128037914;128079948	-	128020615	128079948	cassetteExon	0.5	100	100	ENSMUST00000239376.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128020615;128038361	128037914;128079948	-	128020615	128079948	cassetteExon	0.5	100	100	ENSMUST00000239376.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128020615;128038361	128037914;128172765	-	128020615;128080120	128079948;128172765	MXE	0.5	100	100	ENSMUST00000239376.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128046666	128079948	-	128020615	128079948	A3SS	0.16	50	50	ENSMUST00000239376.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128059672	128079948	-	128020615	128079948	A3SS	0.16	50	50	ENSMUST00000239376.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128059672	128172765	-	128080120	128172765	A3SS&ES	0.11	50	50	ENSMUST00000239376.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128079695	128079948	-	128020615	128079948	A3SS	0.16	50	50	ENSMUST00000239376.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128020615	128020988	-	128020615	128079948	A5SS	0.33	50	50	ENSMUST00000239376.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172892;128198512	128198370;128271014	-	128172892	128271014	cassetteExon	0.5	100	100	ENSMUST00000239191.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172892;128198555	128198370;128271014	-	128172892	128271014	cassetteExon	0.5	100	100	ENSMUST00000239191.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128032034	128037914	-	128020615	128037914	A3SS	0.33	50	50	ENSMUST00000239191.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128178414	128271014	-	128172892	128271014	A3SS	0.12	50	50	ENSMUST00000239191.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128178832	128271014	-	128172892	128271014	A3SS	0.12	50	50	ENSMUST00000239191.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128187780	128271014	-	128172892	128271014	A3SS	0.12	50	50	ENSMUST00000239191.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128214347	128271014	-	128172892	128271014	A3SS	0.12	50	50	ENSMUST00000239191.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128038103;128038361	128038248;128172765	-	128038103;128080120	128079948;128172765	MXE	0.5	100	100	ENSMUST00000239314.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128046666	128079948	-	128038103	128079948	A3SS	0.16	50	50	ENSMUST00000239314.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128059672	128079948	-	128038103	128079948	A3SS	0.16	50	50	ENSMUST00000239314.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128079695	128079948	-	128038103	128079948	A3SS	0.16	50	50	ENSMUST00000239314.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128038361;128059672	128059520;128172765	-	128038361	128172765	cassetteExon	0.5	100	100	ENSMUST00000239172.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128020615;128080120	128079948;128172765	-	128020615;128038361	128020988;128172765	MXE	0.5	100	100	ENSMUST00000239172.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128140032	128172765	-	128038361	128172765	A3SS	0.11	50	50	ENSMUST00000239172.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128142916	128172765	-	128038361	128172765	A3SS	0.11	50	50	ENSMUST00000239172.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128153028	128172765	-	128038361	128172765	A3SS	0.11	50	50	ENSMUST00000239172.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128157366	128172765	-	128038361	128172765	A3SS	0.11	50	50	ENSMUST00000239172.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128159592	128172765	-	128038361	128172765	A3SS	0.11	50	50	ENSMUST00000239172.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128164618	128172765	-	128038361	128172765	A3SS	0.11	50	50	ENSMUST00000239172.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128059672	128172765	-	128059672;128080120	128079948;128172765	ES	0.11	50	50	ENSMUST00000239188.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128046666	128079948	-	128059672	128079948	A3SS&ES	0.16	50	50	ENSMUST00000239188.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128046808	128059520	-	128038361	128059520	A3SS	0.5	50	50	ENSMUST00000239188.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128079695	128079948	-	128059672	128079948	A3SS	0.16	50	50	ENSMUST00000239188.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128140032	128172765	-	128059672	128172765	A3SS	0.12	50	50	ENSMUST00000239387.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128142916	128172765	-	128059672	128172765	A3SS	0.12	50	50	ENSMUST00000239387.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128153028	128172765	-	128059672	128172765	A3SS	0.12	50	50	ENSMUST00000239387.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128157366	128172765	-	128059672	128172765	A3SS	0.12	50	50	ENSMUST00000239387.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128159592	128172765	-	128059672	128172765	A3SS	0.12	50	50	ENSMUST00000239387.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128164618	128172765	-	128059672	128172765	A3SS	0.12	50	50	ENSMUST00000239387.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128079695	128079948	-	128046666	128079948	A3SS	0.16	50	50	ENSMUST00000239179.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128038361	128172765	-	128080120	128172765	3pMXE	0.11	50	50	ENSMUST00000239237.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128080120	128080778	-	128080120	128082484	A5SS	0.33	50	50	ENSMUST00000239311.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969	128178292	-	128172969	128175573	5pMXE	0.14	50	50	ENSMUST00000239371.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969	128198370	-	128172969	128175573	5pMXE	0.14	50	50	ENSMUST00000239371.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969	128214128	-	128172969	128175573	5pMXE	0.14	50	50	ENSMUST00000239371.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128142916	128172765	-	128140032	128172765	A3SS	0.16	50	50	ENSMUST00000239371.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128153028	128172765	-	128140032	128172765	A3SS	0.16	50	50	ENSMUST00000239371.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128157366	128172765	-	128140032	128172765	A3SS	0.16	50	50	ENSMUST00000239371.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128159592	128172765	-	128140032	128172765	A3SS	0.16	50	50	ENSMUST00000239371.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128164618	128172765	-	128140032	128172765	A3SS	0.16	50	50	ENSMUST00000239371.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969	128173205	-	128172969	128175573	A5SS	0.14	50	50	ENSMUST00000239371.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969	128175398	-	128172969	128175573	A5SS	0.14	50	50	ENSMUST00000239371.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128142916;128153028	128152944;128172765	-	128142916	128172765	cassetteExon	0.5	100	100	ENSMUST00000239198.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128157366	128172765	-	128142916	128172765	A3SS	0.11	50	50	ENSMUST00000239198.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128159592	128172765	-	128142916	128172765	A3SS	0.11	50	50	ENSMUST00000239198.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128164618	128172765	-	128142916	128172765	A3SS	0.11	50	50	ENSMUST00000239198.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128142916	128149010	-	128142916	128172765	A5SS	0.33	50	50	ENSMUST00000239198.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969;128178414	128178292;128198370	-	128172969	128198370	cassetteExon	0.5	100	100	ENSMUST00000239341.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969;128178414	128178292;128271014	-	128172969;128198555	128198370;128271014	MXE	0.5	100	100	ENSMUST00000239341.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969;128214347	128214128;128271014	-	128172969;128198555	128198370;128271014	MXE	0.5	100	100	ENSMUST00000239341.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172892	128198370	-	128172969	128198370	A3SS	0.25	50	50	ENSMUST00000239341.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172892	128271014	-	128198555	128271014	A3SS&ES	0.12	50	50	ENSMUST00000239341.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128178832	128271014	-	128198555	128271014	A3SS&ES	0.12	50	50	ENSMUST00000239341.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128187780	128198370	-	128172969	128198370	A3SS	0.25	50	50	ENSMUST00000239341.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128187780	128271014	-	128198555	128271014	A3SS&ES	0.12	50	50	ENSMUST00000239341.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128198512	128271014	-	128198555	128271014	A3SS	0.12	50	50	ENSMUST00000239341.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969	128173205	-	128172969	128198370	A5SS	0.14	50	50	ENSMUST00000239341.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969	128175398	-	128172969	128198370	A5SS	0.14	50	50	ENSMUST00000239341.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128178414;128178832	128178713;128271014	-	128178414	128271014	cassetteExon	0.5	100	100	ENSMUST00000135433.9	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969;128198512	128198370;128271014	-	128172969;128178414	128178292;128271014	MXE	0.5	100	100	ENSMUST00000135433.9	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128178414;128198512	128198370;128271014	-	128178414	128271014	cassetteExon	0.5	100	100	ENSMUST00000135433.9	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128178414;128198555	128198370;128271014	-	128178414	128271014	cassetteExon	0.5	100	100	ENSMUST00000135433.9	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969;128214347	128214128;128271014	-	128172969;128178414	128178292;128271014	MXE	0.5	100	100	ENSMUST00000135433.9	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128187780	128271014	-	128178414	128271014	A3SS	0.12	50	50	ENSMUST00000135433.9	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969	128173205	-	128172969	128178292	A5SS	0.14	50	50	ENSMUST00000135433.9	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969	128175398	-	128172969	128178292	A5SS	0.14	50	50	ENSMUST00000135433.9	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128214347	128332566	-	128214347	128271014	5pMXE	0.16	50	50	ENSMUST00000239349.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969;128198512	128198370;128271014	-	128172969;128214347	128214128;128271014	MXE	0.5	100	100	ENSMUST00000239349.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128178832	128271014	-	128214347	128271014	A3SS&ES	0.12	50	50	ENSMUST00000239349.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128187780	128271014	-	128214347	128271014	A3SS&ES	0.12	50	50	ENSMUST00000239349.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969	128173205	-	128172969	128214128	A5SS	0.14	50	50	ENSMUST00000239349.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969	128175398	-	128172969	128214128	A5SS	0.14	50	50	ENSMUST00000239349.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128214347	128244645	-	128214347	128271014	A5SS	0.16	50	50	ENSMUST00000239349.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128214347	128264511	-	128214347	128271014	A5SS	0.16	50	50	ENSMUST00000239349.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128214347	128268411	-	128214347	128271014	A5SS	0.16	50	50	ENSMUST00000239349.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128214347	128270714	-	128214347	128271014	A5SS	0.16	50	50	ENSMUST00000239349.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128157366	128172765	-	128153028	128172765	A3SS	0.2	50	50	ENSMUST00000239210.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128159592	128172765	-	128153028	128172765	A3SS	0.2	50	50	ENSMUST00000239210.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128164618	128172765	-	128153028	128172765	A3SS	0.2	50	50	ENSMUST00000239210.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128142916	128152944	-	128142916	128149010	A5SS&ES	0.33	50	50	ENSMUST00000239210.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969;128198512	128198370;128271014	-	128172969;128178832	128178292;128271014	MXE	0.5	100	100	ENSMUST00000239302.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128178414;128198512	128198370;128271014	-	128178414;128178832	128178713;128271014	MXE	0.5	100	100	ENSMUST00000239302.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969;128198555	128198370;128271014	-	128172969;128178832	128178292;128271014	MXE	0.5	100	100	ENSMUST00000239302.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128178414;128198555	128198370;128271014	-	128178414;128178832	128178713;128271014	MXE	0.5	100	100	ENSMUST00000239302.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969;128214347	128214128;128271014	-	128172969;128178832	128178292;128271014	MXE	0.5	100	100	ENSMUST00000239302.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128187780	128271014	-	128178832	128271014	A3SS	0.12	50	50	ENSMUST00000239302.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128142916	128172765	-	128153028	128172765	3pMXE	0.11	50	50	ENSMUST00000239218.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128159592	128172765	-	128157366	128172765	A3SS	0.11	50	50	ENSMUST00000239202.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128164618	128172765	-	128157366	128172765	A3SS	0.11	50	50	ENSMUST00000239202.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128164618	128172765	-	128159592	128172765	A3SS	0.11	50	50	ENSMUST00000239221.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969	128175398	-	128172969	128173205	5pMXE	0.14	50	50	ENSMUST00000239358.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969	128271014	-	128198512	128271014	A3SS&ES	0.12	50	50	ENSMUST00000239382.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128178414	128198370	-	128172892	128198370	A3SS	0.25	50	50	ENSMUST00000239382.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128178414	128271014	-	128198512	128271014	A3SS&ES	0.12	50	50	ENSMUST00000239382.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128178832	128271014	-	128198512	128271014	A3SS&ES	0.12	50	50	ENSMUST00000239382.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128187780	128198370	-	128172892	128198370	A3SS	0.25	50	50	ENSMUST00000239382.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128187780	128271014	-	128198512	128271014	A3SS&ES	0.12	50	50	ENSMUST00000239382.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128214347	128271014	-	128198512	128271014	A3SS	0.12	50	50	ENSMUST00000239382.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969;128214347	128214128;128271014	-	128172969;128198512	128178292;128271014	MXE	0.5	100	100	ENSMUST00000239295.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172892	128271014	-	128198512	128271014	A3SS&ES	0.12	50	50	ENSMUST00000239295.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128187780	128198370	-	128178414	128198370	A3SS	0.25	50	50	ENSMUST00000239295.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128187780;128198512	128198370;128271014	-	128187780	128271014	cassetteExon	0.5	100	100	ENSMUST00000132149.3	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128187780;128198555	128198370;128271014	-	128187780	128271014	cassetteExon	0.5	100	100	ENSMUST00000132149.3	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128214347	128271014	-	128198555	128271014	A3SS	0.25	50	50	ENSMUST00000239319.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969	128271014	-	128198555	128271014	3pMXE	0.12	50	50	ENSMUST00000239248.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128178414	128271014	-	128198555	128271014	3pMXE	0.12	50	50	ENSMUST00000239248.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128172969	128271014	-	128214347	128271014	3pMXE	0.12	50	50	ENSMUST00000239199.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128178414	128271014	-	128214347	128271014	3pMXE	0.12	50	50	ENSMUST00000239199.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128214347	128268411	-	128214347	128264511	5pMXE	0.16	50	50	ENSMUST00000138486.3	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128214347	128270714	-	128214347	128264511	5pMXE	0.16	50	50	ENSMUST00000138486.3	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128214347	128332566	-	128214347	128264511	5pMXE	0.16	50	50	ENSMUST00000138486.3	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128214347	128244645	-	128214347	128264511	A5SS	0.16	50	50	ENSMUST00000138486.3	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128214347	128332566	-	128214347	128270714	5pMXE	0.16	50	50	ENSMUST00000125354.3	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128214347	128244645	-	128214347	128270714	A5SS	0.16	50	50	ENSMUST00000125354.3	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128214347	128268411	-	128214347	128270714	A5SS	0.16	50	50	ENSMUST00000125354.3	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128214347	128332566	-	128214347	128268411	5pMXE	0.16	50	50	ENSMUST00000239293.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128214347	128244645	-	128214347	128268411	A5SS	0.16	50	50	ENSMUST00000239293.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128214347	128332566	-	128214347	128244645	5pMXE	0.16	50	50	ENSMUST00000239270.2	ENSMUSG00000074813.15	Morrbid	chr2	lncRNA	myeloid RNA regulator of BCL2L11 induced cell death
chr2	128433238	128434172	+	128433402	128434172	A5SS	0.5	50	50	ENSMUST00000155430.8	ENSMUSG00000074812.13	Spdye4c	chr2	protein_coding	speedy/RINGO cell cycle regulator family, member E4C
chr2	128521522	128522314	-	128521522;128522129	128522029;128522314	ES	0.5	50	50	ENSMUST00000014499.10	ENSMUSG00000014355.11	Anapc1	chr2	protein_coding	anaphase promoting complex subunit 1
chr2	128619418	128620840	+	128619418	128620835	A3SS	0.5	50	50	ENSMUST00000014505.5	ENSMUSG00000014361.6	Mertk	chr2	protein_coding	MER proto-oncogene tyrosine kinase
chr2	128679315;128682723	128682652;128683155	+	128679315;128681139	128681068;128683155	MXE	0.5	100	100	ENSMUST00000110325.8	ENSMUSG00000014353.16	Tmem87b	chr2	protein_coding	transmembrane protein 87B
chr2	128679315	128682652	+	128679315	128681068	A3SS&ES	0.5	50	50	ENSMUST00000152210.2	ENSMUSG00000014353.16	Tmem87b	chr2	protein_coding	transmembrane protein 87B
chr2	128835201	128835299	+	128835201	128839525	A3SS	0.5	50	50	ENSMUST00000110320.9	ENSMUSG00000042851.18	Zc3h6	chr2	protein_coding	zinc finger CCCH type containing 6
chr2	128908223	128909292	+	128908223	128910775	A3SS	0.5	50	50	ENSMUST00000035812.14	ENSMUSG00000027394.14	Ttl	chr2	protein_coding	tubulin tyrosine ligase
chr2	128961116	128962054	+	128961116	128964990	A3SS	0.5	50	50	ENSMUST00000103205.11	ENSMUSG00000027395.16	Polr1b	chr2	protein_coding	polymerase (RNA) I polypeptide B
chr2	128964025	128964990	+	128961116	128964990	A5SS	0.5	50	50	ENSMUST00000103205.11	ENSMUSG00000027395.16	Polr1b	chr2	protein_coding	polymerase (RNA) I polypeptide B
chr2	128971777;128972486	128972098;128975195	+	128971777	128975195	cassetteExon	0.5	100	100	ENSMUST00000149118.2	ENSMUSG00000037938.5	Chchd5	chr2	protein_coding	coiled-coil-helix-coiled-coil-helix domain containing 5
chr2	128971777	128975195	+	128972486	128975195	A5SS	0.5	50	50	ENSMUST00000137881.2	ENSMUSG00000037938.5	Chchd5	chr2	protein_coding	coiled-coil-helix-coiled-coil-helix domain containing 5
chr2	129020803	129022374	-	129001159	129022374	A3SS	0.33	50	50	ENSMUST00000148997.8	ENSMUSG00000084826.8	AI847159	chr2	lncRNA	expressed sequence AI847159
chr2	129022179	129022374	-	129001159	129022374	A3SS	0.33	50	50	ENSMUST00000148997.8	ENSMUSG00000084826.8	AI847159	chr2	lncRNA	expressed sequence AI847159
chr2	129020803;129022179	129022130;129022374	-	129020803	129022374	cassetteExon	0.5	100	100	ENSMUST00000141786.2	ENSMUSG00000084826.8	AI847159	chr2	lncRNA	expressed sequence AI847159
chr2	129046075	129046166	+	129046075	129048287	A3SS	0.5	50	50	ENSMUST00000028880.10	ENSMUSG00000027397.15	Slc20a1	chr2	protein_coding	solute carrier family 20, member 1
chr2	129049796	129049912	+	129049796	129049901	A3SS	0.5	50	50	ENSMUST00000028880.10	ENSMUSG00000027397.15	Slc20a1	chr2	protein_coding	solute carrier family 20, member 1
chr2	129041145	129041369	+	129040912	129041369	A5SS	0.5	50	50	ENSMUST00000028880.10	ENSMUSG00000027397.15	Slc20a1	chr2	protein_coding	solute carrier family 20, member 1
chr2	129067830	129071442	-	129067830	129068314	5pMXE	0.5	50	50	ENSMUST00000127525.2	ENSMUSG00000087528.2	9830144P21Rik	chr2	lncRNA	RIKEN cDNA 9830144P21 gene
chr2	129070124	129073729	+	129067815	129073729	A5SS	0.5	50	50	ENSMUST00000143346.8	ENSMUSG00000056738.12	A730036I17Rik	chr2	lncRNA	RIKEN cDNA A730036I17 gene
chr2	129208029	129209160	-	129208010	129209160	A3SS	0.5	50	50	ENSMUST00000028881.14	ENSMUSG00000027398.14	Il1b	chr2	protein_coding	interleukin 1 beta
chr2	129215089	129216654	+	129216245	129216654	A5SS	0.5	50	50	ENSMUST00000156601.2	ENSMUSG00000074805.6	Il1bos	chr2	lncRNA	interleukin 1 beta, opposite strand
chr2	129435614	129450824	+	129435614;129450153	129450053;129450824	ES	0.5	50	50	ENSMUST00000127751.8	ENSMUSG00000037902.19	Sirpa	chr2	protein_coding	signal-regulatory protein alpha
chr2	129434924	129435524	+	129434812	129435524	A5SS	0.33	50	50	ENSMUST00000127751.8	ENSMUSG00000037902.19	Sirpa	chr2	protein_coding	signal-regulatory protein alpha
chr2	129434995	129435524	+	129434812	129435524	A5SS	0.33	50	50	ENSMUST00000127751.8	ENSMUSG00000037902.19	Sirpa	chr2	protein_coding	signal-regulatory protein alpha
chr2	129434924	129435524	+	129434995	129435524	A5SS	0.33	50	50	ENSMUST00000136153.8	ENSMUSG00000037902.19	Sirpa	chr2	protein_coding	signal-regulatory protein alpha
chr2	129451180	129460377	+	129451180	129458143	3pMXE	0.33	50	50	ENSMUST00000153491.8	ENSMUSG00000037902.19	Sirpa	chr2	protein_coding	signal-regulatory protein alpha
chr2	129451180;129457684	129457367;129458143	+	129451180	129458143	cassetteExon	0.5	100	100	ENSMUST00000153491.8	ENSMUSG00000037902.19	Sirpa	chr2	protein_coding	signal-regulatory protein alpha
chr2	129435614	129472213	+	129435614	129450824	A3SS&ES	0.25	50	50	ENSMUST00000161620.8	ENSMUSG00000037902.19	Sirpa	chr2	protein_coding	signal-regulatory protein alpha
chr2	129469905	129471847	+	129469917	129471847	A5SS	0.5	50	50	ENSMUST00000161620.8	ENSMUSG00000037902.19	Sirpa	chr2	protein_coding	signal-regulatory protein alpha
chr2	129435614	129460377	+	129435614	129450824	3pMXE	0.25	50	50	ENSMUST00000136554.2	ENSMUSG00000037902.19	Sirpa	chr2	protein_coding	signal-regulatory protein alpha
chr2	129435614	129460377	+	129435614;129451180	129450824;129460377	ES	0.33	50	50	ENSMUST00000099113.10	ENSMUSG00000037902.19	Sirpa	chr2	protein_coding	signal-regulatory protein alpha
chr2	129451180;129458478	129458143;129460377	+	129451180	129460377	cassetteExon	0.5	100	100	ENSMUST00000099113.10	ENSMUSG00000037902.19	Sirpa	chr2	protein_coding	signal-regulatory protein alpha
chr2	129451180	129457367	+	129451180	129460377	A3SS	0.33	50	50	ENSMUST00000099113.10	ENSMUSG00000037902.19	Sirpa	chr2	protein_coding	signal-regulatory protein alpha
chr2	129435614	129450053	+	129435614	129472213	A3SS	0.25	50	50	ENSMUST00000160952.2	ENSMUSG00000037902.19	Sirpa	chr2	protein_coding	signal-regulatory protein alpha
chr2	129435614	129460377	+	129435614	129472213	A3SS	0.25	50	50	ENSMUST00000160952.2	ENSMUSG00000037902.19	Sirpa	chr2	protein_coding	signal-regulatory protein alpha
chr2	129435614	129450053	+	129435614	129460377	A3SS	0.25	50	50	ENSMUST00000163034.8	ENSMUSG00000037902.19	Sirpa	chr2	protein_coding	signal-regulatory protein alpha
chr2	129458478	129460377	+	129435614	129460377	A5SS	0.33	50	50	ENSMUST00000163034.8	ENSMUSG00000037902.19	Sirpa	chr2	protein_coding	signal-regulatory protein alpha
chr2	129540415	129540539	-	129540415	129541628	A5SS	0.5	50	50	ENSMUST00000028883.12	ENSMUSG00000027400.12	Pdyn	chr2	protein_coding	prodynorphin
chr2	129643924	129669694	+	129643924;129653157	129652408;129669694	ES	0.5	50	50	ENSMUST00000165413.9	ENSMUSG00000037885.19	Stk35	chr2	protein_coding	serine/threonine kinase 35
chr2	129643924	129652408	+	129643924	129669694	A3SS	0.5	50	50	ENSMUST00000166282.3	ENSMUSG00000037885.19	Stk35	chr2	protein_coding	serine/threonine kinase 35
chr2	129653157	129669694	+	129643924	129669694	A5SS	0.5	50	50	ENSMUST00000166282.3	ENSMUSG00000037885.19	Stk35	chr2	protein_coding	serine/threonine kinase 35
chr2	129965288	129977670	+	129954410	129977670	A5SS	0.5	50	50	ENSMUST00000140947.8	ENSMUSG00000027403.13	Tgm6	chr2	protein_coding	transglutaminase 6
chr2	129977843	129978349	+	129977843	129980748	A3SS	0.5	50	50	ENSMUST00000147616.2	ENSMUSG00000027403.13	Tgm6	chr2	protein_coding	transglutaminase 6
chr2	129979414	129980748	+	129977843	129980748	A5SS	0.5	50	50	ENSMUST00000147616.2	ENSMUSG00000027403.13	Tgm6	chr2	protein_coding	transglutaminase 6
chr2	130017361;130018672	130018549;130018935	-	130017361	130018935	cassetteExon	0.5	100	100	ENSMUST00000103199.9	ENSMUSG00000027404.17	Snrpb	chr2	protein_coding	small nuclear ribonucleoprotein B
chr2	130019086	130020654	-	130019086	130021154	A5SS	0.5	50	50	ENSMUST00000103199.9	ENSMUSG00000027404.17	Snrpb	chr2	protein_coding	small nuclear ribonucleoprotein B
chr2	130118778	130119396	+	130118778;130119052	130118952;130119396	ES	0.2	50	50	ENSMUST00000103198.11	ENSMUSG00000027405.17	Nop56	chr2	protein_coding	NOP56 ribonucleoprotein
chr2	130120210;130120451	130120333;130120817	+	130120210	130120817	cassetteExon	0.5	100	100	ENSMUST00000103198.11	ENSMUSG00000027405.17	Nop56	chr2	protein_coding	NOP56 ribonucleoprotein
chr2	130116439	130116554	+	130116396	130116554	A5SS	0.5	50	50	ENSMUST00000103198.11	ENSMUSG00000027405.17	Nop56	chr2	protein_coding	NOP56 ribonucleoprotein
chr2	130118573	130118952	+	130118778	130118952	A5SS&ES	0.5	50	50	ENSMUST00000103198.11	ENSMUSG00000027405.17	Nop56	chr2	protein_coding	NOP56 ribonucleoprotein
chr2	130118573	130119396	+	130119052	130119396	A5SS&ES	0.2	50	50	ENSMUST00000103198.11	ENSMUSG00000027405.17	Nop56	chr2	protein_coding	NOP56 ribonucleoprotein
chr2	130119234	130119396	+	130119052	130119396	A5SS	0.2	50	50	ENSMUST00000103198.11	ENSMUSG00000027405.17	Nop56	chr2	protein_coding	NOP56 ribonucleoprotein
chr2	130119293	130119396	+	130119052	130119396	A5SS	0.2	50	50	ENSMUST00000103198.11	ENSMUSG00000027405.17	Nop56	chr2	protein_coding	NOP56 ribonucleoprotein
chr2	130118573;130119052	130118952;130119396	+	130118573	130119396	cassetteExon	0.5	100	100	ENSMUST00000136621.9	ENSMUSG00000027405.17	Nop56	chr2	protein_coding	NOP56 ribonucleoprotein
chr2	130118573;130119234	130118952;130119396	+	130118573	130119396	cassetteExon	0.5	100	100	ENSMUST00000136621.9	ENSMUSG00000027405.17	Nop56	chr2	protein_coding	NOP56 ribonucleoprotein
chr2	130118573;130119293	130118952;130119396	+	130118573	130119396	cassetteExon	0.5	100	100	ENSMUST00000136621.9	ENSMUSG00000027405.17	Nop56	chr2	protein_coding	NOP56 ribonucleoprotein
chr2	130118778	130119396	+	130118573	130119396	A5SS	0.2	50	50	ENSMUST00000136621.9	ENSMUSG00000027405.17	Nop56	chr2	protein_coding	NOP56 ribonucleoprotein
chr2	130118778;130119234	130118952;130119396	+	130118778	130119396	cassetteExon	0.5	100	100	ENSMUST00000149955.9	ENSMUSG00000027405.17	Nop56	chr2	protein_coding	NOP56 ribonucleoprotein
chr2	130118778;130119293	130118952;130119396	+	130118778	130119396	cassetteExon	0.5	100	100	ENSMUST00000149955.9	ENSMUSG00000027405.17	Nop56	chr2	protein_coding	NOP56 ribonucleoprotein
chr2	130118778	130119396	+	130119234	130119396	A5SS&ES	0.2	50	50	ENSMUST00000143547.2	ENSMUSG00000027405.17	Nop56	chr2	protein_coding	NOP56 ribonucleoprotein
chr2	130119293	130119396	+	130119234	130119396	A5SS	0.2	50	50	ENSMUST00000143547.2	ENSMUSG00000027405.17	Nop56	chr2	protein_coding	NOP56 ribonucleoprotein
chr2	130118778	130119396	+	130118778	130118952	3pMXE	0.5	50	50	ENSMUST00000161025.2	ENSMUSG00000027405.17	Nop56	chr2	protein_coding	NOP56 ribonucleoprotein
chr2	130120210	130120817	+	130120210	130120333	A3SS	0.5	50	50	ENSMUST00000146454.9	ENSMUSG00000027405.17	Nop56	chr2	protein_coding	NOP56 ribonucleoprotein
chr2	130118573	130119396	+	130119234	130119396	5pMXE	0.2	50	50	ENSMUST00000028890.15	ENSMUSG00000027405.17	Nop56	chr2	protein_coding	NOP56 ribonucleoprotein
chr2	130118573	130119396	+	130119293	130119396	5pMXE	0.2	50	50	ENSMUST00000159373.2	ENSMUSG00000027405.17	Nop56	chr2	protein_coding	NOP56 ribonucleoprotein
chr2	130118778	130119396	+	130119293	130119396	5pMXE	0.2	50	50	ENSMUST00000159373.2	ENSMUSG00000027405.17	Nop56	chr2	protein_coding	NOP56 ribonucleoprotein
chr2	130121357	130122183	-	130121646	130122183	A3SS	0.5	50	50	ENSMUST00000028892.11	ENSMUSG00000027406.14	Idh3b	chr2	protein_coding	isocitrate dehydrogenase 3 (NAD+) beta
chr2	130121357	130122183	-	130121357;130121646	130121476;130122183	ES	0.5	50	50	ENSMUST00000184538.2	ENSMUSG00000027406.14	Idh3b	chr2	protein_coding	isocitrate dehydrogenase 3 (NAD+) beta
chr2	130204351	130207496	+	130204351	130207380	A3SS	0.5	50	50	ENSMUST00000110288.9	ENSMUSG00000053552.15	Ebf4	chr2	protein_coding	early B cell factor 4
chr2	130207577	130211288	+	130207577	130211358	A3SS	0.5	50	50	ENSMUST00000110288.9	ENSMUSG00000053552.15	Ebf4	chr2	protein_coding	early B cell factor 4
chr2	130204261	130207380	+	130204351	130207380	A5SS	0.5	50	50	ENSMUST00000110288.9	ENSMUSG00000053552.15	Ebf4	chr2	protein_coding	early B cell factor 4
chr2	130247209	130247424	+	130247209	130247346	A3SS	0.5	50	50	ENSMUST00000188900.2	ENSMUSG00000100963.2	Gm28372	chr2	protein_coding	predicted gene 28372
chr2	130247623	130247701	+	130247623	130248630	A3SS	0.5	50	50	ENSMUST00000188900.2	ENSMUSG00000100963.2	Gm28372	chr2	protein_coding	predicted gene 28372
chr2	130248495	130248630	+	130247623	130248630	A5SS	0.5	50	50	ENSMUST00000188900.2	ENSMUSG00000100963.2	Gm28372	chr2	protein_coding	predicted gene 28372
chr2	130261253;130261810	130261550;130263810	-	130261253	130263810	cassetteExon	0.5	100	100	ENSMUST00000131561.8	ENSMUSG00000037773.15	Pced1a	chr2	protein_coding	PC-esterase domain containing 1A
chr2	130264295;130264624	130264386;130264733	-	130264295	130264733	cassetteExon	0.5	100	100	ENSMUST00000131561.8	ENSMUSG00000037773.15	Pced1a	chr2	protein_coding	PC-esterase domain containing 1A
chr2	130264812	130265358	-	130264812	130265332	A5SS	0.5	50	50	ENSMUST00000131561.8	ENSMUSG00000037773.15	Pced1a	chr2	protein_coding	PC-esterase domain containing 1A
chr2	130264295	130264733	-	130264624	130264733	A3SS	0.5	50	50	ENSMUST00000123977.8	ENSMUSG00000037773.15	Pced1a	chr2	protein_coding	PC-esterase domain containing 1A
chr2	130264295	130264733	-	130264295	130264386	A5SS	0.5	50	50	ENSMUST00000142536.2	ENSMUSG00000037773.15	Pced1a	chr2	protein_coding	PC-esterase domain containing 1A
chr2	130280604;130280750	130280703;130281540	+	130280604;130281445	130280966;130281540	MXE	0.5	100	100	ENSMUST00000128994.8	ENSMUSG00000027411.18	Vps16	chr2	protein_coding	VSP16 CORVET/HOPS core subunit
chr2	130280604;130280825	130280703;130280966	+	130280604	130280966	cassetteExon	0.5	100	100	ENSMUST00000128994.8	ENSMUSG00000027411.18	Vps16	chr2	protein_coding	VSP16 CORVET/HOPS core subunit
chr2	130283423	130283537	+	130283423	130283528	A3SS	0.5	50	50	ENSMUST00000028900.11	ENSMUSG00000027411.18	Vps16	chr2	protein_coding	VSP16 CORVET/HOPS core subunit
chr2	130280750	130281540	+	130281445	130281540	A5SS&ES	0.5	50	50	ENSMUST00000028900.11	ENSMUSG00000027411.18	Vps16	chr2	protein_coding	VSP16 CORVET/HOPS core subunit
chr2	130282948	130283085	+	130282928	130283085	A5SS	0.5	50	50	ENSMUST00000028900.11	ENSMUSG00000027411.18	Vps16	chr2	protein_coding	VSP16 CORVET/HOPS core subunit
chr2	130346255;130351776	130351750;130359651	+	130346255	130359651	cassetteExon	0.5	100	100	ENSMUST00000028769.14	ENSMUSG00000027303.19	Ptpra	chr2	protein_coding	protein tyrosine phosphatase, receptor type, A
chr2	130374099;130374516	130374409;130375004	+	130374099	130375004	cassetteExon	0.5	100	100	ENSMUST00000028769.14	ENSMUSG00000027303.19	Ptpra	chr2	protein_coding	protein tyrosine phosphatase, receptor type, A
chr2	130458662	130471836	-	130446546	130471836	A3SS	0.5	50	50	ENSMUST00000028761.5	ENSMUSG00000027300.11	Ubox5	chr2	protein_coding	U box domain containing 5
chr2	130446546	130456809	-	130446546	130471836	A5SS	0.5	50	50	ENSMUST00000028761.5	ENSMUSG00000027300.11	Ubox5	chr2	protein_coding	U box domain containing 5
chr2	130446546	130471836	-	130446546;130458662	130456809;130471836	ES	0.5	50	50	ENSMUST00000140581.3	ENSMUSG00000027300.11	Ubox5	chr2	protein_coding	U box domain containing 5
chr2	130478547	130479205	-	130478547	130478863	A5SS	0.5	50	50	ENSMUST00000089561.10	ENSMUSG00000037703.15	Lzts3	chr2	protein_coding	leucine zipper, putative tumor suppressor family member 3
chr2	130503758	130505268	-	130503758;130504109	130503997;130505268	ES	0.5	50	50	ENSMUST00000089559.11	ENSMUSG00000068290.12	Ddrgk1	chr2	protein_coding	DDRGK domain containing 1
chr2	130497162	130498994	-	130497162	130500220	A5SS	0.5	50	50	ENSMUST00000089559.11	ENSMUSG00000068290.12	Ddrgk1	chr2	protein_coding	DDRGK domain containing 1
chr2	130500258	130500393	-	130500258	130500509	A5SS	0.5	50	50	ENSMUST00000089559.11	ENSMUSG00000068290.12	Ddrgk1	chr2	protein_coding	DDRGK domain containing 1
chr2	130505474	130505972	-	130505474	130506395	A5SS	0.5	50	50	ENSMUST00000089559.11	ENSMUSG00000068290.12	Ddrgk1	chr2	protein_coding	DDRGK domain containing 1
chr2	130513540	130516159	+	130513540;130514053	130513980;130516159	ES	0.33	50	50	ENSMUST00000103193.5	ENSMUSG00000074797.12	Itpa	chr2	protein_coding	inosine triphosphatase (nucleoside triphosphate pyrophosphatase)
chr2	130514258	130516159	+	130514053	130516159	A5SS	0.33	50	50	ENSMUST00000103193.5	ENSMUSG00000074797.12	Itpa	chr2	protein_coding	inosine triphosphatase (nucleoside triphosphate pyrophosphatase)
chr2	130513540	130516159	+	130513540;130514258	130513980;130516159	ES	0.33	50	50	ENSMUST00000133328.8	ENSMUSG00000074797.12	Itpa	chr2	protein_coding	inosine triphosphatase (nucleoside triphosphate pyrophosphatase)
chr2	130513540	130516159	+	130513540	130513980	3pMXE	0.5	50	50	ENSMUST00000138963.2	ENSMUSG00000074797.12	Itpa	chr2	protein_coding	inosine triphosphatase (nucleoside triphosphate pyrophosphatase)
chr2	130538023	130539279	-	130538023;130538675	130538568;130539279	ES	0.5	50	50	ENSMUST00000099362.11	ENSMUSG00000074796.11	Slc4a11	chr2	protein_coding	solute carrier family 4, sodium bicarbonate transporter-like, member 11
chr2	130554946	130559181	-	130554946;130555423	130555317;130559181	ES	0.5	50	50	ENSMUST00000044766.15	ENSMUSG00000027309.19	4930402H24Rik	chr2	protein_coding	RIKEN cDNA 4930402H24 gene
chr2	130555423	130561760	-	130555423;130559267	130559181;130561760	ES	0.5	50	50	ENSMUST00000044766.15	ENSMUSG00000027309.19	4930402H24Rik	chr2	protein_coding	RIKEN cDNA 4930402H24 gene
chr2	130581018	130582321	-	130581018;130581389	130581291;130582321	ES	0.5	50	50	ENSMUST00000044766.15	ENSMUSG00000027309.19	4930402H24Rik	chr2	protein_coding	RIKEN cDNA 4930402H24 gene
chr2	130654861	130662389	-	130654861;130656223	130656099;130662389	ES	0.5	50	50	ENSMUST00000044766.15	ENSMUSG00000027309.19	4930402H24Rik	chr2	protein_coding	RIKEN cDNA 4930402H24 gene
chr2	130662508	130681884	-	130662508;130664420	130664341;130681884	ES	0.33	50	50	ENSMUST00000044766.15	ENSMUSG00000027309.19	4930402H24Rik	chr2	protein_coding	RIKEN cDNA 4930402H24 gene
chr2	130664420	130748131	-	130664420	130681884	5pMXE	0.33	50	50	ENSMUST00000044766.15	ENSMUSG00000027309.19	4930402H24Rik	chr2	protein_coding	RIKEN cDNA 4930402H24 gene
chr2	130619201;130619422	130619396;130620337	-	130619201	130620337	cassetteExon	0.5	100	100	ENSMUST00000044766.15	ENSMUSG00000027309.19	4930402H24Rik	chr2	protein_coding	RIKEN cDNA 4930402H24 gene
chr2	130645842	130648791	-	130640185	130648791	A3SS	0.5	50	50	ENSMUST00000044766.15	ENSMUSG00000027309.19	4930402H24Rik	chr2	protein_coding	RIKEN cDNA 4930402H24 gene
chr2	130572834	130572973	-	130572834	130578387	A5SS	0.5	50	50	ENSMUST00000044766.15	ENSMUSG00000027309.19	4930402H24Rik	chr2	protein_coding	RIKEN cDNA 4930402H24 gene
chr2	130590708	130599267	-	130590708	130606373	A5SS	0.5	50	50	ENSMUST00000044766.15	ENSMUSG00000027309.19	4930402H24Rik	chr2	protein_coding	RIKEN cDNA 4930402H24 gene
chr2	130664420	130681320	-	130664420	130681884	A5SS	0.33	50	50	ENSMUST00000044766.15	ENSMUSG00000027309.19	4930402H24Rik	chr2	protein_coding	RIKEN cDNA 4930402H24 gene
chr2	130664420	130748131	-	130664420	130681320	5pMXE	0.33	50	50	ENSMUST00000119422.8	ENSMUSG00000027309.19	4930402H24Rik	chr2	protein_coding	RIKEN cDNA 4930402H24 gene
chr2	130554946;130555423	130555317;130561760	-	130554946;130559267	130559181;130561760	MXE	0.5	100	100	ENSMUST00000139684.2	ENSMUSG00000027309.19	4930402H24Rik	chr2	protein_coding	RIKEN cDNA 4930402H24 gene
chr2	130581018	130582321	-	130581018	130581291	5pMXE	0.5	50	50	ENSMUST00000151673.2	ENSMUSG00000027309.19	4930402H24Rik	chr2	protein_coding	RIKEN cDNA 4930402H24 gene
chr2	130619201	130620337	-	130619422	130620337	3pMXE	0.5	50	50	ENSMUST00000123049.8	ENSMUSG00000027309.19	4930402H24Rik	chr2	protein_coding	RIKEN cDNA 4930402H24 gene
chr2	130654861	130662389	-	130654861	130656099	5pMXE	0.5	50	50	ENSMUST00000142128.2	ENSMUSG00000027309.19	4930402H24Rik	chr2	protein_coding	RIKEN cDNA 4930402H24 gene
chr2	130654861;130662508	130662389;130681884	-	130654861;130656223	130656099;130681884	MXE	0.5	100	100	ENSMUST00000120316.8	ENSMUSG00000027309.19	4930402H24Rik	chr2	protein_coding	RIKEN cDNA 4930402H24 gene
chr2	130656223;130662508	130662389;130681884	-	130656223	130681884	cassetteExon	0.5	100	100	ENSMUST00000120316.8	ENSMUSG00000027309.19	4930402H24Rik	chr2	protein_coding	RIKEN cDNA 4930402H24 gene
chr2	130664420	130681884	-	130656223	130681884	A3SS	0.33	50	50	ENSMUST00000120316.8	ENSMUSG00000027309.19	4930402H24Rik	chr2	protein_coding	RIKEN cDNA 4930402H24 gene
chr2	130717676	130748131	-	130664420	130748131	A3SS	0.33	50	50	ENSMUST00000146975.2	ENSMUSG00000027309.19	4930402H24Rik	chr2	protein_coding	RIKEN cDNA 4930402H24 gene
chr2	130725907	130748131	-	130664420	130748131	A3SS	0.33	50	50	ENSMUST00000146975.2	ENSMUSG00000027309.19	4930402H24Rik	chr2	protein_coding	RIKEN cDNA 4930402H24 gene
chr2	130662508	130681884	-	130662508	130664341	A5SS&ES	0.5	50	50	ENSMUST00000146975.2	ENSMUSG00000027309.19	4930402H24Rik	chr2	protein_coding	RIKEN cDNA 4930402H24 gene
chr2	130725907	130748131	-	130717676	130748131	A3SS	0.33	50	50	ENSMUST00000135110.2	ENSMUSG00000085566.2	A730017L22Rik	chr2	lncRNA	RIKEN cDNA A730017L22 gene
chr2	130882178	130882319	-	130882245	130882319	A3SS	0.5	50	50	ENSMUST00000110240.10	ENSMUSG00000027316.16	Gfra4	chr2	protein_coding	glial cell line derived neurotrophic factor family receptor alpha 4
chr2	130883678	130884530	-	130883678	130884963	A5SS	0.5	50	50	ENSMUST00000110240.10	ENSMUSG00000027316.16	Gfra4	chr2	protein_coding	glial cell line derived neurotrophic factor family receptor alpha 4
chr2	130893470;130895070	130894738;130895310	-	130893470	130895310	cassetteExon	0.5	100	100	ENSMUST00000128828.8	ENSMUSG00000027318.18	Adam33	chr2	protein_coding	a disintegrin and metallopeptidase domain 33
chr2	130893470;130895220	130894738;130895310	-	130893470	130895310	cassetteExon	0.5	100	100	ENSMUST00000128828.8	ENSMUSG00000027318.18	Adam33	chr2	protein_coding	a disintegrin and metallopeptidase domain 33
chr2	130893470;130895238	130894738;130895310	-	130893470	130895310	cassetteExon	0.5	100	100	ENSMUST00000128828.8	ENSMUSG00000027318.18	Adam33	chr2	protein_coding	a disintegrin and metallopeptidase domain 33
chr2	130895070	130895310	-	130895070;130895220	130895143;130895310	ES	0.25	50	50	ENSMUST00000110232.9	ENSMUSG00000027318.18	Adam33	chr2	protein_coding	a disintegrin and metallopeptidase domain 33
chr2	130895713	130896192	-	130895713;130896033	130895838;130896192	ES	0.5	50	50	ENSMUST00000110232.9	ENSMUSG00000027318.18	Adam33	chr2	protein_coding	a disintegrin and metallopeptidase domain 33
chr2	130903142;130904495	130904449;130905335	-	130903142	130905335	cassetteExon	0.5	100	100	ENSMUST00000110232.9	ENSMUSG00000027318.18	Adam33	chr2	protein_coding	a disintegrin and metallopeptidase domain 33
chr2	130895238	130895310	-	130895220	130895310	A3SS	0.25	50	50	ENSMUST00000110232.9	ENSMUSG00000027318.18	Adam33	chr2	protein_coding	a disintegrin and metallopeptidase domain 33
chr2	130900310	130900582	-	130898712	130900582	A3SS	0.5	50	50	ENSMUST00000110232.9	ENSMUSG00000027318.18	Adam33	chr2	protein_coding	a disintegrin and metallopeptidase domain 33
chr2	130895713	130896126	-	130895713	130895838	A5SS&ES	0.33	50	50	ENSMUST00000110232.9	ENSMUSG00000027318.18	Adam33	chr2	protein_coding	a disintegrin and metallopeptidase domain 33
chr2	130897747	130897871	-	130897747	130897834	A5SS	0.5	50	50	ENSMUST00000110232.9	ENSMUSG00000027318.18	Adam33	chr2	protein_coding	a disintegrin and metallopeptidase domain 33
chr2	130893470	130895310	-	130893470	130894738	A5SS&ES	0.5	50	50	ENSMUST00000132436.8	ENSMUSG00000027318.18	Adam33	chr2	protein_coding	a disintegrin and metallopeptidase domain 33
chr2	130895070;130895238	130895143;130895310	-	130895070	130895310	cassetteExon	0.5	100	100	ENSMUST00000052104.10	ENSMUSG00000027318.18	Adam33	chr2	protein_coding	a disintegrin and metallopeptidase domain 33
chr2	130895070	130895310	-	130895070	130895143	A5SS	0.5	50	50	ENSMUST00000134742.8	ENSMUSG00000027318.18	Adam33	chr2	protein_coding	a disintegrin and metallopeptidase domain 33
chr2	130895713	130896126	-	130895713	130896192	A5SS	0.33	50	50	ENSMUST00000184921.8	ENSMUSG00000027318.18	Adam33	chr2	protein_coding	a disintegrin and metallopeptidase domain 33
chr2	130893470	130895310	-	130895238	130895310	3pMXE	0.25	50	50	ENSMUST00000149625.8	ENSMUSG00000027318.18	Adam33	chr2	protein_coding	a disintegrin and metallopeptidase domain 33
chr2	130895070	130895310	-	130895238	130895310	A3SS	0.25	50	50	ENSMUST00000149625.8	ENSMUSG00000027318.18	Adam33	chr2	protein_coding	a disintegrin and metallopeptidase domain 33
chr2	130895713	130896192	-	130895713	130895838	5pMXE	0.33	50	50	ENSMUST00000127343.8	ENSMUSG00000027318.18	Adam33	chr2	protein_coding	a disintegrin and metallopeptidase domain 33
chr2	130903142	130905335	-	130904495	130905335	3pMXE	0.5	50	50	ENSMUST00000124481.2	ENSMUSG00000027318.18	Adam33	chr2	protein_coding	a disintegrin and metallopeptidase domain 33
chr2	130976042	130978860	+	130976042;130977812	130977715;130978860	ES	0.5	50	50	ENSMUST00000099349.10	ENSMUSG00000074793.11	Hspa12b	chr2	protein_coding	heat shock protein 12B
chr2	130990214	130993538	-	130990214;130991462	130991361;130993538	ES	0.5	50	50	ENSMUST00000184535.8	ENSMUSG00000027327.17	1700037H04Rik	chr2	protein_coding	RIKEN cDNA 1700037H04 gene
chr2	130995630;130997699	130997562;131001873	-	130995630	131001873	cassetteExon	0.5	100	100	ENSMUST00000184535.8	ENSMUSG00000027327.17	1700037H04Rik	chr2	protein_coding	RIKEN cDNA 1700037H04 gene
chr2	130993676	130995514	-	130993680	130995514	A3SS	0.5	50	50	ENSMUST00000184535.8	ENSMUSG00000027327.17	1700037H04Rik	chr2	protein_coding	RIKEN cDNA 1700037H04 gene
chr2	130993680	130995505	-	130993680	130995514	A5SS	0.5	50	50	ENSMUST00000184535.8	ENSMUSG00000027327.17	1700037H04Rik	chr2	protein_coding	RIKEN cDNA 1700037H04 gene
chr2	131013869	131014124	-	131013945	131014124	A3SS	0.5	50	50	ENSMUST00000028801.8	ENSMUSG00000027329.10	Spef1	chr2	protein_coding	sperm flagellar 1
chr2	131033686	131034477	+	131033855	131034477	A5SS&ES	0.5	50	50	ENSMUST00000028804.15	ENSMUSG00000027330.17	Cdc25b	chr2	protein_coding	cell division cycle 25B
chr2	131049066	131054367	+	131049066	131053183	3pMXE	0.5	50	50	ENSMUST00000143546.2	ENSMUSG00000068264.12	Ap5s1	chr2	protein_coding	adaptor-related protein 5 complex, sigma 1 subunit
chr2	131052601	131053183	+	131049066	131053183	A5SS	0.5	50	50	ENSMUST00000143546.2	ENSMUSG00000068264.12	Ap5s1	chr2	protein_coding	adaptor-related protein 5 complex, sigma 1 subunit
chr2	131049066;131053393	131053183;131054367	+	131049066	131054367	cassetteExon	0.5	100	100	ENSMUST00000153097.3	ENSMUSG00000068264.12	Ap5s1	chr2	protein_coding	adaptor-related protein 5 complex, sigma 1 subunit
chr2	131052601	131054367	+	131049066	131054367	A5SS	0.33	50	50	ENSMUST00000153097.3	ENSMUSG00000068264.12	Ap5s1	chr2	protein_coding	adaptor-related protein 5 complex, sigma 1 subunit
chr2	131052601;131053393	131053183;131054367	+	131052601	131054367	cassetteExon	0.5	100	100	ENSMUST00000134086.2	ENSMUSG00000068264.12	Ap5s1	chr2	protein_coding	adaptor-related protein 5 complex, sigma 1 subunit
chr2	131052601	131054371	+	131052601	131054367	A3SS	0.33	50	50	ENSMUST00000134086.2	ENSMUSG00000068264.12	Ap5s1	chr2	protein_coding	adaptor-related protein 5 complex, sigma 1 subunit
chr2	131052601;131053393	131053183;131054371	+	131052601	131054371	cassetteExon	0.5	100	100	ENSMUST00000153901.2	ENSMUSG00000068264.12	Ap5s1	chr2	protein_coding	adaptor-related protein 5 complex, sigma 1 subunit
chr2	131052601	131054371	+	131052601	131053183	A3SS&ES	0.33	50	50	ENSMUST00000110210.8	ENSMUSG00000068264.12	Ap5s1	chr2	protein_coding	adaptor-related protein 5 complex, sigma 1 subunit
chr2	131053393	131054371	+	131053393	131054367	A3SS	0.5	50	50	ENSMUST00000110210.8	ENSMUSG00000068264.12	Ap5s1	chr2	protein_coding	adaptor-related protein 5 complex, sigma 1 subunit
chr2	131054656	131054746	+	131054656	131055090	A3SS	0.5	50	50	ENSMUST00000110210.8	ENSMUSG00000068264.12	Ap5s1	chr2	protein_coding	adaptor-related protein 5 complex, sigma 1 subunit
chr2	131052601	131054367	+	131052601	131053183	A3SS&ES	0.33	50	50	ENSMUST00000110206.2	ENSMUSG00000068264.12	Ap5s1	chr2	protein_coding	adaptor-related protein 5 complex, sigma 1 subunit
chr2	131080830	131082235	+	131080830;131081462	131081372;131082235	ES	0.5	50	50	ENSMUST00000130597.8	ENSMUSG00000037523.14	Mavs	chr2	protein_coding	mitochondrial antiviral signaling protein
chr2	131076275	131080656	+	131076047	131080656	A5SS	0.5	50	50	ENSMUST00000130597.8	ENSMUSG00000037523.14	Mavs	chr2	protein_coding	mitochondrial antiviral signaling protein
chr2	131084737	131085039	+	131083969	131085039	A5SS	0.5	50	50	ENSMUST00000130597.8	ENSMUSG00000037523.14	Mavs	chr2	protein_coding	mitochondrial antiviral signaling protein
chr2	131116183	131124512	+	131116183;131122330	131122077;131124512	ES	0.5	50	50	ENSMUST00000131779.8	ENSMUSG00000037514.19	Pank2	chr2	protein_coding	pantothenate kinase 2
chr2	131124688	131129394	+	131124688	131125159	3pMXE	0.5	50	50	ENSMUST00000131779.8	ENSMUSG00000037514.19	Pank2	chr2	protein_coding	pantothenate kinase 2
chr2	131113571	131115831	+	131104735	131115831	A5SS	0.5	50	50	ENSMUST00000131779.8	ENSMUSG00000037514.19	Pank2	chr2	protein_coding	pantothenate kinase 2
chr2	131116040	131122077	+	131116183	131122077	A5SS	0.5	50	50	ENSMUST00000131779.8	ENSMUSG00000037514.19	Pank2	chr2	protein_coding	pantothenate kinase 2
chr2	131129517;131130605	131130502;131135319	+	131129517	131135319	cassetteExon	0.5	100	100	ENSMUST00000150843.9	ENSMUSG00000037514.19	Pank2	chr2	protein_coding	pantothenate kinase 2
chr2	131116040	131129394	+	131124688	131129394	A5SS&ES	0.33	50	50	ENSMUST00000150843.9	ENSMUSG00000037514.19	Pank2	chr2	protein_coding	pantothenate kinase 2
chr2	131116183	131124512	+	131122330	131124512	A5SS&ES	0.5	50	50	ENSMUST00000184105.9	ENSMUSG00000037514.19	Pank2	chr2	protein_coding	pantothenate kinase 2
chr2	131116183	131129394	+	131124688	131129394	A5SS&ES	0.33	50	50	ENSMUST00000184105.9	ENSMUSG00000037514.19	Pank2	chr2	protein_coding	pantothenate kinase 2
chr2	131116183	131135319	+	131129517	131135319	A5SS&ES	0.33	50	50	ENSMUST00000184105.9	ENSMUSG00000037514.19	Pank2	chr2	protein_coding	pantothenate kinase 2
chr2	131116040	131122077	+	131116040	131129394	A3SS	0.5	50	50	ENSMUST00000184932.9	ENSMUSG00000037514.19	Pank2	chr2	protein_coding	pantothenate kinase 2
chr2	131116183	131129394	+	131116040	131129394	A5SS	0.33	50	50	ENSMUST00000184932.9	ENSMUSG00000037514.19	Pank2	chr2	protein_coding	pantothenate kinase 2
chr2	131116183;131129517	131129394;131135319	+	131116183	131135319	cassetteExon	0.5	100	100	ENSMUST00000145904.2	ENSMUSG00000037514.19	Pank2	chr2	protein_coding	pantothenate kinase 2
chr2	131116183	131122077	+	131116183	131135319	A3SS	0.25	50	50	ENSMUST00000145904.2	ENSMUSG00000037514.19	Pank2	chr2	protein_coding	pantothenate kinase 2
chr2	131116183	131124512	+	131116183	131135319	A3SS	0.25	50	50	ENSMUST00000145904.2	ENSMUSG00000037514.19	Pank2	chr2	protein_coding	pantothenate kinase 2
chr2	131130605	131135319	+	131116183	131135319	A5SS	0.33	50	50	ENSMUST00000145904.2	ENSMUSG00000037514.19	Pank2	chr2	protein_coding	pantothenate kinase 2
chr2	131116183;131124688	131124512;131129394	+	131116183	131129394	cassetteExon	0.5	100	100	ENSMUST00000183388.2	ENSMUSG00000037514.19	Pank2	chr2	protein_coding	pantothenate kinase 2
chr2	131116183	131122077	+	131116183	131129394	A3SS	0.25	50	50	ENSMUST00000183388.2	ENSMUSG00000037514.19	Pank2	chr2	protein_coding	pantothenate kinase 2
chr2	131146251;131146694	131146606;131147572	-	131146251	131147572	cassetteExon	0.5	100	100	ENSMUST00000059372.11	ENSMUSG00000048911.16	Rnf24	chr2	protein_coding	ring finger protein 24
chr2	131155232	131170794	-	131155232	131194656	A5SS	0.5	50	50	ENSMUST00000059372.11	ENSMUSG00000048911.16	Rnf24	chr2	protein_coding	ring finger protein 24
chr2	131358363	131366663	+	131358363	131362015	3pMXE	0.5	50	50	ENSMUST00000129143.8	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131354137	131358118	+	131354137	131358137	A3SS	0.5	50	50	ENSMUST00000129143.8	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131333956	131353904	+	131333573	131353904	A5SS	0.25	50	50	ENSMUST00000129143.8	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131334403	131353904	+	131333573	131353904	A5SS	0.25	50	50	ENSMUST00000129143.8	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131350966	131353904	+	131333573	131353904	A5SS	0.25	50	50	ENSMUST00000129143.8	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131362188	131363979	+	131362188;131363091	131362332;131363979	ES	0.5	50	50	ENSMUST00000028806.12	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131363091	131366663	+	131363091;131364139	131363979;131366663	ES	0.2	50	50	ENSMUST00000028806.12	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131364139;131366253	131366164;131366663	+	131364139	131366663	cassetteExon	0.5	100	100	ENSMUST00000028806.12	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131362188	131362842	+	131362188	131362332	A3SS	0.2	50	50	ENSMUST00000028806.12	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131362188	131362975	+	131362188	131362332	A3SS	0.2	50	50	ENSMUST00000028806.12	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131363091	131364068	+	131363091	131363979	A3SS	0.33	50	50	ENSMUST00000028806.12	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131334403	131353904	+	131333956	131353904	A5SS	0.25	50	50	ENSMUST00000028806.12	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131350966	131353904	+	131333956	131353904	A5SS	0.25	50	50	ENSMUST00000028806.12	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131362188	131363979	+	131362188;131363091	131362975;131363979	ES	0.5	50	50	ENSMUST00000183947.8	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131362188;131362566	131362332;131362975	+	131362188	131362975	cassetteExon	0.5	100	100	ENSMUST00000183947.8	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131362188	131362842	+	131362188	131362975	A3SS	0.2	50	50	ENSMUST00000183947.8	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131362188	131366663	+	131362188;131364139	131363979;131366663	ES	0.2	50	50	ENSMUST00000110179.9	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131362188;131363091	131362842;131363979	+	131362188	131363979	cassetteExon	0.5	100	100	ENSMUST00000110179.9	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131362188;131363091	131362842;131366663	+	131362188;131364139	131363979;131366663	MXE	0.5	100	100	ENSMUST00000110179.9	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131362188;131363091	131362975;131366663	+	131362188;131364139	131363979;131366663	MXE	0.5	100	100	ENSMUST00000110179.9	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131362188	131362332	+	131362188	131363979	A3SS	0.2	50	50	ENSMUST00000110179.9	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131362188	131363979	+	131363091	131363979	A5SS	0.5	50	50	ENSMUST00000151627.8	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131362188	131366663	+	131364139	131366663	A5SS&ES	0.2	50	50	ENSMUST00000151627.8	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131362188	131366663	+	131362188;131363091	131362332;131366663	ES	0.2	50	50	ENSMUST00000110189.9	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131362188;131364139	131363979;131366663	+	131362188;131363091	131362332;131366663	MXE	0.5	100	100	ENSMUST00000110189.9	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131363091;131364139	131364068;131366663	+	131363091	131366663	cassetteExon	0.5	100	100	ENSMUST00000110189.9	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131366253	131366663	+	131363091	131366663	A5SS	0.2	50	50	ENSMUST00000110189.9	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131358363;131362188	131362015;131366663	+	131358363	131366663	cassetteExon	0.5	100	100	ENSMUST00000110182.9	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131363091	131366663	+	131358363	131366663	A5SS	0.2	50	50	ENSMUST00000110182.9	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131364139	131366663	+	131358363	131366663	A5SS	0.2	50	50	ENSMUST00000110182.9	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131366253	131366663	+	131358363	131366663	A5SS	0.2	50	50	ENSMUST00000110182.9	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131362188;131363091	131362842;131366663	+	131362188	131366663	cassetteExon	0.5	100	100	ENSMUST00000110183.9	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131362188;131363091	131362975;131366663	+	131362188	131366663	cassetteExon	0.5	100	100	ENSMUST00000110183.9	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131362188	131362332	+	131362188	131366663	A3SS	0.2	50	50	ENSMUST00000110183.9	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131366253	131366663	+	131362188	131366663	A5SS	0.2	50	50	ENSMUST00000110183.9	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131350966	131353904	+	131334403	131353904	A5SS	0.25	50	50	ENSMUST00000131698.2	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131362188;131363091	131362842;131366663	+	131362188;131366253	131363979;131366663	MXE	0.5	100	100	ENSMUST00000183881.2	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131362188;131363091	131362975;131366663	+	131362188;131366253	131363979;131366663	MXE	0.5	100	100	ENSMUST00000183881.2	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131363091	131366663	+	131364139	131366663	5pMXE	0.2	50	50	ENSMUST00000151143.2	ENSMUSG00000027333.19	Smox	chr2	protein_coding	spermine oxidase
chr2	131678402;131687091	131687024;131689492	-	131678402	131689492	cassetteExon	0.5	100	100	ENSMUST00000143453.2	ENSMUSG00000086822.3	5330413P13Rik	chr2	lncRNA	RIKEN cDNA 5330413P13 gene
chr2	131671235	131678356	-	131665424	131678356	A3SS	0.5	50	50	ENSMUST00000143453.2	ENSMUSG00000086822.3	5330413P13Rik	chr2	lncRNA	RIKEN cDNA 5330413P13 gene
chr2	131687638	131689492	-	131678402	131689492	A3SS	0.25	50	50	ENSMUST00000143453.2	ENSMUSG00000086822.3	5330413P13Rik	chr2	lncRNA	RIKEN cDNA 5330413P13 gene
chr2	131687773	131689492	-	131678402	131689492	A3SS	0.25	50	50	ENSMUST00000143453.2	ENSMUSG00000086822.3	5330413P13Rik	chr2	lncRNA	RIKEN cDNA 5330413P13 gene
chr2	131687638	131689492	-	131687091	131689492	A3SS	0.25	50	50	ENSMUST00000210606.2	ENSMUSG00000086822.3	5330413P13Rik	chr2	lncRNA	RIKEN cDNA 5330413P13 gene
chr2	131687773	131689492	-	131687091	131689492	A3SS	0.25	50	50	ENSMUST00000210606.2	ENSMUSG00000086822.3	5330413P13Rik	chr2	lncRNA	RIKEN cDNA 5330413P13 gene
chr2	131678402	131689492	-	131678402;131687638	131687024;131689492	ES	0.25	50	50	ENSMUST00000210961.2	ENSMUSG00000086822.3	5330413P13Rik	chr2	lncRNA	RIKEN cDNA 5330413P13 gene
chr2	131687773	131689492	-	131687638	131689492	A3SS	0.25	50	50	ENSMUST00000210961.2	ENSMUSG00000086822.3	5330413P13Rik	chr2	lncRNA	RIKEN cDNA 5330413P13 gene
chr2	131754212	131788291	+	131754212	131778340	3pMXE	0.33	50	50	ENSMUST00000091288.13	ENSMUSG00000079037.10	Prnp	chr2	protein_coding	prion protein
chr2	131754212	131759306	+	131754212	131778340	A3SS	0.33	50	50	ENSMUST00000091288.13	ENSMUSG00000079037.10	Prnp	chr2	protein_coding	prion protein
chr2	131754212	131759306	+	131754212	131788291	A3SS	0.33	50	50	ENSMUST00000124100.8	ENSMUSG00000098754.8	Prn	chr2	protein_coding	prion protein readthrough transcript
chr2	131795502	131796711	+	131795502	131796741	A3SS	0.5	50	50	ENSMUST00000124100.8	ENSMUSG00000098754.8	Prn	chr2	protein_coding	prion protein readthrough transcript
chr2	131792835	131794929	+	131788393	131794929	A5SS	0.33	50	50	ENSMUST00000124100.8	ENSMUSG00000098754.8	Prn	chr2	protein_coding	prion protein readthrough transcript
chr2	131792990	131794929	+	131788393	131794929	A5SS	0.33	50	50	ENSMUST00000124100.8	ENSMUSG00000098754.8	Prn	chr2	protein_coding	prion protein readthrough transcript
chr2	131792990	131794929	+	131792835	131794929	A5SS	0.33	50	50	ENSMUST00000110170.8	ENSMUSG00000027338.17	Prnd	chr2	protein_coding	prion like protein doppel
chr2	131854572	131872079	-	131854572	131871671	5pMXE	0.2	50	50	ENSMUST00000028814.15	ENSMUSG00000027339.16	Rassf2	chr2	protein_coding	Ras association (RalGDS/AF-6) domain family member 2
chr2	131854572	131863000	-	131854572	131871671	A5SS	0.2	50	50	ENSMUST00000028814.15	ENSMUSG00000027339.16	Rassf2	chr2	protein_coding	Ras association (RalGDS/AF-6) domain family member 2
chr2	131854572	131870803	-	131854572	131871671	A5SS	0.2	50	50	ENSMUST00000028814.15	ENSMUSG00000027339.16	Rassf2	chr2	protein_coding	Ras association (RalGDS/AF-6) domain family member 2
chr2	131854572	131871612	-	131854572	131871671	A5SS	0.2	50	50	ENSMUST00000028814.15	ENSMUSG00000027339.16	Rassf2	chr2	protein_coding	Ras association (RalGDS/AF-6) domain family member 2
chr2	131854572;131871796	131871612;131872079	-	131854572	131872079	cassetteExon	0.5	100	100	ENSMUST00000103182.8	ENSMUSG00000027339.16	Rassf2	chr2	protein_coding	Ras association (RalGDS/AF-6) domain family member 2
chr2	131854572;131871796	131871671;131872079	-	131854572	131872079	cassetteExon	0.5	100	100	ENSMUST00000103182.8	ENSMUSG00000027339.16	Rassf2	chr2	protein_coding	Ras association (RalGDS/AF-6) domain family member 2
chr2	131854572	131863000	-	131854572	131872079	A5SS	0.2	50	50	ENSMUST00000103182.8	ENSMUSG00000027339.16	Rassf2	chr2	protein_coding	Ras association (RalGDS/AF-6) domain family member 2
chr2	131854572	131870803	-	131854572	131872079	A5SS	0.2	50	50	ENSMUST00000103182.8	ENSMUSG00000027339.16	Rassf2	chr2	protein_coding	Ras association (RalGDS/AF-6) domain family member 2
chr2	131854572	131870803	-	131854572	131863000	5pMXE	0.2	50	50	ENSMUST00000155829.2	ENSMUSG00000027339.16	Rassf2	chr2	protein_coding	Ras association (RalGDS/AF-6) domain family member 2
chr2	131854572	131871612	-	131854572	131863000	5pMXE	0.2	50	50	ENSMUST00000155829.2	ENSMUSG00000027339.16	Rassf2	chr2	protein_coding	Ras association (RalGDS/AF-6) domain family member 2
chr2	131854572	131870803	-	131854572	131871612	A5SS	0.2	50	50	ENSMUST00000139047.8	ENSMUSG00000027339.16	Rassf2	chr2	protein_coding	Ras association (RalGDS/AF-6) domain family member 2
chr2	131919413	131931016	-	131919413;131920421	131920333;131931016	ES	0.5	50	50	ENSMUST00000028815.15	ENSMUSG00000027340.16	Slc23a2	chr2	protein_coding	solute carrier family 23 (nucleobase transporters), member 2
chr2	131936160	131936425	-	131936160	131943392	A5SS	0.5	50	50	ENSMUST00000028815.15	ENSMUSG00000027340.16	Slc23a2	chr2	protein_coding	solute carrier family 23 (nucleobase transporters), member 2
chr2	131943646	131953262	-	131943646	131986932	A5SS	0.5	50	50	ENSMUST00000028815.15	ENSMUSG00000027340.16	Slc23a2	chr2	protein_coding	solute carrier family 23 (nucleobase transporters), member 2
chr2	132087292	132087876	-	132086061	132087876	A3SS	0.5	50	50	ENSMUST00000110164.8	ENSMUSG00000027341.11	Tmem230	chr2	protein_coding	transmembrane protein 230
chr2	132087994	132089493	-	132087994	132089516	A5SS	0.33	50	50	ENSMUST00000110163.8	ENSMUSG00000027341.11	Tmem230	chr2	protein_coding	transmembrane protein 230
chr2	132087994	132089553	-	132087994	132089516	A5SS	0.33	50	50	ENSMUST00000110163.8	ENSMUSG00000027341.11	Tmem230	chr2	protein_coding	transmembrane protein 230
chr2	132087994	132089553	-	132087994	132089493	A5SS	0.33	50	50	ENSMUST00000028816.9	ENSMUSG00000027341.11	Tmem230	chr2	protein_coding	transmembrane protein 230
chr2	132093920	132094310	-	132093920	132094736	A5SS	0.5	50	50	ENSMUST00000028817.7	ENSMUSG00000027342.15	Pcna	chr2	protein_coding	proliferating cell nuclear antigen
chr2	132105417	132136304	+	132105417;132135301	132135165;132136304	ES	0.5	50	50	ENSMUST00000110158.8	ENSMUSG00000058793.15	Cds2	chr2	protein_coding	CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
chr2	132127163	132135165	+	132105417	132135165	A5SS	0.33	50	50	ENSMUST00000110158.8	ENSMUSG00000058793.15	Cds2	chr2	protein_coding	CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
chr2	132127885	132135165	+	132105417	132135165	A5SS	0.33	50	50	ENSMUST00000110158.8	ENSMUSG00000058793.15	Cds2	chr2	protein_coding	CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
chr2	132146876	132147004	+	132146876	132147073	A3SS	0.5	50	50	ENSMUST00000103181.11	ENSMUSG00000058793.15	Cds2	chr2	protein_coding	CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
chr2	132127885	132135165	+	132127163	132135165	A5SS	0.33	50	50	ENSMUST00000125060.2	ENSMUSG00000058793.15	Cds2	chr2	protein_coding	CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
chr2	132223670;132226862	132226731;132227176	-	132223670	132227176	cassetteExon	0.5	100	100	ENSMUST00000110157.9	ENSMUSG00000050558.14	Prokr2	chr2	protein_coding	prokineticin receptor 2
chr2	132216010	132223092	-	132182906	132223092	A3SS	0.5	50	50	ENSMUST00000110157.9	ENSMUSG00000050558.14	Prokr2	chr2	protein_coding	prokineticin receptor 2
chr2	132216010	132227176	-	132223670	132227176	A3SS&ES	0.33	50	50	ENSMUST00000110157.9	ENSMUSG00000050558.14	Prokr2	chr2	protein_coding	prokineticin receptor 2
chr2	132223670	132227180	-	132223670	132227176	A5SS	0.33	50	50	ENSMUST00000110157.9	ENSMUSG00000050558.14	Prokr2	chr2	protein_coding	prokineticin receptor 2
chr2	132216010	132227176	-	132216010;132223670	132223092;132227176	ES	0.33	50	50	ENSMUST00000049997.14	ENSMUSG00000050558.14	Prokr2	chr2	protein_coding	prokineticin receptor 2
chr2	132226862	132227176	-	132216010	132227176	A3SS	0.33	50	50	ENSMUST00000142766.2	ENSMUSG00000050558.14	Prokr2	chr2	protein_coding	prokineticin receptor 2
chr2	132216010	132223092	-	132216010	132227176	A5SS	0.5	50	50	ENSMUST00000142766.2	ENSMUSG00000050558.14	Prokr2	chr2	protein_coding	prokineticin receptor 2
chr2	132223670	132227180	-	132223670	132226731	A5SS&ES	0.33	50	50	ENSMUST00000110156.2	ENSMUSG00000050558.14	Prokr2	chr2	protein_coding	prokineticin receptor 2
chr2	132339411	132353995	+	132339411;132347791	132347681;132353995	ES	0.25	50	50	ENSMUST00000151417.8	ENSMUSG00000086379.8	1700026D11Rik	chr2	lncRNA	RIKEN cDNA 1700026D11 gene
chr2	132332717	132339289	+	132332883	132339289	A5SS	0.5	50	50	ENSMUST00000151417.8	ENSMUSG00000086379.8	1700026D11Rik	chr2	lncRNA	RIKEN cDNA 1700026D11 gene
chr2	132350194	132353995	+	132347791	132353995	A5SS	0.25	50	50	ENSMUST00000151417.8	ENSMUSG00000086379.8	1700026D11Rik	chr2	lncRNA	RIKEN cDNA 1700026D11 gene
chr2	132332717;132339411	132339289;132353995	+	132332717;132350194	132350126;132353995	MXE	0.5	100	100	ENSMUST00000130884.8	ENSMUSG00000086379.8	1700026D11Rik	chr2	lncRNA	RIKEN cDNA 1700026D11 gene
chr2	132332883	132353995	+	132350194	132353995	A5SS&ES	0.25	50	50	ENSMUST00000130884.8	ENSMUSG00000086379.8	1700026D11Rik	chr2	lncRNA	RIKEN cDNA 1700026D11 gene
chr2	132332883	132353995	+	132339411	132353995	A5SS&ES	0.25	50	50	ENSMUST00000126910.8	ENSMUSG00000086379.8	1700026D11Rik	chr2	lncRNA	RIKEN cDNA 1700026D11 gene
chr2	132332883;132339411	132339289;132353995	+	132332883	132353995	cassetteExon	0.5	100	100	ENSMUST00000154067.8	ENSMUSG00000086379.8	1700026D11Rik	chr2	lncRNA	RIKEN cDNA 1700026D11 gene
chr2	132347791	132353995	+	132332883	132353995	A5SS	0.25	50	50	ENSMUST00000154067.8	ENSMUSG00000086379.8	1700026D11Rik	chr2	lncRNA	RIKEN cDNA 1700026D11 gene
chr2	132350194	132353995	+	132339411	132353995	A5SS	0.25	50	50	ENSMUST00000146398.2	ENSMUSG00000086379.8	1700026D11Rik	chr2	lncRNA	RIKEN cDNA 1700026D11 gene
chr2	132378670;132379779	132379667;132380002	-	132378670	132380002	cassetteExon	0.5	100	100	ENSMUST00000127712.8	ENSMUSG00000027346.16	Gpcpd1	chr2	protein_coding	glycerophosphocholine phosphodiesterase 1
chr2	132406631	132414105	-	132406631;132410636	132410540;132414105	ES	0.5	50	50	ENSMUST00000148833.8	ENSMUSG00000027346.16	Gpcpd1	chr2	protein_coding	glycerophosphocholine phosphodiesterase 1
chr2	132414174	132429541	-	132414174	132419988	5pMXE	0.5	50	50	ENSMUST00000148833.8	ENSMUSG00000027346.16	Gpcpd1	chr2	protein_coding	glycerophosphocholine phosphodiesterase 1
chr2	132392474;132396000	132395877;132398855	-	132392474	132398855	cassetteExon	0.5	100	100	ENSMUST00000148833.8	ENSMUSG00000027346.16	Gpcpd1	chr2	protein_coding	glycerophosphocholine phosphodiesterase 1
chr2	132398896;132400602	132400527;132406547	-	132398896	132406547	cassetteExon	0.5	100	100	ENSMUST00000148833.8	ENSMUSG00000027346.16	Gpcpd1	chr2	protein_coding	glycerophosphocholine phosphodiesterase 1
chr2	132414177	132419988	-	132414174	132419988	A3SS	0.5	50	50	ENSMUST00000148833.8	ENSMUSG00000027346.16	Gpcpd1	chr2	protein_coding	glycerophosphocholine phosphodiesterase 1
chr2	132392474	132398855	-	132396000	132398855	3pMXE	0.5	50	50	ENSMUST00000110135.3	ENSMUSG00000027346.16	Gpcpd1	chr2	protein_coding	glycerophosphocholine phosphodiesterase 1
chr2	132489985	132494716	+	132489985	132491074	3pMXE	0.5	50	50	ENSMUST00000143964.8	ENSMUSG00000074783.11	AU019990	chr2	lncRNA	expressed sequence AU019990
chr2	132444936	132456302	+	132444936	132489886	A3SS	0.5	50	50	ENSMUST00000143964.8	ENSMUSG00000074783.11	AU019990	chr2	lncRNA	expressed sequence AU019990
chr2	132440325	132444797	+	132440485	132444797	A5SS	0.5	50	50	ENSMUST00000143964.8	ENSMUSG00000074783.11	AU019990	chr2	lncRNA	expressed sequence AU019990
chr2	132459674	132489886	+	132444936	132489886	A5SS	0.33	50	50	ENSMUST00000143964.8	ENSMUSG00000074783.11	AU019990	chr2	lncRNA	expressed sequence AU019990
chr2	132487977	132489886	+	132444936	132489886	A5SS	0.33	50	50	ENSMUST00000143964.8	ENSMUSG00000074783.11	AU019990	chr2	lncRNA	expressed sequence AU019990
chr2	132487977	132489886	+	132459674	132489886	A5SS	0.33	50	50	ENSMUST00000153028.8	ENSMUSG00000074783.11	AU019990	chr2	lncRNA	expressed sequence AU019990
chr2	132532148	132533870	+	132528901	132533870	A5SS	0.33	50	50	ENSMUST00000061891.11	ENSMUSG00000044991.11	Shld1	chr2	protein_coding	shieldin complex subunit 1
chr2	132532648	132533870	+	132528901	132533870	A5SS	0.33	50	50	ENSMUST00000061891.11	ENSMUSG00000044991.11	Shld1	chr2	protein_coding	shieldin complex subunit 1
chr2	132540561	132592133	+	132534051	132592133	A5SS	0.5	50	50	ENSMUST00000061891.11	ENSMUSG00000044991.11	Shld1	chr2	protein_coding	shieldin complex subunit 1
chr2	132532648	132533870	+	132532148	132533870	A5SS	0.33	50	50	ENSMUST00000148271.8	ENSMUSG00000044991.11	Shld1	chr2	protein_coding	shieldin complex subunit 1
chr2	132651873	132652126	-	132651873	132652007	A5SS	0.5	50	50	ENSMUST00000152836.7	ENSMUSG00000037376.15	Trmt6	chr2	protein_coding	tRNA methyltransferase 6
chr2	132654095	132657551	-	132654095	132657724	A5SS	0.5	50	50	ENSMUST00000039554.7	ENSMUSG00000037376.15	Trmt6	chr2	protein_coding	tRNA methyltransferase 6
chr2	132659165	132661523	+	132659165;132659708	132659625;132661523	ES	0.5	50	50	ENSMUST00000028831.15	ENSMUSG00000027353.15	Mcm8	chr2	protein_coding	minichromosome maintenance 8 homologous recombination repair factor
chr2	132659165	132661523	+	132659165	132659625	3pMXE	0.5	50	50	ENSMUST00000135685.2	ENSMUSG00000027353.15	Mcm8	chr2	protein_coding	minichromosome maintenance 8 homologous recombination repair factor
chr2	132691923	132703129	+	132691923;132696942	132696813;132703129	ES	0.5	50	50	ENSMUST00000028835.13	ENSMUSG00000027357.17	Crls1	chr2	protein_coding	cardiolipin synthase 1
chr2	132689800	132691786	+	132689045	132691786	A5SS	0.33	50	50	ENSMUST00000028835.13	ENSMUSG00000027357.17	Crls1	chr2	protein_coding	cardiolipin synthase 1
chr2	132689811	132691786	+	132689045	132691786	A5SS	0.33	50	50	ENSMUST00000028835.13	ENSMUSG00000027357.17	Crls1	chr2	protein_coding	cardiolipin synthase 1
chr2	132691923;132703214	132703129;132704255	+	132691923	132704255	cassetteExon	0.5	100	100	ENSMUST00000110122.10	ENSMUSG00000027357.17	Crls1	chr2	protein_coding	cardiolipin synthase 1
chr2	132691923	132696813	+	132691923	132704255	A3SS	0.33	50	50	ENSMUST00000110122.10	ENSMUSG00000027357.17	Crls1	chr2	protein_coding	cardiolipin synthase 1
chr2	132689811	132691786	+	132689800	132691786	A5SS	0.33	50	50	ENSMUST00000124836.8	ENSMUSG00000027357.17	Crls1	chr2	protein_coding	cardiolipin synthase 1
chr2	132781307	132783857	-	132781435	132783857	A3SS	0.5	50	50	ENSMUST00000134937.2	ENSMUSG00000027356.9	Fermt1	chr2	protein_coding	fermitin family member 1
chr2	134390200;134390591	134390353;134396116	-	134390200	134396116	cassetteExon	0.5	100	100	ENSMUST00000028704.3	ENSMUSG00000027261.3	Hao1	chr2	protein_coding	hydroxyacid oxidase 1, liver
chr2	134481757	134483646	-	134481757	134485762	A5SS	0.5	50	50	ENSMUST00000038228.11	ENSMUSG00000034723.12	Tmx4	chr2	protein_coding	thioredoxin-related transmembrane protein 4
chr2	135094770	135104028	+	135094770;135102519	135102419;135104028	ES	0.5	50	50	ENSMUST00000131552.5	ENSMUSG00000051177.17	Plcb1	chr2	protein_coding	phospholipase C, beta 1
chr2	135229804	135313973	+	135229804;135241286	135241169;135313973	ES	0.5	50	50	ENSMUST00000131552.5	ENSMUSG00000051177.17	Plcb1	chr2	protein_coding	phospholipase C, beta 1
chr2	135091970;135093514	135093441;135093653	+	135091970	135093653	cassetteExon	0.5	100	100	ENSMUST00000131552.5	ENSMUSG00000051177.17	Plcb1	chr2	protein_coding	phospholipase C, beta 1
chr2	135094770	135096966	+	135094770	135102419	A3SS	0.33	50	50	ENSMUST00000131552.5	ENSMUSG00000051177.17	Plcb1	chr2	protein_coding	phospholipase C, beta 1
chr2	135091188	135091891	+	135062775	135091891	A5SS	0.5	50	50	ENSMUST00000131552.5	ENSMUSG00000051177.17	Plcb1	chr2	protein_coding	phospholipase C, beta 1
chr2	135229804	135313973	+	135229804	135241169	3pMXE	0.5	50	50	ENSMUST00000070724.12	ENSMUSG00000051177.17	Plcb1	chr2	protein_coding	phospholipase C, beta 1
chr2	135094770	135096966	+	135094770	135104028	A3SS	0.33	50	50	ENSMUST00000129382.5	ENSMUSG00000051177.17	Plcb1	chr2	protein_coding	phospholipase C, beta 1
chr2	135424529	135424933	-	135168353	135424933	A3SS	0.5	50	50	ENSMUST00000153402.2	ENSMUSG00000085631.2	9630028H03Rik	chr2	lncRNA	RIKEN cDNA 9630028H03 gene
chr2	135501650	135583750	+	135501374	135583750	A5SS	0.5	50	50	ENSMUST00000144931.2	ENSMUSG00000039943.17	Plcb4	chr2	protein_coding	phospholipase C, beta 4
chr2	135583807;135647525	135647469;135719303	+	135583807	135719303	cassetteExon	0.5	100	100	ENSMUST00000146018.8	ENSMUSG00000039943.17	Plcb4	chr2	protein_coding	phospholipase C, beta 4
chr2	135803739	135808945	+	135803739;135807007	135806972;135808945	ES	0.5	50	50	ENSMUST00000134310.8	ENSMUSG00000039943.17	Plcb4	chr2	protein_coding	phospholipase C, beta 4
chr2	135729684	135749419	+	135719401	135749419	A5SS	0.5	50	50	ENSMUST00000134310.8	ENSMUSG00000039943.17	Plcb4	chr2	protein_coding	phospholipase C, beta 4
chr2	135785323	135788966	+	135781924	135788966	A5SS	0.5	50	50	ENSMUST00000134310.8	ENSMUSG00000039943.17	Plcb4	chr2	protein_coding	phospholipase C, beta 4
chr2	135606975	135647469	+	135583807	135647469	A5SS	0.5	50	50	ENSMUST00000137969.8	ENSMUSG00000039943.17	Plcb4	chr2	protein_coding	phospholipase C, beta 4
chr2	135849829	135854886	+	135849829;135852892	135852856;135854886	ES	0.5	50	50	ENSMUST00000184371.8	ENSMUSG00000039943.17	Plcb4	chr2	protein_coding	phospholipase C, beta 4
chr2	135840672;135842229	135842054;135844479	+	135840672	135844479	cassetteExon	0.5	100	100	ENSMUST00000184371.8	ENSMUSG00000039943.17	Plcb4	chr2	protein_coding	phospholipase C, beta 4
chr2	135583807	135719303	+	135647525	135719303	5pMXE	0.5	50	50	ENSMUST00000035646.11	ENSMUSG00000039943.17	Plcb4	chr2	protein_coding	phospholipase C, beta 4
chr2	136111397	136229574	-	136111397;136175407	136175288;136229574	ES	0.5	50	50	ENSMUST00000035264.9	ENSMUSG00000039913.13	Pak5	chr2	protein_coding	p21 (RAC1) activated kinase 5
chr2	136344304	136375573	+	136344304	136355504	3pMXE	0.33	50	50	ENSMUST00000154394.2	ENSMUSG00000074771.11	Ankef1	chr2	protein_coding	ankyrin repeat and EF-hand domain containing 1
chr2	136344304;136344951	136344859;136355504	+	136344304	136355504	cassetteExon	0.5	100	100	ENSMUST00000154394.2	ENSMUSG00000074771.11	Ankef1	chr2	protein_coding	ankyrin repeat and EF-hand domain containing 1
chr2	136344951	136355504	+	136344951	136348511	3pMXE	0.5	50	50	ENSMUST00000150189.8	ENSMUSG00000074771.11	Ankef1	chr2	protein_coding	ankyrin repeat and EF-hand domain containing 1
chr2	136344304	136344859	+	136344304	136375573	A3SS	0.33	50	50	ENSMUST00000149712.8	ENSMUSG00000074771.11	Ankef1	chr2	protein_coding	ankyrin repeat and EF-hand domain containing 1
chr2	136357614	136375573	+	136344304	136375573	A5SS	0.33	50	50	ENSMUST00000149712.8	ENSMUSG00000074771.11	Ankef1	chr2	protein_coding	ankyrin repeat and EF-hand domain containing 1
chr2	136374391	136375573	+	136344304	136375573	A5SS	0.33	50	50	ENSMUST00000149712.8	ENSMUSG00000074771.11	Ankef1	chr2	protein_coding	ankyrin repeat and EF-hand domain containing 1
chr2	136386702	136387631	+	136386716	136387631	A5SS	0.5	50	50	ENSMUST00000149712.8	ENSMUSG00000074771.11	Ankef1	chr2	protein_coding	ankyrin repeat and EF-hand domain containing 1
chr2	136374391	136375573	+	136357614	136375573	A5SS	0.33	50	50	ENSMUST00000180246.8	ENSMUSG00000074771.11	Ankef1	chr2	protein_coding	ankyrin repeat and EF-hand domain containing 1
chr2	136395109	136395542	+	136394462	136395542	A5SS	0.5	50	50	ENSMUST00000180246.8	ENSMUSG00000074771.11	Ankef1	chr2	protein_coding	ankyrin repeat and EF-hand domain containing 1
chr2	136395109	136396606	+	136395702	136396606	A5SS&ES	0.5	50	50	ENSMUST00000180246.8	ENSMUSG00000074771.11	Ankef1	chr2	protein_coding	ankyrin repeat and EF-hand domain containing 1
chr2	136395109	136396606	+	136395109	136395542	3pMXE	0.5	50	50	ENSMUST00000131970.2	ENSMUSG00000074771.11	Ankef1	chr2	protein_coding	ankyrin repeat and EF-hand domain containing 1
chr2	136395109;136395702	136395542;136396606	+	136395109	136396606	cassetteExon	0.5	100	100	ENSMUST00000138967.2	ENSMUSG00000074771.11	Ankef1	chr2	protein_coding	ankyrin repeat and EF-hand domain containing 1
chr2	136605541;136611780	136611663;136615815	+	136605541;136612094	136611977;136615815	MXE	0.5	100	100	ENSMUST00000028727.11	ENSMUSG00000027273.14	Snap25	chr2	protein_coding	synaptosomal-associated protein 25
chr2	136727620	136730279	-	136727620	136733199	A5SS	0.33	50	50	ENSMUST00000028730.13	ENSMUSG00000027274.17	Mkks	chr2	protein_coding	McKusick-Kaufman syndrome
chr2	136727620	136732963	-	136727620	136733199	A5SS	0.33	50	50	ENSMUST00000028730.13	ENSMUSG00000027274.17	Mkks	chr2	protein_coding	McKusick-Kaufman syndrome
chr2	136727620;136730327	136730279;136732963	-	136727620	136732963	cassetteExon	0.5	100	100	ENSMUST00000110089.9	ENSMUSG00000027274.17	Mkks	chr2	protein_coding	McKusick-Kaufman syndrome
chr2	136747520;136789169	136788962;136842104	+	136747520	136842104	cassetteExon	0.5	100	100	ENSMUST00000028737.13	ENSMUSG00000027281.17	Slx4ip	chr2	protein_coding	SLX4 interacting protein
chr2	136842193;136846974	136846854;136885920	+	136842193	136885920	cassetteExon	0.5	100	100	ENSMUST00000028737.13	ENSMUSG00000027281.17	Slx4ip	chr2	protein_coding	SLX4 interacting protein
chr2	136885997;136888725	136888637;136908050	+	136885997	136908050	cassetteExon	0.5	100	100	ENSMUST00000028737.13	ENSMUSG00000027281.17	Slx4ip	chr2	protein_coding	SLX4 interacting protein
chr2	136747520	136788225	+	136747520	136842104	A3SS	0.33	50	50	ENSMUST00000028737.13	ENSMUSG00000027281.17	Slx4ip	chr2	protein_coding	SLX4 interacting protein
chr2	136733581	136747463	+	136733309	136747463	A5SS	0.33	50	50	ENSMUST00000028737.13	ENSMUSG00000027281.17	Slx4ip	chr2	protein_coding	SLX4 interacting protein
chr2	136734281	136747463	+	136733309	136747463	A5SS	0.33	50	50	ENSMUST00000028737.13	ENSMUSG00000027281.17	Slx4ip	chr2	protein_coding	SLX4 interacting protein
chr2	136901475	136908050	+	136885997	136908050	A5SS	0.33	50	50	ENSMUST00000028737.13	ENSMUSG00000027281.17	Slx4ip	chr2	protein_coding	SLX4 interacting protein
chr2	136747520	136788962	+	136747520;136788424	136788225;136788962	ES	0.5	50	50	ENSMUST00000141463.8	ENSMUSG00000027281.17	Slx4ip	chr2	protein_coding	SLX4 interacting protein
chr2	136733581;136734281	136734204;136747463	+	136733581	136747463	cassetteExon	0.5	100	100	ENSMUST00000141463.8	ENSMUSG00000027281.17	Slx4ip	chr2	protein_coding	SLX4 interacting protein
chr2	136888725;136901475	136901401;136908050	+	136888725	136908050	cassetteExon	0.5	100	100	ENSMUST00000135260.8	ENSMUSG00000027281.17	Slx4ip	chr2	protein_coding	SLX4 interacting protein
chr2	136733581	136747463	+	136734281	136747463	5pMXE	0.33	50	50	ENSMUST00000130856.2	ENSMUSG00000027281.17	Slx4ip	chr2	protein_coding	SLX4 interacting protein
chr2	138098674	138120886	+	138098674	138267609	A3SS	0.5	50	50	ENSMUST00000155646.8	ENSMUSG00000062098.12	Btbd3	chr2	protein_coding	BTB (POZ) domain containing 3
chr2	138331181	138331644	+	138331181	138381038	A3SS	0.5	50	50	ENSMUST00000155646.8	ENSMUSG00000062098.12	Btbd3	chr2	protein_coding	BTB (POZ) domain containing 3
chr2	139520706	139573790	+	139520727	139573790	A5SS	0.5	50	50	ENSMUST00000184404.8	ENSMUSG00000074766.11	Ism1	chr2	protein_coding	isthmin 1, angiogenesis inhibitor
chr2	139725802	139789077	-	139725802;139752563	139752453;139789077	ES	0.5	50	50	ENSMUST00000046656.9	ENSMUSG00000039033.12	Tasp1	chr2	protein_coding	taspase, threonine aspartase 1
chr2	139899419	139908674	-	139899419	139908407	A5SS	0.5	50	50	ENSMUST00000046656.9	ENSMUSG00000039033.12	Tasp1	chr2	protein_coding	taspase, threonine aspartase 1
chr2	140013325	140013947	+	140012853	140013947	A5SS	0.5	50	50	ENSMUST00000044825.5	ENSMUSG00000027384.7	Ndufaf5	chr2	protein_coding	NADH:ubiquinone oxidoreductase complex assembly factor 5
chr2	140135994	140146529	-	140127226	140146529	A3SS	0.5	50	50	ENSMUST00000122367.8	ENSMUSG00000074764.12	Sel1l2	chr2	protein_coding	sel-1 suppressor of lin-12-like 2 (C. elegans)
chr2	140135994	140137914	-	140135994	140146529	A5SS	0.5	50	50	ENSMUST00000120133.2	ENSMUSG00000074764.12	Sel1l2	chr2	protein_coding	sel-1 suppressor of lin-12-like 2 (C. elegans)
chr2	142052064;142059581	142059498;142098441	+	142052064	142098441	cassetteExon	0.5	100	100	ENSMUST00000110067.8	ENSMUSG00000068205.15	Macrod2	chr2	protein_coding	mono-ADP ribosylhydrolase 2
chr2	142216228;142226308	142226241;142231752	+	142216228	142231752	cassetteExon	0.5	100	100	ENSMUST00000110067.8	ENSMUSG00000068205.15	Macrod2	chr2	protein_coding	mono-ADP ribosylhydrolase 2
chr2	140242898	140260737	+	140242898	140294499	A3SS	0.5	50	50	ENSMUST00000110067.8	ENSMUSG00000068205.15	Macrod2	chr2	protein_coding	mono-ADP ribosylhydrolase 2
chr2	140294606	140351799	+	140294606	140666972	A3SS	0.25	50	50	ENSMUST00000110067.8	ENSMUSG00000068205.15	Macrod2	chr2	protein_coding	mono-ADP ribosylhydrolase 2
chr2	140294606	140437986	+	140294606	140666972	A3SS	0.25	50	50	ENSMUST00000110067.8	ENSMUSG00000068205.15	Macrod2	chr2	protein_coding	mono-ADP ribosylhydrolase 2
chr2	140294606	140548122	+	140294606	140666972	A3SS	0.25	50	50	ENSMUST00000110067.8	ENSMUSG00000068205.15	Macrod2	chr2	protein_coding	mono-ADP ribosylhydrolase 2
chr2	140866061	140989547	+	140866061	141357124	A3SS	0.5	50	50	ENSMUST00000110067.8	ENSMUSG00000068205.15	Macrod2	chr2	protein_coding	mono-ADP ribosylhydrolase 2
chr2	140237622	140242782	+	140237641	140242782	A5SS	0.5	50	50	ENSMUST00000110067.8	ENSMUSG00000068205.15	Macrod2	chr2	protein_coding	mono-ADP ribosylhydrolase 2
chr2	141397772	141566544	+	141357245	141566544	A5SS	0.5	50	50	ENSMUST00000110067.8	ENSMUSG00000068205.15	Macrod2	chr2	protein_coding	mono-ADP ribosylhydrolase 2
chr2	142098551	142103013	+	142098503	142103013	A5SS	0.5	50	50	ENSMUST00000110067.8	ENSMUSG00000068205.15	Macrod2	chr2	protein_coding	mono-ADP ribosylhydrolase 2
chr2	140294606	140351799	+	140294606	140548122	A3SS	0.25	50	50	ENSMUST00000110063.8	ENSMUSG00000068205.15	Macrod2	chr2	protein_coding	mono-ADP ribosylhydrolase 2
chr2	140294606	140437986	+	140294606	140548122	A3SS	0.25	50	50	ENSMUST00000110063.8	ENSMUSG00000068205.15	Macrod2	chr2	protein_coding	mono-ADP ribosylhydrolase 2
chr2	142059581	142076190	+	142059581	142098441	A3SS	0.5	50	50	ENSMUST00000110064.8	ENSMUSG00000068205.15	Macrod2	chr2	protein_coding	mono-ADP ribosylhydrolase 2
chr2	140260834	140261871	+	140260834	140261825	A3SS	0.5	50	50	ENSMUST00000110062.8	ENSMUSG00000068205.15	Macrod2	chr2	protein_coding	mono-ADP ribosylhydrolase 2
chr2	142216228	142231752	+	142216228	142226241	3pMXE	0.5	50	50	ENSMUST00000078027.12	ENSMUSG00000068205.15	Macrod2	chr2	protein_coding	mono-ADP ribosylhydrolase 2
chr2	140294606	140437986	+	140294606	140351799	3pMXE	0.25	50	50	ENSMUST00000150460.8	ENSMUSG00000068205.15	Macrod2	chr2	protein_coding	mono-ADP ribosylhydrolase 2
chr2	140503671	140505181	-	140498906	140505181	A3SS	0.5	50	50	ENSMUST00000172544.8	ENSMUSG00000051379.13	Flrt3	chr2	protein_coding	fibronectin leucine rich transmembrane protein 3
chr2	140503671	140504628	-	140503671	140505181	A5SS	0.5	50	50	ENSMUST00000110057.3	ENSMUSG00000051379.13	Flrt3	chr2	protein_coding	fibronectin leucine rich transmembrane protein 3
chr2	142556652	142581443	-	142556652;142557014	142556982;142581443	ES	0.5	50	50	ENSMUST00000230763.2	ENSMUSG00000038844.11	Kif16b	chr2	protein_coding	kinesin family member 16B
chr2	142541815	142544543	-	142532621	142544543	A3SS	0.33	50	50	ENSMUST00000230763.2	ENSMUSG00000038844.11	Kif16b	chr2	protein_coding	kinesin family member 16B
chr2	142543246	142544543	-	142532621	142544543	A3SS	0.33	50	50	ENSMUST00000230763.2	ENSMUSG00000038844.11	Kif16b	chr2	protein_coding	kinesin family member 16B
chr2	142543246	142544543	-	142541815	142544543	A3SS	0.33	50	50	ENSMUST00000211861.2	ENSMUSG00000038844.11	Kif16b	chr2	protein_coding	kinesin family member 16B
chr2	142905232	142906462	+	142905018	142906462	A5SS	0.5	50	50	ENSMUST00000008477.13	ENSMUSG00000008333.13	Snrpb2	chr2	protein_coding	U2 small nuclear ribonucleoprotein B
chr2	143380042;143381054	143380986;143384131	-	143380042	143384131	cassetteExon	0.5	100	100	ENSMUST00000126735.8	ENSMUSG00000086171.8	Pcsk2os1	chr2	lncRNA	proprotein convertase subtilisin/kexin type 2, opposite strand 1
chr2	143384283	143387746	-	143384283	143388325	A5SS	0.5	50	50	ENSMUST00000126735.8	ENSMUSG00000086171.8	Pcsk2os1	chr2	lncRNA	proprotein convertase subtilisin/kexin type 2, opposite strand 1
chr2	143627670	143637804	-	143627670	143629777	5pMXE	0.5	50	50	ENSMUST00000153878.8	ENSMUSG00000087115.8	Pcsk2os2	chr2	lncRNA	proprotein convertase subtilisin/kexin type 2, opposite strand 2
chr2	143683701	143687821	-	143683719	143687821	A3SS	0.5	50	50	ENSMUST00000099296.4	ENSMUSG00000027420.14	Bfsp1	chr2	protein_coding	beaded filament structural protein 1, in lens-CP94
chr2	143828089	143830068	-	143816529	143830068	A3SS	0.5	50	50	ENSMUST00000016072.12	ENSMUSG00000027422.16	Rrbp1	chr2	protein_coding	ribosome binding protein 1
chr2	143816529	143823386	-	143816529	143830068	A5SS	0.5	50	50	ENSMUST00000016072.12	ENSMUSG00000027422.16	Rrbp1	chr2	protein_coding	ribosome binding protein 1
chr2	143875088	143907325	+	143875088;143904335	143904217;143907325	ES	0.5	50	50	ENSMUST00000037722.9	ENSMUSG00000037307.12	Banf2	chr2	protein_coding	BANF family member 2
chr2	143901703;143907825	143907761;143910602	-	143901703	143910602	cassetteExon	0.5	100	100	ENSMUST00000124061.2	ENSMUSG00000086384.2	Banf2os	chr2	lncRNA	barrier to autointegration factor 2, opposite strand
chr2	143942437;144031153	144031061;144032847	-	143942437	144032847	cassetteExon	0.5	100	100	ENSMUST00000211068.2	ENSMUSG00000074758.11	Gm5535	chr2	lncRNA	predicted gene 5535
chr2	144016664	144032847	-	143942437	144032847	A3SS	0.33	50	50	ENSMUST00000211068.2	ENSMUSG00000074758.11	Gm5535	chr2	lncRNA	predicted gene 5535
chr2	144016664	144031061	-	143942437	144031061	A3SS	0.33	50	50	ENSMUST00000210482.2	ENSMUSG00000074758.11	Gm5535	chr2	lncRNA	predicted gene 5535
chr2	144016664	144032847	-	144031153	144032847	A3SS&ES	0.33	50	50	ENSMUST00000210482.2	ENSMUSG00000074758.11	Gm5535	chr2	lncRNA	predicted gene 5535
chr2	144021068	144031061	-	143942437	144031061	A3SS	0.33	50	50	ENSMUST00000210482.2	ENSMUSG00000074758.11	Gm5535	chr2	lncRNA	predicted gene 5535
chr2	144010546	144016221	-	144010546	144015257	A5SS	0.5	50	50	ENSMUST00000210200.2	ENSMUSG00000074758.11	Gm5535	chr2	lncRNA	predicted gene 5535
chr2	144016664	144032847	-	144016664;144031153	144031061;144032847	ES	0.5	50	50	ENSMUST00000210067.2	ENSMUSG00000074758.11	Gm5535	chr2	lncRNA	predicted gene 5535
chr2	144016664;144021068	144020948;144031061	-	144016664	144031061	cassetteExon	0.5	100	100	ENSMUST00000210067.2	ENSMUSG00000074758.11	Gm5535	chr2	lncRNA	predicted gene 5535
chr2	144016328	144016447	-	144016323	144016447	A3SS	0.5	50	50	ENSMUST00000210067.2	ENSMUSG00000074758.11	Gm5535	chr2	lncRNA	predicted gene 5535
chr2	144016664	144049789	-	144016664	144032847	5pMXE	0.25	50	50	ENSMUST00000211025.2	ENSMUSG00000074758.11	Gm5535	chr2	lncRNA	predicted gene 5535
chr2	144016664	144020948	-	144016664	144032847	A5SS	0.25	50	50	ENSMUST00000211025.2	ENSMUSG00000074758.11	Gm5535	chr2	lncRNA	predicted gene 5535
chr2	144046175	144049789	-	144016664	144049789	A3SS	0.25	50	50	ENSMUST00000210577.2	ENSMUSG00000074758.11	Gm5535	chr2	lncRNA	predicted gene 5535
chr2	144046803	144049789	-	144016664	144049789	A3SS	0.25	50	50	ENSMUST00000210577.2	ENSMUSG00000074758.11	Gm5535	chr2	lncRNA	predicted gene 5535
chr2	144047153	144049789	-	144016664	144049789	A3SS	0.25	50	50	ENSMUST00000210577.2	ENSMUSG00000074758.11	Gm5535	chr2	lncRNA	predicted gene 5535
chr2	144016664	144020948	-	144016664	144049789	A5SS	0.25	50	50	ENSMUST00000210577.2	ENSMUSG00000074758.11	Gm5535	chr2	lncRNA	predicted gene 5535
chr2	144016664	144031061	-	144016664	144049789	A5SS	0.25	50	50	ENSMUST00000210577.2	ENSMUSG00000074758.11	Gm5535	chr2	lncRNA	predicted gene 5535
chr2	144016664	144031061	-	144016664	144020948	5pMXE	0.25	50	50	ENSMUST00000166982.3	ENSMUSG00000074758.11	Gm5535	chr2	lncRNA	predicted gene 5535
chr2	144046175;144046803	144046734;144049789	-	144046175	144049789	cassetteExon	0.5	100	100	ENSMUST00000209431.2	ENSMUSG00000074758.11	Gm5535	chr2	lncRNA	predicted gene 5535
chr2	144046175;144047153	144046734;144049789	-	144046175	144049789	cassetteExon	0.5	100	100	ENSMUST00000209431.2	ENSMUSG00000074758.11	Gm5535	chr2	lncRNA	predicted gene 5535
chr2	144046803;144047153	144047116;144049789	-	144046803	144049789	cassetteExon	0.5	100	100	ENSMUST00000209284.2	ENSMUSG00000074758.11	Gm5535	chr2	lncRNA	predicted gene 5535
chr2	144094450;144095092	144095023;144095582	-	144094450	144095582	cassetteExon	0.5	100	100	ENSMUST00000028909.5	ENSMUSG00000027423.16	Snx5	chr2	protein_coding	sorting nexin 5
chr2	144111512	144112297	-	144103944	144112297	A3SS	0.5	50	50	ENSMUST00000028909.5	ENSMUSG00000027423.16	Snx5	chr2	protein_coding	sorting nexin 5
chr2	144096732	144096823	-	144096733	144096823	A3SS	0.5	50	50	ENSMUST00000153033.2	ENSMUSG00000027423.16	Snx5	chr2	protein_coding	sorting nexin 5
chr2	144112992	144113835	+	144112934	144113835	A5SS	0.33	50	50	ENSMUST00000110028.8	ENSMUSG00000027424.12	Mgme1	chr2	protein_coding	mitochondrial genome maintenance exonuclease 1
chr2	144113263	144113835	+	144112934	144113835	A5SS	0.33	50	50	ENSMUST00000110028.8	ENSMUSG00000027424.12	Mgme1	chr2	protein_coding	mitochondrial genome maintenance exonuclease 1
chr2	144113263	144113835	+	144112992	144113835	A5SS	0.33	50	50	ENSMUST00000028910.9	ENSMUSG00000027424.12	Mgme1	chr2	protein_coding	mitochondrial genome maintenance exonuclease 1
chr2	144173041	144173681	-	144173041	144173222	5pMXE	0.5	50	50	ENSMUST00000103171.10	ENSMUSG00000037279.14	Ovol2	chr2	protein_coding	ovo like zinc finger 2
chr2	144217883	144231095	+	144217883;144222748	144222627;144231095	ES	0.33	50	50	ENSMUST00000028911.15	ENSMUSG00000027425.19	Kat14	chr2	protein_coding	lysine acetyltransferase 14
chr2	144211077;144213713	144213525;144215111	+	144211077	144215111	cassetteExon	0.5	100	100	ENSMUST00000028911.15	ENSMUSG00000027425.19	Kat14	chr2	protein_coding	lysine acetyltransferase 14
chr2	144231276	144235203	+	144231276	144235224	A3SS	0.33	50	50	ENSMUST00000028911.15	ENSMUSG00000027425.19	Kat14	chr2	protein_coding	lysine acetyltransferase 14
chr2	144215289	144217765	+	144215775	144217765	A5SS	0.33	50	50	ENSMUST00000028911.15	ENSMUSG00000027425.19	Kat14	chr2	protein_coding	lysine acetyltransferase 14
chr2	144217582	144217765	+	144215775	144217765	A5SS	0.33	50	50	ENSMUST00000028911.15	ENSMUSG00000027425.19	Kat14	chr2	protein_coding	lysine acetyltransferase 14
chr2	144231016	144231095	+	144222748	144231095	A5SS	0.33	50	50	ENSMUST00000028911.15	ENSMUSG00000027425.19	Kat14	chr2	protein_coding	lysine acetyltransferase 14
chr2	144217582	144217765	+	144215289	144217765	A5SS	0.33	50	50	ENSMUST00000147747.8	ENSMUSG00000027425.19	Kat14	chr2	protein_coding	lysine acetyltransferase 14
chr2	144231276	144242606	+	144231276	144235224	3pMXE	0.33	50	50	ENSMUST00000156410.2	ENSMUSG00000027425.19	Kat14	chr2	protein_coding	lysine acetyltransferase 14
chr2	144231016	144231095	+	144217883	144231095	A5SS	0.33	50	50	ENSMUST00000156410.2	ENSMUSG00000027425.19	Kat14	chr2	protein_coding	lysine acetyltransferase 14
chr2	144231276	144235203	+	144231276	144242606	A3SS	0.33	50	50	ENSMUST00000130654.8	ENSMUSG00000027425.19	Kat14	chr2	protein_coding	lysine acetyltransferase 14
chr2	144236298	144242606	+	144231276	144242606	A5SS	0.5	50	50	ENSMUST00000130654.8	ENSMUSG00000027425.19	Kat14	chr2	protein_coding	lysine acetyltransferase 14
chr2	144306494	144338148	+	144306494	144308853	3pMXE	0.5	50	50	ENSMUST00000124788.2	ENSMUSG00000083674.4	Zfp133-ps	chr2	transcribed_unitary_pseudogene	zinc finger protein 133, pseudogene
chr2	144344951	144346260	-	144344954	144346260	A3SS	0.5	50	50	ENSMUST00000163701.2	ENSMUSG00000037259.16	Dzank1	chr2	protein_coding	double zinc ribbon and ankyrin repeat domains 1
chr2	144367616	144368502	-	144367616	144369200	A5SS	0.5	50	50	ENSMUST00000163701.2	ENSMUSG00000037259.16	Dzank1	chr2	protein_coding	double zinc ribbon and ankyrin repeat domains 1
chr2	144375145	144375894	+	144375145	144376219	A3SS	0.5	50	50	ENSMUST00000028914.9	ENSMUSG00000027427.14	Polr3f	chr2	protein_coding	polymerase (RNA) III (DNA directed) polypeptide F
chr2	144376296	144377861	+	144376331	144377861	A5SS	0.5	50	50	ENSMUST00000028914.9	ENSMUSG00000027427.14	Polr3f	chr2	protein_coding	polymerase (RNA) III (DNA directed) polypeptide F
chr2	144386379;144387295	144387104;144389914	-	144386379	144389914	cassetteExon	0.5	100	100	ENSMUST00000028915.6	ENSMUSG00000027428.10	Rbbp9	chr2	protein_coding	retinoblastoma binding protein 9, serine hydrolase
chr2	144398262	144401127	+	144398244	144401127	A5SS	0.2	50	50	ENSMUST00000143573.8	ENSMUSG00000027429.17	Sec23b	chr2	protein_coding	SEC23 homolog B, COPII coat complex component
chr2	144398333	144401127	+	144398244	144401127	A5SS	0.2	50	50	ENSMUST00000143573.8	ENSMUSG00000027429.17	Sec23b	chr2	protein_coding	SEC23 homolog B, COPII coat complex component
chr2	144398567	144401127	+	144398244	144401127	A5SS	0.2	50	50	ENSMUST00000143573.8	ENSMUSG00000027429.17	Sec23b	chr2	protein_coding	SEC23 homolog B, COPII coat complex component
chr2	144399828	144401127	+	144398244	144401127	A5SS	0.2	50	50	ENSMUST00000143573.8	ENSMUSG00000027429.17	Sec23b	chr2	protein_coding	SEC23 homolog B, COPII coat complex component
chr2	144406923	144408683	+	144406572	144408683	A5SS	0.5	50	50	ENSMUST00000143573.8	ENSMUSG00000027429.17	Sec23b	chr2	protein_coding	SEC23 homolog B, COPII coat complex component
chr2	144398262;144399828	144399728;144401127	+	144398262	144401127	cassetteExon	0.5	100	100	ENSMUST00000028916.15	ENSMUSG00000027429.17	Sec23b	chr2	protein_coding	SEC23 homolog B, COPII coat complex component
chr2	144398333	144401127	+	144398262	144401127	A5SS	0.2	50	50	ENSMUST00000028916.15	ENSMUSG00000027429.17	Sec23b	chr2	protein_coding	SEC23 homolog B, COPII coat complex component
chr2	144398567	144401127	+	144398262	144401127	A5SS	0.2	50	50	ENSMUST00000028916.15	ENSMUSG00000027429.17	Sec23b	chr2	protein_coding	SEC23 homolog B, COPII coat complex component
chr2	144398333	144401127	+	144399828	144401127	A5SS&ES	0.2	50	50	ENSMUST00000155258.2	ENSMUSG00000027429.17	Sec23b	chr2	protein_coding	SEC23 homolog B, COPII coat complex component
chr2	144398567	144401127	+	144399828	144401127	A5SS&ES	0.2	50	50	ENSMUST00000155258.2	ENSMUSG00000027429.17	Sec23b	chr2	protein_coding	SEC23 homolog B, COPII coat complex component
chr2	144398333	144401127	+	144398567	144401127	A5SS	0.2	50	50	ENSMUST00000143921.2	ENSMUSG00000027429.17	Sec23b	chr2	protein_coding	SEC23 homolog B, COPII coat complex component
chr2	144458579	144459112	+	144445798	144459112	A5SS	0.5	50	50	ENSMUST00000028917.7	ENSMUSG00000027430.13	Dtd1	chr2	protein_coding	D-tyrosyl-tRNA deacylase 1
chr2	144521322	144588821	+	144477784	144588821	A5SS	0.25	50	50	ENSMUST00000028917.7	ENSMUSG00000027430.13	Dtd1	chr2	protein_coding	D-tyrosyl-tRNA deacylase 1
chr2	144574030	144588821	+	144477784	144588821	A5SS	0.25	50	50	ENSMUST00000028917.7	ENSMUSG00000027430.13	Dtd1	chr2	protein_coding	D-tyrosyl-tRNA deacylase 1
chr2	144580503	144588821	+	144477784	144588821	A5SS	0.25	50	50	ENSMUST00000028917.7	ENSMUSG00000027430.13	Dtd1	chr2	protein_coding	D-tyrosyl-tRNA deacylase 1
chr2	144574030	144588821	+	144521322	144588821	A5SS	0.33	50	50	ENSMUST00000137406.2	ENSMUSG00000027430.13	Dtd1	chr2	protein_coding	D-tyrosyl-tRNA deacylase 1
chr2	144580503	144588821	+	144521322	144588821	A5SS	0.33	50	50	ENSMUST00000137406.2	ENSMUSG00000027430.13	Dtd1	chr2	protein_coding	D-tyrosyl-tRNA deacylase 1
chr2	144580503	144588821	+	144574030	144588821	A5SS	0.25	50	50	ENSMUST00000125683.8	ENSMUSG00000027430.13	Dtd1	chr2	protein_coding	D-tyrosyl-tRNA deacylase 1
chr2	145010117	145290426	+	145010117;145087009	145086881;145290426	ES	0.5	50	50	ENSMUST00000110007.8	ENSMUSG00000063873.11	Slc24a3	chr2	protein_coding	solute carrier family 24 (sodium/potassium/calcium exchanger), member 3
chr2	145084575	145086881	+	145010117	145086881	A5SS	0.5	50	50	ENSMUST00000110007.8	ENSMUSG00000063873.11	Slc24a3	chr2	protein_coding	solute carrier family 24 (sodium/potassium/calcium exchanger), member 3
chr2	145010117	145290426	+	145087009	145290426	5pMXE	0.5	50	50	ENSMUST00000081121.4	ENSMUSG00000063873.11	Slc24a3	chr2	protein_coding	solute carrier family 24 (sodium/potassium/calcium exchanger), member 3
chr2	145517504	145554375	+	145517504;145519099	145519004;145554375	ES	0.33	50	50	ENSMUST00000231581.2	ENSMUSG00000001768.17	Rin2	chr2	protein_coding	Ras and Rab interactor 2
chr2	145579374	145593833	+	145579374	145628242	A3SS	0.5	50	50	ENSMUST00000231581.2	ENSMUSG00000001768.17	Rin2	chr2	protein_coding	Ras and Rab interactor 2
chr2	145543242	145554375	+	145519099	145554375	A5SS	0.33	50	50	ENSMUST00000231581.2	ENSMUSG00000001768.17	Rin2	chr2	protein_coding	Ras and Rab interactor 2
chr2	145626856	145628242	+	145579374	145628242	A5SS	0.33	50	50	ENSMUST00000231581.2	ENSMUSG00000001768.17	Rin2	chr2	protein_coding	Ras and Rab interactor 2
chr2	145628099	145628242	+	145579374	145628242	A5SS	0.33	50	50	ENSMUST00000231581.2	ENSMUSG00000001768.17	Rin2	chr2	protein_coding	Ras and Rab interactor 2
chr2	145543242	145554375	+	145517504	145554375	A5SS	0.33	50	50	ENSMUST00000144661.2	ENSMUSG00000001768.17	Rin2	chr2	protein_coding	Ras and Rab interactor 2
chr2	145628099	145628242	+	145626856	145628242	A5SS	0.33	50	50	ENSMUST00000142847.8	ENSMUSG00000001768.17	Rin2	chr2	protein_coding	Ras and Rab interactor 2
chr2	145664092	145664185	+	145628334	145664185	A5SS	0.5	50	50	ENSMUST00000142847.8	ENSMUSG00000001768.17	Rin2	chr2	protein_coding	Ras and Rab interactor 2
chr2	145664285;145664681	145664530;145686631	+	145664285	145686631	cassetteExon	0.5	100	100	ENSMUST00000110005.8	ENSMUSG00000001768.17	Rin2	chr2	protein_coding	Ras and Rab interactor 2
chr2	145704617	145718311	+	145703094	145718311	A5SS	0.5	50	50	ENSMUST00000110005.8	ENSMUSG00000001768.17	Rin2	chr2	protein_coding	Ras and Rab interactor 2
chr2	145664285	145686631	+	145664285	145664530	3pMXE	0.5	50	50	ENSMUST00000150449.2	ENSMUSG00000001768.17	Rin2	chr2	protein_coding	Ras and Rab interactor 2
chr2	145750535	145753617	+	145750535	145753593	A3SS	0.5	50	50	ENSMUST00000150316.8	ENSMUSG00000002728.15	Naa20	chr2	protein_coding	N(alpha)-acetyltransferase 20, NatB catalytic subunit
chr2	145753683	145754287	+	145753683	145754313	A3SS	0.5	50	50	ENSMUST00000150316.8	ENSMUSG00000002728.15	Naa20	chr2	protein_coding	N(alpha)-acetyltransferase 20, NatB catalytic subunit
chr2	145745282	145750511	+	145744108	145750511	A5SS	0.5	50	50	ENSMUST00000150316.8	ENSMUSG00000002728.15	Naa20	chr2	protein_coding	N(alpha)-acetyltransferase 20, NatB catalytic subunit
chr2	145753713	145754313	+	145753683	145754313	A5SS	0.5	50	50	ENSMUST00000150316.8	ENSMUSG00000002728.15	Naa20	chr2	protein_coding	N(alpha)-acetyltransferase 20, NatB catalytic subunit
chr2	145745282	145753617	+	145745282	145750511	A3SS&ES	0.5	50	50	ENSMUST00000110000.8	ENSMUSG00000002728.15	Naa20	chr2	protein_coding	N(alpha)-acetyltransferase 20, NatB catalytic subunit
chr2	145745282;145750535	145750511;145753617	+	145745282	145753617	cassetteExon	0.5	100	100	ENSMUST00000165635.2	ENSMUSG00000002728.15	Naa20	chr2	protein_coding	N(alpha)-acetyltransferase 20, NatB catalytic subunit
chr2	145776760	145788966	+	145776760;145781911	145781760;145788966	ES	0.5	50	50	ENSMUST00000116398.8	ENSMUSG00000037143.18	Cfap61	chr2	protein_coding	cilia and flagella associated protein 61
chr2	145789116	145792679	+	145789116;145791915	145791839;145792679	ES	0.5	50	50	ENSMUST00000116398.8	ENSMUSG00000037143.18	Cfap61	chr2	protein_coding	cilia and flagella associated protein 61
chr2	145792746	145805218	+	145792746;145793104	145792978;145805218	ES	0.5	50	50	ENSMUST00000116398.8	ENSMUSG00000037143.18	Cfap61	chr2	protein_coding	cilia and flagella associated protein 61
chr2	145776760	145781735	+	145776760	145781760	A3SS	0.25	50	50	ENSMUST00000116398.8	ENSMUSG00000037143.18	Cfap61	chr2	protein_coding	cilia and flagella associated protein 61
chr2	145776760	145781755	+	145776760	145781760	A3SS	0.25	50	50	ENSMUST00000116398.8	ENSMUSG00000037143.18	Cfap61	chr2	protein_coding	cilia and flagella associated protein 61
chr2	145883732	145884373	+	145878814	145884373	A5SS	0.5	50	50	ENSMUST00000126415.8	ENSMUSG00000037143.18	Cfap61	chr2	protein_coding	cilia and flagella associated protein 61
chr2	145776760;145781911	145781735;145788966	+	145776760	145788966	cassetteExon	0.5	100	100	ENSMUST00000138774.8	ENSMUSG00000037143.18	Cfap61	chr2	protein_coding	cilia and flagella associated protein 61
chr2	145776760;145781911	145781755;145788966	+	145776760	145788966	cassetteExon	0.5	100	100	ENSMUST00000138774.8	ENSMUSG00000037143.18	Cfap61	chr2	protein_coding	cilia and flagella associated protein 61
chr2	145776760	145781735	+	145776760	145781755	A3SS	0.25	50	50	ENSMUST00000130168.8	ENSMUSG00000037143.18	Cfap61	chr2	protein_coding	cilia and flagella associated protein 61
chr2	145952001;145954501	145954424;145970874	+	145952001	145970874	cassetteExon	0.5	100	100	ENSMUST00000133433.8	ENSMUSG00000037143.18	Cfap61	chr2	protein_coding	cilia and flagella associated protein 61
chr2	145889186	145919181	+	145887467	145919181	A5SS	0.5	50	50	ENSMUST00000133433.8	ENSMUSG00000037143.18	Cfap61	chr2	protein_coding	cilia and flagella associated protein 61
chr2	145994368	145995632	+	145987395	145995632	A5SS	0.5	50	50	ENSMUST00000133433.8	ENSMUSG00000037143.18	Cfap61	chr2	protein_coding	cilia and flagella associated protein 61
chr2	146056320	146056515	+	146042720	146056515	A5SS	0.5	50	50	ENSMUST00000133433.8	ENSMUSG00000037143.18	Cfap61	chr2	protein_coding	cilia and flagella associated protein 61
chr2	145792746	145805218	+	145792746	145792978	3pMXE	0.5	50	50	ENSMUST00000118002.2	ENSMUSG00000037143.18	Cfap61	chr2	protein_coding	cilia and flagella associated protein 61
chr2	146086955	146102286	-	146086955;146090128	146090089;146102286	ES	0.33	50	50	ENSMUST00000109986.9	ENSMUSG00000037110.21	Ralgapa2	chr2	protein_coding	Ral GTPase activating protein, alpha subunit 2 (catalytic)
chr2	146252190	146254654	-	146252190;146254079	146253966;146254654	ES	0.5	50	50	ENSMUST00000109986.9	ENSMUSG00000037110.21	Ralgapa2	chr2	protein_coding	Ral GTPase activating protein, alpha subunit 2 (catalytic)
chr2	146156970;146159719	146159700;146169298	-	146156970	146169298	cassetteExon	0.5	100	100	ENSMUST00000109986.9	ENSMUSG00000037110.21	Ralgapa2	chr2	protein_coding	Ral GTPase activating protein, alpha subunit 2 (catalytic)
chr2	146254788;146260422	146260282;146263513	-	146254788	146263513	cassetteExon	0.5	100	100	ENSMUST00000109986.9	ENSMUSG00000037110.21	Ralgapa2	chr2	protein_coding	Ral GTPase activating protein, alpha subunit 2 (catalytic)
chr2	146100864	146102286	-	146090128	146102286	A3SS	0.33	50	50	ENSMUST00000109986.9	ENSMUSG00000037110.21	Ralgapa2	chr2	protein_coding	Ral GTPase activating protein, alpha subunit 2 (catalytic)
chr2	146100864	146102286	-	146086955	146102286	A3SS	0.33	50	50	ENSMUST00000149499.9	ENSMUSG00000037110.21	Ralgapa2	chr2	protein_coding	Ral GTPase activating protein, alpha subunit 2 (catalytic)
chr2	146086955	146102286	-	146090128	146102286	3pMXE	0.33	50	50	ENSMUST00000131824.8	ENSMUSG00000037110.21	Ralgapa2	chr2	protein_coding	Ral GTPase activating protein, alpha subunit 2 (catalytic)
chr2	146705789	146730941	+	146705789;146712766	146712686;146730941	ES	0.5	50	50	ENSMUST00000099278.9	ENSMUSG00000074749.11	Kiz	chr2	protein_coding	kizuna centrosomal protein
chr2	147028375	147035859	-	147028375	147035975	A5SS	0.5	50	50	ENSMUST00000109969.3	ENSMUSG00000027434.12	Nkx2-2	chr2	protein_coding	NK2 homeobox 2
chr2	147203752	147204271	-	147199728	147204271	A3SS	0.5	50	50	ENSMUST00000233565.2	ENSMUSG00000087521.3	AI646519	chr2	lncRNA	expressed sequence AI646519
chr2	147210515	147234073	+	147210515	147215634	3pMXE	0.5	50	50	ENSMUST00000109968.3	ENSMUSG00000037034.17	Pax1	chr2	protein_coding	paired box 1
chr2	147814934	147830719	-	147814934	147817715	5pMXE	0.5	50	50	ENSMUST00000129082.2	ENSMUSG00000086141.8	9030622O22Rik	chr2	lncRNA	RIKEN cDNA 9030622O22 gene
chr2	147830785	147853171	-	147830785	147882061	A5SS	0.5	50	50	ENSMUST00000136555.8	ENSMUSG00000086141.8	9030622O22Rik	chr2	lncRNA	RIKEN cDNA 9030622O22 gene
chr2	147886219	147887747	-	147886744	147887747	A3SS	0.5	50	50	ENSMUST00000109964.8	ENSMUSG00000037025.12	Foxa2	chr2	protein_coding	forkhead box A2
chr2	147886744	147887195	-	147886744	147887747	A5SS	0.5	50	50	ENSMUST00000109964.8	ENSMUSG00000037025.12	Foxa2	chr2	protein_coding	forkhead box A2
chr2	148514755	148517202	+	148514755;148516518	148516384;148517202	ES	0.5	50	50	ENSMUST00000109961.8	ENSMUSG00000036992.11	Nxt1	chr2	protein_coding	NTF2-related export protein 1
chr2	148523375	148525514	+	148523135	148525514	A5SS	0.5	50	50	ENSMUST00000028928.8	ENSMUSG00000027439.10	Gzf1	chr2	protein_coding	GDNF-inducible zinc finger protein 1
chr2	148530065	148531996	+	148530091	148531996	A5SS	0.5	50	50	ENSMUST00000028928.8	ENSMUSG00000027439.10	Gzf1	chr2	protein_coding	GDNF-inducible zinc finger protein 1
chr2	148548943;148549125	148549079;148551237	-	148548943	148551237	cassetteExon	0.5	100	100	ENSMUST00000136513.2	ENSMUSG00000027438.15	Napb	chr2	protein_coding	N-ethylmaleimide sensitive fusion protein attachment protein beta
chr2	148548943	148551237	-	148548943	148549079	A5SS	0.5	50	50	ENSMUST00000140647.2	ENSMUSG00000027438.15	Napb	chr2	protein_coding	N-ethylmaleimide sensitive fusion protein attachment protein beta
chr2	148592374	148592731	+	148592320	148592731	A5SS	0.5	50	50	ENSMUST00000109955.10	ENSMUSG00000055177.16	Cstl1	chr2	protein_coding	cystatin-like 1
chr2	148592918	148596527	+	148593074	148596527	A5SS	0.5	50	50	ENSMUST00000109955.10	ENSMUSG00000055177.16	Cstl1	chr2	protein_coding	cystatin-like 1
chr2	148640851;148641141	148641057;148641808	+	148640851	148641808	cassetteExon	0.5	100	100	ENSMUST00000028931.10	ENSMUSG00000027442.11	Cst8	chr2	protein_coding	cystatin 8 (cystatin-related epididymal spermatogenic)
chr2	148640851	148641951	+	148640851	148641808	A3SS	0.33	50	50	ENSMUST00000028931.10	ENSMUSG00000027442.11	Cst8	chr2	protein_coding	cystatin 8 (cystatin-related epididymal spermatogenic)
chr2	148640851	148641951	+	148640851	148641057	A3SS&ES	0.33	50	50	ENSMUST00000109947.2	ENSMUSG00000027442.11	Cst8	chr2	protein_coding	cystatin 8 (cystatin-related epididymal spermatogenic)
chr2	148689941	148701397	-	148689941	148692591	5pMXE	0.5	50	50	ENSMUST00000028937.3	ENSMUSG00000027446.3	Cstdc2	chr2	protein_coding	cystatin domain containing 2
chr2	148688922	148689801	-	148688922	148689837	A5SS	0.5	50	50	ENSMUST00000028937.3	ENSMUSG00000027446.3	Cstdc2	chr2	protein_coding	cystatin domain containing 2
chr2	148841297	148844882	-	148841297	148844963	A5SS	0.5	50	50	ENSMUST00000081553.6	ENSMUSG00000063507.6	Gm1330	chr2	protein_coding	predicted gene 1330
chr2	149247534	149251890	+	149247534;149249314	149249201;149251890	ES	0.5	50	50	ENSMUST00000109938.8	ENSMUSG00000033156.10	Cst10	chr2	protein_coding	cystatin 10 (chondrocytes)
chr2	149596978	149640561	-	149586008	149640561	A3SS	0.5	50	50	ENSMUST00000148202.2	ENSMUSG00000087029.2	Gm14133	chr2	lncRNA	predicted gene 14133
chr2	149672845	149741338	+	149671246	149741338	A5SS	0.2	50	50	ENSMUST00000144179.2	ENSMUSG00000074736.11	Syndig1	chr2	protein_coding	synapse differentiation inducing 1
chr2	149672997	149741338	+	149671246	149741338	A5SS	0.2	50	50	ENSMUST00000144179.2	ENSMUSG00000074736.11	Syndig1	chr2	protein_coding	synapse differentiation inducing 1
chr2	149682981	149741338	+	149671246	149741338	A5SS	0.2	50	50	ENSMUST00000144179.2	ENSMUSG00000074736.11	Syndig1	chr2	protein_coding	synapse differentiation inducing 1
chr2	149738320	149741338	+	149671246	149741338	A5SS	0.2	50	50	ENSMUST00000144179.2	ENSMUSG00000074736.11	Syndig1	chr2	protein_coding	synapse differentiation inducing 1
chr2	149672845;149682981	149682923;149741338	+	149672845	149741338	cassetteExon	0.5	100	100	ENSMUST00000109935.8	ENSMUSG00000074736.11	Syndig1	chr2	protein_coding	synapse differentiation inducing 1
chr2	149672845;149738320	149738235;149741338	+	149672845	149741338	cassetteExon	0.5	100	100	ENSMUST00000109935.8	ENSMUSG00000074736.11	Syndig1	chr2	protein_coding	synapse differentiation inducing 1
chr2	149672997	149741338	+	149672845	149741338	A5SS	0.2	50	50	ENSMUST00000109935.8	ENSMUSG00000074736.11	Syndig1	chr2	protein_coding	synapse differentiation inducing 1
chr2	149672845;149682981	149682923;149741338	+	149672845;149738320	149738235;149741338	MXE	0.5	100	100	ENSMUST00000109934.2	ENSMUSG00000074736.11	Syndig1	chr2	protein_coding	synapse differentiation inducing 1
chr2	149672997	149741338	+	149738320	149741338	A5SS&ES	0.25	50	50	ENSMUST00000109934.2	ENSMUSG00000074736.11	Syndig1	chr2	protein_coding	synapse differentiation inducing 1
chr2	149672997	149682923	+	149672845	149682923	A5SS	0.5	50	50	ENSMUST00000140870.8	ENSMUSG00000074736.11	Syndig1	chr2	protein_coding	synapse differentiation inducing 1
chr2	149672997	149741338	+	149682981	149741338	A5SS&ES	0.25	50	50	ENSMUST00000140870.8	ENSMUSG00000074736.11	Syndig1	chr2	protein_coding	synapse differentiation inducing 1
chr2	149672997	149741338	+	149672997;149682981	149682923;149741338	ES	0.25	50	50	ENSMUST00000137280.2	ENSMUSG00000074736.11	Syndig1	chr2	protein_coding	synapse differentiation inducing 1
chr2	149672845	149741338	+	149682981	149741338	A5SS&ES	0.25	50	50	ENSMUST00000137280.2	ENSMUSG00000074736.11	Syndig1	chr2	protein_coding	synapse differentiation inducing 1
chr2	149738320	149741338	+	149682981	149741338	A5SS	0.25	50	50	ENSMUST00000137280.2	ENSMUSG00000074736.11	Syndig1	chr2	protein_coding	synapse differentiation inducing 1
chr2	149960120	149961745	-	149960120;149961548	149961401;149961745	ES	0.5	50	50	ENSMUST00000122859.8	ENSMUSG00000068134.14	Zfp120	chr2	protein_coding	zinc finger protein 120
chr2	149960120	149961485	-	149960120	149961401	A5SS	0.33	50	50	ENSMUST00000122859.8	ENSMUSG00000068134.14	Zfp120	chr2	protein_coding	zinc finger protein 120
chr2	149960120;149961548	149961485;149961745	-	149960120	149961745	cassetteExon	0.5	100	100	ENSMUST00000109931.8	ENSMUSG00000068134.14	Zfp120	chr2	protein_coding	zinc finger protein 120
chr2	149960120	149961745	-	149961548	149961745	3pMXE	0.5	50	50	ENSMUST00000142792.2	ENSMUSG00000068134.14	Zfp120	chr2	protein_coding	zinc finger protein 120
chr2	150153138	150186500	-	150153138;150186289	150186229;150186500	ES	0.5	50	50	ENSMUST00000051153.6	ENSMUSG00000063364.11	3300002I08Rik	chr2	protein_coding	RIKEN cDNA 3300002I08 gene
chr2	150186626;150202112	150202031;150204508	-	150186626	150204508	cassetteExon	0.5	100	100	ENSMUST00000051153.6	ENSMUSG00000063364.11	3300002I08Rik	chr2	protein_coding	RIKEN cDNA 3300002I08 gene
chr2	150185075	150186229	-	150153138	150186229	A3SS	0.5	50	50	ENSMUST00000051153.6	ENSMUSG00000063364.11	3300002I08Rik	chr2	protein_coding	RIKEN cDNA 3300002I08 gene
chr2	150153138	150186500	-	150186289	150186500	3pMXE	0.5	50	50	ENSMUST00000138130.2	ENSMUSG00000063364.11	3300002I08Rik	chr2	protein_coding	RIKEN cDNA 3300002I08 gene
chr2	150436337;150441737	150441648;150442164	-	150436337	150442164	cassetteExon	0.5	100	100	ENSMUST00000046399.7	ENSMUSG00000033096.8	Apmap	chr2	protein_coding	adipocyte plasma membrane associated protein
chr2	150431042	150431953	-	150430939	150431953	A3SS	0.5	50	50	ENSMUST00000046399.7	ENSMUSG00000033096.8	Apmap	chr2	protein_coding	adipocyte plasma membrane associated protein
chr2	150501852	150510258	-	150501852	150509805	5pMXE	0.5	50	50	ENSMUST00000028944.4	ENSMUSG00000027452.12	Acss1	chr2	protein_coding	acyl-CoA synthetase short-chain family member 1
chr2	150479919	150479993	-	150479919	150480284	A5SS	0.5	50	50	ENSMUST00000028944.4	ENSMUSG00000027452.12	Acss1	chr2	protein_coding	acyl-CoA synthetase short-chain family member 1
chr2	150591153;150594612	150594539;150594930	+	150591153	150594930	cassetteExon	0.5	100	100	ENSMUST00000094467.6	ENSMUSG00000033068.17	Entpd6	chr2	protein_coding	ectonucleoside triphosphate diphosphohydrolase 6
chr2	150631104	150643458	+	150629030	150643458	A5SS	0.5	50	50	ENSMUST00000045441.8	ENSMUSG00000033059.8	Pygb	chr2	protein_coding	brain glycogen phosphorylase
chr2	150677271	150680235	-	150677271;150679354	150679272;150680235	ES	0.33	50	50	ENSMUST00000156641.8	ENSMUSG00000032046.16	Abhd12	chr2	protein_coding	abhydrolase domain containing 12
chr2	150684211	150685311	-	150684211	150684431	5pMXE	0.5	50	50	ENSMUST00000156641.8	ENSMUSG00000032046.16	Abhd12	chr2	protein_coding	abhydrolase domain containing 12
chr2	150679630	150680235	-	150679354	150680235	A3SS	0.33	50	50	ENSMUST00000156641.8	ENSMUSG00000032046.16	Abhd12	chr2	protein_coding	abhydrolase domain containing 12
chr2	150679354	150680231	-	150679354	150680235	A5SS	0.5	50	50	ENSMUST00000156641.8	ENSMUSG00000032046.16	Abhd12	chr2	protein_coding	abhydrolase domain containing 12
chr2	150700404;150743455	150743415;150746277	-	150700404	150746277	cassetteExon	0.5	100	100	ENSMUST00000056149.15	ENSMUSG00000032046.16	Abhd12	chr2	protein_coding	abhydrolase domain containing 12
chr2	150690377	150693326	-	150690377	150700280	A5SS	0.5	50	50	ENSMUST00000056149.15	ENSMUSG00000032046.16	Abhd12	chr2	protein_coding	abhydrolase domain containing 12
chr2	150677271	150680235	-	150677271	150679272	A5SS&ES	0.5	50	50	ENSMUST00000141899.8	ENSMUSG00000032046.16	Abhd12	chr2	protein_coding	abhydrolase domain containing 12
chr2	150677271;150679630	150679272;150680235	-	150677271	150680235	cassetteExon	0.5	100	100	ENSMUST00000145826.2	ENSMUSG00000032046.16	Abhd12	chr2	protein_coding	abhydrolase domain containing 12
chr2	150677271	150680235	-	150679630	150680235	3pMXE	0.33	50	50	ENSMUST00000138608.8	ENSMUSG00000032046.16	Abhd12	chr2	protein_coding	abhydrolase domain containing 12
chr2	150751713	150754701	+	150747381	150754701	A5SS	0.5	50	50	ENSMUST00000152991.8	ENSMUSG00000027454.11	Gins1	chr2	protein_coding	GINS complex subunit 1 (Psf1 homolog)
chr2	150767918	150769198	+	150767918	150769962	A3SS	0.5	50	50	ENSMUST00000028948.5	ENSMUSG00000027454.11	Gins1	chr2	protein_coding	GINS complex subunit 1 (Psf1 homolog)
chr2	150787108	150794405	-	150787108;150792299	150791259;150794405	ES	0.5	50	50	ENSMUST00000109896.8	ENSMUSG00000068115.14	Ninl	chr2	protein_coding	ninein-like
chr2	150805415	150807998	-	150805415;150806190	150806054;150807998	ES	0.5	50	50	ENSMUST00000109896.8	ENSMUSG00000068115.14	Ninl	chr2	protein_coding	ninein-like
chr2	150808162	150812944	-	150808162;150812052	150811900;150812944	ES	0.33	50	50	ENSMUST00000109896.8	ENSMUSG00000068115.14	Ninl	chr2	protein_coding	ninein-like
chr2	150822111	150881157	-	150822111	150851151	5pMXE	0.5	50	50	ENSMUST00000109896.8	ENSMUSG00000068115.14	Ninl	chr2	protein_coding	ninein-like
chr2	150808162;150808284	150808244;150811900	-	150808162	150811900	cassetteExon	0.5	100	100	ENSMUST00000109896.8	ENSMUSG00000068115.14	Ninl	chr2	protein_coding	ninein-like
chr2	150808162;150808284	150808244;150812944	-	150808162;150812052	150811900;150812944	MXE	0.5	100	100	ENSMUST00000109896.8	ENSMUSG00000068115.14	Ninl	chr2	protein_coding	ninein-like
chr2	150792299	150794405	-	150787108	150794405	A3SS	0.5	50	50	ENSMUST00000124135.3	ENSMUSG00000068115.14	Ninl	chr2	protein_coding	ninein-like
chr2	150787108	150791259	-	150787108	150794405	A5SS	0.5	50	50	ENSMUST00000124135.3	ENSMUSG00000068115.14	Ninl	chr2	protein_coding	ninein-like
chr2	150808162	150812944	-	150808162;150808284	150808244;150812944	ES	0.33	50	50	ENSMUST00000150595.2	ENSMUSG00000068115.14	Ninl	chr2	protein_coding	ninein-like
chr2	150808284;150812052	150811900;150812944	-	150808284	150812944	cassetteExon	0.5	100	100	ENSMUST00000150595.2	ENSMUSG00000068115.14	Ninl	chr2	protein_coding	ninein-like
chr2	150808162	150811900	-	150808284	150811900	A3SS	0.5	50	50	ENSMUST00000149268.8	ENSMUSG00000068115.14	Ninl	chr2	protein_coding	ninein-like
chr2	150808162	150812944	-	150812052	150812944	A3SS&ES	0.33	50	50	ENSMUST00000149268.8	ENSMUSG00000068115.14	Ninl	chr2	protein_coding	ninein-like
chr2	150822111	150851151	-	150816090	150851151	A3SS	0.5	50	50	ENSMUST00000128564.8	ENSMUSG00000068115.14	Ninl	chr2	protein_coding	ninein-like
chr2	150816090	150817710	-	150816090	150851151	A5SS	0.5	50	50	ENSMUST00000128564.8	ENSMUSG00000068115.14	Ninl	chr2	protein_coding	ninein-like
chr2	150872836	150881157	-	150822111	150881157	A3SS	0.33	50	50	ENSMUST00000128627.2	ENSMUSG00000068115.14	Ninl	chr2	protein_coding	ninein-like
chr2	150880629	150881157	-	150822111	150881157	A3SS	0.33	50	50	ENSMUST00000128627.2	ENSMUSG00000068115.14	Ninl	chr2	protein_coding	ninein-like
chr2	150872836;150880629	150880536;150881157	-	150872836	150881157	cassetteExon	0.5	100	100	ENSMUST00000066640.5	ENSMUSG00000053916.5	Nanp	chr2	protein_coding	N-acetylneuraminic acid phosphatase
chr2	150929505	150930019	-	150929507	150930019	A3SS	0.5	50	50	ENSMUST00000109890.2	ENSMUSG00000079006.4	Gm14151	chr2	protein_coding	predicted gene 14151
chr2	151144014;151150555	151150402;151156015	+	151144014	151156015	cassetteExon	0.5	100	100	ENSMUST00000129286.2	ENSMUSG00000087609.2	4930442J19Rik	chr2	lncRNA	RIKEN cDNA 4930442J19 gene
chr2	151261648	151262077	-	151261648;151262000	151261742;151262077	ES	0.33	50	50	ENSMUST00000127020.8	ENSMUSG00000087495.8	Gm14152	chr2	lncRNA	predicted gene 14152
chr2	151262254	151274240	-	151262254;151267863	151267710;151274240	ES	0.5	50	50	ENSMUST00000127020.8	ENSMUSG00000087495.8	Gm14152	chr2	lncRNA	predicted gene 14152
chr2	151261093	151261578	-	151224080	151261578	A3SS	0.5	50	50	ENSMUST00000127020.8	ENSMUSG00000087495.8	Gm14152	chr2	lncRNA	predicted gene 14152
chr2	151261968	151262077	-	151262000	151262077	A3SS	0.33	50	50	ENSMUST00000127020.8	ENSMUSG00000087495.8	Gm14152	chr2	lncRNA	predicted gene 14152
chr2	151261648;151261968	151261742;151262077	-	151261648	151262077	cassetteExon	0.5	100	100	ENSMUST00000137471.8	ENSMUSG00000087495.8	Gm14152	chr2	lncRNA	predicted gene 14152
chr2	151342709	151344934	+	151342709;151344380	151344375;151344934	ES	0.5	50	50	ENSMUST00000089140.13	ENSMUSG00000027455.17	Nsfl1c	chr2	protein_coding	NSFL1 (p97) cofactor (p47)
chr2	151345099	151347273	+	151345099;151346123	151346031;151347273	ES	0.5	50	50	ENSMUST00000089140.13	ENSMUSG00000027455.17	Nsfl1c	chr2	protein_coding	NSFL1 (p97) cofactor (p47)
chr2	151342709	151344934	+	151344380	151344934	5pMXE	0.5	50	50	ENSMUST00000156182.2	ENSMUSG00000027455.17	Nsfl1c	chr2	protein_coding	NSFL1 (p97) cofactor (p47)
chr2	151345099	151347273	+	151345099	151346031	A3SS&ES	0.5	50	50	ENSMUST00000156182.2	ENSMUSG00000027455.17	Nsfl1c	chr2	protein_coding	NSFL1 (p97) cofactor (p47)
chr2	151345099	151347273	+	151346123	151347273	5pMXE	0.5	50	50	ENSMUST00000134081.2	ENSMUSG00000027455.17	Nsfl1c	chr2	protein_coding	NSFL1 (p97) cofactor (p47)
chr2	151384785;151386060	151385826;151399306	+	151384785	151399306	cassetteExon	0.5	100	100	ENSMUST00000044011.12	ENSMUSG00000032966.15	Fkbp1a	chr2	protein_coding	FK506 binding protein 1a
chr2	151384785;151386060	151385933;151399306	+	151384785	151399306	cassetteExon	0.5	100	100	ENSMUST00000044011.12	ENSMUSG00000032966.15	Fkbp1a	chr2	protein_coding	FK506 binding protein 1a
chr2	151384785;151387435	151387345;151399306	+	151384785	151399306	cassetteExon	0.5	100	100	ENSMUST00000044011.12	ENSMUSG00000032966.15	Fkbp1a	chr2	protein_coding	FK506 binding protein 1a
chr2	151401536	151402541	+	151401540	151402541	A5SS	0.5	50	50	ENSMUST00000044011.12	ENSMUSG00000032966.15	Fkbp1a	chr2	protein_coding	FK506 binding protein 1a
chr2	151384785;151386060	151385826;151399306	+	151384785;151387435	151387345;151399306	MXE	0.5	100	100	ENSMUST00000142985.8	ENSMUSG00000032966.15	Fkbp1a	chr2	protein_coding	FK506 binding protein 1a
chr2	151384785;151386060	151385933;151399306	+	151384785;151387435	151387345;151399306	MXE	0.5	100	100	ENSMUST00000142985.8	ENSMUSG00000032966.15	Fkbp1a	chr2	protein_coding	FK506 binding protein 1a
chr2	151384785	151385826	+	151384785	151385933	A3SS	0.25	50	50	ENSMUST00000137597.8	ENSMUSG00000032966.15	Fkbp1a	chr2	protein_coding	FK506 binding protein 1a
chr2	151384785	151399306	+	151386060	151399306	5pMXE	0.33	50	50	ENSMUST00000142271.2	ENSMUSG00000032966.15	Fkbp1a	chr2	protein_coding	FK506 binding protein 1a
chr2	151387435	151399306	+	151386060	151399306	A5SS	0.33	50	50	ENSMUST00000142271.2	ENSMUSG00000032966.15	Fkbp1a	chr2	protein_coding	FK506 binding protein 1a
chr2	151384785	151399306	+	151387435	151399306	5pMXE	0.33	50	50	ENSMUST00000132614.2	ENSMUSG00000032966.15	Fkbp1a	chr2	protein_coding	FK506 binding protein 1a
chr2	151439178	151442898	-	151439178;151442284	151442177;151442898	ES	0.33	50	50	ENSMUST00000094456.10	ENSMUSG00000027457.16	Snph	chr2	protein_coding	syntaphilin
chr2	151442994;151443551	151443518;151474068	-	151442994	151474068	cassetteExon	0.5	100	100	ENSMUST00000094456.10	ENSMUSG00000027457.16	Snph	chr2	protein_coding	syntaphilin
chr2	151442383	151442898	-	151442284	151442898	A3SS	0.33	50	50	ENSMUST00000094456.10	ENSMUSG00000027457.16	Snph	chr2	protein_coding	syntaphilin
chr2	151444328	151474068	-	151442994	151474068	A3SS	0.25	50	50	ENSMUST00000094456.10	ENSMUSG00000027457.16	Snph	chr2	protein_coding	syntaphilin
chr2	151464925	151474068	-	151442994	151474068	A3SS	0.25	50	50	ENSMUST00000094456.10	ENSMUSG00000027457.16	Snph	chr2	protein_coding	syntaphilin
chr2	151439178	151442898	-	151439178;151442383	151442177;151442898	ES	0.33	50	50	ENSMUST00000028951.14	ENSMUSG00000027457.16	Snph	chr2	protein_coding	syntaphilin
chr2	151443551;151444328	151444301;151474068	-	151443551	151474068	cassetteExon	0.5	100	100	ENSMUST00000146172.8	ENSMUSG00000027457.16	Snph	chr2	protein_coding	syntaphilin
chr2	151442994	151474068	-	151443551	151474068	A3SS	0.25	50	50	ENSMUST00000146172.8	ENSMUSG00000027457.16	Snph	chr2	protein_coding	syntaphilin
chr2	151464925	151474068	-	151443551	151474068	A3SS	0.25	50	50	ENSMUST00000146172.8	ENSMUSG00000027457.16	Snph	chr2	protein_coding	syntaphilin
chr2	151464925	151474068	-	151444328	151474068	A3SS	0.25	50	50	ENSMUST00000148755.8	ENSMUSG00000027457.16	Snph	chr2	protein_coding	syntaphilin
chr2	151499451	151500279	-	151499460	151500279	A3SS	0.5	50	50	ENSMUST00000180195.8	ENSMUSG00000074704.10	Rad21l	chr2	protein_coding	RAD21-like (S. pombe)
chr2	151522994;151526758	151526630;151527884	-	151522994	151527884	cassetteExon	0.5	100	100	ENSMUST00000149319.2	ENSMUSG00000087035.2	Tmem74bos	chr2	protein_coding	transmembrane 74B, opposite strand
chr2	151571596	151577394	-	151571596;151576224	151576142;151577394	ES	0.5	50	50	ENSMUST00000042452.11	ENSMUSG00000032869.16	Psmf1	chr2	protein_coding	proteasome (prosome, macropain) inhibitor subunit 1
chr2	151571596;151577546	151577394;151582931	-	151571596	151582931	cassetteExon	0.5	100	100	ENSMUST00000155939.8	ENSMUSG00000032869.16	Psmf1	chr2	protein_coding	proteasome (prosome, macropain) inhibitor subunit 1
chr2	151571596	151576142	-	151571596	151582931	A5SS	0.33	50	50	ENSMUST00000155939.8	ENSMUSG00000032869.16	Psmf1	chr2	protein_coding	proteasome (prosome, macropain) inhibitor subunit 1
chr2	151812844	151821913	-	151812844	151815530	5pMXE	0.25	50	50	ENSMUST00000109865.8	ENSMUSG00000027459.17	Fam110a	chr2	protein_coding	family with sequence similarity 110, member A
chr2	151812844	151815219	-	151812844	151815530	A5SS	0.25	50	50	ENSMUST00000109865.8	ENSMUSG00000027459.17	Fam110a	chr2	protein_coding	family with sequence similarity 110, member A
chr2	151812844	151815823	-	151812844	151815530	A5SS	0.25	50	50	ENSMUST00000109865.8	ENSMUSG00000027459.17	Fam110a	chr2	protein_coding	family with sequence similarity 110, member A
chr2	151812844	151821913	-	151812844	151815823	5pMXE	0.25	50	50	ENSMUST00000109864.8	ENSMUSG00000027459.17	Fam110a	chr2	protein_coding	family with sequence similarity 110, member A
chr2	151812844	151815219	-	151812844	151815823	A5SS	0.25	50	50	ENSMUST00000109864.8	ENSMUSG00000027459.17	Fam110a	chr2	protein_coding	family with sequence similarity 110, member A
chr2	151812844	151815219	-	151812844	151821913	A5SS	0.25	50	50	ENSMUST00000062047.6	ENSMUSG00000027459.17	Fam110a	chr2	protein_coding	family with sequence similarity 110, member A
chr2	151846598;151847939	151847452;151849401	+	151846598	151849401	cassetteExon	0.5	100	100	ENSMUST00000109859.9	ENSMUSG00000027463.15	Slc52a3	chr2	protein_coding	solute carrier protein family 52, member 3
chr2	151841858	151845972	+	151838571	151845972	A5SS	0.5	50	50	ENSMUST00000109859.9	ENSMUSG00000027463.15	Slc52a3	chr2	protein_coding	solute carrier protein family 52, member 3
chr2	151947476	151950909	+	151947658	151950909	A5SS	0.33	50	50	ENSMUST00000137751.2	ENSMUSG00000032802.9	Srxn1	chr2	protein_coding	sulfiredoxin 1 homolog (S. cerevisiae)
chr2	151947867	151950909	+	151947658	151950909	A5SS	0.33	50	50	ENSMUST00000137751.2	ENSMUSG00000032802.9	Srxn1	chr2	protein_coding	sulfiredoxin 1 homolog (S. cerevisiae)
chr2	151947867	151950909	+	151947476	151950909	A5SS	0.33	50	50	ENSMUST00000128882.2	ENSMUSG00000032802.9	Srxn1	chr2	protein_coding	sulfiredoxin 1 homolog (S. cerevisiae)
chr2	152096241	152099861	+	152096241;152099399	152099298;152099861	ES	0.5	50	50	ENSMUST00000099224.10	ENSMUSG00000074698.11	Csnk2a1	chr2	protein_coding	casein kinase 2, alpha 1 polypeptide
chr2	152068952	152092322	+	152068911	152092322	A5SS	0.5	50	50	ENSMUST00000099224.10	ENSMUSG00000074698.11	Csnk2a1	chr2	protein_coding	casein kinase 2, alpha 1 polypeptide
chr2	152096241	152099861	+	152096241	152099298	3pMXE	0.5	50	50	ENSMUST00000133119.2	ENSMUSG00000074698.11	Csnk2a1	chr2	protein_coding	casein kinase 2, alpha 1 polypeptide
chr2	152135960	152146866	+	152135960;152144257	152144072;152146866	ES	0.5	50	50	ENSMUST00000028963.14	ENSMUSG00000027465.14	Tbc1d20	chr2	protein_coding	TBC1 domain family, member 20
chr2	152136439	152144072	+	152135960	152144072	A5SS	0.5	50	50	ENSMUST00000028963.14	ENSMUSG00000027465.14	Tbc1d20	chr2	protein_coding	TBC1 domain family, member 20
chr2	152161340	152164080	-	152161223	152164080	A3SS	0.5	50	50	ENSMUST00000130165.8	ENSMUSG00000027466.16	Rbck1	chr2	protein_coding	RanBP-type and C3HC4-type zinc finger containing 1
chr2	152168334;152169031	152168976;152169167	-	152168334	152169167	cassetteExon	0.5	100	100	ENSMUST00000109847.9	ENSMUSG00000027466.16	Rbck1	chr2	protein_coding	RanBP-type and C3HC4-type zinc finger containing 1
chr2	152169260	152169626	-	152169260	152172880	A5SS	0.5	50	50	ENSMUST00000109847.9	ENSMUSG00000027466.16	Rbck1	chr2	protein_coding	RanBP-type and C3HC4-type zinc finger containing 1
chr2	152185203	152185777	-	152185247	152185777	A3SS	0.5	50	50	ENSMUST00000040312.7	ENSMUSG00000032715.10	Trib3	chr2	protein_coding	tribbles pseudokinase 3
chr2	152269685	152269761	+	152269685	152269861	A3SS	0.5	50	50	ENSMUST00000039961.12	ENSMUSG00000032680.12	6820408C15Rik	chr2	protein_coding	RIKEN cDNA 6820408C15 gene
chr2	152270944	152275953	+	152270944	152275956	A3SS	0.5	50	50	ENSMUST00000039961.12	ENSMUSG00000032680.12	6820408C15Rik	chr2	protein_coding	RIKEN cDNA 6820408C15 gene
chr2	152283200	152284294	+	152283222	152284294	A5SS	0.5	50	50	ENSMUST00000039961.12	ENSMUSG00000032680.12	6820408C15Rik	chr2	protein_coding	RIKEN cDNA 6820408C15 gene
chr2	152405007	152405096	+	152405007	152411253	A3SS	0.5	50	50	ENSMUST00000238626.2	ENSMUSG00000090485.3	Gm17416	chr2	protein_coding	predicted gene, 17416
chr2	152435351	152441114	-	152435351	152438259	5pMXE	0.5	50	50	ENSMUST00000109834.3	ENSMUSG00000062124.8	Defb45	chr2	protein_coding	defensin beta 45
chr2	152468966	152469979	+	152468966	152469820	A3SS	0.5	50	50	ENSMUST00000000369.4	ENSMUSG00000000359.4	Rem1	chr2	protein_coding	rad and gem related GTP binding protein 1
chr2	152530668	152531764	+	152530668;152530882	152530757;152531764	ES	0.5	50	50	ENSMUST00000125366.8	ENSMUSG00000019188.17	H13	chr2	protein_coding	histocompatibility 13
chr2	152533796	152537402	+	152533796;152536443	152536407;152537402	ES	0.5	50	50	ENSMUST00000125366.8	ENSMUSG00000019188.17	H13	chr2	protein_coding	histocompatibility 13
chr2	152542188;152546114	152545915;152546542	+	152542188	152546542	cassetteExon	0.5	100	100	ENSMUST00000125366.8	ENSMUSG00000019188.17	H13	chr2	protein_coding	histocompatibility 13
chr2	152542188	152546542	+	152542188	152545915	3pMXE	0.5	50	50	ENSMUST00000079247.4	ENSMUSG00000019188.17	H13	chr2	protein_coding	histocompatibility 13
chr2	152672040	152673523	-	152672022	152673523	A3SS	0.5	50	50	ENSMUST00000007803.12	ENSMUSG00000007659.19	Bcl2l1	chr2	protein_coding	BCL2-like 1
chr2	152624202	152670367	-	152624202	152671347	A5SS	0.5	50	50	ENSMUST00000007803.12	ENSMUSG00000007659.19	Bcl2l1	chr2	protein_coding	BCL2-like 1
chr2	152672022	152672107	-	152672022	152673523	A5SS	0.25	50	50	ENSMUST00000007803.12	ENSMUSG00000007659.19	Bcl2l1	chr2	protein_coding	BCL2-like 1
chr2	152672022	152672306	-	152672022	152673523	A5SS	0.25	50	50	ENSMUST00000007803.12	ENSMUSG00000007659.19	Bcl2l1	chr2	protein_coding	BCL2-like 1
chr2	152672022	152672461	-	152672022	152673523	A5SS	0.25	50	50	ENSMUST00000007803.12	ENSMUSG00000007659.19	Bcl2l1	chr2	protein_coding	BCL2-like 1
chr2	152672040	152672306	-	152672022	152672306	A3SS	0.5	50	50	ENSMUST00000109820.5	ENSMUSG00000007659.19	Bcl2l1	chr2	protein_coding	BCL2-like 1
chr2	152672022	152672107	-	152672022	152672306	A5SS	0.25	50	50	ENSMUST00000109820.5	ENSMUSG00000007659.19	Bcl2l1	chr2	protein_coding	BCL2-like 1
chr2	152672022	152672461	-	152672022	152672306	A5SS	0.25	50	50	ENSMUST00000109820.5	ENSMUSG00000007659.19	Bcl2l1	chr2	protein_coding	BCL2-like 1
chr2	152672022	152672461	-	152672022	152672107	5pMXE	0.25	50	50	ENSMUST00000140436.2	ENSMUSG00000007659.19	Bcl2l1	chr2	protein_coding	BCL2-like 1
chr2	152672040	152673523	-	152672040	152672306	5pMXE	0.5	50	50	ENSMUST00000146380.2	ENSMUSG00000007659.19	Bcl2l1	chr2	protein_coding	BCL2-like 1
chr2	152690217;152690431	152690297;152696841	+	152690217	152696841	cassetteExon	0.5	100	100	ENSMUST00000164120.8	ENSMUSG00000027469.17	Tpx2	chr2	protein_coding	TPX2, microtubule-associated
chr2	152690029	152696841	+	152690217	152696841	A5SS	0.33	50	50	ENSMUST00000164120.8	ENSMUSG00000027469.17	Tpx2	chr2	protein_coding	TPX2, microtubule-associated
chr2	152696922	152709104	+	152696935	152709104	A5SS	0.5	50	50	ENSMUST00000164120.8	ENSMUSG00000027469.17	Tpx2	chr2	protein_coding	TPX2, microtubule-associated
chr2	152696922	152709104	+	152696922	152709107	A3SS	0.5	50	50	ENSMUST00000178997.8	ENSMUSG00000027469.17	Tpx2	chr2	protein_coding	TPX2, microtubule-associated
chr2	152690431	152696841	+	152690029	152696841	A5SS	0.33	50	50	ENSMUST00000178997.8	ENSMUSG00000027469.17	Tpx2	chr2	protein_coding	TPX2, microtubule-associated
chr2	152791040	152793255	-	152791040;152792574	152792541;152793255	ES	0.5	50	50	ENSMUST00000123121.9	ENSMUSG00000042662.17	Dusp15	chr2	protein_coding	dual specificity phosphatase-like 15
chr2	152787077	152787347	-	152786242	152787347	A3SS	0.5	50	50	ENSMUST00000123121.9	ENSMUSG00000042662.17	Dusp15	chr2	protein_coding	dual specificity phosphatase-like 15
chr2	152804475	152818071	+	152804475;152814251	152814208;152818071	ES	0.33	50	50	ENSMUST00000099197.9	ENSMUSG00000074673.16	Ttll9	chr2	protein_coding	tubulin tyrosine ligase-like family, member 9
chr2	152825086	152831514	+	152825086;152826241	152826056;152831514	ES	0.5	50	50	ENSMUST00000099197.9	ENSMUSG00000074673.16	Ttll9	chr2	protein_coding	tubulin tyrosine ligase-like family, member 9
chr2	152831582	152833498	+	152831582;152832018	152831944;152833498	ES	0.33	50	50	ENSMUST00000099197.9	ENSMUSG00000074673.16	Ttll9	chr2	protein_coding	tubulin tyrosine ligase-like family, member 9
chr2	152835129	152841219	+	152835129;152836071	152835984;152841219	ES	0.5	50	50	ENSMUST00000099197.9	ENSMUSG00000074673.16	Ttll9	chr2	protein_coding	tubulin tyrosine ligase-like family, member 9
chr2	152825086	152826001	+	152825086	152826056	A3SS	0.33	50	50	ENSMUST00000099197.9	ENSMUSG00000074673.16	Ttll9	chr2	protein_coding	tubulin tyrosine ligase-like family, member 9
chr2	152815524	152818071	+	152814251	152818071	A5SS	0.33	50	50	ENSMUST00000099197.9	ENSMUSG00000074673.16	Ttll9	chr2	protein_coding	tubulin tyrosine ligase-like family, member 9
chr2	152825086	152831514	+	152825086;152826241	152826001;152831514	ES	0.5	50	50	ENSMUST00000152158.8	ENSMUSG00000074673.16	Ttll9	chr2	protein_coding	tubulin tyrosine ligase-like family, member 9
chr2	152815524	152818071	+	152804475	152818071	A5SS	0.33	50	50	ENSMUST00000146626.9	ENSMUSG00000074673.16	Ttll9	chr2	protein_coding	tubulin tyrosine ligase-like family, member 9
chr2	152804475	152818071	+	152814251	152818071	5pMXE	0.33	50	50	ENSMUST00000165343.8	ENSMUSG00000074673.16	Ttll9	chr2	protein_coding	tubulin tyrosine ligase-like family, member 9
chr2	152818163	152824975	+	152818163	152833498	A3SS	0.5	50	50	ENSMUST00000165343.8	ENSMUSG00000074673.16	Ttll9	chr2	protein_coding	tubulin tyrosine ligase-like family, member 9
chr2	152831582	152833498	+	152818163	152833498	A5SS	0.33	50	50	ENSMUST00000165343.8	ENSMUSG00000074673.16	Ttll9	chr2	protein_coding	tubulin tyrosine ligase-like family, member 9
chr2	152832018	152833498	+	152818163	152833498	A5SS	0.33	50	50	ENSMUST00000165343.8	ENSMUSG00000074673.16	Ttll9	chr2	protein_coding	tubulin tyrosine ligase-like family, member 9
chr2	152825086	152831514	+	152825086	152826056	3pMXE	0.33	50	50	ENSMUST00000155631.3	ENSMUSG00000074673.16	Ttll9	chr2	protein_coding	tubulin tyrosine ligase-like family, member 9
chr2	152854375;152855227	152855143;152855930	-	152854375	152855930	cassetteExon	0.5	100	100	ENSMUST00000028972.9	ENSMUSG00000027472.15	Pdrg1	chr2	protein_coding	p53 and DNA damage regulated 1
chr2	152856050	152857154	-	152856005	152857154	A3SS	0.33	50	50	ENSMUST00000028972.9	ENSMUSG00000027472.15	Pdrg1	chr2	protein_coding	p53 and DNA damage regulated 1
chr2	152856202	152857154	-	152856005	152857154	A3SS	0.33	50	50	ENSMUST00000028972.9	ENSMUSG00000027472.15	Pdrg1	chr2	protein_coding	p53 and DNA damage regulated 1
chr2	152856005	152857128	-	152856005	152857154	A5SS	0.5	50	50	ENSMUST00000028972.9	ENSMUSG00000027472.15	Pdrg1	chr2	protein_coding	p53 and DNA damage regulated 1
chr2	152856202	152857154	-	152856050	152857154	A3SS	0.33	50	50	ENSMUST00000123083.2	ENSMUSG00000027472.15	Pdrg1	chr2	protein_coding	p53 and DNA damage regulated 1
chr2	152916827	152920402	+	152916827;152918384	152918321;152920402	ES	0.5	50	50	ENSMUST00000127898.9	ENSMUSG00000027474.14	Ccm2l	chr2	protein_coding	cerebral cavernous malformation 2-like
chr2	152912644	152912745	+	152912644	152912742	A3SS	0.5	50	50	ENSMUST00000127898.9	ENSMUSG00000027474.14	Ccm2l	chr2	protein_coding	cerebral cavernous malformation 2-like
chr2	152912925	152913678	+	152912936	152913678	A5SS	0.5	50	50	ENSMUST00000127898.9	ENSMUSG00000027474.14	Ccm2l	chr2	protein_coding	cerebral cavernous malformation 2-like
chr2	153003491	153020806	+	153003491	153020809	A3SS	0.5	50	50	ENSMUST00000137446.8	ENSMUSG00000068040.11	Tm9sf4	chr2	protein_coding	transmembrane 9 superfamily member 4
chr2	153037485	153040274	+	153037485	153040270	A3SS	0.5	50	50	ENSMUST00000137446.8	ENSMUSG00000068040.11	Tm9sf4	chr2	protein_coding	transmembrane 9 superfamily member 4
chr2	153030969	153032751	+	153030997	153032751	A5SS	0.5	50	50	ENSMUST00000137446.8	ENSMUSG00000068040.11	Tm9sf4	chr2	protein_coding	transmembrane 9 superfamily member 4
chr2	153036590	153037231	+	153036329	153037231	A5SS	0.5	50	50	ENSMUST00000137446.8	ENSMUSG00000068040.11	Tm9sf4	chr2	protein_coding	transmembrane 9 superfamily member 4
chr2	153078092	153079579	-	153078092	153083196	A5SS	0.5	50	50	ENSMUST00000056924.14	ENSMUSG00000051413.18	Plagl2	chr2	protein_coding	pleiomorphic adenoma gene-like 2
chr2	153083645	153090369	+	153083645;153085679	153085558;153090369	ES	0.5	50	50	ENSMUST00000049863.12	ENSMUSG00000046020.14	Pofut1	chr2	protein_coding	protein O-fucosyltransferase 1
chr2	153101712	153103121	+	153101712	153103118	A3SS	0.5	50	50	ENSMUST00000049863.12	ENSMUSG00000046020.14	Pofut1	chr2	protein_coding	protein O-fucosyltransferase 1
chr2	153103360	153103467	+	153103360	153107615	A3SS	0.5	50	50	ENSMUST00000049863.12	ENSMUSG00000046020.14	Pofut1	chr2	protein_coding	protein O-fucosyltransferase 1
chr2	153083645	153085558	+	153083645	153101520	A3SS	0.33	50	50	ENSMUST00000099191.5	ENSMUSG00000046020.14	Pofut1	chr2	protein_coding	protein O-fucosyltransferase 1
chr2	153083645	153090369	+	153083645	153101520	A3SS	0.33	50	50	ENSMUST00000099191.5	ENSMUSG00000046020.14	Pofut1	chr2	protein_coding	protein O-fucosyltransferase 1
chr2	153091713	153101520	+	153083645	153101520	A5SS	0.5	50	50	ENSMUST00000099191.5	ENSMUSG00000046020.14	Pofut1	chr2	protein_coding	protein O-fucosyltransferase 1
chr2	153184784	153187797	-	153184784	153187541	5pMXE	0.33	50	50	ENSMUST00000128026.2	ENSMUSG00000073236.5	2500004C02Rik	chr2	lncRNA	RIKEN cDNA 2500004C02 gene
chr2	153184784	153185090	-	153184784	153187541	A5SS	0.33	50	50	ENSMUST00000128026.2	ENSMUSG00000073236.5	2500004C02Rik	chr2	lncRNA	RIKEN cDNA 2500004C02 gene
chr2	153184784	153187797	-	153184784	153185090	5pMXE	0.33	50	50	ENSMUST00000125345.2	ENSMUSG00000073236.5	2500004C02Rik	chr2	lncRNA	RIKEN cDNA 2500004C02 gene
chr2	153194191;153196572	153196570;153198990	+	153194191	153198990	cassetteExon	0.5	100	100	ENSMUST00000227428.2	ENSMUSG00000042548.15	Asxl1	chr2	protein_coding	ASXL transcriptional regulator 1
chr2	153189959	153194109	+	153188310	153194109	A5SS	0.5	50	50	ENSMUST00000227428.2	ENSMUSG00000042548.15	Asxl1	chr2	protein_coding	ASXL transcriptional regulator 1
chr2	153319902;153322485	153322342;153325607	-	153319902	153325607	cassetteExon	0.5	100	100	ENSMUST00000035346.14	ENSMUSG00000061411.13	Nol4l	chr2	protein_coding	nucleolar protein 4-like
chr2	153296043	153312608	-	153278267	153312608	A3SS	0.33	50	50	ENSMUST00000035346.14	ENSMUSG00000061411.13	Nol4l	chr2	protein_coding	nucleolar protein 4-like
chr2	153305684	153312608	-	153278267	153312608	A3SS	0.33	50	50	ENSMUST00000035346.14	ENSMUSG00000061411.13	Nol4l	chr2	protein_coding	nucleolar protein 4-like
chr2	153260065	153262470	-	153260065	153262452	A5SS	0.5	50	50	ENSMUST00000035346.14	ENSMUSG00000061411.13	Nol4l	chr2	protein_coding	nucleolar protein 4-like
chr2	153278267	153286277	-	153278267	153312608	A5SS	0.33	50	50	ENSMUST00000035346.14	ENSMUSG00000061411.13	Nol4l	chr2	protein_coding	nucleolar protein 4-like
chr2	153278267	153287435	-	153278267	153312608	A5SS	0.33	50	50	ENSMUST00000035346.14	ENSMUSG00000061411.13	Nol4l	chr2	protein_coding	nucleolar protein 4-like
chr2	153319902	153321444	-	153319902	153325607	A5SS	0.33	50	50	ENSMUST00000035346.14	ENSMUSG00000061411.13	Nol4l	chr2	protein_coding	nucleolar protein 4-like
chr2	153325762	153333279	-	153325762	153371362	A5SS	0.5	50	50	ENSMUST00000035346.14	ENSMUSG00000061411.13	Nol4l	chr2	protein_coding	nucleolar protein 4-like
chr2	153278267	153287435	-	153278267	153286277	5pMXE	0.33	50	50	ENSMUST00000109784.2	ENSMUSG00000061411.13	Nol4l	chr2	protein_coding	nucleolar protein 4-like
chr2	153305684	153312608	-	153296043	153312608	A3SS	0.33	50	50	ENSMUST00000137553.8	ENSMUSG00000061411.13	Nol4l	chr2	protein_coding	nucleolar protein 4-like
chr2	153319902	153321444	-	153319902	153322342	A5SS	0.33	50	50	ENSMUST00000129385.8	ENSMUSG00000061411.13	Nol4l	chr2	protein_coding	nucleolar protein 4-like
chr2	153471166;153474182	153474108;153474514	-	153471166	153474514	cassetteExon	0.5	100	100	ENSMUST00000071852.10	ENSMUSG00000056941.18	Commd7	chr2	protein_coding	COMM domain containing 7
chr2	153512367	153514136	+	153512367;153512828	153512769;153514136	ES	0.5	50	50	ENSMUST00000072997.10	ENSMUSG00000027478.16	Dnmt3b	chr2	protein_coding	DNA methyltransferase 3B
chr2	153491660;153492819	153492705;153503345	+	153491660	153503345	cassetteExon	0.5	100	100	ENSMUST00000072997.10	ENSMUSG00000027478.16	Dnmt3b	chr2	protein_coding	DNA methyltransferase 3B
chr2	153516964	153517646	+	153516964	153517649	A3SS	0.5	50	50	ENSMUST00000072997.10	ENSMUSG00000027478.16	Dnmt3b	chr2	protein_coding	DNA methyltransferase 3B
chr2	153520476	153525528	+	153520476	153528178	A3SS	0.5	50	50	ENSMUST00000103151.8	ENSMUSG00000027478.16	Dnmt3b	chr2	protein_coding	DNA methyltransferase 3B
chr2	153526397	153528178	+	153520476	153528178	A5SS	0.5	50	50	ENSMUST00000103151.8	ENSMUSG00000027478.16	Dnmt3b	chr2	protein_coding	DNA methyltransferase 3B
chr2	153583574	153588176	+	153583339	153588176	A5SS	0.33	50	50	ENSMUST00000028981.9	ENSMUSG00000027479.15	Mapre1	chr2	protein_coding	microtubule-associated protein, RP/EB family, member 1
chr2	153587730	153588176	+	153583339	153588176	A5SS	0.33	50	50	ENSMUST00000028981.9	ENSMUSG00000027479.15	Mapre1	chr2	protein_coding	microtubule-associated protein, RP/EB family, member 1
chr2	153587730	153588176	+	153583574	153588176	A5SS	0.33	50	50	ENSMUST00000123795.8	ENSMUSG00000027479.15	Mapre1	chr2	protein_coding	microtubule-associated protein, RP/EB family, member 1
chr2	153629672	153631072	+	153629672	153631076	A3SS	0.5	50	50	ENSMUST00000126656.4	ENSMUSG00000044083.13	Efcab8	chr2	protein_coding	EF-hand calcium binding domain 8
chr2	153636392	153636685	+	153636392	153639563	A3SS	0.5	50	50	ENSMUST00000126656.4	ENSMUSG00000044083.13	Efcab8	chr2	protein_coding	EF-hand calcium binding domain 8
chr2	153631340	153634628	+	153631179	153634628	A5SS	0.5	50	50	ENSMUST00000126656.4	ENSMUSG00000044083.13	Efcab8	chr2	protein_coding	EF-hand calcium binding domain 8
chr2	153710205;153711178	153711104;153711335	-	153710205	153711335	cassetteExon	0.5	100	100	ENSMUST00000028982.5	ENSMUSG00000027480.13	Sun5	chr2	protein_coding	Sad1 and UNC84 domain containing 5
chr2	153711390	153712845	-	153709491	153712845	A3SS	0.5	50	50	ENSMUST00000124414.8	ENSMUSG00000027480.13	Sun5	chr2	protein_coding	Sad1 and UNC84 domain containing 5
chr2	153709491	153710139	-	153709491	153712845	A5SS	0.5	50	50	ENSMUST00000124414.8	ENSMUSG00000027480.13	Sun5	chr2	protein_coding	Sad1 and UNC84 domain containing 5
chr2	153742339	153744553	+	153742339;153743925	153743820;153744553	ES	0.5	50	50	ENSMUST00000088955.12	ENSMUSG00000068009.12	Bpifb6	chr2	protein_coding	BPI fold containing family B, member 6
chr2	153760365	153761542	+	153760278	153761542	A5SS	0.5	50	50	ENSMUST00000088950.8	ENSMUSG00000068008.9	Bpifb3	chr2	protein_coding	BPI fold containing family B, member 3
chr2	153850322	153851033	+	153850231	153851033	A5SS	0.5	50	50	ENSMUST00000048103.9	ENSMUSG00000042459.9	Bpifa2	chr2	protein_coding	BPI fold containing family A, member 2
chr2	153978335;153978754	153978675;153979035	+	153978335	153979035	cassetteExon	0.5	100	100	ENSMUST00000028984.13	ENSMUSG00000027482.13	Bpifa3	chr2	protein_coding	BPI fold containing family A, member 3
chr2	153979561	153980060	+	153979561	153980055	A3SS	0.5	50	50	ENSMUST00000028984.13	ENSMUSG00000027482.13	Bpifa3	chr2	protein_coding	BPI fold containing family A, member 3
chr2	153986271	153986720	+	153986271	153987547	A3SS	0.5	50	50	ENSMUST00000028985.8	ENSMUSG00000027483.8	Bpifa1	chr2	protein_coding	BPI fold containing family A, member 1
chr2	153989243	153989448	+	153989243	153989545	A3SS	0.5	50	50	ENSMUST00000028985.8	ENSMUSG00000027483.8	Bpifa1	chr2	protein_coding	BPI fold containing family A, member 1
chr2	154042338	154044493	+	154032813	154044493	A5SS	0.5	50	50	ENSMUST00000081816.11	ENSMUSG00000027485.16	Bpifb1	chr2	protein_coding	BPI fold containing family B, member 1
chr2	154109842	154111359	+	154109842;154110118	154110088;154111359	ES	0.5	50	50	ENSMUST00000088924.7	ENSMUSG00000067998.12	Bpifb9a	chr2	protein_coding	BPI fold containing family B, member 9A
chr2	154187935	154192738	-	154187935;154190701	154190571;154192738	ES	0.5	50	50	ENSMUST00000109731.8	ENSMUSG00000027487.12	Cdk5rap1	chr2	protein_coding	CDK5 regulatory subunit associated protein 1
chr2	154203785	154207882	-	154202687	154207882	A3SS	0.5	50	50	ENSMUST00000109731.8	ENSMUSG00000027487.12	Cdk5rap1	chr2	protein_coding	CDK5 regulatory subunit associated protein 1
chr2	154212875	154214502	-	154212875	154214601	A5SS	0.5	50	50	ENSMUST00000109731.8	ENSMUSG00000027487.12	Cdk5rap1	chr2	protein_coding	CDK5 regulatory subunit associated protein 1
chr2	154220124	154222594	-	154220136	154222594	A3SS	0.5	50	50	ENSMUST00000028991.7	ENSMUSG00000027488.13	Snta1	chr2	protein_coding	syntrophin, acidic 1
chr2	154242199	154245642	-	154225904	154245642	A3SS	0.5	50	50	ENSMUST00000028991.7	ENSMUSG00000027488.13	Snta1	chr2	protein_coding	syntrophin, acidic 1
chr2	154278556	154346473	+	154278556;154342463	154342320;154346473	ES	0.5	50	50	ENSMUST00000109725.8	ENSMUSG00000038533.16	Cbfa2t2	chr2	protein_coding	CBFA2/RUNX1 translocation partner 2
chr2	154366019	154366434	+	154366019	154370757	A3SS	0.5	50	50	ENSMUST00000109725.8	ENSMUSG00000038533.16	Cbfa2t2	chr2	protein_coding	CBFA2/RUNX1 translocation partner 2
chr2	154370825	154373142	+	154370825	154373145	A3SS	0.5	50	50	ENSMUST00000109725.8	ENSMUSG00000038533.16	Cbfa2t2	chr2	protein_coding	CBFA2/RUNX1 translocation partner 2
chr2	154278968	154342320	+	154278556	154342320	A5SS	0.5	50	50	ENSMUST00000109725.8	ENSMUSG00000038533.16	Cbfa2t2	chr2	protein_coding	CBFA2/RUNX1 translocation partner 2
chr2	154352517	154357737	+	154352517	154363071	A3SS	0.5	50	50	ENSMUST00000137526.2	ENSMUSG00000038533.16	Cbfa2t2	chr2	protein_coding	CBFA2/RUNX1 translocation partner 2
chr2	154359882	154363071	+	154352517	154363071	A5SS	0.5	50	50	ENSMUST00000137526.2	ENSMUSG00000038533.16	Cbfa2t2	chr2	protein_coding	CBFA2/RUNX1 translocation partner 2
chr2	154396845;154397876	154397815;154398977	-	154396845;154397612	154397504;154398977	MXE	0.5	100	100	ENSMUST00000109716.9	ENSMUSG00000027489.16	Necab3	chr2	protein_coding	N-terminal EF-hand calcium binding protein 3
chr2	154388643	154388721	-	154388242	154388721	A3SS	0.5	50	50	ENSMUST00000109716.9	ENSMUSG00000027489.16	Necab3	chr2	protein_coding	N-terminal EF-hand calcium binding protein 3
chr2	154396845	154398970	-	154396845	154397504	A5SS&ES	0.33	50	50	ENSMUST00000109716.9	ENSMUSG00000027489.16	Necab3	chr2	protein_coding	N-terminal EF-hand calcium binding protein 3
chr2	154396845	154397815	-	154396845	154398970	A5SS	0.33	50	50	ENSMUST00000125793.2	ENSMUSG00000027489.16	Necab3	chr2	protein_coding	N-terminal EF-hand calcium binding protein 3
chr2	154390987	154391217	+	154390987	154391257	A3SS	0.33	50	50	ENSMUST00000135641.2	ENSMUSG00000038523.11	1700003F12Rik	chr2	protein_coding	RIKEN cDNA 1700003F12 gene
chr2	154390987	154391217	+	154390987	154391256	A3SS	0.33	50	50	ENSMUST00000045116.11	ENSMUSG00000038523.11	1700003F12Rik	chr2	protein_coding	RIKEN cDNA 1700003F12 gene
chr2	154390987	154391257	+	154390987	154391256	A3SS	0.33	50	50	ENSMUST00000045116.11	ENSMUSG00000038523.11	1700003F12Rik	chr2	protein_coding	RIKEN cDNA 1700003F12 gene
chr2	154406428	154410987	-	154406428	154411409	A5SS	0.5	50	50	ENSMUST00000103145.11	ENSMUSG00000027490.18	E2f1	chr2	protein_coding	E2F transcription factor 1
chr2	154437490	154438122	-	154434283	154438122	A3SS	0.5	50	50	ENSMUST00000000896.11	ENSMUSG00000000876.12	Pxmp4	chr2	protein_coding	peroxisomal membrane protein 4
chr2	154463783	154468698	+	154463783;154466971	154466775;154468698	ES	0.5	50	50	ENSMUST00000081926.13	ENSMUSG00000059842.13	Zfp341	chr2	protein_coding	zinc finger protein 341
chr2	154470894	154472329	+	154470915	154472329	A5SS	0.5	50	50	ENSMUST00000081926.13	ENSMUSG00000059842.13	Zfp341	chr2	protein_coding	zinc finger protein 341
chr2	154499291	154531438	+	154493895	154531438	A5SS	0.5	50	50	ENSMUST00000151668.8	ENSMUSG00000038467.16	Chmp4b	chr2	protein_coding	charged multivesicular body protein 4B
chr2	154564506	154575310	-	154564506	154565398	5pMXE	0.5	50	50	ENSMUST00000136046.2	ENSMUSG00000085691.2	Gm14216	chr2	lncRNA	predicted gene 14216
chr2	154633468;154663009	154662927;154699189	+	154633468	154699189	cassetteExon	0.5	100	100	ENSMUST00000109701.10	ENSMUSG00000027593.16	Raly	chr2	protein_coding	hnRNP-associated with lethal yellow
chr2	154701670;154701878	154701831;154703760	+	154701670	154703760	cassetteExon	0.5	100	100	ENSMUST00000109701.10	ENSMUSG00000027593.16	Raly	chr2	protein_coding	hnRNP-associated with lethal yellow
chr2	154633468	154636319	+	154633468	154699189	A3SS	0.33	50	50	ENSMUST00000109701.10	ENSMUSG00000027593.16	Raly	chr2	protein_coding	hnRNP-associated with lethal yellow
chr2	154633151	154699189	+	154633468	154699189	A5SS	0.33	50	50	ENSMUST00000109701.10	ENSMUSG00000027593.16	Raly	chr2	protein_coding	hnRNP-associated with lethal yellow
chr2	154633151	154699189	+	154633151;154663009	154662927;154699189	ES	0.33	50	50	ENSMUST00000129137.8	ENSMUSG00000027593.16	Raly	chr2	protein_coding	hnRNP-associated with lethal yellow
chr2	154663009	154686366	+	154663009	154699189	A3SS	0.5	50	50	ENSMUST00000129137.8	ENSMUSG00000027593.16	Raly	chr2	protein_coding	hnRNP-associated with lethal yellow
chr2	154633468	154662927	+	154633151	154662927	A5SS	0.25	50	50	ENSMUST00000129137.8	ENSMUSG00000027593.16	Raly	chr2	protein_coding	hnRNP-associated with lethal yellow
chr2	154633468	154699189	+	154663009	154699189	A5SS&ES	0.33	50	50	ENSMUST00000129137.8	ENSMUSG00000027593.16	Raly	chr2	protein_coding	hnRNP-associated with lethal yellow
chr2	154633705	154662927	+	154633151	154662927	A5SS	0.25	50	50	ENSMUST00000129137.8	ENSMUSG00000027593.16	Raly	chr2	protein_coding	hnRNP-associated with lethal yellow
chr2	154636387	154662927	+	154633151	154662927	A5SS	0.25	50	50	ENSMUST00000129137.8	ENSMUSG00000027593.16	Raly	chr2	protein_coding	hnRNP-associated with lethal yellow
chr2	154633468;154636387	154636319;154662927	+	154633468	154662927	cassetteExon	0.5	100	100	ENSMUST00000029120.14	ENSMUSG00000027593.16	Raly	chr2	protein_coding	hnRNP-associated with lethal yellow
chr2	154633151	154699189	+	154663009	154699189	A5SS&ES	0.33	50	50	ENSMUST00000029120.14	ENSMUSG00000027593.16	Raly	chr2	protein_coding	hnRNP-associated with lethal yellow
chr2	154633705	154662927	+	154633468	154662927	A5SS	0.25	50	50	ENSMUST00000029120.14	ENSMUSG00000027593.16	Raly	chr2	protein_coding	hnRNP-associated with lethal yellow
chr2	154633705	154662927	+	154636387	154662927	A5SS&ES	0.33	50	50	ENSMUST00000145202.8	ENSMUSG00000027593.16	Raly	chr2	protein_coding	hnRNP-associated with lethal yellow
chr2	154793224	154887532	+	154793224;154794511	154794466;154887532	ES	0.25	50	50	ENSMUST00000137333.8	ENSMUSG00000027596.11	a	chr2	protein_coding	nonagouti
chr2	154633468	154636319	+	154633468	154793114	A3SS	0.25	50	50	ENSMUST00000137333.8	ENSMUSG00000027596.11	a	chr2	protein_coding	nonagouti
chr2	154633468	154662927	+	154633468	154793114	A3SS	0.25	50	50	ENSMUST00000137333.8	ENSMUSG00000027596.11	a	chr2	protein_coding	nonagouti
chr2	154633468	154699189	+	154633468	154793114	A3SS	0.25	50	50	ENSMUST00000137333.8	ENSMUSG00000027596.11	a	chr2	protein_coding	nonagouti
chr2	154855549	154887532	+	154794511	154887532	A5SS	0.25	50	50	ENSMUST00000137333.8	ENSMUSG00000027596.11	a	chr2	protein_coding	nonagouti
chr2	154855561	154887532	+	154794511	154887532	A5SS	0.25	50	50	ENSMUST00000137333.8	ENSMUSG00000027596.11	a	chr2	protein_coding	nonagouti
chr2	154855549	154887532	+	154793224	154887532	A5SS	0.25	50	50	ENSMUST00000109697.8	ENSMUSG00000027596.11	a	chr2	protein_coding	nonagouti
chr2	154855561	154887532	+	154793224	154887532	A5SS	0.25	50	50	ENSMUST00000109697.8	ENSMUSG00000027596.11	a	chr2	protein_coding	nonagouti
chr2	154855561	154887532	+	154855549	154887532	A5SS	0.25	50	50	ENSMUST00000148402.8	ENSMUSG00000027596.11	a	chr2	protein_coding	nonagouti
chr2	154730280	154734029	-	154730280	154734610	A5SS	0.5	50	50	ENSMUST00000099173.11	ENSMUSG00000074656.13	Eif2s2	chr2	protein_coding	eukaryotic translation initiation factor 2, subunit 2 (beta)
chr2	154909282	154910748	-	154909318	154910748	A3SS	0.5	50	50	ENSMUST00000054607.16	ENSMUSG00000027597.16	Ahcy	chr2	protein_coding	S-adenosylhomocysteine hydrolase
chr2	154924261	154940679	+	154922072	154940679	A5SS	0.25	50	50	ENSMUST00000209837.2	ENSMUSG00000109877.2	Gm45609	chr2	lncRNA	predicted gene 45609
chr2	154938199	154940679	+	154922072	154940679	A5SS	0.25	50	50	ENSMUST00000209837.2	ENSMUSG00000109877.2	Gm45609	chr2	lncRNA	predicted gene 45609
chr2	154916216	154920548	+	154916216	154940679	A3SS	0.5	50	50	ENSMUST00000209333.2	ENSMUSG00000109877.2	Gm45609	chr2	lncRNA	predicted gene 45609
chr2	154922072	154940679	+	154916216	154940679	A5SS	0.25	50	50	ENSMUST00000209333.2	ENSMUSG00000109877.2	Gm45609	chr2	lncRNA	predicted gene 45609
chr2	154924261	154940679	+	154916216	154940679	A5SS	0.25	50	50	ENSMUST00000209333.2	ENSMUSG00000109877.2	Gm45609	chr2	lncRNA	predicted gene 45609
chr2	154938199	154940679	+	154916216	154940679	A5SS	0.25	50	50	ENSMUST00000209333.2	ENSMUSG00000109877.2	Gm45609	chr2	lncRNA	predicted gene 45609
chr2	154924261;154938199	154938124;154940679	+	154924261	154940679	cassetteExon	0.5	100	100	ENSMUST00000209399.2	ENSMUSG00000109877.2	Gm45609	chr2	lncRNA	predicted gene 45609
chr2	154924261;154938199	154938138;154940679	+	154924261	154940679	cassetteExon	0.5	100	100	ENSMUST00000209399.2	ENSMUSG00000109877.2	Gm45609	chr2	lncRNA	predicted gene 45609
chr2	154923548	154924154	+	154923394	154924154	A5SS	0.5	50	50	ENSMUST00000209399.2	ENSMUSG00000109877.2	Gm45609	chr2	lncRNA	predicted gene 45609
chr2	154924261	154938138	+	154924261	154938124	A3SS	0.33	50	50	ENSMUST00000211423.2	ENSMUSG00000109877.2	Gm45609	chr2	lncRNA	predicted gene 45609
chr2	154924261	154940679	+	154938199	154940679	5pMXE	0.25	50	50	ENSMUST00000210144.2	ENSMUSG00000109877.2	Gm45609	chr2	lncRNA	predicted gene 45609
chr2	154980192	155005313	+	154980192;154999895	154999694;155005313	ES	0.5	50	50	ENSMUST00000155360.8	ENSMUSG00000027598.17	Itch	chr2	protein_coding	itchy, E3 ubiquitin protein ligase
chr2	155044199	155044513	+	155044199	155045201	A3SS	0.5	50	50	ENSMUST00000029126.15	ENSMUSG00000027598.17	Itch	chr2	protein_coding	itchy, E3 ubiquitin protein ligase
chr2	155078537	155084651	+	155078537	155084655	A3SS	0.5	50	50	ENSMUST00000054912.15	ENSMUSG00000047459.15	Dynlrb1	chr2	protein_coding	dynein light chain roadblock-type 1
chr2	155078856	155084651	+	155078537	155084651	A5SS	0.33	50	50	ENSMUST00000109682.9	ENSMUSG00000047459.15	Dynlrb1	chr2	protein_coding	dynein light chain roadblock-type 1
chr2	155078860	155084651	+	155078537	155084651	A5SS	0.33	50	50	ENSMUST00000109682.9	ENSMUSG00000047459.15	Dynlrb1	chr2	protein_coding	dynein light chain roadblock-type 1
chr2	155078860	155084651	+	155078856	155084651	A5SS	0.33	50	50	ENSMUST00000150602.2	ENSMUSG00000047459.15	Dynlrb1	chr2	protein_coding	dynein light chain roadblock-type 1
chr2	155118566	155119018	+	155118566;155118933	155118878;155119018	ES	0.5	50	50	ENSMUST00000029128.4	ENSMUSG00000027602.10	Map1lc3a	chr2	protein_coding	microtubule-associated protein 1 light chain 3 alpha
chr2	155118566	155119018	+	155118933	155119018	5pMXE	0.5	50	50	ENSMUST00000154596.2	ENSMUSG00000027602.10	Map1lc3a	chr2	protein_coding	microtubule-associated protein 1 light chain 3 alpha
chr2	155143275	155146357	-	155143275	155156422	A5SS	0.5	50	50	ENSMUST00000077626.13	ENSMUSG00000038383.17	Pigu	chr2	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class U
chr2	155170601	155173072	-	155170601	155173069	A5SS	0.5	50	50	ENSMUST00000077626.13	ENSMUSG00000038383.17	Pigu	chr2	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class U
chr2	155227384	155227921	+	155227384	155227801	A3SS	0.5	50	50	ENSMUST00000151466.8	ENSMUSG00000038375.16	Trp53inp2	chr2	protein_coding	transformation related protein 53 inducible nuclear protein 2
chr2	155223937	155227210	+	155223112	155227210	A5SS	0.33	50	50	ENSMUST00000151466.8	ENSMUSG00000038375.16	Trp53inp2	chr2	protein_coding	transformation related protein 53 inducible nuclear protein 2
chr2	155224849	155227210	+	155223112	155227210	A5SS	0.33	50	50	ENSMUST00000151466.8	ENSMUSG00000038375.16	Trp53inp2	chr2	protein_coding	transformation related protein 53 inducible nuclear protein 2
chr2	155224849	155227210	+	155223937	155227210	A5SS	0.33	50	50	ENSMUST00000043237.14	ENSMUSG00000038375.16	Trp53inp2	chr2	protein_coding	transformation related protein 53 inducible nuclear protein 2
chr2	155280059	155315560	-	155280059	155282608	5pMXE	0.5	50	50	ENSMUST00000043126.12	ENSMUSG00000038369.15	Ncoa6	chr2	protein_coding	nuclear receptor coactivator 6
chr2	155257848;155260438	155260359;155260798	-	155257848	155260798	cassetteExon	0.5	100	100	ENSMUST00000043126.12	ENSMUSG00000038369.15	Ncoa6	chr2	protein_coding	nuclear receptor coactivator 6
chr2	155282705	155315560	-	155282705;155291271	155291203;155315560	ES	0.33	50	50	ENSMUST00000109670.8	ENSMUSG00000038369.15	Ncoa6	chr2	protein_coding	nuclear receptor coactivator 6
chr2	155280059;155282705	155282608;155315560	-	155280059	155315560	cassetteExon	0.5	100	100	ENSMUST00000123293.8	ENSMUSG00000038369.15	Ncoa6	chr2	protein_coding	nuclear receptor coactivator 6
chr2	155291271	155315560	-	155280059	155315560	A3SS	0.33	50	50	ENSMUST00000123293.8	ENSMUSG00000038369.15	Ncoa6	chr2	protein_coding	nuclear receptor coactivator 6
chr2	155348481	155348859	-	155348481	155356549	A5SS	0.5	50	50	ENSMUST00000029131.11	ENSMUSG00000027603.16	Ggt7	chr2	protein_coding	gamma-glutamyltransferase 7
chr2	155397911	155398698	+	155397911;155398423	155398253;155398698	ES	0.5	50	50	ENSMUST00000029135.15	ENSMUSG00000027605.19	Acss2	chr2	protein_coding	acyl-CoA synthetase short-chain family member 2
chr2	155403740	155415083	+	155403740	155403873	3pMXE	0.5	50	50	ENSMUST00000029135.15	ENSMUSG00000027605.19	Acss2	chr2	protein_coding	acyl-CoA synthetase short-chain family member 2
chr2	155392389;155393148	155393110;155397774	+	155392389	155397774	cassetteExon	0.5	100	100	ENSMUST00000029135.15	ENSMUSG00000027605.19	Acss2	chr2	protein_coding	acyl-CoA synthetase short-chain family member 2
chr2	155416609	155418729	+	155416609	155426970	A3SS	0.5	50	50	ENSMUST00000065973.9	ENSMUSG00000027605.19	Acss2	chr2	protein_coding	acyl-CoA synthetase short-chain family member 2
chr2	155364096	155397774	+	155364096	155391111	3pMXE	0.5	50	50	ENSMUST00000131054.2	ENSMUSG00000027605.19	Acss2	chr2	protein_coding	acyl-CoA synthetase short-chain family member 2
chr2	155392389	155397774	+	155364096	155397774	A5SS	0.33	50	50	ENSMUST00000133654.3	ENSMUSG00000027605.19	Acss2	chr2	protein_coding	acyl-CoA synthetase short-chain family member 2
chr2	155393148	155397774	+	155364096	155397774	A5SS	0.33	50	50	ENSMUST00000133654.3	ENSMUSG00000027605.19	Acss2	chr2	protein_coding	acyl-CoA synthetase short-chain family member 2
chr2	155423953	155434614	-	155423953;155429496	155429362;155434614	ES	0.5	50	50	ENSMUST00000079691.13	ENSMUSG00000027610.18	Gss	chr2	protein_coding	glutathione synthetase
chr2	155418891	155419442	-	155415095	155419442	A3SS	0.5	50	50	ENSMUST00000079691.13	ENSMUSG00000027610.18	Gss	chr2	protein_coding	glutathione synthetase
chr2	155408804	155409703	-	155408804	155409613	A5SS	0.5	50	50	ENSMUST00000079691.13	ENSMUSG00000027610.18	Gss	chr2	protein_coding	glutathione synthetase
chr2	155423953	155424219	-	155423953	155429362	A5SS	0.25	50	50	ENSMUST00000079691.13	ENSMUSG00000027610.18	Gss	chr2	protein_coding	glutathione synthetase
chr2	155423953	155424403	-	155423953	155429362	A5SS	0.25	50	50	ENSMUST00000079691.13	ENSMUSG00000027610.18	Gss	chr2	protein_coding	glutathione synthetase
chr2	155429496	155433937	-	155429496	155434614	A5SS	0.5	50	50	ENSMUST00000079691.13	ENSMUSG00000027610.18	Gss	chr2	protein_coding	glutathione synthetase
chr2	155423953	155424219	-	155423953	155434614	A5SS	0.25	50	50	ENSMUST00000130881.8	ENSMUSG00000027610.18	Gss	chr2	protein_coding	glutathione synthetase
chr2	155423953	155424403	-	155423953	155434614	A5SS	0.25	50	50	ENSMUST00000130881.8	ENSMUSG00000027610.18	Gss	chr2	protein_coding	glutathione synthetase
chr2	155423953	155424219	-	155423953	155424403	A5SS	0.25	50	50	ENSMUST00000126322.8	ENSMUSG00000027610.18	Gss	chr2	protein_coding	glutathione synthetase
chr2	155423953	155434614	-	155423953	155429362	5pMXE	0.25	50	50	ENSMUST00000157008.8	ENSMUSG00000027610.18	Gss	chr2	protein_coding	glutathione synthetase
chr2	155486979	155495413	-	155486979;155492505	155492339;155495413	ES	0.33	50	50	ENSMUST00000041059.12	ENSMUSG00000038324.14	Trpc4ap	chr2	protein_coding	transient receptor potential cation channel, subfamily C, member 4 associated protein
chr2	155485388	155486848	-	155485370	155486848	A3SS	0.5	50	50	ENSMUST00000041059.12	ENSMUSG00000038324.14	Trpc4ap	chr2	protein_coding	transient receptor potential cation channel, subfamily C, member 4 associated protein
chr2	155492481	155495413	-	155492505	155495413	A3SS	0.33	50	50	ENSMUST00000041059.12	ENSMUSG00000038324.14	Trpc4ap	chr2	protein_coding	transient receptor potential cation channel, subfamily C, member 4 associated protein
chr2	155515038	155533751	-	155515038	155534059	A5SS	0.5	50	50	ENSMUST00000041059.12	ENSMUSG00000038324.14	Trpc4ap	chr2	protein_coding	transient receptor potential cation channel, subfamily C, member 4 associated protein
chr2	155486979	155495413	-	155486979;155492481	155492339;155495413	ES	0.33	50	50	ENSMUST00000103140.5	ENSMUSG00000038324.14	Trpc4ap	chr2	protein_coding	transient receptor potential cation channel, subfamily C, member 4 associated protein
chr2	155552888	155554632	-	155552888	155555258	A5SS	0.33	50	50	ENSMUST00000040833.5	ENSMUSG00000038312.11	Edem2	chr2	protein_coding	ER degradation enhancer, mannosidase alpha-like 2
chr2	155552888	155555245	-	155552888	155555258	A5SS	0.33	50	50	ENSMUST00000040833.5	ENSMUSG00000038312.11	Edem2	chr2	protein_coding	ER degradation enhancer, mannosidase alpha-like 2
chr2	155552888	155555245	-	155552888	155554632	5pMXE	0.33	50	50	ENSMUST00000148571.8	ENSMUSG00000038312.11	Edem2	chr2	protein_coding	ER degradation enhancer, mannosidase alpha-like 2
chr2	155593079	155593268	+	155593079	155593265	A3SS	0.5	50	50	ENSMUST00000132608.2	ENSMUSG00000027611.13	Procr	chr2	protein_coding	protein C receptor, endothelial
chr2	155665288	155668045	-	155665288;155665960	155665785;155668045	ES	0.5	50	50	ENSMUST00000029142.15	ENSMUSG00000027613.16	Eif6	chr2	protein_coding	eukaryotic translation initiation factor 6
chr2	155662031	155664274	-	155662031	155664757	A5SS	0.5	50	50	ENSMUST00000029142.15	ENSMUSG00000027613.16	Eif6	chr2	protein_coding	eukaryotic translation initiation factor 6
chr2	155668130	155668566	-	155668130	155668247	A5SS	0.5	50	50	ENSMUST00000029142.15	ENSMUSG00000027613.16	Eif6	chr2	protein_coding	eukaryotic translation initiation factor 6
chr2	155665288;155668130	155668045;155668247	-	155665288	155668247	cassetteExon	0.5	100	100	ENSMUST00000154841.8	ENSMUSG00000027613.16	Eif6	chr2	protein_coding	eukaryotic translation initiation factor 6
chr2	155665288	155665785	-	155665288	155668247	A5SS	0.33	50	50	ENSMUST00000154841.8	ENSMUSG00000027613.16	Eif6	chr2	protein_coding	eukaryotic translation initiation factor 6
chr2	155665288	155668247	-	155665288	155668045	A5SS	0.33	50	50	ENSMUST00000138962.8	ENSMUSG00000027613.16	Eif6	chr2	protein_coding	eukaryotic translation initiation factor 6
chr2	155665288	155668045	-	155665960	155668045	3pMXE	0.5	50	50	ENSMUST00000134278.2	ENSMUSG00000027613.16	Eif6	chr2	protein_coding	eukaryotic translation initiation factor 6
chr2	155665288	155668247	-	155668130	155668247	3pMXE	0.5	50	50	ENSMUST00000109638.2	ENSMUSG00000027613.16	Eif6	chr2	protein_coding	eukaryotic translation initiation factor 6
chr2	155693392	155729029	-	155693392;155700109	155700032;155729029	ES	0.33	50	50	ENSMUST00000136933.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155743275	155752277	-	155743275;155751345	155751273;155752277	ES	0.33	50	50	ENSMUST00000136933.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155763647	155772093	-	155763647	155771933	5pMXE	0.33	50	50	ENSMUST00000136933.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155763647;155766464	155766378;155771933	-	155763647	155771933	cassetteExon	0.5	100	100	ENSMUST00000136933.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155712732	155729029	-	155700109	155729029	A3SS	0.33	50	50	ENSMUST00000136933.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155752384	155753661	-	155752387	155753661	A3SS	0.5	50	50	ENSMUST00000136933.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155752384	155763555	-	155753756	155763555	A3SS&ES	0.25	50	50	ENSMUST00000136933.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155763645	155771933	-	155763647	155771933	A3SS	0.25	50	50	ENSMUST00000136933.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155693392	155693590	-	155693392	155700032	A5SS	0.33	50	50	ENSMUST00000136933.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155743275	155752285	-	155743275	155751273	A5SS&ES	0.25	50	50	ENSMUST00000136933.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155693392;155729137	155729029;155771933	-	155693392;155763645	155700032;155771933	MXE	0.5	100	100	ENSMUST00000152818.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155743275	155763555	-	155753756	155763555	A3SS&ES	0.25	50	50	ENSMUST00000152818.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155751345	155763555	-	155753756	155763555	A3SS&ES	0.25	50	50	ENSMUST00000152818.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155766464	155771933	-	155763645	155771933	A3SS	0.25	50	50	ENSMUST00000152818.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155743275;155751345	155751273;155763555	-	155743275	155763555	cassetteExon	0.5	100	100	ENSMUST00000151078.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155700109;155752384	155752277;155763555	-	155700109;155743275	155729029;155763555	MXE	0.5	100	100	ENSMUST00000151078.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155743275;155752384	155752277;155763555	-	155743275	155763555	cassetteExon	0.5	100	100	ENSMUST00000151078.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155743275;155752384	155752285;155763555	-	155743275	155763555	cassetteExon	0.5	100	100	ENSMUST00000151078.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155752384	155763555	-	155752384;155753756	155753661;155763555	ES	0.25	50	50	ENSMUST00000109632.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155693392;155700109	155700032;155752277	-	155693392;155751345	155729029;155752277	MXE	0.5	100	100	ENSMUST00000109632.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155712732	155729029	-	155693392	155729029	A3SS	0.33	50	50	ENSMUST00000109632.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155693392	155693590	-	155693392	155729029	A5SS	0.33	50	50	ENSMUST00000109632.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155743275;155751345	155751273;155763555	-	155743275;155753756	155752285;155763555	MXE	0.5	100	100	ENSMUST00000152766.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155700109	155752277	-	155700109	155729029	A5SS&ES	0.5	50	50	ENSMUST00000152766.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155743275	155752277	-	155743275	155752285	A5SS	0.25	50	50	ENSMUST00000152766.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155693392;155729137	155729029;155771933	-	155693392;155763647	155700032;155771933	MXE	0.5	100	100	ENSMUST00000006036.13	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155700109;155729137	155729029;155771933	-	155700109;155763647	155752277;155771933	MXE	0.5	100	100	ENSMUST00000006036.13	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155743275	155752277	-	155700109	155752277	A3SS	0.33	50	50	ENSMUST00000006036.13	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155751345	155752277	-	155700109	155752277	A3SS	0.33	50	50	ENSMUST00000006036.13	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155700109;155752384	155752277;155763555	-	155700109;155751345	155729029;155763555	MXE	0.5	100	100	ENSMUST00000109631.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155743275;155752384	155752277;155763555	-	155743275;155751345	155751273;155763555	MXE	0.5	100	100	ENSMUST00000109631.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155743275;155752384	155752285;155763555	-	155743275;155751345	155751273;155763555	MXE	0.5	100	100	ENSMUST00000109631.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155751345;155752384	155752277;155763555	-	155751345	155763555	cassetteExon	0.5	100	100	ENSMUST00000109631.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155743275;155751345	155751273;155763555	-	155743275;155753756	155752277;155763555	MXE	0.5	100	100	ENSMUST00000133726.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155693392	155729029	-	155700109	155729029	3pMXE	0.33	50	50	ENSMUST00000141501.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155763645	155771933	-	155729137	155771933	A3SS	0.25	50	50	ENSMUST00000159238.2	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155763647	155771933	-	155729137	155771933	A3SS	0.25	50	50	ENSMUST00000159238.2	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155766464	155771933	-	155729137	155771933	A3SS	0.25	50	50	ENSMUST00000159238.2	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155729137	155743218	-	155729137	155771933	A5SS	0.5	50	50	ENSMUST00000159238.2	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155751345	155763555	-	155751345	155752277	5pMXE	0.5	50	50	ENSMUST00000162258.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155763647	155766378	-	155763647	155772093	A5SS	0.33	50	50	ENSMUST00000162749.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155743275	155752277	-	155751345	155752277	3pMXE	0.33	50	50	ENSMUST00000155680.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155751345	155763555	-	155751345;155753756	155752277;155763555	ES	0.33	50	50	ENSMUST00000155680.8	ENSMUSG00000005882.19	Uqcc1	chr2	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 1
chr2	155809574	155810678	+	155809574	155810675	A3SS	0.5	50	50	ENSMUST00000149905.8	ENSMUSG00000038241.17	Cep250	chr2	protein_coding	centrosomal protein 250
chr2	155815409	155816173	+	155815409	155816170	A3SS	0.5	50	50	ENSMUST00000149905.8	ENSMUSG00000038241.17	Cep250	chr2	protein_coding	centrosomal protein 250
chr2	155798577	155803792	+	155798582	155803792	A5SS	0.5	50	50	ENSMUST00000149905.8	ENSMUSG00000038241.17	Cep250	chr2	protein_coding	centrosomal protein 250
chr2	155829036	155831419	+	155829036;155830352	155830232;155831419	ES	0.33	50	50	ENSMUST00000109619.9	ENSMUSG00000038241.17	Cep250	chr2	protein_coding	centrosomal protein 250
chr2	155830352;155830497	155830453;155831419	+	155830352	155831419	cassetteExon	0.5	100	100	ENSMUST00000109619.9	ENSMUSG00000038241.17	Cep250	chr2	protein_coding	centrosomal protein 250
chr2	155829036	155831419	+	155829036	155830232	A3SS	0.5	50	50	ENSMUST00000148191.2	ENSMUSG00000038241.17	Cep250	chr2	protein_coding	centrosomal protein 250
chr2	155829036;155830497	155830232;155831419	+	155829036	155831419	cassetteExon	0.5	100	100	ENSMUST00000128683.2	ENSMUSG00000038241.17	Cep250	chr2	protein_coding	centrosomal protein 250
chr2	155845405;155845768	155845601;155849800	-	155845405	155849800	cassetteExon	0.5	100	100	ENSMUST00000124812.8	ENSMUSG00000074646.11	6430550D23Rik	chr2	protein_coding	RIKEN cDNA 6430550D23 gene
chr2	155845405;155845905	155845601;155849800	-	155845405	155849800	cassetteExon	0.5	100	100	ENSMUST00000124812.8	ENSMUSG00000074646.11	6430550D23Rik	chr2	protein_coding	RIKEN cDNA 6430550D23 gene
chr2	155843482	155844357	-	155836783	155844357	A3SS	0.5	50	50	ENSMUST00000124812.8	ENSMUSG00000074646.11	6430550D23Rik	chr2	protein_coding	RIKEN cDNA 6430550D23 gene
chr2	155844406	155845021	-	155844479	155845021	A3SS	0.5	50	50	ENSMUST00000124812.8	ENSMUSG00000074646.11	6430550D23Rik	chr2	protein_coding	RIKEN cDNA 6430550D23 gene
chr2	155845905	155849800	-	155845905	155846261	5pMXE	0.33	50	50	ENSMUST00000109617.9	ENSMUSG00000074646.11	6430550D23Rik	chr2	protein_coding	RIKEN cDNA 6430550D23 gene
chr2	155845905	155846032	-	155845905	155846261	A5SS	0.33	50	50	ENSMUST00000109617.9	ENSMUSG00000074646.11	6430550D23Rik	chr2	protein_coding	RIKEN cDNA 6430550D23 gene
chr2	155845905	155849800	-	155845768	155849800	A3SS	0.33	50	50	ENSMUST00000144686.8	ENSMUSG00000074646.11	6430550D23Rik	chr2	protein_coding	RIKEN cDNA 6430550D23 gene
chr2	155845905	155846032	-	155845905	155849800	A5SS	0.33	50	50	ENSMUST00000140657.8	ENSMUSG00000074646.11	6430550D23Rik	chr2	protein_coding	RIKEN cDNA 6430550D23 gene
chr2	155845905	155846032	-	155845744	155846032	A3SS	0.5	50	50	ENSMUST00000156993.8	ENSMUSG00000074646.11	6430550D23Rik	chr2	protein_coding	RIKEN cDNA 6430550D23 gene
chr2	155853326;155857311	155857297;155857909	+	155853326	155857909	cassetteExon	0.5	100	100	ENSMUST00000006035.13	ENSMUSG00000005881.14	Ergic3	chr2	protein_coding	ERGIC and golgi 3
chr2	155857940	155858608	+	155857940	155858626	A3SS	0.5	50	50	ENSMUST00000006035.13	ENSMUSG00000005881.14	Ergic3	chr2	protein_coding	ERGIC and golgi 3
chr2	155859772	155859955	+	155859772	155859991	A3SS	0.5	50	50	ENSMUST00000006035.13	ENSMUSG00000005881.14	Ergic3	chr2	protein_coding	ERGIC and golgi 3
chr2	155858456	155858626	+	155857940	155858626	A5SS	0.5	50	50	ENSMUST00000006035.13	ENSMUSG00000005881.14	Ergic3	chr2	protein_coding	ERGIC and golgi 3
chr2	155859297	155859500	+	155858873	155859500	A5SS	0.5	50	50	ENSMUST00000006035.13	ENSMUSG00000005881.14	Ergic3	chr2	protein_coding	ERGIC and golgi 3
chr2	155871967	155873319	-	155871967;155873232	155873104;155873319	ES	0.5	50	50	ENSMUST00000109611.8	ENSMUSG00000013338.17	Fer1l4	chr2	protein_coding	fer-1-like 4 (C. elegans)
chr2	155877212	155877800	-	155877212;155877528	155877355;155877800	ES	0.5	50	50	ENSMUST00000109611.8	ENSMUSG00000013338.17	Fer1l4	chr2	protein_coding	fer-1-like 4 (C. elegans)
chr2	155877934	155878521	-	155877934;155878403	155878279;155878521	ES	0.5	50	50	ENSMUST00000109611.8	ENSMUSG00000013338.17	Fer1l4	chr2	protein_coding	fer-1-like 4 (C. elegans)
chr2	155908786	155909232	+	155908786;155909052	155909009;155909232	ES	0.5	50	50	ENSMUST00000133511.8	ENSMUSG00000038180.12	Spag4	chr2	protein_coding	sperm associated antigen 4
chr2	155909257	155909667	+	155909257;155909483	155909375;155909667	ES	0.5	50	50	ENSMUST00000133511.8	ENSMUSG00000038180.12	Spag4	chr2	protein_coding	sperm associated antigen 4
chr2	155907591	155908054	+	155907572	155908054	A5SS	0.33	50	50	ENSMUST00000133511.8	ENSMUSG00000038180.12	Spag4	chr2	protein_coding	sperm associated antigen 4
chr2	155907805	155908054	+	155907572	155908054	A5SS	0.33	50	50	ENSMUST00000133511.8	ENSMUSG00000038180.12	Spag4	chr2	protein_coding	sperm associated antigen 4
chr2	155908786	155909232	+	155908786	155909009	A3SS	0.5	50	50	ENSMUST00000125996.8	ENSMUSG00000038180.12	Spag4	chr2	protein_coding	sperm associated antigen 4
chr2	155909257	155909667	+	155909483	155909667	A5SS	0.5	50	50	ENSMUST00000125996.8	ENSMUSG00000038180.12	Spag4	chr2	protein_coding	sperm associated antigen 4
chr2	155908158	155908725	+	155908158;155908553	155908487;155908725	ES	0.33	50	50	ENSMUST00000136765.8	ENSMUSG00000038180.12	Spag4	chr2	protein_coding	sperm associated antigen 4
chr2	155908117	155908725	+	155908553	155908725	A5SS&ES	0.33	50	50	ENSMUST00000136765.8	ENSMUSG00000038180.12	Spag4	chr2	protein_coding	sperm associated antigen 4
chr2	155907805	155908054	+	155907591	155908054	A5SS	0.33	50	50	ENSMUST00000038860.12	ENSMUSG00000038180.12	Spag4	chr2	protein_coding	sperm associated antigen 4
chr2	155908117	155908725	+	155908158	155908725	A5SS	0.33	50	50	ENSMUST00000138178.8	ENSMUSG00000038180.12	Spag4	chr2	protein_coding	sperm associated antigen 4
chr2	155909257	155909667	+	155909257	155909375	3pMXE	0.5	50	50	ENSMUST00000131144.8	ENSMUSG00000038180.12	Spag4	chr2	protein_coding	sperm associated antigen 4
chr2	155921384	155953706	-	155921384;155945349	155945269;155953706	ES	0.33	50	50	ENSMUST00000184265.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155945349	155967201	-	155945349	155953706	5pMXE	0.25	50	50	ENSMUST00000184265.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921162;155940292	155940150;155945269	-	155921162;155921384	155921259;155945269	MXE	0.5	100	100	ENSMUST00000184265.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384;155940292	155940105;155945269	-	155921384	155945269	cassetteExon	0.5	100	100	ENSMUST00000184265.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384;155940292	155940150;155945269	-	155921384	155945269	cassetteExon	0.5	100	100	ENSMUST00000184265.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155920574	155920820	-	155920743	155920820	A3SS&ES	0.5	50	50	ENSMUST00000184265.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155945317	155953706	-	155945349	155953706	A3SS	0.33	50	50	ENSMUST00000184265.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384	155938338	-	155921384	155945269	A5SS	0.11	50	50	ENSMUST00000184265.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384	155938746	-	155921384	155945269	A5SS	0.11	50	50	ENSMUST00000184265.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384	155944374	-	155921384	155945269	A5SS	0.11	50	50	ENSMUST00000184265.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384	155953748	-	155921384	155945269	A5SS&ES	0.11	50	50	ENSMUST00000184265.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384	155953826	-	155921384	155945269	A5SS&ES	0.11	50	50	ENSMUST00000184265.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155945349	155953748	-	155945349	155953706	A5SS	0.25	50	50	ENSMUST00000184265.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155945349	155953826	-	155945349	155953706	A5SS	0.25	50	50	ENSMUST00000184265.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384	155953826	-	155921384	155953706	5pMXE	0.11	50	50	ENSMUST00000142975.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384;155945317	155945269;155953706	-	155921384	155953706	cassetteExon	0.5	100	100	ENSMUST00000142975.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155915912	155916096	-	155915955	155916096	A3SS	0.33	50	50	ENSMUST00000142975.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155915978	155916096	-	155915955	155916096	A3SS	0.33	50	50	ENSMUST00000142975.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155916285	155919319	-	155918208	155919319	A3SS&ES	0.5	50	50	ENSMUST00000142975.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155915581	155915715	-	155915581	155915719	A5SS	0.33	50	50	ENSMUST00000142975.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155915581	155915887	-	155915581	155915719	A5SS	0.33	50	50	ENSMUST00000142975.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155920574	155920820	-	155920574	155920672	A5SS	0.5	50	50	ENSMUST00000142975.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921162	155940150	-	155921162	155921259	A5SS&ES	0.5	50	50	ENSMUST00000142975.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384	155938338	-	155921384	155953706	A5SS	0.11	50	50	ENSMUST00000142975.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384	155938746	-	155921384	155953706	A5SS	0.11	50	50	ENSMUST00000142975.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384	155940105	-	155921384	155953706	A5SS	0.11	50	50	ENSMUST00000142975.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384	155940150	-	155921384	155953706	A5SS	0.11	50	50	ENSMUST00000142975.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384	155944374	-	155921384	155953706	A5SS	0.11	50	50	ENSMUST00000142975.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384	155953748	-	155921384	155953706	A5SS	0.11	50	50	ENSMUST00000142975.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155920574	155920820	-	155920574;155920743	155920672;155920820	ES	0.5	50	50	ENSMUST00000109607.10	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155945317	155953826	-	155945317	155953706	A5SS	0.5	50	50	ENSMUST00000109608.9	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155915912	155916096	-	155915978	155916096	A3SS	0.33	50	50	ENSMUST00000126513.2	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155915581	155915715	-	155915581	155915887	A5SS	0.33	50	50	ENSMUST00000126513.2	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384	155953826	-	155921384	155953748	5pMXE	0.11	50	50	ENSMUST00000079312.10	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921162;155940292	155940150;155953748	-	155921162;155921384	155921259;155953748	MXE	0.5	100	100	ENSMUST00000079312.10	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384;155940292	155940105;155953748	-	155921384	155953748	cassetteExon	0.5	100	100	ENSMUST00000079312.10	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384;155940292	155940150;155953748	-	155921384	155953748	cassetteExon	0.5	100	100	ENSMUST00000079312.10	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384;155945349	155945269;155953748	-	155921384	155953748	cassetteExon	0.5	100	100	ENSMUST00000079312.10	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384	155938338	-	155921384	155953748	A5SS	0.11	50	50	ENSMUST00000079312.10	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384	155938746	-	155921384	155953748	A5SS	0.11	50	50	ENSMUST00000079312.10	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384	155944374	-	155921384	155953748	A5SS	0.11	50	50	ENSMUST00000079312.10	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384;155945317	155945269;155953826	-	155921384	155953826	cassetteExon	0.5	100	100	ENSMUST00000142960.9	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384;155945349	155945269;155953826	-	155921384	155953826	cassetteExon	0.5	100	100	ENSMUST00000142960.9	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384	155938338	-	155921384	155953826	A5SS	0.11	50	50	ENSMUST00000142960.9	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384	155938746	-	155921384	155953826	A5SS	0.11	50	50	ENSMUST00000142960.9	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384	155940105	-	155921384	155953826	A5SS	0.11	50	50	ENSMUST00000142960.9	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384	155940150	-	155921384	155953826	A5SS	0.11	50	50	ENSMUST00000142960.9	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384	155944374	-	155921384	155953826	A5SS	0.11	50	50	ENSMUST00000142960.9	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921162	155940150	-	155921162;155921384	155921259;155940150	ES	0.5	50	50	ENSMUST00000133921.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384;155945349	155945269;155953748	-	155921384;155940292	155940150;155953748	MXE	0.5	100	100	ENSMUST00000133921.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155940292;155945349	155945269;155953748	-	155940292	155953748	cassetteExon	0.5	100	100	ENSMUST00000133921.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384	155938338	-	155921384	155940150	A5SS	0.11	50	50	ENSMUST00000133921.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384	155938746	-	155921384	155940150	A5SS	0.11	50	50	ENSMUST00000133921.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384	155940105	-	155921384	155940150	A5SS	0.11	50	50	ENSMUST00000133921.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384	155944374	-	155921384	155940150	A5SS&ES	0.11	50	50	ENSMUST00000133921.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155945349	155953826	-	155945349	155953748	5pMXE	0.25	50	50	ENSMUST00000154889.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155945349	155967201	-	155945349	155953748	5pMXE	0.25	50	50	ENSMUST00000154889.8	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384	155938338	-	155921384	155944374	A5SS	0.11	50	50	ENSMUST00000184152.2	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384	155938746	-	155921384	155944374	A5SS	0.11	50	50	ENSMUST00000184152.2	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384	155940105	-	155921384	155944374	A5SS	0.11	50	50	ENSMUST00000184152.2	ENSMUSG00000074643.13	Cpne1	chr2	protein_coding	copine I
chr2	155921384	155940105	-	155921384	155938338	5pMXE	0.11	50	50	ENSMUST00000127956.9	ENSMUSG00000098950.8	Gm28036	chr2	protein_coding	predicted gene, 28036
chr2	155921384	155938746	-	155921384	155938338	A5SS	0.11	50	50	ENSMUST00000127956.9	ENSMUSG00000098950.8	Gm28036	chr2	protein_coding	predicted gene, 28036
chr2	155921384	155945269	-	155921384;155940292	155938338;155945269	ES	0.5	50	50	ENSMUST00000132494.8	ENSMUSG00000098950.8	Gm28036	chr2	protein_coding	predicted gene, 28036
chr2	155940292	155953748	-	155940292	155945269	A5SS&ES	0.5	50	50	ENSMUST00000132494.8	ENSMUSG00000098950.8	Gm28036	chr2	protein_coding	predicted gene, 28036
chr2	155966247	155967201	-	155945349	155967201	A3SS	0.5	50	50	ENSMUST00000162612.8	ENSMUSG00000098950.8	Gm28036	chr2	protein_coding	predicted gene, 28036
chr2	155968254	155968931	-	155968322	155968931	A3SS	0.5	50	50	ENSMUST00000162612.8	ENSMUSG00000098950.8	Gm28036	chr2	protein_coding	predicted gene, 28036
chr2	155945349	155953826	-	155945349	155967201	A5SS	0.25	50	50	ENSMUST00000162612.8	ENSMUSG00000098950.8	Gm28036	chr2	protein_coding	predicted gene, 28036
chr2	155921384	155953748	-	155921384	155940150	A5SS&ES	0.11	50	50	ENSMUST00000159952.8	ENSMUSG00000098950.8	Gm28036	chr2	protein_coding	predicted gene, 28036
chr2	155921384	155938746	-	155921384	155940105	A5SS	0.11	50	50	ENSMUST00000184899.8	ENSMUSG00000098950.8	Gm28036	chr2	protein_coding	predicted gene, 28036
chr2	155921384	155953748	-	155921384	155940105	A5SS&ES	0.11	50	50	ENSMUST00000184899.8	ENSMUSG00000098950.8	Gm28036	chr2	protein_coding	predicted gene, 28036
chr2	155921162	155940150	-	155921384	155940150	3pMXE	0.5	50	50	ENSMUST00000183518.2	ENSMUSG00000098950.8	Gm28036	chr2	protein_coding	predicted gene, 28036
chr2	155921384	155945269	-	155940292	155945269	3pMXE	0.5	50	50	ENSMUST00000059647.12	ENSMUSG00000089824.11	Rbm12	chr2	protein_coding	RNA binding motif protein 12
chr2	155945349	155953826	-	155945317	155953826	A3SS	0.5	50	50	ENSMUST00000128499.2	ENSMUSG00000089824.11	Rbm12	chr2	protein_coding	RNA binding motif protein 12
chr2	155986200	155986365	+	155986200	155986379	A3SS	0.5	50	50	ENSMUST00000088610.11	ENSMUSG00000067847.14	Romo1	chr2	protein_coding	reactive oxygen species modulator 1
chr2	155986205	155986379	+	155986200	155986379	A5SS	0.5	50	50	ENSMUST00000088610.11	ENSMUSG00000067847.14	Romo1	chr2	protein_coding	reactive oxygen species modulator 1
chr2	156001161	156003748	-	156001161;156003553	156003488;156003748	ES	0.5	50	50	ENSMUST00000109587.9	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156009511	156014748	-	156009511;156009670	156009605;156014748	ES	0.25	50	50	ENSMUST00000109587.9	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	155992736;155994433	155994383;155996159	-	155992736	155996159	cassetteExon	0.5	100	100	ENSMUST00000109587.9	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156009670;156010087	156009849;156014748	-	156009670	156014748	cassetteExon	0.5	100	100	ENSMUST00000109587.9	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156014942;156016088	156016017;156019256	-	156014942	156019256	cassetteExon	0.5	100	100	ENSMUST00000109587.9	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156014942;156018377	156018323;156019256	-	156014942	156019256	cassetteExon	0.5	100	100	ENSMUST00000109587.9	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156019305;156019826	156019553;156021097	-	156019305	156021097	cassetteExon	0.5	100	100	ENSMUST00000109587.9	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156019305;156019826	156019672;156021097	-	156019305	156021097	cassetteExon	0.5	100	100	ENSMUST00000109587.9	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156019305;156020872	156020800;156021097	-	156019305	156021097	cassetteExon	0.5	100	100	ENSMUST00000109587.9	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	155996191	156000320	-	155996209	156000320	A3SS	0.5	50	50	ENSMUST00000109587.9	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156009508	156009605	-	156009511	156009605	A3SS	0.5	50	50	ENSMUST00000109587.9	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156012401	156014748	-	156009670	156014748	A3SS	0.25	50	50	ENSMUST00000109587.9	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156016894	156019256	-	156014942	156019256	A3SS	0.25	50	50	ENSMUST00000109587.9	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156009670	156010913	-	156009670	156014748	A5SS	0.33	50	50	ENSMUST00000109587.9	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156021160	156021354	-	156021160	156021807	A5SS	0.5	50	50	ENSMUST00000109587.9	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156019305;156019826	156019553;156020800	-	156019305	156020800	cassetteExon	0.5	100	100	ENSMUST00000155837.8	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156019305;156019826	156019672;156020800	-	156019305	156020800	cassetteExon	0.5	100	100	ENSMUST00000155837.8	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156019305;156019826	156019553;156021097	-	156019305;156020872	156020800;156021097	MXE	0.5	100	100	ENSMUST00000155837.8	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156019305;156019826	156019672;156021097	-	156019305;156020872	156020800;156021097	MXE	0.5	100	100	ENSMUST00000155837.8	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156014942;156018377	156018323;156019256	-	156014942;156016088	156016017;156019256	MXE	0.5	100	100	ENSMUST00000153514.8	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156016088;156018377	156018323;156019256	-	156016088	156019256	cassetteExon	0.5	100	100	ENSMUST00000153514.8	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156016894	156019256	-	156016088	156019256	A3SS	0.25	50	50	ENSMUST00000153514.8	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156009511	156014748	-	156009670	156014748	A3SS&ES	0.25	50	50	ENSMUST00000126992.8	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156009670	156009849	-	156009670	156010913	A5SS	0.33	50	50	ENSMUST00000131625.8	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156009511	156014748	-	156009511	156009605	5pMXE	0.5	50	50	ENSMUST00000130516.8	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156009511;156010087	156009605;156014748	-	156009511	156014748	cassetteExon	0.5	100	100	ENSMUST00000146288.8	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156012401	156014748	-	156009511	156014748	A3SS	0.25	50	50	ENSMUST00000146288.8	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156012401	156014748	-	156010087	156014748	A3SS	0.25	50	50	ENSMUST00000150272.8	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156014942;156016088	156016017;156018323	-	156014942	156018323	cassetteExon	0.5	100	100	ENSMUST00000146549.8	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156016894	156019256	-	156018377	156019256	A3SS&ES	0.25	50	50	ENSMUST00000146549.8	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156019826;156020872	156020800;156021097	-	156019826	156021097	cassetteExon	0.5	100	100	ENSMUST00000154677.8	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156019305	156019553	-	156019305	156019672	A5SS	0.25	50	50	ENSMUST00000154677.8	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156019305	156021097	-	156020872	156021097	3pMXE	0.33	50	50	ENSMUST00000137340.2	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156019826	156021097	-	156020872	156021097	3pMXE	0.33	50	50	ENSMUST00000137340.2	ENSMUSG00000027620.17	Rbm39	chr2	protein_coding	RNA binding motif protein 39
chr2	156038717	156065255	+	156038466	156065255	A5SS	0.5	50	50	ENSMUST00000145731.8	ENSMUSG00000038116.17	Phf20	chr2	protein_coding	PHD finger protein 20
chr2	156038717	156093696	+	156065369	156093696	A5SS&ES	0.5	50	50	ENSMUST00000145731.8	ENSMUSG00000038116.17	Phf20	chr2	protein_coding	PHD finger protein 20
chr2	156038717	156093696	+	156038717;156065369	156065255;156093696	ES	0.5	50	50	ENSMUST00000037401.10	ENSMUSG00000038116.17	Phf20	chr2	protein_coding	PHD finger protein 20
chr2	156136195	156138576	+	156136195	156138569	A3SS	0.5	50	50	ENSMUST00000037401.10	ENSMUSG00000038116.17	Phf20	chr2	protein_coding	PHD finger protein 20
chr2	156105158	156106201	+	156096230	156106201	A5SS	0.5	50	50	ENSMUST00000037401.10	ENSMUSG00000038116.17	Phf20	chr2	protein_coding	PHD finger protein 20
chr2	156124585	156129721	+	156118588	156129721	A5SS	0.5	50	50	ENSMUST00000037401.10	ENSMUSG00000038116.17	Phf20	chr2	protein_coding	PHD finger protein 20
chr2	156138045	156138569	+	156136195	156138569	A5SS	0.33	50	50	ENSMUST00000037401.10	ENSMUSG00000038116.17	Phf20	chr2	protein_coding	PHD finger protein 20
chr2	156138472	156138569	+	156136195	156138569	A5SS	0.33	50	50	ENSMUST00000037401.10	ENSMUSG00000038116.17	Phf20	chr2	protein_coding	PHD finger protein 20
chr2	156136195	156138576	+	156136199	156138576	A5SS	0.5	50	50	ENSMUST00000152617.8	ENSMUSG00000038116.17	Phf20	chr2	protein_coding	PHD finger protein 20
chr2	156038717	156093696	+	156038717	156065255	3pMXE	0.5	50	50	ENSMUST00000135796.2	ENSMUSG00000038116.17	Phf20	chr2	protein_coding	PHD finger protein 20
chr2	156138472	156138569	+	156138045	156138569	A5SS	0.33	50	50	ENSMUST00000147242.8	ENSMUSG00000038116.17	Phf20	chr2	protein_coding	PHD finger protein 20
chr2	156161983	156175499	+	156161983;156170375	156170238;156175499	ES	0.5	50	50	ENSMUST00000037096.9	ENSMUSG00000038085.14	Cnbd2	chr2	protein_coding	cyclic nucleotide binding domain containing 2
chr2	156175552	156177206	+	156175552	156177170	A3SS	0.5	50	50	ENSMUST00000037096.9	ENSMUSG00000038085.14	Cnbd2	chr2	protein_coding	cyclic nucleotide binding domain containing 2
chr2	156195229	156198446	+	156195229	156207039	A3SS	0.5	50	50	ENSMUST00000037096.9	ENSMUSG00000038085.14	Cnbd2	chr2	protein_coding	cyclic nucleotide binding domain containing 2
chr2	156175936	156177170	+	156175552	156177170	A5SS	0.5	50	50	ENSMUST00000037096.9	ENSMUSG00000038085.14	Cnbd2	chr2	protein_coding	cyclic nucleotide binding domain containing 2
chr2	156263219	156335824	+	156263219;156280553	156280505;156335824	ES	0.33	50	50	ENSMUST00000103137.10	ENSMUSG00000027624.21	Epb41l1	chr2	protein_coding	erythrocyte membrane protein band 4.1 like 1
chr2	156352801	156355948	+	156352801;156353740	156353705;156355948	ES	0.5	50	50	ENSMUST00000103137.10	ENSMUSG00000027624.21	Epb41l1	chr2	protein_coding	erythrocyte membrane protein band 4.1 like 1
chr2	156356130	156368809	+	156356130;156367208	156366801;156368809	ES	0.5	50	50	ENSMUST00000103137.10	ENSMUSG00000027624.21	Epb41l1	chr2	protein_coding	erythrocyte membrane protein band 4.1 like 1
chr2	156351227	156352656	+	156351227	156352653	A3SS	0.33	50	50	ENSMUST00000103137.10	ENSMUSG00000027624.21	Epb41l1	chr2	protein_coding	erythrocyte membrane protein band 4.1 like 1
chr2	156351227	156352677	+	156351227	156352653	A3SS	0.33	50	50	ENSMUST00000103137.10	ENSMUSG00000027624.21	Epb41l1	chr2	protein_coding	erythrocyte membrane protein band 4.1 like 1
chr2	156356130	156363158	+	156356130	156366801	A3SS	0.33	50	50	ENSMUST00000103137.10	ENSMUSG00000027624.21	Epb41l1	chr2	protein_coding	erythrocyte membrane protein band 4.1 like 1
chr2	156317926	156335824	+	156280553	156335824	A5SS	0.33	50	50	ENSMUST00000103137.10	ENSMUSG00000027624.21	Epb41l1	chr2	protein_coding	erythrocyte membrane protein band 4.1 like 1
chr2	156365691	156366801	+	156356130	156366801	A5SS	0.5	50	50	ENSMUST00000103137.10	ENSMUSG00000027624.21	Epb41l1	chr2	protein_coding	erythrocyte membrane protein band 4.1 like 1
chr2	156351227	156352677	+	156351227	156352656	A3SS	0.33	50	50	ENSMUST00000109574.8	ENSMUSG00000027624.21	Epb41l1	chr2	protein_coding	erythrocyte membrane protein band 4.1 like 1
chr2	156356130	156363158	+	156356130	156368809	A3SS	0.33	50	50	ENSMUST00000109574.8	ENSMUSG00000027624.21	Epb41l1	chr2	protein_coding	erythrocyte membrane protein band 4.1 like 1
chr2	156317926	156335824	+	156263219	156335824	A5SS	0.33	50	50	ENSMUST00000103136.8	ENSMUSG00000027624.21	Epb41l1	chr2	protein_coding	erythrocyte membrane protein band 4.1 like 1
chr2	156389803	156392569	+	156389803;156391947	156391805;156392569	ES	0.33	50	50	ENSMUST00000109570.8	ENSMUSG00000027628.11	Aar2	chr2	protein_coding	AAR2 splicing factor homolog
chr2	156389803	156391772	+	156389803	156391805	A3SS	0.33	50	50	ENSMUST00000109570.8	ENSMUSG00000027628.11	Aar2	chr2	protein_coding	AAR2 splicing factor homolog
chr2	156391910	156392569	+	156391947	156392569	A5SS	0.33	50	50	ENSMUST00000109570.8	ENSMUSG00000027628.11	Aar2	chr2	protein_coding	AAR2 splicing factor homolog
chr2	156389803;156391910	156391772;156392569	+	156389803	156392569	cassetteExon	0.5	100	100	ENSMUST00000029158.4	ENSMUSG00000027628.11	Aar2	chr2	protein_coding	AAR2 splicing factor homolog
chr2	156389803;156391947	156391772;156392569	+	156389803	156392569	cassetteExon	0.5	100	100	ENSMUST00000029158.4	ENSMUSG00000027628.11	Aar2	chr2	protein_coding	AAR2 splicing factor homolog
chr2	156389803;156391910	156391805;156392569	+	156389803	156392569	cassetteExon	0.5	100	100	ENSMUST00000029158.4	ENSMUSG00000027628.11	Aar2	chr2	protein_coding	AAR2 splicing factor homolog
chr2	156547890	156552941	+	156547890;156549048	156548998;156552941	ES	0.5	50	50	ENSMUST00000109567.10	ENSMUSG00000061689.16	Dlgap4	chr2	protein_coding	DLG associated protein 4
chr2	156588116	156590864	+	156588116;156590022	156589943;156590864	ES	0.25	50	50	ENSMUST00000109567.10	ENSMUSG00000061689.16	Dlgap4	chr2	protein_coding	DLG associated protein 4
chr2	156588116;156590323	156590252;156590864	+	156588116;156590022	156589943;156590864	MXE	0.5	100	100	ENSMUST00000109567.10	ENSMUSG00000061689.16	Dlgap4	chr2	protein_coding	DLG associated protein 4
chr2	156588116;156590340	156590252;156590864	+	156588116;156590022	156589943;156590864	MXE	0.5	100	100	ENSMUST00000109567.10	ENSMUSG00000061689.16	Dlgap4	chr2	protein_coding	DLG associated protein 4
chr2	156562649	156587755	+	156553181	156587755	A5SS	0.25	50	50	ENSMUST00000109567.10	ENSMUSG00000061689.16	Dlgap4	chr2	protein_coding	DLG associated protein 4
chr2	156563007	156587755	+	156553181	156587755	A5SS	0.25	50	50	ENSMUST00000109567.10	ENSMUSG00000061689.16	Dlgap4	chr2	protein_coding	DLG associated protein 4
chr2	156564022	156587755	+	156553181	156587755	A5SS	0.25	50	50	ENSMUST00000109567.10	ENSMUSG00000061689.16	Dlgap4	chr2	protein_coding	DLG associated protein 4
chr2	156601909	156602771	+	156591276	156602771	A5SS	0.5	50	50	ENSMUST00000109567.10	ENSMUSG00000061689.16	Dlgap4	chr2	protein_coding	DLG associated protein 4
chr2	156603919	156604605	+	156603848	156604605	A5SS	0.5	50	50	ENSMUST00000109567.10	ENSMUSG00000061689.16	Dlgap4	chr2	protein_coding	DLG associated protein 4
chr2	156588116	156590864	+	156588116;156590340	156590252;156590864	ES	0.25	50	50	ENSMUST00000169464.9	ENSMUSG00000061689.16	Dlgap4	chr2	protein_coding	DLG associated protein 4
chr2	156590323	156590864	+	156590340	156590864	A5SS	0.25	50	50	ENSMUST00000169464.9	ENSMUSG00000061689.16	Dlgap4	chr2	protein_coding	DLG associated protein 4
chr2	156563007	156587755	+	156562649	156587755	A5SS	0.25	50	50	ENSMUST00000137356.9	ENSMUSG00000061689.16	Dlgap4	chr2	protein_coding	DLG associated protein 4
chr2	156564022	156587755	+	156562649	156587755	A5SS	0.25	50	50	ENSMUST00000137356.9	ENSMUSG00000061689.16	Dlgap4	chr2	protein_coding	DLG associated protein 4
chr2	156564022	156587755	+	156563007	156587755	A5SS	0.25	50	50	ENSMUST00000131157.9	ENSMUSG00000061689.16	Dlgap4	chr2	protein_coding	DLG associated protein 4
chr2	156588116	156590864	+	156588116;156590340	156589943;156590864	ES	0.25	50	50	ENSMUST00000146412.9	ENSMUSG00000061689.16	Dlgap4	chr2	protein_coding	DLG associated protein 4
chr2	156588116	156590252	+	156588116	156589943	A3SS	0.33	50	50	ENSMUST00000146412.9	ENSMUSG00000061689.16	Dlgap4	chr2	protein_coding	DLG associated protein 4
chr2	156590022	156590864	+	156590340	156590864	A5SS	0.25	50	50	ENSMUST00000146412.9	ENSMUSG00000061689.16	Dlgap4	chr2	protein_coding	DLG associated protein 4
chr2	156588116;156590323	156589943;156590864	+	156588116	156590864	cassetteExon	0.5	100	100	ENSMUST00000177013.8	ENSMUSG00000061689.16	Dlgap4	chr2	protein_coding	DLG associated protein 4
chr2	156588116;156590323	156590252;156590864	+	156588116	156590864	cassetteExon	0.5	100	100	ENSMUST00000177013.8	ENSMUSG00000061689.16	Dlgap4	chr2	protein_coding	DLG associated protein 4
chr2	156620648	156622910	+	156620648;156622563	156622402;156622910	ES	0.5	50	50	ENSMUST00000088552.7	ENSMUSG00000067818.7	Myl9	chr2	protein_coding	myosin, light polypeptide 9, regulatory
chr2	156617458	156620439	+	156617426	156620439	A5SS	0.5	50	50	ENSMUST00000088552.7	ENSMUSG00000067818.7	Myl9	chr2	protein_coding	myosin, light polypeptide 9, regulatory
chr2	156617458	156622402	+	156620648	156622402	A5SS&ES	0.5	50	50	ENSMUST00000088552.7	ENSMUSG00000067818.7	Myl9	chr2	protein_coding	myosin, light polypeptide 9, regulatory
chr2	156617458;156620648	156620439;156622402	+	156617458	156622402	cassetteExon	0.5	100	100	ENSMUST00000145299.2	ENSMUSG00000067818.7	Myl9	chr2	protein_coding	myosin, light polypeptide 9, regulatory
chr2	156617458;156620648	156620439;156622910	+	156617458;156622563	156622402;156622910	MXE	0.5	100	100	ENSMUST00000145299.2	ENSMUSG00000067818.7	Myl9	chr2	protein_coding	myosin, light polypeptide 9, regulatory
chr2	156620648	156622910	+	156620648	156622402	3pMXE	0.5	50	50	ENSMUST00000132985.2	ENSMUSG00000067818.7	Myl9	chr2	protein_coding	myosin, light polypeptide 9, regulatory
chr2	156680456	156681336	-	156680456	156681455	A5SS	0.33	50	50	ENSMUST00000137463.8	ENSMUSG00000087179.9	5730471H19Rik	chr2	lncRNA	RIKEN cDNA 5730471H19 gene
chr2	156680456	156681636	-	156680456	156681455	A5SS	0.33	50	50	ENSMUST00000137463.8	ENSMUSG00000087179.9	5730471H19Rik	chr2	lncRNA	RIKEN cDNA 5730471H19 gene
chr2	156680456	156681336	-	156680456	156681636	A5SS	0.33	50	50	ENSMUST00000149275.3	ENSMUSG00000087179.9	5730471H19Rik	chr2	lncRNA	RIKEN cDNA 5730471H19 gene
chr2	156686301	156688944	+	156686301	156695049	A3SS	0.5	50	50	ENSMUST00000081335.13	ENSMUSG00000062175.14	Tgif2	chr2	protein_coding	TGFB-induced factor homeobox 2
chr2	156683010	156686076	+	156682158	156686076	A5SS	0.5	50	50	ENSMUST00000081335.13	ENSMUSG00000062175.14	Tgif2	chr2	protein_coding	TGFB-induced factor homeobox 2
chr2	156692404	156695049	+	156686301	156695049	A5SS	0.33	50	50	ENSMUST00000081335.13	ENSMUSG00000062175.14	Tgif2	chr2	protein_coding	TGFB-induced factor homeobox 2
chr2	156692900	156695049	+	156686301	156695049	A5SS	0.33	50	50	ENSMUST00000081335.13	ENSMUSG00000062175.14	Tgif2	chr2	protein_coding	TGFB-induced factor homeobox 2
chr2	156692900	156695049	+	156692404	156695049	A5SS	0.33	50	50	ENSMUST00000175634.2	ENSMUSG00000062175.14	Tgif2	chr2	protein_coding	TGFB-induced factor homeobox 2
chr2	156695938	156704519	-	156686809	156704519	A3SS	0.33	50	50	ENSMUST00000185402.2	ENSMUSG00000085741.9	5430405H02Rik	chr2	lncRNA	RIKEN cDNA 5430405H02 gene
chr2	156696224	156704519	-	156686809	156704519	A3SS	0.33	50	50	ENSMUST00000185402.2	ENSMUSG00000085741.9	5430405H02Rik	chr2	lncRNA	RIKEN cDNA 5430405H02 gene
chr2	156695938	156704519	-	156696224	156704519	A3SS	0.5	50	50	ENSMUST00000153616.9	ENSMUSG00000085741.9	5430405H02Rik	chr2	lncRNA	RIKEN cDNA 5430405H02 gene
chr2	156705337	156714258	+	156705337;156707280	156707177;156714258	ES	0.5	50	50	ENSMUST00000029165.4	ENSMUSG00000027637.4	Rab5if	chr2	protein_coding	RAB5 interacting factor
chr2	156714660	156714963	+	156714387	156714963	A5SS	0.5	50	50	ENSMUST00000029165.4	ENSMUSG00000027637.4	Rab5if	chr2	protein_coding	RAB5 interacting factor
chr2	156705337	156714258	+	156705337	156707177	3pMXE	0.5	50	50	ENSMUST00000152942.2	ENSMUSG00000027637.4	Rab5if	chr2	protein_coding	RAB5 interacting factor
chr2	156725639	156728800	-	156725627	156728800	A3SS	0.5	50	50	ENSMUST00000029164.9	ENSMUSG00000027636.12	Sla2	chr2	protein_coding	Src-like-adaptor 2
chr2	156770801	156773136	-	156770801;156771890	156771852;156773136	ES	0.5	50	50	ENSMUST00000069600.13	ENSMUSG00000027634.15	Ndrg3	chr2	protein_coding	N-myc downstream regulated gene 3
chr2	156792059	156795182	-	156792059	156800387	A5SS	0.5	50	50	ENSMUST00000069600.13	ENSMUSG00000027634.15	Ndrg3	chr2	protein_coding	N-myc downstream regulated gene 3
chr2	156800422	156833682	-	156800422	156811957	A5SS&ES	0.5	50	50	ENSMUST00000069600.13	ENSMUSG00000027634.15	Ndrg3	chr2	protein_coding	N-myc downstream regulated gene 3
chr2	156812058	156829596	-	156812058	156833919	A5SS	0.33	50	50	ENSMUST00000069600.13	ENSMUSG00000027634.15	Ndrg3	chr2	protein_coding	N-myc downstream regulated gene 3
chr2	156812058	156833682	-	156812058	156833919	A5SS	0.33	50	50	ENSMUST00000069600.13	ENSMUSG00000027634.15	Ndrg3	chr2	protein_coding	N-myc downstream regulated gene 3
chr2	156800422	156833682	-	156800422;156812058	156811957;156833682	ES	0.33	50	50	ENSMUST00000131955.8	ENSMUSG00000027634.15	Ndrg3	chr2	protein_coding	N-myc downstream regulated gene 3
chr2	156812058;156829718	156829596;156833682	-	156812058	156833682	cassetteExon	0.5	100	100	ENSMUST00000131955.8	ENSMUSG00000027634.15	Ndrg3	chr2	protein_coding	N-myc downstream regulated gene 3
chr2	156829718	156833682	-	156800422	156833682	A3SS	0.33	50	50	ENSMUST00000156651.2	ENSMUSG00000027634.15	Ndrg3	chr2	protein_coding	N-myc downstream regulated gene 3
chr2	156840717	156842754	-	156840717;156841115	156841056;156842754	ES	0.5	50	50	ENSMUST00000103129.9	ENSMUSG00000027635.16	Dsn1	chr2	protein_coding	DSN1 homolog, MIS12 kinetochore complex component
chr2	156847793;156848282	156848180;156848895	-	156847793	156848895	cassetteExon	0.5	100	100	ENSMUST00000103129.9	ENSMUSG00000027635.16	Dsn1	chr2	protein_coding	DSN1 homolog, MIS12 kinetochore complex component
chr2	156847793	156848895	-	156848282	156848895	A3SS	0.5	50	50	ENSMUST00000103130.8	ENSMUSG00000027635.16	Dsn1	chr2	protein_coding	DSN1 homolog, MIS12 kinetochore complex component
chr2	156847793	156848895	-	156847793	156848180	5pMXE	0.5	50	50	ENSMUST00000124671.2	ENSMUSG00000027635.16	Dsn1	chr2	protein_coding	DSN1 homolog, MIS12 kinetochore complex component
chr2	156965369	156971770	-	156965369;156968764	156968692;156971770	ES	0.5	50	50	ENSMUST00000057725.10	ENSMUSG00000027639.17	Samhd1	chr2	protein_coding	SAM domain and HD domain, 1
chr2	156941423;156943363	156943241;156943641	-	156941423	156943641	cassetteExon	0.5	100	100	ENSMUST00000057725.10	ENSMUSG00000027639.17	Samhd1	chr2	protein_coding	SAM domain and HD domain, 1
chr2	156962311	156962402	-	156958427	156962402	A3SS	0.5	50	50	ENSMUST00000057725.10	ENSMUSG00000027639.17	Samhd1	chr2	protein_coding	SAM domain and HD domain, 1
chr2	156941423	156943641	-	156943363	156943641	A3SS	0.5	50	50	ENSMUST00000123932.8	ENSMUSG00000027639.17	Samhd1	chr2	protein_coding	SAM domain and HD domain, 1
chr2	157096191	157096850	-	157094988	157096850	A3SS	0.5	50	50	ENSMUST00000143663.2	ENSMUSG00000074627.12	Mroh8	chr2	protein_coding	maestro heat-like repeat family member 8
chr2	157114005	157121112	-	157100027	157121112	A3SS	0.5	50	50	ENSMUST00000146848.8	ENSMUSG00000074627.12	Mroh8	chr2	protein_coding	maestro heat-like repeat family member 8
chr2	157100027	157106993	-	157100027	157121112	A5SS	0.5	50	50	ENSMUST00000146848.8	ENSMUSG00000074627.12	Mroh8	chr2	protein_coding	maestro heat-like repeat family member 8
chr2	157125697	157132457	+	157125697	157131448	3pMXE	0.5	50	50	ENSMUST00000142463.8	ENSMUSG00000027642.16	Rpn2	chr2	protein_coding	ribophorin II
chr2	157121255	157125504	+	157121132	157125504	A5SS	0.2	50	50	ENSMUST00000142463.8	ENSMUSG00000027642.16	Rpn2	chr2	protein_coding	ribophorin II
chr2	157121443	157125504	+	157121132	157125504	A5SS	0.2	50	50	ENSMUST00000142463.8	ENSMUSG00000027642.16	Rpn2	chr2	protein_coding	ribophorin II
chr2	157121693	157125504	+	157121132	157125504	A5SS	0.2	50	50	ENSMUST00000142463.8	ENSMUSG00000027642.16	Rpn2	chr2	protein_coding	ribophorin II
chr2	157124081	157125504	+	157121132	157125504	A5SS	0.2	50	50	ENSMUST00000142463.8	ENSMUSG00000027642.16	Rpn2	chr2	protein_coding	ribophorin II
chr2	157125697	157132457	+	157125697;157131543	157131448;157132457	ES	0.5	50	50	ENSMUST00000116380.9	ENSMUSG00000027642.16	Rpn2	chr2	protein_coding	ribophorin II
chr2	157163792;157165190	157165143;157167631	+	157163792	157167631	cassetteExon	0.5	100	100	ENSMUST00000116380.9	ENSMUSG00000027642.16	Rpn2	chr2	protein_coding	ribophorin II
chr2	157121443	157125504	+	157121255	157125504	A5SS	0.2	50	50	ENSMUST00000116380.9	ENSMUSG00000027642.16	Rpn2	chr2	protein_coding	ribophorin II
chr2	157121693	157125504	+	157121255	157125504	A5SS	0.2	50	50	ENSMUST00000116380.9	ENSMUSG00000027642.16	Rpn2	chr2	protein_coding	ribophorin II
chr2	157124081	157125504	+	157121255	157125504	A5SS	0.2	50	50	ENSMUST00000116380.9	ENSMUSG00000027642.16	Rpn2	chr2	protein_coding	ribophorin II
chr2	157136800	157137174	+	157136148	157137174	A5SS	0.5	50	50	ENSMUST00000116380.9	ENSMUSG00000027642.16	Rpn2	chr2	protein_coding	ribophorin II
chr2	157156555	157156698	+	157154511	157156698	A5SS	0.5	50	50	ENSMUST00000116380.9	ENSMUSG00000027642.16	Rpn2	chr2	protein_coding	ribophorin II
chr2	157121693	157125504	+	157121443	157125504	A5SS	0.2	50	50	ENSMUST00000127252.8	ENSMUSG00000027642.16	Rpn2	chr2	protein_coding	ribophorin II
chr2	157124081	157125504	+	157121443	157125504	A5SS	0.2	50	50	ENSMUST00000127252.8	ENSMUSG00000027642.16	Rpn2	chr2	protein_coding	ribophorin II
chr2	157124081	157125504	+	157121693	157125504	A5SS	0.2	50	50	ENSMUST00000150349.8	ENSMUSG00000027642.16	Rpn2	chr2	protein_coding	ribophorin II
chr2	157175712	157188492	-	157175712	157179276	5pMXE	0.33	50	50	ENSMUST00000109536.8	ENSMUSG00000027643.10	Ghrh	chr2	protein_coding	growth hormone releasing hormone
chr2	157175712	157189350	-	157175712	157179276	5pMXE	0.33	50	50	ENSMUST00000109536.8	ENSMUSG00000027643.10	Ghrh	chr2	protein_coding	growth hormone releasing hormone
chr2	157175712	157189350	-	157175712	157188492	5pMXE	0.33	50	50	ENSMUST00000029172.2	ENSMUSG00000027643.10	Ghrh	chr2	protein_coding	growth hormone releasing hormone
chr2	157300553;157300780	157300763;157304630	+	157300553	157304630	cassetteExon	0.5	100	100	ENSMUST00000109533.8	ENSMUSG00000027646.16	Src	chr2	protein_coding	Rous sarcoma oncogene
chr2	157297687	157299001	+	157297687	157298997	A3SS	0.5	50	50	ENSMUST00000109533.8	ENSMUSG00000027646.16	Src	chr2	protein_coding	Rous sarcoma oncogene
chr2	157266334	157281121	+	157260432	157281121	A5SS	0.33	50	50	ENSMUST00000109533.8	ENSMUSG00000027646.16	Src	chr2	protein_coding	Rous sarcoma oncogene
chr2	157266334	157297511	+	157281197	157297511	A5SS&ES	0.33	50	50	ENSMUST00000109533.8	ENSMUSG00000027646.16	Src	chr2	protein_coding	Rous sarcoma oncogene
chr2	157266855	157297511	+	157281197	157297511	A5SS&ES	0.33	50	50	ENSMUST00000109533.8	ENSMUSG00000027646.16	Src	chr2	protein_coding	Rous sarcoma oncogene
chr2	157273635	157281121	+	157260432	157281121	A5SS	0.33	50	50	ENSMUST00000109533.8	ENSMUSG00000027646.16	Src	chr2	protein_coding	Rous sarcoma oncogene
chr2	157266334;157266855	157266748;157297511	+	157266334	157297511	cassetteExon	0.5	100	100	ENSMUST00000145715.2	ENSMUSG00000027646.16	Src	chr2	protein_coding	Rous sarcoma oncogene
chr2	157266334;157281197	157281121;157297511	+	157266334	157297511	cassetteExon	0.5	100	100	ENSMUST00000145715.2	ENSMUSG00000027646.16	Src	chr2	protein_coding	Rous sarcoma oncogene
chr2	157266334	157273530	+	157266334	157297511	A3SS	0.25	50	50	ENSMUST00000145715.2	ENSMUSG00000027646.16	Src	chr2	protein_coding	Rous sarcoma oncogene
chr2	157266334;157266855	157266748;157297511	+	157266334;157281197	157281121;157297511	MXE	0.5	100	100	ENSMUST00000029175.14	ENSMUSG00000027646.16	Src	chr2	protein_coding	Rous sarcoma oncogene
chr2	157266334;157273635	157273530;157281121	+	157266334	157281121	cassetteExon	0.5	100	100	ENSMUST00000029175.14	ENSMUSG00000027646.16	Src	chr2	protein_coding	Rous sarcoma oncogene
chr2	157266334;157266855	157266748;157297511	+	157266334;157281197	157273530;157297511	MXE	0.5	100	100	ENSMUST00000133900.8	ENSMUSG00000027646.16	Src	chr2	protein_coding	Rous sarcoma oncogene
chr2	157266334	157273530	+	157266334	157266748	A3SS&ES	0.25	50	50	ENSMUST00000129770.2	ENSMUSG00000027646.16	Src	chr2	protein_coding	Rous sarcoma oncogene
chr2	157400247	157412542	-	157400247	157408168	5pMXE	0.25	50	50	ENSMUST00000109528.9	ENSMUSG00000067787.11	Blcap	chr2	protein_coding	bladder cancer associated protein
chr2	157407742	157408168	-	157400247	157408168	A3SS	0.5	50	50	ENSMUST00000109528.9	ENSMUSG00000067787.11	Blcap	chr2	protein_coding	bladder cancer associated protein
chr2	157400247	157401635	-	157400247	157408168	A5SS	0.25	50	50	ENSMUST00000109528.9	ENSMUSG00000067787.11	Blcap	chr2	protein_coding	bladder cancer associated protein
chr2	157400247	157408140	-	157400247	157408168	A5SS	0.25	50	50	ENSMUST00000109528.9	ENSMUSG00000067787.11	Blcap	chr2	protein_coding	bladder cancer associated protein
chr2	157400247	157412542	-	157400247	157408140	5pMXE	0.25	50	50	ENSMUST00000088494.3	ENSMUSG00000067787.11	Blcap	chr2	protein_coding	bladder cancer associated protein
chr2	157400247	157401635	-	157400247	157408140	A5SS	0.25	50	50	ENSMUST00000088494.3	ENSMUSG00000067787.11	Blcap	chr2	protein_coding	bladder cancer associated protein
chr2	157408967	157412542	-	157400247	157412542	A3SS	0.5	50	50	ENSMUST00000173378.8	ENSMUSG00000067787.11	Blcap	chr2	protein_coding	bladder cancer associated protein
chr2	157400247	157401635	-	157400247	157412542	A5SS	0.25	50	50	ENSMUST00000173378.8	ENSMUSG00000067787.11	Blcap	chr2	protein_coding	bladder cancer associated protein
chr2	157402180;157402455	157402368;157403462	+	157402180	157403462	cassetteExon	0.5	100	100	ENSMUST00000153739.9	ENSMUSG00000067786.17	Nnat	chr2	protein_coding	neuronatin
chr2	157402180;157403159	157403133;157403462	+	157402180	157403462	cassetteExon	0.5	100	100	ENSMUST00000153739.9	ENSMUSG00000067786.17	Nnat	chr2	protein_coding	neuronatin
chr2	157402180;157403208	157403133;157403462	+	157402180	157403462	cassetteExon	0.5	100	100	ENSMUST00000153739.9	ENSMUSG00000067786.17	Nnat	chr2	protein_coding	neuronatin
chr2	157402180;157403213	157403133;157403462	+	157402180	157403462	cassetteExon	0.5	100	100	ENSMUST00000153739.9	ENSMUSG00000067786.17	Nnat	chr2	protein_coding	neuronatin
chr2	157402180	157403436	+	157402180	157403462	A3SS	0.25	50	50	ENSMUST00000153739.9	ENSMUSG00000067786.17	Nnat	chr2	protein_coding	neuronatin
chr2	157402180;157402455	157402368;157403133	+	157402180	157403133	cassetteExon	0.5	100	100	ENSMUST00000173595.2	ENSMUSG00000067786.17	Nnat	chr2	protein_coding	neuronatin
chr2	157402180;157402455	157402368;157403462	+	157402180;157403208	157403133;157403462	MXE	0.5	100	100	ENSMUST00000173595.2	ENSMUSG00000067786.17	Nnat	chr2	protein_coding	neuronatin
chr2	157402180	157403436	+	157402180	157403133	A3SS&ES	0.25	50	50	ENSMUST00000173595.2	ENSMUSG00000067786.17	Nnat	chr2	protein_coding	neuronatin
chr2	157403159	157403462	+	157403208	157403462	A5SS	0.2	50	50	ENSMUST00000173595.2	ENSMUSG00000067786.17	Nnat	chr2	protein_coding	neuronatin
chr2	157403213	157403462	+	157403208	157403462	A5SS	0.2	50	50	ENSMUST00000173595.2	ENSMUSG00000067786.17	Nnat	chr2	protein_coding	neuronatin
chr2	157402180;157402455	157402368;157403462	+	157402180;157403213	157403133;157403462	MXE	0.5	100	100	ENSMUST00000109526.2	ENSMUSG00000067786.17	Nnat	chr2	protein_coding	neuronatin
chr2	157403159	157403462	+	157403213	157403462	A5SS	0.2	50	50	ENSMUST00000109526.2	ENSMUSG00000067786.17	Nnat	chr2	protein_coding	neuronatin
chr2	157402180;157402455	157402368;157403462	+	157402180;157403159	157403133;157403462	MXE	0.5	100	100	ENSMUST00000173839.2	ENSMUSG00000067786.17	Nnat	chr2	protein_coding	neuronatin
chr2	157402455	157403462	+	157402455;157403213	157403133;157403462	ES	0.2	50	50	ENSMUST00000173041.8	ENSMUSG00000067786.17	Nnat	chr2	protein_coding	neuronatin
chr2	157402180	157403436	+	157402180	157402368	A3SS&ES	0.25	50	50	ENSMUST00000173041.8	ENSMUSG00000067786.17	Nnat	chr2	protein_coding	neuronatin
chr2	157402455	157403462	+	157402455	157403133	3pMXE	0.5	50	50	ENSMUST00000173793.8	ENSMUSG00000067786.17	Nnat	chr2	protein_coding	neuronatin
chr2	157402455;157403159	157403133;157403462	+	157402455	157403462	cassetteExon	0.5	100	100	ENSMUST00000088484.6	ENSMUSG00000067786.17	Nnat	chr2	protein_coding	neuronatin
chr2	157402455;157403208	157403133;157403462	+	157402455	157403462	cassetteExon	0.5	100	100	ENSMUST00000088484.6	ENSMUSG00000067786.17	Nnat	chr2	protein_coding	neuronatin
chr2	157402180	157403133	+	157402455	157403133	A5SS	0.5	50	50	ENSMUST00000152605.2	ENSMUSG00000067786.17	Nnat	chr2	protein_coding	neuronatin
chr2	157402180	157403462	+	157403208	157403462	A5SS&ES	0.2	50	50	ENSMUST00000152605.2	ENSMUSG00000067786.17	Nnat	chr2	protein_coding	neuronatin
chr2	157402180	157403462	+	157403213	157403462	5pMXE	0.2	50	50	ENSMUST00000134513.2	ENSMUSG00000067786.17	Nnat	chr2	protein_coding	neuronatin
chr2	157402455	157403462	+	157403213	157403462	5pMXE	0.2	50	50	ENSMUST00000134513.2	ENSMUSG00000067786.17	Nnat	chr2	protein_coding	neuronatin
chr2	157630382	157630912	+	157621838	157630912	A5SS	0.5	50	50	ENSMUST00000029178.7	ENSMUSG00000027649.16	Ctnnbl1	chr2	protein_coding	catenin, beta like 1
chr2	157631865	157648595	+	157641444	157648595	A5SS&ES	0.5	50	50	ENSMUST00000029178.7	ENSMUSG00000027649.16	Ctnnbl1	chr2	protein_coding	catenin, beta like 1
chr2	157631865	157632616	+	157631865	157648595	A3SS	0.5	50	50	ENSMUST00000129842.8	ENSMUSG00000027649.16	Ctnnbl1	chr2	protein_coding	catenin, beta like 1
chr2	157851278	157853025	-	157851278	157870294	A5SS	0.5	50	50	ENSMUST00000029179.11	ENSMUSG00000027650.13	Tti1	chr2	protein_coding	TELO2 interacting protein 1
chr2	157870965	157885326	+	157870965;157878045	157877916;157885326	ES	0.5	50	50	ENSMUST00000103123.10	ENSMUSG00000027651.17	Rprd1b	chr2	protein_coding	regulation of nuclear pre-mRNA domain containing 1B
chr2	157900747;157912576	157912376;157916850	+	157900747	157916850	cassetteExon	0.5	100	100	ENSMUST00000103123.10	ENSMUSG00000027651.17	Rprd1b	chr2	protein_coding	regulation of nuclear pre-mRNA domain containing 1B
chr2	157900747;157912576	157912481;157916850	+	157900747	157916850	cassetteExon	0.5	100	100	ENSMUST00000103123.10	ENSMUSG00000027651.17	Rprd1b	chr2	protein_coding	regulation of nuclear pre-mRNA domain containing 1B
chr2	157885459	157889836	+	157885459	157889839	A3SS	0.5	50	50	ENSMUST00000103123.10	ENSMUSG00000027651.17	Rprd1b	chr2	protein_coding	regulation of nuclear pre-mRNA domain containing 1B
chr2	157900747	157912376	+	157900747	157912481	A3SS	0.33	50	50	ENSMUST00000109518.8	ENSMUSG00000027651.17	Rprd1b	chr2	protein_coding	regulation of nuclear pre-mRNA domain containing 1B
chr2	157892133	157900572	+	157892133	157973059	A3SS	0.5	50	50	ENSMUST00000152452.8	ENSMUSG00000027651.17	Rprd1b	chr2	protein_coding	regulation of nuclear pre-mRNA domain containing 1B
chr2	157900747	157916850	+	157900747	157912376	3pMXE	0.33	50	50	ENSMUST00000135603.2	ENSMUSG00000027651.17	Rprd1b	chr2	protein_coding	regulation of nuclear pre-mRNA domain containing 1B
chr2	157971350	157980627	-	157976289	157980627	A3SS&ES	0.5	50	50	ENSMUST00000103122.10	ENSMUSG00000037820.16	Tgm2	chr2	protein_coding	transglutaminase 2, C polypeptide
chr2	157980869	157981596	-	157980869	157984915	A5SS	0.5	50	50	ENSMUST00000103122.10	ENSMUSG00000037820.16	Tgm2	chr2	protein_coding	transglutaminase 2, C polypeptide
chr2	158117909	158118881	+	158117909	158118878	A3SS	0.5	50	50	ENSMUST00000109499.8	ENSMUSG00000052922.10	Bpi	chr2	protein_coding	bactericidal permeablility increasing protein
chr2	158116771	158117842	+	158116762	158117842	A5SS	0.5	50	50	ENSMUST00000109499.8	ENSMUSG00000052922.10	Bpi	chr2	protein_coding	bactericidal permeablility increasing protein
chr2	158164034	158166531	+	158164034	158166429	A3SS	0.5	50	50	ENSMUST00000016168.9	ENSMUSG00000016024.10	Lbp	chr2	protein_coding	lipopolysaccharide binding protein
chr2	158199183;158200260	158200125;158201102	-	158199183	158201102	cassetteExon	0.5	100	100	ENSMUST00000141809.8	ENSMUSG00000085385.8	Snhg17	chr2	lncRNA	small nucleolar RNA host gene 17
chr2	158202990	158203325	-	158203116	158203325	A3SS	0.5	50	50	ENSMUST00000141809.8	ENSMUSG00000085385.8	Snhg17	chr2	lncRNA	small nucleolar RNA host gene 17
chr2	158201352	158202384	-	158201352	158202379	A5SS	0.33	50	50	ENSMUST00000141809.8	ENSMUSG00000085385.8	Snhg17	chr2	lncRNA	small nucleolar RNA host gene 17
chr2	158201352	158202447	-	158201352	158202379	A5SS	0.33	50	50	ENSMUST00000141809.8	ENSMUSG00000085385.8	Snhg17	chr2	lncRNA	small nucleolar RNA host gene 17
chr2	158201352	158202384	-	158201352	158202447	A5SS	0.33	50	50	ENSMUST00000152125.8	ENSMUSG00000085385.8	Snhg17	chr2	lncRNA	small nucleolar RNA host gene 17
chr2	158201352	158202384	-	158201251	158202384	A3SS	0.5	50	50	ENSMUST00000133449.8	ENSMUSG00000085385.8	Snhg17	chr2	lncRNA	small nucleolar RNA host gene 17
chr2	158199183	158201102	-	158199183	158200125	5pMXE	0.5	50	50	ENSMUST00000154242.2	ENSMUSG00000085385.8	Snhg17	chr2	lncRNA	small nucleolar RNA host gene 17
chr2	158218246;158218744	158218653;158218914	+	158218246	158218914	cassetteExon	0.5	100	100	ENSMUST00000239262.2	ENSMUSG00000044349.17	Snhg11	chr2	protein_coding	small nucleolar RNA host gene 11
chr2	158218246;158218744	158218665;158218914	+	158218246	158218914	cassetteExon	0.5	100	100	ENSMUST00000239262.2	ENSMUSG00000044349.17	Snhg11	chr2	protein_coding	small nucleolar RNA host gene 11
chr2	158218246	158218653	+	158218246	158218665	A3SS	0.33	50	50	ENSMUST00000149303.8	ENSMUSG00000044349.17	Snhg11	chr2	protein_coding	small nucleolar RNA host gene 11
chr2	158222960	158224424	+	158222960	158225001	A3SS	0.5	50	50	ENSMUST00000239310.2	ENSMUSG00000044349.17	Snhg11	chr2	protein_coding	small nucleolar RNA host gene 11
chr2	158279396	158285158	+	158279396;158282891	158282690;158285158	ES	0.5	50	50	ENSMUST00000109486.9	ENSMUSG00000027652.16	Ralgapb	chr2	protein_coding	Ral GTPase activating protein, beta subunit (non-catalytic)
chr2	158279396;158281484	158281449;158282690	+	158279396	158282690	cassetteExon	0.5	100	100	ENSMUST00000109486.9	ENSMUSG00000027652.16	Ralgapb	chr2	protein_coding	Ral GTPase activating protein, beta subunit (non-catalytic)
chr2	158282891	158285224	+	158282891	158285158	A3SS	0.5	50	50	ENSMUST00000109486.9	ENSMUSG00000027652.16	Ralgapb	chr2	protein_coding	Ral GTPase activating protein, beta subunit (non-catalytic)
chr2	158290369	158292109	+	158290369	158292097	A3SS	0.5	50	50	ENSMUST00000109486.9	ENSMUSG00000027652.16	Ralgapb	chr2	protein_coding	Ral GTPase activating protein, beta subunit (non-catalytic)
chr2	158324421	158326333	+	158324421	158334284	A3SS	0.5	50	50	ENSMUST00000109486.9	ENSMUSG00000027652.16	Ralgapb	chr2	protein_coding	Ral GTPase activating protein, beta subunit (non-catalytic)
chr2	158252366	158262734	+	158252023	158262734	A5SS	0.5	50	50	ENSMUST00000109486.9	ENSMUSG00000027652.16	Ralgapb	chr2	protein_coding	Ral GTPase activating protein, beta subunit (non-catalytic)
chr2	158279396	158281449	+	158279396	158285158	A3SS	0.33	50	50	ENSMUST00000173137.2	ENSMUSG00000027652.16	Ralgapb	chr2	protein_coding	Ral GTPase activating protein, beta subunit (non-catalytic)
chr2	158344686	158347712	+	158344789	158347712	A5SS	0.5	50	50	ENSMUST00000059889.4	ENSMUSG00000044405.5	Adig	chr2	protein_coding	adipogenin
chr2	158344686	158345852	+	158344686	158347712	A3SS	0.5	50	50	ENSMUST00000109484.2	ENSMUSG00000044405.5	Adig	chr2	protein_coding	adipogenin
chr2	158445770	158452448	-	158439459	158452448	A3SS	0.33	50	50	ENSMUST00000145773.2	ENSMUSG00000086496.2	Gm14204	chr2	lncRNA	predicted gene 14204
chr2	158446096	158452448	-	158439459	158452448	A3SS	0.33	50	50	ENSMUST00000145773.2	ENSMUSG00000086496.2	Gm14204	chr2	lncRNA	predicted gene 14204
chr2	158445105;158445770	158445609;158452448	-	158445105;158446096	158445926;158452448	MXE	0.5	100	100	ENSMUST00000123944.2	ENSMUSG00000086496.2	Gm14204	chr2	lncRNA	predicted gene 14204
chr2	158446096	158452448	-	158445770	158452448	A3SS	0.33	50	50	ENSMUST00000155319.2	ENSMUSG00000086496.2	Gm14204	chr2	lncRNA	predicted gene 14204
chr2	158477346	158477947	+	158477346	158477928	A3SS	0.5	50	50	ENSMUST00000183731.8	ENSMUSG00000037761.17	Actr5	chr2	protein_coding	ARP5 actin-related protein 5
chr2	158474374;158476835	158476467;158477227	+	158474374	158477227	cassetteExon	0.5	100	100	ENSMUST00000142531.8	ENSMUSG00000037761.17	Actr5	chr2	protein_coding	ARP5 actin-related protein 5
chr2	158593118	158597733	+	158593118;158597189	158597064;158597733	ES	0.5	50	50	ENSMUST00000129902.2	ENSMUSG00000037754.14	Ppp1r16b	chr2	protein_coding	protein phosphatase 1, regulatory subunit 16B
chr2	158509169	158537782	+	158508745	158537782	A5SS	0.5	50	50	ENSMUST00000129902.2	ENSMUSG00000037754.14	Ppp1r16b	chr2	protein_coding	protein phosphatase 1, regulatory subunit 16B
chr2	158688909;158691473	158691402;158693631	+	158688909	158693631	cassetteExon	0.5	100	100	ENSMUST00000029186.14	ENSMUSG00000027655.15	Dhx35	chr2	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 35
chr2	158643428	158648323	+	158643428	158648318	A3SS	0.5	50	50	ENSMUST00000029186.14	ENSMUSG00000027655.15	Dhx35	chr2	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 35
chr2	158648920	158657330	+	158648920	158657350	A3SS	0.33	50	50	ENSMUST00000029186.14	ENSMUSG00000027655.15	Dhx35	chr2	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 35
chr2	158638036	158643295	+	158636848	158643295	A5SS	0.5	50	50	ENSMUST00000029186.14	ENSMUSG00000027655.15	Dhx35	chr2	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 35
chr2	158669401	158669823	+	158668337	158669823	A5SS	0.5	50	50	ENSMUST00000029186.14	ENSMUSG00000027655.15	Dhx35	chr2	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 35
chr2	158692661	158693631	+	158688909	158693631	A5SS	0.33	50	50	ENSMUST00000029186.14	ENSMUSG00000027655.15	Dhx35	chr2	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 35
chr2	158692661	158693631	+	158691473	158693631	A5SS	0.33	50	50	ENSMUST00000109478.9	ENSMUSG00000027655.15	Dhx35	chr2	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 35
chr2	158648920	158657330	+	158648920	158668225	A3SS	0.33	50	50	ENSMUST00000156893.2	ENSMUSG00000027655.15	Dhx35	chr2	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 35
chr2	158648920	158657350	+	158648920	158668225	A3SS	0.33	50	50	ENSMUST00000156893.2	ENSMUSG00000027655.15	Dhx35	chr2	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 35
chr2	158662365	158668225	+	158648920	158668225	A5SS	0.5	50	50	ENSMUST00000156893.2	ENSMUSG00000027655.15	Dhx35	chr2	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 35
chr2	160153987	160159905	-	160153987	160155409	5pMXE	0.5	50	50	ENSMUST00000109475.3	ENSMUSG00000074623.5	Gm826	chr2	protein_coding	predicted gene 826
chr2	160159935	160169016	-	160159935	160175823	A5SS	0.5	50	50	ENSMUST00000138905.2	ENSMUSG00000074623.5	Gm826	chr2	protein_coding	predicted gene 826
chr2	160544422	160544622	+	160540159	160544622	A5SS	0.5	50	50	ENSMUST00000109468.3	ENSMUSG00000070544.7	Top1	chr2	protein_coding	topoisomerase (DNA) I
chr2	160598564	160599134	+	160598564;160598886	160598790;160599134	ES	0.5	50	50	ENSMUST00000151590.8	ENSMUSG00000016933.18	Plcg1	chr2	protein_coding	phospholipase C, gamma 1
chr2	160603843	160616448	+	160603843	160604014	3pMXE	0.5	50	50	ENSMUST00000151590.8	ENSMUSG00000016933.18	Plcg1	chr2	protein_coding	phospholipase C, gamma 1
chr2	160600049	160601343	+	160600049	160601374	A3SS	0.5	50	50	ENSMUST00000151590.8	ENSMUSG00000016933.18	Plcg1	chr2	protein_coding	phospholipase C, gamma 1
chr2	160603568	160603656	+	160603568	160603659	A3SS	0.5	50	50	ENSMUST00000151590.8	ENSMUSG00000016933.18	Plcg1	chr2	protein_coding	phospholipase C, gamma 1
chr2	160583060	160589695	+	160573953	160589695	A5SS	0.5	50	50	ENSMUST00000151590.8	ENSMUSG00000016933.18	Plcg1	chr2	protein_coding	phospholipase C, gamma 1
chr2	160595484	160595563	+	160595489	160595563	A5SS	0.5	50	50	ENSMUST00000151590.8	ENSMUSG00000016933.18	Plcg1	chr2	protein_coding	phospholipase C, gamma 1
chr2	160624299	160674217	-	160593829	160674217	A3SS	0.5	50	50	ENSMUST00000133937.9	ENSMUSG00000035877.18	Zhx3	chr2	protein_coding	zinc fingers and homeoboxes 3
chr2	160674338	160701388	-	160674338	160714711	A5SS	0.5	50	50	ENSMUST00000133937.9	ENSMUSG00000035877.18	Zhx3	chr2	protein_coding	zinc fingers and homeoboxes 3
chr2	160624299	160674217	-	160624299	160714350	A5SS	0.5	50	50	ENSMUST00000103111.9	ENSMUSG00000035877.18	Zhx3	chr2	protein_coding	zinc fingers and homeoboxes 3
chr2	160741749	160743753	+	160741749;160743670	160743578;160743753	ES	0.5	50	50	ENSMUST00000109456.9	ENSMUSG00000027412.13	Lpin3	chr2	protein_coding	lipin 3
chr2	160741749	160743548	+	160741749	160743578	A3SS	0.33	50	50	ENSMUST00000109456.9	ENSMUSG00000027412.13	Lpin3	chr2	protein_coding	lipin 3
chr2	160730137	160733916	+	160722716	160733916	A5SS	0.5	50	50	ENSMUST00000109456.9	ENSMUSG00000027412.13	Lpin3	chr2	protein_coding	lipin 3
chr2	160741749;160743670	160743548;160743753	+	160741749	160743753	cassetteExon	0.5	100	100	ENSMUST00000109455.9	ENSMUSG00000027412.13	Lpin3	chr2	protein_coding	lipin 3
chr2	160741749	160743753	+	160743670	160743753	5pMXE	0.5	50	50	ENSMUST00000124920.2	ENSMUSG00000027412.13	Lpin3	chr2	protein_coding	lipin 3
chr2	160751236	160751527	-	160751095	160751527	A3SS	0.5	50	50	ENSMUST00000109454.8	ENSMUSG00000050700.12	Emilin3	chr2	protein_coding	elastin microfibril interfacer 3
chr2	160884049	160894308	-	160884052	160894308	A3SS	0.5	50	50	ENSMUST00000039782.14	ENSMUSG00000057133.15	Chd6	chr2	protein_coding	chromodomain helicase DNA binding protein 6
chr2	160803934	160806678	-	160803934	160807089	A5SS	0.5	50	50	ENSMUST00000039782.14	ENSMUSG00000057133.15	Chd6	chr2	protein_coding	chromodomain helicase DNA binding protein 6
chr2	161402205;161402908	161402849;161406547	-	161402205	161406547	cassetteExon	0.5	100	100	ENSMUST00000109445.9	ENSMUSG00000053141.17	Ptprt	chr2	protein_coding	protein tyrosine phosphatase, receptor type, T
chr2	161498210;161529018	161528989;161539894	-	161498210	161539894	cassetteExon	0.5	100	100	ENSMUST00000109445.9	ENSMUSG00000053141.17	Ptprt	chr2	protein_coding	protein tyrosine phosphatase, receptor type, T
chr2	161540029;161560331	161560275;161574799	-	161540029	161574799	cassetteExon	0.5	100	100	ENSMUST00000109445.9	ENSMUSG00000053141.17	Ptprt	chr2	protein_coding	protein tyrosine phosphatase, receptor type, T
chr2	161854120	161977132	-	161769698	161977132	A3SS	0.5	50	50	ENSMUST00000109445.9	ENSMUSG00000053141.17	Ptprt	chr2	protein_coding	protein tyrosine phosphatase, receptor type, T
chr2	161608417	161641880	-	161608417	161652470	A5SS	0.5	50	50	ENSMUST00000109445.9	ENSMUSG00000053141.17	Ptprt	chr2	protein_coding	protein tyrosine phosphatase, receptor type, T
chr2	162774062;162774899	162774735;162775346	+	162774062	162775346	cassetteExon	0.5	100	100	ENSMUST00000130411.7	ENSMUSG00000016921.15	Srsf6	chr2	protein_coding	serine and arginine-rich splicing factor 6
chr2	162774062;162775002	162774735;162775346	+	162774062	162775346	cassetteExon	0.5	100	100	ENSMUST00000130411.7	ENSMUSG00000016921.15	Srsf6	chr2	protein_coding	serine and arginine-rich splicing factor 6
chr2	162774899	162775346	+	162775002	162775346	A5SS	0.33	50	50	ENSMUST00000017065.15	ENSMUSG00000016921.15	Srsf6	chr2	protein_coding	serine and arginine-rich splicing factor 6
chr2	162790192	162790690	+	162790192;162790548	162790401;162790690	ES	0.5	50	50	ENSMUST00000153416.8	ENSMUSG00000035576.14	L3mbtl1	chr2	protein_coding	L3MBTL1 histone methyl-lysine binding protein
chr2	162786513;162788136	162788002;162789099	+	162786513	162789099	cassetteExon	0.5	100	100	ENSMUST00000153416.8	ENSMUSG00000035576.14	L3mbtl1	chr2	protein_coding	L3MBTL1 histone methyl-lysine binding protein
chr2	162789244	162789728	+	162789244	162789600	A3SS	0.5	50	50	ENSMUST00000153416.8	ENSMUSG00000035576.14	L3mbtl1	chr2	protein_coding	L3MBTL1 histone methyl-lysine binding protein
chr2	162791459	162801436	+	162791459	162801443	A3SS	0.5	50	50	ENSMUST00000153416.8	ENSMUSG00000035576.14	L3mbtl1	chr2	protein_coding	L3MBTL1 histone methyl-lysine binding protein
chr2	162801524	162802001	+	162801524	162801940	A3SS	0.5	50	50	ENSMUST00000153416.8	ENSMUSG00000035576.14	L3mbtl1	chr2	protein_coding	L3MBTL1 histone methyl-lysine binding protein
chr2	162785455	162789099	+	162786513	162789099	A5SS&ES	0.33	50	50	ENSMUST00000153416.8	ENSMUSG00000035576.14	L3mbtl1	chr2	protein_coding	L3MBTL1 histone methyl-lysine binding protein
chr2	162788136	162789099	+	162785455	162789099	A5SS	0.33	50	50	ENSMUST00000156954.8	ENSMUSG00000035576.14	L3mbtl1	chr2	protein_coding	L3MBTL1 histone methyl-lysine binding protein
chr2	162840186	162845192	+	162840186;162841188	162841102;162845192	ES	0.5	50	50	ENSMUST00000018012.14	ENSMUSG00000017868.17	Sgk2	chr2	protein_coding	serum/glucocorticoid regulated kinase 2
chr2	162830116	162833335	+	162829515	162833335	A5SS	0.5	50	50	ENSMUST00000018012.14	ENSMUSG00000017868.17	Sgk2	chr2	protein_coding	serum/glucocorticoid regulated kinase 2
chr2	162859576	162864295	+	162859453	162864295	A5SS	0.5	50	50	ENSMUST00000018002.13	ENSMUSG00000017858.13	Ift52	chr2	protein_coding	intraflagellar transport 52
chr2	162917695;162917955	162917839;162919707	+	162917695	162919707	cassetteExon	0.5	100	100	ENSMUST00000018005.10	ENSMUSG00000017861.12	Mybl2	chr2	protein_coding	myeloblastosis oncogene-like 2
chr2	163163468	163164864	+	163163468	163164664	A3SS	0.5	50	50	ENSMUST00000109428.9	ENSMUSG00000074607.12	Tox2	chr2	protein_coding	TOX high mobility group box family member 2
chr2	163046701	163089687	+	163045182	163089687	A5SS	0.33	50	50	ENSMUST00000109428.9	ENSMUSG00000074607.12	Tox2	chr2	protein_coding	TOX high mobility group box family member 2
chr2	163067507	163089687	+	163045182	163089687	A5SS	0.33	50	50	ENSMUST00000109428.9	ENSMUSG00000074607.12	Tox2	chr2	protein_coding	TOX high mobility group box family member 2
chr2	163067507	163089687	+	163046701	163089687	A5SS	0.33	50	50	ENSMUST00000128999.8	ENSMUSG00000074607.12	Tox2	chr2	protein_coding	TOX high mobility group box family member 2
chr2	163257575	163266388	-	163257575	163261332	5pMXE	0.25	50	50	ENSMUST00000046908.10	ENSMUSG00000035399.13	Oser1	chr2	protein_coding	oxidative stress responsive serine rich 1
chr2	163257575	163258918	-	163257575	163261332	A5SS	0.25	50	50	ENSMUST00000046908.10	ENSMUSG00000035399.13	Oser1	chr2	protein_coding	oxidative stress responsive serine rich 1
chr2	163257575	163260961	-	163257575	163261332	A5SS	0.25	50	50	ENSMUST00000046908.10	ENSMUSG00000035399.13	Oser1	chr2	protein_coding	oxidative stress responsive serine rich 1
chr2	163265188	163266388	-	163257575	163266388	A3SS	0.5	50	50	ENSMUST00000104954.9	ENSMUSG00000035399.13	Oser1	chr2	protein_coding	oxidative stress responsive serine rich 1
chr2	163257575	163258918	-	163257575	163266388	A5SS	0.25	50	50	ENSMUST00000104954.9	ENSMUSG00000035399.13	Oser1	chr2	protein_coding	oxidative stress responsive serine rich 1
chr2	163257575	163260961	-	163257575	163266388	A5SS	0.25	50	50	ENSMUST00000104954.9	ENSMUSG00000035399.13	Oser1	chr2	protein_coding	oxidative stress responsive serine rich 1
chr2	163257575	163258918	-	163257575	163260961	A5SS	0.25	50	50	ENSMUST00000140454.8	ENSMUSG00000035399.13	Oser1	chr2	protein_coding	oxidative stress responsive serine rich 1
chr2	163288146	163292486	+	163288146;163289592	163289419;163292486	ES	0.5	50	50	ENSMUST00000109420.10	ENSMUSG00000017943.16	Gdap1l1	chr2	protein_coding	ganglioside-induced differentiation-associated protein 1-like 1
chr2	163280645	163287945	+	163280645	163287954	A3SS	0.5	50	50	ENSMUST00000109420.10	ENSMUSG00000017943.16	Gdap1l1	chr2	protein_coding	ganglioside-induced differentiation-associated protein 1-like 1
chr2	163338551	163383423	-	163338551;163338858	163338655;163383423	ES	0.5	50	50	ENSMUST00000141329.8	ENSMUSG00000046840.17	Hnf4aos	chr2	lncRNA	hepatic nuclear factor 4 alpha, opposite strand
chr2	163336228	163338487	-	163336078	163338487	A3SS	0.5	50	50	ENSMUST00000141329.8	ENSMUSG00000046840.17	Hnf4aos	chr2	lncRNA	hepatic nuclear factor 4 alpha, opposite strand
chr2	163388862	163393497	+	163348907	163393497	A5SS	0.25	50	50	ENSMUST00000143911.8	ENSMUSG00000017950.17	Hnf4a	chr2	protein_coding	hepatic nuclear factor 4, alpha
chr2	163389339	163393497	+	163348907	163393497	A5SS	0.25	50	50	ENSMUST00000143911.8	ENSMUSG00000017950.17	Hnf4a	chr2	protein_coding	hepatic nuclear factor 4, alpha
chr2	163392162	163393497	+	163348907	163393497	A5SS	0.25	50	50	ENSMUST00000143911.8	ENSMUSG00000017950.17	Hnf4a	chr2	protein_coding	hepatic nuclear factor 4, alpha
chr2	163389339	163393497	+	163388862	163393497	A5SS	0.25	50	50	ENSMUST00000131658.2	ENSMUSG00000017950.17	Hnf4a	chr2	protein_coding	hepatic nuclear factor 4, alpha
chr2	163392162	163393497	+	163388862	163393497	A5SS	0.25	50	50	ENSMUST00000131658.2	ENSMUSG00000017950.17	Hnf4a	chr2	protein_coding	hepatic nuclear factor 4, alpha
chr2	163392162	163393497	+	163389339	163393497	A5SS	0.25	50	50	ENSMUST00000109411.8	ENSMUSG00000017950.17	Hnf4a	chr2	protein_coding	hepatic nuclear factor 4, alpha
chr2	163449594	163455655	+	163449594;163453872	163453679;163455655	ES	0.5	50	50	ENSMUST00000171696.8	ENSMUSG00000017679.17	Ttpal	chr2	protein_coding	tocopherol (alpha) transfer protein-like
chr2	163444334	163448948	+	163444334	163449129	A3SS	0.33	50	50	ENSMUST00000171696.8	ENSMUSG00000017679.17	Ttpal	chr2	protein_coding	tocopherol (alpha) transfer protein-like
chr2	163444334	163449132	+	163444334	163449129	A3SS	0.33	50	50	ENSMUST00000171696.8	ENSMUSG00000017679.17	Ttpal	chr2	protein_coding	tocopherol (alpha) transfer protein-like
chr2	163444334	163448948	+	163444334	163449132	A3SS	0.33	50	50	ENSMUST00000109408.10	ENSMUSG00000017679.17	Ttpal	chr2	protein_coding	tocopherol (alpha) transfer protein-like
chr2	163444589	163449132	+	163444334	163449132	A5SS	0.5	50	50	ENSMUST00000109408.10	ENSMUSG00000017679.17	Ttpal	chr2	protein_coding	tocopherol (alpha) transfer protein-like
chr2	163449594	163455655	+	163449594	163453679	3pMXE	0.5	50	50	ENSMUST00000144729.2	ENSMUSG00000017679.17	Ttpal	chr2	protein_coding	tocopherol (alpha) transfer protein-like
chr2	163449594	163455655	+	163453872	163455655	5pMXE	0.5	50	50	ENSMUST00000132904.2	ENSMUSG00000017679.17	Ttpal	chr2	protein_coding	tocopherol (alpha) transfer protein-like
chr2	163481247;163485218	163485062;163486918	-	163481247	163486918	cassetteExon	0.5	100	100	ENSMUST00000017851.4	ENSMUSG00000017707.10	Serinc3	chr2	protein_coding	serine incorporator 3
chr2	163500412	163563048	+	163500412;163545475	163545406;163563048	ES	0.33	50	50	ENSMUST00000147385.8	ENSMUSG00000035268.15	Pkig	chr2	protein_coding	protein kinase inhibitor, gamma
chr2	163500412;163501155	163501070;163545406	+	163500412	163545406	cassetteExon	0.5	100	100	ENSMUST00000147385.8	ENSMUSG00000035268.15	Pkig	chr2	protein_coding	protein kinase inhibitor, gamma
chr2	163500579	163545406	+	163500412	163545406	A5SS	0.2	50	50	ENSMUST00000147385.8	ENSMUSG00000035268.15	Pkig	chr2	protein_coding	protein kinase inhibitor, gamma
chr2	163500579	163563048	+	163545475	163563048	A5SS&ES	0.33	50	50	ENSMUST00000147385.8	ENSMUSG00000035268.15	Pkig	chr2	protein_coding	protein kinase inhibitor, gamma
chr2	163503526	163545406	+	163500412	163545406	A5SS	0.2	50	50	ENSMUST00000147385.8	ENSMUSG00000035268.15	Pkig	chr2	protein_coding	protein kinase inhibitor, gamma
chr2	163536076	163545406	+	163500412	163545406	A5SS	0.2	50	50	ENSMUST00000147385.8	ENSMUSG00000035268.15	Pkig	chr2	protein_coding	protein kinase inhibitor, gamma
chr2	163500412	163501070	+	163500412	163563048	A3SS	0.33	50	50	ENSMUST00000164399.8	ENSMUSG00000035268.15	Pkig	chr2	protein_coding	protein kinase inhibitor, gamma
chr2	163500579	163563048	+	163500412	163563048	A5SS	0.33	50	50	ENSMUST00000164399.8	ENSMUSG00000035268.15	Pkig	chr2	protein_coding	protein kinase inhibitor, gamma
chr2	163500579	163501070	+	163500412	163501070	A5SS	0.5	50	50	ENSMUST00000099105.9	ENSMUSG00000035268.15	Pkig	chr2	protein_coding	protein kinase inhibitor, gamma
chr2	163500579	163545406	+	163501155	163545406	A5SS&ES	0.2	50	50	ENSMUST00000099105.9	ENSMUSG00000035268.15	Pkig	chr2	protein_coding	protein kinase inhibitor, gamma
chr2	163503526	163545406	+	163501155	163545406	A5SS	0.2	50	50	ENSMUST00000099105.9	ENSMUSG00000035268.15	Pkig	chr2	protein_coding	protein kinase inhibitor, gamma
chr2	163536076	163545406	+	163501155	163545406	A5SS	0.2	50	50	ENSMUST00000099105.9	ENSMUSG00000035268.15	Pkig	chr2	protein_coding	protein kinase inhibitor, gamma
chr2	163500579	163545406	+	163500579;163501155	163501070;163545406	ES	0.2	50	50	ENSMUST00000152418.8	ENSMUSG00000035268.15	Pkig	chr2	protein_coding	protein kinase inhibitor, gamma
chr2	163500412	163545406	+	163501155	163545406	A5SS&ES	0.2	50	50	ENSMUST00000152418.8	ENSMUSG00000035268.15	Pkig	chr2	protein_coding	protein kinase inhibitor, gamma
chr2	163500412	163563048	+	163545475	163563048	A5SS&ES	0.33	50	50	ENSMUST00000152418.8	ENSMUSG00000035268.15	Pkig	chr2	protein_coding	protein kinase inhibitor, gamma
chr2	163500579	163563048	+	163500579;163545475	163545406;163563048	ES	0.33	50	50	ENSMUST00000126182.8	ENSMUSG00000035268.15	Pkig	chr2	protein_coding	protein kinase inhibitor, gamma
chr2	163503526	163545406	+	163500579	163545406	A5SS	0.2	50	50	ENSMUST00000126182.8	ENSMUSG00000035268.15	Pkig	chr2	protein_coding	protein kinase inhibitor, gamma
chr2	163536076	163545406	+	163500579	163545406	A5SS	0.2	50	50	ENSMUST00000126182.8	ENSMUSG00000035268.15	Pkig	chr2	protein_coding	protein kinase inhibitor, gamma
chr2	163500579	163501070	+	163500579	163563048	A3SS	0.33	50	50	ENSMUST00000131228.8	ENSMUSG00000035268.15	Pkig	chr2	protein_coding	protein kinase inhibitor, gamma
chr2	163536076	163545406	+	163503526	163545406	A5SS	0.2	50	50	ENSMUST00000135537.8	ENSMUSG00000035268.15	Pkig	chr2	protein_coding	protein kinase inhibitor, gamma
chr2	163667277	163670772	+	163667277;163667574	163667398;163670772	ES	0.5	50	50	ENSMUST00000138730.2	ENSMUSG00000027656.8	Ccn5	chr2	protein_coding	cellular communication network factor 5
chr2	163837791	163853522	+	163837285	163853522	A5SS	0.5	50	50	ENSMUST00000018470.10	ENSMUSG00000018326.10	Ywhab	chr2	protein_coding	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
chr2	163889494	163891897	+	163889494;163891544	163891414;163891897	ES	0.33	50	50	ENSMUST00000067715.5	ENSMUSG00000054582.5	Pabpc1l	chr2	protein_coding	poly(A) binding protein, cytoplasmic 1-like
chr2	163890066	163891897	+	163891544	163891897	A5SS&ES	0.33	50	50	ENSMUST00000067715.5	ENSMUSG00000054582.5	Pabpc1l	chr2	protein_coding	poly(A) binding protein, cytoplasmic 1-like
chr2	163890066	163891897	+	163889494	163891897	A5SS	0.33	50	50	ENSMUST00000126272.2	ENSMUSG00000054582.5	Pabpc1l	chr2	protein_coding	poly(A) binding protein, cytoplasmic 1-like
chr2	163896747;163900733	163900586;163902759	-	163896747	163902759	cassetteExon	0.5	100	100	ENSMUST00000132602.2	ENSMUSG00000018322.11	Tomm34	chr2	protein_coding	translocase of outer mitochondrial membrane 34
chr2	163908589	163912833	-	163908589	163912387	A5SS	0.5	50	50	ENSMUST00000018466.4	ENSMUSG00000018322.11	Tomm34	chr2	protein_coding	translocase of outer mitochondrial membrane 34
chr2	163916167	163921433	+	163912362	163921433	A5SS	0.5	50	50	ENSMUST00000134078.8	ENSMUSG00000018209.16	Stk4	chr2	protein_coding	serine/threonine kinase 4
chr2	163923692	163925550	+	163921513	163925550	A5SS	0.5	50	50	ENSMUST00000134078.8	ENSMUSG00000018209.16	Stk4	chr2	protein_coding	serine/threonine kinase 4
chr2	163952208	163959889	+	163942516	163959889	A5SS	0.5	50	50	ENSMUST00000018353.14	ENSMUSG00000018209.16	Stk4	chr2	protein_coding	serine/threonine kinase 4
chr2	164020085	164020656	-	164020085;164020561	164020397;164020656	ES	0.5	50	50	ENSMUST00000045127.12	ENSMUSG00000040154.12	Wfdc5	chr2	protein_coding	WAP four-disulfide core domain 5
chr2	164034911	164036856	+	164032232	164036856	A5SS	0.5	50	50	ENSMUST00000143202.8	ENSMUSG00000085649.8	A730032A03Rik	chr2	lncRNA	RIKEN cDNA A730032A03 gene
chr2	164057502	164063507	-	164057470	164063507	A3SS	0.5	50	50	ENSMUST00000018355.11	ENSMUSG00000018211.14	Wfdc15b	chr2	protein_coding	WAP four-disulfide core domain 15B
chr2	164131281	164131507	+	164131281	164131504	A3SS	0.5	50	50	ENSMUST00000017147.8	ENSMUSG00000017003.8	Svs3a	chr2	protein_coding	seminal vesicle secretory protein 3A
chr2	164175558	164176126	+	164175558	164176144	A3SS	0.5	50	50	ENSMUST00000017148.8	ENSMUSG00000017004.8	Svs5	chr2	protein_coding	seminal vesicle secretory protein 5
chr2	164197532	164197964	-	164197532	164198108	A5SS	0.5	50	50	ENSMUST00000109367.10	ENSMUSG00000017002.15	Slpi	chr2	protein_coding	secretory leukocyte peptidase inhibitor
chr2	164238984	164242448	-	164238984;164239206	164239084;164242448	ES	0.33	50	50	ENSMUST00000109359.8	ENSMUSG00000016995.18	Matn4	chr2	protein_coding	matrilin 4
chr2	164243882	164247018	-	164243882	164246411	5pMXE	0.5	50	50	ENSMUST00000109359.8	ENSMUSG00000016995.18	Matn4	chr2	protein_coding	matrilin 4
chr2	164239206;164241774	164241652;164242448	-	164239206	164242448	cassetteExon	0.5	100	100	ENSMUST00000109359.8	ENSMUSG00000016995.18	Matn4	chr2	protein_coding	matrilin 4
chr2	164241774	164242448	-	164238984	164242448	A3SS	0.33	50	50	ENSMUST00000109358.8	ENSMUSG00000016995.18	Matn4	chr2	protein_coding	matrilin 4
chr2	164250413	164252180	+	164250462	164252180	A5SS	0.5	50	50	ENSMUST00000017151.2	ENSMUSG00000017007.10	Rbpjl	chr2	protein_coding	recombination signal binding protein for immunoglobulin kappa J region-like
chr2	164273233	164285719	-	164273233	164285010	5pMXE	0.5	50	50	ENSMUST00000017153.4	ENSMUSG00000017009.4	Sdc4	chr2	protein_coding	syndecan 4
chr2	164298949;164300017	164299889;164302683	+	164298949	164302683	cassetteExon	0.5	100	100	ENSMUST00000142347.2	ENSMUSG00000045503.17	Sys1	chr2	protein_coding	SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
chr2	164305288	164309068	+	164305288	164306278	3pMXE	0.25	50	50	ENSMUST00000109352.8	ENSMUSG00000045503.17	Sys1	chr2	protein_coding	SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
chr2	164305288	164314058	+	164305288	164306278	3pMXE	0.25	50	50	ENSMUST00000109352.8	ENSMUSG00000045503.17	Sys1	chr2	protein_coding	SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
chr2	164305288	164330162	+	164305288	164306278	3pMXE	0.25	50	50	ENSMUST00000109352.8	ENSMUSG00000045503.17	Sys1	chr2	protein_coding	SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
chr2	164299042	164299889	+	164298949	164299889	A5SS	0.5	50	50	ENSMUST00000109352.8	ENSMUSG00000045503.17	Sys1	chr2	protein_coding	SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
chr2	164305288	164314058	+	164305288;164309247	164309068;164314058	ES	0.5	50	50	ENSMUST00000138268.8	ENSMUSG00000045503.17	Sys1	chr2	protein_coding	SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
chr2	164314242	164321476	+	164314242	164315561	3pMXE	0.5	50	50	ENSMUST00000138268.8	ENSMUSG00000045503.17	Sys1	chr2	protein_coding	SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
chr2	164305288	164314058	+	164305288;164309247	164306278;164314058	ES	0.5	50	50	ENSMUST00000125086.2	ENSMUSG00000045503.17	Sys1	chr2	protein_coding	SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
chr2	164305288	164309068	+	164305288	164330162	A3SS	0.25	50	50	ENSMUST00000164863.2	ENSMUSG00000090996.2	Gm20458	chr2	protein_coding	predicted gene 20458
chr2	164305288	164314058	+	164305288	164330162	A3SS	0.25	50	50	ENSMUST00000164863.2	ENSMUSG00000090996.2	Gm20458	chr2	protein_coding	predicted gene 20458
chr2	164328163	164330162	+	164305288	164330162	A5SS	0.25	50	50	ENSMUST00000164863.2	ENSMUSG00000090996.2	Gm20458	chr2	protein_coding	predicted gene 20458
chr2	164328607	164330162	+	164305288	164330162	A5SS	0.25	50	50	ENSMUST00000164863.2	ENSMUSG00000090996.2	Gm20458	chr2	protein_coding	predicted gene 20458
chr2	164328924	164330162	+	164305288	164330162	A5SS	0.25	50	50	ENSMUST00000164863.2	ENSMUSG00000090996.2	Gm20458	chr2	protein_coding	predicted gene 20458
chr2	164328607	164330162	+	164328163	164330162	A5SS	0.25	50	50	ENSMUST00000109350.9	ENSMUSG00000017734.16	Dbndd2	chr2	protein_coding	dysbindin (dystrobrevin binding protein 1) domain containing 2
chr2	164328924	164330162	+	164328163	164330162	A5SS	0.25	50	50	ENSMUST00000109350.9	ENSMUSG00000017734.16	Dbndd2	chr2	protein_coding	dysbindin (dystrobrevin binding protein 1) domain containing 2
chr2	164328607;164328924	164328847;164330162	+	164328607	164330162	cassetteExon	0.5	100	100	ENSMUST00000149287.8	ENSMUSG00000017734.16	Dbndd2	chr2	protein_coding	dysbindin (dystrobrevin binding protein 1) domain containing 2
chr2	164328607	164330162	+	164328924	164330162	5pMXE	0.25	50	50	ENSMUST00000109349.9	ENSMUSG00000017734.16	Dbndd2	chr2	protein_coding	dysbindin (dystrobrevin binding protein 1) domain containing 2
chr2	164339963;164340499	164340410;164341715	+	164339963	164341715	cassetteExon	0.5	100	100	ENSMUST00000103101.11	ENSMUSG00000017721.16	Pigt	chr2	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class T
chr2	164404724	164407712	+	164404724	164405228	3pMXE	0.5	50	50	ENSMUST00000146270.2	ENSMUSG00000017723.12	Wfdc2	chr2	protein_coding	WAP four-disulfide core domain 2
chr2	164405068	164405228	+	164404724	164405228	A5SS	0.5	50	50	ENSMUST00000146270.2	ENSMUSG00000017723.12	Wfdc2	chr2	protein_coding	WAP four-disulfide core domain 2
chr2	164405371	164407712	+	164405371;164406132	164405977;164407712	ES	0.33	50	50	ENSMUST00000017867.10	ENSMUSG00000017723.12	Wfdc2	chr2	protein_coding	WAP four-disulfide core domain 2
chr2	164404724;164405371	164405228;164407712	+	164404724	164407712	cassetteExon	0.5	100	100	ENSMUST00000109344.9	ENSMUSG00000017723.12	Wfdc2	chr2	protein_coding	WAP four-disulfide core domain 2
chr2	164406132	164407712	+	164404724	164407712	A5SS	0.33	50	50	ENSMUST00000109344.9	ENSMUSG00000017723.12	Wfdc2	chr2	protein_coding	WAP four-disulfide core domain 2
chr2	164405371	164407712	+	164405371	164405977	3pMXE	0.5	50	50	ENSMUST00000125051.2	ENSMUSG00000017723.12	Wfdc2	chr2	protein_coding	WAP four-disulfide core domain 2
chr2	164439698;164441059	164440917;164441869	-	164439698	164441869	cassetteExon	0.5	100	100	ENSMUST00000094351.11	ENSMUSG00000070533.12	Wfdc8	chr2	protein_coding	WAP four-disulfide core domain 8
chr2	164451016	164454276	-	164451016	164455345	A5SS	0.5	50	50	ENSMUST00000094351.11	ENSMUSG00000070533.12	Wfdc8	chr2	protein_coding	WAP four-disulfide core domain 8
chr2	164576231	164587753	-	164576231	164584949	5pMXE	0.5	50	50	ENSMUST00000103096.10	ENSMUSG00000076434.10	Wfdc3	chr2	protein_coding	WAP four-disulfide core domain 3
chr2	164587004	164587753	-	164576231	164587753	A3SS	0.5	50	50	ENSMUST00000109328.8	ENSMUSG00000076434.10	Wfdc3	chr2	protein_coding	WAP four-disulfide core domain 3
chr2	164589479	164593152	+	164589479	164596030	A3SS	0.5	50	50	ENSMUST00000017443.14	ENSMUSG00000017299.14	Dnttip1	chr2	protein_coding	deoxynucleotidyltransferase, terminal, interacting protein 1
chr2	164601217	164603448	+	164601217	164604989	A3SS	0.5	50	50	ENSMUST00000017443.14	ENSMUSG00000017299.14	Dnttip1	chr2	protein_coding	deoxynucleotidyltransferase, terminal, interacting protein 1
chr2	164601260	164609633	-	164601260;164604528	164604464;164609633	ES	0.33	50	50	ENSMUST00000124435.8	ENSMUSG00000086453.8	Gm11457	chr2	lncRNA	predicted gene 11457
chr2	164604528;164604801	164604641;164609633	-	164604528	164609633	cassetteExon	0.5	100	100	ENSMUST00000124435.8	ENSMUSG00000086453.8	Gm11457	chr2	lncRNA	predicted gene 11457
chr2	164609870	164611491	-	164609833	164611491	A3SS	0.5	50	50	ENSMUST00000124435.8	ENSMUSG00000086453.8	Gm11457	chr2	lncRNA	predicted gene 11457
chr2	164601260;164604801	164604464;164609633	-	164601260	164609633	cassetteExon	0.5	100	100	ENSMUST00000141843.8	ENSMUSG00000086453.8	Gm11457	chr2	lncRNA	predicted gene 11457
chr2	164614146	164619110	+	164614146	164614424	3pMXE	0.5	50	50	ENSMUST00000088248.13	ENSMUSG00000001403.14	Ube2c	chr2	protein_coding	ubiquitin-conjugating enzyme E2C
chr2	164620147	164621788	-	164620147	164621583	5pMXE	0.5	50	50	ENSMUST00000103095.5	ENSMUSG00000017300.10	Tnnc2	chr2	protein_coding	troponin C2, fast
chr2	164628775	164633633	+	164628775;164633488	164633478;164633633	ES	0.33	50	50	ENSMUST00000174070.8	ENSMUSG00000050373.14	Snx21	chr2	protein_coding	sorting nexin family member 21
chr2	164628775	164634224	+	164628775	164633478	A3SS&ES	0.33	50	50	ENSMUST00000174070.8	ENSMUSG00000050373.14	Snx21	chr2	protein_coding	sorting nexin family member 21
chr2	164628768	164633633	+	164633488	164633633	A5SS&ES	0.33	50	50	ENSMUST00000174070.8	ENSMUSG00000050373.14	Snx21	chr2	protein_coding	sorting nexin family member 21
chr2	164628775	164633633	+	164628768	164633633	A5SS	0.33	50	50	ENSMUST00000172577.8	ENSMUSG00000050373.14	Snx21	chr2	protein_coding	sorting nexin family member 21
chr2	164628775	164634224	+	164628775	164633633	A3SS	0.33	50	50	ENSMUST00000056181.7	ENSMUSG00000050373.14	Snx21	chr2	protein_coding	sorting nexin family member 21
chr2	164628775	164633633	+	164633488	164633633	5pMXE	0.33	50	50	ENSMUST00000173945.2	ENSMUSG00000050373.14	Snx21	chr2	protein_coding	sorting nexin family member 21
chr2	164641865;164645053	164644917;164646610	-	164641865	164646610	cassetteExon	0.5	100	100	ENSMUST00000134611.4	ENSMUSG00000017307.17	Acot8	chr2	protein_coding	acyl-CoA thioesterase 8
chr2	164634930	164637002	-	164634930	164636905	A5SS	0.5	50	50	ENSMUST00000134611.4	ENSMUSG00000017307.17	Acot8	chr2	protein_coding	acyl-CoA thioesterase 8
chr2	164665120;164666279	164666204;164666602	+	164665120	164666602	cassetteExon	0.5	100	100	ENSMUST00000017908.3	ENSMUSG00000017764.3	Zswim1	chr2	protein_coding	zinc finger SWIM-type containing 1
chr2	164669954	164670325	-	164668974	164670325	A3SS	0.5	50	50	ENSMUST00000141411.2	ENSMUSG00000017767.4	Spata25	chr2	protein_coding	spermatogenesis associated 25
chr2	164676844	164677550	+	164676844;164677231	164677076;164677550	ES	0.5	50	50	ENSMUST00000103093.10	ENSMUSG00000017760.17	Ctsa	chr2	protein_coding	cathepsin A
chr2	164675116;164675770	164675529;164675950	+	164675116	164675950	cassetteExon	0.5	100	100	ENSMUST00000103093.10	ENSMUSG00000017760.17	Ctsa	chr2	protein_coding	cathepsin A
chr2	164675116;164675912	164675529;164676240	+	164675116;164676128	164675950;164676240	MXE	0.5	100	100	ENSMUST00000103093.10	ENSMUSG00000017760.17	Ctsa	chr2	protein_coding	cathepsin A
chr2	164675116;164675770	164675612;164675950	+	164675116	164675950	cassetteExon	0.5	100	100	ENSMUST00000103093.10	ENSMUSG00000017760.17	Ctsa	chr2	protein_coding	cathepsin A
chr2	164675116;164675912	164675612;164676240	+	164675116;164676128	164675950;164676240	MXE	0.5	100	100	ENSMUST00000103093.10	ENSMUSG00000017760.17	Ctsa	chr2	protein_coding	cathepsin A
chr2	164675116;164675770	164675644;164675950	+	164675116	164675950	cassetteExon	0.5	100	100	ENSMUST00000103093.10	ENSMUSG00000017760.17	Ctsa	chr2	protein_coding	cathepsin A
chr2	164675116;164675912	164675644;164676240	+	164675116;164676128	164675950;164676240	MXE	0.5	100	100	ENSMUST00000103093.10	ENSMUSG00000017760.17	Ctsa	chr2	protein_coding	cathepsin A
chr2	164675116;164675770	164675693;164675950	+	164675116	164675950	cassetteExon	0.5	100	100	ENSMUST00000103093.10	ENSMUSG00000017760.17	Ctsa	chr2	protein_coding	cathepsin A
chr2	164675116;164675912	164675693;164676240	+	164675116;164676128	164675950;164676240	MXE	0.5	100	100	ENSMUST00000103093.10	ENSMUSG00000017760.17	Ctsa	chr2	protein_coding	cathepsin A
chr2	164675116;164675770	164675728;164675950	+	164675116	164675950	cassetteExon	0.5	100	100	ENSMUST00000103093.10	ENSMUSG00000017760.17	Ctsa	chr2	protein_coding	cathepsin A
chr2	164675116;164675912	164675728;164676240	+	164675116;164676128	164675950;164676240	MXE	0.5	100	100	ENSMUST00000103093.10	ENSMUSG00000017760.17	Ctsa	chr2	protein_coding	cathepsin A
chr2	164676682	164676758	+	164676668	164676758	A5SS	0.5	50	50	ENSMUST00000103093.10	ENSMUSG00000017760.17	Ctsa	chr2	protein_coding	cathepsin A
chr2	164675116	164675693	+	164675116	164675612	3pMXE	0.16	50	50	ENSMUST00000133502.2	ENSMUSG00000017760.17	Ctsa	chr2	protein_coding	cathepsin A
chr2	164675116	164675728	+	164675116	164675612	3pMXE	0.16	50	50	ENSMUST00000133502.2	ENSMUSG00000017760.17	Ctsa	chr2	protein_coding	cathepsin A
chr2	164675116	164675950	+	164675116	164675612	3pMXE	0.16	50	50	ENSMUST00000133502.2	ENSMUSG00000017760.17	Ctsa	chr2	protein_coding	cathepsin A
chr2	164675116	164675529	+	164675116	164675612	A3SS	0.16	50	50	ENSMUST00000133502.2	ENSMUSG00000017760.17	Ctsa	chr2	protein_coding	cathepsin A
chr2	164675116	164675644	+	164675116	164675612	A3SS	0.16	50	50	ENSMUST00000133502.2	ENSMUSG00000017760.17	Ctsa	chr2	protein_coding	cathepsin A
chr2	164675116	164675529	+	164675116	164675644	A3SS	0.16	50	50	ENSMUST00000103092.9	ENSMUSG00000017760.17	Ctsa	chr2	protein_coding	cathepsin A
chr2	164675116	164675693	+	164675116	164675644	A3SS	0.16	50	50	ENSMUST00000103092.9	ENSMUSG00000017760.17	Ctsa	chr2	protein_coding	cathepsin A
chr2	164675116	164675728	+	164675116	164675644	A3SS	0.16	50	50	ENSMUST00000103092.9	ENSMUSG00000017760.17	Ctsa	chr2	protein_coding	cathepsin A
chr2	164675912	164676240	+	164676128	164676240	A5SS&ES	0.5	50	50	ENSMUST00000103092.9	ENSMUSG00000017760.17	Ctsa	chr2	protein_coding	cathepsin A
chr2	164675116	164675529	+	164675116	164675693	A3SS	0.16	50	50	ENSMUST00000151493.3	ENSMUSG00000017760.17	Ctsa	chr2	protein_coding	cathepsin A
chr2	164675116	164675728	+	164675116	164675693	A3SS	0.16	50	50	ENSMUST00000151493.3	ENSMUSG00000017760.17	Ctsa	chr2	protein_coding	cathepsin A
chr2	164675116	164675728	+	164675116	164675529	3pMXE	0.16	50	50	ENSMUST00000147883.8	ENSMUSG00000017760.17	Ctsa	chr2	protein_coding	cathepsin A
chr2	164675116	164675950	+	164675116	164675529	3pMXE	0.16	50	50	ENSMUST00000147883.8	ENSMUSG00000017760.17	Ctsa	chr2	protein_coding	cathepsin A
chr2	164675116	164675950	+	164675770	164675950	5pMXE	0.5	50	50	ENSMUST00000146525.2	ENSMUSG00000017760.17	Ctsa	chr2	protein_coding	cathepsin A
chr2	164676844	164677550	+	164676844	164677076	3pMXE	0.5	50	50	ENSMUST00000130959.8	ENSMUSG00000017760.17	Ctsa	chr2	protein_coding	cathepsin A
chr2	164694600	164696847	-	164694600;164696341	164696186;164696847	ES	0.5	50	50	ENSMUST00000109316.8	ENSMUSG00000017754.14	Pltp	chr2	protein_coding	phospholipid transfer protein
chr2	164696341	164698624	-	164696341;164696975	164696847;164698624	ES	0.33	50	50	ENSMUST00000109316.8	ENSMUSG00000017754.14	Pltp	chr2	protein_coding	phospholipid transfer protein
chr2	164696975;164697334	164697248;164698624	-	164696975	164698624	cassetteExon	0.5	100	100	ENSMUST00000109316.8	ENSMUSG00000017754.14	Pltp	chr2	protein_coding	phospholipid transfer protein
chr2	164698723	164698867	-	164698723	164698807	A5SS	0.5	50	50	ENSMUST00000109316.8	ENSMUSG00000017754.14	Pltp	chr2	protein_coding	phospholipid transfer protein
chr2	164694600;164696341	164696186;164698624	-	164694600;164696975	164696847;164698624	MXE	0.5	100	100	ENSMUST00000109317.10	ENSMUSG00000017754.14	Pltp	chr2	protein_coding	phospholipid transfer protein
chr2	164698917	164699465	-	164698917	164699504	A5SS	0.5	50	50	ENSMUST00000109317.10	ENSMUSG00000017754.14	Pltp	chr2	protein_coding	phospholipid transfer protein
chr2	164694600;164697334	164696847;164698624	-	164694600;164696341	164696186;164698624	MXE	0.5	100	100	ENSMUST00000142603.8	ENSMUSG00000017754.14	Pltp	chr2	protein_coding	phospholipid transfer protein
chr2	164696341;164697334	164696847;164698624	-	164696341	164698624	cassetteExon	0.5	100	100	ENSMUST00000142603.8	ENSMUSG00000017754.14	Pltp	chr2	protein_coding	phospholipid transfer protein
chr2	164694600	164696847	-	164696341	164696847	3pMXE	0.5	50	50	ENSMUST00000128110.2	ENSMUSG00000017754.14	Pltp	chr2	protein_coding	phospholipid transfer protein
chr2	164722018	164724695	+	164721409	164724695	A5SS	0.5	50	50	ENSMUST00000145327.2	ENSMUSG00000039849.7	Pcif1	chr2	protein_coding	phosphorylated CTD interacting factor 1
chr2	164741951	164742198	-	164741951;164742107	164742031;164742198	ES	0.5	50	50	ENSMUST00000041361.14	ENSMUSG00000039834.18	Zfp335	chr2	protein_coding	zinc finger protein 335
chr2	164746907;164748415	164748260;164749348	-	164746907	164749348	cassetteExon	0.5	100	100	ENSMUST00000041361.14	ENSMUSG00000039834.18	Zfp335	chr2	protein_coding	zinc finger protein 335
chr2	164756155	164761144	+	164753670	164761144	A5SS	0.5	50	50	ENSMUST00000129364.2	ENSMUSG00000085436.2	Zfp335os	chr2	lncRNA	zinc finger protein 335, opposite strand
chr2	164796352	164796693	+	164795542	164796693	A5SS	0.5	50	50	ENSMUST00000017881.3	ENSMUSG00000017737.3	Mmp9	chr2	protein_coding	matrix metallopeptidase 9
chr2	164802923	164815607	+	164802923;164815481	164815396;164815607	ES	0.33	50	50	ENSMUST00000124372.6	ENSMUSG00000017740.18	Slc12a5	chr2	protein_coding	solute carrier family 12, member 5
chr2	164802923	164804320	+	164802923	164815396	A3SS	0.33	50	50	ENSMUST00000124372.6	ENSMUSG00000017740.18	Slc12a5	chr2	protein_coding	solute carrier family 12, member 5
chr2	164815701	164816336	+	164815701	164816368	A3SS	0.5	50	50	ENSMUST00000124372.6	ENSMUSG00000017740.18	Slc12a5	chr2	protein_coding	solute carrier family 12, member 5
chr2	164810374	164815607	+	164815481	164815607	A5SS&ES	0.33	50	50	ENSMUST00000124372.6	ENSMUSG00000017740.18	Slc12a5	chr2	protein_coding	solute carrier family 12, member 5
chr2	164838438	164839030	+	164838438;164838798	164838784;164839030	ES	0.5	50	50	ENSMUST00000202623.4	ENSMUSG00000017740.18	Slc12a5	chr2	protein_coding	solute carrier family 12, member 5
chr2	164802923	164804320	+	164802923	164815607	A3SS	0.33	50	50	ENSMUST00000202623.4	ENSMUSG00000017740.18	Slc12a5	chr2	protein_coding	solute carrier family 12, member 5
chr2	164810374	164815607	+	164802923	164815607	A5SS	0.33	50	50	ENSMUST00000202623.4	ENSMUSG00000017740.18	Slc12a5	chr2	protein_coding	solute carrier family 12, member 5
chr2	164818380	164829031	+	164828699	164829031	A5SS&ES	0.5	50	50	ENSMUST00000202623.4	ENSMUSG00000017740.18	Slc12a5	chr2	protein_coding	solute carrier family 12, member 5
chr2	164818380	164829031	+	164818380	164841119	A3SS	0.5	50	50	ENSMUST00000202479.4	ENSMUSG00000017740.18	Slc12a5	chr2	protein_coding	solute carrier family 12, member 5
chr2	164851369	164854756	-	164851369;164852507	164852371;164854756	ES	0.5	50	50	ENSMUST00000040381.15	ENSMUSG00000039804.16	Ncoa5	chr2	protein_coding	nuclear receptor coactivator 5
chr2	164855082	164876603	-	164855082;164865132	164865066;164876603	ES	0.33	50	50	ENSMUST00000040381.15	ENSMUSG00000039804.16	Ncoa5	chr2	protein_coding	nuclear receptor coactivator 5
chr2	164864961	164865066	-	164855082	164865066	A3SS	0.5	50	50	ENSMUST00000040381.15	ENSMUSG00000039804.16	Ncoa5	chr2	protein_coding	nuclear receptor coactivator 5
chr2	164865121	164876603	-	164865132	164876603	A3SS	0.33	50	50	ENSMUST00000040381.15	ENSMUSG00000039804.16	Ncoa5	chr2	protein_coding	nuclear receptor coactivator 5
chr2	164844091	164844536	-	164844091	164844559	A5SS	0.5	50	50	ENSMUST00000040381.15	ENSMUSG00000039804.16	Ncoa5	chr2	protein_coding	nuclear receptor coactivator 5
chr2	164844879	164846009	-	164844879	164846017	A5SS	0.5	50	50	ENSMUST00000040381.15	ENSMUSG00000039804.16	Ncoa5	chr2	protein_coding	nuclear receptor coactivator 5
chr2	164855082;164865121	164865066;164876603	-	164855082	164876603	cassetteExon	0.5	100	100	ENSMUST00000121377.8	ENSMUSG00000039804.16	Ncoa5	chr2	protein_coding	nuclear receptor coactivator 5
chr2	164851369	164854756	-	164852507	164854756	3pMXE	0.5	50	50	ENSMUST00000127545.2	ENSMUSG00000039804.16	Ncoa5	chr2	protein_coding	nuclear receptor coactivator 5
chr2	164855082	164876603	-	164865132	164876603	3pMXE	0.33	50	50	ENSMUST00000141663.2	ENSMUSG00000039804.16	Ncoa5	chr2	protein_coding	nuclear receptor coactivator 5
chr2	164897678	164898626	+	164897678	164904132	A3SS	0.33	50	50	ENSMUST00000154443.8	ENSMUSG00000017652.17	Cd40	chr2	protein_coding	CD40 antigen
chr2	164897678	164904206	+	164897678	164904132	A3SS	0.33	50	50	ENSMUST00000154443.8	ENSMUSG00000017652.17	Cd40	chr2	protein_coding	CD40 antigen
chr2	164905481	164911549	+	164905481;164908484	164908423;164911549	ES	0.5	50	50	ENSMUST00000017799.12	ENSMUSG00000017652.17	Cd40	chr2	protein_coding	CD40 antigen
chr2	164908484	164911737	+	164908484;164911635	164911549;164911737	ES	0.5	50	50	ENSMUST00000017799.12	ENSMUSG00000017652.17	Cd40	chr2	protein_coding	CD40 antigen
chr2	164897678;164898739	164898626;164904206	+	164897678	164904206	cassetteExon	0.5	100	100	ENSMUST00000017799.12	ENSMUSG00000017652.17	Cd40	chr2	protein_coding	CD40 antigen
chr2	164905481;164911635	164911549;164911737	+	164905481;164908484	164908423;164911737	MXE	0.5	100	100	ENSMUST00000073707.9	ENSMUSG00000017652.17	Cd40	chr2	protein_coding	CD40 antigen
chr2	164908484	164911737	+	164908484	164911549	A3SS	0.5	50	50	ENSMUST00000184221.2	ENSMUSG00000017652.17	Cd40	chr2	protein_coding	CD40 antigen
chr2	164905481	164911549	+	164905481	164908423	3pMXE	0.5	50	50	ENSMUST00000153105.2	ENSMUSG00000017652.17	Cd40	chr2	protein_coding	CD40 antigen
chr2	164977240	164984036	-	164977240	164983974	A5SS	0.5	50	50	ENSMUST00000065438.13	ENSMUSG00000053166.15	Cdh22	chr2	protein_coding	cadherin 22
chr2	165122874	165124001	-	165122874;165123300	165123228;165124001	ES	0.33	50	50	ENSMUST00000109299.8	ENSMUSG00000017664.17	Slc35c2	chr2	protein_coding	solute carrier family 35, member C2
chr2	165125455	165129704	-	165125455	165129604	5pMXE	0.33	50	50	ENSMUST00000109299.8	ENSMUSG00000017664.17	Slc35c2	chr2	protein_coding	solute carrier family 35, member C2
chr2	165122811	165123228	-	165122874	165123228	A3SS	0.5	50	50	ENSMUST00000109299.8	ENSMUSG00000017664.17	Slc35c2	chr2	protein_coding	solute carrier family 35, member C2
chr2	165122811	165124001	-	165123300	165124001	A3SS&ES	0.33	50	50	ENSMUST00000109299.8	ENSMUSG00000017664.17	Slc35c2	chr2	protein_coding	solute carrier family 35, member C2
chr2	165124782	165125169	-	165124853	165125169	A3SS	0.5	50	50	ENSMUST00000109299.8	ENSMUSG00000017664.17	Slc35c2	chr2	protein_coding	solute carrier family 35, member C2
chr2	165125520	165129604	-	165125455	165129604	A3SS	0.5	50	50	ENSMUST00000109299.8	ENSMUSG00000017664.17	Slc35c2	chr2	protein_coding	solute carrier family 35, member C2
chr2	165125455	165128401	-	165125455	165129604	A5SS	0.33	50	50	ENSMUST00000109299.8	ENSMUSG00000017664.17	Slc35c2	chr2	protein_coding	solute carrier family 35, member C2
chr2	165125520	165129704	-	165125520	165129604	5pMXE	0.5	50	50	ENSMUST00000109298.8	ENSMUSG00000017664.17	Slc35c2	chr2	protein_coding	solute carrier family 35, member C2
chr2	165125455	165129704	-	165125523	165129704	A3SS	0.33	50	50	ENSMUST00000132270.8	ENSMUSG00000017664.17	Slc35c2	chr2	protein_coding	solute carrier family 35, member C2
chr2	165125520	165129704	-	165125523	165129704	A3SS	0.33	50	50	ENSMUST00000132270.8	ENSMUSG00000017664.17	Slc35c2	chr2	protein_coding	solute carrier family 35, member C2
chr2	165125455	165129704	-	165125520	165129704	A3SS	0.33	50	50	ENSMUST00000017808.14	ENSMUSG00000017664.17	Slc35c2	chr2	protein_coding	solute carrier family 35, member C2
chr2	165122811;165123300	165123228;165124001	-	165122811	165124001	cassetteExon	0.5	100	100	ENSMUST00000129336.8	ENSMUSG00000017664.17	Slc35c2	chr2	protein_coding	solute carrier family 35, member C2
chr2	165122874	165124001	-	165122811	165124001	A3SS	0.33	50	50	ENSMUST00000129336.8	ENSMUSG00000017664.17	Slc35c2	chr2	protein_coding	solute carrier family 35, member C2
chr2	165122874	165124001	-	165123300	165124001	A3SS&ES	0.33	50	50	ENSMUST00000145301.8	ENSMUSG00000017664.17	Slc35c2	chr2	protein_coding	solute carrier family 35, member C2
chr2	165125455	165128401	-	165125455	165129704	A5SS	0.33	50	50	ENSMUST00000156134.8	ENSMUSG00000017664.17	Slc35c2	chr2	protein_coding	solute carrier family 35, member C2
chr2	165156701	165157918	-	165156701;165157596	165157524;165157918	ES	0.5	50	50	ENSMUST00000103091.9	ENSMUSG00000017670.17	Elmo2	chr2	protein_coding	engulfment and cell motility 2
chr2	165158271	165167787	-	165158271	165162580	5pMXE	0.25	50	50	ENSMUST00000103091.9	ENSMUSG00000017670.17	Elmo2	chr2	protein_coding	engulfment and cell motility 2
chr2	165158271	165168338	-	165158271	165162580	5pMXE	0.25	50	50	ENSMUST00000103091.9	ENSMUSG00000017670.17	Elmo2	chr2	protein_coding	engulfment and cell motility 2
chr2	165143911;165145621	165145586;165146820	-	165143911	165146820	cassetteExon	0.5	100	100	ENSMUST00000103091.9	ENSMUSG00000017670.17	Elmo2	chr2	protein_coding	engulfment and cell motility 2
chr2	165136231	165136934	-	165136243	165136934	A3SS	0.5	50	50	ENSMUST00000103091.9	ENSMUSG00000017670.17	Elmo2	chr2	protein_coding	engulfment and cell motility 2
chr2	165152188	165153543	-	165152194	165153543	A3SS	0.5	50	50	ENSMUST00000103091.9	ENSMUSG00000017670.17	Elmo2	chr2	protein_coding	engulfment and cell motility 2
chr2	165153724	165156184	-	165153724	165156651	A5SS	0.5	50	50	ENSMUST00000103091.9	ENSMUSG00000017670.17	Elmo2	chr2	protein_coding	engulfment and cell motility 2
chr2	165158271	165158562	-	165158271	165162580	A5SS	0.25	50	50	ENSMUST00000103091.9	ENSMUSG00000017670.17	Elmo2	chr2	protein_coding	engulfment and cell motility 2
chr2	165158271;165167917	165167787;165168338	-	165158271	165168338	cassetteExon	0.5	100	100	ENSMUST00000074046.13	ENSMUSG00000017670.17	Elmo2	chr2	protein_coding	engulfment and cell motility 2
chr2	165158271	165158562	-	165158271	165168338	A5SS	0.25	50	50	ENSMUST00000074046.13	ENSMUSG00000017670.17	Elmo2	chr2	protein_coding	engulfment and cell motility 2
chr2	165158271	165167787	-	165158271	165158562	5pMXE	0.25	50	50	ENSMUST00000071699.11	ENSMUSG00000017670.17	Elmo2	chr2	protein_coding	engulfment and cell motility 2
chr2	165156701	165157918	-	165157596	165157918	3pMXE	0.5	50	50	ENSMUST00000128690.2	ENSMUSG00000017670.17	Elmo2	chr2	protein_coding	engulfment and cell motility 2
chr2	165202008	165203869	-	165202038	165203869	A3SS	0.5	50	50	ENSMUST00000103085.8	ENSMUSG00000056824.16	Zfp663	chr2	protein_coding	zinc finger protein 663
chr2	165269053	165275957	-	165269053;165272253	165272128;165275957	ES	0.5	50	50	ENSMUST00000029208.15	ENSMUSG00000018459.16	Slc13a3	chr2	protein_coding	solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3
chr2	165333869	165334967	-	165333631	165334967	A3SS	0.5	50	50	ENSMUST00000039007.7	ENSMUSG00000039725.7	Trp53rka	chr2	protein_coding	transformation related protein 53 regulating kinase A
chr2	165350726	165356346	+	165345968	165356346	A5SS	0.5	50	50	ENSMUST00000029196.5	ENSMUSG00000027661.5	Slc2a10	chr2	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 10
chr2	165573556	165603824	+	165573556;165596450	165596361;165603824	ES	0.5	50	50	ENSMUST00000088132.13	ENSMUSG00000017897.19	Eya2	chr2	protein_coding	EYA transcriptional coactivator and phosphatase 2
chr2	165506806;165507323	165507177;165524757	+	165506806	165524757	cassetteExon	0.5	100	100	ENSMUST00000088132.13	ENSMUSG00000017897.19	Eya2	chr2	protein_coding	EYA transcriptional coactivator and phosphatase 2
chr2	165555492	165557867	+	165555492	165557871	A3SS	0.5	50	50	ENSMUST00000088132.13	ENSMUSG00000017897.19	Eya2	chr2	protein_coding	EYA transcriptional coactivator and phosphatase 2
chr2	165497455	165506706	+	165437184	165506706	A5SS	0.5	50	50	ENSMUST00000088132.13	ENSMUSG00000017897.19	Eya2	chr2	protein_coding	EYA transcriptional coactivator and phosphatase 2
chr2	165627658	165633825	-	165627658;165629167	165629084;165633825	ES	0.5	50	50	ENSMUST00000109266.11	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165694068	165703805	-	165694068	165699975	5pMXE	0.25	50	50	ENSMUST00000109266.11	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165694068	165717625	-	165694068	165699975	5pMXE	0.25	50	50	ENSMUST00000109266.11	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165688084	165693920	-	165688159	165693920	A3SS	0.5	50	50	ENSMUST00000109266.11	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165633891	165634732	-	165633891	165634724	A5SS	0.5	50	50	ENSMUST00000109266.11	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165647297	165649439	-	165647297	165649595	A5SS	0.5	50	50	ENSMUST00000109266.11	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165694068	165694788	-	165694068	165699975	A5SS	0.25	50	50	ENSMUST00000109266.11	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165738773	-	165717695	165726528	5pMXE	0.11	50	50	ENSMUST00000177633.8	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165740836	-	165717695	165726528	5pMXE	0.11	50	50	ENSMUST00000177633.8	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165694068;165694799	165694788;165717625	-	165694068	165717625	cassetteExon	0.5	100	100	ENSMUST00000177633.8	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695;165725318	165725248;165726528	-	165717695	165726528	cassetteExon	0.5	100	100	ENSMUST00000177633.8	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165715143	165717625	-	165694068	165717625	A3SS	0.33	50	50	ENSMUST00000177633.8	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165694068	165703805	-	165694068	165717625	A5SS	0.25	50	50	ENSMUST00000177633.8	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165718007	-	165717695	165726528	A5SS	0.11	50	50	ENSMUST00000177633.8	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165718205	-	165717695	165726528	A5SS	0.11	50	50	ENSMUST00000177633.8	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165721494	-	165717695	165726528	A5SS	0.11	50	50	ENSMUST00000177633.8	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165724069	-	165717695	165726528	A5SS	0.11	50	50	ENSMUST00000177633.8	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165726099	-	165717695	165726528	A5SS	0.11	50	50	ENSMUST00000177633.8	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165725248	-	165717695	165724069	5pMXE	0.11	50	50	ENSMUST00000099084.9	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165726099	-	165717695	165724069	5pMXE	0.11	50	50	ENSMUST00000099084.9	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165738773	-	165717695	165724069	5pMXE	0.11	50	50	ENSMUST00000099084.9	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165740836	-	165717695	165724069	5pMXE	0.11	50	50	ENSMUST00000099084.9	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165718007	-	165717695	165724069	A5SS	0.11	50	50	ENSMUST00000099084.9	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165718205	-	165717695	165724069	A5SS	0.11	50	50	ENSMUST00000099084.9	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165721494	-	165717695	165724069	A5SS	0.11	50	50	ENSMUST00000099084.9	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165718007	-	165717695	165725248	A5SS	0.14	50	50	ENSMUST00000018050.14	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165718205	-	165717695	165725248	A5SS	0.14	50	50	ENSMUST00000018050.14	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165721494	-	165717695	165725248	A5SS	0.14	50	50	ENSMUST00000018050.14	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165726099	-	165717695	165725248	A5SS&ES	0.14	50	50	ENSMUST00000018050.14	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165721494	-	165717695	165718205	5pMXE	0.11	50	50	ENSMUST00000109269.8	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165726099	-	165717695	165718205	5pMXE	0.11	50	50	ENSMUST00000109269.8	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165738773	-	165717695	165718205	5pMXE	0.11	50	50	ENSMUST00000109269.8	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165740836	-	165717695	165718205	5pMXE	0.11	50	50	ENSMUST00000109269.8	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165715143	165717625	-	165694799	165717625	A3SS	0.33	50	50	ENSMUST00000109269.8	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165694068	165703805	-	165694068	165694788	A5SS&ES	0.25	50	50	ENSMUST00000109269.8	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165718007	-	165717695	165718205	A5SS	0.11	50	50	ENSMUST00000109269.8	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165670609	165675229	-	165670609	165675228	A5SS	0.5	50	50	ENSMUST00000152682.8	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165740836	-	165717695	165738773	5pMXE	0.11	50	50	ENSMUST00000109262.8	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165718007	-	165717695	165738773	A5SS	0.11	50	50	ENSMUST00000109262.8	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165721494	-	165717695	165738773	A5SS	0.11	50	50	ENSMUST00000109262.8	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165725248	-	165717695	165738773	A5SS	0.11	50	50	ENSMUST00000109262.8	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165726099	-	165717695	165738773	A5SS	0.11	50	50	ENSMUST00000109262.8	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165718007	-	165717695	165740836	A5SS	0.11	50	50	ENSMUST00000136842.2	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165721494	-	165717695	165740836	A5SS	0.11	50	50	ENSMUST00000136842.2	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165725248	-	165717695	165740836	A5SS	0.11	50	50	ENSMUST00000136842.2	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165726099	-	165717695	165740836	A5SS	0.11	50	50	ENSMUST00000136842.2	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165726099	-	165717695	165721494	5pMXE	0.11	50	50	ENSMUST00000146204.8	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165718007	-	165717695	165721494	A5SS	0.11	50	50	ENSMUST00000146204.8	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165717695	165718007	-	165717695	165726099	A5SS	0.11	50	50	ENSMUST00000150564.2	ENSMUSG00000039671.19	Zmynd8	chr2	protein_coding	zinc finger, MYND-type containing 8
chr2	165890475;165891237	165891158;165891986	+	165890475	165891986	cassetteExon	0.5	100	100	ENSMUST00000109252.8	ENSMUSG00000027678.18	Ncoa3	chr2	protein_coding	nuclear receptor coactivator 3
chr2	165909565	165910249	+	165909565	165910252	A3SS	0.5	50	50	ENSMUST00000109252.8	ENSMUSG00000027678.18	Ncoa3	chr2	protein_coding	nuclear receptor coactivator 3
chr2	165974774;165983686	165983634;165997423	-	165974774	165997423	cassetteExon	0.5	100	100	ENSMUST00000109249.9	ENSMUSG00000006800.15	Sulf2	chr2	protein_coding	sulfatase 2
chr2	165974774	165996265	-	165974774	165997423	A5SS	0.2	50	50	ENSMUST00000109249.9	ENSMUSG00000006800.15	Sulf2	chr2	protein_coding	sulfatase 2
chr2	165974774	165996598	-	165974774	165997423	A5SS	0.2	50	50	ENSMUST00000109249.9	ENSMUSG00000006800.15	Sulf2	chr2	protein_coding	sulfatase 2
chr2	165974774	165996867	-	165974774	165997423	A5SS	0.2	50	50	ENSMUST00000109249.9	ENSMUSG00000006800.15	Sulf2	chr2	protein_coding	sulfatase 2
chr2	165974774	165996265	-	165974774	165983634	A5SS&ES	0.2	50	50	ENSMUST00000146497.9	ENSMUSG00000006800.15	Sulf2	chr2	protein_coding	sulfatase 2
chr2	165974774	165996598	-	165974774	165983634	A5SS&ES	0.2	50	50	ENSMUST00000146497.9	ENSMUSG00000006800.15	Sulf2	chr2	protein_coding	sulfatase 2
chr2	165974774	165996867	-	165974774	165983634	A5SS&ES	0.2	50	50	ENSMUST00000146497.9	ENSMUSG00000006800.15	Sulf2	chr2	protein_coding	sulfatase 2
chr2	165974774	165996265	-	165974774	165996867	A5SS	0.2	50	50	ENSMUST00000088086.4	ENSMUSG00000006800.15	Sulf2	chr2	protein_coding	sulfatase 2
chr2	165974774	165996598	-	165974774	165996867	A5SS	0.2	50	50	ENSMUST00000088086.4	ENSMUSG00000006800.15	Sulf2	chr2	protein_coding	sulfatase 2
chr2	165974774	165996265	-	165974774	165996598	A5SS	0.2	50	50	ENSMUST00000139266.2	ENSMUSG00000006800.15	Sulf2	chr2	protein_coding	sulfatase 2
chr2	166223417;166234682	166234552;166239941	-	166223417	166239941	cassetteExon	0.5	100	100	ENSMUST00000151070.2	ENSMUSG00000087617.2	Gm14268	chr2	lncRNA	predicted gene 14268
chr2	166347506	166358169	-	166347506	166351649	5pMXE	0.16	50	50	ENSMUST00000226870.2	ENSMUSG00000085682.3	Gm14267	chr2	transcribed_processed_pseudogene	predicted gene 14267
chr2	166347506	166360518	-	166347506	166351649	5pMXE	0.16	50	50	ENSMUST00000226870.2	ENSMUSG00000085682.3	Gm14267	chr2	transcribed_processed_pseudogene	predicted gene 14267
chr2	166345339	166351033	-	166345339	166347372	A5SS&ES	0.5	50	50	ENSMUST00000226870.2	ENSMUSG00000085682.3	Gm14267	chr2	transcribed_processed_pseudogene	predicted gene 14267
chr2	166347506	166347940	-	166347506	166351649	A5SS	0.16	50	50	ENSMUST00000226870.2	ENSMUSG00000085682.3	Gm14267	chr2	transcribed_processed_pseudogene	predicted gene 14267
chr2	166347506	166351033	-	166347506	166351649	A5SS	0.16	50	50	ENSMUST00000226870.2	ENSMUSG00000085682.3	Gm14267	chr2	transcribed_processed_pseudogene	predicted gene 14267
chr2	166347506	166351066	-	166347506	166351649	A5SS	0.16	50	50	ENSMUST00000226870.2	ENSMUSG00000085682.3	Gm14267	chr2	transcribed_processed_pseudogene	predicted gene 14267
chr2	166347506	166360518	-	166347506	166358169	5pMXE	0.16	50	50	ENSMUST00000228324.2	ENSMUSG00000085682.3	Gm14267	chr2	transcribed_processed_pseudogene	predicted gene 14267
chr2	166347506	166347940	-	166347506	166358169	A5SS	0.16	50	50	ENSMUST00000228324.2	ENSMUSG00000085682.3	Gm14267	chr2	transcribed_processed_pseudogene	predicted gene 14267
chr2	166347506	166351033	-	166347506	166358169	A5SS	0.16	50	50	ENSMUST00000228324.2	ENSMUSG00000085682.3	Gm14267	chr2	transcribed_processed_pseudogene	predicted gene 14267
chr2	166347506	166351066	-	166347506	166358169	A5SS	0.16	50	50	ENSMUST00000228324.2	ENSMUSG00000085682.3	Gm14267	chr2	transcribed_processed_pseudogene	predicted gene 14267
chr2	166345339	166351033	-	166345339;166347506	166347372;166351033	ES	0.5	50	50	ENSMUST00000228242.2	ENSMUSG00000085682.3	Gm14267	chr2	transcribed_processed_pseudogene	predicted gene 14267
chr2	166347506	166360518	-	166347506	166351033	5pMXE	0.16	50	50	ENSMUST00000228242.2	ENSMUSG00000085682.3	Gm14267	chr2	transcribed_processed_pseudogene	predicted gene 14267
chr2	166347506	166347940	-	166347506	166351033	A5SS	0.16	50	50	ENSMUST00000228242.2	ENSMUSG00000085682.3	Gm14267	chr2	transcribed_processed_pseudogene	predicted gene 14267
chr2	166347506	166351066	-	166347506	166351033	A5SS	0.16	50	50	ENSMUST00000228242.2	ENSMUSG00000085682.3	Gm14267	chr2	transcribed_processed_pseudogene	predicted gene 14267
chr2	166347506	166360518	-	166347506	166351066	5pMXE	0.16	50	50	ENSMUST00000228863.2	ENSMUSG00000085682.3	Gm14267	chr2	transcribed_processed_pseudogene	predicted gene 14267
chr2	166347506	166347940	-	166347506	166351066	A5SS	0.16	50	50	ENSMUST00000228863.2	ENSMUSG00000085682.3	Gm14267	chr2	transcribed_processed_pseudogene	predicted gene 14267
chr2	166347506	166347940	-	166347506	166360518	A5SS	0.16	50	50	ENSMUST00000226697.2	ENSMUSG00000085682.3	Gm14267	chr2	transcribed_processed_pseudogene	predicted gene 14267
chr2	166410715	166410972	-	166409770	166410972	A3SS	0.5	50	50	ENSMUST00000036719.12	ENSMUSG00000039621.14	Prex1	chr2	protein_coding	phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1
chr2	166480339	166480473	-	166480339	166486669	A5SS	0.5	50	50	ENSMUST00000036719.12	ENSMUSG00000039621.14	Prex1	chr2	protein_coding	phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1
chr2	166488965	166545393	-	166488965	166555435	A5SS	0.5	50	50	ENSMUST00000036719.12	ENSMUSG00000039621.14	Prex1	chr2	protein_coding	phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1
chr2	166635988	166637046	+	166635988	166637302	A3SS	0.5	50	50	ENSMUST00000151826.2	ENSMUSG00000042854.10	Trp53rkb	chr2	protein_coding	transformation related protein 53 regulating kinase B
chr2	166678377	166687370	+	166678377;166684673	166684605;166687370	ES	0.5	50	50	ENSMUST00000099078.10	ENSMUSG00000074582.11	Arfgef2	chr2	protein_coding	ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
chr2	166779359	166783138	+	166782038	166783138	A5SS&ES	0.5	50	50	ENSMUST00000171410.8	ENSMUSG00000002718.15	Cse1l	chr2	protein_coding	chromosome segregation 1-like (S. cerevisiae)
chr2	166769256	166769633	+	166769256;166769530	166769363;166769633	ES	0.5	50	50	ENSMUST00000002790.14	ENSMUSG00000002718.15	Cse1l	chr2	protein_coding	chromosome segregation 1-like (S. cerevisiae)
chr2	166776809	166779262	+	166776809;166777946	166777843;166779262	ES	0.5	50	50	ENSMUST00000002790.14	ENSMUSG00000002718.15	Cse1l	chr2	protein_coding	chromosome segregation 1-like (S. cerevisiae)
chr2	166777946	166781555	+	166777946;166779359	166779262;166781555	ES	0.5	50	50	ENSMUST00000002790.14	ENSMUSG00000002718.15	Cse1l	chr2	protein_coding	chromosome segregation 1-like (S. cerevisiae)
chr2	166770943	166771815	+	166770943	166771705	A3SS	0.5	50	50	ENSMUST00000002790.14	ENSMUSG00000002718.15	Cse1l	chr2	protein_coding	chromosome segregation 1-like (S. cerevisiae)
chr2	166776809;166777946	166777843;166781555	+	166776809;166779359	166779262;166781555	MXE	0.5	100	100	ENSMUST00000169290.8	ENSMUSG00000002718.15	Cse1l	chr2	protein_coding	chromosome segregation 1-like (S. cerevisiae)
chr2	166769256	166769633	+	166769530	166769633	5pMXE	0.5	50	50	ENSMUST00000163437.2	ENSMUSG00000002718.15	Cse1l	chr2	protein_coding	chromosome segregation 1-like (S. cerevisiae)
chr2	166776809	166779262	+	166777946	166779262	A5SS&ES	0.5	50	50	ENSMUST00000163437.2	ENSMUSG00000002718.15	Cse1l	chr2	protein_coding	chromosome segregation 1-like (S. cerevisiae)
chr2	166776809;166779359	166779262;166783138	+	166776809;166782038	166777843;166783138	MXE	0.5	100	100	ENSMUST00000164974.2	ENSMUSG00000002718.15	Cse1l	chr2	protein_coding	chromosome segregation 1-like (S. cerevisiae)
chr2	166777946;166779359	166779262;166783138	+	166777946;166782038	166781555;166783138	MXE	0.5	100	100	ENSMUST00000164974.2	ENSMUSG00000002718.15	Cse1l	chr2	protein_coding	chromosome segregation 1-like (S. cerevisiae)
chr2	166779359;166782038	166781555;166783138	+	166779359	166783138	cassetteExon	0.5	100	100	ENSMUST00000163917.2	ENSMUSG00000002718.15	Cse1l	chr2	protein_coding	chromosome segregation 1-like (S. cerevisiae)
chr2	166795265	166796820	-	166795271	166796820	A3SS	0.5	50	50	ENSMUST00000109235.8	ENSMUSG00000039536.17	Stau1	chr2	protein_coding	staufen double-stranded RNA binding protein 1
chr2	166797050	166801943	-	166797032	166801943	A3SS	0.5	50	50	ENSMUST00000109235.8	ENSMUSG00000039536.17	Stau1	chr2	protein_coding	staufen double-stranded RNA binding protein 1
chr2	166791279	166791620	-	166791279	166791664	A5SS	0.5	50	50	ENSMUST00000109235.8	ENSMUSG00000039536.17	Stau1	chr2	protein_coding	staufen double-stranded RNA binding protein 1
chr2	166806637	166818578	-	166806637	166837954	A5SS	0.5	50	50	ENSMUST00000109235.8	ENSMUSG00000039536.17	Stau1	chr2	protein_coding	staufen double-stranded RNA binding protein 1
chr2	166884607	166885282	-	166884607	166885916	A5SS	0.5	50	50	ENSMUST00000048988.14	ENSMUSG00000039501.15	Znfx1	chr2	protein_coding	zinc finger, NFX1-type containing 1
chr2	166902062	166902252	-	166902062	166904430	A5SS	0.33	50	50	ENSMUST00000048988.14	ENSMUSG00000039501.15	Znfx1	chr2	protein_coding	zinc finger, NFX1-type containing 1
chr2	166902062	166904514	-	166902062	166904430	A5SS	0.33	50	50	ENSMUST00000048988.14	ENSMUSG00000039501.15	Znfx1	chr2	protein_coding	zinc finger, NFX1-type containing 1
chr2	166902062	166904514	-	166902062	166902252	5pMXE	0.33	50	50	ENSMUST00000155281.8	ENSMUSG00000039501.15	Znfx1	chr2	protein_coding	zinc finger, NFX1-type containing 1
chr2	166907137	166907233	+	166907137	166907354	A3SS	0.5	50	50	ENSMUST00000189909.7	ENSMUSG00000074578.15	Zfas1	chr2	lncRNA	zinc finger, NFX1-type containing 1, antisense RNA 1
chr2	166941780	166942648	-	166941780	166942643	A5SS	0.5	50	50	ENSMUST00000144351.2	ENSMUSG00000050556.10	Kcnb1	chr2	protein_coding	potassium voltage gated channel, Shab-related subfamily, member 1
chr2	167031326	167033750	+	167031326;167033335	167033212;167033750	ES	0.5	50	50	ENSMUST00000151217.8	ENSMUSG00000085151.8	1110018N20Rik	chr2	lncRNA	RIKEN cDNA 1110018N20 gene
chr2	167031639	167033212	+	167031326	167033212	A5SS	0.5	50	50	ENSMUST00000151217.8	ENSMUSG00000085151.8	1110018N20Rik	chr2	lncRNA	RIKEN cDNA 1110018N20 gene
chr2	167048805	167050101	-	167048805;167049283	167049102;167050101	ES	0.5	50	50	ENSMUST00000088041.11	ENSMUSG00000017969.14	Ptgis	chr2	protein_coding	prostaglandin I2 (prostacyclin) synthase
chr2	167045388	167048654	-	167033905	167048654	A3SS	0.5	50	50	ENSMUST00000088041.11	ENSMUSG00000017969.14	Ptgis	chr2	protein_coding	prostaglandin I2 (prostacyclin) synthase
chr2	167144031	167147580	-	167144031;167147038	167146916;167147580	ES	0.5	50	50	ENSMUST00000109221.9	ENSMUSG00000017929.14	B4galt5	chr2	protein_coding	UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5
chr2	167155141	167155723	-	167155141	167190838	A5SS	0.33	50	50	ENSMUST00000109221.9	ENSMUSG00000017929.14	B4galt5	chr2	protein_coding	UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5
chr2	167155141	167155768	-	167155141	167190838	A5SS	0.33	50	50	ENSMUST00000109221.9	ENSMUSG00000017929.14	B4galt5	chr2	protein_coding	UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5
chr2	167155141	167155768	-	167155141	167155723	A5SS	0.33	50	50	ENSMUST00000155623.8	ENSMUSG00000017929.14	B4galt5	chr2	protein_coding	UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5
chr2	167266217	167283049	+	167266217;167276782	167276702;167283049	ES	0.5	50	50	ENSMUST00000047815.13	ENSMUSG00000039463.15	Slc9a8	chr2	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 8
chr2	167287527	167293127	+	167287527;167288456	167288422;167293127	ES	0.25	50	50	ENSMUST00000047815.13	ENSMUSG00000039463.15	Slc9a8	chr2	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 8
chr2	167309687	167313302	+	167309687;167310995	167310884;167313302	ES	0.5	50	50	ENSMUST00000047815.13	ENSMUSG00000039463.15	Slc9a8	chr2	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 8
chr2	167299385	167301581	+	167299385	167301569	A3SS	0.5	50	50	ENSMUST00000047815.13	ENSMUSG00000039463.15	Slc9a8	chr2	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 8
chr2	167266569	167276702	+	167266217	167276702	A5SS	0.5	50	50	ENSMUST00000047815.13	ENSMUSG00000039463.15	Slc9a8	chr2	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 8
chr2	167293005	167293127	+	167288456	167293127	A5SS	0.25	50	50	ENSMUST00000047815.13	ENSMUSG00000039463.15	Slc9a8	chr2	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 8
chr2	167285452	167293127	+	167285452	167287426	3pMXE	0.5	50	50	ENSMUST00000135353.8	ENSMUSG00000039463.15	Slc9a8	chr2	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 8
chr2	167266217	167283049	+	167276782	167283049	A5SS&ES	0.5	50	50	ENSMUST00000131956.8	ENSMUSG00000039463.15	Slc9a8	chr2	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 8
chr2	167266217	167283049	+	167266217	167276702	3pMXE	0.5	50	50	ENSMUST00000124139.8	ENSMUSG00000039463.15	Slc9a8	chr2	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 8
chr2	167285452	167293127	+	167285452;167287527	167287426;167293127	ES	0.25	50	50	ENSMUST00000141400.8	ENSMUSG00000039463.15	Slc9a8	chr2	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 8
chr2	167293270	167299247	+	167293270	167307261	A3SS	0.5	50	50	ENSMUST00000141400.8	ENSMUSG00000039463.15	Slc9a8	chr2	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 8
chr2	167293005	167293127	+	167287527	167293127	A5SS	0.25	50	50	ENSMUST00000141400.8	ENSMUSG00000039463.15	Slc9a8	chr2	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 8
chr2	167301674	167307261	+	167293270	167307261	A5SS	0.5	50	50	ENSMUST00000141400.8	ENSMUSG00000039463.15	Slc9a8	chr2	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 8
chr2	167288456	167293127	+	167285452	167293127	A5SS	0.25	50	50	ENSMUST00000139673.8	ENSMUSG00000039463.15	Slc9a8	chr2	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 8
chr2	167293005	167293127	+	167285452	167293127	A5SS	0.25	50	50	ENSMUST00000139673.8	ENSMUSG00000039463.15	Slc9a8	chr2	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 8
chr2	167309687	167313302	+	167309687	167310884	3pMXE	0.5	50	50	ENSMUST00000155585.8	ENSMUSG00000039463.15	Slc9a8	chr2	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 8
chr2	167327513;167328412	167328352;167334679	-	167327513	167334679	cassetteExon	0.5	100	100	ENSMUST00000057627.16	ENSMUSG00000047030.16	Spata2	chr2	protein_coding	spermatogenesis associated 2
chr2	167327513;167331288	167331089;167334679	-	167327513	167334679	cassetteExon	0.5	100	100	ENSMUST00000057627.16	ENSMUSG00000047030.16	Spata2	chr2	protein_coding	spermatogenesis associated 2
chr2	167327513;167331288	167331089;167334679	-	167327513;167328412	167328352;167334679	MXE	0.5	100	100	ENSMUST00000126389.8	ENSMUSG00000047030.16	Spata2	chr2	protein_coding	spermatogenesis associated 2
chr2	167328412;167331288	167331089;167334679	-	167328412	167334679	cassetteExon	0.5	100	100	ENSMUST00000126389.8	ENSMUSG00000047030.16	Spata2	chr2	protein_coding	spermatogenesis associated 2
chr2	167327513;167328412	167328352;167331089	-	167327513	167331089	cassetteExon	0.5	100	100	ENSMUST00000155875.8	ENSMUSG00000047030.16	Spata2	chr2	protein_coding	spermatogenesis associated 2
chr2	167345521	167352796	+	167345521;167349117	167348967;167352796	ES	0.5	50	50	ENSMUST00000109214.8	ENSMUSG00000006418.18	Rnf114	chr2	protein_coding	ring finger protein 114
chr2	167451167	167459749	-	167451167;167452349	167452224;167459749	ES	0.5	50	50	ENSMUST00000109207.10	ENSMUSG00000078923.11	Ube2v1	chr2	protein_coding	ubiquitin-conjugating enzyme E2 variant 1
chr2	167459897	167486684	-	167459897	167473860	5pMXE	0.2	50	50	ENSMUST00000109207.10	ENSMUSG00000078923.11	Ube2v1	chr2	protein_coding	ubiquitin-conjugating enzyme E2 variant 1
chr2	167459897;167471208	167470989;167473860	-	167459897	167473860	cassetteExon	0.5	100	100	ENSMUST00000109207.10	ENSMUSG00000078923.11	Ube2v1	chr2	protein_coding	ubiquitin-conjugating enzyme E2 variant 1
chr2	167459897;167471208	167471087;167473860	-	167459897	167473860	cassetteExon	0.5	100	100	ENSMUST00000109207.10	ENSMUSG00000078923.11	Ube2v1	chr2	protein_coding	ubiquitin-conjugating enzyme E2 variant 1
chr2	167459897;167471208	167471090;167473860	-	167459897	167473860	cassetteExon	0.5	100	100	ENSMUST00000109207.10	ENSMUSG00000078923.11	Ube2v1	chr2	protein_coding	ubiquitin-conjugating enzyme E2 variant 1
chr2	167459897	167470989	-	167459897	167471090	A5SS	0.25	50	50	ENSMUST00000151365.8	ENSMUSG00000078923.11	Ube2v1	chr2	protein_coding	ubiquitin-conjugating enzyme E2 variant 1
chr2	167459897	167471087	-	167459897	167471090	A5SS	0.25	50	50	ENSMUST00000151365.8	ENSMUSG00000078923.11	Ube2v1	chr2	protein_coding	ubiquitin-conjugating enzyme E2 variant 1
chr2	167459897	167471087	-	167459897	167470989	A5SS	0.25	50	50	ENSMUST00000130284.2	ENSMUSG00000078923.11	Ube2v1	chr2	protein_coding	ubiquitin-conjugating enzyme E2 variant 1
chr2	167451167	167459749	-	167451167	167452224	5pMXE	0.5	50	50	ENSMUST00000144628.2	ENSMUSG00000078923.11	Ube2v1	chr2	protein_coding	ubiquitin-conjugating enzyme E2 variant 1
chr2	167451167	167459749	-	167452349	167459749	3pMXE	0.5	50	50	ENSMUST00000140216.2	ENSMUSG00000078923.11	Ube2v1	chr2	protein_coding	ubiquitin-conjugating enzyme E2 variant 1
chr2	167496647	167531431	-	167496647	167503293	5pMXE	0.5	50	50	ENSMUST00000125544.3	ENSMUSG00000089739.3	Gm20431	chr2	protein_coding	predicted gene 20431
chr2	167486102	167486684	-	167459897	167486684	A3SS	0.5	50	50	ENSMUST00000125544.3	ENSMUSG00000089739.3	Gm20431	chr2	protein_coding	predicted gene 20431
chr2	167459897	167470989	-	167459897	167486684	A5SS	0.2	50	50	ENSMUST00000125544.3	ENSMUSG00000089739.3	Gm20431	chr2	protein_coding	predicted gene 20431
chr2	167459897	167471087	-	167459897	167486684	A5SS	0.2	50	50	ENSMUST00000125544.3	ENSMUSG00000089739.3	Gm20431	chr2	protein_coding	predicted gene 20431
chr2	167459897	167471090	-	167459897	167486684	A5SS	0.2	50	50	ENSMUST00000125544.3	ENSMUSG00000089739.3	Gm20431	chr2	protein_coding	predicted gene 20431
chr2	167533180	167537247	+	167533180	167558850	A3SS	0.5	50	50	ENSMUST00000141923.2	ENSMUSG00000006462.7	A530013C23Rik	chr2	lncRNA	RIKEN cDNA A530013C23 gene
chr2	167619586	167620831	+	167619586	167622643	A3SS	0.5	50	50	ENSMUST00000139927.2	ENSMUSG00000084797.2	Gm14321	chr2	lncRNA	predicted gene 14321
chr2	167807030	167809617	+	167807030	167809649	A3SS	0.5	50	50	ENSMUST00000147210.8	ENSMUSG00000027540.14	Ptpn1	chr2	protein_coding	protein tyrosine phosphatase, non-receptor type 1
chr2	167774476	167805548	+	167774249	167805548	A5SS	0.2	50	50	ENSMUST00000147210.8	ENSMUSG00000027540.14	Ptpn1	chr2	protein_coding	protein tyrosine phosphatase, non-receptor type 1
chr2	167777441	167805548	+	167774249	167805548	A5SS	0.2	50	50	ENSMUST00000147210.8	ENSMUSG00000027540.14	Ptpn1	chr2	protein_coding	protein tyrosine phosphatase, non-receptor type 1
chr2	167793999	167805548	+	167774249	167805548	A5SS	0.2	50	50	ENSMUST00000147210.8	ENSMUSG00000027540.14	Ptpn1	chr2	protein_coding	protein tyrosine phosphatase, non-receptor type 1
chr2	167800541	167805548	+	167774249	167805548	A5SS	0.2	50	50	ENSMUST00000147210.8	ENSMUSG00000027540.14	Ptpn1	chr2	protein_coding	protein tyrosine phosphatase, non-receptor type 1
chr2	167774476;167777441	167777284;167805548	+	167774476	167805548	cassetteExon	0.5	100	100	ENSMUST00000029053.8	ENSMUSG00000027540.14	Ptpn1	chr2	protein_coding	protein tyrosine phosphatase, non-receptor type 1
chr2	167774476;167793999	167793876;167805548	+	167774476	167805548	cassetteExon	0.5	100	100	ENSMUST00000029053.8	ENSMUSG00000027540.14	Ptpn1	chr2	protein_coding	protein tyrosine phosphatase, non-receptor type 1
chr2	167774476;167800541	167800082;167805548	+	167774476	167805548	cassetteExon	0.5	100	100	ENSMUST00000029053.8	ENSMUSG00000027540.14	Ptpn1	chr2	protein_coding	protein tyrosine phosphatase, non-receptor type 1
chr2	167774476;167777441	167777284;167805548	+	167774476;167793999	167793876;167805548	MXE	0.5	100	100	ENSMUST00000126839.8	ENSMUSG00000027540.14	Ptpn1	chr2	protein_coding	protein tyrosine phosphatase, non-receptor type 1
chr2	167774476;167800541	167800082;167805548	+	167774476;167793999	167793876;167805548	MXE	0.5	100	100	ENSMUST00000126839.8	ENSMUSG00000027540.14	Ptpn1	chr2	protein_coding	protein tyrosine phosphatase, non-receptor type 1
chr2	167793243	167793876	+	167774476	167793876	A5SS	0.5	50	50	ENSMUST00000126839.8	ENSMUSG00000027540.14	Ptpn1	chr2	protein_coding	protein tyrosine phosphatase, non-receptor type 1
chr2	167774476;167777441	167777284;167805548	+	167774476;167800541	167800082;167805548	MXE	0.5	100	100	ENSMUST00000144249.2	ENSMUSG00000027540.14	Ptpn1	chr2	protein_coding	protein tyrosine phosphatase, non-receptor type 1
chr2	167800541	167805548	+	167793999	167805548	A5SS	0.5	50	50	ENSMUST00000142717.2	ENSMUSG00000027540.14	Ptpn1	chr2	protein_coding	protein tyrosine phosphatase, non-receptor type 1
chr2	167831725	167833095	-	167831642	167833095	A3SS	0.5	50	50	ENSMUST00000123782.8	ENSMUSG00000074577.10	Ripor3	chr2	protein_coding	RIPOR family member 3
chr2	168031314	168048494	-	168031314;168046694	168046520;168048494	ES	0.33	50	50	ENSMUST00000057793.11	ENSMUSG00000051149.16	Adnp	chr2	protein_coding	activity-dependent neuroprotective protein
chr2	168029579	168048494	-	168029579;168031314	168031202;168048494	ES	0.33	50	50	ENSMUST00000088001.6	ENSMUSG00000051149.16	Adnp	chr2	protein_coding	activity-dependent neuroprotective protein
chr2	168031314	168052351	-	168031314	168048494	5pMXE	0.33	50	50	ENSMUST00000088001.6	ENSMUSG00000051149.16	Adnp	chr2	protein_coding	activity-dependent neuroprotective protein
chr2	168046694	168048494	-	168029579	168048494	A3SS	0.33	50	50	ENSMUST00000139984.8	ENSMUSG00000051149.16	Adnp	chr2	protein_coding	activity-dependent neuroprotective protein
chr2	168031314	168048494	-	168046694	168048494	3pMXE	0.33	50	50	ENSMUST00000131200.2	ENSMUSG00000051149.16	Adnp	chr2	protein_coding	activity-dependent neuroprotective protein
chr2	168059696	168061957	-	168059696;168061165	168061140;168061957	ES	0.5	50	50	ENSMUST00000138667.2	ENSMUSG00000093752.2	Gm20716	chr2	protein_coding	predicted gene 20716
chr2	168069422	168072309	-	168069422	168072113	5pMXE	0.33	50	50	ENSMUST00000138667.2	ENSMUSG00000093752.2	Gm20716	chr2	protein_coding	predicted gene 20716
chr2	168053347	168054880	-	168053400	168054880	A3SS	0.5	50	50	ENSMUST00000138667.2	ENSMUSG00000093752.2	Gm20716	chr2	protein_coding	predicted gene 20716
chr2	168029579	168048494	-	168029579	168031202	A5SS&ES	0.5	50	50	ENSMUST00000138667.2	ENSMUSG00000093752.2	Gm20716	chr2	protein_coding	predicted gene 20716
chr2	168031314	168046520	-	168031314	168052351	A5SS	0.33	50	50	ENSMUST00000138667.2	ENSMUSG00000093752.2	Gm20716	chr2	protein_coding	predicted gene 20716
chr2	168069422	168071731	-	168069422	168072113	A5SS	0.33	50	50	ENSMUST00000138667.2	ENSMUSG00000093752.2	Gm20716	chr2	protein_coding	predicted gene 20716
chr2	168069422	168071731	-	168069422	168072309	A5SS	0.33	50	50	ENSMUST00000109193.8	ENSMUSG00000078919.11	Dpm1	chr2	protein_coding	dolichol-phosphate (beta-D) mannosyltransferase 1
chr2	168111188	168123301	-	168111188	168122798	5pMXE	0.5	50	50	ENSMUST00000109191.2	ENSMUSG00000074575.5	Kcng1	chr2	protein_coding	potassium voltage-gated channel, subfamily G, member 1
chr2	168413553	168443389	-	168413553	168431982	5pMXE	0.5	50	50	ENSMUST00000074618.10	ENSMUSG00000027544.17	Nfatc2	chr2	protein_coding	nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2
chr2	168322169;168328691	168328606;168346365	-	168322169	168346365	cassetteExon	0.5	100	100	ENSMUST00000074618.10	ENSMUSG00000027544.17	Nfatc2	chr2	protein_coding	nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2
chr2	168361472	168365158	-	168349290	168365158	A3SS	0.5	50	50	ENSMUST00000074618.10	ENSMUSG00000027544.17	Nfatc2	chr2	protein_coding	nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2
chr2	168378325	168394111	-	168378325	168409059	A5SS	0.5	50	50	ENSMUST00000074618.10	ENSMUSG00000027544.17	Nfatc2	chr2	protein_coding	nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2
chr2	168413553	168443389	-	168413033	168443389	A3SS	0.5	50	50	ENSMUST00000099067.10	ENSMUSG00000027544.17	Nfatc2	chr2	protein_coding	nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2
chr2	168552896	168583602	-	168552896	168575941	5pMXE	0.14	50	50	ENSMUST00000109175.9	ENSMUSG00000027546.16	Atp9a	chr2	protein_coding	ATPase, class II, type 9A
chr2	168552896	168584008	-	168552896	168575941	5pMXE	0.14	50	50	ENSMUST00000109175.9	ENSMUSG00000027546.16	Atp9a	chr2	protein_coding	ATPase, class II, type 9A
chr2	168552896	168584070	-	168552896	168575941	5pMXE	0.14	50	50	ENSMUST00000109175.9	ENSMUSG00000027546.16	Atp9a	chr2	protein_coding	ATPase, class II, type 9A
chr2	168552896	168584075	-	168552896	168575941	5pMXE	0.14	50	50	ENSMUST00000109175.9	ENSMUSG00000027546.16	Atp9a	chr2	protein_coding	ATPase, class II, type 9A
chr2	168510138	168511920	-	168510138	168515397	A5SS	0.5	50	50	ENSMUST00000109175.9	ENSMUSG00000027546.16	Atp9a	chr2	protein_coding	ATPase, class II, type 9A
chr2	168552896	168554562	-	168552896	168575941	A5SS	0.14	50	50	ENSMUST00000109175.9	ENSMUSG00000027546.16	Atp9a	chr2	protein_coding	ATPase, class II, type 9A
chr2	168552896	168554666	-	168552896	168575941	A5SS	0.14	50	50	ENSMUST00000109175.9	ENSMUSG00000027546.16	Atp9a	chr2	protein_coding	ATPase, class II, type 9A
chr2	168552896	168584008	-	168552896	168583602	5pMXE	0.14	50	50	ENSMUST00000029060.11	ENSMUSG00000027546.16	Atp9a	chr2	protein_coding	ATPase, class II, type 9A
chr2	168552896	168584070	-	168552896	168583602	5pMXE	0.14	50	50	ENSMUST00000029060.11	ENSMUSG00000027546.16	Atp9a	chr2	protein_coding	ATPase, class II, type 9A
chr2	168552896	168584075	-	168552896	168583602	5pMXE	0.14	50	50	ENSMUST00000029060.11	ENSMUSG00000027546.16	Atp9a	chr2	protein_coding	ATPase, class II, type 9A
chr2	168552896	168554562	-	168552896	168583602	A5SS	0.14	50	50	ENSMUST00000029060.11	ENSMUSG00000027546.16	Atp9a	chr2	protein_coding	ATPase, class II, type 9A
chr2	168552896	168554666	-	168552896	168583602	A5SS	0.14	50	50	ENSMUST00000029060.11	ENSMUSG00000027546.16	Atp9a	chr2	protein_coding	ATPase, class II, type 9A
chr2	168552896	168584070	-	168552896	168584008	5pMXE	0.14	50	50	ENSMUST00000109177.8	ENSMUSG00000027546.16	Atp9a	chr2	protein_coding	ATPase, class II, type 9A
chr2	168552896	168584075	-	168552896	168584008	5pMXE	0.14	50	50	ENSMUST00000109177.8	ENSMUSG00000027546.16	Atp9a	chr2	protein_coding	ATPase, class II, type 9A
chr2	168552896	168554562	-	168552896	168584008	A5SS	0.14	50	50	ENSMUST00000109177.8	ENSMUSG00000027546.16	Atp9a	chr2	protein_coding	ATPase, class II, type 9A
chr2	168552896	168554666	-	168552896	168584008	A5SS	0.14	50	50	ENSMUST00000109177.8	ENSMUSG00000027546.16	Atp9a	chr2	protein_coding	ATPase, class II, type 9A
chr2	168552896	168554562	-	168552896	168584070	A5SS	0.14	50	50	ENSMUST00000151610.8	ENSMUSG00000027546.16	Atp9a	chr2	protein_coding	ATPase, class II, type 9A
chr2	168552896	168554666	-	168552896	168584070	A5SS	0.14	50	50	ENSMUST00000151610.8	ENSMUSG00000027546.16	Atp9a	chr2	protein_coding	ATPase, class II, type 9A
chr2	168552896	168584075	-	168552896	168584070	A5SS	0.14	50	50	ENSMUST00000151610.8	ENSMUSG00000027546.16	Atp9a	chr2	protein_coding	ATPase, class II, type 9A
chr2	168552896	168554562	-	168552896	168584075	A5SS	0.14	50	50	ENSMUST00000156397.8	ENSMUSG00000027546.16	Atp9a	chr2	protein_coding	ATPase, class II, type 9A
chr2	168552896	168554666	-	168552896	168584075	A5SS	0.14	50	50	ENSMUST00000156397.8	ENSMUSG00000027546.16	Atp9a	chr2	protein_coding	ATPase, class II, type 9A
chr2	168552896	168554666	-	168552896	168554562	A5SS	0.14	50	50	ENSMUST00000123156.8	ENSMUSG00000027546.16	Atp9a	chr2	protein_coding	ATPase, class II, type 9A
chr2	168598720	168608832	-	168594660	168608832	A3SS	0.33	50	50	ENSMUST00000075044.10	ENSMUSG00000027547.18	Sall4	chr2	protein_coding	spalt like transcription factor 4
chr2	168603542	168608832	-	168594660	168608832	A3SS	0.33	50	50	ENSMUST00000075044.10	ENSMUSG00000027547.18	Sall4	chr2	protein_coding	spalt like transcription factor 4
chr2	168594660	168596354	-	168594660	168608832	A5SS	0.33	50	50	ENSMUST00000075044.10	ENSMUSG00000027547.18	Sall4	chr2	protein_coding	spalt like transcription factor 4
chr2	168594660	168597686	-	168594660	168608832	A5SS	0.33	50	50	ENSMUST00000075044.10	ENSMUSG00000027547.18	Sall4	chr2	protein_coding	spalt like transcription factor 4
chr2	168594660	168608832	-	168594660;168598720	168596354;168608832	ES	0.33	50	50	ENSMUST00000029061.12	ENSMUSG00000027547.18	Sall4	chr2	protein_coding	spalt like transcription factor 4
chr2	168598720	168609628	-	168598720	168608832	5pMXE	0.25	50	50	ENSMUST00000029061.12	ENSMUSG00000027547.18	Sall4	chr2	protein_coding	spalt like transcription factor 4
chr2	168598720;168603542	168603469;168608832	-	168598720	168608832	cassetteExon	0.5	100	100	ENSMUST00000029061.12	ENSMUSG00000027547.18	Sall4	chr2	protein_coding	spalt like transcription factor 4
chr2	168594660	168597686	-	168594660	168596354	A5SS	0.33	50	50	ENSMUST00000029061.12	ENSMUSG00000027547.18	Sall4	chr2	protein_coding	spalt like transcription factor 4
chr2	168598720	168607014	-	168598720	168608832	A5SS	0.25	50	50	ENSMUST00000029061.12	ENSMUSG00000027547.18	Sall4	chr2	protein_coding	spalt like transcription factor 4
chr2	168594660	168608832	-	168594660;168598720	168597686;168608832	ES	0.33	50	50	ENSMUST00000103074.2	ENSMUSG00000027547.18	Sall4	chr2	protein_coding	spalt like transcription factor 4
chr2	168597049	168597686	-	168594660	168597686	A3SS	0.5	50	50	ENSMUST00000103074.2	ENSMUSG00000027547.18	Sall4	chr2	protein_coding	spalt like transcription factor 4
chr2	168598720	168609628	-	168598720	168607014	5pMXE	0.25	50	50	ENSMUST00000137536.2	ENSMUSG00000027547.18	Sall4	chr2	protein_coding	spalt like transcription factor 4
chr2	168598720	168603469	-	168598720	168607014	A5SS	0.25	50	50	ENSMUST00000137536.2	ENSMUSG00000027547.18	Sall4	chr2	protein_coding	spalt like transcription factor 4
chr2	168598720	168603469	-	168598720	168609628	A5SS	0.25	50	50	ENSMUST00000125138.2	ENSMUSG00000027547.18	Sall4	chr2	protein_coding	spalt like transcription factor 4
chr2	168768853	168777131	-	168748909	168777131	A3SS	0.33	50	50	ENSMUST00000109162.9	ENSMUSG00000027551.16	Zfp64	chr2	protein_coding	zinc finger protein 64
chr2	168776859	168777131	-	168748909	168777131	A3SS	0.33	50	50	ENSMUST00000109162.9	ENSMUSG00000027551.16	Zfp64	chr2	protein_coding	zinc finger protein 64
chr2	168748909	168754154	-	168748909	168777131	A5SS	0.5	50	50	ENSMUST00000109162.9	ENSMUSG00000027551.16	Zfp64	chr2	protein_coding	zinc finger protein 64
chr2	168776859	168777131	-	168768853	168777131	A3SS	0.33	50	50	ENSMUST00000087971.11	ENSMUSG00000027551.16	Zfp64	chr2	protein_coding	zinc finger protein 64
chr2	169728506	169912188	+	169728506	169754528	3pMXE	0.5	50	50	ENSMUST00000109159.3	ENSMUSG00000047907.12	Tshz2	chr2	protein_coding	teashirt zinc finger family member 2
chr2	169728379	169754528	+	169728506	169754528	A5SS	0.5	50	50	ENSMUST00000109159.3	ENSMUSG00000047907.12	Tshz2	chr2	protein_coding	teashirt zinc finger family member 2
chr2	169728379	169754528	+	169728379	169912188	A3SS	0.5	50	50	ENSMUST00000185239.2	ENSMUSG00000047907.12	Tshz2	chr2	protein_coding	teashirt zinc finger family member 2
chr2	169728506	169912188	+	169728379	169912188	A5SS	0.5	50	50	ENSMUST00000185239.2	ENSMUSG00000047907.12	Tshz2	chr2	protein_coding	teashirt zinc finger family member 2
chr2	169962673	169973577	-	169962673	169972968	5pMXE	0.5	50	50	ENSMUST00000063710.13	ENSMUSG00000052056.15	Zfp217	chr2	protein_coding	zinc finger protein 217
chr2	169973672	169989782	-	169973672	169984534	5pMXE	0.33	50	50	ENSMUST00000109155.8	ENSMUSG00000052056.15	Zfp217	chr2	protein_coding	zinc finger protein 217
chr2	169973672	169975815	-	169973672	169984534	A5SS	0.33	50	50	ENSMUST00000109155.8	ENSMUSG00000052056.15	Zfp217	chr2	protein_coding	zinc finger protein 217
chr2	169973672	169989782	-	169973672	169975815	5pMXE	0.33	50	50	ENSMUST00000125162.8	ENSMUSG00000052056.15	Zfp217	chr2	protein_coding	zinc finger protein 217
chr2	170220849	170229083	-	170220849;170226246	170226109;170229083	ES	0.5	50	50	ENSMUST00000154650.8	ENSMUSG00000013523.14	Bcas1	chr2	protein_coding	breast carcinoma amplified sequence 1
chr2	170212411	170220643	-	170191383	170220643	A3SS	0.5	50	50	ENSMUST00000154650.8	ENSMUSG00000013523.14	Bcas1	chr2	protein_coding	breast carcinoma amplified sequence 1
chr2	170239634	170248194	-	170229872	170248194	A3SS	0.5	50	50	ENSMUST00000154650.8	ENSMUSG00000013523.14	Bcas1	chr2	protein_coding	breast carcinoma amplified sequence 1
chr2	170191383	170191567	-	170191383	170220643	A5SS	0.25	50	50	ENSMUST00000154650.8	ENSMUSG00000013523.14	Bcas1	chr2	protein_coding	breast carcinoma amplified sequence 1
chr2	170191383	170191687	-	170191383	170220643	A5SS	0.25	50	50	ENSMUST00000154650.8	ENSMUSG00000013523.14	Bcas1	chr2	protein_coding	breast carcinoma amplified sequence 1
chr2	170191383	170198168	-	170191383	170220643	A5SS	0.25	50	50	ENSMUST00000154650.8	ENSMUSG00000013523.14	Bcas1	chr2	protein_coding	breast carcinoma amplified sequence 1
chr2	170260575	170262511	-	170260605	170262511	A3SS	0.5	50	50	ENSMUST00000109152.9	ENSMUSG00000013523.14	Bcas1	chr2	protein_coding	breast carcinoma amplified sequence 1
chr2	170191383	170191567	-	170191383	170198168	A5SS	0.25	50	50	ENSMUST00000109152.9	ENSMUSG00000013523.14	Bcas1	chr2	protein_coding	breast carcinoma amplified sequence 1
chr2	170191383	170191687	-	170191383	170198168	A5SS	0.25	50	50	ENSMUST00000109152.9	ENSMUSG00000013523.14	Bcas1	chr2	protein_coding	breast carcinoma amplified sequence 1
chr2	170198233	170198898	-	170198233	170208284	A5SS	0.5	50	50	ENSMUST00000109152.9	ENSMUSG00000013523.14	Bcas1	chr2	protein_coding	breast carcinoma amplified sequence 1
chr2	170191383	170191687	-	170191383	170191567	5pMXE	0.25	50	50	ENSMUST00000156657.8	ENSMUSG00000013523.14	Bcas1	chr2	protein_coding	breast carcinoma amplified sequence 1
chr2	170357766	170358482	+	170357766	170358470	A3SS	0.5	50	50	ENSMUST00000075087.8	ENSMUSG00000052033.14	Pfdn4	chr2	protein_coding	prefoldin 4
chr2	170353389	170357659	+	170338519	170357659	A5SS	0.2	50	50	ENSMUST00000075087.8	ENSMUSG00000052033.14	Pfdn4	chr2	protein_coding	prefoldin 4
chr2	170353475	170357659	+	170338519	170357659	A5SS	0.2	50	50	ENSMUST00000075087.8	ENSMUSG00000052033.14	Pfdn4	chr2	protein_coding	prefoldin 4
chr2	170353857	170357659	+	170338519	170357659	A5SS	0.2	50	50	ENSMUST00000075087.8	ENSMUSG00000052033.14	Pfdn4	chr2	protein_coding	prefoldin 4
chr2	170356715	170357659	+	170338519	170357659	A5SS	0.2	50	50	ENSMUST00000075087.8	ENSMUSG00000052033.14	Pfdn4	chr2	protein_coding	prefoldin 4
chr2	170353475	170357659	+	170353389	170357659	A5SS	0.2	50	50	ENSMUST00000063682.12	ENSMUSG00000052033.14	Pfdn4	chr2	protein_coding	prefoldin 4
chr2	170353857	170357659	+	170353389	170357659	A5SS	0.2	50	50	ENSMUST00000063682.12	ENSMUSG00000052033.14	Pfdn4	chr2	protein_coding	prefoldin 4
chr2	170356715	170357659	+	170353389	170357659	A5SS	0.2	50	50	ENSMUST00000063682.12	ENSMUSG00000052033.14	Pfdn4	chr2	protein_coding	prefoldin 4
chr2	170353857	170357659	+	170353475	170357659	A5SS	0.2	50	50	ENSMUST00000109148.8	ENSMUSG00000052033.14	Pfdn4	chr2	protein_coding	prefoldin 4
chr2	170356715	170357659	+	170353475	170357659	A5SS	0.2	50	50	ENSMUST00000109148.8	ENSMUSG00000052033.14	Pfdn4	chr2	protein_coding	prefoldin 4
chr2	170356715	170357659	+	170353857	170357659	A5SS	0.2	50	50	ENSMUST00000170167.8	ENSMUSG00000052033.14	Pfdn4	chr2	protein_coding	prefoldin 4
chr2	171107049	171110957	+	171107049	171110908	A3SS	0.5	50	50	ENSMUST00000125631.8	ENSMUSG00000084829.8	Gm14266	chr2	lncRNA	predicted gene 14266
chr2	171095295	171098831	+	171035354	171098831	A5SS	0.5	50	50	ENSMUST00000125631.8	ENSMUSG00000084829.8	Gm14266	chr2	lncRNA	predicted gene 14266
chr2	172209091	172212393	-	172209091;172210952	172210906;172212393	ES	0.5	50	50	ENSMUST00000109140.10	ENSMUSG00000027496.16	Aurka	chr2	protein_coding	aurora kinase A
chr2	172210952	172212315	-	172210952	172212393	A5SS	0.5	50	50	ENSMUST00000109140.10	ENSMUSG00000027496.16	Aurka	chr2	protein_coding	aurora kinase A
chr2	172209091	172212393	-	172209091	172210906	A5SS&ES	0.5	50	50	ENSMUST00000109139.8	ENSMUSG00000027496.16	Aurka	chr2	protein_coding	aurora kinase A
chr2	172212947	172214849	+	172212776	172214849	A5SS	0.5	50	50	ENSMUST00000151511.8	ENSMUSG00000027498.15	Cstf1	chr2	protein_coding	cleavage stimulation factor, 3' pre-RNA, subunit 1
chr2	172266600	172268556	+	172266594	172268556	A5SS	0.5	50	50	ENSMUST00000099061.9	ENSMUSG00000074570.15	Cass4	chr2	protein_coding	Cas scaffolding protein family member 4
chr2	172269845;172271639	172271562;172274153	+	172269845	172274153	cassetteExon	0.5	100	100	ENSMUST00000103073.9	ENSMUSG00000074570.15	Cass4	chr2	protein_coding	Cas scaffolding protein family member 4
chr2	172295237	172305097	+	172289033	172305097	A5SS	0.5	50	50	ENSMUST00000029005.4	ENSMUSG00000027502.12	Rtf2	chr2	protein_coding	replication termination factor 2
chr2	172293207	172295841	-	172293207;172294957	172294862;172295841	ES	0.5	50	50	ENSMUST00000099060.2	ENSMUSG00000074569.5	Gcnt7	chr2	protein_coding	glucosaminyl (N-acetyl) transferase family member 7
chr2	172392763	172393327	+	172391802	172393327	A5SS	0.25	50	50	ENSMUST00000030391.9	ENSMUSG00000028640.12	Tfap2c	chr2	protein_coding	transcription factor AP-2, gamma
chr2	172392890	172393327	+	172391802	172393327	A5SS	0.25	50	50	ENSMUST00000030391.9	ENSMUSG00000028640.12	Tfap2c	chr2	protein_coding	transcription factor AP-2, gamma
chr2	172393141	172393327	+	172391802	172393327	A5SS	0.25	50	50	ENSMUST00000030391.9	ENSMUSG00000028640.12	Tfap2c	chr2	protein_coding	transcription factor AP-2, gamma
chr2	172394307	172395336	+	172393967	172395336	A5SS	0.5	50	50	ENSMUST00000030391.9	ENSMUSG00000028640.12	Tfap2c	chr2	protein_coding	transcription factor AP-2, gamma
chr2	172392890	172393327	+	172392763	172393327	A5SS	0.25	50	50	ENSMUST00000128406.8	ENSMUSG00000028640.12	Tfap2c	chr2	protein_coding	transcription factor AP-2, gamma
chr2	172393141	172393327	+	172392763	172393327	A5SS	0.25	50	50	ENSMUST00000128406.8	ENSMUSG00000028640.12	Tfap2c	chr2	protein_coding	transcription factor AP-2, gamma
chr2	172393141	172393327	+	172392890	172393327	A5SS	0.25	50	50	ENSMUST00000122982.2	ENSMUSG00000028640.12	Tfap2c	chr2	protein_coding	transcription factor AP-2, gamma
chr2	172821817	172825809	+	172819986	172825809	A5SS	0.33	50	50	ENSMUST00000144044.8	ENSMUSG00000005883.16	Spo11	chr2	protein_coding	SPO11 initiator of meiotic double stranded breaks
chr2	172823885	172825809	+	172819986	172825809	A5SS	0.33	50	50	ENSMUST00000144044.8	ENSMUSG00000005883.16	Spo11	chr2	protein_coding	SPO11 initiator of meiotic double stranded breaks
chr2	172821817;172823885	172823772;172825809	+	172821817	172825809	cassetteExon	0.5	100	100	ENSMUST00000109125.8	ENSMUSG00000005883.16	Spo11	chr2	protein_coding	SPO11 initiator of meiotic double stranded breaks
chr2	172826731	172827151	+	172826731	172827190	A3SS	0.5	50	50	ENSMUST00000109125.8	ENSMUSG00000005883.16	Spo11	chr2	protein_coding	SPO11 initiator of meiotic double stranded breaks
chr2	172842043	172844452	+	172842169	172844452	A5SS	0.5	50	50	ENSMUST00000029013.10	ENSMUSG00000027509.12	Rae1	chr2	protein_coding	ribonucleic acid export 1
chr2	172864708	172875299	+	172864708;172865174	172865120;172875299	ES	0.5	50	50	ENSMUST00000173393.8	ENSMUSG00000027510.18	Rbm38	chr2	protein_coding	RNA binding motif protein 38
chr2	172864040	172864585	+	172864063	172864585	A5SS	0.25	50	50	ENSMUST00000173393.8	ENSMUSG00000027510.18	Rbm38	chr2	protein_coding	RNA binding motif protein 38
chr2	172864199	172864585	+	172864063	172864585	A5SS	0.25	50	50	ENSMUST00000173393.8	ENSMUSG00000027510.18	Rbm38	chr2	protein_coding	RNA binding motif protein 38
chr2	172864287	172864585	+	172864063	172864585	A5SS	0.25	50	50	ENSMUST00000173393.8	ENSMUSG00000027510.18	Rbm38	chr2	protein_coding	RNA binding motif protein 38
chr2	172864199	172864585	+	172864040	172864585	A5SS	0.25	50	50	ENSMUST00000173878.8	ENSMUSG00000027510.18	Rbm38	chr2	protein_coding	RNA binding motif protein 38
chr2	172864287	172864585	+	172864040	172864585	A5SS	0.25	50	50	ENSMUST00000173878.8	ENSMUSG00000027510.18	Rbm38	chr2	protein_coding	RNA binding motif protein 38
chr2	172864287	172864585	+	172864199	172864585	A5SS	0.25	50	50	ENSMUST00000173720.2	ENSMUSG00000027510.18	Rbm38	chr2	protein_coding	RNA binding motif protein 38
chr2	172864708	172875299	+	172865174	172875299	5pMXE	0.5	50	50	ENSMUST00000130430.2	ENSMUSG00000027510.18	Rbm38	chr2	protein_coding	RNA binding motif protein 38
chr2	172952798	172955172	+	172952798	172971020	A3SS	0.5	50	50	ENSMUST00000142207.8	ENSMUSG00000087382.8	Ctcflos	chr2	lncRNA	CCCTC-binding factor (zinc finger protein)-like, opposite strand
chr2	172965875	172971020	+	172952798	172971020	A5SS	0.33	50	50	ENSMUST00000142207.8	ENSMUSG00000087382.8	Ctcflos	chr2	lncRNA	CCCTC-binding factor (zinc finger protein)-like, opposite strand
chr2	172966708	172971020	+	172952798	172971020	A5SS	0.33	50	50	ENSMUST00000142207.8	ENSMUSG00000087382.8	Ctcflos	chr2	lncRNA	CCCTC-binding factor (zinc finger protein)-like, opposite strand
chr2	172966708	172971020	+	172965875	172971020	A5SS	0.5	50	50	ENSMUST00000142165.2	ENSMUSG00000087382.8	Ctcflos	chr2	lncRNA	CCCTC-binding factor (zinc finger protein)-like, opposite strand
chr2	172995405	172995649	+	172995405	172995728	A3SS	0.5	50	50	ENSMUST00000029017.6	ENSMUSG00000027513.12	Pck1	chr2	protein_coding	phosphoenolpyruvate carboxykinase 1, cytosolic
chr2	173055702	173057470	-	173054059	173057470	A3SS	0.5	50	50	ENSMUST00000029018.14	ENSMUSG00000027514.15	Zbp1	chr2	protein_coding	Z-DNA binding protein 1
chr2	173076254;173113473	173113360;173117881	-	173076254	173117881	cassetteExon	0.5	100	100	ENSMUST00000036248.13	ENSMUSG00000038400.16	Pmepa1	chr2	protein_coding	prostate transmembrane protein, androgen induced 1
chr2	173414415	173419829	-	173414415	173419783	A5SS	0.5	50	50	ENSMUST00000119453.9	ENSMUSG00000027517.15	Ankrd60	chr2	protein_coding	ankyrin repeat domain 60
chr2	173438980	173450526	-	173438980;173441480	173441383;173450526	ES	0.33	50	50	ENSMUST00000141051.8	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173450672	173501116	-	173450672;173458216	173457276;173501116	ES	0.25	50	50	ENSMUST00000141051.8	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173431741;173432253	173432159;173434595	-	173431741;173434014	173433910;173434595	MXE	0.5	100	100	ENSMUST00000141051.8	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173431741;173432589	173432159;173433910	-	173431741	173433910	cassetteExon	0.5	100	100	ENSMUST00000141051.8	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173438980;173442835	173442559;173450526	-	173438980;173441480	173441383;173450526	MXE	0.5	100	100	ENSMUST00000141051.8	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173450672;173487351	173487250;173501116	-	173450672;173458216	173457276;173501116	MXE	0.5	100	100	ENSMUST00000141051.8	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173438980;173491160	173490963;173501306	-	173438980;173501160	173441383;173501306	MXE	0.5	100	100	ENSMUST00000141051.8	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173423096	173423765	-	173423089	173423765	A3SS	0.5	50	50	ENSMUST00000141051.8	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173427268	173429626	-	173428908	173429626	A3SS&ES	0.5	50	50	ENSMUST00000141051.8	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173431081	173431298	-	173431043	173431298	A3SS	0.5	50	50	ENSMUST00000141051.8	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173434126	173434595	-	173434014	173434595	A3SS	0.33	50	50	ENSMUST00000141051.8	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173438192	173438833	-	173434807	173438833	A3SS	0.33	50	50	ENSMUST00000141051.8	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173438320	173438833	-	173434807	173438833	A3SS	0.33	50	50	ENSMUST00000141051.8	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173440796	173441383	-	173438980	173441383	A3SS	0.5	50	50	ENSMUST00000141051.8	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173457369	173501116	-	173458216	173501116	A3SS	0.25	50	50	ENSMUST00000141051.8	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173423906	173426212	-	173423906	173428790	A5SS	0.5	50	50	ENSMUST00000141051.8	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173434807	173436546	-	173434807	173438833	A5SS	0.33	50	50	ENSMUST00000141051.8	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173434807	173436769	-	173434807	173438833	A5SS	0.33	50	50	ENSMUST00000141051.8	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173434807	173436769	-	173434807;173436657	173436546;173436769	ES	0.5	50	50	ENSMUST00000151763.8	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173450672	173501116	-	173450672;173457369	173457276;173501116	ES	0.25	50	50	ENSMUST00000151763.8	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173450672;173487351	173487250;173501116	-	173450672;173457369	173457276;173501116	MXE	0.5	100	100	ENSMUST00000151763.8	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173431741	173433910	-	173432589	173433910	A3SS	0.5	50	50	ENSMUST00000151763.8	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173432253	173434595	-	173434126	173434595	A3SS&ES	0.33	50	50	ENSMUST00000151763.8	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173457369	173458642	-	173457369	173501116	A5SS	0.5	50	50	ENSMUST00000151763.8	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173423906;173428908	173428790;173429626	-	173423906;173427268	173426212;173429626	MXE	0.5	100	100	ENSMUST00000132669.8	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173431741;173434126	173433910;173434595	-	173431741;173432253	173432159;173434595	MXE	0.5	100	100	ENSMUST00000132669.8	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173438192	173438833	-	173438320	173438833	A3SS	0.33	50	50	ENSMUST00000132669.8	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173442835	173450526	-	173441480	173450526	A3SS	0.33	50	50	ENSMUST00000132669.8	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173450672	173501116	-	173450672;173487351	173487250;173501116	ES	0.25	50	50	ENSMUST00000148111.2	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173438980;173442835	173442559;173450526	-	173438980	173450526	cassetteExon	0.5	100	100	ENSMUST00000148111.2	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173458216	173501116	-	173487351	173501116	A3SS&ES	0.25	50	50	ENSMUST00000148111.2	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173438980	173490963	-	173438980	173450526	A5SS&ES	0.25	50	50	ENSMUST00000148111.2	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173438980;173491160	173490963;173501306	-	173438980;173501160	173450526;173501306	MXE	0.5	100	100	ENSMUST00000142320.8	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173501160	173501306	-	173491160	173501306	A3SS	0.5	50	50	ENSMUST00000140992.2	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173438980	173441383	-	173438980	173490963	A5SS	0.25	50	50	ENSMUST00000140992.2	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173438980	173442559	-	173438980	173490963	A5SS	0.25	50	50	ENSMUST00000140992.2	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173458216	173501116	-	173450672	173501116	A3SS	0.25	50	50	ENSMUST00000148213.2	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173450672	173501116	-	173457369	173501116	3pMXE	0.25	50	50	ENSMUST00000133185.2	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173487351	173501116	-	173457369	173501116	A3SS	0.25	50	50	ENSMUST00000133185.2	ENSMUSG00000055897.14	Ppp4r1l-ps	chr2	transcribed_unprocessed_pseudogene	protein phosphatase 4, regulatory subunit 1-like, pseudogene
chr2	173503304;173530021	173529940;173536903	+	173503304	173536903	cassetteExon	0.5	100	100	ENSMUST00000142820.8	ENSMUSG00000027519.11	Rab22a	chr2	protein_coding	RAB22A, member RAS oncogene family
chr2	173530021	173537001	+	173530021	173536903	A3SS&ES	0.5	50	50	ENSMUST00000029024.10	ENSMUSG00000027519.11	Rab22a	chr2	protein_coding	RAB22A, member RAS oncogene family
chr2	173503304	173536903	+	173503304	173529940	A3SS&ES	0.5	50	50	ENSMUST00000109110.4	ENSMUSG00000027519.11	Rab22a	chr2	protein_coding	RAB22A, member RAS oncogene family
chr2	173610094	173613314	+	173604062	173613314	A5SS	0.5	50	50	ENSMUST00000067530.6	ENSMUSG00000054455.6	Vapb	chr2	protein_coding	vesicle-associated membrane protein, associated protein B and C
chr2	173918175;173918982	173918917;173932414	+	173918175	173932414	cassetteExon	0.5	100	100	ENSMUST00000155000.8	ENSMUSG00000027522.16	Stx16	chr2	protein_coding	syntaxin 16
chr2	173918175;173919145	173918917;173932414	+	173918175	173932414	cassetteExon	0.5	100	100	ENSMUST00000155000.8	ENSMUSG00000027522.16	Stx16	chr2	protein_coding	syntaxin 16
chr2	173926450	173932414	+	173918175	173932414	A5SS	0.25	50	50	ENSMUST00000155000.8	ENSMUSG00000027522.16	Stx16	chr2	protein_coding	syntaxin 16
chr2	173918982;173919145	173919131;173932414	+	173918982	173932414	cassetteExon	0.5	100	100	ENSMUST00000134876.8	ENSMUSG00000027522.16	Stx16	chr2	protein_coding	syntaxin 16
chr2	173918982;173926450	173926439;173932414	+	173918982	173932414	cassetteExon	0.5	100	100	ENSMUST00000134876.8	ENSMUSG00000027522.16	Stx16	chr2	protein_coding	syntaxin 16
chr2	173918175	173918917	+	173918165	173918917	A5SS	0.5	50	50	ENSMUST00000134876.8	ENSMUSG00000027522.16	Stx16	chr2	protein_coding	syntaxin 16
chr2	173918175	173932414	+	173918982	173932414	A5SS&ES	0.25	50	50	ENSMUST00000134876.8	ENSMUSG00000027522.16	Stx16	chr2	protein_coding	syntaxin 16
chr2	173918982;173919145	173919131;173932414	+	173918982;173926450	173926439;173932414	MXE	0.5	100	100	ENSMUST00000147038.8	ENSMUSG00000027522.16	Stx16	chr2	protein_coding	syntaxin 16
chr2	173935318	173936853	+	173935318;173935865	173935722;173936853	ES	0.5	50	50	ENSMUST00000087908.10	ENSMUSG00000027522.16	Stx16	chr2	protein_coding	syntaxin 16
chr2	173957986;173961452	173961298;173962020	+	173957986;173961263	173961186;173962020	MXE	0.5	100	100	ENSMUST00000044415.16	ENSMUSG00000039263.17	Npepl1	chr2	protein_coding	aminopeptidase-like 1
chr2	174125217	174126253	-	174125199	174126253	A3SS	0.5	50	50	ENSMUST00000151472.8	ENSMUSG00000086537.8	Gnasas1	chr2	lncRNA	GNAS antisense RNA 1
chr2	174130379	174176005	+	174130379	174137789	3pMXE	0.5	50	50	ENSMUST00000109095.8	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174178584	174183446	+	174178584	174179414	3pMXE	0.5	50	50	ENSMUST00000180362.8	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174127270;174130379	174130284;174176005	+	174127270	174176005	cassetteExon	0.5	100	100	ENSMUST00000180362.8	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174142010	174176005	+	174127270	174176005	A5SS	0.12	50	50	ENSMUST00000180362.8	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174142318	174176005	+	174127270	174176005	A5SS	0.12	50	50	ENSMUST00000180362.8	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174169734	174176005	+	174127270	174176005	A5SS	0.12	50	50	ENSMUST00000180362.8	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174169924	174176005	+	174127270	174176005	A5SS	0.12	50	50	ENSMUST00000180362.8	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174172193	174176005	+	174127270	174176005	A5SS	0.12	50	50	ENSMUST00000180362.8	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174172227	174176005	+	174127270	174176005	A5SS	0.12	50	50	ENSMUST00000180362.8	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174176077	174183446	+	174176077;174178584	174178540;174183446	ES	0.5	50	50	ENSMUST00000109096.9	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174176077	174183443	+	174176077	174178540	A3SS&ES	0.33	50	50	ENSMUST00000109096.9	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174186169	174186868	+	174185090	174186868	A5SS	0.33	50	50	ENSMUST00000109096.9	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174186224	174186868	+	174185090	174186868	A5SS	0.33	50	50	ENSMUST00000109096.9	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174142010	174176005	+	174130379	174176005	A5SS	0.12	50	50	ENSMUST00000130940.8	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174142318	174176005	+	174130379	174176005	A5SS	0.12	50	50	ENSMUST00000130940.8	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174169734	174176005	+	174130379	174176005	A5SS	0.12	50	50	ENSMUST00000130940.8	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174169924	174176005	+	174130379	174176005	A5SS	0.12	50	50	ENSMUST00000130940.8	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174172193	174176005	+	174130379	174176005	A5SS	0.12	50	50	ENSMUST00000130940.8	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174172227	174176005	+	174130379	174176005	A5SS	0.12	50	50	ENSMUST00000130940.8	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174142010	174176005	+	174142010	174142224	3pMXE	0.5	50	50	ENSMUST00000087877.11	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174142010;174142318	174142224;174176005	+	174142010	174176005	cassetteExon	0.5	100	100	ENSMUST00000080493.12	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174169734	174176005	+	174142010	174176005	A5SS	0.12	50	50	ENSMUST00000080493.12	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174169924	174176005	+	174142010	174176005	A5SS	0.12	50	50	ENSMUST00000080493.12	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174172193	174176005	+	174142010	174176005	A5SS	0.12	50	50	ENSMUST00000080493.12	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174172227	174176005	+	174142010	174176005	A5SS	0.12	50	50	ENSMUST00000080493.12	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174169734	174176005	+	174142318	174176005	A5SS	0.16	50	50	ENSMUST00000154658.8	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174169924	174176005	+	174142318	174176005	A5SS	0.16	50	50	ENSMUST00000154658.8	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174172193	174176005	+	174142318	174176005	A5SS	0.16	50	50	ENSMUST00000154658.8	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174172227	174176005	+	174142318	174176005	A5SS	0.16	50	50	ENSMUST00000154658.8	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174176077	174183446	+	174176077	174183443	A3SS	0.33	50	50	ENSMUST00000087876.11	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174169734;174169924	174169901;174176005	+	174169734	174176005	cassetteExon	0.5	100	100	ENSMUST00000124935.8	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174172193	174176005	+	174169734	174176005	A5SS	0.12	50	50	ENSMUST00000124935.8	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174172227	174176005	+	174169734	174176005	A5SS	0.12	50	50	ENSMUST00000124935.8	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174169924	174170160	+	174169924	174176005	A3SS	0.5	50	50	ENSMUST00000156623.8	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174172193	174176005	+	174169924	174176005	A5SS	0.25	50	50	ENSMUST00000156623.8	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174172227	174176005	+	174169924	174176005	A5SS	0.25	50	50	ENSMUST00000156623.8	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174169734	174176005	+	174169734;174172227	174169901;174176005	ES	0.25	50	50	ENSMUST00000087871.11	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174172193	174176005	+	174172227	174176005	A5SS	0.25	50	50	ENSMUST00000087871.11	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174169734	174176005	+	174169924	174176005	5pMXE	0.12	50	50	ENSMUST00000148640.8	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174186169	174186868	+	174186224	174186868	A5SS	0.33	50	50	ENSMUST00000238660.2	ENSMUSG00000027523.21	Gnas	chr2	protein_coding	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr2	174264467	174264797	+	174264467	174264845	A3SS	0.5	50	50	ENSMUST00000109075.8	ENSMUSG00000016253.13	Nelfcd	chr2	protein_coding	negative elongation factor complex member C/D, Th1l
chr2	174257827	174261820	+	174257749	174261820	A5SS	0.5	50	50	ENSMUST00000109075.8	ENSMUSG00000016253.13	Nelfcd	chr2	protein_coding	negative elongation factor complex member C/D, Th1l
chr2	174265970	174266399	+	174265941	174266399	A5SS	0.5	50	50	ENSMUST00000109075.8	ENSMUSG00000016253.13	Nelfcd	chr2	protein_coding	negative elongation factor complex member C/D, Th1l
chr2	174304422	174305595	-	174304422	174305758	A5SS	0.5	50	50	ENSMUST00000016396.8	ENSMUSG00000016252.8	Atp5e	chr2	protein_coding	ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
chr2	174310180	174314625	-	174310180;174311298	174311130;174314625	ES	0.25	50	50	ENSMUST00000016401.15	ENSMUSG00000016257.16	Prelid3b	chr2	protein_coding	PRELI domain containing 3B
chr2	174311298;174312771	174312642;174314625	-	174311298	174314625	cassetteExon	0.5	100	100	ENSMUST00000016401.15	ENSMUSG00000016257.16	Prelid3b	chr2	protein_coding	PRELI domain containing 3B
chr2	174310192	174314625	-	174311298	174314625	A3SS&ES	0.25	50	50	ENSMUST00000016401.15	ENSMUSG00000016257.16	Prelid3b	chr2	protein_coding	PRELI domain containing 3B
chr2	174310192	174314625	-	174310180	174314625	A3SS	0.25	50	50	ENSMUST00000117442.8	ENSMUSG00000016257.16	Prelid3b	chr2	protein_coding	PRELI domain containing 3B
chr2	174312771	174314625	-	174310180	174314625	A3SS	0.25	50	50	ENSMUST00000117442.8	ENSMUSG00000016257.16	Prelid3b	chr2	protein_coding	PRELI domain containing 3B
chr2	174312771	174314625	-	174310192	174314625	A3SS	0.25	50	50	ENSMUST00000120822.2	ENSMUSG00000016257.16	Prelid3b	chr2	protein_coding	PRELI domain containing 3B
chr2	174310180	174314625	-	174311298	174314625	3pMXE	0.25	50	50	ENSMUST00000147944.2	ENSMUSG00000016257.16	Prelid3b	chr2	protein_coding	PRELI domain containing 3B
chr2	174602811	174603438	+	174602811	174603306	A3SS	0.5	50	50	ENSMUST00000029030.9	ENSMUSG00000027524.10	Edn3	chr2	protein_coding	endothelin 3
chr2	174620557	174621491	+	174620557	174621479	A3SS	0.5	50	50	ENSMUST00000029030.9	ENSMUSG00000027524.10	Edn3	chr2	protein_coding	endothelin 3
chr2	174612249	174620381	+	174603618	174620381	A5SS	0.5	50	50	ENSMUST00000029030.9	ENSMUSG00000027524.10	Edn3	chr2	protein_coding	endothelin 3
chr2	174679960	174680436	-	174679960	174680381	A5SS	0.5	50	50	ENSMUST00000128053.2	ENSMUSG00000084795.2	Gm14617	chr2	lncRNA	predicted gene 14617
chr2	174852114	174858431	+	174852114;174855275	174855221;174858431	ES	0.5	50	50	ENSMUST00000109069.8	ENSMUSG00000078906.10	Gm14444	chr2	protein_coding	predicted gene 14444
chr2	174973562;174974782	174974722;174974989	-	174973562	174974989	cassetteExon	0.5	100	100	ENSMUST00000109062.8	ENSMUSG00000090093.9	Gm14399	chr2	protein_coding	predicted gene 14399
chr2	174973562	174974989	-	174974782	174974989	3pMXE	0.5	50	50	ENSMUST00000109059.8	ENSMUSG00000090093.9	Gm14399	chr2	protein_coding	predicted gene 14399
chr2	175012253	175013388	-	175008952	175013388	A3SS	0.5	50	50	ENSMUST00000127251.2	ENSMUSG00000078902.4	Gm14443	chr2	protein_coding	predicted gene 14443
chr2	175039726;175043547	175043446;175044852	-	175039726	175044852	cassetteExon	0.5	100	100	ENSMUST00000099028.10	ENSMUSG00000078903.11	Gm14391	chr2	protein_coding	predicted gene 14391
chr2	175038180	175039338	-	175032964	175039338	A3SS	0.5	50	50	ENSMUST00000099028.10	ENSMUSG00000078903.11	Gm14391	chr2	protein_coding	predicted gene 14391
chr2	175214366	175222573	+	175214366;175222366	175222240;175222573	ES	0.5	50	50	ENSMUST00000131676.8	ENSMUSG00000078898.10	Zfp968	chr2	protein_coding	zinc finger protein 968
chr2	175222633	175223787	+	175222633	175225435	A3SS	0.5	50	50	ENSMUST00000109048.3	ENSMUSG00000078898.10	Zfp968	chr2	protein_coding	zinc finger protein 968
chr2	175266948;175272667	175272566;175273973	-	175266948	175273973	cassetteExon	0.5	100	100	ENSMUST00000109046.10	ENSMUSG00000078897.11	Gm4724	chr2	protein_coding	predicted gene 4724
chr2	175311915	175320125	+	175311915;175319918	175319792;175320125	ES	0.5	50	50	ENSMUST00000109042.10	ENSMUSG00000078896.12	Zfp965	chr2	protein_coding	zinc finger protein 965
chr2	175320185	175323070	+	175320185	175321338	3pMXE	0.33	50	50	ENSMUST00000109002.9	ENSMUSG00000078896.12	Zfp965	chr2	protein_coding	zinc finger protein 965
chr2	175320185	175323916	+	175320185	175321338	3pMXE	0.33	50	50	ENSMUST00000109002.9	ENSMUSG00000078896.12	Zfp965	chr2	protein_coding	zinc finger protein 965
chr2	175320185	175323916	+	175320185	175323070	3pMXE	0.33	50	50	ENSMUST00000109043.9	ENSMUSG00000078896.12	Zfp965	chr2	protein_coding	zinc finger protein 965
chr2	175487173;175487506	175487380;175495380	-	175487173	175495380	cassetteExon	0.5	100	100	ENSMUST00000109027.9	ENSMUSG00000095545.8	Zfp969	chr2	protein_coding	zinc finger protein 969
chr2	175485959	175487113	-	175484311	175487113	A3SS	0.5	50	50	ENSMUST00000109027.9	ENSMUSG00000095545.8	Zfp969	chr2	protein_coding	zinc finger protein 969
chr2	175664896;175666302	175666201;175670022	+	175664896	175670022	cassetteExon	0.5	100	100	ENSMUST00000109011.8	ENSMUSG00000078887.11	Gm6710	chr2	protein_coding	predicted gene 6710
chr2	175714575	175722782	-	175714575;175714908	175714782;175722782	ES	0.5	50	50	ENSMUST00000108949.3	ENSMUSG00000089756.3	Zfp966	chr2	protein_coding	zinc finger protein 966
chr2	175711713	175714515	-	175713361	175714515	A3SS	0.5	50	50	ENSMUST00000108949.3	ENSMUSG00000089756.3	Zfp966	chr2	protein_coding	zinc finger protein 966
chr2	175768154	175769312	+	175768154	175771864	A3SS	0.5	50	50	ENSMUST00000174416.8	ENSMUSG00000078886.13	Gm2026	chr2	protein_coding	predicted gene 2026
chr2	175971972;175973375	175973274;175977112	+	175971972	175977112	cassetteExon	0.5	100	100	ENSMUST00000099009.9	ENSMUSG00000078894.10	2210418O10Rik	chr2	protein_coding	RIKEN cDNA 2210418O10 gene
chr2	176175005	176178491	-	176175005	176178463	A5SS	0.5	50	50	ENSMUST00000120959.8	ENSMUSG00000078881.11	Gm14434	chr2	protein_coding	predicted gene 14434
chr2	176212908	176221115	+	176212908;176220908	176220782;176221115	ES	0.5	50	50	ENSMUST00000238585.2	ENSMUSG00000095199.9	Zfp967	chr2	protein_coding	zinc finger protein 967
chr2	176221175	176222329	+	176221175	176225074	A3SS	0.2	50	50	ENSMUST00000238585.2	ENSMUSG00000095199.9	Zfp967	chr2	protein_coding	zinc finger protein 967
chr2	176221175	176223977	+	176221175	176225074	A3SS	0.2	50	50	ENSMUST00000238585.2	ENSMUSG00000095199.9	Zfp967	chr2	protein_coding	zinc finger protein 967
chr2	176221175	176225042	+	176221175	176225074	A3SS	0.2	50	50	ENSMUST00000238585.2	ENSMUSG00000095199.9	Zfp967	chr2	protein_coding	zinc finger protein 967
chr2	176221175	176225048	+	176221175	176225074	A3SS	0.2	50	50	ENSMUST00000238585.2	ENSMUSG00000095199.9	Zfp967	chr2	protein_coding	zinc finger protein 967
chr2	176221175	176222329	+	176221175	176225042	A3SS	0.2	50	50	ENSMUST00000238250.2	ENSMUSG00000095199.9	Zfp967	chr2	protein_coding	zinc finger protein 967
chr2	176221175	176223977	+	176221175	176225042	A3SS	0.2	50	50	ENSMUST00000238250.2	ENSMUSG00000095199.9	Zfp967	chr2	protein_coding	zinc finger protein 967
chr2	176221175	176225048	+	176221175	176225042	A3SS	0.2	50	50	ENSMUST00000238250.2	ENSMUSG00000095199.9	Zfp967	chr2	protein_coding	zinc finger protein 967
chr2	176221175	176223977	+	176221175	176222329	3pMXE	0.2	50	50	ENSMUST00000238206.2	ENSMUSG00000095199.9	Zfp967	chr2	protein_coding	zinc finger protein 967
chr2	176221175	176225048	+	176221175	176222329	3pMXE	0.2	50	50	ENSMUST00000238206.2	ENSMUSG00000095199.9	Zfp967	chr2	protein_coding	zinc finger protein 967
chr2	176221175	176225048	+	176221175	176223977	3pMXE	0.2	50	50	ENSMUST00000108997.10	ENSMUSG00000095199.9	Zfp967	chr2	protein_coding	zinc finger protein 967
chr2	176315940	176317098	-	176305720	176317098	A3SS	0.5	50	50	ENSMUST00000126807.2	ENSMUSG00000078880.11	Gm14308	chr2	protein_coding	predicted gene 14308
chr2	176324569	176328061	-	176324569	176328033	A5SS	0.5	50	50	ENSMUST00000108990.9	ENSMUSG00000078880.11	Gm14308	chr2	protein_coding	predicted gene 14308
chr2	176370722	176398647	+	176370722	176371875	3pMXE	0.5	50	50	ENSMUST00000108985.9	ENSMUSG00000078879.11	Zfp973	chr2	protein_coding	zinc finger protein 973
chr2	176400217	176403674	+	176400189	176403674	A5SS	0.5	50	50	ENSMUST00000141122.2	ENSMUSG00000078879.11	Zfp973	chr2	protein_coding	zinc finger protein 973
chr2	176403728	176410750	+	176403729	176410750	A5SS	0.5	50	50	ENSMUST00000141122.2	ENSMUSG00000078879.11	Zfp973	chr2	protein_coding	zinc finger protein 973
chr2	176526805;176527059	176526999;176528307	+	176526805	176528307	cassetteExon	0.5	100	100	ENSMUST00000126726.2	ENSMUSG00000078876.11	Gm14408	chr2	protein_coding	predicted gene 14408
chr2	176610852;176614690	176614589;176615992	-	176610852	176615992	cassetteExon	0.5	100	100	ENSMUST00000134982.8	ENSMUSG00000074527.12	Gm14296	chr2	protein_coding	predicted gene 14296
chr2	176609304	176610460	-	176594653	176610460	A3SS	0.5	50	50	ENSMUST00000134982.8	ENSMUSG00000074527.12	Gm14296	chr2	protein_coding	predicted gene 14296
chr2	176701867	176703023	+	176701867	176702429	3pMXE	0.5	50	50	ENSMUST00000108975.9	ENSMUSG00000078875.11	Gm14419	chr2	protein_coding	predicted gene 14419
chr2	176776162	176778107	+	176776162;176776429	176776369;176778107	ES	0.5	50	50	ENSMUST00000108970.9	ENSMUSG00000078872.10	Gm14401	chr2	protein_coding	predicted gene 14401
chr2	176772112	176776036	+	176766151	176776036	A5SS	0.5	50	50	ENSMUST00000108970.9	ENSMUSG00000078872.10	Gm14401	chr2	protein_coding	predicted gene 14401
chr2	176776162	176778107	+	176776162	176776369	3pMXE	0.5	50	50	ENSMUST00000108968.2	ENSMUSG00000078872.10	Gm14401	chr2	protein_coding	predicted gene 14401
chr2	176886071	176887229	-	176875809	176887229	A3SS	0.5	50	50	ENSMUST00000156269.2	ENSMUSG00000078870.10	Gm14410	chr2	protein_coding	predicted gene 14410
chr2	177085188	177086490	-	177081346	177086490	A3SS	0.5	50	50	ENSMUST00000128657.8	ENSMUSG00000078867.10	Gm14418	chr2	protein_coding	predicted gene 14418
chr2	177081346	177081615	-	177081346	177086490	A5SS	0.5	50	50	ENSMUST00000128657.8	ENSMUSG00000078867.10	Gm14418	chr2	protein_coding	predicted gene 14418
chr2	177165471	177166619	+	177165471	177169433	A3SS	0.5	50	50	ENSMUST00000099002.10	ENSMUSG00000078866.11	Zfp970	chr2	protein_coding	zinc finger protein 970
chr2	177190110	177198702	+	177190110;177193590	177193536;177198702	ES	0.5	50	50	ENSMUST00000142549.2	ENSMUSG00000094786.2	Gm14403	chr2	protein_coding	predicted gene 14403
chr2	177198828;177199096	177199036;177200247	+	177198828	177200247	cassetteExon	0.5	100	100	ENSMUST00000142549.2	ENSMUSG00000094786.2	Gm14403	chr2	protein_coding	predicted gene 14403
chr2	177263606;177266816	177266762;177269923	-	177263606	177269923	cassetteExon	0.5	100	100	ENSMUST00000108945.8	ENSMUSG00000078865.9	Gm14406	chr2	protein_coding	predicted gene 14406
chr2	177404693	177409837	+	177404693;177409568	177409532;177409837	ES	0.5	50	50	ENSMUST00000148388.2	ENSMUSG00000078864.11	Gm14322	chr2	protein_coding	predicted gene 14322
chr2	177563288	177563482	-	177545520	177563482	A3SS	0.5	50	50	ENSMUST00000108934.9	ENSMUSG00000074529.11	Zfp972	chr2	protein_coding	zinc finger protein 972
chr2	177588803	177589963	-	177578349	177589963	A3SS	0.5	50	50	ENSMUST00000108932.8	ENSMUSG00000078862.11	Gm14326	chr2	protein_coding	predicted gene 14326
chr2	177710193	177711616	-	177710193;177711408	177711348;177711616	ES	0.5	50	50	ENSMUST00000108924.9	ENSMUSG00000078861.9	Zfp931	chr2	protein_coding	zinc finger protein 931
chr2	177710193	177711616	-	177711408	177711616	3pMXE	0.5	50	50	ENSMUST00000108923.2	ENSMUSG00000078861.9	Zfp931	chr2	protein_coding	zinc finger protein 931
chr2	177944631	177969931	+	177944631	177969934	A3SS	0.5	50	50	ENSMUST00000108917.8	ENSMUSG00000027525.19	Phactr3	chr2	protein_coding	phosphatase and actin regulator 3
chr2	177784292	177897906	+	177761095	177897906	A5SS	0.25	50	50	ENSMUST00000108917.8	ENSMUSG00000027525.19	Phactr3	chr2	protein_coding	phosphatase and actin regulator 3
chr2	177817303	177897906	+	177761095	177897906	A5SS	0.25	50	50	ENSMUST00000108917.8	ENSMUSG00000027525.19	Phactr3	chr2	protein_coding	phosphatase and actin regulator 3
chr2	177834986	177897906	+	177761095	177897906	A5SS	0.25	50	50	ENSMUST00000108917.8	ENSMUSG00000027525.19	Phactr3	chr2	protein_coding	phosphatase and actin regulator 3
chr2	177817303	177897906	+	177784292	177897906	A5SS	0.25	50	50	ENSMUST00000103066.10	ENSMUSG00000027525.19	Phactr3	chr2	protein_coding	phosphatase and actin regulator 3
chr2	177834986	177897906	+	177784292	177897906	A5SS	0.25	50	50	ENSMUST00000103066.10	ENSMUSG00000027525.19	Phactr3	chr2	protein_coding	phosphatase and actin regulator 3
chr2	177834986	177897906	+	177817303	177897906	A5SS	0.25	50	50	ENSMUST00000108915.8	ENSMUSG00000027525.19	Phactr3	chr2	protein_coding	phosphatase and actin regulator 3
chr2	177989447	177990015	-	177989447;177989627	177989569;177990015	ES	0.5	50	50	ENSMUST00000081134.10	ENSMUSG00000060445.12	Sycp2	chr2	protein_coding	synaptonemal complex protein 2
chr2	178010303	178016148	-	178010303;178011188	178011061;178016148	ES	0.5	50	50	ENSMUST00000081134.10	ENSMUSG00000060445.12	Sycp2	chr2	protein_coding	synaptonemal complex protein 2
chr2	177991885	177992624	-	177991920	177992624	A3SS	0.5	50	50	ENSMUST00000081134.10	ENSMUSG00000060445.12	Sycp2	chr2	protein_coding	synaptonemal complex protein 2
chr2	178046499	178049192	-	178046499	178049340	A5SS	0.5	50	50	ENSMUST00000081134.10	ENSMUSG00000060445.12	Sycp2	chr2	protein_coding	synaptonemal complex protein 2
chr2	178010303	178016148	-	178011188	178016148	3pMXE	0.5	50	50	ENSMUST00000132765.2	ENSMUSG00000060445.12	Sycp2	chr2	protein_coding	synaptonemal complex protein 2
chr2	178056519	178058425	+	178056501	178058425	A5SS	0.5	50	50	ENSMUST00000094251.11	ENSMUSG00000070476.11	Fam217b	chr2	protein_coding	family with sequence similarity 217, member B
chr2	178114245;178119492	178119436;178123413	+	178114245	178123413	cassetteExon	0.5	100	100	ENSMUST00000108912.9	ENSMUSG00000039155.16	Cdh26	chr2	protein_coding	cadherin-like 26
chr2	179086274	179086493	+	179084471	179086493	A5SS	0.5	50	50	ENSMUST00000000314.13	ENSMUSG00000000305.13	Cdh4	chr2	protein_coding	cadherin 4
chr2	179419053	179422047	+	179086604	179422047	A5SS	0.5	50	50	ENSMUST00000000314.13	ENSMUSG00000000305.13	Cdh4	chr2	protein_coding	cadherin 4
chr2	179563851	179564747	-	179563760	179564747	A3SS	0.5	50	50	ENSMUST00000041618.13	ENSMUSG00000039117.17	Taf4	chr2	protein_coding	TATA-box binding protein associated factor 4
chr2	179563760	179563852	-	179563760	179564747	A5SS	0.5	50	50	ENSMUST00000041618.13	ENSMUSG00000039117.17	Taf4	chr2	protein_coding	TATA-box binding protein associated factor 4
chr2	179571217	179573809	-	179571217	179573773	A5SS	0.5	50	50	ENSMUST00000041618.13	ENSMUSG00000039117.17	Taf4	chr2	protein_coding	TATA-box binding protein associated factor 4
chr2	179618985	179619242	+	179617847	179619242	A5SS	0.5	50	50	ENSMUST00000153188.2	ENSMUSG00000085704.2	4921531C22Rik	chr2	lncRNA	RIKEN cDNA 4921531C22 gene
chr2	179673321	179673854	+	179673321;179673664	179673587;179673854	ES	0.5	50	50	ENSMUST00000055485.12	ENSMUSG00000039108.15	Lsm14b	chr2	protein_coding	LSM family member 14B
chr2	179669828;179670867	179670751;179673154	+	179669828	179673154	cassetteExon	0.5	100	100	ENSMUST00000055485.12	ENSMUSG00000039108.15	Lsm14b	chr2	protein_coding	LSM family member 14B
chr2	179678632	179678731	-	179678366	179678731	A3SS	0.5	50	50	ENSMUST00000126021.8	ENSMUSG00000027566.16	Psma7	chr2	protein_coding	proteasome subunit alpha 7
chr2	179681272	179684071	-	179681272	179683432	A5SS	0.5	50	50	ENSMUST00000126021.8	ENSMUSG00000027566.16	Psma7	chr2	protein_coding	proteasome subunit alpha 7
chr2	179724026	179725138	+	179724553	179725138	A5SS	0.5	50	50	ENSMUST00000147264.8	ENSMUSG00000039069.20	Mtg2	chr2	protein_coding	mitochondrial ribosome associated GTPase 2
chr2	179726105	179726244	+	179726075	179726244	A5SS	0.5	50	50	ENSMUST00000147264.8	ENSMUSG00000039069.20	Mtg2	chr2	protein_coding	mitochondrial ribosome associated GTPase 2
chr2	179713679	179714933	+	179713679	179720412	A3SS	0.5	50	50	ENSMUST00000108901.8	ENSMUSG00000039069.20	Mtg2	chr2	protein_coding	mitochondrial ribosome associated GTPase 2
chr2	179719935	179720412	+	179713679	179720412	A5SS	0.5	50	50	ENSMUST00000108901.8	ENSMUSG00000039069.20	Mtg2	chr2	protein_coding	mitochondrial ribosome associated GTPase 2
chr2	179744688	179745699	-	179744688	179745695	A5SS	0.5	50	50	ENSMUST00000056480.10	ENSMUSG00000039059.12	Hrh3	chr2	protein_coding	histamine receptor H3
chr2	179742373	179742806	-	179742709	179742806	A3SS&ES	0.33	50	50	ENSMUST00000163215.8	ENSMUSG00000039059.12	Hrh3	chr2	protein_coding	histamine receptor H3
chr2	179742661	179742806	-	179742709	179742806	A3SS	0.33	50	50	ENSMUST00000163215.8	ENSMUSG00000039059.12	Hrh3	chr2	protein_coding	histamine receptor H3
chr2	179742373	179742806	-	179742661	179742806	A3SS	0.33	50	50	ENSMUST00000165248.8	ENSMUSG00000039059.12	Hrh3	chr2	protein_coding	histamine receptor H3
chr2	179761262;179765291	179765186;179778772	+	179761262	179778772	cassetteExon	0.5	100	100	ENSMUST00000040668.9	ENSMUSG00000039050.9	Osbpl2	chr2	protein_coding	oxysterol binding protein-like 2
chr2	179816739	179817036	+	179816739	179816953	A3SS	0.5	50	50	ENSMUST00000061437.5	ENSMUSG00000039041.16	Adrm1	chr2	protein_coding	adhesion regulating molecule 1
chr2	179814765	179816658	+	179814765	179815703	A3SS	0.5	50	50	ENSMUST00000128029.8	ENSMUSG00000039041.16	Adrm1	chr2	protein_coding	adhesion regulating molecule 1
chr2	179814765	179816658	+	179816188	179816658	A5SS&ES	0.5	50	50	ENSMUST00000152540.8	ENSMUSG00000039041.16	Adrm1	chr2	protein_coding	adhesion regulating molecule 1
chr2	179814765;179816188	179815703;179816658	+	179814765	179816658	cassetteExon	0.5	100	100	ENSMUST00000145230.8	ENSMUSG00000039041.16	Adrm1	chr2	protein_coding	adhesion regulating molecule 1
chr2	179820684	179820803	-	179818453	179820803	A3SS	0.5	50	50	ENSMUST00000130796.2	ENSMUSG00000015647.10	Lama5	chr2	protein_coding	laminin, alpha 5
chr2	179906099	179914893	-	179906099;179906267	179906196;179914893	ES	0.5	50	50	ENSMUST00000108891.2	ENSMUSG00000038990.15	Cables2	chr2	protein_coding	CDK5 and Abl enzyme substrate 2
chr2	180107480;180108100	180107998;180108851	+	180107480	180108851	cassetteExon	0.5	100	100	ENSMUST00000038259.13	ENSMUSG00000038963.16	Slco4a1	chr2	protein_coding	solute carrier organic anion transporter family, member 4a1
chr2	180102991	180105734	+	180098166	180105734	A5SS	0.5	50	50	ENSMUST00000038259.13	ENSMUSG00000038963.16	Slco4a1	chr2	protein_coding	solute carrier organic anion transporter family, member 4a1
chr2	180224748	180226199	+	180224748;180225315	180225194;180226199	ES	0.5	50	50	ENSMUST00000169630.8	ENSMUSG00000027569.16	Mrgbp	chr2	protein_coding	MRG/MORF4L binding protein
chr2	180226280	180226487	+	180226280	180226590	A3SS	0.5	50	50	ENSMUST00000169630.8	ENSMUSG00000027569.16	Mrgbp	chr2	protein_coding	MRG/MORF4L binding protein
chr2	180224748	180226199	+	180224748	180225194	A3SS	0.5	50	50	ENSMUST00000149969.2	ENSMUSG00000027569.16	Mrgbp	chr2	protein_coding	MRG/MORF4L binding protein
chr2	180282256	180283769	-	180282256;180282857	180282674;180283769	ES	0.5	50	50	ENSMUST00000037877.11	ENSMUSG00000038932.14	Tcfl5	chr2	protein_coding	transcription factor-like 5 (basic helix-loop-helix)
chr2	180280443	180282094	-	180280440	180282094	A3SS	0.5	50	50	ENSMUST00000037877.11	ENSMUSG00000038932.14	Tcfl5	chr2	protein_coding	transcription factor-like 5 (basic helix-loop-helix)
chr2	180333841	180351703	-	180333841	180343754	5pMXE	0.5	50	50	ENSMUST00000087517.10	ENSMUSG00000038914.16	Dido1	chr2	protein_coding	death inducer-obliterator 1
chr2	180331448;180332426	180332315;180333657	-	180331448	180333657	cassetteExon	0.5	100	100	ENSMUST00000087517.10	ENSMUSG00000038914.16	Dido1	chr2	protein_coding	death inducer-obliterator 1
chr2	180353643	180354984	+	180352143	180354984	A5SS	0.5	50	50	ENSMUST00000029090.9	ENSMUSG00000027573.12	Gid8	chr2	protein_coding	GID complex subunit 8
chr2	180378896	180380202	+	180378896;180379472	180379385;180380202	ES	0.5	50	50	ENSMUST00000094218.4	ENSMUSG00000023393.16	Slc17a9	chr2	protein_coding	solute carrier family 17, member 9
chr2	180375609	180375755	+	180375609	180377636	A3SS	0.5	50	50	ENSMUST00000094218.4	ENSMUSG00000023393.16	Slc17a9	chr2	protein_coding	solute carrier family 17, member 9
chr2	180373800	180374226	+	180373870	180374226	A5SS	0.5	50	50	ENSMUST00000094218.4	ENSMUSG00000023393.16	Slc17a9	chr2	protein_coding	solute carrier family 17, member 9
chr2	180378231	180378480	+	180377766	180378480	A5SS	0.5	50	50	ENSMUST00000094218.4	ENSMUSG00000023393.16	Slc17a9	chr2	protein_coding	solute carrier family 17, member 9
chr2	180378689	180378800	+	180378576	180378800	A5SS	0.5	50	50	ENSMUST00000094218.4	ENSMUSG00000023393.16	Slc17a9	chr2	protein_coding	solute carrier family 17, member 9
chr2	180561007;180561779	180561699;180562105	-	180561007	180562105	cassetteExon	0.5	100	100	ENSMUST00000037299.15	ENSMUSG00000038848.15	Ythdf1	chr2	protein_coding	YTH N6-methyladenosine RNA binding protein 1
chr2	180576822;180577820	180577736;180578944	-	180576822	180578944	cassetteExon	0.5	100	100	ENSMUST00000151494.8	ENSMUSG00000027574.16	Nkain4	chr2	protein_coding	Na+/K+ transporting ATPase interacting 4
chr2	180585020	180585870	-	180585020;180585614	180585534;180585870	ES	0.5	50	50	ENSMUST00000103053.10	ENSMUSG00000027574.16	Nkain4	chr2	protein_coding	Na+/K+ transporting ATPase interacting 4
chr2	180585614	180596364	-	180585614;180586007	180585870;180596364	ES	0.5	50	50	ENSMUST00000103053.10	ENSMUSG00000027574.16	Nkain4	chr2	protein_coding	Na+/K+ transporting ATPase interacting 4
chr2	180586007	180591263	-	180586007	180596364	A5SS	0.33	50	50	ENSMUST00000103053.10	ENSMUSG00000027574.16	Nkain4	chr2	protein_coding	Na+/K+ transporting ATPase interacting 4
chr2	180586007	180595946	-	180586007	180596364	A5SS	0.33	50	50	ENSMUST00000103053.10	ENSMUSG00000027574.16	Nkain4	chr2	protein_coding	Na+/K+ transporting ATPase interacting 4
chr2	180576822	180578944	-	180577820	180578944	3pMXE	0.5	50	50	ENSMUST00000139929.8	ENSMUSG00000027574.16	Nkain4	chr2	protein_coding	Na+/K+ transporting ATPase interacting 4
chr2	180585020;180586007	180585870;180596364	-	180585020;180585614	180585534;180596364	MXE	0.5	100	100	ENSMUST00000139929.8	ENSMUSG00000027574.16	Nkain4	chr2	protein_coding	Na+/K+ transporting ATPase interacting 4
chr2	180586007	180591263	-	180586007	180595946	A5SS	0.33	50	50	ENSMUST00000134231.2	ENSMUSG00000027574.16	Nkain4	chr2	protein_coding	Na+/K+ transporting ATPase interacting 4
chr2	180585020	180585870	-	180585614	180585870	3pMXE	0.5	50	50	ENSMUST00000137274.2	ENSMUSG00000027574.16	Nkain4	chr2	protein_coding	Na+/K+ transporting ATPase interacting 4
chr2	180612907	180613777	+	180612907;180613476	180613367;180613777	ES	0.5	50	50	ENSMUST00000108862.8	ENSMUSG00000027575.20	Arfgap1	chr2	protein_coding	ADP-ribosylation factor GTPase activating protein 1
chr2	180609122;180609607	180609327;180612844	+	180609122	180612844	cassetteExon	0.5	100	100	ENSMUST00000108862.8	ENSMUSG00000027575.20	Arfgap1	chr2	protein_coding	ADP-ribosylation factor GTPase activating protein 1
chr2	180609122;180609607	180609395;180612844	+	180609122	180612844	cassetteExon	0.5	100	100	ENSMUST00000108862.8	ENSMUSG00000027575.20	Arfgap1	chr2	protein_coding	ADP-ribosylation factor GTPase activating protein 1
chr2	180619145;180620234	180620205;180620964	+	180619145	180620964	cassetteExon	0.5	100	100	ENSMUST00000108862.8	ENSMUSG00000027575.20	Arfgap1	chr2	protein_coding	ADP-ribosylation factor GTPase activating protein 1
chr2	180621020;180621513	180621454;180622191	+	180621020	180622191	cassetteExon	0.5	100	100	ENSMUST00000108862.8	ENSMUSG00000027575.20	Arfgap1	chr2	protein_coding	ADP-ribosylation factor GTPase activating protein 1
chr2	180621020	180622197	+	180621020	180622191	A3SS	0.33	50	50	ENSMUST00000108862.8	ENSMUSG00000027575.20	Arfgap1	chr2	protein_coding	ADP-ribosylation factor GTPase activating protein 1
chr2	180622267	180622838	+	180622267	180622830	A3SS	0.5	50	50	ENSMUST00000108862.8	ENSMUSG00000027575.20	Arfgap1	chr2	protein_coding	ADP-ribosylation factor GTPase activating protein 1
chr2	180609122	180609327	+	180609122	180609395	A3SS	0.33	50	50	ENSMUST00000029092.13	ENSMUSG00000027575.20	Arfgap1	chr2	protein_coding	ADP-ribosylation factor GTPase activating protein 1
chr2	180609607	180612807	+	180609607	180612844	A3SS	0.5	50	50	ENSMUST00000029092.13	ENSMUSG00000027575.20	Arfgap1	chr2	protein_coding	ADP-ribosylation factor GTPase activating protein 1
chr2	180621020	180622197	+	180621020	180621454	A3SS&ES	0.33	50	50	ENSMUST00000029092.13	ENSMUSG00000027575.20	Arfgap1	chr2	protein_coding	ADP-ribosylation factor GTPase activating protein 1
chr2	180609122	180612844	+	180609122	180609395	A3SS&ES	0.33	50	50	ENSMUST00000145629.8	ENSMUSG00000027575.20	Arfgap1	chr2	protein_coding	ADP-ribosylation factor GTPase activating protein 1
chr2	180609122	180612844	+	180609607	180612844	A5SS	0.5	50	50	ENSMUST00000108859.8	ENSMUSG00000027575.20	Arfgap1	chr2	protein_coding	ADP-ribosylation factor GTPase activating protein 1
chr2	180643136	180645138	+	180643136;180644160	180644122;180645138	ES	0.5	50	50	ENSMUST00000149179.9	ENSMUSG00000016356.19	Col20a1	chr2	protein_coding	collagen, type XX, alpha 1
chr2	180657402	180658048	+	180657402;180657650	180657483;180658048	ES	0.5	50	50	ENSMUST00000149179.9	ENSMUSG00000016356.19	Col20a1	chr2	protein_coding	collagen, type XX, alpha 1
chr2	180634801;180635161	180635036;180635993	+	180634801	180635993	cassetteExon	0.5	100	100	ENSMUST00000149179.9	ENSMUSG00000016356.19	Col20a1	chr2	protein_coding	collagen, type XX, alpha 1
chr2	180651223;180654955	180654860;180655029	+	180651223	180655029	cassetteExon	0.5	100	100	ENSMUST00000149179.9	ENSMUSG00000016356.19	Col20a1	chr2	protein_coding	collagen, type XX, alpha 1
chr2	180642294	180642686	+	180642290	180642686	A5SS	0.5	50	50	ENSMUST00000149179.9	ENSMUSG00000016356.19	Col20a1	chr2	protein_coding	collagen, type XX, alpha 1
chr2	180679363	180685180	-	180679363	180680785	5pMXE	0.5	50	50	ENSMUST00000108851.8	ENSMUSG00000027577.15	Chrna4	chr2	protein_coding	cholinergic receptor, nicotinic, alpha polypeptide 4
chr2	180660446	180666558	-	180660362	180666558	A3SS	0.5	50	50	ENSMUST00000108851.8	ENSMUSG00000027577.15	Chrna4	chr2	protein_coding	cholinergic receptor, nicotinic, alpha polypeptide 4
chr2	180671365	180675690	-	180671365	180675713	A5SS	0.5	50	50	ENSMUST00000108851.8	ENSMUSG00000027577.15	Chrna4	chr2	protein_coding	cholinergic receptor, nicotinic, alpha polypeptide 4
chr2	180730363	180738743	-	180730363;180734085	180734032;180738743	ES	0.33	50	50	ENSMUST00000149964.9	ENSMUSG00000016346.18	Kcnq2	chr2	protein_coding	potassium voltage-gated channel, subfamily Q, member 2
chr2	180742411	180746680	-	180742411;180745464	180745435;180746680	ES	0.5	50	50	ENSMUST00000149964.9	ENSMUSG00000016346.18	Kcnq2	chr2	protein_coding	potassium voltage-gated channel, subfamily Q, member 2
chr2	180724249;180727143	180727036;180728762	-	180724249	180728762	cassetteExon	0.5	100	100	ENSMUST00000149964.9	ENSMUSG00000016346.18	Kcnq2	chr2	protein_coding	potassium voltage-gated channel, subfamily Q, member 2
chr2	180717995	180728762	-	180724249	180728762	A3SS&ES	0.33	50	50	ENSMUST00000149964.9	ENSMUSG00000016346.18	Kcnq2	chr2	protein_coding	potassium voltage-gated channel, subfamily Q, member 2
chr2	180729473	180730140	-	180729476	180730140	A3SS	0.5	50	50	ENSMUST00000149964.9	ENSMUSG00000016346.18	Kcnq2	chr2	protein_coding	potassium voltage-gated channel, subfamily Q, member 2
chr2	180730327	180738743	-	180734085	180738743	A3SS&ES	0.33	50	50	ENSMUST00000149964.9	ENSMUSG00000016346.18	Kcnq2	chr2	protein_coding	potassium voltage-gated channel, subfamily Q, member 2
chr2	180750354	180750815	-	180746774	180750815	A3SS	0.5	50	50	ENSMUST00000149964.9	ENSMUSG00000016346.18	Kcnq2	chr2	protein_coding	potassium voltage-gated channel, subfamily Q, member 2
chr2	180724249	180728669	-	180724249	180728762	A5SS	0.33	50	50	ENSMUST00000149964.9	ENSMUSG00000016346.18	Kcnq2	chr2	protein_coding	potassium voltage-gated channel, subfamily Q, member 2
chr2	180730327	180738743	-	180730363	180738743	A3SS	0.33	50	50	ENSMUST00000016491.14	ENSMUSG00000016346.18	Kcnq2	chr2	protein_coding	potassium voltage-gated channel, subfamily Q, member 2
chr2	180724249	180728669	-	180724249	180727036	A5SS&ES	0.33	50	50	ENSMUST00000016491.14	ENSMUSG00000016346.18	Kcnq2	chr2	protein_coding	potassium voltage-gated channel, subfamily Q, member 2
chr2	180727143	180728762	-	180717995	180728762	A3SS	0.33	50	50	ENSMUST00000081528.13	ENSMUSG00000016346.18	Kcnq2	chr2	protein_coding	potassium voltage-gated channel, subfamily Q, member 2
chr2	180717995	180723248	-	180717995	180728762	A5SS	0.5	50	50	ENSMUST00000081528.13	ENSMUSG00000016346.18	Kcnq2	chr2	protein_coding	potassium voltage-gated channel, subfamily Q, member 2
chr2	180730327	180737135	-	180730327	180738743	A5SS	0.5	50	50	ENSMUST00000103047.10	ENSMUSG00000016346.18	Kcnq2	chr2	protein_coding	potassium voltage-gated channel, subfamily Q, member 2
chr2	180829247	180829458	+	180829247	180829343	A3SS	0.5	50	50	ENSMUST00000016488.13	ENSMUSG00000016344.15	Ppdpf	chr2	protein_coding	pancreatic progenitor cell differentiation and proliferation factor
chr2	180872713	180873024	-	180872713;180872932	180872801;180873024	ES	0.5	50	50	ENSMUST00000108831.8	ENSMUSG00000027580.18	Helz2	chr2	protein_coding	helicase with zinc finger 2, transcriptional coactivator
chr2	180882864	180883605	-	180882864	180883759	A5SS	0.5	50	50	ENSMUST00000108831.8	ENSMUSG00000027580.18	Helz2	chr2	protein_coding	helicase with zinc finger 2, transcriptional coactivator
chr2	180906896	180907608	-	180906901	180907608	A3SS	0.5	50	50	ENSMUST00000049032.13	ENSMUSG00000038705.14	Gmeb2	chr2	protein_coding	glucocorticoid modulatory element binding protein 2
chr2	180902191	180906763	-	180902191	180906774	A5SS	0.5	50	50	ENSMUST00000049032.13	ENSMUSG00000038705.14	Gmeb2	chr2	protein_coding	glucocorticoid modulatory element binding protein 2
chr2	180919914	180928790	-	180919914	180929677	A5SS	0.5	50	50	ENSMUST00000049032.13	ENSMUSG00000038705.14	Gmeb2	chr2	protein_coding	glucocorticoid modulatory element binding protein 2
chr2	180977839;180980147	180980028;180980849	+	180977839	180980849	cassetteExon	0.5	100	100	ENSMUST00000098971.11	ENSMUSG00000038685.19	Rtel1	chr2	protein_coding	regulator of telomere elongation helicase 1
chr2	180996235;180996918	180996802;180997103	+	180996235	180997103	cassetteExon	0.5	100	100	ENSMUST00000098971.11	ENSMUSG00000038685.19	Rtel1	chr2	protein_coding	regulator of telomere elongation helicase 1
chr2	180996235;180996918	180996802;180997444	+	180996235;180997345	180997103;180997444	MXE	0.5	100	100	ENSMUST00000098971.11	ENSMUSG00000038685.19	Rtel1	chr2	protein_coding	regulator of telomere elongation helicase 1
chr2	180994641	180995869	+	180994641	180995770	A3SS	0.5	50	50	ENSMUST00000098971.11	ENSMUSG00000038685.19	Rtel1	chr2	protein_coding	regulator of telomere elongation helicase 1
chr2	180996235	180997121	+	180996235	180997103	A3SS	0.33	50	50	ENSMUST00000098971.11	ENSMUSG00000038685.19	Rtel1	chr2	protein_coding	regulator of telomere elongation helicase 1
chr2	180961836	180962599	+	180961649	180962599	A5SS	0.5	50	50	ENSMUST00000098971.11	ENSMUSG00000038685.19	Rtel1	chr2	protein_coding	regulator of telomere elongation helicase 1
chr2	180996235	180997121	+	180996235;180996918	180996802;180997121	ES	0.5	50	50	ENSMUST00000139608.8	ENSMUSG00000038685.19	Rtel1	chr2	protein_coding	regulator of telomere elongation helicase 1
chr2	180996918	180997444	+	180996918;180997345	180997121;180997444	ES	0.5	50	50	ENSMUST00000139608.8	ENSMUSG00000038685.19	Rtel1	chr2	protein_coding	regulator of telomere elongation helicase 1
chr2	180996235	180997103	+	180996235	180996802	A3SS&ES	0.33	50	50	ENSMUST00000139608.8	ENSMUSG00000038685.19	Rtel1	chr2	protein_coding	regulator of telomere elongation helicase 1
chr2	180996918	180997103	+	180996918	180997121	A3SS	0.25	50	50	ENSMUST00000139608.8	ENSMUSG00000038685.19	Rtel1	chr2	protein_coding	regulator of telomere elongation helicase 1
chr2	180996918	180997210	+	180996918	180997121	A3SS	0.25	50	50	ENSMUST00000139608.8	ENSMUSG00000038685.19	Rtel1	chr2	protein_coding	regulator of telomere elongation helicase 1
chr2	180996918	180997444	+	180996918;180997345	180997103;180997444	ES	0.5	50	50	ENSMUST00000054622.15	ENSMUSG00000038685.19	Rtel1	chr2	protein_coding	regulator of telomere elongation helicase 1
chr2	180996235	180997121	+	180996235	180996802	A3SS&ES	0.33	50	50	ENSMUST00000054622.15	ENSMUSG00000038685.19	Rtel1	chr2	protein_coding	regulator of telomere elongation helicase 1
chr2	180996918	180997210	+	180996918	180997103	A3SS	0.25	50	50	ENSMUST00000054622.15	ENSMUSG00000038685.19	Rtel1	chr2	protein_coding	regulator of telomere elongation helicase 1
chr2	180996235;180997345	180997121;180997444	+	180996235;180996918	180996802;180997444	MXE	0.5	100	100	ENSMUST00000048608.16	ENSMUSG00000038685.19	Rtel1	chr2	protein_coding	regulator of telomere elongation helicase 1
chr2	180996918;180997345	180997210;180997444	+	180996918	180997444	cassetteExon	0.5	100	100	ENSMUST00000048608.16	ENSMUSG00000038685.19	Rtel1	chr2	protein_coding	regulator of telomere elongation helicase 1
chr2	180996918	180997444	+	180997345	180997444	5pMXE	0.5	50	50	ENSMUST00000139601.2	ENSMUSG00000038685.19	Rtel1	chr2	protein_coding	regulator of telomere elongation helicase 1
chr2	180998051	180998139	+	180998051	180998151	A3SS	0.5	50	50	ENSMUST00000124149.2	ENSMUSG00000038685.19	Rtel1	chr2	protein_coding	regulator of telomere elongation helicase 1
chr2	180997872	180997951	+	180997752	180997951	A5SS	0.5	50	50	ENSMUST00000133856.8	ENSMUSG00000038685.19	Rtel1	chr2	protein_coding	regulator of telomere elongation helicase 1
chr2	181001532	181003184	-	181001532;181002864	181002794;181003184	ES	0.5	50	50	ENSMUST00000170190.8	ENSMUSG00000038671.16	Arfrp1	chr2	protein_coding	ADP-ribosylation factor related protein 1
chr2	181006191;181006491	181006398;181007012	-	181006191	181007012	cassetteExon	0.5	100	100	ENSMUST00000170190.8	ENSMUSG00000038671.16	Arfrp1	chr2	protein_coding	ADP-ribosylation factor related protein 1
chr2	181006191;181006504	181006398;181007012	-	181006191	181007012	cassetteExon	0.5	100	100	ENSMUST00000170190.8	ENSMUSG00000038671.16	Arfrp1	chr2	protein_coding	ADP-ribosylation factor related protein 1
chr2	181003348	181005807	-	181003265	181005807	A3SS	0.5	50	50	ENSMUST00000170190.8	ENSMUSG00000038671.16	Arfrp1	chr2	protein_coding	ADP-ribosylation factor related protein 1
chr2	181005988	181006104	-	181005889	181006104	A3SS	0.5	50	50	ENSMUST00000170190.8	ENSMUSG00000038671.16	Arfrp1	chr2	protein_coding	ADP-ribosylation factor related protein 1
chr2	181006491	181007012	-	181006504	181007012	A3SS	0.33	50	50	ENSMUST00000185118.8	ENSMUSG00000038671.16	Arfrp1	chr2	protein_coding	ADP-ribosylation factor related protein 1
chr2	181006504	181007006	-	181006504	181007012	A5SS	0.5	50	50	ENSMUST00000185118.8	ENSMUSG00000038671.16	Arfrp1	chr2	protein_coding	ADP-ribosylation factor related protein 1
chr2	181006191	181007012	-	181006191	181006398	A5SS&ES	0.5	50	50	ENSMUST00000108808.8	ENSMUSG00000038671.16	Arfrp1	chr2	protein_coding	ADP-ribosylation factor related protein 1
chr2	181001532	181003184	-	181001532	181002794	A5SS	0.5	50	50	ENSMUST00000048269.12	ENSMUSG00000038671.16	Arfrp1	chr2	protein_coding	ADP-ribosylation factor related protein 1
chr2	181006191	181007012	-	181006504	181007012	A3SS	0.33	50	50	ENSMUST00000145358.2	ENSMUSG00000038671.16	Arfrp1	chr2	protein_coding	ADP-ribosylation factor related protein 1
chr2	181021972	181024280	+	181021972	181022168	3pMXE	0.33	50	50	ENSMUST00000029105.12	ENSMUSG00000027582.17	Zgpat	chr2	protein_coding	zinc finger, CCCH-type with G patch domain
chr2	181021972	181022196	+	181021972	181022168	A3SS	0.33	50	50	ENSMUST00000029105.12	ENSMUSG00000027582.17	Zgpat	chr2	protein_coding	zinc finger, CCCH-type with G patch domain
chr2	181023187	181024280	+	181023187;181024107	181023987;181024280	ES	0.33	50	50	ENSMUST00000116366.9	ENSMUSG00000027582.17	Zgpat	chr2	protein_coding	zinc finger, CCCH-type with G patch domain
chr2	181024496	181025051	+	181024496;181024953	181024592;181025051	ES	0.5	50	50	ENSMUST00000116366.9	ENSMUSG00000027582.17	Zgpat	chr2	protein_coding	zinc finger, CCCH-type with G patch domain
chr2	181021972	181024280	+	181024107	181024280	A5SS	0.33	50	50	ENSMUST00000131284.8	ENSMUSG00000027582.17	Zgpat	chr2	protein_coding	zinc finger, CCCH-type with G patch domain
chr2	181023187	181024280	+	181024107	181024280	A5SS	0.33	50	50	ENSMUST00000131284.8	ENSMUSG00000027582.17	Zgpat	chr2	protein_coding	zinc finger, CCCH-type with G patch domain
chr2	181021972	181024280	+	181021972	181022196	3pMXE	0.33	50	50	ENSMUST00000156258.2	ENSMUSG00000027582.17	Zgpat	chr2	protein_coding	zinc finger, CCCH-type with G patch domain
chr2	181024496	181025051	+	181024496	181024592	3pMXE	0.5	50	50	ENSMUST00000140943.8	ENSMUSG00000090077.10	Lime1	chr2	protein_coding	Lck interacting transmembrane adaptor 1
chr2	181023187	181024280	+	181021972	181024280	A5SS	0.33	50	50	ENSMUST00000140943.8	ENSMUSG00000090077.10	Lime1	chr2	protein_coding	Lck interacting transmembrane adaptor 1
chr2	181023187	181024280	+	181023187	181023987	A3SS	0.5	50	50	ENSMUST00000184328.8	ENSMUSG00000090077.10	Lime1	chr2	protein_coding	Lck interacting transmembrane adaptor 1
chr2	181026787	181027345	+	181026787	181027074	A3SS	0.5	50	50	ENSMUST00000127559.2	ENSMUSG00000085028.3	Slc2a4rg-ps	chr2	transcribed_unitary_pseudogene	Slc2a4 regulator, pseudogene
chr2	181066181;181088677	181088495;181101049	-	181066181	181101049	cassetteExon	0.5	100	100	ENSMUST00000029106.13	ENSMUSG00000027583.14	Zbtb46	chr2	protein_coding	zinc finger and BTB domain containing 46
chr2	181143846	181149959	+	181143846;181144728	181144669;181149959	ES	0.5	50	50	ENSMUST00000184588.8	ENSMUSG00000000827.19	Tpd52l2	chr2	protein_coding	tumor protein D52-like 2
chr2	181139125;181141783	181141638;181143698	+	181139125	181143698	cassetteExon	0.5	100	100	ENSMUST00000184588.8	ENSMUSG00000000827.19	Tpd52l2	chr2	protein_coding	tumor protein D52-like 2
chr2	181150060;181153408	181153367;181154832	+	181150060	181154832	cassetteExon	0.5	100	100	ENSMUST00000184588.8	ENSMUSG00000000827.19	Tpd52l2	chr2	protein_coding	tumor protein D52-like 2
chr2	181139125	181141096	+	181139125	181143698	A3SS	0.33	50	50	ENSMUST00000184588.8	ENSMUSG00000000827.19	Tpd52l2	chr2	protein_coding	tumor protein D52-like 2
chr2	181144728	181149966	+	181144728	181149959	A3SS	0.5	50	50	ENSMUST00000184588.8	ENSMUSG00000000827.19	Tpd52l2	chr2	protein_coding	tumor protein D52-like 2
chr2	181150060	181152297	+	181150060	181154832	A3SS	0.33	50	50	ENSMUST00000184588.8	ENSMUSG00000000827.19	Tpd52l2	chr2	protein_coding	tumor protein D52-like 2
chr2	181139125;181141246	181141096;181141638	+	181139125	181141638	cassetteExon	0.5	100	100	ENSMUST00000183956.8	ENSMUSG00000000827.19	Tpd52l2	chr2	protein_coding	tumor protein D52-like 2
chr2	181143846	181149959	+	181143846	181144669	A3SS&ES	0.5	50	50	ENSMUST00000183956.8	ENSMUSG00000000827.19	Tpd52l2	chr2	protein_coding	tumor protein D52-like 2
chr2	181150060;181152323	181152297;181153367	+	181150060	181153367	cassetteExon	0.5	100	100	ENSMUST00000149163.8	ENSMUSG00000000827.19	Tpd52l2	chr2	protein_coding	tumor protein D52-like 2
chr2	181139125	181143698	+	181141783	181143698	5pMXE	0.5	50	50	ENSMUST00000141825.2	ENSMUSG00000000827.19	Tpd52l2	chr2	protein_coding	tumor protein D52-like 2
chr2	181162490;181163080	181163028;181188164	+	181162490	181188164	cassetteExon	0.5	100	100	ENSMUST00000072334.12	ENSMUSG00000000826.17	Dnajc5	chr2	protein_coding	DnaJ heat shock protein family (Hsp40) member C5
chr2	181190634;181190793	181190719;181191066	+	181190634	181191066	cassetteExon	0.5	100	100	ENSMUST00000072334.12	ENSMUSG00000000826.17	Dnajc5	chr2	protein_coding	DnaJ heat shock protein family (Hsp40) member C5
chr2	181162778	181188164	+	181162490	181188164	A5SS	0.25	50	50	ENSMUST00000072334.12	ENSMUSG00000000826.17	Dnajc5	chr2	protein_coding	DnaJ heat shock protein family (Hsp40) member C5
chr2	181162851	181188164	+	181162490	181188164	A5SS	0.25	50	50	ENSMUST00000072334.12	ENSMUSG00000000826.17	Dnajc5	chr2	protein_coding	DnaJ heat shock protein family (Hsp40) member C5
chr2	181162778	181188164	+	181163080	181188164	A5SS&ES	0.25	50	50	ENSMUST00000108797.8	ENSMUSG00000000826.17	Dnajc5	chr2	protein_coding	DnaJ heat shock protein family (Hsp40) member C5
chr2	181162851	181188164	+	181163080	181188164	A5SS&ES	0.25	50	50	ENSMUST00000108797.8	ENSMUSG00000000826.17	Dnajc5	chr2	protein_coding	DnaJ heat shock protein family (Hsp40) member C5
chr2	181162851	181188164	+	181162778	181188164	A5SS	0.25	50	50	ENSMUST00000152578.8	ENSMUSG00000000826.17	Dnajc5	chr2	protein_coding	DnaJ heat shock protein family (Hsp40) member C5
chr2	181211988	181212293	-	181211988	181212102	5pMXE	0.33	50	50	ENSMUST00000134340.8	ENSMUSG00000089917.8	Uckl1	chr2	protein_coding	uridine-cytidine kinase 1-like 1
chr2	181211973	181212102	-	181211988	181212102	A3SS	0.5	50	50	ENSMUST00000134340.8	ENSMUSG00000089917.8	Uckl1	chr2	protein_coding	uridine-cytidine kinase 1-like 1
chr2	181211417	181211489	-	181211417	181211504	A5SS	0.5	50	50	ENSMUST00000134340.8	ENSMUSG00000089917.8	Uckl1	chr2	protein_coding	uridine-cytidine kinase 1-like 1
chr2	181211988	181212100	-	181211988	181212102	A5SS	0.33	50	50	ENSMUST00000134340.8	ENSMUSG00000089917.8	Uckl1	chr2	protein_coding	uridine-cytidine kinase 1-like 1
chr2	181211988	181212293	-	181211988;181212195	181212102;181212293	ES	0.5	50	50	ENSMUST00000057816.15	ENSMUSG00000089917.8	Uckl1	chr2	protein_coding	uridine-cytidine kinase 1-like 1
chr2	181212391	181214867	-	181212391;181214279	181214263;181214867	ES	0.5	50	50	ENSMUST00000057816.15	ENSMUSG00000089917.8	Uckl1	chr2	protein_coding	uridine-cytidine kinase 1-like 1
chr2	181216830	181226619	-	181216830	181223649	5pMXE	0.25	50	50	ENSMUST00000057816.15	ENSMUSG00000089917.8	Uckl1	chr2	protein_coding	uridine-cytidine kinase 1-like 1
chr2	181212391	181213296	-	181212391	181214263	A5SS	0.33	50	50	ENSMUST00000057816.15	ENSMUSG00000089917.8	Uckl1	chr2	protein_coding	uridine-cytidine kinase 1-like 1
chr2	181216830	181220340	-	181216830	181223649	A5SS	0.25	50	50	ENSMUST00000057816.15	ENSMUSG00000089917.8	Uckl1	chr2	protein_coding	uridine-cytidine kinase 1-like 1
chr2	181216830	181223196	-	181216830	181223649	A5SS	0.25	50	50	ENSMUST00000057816.15	ENSMUSG00000089917.8	Uckl1	chr2	protein_coding	uridine-cytidine kinase 1-like 1
chr2	181212391	181213296	-	181212391	181214867	A5SS	0.33	50	50	ENSMUST00000129469.8	ENSMUSG00000089917.8	Uckl1	chr2	protein_coding	uridine-cytidine kinase 1-like 1
chr2	181211988	181212293	-	181211988;181212195	181212100;181212293	ES	0.5	50	50	ENSMUST00000138408.8	ENSMUSG00000089917.8	Uckl1	chr2	protein_coding	uridine-cytidine kinase 1-like 1
chr2	181212391	181214867	-	181212391	181214263	5pMXE	0.33	50	50	ENSMUST00000138408.8	ENSMUSG00000089917.8	Uckl1	chr2	protein_coding	uridine-cytidine kinase 1-like 1
chr2	181211988	181212293	-	181212195	181212293	A3SS&ES	0.5	50	50	ENSMUST00000154613.8	ENSMUSG00000089917.8	Uckl1	chr2	protein_coding	uridine-cytidine kinase 1-like 1
chr2	181212391	181214867	-	181214279	181214867	3pMXE	0.5	50	50	ENSMUST00000142491.8	ENSMUSG00000089917.8	Uckl1	chr2	protein_coding	uridine-cytidine kinase 1-like 1
chr2	181216830	181220340	-	181216830	181226619	A5SS	0.25	50	50	ENSMUST00000144856.8	ENSMUSG00000089917.8	Uckl1	chr2	protein_coding	uridine-cytidine kinase 1-like 1
chr2	181216830	181223196	-	181216830	181226619	A5SS	0.25	50	50	ENSMUST00000144856.8	ENSMUSG00000089917.8	Uckl1	chr2	protein_coding	uridine-cytidine kinase 1-like 1
chr2	181216830	181223196	-	181216830	181220340	5pMXE	0.25	50	50	ENSMUST00000136875.2	ENSMUSG00000089917.8	Uckl1	chr2	protein_coding	uridine-cytidine kinase 1-like 1
chr2	181220421	181222058	+	181220421	181222236	A3SS	0.5	50	50	ENSMUST00000152365.2	ENSMUSG00000010492.11	Uckl1os	chr2	lncRNA	uridine-cytidine kinase 1-like 1, opposite strand
chr2	181221445	181222236	+	181220421	181222236	A5SS	0.5	50	50	ENSMUST00000152365.2	ENSMUSG00000010492.11	Uckl1os	chr2	lncRNA	uridine-cytidine kinase 1-like 1, opposite strand
chr2	181224187	181226806	+	181222421	181226806	A5SS	0.5	50	50	ENSMUST00000152365.2	ENSMUSG00000010492.11	Uckl1os	chr2	lncRNA	uridine-cytidine kinase 1-like 1, opposite strand
chr2	181220386	181222058	+	181220421	181222058	A5SS	0.25	50	50	ENSMUST00000123110.2	ENSMUSG00000010492.11	Uckl1os	chr2	lncRNA	uridine-cytidine kinase 1-like 1, opposite strand
chr2	181221445	181222058	+	181220421	181222058	A5SS	0.25	50	50	ENSMUST00000123110.2	ENSMUSG00000010492.11	Uckl1os	chr2	lncRNA	uridine-cytidine kinase 1-like 1, opposite strand
chr2	181221456	181222058	+	181220421	181222058	A5SS	0.25	50	50	ENSMUST00000123110.2	ENSMUSG00000010492.11	Uckl1os	chr2	lncRNA	uridine-cytidine kinase 1-like 1, opposite strand
chr2	181221445	181222058	+	181220386	181222058	A5SS	0.25	50	50	ENSMUST00000148847.2	ENSMUSG00000010492.11	Uckl1os	chr2	lncRNA	uridine-cytidine kinase 1-like 1, opposite strand
chr2	181221456	181222058	+	181220386	181222058	A5SS	0.25	50	50	ENSMUST00000148847.2	ENSMUSG00000010492.11	Uckl1os	chr2	lncRNA	uridine-cytidine kinase 1-like 1, opposite strand
chr2	181221445	181222236	+	181221445	181222058	A3SS	0.5	50	50	ENSMUST00000126672.2	ENSMUSG00000010492.11	Uckl1os	chr2	lncRNA	uridine-cytidine kinase 1-like 1, opposite strand
chr2	181221456	181222058	+	181221445	181222058	A5SS	0.25	50	50	ENSMUST00000126672.2	ENSMUSG00000010492.11	Uckl1os	chr2	lncRNA	uridine-cytidine kinase 1-like 1, opposite strand
chr2	181231974	181232653	-	181231974;181232405	181232263;181232653	ES	0.5	50	50	ENSMUST00000108789.9	ENSMUSG00000000823.17	Zfp512b	chr2	protein_coding	zinc finger protein 512B
chr2	181227309	181227466	-	181226866	181227466	A3SS	0.5	50	50	ENSMUST00000108789.9	ENSMUSG00000000823.17	Zfp512b	chr2	protein_coding	zinc finger protein 512B
chr2	181229896	181230007	-	181229872	181230007	A3SS	0.5	50	50	ENSMUST00000108789.9	ENSMUSG00000000823.17	Zfp512b	chr2	protein_coding	zinc finger protein 512B
chr2	181230313	181230418	-	181230313	181230448	A5SS	0.5	50	50	ENSMUST00000108789.9	ENSMUSG00000000823.17	Zfp512b	chr2	protein_coding	zinc finger protein 512B
chr2	181232778	181234207	-	181232778	181234214	A5SS	0.5	50	50	ENSMUST00000108789.9	ENSMUSG00000000823.17	Zfp512b	chr2	protein_coding	zinc finger protein 512B
chr2	181231974	181232653	-	181232405	181232653	3pMXE	0.5	50	50	ENSMUST00000153998.2	ENSMUSG00000000823.17	Zfp512b	chr2	protein_coding	zinc finger protein 512B
chr2	181243324	181249913	+	181233750	181249913	A5SS	0.5	50	50	ENSMUST00000132714.2	ENSMUSG00000002455.15	Prpf6	chr2	protein_coding	pre-mRNA splicing factor 6
chr2	181239386	181240725	-	181239402	181240725	A3SS	0.5	50	50	ENSMUST00000060173.9	ENSMUSG00000038605.12	Samd10	chr2	protein_coding	sterile alpha motif domain containing 10
chr2	181326326	181327570	+	181326326	181327585	A3SS	0.5	50	50	ENSMUST00000129686.8	ENSMUSG00000059540.16	Tcea2	chr2	protein_coding	transcription elongation factor A (SII), 2
chr2	181322268	181325006	+	181322528	181325006	A5SS	0.25	50	50	ENSMUST00000129686.8	ENSMUSG00000059540.16	Tcea2	chr2	protein_coding	transcription elongation factor A (SII), 2
chr2	181323030	181325006	+	181322528	181325006	A5SS	0.25	50	50	ENSMUST00000129686.8	ENSMUSG00000059540.16	Tcea2	chr2	protein_coding	transcription elongation factor A (SII), 2
chr2	181324739	181325006	+	181322528	181325006	A5SS	0.25	50	50	ENSMUST00000129686.8	ENSMUSG00000059540.16	Tcea2	chr2	protein_coding	transcription elongation factor A (SII), 2
chr2	181323030	181325006	+	181322268	181325006	A5SS	0.25	50	50	ENSMUST00000103042.10	ENSMUSG00000059540.16	Tcea2	chr2	protein_coding	transcription elongation factor A (SII), 2
chr2	181324739	181325006	+	181322268	181325006	A5SS	0.25	50	50	ENSMUST00000103042.10	ENSMUSG00000059540.16	Tcea2	chr2	protein_coding	transcription elongation factor A (SII), 2
chr2	181324739	181325006	+	181323030	181325006	A5SS	0.25	50	50	ENSMUST00000129745.8	ENSMUSG00000059540.16	Tcea2	chr2	protein_coding	transcription elongation factor A (SII), 2
chr2	181330511	181331495	-	181330511	181331170	5pMXE	0.5	50	50	ENSMUST00000144476.2	ENSMUSG00000002458.14	Rgs19	chr2	protein_coding	regulator of G-protein signaling 19
chr2	181331088	181331170	-	181330511	181331170	A3SS	0.5	50	50	ENSMUST00000144476.2	ENSMUSG00000002458.14	Rgs19	chr2	protein_coding	regulator of G-protein signaling 19
chr2	181333147	181335672	-	181333147;181333388	181333283;181335672	ES	0.33	50	50	ENSMUST00000108779.8	ENSMUSG00000002458.14	Rgs19	chr2	protein_coding	regulator of G-protein signaling 19
chr2	181330511;181331404	181331170;181331495	-	181330511	181331495	cassetteExon	0.5	100	100	ENSMUST00000108779.8	ENSMUSG00000002458.14	Rgs19	chr2	protein_coding	regulator of G-protein signaling 19
chr2	181333147	181335156	-	181333147	181333283	A5SS&ES	0.33	50	50	ENSMUST00000108779.8	ENSMUSG00000002458.14	Rgs19	chr2	protein_coding	regulator of G-protein signaling 19
chr2	181333388	181333514	-	181333388	181335672	A5SS	0.33	50	50	ENSMUST00000108779.8	ENSMUSG00000002458.14	Rgs19	chr2	protein_coding	regulator of G-protein signaling 19
chr2	181333388	181335156	-	181333388	181335672	A5SS	0.33	50	50	ENSMUST00000108779.8	ENSMUSG00000002458.14	Rgs19	chr2	protein_coding	regulator of G-protein signaling 19
chr2	181330511	181331495	-	181331404	181331495	A3SS&ES	0.5	50	50	ENSMUST00000002532.9	ENSMUSG00000002458.14	Rgs19	chr2	protein_coding	regulator of G-protein signaling 19
chr2	181333388	181335156	-	181333388	181333514	5pMXE	0.33	50	50	ENSMUST00000108778.8	ENSMUSG00000002458.14	Rgs19	chr2	protein_coding	regulator of G-protein signaling 19
chr2	181331569	181335672	-	181331569;181333147	181333026;181335672	ES	0.33	50	50	ENSMUST00000108772.8	ENSMUSG00000002458.14	Rgs19	chr2	protein_coding	regulator of G-protein signaling 19
chr2	181333147	181335156	-	181333147	181335672	A5SS	0.33	50	50	ENSMUST00000108772.8	ENSMUSG00000002458.14	Rgs19	chr2	protein_coding	regulator of G-protein signaling 19
chr2	181333147	181335156	-	181333147;181333388	181333283;181335156	ES	0.5	50	50	ENSMUST00000108776.8	ENSMUSG00000002458.14	Rgs19	chr2	protein_coding	regulator of G-protein signaling 19
chr2	181331569;181333388	181333026;181335672	-	181331569	181335672	cassetteExon	0.5	100	100	ENSMUST00000124776.2	ENSMUSG00000002458.14	Rgs19	chr2	protein_coding	regulator of G-protein signaling 19
chr2	181338737	181338798	-	181338722	181338798	A3SS	0.5	50	50	ENSMUST00000052416.4	ENSMUSG00000045794.4	Lkaaear1	chr2	protein_coding	LKAAEAR motif containing 1 (IKAAEAR murine motif)
chr2	181338893	181339035	-	181338920	181339035	A3SS	0.5	50	50	ENSMUST00000052416.4	ENSMUSG00000045794.4	Lkaaear1	chr2	protein_coding	LKAAEAR motif containing 1 (IKAAEAR murine motif)
chr2	181357739;181358328	181357911;181360170	+	181357739	181360170	cassetteExon	0.5	100	100	ENSMUST00000071585.10	ENSMUSG00000027584.18	Oprl1	chr2	protein_coding	opioid receptor-like 1
chr2	181357739;181358328	181358295;181360170	+	181357739	181360170	cassetteExon	0.5	100	100	ENSMUST00000071585.10	ENSMUSG00000027584.18	Oprl1	chr2	protein_coding	opioid receptor-like 1
chr2	181357739;181359886	181359748;181360170	+	181357739	181360170	cassetteExon	0.5	100	100	ENSMUST00000071585.10	ENSMUSG00000027584.18	Oprl1	chr2	protein_coding	opioid receptor-like 1
chr2	181357739;181359886	181359789;181360170	+	181357739	181360170	cassetteExon	0.5	100	100	ENSMUST00000071585.10	ENSMUSG00000027584.18	Oprl1	chr2	protein_coding	opioid receptor-like 1
chr2	181357282	181357483	+	181357022	181357483	A5SS	0.5	50	50	ENSMUST00000071585.10	ENSMUSG00000027584.18	Oprl1	chr2	protein_coding	opioid receptor-like 1
chr2	181357724	181360170	+	181357739	181360170	A5SS	0.25	50	50	ENSMUST00000071585.10	ENSMUSG00000027584.18	Oprl1	chr2	protein_coding	opioid receptor-like 1
chr2	181357739;181358328	181357911;181360170	+	181357739;181359886	181359748;181360170	MXE	0.5	100	100	ENSMUST00000183693.8	ENSMUSG00000027584.18	Oprl1	chr2	protein_coding	opioid receptor-like 1
chr2	181357739;181358328	181358295;181360170	+	181357739;181359886	181359748;181360170	MXE	0.5	100	100	ENSMUST00000183693.8	ENSMUSG00000027584.18	Oprl1	chr2	protein_coding	opioid receptor-like 1
chr2	181357739	181359789	+	181357739	181359748	A3SS	0.2	50	50	ENSMUST00000183693.8	ENSMUSG00000027584.18	Oprl1	chr2	protein_coding	opioid receptor-like 1
chr2	181357724	181360170	+	181359886	181360170	A5SS&ES	0.25	50	50	ENSMUST00000183693.8	ENSMUSG00000027584.18	Oprl1	chr2	protein_coding	opioid receptor-like 1
chr2	181357724;181358328	181358295;181360170	+	181357724	181360170	cassetteExon	0.5	100	100	ENSMUST00000148334.8	ENSMUSG00000027584.18	Oprl1	chr2	protein_coding	opioid receptor-like 1
chr2	181357739;181359886	181359789;181360170	+	181357739;181358328	181358295;181360170	MXE	0.5	100	100	ENSMUST00000108763.8	ENSMUSG00000027584.18	Oprl1	chr2	protein_coding	opioid receptor-like 1
chr2	181357739	181357911	+	181357739	181358295	A3SS	0.2	50	50	ENSMUST00000108763.8	ENSMUSG00000027584.18	Oprl1	chr2	protein_coding	opioid receptor-like 1
chr2	181357724	181358295	+	181357739	181358295	A5SS	0.5	50	50	ENSMUST00000108763.8	ENSMUSG00000027584.18	Oprl1	chr2	protein_coding	opioid receptor-like 1
chr2	181357724	181360170	+	181358328	181360170	A5SS&ES	0.25	50	50	ENSMUST00000108763.8	ENSMUSG00000027584.18	Oprl1	chr2	protein_coding	opioid receptor-like 1
chr2	181357739	181360170	+	181358328	181360170	A5SS&ES	0.25	50	50	ENSMUST00000184795.2	ENSMUSG00000027584.18	Oprl1	chr2	protein_coding	opioid receptor-like 1
chr2	181359886	181360170	+	181358328	181360170	A5SS	0.25	50	50	ENSMUST00000184795.2	ENSMUSG00000027584.18	Oprl1	chr2	protein_coding	opioid receptor-like 1
chr2	181357022	181357483	+	181357022	181360607	A3SS	0.5	50	50	ENSMUST00000126835.2	ENSMUSG00000027584.18	Oprl1	chr2	protein_coding	opioid receptor-like 1
chr2	181360525	181360607	+	181357022	181360607	A5SS	0.5	50	50	ENSMUST00000126835.2	ENSMUSG00000027584.18	Oprl1	chr2	protein_coding	opioid receptor-like 1
chr2	181357739	181359748	+	181357739	181357911	3pMXE	0.2	50	50	ENSMUST00000151241.2	ENSMUSG00000027584.18	Oprl1	chr2	protein_coding	opioid receptor-like 1
chr2	181357739	181359789	+	181357739	181357911	3pMXE	0.2	50	50	ENSMUST00000151241.2	ENSMUSG00000027584.18	Oprl1	chr2	protein_coding	opioid receptor-like 1
chr2	181357739	181360170	+	181357739	181357911	3pMXE	0.2	50	50	ENSMUST00000151241.2	ENSMUSG00000027584.18	Oprl1	chr2	protein_coding	opioid receptor-like 1
chr2	181357739;181358328	181357911;181360170	+	181357739;181359886	181359789;181360170	MXE	0.5	100	100	ENSMUST00000184127.2	ENSMUSG00000027584.18	Oprl1	chr2	protein_coding	opioid receptor-like 1
chr2	181437687	181442810	+	181437687;181439776	181438877;181442810	ES	0.33	50	50	ENSMUST00000081125.11	ENSMUSG00000010505.17	Myt1	chr2	protein_coding	myelin transcription factor 1
chr2	181443698	181446720	+	181443698;181444822	181444709;181446720	ES	0.5	50	50	ENSMUST00000081125.11	ENSMUSG00000010505.17	Myt1	chr2	protein_coding	myelin transcription factor 1
chr2	181444822	181448309	+	181444822;181446934	181446720;181448309	ES	0.5	50	50	ENSMUST00000081125.11	ENSMUSG00000010505.17	Myt1	chr2	protein_coding	myelin transcription factor 1
chr2	181453020	181456842	+	181453020;181453216	181453148;181456842	ES	0.33	50	50	ENSMUST00000081125.11	ENSMUSG00000010505.17	Myt1	chr2	protein_coding	myelin transcription factor 1
chr2	181436621	181437607	+	181436621	181437440	A3SS	0.5	50	50	ENSMUST00000081125.11	ENSMUSG00000010505.17	Myt1	chr2	protein_coding	myelin transcription factor 1
chr2	181409134	181424334	+	181405213	181424334	A5SS	0.33	50	50	ENSMUST00000081125.11	ENSMUSG00000010505.17	Myt1	chr2	protein_coding	myelin transcription factor 1
chr2	181409590	181424334	+	181405213	181424334	A5SS	0.33	50	50	ENSMUST00000081125.11	ENSMUSG00000010505.17	Myt1	chr2	protein_coding	myelin transcription factor 1
chr2	181453060	181453148	+	181453020	181453148	A5SS	0.5	50	50	ENSMUST00000081125.11	ENSMUSG00000010505.17	Myt1	chr2	protein_coding	myelin transcription factor 1
chr2	181409590	181424334	+	181409134	181424334	A5SS	0.33	50	50	ENSMUST00000156190.8	ENSMUSG00000010505.17	Myt1	chr2	protein_coding	myelin transcription factor 1
chr2	181444822	181448309	+	181444822	181446720	3pMXE	0.5	50	50	ENSMUST00000183403.8	ENSMUSG00000010505.17	Myt1	chr2	protein_coding	myelin transcription factor 1
chr2	181432372	181436559	+	181432372	181442810	A3SS	0.5	50	50	ENSMUST00000183403.8	ENSMUSG00000010505.17	Myt1	chr2	protein_coding	myelin transcription factor 1
chr2	181437687	181442810	+	181432372	181442810	A5SS	0.33	50	50	ENSMUST00000183403.8	ENSMUSG00000010505.17	Myt1	chr2	protein_coding	myelin transcription factor 1
chr2	181439776	181442810	+	181432372	181442810	A5SS	0.33	50	50	ENSMUST00000183403.8	ENSMUSG00000010505.17	Myt1	chr2	protein_coding	myelin transcription factor 1
chr2	181443698;181444822	181444709;181448309	+	181443698;181446934	181446720;181448309	MXE	0.5	100	100	ENSMUST00000108757.9	ENSMUSG00000010505.17	Myt1	chr2	protein_coding	myelin transcription factor 1
chr2	181452192	181456842	+	181452192;181453020	181452958;181456842	ES	0.33	50	50	ENSMUST00000129856.8	ENSMUSG00000010505.17	Myt1	chr2	protein_coding	myelin transcription factor 1
chr2	181437687	181438877	+	181437687	181442810	A3SS	0.5	50	50	ENSMUST00000129856.8	ENSMUSG00000010505.17	Myt1	chr2	protein_coding	myelin transcription factor 1
chr2	181439776	181442810	+	181437687	181442810	A5SS	0.33	50	50	ENSMUST00000129856.8	ENSMUSG00000010505.17	Myt1	chr2	protein_coding	myelin transcription factor 1
chr2	181452192;181453216	181452958;181456842	+	181452192	181456842	cassetteExon	0.5	100	100	ENSMUST00000129843.8	ENSMUSG00000010505.17	Myt1	chr2	protein_coding	myelin transcription factor 1
chr2	181453020	181456842	+	181453216	181456842	A5SS&ES	0.5	50	50	ENSMUST00000135744.3	ENSMUSG00000010505.17	Myt1	chr2	protein_coding	myelin transcription factor 1
chr2	181488432	181493375	+	181488432	181493379	A3SS	0.5	50	50	ENSMUST00000029116.14	ENSMUSG00000027589.15	Pcmtd2	chr2	protein_coding	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2
chr2	181492989	181493379	+	181488432	181493379	A5SS	0.5	50	50	ENSMUST00000029116.14	ENSMUSG00000027589.15	Pcmtd2	chr2	protein_coding	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2
chr2	181493506	181496731	+	181493502	181496731	A5SS	0.5	50	50	ENSMUST00000029116.14	ENSMUSG00000027589.15	Pcmtd2	chr2	protein_coding	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2
chr2	181492792	181493375	+	181488432	181493375	A5SS	0.33	50	50	ENSMUST00000108754.8	ENSMUSG00000027589.15	Pcmtd2	chr2	protein_coding	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2
chr2	181492811	181493375	+	181488432	181493375	A5SS	0.33	50	50	ENSMUST00000108754.8	ENSMUSG00000027589.15	Pcmtd2	chr2	protein_coding	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2
chr2	181492792	181493375	+	181492811	181493375	A5SS	0.33	50	50	ENSMUST00000145475.8	ENSMUSG00000027589.15	Pcmtd2	chr2	protein_coding	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2
chr2	181638220	181640553	+	181638220;181639429	181639205;181640553	ES	0.5	50	50	ENSMUST00000071760.8	ENSMUSG00000098505.4	Gm14496	chr2	protein_coding	predicted gene 14496
chr2	181640676	181641976	+	181640676	181641973	A3SS	0.5	50	50	ENSMUST00000071760.8	ENSMUSG00000098505.4	Gm14496	chr2	protein_coding	predicted gene 14496
chr2	181638220	181640553	+	181638220	181639205	A3SS	0.5	50	50	ENSMUST00000089788.8	ENSMUSG00000098505.4	Gm14496	chr2	protein_coding	predicted gene 14496
chr3	3699407	3703119	+	3573392	3703119	A5SS	0.5	50	50	ENSMUST00000108393.8	ENSMUSG00000017688.15	Hnf4g	chr3	protein_coding	hepatocyte nuclear factor 4, gamma
chr3	4865817;4877772	4877669;4878768	+	4865817	4878768	cassetteExon	0.5	100	100	ENSMUST00000183944.8	ENSMUSG00000098659.8	1110015O18Rik	chr3	lncRNA	RIKEN cDNA 1110015O18 gene
chr3	5244101;5267797	5267698;5285730	-	5244101	5285730	cassetteExon	0.5	100	100	ENSMUST00000128815.9	ENSMUSG00000086224.9	2700069I18Rik	chr3	lncRNA	RIKEN cDNA 2700069I18 gene
chr3	5309359	5310281	+	5309359	5310203	A3SS	0.5	50	50	ENSMUST00000175866.8	ENSMUSG00000025255.19	Zfhx4	chr3	protein_coding	zinc finger homeodomain 4
chr3	5455512	5461631	+	5455512	5461634	A3SS	0.5	50	50	ENSMUST00000175866.8	ENSMUSG00000025255.19	Zfhx4	chr3	protein_coding	zinc finger homeodomain 4
chr3	5286739	5306730	+	5283987	5306730	A5SS	0.5	50	50	ENSMUST00000175866.8	ENSMUSG00000025255.19	Zfhx4	chr3	protein_coding	zinc finger homeodomain 4
chr3	5283987	5306730	+	5283987	5394495	A3SS	0.5	50	50	ENSMUST00000175641.2	ENSMUSG00000025255.19	Zfhx4	chr3	protein_coding	zinc finger homeodomain 4
chr3	5310705	5394495	+	5283987	5394495	A5SS	0.5	50	50	ENSMUST00000175641.2	ENSMUSG00000025255.19	Zfhx4	chr3	protein_coding	zinc finger homeodomain 4
chr3	5626824	5628225	-	5626824;5627792	5627729;5628225	ES	0.33	50	50	ENSMUST00000165309.8	ENSMUSG00000040374.14	Pex2	chr3	protein_coding	peroxisomal biogenesis factor 2
chr3	5628789	5641098	-	5628789;5630258	5630193;5641098	ES	0.33	50	50	ENSMUST00000165309.8	ENSMUSG00000040374.14	Pex2	chr3	protein_coding	peroxisomal biogenesis factor 2
chr3	5628789;5635689	5635547;5641098	-	5628789;5630258	5630193;5641098	MXE	0.5	100	100	ENSMUST00000165309.8	ENSMUSG00000040374.14	Pex2	chr3	protein_coding	peroxisomal biogenesis factor 2
chr3	5626820	5628225	-	5627792	5628225	A3SS&ES	0.33	50	50	ENSMUST00000165309.8	ENSMUSG00000040374.14	Pex2	chr3	protein_coding	peroxisomal biogenesis factor 2
chr3	5626824	5628680	-	5626824;5628332	5628225;5628680	ES	0.5	50	50	ENSMUST00000164828.8	ENSMUSG00000040374.14	Pex2	chr3	protein_coding	peroxisomal biogenesis factor 2
chr3	5628789	5641098	-	5628789;5635689	5635547;5641098	ES	0.33	50	50	ENSMUST00000164828.8	ENSMUSG00000040374.14	Pex2	chr3	protein_coding	peroxisomal biogenesis factor 2
chr3	5626820	5628225	-	5626824	5628225	A3SS	0.33	50	50	ENSMUST00000164828.8	ENSMUSG00000040374.14	Pex2	chr3	protein_coding	peroxisomal biogenesis factor 2
chr3	5626824	5627729	-	5626824	5628680	A5SS	0.33	50	50	ENSMUST00000191916.6	ENSMUSG00000040374.14	Pex2	chr3	protein_coding	peroxisomal biogenesis factor 2
chr3	5626824	5628680	-	5628332	5628680	A3SS&ES	0.5	50	50	ENSMUST00000195855.6	ENSMUSG00000040374.14	Pex2	chr3	protein_coding	peroxisomal biogenesis factor 2
chr3	7431812	7502398	+	7431812;7471450	7471398;7502398	ES	0.33	50	50	ENSMUST00000192468.2	ENSMUSG00000027499.13	Pkia	chr3	protein_coding	protein kinase inhibitor, alpha
chr3	7494167	7502398	+	7471450	7502398	A5SS	0.33	50	50	ENSMUST00000192468.2	ENSMUSG00000027499.13	Pkia	chr3	protein_coding	protein kinase inhibitor, alpha
chr3	7494167	7502398	+	7431812	7502398	A5SS	0.33	50	50	ENSMUST00000028999.12	ENSMUSG00000027499.13	Pkia	chr3	protein_coding	protein kinase inhibitor, alpha
chr3	7593744	7616443	+	7593744;7604243	7604136;7616443	ES	0.5	50	50	ENSMUST00000051064.9	ENSMUSG00000043542.13	Zc2hc1a	chr3	protein_coding	zinc finger, C2HC-type containing 1A
chr3	7593744	7616443	+	7604243	7616443	5pMXE	0.5	50	50	ENSMUST00000192835.2	ENSMUSG00000043542.13	Zc2hc1a	chr3	protein_coding	zinc finger, C2HC-type containing 1A
chr3	7642314;7658795	7658680;7669091	-	7642314	7669091	cassetteExon	0.5	100	100	ENSMUST00000194279.6	ENSMUSG00000040329.15	Il7	chr3	protein_coding	interleukin 7
chr3	7669224;7677228	7676875;7678231	-	7669224	7678231	cassetteExon	0.5	100	100	ENSMUST00000194279.6	ENSMUSG00000040329.15	Il7	chr3	protein_coding	interleukin 7
chr3	7669224	7670885	-	7669224	7678231	A5SS	0.33	50	50	ENSMUST00000194279.6	ENSMUSG00000040329.15	Il7	chr3	protein_coding	interleukin 7
chr3	7669224	7676875	-	7669224	7670885	5pMXE	0.33	50	50	ENSMUST00000168269.8	ENSMUSG00000040329.15	Il7	chr3	protein_coding	interleukin 7
chr3	7677228	7678231	-	7677228	7677691	5pMXE	0.5	50	50	ENSMUST00000194184.6	ENSMUSG00000040329.15	Il7	chr3	protein_coding	interleukin 7
chr3	7990553	8008594	-	7990553;7998393	7998255;8008594	ES	0.5	50	50	ENSMUST00000188525.6	ENSMUSG00000100010.6	1700010I02Rik	chr3	lncRNA	RIKEN cDNA 1700010I02 gene
chr3	8008622;8010399	8010260;8019872	-	8008622	8019872	cassetteExon	0.5	100	100	ENSMUST00000188525.6	ENSMUSG00000100010.6	1700010I02Rik	chr3	lncRNA	RIKEN cDNA 1700010I02 gene
chr3	9000100;9001540	9001499;9009671	-	9000100	9009671	cassetteExon	0.5	100	100	ENSMUST00000120143.8	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9000100;9008637	9008611;9009671	-	9000100	9009671	cassetteExon	0.5	100	100	ENSMUST00000120143.8	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9018859;9023394	9023251;9069465	-	9018859	9069465	cassetteExon	0.5	100	100	ENSMUST00000120143.8	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9018859;9068494	9068340;9069465	-	9018859	9069465	cassetteExon	0.5	100	100	ENSMUST00000120143.8	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9018859;9068494	9068348;9069465	-	9018859	9069465	cassetteExon	0.5	100	100	ENSMUST00000120143.8	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9018859	9027143	-	9018859	9069465	A5SS	0.12	50	50	ENSMUST00000120143.8	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9018859	9028907	-	9018859	9069465	A5SS	0.12	50	50	ENSMUST00000120143.8	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9018859	9053418	-	9018859	9069465	A5SS	0.12	50	50	ENSMUST00000120143.8	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9018859	9058801	-	9018859	9069465	A5SS	0.12	50	50	ENSMUST00000120143.8	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9000100;9008637	9008611;9009671	-	9000100;9001540	9001499;9009671	MXE	0.5	100	100	ENSMUST00000091355.12	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9001540;9008637	9008611;9009671	-	9001540	9009671	cassetteExon	0.5	100	100	ENSMUST00000091355.12	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9018859	9053418	-	9018859	9028907	5pMXE	0.12	50	50	ENSMUST00000091354.12	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9018859	9058801	-	9018859	9028907	5pMXE	0.12	50	50	ENSMUST00000091354.12	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9018859	9068340	-	9018859	9028907	5pMXE	0.12	50	50	ENSMUST00000091354.12	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9018859	9068348	-	9018859	9028907	5pMXE	0.12	50	50	ENSMUST00000091354.12	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9018859	9023251	-	9018859	9028907	A5SS	0.12	50	50	ENSMUST00000091354.12	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9018859	9027143	-	9018859	9028907	A5SS	0.12	50	50	ENSMUST00000091354.12	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9000100	9008611	-	9000100;9001540	9001499;9008611	ES	0.5	50	50	ENSMUST00000094381.11	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9018859	9068340	-	9018859	9058801	5pMXE	0.12	50	50	ENSMUST00000121038.8	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9018859	9068348	-	9018859	9058801	5pMXE	0.12	50	50	ENSMUST00000121038.8	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9018859	9023251	-	9018859	9058801	A5SS	0.12	50	50	ENSMUST00000121038.8	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9018859	9027143	-	9018859	9058801	A5SS	0.12	50	50	ENSMUST00000121038.8	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9018859	9053418	-	9018859	9058801	A5SS	0.12	50	50	ENSMUST00000121038.8	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9018859	9053418	-	9018859	9027143	5pMXE	0.12	50	50	ENSMUST00000145905.8	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9018859	9068340	-	9018859	9027143	5pMXE	0.12	50	50	ENSMUST00000145905.8	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9018859	9068348	-	9018859	9027143	5pMXE	0.12	50	50	ENSMUST00000145905.8	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9018859	9023251	-	9018859	9027143	A5SS	0.12	50	50	ENSMUST00000145905.8	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9018859;9023394	9023251;9069465	-	9018859;9068494	9068348;9069465	MXE	0.5	100	100	ENSMUST00000134788.8	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9018859	9053418	-	9018859	9068348	A5SS	0.12	50	50	ENSMUST00000134788.8	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9018859	9068340	-	9018859	9068348	A5SS	0.12	50	50	ENSMUST00000134788.8	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9018859	9068340	-	9018859	9053418	5pMXE	0.12	50	50	ENSMUST00000124956.2	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9018859	9023251	-	9018859	9053418	A5SS	0.12	50	50	ENSMUST00000124956.2	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9018859;9068494	9068340;9069465	-	9018859;9023394	9023251;9069465	MXE	0.5	100	100	ENSMUST00000129736.8	ENSMUSG00000027506.16	Tpd52	chr3	protein_coding	tumor protein D52
chr3	9468299	9475991	+	9468299;9469989	9469878;9475991	ES	0.5	50	50	ENSMUST00000180874.8	ENSMUSG00000097365.8	C030034L19Rik	chr3	lncRNA	RIKEN cDNA C030034L19 gene
chr3	9469989	9499769	+	9469989;9476125	9475991;9499769	ES	0.5	50	50	ENSMUST00000180874.8	ENSMUSG00000097365.8	C030034L19Rik	chr3	lncRNA	RIKEN cDNA C030034L19 gene
chr3	9468299;9476125	9475991;9499769	+	9468299;9469989	9469878;9499769	MXE	0.5	100	100	ENSMUST00000181331.2	ENSMUSG00000097365.8	C030034L19Rik	chr3	lncRNA	RIKEN cDNA C030034L19 gene
chr3	9509402	9511020	-	9504942	9511020	A3SS	0.5	50	50	ENSMUST00000041124.13	ENSMUSG00000040209.13	Zfp704	chr3	protein_coding	zinc finger protein 704
chr3	9504942	9508884	-	9504942	9511020	A5SS	0.5	50	50	ENSMUST00000041124.13	ENSMUSG00000040209.13	Zfp704	chr3	protein_coding	zinc finger protein 704
chr3	9817546	9898271	-	9817546;9852380	9852322;9898271	ES	0.33	50	50	ENSMUST00000161949.8	ENSMUSG00000027508.16	Pag1	chr3	protein_coding	phosphoprotein associated with glycosphingolipid microdomains 1
chr3	9893233	9898271	-	9852380	9898271	A3SS	0.33	50	50	ENSMUST00000161949.8	ENSMUSG00000027508.16	Pag1	chr3	protein_coding	phosphoprotein associated with glycosphingolipid microdomains 1
chr3	9893233	9898271	-	9817546	9898271	A3SS	0.33	50	50	ENSMUST00000108384.9	ENSMUSG00000027508.16	Pag1	chr3	protein_coding	phosphoprotein associated with glycosphingolipid microdomains 1
chr3	10247614	10259736	-	10247614	10248807	5pMXE	0.5	50	50	ENSMUST00000029034.9	ENSMUSG00000052468.8	Pmp2	chr3	protein_coding	peripheral myelin protein 2
chr3	10258862	10259736	-	10247614	10259736	A3SS	0.33	50	50	ENSMUST00000194885.2	ENSMUSG00000103124.2	Gm37389	chr3	protein_coding	predicted gene, 37389
chr3	10259128	10259736	-	10247614	10259736	A3SS	0.33	50	50	ENSMUST00000194885.2	ENSMUSG00000103124.2	Gm37389	chr3	protein_coding	predicted gene, 37389
chr3	10258862;10259128	10259027;10259736	-	10258862	10259736	cassetteExon	0.5	100	100	ENSMUST00000193487.6	ENSMUSG00000027528.13	Fabp9	chr3	protein_coding	fatty acid binding protein 9, testis
chr3	10317417	10366185	-	10317417;10326682	10326470;10366185	ES	0.5	50	50	ENSMUST00000029043.13	ENSMUSG00000027530.16	Fabp12	chr3	protein_coding	fatty acid binding protein 12
chr3	10317417	10319038	-	10317417	10326470	A5SS	0.25	50	50	ENSMUST00000029043.13	ENSMUSG00000027530.16	Fabp12	chr3	protein_coding	fatty acid binding protein 12
chr3	10317417	10319196	-	10317417	10326470	A5SS	0.25	50	50	ENSMUST00000029043.13	ENSMUSG00000027530.16	Fabp12	chr3	protein_coding	fatty acid binding protein 12
chr3	10317417	10366185	-	10317417	10319038	5pMXE	0.25	50	50	ENSMUST00000172126.8	ENSMUSG00000027530.16	Fabp12	chr3	protein_coding	fatty acid binding protein 12
chr3	10317417	10319196	-	10317417	10319038	A5SS	0.25	50	50	ENSMUST00000172126.8	ENSMUSG00000027530.16	Fabp12	chr3	protein_coding	fatty acid binding protein 12
chr3	10317417	10366185	-	10317417	10319196	5pMXE	0.25	50	50	ENSMUST00000117917.8	ENSMUSG00000027530.16	Fabp12	chr3	protein_coding	fatty acid binding protein 12
chr3	10381314	10387964	-	10381314;10386780	10386672;10387964	ES	0.5	50	50	ENSMUST00000065938.15	ENSMUSG00000027531.17	Impa1	chr3	protein_coding	inositol (myo)-1(or 4)-monophosphatase 1
chr3	10394068	10396140	-	10394068	10396382	A5SS	0.5	50	50	ENSMUST00000065938.15	ENSMUSG00000027531.17	Impa1	chr3	protein_coding	inositol (myo)-1(or 4)-monophosphatase 1
chr3	10381314	10387964	-	10386780	10387964	3pMXE	0.5	50	50	ENSMUST00000192603.2	ENSMUSG00000103392.2	Gm38303	chr3	protein_coding	predicted gene, 38303
chr3	10406205	10409861	-	10406209	10409861	A3SS	0.5	50	50	ENSMUST00000037839.12	ENSMUSG00000039795.15	Zfand1	chr3	protein_coding	zinc finger, AN1-type domain 1
chr3	10412471	10413570	-	10412264	10413570	A3SS	0.5	50	50	ENSMUST00000037839.12	ENSMUSG00000039795.15	Zfand1	chr3	protein_coding	zinc finger, AN1-type domain 1
chr3	10413612	10416229	-	10413612	10416302	A5SS	0.5	50	50	ENSMUST00000037839.12	ENSMUSG00000039795.15	Zfand1	chr3	protein_coding	zinc finger, AN1-type domain 1
chr3	10416117	10416229	-	10413612	10416229	A3SS	0.5	50	50	ENSMUST00000184644.8	ENSMUSG00000039795.15	Zfand1	chr3	protein_coding	zinc finger, AN1-type domain 1
chr3	10432281	10450612	+	10432281	10484125	A3SS	0.5	50	50	ENSMUST00000191826.2	ENSMUSG00000027536.7	Chmp4c	chr3	protein_coding	charged multivesicular body protein 4C
chr3	10484283;10485376	10485257;10485800	-	10484283	10485800	cassetteExon	0.5	100	100	ENSMUST00000099223.11	ENSMUSG00000027534.17	Snx16	chr3	protein_coding	sorting nexin 16
chr3	10500592	10502871	-	10485936	10502871	A3SS	0.5	50	50	ENSMUST00000195822.2	ENSMUSG00000027534.17	Snx16	chr3	protein_coding	sorting nexin 16
chr3	10485936	10491223	-	10485936	10502871	A5SS	0.5	50	50	ENSMUST00000195822.2	ENSMUSG00000027534.17	Snx16	chr3	protein_coding	sorting nexin 16
chr3	13538525	13841885	+	13537852	13841885	A5SS	0.5	50	50	ENSMUST00000191806.3	ENSMUSG00000039717.17	Ralyl	chr3	protein_coding	RALY RNA binding protein-like
chr3	14146300	14180753	+	14146300;14172326	14172279;14180753	ES	0.5	50	50	ENSMUST00000193117.3	ENSMUSG00000039717.17	Ralyl	chr3	protein_coding	RALY RNA binding protein-like
chr3	14194731	14246098	+	14194731;14208506	14208334;14246098	ES	0.5	50	50	ENSMUST00000193117.3	ENSMUSG00000039717.17	Ralyl	chr3	protein_coding	RALY RNA binding protein-like
chr3	13842163	13842357	+	13842163	14104774	A3SS	0.5	50	50	ENSMUST00000193117.3	ENSMUSG00000039717.17	Ralyl	chr3	protein_coding	RALY RNA binding protein-like
chr3	14011592	14104774	+	13842163	14104774	A5SS	0.5	50	50	ENSMUST00000193117.3	ENSMUSG00000039717.17	Ralyl	chr3	protein_coding	RALY RNA binding protein-like
chr3	14546517	14564109	+	14546517;14562417	14562286;14564109	ES	0.5	50	50	ENSMUST00000037321.8	ENSMUSG00000039710.15	Slc7a12	chr3	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 12
chr3	14599082	14601534	+	14599082;14601264	14601059;14601534	ES	0.5	50	50	ENSMUST00000108370.9	ENSMUSG00000027550.15	Lrrcc1	chr3	protein_coding	leucine rich repeat and coiled-coil domain containing 1
chr3	14602437	14604971	+	14602437;14604864	14604689;14604971	ES	0.5	50	50	ENSMUST00000108370.9	ENSMUSG00000027550.15	Lrrcc1	chr3	protein_coding	leucine rich repeat and coiled-coil domain containing 1
chr3	14619565	14623311	+	14619565;14622434	14622249;14623311	ES	0.5	50	50	ENSMUST00000108370.9	ENSMUSG00000027550.15	Lrrcc1	chr3	protein_coding	leucine rich repeat and coiled-coil domain containing 1
chr3	14615515	14616232	+	14615515	14616448	A3SS	0.5	50	50	ENSMUST00000108370.9	ENSMUSG00000027550.15	Lrrcc1	chr3	protein_coding	leucine rich repeat and coiled-coil domain containing 1
chr3	14628154	14629462	+	14628154	14637464	A3SS	0.33	50	50	ENSMUST00000108370.9	ENSMUSG00000027550.15	Lrrcc1	chr3	protein_coding	leucine rich repeat and coiled-coil domain containing 1
chr3	14628154	14630793	+	14628154	14637464	A3SS	0.33	50	50	ENSMUST00000108370.9	ENSMUSG00000027550.15	Lrrcc1	chr3	protein_coding	leucine rich repeat and coiled-coil domain containing 1
chr3	14605126	14610556	+	14605174	14610556	A5SS	0.5	50	50	ENSMUST00000108370.9	ENSMUSG00000027550.15	Lrrcc1	chr3	protein_coding	leucine rich repeat and coiled-coil domain containing 1
chr3	14628154	14629462	+	14628154	14630793	A3SS	0.33	50	50	ENSMUST00000169079.8	ENSMUSG00000027550.15	Lrrcc1	chr3	protein_coding	leucine rich repeat and coiled-coil domain containing 1
chr3	14653361	14666060	+	14653361	14666063	A3SS	0.5	50	50	ENSMUST00000029069.13	ENSMUSG00000027552.15	E2f5	chr3	protein_coding	E2F transcription factor 5
chr3	14671468	14674601	-	14671468;14672353	14672237;14674601	ES	0.5	50	50	ENSMUST00000185384.7	ENSMUSG00000078784.9	Rbis	chr3	protein_coding	ribosomal biogenesis factor
chr3	14674717	14676077	-	14674717	14676270	A5SS	0.5	50	50	ENSMUST00000185384.7	ENSMUSG00000078784.9	Rbis	chr3	protein_coding	ribosomal biogenesis factor
chr3	14671468	14674601	-	14672353	14674601	A3SS	0.5	50	50	ENSMUST00000186870.7	ENSMUSG00000078784.9	Rbis	chr3	protein_coding	ribosomal biogenesis factor
chr3	14841396	14843408	-	14841396;14842986	14842789;14843408	ES	0.5	50	50	ENSMUST00000181860.8	ENSMUSG00000027556.16	Car1	chr3	protein_coding	carbonic anhydrase 1
chr3	15482052	15491393	-	15482253	15491393	A3SS	0.5	50	50	ENSMUST00000099201.9	ENSMUSG00000095788.7	Sirpb1a	chr3	protein_coding	signal-regulatory protein beta 1A
chr3	15444167	15475471	-	15444167	15475453	A5SS	0.5	50	50	ENSMUST00000099201.9	ENSMUSG00000095788.7	Sirpb1a	chr3	protein_coding	signal-regulatory protein beta 1A
chr3	15613806	15639938	-	15614007	15639938	A3SS	0.5	50	50	ENSMUST00000192382.6	ENSMUSG00000095028.7	Sirpb1b	chr3	protein_coding	signal-regulatory protein beta 1B
chr3	15568276	15607218	-	15568276	15607200	A5SS	0.5	50	50	ENSMUST00000192382.6	ENSMUSG00000095028.7	Sirpb1b	chr3	protein_coding	signal-regulatory protein beta 1B
chr3	15849514;15856767	15856653;15886294	-	15849514	15886294	cassetteExon	0.5	100	100	ENSMUST00000148194.8	ENSMUSG00000074677.12	Sirpb1c	chr3	protein_coding	signal-regulatory protein beta 1C
chr3	15849514	15886312	-	15849514	15886294	A5SS	0.33	50	50	ENSMUST00000148194.8	ENSMUSG00000074677.12	Sirpb1c	chr3	protein_coding	signal-regulatory protein beta 1C
chr3	15849514;15856767	15856653;15886312	-	15849514	15886312	cassetteExon	0.5	100	100	ENSMUST00000108354.8	ENSMUSG00000074677.12	Sirpb1c	chr3	protein_coding	signal-regulatory protein beta 1C
chr3	15892928	15902505	-	15893129	15902505	A3SS	0.33	50	50	ENSMUST00000108354.8	ENSMUSG00000074677.12	Sirpb1c	chr3	protein_coding	signal-regulatory protein beta 1C
chr3	15893123	15902505	-	15893129	15902505	A3SS	0.33	50	50	ENSMUST00000108354.8	ENSMUSG00000074677.12	Sirpb1c	chr3	protein_coding	signal-regulatory protein beta 1C
chr3	15849514	15886312	-	15849514	15856653	A5SS&ES	0.33	50	50	ENSMUST00000108352.9	ENSMUSG00000074677.12	Sirpb1c	chr3	protein_coding	signal-regulatory protein beta 1C
chr3	15856767	15886312	-	15856767	15886294	A5SS	0.5	50	50	ENSMUST00000108352.9	ENSMUSG00000074677.12	Sirpb1c	chr3	protein_coding	signal-regulatory protein beta 1C
chr3	15849514	15886294	-	15849514	15856653	A5SS&ES	0.33	50	50	ENSMUST00000050623.11	ENSMUSG00000074677.12	Sirpb1c	chr3	protein_coding	signal-regulatory protein beta 1C
chr3	15892928	15902505	-	15893123	15902505	A3SS	0.33	50	50	ENSMUST00000108349.2	ENSMUSG00000074677.12	Sirpb1c	chr3	protein_coding	signal-regulatory protein beta 1C
chr3	16238110;16241279	16241131;16243642	+	16238110	16243642	cassetteExon	0.5	100	100	ENSMUST00000108345.9	ENSMUSG00000047213.15	Ythdf3	chr3	protein_coding	YTH N6-methyladenosine RNA binding protein 3
chr3	16243727;16257383	16257351;16257990	+	16243727	16257990	cassetteExon	0.5	100	100	ENSMUST00000108345.9	ENSMUSG00000047213.15	Ythdf3	chr3	protein_coding	YTH N6-methyladenosine RNA binding protein 3
chr3	16241881	16243642	+	16238110	16243642	A5SS	0.33	50	50	ENSMUST00000108345.9	ENSMUSG00000047213.15	Ythdf3	chr3	protein_coding	YTH N6-methyladenosine RNA binding protein 3
chr3	16241279	16243642	+	16241279;16241881	16241803;16243642	ES	0.33	50	50	ENSMUST00000193598.5	ENSMUSG00000047213.15	Ythdf3	chr3	protein_coding	YTH N6-methyladenosine RNA binding protein 3
chr3	17849177	17863080	+	17849177	17853554	3pMXE	0.5	50	50	ENSMUST00000188983.7	ENSMUSG00000100252.7	Mir124-2hg	chr3	lncRNA	Mir124-2 host gene (non-protein coding)
chr3	17848249	17848757	+	17844344	17848757	A5SS	0.33	50	50	ENSMUST00000188983.7	ENSMUSG00000100252.7	Mir124-2hg	chr3	lncRNA	Mir124-2 host gene (non-protein coding)
chr3	17848638	17848757	+	17844344	17848757	A5SS	0.33	50	50	ENSMUST00000188983.7	ENSMUSG00000100252.7	Mir124-2hg	chr3	lncRNA	Mir124-2 host gene (non-protein coding)
chr3	17848925	17853554	+	17849177	17853554	A5SS	0.5	50	50	ENSMUST00000188983.7	ENSMUSG00000100252.7	Mir124-2hg	chr3	lncRNA	Mir124-2 host gene (non-protein coding)
chr3	17848249	17848757	+	17848638	17848757	A5SS	0.33	50	50	ENSMUST00000186746.2	ENSMUSG00000100252.7	Mir124-2hg	chr3	lncRNA	Mir124-2 host gene (non-protein coding)
chr3	19254331;19254866	19254805;19265632	+	19254331;19260714	19260616;19265632	MXE	0.5	100	100	ENSMUST00000130806.8	ENSMUSG00000027601.14	Mtfr1	chr3	protein_coding	mitochondrial fission regulator 1
chr3	19260714;19262691	19262655;19265632	+	19260714	19265632	cassetteExon	0.5	100	100	ENSMUST00000130806.8	ENSMUSG00000027601.14	Mtfr1	chr3	protein_coding	mitochondrial fission regulator 1
chr3	19241550	19254190	+	19241712	19254190	A5SS&ES	0.25	50	50	ENSMUST00000130806.8	ENSMUSG00000027601.14	Mtfr1	chr3	protein_coding	mitochondrial fission regulator 1
chr3	19242452	19254190	+	19241712	19254190	A5SS	0.25	50	50	ENSMUST00000130806.8	ENSMUSG00000027601.14	Mtfr1	chr3	protein_coding	mitochondrial fission regulator 1
chr3	19243056	19254190	+	19241712	19254190	A5SS	0.25	50	50	ENSMUST00000130806.8	ENSMUSG00000027601.14	Mtfr1	chr3	protein_coding	mitochondrial fission regulator 1
chr3	19242452	19254190	+	19241550	19254190	A5SS	0.25	50	50	ENSMUST00000119865.8	ENSMUSG00000027601.14	Mtfr1	chr3	protein_coding	mitochondrial fission regulator 1
chr3	19243056	19254190	+	19241550	19254190	A5SS	0.25	50	50	ENSMUST00000119865.8	ENSMUSG00000027601.14	Mtfr1	chr3	protein_coding	mitochondrial fission regulator 1
chr3	19243056	19254190	+	19242452	19254190	A5SS	0.25	50	50	ENSMUST00000130645.8	ENSMUSG00000027601.14	Mtfr1	chr3	protein_coding	mitochondrial fission regulator 1
chr3	19254331;19254866	19254805;19265632	+	19254331;19262691	19260616;19265632	MXE	0.5	100	100	ENSMUST00000029129.10	ENSMUSG00000027601.14	Mtfr1	chr3	protein_coding	mitochondrial fission regulator 1
chr3	19262691	19265632	+	19254866	19265632	A5SS	0.33	50	50	ENSMUST00000138777.8	ENSMUSG00000027601.14	Mtfr1	chr3	protein_coding	mitochondrial fission regulator 1
chr3	19295373;19295682	19295506;19297214	-	19295373	19297214	cassetteExon	0.5	100	100	ENSMUST00000099195.10	ENSMUSG00000069094.13	Pde7a	chr3	protein_coding	phosphodiesterase 7A
chr3	19287355	19287624	-	19287355	19287840	A5SS	0.5	50	50	ENSMUST00000099195.10	ENSMUSG00000069094.13	Pde7a	chr3	protein_coding	phosphodiesterase 7A
chr3	19314456	19318984	-	19314456	19365028	A5SS	0.33	50	50	ENSMUST00000099195.10	ENSMUSG00000069094.13	Pde7a	chr3	protein_coding	phosphodiesterase 7A
chr3	19314456	19364954	-	19314456	19365028	A5SS	0.33	50	50	ENSMUST00000099195.10	ENSMUSG00000069094.13	Pde7a	chr3	protein_coding	phosphodiesterase 7A
chr3	19314456	19364954	-	19314456	19318984	5pMXE	0.33	50	50	ENSMUST00000091314.11	ENSMUSG00000069094.13	Pde7a	chr3	protein_coding	phosphodiesterase 7A
chr3	19297365	19310942	-	19290703	19310942	A3SS	0.5	50	50	ENSMUST00000149081.8	ENSMUSG00000069094.13	Pde7a	chr3	protein_coding	phosphodiesterase 7A
chr3	19290703	19295310	-	19290703	19310942	A5SS	0.5	50	50	ENSMUST00000149081.8	ENSMUSG00000069094.13	Pde7a	chr3	protein_coding	phosphodiesterase 7A
chr3	19562870	19600897	+	19562863	19600897	A5SS	0.33	50	50	ENSMUST00000118968.8	ENSMUSG00000027606.13	Dnajc5b	chr3	protein_coding	DnaJ heat shock protein family (Hsp40) member C5 beta
chr3	19585535	19600897	+	19562863	19600897	A5SS	0.33	50	50	ENSMUST00000118968.8	ENSMUSG00000027606.13	Dnajc5b	chr3	protein_coding	DnaJ heat shock protein family (Hsp40) member C5 beta
chr3	19585535	19600897	+	19562870	19600897	A5SS	0.33	50	50	ENSMUST00000029132.11	ENSMUSG00000027606.13	Dnajc5b	chr3	protein_coding	DnaJ heat shock protein family (Hsp40) member C5 beta
chr3	19699610	19704139	+	19699610	19713292	A3SS	0.5	50	50	ENSMUST00000029139.9	ENSMUSG00000060913.7	Trim55	chr3	protein_coding	tripartite motif-containing 55
chr3	20011593	20020403	+	20011593;20018691	20018444;20020403	ES	0.5	50	50	ENSMUST00000091309.12	ENSMUSG00000003617.17	Cp	chr3	protein_coding	ceruloplasmin
chr3	20043382	20059631	+	20043382	20046673	3pMXE	0.5	50	50	ENSMUST00000091309.12	ENSMUSG00000003617.17	Cp	chr3	protein_coding	ceruloplasmin
chr3	20028093	20029026	+	20028093	20029023	A3SS	0.5	50	50	ENSMUST00000091309.12	ENSMUSG00000003617.17	Cp	chr3	protein_coding	ceruloplasmin
chr3	20035005	20036127	+	20034962	20036127	A5SS	0.5	50	50	ENSMUST00000091309.12	ENSMUSG00000003617.17	Cp	chr3	protein_coding	ceruloplasmin
chr3	20043404	20046673	+	20043382	20046673	A5SS	0.5	50	50	ENSMUST00000091309.12	ENSMUSG00000003617.17	Cp	chr3	protein_coding	ceruloplasmin
chr3	20059735	20062704	+	20059735	20060714	3pMXE	0.33	50	50	ENSMUST00000108329.8	ENSMUSG00000003617.17	Cp	chr3	protein_coding	ceruloplasmin
chr3	20059735	20060211	+	20059735	20060714	A3SS	0.33	50	50	ENSMUST00000108329.8	ENSMUSG00000003617.17	Cp	chr3	protein_coding	ceruloplasmin
chr3	20059735	20060211	+	20059735	20062704	A3SS	0.33	50	50	ENSMUST00000003714.13	ENSMUSG00000003617.17	Cp	chr3	protein_coding	ceruloplasmin
chr3	20073083	20076922	-	20073083;20074121	20073967;20076922	ES	0.5	50	50	ENSMUST00000012580.13	ENSMUSG00000027615.15	Hps3	chr3	protein_coding	HPS3, biogenesis of lysosomal organelles complex 2 subunit 1
chr3	20080084;20082677	20082552;20083124	-	20080084	20083124	cassetteExon	0.5	100	100	ENSMUST00000012580.13	ENSMUSG00000027615.15	Hps3	chr3	protein_coding	HPS3, biogenesis of lysosomal organelles complex 2 subunit 1
chr3	20056581	20057389	-	20056577	20057389	A3SS	0.5	50	50	ENSMUST00000012580.13	ENSMUSG00000027615.15	Hps3	chr3	protein_coding	HPS3, biogenesis of lysosomal organelles complex 2 subunit 1
chr3	20057564	20062979	-	20057595	20062979	A3SS	0.5	50	50	ENSMUST00000012580.13	ENSMUSG00000027615.15	Hps3	chr3	protein_coding	HPS3, biogenesis of lysosomal organelles complex 2 subunit 1
chr3	20084573	20089213	-	20084969	20089213	A3SS	0.33	50	50	ENSMUST00000012580.13	ENSMUSG00000027615.15	Hps3	chr3	protein_coding	HPS3, biogenesis of lysosomal organelles complex 2 subunit 1
chr3	20089097	20089213	-	20084969	20089213	A3SS	0.33	50	50	ENSMUST00000012580.13	ENSMUSG00000027615.15	Hps3	chr3	protein_coding	HPS3, biogenesis of lysosomal organelles complex 2 subunit 1
chr3	20084573;20084969	20084723;20089213	-	20084573	20089213	cassetteExon	0.5	100	100	ENSMUST00000108321.2	ENSMUSG00000027615.15	Hps3	chr3	protein_coding	HPS3, biogenesis of lysosomal organelles complex 2 subunit 1
chr3	20089097	20089213	-	20084573	20089213	A3SS	0.33	50	50	ENSMUST00000108321.2	ENSMUSG00000027615.15	Hps3	chr3	protein_coding	HPS3, biogenesis of lysosomal organelles complex 2 subunit 1
chr3	20146980	20152244	+	20146980	20159805	A3SS	0.5	50	50	ENSMUST00000143005.8	ENSMUSG00000002428.13	Hltf	chr3	protein_coding	helicase-like transcription factor
chr3	20112688	20113063	+	20112171	20113063	A5SS	0.5	50	50	ENSMUST00000143005.8	ENSMUSG00000002428.13	Hltf	chr3	protein_coding	helicase-like transcription factor
chr3	20154119	20159805	+	20146980	20159805	A5SS	0.5	50	50	ENSMUST00000143005.8	ENSMUSG00000002428.13	Hltf	chr3	protein_coding	helicase-like transcription factor
chr3	20177028;20177336	20177286;20179422	-	20177028	20179422	cassetteExon	0.5	100	100	ENSMUST00000118015.9	ENSMUSG00000019528.19	Gyg	chr3	protein_coding	glycogenin
chr3	20177028	20179422	-	20177028	20177286	5pMXE	0.5	50	50	ENSMUST00000135475.2	ENSMUSG00000019528.19	Gyg	chr3	protein_coding	glycogenin
chr3	20293842	20294844	-	20293842	20296079	A5SS	0.5	50	50	ENSMUST00000001921.3	ENSMUSG00000001865.3	Cpa3	chr3	protein_coding	carboxypeptidase A3, mast cell
chr3	20318635	20319513	-	20317952	20319513	A3SS	0.5	50	50	ENSMUST00000011607.6	ENSMUSG00000011463.6	Cpb1	chr3	protein_coding	carboxypeptidase B1 (tissue)
chr3	21808123	21816489	-	21808123	21829943	A5SS	0.5	50	50	ENSMUST00000191725.2	ENSMUSG00000103441.2	7530428D23Rik	chr3	transcribed_processed_pseudogene	RIKEN cDNA 7530428D23 gene
chr3	22131118	22203106	+	22131118;22143686	22143577;22203106	ES	0.16	50	50	ENSMUST00000193734.6	ENSMUSG00000027630.14	Tbl1xr1	chr3	protein_coding	transducin (beta)-like 1X-linked receptor 1
chr3	22203172	22242530	+	22203172;22233469	22233367;22242530	ES	0.5	50	50	ENSMUST00000193734.6	ENSMUSG00000027630.14	Tbl1xr1	chr3	protein_coding	transducin (beta)-like 1X-linked receptor 1
chr3	22233469	22243932	+	22233469;22242675	22242530;22243932	ES	0.5	50	50	ENSMUST00000193734.6	ENSMUSG00000027630.14	Tbl1xr1	chr3	protein_coding	transducin (beta)-like 1X-linked receptor 1
chr3	22131118;22157111	22157031;22203106	+	22131118;22143686	22143577;22203106	MXE	0.5	100	100	ENSMUST00000193734.6	ENSMUSG00000027630.14	Tbl1xr1	chr3	protein_coding	transducin (beta)-like 1X-linked receptor 1
chr3	22257388	22258117	+	22257388	22257991	A3SS	0.5	50	50	ENSMUST00000193734.6	ENSMUSG00000027630.14	Tbl1xr1	chr3	protein_coding	transducin (beta)-like 1X-linked receptor 1
chr3	22258156	22263680	+	22258156	22263676	A3SS	0.5	50	50	ENSMUST00000193734.6	ENSMUSG00000027630.14	Tbl1xr1	chr3	protein_coding	transducin (beta)-like 1X-linked receptor 1
chr3	22131591	22203106	+	22143686	22203106	A5SS&ES	0.16	50	50	ENSMUST00000193734.6	ENSMUSG00000027630.14	Tbl1xr1	chr3	protein_coding	transducin (beta)-like 1X-linked receptor 1
chr3	22168777	22203106	+	22143686	22203106	A5SS	0.16	50	50	ENSMUST00000193734.6	ENSMUSG00000027630.14	Tbl1xr1	chr3	protein_coding	transducin (beta)-like 1X-linked receptor 1
chr3	22194702	22203106	+	22143686	22203106	A5SS	0.16	50	50	ENSMUST00000193734.6	ENSMUSG00000027630.14	Tbl1xr1	chr3	protein_coding	transducin (beta)-like 1X-linked receptor 1
chr3	22131118	22233367	+	22131118;22203172	22203106;22233367	ES	0.5	50	50	ENSMUST00000202747.4	ENSMUSG00000027630.14	Tbl1xr1	chr3	protein_coding	transducin (beta)-like 1X-linked receptor 1
chr3	22131118;22157111	22157031;22203106	+	22131118	22203106	cassetteExon	0.5	100	100	ENSMUST00000202747.4	ENSMUSG00000027630.14	Tbl1xr1	chr3	protein_coding	transducin (beta)-like 1X-linked receptor 1
chr3	22131591	22203106	+	22131118	22203106	A5SS	0.16	50	50	ENSMUST00000202747.4	ENSMUSG00000027630.14	Tbl1xr1	chr3	protein_coding	transducin (beta)-like 1X-linked receptor 1
chr3	22168777	22203106	+	22131118	22203106	A5SS	0.16	50	50	ENSMUST00000202747.4	ENSMUSG00000027630.14	Tbl1xr1	chr3	protein_coding	transducin (beta)-like 1X-linked receptor 1
chr3	22194702	22203106	+	22131118	22203106	A5SS	0.16	50	50	ENSMUST00000202747.4	ENSMUSG00000027630.14	Tbl1xr1	chr3	protein_coding	transducin (beta)-like 1X-linked receptor 1
chr3	22131118;22233469	22233367;22242530	+	22131118;22203172	22203106;22242530	MXE	0.5	100	100	ENSMUST00000202647.4	ENSMUSG00000027630.14	Tbl1xr1	chr3	protein_coding	transducin (beta)-like 1X-linked receptor 1
chr3	22131118	22143577	+	22131118	22233367	A3SS	0.25	50	50	ENSMUST00000200793.4	ENSMUSG00000027630.14	Tbl1xr1	chr3	protein_coding	transducin (beta)-like 1X-linked receptor 1
chr3	22131118	22157031	+	22131118	22233367	A3SS	0.25	50	50	ENSMUST00000200793.4	ENSMUSG00000027630.14	Tbl1xr1	chr3	protein_coding	transducin (beta)-like 1X-linked receptor 1
chr3	22203172;22242675	22242530;22243932	+	22203172;22233469	22233367;22243932	MXE	0.5	100	100	ENSMUST00000202149.4	ENSMUSG00000027630.14	Tbl1xr1	chr3	protein_coding	transducin (beta)-like 1X-linked receptor 1
chr3	22233469	22243932	+	22233469	22242530	3pMXE	0.5	50	50	ENSMUST00000200943.4	ENSMUSG00000027630.14	Tbl1xr1	chr3	protein_coding	transducin (beta)-like 1X-linked receptor 1
chr3	22131591	22203106	+	22157111	22203106	A5SS&ES	0.16	50	50	ENSMUST00000200943.4	ENSMUSG00000027630.14	Tbl1xr1	chr3	protein_coding	transducin (beta)-like 1X-linked receptor 1
chr3	22168777	22203106	+	22157111	22203106	A5SS	0.16	50	50	ENSMUST00000200943.4	ENSMUSG00000027630.14	Tbl1xr1	chr3	protein_coding	transducin (beta)-like 1X-linked receptor 1
chr3	22194702	22203106	+	22157111	22203106	A5SS	0.16	50	50	ENSMUST00000200943.4	ENSMUSG00000027630.14	Tbl1xr1	chr3	protein_coding	transducin (beta)-like 1X-linked receptor 1
chr3	22168777	22203106	+	22131591	22203106	A5SS	0.16	50	50	ENSMUST00000063988.14	ENSMUSG00000027630.14	Tbl1xr1	chr3	protein_coding	transducin (beta)-like 1X-linked receptor 1
chr3	22194702	22203106	+	22131591	22203106	A5SS	0.16	50	50	ENSMUST00000063988.14	ENSMUSG00000027630.14	Tbl1xr1	chr3	protein_coding	transducin (beta)-like 1X-linked receptor 1
chr3	22194702	22203106	+	22168777	22203106	A5SS	0.16	50	50	ENSMUST00000192328.5	ENSMUSG00000027630.14	Tbl1xr1	chr3	protein_coding	transducin (beta)-like 1X-linked receptor 1
chr3	22131118	22233367	+	22203172	22233367	5pMXE	0.5	50	50	ENSMUST00000201509.2	ENSMUSG00000027630.14	Tbl1xr1	chr3	protein_coding	transducin (beta)-like 1X-linked receptor 1
chr3	24606214	24948151	-	24606214	24837616	5pMXE	0.5	50	50	ENSMUST00000203414.2	ENSMUSG00000102758.4	Naaladl2	chr3	protein_coding	N-acetylated alpha-linked acidic dipeptidase-like 2
chr3	23923894	23993283	-	23923894	24057064	A5SS	0.33	50	50	ENSMUST00000203414.2	ENSMUSG00000102758.4	Naaladl2	chr3	protein_coding	N-acetylated alpha-linked acidic dipeptidase-like 2
chr3	23923894	24026257	-	23923894	24057064	A5SS	0.33	50	50	ENSMUST00000203414.2	ENSMUSG00000102758.4	Naaladl2	chr3	protein_coding	N-acetylated alpha-linked acidic dipeptidase-like 2
chr3	23923894	24026257	-	23923894	23993283	5pMXE	0.33	50	50	ENSMUST00000192246.4	ENSMUSG00000102758.4	Naaladl2	chr3	protein_coding	N-acetylated alpha-linked acidic dipeptidase-like 2
chr3	25966958	26187391	-	25966958;25974401	25974342;26187391	ES	0.5	50	50	ENSMUST00000193603.6	ENSMUSG00000063887.14	Nlgn1	chr3	protein_coding	neuroligin 1
chr3	25490806	25494056	-	25490806	25494029	A5SS	0.5	50	50	ENSMUST00000193603.6	ENSMUSG00000063887.14	Nlgn1	chr3	protein_coding	neuroligin 1
chr3	26188201	26207414	-	26188201	26238884	A5SS	0.5	50	50	ENSMUST00000193603.6	ENSMUSG00000063887.14	Nlgn1	chr3	protein_coding	neuroligin 1
chr3	27201168	27203142	-	27201168;27203036	27202944;27203142	ES	0.33	50	50	ENSMUST00000108300.8	ENSMUSG00000027699.20	Ect2	chr3	protein_coding	ect2 oncogene
chr3	27169699;27170281	27170215;27171927	-	27169699	27171927	cassetteExon	0.5	100	100	ENSMUST00000108300.8	ENSMUSG00000027699.20	Ect2	chr3	protein_coding	ect2 oncogene
chr3	27201031	27203142	-	27203036	27203142	A3SS&ES	0.33	50	50	ENSMUST00000108300.8	ENSMUSG00000027699.20	Ect2	chr3	protein_coding	ect2 oncogene
chr3	27203218	27204178	-	27203221	27204178	A3SS	0.5	50	50	ENSMUST00000108300.8	ENSMUSG00000027699.20	Ect2	chr3	protein_coding	ect2 oncogene
chr3	27204329	27207772	-	27204329	27207866	A5SS	0.33	50	50	ENSMUST00000108300.8	ENSMUSG00000027699.20	Ect2	chr3	protein_coding	ect2 oncogene
chr3	27204329	27207852	-	27204329	27207866	A5SS	0.33	50	50	ENSMUST00000108300.8	ENSMUSG00000027699.20	Ect2	chr3	protein_coding	ect2 oncogene
chr3	27201031	27203142	-	27201168	27203142	A3SS	0.33	50	50	ENSMUST00000108298.9	ENSMUSG00000027699.20	Ect2	chr3	protein_coding	ect2 oncogene
chr3	27204329	27207772	-	27204329	27207852	A5SS	0.33	50	50	ENSMUST00000108298.9	ENSMUSG00000027699.20	Ect2	chr3	protein_coding	ect2 oncogene
chr3	27237364;27261599	27261529;27276817	+	27237364	27276817	cassetteExon	0.5	100	100	ENSMUST00000046515.15	ENSMUSG00000027698.15	Nceh1	chr3	protein_coding	neutral cholesterol ester hydrolase 1
chr3	27242814	27276817	+	27237364	27276817	A5SS	0.33	50	50	ENSMUST00000046515.15	ENSMUSG00000027698.15	Nceh1	chr3	protein_coding	neutral cholesterol ester hydrolase 1
chr3	27242814	27276817	+	27261599	27276817	A5SS&ES	0.33	50	50	ENSMUST00000138947.8	ENSMUSG00000027698.15	Nceh1	chr3	protein_coding	neutral cholesterol ester hydrolase 1
chr3	27280291	27293681	+	27280291	27333343	A3SS	0.5	50	50	ENSMUST00000091284.5	ENSMUSG00000027698.15	Nceh1	chr3	protein_coding	neutral cholesterol ester hydrolase 1
chr3	27697238	27764495	-	27697238	27736887	A5SS&ES	0.5	50	50	ENSMUST00000195008.6	ENSMUSG00000039286.13	Fndc3b	chr3	protein_coding	fibronectin type III domain containing 3B
chr3	27697238	27765269	-	27697238	27764495	5pMXE	0.33	50	50	ENSMUST00000046157.10	ENSMUSG00000039286.13	Fndc3b	chr3	protein_coding	fibronectin type III domain containing 3B
chr3	27697238	27736887	-	27697238	27765269	A5SS	0.33	50	50	ENSMUST00000191684.2	ENSMUSG00000039286.13	Fndc3b	chr3	protein_coding	fibronectin type III domain containing 3B
chr3	27610345	27674754	-	27562688	27674754	A3SS	0.5	50	50	ENSMUST00000193779.2	ENSMUSG00000039286.13	Fndc3b	chr3	protein_coding	fibronectin type III domain containing 3B
chr3	27562688	27592098	-	27562688	27674754	A5SS	0.5	50	50	ENSMUST00000193779.2	ENSMUSG00000039286.13	Fndc3b	chr3	protein_coding	fibronectin type III domain containing 3B
chr3	28130740	28139935	+	28130740;28132566	28132353;28139935	ES	0.33	50	50	ENSMUST00000120834.8	ENSMUSG00000027695.17	Pld1	chr3	protein_coding	phospholipase D1
chr3	28132566;28133451	28133338;28139935	+	28132566	28139935	cassetteExon	0.5	100	100	ENSMUST00000120834.8	ENSMUSG00000027695.17	Pld1	chr3	protein_coding	phospholipase D1
chr3	28174977;28177906	28177838;28178722	+	28174977	28178722	cassetteExon	0.5	100	100	ENSMUST00000120834.8	ENSMUSG00000027695.17	Pld1	chr3	protein_coding	phospholipase D1
chr3	28006811	28009863	+	28006811	28078312	A3SS	0.5	50	50	ENSMUST00000120834.8	ENSMUSG00000027695.17	Pld1	chr3	protein_coding	phospholipase D1
chr3	28099245	28100613	+	28099245	28102162	A3SS	0.5	50	50	ENSMUST00000120834.8	ENSMUSG00000027695.17	Pld1	chr3	protein_coding	phospholipase D1
chr3	28184579	28184889	+	28184579	28185663	A3SS	0.5	50	50	ENSMUST00000120834.8	ENSMUSG00000027695.17	Pld1	chr3	protein_coding	phospholipase D1
chr3	28004243	28006662	+	27992899	28006662	A5SS	0.5	50	50	ENSMUST00000120834.8	ENSMUSG00000027695.17	Pld1	chr3	protein_coding	phospholipase D1
chr3	28038485	28078312	+	28006811	28078312	A5SS	0.5	50	50	ENSMUST00000120834.8	ENSMUSG00000027695.17	Pld1	chr3	protein_coding	phospholipase D1
chr3	28133451	28139935	+	28130740	28139935	A5SS	0.33	50	50	ENSMUST00000131842.2	ENSMUSG00000027695.17	Pld1	chr3	protein_coding	phospholipase D1
chr3	28596247	28609077	+	28596247;28603793	28603690;28609077	ES	0.5	50	50	ENSMUST00000160934.8	ENSMUSG00000027692.17	Tnik	chr3	protein_coding	TRAF2 and NCK interacting kinase
chr3	28650409	28661287	+	28650409;28658489	28658325;28661287	ES	0.5	50	50	ENSMUST00000160934.8	ENSMUSG00000027692.17	Tnik	chr3	protein_coding	TRAF2 and NCK interacting kinase
chr3	28648281;28649142	28649056;28650221	+	28648281	28650221	cassetteExon	0.5	100	100	ENSMUST00000160934.8	ENSMUSG00000027692.17	Tnik	chr3	protein_coding	TRAF2 and NCK interacting kinase
chr3	28677257;28679371	28679348;28684580	+	28677257	28684580	cassetteExon	0.5	100	100	ENSMUST00000160934.8	ENSMUSG00000027692.17	Tnik	chr3	protein_coding	TRAF2 and NCK interacting kinase
chr3	28463698	28548116	+	28413205	28548116	A5SS	0.5	50	50	ENSMUST00000160934.8	ENSMUSG00000027692.17	Tnik	chr3	protein_coding	TRAF2 and NCK interacting kinase
chr3	28762826	28771565	+	28762826;28767966	28767842;28771565	ES	0.5	50	50	ENSMUST00000029240.14	ENSMUSG00000027690.14	Slc2a2	chr3	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 2
chr3	28793111	28796265	-	28757101	28796265	A3SS	0.5	50	50	ENSMUST00000167704.2	ENSMUSG00000091329.3	1700112D23Rik	chr3	lncRNA	RIKEN cDNA 1700112D23 gene
chr3	28859692	28860652	+	28859692	28860649	A3SS	0.5	50	50	ENSMUST00000043867.11	ENSMUSG00000039221.11	Rpl22l1	chr3	protein_coding	ribosomal protein L22 like 1
chr3	28860741	28860819	+	28860741	28860886	A3SS	0.5	50	50	ENSMUST00000043867.11	ENSMUSG00000039221.11	Rpl22l1	chr3	protein_coding	ribosomal protein L22 like 1
chr3	28859730	28860652	+	28859692	28860652	A5SS	0.25	50	50	ENSMUST00000194649.2	ENSMUSG00000039221.11	Rpl22l1	chr3	protein_coding	ribosomal protein L22 like 1
chr3	28859843	28860652	+	28859692	28860652	A5SS	0.25	50	50	ENSMUST00000194649.2	ENSMUSG00000039221.11	Rpl22l1	chr3	protein_coding	ribosomal protein L22 like 1
chr3	28859978	28860652	+	28859692	28860652	A5SS	0.25	50	50	ENSMUST00000194649.2	ENSMUSG00000039221.11	Rpl22l1	chr3	protein_coding	ribosomal protein L22 like 1
chr3	28859843	28860652	+	28859730	28860652	A5SS	0.25	50	50	ENSMUST00000195519.6	ENSMUSG00000039221.11	Rpl22l1	chr3	protein_coding	ribosomal protein L22 like 1
chr3	28859978	28860652	+	28859730	28860652	A5SS	0.25	50	50	ENSMUST00000195519.6	ENSMUSG00000039221.11	Rpl22l1	chr3	protein_coding	ribosomal protein L22 like 1
chr3	28859843	28860652	+	28859978	28860652	A5SS	0.25	50	50	ENSMUST00000191667.6	ENSMUSG00000039221.11	Rpl22l1	chr3	protein_coding	ribosomal protein L22 like 1
chr3	29136528	29202496	+	29136359	29202496	A5SS	0.33	50	50	ENSMUST00000124809.8	ENSMUSG00000063600.15	Egfem1	chr3	protein_coding	EGF-like and EMI domain containing 1
chr3	29137087	29202496	+	29136359	29202496	A5SS	0.33	50	50	ENSMUST00000124809.8	ENSMUSG00000063600.15	Egfem1	chr3	protein_coding	EGF-like and EMI domain containing 1
chr3	29207750;29411344	29411294;29637056	+	29207750;29568159	29568037;29637056	MXE	0.5	100	100	ENSMUST00000146943.8	ENSMUSG00000063600.15	Egfem1	chr3	protein_coding	EGF-like and EMI domain containing 1
chr3	29137087	29202496	+	29136528	29202496	A5SS	0.33	50	50	ENSMUST00000146943.8	ENSMUSG00000063600.15	Egfem1	chr3	protein_coding	EGF-like and EMI domain containing 1
chr3	29511967	29568037	+	29207750	29568037	A5SS	0.5	50	50	ENSMUST00000146943.8	ENSMUSG00000063600.15	Egfem1	chr3	protein_coding	EGF-like and EMI domain containing 1
chr3	29711416	29722390	+	29711416;29716648	29716526;29722390	ES	0.5	50	50	ENSMUST00000126420.7	ENSMUSG00000063600.15	Egfem1	chr3	protein_coding	EGF-like and EMI domain containing 1
chr3	29637178	29702366	+	29637178	29711279	A3SS	0.5	50	50	ENSMUST00000118531.8	ENSMUSG00000063600.15	Egfem1	chr3	protein_coding	EGF-like and EMI domain containing 1
chr3	29705040	29711279	+	29637178	29711279	A5SS	0.5	50	50	ENSMUST00000118531.8	ENSMUSG00000063600.15	Egfem1	chr3	protein_coding	EGF-like and EMI domain containing 1
chr3	29411344	29637056	+	29568159	29637056	5pMXE	0.5	50	50	ENSMUST00000140288.2	ENSMUSG00000063600.15	Egfem1	chr3	protein_coding	EGF-like and EMI domain containing 1
chr3	30006999	30011462	-	30006999;30010638	30010455;30011462	ES	0.5	50	50	ENSMUST00000172694.8	ENSMUSG00000027684.17	Mecom	chr3	protein_coding	MDS1 and EVI1 complex locus
chr3	30041326	30051795	-	30041326;30047851	30047635;30051795	ES	0.5	50	50	ENSMUST00000172694.8	ENSMUSG00000027684.17	Mecom	chr3	protein_coding	MDS1 and EVI1 complex locus
chr3	30064046	30194477	-	30064046	30066691	5pMXE	0.2	50	50	ENSMUST00000172694.8	ENSMUSG00000027684.17	Mecom	chr3	protein_coding	MDS1 and EVI1 complex locus
chr3	30064046	30292127	-	30064046	30066691	5pMXE	0.2	50	50	ENSMUST00000172694.8	ENSMUSG00000027684.17	Mecom	chr3	protein_coding	MDS1 and EVI1 complex locus
chr3	30064046	30563579	-	30064046	30066691	5pMXE	0.2	50	50	ENSMUST00000172694.8	ENSMUSG00000027684.17	Mecom	chr3	protein_coding	MDS1 and EVI1 complex locus
chr3	30020968;30026855	30026829;30031408	-	30020968	30031408	cassetteExon	0.5	100	100	ENSMUST00000172694.8	ENSMUSG00000027684.17	Mecom	chr3	protein_coding	MDS1 and EVI1 complex locus
chr3	30035106	30039490	-	30034134	30039490	A3SS	0.33	50	50	ENSMUST00000172694.8	ENSMUSG00000027684.17	Mecom	chr3	protein_coding	MDS1 and EVI1 complex locus
chr3	30038415	30039490	-	30034134	30039490	A3SS	0.33	50	50	ENSMUST00000172694.8	ENSMUSG00000027684.17	Mecom	chr3	protein_coding	MDS1 and EVI1 complex locus
chr3	30039646	30041179	-	30039643	30041179	A3SS	0.5	50	50	ENSMUST00000172694.8	ENSMUSG00000027684.17	Mecom	chr3	protein_coding	MDS1 and EVI1 complex locus
chr3	30064046	30065220	-	30064046	30066691	A5SS	0.2	50	50	ENSMUST00000172694.8	ENSMUSG00000027684.17	Mecom	chr3	protein_coding	MDS1 and EVI1 complex locus
chr3	30064046;30292470	30292127;30563579	-	30064046	30563579	cassetteExon	0.5	100	100	ENSMUST00000173495.8	ENSMUSG00000027684.17	Mecom	chr3	protein_coding	MDS1 and EVI1 complex locus
chr3	30038415	30039490	-	30035106	30039490	A3SS	0.33	50	50	ENSMUST00000173495.8	ENSMUSG00000027684.17	Mecom	chr3	protein_coding	MDS1 and EVI1 complex locus
chr3	30064046	30065220	-	30064046	30563579	A5SS	0.2	50	50	ENSMUST00000173495.8	ENSMUSG00000027684.17	Mecom	chr3	protein_coding	MDS1 and EVI1 complex locus
chr3	30064046	30194477	-	30064046	30563579	A5SS	0.2	50	50	ENSMUST00000173495.8	ENSMUSG00000027684.17	Mecom	chr3	protein_coding	MDS1 and EVI1 complex locus
chr3	30064046	30292127	-	30064046	30194477	5pMXE	0.2	50	50	ENSMUST00000108271.10	ENSMUSG00000027684.17	Mecom	chr3	protein_coding	MDS1 and EVI1 complex locus
chr3	30064046	30065220	-	30064046	30194477	A5SS	0.2	50	50	ENSMUST00000108271.10	ENSMUSG00000027684.17	Mecom	chr3	protein_coding	MDS1 and EVI1 complex locus
chr3	30064046	30563579	-	30064046	30292127	5pMXE	0.2	50	50	ENSMUST00000173059.8	ENSMUSG00000027684.17	Mecom	chr3	protein_coding	MDS1 and EVI1 complex locus
chr3	30069776	30292127	-	30064046	30292127	A3SS	0.33	50	50	ENSMUST00000173059.8	ENSMUSG00000027684.17	Mecom	chr3	protein_coding	MDS1 and EVI1 complex locus
chr3	30291390	30292127	-	30064046	30292127	A3SS	0.33	50	50	ENSMUST00000173059.8	ENSMUSG00000027684.17	Mecom	chr3	protein_coding	MDS1 and EVI1 complex locus
chr3	30064046	30065220	-	30064046	30292127	A5SS	0.2	50	50	ENSMUST00000173059.8	ENSMUSG00000027684.17	Mecom	chr3	protein_coding	MDS1 and EVI1 complex locus
chr3	30292470	30600581	-	30292470	30563579	5pMXE	0.5	50	50	ENSMUST00000173899.8	ENSMUSG00000027684.17	Mecom	chr3	protein_coding	MDS1 and EVI1 complex locus
chr3	30291390	30292127	-	30069776	30292127	A3SS	0.33	50	50	ENSMUST00000173411.8	ENSMUSG00000027684.17	Mecom	chr3	protein_coding	MDS1 and EVI1 complex locus
chr3	30074702	30076698	+	30074702	30103901	A3SS	0.5	50	50	ENSMUST00000125611.8	ENSMUSG00000085702.9	Mecomos	chr3	lncRNA	MDS1 and EVI1 complex locus, opposite strand
chr3	30071751	30074620	+	30072331	30074620	A5SS&ES	0.5	50	50	ENSMUST00000125611.8	ENSMUSG00000085702.9	Mecomos	chr3	lncRNA	MDS1 and EVI1 complex locus, opposite strand
chr3	30665768	30667701	+	30665768;30666701	30666618;30667701	ES	0.5	50	50	ENSMUST00000192715.6	ENSMUSG00000037730.14	Mynn	chr3	protein_coding	myoneurin
chr3	30657819	30661186	+	30657949	30661186	A5SS	0.5	50	50	ENSMUST00000192715.6	ENSMUSG00000037730.14	Mynn	chr3	protein_coding	myoneurin
chr3	30702409	30704054	+	30700462	30704054	A5SS	0.5	50	50	ENSMUST00000108267.8	ENSMUSG00000027703.17	Lrriq4	chr3	protein_coding	leucine-rich repeats and IQ motif containing 4
chr3	30752863	30753848	-	30749779	30753848	A3SS	0.5	50	50	ENSMUST00000126658.8	ENSMUSG00000074653.11	Lrrc31	chr3	protein_coding	leucine rich repeat containing 31
chr3	30805316;30807373	30807249;30808412	+	30805316	30808412	cassetteExon	0.5	100	100	ENSMUST00000174395.8	ENSMUSG00000051860.14	Samd7	chr3	protein_coding	sterile alpha motif domain containing 7
chr3	30808490;30809777	30809684;30810287	+	30808490	30810287	cassetteExon	0.5	100	100	ENSMUST00000174395.8	ENSMUSG00000051860.14	Samd7	chr3	protein_coding	sterile alpha motif domain containing 7
chr3	30910206	30931384	+	30910394	30931384	A5SS	0.33	50	50	ENSMUST00000130294.2	ENSMUSG00000037661.15	Gpr160	chr3	protein_coding	G protein-coupled receptor 160
chr3	30910403	30931384	+	30910394	30931384	A5SS	0.33	50	50	ENSMUST00000130294.2	ENSMUSG00000037661.15	Gpr160	chr3	protein_coding	G protein-coupled receptor 160
chr3	30931710	30949859	+	30931710;30944190	30944091;30949859	ES	0.25	50	50	ENSMUST00000108261.8	ENSMUSG00000037661.15	Gpr160	chr3	protein_coding	G protein-coupled receptor 160
chr3	30944190;30948389	30948278;30949859	+	30944190	30949859	cassetteExon	0.5	100	100	ENSMUST00000108261.8	ENSMUSG00000037661.15	Gpr160	chr3	protein_coding	G protein-coupled receptor 160
chr3	30910206	30931384	+	30910403	30931384	A5SS	0.33	50	50	ENSMUST00000108261.8	ENSMUSG00000037661.15	Gpr160	chr3	protein_coding	G protein-coupled receptor 160
chr3	30931481	30944091	+	30931710	30944091	A5SS	0.5	50	50	ENSMUST00000108261.8	ENSMUSG00000037661.15	Gpr160	chr3	protein_coding	G protein-coupled receptor 160
chr3	30931481	30949859	+	30944190	30949859	A5SS&ES	0.25	50	50	ENSMUST00000108261.8	ENSMUSG00000037661.15	Gpr160	chr3	protein_coding	G protein-coupled receptor 160
chr3	30931481	30949859	+	30931710	30949859	A5SS	0.25	50	50	ENSMUST00000108259.8	ENSMUSG00000037661.15	Gpr160	chr3	protein_coding	G protein-coupled receptor 160
chr3	30948389	30949859	+	30931710	30949859	A5SS	0.25	50	50	ENSMUST00000108259.8	ENSMUSG00000037661.15	Gpr160	chr3	protein_coding	G protein-coupled receptor 160
chr3	30931481;30944190	30944091;30949859	+	30931481	30949859	cassetteExon	0.5	100	100	ENSMUST00000166278.7	ENSMUSG00000037661.15	Gpr160	chr3	protein_coding	G protein-coupled receptor 160
chr3	30948389	30949859	+	30931481	30949859	A5SS	0.25	50	50	ENSMUST00000166278.7	ENSMUSG00000037661.15	Gpr160	chr3	protein_coding	G protein-coupled receptor 160
chr3	30931710	30949859	+	30944190	30949859	A5SS&ES	0.25	50	50	ENSMUST00000194979.6	ENSMUSG00000037661.15	Gpr160	chr3	protein_coding	G protein-coupled receptor 160
chr3	30991305	31002851	-	30991305;30996801	30996558;31002851	ES	0.5	50	50	ENSMUST00000168645.8	ENSMUSG00000037652.16	Phc3	chr3	protein_coding	polyhomeotic 3
chr3	30996801	31005025	-	30996801;31002949	31002851;31005025	ES	0.5	50	50	ENSMUST00000168645.8	ENSMUSG00000037652.16	Phc3	chr3	protein_coding	polyhomeotic 3
chr3	30986041;30990148	30990101;30990434	-	30986041	30990434	cassetteExon	0.5	100	100	ENSMUST00000168645.8	ENSMUSG00000037652.16	Phc3	chr3	protein_coding	polyhomeotic 3
chr3	30986041;30990169	30990101;30990434	-	30986041	30990434	cassetteExon	0.5	100	100	ENSMUST00000168645.8	ENSMUSG00000037652.16	Phc3	chr3	protein_coding	polyhomeotic 3
chr3	31020084	31023523	-	31020084	31023508	A5SS	0.5	50	50	ENSMUST00000168645.8	ENSMUSG00000037652.16	Phc3	chr3	protein_coding	polyhomeotic 3
chr3	30990148	30990434	-	30990169	30990434	A3SS	0.33	50	50	ENSMUST00000046624.12	ENSMUSG00000037652.16	Phc3	chr3	protein_coding	polyhomeotic 3
chr3	30991305;31002949	31002851;31005025	-	30991305;30996801	30996558;31005025	MXE	0.5	100	100	ENSMUST00000108255.8	ENSMUSG00000037652.16	Phc3	chr3	protein_coding	polyhomeotic 3
chr3	31093652	31095239	+	31093652	31095591	A3SS	0.5	50	50	ENSMUST00000108249.9	ENSMUSG00000037643.15	Prkci	chr3	protein_coding	protein kinase C, iota
chr3	31059398	31072699	+	31050234	31072699	A5SS	0.5	50	50	ENSMUST00000108249.9	ENSMUSG00000037643.15	Prkci	chr3	protein_coding	protein kinase C, iota
chr3	31086055	31087327	+	31085373	31087327	A5SS	0.5	50	50	ENSMUST00000108249.9	ENSMUSG00000037643.15	Prkci	chr3	protein_coding	protein kinase C, iota
chr3	31149306	31151419	+	31149306	31150852	A3SS	0.5	50	50	ENSMUST00000118470.8	ENSMUSG00000027660.17	Skil	chr3	protein_coding	SKI-like
chr3	31167789	31170965	+	31167651	31170965	A5SS	0.5	50	50	ENSMUST00000118470.8	ENSMUSG00000027660.17	Skil	chr3	protein_coding	SKI-like
chr3	31149306;31151339	31150852;31151419	+	31149306	31151419	cassetteExon	0.5	100	100	ENSMUST00000123532.2	ENSMUSG00000027660.17	Skil	chr3	protein_coding	SKI-like
chr3	31312173	31312354	-	31312173	31364320	A5SS	0.5	50	50	ENSMUST00000091259.9	ENSMUSG00000069072.10	Slc7a14	chr3	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 14
chr3	31365188	31368949	+	31365188;31368184	31367935;31368949	ES	0.5	50	50	ENSMUST00000129578.3	ENSMUSG00000085953.3	Gm15496	chr3	lncRNA	predicted gene 15496
chr3	31738697	31744627	-	31738697	31741845	5pMXE	0.5	50	50	ENSMUST00000191934.6	ENSMUSG00000103499.6	Gm6558	chr3	transcribed_unprocessed_pseudogene	predicted gene 6558
chr3	31738697	31744627	-	31738697;31742027	31741845;31744627	ES	0.5	50	50	ENSMUST00000195395.6	ENSMUSG00000103499.6	Gm6558	chr3	transcribed_unprocessed_pseudogene	predicted gene 6558
chr3	31957074;31962660	31962561;32210196	+	31957074	32210196	cassetteExon	0.5	100	100	ENSMUST00000119310.8	ENSMUSG00000037610.16	Kcnmb2	chr3	protein_coding	potassium large conductance calcium-activated channel, subfamily M, beta member 2
chr3	31957074	32210196	+	31957074	31962561	A3SS&ES	0.5	50	50	ENSMUST00000178668.2	ENSMUSG00000037610.16	Kcnmb2	chr3	protein_coding	potassium large conductance calcium-activated channel, subfamily M, beta member 2
chr3	32210318	32232980	+	32210318	32252224	A3SS	0.5	50	50	ENSMUST00000194796.2	ENSMUSG00000037610.16	Kcnmb2	chr3	protein_coding	potassium large conductance calcium-activated channel, subfamily M, beta member 2
chr3	32236175	32252224	+	32210318	32252224	A5SS	0.5	50	50	ENSMUST00000194796.2	ENSMUSG00000037610.16	Kcnmb2	chr3	protein_coding	potassium large conductance calcium-activated channel, subfamily M, beta member 2
chr3	32415365	32419315	-	32415365	32419653	A5SS	0.5	50	50	ENSMUST00000029199.11	ENSMUSG00000027663.13	Zmat3	chr3	protein_coding	zinc finger matrin type 3
chr3	32490564	32491267	+	32490706	32491267	A5SS	0.5	50	50	ENSMUST00000108243.8	ENSMUSG00000027665.14	Pik3ca	chr3	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha
chr3	32568603	32571178	+	32568603;32569501	32569433;32571178	ES	0.5	50	50	ENSMUST00000193287.6	ENSMUSG00000027667.14	Zfp639	chr3	protein_coding	zinc finger protein 639
chr3	32564881	32567150	+	32564738	32567150	A5SS	0.33	50	50	ENSMUST00000193287.6	ENSMUSG00000027667.14	Zfp639	chr3	protein_coding	zinc finger protein 639
chr3	32565355	32567150	+	32564738	32567150	A5SS	0.33	50	50	ENSMUST00000193287.6	ENSMUSG00000027667.14	Zfp639	chr3	protein_coding	zinc finger protein 639
chr3	32564881	32567189	+	32564881	32567150	A3SS	0.5	50	50	ENSMUST00000191783.6	ENSMUSG00000027667.14	Zfp639	chr3	protein_coding	zinc finger protein 639
chr3	32565355	32567150	+	32564881	32567150	A5SS	0.33	50	50	ENSMUST00000191783.6	ENSMUSG00000027667.14	Zfp639	chr3	protein_coding	zinc finger protein 639
chr3	32568603	32571178	+	32568603	32569433	A3SS	0.5	50	50	ENSMUST00000194126.6	ENSMUSG00000027667.14	Zfp639	chr3	protein_coding	zinc finger protein 639
chr3	32568603	32571178	+	32569501	32571178	5pMXE	0.5	50	50	ENSMUST00000029203.13	ENSMUSG00000027667.14	Zfp639	chr3	protein_coding	zinc finger protein 639
chr3	32583709	32586047	+	32583844	32586047	A5SS	0.33	50	50	ENSMUST00000091257.11	ENSMUSG00000027668.14	Mfn1	chr3	protein_coding	mitofusin 1
chr3	32585735	32586047	+	32583844	32586047	A5SS	0.33	50	50	ENSMUST00000091257.11	ENSMUSG00000027668.14	Mfn1	chr3	protein_coding	mitofusin 1
chr3	32585735	32586047	+	32583709	32586047	A5SS	0.33	50	50	ENSMUST00000147350.8	ENSMUSG00000027668.14	Mfn1	chr3	protein_coding	mitofusin 1
chr3	32645422	32650426	-	32645422;32647370	32647307;32650426	ES	0.5	50	50	ENSMUST00000155737.8	ENSMUSG00000027669.15	Gnb4	chr3	protein_coding	guanine nucleotide binding protein (G protein), beta 4
chr3	32650532;32651933	32651789;32652275	-	32650532	32652275	cassetteExon	0.5	100	100	ENSMUST00000155737.8	ENSMUSG00000027669.15	Gnb4	chr3	protein_coding	guanine nucleotide binding protein (G protein), beta 4
chr3	32656289;32668495	32668249;32670588	-	32656289	32670588	cassetteExon	0.5	100	100	ENSMUST00000155737.8	ENSMUSG00000027669.15	Gnb4	chr3	protein_coding	guanine nucleotide binding protein (G protein), beta 4
chr3	32766093	32768666	+	32766093;32766424	32766250;32768666	ES	0.5	50	50	ENSMUST00000194781.6	ENSMUSG00000027671.15	Actl6a	chr3	protein_coding	actin-like 6A
chr3	32763029	32766017	+	32760577	32766017	A5SS	0.33	50	50	ENSMUST00000194781.6	ENSMUSG00000027671.15	Actl6a	chr3	protein_coding	actin-like 6A
chr3	32763491	32766017	+	32760577	32766017	A5SS	0.33	50	50	ENSMUST00000194781.6	ENSMUSG00000027671.15	Actl6a	chr3	protein_coding	actin-like 6A
chr3	32763491	32766017	+	32763029	32766017	A5SS	0.33	50	50	ENSMUST00000029214.14	ENSMUSG00000027671.15	Actl6a	chr3	protein_coding	actin-like 6A
chr3	32766093	32768666	+	32766093	32766250	3pMXE	0.5	50	50	ENSMUST00000135400.2	ENSMUSG00000027671.15	Actl6a	chr3	protein_coding	actin-like 6A
chr3	32766424	32768666	+	32766424	32776769	A3SS	0.5	50	50	ENSMUST00000193231.6	ENSMUSG00000027671.15	Actl6a	chr3	protein_coding	actin-like 6A
chr3	32774664	32776769	+	32766424	32776769	A5SS	0.5	50	50	ENSMUST00000193231.6	ENSMUSG00000027671.15	Actl6a	chr3	protein_coding	actin-like 6A
chr3	32785405	32786707	-	32785405	32787738	A5SS	0.5	50	50	ENSMUST00000043966.8	ENSMUSG00000037531.9	Mrpl47	chr3	protein_coding	mitochondrial ribosomal protein L47
chr3	32800663	32801746	+	32800663	32801877	A3SS	0.5	50	50	ENSMUST00000127477.8	ENSMUSG00000027673.13	Ndufb5	chr3	protein_coding	NADH:ubiquinone oxidoreductase subunit B5
chr3	32802716	32802936	+	32802716	32805178	A3SS	0.5	50	50	ENSMUST00000127477.8	ENSMUSG00000027673.13	Ndufb5	chr3	protein_coding	NADH:ubiquinone oxidoreductase subunit B5
chr3	32791379	32799003	+	32791354	32799003	A5SS	0.33	50	50	ENSMUST00000127477.8	ENSMUSG00000027673.13	Ndufb5	chr3	protein_coding	NADH:ubiquinone oxidoreductase subunit B5
chr3	32795927	32799003	+	32791354	32799003	A5SS	0.33	50	50	ENSMUST00000127477.8	ENSMUSG00000027673.13	Ndufb5	chr3	protein_coding	NADH:ubiquinone oxidoreductase subunit B5
chr3	32795927	32799003	+	32791379	32799003	A5SS	0.33	50	50	ENSMUST00000029217.12	ENSMUSG00000027673.13	Ndufb5	chr3	protein_coding	NADH:ubiquinone oxidoreductase subunit B5
chr3	32892110	32901962	+	32892110	32901959	A3SS	0.5	50	50	ENSMUST00000072312.12	ENSMUSG00000056900.14	Usp13	chr3	protein_coding	ubiquitin specific peptidase 13 (isopeptidase T-3)
chr3	32985891	32987370	+	32985891	32987289	A3SS	0.5	50	50	ENSMUST00000072312.12	ENSMUSG00000056900.14	Usp13	chr3	protein_coding	ubiquitin specific peptidase 13 (isopeptidase T-3)
chr3	33029349	33033948	+	33026350	33033948	A5SS	0.5	50	50	ENSMUST00000192259.2	ENSMUSG00000104283.2	Gm37459	chr3	lncRNA	predicted gene, 37459
chr3	33134685	33196998	-	33134685	33136125	5pMXE	0.5	50	50	ENSMUST00000108225.10	ENSMUSG00000027674.17	Pex5l	chr3	protein_coding	peroxisomal biogenesis factor 5-like
chr3	33069225;33078949	33078845;33134614	-	33069225	33134614	cassetteExon	0.5	100	100	ENSMUST00000108225.10	ENSMUSG00000027674.17	Pex5l	chr3	protein_coding	peroxisomal biogenesis factor 5-like
chr3	33060195	33061271	-	33060192	33061271	A3SS	0.5	50	50	ENSMUST00000108225.10	ENSMUSG00000027674.17	Pex5l	chr3	protein_coding	peroxisomal biogenesis factor 5-like
chr3	33013011	33039140	-	33013011	33047055	A5SS	0.5	50	50	ENSMUST00000108225.10	ENSMUSG00000027674.17	Pex5l	chr3	protein_coding	peroxisomal biogenesis factor 5-like
chr3	33136152	33136965	-	33136378	33136965	A3SS	0.33	50	50	ENSMUST00000193681.6	ENSMUSG00000027674.17	Pex5l	chr3	protein_coding	peroxisomal biogenesis factor 5-like
chr3	33136284	33136965	-	33136378	33136965	A3SS	0.33	50	50	ENSMUST00000193681.6	ENSMUSG00000027674.17	Pex5l	chr3	protein_coding	peroxisomal biogenesis factor 5-like
chr3	33136152	33136965	-	33136284	33136965	A3SS	0.33	50	50	ENSMUST00000192093.6	ENSMUSG00000027674.17	Pex5l	chr3	protein_coding	peroxisomal biogenesis factor 5-like
chr3	33069225;33134685	33134614;33196998	-	33069225	33196998	cassetteExon	0.5	100	100	ENSMUST00000108226.8	ENSMUSG00000027674.17	Pex5l	chr3	protein_coding	peroxisomal biogenesis factor 5-like
chr3	33186144	33196998	-	33069225	33196998	A3SS	0.33	50	50	ENSMUST00000108226.8	ENSMUSG00000027674.17	Pex5l	chr3	protein_coding	peroxisomal biogenesis factor 5-like
chr3	33069225	33078845	-	33069225	33196998	A5SS	0.33	50	50	ENSMUST00000108226.8	ENSMUSG00000027674.17	Pex5l	chr3	protein_coding	peroxisomal biogenesis factor 5-like
chr3	33186144	33196998	-	33134685	33196998	A3SS	0.33	50	50	ENSMUST00000108219.3	ENSMUSG00000027674.17	Pex5l	chr3	protein_coding	peroxisomal biogenesis factor 5-like
chr3	33857353	33858149	+	33857353;33857754	33857599;33858149	ES	0.5	50	50	ENSMUST00000099153.10	ENSMUSG00000027677.18	Ttc14	chr3	protein_coding	tetratricopeptide repeat domain 14
chr3	33858689	33860965	+	33858689;33858911	33858789;33860965	ES	0.5	50	50	ENSMUST00000099153.10	ENSMUSG00000027677.18	Ttc14	chr3	protein_coding	tetratricopeptide repeat domain 14
chr3	33854585;33854823	33854731;33855105	+	33854585	33855105	cassetteExon	0.5	100	100	ENSMUST00000099153.10	ENSMUSG00000027677.18	Ttc14	chr3	protein_coding	tetratricopeptide repeat domain 14
chr3	33854585	33855105	+	33854823	33855105	A5SS	0.5	50	50	ENSMUST00000200271.5	ENSMUSG00000027677.18	Ttc14	chr3	protein_coding	tetratricopeptide repeat domain 14
chr3	33861082	33862005	+	33861082	33861988	A3SS	0.5	50	50	ENSMUST00000198529.5	ENSMUSG00000027677.18	Ttc14	chr3	protein_coding	tetratricopeptide repeat domain 14
chr3	33861574	33861988	+	33861082	33861988	A5SS	0.5	50	50	ENSMUST00000198529.5	ENSMUSG00000027677.18	Ttc14	chr3	protein_coding	tetratricopeptide repeat domain 14
chr3	33872946	33873957	-	33871100	33873957	A3SS	0.5	50	50	ENSMUST00000029222.8	ENSMUSG00000027676.12	Ccdc39	chr3	protein_coding	coiled-coil domain containing 39
chr3	33875565	33879540	-	33875663	33879540	A3SS	0.5	50	50	ENSMUST00000029222.8	ENSMUSG00000027676.12	Ccdc39	chr3	protein_coding	coiled-coil domain containing 39
chr3	33895337	33898147	-	33895337	33898254	A5SS	0.5	50	50	ENSMUST00000029222.8	ENSMUSG00000027676.12	Ccdc39	chr3	protein_coding	coiled-coil domain containing 39
chr3	33925223	33925995	-	33925223	33951487	A5SS	0.5	50	50	ENSMUST00000200253.2	ENSMUSG00000105475.2	4930431L21Rik	chr3	lncRNA	RIKEN cDNA 4930431L21 gene
chr3	34074312	34095212	+	34074312;34093728	34093676;34095212	ES	0.5	50	50	ENSMUST00000001620.13	ENSMUSG00000027680.16	Fxr1	chr3	protein_coding	fragile X mental retardation gene 1, autosomal homolog
chr3	34093728	34100181	+	34093728;34095305	34095212;34100181	ES	0.5	50	50	ENSMUST00000001620.13	ENSMUSG00000027680.16	Fxr1	chr3	protein_coding	fragile X mental retardation gene 1, autosomal homolog
chr3	34118468	34122310	+	34118468;34119203	34119123;34122310	ES	0.5	50	50	ENSMUST00000001620.13	ENSMUSG00000027680.16	Fxr1	chr3	protein_coding	fragile X mental retardation gene 1, autosomal homolog
chr3	34074312;34093728	34093676;34100181	+	34074312;34095305	34095212;34100181	MXE	0.5	100	100	ENSMUST00000167354.8	ENSMUSG00000027680.16	Fxr1	chr3	protein_coding	fragile X mental retardation gene 1, autosomal homolog
chr3	34118468;34122401	34122310;34123066	+	34118468	34123066	cassetteExon	0.5	100	100	ENSMUST00000167354.8	ENSMUSG00000027680.16	Fxr1	chr3	protein_coding	fragile X mental retardation gene 1, autosomal homolog
chr3	34118468	34119123	+	34118468	34123066	A3SS	0.33	50	50	ENSMUST00000167354.8	ENSMUSG00000027680.16	Fxr1	chr3	protein_coding	fragile X mental retardation gene 1, autosomal homolog
chr3	34074312	34095212	+	34093728	34095212	5pMXE	0.5	50	50	ENSMUST00000196519.2	ENSMUSG00000027680.16	Fxr1	chr3	protein_coding	fragile X mental retardation gene 1, autosomal homolog
chr3	34093728	34100181	+	34093728	34095212	3pMXE	0.5	50	50	ENSMUST00000196519.2	ENSMUSG00000027680.16	Fxr1	chr3	protein_coding	fragile X mental retardation gene 1, autosomal homolog
chr3	34134306	34135335	-	34134306;34134431	34134380;34135335	ES	0.5	50	50	ENSMUST00000011029.12	ENSMUSG00000027679.14	Dnajc19	chr3	protein_coding	DnaJ heat shock protein family (Hsp40) member C19
chr3	34131673	34132924	-	34112263	34132924	A3SS	0.5	50	50	ENSMUST00000011029.12	ENSMUSG00000027679.14	Dnajc19	chr3	protein_coding	DnaJ heat shock protein family (Hsp40) member C19
chr3	34562735	34729818	+	34562735	34692507	3pMXE	0.33	50	50	ENSMUST00000196793.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34562735;34666032	34665848;34692507	+	34562735	34692507	cassetteExon	0.5	100	100	ENSMUST00000196793.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34251178	34251310	+	34158720	34251310	A5SS	0.5	50	50	ENSMUST00000196793.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34614718	34692507	+	34562735	34692507	A5SS	0.14	50	50	ENSMUST00000196793.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34614931	34692507	+	34562735	34692507	A5SS	0.14	50	50	ENSMUST00000196793.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34644219	34692507	+	34562735	34692507	A5SS	0.14	50	50	ENSMUST00000196793.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34684380	34692507	+	34562735	34692507	A5SS	0.14	50	50	ENSMUST00000196793.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34691415	34692507	+	34562735	34692507	A5SS	0.14	50	50	ENSMUST00000196793.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34562735;34692788	34692507;34729818	+	34562735	34729818	cassetteExon	0.5	100	100	ENSMUST00000196243.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34562735	34665848	+	34562735	34729818	A3SS	0.33	50	50	ENSMUST00000196243.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34707433	34729818	+	34562735	34729818	A5SS	0.2	50	50	ENSMUST00000196243.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34710992	34729818	+	34562735	34729818	A5SS	0.2	50	50	ENSMUST00000196243.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34719597	34729818	+	34562735	34729818	A5SS	0.2	50	50	ENSMUST00000196243.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34614718	34665848	+	34562735	34665848	A5SS	0.5	50	50	ENSMUST00000196058.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34614718	34692507	+	34666032	34692507	A5SS&ES	0.14	50	50	ENSMUST00000196058.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34614931	34692507	+	34666032	34692507	A5SS&ES	0.14	50	50	ENSMUST00000196058.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34644219	34692507	+	34666032	34692507	A5SS&ES	0.14	50	50	ENSMUST00000196058.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34684380	34692507	+	34666032	34692507	A5SS	0.14	50	50	ENSMUST00000196058.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34691415	34692507	+	34666032	34692507	A5SS	0.14	50	50	ENSMUST00000196058.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34614718;34614931	34614865;34692507	+	34614718	34692507	cassetteExon	0.5	100	100	ENSMUST00000200414.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34614718;34666032	34665848;34692507	+	34614718	34692507	cassetteExon	0.5	100	100	ENSMUST00000200414.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34692788;34707433	34707327;34729818	+	34692788	34729818	cassetteExon	0.5	100	100	ENSMUST00000200414.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34644219	34692507	+	34614718	34692507	A5SS	0.14	50	50	ENSMUST00000200414.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34684380	34692507	+	34614718	34692507	A5SS	0.14	50	50	ENSMUST00000200414.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34691415	34692507	+	34614718	34692507	A5SS	0.14	50	50	ENSMUST00000200414.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34710992	34729818	+	34692788	34729818	A5SS	0.25	50	50	ENSMUST00000200414.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34719597	34729818	+	34692788	34729818	A5SS	0.25	50	50	ENSMUST00000200414.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34614718;34666032	34665848;34692507	+	34614718;34614931	34614865;34692507	MXE	0.5	100	100	ENSMUST00000197977.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34614931	34627820	+	34614931	34692507	A3SS	0.5	50	50	ENSMUST00000197977.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34644219	34692507	+	34614931	34692507	A5SS	0.16	50	50	ENSMUST00000197977.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34684380	34692507	+	34614931	34692507	A5SS	0.16	50	50	ENSMUST00000197977.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34691415	34692507	+	34614931	34692507	A5SS	0.16	50	50	ENSMUST00000197977.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34710992	34729818	+	34707433	34729818	A5SS	0.25	50	50	ENSMUST00000197977.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34719597	34729818	+	34707433	34729818	A5SS	0.25	50	50	ENSMUST00000197977.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34614718;34614931	34614865;34692507	+	34614718;34684380	34665848;34692507	MXE	0.5	100	100	ENSMUST00000196795.2	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34644219	34692507	+	34684380	34692507	A5SS&ES	0.16	50	50	ENSMUST00000196795.2	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34691415	34692507	+	34684380	34692507	A5SS	0.16	50	50	ENSMUST00000196795.2	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34691415	34692507	+	34644219	34692507	A5SS	0.14	50	50	ENSMUST00000196987.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34562735	34729818	+	34692788	34729818	5pMXE	0.2	50	50	ENSMUST00000199171.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34730119	34736583	+	34730119	34732205	3pMXE	0.5	50	50	ENSMUST00000199171.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34730009	34732205	+	34730119	34732205	A5SS	0.5	50	50	ENSMUST00000199171.5	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34719597	34729818	+	34710992	34729818	A5SS	0.2	50	50	ENSMUST00000198758.2	ENSMUSG00000105265.6	Sox2ot	chr3	lncRNA	SOX2 overlapping transcript (non-protein coding)
chr3	34764507;34768186	34768116;34770707	-	34764507	34770707	cassetteExon	0.5	100	100	ENSMUST00000196308.5	ENSMUSG00000105153.5	Gm3143	chr3	lncRNA	predicted gene 3143
chr3	34764078	34764316	-	34755648	34764316	A3SS	0.5	50	50	ENSMUST00000196308.5	ENSMUSG00000105153.5	Gm3143	chr3	lncRNA	predicted gene 3143
chr3	34880857;34892070	34891960;34922015	+	34880857	34922015	cassetteExon	0.5	100	100	ENSMUST00000238705.2	ENSMUSG00000114832.3	Gm21388	chr3	lncRNA	predicted gene, 21388
chr3	34880857	34891198	+	34880857	34922015	A3SS	0.33	50	50	ENSMUST00000238705.2	ENSMUSG00000114832.3	Gm21388	chr3	lncRNA	predicted gene, 21388
chr3	34880857	34891960	+	34880857;34891332	34891198;34891960	ES	0.5	50	50	ENSMUST00000238622.2	ENSMUSG00000114832.3	Gm21388	chr3	lncRNA	predicted gene, 21388
chr3	34892070	34923970	+	34892070	34922015	A3SS&ES	0.5	50	50	ENSMUST00000238622.2	ENSMUSG00000114832.3	Gm21388	chr3	lncRNA	predicted gene, 21388
chr3	34880857	34891960	+	34891332	34891960	5pMXE	0.5	50	50	ENSMUST00000238552.2	ENSMUSG00000114832.3	Gm21388	chr3	lncRNA	predicted gene, 21388
chr3	35693837;35694513	35694231;35696066	-	35693837	35696066	cassetteExon	0.5	100	100	ENSMUST00000198751.5	ENSMUSG00000105662.5	Gm6639	chr3	lncRNA	predicted gene 6639
chr3	35696227;35696659	35696484;35700775	-	35696227	35700775	cassetteExon	0.5	100	100	ENSMUST00000198751.5	ENSMUSG00000105662.5	Gm6639	chr3	lncRNA	predicted gene 6639
chr3	35674066	35682986	-	35681681	35682986	A3SS&ES	0.5	50	50	ENSMUST00000198751.5	ENSMUSG00000105662.5	Gm6639	chr3	lncRNA	predicted gene 6639
chr3	35692060	35693658	-	35691940	35693658	A3SS	0.5	50	50	ENSMUST00000198751.5	ENSMUSG00000105662.5	Gm6639	chr3	lncRNA	predicted gene 6639
chr3	35703005	35704857	-	35703097	35704857	A3SS	0.5	50	50	ENSMUST00000198751.5	ENSMUSG00000105662.5	Gm6639	chr3	lncRNA	predicted gene 6639
chr3	35683123	35683838	-	35683123	35683867	A5SS	0.33	50	50	ENSMUST00000198751.5	ENSMUSG00000105662.5	Gm6639	chr3	lncRNA	predicted gene 6639
chr3	35683988	35685026	-	35683988	35691045	A5SS	0.5	50	50	ENSMUST00000198751.5	ENSMUSG00000105662.5	Gm6639	chr3	lncRNA	predicted gene 6639
chr3	35718011	35720061	-	35718011	35720232	A5SS	0.5	50	50	ENSMUST00000198751.5	ENSMUSG00000105662.5	Gm6639	chr3	lncRNA	predicted gene 6639
chr3	35691228	35691682	-	35683123	35691682	A3SS	0.5	50	50	ENSMUST00000196841.5	ENSMUSG00000105662.5	Gm6639	chr3	lncRNA	predicted gene 6639
chr3	35683123	35683838	-	35683123	35691682	A5SS	0.33	50	50	ENSMUST00000196841.5	ENSMUSG00000105662.5	Gm6639	chr3	lncRNA	predicted gene 6639
chr3	35683123	35683867	-	35683123	35691682	A5SS	0.33	50	50	ENSMUST00000196841.5	ENSMUSG00000105662.5	Gm6639	chr3	lncRNA	predicted gene 6639
chr3	35882852	35885515	+	35882852	35883566	3pMXE	0.5	50	50	ENSMUST00000200445.5	ENSMUSG00000037400.18	Atp11b	chr3	protein_coding	ATPase, class VI, type 11B
chr3	35862237	35863506	+	35861114	35863506	A5SS	0.5	50	50	ENSMUST00000200445.5	ENSMUSG00000037400.18	Atp11b	chr3	protein_coding	ATPase, class VI, type 11B
chr3	35893363;35895264	35895179;35903583	+	35893363	35903583	cassetteExon	0.5	100	100	ENSMUST00000196700.5	ENSMUSG00000037400.18	Atp11b	chr3	protein_coding	ATPase, class VI, type 11B
chr3	35893363;35897845	35897720;35903583	+	35893363	35903583	cassetteExon	0.5	100	100	ENSMUST00000196700.5	ENSMUSG00000037400.18	Atp11b	chr3	protein_coding	ATPase, class VI, type 11B
chr3	35893363;35897845	35897720;35903583	+	35893363;35895264	35895179;35903583	MXE	0.5	100	100	ENSMUST00000198599.2	ENSMUSG00000037400.18	Atp11b	chr3	protein_coding	ATPase, class VI, type 11B
chr3	35895264;35897845	35897720;35903583	+	35895264	35903583	cassetteExon	0.5	100	100	ENSMUST00000198599.2	ENSMUSG00000037400.18	Atp11b	chr3	protein_coding	ATPase, class VI, type 11B
chr3	35893363;35895264	35895179;35897720	+	35893363	35897720	cassetteExon	0.5	100	100	ENSMUST00000196409.2	ENSMUSG00000037400.18	Atp11b	chr3	protein_coding	ATPase, class VI, type 11B
chr3	35952024	35973150	-	35952024;35970499	35970369;35973150	ES	0.5	50	50	ENSMUST00000178098.8	ENSMUSG00000027708.15	Dcun1d1	chr3	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
chr3	35975336	35986934	-	35975336	35986342	5pMXE	0.16	50	50	ENSMUST00000178098.8	ENSMUSG00000027708.15	Dcun1d1	chr3	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
chr3	35975336	35991314	-	35975336	35986342	5pMXE	0.16	50	50	ENSMUST00000178098.8	ENSMUSG00000027708.15	Dcun1d1	chr3	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
chr3	35975336	35991497	-	35975336	35986342	5pMXE	0.16	50	50	ENSMUST00000178098.8	ENSMUSG00000027708.15	Dcun1d1	chr3	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
chr3	35952024;35963428	35963341;35970369	-	35952024	35970369	cassetteExon	0.5	100	100	ENSMUST00000178098.8	ENSMUSG00000027708.15	Dcun1d1	chr3	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
chr3	35970499	35973271	-	35970499	35973150	A5SS	0.5	50	50	ENSMUST00000178098.8	ENSMUSG00000027708.15	Dcun1d1	chr3	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
chr3	35973318	35975262	-	35973318	35975120	A5SS	0.5	50	50	ENSMUST00000178098.8	ENSMUSG00000027708.15	Dcun1d1	chr3	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
chr3	35975336	35984070	-	35975336	35986342	A5SS	0.16	50	50	ENSMUST00000178098.8	ENSMUSG00000027708.15	Dcun1d1	chr3	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
chr3	35975336	35984095	-	35975336	35986342	A5SS	0.16	50	50	ENSMUST00000178098.8	ENSMUSG00000027708.15	Dcun1d1	chr3	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
chr3	35975336	35991314	-	35975336	35986934	5pMXE	0.16	50	50	ENSMUST00000108182.10	ENSMUSG00000027708.15	Dcun1d1	chr3	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
chr3	35975336	35991497	-	35975336	35986934	5pMXE	0.16	50	50	ENSMUST00000108182.10	ENSMUSG00000027708.15	Dcun1d1	chr3	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
chr3	35975336	35984070	-	35975336	35986934	A5SS	0.16	50	50	ENSMUST00000108182.10	ENSMUSG00000027708.15	Dcun1d1	chr3	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
chr3	35975336	35984095	-	35975336	35986934	A5SS	0.16	50	50	ENSMUST00000108182.10	ENSMUSG00000027708.15	Dcun1d1	chr3	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
chr3	35975336	35991314	-	35975336	35984095	5pMXE	0.16	50	50	ENSMUST00000198389.5	ENSMUSG00000027708.15	Dcun1d1	chr3	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
chr3	35975336	35991497	-	35975336	35984095	5pMXE	0.16	50	50	ENSMUST00000198389.5	ENSMUSG00000027708.15	Dcun1d1	chr3	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
chr3	35975336	35984070	-	35975336	35984095	A5SS	0.16	50	50	ENSMUST00000198389.5	ENSMUSG00000027708.15	Dcun1d1	chr3	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
chr3	35952024	35973150	-	35952024	35970369	A5SS&ES	0.33	50	50	ENSMUST00000197489.5	ENSMUSG00000027708.15	Dcun1d1	chr3	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
chr3	35952024	35963341	-	35952024	35973150	A5SS	0.33	50	50	ENSMUST00000197546.5	ENSMUSG00000027708.15	Dcun1d1	chr3	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
chr3	35975336;35991381	35991314;35991497	-	35975336	35991497	cassetteExon	0.5	100	100	ENSMUST00000148465.8	ENSMUSG00000027708.15	Dcun1d1	chr3	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
chr3	35975336	35984070	-	35975336	35991497	A5SS	0.16	50	50	ENSMUST00000148465.8	ENSMUSG00000027708.15	Dcun1d1	chr3	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
chr3	35952024	35970369	-	35952024	35963341	5pMXE	0.33	50	50	ENSMUST00000196261.2	ENSMUSG00000027708.15	Dcun1d1	chr3	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
chr3	35952024	35970369	-	35963428	35970369	3pMXE	0.5	50	50	ENSMUST00000196263.5	ENSMUSG00000027708.15	Dcun1d1	chr3	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
chr3	35952024	35973150	-	35970499	35973150	3pMXE	0.5	50	50	ENSMUST00000196115.2	ENSMUSG00000027708.15	Dcun1d1	chr3	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
chr3	35975336	35991314	-	35975336	35984070	5pMXE	0.16	50	50	ENSMUST00000196270.5	ENSMUSG00000027708.15	Dcun1d1	chr3	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
chr3	35991847	36044874	+	35991847	35996595	3pMXE	0.5	50	50	ENSMUST00000122858.6	ENSMUSG00000085655.6	Gm15952	chr3	lncRNA	predicted gene 15952
chr3	36030053;36030725	36030628;36030810	-	36030053	36030810	cassetteExon	0.5	100	100	ENSMUST00000199113.5	ENSMUSG00000027709.10	Mccc1	chr3	protein_coding	methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)
chr3	36018613	36022573	-	36018629	36022573	A3SS	0.5	50	50	ENSMUST00000199113.5	ENSMUSG00000027709.10	Mccc1	chr3	protein_coding	methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)
chr3	36039242	36043993	-	36039242	36043982	A5SS	0.5	50	50	ENSMUST00000199113.5	ENSMUSG00000027709.10	Mccc1	chr3	protein_coding	methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)
chr3	36048160	36054630	-	36048160	36049930	5pMXE	0.5	50	50	ENSMUST00000198515.5	ENSMUSG00000027709.10	Mccc1	chr3	protein_coding	methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)
chr3	36030053	36030810	-	36030053	36030628	5pMXE	0.5	50	50	ENSMUST00000197580.2	ENSMUSG00000027709.10	Mccc1	chr3	protein_coding	methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)
chr3	36051720	36054630	-	36048160	36054630	A3SS	0.5	50	50	ENSMUST00000200162.2	ENSMUSG00000027709.10	Mccc1	chr3	protein_coding	methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)
chr3	36058894	36059457	+	36058894;36059196	36059121;36059457	ES	0.5	50	50	ENSMUST00000137198.8	ENSMUSG00000086392.10	Mccc1os	chr3	lncRNA	methylcrotonoyl-Coenzyme A carboxylase 1 (alpha), opposite strand
chr3	36079590	36080004	-	36079590	36080058	A5SS	0.5	50	50	ENSMUST00000200469.5	ENSMUSG00000047696.17	Ccdc144b	chr3	protein_coding	coiled-coil domain containing 144B
chr3	36128605	36130125	+	36128605;36129492	36129392;36130125	ES	0.5	50	50	ENSMUST00000011492.15	ENSMUSG00000027710.15	Acad9	chr3	protein_coding	acyl-Coenzyme A dehydrogenase family, member 9
chr3	36136377	36139638	+	36136377	36139563	A3SS	0.5	50	50	ENSMUST00000011492.15	ENSMUSG00000027710.15	Acad9	chr3	protein_coding	acyl-Coenzyme A dehydrogenase family, member 9
chr3	36139691	36141909	+	36139691	36141869	A3SS	0.5	50	50	ENSMUST00000011492.15	ENSMUSG00000027710.15	Acad9	chr3	protein_coding	acyl-Coenzyme A dehydrogenase family, member 9
chr3	36143041	36145071	+	36143041	36143481	A3SS&ES	0.5	50	50	ENSMUST00000011492.15	ENSMUSG00000027710.15	Acad9	chr3	protein_coding	acyl-Coenzyme A dehydrogenase family, member 9
chr3	36128605	36130125	+	36129492	36130125	A5SS	0.5	50	50	ENSMUST00000198987.5	ENSMUSG00000027710.15	Acad9	chr3	protein_coding	acyl-Coenzyme A dehydrogenase family, member 9
chr3	36205455	36213671	+	36205344	36213671	A5SS	0.5	50	50	ENSMUST00000197653.5	ENSMUSG00000033883.12	Zfp267	chr3	protein_coding	zinc finger protein 267
chr3	36235191	36236603	-	36235191	36236716	A5SS	0.5	50	50	ENSMUST00000197447.5	ENSMUSG00000058400.14	Qrfpr	chr3	protein_coding	pyroglutamylated RFamide peptide receptor
chr3	36516143	36518117	-	36511198	36518117	A3SS	0.5	50	50	ENSMUST00000199478.2	ENSMUSG00000027712.14	Anxa5	chr3	protein_coding	annexin A5
chr3	36511198	36511608	-	36511198	36518117	A5SS	0.5	50	50	ENSMUST00000199478.2	ENSMUSG00000027712.14	Anxa5	chr3	protein_coding	annexin A5
chr3	36571269	36574502	-	36571269	36586261	A5SS	0.5	50	50	ENSMUST00000238836.2	ENSMUSG00000085007.4	Smim43	chr3	protein_coding	small integral membrane protein 43
chr3	36606900	36607955	+	36606900;36607278	36607184;36607955	ES	0.5	50	50	ENSMUST00000155866.8	ENSMUSG00000027714.12	Exosc9	chr3	protein_coding	exosome component 9
chr3	36607278	36608189	+	36607278;36608074	36607955;36608189	ES	0.5	50	50	ENSMUST00000155866.8	ENSMUSG00000027714.12	Exosc9	chr3	protein_coding	exosome component 9
chr3	36616313	36617262	+	36616313	36617222	A3SS	0.5	50	50	ENSMUST00000155866.8	ENSMUSG00000027714.12	Exosc9	chr3	protein_coding	exosome component 9
chr3	36611144	36615252	+	36611118	36615252	A5SS	0.5	50	50	ENSMUST00000155866.8	ENSMUSG00000027714.12	Exosc9	chr3	protein_coding	exosome component 9
chr3	36611144	36614132	+	36611144	36615252	A3SS	0.5	50	50	ENSMUST00000029269.12	ENSMUSG00000027714.12	Exosc9	chr3	protein_coding	exosome component 9
chr3	36606900;36608074	36607955;36608189	+	36606900;36607278	36607184;36608189	MXE	0.5	100	100	ENSMUST00000138636.8	ENSMUSG00000027714.12	Exosc9	chr3	protein_coding	exosome component 9
chr3	36607278	36608189	+	36607278	36607955	A3SS	0.5	50	50	ENSMUST00000149041.8	ENSMUSG00000027714.12	Exosc9	chr3	protein_coding	exosome component 9
chr3	36606900	36607955	+	36607278	36607955	A5SS	0.5	50	50	ENSMUST00000133854.4	ENSMUSG00000027714.12	Exosc9	chr3	protein_coding	exosome component 9
chr3	36623238;36624314	36624225;36624885	-	36623238	36624885	cassetteExon	0.5	100	100	ENSMUST00000029270.10	ENSMUSG00000027715.10	Ccna2	chr3	protein_coding	cyclin A2
chr3	36664777	36667399	-	36664777;36666226	36666161;36667399	ES	0.5	50	50	ENSMUST00000040148.11	ENSMUSG00000037325.11	Bbs7	chr3	protein_coding	Bardet-Biedl syndrome 7 (human)
chr3	36674906	36675346	-	36674906	36675412	A5SS	0.5	50	50	ENSMUST00000129322.8	ENSMUSG00000027716.14	Trpc3	chr3	protein_coding	transient receptor potential cation channel, subfamily C, member 3
chr3	36917478	36918536	+	36917428	36918536	A5SS	0.33	50	50	ENSMUST00000198742.5	ENSMUSG00000037270.19	4932438A13Rik	chr3	protein_coding	RIKEN cDNA 4932438A13 gene
chr3	36917497	36918536	+	36917428	36918536	A5SS	0.33	50	50	ENSMUST00000198742.5	ENSMUSG00000037270.19	4932438A13Rik	chr3	protein_coding	RIKEN cDNA 4932438A13 gene
chr3	36941440	36941824	+	36941449	36941824	A5SS	0.5	50	50	ENSMUST00000198742.5	ENSMUSG00000037270.19	4932438A13Rik	chr3	protein_coding	RIKEN cDNA 4932438A13 gene
chr3	37065943;37066834	37066634;37067029	+	37065943	37067029	cassetteExon	0.5	100	100	ENSMUST00000057272.15	ENSMUSG00000037270.19	4932438A13Rik	chr3	protein_coding	RIKEN cDNA 4932438A13 gene
chr3	37076623;37077181	37077119;37080239	+	37076623	37080239	cassetteExon	0.5	100	100	ENSMUST00000057272.15	ENSMUSG00000037270.19	4932438A13Rik	chr3	protein_coding	RIKEN cDNA 4932438A13 gene
chr3	36985284	36991141	+	36985284	36991138	A3SS	0.5	50	50	ENSMUST00000057272.15	ENSMUSG00000037270.19	4932438A13Rik	chr3	protein_coding	RIKEN cDNA 4932438A13 gene
chr3	37003361	37004032	+	37003361	37004035	A3SS	0.5	50	50	ENSMUST00000057272.15	ENSMUSG00000037270.19	4932438A13Rik	chr3	protein_coding	RIKEN cDNA 4932438A13 gene
chr3	37076623	37080380	+	37076623	37080239	A3SS	0.33	50	50	ENSMUST00000057272.15	ENSMUSG00000037270.19	4932438A13Rik	chr3	protein_coding	RIKEN cDNA 4932438A13 gene
chr3	36917478	36918536	+	36917497	36918536	A5SS	0.33	50	50	ENSMUST00000057272.15	ENSMUSG00000037270.19	4932438A13Rik	chr3	protein_coding	RIKEN cDNA 4932438A13 gene
chr3	36944145	36944944	+	36944051	36944944	A5SS	0.5	50	50	ENSMUST00000057272.15	ENSMUSG00000037270.19	4932438A13Rik	chr3	protein_coding	RIKEN cDNA 4932438A13 gene
chr3	36974049	36974329	+	36974182	36974329	A5SS	0.5	50	50	ENSMUST00000057272.15	ENSMUSG00000037270.19	4932438A13Rik	chr3	protein_coding	RIKEN cDNA 4932438A13 gene
chr3	37084792	37086514	+	37084897	37086514	A5SS	0.5	50	50	ENSMUST00000057272.15	ENSMUSG00000037270.19	4932438A13Rik	chr3	protein_coding	RIKEN cDNA 4932438A13 gene
chr3	37076623	37080380	+	37076623	37077119	A3SS&ES	0.33	50	50	ENSMUST00000146948.8	ENSMUSG00000037270.19	4932438A13Rik	chr3	protein_coding	RIKEN cDNA 4932438A13 gene
chr3	37106641	37114005	-	37106641;37112888	37112860;37114005	ES	0.5	50	50	ENSMUST00000126099.2	ENSMUSG00000086090.2	Gm12531	chr3	lncRNA	predicted gene 12531
chr3	37134060	37137365	+	37134060	37137332	A3SS	0.5	50	50	ENSMUST00000144629.8	ENSMUSG00000027719.16	Adad1	chr3	protein_coding	adenosine deaminase domain containing 1 (testis specific)
chr3	37117863	37118330	+	37117989	37118330	A5SS	0.5	50	50	ENSMUST00000144629.8	ENSMUSG00000027719.16	Adad1	chr3	protein_coding	adenosine deaminase domain containing 1 (testis specific)
chr3	37364588	37366680	-	37364588	37366506	5pMXE	0.5	50	50	ENSMUST00000071400.13	ENSMUSG00000045031.19	Cetn4	chr3	protein_coding	centrin 4
chr3	37363330;37364214	37364086;37364442	-	37363330;37363631	37363494;37364442	MXE	0.5	100	100	ENSMUST00000071400.13	ENSMUSG00000045031.19	Cetn4	chr3	protein_coding	centrin 4
chr3	37363631;37364214	37364086;37364442	-	37363631	37364442	cassetteExon	0.5	100	100	ENSMUST00000071400.13	ENSMUSG00000045031.19	Cetn4	chr3	protein_coding	centrin 4
chr3	37363330	37364086	-	37363330;37363631	37363494;37364086	ES	0.5	50	50	ENSMUST00000102955.11	ENSMUSG00000045031.19	Cetn4	chr3	protein_coding	centrin 4
chr3	37363330	37364086	-	37363631	37364086	3pMXE	0.5	50	50	ENSMUST00000125252.3	ENSMUSG00000045031.19	Cetn4	chr3	protein_coding	centrin 4
chr3	37366734	37373199	+	37366734	37458761	A3SS	0.33	50	50	ENSMUST00000138710.3	ENSMUSG00000106407.2	Gm43439	chr3	lncRNA	predicted gene 43439
chr3	37366734	37373285	+	37366734	37458761	A3SS	0.33	50	50	ENSMUST00000138710.3	ENSMUSG00000106407.2	Gm43439	chr3	lncRNA	predicted gene 43439
chr3	37450437	37458761	+	37366734	37458761	A5SS	0.5	50	50	ENSMUST00000138710.3	ENSMUSG00000106407.2	Gm43439	chr3	lncRNA	predicted gene 43439
chr3	37366734	37373285	+	37366734	37373199	A3SS	0.33	50	50	ENSMUST00000057975.8	ENSMUSG00000051444.10	Bbs12	chr3	protein_coding	Bardet-Biedl syndrome 12 (human)
chr3	37450437	37458764	+	37450437	37458761	A3SS	0.5	50	50	ENSMUST00000138563.9	ENSMUSG00000037225.14	Fgf2	chr3	protein_coding	fibroblast growth factor 2
chr3	37421228	37450334	+	37403173	37450334	A5SS	0.2	50	50	ENSMUST00000138563.9	ENSMUSG00000037225.14	Fgf2	chr3	protein_coding	fibroblast growth factor 2
chr3	37435002	37450334	+	37403173	37450334	A5SS	0.2	50	50	ENSMUST00000138563.9	ENSMUSG00000037225.14	Fgf2	chr3	protein_coding	fibroblast growth factor 2
chr3	37435139	37450334	+	37403173	37450334	A5SS	0.2	50	50	ENSMUST00000138563.9	ENSMUSG00000037225.14	Fgf2	chr3	protein_coding	fibroblast growth factor 2
chr3	37435148	37450334	+	37403173	37450334	A5SS	0.2	50	50	ENSMUST00000138563.9	ENSMUSG00000037225.14	Fgf2	chr3	protein_coding	fibroblast growth factor 2
chr3	37435002	37450334	+	37421228	37450334	A5SS	0.2	50	50	ENSMUST00000150021.8	ENSMUSG00000037225.14	Fgf2	chr3	protein_coding	fibroblast growth factor 2
chr3	37435139	37450334	+	37421228	37450334	A5SS	0.2	50	50	ENSMUST00000150021.8	ENSMUSG00000037225.14	Fgf2	chr3	protein_coding	fibroblast growth factor 2
chr3	37435148	37450334	+	37421228	37450334	A5SS	0.2	50	50	ENSMUST00000150021.8	ENSMUSG00000037225.14	Fgf2	chr3	protein_coding	fibroblast growth factor 2
chr3	37435139	37450334	+	37435002	37450334	A5SS	0.2	50	50	ENSMUST00000145228.2	ENSMUSG00000037225.14	Fgf2	chr3	protein_coding	fibroblast growth factor 2
chr3	37435148	37450334	+	37435002	37450334	A5SS	0.2	50	50	ENSMUST00000145228.2	ENSMUSG00000037225.14	Fgf2	chr3	protein_coding	fibroblast growth factor 2
chr3	37435148	37450334	+	37435139	37450334	A5SS	0.2	50	50	ENSMUST00000108120.8	ENSMUSG00000037225.14	Fgf2	chr3	protein_coding	fibroblast growth factor 2
chr3	37463711	37473491	-	37463711;37466564	37466509;37473491	ES	0.33	50	50	ENSMUST00000108118.9	ENSMUSG00000050174.16	Nudt6	chr3	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 6
chr3	37459643;37471053	37470850;37473491	-	37459643;37466564	37463657;37473491	MXE	0.5	100	100	ENSMUST00000108118.9	ENSMUSG00000050174.16	Nudt6	chr3	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 6
chr3	37466564;37471053	37470850;37473491	-	37466564	37473491	cassetteExon	0.5	100	100	ENSMUST00000108118.9	ENSMUSG00000050174.16	Nudt6	chr3	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 6
chr3	37459640	37463657	-	37459643	37463657	A3SS	0.5	50	50	ENSMUST00000108118.9	ENSMUSG00000050174.16	Nudt6	chr3	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 6
chr3	37463711	37464734	-	37463711	37466509	A5SS	0.33	50	50	ENSMUST00000108118.9	ENSMUSG00000050174.16	Nudt6	chr3	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 6
chr3	37466564	37469800	-	37466564	37473491	A5SS	0.33	50	50	ENSMUST00000108118.9	ENSMUSG00000050174.16	Nudt6	chr3	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 6
chr3	37459643;37471053	37470850;37473491	-	37459643;37463711	37463657;37473491	MXE	0.5	100	100	ENSMUST00000108117.3	ENSMUSG00000050174.16	Nudt6	chr3	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 6
chr3	37463711	37464734	-	37463711	37473491	A5SS	0.33	50	50	ENSMUST00000108117.3	ENSMUSG00000050174.16	Nudt6	chr3	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 6
chr3	37471053	37473972	-	37471053	37473491	5pMXE	0.33	50	50	ENSMUST00000052645.13	ENSMUSG00000050174.16	Nudt6	chr3	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 6
chr3	37466564;37469841	37469800;37470850	-	37466564	37470850	cassetteExon	0.5	100	100	ENSMUST00000052645.13	ENSMUSG00000050174.16	Nudt6	chr3	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 6
chr3	37471053	37473587	-	37471053	37473491	A5SS	0.33	50	50	ENSMUST00000052645.13	ENSMUSG00000050174.16	Nudt6	chr3	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 6
chr3	37459640	37473972	-	37471053	37473972	A3SS&ES	0.5	50	50	ENSMUST00000146324.8	ENSMUSG00000050174.16	Nudt6	chr3	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 6
chr3	37463711	37473491	-	37463711	37466509	A5SS&ES	0.33	50	50	ENSMUST00000146324.8	ENSMUSG00000050174.16	Nudt6	chr3	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 6
chr3	37466564	37473491	-	37466564	37470850	A5SS&ES	0.33	50	50	ENSMUST00000146324.8	ENSMUSG00000050174.16	Nudt6	chr3	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 6
chr3	37471053	37473587	-	37471053	37473972	A5SS	0.33	50	50	ENSMUST00000146324.8	ENSMUSG00000050174.16	Nudt6	chr3	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 6
chr3	37459640	37463657	-	37459640	37473972	A5SS	0.5	50	50	ENSMUST00000141438.2	ENSMUSG00000050174.16	Nudt6	chr3	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 6
chr3	37459643	37470850	-	37466564	37470850	A3SS&ES	0.33	50	50	ENSMUST00000099130.9	ENSMUSG00000050174.16	Nudt6	chr3	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 6
chr3	37466564	37473491	-	37471053	37473491	A3SS&ES	0.33	50	50	ENSMUST00000149449.8	ENSMUSG00000050174.16	Nudt6	chr3	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 6
chr3	37469841	37470850	-	37459643	37470850	A3SS	0.33	50	50	ENSMUST00000149449.8	ENSMUSG00000050174.16	Nudt6	chr3	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 6
chr3	37582471;37584168	37584132;37632901	+	37582471	37632901	cassetteExon	0.5	100	100	ENSMUST00000108112.10	ENSMUSG00000027722.15	Spata5	chr3	protein_coding	spermatogenesis associated 5
chr3	37474649	37478663	+	37474649	37478660	A3SS	0.5	50	50	ENSMUST00000108112.10	ENSMUSG00000027722.15	Spata5	chr3	protein_coding	spermatogenesis associated 5
chr3	37478784	37479389	+	37478784	37480238	A3SS	0.5	50	50	ENSMUST00000108112.10	ENSMUSG00000027722.15	Spata5	chr3	protein_coding	spermatogenesis associated 5
chr3	37475192	37478660	+	37474649	37478660	A5SS	0.5	50	50	ENSMUST00000108112.10	ENSMUSG00000027722.15	Spata5	chr3	protein_coding	spermatogenesis associated 5
chr3	37487432	37487788	+	37487416	37487788	A5SS	0.5	50	50	ENSMUST00000108112.10	ENSMUSG00000027722.15	Spata5	chr3	protein_coding	spermatogenesis associated 5
chr3	37547395	37582307	+	37518807	37582307	A5SS	0.5	50	50	ENSMUST00000108112.10	ENSMUSG00000027722.15	Spata5	chr3	protein_coding	spermatogenesis associated 5
chr3	37627806	37632901	+	37582471	37632901	A5SS	0.33	50	50	ENSMUST00000108112.10	ENSMUSG00000027722.15	Spata5	chr3	protein_coding	spermatogenesis associated 5
chr3	37627806	37632901	+	37584168	37632901	A5SS	0.33	50	50	ENSMUST00000198968.2	ENSMUSG00000027722.15	Spata5	chr3	protein_coding	spermatogenesis associated 5
chr3	37668382	37668524	+	37668382	37668931	A3SS	0.5	50	50	ENSMUST00000144981.8	ENSMUSG00000085677.8	4930594O21Rik	chr3	lncRNA	RIKEN cDNA 4930594O21 gene
chr3	37694254	37694669	+	37694213	37694669	A5SS	0.5	50	50	ENSMUST00000108109.8	ENSMUSG00000037211.13	Spry1	chr3	protein_coding	sprouty RTK signaling antagonist 1
chr3	37769284	37778352	-	37769284;37770381	37770271;37778352	ES	0.25	50	50	ENSMUST00000079755.5	ENSMUSG00000058174.8	Gm5148	chr3	protein_coding	predicted gene 5148
chr3	37770487	37778352	-	37770381	37778352	A3SS	0.25	50	50	ENSMUST00000079755.5	ENSMUSG00000058174.8	Gm5148	chr3	protein_coding	predicted gene 5148
chr3	37777130	37778352	-	37770381	37778352	A3SS	0.25	50	50	ENSMUST00000079755.5	ENSMUSG00000058174.8	Gm5148	chr3	protein_coding	predicted gene 5148
chr3	37769284	37778352	-	37769284;37770487	37770271;37778352	ES	0.25	50	50	ENSMUST00000108105.2	ENSMUSG00000058174.8	Gm5148	chr3	protein_coding	predicted gene 5148
chr3	37777130	37778352	-	37770487	37778352	A3SS	0.25	50	50	ENSMUST00000108105.2	ENSMUSG00000058174.8	Gm5148	chr3	protein_coding	predicted gene 5148
chr3	37777130	37778352	-	37769284	37778352	A3SS	0.25	50	50	ENSMUST00000099128.2	ENSMUSG00000058174.8	Gm5148	chr3	protein_coding	predicted gene 5148
chr3	38482232	38497576	-	38482232;38487605	38487552;38497576	ES	0.5	50	50	ENSMUST00000199408.5	ENSMUSG00000105516.5	Gm36823	chr3	lncRNA	predicted gene, 36823
chr3	38483626	38487552	-	38482232	38487552	A3SS	0.5	50	50	ENSMUST00000199408.5	ENSMUSG00000105516.5	Gm36823	chr3	lncRNA	predicted gene, 36823
chr3	38511734	38517049	-	38506654	38517049	A3SS	0.5	50	50	ENSMUST00000120875.8	ENSMUSG00000044864.17	Ankrd50	chr3	protein_coding	ankyrin repeat domain 50
chr3	38537716	38538820	-	38538133	38538820	A3SS	0.5	50	50	ENSMUST00000120875.8	ENSMUSG00000044864.17	Ankrd50	chr3	protein_coding	ankyrin repeat domain 50
chr3	38506654	38508190	-	38506654	38517049	A5SS	0.5	50	50	ENSMUST00000120875.8	ENSMUSG00000044864.17	Ankrd50	chr3	protein_coding	ankyrin repeat domain 50
chr3	38506654	38517049	-	38506654;38511734	38508190;38517049	ES	0.5	50	50	ENSMUST00000156038.2	ENSMUSG00000044864.17	Ankrd50	chr3	protein_coding	ankyrin repeat domain 50
chr3	40562825	40563457	-	40562825	40567151	A5SS	0.5	50	50	ENSMUST00000035860.7	ENSMUSG00000037884.7	1700017G19Rik	chr3	lncRNA	RIKEN cDNA 1700017G19 gene
chr3	40595158	40608136	+	40586112	40608136	A5SS	0.5	50	50	ENSMUST00000061590.6	ENSMUSG00000060798.8	Intu	chr3	protein_coding	inturned planar cell polarity protein
chr3	40645188	40646929	+	40645188;40646366	40646145;40646929	ES	0.5	50	50	ENSMUST00000091186.7	ENSMUSG00000060798.8	Intu	chr3	protein_coding	inturned planar cell polarity protein
chr3	40705164	40711433	+	40705164;40707722	40707582;40711433	ES	0.5	50	50	ENSMUST00000203353.3	ENSMUSG00000025757.14	Hspa4l	chr3	protein_coding	heat shock protein 4 like
chr3	40700438	40705107	+	40700216	40705107	A5SS	0.5	50	50	ENSMUST00000203353.3	ENSMUSG00000025757.14	Hspa4l	chr3	protein_coding	heat shock protein 4 like
chr3	40756507	40759447	+	40756507	40759443	A3SS	0.5	50	50	ENSMUST00000026858.11	ENSMUSG00000025758.11	Plk4	chr3	protein_coding	polo like kinase 4
chr3	40761022	40763191	+	40761022	40763182	A3SS	0.5	50	50	ENSMUST00000026858.11	ENSMUSG00000025758.11	Plk4	chr3	protein_coding	polo like kinase 4
chr3	40755306	40755435	+	40754718	40755435	A5SS	0.5	50	50	ENSMUST00000026858.11	ENSMUSG00000025758.11	Plk4	chr3	protein_coding	polo like kinase 4
chr3	40764735	40765097	+	40764816	40765097	A5SS	0.5	50	50	ENSMUST00000026858.11	ENSMUSG00000025758.11	Plk4	chr3	protein_coding	polo like kinase 4
chr3	40791567	40801076	-	40791567;40793940	40793849;40801076	ES	0.33	50	50	ENSMUST00000026859.11	ENSMUSG00000025759.12	Mfsd8	chr3	protein_coding	major facilitator superfamily domain containing 8
chr3	40776532	40778262	-	40776733	40778262	A3SS&ES	0.5	50	50	ENSMUST00000026859.11	ENSMUSG00000025759.12	Mfsd8	chr3	protein_coding	major facilitator superfamily domain containing 8
chr3	40789740	40791524	-	40789844	40791524	A3SS	0.5	50	50	ENSMUST00000026859.11	ENSMUSG00000025759.12	Mfsd8	chr3	protein_coding	major facilitator superfamily domain containing 8
chr3	40781417	40782405	-	40781417	40785059	A5SS	0.5	50	50	ENSMUST00000026859.11	ENSMUSG00000025759.12	Mfsd8	chr3	protein_coding	major facilitator superfamily domain containing 8
chr3	40793940	40800803	-	40793940	40801076	A5SS	0.5	50	50	ENSMUST00000026859.11	ENSMUSG00000025759.12	Mfsd8	chr3	protein_coding	major facilitator superfamily domain containing 8
chr3	40789844;40791567	40791524;40801076	-	40789844	40801076	cassetteExon	0.5	100	100	ENSMUST00000204054.2	ENSMUSG00000025759.12	Mfsd8	chr3	protein_coding	major facilitator superfamily domain containing 8
chr3	40793940	40801076	-	40789844	40801076	A3SS	0.33	50	50	ENSMUST00000204054.2	ENSMUSG00000025759.12	Mfsd8	chr3	protein_coding	major facilitator superfamily domain containing 8
chr3	40789844	40801076	-	40791567	40801076	3pMXE	0.33	50	50	ENSMUST00000204017.2	ENSMUSG00000025759.12	Mfsd8	chr3	protein_coding	major facilitator superfamily domain containing 8
chr3	40817195	40821864	+	40812391	40821864	A5SS	0.5	50	50	ENSMUST00000203919.3	ENSMUSG00000107741.3	Gm2011	chr3	transcribed_unprocessed_pseudogene	predicted gene 2011
chr3	40860391	40871121	+	40860391;40865038	40864938;40871121	ES	0.5	50	50	ENSMUST00000108078.9	ENSMUSG00000037818.17	Abhd18	chr3	protein_coding	abhydrolase domain containing 18
chr3	40860391;40860653	40860602;40864938	+	40860391	40864938	cassetteExon	0.5	100	100	ENSMUST00000108078.9	ENSMUSG00000037818.17	Abhd18	chr3	protein_coding	abhydrolase domain containing 18
chr3	40801571	40812291	+	40801571	40859321	A3SS	0.5	50	50	ENSMUST00000108078.9	ENSMUSG00000037818.17	Abhd18	chr3	protein_coding	abhydrolase domain containing 18
chr3	40848878	40859321	+	40801571	40859321	A5SS	0.5	50	50	ENSMUST00000108078.9	ENSMUSG00000037818.17	Abhd18	chr3	protein_coding	abhydrolase domain containing 18
chr3	40848878	40864938	+	40860391	40864938	A5SS&ES	0.33	50	50	ENSMUST00000108078.9	ENSMUSG00000037818.17	Abhd18	chr3	protein_coding	abhydrolase domain containing 18
chr3	40885061	40885316	+	40884661	40885316	A5SS	0.33	50	50	ENSMUST00000108078.9	ENSMUSG00000037818.17	Abhd18	chr3	protein_coding	abhydrolase domain containing 18
chr3	40848878	40859321	+	40848878	40864938	A3SS	0.5	50	50	ENSMUST00000203472.3	ENSMUSG00000037818.17	Abhd18	chr3	protein_coding	abhydrolase domain containing 18
chr3	40860391	40871121	+	40865038	40871121	A5SS&ES	0.5	50	50	ENSMUST00000203472.3	ENSMUSG00000037818.17	Abhd18	chr3	protein_coding	abhydrolase domain containing 18
chr3	40860653	40864938	+	40848878	40864938	A5SS	0.33	50	50	ENSMUST00000203472.3	ENSMUSG00000037818.17	Abhd18	chr3	protein_coding	abhydrolase domain containing 18
chr3	40873840	40877848	+	40873840	40885316	A3SS	0.5	50	50	ENSMUST00000204496.3	ENSMUSG00000037818.17	Abhd18	chr3	protein_coding	abhydrolase domain containing 18
chr3	40884661	40885316	+	40873840	40885316	A5SS	0.33	50	50	ENSMUST00000204496.3	ENSMUSG00000037818.17	Abhd18	chr3	protein_coding	abhydrolase domain containing 18
chr3	40885061	40885316	+	40873840	40885316	A5SS	0.33	50	50	ENSMUST00000204496.3	ENSMUSG00000037818.17	Abhd18	chr3	protein_coding	abhydrolase domain containing 18
chr3	40848878;40865038	40864938;40871121	+	40848878;40860391	40859321;40871121	MXE	0.5	100	100	ENSMUST00000203214.3	ENSMUSG00000037818.17	Abhd18	chr3	protein_coding	abhydrolase domain containing 18
chr3	40860391	40860602	+	40860391	40871121	A3SS	0.33	50	50	ENSMUST00000203214.3	ENSMUSG00000037818.17	Abhd18	chr3	protein_coding	abhydrolase domain containing 18
chr3	40916101	40918403	+	40916101;40916663	40916604;40918403	ES	0.5	50	50	ENSMUST00000048490.13	ENSMUSG00000025762.17	Larp1b	chr3	protein_coding	La ribonucleoprotein domain family, member 1B
chr3	40918577	40924326	+	40918577;40921940	40921800;40924326	ES	0.5	50	50	ENSMUST00000048490.13	ENSMUSG00000025762.17	Larp1b	chr3	protein_coding	La ribonucleoprotein domain family, member 1B
chr3	40905385	40916043	+	40905119	40916043	A5SS	0.5	50	50	ENSMUST00000048490.13	ENSMUSG00000025762.17	Larp1b	chr3	protein_coding	La ribonucleoprotein domain family, member 1B
chr3	40916223	40916604	+	40916101	40916604	A5SS	0.5	50	50	ENSMUST00000048490.13	ENSMUSG00000025762.17	Larp1b	chr3	protein_coding	La ribonucleoprotein domain family, member 1B
chr3	40926201	40926796	+	40925051	40926796	A5SS	0.5	50	50	ENSMUST00000048490.13	ENSMUSG00000025762.17	Larp1b	chr3	protein_coding	La ribonucleoprotein domain family, member 1B
chr3	40988524	40991125	+	40988524;40990310	40990201;40991125	ES	0.5	50	50	ENSMUST00000191882.6	ENSMUSG00000025762.17	Larp1b	chr3	protein_coding	La ribonucleoprotein domain family, member 1B
chr3	40991252	40992975	+	40991252	40993365	A3SS	0.5	50	50	ENSMUST00000191882.6	ENSMUSG00000025762.17	Larp1b	chr3	protein_coding	La ribonucleoprotein domain family, member 1B
chr3	40978455	40978880	+	40965616	40978880	A5SS	0.5	50	50	ENSMUST00000191882.6	ENSMUSG00000025762.17	Larp1b	chr3	protein_coding	La ribonucleoprotein domain family, member 1B
chr3	40978986	40987821	+	40978986	40990201	A3SS	0.5	50	50	ENSMUST00000065411.13	ENSMUSG00000025762.17	Larp1b	chr3	protein_coding	La ribonucleoprotein domain family, member 1B
chr3	40988524	40990201	+	40978986	40990201	A5SS	0.5	50	50	ENSMUST00000065411.13	ENSMUSG00000025762.17	Larp1b	chr3	protein_coding	La ribonucleoprotein domain family, member 1B
chr3	40988524	40991125	+	40990310	40991125	A5SS&ES	0.5	50	50	ENSMUST00000065411.13	ENSMUSG00000025762.17	Larp1b	chr3	protein_coding	La ribonucleoprotein domain family, member 1B
chr3	41322181	41342431	+	41322181	41323343	3pMXE	0.5	50	50	ENSMUST00000196973.2	ENSMUSG00000105297.2	1700052H01Rik	chr3	lncRNA	RIKEN cDNA 1700052H01 gene
chr3	41444171	41447575	-	41444171	41447523	A5SS	0.5	50	50	ENSMUST00000199155.2	ENSMUSG00000097639.3	Platr4	chr3	lncRNA	pluripotency associated transcript 4
chr3	41476890;41477679	41477365;41482834	-	41476890	41482834	cassetteExon	0.5	100	100	ENSMUST00000198272.2	ENSMUSG00000106223.2	2400006E01Rik	chr3	lncRNA	RIKEN cDNA 2400006E01 gene
chr3	41476890;41477679	41477379;41482834	-	41476890	41482834	cassetteExon	0.5	100	100	ENSMUST00000198272.2	ENSMUSG00000106223.2	2400006E01Rik	chr3	lncRNA	RIKEN cDNA 2400006E01 gene
chr3	41476890	41477379	-	41476890	41477365	A5SS	0.33	50	50	ENSMUST00000199633.2	ENSMUSG00000106223.2	2400006E01Rik	chr3	lncRNA	RIKEN cDNA 2400006E01 gene
chr3	41476890	41482834	-	41476890	41477379	5pMXE	0.33	50	50	ENSMUST00000197509.2	ENSMUSG00000106223.2	2400006E01Rik	chr3	lncRNA	RIKEN cDNA 2400006E01 gene
chr3	41510254;41515028	41514906;41535630	+	41510254	41535630	cassetteExon	0.5	100	100	ENSMUST00000026865.15	ENSMUSG00000025764.15	Jade1	chr3	protein_coding	jade family PHD finger 1
chr3	41543457;41543816	41543758;41546118	+	41543457	41546118	cassetteExon	0.5	100	100	ENSMUST00000026865.15	ENSMUSG00000025764.15	Jade1	chr3	protein_coding	jade family PHD finger 1
chr3	41546275	41548238	+	41546275	41548202	A3SS	0.5	50	50	ENSMUST00000026865.15	ENSMUSG00000025764.15	Jade1	chr3	protein_coding	jade family PHD finger 1
chr3	41518001	41535630	+	41510254	41535630	A5SS	0.16	50	50	ENSMUST00000026865.15	ENSMUSG00000025764.15	Jade1	chr3	protein_coding	jade family PHD finger 1
chr3	41518351	41535630	+	41510254	41535630	A5SS	0.16	50	50	ENSMUST00000026865.15	ENSMUSG00000025764.15	Jade1	chr3	protein_coding	jade family PHD finger 1
chr3	41519438	41535630	+	41510254	41535630	A5SS	0.16	50	50	ENSMUST00000026865.15	ENSMUSG00000025764.15	Jade1	chr3	protein_coding	jade family PHD finger 1
chr3	41519445	41535630	+	41510254	41535630	A5SS	0.16	50	50	ENSMUST00000026865.15	ENSMUSG00000025764.15	Jade1	chr3	protein_coding	jade family PHD finger 1
chr3	41556975	41558905	+	41555918	41558905	A5SS	0.33	50	50	ENSMUST00000026865.15	ENSMUSG00000025764.15	Jade1	chr3	protein_coding	jade family PHD finger 1
chr3	41518001	41535630	+	41515028	41535630	A5SS	0.16	50	50	ENSMUST00000194181.6	ENSMUSG00000025764.15	Jade1	chr3	protein_coding	jade family PHD finger 1
chr3	41518351	41535630	+	41515028	41535630	A5SS	0.16	50	50	ENSMUST00000194181.6	ENSMUSG00000025764.15	Jade1	chr3	protein_coding	jade family PHD finger 1
chr3	41519438	41535630	+	41515028	41535630	A5SS	0.16	50	50	ENSMUST00000194181.6	ENSMUSG00000025764.15	Jade1	chr3	protein_coding	jade family PHD finger 1
chr3	41519445	41535630	+	41515028	41535630	A5SS	0.16	50	50	ENSMUST00000194181.6	ENSMUSG00000025764.15	Jade1	chr3	protein_coding	jade family PHD finger 1
chr3	41518351	41535630	+	41518001	41535630	A5SS	0.16	50	50	ENSMUST00000163764.8	ENSMUSG00000025764.15	Jade1	chr3	protein_coding	jade family PHD finger 1
chr3	41519438	41535630	+	41518001	41535630	A5SS	0.16	50	50	ENSMUST00000163764.8	ENSMUSG00000025764.15	Jade1	chr3	protein_coding	jade family PHD finger 1
chr3	41519445	41535630	+	41518001	41535630	A5SS	0.16	50	50	ENSMUST00000163764.8	ENSMUSG00000025764.15	Jade1	chr3	protein_coding	jade family PHD finger 1
chr3	41519438	41535630	+	41518351	41535630	A5SS	0.16	50	50	ENSMUST00000170711.8	ENSMUSG00000025764.15	Jade1	chr3	protein_coding	jade family PHD finger 1
chr3	41519445	41535630	+	41518351	41535630	A5SS	0.16	50	50	ENSMUST00000170711.8	ENSMUSG00000025764.15	Jade1	chr3	protein_coding	jade family PHD finger 1
chr3	41519445	41535630	+	41519438	41535630	A5SS	0.16	50	50	ENSMUST00000168086.7	ENSMUSG00000025764.15	Jade1	chr3	protein_coding	jade family PHD finger 1
chr3	41551261	41558905	+	41551261	41554457	3pMXE	0.5	50	50	ENSMUST00000195322.6	ENSMUSG00000025764.15	Jade1	chr3	protein_coding	jade family PHD finger 1
chr3	41555918	41558905	+	41551261	41558905	A5SS	0.33	50	50	ENSMUST00000192451.2	ENSMUSG00000025764.15	Jade1	chr3	protein_coding	jade family PHD finger 1
chr3	41556975	41558905	+	41551261	41558905	A5SS	0.33	50	50	ENSMUST00000192451.2	ENSMUSG00000025764.15	Jade1	chr3	protein_coding	jade family PHD finger 1
chr3	41616152;41617923	41617800;41618387	-	41616152	41618387	cassetteExon	0.5	100	100	ENSMUST00000026866.15	ENSMUSG00000059834.13	Sclt1	chr3	protein_coding	sodium channel and clathrin linker 1
chr3	41625937	41629763	-	41625918	41629763	A3SS	0.5	50	50	ENSMUST00000026866.15	ENSMUSG00000059834.13	Sclt1	chr3	protein_coding	sodium channel and clathrin linker 1
chr3	41685349	41688603	-	41685354	41688603	A3SS	0.5	50	50	ENSMUST00000026866.15	ENSMUSG00000059834.13	Sclt1	chr3	protein_coding	sodium channel and clathrin linker 1
chr3	41697124	41700983	+	41697124;41699247	41699131;41700983	ES	0.33	50	50	ENSMUST00000120167.8	ENSMUSG00000025766.15	D3Ertd751e	chr3	protein_coding	DNA segment, Chr 3, ERATO Doi 751, expressed
chr3	41703168	41710484	+	41703168;41708075	41708024;41710484	ES	0.25	50	50	ENSMUST00000120167.8	ENSMUSG00000025766.15	D3Ertd751e	chr3	protein_coding	DNA segment, Chr 3, ERATO Doi 751, expressed
chr3	41703168;41705633	41705530;41708024	+	41703168	41708024	cassetteExon	0.5	100	100	ENSMUST00000120167.8	ENSMUSG00000025766.15	D3Ertd751e	chr3	protein_coding	DNA segment, Chr 3, ERATO Doi 751, expressed
chr3	41708075;41708210	41708159;41710484	+	41708075	41710484	cassetteExon	0.5	100	100	ENSMUST00000120167.8	ENSMUSG00000025766.15	D3Ertd751e	chr3	protein_coding	DNA segment, Chr 3, ERATO Doi 751, expressed
chr3	41708075;41708358	41708159;41710484	+	41708075	41710484	cassetteExon	0.5	100	100	ENSMUST00000120167.8	ENSMUSG00000025766.15	D3Ertd751e	chr3	protein_coding	DNA segment, Chr 3, ERATO Doi 751, expressed
chr3	41697124	41699140	+	41697124	41699131	A3SS	0.33	50	50	ENSMUST00000120167.8	ENSMUSG00000025766.15	D3Ertd751e	chr3	protein_coding	DNA segment, Chr 3, ERATO Doi 751, expressed
chr3	41697201	41699131	+	41697124	41699131	A5SS	0.5	50	50	ENSMUST00000120167.8	ENSMUSG00000025766.15	D3Ertd751e	chr3	protein_coding	DNA segment, Chr 3, ERATO Doi 751, expressed
chr3	41697460	41700983	+	41699247	41700983	A5SS&ES	0.33	50	50	ENSMUST00000120167.8	ENSMUSG00000025766.15	D3Ertd751e	chr3	protein_coding	DNA segment, Chr 3, ERATO Doi 751, expressed
chr3	41697124;41699247	41699140;41700983	+	41697124	41700983	cassetteExon	0.5	100	100	ENSMUST00000108065.9	ENSMUSG00000025766.15	D3Ertd751e	chr3	protein_coding	DNA segment, Chr 3, ERATO Doi 751, expressed
chr3	41703168;41705633	41705530;41708159	+	41703168;41708075	41708024;41708159	MXE	0.5	100	100	ENSMUST00000108065.9	ENSMUSG00000025766.15	D3Ertd751e	chr3	protein_coding	DNA segment, Chr 3, ERATO Doi 751, expressed
chr3	41697460	41700983	+	41697124	41700983	A5SS	0.33	50	50	ENSMUST00000108065.9	ENSMUSG00000025766.15	D3Ertd751e	chr3	protein_coding	DNA segment, Chr 3, ERATO Doi 751, expressed
chr3	41708210	41710484	+	41708358	41710484	A5SS	0.25	50	50	ENSMUST00000108065.9	ENSMUSG00000025766.15	D3Ertd751e	chr3	protein_coding	DNA segment, Chr 3, ERATO Doi 751, expressed
chr3	41705633	41708159	+	41705633;41708075	41708024;41708159	ES	0.5	50	50	ENSMUST00000143841.8	ENSMUSG00000025766.15	D3Ertd751e	chr3	protein_coding	DNA segment, Chr 3, ERATO Doi 751, expressed
chr3	41703168;41708210	41708024;41710484	+	41703168	41710484	cassetteExon	0.5	100	100	ENSMUST00000192193.6	ENSMUSG00000025766.15	D3Ertd751e	chr3	protein_coding	DNA segment, Chr 3, ERATO Doi 751, expressed
chr3	41703168;41708358	41708024;41710484	+	41703168	41710484	cassetteExon	0.5	100	100	ENSMUST00000192193.6	ENSMUSG00000025766.15	D3Ertd751e	chr3	protein_coding	DNA segment, Chr 3, ERATO Doi 751, expressed
chr3	41703168	41705530	+	41703168	41710484	A3SS	0.33	50	50	ENSMUST00000192193.6	ENSMUSG00000025766.15	D3Ertd751e	chr3	protein_coding	DNA segment, Chr 3, ERATO Doi 751, expressed
chr3	41710564	41739936	+	41710564	41713059	3pMXE	0.5	50	50	ENSMUST00000119572.8	ENSMUSG00000025766.15	D3Ertd751e	chr3	protein_coding	DNA segment, Chr 3, ERATO Doi 751, expressed
chr3	41708075	41710484	+	41708075	41708159	3pMXE	0.5	50	50	ENSMUST00000026868.13	ENSMUSG00000025766.15	D3Ertd751e	chr3	protein_coding	DNA segment, Chr 3, ERATO Doi 751, expressed
chr3	41697124	41700983	+	41699247	41700983	5pMXE	0.33	50	50	ENSMUST00000194346.6	ENSMUSG00000025766.15	D3Ertd751e	chr3	protein_coding	DNA segment, Chr 3, ERATO Doi 751, expressed
chr3	41705633;41708075	41708024;41710484	+	41705633;41708210	41708159;41710484	MXE	0.5	100	100	ENSMUST00000195030.2	ENSMUSG00000025766.15	D3Ertd751e	chr3	protein_coding	DNA segment, Chr 3, ERATO Doi 751, expressed
chr3	45236599;45241887	45241767;45281501	-	45236599	45281501	cassetteExon	0.5	100	100	ENSMUST00000181047.7	ENSMUSG00000097040.7	2610316D01Rik	chr3	lncRNA	RIKEN cDNA 2610316D01 gene
chr3	45320783;45332445	45332303;45332577	-	45320783	45332577	cassetteExon	0.5	100	100	ENSMUST00000181047.7	ENSMUSG00000097040.7	2610316D01Rik	chr3	lncRNA	RIKEN cDNA 2610316D01 gene
chr3	45347309	45373842	+	45347309	45353758	3pMXE	0.33	50	50	ENSMUST00000171554.8	ENSMUSG00000049100.16	Pcdh10	chr3	protein_coding	protocadherin 10
chr3	45347309	45386909	+	45347309	45353758	3pMXE	0.33	50	50	ENSMUST00000171554.8	ENSMUSG00000049100.16	Pcdh10	chr3	protein_coding	protocadherin 10
chr3	45337209	45337966	+	45336318	45337966	A5SS	0.5	50	50	ENSMUST00000171554.8	ENSMUSG00000049100.16	Pcdh10	chr3	protein_coding	protocadherin 10
chr3	45347309	45373842	+	45347309	45386909	A3SS	0.33	50	50	ENSMUST00000166126.7	ENSMUSG00000049100.16	Pcdh10	chr3	protein_coding	protocadherin 10
chr3	46401724	46402496	-	46401724	46402252	5pMXE	0.33	50	50	ENSMUST00000166505.7	ENSMUSG00000090919.7	Pabpc4l	chr3	protein_coding	poly(A) binding protein, cytoplasmic 4-like
chr3	46401724;46402068	46401940;46402252	-	46401724	46402252	cassetteExon	0.5	100	100	ENSMUST00000166505.7	ENSMUSG00000090919.7	Pabpc4l	chr3	protein_coding	poly(A) binding protein, cytoplasmic 4-like
chr3	46401724	46401940	-	46401724	46402496	A5SS	0.33	50	50	ENSMUST00000192793.6	ENSMUSG00000090919.7	Pabpc4l	chr3	protein_coding	poly(A) binding protein, cytoplasmic 4-like
chr3	49707047	49707733	-	49699723	49707733	A3SS	0.5	50	50	ENSMUST00000035931.13	ENSMUSG00000037892.14	Pcdh18	chr3	protein_coding	protocadherin 18
chr3	49708077	49708827	-	49708074	49708827	A3SS	0.5	50	50	ENSMUST00000035931.13	ENSMUSG00000037892.14	Pcdh18	chr3	protein_coding	protocadherin 18
chr3	49699723	49707725	-	49699723	49707733	A5SS	0.5	50	50	ENSMUST00000035931.13	ENSMUSG00000037892.14	Pcdh18	chr3	protein_coding	protocadherin 18
chr3	49708074	49711484	-	49708074	49708827	A5SS	0.5	50	50	ENSMUST00000035931.13	ENSMUSG00000037892.14	Pcdh18	chr3	protein_coding	protocadherin 18
chr3	49709915	49711484	-	49708074	49711484	A3SS	0.5	50	50	ENSMUST00000193600.2	ENSMUSG00000037892.14	Pcdh18	chr3	protein_coding	protocadherin 18
chr3	50326815	50332013	-	49847596	50332013	A3SS	0.5	50	50	ENSMUST00000194462.6	ENSMUSG00000027737.11	Slc7a11	chr3	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 11
chr3	50534941	50537304	-	50531546	50537304	A3SS	0.5	50	50	ENSMUST00000194629.2	ENSMUSG00000102715.2	Gm6209	chr3	lncRNA	predicted gene 6209
chr3	51151273	51155226	+	51132708	51155226	A5SS	0.5	50	50	ENSMUST00000023849.15	ENSMUSG00000023087.16	Noct	chr3	protein_coding	nocturnin
chr3	51166785	51172290	-	51166785;51168506	51168420;51172290	ES	0.5	50	50	ENSMUST00000194641.6	ENSMUSG00000037174.19	Elf2	chr3	protein_coding	E74-like factor 2
chr3	51174287;51201609	51201514;51215471	-	51174287	51215471	cassetteExon	0.5	100	100	ENSMUST00000194641.6	ENSMUSG00000037174.19	Elf2	chr3	protein_coding	E74-like factor 2
chr3	51174287;51207306	51207204;51215471	-	51174287	51215471	cassetteExon	0.5	100	100	ENSMUST00000194641.6	ENSMUSG00000037174.19	Elf2	chr3	protein_coding	E74-like factor 2
chr3	51172427	51174174	-	51172463	51174174	A3SS	0.25	50	50	ENSMUST00000194641.6	ENSMUSG00000037174.19	Elf2	chr3	protein_coding	E74-like factor 2
chr3	51172494	51174174	-	51172463	51174174	A3SS	0.25	50	50	ENSMUST00000194641.6	ENSMUSG00000037174.19	Elf2	chr3	protein_coding	E74-like factor 2
chr3	51173466	51174174	-	51172463	51174174	A3SS	0.25	50	50	ENSMUST00000194641.6	ENSMUSG00000037174.19	Elf2	chr3	protein_coding	E74-like factor 2
chr3	51174287	51184626	-	51174287	51215471	A5SS	0.25	50	50	ENSMUST00000194641.6	ENSMUSG00000037174.19	Elf2	chr3	protein_coding	E74-like factor 2
chr3	51174287;51207306	51207204;51215471	-	51174287;51201609	51201514;51215471	MXE	0.5	100	100	ENSMUST00000183463.8	ENSMUSG00000037174.19	Elf2	chr3	protein_coding	E74-like factor 2
chr3	51174287	51184626	-	51174287	51201514	A5SS	0.25	50	50	ENSMUST00000183463.8	ENSMUSG00000037174.19	Elf2	chr3	protein_coding	E74-like factor 2
chr3	51172427;51173466	51173234;51174174	-	51172427	51174174	cassetteExon	0.5	100	100	ENSMUST00000062009.14	ENSMUSG00000037174.19	Elf2	chr3	protein_coding	E74-like factor 2
chr3	51172494	51174174	-	51172427	51174174	A3SS	0.25	50	50	ENSMUST00000062009.14	ENSMUSG00000037174.19	Elf2	chr3	protein_coding	E74-like factor 2
chr3	51174287	51207204	-	51174287	51184626	5pMXE	0.25	50	50	ENSMUST00000091144.11	ENSMUSG00000037174.19	Elf2	chr3	protein_coding	E74-like factor 2
chr3	51172494	51174174	-	51173466	51174174	A3SS&ES	0.25	50	50	ENSMUST00000184677.7	ENSMUSG00000037174.19	Elf2	chr3	protein_coding	E74-like factor 2
chr3	51233456	51247835	-	51215636	51247835	A3SS	0.5	50	50	ENSMUST00000194209.2	ENSMUSG00000037174.19	Elf2	chr3	protein_coding	E74-like factor 2
chr3	51215636	51230643	-	51215636	51247835	A5SS	0.5	50	50	ENSMUST00000194209.2	ENSMUSG00000037174.19	Elf2	chr3	protein_coding	E74-like factor 2
chr3	51289136	51293256	+	51286761	51293256	A5SS	0.5	50	50	ENSMUST00000192081.2	ENSMUSG00000102544.2	Gm5103	chr3	lncRNA	predicted gene 5103
chr3	51299349	51303487	-	51299349	51303649	A5SS	0.33	50	50	ENSMUST00000108046.8	ENSMUSG00000037161.15	Mgarp	chr3	protein_coding	mitochondria localized glutamic acid rich protein
chr3	51299349	51303848	-	51299349	51303649	A5SS	0.33	50	50	ENSMUST00000108046.8	ENSMUSG00000037161.15	Mgarp	chr3	protein_coding	mitochondria localized glutamic acid rich protein
chr3	51299349	51303487	-	51299349	51303848	A5SS	0.33	50	50	ENSMUST00000038154.12	ENSMUSG00000037161.15	Mgarp	chr3	protein_coding	mitochondria localized glutamic acid rich protein
chr3	51313035	51314757	-	51313040	51314757	A3SS	0.5	50	50	ENSMUST00000038108.12	ENSMUSG00000037152.12	Ndufc1	chr3	protein_coding	NADH:ubiquinone oxidoreductase subunit C1
chr3	51315669	51315911	-	51315669	51316285	A5SS	0.5	50	50	ENSMUST00000038108.12	ENSMUSG00000037152.12	Ndufc1	chr3	protein_coding	NADH:ubiquinone oxidoreductase subunit C1
chr3	51354187	51355720	+	51354187	51355762	A3SS	0.5	50	50	ENSMUST00000193266.6	ENSMUSG00000063273.12	Naa15	chr3	protein_coding	N(alpha)-acetyltransferase 15, NatA auxiliary subunit
chr3	51324195	51343636	+	51323797	51343636	A5SS	0.5	50	50	ENSMUST00000193266.6	ENSMUSG00000063273.12	Naa15	chr3	protein_coding	N(alpha)-acetyltransferase 15, NatA auxiliary subunit
chr3	51345784	51370685	+	51368698	51370685	A5SS&ES	0.5	50	50	ENSMUST00000193266.6	ENSMUSG00000063273.12	Naa15	chr3	protein_coding	N(alpha)-acetyltransferase 15, NatA auxiliary subunit
chr3	51391533;51392001	51391734;51400777	+	51391533	51400777	cassetteExon	0.5	100	100	ENSMUST00000195715.2	ENSMUSG00000027739.10	Rab33b	chr3	protein_coding	RAB33B, member RAS oncogene family
chr3	51391533	51400777	+	51391533	51391734	3pMXE	0.5	50	50	ENSMUST00000192172.2	ENSMUSG00000027739.10	Rab33b	chr3	protein_coding	RAB33B, member RAS oncogene family
chr3	51391533	51400777	+	51392001	51400777	A5SS	0.5	50	50	ENSMUST00000054387.8	ENSMUSG00000027739.10	Rab33b	chr3	protein_coding	RAB33B, member RAS oncogene family
chr3	51443301	51443887	-	51440477	51443887	A3SS	0.5	50	50	ENSMUST00000037141.9	ENSMUSG00000037111.10	Setd7	chr3	protein_coding	SET domain containing (lysine methyltransferase) 7
chr3	51572031	51589218	+	51572031;51585056	51584986;51589218	ES	0.5	50	50	ENSMUST00000160753.8	ENSMUSG00000074604.10	Mgst2	chr3	protein_coding	microsomal glutathione S-transferase 2
chr3	51585056	51589875	+	51585056	51589218	3pMXE	0.5	50	50	ENSMUST00000160753.8	ENSMUSG00000074604.10	Mgst2	chr3	protein_coding	microsomal glutathione S-transferase 2
chr3	51572031	51584357	+	51572031	51584986	A3SS	0.33	50	50	ENSMUST00000160753.8	ENSMUSG00000074604.10	Mgst2	chr3	protein_coding	microsomal glutathione S-transferase 2
chr3	51568727	51571932	+	51567884	51571932	A5SS	0.5	50	50	ENSMUST00000160753.8	ENSMUSG00000074604.10	Mgst2	chr3	protein_coding	microsomal glutathione S-transferase 2
chr3	51579140	51584986	+	51572031	51584986	A5SS	0.33	50	50	ENSMUST00000160753.8	ENSMUSG00000074604.10	Mgst2	chr3	protein_coding	microsomal glutathione S-transferase 2
chr3	51579467	51584986	+	51572031	51584986	A5SS	0.33	50	50	ENSMUST00000160753.8	ENSMUSG00000074604.10	Mgst2	chr3	protein_coding	microsomal glutathione S-transferase 2
chr3	51572031	51589218	+	51572031	51584357	3pMXE	0.33	50	50	ENSMUST00000161627.2	ENSMUSG00000074604.10	Mgst2	chr3	protein_coding	microsomal glutathione S-transferase 2
chr3	51585056	51589875	+	51585056;51589299	51589218;51589875	ES	0.5	50	50	ENSMUST00000099106.10	ENSMUSG00000074604.10	Mgst2	chr3	protein_coding	microsomal glutathione S-transferase 2
chr3	51572031;51589299	51589218;51589875	+	51572031;51585056	51584986;51589875	MXE	0.5	100	100	ENSMUST00000159554.7	ENSMUSG00000074604.10	Mgst2	chr3	protein_coding	microsomal glutathione S-transferase 2
chr3	51579467	51584986	+	51579140	51584986	A5SS	0.33	50	50	ENSMUST00000159400.8	ENSMUSG00000074604.10	Mgst2	chr3	protein_coding	microsomal glutathione S-transferase 2
chr3	51572031	51589218	+	51585056	51589218	5pMXE	0.5	50	50	ENSMUST00000161230.3	ENSMUSG00000074604.10	Mgst2	chr3	protein_coding	microsomal glutathione S-transferase 2
chr3	51585056	51589875	+	51589299	51589875	5pMXE	0.5	50	50	ENSMUST00000195423.2	ENSMUSG00000074604.10	Mgst2	chr3	protein_coding	microsomal glutathione S-transferase 2
chr3	51605264	51762920	-	51605264	51703820	5pMXE	0.5	50	50	ENSMUST00000118075.7	ENSMUSG00000061143.16	Maml3	chr3	protein_coding	mastermind like transcriptional coactivator 3
chr3	52672262	52678492	+	52647277	52678492	A5SS	0.5	50	50	ENSMUST00000193813.6	ENSMUSG00000102785.6	Gm2447	chr3	lncRNA	predicted gene 2447
chr3	52892381	52893822	-	52890612	52893822	A3SS	0.5	50	50	ENSMUST00000036665.10	ENSMUSG00000027742.14	Cog6	chr3	protein_coding	component of oligomeric golgi complex 6
chr3	52909706	52924467	-	52923033	52924467	A3SS&ES	0.5	50	50	ENSMUST00000036665.10	ENSMUSG00000027742.14	Cog6	chr3	protein_coding	component of oligomeric golgi complex 6
chr3	52950584	53139151	+	52951112	53139151	A5SS	0.5	50	50	ENSMUST00000059562.14	ENSMUSG00000048332.14	Lhfp	chr3	protein_coding	lipoma HMGIC fusion partner
chr3	53366106	53369733	-	53366106;53369200	53369053;53369733	ES	0.5	50	50	ENSMUST00000056749.14	ENSMUSG00000042997.14	Nhlrc3	chr3	protein_coding	NHL repeat containing 3
chr3	53366106	53369733	-	53366106	53369053	5pMXE	0.5	50	50	ENSMUST00000129497.2	ENSMUSG00000042997.14	Nhlrc3	chr3	protein_coding	NHL repeat containing 3
chr3	53429800	53429893	-	53429800	53431084	A5SS	0.5	50	50	ENSMUST00000091137.6	ENSMUSG00000037016.12	Frem2	chr3	protein_coding	Fras1 related extracellular matrix protein 2
chr3	53448522	53451625	-	53448522	53451696	A5SS	0.5	50	50	ENSMUST00000091137.6	ENSMUSG00000037016.12	Frem2	chr3	protein_coding	Fras1 related extracellular matrix protein 2
chr3	53766695	53767620	-	53766695	53767655	A5SS	0.5	50	50	ENSMUST00000146598.8	ENSMUSG00000027746.14	Ufm1	chr3	protein_coding	ubiquitin-fold modifier 1
chr3	54063680	54102074	+	54063680	54084109	3pMXE	0.5	50	50	ENSMUST00000198444.2	ENSMUSG00000027748.12	Trpc4	chr3	protein_coding	transient receptor potential cation channel, subfamily C, member 4
chr3	54064130	54102074	+	54063680	54102074	A5SS	0.5	50	50	ENSMUST00000029311.11	ENSMUSG00000027748.12	Trpc4	chr3	protein_coding	transient receptor potential cation channel, subfamily C, member 4
chr3	54173788	54187284	+	54173841	54187284	A5SS	0.5	50	50	ENSMUST00000029311.11	ENSMUSG00000027748.12	Trpc4	chr3	protein_coding	transient receptor potential cation channel, subfamily C, member 4
chr3	54291994	54296760	+	54291994;54292706	54292629;54296760	ES	0.33	50	50	ENSMUST00000117373.8	ENSMUSG00000027750.17	Postn	chr3	protein_coding	periostin, osteoblast specific factor
chr3	54285027;54287913	54287833;54290809	+	54285027	54290809	cassetteExon	0.5	100	100	ENSMUST00000117373.8	ENSMUSG00000027750.17	Postn	chr3	protein_coding	periostin, osteoblast specific factor
chr3	54292706;54293175	54293092;54296760	+	54292706	54296760	cassetteExon	0.5	100	100	ENSMUST00000117373.8	ENSMUSG00000027750.17	Postn	chr3	protein_coding	periostin, osteoblast specific factor
chr3	54293175	54296760	+	54291994	54296760	A5SS	0.33	50	50	ENSMUST00000143258.2	ENSMUSG00000027750.17	Postn	chr3	protein_coding	periostin, osteoblast specific factor
chr3	54627882	54633391	+	54627882;54630061	54629942;54633391	ES	0.5	50	50	ENSMUST00000197502.5	ENSMUSG00000027751.14	Supt20	chr3	protein_coding	SPT20 SAGA complex component
chr3	54606080	54608908	+	54606080	54608911	A3SS	0.5	50	50	ENSMUST00000197502.5	ENSMUSG00000027751.14	Supt20	chr3	protein_coding	SPT20 SAGA complex component
chr3	54622217	54622578	+	54622217	54622575	A3SS	0.5	50	50	ENSMUST00000197502.5	ENSMUSG00000027751.14	Supt20	chr3	protein_coding	SPT20 SAGA complex component
chr3	54623110	54624059	+	54623110	54624997	A3SS	0.5	50	50	ENSMUST00000197502.5	ENSMUSG00000027751.14	Supt20	chr3	protein_coding	SPT20 SAGA complex component
chr3	54627882	54629978	+	54627882	54629942	A3SS	0.33	50	50	ENSMUST00000197502.5	ENSMUSG00000027751.14	Supt20	chr3	protein_coding	SPT20 SAGA complex component
chr3	54600302	54600524	+	54600280	54600524	A5SS	0.33	50	50	ENSMUST00000197502.5	ENSMUSG00000027751.14	Supt20	chr3	protein_coding	SPT20 SAGA complex component
chr3	54600315	54600524	+	54600280	54600524	A5SS	0.33	50	50	ENSMUST00000197502.5	ENSMUSG00000027751.14	Supt20	chr3	protein_coding	SPT20 SAGA complex component
chr3	54600547	54602544	+	54600629	54602544	A5SS	0.5	50	50	ENSMUST00000197502.5	ENSMUSG00000027751.14	Supt20	chr3	protein_coding	SPT20 SAGA complex component
chr3	54602553	54624059	+	54602559	54624059	A5SS	0.33	50	50	ENSMUST00000200441.5	ENSMUSG00000027751.14	Supt20	chr3	protein_coding	SPT20 SAGA complex component
chr3	54623110	54624059	+	54602559	54624059	A5SS	0.33	50	50	ENSMUST00000200441.5	ENSMUSG00000027751.14	Supt20	chr3	protein_coding	SPT20 SAGA complex component
chr3	54627882	54633391	+	54627882;54630061	54629978;54633391	ES	0.5	50	50	ENSMUST00000029315.13	ENSMUSG00000027751.14	Supt20	chr3	protein_coding	SPT20 SAGA complex component
chr3	54623110	54624059	+	54602553	54624059	A5SS	0.33	50	50	ENSMUST00000029315.13	ENSMUSG00000027751.14	Supt20	chr3	protein_coding	SPT20 SAGA complex component
chr3	54600315	54600524	+	54600302	54600524	A5SS	0.33	50	50	ENSMUST00000199674.5	ENSMUSG00000027751.14	Supt20	chr3	protein_coding	SPT20 SAGA complex component
chr3	54638592	54639533	-	54638592;54639447	54639402;54639533	ES	0.5	50	50	ENSMUST00000029316.16	ENSMUSG00000027752.16	Exosc8	chr3	protein_coding	exosome component 8
chr3	54639650	54640121	-	54639638	54640121	A3SS	0.5	50	50	ENSMUST00000029316.16	ENSMUSG00000027752.16	Exosc8	chr3	protein_coding	exosome component 8
chr3	54638592	54639533	-	54639447	54639533	3pMXE	0.5	50	50	ENSMUST00000153224.2	ENSMUSG00000027752.16	Exosc8	chr3	protein_coding	exosome component 8
chr3	54646372	54646683	+	54646374	54646683	A5SS	0.5	50	50	ENSMUST00000044567.4	ENSMUSG00000036632.10	Alg5	chr3	protein_coding	asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase)
chr3	54712888;54713259	54713173;54714620	-	54712888	54714620	cassetteExon	0.5	100	100	ENSMUST00000044373.6	ENSMUSG00000036615.8	Rfxap	chr3	protein_coding	regulatory factor X-associated protein
chr3	54712888	54714620	-	54712888	54713173	5pMXE	0.5	50	50	ENSMUST00000182246.2	ENSMUSG00000036615.8	Rfxap	chr3	protein_coding	regulatory factor X-associated protein
chr3	54712888	54714620	-	54713259	54714620	3pMXE	0.5	50	50	ENSMUST00000182084.2	ENSMUSG00000036615.8	Rfxap	chr3	protein_coding	regulatory factor X-associated protein
chr3	54807258	54822528	-	54807258	54822324	5pMXE	0.5	50	50	ENSMUST00000162201.3	ENSMUSG00000056306.7	Sertm1	chr3	protein_coding	serine rich and transmembrane domain containing 1
chr3	54953129;54953521	54953388;54954630	-	54953129	54954630	cassetteExon	0.5	100	100	ENSMUST00000198102.5	ENSMUSG00000027793.7	Ccna1	chr3	protein_coding	cyclin A1
chr3	54961939	54962673	-	54961939	54962386	5pMXE	0.33	50	50	ENSMUST00000029368.7	ENSMUSG00000027793.7	Ccna1	chr3	protein_coding	cyclin A1
chr3	54961939	54962370	-	54961939	54962386	A5SS	0.33	50	50	ENSMUST00000029368.7	ENSMUSG00000027793.7	Ccna1	chr3	protein_coding	cyclin A1
chr3	54961942	54962673	-	54961942	54962370	5pMXE	0.5	50	50	ENSMUST00000198320.5	ENSMUSG00000027793.7	Ccna1	chr3	protein_coding	cyclin A1
chr3	54961939	54962370	-	54961942	54962370	A3SS	0.5	50	50	ENSMUST00000198320.5	ENSMUSG00000027793.7	Ccna1	chr3	protein_coding	cyclin A1
chr3	54961939	54962673	-	54961942	54962673	A3SS	0.5	50	50	ENSMUST00000197238.5	ENSMUSG00000027793.7	Ccna1	chr3	protein_coding	cyclin A1
chr3	54961939	54962370	-	54961939	54962673	A5SS	0.33	50	50	ENSMUST00000199144.5	ENSMUSG00000027793.7	Ccna1	chr3	protein_coding	cyclin A1
chr3	55029218	55033955	+	55029218;55032346	55032176;55033955	ES	0.5	50	50	ENSMUST00000044116.14	ENSMUSG00000036580.16	Spg20	chr3	protein_coding	spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)
chr3	55019912	55024405	+	55019638	55024405	A5SS	0.25	50	50	ENSMUST00000044116.14	ENSMUSG00000036580.16	Spg20	chr3	protein_coding	spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)
chr3	55020106	55024405	+	55019638	55024405	A5SS	0.25	50	50	ENSMUST00000044116.14	ENSMUSG00000036580.16	Spg20	chr3	protein_coding	spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)
chr3	55023720	55024405	+	55019638	55024405	A5SS	0.25	50	50	ENSMUST00000044116.14	ENSMUSG00000036580.16	Spg20	chr3	protein_coding	spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)
chr3	55020106	55024405	+	55019912	55024405	A5SS	0.25	50	50	ENSMUST00000118118.8	ENSMUSG00000036580.16	Spg20	chr3	protein_coding	spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)
chr3	55023720	55024405	+	55019912	55024405	A5SS	0.25	50	50	ENSMUST00000118118.8	ENSMUSG00000036580.16	Spg20	chr3	protein_coding	spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)
chr3	55023720	55024405	+	55020106	55024405	A5SS	0.25	50	50	ENSMUST00000149767.2	ENSMUSG00000036580.16	Spg20	chr3	protein_coding	spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)
chr3	55049741;55057646	55057613;55058133	+	55049741	55058133	cassetteExon	0.5	100	100	ENSMUST00000052904.11	ENSMUSG00000048655.18	Ccdc169	chr3	protein_coding	coiled-coil domain containing 169
chr3	55066019;55070277	55070241;55070742	+	55066019	55070742	cassetteExon	0.5	100	100	ENSMUST00000052904.11	ENSMUSG00000048655.18	Ccdc169	chr3	protein_coding	coiled-coil domain containing 169
chr3	55070818	55077781	+	55070818	55078686	A3SS	0.5	50	50	ENSMUST00000052904.11	ENSMUSG00000048655.18	Ccdc169	chr3	protein_coding	coiled-coil domain containing 169
chr3	55047593	55049662	+	55045515	55049662	A5SS	0.33	50	50	ENSMUST00000052904.11	ENSMUSG00000048655.18	Ccdc169	chr3	protein_coding	coiled-coil domain containing 169
chr3	55047689	55049662	+	55045515	55049662	A5SS	0.33	50	50	ENSMUST00000052904.11	ENSMUSG00000048655.18	Ccdc169	chr3	protein_coding	coiled-coil domain containing 169
chr3	55047689	55049662	+	55047593	55049662	A5SS	0.33	50	50	ENSMUST00000118963.9	ENSMUSG00000048655.18	Ccdc169	chr3	protein_coding	coiled-coil domain containing 169
chr3	55424407;55429344	55429271;55440991	+	55424407	55440991	cassetteExon	0.5	100	100	ENSMUST00000196745.5	ENSMUSG00000027797.16	Dclk1	chr3	protein_coding	doublecortin-like kinase 1
chr3	55370516	55373994	+	55370516	55385226	A3SS	0.33	50	50	ENSMUST00000196745.5	ENSMUSG00000027797.16	Dclk1	chr3	protein_coding	doublecortin-like kinase 1
chr3	55370516	55384334	+	55370516	55385226	A3SS	0.33	50	50	ENSMUST00000196745.5	ENSMUSG00000027797.16	Dclk1	chr3	protein_coding	doublecortin-like kinase 1
chr3	55385310	55387758	+	55385310	55387755	A3SS	0.5	50	50	ENSMUST00000196745.5	ENSMUSG00000027797.16	Dclk1	chr3	protein_coding	doublecortin-like kinase 1
chr3	55409871	55410230	+	55409871	55410233	A3SS	0.5	50	50	ENSMUST00000196745.5	ENSMUSG00000027797.16	Dclk1	chr3	protein_coding	doublecortin-like kinase 1
chr3	55261684	55288202	+	55163632	55288202	A5SS	0.5	50	50	ENSMUST00000196745.5	ENSMUSG00000027797.16	Dclk1	chr3	protein_coding	doublecortin-like kinase 1
chr3	55369503	55370422	+	55358504	55370422	A5SS	0.5	50	50	ENSMUST00000196745.5	ENSMUSG00000027797.16	Dclk1	chr3	protein_coding	doublecortin-like kinase 1
chr3	55385358	55387755	+	55385310	55387755	A5SS	0.5	50	50	ENSMUST00000196745.5	ENSMUSG00000027797.16	Dclk1	chr3	protein_coding	doublecortin-like kinase 1
chr3	55435462	55440991	+	55424407	55440991	A5SS	0.33	50	50	ENSMUST00000196745.5	ENSMUSG00000027797.16	Dclk1	chr3	protein_coding	doublecortin-like kinase 1
chr3	55370516	55384334	+	55370516	55373994	3pMXE	0.33	50	50	ENSMUST00000167204.8	ENSMUSG00000027797.16	Dclk1	chr3	protein_coding	doublecortin-like kinase 1
chr3	55435462	55440991	+	55429344	55440991	A5SS	0.33	50	50	ENSMUST00000070418.9	ENSMUSG00000027797.16	Dclk1	chr3	protein_coding	doublecortin-like kinase 1
chr3	55424407	55440991	+	55424407	55429271	3pMXE	0.5	50	50	ENSMUST00000200352.2	ENSMUSG00000027797.16	Dclk1	chr3	protein_coding	doublecortin-like kinase 1
chr3	55301682	55308124	-	55290279	55308124	A3SS	0.5	50	50	ENSMUST00000196362.5	ENSMUSG00000105975.5	Gm9831	chr3	lncRNA	predicted gene 9831
chr3	55290279	55299216	-	55290279	55308124	A5SS	0.5	50	50	ENSMUST00000196362.5	ENSMUSG00000105975.5	Gm9831	chr3	lncRNA	predicted gene 9831
chr3	55557188;55557574	55557512;55572995	-	55557188	55572995	cassetteExon	0.5	100	100	ENSMUST00000029374.8	ENSMUSG00000027799.13	Nbea	chr3	protein_coding	neurobeachin
chr3	55689354	55693862	-	55631070	55693862	A3SS	0.5	50	50	ENSMUST00000029374.8	ENSMUSG00000027799.13	Nbea	chr3	protein_coding	neurobeachin
chr3	55693998	55694165	-	55693998	55712658	A5SS	0.5	50	50	ENSMUST00000029374.8	ENSMUSG00000027799.13	Nbea	chr3	protein_coding	neurobeachin
chr3	57200523	57201879	-	57200523	57202033	A5SS	0.5	50	50	ENSMUST00000171384.8	ENSMUSG00000027800.15	Tm4sf1	chr3	protein_coding	transmembrane 4 superfamily member 1
chr3	57202503	57209149	-	57202503;57209057	57208943;57209149	ES	0.5	50	50	ENSMUST00000196979.5	ENSMUSG00000027800.15	Tm4sf1	chr3	protein_coding	transmembrane 4 superfamily member 1
chr3	57482678	57483135	-	57482678	57483022	A5SS	0.5	50	50	ENSMUST00000029380.14	ENSMUSG00000027803.15	Wwtr1	chr3	protein_coding	WW domain containing transcription regulator 1
chr3	57530181	57533125	-	57529133	57533125	A3SS	0.25	50	50	ENSMUST00000199759.2	ENSMUSG00000097339.6	Gm26671	chr3	lncRNA	predicted gene, 26671
chr3	57530265	57533125	-	57529133	57533125	A3SS	0.25	50	50	ENSMUST00000199759.2	ENSMUSG00000097339.6	Gm26671	chr3	lncRNA	predicted gene, 26671
chr3	57530301	57533125	-	57529133	57533125	A3SS	0.25	50	50	ENSMUST00000199759.2	ENSMUSG00000097339.6	Gm26671	chr3	lncRNA	predicted gene, 26671
chr3	57529133	57529326	-	57529133	57533125	A5SS	0.5	50	50	ENSMUST00000199759.2	ENSMUSG00000097339.6	Gm26671	chr3	lncRNA	predicted gene, 26671
chr3	57530181	57533125	-	57530265	57533125	A3SS	0.25	50	50	ENSMUST00000180423.6	ENSMUSG00000097339.6	Gm26671	chr3	lncRNA	predicted gene, 26671
chr3	57530301	57533125	-	57530265	57533125	A3SS	0.25	50	50	ENSMUST00000180423.6	ENSMUSG00000097339.6	Gm26671	chr3	lncRNA	predicted gene, 26671
chr3	57530301	57533125	-	57530181	57533125	A3SS	0.25	50	50	ENSMUST00000197649.2	ENSMUSG00000097339.6	Gm26671	chr3	lncRNA	predicted gene, 26671
chr3	57557636	57558843	-	57557636;57558194	57558112;57558843	ES	0.5	50	50	ENSMUST00000160959.8	ENSMUSG00000036513.16	Commd2	chr3	protein_coding	COMM domain containing 2
chr3	57597850	57599678	-	57597878	57599678	A3SS	0.5	50	50	ENSMUST00000238789.2	ENSMUSG00000074591.9	Ankub1	chr3	protein_coding	ankrin repeat and ubiquitin domain containing 1
chr3	57575959	57580287	-	57575959	57580205	A5SS	0.5	50	50	ENSMUST00000238789.2	ENSMUSG00000074591.9	Ankub1	chr3	protein_coding	ankrin repeat and ubiquitin domain containing 1
chr3	57671803	57686804	+	57671803;57676541	57676461;57686804	ES	0.5	50	50	ENSMUST00000041826.14	ENSMUSG00000036503.14	Rnf13	chr3	protein_coding	ring finger protein 13
chr3	57643621;57671364	57671299;57671678	+	57643621	57671678	cassetteExon	0.5	100	100	ENSMUST00000041826.14	ENSMUSG00000036503.14	Rnf13	chr3	protein_coding	ring finger protein 13
chr3	57643621	57740994	+	57643621	57671678	A3SS&ES	0.33	50	50	ENSMUST00000041826.14	ENSMUSG00000036503.14	Rnf13	chr3	protein_coding	ring finger protein 13
chr3	57703706	57709139	+	57703706	57709868	A3SS	0.5	50	50	ENSMUST00000041826.14	ENSMUSG00000036503.14	Rnf13	chr3	protein_coding	ring finger protein 13
chr3	57714548	57717357	+	57714548	57727928	A3SS	0.5	50	50	ENSMUST00000041826.14	ENSMUSG00000036503.14	Rnf13	chr3	protein_coding	ring finger protein 13
chr3	57728021	57732523	+	57728021	57740385	A3SS	0.5	50	50	ENSMUST00000041826.14	ENSMUSG00000036503.14	Rnf13	chr3	protein_coding	ring finger protein 13
chr3	57740465	57740994	+	57740465	57740907	A3SS	0.5	50	50	ENSMUST00000041826.14	ENSMUSG00000036503.14	Rnf13	chr3	protein_coding	ring finger protein 13
chr3	57643530	57671678	+	57643621	57671678	A5SS	0.33	50	50	ENSMUST00000041826.14	ENSMUSG00000036503.14	Rnf13	chr3	protein_coding	ring finger protein 13
chr3	57703716	57709868	+	57703706	57709868	A5SS	0.5	50	50	ENSMUST00000041826.14	ENSMUSG00000036503.14	Rnf13	chr3	protein_coding	ring finger protein 13
chr3	57671364	57671678	+	57643530	57671678	A5SS	0.33	50	50	ENSMUST00000198510.5	ENSMUSG00000036503.14	Rnf13	chr3	protein_coding	ring finger protein 13
chr3	57643621	57671299	+	57643621	57740994	A3SS	0.33	50	50	ENSMUST00000197920.5	ENSMUSG00000036503.14	Rnf13	chr3	protein_coding	ring finger protein 13
chr3	57740465	57740994	+	57643621	57740994	A5SS	0.5	50	50	ENSMUST00000197920.5	ENSMUSG00000036503.14	Rnf13	chr3	protein_coding	ring finger protein 13
chr3	57671803	57686804	+	57671803	57676461	3pMXE	0.5	50	50	ENSMUST00000200600.5	ENSMUSG00000036503.14	Rnf13	chr3	protein_coding	ring finger protein 13
chr3	57752787	57752890	-	57752787	57754772	A5SS	0.33	50	50	ENSMUST00000066882.10	ENSMUSG00000027805.17	Pfn2	chr3	protein_coding	profilin 2
chr3	57752787	57754291	-	57752787	57754772	A5SS	0.33	50	50	ENSMUST00000066882.10	ENSMUSG00000027805.17	Pfn2	chr3	protein_coding	profilin 2
chr3	57752787	57752890	-	57752787	57754291	A5SS	0.33	50	50	ENSMUST00000119344.8	ENSMUSG00000027805.17	Pfn2	chr3	protein_coding	profilin 2
chr3	58325034	58366752	+	58325034;58335720	58335649;58366752	ES	0.33	50	50	ENSMUST00000099090.7	ENSMUSG00000027806.10	Tsc22d2	chr3	protein_coding	TSC22 domain family, member 2
chr3	58335720;58344896	58344738;58366752	+	58335720	58366752	cassetteExon	0.5	100	100	ENSMUST00000099090.7	ENSMUSG00000027806.10	Tsc22d2	chr3	protein_coding	TSC22 domain family, member 2
chr3	58344896	58366752	+	58325034	58366752	A5SS	0.33	50	50	ENSMUST00000199164.2	ENSMUSG00000027806.10	Tsc22d2	chr3	protein_coding	TSC22 domain family, member 2
chr3	58445029	58448461	+	58445029;58447067	58446949;58448461	ES	0.5	50	50	ENSMUST00000029387.15	ENSMUSG00000027810.15	Eif2a	chr3	protein_coding	eukaryotic translation initiation factor 2A
chr3	58445029	58447011	+	58445029	58446949	A3SS	0.33	50	50	ENSMUST00000029387.15	ENSMUSG00000027810.15	Eif2a	chr3	protein_coding	eukaryotic translation initiation factor 2A
chr3	58433858	58438508	+	58433507	58438508	A5SS	0.5	50	50	ENSMUST00000029387.15	ENSMUSG00000027810.15	Eif2a	chr3	protein_coding	eukaryotic translation initiation factor 2A
chr3	58445029	58448461	+	58445029;58447067	58447011;58448461	ES	0.5	50	50	ENSMUST00000135876.8	ENSMUSG00000027810.15	Eif2a	chr3	protein_coding	eukaryotic translation initiation factor 2A
chr3	58583864	58592971	-	58583864	58598817	A5SS	0.5	50	50	ENSMUST00000070368.8	ENSMUSG00000036432.9	Siah2	chr3	protein_coding	siah E3 ubiquitin protein ligase 2
chr3	58657918;58658600	58658377;58695852	+	58657918;58659759	58659524;58695852	MXE	0.5	100	100	ENSMUST00000203879.3	ENSMUSG00000097725.5	4930593A02Rik	chr3	lncRNA	RIKEN cDNA 4930593A02 gene
chr3	58640374	58645242	+	58640374	58657794	A3SS	0.5	50	50	ENSMUST00000181694.3	ENSMUSG00000097725.5	4930593A02Rik	chr3	lncRNA	RIKEN cDNA 4930593A02 gene
chr3	58647766	58657794	+	58640374	58657794	A5SS	0.5	50	50	ENSMUST00000181694.3	ENSMUSG00000097725.5	4930593A02Rik	chr3	lncRNA	RIKEN cDNA 4930593A02 gene
chr3	58714053;58717204	58717139;58717819	-	58714053	58717819	cassetteExon	0.5	100	100	ENSMUST00000212169.2	ENSMUSG00000101860.5	Mindy4b-ps	chr3	protein_coding	MINDY lysine 48 deubiquitinase 4B, pseudogene
chr3	58772572	58792209	-	58772572;58780175	58780122;58792209	ES	0.33	50	50	ENSMUST00000055636.13	ENSMUSG00000043850.16	Clrn1	chr3	protein_coding	clarin 1
chr3	58753872;58772572	58772393;58792209	-	58753872	58792209	cassetteExon	0.5	100	100	ENSMUST00000072551.7	ENSMUSG00000043850.16	Clrn1	chr3	protein_coding	clarin 1
chr3	58780175	58792209	-	58753872	58792209	A3SS	0.33	50	50	ENSMUST00000072551.7	ENSMUSG00000043850.16	Clrn1	chr3	protein_coding	clarin 1
chr3	58753872	58792209	-	58753872	58772393	5pMXE	0.5	50	50	ENSMUST00000161419.2	ENSMUSG00000043850.16	Clrn1	chr3	protein_coding	clarin 1
chr3	58945172	58949675	+	58945172;58946619	58946587;58949675	ES	0.5	50	50	ENSMUST00000040846.15	ENSMUSG00000056476.14	Med12l	chr3	protein_coding	mediator complex subunit 12-like
chr3	58999042;59000219	59000115;59000940	+	58999042	59000940	cassetteExon	0.5	100	100	ENSMUST00000040846.15	ENSMUSG00000056476.14	Med12l	chr3	protein_coding	mediator complex subunit 12-like
chr3	59169766	59170284	+	59169766	59170546	A3SS	0.5	50	50	ENSMUST00000199659.5	ENSMUSG00000056476.14	Med12l	chr3	protein_coding	mediator complex subunit 12-like
chr3	59170713	59172343	+	59170707	59172343	A5SS	0.5	50	50	ENSMUST00000199659.5	ENSMUSG00000056476.14	Med12l	chr3	protein_coding	mediator complex subunit 12-like
chr3	59205382	59208701	+	59205367	59208701	A5SS	0.5	50	50	ENSMUST00000199659.5	ENSMUSG00000056476.14	Med12l	chr3	protein_coding	mediator complex subunit 12-like
chr3	59023482;59023712	59023609;59037915	-	59023482	59037915	cassetteExon	0.5	100	100	ENSMUST00000197841.2	ENSMUSG00000036381.14	P2ry14	chr3	protein_coding	purinergic receptor P2Y, G-protein coupled, 14
chr3	59023712	59038264	-	59023712	59037915	5pMXE	0.2	50	50	ENSMUST00000065220.13	ENSMUSG00000036381.14	P2ry14	chr3	protein_coding	purinergic receptor P2Y, G-protein coupled, 14
chr3	59023712	59038425	-	59023712	59037915	5pMXE	0.2	50	50	ENSMUST00000065220.13	ENSMUSG00000036381.14	P2ry14	chr3	protein_coding	purinergic receptor P2Y, G-protein coupled, 14
chr3	59023712	59039811	-	59023712	59037915	5pMXE	0.2	50	50	ENSMUST00000065220.13	ENSMUSG00000036381.14	P2ry14	chr3	protein_coding	purinergic receptor P2Y, G-protein coupled, 14
chr3	59023712	59060840	-	59023712	59037915	5pMXE	0.2	50	50	ENSMUST00000065220.13	ENSMUSG00000036381.14	P2ry14	chr3	protein_coding	purinergic receptor P2Y, G-protein coupled, 14
chr3	59023482	59037915	-	59023482	59023609	A5SS&ES	0.5	50	50	ENSMUST00000196081.5	ENSMUSG00000036381.14	P2ry14	chr3	protein_coding	purinergic receptor P2Y, G-protein coupled, 14
chr3	59023712	59038264	-	59023712	59060840	A5SS	0.2	50	50	ENSMUST00000196081.5	ENSMUSG00000036381.14	P2ry14	chr3	protein_coding	purinergic receptor P2Y, G-protein coupled, 14
chr3	59023712	59038425	-	59023712	59060840	A5SS	0.2	50	50	ENSMUST00000196081.5	ENSMUSG00000036381.14	P2ry14	chr3	protein_coding	purinergic receptor P2Y, G-protein coupled, 14
chr3	59023712	59039811	-	59023712	59060840	A5SS	0.2	50	50	ENSMUST00000196081.5	ENSMUSG00000036381.14	P2ry14	chr3	protein_coding	purinergic receptor P2Y, G-protein coupled, 14
chr3	59023482	59037915	-	59023712	59037915	A3SS	0.5	50	50	ENSMUST00000091112.6	ENSMUSG00000036381.14	P2ry14	chr3	protein_coding	purinergic receptor P2Y, G-protein coupled, 14
chr3	59023712	59039811	-	59023712	59038425	5pMXE	0.2	50	50	ENSMUST00000197220.2	ENSMUSG00000036381.14	P2ry14	chr3	protein_coding	purinergic receptor P2Y, G-protein coupled, 14
chr3	59023712	59038264	-	59023712	59038425	A5SS	0.2	50	50	ENSMUST00000197220.2	ENSMUSG00000036381.14	P2ry14	chr3	protein_coding	purinergic receptor P2Y, G-protein coupled, 14
chr3	59023712	59039811	-	59023712	59038264	5pMXE	0.2	50	50	ENSMUST00000198838.2	ENSMUSG00000036381.14	P2ry14	chr3	protein_coding	purinergic receptor P2Y, G-protein coupled, 14
chr3	59127517	59134872	-	59127517;59127704	59127640;59134872	ES	0.5	50	50	ENSMUST00000196583.5	ENSMUSG00000036353.14	P2ry12	chr3	protein_coding	purinergic receptor P2Y, G-protein coupled 12
chr3	59127517	59170195	-	59127517;59135002	59134872;59170195	ES	0.5	50	50	ENSMUST00000050360.14	ENSMUSG00000036353.14	P2ry12	chr3	protein_coding	purinergic receptor P2Y, G-protein coupled 12
chr3	59127517	59134872	-	59127517	59127640	5pMXE	0.33	50	50	ENSMUST00000170388.6	ENSMUSG00000036353.14	P2ry12	chr3	protein_coding	purinergic receptor P2Y, G-protein coupled 12
chr3	59127517	59170195	-	59127517	59127640	5pMXE	0.33	50	50	ENSMUST00000170388.6	ENSMUSG00000036353.14	P2ry12	chr3	protein_coding	purinergic receptor P2Y, G-protein coupled 12
chr3	59248754	59251750	-	59248754	59251111	5pMXE	0.33	50	50	ENSMUST00000039419.12	ENSMUSG00000036334.13	Igsf10	chr3	protein_coding	immunoglobulin superfamily, member 10
chr3	59248754	59251424	-	59248754	59251111	A5SS	0.33	50	50	ENSMUST00000039419.12	ENSMUSG00000036334.13	Igsf10	chr3	protein_coding	immunoglobulin superfamily, member 10
chr3	59248754	59251750	-	59248754	59251424	5pMXE	0.33	50	50	ENSMUST00000193455.6	ENSMUSG00000036334.13	Igsf10	chr3	protein_coding	immunoglobulin superfamily, member 10
chr3	59733307	59745788	+	59685747	59745788	A5SS	0.5	50	50	ENSMUST00000094228.6	ENSMUSG00000074589.5	4930449A18Rik	chr3	transcribed_unprocessed_pseudogene	RIKEN cDNA 4930449A18 gene
chr3	59939362	59943232	+	59933646	59943232	A5SS	0.5	50	50	ENSMUST00000194896.2	ENSMUSG00000027761.5	Aadac	chr3	protein_coding	arylacetamide deacetylase
chr3	59989349;59992574	59992506;59993477	+	59989349	59993477	cassetteExon	0.5	100	100	ENSMUST00000029326.6	ENSMUSG00000027762.7	Sucnr1	chr3	protein_coding	succinate receptor 1
chr3	60380594;60408515	60408402;60503015	+	60380594	60503015	cassetteExon	0.5	100	100	ENSMUST00000195724.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60380594;60408844	60408402;60503015	+	60380594	60503015	cassetteExon	0.5	100	100	ENSMUST00000195724.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60380594;60436399	60436177;60503015	+	60380594	60503015	cassetteExon	0.5	100	100	ENSMUST00000195724.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60437225	60503015	+	60380594	60503015	A5SS	0.2	50	50	ENSMUST00000195724.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60380594	60503015	+	60380594;60437225	60436177;60503015	ES	0.2	50	50	ENSMUST00000195077.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60503185	60520684	+	60503185	60511115	3pMXE	0.33	50	50	ENSMUST00000195077.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60380594;60408515	60408402;60503015	+	60380594;60437225	60436177;60503015	MXE	0.5	100	100	ENSMUST00000195077.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60380594;60408844	60408402;60436177	+	60380594	60436177	cassetteExon	0.5	100	100	ENSMUST00000195077.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60380594;60408844	60408402;60503015	+	60380594;60437225	60436177;60503015	MXE	0.5	100	100	ENSMUST00000195077.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60503185;60504250	60504140;60511115	+	60503185	60511115	cassetteExon	0.5	100	100	ENSMUST00000195077.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60435944	60436177	+	60380594	60436177	A5SS	0.33	50	50	ENSMUST00000195077.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60436399	60503015	+	60437225	60503015	A5SS	0.2	50	50	ENSMUST00000195077.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60503185	60520684	+	60503185;60511315	60511115;60520684	ES	0.5	50	50	ENSMUST00000193647.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60520941	60523041	+	60520941;60522157	60522104;60523041	ES	0.5	50	50	ENSMUST00000193647.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60523194	60529567	+	60523194	60528844	3pMXE	0.33	50	50	ENSMUST00000193647.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60523194	60532545	+	60523194	60528844	3pMXE	0.33	50	50	ENSMUST00000193647.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60520941	60523146	+	60520941	60522104	A3SS&ES	0.33	50	50	ENSMUST00000193647.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60380594;60436399	60436177;60503015	+	60380594;60408515	60408402;60503015	MXE	0.5	100	100	ENSMUST00000195001.2	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60408515	60454367	+	60408515	60503015	A3SS	0.5	50	50	ENSMUST00000195001.2	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60408844	60503015	+	60408515	60503015	A5SS	0.2	50	50	ENSMUST00000195001.2	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60437225	60503015	+	60408515	60503015	A5SS	0.2	50	50	ENSMUST00000195001.2	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60523194	60529567	+	60523194;60528879	60528844;60529567	ES	0.25	50	50	ENSMUST00000192807.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60528879	60532545	+	60528879;60529661	60529567;60532545	ES	0.25	50	50	ENSMUST00000192807.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60380594;60408844	60408402;60529567	+	60380594;60528879	60503015;60529567	MXE	0.5	100	100	ENSMUST00000192807.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60529661;60531462	60531400;60532545	+	60529661	60532545	cassetteExon	0.5	100	100	ENSMUST00000192807.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60520941	60523146	+	60520941	60523041	A3SS	0.25	50	50	ENSMUST00000192807.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60408844	60454367	+	60408515	60454367	A5SS	0.5	50	50	ENSMUST00000192086.2	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60380594	60436177	+	60408844	60436177	5pMXE	0.33	50	50	ENSMUST00000099087.8	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60408844	60503015	+	60408844;60437225	60436177;60503015	ES	0.33	50	50	ENSMUST00000099087.8	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60408844	60454367	+	60408844	60436177	A3SS&ES	0.25	50	50	ENSMUST00000099087.8	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60435944	60436177	+	60408844	60436177	A5SS	0.33	50	50	ENSMUST00000099087.8	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60408844	60503015	+	60408844;60436399	60436177;60503015	ES	0.33	50	50	ENSMUST00000192637.2	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60408844	60436177	+	60408844	60529567	A3SS	0.25	50	50	ENSMUST00000191638.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60408844	60454367	+	60408844	60529567	A3SS	0.25	50	50	ENSMUST00000191638.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60408844	60503015	+	60408844	60529567	A3SS	0.25	50	50	ENSMUST00000191638.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60520941	60529567	+	60408844	60529567	A5SS	0.25	50	50	ENSMUST00000191638.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60523194	60529567	+	60408844	60529567	A5SS	0.25	50	50	ENSMUST00000191638.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60523194	60532545	+	60529661	60532545	A5SS&ES	0.25	50	50	ENSMUST00000191638.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60528879	60529567	+	60408844	60529567	A5SS	0.25	50	50	ENSMUST00000191638.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60528879	60532545	+	60529661	60532545	A5SS&ES	0.25	50	50	ENSMUST00000191638.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60408844	60503015	+	60408844	60436177	3pMXE	0.25	50	50	ENSMUST00000195839.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60408844	60503015	+	60408844	60454367	3pMXE	0.25	50	50	ENSMUST00000194003.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60380594	60503015	+	60408844	60503015	5pMXE	0.2	50	50	ENSMUST00000191747.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60437225	60503015	+	60408844	60503015	A5SS	0.2	50	50	ENSMUST00000191747.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60408844;60529661	60529567;60532545	+	60408844;60523194	60436177;60532545	MXE	0.5	100	100	ENSMUST00000194069.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60520941;60529661	60529567;60532545	+	60520941;60523194	60522104;60532545	MXE	0.5	100	100	ENSMUST00000194069.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60523194;60528879	60528844;60532545	+	60523194	60532545	cassetteExon	0.5	100	100	ENSMUST00000194069.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60523194;60529661	60529567;60532545	+	60523194	60532545	cassetteExon	0.5	100	100	ENSMUST00000194069.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60531462	60532545	+	60523194	60532545	A5SS	0.25	50	50	ENSMUST00000194069.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60520941	60529567	+	60520941;60523194	60523041;60529567	ES	0.33	50	50	ENSMUST00000194201.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60523194;60528879	60528844;60532545	+	60523194;60529661	60529567;60532545	MXE	0.5	100	100	ENSMUST00000194201.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60503185	60504140	+	60503185	60520684	A3SS	0.33	50	50	ENSMUST00000194201.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60520941;60529661	60529567;60532545	+	60520941;60528879	60523041;60532545	MXE	0.5	100	100	ENSMUST00000192607.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60531462	60532545	+	60528879	60532545	A5SS	0.25	50	50	ENSMUST00000192607.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60520941	60529567	+	60520941	60523041	3pMXE	0.25	50	50	ENSMUST00000192394.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60520941;60523194	60523041;60532545	+	60520941;60531462	60529567;60532545	MXE	0.5	100	100	ENSMUST00000193130.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60520941;60523194	60523146;60529567	+	60520941	60529567	cassetteExon	0.5	100	100	ENSMUST00000193130.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60520941;60523194	60523146;60532545	+	60520941;60531462	60529567;60532545	MXE	0.5	100	100	ENSMUST00000193130.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60520941	60522104	+	60520941	60529567	A3SS	0.25	50	50	ENSMUST00000193130.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60528879	60529567	+	60520941	60529567	A5SS	0.33	50	50	ENSMUST00000193130.6	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60520941;60529661	60529567;60532545	+	60520941;60528879	60523146;60532545	MXE	0.5	100	100	ENSMUST00000195817.3	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60503185	60520684	+	60511315	60520684	5pMXE	0.5	50	50	ENSMUST00000192520.2	ENSMUSG00000027763.14	Mbnl1	chr3	protein_coding	muscleblind like splicing factor 1
chr3	60912020	60914595	+	60912020	60914320	A3SS	0.5	50	50	ENSMUST00000029331.7	ENSMUSG00000027765.7	P2ry1	chr3	protein_coding	purinergic receptor P2Y, G-protein coupled 1
chr3	62365861	62367625	+	62365861;62367135	62367031;62367625	ES	0.5	50	50	ENSMUST00000079300.13	ENSMUSG00000036885.15	Arhgef26	chr3	protein_coding	Rho guanine nucleotide exchange factor (GEF) 26
chr3	62285065	62286122	+	62285065	62288252	A3SS	0.5	50	50	ENSMUST00000079300.13	ENSMUSG00000036885.15	Arhgef26	chr3	protein_coding	Rho guanine nucleotide exchange factor (GEF) 26
chr3	63208435	63235206	+	63208435;63234296	63234135;63235206	ES	0.5	50	50	ENSMUST00000194324.6	ENSMUSG00000027820.13	Mme	chr3	protein_coding	membrane metallo endopeptidase
chr3	63203036	63207546	+	63197447	63207546	A5SS	0.16	50	50	ENSMUST00000194324.6	ENSMUSG00000027820.13	Mme	chr3	protein_coding	membrane metallo endopeptidase
chr3	63203299	63207546	+	63197447	63207546	A5SS	0.16	50	50	ENSMUST00000194324.6	ENSMUSG00000027820.13	Mme	chr3	protein_coding	membrane metallo endopeptidase
chr3	63203370	63207546	+	63197447	63207546	A5SS	0.16	50	50	ENSMUST00000194324.6	ENSMUSG00000027820.13	Mme	chr3	protein_coding	membrane metallo endopeptidase
chr3	63203743	63207546	+	63197447	63207546	A5SS	0.16	50	50	ENSMUST00000194324.6	ENSMUSG00000027820.13	Mme	chr3	protein_coding	membrane metallo endopeptidase
chr3	63204556	63207546	+	63197447	63207546	A5SS	0.16	50	50	ENSMUST00000194324.6	ENSMUSG00000027820.13	Mme	chr3	protein_coding	membrane metallo endopeptidase
chr3	63203299	63207546	+	63203036	63207546	A5SS	0.16	50	50	ENSMUST00000194836.6	ENSMUSG00000027820.13	Mme	chr3	protein_coding	membrane metallo endopeptidase
chr3	63203370	63207546	+	63203036	63207546	A5SS	0.16	50	50	ENSMUST00000194836.6	ENSMUSG00000027820.13	Mme	chr3	protein_coding	membrane metallo endopeptidase
chr3	63203743	63207546	+	63203036	63207546	A5SS	0.16	50	50	ENSMUST00000194836.6	ENSMUSG00000027820.13	Mme	chr3	protein_coding	membrane metallo endopeptidase
chr3	63204556	63207546	+	63203036	63207546	A5SS	0.16	50	50	ENSMUST00000194836.6	ENSMUSG00000027820.13	Mme	chr3	protein_coding	membrane metallo endopeptidase
chr3	63203370	63207546	+	63203299	63207546	A5SS	0.16	50	50	ENSMUST00000194150.6	ENSMUSG00000027820.13	Mme	chr3	protein_coding	membrane metallo endopeptidase
chr3	63203743	63207546	+	63203299	63207546	A5SS	0.16	50	50	ENSMUST00000194150.6	ENSMUSG00000027820.13	Mme	chr3	protein_coding	membrane metallo endopeptidase
chr3	63204556	63207546	+	63203299	63207546	A5SS	0.16	50	50	ENSMUST00000194150.6	ENSMUSG00000027820.13	Mme	chr3	protein_coding	membrane metallo endopeptidase
chr3	63203743	63207546	+	63203370	63207546	A5SS	0.16	50	50	ENSMUST00000194134.6	ENSMUSG00000027820.13	Mme	chr3	protein_coding	membrane metallo endopeptidase
chr3	63204556	63207546	+	63203370	63207546	A5SS	0.16	50	50	ENSMUST00000194134.6	ENSMUSG00000027820.13	Mme	chr3	protein_coding	membrane metallo endopeptidase
chr3	63204556	63207546	+	63203743	63207546	A5SS	0.16	50	50	ENSMUST00000029400.7	ENSMUSG00000027820.13	Mme	chr3	protein_coding	membrane metallo endopeptidase
chr3	63606901	63609205	-	63606901;63606963	63606941;63609205	ES	0.2	50	50	ENSMUST00000160638.10	ENSMUSG00000036834.17	Plch1	chr3	protein_coding	phospholipase C, eta 1
chr3	63609559	63611555	-	63609559;63610044	63609985;63611555	ES	0.5	50	50	ENSMUST00000160638.10	ENSMUSG00000036834.17	Plch1	chr3	protein_coding	phospholipase C, eta 1
chr3	63691558	63778077	-	63691558	63758370	5pMXE	0.33	50	50	ENSMUST00000160638.10	ENSMUSG00000036834.17	Plch1	chr3	protein_coding	phospholipase C, eta 1
chr3	63606901;63607223	63607201;63609205	-	63606901;63606963	63606941;63609205	MXE	0.5	100	100	ENSMUST00000160638.10	ENSMUSG00000036834.17	Plch1	chr3	protein_coding	phospholipase C, eta 1
chr3	63606901;63607228	63607201;63609205	-	63606901;63606963	63606941;63609205	MXE	0.5	100	100	ENSMUST00000160638.10	ENSMUSG00000036834.17	Plch1	chr3	protein_coding	phospholipase C, eta 1
chr3	63606898	63609205	-	63606963	63609205	A3SS&ES	0.2	50	50	ENSMUST00000160638.10	ENSMUSG00000036834.17	Plch1	chr3	protein_coding	phospholipase C, eta 1
chr3	63626700	63628594	-	63626703	63628594	A3SS	0.5	50	50	ENSMUST00000160638.10	ENSMUSG00000036834.17	Plch1	chr3	protein_coding	phospholipase C, eta 1
chr3	63691558	63758344	-	63691558	63758370	A5SS	0.33	50	50	ENSMUST00000160638.10	ENSMUSG00000036834.17	Plch1	chr3	protein_coding	phospholipase C, eta 1
chr3	63691558	63778077	-	63691558	63758344	5pMXE	0.33	50	50	ENSMUST00000048134.16	ENSMUSG00000036834.17	Plch1	chr3	protein_coding	phospholipase C, eta 1
chr3	63606901;63607223	63606941;63609205	-	63606901	63609205	cassetteExon	0.5	100	100	ENSMUST00000048134.16	ENSMUSG00000036834.17	Plch1	chr3	protein_coding	phospholipase C, eta 1
chr3	63606901;63607223	63607201;63609205	-	63606901	63609205	cassetteExon	0.5	100	100	ENSMUST00000048134.16	ENSMUSG00000036834.17	Plch1	chr3	protein_coding	phospholipase C, eta 1
chr3	63606901;63607228	63606941;63609205	-	63606901	63609205	cassetteExon	0.5	100	100	ENSMUST00000048134.16	ENSMUSG00000036834.17	Plch1	chr3	protein_coding	phospholipase C, eta 1
chr3	63606901;63607228	63607201;63609205	-	63606901	63609205	cassetteExon	0.5	100	100	ENSMUST00000048134.16	ENSMUSG00000036834.17	Plch1	chr3	protein_coding	phospholipase C, eta 1
chr3	63606898	63609205	-	63606901	63609205	A3SS	0.2	50	50	ENSMUST00000048134.16	ENSMUSG00000036834.17	Plch1	chr3	protein_coding	phospholipase C, eta 1
chr3	63606898	63609205	-	63606898;63607223	63607201;63609205	ES	0.2	50	50	ENSMUST00000159374.3	ENSMUSG00000036834.17	Plch1	chr3	protein_coding	phospholipase C, eta 1
chr3	63606901	63607201	-	63606898	63607201	A3SS	0.5	50	50	ENSMUST00000159374.3	ENSMUSG00000036834.17	Plch1	chr3	protein_coding	phospholipase C, eta 1
chr3	63606901	63609205	-	63607223	63609205	A3SS&ES	0.2	50	50	ENSMUST00000159374.3	ENSMUSG00000036834.17	Plch1	chr3	protein_coding	phospholipase C, eta 1
chr3	63606963	63609205	-	63607223	63609205	A3SS&ES	0.2	50	50	ENSMUST00000159374.3	ENSMUSG00000036834.17	Plch1	chr3	protein_coding	phospholipase C, eta 1
chr3	63607228	63609205	-	63607223	63609205	A3SS	0.2	50	50	ENSMUST00000159374.3	ENSMUSG00000036834.17	Plch1	chr3	protein_coding	phospholipase C, eta 1
chr3	63606898	63609205	-	63607228	63609205	A3SS&ES	0.2	50	50	ENSMUST00000162269.9	ENSMUSG00000036834.17	Plch1	chr3	protein_coding	phospholipase C, eta 1
chr3	63606898	63609205	-	63607223	63609205	A3SS&ES	0.2	50	50	ENSMUST00000159676.9	ENSMUSG00000036834.17	Plch1	chr3	protein_coding	phospholipase C, eta 1
chr3	63778195;63793434	63793349;63806648	-	63778195	63806648	cassetteExon	0.5	100	100	ENSMUST00000177143.8	ENSMUSG00000036834.17	Plch1	chr3	protein_coding	phospholipase C, eta 1
chr3	63606898;63607228	63607201;63609205	-	63606898	63609205	cassetteExon	0.5	100	100	ENSMUST00000176861.2	ENSMUSG00000036834.17	Plch1	chr3	protein_coding	phospholipase C, eta 1
chr3	63831748	63832755	-	63827782	63832755	A3SS	0.5	50	50	ENSMUST00000061706.7	ENSMUSG00000048581.13	E130311K13Rik	chr3	protein_coding	RIKEN cDNA E130311K13 gene
chr3	63849950	63850643	-	63841325	63850643	A3SS	0.5	50	50	ENSMUST00000161659.8	ENSMUSG00000027822.17	Slc33a1	chr3	protein_coding	solute carrier family 33 (acetyl-CoA transporter), member 1
chr3	64178853	64186138	-	64178853;64183667	64182288;64186138	ES	0.33	50	50	ENSMUST00000233015.2	ENSMUSG00000091572.10	Vmn2r3	chr3	protein_coding	vomeronasal 2, receptor 3
chr3	64178853;64180648	64180418;64182288	-	64178853	64182288	cassetteExon	0.5	100	100	ENSMUST00000233015.2	ENSMUSG00000091572.10	Vmn2r3	chr3	protein_coding	vomeronasal 2, receptor 3
chr3	64174672	64178623	-	64168894	64178623	A3SS	0.5	50	50	ENSMUST00000233015.2	ENSMUSG00000091572.10	Vmn2r3	chr3	protein_coding	vomeronasal 2, receptor 3
chr3	64183145	64186138	-	64183667	64186138	A3SS	0.33	50	50	ENSMUST00000233015.2	ENSMUSG00000091572.10	Vmn2r3	chr3	protein_coding	vomeronasal 2, receptor 3
chr3	64183145	64186138	-	64178853	64186138	A3SS	0.33	50	50	ENSMUST00000233531.2	ENSMUSG00000091572.10	Vmn2r3	chr3	protein_coding	vomeronasal 2, receptor 3
chr3	64183667	64186138	-	64178853	64186138	A3SS	0.33	50	50	ENSMUST00000233531.2	ENSMUSG00000091572.10	Vmn2r3	chr3	protein_coding	vomeronasal 2, receptor 3
chr3	64178853	64180418	-	64178853	64186138	A5SS	0.33	50	50	ENSMUST00000233531.2	ENSMUSG00000091572.10	Vmn2r3	chr3	protein_coding	vomeronasal 2, receptor 3
chr3	64178853	64182288	-	64178853	64186138	A5SS	0.33	50	50	ENSMUST00000233531.2	ENSMUSG00000091572.10	Vmn2r3	chr3	protein_coding	vomeronasal 2, receptor 3
chr3	64178853	64186138	-	64178853;64183145	64180418;64186138	ES	0.33	50	50	ENSMUST00000233938.2	ENSMUSG00000091572.10	Vmn2r3	chr3	protein_coding	vomeronasal 2, receptor 3
chr3	64178853	64182288	-	64178853	64180418	A5SS	0.33	50	50	ENSMUST00000233938.2	ENSMUSG00000091572.10	Vmn2r3	chr3	protein_coding	vomeronasal 2, receptor 3
chr3	64178853	64186138	-	64178853;64183145	64182288;64186138	ES	0.33	50	50	ENSMUST00000232849.2	ENSMUSG00000091572.10	Vmn2r3	chr3	protein_coding	vomeronasal 2, receptor 3
chr3	64297024	64298368	-	64298182	64298368	A3SS	0.5	50	50	ENSMUST00000233020.2	ENSMUSG00000092049.10	Vmn2r4	chr3	protein_coding	vomeronasal 2, receptor 4
chr3	64297024	64298368	-	64297024;64298182	64297960;64298368	ES	0.5	50	50	ENSMUST00000233824.2	ENSMUSG00000092049.10	Vmn2r4	chr3	protein_coding	vomeronasal 2, receptor 4
chr3	64627039	64632213	-	64563093	64632213	A3SS	0.5	50	50	ENSMUST00000177146.2	ENSMUSG00000097538.2	Gm26939	chr3	lncRNA	predicted gene, 26939
chr3	64632977	64677707	-	64632266	64677707	A3SS	0.5	50	50	ENSMUST00000177146.2	ENSMUSG00000097538.2	Gm26939	chr3	lncRNA	predicted gene, 26939
chr3	64563093	64564893	-	64563093	64632213	A5SS	0.5	50	50	ENSMUST00000177146.2	ENSMUSG00000097538.2	Gm26939	chr3	lncRNA	predicted gene, 26939
chr3	64856954	65129260	+	64856954	65173912	A3SS	0.5	50	50	ENSMUST00000238901.2	ENSMUSG00000027827.18	Kcnab1	chr3	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 1
chr3	65272143	65272702	+	65272143	65278778	A3SS	0.5	50	50	ENSMUST00000238901.2	ENSMUSG00000027827.18	Kcnab1	chr3	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 1
chr3	64885218	65173912	+	64856954	65173912	A5SS	0.2	50	50	ENSMUST00000238901.2	ENSMUSG00000027827.18	Kcnab1	chr3	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 1
chr3	65017413	65173912	+	64856954	65173912	A5SS	0.2	50	50	ENSMUST00000238901.2	ENSMUSG00000027827.18	Kcnab1	chr3	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 1
chr3	65096463	65173912	+	64856954	65173912	A5SS	0.2	50	50	ENSMUST00000238901.2	ENSMUSG00000027827.18	Kcnab1	chr3	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 1
chr3	65169267	65173912	+	64856954	65173912	A5SS	0.2	50	50	ENSMUST00000238901.2	ENSMUSG00000027827.18	Kcnab1	chr3	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 1
chr3	65204917	65205090	+	65202723	65205090	A5SS	0.5	50	50	ENSMUST00000238901.2	ENSMUSG00000027827.18	Kcnab1	chr3	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 1
chr3	65017413	65173912	+	64885218	65173912	A5SS	0.2	50	50	ENSMUST00000239069.2	ENSMUSG00000027827.18	Kcnab1	chr3	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 1
chr3	65096463	65173912	+	64885218	65173912	A5SS	0.2	50	50	ENSMUST00000239069.2	ENSMUSG00000027827.18	Kcnab1	chr3	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 1
chr3	65169267	65173912	+	64885218	65173912	A5SS	0.2	50	50	ENSMUST00000239069.2	ENSMUSG00000027827.18	Kcnab1	chr3	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 1
chr3	65096463	65173912	+	65017413	65173912	A5SS	0.2	50	50	ENSMUST00000159525.8	ENSMUSG00000027827.18	Kcnab1	chr3	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 1
chr3	65169267	65173912	+	65017413	65173912	A5SS	0.2	50	50	ENSMUST00000159525.8	ENSMUSG00000027827.18	Kcnab1	chr3	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 1
chr3	65169267	65173912	+	65096463	65173912	A5SS	0.5	50	50	ENSMUST00000161404.8	ENSMUSG00000027827.18	Kcnab1	chr3	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 1
chr3	65424805	65436658	-	65424805	65435421	5pMXE	0.5	50	50	ENSMUST00000147424.8	ENSMUSG00000074580.12	4931440P22Rik	chr3	transcribed_processed_pseudogene	RIKEN cDNA 4931440P22 gene
chr3	65423069	65424060	-	65416637	65424060	A3SS	0.5	50	50	ENSMUST00000147424.8	ENSMUSG00000074580.12	4931440P22Rik	chr3	transcribed_processed_pseudogene	RIKEN cDNA 4931440P22 gene
chr3	65436586	65436658	-	65424805	65436658	A3SS	0.5	50	50	ENSMUST00000184377.3	ENSMUSG00000074580.12	4931440P22Rik	chr3	transcribed_processed_pseudogene	RIKEN cDNA 4931440P22 gene
chr3	65436053	65439194	+	65436053	65438645	A3SS	0.5	50	50	ENSMUST00000047906.10	ENSMUSG00000034640.10	Tiparp	chr3	protein_coding	TCDD-inducible poly(ADP-ribose) polymerase
chr3	65576599	65632732	+	65576599	65591313	3pMXE	0.33	50	50	ENSMUST00000099075.4	ENSMUSG00000074579.15	Lekr1	chr3	protein_coding	leucine, glutamate and lysine rich 1
chr3	65576599;65577034	65576925;65591313	+	65576599	65591313	cassetteExon	0.5	100	100	ENSMUST00000099075.4	ENSMUSG00000074579.15	Lekr1	chr3	protein_coding	leucine, glutamate and lysine rich 1
chr3	65574124	65576511	+	65573732	65576511	A5SS	0.5	50	50	ENSMUST00000099075.4	ENSMUSG00000074579.15	Lekr1	chr3	protein_coding	leucine, glutamate and lysine rich 1
chr3	65576599;65591527	65591313;65632732	+	65576599	65632732	cassetteExon	0.5	100	100	ENSMUST00000161794.8	ENSMUSG00000074579.15	Lekr1	chr3	protein_coding	leucine, glutamate and lysine rich 1
chr3	65576599	65576925	+	65576599	65632732	A3SS	0.33	50	50	ENSMUST00000161794.8	ENSMUSG00000074579.15	Lekr1	chr3	protein_coding	leucine, glutamate and lysine rich 1
chr3	65634677	65635585	+	65634677	65647103	A3SS	0.5	50	50	ENSMUST00000161794.8	ENSMUSG00000074579.15	Lekr1	chr3	protein_coding	leucine, glutamate and lysine rich 1
chr3	65858975	65864274	-	65858975;65862697	65862551;65864274	ES	0.5	50	50	ENSMUST00000129002.8	ENSMUSG00000027829.16	Ccnl1	chr3	protein_coding	cyclin L1
chr3	65856211;65857647	65857446;65857901	-	65856211	65857901	cassetteExon	0.5	100	100	ENSMUST00000129002.8	ENSMUSG00000027829.16	Ccnl1	chr3	protein_coding	cyclin L1
chr3	65856211;65857647	65857634;65857901	-	65856211	65857901	cassetteExon	0.5	100	100	ENSMUST00000129002.8	ENSMUSG00000027829.16	Ccnl1	chr3	protein_coding	cyclin L1
chr3	65858975	65860127	-	65858975	65862551	A5SS	0.2	50	50	ENSMUST00000129002.8	ENSMUSG00000027829.16	Ccnl1	chr3	protein_coding	cyclin L1
chr3	65858975	65860158	-	65858975	65862551	A5SS	0.2	50	50	ENSMUST00000129002.8	ENSMUSG00000027829.16	Ccnl1	chr3	protein_coding	cyclin L1
chr3	65858975	65862625	-	65858975	65862551	A5SS	0.2	50	50	ENSMUST00000129002.8	ENSMUSG00000027829.16	Ccnl1	chr3	protein_coding	cyclin L1
chr3	65858975	65864274	-	65858975;65862697	65862625;65864274	ES	0.5	50	50	ENSMUST00000154585.8	ENSMUSG00000027829.16	Ccnl1	chr3	protein_coding	cyclin L1
chr3	65861355	65862625	-	65858975	65862625	A3SS	0.5	50	50	ENSMUST00000154585.8	ENSMUSG00000027829.16	Ccnl1	chr3	protein_coding	cyclin L1
chr3	65856211	65857634	-	65856211	65857446	A5SS	0.33	50	50	ENSMUST00000154585.8	ENSMUSG00000027829.16	Ccnl1	chr3	protein_coding	cyclin L1
chr3	65858975	65860127	-	65858975	65862625	A5SS	0.2	50	50	ENSMUST00000154585.8	ENSMUSG00000027829.16	Ccnl1	chr3	protein_coding	cyclin L1
chr3	65858975	65860158	-	65858975	65862625	A5SS	0.2	50	50	ENSMUST00000154585.8	ENSMUSG00000027829.16	Ccnl1	chr3	protein_coding	cyclin L1
chr3	65858975	65860127	-	65858975	65864274	A5SS	0.2	50	50	ENSMUST00000029416.14	ENSMUSG00000027829.16	Ccnl1	chr3	protein_coding	cyclin L1
chr3	65858975	65860158	-	65858975	65864274	A5SS	0.2	50	50	ENSMUST00000029416.14	ENSMUSG00000027829.16	Ccnl1	chr3	protein_coding	cyclin L1
chr3	65858975	65860158	-	65858975	65860127	A5SS	0.2	50	50	ENSMUST00000144810.8	ENSMUSG00000027829.16	Ccnl1	chr3	protein_coding	cyclin L1
chr3	65856211	65857901	-	65857647	65857901	3pMXE	0.5	50	50	ENSMUST00000145186.8	ENSMUSG00000027829.16	Ccnl1	chr3	protein_coding	cyclin L1
chr3	66033389	66043685	-	66033389	66065331	A5SS	0.5	50	50	ENSMUST00000029419.8	ENSMUSG00000027831.10	Veph1	chr3	protein_coding	ventricular zone expressed PH domain-containing 1
chr3	66881276	66882777	-	66881240	66882777	A3SS	0.5	50	50	ENSMUST00000162098.9	ENSMUSG00000027833.17	Shox2	chr3	protein_coding	short stature homeobox 2
chr3	66885727	66886097	-	66885727	66888544	A5SS	0.33	50	50	ENSMUST00000162098.9	ENSMUSG00000027833.17	Shox2	chr3	protein_coding	short stature homeobox 2
chr3	66885727	66888399	-	66885727	66888544	A5SS	0.33	50	50	ENSMUST00000162098.9	ENSMUSG00000027833.17	Shox2	chr3	protein_coding	short stature homeobox 2
chr3	66885727	66886097	-	66885727	66888399	A5SS	0.33	50	50	ENSMUST00000162439.8	ENSMUSG00000027833.17	Shox2	chr3	protein_coding	short stature homeobox 2
chr3	66902045	66989869	+	66902045;66903923	66903798;66989869	ES	0.5	50	50	ENSMUST00000162036.8	ENSMUSG00000034544.18	Rsrc1	chr3	protein_coding	arginine/serine-rich coiled-coil 1
chr3	66903923	67088162	+	66903923;66990042	66989869;67088162	ES	0.5	50	50	ENSMUST00000162036.8	ENSMUSG00000034544.18	Rsrc1	chr3	protein_coding	arginine/serine-rich coiled-coil 1
chr3	67257348	67263554	+	67257348;67262959	67262807;67263554	ES	0.5	50	50	ENSMUST00000162036.8	ENSMUSG00000034544.18	Rsrc1	chr3	protein_coding	arginine/serine-rich coiled-coil 1
chr3	66902045	66903804	+	66902045	66903798	A3SS	0.33	50	50	ENSMUST00000162036.8	ENSMUSG00000034544.18	Rsrc1	chr3	protein_coding	arginine/serine-rich coiled-coil 1
chr3	67257348	67259029	+	67257348	67262807	A3SS	0.33	50	50	ENSMUST00000162036.8	ENSMUSG00000034544.18	Rsrc1	chr3	protein_coding	arginine/serine-rich coiled-coil 1
chr3	66893115	66901850	+	66888875	66901850	A5SS	0.16	50	50	ENSMUST00000162036.8	ENSMUSG00000034544.18	Rsrc1	chr3	protein_coding	arginine/serine-rich coiled-coil 1
chr3	66893139	66901850	+	66888875	66901850	A5SS	0.16	50	50	ENSMUST00000162036.8	ENSMUSG00000034544.18	Rsrc1	chr3	protein_coding	arginine/serine-rich coiled-coil 1
chr3	66893422	66901850	+	66888875	66901850	A5SS	0.16	50	50	ENSMUST00000162036.8	ENSMUSG00000034544.18	Rsrc1	chr3	protein_coding	arginine/serine-rich coiled-coil 1
chr3	66893521	66901850	+	66888875	66901850	A5SS	0.16	50	50	ENSMUST00000162036.8	ENSMUSG00000034544.18	Rsrc1	chr3	protein_coding	arginine/serine-rich coiled-coil 1
chr3	66896494	66901850	+	66888875	66901850	A5SS	0.16	50	50	ENSMUST00000162036.8	ENSMUSG00000034544.18	Rsrc1	chr3	protein_coding	arginine/serine-rich coiled-coil 1
chr3	66893139	66901850	+	66893139;66896494	66896367;66901850	ES	0.2	50	50	ENSMUST00000162362.8	ENSMUSG00000034544.18	Rsrc1	chr3	protein_coding	arginine/serine-rich coiled-coil 1
chr3	66902045	66989869	+	66902045	66903798	3pMXE	0.33	50	50	ENSMUST00000162362.8	ENSMUSG00000034544.18	Rsrc1	chr3	protein_coding	arginine/serine-rich coiled-coil 1
chr3	66893115	66901850	+	66896494	66901850	A5SS&ES	0.2	50	50	ENSMUST00000162362.8	ENSMUSG00000034544.18	Rsrc1	chr3	protein_coding	arginine/serine-rich coiled-coil 1
chr3	66893422	66901850	+	66896494	66901850	A5SS&ES	0.2	50	50	ENSMUST00000162362.8	ENSMUSG00000034544.18	Rsrc1	chr3	protein_coding	arginine/serine-rich coiled-coil 1
chr3	66893521	66901850	+	66896494	66901850	A5SS&ES	0.2	50	50	ENSMUST00000162362.8	ENSMUSG00000034544.18	Rsrc1	chr3	protein_coding	arginine/serine-rich coiled-coil 1
chr3	66893115	66901850	+	66893139	66901850	A5SS	0.16	50	50	ENSMUST00000065074.14	ENSMUSG00000034544.18	Rsrc1	chr3	protein_coding	arginine/serine-rich coiled-coil 1
chr3	66893422	66901850	+	66893139	66901850	A5SS	0.16	50	50	ENSMUST00000065074.14	ENSMUSG00000034544.18	Rsrc1	chr3	protein_coding	arginine/serine-rich coiled-coil 1
chr3	66893521	66901850	+	66893139	66901850	A5SS	0.16	50	50	ENSMUST00000065074.14	ENSMUSG00000034544.18	Rsrc1	chr3	protein_coding	arginine/serine-rich coiled-coil 1
chr3	66903923	67088162	+	66903923	66989869	3pMXE	0.5	50	50	ENSMUST00000162620.9	ENSMUSG00000034544.18	Rsrc1	chr3	protein_coding	arginine/serine-rich coiled-coil 1
chr3	67257348	67263554	+	67257348	67259029	3pMXE	0.33	50	50	ENSMUST00000065047.13	ENSMUSG00000034544.18	Rsrc1	chr3	protein_coding	arginine/serine-rich coiled-coil 1
chr3	66902045;66990042	66989869;67088162	+	66902045;66903923	66903798;67088162	MXE	0.5	100	100	ENSMUST00000065047.13	ENSMUSG00000034544.18	Rsrc1	chr3	protein_coding	arginine/serine-rich coiled-coil 1
chr3	66902045;66903923	66903804;66989869	+	66902045	66989869	cassetteExon	0.5	100	100	ENSMUST00000046542.13	ENSMUSG00000034544.18	Rsrc1	chr3	protein_coding	arginine/serine-rich coiled-coil 1
chr3	66902045;66903923	66903804;67088162	+	66902045;66990042	66989869;67088162	MXE	0.5	100	100	ENSMUST00000046542.13	ENSMUSG00000034544.18	Rsrc1	chr3	protein_coding	arginine/serine-rich coiled-coil 1
chr3	66893422	66901850	+	66893115	66901850	A5SS	0.16	50	50	ENSMUST00000162693.8	ENSMUSG00000034544.18	Rsrc1	chr3	protein_coding	arginine/serine-rich coiled-coil 1
chr3	66893521	66901850	+	66893115	66901850	A5SS	0.16	50	50	ENSMUST00000162693.8	ENSMUSG00000034544.18	Rsrc1	chr3	protein_coding	arginine/serine-rich coiled-coil 1
chr3	66893521	66901850	+	66893422	66901850	A5SS	0.16	50	50	ENSMUST00000161726.2	ENSMUSG00000034544.18	Rsrc1	chr3	protein_coding	arginine/serine-rich coiled-coil 1
chr3	67292031;67298355	67298311;67300225	+	67292031	67300225	cassetteExon	0.5	100	100	ENSMUST00000077916.12	ENSMUSG00000048416.16	Mlf1	chr3	protein_coding	myeloid leukemia factor 1
chr3	67281595	67287300	+	67281595	67291884	A3SS	0.5	50	50	ENSMUST00000077916.12	ENSMUSG00000048416.16	Mlf1	chr3	protein_coding	myeloid leukemia factor 1
chr3	67292031	67300173	+	67292031	67300225	A3SS	0.33	50	50	ENSMUST00000077916.12	ENSMUSG00000048416.16	Mlf1	chr3	protein_coding	myeloid leukemia factor 1
chr3	67292031	67298311	+	67292031	67300173	A3SS	0.33	50	50	ENSMUST00000126628.7	ENSMUSG00000048416.16	Mlf1	chr3	protein_coding	myeloid leukemia factor 1
chr3	67365303	67365892	+	67365303	67375140	A3SS	0.5	50	50	ENSMUST00000077271.9	ENSMUSG00000027774.17	Gfm1	chr3	protein_coding	G elongation factor, mitochondrial 1
chr3	67492109	67492931	+	67492029	67492931	A5SS	0.5	50	50	ENSMUST00000029344.10	ENSMUSG00000027775.10	Mfsd1	chr3	protein_coding	major facilitator superfamily domain containing 1
chr3	67972340	68401907	+	67962731	68401907	A5SS	0.2	50	50	ENSMUST00000182006.4	ENSMUSG00000102422.2	Iqschfp	chr3	protein_coding	Iqcj and Schip1 fusion protein
chr3	67972340	68503483	+	68402590	68503483	A5SS&ES	0.25	50	50	ENSMUST00000182006.4	ENSMUSG00000102422.2	Iqschfp	chr3	protein_coding	Iqcj and Schip1 fusion protein
chr3	68375562	68401907	+	67962731	68401907	A5SS	0.2	50	50	ENSMUST00000182006.4	ENSMUSG00000102422.2	Iqschfp	chr3	protein_coding	Iqcj and Schip1 fusion protein
chr3	68400938	68401907	+	67962731	68401907	A5SS	0.2	50	50	ENSMUST00000182006.4	ENSMUSG00000102422.2	Iqschfp	chr3	protein_coding	Iqcj and Schip1 fusion protein
chr3	68401702	68401907	+	67962731	68401907	A5SS	0.2	50	50	ENSMUST00000182006.4	ENSMUSG00000102422.2	Iqschfp	chr3	protein_coding	Iqcj and Schip1 fusion protein
chr3	68479996	68503483	+	68402590	68503483	A5SS	0.25	50	50	ENSMUST00000182006.4	ENSMUSG00000102422.2	Iqschfp	chr3	protein_coding	Iqcj and Schip1 fusion protein
chr3	68491757	68503483	+	68402590	68503483	A5SS	0.25	50	50	ENSMUST00000182006.4	ENSMUSG00000102422.2	Iqschfp	chr3	protein_coding	Iqcj and Schip1 fusion protein
chr3	67972340	68503483	+	67972340;68402590	68401907;68503483	ES	0.25	50	50	ENSMUST00000029346.13	ENSMUSG00000027777.16	Schip1	chr3	protein_coding	schwannomin interacting protein 1
chr3	68375562	68401907	+	67972340	68401907	A5SS	0.2	50	50	ENSMUST00000029346.13	ENSMUSG00000027777.16	Schip1	chr3	protein_coding	schwannomin interacting protein 1
chr3	68400938	68401907	+	67972340	68401907	A5SS	0.2	50	50	ENSMUST00000029346.13	ENSMUSG00000027777.16	Schip1	chr3	protein_coding	schwannomin interacting protein 1
chr3	68401702	68401907	+	67972340	68401907	A5SS	0.2	50	50	ENSMUST00000029346.13	ENSMUSG00000027777.16	Schip1	chr3	protein_coding	schwannomin interacting protein 1
chr3	67972340	68401907	+	67972340	68503483	A3SS	0.5	50	50	ENSMUST00000169909.10	ENSMUSG00000027777.16	Schip1	chr3	protein_coding	schwannomin interacting protein 1
chr3	68479996	68503483	+	67972340	68503483	A5SS	0.25	50	50	ENSMUST00000169909.10	ENSMUSG00000027777.16	Schip1	chr3	protein_coding	schwannomin interacting protein 1
chr3	68491757	68503483	+	67972340	68503483	A5SS	0.25	50	50	ENSMUST00000169909.10	ENSMUSG00000027777.16	Schip1	chr3	protein_coding	schwannomin interacting protein 1
chr3	68400938	68401907	+	68375562	68401907	A5SS	0.2	50	50	ENSMUST00000182532.8	ENSMUSG00000027777.16	Schip1	chr3	protein_coding	schwannomin interacting protein 1
chr3	68401702	68401907	+	68375562	68401907	A5SS	0.2	50	50	ENSMUST00000182532.8	ENSMUSG00000027777.16	Schip1	chr3	protein_coding	schwannomin interacting protein 1
chr3	68401702	68401907	+	68400938	68401907	A5SS	0.2	50	50	ENSMUST00000192555.6	ENSMUSG00000027777.16	Schip1	chr3	protein_coding	schwannomin interacting protein 1
chr3	68491757	68503483	+	68479996	68503483	A5SS	0.25	50	50	ENSMUST00000170788.9	ENSMUSG00000027777.16	Schip1	chr3	protein_coding	schwannomin interacting protein 1
chr3	68825958	68838155	-	68825958;68835124	68835060;68838155	ES	0.5	50	50	ENSMUST00000107812.8	ENSMUSG00000027778.16	Ift80	chr3	protein_coding	intraflagellar transport 80
chr3	68847537	68869513	-	68847537;68857866	68857687;68869513	ES	0.5	50	50	ENSMUST00000107812.8	ENSMUSG00000027778.16	Ift80	chr3	protein_coding	intraflagellar transport 80
chr3	68901915;68911634	68911598;68911765	-	68901915	68911765	cassetteExon	0.5	100	100	ENSMUST00000107812.8	ENSMUSG00000027778.16	Ift80	chr3	protein_coding	intraflagellar transport 80
chr3	68880681	68892748	-	68875289	68892748	A3SS	0.5	50	50	ENSMUST00000107812.8	ENSMUSG00000027778.16	Ift80	chr3	protein_coding	intraflagellar transport 80
chr3	68875289	68880969	-	68875289	68892748	A5SS	0.5	50	50	ENSMUST00000107812.8	ENSMUSG00000027778.16	Ift80	chr3	protein_coding	intraflagellar transport 80
chr3	68901915	68911765	-	68901915	68911598	A5SS	0.5	50	50	ENSMUST00000148031.2	ENSMUSG00000027778.16	Ift80	chr3	protein_coding	intraflagellar transport 80
chr3	68913546	68914597	+	68913546	68914522	A3SS	0.33	50	50	ENSMUST00000042901.15	ENSMUSG00000034349.15	Smc4	chr3	protein_coding	structural maintenance of chromosomes 4
chr3	68913546	68916867	+	68913546	68914522	A3SS&ES	0.33	50	50	ENSMUST00000042901.15	ENSMUSG00000034349.15	Smc4	chr3	protein_coding	structural maintenance of chromosomes 4
chr3	68933318	68934896	+	68933318	68934826	A3SS	0.5	50	50	ENSMUST00000042901.15	ENSMUSG00000034349.15	Smc4	chr3	protein_coding	structural maintenance of chromosomes 4
chr3	68912448	68913409	+	68912423	68913409	A5SS	0.5	50	50	ENSMUST00000042901.15	ENSMUSG00000034349.15	Smc4	chr3	protein_coding	structural maintenance of chromosomes 4
chr3	68913557	68914522	+	68913546	68914522	A5SS	0.5	50	50	ENSMUST00000042901.15	ENSMUSG00000034349.15	Smc4	chr3	protein_coding	structural maintenance of chromosomes 4
chr3	68925662	68926508	+	68925544	68926508	A5SS	0.5	50	50	ENSMUST00000042901.15	ENSMUSG00000034349.15	Smc4	chr3	protein_coding	structural maintenance of chromosomes 4
chr3	68913546	68916867	+	68913546	68914597	A3SS&ES	0.33	50	50	ENSMUST00000107803.7	ENSMUSG00000034349.15	Smc4	chr3	protein_coding	structural maintenance of chromosomes 4
chr3	68951175	68951739	-	68951175	68951946	A5SS	0.33	50	50	ENSMUST00000107802.8	ENSMUSG00000034317.15	Trim59	chr3	protein_coding	tripartite motif-containing 59
chr3	68951175	68951743	-	68951175	68951946	A5SS	0.33	50	50	ENSMUST00000107802.8	ENSMUSG00000034317.15	Trim59	chr3	protein_coding	tripartite motif-containing 59
chr3	68951175	68951739	-	68951175	68951743	A5SS	0.33	50	50	ENSMUST00000136512.3	ENSMUSG00000034317.15	Trim59	chr3	protein_coding	tripartite motif-containing 59
chr3	69009581	69033843	-	69009581	69034065	A5SS	0.5	50	50	ENSMUST00000029353.9	ENSMUSG00000027782.11	Kpna4	chr3	protein_coding	karyopherin (importin) alpha 4
chr3	69449909	69456659	+	69405278	69456659	A5SS	0.5	50	50	ENSMUST00000029355.9	ENSMUSG00000027784.11	Ppm1l	chr3	protein_coding	protein phosphatase 1 (formerly 2C)-like
chr3	69629799	69636671	+	69629799	69631590	3pMXE	0.5	50	50	ENSMUST00000149680.8	ENSMUSG00000027787.15	Nmd3	chr3	protein_coding	NMD3 ribosome export adaptor
chr3	69636751;69637435	69637279;69637738	+	69636751	69637738	cassetteExon	0.5	100	100	ENSMUST00000029358.15	ENSMUSG00000027787.15	Nmd3	chr3	protein_coding	NMD3 ribosome export adaptor
chr3	69633790	69636671	+	69629799	69636671	A5SS	0.5	50	50	ENSMUST00000143041.8	ENSMUSG00000027787.15	Nmd3	chr3	protein_coding	NMD3 ribosome export adaptor
chr3	69745508;69766783	69766753;69767164	-	69745508	69767164	cassetteExon	0.5	100	100	ENSMUST00000051239.13	ENSMUSG00000043461.14	Sptssb	chr3	protein_coding	serine palmitoyltransferase, small subunit B
chr3	72958788	72964881	-	72958788	72963876	5pMXE	0.5	50	50	ENSMUST00000192477.2	ENSMUSG00000048304.9	Slitrk3	chr3	protein_coding	SLIT and NTRK-like family, member 3
chr3	72973915	73146630	+	72973915	73101985	3pMXE	0.5	50	50	ENSMUST00000192263.2	ENSMUSG00000103428.2	Gm20754	chr3	lncRNA	predicted gene, 20754
chr3	73609432;73613927	73613872;73615468	-	73609432	73615468	cassetteExon	0.5	100	100	ENSMUST00000029367.6	ENSMUSG00000027792.12	Bche	chr3	protein_coding	butyrylcholinesterase
chr3	73611637	73613872	-	73609432	73613872	A3SS	0.5	50	50	ENSMUST00000138216.8	ENSMUSG00000027792.12	Bche	chr3	protein_coding	butyrylcholinesterase
chr3	75048437	75054684	-	75048437	75050895	5pMXE	0.5	50	50	ENSMUST00000107778.9	ENSMUSG00000034151.14	Zbbx	chr3	protein_coding	zinc finger, B-box domain containing
chr3	74985989	74989036	-	74985984	74989036	A3SS	0.5	50	50	ENSMUST00000107778.9	ENSMUSG00000034151.14	Zbbx	chr3	protein_coding	zinc finger, B-box domain containing
chr3	75000489	75012931	-	75000504	75012931	A3SS	0.5	50	50	ENSMUST00000107778.9	ENSMUSG00000034151.14	Zbbx	chr3	protein_coding	zinc finger, B-box domain containing
chr3	75359125	75388809	-	75338555	75388809	A3SS	0.5	50	50	ENSMUST00000193989.4	ENSMUSG00000104301.4	Wdr49	chr3	protein_coding	WD repeat domain 49
chr3	75338555	75357200	-	75338555	75388809	A5SS	0.5	50	50	ENSMUST00000193989.4	ENSMUSG00000104301.4	Wdr49	chr3	protein_coding	WD repeat domain 49
chr3	75448685;75459145	75458997;75464029	-	75448685	75464029	cassetteExon	0.5	100	100	ENSMUST00000161137.8	ENSMUSG00000027835.12	Pdcd10	chr3	protein_coding	programmed cell death 10
chr3	75440897	75448467	-	75440901	75448467	A3SS	0.5	50	50	ENSMUST00000161137.8	ENSMUSG00000027835.12	Pdcd10	chr3	protein_coding	programmed cell death 10
chr3	75464949	75520387	+	75464949;75500199	75500158;75520387	ES	0.5	50	50	ENSMUST00000161776.8	ENSMUSG00000027834.16	Serpini1	chr3	protein_coding	serine (or cysteine) peptidase inhibitor, clade I, member 1
chr3	75464949	75518450	+	75464949	75500158	A3SS&ES	0.33	50	50	ENSMUST00000161776.8	ENSMUSG00000027834.16	Serpini1	chr3	protein_coding	serine (or cysteine) peptidase inhibitor, clade I, member 1
chr3	75464949	75518450	+	75464949	75520387	A3SS	0.33	50	50	ENSMUST00000029423.9	ENSMUSG00000027834.16	Serpini1	chr3	protein_coding	serine (or cysteine) peptidase inhibitor, clade I, member 1
chr3	75805439;75809791	75809708;75810554	-	75805439	75810554	cassetteExon	0.5	100	100	ENSMUST00000038563.14	ENSMUSG00000034109.16	Golim4	chr3	protein_coding	golgi integral membrane protein 4
chr3	75802381	75805278	-	75802444	75805278	A3SS	0.5	50	50	ENSMUST00000038563.14	ENSMUSG00000034109.16	Golim4	chr3	protein_coding	golgi integral membrane protein 4
chr3	75805439	75810554	-	75805439	75809708	5pMXE	0.5	50	50	ENSMUST00000150904.2	ENSMUSG00000034109.16	Golim4	chr3	protein_coding	golgi integral membrane protein 4
chr3	76500884	76536220	+	76500884;76527813	76527787;76536220	ES	0.5	50	50	ENSMUST00000038364.15	ENSMUSG00000034098.15	Fstl5	chr3	protein_coding	follistatin-like 5
chr3	76443671	76452789	+	76443671	76496254	A3SS	0.5	50	50	ENSMUST00000038364.15	ENSMUSG00000034098.15	Fstl5	chr3	protein_coding	follistatin-like 5
chr3	75983043	76052256	+	75982281	76052256	A5SS	0.5	50	50	ENSMUST00000038364.15	ENSMUSG00000034098.15	Fstl5	chr3	protein_coding	follistatin-like 5
chr3	79019609	79053078	-	79019609	79052163	5pMXE	0.25	50	50	ENSMUST00000118100.8	ENSMUSG00000062232.15	Rapgef2	chr3	protein_coding	Rap guanine nucleotide exchange factor (GEF) 2
chr3	79019609	79077046	-	79019609	79052163	5pMXE	0.25	50	50	ENSMUST00000118100.8	ENSMUSG00000062232.15	Rapgef2	chr3	protein_coding	Rap guanine nucleotide exchange factor (GEF) 2
chr3	79019609	79038005	-	79019609	79052163	A5SS	0.25	50	50	ENSMUST00000118100.8	ENSMUSG00000062232.15	Rapgef2	chr3	protein_coding	Rap guanine nucleotide exchange factor (GEF) 2
chr3	79019609	79077046	-	79019609	79053078	5pMXE	0.25	50	50	ENSMUST00000118340.7	ENSMUSG00000062232.15	Rapgef2	chr3	protein_coding	Rap guanine nucleotide exchange factor (GEF) 2
chr3	79019609	79038005	-	79019609	79053078	A5SS	0.25	50	50	ENSMUST00000118340.7	ENSMUSG00000062232.15	Rapgef2	chr3	protein_coding	Rap guanine nucleotide exchange factor (GEF) 2
chr3	79019609;79038023	79038005;79077046	-	79019609	79077046	cassetteExon	0.5	100	100	ENSMUST00000195708.2	ENSMUSG00000062232.15	Rapgef2	chr3	protein_coding	Rap guanine nucleotide exchange factor (GEF) 2
chr3	79080382	79080462	-	79080382	79082281	A5SS	0.5	50	50	ENSMUST00000195708.2	ENSMUSG00000062232.15	Rapgef2	chr3	protein_coding	Rap guanine nucleotide exchange factor (GEF) 2
chr3	79082356	79088514	-	79082356	79103242	A5SS	0.5	50	50	ENSMUST00000195708.2	ENSMUSG00000062232.15	Rapgef2	chr3	protein_coding	Rap guanine nucleotide exchange factor (GEF) 2
chr3	79326726	79356552	+	79326726	79337229	3pMXE	0.5	50	50	ENSMUST00000195157.2	ENSMUSG00000091685.7	Gm17359	chr3	protein_coding	predicted gene, 17359
chr3	79252847	79312989	+	79244065	79312989	A5SS	0.5	50	50	ENSMUST00000195157.2	ENSMUSG00000091685.7	Gm17359	chr3	protein_coding	predicted gene, 17359
chr3	79413585	79415394	-	79413585;79415235	79415146;79415394	ES	0.5	50	50	ENSMUST00000133154.7	ENSMUSG00000061175.13	Fnip2	chr3	protein_coding	folliculin interacting protein 2
chr3	79411820	79413514	-	79407774	79413514	A3SS	0.5	50	50	ENSMUST00000133154.7	ENSMUSG00000061175.13	Fnip2	chr3	protein_coding	folliculin interacting protein 2
chr3	79425498	79438850	-	79425498	79474816	A5SS	0.5	50	50	ENSMUST00000133154.7	ENSMUSG00000061175.13	Fnip2	chr3	protein_coding	folliculin interacting protein 2
chr3	79425498	79474816	-	79413585	79474816	A3SS	0.5	50	50	ENSMUST00000139171.2	ENSMUSG00000061175.13	Fnip2	chr3	protein_coding	folliculin interacting protein 2
chr3	79413585	79415146	-	79413585	79474816	A5SS	0.33	50	50	ENSMUST00000139171.2	ENSMUSG00000061175.13	Fnip2	chr3	protein_coding	folliculin interacting protein 2
chr3	79413585	79415394	-	79413585	79474816	A5SS	0.33	50	50	ENSMUST00000139171.2	ENSMUSG00000061175.13	Fnip2	chr3	protein_coding	folliculin interacting protein 2
chr3	79501057;79501252	79501164;79502509	+	79501057	79502509	cassetteExon	0.5	100	100	ENSMUST00000161460.8	ENSMUSG00000027804.14	Ppid	chr3	protein_coding	peptidylprolyl isomerase D (cyclophilin D)
chr3	79502615;79503505	79503399;79504992	+	79502615	79504992	cassetteExon	0.5	100	100	ENSMUST00000029382.13	ENSMUSG00000027804.14	Ppid	chr3	protein_coding	peptidylprolyl isomerase D (cyclophilin D)
chr3	79502615	79504992	+	79503505	79504992	5pMXE	0.5	50	50	ENSMUST00000161876.2	ENSMUSG00000027804.14	Ppid	chr3	protein_coding	peptidylprolyl isomerase D (cyclophilin D)
chr3	79535708	79535825	-	79530985	79535825	A3SS	0.5	50	50	ENSMUST00000029386.14	ENSMUSG00000027809.15	Etfdh	chr3	protein_coding	electron transferring flavoprotein, dehydrogenase
chr3	79530985	79535788	-	79530985	79535825	A5SS	0.5	50	50	ENSMUST00000029386.14	ENSMUSG00000027809.15	Etfdh	chr3	protein_coding	electron transferring flavoprotein, dehydrogenase
chr3	79586054	79594107	-	79586054;79589853	79589748;79594107	ES	0.5	50	50	ENSMUST00000078527.13	ENSMUSG00000034009.15	Rxfp1	chr3	protein_coding	relaxin/insulin-like family peptide receptor 1
chr3	79563408	79563550	-	79559704	79563550	A3SS	0.5	50	50	ENSMUST00000078527.13	ENSMUSG00000034009.15	Rxfp1	chr3	protein_coding	relaxin/insulin-like family peptide receptor 1
chr3	79746613	79759301	-	79746613	79749695	5pMXE	0.2	50	50	ENSMUST00000029568.7	ENSMUSG00000027956.12	Tmem144	chr3	protein_coding	transmembrane protein 144
chr3	79746613	79760001	-	79746613	79749695	5pMXE	0.2	50	50	ENSMUST00000029568.7	ENSMUSG00000027956.12	Tmem144	chr3	protein_coding	transmembrane protein 144
chr3	79746613	79748854	-	79746613	79749695	A5SS	0.2	50	50	ENSMUST00000029568.7	ENSMUSG00000027956.12	Tmem144	chr3	protein_coding	transmembrane protein 144
chr3	79746613	79748974	-	79746613	79749695	A5SS	0.2	50	50	ENSMUST00000029568.7	ENSMUSG00000027956.12	Tmem144	chr3	protein_coding	transmembrane protein 144
chr3	79746613	79759301	-	79746613	79748854	5pMXE	0.2	50	50	ENSMUST00000168038.8	ENSMUSG00000027956.12	Tmem144	chr3	protein_coding	transmembrane protein 144
chr3	79746613	79760001	-	79746613	79748854	5pMXE	0.2	50	50	ENSMUST00000168038.8	ENSMUSG00000027956.12	Tmem144	chr3	protein_coding	transmembrane protein 144
chr3	79746613	79748974	-	79746613	79748854	A5SS	0.2	50	50	ENSMUST00000168038.8	ENSMUSG00000027956.12	Tmem144	chr3	protein_coding	transmembrane protein 144
chr3	79746613	79760001	-	79746613;79759375	79759301;79760001	ES	0.5	50	50	ENSMUST00000193410.3	ENSMUSG00000027956.12	Tmem144	chr3	protein_coding	transmembrane protein 144
chr3	79746613	79748974	-	79746613	79759301	A5SS	0.2	50	50	ENSMUST00000193410.3	ENSMUSG00000027956.12	Tmem144	chr3	protein_coding	transmembrane protein 144
chr3	79746613	79748974	-	79746613	79760001	A5SS	0.2	50	50	ENSMUST00000192341.2	ENSMUSG00000027956.12	Tmem144	chr3	protein_coding	transmembrane protein 144
chr3	79791997	79815896	+	79791997;79794437	79793295;79815896	ES	0.5	50	50	ENSMUST00000118853.8	ENSMUSG00000027955.17	Gask1b	chr3	protein_coding	golgi associated kinase 1B
chr3	79792533	79793295	+	79791997	79793295	A5SS	0.5	50	50	ENSMUST00000118853.8	ENSMUSG00000027955.17	Gask1b	chr3	protein_coding	golgi associated kinase 1B
chr3	79791997	79793295	+	79791997	79815896	A3SS	0.5	50	50	ENSMUST00000145992.2	ENSMUSG00000027955.17	Gask1b	chr3	protein_coding	golgi associated kinase 1B
chr3	79794437	79815896	+	79791997	79815896	A5SS	0.5	50	50	ENSMUST00000145992.2	ENSMUSG00000027955.17	Gask1b	chr3	protein_coding	golgi associated kinase 1B
chr3	80596658;80597825	80597711;80598627	-	80596658	80598627	cassetteExon	0.5	100	100	ENSMUST00000075316.10	ENSMUSG00000033981.15	Gria2	chr3	protein_coding	glutamate receptor, ionotropic, AMPA2 (alpha 2)
chr3	80596658;80597825	80597711;80599592	-	80596658;80598741	80598627;80599592	MXE	0.5	100	100	ENSMUST00000075316.10	ENSMUSG00000033981.15	Gria2	chr3	protein_coding	glutamate receptor, ionotropic, AMPA2 (alpha 2)
chr3	80598741;80599050	80599010;80599592	-	80598741	80599592	cassetteExon	0.5	100	100	ENSMUST00000075316.10	ENSMUSG00000033981.15	Gria2	chr3	protein_coding	glutamate receptor, ionotropic, AMPA2 (alpha 2)
chr3	80597825;80598741	80598627;80599592	-	80597825	80599592	cassetteExon	0.5	100	100	ENSMUST00000107745.8	ENSMUSG00000033981.15	Gria2	chr3	protein_coding	glutamate receptor, ionotropic, AMPA2 (alpha 2)
chr3	80596658;80599050	80598627;80599592	-	80596658;80597825	80597711;80599592	MXE	0.5	100	100	ENSMUST00000107745.8	ENSMUSG00000033981.15	Gria2	chr3	protein_coding	glutamate receptor, ionotropic, AMPA2 (alpha 2)
chr3	80597825;80599050	80598627;80599592	-	80597825	80599592	cassetteExon	0.5	100	100	ENSMUST00000107745.8	ENSMUSG00000033981.15	Gria2	chr3	protein_coding	glutamate receptor, ionotropic, AMPA2 (alpha 2)
chr3	80758507	80767468	-	80758507;80763244	80763092;80767468	ES	0.5	50	50	ENSMUST00000135043.8	ENSMUSG00000028020.17	Glrb	chr3	protein_coding	glycine receptor, beta subunit
chr3	80787039	80819275	-	80787035	80819275	A3SS	0.33	50	50	ENSMUST00000135043.8	ENSMUSG00000028020.17	Glrb	chr3	protein_coding	glycine receptor, beta subunit
chr3	80816245	80819275	-	80787035	80819275	A3SS	0.33	50	50	ENSMUST00000135043.8	ENSMUSG00000028020.17	Glrb	chr3	protein_coding	glycine receptor, beta subunit
chr3	80787039;80816245	80816094;80819275	-	80787039	80819275	cassetteExon	0.5	100	100	ENSMUST00000029654.15	ENSMUSG00000028020.17	Glrb	chr3	protein_coding	glycine receptor, beta subunit
chr3	80758507	80767468	-	80763244	80767468	3pMXE	0.5	50	50	ENSMUST00000107743.8	ENSMUSG00000028020.17	Glrb	chr3	protein_coding	glycine receptor, beta subunit
chr3	80944861;81038383	81038325;81048712	+	80944861	81048712	cassetteExon	0.5	100	100	ENSMUST00000029652.4	ENSMUSG00000028019.10	Pdgfc	chr3	protein_coding	platelet-derived growth factor, C polypeptide
chr3	81882736	81883080	-	81882736	81882966	A5SS	0.5	50	50	ENSMUST00000029645.14	ENSMUSG00000028011.17	Tdo2	chr3	protein_coding	tryptophan 2,3-dioxygenase
chr3	81904297	81906891	+	81904297;81906427	81906271;81906891	ES	0.5	50	50	ENSMUST00000142889.2	ENSMUSG00000028008.11	Asic5	chr3	protein_coding	acid-sensing (proton-gated) ion channel family member 5
chr3	81941728	81942049	-	81941745	81942049	A3SS	0.5	50	50	ENSMUST00000029635.14	ENSMUSG00000028005.14	Gucy1b1	chr3	protein_coding	guanylate cyclase 1, soluble, beta 1
chr3	81958678	81965548	-	81954017	81965548	A3SS	0.5	50	50	ENSMUST00000029635.14	ENSMUSG00000028005.14	Gucy1b1	chr3	protein_coding	guanylate cyclase 1, soluble, beta 1
chr3	82002206	82009291	-	82002206;82005067	82004913;82009291	ES	0.5	50	50	ENSMUST00000193924.6	ENSMUSG00000033910.14	Gucy1a1	chr3	protein_coding	guanylate cyclase 1, soluble, alpha 1
chr3	82026556	82052570	-	82026556	82052119	5pMXE	0.33	50	50	ENSMUST00000193924.6	ENSMUSG00000033910.14	Gucy1a1	chr3	protein_coding	guanylate cyclase 1, soluble, alpha 1
chr3	82026556	82052979	-	82026556	82052119	5pMXE	0.33	50	50	ENSMUST00000193924.6	ENSMUSG00000033910.14	Gucy1a1	chr3	protein_coding	guanylate cyclase 1, soluble, alpha 1
chr3	82026556	82052570	-	82026556	82052979	A5SS	0.33	50	50	ENSMUST00000048976.8	ENSMUSG00000033910.14	Gucy1a1	chr3	protein_coding	guanylate cyclase 1, soluble, alpha 1
chr3	82287553	82290515	+	82287553;82289290	82289201;82290515	ES	0.5	50	50	ENSMUST00000193559.6	ENSMUSG00000033900.14	Map9	chr3	protein_coding	microtubule-associated protein 9
chr3	82265562	82266282	+	82265478	82266282	A5SS	0.33	50	50	ENSMUST00000193559.6	ENSMUSG00000033900.14	Map9	chr3	protein_coding	microtubule-associated protein 9
chr3	82265621	82266282	+	82265478	82266282	A5SS	0.33	50	50	ENSMUST00000193559.6	ENSMUSG00000033900.14	Map9	chr3	protein_coding	microtubule-associated protein 9
chr3	82265562	82266282	+	82265562	82266338	A3SS	0.5	50	50	ENSMUST00000192595.6	ENSMUSG00000033900.14	Map9	chr3	protein_coding	microtubule-associated protein 9
chr3	82265621	82266282	+	82265562	82266282	A5SS	0.33	50	50	ENSMUST00000091014.10	ENSMUSG00000033900.14	Map9	chr3	protein_coding	microtubule-associated protein 9
chr3	82287553	82290515	+	82287553	82289201	3pMXE	0.5	50	50	ENSMUST00000194622.2	ENSMUSG00000033900.14	Map9	chr3	protein_coding	microtubule-associated protein 9
chr3	82448801	82455144	-	82448801	82455140	A5SS	0.5	50	50	ENSMUST00000029633.5	ENSMUSG00000028004.13	Npy2r	chr3	protein_coding	neuropeptide Y receptor Y2
chr3	82448820	82455144	-	82448801	82455144	A3SS	0.5	50	50	ENSMUST00000098997.5	ENSMUSG00000028004.13	Npy2r	chr3	protein_coding	neuropeptide Y receptor Y2
chr3	82745766	82771212	-	82744739	82771212	A3SS	0.33	50	50	ENSMUST00000048647.14	ENSMUSG00000033882.16	Rbm46	chr3	protein_coding	RNA binding motif protein 46
chr3	82749840	82771212	-	82744739	82771212	A3SS	0.33	50	50	ENSMUST00000048647.14	ENSMUSG00000033882.16	Rbm46	chr3	protein_coding	RNA binding motif protein 46
chr3	82745766;82749840	82749781;82771212	-	82745766	82771212	cassetteExon	0.5	100	100	ENSMUST00000182637.9	ENSMUSG00000033882.16	Rbm46	chr3	protein_coding	RNA binding motif protein 46
chr3	82786133;82825048	82824894;82848036	+	82786133	82848036	cassetteExon	0.5	100	100	ENSMUST00000147649.8	ENSMUSG00000086273.8	Rbm46os	chr3	lncRNA	RNA binding motif protein 46, opposite strand
chr3	82824460	82824894	+	82786133	82824894	A5SS	0.5	50	50	ENSMUST00000156457.8	ENSMUSG00000086273.8	Rbm46os	chr3	lncRNA	RNA binding motif protein 46, opposite strand
chr3	82977108	82977930	+	82977108	82977904	A3SS	0.5	50	50	ENSMUST00000150268.8	ENSMUSG00000027998.12	Plrg1	chr3	protein_coding	pleiotropic regulator 1
chr3	82966660	82967144	+	82966687	82967144	A5SS	0.5	50	50	ENSMUST00000150268.8	ENSMUSG00000027998.12	Plrg1	chr3	protein_coding	pleiotropic regulator 1
chr3	83676713	83677411	+	83676713	83680425	A3SS	0.33	50	50	ENSMUST00000029625.8	ENSMUSG00000027996.14	Sfrp2	chr3	protein_coding	secreted frizzled-related protein 2
chr3	83676713	83679347	+	83676713	83680425	A3SS	0.33	50	50	ENSMUST00000029625.8	ENSMUSG00000027996.14	Sfrp2	chr3	protein_coding	secreted frizzled-related protein 2
chr3	83676713	83679347	+	83676713	83677411	3pMXE	0.33	50	50	ENSMUST00000140261.8	ENSMUSG00000027996.14	Sfrp2	chr3	protein_coding	secreted frizzled-related protein 2
chr3	83813732	83817676	-	83813732;83816641	83816459;83817676	ES	0.5	50	50	ENSMUST00000191758.6	ENSMUSG00000033767.15	Tmem131l	chr3	protein_coding	transmembrane 131 like
chr3	83807722	83808653	-	83807725	83808653	A3SS	0.5	50	50	ENSMUST00000191758.6	ENSMUSG00000033767.15	Tmem131l	chr3	protein_coding	transmembrane 131 like
chr3	83820692	83826758	-	83820695	83826758	A3SS	0.5	50	50	ENSMUST00000191758.6	ENSMUSG00000033767.15	Tmem131l	chr3	protein_coding	transmembrane 131 like
chr3	83829866	83830255	-	83829869	83830255	A3SS	0.5	50	50	ENSMUST00000191758.6	ENSMUSG00000033767.15	Tmem131l	chr3	protein_coding	transmembrane 131 like
chr3	83850136	83850847	-	83850136	83867994	A5SS	0.5	50	50	ENSMUST00000191758.6	ENSMUSG00000033767.15	Tmem131l	chr3	protein_coding	transmembrane 131 like
chr3	83946692	83947327	-	83946692	83947284	A5SS	0.5	50	50	ENSMUST00000191758.6	ENSMUSG00000033767.15	Tmem131l	chr3	protein_coding	transmembrane 131 like
chr3	83813732	83817676	-	83813732	83816459	5pMXE	0.5	50	50	ENSMUST00000195245.6	ENSMUSG00000033767.15	Tmem131l	chr3	protein_coding	transmembrane 131 like
chr3	84117661	84212360	-	84117661	84211897	5pMXE	0.14	50	50	ENSMUST00000107692.8	ENSMUSG00000027993.17	Trim2	chr3	protein_coding	tripartite motif-containing 2
chr3	84117661	84212548	-	84117661	84211897	5pMXE	0.14	50	50	ENSMUST00000107692.8	ENSMUSG00000027993.17	Trim2	chr3	protein_coding	tripartite motif-containing 2
chr3	84209219	84211897	-	84117661	84211897	A3SS	0.5	50	50	ENSMUST00000107692.8	ENSMUSG00000027993.17	Trim2	chr3	protein_coding	tripartite motif-containing 2
chr3	84098543	84098812	-	84098543	84099388	A5SS	0.5	50	50	ENSMUST00000107692.8	ENSMUSG00000027993.17	Trim2	chr3	protein_coding	tripartite motif-containing 2
chr3	84117661	84119893	-	84117661	84211897	A5SS	0.14	50	50	ENSMUST00000107692.8	ENSMUSG00000027993.17	Trim2	chr3	protein_coding	tripartite motif-containing 2
chr3	84117661	84127936	-	84117661	84211897	A5SS	0.14	50	50	ENSMUST00000107692.8	ENSMUSG00000027993.17	Trim2	chr3	protein_coding	tripartite motif-containing 2
chr3	84117661	84166632	-	84117661	84211897	A5SS	0.14	50	50	ENSMUST00000107692.8	ENSMUSG00000027993.17	Trim2	chr3	protein_coding	tripartite motif-containing 2
chr3	84117661	84177941	-	84117661	84211897	A5SS	0.14	50	50	ENSMUST00000107692.8	ENSMUSG00000027993.17	Trim2	chr3	protein_coding	tripartite motif-containing 2
chr3	84117661	84177941	-	84117661	84166632	5pMXE	0.14	50	50	ENSMUST00000107691.8	ENSMUSG00000027993.17	Trim2	chr3	protein_coding	tripartite motif-containing 2
chr3	84117661	84212360	-	84117661	84166632	5pMXE	0.14	50	50	ENSMUST00000107691.8	ENSMUSG00000027993.17	Trim2	chr3	protein_coding	tripartite motif-containing 2
chr3	84117661	84212548	-	84117661	84166632	5pMXE	0.14	50	50	ENSMUST00000107691.8	ENSMUSG00000027993.17	Trim2	chr3	protein_coding	tripartite motif-containing 2
chr3	84117658	84166632	-	84117661	84166632	A3SS	0.33	50	50	ENSMUST00000107691.8	ENSMUSG00000027993.17	Trim2	chr3	protein_coding	tripartite motif-containing 2
chr3	84165599	84166632	-	84117661	84166632	A3SS	0.33	50	50	ENSMUST00000107691.8	ENSMUSG00000027993.17	Trim2	chr3	protein_coding	tripartite motif-containing 2
chr3	84117661	84119893	-	84117661	84166632	A5SS	0.14	50	50	ENSMUST00000107691.8	ENSMUSG00000027993.17	Trim2	chr3	protein_coding	tripartite motif-containing 2
chr3	84117661	84127936	-	84117661	84166632	A5SS	0.14	50	50	ENSMUST00000107691.8	ENSMUSG00000027993.17	Trim2	chr3	protein_coding	tripartite motif-containing 2
chr3	84117661	84177941	-	84117661	84127936	5pMXE	0.14	50	50	ENSMUST00000107695.9	ENSMUSG00000027993.17	Trim2	chr3	protein_coding	tripartite motif-containing 2
chr3	84117661	84212360	-	84117661	84127936	5pMXE	0.14	50	50	ENSMUST00000107695.9	ENSMUSG00000027993.17	Trim2	chr3	protein_coding	tripartite motif-containing 2
chr3	84117661	84212548	-	84117661	84127936	5pMXE	0.14	50	50	ENSMUST00000107695.9	ENSMUSG00000027993.17	Trim2	chr3	protein_coding	tripartite motif-containing 2
chr3	84117658	84127936	-	84117661	84127936	A3SS	0.5	50	50	ENSMUST00000107695.9	ENSMUSG00000027993.17	Trim2	chr3	protein_coding	tripartite motif-containing 2
chr3	84117661	84119893	-	84117661	84127936	A5SS	0.14	50	50	ENSMUST00000107695.9	ENSMUSG00000027993.17	Trim2	chr3	protein_coding	tripartite motif-containing 2
chr3	84117661	84177941	-	84117661	84119893	5pMXE	0.14	50	50	ENSMUST00000065380.13	ENSMUSG00000027993.17	Trim2	chr3	protein_coding	tripartite motif-containing 2
chr3	84117661	84212360	-	84117661	84119893	5pMXE	0.14	50	50	ENSMUST00000065380.13	ENSMUSG00000027993.17	Trim2	chr3	protein_coding	tripartite motif-containing 2
chr3	84117661	84212548	-	84117661	84119893	5pMXE	0.14	50	50	ENSMUST00000065380.13	ENSMUSG00000027993.17	Trim2	chr3	protein_coding	tripartite motif-containing 2
chr3	84117661	84212360	-	84117661	84177941	5pMXE	0.14	50	50	ENSMUST00000054990.11	ENSMUSG00000027993.17	Trim2	chr3	protein_coding	tripartite motif-containing 2
chr3	84117661	84212548	-	84117661	84177941	5pMXE	0.14	50	50	ENSMUST00000054990.11	ENSMUSG00000027993.17	Trim2	chr3	protein_coding	tripartite motif-containing 2
chr3	84117661	84212548	-	84117661	84212360	A5SS	0.14	50	50	ENSMUST00000122849.8	ENSMUSG00000027993.17	Trim2	chr3	protein_coding	tripartite motif-containing 2
chr3	84165599	84166632	-	84117658	84166632	A3SS	0.33	50	50	ENSMUST00000147901.8	ENSMUSG00000027993.17	Trim2	chr3	protein_coding	tripartite motif-containing 2
chr3	84117658	84127936	-	84117658	84166632	A5SS	0.5	50	50	ENSMUST00000147901.8	ENSMUSG00000027993.17	Trim2	chr3	protein_coding	tripartite motif-containing 2
chr3	84352503	84371579	-	84364578	84371579	A3SS&ES	0.5	50	50	ENSMUST00000107689.7	ENSMUSG00000041842.16	Fhdc1	chr3	protein_coding	FH2 domain containing 1
chr3	84382084	84386257	-	84382084	84387675	A5SS	0.33	50	50	ENSMUST00000107689.7	ENSMUSG00000041842.16	Fhdc1	chr3	protein_coding	FH2 domain containing 1
chr3	84382084	84386656	-	84382084	84387675	A5SS	0.33	50	50	ENSMUST00000107689.7	ENSMUSG00000041842.16	Fhdc1	chr3	protein_coding	FH2 domain containing 1
chr3	84382084	84386257	-	84382084	84386656	A5SS	0.33	50	50	ENSMUST00000091002.8	ENSMUSG00000041842.16	Fhdc1	chr3	protein_coding	FH2 domain containing 1
chr3	84435105;84436572	84436477;84441894	-	84435105	84441894	cassetteExon	0.5	100	100	ENSMUST00000098990.10	ENSMUSG00000074513.10	Arfip1	chr3	protein_coding	ADP-ribosylation factor interacting protein 1
chr3	84435105;84436572	84436498;84441894	-	84435105	84441894	cassetteExon	0.5	100	100	ENSMUST00000098990.10	ENSMUSG00000074513.10	Arfip1	chr3	protein_coding	ADP-ribosylation factor interacting protein 1
chr3	84442002	84447877	-	84442002	84455241	A5SS	0.5	50	50	ENSMUST00000098990.10	ENSMUSG00000074513.10	Arfip1	chr3	protein_coding	ADP-ribosylation factor interacting protein 1
chr3	84435105	84436477	-	84435105	84436498	A5SS	0.33	50	50	ENSMUST00000107687.9	ENSMUSG00000074513.10	Arfip1	chr3	protein_coding	ADP-ribosylation factor interacting protein 1
chr3	85724598;85727320	85727154;85794434	-	85724598	85794434	cassetteExon	0.5	100	100	ENSMUST00000154148.8	ENSMUSG00000102805.6	Gm37240	chr3	protein_coding	predicted gene, 37240
chr3	85629857	85692525	-	84447929	85692525	A3SS	0.5	50	50	ENSMUST00000154148.8	ENSMUSG00000102805.6	Gm37240	chr3	protein_coding	predicted gene, 37240
chr3	85709976	85724479	-	85692631	85724479	A3SS	0.5	50	50	ENSMUST00000154148.8	ENSMUSG00000102805.6	Gm37240	chr3	protein_coding	predicted gene, 37240
chr3	85779497	85794434	-	85724598	85794434	A3SS	0.33	50	50	ENSMUST00000154148.8	ENSMUSG00000102805.6	Gm37240	chr3	protein_coding	predicted gene, 37240
chr3	85779497	85794434	-	85727320	85794434	A3SS	0.33	50	50	ENSMUST00000125216.3	ENSMUSG00000102805.6	Gm37240	chr3	protein_coding	predicted gene, 37240
chr3	84591897	84592803	+	84591897	84596883	A3SS	0.5	50	50	ENSMUST00000107682.2	ENSMUSG00000056498.14	Tmem154	chr3	protein_coding	transmembrane protein 154
chr3	84771318	84810808	+	84771318;84771507	84771444;84810808	ES	0.33	50	50	ENSMUST00000107679.8	ENSMUSG00000028086.16	Fbxw7	chr3	protein_coding	F-box and WD-40 domain protein 7
chr3	84771507;84797559	84797402;84810808	+	84771507	84810808	cassetteExon	0.5	100	100	ENSMUST00000107679.8	ENSMUSG00000028086.16	Fbxw7	chr3	protein_coding	F-box and WD-40 domain protein 7
chr3	84833106	84862182	+	84811386	84862182	A5SS	0.33	50	50	ENSMUST00000107679.8	ENSMUSG00000028086.16	Fbxw7	chr3	protein_coding	F-box and WD-40 domain protein 7
chr3	84859946	84862182	+	84811386	84862182	A5SS	0.33	50	50	ENSMUST00000107679.8	ENSMUSG00000028086.16	Fbxw7	chr3	protein_coding	F-box and WD-40 domain protein 7
chr3	84797559	84810808	+	84771318	84810808	A5SS	0.33	50	50	ENSMUST00000212597.2	ENSMUSG00000028086.16	Fbxw7	chr3	protein_coding	F-box and WD-40 domain protein 7
chr3	84859946	84862182	+	84833106	84862182	A5SS	0.33	50	50	ENSMUST00000107675.8	ENSMUSG00000028086.16	Fbxw7	chr3	protein_coding	F-box and WD-40 domain protein 7
chr3	85465825	85481126	-	85464744	85481126	A3SS	0.5	50	50	ENSMUST00000148478.2	ENSMUSG00000085527.2	Gm15535	chr3	lncRNA	predicted gene 15535
chr3	85552355	85559588	+	85552355	85553502	3pMXE	0.5	50	50	ENSMUST00000107672.8	ENSMUSG00000028085.13	Gatb	chr3	protein_coding	glutamyl-tRNA(Gln) amidotransferase, subunit B
chr3	85509280	85511761	+	85509280	85511688	A3SS	0.5	50	50	ENSMUST00000107672.8	ENSMUSG00000028085.13	Gatb	chr3	protein_coding	glutamyl-tRNA(Gln) amidotransferase, subunit B
chr3	85583568;85588339	85588248;85590887	-	85583568	85590887	cassetteExon	0.5	100	100	ENSMUST00000118408.8	ENSMUSG00000051000.18	Fam160a1	chr3	protein_coding	family with sequence similarity 160, member A1
chr3	85629857	85637566	-	85629857	85692525	A5SS	0.5	50	50	ENSMUST00000119077.8	ENSMUSG00000051000.18	Fam160a1	chr3	protein_coding	family with sequence similarity 160, member A1
chr3	85992664	86005454	+	85992664;86001104	86000997;86005454	ES	0.5	50	50	ENSMUST00000238443.2	ENSMUSG00000028082.15	Sh3d19	chr3	protein_coding	SH3 domain protein D19
chr3	86011654	86014519	+	86011654;86014345	86014277;86014519	ES	0.5	50	50	ENSMUST00000238443.2	ENSMUSG00000028082.15	Sh3d19	chr3	protein_coding	SH3 domain protein D19
chr3	85982495;85986291	85986252;85987702	+	85982495	85987702	cassetteExon	0.5	100	100	ENSMUST00000238443.2	ENSMUSG00000028082.15	Sh3d19	chr3	protein_coding	SH3 domain protein D19
chr3	85946307	85948133	+	85878731	85948133	A5SS	0.5	50	50	ENSMUST00000238443.2	ENSMUSG00000028082.15	Sh3d19	chr3	protein_coding	SH3 domain protein D19
chr3	86439552	86447210	+	86439516	86447210	A5SS	0.5	50	50	ENSMUST00000192145.6	ENSMUSG00000028080.17	Lrba	chr3	protein_coding	LPS-responsive beige-like anchor
chr3	86449641	86449882	+	86447356	86449882	A5SS	0.5	50	50	ENSMUST00000192145.6	ENSMUSG00000028080.17	Lrba	chr3	protein_coding	LPS-responsive beige-like anchor
chr3	86455096	86513177	+	86450018	86513177	A5SS	0.33	50	50	ENSMUST00000192145.6	ENSMUSG00000028080.17	Lrba	chr3	protein_coding	LPS-responsive beige-like anchor
chr3	86455584	86513177	+	86450018	86513177	A5SS	0.33	50	50	ENSMUST00000192145.6	ENSMUSG00000028080.17	Lrba	chr3	protein_coding	LPS-responsive beige-like anchor
chr3	86455584	86513177	+	86455096	86513177	A5SS	0.33	50	50	ENSMUST00000195398.2	ENSMUSG00000028080.17	Lrba	chr3	protein_coding	LPS-responsive beige-like anchor
chr3	86699418	86706318	-	86699418;86701220	86701124;86706318	ES	0.5	50	50	ENSMUST00000191752.6	ENSMUSG00000028078.15	Dclk2	chr3	protein_coding	doublecortin-like kinase 2
chr3	86699418;86700606	86700526;86701124	-	86699418	86701124	cassetteExon	0.5	100	100	ENSMUST00000191752.6	ENSMUSG00000028078.15	Dclk2	chr3	protein_coding	doublecortin-like kinase 2
chr3	86732037;86738178	86738131;86739040	-	86732037	86739040	cassetteExon	0.5	100	100	ENSMUST00000191752.6	ENSMUSG00000028078.15	Dclk2	chr3	protein_coding	doublecortin-like kinase 2
chr3	86723737	86731943	-	86723740	86731943	A3SS	0.5	50	50	ENSMUST00000191752.6	ENSMUSG00000028078.15	Dclk2	chr3	protein_coding	doublecortin-like kinase 2
chr3	86699418	86705197	-	86699418	86701124	A5SS&ES	0.25	50	50	ENSMUST00000191752.6	ENSMUSG00000028078.15	Dclk2	chr3	protein_coding	doublecortin-like kinase 2
chr3	86699418	86706318	-	86701220	86706318	A3SS	0.5	50	50	ENSMUST00000192773.6	ENSMUSG00000028078.15	Dclk2	chr3	protein_coding	doublecortin-like kinase 2
chr3	86694719	86696619	-	86694719	86695929	A5SS&ES	0.25	50	50	ENSMUST00000192773.6	ENSMUSG00000028078.15	Dclk2	chr3	protein_coding	doublecortin-like kinase 2
chr3	86694719	86696716	-	86694719	86695929	A5SS&ES	0.25	50	50	ENSMUST00000192773.6	ENSMUSG00000028078.15	Dclk2	chr3	protein_coding	doublecortin-like kinase 2
chr3	86694719	86699302	-	86694719	86695929	A5SS&ES	0.25	50	50	ENSMUST00000192773.6	ENSMUSG00000028078.15	Dclk2	chr3	protein_coding	doublecortin-like kinase 2
chr3	86695941	86699298	-	86695941	86699376	A5SS	0.5	50	50	ENSMUST00000192773.6	ENSMUSG00000028078.15	Dclk2	chr3	protein_coding	doublecortin-like kinase 2
chr3	86694719;86696797	86696619;86699302	-	86694719	86699302	cassetteExon	0.5	100	100	ENSMUST00000029719.14	ENSMUSG00000028078.15	Dclk2	chr3	protein_coding	doublecortin-like kinase 2
chr3	86694719;86696797	86696716;86699302	-	86694719	86699302	cassetteExon	0.5	100	100	ENSMUST00000029719.14	ENSMUSG00000028078.15	Dclk2	chr3	protein_coding	doublecortin-like kinase 2
chr3	86694719;86696937	86696619;86699302	-	86694719	86699302	cassetteExon	0.5	100	100	ENSMUST00000029719.14	ENSMUSG00000028078.15	Dclk2	chr3	protein_coding	doublecortin-like kinase 2
chr3	86694719;86696937	86696716;86699302	-	86694719	86699302	cassetteExon	0.5	100	100	ENSMUST00000029719.14	ENSMUSG00000028078.15	Dclk2	chr3	protein_coding	doublecortin-like kinase 2
chr3	86699418	86705197	-	86699418	86700526	A5SS&ES	0.25	50	50	ENSMUST00000029719.14	ENSMUSG00000028078.15	Dclk2	chr3	protein_coding	doublecortin-like kinase 2
chr3	86696797	86699302	-	86696797;86696937	86696895;86699302	ES	0.33	50	50	ENSMUST00000192260.2	ENSMUSG00000028078.15	Dclk2	chr3	protein_coding	doublecortin-like kinase 2
chr3	86694719	86696716	-	86694719	86696619	A5SS	0.25	50	50	ENSMUST00000192260.2	ENSMUSG00000028078.15	Dclk2	chr3	protein_coding	doublecortin-like kinase 2
chr3	86699418	86700526	-	86699418	86706318	A5SS	0.25	50	50	ENSMUST00000193400.6	ENSMUSG00000028078.15	Dclk2	chr3	protein_coding	doublecortin-like kinase 2
chr3	86699418	86705197	-	86699418	86706318	A5SS	0.25	50	50	ENSMUST00000193400.6	ENSMUSG00000028078.15	Dclk2	chr3	protein_coding	doublecortin-like kinase 2
chr3	86694719	86699302	-	86696797	86699302	3pMXE	0.33	50	50	ENSMUST00000193769.2	ENSMUSG00000028078.15	Dclk2	chr3	protein_coding	doublecortin-like kinase 2
chr3	86894453	86894850	+	86894567	86894850	A5SS	0.5	50	50	ENSMUST00000194208.6	ENSMUSG00000041750.14	Cd1d2	chr3	polymorphic_pseudogene	CD1d2 antigen
chr3	86904923	86905379	-	86904923	86906054	A5SS	0.5	50	50	ENSMUST00000063869.11	ENSMUSG00000028076.13	Cd1d1	chr3	protein_coding	CD1d1 antigen
chr3	87048429	87081703	-	87048426	87081703	A3SS	0.5	50	50	ENSMUST00000159976.8	ENSMUSG00000041734.16	Kirrel	chr3	protein_coding	kirre like nephrin family adhesion molecule 1
chr3	87283832	87289068	+	87283832;87288691	87288632;87289068	ES	0.5	50	50	ENSMUST00000163661.8	ENSMUSG00000059994.11	Fcrl1	chr3	protein_coding	Fc receptor-like 1
chr3	87292622	87294053	+	87292622;87293086	87292958;87294053	ES	0.5	50	50	ENSMUST00000163661.8	ENSMUSG00000059994.11	Fcrl1	chr3	protein_coding	Fc receptor-like 1
chr3	87297568	87308516	+	87297568	87298521	3pMXE	0.5	50	50	ENSMUST00000163661.8	ENSMUSG00000059994.11	Fcrl1	chr3	protein_coding	Fc receptor-like 1
chr3	87292622	87298778	+	87292622	87292958	A3SS&ES	0.33	50	50	ENSMUST00000163661.8	ENSMUSG00000059994.11	Fcrl1	chr3	protein_coding	Fc receptor-like 1
chr3	87292622	87298778	+	87292622	87294053	A3SS&ES	0.33	50	50	ENSMUST00000167200.7	ENSMUSG00000059994.11	Fcrl1	chr3	protein_coding	Fc receptor-like 1
chr3	87347515	87350841	+	87347515;87349575	87349312;87350841	ES	0.5	50	50	ENSMUST00000194102.6	ENSMUSG00000048031.16	Fcrl5	chr3	protein_coding	Fc receptor-like 5
chr3	87365160	87406976	+	87365160	87374302	3pMXE	0.5	50	50	ENSMUST00000194102.6	ENSMUSG00000048031.16	Fcrl5	chr3	protein_coding	Fc receptor-like 5
chr3	87343255	87349291	+	87343255	87347495	A3SS&ES	0.5	50	50	ENSMUST00000194102.6	ENSMUSG00000048031.16	Fcrl5	chr3	protein_coding	Fc receptor-like 5
chr3	87343255;87349575	87349291;87350841	+	87343255;87347515	87347495;87350841	MXE	0.5	100	100	ENSMUST00000193229.6	ENSMUSG00000048031.16	Fcrl5	chr3	protein_coding	Fc receptor-like 5
chr3	87432966	87434565	+	87432966	87434568	A3SS	0.5	50	50	ENSMUST00000119109.8	ENSMUSG00000003382.19	Etv3	chr3	protein_coding	ets variant 3
chr3	87459006	87462024	+	87457542	87462024	A5SS	0.5	50	50	ENSMUST00000238894.2	ENSMUSG00000118505.2	Etv3l	chr3	protein_coding	ets variant 3-like
chr3	87596157	87604652	+	87596157;87602824	87602705;87604652	ES	0.5	50	50	ENSMUST00000136072.8	ENSMUSG00000041977.19	Arhgef11	chr3	protein_coding	Rho guanine nucleotide exchange factor (GEF) 11
chr3	87526099;87589199	87589167;87590793	+	87526099	87590793	cassetteExon	0.5	100	100	ENSMUST00000136072.8	ENSMUSG00000041977.19	Arhgef11	chr3	protein_coding	Rho guanine nucleotide exchange factor (GEF) 11
chr3	87624827	87632786	+	87624827;87629790	87629664;87632786	ES	0.5	50	50	ENSMUST00000039476.15	ENSMUSG00000041977.19	Arhgef11	chr3	protein_coding	Rho guanine nucleotide exchange factor (GEF) 11
chr3	87624827;87625565	87625536;87629664	+	87624827	87629664	cassetteExon	0.5	100	100	ENSMUST00000039476.15	ENSMUSG00000041977.19	Arhgef11	chr3	protein_coding	Rho guanine nucleotide exchange factor (GEF) 11
chr3	87616969	87617958	+	87616969	87618807	A3SS	0.5	50	50	ENSMUST00000039476.15	ENSMUSG00000041977.19	Arhgef11	chr3	protein_coding	Rho guanine nucleotide exchange factor (GEF) 11
chr3	87624481	87624728	+	87624481	87624731	A3SS	0.5	50	50	ENSMUST00000039476.15	ENSMUSG00000041977.19	Arhgef11	chr3	protein_coding	Rho guanine nucleotide exchange factor (GEF) 11
chr3	87624827	87625536	+	87624827	87632786	A3SS	0.33	50	50	ENSMUST00000152006.2	ENSMUSG00000041977.19	Arhgef11	chr3	protein_coding	Rho guanine nucleotide exchange factor (GEF) 11
chr3	87647250	87648282	-	87647253	87648282	A3SS	0.33	50	50	ENSMUST00000023846.11	ENSMUSG00000023084.12	Lrrc71	chr3	protein_coding	leucine rich repeat containing 71
chr3	87647370	87648282	-	87647253	87648282	A3SS	0.33	50	50	ENSMUST00000023846.11	ENSMUSG00000023084.12	Lrrc71	chr3	protein_coding	leucine rich repeat containing 71
chr3	87647250;87647370	87647329;87648282	-	87647250	87648282	cassetteExon	0.5	100	100	ENSMUST00000174381.8	ENSMUSG00000023084.12	Lrrc71	chr3	protein_coding	leucine rich repeat containing 71
chr3	87659080	87659414	-	87659080;87659249	87659161;87659414	ES	0.5	50	50	ENSMUST00000174267.8	ENSMUSG00000028073.16	Pear1	chr3	protein_coding	platelet endothelial aggregation receptor 1
chr3	87666888;87669588	87669519;87676185	-	87666888;87667692	87667531;87676185	MXE	0.5	100	100	ENSMUST00000174267.8	ENSMUSG00000028073.16	Pear1	chr3	protein_coding	platelet endothelial aggregation receptor 1
chr3	87667692;87669588	87669519;87676185	-	87667692	87676185	cassetteExon	0.5	100	100	ENSMUST00000174267.8	ENSMUSG00000028073.16	Pear1	chr3	protein_coding	platelet endothelial aggregation receptor 1
chr3	87667692;87670665	87670567;87676185	-	87667692	87676185	cassetteExon	0.5	100	100	ENSMUST00000174267.8	ENSMUSG00000028073.16	Pear1	chr3	protein_coding	platelet endothelial aggregation receptor 1
chr3	87665853	87666401	-	87665724	87666401	A3SS	0.5	50	50	ENSMUST00000174267.8	ENSMUSG00000028073.16	Pear1	chr3	protein_coding	platelet endothelial aggregation receptor 1
chr3	87666501	87666784	-	87666473	87666784	A3SS	0.5	50	50	ENSMUST00000174267.8	ENSMUSG00000028073.16	Pear1	chr3	protein_coding	platelet endothelial aggregation receptor 1
chr3	87661201	87661774	-	87661201	87661371	A5SS&ES	0.5	50	50	ENSMUST00000174267.8	ENSMUSG00000028073.16	Pear1	chr3	protein_coding	platelet endothelial aggregation receptor 1
chr3	87664571	87665067	-	87664571	87665234	A5SS	0.5	50	50	ENSMUST00000174267.8	ENSMUSG00000028073.16	Pear1	chr3	protein_coding	platelet endothelial aggregation receptor 1
chr3	87666501	87666660	-	87666501	87666784	A5SS	0.5	50	50	ENSMUST00000079083.12	ENSMUSG00000028073.16	Pear1	chr3	protein_coding	platelet endothelial aggregation receptor 1
chr3	87666888	87669519	-	87666888	87667531	A5SS&ES	0.5	50	50	ENSMUST00000029714.15	ENSMUSG00000028073.16	Pear1	chr3	protein_coding	platelet endothelial aggregation receptor 1
chr3	87666888	87669519	-	87666888;87667692	87667531;87669519	ES	0.5	50	50	ENSMUST00000172631.8	ENSMUSG00000028073.16	Pear1	chr3	protein_coding	platelet endothelial aggregation receptor 1
chr3	87667692	87670567	-	87667692	87669519	5pMXE	0.33	50	50	ENSMUST00000172631.8	ENSMUSG00000028073.16	Pear1	chr3	protein_coding	platelet endothelial aggregation receptor 1
chr3	87667692	87676185	-	87667692	87669519	5pMXE	0.33	50	50	ENSMUST00000172631.8	ENSMUSG00000028073.16	Pear1	chr3	protein_coding	platelet endothelial aggregation receptor 1
chr3	87659080	87659414	-	87659080	87659161	A5SS	0.5	50	50	ENSMUST00000172631.8	ENSMUSG00000028073.16	Pear1	chr3	protein_coding	platelet endothelial aggregation receptor 1
chr3	87669588	87676185	-	87669588;87670665	87670532;87676185	ES	0.33	50	50	ENSMUST00000172621.8	ENSMUSG00000028073.16	Pear1	chr3	protein_coding	platelet endothelial aggregation receptor 1
chr3	87669588	87670567	-	87669588	87670532	A5SS	0.33	50	50	ENSMUST00000172621.8	ENSMUSG00000028073.16	Pear1	chr3	protein_coding	platelet endothelial aggregation receptor 1
chr3	87667692;87670665	87670567;87676185	-	87667692;87669588	87669519;87676185	MXE	0.5	100	100	ENSMUST00000174759.8	ENSMUSG00000028073.16	Pear1	chr3	protein_coding	platelet endothelial aggregation receptor 1
chr3	87669588;87670665	87670567;87676185	-	87669588	87676185	cassetteExon	0.5	100	100	ENSMUST00000174759.8	ENSMUSG00000028073.16	Pear1	chr3	protein_coding	platelet endothelial aggregation receptor 1
chr3	87667692	87670567	-	87667692;87669588	87669519;87670567	ES	0.5	50	50	ENSMUST00000174776.8	ENSMUSG00000028073.16	Pear1	chr3	protein_coding	platelet endothelial aggregation receptor 1
chr3	87666888;87669588	87669519;87670567	-	87666888;87667692	87667531;87670567	MXE	0.5	100	100	ENSMUST00000173184.2	ENSMUSG00000028073.16	Pear1	chr3	protein_coding	platelet endothelial aggregation receptor 1
chr3	87666888;87669588	87669519;87676185	-	87666888;87670665	87667531;87676185	MXE	0.5	100	100	ENSMUST00000173184.2	ENSMUSG00000028073.16	Pear1	chr3	protein_coding	platelet endothelial aggregation receptor 1
chr3	87709281	87709686	+	87708196	87709686	A5SS	0.5	50	50	ENSMUST00000029711.9	ENSMUSG00000005640.12	Insrr	chr3	protein_coding	insulin receptor-related receptor
chr3	87759158	87759374	+	87759182	87759374	A5SS	0.5	50	50	ENSMUST00000107581.9	ENSMUSG00000028071.13	Sh2d2a	chr3	protein_coding	SH2 domain containing 2A
chr3	87820758;87821217	87821148;87821359	+	87820758	87821359	cassetteExon	0.5	100	100	ENSMUST00000005017.15	ENSMUSG00000004897.17	Hdgf	chr3	protein_coding	heparin binding growth factor
chr3	87814472	87820398	+	87814021	87820398	A5SS	0.25	50	50	ENSMUST00000005017.15	ENSMUSG00000004897.17	Hdgf	chr3	protein_coding	heparin binding growth factor
chr3	87814874	87820398	+	87814021	87820398	A5SS	0.25	50	50	ENSMUST00000005017.15	ENSMUSG00000004897.17	Hdgf	chr3	protein_coding	heparin binding growth factor
chr3	87817370	87820398	+	87814021	87820398	A5SS	0.25	50	50	ENSMUST00000005017.15	ENSMUSG00000004897.17	Hdgf	chr3	protein_coding	heparin binding growth factor
chr3	87814874	87820398	+	87814472	87820398	A5SS	0.25	50	50	ENSMUST00000159492.8	ENSMUSG00000004897.17	Hdgf	chr3	protein_coding	heparin binding growth factor
chr3	87817370	87820398	+	87814472	87820398	A5SS	0.25	50	50	ENSMUST00000159492.8	ENSMUSG00000004897.17	Hdgf	chr3	protein_coding	heparin binding growth factor
chr3	87817370	87820398	+	87814874	87820398	A5SS	0.25	50	50	ENSMUST00000161616.8	ENSMUSG00000004897.17	Hdgf	chr3	protein_coding	heparin binding growth factor
chr3	87826958	87829124	+	87827135	87829124	A5SS	0.33	50	50	ENSMUST00000119968.8	ENSMUSG00000019710.14	Mrpl24	chr3	protein_coding	mitochondrial ribosomal protein L24
chr3	87827012	87829124	+	87827135	87829124	A5SS	0.33	50	50	ENSMUST00000119968.8	ENSMUSG00000019710.14	Mrpl24	chr3	protein_coding	mitochondrial ribosomal protein L24
chr3	87827012;87827135	87827110;87829124	+	87827012	87829124	cassetteExon	0.5	100	100	ENSMUST00000019854.13	ENSMUSG00000019710.14	Mrpl24	chr3	protein_coding	mitochondrial ribosomal protein L24
chr3	87826958	87829124	+	87827012	87829124	A5SS	0.33	50	50	ENSMUST00000019854.13	ENSMUSG00000019710.14	Mrpl24	chr3	protein_coding	mitochondrial ribosomal protein L24
chr3	87826958	87827110	+	87827012	87827110	A5SS	0.5	50	50	ENSMUST00000137775.2	ENSMUSG00000019710.14	Mrpl24	chr3	protein_coding	mitochondrial ribosomal protein L24
chr3	87826958	87829124	+	87826958	87827110	3pMXE	0.5	50	50	ENSMUST00000152287.2	ENSMUSG00000019710.14	Mrpl24	chr3	protein_coding	mitochondrial ribosomal protein L24
chr3	87826958;87827135	87827110;87829124	+	87826958	87829124	cassetteExon	0.5	100	100	ENSMUST00000121920.8	ENSMUSG00000019710.14	Mrpl24	chr3	protein_coding	mitochondrial ribosomal protein L24
chr3	87834181	87834870	-	87834181;87834424	87834362;87834870	ES	0.5	50	50	ENSMUST00000160648.8	ENSMUSG00000004896.17	Rrnad1	chr3	protein_coding	ribosomal RNA adenine dimethylase domain containing 1
chr3	87835355	87837751	-	87835355	87837163	5pMXE	0.33	50	50	ENSMUST00000160648.8	ENSMUSG00000004896.17	Rrnad1	chr3	protein_coding	ribosomal RNA adenine dimethylase domain containing 1
chr3	87831835	87834038	-	87832738	87834038	A3SS	0.5	50	50	ENSMUST00000160648.8	ENSMUSG00000004896.17	Rrnad1	chr3	protein_coding	ribosomal RNA adenine dimethylase domain containing 1
chr3	87835062	87835231	-	87835022	87835231	A3SS	0.5	50	50	ENSMUST00000160648.8	ENSMUSG00000004896.17	Rrnad1	chr3	protein_coding	ribosomal RNA adenine dimethylase domain containing 1
chr3	87835355	87837355	-	87835355	87837163	A5SS	0.33	50	50	ENSMUST00000160648.8	ENSMUSG00000004896.17	Rrnad1	chr3	protein_coding	ribosomal RNA adenine dimethylase domain containing 1
chr3	87831835	87834038	-	87831835;87832738	87832254;87834038	ES	0.5	50	50	ENSMUST00000005016.16	ENSMUSG00000004896.17	Rrnad1	chr3	protein_coding	ribosomal RNA adenine dimethylase domain containing 1
chr3	87831835	87832199	-	87831835	87832254	A5SS	0.33	50	50	ENSMUST00000005016.16	ENSMUSG00000004896.17	Rrnad1	chr3	protein_coding	ribosomal RNA adenine dimethylase domain containing 1
chr3	87834181	87834870	-	87834424	87834870	A3SS	0.5	50	50	ENSMUST00000168070.2	ENSMUSG00000004896.17	Rrnad1	chr3	protein_coding	ribosomal RNA adenine dimethylase domain containing 1
chr3	87831835	87834038	-	87831835	87832199	5pMXE	0.33	50	50	ENSMUST00000160068.2	ENSMUSG00000004896.17	Rrnad1	chr3	protein_coding	ribosomal RNA adenine dimethylase domain containing 1
chr3	87835355	87837355	-	87835355	87837751	A5SS	0.33	50	50	ENSMUST00000161014.2	ENSMUSG00000004896.17	Rrnad1	chr3	protein_coding	ribosomal RNA adenine dimethylase domain containing 1
chr3	87902765	87903425	-	87903010	87903425	A3SS	0.5	50	50	ENSMUST00000090971.11	ENSMUSG00000004892.14	Bcan	chr3	protein_coding	brevican
chr3	87905162	87906896	-	87905162	87907410	A5SS	0.5	50	50	ENSMUST00000090971.11	ENSMUSG00000004892.14	Bcan	chr3	protein_coding	brevican
chr3	87931316	87931637	-	87931425	87931637	A3SS	0.5	50	50	ENSMUST00000005014.9	ENSMUSG00000004894.11	Hapln2	chr3	protein_coding	hyaluronan and proteoglycan link protein 2
chr3	87950486;87950908	87950774;87958469	+	87950486	87958469	cassetteExon	0.5	100	100	ENSMUST00000029707.13	ENSMUSG00000028069.17	Gpatch4	chr3	protein_coding	G patch domain containing 4
chr3	87950486;87951100	87950774;87958469	+	87950486	87958469	cassetteExon	0.5	100	100	ENSMUST00000029707.13	ENSMUSG00000028069.17	Gpatch4	chr3	protein_coding	G patch domain containing 4
chr3	87951100	87958469	+	87950908	87958469	A5SS	0.33	50	50	ENSMUST00000166021.8	ENSMUSG00000028069.17	Gpatch4	chr3	protein_coding	G patch domain containing 4
chr3	87950486	87958469	+	87951100	87958469	A5SS	0.33	50	50	ENSMUST00000193398.2	ENSMUSG00000028069.17	Gpatch4	chr3	protein_coding	G patch domain containing 4
chr3	87978653	87979268	-	87978653	87979614	A5SS	0.5	50	50	ENSMUST00000238487.2	ENSMUSG00000051036.14	Ttc24	chr3	protein_coding	tetratricopeptide repeat domain 24
chr3	88012577	88014819	+	88011842	88014819	A5SS	0.5	50	50	ENSMUST00000071812.11	ENSMUSG00000028068.15	Iqgap3	chr3	protein_coding	IQ motif containing GTPase activating protein 3
chr3	88075041	88075939	+	88075041;88075651	88075345;88075939	ES	0.33	50	50	ENSMUST00000001455.13	ENSMUSG00000001419.18	Mef2d	chr3	protein_coding	myocyte enhancer factor 2D
chr3	88063832;88065662	88065528;88066429	+	88063832;88065478	88065341;88066429	MXE	0.5	100	100	ENSMUST00000001455.13	ENSMUSG00000001419.18	Mef2d	chr3	protein_coding	myocyte enhancer factor 2D
chr3	88068688;88069108	88069088;88070265	+	88068688	88070265	cassetteExon	0.5	100	100	ENSMUST00000001455.13	ENSMUSG00000001419.18	Mef2d	chr3	protein_coding	myocyte enhancer factor 2D
chr3	88075765	88075939	+	88075651	88075939	A5SS	0.33	50	50	ENSMUST00000001455.13	ENSMUSG00000001419.18	Mef2d	chr3	protein_coding	myocyte enhancer factor 2D
chr3	88075041	88075939	+	88075041	88075345	A3SS	0.5	50	50	ENSMUST00000119251.8	ENSMUSG00000001419.18	Mef2d	chr3	protein_coding	myocyte enhancer factor 2D
chr3	88075041;88075765	88075345;88075939	+	88075041	88075939	cassetteExon	0.5	100	100	ENSMUST00000139153.2	ENSMUSG00000001419.18	Mef2d	chr3	protein_coding	myocyte enhancer factor 2D
chr3	88075041	88075939	+	88075765	88075939	5pMXE	0.33	50	50	ENSMUST00000152861.2	ENSMUSG00000001419.18	Mef2d	chr3	protein_coding	myocyte enhancer factor 2D
chr3	88079565	88083050	-	88079565	88083158	A5SS	0.5	50	50	ENSMUST00000197172.5	ENSMUSG00000096935.6	1700113A16Rik	chr3	lncRNA	RIKEN cDNA 1700113A16 gene
chr3	88108536	88110400	+	88108536	88108817	A3SS	0.5	50	50	ENSMUST00000181406.2	ENSMUSG00000097428.2	AW047730	chr3	lncRNA	expressed sequence AW047730
chr3	88131742	88133251	+	88131742	88132699	3pMXE	0.5	50	50	ENSMUST00000181550.8	ENSMUSG00000097156.8	Gm3764	chr3	lncRNA	predicted gene 3764
chr3	88117023;88128357	88128263;88131575	+	88117023;88130361	88128410;88131575	MXE	0.5	100	100	ENSMUST00000181550.8	ENSMUSG00000097156.8	Gm3764	chr3	lncRNA	predicted gene 3764
chr3	88128591	88131572	+	88128591	88130277	A3SS&ES	0.5	50	50	ENSMUST00000181550.8	ENSMUSG00000097156.8	Gm3764	chr3	lncRNA	predicted gene 3764
chr3	88121974	88128410	+	88117023	88128410	A5SS	0.5	50	50	ENSMUST00000181550.8	ENSMUSG00000097156.8	Gm3764	chr3	lncRNA	predicted gene 3764
chr3	88117023	88128410	+	88117023	88128263	A3SS&ES	0.5	50	50	ENSMUST00000180582.8	ENSMUSG00000097156.8	Gm3764	chr3	lncRNA	predicted gene 3764
chr3	88121974	88128263	+	88117023	88128263	A5SS	0.5	50	50	ENSMUST00000180582.8	ENSMUSG00000097156.8	Gm3764	chr3	lncRNA	predicted gene 3764
chr3	88130361	88131575	+	88128357	88131575	A5SS	0.5	50	50	ENSMUST00000180582.8	ENSMUSG00000097156.8	Gm3764	chr3	lncRNA	predicted gene 3764
chr3	88121974	88128410	+	88121974	88128263	A3SS	0.5	50	50	ENSMUST00000181356.2	ENSMUSG00000097156.8	Gm3764	chr3	lncRNA	predicted gene 3764
chr3	88121974;88128357	88128263;88131575	+	88121974;88130361	88128410;88131575	MXE	0.5	100	100	ENSMUST00000181396.8	ENSMUSG00000097156.8	Gm3764	chr3	lncRNA	predicted gene 3764
chr3	88136007	88136319	+	88134975	88136319	A5SS	0.5	50	50	ENSMUST00000180635.8	ENSMUSG00000097156.8	Gm3764	chr3	lncRNA	predicted gene 3764
chr3	88155770	88187239	-	88155770	88161776	5pMXE	0.33	50	50	ENSMUST00000171887.4	ENSMUSG00000104445.2	Rhbg	chr3	protein_coding	Rhesus blood group-associated B glycoprotein
chr3	88155770	88194405	-	88155770	88161776	5pMXE	0.33	50	50	ENSMUST00000171887.4	ENSMUSG00000104445.2	Rhbg	chr3	protein_coding	Rhesus blood group-associated B glycoprotein
chr3	88155770;88187459	88187239;88194405	-	88155770	88194405	cassetteExon	0.5	100	100	ENSMUST00000165196.8	ENSMUSG00000103766.6	Gm38392	chr3	protein_coding	predicted gene, 38392
chr3	88190291	88194405	-	88155770	88194405	A3SS	0.33	50	50	ENSMUST00000165196.8	ENSMUSG00000103766.6	Gm38392	chr3	protein_coding	predicted gene, 38392
chr3	88190291	88194405	-	88187459	88194405	A3SS	0.33	50	50	ENSMUST00000163277.2	ENSMUSG00000103766.6	Gm38392	chr3	protein_coding	predicted gene, 38392
chr3	88202757	88204070	-	88202757	88204131	A5SS	0.5	50	50	ENSMUST00000107556.10	ENSMUSG00000010538.15	Tsacc	chr3	protein_coding	TSSK6 activating co-chaperone
chr3	88216654	88220549	+	88216654;88219129	88218980;88220549	ES	0.5	50	50	ENSMUST00000001452.14	ENSMUSG00000001416.14	Cct3	chr3	protein_coding	chaperonin containing Tcp1, subunit 3 (gamma)
chr3	88228452;88228670	88228617;88228751	+	88228452	88228751	cassetteExon	0.5	100	100	ENSMUST00000001452.14	ENSMUSG00000001416.14	Cct3	chr3	protein_coding	chaperonin containing Tcp1, subunit 3 (gamma)
chr3	88219129	88220398	+	88219129	88220549	A3SS	0.5	50	50	ENSMUST00000001452.14	ENSMUSG00000001416.14	Cct3	chr3	protein_coding	chaperonin containing Tcp1, subunit 3 (gamma)
chr3	88216654	88220549	+	88216654	88218980	A3SS&ES	0.5	50	50	ENSMUST00000167000.8	ENSMUSG00000001416.14	Cct3	chr3	protein_coding	chaperonin containing Tcp1, subunit 3 (gamma)
chr3	88206710	88210075	+	88208298	88210075	A5SS	0.5	50	50	ENSMUST00000167000.8	ENSMUSG00000001416.14	Cct3	chr3	protein_coding	chaperonin containing Tcp1, subunit 3 (gamma)
chr3	88206710	88210075	+	88206710;88208298	88208107;88210075	ES	0.5	50	50	ENSMUST00000164783.8	ENSMUSG00000001416.14	Cct3	chr3	protein_coding	chaperonin containing Tcp1, subunit 3 (gamma)
chr3	88232508	88233422	+	88232508;88233238	88232984;88233422	ES	0.33	50	50	ENSMUST00000177005.8	ENSMUSG00000001418.14	Glmp	chr3	protein_coding	glycosylated lysosomal membrane protein
chr3	88233238	88233718	+	88233238;88233619	88233422;88233718	ES	0.5	50	50	ENSMUST00000177005.8	ENSMUSG00000001418.14	Glmp	chr3	protein_coding	glycosylated lysosomal membrane protein
chr3	88233238	88235599	+	88233238	88233422	A3SS&ES	0.33	50	50	ENSMUST00000177005.8	ENSMUSG00000001418.14	Glmp	chr3	protein_coding	glycosylated lysosomal membrane protein
chr3	88235420	88235483	+	88235420	88235510	A3SS	0.5	50	50	ENSMUST00000177005.8	ENSMUSG00000001418.14	Glmp	chr3	protein_coding	glycosylated lysosomal membrane protein
chr3	88233322	88233422	+	88233238	88233422	A5SS	0.33	50	50	ENSMUST00000177005.8	ENSMUSG00000001418.14	Glmp	chr3	protein_coding	glycosylated lysosomal membrane protein
chr3	88232508	88233238	+	88232508	88232984	A3SS	0.33	50	50	ENSMUST00000153716.2	ENSMUSG00000001418.14	Glmp	chr3	protein_coding	glycosylated lysosomal membrane protein
chr3	88232508	88233422	+	88232508	88232984	A3SS	0.33	50	50	ENSMUST00000153716.2	ENSMUSG00000001418.14	Glmp	chr3	protein_coding	glycosylated lysosomal membrane protein
chr3	88233238	88233718	+	88233619	88233718	A5SS	0.5	50	50	ENSMUST00000153716.2	ENSMUSG00000001418.14	Glmp	chr3	protein_coding	glycosylated lysosomal membrane protein
chr3	88232508	88233422	+	88232508;88233322	88233238;88233422	ES	0.33	50	50	ENSMUST00000131666.2	ENSMUSG00000001418.14	Glmp	chr3	protein_coding	glycosylated lysosomal membrane protein
chr3	88233238	88233718	+	88233238	88235599	A3SS	0.33	50	50	ENSMUST00000176519.8	ENSMUSG00000001418.14	Glmp	chr3	protein_coding	glycosylated lysosomal membrane protein
chr3	88232508;88233619	88233422;88233718	+	88232508;88233238	88232984;88233718	MXE	0.5	100	100	ENSMUST00000001454.14	ENSMUSG00000001418.14	Glmp	chr3	protein_coding	glycosylated lysosomal membrane protein
chr3	88232508;88233322	88232984;88233422	+	88232508	88233422	cassetteExon	0.5	100	100	ENSMUST00000176425.2	ENSMUSG00000001418.14	Glmp	chr3	protein_coding	glycosylated lysosomal membrane protein
chr3	88240989	88243210	-	88240989	88241689	5pMXE	0.33	50	50	ENSMUST00000001456.11	ENSMUSG00000001420.14	Tmem79	chr3	protein_coding	transmembrane protein 79
chr3	88241088	88241689	-	88240989	88241689	A3SS	0.5	50	50	ENSMUST00000001456.11	ENSMUSG00000001420.14	Tmem79	chr3	protein_coding	transmembrane protein 79
chr3	88240989	88241415	-	88240989	88241689	A5SS	0.33	50	50	ENSMUST00000001456.11	ENSMUSG00000001420.14	Tmem79	chr3	protein_coding	transmembrane protein 79
chr3	88240989	88243210	-	88240989	88241415	5pMXE	0.33	50	50	ENSMUST00000107553.8	ENSMUSG00000001420.14	Tmem79	chr3	protein_coding	transmembrane protein 79
chr3	88254903	88256418	+	88254903	88256449	A3SS	0.5	50	50	ENSMUST00000001451.11	ENSMUSG00000001415.11	Smg5	chr3	protein_coding	Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)
chr3	88248165	88249165	+	88243804	88249165	A5SS	0.5	50	50	ENSMUST00000001451.11	ENSMUSG00000001415.11	Smg5	chr3	protein_coding	Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)
chr3	88265715	88265960	+	88263043	88265960	A5SS	0.5	50	50	ENSMUST00000001451.11	ENSMUSG00000001415.11	Smg5	chr3	protein_coding	Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)
chr3	88272410;88272609	88272534;88272982	+	88272410	88272982	cassetteExon	0.5	100	100	ENSMUST00000147948.8	ENSMUSG00000041423.17	Paqr6	chr3	protein_coding	progestin and adipoQ receptor family member VI
chr3	88273109;88273593	88273189;88274212	+	88273109	88274212	cassetteExon	0.5	100	100	ENSMUST00000147948.8	ENSMUSG00000041423.17	Paqr6	chr3	protein_coding	progestin and adipoQ receptor family member VI
chr3	88301877;88303117	88303021;88303212	-	88301877	88303212	cassetteExon	0.5	100	100	ENSMUST00000193338.6	ENSMUSG00000028066.16	Pmf1	chr3	protein_coding	polyamine-modulated factor 1
chr3	88307123	88317463	-	88303407	88317463	A3SS	0.5	50	50	ENSMUST00000193338.6	ENSMUSG00000028066.16	Pmf1	chr3	protein_coding	polyamine-modulated factor 1
chr3	88303407	88306442	-	88303407	88317463	A5SS	0.5	50	50	ENSMUST00000193338.6	ENSMUSG00000028066.16	Pmf1	chr3	protein_coding	polyamine-modulated factor 1
chr3	88306611	88307018	-	88306542	88307018	A3SS	0.5	50	50	ENSMUST00000056370.13	ENSMUSG00000028066.16	Pmf1	chr3	protein_coding	polyamine-modulated factor 1
chr3	88320204;88323422	88323295;88327808	-	88320204	88327808	cassetteExon	0.5	100	100	ENSMUST00000168755.7	ENSMUSG00000050144.14	Slc25a44	chr3	protein_coding	solute carrier family 25, member 44
chr3	88328445	88332081	-	88328445	88332035	A5SS	0.33	50	50	ENSMUST00000168755.7	ENSMUSG00000050144.14	Slc25a44	chr3	protein_coding	solute carrier family 25, member 44
chr3	88328445	88332153	-	88328445	88332035	A5SS	0.33	50	50	ENSMUST00000168755.7	ENSMUSG00000050144.14	Slc25a44	chr3	protein_coding	solute carrier family 25, member 44
chr3	88328445	88332081	-	88328445	88332153	A5SS	0.33	50	50	ENSMUST00000193433.6	ENSMUSG00000050144.14	Slc25a44	chr3	protein_coding	solute carrier family 25, member 44
chr3	88358757	88359327	-	88358757;88359093	88358995;88359327	ES	0.5	50	50	ENSMUST00000029700.12	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88362153	88363441	-	88362153	88362855	5pMXE	0.14	50	50	ENSMUST00000029700.12	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88362153	88366118	-	88362153	88362855	5pMXE	0.14	50	50	ENSMUST00000029700.12	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88362153	88366294	-	88362153	88362855	5pMXE	0.14	50	50	ENSMUST00000029700.12	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88362153	88368454	-	88362153	88362855	5pMXE	0.14	50	50	ENSMUST00000029700.12	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88357934;88358253	88358070;88358652	-	88357934	88358652	cassetteExon	0.5	100	100	ENSMUST00000029700.12	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88358774	88358995	-	88358757	88358995	A3SS	0.33	50	50	ENSMUST00000029700.12	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88358804	88358995	-	88358757	88358995	A3SS	0.33	50	50	ENSMUST00000029700.12	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88360438	88362851	-	88360438	88361986	A5SS&ES	0.5	50	50	ENSMUST00000029700.12	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88362153	88362387	-	88362153	88362855	A5SS	0.14	50	50	ENSMUST00000029700.12	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88362153	88362565	-	88362153	88362855	A5SS	0.14	50	50	ENSMUST00000029700.12	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88362153	88366294	-	88362153	88366118	5pMXE	0.14	50	50	ENSMUST00000169222.8	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88362153	88368454	-	88362153	88366118	5pMXE	0.14	50	50	ENSMUST00000169222.8	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88362153	88362387	-	88362153	88366118	A5SS	0.14	50	50	ENSMUST00000169222.8	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88362153	88362565	-	88362153	88366118	A5SS	0.14	50	50	ENSMUST00000169222.8	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88362153	88363441	-	88362153	88366118	A5SS	0.14	50	50	ENSMUST00000169222.8	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88362153	88368454	-	88362153	88366294	5pMXE	0.14	50	50	ENSMUST00000165898.8	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88362153	88362387	-	88362153	88366294	A5SS	0.14	50	50	ENSMUST00000165898.8	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88362153	88362565	-	88362153	88366294	A5SS	0.14	50	50	ENSMUST00000165898.8	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88362153	88363441	-	88362153	88366294	A5SS	0.14	50	50	ENSMUST00000165898.8	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88362153	88362387	-	88362153	88368454	A5SS	0.14	50	50	ENSMUST00000166237.8	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88362153	88362565	-	88362153	88368454	A5SS	0.14	50	50	ENSMUST00000166237.8	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88362153	88363441	-	88362153	88368454	A5SS	0.14	50	50	ENSMUST00000166237.8	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88362153	88363441	-	88362153	88362565	5pMXE	0.14	50	50	ENSMUST00000184487.8	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88358757	88359327	-	88359093	88359327	A3SS&ES	0.5	50	50	ENSMUST00000184487.8	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88358804	88358995	-	88358774	88358995	A3SS	0.33	50	50	ENSMUST00000184487.8	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88362153	88362387	-	88362153	88362565	A5SS	0.14	50	50	ENSMUST00000184487.8	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88362153	88363441	-	88362153;88362991	88362855;88363441	ES	0.33	50	50	ENSMUST00000141471.2	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88363099	88363441	-	88362991	88363441	A3SS	0.33	50	50	ENSMUST00000141471.2	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88362153;88362991	88362565;88363441	-	88362153	88363441	cassetteExon	0.5	100	100	ENSMUST00000123753.8	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88362153;88363099	88362855;88363441	-	88362153	88363441	cassetteExon	0.5	100	100	ENSMUST00000123753.8	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88362153	88362387	-	88362153	88363441	A5SS	0.14	50	50	ENSMUST00000123753.8	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88362153	88363441	-	88363099	88363441	3pMXE	0.33	50	50	ENSMUST00000146921.2	ENSMUSG00000028064.18	Sema4a	chr3	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr3	88395738	88400544	-	88395738	88410055	A5SS	0.5	50	50	ENSMUST00000029699.13	ENSMUSG00000028063.16	Lmna	chr3	protein_coding	lamin A
chr3	88452563;88455075	88454929;88455340	-	88452563	88455340	cassetteExon	0.5	100	100	ENSMUST00000008745.13	ENSMUSG00000008601.13	Rab25	chr3	protein_coding	RAB25, member RAS oncogene family
chr3	88458092	88460037	-	88458092	88459662	A5SS&ES	0.5	50	50	ENSMUST00000029698.15	ENSMUSG00000028062.16	Lamtor2	chr3	protein_coding	late endosomal/lysosomal adaptor, MAPK and MTOR activator 2
chr3	88459824	88460037	-	88459824	88460103	A5SS	0.5	50	50	ENSMUST00000029698.15	ENSMUSG00000028062.16	Lamtor2	chr3	protein_coding	late endosomal/lysosomal adaptor, MAPK and MTOR activator 2
chr3	88458092	88460037	-	88458092;88459824	88459662;88460037	ES	0.5	50	50	ENSMUST00000119002.2	ENSMUSG00000028062.16	Lamtor2	chr3	protein_coding	late endosomal/lysosomal adaptor, MAPK and MTOR activator 2
chr3	88461219	88462709	+	88461219	88462645	A3SS	0.5	50	50	ENSMUST00000008748.8	ENSMUSG00000008604.12	Ubqln4	chr3	protein_coding	ubiquilin 4
chr3	88464226	88466925	+	88464226	88471677	A3SS	0.5	50	50	ENSMUST00000192687.2	ENSMUSG00000008604.12	Ubqln4	chr3	protein_coding	ubiquilin 4
chr3	88470640	88471677	+	88464226	88471677	A5SS	0.5	50	50	ENSMUST00000192687.2	ENSMUSG00000008604.12	Ubqln4	chr3	protein_coding	ubiquilin 4
chr3	88483287;88483688	88483546;88483807	+	88483287	88483807	cassetteExon	0.5	100	100	ENSMUST00000192688.6	ENSMUSG00000041355.14	Ssr2	chr3	protein_coding	signal sequence receptor, beta
chr3	88483910;88484503	88484402;88487187	+	88483910	88487187	cassetteExon	0.5	100	100	ENSMUST00000192688.6	ENSMUSG00000041355.14	Ssr2	chr3	protein_coding	signal sequence receptor, beta
chr3	88486993	88487187	+	88483910	88487187	A5SS	0.33	50	50	ENSMUST00000192688.6	ENSMUSG00000041355.14	Ssr2	chr3	protein_coding	signal sequence receptor, beta
chr3	88486993	88487187	+	88484503	88487187	A5SS	0.33	50	50	ENSMUST00000193069.2	ENSMUSG00000041355.14	Ssr2	chr3	protein_coding	signal sequence receptor, beta
chr3	88483287	88483807	+	88483287	88483546	A3SS	0.5	50	50	ENSMUST00000194604.2	ENSMUSG00000041355.14	Ssr2	chr3	protein_coding	signal sequence receptor, beta
chr3	88488345	88491044	+	88488345	88491107	A3SS	0.5	50	50	ENSMUST00000193934.6	ENSMUSG00000041355.14	Ssr2	chr3	protein_coding	signal sequence receptor, beta
chr3	88523961	88524556	+	88523961	88537094	A3SS	0.5	50	50	ENSMUST00000175903.9	ENSMUSG00000028059.17	Arhgef2	chr3	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 2
chr3	88540349	88540602	+	88540349	88540565	A3SS	0.5	50	50	ENSMUST00000175903.9	ENSMUSG00000028059.17	Arhgef2	chr3	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 2
chr3	88540674	88540807	+	88540674	88540813	A3SS	0.5	50	50	ENSMUST00000175903.9	ENSMUSG00000028059.17	Arhgef2	chr3	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 2
chr3	88547657	88547783	+	88547657	88549733	A3SS	0.5	50	50	ENSMUST00000175903.9	ENSMUSG00000028059.17	Arhgef2	chr3	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 2
chr3	88514887	88515102	+	88513620	88515102	A5SS	0.5	50	50	ENSMUST00000175903.9	ENSMUSG00000028059.17	Arhgef2	chr3	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 2
chr3	88523763	88523868	+	88522828	88523868	A5SS	0.5	50	50	ENSMUST00000175903.9	ENSMUSG00000028059.17	Arhgef2	chr3	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 2
chr3	88528628	88537094	+	88523961	88537094	A5SS	0.14	50	50	ENSMUST00000175903.9	ENSMUSG00000028059.17	Arhgef2	chr3	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 2
chr3	88528906	88537094	+	88523961	88537094	A5SS	0.14	50	50	ENSMUST00000175903.9	ENSMUSG00000028059.17	Arhgef2	chr3	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 2
chr3	88529904	88537094	+	88523961	88537094	A5SS	0.14	50	50	ENSMUST00000175903.9	ENSMUSG00000028059.17	Arhgef2	chr3	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 2
chr3	88530703	88537094	+	88523961	88537094	A5SS	0.14	50	50	ENSMUST00000175903.9	ENSMUSG00000028059.17	Arhgef2	chr3	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 2
chr3	88536870	88537094	+	88523961	88537094	A5SS	0.14	50	50	ENSMUST00000175903.9	ENSMUSG00000028059.17	Arhgef2	chr3	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 2
chr3	88536997	88537094	+	88523961	88537094	A5SS	0.14	50	50	ENSMUST00000175903.9	ENSMUSG00000028059.17	Arhgef2	chr3	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 2
chr3	88539640	88540220	+	88539646	88540220	A5SS	0.5	50	50	ENSMUST00000175903.9	ENSMUSG00000028059.17	Arhgef2	chr3	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 2
chr3	88528906	88537094	+	88528628	88537094	A5SS	0.14	50	50	ENSMUST00000029694.14	ENSMUSG00000028059.17	Arhgef2	chr3	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 2
chr3	88529904	88537094	+	88528628	88537094	A5SS	0.14	50	50	ENSMUST00000029694.14	ENSMUSG00000028059.17	Arhgef2	chr3	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 2
chr3	88530703	88537094	+	88528628	88537094	A5SS	0.14	50	50	ENSMUST00000029694.14	ENSMUSG00000028059.17	Arhgef2	chr3	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 2
chr3	88536870	88537094	+	88528628	88537094	A5SS	0.14	50	50	ENSMUST00000029694.14	ENSMUSG00000028059.17	Arhgef2	chr3	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 2
chr3	88536997	88537094	+	88528628	88537094	A5SS	0.14	50	50	ENSMUST00000029694.14	ENSMUSG00000028059.17	Arhgef2	chr3	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 2
chr3	88529904	88537094	+	88528906	88537094	A5SS	0.14	50	50	ENSMUST00000107510.10	ENSMUSG00000028059.17	Arhgef2	chr3	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 2
chr3	88530703	88537094	+	88528906	88537094	A5SS	0.14	50	50	ENSMUST00000107510.10	ENSMUSG00000028059.17	Arhgef2	chr3	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 2
chr3	88536870	88537094	+	88528906	88537094	A5SS	0.14	50	50	ENSMUST00000107510.10	ENSMUSG00000028059.17	Arhgef2	chr3	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 2
chr3	88536997	88537094	+	88528906	88537094	A5SS	0.14	50	50	ENSMUST00000107510.10	ENSMUSG00000028059.17	Arhgef2	chr3	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 2
chr3	88530703	88537094	+	88529904	88537094	A5SS	0.14	50	50	ENSMUST00000176307.8	ENSMUSG00000028059.17	Arhgef2	chr3	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 2
chr3	88536870	88537094	+	88529904	88537094	A5SS	0.14	50	50	ENSMUST00000176307.8	ENSMUSG00000028059.17	Arhgef2	chr3	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 2
chr3	88536997	88537094	+	88529904	88537094	A5SS	0.14	50	50	ENSMUST00000176307.8	ENSMUSG00000028059.17	Arhgef2	chr3	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 2
chr3	88530703	88537094	+	88536870	88537094	A5SS&ES	0.33	50	50	ENSMUST00000175911.8	ENSMUSG00000028059.17	Arhgef2	chr3	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 2
chr3	88536997	88537094	+	88536870	88537094	A5SS	0.33	50	50	ENSMUST00000175911.8	ENSMUSG00000028059.17	Arhgef2	chr3	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 2
chr3	88536997	88537094	+	88530703	88537094	A5SS	0.14	50	50	ENSMUST00000176243.8	ENSMUSG00000028059.17	Arhgef2	chr3	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 2
chr3	88607315	88607669	+	88607315	88607568	A3SS	0.33	50	50	ENSMUST00000029696.11	ENSMUSG00000028060.15	Khdc4	chr3	protein_coding	KH domain containing 4, pre-mRNA splicing factor
chr3	88607315	88607672	+	88607315	88607568	A3SS	0.33	50	50	ENSMUST00000029696.11	ENSMUSG00000028060.15	Khdc4	chr3	protein_coding	KH domain containing 4, pre-mRNA splicing factor
chr3	88616248	88617165	+	88616248	88617137	A3SS	0.5	50	50	ENSMUST00000029696.11	ENSMUSG00000028060.15	Khdc4	chr3	protein_coding	KH domain containing 4, pre-mRNA splicing factor
chr3	88607315	88607669	+	88607315	88607672	A3SS	0.33	50	50	ENSMUST00000198078.2	ENSMUSG00000028060.15	Khdc4	chr3	protein_coding	KH domain containing 4, pre-mRNA splicing factor
chr3	88624264	88624909	+	88624264;88624777	88624633;88624909	ES	0.5	50	50	ENSMUST00000029692.15	ENSMUSG00000028057.15	Rit1	chr3	protein_coding	Ras-like without CAAX 1
chr3	88624777	88624880	+	88624777	88624909	A3SS	0.5	50	50	ENSMUST00000029692.15	ENSMUSG00000028057.15	Rit1	chr3	protein_coding	Ras-like without CAAX 1
chr3	88624276	88624633	+	88624264	88624633	A5SS	0.5	50	50	ENSMUST00000029692.15	ENSMUSG00000028057.15	Rit1	chr3	protein_coding	Ras-like without CAAX 1
chr3	88633486	88633587	+	88633375	88633587	A5SS	0.5	50	50	ENSMUST00000029692.15	ENSMUSG00000028057.15	Rit1	chr3	protein_coding	Ras-like without CAAX 1
chr3	88624264	88624909	+	88624777	88624909	A5SS&ES	0.5	50	50	ENSMUST00000171645.8	ENSMUSG00000028057.15	Rit1	chr3	protein_coding	Ras-like without CAAX 1
chr3	88624264	88624909	+	88624264	88624633	A3SS&ES	0.5	50	50	ENSMUST00000172333.8	ENSMUSG00000028057.15	Rit1	chr3	protein_coding	Ras-like without CAAX 1
chr3	88656209	88669033	-	88656209	88659219	5pMXE	0.5	50	50	ENSMUST00000107503.8	ENSMUSG00000068923.15	Syt11	chr3	protein_coding	synaptotagmin XI
chr3	88655317	88656089	-	88655317	88656086	A5SS	0.5	50	50	ENSMUST00000107503.8	ENSMUSG00000068923.15	Syt11	chr3	protein_coding	synaptotagmin XI
chr3	88680342	88682411	-	88680297	88682411	A3SS	0.5	50	50	ENSMUST00000107505.8	ENSMUSG00000068923.15	Syt11	chr3	protein_coding	synaptotagmin XI
chr3	88708499	88739571	-	88732721	88739571	A3SS&ES	0.33	50	50	ENSMUST00000184014.8	ENSMUSG00000098912.8	1500004A13Rik	chr3	lncRNA	RIKEN cDNA 1500004A13 gene
chr3	88718676	88739571	-	88732721	88739571	A3SS&ES	0.33	50	50	ENSMUST00000184014.8	ENSMUSG00000098912.8	1500004A13Rik	chr3	lncRNA	RIKEN cDNA 1500004A13 gene
chr3	88729002	88732439	-	88691817	88732439	A3SS	0.33	50	50	ENSMUST00000184014.8	ENSMUSG00000098912.8	1500004A13Rik	chr3	lncRNA	RIKEN cDNA 1500004A13 gene
chr3	88731886	88732439	-	88691817	88732439	A3SS	0.33	50	50	ENSMUST00000184014.8	ENSMUSG00000098912.8	1500004A13Rik	chr3	lncRNA	RIKEN cDNA 1500004A13 gene
chr3	88708499	88739571	-	88708499;88718676	88718521;88739571	ES	0.33	50	50	ENSMUST00000183374.8	ENSMUSG00000098912.8	1500004A13Rik	chr3	lncRNA	RIKEN cDNA 1500004A13 gene
chr3	88715579	88718521	-	88708499	88718521	A3SS	0.33	50	50	ENSMUST00000183374.8	ENSMUSG00000098912.8	1500004A13Rik	chr3	lncRNA	RIKEN cDNA 1500004A13 gene
chr3	88718309	88718521	-	88708499	88718521	A3SS	0.33	50	50	ENSMUST00000183374.8	ENSMUSG00000098912.8	1500004A13Rik	chr3	lncRNA	RIKEN cDNA 1500004A13 gene
chr3	88715579	88718521	-	88715579;88718309	88717945;88718521	ES	0.5	50	50	ENSMUST00000183966.8	ENSMUSG00000098912.8	1500004A13Rik	chr3	lncRNA	RIKEN cDNA 1500004A13 gene
chr3	88731886	88732439	-	88729002	88732439	A3SS	0.33	50	50	ENSMUST00000184958.8	ENSMUSG00000098912.8	1500004A13Rik	chr3	lncRNA	RIKEN cDNA 1500004A13 gene
chr3	88777150	88787378	+	88777150;88783237	88783214;88787378	ES	0.5	50	50	ENSMUST00000107498.9	ENSMUSG00000054199.18	Gon4l	chr3	protein_coding	gon-4-like (C.elegans)
chr3	88763172;88763776	88763726;88764435	+	88763172	88764435	cassetteExon	0.5	100	100	ENSMUST00000107498.9	ENSMUSG00000054199.18	Gon4l	chr3	protein_coding	gon-4-like (C.elegans)
chr3	88753886	88761909	+	88753886	88761912	A3SS	0.5	50	50	ENSMUST00000107498.9	ENSMUSG00000054199.18	Gon4l	chr3	protein_coding	gon-4-like (C.elegans)
chr3	88777150	88786606	+	88777150	88783214	A3SS&ES	0.33	50	50	ENSMUST00000107498.9	ENSMUSG00000054199.18	Gon4l	chr3	protein_coding	gon-4-like (C.elegans)
chr3	88777150	88787378	+	88777150	88786606	A3SS&ES	0.33	50	50	ENSMUST00000090942.6	ENSMUSG00000054199.18	Gon4l	chr3	protein_coding	gon-4-like (C.elegans)
chr3	88820234	88820874	-	88820230	88820874	A3SS	0.5	50	50	ENSMUST00000107494.8	ENSMUSG00000068922.15	Msto1	chr3	protein_coding	misato 1, mitochondrial distribution and morphology regulator
chr3	88819607	88819931	-	88819607	88820010	A5SS	0.5	50	50	ENSMUST00000107494.8	ENSMUSG00000068922.15	Msto1	chr3	protein_coding	misato 1, mitochondrial distribution and morphology regulator
chr3	88832718	88834318	-	88832718;88833668	88833579;88834318	ES	0.5	50	50	ENSMUST00000090938.11	ENSMUSG00000068921.15	Dap3	chr3	protein_coding	death associated protein 3
chr3	88834377	88835754	-	88834377;88835674	88835516;88835754	ES	0.5	50	50	ENSMUST00000090938.11	ENSMUSG00000068921.15	Dap3	chr3	protein_coding	death associated protein 3
chr3	88838327	88843456	-	88838327;88840973	88840872;88843456	ES	0.5	50	50	ENSMUST00000090938.11	ENSMUSG00000068921.15	Dap3	chr3	protein_coding	death associated protein 3
chr3	88843560	88857175	-	88843560;88850135	88850082;88857175	ES	0.5	50	50	ENSMUST00000090938.11	ENSMUSG00000068921.15	Dap3	chr3	protein_coding	death associated protein 3
chr3	88850135	88858176	-	88850135	88857175	5pMXE	0.25	50	50	ENSMUST00000090938.11	ENSMUSG00000068921.15	Dap3	chr3	protein_coding	death associated protein 3
chr3	88850135	88858268	-	88850135	88857175	5pMXE	0.25	50	50	ENSMUST00000090938.11	ENSMUSG00000068921.15	Dap3	chr3	protein_coding	death associated protein 3
chr3	88843560	88845373	-	88843560	88850082	A5SS	0.33	50	50	ENSMUST00000090938.11	ENSMUSG00000068921.15	Dap3	chr3	protein_coding	death associated protein 3
chr3	88850135	88857423	-	88850135	88857175	A5SS	0.25	50	50	ENSMUST00000090938.11	ENSMUSG00000068921.15	Dap3	chr3	protein_coding	death associated protein 3
chr3	88834377;88835834	88835516;88836703	-	88834377	88836703	cassetteExon	0.5	100	100	ENSMUST00000174571.8	ENSMUSG00000068921.15	Dap3	chr3	protein_coding	death associated protein 3
chr3	88834377;88835834	88835754;88836703	-	88834377	88836703	cassetteExon	0.5	100	100	ENSMUST00000174571.8	ENSMUSG00000068921.15	Dap3	chr3	protein_coding	death associated protein 3
chr3	88850135;88858189	88858176;88858268	-	88850135	88858268	cassetteExon	0.5	100	100	ENSMUST00000173135.8	ENSMUSG00000068921.15	Dap3	chr3	protein_coding	death associated protein 3
chr3	88843560	88857175	-	88843560	88850082	A5SS&ES	0.33	50	50	ENSMUST00000173135.8	ENSMUSG00000068921.15	Dap3	chr3	protein_coding	death associated protein 3
chr3	88850135	88857423	-	88850135	88858268	A5SS	0.25	50	50	ENSMUST00000173135.8	ENSMUSG00000068921.15	Dap3	chr3	protein_coding	death associated protein 3
chr3	88834377	88836703	-	88835834	88836703	3pMXE	0.5	50	50	ENSMUST00000174077.8	ENSMUSG00000068921.15	Dap3	chr3	protein_coding	death associated protein 3
chr3	88850135	88858176	-	88850135	88857423	5pMXE	0.25	50	50	ENSMUST00000174077.8	ENSMUSG00000068921.15	Dap3	chr3	protein_coding	death associated protein 3
chr3	88843560;88857248	88857175;88857423	-	88843560;88850135	88850082;88857423	MXE	0.5	100	100	ENSMUST00000174077.8	ENSMUSG00000068921.15	Dap3	chr3	protein_coding	death associated protein 3
chr3	88850135;88857248	88857175;88857423	-	88850135	88857423	cassetteExon	0.5	100	100	ENSMUST00000174077.8	ENSMUSG00000068921.15	Dap3	chr3	protein_coding	death associated protein 3
chr3	88843560;88857248	88857175;88858176	-	88843560;88850135	88850082;88858176	MXE	0.5	100	100	ENSMUST00000173021.8	ENSMUSG00000068921.15	Dap3	chr3	protein_coding	death associated protein 3
chr3	88850135;88857248	88857175;88858176	-	88850135	88858176	cassetteExon	0.5	100	100	ENSMUST00000173021.8	ENSMUSG00000068921.15	Dap3	chr3	protein_coding	death associated protein 3
chr3	88850135	88858268	-	88850135	88858176	A5SS	0.25	50	50	ENSMUST00000173021.8	ENSMUSG00000068921.15	Dap3	chr3	protein_coding	death associated protein 3
chr3	88857248	88858176	-	88857248	88857423	5pMXE	0.5	50	50	ENSMUST00000174402.8	ENSMUSG00000068921.15	Dap3	chr3	protein_coding	death associated protein 3
chr3	88843560	88845373	-	88843560	88857175	A5SS	0.33	50	50	ENSMUST00000174402.8	ENSMUSG00000068921.15	Dap3	chr3	protein_coding	death associated protein 3
chr3	88838327	88843456	-	88840973	88843456	3pMXE	0.5	50	50	ENSMUST00000174491.2	ENSMUSG00000068921.15	Dap3	chr3	protein_coding	death associated protein 3
chr3	88850135	88858268	-	88858189	88858268	3pMXE	0.5	50	50	ENSMUST00000172790.2	ENSMUSG00000068921.15	Dap3	chr3	protein_coding	death associated protein 3
chr3	89008138	89009063	-	89008138	89008228	5pMXE	0.33	50	50	ENSMUST00000200659.2	ENSMUSG00000105204.2	Gm43738	chr3	protein_coding	predicted gene 43738
chr3	89008138	89009169	-	89008138	89008228	5pMXE	0.33	50	50	ENSMUST00000200659.2	ENSMUSG00000105204.2	Gm43738	chr3	protein_coding	predicted gene 43738
chr3	89001150;89001672	89001538;89001759	-	89001150	89001759	cassetteExon	0.5	100	100	ENSMUST00000200659.2	ENSMUSG00000105204.2	Gm43738	chr3	protein_coding	predicted gene 43738
chr3	89001884	89002167	-	89001836	89002167	A3SS	0.5	50	50	ENSMUST00000200659.2	ENSMUSG00000105204.2	Gm43738	chr3	protein_coding	predicted gene 43738
chr3	88997074	88997228	-	88997074	88999339	A5SS	0.2	50	50	ENSMUST00000200659.2	ENSMUSG00000105204.2	Gm43738	chr3	protein_coding	predicted gene 43738
chr3	88997074	88997278	-	88997074	88999339	A5SS	0.2	50	50	ENSMUST00000200659.2	ENSMUSG00000105204.2	Gm43738	chr3	protein_coding	predicted gene 43738
chr3	88997074	88997803	-	88997074	88999339	A5SS	0.2	50	50	ENSMUST00000200659.2	ENSMUSG00000105204.2	Gm43738	chr3	protein_coding	predicted gene 43738
chr3	88997074	88998445	-	88997074	88999339	A5SS	0.2	50	50	ENSMUST00000200659.2	ENSMUSG00000105204.2	Gm43738	chr3	protein_coding	predicted gene 43738
chr3	88997074	88997803	-	88997074	88997278	5pMXE	0.2	50	50	ENSMUST00000166687.6	ENSMUSG00000041263.15	Rusc1	chr3	protein_coding	RUN and SH3 domain containing 1
chr3	88997074	88998445	-	88997074	88997278	5pMXE	0.2	50	50	ENSMUST00000166687.6	ENSMUSG00000041263.15	Rusc1	chr3	protein_coding	RUN and SH3 domain containing 1
chr3	88997074	88997228	-	88997074	88997278	A5SS	0.2	50	50	ENSMUST00000166687.6	ENSMUSG00000041263.15	Rusc1	chr3	protein_coding	RUN and SH3 domain containing 1
chr3	88997074	88998445	-	88997074;88998213	88997803;88998445	ES	0.5	50	50	ENSMUST00000090929.12	ENSMUSG00000041263.15	Rusc1	chr3	protein_coding	RUN and SH3 domain containing 1
chr3	88997074	88997228	-	88997074	88997803	A5SS	0.2	50	50	ENSMUST00000090929.12	ENSMUSG00000041263.15	Rusc1	chr3	protein_coding	RUN and SH3 domain containing 1
chr3	88997074	88997228	-	88997074	88998445	A5SS	0.2	50	50	ENSMUST00000052539.13	ENSMUSG00000041263.15	Rusc1	chr3	protein_coding	RUN and SH3 domain containing 1
chr3	89008138	89009169	-	89008138;89008443	89008228;89009169	ES	0.5	50	50	ENSMUST00000196709.5	ENSMUSG00000059743.13	Fdps	chr3	protein_coding	farnesyl diphosphate synthetase
chr3	89008138	89009063	-	89008138	89009169	A5SS	0.33	50	50	ENSMUST00000081848.13	ENSMUSG00000059743.13	Fdps	chr3	protein_coding	farnesyl diphosphate synthetase
chr3	89044713	89044916	+	89044713	89048622	A3SS	0.5	50	50	ENSMUST00000047111.13	ENSMUSG00000041237.13	Pklr	chr3	protein_coding	pyruvate kinase liver and red blood cell
chr3	89043925	89044531	+	89043589	89044531	A5SS	0.33	50	50	ENSMUST00000047111.13	ENSMUSG00000041237.13	Pklr	chr3	protein_coding	pyruvate kinase liver and red blood cell
chr3	89043944	89044531	+	89043589	89044531	A5SS	0.33	50	50	ENSMUST00000047111.13	ENSMUSG00000041237.13	Pklr	chr3	protein_coding	pyruvate kinase liver and red blood cell
chr3	89043925	89044531	+	89043944	89044531	A5SS	0.33	50	50	ENSMUST00000107482.10	ENSMUSG00000041237.13	Pklr	chr3	protein_coding	pyruvate kinase liver and red blood cell
chr3	89056188	89057662	-	89056188;89057363	89057123;89057662	ES	0.5	50	50	ENSMUST00000029686.4	ENSMUSG00000028051.11	Hcn3	chr3	protein_coding	hyperpolarization-activated, cyclic nucleotide-gated K+ 3
chr3	89076230	89077356	+	89076230;89077009	89076925;89077356	ES	0.5	50	50	ENSMUST00000121212.9	ENSMUSG00000068917.13	Clk2	chr3	protein_coding	CDC-like kinase 2
chr3	89072413;89074121	89073989;89074342	+	89072413	89074342	cassetteExon	0.5	100	100	ENSMUST00000121212.9	ENSMUSG00000068917.13	Clk2	chr3	protein_coding	CDC-like kinase 2
chr3	89074511	89076005	+	89074511	89076002	A3SS	0.5	50	50	ENSMUST00000121212.9	ENSMUSG00000068917.13	Clk2	chr3	protein_coding	CDC-like kinase 2
chr3	89076230	89076922	+	89076230	89076925	A3SS	0.33	50	50	ENSMUST00000121212.9	ENSMUSG00000068917.13	Clk2	chr3	protein_coding	CDC-like kinase 2
chr3	89072198	89074342	+	89072413	89074342	A5SS	0.33	50	50	ENSMUST00000121212.9	ENSMUSG00000068917.13	Clk2	chr3	protein_coding	CDC-like kinase 2
chr3	89072198	89074342	+	89074121	89074342	A5SS&ES	0.33	50	50	ENSMUST00000152205.5	ENSMUSG00000068917.13	Clk2	chr3	protein_coding	CDC-like kinase 2
chr3	89076230	89077356	+	89076230;89077009	89076922;89077356	ES	0.5	50	50	ENSMUST00000121931.8	ENSMUSG00000068917.13	Clk2	chr3	protein_coding	CDC-like kinase 2
chr3	89076230	89077356	+	89076230	89076922	A3SS	0.33	50	50	ENSMUST00000133323.2	ENSMUSG00000068917.13	Clk2	chr3	protein_coding	CDC-like kinase 2
chr3	89088195	89089233	+	89088195;89088583	89088482;89089233	ES	0.5	50	50	ENSMUST00000029684.15	ENSMUSG00000028049.16	Scamp3	chr3	protein_coding	secretory carrier membrane protein 3
chr3	89085374	89086399	+	89085374	89086402	A3SS	0.5	50	50	ENSMUST00000029684.15	ENSMUSG00000028049.16	Scamp3	chr3	protein_coding	secretory carrier membrane protein 3
chr3	89086744	89087346	+	89086744	89087559	A3SS	0.5	50	50	ENSMUST00000029684.15	ENSMUSG00000028049.16	Scamp3	chr3	protein_coding	secretory carrier membrane protein 3
chr3	89088195	89089233	+	89088195	89088482	3pMXE	0.5	50	50	ENSMUST00000129294.8	ENSMUSG00000028049.16	Scamp3	chr3	protein_coding	secretory carrier membrane protein 3
chr3	89091255	89091720	+	89091255;89091515	89091459;89091720	ES	0.5	50	50	ENSMUST00000041913.13	ENSMUSG00000032657.16	Fam189b	chr3	protein_coding	family with sequence similarity 189, member B
chr3	89092916	89094086	+	89092916;89093140	89093041;89094086	ES	0.5	50	50	ENSMUST00000041913.13	ENSMUSG00000032657.16	Fam189b	chr3	protein_coding	family with sequence similarity 189, member B
chr3	89091255	89091362	+	89091255	89091459	A3SS	0.33	50	50	ENSMUST00000041913.13	ENSMUSG00000032657.16	Fam189b	chr3	protein_coding	family with sequence similarity 189, member B
chr3	89092303	89092744	+	89092303	89092741	A3SS	0.33	50	50	ENSMUST00000041913.13	ENSMUSG00000032657.16	Fam189b	chr3	protein_coding	family with sequence similarity 189, member B
chr3	89092303	89092763	+	89092303	89092741	A3SS	0.33	50	50	ENSMUST00000041913.13	ENSMUSG00000032657.16	Fam189b	chr3	protein_coding	family with sequence similarity 189, member B
chr3	89095335	89095530	+	89095451	89095530	A5SS&ES	0.5	50	50	ENSMUST00000041913.13	ENSMUSG00000032657.16	Fam189b	chr3	protein_coding	family with sequence similarity 189, member B
chr3	89092303	89092763	+	89092303	89092744	A3SS	0.33	50	50	ENSMUST00000147696.8	ENSMUSG00000032657.16	Fam189b	chr3	protein_coding	family with sequence similarity 189, member B
chr3	89091255	89091720	+	89091255;89091515	89091362;89091720	ES	0.5	50	50	ENSMUST00000127982.8	ENSMUSG00000032657.16	Fam189b	chr3	protein_coding	family with sequence similarity 189, member B
chr3	89091255;89091515	89091362;89092196	+	89091255;89092056	89091720;89092196	MXE	0.5	100	100	ENSMUST00000117278.8	ENSMUSG00000032657.16	Fam189b	chr3	protein_coding	family with sequence similarity 189, member B
chr3	89091255;89091515	89091459;89092196	+	89091255;89092056	89091720;89092196	MXE	0.5	100	100	ENSMUST00000117278.8	ENSMUSG00000032657.16	Fam189b	chr3	protein_coding	family with sequence similarity 189, member B
chr3	89091515;89092056	89091720;89092196	+	89091515	89092196	cassetteExon	0.5	100	100	ENSMUST00000119707.2	ENSMUSG00000032657.16	Fam189b	chr3	protein_coding	family with sequence similarity 189, member B
chr3	89092916	89094086	+	89092916	89093041	3pMXE	0.5	50	50	ENSMUST00000126115.2	ENSMUSG00000032657.16	Fam189b	chr3	protein_coding	family with sequence similarity 189, member B
chr3	89110393;89110667	89110499;89110779	+	89110393	89110779	cassetteExon	0.5	100	100	ENSMUST00000077367.11	ENSMUSG00000028048.12	Gba	chr3	protein_coding	glucosidase, beta, acid
chr3	89114758	89115091	+	89114758	89115131	A3SS	0.5	50	50	ENSMUST00000077367.11	ENSMUSG00000028048.12	Gba	chr3	protein_coding	glucosidase, beta, acid
chr3	89115294	89115623	+	89115294	89115619	A3SS	0.5	50	50	ENSMUST00000077367.11	ENSMUSG00000028048.12	Gba	chr3	protein_coding	glucosidase, beta, acid
chr3	89116966	89117573	-	89116966;89117490	89117414;89117573	ES	0.5	50	50	ENSMUST00000239452.2	ENSMUSG00000064068.16	Mtx1	chr3	protein_coding	metaxin 1
chr3	89117755	89119990	-	89117755;89117983	89117891;89119990	ES	0.33	50	50	ENSMUST00000239452.2	ENSMUSG00000064068.16	Mtx1	chr3	protein_coding	metaxin 1
chr3	89120069	89121120	-	89120069;89120253	89120184;89121120	ES	0.5	50	50	ENSMUST00000239452.2	ENSMUSG00000064068.16	Mtx1	chr3	protein_coding	metaxin 1
chr3	89116936	89117414	-	89116966	89117414	A3SS	0.5	50	50	ENSMUST00000239452.2	ENSMUSG00000064068.16	Mtx1	chr3	protein_coding	metaxin 1
chr3	89117980	89119990	-	89117983	89119990	A3SS	0.33	50	50	ENSMUST00000239452.2	ENSMUSG00000064068.16	Mtx1	chr3	protein_coding	metaxin 1
chr3	89116728	89117339	-	89116728	89116812	A5SS&ES	0.5	50	50	ENSMUST00000239452.2	ENSMUSG00000064068.16	Mtx1	chr3	protein_coding	metaxin 1
chr3	89116966	89117339	-	89116966	89117414	A5SS	0.33	50	50	ENSMUST00000239452.2	ENSMUSG00000064068.16	Mtx1	chr3	protein_coding	metaxin 1
chr3	89120253	89120949	-	89120253	89121120	A5SS	0.5	50	50	ENSMUST00000239452.2	ENSMUSG00000064068.16	Mtx1	chr3	protein_coding	metaxin 1
chr3	89116966	89117573	-	89117490	89117573	A3SS&ES	0.5	50	50	ENSMUST00000173475.8	ENSMUSG00000064068.16	Mtx1	chr3	protein_coding	metaxin 1
chr3	89116728	89117339	-	89116728;89116966	89116812;89117339	ES	0.5	50	50	ENSMUST00000138249.8	ENSMUSG00000064068.16	Mtx1	chr3	protein_coding	metaxin 1
chr3	89116966	89117573	-	89116966	89117339	5pMXE	0.33	50	50	ENSMUST00000138249.8	ENSMUSG00000064068.16	Mtx1	chr3	protein_coding	metaxin 1
chr3	89117755;89117980	89117891;89119990	-	89117755	89119990	cassetteExon	0.5	100	100	ENSMUST00000118964.10	ENSMUSG00000064068.16	Mtx1	chr3	protein_coding	metaxin 1
chr3	89120069	89121120	-	89120253	89121120	A3SS	0.5	50	50	ENSMUST00000119222.9	ENSMUSG00000064068.16	Mtx1	chr3	protein_coding	metaxin 1
chr3	89116728;89117490	89117339;89117573	-	89116728;89116966	89116812;89117573	MXE	0.5	100	100	ENSMUST00000173593.8	ENSMUSG00000064068.16	Mtx1	chr3	protein_coding	metaxin 1
chr3	89116966;89117490	89117339;89117573	-	89116966	89117573	cassetteExon	0.5	100	100	ENSMUST00000173593.8	ENSMUSG00000064068.16	Mtx1	chr3	protein_coding	metaxin 1
chr3	89131977	89134328	-	89120069	89134328	A3SS	0.5	50	50	ENSMUST00000174126.8	ENSMUSG00000064068.16	Mtx1	chr3	protein_coding	metaxin 1
chr3	89120069	89120184	-	89120069	89134328	A5SS	0.33	50	50	ENSMUST00000174126.8	ENSMUSG00000064068.16	Mtx1	chr3	protein_coding	metaxin 1
chr3	89120069	89121120	-	89120069	89134328	A5SS	0.33	50	50	ENSMUST00000174126.8	ENSMUSG00000064068.16	Mtx1	chr3	protein_coding	metaxin 1
chr3	89117755	89119990	-	89117755	89117891	5pMXE	0.5	50	50	ENSMUST00000124086.9	ENSMUSG00000064068.16	Mtx1	chr3	protein_coding	metaxin 1
chr3	89116966	89117573	-	89116966	89117414	A5SS	0.33	50	50	ENSMUST00000138633.3	ENSMUSG00000064068.16	Mtx1	chr3	protein_coding	metaxin 1
chr3	89120069	89121120	-	89120069	89120184	5pMXE	0.33	50	50	ENSMUST00000152789.9	ENSMUSG00000064068.16	Mtx1	chr3	protein_coding	metaxin 1
chr3	89122631	89124992	+	89122631;89124194	89123988;89124992	ES	0.5	50	50	ENSMUST00000029682.11	ENSMUSG00000028047.12	Thbs3	chr3	protein_coding	thrombospondin 3
chr3	89128417	89128834	+	89128417;89128751	89128641;89128834	ES	0.5	50	50	ENSMUST00000029682.11	ENSMUSG00000028047.12	Thbs3	chr3	protein_coding	thrombospondin 3
chr3	89131771	89132205	+	89131771	89131884	A3SS&ES	0.5	50	50	ENSMUST00000029682.11	ENSMUSG00000028047.12	Thbs3	chr3	protein_coding	thrombospondin 3
chr3	89128520	89128641	+	89128417	89128641	A5SS	0.5	50	50	ENSMUST00000029682.11	ENSMUSG00000028047.12	Thbs3	chr3	protein_coding	thrombospondin 3
chr3	89132583	89133611	+	89132731	89133611	A5SS	0.5	50	50	ENSMUST00000029682.11	ENSMUSG00000028047.12	Thbs3	chr3	protein_coding	thrombospondin 3
chr3	89122631	89124992	+	89122631	89123988	A3SS	0.5	50	50	ENSMUST00000126315.8	ENSMUSG00000028047.12	Thbs3	chr3	protein_coding	thrombospondin 3
chr3	89138941	89139070	+	89138807	89139070	A5SS	0.5	50	50	ENSMUST00000139206.2	ENSMUSG00000042784.10	Muc1	chr3	protein_coding	mucin 1, transmembrane
chr3	89142599	89144924	-	89142599;89143907	89143610;89144924	ES	0.5	50	50	ENSMUST00000107464.8	ENSMUSG00000042766.18	Trim46	chr3	protein_coding	tripartite motif-containing 46
chr3	89151718	89152427	-	89151718	89152008	5pMXE	0.25	50	50	ENSMUST00000107464.8	ENSMUSG00000042766.18	Trim46	chr3	protein_coding	tripartite motif-containing 46
chr3	89151718	89153022	-	89151718	89152008	5pMXE	0.25	50	50	ENSMUST00000107464.8	ENSMUSG00000042766.18	Trim46	chr3	protein_coding	tripartite motif-containing 46
chr3	89151718	89153378	-	89151718	89152008	5pMXE	0.25	50	50	ENSMUST00000107464.8	ENSMUSG00000042766.18	Trim46	chr3	protein_coding	tripartite motif-containing 46
chr3	89145226;89146010	89145973;89146205	-	89145226	89146205	cassetteExon	0.5	100	100	ENSMUST00000107464.8	ENSMUSG00000042766.18	Trim46	chr3	protein_coding	tripartite motif-containing 46
chr3	89151718	89153022	-	89151718	89152427	5pMXE	0.25	50	50	ENSMUST00000090924.13	ENSMUSG00000042766.18	Trim46	chr3	protein_coding	tripartite motif-containing 46
chr3	89151718	89153378	-	89151718	89152427	5pMXE	0.25	50	50	ENSMUST00000090924.13	ENSMUSG00000042766.18	Trim46	chr3	protein_coding	tripartite motif-containing 46
chr3	89151718	89153378	-	89151718	89153022	5pMXE	0.25	50	50	ENSMUST00000041022.15	ENSMUSG00000042766.18	Trim46	chr3	protein_coding	tripartite motif-containing 46
chr3	89177446	89177823	-	89177446	89177693	5pMXE	0.33	50	50	ENSMUST00000185119.8	ENSMUSG00000027953.14	Slc50a1	chr3	protein_coding	solute carrier family 50 (sugar transporter), member 1
chr3	89176099;89177257	89177134;89177369	-	89176099;89176518	89176357;89177369	MXE	0.5	100	100	ENSMUST00000185119.8	ENSMUSG00000027953.14	Slc50a1	chr3	protein_coding	solute carrier family 50 (sugar transporter), member 1
chr3	89176518;89177257	89177134;89177369	-	89176518	89177369	cassetteExon	0.5	100	100	ENSMUST00000185119.8	ENSMUSG00000027953.14	Slc50a1	chr3	protein_coding	solute carrier family 50 (sugar transporter), member 1
chr3	89177446	89177778	-	89177446	89177693	A5SS	0.33	50	50	ENSMUST00000185119.8	ENSMUSG00000027953.14	Slc50a1	chr3	protein_coding	solute carrier family 50 (sugar transporter), member 1
chr3	89176099;89176518	89176357;89177134	-	89176099	89177134	cassetteExon	0.5	100	100	ENSMUST00000107460.8	ENSMUSG00000027953.14	Slc50a1	chr3	protein_coding	solute carrier family 50 (sugar transporter), member 1
chr3	89176099;89176605	89176357;89177134	-	89176099	89177134	cassetteExon	0.5	100	100	ENSMUST00000107460.8	ENSMUSG00000027953.14	Slc50a1	chr3	protein_coding	solute carrier family 50 (sugar transporter), member 1
chr3	89176605	89177134	-	89176518	89177134	A3SS	0.33	50	50	ENSMUST00000132445.8	ENSMUSG00000027953.14	Slc50a1	chr3	protein_coding	solute carrier family 50 (sugar transporter), member 1
chr3	89176518	89177369	-	89176518	89177134	A5SS	0.5	50	50	ENSMUST00000132445.8	ENSMUSG00000027953.14	Slc50a1	chr3	protein_coding	solute carrier family 50 (sugar transporter), member 1
chr3	89177446	89177823	-	89177446	89177778	A5SS	0.33	50	50	ENSMUST00000148095.2	ENSMUSG00000027953.14	Slc50a1	chr3	protein_coding	solute carrier family 50 (sugar transporter), member 1
chr3	89176099	89177134	-	89176518	89177134	3pMXE	0.33	50	50	ENSMUST00000130230.2	ENSMUSG00000027953.14	Slc50a1	chr3	protein_coding	solute carrier family 50 (sugar transporter), member 1
chr3	89180129	89183437	-	89180129;89180329	89180264;89183437	ES	0.5	50	50	ENSMUST00000029566.9	ENSMUSG00000027954.10	Efna1	chr3	protein_coding	ephrin A1
chr3	89183732	89188100	-	89183732	89186758	5pMXE	0.5	50	50	ENSMUST00000029566.9	ENSMUSG00000027954.10	Efna1	chr3	protein_coding	ephrin A1
chr3	89222874	89223377	-	89222874;89223192	89223115;89223377	ES	0.5	50	50	ENSMUST00000029673.10	ENSMUSG00000028039.12	Efna3	chr3	protein_coding	ephrin A3
chr3	89224059	89228868	-	89224059	89230013	A5SS	0.5	50	50	ENSMUST00000029673.10	ENSMUSG00000028039.12	Efna3	chr3	protein_coding	ephrin A3
chr3	89222874	89223377	-	89223192	89223377	3pMXE	0.5	50	50	ENSMUST00000139439.2	ENSMUSG00000028039.12	Efna3	chr3	protein_coding	ephrin A3
chr3	89247779	89248815	-	89247779;89248244	89248170;89248815	ES	0.33	50	50	ENSMUST00000184651.8	ENSMUSG00000028041.18	Adam15	chr3	protein_coding	a disintegrin and metallopeptidase domain 15 (metargidin)
chr3	89247429	89247708	-	89247486	89247708	A3SS	0.5	50	50	ENSMUST00000184651.8	ENSMUSG00000028041.18	Adam15	chr3	protein_coding	a disintegrin and metallopeptidase domain 15 (metargidin)
chr3	89247486	89247723	-	89247486	89247708	A5SS	0.33	50	50	ENSMUST00000184651.8	ENSMUSG00000028041.18	Adam15	chr3	protein_coding	a disintegrin and metallopeptidase domain 15 (metargidin)
chr3	89247779	89248421	-	89247779	89248170	A5SS&ES	0.33	50	50	ENSMUST00000184651.8	ENSMUSG00000028041.18	Adam15	chr3	protein_coding	a disintegrin and metallopeptidase domain 15 (metargidin)
chr3	89255934	89256122	-	89255934	89257116	A5SS	0.5	50	50	ENSMUST00000184651.8	ENSMUSG00000028041.18	Adam15	chr3	protein_coding	a disintegrin and metallopeptidase domain 15 (metargidin)
chr3	89247486	89248815	-	89247486;89247779	89247708;89248815	ES	0.33	50	50	ENSMUST00000107448.9	ENSMUSG00000028041.18	Adam15	chr3	protein_coding	a disintegrin and metallopeptidase domain 15 (metargidin)
chr3	89247779	89248421	-	89247779	89248815	A5SS	0.33	50	50	ENSMUST00000107448.9	ENSMUSG00000028041.18	Adam15	chr3	protein_coding	a disintegrin and metallopeptidase domain 15 (metargidin)
chr3	89247486;89247779	89247723;89248815	-	89247486	89248815	cassetteExon	0.5	100	100	ENSMUST00000074582.7	ENSMUSG00000028041.18	Adam15	chr3	protein_coding	a disintegrin and metallopeptidase domain 15 (metargidin)
chr3	89248244	89248815	-	89247486	89248815	A3SS	0.33	50	50	ENSMUST00000074582.7	ENSMUSG00000028041.18	Adam15	chr3	protein_coding	a disintegrin and metallopeptidase domain 15 (metargidin)
chr3	89247486	89248815	-	89247486	89247723	5pMXE	0.33	50	50	ENSMUST00000155868.2	ENSMUSG00000028041.18	Adam15	chr3	protein_coding	a disintegrin and metallopeptidase domain 15 (metargidin)
chr3	89260689	89261105	-	89260689;89260948	89260822;89261105	ES	0.33	50	50	ENSMUST00000070820.7	ENSMUSG00000042672.16	Dcst1	chr3	protein_coding	DC-STAMP domain containing 1
chr3	89265233	89266382	-	89265233;89266008	89265869;89266382	ES	0.5	50	50	ENSMUST00000070820.7	ENSMUSG00000042672.16	Dcst1	chr3	protein_coding	DC-STAMP domain containing 1
chr3	89260685	89261105	-	89260948	89261105	A3SS&ES	0.33	50	50	ENSMUST00000070820.7	ENSMUSG00000042672.16	Dcst1	chr3	protein_coding	DC-STAMP domain containing 1
chr3	89260152	89260529	-	89260152	89260573	A5SS	0.5	50	50	ENSMUST00000070820.7	ENSMUSG00000042672.16	Dcst1	chr3	protein_coding	DC-STAMP domain containing 1
chr3	89261497	89262728	-	89261497	89263544	A5SS	0.5	50	50	ENSMUST00000070820.7	ENSMUSG00000042672.16	Dcst1	chr3	protein_coding	DC-STAMP domain containing 1
chr3	89260685	89261105	-	89260689	89261105	A3SS	0.33	50	50	ENSMUST00000139467.8	ENSMUSG00000042672.16	Dcst1	chr3	protein_coding	DC-STAMP domain containing 1
chr3	89288822	89299261	-	89288822	89294370	5pMXE	0.25	50	50	ENSMUST00000107433.8	ENSMUSG00000028042.16	Zbtb7b	chr3	protein_coding	zinc finger and BTB domain containing 7B
chr3	89288822	89300342	-	89288822	89294370	5pMXE	0.25	50	50	ENSMUST00000107433.8	ENSMUSG00000028042.16	Zbtb7b	chr3	protein_coding	zinc finger and BTB domain containing 7B
chr3	89288822;89293169	89292969;89294370	-	89288822	89294370	cassetteExon	0.5	100	100	ENSMUST00000107433.8	ENSMUSG00000028042.16	Zbtb7b	chr3	protein_coding	zinc finger and BTB domain containing 7B
chr3	89288822	89300342	-	89288822	89299261	5pMXE	0.25	50	50	ENSMUST00000107432.8	ENSMUSG00000028042.16	Zbtb7b	chr3	protein_coding	zinc finger and BTB domain containing 7B
chr3	89288822	89292969	-	89288822	89299261	A5SS	0.25	50	50	ENSMUST00000107432.8	ENSMUSG00000028042.16	Zbtb7b	chr3	protein_coding	zinc finger and BTB domain containing 7B
chr3	89299995	89300342	-	89288822	89300342	A3SS	0.5	50	50	ENSMUST00000029677.9	ENSMUSG00000028042.16	Zbtb7b	chr3	protein_coding	zinc finger and BTB domain containing 7B
chr3	89288822	89292969	-	89288822	89300342	A5SS	0.25	50	50	ENSMUST00000029677.9	ENSMUSG00000028042.16	Zbtb7b	chr3	protein_coding	zinc finger and BTB domain containing 7B
chr3	89300442	89301098	-	89300442	89300921	5pMXE	0.25	50	50	ENSMUST00000126027.8	ENSMUSG00000028042.16	Zbtb7b	chr3	protein_coding	zinc finger and BTB domain containing 7B
chr3	89300442	89300618	-	89300442	89300921	A5SS	0.25	50	50	ENSMUST00000126027.8	ENSMUSG00000028042.16	Zbtb7b	chr3	protein_coding	zinc finger and BTB domain containing 7B
chr3	89300442	89300784	-	89300442	89300921	A5SS	0.25	50	50	ENSMUST00000126027.8	ENSMUSG00000028042.16	Zbtb7b	chr3	protein_coding	zinc finger and BTB domain containing 7B
chr3	89300442	89300618	-	89300370	89300618	A3SS	0.5	50	50	ENSMUST00000142119.2	ENSMUSG00000028042.16	Zbtb7b	chr3	protein_coding	zinc finger and BTB domain containing 7B
chr3	89300442	89300784	-	89300442	89300618	5pMXE	0.25	50	50	ENSMUST00000148361.8	ENSMUSG00000028042.16	Zbtb7b	chr3	protein_coding	zinc finger and BTB domain containing 7B
chr3	89300442	89301098	-	89300442	89300618	5pMXE	0.25	50	50	ENSMUST00000148361.8	ENSMUSG00000028042.16	Zbtb7b	chr3	protein_coding	zinc finger and BTB domain containing 7B
chr3	89300442	89301098	-	89300442	89300784	5pMXE	0.25	50	50	ENSMUST00000124783.8	ENSMUSG00000028042.16	Zbtb7b	chr3	protein_coding	zinc finger and BTB domain containing 7B
chr3	89299609	89305266	+	89299813	89305266	A5SS	0.25	50	50	ENSMUST00000145400.8	ENSMUSG00000074466.13	Gm15417	chr3	lncRNA	predicted gene 15417
chr3	89301700	89305266	+	89299813	89305266	A5SS	0.25	50	50	ENSMUST00000145400.8	ENSMUSG00000074466.13	Gm15417	chr3	lncRNA	predicted gene 15417
chr3	89303389	89305266	+	89299813	89305266	A5SS	0.25	50	50	ENSMUST00000145400.8	ENSMUSG00000074466.13	Gm15417	chr3	lncRNA	predicted gene 15417
chr3	89301700	89305266	+	89299609	89305266	A5SS	0.25	50	50	ENSMUST00000152143.2	ENSMUSG00000074466.13	Gm15417	chr3	lncRNA	predicted gene 15417
chr3	89303389	89305266	+	89299609	89305266	A5SS	0.25	50	50	ENSMUST00000152143.2	ENSMUSG00000074466.13	Gm15417	chr3	lncRNA	predicted gene 15417
chr3	89303389	89305266	+	89301700	89305266	A5SS	0.25	50	50	ENSMUST00000126926.2	ENSMUSG00000074466.13	Gm15417	chr3	lncRNA	predicted gene 15417
chr3	89318687	89318868	-	89318687	89319091	A5SS	0.25	50	50	ENSMUST00000050398.11	ENSMUSG00000042642.14	Flad1	chr3	protein_coding	flavin adenine dinucleotide synthetase 1
chr3	89318687	89319053	-	89318687	89319091	A5SS	0.25	50	50	ENSMUST00000050398.11	ENSMUSG00000042642.14	Flad1	chr3	protein_coding	flavin adenine dinucleotide synthetase 1
chr3	89318687	89319125	-	89318687	89319091	A5SS	0.25	50	50	ENSMUST00000050398.11	ENSMUSG00000042642.14	Flad1	chr3	protein_coding	flavin adenine dinucleotide synthetase 1
chr3	89318687	89318868	-	89318687	89319053	A5SS	0.25	50	50	ENSMUST00000107426.8	ENSMUSG00000042642.14	Flad1	chr3	protein_coding	flavin adenine dinucleotide synthetase 1
chr3	89318687	89319125	-	89318687	89319053	A5SS	0.25	50	50	ENSMUST00000107426.8	ENSMUSG00000042642.14	Flad1	chr3	protein_coding	flavin adenine dinucleotide synthetase 1
chr3	89318687	89319125	-	89318687	89318868	5pMXE	0.25	50	50	ENSMUST00000107429.10	ENSMUSG00000042642.14	Flad1	chr3	protein_coding	flavin adenine dinucleotide synthetase 1
chr3	89323708	89325094	-	89323708	89325462	A5SS	0.33	50	50	ENSMUST00000029679.4	ENSMUSG00000028044.7	Cks1b	chr3	protein_coding	CDC28 protein kinase 1b
chr3	89323708	89325416	-	89323708	89325462	A5SS	0.33	50	50	ENSMUST00000029679.4	ENSMUSG00000028044.7	Cks1b	chr3	protein_coding	CDC28 protein kinase 1b
chr3	89323708	89325416	-	89323708	89325094	5pMXE	0.33	50	50	ENSMUST00000107422.2	ENSMUSG00000028044.7	Cks1b	chr3	protein_coding	CDC28 protein kinase 1b
chr3	89326016	89330233	+	89326016;89329652	89329485;89330233	ES	0.5	50	50	ENSMUST00000039110.12	ENSMUSG00000042626.14	Shc1	chr3	protein_coding	src homology 2 domain-containing transforming protein C1
chr3	89330878	89331497	+	89330878;89331123	89331004;89331497	ES	0.5	50	50	ENSMUST00000039110.12	ENSMUSG00000042626.14	Shc1	chr3	protein_coding	src homology 2 domain-containing transforming protein C1
chr3	89331123	89331862	+	89331123;89331550	89331497;89331862	ES	0.5	50	50	ENSMUST00000039110.12	ENSMUSG00000042626.14	Shc1	chr3	protein_coding	src homology 2 domain-containing transforming protein C1
chr3	89329055	89329485	+	89326016	89329485	A5SS	0.5	50	50	ENSMUST00000039110.12	ENSMUSG00000042626.14	Shc1	chr3	protein_coding	src homology 2 domain-containing transforming protein C1
chr3	89330878;89331550	89331497;89331862	+	89330878;89331123	89331004;89331862	MXE	0.5	100	100	ENSMUST00000128238.8	ENSMUSG00000042626.14	Shc1	chr3	protein_coding	src homology 2 domain-containing transforming protein C1
chr3	89330878	89331497	+	89330878	89331004	3pMXE	0.5	50	50	ENSMUST00000153334.2	ENSMUSG00000042626.14	Shc1	chr3	protein_coding	src homology 2 domain-containing transforming protein C1
chr3	89326016	89330233	+	89329652	89330233	5pMXE	0.5	50	50	ENSMUST00000094378.10	ENSMUSG00000042626.14	Shc1	chr3	protein_coding	src homology 2 domain-containing transforming protein C1
chr3	89338036	89338434	+	89337760	89338434	A5SS	0.25	50	50	ENSMUST00000136573.8	ENSMUSG00000047824.14	Pygo2	chr3	protein_coding	pygopus 2
chr3	89338145	89338434	+	89337760	89338434	A5SS	0.25	50	50	ENSMUST00000136573.8	ENSMUSG00000047824.14	Pygo2	chr3	protein_coding	pygopus 2
chr3	89338325	89338434	+	89337760	89338434	A5SS	0.25	50	50	ENSMUST00000136573.8	ENSMUSG00000047824.14	Pygo2	chr3	protein_coding	pygopus 2
chr3	89338036	89338327	+	89338036	89338434	A3SS	0.5	50	50	ENSMUST00000060061.11	ENSMUSG00000047824.14	Pygo2	chr3	protein_coding	pygopus 2
chr3	89338145	89338434	+	89338036	89338434	A5SS	0.25	50	50	ENSMUST00000060061.11	ENSMUSG00000047824.14	Pygo2	chr3	protein_coding	pygopus 2
chr3	89338325	89338434	+	89338036	89338434	A5SS	0.25	50	50	ENSMUST00000060061.11	ENSMUSG00000047824.14	Pygo2	chr3	protein_coding	pygopus 2
chr3	89338325	89338434	+	89338145	89338434	A5SS	0.25	50	50	ENSMUST00000133680.2	ENSMUSG00000047824.14	Pygo2	chr3	protein_coding	pygopus 2
chr3	89346908	89350759	+	89346908;89350555	89350429;89350759	ES	0.5	50	50	ENSMUST00000038942.10	ENSMUSG00000042613.10	Pbxip1	chr3	protein_coding	pre B cell leukemia transcription factor interacting protein 1
chr3	89346908	89350408	+	89346908	89350429	A3SS	0.33	50	50	ENSMUST00000038942.10	ENSMUSG00000042613.10	Pbxip1	chr3	protein_coding	pre B cell leukemia transcription factor interacting protein 1
chr3	89344261	89346824	+	89344087	89346824	A5SS	0.5	50	50	ENSMUST00000038942.10	ENSMUSG00000042613.10	Pbxip1	chr3	protein_coding	pre B cell leukemia transcription factor interacting protein 1
chr3	89346908;89350555	89350408;89350759	+	89346908	89350759	cassetteExon	0.5	100	100	ENSMUST00000141340.2	ENSMUSG00000042613.10	Pbxip1	chr3	protein_coding	pre B cell leukemia transcription factor interacting protein 1
chr3	89369252	89371603	+	89362046	89371603	A5SS	0.5	50	50	ENSMUST00000198440.5	ENSMUSG00000027952.17	Pmvk	chr3	protein_coding	phosphomevalonate kinase
chr3	89367193	89369189	+	89366771	89369189	A5SS	0.5	50	50	ENSMUST00000029564.12	ENSMUSG00000027952.17	Pmvk	chr3	protein_coding	phosphomevalonate kinase
chr3	89622845	89642149	+	89622457	89642149	A5SS	0.33	50	50	ENSMUST00000098924.9	ENSMUSG00000027951.17	Adar	chr3	protein_coding	adenosine deaminase, RNA-specific
chr3	89638145	89642149	+	89622457	89642149	A5SS	0.33	50	50	ENSMUST00000098924.9	ENSMUSG00000027951.17	Adar	chr3	protein_coding	adenosine deaminase, RNA-specific
chr3	89638145	89645297	+	89643580	89645297	A5SS&ES	0.5	50	50	ENSMUST00000098924.9	ENSMUSG00000027951.17	Adar	chr3	protein_coding	adenosine deaminase, RNA-specific
chr3	89652830	89653127	+	89652908	89653127	A5SS	0.5	50	50	ENSMUST00000098924.9	ENSMUSG00000027951.17	Adar	chr3	protein_coding	adenosine deaminase, RNA-specific
chr3	89638145	89642149	+	89622845	89642149	A5SS	0.33	50	50	ENSMUST00000123691.2	ENSMUSG00000027951.17	Adar	chr3	protein_coding	adenosine deaminase, RNA-specific
chr3	89638145	89645297	+	89638145;89643580	89642149;89645297	ES	0.5	50	50	ENSMUST00000029563.14	ENSMUSG00000027951.17	Adar	chr3	protein_coding	adenosine deaminase, RNA-specific
chr3	89638145	89642149	+	89638145	89645297	A3SS	0.5	50	50	ENSMUST00000121094.8	ENSMUSG00000027951.17	Adar	chr3	protein_coding	adenosine deaminase, RNA-specific
chr3	89664577	89667979	-	89655446	89667979	A3SS	0.5	50	50	ENSMUST00000200558.5	ENSMUSG00000027950.8	Chrnb2	chr3	protein_coding	cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal)
chr3	89786202	89793209	-	89786199	89793209	A3SS	0.5	50	50	ENSMUST00000197679.5	ENSMUSG00000027947.12	Il6ra	chr3	protein_coding	interleukin 6 receptor, alpha
chr3	89848738	89850637	-	89848738;89849112	89848982;89850637	ES	0.5	50	50	ENSMUST00000069805.14	ENSMUSG00000060671.13	Atp8b2	chr3	protein_coding	ATPase, class I, type 8B, member 2
chr3	89854096	89855354	-	89854096;89855226	89855111;89855354	ES	0.5	50	50	ENSMUST00000069805.14	ENSMUSG00000060671.13	Atp8b2	chr3	protein_coding	ATPase, class I, type 8B, member 2
chr3	89866356	89868382	-	89866356	89867592	5pMXE	0.33	50	50	ENSMUST00000069805.14	ENSMUSG00000060671.13	Atp8b2	chr3	protein_coding	ATPase, class I, type 8B, member 2
chr3	89853444	89853486	-	89853372	89853486	A3SS	0.5	50	50	ENSMUST00000069805.14	ENSMUSG00000060671.13	Atp8b2	chr3	protein_coding	ATPase, class I, type 8B, member 2
chr3	89853585	89853735	-	89853591	89853735	A3SS	0.5	50	50	ENSMUST00000069805.14	ENSMUSG00000060671.13	Atp8b2	chr3	protein_coding	ATPase, class I, type 8B, member 2
chr3	89866356	89866815	-	89866356	89867592	A5SS	0.33	50	50	ENSMUST00000069805.14	ENSMUSG00000060671.13	Atp8b2	chr3	protein_coding	ATPase, class I, type 8B, member 2
chr3	89866356;89867728	89867592;89868382	-	89866356	89868382	cassetteExon	0.5	100	100	ENSMUST00000107396.8	ENSMUSG00000060671.13	Atp8b2	chr3	protein_coding	ATPase, class I, type 8B, member 2
chr3	89866356	89866815	-	89866356	89868382	A5SS	0.33	50	50	ENSMUST00000107396.8	ENSMUSG00000060671.13	Atp8b2	chr3	protein_coding	ATPase, class I, type 8B, member 2
chr3	89868448	89869095	-	89868448	89870464	A5SS	0.33	50	50	ENSMUST00000107396.8	ENSMUSG00000060671.13	Atp8b2	chr3	protein_coding	ATPase, class I, type 8B, member 2
chr3	89868448	89870335	-	89868448	89870464	A5SS	0.33	50	50	ENSMUST00000107396.8	ENSMUSG00000060671.13	Atp8b2	chr3	protein_coding	ATPase, class I, type 8B, member 2
chr3	89854096	89855354	-	89854096	89855111	A5SS	0.5	50	50	ENSMUST00000167257.2	ENSMUSG00000060671.13	Atp8b2	chr3	protein_coding	ATPase, class I, type 8B, member 2
chr3	89868448	89869095	-	89868448	89870335	A5SS	0.33	50	50	ENSMUST00000168880.8	ENSMUSG00000060671.13	Atp8b2	chr3	protein_coding	ATPase, class I, type 8B, member 2
chr3	89903211	89903554	-	89903211;89903424	89903318;89903554	ES	0.5	50	50	ENSMUST00000079724.9	ENSMUSG00000027944.14	Hax1	chr3	protein_coding	HCLS1 associated X-1
chr3	89904881	89905835	-	89904881;89905310	89905045;89905835	ES	0.33	50	50	ENSMUST00000079724.9	ENSMUSG00000027944.14	Hax1	chr3	protein_coding	HCLS1 associated X-1
chr3	89904872	89905045	-	89904881	89905045	A3SS	0.5	50	50	ENSMUST00000079724.9	ENSMUSG00000027944.14	Hax1	chr3	protein_coding	HCLS1 associated X-1
chr3	89905410	89905835	-	89905310	89905835	A3SS	0.33	50	50	ENSMUST00000079724.9	ENSMUSG00000027944.14	Hax1	chr3	protein_coding	HCLS1 associated X-1
chr3	89903605	89905109	-	89903605	89904694	A5SS&ES	0.5	50	50	ENSMUST00000079724.9	ENSMUSG00000027944.14	Hax1	chr3	protein_coding	HCLS1 associated X-1
chr3	89905310	89905632	-	89905310	89905835	A5SS	0.5	50	50	ENSMUST00000079724.9	ENSMUSG00000027944.14	Hax1	chr3	protein_coding	HCLS1 associated X-1
chr3	89904881	89905835	-	89905310	89905835	A3SS&ES	0.33	50	50	ENSMUST00000197767.5	ENSMUSG00000027944.14	Hax1	chr3	protein_coding	HCLS1 associated X-1
chr3	89903605;89904881	89904694;89905835	-	89903605;89905310	89905109;89905835	MXE	0.5	100	100	ENSMUST00000197786.5	ENSMUSG00000027944.14	Hax1	chr3	protein_coding	HCLS1 associated X-1
chr3	89903605;89905410	89905109;89905835	-	89903605;89904881	89904694;89905835	MXE	0.5	100	100	ENSMUST00000197725.5	ENSMUSG00000027944.14	Hax1	chr3	protein_coding	HCLS1 associated X-1
chr3	89904881;89905410	89905045;89905835	-	89904881	89905835	cassetteExon	0.5	100	100	ENSMUST00000197725.5	ENSMUSG00000027944.14	Hax1	chr3	protein_coding	HCLS1 associated X-1
chr3	89905410	89905632	-	89905310	89905632	A3SS	0.5	50	50	ENSMUST00000198782.2	ENSMUSG00000027944.14	Hax1	chr3	protein_coding	HCLS1 associated X-1
chr3	89903211	89903554	-	89903211	89903318	A5SS	0.5	50	50	ENSMUST00000198889.2	ENSMUSG00000027944.14	Hax1	chr3	protein_coding	HCLS1 associated X-1
chr3	89905410	89905632	-	89905410	89905835	A5SS	0.5	50	50	ENSMUST00000199163.2	ENSMUSG00000027944.14	Hax1	chr3	protein_coding	HCLS1 associated X-1
chr3	89904881	89905835	-	89905410	89905835	A3SS	0.33	50	50	ENSMUST00000199469.2	ENSMUSG00000027944.14	Hax1	chr3	protein_coding	HCLS1 associated X-1
chr3	89955206	89959891	-	89955206	89959697	5pMXE	0.2	50	50	ENSMUST00000198322.5	ENSMUSG00000042520.17	Ubap2l	chr3	protein_coding	ubiquitin-associated protein 2-like
chr3	89907560;89909175	89909125;89909586	-	89907560	89909586	cassetteExon	0.5	100	100	ENSMUST00000198322.5	ENSMUSG00000042520.17	Ubap2l	chr3	protein_coding	ubiquitin-associated protein 2-like
chr3	89935684;89938677	89938603;89941372	-	89935684	89941372	cassetteExon	0.5	100	100	ENSMUST00000198322.5	ENSMUSG00000042520.17	Ubap2l	chr3	protein_coding	ubiquitin-associated protein 2-like
chr3	89935684;89938677	89938618;89941372	-	89935684	89941372	cassetteExon	0.5	100	100	ENSMUST00000198322.5	ENSMUSG00000042520.17	Ubap2l	chr3	protein_coding	ubiquitin-associated protein 2-like
chr3	89908298	89909586	-	89907560	89909586	A3SS	0.33	50	50	ENSMUST00000198322.5	ENSMUSG00000042520.17	Ubap2l	chr3	protein_coding	ubiquitin-associated protein 2-like
chr3	89909783	89910552	-	89909780	89910552	A3SS	0.5	50	50	ENSMUST00000198322.5	ENSMUSG00000042520.17	Ubap2l	chr3	protein_coding	ubiquitin-associated protein 2-like
chr3	89913924	89915563	-	89910619	89915563	A3SS	0.5	50	50	ENSMUST00000198322.5	ENSMUSG00000042520.17	Ubap2l	chr3	protein_coding	ubiquitin-associated protein 2-like
chr3	89945772	89946122	-	89945772	89946155	A5SS	0.5	50	50	ENSMUST00000198322.5	ENSMUSG00000042520.17	Ubap2l	chr3	protein_coding	ubiquitin-associated protein 2-like
chr3	89955206	89959336	-	89955206	89959697	A5SS	0.2	50	50	ENSMUST00000198322.5	ENSMUSG00000042520.17	Ubap2l	chr3	protein_coding	ubiquitin-associated protein 2-like
chr3	89955206	89959612	-	89955206	89959697	A5SS	0.2	50	50	ENSMUST00000198322.5	ENSMUSG00000042520.17	Ubap2l	chr3	protein_coding	ubiquitin-associated protein 2-like
chr3	89955206	89959762	-	89955206	89959697	A5SS	0.2	50	50	ENSMUST00000198322.5	ENSMUSG00000042520.17	Ubap2l	chr3	protein_coding	ubiquitin-associated protein 2-like
chr3	89908298	89909125	-	89907560	89909125	A3SS	0.5	50	50	ENSMUST00000029553.16	ENSMUSG00000042520.17	Ubap2l	chr3	protein_coding	ubiquitin-associated protein 2-like
chr3	89908298	89909586	-	89909175	89909586	A3SS&ES	0.33	50	50	ENSMUST00000029553.16	ENSMUSG00000042520.17	Ubap2l	chr3	protein_coding	ubiquitin-associated protein 2-like
chr3	89935684	89938603	-	89935684	89938618	A5SS	0.33	50	50	ENSMUST00000029553.16	ENSMUSG00000042520.17	Ubap2l	chr3	protein_coding	ubiquitin-associated protein 2-like
chr3	89908298;89909175	89909125;89909586	-	89908298	89909586	cassetteExon	0.5	100	100	ENSMUST00000064639.15	ENSMUSG00000042520.17	Ubap2l	chr3	protein_coding	ubiquitin-associated protein 2-like
chr3	89955206	89959891	-	89955206	89959762	5pMXE	0.2	50	50	ENSMUST00000196843.5	ENSMUSG00000042520.17	Ubap2l	chr3	protein_coding	ubiquitin-associated protein 2-like
chr3	89955206	89959336	-	89955206	89959762	A5SS	0.2	50	50	ENSMUST00000196843.5	ENSMUSG00000042520.17	Ubap2l	chr3	protein_coding	ubiquitin-associated protein 2-like
chr3	89955206	89959612	-	89955206	89959762	A5SS	0.2	50	50	ENSMUST00000196843.5	ENSMUSG00000042520.17	Ubap2l	chr3	protein_coding	ubiquitin-associated protein 2-like
chr3	89955206	89959891	-	89955206	89959612	5pMXE	0.2	50	50	ENSMUST00000196568.5	ENSMUSG00000042520.17	Ubap2l	chr3	protein_coding	ubiquitin-associated protein 2-like
chr3	89955206	89959336	-	89955206	89959612	A5SS	0.2	50	50	ENSMUST00000196568.5	ENSMUSG00000042520.17	Ubap2l	chr3	protein_coding	ubiquitin-associated protein 2-like
chr3	89955206	89959891	-	89955206	89959336	5pMXE	0.2	50	50	ENSMUST00000196633.5	ENSMUSG00000042520.17	Ubap2l	chr3	protein_coding	ubiquitin-associated protein 2-like
chr3	89960916	89963836	+	89960916;89963631	89963514;89963836	ES	0.5	50	50	ENSMUST00000159064.8	ENSMUSG00000027942.18	4933434E20Rik	chr3	protein_coding	RIKEN cDNA 4933434E20 gene
chr3	89963631	89965792	+	89963631;89963889	89963836;89965792	ES	0.33	50	50	ENSMUST00000159064.8	ENSMUSG00000027942.18	4933434E20Rik	chr3	protein_coding	RIKEN cDNA 4933434E20 gene
chr3	89966107	89967669	+	89966107	89968945	A3SS	0.5	50	50	ENSMUST00000159064.8	ENSMUSG00000027942.18	4933434E20Rik	chr3	protein_coding	RIKEN cDNA 4933434E20 gene
chr3	89960916	89965792	+	89960916;89963889	89963836;89965792	ES	0.33	50	50	ENSMUST00000159202.8	ENSMUSG00000027942.18	4933434E20Rik	chr3	protein_coding	RIKEN cDNA 4933434E20 gene
chr3	89960916;89963631	89963514;89965792	+	89960916;89963889	89963836;89965792	MXE	0.5	100	100	ENSMUST00000159202.8	ENSMUSG00000027942.18	4933434E20Rik	chr3	protein_coding	RIKEN cDNA 4933434E20 gene
chr3	89960916	89965792	+	89960916;89963631	89963514;89965792	ES	0.33	50	50	ENSMUST00000068798.13	ENSMUSG00000027942.18	4933434E20Rik	chr3	protein_coding	RIKEN cDNA 4933434E20 gene
chr3	89960916;89963889	89963514;89965792	+	89960916	89965792	cassetteExon	0.5	100	100	ENSMUST00000161918.3	ENSMUSG00000027942.18	4933434E20Rik	chr3	protein_coding	RIKEN cDNA 4933434E20 gene
chr3	89970190	89970516	+	89969239	89970516	A5SS	0.5	50	50	ENSMUST00000239076.2	ENSMUSG00000118504.2	Gm53012	chr3	protein_coding	predicted gene, 53012
chr3	89998398	90005682	+	89998398	89999238	3pMXE	0.33	50	50	ENSMUST00000121503.8	ENSMUSG00000027940.19	Tpm3	chr3	protein_coding	tropomyosin 3, gamma
chr3	89998398	90006835	+	89998398	89999238	3pMXE	0.33	50	50	ENSMUST00000121503.8	ENSMUSG00000027940.19	Tpm3	chr3	protein_coding	tropomyosin 3, gamma
chr3	89995051;89995783	89995708;89997104	+	89995051;89996430	89996355;89997104	MXE	0.5	100	100	ENSMUST00000121503.8	ENSMUSG00000027940.19	Tpm3	chr3	protein_coding	tropomyosin 3, gamma
chr3	89995051;89995788	89995708;89997104	+	89995051;89996430	89996355;89997104	MXE	0.5	100	100	ENSMUST00000121503.8	ENSMUSG00000027940.19	Tpm3	chr3	protein_coding	tropomyosin 3, gamma
chr3	89987170	89993753	+	89981152	89993753	A5SS	0.25	50	50	ENSMUST00000121503.8	ENSMUSG00000027940.19	Tpm3	chr3	protein_coding	tropomyosin 3, gamma
chr3	89987303	89993753	+	89981152	89993753	A5SS	0.25	50	50	ENSMUST00000121503.8	ENSMUSG00000027940.19	Tpm3	chr3	protein_coding	tropomyosin 3, gamma
chr3	89987924	89993753	+	89981152	89993753	A5SS	0.25	50	50	ENSMUST00000121503.8	ENSMUSG00000027940.19	Tpm3	chr3	protein_coding	tropomyosin 3, gamma
chr3	89997386;89998398	89998320;90006835	+	89997386	90006835	cassetteExon	0.5	100	100	ENSMUST00000119570.8	ENSMUSG00000027940.19	Tpm3	chr3	protein_coding	tropomyosin 3, gamma
chr3	89997386	90005682	+	89997386	90006835	A3SS	0.33	50	50	ENSMUST00000119570.8	ENSMUSG00000027940.19	Tpm3	chr3	protein_coding	tropomyosin 3, gamma
chr3	89995788	89997104	+	89995783	89997104	A5SS	0.33	50	50	ENSMUST00000119570.8	ENSMUSG00000027940.19	Tpm3	chr3	protein_coding	tropomyosin 3, gamma
chr3	89987303	89993753	+	89987170	89993753	A5SS	0.25	50	50	ENSMUST00000029549.16	ENSMUSG00000027940.19	Tpm3	chr3	protein_coding	tropomyosin 3, gamma
chr3	89987924	89993753	+	89987170	89993753	A5SS	0.25	50	50	ENSMUST00000029549.16	ENSMUSG00000027940.19	Tpm3	chr3	protein_coding	tropomyosin 3, gamma
chr3	89997386	90005682	+	89997386	89998320	A3SS&ES	0.33	50	50	ENSMUST00000118566.8	ENSMUSG00000027940.19	Tpm3	chr3	protein_coding	tropomyosin 3, gamma
chr3	89998398	90005682	+	89998398	90006835	A3SS	0.33	50	50	ENSMUST00000118566.8	ENSMUSG00000027940.19	Tpm3	chr3	protein_coding	tropomyosin 3, gamma
chr3	89997386;89998398	89998320;90005682	+	89997386	90005682	cassetteExon	0.5	100	100	ENSMUST00000119158.8	ENSMUSG00000027940.19	Tpm3	chr3	protein_coding	tropomyosin 3, gamma
chr3	89995051	89995708	+	89995051	89996355	A3SS	0.5	50	50	ENSMUST00000149432.8	ENSMUSG00000027940.19	Tpm3	chr3	protein_coding	tropomyosin 3, gamma
chr3	89987924	89993753	+	89987303	89993753	A5SS	0.25	50	50	ENSMUST00000149432.8	ENSMUSG00000027940.19	Tpm3	chr3	protein_coding	tropomyosin 3, gamma
chr3	89996430	89997104	+	89995783	89997104	A5SS	0.33	50	50	ENSMUST00000149734.2	ENSMUSG00000027940.19	Tpm3	chr3	protein_coding	tropomyosin 3, gamma
chr3	90120047	90120241	-	90120060	90120241	A3SS	0.5	50	50	ENSMUST00000196205.5	ENSMUSG00000090733.7	Rps27	chr3	protein_coding	ribosomal protein S27
chr3	90120608	90120917	-	90120805	90120917	A3SS	0.33	50	50	ENSMUST00000197028.5	ENSMUSG00000090733.7	Rps27	chr3	protein_coding	ribosomal protein S27
chr3	90120800	90120917	-	90120805	90120917	A3SS	0.33	50	50	ENSMUST00000197028.5	ENSMUSG00000090733.7	Rps27	chr3	protein_coding	ribosomal protein S27
chr3	90120608	90120917	-	90120608;90120800	90120688;90120917	ES	0.33	50	50	ENSMUST00000195998.5	ENSMUSG00000090733.7	Rps27	chr3	protein_coding	ribosomal protein S27
chr3	90120608	90120917	-	90120608	90120688	A5SS	0.5	50	50	ENSMUST00000200305.2	ENSMUSG00000090733.7	Rps27	chr3	protein_coding	ribosomal protein S27
chr3	90120608;90120805	90120688;90120917	-	90120608	90120917	cassetteExon	0.5	100	100	ENSMUST00000197361.5	ENSMUSG00000090733.7	Rps27	chr3	protein_coding	ribosomal protein S27
chr3	90128329	90129544	+	90121129	90129544	A5SS	0.5	50	50	ENSMUST00000107373.8	ENSMUSG00000027935.15	Rab13	chr3	protein_coding	RAB13, member RAS oncogene family
chr3	90141309	90142604	+	90141309	90142690	A3SS	0.33	50	50	ENSMUST00000029546.15	ENSMUSG00000027937.16	Jtb	chr3	protein_coding	jumping translocation breakpoint
chr3	90141309	90142691	+	90141309	90142690	A3SS	0.33	50	50	ENSMUST00000029546.15	ENSMUSG00000027937.16	Jtb	chr3	protein_coding	jumping translocation breakpoint
chr3	90141309	90142691	+	90141309	90142604	A3SS	0.33	50	50	ENSMUST00000119304.2	ENSMUSG00000027937.16	Jtb	chr3	protein_coding	jumping translocation breakpoint
chr3	90150143	90150325	-	90150143	90150615	A5SS	0.5	50	50	ENSMUST00000029547.10	ENSMUSG00000027938.12	Creb3l4	chr3	protein_coding	cAMP responsive element binding protein 3-like 4
chr3	90167677	90169758	+	90167677;90168410	90168004;90169758	ES	0.5	50	50	ENSMUST00000029545.15	ENSMUSG00000027936.19	Crtc2	chr3	protein_coding	CREB regulated transcription coactivator 2
chr3	90170021;90170287	90170221;90170478	+	90170021	90170478	cassetteExon	0.5	100	100	ENSMUST00000029545.15	ENSMUSG00000027936.19	Crtc2	chr3	protein_coding	CREB regulated transcription coactivator 2
chr3	90161865	90166693	+	90161865	90164424	A3SS&ES	0.5	50	50	ENSMUST00000149422.8	ENSMUSG00000027936.19	Crtc2	chr3	protein_coding	CREB regulated transcription coactivator 2
chr3	90166529	90166693	+	90161865	90166693	A5SS	0.5	50	50	ENSMUST00000136970.8	ENSMUSG00000027936.19	Crtc2	chr3	protein_coding	CREB regulated transcription coactivator 2
chr3	90176124	90176562	+	90176124	90176295	A3SS&ES	0.5	50	50	ENSMUST00000129564.8	ENSMUSG00000042404.17	Dennd4b	chr3	protein_coding	DENN/MADD domain containing 4B
chr3	90183697	90184193	+	90183697	90184187	A3SS	0.5	50	50	ENSMUST00000129564.8	ENSMUSG00000042404.17	Dennd4b	chr3	protein_coding	DENN/MADD domain containing 4B
chr3	90173973	90174720	+	90172868	90174720	A5SS	0.5	50	50	ENSMUST00000129564.8	ENSMUSG00000042404.17	Dennd4b	chr3	protein_coding	DENN/MADD domain containing 4B
chr3	90177435	90177520	+	90177428	90177520	A5SS	0.5	50	50	ENSMUST00000129564.8	ENSMUSG00000042404.17	Dennd4b	chr3	protein_coding	DENN/MADD domain containing 4B
chr3	90200731;90231401	90231349;90248963	+	90200731	90248963	cassetteExon	0.5	100	100	ENSMUST00000199754.5	ENSMUSG00000042390.10	Gatad2b	chr3	protein_coding	GATA zinc finger domain containing 2B
chr3	90258881	90259124	+	90258881	90259121	A3SS	0.5	50	50	ENSMUST00000199754.5	ENSMUSG00000042390.10	Gatad2b	chr3	protein_coding	GATA zinc finger domain containing 2B
chr3	90201650	90248963	+	90200731	90248963	A5SS	0.33	50	50	ENSMUST00000199754.5	ENSMUSG00000042390.10	Gatad2b	chr3	protein_coding	GATA zinc finger domain containing 2B
chr3	90258833	90259121	+	90258881	90259121	A5SS	0.5	50	50	ENSMUST00000199754.5	ENSMUSG00000042390.10	Gatad2b	chr3	protein_coding	GATA zinc finger domain containing 2B
chr3	90201650	90248963	+	90231401	90248963	A5SS&ES	0.33	50	50	ENSMUST00000200373.5	ENSMUSG00000042390.10	Gatad2b	chr3	protein_coding	GATA zinc finger domain containing 2B
chr3	90295793	90296479	-	90295793;90296206	90295997;90296479	ES	0.33	50	50	ENSMUST00000029541.12	ENSMUSG00000027932.15	Slc27a3	chr3	protein_coding	solute carrier family 27 (fatty acid transporter), member 3
chr3	90296228	90296479	-	90296206	90296479	A3SS	0.33	50	50	ENSMUST00000029541.12	ENSMUSG00000027932.15	Slc27a3	chr3	protein_coding	solute carrier family 27 (fatty acid transporter), member 3
chr3	90295793	90296479	-	90295793;90296228	90295997;90296479	ES	0.33	50	50	ENSMUST00000132041.2	ENSMUSG00000027932.15	Slc27a3	chr3	protein_coding	solute carrier family 27 (fatty acid transporter), member 3
chr3	90295793	90296479	-	90295793	90295997	5pMXE	0.5	50	50	ENSMUST00000153978.2	ENSMUSG00000027932.15	Slc27a3	chr3	protein_coding	solute carrier family 27 (fatty acid transporter), member 3
chr3	90299449	90299519	-	90299412	90299519	A3SS	0.5	50	50	ENSMUST00000071488.8	ENSMUSG00000027933.12	Ints3	chr3	protein_coding	integrator complex subunit 3
chr3	90364322	90364628	-	90364384	90364628	A3SS	0.5	50	50	ENSMUST00000029540.13	ENSMUSG00000027931.13	Npr1	chr3	protein_coding	natriuretic peptide receptor 1
chr3	90365728	90365939	-	90365700	90365939	A3SS	0.5	50	50	ENSMUST00000029540.13	ENSMUSG00000027931.13	Npr1	chr3	protein_coding	natriuretic peptide receptor 1
chr3	90366802	90368397	-	90367360	90368397	A3SS&ES	0.5	50	50	ENSMUST00000029540.13	ENSMUSG00000027931.13	Npr1	chr3	protein_coding	natriuretic peptide receptor 1
chr3	90364783	90365375	-	90364783	90365379	A5SS	0.5	50	50	ENSMUST00000029540.13	ENSMUSG00000027931.13	Npr1	chr3	protein_coding	natriuretic peptide receptor 1
chr3	90397579	90398139	-	90397579;90397901	90397855;90398139	ES	0.5	50	50	ENSMUST00000149884.2	ENSMUSG00000001018.16	Snapin	chr3	protein_coding	SNAP-associated protein
chr3	90397901	90398144	-	90397901	90398139	A5SS	0.5	50	50	ENSMUST00000149884.2	ENSMUSG00000001018.16	Snapin	chr3	protein_coding	SNAP-associated protein
chr3	90397579	90398139	-	90397579	90397855	A5SS&ES	0.5	50	50	ENSMUST00000184877.8	ENSMUSG00000001018.16	Snapin	chr3	protein_coding	SNAP-associated protein
chr3	90407414;90409560	90409423;90410403	-	90407414	90410403	cassetteExon	0.5	100	100	ENSMUST00000107343.8	ENSMUSG00000001017.16	Chtop	chr3	protein_coding	chromatin target of PRMT1
chr3	90410589;90412785	90412702;90413415	-	90410589	90413415	cassetteExon	0.5	100	100	ENSMUST00000107343.8	ENSMUSG00000001017.16	Chtop	chr3	protein_coding	chromatin target of PRMT1
chr3	90410586	90413415	-	90410589	90413415	A3SS	0.33	50	50	ENSMUST00000107343.8	ENSMUSG00000001017.16	Chtop	chr3	protein_coding	chromatin target of PRMT1
chr3	90414933	90416081	-	90414933	90416498	A5SS	0.5	50	50	ENSMUST00000107343.8	ENSMUSG00000001017.16	Chtop	chr3	protein_coding	chromatin target of PRMT1
chr3	90413568	90414852	-	90414565	90414852	A3SS	0.5	50	50	ENSMUST00000107344.8	ENSMUSG00000001017.16	Chtop	chr3	protein_coding	chromatin target of PRMT1
chr3	90412785	90413415	-	90410586	90413415	A3SS	0.33	50	50	ENSMUST00000076639.11	ENSMUSG00000001017.16	Chtop	chr3	protein_coding	chromatin target of PRMT1
chr3	90407414	90410403	-	90409560	90410403	3pMXE	0.5	50	50	ENSMUST00000146740.8	ENSMUSG00000001017.16	Chtop	chr3	protein_coding	chromatin target of PRMT1
chr3	90418671	90419286	-	90418671	90419303	A5SS	0.5	50	50	ENSMUST00000060738.9	ENSMUSG00000044080.10	S100a1	chr3	protein_coding	S100 calcium binding protein A1
chr3	90434600	90435385	+	90434600;90435167	90435021;90435385	ES	0.5	50	50	ENSMUST00000199538.5	ENSMUSG00000042306.12	S100a14	chr3	protein_coding	S100 calcium binding protein A14
chr3	90434206	90434479	+	90434206	90434462	A3SS	0.5	50	50	ENSMUST00000199538.5	ENSMUSG00000042306.12	S100a14	chr3	protein_coding	S100 calcium binding protein A14
chr3	90444724	90449672	+	90444724;90449479	90449301;90449672	ES	0.5	50	50	ENSMUST00000098911.10	ENSMUSG00000074457.11	S100a16	chr3	protein_coding	S100 calcium binding protein A16
chr3	90444724	90449307	+	90444724	90449301	A3SS	0.33	50	50	ENSMUST00000098911.10	ENSMUSG00000074457.11	S100a16	chr3	protein_coding	S100 calcium binding protein A16
chr3	90446328	90449301	+	90444724	90449301	A5SS	0.16	50	50	ENSMUST00000098911.10	ENSMUSG00000074457.11	S100a16	chr3	protein_coding	S100 calcium binding protein A16
chr3	90446772	90449301	+	90444724	90449301	A5SS	0.16	50	50	ENSMUST00000098911.10	ENSMUSG00000074457.11	S100a16	chr3	protein_coding	S100 calcium binding protein A16
chr3	90448497	90449301	+	90444724	90449301	A5SS	0.16	50	50	ENSMUST00000098911.10	ENSMUSG00000074457.11	S100a16	chr3	protein_coding	S100 calcium binding protein A16
chr3	90448501	90449301	+	90444724	90449301	A5SS	0.16	50	50	ENSMUST00000098911.10	ENSMUSG00000074457.11	S100a16	chr3	protein_coding	S100 calcium binding protein A16
chr3	90448624	90449301	+	90444724	90449301	A5SS	0.16	50	50	ENSMUST00000098911.10	ENSMUSG00000074457.11	S100a16	chr3	protein_coding	S100 calcium binding protein A16
chr3	90444724	90449672	+	90444724;90449479	90449307;90449672	ES	0.5	50	50	ENSMUST00000107335.2	ENSMUSG00000074457.11	S100a16	chr3	protein_coding	S100 calcium binding protein A16
chr3	90446772	90449301	+	90446328	90449301	A5SS	0.16	50	50	ENSMUST00000107334.8	ENSMUSG00000074457.11	S100a16	chr3	protein_coding	S100 calcium binding protein A16
chr3	90448497	90449301	+	90446328	90449301	A5SS	0.16	50	50	ENSMUST00000107334.8	ENSMUSG00000074457.11	S100a16	chr3	protein_coding	S100 calcium binding protein A16
chr3	90448501	90449301	+	90446328	90449301	A5SS	0.16	50	50	ENSMUST00000107334.8	ENSMUSG00000074457.11	S100a16	chr3	protein_coding	S100 calcium binding protein A16
chr3	90448624	90449301	+	90446328	90449301	A5SS	0.16	50	50	ENSMUST00000107334.8	ENSMUSG00000074457.11	S100a16	chr3	protein_coding	S100 calcium binding protein A16
chr3	90448497	90449301	+	90446772	90449301	A5SS	0.16	50	50	ENSMUST00000150833.8	ENSMUSG00000074457.11	S100a16	chr3	protein_coding	S100 calcium binding protein A16
chr3	90448501	90449301	+	90446772	90449301	A5SS	0.16	50	50	ENSMUST00000150833.8	ENSMUSG00000074457.11	S100a16	chr3	protein_coding	S100 calcium binding protein A16
chr3	90448624	90449301	+	90446772	90449301	A5SS	0.16	50	50	ENSMUST00000150833.8	ENSMUSG00000074457.11	S100a16	chr3	protein_coding	S100 calcium binding protein A16
chr3	90448501	90449301	+	90448497	90449301	A5SS	0.16	50	50	ENSMUST00000107333.8	ENSMUSG00000074457.11	S100a16	chr3	protein_coding	S100 calcium binding protein A16
chr3	90448624	90449301	+	90448497	90449301	A5SS	0.16	50	50	ENSMUST00000107333.8	ENSMUSG00000074457.11	S100a16	chr3	protein_coding	S100 calcium binding protein A16
chr3	90448624	90449301	+	90448501	90449301	A5SS	0.16	50	50	ENSMUST00000107331.8	ENSMUSG00000074457.11	S100a16	chr3	protein_coding	S100 calcium binding protein A16
chr3	90497661	90498609	+	90490333	90498609	A5SS	0.5	50	50	ENSMUST00000238700.2	ENSMUSG00000094018.3	S100a2	chr3	protein_coding	S100 calcium binding protein A2
chr3	90494287	90509087	+	90492118	90509087	A5SS	0.33	50	50	ENSMUST00000200508.5	ENSMUSG00000001021.14	S100a3	chr3	protein_coding	S100 calcium binding protein A3
chr3	90507575	90509087	+	90492118	90509087	A5SS	0.33	50	50	ENSMUST00000200508.5	ENSMUSG00000001021.14	S100a3	chr3	protein_coding	S100 calcium binding protein A3
chr3	90507575	90509087	+	90494287	90509087	A5SS	0.33	50	50	ENSMUST00000200290.5	ENSMUSG00000001021.14	S100a3	chr3	protein_coding	S100 calcium binding protein A3
chr3	90511113	90512304	+	90509619	90512304	A5SS	0.5	50	50	ENSMUST00000107330.3	ENSMUSG00000105518.2	Gm42674	chr3	protein_coding	predicted gene 42674
chr3	90520689	90521050	+	90520533	90521050	A5SS	0.5	50	50	ENSMUST00000001051.9	ENSMUSG00000001025.9	S100a6	chr3	protein_coding	S100 calcium binding protein A6 (calcyclin)
chr3	90602601	90602975	-	90602604	90602975	A3SS	0.5	50	50	ENSMUST00000069960.12	ENSMUSG00000056071.13	S100a9	chr3	protein_coding	S100 calcium binding protein A9 (calgranulin B)
chr3	90640379	90642752	+	90640379	90642749	A3SS	0.5	50	50	ENSMUST00000169698.8	ENSMUSG00000042250.14	Pglyrp4	chr3	protein_coding	peptidoglycan recognition protein 4
chr3	90645578	90646298	+	90642950	90646298	A5SS	0.5	50	50	ENSMUST00000169698.8	ENSMUSG00000042250.14	Pglyrp4	chr3	protein_coding	peptidoglycan recognition protein 4
chr3	92043068	92049960	-	92018148	92049960	A3SS	0.5	50	50	ENSMUST00000197811.2	ENSMUSG00000104791.2	4930511M18Rik	chr3	lncRNA	RIKEN cDNA 4930511M18 gene
chr3	92123269	92161193	+	92123269	92126380	3pMXE	0.5	50	50	ENSMUST00000074449.7	ENSMUSG00000078664.3	Sprr2a1	chr3	protein_coding	small proline-rich protein 2A1
chr3	92158081	92161193	+	92123269	92161193	A5SS	0.5	50	50	ENSMUST00000090871.3	ENSMUSG00000068893.6	Sprr2a2	chr3	protein_coding	small proline-rich protein 2A2
chr3	92491865	92496136	-	92491865	92493460	5pMXE	0.5	50	50	ENSMUST00000194965.6	ENSMUSG00000074435.11	Smcp	chr3	protein_coding	sperm mitochondria-associated cysteine-rich protein
chr3	92922157;92922657	92922584;92922923	-	92922157	92922923	cassetteExon	0.5	100	100	ENSMUST00000029521.5	ENSMUSG00000027913.6	Crct1	chr3	protein_coding	cysteine-rich C-terminal 1
chr3	92925946	92926249	-	92925946	92926324	A5SS	0.5	50	50	ENSMUST00000029520.9	ENSMUSG00000027912.9	Lce1m	chr3	protein_coding	late cornified envelope 1M
chr3	93055903	93056916	+	93056804	93056916	A5SS	0.5	50	50	ENSMUST00000195515.2	ENSMUSG00000078657.7	Crnn	chr3	protein_coding	cornulin
chr3	93468150	93468251	+	93462518	93468251	A5SS	0.5	50	50	ENSMUST00000045756.14	ENSMUSG00000041959.15	S100a10	chr3	protein_coding	S100 calcium binding protein A10 (calpactin)
chr3	94296903	94297707	+	94296903	94298381	A3SS	0.33	50	50	ENSMUST00000029795.10	ENSMUSG00000028150.15	Rorc	chr3	protein_coding	RAR-related orphan receptor gamma
chr3	94284910	94294428	+	94282371	94294428	A5SS	0.33	50	50	ENSMUST00000029795.10	ENSMUSG00000028150.15	Rorc	chr3	protein_coding	RAR-related orphan receptor gamma
chr3	94291631	94294428	+	94282371	94294428	A5SS	0.33	50	50	ENSMUST00000029795.10	ENSMUSG00000028150.15	Rorc	chr3	protein_coding	RAR-related orphan receptor gamma
chr3	94284910;94291631	94291491;94294428	+	94284910	94294428	cassetteExon	0.5	100	100	ENSMUST00000197040.5	ENSMUSG00000028150.15	Rorc	chr3	protein_coding	RAR-related orphan receptor gamma
chr3	94296903	94297707	+	94296903	94304499	A3SS	0.33	50	50	ENSMUST00000200009.2	ENSMUSG00000028150.15	Rorc	chr3	protein_coding	RAR-related orphan receptor gamma
chr3	94296903	94298381	+	94296903	94304499	A3SS	0.33	50	50	ENSMUST00000200009.2	ENSMUSG00000028150.15	Rorc	chr3	protein_coding	RAR-related orphan receptor gamma
chr3	94300447	94304499	+	94296903	94304499	A5SS	0.5	50	50	ENSMUST00000200009.2	ENSMUSG00000028150.15	Rorc	chr3	protein_coding	RAR-related orphan receptor gamma
chr3	94330258	94331808	+	94330258;94331108	94331002;94331808	ES	0.5	50	50	ENSMUST00000166032.8	ENSMUSG00000041912.13	Tdrkh	chr3	protein_coding	tudor and KH domain containing protein
chr3	94331108	94331820	+	94331108	94331808	A3SS	0.5	50	50	ENSMUST00000166032.8	ENSMUSG00000041912.13	Tdrkh	chr3	protein_coding	tudor and KH domain containing protein
chr3	94320675	94330109	+	94320669	94330109	A5SS	0.5	50	50	ENSMUST00000166032.8	ENSMUSG00000041912.13	Tdrkh	chr3	protein_coding	tudor and KH domain containing protein
chr3	94331897	94332870	+	94331997	94332870	A5SS	0.5	50	50	ENSMUST00000166032.8	ENSMUSG00000041912.13	Tdrkh	chr3	protein_coding	tudor and KH domain containing protein
chr3	94331897	94332905	+	94331897	94332870	A3SS	0.5	50	50	ENSMUST00000196386.5	ENSMUSG00000041912.13	Tdrkh	chr3	protein_coding	tudor and KH domain containing protein
chr3	94330258	94331808	+	94330258	94331002	A3SS&ES	0.5	50	50	ENSMUST00000196606.5	ENSMUSG00000041912.13	Tdrkh	chr3	protein_coding	tudor and KH domain containing protein
chr3	94340947	94342278	-	94340947;94341856	94341771;94342278	ES	0.5	50	50	ENSMUST00000191506.8	ENSMUSG00000028141.13	Oaz3	chr3	protein_coding	ornithine decarboxylase antizyme 3
chr3	94341856	94343263	-	94341856;94342453	94342278;94343263	ES	0.5	50	50	ENSMUST00000191506.8	ENSMUSG00000028141.13	Oaz3	chr3	protein_coding	ornithine decarboxylase antizyme 3
chr3	94343432	94350945	-	94343432	94343695	5pMXE	0.5	50	50	ENSMUST00000191506.8	ENSMUSG00000028141.13	Oaz3	chr3	protein_coding	ornithine decarboxylase antizyme 3
chr3	94343340	94343342	-	94343340	94343345	A5SS	0.5	50	50	ENSMUST00000191506.8	ENSMUSG00000028141.13	Oaz3	chr3	protein_coding	ornithine decarboxylase antizyme 3
chr3	94340947;94342453	94342278;94343263	-	94340947;94341856	94341771;94343263	MXE	0.5	100	100	ENSMUST00000204913.3	ENSMUSG00000028141.13	Oaz3	chr3	protein_coding	ornithine decarboxylase antizyme 3
chr3	94354650	94357458	+	94354650	94355093	3pMXE	0.5	50	50	ENSMUST00000029786.14	ENSMUSG00000028140.14	Mrpl9	chr3	protein_coding	mitochondrial ribosomal protein L9
chr3	94375139	94379470	-	94374238	94379470	A3SS	0.5	50	50	ENSMUST00000029785.4	ENSMUSG00000028139.6	Riiad1	chr3	protein_coding	regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1
chr3	94374238	94379470	-	94374238	94387545	A5SS	0.5	50	50	ENSMUST00000183915.2	ENSMUSG00000028139.6	Riiad1	chr3	protein_coding	regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1
chr3	94392172	94392583	+	94392172	94392580	A3SS	0.5	50	50	ENSMUST00000199884.5	ENSMUSG00000028137.10	Celf3	chr3	protein_coding	CUGBP, Elav-like family member 3
chr3	94389909	94392124	+	94387657	94392124	A5SS	0.2	50	50	ENSMUST00000199884.5	ENSMUSG00000028137.10	Celf3	chr3	protein_coding	CUGBP, Elav-like family member 3
chr3	94390125	94392124	+	94387657	94392124	A5SS	0.2	50	50	ENSMUST00000199884.5	ENSMUSG00000028137.10	Celf3	chr3	protein_coding	CUGBP, Elav-like family member 3
chr3	94391709	94392124	+	94387657	94392124	A5SS	0.2	50	50	ENSMUST00000199884.5	ENSMUSG00000028137.10	Celf3	chr3	protein_coding	CUGBP, Elav-like family member 3
chr3	94391990	94392124	+	94387657	94392124	A5SS	0.2	50	50	ENSMUST00000199884.5	ENSMUSG00000028137.10	Celf3	chr3	protein_coding	CUGBP, Elav-like family member 3
chr3	94394242	94395094	+	94394242;94394591	94394442;94395094	ES	0.33	50	50	ENSMUST00000198316.5	ENSMUSG00000028137.10	Celf3	chr3	protein_coding	CUGBP, Elav-like family member 3
chr3	94395159	94395834	+	94395159;94395586	94395446;94395834	ES	0.5	50	50	ENSMUST00000198316.5	ENSMUSG00000028137.10	Celf3	chr3	protein_coding	CUGBP, Elav-like family member 3
chr3	94394591	94395010	+	94394591	94395094	A3SS	0.5	50	50	ENSMUST00000198316.5	ENSMUSG00000028137.10	Celf3	chr3	protein_coding	CUGBP, Elav-like family member 3
chr3	94395159	94395493	+	94395159	94395446	A3SS	0.33	50	50	ENSMUST00000198316.5	ENSMUSG00000028137.10	Celf3	chr3	protein_coding	CUGBP, Elav-like family member 3
chr3	94394695	94395094	+	94394591	94395094	A5SS	0.33	50	50	ENSMUST00000198316.5	ENSMUSG00000028137.10	Celf3	chr3	protein_coding	CUGBP, Elav-like family member 3
chr3	94397767	94398440	+	94396914	94398440	A5SS	0.5	50	50	ENSMUST00000198316.5	ENSMUSG00000028137.10	Celf3	chr3	protein_coding	CUGBP, Elav-like family member 3
chr3	94395159;94395586	94395493;94395834	+	94395159	94395834	cassetteExon	0.5	100	100	ENSMUST00000197558.5	ENSMUSG00000028137.10	Celf3	chr3	protein_coding	CUGBP, Elav-like family member 3
chr3	94394242	94395094	+	94394242	94394442	A3SS&ES	0.5	50	50	ENSMUST00000197558.5	ENSMUSG00000028137.10	Celf3	chr3	protein_coding	CUGBP, Elav-like family member 3
chr3	94394242;94394695	94394442;94395094	+	94394242	94395094	cassetteExon	0.5	100	100	ENSMUST00000199775.5	ENSMUSG00000028137.10	Celf3	chr3	protein_coding	CUGBP, Elav-like family member 3
chr3	94390125	94392124	+	94389909	94392124	A5SS	0.2	50	50	ENSMUST00000198067.5	ENSMUSG00000028137.10	Celf3	chr3	protein_coding	CUGBP, Elav-like family member 3
chr3	94391709	94392124	+	94389909	94392124	A5SS	0.2	50	50	ENSMUST00000198067.5	ENSMUSG00000028137.10	Celf3	chr3	protein_coding	CUGBP, Elav-like family member 3
chr3	94391990	94392124	+	94389909	94392124	A5SS	0.2	50	50	ENSMUST00000198067.5	ENSMUSG00000028137.10	Celf3	chr3	protein_coding	CUGBP, Elav-like family member 3
chr3	94391709	94392124	+	94390125	94392124	A5SS	0.2	50	50	ENSMUST00000197699.5	ENSMUSG00000028137.10	Celf3	chr3	protein_coding	CUGBP, Elav-like family member 3
chr3	94391990	94392124	+	94390125	94392124	A5SS	0.2	50	50	ENSMUST00000197699.5	ENSMUSG00000028137.10	Celf3	chr3	protein_coding	CUGBP, Elav-like family member 3
chr3	94394242	94395094	+	94394591	94395094	A5SS	0.33	50	50	ENSMUST00000199148.5	ENSMUSG00000028137.10	Celf3	chr3	protein_coding	CUGBP, Elav-like family member 3
chr3	94391709	94392124	+	94391709;94391990	94391799;94392124	ES	0.5	50	50	ENSMUST00000197677.5	ENSMUSG00000028137.10	Celf3	chr3	protein_coding	CUGBP, Elav-like family member 3
chr3	94395159	94395834	+	94395159	94395446	A3SS	0.33	50	50	ENSMUST00000198796.5	ENSMUSG00000028137.10	Celf3	chr3	protein_coding	CUGBP, Elav-like family member 3
chr3	94395159	94395834	+	94395159	94395493	A3SS	0.33	50	50	ENSMUST00000197033.2	ENSMUSG00000028137.10	Celf3	chr3	protein_coding	CUGBP, Elav-like family member 3
chr3	94431597;94433774	94433747;94436219	-	94431597	94436219	cassetteExon	0.5	100	100	ENSMUST00000029783.16	ENSMUSG00000028136.16	Snx27	chr3	protein_coding	sorting nexin family member 27
chr3	94408578	94409477	-	94409372	94409477	A3SS	0.5	50	50	ENSMUST00000029783.16	ENSMUSG00000028136.16	Snx27	chr3	protein_coding	sorting nexin family member 27
chr3	94410915	94411763	-	94410915	94418349	A5SS	0.5	50	50	ENSMUST00000029783.16	ENSMUSG00000028136.16	Snx27	chr3	protein_coding	sorting nexin family member 27
chr3	94469307	94489683	-	94469307	94489552	A5SS	0.5	50	50	ENSMUST00000029783.16	ENSMUSG00000028136.16	Snx27	chr3	protein_coding	sorting nexin family member 27
chr3	94539969	94542716	-	94539969;94541854	94541765;94542716	ES	0.5	50	50	ENSMUST00000006123.11	ENSMUSG00000005968.15	Tuft1	chr3	protein_coding	tuftelin 1
chr3	94546333	94566032	-	94546333;94546776	94546702;94566032	ES	0.33	50	50	ENSMUST00000006123.11	ENSMUSG00000005968.15	Tuft1	chr3	protein_coding	tuftelin 1
chr3	94546333	94546694	-	94546333	94546702	A5SS	0.33	50	50	ENSMUST00000006123.11	ENSMUSG00000005968.15	Tuft1	chr3	protein_coding	tuftelin 1
chr3	94542802	94566032	-	94542802;94546333	94546232;94566032	ES	0.33	50	50	ENSMUST00000196733.5	ENSMUSG00000005968.15	Tuft1	chr3	protein_coding	tuftelin 1
chr3	94546333;94546776	94546694;94566032	-	94546333	94566032	cassetteExon	0.5	100	100	ENSMUST00000196733.5	ENSMUSG00000005968.15	Tuft1	chr3	protein_coding	tuftelin 1
chr3	94546776	94566032	-	94542802	94566032	A3SS	0.33	50	50	ENSMUST00000200407.2	ENSMUSG00000005968.15	Tuft1	chr3	protein_coding	tuftelin 1
chr3	94600969	94604299	+	94600969;94604157	94604101;94604299	ES	0.5	50	50	ENSMUST00000090848.10	ENSMUSG00000068877.13	Selenbp2	chr3	protein_coding	selenium binding protein 2
chr3	94604157	94604612	+	94604157;94604411	94604299;94604612	ES	0.5	50	50	ENSMUST00000090848.10	ENSMUSG00000068877.13	Selenbp2	chr3	protein_coding	selenium binding protein 2
chr3	94604411	94605350	+	94604411;94604797	94604612;94605350	ES	0.33	50	50	ENSMUST00000090848.10	ENSMUSG00000068877.13	Selenbp2	chr3	protein_coding	selenium binding protein 2
chr3	94607019	94609627	+	94607019;94607423	94607245;94609627	ES	0.5	50	50	ENSMUST00000090848.10	ENSMUSG00000068877.13	Selenbp2	chr3	protein_coding	selenium binding protein 2
chr3	94604157	94604347	+	94604157	94604299	A3SS	0.25	50	50	ENSMUST00000090848.10	ENSMUSG00000068877.13	Selenbp2	chr3	protein_coding	selenium binding protein 2
chr3	94604157	94605350	+	94604157	94604299	A3SS&ES	0.25	50	50	ENSMUST00000132162.9	ENSMUSG00000068877.13	Selenbp2	chr3	protein_coding	selenium binding protein 2
chr3	94604411	94605350	+	94604411	94604612	A3SS	0.5	50	50	ENSMUST00000132162.9	ENSMUSG00000068877.13	Selenbp2	chr3	protein_coding	selenium binding protein 2
chr3	94600969;94604157	94604101;94604612	+	94600969;94604411	94604299;94604612	MXE	0.5	100	100	ENSMUST00000173981.8	ENSMUSG00000068877.13	Selenbp2	chr3	protein_coding	selenium binding protein 2
chr3	94600969;94604157	94604101;94605350	+	94600969;94604797	94604299;94605350	MXE	0.5	100	100	ENSMUST00000173981.8	ENSMUSG00000068877.13	Selenbp2	chr3	protein_coding	selenium binding protein 2
chr3	94604157	94605350	+	94604157;94604411	94604299;94605350	ES	0.33	50	50	ENSMUST00000173849.8	ENSMUSG00000068877.13	Selenbp2	chr3	protein_coding	selenium binding protein 2
chr3	94604157;94604797	94604612;94605350	+	94604157;94604411	94604299;94605350	MXE	0.5	100	100	ENSMUST00000173849.8	ENSMUSG00000068877.13	Selenbp2	chr3	protein_coding	selenium binding protein 2
chr3	94604157	94605350	+	94604157;94604797	94604612;94605350	ES	0.33	50	50	ENSMUST00000131650.9	ENSMUSG00000068877.13	Selenbp2	chr3	protein_coding	selenium binding protein 2
chr3	94607019	94609627	+	94607019	94607245	3pMXE	0.5	50	50	ENSMUST00000131650.9	ENSMUSG00000068877.13	Selenbp2	chr3	protein_coding	selenium binding protein 2
chr3	94600969;94604411	94604299;94605350	+	94600969;94604797	94604101;94605350	MXE	0.5	100	100	ENSMUST00000131650.9	ENSMUSG00000068877.13	Selenbp2	chr3	protein_coding	selenium binding protein 2
chr3	94604157;94604411	94604347;94604612	+	94604157	94604612	cassetteExon	0.5	100	100	ENSMUST00000131650.9	ENSMUSG00000068877.13	Selenbp2	chr3	protein_coding	selenium binding protein 2
chr3	94604157;94604411	94604347;94605350	+	94604157;94604797	94604612;94605350	MXE	0.5	100	100	ENSMUST00000131650.9	ENSMUSG00000068877.13	Selenbp2	chr3	protein_coding	selenium binding protein 2
chr3	94600969;94604411	94604299;94605350	+	94600969;94604157	94604101;94605350	MXE	0.5	100	100	ENSMUST00000174377.2	ENSMUSG00000068877.13	Selenbp2	chr3	protein_coding	selenium binding protein 2
chr3	94604157;94604797	94604299;94605350	+	94604157	94605350	cassetteExon	0.5	100	100	ENSMUST00000174377.2	ENSMUSG00000068877.13	Selenbp2	chr3	protein_coding	selenium binding protein 2
chr3	94604157;94604411	94604347;94605350	+	94604157	94605350	cassetteExon	0.5	100	100	ENSMUST00000174377.2	ENSMUSG00000068877.13	Selenbp2	chr3	protein_coding	selenium binding protein 2
chr3	94604157;94604797	94604347;94605350	+	94604157	94605350	cassetteExon	0.5	100	100	ENSMUST00000174377.2	ENSMUSG00000068877.13	Selenbp2	chr3	protein_coding	selenium binding protein 2
chr3	94600969	94604299	+	94600969	94604101	A3SS&ES	0.5	50	50	ENSMUST00000174223.2	ENSMUSG00000068877.13	Selenbp2	chr3	protein_coding	selenium binding protein 2
chr3	94685399	94685511	-	94685375	94685511	A3SS	0.5	50	50	ENSMUST00000107272.7	ENSMUSG00000068876.17	Cgn	chr3	protein_coding	cingulin
chr3	94761385	94768107	+	94761385;94763512	94763354;94768107	ES	0.5	50	50	ENSMUST00000107270.9	ENSMUSG00000038902.15	Pogz	chr3	protein_coding	pogo transposable element with ZNF domain
chr3	94771978	94778299	+	94771978;94777497	94777391;94778299	ES	0.5	50	50	ENSMUST00000107270.9	ENSMUSG00000038902.15	Pogz	chr3	protein_coding	pogo transposable element with ZNF domain
chr3	94768282	94768667	+	94768282	94769733	A3SS	0.5	50	50	ENSMUST00000107270.9	ENSMUSG00000038902.15	Pogz	chr3	protein_coding	pogo transposable element with ZNF domain
chr3	94771689	94771796	+	94771689	94771769	A3SS	0.5	50	50	ENSMUST00000107270.9	ENSMUSG00000038902.15	Pogz	chr3	protein_coding	pogo transposable element with ZNF domain
chr3	94779738	94780953	+	94779738	94781905	A3SS	0.5	50	50	ENSMUST00000107270.9	ENSMUSG00000038902.15	Pogz	chr3	protein_coding	pogo transposable element with ZNF domain
chr3	94761385;94763512	94763354;94771399	+	94761385;94769841	94768107;94771399	MXE	0.5	100	100	ENSMUST00000107266.8	ENSMUSG00000038902.15	Pogz	chr3	protein_coding	pogo transposable element with ZNF domain
chr3	94761385	94768107	+	94761385	94763354	A3SS&ES	0.5	50	50	ENSMUST00000107269.2	ENSMUSG00000038902.15	Pogz	chr3	protein_coding	pogo transposable element with ZNF domain
chr3	94763512	94768107	+	94763512	94771399	A3SS	0.5	50	50	ENSMUST00000107269.2	ENSMUSG00000038902.15	Pogz	chr3	protein_coding	pogo transposable element with ZNF domain
chr3	94769841	94771399	+	94763512	94771399	A5SS	0.5	50	50	ENSMUST00000107269.2	ENSMUSG00000038902.15	Pogz	chr3	protein_coding	pogo transposable element with ZNF domain
chr3	94844064	94844519	+	94844064;94844318	94844206;94844519	ES	0.5	50	50	ENSMUST00000140757.8	ENSMUSG00000068874.14	Selenbp1	chr3	protein_coding	selenium binding protein 1
chr3	94845386	94847359	+	94845386;94847139	94846957;94847359	ES	0.5	50	50	ENSMUST00000140757.8	ENSMUSG00000068874.14	Selenbp1	chr3	protein_coding	selenium binding protein 1
chr3	94844704	94845266	+	94844708	94845266	A5SS	0.5	50	50	ENSMUST00000140757.8	ENSMUSG00000068874.14	Selenbp1	chr3	protein_coding	selenium binding protein 1
chr3	94845386	94847359	+	94845386	94846957	3pMXE	0.5	50	50	ENSMUST00000139949.8	ENSMUSG00000068874.14	Selenbp1	chr3	protein_coding	selenium binding protein 1
chr3	94862696	94862944	+	94862696	94863057	A3SS	0.5	50	50	ENSMUST00000107260.9	ENSMUSG00000005774.13	Rfx5	chr3	protein_coding	regulatory factor X, 5 (influences HLA class II expression)
chr3	94861562	94862074	+	94861503	94862074	A5SS	0.33	50	50	ENSMUST00000107260.9	ENSMUSG00000005774.13	Rfx5	chr3	protein_coding	regulatory factor X, 5 (influences HLA class II expression)
chr3	94861903	94862074	+	94861503	94862074	A5SS	0.33	50	50	ENSMUST00000107260.9	ENSMUSG00000005774.13	Rfx5	chr3	protein_coding	regulatory factor X, 5 (influences HLA class II expression)
chr3	94862188	94862332	+	94862192	94862332	A5SS	0.25	50	50	ENSMUST00000107260.9	ENSMUSG00000005774.13	Rfx5	chr3	protein_coding	regulatory factor X, 5 (influences HLA class II expression)
chr3	94862195	94862332	+	94862192	94862332	A5SS	0.25	50	50	ENSMUST00000107260.9	ENSMUSG00000005774.13	Rfx5	chr3	protein_coding	regulatory factor X, 5 (influences HLA class II expression)
chr3	94862242	94862332	+	94862192	94862332	A5SS	0.25	50	50	ENSMUST00000107260.9	ENSMUSG00000005774.13	Rfx5	chr3	protein_coding	regulatory factor X, 5 (influences HLA class II expression)
chr3	94862447	94862663	+	94862457	94862663	A5SS	0.5	50	50	ENSMUST00000107260.9	ENSMUSG00000005774.13	Rfx5	chr3	protein_coding	regulatory factor X, 5 (influences HLA class II expression)
chr3	94861562	94862326	+	94861492	94862326	A5SS	0.33	50	50	ENSMUST00000142311.8	ENSMUSG00000005774.13	Rfx5	chr3	protein_coding	regulatory factor X, 5 (influences HLA class II expression)
chr3	94862100	94862326	+	94861492	94862326	A5SS	0.33	50	50	ENSMUST00000142311.8	ENSMUSG00000005774.13	Rfx5	chr3	protein_coding	regulatory factor X, 5 (influences HLA class II expression)
chr3	94861562;94862100	94862074;94862326	+	94861562	94862326	cassetteExon	0.5	100	100	ENSMUST00000137088.8	ENSMUSG00000005774.13	Rfx5	chr3	protein_coding	regulatory factor X, 5 (influences HLA class II expression)
chr3	94862188	94862332	+	94862242	94862332	A5SS	0.25	50	50	ENSMUST00000152869.8	ENSMUSG00000005774.13	Rfx5	chr3	protein_coding	regulatory factor X, 5 (influences HLA class II expression)
chr3	94862195	94862332	+	94862242	94862332	A5SS	0.25	50	50	ENSMUST00000152869.8	ENSMUSG00000005774.13	Rfx5	chr3	protein_coding	regulatory factor X, 5 (influences HLA class II expression)
chr3	94861903	94862074	+	94861562	94862074	A5SS	0.33	50	50	ENSMUST00000140294.8	ENSMUSG00000005774.13	Rfx5	chr3	protein_coding	regulatory factor X, 5 (influences HLA class II expression)
chr3	94861562	94862326	+	94861562	94862074	A3SS&ES	0.5	50	50	ENSMUST00000145472.8	ENSMUSG00000005774.13	Rfx5	chr3	protein_coding	regulatory factor X, 5 (influences HLA class II expression)
chr3	94862195	94862332	+	94862188	94862332	A5SS	0.25	50	50	ENSMUST00000145472.8	ENSMUSG00000005774.13	Rfx5	chr3	protein_coding	regulatory factor X, 5 (influences HLA class II expression)
chr3	94882396	94900277	+	94882396;94892230	94891294;94900277	ES	0.25	50	50	ENSMUST00000072287.12	ENSMUSG00000038861.15	Pi4kb	chr3	protein_coding	phosphatidylinositol 4-kinase beta
chr3	94911683	94913070	+	94911683;94912065	94911945;94913070	ES	0.33	50	50	ENSMUST00000072287.12	ENSMUSG00000038861.15	Pi4kb	chr3	protein_coding	phosphatidylinositol 4-kinase beta
chr3	94892230;94896658	94896614;94900277	+	94892230	94900277	cassetteExon	0.5	100	100	ENSMUST00000072287.12	ENSMUSG00000038861.15	Pi4kb	chr3	protein_coding	phosphatidylinositol 4-kinase beta
chr3	94912065;94912683	94912621;94913070	+	94912065	94913070	cassetteExon	0.5	100	100	ENSMUST00000072287.12	ENSMUSG00000038861.15	Pi4kb	chr3	protein_coding	phosphatidylinositol 4-kinase beta
chr3	94883507	94891294	+	94882396	94891294	A5SS	0.5	50	50	ENSMUST00000072287.12	ENSMUSG00000038861.15	Pi4kb	chr3	protein_coding	phosphatidylinositol 4-kinase beta
chr3	94883507	94900277	+	94892230	94900277	A5SS&ES	0.25	50	50	ENSMUST00000072287.12	ENSMUSG00000038861.15	Pi4kb	chr3	protein_coding	phosphatidylinositol 4-kinase beta
chr3	94882396	94891294	+	94882396	94900277	A3SS	0.5	50	50	ENSMUST00000167008.8	ENSMUSG00000038861.15	Pi4kb	chr3	protein_coding	phosphatidylinositol 4-kinase beta
chr3	94883507	94900277	+	94882396	94900277	A5SS	0.25	50	50	ENSMUST00000167008.8	ENSMUSG00000038861.15	Pi4kb	chr3	protein_coding	phosphatidylinositol 4-kinase beta
chr3	94892230	94900277	+	94882396	94900277	A5SS	0.25	50	50	ENSMUST00000167008.8	ENSMUSG00000038861.15	Pi4kb	chr3	protein_coding	phosphatidylinositol 4-kinase beta
chr3	94896658	94900277	+	94882396	94900277	A5SS	0.25	50	50	ENSMUST00000167008.8	ENSMUSG00000038861.15	Pi4kb	chr3	protein_coding	phosphatidylinositol 4-kinase beta
chr3	94883507	94900277	+	94896658	94900277	A5SS&ES	0.25	50	50	ENSMUST00000107251.9	ENSMUSG00000038861.15	Pi4kb	chr3	protein_coding	phosphatidylinositol 4-kinase beta
chr3	94883507	94891294	+	94883507	94900277	A3SS	0.5	50	50	ENSMUST00000138209.4	ENSMUSG00000038861.15	Pi4kb	chr3	protein_coding	phosphatidylinositol 4-kinase beta
chr3	94912683	94913070	+	94911683	94913070	A5SS	0.33	50	50	ENSMUST00000133166.2	ENSMUSG00000038861.15	Pi4kb	chr3	protein_coding	phosphatidylinositol 4-kinase beta
chr3	94903422	94904130	-	94903419	94904130	A3SS	0.5	50	50	ENSMUST00000141787.2	ENSMUSG00000084846.2	A730011C13Rik	chr3	lncRNA	RIKEN cDNA A730011C13 gene
chr3	94906311	94911534	-	94906311;94909575	94909450;94911534	ES	0.5	50	50	ENSMUST00000133494.2	ENSMUSG00000086288.2	Gm15265	chr3	lncRNA	predicted gene 15265
chr3	94919787	94922631	-	94919787	94922422	5pMXE	0.25	50	50	ENSMUST00000019482.8	ENSMUSG00000019338.14	Zfp687	chr3	protein_coding	zinc finger protein 687
chr3	94919787;94921239	94921144;94922422	-	94919787	94922422	cassetteExon	0.5	100	100	ENSMUST00000019482.8	ENSMUSG00000019338.14	Zfp687	chr3	protein_coding	zinc finger protein 687
chr3	94919787	94922463	-	94919787	94922422	A5SS	0.25	50	50	ENSMUST00000019482.8	ENSMUSG00000019338.14	Zfp687	chr3	protein_coding	zinc finger protein 687
chr3	94916228	94917355	-	94916228	94916387	A5SS&ES	0.5	50	50	ENSMUST00000126222.8	ENSMUSG00000019338.14	Zfp687	chr3	protein_coding	zinc finger protein 687
chr3	94919787;94921239	94921144;94922631	-	94919787	94922631	cassetteExon	0.5	100	100	ENSMUST00000147022.8	ENSMUSG00000019338.14	Zfp687	chr3	protein_coding	zinc finger protein 687
chr3	94916228	94917355	-	94916830	94917355	A3SS&ES	0.5	50	50	ENSMUST00000147022.8	ENSMUSG00000019338.14	Zfp687	chr3	protein_coding	zinc finger protein 687
chr3	94919787	94922463	-	94919787	94922631	A5SS	0.25	50	50	ENSMUST00000147022.8	ENSMUSG00000019338.14	Zfp687	chr3	protein_coding	zinc finger protein 687
chr3	94916228;94916830	94916387;94917355	-	94916228	94917355	cassetteExon	0.5	100	100	ENSMUST00000137799.2	ENSMUSG00000019338.14	Zfp687	chr3	protein_coding	zinc finger protein 687
chr3	94919787	94922422	-	94919787	94921144	A5SS&ES	0.25	50	50	ENSMUST00000132195.8	ENSMUSG00000019338.14	Zfp687	chr3	protein_coding	zinc finger protein 687
chr3	94919787	94922463	-	94919787	94921144	A5SS&ES	0.25	50	50	ENSMUST00000132195.8	ENSMUSG00000019338.14	Zfp687	chr3	protein_coding	zinc finger protein 687
chr3	94921239	94922422	-	94921239	94922631	A5SS	0.5	50	50	ENSMUST00000132195.8	ENSMUSG00000019338.14	Zfp687	chr3	protein_coding	zinc finger protein 687
chr3	94923588	94927049	+	94923588	94923952	3pMXE	0.5	50	50	ENSMUST00000128160.2	ENSMUSG00000085956.2	4930481B07Rik	chr3	lncRNA	RIKEN cDNA 4930481B07 gene
chr3	94941337	94942253	-	94941337;94942092	94941877;94942253	ES	0.5	50	50	ENSMUST00000107237.8	ENSMUSG00000005625.16	Psmd4	chr3	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
chr3	94941075	94941220	-	94941075	94941229	A5SS	0.5	50	50	ENSMUST00000107237.8	ENSMUSG00000005625.16	Psmd4	chr3	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
chr3	94943235	94943888	-	94943235	94943916	A5SS	0.5	50	50	ENSMUST00000107237.8	ENSMUSG00000005625.16	Psmd4	chr3	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
chr3	94971095	94972732	-	94971095;94971785	94971642;94972732	ES	0.5	50	50	ENSMUST00000107236.9	ENSMUSG00000028126.17	Pip5k1a	chr3	protein_coding	phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha
chr3	94978258	94979201	-	94978322	94979201	A3SS	0.5	50	50	ENSMUST00000107236.9	ENSMUSG00000028126.17	Pip5k1a	chr3	protein_coding	phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha
chr3	94990133	95013687	-	94990136	95013687	A3SS	0.25	50	50	ENSMUST00000107236.9	ENSMUSG00000028126.17	Pip5k1a	chr3	protein_coding	phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha
chr3	94990139	95013687	-	94990136	95013687	A3SS	0.25	50	50	ENSMUST00000107236.9	ENSMUSG00000028126.17	Pip5k1a	chr3	protein_coding	phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha
chr3	95004629	95013687	-	94990136	95013687	A3SS	0.25	50	50	ENSMUST00000107236.9	ENSMUSG00000028126.17	Pip5k1a	chr3	protein_coding	phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha
chr3	94985493	94985801	-	94985493	94990102	A5SS	0.5	50	50	ENSMUST00000107236.9	ENSMUSG00000028126.17	Pip5k1a	chr3	protein_coding	phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha
chr3	94990133	95013687	-	94990139	95013687	A3SS	0.25	50	50	ENSMUST00000107233.9	ENSMUSG00000028126.17	Pip5k1a	chr3	protein_coding	phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha
chr3	95004629	95013687	-	94990139	95013687	A3SS	0.25	50	50	ENSMUST00000107233.9	ENSMUSG00000028126.17	Pip5k1a	chr3	protein_coding	phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha
chr3	95004629	95013687	-	94990133	95013687	A3SS	0.25	50	50	ENSMUST00000107232.9	ENSMUSG00000028126.17	Pip5k1a	chr3	protein_coding	phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha
chr3	95018406	95025536	+	95018525	95025536	A5SS	0.25	50	50	ENSMUST00000009102.9	ENSMUSG00000008958.15	Vps72	chr3	protein_coding	vacuolar protein sorting 72
chr3	95018560	95025536	+	95018525	95025536	A5SS	0.25	50	50	ENSMUST00000009102.9	ENSMUSG00000008958.15	Vps72	chr3	protein_coding	vacuolar protein sorting 72
chr3	95022421	95025536	+	95018525	95025536	A5SS	0.25	50	50	ENSMUST00000009102.9	ENSMUSG00000008958.15	Vps72	chr3	protein_coding	vacuolar protein sorting 72
chr3	95018406	95025536	+	95018560	95025536	A5SS	0.25	50	50	ENSMUST00000136076.8	ENSMUSG00000008958.15	Vps72	chr3	protein_coding	vacuolar protein sorting 72
chr3	95022421	95025536	+	95018560	95025536	A5SS	0.25	50	50	ENSMUST00000136076.8	ENSMUSG00000008958.15	Vps72	chr3	protein_coding	vacuolar protein sorting 72
chr3	95022421	95025536	+	95018406	95025536	A5SS	0.25	50	50	ENSMUST00000125548.8	ENSMUSG00000008958.15	Vps72	chr3	protein_coding	vacuolar protein sorting 72
chr3	95031889	95032826	+	95031889;95032577	95032508;95032826	ES	0.33	50	50	ENSMUST00000131597.8	ENSMUSG00000005628.13	Tmod4	chr3	protein_coding	tropomodulin 4
chr3	95031912	95032826	+	95032577	95032826	A5SS&ES	0.33	50	50	ENSMUST00000131597.8	ENSMUSG00000005628.13	Tmod4	chr3	protein_coding	tropomodulin 4
chr3	95034533	95034651	+	95033838	95034651	A5SS	0.5	50	50	ENSMUST00000131597.8	ENSMUSG00000005628.13	Tmod4	chr3	protein_coding	tropomodulin 4
chr3	95031912	95032826	+	95031889	95032826	A5SS	0.33	50	50	ENSMUST00000005769.13	ENSMUSG00000005628.13	Tmod4	chr3	protein_coding	tropomodulin 4
chr3	95037194	95040136	-	95037194;95037669	95037475;95040136	ES	0.5	50	50	ENSMUST00000172572.9	ENSMUSG00000092607.10	Scnm1	chr3	protein_coding	sodium channel modifier 1
chr3	95037273	95037475	-	95037194	95037475	A3SS	0.5	50	50	ENSMUST00000172572.9	ENSMUSG00000092607.10	Scnm1	chr3	protein_coding	sodium channel modifier 1
chr3	95037669	95038487	-	95037669	95040136	A5SS	0.5	50	50	ENSMUST00000172572.9	ENSMUSG00000092607.10	Scnm1	chr3	protein_coding	sodium channel modifier 1
chr3	95037194	95040136	-	95037194	95037475	5pMXE	0.33	50	50	ENSMUST00000174508.2	ENSMUSG00000092607.10	Scnm1	chr3	protein_coding	sodium channel modifier 1
chr3	95037194	95040328	-	95037194	95037475	5pMXE	0.33	50	50	ENSMUST00000174508.2	ENSMUSG00000092607.10	Scnm1	chr3	protein_coding	sodium channel modifier 1
chr3	95037194;95040224	95040136;95040328	-	95037194	95040328	cassetteExon	0.5	100	100	ENSMUST00000174859.8	ENSMUSG00000092607.10	Scnm1	chr3	protein_coding	sodium channel modifier 1
chr3	95037194	95040136	-	95037669	95040136	3pMXE	0.5	50	50	ENSMUST00000173527.2	ENSMUSG00000092607.10	Scnm1	chr3	protein_coding	sodium channel modifier 1
chr3	95068013;95069974	95069926;95071650	+	95068013	95071650	cassetteExon	0.5	100	100	ENSMUST00000142306.2	ENSMUSG00000038777.20	Sema6c	chr3	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
chr3	95068009	95071650	+	95068013	95071650	A5SS	0.16	50	50	ENSMUST00000142306.2	ENSMUSG00000038777.20	Sema6c	chr3	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
chr3	95068023	95071650	+	95068013	95071650	A5SS	0.16	50	50	ENSMUST00000142306.2	ENSMUSG00000038777.20	Sema6c	chr3	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
chr3	95070582	95071650	+	95068013	95071650	A5SS	0.16	50	50	ENSMUST00000142306.2	ENSMUSG00000038777.20	Sema6c	chr3	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
chr3	95070832	95071650	+	95068013	95071650	A5SS	0.16	50	50	ENSMUST00000142306.2	ENSMUSG00000038777.20	Sema6c	chr3	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
chr3	95069974;95070582	95070438;95071650	+	95069974	95071650	cassetteExon	0.5	100	100	ENSMUST00000130814.8	ENSMUSG00000038777.20	Sema6c	chr3	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
chr3	95069974;95070832	95070438;95071650	+	95069974	95071650	cassetteExon	0.5	100	100	ENSMUST00000130814.8	ENSMUSG00000038777.20	Sema6c	chr3	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
chr3	95069974;95070832	95070743;95071650	+	95069974	95071650	cassetteExon	0.5	100	100	ENSMUST00000130814.8	ENSMUSG00000038777.20	Sema6c	chr3	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
chr3	95068009	95071650	+	95069974	95071650	A5SS&ES	0.16	50	50	ENSMUST00000130814.8	ENSMUSG00000038777.20	Sema6c	chr3	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
chr3	95068023	95069926	+	95068013	95069926	A5SS	0.5	50	50	ENSMUST00000130814.8	ENSMUSG00000038777.20	Sema6c	chr3	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
chr3	95068023	95071650	+	95069974	95071650	A5SS&ES	0.16	50	50	ENSMUST00000130814.8	ENSMUSG00000038777.20	Sema6c	chr3	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
chr3	95068023;95069974	95069926;95071650	+	95068023	95071650	cassetteExon	0.5	100	100	ENSMUST00000131620.8	ENSMUSG00000038777.20	Sema6c	chr3	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
chr3	95074431;95074787	95074724;95074935	+	95074431	95074935	cassetteExon	0.5	100	100	ENSMUST00000131620.8	ENSMUSG00000038777.20	Sema6c	chr3	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
chr3	95068009	95071650	+	95068023	95071650	A5SS	0.16	50	50	ENSMUST00000131620.8	ENSMUSG00000038777.20	Sema6c	chr3	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
chr3	95070582	95071650	+	95068023	95071650	A5SS	0.16	50	50	ENSMUST00000131620.8	ENSMUSG00000038777.20	Sema6c	chr3	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
chr3	95070832	95071650	+	95068023	95071650	A5SS	0.16	50	50	ENSMUST00000131620.8	ENSMUSG00000038777.20	Sema6c	chr3	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
chr3	95075037	95075310	+	95074991	95075310	A5SS	0.5	50	50	ENSMUST00000131620.8	ENSMUSG00000038777.20	Sema6c	chr3	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
chr3	95075700	95076120	+	95075700;95076017	95075898;95076120	ES	0.5	50	50	ENSMUST00000204709.3	ENSMUSG00000038777.20	Sema6c	chr3	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
chr3	95078913	95079566	+	95078913;95079197	95079102;95079566	ES	0.5	50	50	ENSMUST00000204709.3	ENSMUSG00000038777.20	Sema6c	chr3	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
chr3	95076692	95076840	+	95076692	95076893	A3SS	0.5	50	50	ENSMUST00000204709.3	ENSMUSG00000038777.20	Sema6c	chr3	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
chr3	95070582	95071650	+	95068009	95071650	A5SS	0.16	50	50	ENSMUST00000204709.3	ENSMUSG00000038777.20	Sema6c	chr3	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
chr3	95070832	95071650	+	95068009	95071650	A5SS	0.16	50	50	ENSMUST00000204709.3	ENSMUSG00000038777.20	Sema6c	chr3	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
chr3	95069974;95070832	95070743;95071650	+	95069974;95070582	95070438;95071650	MXE	0.5	100	100	ENSMUST00000131742.8	ENSMUSG00000038777.20	Sema6c	chr3	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
chr3	95075700	95076120	+	95076017	95076120	A5SS	0.5	50	50	ENSMUST00000134125.8	ENSMUSG00000038777.20	Sema6c	chr3	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
chr3	95113913;95116247	95116151;95123525	-	95113913	95123525	cassetteExon	0.5	100	100	ENSMUST00000107209.8	ENSMUSG00000038766.17	Gabpb2	chr3	protein_coding	GA repeat binding protein, beta 2
chr3	95122785	95123525	-	95113913	95123525	A3SS	0.33	50	50	ENSMUST00000107209.8	ENSMUSG00000038766.17	Gabpb2	chr3	protein_coding	GA repeat binding protein, beta 2
chr3	95122785	95123525	-	95116247	95123525	A3SS	0.33	50	50	ENSMUST00000136139.8	ENSMUSG00000038766.17	Gabpb2	chr3	protein_coding	GA repeat binding protein, beta 2
chr3	95113913	95123525	-	95113913	95116151	5pMXE	0.5	50	50	ENSMUST00000098873.11	ENSMUSG00000038766.17	Gabpb2	chr3	protein_coding	GA repeat binding protein, beta 2
chr3	95127774	95136363	-	95127774	95135395	5pMXE	0.5	50	50	ENSMUST00000065482.6	ENSMUSG00000053192.10	Mllt11	chr3	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 11
chr3	95127774;95135570	95135395;95136363	-	95127774	95136363	cassetteExon	0.5	100	100	ENSMUST00000196025.5	ENSMUSG00000053192.10	Mllt11	chr3	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 11
chr3	95136516	95137297	-	95136516	95139445	A5SS	0.33	50	50	ENSMUST00000196025.5	ENSMUSG00000053192.10	Mllt11	chr3	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 11
chr3	95136516	95137682	-	95136516	95139445	A5SS	0.33	50	50	ENSMUST00000196025.5	ENSMUSG00000053192.10	Mllt11	chr3	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 11
chr3	95127774	95136363	-	95135570	95136363	3pMXE	0.5	50	50	ENSMUST00000198087.2	ENSMUSG00000053192.10	Mllt11	chr3	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 11
chr3	95136516;95137458	95137297;95137682	-	95136516	95137682	cassetteExon	0.5	100	100	ENSMUST00000198087.2	ENSMUSG00000053192.10	Mllt11	chr3	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 11
chr3	95136325	95139096	+	95136176	95139096	A5SS	0.5	50	50	ENSMUST00000053872.12	ENSMUSG00000046722.15	Cdc42se1	chr3	protein_coding	CDC42 small effector 1
chr3	95139639	95139860	+	95139403	95139860	A5SS	0.5	50	50	ENSMUST00000053872.12	ENSMUSG00000046722.15	Cdc42se1	chr3	protein_coding	CDC42 small effector 1
chr3	95139639	95139860	+	95139639	95139759	A3SS	0.5	50	50	ENSMUST00000107200.8	ENSMUSG00000046722.15	Cdc42se1	chr3	protein_coding	CDC42 small effector 1
chr3	95150395	95152296	-	95150395;95151584	95151453;95152296	ES	0.5	50	50	ENSMUST00000107195.9	ENSMUSG00000028115.17	Bnipl	chr3	protein_coding	BCL2/adenovirus E1B 19kD interacting protein like
chr3	95157181	95158276	-	95157181;95157573	95157478;95158276	ES	0.33	50	50	ENSMUST00000107195.9	ENSMUSG00000028115.17	Bnipl	chr3	protein_coding	BCL2/adenovirus E1B 19kD interacting protein like
chr3	95157573;95158029	95157978;95158276	-	95157573	95158276	cassetteExon	0.5	100	100	ENSMUST00000107195.9	ENSMUSG00000028115.17	Bnipl	chr3	protein_coding	BCL2/adenovirus E1B 19kD interacting protein like
chr3	95158029	95158276	-	95157181	95158276	A3SS	0.33	50	50	ENSMUST00000098871.11	ENSMUSG00000028115.17	Bnipl	chr3	protein_coding	BCL2/adenovirus E1B 19kD interacting protein like
chr3	95175634	95176038	-	95175634	95188896	A5SS	0.5	50	50	ENSMUST00000015855.8	ENSMUSG00000015711.9	Prune1	chr3	protein_coding	prune exopolyphosphatase
chr3	95188935	95189994	+	95188922	95189994	A5SS	0.33	50	50	ENSMUST00000152640.2	ENSMUSG00000038712.17	Mindy1	chr3	protein_coding	MINDY lysine 48 deubiquitinase 1
chr3	95189242	95189994	+	95188922	95189994	A5SS	0.33	50	50	ENSMUST00000152640.2	ENSMUSG00000038712.17	Mindy1	chr3	protein_coding	MINDY lysine 48 deubiquitinase 1
chr3	95190936;95194183	95194007;95194956	+	95190936	95194956	cassetteExon	0.5	100	100	ENSMUST00000135249.8	ENSMUSG00000038712.17	Mindy1	chr3	protein_coding	MINDY lysine 48 deubiquitinase 1
chr3	95190055	95190231	+	95190055	95190542	A3SS	0.5	50	50	ENSMUST00000135249.8	ENSMUSG00000038712.17	Mindy1	chr3	protein_coding	MINDY lysine 48 deubiquitinase 1
chr3	95190936	95191896	+	95190936	95194956	A3SS	0.33	50	50	ENSMUST00000135249.8	ENSMUSG00000038712.17	Mindy1	chr3	protein_coding	MINDY lysine 48 deubiquitinase 1
chr3	95193595	95194956	+	95190936	95194956	A5SS	0.33	50	50	ENSMUST00000135249.8	ENSMUSG00000038712.17	Mindy1	chr3	protein_coding	MINDY lysine 48 deubiquitinase 1
chr3	95189242	95189994	+	95188935	95189994	A5SS	0.33	50	50	ENSMUST00000147963.8	ENSMUSG00000038712.17	Mindy1	chr3	protein_coding	MINDY lysine 48 deubiquitinase 1
chr3	95190936	95194007	+	95190936	95191896	3pMXE	0.33	50	50	ENSMUST00000149568.2	ENSMUSG00000038712.17	Mindy1	chr3	protein_coding	MINDY lysine 48 deubiquitinase 1
chr3	95202297	95202584	+	95202297	95202611	A3SS	0.5	50	50	ENSMUST00000039537.14	ENSMUSG00000038712.17	Mindy1	chr3	protein_coding	MINDY lysine 48 deubiquitinase 1
chr3	95193243	95194007	+	95190936	95194007	A5SS	0.5	50	50	ENSMUST00000137743.8	ENSMUSG00000038712.17	Mindy1	chr3	protein_coding	MINDY lysine 48 deubiquitinase 1
chr3	95193595	95194956	+	95194183	95194956	A5SS&ES	0.33	50	50	ENSMUST00000137743.8	ENSMUSG00000038712.17	Mindy1	chr3	protein_coding	MINDY lysine 48 deubiquitinase 1
chr3	95213733	95214385	-	95213733	95213992	5pMXE	0.5	50	50	ENSMUST00000107183.8	ENSMUSG00000015702.14	Anxa9	chr3	protein_coding	annexin A9
chr3	95213831	95213992	-	95213733	95213992	A3SS	0.5	50	50	ENSMUST00000107183.8	ENSMUSG00000015702.14	Anxa9	chr3	protein_coding	annexin A9
chr3	95215451	95222114	-	95214480	95222114	A3SS	0.33	50	50	ENSMUST00000198947.2	ENSMUSG00000093424.4	6330562C20Rik	chr3	lncRNA	RIKEN cDNA 6330562C20 gene
chr3	95218918	95222114	-	95214480	95222114	A3SS	0.33	50	50	ENSMUST00000198947.2	ENSMUSG00000093424.4	6330562C20Rik	chr3	lncRNA	RIKEN cDNA 6330562C20 gene
chr3	95218918	95222114	-	95215451	95222114	A3SS	0.33	50	50	ENSMUST00000098867.4	ENSMUSG00000093424.4	6330562C20Rik	chr3	lncRNA	RIKEN cDNA 6330562C20 gene
chr3	95222656	95227373	+	95222213	95227373	A5SS	0.2	50	50	ENSMUST00000129267.8	ENSMUSG00000015714.12	Cers2	chr3	protein_coding	ceramide synthase 2
chr3	95224754	95227373	+	95222213	95227373	A5SS	0.2	50	50	ENSMUST00000129267.8	ENSMUSG00000015714.12	Cers2	chr3	protein_coding	ceramide synthase 2
chr3	95225433	95227373	+	95222213	95227373	A5SS	0.2	50	50	ENSMUST00000129267.8	ENSMUSG00000015714.12	Cers2	chr3	protein_coding	ceramide synthase 2
chr3	95226264	95227373	+	95222213	95227373	A5SS	0.2	50	50	ENSMUST00000129267.8	ENSMUSG00000015714.12	Cers2	chr3	protein_coding	ceramide synthase 2
chr3	95224754	95227373	+	95222656	95227373	A5SS	0.2	50	50	ENSMUST00000015858.12	ENSMUSG00000015714.12	Cers2	chr3	protein_coding	ceramide synthase 2
chr3	95225433	95227373	+	95222656	95227373	A5SS	0.2	50	50	ENSMUST00000015858.12	ENSMUSG00000015714.12	Cers2	chr3	protein_coding	ceramide synthase 2
chr3	95226264	95227373	+	95222656	95227373	A5SS	0.2	50	50	ENSMUST00000015858.12	ENSMUSG00000015714.12	Cers2	chr3	protein_coding	ceramide synthase 2
chr3	95225433	95227373	+	95224754	95227373	A5SS	0.2	50	50	ENSMUST00000156850.3	ENSMUSG00000015714.12	Cers2	chr3	protein_coding	ceramide synthase 2
chr3	95226264	95227373	+	95224754	95227373	A5SS	0.2	50	50	ENSMUST00000156850.3	ENSMUSG00000015714.12	Cers2	chr3	protein_coding	ceramide synthase 2
chr3	95226264	95227373	+	95225433	95227373	A5SS	0.2	50	50	ENSMUST00000139498.8	ENSMUSG00000015714.12	Cers2	chr3	protein_coding	ceramide synthase 2
chr3	95247376	95247473	-	95247373	95247473	A3SS	0.5	50	50	ENSMUST00000124638.8	ENSMUSG00000015697.15	Setdb1	chr3	protein_coding	SET domain, bifurcated 1
chr3	95263513	95264338	-	95263513	95264376	A5SS	0.5	50	50	ENSMUST00000124638.8	ENSMUSG00000015697.15	Setdb1	chr3	protein_coding	SET domain, bifurcated 1
chr3	95367732	95377488	+	95367732;95374148	95374104;95377488	ES	0.5	50	50	ENSMUST00000147765.8	ENSMUSG00000015522.19	Arnt	chr3	protein_coding	aryl hydrocarbon receptor nuclear translocator
chr3	95391159	95394560	+	95391159;95392304	95392170;95394560	ES	0.5	50	50	ENSMUST00000147765.8	ENSMUSG00000015522.19	Arnt	chr3	protein_coding	aryl hydrocarbon receptor nuclear translocator
chr3	95367732	95372937	+	95367732	95374104	A3SS	0.33	50	50	ENSMUST00000147765.8	ENSMUSG00000015522.19	Arnt	chr3	protein_coding	aryl hydrocarbon receptor nuclear translocator
chr3	95398481	95401012	+	95398481	95401009	A3SS	0.5	50	50	ENSMUST00000102749.11	ENSMUSG00000015522.19	Arnt	chr3	protein_coding	aryl hydrocarbon receptor nuclear translocator
chr3	95401126	95401758	+	95401171	95401758	A5SS	0.5	50	50	ENSMUST00000102749.11	ENSMUSG00000015522.19	Arnt	chr3	protein_coding	aryl hydrocarbon receptor nuclear translocator
chr3	95367732	95372937	+	95367732	95377488	A3SS	0.33	50	50	ENSMUST00000090804.12	ENSMUSG00000015522.19	Arnt	chr3	protein_coding	aryl hydrocarbon receptor nuclear translocator
chr3	95367732	95377488	+	95374148	95377488	5pMXE	0.5	50	50	ENSMUST00000156653.8	ENSMUSG00000015522.19	Arnt	chr3	protein_coding	aryl hydrocarbon receptor nuclear translocator
chr3	95434236	95436748	+	95434236	95436745	A3SS	0.5	50	50	ENSMUST00000015667.9	ENSMUSG00000038642.11	Ctss	chr3	protein_coding	cathepsin S
chr3	95492525	95494692	+	95492525;95492900	95492846;95494692	ES	0.5	50	50	ENSMUST00000090797.11	ENSMUSG00000028109.15	Hormad1	chr3	protein_coding	HORMA domain containing 1
chr3	95467043	95468539	+	95467034	95468539	A5SS	0.5	50	50	ENSMUST00000090797.11	ENSMUSG00000028109.15	Hormad1	chr3	protein_coding	HORMA domain containing 1
chr3	95492525	95494692	+	95492525	95492846	3pMXE	0.5	50	50	ENSMUST00000171191.6	ENSMUSG00000028109.15	Hormad1	chr3	protein_coding	HORMA domain containing 1
chr3	95496445	95515217	+	95496445;95499216	95499028;95515217	ES	0.5	50	50	ENSMUST00000177390.8	ENSMUSG00000046519.16	Golph3l	chr3	protein_coding	golgi phosphoprotein 3-like
chr3	95499216	95516983	+	95499216;95515348	95515217;95516983	ES	0.5	50	50	ENSMUST00000177390.8	ENSMUSG00000046519.16	Golph3l	chr3	protein_coding	golgi phosphoprotein 3-like
chr3	95515348	95524355	+	95515348;95517097	95516983;95524355	ES	0.5	50	50	ENSMUST00000177390.8	ENSMUSG00000046519.16	Golph3l	chr3	protein_coding	golgi phosphoprotein 3-like
chr3	95496445	95524384	+	95496445	95499028	A3SS&ES	0.33	50	50	ENSMUST00000177390.8	ENSMUSG00000046519.16	Golph3l	chr3	protein_coding	golgi phosphoprotein 3-like
chr3	95496445;95499216	95499028;95516983	+	95496445;95515348	95515217;95516983	MXE	0.5	100	100	ENSMUST00000060323.12	ENSMUSG00000046519.16	Golph3l	chr3	protein_coding	golgi phosphoprotein 3-like
chr3	95496445	95524384	+	95496445	95515217	A3SS&ES	0.33	50	50	ENSMUST00000060323.12	ENSMUSG00000046519.16	Golph3l	chr3	protein_coding	golgi phosphoprotein 3-like
chr3	95496445;95515348	95515217;95524355	+	95496445;95517097	95499028;95524355	MXE	0.5	100	100	ENSMUST00000176674.8	ENSMUSG00000046519.16	Golph3l	chr3	protein_coding	golgi phosphoprotein 3-like
chr3	95499216;95515348	95515217;95524355	+	95499216;95517097	95516983;95524355	MXE	0.5	100	100	ENSMUST00000176674.8	ENSMUSG00000046519.16	Golph3l	chr3	protein_coding	golgi phosphoprotein 3-like
chr3	95584306	95584421	-	95584279	95584421	A3SS	0.5	50	50	ENSMUST00000117782.8	ENSMUSG00000015850.12	Adamtsl4	chr3	protein_coding	ADAMTS-like 4
chr3	95586454	95586898	-	95585315	95586898	A3SS	0.5	50	50	ENSMUST00000117782.8	ENSMUSG00000015850.12	Adamtsl4	chr3	protein_coding	ADAMTS-like 4
chr3	95592863	95595132	-	95592981	95595132	A3SS	0.5	50	50	ENSMUST00000117782.8	ENSMUSG00000015850.12	Adamtsl4	chr3	protein_coding	ADAMTS-like 4
chr3	95592008	95592254	-	95592008	95592269	A5SS	0.5	50	50	ENSMUST00000117782.8	ENSMUSG00000015850.12	Adamtsl4	chr3	protein_coding	ADAMTS-like 4
chr3	95644366	95644945	-	95644369	95644945	A3SS	0.5	50	50	ENSMUST00000117507.10	ENSMUSG00000028108.17	Ecm1	chr3	protein_coding	extracellular matrix protein 1
chr3	95645179	95645324	-	95645200	95645324	A3SS	0.33	50	50	ENSMUST00000117507.10	ENSMUSG00000028108.17	Ecm1	chr3	protein_coding	extracellular matrix protein 1
chr3	95645254	95645324	-	95645200	95645324	A3SS	0.33	50	50	ENSMUST00000117507.10	ENSMUSG00000028108.17	Ecm1	chr3	protein_coding	extracellular matrix protein 1
chr3	95645254	95645551	-	95645428	95645551	A3SS&ES	0.33	50	50	ENSMUST00000117507.10	ENSMUSG00000028108.17	Ecm1	chr3	protein_coding	extracellular matrix protein 1
chr3	95645425	95645551	-	95645428	95645551	A3SS	0.33	50	50	ENSMUST00000117507.10	ENSMUSG00000028108.17	Ecm1	chr3	protein_coding	extracellular matrix protein 1
chr3	95645254;95645425	95645324;95645551	-	95645254	95645551	cassetteExon	0.5	100	100	ENSMUST00000123143.8	ENSMUSG00000028108.17	Ecm1	chr3	protein_coding	extracellular matrix protein 1
chr3	95645254;95645428	95645324;95645551	-	95645254	95645551	cassetteExon	0.5	100	100	ENSMUST00000123143.8	ENSMUSG00000028108.17	Ecm1	chr3	protein_coding	extracellular matrix protein 1
chr3	95645179	95645324	-	95645254	95645324	A3SS	0.33	50	50	ENSMUST00000131376.8	ENSMUSG00000028108.17	Ecm1	chr3	protein_coding	extracellular matrix protein 1
chr3	95645254	95645551	-	95645425	95645551	A3SS&ES	0.33	50	50	ENSMUST00000128885.8	ENSMUSG00000028108.17	Ecm1	chr3	protein_coding	extracellular matrix protein 1
chr3	95649990	95653345	-	95649990;95653174	95653097;95653345	ES	0.5	50	50	ENSMUST00000199869.5	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95654009	95655354	-	95654009;95654968	95654751;95655354	ES	0.33	50	50	ENSMUST00000199869.5	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95654968	95655799	-	95654968;95655452	95655354;95655799	ES	0.5	50	50	ENSMUST00000199869.5	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95647631;95648427	95648340;95648634	-	95647631	95648634	cassetteExon	0.5	100	100	ENSMUST00000199869.5	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95649535	95649628	-	95649458	95649628	A3SS	0.5	50	50	ENSMUST00000199869.5	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95655452	95657651	-	95655452	95655799	A5SS	0.5	50	50	ENSMUST00000199869.5	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95655452	95657651	-	95655452;95655866	95655799;95657651	ES	0.33	50	50	ENSMUST00000196077.5	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95658296	95660319	-	95658296;95658942	95658818;95660319	ES	0.33	50	50	ENSMUST00000196077.5	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95660442	95662070	-	95660442;95661827	95661631;95662070	ES	0.5	50	50	ENSMUST00000196077.5	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95653482;95654009	95653847;95655354	-	95653482	95655354	cassetteExon	0.5	100	100	ENSMUST00000196077.5	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95654968	95655354	-	95653482	95655354	A3SS	0.33	50	50	ENSMUST00000196077.5	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95654968	95655799	-	95655452	95655799	A3SS&ES	0.5	50	50	ENSMUST00000196077.5	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95655945	95657651	-	95655866	95657651	A3SS	0.33	50	50	ENSMUST00000196077.5	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95658339	95658818	-	95658296	95658818	A3SS	0.5	50	50	ENSMUST00000196077.5	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95658077	95658150	-	95658077	95658179	A5SS	0.33	50	50	ENSMUST00000196077.5	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95660442	95661684	-	95660442	95661631	A5SS	0.33	50	50	ENSMUST00000196077.5	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95655452	95657651	-	95655452;95655945	95655799;95657651	ES	0.33	50	50	ENSMUST00000199464.5	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95658077	95660319	-	95658077;95658296	95658179;95660319	ES	0.33	50	50	ENSMUST00000199464.5	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95654009;95654968	95654751;95655799	-	95654009;95655452	95655354;95655799	MXE	0.5	100	100	ENSMUST00000199464.5	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95658077;95658296	95658150;95660319	-	95658077	95660319	cassetteExon	0.5	100	100	ENSMUST00000163530.8	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95658942	95660319	-	95658077	95660319	A3SS	0.33	50	50	ENSMUST00000163530.8	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95649990	95653345	-	95653174	95653345	3pMXE	0.5	50	50	ENSMUST00000098857.9	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95653482;95655452	95655354;95655799	-	95653482;95654968	95653847;95655799	MXE	0.5	100	100	ENSMUST00000197389.2	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95654009	95655354	-	95654968	95655354	3pMXE	0.33	50	50	ENSMUST00000195929.5	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95654968;95655866	95655799;95657651	-	95654968;95655452	95655354;95657651	MXE	0.5	100	100	ENSMUST00000195929.5	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95654968;95655945	95655799;95657651	-	95654968;95655452	95655354;95657651	MXE	0.5	100	100	ENSMUST00000195929.5	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95660442;95661827	95661684;95662070	-	95660442	95662070	cassetteExon	0.5	100	100	ENSMUST00000195929.5	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95655452	95657651	-	95655945	95657651	3pMXE	0.33	50	50	ENSMUST00000199570.2	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95660442	95662070	-	95660442	95661631	5pMXE	0.33	50	50	ENSMUST00000198007.5	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95658296	95660319	-	95658942	95660319	A3SS&ES	0.33	50	50	ENSMUST00000196475.5	ENSMUSG00000028107.15	Tars2	chr3	protein_coding	threonyl-tRNA synthetase 2, mitochondrial (putative)
chr3	95692418;95693709	95693632;95694596	-	95692418	95694596	cassetteExon	0.5	100	100	ENSMUST00000200164.5	ENSMUSG00000028106.14	Rprd2	chr3	protein_coding	regulation of nuclear pre-mRNA domain containing 2
chr3	95692418;95693763	95693632;95694596	-	95692418	95694596	cassetteExon	0.5	100	100	ENSMUST00000200164.5	ENSMUSG00000028106.14	Rprd2	chr3	protein_coding	regulation of nuclear pre-mRNA domain containing 2
chr3	95680465	95681424	-	95679508	95681424	A3SS	0.5	50	50	ENSMUST00000200164.5	ENSMUSG00000028106.14	Rprd2	chr3	protein_coding	regulation of nuclear pre-mRNA domain containing 2
chr3	95693709	95694596	-	95693763	95694596	A3SS	0.33	50	50	ENSMUST00000090791.8	ENSMUSG00000028106.14	Rprd2	chr3	protein_coding	regulation of nuclear pre-mRNA domain containing 2
chr3	95756373;95757102	95757007;95758875	-	95756373	95758875	cassetteExon	0.5	100	100	ENSMUST00000015892.14	ENSMUSG00000015748.14	Prpf3	chr3	protein_coding	pre-mRNA processing factor 3
chr3	95742837	95742956	-	95742779	95742956	A3SS	0.5	50	50	ENSMUST00000015892.14	ENSMUSG00000015748.14	Prpf3	chr3	protein_coding	pre-mRNA processing factor 3
chr3	95748056	95751498	-	95748061	95751498	A3SS	0.5	50	50	ENSMUST00000015892.14	ENSMUSG00000015748.14	Prpf3	chr3	protein_coding	pre-mRNA processing factor 3
chr3	95760949	95762632	-	95760949	95763061	A5SS	0.5	50	50	ENSMUST00000015892.14	ENSMUSG00000015748.14	Prpf3	chr3	protein_coding	pre-mRNA processing factor 3
chr3	95739934;95741514	95741065;95742666	-	95739934	95742666	cassetteExon	0.5	100	100	ENSMUST00000159901.8	ENSMUSG00000015748.14	Prpf3	chr3	protein_coding	pre-mRNA processing factor 3
chr3	95756373	95758875	-	95757102	95758875	3pMXE	0.5	50	50	ENSMUST00000161073.2	ENSMUSG00000015748.14	Prpf3	chr3	protein_coding	pre-mRNA processing factor 3
chr3	95770244	95770442	-	95770244	95777806	A5SS	0.5	50	50	ENSMUST00000067298.5	ENSMUSG00000054312.7	Mrps21	chr3	protein_coding	mitochondrial ribosomal protein S21
chr3	95778997	95782005	+	95778997	95794103	A3SS	0.5	50	50	ENSMUST00000142433.2	ENSMUSG00000080727.3	C920021L13Rik	chr3	lncRNA	RIKEN cDNA C920021L13 gene
chr3	95787097	95787721	-	95786461	95787721	A3SS	0.5	50	50	ENSMUST00000159739.8	ENSMUSG00000038550.11	Ciart	chr3	protein_coding	circadian associated repressor of transcription
chr3	95788370	95789467	-	95788370	95788493	A5SS	0.5	50	50	ENSMUST00000159739.8	ENSMUSG00000038550.11	Ciart	chr3	protein_coding	circadian associated repressor of transcription
chr3	95788370	95789467	-	95788370;95788901	95788493;95789467	ES	0.33	50	50	ENSMUST00000036418.10	ENSMUSG00000038550.11	Ciart	chr3	protein_coding	circadian associated repressor of transcription
chr3	95788591	95789467	-	95788901	95789467	A3SS	0.33	50	50	ENSMUST00000036418.10	ENSMUSG00000038550.11	Ciart	chr3	protein_coding	circadian associated repressor of transcription
chr3	95788901	95789267	-	95788901	95789467	A5SS	0.5	50	50	ENSMUST00000036418.10	ENSMUSG00000038550.11	Ciart	chr3	protein_coding	circadian associated repressor of transcription
chr3	95788370;95788591	95788493;95789467	-	95788370	95789467	cassetteExon	0.5	100	100	ENSMUST00000161866.8	ENSMUSG00000038550.11	Ciart	chr3	protein_coding	circadian associated repressor of transcription
chr3	95792380	95795453	-	95792383	95795453	A3SS	0.5	50	50	ENSMUST00000090476.10	ENSMUSG00000038543.14	BC028528	chr3	protein_coding	cDNA sequence BC028528
chr3	95801595	95802269	+	95801595	95802133	A3SS	0.5	50	50	ENSMUST00000015894.12	ENSMUSG00000015750.16	Aph1a	chr3	protein_coding	aph1 homolog A, gamma secretase subunit
chr3	95808584;95808792	95808771;95809423	-	95808584	95809423	cassetteExon	0.5	100	100	ENSMUST00000036181.15	ENSMUSG00000038526.15	Car14	chr3	protein_coding	carbonic anhydrase 14
chr3	95809443	95810847	-	95809443	95811632	A5SS	0.5	50	50	ENSMUST00000036181.15	ENSMUSG00000038526.15	Car14	chr3	protein_coding	carbonic anhydrase 14
chr3	95841370	95844336	+	95841370;95842210	95842088;95844336	ES	0.5	50	50	ENSMUST00000165307.8	ENSMUSG00000015749.13	Anp32e	chr3	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
chr3	95836962	95844432	+	95836962	95841221	A3SS&ES	0.25	50	50	ENSMUST00000165307.8	ENSMUSG00000015749.13	Anp32e	chr3	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
chr3	95836962	95845248	+	95836962	95841221	A3SS&ES	0.25	50	50	ENSMUST00000165307.8	ENSMUSG00000015749.13	Anp32e	chr3	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
chr3	95836962	95845316	+	95836962	95841221	A3SS&ES	0.25	50	50	ENSMUST00000165307.8	ENSMUSG00000015749.13	Anp32e	chr3	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
chr3	95837931	95841221	+	95836962	95841221	A5SS	0.33	50	50	ENSMUST00000165307.8	ENSMUSG00000015749.13	Anp32e	chr3	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
chr3	95840217	95841221	+	95836962	95841221	A5SS	0.33	50	50	ENSMUST00000165307.8	ENSMUSG00000015749.13	Anp32e	chr3	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
chr3	95845315	95851619	+	95845351	95851619	A5SS	0.33	50	50	ENSMUST00000165307.8	ENSMUSG00000015749.13	Anp32e	chr3	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
chr3	95836962;95841370	95841221;95851619	+	95836962;95845351	95845316;95851619	MXE	0.5	100	100	ENSMUST00000169426.8	ENSMUSG00000015749.13	Anp32e	chr3	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
chr3	95836962	95844432	+	95836962	95845316	A3SS	0.25	50	50	ENSMUST00000169426.8	ENSMUSG00000015749.13	Anp32e	chr3	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
chr3	95836962	95845248	+	95836962	95845316	A3SS	0.25	50	50	ENSMUST00000169426.8	ENSMUSG00000015749.13	Anp32e	chr3	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
chr3	95836962;95841370	95841221;95851619	+	95836962;95845351	95844432;95851619	MXE	0.5	100	100	ENSMUST00000171368.8	ENSMUSG00000015749.13	Anp32e	chr3	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
chr3	95836962	95845248	+	95836962	95844432	A3SS&ES	0.25	50	50	ENSMUST00000171368.8	ENSMUSG00000015749.13	Anp32e	chr3	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
chr3	95836962;95841370	95841221;95851619	+	95836962;95845351	95845248;95851619	MXE	0.5	100	100	ENSMUST00000170213.2	ENSMUSG00000015749.13	Anp32e	chr3	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
chr3	95836962;95845315	95845248;95851619	+	95836962;95841370	95841221;95851619	MXE	0.5	100	100	ENSMUST00000170125.2	ENSMUSG00000015749.13	Anp32e	chr3	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
chr3	95841370	95842088	+	95841370	95851619	A3SS	0.33	50	50	ENSMUST00000170125.2	ENSMUSG00000015749.13	Anp32e	chr3	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
chr3	95841370	95844336	+	95841370	95851619	A3SS	0.33	50	50	ENSMUST00000170125.2	ENSMUSG00000015749.13	Anp32e	chr3	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
chr3	95840217	95841221	+	95837931	95841221	A5SS	0.33	50	50	ENSMUST00000171035.8	ENSMUSG00000015749.13	Anp32e	chr3	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
chr3	95896945	95898756	-	95896945;95898214	95898113;95898756	ES	0.5	50	50	ENSMUST00000015889.10	ENSMUSG00000015745.10	Plekho1	chr3	protein_coding	pleckstrin homology domain containing, family O member 1
chr3	95902956	95903083	-	95902980	95903083	A3SS	0.5	50	50	ENSMUST00000015889.10	ENSMUSG00000015745.10	Plekho1	chr3	protein_coding	pleckstrin homology domain containing, family O member 1
chr3	96012131	96043785	+	96012131;96037654	96037542;96043785	ES	0.33	50	50	ENSMUST00000132980.8	ENSMUSG00000038495.15	Otud7b	chr3	protein_coding	OTU domain containing 7B
chr3	96012131;96016080	96016023;96037542	+	96012131	96037542	cassetteExon	0.5	100	100	ENSMUST00000132980.8	ENSMUSG00000038495.15	Otud7b	chr3	protein_coding	OTU domain containing 7B
chr3	96012131;96016080	96016023;96043785	+	96012131;96037654	96037542;96043785	MXE	0.5	100	100	ENSMUST00000132980.8	ENSMUSG00000038495.15	Otud7b	chr3	protein_coding	OTU domain containing 7B
chr3	96011940	96037542	+	96012131	96037542	A5SS	0.33	50	50	ENSMUST00000132980.8	ENSMUSG00000038495.15	Otud7b	chr3	protein_coding	OTU domain containing 7B
chr3	96047741	96048799	+	96047916	96048799	A5SS	0.5	50	50	ENSMUST00000132980.8	ENSMUSG00000038495.15	Otud7b	chr3	protein_coding	OTU domain containing 7B
chr3	96012131;96016080	96016023;96043785	+	96012131	96043785	cassetteExon	0.5	100	100	ENSMUST00000138206.8	ENSMUSG00000038495.15	Otud7b	chr3	protein_coding	OTU domain containing 7B
chr3	96016080;96037654	96037542;96043785	+	96016080	96043785	cassetteExon	0.5	100	100	ENSMUST00000090785.9	ENSMUSG00000038495.15	Otud7b	chr3	protein_coding	OTU domain containing 7B
chr3	96014523	96016023	+	96012131	96016023	A5SS	0.5	50	50	ENSMUST00000090785.9	ENSMUSG00000038495.15	Otud7b	chr3	protein_coding	OTU domain containing 7B
chr3	96016080	96037542	+	96011940	96037542	A5SS	0.33	50	50	ENSMUST00000196172.2	ENSMUSG00000038495.15	Otud7b	chr3	protein_coding	OTU domain containing 7B
chr3	96075459;96076081	96075915;96076352	+	96075459	96076352	cassetteExon	0.5	100	100	ENSMUST00000147245.8	ENSMUSG00000045934.16	Mtmr11	chr3	protein_coding	myotubularin related protein 11
chr3	96070036	96070494	+	96070036	96070409	A3SS	0.5	50	50	ENSMUST00000147245.8	ENSMUSG00000045934.16	Mtmr11	chr3	protein_coding	myotubularin related protein 11
chr3	96072190	96072488	+	96072402	96072488	A5SS	0.5	50	50	ENSMUST00000147245.8	ENSMUSG00000045934.16	Mtmr11	chr3	protein_coding	myotubularin related protein 11
chr3	96072190	96072488	+	96072190;96072402	96072314;96072488	ES	0.5	50	50	ENSMUST00000054356.16	ENSMUSG00000045934.16	Mtmr11	chr3	protein_coding	myotubularin related protein 11
chr3	96077962	96078459	+	96077962	96078402	A3SS	0.5	50	50	ENSMUST00000054356.16	ENSMUSG00000045934.16	Mtmr11	chr3	protein_coding	myotubularin related protein 11
chr3	96100664	96102638	+	96100664	96101049	A3SS	0.5	50	50	ENSMUST00000035371.9	ENSMUSG00000038486.10	Sv2a	chr3	protein_coding	synaptic vesicle glycoprotein 2 a
chr3	96105053	96105481	-	96105053	96126939	A5SS	0.5	50	50	ENSMUST00000177442.2	ENSMUSG00000015943.12	Bola1	chr3	protein_coding	bolA-like 1 (E. coli)
chr3	96194548	96199786	-	96194548	96199569	A5SS	0.5	50	50	ENSMUST00000029748.8	ENSMUSG00000015947.11	Fcgr1	chr3	protein_coding	Fc receptor, IgG, high affinity I
chr3	96257294	96262723	+	96256957	96262723	A5SS	0.5	50	50	ENSMUST00000199348.5	ENSMUSG00000097851.6	Platr30	chr3	lncRNA	pluripotency associated transcript 30
chr3	96341758	96348025	-	96341758;96342146	96342053;96348025	ES	0.5	50	50	ENSMUST00000093126.11	ENSMUSG00000046317.15	BC107364	chr3	protein_coding	cDNA sequence BC107364
chr3	96465801	96466208	+	96465801	96466205	A3SS	0.5	50	50	ENSMUST00000074519.13	ENSMUSG00000038393.15	Txnip	chr3	protein_coding	thioredoxin interacting protein
chr3	96467161	96468699	+	96467161	96467254	A3SS&ES	0.5	50	50	ENSMUST00000074519.13	ENSMUSG00000038393.15	Txnip	chr3	protein_coding	thioredoxin interacting protein
chr3	96489089	96501400	-	96489089;96489571	96489404;96501400	ES	0.5	50	50	ENSMUST00000091924.10	ENSMUSG00000028104.15	Polr3gl	chr3	protein_coding	polymerase (RNA) III (DNA directed) polypeptide G like
chr3	96516443	96536774	-	96531946	96536774	A3SS&ES	0.5	50	50	ENSMUST00000160818.2	ENSMUSG00000045327.8	6330549D23Rik	chr3	transcribed_processed_pseudogene	RIKEN cDNA 6330549D23 gene
chr3	96537677	96537793	+	96537677	96537796	A3SS	0.5	50	50	ENSMUST00000048915.11	ENSMUSG00000038374.11	Rbm8a	chr3	protein_coding	RNA binding motif protein 8a
chr3	96543055	96543990	+	96542816	96543990	A5SS	0.25	50	50	ENSMUST00000144962.8	ENSMUSG00000028102.16	Pex11b	chr3	protein_coding	peroxisomal biogenesis factor 11 beta
chr3	96543059	96543990	+	96542816	96543990	A5SS	0.25	50	50	ENSMUST00000144962.8	ENSMUSG00000028102.16	Pex11b	chr3	protein_coding	peroxisomal biogenesis factor 11 beta
chr3	96543240	96543990	+	96542816	96543990	A5SS	0.25	50	50	ENSMUST00000144962.8	ENSMUSG00000028102.16	Pex11b	chr3	protein_coding	peroxisomal biogenesis factor 11 beta
chr3	96543055	96543990	+	96543059	96543990	A5SS	0.25	50	50	ENSMUST00000118557.8	ENSMUSG00000028102.16	Pex11b	chr3	protein_coding	peroxisomal biogenesis factor 11 beta
chr3	96543240	96543990	+	96543059	96543990	A5SS	0.25	50	50	ENSMUST00000118557.8	ENSMUSG00000028102.16	Pex11b	chr3	protein_coding	peroxisomal biogenesis factor 11 beta
chr3	96543240	96543990	+	96543055	96543990	A5SS	0.25	50	50	ENSMUST00000156015.2	ENSMUSG00000028102.16	Pex11b	chr3	protein_coding	peroxisomal biogenesis factor 11 beta
chr3	96553002	96554396	+	96551123	96554396	A5SS	0.5	50	50	ENSMUST00000137564.5	ENSMUSG00000106447.2	Gm42957	chr3	protein_coding	predicted gene 42957
chr3	96563609	96563757	+	96563609	96563760	A3SS	0.5	50	50	ENSMUST00000119365.8	ENSMUSG00000090210.8	Itga10	chr3	protein_coding	integrin, alpha 10
chr3	96585583	96586496	+	96585579	96586496	A5SS	0.5	50	50	ENSMUST00000048427.9	ENSMUSG00000038354.14	Ankrd35	chr3	protein_coding	ankyrin repeat domain 35
chr3	96587433	96587787	+	96587010	96587787	A5SS	0.5	50	50	ENSMUST00000048427.9	ENSMUSG00000038354.14	Ankrd35	chr3	protein_coding	ankyrin repeat domain 35
chr3	96604511	96606736	+	96603847	96606736	A5SS	0.33	50	50	ENSMUST00000107076.10	ENSMUSG00000028101.19	Pias3	chr3	protein_coding	protein inhibitor of activated STAT 3
chr3	96604599	96606736	+	96603847	96606736	A5SS	0.33	50	50	ENSMUST00000107076.10	ENSMUSG00000028101.19	Pias3	chr3	protein_coding	protein inhibitor of activated STAT 3
chr3	96610944	96611055	+	96610975	96611055	A5SS	0.5	50	50	ENSMUST00000107076.10	ENSMUSG00000028101.19	Pias3	chr3	protein_coding	protein inhibitor of activated STAT 3
chr3	96604511	96606736	+	96604511	96606690	A3SS	0.5	50	50	ENSMUST00000162778.3	ENSMUSG00000028101.19	Pias3	chr3	protein_coding	protein inhibitor of activated STAT 3
chr3	96604599	96606736	+	96604511	96606736	A5SS	0.33	50	50	ENSMUST00000064900.16	ENSMUSG00000028101.19	Pias3	chr3	protein_coding	protein inhibitor of activated STAT 3
chr3	96615202	96615308	-	96615125	96615308	A3SS	0.5	50	50	ENSMUST00000200387.2	ENSMUSG00000028100.12	Nudt17	chr3	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 17
chr3	96615491	96615644	-	96615452	96615644	A3SS	0.5	50	50	ENSMUST00000200387.2	ENSMUSG00000028100.12	Nudt17	chr3	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 17
chr3	96614966	96615100	-	96614966	96615126	A5SS	0.5	50	50	ENSMUST00000029742.9	ENSMUSG00000028100.12	Nudt17	chr3	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 17
chr3	96624121	96626550	-	96624063	96626550	A3SS	0.5	50	50	ENSMUST00000029741.9	ENSMUSG00000028099.9	Polr3c	chr3	protein_coding	polymerase (RNA) III (DNA directed) polypeptide C
chr3	96633315	96634429	-	96633315	96634665	A5SS	0.5	50	50	ENSMUST00000029741.9	ENSMUSG00000028099.9	Polr3c	chr3	protein_coding	polymerase (RNA) III (DNA directed) polypeptide C
chr3	96661709;96662520	96662379;96665293	+	96661709	96665293	cassetteExon	0.5	100	100	ENSMUST00000029740.14	ENSMUSG00000028098.14	Rnf115	chr3	protein_coding	ring finger protein 115
chr3	96665350;96667078	96667024;96682946	+	96665350	96682946	cassetteExon	0.5	100	100	ENSMUST00000029740.14	ENSMUSG00000028098.14	Rnf115	chr3	protein_coding	ring finger protein 115
chr3	96707935	96712854	-	96707935;96709724	96709593;96712854	ES	0.5	50	50	ENSMUST00000107074.8	ENSMUSG00000038304.15	Cd160	chr3	protein_coding	CD160 antigen
chr3	96716251	96721786	-	96716251	96736539	A5SS	0.5	50	50	ENSMUST00000107074.8	ENSMUSG00000038304.15	Cd160	chr3	protein_coding	CD160 antigen
chr3	96737472	96757544	+	96736717	96757544	A5SS	0.2	50	50	ENSMUST00000135031.8	ENSMUSG00000038298.15	Pdzk1	chr3	protein_coding	PDZ domain containing 1
chr3	96739834	96757544	+	96736717	96757544	A5SS	0.2	50	50	ENSMUST00000135031.8	ENSMUSG00000038298.15	Pdzk1	chr3	protein_coding	PDZ domain containing 1
chr3	96740035	96757544	+	96736717	96757544	A5SS	0.2	50	50	ENSMUST00000135031.8	ENSMUSG00000038298.15	Pdzk1	chr3	protein_coding	PDZ domain containing 1
chr3	96740920	96757544	+	96736717	96757544	A5SS	0.2	50	50	ENSMUST00000135031.8	ENSMUSG00000038298.15	Pdzk1	chr3	protein_coding	PDZ domain containing 1
chr3	96739834	96757544	+	96737472	96757544	A5SS	0.25	50	50	ENSMUST00000138014.8	ENSMUSG00000038298.15	Pdzk1	chr3	protein_coding	PDZ domain containing 1
chr3	96740035	96757544	+	96737472	96757544	A5SS	0.25	50	50	ENSMUST00000138014.8	ENSMUSG00000038298.15	Pdzk1	chr3	protein_coding	PDZ domain containing 1
chr3	96740920	96757544	+	96737472	96757544	A5SS	0.25	50	50	ENSMUST00000138014.8	ENSMUSG00000038298.15	Pdzk1	chr3	protein_coding	PDZ domain containing 1
chr3	96739834	96757544	+	96740035	96757544	A5SS	0.2	50	50	ENSMUST00000107070.8	ENSMUSG00000038298.15	Pdzk1	chr3	protein_coding	PDZ domain containing 1
chr3	96740920	96757544	+	96740035	96757544	A5SS	0.2	50	50	ENSMUST00000107070.8	ENSMUSG00000038298.15	Pdzk1	chr3	protein_coding	PDZ domain containing 1
chr3	96740920	96757544	+	96739834	96757544	A5SS	0.2	50	50	ENSMUST00000107069.8	ENSMUSG00000038298.15	Pdzk1	chr3	protein_coding	PDZ domain containing 1
chr3	96797305	96800182	-	96797305;96798239	96798119;96800182	ES	0.5	50	50	ENSMUST00000029738.14	ENSMUSG00000028096.14	Gpr89	chr3	protein_coding	G protein-coupled receptor 89
chr3	96800920;96801731	96801548;96804649	-	96800920	96804649	cassetteExon	0.5	100	100	ENSMUST00000029738.14	ENSMUSG00000028096.14	Gpr89	chr3	protein_coding	G protein-coupled receptor 89
chr3	96787482	96787839	-	96787482	96787937	A5SS	0.5	50	50	ENSMUST00000029738.14	ENSMUSG00000028096.14	Gpr89	chr3	protein_coding	G protein-coupled receptor 89
chr3	96800283	96800833	-	96800283	96800814	A5SS	0.5	50	50	ENSMUST00000029738.14	ENSMUSG00000028096.14	Gpr89	chr3	protein_coding	G protein-coupled receptor 89
chr3	96939801	96957912	+	96879502	96957912	A5SS	0.33	50	50	ENSMUST00000199597.2	ENSMUSG00000057123.15	Gja5	chr3	protein_coding	gap junction protein, alpha 5
chr3	96945094	96957912	+	96879502	96957912	A5SS	0.33	50	50	ENSMUST00000199597.2	ENSMUSG00000057123.15	Gja5	chr3	protein_coding	gap junction protein, alpha 5
chr3	96939801	96957912	+	96939801;96945094	96945038;96957912	ES	0.5	50	50	ENSMUST00000132256.8	ENSMUSG00000057123.15	Gja5	chr3	protein_coding	gap junction protein, alpha 5
chr3	97075078	97075303	+	97073932	97075303	A5SS	0.5	50	50	ENSMUST00000090759.5	ENSMUSG00000028093.16	Acp6	chr3	protein_coding	acid phosphatase 6, lysophosphatidic
chr3	97131293	97134791	-	97131293	97134534	5pMXE	0.2	50	50	ENSMUST00000046521.14	ENSMUSG00000038256.16	Bcl9	chr3	protein_coding	B cell CLL/lymphoma 9
chr3	97131293	97135508	-	97131293	97134534	5pMXE	0.2	50	50	ENSMUST00000046521.14	ENSMUSG00000038256.16	Bcl9	chr3	protein_coding	B cell CLL/lymphoma 9
chr3	97131293	97136059	-	97131293	97134534	5pMXE	0.2	50	50	ENSMUST00000046521.14	ENSMUSG00000038256.16	Bcl9	chr3	protein_coding	B cell CLL/lymphoma 9
chr3	97131293	97205073	-	97131293	97134534	5pMXE	0.2	50	50	ENSMUST00000046521.14	ENSMUSG00000038256.16	Bcl9	chr3	protein_coding	B cell CLL/lymphoma 9
chr3	97131293	97136059	-	97131293	97135508	5pMXE	0.2	50	50	ENSMUST00000141861.8	ENSMUSG00000038256.16	Bcl9	chr3	protein_coding	B cell CLL/lymphoma 9
chr3	97131293	97205073	-	97131293	97135508	5pMXE	0.2	50	50	ENSMUST00000141861.8	ENSMUSG00000038256.16	Bcl9	chr3	protein_coding	B cell CLL/lymphoma 9
chr3	97131293	97134791	-	97131293	97135508	A5SS	0.2	50	50	ENSMUST00000141861.8	ENSMUSG00000038256.16	Bcl9	chr3	protein_coding	B cell CLL/lymphoma 9
chr3	97131293	97205073	-	97131293	97136059	5pMXE	0.2	50	50	ENSMUST00000134695.8	ENSMUSG00000038256.16	Bcl9	chr3	protein_coding	B cell CLL/lymphoma 9
chr3	97131293	97134791	-	97131293	97136059	A5SS	0.2	50	50	ENSMUST00000134695.8	ENSMUSG00000038256.16	Bcl9	chr3	protein_coding	B cell CLL/lymphoma 9
chr3	97131293	97205073	-	97131293	97134791	5pMXE	0.2	50	50	ENSMUST00000135247.6	ENSMUSG00000038256.16	Bcl9	chr3	protein_coding	B cell CLL/lymphoma 9
chr3	97536511;97537044	97536888;97542827	+	97536511	97542827	cassetteExon	0.5	100	100	ENSMUST00000107050.8	ENSMUSG00000028088.15	Fmo5	chr3	protein_coding	flavin containing monooxygenase 5
chr3	97536235	97536335	+	97536217	97536335	A5SS	0.5	50	50	ENSMUST00000107050.8	ENSMUSG00000028088.15	Fmo5	chr3	protein_coding	flavin containing monooxygenase 5
chr3	97536511	97542827	+	97536511	97536888	3pMXE	0.5	50	50	ENSMUST00000133017.8	ENSMUSG00000028088.15	Fmo5	chr3	protein_coding	flavin containing monooxygenase 5
chr3	97566082	97570898	+	97566082;97569755	97569589;97570898	ES	0.5	50	50	ENSMUST00000143927.8	ENSMUSG00000038205.13	Prkab2	chr3	protein_coding	protein kinase, AMP-activated, beta 2 non-catalytic subunit
chr3	97571304;97574031	97573898;97574675	+	97571304	97574675	cassetteExon	0.5	100	100	ENSMUST00000143927.8	ENSMUSG00000038205.13	Prkab2	chr3	protein_coding	protein kinase, AMP-activated, beta 2 non-catalytic subunit
chr3	97571304	97574675	+	97574031	97574675	5pMXE	0.5	50	50	ENSMUST00000132719.2	ENSMUSG00000038205.13	Prkab2	chr3	protein_coding	protein kinase, AMP-activated, beta 2 non-catalytic subunit
chr3	97614373;97616950	97616798;97617537	-	97614373	97617537	cassetteExon	0.5	100	100	ENSMUST00000168438.9	ENSMUSG00000038170.16	Pde4dip	chr3	protein_coding	phosphodiesterase 4D interacting protein (myomegalin)
chr3	97662913	97663686	-	97662913	97664200	A5SS	0.5	50	50	ENSMUST00000168438.9	ENSMUSG00000038170.16	Pde4dip	chr3	protein_coding	phosphodiesterase 4D interacting protein (myomegalin)
chr3	97666246	97673790	-	97666246	97700055	A5SS	0.5	50	50	ENSMUST00000168438.9	ENSMUSG00000038170.16	Pde4dip	chr3	protein_coding	phosphodiesterase 4D interacting protein (myomegalin)
chr3	97751030	97775221	-	97751030	97795805	A5SS	0.5	50	50	ENSMUST00000168438.9	ENSMUSG00000038170.16	Pde4dip	chr3	protein_coding	phosphodiesterase 4D interacting protein (myomegalin)
chr3	97808736	97814541	+	97808736	97814537	A3SS	0.5	50	50	ENSMUST00000029476.9	ENSMUSG00000027879.10	Sec22b	chr3	protein_coding	SEC22 homolog B, vesicle trafficking protein
chr3	98241974	98244812	-	98241974	98247011	A5SS	0.5	50	50	ENSMUST00000065793.12	ENSMUSG00000053398.12	Phgdh	chr3	protein_coding	3-phosphoglycerate dehydrogenase
chr3	98289894	98317807	+	98289894	98586853	A3SS	0.33	50	50	ENSMUST00000196741.2	ENSMUSG00000050064.15	Zfp697	chr3	protein_coding	zinc finger protein 697
chr3	98289894	98332539	+	98289894	98586853	A3SS	0.33	50	50	ENSMUST00000196741.2	ENSMUSG00000050064.15	Zfp697	chr3	protein_coding	zinc finger protein 697
chr3	98289894	98332539	+	98289894	98317807	3pMXE	0.33	50	50	ENSMUST00000196194.5	ENSMUSG00000050064.15	Zfp697	chr3	protein_coding	zinc finger protein 697
chr3	98363895	98364208	-	98363895	98364328	A5SS	0.5	50	50	ENSMUST00000167753.8	ENSMUSG00000090817.8	Gm4450	chr3	protein_coding	predicted gene 4450
chr3	98627057	98631149	-	98627100	98631149	A3SS	0.5	50	50	ENSMUST00000107022.8	ENSMUSG00000063730.14	Hsd3b2	chr3	protein_coding	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2
chr3	98650011;98651303	98651139;98660627	-	98650011	98660627	cassetteExon	0.5	100	100	ENSMUST00000107018.8	ENSMUSG00000062410.15	Hsd3b3	chr3	protein_coding	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3
chr3	98669669	98670327	-	98660779	98670327	A3SS	0.5	50	50	ENSMUST00000107018.8	ENSMUSG00000062410.15	Hsd3b3	chr3	protein_coding	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3
chr3	98715245	98721498	-	98715245;98718424	98718218;98721498	ES	0.5	50	50	ENSMUST00000029463.13	ENSMUSG00000027869.15	Hsd3b6	chr3	protein_coding	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 6
chr3	98715245	98721498	-	98715245	98718218	5pMXE	0.5	50	50	ENSMUST00000170847.2	ENSMUSG00000027869.15	Hsd3b6	chr3	protein_coding	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 6
chr3	98765342	98766988	-	98765342;98765657	98765468;98766988	ES	0.5	50	50	ENSMUST00000107016.10	ENSMUSG00000027871.17	Hsd3b1	chr3	protein_coding	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1
chr3	99048504	99111852	+	99048504;99095054	99094797;99111852	ES	0.5	50	50	ENSMUST00000004343.7	ENSMUSG00000004233.15	Wars2	chr3	protein_coding	tryptophanyl tRNA synthetase 2 (mitochondrial)
chr3	99112626	99123775	+	99112626;99122090	99121972;99123775	ES	0.5	50	50	ENSMUST00000004343.7	ENSMUSG00000004233.15	Wars2	chr3	protein_coding	tryptophanyl tRNA synthetase 2 (mitochondrial)
chr3	99112626;99112766	99112716;99121972	+	99112626	99121972	cassetteExon	0.5	100	100	ENSMUST00000004343.7	ENSMUSG00000004233.15	Wars2	chr3	protein_coding	tryptophanyl tRNA synthetase 2 (mitochondrial)
chr3	99112626	99112716	+	99112626	99142795	A3SS	0.25	50	50	ENSMUST00000145650.8	ENSMUSG00000004233.15	Wars2	chr3	protein_coding	tryptophanyl tRNA synthetase 2 (mitochondrial)
chr3	99112626	99121972	+	99112626	99142795	A3SS	0.25	50	50	ENSMUST00000145650.8	ENSMUSG00000004233.15	Wars2	chr3	protein_coding	tryptophanyl tRNA synthetase 2 (mitochondrial)
chr3	99112626	99123775	+	99112626	99142795	A3SS	0.25	50	50	ENSMUST00000145650.8	ENSMUSG00000004233.15	Wars2	chr3	protein_coding	tryptophanyl tRNA synthetase 2 (mitochondrial)
chr3	99112626	99112716	+	99112626	99123775	A3SS	0.25	50	50	ENSMUST00000198044.2	ENSMUSG00000004233.15	Wars2	chr3	protein_coding	tryptophanyl tRNA synthetase 2 (mitochondrial)
chr3	99161401	99216146	+	99147762	99216146	A5SS	0.33	50	50	ENSMUST00000151606.8	ENSMUSG00000027868.12	Tbx15	chr3	protein_coding	T-box 15
chr3	99203940	99216146	+	99147762	99216146	A5SS	0.33	50	50	ENSMUST00000151606.8	ENSMUSG00000027868.12	Tbx15	chr3	protein_coding	T-box 15
chr3	99203940	99216146	+	99161401	99216146	A5SS	0.33	50	50	ENSMUST00000029462.10	ENSMUSG00000027868.12	Tbx15	chr3	protein_coding	T-box 15
chr3	99847384	99874410	+	99847384	99867185	3pMXE	0.5	50	50	ENSMUST00000127518.2	ENSMUSG00000027867.11	Spag17	chr3	protein_coding	sperm associated antigen 17
chr3	100011710	100011964	-	100010517	100011964	A3SS	0.5	50	50	ENSMUST00000145279.9	ENSMUSG00000085244.9	Spag17os	chr3	lncRNA	sperm associated antigen 17, opposite strand
chr3	100064751	100067082	-	100064758	100067082	A3SS	0.5	50	50	ENSMUST00000052120.14	ENSMUSG00000033285.16	Wdr3	chr3	protein_coding	WD repeat domain 3
chr3	100067236	100068336	-	100067291	100068336	A3SS	0.33	50	50	ENSMUST00000052120.14	ENSMUSG00000033285.16	Wdr3	chr3	protein_coding	WD repeat domain 3
chr3	100068197	100068336	-	100067291	100068336	A3SS	0.33	50	50	ENSMUST00000052120.14	ENSMUSG00000033285.16	Wdr3	chr3	protein_coding	WD repeat domain 3
chr3	100068538	100069599	-	100068538	100069660	A5SS	0.5	50	50	ENSMUST00000052120.14	ENSMUSG00000033285.16	Wdr3	chr3	protein_coding	WD repeat domain 3
chr3	100067236;100068197	100068134;100068336	-	100067236	100068336	cassetteExon	0.5	100	100	ENSMUST00000146989.8	ENSMUSG00000033285.16	Wdr3	chr3	protein_coding	WD repeat domain 3
chr3	100069981;100076401	100076256;100077252	+	100069981	100077252	cassetteExon	0.5	100	100	ENSMUST00000029459.10	ENSMUSG00000027865.11	Gdap2	chr3	protein_coding	ganglioside-induced differentiation-associated-protein 2
chr3	100101945	100109327	+	100101945	100103859	A3SS&ES	0.5	50	50	ENSMUST00000029459.10	ENSMUSG00000027865.11	Gdap2	chr3	protein_coding	ganglioside-induced differentiation-associated-protein 2
chr3	100359392;100373691	100373590;100396410	-	100359392	100396410	cassetteExon	0.5	100	100	ENSMUST00000128107.8	ENSMUSG00000044468.15	Tent5c	chr3	protein_coding	terminal nucleotidyltransferase 5C
chr3	100380781	100396410	-	100359392	100396410	A3SS	0.33	50	50	ENSMUST00000128107.8	ENSMUSG00000044468.15	Tent5c	chr3	protein_coding	terminal nucleotidyltransferase 5C
chr3	100380781	100396410	-	100373691	100396410	A3SS	0.33	50	50	ENSMUST00000139833.2	ENSMUSG00000044468.15	Tent5c	chr3	protein_coding	terminal nucleotidyltransferase 5C
chr3	100539914	100554308	-	100539914;100551937	100551857;100554308	ES	0.5	50	50	ENSMUST00000008907.14	ENSMUSG00000008763.17	Man1a2	chr3	protein_coding	mannosidase, alpha, class 1A, member 2
chr3	100551937	100559855	-	100551937;100554426	100554308;100559855	ES	0.5	50	50	ENSMUST00000008907.14	ENSMUSG00000008763.17	Man1a2	chr3	protein_coding	mannosidase, alpha, class 1A, member 2
chr3	100539914;100554426	100554308;100559855	-	100539914;100551937	100551857;100559855	MXE	0.5	100	100	ENSMUST00000133642.2	ENSMUSG00000008763.17	Man1a2	chr3	protein_coding	mannosidase, alpha, class 1A, member 2
chr3	100539914	100554308	-	100551937	100554308	3pMXE	0.5	50	50	ENSMUST00000196250.2	ENSMUSG00000008763.17	Man1a2	chr3	protein_coding	mannosidase, alpha, class 1A, member 2
chr3	100563590	100591877	-	100554426	100591877	A3SS	0.5	50	50	ENSMUST00000196250.2	ENSMUSG00000008763.17	Man1a2	chr3	protein_coding	mannosidase, alpha, class 1A, member 2
chr3	100551937	100559855	-	100551937	100554308	A5SS&ES	0.5	50	50	ENSMUST00000196250.2	ENSMUSG00000008763.17	Man1a2	chr3	protein_coding	mannosidase, alpha, class 1A, member 2
chr3	100554426	100559855	-	100554426	100591877	A5SS	0.5	50	50	ENSMUST00000196250.2	ENSMUSG00000008763.17	Man1a2	chr3	protein_coding	mannosidase, alpha, class 1A, member 2
chr3	100591943	100592458	-	100592003	100592458	A3SS	0.5	50	50	ENSMUST00000123442.2	ENSMUSG00000008763.17	Man1a2	chr3	protein_coding	mannosidase, alpha, class 1A, member 2
chr3	100837259;100837394	100837342;100838747	+	100837259	100838747	cassetteExon	0.5	100	100	ENSMUST00000094048.10	ENSMUSG00000033233.18	Trim45	chr3	protein_coding	tripartite motif-containing 45
chr3	100854884	100855389	-	100854884	100855461	A5SS	0.5	50	50	ENSMUST00000076941.12	ENSMUSG00000033222.17	Ttf2	chr3	protein_coding	transcription termination factor, RNA polymerase II
chr3	100858499	100859865	-	100857242	100859865	A3SS	0.5	50	50	ENSMUST00000151697.2	ENSMUSG00000033222.17	Ttf2	chr3	protein_coding	transcription termination factor, RNA polymerase II
chr3	100857242	100857500	-	100857242	100859865	A5SS	0.5	50	50	ENSMUST00000151697.2	ENSMUSG00000033222.17	Ttf2	chr3	protein_coding	transcription termination factor, RNA polymerase II
chr3	100928048	100929462	-	100928048	100936769	A5SS	0.5	50	50	ENSMUST00000147399.9	ENSMUSG00000086564.10	Cd101	chr3	protein_coding	CD101 antigen
chr3	100980506	100980576	-	100980506	100984359	A5SS	0.5	50	50	ENSMUST00000102694.4	ENSMUSG00000027864.10	Ptgfrn	chr3	protein_coding	prostaglandin F2 receptor negative regulator
chr3	101338909;101340290	101340231;101342647	+	101338909	101342647	cassetteExon	0.5	100	100	ENSMUST00000043983.11	ENSMUSG00000042035.12	Igsf3	chr3	protein_coding	immunoglobulin superfamily, member 3
chr3	101742580	101756224	-	101742580	101743237	5pMXE	0.5	50	50	ENSMUST00000061831.11	ENSMUSG00000044313.14	Mab21l3	chr3	protein_coding	mab-21-like 3
chr3	101787503	101790776	-	101787540	101790776	A3SS	0.5	50	50	ENSMUST00000106928.10	ENSMUSG00000033147.17	Slc22a15	chr3	protein_coding	solute carrier family 22 (organic anion/cation transporter), member 15
chr3	101787503	101822621	-	101805385	101822621	A3SS&ES	0.5	50	50	ENSMUST00000106928.10	ENSMUSG00000033147.17	Slc22a15	chr3	protein_coding	solute carrier family 22 (organic anion/cation transporter), member 15
chr3	101829815	101831348	-	101822833	101831348	A3SS	0.5	50	50	ENSMUST00000106928.10	ENSMUSG00000033147.17	Slc22a15	chr3	protein_coding	solute carrier family 22 (organic anion/cation transporter), member 15
chr3	101768305	101770217	-	101768305	101770221	A5SS	0.5	50	50	ENSMUST00000106928.10	ENSMUSG00000033147.17	Slc22a15	chr3	protein_coding	solute carrier family 22 (organic anion/cation transporter), member 15
chr3	101790905	101804097	-	101790905	101804426	A5SS	0.5	50	50	ENSMUST00000106928.10	ENSMUSG00000033147.17	Slc22a15	chr3	protein_coding	solute carrier family 22 (organic anion/cation transporter), member 15
chr3	101787503	101790776	-	101787503	101822621	A5SS	0.5	50	50	ENSMUST00000190824.7	ENSMUSG00000033147.17	Slc22a15	chr3	protein_coding	solute carrier family 22 (organic anion/cation transporter), member 15
chr3	102035302;102040414	102040406;102040693	+	102035302	102040693	cassetteExon	0.5	100	100	ENSMUST00000029454.12	ENSMUSG00000027861.14	Casq2	chr3	protein_coding	calsequestrin 2
chr3	102033197	102033865	+	102027306	102033865	A5SS	0.5	50	50	ENSMUST00000029454.12	ENSMUSG00000027861.14	Casq2	chr3	protein_coding	calsequestrin 2
chr3	102017640	102020381	+	102017640	102027233	A3SS	0.5	50	50	ENSMUST00000164123.2	ENSMUSG00000027861.14	Casq2	chr3	protein_coding	calsequestrin 2
chr3	102024291	102027233	+	102017640	102027233	A5SS	0.5	50	50	ENSMUST00000164123.2	ENSMUSG00000027861.14	Casq2	chr3	protein_coding	calsequestrin 2
chr3	102072803;102073127	102073089;102074154	-	102072803	102074154	cassetteExon	0.5	100	100	ENSMUST00000029453.13	ENSMUSG00000027860.16	Vangl1	chr3	protein_coding	VANGL planar cell polarity 1
chr3	102104292	102105157	-	102104292	102111828	A5SS	0.25	50	50	ENSMUST00000029453.13	ENSMUSG00000027860.16	Vangl1	chr3	protein_coding	VANGL planar cell polarity 1
chr3	102104292	102111003	-	102104292	102111828	A5SS	0.25	50	50	ENSMUST00000029453.13	ENSMUSG00000027860.16	Vangl1	chr3	protein_coding	VANGL planar cell polarity 1
chr3	102104292	102111139	-	102104292	102111828	A5SS	0.25	50	50	ENSMUST00000029453.13	ENSMUSG00000027860.16	Vangl1	chr3	protein_coding	VANGL planar cell polarity 1
chr3	102070719	102072691	-	102070720	102072691	A3SS	0.5	50	50	ENSMUST00000159388.8	ENSMUSG00000027860.16	Vangl1	chr3	protein_coding	VANGL planar cell polarity 1
chr3	102104292	102105157	-	102104292	102111139	A5SS	0.25	50	50	ENSMUST00000159388.8	ENSMUSG00000027860.16	Vangl1	chr3	protein_coding	VANGL planar cell polarity 1
chr3	102104292	102111003	-	102104292	102111139	A5SS	0.25	50	50	ENSMUST00000159388.8	ENSMUSG00000027860.16	Vangl1	chr3	protein_coding	VANGL planar cell polarity 1
chr3	102072803	102074154	-	102072803	102073089	5pMXE	0.5	50	50	ENSMUST00000162361.2	ENSMUSG00000027860.16	Vangl1	chr3	protein_coding	VANGL planar cell polarity 1
chr3	102104292	102111003	-	102104292	102105157	5pMXE	0.25	50	50	ENSMUST00000159586.2	ENSMUSG00000027860.16	Vangl1	chr3	protein_coding	VANGL planar cell polarity 1
chr3	102170195;102175595	102175425;102186229	+	102170195	102186229	cassetteExon	0.5	100	100	ENSMUST00000196720.5	ENSMUSG00000105891.5	A230001M10Rik	chr3	lncRNA	RIKEN cDNA A230001M10 gene
chr3	102186614	102195256	+	102186614	102328980	A3SS	0.5	50	50	ENSMUST00000196720.5	ENSMUSG00000105891.5	A230001M10Rik	chr3	lncRNA	RIKEN cDNA A230001M10 gene
chr3	102377276;102417153	102417027;102421272	+	102377276	102421272	cassetteExon	0.5	100	100	ENSMUST00000035952.5	ENSMUSG00000027859.11	Ngf	chr3	protein_coding	nerve growth factor
chr3	102377276	102388156	+	102377276	102421272	A3SS	0.33	50	50	ENSMUST00000035952.5	ENSMUSG00000027859.11	Ngf	chr3	protein_coding	nerve growth factor
chr3	102396120	102421272	+	102377276	102421272	A5SS	0.33	50	50	ENSMUST00000035952.5	ENSMUSG00000027859.11	Ngf	chr3	protein_coding	nerve growth factor
chr3	102377276	102417027	+	102377276;102388312	102388156;102417027	ES	0.5	50	50	ENSMUST00000198168.5	ENSMUSG00000027859.11	Ngf	chr3	protein_coding	nerve growth factor
chr3	102396120	102421272	+	102417153	102421272	A5SS&ES	0.33	50	50	ENSMUST00000106925.9	ENSMUSG00000027859.11	Ngf	chr3	protein_coding	nerve growth factor
chr3	102642381	102664609	+	102642381;102657176	102657074;102664609	ES	0.5	50	50	ENSMUST00000029451.12	ENSMUSG00000027858.14	Tspan2	chr3	protein_coding	tetraspanin 2
chr3	102672584	102708660	+	102672584	102676193	3pMXE	0.5	50	50	ENSMUST00000029451.12	ENSMUSG00000027858.14	Tspan2	chr3	protein_coding	tetraspanin 2
chr3	102642631	102657074	+	102642381	102657074	A5SS	0.5	50	50	ENSMUST00000029451.12	ENSMUSG00000027858.14	Tspan2	chr3	protein_coding	tetraspanin 2
chr3	102685628	102689766	-	102685628;102689418	102689378;102689766	ES	0.5	50	50	ENSMUST00000029450.10	ENSMUSG00000027857.11	Tshb	chr3	protein_coding	thyroid stimulating hormone, beta subunit
chr3	102689418	102689964	-	102689418;102689812	102689766;102689964	ES	0.33	50	50	ENSMUST00000029450.10	ENSMUSG00000027857.11	Tshb	chr3	protein_coding	thyroid stimulating hormone, beta subunit
chr3	102685628	102689964	-	102685628;102689812	102689766;102689964	ES	0.33	50	50	ENSMUST00000172026.8	ENSMUSG00000027857.11	Tshb	chr3	protein_coding	thyroid stimulating hormone, beta subunit
chr3	102685628;102689418	102689378;102689964	-	102685628;102689812	102689766;102689964	MXE	0.5	100	100	ENSMUST00000172026.8	ENSMUSG00000027857.11	Tshb	chr3	protein_coding	thyroid stimulating hormone, beta subunit
chr3	102685628;102689418	102689378;102689964	-	102685628	102689964	cassetteExon	0.5	100	100	ENSMUST00000170856.6	ENSMUSG00000027857.11	Tshb	chr3	protein_coding	thyroid stimulating hormone, beta subunit
chr3	102685628;102689812	102689378;102689964	-	102685628	102689964	cassetteExon	0.5	100	100	ENSMUST00000170856.6	ENSMUSG00000027857.11	Tshb	chr3	protein_coding	thyroid stimulating hormone, beta subunit
chr3	102685628	102689964	-	102685628	102689766	5pMXE	0.33	50	50	ENSMUST00000197322.2	ENSMUSG00000027857.11	Tshb	chr3	protein_coding	thyroid stimulating hormone, beta subunit
chr3	102839011	102841521	-	102839011;102840123	102839959;102841521	ES	0.5	50	50	ENSMUST00000029448.11	ENSMUSG00000027855.14	Sycp1	chr3	protein_coding	synaptonemal complex protein 1
chr3	102842975	102843302	-	102842981	102843302	A3SS	0.5	50	50	ENSMUST00000029448.11	ENSMUSG00000027855.14	Sycp1	chr3	protein_coding	synaptonemal complex protein 1
chr3	102727998	102741081	-	102727998	102748178	A5SS	0.5	50	50	ENSMUST00000029448.11	ENSMUSG00000027855.14	Sycp1	chr3	protein_coding	synaptonemal complex protein 1
chr3	102852633	102853350	-	102852676	102853350	A3SS	0.5	50	50	ENSMUST00000058899.13	ENSMUSG00000048938.13	Nr1h5	chr3	protein_coding	nuclear receptor subfamily 1, group H, member 5
chr3	102853472	102855091	-	102853472	102855067	A5SS	0.5	50	50	ENSMUST00000058899.13	ENSMUSG00000048938.13	Nr1h5	chr3	protein_coding	nuclear receptor subfamily 1, group H, member 5
chr3	102859627	102862012	-	102859627	102861838	A5SS	0.5	50	50	ENSMUST00000058899.13	ENSMUSG00000048938.13	Nr1h5	chr3	protein_coding	nuclear receptor subfamily 1, group H, member 5
chr3	102904725	102905806	+	102904701	102905806	A5SS	0.33	50	50	ENSMUST00000029447.12	ENSMUSG00000027854.13	Sike1	chr3	protein_coding	suppressor of IKBKE 1
chr3	102903283	102905806	+	102904701	102905806	A5SS	0.33	50	50	ENSMUST00000151065.2	ENSMUSG00000027854.13	Sike1	chr3	protein_coding	suppressor of IKBKE 1
chr3	102903283	102903472	+	102903283	102905806	A3SS	0.5	50	50	ENSMUST00000119450.2	ENSMUSG00000027854.13	Sike1	chr3	protein_coding	suppressor of IKBKE 1
chr3	102904725	102905806	+	102903283	102905806	A5SS	0.33	50	50	ENSMUST00000119450.2	ENSMUSG00000027854.13	Sike1	chr3	protein_coding	suppressor of IKBKE 1
chr3	102927985	102946008	+	102927985;102936528	102936105;102946008	ES	0.25	50	50	ENSMUST00000029446.13	ENSMUSG00000068823.11	Csde1	chr3	protein_coding	cold shock domain containing E1, RNA binding
chr3	102936528	102947249	+	102936528;102946206	102946008;102947249	ES	0.33	50	50	ENSMUST00000029446.13	ENSMUSG00000068823.11	Csde1	chr3	protein_coding	cold shock domain containing E1, RNA binding
chr3	102947358	102948461	+	102947358;102947849	102947757;102948461	ES	0.5	50	50	ENSMUST00000029446.13	ENSMUSG00000068823.11	Csde1	chr3	protein_coding	cold shock domain containing E1, RNA binding
chr3	102936528;102944037	102943891;102946008	+	102936528	102946008	cassetteExon	0.5	100	100	ENSMUST00000029446.13	ENSMUSG00000068823.11	Csde1	chr3	protein_coding	cold shock domain containing E1, RNA binding
chr3	102951247	102951894	+	102951247	102951945	A3SS	0.33	50	50	ENSMUST00000029446.13	ENSMUSG00000068823.11	Csde1	chr3	protein_coding	cold shock domain containing E1, RNA binding
chr3	102951247	102952075	+	102951247	102951945	A3SS	0.33	50	50	ENSMUST00000029446.13	ENSMUSG00000068823.11	Csde1	chr3	protein_coding	cold shock domain containing E1, RNA binding
chr3	102928207	102936105	+	102927985	102936105	A5SS	0.5	50	50	ENSMUST00000029446.13	ENSMUSG00000068823.11	Csde1	chr3	protein_coding	cold shock domain containing E1, RNA binding
chr3	102937596	102946008	+	102936528	102946008	A5SS	0.25	50	50	ENSMUST00000029446.13	ENSMUSG00000068823.11	Csde1	chr3	protein_coding	cold shock domain containing E1, RNA binding
chr3	102947103	102947249	+	102946206	102947249	A5SS	0.33	50	50	ENSMUST00000029446.13	ENSMUSG00000068823.11	Csde1	chr3	protein_coding	cold shock domain containing E1, RNA binding
chr3	102927985;102936528	102936105;102947249	+	102927985;102946206	102946008;102947249	MXE	0.5	100	100	ENSMUST00000197827.5	ENSMUSG00000068823.11	Csde1	chr3	protein_coding	cold shock domain containing E1, RNA binding
chr3	102937596	102946008	+	102927985	102946008	A5SS	0.25	50	50	ENSMUST00000197827.5	ENSMUSG00000068823.11	Csde1	chr3	protein_coding	cold shock domain containing E1, RNA binding
chr3	102944037	102946008	+	102927985	102946008	A5SS	0.25	50	50	ENSMUST00000197827.5	ENSMUSG00000068823.11	Csde1	chr3	protein_coding	cold shock domain containing E1, RNA binding
chr3	102936528	102943891	+	102936528	102947249	A3SS	0.33	50	50	ENSMUST00000199240.5	ENSMUSG00000068823.11	Csde1	chr3	protein_coding	cold shock domain containing E1, RNA binding
chr3	102947103	102947249	+	102936528	102947249	A5SS	0.33	50	50	ENSMUST00000199240.5	ENSMUSG00000068823.11	Csde1	chr3	protein_coding	cold shock domain containing E1, RNA binding
chr3	102937596	102946008	+	102944037	102946008	A5SS&ES	0.25	50	50	ENSMUST00000199420.5	ENSMUSG00000068823.11	Csde1	chr3	protein_coding	cold shock domain containing E1, RNA binding
chr3	102927985	102946008	+	102936528	102946008	A5SS&ES	0.25	50	50	ENSMUST00000197488.5	ENSMUSG00000068823.11	Csde1	chr3	protein_coding	cold shock domain containing E1, RNA binding
chr3	102936528	102947249	+	102936528	102946008	A3SS	0.33	50	50	ENSMUST00000198906.2	ENSMUSG00000068823.11	Csde1	chr3	protein_coding	cold shock domain containing E1, RNA binding
chr3	102951247	102952075	+	102951247	102951894	A3SS	0.33	50	50	ENSMUST00000195889.5	ENSMUSG00000068823.11	Csde1	chr3	protein_coding	cold shock domain containing E1, RNA binding
chr3	102970769	102971550	+	102970769;102971473	102971432;102971550	ES	0.5	50	50	ENSMUST00000029445.13	ENSMUSG00000027852.15	Nras	chr3	protein_coding	neuroblastoma ras oncogene
chr3	102966348;102967350	102967255;102967517	+	102966348	102967517	cassetteExon	0.5	100	100	ENSMUST00000029445.13	ENSMUSG00000027852.15	Nras	chr3	protein_coding	neuroblastoma ras oncogene
chr3	102966348;102967356	102967255;102967517	+	102966348	102967517	cassetteExon	0.5	100	100	ENSMUST00000029445.13	ENSMUSG00000027852.15	Nras	chr3	protein_coding	neuroblastoma ras oncogene
chr3	102965945	102966221	+	102965756	102966221	A5SS	0.33	50	50	ENSMUST00000029445.13	ENSMUSG00000027852.15	Nras	chr3	protein_coding	neuroblastoma ras oncogene
chr3	102966146	102966221	+	102965756	102966221	A5SS	0.33	50	50	ENSMUST00000029445.13	ENSMUSG00000027852.15	Nras	chr3	protein_coding	neuroblastoma ras oncogene
chr3	102967350	102967517	+	102967356	102967517	A5SS	0.33	50	50	ENSMUST00000200457.5	ENSMUSG00000027852.15	Nras	chr3	protein_coding	neuroblastoma ras oncogene
chr3	102966146	102966221	+	102965945	102966221	A5SS	0.33	50	50	ENSMUST00000199367.5	ENSMUSG00000027852.15	Nras	chr3	protein_coding	neuroblastoma ras oncogene
chr3	102981433	102986345	+	102981433;102982734	102982723;102986345	ES	0.5	50	50	ENSMUST00000090715.13	ENSMUSG00000070385.13	Ampd1	chr3	protein_coding	adenosine monophosphate deaminase 1
chr3	103001842	103002093	+	103001842	103002030	A3SS	0.5	50	50	ENSMUST00000090715.13	ENSMUSG00000070385.13	Ampd1	chr3	protein_coding	adenosine monophosphate deaminase 1
chr3	103041167;103044629	103044459;103048375	+	103041167	103048375	cassetteExon	0.5	100	100	ENSMUST00000173206.8	ENSMUSG00000007379.16	Dennd2c	chr3	protein_coding	DENN/MADD domain containing 2C
chr3	103034966	103038669	+	103010054	103038669	A5SS	0.5	50	50	ENSMUST00000173206.8	ENSMUSG00000007379.16	Dennd2c	chr3	protein_coding	DENN/MADD domain containing 2C
chr3	103047847	103048375	+	103041167	103048375	A5SS	0.33	50	50	ENSMUST00000173206.8	ENSMUSG00000007379.16	Dennd2c	chr3	protein_coding	DENN/MADD domain containing 2C
chr3	103053876	103056357	+	103053872	103056357	A5SS	0.5	50	50	ENSMUST00000173206.8	ENSMUSG00000007379.16	Dennd2c	chr3	protein_coding	DENN/MADD domain containing 2C
chr3	103047847	103048375	+	103044629	103048375	A5SS	0.33	50	50	ENSMUST00000166143.9	ENSMUSG00000007379.16	Dennd2c	chr3	protein_coding	DENN/MADD domain containing 2C
chr3	103079356	103080550	+	103079356	103080591	A3SS	0.5	50	50	ENSMUST00000005830.15	ENSMUSG00000005687.15	Bcas2	chr3	protein_coding	breast carcinoma amplified sequence 2
chr3	103218829	103231961	+	103218829;103228977	103228861;103231961	ES	0.5	50	50	ENSMUST00000029444.13	ENSMUSG00000033014.13	Trim33	chr3	protein_coding	tripartite motif-containing 33
chr3	103259471	103261013	+	103259471;103260933	103260883;103261013	ES	0.5	50	50	ENSMUST00000029444.13	ENSMUSG00000033014.13	Trim33	chr3	protein_coding	tripartite motif-containing 33
chr3	103218829	103231961	+	103228977	103231961	5pMXE	0.5	50	50	ENSMUST00000196678.2	ENSMUSG00000033014.13	Trim33	chr3	protein_coding	tripartite motif-containing 33
chr3	103259471	103261013	+	103259471	103260883	A3SS	0.5	50	50	ENSMUST00000197365.2	ENSMUSG00000033014.13	Trim33	chr3	protein_coding	tripartite motif-containing 33
chr3	103534448	103539763	+	103534448	103538218	3pMXE	0.5	50	50	ENSMUST00000121834.8	ENSMUSG00000027849.20	Syt6	chr3	protein_coding	synaptotagmin VI
chr3	103482856	103492741	+	103482856	103492658	A3SS	0.5	50	50	ENSMUST00000121834.8	ENSMUSG00000027849.20	Syt6	chr3	protein_coding	synaptotagmin VI
chr3	103483617	103492658	+	103482856	103492658	A5SS	0.33	50	50	ENSMUST00000121834.8	ENSMUSG00000027849.20	Syt6	chr3	protein_coding	synaptotagmin VI
chr3	103483763	103492658	+	103482856	103492658	A5SS	0.33	50	50	ENSMUST00000121834.8	ENSMUSG00000027849.20	Syt6	chr3	protein_coding	synaptotagmin VI
chr3	103534448	103539763	+	103534448;103538285	103538218;103539763	ES	0.5	50	50	ENSMUST00000090697.11	ENSMUSG00000027849.20	Syt6	chr3	protein_coding	synaptotagmin VI
chr3	103482922	103492741	+	103482856	103492741	A5SS	0.25	50	50	ENSMUST00000132325.10	ENSMUSG00000027849.20	Syt6	chr3	protein_coding	synaptotagmin VI
chr3	103483617	103492741	+	103482856	103492741	A5SS	0.25	50	50	ENSMUST00000132325.10	ENSMUSG00000027849.20	Syt6	chr3	protein_coding	synaptotagmin VI
chr3	103483763	103492741	+	103482856	103492741	A5SS	0.25	50	50	ENSMUST00000132325.10	ENSMUSG00000027849.20	Syt6	chr3	protein_coding	synaptotagmin VI
chr3	103483617	103492741	+	103482922	103492741	A5SS	0.25	50	50	ENSMUST00000151985.2	ENSMUSG00000027849.20	Syt6	chr3	protein_coding	synaptotagmin VI
chr3	103483763	103492741	+	103482922	103492741	A5SS	0.25	50	50	ENSMUST00000151985.2	ENSMUSG00000027849.20	Syt6	chr3	protein_coding	synaptotagmin VI
chr3	103483617	103492741	+	103483617	103492658	A3SS	0.5	50	50	ENSMUST00000183637.8	ENSMUSG00000027849.20	Syt6	chr3	protein_coding	synaptotagmin VI
chr3	103483763	103492658	+	103483617	103492658	A5SS	0.33	50	50	ENSMUST00000183637.8	ENSMUSG00000027849.20	Syt6	chr3	protein_coding	synaptotagmin VI
chr3	103483763	103492658	+	103483763	103492741	A3SS	0.5	50	50	ENSMUST00000117221.9	ENSMUSG00000027849.20	Syt6	chr3	protein_coding	synaptotagmin VI
chr3	103483617	103492741	+	103483763	103492741	A5SS	0.25	50	50	ENSMUST00000117221.9	ENSMUSG00000027849.20	Syt6	chr3	protein_coding	synaptotagmin VI
chr3	103528222	103532813	+	103528222	103552381	A3SS	0.5	50	50	ENSMUST00000118563.3	ENSMUSG00000027849.20	Syt6	chr3	protein_coding	synaptotagmin VI
chr3	103658234	103661517	-	103658234;103660830	103660696;103661517	ES	0.5	50	50	ENSMUST00000118317.8	ENSMUSG00000008730.18	Hipk1	chr3	protein_coding	homeodomain interacting protein kinase 1
chr3	103661638;103664066	103663940;103665851	-	103661638	103665851	cassetteExon	0.5	100	100	ENSMUST00000118317.8	ENSMUSG00000008730.18	Hipk1	chr3	protein_coding	homeodomain interacting protein kinase 1
chr3	103685615	103698311	-	103685615	103698709	A5SS	0.5	50	50	ENSMUST00000118317.8	ENSMUSG00000008730.18	Hipk1	chr3	protein_coding	homeodomain interacting protein kinase 1
chr3	103679334;103679697	103679619;103681450	+	103679334	103681450	cassetteExon	0.5	100	100	ENSMUST00000154868.2	ENSMUSG00000085754.8	Gm15886	chr3	lncRNA	predicted gene 15886
chr3	103684822	103684937	+	103684822	103685038	A3SS	0.5	50	50	ENSMUST00000123155.8	ENSMUSG00000085754.8	Gm15886	chr3	lncRNA	predicted gene 15886
chr3	103685433	103685561	+	103685433	103685545	A3SS	0.5	50	50	ENSMUST00000123155.8	ENSMUSG00000085754.8	Gm15886	chr3	lncRNA	predicted gene 15886
chr3	103679334	103681450	+	103679697	103681450	5pMXE	0.5	50	50	ENSMUST00000138430.2	ENSMUSG00000085754.8	Gm15886	chr3	lncRNA	predicted gene 15886
chr3	103714892;103715414	103715388;103716216	-	103714892	103716216	cassetteExon	0.5	100	100	ENSMUST00000063502.13	ENSMUSG00000027845.16	Dclre1b	chr3	protein_coding	DNA cross-link repair 1B
chr3	103714892;103715553	103715388;103716216	-	103714892	103716216	cassetteExon	0.5	100	100	ENSMUST00000063502.13	ENSMUSG00000027845.16	Dclre1b	chr3	protein_coding	DNA cross-link repair 1B
chr3	103711361	103714710	-	103711371	103714710	A3SS	0.5	50	50	ENSMUST00000063502.13	ENSMUSG00000027845.16	Dclre1b	chr3	protein_coding	DNA cross-link repair 1B
chr3	103715414	103716216	-	103715553	103716216	A3SS	0.33	50	50	ENSMUST00000029435.15	ENSMUSG00000027845.16	Dclre1b	chr3	protein_coding	DNA cross-link repair 1B
chr3	103714892	103716216	-	103714892	103715388	A5SS	0.5	50	50	ENSMUST00000147894.3	ENSMUSG00000027845.16	Dclre1b	chr3	protein_coding	DNA cross-link repair 1B
chr3	103717373	103720093	+	103717373;103719625	103719401;103720093	ES	0.5	50	50	ENSMUST00000076599.8	ENSMUSG00000032952.12	Ap4b1	chr3	protein_coding	adaptor-related protein complex AP-4, beta 1
chr3	103720223	103722141	+	103720223;103720723	103720576;103722141	ES	0.33	50	50	ENSMUST00000076599.8	ENSMUSG00000032952.12	Ap4b1	chr3	protein_coding	adaptor-related protein complex AP-4, beta 1
chr3	103722637	103726120	+	103722637;103725159	103725076;103726120	ES	0.5	50	50	ENSMUST00000076599.8	ENSMUSG00000032952.12	Ap4b1	chr3	protein_coding	adaptor-related protein complex AP-4, beta 1
chr3	103725159	103727570	+	103725159;103726223	103726120;103727570	ES	0.5	50	50	ENSMUST00000076599.8	ENSMUSG00000032952.12	Ap4b1	chr3	protein_coding	adaptor-related protein complex AP-4, beta 1
chr3	103722637;103725159	103725076;103727570	+	103722637;103726223	103726120;103727570	MXE	0.5	100	100	ENSMUST00000106823.8	ENSMUSG00000032952.12	Ap4b1	chr3	protein_coding	adaptor-related protein complex AP-4, beta 1
chr3	103717373;103720223	103720093;103722141	+	103717373	103722141	cassetteExon	0.5	100	100	ENSMUST00000200377.5	ENSMUSG00000032952.12	Ap4b1	chr3	protein_coding	adaptor-related protein complex AP-4, beta 1
chr3	103717373	103719401	+	103717373	103722141	A3SS	0.33	50	50	ENSMUST00000200377.5	ENSMUSG00000032952.12	Ap4b1	chr3	protein_coding	adaptor-related protein complex AP-4, beta 1
chr3	103720723	103722141	+	103717373	103722141	A5SS	0.33	50	50	ENSMUST00000200377.5	ENSMUSG00000032952.12	Ap4b1	chr3	protein_coding	adaptor-related protein complex AP-4, beta 1
chr3	103743586	103760580	+	103743586	103745849	3pMXE	0.5	50	50	ENSMUST00000199710.2	ENSMUSG00000105053.2	Gm43064	chr3	protein_coding	predicted gene 43064
chr3	103754240	103760580	+	103743586	103760580	A5SS	0.33	50	50	ENSMUST00000106822.2	ENSMUSG00000044165.13	Bcl2l15	chr3	protein_coding	BCLl2-like 15
chr3	103759708	103760580	+	103743586	103760580	A5SS	0.33	50	50	ENSMUST00000106822.2	ENSMUSG00000044165.13	Bcl2l15	chr3	protein_coding	BCLl2-like 15
chr3	103759708	103760580	+	103754240	103760580	A5SS	0.33	50	50	ENSMUST00000199772.2	ENSMUSG00000044165.13	Bcl2l15	chr3	protein_coding	BCLl2-like 15
chr3	103796172	103809430	+	103796172;103797599	103797572;103809430	ES	0.5	50	50	ENSMUST00000146071.8	ENSMUSG00000027843.14	Ptpn22	chr3	protein_coding	protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
chr3	103809507	103810686	+	103809507	103810694	A3SS	0.5	50	50	ENSMUST00000146071.8	ENSMUSG00000027843.14	Ptpn22	chr3	protein_coding	protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
chr3	103767993	103780961	+	103767806	103780961	A5SS	0.5	50	50	ENSMUST00000146071.8	ENSMUSG00000027843.14	Ptpn22	chr3	protein_coding	protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
chr3	103836340	103861421	+	103836340;103861090	103860953;103861421	ES	0.5	50	50	ENSMUST00000051139.13	ENSMUSG00000044098.15	Rsbn1	chr3	protein_coding	rosbin, round spermatid basic protein 1
chr3	103836340;103837470	103837353;103860953	+	103836340	103860953	cassetteExon	0.5	100	100	ENSMUST00000051139.13	ENSMUSG00000044098.15	Rsbn1	chr3	protein_coding	rosbin, round spermatid basic protein 1
chr3	103836340	103837353	+	103836340	103861421	A3SS	0.33	50	50	ENSMUST00000185731.4	ENSMUSG00000044098.15	Rsbn1	chr3	protein_coding	rosbin, round spermatid basic protein 1
chr3	103876446	103889202	+	103876446;103877126	103877070;103889202	ES	0.5	50	50	ENSMUST00000117150.8	ENSMUSG00000058388.15	Phtf1	chr3	protein_coding	putative homeodomain transcription factor 1
chr3	103889271	103893069	+	103889271;103890420	103890262;103893069	ES	0.5	50	50	ENSMUST00000117150.8	ENSMUSG00000058388.15	Phtf1	chr3	protein_coding	putative homeodomain transcription factor 1
chr3	103893225	103895931	+	103893225;103894877	103894743;103895931	ES	0.5	50	50	ENSMUST00000117150.8	ENSMUSG00000058388.15	Phtf1	chr3	protein_coding	putative homeodomain transcription factor 1
chr3	103894877	103898354	+	103894877;103896090	103895931;103898354	ES	0.5	50	50	ENSMUST00000117150.8	ENSMUSG00000058388.15	Phtf1	chr3	protein_coding	putative homeodomain transcription factor 1
chr3	103876103	103876371	+	103875549	103876371	A5SS	0.5	50	50	ENSMUST00000117150.8	ENSMUSG00000058388.15	Phtf1	chr3	protein_coding	putative homeodomain transcription factor 1
chr3	103893225;103894877	103894743;103898354	+	103893225;103896090	103895931;103898354	MXE	0.5	100	100	ENSMUST00000090685.11	ENSMUSG00000058388.15	Phtf1	chr3	protein_coding	putative homeodomain transcription factor 1
chr3	103893225	103895931	+	103893225	103894743	3pMXE	0.5	50	50	ENSMUST00000156262.8	ENSMUSG00000058388.15	Phtf1	chr3	protein_coding	putative homeodomain transcription factor 1
chr3	103923384	103924817	-	103923384;103924008	103923918;103924817	ES	0.5	50	50	ENSMUST00000064371.14	ENSMUSG00000052539.16	Magi3	chr3	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 3
chr3	103923384	103924817	-	103924008	103924817	3pMXE	0.5	50	50	ENSMUST00000122303.2	ENSMUSG00000052539.16	Magi3	chr3	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 3
chr3	104365280	104368717	-	104304005	104368717	A3SS	0.5	50	50	ENSMUST00000199180.2	ENSMUSG00000032913.14	Lrig2	chr3	protein_coding	leucine-rich repeats and immunoglobulin-like domains 2
chr3	104370124;104370867	104370806;104371175	-	104370124	104371175	cassetteExon	0.5	100	100	ENSMUST00000046316.11	ENSMUSG00000032913.14	Lrig2	chr3	protein_coding	leucine-rich repeats and immunoglobulin-like domains 2
chr3	104370103	104371175	-	104370124	104371175	A3SS	0.25	50	50	ENSMUST00000046316.11	ENSMUSG00000032913.14	Lrig2	chr3	protein_coding	leucine-rich repeats and immunoglobulin-like domains 2
chr3	104370161	104371175	-	104370124	104371175	A3SS	0.25	50	50	ENSMUST00000046316.11	ENSMUSG00000032913.14	Lrig2	chr3	protein_coding	leucine-rich repeats and immunoglobulin-like domains 2
chr3	104370161	104371175	-	104370103	104371175	A3SS	0.25	50	50	ENSMUST00000199070.5	ENSMUSG00000032913.14	Lrig2	chr3	protein_coding	leucine-rich repeats and immunoglobulin-like domains 2
chr3	104370867	104371175	-	104370103	104371175	A3SS	0.25	50	50	ENSMUST00000199070.5	ENSMUSG00000032913.14	Lrig2	chr3	protein_coding	leucine-rich repeats and immunoglobulin-like domains 2
chr3	104404870	104418772	-	104375964	104418772	A3SS	0.5	50	50	ENSMUST00000199070.5	ENSMUSG00000032913.14	Lrig2	chr3	protein_coding	leucine-rich repeats and immunoglobulin-like domains 2
chr3	104375964	104387098	-	104375964	104418772	A5SS	0.5	50	50	ENSMUST00000199070.5	ENSMUSG00000032913.14	Lrig2	chr3	protein_coding	leucine-rich repeats and immunoglobulin-like domains 2
chr3	104370867	104371175	-	104370161	104371175	A3SS	0.25	50	50	ENSMUST00000200453.5	ENSMUSG00000032913.14	Lrig2	chr3	protein_coding	leucine-rich repeats and immunoglobulin-like domains 2
chr3	104678061	104679496	-	104660687	104679496	A3SS	0.5	50	50	ENSMUST00000199762.2	ENSMUSG00000105195.2	Gm43584	chr3	lncRNA	predicted gene 43584
chr3	104700346	104701227	+	104700346	104701186	A3SS	0.5	50	50	ENSMUST00000196817.5	ENSMUSG00000002233.14	Rhoc	chr3	protein_coding	ras homolog family member C
chr3	104696399	104699205	+	104695738	104699205	A5SS	0.25	50	50	ENSMUST00000196817.5	ENSMUSG00000002233.14	Rhoc	chr3	protein_coding	ras homolog family member C
chr3	104696417	104699205	+	104695738	104699205	A5SS	0.25	50	50	ENSMUST00000196817.5	ENSMUSG00000002233.14	Rhoc	chr3	protein_coding	ras homolog family member C
chr3	104696698	104699205	+	104695738	104699205	A5SS	0.25	50	50	ENSMUST00000196817.5	ENSMUSG00000002233.14	Rhoc	chr3	protein_coding	ras homolog family member C
chr3	104696417	104699205	+	104696399	104699205	A5SS	0.25	50	50	ENSMUST00000002303.12	ENSMUSG00000002233.14	Rhoc	chr3	protein_coding	ras homolog family member C
chr3	104696698	104699205	+	104696399	104699205	A5SS	0.25	50	50	ENSMUST00000002303.12	ENSMUSG00000002233.14	Rhoc	chr3	protein_coding	ras homolog family member C
chr3	104696698	104699205	+	104696417	104699205	A5SS	0.25	50	50	ENSMUST00000106787.8	ENSMUSG00000002233.14	Rhoc	chr3	protein_coding	ras homolog family member C
chr3	104714418	104725252	-	104712423	104725252	A3SS	0.5	50	50	ENSMUST00000002297.12	ENSMUSG00000002227.16	Mov10	chr3	protein_coding	Mov10 RISC complex RNA helicase
chr3	104712423	104724585	-	104712423	104725252	A5SS	0.5	50	50	ENSMUST00000002297.12	ENSMUSG00000002227.16	Mov10	chr3	protein_coding	Mov10 RISC complex RNA helicase
chr3	104725472	104725673	-	104725472	104725574	5pMXE	0.5	50	50	ENSMUST00000168015.8	ENSMUSG00000002227.16	Mov10	chr3	protein_coding	Mov10 RISC complex RNA helicase
chr3	104725472	104725673	-	104725437	104725673	A3SS	0.5	50	50	ENSMUST00000106775.8	ENSMUSG00000002227.16	Mov10	chr3	protein_coding	Mov10 RISC complex RNA helicase
chr3	104742120	104748144	-	104742120;104747304	104747098;104748144	ES	0.5	50	50	ENSMUST00000094028.10	ENSMUSG00000070372.12	Capza1	chr3	protein_coding	capping protein (actin filament) muscle Z-line, alpha 1
chr3	104742120	104748144	-	104747304	104748144	3pMXE	0.5	50	50	ENSMUST00000196924.2	ENSMUSG00000070372.12	Capza1	chr3	protein_coding	capping protein (actin filament) muscle Z-line, alpha 1
chr3	104775422	104780838	+	104775422;104778327	104778162;104780838	ES	0.5	50	50	ENSMUST00000106769.8	ENSMUSG00000045576.17	St7l	chr3	protein_coding	suppression of tumorigenicity 7-like
chr3	104790187	104798780	+	104790187;104796756	104796602;104798780	ES	0.33	50	50	ENSMUST00000106769.8	ENSMUSG00000045576.17	St7l	chr3	protein_coding	suppression of tumorigenicity 7-like
chr3	104782258;104788279	104788240;104790109	+	104782258	104790109	cassetteExon	0.5	100	100	ENSMUST00000106769.8	ENSMUSG00000045576.17	St7l	chr3	protein_coding	suppression of tumorigenicity 7-like
chr3	104790187;104794956	104794922;104796602	+	104790187	104796602	cassetteExon	0.5	100	100	ENSMUST00000106769.8	ENSMUSG00000045576.17	St7l	chr3	protein_coding	suppression of tumorigenicity 7-like
chr3	104780892	104782204	+	104780892	104782143	A3SS	0.5	50	50	ENSMUST00000106769.8	ENSMUSG00000045576.17	St7l	chr3	protein_coding	suppression of tumorigenicity 7-like
chr3	104798877	104826667	+	104798877	104799513	A3SS&ES	0.5	50	50	ENSMUST00000106769.8	ENSMUSG00000045576.17	St7l	chr3	protein_coding	suppression of tumorigenicity 7-like
chr3	104803114	104826667	+	104803114	104826763	A3SS	0.5	50	50	ENSMUST00000106769.8	ENSMUSG00000045576.17	St7l	chr3	protein_coding	suppression of tumorigenicity 7-like
chr3	104772890	104775340	+	104772624	104775340	A5SS	0.5	50	50	ENSMUST00000106769.8	ENSMUSG00000045576.17	St7l	chr3	protein_coding	suppression of tumorigenicity 7-like
chr3	104782258;104790187	104790109;104798780	+	104782258	104798780	cassetteExon	0.5	100	100	ENSMUST00000200132.5	ENSMUSG00000045576.17	St7l	chr3	protein_coding	suppression of tumorigenicity 7-like
chr3	104782258	104788240	+	104782258	104798780	A3SS	0.33	50	50	ENSMUST00000200132.5	ENSMUSG00000045576.17	St7l	chr3	protein_coding	suppression of tumorigenicity 7-like
chr3	104796756	104798780	+	104782258	104798780	A5SS	0.33	50	50	ENSMUST00000200132.5	ENSMUSG00000045576.17	St7l	chr3	protein_coding	suppression of tumorigenicity 7-like
chr3	104790187	104798780	+	104790187	104796602	3pMXE	0.33	50	50	ENSMUST00000123876.6	ENSMUSG00000045576.17	St7l	chr3	protein_coding	suppression of tumorigenicity 7-like
chr3	104775422	104780838	+	104778327	104780838	5pMXE	0.5	50	50	ENSMUST00000197098.3	ENSMUSG00000045576.17	St7l	chr3	protein_coding	suppression of tumorigenicity 7-like
chr3	104803114	104826667	+	104798877	104826667	A5SS	0.5	50	50	ENSMUST00000197098.3	ENSMUSG00000045576.17	St7l	chr3	protein_coding	suppression of tumorigenicity 7-like
chr3	104782258	104798780	+	104790187	104798780	5pMXE	0.33	50	50	ENSMUST00000199335.2	ENSMUSG00000045576.17	St7l	chr3	protein_coding	suppression of tumorigenicity 7-like
chr3	104790187	104794922	+	104790187	104798780	A3SS	0.33	50	50	ENSMUST00000199335.2	ENSMUSG00000045576.17	St7l	chr3	protein_coding	suppression of tumorigenicity 7-like
chr3	104790187	104798780	+	104796756	104798780	5pMXE	0.33	50	50	ENSMUST00000140457.2	ENSMUSG00000045576.17	St7l	chr3	protein_coding	suppression of tumorigenicity 7-like
chr3	104940068	104946181	-	104940076	104946181	A3SS	0.5	50	50	ENSMUST00000077548.12	ENSMUSG00000062127.12	Cttnbp2nl	chr3	protein_coding	CTTNBP2 N-terminal like
chr3	104946303	104960216	-	104946303	104960301	A5SS	0.5	50	50	ENSMUST00000077548.12	ENSMUSG00000062127.12	Cttnbp2nl	chr3	protein_coding	CTTNBP2 N-terminal like
chr3	105355736	105358445	-	105349029	105358445	A3SS	0.5	50	50	ENSMUST00000143893.2	ENSMUSG00000074346.7	Kcnd3os	chr3	lncRNA	potassium voltage-gated channel, Shal-related family, member 3, opposite strand
chr3	105572862;105574334	105574278;105575396	+	105572862	105575396	cassetteExon	0.5	100	100	ENSMUST00000098761.10	ENSMUSG00000040896.17	Kcnd3	chr3	protein_coding	potassium voltage-gated channel, Shal-related family, member 3
chr3	105360773	105366055	+	105360033	105366055	A5SS	0.5	50	50	ENSMUST00000098761.10	ENSMUSG00000040896.17	Kcnd3	chr3	protein_coding	potassium voltage-gated channel, Shal-related family, member 3
chr3	105590846	105593955	-	105590846;105591769	105591601;105593955	ES	0.5	50	50	ENSMUST00000090680.11	ENSMUSG00000027905.16	Ddx20	chr3	protein_coding	DEAD box helicase 20
chr3	105590100	105590214	-	105590100	105590193	A5SS	0.5	50	50	ENSMUST00000090680.11	ENSMUSG00000027905.16	Ddx20	chr3	protein_coding	DEAD box helicase 20
chr3	105612853	105623685	+	105612141	105623685	A5SS	0.5	50	50	ENSMUST00000066610.8	ENSMUSG00000048458.9	Inka2	chr3	protein_coding	inka box actin regulator 2
chr3	105639387;105642495	105642381;105645071	-	105639387	105645071	cassetteExon	0.5	100	100	ENSMUST00000090678.11	ENSMUSG00000068798.11	Rap1a	chr3	protein_coding	RAS-related protein 1a
chr3	105657644;105701455	105701371;105708555	-	105657644	105708555	cassetteExon	0.5	100	100	ENSMUST00000090678.11	ENSMUSG00000068798.11	Rap1a	chr3	protein_coding	RAS-related protein 1a
chr3	105648718	105653220	-	105645214	105653220	A3SS	0.5	50	50	ENSMUST00000197094.5	ENSMUSG00000068798.11	Rap1a	chr3	protein_coding	RAS-related protein 1a
chr3	105645214	105646830	-	105645214	105653220	A5SS	0.5	50	50	ENSMUST00000197094.5	ENSMUSG00000068798.11	Rap1a	chr3	protein_coding	RAS-related protein 1a
chr3	105723289	105724298	+	105723289;105723759	105723560;105724298	ES	0.33	50	50	ENSMUST00000200182.5	ENSMUSG00000104835.5	Gm5547	chr3	lncRNA	predicted gene 5547
chr3	105724041	105724298	+	105723759	105724298	A5SS	0.33	50	50	ENSMUST00000200182.5	ENSMUSG00000104835.5	Gm5547	chr3	lncRNA	predicted gene 5547
chr3	105723289;105724041	105723560;105724298	+	105723289	105724298	cassetteExon	0.5	100	100	ENSMUST00000198306.2	ENSMUSG00000104835.5	Gm5547	chr3	lncRNA	predicted gene 5547
chr3	105723289	105724298	+	105724041	105724298	5pMXE	0.33	50	50	ENSMUST00000196002.2	ENSMUSG00000104835.5	Gm5547	chr3	lncRNA	predicted gene 5547
chr3	105778327	105821486	+	105778327	105814605	3pMXE	0.25	50	50	ENSMUST00000164730.2	ENSMUSG00000000562.6	Adora3	chr3	protein_coding	adenosine A3 receptor
chr3	105778327	105778914	+	105778327	105814605	A3SS	0.25	50	50	ENSMUST00000164730.2	ENSMUSG00000000562.6	Adora3	chr3	protein_coding	adenosine A3 receptor
chr3	105778327	105779535	+	105778327	105814605	A3SS	0.25	50	50	ENSMUST00000164730.2	ENSMUSG00000000562.6	Adora3	chr3	protein_coding	adenosine A3 receptor
chr3	105812468	105814605	+	105778327	105814605	A5SS	0.5	50	50	ENSMUST00000164730.2	ENSMUSG00000000562.6	Adora3	chr3	protein_coding	adenosine A3 receptor
chr3	105812468	105821486	+	105812468	105814605	3pMXE	0.5	50	50	ENSMUST00000000574.3	ENSMUSG00000000562.6	Adora3	chr3	protein_coding	adenosine A3 receptor
chr3	105778327	105821486	+	105778327	105779535	3pMXE	0.25	50	50	ENSMUST00000197907.2	ENSMUSG00000074344.8	Tmigd3	chr3	protein_coding	transmembrane and immunoglobulin domain containing 3
chr3	105778327	105778914	+	105778327	105779535	A3SS	0.25	50	50	ENSMUST00000197907.2	ENSMUSG00000074344.8	Tmigd3	chr3	protein_coding	transmembrane and immunoglobulin domain containing 3
chr3	105824414;105826108	105826042;105827291	+	105824414	105827291	cassetteExon	0.5	100	100	ENSMUST00000200482.5	ENSMUSG00000074344.8	Tmigd3	chr3	protein_coding	transmembrane and immunoglobulin domain containing 3
chr3	105778327	105778914	+	105778327	105821486	A3SS	0.25	50	50	ENSMUST00000200482.5	ENSMUSG00000074344.8	Tmigd3	chr3	protein_coding	transmembrane and immunoglobulin domain containing 3
chr3	105829303	105831235	+	105829303	105831238	A3SS	0.5	50	50	ENSMUST00000200482.5	ENSMUSG00000074344.8	Tmigd3	chr3	protein_coding	transmembrane and immunoglobulin domain containing 3
chr3	105812468	105821486	+	105778327	105821486	A5SS	0.5	50	50	ENSMUST00000200482.5	ENSMUSG00000074344.8	Tmigd3	chr3	protein_coding	transmembrane and immunoglobulin domain containing 3
chr3	105824414	105827291	+	105824414	105826042	3pMXE	0.5	50	50	ENSMUST00000196748.2	ENSMUSG00000118531.2	Gm53046	chr3	protein_coding	predicted gene, 53046
chr3	105834557;105835112	105835015;105835281	-	105834557	105835281	cassetteExon	0.5	100	100	ENSMUST00000098758.5	ENSMUSG00000074342.5	I830077J02Rik	chr3	protein_coding	RIKEN cDNA I830077J02 gene
chr3	105850379	105858907	-	105850379;105851182	105851003;105858907	ES	0.5	50	50	ENSMUST00000118209.8	ENSMUSG00000000563.18	Atp5pb	chr3	protein_coding	ATP synthase peripheral stalk-membrane subunit b
chr3	105863357;105865352	105865186;105866178	-	105863357	105866178	cassetteExon	0.5	100	100	ENSMUST00000118209.8	ENSMUSG00000000563.18	Atp5pb	chr3	protein_coding	ATP synthase peripheral stalk-membrane subunit b
chr3	105867003	105867269	+	105867014	105867269	A5SS	0.5	50	50	ENSMUST00000010278.12	ENSMUSG00000000561.15	Wdr77	chr3	protein_coding	WD repeat domain 77
chr3	105873172	105873673	+	105873189	105873673	A5SS	0.5	50	50	ENSMUST00000010278.12	ENSMUSG00000000561.15	Wdr77	chr3	protein_coding	WD repeat domain 77
chr3	105888665	105892369	+	105888665	105891889	3pMXE	0.5	50	50	ENSMUST00000167642.8	ENSMUSG00000105852.5	Gm42890	chr3	lncRNA	predicted gene 42890
chr3	105881156	105881729	+	105874675	105881729	A5SS	0.5	50	50	ENSMUST00000167642.8	ENSMUSG00000105852.5	Gm42890	chr3	lncRNA	predicted gene 42890
chr3	105885714;105887593	105887214;105888549	+	105885714	105888549	cassetteExon	0.5	100	100	ENSMUST00000163626.2	ENSMUSG00000074340.10	Ovgp1	chr3	protein_coding	oviductal glycoprotein 1
chr3	105885714	105888549	+	105887593	105888549	5pMXE	0.5	50	50	ENSMUST00000092878.5	ENSMUSG00000074340.10	Ovgp1	chr3	protein_coding	oviductal glycoprotein 1
chr3	105908559	105908643	-	105908559	105921744	A5SS	0.5	50	50	ENSMUST00000010280.11	ENSMUSG00000010136.15	Pifo	chr3	protein_coding	primary cilia formation
chr3	105926638;105927028	105926905;105931383	-	105926638	105931383	cassetteExon	0.5	100	100	ENSMUST00000066537.10	ENSMUSG00000043873.12	Chil5	chr3	protein_coding	chitinase-like 5
chr3	105926638;105927329	105926905;105931383	-	105926638	105931383	cassetteExon	0.5	100	100	ENSMUST00000066537.10	ENSMUSG00000043873.12	Chil5	chr3	protein_coding	chitinase-like 5
chr3	105927028;105927329	105927205;105931383	-	105927028	105931383	cassetteExon	0.5	100	100	ENSMUST00000054973.8	ENSMUSG00000043873.12	Chil5	chr3	protein_coding	chitinase-like 5
chr3	106021990;106022395	106022350;106022483	+	106021990	106022483	cassetteExon	0.5	100	100	ENSMUST00000079132.12	ENSMUSG00000062778.13	Chia1	chr3	protein_coding	chitinase, acidic 1
chr3	106056036	106057028	-	106056036;106056237	106056118;106057028	ES	0.5	50	50	ENSMUST00000063062.9	ENSMUSG00000040809.11	Chil3	chr3	protein_coding	chitinase-like 3
chr3	106395279	106395845	+	106395279	106395888	A3SS	0.5	50	50	ENSMUST00000139062.8	ENSMUSG00000027901.13	Dennd2d	chr3	protein_coding	DENN/MADD domain containing 2D
chr3	106390029	106394189	+	106389837	106394189	A5SS	0.25	50	50	ENSMUST00000139062.8	ENSMUSG00000027901.13	Dennd2d	chr3	protein_coding	DENN/MADD domain containing 2D
chr3	106390478	106394189	+	106389837	106394189	A5SS	0.25	50	50	ENSMUST00000139062.8	ENSMUSG00000027901.13	Dennd2d	chr3	protein_coding	DENN/MADD domain containing 2D
chr3	106393636	106394189	+	106389837	106394189	A5SS	0.25	50	50	ENSMUST00000139062.8	ENSMUSG00000027901.13	Dennd2d	chr3	protein_coding	DENN/MADD domain containing 2D
chr3	106390029;106390478	106390381;106394189	+	106390029	106394189	cassetteExon	0.5	100	100	ENSMUST00000029508.11	ENSMUSG00000027901.13	Dennd2d	chr3	protein_coding	DENN/MADD domain containing 2D
chr3	106393636	106394189	+	106390029	106394189	A5SS	0.25	50	50	ENSMUST00000029508.11	ENSMUSG00000027901.13	Dennd2d	chr3	protein_coding	DENN/MADD domain containing 2D
chr3	106393636	106394189	+	106390478	106394189	A5SS	0.25	50	50	ENSMUST00000149225.2	ENSMUSG00000027901.13	Dennd2d	chr3	protein_coding	DENN/MADD domain containing 2D
chr3	106413168;106427395	106427325;106440671	-	106413168;106438594	106420119;106440671	MXE	0.5	100	100	ENSMUST00000068301.11	ENSMUSG00000040774.16	Cept1	chr3	protein_coding	choline/ethanolaminephosphotransferase 1
chr3	106413168;106427409	106427325;106438453	-	106413168;106420203	106420119;106438453	MXE	0.5	100	100	ENSMUST00000068301.11	ENSMUSG00000040774.16	Cept1	chr3	protein_coding	choline/ethanolaminephosphotransferase 1
chr3	106420186	106440671	-	106438594	106440671	A3SS&ES	0.33	50	50	ENSMUST00000068301.11	ENSMUSG00000040774.16	Cept1	chr3	protein_coding	choline/ethanolaminephosphotransferase 1
chr3	106440818	106446759	-	106440818	106446506	A5SS	0.5	50	50	ENSMUST00000068301.11	ENSMUSG00000040774.16	Cept1	chr3	protein_coding	choline/ethanolaminephosphotransferase 1
chr3	106446919	106454692	-	106446919	106454996	A5SS	0.5	50	50	ENSMUST00000068301.11	ENSMUSG00000040774.16	Cept1	chr3	protein_coding	choline/ethanolaminephosphotransferase 1
chr3	106413168;106420186	106420119;106440671	-	106413168;106438594	106427325;106440671	MXE	0.5	100	100	ENSMUST00000039153.14	ENSMUSG00000040774.16	Cept1	chr3	protein_coding	choline/ethanolaminephosphotransferase 1
chr3	106427395	106440671	-	106438594	106440671	A3SS&ES	0.33	50	50	ENSMUST00000039153.14	ENSMUSG00000040774.16	Cept1	chr3	protein_coding	choline/ethanolaminephosphotransferase 1
chr3	106413168;106427395	106427325;106440671	-	106413168;106420186	106420119;106440671	MXE	0.5	100	100	ENSMUST00000192438.6	ENSMUSG00000040774.16	Cept1	chr3	protein_coding	choline/ethanolaminephosphotransferase 1
chr3	106420186	106440671	-	106427395	106440671	3pMXE	0.33	50	50	ENSMUST00000148269.2	ENSMUSG00000040774.16	Cept1	chr3	protein_coding	choline/ethanolaminephosphotransferase 1
chr3	106455236	106462480	+	106455236;106459596	106459472;106462480	ES	0.5	50	50	ENSMUST00000067630.13	ENSMUSG00000027900.16	Dram2	chr3	protein_coding	DNA-damage regulated autophagy modulator 2
chr3	106455236;106456301	106456222;106459472	+	106455236	106459472	cassetteExon	0.5	100	100	ENSMUST00000067630.13	ENSMUSG00000027900.16	Dram2	chr3	protein_coding	DNA-damage regulated autophagy modulator 2
chr3	106455236;106457991	106457815;106459472	+	106455236	106459472	cassetteExon	0.5	100	100	ENSMUST00000067630.13	ENSMUSG00000027900.16	Dram2	chr3	protein_coding	DNA-damage regulated autophagy modulator 2
chr3	106459596	106462483	+	106459596	106462480	A3SS	0.5	50	50	ENSMUST00000067630.13	ENSMUSG00000027900.16	Dram2	chr3	protein_coding	DNA-damage regulated autophagy modulator 2
chr3	106455236;106457991	106457815;106462483	+	106455236;106459596	106459472;106462483	MXE	0.5	100	100	ENSMUST00000129053.8	ENSMUSG00000027900.16	Dram2	chr3	protein_coding	DNA-damage regulated autophagy modulator 2
chr3	106455236	106462480	+	106455236	106459472	A3SS&ES	0.25	50	50	ENSMUST00000129053.8	ENSMUSG00000027900.16	Dram2	chr3	protein_coding	DNA-damage regulated autophagy modulator 2
chr3	106457991;106459596	106459472;106462483	+	106457991	106462483	cassetteExon	0.5	100	100	ENSMUST00000134396.8	ENSMUSG00000027900.16	Dram2	chr3	protein_coding	DNA-damage regulated autophagy modulator 2
chr3	106455236	106456222	+	106455236	106457815	A3SS	0.25	50	50	ENSMUST00000134396.8	ENSMUSG00000027900.16	Dram2	chr3	protein_coding	DNA-damage regulated autophagy modulator 2
chr3	106455236	106462480	+	106455236	106457815	A3SS&ES	0.25	50	50	ENSMUST00000134396.8	ENSMUSG00000027900.16	Dram2	chr3	protein_coding	DNA-damage regulated autophagy modulator 2
chr3	106455236	106456222	+	106455236	106462480	A3SS	0.25	50	50	ENSMUST00000121034.8	ENSMUSG00000027900.16	Dram2	chr3	protein_coding	DNA-damage regulated autophagy modulator 2
chr3	106473500	106478009	+	106473500	106480289	A3SS	0.5	50	50	ENSMUST00000029507.13	ENSMUSG00000027900.16	Dram2	chr3	protein_coding	DNA-damage regulated autophagy modulator 2
chr3	106479009	106480289	+	106473500	106480289	A5SS	0.5	50	50	ENSMUST00000029507.13	ENSMUSG00000027900.16	Dram2	chr3	protein_coding	DNA-damage regulated autophagy modulator 2
chr3	106455236;106456301	106456222;106459472	+	106455236;106457991	106457815;106459472	MXE	0.5	100	100	ENSMUST00000144746.8	ENSMUSG00000027900.16	Dram2	chr3	protein_coding	DNA-damage regulated autophagy modulator 2
chr3	106457991	106462483	+	106457991	106459472	A3SS&ES	0.5	50	50	ENSMUST00000132923.8	ENSMUSG00000027900.16	Dram2	chr3	protein_coding	DNA-damage regulated autophagy modulator 2
chr3	106592449	106638979	+	106592449	106641674	A3SS	0.5	50	50	ENSMUST00000098751.10	ENSMUSG00000056260.16	Lrif1	chr3	protein_coding	ligand dependent nuclear receptor interacting factor 1
chr3	106629422	106641674	+	106592449	106641674	A5SS	0.25	50	50	ENSMUST00000098751.10	ENSMUSG00000056260.16	Lrif1	chr3	protein_coding	ligand dependent nuclear receptor interacting factor 1
chr3	106640458	106641674	+	106592449	106641674	A5SS	0.25	50	50	ENSMUST00000098751.10	ENSMUSG00000056260.16	Lrif1	chr3	protein_coding	ligand dependent nuclear receptor interacting factor 1
chr3	106640922	106641674	+	106592449	106641674	A5SS	0.25	50	50	ENSMUST00000098751.10	ENSMUSG00000056260.16	Lrif1	chr3	protein_coding	ligand dependent nuclear receptor interacting factor 1
chr3	106629168	106638979	+	106592449	106638979	A5SS	0.33	50	50	ENSMUST00000156544.2	ENSMUSG00000056260.16	Lrif1	chr3	protein_coding	ligand dependent nuclear receptor interacting factor 1
chr3	106629422	106638979	+	106592449	106638979	A5SS	0.33	50	50	ENSMUST00000156544.2	ENSMUSG00000056260.16	Lrif1	chr3	protein_coding	ligand dependent nuclear receptor interacting factor 1
chr3	106629422	106638979	+	106629168	106638979	A5SS	0.33	50	50	ENSMUST00000130105.2	ENSMUSG00000056260.16	Lrif1	chr3	protein_coding	ligand dependent nuclear receptor interacting factor 1
chr3	106640458	106641674	+	106640458;106640922	106640653;106641674	ES	0.33	50	50	ENSMUST00000127003.8	ENSMUSG00000056260.16	Lrif1	chr3	protein_coding	ligand dependent nuclear receptor interacting factor 1
chr3	106629422	106630173	+	106629422	106638979	A3SS	0.25	50	50	ENSMUST00000127003.8	ENSMUSG00000056260.16	Lrif1	chr3	protein_coding	ligand dependent nuclear receptor interacting factor 1
chr3	106629422	106638987	+	106629422	106638979	A3SS	0.25	50	50	ENSMUST00000127003.8	ENSMUSG00000056260.16	Lrif1	chr3	protein_coding	ligand dependent nuclear receptor interacting factor 1
chr3	106629422	106630173	+	106629422	106641674	A3SS	0.25	50	50	ENSMUST00000106736.3	ENSMUSG00000056260.16	Lrif1	chr3	protein_coding	ligand dependent nuclear receptor interacting factor 1
chr3	106629422	106638979	+	106629422	106641674	A3SS	0.25	50	50	ENSMUST00000106736.3	ENSMUSG00000056260.16	Lrif1	chr3	protein_coding	ligand dependent nuclear receptor interacting factor 1
chr3	106629422	106638987	+	106629422	106641674	A3SS	0.25	50	50	ENSMUST00000106736.3	ENSMUSG00000056260.16	Lrif1	chr3	protein_coding	ligand dependent nuclear receptor interacting factor 1
chr3	106640458	106641674	+	106629422	106641674	A5SS	0.25	50	50	ENSMUST00000106736.3	ENSMUSG00000056260.16	Lrif1	chr3	protein_coding	ligand dependent nuclear receptor interacting factor 1
chr3	106640922	106641674	+	106629422	106641674	A5SS	0.25	50	50	ENSMUST00000106736.3	ENSMUSG00000056260.16	Lrif1	chr3	protein_coding	ligand dependent nuclear receptor interacting factor 1
chr3	106629422;106630285	106630173;106638987	+	106629422	106638987	cassetteExon	0.5	100	100	ENSMUST00000154973.2	ENSMUSG00000056260.16	Lrif1	chr3	protein_coding	ligand dependent nuclear receptor interacting factor 1
chr3	106640458	106641674	+	106640458	106640653	3pMXE	0.5	50	50	ENSMUST00000106737.4	ENSMUSG00000056260.16	Lrif1	chr3	protein_coding	ligand dependent nuclear receptor interacting factor 1
chr3	106629422	106641674	+	106629422;106640458	106638979;106641674	ES	0.33	50	50	ENSMUST00000098750.5	ENSMUSG00000056260.16	Lrif1	chr3	protein_coding	ligand dependent nuclear receptor interacting factor 1
chr3	106729883	106732164	-	106729883	106732198	A5SS	0.5	50	50	ENSMUST00000213616.3	ENSMUSG00000043529.5	Olfr266	chr3	protein_coding	olfactory receptor 266
chr3	106856838;106950469	106950387;106962798	-	106856838	106962798	cassetteExon	0.5	100	100	ENSMUST00000182400.8	ENSMUSG00000098108.8	Gm27008	chr3	lncRNA	predicted gene, 27008
chr3	106962902	106998926	-	106962902	106999055	A5SS	0.5	50	50	ENSMUST00000182400.8	ENSMUSG00000098108.8	Gm27008	chr3	lncRNA	predicted gene, 27008
chr3	106998230	107004367	+	106998356	107004367	A5SS	0.5	50	50	ENSMUST00000060946.4	ENSMUSG00000050179.4	A930002I21Rik	chr3	lncRNA	RIKEN cDNA A930002I21 gene
chr3	107009075	107010500	+	107008710	107010500	A5SS	0.33	50	50	ENSMUST00000197470.5	ENSMUSG00000040724.6	Kcna2	chr3	protein_coding	potassium voltage-gated channel, shaker-related subfamily, member 2
chr3	107010072	107010500	+	107008710	107010500	A5SS	0.33	50	50	ENSMUST00000197470.5	ENSMUSG00000040724.6	Kcna2	chr3	protein_coding	potassium voltage-gated channel, shaker-related subfamily, member 2
chr3	107010072	107010500	+	107009075	107010500	A5SS	0.33	50	50	ENSMUST00000038695.6	ENSMUSG00000040724.6	Kcna2	chr3	protein_coding	potassium voltage-gated channel, shaker-related subfamily, member 2
chr3	107090561	107094438	+	107090561	107101315	A3SS	0.5	50	50	ENSMUST00000055064.8	ENSMUSG00000042861.8	Kcna10	chr3	protein_coding	potassium voltage-gated channel, shaker-related subfamily, member 10
chr3	107144529	107146894	-	107144529	107145924	5pMXE	0.5	50	50	ENSMUST00000197758.5	ENSMUSG00000070368.10	Prok1	chr3	protein_coding	prokineticin 1
chr3	107211820	107213358	+	107211820	107218752	A3SS	0.5	50	50	ENSMUST00000029502.14	ENSMUSG00000027896.16	Slc16a4	chr3	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 4
chr3	107350793	107352746	-	107346792	107352746	A3SS	0.5	50	50	ENSMUST00000009617.10	ENSMUSG00000027895.11	Kcnc4	chr3	protein_coding	potassium voltage gated channel, Shaw-related subfamily, member 4
chr3	107403139	107424922	-	107403139;107408056	107407684;107424922	ES	0.5	50	50	ENSMUST00000169449.8	ENSMUSG00000027894.15	Slc6a17	chr3	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 17
chr3	107381771	107384044	-	107381780	107384044	A3SS	0.5	50	50	ENSMUST00000169449.8	ENSMUSG00000027894.15	Slc6a17	chr3	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 17
chr3	107391350	107398736	-	107384734	107398736	A3SS	0.33	50	50	ENSMUST00000169449.8	ENSMUSG00000027894.15	Slc6a17	chr3	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 17
chr3	107397326	107398736	-	107384734	107398736	A3SS	0.33	50	50	ENSMUST00000169449.8	ENSMUSG00000027894.15	Slc6a17	chr3	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 17
chr3	107408056	107424323	-	107408056	107424922	A5SS	0.33	50	50	ENSMUST00000169449.8	ENSMUSG00000027894.15	Slc6a17	chr3	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 17
chr3	107408056	107424577	-	107408056	107424922	A5SS	0.33	50	50	ENSMUST00000169449.8	ENSMUSG00000027894.15	Slc6a17	chr3	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 17
chr3	107403139	107424922	-	107403139	107407684	5pMXE	0.5	50	50	ENSMUST00000168211.2	ENSMUSG00000027894.15	Slc6a17	chr3	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 17
chr3	107397326	107398736	-	107391350	107398736	A3SS	0.33	50	50	ENSMUST00000170429.8	ENSMUSG00000027894.15	Slc6a17	chr3	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 17
chr3	107408056	107424323	-	107408056	107424577	A5SS	0.33	50	50	ENSMUST00000166892.2	ENSMUSG00000027894.15	Slc6a17	chr3	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 17
chr3	107526298	107527525	-	107526298;107527419	107527356;107527525	ES	0.5	50	50	ENSMUST00000064759.7	ENSMUSG00000014601.14	Strip1	chr3	protein_coding	striatin interacting protein 1
chr3	107520782	107521951	-	107520782	107521911	A5SS	0.5	50	50	ENSMUST00000064759.7	ENSMUSG00000014601.14	Strip1	chr3	protein_coding	striatin interacting protein 1
chr3	107524254	107525306	-	107524254	107525374	A5SS	0.5	50	50	ENSMUST00000064759.7	ENSMUSG00000014601.14	Strip1	chr3	protein_coding	striatin interacting protein 1
chr3	107526298	107527525	-	107526298	107527356	5pMXE	0.5	50	50	ENSMUST00000197192.2	ENSMUSG00000014601.14	Strip1	chr3	protein_coding	striatin interacting protein 1
chr3	107577636;107578560	107578454;107579358	-	107577636	107579358	cassetteExon	0.5	100	100	ENSMUST00000138091.8	ENSMUSG00000027893.15	Ahcyl1	chr3	protein_coding	S-adenosylhomocysteine hydrolase-like 1
chr3	107585147	107603101	-	107585147	107603474	A5SS	0.5	50	50	ENSMUST00000029490.15	ENSMUSG00000027893.15	Ahcyl1	chr3	protein_coding	S-adenosylhomocysteine hydrolase-like 1
chr3	107577636	107579358	-	107578560	107579358	3pMXE	0.5	50	50	ENSMUST00000153623.2	ENSMUSG00000027893.15	Ahcyl1	chr3	protein_coding	S-adenosylhomocysteine hydrolase-like 1
chr3	107664055;107664444	107664305;107667341	-	107664055	107667341	cassetteExon	0.5	100	100	ENSMUST00000118593.8	ENSMUSG00000014599.11	Csf1	chr3	protein_coding	colony stimulating factor 1 (macrophage)
chr3	107653156	107654042	-	107650461	107654042	A3SS	0.5	50	50	ENSMUST00000118593.8	ENSMUSG00000014599.11	Csf1	chr3	protein_coding	colony stimulating factor 1 (macrophage)
chr3	107656485	107657627	-	107655600	107657627	A3SS	0.5	50	50	ENSMUST00000118593.8	ENSMUSG00000014599.11	Csf1	chr3	protein_coding	colony stimulating factor 1 (macrophage)
chr3	107657774	107657998	-	107657774	107661048	A5SS	0.5	50	50	ENSMUST00000118593.8	ENSMUSG00000014599.11	Csf1	chr3	protein_coding	colony stimulating factor 1 (macrophage)
chr3	107786717	107788411	+	107786717;107786921	107786857;107788411	ES	0.33	50	50	ENSMUST00000037375.10	ENSMUSG00000040600.10	Eps8l3	chr3	protein_coding	EPS8-like 3
chr3	107784682	107788411	+	107784682;107786717	107786663;107788411	ES	0.33	50	50	ENSMUST00000200198.2	ENSMUSG00000040600.10	Eps8l3	chr3	protein_coding	EPS8-like 3
chr3	107784682;107786921	107786663;107788411	+	107784682	107788411	cassetteExon	0.5	100	100	ENSMUST00000199990.2	ENSMUSG00000040600.10	Eps8l3	chr3	protein_coding	EPS8-like 3
chr3	107800823	107802959	-	107800823;107801544	107801367;107802959	ES	0.2	50	50	ENSMUST00000131345.8	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107801544;107801972	107801905;107802959	-	107801544	107802959	cassetteExon	0.5	100	100	ENSMUST00000131345.8	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107801544;107802308	107801905;107802959	-	107801544	107802959	cassetteExon	0.5	100	100	ENSMUST00000131345.8	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107801544;107802308	107802177;107802959	-	107801544	107802959	cassetteExon	0.5	100	100	ENSMUST00000131345.8	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107801531	107802959	-	107801544	107802959	A3SS	0.2	50	50	ENSMUST00000131345.8	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107801544;107802308	107802177;107802959	-	107801544;107801972	107801905;107802959	MXE	0.5	100	100	ENSMUST00000144591.8	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107801972;107802308	107802177;107802959	-	107801972	107802959	cassetteExon	0.5	100	100	ENSMUST00000144591.8	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107801531	107801905	-	107801544	107801905	A3SS	0.5	50	50	ENSMUST00000144591.8	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107801531	107802959	-	107801972	107802959	A3SS&ES	0.2	50	50	ENSMUST00000144591.8	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107800823	107802959	-	107800823;107801531	107801367;107802959	ES	0.2	50	50	ENSMUST00000152663.8	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107801531;107801972	107801905;107802959	-	107801531	107802959	cassetteExon	0.5	100	100	ENSMUST00000152663.8	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107801531;107802308	107801905;107802959	-	107801531	107802959	cassetteExon	0.5	100	100	ENSMUST00000152663.8	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107801531;107802308	107802177;107802959	-	107801531	107802959	cassetteExon	0.5	100	100	ENSMUST00000152663.8	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107800823	107802959	-	107800823;107802308	107801367;107802959	ES	0.2	50	50	ENSMUST00000146337.3	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107801531	107802959	-	107802308	107802959	A3SS	0.2	50	50	ENSMUST00000146337.3	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107801544	107802959	-	107802308	107802959	A3SS	0.2	50	50	ENSMUST00000146337.3	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107801972	107802959	-	107802308	107802959	A3SS	0.2	50	50	ENSMUST00000146337.3	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107802308	107803002	-	107802308	107802959	A5SS	0.5	50	50	ENSMUST00000146337.3	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107800823	107802959	-	107800823	107801367	A5SS&ES	0.5	50	50	ENSMUST00000133570.8	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107801544	107802177	-	107801544	107801905	A5SS	0.33	50	50	ENSMUST00000133570.8	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107801544	107802959	-	107801544	107801905	A5SS	0.33	50	50	ENSMUST00000133570.8	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107801544;107801972	107801905;107802177	-	107801544	107802177	cassetteExon	0.5	100	100	ENSMUST00000137800.8	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107801524	107802177	-	107801544	107802177	A3SS	0.25	50	50	ENSMUST00000137800.8	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107801531	107802177	-	107801544	107802177	A3SS	0.25	50	50	ENSMUST00000137800.8	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107801524	107802177	-	107801972	107802177	A3SS&ES	0.25	50	50	ENSMUST00000137970.8	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107801531	107802177	-	107801972	107802177	A3SS&ES	0.25	50	50	ENSMUST00000137970.8	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107801972	107802959	-	107800823	107802959	A3SS	0.2	50	50	ENSMUST00000145191.2	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107802308	107802959	-	107800823	107802959	A3SS	0.2	50	50	ENSMUST00000145191.2	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107801544	107802959	-	107801544	107802177	A5SS&ES	0.33	50	50	ENSMUST00000163675.8	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107801531	107802177	-	107801524	107802177	A3SS	0.25	50	50	ENSMUST00000138472.9	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107801531;107802308	107802177;107802959	-	107801531;107801972	107801905;107802959	MXE	0.5	100	100	ENSMUST00000135512.3	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107801544	107802959	-	107801972	107802959	A3SS&ES	0.2	50	50	ENSMUST00000135512.3	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107801531;107801972	107801905;107802177	-	107801531	107802177	cassetteExon	0.5	100	100	ENSMUST00000154329.3	ENSMUSG00000086968.9	4933431E20Rik	chr3	lncRNA	RIKEN cDNA 4933431E20 gene
chr3	107803314	107803942	+	107803314;107803689	107803614;107803942	ES	0.33	50	50	ENSMUST00000004134.11	ENSMUSG00000004032.11	Gstm5	chr3	protein_coding	glutathione S-transferase, mu 5
chr3	107804006	107804554	+	107804006	107804604	A3SS	0.5	50	50	ENSMUST00000004134.11	ENSMUSG00000004032.11	Gstm5	chr3	protein_coding	glutathione S-transferase, mu 5
chr3	107803852	107803942	+	107803689	107803942	A5SS	0.33	50	50	ENSMUST00000004134.11	ENSMUSG00000004032.11	Gstm5	chr3	protein_coding	glutathione S-transferase, mu 5
chr3	107803314	107803942	+	107803314;107803852	107803614;107803942	ES	0.33	50	50	ENSMUST00000170058.8	ENSMUSG00000004032.11	Gstm5	chr3	protein_coding	glutathione S-transferase, mu 5
chr3	107803314	107803942	+	107803689	107803942	5pMXE	0.33	50	50	ENSMUST00000169365.2	ENSMUSG00000004032.11	Gstm5	chr3	protein_coding	glutathione S-transferase, mu 5
chr3	107834296	107836379	-	107834296;107836296	107836186;107836379	ES	0.5	50	50	ENSMUST00000004137.11	ENSMUSG00000004035.13	Gstm7	chr3	protein_coding	glutathione S-transferase, mu 7
chr3	107838706	107838850	-	107838706	107838935	A5SS	0.33	50	50	ENSMUST00000004137.11	ENSMUSG00000004035.13	Gstm7	chr3	protein_coding	glutathione S-transferase, mu 7
chr3	107838706	107838868	-	107838706	107838935	A5SS	0.33	50	50	ENSMUST00000004137.11	ENSMUSG00000004035.13	Gstm7	chr3	protein_coding	glutathione S-transferase, mu 7
chr3	107838706	107838868	-	107838706	107838850	A5SS	0.33	50	50	ENSMUST00000106688.8	ENSMUSG00000004035.13	Gstm7	chr3	protein_coding	glutathione S-transferase, mu 7
chr3	107848600	107849649	-	107848600;107849549	107849449;107849649	ES	0.5	50	50	ENSMUST00000106685.9	ENSMUSG00000068762.12	Gstm6	chr3	protein_coding	glutathione S-transferase, mu 6
chr3	107848642	107849449	-	107848600	107849449	A3SS	0.5	50	50	ENSMUST00000106685.9	ENSMUSG00000068762.12	Gstm6	chr3	protein_coding	glutathione S-transferase, mu 6
chr3	107848600	107849649	-	107849549	107849649	A3SS&ES	0.5	50	50	ENSMUST00000106684.8	ENSMUSG00000068762.12	Gstm6	chr3	protein_coding	glutathione S-transferase, mu 6
chr3	107848600	107850018	-	107849730	107850018	A3SS&ES	0.5	50	50	ENSMUST00000106684.8	ENSMUSG00000068762.12	Gstm6	chr3	protein_coding	glutathione S-transferase, mu 6
chr3	107848600;107849730	107849449;107850018	-	107848600	107850018	cassetteExon	0.5	100	100	ENSMUST00000106683.8	ENSMUSG00000068762.12	Gstm6	chr3	protein_coding	glutathione S-transferase, mu 6
chr3	107848600;107849730	107849649;107850018	-	107848600	107850018	cassetteExon	0.5	100	100	ENSMUST00000106683.8	ENSMUSG00000068762.12	Gstm6	chr3	protein_coding	glutathione S-transferase, mu 6
chr3	107893425	107893546	-	107893425	107893674	A5SS	0.5	50	50	ENSMUST00000012348.9	ENSMUSG00000040562.13	Gstm2	chr3	protein_coding	glutathione S-transferase, mu 2
chr3	107922434	107923644	-	107922356	107923644	A3SS	0.33	50	50	ENSMUST00000004140.11	ENSMUSG00000058135.13	Gstm1	chr3	protein_coding	glutathione S-transferase, mu 1
chr3	107922461	107923644	-	107922356	107923644	A3SS	0.33	50	50	ENSMUST00000004140.11	ENSMUSG00000058135.13	Gstm1	chr3	protein_coding	glutathione S-transferase, mu 1
chr3	107920094	107920554	-	107920094	107922069	A5SS	0.5	50	50	ENSMUST00000004140.11	ENSMUSG00000058135.13	Gstm1	chr3	protein_coding	glutathione S-transferase, mu 1
chr3	107922434	107923644	-	107922461	107923644	A3SS	0.33	50	50	ENSMUST00000153314.8	ENSMUSG00000058135.13	Gstm1	chr3	protein_coding	glutathione S-transferase, mu 1
chr3	107951744	107952126	-	107951744	107951953	A5SS	0.33	50	50	ENSMUST00000029489.15	ENSMUSG00000027890.18	Gstm4	chr3	protein_coding	glutathione S-transferase, mu 4
chr3	107951744	107952161	-	107951744	107951953	A5SS	0.33	50	50	ENSMUST00000029489.15	ENSMUSG00000027890.18	Gstm4	chr3	protein_coding	glutathione S-transferase, mu 4
chr3	107951744	107952126	-	107951744	107952161	A5SS	0.33	50	50	ENSMUST00000178808.8	ENSMUSG00000027890.18	Gstm4	chr3	protein_coding	glutathione S-transferase, mu 4
chr3	107988447	107993534	-	107988447	107992563	5pMXE	0.5	50	50	ENSMUST00000136712.8	ENSMUSG00000027889.18	Ampd2	chr3	protein_coding	adenosine monophosphate deaminase 2
chr3	108000389	108000510	+	108000409	108000510	A5SS	0.5	50	50	ENSMUST00000058669.15	ENSMUSG00000009108.16	Gnat2	chr3	protein_coding	guanine nucleotide binding protein, alpha transducing 2
chr3	108001819	108002457	+	108000682	108002457	A5SS	0.5	50	50	ENSMUST00000058669.15	ENSMUSG00000009108.16	Gnat2	chr3	protein_coding	guanine nucleotide binding protein, alpha transducing 2
chr3	108004618	108005283	+	108003823	108005283	A5SS	0.5	50	50	ENSMUST00000058669.15	ENSMUSG00000009108.16	Gnat2	chr3	protein_coding	guanine nucleotide binding protein, alpha transducing 2
chr3	108093994	108094442	+	108093994	108094407	A3SS	0.5	50	50	ENSMUST00000050909.7	ENSMUSG00000050947.10	Amigo1	chr3	protein_coding	adhesion molecule with Ig like domain 1
chr3	108095907	108098990	+	108095368	108098990	A5SS	0.33	50	50	ENSMUST00000106659.3	ENSMUSG00000050947.10	Amigo1	chr3	protein_coding	adhesion molecule with Ig like domain 1
chr3	108096019	108098990	+	108095368	108098990	A5SS	0.33	50	50	ENSMUST00000106659.3	ENSMUSG00000050947.10	Amigo1	chr3	protein_coding	adhesion molecule with Ig like domain 1
chr3	108096019	108098990	+	108095907	108098990	A5SS	0.33	50	50	ENSMUST00000106661.4	ENSMUSG00000050947.10	Amigo1	chr3	protein_coding	adhesion molecule with Ig like domain 1
chr3	108107586	108107943	-	108107478	108107943	A3SS	0.5	50	50	ENSMUST00000106655.2	ENSMUSG00000048796.8	Cyb561d1	chr3	protein_coding	cytochrome b-561 domain containing 1
chr3	108107478	108108076	-	108107478	108107943	A5SS	0.5	50	50	ENSMUST00000106655.2	ENSMUSG00000048796.8	Cyb561d1	chr3	protein_coding	cytochrome b-561 domain containing 1
chr3	108114920	108115756	-	108114920;108115383	108115279;108115756	ES	0.5	50	50	ENSMUST00000117409.8	ENSMUSG00000048997.18	Atxn7l2	chr3	protein_coding	ataxin 7-like 2
chr3	108115821;108116411	108116233;108117661	-	108115821	108117661	cassetteExon	0.5	100	100	ENSMUST00000117409.8	ENSMUSG00000048997.18	Atxn7l2	chr3	protein_coding	ataxin 7-like 2
chr3	108114425	108114710	-	108114329	108114710	A3SS	0.5	50	50	ENSMUST00000117409.8	ENSMUSG00000048997.18	Atxn7l2	chr3	protein_coding	ataxin 7-like 2
chr3	108117033	108117661	-	108115821	108117661	A3SS	0.33	50	50	ENSMUST00000117409.8	ENSMUSG00000048997.18	Atxn7l2	chr3	protein_coding	ataxin 7-like 2
chr3	108116411;108117033	108116905;108117661	-	108116411	108117661	cassetteExon	0.5	100	100	ENSMUST00000102633.9	ENSMUSG00000048997.18	Atxn7l2	chr3	protein_coding	ataxin 7-like 2
chr3	108114920	108115756	-	108114920	108115279	A5SS	0.5	50	50	ENSMUST00000141054.2	ENSMUSG00000048997.18	Atxn7l2	chr3	protein_coding	ataxin 7-like 2
chr3	108179693;108179863	108179782;108187051	+	108179693	108187051	cassetteExon	0.5	100	100	ENSMUST00000090569.10	ENSMUSG00000068749.10	Psma5	chr3	protein_coding	proteasome subunit alpha 5
chr3	108261557	108263547	+	108261557;108262886	108262788;108263547	ES	0.5	50	50	ENSMUST00000135636.6	ENSMUSG00000068747.15	Sort1	chr3	protein_coding	sortilin 1
chr3	108291211	108291552	+	108291242	108291552	A5SS	0.5	50	50	ENSMUST00000090561.10	ENSMUSG00000068744.13	Psrc1	chr3	protein_coding	proline/serine-rich coiled-coil 1
chr3	108291531	108291690	+	108291601	108291690	A5SS&ES	0.5	50	50	ENSMUST00000090561.10	ENSMUSG00000068744.13	Psrc1	chr3	protein_coding	proline/serine-rich coiled-coil 1
chr3	108291211	108291424	+	108291211	108291552	A3SS	0.5	50	50	ENSMUST00000133405.8	ENSMUSG00000068744.13	Psrc1	chr3	protein_coding	proline/serine-rich coiled-coil 1
chr3	108291211;108291601	108291552;108291690	+	108291211;108291531	108291424;108291690	MXE	0.5	100	100	ENSMUST00000130906.8	ENSMUSG00000068744.13	Psrc1	chr3	protein_coding	proline/serine-rich coiled-coil 1
chr3	108299832	108300327	-	108299974	108300327	A3SS	0.5	50	50	ENSMUST00000090558.10	ENSMUSG00000068740.14	Celsr2	chr3	protein_coding	cadherin, EGF LAG seven-pass G-type receptor 2
chr3	108338936	108341365	-	108338936;108340477	108340334;108341365	ES	0.33	50	50	ENSMUST00000090553.12	ENSMUSG00000068739.14	Sars	chr3	protein_coding	seryl-aminoacyl-tRNA synthetase
chr3	108334705;108335248	108335177;108335490	-	108334705	108335490	cassetteExon	0.5	100	100	ENSMUST00000090553.12	ENSMUSG00000068739.14	Sars	chr3	protein_coding	seryl-aminoacyl-tRNA synthetase
chr3	108336778	108341365	-	108336778;108338936	108338781;108341365	ES	0.33	50	50	ENSMUST00000132467.8	ENSMUSG00000068739.14	Sars	chr3	protein_coding	seryl-aminoacyl-tRNA synthetase
chr3	108340477	108341365	-	108336778	108341365	A3SS	0.33	50	50	ENSMUST00000153499.2	ENSMUSG00000068739.14	Sars	chr3	protein_coding	seryl-aminoacyl-tRNA synthetase
chr3	108396338	108443612	-	108396338;108399435	108399315;108443612	ES	0.5	50	50	ENSMUST00000106625.10	ENSMUSG00000040412.18	Elapor1	chr3	protein_coding	endosome-lysosome associated apoptosis and autophagy regulator 1
chr3	108371751	108371954	-	108371751	108372922	A5SS	0.5	50	50	ENSMUST00000106625.10	ENSMUSG00000040412.18	Elapor1	chr3	protein_coding	endosome-lysosome associated apoptosis and autophagy regulator 1
chr3	108396338	108443612	-	108399435	108443612	3pMXE	0.5	50	50	ENSMUST00000148237.2	ENSMUSG00000040412.18	Elapor1	chr3	protein_coding	endosome-lysosome associated apoptosis and autophagy regulator 1
chr3	108467634	108469587	-	108467634	108469403	5pMXE	0.5	50	50	ENSMUST00000106622.3	ENSMUSG00000068732.6	Tmem167b	chr3	protein_coding	transmembrane protein 167B
chr3	108479064	108480196	+	108479068	108480196	A5SS	0.33	50	50	ENSMUST00000131814.8	ENSMUSG00000048100.14	Taf13	chr3	protein_coding	TATA-box binding protein associated factor 13
chr3	108479429	108480196	+	108479068	108480196	A5SS	0.33	50	50	ENSMUST00000131814.8	ENSMUSG00000048100.14	Taf13	chr3	protein_coding	TATA-box binding protein associated factor 13
chr3	108479064	108480196	+	108479429	108480196	A5SS	0.33	50	50	ENSMUST00000056292.8	ENSMUSG00000048100.14	Taf13	chr3	protein_coding	TATA-box binding protein associated factor 13
chr3	108530765	108534519	+	108530765;108532051	108531873;108534519	ES	0.5	50	50	ENSMUST00000051145.15	ENSMUSG00000040389.16	Wdr47	chr3	protein_coding	WD repeat domain 47
chr3	108517359	108518676	+	108517359	108518672	A3SS	0.5	50	50	ENSMUST00000051145.15	ENSMUSG00000040389.16	Wdr47	chr3	protein_coding	WD repeat domain 47
chr3	108526608	108530642	+	108526608	108530639	A3SS	0.5	50	50	ENSMUST00000051145.15	ENSMUSG00000040389.16	Wdr47	chr3	protein_coding	WD repeat domain 47
chr3	108530765	108531911	+	108530765	108531873	A3SS	0.33	50	50	ENSMUST00000051145.15	ENSMUSG00000040389.16	Wdr47	chr3	protein_coding	WD repeat domain 47
chr3	108530765	108534519	+	108530765	108531873	3pMXE	0.33	50	50	ENSMUST00000123568.2	ENSMUSG00000040389.16	Wdr47	chr3	protein_coding	WD repeat domain 47
chr3	108530765;108532051	108531911;108534519	+	108530765	108534519	cassetteExon	0.5	100	100	ENSMUST00000133453.2	ENSMUSG00000040389.16	Wdr47	chr3	protein_coding	WD repeat domain 47
chr3	108569349	108569825	+	108569349	108570840	A3SS	0.33	50	50	ENSMUST00000106609.8	ENSMUSG00000027884.17	Clcc1	chr3	protein_coding	chloride channel CLIC-like 1
chr3	108569349	108569829	+	108569349	108570840	A3SS	0.33	50	50	ENSMUST00000106609.8	ENSMUSG00000027884.17	Clcc1	chr3	protein_coding	chloride channel CLIC-like 1
chr3	108561367	108568671	+	108561296	108568671	A5SS	0.25	50	50	ENSMUST00000106609.8	ENSMUSG00000027884.17	Clcc1	chr3	protein_coding	chloride channel CLIC-like 1
chr3	108561661	108568671	+	108561296	108568671	A5SS	0.25	50	50	ENSMUST00000106609.8	ENSMUSG00000027884.17	Clcc1	chr3	protein_coding	chloride channel CLIC-like 1
chr3	108562066	108568671	+	108561296	108568671	A5SS	0.25	50	50	ENSMUST00000106609.8	ENSMUSG00000027884.17	Clcc1	chr3	protein_coding	chloride channel CLIC-like 1
chr3	108570608	108570840	+	108569349	108570840	A5SS	0.5	50	50	ENSMUST00000106609.8	ENSMUSG00000027884.17	Clcc1	chr3	protein_coding	chloride channel CLIC-like 1
chr3	108569349	108569829	+	108569349	108569825	A3SS	0.33	50	50	ENSMUST00000125274.8	ENSMUSG00000027884.17	Clcc1	chr3	protein_coding	chloride channel CLIC-like 1
chr3	108561367;108562066	108561908;108568671	+	108561367	108568671	cassetteExon	0.5	100	100	ENSMUST00000130352.4	ENSMUSG00000027884.17	Clcc1	chr3	protein_coding	chloride channel CLIC-like 1
chr3	108561661	108568671	+	108561367	108568671	A5SS	0.25	50	50	ENSMUST00000130352.4	ENSMUSG00000027884.17	Clcc1	chr3	protein_coding	chloride channel CLIC-like 1
chr3	108561661	108568671	+	108562066	108568671	A5SS&ES	0.25	50	50	ENSMUST00000029483.15	ENSMUSG00000027884.17	Clcc1	chr3	protein_coding	chloride channel CLIC-like 1
chr3	108610402	108629357	-	108610402;108618896	108618593;108629357	ES	0.5	50	50	ENSMUST00000029482.16	ENSMUSG00000027883.16	Gpsm2	chr3	protein_coding	G-protein signalling modulator 2 (AGS3-like, C. elegans)
chr3	108610402	108629357	-	108610402	108618593	5pMXE	0.5	50	50	ENSMUST00000145558.2	ENSMUSG00000027883.16	Gpsm2	chr3	protein_coding	G-protein signalling modulator 2 (AGS3-like, C. elegans)
chr3	108664619;108667945	108667654;108672426	+	108664619	108672426	cassetteExon	0.5	100	100	ENSMUST00000133931.9	ENSMUSG00000049565.17	Aknad1	chr3	protein_coding	AKNA domain containing 1
chr3	108664619;108667945	108667654;108679226	+	108664619;108672553	108672426;108679226	MXE	0.5	100	100	ENSMUST00000133931.9	ENSMUSG00000049565.17	Aknad1	chr3	protein_coding	AKNA domain containing 1
chr3	108651780	108658866	+	108647168	108658866	A5SS	0.5	50	50	ENSMUST00000133931.9	ENSMUSG00000049565.17	Aknad1	chr3	protein_coding	AKNA domain containing 1
chr3	108667945	108679226	+	108667945;108672553	108672426;108679226	ES	0.5	50	50	ENSMUST00000123556.8	ENSMUSG00000049565.17	Aknad1	chr3	protein_coding	AKNA domain containing 1
chr3	108729204	108733322	-	108729204;108729909	108729831;108733322	ES	0.33	50	50	ENSMUST00000102621.11	ENSMUSG00000027882.19	Stxbp3	chr3	protein_coding	syntaxin binding protein 3
chr3	108733186	108733322	-	108729909	108733322	A3SS	0.33	50	50	ENSMUST00000102621.11	ENSMUSG00000027882.19	Stxbp3	chr3	protein_coding	syntaxin binding protein 3
chr3	108733392	108734342	-	108733398	108734342	A3SS	0.5	50	50	ENSMUST00000102621.11	ENSMUSG00000027882.19	Stxbp3	chr3	protein_coding	syntaxin binding protein 3
chr3	108733186	108733322	-	108729204	108733322	A3SS	0.33	50	50	ENSMUST00000200035.2	ENSMUSG00000027882.19	Stxbp3	chr3	protein_coding	syntaxin binding protein 3
chr3	108774632	108777844	-	108774632;108776670	108776416;108777844	ES	0.5	50	50	ENSMUST00000180063.8	ENSMUSG00000045326.14	Fndc7	chr3	protein_coding	fibronectin type III domain containing 7
chr3	108779686	108788642	-	108779686;108784009	108783752;108788642	ES	0.5	50	50	ENSMUST00000180063.8	ENSMUSG00000045326.14	Fndc7	chr3	protein_coding	fibronectin type III domain containing 7
chr3	108763564	108763665	-	108763581	108763665	A3SS	0.5	50	50	ENSMUST00000180063.8	ENSMUSG00000045326.14	Fndc7	chr3	protein_coding	fibronectin type III domain containing 7
chr3	108763726	108765744	-	108763726	108766194	A5SS	0.5	50	50	ENSMUST00000180063.8	ENSMUSG00000045326.14	Fndc7	chr3	protein_coding	fibronectin type III domain containing 7
chr3	108790942	108796409	-	108790942	108790995	A5SS&ES	0.5	50	50	ENSMUST00000180063.8	ENSMUSG00000045326.14	Fndc7	chr3	protein_coding	fibronectin type III domain containing 7
chr3	108815720	108818480	-	108815720;108817711	108817659;108818480	ES	0.5	50	50	ENSMUST00000129273.8	ENSMUSG00000027881.15	Prpf38b	chr3	protein_coding	PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
chr3	108812650;108813304	108813234;108815103	-	108812650	108815103	cassetteExon	0.5	100	100	ENSMUST00000129273.8	ENSMUSG00000027881.15	Prpf38b	chr3	protein_coding	PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
chr3	108812650;108813441	108813234;108815103	-	108812650	108815103	cassetteExon	0.5	100	100	ENSMUST00000129273.8	ENSMUSG00000027881.15	Prpf38b	chr3	protein_coding	PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
chr3	108812650;108813441	108813388;108815103	-	108812650	108815103	cassetteExon	0.5	100	100	ENSMUST00000129273.8	ENSMUSG00000027881.15	Prpf38b	chr3	protein_coding	PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
chr3	108812650;108813441	108813390;108815103	-	108812650	108815103	cassetteExon	0.5	100	100	ENSMUST00000129273.8	ENSMUSG00000027881.15	Prpf38b	chr3	protein_coding	PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
chr3	108815399	108815642	-	108815399	108815652	A5SS	0.5	50	50	ENSMUST00000129273.8	ENSMUSG00000027881.15	Prpf38b	chr3	protein_coding	PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
chr3	108812650;108813441	108813388;108815103	-	108812650;108813304	108813234;108815103	MXE	0.5	100	100	ENSMUST00000199735.5	ENSMUSG00000027881.15	Prpf38b	chr3	protein_coding	PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
chr3	108812650;108813441	108813390;108815103	-	108812650;108813304	108813234;108815103	MXE	0.5	100	100	ENSMUST00000199735.5	ENSMUSG00000027881.15	Prpf38b	chr3	protein_coding	PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
chr3	108812650	108815103	-	108812650	108813390	5pMXE	0.25	50	50	ENSMUST00000127478.8	ENSMUSG00000027881.15	Prpf38b	chr3	protein_coding	PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
chr3	108812650	108813234	-	108812650	108813390	A5SS	0.25	50	50	ENSMUST00000127478.8	ENSMUSG00000027881.15	Prpf38b	chr3	protein_coding	PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
chr3	108812650	108813388	-	108812650	108813390	A5SS	0.25	50	50	ENSMUST00000127478.8	ENSMUSG00000027881.15	Prpf38b	chr3	protein_coding	PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
chr3	108848732	108860127	+	108848732	108850043	3pMXE	0.5	50	50	ENSMUST00000197427.5	ENSMUSG00000045662.18	Henmt1	chr3	protein_coding	HEN1 methyltransferase homolog 1 (Arabidopsis)
chr3	108847747	108848585	+	108847733	108848585	A5SS	0.33	50	50	ENSMUST00000197427.5	ENSMUSG00000045662.18	Henmt1	chr3	protein_coding	HEN1 methyltransferase homolog 1 (Arabidopsis)
chr3	108847905	108848585	+	108847733	108848585	A5SS	0.33	50	50	ENSMUST00000197427.5	ENSMUSG00000045662.18	Henmt1	chr3	protein_coding	HEN1 methyltransferase homolog 1 (Arabidopsis)
chr3	108848732	108860127	+	108848732;108850171	108850043;108860127	ES	0.5	50	50	ENSMUST00000059946.11	ENSMUSG00000045662.18	Henmt1	chr3	protein_coding	HEN1 methyltransferase homolog 1 (Arabidopsis)
chr3	108861250	108865053	+	108861250	108864931	A3SS	0.5	50	50	ENSMUST00000059946.11	ENSMUSG00000045662.18	Henmt1	chr3	protein_coding	HEN1 methyltransferase homolog 1 (Arabidopsis)
chr3	108866035	108866373	+	108866035	108867226	A3SS	0.5	50	50	ENSMUST00000059946.11	ENSMUSG00000045662.18	Henmt1	chr3	protein_coding	HEN1 methyltransferase homolog 1 (Arabidopsis)
chr3	108847905	108848585	+	108847747	108848585	A5SS	0.33	50	50	ENSMUST00000059946.11	ENSMUSG00000045662.18	Henmt1	chr3	protein_coding	HEN1 methyltransferase homolog 1 (Arabidopsis)
chr3	108988150	109001524	+	108993175	109001524	A5SS&ES	0.5	50	50	ENSMUST00000029478.5	ENSMUSG00000027880.7	Slc25a54	chr3	protein_coding	solute carrier family 25, member 54
chr3	109043654	109062310	+	109043654;109056886	109056799;109062310	ES	0.5	50	50	ENSMUST00000029477.11	ENSMUSG00000040322.11	Slc25a24	chr3	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24
chr3	109331423	109349318	+	109331423	109402094	A3SS	0.5	50	50	ENSMUST00000046864.14	ENSMUSG00000033721.17	Vav3	chr3	protein_coding	vav 3 oncogene
chr3	109554884	109554988	+	109535483	109554988	A5SS	0.5	50	50	ENSMUST00000046864.14	ENSMUSG00000033721.17	Vav3	chr3	protein_coding	vav 3 oncogene
chr3	109690227	109759081	-	109690227;109748891	109748826;109759081	ES	0.25	50	50	ENSMUST00000156177.9	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109759107	109841885	-	109759107;109779688	109779516;109841885	ES	0.5	50	50	ENSMUST00000156177.9	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109690227;109735077	109734943;109759081	-	109690227;109748891	109748826;109759081	MXE	0.5	100	100	ENSMUST00000156177.9	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109690227;109739951	109739784;109759081	-	109690227;109748891	109748826;109759081	MXE	0.5	100	100	ENSMUST00000156177.9	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109690227;109746495	109746436;109748826	-	109690227	109748826	cassetteExon	0.5	100	100	ENSMUST00000156177.9	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109748891;109771735	109771607;109779516	-	109748891;109759107	109759081;109779516	MXE	0.5	100	100	ENSMUST00000156177.9	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109778949	109779516	-	109759107	109779516	A3SS	0.33	50	50	ENSMUST00000156177.9	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109748891	109760381	-	109748891	109759081	A5SS&ES	0.33	50	50	ENSMUST00000156177.9	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109690227;109735077	109734943;109759081	-	109690227	109759081	cassetteExon	0.5	100	100	ENSMUST00000133268.9	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109690227;109739951	109739784;109759081	-	109690227	109759081	cassetteExon	0.5	100	100	ENSMUST00000133268.9	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109771735	109779516	-	109759107	109779516	A3SS	0.33	50	50	ENSMUST00000133268.9	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109690227	109746436	-	109690227	109759081	A5SS	0.2	50	50	ENSMUST00000133268.9	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109690227;109735077	109734943;109739784	-	109690227	109739784	cassetteExon	0.5	100	100	ENSMUST00000128219.9	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109690227;109735077	109734943;109759081	-	109690227;109739951	109739784;109759081	MXE	0.5	100	100	ENSMUST00000128219.9	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109690227	109746436	-	109690227	109739784	A5SS&ES	0.2	50	50	ENSMUST00000128219.9	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109739951	109778923	-	109739951	109759081	A5SS&ES	0.5	50	50	ENSMUST00000128219.9	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109690227;109735077	109734943;109759081	-	109690227;109748891	109746436;109759081	MXE	0.5	100	100	ENSMUST00000138953.9	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109690227;109739951	109739784;109759081	-	109690227;109748891	109746436;109759081	MXE	0.5	100	100	ENSMUST00000138953.9	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109735077	109759081	-	109735077;109739951	109739784;109759081	ES	0.25	50	50	ENSMUST00000072596.12	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109690227;109748891	109748826;109759081	-	109690227;109739951	109734943;109759081	MXE	0.5	100	100	ENSMUST00000072596.12	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109739951;109778949	109778923;109779516	-	109739951;109759107	109759081;109779516	MXE	0.5	100	100	ENSMUST00000072596.12	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109690227	109746436	-	109690227	109734943	A5SS&ES	0.2	50	50	ENSMUST00000072596.12	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109690227;109759107	109759081;109841885	-	109690227;109779688	109746436;109841885	MXE	0.5	100	100	ENSMUST00000106571.10	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109748891;109759107	109759081;109841885	-	109748891;109779688	109760381;109841885	MXE	0.5	100	100	ENSMUST00000106571.10	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109748891	109771607	-	109748891	109760381	A5SS&ES	0.33	50	50	ENSMUST00000106571.10	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109690227;109759107	109759081;109779516	-	109690227;109778949	109734943;109779516	MXE	0.5	100	100	ENSMUST00000106575.10	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109735077;109759107	109759081;109779516	-	109735077;109778949	109739784;109779516	MXE	0.5	100	100	ENSMUST00000106575.10	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109690227;109759107	109759081;109841885	-	109690227;109779688	109734943;109841885	MXE	0.5	100	100	ENSMUST00000106575.10	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109735077;109759107	109759081;109841885	-	109735077;109779688	109739784;109841885	MXE	0.5	100	100	ENSMUST00000106575.10	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109739951;109759107	109759081;109841885	-	109739951;109779688	109778923;109841885	MXE	0.5	100	100	ENSMUST00000106575.10	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109771735	109779516	-	109778949	109779516	A3SS&ES	0.33	50	50	ENSMUST00000106575.10	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109690227	109748826	-	109690227	109734943	A5SS&ES	0.2	50	50	ENSMUST00000106575.10	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109690227;109759107	109759081;109779516	-	109690227;109771735	109748826;109779516	MXE	0.5	100	100	ENSMUST00000106570.5	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109690227;109759107	109759081;109841885	-	109690227;109779688	109748826;109841885	MXE	0.5	100	100	ENSMUST00000106570.5	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109748891;109759107	109759081;109841885	-	109748891;109779688	109771607;109841885	MXE	0.5	100	100	ENSMUST00000106570.5	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109690227	109739784	-	109690227	109748826	A5SS	0.2	50	50	ENSMUST00000106570.5	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109690227	109759081	-	109739951	109759081	3pMXE	0.25	50	50	ENSMUST00000189335.2	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109735077	109759081	-	109739951	109759081	3pMXE	0.25	50	50	ENSMUST00000189335.2	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	109748891	109759081	-	109739951	109759081	A3SS	0.25	50	50	ENSMUST00000189335.2	ENSMUSG00000059857.16	Ntng1	chr3	protein_coding	netrin G1
chr3	113363706	113399221	-	113363706	113371350	5pMXE	0.25	50	50	ENSMUST00000067980.12	ENSMUSG00000074264.13	Amy1	chr3	protein_coding	amylase 1, salivary
chr3	113363706	113367820	-	113363706	113371350	A5SS	0.25	50	50	ENSMUST00000067980.12	ENSMUSG00000074264.13	Amy1	chr3	protein_coding	amylase 1, salivary
chr3	113363706	113368253	-	113363706	113371350	A5SS	0.25	50	50	ENSMUST00000067980.12	ENSMUSG00000074264.13	Amy1	chr3	protein_coding	amylase 1, salivary
chr3	113363706	113399221	-	113363706	113368253	5pMXE	0.25	50	50	ENSMUST00000106540.8	ENSMUSG00000074264.13	Amy1	chr3	protein_coding	amylase 1, salivary
chr3	113363706	113367820	-	113363706	113368253	A5SS	0.25	50	50	ENSMUST00000106540.8	ENSMUSG00000074264.13	Amy1	chr3	protein_coding	amylase 1, salivary
chr3	113363706	113399221	-	113363706	113367820	5pMXE	0.25	50	50	ENSMUST00000142505.9	ENSMUSG00000074264.13	Amy1	chr3	protein_coding	amylase 1, salivary
chr3	113402057	113402687	-	113402060	113402687	A3SS	0.5	50	50	ENSMUST00000153853.8	ENSMUSG00000027981.15	Rnpc3	chr3	protein_coding	RNA-binding region (RNP1, RRM) containing 3
chr3	113399296	113401989	-	113400948	113401989	A3SS	0.5	50	50	ENSMUST00000092154.10	ENSMUSG00000027981.15	Rnpc3	chr3	protein_coding	RNA-binding region (RNP1, RRM) containing 3
chr3	113883906;113888282	113888166;113888850	+	113883906;113888662	113888510;113888850	MXE	0.5	100	100	ENSMUST00000123619.8	ENSMUSG00000027966.21	Col11a1	chr3	protein_coding	collagen, type XI, alpha 1
chr3	113926838;113931835	113931820;113932049	+	113926838	113932049	cassetteExon	0.5	100	100	ENSMUST00000092155.12	ENSMUSG00000027966.21	Col11a1	chr3	protein_coding	collagen, type XI, alpha 1
chr3	114005834;114006129	114006045;114006867	+	114005834	114006867	cassetteExon	0.5	100	100	ENSMUST00000092155.12	ENSMUSG00000027966.21	Col11a1	chr3	protein_coding	collagen, type XI, alpha 1
chr3	114698353	114883730	+	114698200	114883730	A5SS	0.33	50	50	ENSMUST00000081752.13	ENSMUSG00000027965.16	Olfm3	chr3	protein_coding	olfactomedin 3
chr3	114874834	114883730	+	114698200	114883730	A5SS	0.33	50	50	ENSMUST00000081752.13	ENSMUSG00000027965.16	Olfm3	chr3	protein_coding	olfactomedin 3
chr3	114874834	114883730	+	114698353	114883730	A5SS	0.33	50	50	ENSMUST00000149158.8	ENSMUSG00000027965.16	Olfm3	chr3	protein_coding	olfactomedin 3
chr3	115675487	115681425	-	115675487;115680024	115679863;115681425	ES	0.5	50	50	ENSMUST00000188260.7	ENSMUSG00000054426.12	A930005H10Rik	chr3	lncRNA	RIKEN cDNA A930005H10 gene
chr3	115675487	115679971	-	115675487	115679863	A5SS	0.25	50	50	ENSMUST00000188260.7	ENSMUSG00000054426.12	A930005H10Rik	chr3	lncRNA	RIKEN cDNA A930005H10 gene
chr3	115675487	115681413	-	115675487	115679863	A5SS&ES	0.25	50	50	ENSMUST00000188260.7	ENSMUSG00000054426.12	A930005H10Rik	chr3	lncRNA	RIKEN cDNA A930005H10 gene
chr3	115675487	115679971	-	115675487	115681413	A5SS	0.25	50	50	ENSMUST00000185681.2	ENSMUSG00000054426.12	A930005H10Rik	chr3	lncRNA	RIKEN cDNA A930005H10 gene
chr3	115675487	115681425	-	115675487	115681413	A5SS	0.25	50	50	ENSMUST00000185681.2	ENSMUSG00000054426.12	A930005H10Rik	chr3	lncRNA	RIKEN cDNA A930005H10 gene
chr3	115675487;115680024	115679971;115681425	-	115675487	115681425	cassetteExon	0.5	100	100	ENSMUST00000185424.2	ENSMUSG00000054426.12	A930005H10Rik	chr3	lncRNA	RIKEN cDNA A930005H10 gene
chr3	115675487	115681425	-	115680024	115681425	3pMXE	0.5	50	50	ENSMUST00000185512.2	ENSMUSG00000054426.12	A930005H10Rik	chr3	lncRNA	RIKEN cDNA A930005H10 gene
chr3	115681811	115682089	+	115681806	115682089	A5SS	0.33	50	50	ENSMUST00000189799.7	ENSMUSG00000033554.18	Dph5	chr3	protein_coding	diphthamide biosynthesis 5
chr3	115681926	115682089	+	115681806	115682089	A5SS	0.33	50	50	ENSMUST00000189799.7	ENSMUSG00000033554.18	Dph5	chr3	protein_coding	diphthamide biosynthesis 5
chr3	115681926	115682089	+	115681811	115682089	A5SS	0.33	50	50	ENSMUST00000200258.2	ENSMUSG00000033554.18	Dph5	chr3	protein_coding	diphthamide biosynthesis 5
chr3	115718900	115720346	+	115718900	115727088	A3SS	0.5	50	50	ENSMUST00000185098.8	ENSMUSG00000033554.18	Dph5	chr3	protein_coding	diphthamide biosynthesis 5
chr3	115784463	115786355	-	115784463	115786575	A5SS	0.5	50	50	ENSMUST00000067485.4	ENSMUSG00000054414.5	Slc30a7	chr3	protein_coding	solute carrier family 30 (zinc transporter), member 7
chr3	115801531	115817656	+	115801531;115804345	115804271;115817656	ES	0.33	50	50	ENSMUST00000029575.12	ENSMUSG00000027963.15	Extl2	chr3	protein_coding	exostosin-like glycosyltransferase 2
chr3	115801531;115802186	115802010;115804271	+	115801531	115804271	cassetteExon	0.5	100	100	ENSMUST00000029575.12	ENSMUSG00000027963.15	Extl2	chr3	protein_coding	exostosin-like glycosyltransferase 2
chr3	115804345;115805935	115805836;115817656	+	115804345	115817656	cassetteExon	0.5	100	100	ENSMUST00000029575.12	ENSMUSG00000027963.15	Extl2	chr3	protein_coding	exostosin-like glycosyltransferase 2
chr3	115804345	115804486	+	115804345	115817656	A3SS	0.33	50	50	ENSMUST00000029575.12	ENSMUSG00000027963.15	Extl2	chr3	protein_coding	exostosin-like glycosyltransferase 2
chr3	115801531	115802010	+	115801531	115817656	A3SS	0.33	50	50	ENSMUST00000106501.8	ENSMUSG00000027963.15	Extl2	chr3	protein_coding	exostosin-like glycosyltransferase 2
chr3	115805935	115817656	+	115801531	115817656	A5SS	0.33	50	50	ENSMUST00000106501.8	ENSMUSG00000027963.15	Extl2	chr3	protein_coding	exostosin-like glycosyltransferase 2
chr3	115801531	115804271	+	115801531	115802010	3pMXE	0.33	50	50	ENSMUST00000128228.2	ENSMUSG00000027963.15	Extl2	chr3	protein_coding	exostosin-like glycosyltransferase 2
chr3	115804345	115804486	+	115804345	115805836	A3SS	0.33	50	50	ENSMUST00000145945.8	ENSMUSG00000027963.15	Extl2	chr3	protein_coding	exostosin-like glycosyltransferase 2
chr3	115801531	115804271	+	115802186	115804271	5pMXE	0.5	50	50	ENSMUST00000106502.2	ENSMUSG00000027963.15	Extl2	chr3	protein_coding	exostosin-like glycosyltransferase 2
chr3	115917442	115918032	-	115914722	115918032	A3SS	0.5	50	50	ENSMUST00000029574.13	ENSMUSG00000027962.15	Vcam1	chr3	protein_coding	vascular cell adhesion molecule 1
chr3	116046378	116046763	-	116046381	116046763	A3SS	0.5	50	50	ENSMUST00000090473.7	ENSMUSG00000068696.7	Gpr88	chr3	protein_coding	G-protein coupled receptor 88
chr3	116046381	116046704	-	116046381	116046763	A5SS	0.5	50	50	ENSMUST00000090473.7	ENSMUSG00000068696.7	Gpr88	chr3	protein_coding	G-protein coupled receptor 88
chr3	116186563	116216216	-	116186563;116198267	116198192;116216216	ES	0.5	50	50	ENSMUST00000106491.7	ENSMUSG00000033502.16	Cdc14a	chr3	protein_coding	CDC14 cell division cycle 14A
chr3	116216306	116222346	-	116216306	116217086	5pMXE	0.33	50	50	ENSMUST00000106491.7	ENSMUSG00000033502.16	Cdc14a	chr3	protein_coding	CDC14 cell division cycle 14A
chr3	116160355	116186471	-	116142165	116186471	A3SS	0.5	50	50	ENSMUST00000106491.7	ENSMUSG00000033502.16	Cdc14a	chr3	protein_coding	CDC14 cell division cycle 14A
chr3	116197993	116198192	-	116186563	116198192	A3SS	0.5	50	50	ENSMUST00000106491.7	ENSMUSG00000033502.16	Cdc14a	chr3	protein_coding	CDC14 cell division cycle 14A
chr3	116142165	116144855	-	116142165	116186471	A5SS	0.5	50	50	ENSMUST00000106491.7	ENSMUSG00000033502.16	Cdc14a	chr3	protein_coding	CDC14 cell division cycle 14A
chr3	116216306	116216621	-	116216306	116217086	A5SS	0.33	50	50	ENSMUST00000106491.7	ENSMUSG00000033502.16	Cdc14a	chr3	protein_coding	CDC14 cell division cycle 14A
chr3	116216306	116216621	-	116216306	116222346	A5SS	0.33	50	50	ENSMUST00000239145.2	ENSMUSG00000033502.16	Cdc14a	chr3	protein_coding	CDC14 cell division cycle 14A
chr3	116186563	116216216	-	116198267	116216216	3pMXE	0.5	50	50	ENSMUST00000148857.8	ENSMUSG00000033502.16	Cdc14a	chr3	protein_coding	CDC14 cell division cycle 14A
chr3	116298095	116300484	-	116298117	116300484	A3SS	0.5	50	50	ENSMUST00000000348.15	ENSMUSG00000000339.15	Rtca	chr3	protein_coding	RNA 3'-terminal phosphate cyclase
chr3	116300642	116301400	-	116300627	116301400	A3SS	0.5	50	50	ENSMUST00000000348.15	ENSMUSG00000000339.15	Rtca	chr3	protein_coding	RNA 3'-terminal phosphate cyclase
chr3	116300642	116301594	-	116301500	116301594	A3SS&ES	0.5	50	50	ENSMUST00000000348.15	ENSMUSG00000000339.15	Rtca	chr3	protein_coding	RNA 3'-terminal phosphate cyclase
chr3	116300642	116301594	-	116300642;116301500	116301400;116301594	ES	0.5	50	50	ENSMUST00000140677.8	ENSMUSG00000000339.15	Rtca	chr3	protein_coding	RNA 3'-terminal phosphate cyclase
chr3	116314009	116326904	+	116314009;116317076	116317001;116326904	ES	0.33	50	50	ENSMUST00000000349.11	ENSMUSG00000000340.11	Dbt	chr3	protein_coding	dihydrolipoamide branched chain transacylase E2
chr3	116306840;116314009	116313886;116326904	+	116306840	116326904	cassetteExon	0.5	100	100	ENSMUST00000197201.5	ENSMUSG00000000340.11	Dbt	chr3	protein_coding	dihydrolipoamide branched chain transacylase E2
chr3	116317076	116326904	+	116306840	116326904	A5SS	0.33	50	50	ENSMUST00000197201.5	ENSMUSG00000000340.11	Dbt	chr3	protein_coding	dihydrolipoamide branched chain transacylase E2
chr3	116385908	116388288	-	116385908;116386159	116386113;116388288	ES	0.5	50	50	ENSMUST00000041524.11	ENSMUSG00000033439.13	Trmt13	chr3	protein_coding	tRNA methyltransferase 13
chr3	116383941;116384205	116384054;116385842	-	116383941	116385842	cassetteExon	0.5	100	100	ENSMUST00000041524.11	ENSMUSG00000033439.13	Trmt13	chr3	protein_coding	tRNA methyltransferase 13
chr3	116376373	116378845	-	116376572	116378845	A3SS	0.5	50	50	ENSMUST00000041524.11	ENSMUSG00000033439.13	Trmt13	chr3	protein_coding	tRNA methyltransferase 13
chr3	116382173	116383140	-	116382288	116383140	A3SS	0.5	50	50	ENSMUST00000041524.11	ENSMUSG00000033439.13	Trmt13	chr3	protein_coding	tRNA methyltransferase 13
chr3	116389242	116407680	-	116389242	116407408	A5SS	0.5	50	50	ENSMUST00000041524.11	ENSMUSG00000033439.13	Trmt13	chr3	protein_coding	tRNA methyltransferase 13
chr3	116385908	116388288	-	116386159	116388288	A3SS	0.5	50	50	ENSMUST00000124807.2	ENSMUSG00000033439.13	Trmt13	chr3	protein_coding	tRNA methyltransferase 13
chr3	116388827	116398846	+	116388827;116397171	116397111;116398846	ES	0.33	50	50	ENSMUST00000198386.5	ENSMUSG00000027959.15	Sass6	chr3	protein_coding	SAS-6 centriolar assembly protein
chr3	116388827;116396012	116395938;116397111	+	116388827	116397111	cassetteExon	0.5	100	100	ENSMUST00000198386.5	ENSMUSG00000027959.15	Sass6	chr3	protein_coding	SAS-6 centriolar assembly protein
chr3	116397171;116397996	116397914;116398846	+	116397171	116398846	cassetteExon	0.5	100	100	ENSMUST00000198386.5	ENSMUSG00000027959.15	Sass6	chr3	protein_coding	SAS-6 centriolar assembly protein
chr3	116407022	116407555	+	116404032	116407555	A5SS	0.5	50	50	ENSMUST00000198386.5	ENSMUSG00000027959.15	Sass6	chr3	protein_coding	SAS-6 centriolar assembly protein
chr3	116388827	116395938	+	116388827	116398846	A3SS	0.33	50	50	ENSMUST00000197335.2	ENSMUSG00000027959.15	Sass6	chr3	protein_coding	SAS-6 centriolar assembly protein
chr3	116397996	116398846	+	116388827	116398846	A5SS	0.33	50	50	ENSMUST00000197335.2	ENSMUSG00000027959.15	Sass6	chr3	protein_coding	SAS-6 centriolar assembly protein
chr3	116445148	116471512	-	116445148	116456044	5pMXE	0.5	50	50	ENSMUST00000029570.9	ENSMUSG00000089911.5	Mfsd14a	chr3	protein_coding	major facilitator superfamily domain containing 14A
chr3	116468953	116471512	-	116445148	116471512	A3SS	0.5	50	50	ENSMUST00000140672.3	ENSMUSG00000105103.2	Gm43191	chr3	protein_coding	predicted gene 43191
chr3	116488283;116489405	116489238;116505732	-	116488283	116505732	cassetteExon	0.5	100	100	ENSMUST00000029569.9	ENSMUSG00000027957.14	Slc35a3	chr3	protein_coding	solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3
chr3	116488283;116494122	116494076;116505732	-	116488283	116505732	cassetteExon	0.5	100	100	ENSMUST00000029569.9	ENSMUSG00000027957.14	Slc35a3	chr3	protein_coding	solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3
chr3	116468953	116469511	-	116468953	116471512	A5SS	0.5	50	50	ENSMUST00000029569.9	ENSMUSG00000027957.14	Slc35a3	chr3	protein_coding	solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3
chr3	116488283	116505332	-	116488283	116505732	A5SS	0.25	50	50	ENSMUST00000029569.9	ENSMUSG00000027957.14	Slc35a3	chr3	protein_coding	solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3
chr3	116488283;116494122	116494076;116505732	-	116488283;116489405	116489238;116505732	MXE	0.5	100	100	ENSMUST00000120120.8	ENSMUSG00000027957.14	Slc35a3	chr3	protein_coding	solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3
chr3	116488283	116505332	-	116488283	116489238	A5SS&ES	0.25	50	50	ENSMUST00000120120.8	ENSMUSG00000027957.14	Slc35a3	chr3	protein_coding	solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3
chr3	116488283	116494076	-	116488283	116505332	A5SS	0.25	50	50	ENSMUST00000153108.6	ENSMUSG00000027957.14	Slc35a3	chr3	protein_coding	solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3
chr3	116582356;116583524	116583420;116584655	-	116582356	116584655	cassetteExon	0.5	100	100	ENSMUST00000040603.14	ENSMUSG00000033400.15	Agl	chr3	protein_coding	amylo-1,6-glucosidase, 4-alpha-glucanotransferase
chr3	116542692	116544047	-	116540353	116544047	A3SS	0.5	50	50	ENSMUST00000040603.14	ENSMUSG00000033400.15	Agl	chr3	protein_coding	amylo-1,6-glucosidase, 4-alpha-glucanotransferase
chr3	116578289	116578753	-	116578289	116578709	A5SS	0.5	50	50	ENSMUST00000040603.14	ENSMUSG00000033400.15	Agl	chr3	protein_coding	amylo-1,6-glucosidase, 4-alpha-glucanotransferase
chr3	116601066	116601197	-	116601066	116601677	A5SS	0.5	50	50	ENSMUST00000040603.14	ENSMUSG00000033400.15	Agl	chr3	protein_coding	amylo-1,6-glucosidase, 4-alpha-glucanotransferase
chr3	116694350	116695963	+	116694350;116694660	116694602;116695963	ES	0.5	50	50	ENSMUST00000040260.11	ENSMUSG00000033386.11	Frrs1	chr3	protein_coding	ferric-chelate reductase 1
chr3	116672099	116674416	+	116672099	116678756	A3SS	0.5	50	50	ENSMUST00000199626.2	ENSMUSG00000033386.11	Frrs1	chr3	protein_coding	ferric-chelate reductase 1
chr3	116676845	116678756	+	116672099	116678756	A5SS	0.5	50	50	ENSMUST00000199626.2	ENSMUSG00000033386.11	Frrs1	chr3	protein_coding	ferric-chelate reductase 1
chr3	116746786	116762560	-	116746786	116762147	A5SS	0.5	50	50	ENSMUST00000040097.14	ENSMUSG00000033377.15	Palmd	chr3	protein_coding	palmdelphin
chr3	117116886	117120334	-	117116886;117119612	117119439;117120334	ES	0.5	50	50	ENSMUST00000061071.13	ENSMUSG00000044667.13	Plppr4	chr3	protein_coding	phospholipid phosphatase related 4
chr3	117465668;117478440	117478313;117480265	+	117465668	117480265	cassetteExon	0.5	100	100	ENSMUST00000239347.2	ENSMUSG00000033342.16	Plppr5	chr3	protein_coding	phospholipid phosphatase related 5
chr3	117369581	117414618	+	117278812	117414618	A5SS	0.5	50	50	ENSMUST00000239347.2	ENSMUSG00000033342.16	Plppr5	chr3	protein_coding	phospholipid phosphatase related 5
chr3	117465683	117480265	+	117465668	117480265	A5SS	0.33	50	50	ENSMUST00000239347.2	ENSMUSG00000033342.16	Plppr5	chr3	protein_coding	phospholipid phosphatase related 5
chr3	117465683	117480265	+	117478440	117480265	A5SS&ES	0.33	50	50	ENSMUST00000238937.2	ENSMUSG00000033342.16	Plppr5	chr3	protein_coding	phospholipid phosphatase related 5
chr3	117576025	117623226	-	117576025;117594642	117594490;117623226	ES	0.5	50	50	ENSMUST00000029639.12	ENSMUSG00000028007.14	Snx7	chr3	protein_coding	sorting nexin 7
chr3	117630985	117633577	-	117630985;117632633	117632469;117633577	ES	0.5	50	50	ENSMUST00000029639.12	ENSMUSG00000028007.14	Snx7	chr3	protein_coding	sorting nexin 7
chr3	118227655;118252431	118252364;118307787	+	118227655	118307787	cassetteExon	0.5	100	100	ENSMUST00000180593.2	ENSMUSG00000097311.8	Gm26871	chr3	lncRNA	predicted gene, 26871
chr3	118252431	118266671	+	118252431	118307787	A3SS	0.5	50	50	ENSMUST00000181926.8	ENSMUSG00000097311.8	Gm26871	chr3	lncRNA	predicted gene, 26871
chr3	118307916	118309376	+	118307916	118322280	A3SS	0.5	50	50	ENSMUST00000181310.2	ENSMUSG00000097311.8	Gm26871	chr3	lncRNA	predicted gene, 26871
chr3	119517835	119519715	-	119517835;119518294	119518261;119519715	ES	0.5	50	50	ENSMUST00000029780.12	ENSMUSG00000028134.12	Ptbp2	chr3	protein_coding	polypyrimidine tract binding protein 2
chr3	119575183	119577172	-	119575183	119576851	5pMXE	0.33	50	50	ENSMUST00000029780.12	ENSMUSG00000028134.12	Ptbp2	chr3	protein_coding	polypyrimidine tract binding protein 2
chr3	119575183	119577928	-	119575183	119576851	5pMXE	0.33	50	50	ENSMUST00000029780.12	ENSMUSG00000028134.12	Ptbp2	chr3	protein_coding	polypyrimidine tract binding protein 2
chr3	119514106	119514256	-	119514109	119514256	A3SS	0.5	50	50	ENSMUST00000029780.12	ENSMUSG00000028134.12	Ptbp2	chr3	protein_coding	polypyrimidine tract binding protein 2
chr3	119519869	119533964	-	119519854	119533964	A3SS	0.33	50	50	ENSMUST00000029780.12	ENSMUSG00000028134.12	Ptbp2	chr3	protein_coding	polypyrimidine tract binding protein 2
chr3	119554380	119555352	-	119546765	119555352	A3SS	0.5	50	50	ENSMUST00000029780.12	ENSMUSG00000028134.12	Ptbp2	chr3	protein_coding	polypyrimidine tract binding protein 2
chr3	119519854	119533964	-	119514654	119533964	A3SS	0.33	50	50	ENSMUST00000196203.2	ENSMUSG00000028134.12	Ptbp2	chr3	protein_coding	polypyrimidine tract binding protein 2
chr3	119519869	119533964	-	119514654	119533964	A3SS	0.33	50	50	ENSMUST00000196203.2	ENSMUSG00000028134.12	Ptbp2	chr3	protein_coding	polypyrimidine tract binding protein 2
chr3	119514654	119517743	-	119514654	119533964	A5SS	0.5	50	50	ENSMUST00000196203.2	ENSMUSG00000028134.12	Ptbp2	chr3	protein_coding	polypyrimidine tract binding protein 2
chr3	119575183	119577172	-	119575183	119577928	A5SS	0.33	50	50	ENSMUST00000198399.5	ENSMUSG00000028134.12	Ptbp2	chr3	protein_coding	polypyrimidine tract binding protein 2
chr3	120591318	120680162	-	120591318;120593396	120593310;120680162	ES	0.5	50	50	ENSMUST00000182124.8	ENSMUSG00000098097.8	6530403H02Rik	chr3	lncRNA	RIKEN cDNA 6530403H02 gene
chr3	120566436	120591241	-	120469771	120591241	A3SS	0.5	50	50	ENSMUST00000182124.8	ENSMUSG00000098097.8	6530403H02Rik	chr3	lncRNA	RIKEN cDNA 6530403H02 gene
chr3	120488914	120566331	-	120488206	120566331	A3SS	0.5	50	50	ENSMUST00000183276.8	ENSMUSG00000098097.8	6530403H02Rik	chr3	lncRNA	RIKEN cDNA 6530403H02 gene
chr3	120952904;120953625	120953396;120965241	-	120952904	120965241	cassetteExon	0.5	100	100	ENSMUST00000106466.10	ENSMUSG00000028133.18	Rwdd3	chr3	protein_coding	RWD domain containing 3
chr3	120952904;120953625	120953419;120965241	-	120952904	120965241	cassetteExon	0.5	100	100	ENSMUST00000106466.10	ENSMUSG00000028133.18	Rwdd3	chr3	protein_coding	RWD domain containing 3
chr3	120952904;120965068	120964761;120965241	-	120952904	120965241	cassetteExon	0.5	100	100	ENSMUST00000106466.10	ENSMUSG00000028133.18	Rwdd3	chr3	protein_coding	RWD domain containing 3
chr3	120949706	120949862	-	120949706	120949836	A5SS	0.5	50	50	ENSMUST00000106466.10	ENSMUSG00000028133.18	Rwdd3	chr3	protein_coding	RWD domain containing 3
chr3	120950165	120952464	-	120950165	120952417	A5SS	0.5	50	50	ENSMUST00000106466.10	ENSMUSG00000028133.18	Rwdd3	chr3	protein_coding	RWD domain containing 3
chr3	120952904;120953625	120953396;120965241	-	120952904;120965068	120964761;120965241	MXE	0.5	100	100	ENSMUST00000106467.8	ENSMUSG00000028133.18	Rwdd3	chr3	protein_coding	RWD domain containing 3
chr3	120952904;120953625	120953419;120965241	-	120952904;120965068	120964761;120965241	MXE	0.5	100	100	ENSMUST00000106467.8	ENSMUSG00000028133.18	Rwdd3	chr3	protein_coding	RWD domain containing 3
chr3	120952904	120953396	-	120952904	120953419	A5SS	0.25	50	50	ENSMUST00000164925.9	ENSMUSG00000028133.18	Rwdd3	chr3	protein_coding	RWD domain containing 3
chr3	121029413;121073874	121073767;121073990	-	121029413;121040735	121040651;121073990	MXE	0.5	100	100	ENSMUST00000135818.8	ENSMUSG00000028132.16	Tlcd4	chr3	protein_coding	TLC domain containing 4
chr3	121029413	121046334	-	121029413	121040651	A5SS&ES	0.14	50	50	ENSMUST00000135818.8	ENSMUSG00000028132.16	Tlcd4	chr3	protein_coding	TLC domain containing 4
chr3	121029413	121056349	-	121029413	121040651	A5SS&ES	0.14	50	50	ENSMUST00000135818.8	ENSMUSG00000028132.16	Tlcd4	chr3	protein_coding	TLC domain containing 4
chr3	121029413	121056823	-	121029413	121040651	A5SS&ES	0.14	50	50	ENSMUST00000135818.8	ENSMUSG00000028132.16	Tlcd4	chr3	protein_coding	TLC domain containing 4
chr3	121029413	121065980	-	121029413	121040651	A5SS&ES	0.14	50	50	ENSMUST00000135818.8	ENSMUSG00000028132.16	Tlcd4	chr3	protein_coding	TLC domain containing 4
chr3	121029413	121065980	-	121029413	121056349	5pMXE	0.14	50	50	ENSMUST00000128909.8	ENSMUSG00000028132.16	Tlcd4	chr3	protein_coding	TLC domain containing 4
chr3	121029413	121073767	-	121029413	121056349	5pMXE	0.14	50	50	ENSMUST00000128909.8	ENSMUSG00000028132.16	Tlcd4	chr3	protein_coding	TLC domain containing 4
chr3	121029413	121076549	-	121029413	121056349	5pMXE	0.14	50	50	ENSMUST00000128909.8	ENSMUSG00000028132.16	Tlcd4	chr3	protein_coding	TLC domain containing 4
chr3	121029413	121046334	-	121029413	121056349	A5SS	0.14	50	50	ENSMUST00000128909.8	ENSMUSG00000028132.16	Tlcd4	chr3	protein_coding	TLC domain containing 4
chr3	121029413	121056823	-	121029413	121056349	A5SS	0.14	50	50	ENSMUST00000128909.8	ENSMUSG00000028132.16	Tlcd4	chr3	protein_coding	TLC domain containing 4
chr3	121029413	121065980	-	121029413	121056823	5pMXE	0.14	50	50	ENSMUST00000029777.14	ENSMUSG00000028132.16	Tlcd4	chr3	protein_coding	TLC domain containing 4
chr3	121029413	121073767	-	121029413	121056823	5pMXE	0.14	50	50	ENSMUST00000029777.14	ENSMUSG00000028132.16	Tlcd4	chr3	protein_coding	TLC domain containing 4
chr3	121029413	121076549	-	121029413	121056823	5pMXE	0.14	50	50	ENSMUST00000029777.14	ENSMUSG00000028132.16	Tlcd4	chr3	protein_coding	TLC domain containing 4
chr3	121029413	121046334	-	121029413	121056823	A5SS	0.14	50	50	ENSMUST00000029777.14	ENSMUSG00000028132.16	Tlcd4	chr3	protein_coding	TLC domain containing 4
chr3	121029413	121065980	-	121029413	121046334	5pMXE	0.14	50	50	ENSMUST00000155309.8	ENSMUSG00000028132.16	Tlcd4	chr3	protein_coding	TLC domain containing 4
chr3	121029413	121073767	-	121029413	121046334	5pMXE	0.14	50	50	ENSMUST00000155309.8	ENSMUSG00000028132.16	Tlcd4	chr3	protein_coding	TLC domain containing 4
chr3	121029413	121076549	-	121029413	121046334	5pMXE	0.14	50	50	ENSMUST00000155309.8	ENSMUSG00000028132.16	Tlcd4	chr3	protein_coding	TLC domain containing 4
chr3	121029413;121074101	121073767;121076549	-	121029413	121076549	cassetteExon	0.5	100	100	ENSMUST00000137234.2	ENSMUSG00000028132.16	Tlcd4	chr3	protein_coding	TLC domain containing 4
chr3	121029413	121040651	-	121029413	121076549	A5SS	0.14	50	50	ENSMUST00000137234.2	ENSMUSG00000028132.16	Tlcd4	chr3	protein_coding	TLC domain containing 4
chr3	121029413	121065980	-	121029413	121076549	A5SS	0.14	50	50	ENSMUST00000137234.2	ENSMUSG00000028132.16	Tlcd4	chr3	protein_coding	TLC domain containing 4
chr3	121029413;121066072	121065980;121073767	-	121029413	121073767	cassetteExon	0.5	100	100	ENSMUST00000123427.8	ENSMUSG00000028132.16	Tlcd4	chr3	protein_coding	TLC domain containing 4
chr3	121029413;121040735	121040651;121073990	-	121029413;121073874	121065980;121073990	MXE	0.5	100	100	ENSMUST00000151058.2	ENSMUSG00000028132.16	Tlcd4	chr3	protein_coding	TLC domain containing 4
chr3	121085632	121113729	+	121085632;121092407	121092253;121113729	ES	0.5	50	50	ENSMUST00000039442.12	ENSMUSG00000039887.12	Alg14	chr3	protein_coding	asparagine-linked glycosylation 14
chr3	121085632	121092238	+	121085632	121092253	A3SS	0.33	50	50	ENSMUST00000039442.12	ENSMUSG00000039887.12	Alg14	chr3	protein_coding	asparagine-linked glycosylation 14
chr3	121085632	121113729	+	121085632;121092407	121092238;121113729	ES	0.5	50	50	ENSMUST00000198235.2	ENSMUSG00000039887.12	Alg14	chr3	protein_coding	asparagine-linked glycosylation 14
chr3	121244007	121245532	+	121244007;121245169	121245032;121245532	ES	0.5	50	50	ENSMUST00000029773.13	ENSMUSG00000053931.12	Cnn3	chr3	protein_coding	calponin 3, acidic
chr3	121221136	121243598	+	121220477	121243598	A5SS	0.5	50	50	ENSMUST00000029773.13	ENSMUSG00000053931.12	Cnn3	chr3	protein_coding	calponin 3, acidic
chr3	121244007	121245532	+	121245169	121245532	5pMXE	0.5	50	50	ENSMUST00000196671.2	ENSMUSG00000053931.12	Cnn3	chr3	protein_coding	calponin 3, acidic
chr3	121250861	121251438	+	121250861	121251245	A3SS	0.5	50	50	ENSMUST00000198620.2	ENSMUSG00000053931.12	Cnn3	chr3	protein_coding	calponin 3, acidic
chr3	121253725	121254751	-	121253725	121254495	5pMXE	0.5	50	50	ENSMUST00000198335.2	ENSMUSG00000039865.9	Slc44a3	chr3	protein_coding	solute carrier family 44, member 3
chr3	121316170	121318476	-	121307466	121318476	A3SS	0.5	50	50	ENSMUST00000039197.9	ENSMUSG00000039865.9	Slc44a3	chr3	protein_coding	solute carrier family 44, member 3
chr3	121325589	121325687	+	121325589	121325726	A3SS	0.33	50	50	ENSMUST00000181070.3	ENSMUSG00000097124.3	A530020G20Rik	chr3	lncRNA	RIKEN cDNA A530020G20 gene
chr3	121325589	121326646	+	121325589	121325726	A3SS&ES	0.33	50	50	ENSMUST00000181070.3	ENSMUSG00000097124.3	A530020G20Rik	chr3	lncRNA	RIKEN cDNA A530020G20 gene
chr3	121325589	121326646	+	121325589	121325687	3pMXE	0.33	50	50	ENSMUST00000199889.2	ENSMUSG00000097124.3	A530020G20Rik	chr3	lncRNA	RIKEN cDNA A530020G20 gene
chr3	121433281	121436859	-	121433281	121436855	A5SS	0.5	50	50	ENSMUST00000196621.5	ENSMUSG00000044522.9	A730020M07Rik	chr3	lncRNA	RIKEN cDNA A730020M07 gene
chr3	121525351	121527755	+	121525351;121526189	121526030;121527755	ES	0.5	50	50	ENSMUST00000029771.13	ENSMUSG00000028128.14	F3	chr3	protein_coding	coagulation factor III
chr3	121518731;121521543	121521382;121522986	+	121518731	121522986	cassetteExon	0.5	100	100	ENSMUST00000029771.13	ENSMUSG00000028128.14	F3	chr3	protein_coding	coagulation factor III
chr3	121586551	121608658	-	121586551;121590134	121590098;121608658	ES	0.5	50	50	ENSMUST00000197383.5	ENSMUSG00000028127.11	Abcd3	chr3	protein_coding	ATP-binding cassette, sub-family D (ALD), member 3
chr3	121570715	121573204	-	121567882	121573204	A3SS	0.5	50	50	ENSMUST00000197383.5	ENSMUSG00000028127.11	Abcd3	chr3	protein_coding	ATP-binding cassette, sub-family D (ALD), member 3
chr3	121567882	121569080	-	121567882	121573204	A5SS	0.5	50	50	ENSMUST00000197383.5	ENSMUSG00000028127.11	Abcd3	chr3	protein_coding	ATP-binding cassette, sub-family D (ALD), member 3
chr3	121590134	121608369	-	121590134	121608658	A5SS	0.5	50	50	ENSMUST00000197383.5	ENSMUSG00000028127.11	Abcd3	chr3	protein_coding	ATP-binding cassette, sub-family D (ALD), member 3
chr3	121586551	121608658	-	121590134	121608658	3pMXE	0.5	50	50	ENSMUST00000199593.2	ENSMUSG00000028127.11	Abcd3	chr3	protein_coding	ATP-binding cassette, sub-family D (ALD), member 3
chr3	121747053	121767528	+	121746654	121767528	A5SS	0.33	50	50	ENSMUST00000196984.2	ENSMUSG00000039831.17	Arhgap29	chr3	protein_coding	Rho GTPase activating protein 29
chr3	121761606	121767528	+	121746654	121767528	A5SS	0.33	50	50	ENSMUST00000196984.2	ENSMUSG00000039831.17	Arhgap29	chr3	protein_coding	Rho GTPase activating protein 29
chr3	121747053	121775464	+	121747053;121767764	121767528;121775464	ES	0.33	50	50	ENSMUST00000037958.14	ENSMUSG00000039831.17	Arhgap29	chr3	protein_coding	Rho GTPase activating protein 29
chr3	121796351	121796885	+	121796351	121796858	A3SS	0.5	50	50	ENSMUST00000037958.14	ENSMUSG00000039831.17	Arhgap29	chr3	protein_coding	Rho GTPase activating protein 29
chr3	121761606	121767528	+	121747053	121767528	A5SS	0.33	50	50	ENSMUST00000037958.14	ENSMUSG00000039831.17	Arhgap29	chr3	protein_coding	Rho GTPase activating protein 29
chr3	121761606	121775464	+	121767764	121775464	A5SS&ES	0.33	50	50	ENSMUST00000037958.14	ENSMUSG00000039831.17	Arhgap29	chr3	protein_coding	Rho GTPase activating protein 29
chr3	121761606	121775464	+	121747053	121775464	A5SS	0.33	50	50	ENSMUST00000196904.5	ENSMUSG00000039831.17	Arhgap29	chr3	protein_coding	Rho GTPase activating protein 29
chr3	121761606;121767764	121767528;121775464	+	121761606	121775464	cassetteExon	0.5	100	100	ENSMUST00000196479.5	ENSMUSG00000039831.17	Arhgap29	chr3	protein_coding	Rho GTPase activating protein 29
chr3	121881140	121881377	+	121881140	121896324	A3SS	0.33	50	50	ENSMUST00000013995.13	ENSMUSG00000028125.15	Abca4	chr3	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 4
chr3	121881140	121889750	+	121881140	121896324	A3SS	0.33	50	50	ENSMUST00000013995.13	ENSMUSG00000028125.15	Abca4	chr3	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 4
chr3	121842293	121846551	+	121838261	121846551	A5SS	0.5	50	50	ENSMUST00000013995.13	ENSMUSG00000028125.15	Abca4	chr3	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 4
chr3	121868238	121874557	+	121862811	121874557	A5SS	0.5	50	50	ENSMUST00000013995.13	ENSMUSG00000028125.15	Abca4	chr3	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 4
chr3	121925702	121926173	+	121923049	121926173	A5SS	0.5	50	50	ENSMUST00000013995.13	ENSMUSG00000028125.15	Abca4	chr3	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 4
chr3	121964210	121964391	+	121963676	121964391	A5SS	0.5	50	50	ENSMUST00000013995.13	ENSMUSG00000028125.15	Abca4	chr3	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 4
chr3	121967681	121969723	+	121967677	121969723	A5SS	0.5	50	50	ENSMUST00000013995.13	ENSMUSG00000028125.15	Abca4	chr3	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 4
chr3	121881140	121881377	+	121881140	121889750	A3SS	0.33	50	50	ENSMUST00000132199.8	ENSMUSG00000028125.15	Abca4	chr3	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 4
chr3	122052940	122056249	+	122052940;122055576	122055517;122056249	ES	0.5	50	50	ENSMUST00000029769.14	ENSMUSG00000028124.16	Gclm	chr3	protein_coding	glutamate-cysteine ligase, modifier subunit
chr3	122056451	122059877	+	122056451;122058557	122058443;122059877	ES	0.5	50	50	ENSMUST00000029769.14	ENSMUSG00000028124.16	Gclm	chr3	protein_coding	glutamate-cysteine ligase, modifier subunit
chr3	122049259	122050325	+	122049259	122052856	A3SS	0.5	50	50	ENSMUST00000029769.14	ENSMUSG00000028124.16	Gclm	chr3	protein_coding	glutamate-cysteine ligase, modifier subunit
chr3	122056451	122059877	+	122056451	122058443	3pMXE	0.5	50	50	ENSMUST00000176445.8	ENSMUSG00000028124.16	Gclm	chr3	protein_coding	glutamate-cysteine ligase, modifier subunit
chr3	122052940	122056249	+	122055576	122056249	5pMXE	0.5	50	50	ENSMUST00000176761.3	ENSMUSG00000028124.16	Gclm	chr3	protein_coding	glutamate-cysteine ligase, modifier subunit
chr3	122213832	122220094	+	122129595	122220094	A5SS	0.5	50	50	ENSMUST00000196134.2	ENSMUSG00000028121.9	Bcar3	chr3	protein_coding	breast cancer anti-estrogen resistance 3
chr3	122248741	122265196	+	122248741	122298576	A3SS	0.5	50	50	ENSMUST00000029766.9	ENSMUSG00000028121.9	Bcar3	chr3	protein_coding	breast cancer anti-estrogen resistance 3
chr3	122277641	122298576	+	122248741	122298576	A5SS	0.5	50	50	ENSMUST00000029766.9	ENSMUSG00000028121.9	Bcar3	chr3	protein_coding	breast cancer anti-estrogen resistance 3
chr3	122305914	122306000	+	122304971	122306000	A5SS	0.5	50	50	ENSMUST00000029766.9	ENSMUSG00000028121.9	Bcar3	chr3	protein_coding	breast cancer anti-estrogen resistance 3
chr3	122342914	122350061	-	122342914;122345799	122345785;122350061	ES	0.5	50	50	ENSMUST00000197259.5	ENSMUSG00000039735.17	Fnbp1l	chr3	protein_coding	formin binding protein 1-like
chr3	122342914	122351552	-	122342914;122350219	122350061;122351552	ES	0.5	50	50	ENSMUST00000239148.2	ENSMUSG00000039735.17	Fnbp1l	chr3	protein_coding	formin binding protein 1-like
chr3	122342914	122345785	-	122342914	122351552	A5SS	0.33	50	50	ENSMUST00000162409.8	ENSMUSG00000039735.17	Fnbp1l	chr3	protein_coding	formin binding protein 1-like
chr3	122421217	122423275	-	122416630	122423275	A3SS	0.33	50	50	ENSMUST00000199116.2	ENSMUSG00000106365.2	Gm43568	chr3	lncRNA	predicted gene 43568
chr3	122422490	122423275	-	122416630	122423275	A3SS	0.33	50	50	ENSMUST00000199116.2	ENSMUSG00000106365.2	Gm43568	chr3	lncRNA	predicted gene 43568
chr3	122422490	122423275	-	122421217	122423275	A3SS	0.33	50	50	ENSMUST00000198040.2	ENSMUSG00000106365.2	Gm43568	chr3	lncRNA	predicted gene 43568
chr3	122598258	122600682	+	122598258	122611570	A3SS	0.5	50	50	ENSMUST00000066728.10	ENSMUSG00000053965.11	Pde5a	chr3	protein_coding	phosphodiesterase 5A, cGMP-specific
chr3	122524305	122541538	+	122523016	122541538	A5SS	0.5	50	50	ENSMUST00000066728.10	ENSMUSG00000053965.11	Pde5a	chr3	protein_coding	phosphodiesterase 5A, cGMP-specific
chr3	122588937	122595486	-	122563331	122595486	A3SS	0.33	50	50	ENSMUST00000196290.2	ENSMUSG00000106583.2	4930447N08Rik	chr3	lncRNA	RIKEN cDNA 4930447N08 gene
chr3	122593495	122595486	-	122563331	122595486	A3SS	0.33	50	50	ENSMUST00000196290.2	ENSMUSG00000106583.2	4930447N08Rik	chr3	lncRNA	RIKEN cDNA 4930447N08 gene
chr3	122593495	122595486	-	122588937	122595486	A3SS	0.33	50	50	ENSMUST00000198715.2	ENSMUSG00000106583.2	4930447N08Rik	chr3	lncRNA	RIKEN cDNA 4930447N08 gene
chr3	122588937	122591992	-	122588937	122595486	A5SS	0.5	50	50	ENSMUST00000198715.2	ENSMUSG00000106583.2	4930447N08Rik	chr3	lncRNA	RIKEN cDNA 4930447N08 gene
chr3	122676336	122682917	-	122665081	122682917	A3SS	0.5	50	50	ENSMUST00000180557.6	ENSMUSG00000097852.6	4933405D12Rik	chr3	lncRNA	RIKEN cDNA 4933405D12 gene
chr3	122757996	122777931	-	122757996;122762898	122762238;122777931	ES	0.33	50	50	ENSMUST00000090379.7	ENSMUSG00000039701.12	Usp53	chr3	protein_coding	ubiquitin specific peptidase 53
chr3	122754886;122755290	122755182;122756533	-	122754886;122755081	122754968;122756533	MXE	0.5	100	100	ENSMUST00000090379.7	ENSMUSG00000039701.12	Usp53	chr3	protein_coding	ubiquitin specific peptidase 53
chr3	122762898;122776358	122776334;122777931	-	122762898	122777931	cassetteExon	0.5	100	100	ENSMUST00000090379.7	ENSMUSG00000039701.12	Usp53	chr3	protein_coding	ubiquitin specific peptidase 53
chr3	122755290	122756533	-	122755081	122756533	A3SS	0.5	50	50	ENSMUST00000197934.5	ENSMUSG00000039701.12	Usp53	chr3	protein_coding	ubiquitin specific peptidase 53
chr3	122754886	122755182	-	122754886	122754968	5pMXE	0.5	50	50	ENSMUST00000197801.2	ENSMUSG00000039701.12	Usp53	chr3	protein_coding	ubiquitin specific peptidase 53
chr3	122762898	122777931	-	122757996	122777931	A3SS	0.33	50	50	ENSMUST00000199401.2	ENSMUSG00000039701.12	Usp53	chr3	protein_coding	ubiquitin specific peptidase 53
chr3	122776358	122777931	-	122757996	122777931	A3SS	0.33	50	50	ENSMUST00000199401.2	ENSMUSG00000039701.12	Usp53	chr3	protein_coding	ubiquitin specific peptidase 53
chr3	122757996	122762238	-	122757996	122777931	A5SS	0.5	50	50	ENSMUST00000199401.2	ENSMUSG00000039701.12	Usp53	chr3	protein_coding	ubiquitin specific peptidase 53
chr3	122810327	122827841	-	122810327;122819881	122819712;122827841	ES	0.33	50	50	ENSMUST00000029761.14	ENSMUSG00000028116.14	Myoz2	chr3	protein_coding	myozenin 2
chr3	122819881;122827012	122826841;122827841	-	122819881	122827841	cassetteExon	0.5	100	100	ENSMUST00000029761.14	ENSMUSG00000028116.14	Myoz2	chr3	protein_coding	myozenin 2
chr3	122819881	122827791	-	122819881	122827841	A5SS	0.33	50	50	ENSMUST00000029761.14	ENSMUSG00000028116.14	Myoz2	chr3	protein_coding	myozenin 2
chr3	122819881	122827791	-	122819881	122826841	A5SS&ES	0.33	50	50	ENSMUST00000141588.8	ENSMUSG00000028116.14	Myoz2	chr3	protein_coding	myozenin 2
chr3	122810327	122827841	-	122810327	122819712	A5SS&ES	0.5	50	50	ENSMUST00000143464.6	ENSMUSG00000028116.14	Myoz2	chr3	protein_coding	myozenin 2
chr3	122827012	122827841	-	122810327	122827841	A3SS	0.33	50	50	ENSMUST00000200514.5	ENSMUSG00000028116.14	Myoz2	chr3	protein_coding	myozenin 2
chr3	122810327	122827841	-	122819881	122827841	3pMXE	0.33	50	50	ENSMUST00000140231.3	ENSMUSG00000028116.14	Myoz2	chr3	protein_coding	myozenin 2
chr3	122873907	122906081	-	122873907	122906351	A5SS	0.33	50	50	ENSMUST00000139160.8	ENSMUSG00000050315.15	Synpo2	chr3	protein_coding	synaptopodin 2
chr3	122873907	122906258	-	122873907	122906351	A5SS	0.33	50	50	ENSMUST00000139160.8	ENSMUSG00000050315.15	Synpo2	chr3	protein_coding	synaptopodin 2
chr3	122903073	122906081	-	122873907	122906081	A3SS	0.5	50	50	ENSMUST00000106426.8	ENSMUSG00000050315.15	Synpo2	chr3	protein_coding	synaptopodin 2
chr3	122968645	123029552	-	122914919	123029552	A3SS	0.5	50	50	ENSMUST00000106426.8	ENSMUSG00000050315.15	Synpo2	chr3	protein_coding	synaptopodin 2
chr3	122873907	122906258	-	122873907	122906081	A5SS	0.33	50	50	ENSMUST00000106426.8	ENSMUSG00000050315.15	Synpo2	chr3	protein_coding	synaptopodin 2
chr3	123063402	123067948	+	123063402	123072794	A3SS	0.5	50	50	ENSMUST00000047923.12	ENSMUSG00000039234.12	Sec24d	chr3	protein_coding	Sec24 related gene family, member D (S. cerevisiae)
chr3	123130999	123136690	+	123130259	123136690	A5SS	0.5	50	50	ENSMUST00000047923.12	ENSMUSG00000039234.12	Sec24d	chr3	protein_coding	Sec24 related gene family, member D (S. cerevisiae)
chr3	123136980	123137473	+	123136881	123137473	A5SS	0.5	50	50	ENSMUST00000047923.12	ENSMUSG00000039234.12	Sec24d	chr3	protein_coding	Sec24 related gene family, member D (S. cerevisiae)
chr3	123166322	123168394	-	123166322;123167711	123167619;123168394	ES	0.5	50	50	ENSMUST00000174323.6	ENSMUSG00000028114.17	Mettl14	chr3	protein_coding	methyltransferase like 14
chr3	123346329	123350441	-	123346329	123350485	A5SS	0.5	50	50	ENSMUST00000137404.8	ENSMUSG00000027977.16	Ndst3	chr3	protein_coding	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
chr3	123353945	123369976	-	123353945	123355551	A5SS&ES	0.5	50	50	ENSMUST00000137404.8	ENSMUSG00000027977.16	Ndst3	chr3	protein_coding	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
chr3	123400680	123412732	-	123400680	123421608	A5SS	0.33	50	50	ENSMUST00000137404.8	ENSMUSG00000027977.16	Ndst3	chr3	protein_coding	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
chr3	123466126	123483679	-	123466126	123484354	A5SS	0.5	50	50	ENSMUST00000137404.8	ENSMUSG00000027977.16	Ndst3	chr3	protein_coding	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
chr3	123400680	123464990	-	123400680	123412732	5pMXE	0.33	50	50	ENSMUST00000132112.8	ENSMUSG00000027977.16	Ndst3	chr3	protein_coding	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
chr3	123427989	123464990	-	123400680	123464990	A3SS	0.5	50	50	ENSMUST00000199046.5	ENSMUSG00000027977.16	Ndst3	chr3	protein_coding	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
chr3	123400680	123421608	-	123400680	123464990	A5SS	0.33	50	50	ENSMUST00000199046.5	ENSMUSG00000027977.16	Ndst3	chr3	protein_coding	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
chr3	124213034	124215026	-	124213034;124213583	124213405;124215026	ES	0.5	50	50	ENSMUST00000029598.10	ENSMUSG00000027973.12	1700006A11Rik	chr3	protein_coding	RIKEN cDNA 1700006A11 gene
chr3	124350551	124368969	-	124350595	124368969	A3SS	0.25	50	50	ENSMUST00000180162.8	ENSMUSG00000039174.15	1700003H04Rik	chr3	protein_coding	RIKEN cDNA 1700003H04 gene
chr3	124359847	124372084	-	124369010	124372084	A3SS&ES	0.5	50	50	ENSMUST00000180162.8	ENSMUSG00000039174.15	1700003H04Rik	chr3	protein_coding	RIKEN cDNA 1700003H04 gene
chr3	124366954	124368969	-	124350595	124368969	A3SS	0.25	50	50	ENSMUST00000180162.8	ENSMUSG00000039174.15	1700003H04Rik	chr3	protein_coding	RIKEN cDNA 1700003H04 gene
chr3	124368205	124368969	-	124350595	124368969	A3SS	0.25	50	50	ENSMUST00000180162.8	ENSMUSG00000039174.15	1700003H04Rik	chr3	protein_coding	RIKEN cDNA 1700003H04 gene
chr3	124372165	124373445	-	124372233	124373445	A3SS	0.5	50	50	ENSMUST00000180162.8	ENSMUSG00000039174.15	1700003H04Rik	chr3	protein_coding	RIKEN cDNA 1700003H04 gene
chr3	124366954	124368969	-	124350551	124368969	A3SS	0.25	50	50	ENSMUST00000047110.14	ENSMUSG00000039174.15	1700003H04Rik	chr3	protein_coding	RIKEN cDNA 1700003H04 gene
chr3	124368205	124368969	-	124350551	124368969	A3SS	0.25	50	50	ENSMUST00000047110.14	ENSMUSG00000039174.15	1700003H04Rik	chr3	protein_coding	RIKEN cDNA 1700003H04 gene
chr3	124366954	124368969	-	124366954;124368205	124368111;124368969	ES	0.5	50	50	ENSMUST00000180033.8	ENSMUSG00000039174.15	1700003H04Rik	chr3	protein_coding	RIKEN cDNA 1700003H04 gene
chr3	125508308	125518300	+	125508308;125515851	125515749;125518300	ES	0.5	50	50	ENSMUST00000173932.8	ENSMUSG00000027971.17	Ndst4	chr3	protein_coding	N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4
chr3	125232410	125355070	+	125232410	125355072	A3SS	0.5	50	50	ENSMUST00000173932.8	ENSMUSG00000027971.17	Ndst4	chr3	protein_coding	N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4
chr3	125405282	125405948	+	125405282	125476789	A3SS	0.5	50	50	ENSMUST00000173932.8	ENSMUSG00000027971.17	Ndst4	chr3	protein_coding	N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4
chr3	125476971	125483505	+	125476971	125491554	A3SS	0.5	50	50	ENSMUST00000173932.8	ENSMUSG00000027971.17	Ndst4	chr3	protein_coding	N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4
chr3	125474979	125476789	+	125405282	125476789	A5SS	0.5	50	50	ENSMUST00000173932.8	ENSMUSG00000027971.17	Ndst4	chr3	protein_coding	N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4
chr3	126391047	126392715	+	126390032	126392715	A5SS	0.33	50	50	ENSMUST00000143383.8	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126391153	126392715	+	126390032	126392715	A5SS	0.33	50	50	ENSMUST00000143383.8	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126595410	126601857	+	126595410;126599565	126599506;126601857	ES	0.5	50	50	ENSMUST00000106402.8	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126599565	126604288	+	126599565;126601898	126601857;126604288	ES	0.25	50	50	ENSMUST00000106402.8	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126561228;126565495	126565423;126574009	+	126561228;126564506	126564434;126574009	MXE	0.5	100	100	ENSMUST00000106402.8	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126564506;126573648	126573550;126574009	+	126564506	126574009	cassetteExon	0.5	100	100	ENSMUST00000106402.8	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126564506;126573648	126573594;126574009	+	126564506	126574009	cassetteExon	0.5	100	100	ENSMUST00000106402.8	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126595410;126596618	126596586;126604288	+	126595410;126601898	126599506;126604288	MXE	0.5	100	100	ENSMUST00000106402.8	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126634014;126635222	126635134;126636407	+	126634014	126636407	cassetteExon	0.5	100	100	ENSMUST00000106402.8	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126591929	126595376	+	126591929	126595373	A3SS	0.5	50	50	ENSMUST00000106402.8	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126604336	126609714	+	126604336	126628223	A3SS	0.5	50	50	ENSMUST00000106402.8	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126391047	126392715	+	126391153	126392715	A5SS	0.33	50	50	ENSMUST00000106402.8	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126572542	126574009	+	126564506	126574009	A5SS	0.25	50	50	ENSMUST00000106402.8	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126634059	126636407	+	126634014	126636407	A5SS	0.33	50	50	ENSMUST00000106402.8	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126572542	126574009	+	126565495	126574009	A5SS	0.25	50	50	ENSMUST00000106399.8	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126573648	126574009	+	126565495	126574009	A5SS	0.25	50	50	ENSMUST00000106399.8	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126595410	126604288	+	126595410;126601898	126601857;126604288	ES	0.25	50	50	ENSMUST00000066466.13	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126595410;126596618	126596586;126604288	+	126595410;126601898	126601857;126604288	MXE	0.5	100	100	ENSMUST00000066466.13	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126595410;126599565	126599506;126604288	+	126595410;126601898	126601857;126604288	MXE	0.5	100	100	ENSMUST00000066466.13	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126595410;126596618	126596586;126604288	+	126595410	126604288	cassetteExon	0.5	100	100	ENSMUST00000163226.8	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126595410;126599565	126599506;126604288	+	126595410	126604288	cassetteExon	0.5	100	100	ENSMUST00000163226.8	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126634059	126636407	+	126635222	126636407	A5SS&ES	0.33	50	50	ENSMUST00000199300.5	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126561228;126565495	126565423;126574009	+	126561228;126573648	126564434;126574009	MXE	0.5	100	100	ENSMUST00000134466.8	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126564506	126573550	+	126564506	126573594	A3SS	0.33	50	50	ENSMUST00000134466.8	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126572542	126574009	+	126573648	126574009	A5SS&ES	0.25	50	50	ENSMUST00000134466.8	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126634014	126636407	+	126634014	126635134	3pMXE	0.5	50	50	ENSMUST00000145454.8	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126561228	126565423	+	126561228	126564434	A3SS	0.5	50	50	ENSMUST00000129293.8	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126564506	126574009	+	126565495	126574009	A5SS	0.25	50	50	ENSMUST00000129293.8	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126595410;126599565	126599506;126604288	+	126595410;126596618	126596586;126604288	MXE	0.5	100	100	ENSMUST00000106401.8	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126599565	126604288	+	126599565	126601857	3pMXE	0.5	50	50	ENSMUST00000147043.6	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126595410	126596586	+	126595410	126599506	A3SS	0.33	50	50	ENSMUST00000147043.6	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126595410	126604288	+	126596618	126604288	5pMXE	0.25	50	50	ENSMUST00000066452.14	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126599565	126604288	+	126596618	126604288	A5SS	0.25	50	50	ENSMUST00000066452.14	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126601898	126604288	+	126596618	126604288	A5SS	0.25	50	50	ENSMUST00000066452.14	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126595410	126604288	+	126599565	126604288	5pMXE	0.25	50	50	ENSMUST00000170149.2	ENSMUSG00000053819.17	Camk2d	chr3	protein_coding	calcium/calmodulin-dependent protein kinase II, delta
chr3	126717620	126723371	-	126717620;126722496	126722314;126723371	ES	0.33	50	50	ENSMUST00000044443.15	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126746948	126749519	-	126746948;126748758	126748633;126749519	ES	0.5	50	50	ENSMUST00000044443.15	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126791600	126792526	-	126791600	126791973	5pMXE	0.5	50	50	ENSMUST00000044443.15	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126717620;126720543	126720452;126722314	-	126717620	126722314	cassetteExon	0.5	100	100	ENSMUST00000044443.15	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126717620;126720543	126720452;126723371	-	126717620;126722496	126722314;126723371	MXE	0.5	100	100	ENSMUST00000044443.15	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126723730;126724302	126724210;126726587	-	126723730	126726587	cassetteExon	0.5	100	100	ENSMUST00000044443.15	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126733795;126734221	126734117;126744384	-	126733795	126744384	cassetteExon	0.5	100	100	ENSMUST00000044443.15	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126756054;126757130	126757032;126758587	-	126756054	126758587	cassetteExon	0.5	100	100	ENSMUST00000044443.15	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126758811;126764687	126764652;126769700	-	126758811	126769700	cassetteExon	0.5	100	100	ENSMUST00000044443.15	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126741456	126744384	-	126733795	126744384	A3SS	0.33	50	50	ENSMUST00000044443.15	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126772916	126775449	-	126770596	126775449	A3SS	0.5	50	50	ENSMUST00000044443.15	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126733795	126735259	-	126733795	126744384	A5SS	0.33	50	50	ENSMUST00000044443.15	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126733795	126744384	-	126733795;126741456	126735259;126744384	ES	0.33	50	50	ENSMUST00000182078.9	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126841929	126846337	-	126841929;126845898	126845875;126846337	ES	0.5	50	50	ENSMUST00000182078.9	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	127132841	127292317	-	127132841	127202490	5pMXE	0.33	50	50	ENSMUST00000182078.9	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126733795;126734221	126734117;126744384	-	126733795;126741456	126735259;126744384	MXE	0.5	100	100	ENSMUST00000182078.9	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126804700;126806420	126806322;126806888	-	126804700	126806888	cassetteExon	0.5	100	100	ENSMUST00000182078.9	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126873645;126890546	126890451;126898410	-	126873645	126898410	cassetteExon	0.5	100	100	ENSMUST00000182078.9	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126898511;127041881	127041783;127132781	-	126898511	127132781	cassetteExon	0.5	100	100	ENSMUST00000182078.9	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126819271	126822868	-	126817039	126822868	A3SS	0.5	50	50	ENSMUST00000182078.9	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	127132836	127202490	-	127132841	127202490	A3SS	0.5	50	50	ENSMUST00000182078.9	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126898511	126918156	-	126898511	127132781	A5SS	0.16	50	50	ENSMUST00000182078.9	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126898511	126955328	-	126898511	127132781	A5SS	0.16	50	50	ENSMUST00000182078.9	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126898511	126958832	-	126898511	127132781	A5SS	0.16	50	50	ENSMUST00000182078.9	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126898511	127019413	-	126898511	127132781	A5SS	0.16	50	50	ENSMUST00000182078.9	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	127132841	127202494	-	127132841	127202490	A5SS	0.33	50	50	ENSMUST00000182078.9	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126898511	127041783	-	126898511	127019413	5pMXE	0.14	50	50	ENSMUST00000182064.9	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126898511	127292317	-	126898511	127019413	5pMXE	0.14	50	50	ENSMUST00000182064.9	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126717620;126720543	126720452;126723371	-	126717620	126723371	cassetteExon	0.5	100	100	ENSMUST00000182064.9	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126898511	126918156	-	126898511	127019413	A5SS	0.14	50	50	ENSMUST00000182064.9	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126898511	126955328	-	126898511	127019413	A5SS	0.14	50	50	ENSMUST00000182064.9	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126898511	126958832	-	126898511	127019413	A5SS	0.14	50	50	ENSMUST00000182064.9	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126720543	126723371	-	126720543;126722496	126722314;126723371	ES	0.33	50	50	ENSMUST00000182571.4	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126741456	126744384	-	126734221	126744384	A3SS	0.33	50	50	ENSMUST00000182025.6	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126733795	126735259	-	126733795	126734117	A5SS&ES	0.33	50	50	ENSMUST00000182025.6	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126898511;127132841	127132781;127292317	-	126898511	127292317	cassetteExon	0.5	100	100	ENSMUST00000182711.8	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126898511	126918156	-	126898511	127292317	A5SS	0.14	50	50	ENSMUST00000182711.8	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126898511	126955328	-	126898511	127292317	A5SS	0.14	50	50	ENSMUST00000182711.8	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126898511	126958832	-	126898511	127292317	A5SS	0.14	50	50	ENSMUST00000182711.8	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126898511	127041783	-	126898511	127292317	A5SS	0.14	50	50	ENSMUST00000182711.8	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	127132841	127292317	-	127132841	127202494	5pMXE	0.33	50	50	ENSMUST00000182959.8	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126898511	126918156	-	126898511	127041783	A5SS	0.16	50	50	ENSMUST00000182008.8	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126898511	126955328	-	126898511	127041783	A5SS	0.16	50	50	ENSMUST00000182008.8	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126898511	126958832	-	126898511	127041783	A5SS	0.16	50	50	ENSMUST00000182008.8	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126898511	126958832	-	126898511	126955328	5pMXE	0.14	50	50	ENSMUST00000182994.8	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126898511	126918156	-	126898511	126955328	A5SS	0.14	50	50	ENSMUST00000182994.8	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126898511	126958832	-	126898511	126918156	5pMXE	0.14	50	50	ENSMUST00000238781.2	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126898511	127292317	-	127132841	127292317	3pMXE	0.5	50	50	ENSMUST00000182316.3	ENSMUSG00000032826.20	Ank2	chr3	protein_coding	ankyrin 2, brain
chr3	126955064;126955507	126955438;126959910	+	126955064	126959910	cassetteExon	0.5	100	100	ENSMUST00000180603.8	ENSMUSG00000097456.8	Gm16958	chr3	lncRNA	predicted gene, 16958
chr3	127341195	127346828	-	127341195	127346832	A5SS	0.5	50	50	ENSMUST00000029588.10	ENSMUSG00000027968.12	Larp7	chr3	protein_coding	La ribonucleoprotein domain family, member 7
chr3	127377819	127379668	+	127377819;127378443	127378305;127379668	ES	0.5	50	50	ENSMUST00000200490.5	ENSMUSG00000051278.13	Zgrf1	chr3	protein_coding	zinc finger, GRF-type containing 1
chr3	127366974;127375218	127375095;127377233	+	127366974	127377233	cassetteExon	0.5	100	100	ENSMUST00000200490.5	ENSMUSG00000051278.13	Zgrf1	chr3	protein_coding	zinc finger, GRF-type containing 1
chr3	127383757	127388109	+	127383757	127389528	A3SS	0.5	50	50	ENSMUST00000200490.5	ENSMUSG00000051278.13	Zgrf1	chr3	protein_coding	zinc finger, GRF-type containing 1
chr3	127347201	127348945	+	127347304	127348945	A5SS	0.5	50	50	ENSMUST00000200490.5	ENSMUSG00000051278.13	Zgrf1	chr3	protein_coding	zinc finger, GRF-type containing 1
chr3	127402281	127405433	+	127402517	127405433	A5SS	0.5	50	50	ENSMUST00000200490.5	ENSMUSG00000051278.13	Zgrf1	chr3	protein_coding	zinc finger, GRF-type containing 1
chr3	127402281	127406992	+	127405560	127406992	A5SS&ES	0.5	50	50	ENSMUST00000200490.5	ENSMUSG00000051278.13	Zgrf1	chr3	protein_coding	zinc finger, GRF-type containing 1
chr3	127402281	127406992	+	127402281;127405560	127405433;127406992	ES	0.5	50	50	ENSMUST00000043108.9	ENSMUSG00000051278.13	Zgrf1	chr3	protein_coding	zinc finger, GRF-type containing 1
chr3	127548669	127573810	-	127523150	127573810	A3SS	0.5	50	50	ENSMUST00000029662.12	ENSMUSG00000028028.12	Alpk1	chr3	protein_coding	alpha-kinase 1
chr3	127583820	127590218	+	127583820;127585178	127585122;127590218	ES	0.5	50	50	ENSMUST00000054483.14	ENSMUSG00000046688.15	Tifa	chr3	protein_coding	TRAF-interacting protein with forkhead-associated domain
chr3	127584398	127585122	+	127583820	127585122	A5SS	0.5	50	50	ENSMUST00000054483.14	ENSMUSG00000046688.15	Tifa	chr3	protein_coding	TRAF-interacting protein with forkhead-associated domain
chr3	127583820	127585122	+	127583820	127613073	A3SS	0.33	50	50	ENSMUST00000166778.3	ENSMUSG00000046688.15	Tifa	chr3	protein_coding	TRAF-interacting protein with forkhead-associated domain
chr3	127583820	127590218	+	127583820	127613073	A3SS	0.33	50	50	ENSMUST00000166778.3	ENSMUSG00000046688.15	Tifa	chr3	protein_coding	TRAF-interacting protein with forkhead-associated domain
chr3	127583820	127590218	+	127585178	127590218	5pMXE	0.5	50	50	ENSMUST00000171621.3	ENSMUSG00000046688.15	Tifa	chr3	protein_coding	TRAF-interacting protein with forkhead-associated domain
chr3	127606944;127609343	127609245;127610559	-	127606944	127610559	cassetteExon	0.5	100	100	ENSMUST00000200409.5	ENSMUSG00000074238.7	Ap1ar	chr3	protein_coding	adaptor-related protein complex 1 associated regulatory protein
chr3	127616962;127628543	127628513;127630798	-	127616962	127630798	cassetteExon	0.5	100	100	ENSMUST00000200409.5	ENSMUSG00000074238.7	Ap1ar	chr3	protein_coding	adaptor-related protein complex 1 associated regulatory protein
chr3	127606944	127610559	-	127609343	127610559	3pMXE	0.5	50	50	ENSMUST00000197744.2	ENSMUSG00000074238.7	Ap1ar	chr3	protein_coding	adaptor-related protein complex 1 associated regulatory protein
chr3	127664649;127681634	127681604;127689683	-	127664649	127689683	cassetteExon	0.5	100	100	ENSMUST00000199273.2	ENSMUSG00000050549.9	Fam241a	chr3	protein_coding	family with sequence similarity 241, member A
chr3	127943546;127979848	127979738;128024967	-	127943546;128005255	128005168;128024967	MXE	0.5	100	100	ENSMUST00000197413.5	ENSMUSG00000105816.5	D030025E07Rik	chr3	lncRNA	RIKEN cDNA D030025E07 gene
chr3	127987768	128005168	-	127943546	128005168	A3SS	0.5	50	50	ENSMUST00000197413.5	ENSMUSG00000105816.5	D030025E07Rik	chr3	lncRNA	RIKEN cDNA D030025E07 gene
chr3	127918374	127926896	-	127918374	127943432	A5SS	0.5	50	50	ENSMUST00000197413.5	ENSMUSG00000105816.5	D030025E07Rik	chr3	lncRNA	RIKEN cDNA D030025E07 gene
chr3	128997641	129009288	+	128997641;128998226	128998089;129009288	ES	0.33	50	50	ENSMUST00000174661.9	ENSMUSG00000028023.17	Pitx2	chr3	protein_coding	paired-like homeodomain transcription factor 2
chr3	128998226	129011983	+	128998226;129009493	129009288;129011983	ES	0.5	50	50	ENSMUST00000174661.9	ENSMUSG00000028023.17	Pitx2	chr3	protein_coding	paired-like homeodomain transcription factor 2
chr3	128993811;128997509	128997364;128997586	+	128993811	128997586	cassetteExon	0.5	100	100	ENSMUST00000174661.9	ENSMUSG00000028023.17	Pitx2	chr3	protein_coding	paired-like homeodomain transcription factor 2
chr3	128997641	128998128	+	128997641	128998089	A3SS	0.33	50	50	ENSMUST00000174661.9	ENSMUSG00000028023.17	Pitx2	chr3	protein_coding	paired-like homeodomain transcription factor 2
chr3	129008430	129009288	+	128998226	129009288	A5SS	0.33	50	50	ENSMUST00000174661.9	ENSMUSG00000028023.17	Pitx2	chr3	protein_coding	paired-like homeodomain transcription factor 2
chr3	128997641;129009493	129009288;129011983	+	128997641;128998226	128998089;129011983	MXE	0.5	100	100	ENSMUST00000029657.16	ENSMUSG00000028023.17	Pitx2	chr3	protein_coding	paired-like homeodomain transcription factor 2
chr3	128997641;128998226	128998128;129009288	+	128997641	129009288	cassetteExon	0.5	100	100	ENSMUST00000106382.11	ENSMUSG00000028023.17	Pitx2	chr3	protein_coding	paired-like homeodomain transcription factor 2
chr3	128997641;128998226	128998128;129011983	+	128997641;129009493	129009288;129011983	MXE	0.5	100	100	ENSMUST00000106382.11	ENSMUSG00000028023.17	Pitx2	chr3	protein_coding	paired-like homeodomain transcription factor 2
chr3	129008430	129009288	+	128997641	129009288	A5SS	0.33	50	50	ENSMUST00000106382.11	ENSMUSG00000028023.17	Pitx2	chr3	protein_coding	paired-like homeodomain transcription factor 2
chr3	128997641	129009288	+	128997641	128998089	3pMXE	0.33	50	50	ENSMUST00000173645.4	ENSMUSG00000028023.17	Pitx2	chr3	protein_coding	paired-like homeodomain transcription factor 2
chr3	129077832	129092479	-	129077832;129086934	129086855;129092479	ES	0.5	50	50	ENSMUST00000029658.14	ENSMUSG00000028024.15	Enpep	chr3	protein_coding	glutamyl aminopeptidase
chr3	129074242	129077699	-	129074242	129074334	5pMXE	0.5	50	50	ENSMUST00000164443.2	ENSMUSG00000028024.15	Enpep	chr3	protein_coding	glutamyl aminopeptidase
chr3	129077572	129077699	-	129074242	129077699	A3SS	0.5	50	50	ENSMUST00000169240.2	ENSMUSG00000028024.15	Enpep	chr3	protein_coding	glutamyl aminopeptidase
chr3	129324813	129325906	-	129324813	129325558	5pMXE	0.5	50	50	ENSMUST00000197370.5	ENSMUSG00000105837.5	Gm35986	chr3	lncRNA	predicted gene, 35986
chr3	129398821	129426709	+	129398821;129422083	129421932;129426709	ES	0.5	50	50	ENSMUST00000199910.5	ENSMUSG00000041220.11	Elovl6	chr3	protein_coding	ELOVL family member 6, elongation of long chain fatty acids (yeast)
chr3	129326417;129342569	129342477;129398690	+	129326417	129398690	cassetteExon	0.5	100	100	ENSMUST00000199910.5	ENSMUSG00000041220.11	Elovl6	chr3	protein_coding	ELOVL family member 6, elongation of long chain fatty acids (yeast)
chr3	129346232	129398690	+	129326417	129398690	A5SS	0.33	50	50	ENSMUST00000199910.5	ENSMUSG00000041220.11	Elovl6	chr3	protein_coding	ELOVL family member 6, elongation of long chain fatty acids (yeast)
chr3	129346232	129398690	+	129342569	129398690	A5SS	0.33	50	50	ENSMUST00000197235.5	ENSMUSG00000041220.11	Elovl6	chr3	protein_coding	ELOVL family member 6, elongation of long chain fatty acids (yeast)
chr3	129398821	129426709	+	129398821	129421932	3pMXE	0.5	50	50	ENSMUST00000198369.2	ENSMUSG00000041220.11	Elovl6	chr3	protein_coding	ELOVL family member 6, elongation of long chain fatty acids (yeast)
chr3	129484564	129490440	-	129484564;129486689	129486567;129490440	ES	0.5	50	50	ENSMUST00000029653.7	ENSMUSG00000028017.8	Egf	chr3	protein_coding	epidermal growth factor
chr3	129499899	129500925	-	129499899	129500858	A5SS	0.5	50	50	ENSMUST00000029653.7	ENSMUSG00000028017.8	Egf	chr3	protein_coding	epidermal growth factor
chr3	129517041	129518703	-	129517041	129518764	A5SS	0.5	50	50	ENSMUST00000029653.7	ENSMUSG00000028017.8	Egf	chr3	protein_coding	epidermal growth factor
chr3	129484564	129490440	-	129484564	129486567	5pMXE	0.5	50	50	ENSMUST00000199209.2	ENSMUSG00000028017.8	Egf	chr3	protein_coding	epidermal growth factor
chr3	129582727	129584862	-	129583090	129584862	A3SS	0.5	50	50	ENSMUST00000185462.7	ENSMUSG00000093865.8	Lrit3	chr3	protein_coding	leucine-rich repeat, immunoglobulin-like and transmembrane domains 3
chr3	129606998;129609015	129608890;129609209	-	129606998	129609209	cassetteExon	0.5	100	100	ENSMUST00000196317.5	ENSMUSG00000028012.16	Rrh	chr3	protein_coding	retinal pigment epithelium derived rhodopsin homolog
chr3	129605428;129609399	129609209;129616026	-	129605428;129606410	129606257;129616026	MXE	0.5	100	100	ENSMUST00000200079.5	ENSMUSG00000028012.16	Rrh	chr3	protein_coding	retinal pigment epithelium derived rhodopsin homolog
chr3	129606410	129606899	-	129606410	129616026	A5SS	0.5	50	50	ENSMUST00000200079.5	ENSMUSG00000028012.16	Rrh	chr3	protein_coding	retinal pigment epithelium derived rhodopsin homolog
chr3	129606998	129609209	-	129605428	129609209	A3SS	0.33	50	50	ENSMUST00000197535.2	ENSMUSG00000028012.16	Rrh	chr3	protein_coding	retinal pigment epithelium derived rhodopsin homolog
chr3	129609015	129609209	-	129605428	129609209	A3SS	0.33	50	50	ENSMUST00000197535.2	ENSMUSG00000028012.16	Rrh	chr3	protein_coding	retinal pigment epithelium derived rhodopsin homolog
chr3	129606410	129616026	-	129609399	129616026	3pMXE	0.5	50	50	ENSMUST00000197295.2	ENSMUSG00000028012.16	Rrh	chr3	protein_coding	retinal pigment epithelium derived rhodopsin homolog
chr3	129618858	129620488	-	129618858	129619197	A5SS&ES	0.5	50	50	ENSMUST00000029643.15	ENSMUSG00000028010.17	Gar1	chr3	protein_coding	GAR1 ribonucleoprotein
chr3	129624502	129624767	-	129620623	129624767	A3SS	0.5	50	50	ENSMUST00000128441.2	ENSMUSG00000028010.17	Gar1	chr3	protein_coding	GAR1 ribonucleoprotein
chr3	129620623	129622554	-	129620623	129624767	A5SS	0.5	50	50	ENSMUST00000128441.2	ENSMUSG00000028010.17	Gar1	chr3	protein_coding	GAR1 ribonucleoprotein
chr3	129684082;129687465	129687308;129688487	+	129684082	129688487	cassetteExon	0.5	100	100	ENSMUST00000029629.15	ENSMUSG00000027999.16	Pla2g12a	chr3	protein_coding	phospholipase A2, group XIIA
chr3	129674945	129682530	+	129672584	129682530	A5SS	0.5	50	50	ENSMUST00000029629.15	ENSMUSG00000027999.16	Pla2g12a	chr3	protein_coding	phospholipase A2, group XIIA
chr3	129700126	129702235	+	129700126	129704172	A3SS	0.5	50	50	ENSMUST00000029626.9	ENSMUSG00000027997.10	Casp6	chr3	protein_coding	caspase 6
chr3	129710791	129720014	-	129710791;129712395	129712235;129720014	ES	0.5	50	50	ENSMUST00000029624.15	ENSMUSG00000027994.15	Mcub	chr3	protein_coding	mitochondrial calcium uniporter dominant negative beta subunit
chr3	129720118	129728274	-	129720118;129727402	129727232;129728274	ES	0.5	50	50	ENSMUST00000029624.15	ENSMUSG00000027994.15	Mcub	chr3	protein_coding	mitochondrial calcium uniporter dominant negative beta subunit
chr3	129727402	129763599	-	129727402;129728349	129728274;129763599	ES	0.5	50	50	ENSMUST00000029624.15	ENSMUSG00000027994.15	Mcub	chr3	protein_coding	mitochondrial calcium uniporter dominant negative beta subunit
chr3	129720118;129727402	129727232;129763599	-	129720118;129728349	129728274;129763599	MXE	0.5	100	100	ENSMUST00000146340.2	ENSMUSG00000027994.15	Mcub	chr3	protein_coding	mitochondrial calcium uniporter dominant negative beta subunit
chr3	129805521	129827480	-	129805521;129814291	129814187;129827480	ES	0.33	50	50	ENSMUST00000001079.15	ENSMUSG00000001052.16	Sec24b	chr3	protein_coding	Sec24 related gene family, member B (S. cerevisiae)
chr3	129835096	129855089	-	129835096	129854218	5pMXE	0.5	50	50	ENSMUST00000001079.15	ENSMUSG00000001052.16	Sec24b	chr3	protein_coding	Sec24 related gene family, member B (S. cerevisiae)
chr3	129805521;129824306	129824181;129827480	-	129805521;129814291	129814187;129827480	MXE	0.5	100	100	ENSMUST00000001079.15	ENSMUSG00000001052.16	Sec24b	chr3	protein_coding	Sec24 related gene family, member B (S. cerevisiae)
chr3	129805521;129824306	129824181;129827480	-	129805521	129827480	cassetteExon	0.5	100	100	ENSMUST00000165873.8	ENSMUSG00000001052.16	Sec24b	chr3	protein_coding	Sec24 related gene family, member B (S. cerevisiae)
chr3	129805521	129827480	-	129805521	129824181	5pMXE	0.33	50	50	ENSMUST00000168908.2	ENSMUSG00000001052.16	Sec24b	chr3	protein_coding	Sec24 related gene family, member B (S. cerevisiae)
chr3	129805521	129814187	-	129805521	129824181	A5SS	0.33	50	50	ENSMUST00000168908.2	ENSMUSG00000001052.16	Sec24b	chr3	protein_coding	Sec24 related gene family, member B (S. cerevisiae)
chr3	129975429	129976414	+	129940360	129976414	A5SS	0.5	50	50	ENSMUST00000197950.2	ENSMUSG00000058897.19	Col25a1	chr3	protein_coding	collagen, type XXV, alpha 1
chr3	130311386	130316082	+	130311386;130313452	130313426;130316082	ES	0.5	50	50	ENSMUST00000143830.3	ENSMUSG00000058897.19	Col25a1	chr3	protein_coding	collagen, type XXV, alpha 1
chr3	130323781	130340009	+	130323781;130329124	130329080;130340009	ES	0.5	50	50	ENSMUST00000143830.3	ENSMUSG00000058897.19	Col25a1	chr3	protein_coding	collagen, type XXV, alpha 1
chr3	130232988;130269313	130269242;130270018	+	130232988;130268516	130268457;130270018	MXE	0.5	100	100	ENSMUST00000143830.3	ENSMUSG00000058897.19	Col25a1	chr3	protein_coding	collagen, type XXV, alpha 1
chr3	130376972	130379332	+	130376972;130378375	130378349;130379332	ES	0.5	50	50	ENSMUST00000080335.11	ENSMUSG00000058897.19	Col25a1	chr3	protein_coding	collagen, type XXV, alpha 1
chr3	130385481	130389306	+	130385481	130388749	3pMXE	0.5	50	50	ENSMUST00000080335.11	ENSMUSG00000058897.19	Col25a1	chr3	protein_coding	collagen, type XXV, alpha 1
chr3	130363984;130366686	130366606;130369024	+	130363984	130369024	cassetteExon	0.5	100	100	ENSMUST00000080335.11	ENSMUSG00000058897.19	Col25a1	chr3	protein_coding	collagen, type XXV, alpha 1
chr3	130379385;130383146	130383060;130383609	+	130379385	130383609	cassetteExon	0.5	100	100	ENSMUST00000080335.11	ENSMUSG00000058897.19	Col25a1	chr3	protein_coding	collagen, type XXV, alpha 1
chr3	130379385;130383146	130383060;130385443	+	130379385;130383686	130383609;130385443	MXE	0.5	100	100	ENSMUST00000080335.11	ENSMUSG00000058897.19	Col25a1	chr3	protein_coding	collagen, type XXV, alpha 1
chr3	130360144	130361226	+	130360188	130361226	A5SS	0.5	50	50	ENSMUST00000080335.11	ENSMUSG00000058897.19	Col25a1	chr3	protein_coding	collagen, type XXV, alpha 1
chr3	130383146;130383686	130383609;130385443	+	130383146	130385443	cassetteExon	0.5	100	100	ENSMUST00000183368.8	ENSMUSG00000058897.19	Col25a1	chr3	protein_coding	collagen, type XXV, alpha 1
chr3	130414077	130414300	+	130414077	130414282	A3SS	0.5	50	50	ENSMUST00000166187.8	ENSMUSG00000019232.15	Etnppl	chr3	protein_coding	ethanolamine phosphate phospholyase
chr3	130522951	130523838	-	130522951	130523770	A5SS	0.33	50	50	ENSMUST00000062601.14	ENSMUSG00000062006.13	Rpl34	chr3	protein_coding	ribosomal protein L34
chr3	130522951	130523967	-	130522951	130523770	A5SS	0.33	50	50	ENSMUST00000062601.14	ENSMUSG00000062006.13	Rpl34	chr3	protein_coding	ribosomal protein L34
chr3	130522951	130523838	-	130522951	130523967	A5SS	0.33	50	50	ENSMUST00000079085.11	ENSMUSG00000062006.13	Rpl34	chr3	protein_coding	ribosomal protein L34
chr3	130983074	130986778	+	130983074;130984755	130984672;130986778	ES	0.5	50	50	ENSMUST00000029611.14	ENSMUSG00000027985.15	Lef1	chr3	protein_coding	lymphoid enhancer binding factor 1
chr3	130997953	131016725	+	130997953;130998622	130998582;131016725	ES	0.5	50	50	ENSMUST00000029611.14	ENSMUSG00000027985.15	Lef1	chr3	protein_coding	lymphoid enhancer binding factor 1
chr3	130909195;130950224	130950133;130978292	+	130909195	130978292	cassetteExon	0.5	100	100	ENSMUST00000029611.14	ENSMUSG00000027985.15	Lef1	chr3	protein_coding	lymphoid enhancer binding factor 1
chr3	130906469	130907505	+	130905327	130907505	A5SS	0.5	50	50	ENSMUST00000029611.14	ENSMUSG00000027985.15	Lef1	chr3	protein_coding	lymphoid enhancer binding factor 1
chr3	131088704	131089037	-	131087333	131089037	A3SS	0.5	50	50	ENSMUST00000106337.7	ENSMUSG00000027983.14	Cyp2u1	chr3	protein_coding	cytochrome P450, family 2, subfamily u, polypeptide 1
chr3	131136109	131196169	-	131136109	131138239	5pMXE	0.25	50	50	ENSMUST00000090246.5	ENSMUSG00000050931.8	Sgms2	chr3	protein_coding	sphingomyelin synthase 2
chr3	131136109	131196891	-	131136109	131138239	5pMXE	0.25	50	50	ENSMUST00000090246.5	ENSMUSG00000050931.8	Sgms2	chr3	protein_coding	sphingomyelin synthase 2
chr3	131136109;131137148	131137084;131138239	-	131136109	131138239	cassetteExon	0.5	100	100	ENSMUST00000090246.5	ENSMUSG00000050931.8	Sgms2	chr3	protein_coding	sphingomyelin synthase 2
chr3	131136109	131196891	-	131136109	131196169	5pMXE	0.25	50	50	ENSMUST00000197057.2	ENSMUSG00000050931.8	Sgms2	chr3	protein_coding	sphingomyelin synthase 2
chr3	131136109	131137084	-	131136109	131196169	A5SS	0.25	50	50	ENSMUST00000197057.2	ENSMUSG00000050931.8	Sgms2	chr3	protein_coding	sphingomyelin synthase 2
chr3	131136109	131137084	-	131136109	131196891	A5SS	0.25	50	50	ENSMUST00000200431.2	ENSMUSG00000050931.8	Sgms2	chr3	protein_coding	sphingomyelin synthase 2
chr3	131270744;131273439	131273263;131285072	+	131270744	131285072	cassetteExon	0.5	100	100	ENSMUST00000029666.14	ENSMUSG00000028032.14	Papss1	chr3	protein_coding	3'-phosphoadenosine 5'-phosphosulfate synthase 1
chr3	131285186;131287753	131287643;131288142	+	131285186	131288142	cassetteExon	0.5	100	100	ENSMUST00000029666.14	ENSMUSG00000028032.14	Papss1	chr3	protein_coding	3'-phosphoadenosine 5'-phosphosulfate synthase 1
chr3	131270744	131271353	+	131270744	131285072	A3SS	0.25	50	50	ENSMUST00000029666.14	ENSMUSG00000028032.14	Papss1	chr3	protein_coding	3'-phosphoadenosine 5'-phosphosulfate synthase 1
chr3	131270744	131271709	+	131270744	131285072	A3SS	0.25	50	50	ENSMUST00000029666.14	ENSMUSG00000028032.14	Papss1	chr3	protein_coding	3'-phosphoadenosine 5'-phosphosulfate synthase 1
chr3	131270744;131271821	131271353;131273263	+	131270744	131273263	cassetteExon	0.5	100	100	ENSMUST00000197402.5	ENSMUSG00000028032.14	Papss1	chr3	protein_coding	3'-phosphoadenosine 5'-phosphosulfate synthase 1
chr3	131270744;131271821	131271709;131273263	+	131270744	131273263	cassetteExon	0.5	100	100	ENSMUST00000197402.5	ENSMUSG00000028032.14	Papss1	chr3	protein_coding	3'-phosphoadenosine 5'-phosphosulfate synthase 1
chr3	131270744;131271404	131271353;131271709	+	131270744	131271709	cassetteExon	0.5	100	100	ENSMUST00000196408.5	ENSMUSG00000028032.14	Papss1	chr3	protein_coding	3'-phosphoadenosine 5'-phosphosulfate synthase 1
chr3	132335669	132340533	+	132335669	132340484	A3SS	0.5	50	50	ENSMUST00000212804.2	ENSMUSG00000091721.5	Gimd1	chr3	protein_coding	GIMAP family P-loop NTPase domain containing 1
chr3	132335834	132340484	+	132335669	132340484	A5SS	0.33	50	50	ENSMUST00000212804.2	ENSMUSG00000091721.5	Gimd1	chr3	protein_coding	GIMAP family P-loop NTPase domain containing 1
chr3	132335989	132340484	+	132335669	132340484	A5SS	0.33	50	50	ENSMUST00000212804.2	ENSMUSG00000091721.5	Gimd1	chr3	protein_coding	GIMAP family P-loop NTPase domain containing 1
chr3	132340698	132350132	+	132340878	132350132	A5SS	0.5	50	50	ENSMUST00000212804.2	ENSMUSG00000091721.5	Gimd1	chr3	protein_coding	GIMAP family P-loop NTPase domain containing 1
chr3	132335989	132340484	+	132335834	132340484	A5SS	0.33	50	50	ENSMUST00000212594.2	ENSMUSG00000091721.5	Gimd1	chr3	protein_coding	GIMAP family P-loop NTPase domain containing 1
chr3	132382899	132389969	-	132382899	132389790	5pMXE	0.2	50	50	ENSMUST00000198513.6	ENSMUSG00000028029.12	Aimp1	chr3	protein_coding	aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
chr3	132382899	132389228	-	132382899	132389790	A5SS	0.2	50	50	ENSMUST00000198513.6	ENSMUSG00000028029.12	Aimp1	chr3	protein_coding	aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
chr3	132382899	132389554	-	132382899	132389790	A5SS	0.2	50	50	ENSMUST00000198513.6	ENSMUSG00000028029.12	Aimp1	chr3	protein_coding	aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
chr3	132382899	132389801	-	132382899	132389790	A5SS	0.2	50	50	ENSMUST00000198513.6	ENSMUSG00000028029.12	Aimp1	chr3	protein_coding	aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
chr3	132382899	132389801	-	132382899	132389554	5pMXE	0.2	50	50	ENSMUST00000029663.11	ENSMUSG00000028029.12	Aimp1	chr3	protein_coding	aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
chr3	132382899	132389969	-	132382899	132389554	5pMXE	0.2	50	50	ENSMUST00000029663.11	ENSMUSG00000028029.12	Aimp1	chr3	protein_coding	aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
chr3	132382899;132389351	132389228;132389554	-	132382899	132389554	cassetteExon	0.5	100	100	ENSMUST00000029663.11	ENSMUSG00000028029.12	Aimp1	chr3	protein_coding	aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
chr3	132382899	132389228	-	132382899	132389969	A5SS	0.2	50	50	ENSMUST00000197793.5	ENSMUSG00000028029.12	Aimp1	chr3	protein_coding	aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
chr3	132382899	132389801	-	132382899	132389969	A5SS	0.2	50	50	ENSMUST00000197793.5	ENSMUSG00000028029.12	Aimp1	chr3	protein_coding	aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
chr3	132382899	132389228	-	132382899	132389801	A5SS	0.2	50	50	ENSMUST00000196963.2	ENSMUSG00000028029.12	Aimp1	chr3	protein_coding	aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
chr3	132480357	132501884	+	132480357	132507265	A3SS	0.5	50	50	ENSMUST00000169172.5	ENSMUSG00000028030.13	Tbck	chr3	protein_coding	TBC1 domain containing kinase
chr3	132492833	132507265	+	132480357	132507265	A5SS	0.5	50	50	ENSMUST00000169172.5	ENSMUSG00000028030.13	Tbck	chr3	protein_coding	TBC1 domain containing kinase
chr3	132596623	132610419	-	132596623;132597249	132597163;132610419	ES	0.5	50	50	ENSMUST00000042744.16	ENSMUSG00000040998.19	Npnt	chr3	protein_coding	nephronectin
chr3	132615776;132620226	132620134;132623222	-	132615776	132623222	cassetteExon	0.5	100	100	ENSMUST00000042744.16	ENSMUSG00000040998.19	Npnt	chr3	protein_coding	nephronectin
chr3	132623314;132637393	132637343;132653808	-	132623314	132653808	cassetteExon	0.5	100	100	ENSMUST00000042744.16	ENSMUSG00000040998.19	Npnt	chr3	protein_coding	nephronectin
chr3	132653908	132655539	-	132653908	132655734	A5SS	0.5	50	50	ENSMUST00000042744.16	ENSMUSG00000040998.19	Npnt	chr3	protein_coding	nephronectin
chr3	132596623	132610419	-	132597249	132610419	3pMXE	0.5	50	50	ENSMUST00000132732.2	ENSMUSG00000040998.19	Npnt	chr3	protein_coding	nephronectin
chr3	132790786	132797638	-	132790786	132797341	5pMXE	0.5	50	50	ENSMUST00000029651.11	ENSMUSG00000028018.16	Gstcd	chr3	protein_coding	glutathione S-transferase, C-terminal domain containing
chr3	132704719;132708393	132708269;132709425	-	132704719	132709425	cassetteExon	0.5	100	100	ENSMUST00000029651.11	ENSMUSG00000028018.16	Gstcd	chr3	protein_coding	glutathione S-transferase, C-terminal domain containing
chr3	132879039	132882132	-	132866627	132882132	A3SS	0.5	50	50	ENSMUST00000147041.10	ENSMUSG00000040969.15	Arhgef38	chr3	protein_coding	Rho guanine nucleotide exchange factor (GEF) 38
chr3	133082349	133083611	+	133082349	133083608	A3SS	0.5	50	50	ENSMUST00000029644.16	ENSMUSG00000028013.17	Ppa2	chr3	protein_coding	pyrophosphatase (inorganic) 2
chr3	133016485	133026697	+	133016042	133026697	A5SS	0.5	50	50	ENSMUST00000029644.16	ENSMUSG00000028013.17	Ppa2	chr3	protein_coding	pyrophosphatase (inorganic) 2
chr3	133044812	133045024	+	133036273	133045024	A5SS	0.5	50	50	ENSMUST00000029644.16	ENSMUSG00000028013.17	Ppa2	chr3	protein_coding	pyrophosphatase (inorganic) 2
chr3	133045696	133053825	+	133045110	133053825	A5SS	0.5	50	50	ENSMUST00000029644.16	ENSMUSG00000028013.17	Ppa2	chr3	protein_coding	pyrophosphatase (inorganic) 2
chr3	133082402	133083608	+	133082349	133083608	A5SS	0.5	50	50	ENSMUST00000029644.16	ENSMUSG00000028013.17	Ppa2	chr3	protein_coding	pyrophosphatase (inorganic) 2
chr3	133219934	133250806	-	133219934	133249961	5pMXE	0.5	50	50	ENSMUST00000098603.8	ENSMUSG00000040943.13	Tet2	chr3	protein_coding	tet methylcytosine dioxygenase 2
chr3	133182396;133185126	133185103;133185894	-	133182396	133185894	cassetteExon	0.5	100	100	ENSMUST00000098603.8	ENSMUSG00000040943.13	Tet2	chr3	protein_coding	tet methylcytosine dioxygenase 2
chr3	133173583	133179357	-	133177238	133179357	A3SS&ES	0.5	50	50	ENSMUST00000098603.8	ENSMUSG00000040943.13	Tet2	chr3	protein_coding	tet methylcytosine dioxygenase 2
chr3	133175528	133177101	-	133175400	133177101	A3SS	0.5	50	50	ENSMUST00000098603.8	ENSMUSG00000040943.13	Tet2	chr3	protein_coding	tet methylcytosine dioxygenase 2
chr3	133219695	133219790	-	133194478	133219790	A3SS	0.5	50	50	ENSMUST00000098603.8	ENSMUSG00000040943.13	Tet2	chr3	protein_coding	tet methylcytosine dioxygenase 2
chr3	133244919	133249961	-	133219934	133249961	A3SS	0.5	50	50	ENSMUST00000098603.8	ENSMUSG00000040943.13	Tet2	chr3	protein_coding	tet methylcytosine dioxygenase 2
chr3	133665211	133807769	-	133538998	133807769	A3SS	0.5	50	50	ENSMUST00000200444.2	ENSMUSG00000097911.3	Gm26691	chr3	lncRNA	predicted gene, 26691
chr3	133862644	133946160	-	133807877	133946160	A3SS	0.5	50	50	ENSMUST00000181952.2	ENSMUSG00000097911.3	Gm26691	chr3	lncRNA	predicted gene, 26691
chr3	133906062;133915055	133914882;133917433	+	133906062	133917433	cassetteExon	0.5	100	100	ENSMUST00000197430.2	ENSMUSG00000106139.2	Gm30648	chr3	lncRNA	predicted gene, 30648
chr3	133942648	133945164	+	133942648	133963814	A3SS	0.5	50	50	ENSMUST00000197151.5	ENSMUSG00000044365.16	Cxxc4	chr3	protein_coding	CXXC finger 4
chr3	133946476	133963814	+	133942648	133963814	A5SS	0.5	50	50	ENSMUST00000197151.5	ENSMUSG00000044365.16	Cxxc4	chr3	protein_coding	CXXC finger 4
chr3	133942648	133963814	+	133942648;133946476	133945164;133963814	ES	0.5	50	50	ENSMUST00000181904.3	ENSMUSG00000044365.16	Cxxc4	chr3	protein_coding	CXXC finger 4
chr3	134948114	134949361	+	134948114;134948393	134948238;134949361	ES	0.5	50	50	ENSMUST00000062893.12	ENSMUSG00000045328.12	Cenpe	chr3	protein_coding	centromere protein E
chr3	134987129	134991349	+	134987129	134991276	A3SS	0.5	50	50	ENSMUST00000120397.8	ENSMUSG00000028167.16	Bdh2	chr3	protein_coding	3-hydroxybutyrate dehydrogenase, type 2
chr3	134994448	134995316	+	134994100	134995316	A5SS	0.5	50	50	ENSMUST00000120397.8	ENSMUSG00000028167.16	Bdh2	chr3	protein_coding	3-hydroxybutyrate dehydrogenase, type 2
chr3	135029532;135030397	135030270;135031855	+	135029532	135031855	cassetteExon	0.5	100	100	ENSMUST00000145195.8	ENSMUSG00000037994.15	Slc9b2	chr3	protein_coding	solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2
chr3	135013542	135015759	+	135013542	135027647	A3SS	0.25	50	50	ENSMUST00000145195.8	ENSMUSG00000037994.15	Slc9b2	chr3	protein_coding	solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2
chr3	135013542	135021642	+	135013542	135027647	A3SS	0.25	50	50	ENSMUST00000145195.8	ENSMUSG00000037994.15	Slc9b2	chr3	protein_coding	solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2
chr3	135013542	135022815	+	135013542	135027647	A3SS	0.25	50	50	ENSMUST00000145195.8	ENSMUSG00000037994.15	Slc9b2	chr3	protein_coding	solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2
chr3	135024221	135027647	+	135013542	135027647	A5SS	0.5	50	50	ENSMUST00000145195.8	ENSMUSG00000037994.15	Slc9b2	chr3	protein_coding	solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2
chr3	135013542	135022815	+	135013542;135021711	135021642;135022815	ES	0.33	50	50	ENSMUST00000126034.4	ENSMUSG00000037994.15	Slc9b2	chr3	protein_coding	solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2
chr3	135029532	135031855	+	135029532	135030270	3pMXE	0.5	50	50	ENSMUST00000126034.4	ENSMUSG00000037994.15	Slc9b2	chr3	protein_coding	solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2
chr3	135013542;135015848	135015759;135022815	+	135013542;135021711	135021642;135022815	MXE	0.5	100	100	ENSMUST00000126034.4	ENSMUSG00000037994.15	Slc9b2	chr3	protein_coding	solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2
chr3	135013542	135022815	+	135013542;135015848	135015759;135022815	ES	0.33	50	50	ENSMUST00000149655.6	ENSMUSG00000037994.15	Slc9b2	chr3	protein_coding	solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2
chr3	135053883;135054534	135054088;135060772	+	135053883	135060772	cassetteExon	0.5	100	100	ENSMUST00000159658.8	ENSMUSG00000050150.17	Slc9b1	chr3	protein_coding	solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1
chr3	135099829	135103357	+	135099829;135100741	135100605;135103357	ES	0.5	50	50	ENSMUST00000078568.12	ENSMUSG00000050150.17	Slc9b1	chr3	protein_coding	solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1
chr3	135096289	135097922	+	135096289	135097861	A3SS	0.5	50	50	ENSMUST00000078568.12	ENSMUSG00000050150.17	Slc9b1	chr3	protein_coding	solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1
chr3	135098010	135098458	+	135098010	135099721	A3SS	0.5	50	50	ENSMUST00000078568.12	ENSMUSG00000050150.17	Slc9b1	chr3	protein_coding	solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1
chr3	135053883	135060772	+	135054534	135060772	A5SS&ES	0.5	50	50	ENSMUST00000160941.8	ENSMUSG00000050150.17	Slc9b1	chr3	protein_coding	solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1
chr3	135161138;135162405	135162362;135164559	+	135161138	135164559	cassetteExon	0.5	100	100	ENSMUST00000196446.5	ENSMUSG00000078578.10	Ube2d3	chr3	protein_coding	ubiquitin-conjugating enzyme E2D 3
chr3	135168804;135169531	135169482;135170956	+	135168804	135170956	cassetteExon	0.5	100	100	ENSMUST00000196446.5	ENSMUSG00000078578.10	Ube2d3	chr3	protein_coding	ubiquitin-conjugating enzyme E2D 3
chr3	135145559	135147266	+	135145559	135160947	A3SS	0.5	50	50	ENSMUST00000196446.5	ENSMUSG00000078578.10	Ube2d3	chr3	protein_coding	ubiquitin-conjugating enzyme E2D 3
chr3	135144113	135145405	+	135143945	135145405	A5SS	0.14	50	50	ENSMUST00000196446.5	ENSMUSG00000078578.10	Ube2d3	chr3	protein_coding	ubiquitin-conjugating enzyme E2D 3
chr3	135144193	135145405	+	135143945	135145405	A5SS	0.14	50	50	ENSMUST00000196446.5	ENSMUSG00000078578.10	Ube2d3	chr3	protein_coding	ubiquitin-conjugating enzyme E2D 3
chr3	135144323	135145405	+	135143945	135145405	A5SS	0.14	50	50	ENSMUST00000196446.5	ENSMUSG00000078578.10	Ube2d3	chr3	protein_coding	ubiquitin-conjugating enzyme E2D 3
chr3	135144459	135145405	+	135143945	135145405	A5SS	0.14	50	50	ENSMUST00000196446.5	ENSMUSG00000078578.10	Ube2d3	chr3	protein_coding	ubiquitin-conjugating enzyme E2D 3
chr3	135144625	135145405	+	135143945	135145405	A5SS	0.14	50	50	ENSMUST00000196446.5	ENSMUSG00000078578.10	Ube2d3	chr3	protein_coding	ubiquitin-conjugating enzyme E2D 3
chr3	135144631	135145405	+	135143945	135145405	A5SS	0.14	50	50	ENSMUST00000196446.5	ENSMUSG00000078578.10	Ube2d3	chr3	protein_coding	ubiquitin-conjugating enzyme E2D 3
chr3	135144193	135145405	+	135144113	135145405	A5SS	0.14	50	50	ENSMUST00000106291.10	ENSMUSG00000078578.10	Ube2d3	chr3	protein_coding	ubiquitin-conjugating enzyme E2D 3
chr3	135144323	135145405	+	135144113	135145405	A5SS	0.14	50	50	ENSMUST00000106291.10	ENSMUSG00000078578.10	Ube2d3	chr3	protein_coding	ubiquitin-conjugating enzyme E2D 3
chr3	135144459	135145405	+	135144113	135145405	A5SS	0.14	50	50	ENSMUST00000106291.10	ENSMUSG00000078578.10	Ube2d3	chr3	protein_coding	ubiquitin-conjugating enzyme E2D 3
chr3	135144625	135145405	+	135144113	135145405	A5SS	0.14	50	50	ENSMUST00000106291.10	ENSMUSG00000078578.10	Ube2d3	chr3	protein_coding	ubiquitin-conjugating enzyme E2D 3
chr3	135144631	135145405	+	135144113	135145405	A5SS	0.14	50	50	ENSMUST00000106291.10	ENSMUSG00000078578.10	Ube2d3	chr3	protein_coding	ubiquitin-conjugating enzyme E2D 3
chr3	135144323	135145405	+	135144193	135145405	A5SS	0.14	50	50	ENSMUST00000199613.5	ENSMUSG00000078578.10	Ube2d3	chr3	protein_coding	ubiquitin-conjugating enzyme E2D 3
chr3	135144459	135145405	+	135144193	135145405	A5SS	0.14	50	50	ENSMUST00000199613.5	ENSMUSG00000078578.10	Ube2d3	chr3	protein_coding	ubiquitin-conjugating enzyme E2D 3
chr3	135144625	135145405	+	135144193	135145405	A5SS	0.14	50	50	ENSMUST00000199613.5	ENSMUSG00000078578.10	Ube2d3	chr3	protein_coding	ubiquitin-conjugating enzyme E2D 3
chr3	135144631	135145405	+	135144193	135145405	A5SS	0.14	50	50	ENSMUST00000199613.5	ENSMUSG00000078578.10	Ube2d3	chr3	protein_coding	ubiquitin-conjugating enzyme E2D 3
chr3	135144459	135145422	+	135144459	135145405	A3SS	0.5	50	50	ENSMUST00000166033.6	ENSMUSG00000078578.10	Ube2d3	chr3	protein_coding	ubiquitin-conjugating enzyme E2D 3
chr3	135144323	135145405	+	135144459	135145405	A5SS	0.14	50	50	ENSMUST00000166033.6	ENSMUSG00000078578.10	Ube2d3	chr3	protein_coding	ubiquitin-conjugating enzyme E2D 3
chr3	135144625	135145405	+	135144459	135145405	A5SS	0.14	50	50	ENSMUST00000166033.6	ENSMUSG00000078578.10	Ube2d3	chr3	protein_coding	ubiquitin-conjugating enzyme E2D 3
chr3	135144631	135145405	+	135144459	135145405	A5SS	0.14	50	50	ENSMUST00000166033.6	ENSMUSG00000078578.10	Ube2d3	chr3	protein_coding	ubiquitin-conjugating enzyme E2D 3
chr3	135144625	135145405	+	135144323	135145405	A5SS	0.14	50	50	ENSMUST00000196591.5	ENSMUSG00000078578.10	Ube2d3	chr3	protein_coding	ubiquitin-conjugating enzyme E2D 3
chr3	135144631	135145405	+	135144323	135145405	A5SS	0.14	50	50	ENSMUST00000196591.5	ENSMUSG00000078578.10	Ube2d3	chr3	protein_coding	ubiquitin-conjugating enzyme E2D 3
chr3	135144631	135145405	+	135144625	135145405	A5SS	0.14	50	50	ENSMUST00000197859.5	ENSMUSG00000078578.10	Ube2d3	chr3	protein_coding	ubiquitin-conjugating enzyme E2D 3
chr3	135217734	135223664	+	135217734;135218208	135218107;135223664	ES	0.33	50	50	ENSMUST00000131610.8	ENSMUSG00000028164.16	Manba	chr3	protein_coding	mannosidase, beta A, lysosomal
chr3	135223121	135223664	+	135218208	135223664	A5SS	0.33	50	50	ENSMUST00000131610.8	ENSMUSG00000028164.16	Manba	chr3	protein_coding	mannosidase, beta A, lysosomal
chr3	135254871	135254961	+	135253397	135254961	A5SS	0.5	50	50	ENSMUST00000131610.8	ENSMUSG00000028164.16	Manba	chr3	protein_coding	mannosidase, beta A, lysosomal
chr3	135256431	135256824	+	135255128	135256824	A5SS	0.33	50	50	ENSMUST00000131610.8	ENSMUSG00000028164.16	Manba	chr3	protein_coding	mannosidase, beta A, lysosomal
chr3	135256579	135256824	+	135255128	135256824	A5SS	0.33	50	50	ENSMUST00000131610.8	ENSMUSG00000028164.16	Manba	chr3	protein_coding	mannosidase, beta A, lysosomal
chr3	135269110;135269558	135269440;135272249	+	135269110	135272249	cassetteExon	0.5	100	100	ENSMUST00000029814.10	ENSMUSG00000028164.16	Manba	chr3	protein_coding	mannosidase, beta A, lysosomal
chr3	135260685	135262385	+	135260685	135268966	A3SS	0.5	50	50	ENSMUST00000029814.10	ENSMUSG00000028164.16	Manba	chr3	protein_coding	mannosidase, beta A, lysosomal
chr3	135223121	135223664	+	135217734	135223664	A5SS	0.33	50	50	ENSMUST00000029814.10	ENSMUSG00000028164.16	Manba	chr3	protein_coding	mannosidase, beta A, lysosomal
chr3	135256579	135256824	+	135256431	135256824	A5SS	0.33	50	50	ENSMUST00000130147.8	ENSMUSG00000028164.16	Manba	chr3	protein_coding	mannosidase, beta A, lysosomal
chr3	135291276	135296077	-	135291276;135295265	135295088;135296077	ES	0.5	50	50	ENSMUST00000029812.14	ENSMUSG00000028163.18	Nfkb1	chr3	protein_coding	nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105
chr3	135296249	135297315	-	135296249;135296607	135296541;135297315	ES	0.5	50	50	ENSMUST00000029812.14	ENSMUSG00000028163.18	Nfkb1	chr3	protein_coding	nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105
chr3	135332504;135344917	135344901;135361261	-	135332504	135361261	cassetteExon	0.5	100	100	ENSMUST00000029812.14	ENSMUSG00000028163.18	Nfkb1	chr3	protein_coding	nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105
chr3	135296249	135297315	-	135296607	135297315	3pMXE	0.5	50	50	ENSMUST00000150007.2	ENSMUSG00000028163.18	Nfkb1	chr3	protein_coding	nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105
chr3	135531561	135532001	+	135531292	135532001	A5SS	0.33	50	50	ENSMUST00000081978.10	ENSMUSG00000053897.16	Slc39a8	chr3	protein_coding	solute carrier family 39 (metal ion transporter), member 8
chr3	135531844	135532001	+	135531292	135532001	A5SS	0.33	50	50	ENSMUST00000081978.10	ENSMUSG00000053897.16	Slc39a8	chr3	protein_coding	solute carrier family 39 (metal ion transporter), member 8
chr3	135531844	135532001	+	135531561	135532001	A5SS	0.33	50	50	ENSMUST00000139953.2	ENSMUSG00000053897.16	Slc39a8	chr3	protein_coding	solute carrier family 39 (metal ion transporter), member 8
chr3	135634094	135821895	+	135634094	135634499	3pMXE	0.5	50	50	ENSMUST00000197498.2	ENSMUSG00000104710.2	Gm31243	chr3	lncRNA	predicted gene, 31243
chr3	135960785;135990018	135989620;136031631	-	135960785	136031631	cassetteExon	0.5	100	100	ENSMUST00000196159.5	ENSMUSG00000037922.14	Bank1	chr3	protein_coding	B cell scaffold protein with ankyrin repeats 1
chr3	135799354	135806042	-	135799351	135806042	A3SS	0.5	50	50	ENSMUST00000196159.5	ENSMUSG00000037922.14	Bank1	chr3	protein_coding	B cell scaffold protein with ankyrin repeats 1
chr3	135806143	135809611	-	135806350	135809611	A3SS	0.5	50	50	ENSMUST00000196159.5	ENSMUSG00000037922.14	Bank1	chr3	protein_coding	B cell scaffold protein with ankyrin repeats 1
chr3	136376662	136503487	+	136376662;136486321	136486223;136503487	ES	0.5	50	50	ENSMUST00000124206.2	ENSMUSG00000028161.18	Ppp3ca	chr3	protein_coding	protein phosphatase 3, catalytic subunit, alpha isoform
chr3	136634380;136637801	136637772;136640790	+	136634380	136640790	cassetteExon	0.5	100	100	ENSMUST00000070198.14	ENSMUSG00000028161.18	Ppp3ca	chr3	protein_coding	protein phosphatase 3, catalytic subunit, alpha isoform
chr3	136545860	136574363	+	136503687	136574363	A5SS	0.5	50	50	ENSMUST00000070198.14	ENSMUSG00000028161.18	Ppp3ca	chr3	protein_coding	protein phosphatase 3, catalytic subunit, alpha isoform
chr3	136608202	136608864	+	136596291	136608864	A5SS	0.5	50	50	ENSMUST00000070198.14	ENSMUSG00000028161.18	Ppp3ca	chr3	protein_coding	protein phosphatase 3, catalytic subunit, alpha isoform
chr3	137085674	137109745	+	137085674;137097467	137097354;137109745	ES	0.5	50	50	ENSMUST00000122064.8	ENSMUSG00000054690.18	Emcn	chr3	protein_coding	endomucin
chr3	137097467	137122482	+	137097467;137109783	137109745;137122482	ES	0.5	50	50	ENSMUST00000122064.8	ENSMUSG00000054690.18	Emcn	chr3	protein_coding	endomucin
chr3	137085674;137097467	137097354;137122482	+	137085674;137109783	137109745;137122482	MXE	0.5	100	100	ENSMUST00000128985.2	ENSMUSG00000054690.18	Emcn	chr3	protein_coding	endomucin
chr3	137330034	137331727	+	137330034	137331080	3pMXE	0.5	50	50	ENSMUST00000167564.2	ENSMUSG00000046818.8	Ddit4l	chr3	protein_coding	DNA-damage-inducible transcript 4-like
chr3	137329644	137329893	+	137327390	137329893	A5SS	0.5	50	50	ENSMUST00000167564.2	ENSMUSG00000046818.8	Ddit4l	chr3	protein_coding	DNA-damage-inducible transcript 4-like
chr3	137570971	137571319	+	137570971	137571281	A3SS	0.5	50	50	ENSMUST00000041045.14	ENSMUSG00000037894.14	H2az1	chr3	protein_coding	H2A.Z variant histone 1
chr3	137571394	137571841	+	137571394	137571772	A3SS	0.5	50	50	ENSMUST00000041045.14	ENSMUSG00000037894.14	H2az1	chr3	protein_coding	H2A.Z variant histone 1
chr3	137570447	137570894	+	137570457	137570894	A5SS	0.5	50	50	ENSMUST00000041045.14	ENSMUSG00000037894.14	H2az1	chr3	protein_coding	H2A.Z variant histone 1
chr3	137571810	137572147	+	137571901	137572147	A5SS	0.5	50	50	ENSMUST00000041045.14	ENSMUSG00000037894.14	H2az1	chr3	protein_coding	H2A.Z variant histone 1
chr3	137571394;137571810	137571772;137572147	+	137571394;137571901	137571841;137572147	MXE	0.5	100	100	ENSMUST00000174561.8	ENSMUSG00000037894.14	H2az1	chr3	protein_coding	H2A.Z variant histone 1
chr3	137574172	137591034	+	137573817	137591034	A5SS	0.5	50	50	ENSMUST00000090178.10	ENSMUSG00000074212.8	Dnajb14	chr3	protein_coding	DnaJ heat shock protein family (Hsp40) member B14
chr3	137625716	137632570	+	137625716;137630931	137630873;137632570	ES	0.5	50	50	ENSMUST00000197064.5	ENSMUSG00000091512.6	Lamtor3	chr3	protein_coding	late endosomal/lysosomal adaptor, MAPK and MTOR activator 3
chr3	137624424	137624634	+	137624388	137624634	A5SS	0.5	50	50	ENSMUST00000197064.5	ENSMUSG00000091512.6	Lamtor3	chr3	protein_coding	late endosomal/lysosomal adaptor, MAPK and MTOR activator 3
chr3	137625716	137632570	+	137630931	137632570	5pMXE	0.5	50	50	ENSMUST00000200107.2	ENSMUSG00000091512.6	Lamtor3	chr3	protein_coding	late endosomal/lysosomal adaptor, MAPK and MTOR activator 3
chr3	137667336	137687080	-	137667336;137671764	137671642;137687080	ES	0.33	50	50	ENSMUST00000029806.13	ENSMUSG00000028159.15	Dapp1	chr3	protein_coding	dual adaptor for phosphotyrosine and 3-phosphoinositides 1
chr3	137655538	137659098	-	137655538	137667203	A5SS	0.2	50	50	ENSMUST00000029806.13	ENSMUSG00000028159.15	Dapp1	chr3	protein_coding	dual adaptor for phosphotyrosine and 3-phosphoinositides 1
chr3	137655538	137660313	-	137655538	137667203	A5SS	0.2	50	50	ENSMUST00000029806.13	ENSMUSG00000028159.15	Dapp1	chr3	protein_coding	dual adaptor for phosphotyrosine and 3-phosphoinositides 1
chr3	137655538	137661590	-	137655538	137667203	A5SS	0.2	50	50	ENSMUST00000029806.13	ENSMUSG00000028159.15	Dapp1	chr3	protein_coding	dual adaptor for phosphotyrosine and 3-phosphoinositides 1
chr3	137655538	137687080	-	137655538;137667336	137667203;137687080	ES	0.33	50	50	ENSMUST00000136613.4	ENSMUSG00000028159.15	Dapp1	chr3	protein_coding	dual adaptor for phosphotyrosine and 3-phosphoinositides 1
chr3	137655538	137687080	-	137655538	137661590	5pMXE	0.2	50	50	ENSMUST00000184222.6	ENSMUSG00000028159.15	Dapp1	chr3	protein_coding	dual adaptor for phosphotyrosine and 3-phosphoinositides 1
chr3	137655538	137659098	-	137655538	137661590	A5SS	0.2	50	50	ENSMUST00000184222.6	ENSMUSG00000028159.15	Dapp1	chr3	protein_coding	dual adaptor for phosphotyrosine and 3-phosphoinositides 1
chr3	137655538	137660313	-	137655538	137661590	A5SS	0.2	50	50	ENSMUST00000184222.6	ENSMUSG00000028159.15	Dapp1	chr3	protein_coding	dual adaptor for phosphotyrosine and 3-phosphoinositides 1
chr3	137655538	137687080	-	137655538	137660313	5pMXE	0.2	50	50	ENSMUST00000124827.8	ENSMUSG00000028159.15	Dapp1	chr3	protein_coding	dual adaptor for phosphotyrosine and 3-phosphoinositides 1
chr3	137655538	137659098	-	137655538	137660313	A5SS	0.2	50	50	ENSMUST00000124827.8	ENSMUSG00000028159.15	Dapp1	chr3	protein_coding	dual adaptor for phosphotyrosine and 3-phosphoinositides 1
chr3	137646669	137655408	-	137638950	137655408	A3SS	0.5	50	50	ENSMUST00000154716.2	ENSMUSG00000028159.15	Dapp1	chr3	protein_coding	dual adaptor for phosphotyrosine and 3-phosphoinositides 1
chr3	137671764	137687080	-	137655538	137687080	A3SS	0.33	50	50	ENSMUST00000154716.2	ENSMUSG00000028159.15	Dapp1	chr3	protein_coding	dual adaptor for phosphotyrosine and 3-phosphoinositides 1
chr3	137638950	137641343	-	137638950	137655408	A5SS	0.5	50	50	ENSMUST00000154716.2	ENSMUSG00000028159.15	Dapp1	chr3	protein_coding	dual adaptor for phosphotyrosine and 3-phosphoinositides 1
chr3	137655538	137659098	-	137655538	137687080	A5SS	0.2	50	50	ENSMUST00000154716.2	ENSMUSG00000028159.15	Dapp1	chr3	protein_coding	dual adaptor for phosphotyrosine and 3-phosphoinositides 1
chr3	137777614	137782925	+	137776210	137782925	A5SS	0.5	50	50	ENSMUST00000163080.3	ENSMUSG00000090066.3	1110002E22Rik	chr3	protein_coding	RIKEN cDNA 1110002E22 gene
chr3	137831006	137839761	-	137831006	137837001	5pMXE	0.5	50	50	ENSMUST00000029805.13	ENSMUSG00000028158.15	Mttp	chr3	protein_coding	microsomal triglyceride transfer protein
chr3	137849468	137853136	+	137849357	137853136	A5SS	0.2	50	50	ENSMUST00000040321.13	ENSMUSG00000004127.13	Trmt10a	chr3	protein_coding	tRNA methyltransferase 10A
chr3	137849756	137853136	+	137849357	137853136	A5SS	0.2	50	50	ENSMUST00000040321.13	ENSMUSG00000004127.13	Trmt10a	chr3	protein_coding	tRNA methyltransferase 10A
chr3	137851686	137853136	+	137849357	137853136	A5SS	0.2	50	50	ENSMUST00000040321.13	ENSMUSG00000004127.13	Trmt10a	chr3	protein_coding	tRNA methyltransferase 10A
chr3	137852154	137853136	+	137849357	137853136	A5SS	0.2	50	50	ENSMUST00000040321.13	ENSMUSG00000004127.13	Trmt10a	chr3	protein_coding	tRNA methyltransferase 10A
chr3	137849756	137853136	+	137849468	137853136	A5SS	0.2	50	50	ENSMUST00000162864.8	ENSMUSG00000004127.13	Trmt10a	chr3	protein_coding	tRNA methyltransferase 10A
chr3	137851686	137853136	+	137849468	137853136	A5SS	0.2	50	50	ENSMUST00000162864.8	ENSMUSG00000004127.13	Trmt10a	chr3	protein_coding	tRNA methyltransferase 10A
chr3	137852154	137853136	+	137849468	137853136	A5SS	0.2	50	50	ENSMUST00000162864.8	ENSMUSG00000004127.13	Trmt10a	chr3	protein_coding	tRNA methyltransferase 10A
chr3	137849756	137853136	+	137849756;137851686	137851522;137853136	ES	0.33	50	50	ENSMUST00000159622.8	ENSMUSG00000004127.13	Trmt10a	chr3	protein_coding	tRNA methyltransferase 10A
chr3	137849756;137852154	137852048;137853136	+	137849756;137851686	137851522;137853136	MXE	0.5	100	100	ENSMUST00000159622.8	ENSMUSG00000004127.13	Trmt10a	chr3	protein_coding	tRNA methyltransferase 10A
chr3	137849756	137853136	+	137849756;137852154	137852048;137853136	ES	0.33	50	50	ENSMUST00000159481.8	ENSMUSG00000004127.13	Trmt10a	chr3	protein_coding	tRNA methyltransferase 10A
chr3	137889551	137894150	-	137889551	137891905	5pMXE	0.33	50	50	ENSMUST00000012186.9	ENSMUSG00000012042.10	4930579F01Rik	chr3	protein_coding	RIKEN cDNA 4930579F01 gene
chr3	137889551	137892022	-	137889551	137891905	A5SS	0.33	50	50	ENSMUST00000012186.9	ENSMUSG00000012042.10	4930579F01Rik	chr3	protein_coding	RIKEN cDNA 4930579F01 gene
chr3	137943474;137945165	137944983;137945250	-	137943474	137945250	cassetteExon	0.5	100	100	ENSMUST00000199804.3	ENSMUSG00000012042.10	4930579F01Rik	chr3	protein_coding	RIKEN cDNA 4930579F01 gene
chr3	137917013	137943362	-	137899584	137943362	A3SS	0.2	50	50	ENSMUST00000199804.3	ENSMUSG00000012042.10	4930579F01Rik	chr3	protein_coding	RIKEN cDNA 4930579F01 gene
chr3	137923661	137943362	-	137899584	137943362	A3SS	0.2	50	50	ENSMUST00000199804.3	ENSMUSG00000012042.10	4930579F01Rik	chr3	protein_coding	RIKEN cDNA 4930579F01 gene
chr3	137932713	137943362	-	137899584	137943362	A3SS	0.2	50	50	ENSMUST00000199804.3	ENSMUSG00000012042.10	4930579F01Rik	chr3	protein_coding	RIKEN cDNA 4930579F01 gene
chr3	137935711	137943362	-	137899584	137943362	A3SS	0.2	50	50	ENSMUST00000199804.3	ENSMUSG00000012042.10	4930579F01Rik	chr3	protein_coding	RIKEN cDNA 4930579F01 gene
chr3	137889551	137892022	-	137889551	137894150	A5SS	0.33	50	50	ENSMUST00000199804.3	ENSMUSG00000012042.10	4930579F01Rik	chr3	protein_coding	RIKEN cDNA 4930579F01 gene
chr3	137923661	137943362	-	137917013	137943362	A3SS	0.2	50	50	ENSMUST00000185122.8	ENSMUSG00000099146.8	0610031O16Rik	chr3	lncRNA	RIKEN cDNA 0610031O16 gene
chr3	137932713	137943362	-	137917013	137943362	A3SS	0.2	50	50	ENSMUST00000185122.8	ENSMUSG00000099146.8	0610031O16Rik	chr3	lncRNA	RIKEN cDNA 0610031O16 gene
chr3	137935711	137943362	-	137917013	137943362	A3SS	0.2	50	50	ENSMUST00000185122.8	ENSMUSG00000099146.8	0610031O16Rik	chr3	lncRNA	RIKEN cDNA 0610031O16 gene
chr3	137932713	137943362	-	137923661	137943362	A3SS	0.2	50	50	ENSMUST00000183783.8	ENSMUSG00000099146.8	0610031O16Rik	chr3	lncRNA	RIKEN cDNA 0610031O16 gene
chr3	137935711	137943362	-	137923661	137943362	A3SS	0.2	50	50	ENSMUST00000183783.8	ENSMUSG00000099146.8	0610031O16Rik	chr3	lncRNA	RIKEN cDNA 0610031O16 gene
chr3	137935711	137943362	-	137932713	137943362	A3SS	0.2	50	50	ENSMUST00000184166.8	ENSMUSG00000099146.8	0610031O16Rik	chr3	lncRNA	RIKEN cDNA 0610031O16 gene
chr3	137933924	137934540	+	137933805	137934540	A5SS	0.5	50	50	ENSMUST00000090171.7	ENSMUSG00000055301.9	Adh7	chr3	protein_coding	alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide
chr3	137983497	137985492	+	137975969	137985492	A5SS	0.5	50	50	ENSMUST00000162032.8	ENSMUSG00000074207.11	Adh1	chr3	protein_coding	alcohol dehydrogenase 1 (class I)
chr3	137985512	137988197	+	137986273	137988197	A5SS&ES	0.5	50	50	ENSMUST00000162032.8	ENSMUSG00000074207.11	Adh1	chr3	protein_coding	alcohol dehydrogenase 1 (class I)
chr3	138123987	138124951	+	138123987	138124469	3pMXE	0.5	50	50	ENSMUST00000162260.2	ENSMUSG00000037797.15	Adh4	chr3	protein_coding	alcohol dehydrogenase 4 (class II), pi polypeptide
chr3	138121310	138123850	+	138121310	138123886	A3SS	0.5	50	50	ENSMUST00000162260.2	ENSMUSG00000037797.15	Adh4	chr3	protein_coding	alcohol dehydrogenase 4 (class II), pi polypeptide
chr3	138151152	138153613	+	138151152;138152985	138152844;138153613	ES	0.5	50	50	ENSMUST00000005964.7	ENSMUSG00000028138.9	Adh5	chr3	protein_coding	alcohol dehydrogenase 5 (class III), chi polypeptide
chr3	138149331	138151051	+	138148954	138151051	A5SS	0.5	50	50	ENSMUST00000005964.7	ENSMUSG00000028138.9	Adh5	chr3	protein_coding	alcohol dehydrogenase 5 (class III), chi polypeptide
chr3	138168191	138174595	-	138168191;138172128	138171985;138174595	ES	0.5	50	50	ENSMUST00000029804.13	ENSMUSG00000005813.13	Metap1	chr3	protein_coding	methionyl aminopeptidase 1
chr3	138178050;138179114	138179038;138179665	-	138178050	138179665	cassetteExon	0.5	100	100	ENSMUST00000029804.13	ENSMUSG00000005813.13	Metap1	chr3	protein_coding	methionyl aminopeptidase 1
chr3	138186561	138187285	-	138186561	138188828	A5SS	0.5	50	50	ENSMUST00000029804.13	ENSMUSG00000005813.13	Metap1	chr3	protein_coding	methionyl aminopeptidase 1
chr3	138168191	138174595	-	138172128	138174595	3pMXE	0.5	50	50	ENSMUST00000200365.5	ENSMUSG00000005813.13	Metap1	chr3	protein_coding	methionyl aminopeptidase 1
chr3	138252188	138256024	+	138252188;138253515	138253420;138256024	ES	0.5	50	50	ENSMUST00000029803.12	ENSMUSG00000028156.13	Eif4e	chr3	protein_coding	eukaryotic translation initiation factor 4E
chr3	138233075;138239272	138239137;138252082	+	138233075	138252082	cassetteExon	0.5	100	100	ENSMUST00000029803.12	ENSMUSG00000028156.13	Eif4e	chr3	protein_coding	eukaryotic translation initiation factor 4E
chr3	138253515	138261683	+	138253515	138256024	A3SS&ES	0.5	50	50	ENSMUST00000029803.12	ENSMUSG00000028156.13	Eif4e	chr3	protein_coding	eukaryotic translation initiation factor 4E
chr3	138252188	138256024	+	138252188	138253420	A3SS&ES	0.5	50	50	ENSMUST00000200239.5	ENSMUSG00000028156.13	Eif4e	chr3	protein_coding	eukaryotic translation initiation factor 4E
chr3	138448421;138484139	138484084;138574107	+	138448421	138574107	cassetteExon	0.5	100	100	ENSMUST00000029800.9	ENSMUSG00000028152.11	Tspan5	chr3	protein_coding	tetraspanin 5
chr3	138600279	138602614	+	138600279	138602550	A3SS	0.5	50	50	ENSMUST00000029800.9	ENSMUSG00000028152.11	Tspan5	chr3	protein_coding	tetraspanin 5
chr3	138448616	138574107	+	138448421	138574107	A5SS	0.16	50	50	ENSMUST00000029800.9	ENSMUSG00000028152.11	Tspan5	chr3	protein_coding	tetraspanin 5
chr3	138489060	138574107	+	138448421	138574107	A5SS	0.16	50	50	ENSMUST00000029800.9	ENSMUSG00000028152.11	Tspan5	chr3	protein_coding	tetraspanin 5
chr3	138515785	138574107	+	138448421	138574107	A5SS	0.16	50	50	ENSMUST00000029800.9	ENSMUSG00000028152.11	Tspan5	chr3	protein_coding	tetraspanin 5
chr3	138566428	138574107	+	138448421	138574107	A5SS	0.16	50	50	ENSMUST00000029800.9	ENSMUSG00000028152.11	Tspan5	chr3	protein_coding	tetraspanin 5
chr3	138448616	138574107	+	138484139	138574107	A5SS&ES	0.16	50	50	ENSMUST00000127772.2	ENSMUSG00000028152.11	Tspan5	chr3	protein_coding	tetraspanin 5
chr3	138489060	138574107	+	138484139	138574107	A5SS	0.16	50	50	ENSMUST00000127772.2	ENSMUSG00000028152.11	Tspan5	chr3	protein_coding	tetraspanin 5
chr3	138515785	138574107	+	138484139	138574107	A5SS	0.16	50	50	ENSMUST00000127772.2	ENSMUSG00000028152.11	Tspan5	chr3	protein_coding	tetraspanin 5
chr3	138566428	138574107	+	138484139	138574107	A5SS	0.16	50	50	ENSMUST00000127772.2	ENSMUSG00000028152.11	Tspan5	chr3	protein_coding	tetraspanin 5
chr3	138489060	138574107	+	138448616	138574107	A5SS	0.16	50	50	ENSMUST00000153336.6	ENSMUSG00000028152.11	Tspan5	chr3	protein_coding	tetraspanin 5
chr3	138515785	138574107	+	138448616	138574107	A5SS	0.16	50	50	ENSMUST00000153336.6	ENSMUSG00000028152.11	Tspan5	chr3	protein_coding	tetraspanin 5
chr3	138566428	138574107	+	138448616	138574107	A5SS	0.16	50	50	ENSMUST00000153336.6	ENSMUSG00000028152.11	Tspan5	chr3	protein_coding	tetraspanin 5
chr3	138448421	138574107	+	138484139	138574107	5pMXE	0.16	50	50	ENSMUST00000142001.8	ENSMUSG00000028152.11	Tspan5	chr3	protein_coding	tetraspanin 5
chr3	138515785	138574107	+	138489060	138574107	A5SS	0.33	50	50	ENSMUST00000146356.8	ENSMUSG00000028152.11	Tspan5	chr3	protein_coding	tetraspanin 5
chr3	138566428	138574107	+	138489060	138574107	A5SS	0.33	50	50	ENSMUST00000146356.8	ENSMUSG00000028152.11	Tspan5	chr3	protein_coding	tetraspanin 5
chr3	138566428	138574107	+	138515785	138574107	A5SS	0.16	50	50	ENSMUST00000119993.8	ENSMUSG00000028152.11	Tspan5	chr3	protein_coding	tetraspanin 5
chr3	138671757	138721307	-	138671757;138689629	138689483;138721307	ES	0.5	50	50	ENSMUST00000098574.9	ENSMUSG00000028149.13	Rap1gds1	chr3	protein_coding	RAP1, GTP-GDP dissociation stimulator 1
chr3	138661219	138661955	-	138661222	138661955	A3SS	0.5	50	50	ENSMUST00000098574.9	ENSMUSG00000028149.13	Rap1gds1	chr3	protein_coding	RAP1, GTP-GDP dissociation stimulator 1
chr3	138689629	138690218	-	138689629	138721307	A5SS	0.5	50	50	ENSMUST00000098574.9	ENSMUSG00000028149.13	Rap1gds1	chr3	protein_coding	RAP1, GTP-GDP dissociation stimulator 1
chr3	138721432	138727527	-	138721432	138727574	A5SS	0.5	50	50	ENSMUST00000098574.9	ENSMUSG00000028149.13	Rap1gds1	chr3	protein_coding	RAP1, GTP-GDP dissociation stimulator 1
chr3	138756349	138780402	-	138756349	138780797	A5SS	0.5	50	50	ENSMUST00000098574.9	ENSMUSG00000028149.13	Rap1gds1	chr3	protein_coding	RAP1, GTP-GDP dissociation stimulator 1
chr3	139407534	139414934	+	139407534	139415207	A3SS	0.5	50	50	ENSMUST00000106239.8	ENSMUSG00000047940.14	Stpg2	chr3	protein_coding	sperm tail PG rich repeat containing 2
chr3	140466115	140466367	-	140405841	140466367	A3SS	0.5	50	50	ENSMUST00000198942.2	ENSMUSG00000105777.2	Gm43049	chr3	lncRNA	predicted gene 43049
chr3	141171598	141420405	+	141171598;141383969	141383748;141420405	ES	0.5	50	50	ENSMUST00000106236.9	ENSMUSG00000059921.16	Unc5c	chr3	protein_coding	unc-5 netrin receptor C
chr3	141476943;141492674	141492618;141494632	+	141476943	141494632	cassetteExon	0.5	100	100	ENSMUST00000106236.9	ENSMUSG00000059921.16	Unc5c	chr3	protein_coding	unc-5 netrin receptor C
chr3	141171598	141366066	+	141171598	141383748	A3SS	0.33	50	50	ENSMUST00000106236.9	ENSMUSG00000059921.16	Unc5c	chr3	protein_coding	unc-5 netrin receptor C
chr3	141171598	141420405	+	141171598	141366066	3pMXE	0.33	50	50	ENSMUST00000151007.6	ENSMUSG00000059921.16	Unc5c	chr3	protein_coding	unc-5 netrin receptor C
chr3	141171598	141420405	+	141171598	141383748	3pMXE	0.33	50	50	ENSMUST00000155416.5	ENSMUSG00000059921.16	Unc5c	chr3	protein_coding	unc-5 netrin receptor C
chr3	141586277	141783887	-	141586277	141687682	5pMXE	0.25	50	50	ENSMUST00000029948.15	ENSMUSG00000052430.16	Bmpr1b	chr3	protein_coding	bone morphogenetic protein receptor, type 1B
chr3	141577161	141586118	-	141577166	141586118	A3SS	0.5	50	50	ENSMUST00000029948.15	ENSMUSG00000052430.16	Bmpr1b	chr3	protein_coding	bone morphogenetic protein receptor, type 1B
chr3	141586277	141612075	-	141586277	141687682	A5SS	0.25	50	50	ENSMUST00000029948.15	ENSMUSG00000052430.16	Bmpr1b	chr3	protein_coding	bone morphogenetic protein receptor, type 1B
chr3	141586277	141637160	-	141586277	141687682	A5SS	0.25	50	50	ENSMUST00000029948.15	ENSMUSG00000052430.16	Bmpr1b	chr3	protein_coding	bone morphogenetic protein receptor, type 1B
chr3	141586277	141783887	-	141586277	141637160	5pMXE	0.25	50	50	ENSMUST00000106232.8	ENSMUSG00000052430.16	Bmpr1b	chr3	protein_coding	bone morphogenetic protein receptor, type 1B
chr3	141586277;141612214	141612075;141637160	-	141586277	141637160	cassetteExon	0.5	100	100	ENSMUST00000106232.8	ENSMUSG00000052430.16	Bmpr1b	chr3	protein_coding	bone morphogenetic protein receptor, type 1B
chr3	141586277;141687774	141687682;141874906	-	141586277;141783953	141783887;141874906	MXE	0.5	100	100	ENSMUST00000098568.8	ENSMUSG00000052430.16	Bmpr1b	chr3	protein_coding	bone morphogenetic protein receptor, type 1B
chr3	141586277	141612075	-	141586277	141783887	A5SS	0.25	50	50	ENSMUST00000098568.8	ENSMUSG00000052430.16	Bmpr1b	chr3	protein_coding	bone morphogenetic protein receptor, type 1B
chr3	141983762;141987744	141987613;142009704	-	141983762	142009704	cassetteExon	0.5	100	100	ENSMUST00000029941.16	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	141983762;141988873	141988730;142009704	-	141983762	142009704	cassetteExon	0.5	100	100	ENSMUST00000029941.16	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	142010230;142010483	142010466;142017884	-	142010230	142017884	cassetteExon	0.5	100	100	ENSMUST00000029941.16	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	141990677	142009704	-	141983762	142009704	A3SS	0.2	50	50	ENSMUST00000029941.16	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	142009182	142009704	-	141983762	142009704	A3SS	0.2	50	50	ENSMUST00000029941.16	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	142012059	142017884	-	142010230	142017884	A3SS	0.25	50	50	ENSMUST00000029941.16	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	142015305	142020167	-	142018302	142020167	A3SS&ES	0.33	50	50	ENSMUST00000029941.16	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	142017788	142017884	-	142010230	142017884	A3SS	0.25	50	50	ENSMUST00000029941.16	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	142017975	142020167	-	142018302	142020167	A3SS	0.33	50	50	ENSMUST00000029941.16	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	142097611	142101276	-	142097611	142101347	A5SS	0.5	50	50	ENSMUST00000029941.16	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	141983762	141988730	-	141983762;141987744	141987613;141988730	ES	0.33	50	50	ENSMUST00000195975.5	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	141988873	142009704	-	141988873;141990677	141990558;142009704	ES	0.2	50	50	ENSMUST00000195975.5	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	141983759	141988730	-	141987744	141988730	A3SS&ES	0.33	50	50	ENSMUST00000195975.5	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	142009182	142009704	-	141990677	142009704	A3SS	0.2	50	50	ENSMUST00000195975.5	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	142015305	142020167	-	142017975	142020167	A3SS&ES	0.33	50	50	ENSMUST00000195975.5	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	141983762;141988873	141988730;142009704	-	141983762;141987744	141987613;142009704	MXE	0.5	100	100	ENSMUST00000200043.5	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	141987744;141988873	141988730;142009704	-	141987744	142009704	cassetteExon	0.5	100	100	ENSMUST00000200043.5	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	141990677	142009704	-	141987744	142009704	A3SS	0.2	50	50	ENSMUST00000200043.5	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	142009182	142009704	-	141987744	142009704	A3SS	0.2	50	50	ENSMUST00000200043.5	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	142009182	142009704	-	141988873	142009704	A3SS	0.2	50	50	ENSMUST00000196220.5	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	141983762	141988730	-	141983759	141988730	A3SS	0.33	50	50	ENSMUST00000200650.5	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	141983762	142009704	-	141988873	142009704	A3SS&ES	0.2	50	50	ENSMUST00000200650.5	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	141987744	142009704	-	141988873	142009704	A3SS&ES	0.2	50	50	ENSMUST00000200650.5	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	142010483	142017884	-	142010483;142012059	142012045;142017884	ES	0.25	50	50	ENSMUST00000170361.9	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	142012059;142015305	142015289;142020167	-	142012059;142017975	142017884;142020167	MXE	0.5	100	100	ENSMUST00000170361.9	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	142017788	142017884	-	142012059	142017884	A3SS	0.25	50	50	ENSMUST00000170361.9	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	142010230;142017975	142017884;142020167	-	142010230;142015305	142010466;142020167	MXE	0.5	100	100	ENSMUST00000090134.12	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	142010483;142017975	142017884;142020167	-	142010483;142015305	142012045;142020167	MXE	0.5	100	100	ENSMUST00000090134.12	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	142010230;142018302	142017884;142020167	-	142010230;142015305	142010466;142020167	MXE	0.5	100	100	ENSMUST00000090134.12	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	142010483;142018302	142017884;142020167	-	142010483;142015305	142012045;142020167	MXE	0.5	100	100	ENSMUST00000090134.12	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	142012059;142018302	142017884;142020167	-	142012059;142015305	142015289;142020167	MXE	0.5	100	100	ENSMUST00000090134.12	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	142017788	142017884	-	142010483	142017884	A3SS	0.25	50	50	ENSMUST00000168967.9	ENSMUSG00000028273.16	Pdlim5	chr3	protein_coding	PDZ and LIM domain 5
chr3	142213857	142223881	+	142213857	142216832	3pMXE	0.33	50	50	ENSMUST00000198803.2	ENSMUSG00000105504.5	Gbp5	chr3	protein_coding	guanylate binding protein 5
chr3	142213857	142226801	+	142213857	142216832	3pMXE	0.33	50	50	ENSMUST00000198803.2	ENSMUSG00000105504.5	Gbp5	chr3	protein_coding	guanylate binding protein 5
chr3	142206507	142209582	+	142206507	142207023	A3SS&ES	0.5	50	50	ENSMUST00000198803.2	ENSMUSG00000105504.5	Gbp5	chr3	protein_coding	guanylate binding protein 5
chr3	142202756	142206314	+	142199886	142206314	A5SS	0.5	50	50	ENSMUST00000198803.2	ENSMUSG00000105504.5	Gbp5	chr3	protein_coding	guanylate binding protein 5
chr3	142213857	142223881	+	142213857	142226801	A3SS	0.33	50	50	ENSMUST00000090127.7	ENSMUSG00000105504.5	Gbp5	chr3	protein_coding	guanylate binding protein 5
chr3	142224820	142226801	+	142213857	142226801	A5SS	0.5	50	50	ENSMUST00000090127.7	ENSMUSG00000105504.5	Gbp5	chr3	protein_coding	guanylate binding protein 5
chr3	142213857	142226801	+	142213857;142224820	142223881;142226801	ES	0.5	50	50	ENSMUST00000196255.5	ENSMUSG00000105504.5	Gbp5	chr3	protein_coding	guanylate binding protein 5
chr3	142236200	142240260	+	142236200	142240278	A3SS	0.5	50	50	ENSMUST00000171263.8	ENSMUSG00000040253.16	Gbp7	chr3	protein_coding	guanylate binding protein 7
chr3	142266044	142267501	+	142266044;142266451	142266257;142267501	ES	0.2	50	50	ENSMUST00000199325.5	ENSMUSG00000028268.15	Gbp3	chr3	protein_coding	guanylate binding protein 3
chr3	142266044;142266619	142266482;142267501	+	142266044;142266451	142266257;142267501	MXE	0.5	100	100	ENSMUST00000199325.5	ENSMUSG00000028268.15	Gbp3	chr3	protein_coding	guanylate binding protein 3
chr3	142266044;142266693	142266482;142267501	+	142266044;142266451	142266257;142267501	MXE	0.5	100	100	ENSMUST00000199325.5	ENSMUSG00000028268.15	Gbp3	chr3	protein_coding	guanylate binding protein 3
chr3	142267040	142267501	+	142266451	142267501	A5SS	0.2	50	50	ENSMUST00000199325.5	ENSMUSG00000028268.15	Gbp3	chr3	protein_coding	guanylate binding protein 3
chr3	142266044;142266619	142266257;142267501	+	142266044	142267501	cassetteExon	0.5	100	100	ENSMUST00000106222.9	ENSMUSG00000028268.15	Gbp3	chr3	protein_coding	guanylate binding protein 3
chr3	142266044;142266693	142266257;142267501	+	142266044	142267501	cassetteExon	0.5	100	100	ENSMUST00000106222.9	ENSMUSG00000028268.15	Gbp3	chr3	protein_coding	guanylate binding protein 3
chr3	142266044;142266619	142266482;142267501	+	142266044	142267501	cassetteExon	0.5	100	100	ENSMUST00000106222.9	ENSMUSG00000028268.15	Gbp3	chr3	protein_coding	guanylate binding protein 3
chr3	142266044;142266693	142266482;142267501	+	142266044	142267501	cassetteExon	0.5	100	100	ENSMUST00000106222.9	ENSMUSG00000028268.15	Gbp3	chr3	protein_coding	guanylate binding protein 3
chr3	142267040	142267501	+	142266044	142267501	A5SS	0.2	50	50	ENSMUST00000106222.9	ENSMUSG00000028268.15	Gbp3	chr3	protein_coding	guanylate binding protein 3
chr3	142266619	142267501	+	142266693	142267501	A5SS	0.2	50	50	ENSMUST00000128609.8	ENSMUSG00000028268.15	Gbp3	chr3	protein_coding	guanylate binding protein 3
chr3	142267040	142267501	+	142266693	142267501	A5SS	0.2	50	50	ENSMUST00000128609.8	ENSMUSG00000028268.15	Gbp3	chr3	protein_coding	guanylate binding protein 3
chr3	142267040	142267501	+	142266619	142267501	A5SS	0.2	50	50	ENSMUST00000029935.14	ENSMUSG00000028268.15	Gbp3	chr3	protein_coding	guanylate binding protein 3
chr3	142266044	142267501	+	142266451	142267501	5pMXE	0.2	50	50	ENSMUST00000106221.8	ENSMUSG00000028268.15	Gbp3	chr3	protein_coding	guanylate binding protein 3
chr3	142266619	142267501	+	142266451	142267501	A5SS	0.2	50	50	ENSMUST00000106221.8	ENSMUSG00000028268.15	Gbp3	chr3	protein_coding	guanylate binding protein 3
chr3	142266693	142267501	+	142266451	142267501	A5SS	0.2	50	50	ENSMUST00000106221.8	ENSMUSG00000028268.15	Gbp3	chr3	protein_coding	guanylate binding protein 3
chr3	142330463	142331314	+	142330463	142331274	A3SS	0.5	50	50	ENSMUST00000165774.8	ENSMUSG00000028270.13	Gbp2	chr3	protein_coding	guanylate binding protein 2
chr3	142406936	142424137	+	142406936;142412552	142412450;142424137	ES	0.33	50	50	ENSMUST00000106218.8	ENSMUSG00000040213.14	Kyat3	chr3	protein_coding	kynurenine aminotransferase 3
chr3	142426266;142426500	142426359;142428876	+	142426266	142428876	cassetteExon	0.5	100	100	ENSMUST00000106218.8	ENSMUSG00000040213.14	Kyat3	chr3	protein_coding	kynurenine aminotransferase 3
chr3	142435596;142436469	142436387;142436963	+	142435596	142436963	cassetteExon	0.5	100	100	ENSMUST00000106218.8	ENSMUSG00000040213.14	Kyat3	chr3	protein_coding	kynurenine aminotransferase 3
chr3	142412556	142424137	+	142412552	142424137	A5SS	0.33	50	50	ENSMUST00000106218.8	ENSMUSG00000040213.14	Kyat3	chr3	protein_coding	kynurenine aminotransferase 3
chr3	142444386	142449832	+	142444072	142449832	A5SS	0.5	50	50	ENSMUST00000106218.8	ENSMUSG00000040213.14	Kyat3	chr3	protein_coding	kynurenine aminotransferase 3
chr3	142406936	142424137	+	142406936;142412556	142412450;142424137	ES	0.33	50	50	ENSMUST00000044392.11	ENSMUSG00000040213.14	Kyat3	chr3	protein_coding	kynurenine aminotransferase 3
chr3	142517363	142526298	-	142517363;142517818	142517675;142526298	ES	0.5	50	50	ENSMUST00000043812.15	ENSMUSG00000004591.17	Pkn2	chr3	protein_coding	protein kinase N2
chr3	142517818	142527280	-	142517818;142526407	142526298;142527280	ES	0.5	50	50	ENSMUST00000043812.15	ENSMUSG00000004591.17	Pkn2	chr3	protein_coding	protein kinase N2
chr3	142526407	142534642	-	142526407;142527465	142527280;142534642	ES	0.5	50	50	ENSMUST00000043812.15	ENSMUSG00000004591.17	Pkn2	chr3	protein_coding	protein kinase N2
chr3	142545123	142587372	-	142545123;142559475	142559175;142587372	ES	0.5	50	50	ENSMUST00000043812.15	ENSMUSG00000004591.17	Pkn2	chr3	protein_coding	protein kinase N2
chr3	142505852	142506801	-	142505642	142506801	A3SS	0.5	50	50	ENSMUST00000043812.15	ENSMUSG00000004591.17	Pkn2	chr3	protein_coding	protein kinase N2
chr3	142510628	142515234	-	142509491	142515234	A3SS	0.5	50	50	ENSMUST00000043812.15	ENSMUSG00000004591.17	Pkn2	chr3	protein_coding	protein kinase N2
chr3	142516195	142516452	-	142516248	142516452	A3SS	0.5	50	50	ENSMUST00000043812.15	ENSMUSG00000004591.17	Pkn2	chr3	protein_coding	protein kinase N2
chr3	142526407	142527328	-	142526407	142527280	A5SS	0.33	50	50	ENSMUST00000043812.15	ENSMUSG00000004591.17	Pkn2	chr3	protein_coding	protein kinase N2
chr3	142526407	142534642	-	142526407;142527465	142527328;142534642	ES	0.5	50	50	ENSMUST00000174422.8	ENSMUSG00000004591.17	Pkn2	chr3	protein_coding	protein kinase N2
chr3	142517818	142527280	-	142517818	142526298	A5SS&ES	0.5	50	50	ENSMUST00000174422.8	ENSMUSG00000004591.17	Pkn2	chr3	protein_coding	protein kinase N2
chr3	142517363;142517818	142517675;142527280	-	142517363;142526407	142526298;142527280	MXE	0.5	100	100	ENSMUST00000173830.8	ENSMUSG00000004591.17	Pkn2	chr3	protein_coding	protein kinase N2
chr3	142517363	142526298	-	142517363	142517675	5pMXE	0.5	50	50	ENSMUST00000174169.2	ENSMUSG00000004591.17	Pkn2	chr3	protein_coding	protein kinase N2
chr3	142517818;142527465	142527280;142534642	-	142517818;142526407	142526298;142534642	MXE	0.5	100	100	ENSMUST00000174680.2	ENSMUSG00000004591.17	Pkn2	chr3	protein_coding	protein kinase N2
chr3	142526407	142534642	-	142527465	142534642	3pMXE	0.5	50	50	ENSMUST00000174099.2	ENSMUSG00000004591.17	Pkn2	chr3	protein_coding	protein kinase N2
chr3	142743955	142746263	+	142729928	142746263	A5SS	0.5	50	50	ENSMUST00000200254.2	ENSMUSG00000105652.2	4930519L02Rik	chr3	lncRNA	RIKEN cDNA 4930519L02 gene
chr3	143399964	143417696	-	143378558	143417696	A3SS	0.5	50	50	ENSMUST00000197170.2	ENSMUSG00000105279.2	Gm6260	chr3	lncRNA	predicted gene 6260
chr3	143619638	143660057	-	143584292	143660057	A3SS	0.5	50	50	ENSMUST00000196668.2	ENSMUSG00000105811.2	Gm42707	chr3	lncRNA	predicted gene 42707
chr3	143907812	143908554	-	143907812	143908009	5pMXE	0.33	50	50	ENSMUST00000121796.8	ENSMUSG00000028266.18	Lmo4	chr3	protein_coding	LIM domain only 4
chr3	143907812	143910581	-	143907812	143908009	5pMXE	0.33	50	50	ENSMUST00000121796.8	ENSMUSG00000028266.18	Lmo4	chr3	protein_coding	LIM domain only 4
chr3	143907812	143908554	-	143907812	143910581	A5SS	0.33	50	50	ENSMUST00000120539.8	ENSMUSG00000028266.18	Lmo4	chr3	protein_coding	LIM domain only 4
chr3	143900264	143907574	-	143895066	143907574	A3SS	0.5	50	50	ENSMUST00000196264.5	ENSMUSG00000028266.18	Lmo4	chr3	protein_coding	LIM domain only 4
chr3	143895066	143899657	-	143895066	143907574	A5SS	0.5	50	50	ENSMUST00000196264.5	ENSMUSG00000028266.18	Lmo4	chr3	protein_coding	LIM domain only 4
chr3	144171046;144262846	144262711;144275495	-	144171046	144275495	cassetteExon	0.5	100	100	ENSMUST00000043325.9	ENSMUSG00000040151.10	Hs2st1	chr3	protein_coding	heparan sulfate 2-O-sulfotransferase 1
chr3	144296436	144302584	+	144296436;144300711	144300662;144302584	ES	0.5	50	50	ENSMUST00000144859.4	ENSMUSG00000037072.17	Selenof	chr3	protein_coding	selenoprotein F
chr3	144276560	144283347	+	144276172	144283347	A5SS	0.5	50	50	ENSMUST00000144859.4	ENSMUSG00000037072.17	Selenof	chr3	protein_coding	selenoprotein F
chr3	144296436	144302584	+	144296436	144300662	3pMXE	0.5	50	50	ENSMUST00000151086.3	ENSMUSG00000037072.17	Selenof	chr3	protein_coding	selenoprotein F
chr3	144390900	144397661	-	144390900;144397293	144397219;144397661	ES	0.5	50	50	ENSMUST00000199531.5	ENSMUSG00000037062.14	Sh3glb1	chr3	protein_coding	SH3-domain GRB2-like B1 (endophilin)
chr3	144403228;144407607	144407521;144411274	-	144403228	144411274	cassetteExon	0.5	100	100	ENSMUST00000199531.5	ENSMUSG00000037062.14	Sh3glb1	chr3	protein_coding	SH3-domain GRB2-like B1 (endophilin)
chr3	144403228	144405615	-	144403228	144411274	A5SS	0.33	50	50	ENSMUST00000199531.5	ENSMUSG00000037062.14	Sh3glb1	chr3	protein_coding	SH3-domain GRB2-like B1 (endophilin)
chr3	144390900	144397661	-	144397293	144397661	3pMXE	0.5	50	50	ENSMUST00000198254.5	ENSMUSG00000037062.14	Sh3glb1	chr3	protein_coding	SH3-domain GRB2-like B1 (endophilin)
chr3	144403228	144407521	-	144403228	144405615	A5SS&ES	0.33	50	50	ENSMUST00000198254.5	ENSMUSG00000037062.14	Sh3glb1	chr3	protein_coding	SH3-domain GRB2-like B1 (endophilin)
chr3	144405638	144407521	-	144405638	144407569	A5SS	0.5	50	50	ENSMUST00000198254.5	ENSMUSG00000037062.14	Sh3glb1	chr3	protein_coding	SH3-domain GRB2-like B1 (endophilin)
chr3	144403228;144405638	144405615;144407521	-	144403228	144407521	cassetteExon	0.5	100	100	ENSMUST00000199854.5	ENSMUSG00000037062.14	Sh3glb1	chr3	protein_coding	SH3-domain GRB2-like B1 (endophilin)
chr3	144453355;144454262	144454162;144455426	-	144453355	144455426	cassetteExon	0.5	100	100	ENSMUST00000029932.14	ENSMUSG00000056025.13	Clca3a1	chr3	protein_coding	chloride channel accessory 3A1
chr3	144507943	144511437	-	144507943;144508860	144508693;144511437	ES	0.5	50	50	ENSMUST00000029929.12	ENSMUSG00000028262.14	Clca3a2	chr3	protein_coding	chloride channel accessory 3A2
chr3	144722632	144724557	-	144722632	144724321	A5SS&ES	0.5	50	50	ENSMUST00000029919.7	ENSMUSG00000028255.7	Clca1	chr3	protein_coding	chloride channel accessory 1
chr3	144778128	144781522	-	144778128	144781388	A5SS	0.5	50	50	ENSMUST00000040465.11	ENSMUSG00000036960.11	Clca2	chr3	protein_coding	chloride channel accessory 2
chr3	144830136	144832784	+	144830136;144831986	144831854;144832784	ES	0.5	50	50	ENSMUST00000098538.9	ENSMUSG00000028256.17	Odf2l	chr3	protein_coding	outer dense fiber of sperm tails 2-like
chr3	144831986	144833592	+	144831986;144832912	144832784;144833592	ES	0.5	50	50	ENSMUST00000098538.9	ENSMUSG00000028256.17	Odf2l	chr3	protein_coding	outer dense fiber of sperm tails 2-like
chr3	144842484	144850073	+	144842484;144845655	144845545;144850073	ES	0.5	50	50	ENSMUST00000098538.9	ENSMUSG00000028256.17	Odf2l	chr3	protein_coding	outer dense fiber of sperm tails 2-like
chr3	144850177	144854292	+	144850177;144852682	144852524;144854292	ES	0.33	50	50	ENSMUST00000098538.9	ENSMUSG00000028256.17	Odf2l	chr3	protein_coding	outer dense fiber of sperm tails 2-like
chr3	144850177;144851714	144851591;144854292	+	144850177;144852682	144852524;144854292	MXE	0.5	100	100	ENSMUST00000098538.9	ENSMUSG00000028256.17	Odf2l	chr3	protein_coding	outer dense fiber of sperm tails 2-like
chr3	144850177;144851714	144851637;144854292	+	144850177;144852682	144852524;144854292	MXE	0.5	100	100	ENSMUST00000098538.9	ENSMUSG00000028256.17	Odf2l	chr3	protein_coding	outer dense fiber of sperm tails 2-like
chr3	144854838;144856552	144856497;144856721	+	144854838	144856721	cassetteExon	0.5	100	100	ENSMUST00000098538.9	ENSMUSG00000028256.17	Odf2l	chr3	protein_coding	outer dense fiber of sperm tails 2-like
chr3	144824420	144829972	+	144824543	144829972	A5SS	0.25	50	50	ENSMUST00000098538.9	ENSMUSG00000028256.17	Odf2l	chr3	protein_coding	outer dense fiber of sperm tails 2-like
chr3	144825119	144829972	+	144824543	144829972	A5SS	0.25	50	50	ENSMUST00000098538.9	ENSMUSG00000028256.17	Odf2l	chr3	protein_coding	outer dense fiber of sperm tails 2-like
chr3	144826439	144829972	+	144824543	144829972	A5SS	0.25	50	50	ENSMUST00000098538.9	ENSMUSG00000028256.17	Odf2l	chr3	protein_coding	outer dense fiber of sperm tails 2-like
chr3	144850177;144851714	144851591;144854292	+	144850177	144854292	cassetteExon	0.5	100	100	ENSMUST00000106192.9	ENSMUSG00000028256.17	Odf2l	chr3	protein_coding	outer dense fiber of sperm tails 2-like
chr3	144850177;144851714	144851637;144854292	+	144850177	144854292	cassetteExon	0.5	100	100	ENSMUST00000106192.9	ENSMUSG00000028256.17	Odf2l	chr3	protein_coding	outer dense fiber of sperm tails 2-like
chr3	144825119	144829972	+	144824420	144829972	A5SS	0.25	50	50	ENSMUST00000098539.7	ENSMUSG00000028256.17	Odf2l	chr3	protein_coding	outer dense fiber of sperm tails 2-like
chr3	144826439	144829972	+	144824420	144829972	A5SS	0.25	50	50	ENSMUST00000098539.7	ENSMUSG00000028256.17	Odf2l	chr3	protein_coding	outer dense fiber of sperm tails 2-like
chr3	144830136	144832784	+	144830136	144831854	A3SS	0.5	50	50	ENSMUST00000196898.5	ENSMUSG00000028256.17	Odf2l	chr3	protein_coding	outer dense fiber of sperm tails 2-like
chr3	144830136;144832912	144832784;144833592	+	144830136;144831986	144831854;144833592	MXE	0.5	100	100	ENSMUST00000029920.15	ENSMUSG00000028256.17	Odf2l	chr3	protein_coding	outer dense fiber of sperm tails 2-like
chr3	144826439	144829972	+	144825119	144829972	A5SS	0.25	50	50	ENSMUST00000199124.5	ENSMUSG00000028256.17	Odf2l	chr3	protein_coding	outer dense fiber of sperm tails 2-like
chr3	144842484	144850073	+	144845655	144850073	5pMXE	0.5	50	50	ENSMUST00000196426.5	ENSMUSG00000028256.17	Odf2l	chr3	protein_coding	outer dense fiber of sperm tails 2-like
chr3	144850177	144852524	+	144850177	144851591	3pMXE	0.25	50	50	ENSMUST00000200014.5	ENSMUSG00000028256.17	Odf2l	chr3	protein_coding	outer dense fiber of sperm tails 2-like
chr3	144850177	144854292	+	144850177	144851591	3pMXE	0.25	50	50	ENSMUST00000200014.5	ENSMUSG00000028256.17	Odf2l	chr3	protein_coding	outer dense fiber of sperm tails 2-like
chr3	144850177	144851637	+	144850177	144851591	A3SS	0.25	50	50	ENSMUST00000200014.5	ENSMUSG00000028256.17	Odf2l	chr3	protein_coding	outer dense fiber of sperm tails 2-like
chr3	144850177	144852524	+	144850177	144851637	A3SS	0.25	50	50	ENSMUST00000198808.5	ENSMUSG00000028256.17	Odf2l	chr3	protein_coding	outer dense fiber of sperm tails 2-like
chr3	144850177	144854292	+	144850177	144851637	A3SS	0.25	50	50	ENSMUST00000198808.5	ENSMUSG00000028256.17	Odf2l	chr3	protein_coding	outer dense fiber of sperm tails 2-like
chr3	145221486	145221792	+	145218975	145221792	A5SS	0.5	50	50	ENSMUST00000029848.5	ENSMUSG00000028197.5	Col24a1	chr3	protein_coding	collagen, type XXIV, alpha 1
chr3	145282751	145283976	+	145282751	145283857	A3SS&ES	0.5	50	50	ENSMUST00000199033.5	ENSMUSG00000074182.9	Znhit6	chr3	protein_coding	zinc finger, HIT type 6
chr3	145282039	145282606	+	145282048	145282606	A5SS	0.25	50	50	ENSMUST00000199033.5	ENSMUSG00000074182.9	Znhit6	chr3	protein_coding	zinc finger, HIT type 6
chr3	145282114	145282606	+	145282048	145282606	A5SS	0.25	50	50	ENSMUST00000199033.5	ENSMUSG00000074182.9	Znhit6	chr3	protein_coding	zinc finger, HIT type 6
chr3	145282173	145282606	+	145282048	145282606	A5SS	0.25	50	50	ENSMUST00000199033.5	ENSMUSG00000074182.9	Znhit6	chr3	protein_coding	zinc finger, HIT type 6
chr3	145282114	145282606	+	145282039	145282606	A5SS	0.25	50	50	ENSMUST00000200574.5	ENSMUSG00000074182.9	Znhit6	chr3	protein_coding	zinc finger, HIT type 6
chr3	145282173	145282606	+	145282039	145282606	A5SS	0.25	50	50	ENSMUST00000200574.5	ENSMUSG00000074182.9	Znhit6	chr3	protein_coding	zinc finger, HIT type 6
chr3	145282114	145282606	+	145282173	145282606	A5SS	0.25	50	50	ENSMUST00000196413.5	ENSMUSG00000074182.9	Znhit6	chr3	protein_coding	zinc finger, HIT type 6
chr3	145466530	145551460	+	145464919	145551460	A5SS	0.33	50	50	ENSMUST00000029845.15	ENSMUSG00000028194.16	Ddah1	chr3	protein_coding	dimethylarginine dimethylaminohydrolase 1
chr3	145516356	145551460	+	145464919	145551460	A5SS	0.33	50	50	ENSMUST00000029845.15	ENSMUSG00000028194.16	Ddah1	chr3	protein_coding	dimethylarginine dimethylaminohydrolase 1
chr3	145516356	145551460	+	145466530	145551460	A5SS	0.33	50	50	ENSMUST00000120310.2	ENSMUSG00000028194.16	Ddah1	chr3	protein_coding	dimethylarginine dimethylaminohydrolase 1
chr3	145630270	145633186	+	145630270	145636161	A3SS	0.5	50	50	ENSMUST00000029842.9	ENSMUSG00000028191.12	Bcl10	chr3	protein_coding	B cell leukemia/lymphoma 10
chr3	145644083;145644424	145644298;145644653	+	145644083	145644653	cassetteExon	0.5	100	100	ENSMUST00000039571.14	ENSMUSG00000036873.14	2410004B18Rik	chr3	protein_coding	RIKEN cDNA 2410004B18 gene
chr3	145644851	145646950	+	145644851	145649552	A3SS	0.33	50	50	ENSMUST00000039571.14	ENSMUSG00000036873.14	2410004B18Rik	chr3	protein_coding	RIKEN cDNA 2410004B18 gene
chr3	145644851	145649517	+	145644851	145649552	A3SS	0.33	50	50	ENSMUST00000039571.14	ENSMUSG00000036873.14	2410004B18Rik	chr3	protein_coding	RIKEN cDNA 2410004B18 gene
chr3	145644851;145647041	145646950;145649517	+	145644851	145649517	cassetteExon	0.5	100	100	ENSMUST00000152783.2	ENSMUSG00000036873.14	2410004B18Rik	chr3	protein_coding	RIKEN cDNA 2410004B18 gene
chr3	145644083	145644653	+	145644083	145644298	3pMXE	0.5	50	50	ENSMUST00000189656.2	ENSMUSG00000036873.14	2410004B18Rik	chr3	protein_coding	RIKEN cDNA 2410004B18 gene
chr3	145694924	145704218	+	145694924	145704221	A3SS	0.5	50	50	ENSMUST00000039517.11	ENSMUSG00000036863.13	Syde2	chr3	protein_coding	synapse defective 1, Rho GTPase, homolog 2 (C. elegans)
chr3	145699678	145704221	+	145694924	145704221	A5SS	0.5	50	50	ENSMUST00000039517.11	ENSMUSG00000036863.13	Syde2	chr3	protein_coding	synapse defective 1, Rho GTPase, homolog 2 (C. elegans)
chr3	145752466	145752905	-	145752466	145753851	A5SS	0.5	50	50	ENSMUST00000160285.2	ENSMUSG00000043020.14	Dnai3	chr3	protein_coding	dynein axonemal intermediate chain 3
chr3	145753981	145754094	-	145753981	145760310	A5SS	0.5	50	50	ENSMUST00000160285.2	ENSMUSG00000043020.14	Dnai3	chr3	protein_coding	dynein axonemal intermediate chain 3
chr3	145856075	145869290	+	145855761	145869290	A5SS	0.5	50	50	ENSMUST00000011152.14	ENSMUSG00000011008.14	Mcoln2	chr3	protein_coding	mucolipin 2
chr3	146110690;146120554	146120451;146123362	+	146110690	146123362	cassetteExon	0.5	100	100	ENSMUST00000106151.8	ENSMUSG00000036825.13	Ssx2ip	chr3	protein_coding	synovial sarcoma, X 2 interacting protein
chr3	146138372	146138728	+	146138372	146138731	A3SS	0.5	50	50	ENSMUST00000106151.8	ENSMUSG00000036825.13	Ssx2ip	chr3	protein_coding	synovial sarcoma, X 2 interacting protein
chr3	146110539	146123362	+	146110690	146123362	A5SS	0.25	50	50	ENSMUST00000106151.8	ENSMUSG00000036825.13	Ssx2ip	chr3	protein_coding	synovial sarcoma, X 2 interacting protein
chr3	146110831	146123362	+	146110690	146123362	A5SS	0.25	50	50	ENSMUST00000106151.8	ENSMUSG00000036825.13	Ssx2ip	chr3	protein_coding	synovial sarcoma, X 2 interacting protein
chr3	146110539;146120554	146120451;146123362	+	146110539	146123362	cassetteExon	0.5	100	100	ENSMUST00000106153.9	ENSMUSG00000036825.13	Ssx2ip	chr3	protein_coding	synovial sarcoma, X 2 interacting protein
chr3	146110831	146123362	+	146110539	146123362	A5SS	0.25	50	50	ENSMUST00000106153.9	ENSMUSG00000036825.13	Ssx2ip	chr3	protein_coding	synovial sarcoma, X 2 interacting protein
chr3	146110539	146120451	+	146110690	146120451	A5SS	0.5	50	50	ENSMUST00000106149.8	ENSMUSG00000036825.13	Ssx2ip	chr3	protein_coding	synovial sarcoma, X 2 interacting protein
chr3	146110539	146123362	+	146120554	146123362	A5SS&ES	0.25	50	50	ENSMUST00000106149.8	ENSMUSG00000036825.13	Ssx2ip	chr3	protein_coding	synovial sarcoma, X 2 interacting protein
chr3	146110831	146123362	+	146120554	146123362	A5SS&ES	0.25	50	50	ENSMUST00000106149.8	ENSMUSG00000036825.13	Ssx2ip	chr3	protein_coding	synovial sarcoma, X 2 interacting protein
chr3	146110690	146123362	+	146120554	146123362	A5SS&ES	0.25	50	50	ENSMUST00000149262.8	ENSMUSG00000036825.13	Ssx2ip	chr3	protein_coding	synovial sarcoma, X 2 interacting protein
chr3	146164595	146169654	+	146164595;146165595	146165434;146169654	ES	0.5	50	50	ENSMUST00000061937.13	ENSMUSG00000028189.13	Ctbs	chr3	protein_coding	chitobiase
chr3	146156385	146159918	+	146156385	146160102	A3SS	0.5	50	50	ENSMUST00000061937.13	ENSMUSG00000028189.13	Ctbs	chr3	protein_coding	chitobiase
chr3	146171751;146173959	146173861;146175380	-	146171751	146175380	cassetteExon	0.5	100	100	ENSMUST00000200488.5	ENSMUSG00000028188.14	Spata1	chr3	protein_coding	spermatogenesis associated 1
chr3	146163259	146168940	-	146163242	146168940	A3SS	0.5	50	50	ENSMUST00000200488.5	ENSMUSG00000028188.14	Spata1	chr3	protein_coding	spermatogenesis associated 1
chr3	146175558	146181949	-	146175558;146181136	146181011;146181949	ES	0.5	50	50	ENSMUST00000197980.5	ENSMUSG00000028188.14	Spata1	chr3	protein_coding	spermatogenesis associated 1
chr3	146187615	146193267	-	146187615;146193174	146192955;146193267	ES	0.5	50	50	ENSMUST00000197980.5	ENSMUSG00000028188.14	Spata1	chr3	protein_coding	spermatogenesis associated 1
chr3	146195638	146199427	-	146195672	146199427	A3SS	0.5	50	50	ENSMUST00000197980.5	ENSMUSG00000028188.14	Spata1	chr3	protein_coding	spermatogenesis associated 1
chr3	146187615	146188248	-	146187615	146192955	A5SS	0.33	50	50	ENSMUST00000197980.5	ENSMUSG00000028188.14	Spata1	chr3	protein_coding	spermatogenesis associated 1
chr3	146199598	146200711	-	146199598	146205410	A5SS	0.5	50	50	ENSMUST00000029839.11	ENSMUSG00000028188.14	Spata1	chr3	protein_coding	spermatogenesis associated 1
chr3	146175558	146181949	-	146181136	146181949	3pMXE	0.5	50	50	ENSMUST00000197684.2	ENSMUSG00000028188.14	Spata1	chr3	protein_coding	spermatogenesis associated 1
chr3	146187615	146188248	-	146187615	146193267	A5SS	0.33	50	50	ENSMUST00000197684.2	ENSMUSG00000028188.14	Spata1	chr3	protein_coding	spermatogenesis associated 1
chr3	146206101	146209015	+	146205775	146209015	A5SS	0.5	50	50	ENSMUST00000090031.12	ENSMUSG00000068523.13	Gng5	chr3	protein_coding	guanine nucleotide binding protein (G protein), gamma 5
chr3	146225198	146226440	-	146225198	146226924	A5SS	0.5	50	50	ENSMUST00000029838.11	ENSMUSG00000028187.11	Rpf1	chr3	protein_coding	ribosome production factor 1 homolog
chr3	146302988	146316025	+	146276318	146316025	A5SS	0.5	50	50	ENSMUST00000199489.5	ENSMUSG00000028186.15	Uox	chr3	protein_coding	urate oxidase
chr3	146302988	146318038	+	146316243	146318038	A5SS&ES	0.5	50	50	ENSMUST00000199489.5	ENSMUSG00000028186.15	Uox	chr3	protein_coding	urate oxidase
chr3	146302988	146318038	+	146302988;146316243	146316025;146318038	ES	0.5	50	50	ENSMUST00000029837.14	ENSMUSG00000028186.15	Uox	chr3	protein_coding	urate oxidase
chr3	146302988	146315734	+	146302988	146316025	A3SS	0.33	50	50	ENSMUST00000029837.14	ENSMUSG00000028186.15	Uox	chr3	protein_coding	urate oxidase
chr3	146331633	146333560	+	146331633	146333556	A3SS	0.5	50	50	ENSMUST00000029837.14	ENSMUSG00000028186.15	Uox	chr3	protein_coding	urate oxidase
chr3	146302988	146318038	+	146302988;146316243	146315734;146318038	ES	0.5	50	50	ENSMUST00000147409.2	ENSMUSG00000028186.15	Uox	chr3	protein_coding	urate oxidase
chr3	146302988	146315734	+	146302988	146318038	A3SS	0.33	50	50	ENSMUST00000121133.2	ENSMUSG00000028186.15	Uox	chr3	protein_coding	urate oxidase
chr3	146354419	146354501	+	146354206	146354501	A5SS	0.5	50	50	ENSMUST00000141199.8	ENSMUSG00000085810.8	Gm16325	chr3	lncRNA	predicted gene 16325
chr3	146352184	146368426	-	146352184	146356230	5pMXE	0.33	50	50	ENSMUST00000049703.6	ENSMUSG00000090202.2	4930503B20Rik	chr3	protein_coding	RIKEN cDNA 4930503B20 gene
chr3	146355449	146356230	-	146352184	146356230	A3SS	0.5	50	50	ENSMUST00000049703.6	ENSMUSG00000090202.2	4930503B20Rik	chr3	protein_coding	RIKEN cDNA 4930503B20 gene
chr3	146352184	146353009	-	146352184	146356230	A5SS	0.33	50	50	ENSMUST00000049703.6	ENSMUSG00000090202.2	4930503B20Rik	chr3	protein_coding	RIKEN cDNA 4930503B20 gene
chr3	146368537;146390884	146390688;146391191	-	146368537;146386602	146386517;146391191	MXE	0.5	100	100	ENSMUST00000125965.8	ENSMUSG00000048652.13	Samd13	chr3	protein_coding	sterile alpha motif domain containing 13
chr3	146386602;146390884	146390688;146391191	-	146386602	146391191	cassetteExon	0.5	100	100	ENSMUST00000125965.8	ENSMUSG00000048652.13	Samd13	chr3	protein_coding	sterile alpha motif domain containing 13
chr3	146368537;146390895	146390688;146391191	-	146368537;146386602	146386517;146391191	MXE	0.5	100	100	ENSMUST00000125965.8	ENSMUSG00000048652.13	Samd13	chr3	protein_coding	sterile alpha motif domain containing 13
chr3	146386602;146390895	146390688;146391191	-	146386602	146391191	cassetteExon	0.5	100	100	ENSMUST00000125965.8	ENSMUSG00000048652.13	Samd13	chr3	protein_coding	sterile alpha motif domain containing 13
chr3	146352184	146353009	-	146352184	146368426	A5SS	0.33	50	50	ENSMUST00000125965.8	ENSMUSG00000048652.13	Samd13	chr3	protein_coding	sterile alpha motif domain containing 13
chr3	146386602	146387797	-	146386602	146391191	A5SS	0.25	50	50	ENSMUST00000125965.8	ENSMUSG00000048652.13	Samd13	chr3	protein_coding	sterile alpha motif domain containing 13
chr3	146386602	146388074	-	146386602	146391191	A5SS	0.25	50	50	ENSMUST00000125965.8	ENSMUSG00000048652.13	Samd13	chr3	protein_coding	sterile alpha motif domain containing 13
chr3	146386602	146390688	-	146386602	146387797	5pMXE	0.25	50	50	ENSMUST00000124931.8	ENSMUSG00000048652.13	Samd13	chr3	protein_coding	sterile alpha motif domain containing 13
chr3	146386602	146388074	-	146386602	146387797	A5SS	0.25	50	50	ENSMUST00000124931.8	ENSMUSG00000048652.13	Samd13	chr3	protein_coding	sterile alpha motif domain containing 13
chr3	146386602	146390688	-	146386602	146388074	5pMXE	0.25	50	50	ENSMUST00000147113.2	ENSMUSG00000048652.13	Samd13	chr3	protein_coding	sterile alpha motif domain containing 13
chr3	146368537;146386602	146386517;146390688	-	146368537	146390688	cassetteExon	0.5	100	100	ENSMUST00000197989.2	ENSMUSG00000048652.13	Samd13	chr3	protein_coding	sterile alpha motif domain containing 13
chr3	146390895	146391191	-	146390884	146391191	A3SS	0.33	50	50	ENSMUST00000197989.2	ENSMUSG00000048652.13	Samd13	chr3	protein_coding	sterile alpha motif domain containing 13
chr3	146368537	146390688	-	146386602	146390688	3pMXE	0.5	50	50	ENSMUST00000144837.2	ENSMUSG00000048652.13	Samd13	chr3	protein_coding	sterile alpha motif domain containing 13
chr3	146463523	146470281	-	146463523	146518393	A5SS	0.16	50	50	ENSMUST00000102515.10	ENSMUSG00000005034.16	Prkacb	chr3	protein_coding	protein kinase, cAMP dependent, catalytic, beta
chr3	146463523	146475689	-	146463523	146518393	A5SS	0.16	50	50	ENSMUST00000102515.10	ENSMUSG00000005034.16	Prkacb	chr3	protein_coding	protein kinase, cAMP dependent, catalytic, beta
chr3	146463523	146476271	-	146463523	146518393	A5SS	0.16	50	50	ENSMUST00000102515.10	ENSMUSG00000005034.16	Prkacb	chr3	protein_coding	protein kinase, cAMP dependent, catalytic, beta
chr3	146463523	146486902	-	146463523	146518393	A5SS	0.16	50	50	ENSMUST00000102515.10	ENSMUSG00000005034.16	Prkacb	chr3	protein_coding	protein kinase, cAMP dependent, catalytic, beta
chr3	146463523	146494471	-	146463523	146518393	A5SS	0.16	50	50	ENSMUST00000102515.10	ENSMUSG00000005034.16	Prkacb	chr3	protein_coding	protein kinase, cAMP dependent, catalytic, beta
chr3	146463523	146476271	-	146463523	146475689	5pMXE	0.16	50	50	ENSMUST00000106137.8	ENSMUSG00000005034.16	Prkacb	chr3	protein_coding	protein kinase, cAMP dependent, catalytic, beta
chr3	146463523	146486902	-	146463523	146475689	5pMXE	0.16	50	50	ENSMUST00000106137.8	ENSMUSG00000005034.16	Prkacb	chr3	protein_coding	protein kinase, cAMP dependent, catalytic, beta
chr3	146463523	146494471	-	146463523	146475689	5pMXE	0.16	50	50	ENSMUST00000106137.8	ENSMUSG00000005034.16	Prkacb	chr3	protein_coding	protein kinase, cAMP dependent, catalytic, beta
chr3	146463523	146470281	-	146463523	146475689	A5SS	0.16	50	50	ENSMUST00000106137.8	ENSMUSG00000005034.16	Prkacb	chr3	protein_coding	protein kinase, cAMP dependent, catalytic, beta
chr3	146463523	146486902	-	146463523	146476271	5pMXE	0.16	50	50	ENSMUST00000106138.8	ENSMUSG00000005034.16	Prkacb	chr3	protein_coding	protein kinase, cAMP dependent, catalytic, beta
chr3	146463523	146494471	-	146463523	146476271	5pMXE	0.16	50	50	ENSMUST00000106138.8	ENSMUSG00000005034.16	Prkacb	chr3	protein_coding	protein kinase, cAMP dependent, catalytic, beta
chr3	146463523	146470281	-	146463523	146476271	A5SS	0.16	50	50	ENSMUST00000106138.8	ENSMUSG00000005034.16	Prkacb	chr3	protein_coding	protein kinase, cAMP dependent, catalytic, beta
chr3	146463523	146494471	-	146463523	146486902	5pMXE	0.16	50	50	ENSMUST00000005164.12	ENSMUSG00000005034.16	Prkacb	chr3	protein_coding	protein kinase, cAMP dependent, catalytic, beta
chr3	146463523	146470281	-	146463523	146486902	A5SS	0.16	50	50	ENSMUST00000005164.12	ENSMUSG00000005034.16	Prkacb	chr3	protein_coding	protein kinase, cAMP dependent, catalytic, beta
chr3	146463523	146494471	-	146463523	146470281	5pMXE	0.16	50	50	ENSMUST00000199722.5	ENSMUSG00000005034.16	Prkacb	chr3	protein_coding	protein kinase, cAMP dependent, catalytic, beta
chr3	146645932;146647648	146647574;146649761	+	146645932	146649761	cassetteExon	0.5	100	100	ENSMUST00000170055.8	ENSMUSG00000036745.16	Ttll7	chr3	protein_coding	tubulin tyrosine ligase-like family, member 7
chr3	146649963	146650849	+	146649978	146650849	A5SS	0.5	50	50	ENSMUST00000170055.8	ENSMUSG00000036745.16	Ttll7	chr3	protein_coding	tubulin tyrosine ligase-like family, member 7
chr3	148523564	148526916	-	148523564;148526104	148526087;148526916	ES	0.5	50	50	ENSMUST00000198139.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148532169	148534113	-	148532169;148533221	148533177;148534113	ES	0.5	50	50	ENSMUST00000198139.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564;148526661	148526609;148528591	-	148523564;148527044	148526087;148528591	MXE	0.5	100	100	ENSMUST00000198139.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564;148526690	148526609;148528591	-	148523564;148527044	148526087;148528591	MXE	0.5	100	100	ENSMUST00000198139.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148532169;148532874	148532848;148533177	-	148532169	148533177	cassetteExon	0.5	100	100	ENSMUST00000198139.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564	148524270	-	148523564	148526087	A5SS	0.12	50	50	ENSMUST00000198139.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564	148524284	-	148523564	148526087	A5SS	0.12	50	50	ENSMUST00000198139.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564	148528624	-	148523564	148526087	A5SS&ES	0.12	50	50	ENSMUST00000198139.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148527044	148528624	-	148527044	148528591	A5SS	0.5	50	50	ENSMUST00000198139.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564	148528591	-	148523564;148527044	148526916;148528591	ES	0.25	50	50	ENSMUST00000106128.7	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148552668	148556472	-	148552668;148555440	148555402;148556472	ES	0.5	50	50	ENSMUST00000106128.7	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564;148526661	148526609;148528591	-	148523564;148527044	148526916;148528591	MXE	0.5	100	100	ENSMUST00000106128.7	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564;148526690	148526609;148528591	-	148523564;148527044	148526916;148528591	MXE	0.5	100	100	ENSMUST00000106128.7	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148558298	148564369	-	148558496	148564369	A3SS	0.5	50	50	ENSMUST00000106128.7	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564	148524270	-	148523564	148526916	A5SS	0.12	50	50	ENSMUST00000106128.7	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564	148524284	-	148523564	148526916	A5SS	0.12	50	50	ENSMUST00000106128.7	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564	148528624	-	148523564	148526916	A5SS&ES	0.12	50	50	ENSMUST00000106128.7	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564	148528591	-	148523564;148526661	148526609;148528591	ES	0.25	50	50	ENSMUST00000200216.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564;148524322	148524270;148526609	-	148523564	148526609	cassetteExon	0.5	100	100	ENSMUST00000200216.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564;148524322	148524284;148526609	-	148523564	148526609	cassetteExon	0.5	100	100	ENSMUST00000200216.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148526690	148528591	-	148526661	148528591	A3SS	0.25	50	50	ENSMUST00000200216.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564	148526087	-	148523564	148526609	A5SS	0.12	50	50	ENSMUST00000200216.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564	148528624	-	148523564	148526609	A5SS&ES	0.12	50	50	ENSMUST00000200216.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148565169	148571236	-	148565169;148566074	148566063;148571236	ES	0.5	50	50	ENSMUST00000197567.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564;148527044	148526916;148528591	-	148523564;148526661	148524270;148528591	MXE	0.5	100	100	ENSMUST00000196526.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148532169;148533221	148532848;148534113	-	148532169	148534113	cassetteExon	0.5	100	100	ENSMUST00000196526.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564	148524284	-	148523564	148524270	A5SS	0.12	50	50	ENSMUST00000196526.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564	148528624	-	148523564	148524270	A5SS&ES	0.12	50	50	ENSMUST00000196526.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148524322	148526053	-	148524322	148526609	A5SS	0.5	50	50	ENSMUST00000196526.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148660371	148694226	-	148660371	148696076	A5SS	0.5	50	50	ENSMUST00000196526.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564	148529332	-	148523564;148528687	148528591;148529332	ES	0.5	50	50	ENSMUST00000200543.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564;148526690	148526609;148528591	-	148523564	148528591	cassetteExon	0.5	100	100	ENSMUST00000200543.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564;148527044	148526609;148528591	-	148523564	148528591	cassetteExon	0.5	100	100	ENSMUST00000200543.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564	148524270	-	148523564	148528591	A5SS	0.12	50	50	ENSMUST00000200543.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564	148524284	-	148523564	148528591	A5SS	0.12	50	50	ENSMUST00000200543.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564	148526087	-	148523564	148528591	A5SS	0.12	50	50	ENSMUST00000200543.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564	148528624	-	148523564	148528591	A5SS	0.12	50	50	ENSMUST00000200543.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564;148528687	148528624;148529332	-	148523564	148529332	cassetteExon	0.5	100	100	ENSMUST00000200154.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564	148524270	-	148523564	148529332	A5SS	0.12	50	50	ENSMUST00000200154.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564	148524284	-	148523564	148529332	A5SS	0.12	50	50	ENSMUST00000200154.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564	148526087	-	148523564	148529332	A5SS	0.12	50	50	ENSMUST00000200154.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564	148526609	-	148523564	148529332	A5SS	0.12	50	50	ENSMUST00000200154.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564	148526916	-	148523564	148529332	A5SS	0.12	50	50	ENSMUST00000200154.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564	148528624	-	148523564;148527044	148526916;148528624	ES	0.5	50	50	ENSMUST00000199059.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564	148526609	-	148523564	148526916	A5SS	0.12	50	50	ENSMUST00000199059.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564	148528591	-	148523564	148526916	A5SS&ES	0.12	50	50	ENSMUST00000199059.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564;148527044	148526609;148528624	-	148523564	148528624	cassetteExon	0.5	100	100	ENSMUST00000197925.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564	148524284	-	148523564	148528624	A5SS	0.12	50	50	ENSMUST00000197925.5	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148523564	148526609	-	148523564	148524284	A5SS&ES	0.12	50	50	ENSMUST00000200456.2	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	148532169	148534113	-	148533221	148534113	3pMXE	0.5	50	50	ENSMUST00000197521.2	ENSMUSG00000028184.13	Adgrl2	chr3	protein_coding	adhesion G protein-coupled receptor L2
chr3	149020458	149150739	-	149020458;149072992	149072869;149150739	ES	0.5	50	50	ENSMUST00000199007.5	ENSMUSG00000106515.5	Gm30382	chr3	lncRNA	predicted gene, 30382
chr3	148990793	149020371	-	148991468	149020371	A3SS	0.5	50	50	ENSMUST00000199007.5	ENSMUSG00000106515.5	Gm30382	chr3	lncRNA	predicted gene, 30382
chr3	149020458	149029408	-	149020458	149072869	A5SS	0.33	50	50	ENSMUST00000199007.5	ENSMUSG00000106515.5	Gm30382	chr3	lncRNA	predicted gene, 30382
chr3	149020458	149150739	-	149020458	149029408	5pMXE	0.33	50	50	ENSMUST00000196330.2	ENSMUSG00000106515.5	Gm30382	chr3	lncRNA	predicted gene, 30382
chr3	149040628	149042270	+	149011063	149042270	A5SS	0.5	50	50	ENSMUST00000199980.2	ENSMUSG00000105797.2	Gm5149	chr3	lncRNA	predicted gene 5149
chr3	150294515	150298841	+	150294515	150315726	A3SS	0.5	50	50	ENSMUST00000198573.2	ENSMUSG00000105190.2	Gm43470	chr3	lncRNA	predicted gene 43470
chr3	150999926;151000776	151000510;151001522	+	150999926	151001522	cassetteExon	0.5	100	100	ENSMUST00000196524.2	ENSMUSG00000106157.2	4930555A03Rik	chr3	lncRNA	RIKEN cDNA 4930555A03 gene
chr3	150999926;151000776	151000515;151001522	+	150999926	151001522	cassetteExon	0.5	100	100	ENSMUST00000196524.2	ENSMUSG00000106157.2	4930555A03Rik	chr3	lncRNA	RIKEN cDNA 4930555A03 gene
chr3	150999926	151000510	+	150999926	151000515	A3SS	0.33	50	50	ENSMUST00000196052.2	ENSMUSG00000106157.2	4930555A03Rik	chr3	lncRNA	RIKEN cDNA 4930555A03 gene
chr3	150999926	151001522	+	150999926	151000515	A3SS	0.33	50	50	ENSMUST00000196052.2	ENSMUSG00000106157.2	4930555A03Rik	chr3	lncRNA	RIKEN cDNA 4930555A03 gene
chr3	150999926	151001522	+	150999926	151000510	3pMXE	0.33	50	50	ENSMUST00000197810.2	ENSMUSG00000106157.2	4930555A03Rik	chr3	lncRNA	RIKEN cDNA 4930555A03 gene
chr3	150999926	151001522	+	151000776	151001522	5pMXE	0.5	50	50	ENSMUST00000196589.2	ENSMUSG00000106157.2	4930555A03Rik	chr3	lncRNA	RIKEN cDNA 4930555A03 gene
chr3	151145024	151203464	+	151145024;151198063	151197914;151203464	ES	0.33	50	50	ENSMUST00000046977.12	ENSMUSG00000039167.13	Adgrl4	chr3	protein_coding	adhesion G protein-coupled receptor L4
chr3	151145024;151179984	151179855;151197914	+	151145024	151197914	cassetteExon	0.5	100	100	ENSMUST00000046977.12	ENSMUSG00000039167.13	Adgrl4	chr3	protein_coding	adhesion G protein-coupled receptor L4
chr3	151205862	151205946	+	151205862	151205966	A3SS	0.5	50	50	ENSMUST00000046977.12	ENSMUSG00000039167.13	Adgrl4	chr3	protein_coding	adhesion G protein-coupled receptor L4
chr3	151223444	151227532	+	151223444	151246598	A3SS	0.5	50	50	ENSMUST00000046977.12	ENSMUSG00000039167.13	Adgrl4	chr3	protein_coding	adhesion G protein-coupled receptor L4
chr3	151143987	151144875	+	151143641	151144875	A5SS	0.5	50	50	ENSMUST00000046977.12	ENSMUSG00000039167.13	Adgrl4	chr3	protein_coding	adhesion G protein-coupled receptor L4
chr3	151200026	151203464	+	151198063	151203464	A5SS	0.33	50	50	ENSMUST00000046977.12	ENSMUSG00000039167.13	Adgrl4	chr3	protein_coding	adhesion G protein-coupled receptor L4
chr3	151145024	151179855	+	151145024	151203464	A3SS	0.33	50	50	ENSMUST00000196970.3	ENSMUSG00000039167.13	Adgrl4	chr3	protein_coding	adhesion G protein-coupled receptor L4
chr3	151200026	151203464	+	151145024	151203464	A5SS	0.33	50	50	ENSMUST00000196970.3	ENSMUSG00000039167.13	Adgrl4	chr3	protein_coding	adhesion G protein-coupled receptor L4
chr3	151438190	151444957	-	151438190;151443960	151443860;151444957	ES	0.5	50	50	ENSMUST00000029671.9	ENSMUSG00000028037.14	Ifi44	chr3	protein_coding	interferon-induced protein 44
chr3	151451274	151453255	-	151451274;151451625	151451430;151453255	ES	0.5	50	50	ENSMUST00000029671.9	ENSMUSG00000028037.14	Ifi44	chr3	protein_coding	interferon-induced protein 44
chr3	151453291	151455473	-	151453291;151455281	151454782;151455473	ES	0.33	50	50	ENSMUST00000029671.9	ENSMUSG00000028037.14	Ifi44	chr3	protein_coding	interferon-induced protein 44
chr3	151454886	151455473	-	151455281	151455473	A3SS	0.33	50	50	ENSMUST00000029671.9	ENSMUSG00000028037.14	Ifi44	chr3	protein_coding	interferon-induced protein 44
chr3	151453291;151454886	151454782;151455473	-	151453291	151455473	cassetteExon	0.5	100	100	ENSMUST00000149919.8	ENSMUSG00000028037.14	Ifi44	chr3	protein_coding	interferon-induced protein 44
chr3	151453291	151455473	-	151455281	151455473	A3SS	0.33	50	50	ENSMUST00000133888.2	ENSMUSG00000028037.14	Ifi44	chr3	protein_coding	interferon-induced protein 44
chr3	151451274	151453255	-	151451625	151453255	3pMXE	0.5	50	50	ENSMUST00000127733.2	ENSMUSG00000028037.14	Ifi44	chr3	protein_coding	interferon-induced protein 44
chr3	151507563	151539721	-	151507563	151540709	A5SS	0.5	50	50	ENSMUST00000029670.7	ENSMUSG00000028036.7	Ptgfr	chr3	protein_coding	prostaglandin F receptor
chr3	151813684	151833673	-	151813684	151813844	5pMXE	0.5	50	50	ENSMUST00000152283.8	ENSMUSG00000039131.16	Gipc2	chr3	protein_coding	GIPC PDZ domain containing family, member 2
chr3	151808337	151812468	-	151808337	151813578	A5SS	0.5	50	50	ENSMUST00000152283.8	ENSMUSG00000039131.16	Gipc2	chr3	protein_coding	GIPC PDZ domain containing family, member 2
chr3	151836128	151843210	-	151833853	151843210	A3SS	0.5	50	50	ENSMUST00000046614.10	ENSMUSG00000039131.16	Gipc2	chr3	protein_coding	GIPC PDZ domain containing family, member 2
chr3	151843395	151852329	-	151843395	151871285	A5SS	0.5	50	50	ENSMUST00000046614.10	ENSMUSG00000039131.16	Gipc2	chr3	protein_coding	GIPC PDZ domain containing family, member 2
chr3	151899255	151915472	-	151885283	151915472	A3SS	0.2	50	50	ENSMUST00000134701.2	ENSMUSG00000028035.14	Dnajb4	chr3	protein_coding	DnaJ heat shock protein family (Hsp40) member B4
chr3	151899301	151915472	-	151885283	151915472	A3SS	0.2	50	50	ENSMUST00000134701.2	ENSMUSG00000028035.14	Dnajb4	chr3	protein_coding	DnaJ heat shock protein family (Hsp40) member B4
chr3	151909540	151915472	-	151885283	151915472	A3SS	0.2	50	50	ENSMUST00000134701.2	ENSMUSG00000028035.14	Dnajb4	chr3	protein_coding	DnaJ heat shock protein family (Hsp40) member B4
chr3	151914583	151915472	-	151885283	151915472	A3SS	0.2	50	50	ENSMUST00000134701.2	ENSMUSG00000028035.14	Dnajb4	chr3	protein_coding	DnaJ heat shock protein family (Hsp40) member B4
chr3	151899301	151915472	-	151899255	151915472	A3SS	0.25	50	50	ENSMUST00000144950.8	ENSMUSG00000028035.14	Dnajb4	chr3	protein_coding	DnaJ heat shock protein family (Hsp40) member B4
chr3	151909540	151915472	-	151899255	151915472	A3SS	0.25	50	50	ENSMUST00000144950.8	ENSMUSG00000028035.14	Dnajb4	chr3	protein_coding	DnaJ heat shock protein family (Hsp40) member B4
chr3	151914583	151915472	-	151899255	151915472	A3SS	0.25	50	50	ENSMUST00000144950.8	ENSMUSG00000028035.14	Dnajb4	chr3	protein_coding	DnaJ heat shock protein family (Hsp40) member B4
chr3	151899255	151900036	-	151899255	151915472	A5SS	0.33	50	50	ENSMUST00000144950.8	ENSMUSG00000028035.14	Dnajb4	chr3	protein_coding	DnaJ heat shock protein family (Hsp40) member B4
chr3	151899255	151900687	-	151899255	151915472	A5SS	0.33	50	50	ENSMUST00000144950.8	ENSMUSG00000028035.14	Dnajb4	chr3	protein_coding	DnaJ heat shock protein family (Hsp40) member B4
chr3	151899301	151915472	-	151909540	151915472	A3SS&ES	0.25	50	50	ENSMUST00000029669.4	ENSMUSG00000028035.14	Dnajb4	chr3	protein_coding	DnaJ heat shock protein family (Hsp40) member B4
chr3	151914583	151915472	-	151909540	151915472	A3SS	0.25	50	50	ENSMUST00000029669.4	ENSMUSG00000028035.14	Dnajb4	chr3	protein_coding	DnaJ heat shock protein family (Hsp40) member B4
chr3	151899255	151900687	-	151899255	151900036	A5SS&ES	0.33	50	50	ENSMUST00000029669.4	ENSMUSG00000028035.14	Dnajb4	chr3	protein_coding	DnaJ heat shock protein family (Hsp40) member B4
chr3	151899301	151915472	-	151914583	151915472	A3SS&ES	0.25	50	50	ENSMUST00000153355.6	ENSMUSG00000028035.14	Dnajb4	chr3	protein_coding	DnaJ heat shock protein family (Hsp40) member B4
chr3	151919704;151920524	151920462;151921229	+	151919704	151921229	cassetteExon	0.5	100	100	ENSMUST00000166984.8	ENSMUSG00000028034.16	Fubp1	chr3	protein_coding	far upstream element (FUSE) binding protein 1
chr3	151923085	151923469	+	151923085	151923472	A3SS	0.5	50	50	ENSMUST00000166984.8	ENSMUSG00000028034.16	Fubp1	chr3	protein_coding	far upstream element (FUSE) binding protein 1
chr3	151929002	151929626	+	151929002	151931717	A3SS	0.5	50	50	ENSMUST00000166984.8	ENSMUSG00000028034.16	Fubp1	chr3	protein_coding	far upstream element (FUSE) binding protein 1
chr3	151937659	151937892	+	151937659	151938032	A3SS	0.33	50	50	ENSMUST00000166984.8	ENSMUSG00000028034.16	Fubp1	chr3	protein_coding	far upstream element (FUSE) binding protein 1
chr3	151937659	151940161	+	151937659	151938032	A3SS	0.33	50	50	ENSMUST00000166984.8	ENSMUSG00000028034.16	Fubp1	chr3	protein_coding	far upstream element (FUSE) binding protein 1
chr3	151931845	151933808	+	151931854	151933808	A5SS	0.5	50	50	ENSMUST00000166984.8	ENSMUSG00000028034.16	Fubp1	chr3	protein_coding	far upstream element (FUSE) binding protein 1
chr3	151937659	151940161	+	151937659	151937892	3pMXE	0.33	50	50	ENSMUST00000200524.5	ENSMUSG00000028034.16	Fubp1	chr3	protein_coding	far upstream element (FUSE) binding protein 1
chr3	151958766	151960922	-	151958766;151959440	151959249;151960922	ES	0.33	50	50	ENSMUST00000199470.5	ENSMUSG00000039103.13	Nexn	chr3	protein_coding	nexilin
chr3	151961002	151971854	-	151961002	151971350	5pMXE	0.2	50	50	ENSMUST00000199470.5	ENSMUSG00000039103.13	Nexn	chr3	protein_coding	nexilin
chr3	151949660;151954005	151953570;151958445	-	151949660;151952911	151952723;151958445	MXE	0.5	100	100	ENSMUST00000199470.5	ENSMUSG00000039103.13	Nexn	chr3	protein_coding	nexilin
chr3	151952911;151954005	151953570;151958445	-	151952911	151958445	cassetteExon	0.5	100	100	ENSMUST00000199470.5	ENSMUSG00000039103.13	Nexn	chr3	protein_coding	nexilin
chr3	151955338	151958445	-	151952911	151958445	A3SS	0.33	50	50	ENSMUST00000199470.5	ENSMUSG00000039103.13	Nexn	chr3	protein_coding	nexilin
chr3	151961002	151967128	-	151961002	151971350	A5SS	0.2	50	50	ENSMUST00000199470.5	ENSMUSG00000039103.13	Nexn	chr3	protein_coding	nexilin
chr3	151961002	151968101	-	151961002	151971350	A5SS	0.2	50	50	ENSMUST00000199470.5	ENSMUSG00000039103.13	Nexn	chr3	protein_coding	nexilin
chr3	151961002	151968915	-	151961002	151971350	A5SS	0.2	50	50	ENSMUST00000199470.5	ENSMUSG00000039103.13	Nexn	chr3	protein_coding	nexilin
chr3	151949660	151953570	-	151949660;151952911	151952723;151953570	ES	0.5	50	50	ENSMUST00000046045.13	ENSMUSG00000039103.13	Nexn	chr3	protein_coding	nexilin
chr3	151954005	151958445	-	151954005;151955338	151955297;151958445	ES	0.33	50	50	ENSMUST00000046045.13	ENSMUSG00000039103.13	Nexn	chr3	protein_coding	nexilin
chr3	151958593	151960922	-	151958593;151958766	151958688;151960922	ES	0.33	50	50	ENSMUST00000046045.13	ENSMUSG00000039103.13	Nexn	chr3	protein_coding	nexilin
chr3	151961002	151967128	-	151961002	151971854	A5SS	0.2	50	50	ENSMUST00000046045.13	ENSMUSG00000039103.13	Nexn	chr3	protein_coding	nexilin
chr3	151961002	151968101	-	151961002	151971854	A5SS	0.2	50	50	ENSMUST00000046045.13	ENSMUSG00000039103.13	Nexn	chr3	protein_coding	nexilin
chr3	151961002	151968915	-	151961002	151971854	A5SS	0.2	50	50	ENSMUST00000046045.13	ENSMUSG00000039103.13	Nexn	chr3	protein_coding	nexilin
chr3	151959440	151960922	-	151958593	151960922	A3SS	0.33	50	50	ENSMUST00000196815.5	ENSMUSG00000039103.13	Nexn	chr3	protein_coding	nexilin
chr3	151961002	151967128	-	151961002	151968915	A5SS	0.2	50	50	ENSMUST00000198648.5	ENSMUSG00000039103.13	Nexn	chr3	protein_coding	nexilin
chr3	151961002	151968101	-	151961002	151968915	A5SS	0.2	50	50	ENSMUST00000198648.5	ENSMUSG00000039103.13	Nexn	chr3	protein_coding	nexilin
chr3	151961002	151968101	-	151961002	151967128	5pMXE	0.2	50	50	ENSMUST00000196504.5	ENSMUSG00000039103.13	Nexn	chr3	protein_coding	nexilin
chr3	151958593	151960922	-	151958593	151958688	5pMXE	0.5	50	50	ENSMUST00000199752.2	ENSMUSG00000039103.13	Nexn	chr3	protein_coding	nexilin
chr3	152026380	152039118	-	152026380;152028113	152027987;152039118	ES	0.5	50	50	ENSMUST00000073089.13	ENSMUSG00000054942.14	Miga1	chr3	protein_coding	mitoguardin 1
chr3	151994779;151996546	151996097;152002754	-	151994779	152002754	cassetteExon	0.5	100	100	ENSMUST00000068243.11	ENSMUSG00000054942.14	Miga1	chr3	protein_coding	mitoguardin 1
chr3	151994779	152002754	-	151996546	152002754	3pMXE	0.5	50	50	ENSMUST00000199443.2	ENSMUSG00000054942.14	Miga1	chr3	protein_coding	mitoguardin 1
chr3	152067639;152068638	152068517;152069615	+	152067639	152069615	cassetteExon	0.5	100	100	ENSMUST00000117492.9	ENSMUSG00000025437.16	Usp33	chr3	protein_coding	ubiquitin specific peptidase 33
chr3	152074287;152074488	152074410;152075914	+	152074287	152075914	cassetteExon	0.5	100	100	ENSMUST00000117492.9	ENSMUSG00000025437.16	Usp33	chr3	protein_coding	ubiquitin specific peptidase 33
chr3	152063836	152064278	+	152063836	152064273	A3SS	0.5	50	50	ENSMUST00000117492.9	ENSMUSG00000025437.16	Usp33	chr3	protein_coding	ubiquitin specific peptidase 33
chr3	152080426	152080528	+	152080426	152080552	A3SS	0.5	50	50	ENSMUST00000117492.9	ENSMUSG00000025437.16	Usp33	chr3	protein_coding	ubiquitin specific peptidase 33
chr3	152087802	152088548	+	152087521	152088548	A5SS	0.5	50	50	ENSMUST00000117492.9	ENSMUSG00000025437.16	Usp33	chr3	protein_coding	ubiquitin specific peptidase 33
chr3	152095468	152097287	+	152095480	152097287	A5SS	0.5	50	50	ENSMUST00000117492.9	ENSMUSG00000025437.16	Usp33	chr3	protein_coding	ubiquitin specific peptidase 33
chr3	152125777	152152436	+	152125777;152128408	152128255;152152436	ES	0.2	50	50	ENSMUST00000106103.8	ENSMUSG00000039068.17	Zzz3	chr3	protein_coding	zinc finger, ZZ domain containing 3
chr3	152128408;152143527	152143375;152152436	+	152128408	152152436	cassetteExon	0.5	100	100	ENSMUST00000106103.8	ENSMUSG00000039068.17	Zzz3	chr3	protein_coding	zinc finger, ZZ domain containing 3
chr3	152128408;152152326	152152266;152152436	+	152128408	152152436	cassetteExon	0.5	100	100	ENSMUST00000106103.8	ENSMUSG00000039068.17	Zzz3	chr3	protein_coding	zinc finger, ZZ domain containing 3
chr3	152128408	152132914	+	152128408	152152436	A3SS	0.25	50	50	ENSMUST00000106103.8	ENSMUSG00000039068.17	Zzz3	chr3	protein_coding	zinc finger, ZZ domain containing 3
chr3	152154563	152154653	+	152154563	152154650	A3SS	0.5	50	50	ENSMUST00000106103.8	ENSMUSG00000039068.17	Zzz3	chr3	protein_coding	zinc finger, ZZ domain containing 3
chr3	152101775	152125652	+	152101220	152125652	A5SS	0.33	50	50	ENSMUST00000106103.8	ENSMUSG00000039068.17	Zzz3	chr3	protein_coding	zinc finger, ZZ domain containing 3
chr3	152102398	152125652	+	152101220	152125652	A5SS	0.33	50	50	ENSMUST00000106103.8	ENSMUSG00000039068.17	Zzz3	chr3	protein_coding	zinc finger, ZZ domain containing 3
chr3	152134469	152152436	+	152128408	152152436	A5SS	0.2	50	50	ENSMUST00000106103.8	ENSMUSG00000039068.17	Zzz3	chr3	protein_coding	zinc finger, ZZ domain containing 3
chr3	152128408	152143375	+	152128408	152132914	3pMXE	0.25	50	50	ENSMUST00000138115.8	ENSMUSG00000039068.17	Zzz3	chr3	protein_coding	zinc finger, ZZ domain containing 3
chr3	152128408	152152266	+	152128408	152132914	3pMXE	0.25	50	50	ENSMUST00000138115.8	ENSMUSG00000039068.17	Zzz3	chr3	protein_coding	zinc finger, ZZ domain containing 3
chr3	152128408	152152436	+	152128408;152134469	152132914;152152436	ES	0.2	50	50	ENSMUST00000106100.9	ENSMUSG00000039068.17	Zzz3	chr3	protein_coding	zinc finger, ZZ domain containing 3
chr3	152128408;152143527	152143375;152152436	+	152128408;152134469	152132914;152152436	MXE	0.5	100	100	ENSMUST00000106100.9	ENSMUSG00000039068.17	Zzz3	chr3	protein_coding	zinc finger, ZZ domain containing 3
chr3	152128408;152152326	152152266;152152436	+	152128408;152134469	152132914;152152436	MXE	0.5	100	100	ENSMUST00000106100.9	ENSMUSG00000039068.17	Zzz3	chr3	protein_coding	zinc finger, ZZ domain containing 3
chr3	152102398	152125652	+	152101775	152125652	A5SS	0.33	50	50	ENSMUST00000106100.9	ENSMUSG00000039068.17	Zzz3	chr3	protein_coding	zinc finger, ZZ domain containing 3
chr3	152128408;152152326	152152266;152152436	+	152128408;152143527	152143375;152152436	MXE	0.5	100	100	ENSMUST00000150802.8	ENSMUSG00000039068.17	Zzz3	chr3	protein_coding	zinc finger, ZZ domain containing 3
chr3	152134469	152152436	+	152143527	152152436	A5SS&ES	0.2	50	50	ENSMUST00000150802.8	ENSMUSG00000039068.17	Zzz3	chr3	protein_coding	zinc finger, ZZ domain containing 3
chr3	152134469	152152436	+	152152326	152152436	A5SS&ES	0.2	50	50	ENSMUST00000197987.5	ENSMUSG00000039068.17	Zzz3	chr3	protein_coding	zinc finger, ZZ domain containing 3
chr3	152134469	152152436	+	152125777	152152436	A5SS	0.2	50	50	ENSMUST00000200570.5	ENSMUSG00000039068.17	Zzz3	chr3	protein_coding	zinc finger, ZZ domain containing 3
chr3	152143527	152152436	+	152125777	152152436	A5SS	0.2	50	50	ENSMUST00000200570.5	ENSMUSG00000039068.17	Zzz3	chr3	protein_coding	zinc finger, ZZ domain containing 3
chr3	152152326	152152436	+	152125777	152152436	A5SS	0.2	50	50	ENSMUST00000200570.5	ENSMUSG00000039068.17	Zzz3	chr3	protein_coding	zinc finger, ZZ domain containing 3
chr3	152169658	152178394	-	152169653	152178394	A3SS	0.5	50	50	ENSMUST00000045262.11	ENSMUSG00000039058.12	Ak5	chr3	protein_coding	adenylate kinase 5
chr3	152443958	152448126	+	152443958;152445877	152445766;152448126	ES	0.25	50	50	ENSMUST00000159899.8	ENSMUSG00000039047.18	Pigk	chr3	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class K
chr3	152450461	152472076	+	152450461;152453410	152453238;152472076	ES	0.33	50	50	ENSMUST00000159899.8	ENSMUSG00000039047.18	Pigk	chr3	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class K
chr3	152472160	152528264	+	152472160	152491033	3pMXE	0.33	50	50	ENSMUST00000159899.8	ENSMUSG00000039047.18	Pigk	chr3	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class K
chr3	152472160	152535233	+	152472160	152491033	3pMXE	0.33	50	50	ENSMUST00000159899.8	ENSMUSG00000039047.18	Pigk	chr3	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class K
chr3	152445877;152446530	152446390;152448126	+	152445877	152448126	cassetteExon	0.5	100	100	ENSMUST00000159899.8	ENSMUSG00000039047.18	Pigk	chr3	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class K
chr3	152443731	152443823	+	152428213	152443823	A5SS	0.5	50	50	ENSMUST00000159899.8	ENSMUSG00000039047.18	Pigk	chr3	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class K
chr3	152469346	152472076	+	152453410	152472076	A5SS	0.33	50	50	ENSMUST00000159899.8	ENSMUSG00000039047.18	Pigk	chr3	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class K
chr3	152443958	152448126	+	152443958	152445766	3pMXE	0.5	50	50	ENSMUST00000162835.8	ENSMUSG00000039047.18	Pigk	chr3	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class K
chr3	152547539	152607727	+	152547539	152548097	3pMXE	0.5	50	50	ENSMUST00000162642.8	ENSMUSG00000039047.18	Pigk	chr3	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class K
chr3	152472160	152535233	+	152472160	152528264	A3SS&ES	0.33	50	50	ENSMUST00000162642.8	ENSMUSG00000039047.18	Pigk	chr3	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class K
chr3	152535548	152547401	+	152535548	152545713	A3SS	0.5	50	50	ENSMUST00000162642.8	ENSMUSG00000039047.18	Pigk	chr3	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class K
chr3	152428213;152443958	152443823;152448126	+	152428213	152448126	cassetteExon	0.5	100	100	ENSMUST00000200224.5	ENSMUSG00000039047.18	Pigk	chr3	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class K
chr3	152445877	152448126	+	152428213	152448126	A5SS	0.25	50	50	ENSMUST00000200224.5	ENSMUSG00000039047.18	Pigk	chr3	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class K
chr3	152446530	152448126	+	152428213	152448126	A5SS	0.25	50	50	ENSMUST00000200224.5	ENSMUSG00000039047.18	Pigk	chr3	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class K
chr3	152469346	152472076	+	152450461	152472076	A5SS	0.33	50	50	ENSMUST00000200224.5	ENSMUSG00000039047.18	Pigk	chr3	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class K
chr3	152428213	152448126	+	152443958	152448126	5pMXE	0.25	50	50	ENSMUST00000051510.9	ENSMUSG00000039047.18	Pigk	chr3	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class K
chr3	152446530	152448126	+	152443958	152448126	A5SS	0.25	50	50	ENSMUST00000051510.9	ENSMUSG00000039047.18	Pigk	chr3	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class K
chr3	152681345	152686695	-	152552307	152686695	A3SS	0.5	50	50	ENSMUST00000044278.6	ENSMUSG00000039037.6	St6galnac5	chr3	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
chr3	152872124	152878976	-	152868504	152878976	A3SS	0.5	50	50	ENSMUST00000198047.5	ENSMUSG00000105337.5	1700094M23Rik	chr3	lncRNA	RIKEN cDNA 1700094M23 gene
chr3	152879158	152880772	-	152879158	152880838	A5SS	0.5	50	50	ENSMUST00000198047.5	ENSMUSG00000105337.5	1700094M23Rik	chr3	lncRNA	RIKEN cDNA 1700094M23 gene
chr3	153117508	153430682	-	153117508;153215134	153214940;153430682	ES	0.5	50	50	ENSMUST00000200397.5	ENSMUSG00000052544.10	St6galnac3	chr3	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
chr3	152912362	152931339	-	152912362	153117099	A5SS	0.5	50	50	ENSMUST00000200397.5	ENSMUSG00000052544.10	St6galnac3	chr3	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
chr3	153215134	153426563	-	153215134	153430682	A5SS	0.5	50	50	ENSMUST00000200397.5	ENSMUSG00000052544.10	St6galnac3	chr3	protein_coding	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
chr3	153550397	153556296	+	153550370	153556296	A5SS	0.5	50	50	ENSMUST00000044089.4	ENSMUSG00000038997.5	Asb17	chr3	protein_coding	ankyrin repeat and SOCS box-containing 17
chr3	153575401;153575822	153575724;153577903	-	153575401	153577903	cassetteExon	0.5	100	100	ENSMUST00000005630.11	ENSMUSG00000005493.16	Msh4	chr3	protein_coding	mutS homolog 4
chr3	153569150	153569239	-	153569150	153571958	A5SS	0.5	50	50	ENSMUST00000005630.11	ENSMUSG00000005493.16	Msh4	chr3	protein_coding	mutS homolog 4
chr3	153579366	153580219	-	153579366	153580294	A5SS	0.5	50	50	ENSMUST00000005630.11	ENSMUSG00000005493.16	Msh4	chr3	protein_coding	mutS homolog 4
chr3	153607225	153609815	-	153607225	153611309	A5SS	0.33	50	50	ENSMUST00000005630.11	ENSMUSG00000005493.16	Msh4	chr3	protein_coding	mutS homolog 4
chr3	153607225	153610305	-	153607225	153611309	A5SS	0.33	50	50	ENSMUST00000005630.11	ENSMUSG00000005493.16	Msh4	chr3	protein_coding	mutS homolog 4
chr3	153607225;153609966	153609815;153610305	-	153607225	153610305	cassetteExon	0.5	100	100	ENSMUST00000188338.7	ENSMUSG00000005493.16	Msh4	chr3	protein_coding	mutS homolog 4
chr3	153615235	153615898	-	153615235;153615798	153615701;153615898	ES	0.5	50	50	ENSMUST00000197438.5	ENSMUSG00000038975.15	Rabggtb	chr3	protein_coding	Rab geranylgeranyl transferase, b subunit
chr3	153614552	153614986	-	153614536	153614986	A3SS	0.5	50	50	ENSMUST00000197438.5	ENSMUSG00000038975.15	Rabggtb	chr3	protein_coding	Rab geranylgeranyl transferase, b subunit
chr3	153615940	153617562	-	153616525	153617562	A3SS	0.5	50	50	ENSMUST00000197438.5	ENSMUSG00000038975.15	Rabggtb	chr3	protein_coding	Rab geranylgeranyl transferase, b subunit
chr3	153615963	153616328	-	153616003	153616328	A3SS	0.5	50	50	ENSMUST00000167111.6	ENSMUSG00000038975.15	Rabggtb	chr3	protein_coding	Rab geranylgeranyl transferase, b subunit
chr3	153617669	153618234	-	153617669	153618571	A5SS	0.25	50	50	ENSMUST00000089950.11	ENSMUSG00000038975.15	Rabggtb	chr3	protein_coding	Rab geranylgeranyl transferase, b subunit
chr3	153617669	153618255	-	153617669	153618571	A5SS	0.25	50	50	ENSMUST00000089950.11	ENSMUSG00000038975.15	Rabggtb	chr3	protein_coding	Rab geranylgeranyl transferase, b subunit
chr3	153617669	153618551	-	153617669	153618571	A5SS	0.25	50	50	ENSMUST00000089950.11	ENSMUSG00000038975.15	Rabggtb	chr3	protein_coding	Rab geranylgeranyl transferase, b subunit
chr3	153617669	153618234	-	153617669	153618551	A5SS	0.25	50	50	ENSMUST00000198350.5	ENSMUSG00000038975.15	Rabggtb	chr3	protein_coding	Rab geranylgeranyl transferase, b subunit
chr3	153617669	153618255	-	153617669	153618551	A5SS	0.25	50	50	ENSMUST00000198350.5	ENSMUSG00000038975.15	Rabggtb	chr3	protein_coding	Rab geranylgeranyl transferase, b subunit
chr3	153617669	153618234	-	153617669	153618255	A5SS	0.25	50	50	ENSMUST00000196565.5	ENSMUSG00000038975.15	Rabggtb	chr3	protein_coding	Rab geranylgeranyl transferase, b subunit
chr3	153644804	153650033	-	153644804;153647607	153647520;153650033	ES	0.5	50	50	ENSMUST00000072697.13	ENSMUSG00000062908.13	Acadm	chr3	protein_coding	acyl-Coenzyme A dehydrogenase, medium chain
chr3	153644804	153650033	-	153644804	153647520	5pMXE	0.5	50	50	ENSMUST00000130713.2	ENSMUSG00000062908.13	Acadm	chr3	protein_coding	acyl-Coenzyme A dehydrogenase, medium chain
chr3	153644804	153650033	-	153647607	153650033	3pMXE	0.5	50	50	ENSMUST00000135724.2	ENSMUSG00000062908.13	Acadm	chr3	protein_coding	acyl-Coenzyme A dehydrogenase, medium chain
chr3	153928481	153930883	+	153928481	153939690	A3SS	0.5	50	50	ENSMUST00000089948.6	ENSMUSG00000028360.11	Slc44a5	chr3	protein_coding	solute carrier family 44, member 5
chr3	153971180	153973314	+	153971180	153975620	A3SS	0.5	50	50	ENSMUST00000089948.6	ENSMUSG00000028360.11	Slc44a5	chr3	protein_coding	solute carrier family 44, member 5
chr3	153752697	153877206	+	153679435	153877206	A5SS	0.5	50	50	ENSMUST00000089948.6	ENSMUSG00000028360.11	Slc44a5	chr3	protein_coding	solute carrier family 44, member 5
chr3	153928303	153928397	+	153910768	153928397	A5SS	0.5	50	50	ENSMUST00000089948.6	ENSMUSG00000028360.11	Slc44a5	chr3	protein_coding	solute carrier family 44, member 5
chr3	154030259	154033642	-	154030300	154033642	A3SS	0.5	50	50	ENSMUST00000177846.8	ENSMUSG00000096225.8	Lhx8	chr3	protein_coding	LIM homeobox protein 8
chr3	154012642	154017173	-	154012642	154017177	A5SS	0.5	50	50	ENSMUST00000177846.8	ENSMUSG00000096225.8	Lhx8	chr3	protein_coding	LIM homeobox protein 8
chr3	154034078	154035658	-	154034078	154035909	A5SS	0.5	50	50	ENSMUST00000177846.8	ENSMUSG00000096225.8	Lhx8	chr3	protein_coding	LIM homeobox protein 8
chr3	154285928	154296721	-	154285928;154293247	154293114;154296721	ES	0.5	50	50	ENSMUST00000052774.8	ENSMUSG00000047583.10	Tyw3	chr3	protein_coding	tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)
chr3	154293247	154299354	-	154293247;154296792	154296721;154299354	ES	0.33	50	50	ENSMUST00000052774.8	ENSMUSG00000047583.10	Tyw3	chr3	protein_coding	tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)
chr3	154285928	154299354	-	154285928;154296792	154296721;154299354	ES	0.33	50	50	ENSMUST00000170461.8	ENSMUSG00000047583.10	Tyw3	chr3	protein_coding	tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)
chr3	154285928;154293247	154293114;154299354	-	154285928;154296792	154296721;154299354	MXE	0.5	100	100	ENSMUST00000170461.8	ENSMUSG00000047583.10	Tyw3	chr3	protein_coding	tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)
chr3	154285928;154293247	154293114;154299354	-	154285928	154299354	cassetteExon	0.5	100	100	ENSMUST00000148680.3	ENSMUSG00000047583.10	Tyw3	chr3	protein_coding	tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)
chr3	154285928	154299354	-	154293247	154299354	3pMXE	0.33	50	50	ENSMUST00000122976.2	ENSMUSG00000047583.10	Tyw3	chr3	protein_coding	tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)
chr3	154324246;154324529	154324431;154327118	+	154324246	154327118	cassetteExon	0.5	100	100	ENSMUST00000192462.6	ENSMUSG00000028199.19	Cryz	chr3	protein_coding	crystallin, zeta
chr3	154303149	154310529	+	154302921	154310529	A5SS	0.2	50	50	ENSMUST00000192462.6	ENSMUSG00000028199.19	Cryz	chr3	protein_coding	crystallin, zeta
chr3	154303155	154310529	+	154302921	154310529	A5SS	0.2	50	50	ENSMUST00000192462.6	ENSMUSG00000028199.19	Cryz	chr3	protein_coding	crystallin, zeta
chr3	154303164	154310529	+	154302921	154310529	A5SS	0.2	50	50	ENSMUST00000192462.6	ENSMUSG00000028199.19	Cryz	chr3	protein_coding	crystallin, zeta
chr3	154303183	154310529	+	154302921	154310529	A5SS	0.2	50	50	ENSMUST00000192462.6	ENSMUSG00000028199.19	Cryz	chr3	protein_coding	crystallin, zeta
chr3	154310752	154312016	+	154310652	154312016	A5SS	0.5	50	50	ENSMUST00000192462.6	ENSMUSG00000028199.19	Cryz	chr3	protein_coding	crystallin, zeta
chr3	154312168	154324097	+	154312168	154317047	3pMXE	0.5	50	50	ENSMUST00000155385.8	ENSMUSG00000028199.19	Cryz	chr3	protein_coding	crystallin, zeta
chr3	154303149	154310529	+	154303164	154310529	A5SS	0.2	50	50	ENSMUST00000155385.8	ENSMUSG00000028199.19	Cryz	chr3	protein_coding	crystallin, zeta
chr3	154303155	154310529	+	154303164	154310529	A5SS	0.2	50	50	ENSMUST00000155385.8	ENSMUSG00000028199.19	Cryz	chr3	protein_coding	crystallin, zeta
chr3	154303183	154310529	+	154303164	154310529	A5SS	0.2	50	50	ENSMUST00000155385.8	ENSMUSG00000028199.19	Cryz	chr3	protein_coding	crystallin, zeta
chr3	154303149	154310529	+	154303155	154310529	A5SS	0.2	50	50	ENSMUST00000140644.8	ENSMUSG00000028199.19	Cryz	chr3	protein_coding	crystallin, zeta
chr3	154303183	154310529	+	154303155	154310529	A5SS	0.2	50	50	ENSMUST00000140644.8	ENSMUSG00000028199.19	Cryz	chr3	protein_coding	crystallin, zeta
chr3	154303183	154310529	+	154303149	154310529	A5SS	0.2	50	50	ENSMUST00000144764.8	ENSMUSG00000028199.19	Cryz	chr3	protein_coding	crystallin, zeta
chr3	154319510	154324097	+	154312168	154324097	A5SS	0.5	50	50	ENSMUST00000195103.2	ENSMUSG00000028199.19	Cryz	chr3	protein_coding	crystallin, zeta
chr3	154416967	154419511	+	154415488	154419511	A5SS	0.33	50	50	ENSMUST00000098496.9	ENSMUSG00000078161.9	Erich3	chr3	protein_coding	glutamate rich 3
chr3	154417675	154419511	+	154415488	154419511	A5SS	0.33	50	50	ENSMUST00000098496.9	ENSMUSG00000078161.9	Erich3	chr3	protein_coding	glutamate rich 3
chr3	154417675	154419511	+	154416967	154419511	A5SS	0.33	50	50	ENSMUST00000051862.8	ENSMUSG00000078161.9	Erich3	chr3	protein_coding	glutamate rich 3
chr3	154498489;154533287	154533118;154539283	-	154498489	154539283	cassetteExon	0.5	100	100	ENSMUST00000143410.7	ENSMUSG00000040086.14	Tnni3k	chr3	protein_coding	TNNI3 interacting kinase
chr3	154539342;154562267	154562158;154577730	-	154539342	154577730	cassetteExon	0.5	100	100	ENSMUST00000143410.7	ENSMUSG00000040086.14	Tnni3k	chr3	protein_coding	TNNI3 interacting kinase
chr3	154797195	154798572	-	154797195	154798936	A5SS	0.5	50	50	ENSMUST00000066568.6	ENSMUSG00000053870.8	Fpgt	chr3	protein_coding	fucose-1-phosphate guanylyltransferase
chr3	154835136	154842999	+	154835136	154869547	A3SS	0.5	50	50	ENSMUST00000029833.13	ENSMUSG00000028182.15	Lrriq3	chr3	protein_coding	leucine-rich repeats and IQ motif containing 3
chr3	154869676	154887282	+	154869676	154893301	A3SS	0.5	50	50	ENSMUST00000029833.13	ENSMUSG00000028182.15	Lrriq3	chr3	protein_coding	leucine-rich repeats and IQ motif containing 3
chr3	156256874;156257580	156257492;156267113	-	156256874	156267113	cassetteExon	0.5	100	100	ENSMUST00000149387.8	ENSMUSG00000085084.8	4930570G19Rik	chr3	lncRNA	RIKEN cDNA 4930570G19 gene
chr3	156265885	156267113	-	156256874	156267113	A3SS	0.33	50	50	ENSMUST00000149387.8	ENSMUSG00000085084.8	4930570G19Rik	chr3	lncRNA	RIKEN cDNA 4930570G19 gene
chr3	156253469	156256773	-	156253469	156256672	A5SS	0.5	50	50	ENSMUST00000149387.8	ENSMUSG00000085084.8	4930570G19Rik	chr3	lncRNA	RIKEN cDNA 4930570G19 gene
chr3	156265885	156267113	-	156257580	156267113	A3SS	0.33	50	50	ENSMUST00000139363.2	ENSMUSG00000085084.8	4930570G19Rik	chr3	lncRNA	RIKEN cDNA 4930570G19 gene
chr3	156866374	156876530	+	156866374	157018423	A3SS	0.33	50	50	ENSMUST00000074015.11	ENSMUSG00000040037.14	Negr1	chr3	protein_coding	neuronal growth regulator 1
chr3	156866374	156904061	+	156866374	157018423	A3SS	0.33	50	50	ENSMUST00000074015.11	ENSMUSG00000040037.14	Negr1	chr3	protein_coding	neuronal growth regulator 1
chr3	156866374	156904061	+	156866374	156876530	3pMXE	0.33	50	50	ENSMUST00000041425.12	ENSMUSG00000040037.14	Negr1	chr3	protein_coding	neuronal growth regulator 1
chr3	157242023	157243224	+	157242023;157242223	157242115;157243224	ES	0.33	50	50	ENSMUST00000106058.8	ENSMUSG00000028180.19	Zranb2	chr3	protein_coding	zinc finger, RAN-binding domain containing 2
chr3	157250759;157251786	157251712;157252312	+	157250759	157252312	cassetteExon	0.5	100	100	ENSMUST00000106058.8	ENSMUSG00000028180.19	Zranb2	chr3	protein_coding	zinc finger, RAN-binding domain containing 2
chr3	157242023	157242085	+	157242023	157242115	A3SS	0.25	50	50	ENSMUST00000106058.8	ENSMUSG00000028180.19	Zranb2	chr3	protein_coding	zinc finger, RAN-binding domain containing 2
chr3	157242023	157242120	+	157242023	157242115	A3SS	0.25	50	50	ENSMUST00000106058.8	ENSMUSG00000028180.19	Zranb2	chr3	protein_coding	zinc finger, RAN-binding domain containing 2
chr3	157242375	157243224	+	157242223	157243224	A5SS	0.33	50	50	ENSMUST00000106058.8	ENSMUSG00000028180.19	Zranb2	chr3	protein_coding	zinc finger, RAN-binding domain containing 2
chr3	157247458	157248795	+	157247506	157248795	A5SS	0.5	50	50	ENSMUST00000106058.8	ENSMUSG00000028180.19	Zranb2	chr3	protein_coding	zinc finger, RAN-binding domain containing 2
chr3	157242023;157242223	157242085;157243224	+	157242023	157243224	cassetteExon	0.5	100	100	ENSMUST00000184802.8	ENSMUSG00000028180.19	Zranb2	chr3	protein_coding	zinc finger, RAN-binding domain containing 2
chr3	157242023;157242375	157242085;157243224	+	157242023	157243224	cassetteExon	0.5	100	100	ENSMUST00000184802.8	ENSMUSG00000028180.19	Zranb2	chr3	protein_coding	zinc finger, RAN-binding domain containing 2
chr3	157242023;157242375	157242115;157243224	+	157242023	157243224	cassetteExon	0.5	100	100	ENSMUST00000184802.8	ENSMUSG00000028180.19	Zranb2	chr3	protein_coding	zinc finger, RAN-binding domain containing 2
chr3	157242023;157242223	157242120;157243224	+	157242023	157243224	cassetteExon	0.5	100	100	ENSMUST00000184802.8	ENSMUSG00000028180.19	Zranb2	chr3	protein_coding	zinc finger, RAN-binding domain containing 2
chr3	157242023;157242375	157242120;157243224	+	157242023	157243224	cassetteExon	0.5	100	100	ENSMUST00000184802.8	ENSMUSG00000028180.19	Zranb2	chr3	protein_coding	zinc finger, RAN-binding domain containing 2
chr3	157242023	157243224	+	157242375	157243224	A5SS&ES	0.33	50	50	ENSMUST00000029831.16	ENSMUSG00000028180.19	Zranb2	chr3	protein_coding	zinc finger, RAN-binding domain containing 2
chr3	157242023	157242085	+	157242023	157242120	A3SS	0.25	50	50	ENSMUST00000198915.5	ENSMUSG00000028180.19	Zranb2	chr3	protein_coding	zinc finger, RAN-binding domain containing 2
chr3	157310781;157347446	157347358;157349512	+	157310781	157349512	cassetteExon	0.5	100	100	ENSMUST00000041175.13	ENSMUSG00000040016.17	Ptger3	chr3	protein_coding	prostaglandin E receptor 3 (subtype EP3)
chr3	157602967	157603219	-	157602967	157610782	A5SS	0.5	50	50	ENSMUST00000118539.2	ENSMUSG00000028179.13	Cth	chr3	protein_coding	cystathionase (cystathionine gamma-lyase)
chr3	157631883;157632662	157632426;157634000	+	157631883	157634000	cassetteExon	0.5	100	100	ENSMUST00000198623.5	ENSMUSG00000028177.14	1810013D15Rik	chr3	lncRNA	RIKEN cDNA 1810013D15 gene
chr3	157631883	157634000	+	157631883	157632426	3pMXE	0.5	50	50	ENSMUST00000148898.2	ENSMUSG00000028177.14	1810013D15Rik	chr3	lncRNA	RIKEN cDNA 1810013D15 gene
chr3	157677954;157678682	157678637;157680865	+	157677954	157680865	cassetteExon	0.5	100	100	ENSMUST00000199727.5	ENSMUSG00000039988.15	Ankrd13c	chr3	protein_coding	ankyrin repeat domain 13c
chr3	157699422	157700234	+	157697449	157700234	A5SS	0.5	50	50	ENSMUST00000199727.5	ENSMUSG00000039988.15	Ankrd13c	chr3	protein_coding	ankyrin repeat domain 13c
chr3	157677954	157680865	+	157677954	157678637	A3SS	0.5	50	50	ENSMUST00000197872.5	ENSMUSG00000039988.15	Ankrd13c	chr3	protein_coding	ankyrin repeat domain 13c
chr3	157728587;157728996	157728880;157732362	-	157728587	157732362	cassetteExon	0.5	100	100	ENSMUST00000121326.8	ENSMUSG00000055436.19	Srsf11	chr3	protein_coding	serine and arginine-rich splicing factor 11
chr3	157728587;157729868	157729760;157732362	-	157728587	157732362	cassetteExon	0.5	100	100	ENSMUST00000121326.8	ENSMUSG00000055436.19	Srsf11	chr3	protein_coding	serine and arginine-rich splicing factor 11
chr3	157737285;157737703	157737628;157742153	-	157737285	157742153	cassetteExon	0.5	100	100	ENSMUST00000121326.8	ENSMUSG00000055436.19	Srsf11	chr3	protein_coding	serine and arginine-rich splicing factor 11
chr3	157718040	157719589	-	157718512	157719589	A3SS&ES	0.33	50	50	ENSMUST00000121326.8	ENSMUSG00000055436.19	Srsf11	chr3	protein_coding	serine and arginine-rich splicing factor 11
chr3	157718533	157719589	-	157718512	157719589	A3SS	0.33	50	50	ENSMUST00000121326.8	ENSMUSG00000055436.19	Srsf11	chr3	protein_coding	serine and arginine-rich splicing factor 11
chr3	157730398	157732362	-	157728587	157732362	A3SS	0.25	50	50	ENSMUST00000121326.8	ENSMUSG00000055436.19	Srsf11	chr3	protein_coding	serine and arginine-rich splicing factor 11
chr3	157718533	157719589	-	157718040	157719589	A3SS	0.33	50	50	ENSMUST00000127778.6	ENSMUSG00000055436.19	Srsf11	chr3	protein_coding	serine and arginine-rich splicing factor 11
chr3	157728587	157729760	-	157728587	157728880	5pMXE	0.33	50	50	ENSMUST00000199520.5	ENSMUSG00000055436.19	Srsf11	chr3	protein_coding	serine and arginine-rich splicing factor 11
chr3	157728587	157732362	-	157728587	157728880	5pMXE	0.33	50	50	ENSMUST00000199520.5	ENSMUSG00000055436.19	Srsf11	chr3	protein_coding	serine and arginine-rich splicing factor 11
chr3	157728587	157729760	-	157728587;157728996	157728880;157729760	ES	0.5	50	50	ENSMUST00000126716.9	ENSMUSG00000055436.19	Srsf11	chr3	protein_coding	serine and arginine-rich splicing factor 11
chr3	157728996	157732362	-	157728996;157729868	157729760;157732362	ES	0.25	50	50	ENSMUST00000126716.9	ENSMUSG00000055436.19	Srsf11	chr3	protein_coding	serine and arginine-rich splicing factor 11
chr3	157729868;157730398	157730335;157732362	-	157729868	157732362	cassetteExon	0.5	100	100	ENSMUST00000126716.9	ENSMUSG00000055436.19	Srsf11	chr3	protein_coding	serine and arginine-rich splicing factor 11
chr3	157728587;157728996	157728880;157732362	-	157728587;157729868	157729760;157732362	MXE	0.5	100	100	ENSMUST00000140491.8	ENSMUSG00000055436.19	Srsf11	chr3	protein_coding	serine and arginine-rich splicing factor 11
chr3	157730398	157732362	-	157728996	157732362	A3SS	0.25	50	50	ENSMUST00000147304.3	ENSMUSG00000055436.19	Srsf11	chr3	protein_coding	serine and arginine-rich splicing factor 11
chr3	157746259	157749198	+	157746259;157747296	157747223;157749198	ES	0.25	50	50	ENSMUST00000072080.10	ENSMUSG00000063052.10	Lrrc40	chr3	protein_coding	leucine rich repeat containing 40
chr3	157746259;157747570	157747500;157749198	+	157746259;157747296	157747223;157749198	MXE	0.5	100	100	ENSMUST00000072080.10	ENSMUSG00000063052.10	Lrrc40	chr3	protein_coding	leucine rich repeat containing 40
chr3	157746259	157747257	+	157746259	157747223	A3SS	0.25	50	50	ENSMUST00000072080.10	ENSMUSG00000063052.10	Lrrc40	chr3	protein_coding	leucine rich repeat containing 40
chr3	157742513	157754038	+	157742513;157749327	157749198;157754038	ES	0.5	50	50	ENSMUST00000156597.8	ENSMUSG00000063052.10	Lrrc40	chr3	protein_coding	leucine rich repeat containing 40
chr3	157742513;157746259	157746078;157749198	+	157742513	157749198	cassetteExon	0.5	100	100	ENSMUST00000156597.8	ENSMUSG00000063052.10	Lrrc40	chr3	protein_coding	leucine rich repeat containing 40
chr3	157747296	157749198	+	157742513	157749198	A5SS	0.25	50	50	ENSMUST00000156597.8	ENSMUSG00000063052.10	Lrrc40	chr3	protein_coding	leucine rich repeat containing 40
chr3	157747570	157749198	+	157742513	157749198	A5SS	0.25	50	50	ENSMUST00000156597.8	ENSMUSG00000063052.10	Lrrc40	chr3	protein_coding	leucine rich repeat containing 40
chr3	157746259	157749198	+	157746259;157747570	157747500;157749198	ES	0.25	50	50	ENSMUST00000150525.8	ENSMUSG00000063052.10	Lrrc40	chr3	protein_coding	leucine rich repeat containing 40
chr3	157746259;157747296	157747257;157749198	+	157746259;157747570	157747500;157749198	MXE	0.5	100	100	ENSMUST00000150525.8	ENSMUSG00000063052.10	Lrrc40	chr3	protein_coding	leucine rich repeat containing 40
chr3	157746259;157747570	157747223;157749198	+	157746259	157749198	cassetteExon	0.5	100	100	ENSMUST00000131518.8	ENSMUSG00000063052.10	Lrrc40	chr3	protein_coding	leucine rich repeat containing 40
chr3	157746259;157747296	157747257;157749198	+	157746259	157749198	cassetteExon	0.5	100	100	ENSMUST00000131518.8	ENSMUSG00000063052.10	Lrrc40	chr3	protein_coding	leucine rich repeat containing 40
chr3	157746259;157747570	157747257;157749198	+	157746259	157749198	cassetteExon	0.5	100	100	ENSMUST00000131518.8	ENSMUSG00000063052.10	Lrrc40	chr3	protein_coding	leucine rich repeat containing 40
chr3	157742513	157746078	+	157742513	157754038	A3SS	0.33	50	50	ENSMUST00000200540.2	ENSMUSG00000063052.10	Lrrc40	chr3	protein_coding	leucine rich repeat containing 40
chr3	157854336	157865870	-	157854336;157862565	157862425;157865870	ES	0.33	50	50	ENSMUST00000200196.5	ENSMUSG00000028176.14	Lrrc7	chr3	protein_coding	leucine rich repeat containing 7
chr3	157810122	157832852	-	157810139	157832852	A3SS	0.5	50	50	ENSMUST00000200196.5	ENSMUSG00000028176.14	Lrrc7	chr3	protein_coding	leucine rich repeat containing 7
chr3	157841046	157865870	-	157841046;157854336	157854217;157865870	ES	0.33	50	50	ENSMUST00000200137.5	ENSMUSG00000028176.14	Lrrc7	chr3	protein_coding	leucine rich repeat containing 7
chr3	158059104	158158329	-	158059104;158118842	158118767;158158329	ES	0.5	50	50	ENSMUST00000200137.5	ENSMUSG00000028176.14	Lrrc7	chr3	protein_coding	leucine rich repeat containing 7
chr3	157862565	157865870	-	157841046	157865870	A3SS	0.33	50	50	ENSMUST00000199890.5	ENSMUSG00000028176.14	Lrrc7	chr3	protein_coding	leucine rich repeat containing 7
chr3	158059104	158158329	-	158118842	158158329	3pMXE	0.5	50	50	ENSMUST00000197866.2	ENSMUSG00000028176.14	Lrrc7	chr3	protein_coding	leucine rich repeat containing 7
chr3	159226607	159229414	+	159226607;159228993	159228163;159229414	ES	0.5	50	50	ENSMUST00000120272.8	ENSMUSG00000028175.16	Depdc1a	chr3	protein_coding	DEP domain containing 1a
chr3	159233766	159234642	+	159233766	159234636	A3SS	0.5	50	50	ENSMUST00000120272.8	ENSMUSG00000028175.16	Depdc1a	chr3	protein_coding	DEP domain containing 1a
chr3	159226607	159228163	+	159226607	159229414	A3SS	0.5	50	50	ENSMUST00000106041.3	ENSMUSG00000028175.16	Depdc1a	chr3	protein_coding	DEP domain containing 1a
chr3	159228993	159229414	+	159226607	159229414	A5SS	0.5	50	50	ENSMUST00000106041.3	ENSMUSG00000028175.16	Depdc1a	chr3	protein_coding	DEP domain containing 1a
chr3	159307305;159309034	159308964;159309974	+	159307305	159309974	cassetteExon	0.5	100	100	ENSMUST00000196999.5	ENSMUSG00000028174.13	Rpe65	chr3	protein_coding	retinal pigment epithelium 65
chr3	159545684;159554282	159554202;159578546	+	159545684	159578546	cassetteExon	0.5	100	100	ENSMUST00000068952.10	ENSMUSG00000028173.11	Wls	chr3	protein_coding	wntless WNT ligand secretion mediator
chr4	3242833	3247359	+	3242190	3247359	A5SS	0.5	50	50	ENSMUST00000141405.2	ENSMUSG00000085180.2	AI838599	chr4	lncRNA	expressed sequence AI838599
chr4	3247581	3248035	+	3247581	3256717	A3SS	0.5	50	50	ENSMUST00000133960.2	ENSMUSG00000085180.2	AI838599	chr4	lncRNA	expressed sequence AI838599
chr4	3560692	3564093	-	3560692;3562146	3562020;3564093	ES	0.5	50	50	ENSMUST00000154922.8	ENSMUSG00000028232.14	Tmem68	chr4	protein_coding	transmembrane protein 68
chr4	3569752;3569939	3569870;3570321	-	3569752	3570321	cassetteExon	0.5	100	100	ENSMUST00000154922.8	ENSMUSG00000028232.14	Tmem68	chr4	protein_coding	transmembrane protein 68
chr4	3570372	3574240	-	3570372	3574704	A5SS	0.5	50	50	ENSMUST00000154922.8	ENSMUSG00000028232.14	Tmem68	chr4	protein_coding	transmembrane protein 68
chr4	3593637;3595032	3594935;3595357	+	3593637	3595357	cassetteExon	0.5	100	100	ENSMUST00000052712.6	ENSMUSG00000028233.7	Tgs1	chr4	protein_coding	trimethylguanosine synthase 1
chr4	3783104	3812828	+	3783104	3789742	3pMXE	0.5	50	50	ENSMUST00000041377.13	ENSMUSG00000042228.15	Lyn	chr4	protein_coding	LYN proto-oncogene, Src family tyrosine kinase
chr4	3738798	3742442	+	3738861	3742442	A5SS	0.5	50	50	ENSMUST00000041377.13	ENSMUSG00000042228.15	Lyn	chr4	protein_coding	LYN proto-oncogene, Src family tyrosine kinase
chr4	3904947	3908906	-	3904947;3905805	3905447;3908906	ES	0.5	50	50	ENSMUST00000003369.10	ENSMUSG00000003282.10	Plag1	chr4	protein_coding	pleiomorphic adenoma gene 1
chr4	3909002	3915621	-	3909002;3912511	3912420;3915621	ES	0.5	50	50	ENSMUST00000003369.10	ENSMUSG00000003282.10	Plag1	chr4	protein_coding	pleiomorphic adenoma gene 1
chr4	3904947	3908906	-	3905805	3908906	3pMXE	0.5	50	50	ENSMUST00000151543.2	ENSMUSG00000003282.10	Plag1	chr4	protein_coding	pleiomorphic adenoma gene 1
chr4	3938962	3941246	+	3938962;3939526	3939379;3941246	ES	0.33	50	50	ENSMUST00000108386.8	ENSMUSG00000042198.13	Chchd7	chr4	protein_coding	coiled-coil-helix-coiled-coil-helix domain containing 7
chr4	3939526;3940883	3940779;3941246	+	3939526	3941246	cassetteExon	0.5	100	100	ENSMUST00000108386.8	ENSMUSG00000042198.13	Chchd7	chr4	protein_coding	coiled-coil-helix-coiled-coil-helix domain containing 7
chr4	3942819;3943026	3942988;3943388	+	3942819	3943388	cassetteExon	0.5	100	100	ENSMUST00000108386.8	ENSMUSG00000042198.13	Chchd7	chr4	protein_coding	coiled-coil-helix-coiled-coil-helix domain containing 7
chr4	3938962	3939424	+	3938962	3939379	A3SS	0.33	50	50	ENSMUST00000108386.8	ENSMUSG00000042198.13	Chchd7	chr4	protein_coding	coiled-coil-helix-coiled-coil-helix domain containing 7
chr4	3941311	3942635	+	3941311	3942721	A3SS	0.5	50	50	ENSMUST00000108386.8	ENSMUSG00000042198.13	Chchd7	chr4	protein_coding	coiled-coil-helix-coiled-coil-helix domain containing 7
chr4	3939131	3939379	+	3938962	3939379	A5SS	0.5	50	50	ENSMUST00000108386.8	ENSMUSG00000042198.13	Chchd7	chr4	protein_coding	coiled-coil-helix-coiled-coil-helix domain containing 7
chr4	3938962;3939526	3939424;3941246	+	3938962	3941246	cassetteExon	0.5	100	100	ENSMUST00000121110.8	ENSMUSG00000042198.13	Chchd7	chr4	protein_coding	coiled-coil-helix-coiled-coil-helix domain containing 7
chr4	3940883	3941246	+	3938962	3941246	A5SS	0.33	50	50	ENSMUST00000121110.8	ENSMUSG00000042198.13	Chchd7	chr4	protein_coding	coiled-coil-helix-coiled-coil-helix domain containing 7
chr4	3939131	3939424	+	3938962	3939424	A5SS	0.5	50	50	ENSMUST00000149544.8	ENSMUSG00000042198.13	Chchd7	chr4	protein_coding	coiled-coil-helix-coiled-coil-helix domain containing 7
chr4	3939131	3939379	+	3939131	3939424	A3SS	0.5	50	50	ENSMUST00000121651.8	ENSMUSG00000042198.13	Chchd7	chr4	protein_coding	coiled-coil-helix-coiled-coil-helix domain containing 7
chr4	3938962	3941246	+	3939526	3941246	A5SS&ES	0.33	50	50	ENSMUST00000121651.8	ENSMUSG00000042198.13	Chchd7	chr4	protein_coding	coiled-coil-helix-coiled-coil-helix domain containing 7
chr4	3943492	3947121	+	3943492;3945972	3945638;3947121	ES	0.5	50	50	ENSMUST00000150618.8	ENSMUSG00000042198.13	Chchd7	chr4	protein_coding	coiled-coil-helix-coiled-coil-helix domain containing 7
chr4	3947188	3949612	+	3947188;3949127	3949056;3949612	ES	0.5	50	50	ENSMUST00000150618.8	ENSMUSG00000042198.13	Chchd7	chr4	protein_coding	coiled-coil-helix-coiled-coil-helix domain containing 7
chr4	5633205	5638670	+	5633205	5638638	A3SS	0.5	50	50	ENSMUST00000156903.8	ENSMUSG00000086066.8	4930423M02Rik	chr4	lncRNA	RIKEN cDNA 4930423M02 gene
chr4	5644410	5729571	+	5644410;5678998	5678903;5729571	ES	0.33	50	50	ENSMUST00000124256.8	ENSMUSG00000049119.15	Fam110b	chr4	protein_coding	family with sequence similarity 110, member B
chr4	5729657	5806225	+	5729657	5798269	3pMXE	0.5	50	50	ENSMUST00000124256.8	ENSMUSG00000049119.15	Fam110b	chr4	protein_coding	family with sequence similarity 110, member B
chr4	5644353	5678903	+	5644410	5678903	A5SS	0.5	50	50	ENSMUST00000124256.8	ENSMUSG00000049119.15	Fam110b	chr4	protein_coding	family with sequence similarity 110, member B
chr4	5724510	5729571	+	5678998	5729571	A5SS	0.33	50	50	ENSMUST00000124256.8	ENSMUSG00000049119.15	Fam110b	chr4	protein_coding	family with sequence similarity 110, member B
chr4	5772954	5798269	+	5729657	5798269	A5SS	0.33	50	50	ENSMUST00000124256.8	ENSMUSG00000049119.15	Fam110b	chr4	protein_coding	family with sequence similarity 110, member B
chr4	5798182	5798269	+	5729657	5798269	A5SS	0.33	50	50	ENSMUST00000124256.8	ENSMUSG00000049119.15	Fam110b	chr4	protein_coding	family with sequence similarity 110, member B
chr4	5724510	5729571	+	5644410	5729571	A5SS	0.33	50	50	ENSMUST00000054857.13	ENSMUSG00000049119.15	Fam110b	chr4	protein_coding	family with sequence similarity 110, member B
chr4	5644410	5729571	+	5678998	5729571	A5SS&ES	0.33	50	50	ENSMUST00000141479.8	ENSMUSG00000049119.15	Fam110b	chr4	protein_coding	family with sequence similarity 110, member B
chr4	5798182	5798269	+	5772954	5798269	A5SS	0.33	50	50	ENSMUST00000156582.8	ENSMUSG00000049119.15	Fam110b	chr4	protein_coding	family with sequence similarity 110, member B
chr4	6272890	6275492	-	6272890;6273824	6273584;6275492	ES	0.5	50	50	ENSMUST00000029905.2	ENSMUSG00000028240.3	Cyp7a1	chr4	protein_coding	cytochrome P450, family 7, subfamily a, polypeptide 1
chr4	6365759;6367808	6367640;6377077	+	6365759	6377077	cassetteExon	0.5	100	100	ENSMUST00000029912.11	ENSMUSG00000028249.16	Sdcbp	chr4	protein_coding	syndecan binding protein
chr4	6365759	6371578	+	6365759	6377077	A3SS	0.33	50	50	ENSMUST00000029912.11	ENSMUSG00000028249.16	Sdcbp	chr4	protein_coding	syndecan binding protein
chr4	6381099	6384160	+	6381099	6385026	A3SS	0.33	50	50	ENSMUST00000029912.11	ENSMUSG00000028249.16	Sdcbp	chr4	protein_coding	syndecan binding protein
chr4	6381099	6385029	+	6381099	6385026	A3SS	0.33	50	50	ENSMUST00000029912.11	ENSMUSG00000028249.16	Sdcbp	chr4	protein_coding	syndecan binding protein
chr4	6365921	6377077	+	6365759	6377077	A5SS	0.25	50	50	ENSMUST00000029912.11	ENSMUSG00000028249.16	Sdcbp	chr4	protein_coding	syndecan binding protein
chr4	6376894	6377077	+	6365759	6377077	A5SS	0.25	50	50	ENSMUST00000029912.11	ENSMUSG00000028249.16	Sdcbp	chr4	protein_coding	syndecan binding protein
chr4	6381099	6384160	+	6381099	6385029	A3SS	0.33	50	50	ENSMUST00000103008.12	ENSMUSG00000028249.16	Sdcbp	chr4	protein_coding	syndecan binding protein
chr4	6365759	6367640	+	6365759	6371578	A3SS	0.33	50	50	ENSMUST00000155247.2	ENSMUSG00000028249.16	Sdcbp	chr4	protein_coding	syndecan binding protein
chr4	6386708	6407264	+	6386708	6392946	3pMXE	0.5	50	50	ENSMUST00000175769.8	ENSMUSG00000028249.16	Sdcbp	chr4	protein_coding	syndecan binding protein
chr4	6367808	6377077	+	6365921	6377077	A5SS	0.25	50	50	ENSMUST00000175769.8	ENSMUSG00000028249.16	Sdcbp	chr4	protein_coding	syndecan binding protein
chr4	6376894	6377077	+	6365921	6377077	A5SS	0.25	50	50	ENSMUST00000175769.8	ENSMUSG00000028249.16	Sdcbp	chr4	protein_coding	syndecan binding protein
chr4	6376894	6377077	+	6367808	6377077	A5SS	0.25	50	50	ENSMUST00000140830.8	ENSMUSG00000028249.16	Sdcbp	chr4	protein_coding	syndecan binding protein
chr4	6433334	6437742	-	6433334;6435107	6435057;6437742	ES	0.5	50	50	ENSMUST00000029910.12	ENSMUSG00000028245.16	Nsmaf	chr4	protein_coding	neutral sphingomyelinase (N-SMase) activation associated factor
chr4	6430023	6432680	-	6428521	6432680	A3SS	0.5	50	50	ENSMUST00000029910.12	ENSMUSG00000028245.16	Nsmaf	chr4	protein_coding	neutral sphingomyelinase (N-SMase) activation associated factor
chr4	6437745	6437854	-	6437778	6437854	A3SS	0.5	50	50	ENSMUST00000029910.12	ENSMUSG00000028245.16	Nsmaf	chr4	protein_coding	neutral sphingomyelinase (N-SMase) activation associated factor
chr4	6440989	6444278	-	6440989	6453985	A5SS	0.25	50	50	ENSMUST00000029910.12	ENSMUSG00000028245.16	Nsmaf	chr4	protein_coding	neutral sphingomyelinase (N-SMase) activation associated factor
chr4	6440989	6446191	-	6440989	6453985	A5SS	0.25	50	50	ENSMUST00000029910.12	ENSMUSG00000028245.16	Nsmaf	chr4	protein_coding	neutral sphingomyelinase (N-SMase) activation associated factor
chr4	6440989	6453487	-	6440989	6453985	A5SS	0.25	50	50	ENSMUST00000029910.12	ENSMUSG00000028245.16	Nsmaf	chr4	protein_coding	neutral sphingomyelinase (N-SMase) activation associated factor
chr4	6440989	6453985	-	6398959	6453985	A3SS	0.5	50	50	ENSMUST00000156715.2	ENSMUSG00000028245.16	Nsmaf	chr4	protein_coding	neutral sphingomyelinase (N-SMase) activation associated factor
chr4	6398959	6406787	-	6398959	6453985	A5SS	0.5	50	50	ENSMUST00000156715.2	ENSMUSG00000028245.16	Nsmaf	chr4	protein_coding	neutral sphingomyelinase (N-SMase) activation associated factor
chr4	6440989	6444278	-	6440989	6453487	A5SS	0.25	50	50	ENSMUST00000156283.8	ENSMUSG00000028245.16	Nsmaf	chr4	protein_coding	neutral sphingomyelinase (N-SMase) activation associated factor
chr4	6440989	6446191	-	6440989	6453487	A5SS	0.25	50	50	ENSMUST00000156283.8	ENSMUSG00000028245.16	Nsmaf	chr4	protein_coding	neutral sphingomyelinase (N-SMase) activation associated factor
chr4	6440989	6444278	-	6440989	6446191	A5SS	0.25	50	50	ENSMUST00000145399.8	ENSMUSG00000028245.16	Nsmaf	chr4	protein_coding	neutral sphingomyelinase (N-SMase) activation associated factor
chr4	6688970	6689147	-	6688970	6697410	A5SS	0.5	50	50	ENSMUST00000039987.4	ENSMUSG00000041272.12	Tox	chr4	protein_coding	thymocyte selection-associated high mobility group box
chr4	8691067	8751324	+	8690775	8751324	A5SS	0.25	50	50	ENSMUST00000170457.2	ENSMUSG00000041235.13	Chd7	chr4	protein_coding	chromodomain helicase DNA binding protein 7
chr4	8691434	8751324	+	8690775	8751324	A5SS	0.25	50	50	ENSMUST00000170457.2	ENSMUSG00000041235.13	Chd7	chr4	protein_coding	chromodomain helicase DNA binding protein 7
chr4	8710558	8751324	+	8690775	8751324	A5SS	0.25	50	50	ENSMUST00000170457.2	ENSMUSG00000041235.13	Chd7	chr4	protein_coding	chromodomain helicase DNA binding protein 7
chr4	8855514	8856674	+	8855514	8856671	A3SS	0.5	50	50	ENSMUST00000039267.10	ENSMUSG00000041235.13	Chd7	chr4	protein_coding	chromodomain helicase DNA binding protein 7
chr4	8691434	8751324	+	8691067	8751324	A5SS	0.25	50	50	ENSMUST00000039267.10	ENSMUSG00000041235.13	Chd7	chr4	protein_coding	chromodomain helicase DNA binding protein 7
chr4	8710558	8751324	+	8691067	8751324	A5SS	0.25	50	50	ENSMUST00000039267.10	ENSMUSG00000041235.13	Chd7	chr4	protein_coding	chromodomain helicase DNA binding protein 7
chr4	8710558	8751324	+	8691434	8751324	A5SS	0.25	50	50	ENSMUST00000051558.10	ENSMUSG00000041235.13	Chd7	chr4	protein_coding	chromodomain helicase DNA binding protein 7
chr4	9269471	9281388	+	9269734	9281388	A5SS	0.25	50	50	ENSMUST00000147285.2	ENSMUSG00000041216.16	Clvs1	chr4	protein_coding	clavesin 1
chr4	9271531	9281388	+	9269734	9281388	A5SS	0.25	50	50	ENSMUST00000147285.2	ENSMUSG00000041216.16	Clvs1	chr4	protein_coding	clavesin 1
chr4	9280538	9281388	+	9269734	9281388	A5SS	0.25	50	50	ENSMUST00000147285.2	ENSMUSG00000041216.16	Clvs1	chr4	protein_coding	clavesin 1
chr4	9269471;9280538	9280381;9281388	+	9269471	9281388	cassetteExon	0.5	100	100	ENSMUST00000128117.8	ENSMUSG00000041216.16	Clvs1	chr4	protein_coding	clavesin 1
chr4	9271531	9281388	+	9269471	9281388	A5SS	0.25	50	50	ENSMUST00000128117.8	ENSMUSG00000041216.16	Clvs1	chr4	protein_coding	clavesin 1
chr4	9282012	9350647	+	9282008	9350647	A5SS	0.25	50	50	ENSMUST00000128117.8	ENSMUSG00000041216.16	Clvs1	chr4	protein_coding	clavesin 1
chr4	9312068	9350647	+	9282008	9350647	A5SS	0.25	50	50	ENSMUST00000128117.8	ENSMUSG00000041216.16	Clvs1	chr4	protein_coding	clavesin 1
chr4	9335713	9350647	+	9282008	9350647	A5SS	0.25	50	50	ENSMUST00000128117.8	ENSMUSG00000041216.16	Clvs1	chr4	protein_coding	clavesin 1
chr4	9312068	9350647	+	9282012	9350647	A5SS	0.25	50	50	ENSMUST00000038841.14	ENSMUSG00000041216.16	Clvs1	chr4	protein_coding	clavesin 1
chr4	9335713	9350647	+	9282012	9350647	A5SS	0.25	50	50	ENSMUST00000038841.14	ENSMUSG00000041216.16	Clvs1	chr4	protein_coding	clavesin 1
chr4	9271531	9281388	+	9280538	9281388	A5SS&ES	0.25	50	50	ENSMUST00000141734.2	ENSMUSG00000041216.16	Clvs1	chr4	protein_coding	clavesin 1
chr4	9335713	9350647	+	9312068	9350647	A5SS	0.25	50	50	ENSMUST00000141085.8	ENSMUSG00000041216.16	Clvs1	chr4	protein_coding	clavesin 1
chr4	9286096	9287251	-	9285502	9287251	A3SS	0.5	50	50	ENSMUST00000149848.2	ENSMUSG00000086233.2	Gm11816	chr4	lncRNA	predicted gene 11816
chr4	9453445	9474898	-	9448275	9474898	A3SS	0.5	50	50	ENSMUST00000151232.2	ENSMUSG00000028207.19	Asph	chr4	protein_coding	aspartate-beta-hydroxylase
chr4	9598301	9601307	-	9598301;9598780	9598733;9601307	ES	0.5	50	50	ENSMUST00000078139.13	ENSMUSG00000028207.19	Asph	chr4	protein_coding	aspartate-beta-hydroxylase
chr4	9604629	9610843	-	9604629;9607871	9607797;9610843	ES	0.33	50	50	ENSMUST00000078139.13	ENSMUSG00000028207.19	Asph	chr4	protein_coding	aspartate-beta-hydroxylase
chr4	9607871;9610552	9610413;9610843	-	9607871	9610843	cassetteExon	0.5	100	100	ENSMUST00000078139.13	ENSMUSG00000028207.19	Asph	chr4	protein_coding	aspartate-beta-hydroxylase
chr4	9610938;9624401	9624360;9635901	-	9610938	9635901	cassetteExon	0.5	100	100	ENSMUST00000078139.13	ENSMUSG00000028207.19	Asph	chr4	protein_coding	aspartate-beta-hydroxylase
chr4	9635969;9637703	9637659;9639198	-	9635969	9639198	cassetteExon	0.5	100	100	ENSMUST00000078139.13	ENSMUSG00000028207.19	Asph	chr4	protein_coding	aspartate-beta-hydroxylase
chr4	9576973	9583812	-	9542310	9583812	A3SS	0.5	50	50	ENSMUST00000078139.13	ENSMUSG00000028207.19	Asph	chr4	protein_coding	aspartate-beta-hydroxylase
chr4	9630952	9635901	-	9610938	9635901	A3SS	0.25	50	50	ENSMUST00000078139.13	ENSMUSG00000028207.19	Asph	chr4	protein_coding	aspartate-beta-hydroxylase
chr4	9668512	9668781	-	9639347	9668781	A3SS	0.5	50	50	ENSMUST00000078139.13	ENSMUSG00000028207.19	Asph	chr4	protein_coding	aspartate-beta-hydroxylase
chr4	9639347	9643535	-	9639347	9668781	A5SS	0.33	50	50	ENSMUST00000078139.13	ENSMUSG00000028207.19	Asph	chr4	protein_coding	aspartate-beta-hydroxylase
chr4	9639347	9669156	-	9639347	9668781	A5SS	0.33	50	50	ENSMUST00000078139.13	ENSMUSG00000028207.19	Asph	chr4	protein_coding	aspartate-beta-hydroxylase
chr4	9639347	9643535	-	9639347	9669156	A5SS	0.33	50	50	ENSMUST00000108339.8	ENSMUSG00000028207.19	Asph	chr4	protein_coding	aspartate-beta-hydroxylase
chr4	9610552	9610843	-	9604629	9610843	A3SS	0.33	50	50	ENSMUST00000108333.8	ENSMUSG00000028207.19	Asph	chr4	protein_coding	aspartate-beta-hydroxylase
chr4	9622226	9624360	-	9610938	9624360	A3SS	0.5	50	50	ENSMUST00000108333.8	ENSMUSG00000028207.19	Asph	chr4	protein_coding	aspartate-beta-hydroxylase
chr4	9630952	9635901	-	9624401	9635901	A3SS	0.25	50	50	ENSMUST00000108333.8	ENSMUSG00000028207.19	Asph	chr4	protein_coding	aspartate-beta-hydroxylase
chr4	9604629;9610938	9610843;9635901	-	9604629	9635901	cassetteExon	0.5	100	100	ENSMUST00000108335.8	ENSMUSG00000028207.19	Asph	chr4	protein_coding	aspartate-beta-hydroxylase
chr4	9624401	9635901	-	9604629	9635901	A3SS	0.25	50	50	ENSMUST00000108335.8	ENSMUSG00000028207.19	Asph	chr4	protein_coding	aspartate-beta-hydroxylase
chr4	9630952	9635901	-	9604629	9635901	A3SS	0.25	50	50	ENSMUST00000108335.8	ENSMUSG00000028207.19	Asph	chr4	protein_coding	aspartate-beta-hydroxylase
chr4	9604629	9607797	-	9604629	9635901	A5SS	0.33	50	50	ENSMUST00000108335.8	ENSMUSG00000028207.19	Asph	chr4	protein_coding	aspartate-beta-hydroxylase
chr4	9604629	9610843	-	9607871	9610843	3pMXE	0.33	50	50	ENSMUST00000152526.8	ENSMUSG00000028207.19	Asph	chr4	protein_coding	aspartate-beta-hydroxylase
chr4	9604629	9635901	-	9610938	9635901	3pMXE	0.25	50	50	ENSMUST00000084912.12	ENSMUSG00000028207.19	Asph	chr4	protein_coding	aspartate-beta-hydroxylase
chr4	9782739	9819924	+	9782739;9785161	9784905;9819924	ES	0.5	50	50	ENSMUST00000124122.8	ENSMUSG00000085558.8	4930412C18Rik	chr4	lncRNA	RIKEN cDNA 4930412C18 gene
chr4	9770821	9782626	+	9770694	9782626	A5SS	0.33	50	50	ENSMUST00000124122.8	ENSMUSG00000085558.8	4930412C18Rik	chr4	lncRNA	RIKEN cDNA 4930412C18 gene
chr4	9770948	9782626	+	9770694	9782626	A5SS	0.33	50	50	ENSMUST00000124122.8	ENSMUSG00000085558.8	4930412C18Rik	chr4	lncRNA	RIKEN cDNA 4930412C18 gene
chr4	9770821	9776037	+	9770821	9782626	A3SS	0.5	50	50	ENSMUST00000138390.8	ENSMUSG00000085558.8	4930412C18Rik	chr4	lncRNA	RIKEN cDNA 4930412C18 gene
chr4	9770948	9782626	+	9770821	9782626	A5SS	0.33	50	50	ENSMUST00000138390.8	ENSMUSG00000085558.8	4930412C18Rik	chr4	lncRNA	RIKEN cDNA 4930412C18 gene
chr4	9776197	9779275	+	9776197	9776768	3pMXE	0.5	50	50	ENSMUST00000146481.8	ENSMUSG00000085558.8	4930412C18Rik	chr4	lncRNA	RIKEN cDNA 4930412C18 gene
chr4	9771102	9776037	+	9770821	9776037	A5SS	0.5	50	50	ENSMUST00000146481.8	ENSMUSG00000085558.8	4930412C18Rik	chr4	lncRNA	RIKEN cDNA 4930412C18 gene
chr4	10508098	10742888	-	10508098;10509818	10509660;10742888	ES	0.5	50	50	ENSMUST00000145856.2	ENSMUSG00000086080.8	1700123O12Rik	chr4	lncRNA	RIKEN cDNA 1700123O12 gene
chr4	10746087;10746920	10746578;10776504	-	10746087	10776504	cassetteExon	0.5	100	100	ENSMUST00000146783.8	ENSMUSG00000086080.8	1700123O12Rik	chr4	lncRNA	RIKEN cDNA 1700123O12 gene
chr4	10776563;10788612	10788485;10797642	-	10776563	10797642	cassetteExon	0.5	100	100	ENSMUST00000146783.8	ENSMUSG00000086080.8	1700123O12Rik	chr4	lncRNA	RIKEN cDNA 1700123O12 gene
chr4	10882472	10891622	+	10882472	10893263	A3SS	0.5	50	50	ENSMUST00000080517.14	ENSMUSG00000059482.16	2610301B20Rik	chr4	protein_coding	RIKEN cDNA 2610301B20 gene
chr4	10893358	10897896	+	10893358	10897899	A3SS	0.5	50	50	ENSMUST00000080517.14	ENSMUSG00000059482.16	2610301B20Rik	chr4	protein_coding	RIKEN cDNA 2610301B20 gene
chr4	10874693	10879523	+	10874772	10879523	A5SS	0.5	50	50	ENSMUST00000080517.14	ENSMUSG00000059482.16	2610301B20Rik	chr4	protein_coding	RIKEN cDNA 2610301B20 gene
chr4	10991354	11007866	-	10991354	11007393	5pMXE	0.5	50	50	ENSMUST00000054776.4	ENSMUSG00000049969.4	Plekhf2	chr4	protein_coding	pleckstrin homology domain containing, family F (with FYVE domain) member 2
chr4	11051225	11059012	-	11051225;11053488	11053432;11059012	ES	0.5	50	50	ENSMUST00000058183.9	ENSMUSG00000050323.15	Ndufaf6	chr4	protein_coding	NADH:ubiquinone oxidoreductase complex assembly factor 6
chr4	11062152	11070200	-	11062152;11066707	11066651;11070200	ES	0.5	50	50	ENSMUST00000058183.9	ENSMUSG00000050323.15	Ndufaf6	chr4	protein_coding	NADH:ubiquinone oxidoreductase complex assembly factor 6
chr4	11070322	11073140	-	11070322	11073144	A5SS	0.33	50	50	ENSMUST00000058183.9	ENSMUSG00000050323.15	Ndufaf6	chr4	protein_coding	NADH:ubiquinone oxidoreductase complex assembly factor 6
chr4	11070322	11073187	-	11070322	11073144	A5SS	0.33	50	50	ENSMUST00000058183.9	ENSMUSG00000050323.15	Ndufaf6	chr4	protein_coding	NADH:ubiquinone oxidoreductase complex assembly factor 6
chr4	11070322	11073187	-	11070322	11073140	A5SS	0.33	50	50	ENSMUST00000126468.8	ENSMUSG00000050323.15	Ndufaf6	chr4	protein_coding	NADH:ubiquinone oxidoreductase complex assembly factor 6
chr4	11124419	11125998	+	11122915	11125998	A5SS	0.5	50	50	ENSMUST00000151138.8	ENSMUSG00000086765.8	Gm11827	chr4	lncRNA	predicted gene 11827
chr4	11165447;11167934	11167897;11169710	+	11165447	11169710	cassetteExon	0.5	100	100	ENSMUST00000029865.4	ENSMUSG00000028211.12	Trp53inp1	chr4	protein_coding	transformation related protein 53 inducible nuclear protein 1
chr4	11165447	11169710	+	11165447	11167897	3pMXE	0.5	50	50	ENSMUST00000132346.2	ENSMUSG00000028211.12	Trp53inp1	chr4	protein_coding	transformation related protein 53 inducible nuclear protein 1
chr4	11192717	11192818	+	11192717	11192815	A3SS	0.5	50	50	ENSMUST00000145430.8	ENSMUSG00000028212.17	Ccne2	chr4	protein_coding	cyclin E2
chr4	11191807	11192681	+	11191544	11192681	A5SS	0.33	50	50	ENSMUST00000145430.8	ENSMUSG00000028212.17	Ccne2	chr4	protein_coding	cyclin E2
chr4	11191815	11192681	+	11191544	11192681	A5SS	0.33	50	50	ENSMUST00000145430.8	ENSMUSG00000028212.17	Ccne2	chr4	protein_coding	cyclin E2
chr4	11191807	11192681	+	11191815	11192681	A5SS	0.33	50	50	ENSMUST00000144438.8	ENSMUSG00000028212.17	Ccne2	chr4	protein_coding	cyclin E2
chr4	11209465	11213706	-	11209465;11211932	11211882;11213706	ES	0.33	50	50	ENSMUST00000044616.10	ENSMUSG00000040738.11	Ints8	chr4	protein_coding	integrator complex subunit 8
chr4	11211932;11212931	11212792;11213706	-	11211932	11213706	cassetteExon	0.5	100	100	ENSMUST00000044616.10	ENSMUSG00000040738.11	Ints8	chr4	protein_coding	integrator complex subunit 8
chr4	11209465	11213706	-	11209465	11211882	5pMXE	0.5	50	50	ENSMUST00000136545.8	ENSMUSG00000040738.11	Ints8	chr4	protein_coding	integrator complex subunit 8
chr4	11212931	11213706	-	11209465	11213706	A3SS	0.33	50	50	ENSMUST00000108318.3	ENSMUSG00000040738.11	Ints8	chr4	protein_coding	integrator complex subunit 8
chr4	11204583;11209276	11208826;11209392	-	11204583	11209392	cassetteExon	0.5	100	100	ENSMUST00000145252.8	ENSMUSG00000040738.11	Ints8	chr4	protein_coding	integrator complex subunit 8
chr4	11290289	11292554	-	11290289;11290522	11290391;11292554	ES	0.5	50	50	ENSMUST00000139385.8	ENSMUSG00000045205.17	Dpy19l4	chr4	protein_coding	dpy-19-like 4 (C. elegans)
chr4	11281124;11285173	11285054;11287475	-	11281124	11287475	cassetteExon	0.5	100	100	ENSMUST00000139385.8	ENSMUSG00000045205.17	Dpy19l4	chr4	protein_coding	dpy-19-like 4 (C. elegans)
chr4	11281124;11285173	11285078;11287475	-	11281124	11287475	cassetteExon	0.5	100	100	ENSMUST00000139385.8	ENSMUSG00000045205.17	Dpy19l4	chr4	protein_coding	dpy-19-like 4 (C. elegans)
chr4	11292686	11295936	-	11292688	11295936	A3SS	0.5	50	50	ENSMUST00000139385.8	ENSMUSG00000045205.17	Dpy19l4	chr4	protein_coding	dpy-19-like 4 (C. elegans)
chr4	11317180;11319818	11319786;11322000	-	11317180	11322000	cassetteExon	0.5	100	100	ENSMUST00000084892.12	ENSMUSG00000045205.17	Dpy19l4	chr4	protein_coding	dpy-19-like 4 (C. elegans)
chr4	11281124	11285078	-	11281124	11285054	A5SS	0.33	50	50	ENSMUST00000084892.12	ENSMUSG00000045205.17	Dpy19l4	chr4	protein_coding	dpy-19-like 4 (C. elegans)
chr4	11317180	11321715	-	11317180	11322000	A5SS	0.33	50	50	ENSMUST00000084892.12	ENSMUSG00000045205.17	Dpy19l4	chr4	protein_coding	dpy-19-like 4 (C. elegans)
chr4	11317180	11321715	-	11317180	11319786	A5SS&ES	0.33	50	50	ENSMUST00000144941.2	ENSMUSG00000045205.17	Dpy19l4	chr4	protein_coding	dpy-19-like 4 (C. elegans)
chr4	11333473	11353295	-	11333473;11344262	11344112;11353295	ES	0.33	50	50	ENSMUST00000043781.14	ENSMUSG00000040728.16	Esrp1	chr4	protein_coding	epithelial splicing regulatory protein 1
chr4	11333473;11338831	11338722;11344112	-	11333473	11344112	cassetteExon	0.5	100	100	ENSMUST00000043781.14	ENSMUSG00000040728.16	Esrp1	chr4	protein_coding	epithelial splicing regulatory protein 1
chr4	11333473;11338831	11338722;11353295	-	11333473;11344262	11344112;11353295	MXE	0.5	100	100	ENSMUST00000043781.14	ENSMUSG00000040728.16	Esrp1	chr4	protein_coding	epithelial splicing regulatory protein 1
chr4	11342480	11344112	-	11333473	11344112	A3SS	0.33	50	50	ENSMUST00000043781.14	ENSMUSG00000040728.16	Esrp1	chr4	protein_coding	epithelial splicing regulatory protein 1
chr4	11353463	11357460	-	11353463	11357472	A5SS	0.5	50	50	ENSMUST00000043781.14	ENSMUSG00000040728.16	Esrp1	chr4	protein_coding	epithelial splicing regulatory protein 1
chr4	11333473;11338831	11338722;11353295	-	11333473	11353295	cassetteExon	0.5	100	100	ENSMUST00000108313.8	ENSMUSG00000040728.16	Esrp1	chr4	protein_coding	epithelial splicing regulatory protein 1
chr4	11338831	11353295	-	11338831;11344262	11344112;11353295	ES	0.33	50	50	ENSMUST00000108311.9	ENSMUSG00000040728.16	Esrp1	chr4	protein_coding	epithelial splicing regulatory protein 1
chr4	11342480	11344112	-	11338831	11344112	A3SS	0.33	50	50	ENSMUST00000108311.9	ENSMUSG00000040728.16	Esrp1	chr4	protein_coding	epithelial splicing regulatory protein 1
chr4	11514168;11516978	11516829;11518926	+	11514168	11518926	cassetteExon	0.5	100	100	ENSMUST00000055372.14	ENSMUSG00000040720.16	Virma	chr4	protein_coding	vir like m6A methyltransferase associated
chr4	11569932	11593621	+	11569932;11583722	11583677;11593621	ES	0.33	50	50	ENSMUST00000179498.2	ENSMUSG00000078773.12	Rad54b	chr4	protein_coding	RAD54 homolog B (S. cerevisiae)
chr4	11569932	11578634	+	11569932	11583677	A3SS	0.33	50	50	ENSMUST00000179498.2	ENSMUSG00000078773.12	Rad54b	chr4	protein_coding	RAD54 homolog B (S. cerevisiae)
chr4	11576767	11593621	+	11583722	11593621	A5SS&ES	0.33	50	50	ENSMUST00000179498.2	ENSMUSG00000078773.12	Rad54b	chr4	protein_coding	RAD54 homolog B (S. cerevisiae)
chr4	11580107	11583677	+	11569932	11583677	A5SS	0.5	50	50	ENSMUST00000179498.2	ENSMUSG00000078773.12	Rad54b	chr4	protein_coding	RAD54 homolog B (S. cerevisiae)
chr4	11569932	11593621	+	11569932	11583677	3pMXE	0.33	50	50	ENSMUST00000095145.12	ENSMUSG00000078773.12	Rad54b	chr4	protein_coding	RAD54 homolog B (S. cerevisiae)
chr4	11569932	11593621	+	11569932	11578634	3pMXE	0.33	50	50	ENSMUST00000108306.9	ENSMUSG00000078773.12	Rad54b	chr4	protein_coding	RAD54 homolog B (S. cerevisiae)
chr4	11599901	11601633	+	11599901	11601551	A3SS	0.5	50	50	ENSMUST00000070755.13	ENSMUSG00000078773.12	Rad54b	chr4	protein_coding	RAD54 homolog B (S. cerevisiae)
chr4	11576767	11593621	+	11569932	11593621	A5SS	0.33	50	50	ENSMUST00000070755.13	ENSMUSG00000078773.12	Rad54b	chr4	protein_coding	RAD54 homolog B (S. cerevisiae)
chr4	11609598	11610304	+	11609469	11610304	A5SS	0.5	50	50	ENSMUST00000070755.13	ENSMUSG00000078773.12	Rad54b	chr4	protein_coding	RAD54 homolog B (S. cerevisiae)
chr4	11962233;11965648	11965614;11966302	-	11962233	11966302	cassetteExon	0.5	100	100	ENSMUST00000108297.3	ENSMUSG00000049225.15	Pdp1	chr4	protein_coding	pyruvate dehyrogenase phosphatase catalytic subunit 1
chr4	11962233	11965884	-	11962233	11966302	A5SS	0.33	50	50	ENSMUST00000108297.3	ENSMUSG00000049225.15	Pdp1	chr4	protein_coding	pyruvate dehyrogenase phosphatase catalytic subunit 1
chr4	11962233	11965884	-	11962233	11965614	5pMXE	0.33	50	50	ENSMUST00000108301.8	ENSMUSG00000049225.15	Pdp1	chr4	protein_coding	pyruvate dehyrogenase phosphatase catalytic subunit 1
chr4	11962233	11966302	-	11962233	11965614	5pMXE	0.33	50	50	ENSMUST00000108301.8	ENSMUSG00000049225.15	Pdp1	chr4	protein_coding	pyruvate dehyrogenase phosphatase catalytic subunit 1
chr4	11962233	11965884	-	11962233;11965648	11965614;11965884	ES	0.5	50	50	ENSMUST00000095144.10	ENSMUSG00000049225.15	Pdp1	chr4	protein_coding	pyruvate dehyrogenase phosphatase catalytic subunit 1
chr4	11965648	11966302	-	11965648	11965884	5pMXE	0.5	50	50	ENSMUST00000095144.10	ENSMUSG00000049225.15	Pdp1	chr4	protein_coding	pyruvate dehyrogenase phosphatase catalytic subunit 1
chr4	11966683	11976444	+	11966683	11993865	A3SS	0.5	50	50	ENSMUST00000154194.2	ENSMUSG00000085614.2	1700123M08Rik	chr4	lncRNA	RIKEN cDNA 1700123M08 gene
chr4	11980408	11993865	+	11966683	11993865	A5SS	0.5	50	50	ENSMUST00000154194.2	ENSMUSG00000085614.2	1700123M08Rik	chr4	lncRNA	RIKEN cDNA 1700123M08 gene
chr4	11980408	11981462	+	11980408	11993865	A3SS	0.5	50	50	ENSMUST00000146154.2	ENSMUSG00000085614.2	1700123M08Rik	chr4	lncRNA	RIKEN cDNA 1700123M08 gene
chr4	12058577;12059895	12059788;12061755	-	12058577	12061755	cassetteExon	0.5	100	100	ENSMUST00000050686.10	ENSMUSG00000049488.15	Tmem67	chr4	protein_coding	transmembrane protein 67
chr4	12075525	12075623	-	12075529	12075623	A3SS	0.5	50	50	ENSMUST00000050686.10	ENSMUSG00000049488.15	Tmem67	chr4	protein_coding	transmembrane protein 67
chr4	12140605	12143410	+	12140605	12144652	A3SS	0.5	50	50	ENSMUST00000146416.2	ENSMUSG00000046667.15	Rbm12b1	chr4	protein_coding	RNA binding motif protein 12 B1
chr4	12143459	12144568	+	12143459	12144002	A3SS	0.5	50	50	ENSMUST00000050069.9	ENSMUSG00000046667.15	Rbm12b1	chr4	protein_coding	RNA binding motif protein 12 B1
chr4	12164192;12164274	12164269;12168223	-	12164192;12165771	12165766;12168223	MXE	0.5	100	100	ENSMUST00000108285.9	ENSMUSG00000028218.20	Cibar1	chr4	protein_coding	CBY1 interacting BAR domain containing 1
chr4	12169033;12169978	12169958;12170984	-	12169033	12170984	cassetteExon	0.5	100	100	ENSMUST00000108285.9	ENSMUSG00000028218.20	Cibar1	chr4	protein_coding	CBY1 interacting BAR domain containing 1
chr4	12169058	12170984	-	12169033	12170984	A3SS	0.33	50	50	ENSMUST00000108285.9	ENSMUSG00000028218.20	Cibar1	chr4	protein_coding	CBY1 interacting BAR domain containing 1
chr4	12157764	12161007	-	12157764	12164088	A5SS	0.5	50	50	ENSMUST00000108285.9	ENSMUSG00000028218.20	Cibar1	chr4	protein_coding	CBY1 interacting BAR domain containing 1
chr4	12164192	12168179	-	12164192	12165766	A5SS&ES	0.25	50	50	ENSMUST00000108285.9	ENSMUSG00000028218.20	Cibar1	chr4	protein_coding	CBY1 interacting BAR domain containing 1
chr4	12164192	12168229	-	12164192	12165766	A5SS&ES	0.25	50	50	ENSMUST00000108285.9	ENSMUSG00000028218.20	Cibar1	chr4	protein_coding	CBY1 interacting BAR domain containing 1
chr4	12164192	12168179	-	12164192	12164269	A5SS&ES	0.25	50	50	ENSMUST00000177837.8	ENSMUSG00000028218.20	Cibar1	chr4	protein_coding	CBY1 interacting BAR domain containing 1
chr4	12164192	12168229	-	12164192	12164269	A5SS&ES	0.25	50	50	ENSMUST00000177837.8	ENSMUSG00000028218.20	Cibar1	chr4	protein_coding	CBY1 interacting BAR domain containing 1
chr4	12164192	12168179	-	12164192	12168229	A5SS	0.25	50	50	ENSMUST00000087052.11	ENSMUSG00000028218.20	Cibar1	chr4	protein_coding	CBY1 interacting BAR domain containing 1
chr4	12169058	12170984	-	12169978	12170984	A3SS&ES	0.33	50	50	ENSMUST00000154416.3	ENSMUSG00000028218.20	Cibar1	chr4	protein_coding	CBY1 interacting BAR domain containing 1
chr4	12164274	12168223	-	12165771	12168223	3pMXE	0.5	50	50	ENSMUST00000152219.2	ENSMUSG00000028218.20	Cibar1	chr4	protein_coding	CBY1 interacting BAR domain containing 1
chr4	12918065	12974730	+	12918065;12963023	12962942;12974730	ES	0.5	50	50	ENSMUST00000143186.8	ENSMUSG00000055963.13	Triqk	chr4	protein_coding	triple QxxK/R motif containing
chr4	12918065	12962945	+	12918065	12962942	A3SS	0.33	50	50	ENSMUST00000143186.8	ENSMUSG00000055963.13	Triqk	chr4	protein_coding	triple QxxK/R motif containing
chr4	12918065	12974730	+	12918065;12963023	12962945;12974730	ES	0.5	50	50	ENSMUST00000183345.2	ENSMUSG00000055963.13	Triqk	chr4	protein_coding	triple QxxK/R motif containing
chr4	13751748	13835633	+	13743729	13835633	A5SS	0.25	50	50	ENSMUST00000006761.10	ENSMUSG00000006586.16	Runx1t1	chr4	protein_coding	RUNX1 translocation partner 1
chr4	13771545	13835633	+	13743729	13835633	A5SS	0.25	50	50	ENSMUST00000006761.10	ENSMUSG00000006586.16	Runx1t1	chr4	protein_coding	RUNX1 translocation partner 1
chr4	13785141	13835633	+	13743729	13835633	A5SS	0.25	50	50	ENSMUST00000006761.10	ENSMUSG00000006586.16	Runx1t1	chr4	protein_coding	RUNX1 translocation partner 1
chr4	13889273	13889612	+	13881240	13889612	A5SS	0.5	50	50	ENSMUST00000006761.10	ENSMUSG00000006586.16	Runx1t1	chr4	protein_coding	RUNX1 translocation partner 1
chr4	13751748;13771545	13771376;13835633	+	13751748	13835633	cassetteExon	0.5	100	100	ENSMUST00000150583.8	ENSMUSG00000006586.16	Runx1t1	chr4	protein_coding	RUNX1 translocation partner 1
chr4	13785141	13835633	+	13751748	13835633	A5SS	0.25	50	50	ENSMUST00000150583.8	ENSMUSG00000006586.16	Runx1t1	chr4	protein_coding	RUNX1 translocation partner 1
chr4	13785141	13835633	+	13771545	13835633	A5SS	0.33	50	50	ENSMUST00000105566.9	ENSMUSG00000006586.16	Runx1t1	chr4	protein_coding	RUNX1 translocation partner 1
chr4	13751748	13835633	+	13771545	13835633	5pMXE	0.25	50	50	ENSMUST00000098257.10	ENSMUSG00000006586.16	Runx1t1	chr4	protein_coding	RUNX1 translocation partner 1
chr4	14621424	14621645	-	14621424	14621689	A5SS	0.5	50	50	ENSMUST00000042221.14	ENSMUSG00000040569.14	Slc26a7	chr4	protein_coding	solute carrier family 26, member 7
chr4	14818488;14819215	14819095;14822692	-	14818488	14822692	cassetteExon	0.5	100	100	ENSMUST00000117268.9	ENSMUSG00000040550.18	Otud6b	chr4	protein_coding	OTU domain containing 6B
chr4	14930770	14936441	+	14930039	14936441	A5SS	0.33	50	50	ENSMUST00000137532.8	ENSMUSG00000086587.8	Gm11837	chr4	lncRNA	predicted gene 11837
chr4	14930774	14936441	+	14930039	14936441	A5SS	0.33	50	50	ENSMUST00000137532.8	ENSMUSG00000086587.8	Gm11837	chr4	lncRNA	predicted gene 11837
chr4	14930774	14936441	+	14930770	14936441	A5SS	0.33	50	50	ENSMUST00000136992.8	ENSMUSG00000086587.8	Gm11837	chr4	lncRNA	predicted gene 11837
chr4	15933095	15944463	-	15933095	15945283	A5SS	0.5	50	50	ENSMUST00000029877.9	ENSMUSG00000028223.9	Decr1	chr4	protein_coding	2,4-dienoyl CoA reductase 1, mitochondrial
chr4	15944363	15944463	-	15933095	15944463	A3SS	0.5	50	50	ENSMUST00000150464.2	ENSMUSG00000028223.9	Decr1	chr4	protein_coding	2,4-dienoyl CoA reductase 1, mitochondrial
chr4	16002021	16005386	-	16002021	16005357	A5SS	0.5	50	50	ENSMUST00000037198.10	ENSMUSG00000041153.10	Osgin2	chr4	protein_coding	oxidative stress induced growth inhibitor family member 2
chr4	16129109;16131646	16131523;16132777	-	16129109	16132777	cassetteExon	0.5	100	100	ENSMUST00000037035.12	ENSMUSG00000041135.16	Ripk2	chr4	protein_coding	receptor (TNFRSF)-interacting serine-threonine kinase 2
chr4	18093468	18110428	+	18093468;18101136	18101007;18110428	ES	0.5	50	50	ENSMUST00000183662.8	ENSMUSG00000028226.16	Mmp16	chr4	protein_coding	matrix metallopeptidase 16
chr4	17853487	17853646	+	17853097	17853646	A5SS	0.5	50	50	ENSMUST00000183662.8	ENSMUSG00000028226.16	Mmp16	chr4	protein_coding	matrix metallopeptidase 16
chr4	17934114	17987572	+	17853852	17987572	A5SS	0.5	50	50	ENSMUST00000183662.8	ENSMUSG00000028226.16	Mmp16	chr4	protein_coding	matrix metallopeptidase 16
chr4	19595159	19599614	+	19595159	19598471	3pMXE	0.5	50	50	ENSMUST00000108253.8	ENSMUSG00000028229.12	Rmdn1	chr4	protein_coding	regulator of microtubule dynamics 1
chr4	19605536	19608896	+	19605536	19606085	3pMXE	0.5	50	50	ENSMUST00000029888.4	ENSMUSG00000028229.12	Rmdn1	chr4	protein_coding	regulator of microtubule dynamics 1
chr4	19719660	19720142	-	19719660	19719793	5pMXE	0.5	50	50	ENSMUST00000124319.8	ENSMUSG00000086071.8	Gm12354	chr4	lncRNA	predicted gene 12354
chr4	19910758	19916764	-	19910758	19922368	A5SS	0.5	50	50	ENSMUST00000029900.6	ENSMUSG00000028238.7	Atp6v0d2	chr4	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit D2
chr4	19979820	19983188	-	19979820;19981290	19981245;19983188	ES	0.5	50	50	ENSMUST00000239390.2	ENSMUSG00000086332.3	4930480G23Rik	chr4	transcribed_unitary_pseudogene	RIKEN cDNA 4930480G23 gene
chr4	19983616	20005164	-	19983616;20001628	20001493;20005164	ES	0.5	50	50	ENSMUST00000239390.2	ENSMUSG00000086332.3	4930480G23Rik	chr4	transcribed_unitary_pseudogene	RIKEN cDNA 4930480G23 gene
chr4	19942976	19979665	-	19936381	19979665	A3SS	0.5	50	50	ENSMUST00000239390.2	ENSMUSG00000086332.3	4930480G23Rik	chr4	transcribed_unitary_pseudogene	RIKEN cDNA 4930480G23 gene
chr4	20008643	20014631	+	20008346	20014631	A5SS	0.5	50	50	ENSMUST00000125799.8	ENSMUSG00000073988.14	Ttpa	chr4	protein_coding	tocopherol (alpha) transfer protein
chr4	20023894	20028408	+	20023895	20028408	A5SS	0.5	50	50	ENSMUST00000121491.8	ENSMUSG00000073988.14	Ttpa	chr4	protein_coding	tocopherol (alpha) transfer protein
chr4	20245917	20282861	-	20158400	20282861	A3SS	0.5	50	50	ENSMUST00000119374.8	ENSMUSG00000055761.15	Nkain3	chr4	protein_coding	Na+/K+ transporting ATPase interacting 3
chr4	21679947	21683418	-	21679947	21683347	A5SS	0.5	50	50	ENSMUST00000144160.8	ENSMUSG00000040478.15	Prdm13	chr4	protein_coding	PR domain containing 13
chr4	21683538	21685555	-	21683538	21683850	A5SS&ES	0.5	50	50	ENSMUST00000144160.8	ENSMUSG00000040478.15	Prdm13	chr4	protein_coding	PR domain containing 13
chr4	21683981	21685555	-	21683981	21685511	A5SS	0.5	50	50	ENSMUST00000144160.8	ENSMUSG00000040478.15	Prdm13	chr4	protein_coding	PR domain containing 13
chr4	21683538;21683981	21683850;21685555	-	21683538	21685555	cassetteExon	0.5	100	100	ENSMUST00000139255.8	ENSMUSG00000040478.15	Prdm13	chr4	protein_coding	PR domain containing 13
chr4	21730503	21732489	+	21730503;21732302	21732218;21732489	ES	0.5	50	50	ENSMUST00000065928.11	ENSMUSG00000028252.21	Ccnc	chr4	protein_coding	cyclin C
chr4	21746774	21748137	+	21746774;21747576	21747483;21748137	ES	0.5	50	50	ENSMUST00000065928.11	ENSMUSG00000028252.21	Ccnc	chr4	protein_coding	cyclin C
chr4	21735464	21740592	+	21735468	21740592	A5SS	0.5	50	50	ENSMUST00000065928.11	ENSMUSG00000028252.21	Ccnc	chr4	protein_coding	cyclin C
chr4	21746774	21759425	+	21746774	21748137	3pMXE	0.33	50	50	ENSMUST00000102997.8	ENSMUSG00000028252.21	Ccnc	chr4	protein_coding	cyclin C
chr4	21746774	21747483	+	21746774	21759425	A3SS	0.33	50	50	ENSMUST00000120679.8	ENSMUSG00000028252.21	Ccnc	chr4	protein_coding	cyclin C
chr4	21746774	21748137	+	21746774	21747483	3pMXE	0.33	50	50	ENSMUST00000123294.8	ENSMUSG00000028252.21	Ccnc	chr4	protein_coding	cyclin C
chr4	21781908	21782883	+	21781908	21782403	3pMXE	0.5	50	50	ENSMUST00000156589.9	ENSMUSG00000040455.18	Usp45	chr4	protein_coding	ubiquitin specific petidase 45
chr4	21780450	21781739	+	21780450	21781736	A3SS	0.5	50	50	ENSMUST00000156589.9	ENSMUSG00000040455.18	Usp45	chr4	protein_coding	ubiquitin specific petidase 45
chr4	21776317	21780341	+	21767244	21780341	A5SS	0.5	50	50	ENSMUST00000156589.9	ENSMUSG00000040455.18	Usp45	chr4	protein_coding	ubiquitin specific petidase 45
chr4	21797390	21804226	+	21797390;21798735	21798605;21804226	ES	0.5	50	50	ENSMUST00000065111.15	ENSMUSG00000040455.18	Usp45	chr4	protein_coding	ubiquitin specific petidase 45
chr4	21798735	21810742	+	21798735;21804313	21804226;21810742	ES	0.5	50	50	ENSMUST00000065111.15	ENSMUSG00000040455.18	Usp45	chr4	protein_coding	ubiquitin specific petidase 45
chr4	21816938	21824417	+	21816938;21817644	21817501;21824417	ES	0.5	50	50	ENSMUST00000065111.15	ENSMUSG00000040455.18	Usp45	chr4	protein_coding	ubiquitin specific petidase 45
chr4	21797390	21804226	+	21797390	21798605	3pMXE	0.5	50	50	ENSMUST00000148304.8	ENSMUSG00000040455.18	Usp45	chr4	protein_coding	ubiquitin specific petidase 45
chr4	21804313	21810742	+	21804313	21816882	A3SS	0.5	50	50	ENSMUST00000137293.8	ENSMUSG00000040455.18	Usp45	chr4	protein_coding	ubiquitin specific petidase 45
chr4	21815398	21816882	+	21804313	21816882	A5SS	0.5	50	50	ENSMUST00000137293.8	ENSMUSG00000040455.18	Usp45	chr4	protein_coding	ubiquitin specific petidase 45
chr4	21797390;21804313	21804226;21810742	+	21797390;21798735	21798605;21810742	MXE	0.5	100	100	ENSMUST00000148647.3	ENSMUSG00000040455.18	Usp45	chr4	protein_coding	ubiquitin specific petidase 45
chr4	21797390;21804313	21804226;21816882	+	21797390;21815398	21798605;21816882	MXE	0.5	100	100	ENSMUST00000148647.3	ENSMUSG00000040455.18	Usp45	chr4	protein_coding	ubiquitin specific petidase 45
chr4	21798735;21804313	21804226;21816882	+	21798735;21815398	21810742;21816882	MXE	0.5	100	100	ENSMUST00000148647.3	ENSMUSG00000040455.18	Usp45	chr4	protein_coding	ubiquitin specific petidase 45
chr4	21848139	21854245	+	21848139	21854347	A3SS	0.5	50	50	ENSMUST00000029911.12	ENSMUSG00000028248.16	Pnisr	chr4	protein_coding	PNN interacting serine/arginine-rich
chr4	21857368	21857614	+	21857368	21859084	A3SS	0.5	50	50	ENSMUST00000029911.12	ENSMUSG00000028248.16	Pnisr	chr4	protein_coding	PNN interacting serine/arginine-rich
chr4	21859307	21860878	+	21859307	21860820	A3SS	0.5	50	50	ENSMUST00000029911.12	ENSMUSG00000028248.16	Pnisr	chr4	protein_coding	PNN interacting serine/arginine-rich
chr4	21871608	21873589	+	21871608	21873586	A3SS	0.5	50	50	ENSMUST00000029911.12	ENSMUSG00000028248.16	Pnisr	chr4	protein_coding	PNN interacting serine/arginine-rich
chr4	21874230	21874913	+	21874672	21874913	A5SS	0.5	50	50	ENSMUST00000029911.12	ENSMUSG00000028248.16	Pnisr	chr4	protein_coding	PNN interacting serine/arginine-rich
chr4	21936768;21948888	21948692;21982386	+	21936768	21982386	cassetteExon	0.5	100	100	ENSMUST00000124440.8	ENSMUSG00000028246.14	Faxc	chr4	protein_coding	failed axon connections homolog
chr4	21958667	21982386	+	21936768	21982386	A5SS	0.33	50	50	ENSMUST00000124440.8	ENSMUSG00000028246.14	Faxc	chr4	protein_coding	failed axon connections homolog
chr4	21948888	21982386	+	21948888;21958667	21958444;21982386	ES	0.33	50	50	ENSMUST00000029908.8	ENSMUSG00000028246.14	Faxc	chr4	protein_coding	failed axon connections homolog
chr4	21958667	21959152	+	21958667	21982386	A3SS	0.5	50	50	ENSMUST00000029908.8	ENSMUSG00000028246.14	Faxc	chr4	protein_coding	failed axon connections homolog
chr4	21936768	21982386	+	21936768	21948692	3pMXE	0.5	50	50	ENSMUST00000123319.8	ENSMUSG00000028246.14	Faxc	chr4	protein_coding	failed axon connections homolog
chr4	22375770	22376496	+	22375770	22376633	A3SS	0.5	50	50	ENSMUST00000131972.8	ENSMUSG00000040410.15	Fbxl4	chr4	protein_coding	F-box and leucine-rich repeat protein 4
chr4	22427462;22433258	22433146;22433567	+	22427462	22433567	cassetteExon	0.5	100	100	ENSMUST00000039234.10	ENSMUSG00000040410.15	Fbxl4	chr4	protein_coding	F-box and leucine-rich repeat protein 4
chr4	22386252	22390714	+	22386252	22390677	A3SS	0.5	50	50	ENSMUST00000039234.10	ENSMUSG00000040410.15	Fbxl4	chr4	protein_coding	F-box and leucine-rich repeat protein 4
chr4	22423927	22427150	+	22422788	22427150	A5SS	0.5	50	50	ENSMUST00000039234.10	ENSMUSG00000040410.15	Fbxl4	chr4	protein_coding	F-box and leucine-rich repeat protein 4
chr4	24507444	24517060	+	24507444;24508518	24508405;24517060	ES	0.5	50	50	ENSMUST00000173079.8	ENSMUSG00000045751.17	Mms22l	chr4	protein_coding	MMS22-like, DNA repair protein
chr4	24521303	24532903	+	24521303;24529163	24529044;24532903	ES	0.5	50	50	ENSMUST00000173079.8	ENSMUSG00000045751.17	Mms22l	chr4	protein_coding	MMS22-like, DNA repair protein
chr4	24578903	24580051	+	24578903	24580054	A3SS	0.5	50	50	ENSMUST00000173079.8	ENSMUSG00000045751.17	Mms22l	chr4	protein_coding	MMS22-like, DNA repair protein
chr4	24588372	24596138	+	24588372;24591245	24591034;24596138	ES	0.5	50	50	ENSMUST00000108222.9	ENSMUSG00000045751.17	Mms22l	chr4	protein_coding	MMS22-like, DNA repair protein
chr4	24588372	24591152	+	24588372	24591034	A3SS	0.33	50	50	ENSMUST00000108222.9	ENSMUSG00000045751.17	Mms22l	chr4	protein_coding	MMS22-like, DNA repair protein
chr4	24521303	24532903	+	24521303	24529044	3pMXE	0.5	50	50	ENSMUST00000172622.8	ENSMUSG00000045751.17	Mms22l	chr4	protein_coding	MMS22-like, DNA repair protein
chr4	24588372;24591245	24591152;24596138	+	24588372	24596138	cassetteExon	0.5	100	100	ENSMUST00000131282.4	ENSMUSG00000045751.17	Mms22l	chr4	protein_coding	MMS22-like, DNA repair protein
chr4	24588372	24596138	+	24588372	24591152	3pMXE	0.33	50	50	ENSMUST00000123984.3	ENSMUSG00000045751.17	Mms22l	chr4	protein_coding	MMS22-like, DNA repair protein
chr4	24682270	24743858	-	24682270;24709051	24708953;24743858	ES	0.33	50	50	ENSMUST00000108214.9	ENSMUSG00000040387.17	Klhl32	chr4	protein_coding	kelch-like 32
chr4	24629352;24632701	24632643;24682055	-	24629352	24682055	cassetteExon	0.5	100	100	ENSMUST00000108214.9	ENSMUSG00000040387.17	Klhl32	chr4	protein_coding	kelch-like 32
chr4	24629352;24632701	24632643;24708953	-	24629352;24682270	24682055;24708953	MXE	0.5	100	100	ENSMUST00000108214.9	ENSMUSG00000040387.17	Klhl32	chr4	protein_coding	kelch-like 32
chr4	24709051;24711615	24711448;24743858	-	24709051	24743858	cassetteExon	0.5	100	100	ENSMUST00000108214.9	ENSMUSG00000040387.17	Klhl32	chr4	protein_coding	kelch-like 32
chr4	24650266	24682055	-	24629352	24682055	A3SS	0.33	50	50	ENSMUST00000108214.9	ENSMUSG00000040387.17	Klhl32	chr4	protein_coding	kelch-like 32
chr4	24632701	24682055	-	24632701;24650266	24649540;24682055	ES	0.33	50	50	ENSMUST00000108218.10	ENSMUSG00000040387.17	Klhl32	chr4	protein_coding	kelch-like 32
chr4	24650266	24675151	-	24650266	24682055	A5SS	0.5	50	50	ENSMUST00000108218.10	ENSMUSG00000040387.17	Klhl32	chr4	protein_coding	kelch-like 32
chr4	24632701	24708953	-	24632701;24682270	24682055;24708953	ES	0.5	50	50	ENSMUST00000150920.8	ENSMUSG00000040387.17	Klhl32	chr4	protein_coding	kelch-like 32
chr4	24650266	24682055	-	24632701	24682055	A3SS	0.33	50	50	ENSMUST00000150920.8	ENSMUSG00000040387.17	Klhl32	chr4	protein_coding	kelch-like 32
chr4	24632701	24649540	-	24632701	24682055	A5SS	0.33	50	50	ENSMUST00000150920.8	ENSMUSG00000040387.17	Klhl32	chr4	protein_coding	kelch-like 32
chr4	24629352;24682270	24682055;24743858	-	24629352;24709051	24632643;24743858	MXE	0.5	100	100	ENSMUST00000140652.8	ENSMUSG00000040387.17	Klhl32	chr4	protein_coding	kelch-like 32
chr4	24632701;24682270	24682055;24743858	-	24632701;24709051	24708953;24743858	MXE	0.5	100	100	ENSMUST00000140652.8	ENSMUSG00000040387.17	Klhl32	chr4	protein_coding	kelch-like 32
chr4	24632701	24649540	-	24632701	24708953	A5SS	0.33	50	50	ENSMUST00000140652.8	ENSMUSG00000040387.17	Klhl32	chr4	protein_coding	kelch-like 32
chr4	24632701;24709051	24708953;24743858	-	24632701;24682270	24649540;24743858	MXE	0.5	100	100	ENSMUST00000084781.6	ENSMUSG00000040387.17	Klhl32	chr4	protein_coding	kelch-like 32
chr4	24711615	24743858	-	24682270	24743858	A3SS	0.33	50	50	ENSMUST00000084781.6	ENSMUSG00000040387.17	Klhl32	chr4	protein_coding	kelch-like 32
chr4	24964627	24966383	-	24963065	24966383	A3SS	0.5	50	50	ENSMUST00000133431.2	ENSMUSG00000046219.10	C230012O17Rik	chr4	lncRNA	RIKEN cDNA C230012O17 gene
chr4	24966624	25031432	+	24966624	25007130	3pMXE	0.5	50	50	ENSMUST00000151006.2	ENSMUSG00000040372.3	Gpr63	chr4	protein_coding	G protein-coupled receptor 63
chr4	24973684	25007130	+	24966624	25007130	A5SS	0.5	50	50	ENSMUST00000151006.2	ENSMUSG00000040372.3	Gpr63	chr4	protein_coding	G protein-coupled receptor 63
chr4	25214787;25241950	25241886;25242708	-	25214787	25242708	cassetteExon	0.5	100	100	ENSMUST00000029922.14	ENSMUSG00000028259.14	Fhl5	chr4	protein_coding	four and a half LIM domains 5
chr4	25278701	25280623	-	25278701;25279374	25279346;25280623	ES	0.5	50	50	ENSMUST00000142949.8	ENSMUSG00000040359.15	Ufl1	chr4	protein_coding	UFM1 specific ligase 1
chr4	25280719	25281676	-	25280768	25281676	A3SS	0.5	50	50	ENSMUST00000142949.8	ENSMUSG00000040359.15	Ufl1	chr4	protein_coding	UFM1 specific ligase 1
chr4	25620820	25799589	-	25620820;25709114	25709028;25799589	ES	0.33	50	50	ENSMUST00000084770.5	ENSMUSG00000055373.9	Fut9	chr4	protein_coding	fucosyltransferase 9
chr4	25799294	25799589	-	25709114	25799589	A3SS	0.33	50	50	ENSMUST00000084770.5	ENSMUSG00000055373.9	Fut9	chr4	protein_coding	fucosyltransferase 9
chr4	25799294	25799589	-	25620820	25799589	A3SS	0.33	50	50	ENSMUST00000108199.2	ENSMUSG00000055373.9	Fut9	chr4	protein_coding	fucosyltransferase 9
chr4	26329162	26340417	-	26329162;26336730	26336621;26340417	ES	0.5	50	50	ENSMUST00000041374.8	ENSMUSG00000040520.8	Manea	chr4	protein_coding	mannosidase, endo-alpha
chr4	26340634	26346597	-	26340998	26346597	A3SS	0.5	50	50	ENSMUST00000041374.8	ENSMUSG00000040520.8	Manea	chr4	protein_coding	mannosidase, endo-alpha
chr4	26340998	26346775	-	26340998	26346597	A5SS	0.5	50	50	ENSMUST00000041374.8	ENSMUSG00000040520.8	Manea	chr4	protein_coding	mannosidase, endo-alpha
chr4	28943378	28947528	+	28943378	28946219	3pMXE	0.25	50	50	ENSMUST00000080934.11	ENSMUSG00000028289.13	Epha7	chr4	protein_coding	Eph receptor A7
chr4	28943378	28947540	+	28943378	28946219	3pMXE	0.25	50	50	ENSMUST00000080934.11	ENSMUSG00000028289.13	Epha7	chr4	protein_coding	Eph receptor A7
chr4	28943378	28966523	+	28943378	28946219	3pMXE	0.25	50	50	ENSMUST00000080934.11	ENSMUSG00000028289.13	Epha7	chr4	protein_coding	Eph receptor A7
chr4	28815810	28817445	+	28813480	28817445	A5SS	0.5	50	50	ENSMUST00000080934.11	ENSMUSG00000028289.13	Epha7	chr4	protein_coding	Eph receptor A7
chr4	28938764	28942586	+	28938779	28942586	A5SS	0.5	50	50	ENSMUST00000080934.11	ENSMUSG00000028289.13	Epha7	chr4	protein_coding	Eph receptor A7
chr4	28943378	28947540	+	28943378	28947528	A3SS	0.25	50	50	ENSMUST00000029964.12	ENSMUSG00000028289.13	Epha7	chr4	protein_coding	Eph receptor A7
chr4	28943378	28966523	+	28943378	28947528	A3SS&ES	0.25	50	50	ENSMUST00000029964.12	ENSMUSG00000028289.13	Epha7	chr4	protein_coding	Eph receptor A7
chr4	28943378	28947540	+	28943378	28966523	A3SS	0.25	50	50	ENSMUST00000108194.9	ENSMUSG00000028289.13	Epha7	chr4	protein_coding	Eph receptor A7
chr4	31992516	32002089	+	31992516;31994954	31994874;32002089	ES	0.33	50	50	ENSMUST00000037607.11	ENSMUSG00000028284.14	Map3k7	chr4	protein_coding	mitogen-activated protein kinase kinase kinase 7
chr4	32016000	32019501	+	32016000;32017152	32017037;32019501	ES	0.5	50	50	ENSMUST00000037607.11	ENSMUSG00000028284.14	Map3k7	chr4	protein_coding	mitogen-activated protein kinase kinase kinase 7
chr4	31977389;31977556	31977479;31978431	+	31977389	31978431	cassetteExon	0.5	100	100	ENSMUST00000037607.11	ENSMUSG00000028284.14	Map3k7	chr4	protein_coding	mitogen-activated protein kinase kinase kinase 7
chr4	31981582	31985690	+	31981582	31985686	A3SS	0.5	50	50	ENSMUST00000037607.11	ENSMUSG00000028284.14	Map3k7	chr4	protein_coding	mitogen-activated protein kinase kinase kinase 7
chr4	31988715	31989934	+	31988719	31989934	A5SS	0.5	50	50	ENSMUST00000037607.11	ENSMUSG00000028284.14	Map3k7	chr4	protein_coding	mitogen-activated protein kinase kinase kinase 7
chr4	31995010	32002089	+	31994954	32002089	A5SS	0.33	50	50	ENSMUST00000037607.11	ENSMUSG00000028284.14	Map3k7	chr4	protein_coding	mitogen-activated protein kinase kinase kinase 7
chr4	31992516;31995010	31994874;32002089	+	31992516	32002089	cassetteExon	0.5	100	100	ENSMUST00000080933.13	ENSMUSG00000028284.14	Map3k7	chr4	protein_coding	mitogen-activated protein kinase kinase kinase 7
chr4	32501867	32502332	+	32501867	32561778	A3SS	0.5	50	50	ENSMUST00000108180.9	ENSMUSG00000040270.17	Bach2	chr4	protein_coding	BTB and CNC homology, basic leucine zipper transcription factor 2
chr4	32239132	32317198	+	32239089	32317198	A5SS	0.33	50	50	ENSMUST00000108180.9	ENSMUSG00000040270.17	Bach2	chr4	protein_coding	BTB and CNC homology, basic leucine zipper transcription factor 2
chr4	32248062	32317198	+	32239089	32317198	A5SS	0.33	50	50	ENSMUST00000108180.9	ENSMUSG00000040270.17	Bach2	chr4	protein_coding	BTB and CNC homology, basic leucine zipper transcription factor 2
chr4	32248062	32317198	+	32239132	32317198	A5SS	0.33	50	50	ENSMUST00000149201.8	ENSMUSG00000040270.17	Bach2	chr4	protein_coding	BTB and CNC homology, basic leucine zipper transcription factor 2
chr4	32563509	32565508	-	32563226	32565508	A3SS	0.5	50	50	ENSMUST00000126225.2	ENSMUSG00000086150.2	Bach2os	chr4	lncRNA	BTB and CNC homology 2, opposite strand
chr4	32565747	32571584	-	32565554	32571584	A3SS	0.5	50	50	ENSMUST00000126225.2	ENSMUSG00000086150.2	Bach2os	chr4	lncRNA	BTB and CNC homology 2, opposite strand
chr4	32631166	32631816	+	32631166	32631806	3pMXE	0.5	50	50	ENSMUST00000124278.8	ENSMUSG00000028282.13	Casp8ap2	chr4	protein_coding	caspase 8 associated protein 2
chr4	32615739	32624084	+	32615492	32624084	A5SS	0.5	50	50	ENSMUST00000124278.8	ENSMUSG00000028282.13	Casp8ap2	chr4	protein_coding	caspase 8 associated protein 2
chr4	32634883	32648027	+	32634883	32639364	3pMXE	0.5	50	50	ENSMUST00000127619.2	ENSMUSG00000028282.13	Casp8ap2	chr4	protein_coding	caspase 8 associated protein 2
chr4	32649225	32652674	+	32649257	32652674	A5SS	0.5	50	50	ENSMUST00000178925.8	ENSMUSG00000028282.13	Casp8ap2	chr4	protein_coding	caspase 8 associated protein 2
chr4	32646660	32648027	+	32634883	32648027	A5SS	0.5	50	50	ENSMUST00000108178.2	ENSMUSG00000028282.13	Casp8ap2	chr4	protein_coding	caspase 8 associated protein 2
chr4	32671630	32672897	+	32671630	32672831	A3SS	0.5	50	50	ENSMUST00000071642.11	ENSMUSG00000058006.13	Mdn1	chr4	protein_coding	midasin AAA ATPase 1
chr4	32751068	32751227	+	32751068	32751212	A3SS	0.5	50	50	ENSMUST00000071642.11	ENSMUSG00000058006.13	Mdn1	chr4	protein_coding	midasin AAA ATPase 1
chr4	32760942	32761210	+	32760942	32761204	A3SS	0.5	50	50	ENSMUST00000071642.11	ENSMUSG00000058006.13	Mdn1	chr4	protein_coding	midasin AAA ATPase 1
chr4	32817550	32821257	-	32817550;32818709	32818605;32821257	ES	0.5	50	50	ENSMUST00000035719.11	ENSMUSG00000040183.14	Ankrd6	chr4	protein_coding	ankyrin repeat domain 6
chr4	32818709	32822153	-	32818709;32821334	32821257;32822153	ES	0.5	50	50	ENSMUST00000035719.11	ENSMUSG00000040183.14	Ankrd6	chr4	protein_coding	ankyrin repeat domain 6
chr4	32824494	32828710	-	32824494;32827187	32827089;32828710	ES	0.5	50	50	ENSMUST00000035719.11	ENSMUSG00000040183.14	Ankrd6	chr4	protein_coding	ankyrin repeat domain 6
chr4	32806627	32808684	-	32806642	32808684	A3SS	0.5	50	50	ENSMUST00000035719.11	ENSMUSG00000040183.14	Ankrd6	chr4	protein_coding	ankyrin repeat domain 6
chr4	32824494	32827095	-	32824494	32827089	A5SS	0.33	50	50	ENSMUST00000035719.11	ENSMUSG00000040183.14	Ankrd6	chr4	protein_coding	ankyrin repeat domain 6
chr4	32860588	32923297	-	32860588	32874207	A5SS&ES	0.5	50	50	ENSMUST00000035719.11	ENSMUSG00000040183.14	Ankrd6	chr4	protein_coding	ankyrin repeat domain 6
chr4	32860588	32950747	-	32860588	32923297	5pMXE	0.33	50	50	ENSMUST00000084749.8	ENSMUSG00000040183.14	Ankrd6	chr4	protein_coding	ankyrin repeat domain 6
chr4	32860588	32874207	-	32860588	32950747	A5SS	0.33	50	50	ENSMUST00000084750.8	ENSMUSG00000040183.14	Ankrd6	chr4	protein_coding	ankyrin repeat domain 6
chr4	32817550;32818709	32818605;32822153	-	32817550;32821334	32821257;32822153	MXE	0.5	100	100	ENSMUST00000084748.9	ENSMUSG00000040183.14	Ankrd6	chr4	protein_coding	ankyrin repeat domain 6
chr4	32824494;32827187	32827095;32828710	-	32824494	32828710	cassetteExon	0.5	100	100	ENSMUST00000108166.2	ENSMUSG00000040183.14	Ankrd6	chr4	protein_coding	ankyrin repeat domain 6
chr4	32818709	32822153	-	32821334	32822153	3pMXE	0.5	50	50	ENSMUST00000140837.2	ENSMUSG00000040183.14	Ankrd6	chr4	protein_coding	ankyrin repeat domain 6
chr4	32824494	32828710	-	32827187	32828710	3pMXE	0.5	50	50	ENSMUST00000149650.2	ENSMUSG00000040183.14	Ankrd6	chr4	protein_coding	ankyrin repeat domain 6
chr4	32983607	33004151	+	32983607;32996097	32995802;33004151	ES	0.5	50	50	ENSMUST00000098190.10	ENSMUSG00000028278.15	Rragd	chr4	protein_coding	Ras-related GTP binding D
chr4	32983607;32995196	32995032;32995802	+	32983607	32995802	cassetteExon	0.5	100	100	ENSMUST00000098190.10	ENSMUSG00000028278.15	Rragd	chr4	protein_coding	Ras-related GTP binding D
chr4	33005248	33007135	+	33005248	33007070	A3SS	0.5	50	50	ENSMUST00000098190.10	ENSMUSG00000028278.15	Rragd	chr4	protein_coding	Ras-related GTP binding D
chr4	32983607	32995032	+	32983607	33004151	A3SS	0.33	50	50	ENSMUST00000084747.6	ENSMUSG00000028278.15	Rragd	chr4	protein_coding	Ras-related GTP binding D
chr4	33031616	33038199	+	33031616;33036782	33036709;33038199	ES	0.5	50	50	ENSMUST00000124992.8	ENSMUSG00000028277.14	Ube2j1	chr4	protein_coding	ubiquitin-conjugating enzyme E2J 1
chr4	33043986	33049682	+	33043986;33045199	33045080;33049682	ES	0.5	50	50	ENSMUST00000124992.8	ENSMUSG00000028277.14	Ube2j1	chr4	protein_coding	ubiquitin-conjugating enzyme E2J 1
chr4	33043986	33049682	+	33043986	33045080	3pMXE	0.5	50	50	ENSMUST00000029944.13	ENSMUSG00000028277.14	Ube2j1	chr4	protein_coding	ubiquitin-conjugating enzyme E2J 1
chr4	33031616	33038199	+	33036782	33038199	5pMXE	0.5	50	50	ENSMUST00000135924.2	ENSMUSG00000028277.14	Ube2j1	chr4	protein_coding	ubiquitin-conjugating enzyme E2J 1
chr4	33078889	33081329	+	33077522	33081329	A5SS	0.5	50	50	ENSMUST00000108162.8	ENSMUSG00000023267.11	Gabrr2	chr4	protein_coding	gamma-aminobutyric acid (GABA) C receptor, subunit rho 2
chr4	33209370	33223568	+	33209370	33226028	A3SS	0.5	50	50	ENSMUST00000067864.8	ENSMUSG00000054679.9	Srsf12	chr4	protein_coding	serine and arginine-rich splicing factor 12
chr4	33225868	33226028	+	33209370	33226028	A5SS	0.5	50	50	ENSMUST00000067864.8	ENSMUSG00000054679.9	Srsf12	chr4	protein_coding	serine and arginine-rich splicing factor 12
chr4	33246507	33289995	-	33246507	33247948	5pMXE	0.33	50	50	ENSMUST00000049357.10	ENSMUSG00000040128.10	Pnrc1	chr4	protein_coding	proline-rich nuclear receptor coactivator 1
chr4	33246507	33247298	-	33246507	33247948	A5SS	0.33	50	50	ENSMUST00000049357.10	ENSMUSG00000040128.10	Pnrc1	chr4	protein_coding	proline-rich nuclear receptor coactivator 1
chr4	33246507	33289995	-	33246507	33247298	5pMXE	0.33	50	50	ENSMUST00000155616.2	ENSMUSG00000040128.10	Pnrc1	chr4	protein_coding	proline-rich nuclear receptor coactivator 1
chr4	33356196	33357780	+	33356196	33362880	A3SS	0.5	50	50	ENSMUST00000108153.9	ENSMUSG00000028274.18	Rngtt	chr4	protein_coding	RNA guanylyltransferase and 5'-phosphatase
chr4	33499074	33500299	+	33499074	33500238	A3SS	0.5	50	50	ENSMUST00000108153.9	ENSMUSG00000028274.18	Rngtt	chr4	protein_coding	RNA guanylyltransferase and 5'-phosphatase
chr4	33323838	33324874	+	33320628	33324874	A5SS	0.5	50	50	ENSMUST00000108153.9	ENSMUSG00000028274.18	Rngtt	chr4	protein_coding	RNA guanylyltransferase and 5'-phosphatase
chr4	33926694	33943552	+	33926694	33935212	3pMXE	0.5	50	50	ENSMUST00000133462.2	ENSMUSG00000044288.7	Cnr1	chr4	protein_coding	cannabinoid receptor 1 (brain)
chr4	33925158;33926694	33926609;33943552	+	33925158	33943552	cassetteExon	0.5	100	100	ENSMUST00000057188.7	ENSMUSG00000044288.7	Cnr1	chr4	protein_coding	cannabinoid receptor 1 (brain)
chr4	33925158	33943552	+	33926694	33943552	5pMXE	0.5	50	50	ENSMUST00000084736.3	ENSMUSG00000044288.7	Cnr1	chr4	protein_coding	cannabinoid receptor 1 (brain)
chr4	34598756;34599140	34598983;34599704	-	34598756	34599704	cassetteExon	0.5	100	100	ENSMUST00000108142.8	ENSMUSG00000040044.12	Orc3	chr4	protein_coding	origin recognition complex, subunit 3
chr4	34578032	34579743	-	34578029	34579743	A3SS	0.5	50	50	ENSMUST00000108142.8	ENSMUSG00000040044.12	Orc3	chr4	protein_coding	origin recognition complex, subunit 3
chr4	34592499	34593061	-	34587082	34593061	A3SS	0.5	50	50	ENSMUST00000108142.8	ENSMUSG00000040044.12	Orc3	chr4	protein_coding	origin recognition complex, subunit 3
chr4	34611076	34614865	-	34605681	34614865	A3SS	0.5	50	50	ENSMUST00000140334.2	ENSMUSG00000040044.12	Orc3	chr4	protein_coding	origin recognition complex, subunit 3
chr4	34605681	34607131	-	34605681	34614865	A5SS	0.5	50	50	ENSMUST00000140334.2	ENSMUSG00000040044.12	Orc3	chr4	protein_coding	origin recognition complex, subunit 3
chr4	34598756	34599704	-	34599140	34599704	3pMXE	0.5	50	50	ENSMUST00000125218.8	ENSMUSG00000040044.12	Orc3	chr4	protein_coding	origin recognition complex, subunit 3
chr4	34623513	34630473	+	34623513;34625484	34625401;34630473	ES	0.5	50	50	ENSMUST00000029968.14	ENSMUSG00000028292.15	Rars2	chr4	protein_coding	arginyl-tRNA synthetase 2, mitochondrial
chr4	34615026;34615561	34615469;34618554	+	34615026	34618554	cassetteExon	0.5	100	100	ENSMUST00000029968.14	ENSMUSG00000028292.15	Rars2	chr4	protein_coding	arginyl-tRNA synthetase 2, mitochondrial
chr4	34625484	34630477	+	34625484	34630473	A3SS	0.5	50	50	ENSMUST00000029968.14	ENSMUSG00000028292.15	Rars2	chr4	protein_coding	arginyl-tRNA synthetase 2, mitochondrial
chr4	34623513	34630473	+	34623513	34625401	3pMXE	0.5	50	50	ENSMUST00000136563.8	ENSMUSG00000028292.15	Rars2	chr4	protein_coding	arginyl-tRNA synthetase 2, mitochondrial
chr4	34615026	34618554	+	34615561	34618554	A5SS	0.5	50	50	ENSMUST00000155133.2	ENSMUSG00000028292.15	Rars2	chr4	protein_coding	arginyl-tRNA synthetase 2, mitochondrial
chr4	34669663	34675030	-	34669663;34671846	34671780;34675030	ES	0.33	50	50	ENSMUST00000029970.14	ENSMUSG00000028293.15	Slc35a1	chr4	protein_coding	solute carrier family 35 (CMP-sialic acid transporter), member 1
chr4	34671846;34673928	34673809;34675030	-	34671846	34675030	cassetteExon	0.5	100	100	ENSMUST00000029970.14	ENSMUSG00000028293.15	Slc35a1	chr4	protein_coding	solute carrier family 35 (CMP-sialic acid transporter), member 1
chr4	34683462;34684131	34684049;34687244	-	34683462	34687244	cassetteExon	0.5	100	100	ENSMUST00000029970.14	ENSMUSG00000028293.15	Slc35a1	chr4	protein_coding	solute carrier family 35 (CMP-sialic acid transporter), member 1
chr4	34673928	34675030	-	34669663	34675030	A3SS	0.33	50	50	ENSMUST00000151549.8	ENSMUSG00000028293.15	Slc35a1	chr4	protein_coding	solute carrier family 35 (CMP-sialic acid transporter), member 1
chr4	34714535	34719045	-	34714535;34716503	34716305;34719045	ES	0.5	50	50	ENSMUST00000029971.12	ENSMUSG00000028294.16	Cfap206	chr4	protein_coding	cilia and flagella associated protein 206
chr4	34723696	34724815	-	34722796	34724815	A3SS	0.5	50	50	ENSMUST00000029971.12	ENSMUSG00000028294.16	Cfap206	chr4	protein_coding	cilia and flagella associated protein 206
chr4	34728908	34730064	-	34728908	34730060	A5SS	0.33	50	50	ENSMUST00000029971.12	ENSMUSG00000028294.16	Cfap206	chr4	protein_coding	cilia and flagella associated protein 206
chr4	34728908	34730067	-	34728908	34730060	A5SS	0.33	50	50	ENSMUST00000029971.12	ENSMUSG00000028294.16	Cfap206	chr4	protein_coding	cilia and flagella associated protein 206
chr4	34727988	34728796	-	34722796	34728796	A3SS	0.5	50	50	ENSMUST00000162495.8	ENSMUSG00000028294.16	Cfap206	chr4	protein_coding	cilia and flagella associated protein 206
chr4	34722796	34724815	-	34722796	34728796	A5SS	0.5	50	50	ENSMUST00000162495.8	ENSMUSG00000028294.16	Cfap206	chr4	protein_coding	cilia and flagella associated protein 206
chr4	34728908	34730064	-	34728908	34730067	A5SS	0.33	50	50	ENSMUST00000137514.3	ENSMUSG00000028294.16	Cfap206	chr4	protein_coding	cilia and flagella associated protein 206
chr4	34771414	34778224	-	34771414;34772053	34771878;34778224	ES	0.5	50	50	ENSMUST00000108132.8	ENSMUSG00000028295.15	Smim8	chr4	protein_coding	small integral membrane protein 8
chr4	34772053	34778279	-	34772053	34778224	5pMXE	0.5	50	50	ENSMUST00000108132.8	ENSMUSG00000028295.15	Smim8	chr4	protein_coding	small integral membrane protein 8
chr4	34771414	34771874	-	34771414	34771878	A5SS	0.25	50	50	ENSMUST00000108132.8	ENSMUSG00000028295.15	Smim8	chr4	protein_coding	small integral membrane protein 8
chr4	34771414	34778100	-	34771414	34771878	A5SS&ES	0.25	50	50	ENSMUST00000108132.8	ENSMUSG00000028295.15	Smim8	chr4	protein_coding	small integral membrane protein 8
chr4	34771414	34778224	-	34771414;34772053	34771874;34778224	ES	0.5	50	50	ENSMUST00000108133.10	ENSMUSG00000028295.15	Smim8	chr4	protein_coding	small integral membrane protein 8
chr4	34769147	34778279	-	34769147	34771258	A5SS&ES	0.5	50	50	ENSMUST00000108133.10	ENSMUSG00000028295.15	Smim8	chr4	protein_coding	small integral membrane protein 8
chr4	34771414	34778100	-	34771414	34771874	A5SS&ES	0.2	50	50	ENSMUST00000108133.10	ENSMUSG00000028295.15	Smim8	chr4	protein_coding	small integral membrane protein 8
chr4	34771414	34778279	-	34771414	34771874	A5SS&ES	0.2	50	50	ENSMUST00000108133.10	ENSMUSG00000028295.15	Smim8	chr4	protein_coding	small integral membrane protein 8
chr4	34771414	34778279	-	34771414;34772053	34771874;34778279	ES	0.33	50	50	ENSMUST00000108131.8	ENSMUSG00000028295.15	Smim8	chr4	protein_coding	small integral membrane protein 8
chr4	34771414	34778224	-	34771414	34771874	A5SS&ES	0.2	50	50	ENSMUST00000108131.8	ENSMUSG00000028295.15	Smim8	chr4	protein_coding	small integral membrane protein 8
chr4	34771414	34778100	-	34771414	34778224	A5SS	0.2	50	50	ENSMUST00000108134.8	ENSMUSG00000028295.15	Smim8	chr4	protein_coding	small integral membrane protein 8
chr4	34771414	34778279	-	34771414	34778224	A5SS	0.2	50	50	ENSMUST00000108134.8	ENSMUSG00000028295.15	Smim8	chr4	protein_coding	small integral membrane protein 8
chr4	34769147	34778279	-	34769147;34771414	34771258;34778279	ES	0.33	50	50	ENSMUST00000029972.4	ENSMUSG00000028295.15	Smim8	chr4	protein_coding	small integral membrane protein 8
chr4	34771414;34772053	34771878;34778279	-	34771414	34778279	cassetteExon	0.5	100	100	ENSMUST00000029972.4	ENSMUSG00000028295.15	Smim8	chr4	protein_coding	small integral membrane protein 8
chr4	34771414	34778100	-	34771414	34778279	A5SS	0.2	50	50	ENSMUST00000029972.4	ENSMUSG00000028295.15	Smim8	chr4	protein_coding	small integral membrane protein 8
chr4	34772053	34778279	-	34769147	34778279	A3SS	0.33	50	50	ENSMUST00000139922.2	ENSMUSG00000028295.15	Smim8	chr4	protein_coding	small integral membrane protein 8
chr4	34771414	34778224	-	34771414	34771878	A5SS&ES	0.2	50	50	ENSMUST00000147396.2	ENSMUSG00000028295.15	Smim8	chr4	protein_coding	small integral membrane protein 8
chr4	34826895	34839332	-	34826880	34839332	A3SS	0.5	50	50	ENSMUST00000098163.9	ENSMUSG00000039967.15	Zfp292	chr4	protein_coding	zinc finger protein 292
chr4	34893861;34895493	34895371;34903993	+	34893861	34903993	cassetteExon	0.5	100	100	ENSMUST00000029975.10	ENSMUSG00000028298.11	Cga	chr4	protein_coding	glycoprotein hormones, alpha subunit
chr4	34893861;34895637	34895371;34903993	+	34893861	34903993	cassetteExon	0.5	100	100	ENSMUST00000029975.10	ENSMUSG00000028298.11	Cga	chr4	protein_coding	glycoprotein hormones, alpha subunit
chr4	34895493	34903993	+	34895637	34903993	A5SS	0.33	50	50	ENSMUST00000135871.8	ENSMUSG00000028298.11	Cga	chr4	protein_coding	glycoprotein hormones, alpha subunit
chr4	34910608	34910851	-	34907548	34910851	A3SS	0.5	50	50	ENSMUST00000149572.8	ENSMUSG00000085824.8	Platr9	chr4	lncRNA	pluripotency associated transcript 9
chr4	35218916;35222088	35221881;35225929	-	35218916	35225929	cassetteExon	0.5	100	100	ENSMUST00000084724.10	ENSMUSG00000028300.15	C9orf72	chr4	protein_coding	C9orf72, member of C9orf72-SMCR8 complex
chr4	35217272	35225788	-	35217272	35218414	A5SS&ES	0.5	50	50	ENSMUST00000084724.10	ENSMUSG00000028300.15	C9orf72	chr4	protein_coding	C9orf72, member of C9orf72-SMCR8 complex
chr4	35218916	35225788	-	35218916	35225929	A5SS	0.25	50	50	ENSMUST00000084724.10	ENSMUSG00000028300.15	C9orf72	chr4	protein_coding	C9orf72, member of C9orf72-SMCR8 complex
chr4	35218916	35226116	-	35218916	35225929	A5SS	0.25	50	50	ENSMUST00000084724.10	ENSMUSG00000028300.15	C9orf72	chr4	protein_coding	C9orf72, member of C9orf72-SMCR8 complex
chr4	35218916	35225788	-	35217272	35225788	A3SS	0.5	50	50	ENSMUST00000108126.8	ENSMUSG00000028300.15	C9orf72	chr4	protein_coding	C9orf72, member of C9orf72-SMCR8 complex
chr4	35217272	35225788	-	35217272;35218916	35218414;35225788	ES	0.5	50	50	ENSMUST00000108127.4	ENSMUSG00000028300.15	C9orf72	chr4	protein_coding	C9orf72, member of C9orf72-SMCR8 complex
chr4	35218916	35226116	-	35218916	35225788	5pMXE	0.25	50	50	ENSMUST00000108127.4	ENSMUSG00000028300.15	C9orf72	chr4	protein_coding	C9orf72, member of C9orf72-SMCR8 complex
chr4	35218916	35221881	-	35218916	35225788	A5SS	0.25	50	50	ENSMUST00000108127.4	ENSMUSG00000028300.15	C9orf72	chr4	protein_coding	C9orf72, member of C9orf72-SMCR8 complex
chr4	35218916	35221881	-	35218916	35226116	A5SS	0.25	50	50	ENSMUST00000156472.2	ENSMUSG00000028300.15	C9orf72	chr4	protein_coding	C9orf72, member of C9orf72-SMCR8 complex
chr4	35226186	35260373	+	35226186	35235670	3pMXE	0.33	50	50	ENSMUST00000127015.2	ENSMUSG00000084828.2	Gm12367	chr4	lncRNA	predicted gene 12367
chr4	35226186	35228538	+	35226186	35235670	A3SS	0.33	50	50	ENSMUST00000127015.2	ENSMUSG00000084828.2	Gm12367	chr4	lncRNA	predicted gene 12367
chr4	35226186	35228538	+	35226186	35260373	A3SS	0.33	50	50	ENSMUST00000146909.2	ENSMUSG00000084828.2	Gm12367	chr4	lncRNA	predicted gene 12367
chr4	35710013	35890026	-	35710013	35845010	5pMXE	0.25	50	50	ENSMUST00000164772.8	ENSMUSG00000045083.15	Lingo2	chr4	protein_coding	leucine rich repeat and Ig domain containing 2
chr4	35710013	36056642	-	35710013	35845010	5pMXE	0.25	50	50	ENSMUST00000164772.8	ENSMUSG00000045083.15	Lingo2	chr4	protein_coding	leucine rich repeat and Ig domain containing 2
chr4	35710013;35765156	35765050;35845010	-	35710013	35845010	cassetteExon	0.5	100	100	ENSMUST00000164772.8	ENSMUSG00000045083.15	Lingo2	chr4	protein_coding	leucine rich repeat and Ig domain containing 2
chr4	35710013;35890183	35890026;36056642	-	35710013	36056642	cassetteExon	0.5	100	100	ENSMUST00000098151.9	ENSMUSG00000045083.15	Lingo2	chr4	protein_coding	leucine rich repeat and Ig domain containing 2
chr4	36056804;36122180	36122141;36136454	-	36056804	36136454	cassetteExon	0.5	100	100	ENSMUST00000098151.9	ENSMUSG00000045083.15	Lingo2	chr4	protein_coding	leucine rich repeat and Ig domain containing 2
chr4	35710013	35765050	-	35710013	36056642	A5SS	0.25	50	50	ENSMUST00000098151.9	ENSMUSG00000045083.15	Lingo2	chr4	protein_coding	leucine rich repeat and Ig domain containing 2
chr4	35710013	35765050	-	35710013	35890026	A5SS	0.25	50	50	ENSMUST00000108122.8	ENSMUSG00000045083.15	Lingo2	chr4	protein_coding	leucine rich repeat and Ig domain containing 2
chr4	36718963	36739067	-	36718963	36951081	A5SS	0.33	50	50	ENSMUST00000108122.8	ENSMUSG00000045083.15	Lingo2	chr4	protein_coding	leucine rich repeat and Ig domain containing 2
chr4	36718963	36950258	-	36718963	36951081	A5SS	0.33	50	50	ENSMUST00000108122.8	ENSMUSG00000045083.15	Lingo2	chr4	protein_coding	leucine rich repeat and Ig domain containing 2
chr4	36718963;36739097	36739067;36950258	-	36718963	36950258	cassetteExon	0.5	100	100	ENSMUST00000124999.2	ENSMUSG00000045083.15	Lingo2	chr4	protein_coding	leucine rich repeat and Ig domain containing 2
chr4	40167191	40168423	+	40167191	40175665	A3SS	0.5	50	50	ENSMUST00000102973.4	ENSMUSG00000028405.10	Aco1	chr4	protein_coding	aconitase 1
chr4	40206106	40208451	-	40204065	40208451	A3SS	0.5	50	50	ENSMUST00000136435.2	ENSMUSG00000040296.16	Ddx58	chr4	protein_coding	DEAD/H box helicase 58
chr4	40229676	40239591	-	40229676;40235382	40235248;40239591	ES	0.5	50	50	ENSMUST00000037907.13	ENSMUSG00000040296.16	Ddx58	chr4	protein_coding	DEAD/H box helicase 58
chr4	40228200	40229495	-	40228113	40229495	A3SS	0.5	50	50	ENSMUST00000037907.13	ENSMUSG00000040296.16	Ddx58	chr4	protein_coding	DEAD/H box helicase 58
chr4	40269889	40270038	+	40269719	40270038	A5SS	0.5	50	50	ENSMUST00000129758.3	ENSMUSG00000028407.5	Smim27	chr4	protein_coding	small integral membrane protein 27
chr4	40272854	40279158	-	40272854;40277745	40277653;40279158	ES	0.5	50	50	ENSMUST00000095128.10	ENSMUSG00000071014.11	Ndufb6	chr4	protein_coding	NADH:ubiquinone oxidoreductase subunit B6
chr4	40473612	40473861	+	40473604	40473861	A5SS	0.5	50	50	ENSMUST00000049655.3	ENSMUSG00000046593.4	Tmem215	chr4	protein_coding	transmembrane protein 215
chr4	40693449	40695377	-	40693449;40695136	40694852;40695377	ES	0.5	50	50	ENSMUST00000068125.11	ENSMUSG00000028411.16	Aptx	chr4	protein_coding	aprataxin
chr4	40697353	40703137	-	40697353	40702724	5pMXE	0.33	50	50	ENSMUST00000068125.11	ENSMUSG00000028411.16	Aptx	chr4	protein_coding	aprataxin
chr4	40695418	40697217	-	40695423	40697217	A3SS	0.5	50	50	ENSMUST00000068125.11	ENSMUSG00000028411.16	Aptx	chr4	protein_coding	aprataxin
chr4	40693449	40694406	-	40693449	40694852	A5SS	0.33	50	50	ENSMUST00000068125.11	ENSMUSG00000028411.16	Aptx	chr4	protein_coding	aprataxin
chr4	40697353	40702374	-	40697353	40702724	A5SS	0.33	50	50	ENSMUST00000068125.11	ENSMUSG00000028411.16	Aptx	chr4	protein_coding	aprataxin
chr4	40697353	40702374	-	40697353	40703137	A5SS	0.33	50	50	ENSMUST00000030119.10	ENSMUSG00000028411.16	Aptx	chr4	protein_coding	aprataxin
chr4	40693449	40694406	-	40693449	40695377	A5SS	0.33	50	50	ENSMUST00000108103.9	ENSMUSG00000028411.16	Aptx	chr4	protein_coding	aprataxin
chr4	40693449	40695377	-	40695136	40695377	3pMXE	0.5	50	50	ENSMUST00000155710.2	ENSMUSG00000028411.16	Aptx	chr4	protein_coding	aprataxin
chr4	40722633	40723703	+	40722435	40723703	A5SS	0.2	50	50	ENSMUST00000139406.2	ENSMUSG00000028410.14	Dnaja1	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member A1
chr4	40723001	40723703	+	40722435	40723703	A5SS	0.2	50	50	ENSMUST00000139406.2	ENSMUSG00000028410.14	Dnaja1	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member A1
chr4	40723136	40723703	+	40722435	40723703	A5SS	0.2	50	50	ENSMUST00000139406.2	ENSMUSG00000028410.14	Dnaja1	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member A1
chr4	40723253	40723703	+	40722435	40723703	A5SS	0.2	50	50	ENSMUST00000139406.2	ENSMUSG00000028410.14	Dnaja1	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member A1
chr4	40723844	40726105	+	40723844;40724150	40723973;40726105	ES	0.5	50	50	ENSMUST00000030118.10	ENSMUSG00000028410.14	Dnaja1	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member A1
chr4	40723001	40723703	+	40722633	40723703	A5SS	0.2	50	50	ENSMUST00000030118.10	ENSMUSG00000028410.14	Dnaja1	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member A1
chr4	40723136	40723703	+	40722633	40723703	A5SS	0.2	50	50	ENSMUST00000030118.10	ENSMUSG00000028410.14	Dnaja1	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member A1
chr4	40723253	40723703	+	40722633	40723703	A5SS	0.2	50	50	ENSMUST00000030118.10	ENSMUSG00000028410.14	Dnaja1	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member A1
chr4	40723001	40723703	+	40723136	40723703	A5SS	0.2	50	50	ENSMUST00000129204.8	ENSMUSG00000028410.14	Dnaja1	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member A1
chr4	40723253	40723703	+	40723136	40723703	A5SS	0.2	50	50	ENSMUST00000129204.8	ENSMUSG00000028410.14	Dnaja1	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member A1
chr4	40723253	40723703	+	40723001	40723703	A5SS	0.2	50	50	ENSMUST00000137246.8	ENSMUSG00000028410.14	Dnaja1	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member A1
chr4	40723844	40726105	+	40723844	40723973	3pMXE	0.5	50	50	ENSMUST00000126020.2	ENSMUSG00000028410.14	Dnaja1	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member A1
chr4	40723844	40726105	+	40724150	40726105	5pMXE	0.5	50	50	ENSMUST00000148976.2	ENSMUSG00000028410.14	Dnaja1	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member A1
chr4	40755837	40757277	-	40755837	40757777	A5SS	0.5	50	50	ENSMUST00000030117.5	ENSMUSG00000028409.12	Smu1	chr4	protein_coding	smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)
chr4	40809404	40809679	-	40807837	40809679	A3SS	0.5	50	50	ENSMUST00000030121.13	ENSMUSG00000028413.14	B4galt1	chr4	protein_coding	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1
chr4	41009269	41015203	+	41009269	41011527	3pMXE	0.33	50	50	ENSMUST00000091614.7	ENSMUSG00000028423.16	Nfx1	chr4	protein_coding	nuclear transcription factor, X-box binding 1
chr4	41009269	41012058	+	41009269	41011527	A3SS	0.33	50	50	ENSMUST00000091614.7	ENSMUSG00000028423.16	Nfx1	chr4	protein_coding	nuclear transcription factor, X-box binding 1
chr4	41009269	41015203	+	41009269	41012058	3pMXE	0.33	50	50	ENSMUST00000030133.15	ENSMUSG00000028423.16	Nfx1	chr4	protein_coding	nuclear transcription factor, X-box binding 1
chr4	41021429	41021749	+	41018489	41021749	A5SS	0.5	50	50	ENSMUST00000098143.11	ENSMUSG00000028423.16	Nfx1	chr4	protein_coding	nuclear transcription factor, X-box binding 1
chr4	41036137	41036248	-	41036137	41045280	A5SS	0.33	50	50	ENSMUST00000054945.8	ENSMUSG00000028427.14	Aqp7	chr4	protein_coding	aquaporin 7
chr4	41036137	41040763	-	41036137	41045280	A5SS	0.33	50	50	ENSMUST00000054945.8	ENSMUSG00000028427.14	Aqp7	chr4	protein_coding	aquaporin 7
chr4	41036137	41036248	-	41036137	41040763	A5SS	0.33	50	50	ENSMUST00000144201.8	ENSMUSG00000028427.14	Aqp7	chr4	protein_coding	aquaporin 7
chr4	41121500	41121779	-	41121586	41121779	A3SS	0.5	50	50	ENSMUST00000030138.9	ENSMUSG00000028430.15	Nol6	chr4	protein_coding	nucleolar protein family 6 (RNA-associated)
chr4	41235594	41275040	-	41235594;41251671	41251535;41275040	ES	0.33	50	50	ENSMUST00000108068.8	ENSMUSG00000028433.15	Ubap2	chr4	protein_coding	ubiquitin-associated protein 2
chr4	41235594;41245492	41245456;41251535	-	41235594	41251535	cassetteExon	0.5	100	100	ENSMUST00000108068.8	ENSMUSG00000028433.15	Ubap2	chr4	protein_coding	ubiquitin-associated protein 2
chr4	41274109	41275040	-	41251671	41275040	A3SS	0.33	50	50	ENSMUST00000108068.8	ENSMUSG00000028433.15	Ubap2	chr4	protein_coding	ubiquitin-associated protein 2
chr4	41211894	41213750	-	41211894	41216566	A5SS	0.5	50	50	ENSMUST00000108068.8	ENSMUSG00000028433.15	Ubap2	chr4	protein_coding	ubiquitin-associated protein 2
chr4	41274109	41275040	-	41235594	41275040	A3SS	0.33	50	50	ENSMUST00000132499.2	ENSMUSG00000028433.15	Ubap2	chr4	protein_coding	ubiquitin-associated protein 2
chr4	41235594	41245456	-	41235594	41275040	A5SS	0.33	50	50	ENSMUST00000132499.2	ENSMUSG00000028433.15	Ubap2	chr4	protein_coding	ubiquitin-associated protein 2
chr4	41366930;41371323	41371197;41371725	+	41366930	41371725	cassetteExon	0.5	100	100	ENSMUST00000108060.10	ENSMUSG00000028437.15	Ubap1	chr4	protein_coding	ubiquitin-associated protein 1
chr4	41371849;41387357	41387175;41388096	+	41371849;41379870	41378947;41388096	MXE	0.5	100	100	ENSMUST00000108060.10	ENSMUSG00000028437.15	Ubap1	chr4	protein_coding	ubiquitin-associated protein 1
chr4	41379870;41387357	41387175;41388096	+	41379870	41388096	cassetteExon	0.5	100	100	ENSMUST00000108060.10	ENSMUSG00000028437.15	Ubap1	chr4	protein_coding	ubiquitin-associated protein 1
chr4	41371849	41387175	+	41371849;41379870	41378947;41387175	ES	0.5	50	50	ENSMUST00000072866.12	ENSMUSG00000028437.15	Ubap1	chr4	protein_coding	ubiquitin-associated protein 1
chr4	41366930	41371725	+	41366930	41371197	3pMXE	0.5	50	50	ENSMUST00000136705.2	ENSMUSG00000028437.15	Ubap1	chr4	protein_coding	ubiquitin-associated protein 1
chr4	41366930	41371725	+	41371323	41371725	5pMXE	0.5	50	50	ENSMUST00000154529.2	ENSMUSG00000028437.15	Ubap1	chr4	protein_coding	ubiquitin-associated protein 1
chr4	41371849	41387175	+	41371849	41378947	3pMXE	0.5	50	50	ENSMUST00000154529.2	ENSMUSG00000028437.15	Ubap1	chr4	protein_coding	ubiquitin-associated protein 1
chr4	41379870	41387175	+	41371849	41387175	A5SS	0.5	50	50	ENSMUST00000132235.2	ENSMUSG00000028437.15	Ubap1	chr4	protein_coding	ubiquitin-associated protein 1
chr4	41379870	41388096	+	41387357	41388096	A5SS&ES	0.5	50	50	ENSMUST00000132235.2	ENSMUSG00000028437.15	Ubap1	chr4	protein_coding	ubiquitin-associated protein 1
chr4	41428982;41429411	41429267;41464710	-	41428982	41464710	cassetteExon	0.5	100	100	ENSMUST00000108055.9	ENSMUSG00000028438.17	Kif24	chr4	protein_coding	kinesin family member 24
chr4	41455362	41464710	-	41428982	41464710	A3SS	0.25	50	50	ENSMUST00000108055.9	ENSMUSG00000028438.17	Kif24	chr4	protein_coding	kinesin family member 24
chr4	41462437	41464710	-	41428982	41464710	A3SS	0.25	50	50	ENSMUST00000108055.9	ENSMUSG00000028438.17	Kif24	chr4	protein_coding	kinesin family member 24
chr4	41414999	41423452	-	41404798	41423452	A3SS	0.5	50	50	ENSMUST00000030148.6	ENSMUSG00000028438.17	Kif24	chr4	protein_coding	kinesin family member 24
chr4	41404798	41409732	-	41404798	41423452	A5SS	0.5	50	50	ENSMUST00000030148.6	ENSMUSG00000028438.17	Kif24	chr4	protein_coding	kinesin family member 24
chr4	41400508	41403790	-	41395663	41403790	A3SS	0.5	50	50	ENSMUST00000141951.2	ENSMUSG00000028438.17	Kif24	chr4	protein_coding	kinesin family member 24
chr4	41395663	41397547	-	41395663	41403790	A5SS	0.5	50	50	ENSMUST00000141951.2	ENSMUSG00000028438.17	Kif24	chr4	protein_coding	kinesin family member 24
chr4	41429411	41464710	-	41429411;41462437	41462375;41464710	ES	0.25	50	50	ENSMUST00000154175.8	ENSMUSG00000028438.17	Kif24	chr4	protein_coding	kinesin family member 24
chr4	41455362	41464710	-	41462437	41464710	A3SS&ES	0.25	50	50	ENSMUST00000154175.8	ENSMUSG00000028438.17	Kif24	chr4	protein_coding	kinesin family member 24
chr4	41461672	41462375	-	41429411	41462375	A3SS	0.5	50	50	ENSMUST00000154175.8	ENSMUSG00000028438.17	Kif24	chr4	protein_coding	kinesin family member 24
chr4	41455362	41464710	-	41429411	41464710	A3SS	0.25	50	50	ENSMUST00000154535.8	ENSMUSG00000028438.17	Kif24	chr4	protein_coding	kinesin family member 24
chr4	41499690	41502141	-	41499690	41502991	A5SS	0.5	50	50	ENSMUST00000054920.5	ENSMUSG00000046312.5	Myorg	chr4	protein_coding	myogenesis regulating glycosidase (putative)
chr4	41505654	41507521	-	41505654;41507269	41507099;41507521	ES	0.33	50	50	ENSMUST00000123356.8	ENSMUSG00000028441.13	1110017D15Rik	chr4	protein_coding	RIKEN cDNA 1110017D15 gene
chr4	41507328	41507521	-	41507269	41507521	A3SS	0.33	50	50	ENSMUST00000123356.8	ENSMUSG00000028441.13	1110017D15Rik	chr4	protein_coding	RIKEN cDNA 1110017D15 gene
chr4	41505654	41507094	-	41505654	41507099	A5SS	0.33	50	50	ENSMUST00000123356.8	ENSMUSG00000028441.13	1110017D15Rik	chr4	protein_coding	RIKEN cDNA 1110017D15 gene
chr4	41505654;41507269	41507094;41507521	-	41505654	41507521	cassetteExon	0.5	100	100	ENSMUST00000123865.8	ENSMUSG00000028441.13	1110017D15Rik	chr4	protein_coding	RIKEN cDNA 1110017D15 gene
chr4	41505654;41507328	41507094;41507521	-	41505654	41507521	cassetteExon	0.5	100	100	ENSMUST00000123865.8	ENSMUSG00000028441.13	1110017D15Rik	chr4	protein_coding	RIKEN cDNA 1110017D15 gene
chr4	41505654;41507328	41507099;41507521	-	41505654	41507521	cassetteExon	0.5	100	100	ENSMUST00000123865.8	ENSMUSG00000028441.13	1110017D15Rik	chr4	protein_coding	RIKEN cDNA 1110017D15 gene
chr4	41508629	41508834	-	41508629	41511432	A5SS	0.5	50	50	ENSMUST00000125303.8	ENSMUSG00000028441.13	1110017D15Rik	chr4	protein_coding	RIKEN cDNA 1110017D15 gene
chr4	41505654	41507521	-	41507269	41507521	3pMXE	0.33	50	50	ENSMUST00000134546.2	ENSMUSG00000028441.13	1110017D15Rik	chr4	protein_coding	RIKEN cDNA 1110017D15 gene
chr4	41520395	41520912	-	41520398	41520912	A3SS	0.5	50	50	ENSMUST00000108049.9	ENSMUSG00000028439.15	Fam219a	chr4	protein_coding	family with sequence similarity 219, member A
chr4	41524414	41524655	-	41524414	41569210	A5SS	0.33	50	50	ENSMUST00000108049.9	ENSMUSG00000028439.15	Fam219a	chr4	protein_coding	family with sequence similarity 219, member A
chr4	41524414	41569177	-	41524414	41569210	A5SS	0.33	50	50	ENSMUST00000108049.9	ENSMUSG00000028439.15	Fam219a	chr4	protein_coding	family with sequence similarity 219, member A
chr4	41524414	41524655	-	41524414	41569177	A5SS	0.33	50	50	ENSMUST00000108052.10	ENSMUSG00000028439.15	Fam219a	chr4	protein_coding	family with sequence similarity 219, member A
chr4	41631787	41632140	+	41630676	41632140	A5SS	0.5	50	50	ENSMUST00000102963.10	ENSMUSG00000061322.16	Dnai1	chr4	protein_coding	dynein axonemal intermediate chain 1
chr4	41633375	41634962	+	41632488	41634962	A5SS	0.5	50	50	ENSMUST00000102963.10	ENSMUSG00000061322.16	Dnai1	chr4	protein_coding	dynein axonemal intermediate chain 1
chr4	41686886	41695796	-	41686886	41695311	5pMXE	0.33	50	50	ENSMUST00000102961.10	ENSMUSG00000028444.18	Cntfr	chr4	protein_coding	ciliary neurotrophic factor receptor
chr4	41686886	41696978	-	41686886	41695311	5pMXE	0.33	50	50	ENSMUST00000102961.10	ENSMUSG00000028444.18	Cntfr	chr4	protein_coding	ciliary neurotrophic factor receptor
chr4	41669828	41670843	-	41663657	41670843	A3SS	0.5	50	50	ENSMUST00000102961.10	ENSMUSG00000028444.18	Cntfr	chr4	protein_coding	ciliary neurotrophic factor receptor
chr4	41686886	41695796	-	41686886	41696978	A5SS	0.33	50	50	ENSMUST00000102962.10	ENSMUSG00000028444.18	Cntfr	chr4	protein_coding	ciliary neurotrophic factor receptor
chr4	41760513	41763582	+	41702894	41763582	A5SS	0.2	50	50	ENSMUST00000108041.8	ENSMUSG00000073889.11	Il11ra1	chr4	protein_coding	interleukin 11 receptor, alpha chain 1
chr4	41760551	41763582	+	41702894	41763582	A5SS	0.2	50	50	ENSMUST00000108041.8	ENSMUSG00000073889.11	Il11ra1	chr4	protein_coding	interleukin 11 receptor, alpha chain 1
chr4	41761162	41763582	+	41702894	41763582	A5SS	0.2	50	50	ENSMUST00000108041.8	ENSMUSG00000073889.11	Il11ra1	chr4	protein_coding	interleukin 11 receptor, alpha chain 1
chr4	41762423	41763582	+	41702894	41763582	A5SS	0.2	50	50	ENSMUST00000108041.8	ENSMUSG00000073889.11	Il11ra1	chr4	protein_coding	interleukin 11 receptor, alpha chain 1
chr4	41760551;41761162	41761077;41763582	+	41760551	41763582	cassetteExon	0.5	100	100	ENSMUST00000098132.11	ENSMUSG00000073889.11	Il11ra1	chr4	protein_coding	interleukin 11 receptor, alpha chain 1
chr4	41760513	41763582	+	41760551	41763582	A5SS	0.2	50	50	ENSMUST00000098132.11	ENSMUSG00000073889.11	Il11ra1	chr4	protein_coding	interleukin 11 receptor, alpha chain 1
chr4	41762423	41763582	+	41760551	41763582	A5SS	0.2	50	50	ENSMUST00000098132.11	ENSMUSG00000073889.11	Il11ra1	chr4	protein_coding	interleukin 11 receptor, alpha chain 1
chr4	41760513	41763582	+	41761162	41763582	A5SS&ES	0.25	50	50	ENSMUST00000108040.8	ENSMUSG00000073889.11	Il11ra1	chr4	protein_coding	interleukin 11 receptor, alpha chain 1
chr4	41762423	41763582	+	41761162	41763582	A5SS	0.25	50	50	ENSMUST00000108040.8	ENSMUSG00000073889.11	Il11ra1	chr4	protein_coding	interleukin 11 receptor, alpha chain 1
chr4	41762423	41763582	+	41760513	41763582	A5SS	0.2	50	50	ENSMUST00000146608.8	ENSMUSG00000073889.11	Il11ra1	chr4	protein_coding	interleukin 11 receptor, alpha chain 1
chr4	41715455	41716396	-	41715238	41716396	A3SS	0.5	50	50	ENSMUST00000171641.2	ENSMUSG00000028447.12	Dctn3	chr4	protein_coding	dynactin 3
chr4	41724333	41725007	-	41724333;41724794	41724705;41725007	ES	0.5	50	50	ENSMUST00000171251.8	ENSMUSG00000066224.15	Arid3c	chr4	protein_coding	AT rich interactive domain 3C (BRIGHT-like)
chr4	41739580	41740776	-	41739580;41740642	41740550;41740776	ES	0.5	50	50	ENSMUST00000059354.15	ENSMUSG00000036078.17	Sigmar1	chr4	protein_coding	sigma non-opioid intracellular receptor 1
chr4	41740976	41745002	-	41740976	41741102	5pMXE	0.25	50	50	ENSMUST00000059354.15	ENSMUSG00000036078.17	Sigmar1	chr4	protein_coding	sigma non-opioid intracellular receptor 1
chr4	41740976	41755169	-	41740976	41741102	5pMXE	0.25	50	50	ENSMUST00000059354.15	ENSMUSG00000036078.17	Sigmar1	chr4	protein_coding	sigma non-opioid intracellular receptor 1
chr4	41740642	41740823	-	41740642	41740776	A5SS	0.5	50	50	ENSMUST00000059354.15	ENSMUSG00000036078.17	Sigmar1	chr4	protein_coding	sigma non-opioid intracellular receptor 1
chr4	41740976	41741094	-	41740976	41741102	A5SS	0.25	50	50	ENSMUST00000059354.15	ENSMUSG00000036078.17	Sigmar1	chr4	protein_coding	sigma non-opioid intracellular receptor 1
chr4	41740976	41755169	-	41740976	41745002	5pMXE	0.25	50	50	ENSMUST00000148223.8	ENSMUSG00000036078.17	Sigmar1	chr4	protein_coding	sigma non-opioid intracellular receptor 1
chr4	41740976	41741094	-	41740976	41745002	A5SS	0.25	50	50	ENSMUST00000148223.8	ENSMUSG00000036078.17	Sigmar1	chr4	protein_coding	sigma non-opioid intracellular receptor 1
chr4	41755088	41755169	-	41740976	41755169	A3SS	0.5	50	50	ENSMUST00000133590.2	ENSMUSG00000036078.17	Sigmar1	chr4	protein_coding	sigma non-opioid intracellular receptor 1
chr4	41739580	41740776	-	41739580	41740550	A5SS&ES	0.5	50	50	ENSMUST00000133590.2	ENSMUSG00000036078.17	Sigmar1	chr4	protein_coding	sigma non-opioid intracellular receptor 1
chr4	41740976	41741094	-	41740976	41755169	A5SS	0.25	50	50	ENSMUST00000133590.2	ENSMUSG00000036078.17	Sigmar1	chr4	protein_coding	sigma non-opioid intracellular receptor 1
chr4	41739580	41740776	-	41740642	41740776	3pMXE	0.5	50	50	ENSMUST00000149647.2	ENSMUSG00000036078.17	Sigmar1	chr4	protein_coding	sigma non-opioid intracellular receptor 1
chr4	41756561	41756939	+	41756561;41756811	41756682;41756939	ES	0.5	50	50	ENSMUST00000084695.11	ENSMUSG00000036073.18	Galt	chr4	protein_coding	galactose-1-phosphate uridyl transferase
chr4	41756130	41756344	+	41756130	41756347	A3SS	0.5	50	50	ENSMUST00000084695.11	ENSMUSG00000036073.18	Galt	chr4	protein_coding	galactose-1-phosphate uridyl transferase
chr4	41756561	41756939	+	41756811	41756939	A5SS	0.5	50	50	ENSMUST00000151490.8	ENSMUSG00000036073.18	Galt	chr4	protein_coding	galactose-1-phosphate uridyl transferase
chr4	41769976	41771138	-	41769976	41770118	5pMXE	0.5	50	50	ENSMUST00000108033.8	ENSMUSG00000073888.14	Ccl27a	chr4	protein_coding	chemokine (C-C motif) ligand 27A
chr4	41771213	41773465	-	41771295	41773465	A3SS	0.2	50	50	ENSMUST00000138337.8	ENSMUSG00000073888.14	Ccl27a	chr4	protein_coding	chemokine (C-C motif) ligand 27A
chr4	41771235	41773465	-	41771295	41773465	A3SS	0.2	50	50	ENSMUST00000138337.8	ENSMUSG00000073888.14	Ccl27a	chr4	protein_coding	chemokine (C-C motif) ligand 27A
chr4	41771290	41773465	-	41771295	41773465	A3SS	0.2	50	50	ENSMUST00000138337.8	ENSMUSG00000073888.14	Ccl27a	chr4	protein_coding	chemokine (C-C motif) ligand 27A
chr4	41773350	41773465	-	41771295	41773465	A3SS	0.2	50	50	ENSMUST00000138337.8	ENSMUSG00000073888.14	Ccl27a	chr4	protein_coding	chemokine (C-C motif) ligand 27A
chr4	41771213	41773465	-	41771235	41773465	A3SS	0.2	50	50	ENSMUST00000136768.8	ENSMUSG00000073888.14	Ccl27a	chr4	protein_coding	chemokine (C-C motif) ligand 27A
chr4	41771290	41773465	-	41771235	41773465	A3SS	0.2	50	50	ENSMUST00000136768.8	ENSMUSG00000073888.14	Ccl27a	chr4	protein_coding	chemokine (C-C motif) ligand 27A
chr4	41773350	41773465	-	41771235	41773465	A3SS	0.2	50	50	ENSMUST00000136768.8	ENSMUSG00000073888.14	Ccl27a	chr4	protein_coding	chemokine (C-C motif) ligand 27A
chr4	41771290	41773465	-	41771213	41773465	A3SS	0.2	50	50	ENSMUST00000151142.8	ENSMUSG00000073888.14	Ccl27a	chr4	protein_coding	chemokine (C-C motif) ligand 27A
chr4	41773350	41773465	-	41771213	41773465	A3SS	0.2	50	50	ENSMUST00000151142.8	ENSMUSG00000073888.14	Ccl27a	chr4	protein_coding	chemokine (C-C motif) ligand 27A
chr4	41773803	41774170	-	41773803	41774100	5pMXE	0.33	50	50	ENSMUST00000108037.9	ENSMUSG00000073888.14	Ccl27a	chr4	protein_coding	chemokine (C-C motif) ligand 27A
chr4	41773803	41774196	-	41773803	41774100	5pMXE	0.33	50	50	ENSMUST00000108037.9	ENSMUSG00000073888.14	Ccl27a	chr4	protein_coding	chemokine (C-C motif) ligand 27A
chr4	41773350	41773465	-	41771290	41773465	A3SS	0.2	50	50	ENSMUST00000155322.8	ENSMUSG00000073888.14	Ccl27a	chr4	protein_coding	chemokine (C-C motif) ligand 27A
chr4	41773803	41774196	-	41773803	41774170	A5SS	0.33	50	50	ENSMUST00000133556.8	ENSMUSG00000073888.14	Ccl27a	chr4	protein_coding	chemokine (C-C motif) ligand 27A
chr4	41916723	41941206	-	41902425	41941206	A3SS	0.5	50	50	ENSMUST00000141375.8	ENSMUSG00000085730.8	Gm13307	chr4	lncRNA	predicted gene 13307
chr4	41941291	41941555	-	41941291	41941929	A5SS	0.5	50	50	ENSMUST00000141375.8	ENSMUSG00000085730.8	Gm13307	chr4	lncRNA	predicted gene 13307
chr4	41941648	41942017	+	41941622	41942017	A5SS	0.33	50	50	ENSMUST00000108028.9	ENSMUSG00000078747.10	Gm20878	chr4	protein_coding	predicted gene, 20878
chr4	41941718	41942017	+	41941622	41942017	A5SS	0.33	50	50	ENSMUST00000108028.9	ENSMUSG00000078747.10	Gm20878	chr4	protein_coding	predicted gene, 20878
chr4	41941648	41942017	+	41941718	41942017	A5SS	0.33	50	50	ENSMUST00000123767.8	ENSMUSG00000078747.10	Gm20878	chr4	protein_coding	predicted gene, 20878
chr4	42071182;42071532	42071400;42072506	-	42071182	42072506	cassetteExon	0.5	100	100	ENSMUST00000239354.2	ENSMUSG00000118633.2	Gm21104	chr4	transcribed_unprocessed_pseudogene	predicted gene, 21104
chr4	42154176	42157046	+	42154176	42155720	3pMXE	0.33	50	50	ENSMUST00000131704.8	ENSMUSG00000073877.11	Gm13306	chr4	protein_coding	predicted gene 13306
chr4	42154176	42154291	+	42154176	42155720	A3SS	0.33	50	50	ENSMUST00000131704.8	ENSMUSG00000073877.11	Gm13306	chr4	protein_coding	predicted gene 13306
chr4	42154176	42157046	+	42154176	42154291	3pMXE	0.33	50	50	ENSMUST00000154600.2	ENSMUSG00000073877.11	Gm13306	chr4	protein_coding	predicted gene 13306
chr4	42158198	42158340	+	42157143	42158340	A5SS	0.5	50	50	ENSMUST00000108018.9	ENSMUSG00000073877.11	Gm13306	chr4	protein_coding	predicted gene 13306
chr4	42581971	42582558	+	42552879	42582558	A5SS	0.5	50	50	ENSMUST00000178906.2	ENSMUSG00000095258.3	Gm2163	chr4	transcribed_unprocessed_pseudogene	predicted gene 2163
chr4	42761103	42812308	+	42761103	42767135	3pMXE	0.5	50	50	ENSMUST00000145453.8	ENSMUSG00000054885.12	4930578G10Rik	chr4	protein_coding	RIKEN cDNA 4930578G10 gene
chr4	42754950	42756270	-	42754950;42755300	42755168;42756270	ES	0.5	50	50	ENSMUST00000102957.6	ENSMUSG00000071005.8	Ccl19	chr4	protein_coding	chemokine (C-C motif) ligand 19
chr4	42872119	42873494	-	42872119;42873099	42873036;42873494	ES	0.5	50	50	ENSMUST00000055944.11	ENSMUSG00000050141.14	Fam205c	chr4	protein_coding	family with sequence similarity 205, member C
chr4	42868750	42871500	-	42868747	42871500	A3SS	0.5	50	50	ENSMUST00000055944.11	ENSMUSG00000050141.14	Fam205c	chr4	protein_coding	family with sequence similarity 205, member C
chr4	42872119	42874023	-	42872119	42873494	5pMXE	0.33	50	50	ENSMUST00000134400.3	ENSMUSG00000050141.14	Fam205c	chr4	protein_coding	family with sequence similarity 205, member C
chr4	42872119;42873539	42873494;42874023	-	42872119	42874023	cassetteExon	0.5	100	100	ENSMUST00000144112.2	ENSMUSG00000050141.14	Fam205c	chr4	protein_coding	family with sequence similarity 205, member C
chr4	42872119	42873036	-	42872119	42874023	A5SS	0.33	50	50	ENSMUST00000144112.2	ENSMUSG00000050141.14	Fam205c	chr4	protein_coding	family with sequence similarity 205, member C
chr4	42916829	42922567	+	42916829	42937841	A3SS	0.33	50	50	ENSMUST00000151824.2	ENSMUSG00000036062.14	Phf24	chr4	protein_coding	PHD finger protein 24
chr4	42916829	42933616	+	42916829	42937841	A3SS	0.33	50	50	ENSMUST00000151824.2	ENSMUSG00000036062.14	Phf24	chr4	protein_coding	PHD finger protein 24
chr4	42934770	42937841	+	42916829	42937841	A5SS	0.33	50	50	ENSMUST00000151824.2	ENSMUSG00000036062.14	Phf24	chr4	protein_coding	PHD finger protein 24
chr4	42934818	42937841	+	42916829	42937841	A5SS	0.33	50	50	ENSMUST00000151824.2	ENSMUSG00000036062.14	Phf24	chr4	protein_coding	PHD finger protein 24
chr4	42916829	42933616	+	42916829;42922693	42922567;42933616	ES	0.33	50	50	ENSMUST00000132173.8	ENSMUSG00000036062.14	Phf24	chr4	protein_coding	PHD finger protein 24
chr4	42917414	42922567	+	42916829	42922567	A5SS	0.5	50	50	ENSMUST00000132173.8	ENSMUSG00000036062.14	Phf24	chr4	protein_coding	PHD finger protein 24
chr4	42917414	42933616	+	42922693	42933616	A5SS&ES	0.33	50	50	ENSMUST00000132173.8	ENSMUSG00000036062.14	Phf24	chr4	protein_coding	PHD finger protein 24
chr4	42938775	42939505	+	42938775;42939181	42939086;42939505	ES	0.5	50	50	ENSMUST00000107975.8	ENSMUSG00000036062.14	Phf24	chr4	protein_coding	PHD finger protein 24
chr4	42917414	42933616	+	42916829	42933616	A5SS	0.33	50	50	ENSMUST00000107975.8	ENSMUSG00000036062.14	Phf24	chr4	protein_coding	PHD finger protein 24
chr4	42934770	42937841	+	42934818	42937841	A5SS	0.33	50	50	ENSMUST00000107975.8	ENSMUSG00000036062.14	Phf24	chr4	protein_coding	PHD finger protein 24
chr4	42917414	42933616	+	42917414;42922693	42922567;42933616	ES	0.5	50	50	ENSMUST00000107976.9	ENSMUSG00000036062.14	Phf24	chr4	protein_coding	PHD finger protein 24
chr4	42933667	42934698	+	42933667	42933779	A3SS&ES	0.5	50	50	ENSMUST00000107976.9	ENSMUSG00000036062.14	Phf24	chr4	protein_coding	PHD finger protein 24
chr4	42916829	42933616	+	42922693	42933616	5pMXE	0.33	50	50	ENSMUST00000139100.2	ENSMUSG00000036062.14	Phf24	chr4	protein_coding	PHD finger protein 24
chr4	42950004	42953141	+	42950004;42950943	42950799;42953141	ES	0.33	50	50	ENSMUST00000037872.10	ENSMUSG00000036052.15	Dnajb5	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member B5
chr4	42950004;42950742	42950476;42953141	+	42950004;42950943	42950799;42953141	MXE	0.5	100	100	ENSMUST00000037872.10	ENSMUSG00000036052.15	Dnajb5	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member B5
chr4	42950004;42950742	42950476;42953141	+	42950004	42953141	cassetteExon	0.5	100	100	ENSMUST00000098112.9	ENSMUSG00000036052.15	Dnajb5	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member B5
chr4	42950004;42950943	42950476;42953141	+	42950004	42953141	cassetteExon	0.5	100	100	ENSMUST00000098112.9	ENSMUSG00000036052.15	Dnajb5	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member B5
chr4	42950004	42950799	+	42950004	42950476	3pMXE	0.33	50	50	ENSMUST00000123501.2	ENSMUSG00000036052.15	Dnajb5	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member B5
chr4	42950004	42953141	+	42950004	42950476	3pMXE	0.33	50	50	ENSMUST00000123501.2	ENSMUSG00000036052.15	Dnajb5	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member B5
chr4	42950004	42953141	+	42950742	42953141	5pMXE	0.33	50	50	ENSMUST00000084662.12	ENSMUSG00000036052.15	Dnajb5	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member B5
chr4	42950943	42953141	+	42950742	42953141	A5SS	0.33	50	50	ENSMUST00000084662.12	ENSMUSG00000036052.15	Dnajb5	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member B5
chr4	42950004	42953141	+	42950943	42953141	5pMXE	0.33	50	50	ENSMUST00000153807.2	ENSMUSG00000036052.15	Dnajb5	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member B5
chr4	42969652;42970209	42970132;42970864	+	42969652	42970864	cassetteExon	0.5	100	100	ENSMUST00000189414.2	ENSMUSG00000028451.13	1700022I11Rik	chr4	protein_coding	RIKEN cDNA 1700022I11 gene
chr4	42970101	42970864	+	42969652	42970864	A5SS	0.33	50	50	ENSMUST00000189414.2	ENSMUSG00000028451.13	1700022I11Rik	chr4	protein_coding	RIKEN cDNA 1700022I11 gene
chr4	42970209	42977286	+	42970209	42970864	3pMXE	0.5	50	50	ENSMUST00000185904.2	ENSMUSG00000028451.13	1700022I11Rik	chr4	protein_coding	RIKEN cDNA 1700022I11 gene
chr4	42970101	42970864	+	42970209	42970864	A5SS&ES	0.33	50	50	ENSMUST00000185904.2	ENSMUSG00000028451.13	1700022I11Rik	chr4	protein_coding	RIKEN cDNA 1700022I11 gene
chr4	42969652	42970864	+	42970209	42970864	5pMXE	0.33	50	50	ENSMUST00000030163.12	ENSMUSG00000028451.13	1700022I11Rik	chr4	protein_coding	RIKEN cDNA 1700022I11 gene
chr4	43005033	43006462	-	43005033;43005277	43005211;43006462	ES	0.5	50	50	ENSMUST00000030165.5	ENSMUSG00000028453.11	Fancg	chr4	protein_coding	Fanconi anemia, complementation group G
chr4	43003312	43003783	-	43003344	43003783	A3SS	0.5	50	50	ENSMUST00000030165.5	ENSMUSG00000028453.11	Fancg	chr4	protein_coding	Fanconi anemia, complementation group G
chr4	43005008	43005211	-	43005033	43005211	A3SS	0.5	50	50	ENSMUST00000030165.5	ENSMUSG00000028453.11	Fancg	chr4	protein_coding	Fanconi anemia, complementation group G
chr4	43006896	43007049	-	43006896	43006984	A5SS	0.5	50	50	ENSMUST00000030165.5	ENSMUSG00000028453.11	Fancg	chr4	protein_coding	Fanconi anemia, complementation group G
chr4	43010172	43010280	-	43010172	43010256	A5SS	0.5	50	50	ENSMUST00000123332.8	ENSMUSG00000028453.11	Fancg	chr4	protein_coding	Fanconi anemia, complementation group G
chr4	43005033	43006462	-	43005277	43006462	A3SS&ES	0.5	50	50	ENSMUST00000127067.8	ENSMUSG00000028453.11	Fancg	chr4	protein_coding	Fanconi anemia, complementation group G
chr4	43019439	43019647	-	43019435	43019647	A3SS	0.5	50	50	ENSMUST00000149333.8	ENSMUSG00000028454.17	Pigo	chr4	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class O
chr4	43019781	43020267	-	43019853	43020267	A3SS	0.5	50	50	ENSMUST00000149333.8	ENSMUSG00000028454.17	Pigo	chr4	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class O
chr4	43025074	43025286	-	43025074	43025780	A5SS	0.5	50	50	ENSMUST00000067481.6	ENSMUSG00000028454.17	Pigo	chr4	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class O
chr4	43030298	43030971	-	43030298;43030535	43030436;43030971	ES	0.5	50	50	ENSMUST00000030169.15	ENSMUSG00000028455.16	Stoml2	chr4	protein_coding	stomatin (Epb7.2)-like 2
chr4	43030535	43031329	-	43030535;43031108	43030971;43031329	ES	0.33	50	50	ENSMUST00000030169.15	ENSMUSG00000028455.16	Stoml2	chr4	protein_coding	stomatin (Epb7.2)-like 2
chr4	43029553	43029770	-	43029637	43029770	A3SS	0.5	50	50	ENSMUST00000030169.15	ENSMUSG00000028455.16	Stoml2	chr4	protein_coding	stomatin (Epb7.2)-like 2
chr4	43031129	43031329	-	43031108	43031329	A3SS	0.33	50	50	ENSMUST00000030169.15	ENSMUSG00000028455.16	Stoml2	chr4	protein_coding	stomatin (Epb7.2)-like 2
chr4	43030298;43031108	43030971;43031329	-	43030298;43030535	43030436;43031329	MXE	0.5	100	100	ENSMUST00000136326.8	ENSMUSG00000028455.16	Stoml2	chr4	protein_coding	stomatin (Epb7.2)-like 2
chr4	43030298;43031129	43030971;43031329	-	43030298;43030535	43030436;43031329	MXE	0.5	100	100	ENSMUST00000136326.8	ENSMUSG00000028455.16	Stoml2	chr4	protein_coding	stomatin (Epb7.2)-like 2
chr4	43030535;43031129	43030971;43031329	-	43030535	43031329	cassetteExon	0.5	100	100	ENSMUST00000136326.8	ENSMUSG00000028455.16	Stoml2	chr4	protein_coding	stomatin (Epb7.2)-like 2
chr4	43030298	43030971	-	43030298	43030436	5pMXE	0.5	50	50	ENSMUST00000135660.8	ENSMUSG00000028455.16	Stoml2	chr4	protein_coding	stomatin (Epb7.2)-like 2
chr4	43030535	43031329	-	43030535	43030971	A5SS	0.5	50	50	ENSMUST00000127645.2	ENSMUSG00000028455.16	Stoml2	chr4	protein_coding	stomatin (Epb7.2)-like 2
chr4	43030535	43031329	-	43031108	43031329	A3SS	0.33	50	50	ENSMUST00000126026.2	ENSMUSG00000028455.16	Stoml2	chr4	protein_coding	stomatin (Epb7.2)-like 2
chr4	43034764	43035836	-	43034764;43035001	43034943;43035836	ES	0.5	50	50	ENSMUST00000107958.8	ENSMUSG00000036002.13	Fam214b	chr4	protein_coding	family with sequence similarity 214, member B
chr4	43037206	43045648	-	43037206	43039966	5pMXE	0.16	50	50	ENSMUST00000107958.8	ENSMUSG00000036002.13	Fam214b	chr4	protein_coding	family with sequence similarity 214, member B
chr4	43037206	43045807	-	43037206	43039966	5pMXE	0.16	50	50	ENSMUST00000107958.8	ENSMUSG00000036002.13	Fam214b	chr4	protein_coding	family with sequence similarity 214, member B
chr4	43037206	43046104	-	43037206	43039966	5pMXE	0.16	50	50	ENSMUST00000107958.8	ENSMUSG00000036002.13	Fam214b	chr4	protein_coding	family with sequence similarity 214, member B
chr4	43037206	43039233	-	43037206	43039966	A5SS	0.16	50	50	ENSMUST00000107958.8	ENSMUSG00000036002.13	Fam214b	chr4	protein_coding	family with sequence similarity 214, member B
chr4	43037206	43039815	-	43037206	43039966	A5SS	0.16	50	50	ENSMUST00000107958.8	ENSMUSG00000036002.13	Fam214b	chr4	protein_coding	family with sequence similarity 214, member B
chr4	43039918	43040274	-	43039899	43040274	A3SS	0.5	50	50	ENSMUST00000107959.8	ENSMUSG00000036002.13	Fam214b	chr4	protein_coding	family with sequence similarity 214, member B
chr4	43037206	43039233	-	43037206	43039815	A5SS	0.33	50	50	ENSMUST00000107959.8	ENSMUSG00000036002.13	Fam214b	chr4	protein_coding	family with sequence similarity 214, member B
chr4	43037206	43045807	-	43037206	43045648	5pMXE	0.16	50	50	ENSMUST00000107956.8	ENSMUSG00000036002.13	Fam214b	chr4	protein_coding	family with sequence similarity 214, member B
chr4	43037206	43046104	-	43037206	43045648	5pMXE	0.16	50	50	ENSMUST00000107956.8	ENSMUSG00000036002.13	Fam214b	chr4	protein_coding	family with sequence similarity 214, member B
chr4	43037206	43039233	-	43037206	43045648	A5SS	0.16	50	50	ENSMUST00000107956.8	ENSMUSG00000036002.13	Fam214b	chr4	protein_coding	family with sequence similarity 214, member B
chr4	43037206	43039815	-	43037206	43045648	A5SS	0.16	50	50	ENSMUST00000107956.8	ENSMUSG00000036002.13	Fam214b	chr4	protein_coding	family with sequence similarity 214, member B
chr4	43037206	43046104	-	43037206	43045807	5pMXE	0.16	50	50	ENSMUST00000107957.8	ENSMUSG00000036002.13	Fam214b	chr4	protein_coding	family with sequence similarity 214, member B
chr4	43037206	43039233	-	43037206	43045807	A5SS	0.16	50	50	ENSMUST00000107957.8	ENSMUSG00000036002.13	Fam214b	chr4	protein_coding	family with sequence similarity 214, member B
chr4	43037206	43039815	-	43037206	43045807	A5SS	0.16	50	50	ENSMUST00000107957.8	ENSMUSG00000036002.13	Fam214b	chr4	protein_coding	family with sequence similarity 214, member B
chr4	43037206	43039233	-	43037206	43046104	A5SS	0.16	50	50	ENSMUST00000036462.12	ENSMUSG00000036002.13	Fam214b	chr4	protein_coding	family with sequence similarity 214, member B
chr4	43037206	43039815	-	43037206	43046104	A5SS	0.16	50	50	ENSMUST00000036462.12	ENSMUSG00000036002.13	Fam214b	chr4	protein_coding	family with sequence similarity 214, member B
chr4	43051377;43053051	43052945;43053154	+	43051377	43053154	cassetteExon	0.5	100	100	ENSMUST00000209785.2	ENSMUSG00000096974.3	Gm26881	chr4	lncRNA	predicted gene, 26881
chr4	43046243	43051237	+	43046277	43051237	A5SS	0.5	50	50	ENSMUST00000209785.2	ENSMUSG00000096974.3	Gm26881	chr4	lncRNA	predicted gene, 26881
chr4	43059285;43115160	43115103;43165744	+	43059285	43165744	cassetteExon	0.5	100	100	ENSMUST00000126878.2	ENSMUSG00000028456.19	Unc13b	chr4	protein_coding	unc-13 homolog B
chr4	43059285	43087903	+	43059285	43165744	A3SS	0.33	50	50	ENSMUST00000126878.2	ENSMUSG00000028456.19	Unc13b	chr4	protein_coding	unc-13 homolog B
chr4	43161478	43165744	+	43059285	43165744	A5SS	0.33	50	50	ENSMUST00000126878.2	ENSMUSG00000028456.19	Unc13b	chr4	protein_coding	unc-13 homolog B
chr4	43255917	43256776	+	43255917;43256272	43256129;43256776	ES	0.5	50	50	ENSMUST00000207569.2	ENSMUSG00000028456.19	Unc13b	chr4	protein_coding	unc-13 homolog B
chr4	43115160;43161478	43161443;43165744	+	43115160	43165744	cassetteExon	0.5	100	100	ENSMUST00000207569.2	ENSMUSG00000028456.19	Unc13b	chr4	protein_coding	unc-13 homolog B
chr4	43232608;43233909	43233904;43234666	+	43232608	43234666	cassetteExon	0.5	100	100	ENSMUST00000207569.2	ENSMUSG00000028456.19	Unc13b	chr4	protein_coding	unc-13 homolog B
chr4	43259609;43261049	43260993;43261682	+	43259609	43261682	cassetteExon	0.5	100	100	ENSMUST00000207569.2	ENSMUSG00000028456.19	Unc13b	chr4	protein_coding	unc-13 homolog B
chr4	43245596	43249460	+	43245596	43249457	A3SS	0.5	50	50	ENSMUST00000207569.2	ENSMUSG00000028456.19	Unc13b	chr4	protein_coding	unc-13 homolog B
chr4	43227947	43230118	+	43182859	43230118	A5SS	0.33	50	50	ENSMUST00000207569.2	ENSMUSG00000028456.19	Unc13b	chr4	protein_coding	unc-13 homolog B
chr4	43165978	43166668	+	43165978	43180328	A3SS	0.5	50	50	ENSMUST00000079978.13	ENSMUSG00000028456.19	Unc13b	chr4	protein_coding	unc-13 homolog B
chr4	43178334	43180328	+	43165978	43180328	A5SS	0.5	50	50	ENSMUST00000079978.13	ENSMUSG00000028456.19	Unc13b	chr4	protein_coding	unc-13 homolog B
chr4	43059285	43087903	+	43059285	43115103	A3SS	0.33	50	50	ENSMUST00000151611.9	ENSMUSG00000028456.19	Unc13b	chr4	protein_coding	unc-13 homolog B
chr4	43101874	43115103	+	43059285	43115103	A5SS	0.5	50	50	ENSMUST00000151611.9	ENSMUSG00000028456.19	Unc13b	chr4	protein_coding	unc-13 homolog B
chr4	43115160	43230118	+	43115160	43165744	3pMXE	0.33	50	50	ENSMUST00000171234.2	ENSMUSG00000028456.19	Unc13b	chr4	protein_coding	unc-13 homolog B
chr4	43115160	43161443	+	43115160	43230118	A3SS	0.33	50	50	ENSMUST00000132310.9	ENSMUSG00000028456.19	Unc13b	chr4	protein_coding	unc-13 homolog B
chr4	43182859	43230118	+	43115160	43230118	A5SS	0.33	50	50	ENSMUST00000132310.9	ENSMUSG00000028456.19	Unc13b	chr4	protein_coding	unc-13 homolog B
chr4	43227947	43230118	+	43115160	43230118	A5SS	0.33	50	50	ENSMUST00000132310.9	ENSMUSG00000028456.19	Unc13b	chr4	protein_coding	unc-13 homolog B
chr4	43255917	43256776	+	43255917	43256129	3pMXE	0.5	50	50	ENSMUST00000153168.3	ENSMUSG00000028456.19	Unc13b	chr4	protein_coding	unc-13 homolog B
chr4	43291731;43302493	43302256;43302582	+	43291731	43302582	cassetteExon	0.5	100	100	ENSMUST00000056010.13	ENSMUSG00000028457.19	Atp8b5	chr4	protein_coding	ATPase, class I, type 8B, member 5
chr4	43267242	43271226	+	43267242	43271244	A3SS	0.5	50	50	ENSMUST00000056010.13	ENSMUSG00000028457.19	Atp8b5	chr4	protein_coding	ATPase, class I, type 8B, member 5
chr4	43291731	43302256	+	43291731	43308488	A3SS	0.33	50	50	ENSMUST00000136262.8	ENSMUSG00000028457.19	Atp8b5	chr4	protein_coding	ATPase, class I, type 8B, member 5
chr4	43291731	43302582	+	43291731	43308488	A3SS	0.33	50	50	ENSMUST00000136262.8	ENSMUSG00000028457.19	Atp8b5	chr4	protein_coding	ATPase, class I, type 8B, member 5
chr4	43305829	43308488	+	43291731	43308488	A5SS	0.5	50	50	ENSMUST00000136262.8	ENSMUSG00000028457.19	Atp8b5	chr4	protein_coding	ATPase, class I, type 8B, member 5
chr4	43382199;43413054	43413005;43414628	+	43382199	43414628	cassetteExon	0.5	100	100	ENSMUST00000035645.12	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43383759	43414628	+	43382199	43414628	A5SS	0.16	50	50	ENSMUST00000035645.12	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43384433	43414628	+	43382199	43414628	A5SS	0.16	50	50	ENSMUST00000035645.12	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43384433	43421605	+	43416718	43421605	A5SS&ES	0.16	50	50	ENSMUST00000035645.12	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43401524	43414628	+	43382199	43414628	A5SS	0.16	50	50	ENSMUST00000035645.12	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43401524	43421605	+	43416718	43421605	A5SS&ES	0.16	50	50	ENSMUST00000035645.12	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43406680	43414628	+	43382199	43414628	A5SS	0.16	50	50	ENSMUST00000035645.12	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43406680	43421605	+	43416718	43421605	A5SS&ES	0.16	50	50	ENSMUST00000035645.12	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43407493	43421605	+	43416718	43421605	A5SS&ES	0.16	50	50	ENSMUST00000035645.12	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43416402	43421605	+	43416718	43421605	A5SS	0.16	50	50	ENSMUST00000035645.12	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43425649	43426228	+	43426128	43426228	A5SS	0.5	50	50	ENSMUST00000035645.12	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43383759	43413005	+	43382199	43413005	A5SS	0.33	50	50	ENSMUST00000144911.8	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43383759	43414628	+	43413054	43414628	A5SS&ES	0.16	50	50	ENSMUST00000144911.8	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43384433	43414628	+	43413054	43414628	A5SS&ES	0.16	50	50	ENSMUST00000144911.8	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43401524	43414628	+	43413054	43414628	A5SS&ES	0.16	50	50	ENSMUST00000144911.8	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43406680	43413005	+	43382199	43413005	A5SS	0.33	50	50	ENSMUST00000144911.8	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43406680	43414628	+	43413054	43414628	A5SS&ES	0.16	50	50	ENSMUST00000144911.8	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43383759;43413054	43413005;43414628	+	43383759	43414628	cassetteExon	0.5	100	100	ENSMUST00000135216.2	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43384433	43414628	+	43383759	43414628	A5SS	0.16	50	50	ENSMUST00000135216.2	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43401524	43414628	+	43383759	43414628	A5SS	0.16	50	50	ENSMUST00000135216.2	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43406680	43414628	+	43383759	43414628	A5SS	0.16	50	50	ENSMUST00000135216.2	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43406680	43413005	+	43383759	43413005	A5SS	0.33	50	50	ENSMUST00000152322.8	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43384433	43414628	+	43384433	43421605	A3SS	0.5	50	50	ENSMUST00000150066.2	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43401524	43421605	+	43384433	43421605	A5SS	0.16	50	50	ENSMUST00000150066.2	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43406680	43421605	+	43384433	43421605	A5SS	0.16	50	50	ENSMUST00000150066.2	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43407493	43421605	+	43384433	43421605	A5SS	0.16	50	50	ENSMUST00000150066.2	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43416402	43421605	+	43384433	43421605	A5SS	0.16	50	50	ENSMUST00000150066.2	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43401524	43414628	+	43384433	43414628	A5SS	0.16	50	50	ENSMUST00000136360.2	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43406680	43414628	+	43384433	43414628	A5SS	0.16	50	50	ENSMUST00000136360.2	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43401524	43414628	+	43401524	43421605	A3SS	0.5	50	50	ENSMUST00000125393.8	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43406680	43421605	+	43401524	43421605	A5SS	0.16	50	50	ENSMUST00000125393.8	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43407493	43421605	+	43401524	43421605	A5SS	0.16	50	50	ENSMUST00000125393.8	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43416402	43421605	+	43401524	43421605	A5SS	0.16	50	50	ENSMUST00000125393.8	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43406680	43414628	+	43401524	43414628	A5SS	0.16	50	50	ENSMUST00000125399.2	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43406680	43421605	+	43406680;43416718	43414628;43421605	ES	0.25	50	50	ENSMUST00000098106.9	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43406680;43413054	43413005;43414628	+	43406680	43414628	cassetteExon	0.5	100	100	ENSMUST00000098106.9	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43406680	43413005	+	43406680	43421605	A3SS	0.33	50	50	ENSMUST00000149556.2	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43406680	43414628	+	43406680	43421605	A3SS	0.33	50	50	ENSMUST00000149556.2	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43407493	43421605	+	43406680	43421605	A5SS	0.16	50	50	ENSMUST00000149556.2	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43416402	43421605	+	43406680	43421605	A5SS	0.16	50	50	ENSMUST00000149556.2	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43416402	43421605	+	43407493	43421605	A5SS	0.16	50	50	ENSMUST00000149221.2	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43416718	43425297	+	43424944	43425297	A5SS&ES	0.5	50	50	ENSMUST00000173682.8	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43416718	43421605	+	43416718	43425297	A3SS	0.5	50	50	ENSMUST00000146710.2	ENSMUSG00000035969.16	Rusc2	chr4	protein_coding	RUN and SH3 domain containing 2
chr4	43428169	43429028	-	43428169;43428466	43428243;43429028	ES	0.5	50	50	ENSMUST00000052829.10	ENSMUSG00000042788.13	Fam166b	chr4	protein_coding	family with sequence similarity 166, member B
chr4	43427839	43428033	-	43427839	43427973	A5SS	0.5	50	50	ENSMUST00000052829.10	ENSMUSG00000042788.13	Fam166b	chr4	protein_coding	family with sequence similarity 166, member B
chr4	43427565	43427788	-	43427710	43427788	A3SS	0.5	50	50	ENSMUST00000171134.9	ENSMUSG00000042788.13	Fam166b	chr4	protein_coding	family with sequence similarity 166, member B
chr4	43444719	43445284	+	43444719;43445123	43445041;43445284	ES	0.5	50	50	ENSMUST00000060864.13	ENSMUSG00000028458.13	Tesk1	chr4	protein_coding	testis specific protein kinase 1
chr4	43444719	43445284	+	43444719	43445041	A3SS	0.5	50	50	ENSMUST00000126350.2	ENSMUSG00000028458.13	Tesk1	chr4	protein_coding	testis specific protein kinase 1
chr4	43444719	43445284	+	43445123	43445284	A5SS	0.5	50	50	ENSMUST00000137178.8	ENSMUSG00000028458.13	Tesk1	chr4	protein_coding	testis specific protein kinase 1
chr4	43452639;43453172	43453083;43454242	-	43452639	43454242	cassetteExon	0.5	100	100	ENSMUST00000098104.10	ENSMUSG00000028459.12	Cd72	chr4	protein_coding	CD72 antigen
chr4	43452639;43453211	43453083;43454242	-	43452639	43454242	cassetteExon	0.5	100	100	ENSMUST00000098104.10	ENSMUSG00000028459.12	Cd72	chr4	protein_coding	CD72 antigen
chr4	43452639;43453712	43453641;43454242	-	43452639	43454242	cassetteExon	0.5	100	100	ENSMUST00000098104.10	ENSMUSG00000028459.12	Cd72	chr4	protein_coding	CD72 antigen
chr4	43448394	43449452	-	43448415	43449452	A3SS	0.5	50	50	ENSMUST00000098104.10	ENSMUSG00000028459.12	Cd72	chr4	protein_coding	CD72 antigen
chr4	43449549	43450070	-	43449528	43450070	A3SS	0.5	50	50	ENSMUST00000098104.10	ENSMUSG00000028459.12	Cd72	chr4	protein_coding	CD72 antigen
chr4	43452639	43453641	-	43452639;43453172	43453083;43453641	ES	0.5	50	50	ENSMUST00000107926.8	ENSMUSG00000028459.12	Cd72	chr4	protein_coding	CD72 antigen
chr4	43453172	43454242	-	43453172;43453712	43453641;43454242	ES	0.25	50	50	ENSMUST00000107926.8	ENSMUSG00000028459.12	Cd72	chr4	protein_coding	CD72 antigen
chr4	43453211	43454242	-	43453712	43454242	A3SS&ES	0.25	50	50	ENSMUST00000107926.8	ENSMUSG00000028459.12	Cd72	chr4	protein_coding	CD72 antigen
chr4	43452639;43453712	43453641;43454242	-	43452639;43453172	43453083;43454242	MXE	0.5	100	100	ENSMUST00000098105.4	ENSMUSG00000028459.12	Cd72	chr4	protein_coding	CD72 antigen
chr4	43453211	43454242	-	43453172	43454242	A3SS	0.25	50	50	ENSMUST00000098105.4	ENSMUSG00000028459.12	Cd72	chr4	protein_coding	CD72 antigen
chr4	43452639;43453712	43453641;43454242	-	43452639;43453211	43453083;43454242	MXE	0.5	100	100	ENSMUST00000151868.2	ENSMUSG00000028459.12	Cd72	chr4	protein_coding	CD72 antigen
chr4	43493759	43495195	+	43493759	43493888	3pMXE	0.5	50	50	ENSMUST00000143073.8	ENSMUSG00000028461.13	Ccdc107	chr4	protein_coding	coiled-coil domain containing 107
chr4	43493536	43493608	+	43493023	43493608	A5SS	0.5	50	50	ENSMUST00000143073.8	ENSMUSG00000028461.13	Ccdc107	chr4	protein_coding	coiled-coil domain containing 107
chr4	43496720	43496821	-	43496717	43496821	A3SS	0.5	50	50	ENSMUST00000152134.8	ENSMUSG00000051517.15	Arhgef39	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 39
chr4	43497316	43497959	-	43497316;43497710	43497582;43497959	ES	0.5	50	50	ENSMUST00000054538.13	ENSMUSG00000051517.15	Arhgef39	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 39
chr4	43499016	43499470	-	43499016;43499337	43499243;43499470	ES	0.5	50	50	ENSMUST00000054538.13	ENSMUSG00000051517.15	Arhgef39	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 39
chr4	43497296	43497582	-	43497316	43497582	A3SS	0.5	50	50	ENSMUST00000054538.13	ENSMUSG00000051517.15	Arhgef39	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 39
chr4	43497710	43497881	-	43497710	43497959	A5SS	0.5	50	50	ENSMUST00000054538.13	ENSMUSG00000051517.15	Arhgef39	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 39
chr4	43499016	43499470	-	43499337	43499470	A3SS	0.5	50	50	ENSMUST00000128754.8	ENSMUSG00000051517.15	Arhgef39	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 39
chr4	43497316	43497959	-	43497710	43497959	A3SS	0.5	50	50	ENSMUST00000125834.8	ENSMUSG00000051517.15	Arhgef39	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 39
chr4	43506284	43507777	-	43504531	43507777	A3SS	0.5	50	50	ENSMUST00000149817.8	ENSMUSG00000087142.8	Gm12454	chr4	lncRNA	predicted gene 12454
chr4	43507963	43508585	-	43507963	43508612	A5SS	0.5	50	50	ENSMUST00000149817.8	ENSMUSG00000087142.8	Gm12454	chr4	lncRNA	predicted gene 12454
chr4	43509035	43510197	+	43509035;43509210	43509118;43510197	ES	0.5	50	50	ENSMUST00000030183.10	ENSMUSG00000028463.15	Car9	chr4	protein_coding	carbonic anhydrase 9
chr4	43510263	43512142	+	43510263;43511984	43511827;43512142	ES	0.5	50	50	ENSMUST00000030183.10	ENSMUSG00000028463.15	Car9	chr4	protein_coding	carbonic anhydrase 9
chr4	43507927	43508314	+	43507395	43508314	A5SS	0.5	50	50	ENSMUST00000030183.10	ENSMUSG00000028463.15	Car9	chr4	protein_coding	carbonic anhydrase 9
chr4	43510259	43512412	+	43512277	43512412	A5SS&ES	0.33	50	50	ENSMUST00000030183.10	ENSMUSG00000028463.15	Car9	chr4	protein_coding	carbonic anhydrase 9
chr4	43510263	43512412	+	43510259	43512412	A5SS	0.33	50	50	ENSMUST00000124114.8	ENSMUSG00000028463.15	Car9	chr4	protein_coding	carbonic anhydrase 9
chr4	43510263;43512277	43511827;43512412	+	43510263	43512412	cassetteExon	0.5	100	100	ENSMUST00000138073.2	ENSMUSG00000028463.15	Car9	chr4	protein_coding	carbonic anhydrase 9
chr4	43510263;43512277	43512142;43512412	+	43510263	43512412	cassetteExon	0.5	100	100	ENSMUST00000138073.2	ENSMUSG00000028463.15	Car9	chr4	protein_coding	carbonic anhydrase 9
chr4	43510263	43512412	+	43510263	43512142	A3SS	0.33	50	50	ENSMUST00000129996.2	ENSMUSG00000028463.15	Car9	chr4	protein_coding	carbonic anhydrase 9
chr4	43515841	43519389	-	43519297	43519389	A3SS&ES	0.5	50	50	ENSMUST00000150262.8	ENSMUSG00000028464.17	Tpm2	chr4	protein_coding	tropomyosin 2, beta
chr4	43516003	43518230	-	43514861	43518230	A3SS	0.5	50	50	ENSMUST00000150262.8	ENSMUSG00000028464.17	Tpm2	chr4	protein_coding	tropomyosin 2, beta
chr4	43518719	43519227	-	43519078	43519227	A3SS	0.5	50	50	ENSMUST00000150262.8	ENSMUSG00000028464.17	Tpm2	chr4	protein_coding	tropomyosin 2, beta
chr4	43518464;43518719	43518644;43519227	-	43518464;43519078	43519003;43519227	MXE	0.5	100	100	ENSMUST00000030184.12	ENSMUSG00000028464.17	Tpm2	chr4	protein_coding	tropomyosin 2, beta
chr4	43559717	43562130	-	43556783	43562130	A3SS	0.5	50	50	ENSMUST00000030187.14	ENSMUSG00000028465.17	Tln1	chr4	protein_coding	talin 1
chr4	43556783	43558381	-	43556783	43562130	A5SS	0.5	50	50	ENSMUST00000030187.14	ENSMUSG00000028465.17	Tln1	chr4	protein_coding	talin 1
chr4	43551038	43551186	-	43550051	43551186	A3SS	0.5	50	50	ENSMUST00000125509.2	ENSMUSG00000028465.17	Tln1	chr4	protein_coding	talin 1
chr4	43550051	43550198	-	43550051	43551186	A5SS	0.5	50	50	ENSMUST00000125509.2	ENSMUSG00000028465.17	Tln1	chr4	protein_coding	talin 1
chr4	43570911	43573751	-	43570911;43571407	43571189;43573751	ES	0.5	50	50	ENSMUST00000128403.8	ENSMUSG00000028467.16	Gba2	chr4	protein_coding	glucosidase beta 2
chr4	43570906	43571189	-	43570911	43571189	A3SS	0.5	50	50	ENSMUST00000128403.8	ENSMUSG00000028467.16	Gba2	chr4	protein_coding	glucosidase beta 2
chr4	43570911	43573751	-	43571407	43573751	A3SS&ES	0.5	50	50	ENSMUST00000144968.2	ENSMUSG00000028467.16	Gba2	chr4	protein_coding	glucosidase beta 2
chr4	43579007	43579375	+	43579003	43579375	A5SS	0.5	50	50	ENSMUST00000107886.9	ENSMUSG00000028468.16	Rgp1	chr4	protein_coding	RAB6A GEF compex partner 1
chr4	43579424	43579887	+	43579509	43579887	A5SS	0.5	50	50	ENSMUST00000107886.9	ENSMUSG00000028468.16	Rgp1	chr4	protein_coding	RAB6A GEF compex partner 1
chr4	43643174	43643606	+	43643174;43643409	43643335;43643606	ES	0.5	50	50	ENSMUST00000030191.15	ENSMUSG00000028469.16	Npr2	chr4	protein_coding	natriuretic peptide receptor 2
chr4	43646700	43646970	+	43646700	43646916	A3SS	0.5	50	50	ENSMUST00000030191.15	ENSMUSG00000028469.16	Npr2	chr4	protein_coding	natriuretic peptide receptor 2
chr4	43641330	43641549	+	43641326	43641549	A5SS	0.5	50	50	ENSMUST00000030191.15	ENSMUSG00000028469.16	Npr2	chr4	protein_coding	natriuretic peptide receptor 2
chr4	43644200	43644308	+	43644187	43644308	A5SS	0.5	50	50	ENSMUST00000030191.15	ENSMUSG00000028469.16	Npr2	chr4	protein_coding	natriuretic peptide receptor 2
chr4	43651809	43651928	-	43651791	43651928	A3SS	0.5	50	50	ENSMUST00000149575.8	ENSMUSG00000066196.12	Spag8	chr4	protein_coding	sperm associated antigen 8
chr4	43654411	43654513	-	43654422	43654513	A3SS	0.5	50	50	ENSMUST00000151238.8	ENSMUSG00000028470.11	Hint2	chr4	protein_coding	histidine triad nucleotide binding protein 2
chr4	43654614	43654716	-	43654585	43654716	A3SS	0.5	50	50	ENSMUST00000151238.8	ENSMUSG00000028470.11	Hint2	chr4	protein_coding	histidine triad nucleotide binding protein 2
chr4	43654790	43654906	-	43654820	43654906	A3SS	0.5	50	50	ENSMUST00000151238.8	ENSMUSG00000028470.11	Hint2	chr4	protein_coding	histidine triad nucleotide binding protein 2
chr4	43680792	43681959	+	43680792;43681314	43681046;43681959	ES	0.5	50	50	ENSMUST00000107865.9	ENSMUSG00000078716.11	Tmem8b	chr4	protein_coding	transmembrane protein 8B
chr4	43685390	43685528	+	43685390	43685526	A3SS	0.5	50	50	ENSMUST00000107865.9	ENSMUSG00000078716.11	Tmem8b	chr4	protein_coding	transmembrane protein 8B
chr4	43689807	43690031	+	43689807	43690027	A3SS	0.5	50	50	ENSMUST00000107865.9	ENSMUSG00000078716.11	Tmem8b	chr4	protein_coding	transmembrane protein 8B
chr4	43670034	43673900	+	43669172	43673900	A5SS	0.5	50	50	ENSMUST00000107865.9	ENSMUSG00000078716.11	Tmem8b	chr4	protein_coding	transmembrane protein 8B
chr4	43670034	43680659	+	43674644	43680659	A5SS&ES	0.5	50	50	ENSMUST00000107865.9	ENSMUSG00000078716.11	Tmem8b	chr4	protein_coding	transmembrane protein 8B
chr4	43670034	43685297	+	43682284	43685297	A5SS&ES	0.33	50	50	ENSMUST00000107865.9	ENSMUSG00000078716.11	Tmem8b	chr4	protein_coding	transmembrane protein 8B
chr4	43670034	43673900	+	43670034	43685297	A3SS	0.33	50	50	ENSMUST00000134869.8	ENSMUSG00000078716.11	Tmem8b	chr4	protein_coding	transmembrane protein 8B
chr4	43670034	43680659	+	43670034	43685297	A3SS	0.33	50	50	ENSMUST00000134869.8	ENSMUSG00000078716.11	Tmem8b	chr4	protein_coding	transmembrane protein 8B
chr4	43674644	43685297	+	43670034	43685297	A5SS	0.33	50	50	ENSMUST00000134869.8	ENSMUSG00000078716.11	Tmem8b	chr4	protein_coding	transmembrane protein 8B
chr4	43670034	43673900	+	43670034	43680659	A3SS	0.33	50	50	ENSMUST00000143339.8	ENSMUSG00000078716.11	Tmem8b	chr4	protein_coding	transmembrane protein 8B
chr4	43674644	43685297	+	43682284	43685297	A5SS&ES	0.33	50	50	ENSMUST00000143339.8	ENSMUSG00000078716.11	Tmem8b	chr4	protein_coding	transmembrane protein 8B
chr4	43680792	43681959	+	43680792	43681046	3pMXE	0.5	50	50	ENSMUST00000143774.2	ENSMUSG00000078716.11	Tmem8b	chr4	protein_coding	transmembrane protein 8B
chr4	43674644	43680659	+	43674644	43685297	A3SS	0.5	50	50	ENSMUST00000141864.2	ENSMUSG00000078716.11	Tmem8b	chr4	protein_coding	transmembrane protein 8B
chr4	43706818	43709926	-	43706818	43709782	A5SS	0.5	50	50	ENSMUST00000217544.2	ENSMUSG00000046450.4	Olfr71	chr4	protein_coding	olfactory receptor 71
chr4	43821438	43823434	-	43821438	43823324	A5SS	0.5	50	50	ENSMUST00000215406.2	ENSMUSG00000110970.3	Olfr156	chr4	protein_coding	olfactory receptor 156
chr4	43930315	43930889	+	43930315;43930752	43930576;43930889	ES	0.5	50	50	ENSMUST00000128463.8	ENSMUSG00000028476.14	Reck	chr4	protein_coding	reversion-inducing-cysteine-rich protein with kazal motifs
chr4	43940566	43940657	+	43939099	43940657	A5SS	0.5	50	50	ENSMUST00000128463.8	ENSMUSG00000028476.14	Reck	chr4	protein_coding	reversion-inducing-cysteine-rich protein with kazal motifs
chr4	43957773	43968112	+	43957773	43970500	A3SS	0.5	50	50	ENSMUST00000107855.2	ENSMUSG00000028480.15	Glipr2	chr4	protein_coding	GLI pathogenesis-related 2
chr4	43968675	43970500	+	43957773	43970500	A5SS	0.5	50	50	ENSMUST00000107855.2	ENSMUSG00000028480.15	Glipr2	chr4	protein_coding	GLI pathogenesis-related 2
chr4	44025560;44030268	44030215;44032401	+	44025560	44032401	cassetteExon	0.5	100	100	ENSMUST00000107846.10	ENSMUSG00000028478.19	Clta	chr4	protein_coding	clathrin, light polypeptide (Lca)
chr4	44025560;44031435	44031400;44032401	+	44025560	44032401	cassetteExon	0.5	100	100	ENSMUST00000107846.10	ENSMUSG00000028478.19	Clta	chr4	protein_coding	clathrin, light polypeptide (Lca)
chr4	44013002	44018813	+	44013008	44018813	A5SS	0.5	50	50	ENSMUST00000107846.10	ENSMUSG00000028478.19	Clta	chr4	protein_coding	clathrin, light polypeptide (Lca)
chr4	44025560;44030268	44030215;44031400	+	44025560	44031400	cassetteExon	0.5	100	100	ENSMUST00000107847.10	ENSMUSG00000028478.19	Clta	chr4	protein_coding	clathrin, light polypeptide (Lca)
chr4	44025560;44030268	44030215;44032401	+	44025560;44031435	44031400;44032401	MXE	0.5	100	100	ENSMUST00000107847.10	ENSMUSG00000028478.19	Clta	chr4	protein_coding	clathrin, light polypeptide (Lca)
chr4	44030268;44031435	44031400;44032401	+	44030268	44032401	cassetteExon	0.5	100	100	ENSMUST00000107849.10	ENSMUSG00000028478.19	Clta	chr4	protein_coding	clathrin, light polypeptide (Lca)
chr4	44040436	44042163	-	44040436;44041884	44041663;44042163	ES	0.33	50	50	ENSMUST00000030201.14	ENSMUSG00000028479.19	Gne	chr4	protein_coding	glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
chr4	44055357	44066755	-	44055357;44060227	44059776;44066755	ES	0.33	50	50	ENSMUST00000030201.14	ENSMUSG00000028479.19	Gne	chr4	protein_coding	glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
chr4	44060227;44063146	44063087;44066755	-	44060227	44066755	cassetteExon	0.5	100	100	ENSMUST00000030201.14	ENSMUSG00000028479.19	Gne	chr4	protein_coding	glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
chr4	44041889	44042163	-	44041884	44042163	A3SS	0.33	50	50	ENSMUST00000030201.14	ENSMUSG00000028479.19	Gne	chr4	protein_coding	glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
chr4	44052979	44055205	-	44052983	44055205	A3SS	0.5	50	50	ENSMUST00000030201.14	ENSMUSG00000028479.19	Gne	chr4	protein_coding	glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
chr4	44066960	44072362	-	44066960	44084048	A5SS	0.2	50	50	ENSMUST00000030201.14	ENSMUSG00000028479.19	Gne	chr4	protein_coding	glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
chr4	44066960	44072388	-	44066960	44084048	A5SS	0.2	50	50	ENSMUST00000030201.14	ENSMUSG00000028479.19	Gne	chr4	protein_coding	glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
chr4	44066960	44072830	-	44066960	44084048	A5SS	0.2	50	50	ENSMUST00000030201.14	ENSMUSG00000028479.19	Gne	chr4	protein_coding	glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
chr4	44066960	44083825	-	44066960	44084048	A5SS	0.2	50	50	ENSMUST00000030201.14	ENSMUSG00000028479.19	Gne	chr4	protein_coding	glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
chr4	44066960	44072830	-	44066960	44072362	5pMXE	0.2	50	50	ENSMUST00000102936.9	ENSMUSG00000028479.19	Gne	chr4	protein_coding	glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
chr4	44066960	44083825	-	44066960	44072362	5pMXE	0.2	50	50	ENSMUST00000102936.9	ENSMUSG00000028479.19	Gne	chr4	protein_coding	glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
chr4	44066960	44072388	-	44066960	44072362	A5SS	0.2	50	50	ENSMUST00000102936.9	ENSMUSG00000028479.19	Gne	chr4	protein_coding	glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
chr4	44040436	44042163	-	44040436;44041889	44041663;44042163	ES	0.33	50	50	ENSMUST00000172533.8	ENSMUSG00000028479.19	Gne	chr4	protein_coding	glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
chr4	44063146	44066755	-	44055357	44066755	A3SS	0.33	50	50	ENSMUST00000133709.8	ENSMUSG00000028479.19	Gne	chr4	protein_coding	glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
chr4	44060227	44066755	-	44060227	44063087	5pMXE	0.5	50	50	ENSMUST00000173976.2	ENSMUSG00000028479.19	Gne	chr4	protein_coding	glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
chr4	44055357	44066755	-	44060227	44066755	3pMXE	0.33	50	50	ENSMUST00000172514.8	ENSMUSG00000028479.19	Gne	chr4	protein_coding	glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
chr4	44066960	44072388	-	44066960	44083825	A5SS	0.2	50	50	ENSMUST00000144985.8	ENSMUSG00000028479.19	Gne	chr4	protein_coding	glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
chr4	44066960	44072830	-	44066960	44083825	A5SS	0.2	50	50	ENSMUST00000144985.8	ENSMUSG00000028479.19	Gne	chr4	protein_coding	glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
chr4	44066960	44072830	-	44066960	44072388	5pMXE	0.2	50	50	ENSMUST00000173383.2	ENSMUSG00000028479.19	Gne	chr4	protein_coding	glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
chr4	44131643	44134890	-	44131643;44133761	44133640;44134890	ES	0.5	50	50	ENSMUST00000098098.9	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44167627	-	44152553	44167318	5pMXE	0.11	50	50	ENSMUST00000098098.9	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44168243	-	44152553	44167318	5pMXE	0.11	50	50	ENSMUST00000098098.9	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44187355	-	44152553	44167318	5pMXE	0.11	50	50	ENSMUST00000098098.9	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553;44159052	44158903;44167318	-	44152553	44167318	cassetteExon	0.5	100	100	ENSMUST00000098098.9	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553;44159052	44158990;44167318	-	44152553	44167318	cassetteExon	0.5	100	100	ENSMUST00000098098.9	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553;44159052	44159005;44167318	-	44152553	44167318	cassetteExon	0.5	100	100	ENSMUST00000098098.9	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44138831	44139472	-	44138831	44142295	A5SS	0.5	50	50	ENSMUST00000098098.9	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44154641	-	44152553	44167318	A5SS	0.11	50	50	ENSMUST00000098098.9	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44167466	-	44152553	44167318	A5SS	0.11	50	50	ENSMUST00000098098.9	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44167627	-	44152553;44159052	44158903;44167627	ES	0.5	50	50	ENSMUST00000102934.9	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44159052	44168243	-	44159052	44167627	5pMXE	0.2	50	50	ENSMUST00000102934.9	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44159052	44187449	-	44159052	44167627	5pMXE	0.2	50	50	ENSMUST00000102934.9	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553;44154733	44154641;44158903	-	44152553	44158903	cassetteExon	0.5	100	100	ENSMUST00000102934.9	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44158990	-	44152553	44158903	A5SS	0.14	50	50	ENSMUST00000102934.9	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44159005	-	44152553	44158903	A5SS	0.14	50	50	ENSMUST00000102934.9	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44167318	-	44152553	44158903	A5SS&ES	0.14	50	50	ENSMUST00000102934.9	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44167466	-	44152553	44158903	A5SS&ES	0.14	50	50	ENSMUST00000102934.9	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44159052	44167318	-	44159052	44167627	A5SS	0.2	50	50	ENSMUST00000102934.9	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44159052	44167466	-	44159052	44167627	A5SS	0.2	50	50	ENSMUST00000102934.9	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44168243	-	44152553;44159052	44158903;44168243	ES	0.33	50	50	ENSMUST00000045793.15	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44159052	44187449	-	44159052	44168243	5pMXE	0.2	50	50	ENSMUST00000045793.15	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44159054	44168243	-	44159052	44168243	A3SS	0.33	50	50	ENSMUST00000045793.15	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44167627	-	44152553	44158903	A5SS&ES	0.12	50	50	ENSMUST00000045793.15	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44159052	44167318	-	44159052	44168243	A5SS	0.2	50	50	ENSMUST00000045793.15	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44159052	44167466	-	44159052	44168243	A5SS	0.2	50	50	ENSMUST00000045793.15	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44168243	-	44152553	44167466	5pMXE	0.11	50	50	ENSMUST00000136730.8	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44187355	-	44152553	44167466	5pMXE	0.11	50	50	ENSMUST00000136730.8	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553;44159052	44158903;44167466	-	44152553	44167466	cassetteExon	0.5	100	100	ENSMUST00000136730.8	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553;44159052	44158990;44167466	-	44152553	44167466	cassetteExon	0.5	100	100	ENSMUST00000136730.8	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553;44159052	44159005;44167466	-	44152553	44167466	cassetteExon	0.5	100	100	ENSMUST00000136730.8	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44154641	-	44152553	44167466	A5SS	0.11	50	50	ENSMUST00000136730.8	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44167627	-	44152553	44167466	A5SS	0.11	50	50	ENSMUST00000136730.8	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44187355	-	44152553	44168243	5pMXE	0.11	50	50	ENSMUST00000128426.8	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553;44159052	44158990;44168243	-	44152553	44168243	cassetteExon	0.5	100	100	ENSMUST00000128426.8	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553;44159052	44159005;44168243	-	44152553	44168243	cassetteExon	0.5	100	100	ENSMUST00000128426.8	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553;44159054	44158903;44168243	-	44152553	44168243	cassetteExon	0.5	100	100	ENSMUST00000128426.8	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553;44159054	44158990;44168243	-	44152553	44168243	cassetteExon	0.5	100	100	ENSMUST00000128426.8	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553;44159054	44159005;44168243	-	44152553	44168243	cassetteExon	0.5	100	100	ENSMUST00000128426.8	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44154641	-	44152553	44168243	A5SS	0.11	50	50	ENSMUST00000128426.8	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44167627	-	44152553	44168243	A5SS	0.11	50	50	ENSMUST00000128426.8	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44154641	-	44152553	44159005	A5SS	0.12	50	50	ENSMUST00000145760.8	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44158990	-	44152553	44159005	A5SS	0.12	50	50	ENSMUST00000145760.8	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44167318	-	44152553	44159005	A5SS&ES	0.12	50	50	ENSMUST00000145760.8	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44167466	-	44152553	44159005	A5SS&ES	0.12	50	50	ENSMUST00000145760.8	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44167627	-	44152553	44159005	A5SS&ES	0.12	50	50	ENSMUST00000145760.8	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44187355	-	44152553	44167627	5pMXE	0.11	50	50	ENSMUST00000143337.2	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553;44159052	44158990;44167627	-	44152553	44167627	cassetteExon	0.5	100	100	ENSMUST00000143337.2	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553;44159052	44159005;44167627	-	44152553	44167627	cassetteExon	0.5	100	100	ENSMUST00000143337.2	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44154641	-	44152553	44167627	A5SS	0.11	50	50	ENSMUST00000143337.2	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44159052	44187449	-	44159052	44167466	5pMXE	0.2	50	50	ENSMUST00000137194.8	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44159052	44167318	-	44159052	44167466	A5SS	0.2	50	50	ENSMUST00000137194.8	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44187519	44233543	-	44187519	44228250	5pMXE	0.5	50	50	ENSMUST00000123844.8	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44154641	-	44152553	44187355	A5SS	0.11	50	50	ENSMUST00000123844.8	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44158903	-	44152553	44187355	A5SS	0.11	50	50	ENSMUST00000123844.8	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44158990	-	44152553	44187355	A5SS	0.11	50	50	ENSMUST00000123844.8	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44159005	-	44152553	44187355	A5SS	0.11	50	50	ENSMUST00000123844.8	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44154641	-	44152553	44158990	A5SS	0.14	50	50	ENSMUST00000129621.2	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44167318	-	44152553	44158990	A5SS&ES	0.14	50	50	ENSMUST00000129621.2	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44167466	-	44152553	44158990	A5SS&ES	0.14	50	50	ENSMUST00000129621.2	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44168243	-	44152553	44158903	A5SS&ES	0.11	50	50	ENSMUST00000153116.2	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44159052	44167318	-	44159052	44187449	A5SS	0.2	50	50	ENSMUST00000153116.2	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44152553	44167318	-	44159052	44167318	3pMXE	0.5	50	50	ENSMUST00000147302.2	ENSMUSG00000035696.16	Rnf38	chr4	protein_coding	ring finger protein 38
chr4	44303666	44306990	+	44303666;44306117	44306032;44306990	ES	0.5	50	50	ENSMUST00000045607.12	ENSMUSG00000035683.14	Melk	chr4	protein_coding	maternal embryonic leucine zipper kinase
chr4	44307106	44310290	+	44307106;44309049	44308906;44310290	ES	0.5	50	50	ENSMUST00000045607.12	ENSMUSG00000035683.14	Melk	chr4	protein_coding	maternal embryonic leucine zipper kinase
chr4	44307106	44308948	+	44307106	44308906	A3SS	0.25	50	50	ENSMUST00000045607.12	ENSMUSG00000035683.14	Melk	chr4	protein_coding	maternal embryonic leucine zipper kinase
chr4	44302680	44303571	+	44301072	44303571	A5SS	0.5	50	50	ENSMUST00000045607.12	ENSMUSG00000035683.14	Melk	chr4	protein_coding	maternal embryonic leucine zipper kinase
chr4	44307106	44312164	+	44307106;44310358	44310290;44312164	ES	0.5	50	50	ENSMUST00000137703.8	ENSMUSG00000035683.14	Melk	chr4	protein_coding	maternal embryonic leucine zipper kinase
chr4	44307106;44309049	44308948;44310290	+	44307106	44310290	cassetteExon	0.5	100	100	ENSMUST00000137703.8	ENSMUSG00000035683.14	Melk	chr4	protein_coding	maternal embryonic leucine zipper kinase
chr4	44307106	44308906	+	44307106	44312164	A3SS	0.25	50	50	ENSMUST00000125708.2	ENSMUSG00000035683.14	Melk	chr4	protein_coding	maternal embryonic leucine zipper kinase
chr4	44307106	44308948	+	44307106	44312164	A3SS	0.25	50	50	ENSMUST00000125708.2	ENSMUSG00000035683.14	Melk	chr4	protein_coding	maternal embryonic leucine zipper kinase
chr4	44531582	44570002	-	44531582;44537506	44537420;44570002	ES	0.5	50	50	ENSMUST00000014174.14	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44537506	44609715	-	44537506;44570103	44570002;44609715	ES	0.33	50	50	ENSMUST00000014174.14	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44570103	44645548	-	44570103;44609844	44609715;44645548	ES	0.2	50	50	ENSMUST00000014174.14	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44645723	44682669	-	44645723;44679568	44679440;44682669	ES	0.5	50	50	ENSMUST00000014174.14	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44679568	44691835	-	44679568;44682733	44682669;44691835	ES	0.5	50	50	ENSMUST00000014174.14	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44682733	44697522	-	44682733;44692032	44691835;44697522	ES	0.33	50	50	ENSMUST00000014174.14	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44692032	44710363	-	44692032;44697687	44697522;44710363	ES	0.5	50	50	ENSMUST00000014174.14	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44570103;44615616	44615560;44645548	-	44570103;44609844	44609715;44645548	MXE	0.5	100	100	ENSMUST00000014174.14	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44609844;44615616	44615560;44645548	-	44609844	44645548	cassetteExon	0.5	100	100	ENSMUST00000014174.14	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44682733	44683691	-	44682733	44691835	A5SS	0.25	50	50	ENSMUST00000014174.14	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44682733	44703371	-	44682733	44691835	A5SS&ES	0.25	50	50	ENSMUST00000014174.14	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44692032	44703371	-	44692032	44697522	A5SS&ES	0.33	50	50	ENSMUST00000014174.14	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44697687	44703371	-	44697687	44710363	A5SS	0.5	50	50	ENSMUST00000014174.14	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44537506	44645548	-	44537506;44570103	44570002;44645548	ES	0.2	50	50	ENSMUST00000143235.8	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44531582;44609844	44609715;44645548	-	44531582;44570103	44537420;44645548	MXE	0.5	100	100	ENSMUST00000143235.8	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44537506;44609844	44609715;44645548	-	44537506;44570103	44570002;44645548	MXE	0.5	100	100	ENSMUST00000143235.8	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44570103;44615616	44615560;44645548	-	44570103	44645548	cassetteExon	0.5	100	100	ENSMUST00000143235.8	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44531582	44609715	-	44531582;44537506	44537420;44609715	ES	0.33	50	50	ENSMUST00000107825.9	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44537506	44645548	-	44537506;44609844	44609715;44645548	ES	0.2	50	50	ENSMUST00000107825.9	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44531582;44570103	44570002;44609715	-	44531582;44537506	44537420;44609715	MXE	0.5	100	100	ENSMUST00000107825.9	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44531582;44570103	44570002;44645548	-	44531582;44609844	44537420;44645548	MXE	0.5	100	100	ENSMUST00000107825.9	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44531582	44609715	-	44531582;44570103	44570002;44609715	ES	0.33	50	50	ENSMUST00000102932.10	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44531582;44537506	44537420;44645548	-	44531582;44609844	44570002;44645548	MXE	0.5	100	100	ENSMUST00000102932.10	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44531582	44645548	-	44531582;44537506	44537420;44645548	ES	0.2	50	50	ENSMUST00000107827.9	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44531582;44570103	44570002;44645548	-	44531582;44537506	44537420;44645548	MXE	0.5	100	100	ENSMUST00000107827.9	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44531582;44609844	44609715;44645548	-	44531582;44537506	44537420;44645548	MXE	0.5	100	100	ENSMUST00000107827.9	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44615616	44645548	-	44537506	44645548	A3SS	0.2	50	50	ENSMUST00000107827.9	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44531582;44570103	44570002;44645548	-	44531582	44645548	cassetteExon	0.5	100	100	ENSMUST00000107826.9	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44531582;44609844	44609715;44645548	-	44531582	44645548	cassetteExon	0.5	100	100	ENSMUST00000107826.9	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44615616	44645548	-	44531582	44645548	A3SS	0.2	50	50	ENSMUST00000107826.9	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44645723;44679568	44679440;44691835	-	44645723;44682733	44682669;44691835	MXE	0.5	100	100	ENSMUST00000134968.9	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44645723;44679568	44679440;44697522	-	44645723;44692032	44682669;44697522	MXE	0.5	100	100	ENSMUST00000134968.9	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44531582;44570103	44570002;44645548	-	44531582;44609844	44609715;44645548	MXE	0.5	100	100	ENSMUST00000173821.8	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44679568;44697687	44697522;44710363	-	44679568;44692032	44682669;44710363	MXE	0.5	100	100	ENSMUST00000174319.8	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44682733;44697687	44697522;44710363	-	44682733;44692032	44691835;44710363	MXE	0.5	100	100	ENSMUST00000174319.8	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44692032	44703371	-	44692032	44710363	A5SS	0.33	50	50	ENSMUST00000174319.8	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44679568	44697522	-	44679568;44682733	44682669;44697522	ES	0.33	50	50	ENSMUST00000173733.8	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44679568;44692032	44691835;44697522	-	44679568;44682733	44682669;44697522	MXE	0.5	100	100	ENSMUST00000173733.8	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44679568;44692032	44691835;44710363	-	44679568;44697687	44682669;44710363	MXE	0.5	100	100	ENSMUST00000173733.8	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44682733	44683691	-	44682733	44697522	A5SS	0.25	50	50	ENSMUST00000173733.8	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44682733	44703371	-	44682733	44697522	A5SS&ES	0.25	50	50	ENSMUST00000173733.8	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44531582;44609844	44609715;44615560	-	44531582;44570103	44537420;44615560	MXE	0.5	100	100	ENSMUST00000174242.8	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44537506;44609844	44609715;44615560	-	44537506;44570103	44570002;44615560	MXE	0.5	100	100	ENSMUST00000174242.8	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44570103;44609844	44609715;44615560	-	44570103	44615560	cassetteExon	0.5	100	100	ENSMUST00000174242.8	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44531582;44609844	44609715;44645548	-	44531582;44615616	44537420;44645548	MXE	0.5	100	100	ENSMUST00000174242.8	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44537506;44609844	44609715;44645548	-	44537506;44615616	44570002;44645548	MXE	0.5	100	100	ENSMUST00000174242.8	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44531582	44609715	-	44570103	44609715	3pMXE	0.33	50	50	ENSMUST00000172949.8	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44537506	44609715	-	44570103	44609715	3pMXE	0.33	50	50	ENSMUST00000172949.8	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44682733	44703371	-	44682733	44683691	5pMXE	0.25	50	50	ENSMUST00000172949.8	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44645723	44682669	-	44679568	44682669	3pMXE	0.5	50	50	ENSMUST00000146335.8	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44692032	44703371	-	44692032;44697687	44697522;44703371	ES	0.33	50	50	ENSMUST00000146335.8	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44682733	44703371	-	44682733;44692032	44691835;44703371	ES	0.33	50	50	ENSMUST00000187197.7	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44679568;44697687	44697522;44703371	-	44679568;44692032	44682669;44703371	MXE	0.5	100	100	ENSMUST00000187197.7	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44682733;44697687	44697522;44703371	-	44682733;44692032	44691835;44703371	MXE	0.5	100	100	ENSMUST00000187197.7	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44679568;44682733	44682669;44703371	-	44679568;44697687	44697522;44703371	MXE	0.5	100	100	ENSMUST00000186542.2	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44679568;44692032	44691835;44697522	-	44679568	44697522	cassetteExon	0.5	100	100	ENSMUST00000186542.2	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44679568;44692032	44691835;44703371	-	44679568;44697687	44697522;44703371	MXE	0.5	100	100	ENSMUST00000186542.2	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44679568;44682733	44682669;44703371	-	44679568;44692032	44691835;44703371	MXE	0.5	100	100	ENSMUST00000174761.8	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44682733;44697687	44697522;44703371	-	44682733	44703371	cassetteExon	0.5	100	100	ENSMUST00000191036.2	ENSMUSG00000014030.16	Pax5	chr4	protein_coding	paired box 5
chr4	44756692	44761850	+	44756034	44761850	A5SS	0.25	50	50	ENSMUST00000154121.2	ENSMUSG00000035649.18	Zcchc7	chr4	protein_coding	zinc finger, CCHC domain containing 7
chr4	44756696	44761850	+	44756034	44761850	A5SS	0.25	50	50	ENSMUST00000154121.2	ENSMUSG00000035649.18	Zcchc7	chr4	protein_coding	zinc finger, CCHC domain containing 7
chr4	44760583	44761850	+	44756034	44761850	A5SS	0.25	50	50	ENSMUST00000154121.2	ENSMUSG00000035649.18	Zcchc7	chr4	protein_coding	zinc finger, CCHC domain containing 7
chr4	44762474;44763290	44763115;44893533	+	44762474	44893533	cassetteExon	0.5	100	100	ENSMUST00000107824.9	ENSMUSG00000035649.18	Zcchc7	chr4	protein_coding	zinc finger, CCHC domain containing 7
chr4	44929235;44929645	44929581;44931036	+	44929235	44931036	cassetteExon	0.5	100	100	ENSMUST00000107824.9	ENSMUSG00000035649.18	Zcchc7	chr4	protein_coding	zinc finger, CCHC domain containing 7
chr4	44756696	44761850	+	44756692	44761850	A5SS	0.25	50	50	ENSMUST00000107824.9	ENSMUSG00000035649.18	Zcchc7	chr4	protein_coding	zinc finger, CCHC domain containing 7
chr4	44760583	44761850	+	44756692	44761850	A5SS	0.25	50	50	ENSMUST00000107824.9	ENSMUSG00000035649.18	Zcchc7	chr4	protein_coding	zinc finger, CCHC domain containing 7
chr4	44907325	44908451	+	44895989	44908451	A5SS	0.5	50	50	ENSMUST00000107824.9	ENSMUSG00000035649.18	Zcchc7	chr4	protein_coding	zinc finger, CCHC domain containing 7
chr4	44760583	44761850	+	44756696	44761850	A5SS	0.25	50	50	ENSMUST00000143385.2	ENSMUSG00000035649.18	Zcchc7	chr4	protein_coding	zinc finger, CCHC domain containing 7
chr4	44986390;44986926	44986764;44987216	+	44986390	44987216	cassetteExon	0.5	100	100	ENSMUST00000045078.13	ENSMUSG00000035637.15	Grhpr	chr4	protein_coding	glyoxylate reductase/hydroxypyruvate reductase
chr4	44985395	44986291	+	44985395	44986286	A3SS	0.5	50	50	ENSMUST00000045078.13	ENSMUSG00000035637.15	Grhpr	chr4	protein_coding	glyoxylate reductase/hydroxypyruvate reductase
chr4	44981506	44982879	+	44981534	44982879	A5SS	0.25	50	50	ENSMUST00000045078.13	ENSMUSG00000035637.15	Grhpr	chr4	protein_coding	glyoxylate reductase/hydroxypyruvate reductase
chr4	44981506	44983874	+	44983009	44983874	A5SS&ES	0.5	50	50	ENSMUST00000045078.13	ENSMUSG00000035637.15	Grhpr	chr4	protein_coding	glyoxylate reductase/hydroxypyruvate reductase
chr4	44981550	44982879	+	44981534	44982879	A5SS	0.25	50	50	ENSMUST00000045078.13	ENSMUSG00000035637.15	Grhpr	chr4	protein_coding	glyoxylate reductase/hydroxypyruvate reductase
chr4	44981694	44982879	+	44981534	44982879	A5SS	0.25	50	50	ENSMUST00000045078.13	ENSMUSG00000035637.15	Grhpr	chr4	protein_coding	glyoxylate reductase/hydroxypyruvate reductase
chr4	44981506	44982879	+	44981550	44982879	A5SS	0.25	50	50	ENSMUST00000128973.2	ENSMUSG00000035637.15	Grhpr	chr4	protein_coding	glyoxylate reductase/hydroxypyruvate reductase
chr4	44981694	44982879	+	44981550	44982879	A5SS	0.25	50	50	ENSMUST00000128973.2	ENSMUSG00000035637.15	Grhpr	chr4	protein_coding	glyoxylate reductase/hydroxypyruvate reductase
chr4	44981506;44983009	44982879;44983874	+	44981506	44983874	cassetteExon	0.5	100	100	ENSMUST00000151148.8	ENSMUSG00000035637.15	Grhpr	chr4	protein_coding	glyoxylate reductase/hydroxypyruvate reductase
chr4	44981694	44982879	+	44981506	44982879	A5SS	0.25	50	50	ENSMUST00000150394.8	ENSMUSG00000035637.15	Grhpr	chr4	protein_coding	glyoxylate reductase/hydroxypyruvate reductase
chr4	44995386	45010952	-	44995386	45012224	A5SS	0.33	50	50	ENSMUST00000055028.9	ENSMUSG00000049657.10	Zbtb5	chr4	protein_coding	zinc finger and BTB domain containing 5
chr4	44995386	45011847	-	44995386	45012224	A5SS	0.33	50	50	ENSMUST00000055028.9	ENSMUSG00000049657.10	Zbtb5	chr4	protein_coding	zinc finger and BTB domain containing 5
chr4	44995386	45010952	-	44995386	45011847	A5SS	0.33	50	50	ENSMUST00000180217.2	ENSMUSG00000049657.10	Zbtb5	chr4	protein_coding	zinc finger and BTB domain containing 5
chr4	45031498	45036250	+	45031498	45031941	3pMXE	0.5	50	50	ENSMUST00000133157.8	ENSMUSG00000028318.15	Polr1e	chr4	protein_coding	polymerase (RNA) I polypeptide E
chr4	45019377;45019667	45019555;45022208	+	45019377	45022208	cassetteExon	0.5	100	100	ENSMUST00000133157.8	ENSMUSG00000028318.15	Polr1e	chr4	protein_coding	polymerase (RNA) I polypeptide E
chr4	45023278	45024479	+	45023278	45025770	A3SS	0.5	50	50	ENSMUST00000133157.8	ENSMUSG00000028318.15	Polr1e	chr4	protein_coding	polymerase (RNA) I polypeptide E
chr4	45025218	45025770	+	45023278	45025770	A5SS	0.5	50	50	ENSMUST00000133157.8	ENSMUSG00000028318.15	Polr1e	chr4	protein_coding	polymerase (RNA) I polypeptide E
chr4	45048576	45058329	-	45048576;45051702	45051553;45058329	ES	0.5	50	50	ENSMUST00000052236.13	ENSMUSG00000048232.13	Fbxo10	chr4	protein_coding	F-box protein 10
chr4	45035320	45040526	-	45036082	45040526	A3SS	0.5	50	50	ENSMUST00000052236.13	ENSMUSG00000048232.13	Fbxo10	chr4	protein_coding	F-box protein 10
chr4	45105644;45106793	45106615;45107913	-	45105644	45107913	cassetteExon	0.5	100	100	ENSMUST00000107810.3	ENSMUSG00000078713.9	Tomm5	chr4	protein_coding	translocase of outer mitochondrial membrane 5
chr4	45105644;45106888	45106615;45107913	-	45105644	45107913	cassetteExon	0.5	100	100	ENSMUST00000107810.3	ENSMUSG00000078713.9	Tomm5	chr4	protein_coding	translocase of outer mitochondrial membrane 5
chr4	45105644;45106888	45106839;45107913	-	45105644	45107913	cassetteExon	0.5	100	100	ENSMUST00000107810.3	ENSMUSG00000078713.9	Tomm5	chr4	protein_coding	translocase of outer mitochondrial membrane 5
chr4	45105644	45107917	-	45105644	45107913	A5SS	0.25	50	50	ENSMUST00000107810.3	ENSMUSG00000078713.9	Tomm5	chr4	protein_coding	translocase of outer mitochondrial membrane 5
chr4	45105644;45106888	45106839;45107913	-	45105644;45106793	45106615;45107913	MXE	0.5	100	100	ENSMUST00000107809.9	ENSMUSG00000078713.9	Tomm5	chr4	protein_coding	translocase of outer mitochondrial membrane 5
chr4	45105644	45107917	-	45105644	45106615	A5SS&ES	0.25	50	50	ENSMUST00000107809.9	ENSMUSG00000078713.9	Tomm5	chr4	protein_coding	translocase of outer mitochondrial membrane 5
chr4	45105644	45107917	-	45105644	45106839	A5SS&ES	0.25	50	50	ENSMUST00000107808.3	ENSMUSG00000078713.9	Tomm5	chr4	protein_coding	translocase of outer mitochondrial membrane 5
chr4	45204405	45229831	+	45184957	45229831	A5SS	0.5	50	50	ENSMUST00000134280.8	ENSMUSG00000035615.13	Frmpd1	chr4	protein_coding	FERM and PDZ domain containing 1
chr4	45300627	45304264	+	45300627;45301350	45301236;45304264	ES	0.33	50	50	ENSMUST00000044673.9	ENSMUSG00000035601.10	Trmt10b	chr4	protein_coding	tRNA methyltransferase 10B
chr4	45297195;45299897	45299747;45300417	+	45297195	45300417	cassetteExon	0.5	100	100	ENSMUST00000044673.9	ENSMUSG00000035601.10	Trmt10b	chr4	protein_coding	tRNA methyltransferase 10B
chr4	45300627	45301202	+	45300627	45301236	A3SS	0.25	50	50	ENSMUST00000044673.9	ENSMUSG00000035601.10	Trmt10b	chr4	protein_coding	tRNA methyltransferase 10B
chr4	45300627	45301225	+	45300627	45301236	A3SS	0.25	50	50	ENSMUST00000044673.9	ENSMUSG00000035601.10	Trmt10b	chr4	protein_coding	tRNA methyltransferase 10B
chr4	45307970	45308450	+	45307970	45308497	A3SS	0.5	50	50	ENSMUST00000044673.9	ENSMUSG00000035601.10	Trmt10b	chr4	protein_coding	tRNA methyltransferase 10B
chr4	45301344	45304264	+	45301350	45304264	A5SS	0.33	50	50	ENSMUST00000044673.9	ENSMUSG00000035601.10	Trmt10b	chr4	protein_coding	tRNA methyltransferase 10B
chr4	45300627	45304264	+	45300627;45301344	45301225;45304264	ES	0.33	50	50	ENSMUST00000141659.8	ENSMUSG00000035601.10	Trmt10b	chr4	protein_coding	tRNA methyltransferase 10B
chr4	45300627	45301202	+	45300627	45301225	A3SS	0.25	50	50	ENSMUST00000141659.8	ENSMUSG00000035601.10	Trmt10b	chr4	protein_coding	tRNA methyltransferase 10B
chr4	45300627	45304264	+	45300627;45301344	45301202;45304264	ES	0.33	50	50	ENSMUST00000142785.8	ENSMUSG00000035601.10	Trmt10b	chr4	protein_coding	tRNA methyltransferase 10B
chr4	45300627	45304264	+	45300627;45301344	45301236;45304264	ES	0.33	50	50	ENSMUST00000107800.3	ENSMUSG00000035601.10	Trmt10b	chr4	protein_coding	tRNA methyltransferase 10B
chr4	45300627;45301350	45301202;45304264	+	45300627	45304264	cassetteExon	0.5	100	100	ENSMUST00000126972.2	ENSMUSG00000035601.10	Trmt10b	chr4	protein_coding	tRNA methyltransferase 10B
chr4	45300627;45301350	45301225;45304264	+	45300627	45304264	cassetteExon	0.5	100	100	ENSMUST00000126972.2	ENSMUSG00000035601.10	Trmt10b	chr4	protein_coding	tRNA methyltransferase 10B
chr4	45317028	45319550	-	45317028;45317829	45317678;45319550	ES	0.5	50	50	ENSMUST00000030003.10	ENSMUSG00000028322.12	Exosc3	chr4	protein_coding	exosome component 3
chr4	45319699	45342675	-	45319699	45320271	5pMXE	0.5	50	50	ENSMUST00000030003.10	ENSMUSG00000028322.12	Exosc3	chr4	protein_coding	exosome component 3
chr4	45317028	45319550	-	45317829	45319550	3pMXE	0.5	50	50	ENSMUST00000130843.2	ENSMUSG00000028322.12	Exosc3	chr4	protein_coding	exosome component 3
chr4	45348219	45370306	+	45348219;45359958	45359761;45370306	ES	0.5	50	50	ENSMUST00000155551.8	ENSMUSG00000035572.17	Dcaf10	chr4	protein_coding	DDB1 and CUL4 associated factor 10
chr4	45370508	45372924	+	45370508;45372774	45372664;45372924	ES	0.5	50	50	ENSMUST00000155551.8	ENSMUSG00000035572.17	Dcaf10	chr4	protein_coding	DDB1 and CUL4 associated factor 10
chr4	45348219;45349591	45349537;45359761	+	45348219	45359761	cassetteExon	0.5	100	100	ENSMUST00000155551.8	ENSMUSG00000035572.17	Dcaf10	chr4	protein_coding	DDB1 and CUL4 associated factor 10
chr4	45348219	45349537	+	45348219	45370306	A3SS	0.33	50	50	ENSMUST00000130821.8	ENSMUSG00000035572.17	Dcaf10	chr4	protein_coding	DDB1 and CUL4 associated factor 10
chr4	45400179	45408695	-	45400179;45404835	45404727;45408695	ES	0.33	50	50	ENSMUST00000107796.8	ENSMUSG00000045973.19	Slc25a51	chr4	protein_coding	solute carrier family 25, member 51
chr4	45408152	45408695	-	45404835	45408695	A3SS	0.33	50	50	ENSMUST00000107796.8	ENSMUSG00000045973.19	Slc25a51	chr4	protein_coding	solute carrier family 25, member 51
chr4	45404835	45408587	-	45404835	45408695	A5SS	0.5	50	50	ENSMUST00000107796.8	ENSMUSG00000045973.19	Slc25a51	chr4	protein_coding	solute carrier family 25, member 51
chr4	45408152	45408695	-	45400179	45408695	A3SS	0.33	50	50	ENSMUST00000132815.3	ENSMUSG00000045973.19	Slc25a51	chr4	protein_coding	solute carrier family 25, member 51
chr4	45400179	45408695	-	45400179	45404727	5pMXE	0.5	50	50	ENSMUST00000151516.2	ENSMUSG00000045973.19	Slc25a51	chr4	protein_coding	solute carrier family 25, member 51
chr4	45458342	45489055	-	45458342	45482548	5pMXE	0.5	50	50	ENSMUST00000147926.8	ENSMUSG00000044813.16	Shb	chr4	protein_coding	src homology 2 domain-containing transforming protein B
chr4	45489175	45532247	-	45489175	45529562	5pMXE	0.25	50	50	ENSMUST00000061986.12	ENSMUSG00000044813.16	Shb	chr4	protein_coding	src homology 2 domain-containing transforming protein B
chr4	45489175	45489671	-	45489175	45529562	A5SS	0.25	50	50	ENSMUST00000061986.12	ENSMUSG00000044813.16	Shb	chr4	protein_coding	src homology 2 domain-containing transforming protein B
chr4	45489175	45492718	-	45489175	45529562	A5SS	0.25	50	50	ENSMUST00000061986.12	ENSMUSG00000044813.16	Shb	chr4	protein_coding	src homology 2 domain-containing transforming protein B
chr4	45489175	45532247	-	45489175	45492718	5pMXE	0.25	50	50	ENSMUST00000130107.8	ENSMUSG00000044813.16	Shb	chr4	protein_coding	src homology 2 domain-containing transforming protein B
chr4	45489175	45489671	-	45489175	45492718	A5SS	0.25	50	50	ENSMUST00000130107.8	ENSMUSG00000044813.16	Shb	chr4	protein_coding	src homology 2 domain-containing transforming protein B
chr4	45489175	45532247	-	45489175	45489671	5pMXE	0.25	50	50	ENSMUST00000146236.8	ENSMUSG00000044813.16	Shb	chr4	protein_coding	src homology 2 domain-containing transforming protein B
chr4	45640997	45645140	+	45640997;45642422	45641623;45645140	ES	0.33	50	50	ENSMUST00000211577.2	ENSMUSG00000085980.3	Gm12408	chr4	lncRNA	predicted gene 12408
chr4	45640997	45641626	+	45640997	45641623	A3SS	0.33	50	50	ENSMUST00000211577.2	ENSMUSG00000085980.3	Gm12408	chr4	lncRNA	predicted gene 12408
chr4	45640101	45640850	+	45639820	45640850	A5SS	0.33	50	50	ENSMUST00000211577.2	ENSMUSG00000085980.3	Gm12408	chr4	lncRNA	predicted gene 12408
chr4	45640700	45640850	+	45639820	45640850	A5SS	0.33	50	50	ENSMUST00000211577.2	ENSMUSG00000085980.3	Gm12408	chr4	lncRNA	predicted gene 12408
chr4	45642024	45645140	+	45642422	45645140	A5SS	0.33	50	50	ENSMUST00000211577.2	ENSMUSG00000085980.3	Gm12408	chr4	lncRNA	predicted gene 12408
chr4	45640997	45645140	+	45640997	45641626	3pMXE	0.33	50	50	ENSMUST00000210118.2	ENSMUSG00000085980.3	Gm12408	chr4	lncRNA	predicted gene 12408
chr4	45640997	45645140	+	45640997;45642024	45641623;45645140	ES	0.33	50	50	ENSMUST00000209349.2	ENSMUSG00000085980.3	Gm12408	chr4	lncRNA	predicted gene 12408
chr4	45640997;45642024	45641626;45645140	+	45640997	45645140	cassetteExon	0.5	100	100	ENSMUST00000209462.2	ENSMUSG00000085980.3	Gm12408	chr4	lncRNA	predicted gene 12408
chr4	45640700	45640850	+	45640101	45640850	A5SS	0.33	50	50	ENSMUST00000209462.2	ENSMUSG00000085980.3	Gm12408	chr4	lncRNA	predicted gene 12408
chr4	45642422	45645140	+	45640997	45645140	A5SS	0.33	50	50	ENSMUST00000209462.2	ENSMUSG00000085980.3	Gm12408	chr4	lncRNA	predicted gene 12408
chr4	45640997	45645140	+	45640997	45641623	3pMXE	0.33	50	50	ENSMUST00000151883.2	ENSMUSG00000085980.3	Gm12408	chr4	lncRNA	predicted gene 12408
chr4	45683799	45718523	+	45683799	45692685	3pMXE	0.5	50	50	ENSMUST00000123741.2	ENSMUSG00000073860.13	Gm829	chr4	lncRNA	predicted gene 829
chr4	45799169	45802463	+	45799169	45802455	A3SS	0.5	50	50	ENSMUST00000044384.5	ENSMUSG00000035561.6	Aldh1b1	chr4	protein_coding	aldehyde dehydrogenase 1 family, member B1
chr4	45849097;45853366	45853146;45858147	+	45849097	45858147	cassetteExon	0.5	100	100	ENSMUST00000107783.8	ENSMUSG00000028327.15	Stra6l	chr4	protein_coding	STRA6-like
chr4	45858222	45859971	+	45858222	45859936	A3SS	0.5	50	50	ENSMUST00000107783.8	ENSMUSG00000028327.15	Stra6l	chr4	protein_coding	STRA6-like
chr4	45855629	45858147	+	45849097	45858147	A5SS	0.33	50	50	ENSMUST00000107783.8	ENSMUSG00000028327.15	Stra6l	chr4	protein_coding	STRA6-like
chr4	45853366;45855629	45855375;45858147	+	45853366	45858147	cassetteExon	0.5	100	100	ENSMUST00000107782.8	ENSMUSG00000028327.15	Stra6l	chr4	protein_coding	STRA6-like
chr4	45849097	45858147	+	45853366	45858147	A5SS&ES	0.33	50	50	ENSMUST00000107782.8	ENSMUSG00000028327.15	Stra6l	chr4	protein_coding	STRA6-like
chr4	45916412	45917389	+	45916412	45923164	A3SS	0.5	50	50	ENSMUST00000149903.9	ENSMUSG00000035539.15	Ccdc180	chr4	protein_coding	coiled-coil domain containing 180
chr4	45922043	45923164	+	45916412	45923164	A5SS	0.5	50	50	ENSMUST00000149903.9	ENSMUSG00000035539.15	Ccdc180	chr4	protein_coding	coiled-coil domain containing 180
chr4	45992270	46005117	+	45992270;45994524	45994307;46005117	ES	0.5	50	50	ENSMUST00000107777.9	ENSMUSG00000035517.18	Tdrd7	chr4	protein_coding	tudor domain containing 7
chr4	46026159	46034296	+	46026159;46029807	46029647;46034296	ES	0.5	50	50	ENSMUST00000107777.9	ENSMUSG00000035517.18	Tdrd7	chr4	protein_coding	tudor domain containing 7
chr4	45972436	45987462	+	45965476	45987462	A5SS	0.33	50	50	ENSMUST00000107777.9	ENSMUSG00000035517.18	Tdrd7	chr4	protein_coding	tudor domain containing 7
chr4	45972932	45987462	+	45965476	45987462	A5SS	0.33	50	50	ENSMUST00000107777.9	ENSMUSG00000035517.18	Tdrd7	chr4	protein_coding	tudor domain containing 7
chr4	45972932	45987462	+	45972436	45987462	A5SS	0.33	50	50	ENSMUST00000102929.2	ENSMUSG00000035517.18	Tdrd7	chr4	protein_coding	tudor domain containing 7
chr4	46039309	46078314	+	46039309;46061134	46060966;46078314	ES	0.33	50	50	ENSMUST00000107773.3	ENSMUSG00000028328.14	Tmod1	chr4	protein_coding	tropomodulin 1
chr4	46097078	46099391	+	46097078	46106870	A3SS	0.5	50	50	ENSMUST00000107773.3	ENSMUSG00000028328.14	Tmod1	chr4	protein_coding	tropomodulin 1
chr4	46077244	46078314	+	46061134	46078314	A5SS	0.33	50	50	ENSMUST00000107773.3	ENSMUSG00000028328.14	Tmod1	chr4	protein_coding	tropomodulin 1
chr4	46083073	46083544	+	46078470	46083544	A5SS	0.5	50	50	ENSMUST00000107773.3	ENSMUSG00000028328.14	Tmod1	chr4	protein_coding	tropomodulin 1
chr4	46100367	46106870	+	46097078	46106870	A5SS	0.5	50	50	ENSMUST00000107773.3	ENSMUSG00000028328.14	Tmod1	chr4	protein_coding	tropomodulin 1
chr4	46077244	46078314	+	46039309	46078314	A5SS	0.33	50	50	ENSMUST00000156200.8	ENSMUSG00000028328.14	Tmod1	chr4	protein_coding	tropomodulin 1
chr4	46135594	46138492	-	46135594	46138380	5pMXE	0.33	50	50	ENSMUST00000107772.8	ENSMUSG00000035495.16	Tstd2	chr4	protein_coding	thiosulfate sulfurtransferase (rhodanese)-like domain containing 2
chr4	46132156;46133655	46133382;46135387	-	46132156	46135387	cassetteExon	0.5	100	100	ENSMUST00000107772.8	ENSMUSG00000035495.16	Tstd2	chr4	protein_coding	thiosulfate sulfurtransferase (rhodanese)-like domain containing 2
chr4	46135594;46137428	46137321;46138380	-	46135594	46138380	cassetteExon	0.5	100	100	ENSMUST00000107772.8	ENSMUSG00000035495.16	Tstd2	chr4	protein_coding	thiosulfate sulfurtransferase (rhodanese)-like domain containing 2
chr4	46135591	46138380	-	46135594	46138380	A3SS	0.33	50	50	ENSMUST00000107772.8	ENSMUSG00000035495.16	Tstd2	chr4	protein_coding	thiosulfate sulfurtransferase (rhodanese)-like domain containing 2
chr4	46137428	46138380	-	46135591	46138380	A3SS	0.33	50	50	ENSMUST00000107770.2	ENSMUSG00000035495.16	Tstd2	chr4	protein_coding	thiosulfate sulfurtransferase (rhodanese)-like domain containing 2
chr4	46135591	46138204	-	46135591	46138380	A5SS	0.5	50	50	ENSMUST00000107770.2	ENSMUSG00000035495.16	Tstd2	chr4	protein_coding	thiosulfate sulfurtransferase (rhodanese)-like domain containing 2
chr4	46135594	46137321	-	46135594	46138492	A5SS	0.33	50	50	ENSMUST00000147837.8	ENSMUSG00000035495.16	Tstd2	chr4	protein_coding	thiosulfate sulfurtransferase (rhodanese)-like domain containing 2
chr4	46167395	46168509	+	46167395	46168451	A3SS	0.5	50	50	ENSMUST00000030014.9	ENSMUSG00000028330.9	Ncbp1	chr4	protein_coding	nuclear cap binding protein subunit 1
chr4	46175415	46183118	-	46155826	46183118	A3SS	0.33	50	50	ENSMUST00000058232.11	ENSMUSG00000028329.14	Xpa	chr4	protein_coding	xeroderma pigmentosum, complementation group A
chr4	46180398	46183118	-	46155826	46183118	A3SS	0.33	50	50	ENSMUST00000058232.11	ENSMUSG00000028329.14	Xpa	chr4	protein_coding	xeroderma pigmentosum, complementation group A
chr4	46183235	46184281	-	46183235	46184288	A5SS	0.5	50	50	ENSMUST00000058232.11	ENSMUSG00000028329.14	Xpa	chr4	protein_coding	xeroderma pigmentosum, complementation group A
chr4	46185696	46186484	-	46185696	46193050	A5SS	0.5	50	50	ENSMUST00000058232.11	ENSMUSG00000028329.14	Xpa	chr4	protein_coding	xeroderma pigmentosum, complementation group A
chr4	46175415	46183118	-	46175415;46180398	46180207;46183118	ES	0.5	50	50	ENSMUST00000132358.8	ENSMUSG00000028329.14	Xpa	chr4	protein_coding	xeroderma pigmentosum, complementation group A
chr4	46329822	46345414	-	46329822	46343339	5pMXE	0.5	50	50	ENSMUST00000123933.8	ENSMUSG00000087383.8	Gm12446	chr4	lncRNA	predicted gene 12446
chr4	46377248	46380093	-	46377248	46379985	A5SS	0.5	50	50	ENSMUST00000151903.8	ENSMUSG00000028331.13	Trmo	chr4	protein_coding	tRNA methyltransferase O
chr4	46387742	46389318	-	46387742	46389322	A5SS	0.5	50	50	ENSMUST00000151903.8	ENSMUSG00000028331.13	Trmo	chr4	protein_coding	tRNA methyltransferase O
chr4	46489490;46491213	46491143;46492706	+	46489490	46492706	cassetteExon	0.5	100	100	ENSMUST00000030018.5	ENSMUSG00000028334.11	Nans	chr4	protein_coding	N-acetylneuraminic acid synthase (sialic acid synthase)
chr4	46490100	46492706	+	46489490	46492706	A5SS	0.33	50	50	ENSMUST00000030018.5	ENSMUSG00000028334.11	Nans	chr4	protein_coding	N-acetylneuraminic acid synthase (sialic acid synthase)
chr4	46490100	46492706	+	46491213	46492706	A5SS&ES	0.33	50	50	ENSMUST00000150584.8	ENSMUSG00000028334.11	Nans	chr4	protein_coding	N-acetylneuraminic acid synthase (sialic acid synthase)
chr4	46495767;46522144	46521982;46523506	-	46495767;46510529	46510437;46523506	MXE	0.5	100	100	ENSMUST00000184112.8	ENSMUSG00000039853.19	Trim14	chr4	protein_coding	tripartite motif-containing 14
chr4	46510529;46522144	46521982;46523506	-	46510529	46523506	cassetteExon	0.5	100	100	ENSMUST00000184112.8	ENSMUSG00000039853.19	Trim14	chr4	protein_coding	tripartite motif-containing 14
chr4	46507427	46510437	-	46495767	46510437	A3SS	0.5	50	50	ENSMUST00000184112.8	ENSMUSG00000039853.19	Trim14	chr4	protein_coding	tripartite motif-containing 14
chr4	46533110	46534399	-	46533110	46535880	A5SS	0.33	50	50	ENSMUST00000184112.8	ENSMUSG00000039853.19	Trim14	chr4	protein_coding	tripartite motif-containing 14
chr4	46533110	46534488	-	46533110	46535880	A5SS	0.33	50	50	ENSMUST00000184112.8	ENSMUSG00000039853.19	Trim14	chr4	protein_coding	tripartite motif-containing 14
chr4	46495767;46510529	46510437;46521982	-	46495767	46521982	cassetteExon	0.5	100	100	ENSMUST00000136978.8	ENSMUSG00000039853.19	Trim14	chr4	protein_coding	tripartite motif-containing 14
chr4	46533110	46534488	-	46533110	46534399	5pMXE	0.33	50	50	ENSMUST00000142502.8	ENSMUSG00000039853.19	Trim14	chr4	protein_coding	tripartite motif-containing 14
chr4	46533109	46534399	-	46533110	46534399	A3SS	0.5	50	50	ENSMUST00000142502.8	ENSMUSG00000039853.19	Trim14	chr4	protein_coding	tripartite motif-containing 14
chr4	46495767	46521982	-	46510529	46521982	3pMXE	0.5	50	50	ENSMUST00000102924.3	ENSMUSG00000039853.19	Trim14	chr4	protein_coding	tripartite motif-containing 14
chr4	46542347	46542571	-	46542347	46543348	A5SS	0.5	50	50	ENSMUST00000030021.14	ENSMUSG00000028337.15	Coro2a	chr4	protein_coding	coronin, actin binding protein 2A
chr4	46575485	46601817	-	46563095	46601817	A3SS	0.5	50	50	ENSMUST00000107756.4	ENSMUSG00000028337.15	Coro2a	chr4	protein_coding	coronin, actin binding protein 2A
chr4	46563095	46564688	-	46563095	46601817	A5SS	0.5	50	50	ENSMUST00000107756.4	ENSMUSG00000028337.15	Coro2a	chr4	protein_coding	coronin, actin binding protein 2A
chr4	46633689	46637589	-	46630009	46637589	A3SS	0.5	50	50	ENSMUST00000084621.12	ENSMUSG00000039813.15	Tbc1d2	chr4	protein_coding	TBC1 domain family, member 2
chr4	46681328	46718786	-	46681328;46684382	46684272;46718786	ES	0.5	50	50	ENSMUST00000107749.4	ENSMUSG00000039809.11	Gabbr2	chr4	protein_coding	gamma-aminobutyric acid (GABA) B receptor, 2
chr4	46684382	46687776	-	46684382	46718786	A5SS	0.5	50	50	ENSMUST00000107749.4	ENSMUSG00000039809.11	Gabbr2	chr4	protein_coding	gamma-aminobutyric acid (GABA) B receptor, 2
chr4	46846451	46859639	-	46846451	46875665	A5SS	0.5	50	50	ENSMUST00000107749.4	ENSMUSG00000039809.11	Gabbr2	chr4	protein_coding	gamma-aminobutyric acid (GABA) B receptor, 2
chr4	47023860	47025686	-	47023860;47024679	47024506;47025686	ES	0.5	50	50	ENSMUST00000107747.8	ENSMUSG00000066191.13	Anks6	chr4	protein_coding	ankyrin repeat and sterile alpha motif domain containing 6
chr4	47033269	47038914	-	47033269;47035919	47035716;47038914	ES	0.5	50	50	ENSMUST00000107747.8	ENSMUSG00000066191.13	Anks6	chr4	protein_coding	ankyrin repeat and sterile alpha motif domain containing 6
chr4	47016816	47017523	-	47016816	47017493	A5SS	0.5	50	50	ENSMUST00000107747.8	ENSMUSG00000066191.13	Anks6	chr4	protein_coding	ankyrin repeat and sterile alpha motif domain containing 6
chr4	47092328	47108391	+	47092328;47104269	47104100;47108391	ES	0.5	50	50	ENSMUST00000045041.12	ENSMUSG00000039774.13	Galnt12	chr4	protein_coding	polypeptide N-acetylgalactosaminyltransferase 12
chr4	47279954;47280214	47280149;47280852	+	47279954	47280852	cassetteExon	0.5	100	100	ENSMUST00000082303.13	ENSMUSG00000028339.18	Col15a1	chr4	protein_coding	collagen, type XV, alpha 1
chr4	47238179	47245351	+	47208534	47245351	A5SS	0.5	50	50	ENSMUST00000082303.13	ENSMUSG00000028339.18	Col15a1	chr4	protein_coding	collagen, type XV, alpha 1
chr4	47258586	47258670	+	47257269	47258670	A5SS	0.5	50	50	ENSMUST00000082303.13	ENSMUSG00000028339.18	Col15a1	chr4	protein_coding	collagen, type XV, alpha 1
chr4	47258912	47259852	+	47258804	47259852	A5SS	0.5	50	50	ENSMUST00000082303.13	ENSMUSG00000028339.18	Col15a1	chr4	protein_coding	collagen, type XV, alpha 1
chr4	47288199	47289334	+	47287092	47289334	A5SS	0.25	50	50	ENSMUST00000082303.13	ENSMUSG00000028339.18	Col15a1	chr4	protein_coding	collagen, type XV, alpha 1
chr4	47288503	47289334	+	47287092	47289334	A5SS	0.25	50	50	ENSMUST00000082303.13	ENSMUSG00000028339.18	Col15a1	chr4	protein_coding	collagen, type XV, alpha 1
chr4	47288869	47289334	+	47287092	47289334	A5SS	0.25	50	50	ENSMUST00000082303.13	ENSMUSG00000028339.18	Col15a1	chr4	protein_coding	collagen, type XV, alpha 1
chr4	47303774	47303871	+	47300614	47303871	A5SS	0.5	50	50	ENSMUST00000082303.13	ENSMUSG00000028339.18	Col15a1	chr4	protein_coding	collagen, type XV, alpha 1
chr4	47288503	47289334	+	47288199	47289334	A5SS	0.25	50	50	ENSMUST00000140413.8	ENSMUSG00000028339.18	Col15a1	chr4	protein_coding	collagen, type XV, alpha 1
chr4	47288869	47289334	+	47288199	47289334	A5SS	0.25	50	50	ENSMUST00000140413.8	ENSMUSG00000028339.18	Col15a1	chr4	protein_coding	collagen, type XV, alpha 1
chr4	47288503	47289334	+	47288869	47289334	A5SS	0.25	50	50	ENSMUST00000107731.9	ENSMUSG00000028339.18	Col15a1	chr4	protein_coding	collagen, type XV, alpha 1
chr4	47383994	47393259	+	47383994	47393247	A3SS	0.5	50	50	ENSMUST00000007757.15	ENSMUSG00000007613.16	Tgfbr1	chr4	protein_coding	transforming growth factor, beta receptor I
chr4	47383044	47383749	+	47353396	47383749	A5SS	0.5	50	50	ENSMUST00000007757.15	ENSMUSG00000007613.16	Tgfbr1	chr4	protein_coding	transforming growth factor, beta receptor I
chr4	47386489	47393247	+	47383994	47393247	A5SS	0.5	50	50	ENSMUST00000007757.15	ENSMUSG00000007613.16	Tgfbr1	chr4	protein_coding	transforming growth factor, beta receptor I
chr4	47353861	47382913	+	47353861	47361206	3pMXE	0.5	50	50	ENSMUST00000123962.2	ENSMUSG00000007613.16	Tgfbr1	chr4	protein_coding	transforming growth factor, beta receptor I
chr4	47472385	47473939	-	47472458	47473939	A3SS	0.5	50	50	ENSMUST00000044148.3	ENSMUSG00000039740.7	Alg2	chr4	protein_coding	asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase)
chr4	47474839	47474912	+	47474753	47474912	A5SS	0.5	50	50	ENSMUST00000065678.6	ENSMUSG00000053317.12	Sec61b	chr4	protein_coding	Sec61 beta subunit
chr4	48049128;48050005	48049934;48051246	+	48049128	48051246	cassetteExon	0.5	100	100	ENSMUST00000030025.10	ENSMUSG00000028341.10	Nr4a3	chr4	protein_coding	nuclear receptor subfamily 4, group A, member 3
chr4	48049128	48051246	+	48049128	48049934	3pMXE	0.5	50	50	ENSMUST00000154186.2	ENSMUSG00000028341.10	Nr4a3	chr4	protein_coding	nuclear receptor subfamily 4, group A, member 3
chr4	48124958;48129098	48129053;48131765	+	48124958	48131765	cassetteExon	0.5	100	100	ENSMUST00000107721.8	ENSMUSG00000061455.14	Stx17	chr4	protein_coding	syntaxin 17
chr4	48131949;48140485	48140420;48158811	+	48131949	48158811	cassetteExon	0.5	100	100	ENSMUST00000107721.8	ENSMUSG00000061455.14	Stx17	chr4	protein_coding	syntaxin 17
chr4	48125066	48131765	+	48124958	48131765	A5SS	0.33	50	50	ENSMUST00000107721.8	ENSMUSG00000061455.14	Stx17	chr4	protein_coding	syntaxin 17
chr4	48129098	48131765	+	48125066	48131765	A5SS	0.33	50	50	ENSMUST00000153502.8	ENSMUSG00000061455.14	Stx17	chr4	protein_coding	syntaxin 17
chr4	48238366	48241296	-	48236988	48241296	A3SS	0.5	50	50	ENSMUST00000030028.5	ENSMUSG00000028343.11	Erp44	chr4	protein_coding	endoplasmic reticulum protein 44
chr4	48243549	48244322	-	48243549	48279384	A5SS	0.5	50	50	ENSMUST00000030028.5	ENSMUSG00000028343.11	Erp44	chr4	protein_coding	endoplasmic reticulum protein 44
chr4	48279975	48280760	+	48279975	48283226	A3SS	0.5	50	50	ENSMUST00000156602.2	ENSMUSG00000028344.13	Invs	chr4	protein_coding	inversin
chr4	48382278	48389959	+	48382278;48385272	48385105;48389959	ES	0.5	50	50	ENSMUST00000030029.10	ENSMUSG00000028344.13	Invs	chr4	protein_coding	inversin
chr4	48398279	48407598	+	48398279;48402939	48402833;48407598	ES	0.5	50	50	ENSMUST00000030029.10	ENSMUSG00000028344.13	Invs	chr4	protein_coding	inversin
chr4	48390139;48391414	48391305;48392584	+	48390139	48392584	cassetteExon	0.5	100	100	ENSMUST00000030029.10	ENSMUSG00000028344.13	Invs	chr4	protein_coding	inversin
chr4	48460102	48462769	-	48459999	48462769	A3SS	0.5	50	50	ENSMUST00000155905.8	ENSMUSG00000028345.16	Tex10	chr4	protein_coding	testis expressed gene 10
chr4	48467904	48468754	-	48467904	48468281	A5SS	0.5	50	50	ENSMUST00000155905.8	ENSMUSG00000028345.16	Tex10	chr4	protein_coding	testis expressed gene 10
chr4	48470072;48472339	48472104;48473266	-	48470072	48473266	cassetteExon	0.5	100	100	ENSMUST00000030030.15	ENSMUSG00000028345.16	Tex10	chr4	protein_coding	testis expressed gene 10
chr4	48540271	48552380	+	48539997	48552380	A5SS	0.25	50	50	ENSMUST00000061135.8	ENSMUSG00000039693.12	Msantd3	chr4	protein_coding	Myb/SANT-like DNA-binding domain containing 3
chr4	48540568	48552380	+	48539997	48552380	A5SS	0.25	50	50	ENSMUST00000061135.8	ENSMUSG00000039693.12	Msantd3	chr4	protein_coding	Myb/SANT-like DNA-binding domain containing 3
chr4	48549997	48552380	+	48539997	48552380	A5SS	0.25	50	50	ENSMUST00000061135.8	ENSMUSG00000039693.12	Msantd3	chr4	protein_coding	Myb/SANT-like DNA-binding domain containing 3
chr4	48559990	48560844	+	48552830	48560844	A5SS	0.5	50	50	ENSMUST00000061135.8	ENSMUSG00000039693.12	Msantd3	chr4	protein_coding	Myb/SANT-like DNA-binding domain containing 3
chr4	48540568	48552380	+	48540271	48552380	A5SS	0.25	50	50	ENSMUST00000064807.9	ENSMUSG00000039693.12	Msantd3	chr4	protein_coding	Myb/SANT-like DNA-binding domain containing 3
chr4	48549997	48552380	+	48540271	48552380	A5SS	0.25	50	50	ENSMUST00000064807.9	ENSMUSG00000039693.12	Msantd3	chr4	protein_coding	Myb/SANT-like DNA-binding domain containing 3
chr4	48540568;48549997	48549922;48552380	+	48540568	48552380	cassetteExon	0.5	100	100	ENSMUST00000107704.2	ENSMUSG00000039693.12	Msantd3	chr4	protein_coding	Myb/SANT-like DNA-binding domain containing 3
chr4	48614983	48617232	+	48614983	48617235	A3SS	0.5	50	50	ENSMUST00000030032.13	ENSMUSG00000028347.15	Tmeff1	chr4	protein_coding	transmembrane protein with EGF-like and two follistatin-like domains 1
chr4	48658932	48660155	+	48658932	48662001	A3SS	0.5	50	50	ENSMUST00000030032.13	ENSMUSG00000028347.15	Tmeff1	chr4	protein_coding	transmembrane protein with EGF-like and two follistatin-like domains 1
chr4	49381870	49383086	-	49381924	49383086	A3SS	0.5	50	50	ENSMUST00000081541.9	ENSMUSG00000060317.10	Acnat2	chr4	protein_coding	acyl-coenzyme A amino acid N-acyltransferase 2
chr4	49383576	49405691	-	49383576	49407663	A5SS	0.5	50	50	ENSMUST00000081541.9	ENSMUSG00000060317.10	Acnat2	chr4	protein_coding	acyl-coenzyme A amino acid N-acyltransferase 2
chr4	49449298	49450644	-	49449244	49450644	A3SS	0.5	50	50	ENSMUST00000107697.2	ENSMUSG00000070985.4	Acnat1	chr4	protein_coding	acyl-coenzyme A amino acid N-acyltransferase 1
chr4	49537138	49538128	-	49536888	49538128	A3SS	0.5	50	50	ENSMUST00000029987.10	ENSMUSG00000028307.10	Aldob	chr4	protein_coding	aldolase B, fructose-bisphosphate
chr4	49587241	49593827	-	49587241	49597624	A5SS	0.33	50	50	ENSMUST00000042750.3	ENSMUSG00000039611.3	Pgap4	chr4	protein_coding	post-GPI attachment to proteins GalNAc transferase 4
chr4	49587241	49597199	-	49587241	49597624	A5SS	0.33	50	50	ENSMUST00000042750.3	ENSMUSG00000039611.3	Pgap4	chr4	protein_coding	post-GPI attachment to proteins GalNAc transferase 4
chr4	49587241	49593827	-	49587241	49597199	A5SS	0.33	50	50	ENSMUST00000150664.2	ENSMUSG00000039611.3	Pgap4	chr4	protein_coding	post-GPI attachment to proteins GalNAc transferase 4
chr4	49632211	49632365	+	49632033	49632365	A5SS	0.5	50	50	ENSMUST00000140341.8	ENSMUSG00000028309.15	Rnf20	chr4	protein_coding	ring finger protein 20
chr4	49638073	49638187	+	49638073	49644484	A3SS	0.5	50	50	ENSMUST00000146547.2	ENSMUSG00000028309.15	Rnf20	chr4	protein_coding	ring finger protein 20
chr4	49642184	49644484	+	49638073	49644484	A5SS	0.5	50	50	ENSMUST00000146547.2	ENSMUSG00000028309.15	Rnf20	chr4	protein_coding	ring finger protein 20
chr4	49665565	49670024	-	49665625	49670024	A3SS	0.5	50	50	ENSMUST00000093859.11	ENSMUSG00000039579.16	Grin3a	chr4	protein_coding	glutamate receptor ionotropic, NMDA3A
chr4	49708008	49714130	-	49702870	49714130	A3SS	0.5	50	50	ENSMUST00000093859.11	ENSMUSG00000039579.16	Grin3a	chr4	protein_coding	glutamate receptor ionotropic, NMDA3A
chr4	52439334	52440201	+	52439410	52440201	A5SS	0.33	50	50	ENSMUST00000102915.10	ENSMUSG00000028312.20	Smc2	chr4	protein_coding	structural maintenance of chromosomes 2
chr4	52439334	52447713	+	52446074	52447713	A5SS&ES	0.5	50	50	ENSMUST00000102915.10	ENSMUSG00000028312.20	Smc2	chr4	protein_coding	structural maintenance of chromosomes 2
chr4	52439459	52440201	+	52439410	52440201	A5SS	0.33	50	50	ENSMUST00000102915.10	ENSMUSG00000028312.20	Smc2	chr4	protein_coding	structural maintenance of chromosomes 2
chr4	52439459	52440201	+	52439334	52440201	A5SS	0.33	50	50	ENSMUST00000117280.8	ENSMUSG00000028312.20	Smc2	chr4	protein_coding	structural maintenance of chromosomes 2
chr4	52439334	52440201	+	52439334	52447713	A3SS	0.5	50	50	ENSMUST00000146787.2	ENSMUSG00000028312.20	Smc2	chr4	protein_coding	structural maintenance of chromosomes 2
chr4	52911170	52916538	-	52911820	52916538	A3SS	0.5	50	50	ENSMUST00000107667.3	ENSMUSG00000051593.5	Olfr272	chr4	protein_coding	olfactory receptor 272
chr4	52916666	52918949	-	52916635	52918949	A3SS	0.5	50	50	ENSMUST00000107667.3	ENSMUSG00000051593.5	Olfr272	chr4	protein_coding	olfactory receptor 272
chr4	52965491	52967816	+	52964831	52967816	A5SS	0.5	50	50	ENSMUST00000215010.2	ENSMUSG00000070983.4	Olfr270	chr4	protein_coding	olfactory receptor 270
chr4	52968159	52968348	+	52967933	52968348	A5SS	0.5	50	50	ENSMUST00000215010.2	ENSMUSG00000070983.4	Olfr270	chr4	protein_coding	olfactory receptor 270
chr4	52989498	52993975	+	52989492	52993975	A5SS	0.5	50	50	ENSMUST00000015386.12	ENSMUSG00000015242.15	Nipsnap3a	chr4	protein_coding	nipsnap homolog 3A
chr4	53017207	53021111	+	53017207;53020331	53020182;53021111	ES	0.5	50	50	ENSMUST00000015391.10	ENSMUSG00000015247.11	Nipsnap3b	chr4	protein_coding	nipsnap homolog 3B
chr4	53215293	53215500	-	53214674	53215500	A3SS	0.5	50	50	ENSMUST00000146501.8	ENSMUSG00000087192.8	Lexis1	chr4	lncRNA	lipid responsive LXR-induced inhibitor of cholesterol synthesis 1
chr4	53263234	53263740	-	53263234	53270079	A5SS	0.33	50	50	ENSMUST00000123127.3	ENSMUSG00000086712.3	Mexis	chr4	lncRNA	macrophage expressed LXRa(NR1H3)-dependent amplifier of Abca1 transcription lncRNA
chr4	53263234	53265249	-	53263234	53270079	A5SS	0.33	50	50	ENSMUST00000123127.3	ENSMUSG00000086712.3	Mexis	chr4	lncRNA	macrophage expressed LXRa(NR1H3)-dependent amplifier of Abca1 transcription lncRNA
chr4	53263234	53263740	-	53263234	53265249	A5SS	0.33	50	50	ENSMUST00000186737.2	ENSMUSG00000086712.3	Mexis	chr4	lncRNA	macrophage expressed LXRa(NR1H3)-dependent amplifier of Abca1 transcription lncRNA
chr4	53481553	53517545	+	53481553;53491530	53491388;53517545	ES	0.5	50	50	ENSMUST00000107646.9	ENSMUSG00000028412.18	Slc44a1	chr4	protein_coding	solute carrier family 44, member 1
chr4	53545768	53553486	+	53545768	53549989	3pMXE	0.5	50	50	ENSMUST00000107646.9	ENSMUSG00000028412.18	Slc44a1	chr4	protein_coding	solute carrier family 44, member 1
chr4	53563221	53565397	+	53563221	53621595	A3SS	0.5	50	50	ENSMUST00000102911.10	ENSMUSG00000028412.18	Slc44a1	chr4	protein_coding	solute carrier family 44, member 1
chr4	53596373	53621595	+	53563221	53621595	A5SS	0.5	50	50	ENSMUST00000102911.10	ENSMUSG00000028412.18	Slc44a1	chr4	protein_coding	solute carrier family 44, member 1
chr4	53686517	53687207	+	53686517	53693984	A3SS	0.33	50	50	ENSMUST00000132151.8	ENSMUSG00000054752.17	Fsd1l	chr4	protein_coding	fibronectin type III and SPRY domain containing 1-like
chr4	53686517	53693987	+	53686517	53693984	A3SS	0.33	50	50	ENSMUST00000132151.8	ENSMUSG00000054752.17	Fsd1l	chr4	protein_coding	fibronectin type III and SPRY domain containing 1-like
chr4	53631900	53646987	+	53631612	53646987	A5SS	0.33	50	50	ENSMUST00000132151.8	ENSMUSG00000054752.17	Fsd1l	chr4	protein_coding	fibronectin type III and SPRY domain containing 1-like
chr4	53643294	53646987	+	53631612	53646987	A5SS	0.33	50	50	ENSMUST00000132151.8	ENSMUSG00000054752.17	Fsd1l	chr4	protein_coding	fibronectin type III and SPRY domain containing 1-like
chr4	53686517	53693987	+	53686517;53687239	53687207;53693987	ES	0.5	50	50	ENSMUST00000159415.9	ENSMUSG00000054752.17	Fsd1l	chr4	protein_coding	fibronectin type III and SPRY domain containing 1-like
chr4	53643294	53646987	+	53631900	53646987	A5SS	0.33	50	50	ENSMUST00000129648.3	ENSMUSG00000054752.17	Fsd1l	chr4	protein_coding	fibronectin type III and SPRY domain containing 1-like
chr4	53720209;53724742	53724605;53729980	+	53720209	53729980	cassetteExon	0.5	100	100	ENSMUST00000128667.8	ENSMUSG00000028414.18	Fktn	chr4	protein_coding	fukutin
chr4	53737659;53742766	53742496;53744619	+	53737659	53744619	cassetteExon	0.5	100	100	ENSMUST00000128667.8	ENSMUSG00000028414.18	Fktn	chr4	protein_coding	fukutin
chr4	53714546	53720007	+	53714195	53720007	A5SS	0.5	50	50	ENSMUST00000128667.8	ENSMUSG00000028414.18	Fktn	chr4	protein_coding	fukutin
chr4	53826220	53827293	+	53826220	53840627	A3SS	0.5	50	50	ENSMUST00000030127.13	ENSMUSG00000028420.14	Tmem38b	chr4	protein_coding	transmembrane protein 38B
chr4	53840783	53847477	+	53840783	53848866	A3SS	0.5	50	50	ENSMUST00000030127.13	ENSMUSG00000028420.14	Tmem38b	chr4	protein_coding	transmembrane protein 38B
chr4	54948232	55007533	+	54945101	55007533	A5SS	0.5	50	50	ENSMUST00000133895.8	ENSMUSG00000060206.12	Zfp462	chr4	protein_coding	zinc finger protein 462
chr4	55014847	55016814	+	55014847	55016997	A3SS	0.33	50	50	ENSMUST00000098070.10	ENSMUSG00000060206.12	Zfp462	chr4	protein_coding	zinc finger protein 462
chr4	55014847	55016817	+	55014847	55016997	A3SS	0.33	50	50	ENSMUST00000098070.10	ENSMUSG00000060206.12	Zfp462	chr4	protein_coding	zinc finger protein 462
chr4	55014847	55016814	+	55014847	55016817	A3SS	0.33	50	50	ENSMUST00000030131.12	ENSMUSG00000060206.12	Zfp462	chr4	protein_coding	zinc finger protein 462
chr4	55131676	55135175	-	55131676	55136108	A5SS	0.5	50	50	ENSMUST00000150455.2	ENSMUSG00000087614.2	Gm12514	chr4	lncRNA	predicted gene 12514
chr4	55350427	55350898	+	55350427	55366777	A3SS	0.5	50	50	ENSMUST00000030134.9	ENSMUSG00000028426.11	Rad23b	chr4	protein_coding	RAD23 homolog B, nucleotide excision repair protein
chr4	55350250	55366777	+	55350427	55366777	A5SS	0.5	50	50	ENSMUST00000030134.9	ENSMUSG00000028426.11	Rad23b	chr4	protein_coding	RAD23 homolog B, nucleotide excision repair protein
chr4	55530983	55531867	-	55530983;55531750	55531630;55531867	ES	0.5	50	50	ENSMUST00000107619.3	ENSMUSG00000003032.9	Klf4	chr4	protein_coding	Kruppel-like factor 4 (gut)
chr4	55530983	55531867	-	55530983	55531630	5pMXE	0.5	50	50	ENSMUST00000129250.2	ENSMUSG00000003032.9	Klf4	chr4	protein_coding	Kruppel-like factor 4 (gut)
chr4	56804283;56805397	56805314;56805682	+	56804283	56805682	cassetteExon	0.5	100	100	ENSMUST00000045368.12	ENSMUSG00000038827.12	Abitram	chr4	protein_coding	actin binding transcription modulator
chr4	56802726	56803508	+	56802726	56803596	A3SS	0.5	50	50	ENSMUST00000045368.12	ENSMUSG00000038827.12	Abitram	chr4	protein_coding	actin binding transcription modulator
chr4	56837902;56838047	56838005;56838966	-	56837902	56838966	cassetteExon	0.5	100	100	ENSMUST00000045142.15	ENSMUSG00000038816.15	Ctnnal1	chr4	protein_coding	catenin (cadherin associated protein), alpha-like 1
chr4	56826383	56827252	-	56826424	56827252	A3SS	0.5	50	50	ENSMUST00000045142.15	ENSMUSG00000038816.15	Ctnnal1	chr4	protein_coding	catenin (cadherin associated protein), alpha-like 1
chr4	56840919	56841561	-	56839055	56841561	A3SS	0.5	50	50	ENSMUST00000045142.15	ENSMUSG00000038816.15	Ctnnal1	chr4	protein_coding	catenin (cadherin associated protein), alpha-like 1
chr4	56813886	56814170	-	56813886	56816181	A5SS	0.5	50	50	ENSMUST00000045142.15	ENSMUSG00000038816.15	Ctnnal1	chr4	protein_coding	catenin (cadherin associated protein), alpha-like 1
chr4	56837902	56838422	-	56837902	56838966	A5SS	0.33	50	50	ENSMUST00000045142.15	ENSMUSG00000038816.15	Ctnnal1	chr4	protein_coding	catenin (cadherin associated protein), alpha-like 1
chr4	56844634	56845964	-	56844634	56847810	A5SS	0.5	50	50	ENSMUST00000045142.15	ENSMUSG00000038816.15	Ctnnal1	chr4	protein_coding	catenin (cadherin associated protein), alpha-like 1
chr4	56837902	56838422	-	56837902	56838005	A5SS	0.33	50	50	ENSMUST00000127908.8	ENSMUSG00000038816.15	Ctnnal1	chr4	protein_coding	catenin (cadherin associated protein), alpha-like 1
chr4	56837902	56838966	-	56837902	56838005	A5SS&ES	0.33	50	50	ENSMUST00000127908.8	ENSMUSG00000038816.15	Ctnnal1	chr4	protein_coding	catenin (cadherin associated protein), alpha-like 1
chr4	56916806	56923339	-	56916806;56922410	56922387;56923339	ES	0.5	50	50	ENSMUST00000068792.13	ENSMUSG00000055296.15	Tmem245	chr4	protein_coding	transmembrane protein 245
chr4	56899428;56903247	56903212;56903918	-	56899428	56903918	cassetteExon	0.5	100	100	ENSMUST00000068792.13	ENSMUSG00000055296.15	Tmem245	chr4	protein_coding	transmembrane protein 245
chr4	56910247	56911941	-	56910247	56912048	A5SS	0.5	50	50	ENSMUST00000068792.13	ENSMUSG00000055296.15	Tmem245	chr4	protein_coding	transmembrane protein 245
chr4	56903247	56903354	-	56903247	56903918	A5SS	0.5	50	50	ENSMUST00000107609.4	ENSMUSG00000055296.15	Tmem245	chr4	protein_coding	transmembrane protein 245
chr4	56899428	56903918	-	56899428	56903212	A5SS&ES	0.5	50	50	ENSMUST00000155625.2	ENSMUSG00000055296.15	Tmem245	chr4	protein_coding	transmembrane protein 245
chr4	56972376	56990034	-	56972376;56977001	56976917;56990034	ES	0.5	50	50	ENSMUST00000053681.6	ENSMUSG00000045589.8	Frrs1l	chr4	protein_coding	ferric-chelate reductase 1 like
chr4	57076603	57077164	-	57076603;57077002	57076914;57077164	ES	0.5	50	50	ENSMUST00000095076.10	ENSMUSG00000028434.13	Epb41l4b	chr4	protein_coding	erythrocyte membrane protein band 4.1 like 4b
chr4	57063279	57064799	-	57041052	57064799	A3SS	0.5	50	50	ENSMUST00000095076.10	ENSMUSG00000028434.13	Epb41l4b	chr4	protein_coding	erythrocyte membrane protein band 4.1 like 4b
chr4	57068338	57070309	-	57068338	57071052	A5SS	0.5	50	50	ENSMUST00000095076.10	ENSMUSG00000028434.13	Epb41l4b	chr4	protein_coding	erythrocyte membrane protein band 4.1 like 4b
chr4	57103528	57119919	-	57103528	57142848	A5SS	0.33	50	50	ENSMUST00000095076.10	ENSMUSG00000028434.13	Epb41l4b	chr4	protein_coding	erythrocyte membrane protein band 4.1 like 4b
chr4	57103528	57138028	-	57103528	57142848	A5SS	0.33	50	50	ENSMUST00000095076.10	ENSMUSG00000028434.13	Epb41l4b	chr4	protein_coding	erythrocyte membrane protein band 4.1 like 4b
chr4	57010178	57016854	-	56999727	57016854	A3SS	0.5	50	50	ENSMUST00000044022.5	ENSMUSG00000028434.13	Epb41l4b	chr4	protein_coding	erythrocyte membrane protein band 4.1 like 4b
chr4	56999727	57007906	-	56999727	57016854	A5SS	0.5	50	50	ENSMUST00000044022.5	ENSMUSG00000028434.13	Epb41l4b	chr4	protein_coding	erythrocyte membrane protein band 4.1 like 4b
chr4	57103528	57119919	-	57103528	57138028	A5SS	0.33	50	50	ENSMUST00000136337.8	ENSMUSG00000028434.13	Epb41l4b	chr4	protein_coding	erythrocyte membrane protein band 4.1 like 4b
chr4	57262507	57264983	-	57262507;57264908	57264866;57264983	ES	0.5	50	50	ENSMUST00000075637.11	ENSMUSG00000038764.15	Ptpn3	chr4	protein_coding	protein tyrosine phosphatase, non-receptor type 3
chr4	57270177	57282480	-	57270177	57301672	A5SS	0.2	50	50	ENSMUST00000075637.11	ENSMUSG00000038764.15	Ptpn3	chr4	protein_coding	protein tyrosine phosphatase, non-receptor type 3
chr4	57270177	57300281	-	57270177	57301672	A5SS	0.2	50	50	ENSMUST00000075637.11	ENSMUSG00000038764.15	Ptpn3	chr4	protein_coding	protein tyrosine phosphatase, non-receptor type 3
chr4	57270177	57300593	-	57270177	57301672	A5SS	0.2	50	50	ENSMUST00000075637.11	ENSMUSG00000038764.15	Ptpn3	chr4	protein_coding	protein tyrosine phosphatase, non-receptor type 3
chr4	57270177	57301324	-	57270177	57301672	A5SS	0.2	50	50	ENSMUST00000075637.11	ENSMUSG00000038764.15	Ptpn3	chr4	protein_coding	protein tyrosine phosphatase, non-receptor type 3
chr4	57270177	57300593	-	57270177	57300281	5pMXE	0.2	50	50	ENSMUST00000153926.8	ENSMUSG00000038764.15	Ptpn3	chr4	protein_coding	protein tyrosine phosphatase, non-receptor type 3
chr4	57270177	57301324	-	57270177	57300281	5pMXE	0.2	50	50	ENSMUST00000153926.8	ENSMUSG00000038764.15	Ptpn3	chr4	protein_coding	protein tyrosine phosphatase, non-receptor type 3
chr4	57270177	57282480	-	57270177	57300281	A5SS	0.2	50	50	ENSMUST00000153926.8	ENSMUSG00000038764.15	Ptpn3	chr4	protein_coding	protein tyrosine phosphatase, non-receptor type 3
chr4	57270177	57301324	-	57270177	57300593	5pMXE	0.2	50	50	ENSMUST00000150445.2	ENSMUSG00000038764.15	Ptpn3	chr4	protein_coding	protein tyrosine phosphatase, non-receptor type 3
chr4	57270177;57282584	57282480;57300593	-	57270177	57300593	cassetteExon	0.5	100	100	ENSMUST00000150445.2	ENSMUSG00000038764.15	Ptpn3	chr4	protein_coding	protein tyrosine phosphatase, non-receptor type 3
chr4	57270177	57282480	-	57270177	57301324	A5SS	0.2	50	50	ENSMUST00000130900.2	ENSMUSG00000038764.15	Ptpn3	chr4	protein_coding	protein tyrosine phosphatase, non-receptor type 3
chr4	57362219	57364034	-	57360901	57364034	A3SS	0.5	50	50	ENSMUST00000137606.2	ENSMUSG00000087044.2	1700042G15Rik	chr4	lncRNA	RIKEN cDNA 1700042G15 gene
chr4	57361417	57362075	-	57361417	57362122	A5SS	0.5	50	50	ENSMUST00000152001.2	ENSMUSG00000087044.2	1700042G15Rik	chr4	lncRNA	RIKEN cDNA 1700042G15 gene
chr4	57689544	57757601	+	57689544	57709451	3pMXE	0.33	50	50	ENSMUST00000102905.8	ENSMUSG00000090053.10	Pakap	chr4	protein_coding	paralemmin A kinase anchor protein
chr4	57689544;57698588	57698490;57709451	+	57689544	57709451	cassetteExon	0.5	100	100	ENSMUST00000102905.8	ENSMUSG00000090053.10	Pakap	chr4	protein_coding	paralemmin A kinase anchor protein
chr4	57698588	57757601	+	57698588	57709451	3pMXE	0.5	50	50	ENSMUST00000142556.2	ENSMUSG00000090053.10	Pakap	chr4	protein_coding	paralemmin A kinase anchor protein
chr4	57689544	57757601	+	57689544;57698588	57698490;57757601	ES	0.2	50	50	ENSMUST00000098066.9	ENSMUSG00000089945.14	Pakap	chr4	protein_coding	paralemmin A kinase anchor protein
chr4	57883202	57892869	+	57883202;57886327	57886289;57892869	ES	0.33	50	50	ENSMUST00000098066.9	ENSMUSG00000089945.14	Pakap	chr4	protein_coding	paralemmin A kinase anchor protein
chr4	57689544	57709451	+	57689544	57698490	A3SS&ES	0.33	50	50	ENSMUST00000098066.9	ENSMUSG00000089945.14	Pakap	chr4	protein_coding	paralemmin A kinase anchor protein
chr4	57757683	57856765	+	57757683	57854562	A3SS	0.5	50	50	ENSMUST00000098066.9	ENSMUSG00000089945.14	Pakap	chr4	protein_coding	paralemmin A kinase anchor protein
chr4	57710143	57757601	+	57698588	57757601	A5SS	0.2	50	50	ENSMUST00000098066.9	ENSMUSG00000089945.14	Pakap	chr4	protein_coding	paralemmin A kinase anchor protein
chr4	57717758	57757601	+	57698588	57757601	A5SS	0.2	50	50	ENSMUST00000098066.9	ENSMUSG00000089945.14	Pakap	chr4	protein_coding	paralemmin A kinase anchor protein
chr4	57742473	57757601	+	57698588	57757601	A5SS	0.2	50	50	ENSMUST00000098066.9	ENSMUSG00000089945.14	Pakap	chr4	protein_coding	paralemmin A kinase anchor protein
chr4	57782322	57854562	+	57757683	57854562	A5SS	0.2	50	50	ENSMUST00000098066.9	ENSMUSG00000089945.14	Pakap	chr4	protein_coding	paralemmin A kinase anchor protein
chr4	57821254	57854562	+	57757683	57854562	A5SS	0.2	50	50	ENSMUST00000098066.9	ENSMUSG00000089945.14	Pakap	chr4	protein_coding	paralemmin A kinase anchor protein
chr4	57829427	57854562	+	57757683	57854562	A5SS	0.2	50	50	ENSMUST00000098066.9	ENSMUSG00000089945.14	Pakap	chr4	protein_coding	paralemmin A kinase anchor protein
chr4	57845306	57854562	+	57757683	57854562	A5SS	0.2	50	50	ENSMUST00000098066.9	ENSMUSG00000089945.14	Pakap	chr4	protein_coding	paralemmin A kinase anchor protein
chr4	57698588	57757601	+	57698588;57710143	57709451;57757601	ES	0.2	50	50	ENSMUST00000126465.8	ENSMUSG00000089945.14	Pakap	chr4	protein_coding	paralemmin A kinase anchor protein
chr4	57717758	57757601	+	57710143	57757601	A5SS	0.2	50	50	ENSMUST00000126465.8	ENSMUSG00000089945.14	Pakap	chr4	protein_coding	paralemmin A kinase anchor protein
chr4	57742473	57757601	+	57710143	57757601	A5SS	0.2	50	50	ENSMUST00000126465.8	ENSMUSG00000089945.14	Pakap	chr4	protein_coding	paralemmin A kinase anchor protein
chr4	57710143	57757601	+	57689544	57757601	A5SS	0.2	50	50	ENSMUST00000150412.4	ENSMUSG00000089945.14	Pakap	chr4	protein_coding	paralemmin A kinase anchor protein
chr4	57717758	57757601	+	57689544	57757601	A5SS	0.2	50	50	ENSMUST00000150412.4	ENSMUSG00000089945.14	Pakap	chr4	protein_coding	paralemmin A kinase anchor protein
chr4	57742473	57757601	+	57689544	57757601	A5SS	0.2	50	50	ENSMUST00000150412.4	ENSMUSG00000089945.14	Pakap	chr4	protein_coding	paralemmin A kinase anchor protein
chr4	57742473	57757601	+	57717758	57757601	A5SS	0.2	50	50	ENSMUST00000098065.4	ENSMUSG00000038729.25	Pakap	chr4	protein_coding	paralemmin A kinase anchor protein
chr4	57857037	57892869	+	57857037;57883202	57883024;57892869	ES	0.33	50	50	ENSMUST00000107600.8	ENSMUSG00000038729.25	Pakap	chr4	protein_coding	paralemmin A kinase anchor protein
chr4	57821254	57854562	+	57782322	57854562	A5SS	0.2	50	50	ENSMUST00000124581.2	ENSMUSG00000038729.25	Pakap	chr4	protein_coding	paralemmin A kinase anchor protein
chr4	57829427	57854562	+	57782322	57854562	A5SS	0.2	50	50	ENSMUST00000124581.2	ENSMUSG00000038729.25	Pakap	chr4	protein_coding	paralemmin A kinase anchor protein
chr4	57845306	57854562	+	57782322	57854562	A5SS	0.2	50	50	ENSMUST00000124581.2	ENSMUSG00000038729.25	Pakap	chr4	protein_coding	paralemmin A kinase anchor protein
chr4	57829427	57854562	+	57821254	57854562	A5SS	0.2	50	50	ENSMUST00000238994.2	ENSMUSG00000038729.25	Pakap	chr4	protein_coding	paralemmin A kinase anchor protein
chr4	57845306	57854562	+	57821254	57854562	A5SS	0.2	50	50	ENSMUST00000238994.2	ENSMUSG00000038729.25	Pakap	chr4	protein_coding	paralemmin A kinase anchor protein
chr4	57845306	57854562	+	57829427	57854562	A5SS	0.2	50	50	ENSMUST00000132497.2	ENSMUSG00000038729.25	Pakap	chr4	protein_coding	paralemmin A kinase anchor protein
chr4	57886327	57892869	+	57857037	57892869	A5SS	0.33	50	50	ENSMUST00000102903.8	ENSMUSG00000038729.25	Pakap	chr4	protein_coding	paralemmin A kinase anchor protein
chr4	57984230	58000245	-	57984230;57985642	57985577;58000245	ES	0.5	50	50	ENSMUST00000154540.2	ENSMUSG00000038709.16	Txndc8	chr4	protein_coding	thioredoxin domain containing 8
chr4	58000310	58002400	-	58000310	58002336	A5SS	0.5	50	50	ENSMUST00000154540.2	ENSMUSG00000038709.16	Txndc8	chr4	protein_coding	thioredoxin domain containing 8
chr4	58355856	58366798	+	58355856;58356505	58356482;58366798	ES	0.5	50	50	ENSMUST00000081919.12	ENSMUSG00000057280.16	Musk	chr4	protein_coding	muscle, skeletal, receptor tyrosine kinase
chr4	58303986;58327355	58327326;58333565	+	58303986	58333565	cassetteExon	0.5	100	100	ENSMUST00000081919.12	ENSMUSG00000057280.16	Musk	chr4	protein_coding	muscle, skeletal, receptor tyrosine kinase
chr4	58347859	58353944	+	58344318	58353944	A5SS	0.5	50	50	ENSMUST00000081919.12	ENSMUSG00000057280.16	Musk	chr4	protein_coding	muscle, skeletal, receptor tyrosine kinase
chr4	58344311	58347808	+	58344311	58347853	A3SS	0.33	50	50	ENSMUST00000177951.8	ENSMUSG00000057280.16	Musk	chr4	protein_coding	muscle, skeletal, receptor tyrosine kinase
chr4	58344311	58353937	+	58344311	58347853	A3SS&ES	0.33	50	50	ENSMUST00000177951.8	ENSMUSG00000057280.16	Musk	chr4	protein_coding	muscle, skeletal, receptor tyrosine kinase
chr4	58344311	58347808	+	58344311	58353937	A3SS	0.33	50	50	ENSMUST00000098059.10	ENSMUSG00000057280.16	Musk	chr4	protein_coding	muscle, skeletal, receptor tyrosine kinase
chr4	58487224	58504622	-	58487224	58499288	5pMXE	0.5	50	50	ENSMUST00000107570.2	ENSMUSG00000038668.15	Lpar1	chr4	protein_coding	lysophosphatidic acid receptor 1
chr4	58504781	58553134	-	58504858	58553134	A3SS	0.5	50	50	ENSMUST00000107571.8	ENSMUSG00000038668.15	Lpar1	chr4	protein_coding	lysophosphatidic acid receptor 1
chr4	58504781	58553421	-	58504781	58553134	5pMXE	0.16	50	50	ENSMUST00000055018.11	ENSMUSG00000038668.15	Lpar1	chr4	protein_coding	lysophosphatidic acid receptor 1
chr4	58504781	58553480	-	58504781	58553134	5pMXE	0.16	50	50	ENSMUST00000055018.11	ENSMUSG00000038668.15	Lpar1	chr4	protein_coding	lysophosphatidic acid receptor 1
chr4	58504781	58553730	-	58504781	58553134	5pMXE	0.16	50	50	ENSMUST00000055018.11	ENSMUSG00000038668.15	Lpar1	chr4	protein_coding	lysophosphatidic acid receptor 1
chr4	58504781	58543810	-	58504781	58553134	A5SS	0.16	50	50	ENSMUST00000055018.11	ENSMUSG00000038668.15	Lpar1	chr4	protein_coding	lysophosphatidic acid receptor 1
chr4	58504781	58553101	-	58504781	58553134	A5SS	0.16	50	50	ENSMUST00000055018.11	ENSMUSG00000038668.15	Lpar1	chr4	protein_coding	lysophosphatidic acid receptor 1
chr4	58504781	58553730	-	58504781	58553421	5pMXE	0.16	50	50	ENSMUST00000107575.9	ENSMUSG00000038668.15	Lpar1	chr4	protein_coding	lysophosphatidic acid receptor 1
chr4	58504781	58543810	-	58504781	58553421	A5SS	0.16	50	50	ENSMUST00000107575.9	ENSMUSG00000038668.15	Lpar1	chr4	protein_coding	lysophosphatidic acid receptor 1
chr4	58504781	58553101	-	58504781	58553421	A5SS	0.16	50	50	ENSMUST00000107575.9	ENSMUSG00000038668.15	Lpar1	chr4	protein_coding	lysophosphatidic acid receptor 1
chr4	58504781	58553480	-	58504781	58553421	A5SS	0.16	50	50	ENSMUST00000107575.9	ENSMUSG00000038668.15	Lpar1	chr4	protein_coding	lysophosphatidic acid receptor 1
chr4	58504781	58553730	-	58504781	58553480	5pMXE	0.16	50	50	ENSMUST00000107574.8	ENSMUSG00000038668.15	Lpar1	chr4	protein_coding	lysophosphatidic acid receptor 1
chr4	58504781	58543810	-	58504781	58553480	A5SS	0.16	50	50	ENSMUST00000107574.8	ENSMUSG00000038668.15	Lpar1	chr4	protein_coding	lysophosphatidic acid receptor 1
chr4	58504781	58553101	-	58504781	58553480	A5SS	0.16	50	50	ENSMUST00000107574.8	ENSMUSG00000038668.15	Lpar1	chr4	protein_coding	lysophosphatidic acid receptor 1
chr4	58504781	58543810	-	58504781	58553730	A5SS	0.16	50	50	ENSMUST00000147354.8	ENSMUSG00000038668.15	Lpar1	chr4	protein_coding	lysophosphatidic acid receptor 1
chr4	58504781	58553101	-	58504781	58553730	A5SS	0.16	50	50	ENSMUST00000147354.8	ENSMUSG00000038668.15	Lpar1	chr4	protein_coding	lysophosphatidic acid receptor 1
chr4	58504781	58543810	-	58504781	58553101	A5SS	0.16	50	50	ENSMUST00000145361.2	ENSMUSG00000038668.15	Lpar1	chr4	protein_coding	lysophosphatidic acid receptor 1
chr4	58885498;58905107	58905004;58912476	-	58885498	58912476	cassetteExon	0.5	100	100	ENSMUST00000102889.10	ENSMUSG00000050812.19	Ecpas	chr4	protein_coding	Ecm29 proteasome adaptor and scaffold
chr4	58860968	58861525	-	58853736	58861525	A3SS	0.5	50	50	ENSMUST00000102889.10	ENSMUSG00000050812.19	Ecpas	chr4	protein_coding	Ecm29 proteasome adaptor and scaffold
chr4	58885498	58911869	-	58885498	58912476	A5SS	0.33	50	50	ENSMUST00000102889.10	ENSMUSG00000050812.19	Ecpas	chr4	protein_coding	Ecm29 proteasome adaptor and scaffold
chr4	58885498	58911869	-	58885498;58905107	58905004;58911869	ES	0.5	50	50	ENSMUST00000149301.8	ENSMUSG00000050812.19	Ecpas	chr4	protein_coding	Ecm29 proteasome adaptor and scaffold
chr4	58905107	58912476	-	58905107	58911869	5pMXE	0.5	50	50	ENSMUST00000149301.8	ENSMUSG00000050812.19	Ecpas	chr4	protein_coding	Ecm29 proteasome adaptor and scaffold
chr4	58885498	58911869	-	58885498	58905004	A5SS&ES	0.33	50	50	ENSMUST00000144512.8	ENSMUSG00000050812.19	Ecpas	chr4	protein_coding	Ecm29 proteasome adaptor and scaffold
chr4	58995283;59013855	59013632;59017670	+	58995283	59017670	cassetteExon	0.5	100	100	ENSMUST00000148366.8	ENSMUSG00000070972.14	Dnajc25	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C25
chr4	59003557	59017670	+	58995283	59017670	A5SS	0.33	50	50	ENSMUST00000148366.8	ENSMUSG00000070972.14	Dnajc25	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C25
chr4	59013855	59017610	+	59013855	59017670	A3SS	0.5	50	50	ENSMUST00000152199.9	ENSMUSG00000070972.14	Dnajc25	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C25
chr4	59003557	59013632	+	58995283	59013632	A5SS	0.5	50	50	ENSMUST00000152199.9	ENSMUSG00000070972.14	Dnajc25	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C25
chr4	59003557	59017670	+	59013855	59017670	A5SS&ES	0.33	50	50	ENSMUST00000152199.9	ENSMUSG00000070972.14	Dnajc25	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C25
chr4	59003557;59013855	59013611;59017670	+	59003557	59017670	cassetteExon	0.5	100	100	ENSMUST00000095070.4	ENSMUSG00000070972.14	Dnajc25	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C25
chr4	59003557;59013855	59013632;59017670	+	59003557	59017670	cassetteExon	0.5	100	100	ENSMUST00000095070.4	ENSMUSG00000070972.14	Dnajc25	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C25
chr4	59003557	59013632	+	59003557	59013611	A3SS	0.33	50	50	ENSMUST00000150309.9	ENSMUSG00000070972.14	Dnajc25	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C25
chr4	59003557	59017670	+	59003557	59013611	A3SS&ES	0.33	50	50	ENSMUST00000150309.9	ENSMUSG00000070972.14	Dnajc25	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C25
chr4	59003557	59013611	+	59003557	59039227	A3SS	0.25	50	50	ENSMUST00000174664.2	ENSMUSG00000092345.2	Gm20503	chr4	protein_coding	predicted gene 20503
chr4	59003557	59013632	+	59003557	59039227	A3SS	0.25	50	50	ENSMUST00000174664.2	ENSMUSG00000092345.2	Gm20503	chr4	protein_coding	predicted gene 20503
chr4	59003557	59017670	+	59003557	59039227	A3SS	0.25	50	50	ENSMUST00000174664.2	ENSMUSG00000092345.2	Gm20503	chr4	protein_coding	predicted gene 20503
chr4	59035318	59039227	+	59003557	59039227	A5SS	0.33	50	50	ENSMUST00000174664.2	ENSMUSG00000092345.2	Gm20503	chr4	protein_coding	predicted gene 20503
chr4	59035893	59039227	+	59003557	59039227	A5SS	0.33	50	50	ENSMUST00000174664.2	ENSMUSG00000092345.2	Gm20503	chr4	protein_coding	predicted gene 20503
chr4	59035893	59039227	+	59035318	59039227	A5SS	0.33	50	50	ENSMUST00000041160.13	ENSMUSG00000038607.13	Gng10	chr4	protein_coding	guanine nucleotide binding protein (G protein), gamma 10
chr4	59351729	59362906	-	59351729	59365722	A5SS	0.5	50	50	ENSMUST00000040166.14	ENSMUSG00000038578.16	Susd1	chr4	protein_coding	sushi domain containing 1
chr4	59424150	59427955	-	59424150	59427951	A5SS	0.5	50	50	ENSMUST00000040166.14	ENSMUSG00000038578.16	Susd1	chr4	protein_coding	sushi domain containing 1
chr4	59514420	59524395	-	59514420;59517755	59517586;59524395	ES	0.5	50	50	ENSMUST00000030076.12	ENSMUSG00000028382.16	Ptbp3	chr4	protein_coding	polypyrimidine tract binding protein 3
chr4	59501474;59546182	59546149;59549148	-	59501474;59524476	59514274;59549148	MXE	0.5	100	100	ENSMUST00000030076.12	ENSMUSG00000028382.16	Ptbp3	chr4	protein_coding	polypyrimidine tract binding protein 3
chr4	59524476;59546182	59546149;59549148	-	59524476	59549148	cassetteExon	0.5	100	100	ENSMUST00000030076.12	ENSMUSG00000028382.16	Ptbp3	chr4	protein_coding	polypyrimidine tract binding protein 3
chr4	59485731	59488111	-	59485746	59488111	A3SS	0.5	50	50	ENSMUST00000030076.12	ENSMUSG00000028382.16	Ptbp3	chr4	protein_coding	polypyrimidine tract binding protein 3
chr4	59514420	59524404	-	59514420	59517586	A5SS&ES	0.33	50	50	ENSMUST00000030076.12	ENSMUSG00000028382.16	Ptbp3	chr4	protein_coding	polypyrimidine tract binding protein 3
chr4	59517755	59524404	-	59517755	59524395	A5SS	0.5	50	50	ENSMUST00000030076.12	ENSMUSG00000028382.16	Ptbp3	chr4	protein_coding	polypyrimidine tract binding protein 3
chr4	59524476	59548543	-	59524476	59549148	A5SS	0.33	50	50	ENSMUST00000030076.12	ENSMUSG00000028382.16	Ptbp3	chr4	protein_coding	polypyrimidine tract binding protein 3
chr4	59524476	59548543	-	59524476	59546149	A5SS&ES	0.33	50	50	ENSMUST00000174586.8	ENSMUSG00000028382.16	Ptbp3	chr4	protein_coding	polypyrimidine tract binding protein 3
chr4	59546182	59548531	-	59546182	59549148	A5SS	0.5	50	50	ENSMUST00000174586.8	ENSMUSG00000028382.16	Ptbp3	chr4	protein_coding	polypyrimidine tract binding protein 3
chr4	59514420	59524404	-	59514420;59517755	59517586;59524404	ES	0.5	50	50	ENSMUST00000102883.11	ENSMUSG00000028382.16	Ptbp3	chr4	protein_coding	polypyrimidine tract binding protein 3
chr4	59514420	59524395	-	59514420	59517586	A5SS&ES	0.33	50	50	ENSMUST00000102883.11	ENSMUSG00000028382.16	Ptbp3	chr4	protein_coding	polypyrimidine tract binding protein 3
chr4	59514420	59524404	-	59514420	59524395	A5SS	0.33	50	50	ENSMUST00000173699.8	ENSMUSG00000028382.16	Ptbp3	chr4	protein_coding	polypyrimidine tract binding protein 3
chr4	59501474	59546149	-	59501474	59514274	A5SS&ES	0.5	50	50	ENSMUST00000172768.8	ENSMUSG00000028382.16	Ptbp3	chr4	protein_coding	polypyrimidine tract binding protein 3
chr4	59501474;59546182	59546149;59549148	-	59501474	59549148	cassetteExon	0.5	100	100	ENSMUST00000134879.3	ENSMUSG00000028382.16	Ptbp3	chr4	protein_coding	polypyrimidine tract binding protein 3
chr4	59524476	59549148	-	59501474	59549148	A3SS	0.33	50	50	ENSMUST00000134879.3	ENSMUSG00000028382.16	Ptbp3	chr4	protein_coding	polypyrimidine tract binding protein 3
chr4	59501474	59514274	-	59501474	59549148	A5SS	0.33	50	50	ENSMUST00000134879.3	ENSMUSG00000028382.16	Ptbp3	chr4	protein_coding	polypyrimidine tract binding protein 3
chr4	59524476	59546149	-	59501474	59546149	A3SS	0.5	50	50	ENSMUST00000173884.8	ENSMUSG00000028382.16	Ptbp3	chr4	protein_coding	polypyrimidine tract binding protein 3
chr4	59524476	59549148	-	59546182	59549148	A3SS&ES	0.33	50	50	ENSMUST00000173884.8	ENSMUSG00000028382.16	Ptbp3	chr4	protein_coding	polypyrimidine tract binding protein 3
chr4	59514420	59524395	-	59517755	59524395	3pMXE	0.5	50	50	ENSMUST00000140925.3	ENSMUSG00000028382.16	Ptbp3	chr4	protein_coding	polypyrimidine tract binding protein 3
chr4	59581775;59586417	59586320;59592155	+	59581775	59592155	cassetteExon	0.5	100	100	ENSMUST00000030078.12	ENSMUSG00000028383.18	Hsdl2	chr4	protein_coding	hydroxysteroid dehydrogenase like 2
chr4	59691338	59719641	+	59691338	59737562	A3SS	0.33	50	50	ENSMUST00000070150.11	ENSMUSG00000045071.15	E130308A19Rik	chr4	protein_coding	RIKEN cDNA E130308A19 gene
chr4	59691338	59719646	+	59691338	59737562	A3SS	0.33	50	50	ENSMUST00000070150.11	ENSMUSG00000045071.15	E130308A19Rik	chr4	protein_coding	RIKEN cDNA E130308A19 gene
chr4	59733374	59737562	+	59691338	59737562	A5SS	0.5	50	50	ENSMUST00000070150.11	ENSMUSG00000045071.15	E130308A19Rik	chr4	protein_coding	RIKEN cDNA E130308A19 gene
chr4	59691338	59719646	+	59691338	59719641	A3SS	0.33	50	50	ENSMUST00000052420.7	ENSMUSG00000045071.15	E130308A19Rik	chr4	protein_coding	RIKEN cDNA E130308A19 gene
chr4	59775549	59783728	-	59775549;59782334	59782254;59783728	ES	0.5	50	50	ENSMUST00000095063.11	ENSMUSG00000038544.15	Inip	chr4	protein_coding	INTS3 and NABP interacting protein
chr4	59775549	59797830	-	59775549	59783728	5pMXE	0.33	50	50	ENSMUST00000107526.8	ENSMUSG00000038544.15	Inip	chr4	protein_coding	INTS3 and NABP interacting protein
chr4	59775549	59782254	-	59775549	59797830	A5SS	0.33	50	50	ENSMUST00000143756.2	ENSMUSG00000038544.15	Inip	chr4	protein_coding	INTS3 and NABP interacting protein
chr4	59775549	59783728	-	59782334	59783728	3pMXE	0.5	50	50	ENSMUST00000138097.2	ENSMUSG00000038544.15	Inip	chr4	protein_coding	INTS3 and NABP interacting protein
chr4	59806225	59833867	+	59806225	59857445	A3SS	0.5	50	50	ENSMUST00000030080.7	ENSMUSG00000028385.15	Snx30	chr4	protein_coding	sorting nexin family member 30
chr4	59884734	59884980	+	59879380	59884980	A5SS	0.5	50	50	ENSMUST00000030080.7	ENSMUSG00000028385.15	Snx30	chr4	protein_coding	sorting nexin family member 30
chr4	60003641	60003978	+	59964367	60003978	A5SS	0.5	50	50	ENSMUST00000107521.8	ENSMUSG00000078689.9	Mup6	chr4	protein_coding	major urinary protein 6
chr4	60067555	60067720	-	60067596	60067720	A3SS	0.5	50	50	ENSMUST00000166098.8	ENSMUSG00000073842.11	Mup7	chr4	protein_coding	major urinary protein 7
chr4	60068971	60069733	-	60068974	60069733	A3SS	0.5	50	50	ENSMUST00000166098.8	ENSMUSG00000073842.11	Mup7	chr4	protein_coding	major urinary protein 7
chr4	60139352	60140650	-	60139352	60139691	5pMXE	0.5	50	50	ENSMUST00000074700.9	ENSMUSG00000078688.12	Mup2	chr4	protein_coding	major urinary protein 2
chr4	60219707	60219872	-	60219748	60219872	A3SS	0.5	50	50	ENSMUST00000163931.8	ENSMUSG00000078687.10	Mup8	chr4	protein_coding	major urinary protein 8
chr4	60376559	60377790	-	60376559;60377451	60377318;60377790	ES	0.5	50	50	ENSMUST00000122381.8	ENSMUSG00000078686.12	Mup9	chr4	protein_coding	major urinary protein 9
chr4	60375173	60375296	-	60375132	60375296	A3SS	0.5	50	50	ENSMUST00000122381.8	ENSMUSG00000078686.12	Mup9	chr4	protein_coding	major urinary protein 9
chr4	60376742	60377318	-	60376559	60377318	A3SS	0.5	50	50	ENSMUST00000122381.8	ENSMUSG00000078686.12	Mup9	chr4	protein_coding	major urinary protein 9
chr4	60455141	60455265	-	60455100	60455265	A3SS	0.5	50	50	ENSMUST00000103012.10	ENSMUSG00000078683.10	Mup1	chr4	protein_coding	major urinary protein 1
chr4	60475541	60475883	+	60475541	60476975	A3SS	0.5	50	50	ENSMUST00000156693.2	ENSMUSG00000086253.2	Gm13773	chr4	lncRNA	predicted gene 13773
chr4	60474872	60475431	+	60460905	60475431	A5SS	0.5	50	50	ENSMUST00000156693.2	ENSMUSG00000086253.2	Gm13773	chr4	lncRNA	predicted gene 13773
chr4	60616960	60618201	-	60616960;60617862	60617729;60618201	ES	0.5	50	50	ENSMUST00000098046.10	ENSMUSG00000073834.11	Mup11	chr4	protein_coding	major urinary protein 11
chr4	61181395	61181559	-	61181436	61181559	A3SS	0.5	50	50	ENSMUST00000098042.10	ENSMUSG00000089873.9	Mup13	chr4	protein_coding	major urinary protein 13
chr4	61258552	61259321	-	61258549	61259321	A3SS	0.5	50	50	ENSMUST00000125461.8	ENSMUSG00000073830.12	Mup14	chr4	protein_coding	major urinary protein 14
chr4	61716336	61717104	+	61716336	61718183	A3SS	0.5	50	50	ENSMUST00000153865.2	ENSMUSG00000081207.5	Gm13775	chr4	lncRNA	predicted gene 13775
chr4	61715868	61716203	+	61701736	61716203	A5SS	0.5	50	50	ENSMUST00000153865.2	ENSMUSG00000081207.5	Gm13775	chr4	lncRNA	predicted gene 13775
chr4	61717841	61718183	+	61716336	61718183	A5SS	0.5	50	50	ENSMUST00000153865.2	ENSMUSG00000081207.5	Gm13775	chr4	lncRNA	predicted gene 13775
chr4	62001964	62002655	-	62001964	62002754	A5SS	0.33	50	50	ENSMUST00000107472.8	ENSMUSG00000066154.12	Mup3	chr4	protein_coding	major urinary protein 3
chr4	62001964	62002785	-	62001964	62002754	A5SS	0.33	50	50	ENSMUST00000107472.8	ENSMUSG00000066154.12	Mup3	chr4	protein_coding	major urinary protein 3
chr4	62001964	62002655	-	62001964	62002785	A5SS	0.33	50	50	ENSMUST00000084531.11	ENSMUSG00000066154.12	Mup3	chr4	protein_coding	major urinary protein 3
chr4	62122887	62126566	-	62122887	62123261	A5SS&ES	0.5	50	50	ENSMUST00000068822.4	ENSMUSG00000028389.13	Zfp37	chr4	protein_coding	zinc finger protein 37
chr4	62123345	62126054	-	62123345	62126557	A5SS	0.25	50	50	ENSMUST00000068822.4	ENSMUSG00000028389.13	Zfp37	chr4	protein_coding	zinc finger protein 37
chr4	62123345	62126315	-	62123345	62126557	A5SS	0.25	50	50	ENSMUST00000068822.4	ENSMUSG00000028389.13	Zfp37	chr4	protein_coding	zinc finger protein 37
chr4	62123345	62126566	-	62123345	62126557	A5SS	0.25	50	50	ENSMUST00000068822.4	ENSMUSG00000028389.13	Zfp37	chr4	protein_coding	zinc finger protein 37
chr4	62123345	62126566	-	62123345	62126315	5pMXE	0.25	50	50	ENSMUST00000222748.2	ENSMUSG00000028389.13	Zfp37	chr4	protein_coding	zinc finger protein 37
chr4	62123345	62126054	-	62123345	62126315	A5SS	0.25	50	50	ENSMUST00000222748.2	ENSMUSG00000028389.13	Zfp37	chr4	protein_coding	zinc finger protein 37
chr4	62122887	62126566	-	62122887;62123342	62123261;62126566	ES	0.33	50	50	ENSMUST00000222050.2	ENSMUSG00000028389.13	Zfp37	chr4	protein_coding	zinc finger protein 37
chr4	62123345	62126566	-	62123342	62126566	A3SS	0.33	50	50	ENSMUST00000222050.2	ENSMUSG00000028389.13	Zfp37	chr4	protein_coding	zinc finger protein 37
chr4	62123345	62126566	-	62123345	62126054	5pMXE	0.25	50	50	ENSMUST00000220873.2	ENSMUSG00000028389.13	Zfp37	chr4	protein_coding	zinc finger protein 37
chr4	62122887	62126566	-	62122887;62123345	62123261;62126566	ES	0.33	50	50	ENSMUST00000221329.2	ENSMUSG00000028389.13	Zfp37	chr4	protein_coding	zinc finger protein 37
chr4	62204811	62210869	+	62192071	62210869	A5SS	0.33	50	50	ENSMUST00000107468.8	ENSMUSG00000066152.12	Slc31a2	chr4	protein_coding	solute carrier family 31, member 2
chr4	62209891	62210869	+	62192071	62210869	A5SS	0.33	50	50	ENSMUST00000107468.8	ENSMUSG00000066152.12	Slc31a2	chr4	protein_coding	solute carrier family 31, member 2
chr4	62209891	62210869	+	62204811	62210869	A5SS	0.33	50	50	ENSMUST00000084530.9	ENSMUSG00000066152.12	Slc31a2	chr4	protein_coding	solute carrier family 31, member 2
chr4	62244410	62246050	-	62244410;62245143	62245018;62246050	ES	0.5	50	50	ENSMUST00000139308.2	ENSMUSG00000066151.13	Fkbp15	chr4	protein_coding	FK506 binding protein 15
chr4	62321152	62326789	-	62321152;62322789	62322693;62326789	ES	0.5	50	50	ENSMUST00000134727.8	ENSMUSG00000066149.12	Cdc26	chr4	protein_coding	cell division cycle 26
chr4	62321152	62326789	-	62321152	62322693	5pMXE	0.5	50	50	ENSMUST00000156854.2	ENSMUSG00000066149.12	Cdc26	chr4	protein_coding	cell division cycle 26
chr4	62372174	62374048	-	62367995	62374048	A3SS	0.5	50	50	ENSMUST00000146108.8	ENSMUSG00000028391.17	Wdr31	chr4	protein_coding	WD repeat domain 31
chr4	62372174	62375677	-	62374210	62375677	A3SS&ES	0.5	50	50	ENSMUST00000146108.8	ENSMUSG00000028391.17	Wdr31	chr4	protein_coding	WD repeat domain 31
chr4	62381710	62382164	-	62381713	62382164	A3SS	0.5	50	50	ENSMUST00000146108.8	ENSMUSG00000028391.17	Wdr31	chr4	protein_coding	WD repeat domain 31
chr4	62372174	62375677	-	62372174;62374210	62374048;62375677	ES	0.5	50	50	ENSMUST00000120095.8	ENSMUSG00000028391.17	Wdr31	chr4	protein_coding	WD repeat domain 31
chr4	62387170	62388880	-	62387170	62388949	A5SS	0.25	50	50	ENSMUST00000120095.8	ENSMUSG00000028391.17	Wdr31	chr4	protein_coding	WD repeat domain 31
chr4	62387170	62388970	-	62387170	62388949	A5SS	0.25	50	50	ENSMUST00000120095.8	ENSMUSG00000028391.17	Wdr31	chr4	protein_coding	WD repeat domain 31
chr4	62387170	62389056	-	62387170	62388949	A5SS	0.25	50	50	ENSMUST00000120095.8	ENSMUSG00000028391.17	Wdr31	chr4	protein_coding	WD repeat domain 31
chr4	62387170	62388880	-	62387170	62389056	A5SS	0.25	50	50	ENSMUST00000030087.14	ENSMUSG00000028391.17	Wdr31	chr4	protein_coding	WD repeat domain 31
chr4	62387170	62388970	-	62387170	62389056	A5SS	0.25	50	50	ENSMUST00000030087.14	ENSMUSG00000028391.17	Wdr31	chr4	protein_coding	WD repeat domain 31
chr4	62387170	62388880	-	62387170	62388970	A5SS	0.25	50	50	ENSMUST00000155522.8	ENSMUSG00000028391.17	Wdr31	chr4	protein_coding	WD repeat domain 31
chr4	62398674;62400096	62399912;62400855	+	62398674	62400855	cassetteExon	0.5	100	100	ENSMUST00000030088.12	ENSMUSG00000028392.16	Bspry	chr4	protein_coding	B-box and SPRY domain containing
chr4	62418330	62421544	-	62418330	62420395	5pMXE	0.5	50	50	ENSMUST00000037820.3	ENSMUSG00000038422.3	Hdhd3	chr4	protein_coding	haloacid dehalogenase-like hydrolase domain containing 3
chr4	62432497	62438032	-	62432497	62438097	A5SS	0.5	50	50	ENSMUST00000137448.2	ENSMUSG00000028393.11	Alad	chr4	protein_coding	aminolevulinate, delta-, dehydratase
chr4	62442673	62442847	-	62442673	62442987	A5SS	0.5	50	50	ENSMUST00000030091.10	ENSMUSG00000028394.10	Pole3	chr4	protein_coding	polymerase (DNA directed), epsilon 3 (p17 subunit)
chr4	62523783	62525846	+	62523783;62524838	62524744;62525846	ES	0.5	50	50	ENSMUST00000065870.14	ENSMUSG00000059810.19	Rgs3	chr4	protein_coding	regulator of G-protein signaling 3
chr4	62571073	62607736	+	62571073	62575340	3pMXE	0.5	50	50	ENSMUST00000065870.14	ENSMUSG00000059810.19	Rgs3	chr4	protein_coding	regulator of G-protein signaling 3
chr4	62501950	62521158	+	62500267	62521158	A5SS	0.5	50	50	ENSMUST00000065870.14	ENSMUSG00000059810.19	Rgs3	chr4	protein_coding	regulator of G-protein signaling 3
chr4	62522775	62523725	+	62521208	62523725	A5SS	0.5	50	50	ENSMUST00000065870.14	ENSMUSG00000059810.19	Rgs3	chr4	protein_coding	regulator of G-protein signaling 3
chr4	62538024	62542082	+	62535367	62542082	A5SS	0.33	50	50	ENSMUST00000065870.14	ENSMUSG00000059810.19	Rgs3	chr4	protein_coding	regulator of G-protein signaling 3
chr4	62541812	62542082	+	62535367	62542082	A5SS	0.33	50	50	ENSMUST00000065870.14	ENSMUSG00000059810.19	Rgs3	chr4	protein_coding	regulator of G-protein signaling 3
chr4	62543414	62543979	+	62543439	62543979	A5SS	0.5	50	50	ENSMUST00000065870.14	ENSMUSG00000059810.19	Rgs3	chr4	protein_coding	regulator of G-protein signaling 3
chr4	62541812	62542082	+	62538024	62542082	A5SS	0.33	50	50	ENSMUST00000084521.11	ENSMUSG00000059810.19	Rgs3	chr4	protein_coding	regulator of G-protein signaling 3
chr4	62582029	62607736	+	62571073	62607736	A5SS	0.2	50	50	ENSMUST00000084521.11	ENSMUSG00000059810.19	Rgs3	chr4	protein_coding	regulator of G-protein signaling 3
chr4	62587260	62607736	+	62571073	62607736	A5SS	0.2	50	50	ENSMUST00000084521.11	ENSMUSG00000059810.19	Rgs3	chr4	protein_coding	regulator of G-protein signaling 3
chr4	62592547	62607736	+	62571073	62607736	A5SS	0.2	50	50	ENSMUST00000084521.11	ENSMUSG00000059810.19	Rgs3	chr4	protein_coding	regulator of G-protein signaling 3
chr4	62592747	62607736	+	62571073	62607736	A5SS	0.2	50	50	ENSMUST00000084521.11	ENSMUSG00000059810.19	Rgs3	chr4	protein_coding	regulator of G-protein signaling 3
chr4	62618050	62618235	+	62615569	62618235	A5SS	0.33	50	50	ENSMUST00000084521.11	ENSMUSG00000059810.19	Rgs3	chr4	protein_coding	regulator of G-protein signaling 3
chr4	62618131	62618235	+	62615569	62618235	A5SS	0.33	50	50	ENSMUST00000084521.11	ENSMUSG00000059810.19	Rgs3	chr4	protein_coding	regulator of G-protein signaling 3
chr4	62618958	62619271	+	62618652	62619271	A5SS	0.5	50	50	ENSMUST00000084521.11	ENSMUSG00000059810.19	Rgs3	chr4	protein_coding	regulator of G-protein signaling 3
chr4	62587260	62607736	+	62582029	62607736	A5SS	0.2	50	50	ENSMUST00000126338.2	ENSMUSG00000059810.19	Rgs3	chr4	protein_coding	regulator of G-protein signaling 3
chr4	62592547	62607736	+	62582029	62607736	A5SS	0.2	50	50	ENSMUST00000126338.2	ENSMUSG00000059810.19	Rgs3	chr4	protein_coding	regulator of G-protein signaling 3
chr4	62592747	62607736	+	62582029	62607736	A5SS	0.2	50	50	ENSMUST00000126338.2	ENSMUSG00000059810.19	Rgs3	chr4	protein_coding	regulator of G-protein signaling 3
chr4	62592547	62607736	+	62587260	62607736	A5SS	0.2	50	50	ENSMUST00000124082.2	ENSMUSG00000059810.19	Rgs3	chr4	protein_coding	regulator of G-protein signaling 3
chr4	62592747	62607736	+	62587260	62607736	A5SS	0.2	50	50	ENSMUST00000124082.2	ENSMUSG00000059810.19	Rgs3	chr4	protein_coding	regulator of G-protein signaling 3
chr4	62592747	62607736	+	62592547	62607736	A5SS	0.2	50	50	ENSMUST00000107420.8	ENSMUSG00000059810.19	Rgs3	chr4	protein_coding	regulator of G-protein signaling 3
chr4	62618050	62618235	+	62618131	62618235	A5SS	0.33	50	50	ENSMUST00000125369.8	ENSMUSG00000059810.19	Rgs3	chr4	protein_coding	regulator of G-protein signaling 3
chr4	62883943	62979758	+	62883943;62952230	62952139;62979758	ES	0.5	50	50	ENSMUST00000030043.13	ENSMUSG00000028358.16	Zfp618	chr4	protein_coding	zinc finger protein 618
chr4	62998333	63007603	+	62998333;63004863	63004768;63007603	ES	0.5	50	50	ENSMUST00000030043.13	ENSMUSG00000028358.16	Zfp618	chr4	protein_coding	zinc finger protein 618
chr4	63021840	63036786	+	63021840	63033438	3pMXE	0.5	50	50	ENSMUST00000030043.13	ENSMUSG00000028358.16	Zfp618	chr4	protein_coding	zinc finger protein 618
chr4	63013791	63015128	+	63013791	63021751	A3SS	0.5	50	50	ENSMUST00000030043.13	ENSMUSG00000028358.16	Zfp618	chr4	protein_coding	zinc finger protein 618
chr4	63017532	63021751	+	63013791	63021751	A5SS	0.5	50	50	ENSMUST00000030043.13	ENSMUSG00000028358.16	Zfp618	chr4	protein_coding	zinc finger protein 618
chr4	63038682	63039568	+	63036866	63039568	A5SS	0.5	50	50	ENSMUST00000107415.8	ENSMUSG00000028358.16	Zfp618	chr4	protein_coding	zinc finger protein 618
chr4	63088029	63088925	-	63088029;63088803	63088668;63088925	ES	0.5	50	50	ENSMUST00000156618.9	ENSMUSG00000028357.14	Kif12	chr4	protein_coding	kinesin family member 12
chr4	63089466	63089889	-	63089466;63089668	63089556;63089889	ES	0.5	50	50	ENSMUST00000156618.9	ENSMUSG00000028357.14	Kif12	chr4	protein_coding	kinesin family member 12
chr4	63084744	63085171	-	63084747	63085171	A3SS	0.5	50	50	ENSMUST00000156618.9	ENSMUSG00000028357.14	Kif12	chr4	protein_coding	kinesin family member 12
chr4	63134118	63139253	+	63132641	63139253	A5SS	0.5	50	50	ENSMUST00000125504.8	ENSMUSG00000045672.16	Col27a1	chr4	protein_coding	collagen, type XXVII, alpha 1
chr4	63152740	63153567	+	63150082	63153567	A5SS	0.5	50	50	ENSMUST00000125504.8	ENSMUSG00000045672.16	Col27a1	chr4	protein_coding	collagen, type XXVII, alpha 1
chr4	63191348	63194165	+	63191340	63194165	A5SS	0.5	50	50	ENSMUST00000125504.8	ENSMUSG00000045672.16	Col27a1	chr4	protein_coding	collagen, type XXVII, alpha 1
chr4	63227866	63230927	+	63227866	63231663	A3SS	0.5	50	50	ENSMUST00000036300.13	ENSMUSG00000045672.16	Col27a1	chr4	protein_coding	collagen, type XXVII, alpha 1
chr4	63236274	63236429	+	63236274	63236499	A3SS	0.5	50	50	ENSMUST00000036300.13	ENSMUSG00000045672.16	Col27a1	chr4	protein_coding	collagen, type XXVII, alpha 1
chr4	63242218	63242631	+	63242218	63242668	A3SS	0.5	50	50	ENSMUST00000036300.13	ENSMUSG00000045672.16	Col27a1	chr4	protein_coding	collagen, type XXVII, alpha 1
chr4	63246132	63246769	+	63246132	63246772	A3SS	0.5	50	50	ENSMUST00000036300.13	ENSMUSG00000045672.16	Col27a1	chr4	protein_coding	collagen, type XXVII, alpha 1
chr4	63298599	63299063	-	63298599	63299965	A5SS	0.5	50	50	ENSMUST00000035724.5	ENSMUSG00000039158.12	Akna	chr4	protein_coding	AT-hook transcription factor
chr4	63350296	63413649	-	63350296	63350902	5pMXE	0.5	50	50	ENSMUST00000155058.8	ENSMUSG00000039137.19	Whrn	chr4	protein_coding	whirlin
chr4	63337730;63347355	63347323;63350087	-	63337730	63350087	cassetteExon	0.5	100	100	ENSMUST00000155058.8	ENSMUSG00000039137.19	Whrn	chr4	protein_coding	whirlin
chr4	63337730;63347654	63347323;63350087	-	63337730	63350087	cassetteExon	0.5	100	100	ENSMUST00000155058.8	ENSMUSG00000039137.19	Whrn	chr4	protein_coding	whirlin
chr4	63334827	63336325	-	63334830	63336325	A3SS	0.5	50	50	ENSMUST00000155058.8	ENSMUSG00000039137.19	Whrn	chr4	protein_coding	whirlin
chr4	63344272	63347323	-	63337730	63347323	A3SS	0.5	50	50	ENSMUST00000145133.8	ENSMUSG00000039137.19	Whrn	chr4	protein_coding	whirlin
chr4	63347355	63350087	-	63347654	63350087	A3SS	0.33	50	50	ENSMUST00000145133.8	ENSMUSG00000039137.19	Whrn	chr4	protein_coding	whirlin
chr4	63391105	63412850	-	63391105	63411774	5pMXE	0.5	50	50	ENSMUST00000124016.8	ENSMUSG00000039137.19	Whrn	chr4	protein_coding	whirlin
chr4	63354838	63379519	-	63353799	63379519	A3SS	0.33	50	50	ENSMUST00000124016.8	ENSMUSG00000039137.19	Whrn	chr4	protein_coding	whirlin
chr4	63378704	63379519	-	63353799	63379519	A3SS	0.33	50	50	ENSMUST00000124016.8	ENSMUSG00000039137.19	Whrn	chr4	protein_coding	whirlin
chr4	63352383	63353585	-	63352383	63353597	A5SS	0.5	50	50	ENSMUST00000124016.8	ENSMUSG00000039137.19	Whrn	chr4	protein_coding	whirlin
chr4	63351114	63413649	-	63351114	63352347	A5SS&ES	0.5	50	50	ENSMUST00000063650.10	ENSMUSG00000039137.19	Whrn	chr4	protein_coding	whirlin
chr4	63347355;63347654	63347470;63350087	-	63347355	63350087	cassetteExon	0.5	100	100	ENSMUST00000084510.8	ENSMUSG00000039137.19	Whrn	chr4	protein_coding	whirlin
chr4	63350296	63413649	-	63350296;63351114	63350902;63413649	ES	0.5	50	50	ENSMUST00000095038.8	ENSMUSG00000039137.19	Whrn	chr4	protein_coding	whirlin
chr4	63378704	63379519	-	63354838	63379519	A3SS	0.33	50	50	ENSMUST00000144965.8	ENSMUSG00000039137.19	Whrn	chr4	protein_coding	whirlin
chr4	63477194	63479119	+	63477194	63479149	A3SS	0.5	50	50	ENSMUST00000077709.11	ENSMUSG00000045917.18	Tmem268	chr4	protein_coding	transmembrane protein 268
chr4	63478642	63479149	+	63477194	63479149	A5SS	0.5	50	50	ENSMUST00000077709.11	ENSMUSG00000045917.18	Tmem268	chr4	protein_coding	transmembrane protein 268
chr4	63478642	63479119	+	63477194	63479119	A5SS	0.5	50	50	ENSMUST00000126738.8	ENSMUSG00000045917.18	Tmem268	chr4	protein_coding	transmembrane protein 268
chr4	63478642	63479149	+	63478642	63479119	A3SS	0.5	50	50	ENSMUST00000124332.8	ENSMUSG00000045917.18	Tmem268	chr4	protein_coding	transmembrane protein 268
chr4	63515459	63523339	-	63515459	63518800	5pMXE	0.5	50	50	ENSMUST00000210529.2	ENSMUSG00000084782.3	Gm11213	chr4	protein_coding	predicted gene 11213
chr4	63530777	63540643	-	63530777	63540626	A5SS	0.5	50	50	ENSMUST00000102861.8	ENSMUSG00000058935.15	Tex48	chr4	protein_coding	testis expressed 48
chr4	63901160;63902969	63902697;63911264	-	63901160	63911264	cassetteExon	0.5	100	100	ENSMUST00000030056.12	ENSMUSG00000028364.16	Tnc	chr4	protein_coding	tenascin C
chr4	63898226	63900850	+	63898226	63942213	A3SS	0.5	50	50	ENSMUST00000141428.8	ENSMUSG00000073821.12	8030451A03Rik	chr4	lncRNA	RIKEN cDNA 8030451A03 gene
chr4	63942310	63967307	+	63942310	63997603	A3SS	0.5	50	50	ENSMUST00000141428.8	ENSMUSG00000073821.12	8030451A03Rik	chr4	lncRNA	RIKEN cDNA 8030451A03 gene
chr4	65977474;66037449	66037294;66103361	-	65977474	66103361	cassetteExon	0.5	100	100	ENSMUST00000084496.3	ENSMUSG00000028373.17	Astn2	chr4	protein_coding	astrotactin 2
chr4	65523306	65531369	+	65523306	65531366	A3SS	0.5	50	50	ENSMUST00000050850.14	ENSMUSG00000051675.14	Trim32	chr4	protein_coding	tripartite motif-containing 32
chr4	65523513	65531366	+	65523306	65531366	A5SS	0.5	50	50	ENSMUST00000050850.14	ENSMUSG00000051675.14	Trim32	chr4	protein_coding	tripartite motif-containing 32
chr4	65523520	65531369	+	65523306	65531369	A5SS	0.5	50	50	ENSMUST00000107366.2	ENSMUSG00000051675.14	Trim32	chr4	protein_coding	tripartite motif-containing 32
chr4	66746158	66757466	+	66746158;66752297	66752131;66757466	ES	0.5	50	50	ENSMUST00000048096.12	ENSMUSG00000039005.14	Tlr4	chr4	protein_coding	toll-like receptor 4
chr4	66752297	66842603	+	66752297	66757466	3pMXE	0.5	50	50	ENSMUST00000048096.12	ENSMUSG00000039005.14	Tlr4	chr4	protein_coding	toll-like receptor 4
chr4	66746527	66752131	+	66746158	66752131	A5SS	0.5	50	50	ENSMUST00000048096.12	ENSMUSG00000039005.14	Tlr4	chr4	protein_coding	toll-like receptor 4
chr4	66746158	66757466	+	66746158	66752131	A3SS&ES	0.5	50	50	ENSMUST00000107365.3	ENSMUSG00000039005.14	Tlr4	chr4	protein_coding	toll-like receptor 4
chr4	70235834	70267381	-	70235834;70255796	70255578;70267381	ES	0.5	50	50	ENSMUST00000144099.8	ENSMUSG00000039298.17	Cdk5rap2	chr4	protein_coding	CDK5 regulatory subunit associated protein 2
chr4	70163734;70165211	70165185;70168590	-	70163734	70168590	cassetteExon	0.5	100	100	ENSMUST00000144099.8	ENSMUSG00000039298.17	Cdk5rap2	chr4	protein_coding	CDK5 regulatory subunit associated protein 2
chr4	70167735	70168590	-	70163734	70168590	A3SS	0.33	50	50	ENSMUST00000144099.8	ENSMUSG00000039298.17	Cdk5rap2	chr4	protein_coding	CDK5 regulatory subunit associated protein 2
chr4	70317503	70319482	-	70298538	70319482	A3SS	0.33	50	50	ENSMUST00000144099.8	ENSMUSG00000039298.17	Cdk5rap2	chr4	protein_coding	CDK5 regulatory subunit associated protein 2
chr4	70298538	70319482	-	70282367	70319482	A3SS	0.33	50	50	ENSMUST00000076541.13	ENSMUSG00000039298.17	Cdk5rap2	chr4	protein_coding	CDK5 regulatory subunit associated protein 2
chr4	70317503	70319482	-	70282367	70319482	A3SS	0.33	50	50	ENSMUST00000076541.13	ENSMUSG00000039298.17	Cdk5rap2	chr4	protein_coding	CDK5 regulatory subunit associated protein 2
chr4	70282367	70295030	-	70282367	70319482	A5SS	0.5	50	50	ENSMUST00000076541.13	ENSMUSG00000039298.17	Cdk5rap2	chr4	protein_coding	CDK5 regulatory subunit associated protein 2
chr4	70167735	70168590	-	70165211	70168590	A3SS	0.33	50	50	ENSMUST00000138561.8	ENSMUSG00000039298.17	Cdk5rap2	chr4	protein_coding	CDK5 regulatory subunit associated protein 2
chr4	70381743	70406368	-	70374237	70406368	A3SS	0.5	50	50	ENSMUST00000107359.9	ENSMUSG00000039270.10	Megf9	chr4	protein_coding	multiple EGF-like-domains 9
chr4	72056925;72057300	72057199;72057926	-	72056925	72057926	cassetteExon	0.5	100	100	ENSMUST00000074216.14	ENSMUSG00000008305.19	Tle1	chr4	protein_coding	transducin-like enhancer of split 1
chr4	72063657;72075716	72075700;72076450	-	72063657;72071134	72071118;72076450	MXE	0.5	100	100	ENSMUST00000074216.14	ENSMUSG00000008305.19	Tle1	chr4	protein_coding	transducin-like enhancer of split 1
chr4	72056922	72057926	-	72056925	72057926	A3SS	0.33	50	50	ENSMUST00000074216.14	ENSMUSG00000008305.19	Tle1	chr4	protein_coding	transducin-like enhancer of split 1
chr4	72117658	72118219	-	72117634	72118219	A3SS	0.5	50	50	ENSMUST00000074216.14	ENSMUSG00000008305.19	Tle1	chr4	protein_coding	transducin-like enhancer of split 1
chr4	72076654	72087329	-	72076654	72087359	A5SS	0.5	50	50	ENSMUST00000074216.14	ENSMUSG00000008305.19	Tle1	chr4	protein_coding	transducin-like enhancer of split 1
chr4	72057300	72057926	-	72056922	72057926	A3SS	0.33	50	50	ENSMUST00000102848.9	ENSMUSG00000008305.19	Tle1	chr4	protein_coding	transducin-like enhancer of split 1
chr4	73321352	73321631	-	73319687	73321631	A3SS	0.5	50	50	ENSMUST00000147434.7	ENSMUSG00000066137.13	Gm11487	chr4	protein_coding	predicted gene 11487
chr4	73319687	73319991	-	73319687	73321631	A5SS	0.5	50	50	ENSMUST00000147434.7	ENSMUSG00000066137.13	Gm11487	chr4	protein_coding	predicted gene 11487
chr4	73689669	73707982	-	73689669	73698562	A5SS&ES	0.5	50	50	ENSMUST00000058292.13	ENSMUSG00000043003.15	Rasef	chr4	protein_coding	RAS and EF hand domain containing
chr4	73689669	73708891	-	73689669	73707982	A5SS&ES	0.33	50	50	ENSMUST00000102837.3	ENSMUSG00000043003.15	Rasef	chr4	protein_coding	RAS and EF hand domain containing
chr4	73689669	73698562	-	73689669	73708891	A5SS	0.33	50	50	ENSMUST00000222414.2	ENSMUSG00000043003.15	Rasef	chr4	protein_coding	RAS and EF hand domain containing
chr4	73792539	73792818	-	73790874	73792818	A3SS	0.5	50	50	ENSMUST00000107326.2	ENSMUSG00000096530.8	Gm11758	chr4	protein_coding	predicted gene 11758
chr4	73790874	73791180	-	73790874	73792818	A5SS	0.5	50	50	ENSMUST00000107326.2	ENSMUSG00000096530.8	Gm11758	chr4	protein_coding	predicted gene 11758
chr4	73807385	73807664	-	73805720	73807664	A3SS	0.5	50	50	ENSMUST00000107320.3	ENSMUSG00000096750.8	Gm11757	chr4	protein_coding	predicted gene 11757
chr4	73805720	73806026	-	73805720	73807664	A5SS	0.5	50	50	ENSMUST00000107320.3	ENSMUSG00000096750.8	Gm11757	chr4	protein_coding	predicted gene 11757
chr4	73822226	73822505	-	73820561	73822505	A3SS	0.5	50	50	ENSMUST00000107318.2	ENSMUSG00000096333.8	Gm13871	chr4	protein_coding	predicted gene 13871
chr4	73820561	73820867	-	73820561	73822505	A5SS	0.5	50	50	ENSMUST00000107318.2	ENSMUSG00000096333.8	Gm13871	chr4	protein_coding	predicted gene 13871
chr4	73837047	73837326	-	73835382	73837326	A3SS	0.5	50	50	ENSMUST00000107312.2	ENSMUSG00000093962.8	Gm11756	chr4	protein_coding	predicted gene 11756
chr4	73835382	73835688	-	73835382	73837326	A5SS	0.5	50	50	ENSMUST00000107312.2	ENSMUSG00000093962.8	Gm11756	chr4	protein_coding	predicted gene 11756
chr4	73857835	73861016	-	73857835	73859839	5pMXE	0.5	50	50	ENSMUST00000149981.2	ENSMUSG00000028396.6	2310002L09Rik	chr4	protein_coding	RIKEN cDNA 2310002L09 gene
chr4	74181206;74182042	74181957;74189431	+	74181206	74189431	cassetteExon	0.5	100	100	ENSMUST00000077851.10	ENSMUSG00000028397.14	Kdm4c	chr4	protein_coding	lysine (K)-specific demethylase 4C
chr4	74181206	74187474	+	74181206	74189431	A3SS	0.25	50	50	ENSMUST00000077851.10	ENSMUSG00000028397.14	Kdm4c	chr4	protein_coding	lysine (K)-specific demethylase 4C
chr4	74189606	74191658	+	74189606	74199134	A3SS	0.5	50	50	ENSMUST00000077851.10	ENSMUSG00000028397.14	Kdm4c	chr4	protein_coding	lysine (K)-specific demethylase 4C
chr4	74170323	74181046	+	74160877	74181046	A5SS	0.5	50	50	ENSMUST00000077851.10	ENSMUSG00000028397.14	Kdm4c	chr4	protein_coding	lysine (K)-specific demethylase 4C
chr4	74181206	74181957	+	74181206	74248892	A3SS	0.25	50	50	ENSMUST00000149295.2	ENSMUSG00000028397.14	Kdm4c	chr4	protein_coding	lysine (K)-specific demethylase 4C
chr4	74181206	74187474	+	74181206	74248892	A3SS	0.25	50	50	ENSMUST00000149295.2	ENSMUSG00000028397.14	Kdm4c	chr4	protein_coding	lysine (K)-specific demethylase 4C
chr4	74181206	74189431	+	74181206	74248892	A3SS	0.25	50	50	ENSMUST00000149295.2	ENSMUSG00000028397.14	Kdm4c	chr4	protein_coding	lysine (K)-specific demethylase 4C
chr4	74233886	74248892	+	74181206	74248892	A5SS	0.5	50	50	ENSMUST00000149295.2	ENSMUSG00000028397.14	Kdm4c	chr4	protein_coding	lysine (K)-specific demethylase 4C
chr4	74181206	74181957	+	74181206	74187474	A3SS	0.25	50	50	ENSMUST00000148753.8	ENSMUSG00000028397.14	Kdm4c	chr4	protein_coding	lysine (K)-specific demethylase 4C
chr4	76009776	76017649	-	76009776;76013783	76013757;76017649	ES	0.5	50	50	ENSMUST00000107289.9	ENSMUSG00000028399.19	Ptprd	chr4	protein_coding	protein tyrosine phosphatase, receptor type, D
chr4	76051569	76055048	-	76051569;76053793	76053782;76055048	ES	0.5	50	50	ENSMUST00000107289.9	ENSMUSG00000028399.19	Ptprd	chr4	protein_coding	protein tyrosine phosphatase, receptor type, D
chr4	76055158	76057531	-	76055158;76056810	76056793;76057531	ES	0.5	50	50	ENSMUST00000107289.9	ENSMUSG00000028399.19	Ptprd	chr4	protein_coding	protein tyrosine phosphatase, receptor type, D
chr4	76056810	76058751	-	76056810;76057539	76057531;76058751	ES	0.25	50	50	ENSMUST00000107289.9	ENSMUSG00000028399.19	Ptprd	chr4	protein_coding	protein tyrosine phosphatase, receptor type, D
chr4	76243582	76512504	-	76243582	76367880	5pMXE	0.33	50	50	ENSMUST00000107289.9	ENSMUSG00000028399.19	Ptprd	chr4	protein_coding	protein tyrosine phosphatase, receptor type, D
chr4	75957615;75958158	75958117;75968564	-	75957615	75968564	cassetteExon	0.5	100	100	ENSMUST00000107289.9	ENSMUSG00000028399.19	Ptprd	chr4	protein_coding	protein tyrosine phosphatase, receptor type, D
chr4	75957615;75959736	75959617;75968564	-	75957615	75968564	cassetteExon	0.5	100	100	ENSMUST00000107289.9	ENSMUSG00000028399.19	Ptprd	chr4	protein_coding	protein tyrosine phosphatase, receptor type, D
chr4	75968676;75972837	75972826;75977906	-	75968676	75977906	cassetteExon	0.5	100	100	ENSMUST00000107289.9	ENSMUSG00000028399.19	Ptprd	chr4	protein_coding	protein tyrosine phosphatase, receptor type, D
chr4	75968676;75972840	75972826;75977906	-	75968676	75977906	cassetteExon	0.5	100	100	ENSMUST00000107289.9	ENSMUSG00000028399.19	Ptprd	chr4	protein_coding	protein tyrosine phosphatase, receptor type, D
chr4	76003798	76004249	-	76003795	76004249	A3SS	0.5	50	50	ENSMUST00000107289.9	ENSMUSG00000028399.19	Ptprd	chr4	protein_coding	protein tyrosine phosphatase, receptor type, D
chr4	76018867	76021192	-	76018989	76021192	A3SS	0.33	50	50	ENSMUST00000107289.9	ENSMUSG00000028399.19	Ptprd	chr4	protein_coding	protein tyrosine phosphatase, receptor type, D
chr4	76058649	76058751	-	76057539	76058751	A3SS	0.25	50	50	ENSMUST00000107289.9	ENSMUSG00000028399.19	Ptprd	chr4	protein_coding	protein tyrosine phosphatase, receptor type, D
chr4	76051569	76051922	-	76051569	76053782	A5SS	0.33	50	50	ENSMUST00000107289.9	ENSMUSG00000028399.19	Ptprd	chr4	protein_coding	protein tyrosine phosphatase, receptor type, D
chr4	76243582	76262403	-	76243582	76367880	A5SS	0.33	50	50	ENSMUST00000107289.9	ENSMUSG00000028399.19	Ptprd	chr4	protein_coding	protein tyrosine phosphatase, receptor type, D
chr4	76018867	76021192	-	76003795	76021192	A3SS	0.33	50	50	ENSMUST00000102834.8	ENSMUSG00000028399.19	Ptprd	chr4	protein_coding	protein tyrosine phosphatase, receptor type, D
chr4	76018989	76021192	-	76003795	76021192	A3SS	0.33	50	50	ENSMUST00000102834.8	ENSMUSG00000028399.19	Ptprd	chr4	protein_coding	protein tyrosine phosphatase, receptor type, D
chr4	76003795	76004249	-	76003795	76021192	A5SS	0.5	50	50	ENSMUST00000102834.8	ENSMUSG00000028399.19	Ptprd	chr4	protein_coding	protein tyrosine phosphatase, receptor type, D
chr4	76243582	76262403	-	76243582	76512504	A5SS	0.33	50	50	ENSMUST00000173376.8	ENSMUSG00000028399.19	Ptprd	chr4	protein_coding	protein tyrosine phosphatase, receptor type, D
chr4	75972840	75977906	-	75972837	75977906	A3SS	0.33	50	50	ENSMUST00000174831.8	ENSMUSG00000028399.19	Ptprd	chr4	protein_coding	protein tyrosine phosphatase, receptor type, D
chr4	76055158	76058751	-	76055158;76056810	76056793;76058751	ES	0.25	50	50	ENSMUST00000174023.8	ENSMUSG00000028399.19	Ptprd	chr4	protein_coding	protein tyrosine phosphatase, receptor type, D
chr4	76055158;76057539	76057531;76058751	-	76055158;76056810	76056793;76058751	MXE	0.5	100	100	ENSMUST00000174023.8	ENSMUSG00000028399.19	Ptprd	chr4	protein_coding	protein tyrosine phosphatase, receptor type, D
chr4	76058649	76058751	-	76056810	76058751	A3SS	0.25	50	50	ENSMUST00000174023.8	ENSMUSG00000028399.19	Ptprd	chr4	protein_coding	protein tyrosine phosphatase, receptor type, D
chr4	76055158	76058751	-	76055158;76057539	76057531;76058751	ES	0.25	50	50	ENSMUST00000174531.8	ENSMUSG00000028399.19	Ptprd	chr4	protein_coding	protein tyrosine phosphatase, receptor type, D
chr4	76058649	76058751	-	76055158	76058751	A3SS	0.25	50	50	ENSMUST00000174180.8	ENSMUSG00000028399.19	Ptprd	chr4	protein_coding	protein tyrosine phosphatase, receptor type, D
chr4	76051569	76051922	-	76051569	76055048	A5SS	0.33	50	50	ENSMUST00000174180.8	ENSMUSG00000028399.19	Ptprd	chr4	protein_coding	protein tyrosine phosphatase, receptor type, D
chr4	75957615;75959736	75959617;75968564	-	75957615;75958158	75958117;75968564	MXE	0.5	100	100	ENSMUST00000050757.16	ENSMUSG00000028399.19	Ptprd	chr4	protein_coding	protein tyrosine phosphatase, receptor type, D
chr4	77253685	77466647	-	77253685;77288378	77288337;77466647	ES	0.5	50	50	ENSMUST00000107287.9	ENSMUSG00000028399.19	Ptprd	chr4	protein_coding	protein tyrosine phosphatase, receptor type, D
chr4	77271004	77288337	-	77253685	77288337	A3SS	0.5	50	50	ENSMUST00000107287.9	ENSMUSG00000028399.19	Ptprd	chr4	protein_coding	protein tyrosine phosphatase, receptor type, D
chr4	77836593	77843747	-	77550616	77843747	A3SS	0.5	50	50	ENSMUST00000107287.9	ENSMUSG00000028399.19	Ptprd	chr4	protein_coding	protein tyrosine phosphatase, receptor type, D
chr4	78578384	78578496	-	78578384	78579278	A5SS	0.33	50	50	ENSMUST00000132470.2	ENSMUSG00000085840.2	Gm11261	chr4	lncRNA	predicted gene 11261
chr4	78578384	78579289	-	78578384	78579278	A5SS	0.33	50	50	ENSMUST00000132470.2	ENSMUSG00000085840.2	Gm11261	chr4	lncRNA	predicted gene 11261
chr4	78578384	78578496	-	78578384	78579289	A5SS	0.33	50	50	ENSMUST00000123051.2	ENSMUSG00000085840.2	Gm11261	chr4	lncRNA	predicted gene 11261
chr4	80752632	80753226	+	80752638	80753226	A5SS	0.33	50	50	ENSMUST00000133655.8	ENSMUSG00000005994.15	Tyrp1	chr4	protein_coding	tyrosinase-related protein 1
chr4	80752653	80753226	+	80752638	80753226	A5SS	0.33	50	50	ENSMUST00000133655.8	ENSMUSG00000005994.15	Tyrp1	chr4	protein_coding	tyrosinase-related protein 1
chr4	80768113	80769019	+	80768113	80768916	A3SS	0.5	50	50	ENSMUST00000006151.13	ENSMUSG00000005994.15	Tyrp1	chr4	protein_coding	tyrosinase-related protein 1
chr4	80752632	80753226	+	80752653	80753226	A5SS	0.33	50	50	ENSMUST00000006151.13	ENSMUSG00000005994.15	Tyrp1	chr4	protein_coding	tyrosinase-related protein 1
chr4	81201674	81203700	-	81201674;81202936	81202814;81203700	ES	0.5	50	50	ENSMUST00000107262.8	ENSMUSG00000028402.19	Mpdz	chr4	protein_coding	multiple PDZ domain crumbs cell polarity complex component
chr4	81210849	81211717	-	81210849;81211081	81210998;81211717	ES	0.5	50	50	ENSMUST00000107262.8	ENSMUSG00000028402.19	Mpdz	chr4	protein_coding	multiple PDZ domain crumbs cell polarity complex component
chr4	81228556	81235831	-	81228556;81231835	81231737;81235831	ES	0.5	50	50	ENSMUST00000107262.8	ENSMUSG00000028402.19	Mpdz	chr4	protein_coding	multiple PDZ domain crumbs cell polarity complex component
chr4	81238760	81247664	-	81238760;81245197	81245102;81247664	ES	0.33	50	50	ENSMUST00000107262.8	ENSMUSG00000028402.19	Mpdz	chr4	protein_coding	multiple PDZ domain crumbs cell polarity complex component
chr4	81274734	81278241	-	81274734;81276979	81276863;81278241	ES	0.5	50	50	ENSMUST00000107262.8	ENSMUSG00000028402.19	Mpdz	chr4	protein_coding	multiple PDZ domain crumbs cell polarity complex component
chr4	81247768;81251255	81251214;81253913	-	81247768	81253913	cassetteExon	0.5	100	100	ENSMUST00000107262.8	ENSMUSG00000028402.19	Mpdz	chr4	protein_coding	multiple PDZ domain crumbs cell polarity complex component
chr4	81245194	81247664	-	81245197	81247664	A3SS	0.33	50	50	ENSMUST00000107262.8	ENSMUSG00000028402.19	Mpdz	chr4	protein_coding	multiple PDZ domain crumbs cell polarity complex component
chr4	81228556	81238583	-	81228556;81235941	81235831;81238583	ES	0.5	50	50	ENSMUST00000107258.9	ENSMUSG00000028402.19	Mpdz	chr4	protein_coding	multiple PDZ domain crumbs cell polarity complex component
chr4	81238760	81247664	-	81238760;81245194	81245102;81247664	ES	0.33	50	50	ENSMUST00000107258.9	ENSMUSG00000028402.19	Mpdz	chr4	protein_coding	multiple PDZ domain crumbs cell polarity complex component
chr4	81201674	81203700	-	81202936	81203700	A3SS	0.5	50	50	ENSMUST00000131418.2	ENSMUSG00000028402.19	Mpdz	chr4	protein_coding	multiple PDZ domain crumbs cell polarity complex component
chr4	81201674	81203700	-	81201674	81202814	5pMXE	0.5	50	50	ENSMUST00000156441.8	ENSMUSG00000028402.19	Mpdz	chr4	protein_coding	multiple PDZ domain crumbs cell polarity complex component
chr4	81210849	81211717	-	81210849	81210998	5pMXE	0.5	50	50	ENSMUST00000129732.2	ENSMUSG00000028402.19	Mpdz	chr4	protein_coding	multiple PDZ domain crumbs cell polarity complex component
chr4	81238760	81247664	-	81238760	81245102	5pMXE	0.5	50	50	ENSMUST00000131197.4	ENSMUSG00000028402.19	Mpdz	chr4	protein_coding	multiple PDZ domain crumbs cell polarity complex component
chr4	81228556	81231737	-	81228556	81238583	A5SS	0.33	50	50	ENSMUST00000131197.4	ENSMUSG00000028402.19	Mpdz	chr4	protein_coding	multiple PDZ domain crumbs cell polarity complex component
chr4	81247768	81253913	-	81247768	81251214	5pMXE	0.5	50	50	ENSMUST00000125288.8	ENSMUSG00000028402.19	Mpdz	chr4	protein_coding	multiple PDZ domain crumbs cell polarity complex component
chr4	81984277	82020694	+	81984277;81995736	81995671;82020694	ES	0.5	50	50	ENSMUST00000137810.3	ENSMUSG00000085022.3	Gm5860	chr4	lncRNA	predicted gene 5860
chr4	82215048	82238711	-	82215048;82228628	82228540;82238711	ES	0.5	50	50	ENSMUST00000050872.15	ENSMUSG00000008575.18	Nfib	chr4	protein_coding	nuclear factor I/B
chr4	82417006	82623752	-	82417006	82422968	5pMXE	0.33	50	50	ENSMUST00000050872.15	ENSMUSG00000008575.18	Nfib	chr4	protein_coding	nuclear factor I/B
chr4	82238793	82241809	-	82238793	82241782	A5SS	0.5	50	50	ENSMUST00000050872.15	ENSMUSG00000008575.18	Nfib	chr4	protein_coding	nuclear factor I/B
chr4	82417006	82417401	-	82417006	82422968	A5SS	0.33	50	50	ENSMUST00000050872.15	ENSMUSG00000008575.18	Nfib	chr4	protein_coding	nuclear factor I/B
chr4	82215048;82228628	82228540;82245966	-	82215048;82241947	82238711;82245966	MXE	0.5	100	100	ENSMUST00000107245.9	ENSMUSG00000008575.18	Nfib	chr4	protein_coding	nuclear factor I/B
chr4	82215048;82228628	82228540;82245966	-	82215048	82245966	cassetteExon	0.5	100	100	ENSMUST00000064770.9	ENSMUSG00000008575.18	Nfib	chr4	protein_coding	nuclear factor I/B
chr4	82241947	82245966	-	82215048	82245966	A3SS	0.33	50	50	ENSMUST00000064770.9	ENSMUSG00000008575.18	Nfib	chr4	protein_coding	nuclear factor I/B
chr4	82215048	82238711	-	82215048	82245966	A5SS	0.33	50	50	ENSMUST00000064770.9	ENSMUSG00000008575.18	Nfib	chr4	protein_coding	nuclear factor I/B
chr4	82241947	82245966	-	82228628	82245966	A3SS	0.33	50	50	ENSMUST00000107246.2	ENSMUSG00000008575.18	Nfib	chr4	protein_coding	nuclear factor I/B
chr4	82215048	82238711	-	82215048	82228540	A5SS&ES	0.33	50	50	ENSMUST00000107246.2	ENSMUSG00000008575.18	Nfib	chr4	protein_coding	nuclear factor I/B
chr4	82228628	82238711	-	82228628	82245966	A5SS	0.5	50	50	ENSMUST00000107246.2	ENSMUSG00000008575.18	Nfib	chr4	protein_coding	nuclear factor I/B
chr4	82417006	82417401	-	82417006	82623752	A5SS	0.33	50	50	ENSMUST00000155821.2	ENSMUSG00000008575.18	Nfib	chr4	protein_coding	nuclear factor I/B
chr4	82738683	82756513	-	82738683;82753821	82753683;82756513	ES	0.5	50	50	ENSMUST00000030110.15	ENSMUSG00000028403.16	Zdhhc21	chr4	protein_coding	zinc finger, DHHC domain containing 21
chr4	82772352	82778156	-	82772352	82777727	5pMXE	0.33	50	50	ENSMUST00000030110.15	ENSMUSG00000028403.16	Zdhhc21	chr4	protein_coding	zinc finger, DHHC domain containing 21
chr4	82772352;82775221	82775061;82777727	-	82772352	82777727	cassetteExon	0.5	100	100	ENSMUST00000030110.15	ENSMUSG00000028403.16	Zdhhc21	chr4	protein_coding	zinc finger, DHHC domain containing 21
chr4	82765976	82768780	-	82765976	82772206	A5SS	0.5	50	50	ENSMUST00000030110.15	ENSMUSG00000028403.16	Zdhhc21	chr4	protein_coding	zinc finger, DHHC domain containing 21
chr4	82772352	82775061	-	82772352	82778156	A5SS	0.33	50	50	ENSMUST00000107239.8	ENSMUSG00000028403.16	Zdhhc21	chr4	protein_coding	zinc finger, DHHC domain containing 21
chr4	82859017	82868481	-	82858964	82868481	A3SS	0.5	50	50	ENSMUST00000170248.9	ENSMUSG00000059049.15	Frem1	chr4	protein_coding	Fras1 related extracellular matrix protein 1
chr4	82909868	82911039	-	82909811	82911039	A3SS	0.5	50	50	ENSMUST00000170248.9	ENSMUSG00000059049.15	Frem1	chr4	protein_coding	Fras1 related extracellular matrix protein 1
chr4	82924107	82930099	-	82924114	82930099	A3SS	0.33	50	50	ENSMUST00000170248.9	ENSMUSG00000059049.15	Frem1	chr4	protein_coding	Fras1 related extracellular matrix protein 1
chr4	82924111	82930099	-	82924114	82930099	A3SS	0.33	50	50	ENSMUST00000170248.9	ENSMUSG00000059049.15	Frem1	chr4	protein_coding	Fras1 related extracellular matrix protein 1
chr4	82924107	82930099	-	82924111	82930099	A3SS	0.33	50	50	ENSMUST00000071708.12	ENSMUSG00000059049.15	Frem1	chr4	protein_coding	Fras1 related extracellular matrix protein 1
chr4	82939339	82970138	-	82939339	82970137	A5SS	0.5	50	50	ENSMUST00000107230.8	ENSMUSG00000059049.15	Frem1	chr4	protein_coding	Fras1 related extracellular matrix protein 1
chr4	83177703	83179119	-	83174349	83179119	A3SS	0.5	50	50	ENSMUST00000102823.10	ENSMUSG00000038172.15	Ttc39b	chr4	protein_coding	tetratricopeptide repeat domain 39B
chr4	83182038	83184210	-	83182038	83189354	A5SS	0.5	50	50	ENSMUST00000102823.10	ENSMUSG00000038172.15	Ttc39b	chr4	protein_coding	tetratricopeptide repeat domain 39B
chr4	83189455	83197475	-	83189455	83216165	A5SS	0.33	50	50	ENSMUST00000102823.10	ENSMUSG00000038172.15	Ttc39b	chr4	protein_coding	tetratricopeptide repeat domain 39B
chr4	83189455	83203145	-	83189455	83216165	A5SS	0.33	50	50	ENSMUST00000102823.10	ENSMUSG00000038172.15	Ttc39b	chr4	protein_coding	tetratricopeptide repeat domain 39B
chr4	83189455	83197475	-	83189455	83203145	A5SS	0.33	50	50	ENSMUST00000150522.8	ENSMUSG00000038172.15	Ttc39b	chr4	protein_coding	tetratricopeptide repeat domain 39B
chr4	83337020	83353428	+	83337020;83346103	83346019;83353428	ES	0.5	50	50	ENSMUST00000030206.10	ENSMUSG00000028483.14	Snapc3	chr4	protein_coding	small nuclear RNA activating complex, polypeptide 3
chr4	83372385	83384202	+	83372385	83378400	3pMXE	0.33	50	50	ENSMUST00000123262.8	ENSMUSG00000028483.14	Snapc3	chr4	protein_coding	small nuclear RNA activating complex, polypeptide 3
chr4	83372385	83373252	+	83372385	83378400	A3SS	0.33	50	50	ENSMUST00000123262.8	ENSMUSG00000028483.14	Snapc3	chr4	protein_coding	small nuclear RNA activating complex, polypeptide 3
chr4	83372385;83373288	83373252;83384202	+	83372385	83384202	cassetteExon	0.5	100	100	ENSMUST00000124856.8	ENSMUSG00000028483.14	Snapc3	chr4	protein_coding	small nuclear RNA activating complex, polypeptide 3
chr4	83372385;83378596	83378400;83384202	+	83372385	83384202	cassetteExon	0.5	100	100	ENSMUST00000124856.8	ENSMUSG00000028483.14	Snapc3	chr4	protein_coding	small nuclear RNA activating complex, polypeptide 3
chr4	83372385;83373288	83373252;83384202	+	83372385;83378596	83378400;83384202	MXE	0.5	100	100	ENSMUST00000159518.2	ENSMUSG00000028483.14	Snapc3	chr4	protein_coding	small nuclear RNA activating complex, polypeptide 3
chr4	83380411	83381832	-	83379478	83381832	A3SS	0.25	50	50	ENSMUST00000030207.15	ENSMUSG00000028484.17	Psip1	chr4	protein_coding	PC4 and SFRS1 interacting protein 1
chr4	83380710	83381832	-	83379478	83381832	A3SS	0.25	50	50	ENSMUST00000030207.15	ENSMUSG00000028484.17	Psip1	chr4	protein_coding	PC4 and SFRS1 interacting protein 1
chr4	83380790	83381832	-	83379478	83381832	A3SS	0.25	50	50	ENSMUST00000030207.15	ENSMUSG00000028484.17	Psip1	chr4	protein_coding	PC4 and SFRS1 interacting protein 1
chr4	83380710	83381832	-	83380411	83381832	A3SS	0.25	50	50	ENSMUST00000126706.8	ENSMUSG00000028484.17	Psip1	chr4	protein_coding	PC4 and SFRS1 interacting protein 1
chr4	83380790	83381832	-	83380411	83381832	A3SS	0.25	50	50	ENSMUST00000126706.8	ENSMUSG00000028484.17	Psip1	chr4	protein_coding	PC4 and SFRS1 interacting protein 1
chr4	83380710	83381832	-	83380790	83381832	A3SS	0.25	50	50	ENSMUST00000107214.9	ENSMUSG00000028484.17	Psip1	chr4	protein_coding	PC4 and SFRS1 interacting protein 1
chr4	83522419	83553877	+	83522419;83539200	83539062;83553877	ES	0.5	50	50	ENSMUST00000053414.13	ENSMUSG00000052407.18	Ccdc171	chr4	protein_coding	coiled-coil domain containing 171
chr4	83468014;83472601	83472515;83472931	+	83468014	83472931	cassetteExon	0.5	100	100	ENSMUST00000053414.13	ENSMUSG00000052407.18	Ccdc171	chr4	protein_coding	coiled-coil domain containing 171
chr4	83476267	83476766	+	83476267	83498985	A3SS	0.5	50	50	ENSMUST00000053414.13	ENSMUSG00000052407.18	Ccdc171	chr4	protein_coding	coiled-coil domain containing 171
chr4	83573871	83575549	+	83573871	83575573	A3SS	0.5	50	50	ENSMUST00000053414.13	ENSMUSG00000052407.18	Ccdc171	chr4	protein_coding	coiled-coil domain containing 171
chr4	83713568	83716317	+	83713568	83736237	A3SS	0.5	50	50	ENSMUST00000053414.13	ENSMUSG00000052407.18	Ccdc171	chr4	protein_coding	coiled-coil domain containing 171
chr4	83614352	83614488	+	83612672	83614488	A5SS	0.5	50	50	ENSMUST00000053414.13	ENSMUSG00000052407.18	Ccdc171	chr4	protein_coding	coiled-coil domain containing 171
chr4	84332585	84464442	-	84332585;84424848	84424765;84464442	ES	0.33	50	50	ENSMUST00000102820.9	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84464642	84593212	-	84464642;84474141	84474016;84593212	ES	0.2	50	50	ENSMUST00000102820.9	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84194684;84196176	84196143;84209930	-	84194684	84209930	cassetteExon	0.5	100	100	ENSMUST00000102820.9	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84194684;84209562	84209497;84209930	-	84194684	84209930	cassetteExon	0.5	100	100	ENSMUST00000102820.9	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585;84449905	84449807;84464442	-	84332585;84424848	84424765;84464442	MXE	0.5	100	100	ENSMUST00000102820.9	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84474141;84528434	84528346;84593212	-	84474141	84593212	cassetteExon	0.5	100	100	ENSMUST00000102820.9	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84464642;84590857	84590637;84593212	-	84464642;84474141	84474016;84593212	MXE	0.5	100	100	ENSMUST00000102820.9	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84474141;84590857	84590637;84593212	-	84474141	84593212	cassetteExon	0.5	100	100	ENSMUST00000102820.9	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84194678	84209930	-	84194684	84209930	A3SS	0.25	50	50	ENSMUST00000102820.9	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84329827	84332483	-	84309361	84332483	A3SS	0.5	50	50	ENSMUST00000102820.9	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585	84425949	-	84332585	84424765	A5SS&ES	0.14	50	50	ENSMUST00000102820.9	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585	84441601	-	84332585	84424765	A5SS&ES	0.14	50	50	ENSMUST00000102820.9	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585	84451460	-	84332585	84424765	A5SS&ES	0.14	50	50	ENSMUST00000102820.9	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84464642	84464782	-	84464642	84474016	A5SS	0.25	50	50	ENSMUST00000102820.9	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84474141	84593171	-	84474141	84593212	A5SS	0.25	50	50	ENSMUST00000102820.9	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585	84474016	-	84332585;84464642	84464442;84474016	ES	0.5	50	50	ENSMUST00000107198.9	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585;84424848	84424765;84593212	-	84332585;84474141	84464442;84593212	MXE	0.5	100	100	ENSMUST00000107198.9	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585;84449905	84449807;84464442	-	84332585	84464442	cassetteExon	0.5	100	100	ENSMUST00000107198.9	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585	84425949	-	84332585	84464442	A5SS	0.14	50	50	ENSMUST00000107198.9	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585	84441601	-	84332585	84464442	A5SS	0.14	50	50	ENSMUST00000107198.9	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585	84451460	-	84332585	84464442	A5SS	0.14	50	50	ENSMUST00000107198.9	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84194678	84209930	-	84194678;84209562	84209501;84209930	ES	0.25	50	50	ENSMUST00000176612.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585;84424848	84424765;84593212	-	84332585;84464642	84464442;84593212	MXE	0.5	100	100	ENSMUST00000176612.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585;84474141	84474016;84593212	-	84332585;84464642	84464442;84593212	MXE	0.5	100	100	ENSMUST00000176612.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84464642;84590857	84590637;84593212	-	84464642	84593212	cassetteExon	0.5	100	100	ENSMUST00000176612.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84194684	84209930	-	84209562	84209930	A3SS&ES	0.25	50	50	ENSMUST00000176612.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84196176	84209501	-	84194678	84209501	A3SS	0.5	50	50	ENSMUST00000176612.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84196176	84209930	-	84209562	84209930	A3SS&ES	0.25	50	50	ENSMUST00000176612.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84528434	84593212	-	84464642	84593212	A3SS	0.2	50	50	ENSMUST00000176612.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84464642	84464782	-	84464642	84593212	A5SS	0.25	50	50	ENSMUST00000176612.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84196176	84209930	-	84194678	84209930	A3SS	0.25	50	50	ENSMUST00000176971.2	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585;84424848	84424765;84593212	-	84332585;84474141	84474016;84593212	MXE	0.5	100	100	ENSMUST00000176691.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585	84425949	-	84332585	84474016	A5SS	0.14	50	50	ENSMUST00000176691.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585	84441601	-	84332585	84474016	A5SS	0.14	50	50	ENSMUST00000176691.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585	84449807	-	84332585	84474016	A5SS	0.14	50	50	ENSMUST00000176691.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585	84451460	-	84332585	84474016	A5SS	0.14	50	50	ENSMUST00000176691.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84194684;84209562	84209497;84209930	-	84194684;84196176	84196143;84209930	MXE	0.5	100	100	ENSMUST00000177277.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84196176;84209562	84209497;84209930	-	84196176	84209930	cassetteExon	0.5	100	100	ENSMUST00000177277.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84196176;84209562	84209501;84209930	-	84196176	84209930	cassetteExon	0.5	100	100	ENSMUST00000177277.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84194684;84196176	84196143;84209497	-	84194684	84209497	cassetteExon	0.5	100	100	ENSMUST00000176702.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84194678	84209930	-	84209562	84209930	A3SS&ES	0.25	50	50	ENSMUST00000176702.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84194684	84209497	-	84194684	84196143	A5SS&ES	0.33	50	50	ENSMUST00000176998.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84196176	84209497	-	84196176	84209501	A5SS	0.33	50	50	ENSMUST00000176998.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585;84424848	84424765;84593212	-	84332585;84590857	84464442;84593212	MXE	0.5	100	100	ENSMUST00000175800.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585;84474141	84474016;84590637	-	84332585;84464642	84464442;84590637	MXE	0.5	100	100	ENSMUST00000175800.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84464642;84474141	84474016;84590637	-	84464642	84590637	cassetteExon	0.5	100	100	ENSMUST00000175800.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585;84474141	84474016;84593212	-	84332585;84590857	84464442;84593212	MXE	0.5	100	100	ENSMUST00000175800.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84528434	84593212	-	84590857	84593212	A3SS&ES	0.2	50	50	ENSMUST00000175800.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84464642	84464782	-	84464642	84590637	A5SS	0.25	50	50	ENSMUST00000175800.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585;84424848	84424765;84593212	-	84332585;84474141	84449807;84593212	MXE	0.5	100	100	ENSMUST00000176418.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585	84425949	-	84332585	84449807	A5SS	0.14	50	50	ENSMUST00000176418.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585	84441601	-	84332585	84449807	A5SS	0.14	50	50	ENSMUST00000176418.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585	84451460	-	84332585	84449807	A5SS&ES	0.14	50	50	ENSMUST00000176418.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585	84441601	-	84332585	84425949	5pMXE	0.14	50	50	ENSMUST00000175757.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585	84451460	-	84332585	84425949	5pMXE	0.14	50	50	ENSMUST00000175757.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84424848	84593212	-	84424848;84464642	84464442;84593212	ES	0.2	50	50	ENSMUST00000176947.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585;84474141	84474016;84593212	-	84332585;84464642	84424765;84593212	MXE	0.5	100	100	ENSMUST00000176947.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585;84424848	84424765;84593212	-	84332585;84528434	84474016;84593212	MXE	0.5	100	100	ENSMUST00000175969.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585;84464642	84464442;84593212	-	84332585;84528434	84474016;84593212	MXE	0.5	100	100	ENSMUST00000175969.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84474141;84590857	84590637;84593212	-	84474141;84528434	84528346;84593212	MXE	0.5	100	100	ENSMUST00000175969.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84474141	84593171	-	84474141	84528346	A5SS&ES	0.25	50	50	ENSMUST00000175969.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585	84441601	-	84332585	84451460	A5SS	0.14	50	50	ENSMUST00000176476.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585;84424848	84424765;84593212	-	84332585;84528434	84464442;84593212	MXE	0.5	100	100	ENSMUST00000123276.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84464642;84590857	84590637;84593212	-	84464642;84528434	84474016;84593212	MXE	0.5	100	100	ENSMUST00000123276.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84464642	84590637	-	84464642	84474016	A5SS&ES	0.25	50	50	ENSMUST00000176346.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84464642	84593212	-	84464642	84474016	A5SS&ES	0.25	50	50	ENSMUST00000176346.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84474141	84590637	-	84474141	84593171	A5SS	0.25	50	50	ENSMUST00000176346.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84528434	84593212	-	84424848	84593212	A3SS	0.2	50	50	ENSMUST00000175756.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84590857	84593212	-	84424848	84593212	A3SS	0.2	50	50	ENSMUST00000175756.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585	84449807	-	84332585	84424765	A5SS&ES	0.14	50	50	ENSMUST00000175756.8	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585	84474016	-	84332585	84464442	5pMXE	0.14	50	50	ENSMUST00000177040.2	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84332585	84474016	-	84464642	84474016	3pMXE	0.5	50	50	ENSMUST00000176370.2	ENSMUSG00000028487.19	Bnc2	chr4	protein_coding	basonuclin 2
chr4	84968373	84981418	+	84968373	84981415	A3SS	0.5	50	50	ENSMUST00000047023.13	ENSMUSG00000038070.16	Cntln	chr4	protein_coding	centlein, centrosomal protein
chr4	85304157	85305808	+	85304157	85305791	A3SS	0.5	50	50	ENSMUST00000107188.10	ENSMUSG00000028488.16	Sh3gl2	chr4	protein_coding	SH3-domain GRB2-like 2
chr4	85299745	85304027	+	85299745	85555038	A3SS	0.5	50	50	ENSMUST00000107189.8	ENSMUSG00000028488.16	Sh3gl2	chr4	protein_coding	SH3-domain GRB2-like 2
chr4	85683137	85699940	+	85683137	86005946	A3SS	0.5	50	50	ENSMUST00000213098.2	ENSMUSG00000066113.17	Adamtsl1	chr4	protein_coding	ADAMTS-like 1
chr4	85972357	86005946	+	85683137	86005946	A5SS	0.5	50	50	ENSMUST00000213098.2	ENSMUSG00000066113.17	Adamtsl1	chr4	protein_coding	ADAMTS-like 1
chr4	86150928;86162004	86161954;86166208	+	86150928	86166208	cassetteExon	0.5	100	100	ENSMUST00000107178.9	ENSMUSG00000066113.17	Adamtsl1	chr4	protein_coding	ADAMTS-like 1
chr4	86208085	86240271	+	86208085	86240196	A3SS	0.5	50	50	ENSMUST00000107178.9	ENSMUSG00000066113.17	Adamtsl1	chr4	protein_coding	ADAMTS-like 1
chr4	86194852	86195108	+	86171077	86195108	A5SS	0.5	50	50	ENSMUST00000107178.9	ENSMUSG00000066113.17	Adamtsl1	chr4	protein_coding	ADAMTS-like 1
chr4	86406156	86476212	-	86406156	86457202	5pMXE	0.5	50	50	ENSMUST00000151481.8	ENSMUSG00000028492.14	Saxo1	chr4	protein_coding	stabilizer of axonemal microtubules 1
chr4	86397315;86399910	86399838;86405977	-	86397315	86405977	cassetteExon	0.5	100	100	ENSMUST00000151481.8	ENSMUSG00000028492.14	Saxo1	chr4	protein_coding	stabilizer of axonemal microtubules 1
chr4	86397315	86405977	-	86399910	86405977	3pMXE	0.5	50	50	ENSMUST00000139694.2	ENSMUSG00000028492.14	Saxo1	chr4	protein_coding	stabilizer of axonemal microtubules 1
chr4	86521200	86523874	-	86521200;86522526	86522394;86523874	ES	0.5	50	50	ENSMUST00000070607.9	ENSMUSG00000038047.19	Haus6	chr4	protein_coding	HAUS augmin-like complex, subunit 6
chr4	86523952	86529923	-	86523952;86526227	86526132;86529923	ES	0.5	50	50	ENSMUST00000070607.9	ENSMUSG00000038047.19	Haus6	chr4	protein_coding	HAUS augmin-like complex, subunit 6
chr4	86575641;86576409	86576337;86576818	-	86575641	86576818	cassetteExon	0.5	100	100	ENSMUST00000154999.2	ENSMUSG00000028494.13	Plin2	chr4	protein_coding	perilipin 2
chr4	86582748	86583924	-	86582748	86586604	A5SS	0.5	50	50	ENSMUST00000000466.13	ENSMUSG00000028494.13	Plin2	chr4	protein_coding	perilipin 2
chr4	86586942	86587683	-	86586942	86588182	A5SS	0.33	50	50	ENSMUST00000000466.13	ENSMUSG00000028494.13	Plin2	chr4	protein_coding	perilipin 2
chr4	86586942	86587938	-	86586942	86588182	A5SS	0.33	50	50	ENSMUST00000000466.13	ENSMUSG00000028494.13	Plin2	chr4	protein_coding	perilipin 2
chr4	86586942	86587938	-	86586942	86587683	5pMXE	0.33	50	50	ENSMUST00000149700.8	ENSMUSG00000028494.13	Plin2	chr4	protein_coding	perilipin 2
chr4	86731774	86738099	+	86731774;86732165	86732019;86738099	ES	0.5	50	50	ENSMUST00000045512.15	ENSMUSG00000038024.18	Dennd4c	chr4	protein_coding	DENN/MADD domain containing 4C
chr4	86805402	86829853	+	86805402;86818856	86818719;86829853	ES	0.5	50	50	ENSMUST00000045224.14	ENSMUSG00000038007.15	Acer2	chr4	protein_coding	alkaline ceramidase 2
chr4	86829990	86850269	+	86829990	86835631	3pMXE	0.5	50	50	ENSMUST00000045224.14	ENSMUSG00000038007.15	Acer2	chr4	protein_coding	alkaline ceramidase 2
chr4	86849079	86850269	+	86829990	86850269	A5SS	0.5	50	50	ENSMUST00000128712.2	ENSMUSG00000038007.15	Acer2	chr4	protein_coding	alkaline ceramidase 2
chr4	86950528	86991425	-	86950528;86968171	86968121;86991425	ES	0.5	50	50	ENSMUST00000107157.9	ENSMUSG00000037996.18	Slc24a2	chr4	protein_coding	solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
chr4	86991533	87145120	-	86991533;86994394	86994356;87145120	ES	0.33	50	50	ENSMUST00000107157.9	ENSMUSG00000037996.18	Slc24a2	chr4	protein_coding	solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
chr4	86991533;87094584	87094399;87145120	-	86991533;86994394	86994356;87145120	MXE	0.5	100	100	ENSMUST00000107157.9	ENSMUSG00000037996.18	Slc24a2	chr4	protein_coding	solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
chr4	86994394;87094584	87094399;87145120	-	86994394	87145120	cassetteExon	0.5	100	100	ENSMUST00000107157.9	ENSMUSG00000037996.18	Slc24a2	chr4	protein_coding	solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
chr4	86929997	86946483	-	86930009	86946483	A3SS	0.5	50	50	ENSMUST00000107157.9	ENSMUSG00000037996.18	Slc24a2	chr4	protein_coding	solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
chr4	86991533	87094399	-	86991533;86994394	86994356;87094399	ES	0.5	50	50	ENSMUST00000107158.9	ENSMUSG00000037996.18	Slc24a2	chr4	protein_coding	solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
chr4	86994394	87145120	-	86994394	87094399	5pMXE	0.5	50	50	ENSMUST00000146815.2	ENSMUSG00000037996.18	Slc24a2	chr4	protein_coding	solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
chr4	86991533	87145120	-	86991533;87094584	87094399;87145120	ES	0.33	50	50	ENSMUST00000134248.8	ENSMUSG00000037996.18	Slc24a2	chr4	protein_coding	solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
chr4	86991533	87145120	-	87094584	87145120	3pMXE	0.33	50	50	ENSMUST00000155361.2	ENSMUSG00000037996.18	Slc24a2	chr4	protein_coding	solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
chr4	86994394	87145120	-	87094584	87145120	3pMXE	0.33	50	50	ENSMUST00000155361.2	ENSMUSG00000037996.18	Slc24a2	chr4	protein_coding	solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
chr4	87692383	87701886	-	87692383;87700595	87700524;87701886	ES	0.5	50	50	ENSMUST00000078090.12	ENSMUSG00000028496.18	Mllt3	chr4	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3
chr4	87798385;87929944	87929870;87949761	-	87798385	87949761	cassetteExon	0.5	100	100	ENSMUST00000078090.12	ENSMUSG00000028496.18	Mllt3	chr4	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3
chr4	87753230	87758919	-	87712248	87758919	A3SS	0.5	50	50	ENSMUST00000078090.12	ENSMUSG00000028496.18	Mllt3	chr4	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3
chr4	87701957	87724448	-	87701957	87707524	A5SS&ES	0.5	50	50	ENSMUST00000078090.12	ENSMUSG00000028496.18	Mllt3	chr4	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3
chr4	87712248	87724448	-	87712248	87758919	A5SS	0.5	50	50	ENSMUST00000078090.12	ENSMUSG00000028496.18	Mllt3	chr4	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3
chr4	87792218	87792686	-	87792218	87798303	A5SS	0.5	50	50	ENSMUST00000078090.12	ENSMUSG00000028496.18	Mllt3	chr4	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3
chr4	87949941	87950874	-	87949941	87951321	A5SS	0.5	50	50	ENSMUST00000078090.12	ENSMUSG00000028496.18	Mllt3	chr4	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3
chr4	87712248	87724448	-	87701957	87724448	A3SS	0.5	50	50	ENSMUST00000148059.2	ENSMUSG00000028496.18	Mllt3	chr4	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3
chr4	87798385	87949761	-	87759626	87949761	A3SS	0.33	50	50	ENSMUST00000128930.8	ENSMUSG00000028496.18	Mllt3	chr4	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3
chr4	87929944	87949761	-	87759626	87949761	A3SS	0.33	50	50	ENSMUST00000128930.8	ENSMUSG00000028496.18	Mllt3	chr4	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3
chr4	87759626	87792075	-	87759626	87949761	A5SS	0.5	50	50	ENSMUST00000128930.8	ENSMUSG00000028496.18	Mllt3	chr4	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3
chr4	88104319	88147560	+	88104319;88115253	88114996;88147560	ES	0.5	50	50	ENSMUST00000097992.10	ENSMUSG00000038368.17	Focad	chr4	protein_coding	focadhesin
chr4	88267130	88273462	+	88267130	88273605	A3SS	0.5	50	50	ENSMUST00000097992.10	ENSMUSG00000038368.17	Focad	chr4	protein_coding	focadhesin
chr4	88215085	88215221	+	88197540	88215221	A5SS	0.5	50	50	ENSMUST00000097992.10	ENSMUSG00000038368.17	Focad	chr4	protein_coding	focadhesin
chr4	88318802	88319254	+	88316168	88319254	A5SS	0.33	50	50	ENSMUST00000097992.10	ENSMUSG00000038368.17	Focad	chr4	protein_coding	focadhesin
chr4	88318979	88319254	+	88316168	88319254	A5SS	0.33	50	50	ENSMUST00000097992.10	ENSMUSG00000038368.17	Focad	chr4	protein_coding	focadhesin
chr4	88318979	88319254	+	88318802	88319254	A5SS	0.33	50	50	ENSMUST00000162039.2	ENSMUSG00000038368.17	Focad	chr4	protein_coding	focadhesin
chr4	88332583	88337936	-	88316456	88337936	A3SS	0.5	50	50	ENSMUST00000132493.8	ENSMUSG00000028497.13	Hacd4	chr4	protein_coding	3-hydroxyacyl-CoA dehydratase 4
chr4	88547592	88552353	-	88547592;88548376	88548066;88552353	ES	0.33	50	50	ENSMUST00000107143.8	ENSMUSG00000038330.11	Pramel32	chr4	protein_coding	PRAME like 32
chr4	88547709	88548066	-	88547592	88548066	A3SS	0.5	50	50	ENSMUST00000107143.8	ENSMUSG00000038330.11	Pramel32	chr4	protein_coding	PRAME like 32
chr4	88547709	88552353	-	88548376	88552353	A3SS&ES	0.33	50	50	ENSMUST00000107143.8	ENSMUSG00000038330.11	Pramel32	chr4	protein_coding	PRAME like 32
chr4	88546426	88547017	-	88546426	88547439	A5SS	0.5	50	50	ENSMUST00000107143.8	ENSMUSG00000038330.11	Pramel32	chr4	protein_coding	PRAME like 32
chr4	88547709	88552353	-	88547592	88552353	A3SS	0.33	50	50	ENSMUST00000134155.2	ENSMUSG00000038330.11	Pramel32	chr4	protein_coding	PRAME like 32
chr4	88547709;88548376	88548066;88552353	-	88547709	88552353	cassetteExon	0.5	100	100	ENSMUST00000156062.2	ENSMUSG00000038330.11	Pramel32	chr4	protein_coding	PRAME like 32
chr4	88547592	88552353	-	88548376	88552353	A3SS&ES	0.33	50	50	ENSMUST00000107142.3	ENSMUSG00000038330.11	Pramel32	chr4	protein_coding	PRAME like 32
chr4	88657294	88661101	-	88642093	88661101	A3SS	0.5	50	50	ENSMUST00000233397.2	ENSMUSG00000086074.3	Gm13274	chr4	lncRNA	predicted gene 13274
chr4	88657294	88662486	-	88661199	88662486	A3SS&ES	0.5	50	50	ENSMUST00000233397.2	ENSMUSG00000086074.3	Gm13274	chr4	lncRNA	predicted gene 13274
chr4	88642093	88651797	-	88642093	88661101	A5SS	0.5	50	50	ENSMUST00000233397.2	ENSMUSG00000086074.3	Gm13274	chr4	lncRNA	predicted gene 13274
chr4	88657294;88661199	88661101;88662486	-	88657294	88662486	cassetteExon	0.5	100	100	ENSMUST00000123455.2	ENSMUSG00000086074.3	Gm13274	chr4	lncRNA	predicted gene 13274
chr4	88977072	89002474	+	88975572	89002474	A5SS	0.5	50	50	ENSMUST00000146678.2	ENSMUSG00000085183.2	Wincr1	chr4	lncRNA	WNT induced non-coding RNA 1
chr4	89042571	89046400	-	89036912	89046400	A3SS	0.5	50	50	ENSMUST00000154352.2	ENSMUSG00000085569.2	Gm12602	chr4	lncRNA	predicted gene 12602
chr4	89154610	89172067	-	89154610;89157213	89157112;89172067	ES	0.5	50	50	ENSMUST00000129527.8	ENSMUSG00000087659.8	Gm12606	chr4	lncRNA	predicted gene 12606
chr4	89172317	89191494	-	89172317	89190669	5pMXE	0.5	50	50	ENSMUST00000129527.8	ENSMUSG00000087659.8	Gm12606	chr4	lncRNA	predicted gene 12606
chr4	89195222	89212571	-	89195222	89200223	5pMXE	0.5	50	50	ENSMUST00000060501.5	ENSMUSG00000044303.7	Cdkn2a	chr4	protein_coding	cyclin dependent kinase inhibitor 2A
chr4	89577176	89579673	+	89567787	89579673	A5SS	0.5	50	50	ENSMUST00000131576.2	ENSMUSG00000043753.3	Dmrta1	chr4	protein_coding	doublesex and mab-3 related transcription factor like family A1
chr4	91197091	91264173	-	91197091	91260137	5pMXE	0.16	50	50	ENSMUST00000107110.8	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91197091	91287675	-	91197091	91260137	5pMXE	0.16	50	50	ENSMUST00000107110.8	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91141807;91142416	91142378;91148998	-	91141807	91148998	cassetteExon	0.5	100	100	ENSMUST00000107110.8	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91197091;91199900	91199810;91260137	-	91197091	91260137	cassetteExon	0.5	100	100	ENSMUST00000107110.8	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91141804	91148998	-	91141807	91148998	A3SS	0.33	50	50	ENSMUST00000107110.8	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91197091	91244887	-	91197091	91260137	A5SS	0.16	50	50	ENSMUST00000107110.8	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91197091	91259767	-	91197091	91260137	A5SS	0.16	50	50	ENSMUST00000107110.8	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91141804	91142378	-	91141807	91142378	A3SS	0.5	50	50	ENSMUST00000008633.15	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91141804	91148998	-	91142416	91148998	A3SS&ES	0.33	50	50	ENSMUST00000008633.15	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91199900	91261129	-	91199900	91260137	5pMXE	0.25	50	50	ENSMUST00000107118.8	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91199900	91264173	-	91199900	91260137	5pMXE	0.25	50	50	ENSMUST00000107118.8	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91197091	91244887	-	91197091	91199810	A5SS&ES	0.25	50	50	ENSMUST00000107118.8	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91197091	91259767	-	91197091	91199810	A5SS&ES	0.25	50	50	ENSMUST00000107118.8	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91199900	91201548	-	91199900	91260137	A5SS	0.25	50	50	ENSMUST00000107118.8	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91141804	91148998	-	91141804;91142416	91142378;91148998	ES	0.33	50	50	ENSMUST00000107120.8	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91197091	91264173	-	91197091;91199900	91199810;91264173	ES	0.33	50	50	ENSMUST00000107120.8	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91141807	91148998	-	91142416	91148998	A3SS&ES	0.33	50	50	ENSMUST00000107120.8	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91197088	91264173	-	91199900	91264173	A3SS&ES	0.33	50	50	ENSMUST00000107120.8	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91197091	91260137	-	91197091	91199810	A5SS&ES	0.2	50	50	ENSMUST00000107120.8	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91199900	91201548	-	91199900	91264173	A5SS	0.25	50	50	ENSMUST00000107120.8	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91199900	91261129	-	91199900	91264173	A5SS	0.25	50	50	ENSMUST00000107120.8	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91268858	91287675	-	91197091	91287675	A3SS	0.5	50	50	ENSMUST00000102799.10	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91197091	91199810	-	91197091	91287675	A5SS	0.16	50	50	ENSMUST00000102799.10	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91197091	91244887	-	91197091	91287675	A5SS	0.16	50	50	ENSMUST00000102799.10	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91197091	91259767	-	91197091	91287675	A5SS	0.16	50	50	ENSMUST00000102799.10	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91197091	91264173	-	91197091	91287675	A5SS	0.16	50	50	ENSMUST00000102799.10	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91197088	91264173	-	91197091	91264173	A3SS	0.33	50	50	ENSMUST00000107124.10	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91197091	91244887	-	91197091	91264173	A5SS	0.16	50	50	ENSMUST00000107124.10	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91197091	91259767	-	91197091	91264173	A5SS	0.16	50	50	ENSMUST00000107124.10	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91141804	91148998	-	91141804	91142378	5pMXE	0.5	50	50	ENSMUST00000128599.2	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91199900	91261129	-	91199900	91201548	5pMXE	0.25	50	50	ENSMUST00000107116.9	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	91197091	91259767	-	91197091	91244887	5pMXE	0.16	50	50	ENSMUST00000177109.2	ENSMUSG00000008489.19	Elavl2	chr4	protein_coding	ELAV like RNA binding protein 1
chr4	92034843	92035450	-	92034843	92034984	A5SS	0.5	50	50	ENSMUST00000107108.8	ENSMUSG00000028533.11	Izumo3	chr4	protein_coding	IZUMO family member 3
chr4	94350291	94352667	-	94349592	94352667	A3SS	0.5	50	50	ENSMUST00000133884.8	ENSMUSG00000087128.8	Gm12655	chr4	lncRNA	predicted gene 12655
chr4	94463471	94470718	-	94463471;94466692	94466624;94470718	ES	0.5	50	50	ENSMUST00000107107.9	ENSMUSG00000028577.14	Plaa	chr4	protein_coding	phospholipase A2, activating protein
chr4	94550903	94566502	+	94550903	94552453	3pMXE	0.5	50	50	ENSMUST00000107104.3	ENSMUSG00000028576.13	Ift74	chr4	protein_coding	intraflagellar transport 74
chr4	94531619	94538277	-	94531619;94536625	94536558;94538277	ES	0.5	50	50	ENSMUST00000107101.2	ENSMUSG00000049799.14	Lrrc19	chr4	protein_coding	leucine rich repeat containing 19
chr4	94686958;94687516	94687364;94692522	+	94686958	94692522	cassetteExon	0.5	100	100	ENSMUST00000073939.13	ENSMUSG00000006386.16	Tek	chr4	protein_coding	TEK receptor tyrosine kinase
chr4	94699663	94708321	+	94699653	94708321	A5SS	0.5	50	50	ENSMUST00000073939.13	ENSMUSG00000006386.16	Tek	chr4	protein_coding	TEK receptor tyrosine kinase
chr4	94740111	94741606	+	94740114	94741606	A5SS	0.5	50	50	ENSMUST00000073939.13	ENSMUSG00000006386.16	Tek	chr4	protein_coding	TEK receptor tyrosine kinase
chr4	94836396	94839163	-	94836396;94836671	94836566;94839163	ES	0.5	50	50	ENSMUST00000075872.4	ENSMUSG00000062627.10	Mysm1	chr4	protein_coding	myb-like, SWIRM and MPN domains 1
chr4	94857295	94858861	-	94857295;94858772	94858749;94858861	ES	0.33	50	50	ENSMUST00000075872.4	ENSMUSG00000062627.10	Mysm1	chr4	protein_coding	myb-like, SWIRM and MPN domains 1
chr4	94857290	94858749	-	94857295	94858749	A3SS	0.5	50	50	ENSMUST00000075872.4	ENSMUSG00000062627.10	Mysm1	chr4	protein_coding	myb-like, SWIRM and MPN domains 1
chr4	94841174	94841571	-	94841174	94841735	A5SS	0.5	50	50	ENSMUST00000075872.4	ENSMUSG00000062627.10	Mysm1	chr4	protein_coding	myb-like, SWIRM and MPN domains 1
chr4	94857295	94858861	-	94858772	94858861	A3SS&ES	0.33	50	50	ENSMUST00000134730.8	ENSMUSG00000062627.10	Mysm1	chr4	protein_coding	myb-like, SWIRM and MPN domains 1
chr4	94856205	94858861	-	94856205;94857295	94857217;94858861	ES	0.33	50	50	ENSMUST00000155935.8	ENSMUSG00000062627.10	Mysm1	chr4	protein_coding	myb-like, SWIRM and MPN domains 1
chr4	94858772	94858861	-	94856205	94858861	A3SS	0.33	50	50	ENSMUST00000132758.8	ENSMUSG00000062627.10	Mysm1	chr4	protein_coding	myb-like, SWIRM and MPN domains 1
chr4	94953981	95034556	+	94953981	94955411	3pMXE	0.5	50	50	ENSMUST00000142292.8	ENSMUSG00000087366.8	Junos	chr4	lncRNA	jun proto-oncogene, opposite strand
chr4	94941633	94953850	+	94950940	94953850	A5SS&ES	0.5	50	50	ENSMUST00000142292.8	ENSMUSG00000087366.8	Junos	chr4	lncRNA	jun proto-oncogene, opposite strand
chr4	94941633	94953850	+	94941633	94948782	3pMXE	0.5	50	50	ENSMUST00000125917.2	ENSMUSG00000087366.8	Junos	chr4	lncRNA	jun proto-oncogene, opposite strand
chr4	95035437	95049428	+	95035437	95047272	3pMXE	0.2	50	50	ENSMUST00000124166.8	ENSMUSG00000087366.8	Junos	chr4	lncRNA	jun proto-oncogene, opposite strand
chr4	95035437	95054007	+	95035437	95047272	3pMXE	0.2	50	50	ENSMUST00000124166.8	ENSMUSG00000087366.8	Junos	chr4	lncRNA	jun proto-oncogene, opposite strand
chr4	95035437	95035583	+	95035437	95047272	A3SS	0.2	50	50	ENSMUST00000124166.8	ENSMUSG00000087366.8	Junos	chr4	lncRNA	jun proto-oncogene, opposite strand
chr4	95035437	95038357	+	95035437	95047272	A3SS	0.2	50	50	ENSMUST00000124166.8	ENSMUSG00000087366.8	Junos	chr4	lncRNA	jun proto-oncogene, opposite strand
chr4	94964107	95035342	+	95034726	95035342	A5SS&ES	0.2	50	50	ENSMUST00000124166.8	ENSMUSG00000087366.8	Junos	chr4	lncRNA	jun proto-oncogene, opposite strand
chr4	94989544	95035342	+	95034726	95035342	A5SS&ES	0.2	50	50	ENSMUST00000124166.8	ENSMUSG00000087366.8	Junos	chr4	lncRNA	jun proto-oncogene, opposite strand
chr4	95012295	95035342	+	95034726	95035342	A5SS&ES	0.2	50	50	ENSMUST00000124166.8	ENSMUSG00000087366.8	Junos	chr4	lncRNA	jun proto-oncogene, opposite strand
chr4	95025731	95035342	+	95034726	95035342	A5SS&ES	0.2	50	50	ENSMUST00000124166.8	ENSMUSG00000087366.8	Junos	chr4	lncRNA	jun proto-oncogene, opposite strand
chr4	94964107	94981831	+	94964107	95035342	A3SS	0.5	50	50	ENSMUST00000143242.8	ENSMUSG00000087366.8	Junos	chr4	lncRNA	jun proto-oncogene, opposite strand
chr4	95035437	95035583	+	95035437	95038357	A3SS	0.5	50	50	ENSMUST00000143242.8	ENSMUSG00000087366.8	Junos	chr4	lncRNA	jun proto-oncogene, opposite strand
chr4	94989544	95035342	+	94964107	95035342	A5SS	0.2	50	50	ENSMUST00000143242.8	ENSMUSG00000087366.8	Junos	chr4	lncRNA	jun proto-oncogene, opposite strand
chr4	95012295	95035342	+	94964107	95035342	A5SS	0.2	50	50	ENSMUST00000143242.8	ENSMUSG00000087366.8	Junos	chr4	lncRNA	jun proto-oncogene, opposite strand
chr4	95025731	95035342	+	94964107	95035342	A5SS	0.2	50	50	ENSMUST00000143242.8	ENSMUSG00000087366.8	Junos	chr4	lncRNA	jun proto-oncogene, opposite strand
chr4	94981970;94989544	94989295;95025652	+	94981970;95021935	95021867;95025652	MXE	0.5	100	100	ENSMUST00000133772.2	ENSMUSG00000087366.8	Junos	chr4	lncRNA	jun proto-oncogene, opposite strand
chr4	95035437	95054007	+	95035437	95049428	3pMXE	0.2	50	50	ENSMUST00000130684.8	ENSMUSG00000087366.8	Junos	chr4	lncRNA	jun proto-oncogene, opposite strand
chr4	94989544;95025731	95025652;95035342	+	94989544	95035342	cassetteExon	0.5	100	100	ENSMUST00000130684.8	ENSMUSG00000087366.8	Junos	chr4	lncRNA	jun proto-oncogene, opposite strand
chr4	95035437;95035663	95035583;95049428	+	95035437	95049428	cassetteExon	0.5	100	100	ENSMUST00000130684.8	ENSMUSG00000087366.8	Junos	chr4	lncRNA	jun proto-oncogene, opposite strand
chr4	94981970	95021867	+	94981970	94989295	A3SS&ES	0.5	50	50	ENSMUST00000130684.8	ENSMUSG00000087366.8	Junos	chr4	lncRNA	jun proto-oncogene, opposite strand
chr4	95035437	95038357	+	95035437	95049428	A3SS	0.2	50	50	ENSMUST00000130684.8	ENSMUSG00000087366.8	Junos	chr4	lncRNA	jun proto-oncogene, opposite strand
chr4	95012295	95035342	+	94989544	95035342	A5SS	0.25	50	50	ENSMUST00000130684.8	ENSMUSG00000087366.8	Junos	chr4	lncRNA	jun proto-oncogene, opposite strand
chr4	95035437;95049692	95049428;95054007	+	95035437	95054007	cassetteExon	0.5	100	100	ENSMUST00000125438.8	ENSMUSG00000087366.8	Junos	chr4	lncRNA	jun proto-oncogene, opposite strand
chr4	95035437	95035583	+	95035437	95054007	A3SS	0.2	50	50	ENSMUST00000125438.8	ENSMUSG00000087366.8	Junos	chr4	lncRNA	jun proto-oncogene, opposite strand
chr4	95035437	95038357	+	95035437	95054007	A3SS	0.2	50	50	ENSMUST00000125438.8	ENSMUSG00000087366.8	Junos	chr4	lncRNA	jun proto-oncogene, opposite strand
chr4	95012295	95035342	+	95025731	95035342	A5SS&ES	0.25	50	50	ENSMUST00000125438.8	ENSMUSG00000087366.8	Junos	chr4	lncRNA	jun proto-oncogene, opposite strand
chr4	95021935	95025652	+	94989544	95025652	A5SS	0.5	50	50	ENSMUST00000125438.8	ENSMUSG00000087366.8	Junos	chr4	lncRNA	jun proto-oncogene, opposite strand
chr4	95081641	95081938	+	95081641	95094427	A3SS	0.5	50	50	ENSMUST00000136941.2	ENSMUSG00000084918.2	Gm12708	chr4	lncRNA	predicted gene 12708
chr4	95085804	95094427	+	95081641	95094427	A5SS	0.5	50	50	ENSMUST00000136941.2	ENSMUSG00000084918.2	Gm12708	chr4	lncRNA	predicted gene 12708
chr4	95445828	95485860	+	95445828;95473684	95473469;95485860	ES	0.33	50	50	ENSMUST00000079223.11	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95473684	95489202	+	95473684;95485971	95485860;95489202	ES	0.33	50	50	ENSMUST00000079223.11	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95489353	95585197	+	95489353;95511806	95511718;95585197	ES	0.33	50	50	ENSMUST00000079223.11	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95627154	95688794	+	95627154;95657766	95657663;95688794	ES	0.5	50	50	ENSMUST00000079223.11	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95725896	95737819	+	95725896;95732430	95732310;95737819	ES	0.5	50	50	ENSMUST00000079223.11	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95732430	95811162	+	95732430;95737913	95737819;95811162	ES	0.33	50	50	ENSMUST00000079223.11	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95485971;95488234	95488218;95489202	+	95485971	95489202	cassetteExon	0.5	100	100	ENSMUST00000079223.11	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95585312;95620765	95620498;95627026	+	95585312	95627026	cassetteExon	0.5	100	100	ENSMUST00000079223.11	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95737913;95790293	95790216;95811162	+	95737913	95811162	cassetteExon	0.5	100	100	ENSMUST00000079223.11	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95445828	95446113	+	95445828	95473469	A3SS	0.33	50	50	ENSMUST00000079223.11	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95700406	95709119	+	95700406	95710215	A3SS	0.5	50	50	ENSMUST00000079223.11	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95725896	95727247	+	95725896	95732310	A3SS	0.33	50	50	ENSMUST00000079223.11	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95737913	95765199	+	95737913	95811162	A3SS	0.33	50	50	ENSMUST00000079223.11	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95467791	95473469	+	95445828	95473469	A5SS	0.5	50	50	ENSMUST00000079223.11	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95475405	95485860	+	95473684	95485860	A5SS	0.33	50	50	ENSMUST00000079223.11	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95525205	95585197	+	95511806	95585197	A5SS	0.33	50	50	ENSMUST00000079223.11	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95626718	95627026	+	95585312	95627026	A5SS	0.33	50	50	ENSMUST00000079223.11	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95725896	95737819	+	95725896	95727247	3pMXE	0.33	50	50	ENSMUST00000176162.8	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95445828;95473684	95473469;95489202	+	95445828;95485971	95485860;95489202	MXE	0.5	100	100	ENSMUST00000141248.8	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95627154;95657766	95657663;95725822	+	95627154;95710362	95688794;95725822	MXE	0.5	100	100	ENSMUST00000141248.8	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95445828	95446113	+	95445828	95485860	A3SS	0.33	50	50	ENSMUST00000141248.8	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95475405	95485860	+	95445828	95485860	A5SS	0.33	50	50	ENSMUST00000141248.8	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95525205	95585197	+	95489353	95585197	A5SS	0.33	50	50	ENSMUST00000141248.8	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95473684	95489202	+	95473684	95485860	3pMXE	0.33	50	50	ENSMUST00000177394.8	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95473684	95511718	+	95473684	95485860	3pMXE	0.33	50	50	ENSMUST00000177394.8	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95467791	95473473	+	95446270	95473473	A5SS	0.5	50	50	ENSMUST00000177394.8	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95467791	95473473	+	95467791	95473469	A3SS	0.5	50	50	ENSMUST00000043335.11	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95627154	95688794	+	95627154	95657663	3pMXE	0.5	50	50	ENSMUST00000134012.9	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95489353	95585197	+	95511806	95585197	A5SS&ES	0.33	50	50	ENSMUST00000134012.9	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95473684	95511718	+	95473684;95489353	95489202;95511718	ES	0.5	50	50	ENSMUST00000131654.9	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95488234	95489202	+	95473684	95489202	A5SS	0.33	50	50	ENSMUST00000131654.9	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95473684;95489353	95489202;95585197	+	95473684;95511806	95511718;95585197	MXE	0.5	100	100	ENSMUST00000107091.11	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95737913	95790216	+	95737913	95765199	3pMXE	0.33	50	50	ENSMUST00000147766.8	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95657766	95688794	+	95657766	95725822	A3SS	0.5	50	50	ENSMUST00000147766.8	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95710362	95725822	+	95657766	95725822	A5SS	0.5	50	50	ENSMUST00000147766.8	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95626718	95627026	+	95620765	95627026	A5SS	0.33	50	50	ENSMUST00000143742.3	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95627154	95688794	+	95657766	95688794	5pMXE	0.5	50	50	ENSMUST00000130541.8	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95725896;95732430	95732310;95811162	+	95725896;95737913	95737819;95811162	MXE	0.5	100	100	ENSMUST00000130541.8	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95790293	95811162	+	95732430	95811162	A5SS	0.33	50	50	ENSMUST00000156223.2	ENSMUSG00000028573.19	Fggy	chr4	protein_coding	FGGY carbohydrate kinase domain containing
chr4	95848894	95855023	-	95848894	95855361	A5SS	0.5	50	50	ENSMUST00000137239.2	ENSMUSG00000044125.7	9530080O11Rik	chr4	lncRNA	RIKEN cDNA 9530080O11 gene
chr4	95903138;95903945	95903902;95904646	+	95903138	95904646	cassetteExon	0.5	100	100	ENSMUST00000030306.14	ENSMUSG00000028572.14	Hook1	chr4	protein_coding	hook microtubule tethering protein 1
chr4	95908645	95909805	+	95907941	95909805	A5SS	0.5	50	50	ENSMUST00000030306.14	ENSMUSG00000028572.14	Hook1	chr4	protein_coding	hook microtubule tethering protein 1
chr4	95903138	95903902	+	95903138	95905825	A3SS	0.33	50	50	ENSMUST00000141448.8	ENSMUSG00000028572.14	Hook1	chr4	protein_coding	hook microtubule tethering protein 1
chr4	95903138	95904646	+	95903138	95905825	A3SS	0.33	50	50	ENSMUST00000141448.8	ENSMUSG00000028572.14	Hook1	chr4	protein_coding	hook microtubule tethering protein 1
chr4	95905262	95905825	+	95903138	95905825	A5SS	0.5	50	50	ENSMUST00000141448.8	ENSMUSG00000028572.14	Hook1	chr4	protein_coding	hook microtubule tethering protein 1
chr4	95947362	95956421	-	95947362	95950136	5pMXE	0.5	50	50	ENSMUST00000132513.8	ENSMUSG00000028571.16	Cyp2j13	chr4	protein_coding	cytochrome P450, family 2, subfamily j, polypeptide 13
chr4	95933865	95945010	-	95916080	95945010	A3SS	0.33	50	50	ENSMUST00000132513.8	ENSMUSG00000028571.16	Cyp2j13	chr4	protein_coding	cytochrome P450, family 2, subfamily j, polypeptide 13
chr4	95944933	95945010	-	95916080	95945010	A3SS	0.33	50	50	ENSMUST00000132513.8	ENSMUSG00000028571.16	Cyp2j13	chr4	protein_coding	cytochrome P450, family 2, subfamily j, polypeptide 13
chr4	95933865	95945010	-	95933865;95944933	95944795;95945010	ES	0.5	50	50	ENSMUST00000030305.13	ENSMUSG00000028571.16	Cyp2j13	chr4	protein_coding	cytochrome P450, family 2, subfamily j, polypeptide 13
chr4	95947362	95956421	-	95947362;95950312	95950136;95956421	ES	0.5	50	50	ENSMUST00000030305.13	ENSMUSG00000028571.16	Cyp2j13	chr4	protein_coding	cytochrome P450, family 2, subfamily j, polypeptide 13
chr4	96010900;96021394	96021232;96029070	-	96010900	96029070	cassetteExon	0.5	100	100	ENSMUST00000121694.3	ENSMUSG00000081225.4	Cyp2j12	chr4	protein_coding	cytochrome P450, family 2, subfamily j, polypeptide 12
chr4	97463158	97472785	-	97463158;97465890	97465748;97472785	ES	0.25	50	50	ENSMUST00000148653.8	ENSMUSG00000048747.15	E130114P18Rik	chr4	protein_coding	RIKEN cDNA E130114P18 gene
chr4	97465890;97468878	97468718;97472785	-	97465890	97472785	cassetteExon	0.5	100	100	ENSMUST00000148653.8	ENSMUSG00000048747.15	E130114P18Rik	chr4	protein_coding	RIKEN cDNA E130114P18 gene
chr4	97464257	97465748	-	97463158	97465748	A3SS	0.5	50	50	ENSMUST00000148653.8	ENSMUSG00000048747.15	E130114P18Rik	chr4	protein_coding	RIKEN cDNA E130114P18 gene
chr4	97457201	97457397	-	97457201	97457419	A5SS	0.5	50	50	ENSMUST00000148653.8	ENSMUSG00000048747.15	E130114P18Rik	chr4	protein_coding	RIKEN cDNA E130114P18 gene
chr4	97457515	97463038	-	97457515	97463056	A5SS	0.33	50	50	ENSMUST00000148653.8	ENSMUSG00000048747.15	E130114P18Rik	chr4	protein_coding	RIKEN cDNA E130114P18 gene
chr4	97457515	97472785	-	97457515;97463158	97463056;97472785	ES	0.25	50	50	ENSMUST00000107067.8	ENSMUSG00000048747.15	E130114P18Rik	chr4	protein_coding	RIKEN cDNA E130114P18 gene
chr4	97463158	97578860	-	97463158	97472785	5pMXE	0.33	50	50	ENSMUST00000107067.8	ENSMUSG00000048747.15	E130114P18Rik	chr4	protein_coding	RIKEN cDNA E130114P18 gene
chr4	97468878	97472785	-	97463158	97472785	A3SS	0.25	50	50	ENSMUST00000107067.8	ENSMUSG00000048747.15	E130114P18Rik	chr4	protein_coding	RIKEN cDNA E130114P18 gene
chr4	97457515;97463158	97463038;97472785	-	97457515	97472785	cassetteExon	0.5	100	100	ENSMUST00000126721.8	ENSMUSG00000048747.15	E130114P18Rik	chr4	protein_coding	RIKEN cDNA E130114P18 gene
chr4	97465890	97472785	-	97457515	97472785	A3SS	0.25	50	50	ENSMUST00000126721.8	ENSMUSG00000048747.15	E130114P18Rik	chr4	protein_coding	RIKEN cDNA E130114P18 gene
chr4	97468878	97472785	-	97457515	97472785	A3SS	0.25	50	50	ENSMUST00000126721.8	ENSMUSG00000048747.15	E130114P18Rik	chr4	protein_coding	RIKEN cDNA E130114P18 gene
chr4	97578973	97666228	-	97578973;97608546	97608448;97666228	ES	0.5	50	50	ENSMUST00000146447.8	ENSMUSG00000048747.15	E130114P18Rik	chr4	protein_coding	RIKEN cDNA E130114P18 gene
chr4	97567647	97578860	-	97463158	97578860	A3SS	0.5	50	50	ENSMUST00000146447.8	ENSMUSG00000048747.15	E130114P18Rik	chr4	protein_coding	RIKEN cDNA E130114P18 gene
chr4	97457515	97472785	-	97457515	97463056	A5SS&ES	0.33	50	50	ENSMUST00000146447.8	ENSMUSG00000048747.15	E130114P18Rik	chr4	protein_coding	RIKEN cDNA E130114P18 gene
chr4	97463158	97465748	-	97463158	97578860	A5SS	0.33	50	50	ENSMUST00000146447.8	ENSMUSG00000048747.15	E130114P18Rik	chr4	protein_coding	RIKEN cDNA E130114P18 gene
chr4	97671850	97888629	+	97671850;97844676	97844611;97888629	ES	0.5	50	50	ENSMUST00000152023.8	ENSMUSG00000028565.19	Nfia	chr4	protein_coding	nuclear factor I/A
chr4	97666231	97671319	+	97661148	97671319	A5SS	0.5	50	50	ENSMUST00000152023.8	ENSMUSG00000028565.19	Nfia	chr4	protein_coding	nuclear factor I/A
chr4	97768406	97844611	+	97671850	97844611	A5SS	0.33	50	50	ENSMUST00000152023.8	ENSMUSG00000028565.19	Nfia	chr4	protein_coding	nuclear factor I/A
chr4	97799486	97844611	+	97671850	97844611	A5SS	0.33	50	50	ENSMUST00000152023.8	ENSMUSG00000028565.19	Nfia	chr4	protein_coding	nuclear factor I/A
chr4	97909191	97951250	+	97909191;97929916	97929788;97951250	ES	0.5	50	50	ENSMUST00000075448.13	ENSMUSG00000028565.19	Nfia	chr4	protein_coding	nuclear factor I/A
chr4	97953683	97999455	+	97953683;97970053	97969962;97999455	ES	0.5	50	50	ENSMUST00000075448.13	ENSMUSG00000028565.19	Nfia	chr4	protein_coding	nuclear factor I/A
chr4	97671850;97929916	97929788;97951250	+	97671850;97909191	97844611;97951250	MXE	0.5	100	100	ENSMUST00000092532.13	ENSMUSG00000028565.19	Nfia	chr4	protein_coding	nuclear factor I/A
chr4	97671850	97844611	+	97671850	97929788	A3SS	0.33	50	50	ENSMUST00000107057.8	ENSMUSG00000028565.19	Nfia	chr4	protein_coding	nuclear factor I/A
chr4	97671850	97888629	+	97671850	97929788	A3SS	0.33	50	50	ENSMUST00000107057.8	ENSMUSG00000028565.19	Nfia	chr4	protein_coding	nuclear factor I/A
chr4	97909191	97929788	+	97671850	97929788	A5SS	0.5	50	50	ENSMUST00000107057.8	ENSMUSG00000028565.19	Nfia	chr4	protein_coding	nuclear factor I/A
chr4	97909191	97951250	+	97929916	97951250	A5SS&ES	0.5	50	50	ENSMUST00000107057.8	ENSMUSG00000028565.19	Nfia	chr4	protein_coding	nuclear factor I/A
chr4	97799486	97844611	+	97768406	97844611	A5SS	0.33	50	50	ENSMUST00000148930.3	ENSMUSG00000028565.19	Nfia	chr4	protein_coding	nuclear factor I/A
chr4	97909191	97951250	+	97909191	97929788	3pMXE	0.5	50	50	ENSMUST00000133011.2	ENSMUSG00000028565.19	Nfia	chr4	protein_coding	nuclear factor I/A
chr4	98210729	98219560	+	98210723	98219560	A5SS	0.5	50	50	ENSMUST00000131516.8	ENSMUSG00000046683.17	0610025J13Rik	chr4	lncRNA	RIKEN cDNA 0610025J13 gene
chr4	98253873	98268855	-	98253873	98263157	5pMXE	0.33	50	50	ENSMUST00000125034.2	ENSMUSG00000028563.17	Tm2d1	chr4	protein_coding	TM2 domain containing 1
chr4	98253873;98258820	98258729;98263157	-	98253873	98263157	cassetteExon	0.5	100	100	ENSMUST00000125034.2	ENSMUSG00000028563.17	Tm2d1	chr4	protein_coding	TM2 domain containing 1
chr4	98253873	98268855	-	98253873	98258729	A5SS&ES	0.33	50	50	ENSMUST00000107051.10	ENSMUSG00000028563.17	Tm2d1	chr4	protein_coding	TM2 domain containing 1
chr4	98263265	98268855	-	98263265	98271201	A5SS	0.5	50	50	ENSMUST00000107051.10	ENSMUSG00000028563.17	Tm2d1	chr4	protein_coding	TM2 domain containing 1
chr4	98263265	98268855	-	98263250	98268855	A3SS	0.33	50	50	ENSMUST00000030292.12	ENSMUSG00000028563.17	Tm2d1	chr4	protein_coding	TM2 domain containing 1
chr4	98253873;98263250	98263157;98268855	-	98253873	98268855	cassetteExon	0.5	100	100	ENSMUST00000143116.2	ENSMUSG00000028563.17	Tm2d1	chr4	protein_coding	TM2 domain containing 1
chr4	98253873;98263265	98263157;98268855	-	98253873	98268855	cassetteExon	0.5	100	100	ENSMUST00000143116.2	ENSMUSG00000028563.17	Tm2d1	chr4	protein_coding	TM2 domain containing 1
chr4	98284161	98293616	+	98284074	98293616	A5SS	0.5	50	50	ENSMUST00000141796.2	ENSMUSG00000061859.18	Patj	chr4	protein_coding	PATJ, crumbs cell polarity complex component
chr4	98511926	98538605	+	98511926;98526999	98526928;98538605	ES	0.5	50	50	ENSMUST00000238306.2	ENSMUSG00000061859.18	Patj	chr4	protein_coding	PATJ, crumbs cell polarity complex component
chr4	98540795	98562431	+	98540795;98555896	98555813;98562431	ES	0.5	50	50	ENSMUST00000238306.2	ENSMUSG00000061859.18	Patj	chr4	protein_coding	PATJ, crumbs cell polarity complex component
chr4	98592338	98606146	+	98592338;98598096	98598021;98606146	ES	0.5	50	50	ENSMUST00000238306.2	ENSMUSG00000061859.18	Patj	chr4	protein_coding	PATJ, crumbs cell polarity complex component
chr4	98325707	98329303	+	98325707	98329291	A3SS	0.5	50	50	ENSMUST00000238306.2	ENSMUSG00000061859.18	Patj	chr4	protein_coding	PATJ, crumbs cell polarity complex component
chr4	98332044	98342597	+	98332044	98344367	A3SS	0.5	50	50	ENSMUST00000238306.2	ENSMUSG00000061859.18	Patj	chr4	protein_coding	PATJ, crumbs cell polarity complex component
chr4	98427295	98442062	+	98427295	98457176	A3SS	0.5	50	50	ENSMUST00000238306.2	ENSMUSG00000061859.18	Patj	chr4	protein_coding	PATJ, crumbs cell polarity complex component
chr4	98338910	98344367	+	98332044	98344367	A5SS	0.5	50	50	ENSMUST00000238306.2	ENSMUSG00000061859.18	Patj	chr4	protein_coding	PATJ, crumbs cell polarity complex component
chr4	98435241	98457176	+	98427295	98457176	A5SS	0.5	50	50	ENSMUST00000238306.2	ENSMUSG00000061859.18	Patj	chr4	protein_coding	PATJ, crumbs cell polarity complex component
chr4	98615077	98621380	+	98615077	98615632	A3SS&ES	0.5	50	50	ENSMUST00000152889.9	ENSMUSG00000087166.10	L1td1	chr4	protein_coding	LINE-1 type transposase domain containing 1
chr4	98615707	98621380	+	98615707	98621360	A3SS	0.5	50	50	ENSMUST00000152889.9	ENSMUSG00000087166.10	L1td1	chr4	protein_coding	LINE-1 type transposase domain containing 1
chr4	98615077	98621380	+	98615077;98615707	98615632;98621380	ES	0.5	50	50	ENSMUST00000154279.3	ENSMUSG00000087166.10	L1td1	chr4	protein_coding	LINE-1 type transposase domain containing 1
chr4	98653842	98659493	-	98644822	98659493	A3SS	0.5	50	50	ENSMUST00000137270.2	ENSMUSG00000035407.9	Kank4	chr4	protein_coding	KN motif and ankyrin repeat domains 4
chr4	98644822	98649640	-	98644822	98659493	A5SS	0.5	50	50	ENSMUST00000137270.2	ENSMUSG00000035407.9	Kank4	chr4	protein_coding	KN motif and ankyrin repeat domains 4
chr4	98812480	98816471	+	98812480;98814911	98814692;98816471	ES	0.5	50	50	ENSMUST00000030289.9	ENSMUSG00000028560.12	Usp1	chr4	protein_coding	ubiquitin specific peptidase 1
chr4	98812480	98814673	+	98812480	98814692	A3SS	0.33	50	50	ENSMUST00000030289.9	ENSMUSG00000028560.12	Usp1	chr4	protein_coding	ubiquitin specific peptidase 1
chr4	98812480	98816471	+	98812480;98814911	98814673;98816471	ES	0.5	50	50	ENSMUST00000091358.11	ENSMUSG00000028560.12	Usp1	chr4	protein_coding	ubiquitin specific peptidase 1
chr4	98879696	98881884	-	98879696;98880695	98880606;98881884	ES	0.5	50	50	ENSMUST00000030286.14	ENSMUSG00000028556.16	Dock7	chr4	protein_coding	dedicator of cytokinesis 7
chr4	98880695	98889270	-	98880695;98881973	98881884;98889270	ES	0.33	50	50	ENSMUST00000030286.14	ENSMUSG00000028556.16	Dock7	chr4	protein_coding	dedicator of cytokinesis 7
chr4	98905002	98911579	-	98905002;98908328	98908258;98911579	ES	0.5	50	50	ENSMUST00000030286.14	ENSMUSG00000028556.16	Dock7	chr4	protein_coding	dedicator of cytokinesis 7
chr4	98842117	98843553	-	98835000	98843553	A3SS	0.33	50	50	ENSMUST00000030286.14	ENSMUSG00000028556.16	Dock7	chr4	protein_coding	dedicator of cytokinesis 7
chr4	98842160	98843553	-	98835000	98843553	A3SS	0.33	50	50	ENSMUST00000030286.14	ENSMUSG00000028556.16	Dock7	chr4	protein_coding	dedicator of cytokinesis 7
chr4	98835000	98840501	-	98835000	98843553	A5SS	0.5	50	50	ENSMUST00000030286.14	ENSMUSG00000028556.16	Dock7	chr4	protein_coding	dedicator of cytokinesis 7
chr4	98847406	98848363	-	98847406	98849574	A5SS	0.5	50	50	ENSMUST00000030286.14	ENSMUSG00000028556.16	Dock7	chr4	protein_coding	dedicator of cytokinesis 7
chr4	98859128	98861342	-	98859128	98861364	A5SS	0.5	50	50	ENSMUST00000030286.14	ENSMUSG00000028556.16	Dock7	chr4	protein_coding	dedicator of cytokinesis 7
chr4	98896400	98896520	-	98896400	98897490	A5SS	0.5	50	50	ENSMUST00000030286.14	ENSMUSG00000028556.16	Dock7	chr4	protein_coding	dedicator of cytokinesis 7
chr4	98842160	98843553	-	98842117	98843553	A3SS	0.33	50	50	ENSMUST00000127417.3	ENSMUSG00000028556.16	Dock7	chr4	protein_coding	dedicator of cytokinesis 7
chr4	98834991	98843023	-	98834991	98842103	A5SS&ES	0.5	50	50	ENSMUST00000127417.3	ENSMUSG00000028556.16	Dock7	chr4	protein_coding	dedicator of cytokinesis 7
chr4	98879696	98889270	-	98879696;98880695	98880606;98889270	ES	0.33	50	50	ENSMUST00000124466.8	ENSMUSG00000028556.16	Dock7	chr4	protein_coding	dedicator of cytokinesis 7
chr4	98879696;98881973	98881884;98889270	-	98879696;98880695	98880606;98889270	MXE	0.5	100	100	ENSMUST00000124466.8	ENSMUSG00000028556.16	Dock7	chr4	protein_coding	dedicator of cytokinesis 7
chr4	98879696;98881973	98881884;98889270	-	98879696	98889270	cassetteExon	0.5	100	100	ENSMUST00000150254.8	ENSMUSG00000028556.16	Dock7	chr4	protein_coding	dedicator of cytokinesis 7
chr4	98921604	98923066	+	98921604;98922795	98922682;98923066	ES	0.5	50	50	ENSMUST00000030280.7	ENSMUSG00000028553.13	Angptl3	chr4	protein_coding	angiopoietin-like 3
chr4	98923161	98925607	+	98923161	98932226	A3SS	0.5	50	50	ENSMUST00000125546.2	ENSMUSG00000028553.13	Angptl3	chr4	protein_coding	angiopoietin-like 3
chr4	99082520	99100814	+	99082689	99100814	A5SS	0.5	50	50	ENSMUST00000030279.15	ENSMUSG00000028550.16	Atg4c	chr4	protein_coding	autophagy related 4C, cysteine peptidase
chr4	99615184	99636923	+	99615184	99634563	3pMXE	0.25	50	50	ENSMUST00000141870.8	ENSMUSG00000073792.12	Alg6	chr4	protein_coding	asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase)
chr4	99615184;99632862	99632727;99634563	+	99615184	99634563	cassetteExon	0.5	100	100	ENSMUST00000141870.8	ENSMUSG00000073792.12	Alg6	chr4	protein_coding	asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase)
chr4	99615184	99626361	+	99615184	99634563	A3SS	0.25	50	50	ENSMUST00000141870.8	ENSMUSG00000073792.12	Alg6	chr4	protein_coding	asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase)
chr4	99615184	99626361	+	99615184	99632727	A3SS	0.25	50	50	ENSMUST00000107004.9	ENSMUSG00000073792.12	Alg6	chr4	protein_coding	asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase)
chr4	99632177	99632727	+	99615184	99632727	A5SS	0.5	50	50	ENSMUST00000107004.9	ENSMUSG00000073792.12	Alg6	chr4	protein_coding	asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase)
chr4	99615184;99634648	99634563;99636923	+	99615184	99636923	cassetteExon	0.5	100	100	ENSMUST00000139799.3	ENSMUSG00000073792.12	Alg6	chr4	protein_coding	asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase)
chr4	99615184	99626361	+	99615184	99636923	A3SS	0.25	50	50	ENSMUST00000139799.3	ENSMUSG00000073792.12	Alg6	chr4	protein_coding	asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase)
chr4	99615184	99632727	+	99615184	99636923	A3SS	0.25	50	50	ENSMUST00000139799.3	ENSMUSG00000073792.12	Alg6	chr4	protein_coding	asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase)
chr4	99677916	99690334	-	99677916;99686999	99686933;99690334	ES	0.5	50	50	ENSMUST00000146258.2	ENSMUSG00000028549.18	Itgb3bp	chr4	protein_coding	integrin beta 3 binding protein (beta3-endonexin)
chr4	99660626	99668999	-	99657778	99668999	A3SS	0.5	50	50	ENSMUST00000146258.2	ENSMUSG00000028549.18	Itgb3bp	chr4	protein_coding	integrin beta 3 binding protein (beta3-endonexin)
chr4	99702337	99717114	-	99702337	99717320	A5SS	0.5	50	50	ENSMUST00000146258.2	ENSMUSG00000028549.18	Itgb3bp	chr4	protein_coding	integrin beta 3 binding protein (beta3-endonexin)
chr4	99677916	99702295	-	99677916	99686933	A5SS&ES	0.33	50	50	ENSMUST00000123830.8	ENSMUSG00000028549.18	Itgb3bp	chr4	protein_coding	integrin beta 3 binding protein (beta3-endonexin)
chr4	99690469	99702295	-	99690469	99785783	A5SS	0.5	50	50	ENSMUST00000123830.8	ENSMUSG00000028549.18	Itgb3bp	chr4	protein_coding	integrin beta 3 binding protein (beta3-endonexin)
chr4	99677916	99702295	-	99677916;99690469	99690334;99702295	ES	0.5	50	50	ENSMUST00000102786.11	ENSMUSG00000028549.18	Itgb3bp	chr4	protein_coding	integrin beta 3 binding protein (beta3-endonexin)
chr4	99719817	99732649	+	99719817;99731708	99731497;99732649	ES	0.33	50	50	ENSMUST00000239516.1	ENSMUSG00000073791.14	Efcab7	chr4	protein_coding	EF-hand calcium binding domain 7
chr4	99717791	99719627	+	99717691	99719627	A5SS	0.5	50	50	ENSMUST00000239516.1	ENSMUSG00000073791.14	Efcab7	chr4	protein_coding	EF-hand calcium binding domain 7
chr4	99717791	99732649	+	99731708	99732649	A5SS&ES	0.33	50	50	ENSMUST00000239516.1	ENSMUSG00000073791.14	Efcab7	chr4	protein_coding	EF-hand calcium binding domain 7
chr4	99717791;99719817	99719627;99732649	+	99717791	99732649	cassetteExon	0.5	100	100	ENSMUST00000239517.1	ENSMUSG00000073791.14	Efcab7	chr4	protein_coding	EF-hand calcium binding domain 7
chr4	99717791;99719817	99719630;99732649	+	99717791	99732649	cassetteExon	0.5	100	100	ENSMUST00000239517.1	ENSMUSG00000073791.14	Efcab7	chr4	protein_coding	EF-hand calcium binding domain 7
chr4	99717791	99719630	+	99717772	99719630	A5SS	0.5	50	50	ENSMUST00000239518.1	ENSMUSG00000073791.14	Efcab7	chr4	protein_coding	EF-hand calcium binding domain 7
chr4	99717791	99719630	+	99717791	99719627	A3SS	0.33	50	50	ENSMUST00000239519.1	ENSMUSG00000073791.14	Efcab7	chr4	protein_coding	EF-hand calcium binding domain 7
chr4	99717791	99732649	+	99719817	99732649	A5SS&ES	0.33	50	50	ENSMUST00000239521.1	ENSMUSG00000073791.14	Efcab7	chr4	protein_coding	EF-hand calcium binding domain 7
chr4	99813490	99818653	+	99787008	99818653	A5SS	0.5	50	50	ENSMUST00000058351.16	ENSMUSG00000025791.19	Pgm1	chr4	protein_coding	phosphoglucomutase 1
chr4	100336444	100339979	+	100336444;100338884	100338803;100339979	ES	0.5	50	50	ENSMUST00000133493.9	ENSMUSG00000069733.12	Ube2u	chr4	protein_coding	ubiquitin-conjugating enzyme E2U (putative)
chr4	100852033	100886223	+	100852033	100860059	3pMXE	0.5	50	50	ENSMUST00000030257.15	ENSMUSG00000028532.15	Cachd1	chr4	protein_coding	cache domain containing 1
chr4	100851842	100851932	+	100851309	100851932	A5SS	0.5	50	50	ENSMUST00000030257.15	ENSMUSG00000028532.15	Cachd1	chr4	protein_coding	cache domain containing 1
chr4	100951691	100953450	+	100926526	100953450	A5SS	0.5	50	50	ENSMUST00000106955.2	ENSMUSG00000035275.15	Raver2	chr4	protein_coding	ribonucleoprotein, PTB-binding 2
chr4	101046399	101050980	-	101046399;101048870	101048672;101050980	ES	0.5	50	50	ENSMUST00000102781.10	ENSMUSG00000028530.15	Jak1	chr4	protein_coding	Janus kinase 1
chr4	101051060;101055177	101054973;101122239	-	101051060	101122239	cassetteExon	0.5	100	100	ENSMUST00000102781.10	ENSMUSG00000028530.15	Jak1	chr4	protein_coding	Janus kinase 1
chr4	101051060;101114749	101114690;101122239	-	101051060	101122239	cassetteExon	0.5	100	100	ENSMUST00000102781.10	ENSMUSG00000028530.15	Jak1	chr4	protein_coding	Janus kinase 1
chr4	101056111	101122239	-	101051060	101122239	A3SS	0.25	50	50	ENSMUST00000102781.10	ENSMUSG00000028530.15	Jak1	chr4	protein_coding	Janus kinase 1
chr4	101041687	101042556	-	101041687	101046276	A5SS	0.5	50	50	ENSMUST00000102781.10	ENSMUSG00000028530.15	Jak1	chr4	protein_coding	Janus kinase 1
chr4	101055177;101056111	101056066;101122239	-	101055177	101122239	cassetteExon	0.5	100	100	ENSMUST00000132292.2	ENSMUSG00000028530.15	Jak1	chr4	protein_coding	Janus kinase 1
chr4	101051060;101114749	101114690;101122239	-	101051060;101055177	101054973;101122239	MXE	0.5	100	100	ENSMUST00000132292.2	ENSMUSG00000028530.15	Jak1	chr4	protein_coding	Janus kinase 1
chr4	101046399	101050980	-	101048870	101050980	3pMXE	0.5	50	50	ENSMUST00000149297.2	ENSMUSG00000028530.15	Jak1	chr4	protein_coding	Janus kinase 1
chr4	101056111	101122239	-	101114749	101122239	A3SS&ES	0.25	50	50	ENSMUST00000149297.2	ENSMUSG00000028530.15	Jak1	chr4	protein_coding	Janus kinase 1
chr4	101231520	101248140	+	101231520	101256087	A3SS	0.5	50	50	ENSMUST00000123107.8	ENSMUSG00000087361.8	0610043K17Rik	chr4	lncRNA	RIKEN cDNA 0610043K17 gene
chr4	101223872	101224187	+	101211085	101224187	A5SS	0.5	50	50	ENSMUST00000123107.8	ENSMUSG00000087361.8	0610043K17Rik	chr4	lncRNA	RIKEN cDNA 0610043K17 gene
chr4	101277162	101317697	+	101277162;101304476	101304357;101317697	ES	0.5	50	50	ENSMUST00000102780.8	ENSMUSG00000028527.19	Ak4	chr4	protein_coding	adenylate kinase 4
chr4	101317869	101320185	+	101317869	101320146	A3SS	0.5	50	50	ENSMUST00000102780.8	ENSMUSG00000028527.19	Ak4	chr4	protein_coding	adenylate kinase 4
chr4	101276598	101276926	+	101276567	101276926	A5SS	0.33	50	50	ENSMUST00000102780.8	ENSMUSG00000028527.19	Ak4	chr4	protein_coding	adenylate kinase 4
chr4	101276753	101276926	+	101276567	101276926	A5SS	0.33	50	50	ENSMUST00000102780.8	ENSMUSG00000028527.19	Ak4	chr4	protein_coding	adenylate kinase 4
chr4	101277944	101304357	+	101277162	101304357	A5SS	0.5	50	50	ENSMUST00000102780.8	ENSMUSG00000028527.19	Ak4	chr4	protein_coding	adenylate kinase 4
chr4	101276598	101276926	+	101276753	101276926	A5SS	0.33	50	50	ENSMUST00000106946.8	ENSMUSG00000028527.19	Ak4	chr4	protein_coding	adenylate kinase 4
chr4	101277162	101317697	+	101304476	101317697	5pMXE	0.5	50	50	ENSMUST00000155749.2	ENSMUSG00000028527.19	Ak4	chr4	protein_coding	adenylate kinase 4
chr4	101353960;101389259	101389195;101454998	+	101353960	101454998	cassetteExon	0.5	100	100	ENSMUST00000154120.9	ENSMUSG00000028528.18	Dnajc6	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C6
chr4	101365379	101454998	+	101353960	101454998	A5SS	0.25	50	50	ENSMUST00000154120.9	ENSMUSG00000028528.18	Dnajc6	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C6
chr4	101408052	101454998	+	101353960	101454998	A5SS	0.25	50	50	ENSMUST00000154120.9	ENSMUSG00000028528.18	Dnajc6	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C6
chr4	101365379	101389195	+	101353960	101389195	A5SS	0.5	50	50	ENSMUST00000106930.8	ENSMUSG00000028528.18	Dnajc6	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C6
chr4	101365379	101454998	+	101389259	101454998	A5SS&ES	0.25	50	50	ENSMUST00000106930.8	ENSMUSG00000028528.18	Dnajc6	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C6
chr4	101408052	101454998	+	101389259	101454998	A5SS	0.25	50	50	ENSMUST00000106930.8	ENSMUSG00000028528.18	Dnajc6	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C6
chr4	101365379;101389259	101389195;101454998	+	101365379	101454998	cassetteExon	0.5	100	100	ENSMUST00000038207.12	ENSMUSG00000028528.18	Dnajc6	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C6
chr4	101408052	101454998	+	101365379	101454998	A5SS	0.25	50	50	ENSMUST00000038207.12	ENSMUSG00000028528.18	Dnajc6	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C6
chr4	101509671	101513375	+	101509671	101513306	A3SS	0.5	50	50	ENSMUST00000030254.15	ENSMUSG00000035212.15	Leprot	chr4	protein_coding	leptin receptor overlapping transcript
chr4	101631480	101636596	+	101631480	101637102	A3SS	0.5	50	50	ENSMUST00000102777.10	ENSMUSG00000057722.18	Lepr	chr4	protein_coding	leptin receptor
chr4	101574700	101585207	+	101575135	101585207	A5SS	0.5	50	50	ENSMUST00000102777.10	ENSMUSG00000057722.18	Lepr	chr4	protein_coding	leptin receptor
chr4	101646161	101646460	+	101639924	101646460	A5SS	0.5	50	50	ENSMUST00000102777.10	ENSMUSG00000057722.18	Lepr	chr4	protein_coding	leptin receptor
chr4	101649267	101671645	+	101649267	101668545	3pMXE	0.5	50	50	ENSMUST00000106921.9	ENSMUSG00000057722.18	Lepr	chr4	protein_coding	leptin receptor
chr4	102344602	102354951	+	102344602;102354855	102354819;102354951	ES	0.5	50	50	ENSMUST00000106911.8	ENSMUSG00000028525.17	Pde4b	chr4	protein_coding	phosphodiesterase 4B, cAMP specific
chr4	102363239	102399366	+	102363239	102427963	A3SS	0.25	50	50	ENSMUST00000106911.8	ENSMUSG00000028525.17	Pde4b	chr4	protein_coding	phosphodiesterase 4B, cAMP specific
chr4	102363239	102412816	+	102363239	102427963	A3SS	0.25	50	50	ENSMUST00000106911.8	ENSMUSG00000028525.17	Pde4b	chr4	protein_coding	phosphodiesterase 4B, cAMP specific
chr4	102363239	102413162	+	102363239	102427963	A3SS	0.25	50	50	ENSMUST00000106911.8	ENSMUSG00000028525.17	Pde4b	chr4	protein_coding	phosphodiesterase 4B, cAMP specific
chr4	102112653	102344408	+	102052271	102344408	A5SS	0.2	50	50	ENSMUST00000106911.8	ENSMUSG00000028525.17	Pde4b	chr4	protein_coding	phosphodiesterase 4B, cAMP specific
chr4	102279017	102344408	+	102052271	102344408	A5SS	0.2	50	50	ENSMUST00000106911.8	ENSMUSG00000028525.17	Pde4b	chr4	protein_coding	phosphodiesterase 4B, cAMP specific
chr4	102287371	102344408	+	102052271	102344408	A5SS	0.2	50	50	ENSMUST00000106911.8	ENSMUSG00000028525.17	Pde4b	chr4	protein_coding	phosphodiesterase 4B, cAMP specific
chr4	102327660	102344408	+	102052271	102344408	A5SS	0.2	50	50	ENSMUST00000106911.8	ENSMUSG00000028525.17	Pde4b	chr4	protein_coding	phosphodiesterase 4B, cAMP specific
chr4	102444849	102448028	+	102428075	102448028	A5SS	0.33	50	50	ENSMUST00000106911.8	ENSMUSG00000028525.17	Pde4b	chr4	protein_coding	phosphodiesterase 4B, cAMP specific
chr4	102447398	102448028	+	102428075	102448028	A5SS	0.33	50	50	ENSMUST00000106911.8	ENSMUSG00000028525.17	Pde4b	chr4	protein_coding	phosphodiesterase 4B, cAMP specific
chr4	102363239	102399366	+	102363239	102413162	A3SS	0.25	50	50	ENSMUST00000173119.8	ENSMUSG00000028525.17	Pde4b	chr4	protein_coding	phosphodiesterase 4B, cAMP specific
chr4	102363239	102412816	+	102363239	102413162	A3SS	0.25	50	50	ENSMUST00000173119.8	ENSMUSG00000028525.17	Pde4b	chr4	protein_coding	phosphodiesterase 4B, cAMP specific
chr4	102112653;102279017	102278746;102344408	+	102112653	102344408	cassetteExon	0.5	100	100	ENSMUST00000106907.9	ENSMUSG00000028525.17	Pde4b	chr4	protein_coding	phosphodiesterase 4B, cAMP specific
chr4	102363239	102399366	+	102363239	102412816	A3SS	0.25	50	50	ENSMUST00000106907.9	ENSMUSG00000028525.17	Pde4b	chr4	protein_coding	phosphodiesterase 4B, cAMP specific
chr4	102287371	102344408	+	102112653	102344408	A5SS	0.2	50	50	ENSMUST00000106907.9	ENSMUSG00000028525.17	Pde4b	chr4	protein_coding	phosphodiesterase 4B, cAMP specific
chr4	102327660	102344408	+	102112653	102344408	A5SS	0.2	50	50	ENSMUST00000106907.9	ENSMUSG00000028525.17	Pde4b	chr4	protein_coding	phosphodiesterase 4B, cAMP specific
chr4	102287371	102344408	+	102279017	102344408	A5SS	0.25	50	50	ENSMUST00000174186.2	ENSMUSG00000028525.17	Pde4b	chr4	protein_coding	phosphodiesterase 4B, cAMP specific
chr4	102327660	102344408	+	102279017	102344408	A5SS	0.25	50	50	ENSMUST00000174186.2	ENSMUSG00000028525.17	Pde4b	chr4	protein_coding	phosphodiesterase 4B, cAMP specific
chr4	102112653	102344408	+	102279017	102344408	5pMXE	0.2	50	50	ENSMUST00000106904.9	ENSMUSG00000028525.17	Pde4b	chr4	protein_coding	phosphodiesterase 4B, cAMP specific
chr4	102327660	102344408	+	102287371	102344408	A5SS	0.2	50	50	ENSMUST00000172616.2	ENSMUSG00000028525.17	Pde4b	chr4	protein_coding	phosphodiesterase 4B, cAMP specific
chr4	102447398	102448028	+	102444849	102448028	A5SS	0.33	50	50	ENSMUST00000030251.13	ENSMUSG00000028525.17	Pde4b	chr4	protein_coding	phosphodiesterase 4B, cAMP specific
chr4	102617762	102717967	+	102617762;102710143	102710080;102717967	ES	0.5	50	50	ENSMUST00000097948.9	ENSMUSG00000028524.22	Sgip1	chr4	protein_coding	SH3-domain GRB2-like (endophilin) interacting protein 1
chr4	102717991	102724837	+	102717991;102720930	102720859;102724837	ES	0.5	50	50	ENSMUST00000097948.9	ENSMUSG00000028524.22	Sgip1	chr4	protein_coding	SH3-domain GRB2-like (endophilin) interacting protein 1
chr4	102717991;102719136	102719053;102720859	+	102717991	102720859	cassetteExon	0.5	100	100	ENSMUST00000097948.9	ENSMUSG00000028524.22	Sgip1	chr4	protein_coding	SH3-domain GRB2-like (endophilin) interacting protein 1
chr4	102717991	102720862	+	102717991	102720859	A3SS	0.25	50	50	ENSMUST00000097948.9	ENSMUSG00000028524.22	Sgip1	chr4	protein_coding	SH3-domain GRB2-like (endophilin) interacting protein 1
chr4	102616752	102617640	+	102598563	102617640	A5SS	0.5	50	50	ENSMUST00000097948.9	ENSMUSG00000028524.22	Sgip1	chr4	protein_coding	SH3-domain GRB2-like (endophilin) interacting protein 1
chr4	102727921	102757723	+	102727921	102739180	3pMXE	0.25	50	50	ENSMUST00000142430.8	ENSMUSG00000028524.22	Sgip1	chr4	protein_coding	SH3-domain GRB2-like (endophilin) interacting protein 1
chr4	102727921	102766005	+	102727921	102739180	3pMXE	0.25	50	50	ENSMUST00000142430.8	ENSMUSG00000028524.22	Sgip1	chr4	protein_coding	SH3-domain GRB2-like (endophilin) interacting protein 1
chr4	102727921	102766935	+	102727921	102739180	3pMXE	0.25	50	50	ENSMUST00000142430.8	ENSMUSG00000028524.22	Sgip1	chr4	protein_coding	SH3-domain GRB2-like (endophilin) interacting protein 1
chr4	102717991	102724837	+	102717991;102720930	102720862;102724837	ES	0.5	50	50	ENSMUST00000066824.14	ENSMUSG00000028524.22	Sgip1	chr4	protein_coding	SH3-domain GRB2-like (endophilin) interacting protein 1
chr4	102786109	102813296	+	102786109;102791802	102791743;102813296	ES	0.5	50	50	ENSMUST00000066824.14	ENSMUSG00000028524.22	Sgip1	chr4	protein_coding	SH3-domain GRB2-like (endophilin) interacting protein 1
chr4	102776052;102778716	102778219;102784658	+	102776052	102784658	cassetteExon	0.5	100	100	ENSMUST00000066824.14	ENSMUSG00000028524.22	Sgip1	chr4	protein_coding	SH3-domain GRB2-like (endophilin) interacting protein 1
chr4	102786109;102790827	102790762;102791743	+	102786109	102791743	cassetteExon	0.5	100	100	ENSMUST00000066824.14	ENSMUSG00000028524.22	Sgip1	chr4	protein_coding	SH3-domain GRB2-like (endophilin) interacting protein 1
chr4	102717991	102719053	+	102717991	102720862	A3SS	0.25	50	50	ENSMUST00000066824.14	ENSMUSG00000028524.22	Sgip1	chr4	protein_coding	SH3-domain GRB2-like (endophilin) interacting protein 1
chr4	102784782	102785738	+	102784782	102785983	A3SS	0.5	50	50	ENSMUST00000066824.14	ENSMUSG00000028524.22	Sgip1	chr4	protein_coding	SH3-domain GRB2-like (endophilin) interacting protein 1
chr4	102786109	102790762	+	102786109	102813296	A3SS	0.33	50	50	ENSMUST00000072481.12	ENSMUSG00000028524.22	Sgip1	chr4	protein_coding	SH3-domain GRB2-like (endophilin) interacting protein 1
chr4	102717991	102719053	+	102717991	102724837	A3SS	0.25	50	50	ENSMUST00000156596.8	ENSMUSG00000028524.22	Sgip1	chr4	protein_coding	SH3-domain GRB2-like (endophilin) interacting protein 1
chr4	102727921;102766029	102766005;102766935	+	102727921	102766935	cassetteExon	0.5	100	100	ENSMUST00000183855.8	ENSMUSG00000028524.22	Sgip1	chr4	protein_coding	SH3-domain GRB2-like (endophilin) interacting protein 1
chr4	102727921	102757723	+	102727921	102766935	A3SS	0.25	50	50	ENSMUST00000183855.8	ENSMUSG00000028524.22	Sgip1	chr4	protein_coding	SH3-domain GRB2-like (endophilin) interacting protein 1
chr4	102727921	102757723	+	102727921	102766005	A3SS	0.25	50	50	ENSMUST00000149547.2	ENSMUSG00000028524.22	Sgip1	chr4	protein_coding	SH3-domain GRB2-like (endophilin) interacting protein 1
chr4	102762773	102766005	+	102727921	102766005	A5SS	0.5	50	50	ENSMUST00000149547.2	ENSMUSG00000028524.22	Sgip1	chr4	protein_coding	SH3-domain GRB2-like (endophilin) interacting protein 1
chr4	102776052	102784658	+	102778716	102784658	5pMXE	0.5	50	50	ENSMUST00000131431.2	ENSMUSG00000028524.22	Sgip1	chr4	protein_coding	SH3-domain GRB2-like (endophilin) interacting protein 1
chr4	102843783	102849692	+	102843783;102845870	102845753;102849692	ES	0.25	50	50	ENSMUST00000220547.2	ENSMUSG00000028523.15	Dynlt5	chr4	protein_coding	dynein light chain Tctex-type 5
chr4	102836009	102837423	+	102836009	102837441	A3SS	0.5	50	50	ENSMUST00000220547.2	ENSMUSG00000028523.15	Dynlt5	chr4	protein_coding	dynein light chain Tctex-type 5
chr4	102843783	102845721	+	102843783	102845753	A3SS	0.33	50	50	ENSMUST00000220547.2	ENSMUSG00000028523.15	Dynlt5	chr4	protein_coding	dynein light chain Tctex-type 5
chr4	102849224	102849692	+	102845870	102849692	A5SS	0.25	50	50	ENSMUST00000220547.2	ENSMUSG00000028523.15	Dynlt5	chr4	protein_coding	dynein light chain Tctex-type 5
chr4	102837562;102843783	102843743;102849692	+	102837562	102849692	cassetteExon	0.5	100	100	ENSMUST00000223169.2	ENSMUSG00000028523.15	Dynlt5	chr4	protein_coding	dynein light chain Tctex-type 5
chr4	102845870	102849692	+	102837562	102849692	A5SS	0.25	50	50	ENSMUST00000223169.2	ENSMUSG00000028523.15	Dynlt5	chr4	protein_coding	dynein light chain Tctex-type 5
chr4	102849224	102849692	+	102837562	102849692	A5SS	0.25	50	50	ENSMUST00000223169.2	ENSMUSG00000028523.15	Dynlt5	chr4	protein_coding	dynein light chain Tctex-type 5
chr4	102837562	102849692	+	102843783	102849692	5pMXE	0.25	50	50	ENSMUST00000125417.9	ENSMUSG00000028523.15	Dynlt5	chr4	protein_coding	dynein light chain Tctex-type 5
chr4	102843783;102845870	102845721;102849692	+	102843783	102849692	cassetteExon	0.5	100	100	ENSMUST00000125417.9	ENSMUSG00000028523.15	Dynlt5	chr4	protein_coding	dynein light chain Tctex-type 5
chr4	102849224	102849692	+	102843783	102849692	A5SS	0.25	50	50	ENSMUST00000125417.9	ENSMUSG00000028523.15	Dynlt5	chr4	protein_coding	dynein light chain Tctex-type 5
chr4	102843783	102849692	+	102845870	102849692	5pMXE	0.25	50	50	ENSMUST00000116317.9	ENSMUSG00000028523.15	Dynlt5	chr4	protein_coding	dynein light chain Tctex-type 5
chr4	102907394	102917075	-	102907394;102916936	102916815;102917075	ES	0.5	50	50	ENSMUST00000138960.8	ENSMUSG00000035126.20	Dnai4	chr4	protein_coding	dynein axonemal intermediate chain 4
chr4	102905563;102906822	102906596;102907296	-	102905563	102907296	cassetteExon	0.5	100	100	ENSMUST00000138960.8	ENSMUSG00000035126.20	Dnai4	chr4	protein_coding	dynein axonemal intermediate chain 4
chr4	102919644;102921747	102921661;102923457	-	102919644	102923457	cassetteExon	0.5	100	100	ENSMUST00000138960.8	ENSMUSG00000035126.20	Dnai4	chr4	protein_coding	dynein axonemal intermediate chain 4
chr4	102896538	102898609	-	102896538	102905407	A5SS	0.5	50	50	ENSMUST00000138960.8	ENSMUSG00000035126.20	Dnai4	chr4	protein_coding	dynein axonemal intermediate chain 4
chr4	102972020	102972757	+	102971716	102972757	A5SS	0.33	50	50	ENSMUST00000136092.2	ENSMUSG00000028522.17	Mier1	chr4	protein_coding	MEIR1 treanscription regulator
chr4	102972189	102972757	+	102971716	102972757	A5SS	0.33	50	50	ENSMUST00000136092.2	ENSMUSG00000028522.17	Mier1	chr4	protein_coding	MEIR1 treanscription regulator
chr4	102984494;102986610	102986538;102988163	+	102984494	102988163	cassetteExon	0.5	100	100	ENSMUST00000106858.8	ENSMUSG00000028522.17	Mier1	chr4	protein_coding	MEIR1 treanscription regulator
chr4	102972857	102975436	+	102972857	102975439	A3SS	0.33	50	50	ENSMUST00000106858.8	ENSMUSG00000028522.17	Mier1	chr4	protein_coding	MEIR1 treanscription regulator
chr4	102972857	102975478	+	102972857	102975439	A3SS	0.33	50	50	ENSMUST00000106858.8	ENSMUSG00000028522.17	Mier1	chr4	protein_coding	MEIR1 treanscription regulator
chr4	102976706	102984470	+	102975512	102984470	A5SS	0.5	50	50	ENSMUST00000106858.8	ENSMUSG00000028522.17	Mier1	chr4	protein_coding	MEIR1 treanscription regulator
chr4	102972857	102975436	+	102972857	102975478	A3SS	0.33	50	50	ENSMUST00000137348.8	ENSMUSG00000028522.17	Mier1	chr4	protein_coding	MEIR1 treanscription regulator
chr4	102974560	102975478	+	102972857	102975478	A5SS	0.5	50	50	ENSMUST00000137348.8	ENSMUSG00000028522.17	Mier1	chr4	protein_coding	MEIR1 treanscription regulator
chr4	102972189	102972757	+	102972020	102972757	A5SS	0.33	50	50	ENSMUST00000143417.8	ENSMUSG00000028522.17	Mier1	chr4	protein_coding	MEIR1 treanscription regulator
chr4	103048096	103062303	-	103042101	103062303	A3SS	0.5	50	50	ENSMUST00000150285.8	ENSMUSG00000028521.18	Slc35d1	chr4	protein_coding	solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1
chr4	103042101	103046984	-	103042101	103062303	A5SS	0.5	50	50	ENSMUST00000150285.8	ENSMUSG00000028521.18	Slc35d1	chr4	protein_coding	solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1
chr4	103128048	103147496	-	103128048;103141676	103141585;103147496	ES	0.5	50	50	ENSMUST00000030245.10	ENSMUSG00000028520.13	4921539E11Rik	chr4	protein_coding	RIKEN cDNA 4921539E11 gene
chr4	103092685	103092828	-	103088712	103092828	A3SS	0.5	50	50	ENSMUST00000030245.10	ENSMUSG00000028520.13	4921539E11Rik	chr4	protein_coding	RIKEN cDNA 4921539E11 gene
chr4	103210848	103228929	+	103210848	103223170	3pMXE	0.5	50	50	ENSMUST00000035780.4	ENSMUSG00000035069.4	Oma1	chr4	protein_coding	OMA1 zinc metallopeptidase
chr4	103181772	103182216	+	103179065	103182216	A5SS	0.5	50	50	ENSMUST00000035780.4	ENSMUSG00000035069.4	Oma1	chr4	protein_coding	OMA1 zinc metallopeptidase
chr4	103239791;103291129	103291079;103348792	+	103239791;103262559	103261861;103348792	MXE	0.5	100	100	ENSMUST00000156144.2	ENSMUSG00000086136.2	Gm12718	chr4	lncRNA	predicted gene 12718
chr4	103239791	103261861	+	103239791	103291079	A3SS	0.5	50	50	ENSMUST00000150345.2	ENSMUSG00000086136.2	Gm12718	chr4	lncRNA	predicted gene 12718
chr4	103262559	103348792	+	103291129	103348792	A5SS&ES	0.5	50	50	ENSMUST00000150345.2	ENSMUSG00000086136.2	Gm12718	chr4	lncRNA	predicted gene 12718
chr4	104019147	104336271	+	104019147	104035043	3pMXE	0.5	50	50	ENSMUST00000143294.8	ENSMUSG00000028519.17	Dab1	chr4	protein_coding	disabled 1
chr4	104537305	104538795	+	104537305	104537388	3pMXE	0.5	50	50	ENSMUST00000106827.8	ENSMUSG00000028519.17	Dab1	chr4	protein_coding	disabled 1
chr4	104224666	104336271	+	104019147	104336271	A5SS	0.33	50	50	ENSMUST00000106827.8	ENSMUSG00000028519.17	Dab1	chr4	protein_coding	disabled 1
chr4	104224914	104336271	+	104019147	104336271	A5SS	0.33	50	50	ENSMUST00000106827.8	ENSMUSG00000028519.17	Dab1	chr4	protein_coding	disabled 1
chr4	104369461	104462495	+	104336472	104462495	A5SS	0.33	50	50	ENSMUST00000106827.8	ENSMUSG00000028519.17	Dab1	chr4	protein_coding	disabled 1
chr4	104448566	104462495	+	104336472	104462495	A5SS	0.33	50	50	ENSMUST00000106827.8	ENSMUSG00000028519.17	Dab1	chr4	protein_coding	disabled 1
chr4	104224914	104336271	+	104224666	104336271	A5SS	0.33	50	50	ENSMUST00000143644.8	ENSMUSG00000028519.17	Dab1	chr4	protein_coding	disabled 1
chr4	104536769	104545580	+	104536769;104538860	104538795;104545580	ES	0.5	50	50	ENSMUST00000146078.8	ENSMUSG00000028519.17	Dab1	chr4	protein_coding	disabled 1
chr4	104545639	104575407	+	104545639;104561670	104561401;104575407	ES	0.5	50	50	ENSMUST00000146078.8	ENSMUSG00000028519.17	Dab1	chr4	protein_coding	disabled 1
chr4	104536769;104537305	104537267;104538795	+	104536769	104538795	cassetteExon	0.5	100	100	ENSMUST00000146078.8	ENSMUSG00000028519.17	Dab1	chr4	protein_coding	disabled 1
chr4	104545639	104570819	+	104545639	104561401	A3SS&ES	0.33	50	50	ENSMUST00000146078.8	ENSMUSG00000028519.17	Dab1	chr4	protein_coding	disabled 1
chr4	104545639	104570819	+	104545639	104575407	A3SS	0.33	50	50	ENSMUST00000106830.9	ENSMUSG00000028519.17	Dab1	chr4	protein_coding	disabled 1
chr4	104536769	104538795	+	104536769	104537267	3pMXE	0.33	50	50	ENSMUST00000106826.8	ENSMUSG00000028519.17	Dab1	chr4	protein_coding	disabled 1
chr4	104536769	104545580	+	104536769	104537267	3pMXE	0.33	50	50	ENSMUST00000106826.8	ENSMUSG00000028519.17	Dab1	chr4	protein_coding	disabled 1
chr4	104448566	104462495	+	104369461	104462495	A5SS	0.33	50	50	ENSMUST00000106826.8	ENSMUSG00000028519.17	Dab1	chr4	protein_coding	disabled 1
chr4	104641728	104647672	+	104641728;104644195	104643998;104647672	ES	0.5	50	50	ENSMUST00000031663.10	ENSMUSG00000029656.14	C8b	chr4	protein_coding	complement component 8, beta polypeptide
chr4	104656710	104657532	+	104650588	104657532	A5SS	0.5	50	50	ENSMUST00000031663.10	ENSMUSG00000029656.14	C8b	chr4	protein_coding	complement component 8, beta polypeptide
chr4	104703332	104710939	-	104673309	104710939	A3SS	0.5	50	50	ENSMUST00000152146.2	ENSMUSG00000035031.16	C8a	chr4	protein_coding	complement component 8, alpha polypeptide
chr4	104719937;104722744	104722651;104733477	-	104719937	104733477	cassetteExon	0.5	100	100	ENSMUST00000106808.10	ENSMUSG00000035031.16	C8a	chr4	protein_coding	complement component 8, alpha polypeptide
chr4	106215671	106216213	+	106215671	106216210	A3SS	0.5	50	50	ENSMUST00000165709.8	ENSMUSG00000028514.16	Usp24	chr4	protein_coding	ubiquitin specific peptidase 24
chr4	106345267	106359938	-	106345267	106349062	5pMXE	0.5	50	50	ENSMUST00000054472.4	ENSMUSG00000025418.8	Bsnd	chr4	protein_coding	barttin CLCNK type accessory beta subunit
chr4	106360287	106379516	-	106360287	106362844	5pMXE	0.33	50	50	ENSMUST00000238873.2	ENSMUSG00000118551.2	Gm53010	chr4	lncRNA	predicted gene, 53010
chr4	106360287	106392091	-	106360287	106362844	5pMXE	0.33	50	50	ENSMUST00000238873.2	ENSMUSG00000118551.2	Gm53010	chr4	lncRNA	predicted gene, 53010
chr4	106356440	106359938	-	106345267	106359938	A3SS	0.25	50	50	ENSMUST00000238873.2	ENSMUSG00000118551.2	Gm53010	chr4	lncRNA	predicted gene, 53010
chr4	106356769	106359938	-	106345267	106359938	A3SS	0.25	50	50	ENSMUST00000238873.2	ENSMUSG00000118551.2	Gm53010	chr4	lncRNA	predicted gene, 53010
chr4	106359242	106359938	-	106345267	106359938	A3SS	0.25	50	50	ENSMUST00000238873.2	ENSMUSG00000118551.2	Gm53010	chr4	lncRNA	predicted gene, 53010
chr4	106360287;106392172	106392091;106397557	-	106360287;106379604	106379516;106397557	MXE	0.5	100	100	ENSMUST00000238822.2	ENSMUSG00000118551.2	Gm53010	chr4	lncRNA	predicted gene, 53010
chr4	106356440;106356769	106356651;106359938	-	106356440	106359938	cassetteExon	0.5	100	100	ENSMUST00000238833.2	ENSMUSG00000085933.4	Tmem61	chr4	protein_coding	transmembrane protein 61
chr4	106356440;106359242	106359121;106359938	-	106356440	106359938	cassetteExon	0.5	100	100	ENSMUST00000238833.2	ENSMUSG00000085933.4	Tmem61	chr4	protein_coding	transmembrane protein 61
chr4	106360287	106392091	-	106360078	106392091	A3SS	0.5	50	50	ENSMUST00000239042.2	ENSMUSG00000085933.4	Tmem61	chr4	protein_coding	transmembrane protein 61
chr4	106356440;106359242	106359121;106359938	-	106356440;106356769	106356651;106359938	MXE	0.5	100	100	ENSMUST00000239147.2	ENSMUSG00000085933.4	Tmem61	chr4	protein_coding	transmembrane protein 61
chr4	106448206	106448628	-	106448206	106448713	A5SS	0.5	50	50	ENSMUST00000126324.7	ENSMUSG00000054362.10	Lexm	chr4	protein_coding	lymphocyte expansion molecule
chr4	106508345	106509466	+	106508345	106510315	A3SS	0.5	50	50	ENSMUST00000106782.2	ENSMUSG00000043572.8	Pars2	chr4	protein_coding	prolyl-tRNA synthetase (mitochondrial)(putative)
chr4	106508328	106510315	+	106508345	106510315	A5SS	0.5	50	50	ENSMUST00000106782.2	ENSMUSG00000043572.8	Pars2	chr4	protein_coding	prolyl-tRNA synthetase (mitochondrial)(putative)
chr4	106508328	106510315	+	106508328	106509466	A3SS	0.5	50	50	ENSMUST00000106781.2	ENSMUSG00000043572.8	Pars2	chr4	protein_coding	prolyl-tRNA synthetase (mitochondrial)(putative)
chr4	106508345	106509466	+	106508328	106509466	A5SS	0.5	50	50	ENSMUST00000106781.2	ENSMUSG00000043572.8	Pars2	chr4	protein_coding	prolyl-tRNA synthetase (mitochondrial)(putative)
chr4	106520428	106524693	-	106520428;106522935	106522853;106524693	ES	0.5	50	50	ENSMUST00000026480.13	ENSMUSG00000025413.14	Ttc4	chr4	protein_coding	tetratricopeptide repeat domain 4
chr4	106528945;106529081	106529025;106531608	-	106528945	106531608	cassetteExon	0.5	100	100	ENSMUST00000026480.13	ENSMUSG00000025413.14	Ttc4	chr4	protein_coding	tetratricopeptide repeat domain 4
chr4	106531685	106533930	-	106531685	106533795	A5SS	0.5	50	50	ENSMUST00000026480.13	ENSMUSG00000025413.14	Ttc4	chr4	protein_coding	tetratricopeptide repeat domain 4
chr4	106535499	106535691	-	106535499	106535950	A5SS	0.5	50	50	ENSMUST00000026480.13	ENSMUSG00000025413.14	Ttc4	chr4	protein_coding	tetratricopeptide repeat domain 4
chr4	106525451	106527646	-	106522935	106527646	A3SS	0.5	50	50	ENSMUST00000106772.10	ENSMUSG00000025413.14	Ttc4	chr4	protein_coding	tetratricopeptide repeat domain 4
chr4	106520428	106524693	-	106520428	106522853	A5SS&ES	0.5	50	50	ENSMUST00000106772.10	ENSMUSG00000025413.14	Ttc4	chr4	protein_coding	tetratricopeptide repeat domain 4
chr4	106522935	106524693	-	106522935	106527646	A5SS	0.5	50	50	ENSMUST00000106772.10	ENSMUSG00000025413.14	Ttc4	chr4	protein_coding	tetratricopeptide repeat domain 4
chr4	106549614	106552188	-	106549614;106551626	106551512;106552188	ES	0.5	50	50	ENSMUST00000106770.8	ENSMUSG00000047502.15	Mroh7	chr4	protein_coding	maestro heat-like repeat family member 7
chr4	106552325	106557324	-	106552325;106557109	106556919;106557324	ES	0.5	50	50	ENSMUST00000106770.8	ENSMUSG00000047502.15	Mroh7	chr4	protein_coding	maestro heat-like repeat family member 7
chr4	106557109	106559680	-	106557109;106557462	106557324;106559680	ES	0.5	50	50	ENSMUST00000106770.8	ENSMUSG00000047502.15	Mroh7	chr4	protein_coding	maestro heat-like repeat family member 7
chr4	106557462	106560212	-	106557462;106559834	106559680;106560212	ES	0.5	50	50	ENSMUST00000106770.8	ENSMUSG00000047502.15	Mroh7	chr4	protein_coding	maestro heat-like repeat family member 7
chr4	106571341	106579704	-	106571341;106578750	106577572;106579704	ES	0.5	50	50	ENSMUST00000106770.8	ENSMUSG00000047502.15	Mroh7	chr4	protein_coding	maestro heat-like repeat family member 7
chr4	106579738	106585149	-	106579738	106584952	5pMXE	0.33	50	50	ENSMUST00000106770.8	ENSMUSG00000047502.15	Mroh7	chr4	protein_coding	maestro heat-like repeat family member 7
chr4	106579738	106588071	-	106579738	106584952	5pMXE	0.33	50	50	ENSMUST00000106770.8	ENSMUSG00000047502.15	Mroh7	chr4	protein_coding	maestro heat-like repeat family member 7
chr4	106541208	106547423	-	106541208	106547412	A5SS	0.5	50	50	ENSMUST00000106770.8	ENSMUSG00000047502.15	Mroh7	chr4	protein_coding	maestro heat-like repeat family member 7
chr4	106552325;106557109	106556919;106559680	-	106552325;106557462	106557324;106559680	MXE	0.5	100	100	ENSMUST00000135000.8	ENSMUSG00000047502.15	Mroh7	chr4	protein_coding	maestro heat-like repeat family member 7
chr4	106557462	106560212	-	106557462	106559680	A5SS	0.5	50	50	ENSMUST00000135000.8	ENSMUSG00000047502.15	Mroh7	chr4	protein_coding	maestro heat-like repeat family member 7
chr4	106552325;106557462	106557324;106560212	-	106552325;106559834	106556919;106560212	MXE	0.5	100	100	ENSMUST00000145374.8	ENSMUSG00000047502.15	Mroh7	chr4	protein_coding	maestro heat-like repeat family member 7
chr4	106557109;106557462	106557324;106560212	-	106557109;106559834	106559680;106560212	MXE	0.5	100	100	ENSMUST00000145374.8	ENSMUSG00000047502.15	Mroh7	chr4	protein_coding	maestro heat-like repeat family member 7
chr4	106552325	106557324	-	106552325	106556919	5pMXE	0.5	50	50	ENSMUST00000142954.2	ENSMUSG00000047502.15	Mroh7	chr4	protein_coding	maestro heat-like repeat family member 7
chr4	106579738	106588071	-	106579738	106585149	5pMXE	0.33	50	50	ENSMUST00000145044.2	ENSMUSG00000047502.15	Mroh7	chr4	protein_coding	maestro heat-like repeat family member 7
chr4	106578750	106579704	-	106571341	106579704	A3SS	0.5	50	50	ENSMUST00000145044.2	ENSMUSG00000047502.15	Mroh7	chr4	protein_coding	maestro heat-like repeat family member 7
chr4	106571341	106577572	-	106571341	106579704	A5SS	0.5	50	50	ENSMUST00000145044.2	ENSMUSG00000047502.15	Mroh7	chr4	protein_coding	maestro heat-like repeat family member 7
chr4	106620651	106628540	-	106620651;106627970	106627901;106628540	ES	0.33	50	50	ENSMUST00000102762.10	ENSMUSG00000034853.17	Acot11	chr4	protein_coding	acyl-CoA thioesterase 11
chr4	106628753	106657407	-	106628753	106656881	5pMXE	0.25	50	50	ENSMUST00000102762.10	ENSMUSG00000034853.17	Acot11	chr4	protein_coding	acyl-CoA thioesterase 11
chr4	106628753	106662103	-	106628753	106656881	5pMXE	0.25	50	50	ENSMUST00000102762.10	ENSMUSG00000034853.17	Acot11	chr4	protein_coding	acyl-CoA thioesterase 11
chr4	106628753;106656760	106656605;106656881	-	106628753	106656881	cassetteExon	0.5	100	100	ENSMUST00000102762.10	ENSMUSG00000034853.17	Acot11	chr4	protein_coding	acyl-CoA thioesterase 11
chr4	106611072	106611271	-	106610994	106611271	A3SS	0.5	50	50	ENSMUST00000102762.10	ENSMUSG00000034853.17	Acot11	chr4	protein_coding	acyl-CoA thioesterase 11
chr4	106628753	106656605	-	106628753	106662103	A5SS	0.25	50	50	ENSMUST00000065253.13	ENSMUSG00000034853.17	Acot11	chr4	protein_coding	acyl-CoA thioesterase 11
chr4	106628753	106657407	-	106628753	106662103	A5SS	0.25	50	50	ENSMUST00000065253.13	ENSMUSG00000034853.17	Acot11	chr4	protein_coding	acyl-CoA thioesterase 11
chr4	106619740	106628540	-	106619740;106620651	106620591;106628540	ES	0.33	50	50	ENSMUST00000140541.8	ENSMUSG00000034853.17	Acot11	chr4	protein_coding	acyl-CoA thioesterase 11
chr4	106627970	106628540	-	106619740	106628540	A3SS	0.33	50	50	ENSMUST00000156567.2	ENSMUSG00000034853.17	Acot11	chr4	protein_coding	acyl-CoA thioesterase 11
chr4	106628753	106656605	-	106628753	106657407	A5SS	0.25	50	50	ENSMUST00000148688.2	ENSMUSG00000034853.17	Acot11	chr4	protein_coding	acyl-CoA thioesterase 11
chr4	106866965	106885390	+	106866965;106884494	106884414;106885390	ES	0.5	50	50	ENSMUST00000150915.8	ENSMUSG00000061887.15	Ssbp3	chr4	protein_coding	single-stranded DNA binding protein 3
chr4	106884494	106888059	+	106884494;106885449	106885390;106888059	ES	0.33	50	50	ENSMUST00000150915.8	ENSMUSG00000061887.15	Ssbp3	chr4	protein_coding	single-stranded DNA binding protein 3
chr4	106769109	106770100	+	106767945	106770100	A5SS	0.33	50	50	ENSMUST00000150915.8	ENSMUSG00000061887.15	Ssbp3	chr4	protein_coding	single-stranded DNA binding protein 3
chr4	106769555	106770100	+	106767945	106770100	A5SS	0.33	50	50	ENSMUST00000150915.8	ENSMUSG00000061887.15	Ssbp3	chr4	protein_coding	single-stranded DNA binding protein 3
chr4	106780534	106866876	+	106772926	106866876	A5SS	0.2	50	50	ENSMUST00000150915.8	ENSMUSG00000061887.15	Ssbp3	chr4	protein_coding	single-stranded DNA binding protein 3
chr4	106799151	106866876	+	106772926	106866876	A5SS	0.2	50	50	ENSMUST00000150915.8	ENSMUSG00000061887.15	Ssbp3	chr4	protein_coding	single-stranded DNA binding protein 3
chr4	106813325	106866876	+	106772926	106866876	A5SS	0.2	50	50	ENSMUST00000150915.8	ENSMUSG00000061887.15	Ssbp3	chr4	protein_coding	single-stranded DNA binding protein 3
chr4	106823711	106866876	+	106772926	106866876	A5SS	0.2	50	50	ENSMUST00000150915.8	ENSMUSG00000061887.15	Ssbp3	chr4	protein_coding	single-stranded DNA binding protein 3
chr4	106888288	106894109	+	106888288	106894133	A3SS	0.5	50	50	ENSMUST00000030367.15	ENSMUSG00000061887.15	Ssbp3	chr4	protein_coding	single-stranded DNA binding protein 3
chr4	106769555	106770100	+	106769109	106770100	A5SS	0.33	50	50	ENSMUST00000030367.15	ENSMUSG00000061887.15	Ssbp3	chr4	protein_coding	single-stranded DNA binding protein 3
chr4	106866965;106884494	106884414;106888059	+	106866965	106888059	cassetteExon	0.5	100	100	ENSMUST00000149926.8	ENSMUSG00000061887.15	Ssbp3	chr4	protein_coding	single-stranded DNA binding protein 3
chr4	106866965;106885449	106885390;106888059	+	106866965	106888059	cassetteExon	0.5	100	100	ENSMUST00000149926.8	ENSMUSG00000061887.15	Ssbp3	chr4	protein_coding	single-stranded DNA binding protein 3
chr4	106866965;106884494	106884414;106888059	+	106866965;106885449	106885390;106888059	MXE	0.5	100	100	ENSMUST00000072753.13	ENSMUSG00000061887.15	Ssbp3	chr4	protein_coding	single-stranded DNA binding protein 3
chr4	106799151	106866876	+	106780534	106866876	A5SS	0.2	50	50	ENSMUST00000148842.8	ENSMUSG00000061887.15	Ssbp3	chr4	protein_coding	single-stranded DNA binding protein 3
chr4	106813325	106866876	+	106780534	106866876	A5SS	0.2	50	50	ENSMUST00000148842.8	ENSMUSG00000061887.15	Ssbp3	chr4	protein_coding	single-stranded DNA binding protein 3
chr4	106823711	106866876	+	106780534	106866876	A5SS	0.2	50	50	ENSMUST00000148842.8	ENSMUSG00000061887.15	Ssbp3	chr4	protein_coding	single-stranded DNA binding protein 3
chr4	106813325	106866876	+	106799151	106866876	A5SS	0.2	50	50	ENSMUST00000141963.8	ENSMUSG00000061887.15	Ssbp3	chr4	protein_coding	single-stranded DNA binding protein 3
chr4	106823711	106866876	+	106799151	106866876	A5SS	0.2	50	50	ENSMUST00000141963.8	ENSMUSG00000061887.15	Ssbp3	chr4	protein_coding	single-stranded DNA binding protein 3
chr4	106823711	106866876	+	106813325	106866876	A5SS	0.2	50	50	ENSMUST00000124936.8	ENSMUSG00000061887.15	Ssbp3	chr4	protein_coding	single-stranded DNA binding protein 3
chr4	106866965	106888059	+	106885449	106888059	5pMXE	0.33	50	50	ENSMUST00000137786.2	ENSMUSG00000061887.15	Ssbp3	chr4	protein_coding	single-stranded DNA binding protein 3
chr4	106884494	106888059	+	106885449	106888059	5pMXE	0.33	50	50	ENSMUST00000137786.2	ENSMUSG00000061887.15	Ssbp3	chr4	protein_coding	single-stranded DNA binding protein 3
chr4	106914772	106919080	-	106914772;106917837	106917680;106919080	ES	0.5	50	50	ENSMUST00000030365.6	ENSMUSG00000028622.12	Mrpl37	chr4	protein_coding	mitochondrial ribosomal protein L37
chr4	106919263	106923647	-	106921967	106923647	A3SS&ES	0.5	50	50	ENSMUST00000030365.6	ENSMUSG00000028622.12	Mrpl37	chr4	protein_coding	mitochondrial ribosomal protein L37
chr4	106934977	106938088	+	106934977	106935191	3pMXE	0.33	50	50	ENSMUST00000156406.8	ENSMUSG00000028621.18	Cyb5rl	chr4	protein_coding	cytochrome b5 reductase-like
chr4	106934977	106941324	+	106934977	106935191	3pMXE	0.33	50	50	ENSMUST00000156406.8	ENSMUSG00000028621.18	Cyb5rl	chr4	protein_coding	cytochrome b5 reductase-like
chr4	106924242	106925741	+	106924242	106925809	A3SS	0.5	50	50	ENSMUST00000156406.8	ENSMUSG00000028621.18	Cyb5rl	chr4	protein_coding	cytochrome b5 reductase-like
chr4	106924238	106925809	+	106924242	106925809	A5SS	0.5	50	50	ENSMUST00000156406.8	ENSMUSG00000028621.18	Cyb5rl	chr4	protein_coding	cytochrome b5 reductase-like
chr4	106926020	106928067	+	106927744	106928067	A5SS	0.33	50	50	ENSMUST00000156406.8	ENSMUSG00000028621.18	Cyb5rl	chr4	protein_coding	cytochrome b5 reductase-like
chr4	106926393	106928067	+	106927744	106928067	A5SS	0.33	50	50	ENSMUST00000156406.8	ENSMUSG00000028621.18	Cyb5rl	chr4	protein_coding	cytochrome b5 reductase-like
chr4	106931157	106938088	+	106931157;106934977	106934873;106938088	ES	0.5	50	50	ENSMUST00000106758.8	ENSMUSG00000028621.18	Cyb5rl	chr4	protein_coding	cytochrome b5 reductase-like
chr4	106934977	106941324	+	106934977;106938291	106938088;106941324	ES	0.5	50	50	ENSMUST00000106758.8	ENSMUSG00000028621.18	Cyb5rl	chr4	protein_coding	cytochrome b5 reductase-like
chr4	106938291	106944494	+	106938291	106941324	3pMXE	0.33	50	50	ENSMUST00000106758.8	ENSMUSG00000028621.18	Cyb5rl	chr4	protein_coding	cytochrome b5 reductase-like
chr4	106926020;106926393	106926293;106928067	+	106926020	106928067	cassetteExon	0.5	100	100	ENSMUST00000106758.8	ENSMUSG00000028621.18	Cyb5rl	chr4	protein_coding	cytochrome b5 reductase-like
chr4	106931157	106942511	+	106931157	106934873	A3SS&ES	0.33	50	50	ENSMUST00000106758.8	ENSMUSG00000028621.18	Cyb5rl	chr4	protein_coding	cytochrome b5 reductase-like
chr4	106938291	106938417	+	106938291	106941324	A3SS	0.33	50	50	ENSMUST00000106758.8	ENSMUSG00000028621.18	Cyb5rl	chr4	protein_coding	cytochrome b5 reductase-like
chr4	106924238	106925741	+	106924242	106925741	A5SS	0.5	50	50	ENSMUST00000145324.8	ENSMUSG00000028621.18	Cyb5rl	chr4	protein_coding	cytochrome b5 reductase-like
chr4	106931157;106938291	106938088;106944494	+	106931157;106942590	106942511;106944494	MXE	0.5	100	100	ENSMUST00000106760.8	ENSMUSG00000028621.18	Cyb5rl	chr4	protein_coding	cytochrome b5 reductase-like
chr4	106924238	106925741	+	106924238	106925809	A3SS	0.5	50	50	ENSMUST00000106760.8	ENSMUSG00000028621.18	Cyb5rl	chr4	protein_coding	cytochrome b5 reductase-like
chr4	106944078	106944494	+	106942590	106944494	A5SS	0.33	50	50	ENSMUST00000106760.8	ENSMUSG00000028621.18	Cyb5rl	chr4	protein_coding	cytochrome b5 reductase-like
chr4	106931157;106934977	106934873;106941324	+	106931157;106938291	106938088;106941324	MXE	0.5	100	100	ENSMUST00000030364.13	ENSMUSG00000028621.18	Cyb5rl	chr4	protein_coding	cytochrome b5 reductase-like
chr4	106931157	106942511	+	106931157	106938088	A3SS&ES	0.33	50	50	ENSMUST00000030364.13	ENSMUSG00000028621.18	Cyb5rl	chr4	protein_coding	cytochrome b5 reductase-like
chr4	106934977	106941324	+	106934977	106938088	A3SS&ES	0.33	50	50	ENSMUST00000126207.2	ENSMUSG00000028621.18	Cyb5rl	chr4	protein_coding	cytochrome b5 reductase-like
chr4	106938291	106938417	+	106938291	106944494	A3SS	0.33	50	50	ENSMUST00000127916.2	ENSMUSG00000028621.18	Cyb5rl	chr4	protein_coding	cytochrome b5 reductase-like
chr4	106942590	106944494	+	106938291	106944494	A5SS	0.33	50	50	ENSMUST00000127916.2	ENSMUSG00000028621.18	Cyb5rl	chr4	protein_coding	cytochrome b5 reductase-like
chr4	106944078	106944494	+	106938291	106944494	A5SS	0.33	50	50	ENSMUST00000127916.2	ENSMUSG00000028621.18	Cyb5rl	chr4	protein_coding	cytochrome b5 reductase-like
chr4	107004905	107034762	-	107004905;107022886	107022745;107034762	ES	0.25	50	50	ENSMUST00000057043.10	ENSMUSG00000028619.16	Tceanc2	chr4	protein_coding	transcription elongation factor A (SII) N-terminal and central domain containing 2
chr4	107034901	107036109	-	107034901	107035435	5pMXE	0.25	50	50	ENSMUST00000057043.10	ENSMUSG00000028619.16	Tceanc2	chr4	protein_coding	transcription elongation factor A (SII) N-terminal and central domain containing 2
chr4	107034901	107036160	-	107034901	107035435	5pMXE	0.25	50	50	ENSMUST00000057043.10	ENSMUSG00000028619.16	Tceanc2	chr4	protein_coding	transcription elongation factor A (SII) N-terminal and central domain containing 2
chr4	107030336	107034762	-	107022886	107034762	A3SS	0.25	50	50	ENSMUST00000057043.10	ENSMUSG00000028619.16	Tceanc2	chr4	protein_coding	transcription elongation factor A (SII) N-terminal and central domain containing 2
chr4	107033821	107034762	-	107022886	107034762	A3SS	0.25	50	50	ENSMUST00000057043.10	ENSMUSG00000028619.16	Tceanc2	chr4	protein_coding	transcription elongation factor A (SII) N-terminal and central domain containing 2
chr4	107034923	107035435	-	107034901	107035435	A3SS	0.5	50	50	ENSMUST00000057043.10	ENSMUSG00000028619.16	Tceanc2	chr4	protein_coding	transcription elongation factor A (SII) N-terminal and central domain containing 2
chr4	107034901	107035137	-	107034901	107035435	A5SS	0.25	50	50	ENSMUST00000057043.10	ENSMUSG00000028619.16	Tceanc2	chr4	protein_coding	transcription elongation factor A (SII) N-terminal and central domain containing 2
chr4	107030336	107034762	-	107004905	107034762	A3SS	0.25	50	50	ENSMUST00000127720.8	ENSMUSG00000028619.16	Tceanc2	chr4	protein_coding	transcription elongation factor A (SII) N-terminal and central domain containing 2
chr4	107033821	107034762	-	107004905	107034762	A3SS	0.25	50	50	ENSMUST00000127720.8	ENSMUSG00000028619.16	Tceanc2	chr4	protein_coding	transcription elongation factor A (SII) N-terminal and central domain containing 2
chr4	107004905	107034762	-	107022886	107034762	A3SS&ES	0.25	50	50	ENSMUST00000129220.8	ENSMUSG00000028619.16	Tceanc2	chr4	protein_coding	transcription elongation factor A (SII) N-terminal and central domain containing 2
chr4	107034901	107035137	-	107034901	107036109	A5SS	0.25	50	50	ENSMUST00000030362.12	ENSMUSG00000028619.16	Tceanc2	chr4	protein_coding	transcription elongation factor A (SII) N-terminal and central domain containing 2
chr4	107034901	107036160	-	107034901	107036109	A5SS	0.25	50	50	ENSMUST00000030362.12	ENSMUSG00000028619.16	Tceanc2	chr4	protein_coding	transcription elongation factor A (SII) N-terminal and central domain containing 2
chr4	107034901	107035137	-	107034901	107036160	A5SS	0.25	50	50	ENSMUST00000141165.2	ENSMUSG00000028619.16	Tceanc2	chr4	protein_coding	transcription elongation factor A (SII) N-terminal and central domain containing 2
chr4	107033821	107034762	-	107030336	107034762	A3SS	0.25	50	50	ENSMUST00000147375.2	ENSMUSG00000028619.16	Tceanc2	chr4	protein_coding	transcription elongation factor A (SII) N-terminal and central domain containing 2
chr4	107036114	107044816	+	107036114;107043080	107042975;107044816	ES	0.5	50	50	ENSMUST00000030361.11	ENSMUSG00000028618.12	Tmem59	chr4	protein_coding	transmembrane protein 59
chr4	107035952	107042975	+	107036114	107042975	A5SS	0.33	50	50	ENSMUST00000030361.11	ENSMUSG00000028618.12	Tmem59	chr4	protein_coding	transmembrane protein 59
chr4	107036292	107042975	+	107036114	107042975	A5SS	0.33	50	50	ENSMUST00000030361.11	ENSMUSG00000028618.12	Tmem59	chr4	protein_coding	transmembrane protein 59
chr4	107036114	107044816	+	107043080	107044816	A5SS&ES	0.5	50	50	ENSMUST00000128123.3	ENSMUSG00000028618.12	Tmem59	chr4	protein_coding	transmembrane protein 59
chr4	107036114	107047732	+	107044910	107047732	A5SS&ES	0.5	50	50	ENSMUST00000128123.3	ENSMUSG00000028618.12	Tmem59	chr4	protein_coding	transmembrane protein 59
chr4	107036292	107042975	+	107035952	107042975	A5SS	0.33	50	50	ENSMUST00000128123.3	ENSMUSG00000028618.12	Tmem59	chr4	protein_coding	transmembrane protein 59
chr4	107036114;107044910	107044816;107047732	+	107036114	107047732	cassetteExon	0.5	100	100	ENSMUST00000106753.3	ENSMUSG00000028618.12	Tmem59	chr4	protein_coding	transmembrane protein 59
chr4	107036114	107042975	+	107036114	107047732	A3SS	0.33	50	50	ENSMUST00000106753.3	ENSMUSG00000028618.12	Tmem59	chr4	protein_coding	transmembrane protein 59
chr4	107091181;107091404	107091348;107092997	-	107091181	107092997	cassetteExon	0.5	100	100	ENSMUST00000030360.11	ENSMUSG00000028617.11	Lrrc42	chr4	protein_coding	leucine rich repeat containing 42
chr4	107104977	107110315	-	107104977	107110472	A5SS	0.5	50	50	ENSMUST00000030360.11	ENSMUSG00000028617.11	Lrrc42	chr4	protein_coding	leucine rich repeat containing 42
chr4	107119776	107120686	+	107119776	107130810	A3SS	0.33	50	50	ENSMUST00000152717.8	ENSMUSG00000063172.14	Hspb11	chr4	protein_coding	heat shock protein family B (small), member 11
chr4	107111159	107119664	+	107110924	107119664	A5SS	0.33	50	50	ENSMUST00000152717.8	ENSMUSG00000063172.14	Hspb11	chr4	protein_coding	heat shock protein family B (small), member 11
chr4	107111192	107119664	+	107110924	107119664	A5SS	0.33	50	50	ENSMUST00000152717.8	ENSMUSG00000063172.14	Hspb11	chr4	protein_coding	heat shock protein family B (small), member 11
chr4	107119776	107135124	+	107119776	107120686	3pMXE	0.33	50	50	ENSMUST00000156934.8	ENSMUSG00000063172.14	Hspb11	chr4	protein_coding	heat shock protein family B (small), member 11
chr4	107111159	107119664	+	107111192	107119664	A5SS	0.33	50	50	ENSMUST00000156934.8	ENSMUSG00000063172.14	Hspb11	chr4	protein_coding	heat shock protein family B (small), member 11
chr4	107119776	107130810	+	107119776	107135124	A3SS	0.33	50	50	ENSMUST00000137911.2	ENSMUSG00000063172.14	Hspb11	chr4	protein_coding	heat shock protein family B (small), member 11
chr4	107132488	107135124	+	107119776	107135124	A5SS	0.5	50	50	ENSMUST00000137911.2	ENSMUSG00000063172.14	Hspb11	chr4	protein_coding	heat shock protein family B (small), member 11
chr4	107149619	107154794	-	107149619;107151145	107150946;107154794	ES	0.5	50	50	ENSMUST00000082426.11	ENSMUSG00000034785.16	Dio1	chr4	protein_coding	deiodinase, iodothyronine, type I
chr4	107151145	107163979	-	107151145;107154937	107154794;107163979	ES	0.25	50	50	ENSMUST00000082426.11	ENSMUSG00000034785.16	Dio1	chr4	protein_coding	deiodinase, iodothyronine, type I
chr4	107157293	107163979	-	107154937	107163979	A3SS	0.25	50	50	ENSMUST00000082426.11	ENSMUSG00000034785.16	Dio1	chr4	protein_coding	deiodinase, iodothyronine, type I
chr4	107154937	107164088	-	107154937	107163979	A5SS	0.5	50	50	ENSMUST00000082426.11	ENSMUSG00000034785.16	Dio1	chr4	protein_coding	deiodinase, iodothyronine, type I
chr4	107149619	107163979	-	107149619;107154937	107154794;107163979	ES	0.25	50	50	ENSMUST00000150974.2	ENSMUSG00000034785.16	Dio1	chr4	protein_coding	deiodinase, iodothyronine, type I
chr4	107149619;107151145	107150946;107163979	-	107149619;107154937	107154794;107163979	MXE	0.5	100	100	ENSMUST00000150974.2	ENSMUSG00000034785.16	Dio1	chr4	protein_coding	deiodinase, iodothyronine, type I
chr4	107149619	107163979	-	107149619	107150946	A5SS&ES	0.33	50	50	ENSMUST00000134366.8	ENSMUSG00000034785.16	Dio1	chr4	protein_coding	deiodinase, iodothyronine, type I
chr4	107151145	107163979	-	107151145	107154794	A5SS&ES	0.5	50	50	ENSMUST00000134366.8	ENSMUSG00000034785.16	Dio1	chr4	protein_coding	deiodinase, iodothyronine, type I
chr4	107149619	107163979	-	107149619;107151145	107150946;107163979	ES	0.25	50	50	ENSMUST00000129138.2	ENSMUSG00000034785.16	Dio1	chr4	protein_coding	deiodinase, iodothyronine, type I
chr4	107157293	107163979	-	107151145	107163979	A3SS	0.25	50	50	ENSMUST00000129138.2	ENSMUSG00000034785.16	Dio1	chr4	protein_coding	deiodinase, iodothyronine, type I
chr4	107149619	107163979	-	107149619	107154794	A5SS&ES	0.33	50	50	ENSMUST00000147709.2	ENSMUSG00000034785.16	Dio1	chr4	protein_coding	deiodinase, iodothyronine, type I
chr4	107157293	107163979	-	107149619	107163979	A3SS	0.25	50	50	ENSMUST00000106748.2	ENSMUSG00000034785.16	Dio1	chr4	protein_coding	deiodinase, iodothyronine, type I
chr4	107173039	107193311	+	107173039;107176302	107176139;107193311	ES	0.33	50	50	ENSMUST00000075693.12	ENSMUSG00000057375.14	Yipf1	chr4	protein_coding	Yip1 domain family, member 1
chr4	107176302	107193634	+	107176302;107193391	107193311;107193634	ES	0.5	50	50	ENSMUST00000075693.12	ENSMUSG00000057375.14	Yipf1	chr4	protein_coding	Yip1 domain family, member 1
chr4	107202388	107216804	+	107202388;107207735	107207611;107216804	ES	0.5	50	50	ENSMUST00000075693.12	ENSMUSG00000057375.14	Yipf1	chr4	protein_coding	Yip1 domain family, member 1
chr4	107198299	107201685	+	107198299	107201709	A3SS	0.5	50	50	ENSMUST00000075693.12	ENSMUSG00000057375.14	Yipf1	chr4	protein_coding	Yip1 domain family, member 1
chr4	107171948	107172960	+	107171659	107172960	A5SS	0.33	50	50	ENSMUST00000075693.12	ENSMUSG00000057375.14	Yipf1	chr4	protein_coding	Yip1 domain family, member 1
chr4	107172477	107172960	+	107171659	107172960	A5SS	0.33	50	50	ENSMUST00000075693.12	ENSMUSG00000057375.14	Yipf1	chr4	protein_coding	Yip1 domain family, member 1
chr4	107192904	107193311	+	107176302	107193311	A5SS	0.33	50	50	ENSMUST00000075693.12	ENSMUSG00000057375.14	Yipf1	chr4	protein_coding	Yip1 domain family, member 1
chr4	107173039	107193311	+	107173039	107176139	3pMXE	0.5	50	50	ENSMUST00000140162.8	ENSMUSG00000057375.14	Yipf1	chr4	protein_coding	Yip1 domain family, member 1
chr4	107202388	107216804	+	107202388	107207611	3pMXE	0.5	50	50	ENSMUST00000139527.8	ENSMUSG00000057375.14	Yipf1	chr4	protein_coding	Yip1 domain family, member 1
chr4	107173039;107193391	107193311;107193634	+	107173039;107176302	107176139;107193634	MXE	0.5	100	100	ENSMUST00000139527.8	ENSMUSG00000057375.14	Yipf1	chr4	protein_coding	Yip1 domain family, member 1
chr4	107172477	107172960	+	107171948	107172960	A5SS	0.33	50	50	ENSMUST00000124650.2	ENSMUSG00000057375.14	Yipf1	chr4	protein_coding	Yip1 domain family, member 1
chr4	107192904	107193311	+	107173039	107193311	A5SS	0.33	50	50	ENSMUST00000146829.8	ENSMUSG00000057375.14	Yipf1	chr4	protein_coding	Yip1 domain family, member 1
chr4	107176302	107193311	+	107176302	107207611	A3SS	0.33	50	50	ENSMUST00000124254.2	ENSMUSG00000057375.14	Yipf1	chr4	protein_coding	Yip1 domain family, member 1
chr4	107176302	107193634	+	107176302	107207611	A3SS	0.33	50	50	ENSMUST00000124254.2	ENSMUSG00000057375.14	Yipf1	chr4	protein_coding	Yip1 domain family, member 1
chr4	107202388	107207611	+	107176302	107207611	A5SS	0.5	50	50	ENSMUST00000124254.2	ENSMUSG00000057375.14	Yipf1	chr4	protein_coding	Yip1 domain family, member 1
chr4	107202388	107216804	+	107207735	107216804	A5SS&ES	0.5	50	50	ENSMUST00000124254.2	ENSMUSG00000057375.14	Yipf1	chr4	protein_coding	Yip1 domain family, member 1
chr4	107225345	107228459	+	107225345;107226074	107225954;107228459	ES	0.5	50	50	ENSMUST00000139560.8	ENSMUSG00000028614.15	Ndc1	chr4	protein_coding	NDC1 transmembrane nucleoporin
chr4	107238407	107238873	+	107237903	107238873	A5SS	0.5	50	50	ENSMUST00000139560.8	ENSMUSG00000028614.15	Ndc1	chr4	protein_coding	NDC1 transmembrane nucleoporin
chr4	107247802	107252195	+	107250390	107252195	A5SS&ES	0.5	50	50	ENSMUST00000139560.8	ENSMUSG00000028614.15	Ndc1	chr4	protein_coding	NDC1 transmembrane nucleoporin
chr4	107232413	107237795	+	107232413	107268263	A3SS	0.5	50	50	ENSMUST00000125342.2	ENSMUSG00000028614.15	Ndc1	chr4	protein_coding	NDC1 transmembrane nucleoporin
chr4	107253029	107268263	+	107232413	107268263	A5SS	0.5	50	50	ENSMUST00000125342.2	ENSMUSG00000028614.15	Ndc1	chr4	protein_coding	NDC1 transmembrane nucleoporin
chr4	107292094	107292837	+	107291891	107292837	A5SS	0.5	50	50	ENSMUST00000130573.2	ENSMUSG00000034762.10	Glis1	chr4	protein_coding	GLIS family zinc finger 1
chr4	107296509	107421042	+	107293134	107421042	A5SS	0.5	50	50	ENSMUST00000135835.8	ENSMUSG00000034762.10	Glis1	chr4	protein_coding	GLIS family zinc finger 1
chr4	107480432	107488951	+	107480432;107484813	107484657;107488951	ES	0.5	50	50	ENSMUST00000046005.9	ENSMUSG00000034762.10	Glis1	chr4	protein_coding	GLIS family zinc finger 1
chr4	107472330;107475535	107475367;107476751	+	107472330	107476751	cassetteExon	0.5	100	100	ENSMUST00000046005.9	ENSMUSG00000034762.10	Glis1	chr4	protein_coding	GLIS family zinc finger 1
chr4	107438451	107472169	+	107425698	107472169	A5SS	0.5	50	50	ENSMUST00000046005.9	ENSMUSG00000034762.10	Glis1	chr4	protein_coding	GLIS family zinc finger 1
chr4	107480432	107488951	+	107480432	107484657	3pMXE	0.5	50	50	ENSMUST00000138211.8	ENSMUSG00000034762.10	Glis1	chr4	protein_coding	GLIS family zinc finger 1
chr4	107538051	107540777	-	107538051	107540663	A5SS	0.5	50	50	ENSMUST00000131776.8	ENSMUSG00000028610.17	Dmrtb1	chr4	protein_coding	DMRT-like family B with proline-rich C-terminal, 1
chr4	107563095	107565676	+	107563095	107572414	A3SS	0.5	50	50	ENSMUST00000143064.8	ENSMUSG00000085549.8	1700047F07Rik	chr4	lncRNA	RIKEN cDNA 1700047F07 gene
chr4	107572535	107574078	+	107572535	107616156	A3SS	0.5	50	50	ENSMUST00000143064.8	ENSMUSG00000085549.8	1700047F07Rik	chr4	lncRNA	RIKEN cDNA 1700047F07 gene
chr4	107564574	107572414	+	107563095	107572414	A5SS	0.5	50	50	ENSMUST00000143064.8	ENSMUSG00000085549.8	1700047F07Rik	chr4	lncRNA	RIKEN cDNA 1700047F07 gene
chr4	107564473	107565676	+	107563095	107565676	A5SS	0.5	50	50	ENSMUST00000151438.2	ENSMUSG00000085549.8	1700047F07Rik	chr4	lncRNA	RIKEN cDNA 1700047F07 gene
chr4	107646202	107646332	+	107646202	107646792	A3SS	0.5	50	50	ENSMUST00000203451.2	ENSMUSG00000087289.3	4933424M12Rik	chr4	lncRNA	RIKEN cDNA 4933424M12 gene
chr4	107691946	107704641	+	107691946;107700541	107700413;107704641	ES	0.33	50	50	ENSMUST00000238584.2	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107700541	107708505	+	107700541;107704763	107704641;107708505	ES	0.25	50	50	ENSMUST00000238584.2	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107708624	107711446	+	107708624;107708822	107708697;107711446	ES	0.33	50	50	ENSMUST00000238584.2	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107713002	107714378	+	107713002;107714172	107714054;107714378	ES	0.5	50	50	ENSMUST00000238584.2	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107717281	107721206	+	107717281;107718554	107718330;107721206	ES	0.5	50	50	ENSMUST00000238584.2	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107726347	107729470	+	107726347;107727385	107727209;107729470	ES	0.5	50	50	ENSMUST00000238584.2	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107700541;107703816	107703436;107704641	+	107700541	107704641	cassetteExon	0.5	100	100	ENSMUST00000238584.2	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107704763;107705600	107705478;107708505	+	107704763	107708505	cassetteExon	0.5	100	100	ENSMUST00000238584.2	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107704763;107707339	107707301;107708505	+	107704763	107708505	cassetteExon	0.5	100	100	ENSMUST00000238584.2	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107700541	107704638	+	107700541	107704641	A3SS	0.25	50	50	ENSMUST00000238584.2	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107726347	107727325	+	107726347	107727209	A3SS	0.33	50	50	ENSMUST00000238584.2	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107660159	107660448	+	107659715	107660448	A5SS	0.33	50	50	ENSMUST00000238584.2	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107660194	107660448	+	107659715	107660448	A5SS	0.33	50	50	ENSMUST00000238584.2	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107680516	107691824	+	107660567	107691824	A5SS	0.33	50	50	ENSMUST00000238584.2	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107688195	107691824	+	107660567	107691824	A5SS	0.33	50	50	ENSMUST00000238584.2	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107704739	107711446	+	107708822	107711446	A5SS&ES	0.33	50	50	ENSMUST00000238584.2	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107704763;107707339	107707301;107708505	+	107704763;107705600	107705478;107708505	MXE	0.5	100	100	ENSMUST00000106731.4	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107691946	107704641	+	107691946	107700413	A3SS&ES	0.5	50	50	ENSMUST00000106731.4	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107700541	107703436	+	107700541	107704638	A3SS	0.25	50	50	ENSMUST00000106731.4	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107726347;107727385	107727325;107729470	+	107726347	107729470	cassetteExon	0.5	100	100	ENSMUST00000106733.10	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107691946;107700541	107700413;107708505	+	107691946;107704763	107704641;107708505	MXE	0.5	100	100	ENSMUST00000238651.2	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107703816	107704641	+	107691946	107704641	A5SS	0.33	50	50	ENSMUST00000238651.2	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107691946;107704739	107704641;107711446	+	107691946;107708822	107700413;107711446	MXE	0.5	100	100	ENSMUST00000238421.2	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107700541;107704739	107704638;107711446	+	107700541;107708822	107708505;107711446	MXE	0.5	100	100	ENSMUST00000238421.2	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107700541;107704763	107704638;107708505	+	107700541	107708505	cassetteExon	0.5	100	100	ENSMUST00000238421.2	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107700541;107704739	107704641;107711446	+	107700541;107708822	107708505;107711446	MXE	0.5	100	100	ENSMUST00000238421.2	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107700541	107703436	+	107700541	107708505	A3SS	0.25	50	50	ENSMUST00000238421.2	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107705600	107708505	+	107700541	107708505	A5SS	0.25	50	50	ENSMUST00000238421.2	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107707339	107708505	+	107700541	107708505	A5SS	0.25	50	50	ENSMUST00000238421.2	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107660194	107660448	+	107660159	107660448	A5SS	0.33	50	50	ENSMUST00000147319.8	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107704739	107711446	+	107708624	107711446	A5SS&ES	0.33	50	50	ENSMUST00000146552.9	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107688195	107691824	+	107680516	107691824	A5SS	0.33	50	50	ENSMUST00000123140.8	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107700541	107704641	+	107703816	107704641	5pMXE	0.33	50	50	ENSMUST00000135591.2	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107704763	107707301	+	107704763	107705478	3pMXE	0.33	50	50	ENSMUST00000135591.2	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107704763	107708505	+	107704763	107705478	3pMXE	0.33	50	50	ENSMUST00000135591.2	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107717281	107721206	+	107718554	107721206	5pMXE	0.5	50	50	ENSMUST00000238693.2	ENSMUSG00000028613.16	Lrp8	chr4	protein_coding	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr4	107666034	107680131	-	107666034	107667960	5pMXE	0.5	50	50	ENSMUST00000097930.2	ENSMUSG00000073779.8	Lrp8os2	chr4	lncRNA	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor, opposite strand 2
chr4	107666034	107680131	-	107666034;107668143	107667960;107680131	ES	0.33	50	50	ENSMUST00000188737.7	ENSMUSG00000073779.8	Lrp8os2	chr4	lncRNA	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor, opposite strand 2
chr4	107668143;107673264	107673124;107680131	-	107668143	107680131	cassetteExon	0.5	100	100	ENSMUST00000188737.7	ENSMUSG00000073779.8	Lrp8os2	chr4	lncRNA	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor, opposite strand 2
chr4	107673264	107680131	-	107666034	107680131	A3SS	0.33	50	50	ENSMUST00000138289.2	ENSMUSG00000073779.8	Lrp8os2	chr4	lncRNA	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor, opposite strand 2
chr4	107747399	107749152	+	107747399;107748718	107748662;107749152	ES	0.5	50	50	ENSMUST00000135454.8	ENSMUSG00000028608.16	Czib	chr4	protein_coding	CXXC motif containing zinc binding protein
chr4	107748718	107749419	+	107748718;107749233	107749152;107749419	ES	0.5	50	50	ENSMUST00000135454.8	ENSMUSG00000028608.16	Czib	chr4	protein_coding	CXXC motif containing zinc binding protein
chr4	107750608	107754068	+	107750608;107752135	107752070;107754068	ES	0.33	50	50	ENSMUST00000135454.8	ENSMUSG00000028608.16	Czib	chr4	protein_coding	CXXC motif containing zinc binding protein
chr4	107752135;107753945	107753859;107754068	+	107752135	107754068	cassetteExon	0.5	100	100	ENSMUST00000135454.8	ENSMUSG00000028608.16	Czib	chr4	protein_coding	CXXC motif containing zinc binding protein
chr4	107748718	107749157	+	107748718	107749152	A3SS	0.33	50	50	ENSMUST00000135454.8	ENSMUSG00000028608.16	Czib	chr4	protein_coding	CXXC motif containing zinc binding protein
chr4	107752135	107752748	+	107752135	107754068	A3SS	0.33	50	50	ENSMUST00000135454.8	ENSMUSG00000028608.16	Czib	chr4	protein_coding	CXXC motif containing zinc binding protein
chr4	107747210	107747316	+	107747093	107747316	A5SS	0.5	50	50	ENSMUST00000135454.8	ENSMUSG00000028608.16	Czib	chr4	protein_coding	CXXC motif containing zinc binding protein
chr4	107747746	107748662	+	107747399	107748662	A5SS	0.5	50	50	ENSMUST00000135454.8	ENSMUSG00000028608.16	Czib	chr4	protein_coding	CXXC motif containing zinc binding protein
chr4	107753945	107754068	+	107750608	107754068	A5SS	0.33	50	50	ENSMUST00000106726.10	ENSMUSG00000028608.16	Czib	chr4	protein_coding	CXXC motif containing zinc binding protein
chr4	107747399;107749233	107749152;107749419	+	107747399;107748718	107748662;107749419	MXE	0.5	100	100	ENSMUST00000030347.12	ENSMUSG00000028608.16	Czib	chr4	protein_coding	CXXC motif containing zinc binding protein
chr4	107748718;107749233	107749157;107749419	+	107748718	107749419	cassetteExon	0.5	100	100	ENSMUST00000030347.12	ENSMUSG00000028608.16	Czib	chr4	protein_coding	CXXC motif containing zinc binding protein
chr4	107752135	107753859	+	107752135;107752783	107752748;107753859	ES	0.5	50	50	ENSMUST00000106727.10	ENSMUSG00000028608.16	Czib	chr4	protein_coding	CXXC motif containing zinc binding protein
chr4	107750608	107754068	+	107750608	107752070	A3SS&ES	0.5	50	50	ENSMUST00000106727.10	ENSMUSG00000028608.16	Czib	chr4	protein_coding	CXXC motif containing zinc binding protein
chr4	107752135	107753859	+	107752135	107752748	3pMXE	0.33	50	50	ENSMUST00000119394.8	ENSMUSG00000028608.16	Czib	chr4	protein_coding	CXXC motif containing zinc binding protein
chr4	107747399	107749152	+	107747399	107748662	A3SS&ES	0.5	50	50	ENSMUST00000132417.8	ENSMUSG00000028608.16	Czib	chr4	protein_coding	CXXC motif containing zinc binding protein
chr4	107748718	107749419	+	107748718	107749152	3pMXE	0.33	50	50	ENSMUST00000128474.2	ENSMUSG00000028608.16	Czib	chr4	protein_coding	CXXC motif containing zinc binding protein
chr4	107761760	107769838	-	107761760;107765422	107764118;107769838	ES	0.33	50	50	ENSMUST00000030345.15	ENSMUSG00000028607.17	Cpt2	chr4	protein_coding	carnitine palmitoyltransferase 2
chr4	107765422	107771461	-	107765422;107769944	107769838;107771461	ES	0.5	50	50	ENSMUST00000030345.15	ENSMUSG00000028607.17	Cpt2	chr4	protein_coding	carnitine palmitoyltransferase 2
chr4	107769944	107780512	-	107769944;107771541	107771461;107780512	ES	0.5	50	50	ENSMUST00000030345.15	ENSMUSG00000028607.17	Cpt2	chr4	protein_coding	carnitine palmitoyltransferase 2
chr4	107765284	107769838	-	107765422	107769838	A3SS	0.33	50	50	ENSMUST00000030345.15	ENSMUSG00000028607.17	Cpt2	chr4	protein_coding	carnitine palmitoyltransferase 2
chr4	107765284	107769838	-	107761760	107769838	A3SS	0.33	50	50	ENSMUST00000106720.9	ENSMUSG00000028607.17	Cpt2	chr4	protein_coding	carnitine palmitoyltransferase 2
chr4	107765422	107769838	-	107761760	107769838	A3SS	0.33	50	50	ENSMUST00000106720.9	ENSMUSG00000028607.17	Cpt2	chr4	protein_coding	carnitine palmitoyltransferase 2
chr4	107765422	107771461	-	107769944	107771461	A3SS&ES	0.5	50	50	ENSMUST00000106720.9	ENSMUSG00000028607.17	Cpt2	chr4	protein_coding	carnitine palmitoyltransferase 2
chr4	107761760	107764118	-	107761760	107769838	A5SS	0.5	50	50	ENSMUST00000106720.9	ENSMUSG00000028607.17	Cpt2	chr4	protein_coding	carnitine palmitoyltransferase 2
chr4	107765422	107771461	-	107765422	107769838	5pMXE	0.5	50	50	ENSMUST00000175651.2	ENSMUSG00000028607.17	Cpt2	chr4	protein_coding	carnitine palmitoyltransferase 2
chr4	107765422;107769944	107769838;107780512	-	107765422;107771541	107771461;107780512	MXE	0.5	100	100	ENSMUST00000141738.2	ENSMUSG00000028607.17	Cpt2	chr4	protein_coding	carnitine palmitoyltransferase 2
chr4	107887250	107889457	-	107887250	107889067	5pMXE	0.33	50	50	ENSMUST00000106709.9	ENSMUSG00000028600.16	Podn	chr4	protein_coding	podocan
chr4	107876061	107878351	-	107876139	107878351	A3SS	0.5	50	50	ENSMUST00000106709.9	ENSMUSG00000028600.16	Podn	chr4	protein_coding	podocan
chr4	107884492	107885831	-	107884492	107885805	A5SS	0.5	50	50	ENSMUST00000106709.9	ENSMUSG00000028600.16	Podn	chr4	protein_coding	podocan
chr4	107887250	107887885	-	107887250	107889067	A5SS	0.33	50	50	ENSMUST00000106709.9	ENSMUSG00000028600.16	Podn	chr4	protein_coding	podocan
chr4	107887250	107889457	-	107887250	107887885	5pMXE	0.33	50	50	ENSMUST00000147597.8	ENSMUSG00000028600.16	Podn	chr4	protein_coding	podocan
chr4	107904866	107921083	-	107904866;107912765	107912636;107921083	ES	0.5	50	50	ENSMUST00000030340.15	ENSMUSG00000028603.16	Scp2	chr4	protein_coding	sterol carrier protein 2, liver
chr4	107959552	107964814	-	107959552;107962372	107962241;107964814	ES	0.5	50	50	ENSMUST00000030340.15	ENSMUSG00000028603.16	Scp2	chr4	protein_coding	sterol carrier protein 2, liver
chr4	107969481	108001589	-	107969481	107975576	5pMXE	0.33	50	50	ENSMUST00000030340.15	ENSMUSG00000028603.16	Scp2	chr4	protein_coding	sterol carrier protein 2, liver
chr4	107969481	108001978	-	107969481	107975576	5pMXE	0.33	50	50	ENSMUST00000030340.15	ENSMUSG00000028603.16	Scp2	chr4	protein_coding	sterol carrier protein 2, liver
chr4	107959552	107964814	-	107962372	107964814	A3SS&ES	0.5	50	50	ENSMUST00000135379.8	ENSMUSG00000028603.16	Scp2	chr4	protein_coding	sterol carrier protein 2, liver
chr4	107969481	108001978	-	107969481;108001756	108001589;108001978	ES	0.5	50	50	ENSMUST00000143340.2	ENSMUSG00000028603.16	Scp2	chr4	protein_coding	sterol carrier protein 2, liver
chr4	108022858	108027058	+	108022858;108026979	108026912;108027058	ES	0.5	50	50	ENSMUST00000052999.13	ENSMUSG00000028601.19	Echdc2	chr4	protein_coding	enoyl Coenzyme A hydratase domain containing 2
chr4	108029372	108030992	+	108029372;108030169	108030077;108030992	ES	0.33	50	50	ENSMUST00000052999.13	ENSMUSG00000028601.19	Echdc2	chr4	protein_coding	enoyl Coenzyme A hydratase domain containing 2
chr4	108034320	108036104	+	108034320;108035615	108035568;108036104	ES	0.5	50	50	ENSMUST00000052999.13	ENSMUSG00000028601.19	Echdc2	chr4	protein_coding	enoyl Coenzyme A hydratase domain containing 2
chr4	108030169;108030743	108030722;108030992	+	108030169	108030992	cassetteExon	0.5	100	100	ENSMUST00000052999.13	ENSMUSG00000028601.19	Echdc2	chr4	protein_coding	enoyl Coenzyme A hydratase domain containing 2
chr4	108029372	108029936	+	108029372	108030077	A3SS	0.2	50	50	ENSMUST00000052999.13	ENSMUSG00000028601.19	Echdc2	chr4	protein_coding	enoyl Coenzyme A hydratase domain containing 2
chr4	108029372	108029948	+	108029372	108030077	A3SS	0.2	50	50	ENSMUST00000052999.13	ENSMUSG00000028601.19	Echdc2	chr4	protein_coding	enoyl Coenzyme A hydratase domain containing 2
chr4	108031371	108032456	+	108031371	108034270	A3SS	0.5	50	50	ENSMUST00000052999.13	ENSMUSG00000028601.19	Echdc2	chr4	protein_coding	enoyl Coenzyme A hydratase domain containing 2
chr4	108027423	108029286	+	108027145	108029286	A5SS	0.5	50	50	ENSMUST00000052999.13	ENSMUSG00000028601.19	Echdc2	chr4	protein_coding	enoyl Coenzyme A hydratase domain containing 2
chr4	108027145	108031184	+	108031048	108031184	A5SS&ES	0.33	50	50	ENSMUST00000130942.8	ENSMUSG00000028601.19	Echdc2	chr4	protein_coding	enoyl Coenzyme A hydratase domain containing 2
chr4	108029372	108031184	+	108029372;108031048	108030992;108031184	ES	0.33	50	50	ENSMUST00000116307.8	ENSMUSG00000028601.19	Echdc2	chr4	protein_coding	enoyl Coenzyme A hydratase domain containing 2
chr4	108029372;108030169	108029936;108030992	+	108029372	108030992	cassetteExon	0.5	100	100	ENSMUST00000116307.8	ENSMUSG00000028601.19	Echdc2	chr4	protein_coding	enoyl Coenzyme A hydratase domain containing 2
chr4	108029372;108030169	108029948;108030992	+	108029372	108030992	cassetteExon	0.5	100	100	ENSMUST00000116307.8	ENSMUSG00000028601.19	Echdc2	chr4	protein_coding	enoyl Coenzyme A hydratase domain containing 2
chr4	108030743	108030992	+	108029372	108030992	A5SS	0.33	50	50	ENSMUST00000116307.8	ENSMUSG00000028601.19	Echdc2	chr4	protein_coding	enoyl Coenzyme A hydratase domain containing 2
chr4	108022858	108027058	+	108026979	108027058	5pMXE	0.5	50	50	ENSMUST00000135718.8	ENSMUSG00000028601.19	Echdc2	chr4	protein_coding	enoyl Coenzyme A hydratase domain containing 2
chr4	108027145	108031184	+	108027145;108029372	108029286;108031184	ES	0.33	50	50	ENSMUST00000135718.8	ENSMUSG00000028601.19	Echdc2	chr4	protein_coding	enoyl Coenzyme A hydratase domain containing 2
chr4	108029372	108029936	+	108029372	108031184	A3SS	0.2	50	50	ENSMUST00000135718.8	ENSMUSG00000028601.19	Echdc2	chr4	protein_coding	enoyl Coenzyme A hydratase domain containing 2
chr4	108029372	108029948	+	108029372	108031184	A3SS	0.2	50	50	ENSMUST00000135718.8	ENSMUSG00000028601.19	Echdc2	chr4	protein_coding	enoyl Coenzyme A hydratase domain containing 2
chr4	108029372	108030077	+	108029372	108031184	A3SS	0.2	50	50	ENSMUST00000135718.8	ENSMUSG00000028601.19	Echdc2	chr4	protein_coding	enoyl Coenzyme A hydratase domain containing 2
chr4	108029372	108029948	+	108029372	108029936	A3SS	0.2	50	50	ENSMUST00000133049.9	ENSMUSG00000028601.19	Echdc2	chr4	protein_coding	enoyl Coenzyme A hydratase domain containing 2
chr4	108029372	108030992	+	108030169	108030992	5pMXE	0.33	50	50	ENSMUST00000150487.2	ENSMUSG00000028601.19	Echdc2	chr4	protein_coding	enoyl Coenzyme A hydratase domain containing 2
chr4	108029372	108031184	+	108031048	108031184	5pMXE	0.33	50	50	ENSMUST00000106691.3	ENSMUSG00000028601.19	Echdc2	chr4	protein_coding	enoyl Coenzyme A hydratase domain containing 2
chr4	108039318	108040845	-	108039110	108040845	A3SS	0.5	50	50	ENSMUST00000223127.2	ENSMUSG00000034645.15	Zyg11a	chr4	protein_coding	zyg-11 family member A, cell cycle regulator
chr4	108067418	108075036	-	108067418	108075030	A5SS	0.5	50	50	ENSMUST00000223127.2	ENSMUSG00000034645.15	Zyg11a	chr4	protein_coding	zyg-11 family member A, cell cycle regulator
chr4	108185487;108186415	108186385;108189408	+	108185487	108189408	cassetteExon	0.5	100	100	ENSMUST00000131656.2	ENSMUSG00000048351.15	Coa7	chr4	protein_coding	cytochrome c oxidase assembly factor 7
chr4	108189548	108189735	+	108189548	108195320	A3SS	0.5	50	50	ENSMUST00000131656.2	ENSMUSG00000048351.15	Coa7	chr4	protein_coding	cytochrome c oxidase assembly factor 7
chr4	108185417	108189408	+	108185487	108189408	A5SS	0.25	50	50	ENSMUST00000131656.2	ENSMUSG00000048351.15	Coa7	chr4	protein_coding	cytochrome c oxidase assembly factor 7
chr4	108185444	108189408	+	108185487	108189408	A5SS	0.25	50	50	ENSMUST00000131656.2	ENSMUSG00000048351.15	Coa7	chr4	protein_coding	cytochrome c oxidase assembly factor 7
chr4	108185417	108189408	+	108185444	108189408	A5SS	0.25	50	50	ENSMUST00000134394.8	ENSMUSG00000048351.15	Coa7	chr4	protein_coding	cytochrome c oxidase assembly factor 7
chr4	108186415	108189408	+	108185444	108189408	A5SS	0.25	50	50	ENSMUST00000134394.8	ENSMUSG00000048351.15	Coa7	chr4	protein_coding	cytochrome c oxidase assembly factor 7
chr4	108186415	108189408	+	108185417	108189408	A5SS	0.25	50	50	ENSMUST00000073764.13	ENSMUSG00000048351.15	Coa7	chr4	protein_coding	cytochrome c oxidase assembly factor 7
chr4	108258194	108263740	-	108258194;108260659	108260398;108263740	ES	0.5	50	50	ENSMUST00000030332.7	ENSMUSG00000028597.12	Gpx7	chr4	protein_coding	glutathione peroxidase 7
chr4	108380504	108381268	+	108380504	108383965	A3SS	0.5	50	50	ENSMUST00000043368.12	ENSMUSG00000034610.15	Tut4	chr4	protein_coding	terminal uridylyl transferase 4
chr4	108405367	108406423	+	108405367	108406438	A3SS	0.5	50	50	ENSMUST00000043368.12	ENSMUSG00000034610.15	Tut4	chr4	protein_coding	terminal uridylyl transferase 4
chr4	108414671	108415915	+	108414671	108415912	A3SS	0.5	50	50	ENSMUST00000043368.12	ENSMUSG00000034610.15	Tut4	chr4	protein_coding	terminal uridylyl transferase 4
chr4	108436772;108445978	108445873;108450490	+	108436772	108450490	cassetteExon	0.5	100	100	ENSMUST00000139772.8	ENSMUSG00000028587.19	Orc1	chr4	protein_coding	origin recognition complex, subunit 1
chr4	108447974	108450490	+	108436772	108450490	A5SS	0.33	50	50	ENSMUST00000139772.8	ENSMUSG00000028587.19	Orc1	chr4	protein_coding	origin recognition complex, subunit 1
chr4	108445978;108447974	108447850;108450490	+	108445978	108450490	cassetteExon	0.5	100	100	ENSMUST00000130162.2	ENSMUSG00000028587.19	Orc1	chr4	protein_coding	origin recognition complex, subunit 1
chr4	108445286	108445873	+	108436772	108445873	A5SS	0.5	50	50	ENSMUST00000130162.2	ENSMUSG00000028587.19	Orc1	chr4	protein_coding	origin recognition complex, subunit 1
chr4	108482201	108482531	+	108482201	108482605	A3SS	0.5	50	50	ENSMUST00000030320.13	ENSMUSG00000028582.15	Cc2d1b	chr4	protein_coding	coiled-coil and C2 domain containing 1B
chr4	108483011	108483235	+	108483011	108483178	A3SS	0.5	50	50	ENSMUST00000030320.13	ENSMUSG00000028582.15	Cc2d1b	chr4	protein_coding	coiled-coil and C2 domain containing 1B
chr4	108553065	108581004	-	108553065;108577009	108574986;108581004	ES	0.5	50	50	ENSMUST00000106658.8	ENSMUSG00000034557.15	Zfyve9	chr4	protein_coding	zinc finger, FYVE domain containing 9
chr4	108548988;108550693	108550517;108552966	-	108548988	108552966	cassetteExon	0.5	100	100	ENSMUST00000106658.8	ENSMUSG00000034557.15	Zfyve9	chr4	protein_coding	zinc finger, FYVE domain containing 9
chr4	108577009	108581004	-	108553065	108581004	A3SS	0.5	50	50	ENSMUST00000042185.8	ENSMUSG00000034557.15	Zfyve9	chr4	protein_coding	zinc finger, FYVE domain containing 9
chr4	108553065	108574986	-	108553065	108581004	A5SS	0.5	50	50	ENSMUST00000042185.8	ENSMUSG00000034557.15	Zfyve9	chr4	protein_coding	zinc finger, FYVE domain containing 9
chr4	108687780;108689648	108689610;108690705	-	108687780	108690705	cassetteExon	0.5	100	100	ENSMUST00000102742.11	ENSMUSG00000028568.17	Btf3l4	chr4	protein_coding	basic transcription factor 3-like 4
chr4	108687780	108688903	-	108687780	108690705	A5SS	0.25	50	50	ENSMUST00000102742.11	ENSMUSG00000028568.17	Btf3l4	chr4	protein_coding	basic transcription factor 3-like 4
chr4	108687780	108690340	-	108687780	108690705	A5SS	0.25	50	50	ENSMUST00000102742.11	ENSMUSG00000028568.17	Btf3l4	chr4	protein_coding	basic transcription factor 3-like 4
chr4	108687780	108688903	-	108687780	108690340	A5SS	0.25	50	50	ENSMUST00000102741.8	ENSMUSG00000028568.17	Btf3l4	chr4	protein_coding	basic transcription factor 3-like 4
chr4	108687780	108689610	-	108687780	108690340	A5SS	0.25	50	50	ENSMUST00000102741.8	ENSMUSG00000028568.17	Btf3l4	chr4	protein_coding	basic transcription factor 3-like 4
chr4	108687780	108688903	-	108687780	108689610	A5SS	0.25	50	50	ENSMUST00000102740.8	ENSMUSG00000028568.17	Btf3l4	chr4	protein_coding	basic transcription factor 3-like 4
chr4	108786750	108797823	+	108786723	108797823	A5SS	0.33	50	50	ENSMUST00000106650.9	ENSMUSG00000003411.11	Rab3b	chr4	protein_coding	RAB3B, member RAS oncogene family
chr4	108796448	108797823	+	108786723	108797823	A5SS	0.33	50	50	ENSMUST00000106650.9	ENSMUSG00000003411.11	Rab3b	chr4	protein_coding	RAB3B, member RAS oncogene family
chr4	108796448	108797823	+	108786750	108797823	A5SS	0.33	50	50	ENSMUST00000106651.9	ENSMUSG00000003411.11	Rab3b	chr4	protein_coding	RAB3B, member RAS oncogene family
chr4	108903878	108906264	+	108903878;108904913	108904794;108906264	ES	0.5	50	50	ENSMUST00000065977.11	ENSMUSG00000053510.13	Nrd1	chr4	protein_coding	nardilysin, N-arginine dibasic convertase, NRD convertase 1
chr4	108915831	108916969	+	108915831;108916265	108916182;108916969	ES	0.5	50	50	ENSMUST00000065977.11	ENSMUSG00000053510.13	Nrd1	chr4	protein_coding	nardilysin, N-arginine dibasic convertase, NRD convertase 1
chr4	108871037	108873849	+	108871037	108875036	A3SS	0.5	50	50	ENSMUST00000065977.11	ENSMUSG00000053510.13	Nrd1	chr4	protein_coding	nardilysin, N-arginine dibasic convertase, NRD convertase 1
chr4	108874893	108875036	+	108871037	108875036	A5SS	0.5	50	50	ENSMUST00000065977.11	ENSMUSG00000053510.13	Nrd1	chr4	protein_coding	nardilysin, N-arginine dibasic convertase, NRD convertase 1
chr4	108903548	108903792	+	108901868	108903792	A5SS	0.5	50	50	ENSMUST00000065977.11	ENSMUSG00000053510.13	Nrd1	chr4	protein_coding	nardilysin, N-arginine dibasic convertase, NRD convertase 1
chr4	108886070	108889647	+	108886070	108891878	A3SS	0.5	50	50	ENSMUST00000102736.9	ENSMUSG00000053510.13	Nrd1	chr4	protein_coding	nardilysin, N-arginine dibasic convertase, NRD convertase 1
chr4	108890560	108891878	+	108886070	108891878	A5SS	0.5	50	50	ENSMUST00000102736.9	ENSMUSG00000053510.13	Nrd1	chr4	protein_coding	nardilysin, N-arginine dibasic convertase, NRD convertase 1
chr4	108915831	108916969	+	108916265	108916969	5pMXE	0.5	50	50	ENSMUST00000150796.2	ENSMUSG00000053510.13	Nrd1	chr4	protein_coding	nardilysin, N-arginine dibasic convertase, NRD convertase 1
chr4	108944682	108955700	-	108944682;108948896	108948858;108955700	ES	0.33	50	50	ENSMUST00000084366.13	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	108959789	108990941	-	108959789	108975092	5pMXE	0.2	50	50	ENSMUST00000084366.13	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	108959789	108965078	-	108959789	108975092	A5SS	0.2	50	50	ENSMUST00000084366.13	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	108959789	108966886	-	108959789	108975092	A5SS	0.2	50	50	ENSMUST00000084366.13	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	108959789	108974821	-	108959789	108975092	A5SS	0.2	50	50	ENSMUST00000084366.13	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	108959789	108990941	-	108959789;108965146	108965078;108990941	ES	0.5	50	50	ENSMUST00000194478.6	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	108991017	109029471	-	108991017;109013930	109013852;109029471	ES	0.33	50	50	ENSMUST00000194478.6	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	109013930	109059302	-	109013930;109029521	109029471;109059302	ES	0.5	50	50	ENSMUST00000194478.6	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	109013930;109019728	109019487;109029471	-	109013930	109029471	cassetteExon	0.5	100	100	ENSMUST00000194478.6	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	108959789	108966886	-	108959789	108965078	A5SS&ES	0.2	50	50	ENSMUST00000194478.6	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	108959789	108974821	-	108959789	108965078	A5SS&ES	0.2	50	50	ENSMUST00000194478.6	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	108991017	109013554	-	108991017	109013852	A5SS	0.33	50	50	ENSMUST00000194478.6	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	109013930	109014065	-	109013930	109029471	A5SS	0.25	50	50	ENSMUST00000194478.6	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	108991017;109029521	109029471;109059302	-	108991017;109013930	109013852;109059302	MXE	0.5	100	100	ENSMUST00000160774.8	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	108959789	108966886	-	108959789	108990941	A5SS	0.2	50	50	ENSMUST00000160774.8	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	108959789	108974821	-	108959789	108990941	A5SS	0.2	50	50	ENSMUST00000160774.8	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	109013930	109014065	-	109013930	109059302	A5SS	0.25	50	50	ENSMUST00000160774.8	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	109013930	109019487	-	109013930	109059302	A5SS	0.25	50	50	ENSMUST00000160774.8	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	108991017;109013930	109013554;109029471	-	108991017	109029471	cassetteExon	0.5	100	100	ENSMUST00000159545.8	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	108991017;109013930	109013554;109059302	-	108991017;109029521	109029471;109059302	MXE	0.5	100	100	ENSMUST00000159545.8	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	109019728	109029471	-	108991017	109029471	A3SS	0.33	50	50	ENSMUST00000159545.8	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	108991017	109029471	-	108991017	109013554	5pMXE	0.33	50	50	ENSMUST00000161363.2	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	108944682	108955700	-	108930346	108955700	A3SS	0.33	50	50	ENSMUST00000126288.8	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	108948896	108955700	-	108930346	108955700	A3SS	0.33	50	50	ENSMUST00000126288.8	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	108930346	108940286	-	108930346	108955700	A5SS	0.5	50	50	ENSMUST00000126288.8	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	108959789	108966886	-	108959789	108974821	A5SS	0.2	50	50	ENSMUST00000126288.8	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	108991017	109029471	-	108991017	109013852	5pMXE	0.33	50	50	ENSMUST00000161602.8	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	108959789	108990941	-	108959789	108965078	5pMXE	0.2	50	50	ENSMUST00000153714.8	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	109013930	109019487	-	109013930	109014065	5pMXE	0.25	50	50	ENSMUST00000139248.8	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	109013930	109059302	-	109029521	109059302	3pMXE	0.5	50	50	ENSMUST00000159758.2	ENSMUSG00000028559.18	Osbpl9	chr4	protein_coding	oxysterol binding protein-like 9
chr4	109092819	109092971	+	109091800	109092971	A5SS	0.33	50	50	ENSMUST00000106629.8	ENSMUSG00000028558.15	Calr4	chr4	protein_coding	calreticulin 4
chr4	109092829	109092971	+	109091800	109092971	A5SS	0.33	50	50	ENSMUST00000106629.8	ENSMUSG00000028558.15	Calr4	chr4	protein_coding	calreticulin 4
chr4	109092819	109092971	+	109092829	109092971	A5SS	0.33	50	50	ENSMUST00000106631.9	ENSMUSG00000028558.15	Calr4	chr4	protein_coding	calreticulin 4
chr4	109162921	109169501	+	109162921;109166417	109166322;109169501	ES	0.5	50	50	ENSMUST00000102729.10	ENSMUSG00000028552.14	Eps15	chr4	protein_coding	epidermal growth factor receptor pathway substrate 15
chr4	109235538	109239982	+	109235538;109237226	109237064;109239982	ES	0.5	50	50	ENSMUST00000102729.10	ENSMUSG00000028552.14	Eps15	chr4	protein_coding	epidermal growth factor receptor pathway substrate 15
chr4	109237226	109242516	+	109237226;109240163	109239982;109242516	ES	0.5	50	50	ENSMUST00000102729.10	ENSMUSG00000028552.14	Eps15	chr4	protein_coding	epidermal growth factor receptor pathway substrate 15
chr4	109237226	109240044	+	109237226	109239982	A3SS	0.33	50	50	ENSMUST00000102729.10	ENSMUSG00000028552.14	Eps15	chr4	protein_coding	epidermal growth factor receptor pathway substrate 15
chr4	109178522	109179267	+	109178414	109179267	A5SS	0.5	50	50	ENSMUST00000102729.10	ENSMUSG00000028552.14	Eps15	chr4	protein_coding	epidermal growth factor receptor pathway substrate 15
chr4	109237226	109242516	+	109237226;109240163	109240044;109242516	ES	0.5	50	50	ENSMUST00000176251.8	ENSMUSG00000028552.14	Eps15	chr4	protein_coding	epidermal growth factor receptor pathway substrate 15
chr4	109235538	109239982	+	109235538	109237064	A3SS&ES	0.5	50	50	ENSMUST00000176251.8	ENSMUSG00000028552.14	Eps15	chr4	protein_coding	epidermal growth factor receptor pathway substrate 15
chr4	109218521	109218867	+	109218521	109223321	A3SS	0.5	50	50	ENSMUST00000132165.9	ENSMUSG00000028552.14	Eps15	chr4	protein_coding	epidermal growth factor receptor pathway substrate 15
chr4	109220576	109223321	+	109218521	109223321	A5SS	0.5	50	50	ENSMUST00000132165.9	ENSMUSG00000028552.14	Eps15	chr4	protein_coding	epidermal growth factor receptor pathway substrate 15
chr4	109162921	109169501	+	109166417	109169501	5pMXE	0.5	50	50	ENSMUST00000141751.2	ENSMUSG00000028552.14	Eps15	chr4	protein_coding	epidermal growth factor receptor pathway substrate 15
chr4	109235538;109240163	109239982;109242516	+	109235538;109237226	109237064;109242516	MXE	0.5	100	100	ENSMUST00000177192.2	ENSMUSG00000028552.14	Eps15	chr4	protein_coding	epidermal growth factor receptor pathway substrate 15
chr4	109264406	109273184	+	109264040	109273184	A5SS	0.25	50	50	ENSMUST00000124209.8	ENSMUSG00000028555.16	Ttc39a	chr4	protein_coding	tetratricopeptide repeat domain 39A
chr4	109272066	109273184	+	109264040	109273184	A5SS	0.25	50	50	ENSMUST00000124209.8	ENSMUSG00000028555.16	Ttc39a	chr4	protein_coding	tetratricopeptide repeat domain 39A
chr4	109272944	109273184	+	109264040	109273184	A5SS	0.25	50	50	ENSMUST00000124209.8	ENSMUSG00000028555.16	Ttc39a	chr4	protein_coding	tetratricopeptide repeat domain 39A
chr4	109278410	109278490	+	109273288	109278490	A5SS	0.5	50	50	ENSMUST00000124209.8	ENSMUSG00000028555.16	Ttc39a	chr4	protein_coding	tetratricopeptide repeat domain 39A
chr4	109272066	109273184	+	109264406	109273184	A5SS	0.25	50	50	ENSMUST00000064129.14	ENSMUSG00000028555.16	Ttc39a	chr4	protein_coding	tetratricopeptide repeat domain 39A
chr4	109272944	109273184	+	109264406	109273184	A5SS	0.25	50	50	ENSMUST00000064129.14	ENSMUSG00000028555.16	Ttc39a	chr4	protein_coding	tetratricopeptide repeat domain 39A
chr4	109272944	109273184	+	109272066	109273184	A5SS	0.25	50	50	ENSMUST00000153315.8	ENSMUSG00000028555.16	Ttc39a	chr4	protein_coding	tetratricopeptide repeat domain 39A
chr4	109385239	109388293	-	109385239	109388409	A5SS	0.5	50	50	ENSMUST00000102725.11	ENSMUSG00000060491.15	4930522H14Rik	chr4	protein_coding	RIKEN cDNA 4930522H14 gene
chr4	109511308	109514622	-	109511308	109513598	A5SS	0.5	50	50	ENSMUST00000156790.8	ENSMUSG00000059027.15	9630013D21Rik	chr4	lncRNA	RIKEN cDNA 9630013D21 gene
chr4	109510022	109510136	-	109509843	109510136	A3SS	0.5	50	50	ENSMUST00000131216.8	ENSMUSG00000059027.15	9630013D21Rik	chr4	lncRNA	RIKEN cDNA 9630013D21 gene
chr4	109534269	109540442	+	109534269	109567987	A3SS	0.5	50	50	ENSMUST00000102724.5	ENSMUSG00000010517.8	Faf1	chr4	protein_coding	Fas-associated factor 1
chr4	110063856	110068623	-	110063856;110066975	110066937;110068623	ES	0.5	50	50	ENSMUST00000106598.8	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110108718	110147358	-	110108718	110144430	5pMXE	0.12	50	50	ENSMUST00000106598.8	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110108718	110147831	-	110108718	110144430	5pMXE	0.12	50	50	ENSMUST00000106598.8	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110108718	110149832	-	110108718	110144430	5pMXE	0.12	50	50	ENSMUST00000106598.8	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110108718	110208994	-	110108718	110144430	5pMXE	0.12	50	50	ENSMUST00000106598.8	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110108718;110112702	110112616;110144430	-	110108718	110144430	cassetteExon	0.5	100	100	ENSMUST00000106598.8	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110063898	110066937	-	110063856	110066937	A3SS	0.5	50	50	ENSMUST00000106598.8	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110082870	110083742	-	110070478	110083742	A3SS	0.5	50	50	ENSMUST00000106598.8	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110070478	110080197	-	110070478	110083742	A5SS	0.5	50	50	ENSMUST00000106598.8	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110108718	110131335	-	110108718	110144430	A5SS	0.12	50	50	ENSMUST00000106598.8	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110108718	110143667	-	110108718	110144430	A5SS	0.12	50	50	ENSMUST00000106598.8	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110108718	110147358	-	110108718	110143667	5pMXE	0.12	50	50	ENSMUST00000106597.10	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110108718	110147831	-	110108718	110143667	5pMXE	0.12	50	50	ENSMUST00000106597.10	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110108718	110149832	-	110108718	110143667	5pMXE	0.12	50	50	ENSMUST00000106597.10	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110108718	110208994	-	110108718	110143667	5pMXE	0.12	50	50	ENSMUST00000106597.10	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110108718;110112702	110112616;110143667	-	110108718	110143667	cassetteExon	0.5	100	100	ENSMUST00000106597.10	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110063856	110068623	-	110066975	110068623	A3SS&ES	0.5	50	50	ENSMUST00000106597.10	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110108718	110131335	-	110108718	110143667	A5SS	0.12	50	50	ENSMUST00000106597.10	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110108718	110147831	-	110108718	110147358	5pMXE	0.12	50	50	ENSMUST00000106600.9	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110108718	110149832	-	110108718	110147358	5pMXE	0.12	50	50	ENSMUST00000106600.9	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110108718	110208994	-	110108718	110147358	5pMXE	0.12	50	50	ENSMUST00000106600.9	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110108718	110112616	-	110108718	110147358	A5SS	0.12	50	50	ENSMUST00000106600.9	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110108718	110131335	-	110108718	110147358	A5SS	0.12	50	50	ENSMUST00000106600.9	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110108718	110208994	-	110108718	110149832	5pMXE	0.12	50	50	ENSMUST00000106601.8	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110108718	110112616	-	110108718	110149832	A5SS	0.12	50	50	ENSMUST00000106601.8	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110108718	110131335	-	110108718	110149832	A5SS	0.12	50	50	ENSMUST00000106601.8	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110108718	110147831	-	110108718	110149832	A5SS	0.12	50	50	ENSMUST00000106601.8	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110108718	110112616	-	110108718	110208994	A5SS	0.12	50	50	ENSMUST00000106603.9	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110108718	110131335	-	110108718	110208994	A5SS	0.12	50	50	ENSMUST00000106603.9	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110108718	110147831	-	110108718	110208994	A5SS	0.12	50	50	ENSMUST00000106603.9	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110112702	110144430	-	110112702	110143667	5pMXE	0.5	50	50	ENSMUST00000138972.8	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110108718	110131335	-	110108718	110112616	A5SS&ES	0.33	50	50	ENSMUST00000138972.8	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110108718	110147831	-	110108718	110131335	5pMXE	0.12	50	50	ENSMUST00000144554.2	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110108718	110143667	-	110108718	110112616	A5SS&ES	0.25	50	50	ENSMUST00000153906.2	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110108718	110112616	-	110108718	110147831	A5SS	0.12	50	50	ENSMUST00000142722.2	ENSMUSG00000028546.18	Elavl4	chr4	protein_coding	ELAV like RNA binding protein 4
chr4	110255102;110335784	110335662;110437248	+	110255102	110437248	cassetteExon	0.5	100	100	ENSMUST00000106589.9	ENSMUSG00000061298.15	Agbl4	chr4	protein_coding	ATP/GTP binding protein-like 4
chr4	110437372	110517993	+	110437372	110812764	A3SS	0.5	50	50	ENSMUST00000106589.9	ENSMUSG00000061298.15	Agbl4	chr4	protein_coding	ATP/GTP binding protein-like 4
chr4	110976238	111115517	+	110976238	111188437	A3SS	0.5	50	50	ENSMUST00000106591.8	ENSMUSG00000061298.15	Agbl4	chr4	protein_coding	ATP/GTP binding protein-like 4
chr4	111513619	111514289	+	111513619	111520101	A3SS	0.33	50	50	ENSMUST00000106592.8	ENSMUSG00000061298.15	Agbl4	chr4	protein_coding	ATP/GTP binding protein-like 4
chr4	111513619	111514355	+	111513619	111520101	A3SS	0.33	50	50	ENSMUST00000106592.8	ENSMUSG00000061298.15	Agbl4	chr4	protein_coding	ATP/GTP binding protein-like 4
chr4	111513619	111514289	+	111513619	111514355	A3SS	0.33	50	50	ENSMUST00000097920.9	ENSMUSG00000061298.15	Agbl4	chr4	protein_coding	ATP/GTP binding protein-like 4
chr4	111290750	111311282	+	111290750;111305851	111305703;111311282	ES	0.5	50	50	ENSMUST00000030274.7	ENSMUSG00000028545.14	Bend5	chr4	protein_coding	BEN domain containing 5
chr4	111272597	111275520	+	111272597	111288214	A3SS	0.33	50	50	ENSMUST00000030274.7	ENSMUSG00000028545.14	Bend5	chr4	protein_coding	BEN domain containing 5
chr4	111272597	111290284	+	111272597	111288214	A3SS&ES	0.33	50	50	ENSMUST00000030274.7	ENSMUSG00000028545.14	Bend5	chr4	protein_coding	BEN domain containing 5
chr4	111288347	111290284	+	111288347	111290366	A3SS	0.5	50	50	ENSMUST00000030274.7	ENSMUSG00000028545.14	Bend5	chr4	protein_coding	BEN domain containing 5
chr4	111272597;111288347	111288214;111290284	+	111272597	111290284	cassetteExon	0.5	100	100	ENSMUST00000130523.2	ENSMUSG00000028545.14	Bend5	chr4	protein_coding	BEN domain containing 5
chr4	111272597	111275520	+	111272597	111290284	A3SS	0.33	50	50	ENSMUST00000130523.2	ENSMUSG00000028545.14	Bend5	chr4	protein_coding	BEN domain containing 5
chr4	111290750;111311495	111311282;111316947	+	111290750	111316947	cassetteExon	0.5	100	100	ENSMUST00000139876.2	ENSMUSG00000028545.14	Bend5	chr4	protein_coding	BEN domain containing 5
chr4	111290750	111305703	+	111290750	111316947	A3SS	0.33	50	50	ENSMUST00000139876.2	ENSMUSG00000028545.14	Bend5	chr4	protein_coding	BEN domain containing 5
chr4	111603475	111624860	+	111603475;111605000	111604952;111624860	ES	0.33	50	50	ENSMUST00000038868.14	ENSMUSG00000034401.17	Spata6	chr4	protein_coding	spermatogenesis associated 6
chr4	111605000	111625913	+	111605000;111624901	111624860;111625913	ES	0.5	50	50	ENSMUST00000038868.14	ENSMUSG00000034401.17	Spata6	chr4	protein_coding	spermatogenesis associated 6
chr4	111656451	111679938	+	111656451;111663227	111663128;111679938	ES	0.33	50	50	ENSMUST00000038868.14	ENSMUSG00000034401.17	Spata6	chr4	protein_coding	spermatogenesis associated 6
chr4	111632076;111634862	111634700;111636197	+	111632076	111636197	cassetteExon	0.5	100	100	ENSMUST00000038868.14	ENSMUSG00000034401.17	Spata6	chr4	protein_coding	spermatogenesis associated 6
chr4	111605000	111625897	+	111605000	111624860	A3SS&ES	0.33	50	50	ENSMUST00000038868.14	ENSMUSG00000034401.17	Spata6	chr4	protein_coding	spermatogenesis associated 6
chr4	111624901	111625897	+	111624901	111625913	A3SS	0.5	50	50	ENSMUST00000038868.14	ENSMUSG00000034401.17	Spata6	chr4	protein_coding	spermatogenesis associated 6
chr4	111636490	111637041	+	111636490	111637952	A3SS	0.5	50	50	ENSMUST00000038868.14	ENSMUSG00000034401.17	Spata6	chr4	protein_coding	spermatogenesis associated 6
chr4	111663179	111679938	+	111663227	111679938	A5SS	0.33	50	50	ENSMUST00000038868.14	ENSMUSG00000034401.17	Spata6	chr4	protein_coding	spermatogenesis associated 6
chr4	111577454;111624901	111624860;111625913	+	111577454;111605000	111603338;111625913	MXE	0.5	100	100	ENSMUST00000070513.13	ENSMUSG00000034401.17	Spata6	chr4	protein_coding	spermatogenesis associated 6
chr4	111603475;111624901	111624860;111625913	+	111603475;111605000	111604952;111625913	MXE	0.5	100	100	ENSMUST00000070513.13	ENSMUSG00000034401.17	Spata6	chr4	protein_coding	spermatogenesis associated 6
chr4	111605000	111625897	+	111605000	111625913	A3SS	0.33	50	50	ENSMUST00000070513.13	ENSMUSG00000034401.17	Spata6	chr4	protein_coding	spermatogenesis associated 6
chr4	111656451	111679938	+	111656451	111663128	3pMXE	0.5	50	50	ENSMUST00000122820.8	ENSMUSG00000034401.17	Spata6	chr4	protein_coding	spermatogenesis associated 6
chr4	111632076	111636197	+	111632076	111634700	3pMXE	0.5	50	50	ENSMUST00000153746.8	ENSMUSG00000034401.17	Spata6	chr4	protein_coding	spermatogenesis associated 6
chr4	111605000	111625897	+	111605000;111624901	111624860;111625897	ES	0.5	50	50	ENSMUST00000140366.8	ENSMUSG00000034401.17	Spata6	chr4	protein_coding	spermatogenesis associated 6
chr4	111605000	111625913	+	111605000	111624860	A3SS&ES	0.33	50	50	ENSMUST00000140366.8	ENSMUSG00000034401.17	Spata6	chr4	protein_coding	spermatogenesis associated 6
chr4	111577454;111603475	111603338;111624860	+	111577454	111624860	cassetteExon	0.5	100	100	ENSMUST00000156179.8	ENSMUSG00000034401.17	Spata6	chr4	protein_coding	spermatogenesis associated 6
chr4	111605000	111624860	+	111577454	111624860	A5SS	0.33	50	50	ENSMUST00000156179.8	ENSMUSG00000034401.17	Spata6	chr4	protein_coding	spermatogenesis associated 6
chr4	111605000	111625913	+	111624901	111625913	A5SS&ES	0.5	50	50	ENSMUST00000156179.8	ENSMUSG00000034401.17	Spata6	chr4	protein_coding	spermatogenesis associated 6
chr4	111577454;111624901	111624860;111625897	+	111577454;111605000	111603338;111625897	MXE	0.5	100	100	ENSMUST00000123718.8	ENSMUSG00000034401.17	Spata6	chr4	protein_coding	spermatogenesis associated 6
chr4	111603475;111624901	111624860;111625897	+	111603475;111605000	111604952;111625897	MXE	0.5	100	100	ENSMUST00000123718.8	ENSMUSG00000034401.17	Spata6	chr4	protein_coding	spermatogenesis associated 6
chr4	111656451	111679938	+	111656451;111663179	111663128;111679938	ES	0.33	50	50	ENSMUST00000084354.4	ENSMUSG00000034401.17	Spata6	chr4	protein_coding	spermatogenesis associated 6
chr4	111632076	111636197	+	111634862	111636197	5pMXE	0.5	50	50	ENSMUST00000143879.8	ENSMUSG00000034401.17	Spata6	chr4	protein_coding	spermatogenesis associated 6
chr4	111656451	111679938	+	111663227	111679938	5pMXE	0.33	50	50	ENSMUST00000137072.2	ENSMUSG00000034401.17	Spata6	chr4	protein_coding	spermatogenesis associated 6
chr4	111750529	111753478	-	111750529;111750882	111750778;111753478	ES	0.5	50	50	ENSMUST00000102721.8	ENSMUSG00000028544.15	Slc5a9	chr4	protein_coding	solute carrier family 5 (sodium/glucose cotransporter), member 9
chr4	111741195	111741356	-	111741195	111742642	A5SS	0.5	50	50	ENSMUST00000102721.8	ENSMUSG00000028544.15	Slc5a9	chr4	protein_coding	solute carrier family 5 (sodium/glucose cotransporter), member 9
chr4	111755955	111759901	-	111755955	111759912	A5SS	0.5	50	50	ENSMUST00000102721.8	ENSMUSG00000028544.15	Slc5a9	chr4	protein_coding	solute carrier family 5 (sodium/glucose cotransporter), member 9
chr4	111776779	111784364	+	111776779	111784361	A3SS	0.33	50	50	ENSMUST00000147395.2	ENSMUSG00000078599.10	Skint8	chr4	protein_coding	selection and upkeep of intraepithelial T cells 8
chr4	111776779	111784374	+	111776779	111784361	A3SS	0.33	50	50	ENSMUST00000147395.2	ENSMUSG00000078599.10	Skint8	chr4	protein_coding	selection and upkeep of intraepithelial T cells 8
chr4	111776779	111784364	+	111776779	111784374	A3SS	0.33	50	50	ENSMUST00000106572.8	ENSMUSG00000078599.10	Skint8	chr4	protein_coding	selection and upkeep of intraepithelial T cells 8
chr4	111842070	111842172	+	111842070	111845127	A3SS	0.5	50	50	ENSMUST00000163281.2	ENSMUSG00000049214.14	Skint7	chr4	protein_coding	selection and upkeep of intraepithelial T cells 7
chr4	111878775	111882664	+	111878775	111882749	A3SS	0.5	50	50	ENSMUST00000117379.9	ENSMUSG00000089773.8	Skint1	chr4	protein_coding	selection and upkeep of intraepithelial T cells 1
chr4	111938915	111944185	+	111930134	111944185	A5SS	0.5	50	50	ENSMUST00000106565.8	ENSMUSG00000055960.13	Skint4	chr4	protein_coding	selection and upkeep of intraepithelial T cells 4
chr4	112113097	112116078	+	112113097	112134751	A3SS	0.5	50	50	ENSMUST00000038455.12	ENSMUSG00000070868.12	Skint3	chr4	protein_coding	selection and upkeep of intraepithelial T cells 3
chr4	112127268	112134751	+	112113097	112134751	A5SS	0.5	50	50	ENSMUST00000038455.12	ENSMUSG00000070868.12	Skint3	chr4	protein_coding	selection and upkeep of intraepithelial T cells 3
chr4	112502704	112506892	+	112502704	112504292	3pMXE	0.5	50	50	ENSMUST00000106560.10	ENSMUSG00000034359.17	Skint2	chr4	protein_coding	selection and upkeep of intraepithelial T cells 2
chr4	112483293	112483678	+	112483293	112496793	A3SS	0.5	50	50	ENSMUST00000106560.10	ENSMUSG00000034359.17	Skint2	chr4	protein_coding	selection and upkeep of intraepithelial T cells 2
chr4	112470962	112473715	+	112414404	112473715	A5SS	0.5	50	50	ENSMUST00000106560.10	ENSMUSG00000034359.17	Skint2	chr4	protein_coding	selection and upkeep of intraepithelial T cells 2
chr4	112630361	112631952	-	112622314	112631952	A3SS	0.33	50	50	ENSMUST00000060327.4	ENSMUSG00000048766.7	Skint10	chr4	protein_coding	selection and upkeep of intraepithelial T cells 10
chr4	112630363	112631952	-	112622314	112631952	A3SS	0.33	50	50	ENSMUST00000060327.4	ENSMUSG00000048766.7	Skint10	chr4	protein_coding	selection and upkeep of intraepithelial T cells 10
chr4	112630363	112631952	-	112630361	112631952	A3SS	0.5	50	50	ENSMUST00000068851.6	ENSMUSG00000048766.7	Skint10	chr4	protein_coding	selection and upkeep of intraepithelial T cells 10
chr4	113374351	113392895	-	113374351;113381355	113381293;113392895	ES	0.5	50	50	ENSMUST00000169631.8	ENSMUSG00000078598.12	Skint5	chr4	protein_coding	selection and upkeep of intraepithelial T cells 5
chr4	114086069;114088961	114088839;114101743	+	114086069	114101743	cassetteExon	0.5	100	100	ENSMUST00000079915.10	ENSMUSG00000057977.11	Skint11	chr4	protein_coding	selection and upkeep of intraepithelial T cells 11
chr4	114020731	114051730	+	114020731	114048672	A3SS&ES	0.5	50	50	ENSMUST00000079915.10	ENSMUSG00000057977.11	Skint11	chr4	protein_coding	selection and upkeep of intraepithelial T cells 11
chr4	114048752	114051730	+	114048752	114085965	A3SS	0.5	50	50	ENSMUST00000079915.10	ENSMUSG00000057977.11	Skint11	chr4	protein_coding	selection and upkeep of intraepithelial T cells 11
chr4	114085018	114085965	+	114048752	114085965	A5SS	0.5	50	50	ENSMUST00000079915.10	ENSMUSG00000057977.11	Skint11	chr4	protein_coding	selection and upkeep of intraepithelial T cells 11
chr4	114020731	114051730	+	114020731;114048752	114048672;114051730	ES	0.5	50	50	ENSMUST00000164297.8	ENSMUSG00000057977.11	Skint11	chr4	protein_coding	selection and upkeep of intraepithelial T cells 11
chr4	114020731;114048752	114048672;114085965	+	114020731;114085018	114051730;114085965	MXE	0.5	100	100	ENSMUST00000151810.2	ENSMUSG00000057977.11	Skint11	chr4	protein_coding	selection and upkeep of intraepithelial T cells 11
chr4	114766855	114773386	+	114766855;114771071	114769367;114773386	ES	0.5	50	50	ENSMUST00000123272.2	ENSMUSG00000085399.8	Foxd2os	chr4	lncRNA	forkhead box D2, opposite strand
chr4	114766855	114769367	+	114766855	114773386	A3SS	0.5	50	50	ENSMUST00000144002.8	ENSMUSG00000085399.8	Foxd2os	chr4	lncRNA	forkhead box D2, opposite strand
chr4	114771071	114773386	+	114766855	114773386	A5SS	0.5	50	50	ENSMUST00000144002.8	ENSMUSG00000085399.8	Foxd2os	chr4	lncRNA	forkhead box D2, opposite strand
chr4	114826561;114827699	114827661;114844163	-	114826561	114844163	cassetteExon	0.5	100	100	ENSMUST00000030491.9	ENSMUSG00000028719.9	Cmpk1	chr4	protein_coding	cytidine monophosphate (UMP-CMP) kinase 1
chr4	114826561;114828555	114828489;114844163	-	114826561	114844163	cassetteExon	0.5	100	100	ENSMUST00000030491.9	ENSMUSG00000028719.9	Cmpk1	chr4	protein_coding	cytidine monophosphate (UMP-CMP) kinase 1
chr4	114842158	114844163	-	114826561	114844163	A3SS	0.25	50	50	ENSMUST00000030491.9	ENSMUSG00000028719.9	Cmpk1	chr4	protein_coding	cytidine monophosphate (UMP-CMP) kinase 1
chr4	114826561;114828555	114828489;114844163	-	114826561;114827699	114827661;114844163	MXE	0.5	100	100	ENSMUST00000133066.2	ENSMUSG00000028719.9	Cmpk1	chr4	protein_coding	cytidine monophosphate (UMP-CMP) kinase 1
chr4	114842158	114844163	-	114827699	114844163	A3SS	0.25	50	50	ENSMUST00000133066.2	ENSMUSG00000028719.9	Cmpk1	chr4	protein_coding	cytidine monophosphate (UMP-CMP) kinase 1
chr4	114842158	114844163	-	114828555	114844163	A3SS	0.25	50	50	ENSMUST00000129317.2	ENSMUSG00000028719.9	Cmpk1	chr4	protein_coding	cytidine monophosphate (UMP-CMP) kinase 1
chr4	114864520	114867261	+	114864520;114866715	114866468;114867261	ES	0.5	50	50	ENSMUST00000030490.13	ENSMUSG00000028718.17	Stil	chr4	protein_coding	Scl/Tal1 interrupting locus
chr4	114878786	114887066	+	114878786;114881614	114880679;114887066	ES	0.5	50	50	ENSMUST00000030490.13	ENSMUSG00000028718.17	Stil	chr4	protein_coding	Scl/Tal1 interrupting locus
chr4	114873484;114878350	114878245;114878672	+	114873484	114878672	cassetteExon	0.5	100	100	ENSMUST00000030490.13	ENSMUSG00000028718.17	Stil	chr4	protein_coding	Scl/Tal1 interrupting locus
chr4	114878786;114879190	114878977;114880679	+	114878786	114880679	cassetteExon	0.5	100	100	ENSMUST00000030490.13	ENSMUSG00000028718.17	Stil	chr4	protein_coding	Scl/Tal1 interrupting locus
chr4	114878786	114878977	+	114878786	114887066	A3SS	0.33	50	50	ENSMUST00000129957.8	ENSMUSG00000028718.17	Stil	chr4	protein_coding	Scl/Tal1 interrupting locus
chr4	114878786	114880679	+	114878786	114887066	A3SS	0.33	50	50	ENSMUST00000129957.8	ENSMUSG00000028718.17	Stil	chr4	protein_coding	Scl/Tal1 interrupting locus
chr4	114881614	114887066	+	114878786	114887066	A5SS	0.5	50	50	ENSMUST00000129957.8	ENSMUSG00000028718.17	Stil	chr4	protein_coding	Scl/Tal1 interrupting locus
chr4	114878786	114880679	+	114878786	114878977	3pMXE	0.33	50	50	ENSMUST00000130401.2	ENSMUSG00000028718.17	Stil	chr4	protein_coding	Scl/Tal1 interrupting locus
chr4	114878786	114880679	+	114879190	114880679	A5SS	0.5	50	50	ENSMUST00000144316.2	ENSMUSG00000028718.17	Stil	chr4	protein_coding	Scl/Tal1 interrupting locus
chr4	114914728	114916716	+	114913666	114916716	A5SS	0.33	50	50	ENSMUST00000030489.9	ENSMUSG00000028717.13	Tal1	chr4	protein_coding	T cell acute lymphocytic leukemia 1
chr4	114915068	114916716	+	114913666	114916716	A5SS	0.33	50	50	ENSMUST00000030489.9	ENSMUSG00000028717.13	Tal1	chr4	protein_coding	T cell acute lymphocytic leukemia 1
chr4	114915068	114916716	+	114914728	114916716	A5SS	0.33	50	50	ENSMUST00000136946.8	ENSMUSG00000028717.13	Tal1	chr4	protein_coding	T cell acute lymphocytic leukemia 1
chr4	114947459	114948339	+	114946409	114948339	A5SS	0.33	50	50	ENSMUST00000171877.8	ENSMUSG00000028716.16	Pdzk1ip1	chr4	protein_coding	PDZK1 interacting protein 1
chr4	114947721	114948339	+	114946409	114948339	A5SS	0.33	50	50	ENSMUST00000171877.8	ENSMUSG00000028716.16	Pdzk1ip1	chr4	protein_coding	PDZK1 interacting protein 1
chr4	114947721	114948339	+	114947459	114948339	A5SS	0.33	50	50	ENSMUST00000139710.8	ENSMUSG00000028716.16	Pdzk1ip1	chr4	protein_coding	PDZK1 interacting protein 1
chr4	115377463	115378265	+	115377493	115378265	A5SS	0.5	50	50	ENSMUST00000058785.10	ENSMUSG00000066072.14	Cyp4a10	chr4	protein_coding	cytochrome P450, family 4, subfamily a, polypeptide 10
chr4	115422351	115423677	+	115422351;115422912	115422868;115423677	ES	0.5	50	50	ENSMUST00000141033.8	ENSMUSG00000028712.13	Cyp4a31	chr4	protein_coding	cytochrome P450, family 4, subfamily a, polypeptide 31
chr4	115421102	115422210	+	115421102	115422207	A3SS	0.5	50	50	ENSMUST00000141033.8	ENSMUSG00000028712.13	Cyp4a31	chr4	protein_coding	cytochrome P450, family 4, subfamily a, polypeptide 31
chr4	115431961	115432104	+	115431961	115432087	A3SS	0.5	50	50	ENSMUST00000030486.15	ENSMUSG00000028712.13	Cyp4a31	chr4	protein_coding	cytochrome P450, family 4, subfamily a, polypeptide 31
chr4	115458360;115459601	115459457;115460125	+	115458360	115460125	cassetteExon	0.5	100	100	ENSMUST00000129918.2	ENSMUSG00000063929.7	Cyp4a32	chr4	protein_coding	cytochrome P450, family 4, subfamily a, polypeptide 32
chr4	115460169;115463969	115463842;115466824	+	115460169	115466824	cassetteExon	0.5	100	100	ENSMUST00000129918.2	ENSMUSG00000063929.7	Cyp4a32	chr4	protein_coding	cytochrome P450, family 4, subfamily a, polypeptide 32
chr4	115484137	115485866	-	115484137	115485533	A5SS&ES	0.5	50	50	ENSMUST00000135569.8	ENSMUSG00000028713.18	Cyp4b1	chr4	protein_coding	cytochrome P450, family 4, subfamily b, polypeptide 1
chr4	115492935	115493029	-	115492935	115493071	A5SS	0.5	50	50	ENSMUST00000135569.8	ENSMUSG00000028713.18	Cyp4b1	chr4	protein_coding	cytochrome P450, family 4, subfamily b, polypeptide 1
chr4	115616092	115619415	+	115616092;115617258	115617067;115619415	ES	0.5	50	50	ENSMUST00000106525.9	ENSMUSG00000034210.15	Efcab14	chr4	protein_coding	EF-hand calcium binding domain 14
chr4	115623709	115625812	+	115623709	115631035	A3SS	0.5	50	50	ENSMUST00000106525.9	ENSMUSG00000034210.15	Efcab14	chr4	protein_coding	EF-hand calcium binding domain 14
chr4	115631219	115632258	+	115631202	115632258	A5SS	0.5	50	50	ENSMUST00000074425.13	ENSMUSG00000034210.15	Efcab14	chr4	protein_coding	EF-hand calcium binding domain 14
chr4	115653999	115668199	+	115653999	115655163	3pMXE	0.5	50	50	ENSMUST00000177280.8	ENSMUSG00000028710.19	Atpaf1	chr4	protein_coding	ATP synthase mitochondrial F1 complex assembly factor 1
chr4	115645567;115647828	115647778;115648420	+	115645567	115648420	cassetteExon	0.5	100	100	ENSMUST00000177280.8	ENSMUSG00000028710.19	Atpaf1	chr4	protein_coding	ATP synthase mitochondrial F1 complex assembly factor 1
chr4	115645149	115645459	+	115642501	115645459	A5SS	0.5	50	50	ENSMUST00000177280.8	ENSMUSG00000028710.19	Atpaf1	chr4	protein_coding	ATP synthase mitochondrial F1 complex assembly factor 1
chr4	115657622	115668199	+	115653999	115668199	A5SS	0.5	50	50	ENSMUST00000176192.3	ENSMUSG00000028710.19	Atpaf1	chr4	protein_coding	ATP synthase mitochondrial F1 complex assembly factor 1
chr4	115685923	115688420	+	115685438	115688420	A5SS	0.5	50	50	ENSMUST00000030477.4	ENSMUSG00000028709.4	Mob3c	chr4	protein_coding	MOB kinase activator 3C
chr4	115720253	115723659	+	115720253;115721809	115721736;115723659	ES	0.5	50	50	ENSMUST00000019677.12	ENSMUSG00000028708.17	Mknk1	chr4	protein_coding	MAP kinase-interacting serine/threonine kinase 1
chr4	115732742	115735147	+	115732742;115733821	115733778;115735147	ES	0.5	50	50	ENSMUST00000019677.12	ENSMUSG00000028708.17	Mknk1	chr4	protein_coding	MAP kinase-interacting serine/threonine kinase 1
chr4	115696478;115702862	115702819;115705417	+	115696478	115705417	cassetteExon	0.5	100	100	ENSMUST00000019677.12	ENSMUSG00000028708.17	Mknk1	chr4	protein_coding	MAP kinase-interacting serine/threonine kinase 1
chr4	115705559;115712204	115712099;115714229	+	115705559	115714229	cassetteExon	0.5	100	100	ENSMUST00000019677.12	ENSMUSG00000028708.17	Mknk1	chr4	protein_coding	MAP kinase-interacting serine/threonine kinase 1
chr4	115696478	115705249	+	115696478	115705417	A3SS	0.25	50	50	ENSMUST00000019677.12	ENSMUSG00000028708.17	Mknk1	chr4	protein_coding	MAP kinase-interacting serine/threonine kinase 1
chr4	115696478	115714231	+	115696478	115705417	A3SS&ES	0.25	50	50	ENSMUST00000019677.12	ENSMUSG00000028708.17	Mknk1	chr4	protein_coding	MAP kinase-interacting serine/threonine kinase 1
chr4	115723763	115724493	+	115723763	115727508	A3SS	0.5	50	50	ENSMUST00000019677.12	ENSMUSG00000028708.17	Mknk1	chr4	protein_coding	MAP kinase-interacting serine/threonine kinase 1
chr4	115730503	115731956	+	115730503	115731817	A3SS	0.5	50	50	ENSMUST00000019677.12	ENSMUSG00000028708.17	Mknk1	chr4	protein_coding	MAP kinase-interacting serine/threonine kinase 1
chr4	115720253	115723659	+	115720253	115721736	3pMXE	0.5	50	50	ENSMUST00000144427.8	ENSMUSG00000028708.17	Mknk1	chr4	protein_coding	MAP kinase-interacting serine/threonine kinase 1
chr4	115696478	115702819	+	115696478	115714231	A3SS	0.25	50	50	ENSMUST00000144427.8	ENSMUSG00000028708.17	Mknk1	chr4	protein_coding	MAP kinase-interacting serine/threonine kinase 1
chr4	115696478	115705249	+	115696478	115714231	A3SS	0.25	50	50	ENSMUST00000144427.8	ENSMUSG00000028708.17	Mknk1	chr4	protein_coding	MAP kinase-interacting serine/threonine kinase 1
chr4	115696478	115705249	+	115696478	115702819	A3SS&ES	0.25	50	50	ENSMUST00000106513.10	ENSMUSG00000028708.17	Mknk1	chr4	protein_coding	MAP kinase-interacting serine/threonine kinase 1
chr4	115732742	115735147	+	115732742	115733778	3pMXE	0.5	50	50	ENSMUST00000150201.8	ENSMUSG00000028708.17	Mknk1	chr4	protein_coding	MAP kinase-interacting serine/threonine kinase 1
chr4	115777923	115780846	-	115777908	115780846	A3SS	0.5	50	50	ENSMUST00000064806.13	ENSMUSG00000028707.16	Dmbx1	chr4	protein_coding	diencephalon/mesencephalon homeobox 1
chr4	115855812	115856018	-	115826381	115856018	A3SS	0.5	50	50	ENSMUST00000125761.8	ENSMUSG00000034171.14	Faah	chr4	protein_coding	fatty acid amide hydrolase
chr4	115862981	115865377	-	115862918	115865377	A3SS	0.5	50	50	ENSMUST00000125761.8	ENSMUSG00000034171.14	Faah	chr4	protein_coding	fatty acid amide hydrolase
chr4	115897426;115898304	115898075;115905527	-	115897426;115902036	115901882;115905527	MXE	0.5	100	100	ENSMUST00000030475.3	ENSMUSG00000028706.15	Nsun4	chr4	protein_coding	NOL1/NOP2/Sun domain family, member 4
chr4	115897426;115900397	115900298;115901882	-	115897426	115901882	cassetteExon	0.5	100	100	ENSMUST00000030475.3	ENSMUSG00000028706.15	Nsun4	chr4	protein_coding	NOL1/NOP2/Sun domain family, member 4
chr4	115902036	115903925	-	115902036	115905527	A5SS	0.5	50	50	ENSMUST00000030475.3	ENSMUSG00000028706.15	Nsun4	chr4	protein_coding	NOL1/NOP2/Sun domain family, member 4
chr4	115905861	115906472	-	115905861	115910881	A5SS	0.33	50	50	ENSMUST00000030475.3	ENSMUSG00000028706.15	Nsun4	chr4	protein_coding	NOL1/NOP2/Sun domain family, member 4
chr4	115905861	115907839	-	115905861	115910881	A5SS	0.33	50	50	ENSMUST00000030475.3	ENSMUSG00000028706.15	Nsun4	chr4	protein_coding	NOL1/NOP2/Sun domain family, member 4
chr4	115897426	115900298	-	115897426	115898075	A5SS&ES	0.33	50	50	ENSMUST00000030474.12	ENSMUSG00000028706.15	Nsun4	chr4	protein_coding	NOL1/NOP2/Sun domain family, member 4
chr4	115905861	115906472	-	115905861	115907839	A5SS	0.33	50	50	ENSMUST00000165493.8	ENSMUSG00000028706.15	Nsun4	chr4	protein_coding	NOL1/NOP2/Sun domain family, member 4
chr4	115898304	115905527	-	115902036	115905527	3pMXE	0.5	50	50	ENSMUST00000152712.2	ENSMUSG00000028706.15	Nsun4	chr4	protein_coding	NOL1/NOP2/Sun domain family, member 4
chr4	115927221	115927934	-	115927116	115927934	A3SS	0.5	50	50	ENSMUST00000050580.11	ENSMUSG00000063882.13	Uqcrh	chr4	protein_coding	ubiquinol-cytochrome c reductase hinge protein
chr4	115927221	115927934	-	115927221	115927865	A5SS	0.5	50	50	ENSMUST00000134760.2	ENSMUSG00000063882.13	Uqcrh	chr4	protein_coding	ubiquinol-cytochrome c reductase hinge protein
chr4	115932804;115936179	115936079;115936586	+	115932804	115936586	cassetteExon	0.5	100	100	ENSMUST00000030471.9	ENSMUSG00000028703.15	Lrrc41	chr4	protein_coding	leucine rich repeat containing 41
chr4	115937816;115944915	115944867;115945644	+	115937816	115945644	cassetteExon	0.5	100	100	ENSMUST00000030471.9	ENSMUSG00000028703.15	Lrrc41	chr4	protein_coding	leucine rich repeat containing 41
chr4	115937816	115940074	+	115937816	115945644	A3SS	0.25	50	50	ENSMUST00000030471.9	ENSMUSG00000028703.15	Lrrc41	chr4	protein_coding	leucine rich repeat containing 41
chr4	115937816	115940078	+	115937816	115945644	A3SS	0.25	50	50	ENSMUST00000030471.9	ENSMUSG00000028703.15	Lrrc41	chr4	protein_coding	leucine rich repeat containing 41
chr4	115934222	115936586	+	115932804	115936586	A5SS	0.33	50	50	ENSMUST00000030471.9	ENSMUSG00000028703.15	Lrrc41	chr4	protein_coding	leucine rich repeat containing 41
chr4	115937816	115944867	+	115937816	115940074	3pMXE	0.25	50	50	ENSMUST00000154274.8	ENSMUSG00000028703.15	Lrrc41	chr4	protein_coding	leucine rich repeat containing 41
chr4	115937816	115940078	+	115937816	115940074	A3SS	0.25	50	50	ENSMUST00000154274.8	ENSMUSG00000028703.15	Lrrc41	chr4	protein_coding	leucine rich repeat containing 41
chr4	115934222	115936586	+	115936179	115936586	A5SS&ES	0.33	50	50	ENSMUST00000154274.8	ENSMUSG00000028703.15	Lrrc41	chr4	protein_coding	leucine rich repeat containing 41
chr4	115937816	115940078	+	115937816	115944867	A3SS	0.25	50	50	ENSMUST00000133799.8	ENSMUSG00000028703.15	Lrrc41	chr4	protein_coding	leucine rich repeat containing 41
chr4	115967671	115968388	-	115967953	115968388	A3SS&ES	0.5	50	50	ENSMUST00000102705.10	ENSMUSG00000028702.16	Rad54l	chr4	protein_coding	RAD54 like (S. cerevisiae)
chr4	115969738	115969874	-	115969738	115976035	A5SS	0.5	50	50	ENSMUST00000102705.10	ENSMUSG00000028702.16	Rad54l	chr4	protein_coding	RAD54 like (S. cerevisiae)
chr4	115995025	116008262	+	115995025	115995903	3pMXE	0.33	50	50	ENSMUST00000144311.2	ENSMUSG00000028700.15	Pomgnt1	chr4	protein_coding	protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase
chr4	115995025	116008271	+	115995025	115995903	3pMXE	0.33	50	50	ENSMUST00000144311.2	ENSMUSG00000028700.15	Pomgnt1	chr4	protein_coding	protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase
chr4	116010173	116011039	+	116010173;116010865	116010748;116011039	ES	0.5	50	50	ENSMUST00000120083.8	ENSMUSG00000028700.15	Pomgnt1	chr4	protein_coding	protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase
chr4	116010865	116011289	+	116010865;116011137	116011039;116011289	ES	0.5	50	50	ENSMUST00000120083.8	ENSMUSG00000028700.15	Pomgnt1	chr4	protein_coding	protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase
chr4	116013418	116015349	+	116013418;116015154	116015090;116015349	ES	0.5	50	50	ENSMUST00000120083.8	ENSMUSG00000028700.15	Pomgnt1	chr4	protein_coding	protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase
chr4	115995025	116008271	+	115995025	116008262	A3SS	0.33	50	50	ENSMUST00000120083.8	ENSMUSG00000028700.15	Pomgnt1	chr4	protein_coding	protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase
chr4	116012343	116012565	+	116012343	116012426	A3SS&ES	0.5	50	50	ENSMUST00000120083.8	ENSMUSG00000028700.15	Pomgnt1	chr4	protein_coding	protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase
chr4	116007814	116008262	+	115995025	116008262	A5SS	0.5	50	50	ENSMUST00000120083.8	ENSMUSG00000028700.15	Pomgnt1	chr4	protein_coding	protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase
chr4	116008820	116009017	+	116008440	116009017	A5SS	0.5	50	50	ENSMUST00000120083.8	ENSMUSG00000028700.15	Pomgnt1	chr4	protein_coding	protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase
chr4	116010173;116010865	116010748;116011289	+	116010173;116011137	116011039;116011289	MXE	0.5	100	100	ENSMUST00000136855.8	ENSMUSG00000028700.15	Pomgnt1	chr4	protein_coding	protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase
chr4	116013418	116015349	+	116015154	116015349	5pMXE	0.5	50	50	ENSMUST00000151325.2	ENSMUSG00000028700.15	Pomgnt1	chr4	protein_coding	protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase
chr4	115995031	116008392	-	115995031	116001494	5pMXE	0.5	50	50	ENSMUST00000030469.5	ENSMUSG00000028701.5	Lurap1	chr4	protein_coding	leucine rich adaptor protein 1
chr4	116024269	116024628	-	116024269	116024663	A5SS	0.5	50	50	ENSMUST00000030465.10	ENSMUSG00000028699.10	Tspan1	chr4	protein_coding	tetraspanin 1
chr4	116030826	116113365	+	116030826	116031361	3pMXE	0.5	50	50	ENSMUST00000106492.3	ENSMUSG00000078593.3	1700042G07Rik	chr4	protein_coding	RIKEN cDNA 1700042G07 gene
chr4	116143395	116148872	+	116143395;116144196	116144020;116148872	ES	0.5	50	50	ENSMUST00000216692.2	ENSMUSG00000111410.2	Gm49337	chr4	protein_coding	predicted gene, 49337
chr4	116079610	116113365	+	116030826	116113365	A5SS	0.5	50	50	ENSMUST00000216692.2	ENSMUSG00000111410.2	Gm49337	chr4	protein_coding	predicted gene, 49337
chr4	116210261	116248800	-	116210261	116228674	5pMXE	0.33	50	50	ENSMUST00000239239.2	ENSMUSG00000003810.14	Mast2	chr4	protein_coding	microtubule associated serine/threonine kinase 2
chr4	116187666;116190630	116190610;116194619	-	116187666	116194619	cassetteExon	0.5	100	100	ENSMUST00000239239.2	ENSMUSG00000003810.14	Mast2	chr4	protein_coding	microtubule associated serine/threonine kinase 2
chr4	116210261;116226127	116225933;116228674	-	116210261	116228674	cassetteExon	0.5	100	100	ENSMUST00000239239.2	ENSMUSG00000003810.14	Mast2	chr4	protein_coding	microtubule associated serine/threonine kinase 2
chr4	116165534	116165844	-	116165531	116165844	A3SS	0.5	50	50	ENSMUST00000239239.2	ENSMUSG00000003810.14	Mast2	chr4	protein_coding	microtubule associated serine/threonine kinase 2
chr4	116167151	116167654	-	116167239	116167654	A3SS	0.5	50	50	ENSMUST00000239239.2	ENSMUSG00000003810.14	Mast2	chr4	protein_coding	microtubule associated serine/threonine kinase 2
chr4	116173203	116173660	-	116173228	116173660	A3SS	0.5	50	50	ENSMUST00000239239.2	ENSMUSG00000003810.14	Mast2	chr4	protein_coding	microtubule associated serine/threonine kinase 2
chr4	116210261;116225981	116225933;116248800	-	116210261	116248800	cassetteExon	0.5	100	100	ENSMUST00000106484.8	ENSMUSG00000003810.14	Mast2	chr4	protein_coding	microtubule associated serine/threonine kinase 2
chr4	116248831	116262560	-	116248831	116287603	A5SS	0.33	50	50	ENSMUST00000106484.8	ENSMUSG00000003810.14	Mast2	chr4	protein_coding	microtubule associated serine/threonine kinase 2
chr4	116248831	116263971	-	116248831	116287603	A5SS	0.33	50	50	ENSMUST00000106484.8	ENSMUSG00000003810.14	Mast2	chr4	protein_coding	microtubule associated serine/threonine kinase 2
chr4	116248831	116263971	-	116248831	116262560	5pMXE	0.33	50	50	ENSMUST00000123072.8	ENSMUSG00000003810.14	Mast2	chr4	protein_coding	microtubule associated serine/threonine kinase 2
chr4	116248828	116262560	-	116248831	116262560	A3SS	0.5	50	50	ENSMUST00000123072.8	ENSMUSG00000003810.14	Mast2	chr4	protein_coding	microtubule associated serine/threonine kinase 2
chr4	116187666	116194619	-	116190630	116194619	3pMXE	0.5	50	50	ENSMUST00000134460.8	ENSMUSG00000003810.14	Mast2	chr4	protein_coding	microtubule associated serine/threonine kinase 2
chr4	116210261	116228674	-	116210261	116225933	A5SS&ES	0.33	50	50	ENSMUST00000134460.8	ENSMUSG00000003810.14	Mast2	chr4	protein_coding	microtubule associated serine/threonine kinase 2
chr4	116364847	116367727	+	116364847	116367719	A3SS	0.5	50	50	ENSMUST00000106479.8	ENSMUSG00000028696.13	Ipp	chr4	protein_coding	IAP promoted placental gene
chr4	116415346	116426361	+	116415025	116426361	A5SS	0.5	50	50	ENSMUST00000030460.15	ENSMUSG00000034042.17	Gpbp1l1	chr4	protein_coding	GC-rich promoter binding protein 1-like 1
chr4	116455158	116455697	+	116455158;116455484	116455371;116455697	ES	0.5	50	50	ENSMUST00000121907.9	ENSMUSG00000034035.19	Ccdc17	chr4	protein_coding	coiled-coil domain containing 17
chr4	116456687	116457084	+	116456687;116456864	116456754;116457084	ES	0.5	50	50	ENSMUST00000121907.9	ENSMUSG00000034035.19	Ccdc17	chr4	protein_coding	coiled-coil domain containing 17
chr4	116454298;116454565	116454460;116454635	+	116454298	116454635	cassetteExon	0.5	100	100	ENSMUST00000121907.9	ENSMUSG00000034035.19	Ccdc17	chr4	protein_coding	coiled-coil domain containing 17
chr4	116455158	116455697	+	116455158	116455371	3pMXE	0.5	50	50	ENSMUST00000146777.2	ENSMUSG00000034035.19	Ccdc17	chr4	protein_coding	coiled-coil domain containing 17
chr4	116469278	116476067	-	116469278;116471607	116471527;116476067	ES	0.5	50	50	ENSMUST00000030457.12	ENSMUSG00000028693.16	Nasp	chr4	protein_coding	nuclear autoantigenic sperm protein (histone-binding)
chr4	116468574	116469169	-	116462960	116469169	A3SS	0.5	50	50	ENSMUST00000030457.12	ENSMUSG00000028693.16	Nasp	chr4	protein_coding	nuclear autoantigenic sperm protein (histone-binding)
chr4	116462960	116467600	-	116462960	116469169	A5SS	0.5	50	50	ENSMUST00000030457.12	ENSMUSG00000028693.16	Nasp	chr4	protein_coding	nuclear autoantigenic sperm protein (histone-binding)
chr4	116462960	116469169	-	116462960;116468574	116467600;116469169	ES	0.5	50	50	ENSMUST00000030456.14	ENSMUSG00000028693.16	Nasp	chr4	protein_coding	nuclear autoantigenic sperm protein (histone-binding)
chr4	116502790	116506561	-	116502790	116508536	A5SS	0.5	50	50	ENSMUST00000030455.15	ENSMUSG00000028692.15	Akr1a1	chr4	protein_coding	aldo-keto reductase family 1, member A1 (aldehyde reductase)
chr4	116542857	116544575	+	116542857	116544604	A3SS	0.5	50	50	ENSMUST00000135573.8	ENSMUSG00000028691.13	Prdx1	chr4	protein_coding	peroxiredoxin 1
chr4	116543333	116544604	+	116542857	116544604	A5SS	0.33	50	50	ENSMUST00000135573.8	ENSMUSG00000028691.13	Prdx1	chr4	protein_coding	peroxiredoxin 1
chr4	116543337	116544604	+	116542857	116544604	A5SS	0.33	50	50	ENSMUST00000135573.8	ENSMUSG00000028691.13	Prdx1	chr4	protein_coding	peroxiredoxin 1
chr4	116543333	116544604	+	116543337	116544604	A5SS	0.33	50	50	ENSMUST00000129315.8	ENSMUSG00000028691.13	Prdx1	chr4	protein_coding	peroxiredoxin 1
chr4	116570023;116571346	116571213;116572037	+	116570023	116572037	cassetteExon	0.5	100	100	ENSMUST00000030452.13	ENSMUSG00000028689.15	Ccdc163	chr4	protein_coding	coiled-coil domain containing 163
chr4	116570023;116571346	116571285;116572037	+	116570023	116572037	cassetteExon	0.5	100	100	ENSMUST00000030452.13	ENSMUSG00000028689.15	Ccdc163	chr4	protein_coding	coiled-coil domain containing 163
chr4	116566291	116566440	+	116566291	116566437	A3SS	0.5	50	50	ENSMUST00000030452.13	ENSMUSG00000028689.15	Ccdc163	chr4	protein_coding	coiled-coil domain containing 163
chr4	116566470	116566596	+	116566470	116566679	A3SS	0.33	50	50	ENSMUST00000030452.13	ENSMUSG00000028689.15	Ccdc163	chr4	protein_coding	coiled-coil domain containing 163
chr4	116566470	116566635	+	116566470	116566679	A3SS	0.33	50	50	ENSMUST00000030452.13	ENSMUSG00000028689.15	Ccdc163	chr4	protein_coding	coiled-coil domain containing 163
chr4	116567481	116568483	+	116567481	116568508	A3SS	0.5	50	50	ENSMUST00000030452.13	ENSMUSG00000028689.15	Ccdc163	chr4	protein_coding	coiled-coil domain containing 163
chr4	116565853	116566635	+	116565853;116566470	116566459;116566635	ES	0.33	50	50	ENSMUST00000106462.9	ENSMUSG00000028689.15	Ccdc163	chr4	protein_coding	coiled-coil domain containing 163
chr4	116565853	116566140	+	116565853	116566459	A3SS	0.25	50	50	ENSMUST00000106462.9	ENSMUSG00000028689.15	Ccdc163	chr4	protein_coding	coiled-coil domain containing 163
chr4	116565853	116566205	+	116565853	116566459	A3SS	0.25	50	50	ENSMUST00000106462.9	ENSMUSG00000028689.15	Ccdc163	chr4	protein_coding	coiled-coil domain containing 163
chr4	116566470	116566596	+	116566470	116566635	A3SS	0.33	50	50	ENSMUST00000106462.9	ENSMUSG00000028689.15	Ccdc163	chr4	protein_coding	coiled-coil domain containing 163
chr4	116570023	116571213	+	116570023	116571285	A3SS	0.33	50	50	ENSMUST00000106462.9	ENSMUSG00000028689.15	Ccdc163	chr4	protein_coding	coiled-coil domain containing 163
chr4	116565948	116566635	+	116566470	116566635	A5SS&ES	0.33	50	50	ENSMUST00000106462.9	ENSMUSG00000028689.15	Ccdc163	chr4	protein_coding	coiled-coil domain containing 163
chr4	116565853;116566470	116566140;116566635	+	116565853	116566635	cassetteExon	0.5	100	100	ENSMUST00000138305.8	ENSMUSG00000028689.15	Ccdc163	chr4	protein_coding	coiled-coil domain containing 163
chr4	116565853;116566470	116566205;116566635	+	116565853	116566635	cassetteExon	0.5	100	100	ENSMUST00000138305.8	ENSMUSG00000028689.15	Ccdc163	chr4	protein_coding	coiled-coil domain containing 163
chr4	116565948	116566635	+	116565853	116566635	A5SS	0.33	50	50	ENSMUST00000138305.8	ENSMUSG00000028689.15	Ccdc163	chr4	protein_coding	coiled-coil domain containing 163
chr4	116565853	116566635	+	116566470	116566635	A5SS&ES	0.33	50	50	ENSMUST00000125671.8	ENSMUSG00000028689.15	Ccdc163	chr4	protein_coding	coiled-coil domain containing 163
chr4	116565853	116566205	+	116565853	116566140	A3SS	0.25	50	50	ENSMUST00000130828.8	ENSMUSG00000028689.15	Ccdc163	chr4	protein_coding	coiled-coil domain containing 163
chr4	116578453	116598813	+	116572151	116598813	A5SS	0.33	50	50	ENSMUST00000124628.8	ENSMUSG00000028689.15	Ccdc163	chr4	protein_coding	coiled-coil domain containing 163
chr4	116581904	116598813	+	116572151	116598813	A5SS	0.33	50	50	ENSMUST00000124628.8	ENSMUSG00000028689.15	Ccdc163	chr4	protein_coding	coiled-coil domain containing 163
chr4	116658729	116659421	+	116658729;116659003	116658917;116659421	ES	0.5	50	50	ENSMUST00000045542.13	ENSMUSG00000033985.18	Tesk2	chr4	protein_coding	testis-specific kinase 2
chr4	116578453;116581904	116581823;116598813	+	116578453	116598813	cassetteExon	0.5	100	100	ENSMUST00000045542.13	ENSMUSG00000033985.18	Tesk2	chr4	protein_coding	testis-specific kinase 2
chr4	116658441	116658650	+	116658441	116658646	A3SS	0.33	50	50	ENSMUST00000045542.13	ENSMUSG00000033985.18	Tesk2	chr4	protein_coding	testis-specific kinase 2
chr4	116658441	116658915	+	116658441	116658646	A3SS&ES	0.33	50	50	ENSMUST00000045542.13	ENSMUSG00000033985.18	Tesk2	chr4	protein_coding	testis-specific kinase 2
chr4	116658441	116658915	+	116658441	116658650	A3SS&ES	0.33	50	50	ENSMUST00000106459.8	ENSMUSG00000033985.18	Tesk2	chr4	protein_coding	testis-specific kinase 2
chr4	116658729	116659421	+	116658729	116658917	A3SS&ES	0.5	50	50	ENSMUST00000106459.8	ENSMUSG00000033985.18	Tesk2	chr4	protein_coding	testis-specific kinase 2
chr4	116659003	116659421	+	116659003	116662036	A3SS	0.5	50	50	ENSMUST00000106459.8	ENSMUSG00000033985.18	Tesk2	chr4	protein_coding	testis-specific kinase 2
chr4	116658441;116659003	116658915;116659421	+	116658441;116658729	116658646;116659421	MXE	0.5	100	100	ENSMUST00000106456.2	ENSMUSG00000033985.18	Tesk2	chr4	protein_coding	testis-specific kinase 2
chr4	116658441;116658729	116658650;116659421	+	116658441;116659003	116658915;116659421	MXE	0.5	100	100	ENSMUST00000142529.2	ENSMUSG00000033985.18	Tesk2	chr4	protein_coding	testis-specific kinase 2
chr4	116662252	116662329	-	116656405	116662329	A3SS	0.5	50	50	ENSMUST00000106455.8	ENSMUSG00000028688.14	Toe1	chr4	protein_coding	target of EGR1, member 1 (nuclear)
chr4	116662597	116662683	-	116662491	116662683	A3SS	0.5	50	50	ENSMUST00000106455.8	ENSMUSG00000028688.14	Toe1	chr4	protein_coding	target of EGR1, member 1 (nuclear)
chr4	116664001	116664665	-	116663956	116664665	A3SS	0.5	50	50	ENSMUST00000106455.8	ENSMUSG00000028688.14	Toe1	chr4	protein_coding	target of EGR1, member 1 (nuclear)
chr4	116673035	116673510	+	116673035;116673232	116673159;116673510	ES	0.5	50	50	ENSMUST00000102699.8	ENSMUSG00000028687.18	Mutyh	chr4	protein_coding	mutY DNA glycosylase
chr4	116673893	116674152	+	116673893;116674072	116673975;116674152	ES	0.5	50	50	ENSMUST00000102699.8	ENSMUSG00000028687.18	Mutyh	chr4	protein_coding	mutY DNA glycosylase
chr4	116664968;116668138	116668046;116671516	+	116664968	116671516	cassetteExon	0.5	100	100	ENSMUST00000102699.8	ENSMUSG00000028687.18	Mutyh	chr4	protein_coding	mutY DNA glycosylase
chr4	116848955	116850023	-	116848955;116849922	116849761;116850023	ES	0.5	50	50	ENSMUST00000030446.15	ENSMUSG00000028684.15	Urod	chr4	protein_coding	uroporphyrinogen decarboxylase
chr4	116850220	116850585	-	116850220;116850507	116850445;116850585	ES	0.5	50	50	ENSMUST00000030446.15	ENSMUSG00000028684.15	Urod	chr4	protein_coding	uroporphyrinogen decarboxylase
chr4	116850662	116850782	-	116850664	116850782	A3SS	0.5	50	50	ENSMUST00000030446.15	ENSMUSG00000028684.15	Urod	chr4	protein_coding	uroporphyrinogen decarboxylase
chr4	116850220;116850507	116850445;116851528	-	116850220	116851528	cassetteExon	0.5	100	100	ENSMUST00000135164.2	ENSMUSG00000028684.15	Urod	chr4	protein_coding	uroporphyrinogen decarboxylase
chr4	116850220;116850894	116850445;116851528	-	116850220	116851528	cassetteExon	0.5	100	100	ENSMUST00000135164.2	ENSMUSG00000028684.15	Urod	chr4	protein_coding	uroporphyrinogen decarboxylase
chr4	116850220;116850894	116850585;116851528	-	116850220	116851528	cassetteExon	0.5	100	100	ENSMUST00000135164.2	ENSMUSG00000028684.15	Urod	chr4	protein_coding	uroporphyrinogen decarboxylase
chr4	116848955	116850023	-	116848955	116849761	A5SS	0.5	50	50	ENSMUST00000135164.2	ENSMUSG00000028684.15	Urod	chr4	protein_coding	uroporphyrinogen decarboxylase
chr4	116850220;116850894	116850585;116851528	-	116850220;116850507	116850445;116851528	MXE	0.5	100	100	ENSMUST00000130273.8	ENSMUSG00000028684.15	Urod	chr4	protein_coding	uroporphyrinogen decarboxylase
chr4	116850507;116850894	116850585;116851528	-	116850507	116851528	cassetteExon	0.5	100	100	ENSMUST00000130273.8	ENSMUSG00000028684.15	Urod	chr4	protein_coding	uroporphyrinogen decarboxylase
chr4	116848955	116850023	-	116849922	116850023	3pMXE	0.5	50	50	ENSMUST00000123079.8	ENSMUSG00000028684.15	Urod	chr4	protein_coding	uroporphyrinogen decarboxylase
chr4	116850220	116850585	-	116850507	116850585	3pMXE	0.5	50	50	ENSMUST00000139209.8	ENSMUSG00000028684.15	Urod	chr4	protein_coding	uroporphyrinogen decarboxylase
chr4	116850507	116851528	-	116850894	116851528	A3SS&ES	0.5	50	50	ENSMUST00000139816.2	ENSMUSG00000028684.15	Urod	chr4	protein_coding	uroporphyrinogen decarboxylase
chr4	116927984	116943886	+	116927984;116938858	116938755;116943886	ES	0.5	50	50	ENSMUST00000106448.9	ENSMUSG00000028683.15	Eif2b3	chr4	protein_coding	eukaryotic translation initiation factor 2B, subunit 3
chr4	116916050	116916383	+	116916050	116922538	A3SS	0.5	50	50	ENSMUST00000106448.9	ENSMUSG00000028683.15	Eif2b3	chr4	protein_coding	eukaryotic translation initiation factor 2B, subunit 3
chr4	116927984	116931158	+	116927984	116938755	A3SS	0.33	50	50	ENSMUST00000106448.9	ENSMUSG00000028683.15	Eif2b3	chr4	protein_coding	eukaryotic translation initiation factor 2B, subunit 3
chr4	116927984	116931158	+	116927984	116943886	A3SS	0.33	50	50	ENSMUST00000070610.6	ENSMUSG00000028683.15	Eif2b3	chr4	protein_coding	eukaryotic translation initiation factor 2B, subunit 3
chr4	116927984	116943886	+	116938858	116943886	5pMXE	0.5	50	50	ENSMUST00000129587.2	ENSMUSG00000028683.15	Eif2b3	chr4	protein_coding	eukaryotic translation initiation factor 2B, subunit 3
chr4	116965217	116965357	+	116965217	116965352	A3SS	0.5	50	50	ENSMUST00000030443.12	ENSMUSG00000028681.12	Ptch2	chr4	protein_coding	patched 2
chr4	116965239	116965352	+	116965217	116965352	A5SS	0.5	50	50	ENSMUST00000030443.12	ENSMUSG00000028681.12	Ptch2	chr4	protein_coding	patched 2
chr4	116978058	116978611	-	116978058;116978526	116978395;116978611	ES	0.5	50	50	ENSMUST00000153924.8	ENSMUSG00000073771.12	Btbd19	chr4	protein_coding	BTB (POZ) domain containing 19
chr4	116978058;116978293	116978168;116978395	-	116978058	116978395	cassetteExon	0.5	100	100	ENSMUST00000153924.8	ENSMUSG00000073771.12	Btbd19	chr4	protein_coding	BTB (POZ) domain containing 19
chr4	116978058;116978679	116978395;116979416	-	116978058	116979416	cassetteExon	0.5	100	100	ENSMUST00000097915.4	ENSMUSG00000073771.12	Btbd19	chr4	protein_coding	BTB (POZ) domain containing 19
chr4	116978058;116978679	116978611;116979416	-	116978058	116979416	cassetteExon	0.5	100	100	ENSMUST00000097915.4	ENSMUSG00000073771.12	Btbd19	chr4	protein_coding	BTB (POZ) domain containing 19
chr4	116978058	116978168	-	116978058	116979416	A5SS	0.25	50	50	ENSMUST00000097915.4	ENSMUSG00000073771.12	Btbd19	chr4	protein_coding	BTB (POZ) domain containing 19
chr4	116980979	116982526	-	116980979;116981337	116981136;116982526	ES	0.33	50	50	ENSMUST00000183310.2	ENSMUSG00000073771.12	Btbd19	chr4	protein_coding	BTB (POZ) domain containing 19
chr4	116980979;116981923	116981701;116982526	-	116980979;116981337	116981136;116982526	MXE	0.5	100	100	ENSMUST00000183310.2	ENSMUSG00000073771.12	Btbd19	chr4	protein_coding	BTB (POZ) domain containing 19
chr4	116981337	116982183	-	116981337	116982526	A5SS	0.5	50	50	ENSMUST00000183310.2	ENSMUSG00000073771.12	Btbd19	chr4	protein_coding	BTB (POZ) domain containing 19
chr4	116978058;116978526	116978168;116978611	-	116978058	116978611	cassetteExon	0.5	100	100	ENSMUST00000125896.9	ENSMUSG00000073771.12	Btbd19	chr4	protein_coding	BTB (POZ) domain containing 19
chr4	116978058	116978611	-	116978058	116978168	5pMXE	0.25	50	50	ENSMUST00000153303.2	ENSMUSG00000073771.12	Btbd19	chr4	protein_coding	BTB (POZ) domain containing 19
chr4	116978058	116978395	-	116978058	116978168	A5SS	0.25	50	50	ENSMUST00000153303.2	ENSMUSG00000073771.12	Btbd19	chr4	protein_coding	BTB (POZ) domain containing 19
chr4	116978058	116978611	-	116978526	116978611	3pMXE	0.5	50	50	ENSMUST00000143213.9	ENSMUSG00000073771.12	Btbd19	chr4	protein_coding	BTB (POZ) domain containing 19
chr4	116980979;116981923	116981701;116982526	-	116980979	116982526	cassetteExon	0.5	100	100	ENSMUST00000143213.9	ENSMUSG00000073771.12	Btbd19	chr4	protein_coding	BTB (POZ) domain containing 19
chr4	116978058	116979416	-	116978679	116979416	3pMXE	0.5	50	50	ENSMUST00000153257.2	ENSMUSG00000073771.12	Btbd19	chr4	protein_coding	BTB (POZ) domain containing 19
chr4	116984055;116984285	116984179;116984473	+	116984055	116984473	cassetteExon	0.5	100	100	ENSMUST00000134074.8	ENSMUSG00000047671.9	Dynlt4	chr4	protein_coding	dynein light chain Tctex-type 4
chr4	116984541	116985171	+	116984541	116985168	A3SS	0.5	50	50	ENSMUST00000134074.8	ENSMUSG00000047671.9	Dynlt4	chr4	protein_coding	dynein light chain Tctex-type 4
chr4	116988014	116988310	-	116988014	116988259	A5SS	0.5	50	50	ENSMUST00000126135.2	ENSMUSG00000028680.15	Plk3	chr4	protein_coding	polo like kinase 3
chr4	117035443;117035785	117035539;117037769	-	117035443	117037769	cassetteExon	0.5	100	100	ENSMUST00000065896.9	ENSMUSG00000028678.14	Kif2c	chr4	protein_coding	kinesin family member 2C
chr4	117035443;117035785	117035598;117037769	-	117035443	117037769	cassetteExon	0.5	100	100	ENSMUST00000065896.9	ENSMUSG00000028678.14	Kif2c	chr4	protein_coding	kinesin family member 2C
chr4	117035443	117037769	-	117035443	117035598	5pMXE	0.33	50	50	ENSMUST00000106436.8	ENSMUSG00000028678.14	Kif2c	chr4	protein_coding	kinesin family member 2C
chr4	117035443	117035539	-	117035443	117035598	A5SS	0.33	50	50	ENSMUST00000106436.8	ENSMUSG00000028678.14	Kif2c	chr4	protein_coding	kinesin family member 2C
chr4	117035785	117035906	-	117035785	117037769	A5SS	0.5	50	50	ENSMUST00000142138.8	ENSMUSG00000028678.14	Kif2c	chr4	protein_coding	kinesin family member 2C
chr4	117035443	117037769	-	117035443	117035539	5pMXE	0.33	50	50	ENSMUST00000148918.2	ENSMUSG00000028678.14	Kif2c	chr4	protein_coding	kinesin family member 2C
chr4	117100954	117108950	-	117097542	117108950	A3SS	0.5	50	50	ENSMUST00000165128.9	ENSMUSG00000060268.13	Armh1	chr4	protein_coding	armadillo-like helical domain containing 1
chr4	117109331;117109737	117109634;117123057	+	117109331	117123057	cassetteExon	0.5	100	100	ENSMUST00000062824.12	ENSMUSG00000048772.16	Tmem53	chr4	protein_coding	transmembrane protein 53
chr4	117109331;117109910	117109634;117123057	+	117109331	117123057	cassetteExon	0.5	100	100	ENSMUST00000062824.12	ENSMUSG00000048772.16	Tmem53	chr4	protein_coding	transmembrane protein 53
chr4	117109331;117109910	117109825;117123057	+	117109331	117123057	cassetteExon	0.5	100	100	ENSMUST00000062824.12	ENSMUSG00000048772.16	Tmem53	chr4	protein_coding	transmembrane protein 53
chr4	117109352	117123057	+	117109331	117123057	A5SS	0.25	50	50	ENSMUST00000062824.12	ENSMUSG00000048772.16	Tmem53	chr4	protein_coding	transmembrane protein 53
chr4	117109331;117109737	117109634;117123057	+	117109331;117109910	117109825;117123057	MXE	0.5	100	100	ENSMUST00000125943.8	ENSMUSG00000048772.16	Tmem53	chr4	protein_coding	transmembrane protein 53
chr4	117109352	117123057	+	117109910	117123057	A5SS&ES	0.25	50	50	ENSMUST00000125943.8	ENSMUSG00000048772.16	Tmem53	chr4	protein_coding	transmembrane protein 53
chr4	117109556	117109825	+	117109331	117109825	A5SS	0.5	50	50	ENSMUST00000125943.8	ENSMUSG00000048772.16	Tmem53	chr4	protein_coding	transmembrane protein 53
chr4	117109737	117123057	+	117109352	117123057	A5SS	0.25	50	50	ENSMUST00000106434.8	ENSMUSG00000048772.16	Tmem53	chr4	protein_coding	transmembrane protein 53
chr4	117109737	117123057	+	117109910	117123057	A5SS&ES	0.5	50	50	ENSMUST00000106433.2	ENSMUSG00000048772.16	Tmem53	chr4	protein_coding	transmembrane protein 53
chr4	117134061	117134568	-	117130552	117134568	A3SS	0.5	50	50	ENSMUST00000030439.15	ENSMUSG00000028677.20	Rnf220	chr4	protein_coding	ring finger protein 220
chr4	117142708	117143048	-	117142708	117143126	A5SS	0.5	50	50	ENSMUST00000030439.15	ENSMUSG00000028677.20	Rnf220	chr4	protein_coding	ring finger protein 220
chr4	117143169	117145560	-	117143169	117146223	A5SS	0.33	50	50	ENSMUST00000030439.15	ENSMUSG00000028677.20	Rnf220	chr4	protein_coding	ring finger protein 220
chr4	117143169	117145720	-	117143169	117146223	A5SS	0.33	50	50	ENSMUST00000030439.15	ENSMUSG00000028677.20	Rnf220	chr4	protein_coding	ring finger protein 220
chr4	117146265	117146396	-	117146265	117153329	A5SS	0.25	50	50	ENSMUST00000030439.15	ENSMUSG00000028677.20	Rnf220	chr4	protein_coding	ring finger protein 220
chr4	117146265	117146400	-	117146265	117153329	A5SS	0.25	50	50	ENSMUST00000030439.15	ENSMUSG00000028677.20	Rnf220	chr4	protein_coding	ring finger protein 220
chr4	117146265	117146921	-	117146265	117153329	A5SS	0.25	50	50	ENSMUST00000030439.15	ENSMUSG00000028677.20	Rnf220	chr4	protein_coding	ring finger protein 220
chr4	117164875	117232511	-	117164875	117346786	A5SS	0.5	50	50	ENSMUST00000030439.15	ENSMUSG00000028677.20	Rnf220	chr4	protein_coding	ring finger protein 220
chr4	117347527	117351847	-	117347527	117353880	A5SS	0.5	50	50	ENSMUST00000030439.15	ENSMUSG00000028677.20	Rnf220	chr4	protein_coding	ring finger protein 220
chr4	117143169	117145560	-	117143169	117145720	A5SS	0.33	50	50	ENSMUST00000102690.9	ENSMUSG00000028677.20	Rnf220	chr4	protein_coding	ring finger protein 220
chr4	117146265	117146921	-	117146265	117146400	5pMXE	0.25	50	50	ENSMUST00000221654.2	ENSMUSG00000028677.20	Rnf220	chr4	protein_coding	ring finger protein 220
chr4	117146265	117146396	-	117146265	117146400	A5SS	0.25	50	50	ENSMUST00000221654.2	ENSMUSG00000028677.20	Rnf220	chr4	protein_coding	ring finger protein 220
chr4	117146265	117146396	-	117146265	117146921	A5SS	0.25	50	50	ENSMUST00000128122.9	ENSMUSG00000028677.20	Rnf220	chr4	protein_coding	ring finger protein 220
chr4	117153465	117154281	+	117153465	117154774	A3SS	0.5	50	50	ENSMUST00000137607.2	ENSMUSG00000085749.2	Gm12843	chr4	lncRNA	predicted gene 12843
chr4	117439913;117445177	117444982;117446295	+	117439913	117446295	cassetteExon	0.5	100	100	ENSMUST00000037127.15	ENSMUSG00000033423.17	Eri3	chr4	protein_coding	exoribonuclease 3
chr4	117494906	117506504	+	117472438	117506504	A5SS	0.5	50	50	ENSMUST00000037127.15	ENSMUSG00000033423.17	Eri3	chr4	protein_coding	exoribonuclease 3
chr4	117539179	117539411	-	117539190	117539411	A3SS	0.5	50	50	ENSMUST00000135582.8	ENSMUSG00000009640.12	Dmap1	chr4	protein_coding	DNA methyltransferase 1-associated protein 1
chr4	117714018	117714327	+	117714018	117714400	A3SS	0.5	50	50	ENSMUST00000063857.11	ENSMUSG00000028542.18	Slc6a9	chr4	protein_coding	solute carrier family 6 (neurotransmitter transporter, glycine), member 9
chr4	117692344	117700216	+	117691913	117700216	A5SS	0.33	50	50	ENSMUST00000063857.11	ENSMUSG00000028542.18	Slc6a9	chr4	protein_coding	solute carrier family 6 (neurotransmitter transporter, glycine), member 9
chr4	117692674	117700216	+	117691913	117700216	A5SS	0.33	50	50	ENSMUST00000063857.11	ENSMUSG00000028542.18	Slc6a9	chr4	protein_coding	solute carrier family 6 (neurotransmitter transporter, glycine), member 9
chr4	117706663	117713072	+	117700332	117713072	A5SS	0.2	50	50	ENSMUST00000063857.11	ENSMUSG00000028542.18	Slc6a9	chr4	protein_coding	solute carrier family 6 (neurotransmitter transporter, glycine), member 9
chr4	117712475	117713072	+	117700332	117713072	A5SS	0.2	50	50	ENSMUST00000063857.11	ENSMUSG00000028542.18	Slc6a9	chr4	protein_coding	solute carrier family 6 (neurotransmitter transporter, glycine), member 9
chr4	117712713	117713072	+	117700332	117713072	A5SS	0.2	50	50	ENSMUST00000063857.11	ENSMUSG00000028542.18	Slc6a9	chr4	protein_coding	solute carrier family 6 (neurotransmitter transporter, glycine), member 9
chr4	117712957	117713072	+	117700332	117713072	A5SS	0.2	50	50	ENSMUST00000063857.11	ENSMUSG00000028542.18	Slc6a9	chr4	protein_coding	solute carrier family 6 (neurotransmitter transporter, glycine), member 9
chr4	117713145	117713887	+	117713228	117713887	A5SS	0.33	50	50	ENSMUST00000063857.11	ENSMUSG00000028542.18	Slc6a9	chr4	protein_coding	solute carrier family 6 (neurotransmitter transporter, glycine), member 9
chr4	117713183	117713887	+	117713228	117713887	A5SS	0.33	50	50	ENSMUST00000063857.11	ENSMUSG00000028542.18	Slc6a9	chr4	protein_coding	solute carrier family 6 (neurotransmitter transporter, glycine), member 9
chr4	117692674	117700216	+	117692344	117700216	A5SS	0.33	50	50	ENSMUST00000151316.2	ENSMUSG00000028542.18	Slc6a9	chr4	protein_coding	solute carrier family 6 (neurotransmitter transporter, glycine), member 9
chr4	117713183	117713887	+	117713145	117713887	A5SS	0.33	50	50	ENSMUST00000149168.2	ENSMUSG00000028542.18	Slc6a9	chr4	protein_coding	solute carrier family 6 (neurotransmitter transporter, glycine), member 9
chr4	117700332	117713072	+	117700332	117714400	A3SS	0.5	50	50	ENSMUST00000169885.8	ENSMUSG00000028542.18	Slc6a9	chr4	protein_coding	solute carrier family 6 (neurotransmitter transporter, glycine), member 9
chr4	117714018	117714400	+	117700332	117714400	A5SS	0.5	50	50	ENSMUST00000169885.8	ENSMUSG00000028542.18	Slc6a9	chr4	protein_coding	solute carrier family 6 (neurotransmitter transporter, glycine), member 9
chr4	117706663;117712475	117712320;117713072	+	117706663	117713072	cassetteExon	0.5	100	100	ENSMUST00000132043.9	ENSMUSG00000028542.18	Slc6a9	chr4	protein_coding	solute carrier family 6 (neurotransmitter transporter, glycine), member 9
chr4	117706663;117712713	117712320;117713072	+	117706663	117713072	cassetteExon	0.5	100	100	ENSMUST00000132043.9	ENSMUSG00000028542.18	Slc6a9	chr4	protein_coding	solute carrier family 6 (neurotransmitter transporter, glycine), member 9
chr4	117712957	117713072	+	117706663	117713072	A5SS	0.2	50	50	ENSMUST00000132043.9	ENSMUSG00000028542.18	Slc6a9	chr4	protein_coding	solute carrier family 6 (neurotransmitter transporter, glycine), member 9
chr4	117712713	117713072	+	117712475	117713072	A5SS	0.25	50	50	ENSMUST00000169990.8	ENSMUSG00000028542.18	Slc6a9	chr4	protein_coding	solute carrier family 6 (neurotransmitter transporter, glycine), member 9
chr4	117712957	117713072	+	117712475	117713072	A5SS	0.25	50	50	ENSMUST00000169990.8	ENSMUSG00000028542.18	Slc6a9	chr4	protein_coding	solute carrier family 6 (neurotransmitter transporter, glycine), member 9
chr4	117706663	117713072	+	117712713	117713072	5pMXE	0.2	50	50	ENSMUST00000123994.3	ENSMUSG00000028542.18	Slc6a9	chr4	protein_coding	solute carrier family 6 (neurotransmitter transporter, glycine), member 9
chr4	117712957	117713072	+	117712713	117713072	A5SS	0.2	50	50	ENSMUST00000123994.3	ENSMUSG00000028542.18	Slc6a9	chr4	protein_coding	solute carrier family 6 (neurotransmitter transporter, glycine), member 9
chr4	117728338	117728944	-	117728386	117728944	A3SS	0.5	50	50	ENSMUST00000164853.8	ENSMUSG00000078588.11	Ccdc24	chr4	protein_coding	coiled-coil domain containing 24
chr4	117728386	117728481	-	117728386	117728944	A5SS	0.5	50	50	ENSMUST00000164853.8	ENSMUSG00000078588.11	Ccdc24	chr4	protein_coding	coiled-coil domain containing 24
chr4	117729349	117729592	-	117729377	117729592	A3SS	0.33	50	50	ENSMUST00000106422.9	ENSMUSG00000078588.11	Ccdc24	chr4	protein_coding	coiled-coil domain containing 24
chr4	117728386	117729592	-	117729349	117729592	A3SS&ES	0.33	50	50	ENSMUST00000171052.8	ENSMUSG00000078588.11	Ccdc24	chr4	protein_coding	coiled-coil domain containing 24
chr4	117728386	117729592	-	117728386	117728481	5pMXE	0.33	50	50	ENSMUST00000130758.8	ENSMUSG00000078588.11	Ccdc24	chr4	protein_coding	coiled-coil domain containing 24
chr4	117728386;117729349	117728944;117729592	-	117728386	117729592	cassetteExon	0.5	100	100	ENSMUST00000131938.2	ENSMUSG00000078588.11	Ccdc24	chr4	protein_coding	coiled-coil domain containing 24
chr4	117728386;117729377	117728944;117729592	-	117728386	117729592	cassetteExon	0.5	100	100	ENSMUST00000131938.2	ENSMUSG00000078588.11	Ccdc24	chr4	protein_coding	coiled-coil domain containing 24
chr4	117734826;117735034	117734980;117738065	-	117734826	117738065	cassetteExon	0.5	100	100	ENSMUST00000084325.10	ENSMUSG00000028541.15	B4galt2	chr4	protein_coding	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2
chr4	117738867;117739014	117738973;117740299	-	117738867	117740299	cassetteExon	0.5	100	100	ENSMUST00000084325.10	ENSMUSG00000028541.15	B4galt2	chr4	protein_coding	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2
chr4	117738704	117740299	-	117738867	117740299	A3SS	0.33	50	50	ENSMUST00000084325.10	ENSMUSG00000028541.15	B4galt2	chr4	protein_coding	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2
chr4	117728386	117729592	-	117728386	117728944	A5SS&ES	0.33	50	50	ENSMUST00000084325.10	ENSMUSG00000028541.15	B4galt2	chr4	protein_coding	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2
chr4	117738704	117740299	-	117739014	117740299	A3SS&ES	0.33	50	50	ENSMUST00000167443.8	ENSMUSG00000028541.15	B4galt2	chr4	protein_coding	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2
chr4	117738902	117738973	-	117738867	117738973	A3SS	0.5	50	50	ENSMUST00000167443.8	ENSMUSG00000028541.15	B4galt2	chr4	protein_coding	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2
chr4	117738867	117740299	-	117739014	117740299	A3SS&ES	0.33	50	50	ENSMUST00000106421.9	ENSMUSG00000028541.15	B4galt2	chr4	protein_coding	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2
chr4	117738867	117740299	-	117738867	117738973	5pMXE	0.5	50	50	ENSMUST00000171548.2	ENSMUSG00000028541.15	B4galt2	chr4	protein_coding	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2
chr4	117743556	117744367	-	117743556;117743835	117743787;117744367	ES	0.33	50	50	ENSMUST00000036380.14	ENSMUSG00000033379.14	Atp6v0b	chr4	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit B
chr4	117743891	117744367	-	117743835	117744367	A3SS	0.33	50	50	ENSMUST00000036380.14	ENSMUSG00000033379.14	Atp6v0b	chr4	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit B
chr4	117743835	117743940	-	117743835	117744367	A5SS	0.5	50	50	ENSMUST00000036380.14	ENSMUSG00000033379.14	Atp6v0b	chr4	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit B
chr4	117743556;117743891	117743787;117744367	-	117743556	117744367	cassetteExon	0.5	100	100	ENSMUST00000150204.8	ENSMUSG00000033379.14	Atp6v0b	chr4	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit B
chr4	117743556	117744367	-	117743556	117743787	5pMXE	0.5	50	50	ENSMUST00000124974.2	ENSMUSG00000033379.14	Atp6v0b	chr4	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit B
chr4	117748315	117748918	-	117748315	117748512	A5SS&ES	0.5	50	50	ENSMUST00000030265.4	ENSMUSG00000028540.7	Dph2	chr4	protein_coding	DPH2 homolog
chr4	117752122	117752409	-	117752042	117752409	A3SS	0.5	50	50	ENSMUST00000134752.8	ENSMUSG00000033365.15	Ipo13	chr4	protein_coding	importin 13
chr4	117758835;117759273	117759194;117760318	-	117758835	117760318	cassetteExon	0.5	100	100	ENSMUST00000036156.6	ENSMUSG00000033365.15	Ipo13	chr4	protein_coding	importin 13
chr4	117785360	117786216	-	117785339	117786216	A3SS	0.33	50	50	ENSMUST00000070816.9	ENSMUSG00000028539.15	Artn	chr4	protein_coding	artemin
chr4	117785567	117786216	-	117785339	117786216	A3SS	0.33	50	50	ENSMUST00000070816.9	ENSMUSG00000028539.15	Artn	chr4	protein_coding	artemin
chr4	117786365	117786583	-	117786449	117786583	A3SS	0.5	50	50	ENSMUST00000070816.9	ENSMUSG00000028539.15	Artn	chr4	protein_coding	artemin
chr4	117785567	117786216	-	117785360	117786216	A3SS	0.33	50	50	ENSMUST00000133703.8	ENSMUSG00000028539.15	Artn	chr4	protein_coding	artemin
chr4	117889079	117964746	-	117889079;117911894	117911847;117964746	ES	0.5	50	50	ENSMUST00000030263.9	ENSMUSG00000028538.13	St3gal3	chr4	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 3
chr4	117797697;117814715	117814632;117815625	-	117797697	117815625	cassetteExon	0.5	100	100	ENSMUST00000030263.9	ENSMUSG00000028538.13	St3gal3	chr4	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 3
chr4	117821621	117825535	-	117821621	117871902	A5SS	0.5	50	50	ENSMUST00000030263.9	ENSMUSG00000028538.13	St3gal3	chr4	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 3
chr4	117964890	117991931	-	117964890	117991587	A5SS	0.5	50	50	ENSMUST00000030263.9	ENSMUSG00000028538.13	St3gal3	chr4	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 3
chr4	118006553	118010387	-	118006063	118010387	A3SS	0.5	50	50	ENSMUST00000106406.9	ENSMUSG00000033326.16	Kdm4a	chr4	protein_coding	lysine (K)-specific demethylase 4A
chr4	118034760	118037090	-	118034773	118037090	A3SS	0.5	50	50	ENSMUST00000106406.9	ENSMUSG00000033326.16	Kdm4a	chr4	protein_coding	lysine (K)-specific demethylase 4A
chr4	118034760	118037090	-	118034760	118036799	5pMXE	0.5	50	50	ENSMUST00000097911.9	ENSMUSG00000033326.16	Kdm4a	chr4	protein_coding	lysine (K)-specific demethylase 4A
chr4	118082323	118083651	-	118082323;118083574	118082996;118083651	ES	0.5	50	50	ENSMUST00000049074.13	ENSMUSG00000033295.15	Ptprf	chr4	protein_coding	protein tyrosine phosphatase, receptor type, F
chr4	118088085	118092156	-	118088085;118088988	118088683;118092156	ES	0.5	50	50	ENSMUST00000049074.13	ENSMUSG00000033295.15	Ptprf	chr4	protein_coding	protein tyrosine phosphatase, receptor type, F
chr4	118074386;118075241	118075209;118077690	-	118074386	118077690	cassetteExon	0.5	100	100	ENSMUST00000049074.13	ENSMUSG00000033295.15	Ptprf	chr4	protein_coding	protein tyrosine phosphatase, receptor type, F
chr4	118083768;118085042	118085016;118087892	-	118083768	118087892	cassetteExon	0.5	100	100	ENSMUST00000049074.13	ENSMUSG00000033295.15	Ptprf	chr4	protein_coding	protein tyrosine phosphatase, receptor type, F
chr4	118106206;118109290	118109273;118114686	-	118106206	118114686	cassetteExon	0.5	100	100	ENSMUST00000049074.13	ENSMUSG00000033295.15	Ptprf	chr4	protein_coding	protein tyrosine phosphatase, receptor type, F
chr4	118083574	118083651	-	118082323	118083651	A3SS	0.5	50	50	ENSMUST00000150096.8	ENSMUSG00000033295.15	Ptprf	chr4	protein_coding	protein tyrosine phosphatase, receptor type, F
chr4	118082323	118082996	-	118082323	118083651	A5SS	0.5	50	50	ENSMUST00000150096.8	ENSMUSG00000033295.15	Ptprf	chr4	protein_coding	protein tyrosine phosphatase, receptor type, F
chr4	118217428	118218813	+	118217428;118217586	118217503;118218813	ES	0.5	50	50	ENSMUST00000194248.2	ENSMUSG00000006395.17	Hyi	chr4	polymorphic_pseudogene	hydroxypyruvate isomerase (putative)
chr4	118223512;118224819	118224639;118226377	-	118223512	118226377	cassetteExon	0.5	100	100	ENSMUST00000075406.12	ENSMUSG00000033253.19	Szt2	chr4	protein_coding	SZT2 subunit of KICSTOR complex
chr4	118266583	118268084	+	118266583	118268082	A3SS	0.5	50	50	ENSMUST00000084319.11	ENSMUSG00000006392.17	Med8	chr4	protein_coding	mediator complex subunit 8
chr4	118268200	118268723	+	118268200	118268895	A3SS	0.33	50	50	ENSMUST00000084319.11	ENSMUSG00000006392.17	Med8	chr4	protein_coding	mediator complex subunit 8
chr4	118268200	118268855	+	118268200	118268895	A3SS	0.33	50	50	ENSMUST00000084319.11	ENSMUSG00000006392.17	Med8	chr4	protein_coding	mediator complex subunit 8
chr4	118266746	118268082	+	118266583	118268082	A5SS	0.5	50	50	ENSMUST00000084319.11	ENSMUSG00000006392.17	Med8	chr4	protein_coding	mediator complex subunit 8
chr4	118269049	118269549	+	118268999	118269549	A5SS	0.5	50	50	ENSMUST00000084319.11	ENSMUSG00000006392.17	Med8	chr4	protein_coding	mediator complex subunit 8
chr4	118270922	118271921	+	118271072	118271921	A5SS	0.5	50	50	ENSMUST00000084319.11	ENSMUSG00000006392.17	Med8	chr4	protein_coding	mediator complex subunit 8
chr4	118268200	118268855	+	118268200;118268770	118268723;118268855	ES	0.5	50	50	ENSMUST00000106384.10	ENSMUSG00000006392.17	Med8	chr4	protein_coding	mediator complex subunit 8
chr4	118287752	118288260	+	118287752;118288102	118287912;118288260	ES	0.5	50	50	ENSMUST00000006557.13	ENSMUSG00000006390.16	Elovl1	chr4	protein_coding	elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1
chr4	118285412	118285641	+	118285412	118287693	A3SS	0.5	50	50	ENSMUST00000006557.13	ENSMUSG00000006390.16	Elovl1	chr4	protein_coding	elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1
chr4	118287027	118287693	+	118285412	118287693	A5SS	0.5	50	50	ENSMUST00000006557.13	ENSMUSG00000006390.16	Elovl1	chr4	protein_coding	elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1
chr4	118292073	118292974	-	118292073;118292898	118292670;118292974	ES	0.5	50	50	ENSMUST00000006565.13	ENSMUSG00000006398.16	Cdc20	chr4	protein_coding	cell division cycle 20
chr4	118292073	118292974	-	118292073	118292670	A5SS	0.5	50	50	ENSMUST00000151302.2	ENSMUSG00000006398.16	Cdc20	chr4	protein_coding	cell division cycle 20
chr4	118312960	118313873	-	118313140	118313873	A3SS	0.5	50	50	ENSMUST00000102671.10	ENSMUSG00000006389.14	Mpl	chr4	protein_coding	myeloproliferative leukemia virus oncogene
chr4	118312477	118312842	-	118312477	118312866	A5SS	0.5	50	50	ENSMUST00000102671.10	ENSMUSG00000006389.14	Mpl	chr4	protein_coding	myeloproliferative leukemia virus oncogene
chr4	118301301;118303711	118303249;118305743	-	118301301	118305743	cassetteExon	0.5	100	100	ENSMUST00000168404.9	ENSMUSG00000006389.14	Mpl	chr4	protein_coding	myeloproliferative leukemia virus oncogene
chr4	118331610	118332621	-	118331599	118332621	A3SS	0.5	50	50	ENSMUST00000184261.8	ENSMUSG00000033191.15	Tie1	chr4	protein_coding	tyrosine kinase with immunoglobulin-like and EGF-like domains 1
chr4	118384534	118386396	+	118384441	118386396	A5SS	0.5	50	50	ENSMUST00000106367.8	ENSMUSG00000028536.13	2610528J11Rik	chr4	protein_coding	RIKEN cDNA 2610528J11 gene
chr4	118400696	118401130	-	118400696	118400797	5pMXE	0.5	50	50	ENSMUST00000060214.10	ENSMUSG00000050854.10	Tmem125	chr4	protein_coding	transmembrane protein 125
chr4	118399957	118400326	-	118399957	118400553	A5SS	0.5	50	50	ENSMUST00000060214.10	ENSMUSG00000050854.10	Tmem125	chr4	protein_coding	transmembrane protein 125
chr4	118399880	118400326	-	118399957	118400326	A3SS	0.5	50	50	ENSMUST00000156191.2	ENSMUSG00000050854.10	Tmem125	chr4	protein_coding	transmembrane protein 125
chr4	118478437	118478558	+	118478362	118478558	A5SS	0.5	50	50	ENSMUST00000030501.15	ENSMUSG00000028729.16	Ebna1bp2	chr4	protein_coding	EBNA1 binding protein 2
chr4	118521709	118522706	+	118516184	118522706	A5SS	0.5	50	50	ENSMUST00000213189.3	ENSMUSG00000043698.10	Olfr62	chr4	protein_coding	olfactory receptor 62
chr4	118577575	118583436	+	118577743	118583436	A5SS	0.33	50	50	ENSMUST00000217334.3	ENSMUSG00000070821.7	Olfr1340	chr4	protein_coding	olfactory receptor 1340
chr4	118577747	118583436	+	118577743	118583436	A5SS	0.33	50	50	ENSMUST00000217334.3	ENSMUSG00000070821.7	Olfr1340	chr4	protein_coding	olfactory receptor 1340
chr4	118577575	118583436	+	118577747	118583436	A5SS	0.33	50	50	ENSMUST00000213436.3	ENSMUSG00000070821.7	Olfr1340	chr4	protein_coding	olfactory receptor 1340
chr4	118611747	118615682	-	118611747;118612746	118612608;118615682	ES	0.5	50	50	ENSMUST00000214922.3	ENSMUSG00000095218.4	Olfr1338	chr4	protein_coding	olfactory receptor 1338
chr4	118722074	118725990	+	118722074	118725904	A3SS	0.5	50	50	ENSMUST00000106360.3	ENSMUSG00000073769.5	Olfr1331	chr4	protein_coding	olfactory receptor 1331
chr4	118746140	118750274	+	118746140	118752508	A3SS	0.5	50	50	ENSMUST00000216386.2	ENSMUSG00000073768.4	Olfr1330	chr4	protein_coding	olfactory receptor 1330
chr4	118751560	118752508	+	118746140	118752508	A5SS	0.5	50	50	ENSMUST00000216386.2	ENSMUSG00000073768.4	Olfr1330	chr4	protein_coding	olfactory receptor 1330
chr4	118745880	118750274	+	118746140	118750274	A5SS	0.5	50	50	ENSMUST00000106361.3	ENSMUSG00000073768.4	Olfr1330	chr4	protein_coding	olfactory receptor 1330
chr4	118746140	118752508	+	118746140;118751560	118750274;118752508	ES	0.5	50	50	ENSMUST00000215186.3	ENSMUSG00000073768.4	Olfr1330	chr4	protein_coding	olfactory receptor 1330
chr4	118966169	118989320	+	118966169;118977683	118977588;118989320	ES	0.5	50	50	ENSMUST00000030398.10	ENSMUSG00000028645.12	Slc2a1	chr4	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 1
chr4	118989880	118990549	+	118989880;118990456	118990294;118990549	ES	0.5	50	50	ENSMUST00000030398.10	ENSMUSG00000028645.12	Slc2a1	chr4	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 1
chr4	118966169;118969411	118969280;118977588	+	118966169	118977588	cassetteExon	0.5	100	100	ENSMUST00000030398.10	ENSMUSG00000028645.12	Slc2a1	chr4	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 1
chr4	118966169;118973317	118973204;118977588	+	118966169	118977588	cassetteExon	0.5	100	100	ENSMUST00000030398.10	ENSMUSG00000028645.12	Slc2a1	chr4	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 1
chr4	118966169;118969411	118969280;118977588	+	118966169;118973317	118973204;118977588	MXE	0.5	100	100	ENSMUST00000134105.8	ENSMUSG00000028645.12	Slc2a1	chr4	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 1
chr4	118966169	118969280	+	118966169	118989320	A3SS	0.25	50	50	ENSMUST00000208090.2	ENSMUSG00000028645.12	Slc2a1	chr4	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 1
chr4	118966169	118973204	+	118966169	118989320	A3SS	0.25	50	50	ENSMUST00000208090.2	ENSMUSG00000028645.12	Slc2a1	chr4	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 1
chr4	119028239	119031335	-	119028239	119030243	5pMXE	0.33	50	50	ENSMUST00000052715.10	ENSMUSG00000045268.14	Zfp691	chr4	protein_coding	zinc finger protein 691
chr4	119028239	119030860	-	119028239	119030243	A5SS	0.33	50	50	ENSMUST00000052715.10	ENSMUSG00000045268.14	Zfp691	chr4	protein_coding	zinc finger protein 691
chr4	119028239	119030860	-	119028239	119031335	A5SS	0.33	50	50	ENSMUST00000106355.5	ENSMUSG00000045268.14	Zfp691	chr4	protein_coding	zinc finger protein 691
chr4	119044916;119045518	119045373;119046056	-	119044916	119046056	cassetteExon	0.5	100	100	ENSMUST00000239029.2	ENSMUSG00000028644.18	Ermap	chr4	protein_coding	erythroblast membrane-associated protein
chr4	119044916;119045531	119045373;119046056	-	119044916	119046056	cassetteExon	0.5	100	100	ENSMUST00000239029.2	ENSMUSG00000028644.18	Ermap	chr4	protein_coding	erythroblast membrane-associated protein
chr4	119043013	119044293	-	119043019	119044293	A3SS	0.5	50	50	ENSMUST00000239029.2	ENSMUSG00000028644.18	Ermap	chr4	protein_coding	erythroblast membrane-associated protein
chr4	119040072	119040507	-	119040072	119040503	A5SS	0.5	50	50	ENSMUST00000239029.2	ENSMUSG00000028644.18	Ermap	chr4	protein_coding	erythroblast membrane-associated protein
chr4	119044916	119045899	-	119044916	119046056	A5SS	0.33	50	50	ENSMUST00000239029.2	ENSMUSG00000028644.18	Ermap	chr4	protein_coding	erythroblast membrane-associated protein
chr4	119046140	119047003	-	119037296	119047003	A3SS	0.5	50	50	ENSMUST00000137080.2	ENSMUSG00000028644.18	Ermap	chr4	protein_coding	erythroblast membrane-associated protein
chr4	119037296	119037398	-	119037296	119047003	A5SS	0.5	50	50	ENSMUST00000137080.2	ENSMUSG00000028644.18	Ermap	chr4	protein_coding	erythroblast membrane-associated protein
chr4	119044916	119045373	-	119044916	119045899	A5SS	0.33	50	50	ENSMUST00000133956.8	ENSMUSG00000028644.18	Ermap	chr4	protein_coding	erythroblast membrane-associated protein
chr4	119045531	119046056	-	119045518	119046056	A3SS	0.33	50	50	ENSMUST00000141227.9	ENSMUSG00000028644.18	Ermap	chr4	protein_coding	erythroblast membrane-associated protein
chr4	119053218;119056007	119055956;119058094	+	119053218	119058094	cassetteExon	0.5	100	100	ENSMUST00000030395.9	ENSMUSG00000028643.12	Svbp	chr4	protein_coding	small vasohibin binding protein
chr4	119053218	119058111	+	119053218	119058094	A3SS	0.33	50	50	ENSMUST00000030395.9	ENSMUSG00000028643.12	Svbp	chr4	protein_coding	small vasohibin binding protein
chr4	119052972	119053069	+	119052683	119053069	A5SS	0.5	50	50	ENSMUST00000030395.9	ENSMUSG00000028643.12	Svbp	chr4	protein_coding	small vasohibin binding protein
chr4	119053218	119058111	+	119053218	119055956	A3SS&ES	0.33	50	50	ENSMUST00000106345.3	ENSMUSG00000028643.12	Svbp	chr4	protein_coding	small vasohibin binding protein
chr4	119085310;119085941	119085862;119089551	-	119085310	119089551	cassetteExon	0.5	100	100	ENSMUST00000132778.8	ENSMUSG00000078584.10	AU022252	chr4	protein_coding	expressed sequence AU022252
chr4	119062992	119066414	-	119062992	119082836	A5SS	0.5	50	50	ENSMUST00000132778.8	ENSMUSG00000078584.10	AU022252	chr4	protein_coding	expressed sequence AU022252
chr4	119089666	119089833	-	119089666	119089780	A5SS	0.5	50	50	ENSMUST00000141112.2	ENSMUSG00000078584.10	AU022252	chr4	protein_coding	expressed sequence AU022252
chr4	119095982	119098679	+	119095982;119098403	119098314;119098679	ES	0.5	50	50	ENSMUST00000121111.9	ENSMUSG00000028641.17	P3h1	chr4	protein_coding	prolyl 3-hydroxylase 1
chr4	119104403	119105088	+	119104403;119104782	119104642;119105088	ES	0.5	50	50	ENSMUST00000121111.9	ENSMUSG00000028641.17	P3h1	chr4	protein_coding	prolyl 3-hydroxylase 1
chr4	119095982;119096958	119096903;119098314	+	119095982	119098314	cassetteExon	0.5	100	100	ENSMUST00000121111.9	ENSMUSG00000028641.17	P3h1	chr4	protein_coding	prolyl 3-hydroxylase 1
chr4	119092595	119093971	+	119092595	119093974	A3SS	0.5	50	50	ENSMUST00000121111.9	ENSMUSG00000028641.17	P3h1	chr4	protein_coding	prolyl 3-hydroxylase 1
chr4	119098731	119098859	+	119098731	119098880	A3SS	0.5	50	50	ENSMUST00000121111.9	ENSMUSG00000028641.17	P3h1	chr4	protein_coding	prolyl 3-hydroxylase 1
chr4	119091175	119092443	+	119090627	119092443	A5SS	0.5	50	50	ENSMUST00000121111.9	ENSMUSG00000028641.17	P3h1	chr4	protein_coding	prolyl 3-hydroxylase 1
chr4	119095982	119096903	+	119095982	119098679	A3SS	0.33	50	50	ENSMUST00000123963.2	ENSMUSG00000028641.17	P3h1	chr4	protein_coding	prolyl 3-hydroxylase 1
chr4	119104403	119105088	+	119104403	119104642	A3SS&ES	0.5	50	50	ENSMUST00000134548.2	ENSMUSG00000028641.17	P3h1	chr4	protein_coding	prolyl 3-hydroxylase 1
chr4	119139645	119142306	-	119139645;119140067	119139978;119142306	ES	0.5	50	50	ENSMUST00000079644.13	ENSMUSG00000028639.15	Ybx1	chr4	protein_coding	Y box protein 1
chr4	119136408	119138767	-	119136396	119138767	A3SS	0.5	50	50	ENSMUST00000079644.13	ENSMUSG00000028639.15	Ybx1	chr4	protein_coding	Y box protein 1
chr4	119139645	119142306	-	119139645	119139978	5pMXE	0.5	50	50	ENSMUST00000127737.2	ENSMUSG00000028639.15	Ybx1	chr4	protein_coding	Y box protein 1
chr4	119157380	119167956	-	119157399	119167956	A3SS	0.25	50	50	ENSMUST00000056458.14	ENSMUSG00000060288.14	Ppih	chr4	protein_coding	peptidyl prolyl isomerase H
chr4	119164009	119167956	-	119157399	119167956	A3SS	0.25	50	50	ENSMUST00000056458.14	ENSMUSG00000060288.14	Ppih	chr4	protein_coding	peptidyl prolyl isomerase H
chr4	119165080	119167956	-	119157399	119167956	A3SS	0.25	50	50	ENSMUST00000056458.14	ENSMUSG00000060288.14	Ppih	chr4	protein_coding	peptidyl prolyl isomerase H
chr4	119168633	119168729	-	119168044	119168729	A3SS	0.5	50	50	ENSMUST00000056458.14	ENSMUSG00000060288.14	Ppih	chr4	protein_coding	peptidyl prolyl isomerase H
chr4	119164009	119167956	-	119157380	119167956	A3SS	0.25	50	50	ENSMUST00000106319.8	ENSMUSG00000060288.14	Ppih	chr4	protein_coding	peptidyl prolyl isomerase H
chr4	119165080	119167956	-	119157380	119167956	A3SS	0.25	50	50	ENSMUST00000106319.8	ENSMUSG00000060288.14	Ppih	chr4	protein_coding	peptidyl prolyl isomerase H
chr4	119169503	119174225	-	119168044	119174225	A3SS	0.5	50	50	ENSMUST00000106319.8	ENSMUSG00000060288.14	Ppih	chr4	protein_coding	peptidyl prolyl isomerase H
chr4	119168044	119168729	-	119168044	119174225	A5SS	0.5	50	50	ENSMUST00000106319.8	ENSMUSG00000060288.14	Ppih	chr4	protein_coding	peptidyl prolyl isomerase H
chr4	119165080	119167956	-	119164009	119167956	A3SS	0.25	50	50	ENSMUST00000147077.8	ENSMUSG00000060288.14	Ppih	chr4	protein_coding	peptidyl prolyl isomerase H
chr4	119188812	119190777	-	119188815	119190777	A3SS	0.5	50	50	ENSMUST00000238759.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119209849	119210267	-	119207071	119210267	A3SS	0.33	50	50	ENSMUST00000238759.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119209899	119210267	-	119207071	119210267	A3SS	0.33	50	50	ENSMUST00000238759.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119250216	119250739	-	119216934	119250739	A3SS	0.5	50	50	ENSMUST00000238759.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119258341	119261271	-	119258347	119261271	A3SS	0.5	50	50	ENSMUST00000238759.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119216934	119217045	-	119216934	119250739	A5SS	0.2	50	50	ENSMUST00000238759.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119216934	119225007	-	119216934	119250739	A5SS	0.2	50	50	ENSMUST00000238759.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119216934	119240868	-	119216934	119250739	A5SS	0.2	50	50	ENSMUST00000238759.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119216934	119250754	-	119216934	119250739	A5SS	0.2	50	50	ENSMUST00000238759.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119234542	119238432	-	119234542;119236469	119236344;119238432	ES	0.5	50	50	ENSMUST00000238697.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119236469	119240868	-	119236469	119238432	5pMXE	0.5	50	50	ENSMUST00000238697.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119216934;119217173	119217045;119230799	-	119216934;119225214	119225007;119230799	MXE	0.5	100	100	ENSMUST00000238697.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119216934	119250754	-	119216934	119240868	5pMXE	0.2	50	50	ENSMUST00000238723.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119230962	119240868	-	119216934	119240868	A3SS	0.14	50	50	ENSMUST00000238723.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119234542	119240868	-	119216934	119240868	A3SS	0.14	50	50	ENSMUST00000238723.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119236469	119240868	-	119216934	119240868	A3SS	0.14	50	50	ENSMUST00000238723.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119238524	119240868	-	119216934	119240868	A3SS	0.14	50	50	ENSMUST00000238723.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119238537	119240868	-	119216934	119240868	A3SS	0.14	50	50	ENSMUST00000238723.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119238581	119240868	-	119216934	119240868	A3SS	0.14	50	50	ENSMUST00000238723.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119216934	119217045	-	119216934	119240868	A5SS	0.2	50	50	ENSMUST00000238723.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119216934	119225007	-	119216934	119240868	A5SS	0.2	50	50	ENSMUST00000238723.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119216934	119217045	-	119216934	119250754	A5SS	0.2	50	50	ENSMUST00000238293.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119216934	119225007	-	119216934	119250754	A5SS	0.2	50	50	ENSMUST00000238293.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119234542	119240868	-	119234542;119236469	119236344;119240868	ES	0.14	50	50	ENSMUST00000238704.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119234542;119238524	119238432;119240868	-	119234542;119236469	119236344;119240868	MXE	0.5	100	100	ENSMUST00000238704.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119236469;119238524	119238432;119240868	-	119236469	119240868	cassetteExon	0.5	100	100	ENSMUST00000238704.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119234542;119238537	119238432;119240868	-	119234542;119236469	119236344;119240868	MXE	0.5	100	100	ENSMUST00000238704.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119236469;119238537	119238432;119240868	-	119236469	119240868	cassetteExon	0.5	100	100	ENSMUST00000238704.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119234542;119238581	119238432;119240868	-	119234542;119236469	119236344;119240868	MXE	0.5	100	100	ENSMUST00000238704.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119236469;119238581	119238432;119240868	-	119236469	119240868	cassetteExon	0.5	100	100	ENSMUST00000238704.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119216934	119225007	-	119216934	119217045	5pMXE	0.2	50	50	ENSMUST00000143494.3	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119209899	119210267	-	119209849	119210267	A3SS	0.33	50	50	ENSMUST00000143494.3	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119230962;119234542	119234408;119240868	-	119230962	119240868	cassetteExon	0.5	100	100	ENSMUST00000044781.9	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119236469	119240868	-	119230962	119240868	A3SS	0.14	50	50	ENSMUST00000044781.9	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119238524	119240868	-	119230962	119240868	A3SS	0.14	50	50	ENSMUST00000044781.9	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119238537	119240868	-	119230962	119240868	A3SS	0.14	50	50	ENSMUST00000044781.9	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119238581	119240868	-	119230962	119240868	A3SS	0.14	50	50	ENSMUST00000044781.9	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119225214	119230799	-	119217173	119230799	A3SS	0.5	50	50	ENSMUST00000238300.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119238524	119240868	-	119238537	119240868	A3SS	0.16	50	50	ENSMUST00000084307.5	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119238581	119240868	-	119238537	119240868	A3SS	0.16	50	50	ENSMUST00000084307.5	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119234542	119240868	-	119234542;119238537	119238432;119240868	ES	0.16	50	50	ENSMUST00000148236.9	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119238581	119240868	-	119238524	119240868	A3SS	0.16	50	50	ENSMUST00000238721.2	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119234542;119238524	119238432;119240868	-	119234542	119240868	cassetteExon	0.5	100	100	ENSMUST00000152879.9	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119234542;119238581	119238432;119240868	-	119234542	119240868	cassetteExon	0.5	100	100	ENSMUST00000152879.9	ENSMUSG00000028637.17	Ccdc30	chr4	protein_coding	coiled-coil domain containing 30
chr4	119278880	119279043	-	119278880	119279488	A5SS	0.5	50	50	ENSMUST00000106316.2	ENSMUSG00000028636.15	Ppcs	chr4	protein_coding	phosphopantothenoylcysteine synthetase
chr4	119302079	119307452	+	119302079;119305390	119305279;119307452	ES	0.5	50	50	ENSMUST00000094819.5	ENSMUSG00000070806.6	Zmynd12	chr4	protein_coding	zinc finger, MYND domain containing 12
chr4	119307597	119324277	+	119307597	119310769	3pMXE	0.5	50	50	ENSMUST00000094819.5	ENSMUSG00000070806.6	Zmynd12	chr4	protein_coding	zinc finger, MYND domain containing 12
chr4	119280192	119291147	+	119280192	119298946	A3SS	0.5	50	50	ENSMUST00000134147.2	ENSMUSG00000070806.6	Zmynd12	chr4	protein_coding	zinc finger, MYND domain containing 12
chr4	119294448	119298946	+	119280192	119298946	A5SS	0.5	50	50	ENSMUST00000134147.2	ENSMUSG00000070806.6	Zmynd12	chr4	protein_coding	zinc finger, MYND domain containing 12
chr4	119335218;119338249	119338189;119349494	-	119335218	119349494	cassetteExon	0.5	100	100	ENSMUST00000049994.8	ENSMUSG00000048899.9	Rimkla	chr4	protein_coding	ribosomal modification protein rimK-like family member A
chr4	119391006	119396409	-	119391006	119395805	5pMXE	0.33	50	50	ENSMUST00000079611.13	ENSMUSG00000087385.9	Frg2f1	chr4	protein_coding	FSHD region gene 2 family member 1
chr4	119388801	119390510	-	119388945	119390510	A3SS	0.5	50	50	ENSMUST00000079611.13	ENSMUSG00000087385.9	Frg2f1	chr4	protein_coding	FSHD region gene 2 family member 1
chr4	119390694	119390938	-	119390746	119390938	A3SS	0.5	50	50	ENSMUST00000079611.13	ENSMUSG00000087385.9	Frg2f1	chr4	protein_coding	FSHD region gene 2 family member 1
chr4	119391006	119392271	-	119391006	119395805	A5SS	0.33	50	50	ENSMUST00000079611.13	ENSMUSG00000087385.9	Frg2f1	chr4	protein_coding	FSHD region gene 2 family member 1
chr4	119391006	119396409	-	119391006	119392271	5pMXE	0.33	50	50	ENSMUST00000149305.8	ENSMUSG00000087385.9	Frg2f1	chr4	protein_coding	FSHD region gene 2 family member 1
chr4	119397042	119417800	+	119394365	119417800	A5SS	0.2	50	50	ENSMUST00000176012.8	ENSMUSG00000032998.17	Foxj3	chr4	protein_coding	forkhead box J3
chr4	119397754	119417800	+	119394365	119417800	A5SS	0.2	50	50	ENSMUST00000176012.8	ENSMUSG00000032998.17	Foxj3	chr4	protein_coding	forkhead box J3
chr4	119397938	119417800	+	119394365	119417800	A5SS	0.2	50	50	ENSMUST00000176012.8	ENSMUSG00000032998.17	Foxj3	chr4	protein_coding	forkhead box J3
chr4	119417028	119417800	+	119394365	119417800	A5SS	0.2	50	50	ENSMUST00000176012.8	ENSMUSG00000032998.17	Foxj3	chr4	protein_coding	forkhead box J3
chr4	119459689	119473705	+	119459689;119467288	119467187;119473705	ES	0.5	50	50	ENSMUST00000044564.15	ENSMUSG00000032998.17	Foxj3	chr4	protein_coding	forkhead box J3
chr4	119397042;119397754	119397737;119417800	+	119397042	119417800	cassetteExon	0.5	100	100	ENSMUST00000044564.15	ENSMUSG00000032998.17	Foxj3	chr4	protein_coding	forkhead box J3
chr4	119397042;119397938	119397737;119417800	+	119397042	119417800	cassetteExon	0.5	100	100	ENSMUST00000044564.15	ENSMUSG00000032998.17	Foxj3	chr4	protein_coding	forkhead box J3
chr4	119397042	119400645	+	119397042	119417800	A3SS	0.33	50	50	ENSMUST00000044564.15	ENSMUSG00000032998.17	Foxj3	chr4	protein_coding	forkhead box J3
chr4	119443021	119444967	+	119443021	119459606	A3SS	0.5	50	50	ENSMUST00000044564.15	ENSMUSG00000032998.17	Foxj3	chr4	protein_coding	forkhead box J3
chr4	119417028	119417800	+	119397042	119417800	A5SS	0.2	50	50	ENSMUST00000044564.15	ENSMUSG00000032998.17	Foxj3	chr4	protein_coding	forkhead box J3
chr4	119397042;119397754	119397737;119417800	+	119397042;119417028	119400645;119417800	MXE	0.5	100	100	ENSMUST00000138845.9	ENSMUSG00000032998.17	Foxj3	chr4	protein_coding	forkhead box J3
chr4	119397042;119397938	119397737;119417800	+	119397042;119417028	119400645;119417800	MXE	0.5	100	100	ENSMUST00000138845.9	ENSMUSG00000032998.17	Foxj3	chr4	protein_coding	forkhead box J3
chr4	119397042	119400645	+	119397042	119397737	A3SS&ES	0.33	50	50	ENSMUST00000137560.8	ENSMUSG00000032998.17	Foxj3	chr4	protein_coding	forkhead box J3
chr4	119397754	119417800	+	119397938	119417800	A5SS	0.25	50	50	ENSMUST00000137560.8	ENSMUSG00000032998.17	Foxj3	chr4	protein_coding	forkhead box J3
chr4	119417028	119417800	+	119397938	119417800	A5SS	0.25	50	50	ENSMUST00000137560.8	ENSMUSG00000032998.17	Foxj3	chr4	protein_coding	forkhead box J3
chr4	119397042	119417800	+	119397754	119417800	5pMXE	0.2	50	50	ENSMUST00000160219.2	ENSMUSG00000032998.17	Foxj3	chr4	protein_coding	forkhead box J3
chr4	119417028	119417800	+	119397754	119417800	A5SS	0.2	50	50	ENSMUST00000160219.2	ENSMUSG00000032998.17	Foxj3	chr4	protein_coding	forkhead box J3
chr4	119514912	119515978	-	119514912	119515713	A5SS	0.5	50	50	ENSMUST00000106309.9	ENSMUSG00000032978.15	Guca2b	chr4	protein_coding	guanylate cyclase activator 2b (retina)
chr4	119591059	119671875	+	119591059;119599112	119598993;119671875	ES	0.33	50	50	ENSMUST00000144907.8	ENSMUSG00000028634.18	Hivep3	chr4	protein_coding	human immunodeficiency virus type I enhancer binding protein 3
chr4	119591059;119619545	119619417;119671875	+	119591059;119599112	119598993;119671875	MXE	0.5	100	100	ENSMUST00000144907.8	ENSMUSG00000028634.18	Hivep3	chr4	protein_coding	human immunodeficiency virus type I enhancer binding protein 3
chr4	119591059;119619545	119619417;119671875	+	119591059	119671875	cassetteExon	0.5	100	100	ENSMUST00000141605.8	ENSMUSG00000028634.18	Hivep3	chr4	protein_coding	human immunodeficiency virus type I enhancer binding protein 3
chr4	119591059;119619545	119619417;119729234	+	119591059;119671987	119671875;119729234	MXE	0.5	100	100	ENSMUST00000141605.8	ENSMUSG00000028634.18	Hivep3	chr4	protein_coding	human immunodeficiency virus type I enhancer binding protein 3
chr4	119619545	119729234	+	119619545;119671987	119671875;119729234	ES	0.5	50	50	ENSMUST00000123698.8	ENSMUSG00000028634.18	Hivep3	chr4	protein_coding	human immunodeficiency virus type I enhancer binding protein 3
chr4	119671987	119854371	+	119671987	119729234	3pMXE	0.5	50	50	ENSMUST00000123698.8	ENSMUSG00000028634.18	Hivep3	chr4	protein_coding	human immunodeficiency virus type I enhancer binding protein 3
chr4	119618529	119619417	+	119591059	119619417	A5SS	0.5	50	50	ENSMUST00000123698.8	ENSMUSG00000028634.18	Hivep3	chr4	protein_coding	human immunodeficiency virus type I enhancer binding protein 3
chr4	119619545	119729234	+	119671987	119729234	5pMXE	0.5	50	50	ENSMUST00000136547.2	ENSMUSG00000028634.18	Hivep3	chr4	protein_coding	human immunodeficiency virus type I enhancer binding protein 3
chr4	119890162	119922064	+	119854449	119922064	A5SS	0.5	50	50	ENSMUST00000106307.9	ENSMUSG00000028634.18	Hivep3	chr4	protein_coding	human immunodeficiency virus type I enhancer binding protein 3
chr4	120310972	120320272	+	120310972;120319352	120319210;120320272	ES	0.5	50	50	ENSMUST00000000087.13	ENSMUSG00000000085.17	Scmh1	chr4	protein_coding	sex comb on midleg homolog 1
chr4	120365409	120374083	+	120365409;120372471	120372271;120374083	ES	0.5	50	50	ENSMUST00000000087.13	ENSMUSG00000000085.17	Scmh1	chr4	protein_coding	sex comb on midleg homolog 1
chr4	120379846	120385353	+	120379846;120382260	120382195;120385353	ES	0.5	50	50	ENSMUST00000000087.13	ENSMUSG00000000085.17	Scmh1	chr4	protein_coding	sex comb on midleg homolog 1
chr4	120310972;120313706	120313482;120319210	+	120310972	120319210	cassetteExon	0.5	100	100	ENSMUST00000000087.13	ENSMUSG00000000085.17	Scmh1	chr4	protein_coding	sex comb on midleg homolog 1
chr4	120374903	120379652	+	120374274	120379652	A5SS	0.5	50	50	ENSMUST00000000087.13	ENSMUSG00000000085.17	Scmh1	chr4	protein_coding	sex comb on midleg homolog 1
chr4	120310972	120313482	+	120310972	120320272	A3SS	0.33	50	50	ENSMUST00000151345.8	ENSMUSG00000000085.17	Scmh1	chr4	protein_coding	sex comb on midleg homolog 1
chr4	120310972	120320272	+	120319352	120320272	5pMXE	0.5	50	50	ENSMUST00000106298.10	ENSMUSG00000000085.17	Scmh1	chr4	protein_coding	sex comb on midleg homolog 1
chr4	120399962	120402215	-	120399962;120401021	120400925;120402215	ES	0.5	50	50	ENSMUST00000030381.8	ENSMUSG00000028633.8	Ctps	chr4	protein_coding	cytidine 5'-triphosphate synthase
chr4	120574745	120605705	-	120574745	120604057	5pMXE	0.5	50	50	ENSMUST00000030376.8	ENSMUSG00000028631.8	Kcnq4	chr4	protein_coding	potassium voltage-gated channel, subfamily Q, member 4
chr4	120630964	120638669	-	120630964;120636430	120636317;120638669	ES	0.5	50	50	ENSMUST00000120779.8	ENSMUSG00000032897.18	Nfyc	chr4	protein_coding	nuclear transcription factor-Y gamma
chr4	120636430	120647574	-	120636430;120638740	120638669;120647574	ES	0.33	50	50	ENSMUST00000120779.8	ENSMUSG00000032897.18	Nfyc	chr4	protein_coding	nuclear transcription factor-Y gamma
chr4	120647686	120682727	-	120647686	120672659	5pMXE	0.33	50	50	ENSMUST00000120779.8	ENSMUSG00000032897.18	Nfyc	chr4	protein_coding	nuclear transcription factor-Y gamma
chr4	120647686	120688638	-	120647686	120672659	5pMXE	0.33	50	50	ENSMUST00000120779.8	ENSMUSG00000032897.18	Nfyc	chr4	protein_coding	nuclear transcription factor-Y gamma
chr4	120622569	120625290	-	120622569	120625923	A5SS	0.5	50	50	ENSMUST00000120779.8	ENSMUSG00000032897.18	Nfyc	chr4	protein_coding	nuclear transcription factor-Y gamma
chr4	120647686	120688638	-	120647686	120682727	5pMXE	0.33	50	50	ENSMUST00000043429.12	ENSMUSG00000032897.18	Nfyc	chr4	protein_coding	nuclear transcription factor-Y gamma
chr4	120630964;120636430	120636317;120647574	-	120630964	120647574	cassetteExon	0.5	100	100	ENSMUST00000134979.8	ENSMUSG00000032897.18	Nfyc	chr4	protein_coding	nuclear transcription factor-Y gamma
chr4	120630964;120638740	120638669;120647574	-	120630964	120647574	cassetteExon	0.5	100	100	ENSMUST00000134979.8	ENSMUSG00000032897.18	Nfyc	chr4	protein_coding	nuclear transcription factor-Y gamma
chr4	120630964;120636430	120636317;120647574	-	120630964;120638740	120638669;120647574	MXE	0.5	100	100	ENSMUST00000136236.8	ENSMUSG00000032897.18	Nfyc	chr4	protein_coding	nuclear transcription factor-Y gamma
chr4	120630964	120647574	-	120636430	120647574	3pMXE	0.33	50	50	ENSMUST00000145658.2	ENSMUSG00000032897.18	Nfyc	chr4	protein_coding	nuclear transcription factor-Y gamma
chr4	120719209	120729674	+	120712319	120729674	A5SS	0.5	50	50	ENSMUST00000132895.8	ENSMUSG00000032890.18	Rims3	chr4	protein_coding	regulating synaptic membrane exocytosis 3
chr4	120779872	120781708	-	120779893	120781708	A3SS	0.5	50	50	ENSMUST00000030375.9	ENSMUSG00000028629.10	Exo5	chr4	protein_coding	exonuclease 5
chr4	120791625	120792264	-	120791628	120792264	A3SS	0.5	50	50	ENSMUST00000106280.8	ENSMUSG00000064141.15	Zfp69	chr4	protein_coding	zinc finger protein 69
chr4	120804766	120804849	-	120804766	120806529	A5SS	0.5	50	50	ENSMUST00000106280.8	ENSMUSG00000064141.15	Zfp69	chr4	protein_coding	zinc finger protein 69
chr4	120944592;120946110	120946054;120952749	-	120944592	120952749	cassetteExon	0.5	100	100	ENSMUST00000058754.9	ENSMUSG00000043207.11	Zmpste24	chr4	protein_coding	zinc metallopeptidase, STE24
chr4	122730172;122737222	122737120;122737788	+	122730172	122737788	cassetteExon	0.5	100	100	ENSMUST00000030412.11	ENSMUSG00000028657.15	Ppt1	chr4	protein_coding	palmitoyl-protein thioesterase 1
chr4	122742328	122743400	+	122742328	122747384	A3SS	0.5	50	50	ENSMUST00000030412.11	ENSMUSG00000028657.15	Ppt1	chr4	protein_coding	palmitoyl-protein thioesterase 1
chr4	122766249	122779607	-	122766246	122779607	A3SS	0.5	50	50	ENSMUST00000069533.12	ENSMUSG00000028656.15	Cap1	chr4	protein_coding	CAP, adenylate cyclase-associated protein 1 (yeast)
chr4	122766246	122779626	-	122766246	122779607	A5SS	0.5	50	50	ENSMUST00000069533.12	ENSMUSG00000028656.15	Cap1	chr4	protein_coding	CAP, adenylate cyclase-associated protein 1 (yeast)
chr4	122766246	122779626	-	122766249	122779626	A3SS	0.5	50	50	ENSMUST00000106255.8	ENSMUSG00000028656.15	Cap1	chr4	protein_coding	CAP, adenylate cyclase-associated protein 1 (yeast)
chr4	122766249	122779607	-	122766249	122779626	A5SS	0.5	50	50	ENSMUST00000106255.8	ENSMUSG00000028656.15	Cap1	chr4	protein_coding	CAP, adenylate cyclase-associated protein 1 (yeast)
chr4	122842737;122843355	122843060;122843945	-	122842737	122843945	cassetteExon	0.5	100	100	ENSMUST00000152308.8	ENSMUSG00000028655.12	Mfsd2a	chr4	protein_coding	major facilitator superfamily domain containing 2A
chr4	122853191	122854734	-	122853194	122854734	A3SS	0.5	50	50	ENSMUST00000152308.8	ENSMUSG00000028655.12	Mfsd2a	chr4	protein_coding	major facilitator superfamily domain containing 2A
chr4	122853194	122853685	-	122853194	122854734	A5SS	0.5	50	50	ENSMUST00000152308.8	ENSMUSG00000028655.12	Mfsd2a	chr4	protein_coding	major facilitator superfamily domain containing 2A
chr4	122889943	122890307	+	122889604	122890307	A5SS	0.5	50	50	ENSMUST00000144998.2	ENSMUSG00000028654.14	Mycl	chr4	protein_coding	v-myc avian myelocytomatosis viral oncogene lung carcinoma derived
chr4	122892837	122893698	+	122890811	122893698	A5SS	0.33	50	50	ENSMUST00000106252.9	ENSMUSG00000028654.14	Mycl	chr4	protein_coding	v-myc avian myelocytomatosis viral oncogene lung carcinoma derived
chr4	122893188	122893698	+	122890811	122893698	A5SS	0.33	50	50	ENSMUST00000106252.9	ENSMUSG00000028654.14	Mycl	chr4	protein_coding	v-myc avian myelocytomatosis viral oncogene lung carcinoma derived
chr4	122893188	122893698	+	122892837	122893698	A5SS	0.33	50	50	ENSMUST00000135925.2	ENSMUSG00000028654.14	Mycl	chr4	protein_coding	v-myc avian myelocytomatosis viral oncogene lung carcinoma derived
chr4	122942673	122943270	+	122942673;122943057	122942945;122943270	ES	0.5	50	50	ENSMUST00000102649.4	ENSMUSG00000028653.17	Trit1	chr4	protein_coding	tRNA isopentenyltransferase 1
chr4	122943347	122946277	+	122943347;122945968	122945859;122946277	ES	0.5	50	50	ENSMUST00000102649.4	ENSMUSG00000028653.17	Trit1	chr4	protein_coding	tRNA isopentenyltransferase 1
chr4	123016850	123024215	+	123016850	123018181	3pMXE	0.5	50	50	ENSMUST00000002457.2	ENSMUSG00000002384.3	Bmp8b	chr4	protein_coding	bone morphogenetic protein 8b
chr4	123013558	123015679	+	123009087	123015679	A5SS	0.5	50	50	ENSMUST00000002457.2	ENSMUSG00000002384.3	Bmp8b	chr4	protein_coding	bone morphogenetic protein 8b
chr4	123029470	123030594	-	123029470	123030665	A5SS	0.5	50	50	ENSMUST00000030404.5	ENSMUSG00000028651.13	Ppie	chr4	protein_coding	peptidylprolyl isomerase E (cyclophilin E)
chr4	123077417	123082508	+	123077417;123077649	123077546;123082508	ES	0.33	50	50	ENSMUST00000059667.9	ENSMUSG00000046093.10	Hpcal4	chr4	protein_coding	hippocalcin-like 4
chr4	123077649;123081611	123081523;123082508	+	123077649	123082508	cassetteExon	0.5	100	100	ENSMUST00000059667.9	ENSMUSG00000046093.10	Hpcal4	chr4	protein_coding	hippocalcin-like 4
chr4	123081611	123082508	+	123077417	123082508	A5SS	0.33	50	50	ENSMUST00000106246.8	ENSMUSG00000046093.10	Hpcal4	chr4	protein_coding	hippocalcin-like 4
chr4	123077417	123082508	+	123077417	123077546	3pMXE	0.5	50	50	ENSMUST00000136619.2	ENSMUSG00000046093.10	Hpcal4	chr4	protein_coding	hippocalcin-like 4
chr4	123077417	123082508	+	123077649	123082508	5pMXE	0.33	50	50	ENSMUST00000152194.2	ENSMUSG00000046093.10	Hpcal4	chr4	protein_coding	hippocalcin-like 4
chr4	123133663	123133924	+	123127739	123133924	A5SS	0.5	50	50	ENSMUST00000040821.5	ENSMUSG00000032744.5	Heyl	chr4	protein_coding	hairy/enhancer-of-split related with YRPW motif-like
chr4	123177600	123180473	+	123157186	123180473	A5SS	0.5	50	50	ENSMUST00000156807.2	ENSMUSG00000011257.20	Pabpc4	chr4	protein_coding	poly(A) binding protein, cytoplasmic 4
chr4	123189114;123189629	123189543;123189723	+	123189114	123189723	cassetteExon	0.5	100	100	ENSMUST00000106243.8	ENSMUSG00000011257.20	Pabpc4	chr4	protein_coding	poly(A) binding protein, cytoplasmic 4
chr4	123183006	123183992	+	123182867	123183992	A5SS	0.5	50	50	ENSMUST00000106243.8	ENSMUSG00000011257.20	Pabpc4	chr4	protein_coding	poly(A) binding protein, cytoplasmic 4
chr4	123189066	123189723	+	123189114	123189723	A5SS	0.33	50	50	ENSMUST00000106243.8	ENSMUSG00000011257.20	Pabpc4	chr4	protein_coding	poly(A) binding protein, cytoplasmic 4
chr4	123189066	123189723	+	123189066;123189629	123189543;123189723	ES	0.33	50	50	ENSMUST00000106241.8	ENSMUSG00000011257.20	Pabpc4	chr4	protein_coding	poly(A) binding protein, cytoplasmic 4
chr4	123189114	123189543	+	123189066	123189543	A5SS	0.5	50	50	ENSMUST00000106241.8	ENSMUSG00000011257.20	Pabpc4	chr4	protein_coding	poly(A) binding protein, cytoplasmic 4
chr4	123189114	123189723	+	123189629	123189723	A5SS&ES	0.33	50	50	ENSMUST00000106241.8	ENSMUSG00000011257.20	Pabpc4	chr4	protein_coding	poly(A) binding protein, cytoplasmic 4
chr4	123189066	123189723	+	123189629	123189723	A5SS&ES	0.33	50	50	ENSMUST00000080178.13	ENSMUSG00000011257.20	Pabpc4	chr4	protein_coding	poly(A) binding protein, cytoplasmic 4
chr4	123207209	123209598	-	123207209	123209637	A5SS	0.5	50	50	ENSMUST00000102641.10	ENSMUSG00000032726.13	Bmp8a	chr4	protein_coding	bone morphogenetic protein 8a
chr4	123245744	123248849	-	123245744;123248373	123248272;123248849	ES	0.5	50	50	ENSMUST00000123765.8	ENSMUSG00000028649.22	Macf1	chr4	protein_coding	microtubule-actin crosslinking factor 1
chr4	123254820	123259066	-	123254820;123257867	123257850;123259066	ES	0.5	50	50	ENSMUST00000123765.8	ENSMUSG00000028649.22	Macf1	chr4	protein_coding	microtubule-actin crosslinking factor 1
chr4	123261830;123262625	123262614;123263598	-	123261830	123263598	cassetteExon	0.5	100	100	ENSMUST00000123765.8	ENSMUSG00000028649.22	Macf1	chr4	protein_coding	microtubule-actin crosslinking factor 1
chr4	123261830;123262628	123262614;123263598	-	123261830	123263598	cassetteExon	0.5	100	100	ENSMUST00000123765.8	ENSMUSG00000028649.22	Macf1	chr4	protein_coding	microtubule-actin crosslinking factor 1
chr4	123254820	123255247	-	123254820	123257850	A5SS	0.33	50	50	ENSMUST00000123765.8	ENSMUSG00000028649.22	Macf1	chr4	protein_coding	microtubule-actin crosslinking factor 1
chr4	123334584	123338628	-	123334584;123335458	123335396;123338628	ES	0.5	50	50	ENSMUST00000097897.11	ENSMUSG00000028649.22	Macf1	chr4	protein_coding	microtubule-actin crosslinking factor 1
chr4	123279479;123280350	123280342;123281021	-	123279479	123281021	cassetteExon	0.5	100	100	ENSMUST00000097897.11	ENSMUSG00000028649.22	Macf1	chr4	protein_coding	microtubule-actin crosslinking factor 1
chr4	123289790;123291213	123290887;123291541	-	123289790	123291541	cassetteExon	0.5	100	100	ENSMUST00000097897.11	ENSMUSG00000028649.22	Macf1	chr4	protein_coding	microtubule-actin crosslinking factor 1
chr4	123433666;123436380	123436285;123438535	-	123433666	123438535	cassetteExon	0.5	100	100	ENSMUST00000097897.11	ENSMUSG00000028649.22	Macf1	chr4	protein_coding	microtubule-actin crosslinking factor 1
chr4	123262628	123263598	-	123262625	123263598	A3SS	0.33	50	50	ENSMUST00000097897.11	ENSMUSG00000028649.22	Macf1	chr4	protein_coding	microtubule-actin crosslinking factor 1
chr4	123295705	123301231	-	123295705	123325791	A5SS	0.5	50	50	ENSMUST00000097897.11	ENSMUSG00000028649.22	Macf1	chr4	protein_coding	microtubule-actin crosslinking factor 1
chr4	123328988	123332266	-	123328988	123332260	A5SS	0.5	50	50	ENSMUST00000097897.11	ENSMUSG00000028649.22	Macf1	chr4	protein_coding	microtubule-actin crosslinking factor 1
chr4	123370130	123372675	-	123370130	123373980	A5SS	0.5	50	50	ENSMUST00000097897.11	ENSMUSG00000028649.22	Macf1	chr4	protein_coding	microtubule-actin crosslinking factor 1
chr4	123407794	123420257	-	123407794	123429995	A5SS	0.5	50	50	ENSMUST00000097897.11	ENSMUSG00000028649.22	Macf1	chr4	protein_coding	microtubule-actin crosslinking factor 1
chr4	123448158	123458256	-	123448158	123577763	A5SS	0.2	50	50	ENSMUST00000097897.11	ENSMUSG00000028649.22	Macf1	chr4	protein_coding	microtubule-actin crosslinking factor 1
chr4	123448158	123466410	-	123448158	123577763	A5SS	0.2	50	50	ENSMUST00000097897.11	ENSMUSG00000028649.22	Macf1	chr4	protein_coding	microtubule-actin crosslinking factor 1
chr4	123448158	123507380	-	123448158	123577763	A5SS	0.2	50	50	ENSMUST00000097897.11	ENSMUSG00000028649.22	Macf1	chr4	protein_coding	microtubule-actin crosslinking factor 1
chr4	123448158	123558259	-	123448158	123577763	A5SS	0.2	50	50	ENSMUST00000097897.11	ENSMUSG00000028649.22	Macf1	chr4	protein_coding	microtubule-actin crosslinking factor 1
chr4	123254820	123255247	-	123254820	123259066	A5SS	0.33	50	50	ENSMUST00000149022.8	ENSMUSG00000028649.22	Macf1	chr4	protein_coding	microtubule-actin crosslinking factor 1
chr4	123370130	123373980	-	123355027	123373980	A3SS	0.5	50	50	ENSMUST00000134458.8	ENSMUSG00000028649.22	Macf1	chr4	protein_coding	microtubule-actin crosslinking factor 1
chr4	123355027	123357331	-	123355027	123373980	A5SS	0.5	50	50	ENSMUST00000134458.8	ENSMUSG00000028649.22	Macf1	chr4	protein_coding	microtubule-actin crosslinking factor 1
chr4	123448158	123466410	-	123448158	123458256	5pMXE	0.2	50	50	ENSMUST00000238731.2	ENSMUSG00000028649.22	Macf1	chr4	protein_coding	microtubule-actin crosslinking factor 1
chr4	123448158	123507380	-	123448158	123458256	5pMXE	0.2	50	50	ENSMUST00000238731.2	ENSMUSG00000028649.22	Macf1	chr4	protein_coding	microtubule-actin crosslinking factor 1
chr4	123448158	123558259	-	123448158	123458256	5pMXE	0.2	50	50	ENSMUST00000238731.2	ENSMUSG00000028649.22	Macf1	chr4	protein_coding	microtubule-actin crosslinking factor 1
chr4	123448158	123507380	-	123448158	123466410	5pMXE	0.2	50	50	ENSMUST00000238555.2	ENSMUSG00000028649.22	Macf1	chr4	protein_coding	microtubule-actin crosslinking factor 1
chr4	123448158	123558259	-	123448158	123466410	5pMXE	0.2	50	50	ENSMUST00000238555.2	ENSMUSG00000028649.22	Macf1	chr4	protein_coding	microtubule-actin crosslinking factor 1
chr4	123289790	123291541	-	123291213	123291541	3pMXE	0.5	50	50	ENSMUST00000125447.3	ENSMUSG00000028649.22	Macf1	chr4	protein_coding	microtubule-actin crosslinking factor 1
chr4	123448158	123507380	-	123448158	123558259	A5SS	0.2	50	50	ENSMUST00000147030.2	ENSMUSG00000028649.22	Macf1	chr4	protein_coding	microtubule-actin crosslinking factor 1
chr4	123561540	123564712	+	123561540	123562417	3pMXE	0.5	50	50	ENSMUST00000140510.2	ENSMUSG00000087307.2	Gm12925	chr4	lncRNA	predicted gene 12925
chr4	123561540	123564712	+	123561540;123562508	123562417;123564712	ES	0.5	50	50	ENSMUST00000130791.2	ENSMUSG00000087307.2	Gm12925	chr4	lncRNA	predicted gene 12925
chr4	123609874	123611901	-	123609874	123611816	A5SS	0.33	50	50	ENSMUST00000106206.8	ENSMUSG00000028648.14	Ndufs5	chr4	protein_coding	NADH:ubiquinone oxidoreductase core subunit S5
chr4	123609874	123611906	-	123609874	123611816	A5SS	0.33	50	50	ENSMUST00000106206.8	ENSMUSG00000028648.14	Ndufs5	chr4	protein_coding	NADH:ubiquinone oxidoreductase core subunit S5
chr4	123609874	123611901	-	123609874	123611906	A5SS	0.33	50	50	ENSMUST00000030401.14	ENSMUSG00000028648.14	Ndufs5	chr4	protein_coding	NADH:ubiquinone oxidoreductase core subunit S5
chr4	123692100	123703707	+	123681764	123703707	A5SS	0.5	50	50	ENSMUST00000124290.2	ENSMUSG00000043333.13	Rhbdl2	chr4	protein_coding	rhomboid like 2
chr4	123708184	123710068	+	123708184	123711657	A3SS	0.5	50	50	ENSMUST00000053202.12	ENSMUSG00000043333.13	Rhbdl2	chr4	protein_coding	rhomboid like 2
chr4	123707529	123708036	+	123703969	123708036	A5SS	0.5	50	50	ENSMUST00000053202.12	ENSMUSG00000043333.13	Rhbdl2	chr4	protein_coding	rhomboid like 2
chr4	123813011	123813642	+	123811560	123813642	A5SS	0.5	50	50	ENSMUST00000030399.7	ENSMUSG00000028646.17	Rragc	chr4	protein_coding	Ras-related GTP binding C
chr4	123814234	123814744	+	123813845	123814744	A5SS	0.5	50	50	ENSMUST00000030399.7	ENSMUSG00000028646.17	Rragc	chr4	protein_coding	Ras-related GTP binding C
chr4	123815257	123817753	+	123814943	123817753	A5SS	0.5	50	50	ENSMUST00000030399.7	ENSMUSG00000028646.17	Rragc	chr4	protein_coding	Ras-related GTP binding C
chr4	124225627	124225996	-	124221968	124225996	A3SS	0.5	50	50	ENSMUST00000154878.2	ENSMUSG00000086978.2	4933435F18Rik	chr4	lncRNA	RIKEN cDNA 4933435F18 gene
chr4	124344472	124376828	-	124344472	124345025	5pMXE	0.5	50	50	ENSMUST00000127913.8	ENSMUSG00000084757.8	1700057H15Rik	chr4	lncRNA	RIKEN cDNA 1700057H15 gene
chr4	124344245	124344425	-	124312650	124344425	A3SS	0.33	50	50	ENSMUST00000127913.8	ENSMUSG00000084757.8	1700057H15Rik	chr4	lncRNA	RIKEN cDNA 1700057H15 gene
chr4	124344248	124344425	-	124312650	124344425	A3SS	0.33	50	50	ENSMUST00000127913.8	ENSMUSG00000084757.8	1700057H15Rik	chr4	lncRNA	RIKEN cDNA 1700057H15 gene
chr4	124344245	124344425	-	124344248	124344425	A3SS	0.33	50	50	ENSMUST00000143859.8	ENSMUSG00000084757.8	1700057H15Rik	chr4	lncRNA	RIKEN cDNA 1700057H15 gene
chr4	124599851	124601310	+	124599851;124601216	124601047;124601310	ES	0.5	50	50	ENSMUST00000106199.10	ENSMUSG00000032643.13	Fhl3	chr4	protein_coding	four and a half LIM domains 3
chr4	124601523	124601609	+	124601496	124601609	A5SS	0.5	50	50	ENSMUST00000106199.10	ENSMUSG00000032643.13	Fhl3	chr4	protein_coding	four and a half LIM domains 3
chr4	124687202;124687447	124687395;124689149	+	124687202	124689149	cassetteExon	0.5	100	100	ENSMUST00000094782.10	ENSMUSG00000028894.19	Inpp5b	chr4	protein_coding	inositol polyphosphate-5-phosphatase B
chr4	124635709	124636235	+	124635709	124636257	A3SS	0.5	50	50	ENSMUST00000094782.10	ENSMUSG00000028894.19	Inpp5b	chr4	protein_coding	inositol polyphosphate-5-phosphatase B
chr4	124663248	124671134	+	124645485	124671134	A5SS	0.33	50	50	ENSMUST00000094782.10	ENSMUSG00000028894.19	Inpp5b	chr4	protein_coding	inositol polyphosphate-5-phosphatase B
chr4	124669499	124671134	+	124645485	124671134	A5SS	0.33	50	50	ENSMUST00000094782.10	ENSMUSG00000028894.19	Inpp5b	chr4	protein_coding	inositol polyphosphate-5-phosphatase B
chr4	124663248	124671134	+	124663248;124669499	124669390;124671134	ES	0.5	50	50	ENSMUST00000145359.8	ENSMUSG00000028894.19	Inpp5b	chr4	protein_coding	inositol polyphosphate-5-phosphatase B
chr4	124696436;124697139	124697078;124698453	+	124696436	124698453	cassetteExon	0.5	100	100	ENSMUST00000106193.8	ENSMUSG00000028890.14	Mtf1	chr4	protein_coding	metal response element binding transcription factor 1
chr4	124696436	124698453	+	124697139	124698453	5pMXE	0.5	50	50	ENSMUST00000175875.2	ENSMUSG00000028890.14	Mtf1	chr4	protein_coding	metal response element binding transcription factor 1
chr4	124744226	124744315	-	124744226	124744442	A5SS	0.33	50	50	ENSMUST00000163946.2	ENSMUSG00000078570.11	1110065P20Rik	chr4	protein_coding	RIKEN cDNA 1110065P20 gene
chr4	124744226	124744373	-	124744226	124744442	A5SS	0.33	50	50	ENSMUST00000163946.2	ENSMUSG00000078570.11	1110065P20Rik	chr4	protein_coding	RIKEN cDNA 1110065P20 gene
chr4	124744226	124744373	-	124744226	124744315	A5SS	0.33	50	50	ENSMUST00000106190.10	ENSMUSG00000078570.11	1110065P20Rik	chr4	protein_coding	RIKEN cDNA 1110065P20 gene
chr4	124813151	124813406	-	124812823	124813406	A3SS	0.5	50	50	ENSMUST00000084296.10	ENSMUSG00000028873.17	Cdca8	chr4	protein_coding	cell division cycle associated 8
chr4	124830883	124830972	+	124830880	124830972	A5SS	0.5	50	50	ENSMUST00000233207.2	ENSMUSG00000044730.18	9930104L06Rik	chr4	protein_coding	RIKEN cDNA 9930104L06 gene
chr4	124832647	124834159	+	124832510	124834159	A5SS	0.5	50	50	ENSMUST00000233289.2	ENSMUSG00000044730.18	9930104L06Rik	chr4	protein_coding	RIKEN cDNA 9930104L06 gene
chr4	124836264	124836376	+	124834412	124836376	A5SS	0.5	50	50	ENSMUST00000233289.2	ENSMUSG00000044730.18	9930104L06Rik	chr4	protein_coding	RIKEN cDNA 9930104L06 gene
chr4	124960745	124961800	+	124960745	124961883	A3SS	0.5	50	50	ENSMUST00000052183.7	ENSMUSG00000050213.7	Snip1	chr4	protein_coding	Smad nuclear interacting protein 1
chr4	124996824;125001339	125001310;125002116	+	124996824	125002116	cassetteExon	0.5	100	100	ENSMUST00000154689.8	ENSMUSG00000028863.14	Meaf6	chr4	protein_coding	MYST/Esa1-associated factor 6
chr4	124996824;125001502	125001310;125002116	+	124996824	125002116	cassetteExon	0.5	100	100	ENSMUST00000154689.8	ENSMUSG00000028863.14	Meaf6	chr4	protein_coding	MYST/Esa1-associated factor 6
chr4	124996824;125001502	125001445;125002116	+	124996824	125002116	cassetteExon	0.5	100	100	ENSMUST00000154689.8	ENSMUSG00000028863.14	Meaf6	chr4	protein_coding	MYST/Esa1-associated factor 6
chr4	124996824	124997223	+	124996824	125002116	A3SS	0.2	50	50	ENSMUST00000154689.8	ENSMUSG00000028863.14	Meaf6	chr4	protein_coding	MYST/Esa1-associated factor 6
chr4	124996824	125003370	+	124996824	125002116	A3SS&ES	0.2	50	50	ENSMUST00000154689.8	ENSMUSG00000028863.14	Meaf6	chr4	protein_coding	MYST/Esa1-associated factor 6
chr4	124996824	124997223	+	124996824	125003370	A3SS	0.2	50	50	ENSMUST00000055213.11	ENSMUSG00000028863.14	Meaf6	chr4	protein_coding	MYST/Esa1-associated factor 6
chr4	124996824	125001310	+	124996824	125003370	A3SS	0.2	50	50	ENSMUST00000055213.11	ENSMUSG00000028863.14	Meaf6	chr4	protein_coding	MYST/Esa1-associated factor 6
chr4	124996824	125001445	+	124996824	125003370	A3SS	0.2	50	50	ENSMUST00000055213.11	ENSMUSG00000028863.14	Meaf6	chr4	protein_coding	MYST/Esa1-associated factor 6
chr4	124996824;125001339	125001310;125001445	+	124996824	125001445	cassetteExon	0.5	100	100	ENSMUST00000184205.8	ENSMUSG00000028863.14	Meaf6	chr4	protein_coding	MYST/Esa1-associated factor 6
chr4	124996824;125001339	125001310;125002116	+	124996824;125001502	125001445;125002116	MXE	0.5	100	100	ENSMUST00000184205.8	ENSMUSG00000028863.14	Meaf6	chr4	protein_coding	MYST/Esa1-associated factor 6
chr4	124996824	124997223	+	124996824	125001445	A3SS	0.2	50	50	ENSMUST00000184205.8	ENSMUSG00000028863.14	Meaf6	chr4	protein_coding	MYST/Esa1-associated factor 6
chr4	125001339;125001502	125001445;125002116	+	125001339	125002116	cassetteExon	0.5	100	100	ENSMUST00000106171.9	ENSMUSG00000028863.14	Meaf6	chr4	protein_coding	MYST/Esa1-associated factor 6
chr4	124996824	124997223	+	124996824	125001310	A3SS	0.25	50	50	ENSMUST00000106171.9	ENSMUSG00000028863.14	Meaf6	chr4	protein_coding	MYST/Esa1-associated factor 6
chr4	125787763;125812599	125812281;125815666	-	125787763	125815666	cassetteExon	0.5	100	100	ENSMUST00000148534.8	ENSMUSG00000085562.8	2610028E06Rik	chr4	lncRNA	RIKEN cDNA 2610028E06 gene
chr4	125787763;125812599	125812281;125815870	-	125787763;125815761	125815666;125815870	MXE	0.5	100	100	ENSMUST00000148534.8	ENSMUSG00000085562.8	2610028E06Rik	chr4	lncRNA	RIKEN cDNA 2610028E06 gene
chr4	125787763	125791949	-	125787763	125815666	A5SS	0.25	50	50	ENSMUST00000148534.8	ENSMUSG00000085562.8	2610028E06Rik	chr4	lncRNA	RIKEN cDNA 2610028E06 gene
chr4	125787763	125810747	-	125787763	125815666	A5SS	0.25	50	50	ENSMUST00000148534.8	ENSMUSG00000085562.8	2610028E06Rik	chr4	lncRNA	RIKEN cDNA 2610028E06 gene
chr4	125812599	125815870	-	125812599;125815761	125815666;125815870	ES	0.5	50	50	ENSMUST00000156350.8	ENSMUSG00000085562.8	2610028E06Rik	chr4	lncRNA	RIKEN cDNA 2610028E06 gene
chr4	125787763	125791949	-	125787763	125812281	A5SS	0.25	50	50	ENSMUST00000156350.8	ENSMUSG00000085562.8	2610028E06Rik	chr4	lncRNA	RIKEN cDNA 2610028E06 gene
chr4	125787763	125810747	-	125787763	125812281	A5SS	0.25	50	50	ENSMUST00000156350.8	ENSMUSG00000085562.8	2610028E06Rik	chr4	lncRNA	RIKEN cDNA 2610028E06 gene
chr4	125787763	125791949	-	125787763	125810747	A5SS	0.25	50	50	ENSMUST00000153589.2	ENSMUSG00000085562.8	2610028E06Rik	chr4	lncRNA	RIKEN cDNA 2610028E06 gene
chr4	125933689	125936697	+	125933689;125936543	125936453;125936697	ES	0.5	50	50	ENSMUST00000106162.8	ENSMUSG00000028859.15	Csf3r	chr4	protein_coding	colony stimulating factor 3 receptor (granulocyte)
chr4	125919972	125920982	+	125919972	125921110	A3SS	0.5	50	50	ENSMUST00000106162.8	ENSMUSG00000028859.15	Csf3r	chr4	protein_coding	colony stimulating factor 3 receptor (granulocyte)
chr4	125921193	125923556	+	125921109	125923556	A5SS	0.5	50	50	ENSMUST00000153968.2	ENSMUSG00000028859.15	Csf3r	chr4	protein_coding	colony stimulating factor 3 receptor (granulocyte)
chr4	125952585;125958772	125958743;125967598	+	125952585	125967598	cassetteExon	0.5	100	100	ENSMUST00000035497.5	ENSMUSG00000042616.9	Oscp1	chr4	protein_coding	organic solute carrier partner 1
chr4	125976778	125977205	+	125976778	125977389	A3SS	0.5	50	50	ENSMUST00000035497.5	ENSMUSG00000042616.9	Oscp1	chr4	protein_coding	organic solute carrier partner 1
chr4	125990500	125991622	+	125990602	125991622	A5SS	0.5	50	50	ENSMUST00000055575.8	ENSMUSG00000050188.9	Lsm10	chr4	protein_coding	U7 snRNP-specific Sm-like protein LSM10
chr4	125997939	126012067	+	125997939;126011543	126011257;126012067	ES	0.5	50	50	ENSMUST00000116286.9	ENSMUSG00000042608.16	Stk40	chr4	protein_coding	serine/threonine kinase 40
chr4	126023543	126026460	+	126023543	126028805	A3SS	0.5	50	50	ENSMUST00000116286.9	ENSMUSG00000042608.16	Stk40	chr4	protein_coding	serine/threonine kinase 40
chr4	126012255	126017509	+	126012133	126017509	A5SS	0.33	50	50	ENSMUST00000116286.9	ENSMUSG00000042608.16	Stk40	chr4	protein_coding	serine/threonine kinase 40
chr4	125997939;126012133	126012067;126017509	+	125997939	126017509	cassetteExon	0.5	100	100	ENSMUST00000094761.11	ENSMUSG00000042608.16	Stk40	chr4	protein_coding	serine/threonine kinase 40
chr4	125997939;126012255	126012067;126017509	+	125997939	126017509	cassetteExon	0.5	100	100	ENSMUST00000094761.11	ENSMUSG00000042608.16	Stk40	chr4	protein_coding	serine/threonine kinase 40
chr4	125997939	126011257	+	125997939	126017509	A3SS	0.33	50	50	ENSMUST00000094761.11	ENSMUSG00000042608.16	Stk40	chr4	protein_coding	serine/threonine kinase 40
chr4	125997939	126012067	+	125997939	126011257	3pMXE	0.33	50	50	ENSMUST00000127092.2	ENSMUSG00000042608.16	Stk40	chr4	protein_coding	serine/threonine kinase 40
chr4	125997939	126017509	+	126012255	126017509	5pMXE	0.33	50	50	ENSMUST00000139188.2	ENSMUSG00000042608.16	Stk40	chr4	protein_coding	serine/threonine kinase 40
chr4	126042424	126042744	+	126042424	126042677	A3SS	0.5	50	50	ENSMUST00000052876.3	ENSMUSG00000050212.5	Eva1b	chr4	protein_coding	eva-1 homolog B (C. elegans)
chr4	126055214	126055528	-	126055214;126055416	126055316;126055528	ES	0.5	50	50	ENSMUST00000094760.9	ENSMUSG00000073758.11	Sh3d21	chr4	protein_coding	SH3 domain containing 21
chr4	126055816;126056059	126055969;126056246	-	126055816	126056246	cassetteExon	0.5	100	100	ENSMUST00000094760.9	ENSMUSG00000073758.11	Sh3d21	chr4	protein_coding	SH3 domain containing 21
chr4	126055816	126056246	-	126056059	126056246	A3SS	0.5	50	50	ENSMUST00000152402.8	ENSMUSG00000073758.11	Sh3d21	chr4	protein_coding	SH3 domain containing 21
chr4	126065674;126067122	126066930;126067237	-	126065674	126067237	cassetteExon	0.5	100	100	ENSMUST00000080919.12	ENSMUSG00000043962.17	Thrap3	chr4	protein_coding	thyroid hormone receptor associated protein 3
chr4	126074607;126078935	126078724;126080228	-	126074607	126080228	cassetteExon	0.5	100	100	ENSMUST00000080919.12	ENSMUSG00000043962.17	Thrap3	chr4	protein_coding	thyroid hormone receptor associated protein 3
chr4	126080381;126088197	126088110;126096363	-	126080381	126096363	cassetteExon	0.5	100	100	ENSMUST00000080919.12	ENSMUSG00000043962.17	Thrap3	chr4	protein_coding	thyroid hormone receptor associated protein 3
chr4	126080381;126094800	126094739;126096363	-	126080381	126096363	cassetteExon	0.5	100	100	ENSMUST00000080919.12	ENSMUSG00000043962.17	Thrap3	chr4	protein_coding	thyroid hormone receptor associated protein 3
chr4	126065540	126069129	-	126067321	126069129	A3SS&ES	0.5	50	50	ENSMUST00000080919.12	ENSMUSG00000043962.17	Thrap3	chr4	protein_coding	thyroid hormone receptor associated protein 3
chr4	126072794	126073705	-	126072350	126073705	A3SS	0.5	50	50	ENSMUST00000080919.12	ENSMUSG00000043962.17	Thrap3	chr4	protein_coding	thyroid hormone receptor associated protein 3
chr4	126095421	126096363	-	126080381	126096363	A3SS	0.25	50	50	ENSMUST00000080919.12	ENSMUSG00000043962.17	Thrap3	chr4	protein_coding	thyroid hormone receptor associated protein 3
chr4	126070149	126072168	-	126070149	126071655	A5SS	0.5	50	50	ENSMUST00000080919.12	ENSMUSG00000043962.17	Thrap3	chr4	protein_coding	thyroid hormone receptor associated protein 3
chr4	126080381	126095596	-	126080381	126096363	A5SS	0.2	50	50	ENSMUST00000080919.12	ENSMUSG00000043962.17	Thrap3	chr4	protein_coding	thyroid hormone receptor associated protein 3
chr4	126080381	126095916	-	126080381	126096363	A5SS	0.2	50	50	ENSMUST00000080919.12	ENSMUSG00000043962.17	Thrap3	chr4	protein_coding	thyroid hormone receptor associated protein 3
chr4	126080381	126094739	-	126080381	126088110	5pMXE	0.2	50	50	ENSMUST00000123008.8	ENSMUSG00000043962.17	Thrap3	chr4	protein_coding	thyroid hormone receptor associated protein 3
chr4	126080381	126095596	-	126080381	126088110	5pMXE	0.2	50	50	ENSMUST00000123008.8	ENSMUSG00000043962.17	Thrap3	chr4	protein_coding	thyroid hormone receptor associated protein 3
chr4	126080381	126095916	-	126080381	126088110	5pMXE	0.2	50	50	ENSMUST00000123008.8	ENSMUSG00000043962.17	Thrap3	chr4	protein_coding	thyroid hormone receptor associated protein 3
chr4	126080381	126096363	-	126080381	126088110	5pMXE	0.2	50	50	ENSMUST00000123008.8	ENSMUSG00000043962.17	Thrap3	chr4	protein_coding	thyroid hormone receptor associated protein 3
chr4	126080381	126095596	-	126080381	126094739	5pMXE	0.2	50	50	ENSMUST00000136157.8	ENSMUSG00000043962.17	Thrap3	chr4	protein_coding	thyroid hormone receptor associated protein 3
chr4	126080381	126095916	-	126080381	126094739	5pMXE	0.2	50	50	ENSMUST00000136157.8	ENSMUSG00000043962.17	Thrap3	chr4	protein_coding	thyroid hormone receptor associated protein 3
chr4	126080381	126096363	-	126080381	126094739	5pMXE	0.2	50	50	ENSMUST00000136157.8	ENSMUSG00000043962.17	Thrap3	chr4	protein_coding	thyroid hormone receptor associated protein 3
chr4	126080381;126088197	126088110;126094739	-	126080381	126094739	cassetteExon	0.5	100	100	ENSMUST00000136157.8	ENSMUSG00000043962.17	Thrap3	chr4	protein_coding	thyroid hormone receptor associated protein 3
chr4	126088197	126096363	-	126088197;126094800	126094739;126096363	ES	0.25	50	50	ENSMUST00000169403.8	ENSMUSG00000043962.17	Thrap3	chr4	protein_coding	thyroid hormone receptor associated protein 3
chr4	126088197;126095421	126095315;126096363	-	126088197;126094800	126094739;126096363	MXE	0.5	100	100	ENSMUST00000169403.8	ENSMUSG00000043962.17	Thrap3	chr4	protein_coding	thyroid hormone receptor associated protein 3
chr4	126080381;126094800	126094739;126096363	-	126080381;126088197	126088110;126096363	MXE	0.5	100	100	ENSMUST00000168568.8	ENSMUSG00000043962.17	Thrap3	chr4	protein_coding	thyroid hormone receptor associated protein 3
chr4	126088197;126095421	126095315;126096363	-	126088197	126096363	cassetteExon	0.5	100	100	ENSMUST00000168568.8	ENSMUSG00000043962.17	Thrap3	chr4	protein_coding	thyroid hormone receptor associated protein 3
chr4	126080381;126094800	126094739;126096363	-	126080381;126095421	126088110;126096363	MXE	0.5	100	100	ENSMUST00000130334.2	ENSMUSG00000043962.17	Thrap3	chr4	protein_coding	thyroid hormone receptor associated protein 3
chr4	126080381	126095916	-	126080381	126095596	A5SS	0.2	50	50	ENSMUST00000142125.2	ENSMUSG00000043962.17	Thrap3	chr4	protein_coding	thyroid hormone receptor associated protein 3
chr4	126080381	126096363	-	126088197	126096363	3pMXE	0.25	50	50	ENSMUST00000124327.2	ENSMUSG00000043962.17	Thrap3	chr4	protein_coding	thyroid hormone receptor associated protein 3
chr4	126131071;126132425	126132315;126133816	-	126131071	126133816	cassetteExon	0.5	100	100	ENSMUST00000125981.8	ENSMUSG00000028849.18	Map7d1	chr4	protein_coding	MAP7 domain containing 1
chr4	126131071	126133825	-	126131071	126133816	A5SS	0.33	50	50	ENSMUST00000125981.8	ENSMUSG00000028849.18	Map7d1	chr4	protein_coding	MAP7 domain containing 1
chr4	126131071	126133825	-	126131071	126132315	A5SS&ES	0.33	50	50	ENSMUST00000122129.8	ENSMUSG00000028849.18	Map7d1	chr4	protein_coding	MAP7 domain containing 1
chr4	126194479	126203393	+	126190447	126203393	A5SS	0.5	50	50	ENSMUST00000070132.7	ENSMUSG00000056174.9	Col8a2	chr4	protein_coding	collagen, type VIII, alpha 2
chr4	126212288	126215235	-	126212288	126214863	5pMXE	0.33	50	50	ENSMUST00000151191.8	ENSMUSG00000042558.17	Adprs	chr4	protein_coding	ADP-ribosylserine hydrolase
chr4	126212288	126214755	-	126212288	126214863	A5SS	0.33	50	50	ENSMUST00000151191.8	ENSMUSG00000042558.17	Adprs	chr4	protein_coding	ADP-ribosylserine hydrolase
chr4	126212288	126214755	-	126212288	126215235	A5SS	0.33	50	50	ENSMUST00000102617.5	ENSMUSG00000042558.17	Adprs	chr4	protein_coding	ADP-ribosylserine hydrolase
chr4	126218996	126219090	-	126218996	126219438	A5SS	0.33	50	50	ENSMUST00000102616.8	ENSMUSG00000028845.16	Tekt2	chr4	protein_coding	tektin 2
chr4	126218996	126219376	-	126218996	126219438	A5SS	0.33	50	50	ENSMUST00000102616.8	ENSMUSG00000028845.16	Tekt2	chr4	protein_coding	tektin 2
chr4	126218996	126219090	-	126218996	126219376	A5SS	0.33	50	50	ENSMUST00000156139.8	ENSMUSG00000028845.16	Tekt2	chr4	protein_coding	tektin 2
chr4	126239375	126240424	-	126225741	126240424	A3SS	0.5	50	50	ENSMUST00000132123.8	ENSMUSG00000028842.16	Ago3	chr4	protein_coding	argonaute RISC catalytic subunit 3
chr4	126240565	126241561	-	126240623	126241561	A3SS	0.5	50	50	ENSMUST00000132123.8	ENSMUSG00000028842.16	Ago3	chr4	protein_coding	argonaute RISC catalytic subunit 3
chr4	126269733	126270700	-	126265619	126270700	A3SS	0.5	50	50	ENSMUST00000069097.13	ENSMUSG00000028842.16	Ago3	chr4	protein_coding	argonaute RISC catalytic subunit 3
chr4	126292170	126296958	-	126270834	126296958	A3SS	0.5	50	50	ENSMUST00000069097.13	ENSMUSG00000028842.16	Ago3	chr4	protein_coding	argonaute RISC catalytic subunit 3
chr4	126354378	126354699	-	126354296	126354699	A3SS	0.5	50	50	ENSMUST00000239428.2	ENSMUSG00000041530.18	Ago1	chr4	protein_coding	argonaute RISC catalytic subunit 1
chr4	126347484	126347610	-	126347484	126347619	A5SS	0.5	50	50	ENSMUST00000239428.2	ENSMUSG00000041530.18	Ago1	chr4	protein_coding	argonaute RISC catalytic subunit 1
chr4	126481478	126484977	+	126481478;126484435	126484333;126484977	ES	0.5	50	50	ENSMUST00000048391.15	ENSMUSG00000042489.16	Clspn	chr4	protein_coding	claspin
chr4	126450918	126453001	+	126450930	126453001	A5SS	0.5	50	50	ENSMUST00000048391.15	ENSMUSG00000042489.16	Clspn	chr4	protein_coding	claspin
chr4	126455697	126457700	+	126455712	126457700	A5SS	0.5	50	50	ENSMUST00000048391.15	ENSMUSG00000042489.16	Clspn	chr4	protein_coding	claspin
chr4	126467140	126468434	+	126467101	126468434	A5SS	0.5	50	50	ENSMUST00000048391.15	ENSMUSG00000042489.16	Clspn	chr4	protein_coding	claspin
chr4	126503805	126505469	+	126503805	126505474	A3SS	0.5	50	50	ENSMUST00000097886.4	ENSMUSG00000073755.5	5730409E04Rik	chr4	protein_coding	RIKEN cDNA 5730409E04Rik gene
chr4	126645874	126647118	-	126645874	126646764	A5SS	0.5	50	50	ENSMUST00000030637.14	ENSMUSG00000028833.14	Ncdn	chr4	protein_coding	neurochondrin
chr4	126645874	126647118	-	126645874;126646833	126646764;126647118	ES	0.5	50	50	ENSMUST00000106116.2	ENSMUSG00000028833.14	Ncdn	chr4	protein_coding	neurochondrin
chr4	126650861	126682074	+	126650861	126685568	A3SS	0.5	50	50	ENSMUST00000148935.8	ENSMUSG00000028830.15	AU040320	chr4	protein_coding	expressed sequence AU040320
chr4	126647455	126650692	+	126647396	126650692	A5SS	0.2	50	50	ENSMUST00000148935.8	ENSMUSG00000028830.15	AU040320	chr4	protein_coding	expressed sequence AU040320
chr4	126647560	126650692	+	126647396	126650692	A5SS	0.2	50	50	ENSMUST00000148935.8	ENSMUSG00000028830.15	AU040320	chr4	protein_coding	expressed sequence AU040320
chr4	126647638	126650692	+	126647396	126650692	A5SS	0.2	50	50	ENSMUST00000148935.8	ENSMUSG00000028830.15	AU040320	chr4	protein_coding	expressed sequence AU040320
chr4	126647788	126650692	+	126647396	126650692	A5SS	0.2	50	50	ENSMUST00000148935.8	ENSMUSG00000028830.15	AU040320	chr4	protein_coding	expressed sequence AU040320
chr4	126647455	126650692	+	126647560	126650692	A5SS	0.2	50	50	ENSMUST00000154640.8	ENSMUSG00000028830.15	AU040320	chr4	protein_coding	expressed sequence AU040320
chr4	126647638	126650692	+	126647560	126650692	A5SS	0.2	50	50	ENSMUST00000154640.8	ENSMUSG00000028830.15	AU040320	chr4	protein_coding	expressed sequence AU040320
chr4	126647788	126650692	+	126647560	126650692	A5SS	0.2	50	50	ENSMUST00000154640.8	ENSMUSG00000028830.15	AU040320	chr4	protein_coding	expressed sequence AU040320
chr4	126647638	126650692	+	126647455	126650692	A5SS	0.2	50	50	ENSMUST00000102608.10	ENSMUSG00000028830.15	AU040320	chr4	protein_coding	expressed sequence AU040320
chr4	126647788	126650692	+	126647455	126650692	A5SS	0.2	50	50	ENSMUST00000102608.10	ENSMUSG00000028830.15	AU040320	chr4	protein_coding	expressed sequence AU040320
chr4	126745811	126746959	+	126742695	126746959	A5SS	0.5	50	50	ENSMUST00000102608.10	ENSMUSG00000028830.15	AU040320	chr4	protein_coding	expressed sequence AU040320
chr4	126647788	126648242	+	126647788	126650692	A3SS	0.5	50	50	ENSMUST00000047431.11	ENSMUSG00000028830.15	AU040320	chr4	protein_coding	expressed sequence AU040320
chr4	126647638	126650692	+	126647788	126650692	A5SS	0.2	50	50	ENSMUST00000047431.11	ENSMUSG00000028830.15	AU040320	chr4	protein_coding	expressed sequence AU040320
chr4	126799940;126800429	126800314;126804583	-	126799940	126804583	cassetteExon	0.5	100	100	ENSMUST00000135003.2	ENSMUSG00000042446.17	Zmym4	chr4	protein_coding	zinc finger, MYM-type 4
chr4	126801029	126804583	-	126799940	126804583	A3SS	0.33	50	50	ENSMUST00000135003.2	ENSMUSG00000042446.17	Zmym4	chr4	protein_coding	zinc finger, MYM-type 4
chr4	126800429	126804583	-	126800429;126801029	126800879;126804583	ES	0.33	50	50	ENSMUST00000106108.9	ENSMUSG00000042446.17	Zmym4	chr4	protein_coding	zinc finger, MYM-type 4
chr4	126819816	126861609	-	126819816;126842272	126842227;126861609	ES	0.5	50	50	ENSMUST00000106108.9	ENSMUSG00000042446.17	Zmym4	chr4	protein_coding	zinc finger, MYM-type 4
chr4	126827113	126842227	-	126819816	126842227	A3SS	0.5	50	50	ENSMUST00000106108.9	ENSMUSG00000042446.17	Zmym4	chr4	protein_coding	zinc finger, MYM-type 4
chr4	126819816	126861609	-	126842272	126861609	A3SS&ES	0.5	50	50	ENSMUST00000123597.2	ENSMUSG00000042446.17	Zmym4	chr4	protein_coding	zinc finger, MYM-type 4
chr4	126921311	126929601	+	126921311	126923620	3pMXE	0.5	50	50	ENSMUST00000030623.8	ENSMUSG00000028820.14	Sfpq	chr4	protein_coding	splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
chr4	126917361	126917443	+	126917361	126917467	A3SS	0.5	50	50	ENSMUST00000030623.8	ENSMUSG00000028820.14	Sfpq	chr4	protein_coding	splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
chr4	126930442	126941483	+	126930442	126930725	3pMXE	0.5	50	50	ENSMUST00000146285.8	ENSMUSG00000028820.14	Sfpq	chr4	protein_coding	splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
chr4	126927638	126929601	+	126921311	126929601	A5SS	0.5	50	50	ENSMUST00000146285.8	ENSMUSG00000028820.14	Sfpq	chr4	protein_coding	splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
chr4	126945218;126947822	126947769;126948001	-	126945218	126948001	cassetteExon	0.5	100	100	ENSMUST00000106102.9	ENSMUSG00000043872.15	Zmym1	chr4	protein_coding	zinc finger, MYM domain containing 1
chr4	126943405	126944357	-	126943699	126944357	A3SS	0.5	50	50	ENSMUST00000106102.9	ENSMUSG00000043872.15	Zmym1	chr4	protein_coding	zinc finger, MYM domain containing 1
chr4	126948175	126951194	-	126948175	126952586	A5SS	0.5	50	50	ENSMUST00000106102.9	ENSMUSG00000043872.15	Zmym1	chr4	protein_coding	zinc finger, MYM domain containing 1
chr4	126953452	126954704	-	126953452	126954789	A5SS	0.5	50	50	ENSMUST00000106102.9	ENSMUSG00000043872.15	Zmym1	chr4	protein_coding	zinc finger, MYM domain containing 1
chr4	126953452	126954789	-	126945218	126954789	A3SS	0.5	50	50	ENSMUST00000152607.8	ENSMUSG00000043872.15	Zmym1	chr4	protein_coding	zinc finger, MYM domain containing 1
chr4	126945218	126947769	-	126945218	126954789	A5SS	0.33	50	50	ENSMUST00000152607.8	ENSMUSG00000043872.15	Zmym1	chr4	protein_coding	zinc finger, MYM domain containing 1
chr4	126945218	126948001	-	126945218	126954789	A5SS	0.33	50	50	ENSMUST00000152607.8	ENSMUSG00000043872.15	Zmym1	chr4	protein_coding	zinc finger, MYM domain containing 1
chr4	126995757	126998064	+	126995757;126997480	126997205;126998064	ES	0.5	50	50	ENSMUST00000046751.13	ENSMUSG00000042408.14	Zmym6	chr4	protein_coding	zinc finger, MYM-type 6
chr4	126998214	127000369	+	126998214;126999239	126999067;127000369	ES	0.5	50	50	ENSMUST00000046751.13	ENSMUSG00000042408.14	Zmym6	chr4	protein_coding	zinc finger, MYM-type 6
chr4	126982129	126986705	+	126982347	126986705	A5SS	0.5	50	50	ENSMUST00000046751.13	ENSMUSG00000042408.14	Zmym6	chr4	protein_coding	zinc finger, MYM-type 6
chr4	126998214	127000369	+	126998214	126999067	A3SS	0.5	50	50	ENSMUST00000125160.2	ENSMUSG00000042408.14	Zmym6	chr4	protein_coding	zinc finger, MYM-type 6
chr4	127019986	127021612	+	127018273	127021612	A5SS	0.5	50	50	ENSMUST00000106097.9	ENSMUSG00000070737.11	Tmem35b	chr4	protein_coding	transmembrane protein 35B
chr4	127128852	127129211	+	127128852	127129178	A3SS	0.5	50	50	ENSMUST00000046659.14	ENSMUSG00000042388.15	Dlgap3	chr4	protein_coding	DLG associated protein 3
chr4	127067157	127086868	+	127063158	127086868	A5SS	0.5	50	50	ENSMUST00000046659.14	ENSMUSG00000042388.15	Dlgap3	chr4	protein_coding	DLG associated protein 3
chr4	127097250	127108099	+	127094129	127108099	A5SS	0.5	50	50	ENSMUST00000046659.14	ENSMUSG00000042388.15	Dlgap3	chr4	protein_coding	DLG associated protein 3
chr4	127220564	127224295	-	127220564	127222869	5pMXE	0.5	50	50	ENSMUST00000106091.9	ENSMUSG00000042367.13	Gjb3	chr4	protein_coding	gap junction protein, beta 3
chr4	127246274	127247826	-	127246275	127247826	A3SS	0.5	50	50	ENSMUST00000106090.8	ENSMUSG00000046623.9	Gjb4	chr4	protein_coding	gap junction protein, beta 4
chr4	127368743	127380020	+	127368743	127370426	3pMXE	0.33	50	50	ENSMUST00000129084.8	ENSMUSG00000087470.3	A630031M04Rik	chr4	lncRNA	RIKEN cDNA A630031M04 gene
chr4	127368743;127369097	127368956;127370426	+	127368743	127370426	cassetteExon	0.5	100	100	ENSMUST00000129084.8	ENSMUSG00000087470.3	A630031M04Rik	chr4	lncRNA	RIKEN cDNA A630031M04 gene
chr4	127368743;127369097	127368956;127424257	+	127368743;127380115	127380020;127424257	MXE	0.5	100	100	ENSMUST00000239342.2	ENSMUSG00000087470.3	A630031M04Rik	chr4	lncRNA	RIKEN cDNA A630031M04 gene
chr4	127416376	127424257	+	127380115	127424257	A5SS	0.33	50	50	ENSMUST00000239342.2	ENSMUSG00000087470.3	A630031M04Rik	chr4	lncRNA	RIKEN cDNA A630031M04 gene
chr4	127455007	127457587	+	127455007	127455093	3pMXE	0.5	50	50	ENSMUST00000239205.2	ENSMUSG00000087470.3	A630031M04Rik	chr4	lncRNA	RIKEN cDNA A630031M04 gene
chr4	127368743	127370426	+	127368743	127368956	A3SS&ES	0.33	50	50	ENSMUST00000239205.2	ENSMUSG00000087470.3	A630031M04Rik	chr4	lncRNA	RIKEN cDNA A630031M04 gene
chr4	127369097	127370426	+	127369097	127424257	A3SS	0.5	50	50	ENSMUST00000239205.2	ENSMUSG00000087470.3	A630031M04Rik	chr4	lncRNA	RIKEN cDNA A630031M04 gene
chr4	127424443	127425237	+	127424443	127441920	A3SS	0.5	50	50	ENSMUST00000239205.2	ENSMUSG00000087470.3	A630031M04Rik	chr4	lncRNA	RIKEN cDNA A630031M04 gene
chr4	127416376	127424257	+	127369097	127424257	A5SS	0.33	50	50	ENSMUST00000239205.2	ENSMUSG00000087470.3	A630031M04Rik	chr4	lncRNA	RIKEN cDNA A630031M04 gene
chr4	127439076	127454829	+	127442024	127454829	A5SS&ES	0.5	50	50	ENSMUST00000239205.2	ENSMUSG00000087470.3	A630031M04Rik	chr4	lncRNA	RIKEN cDNA A630031M04 gene
chr4	127368743	127370426	+	127369097	127370426	A5SS	0.5	50	50	ENSMUST00000143070.2	ENSMUSG00000087470.3	A630031M04Rik	chr4	lncRNA	RIKEN cDNA A630031M04 gene
chr4	128288883	128294094	+	128288875	128294094	A5SS	0.5	50	50	ENSMUST00000144298.2	ENSMUSG00000028804.21	Csmd2	chr4	protein_coding	CUB and Sushi multiple domains 2
chr4	128391140	128392859	+	128391140	128402353	A3SS	0.5	50	50	ENSMUST00000184063.3	ENSMUSG00000028804.21	Csmd2	chr4	protein_coding	CUB and Sushi multiple domains 2
chr4	128446547	128448648	+	128446547	128448651	A3SS	0.5	50	50	ENSMUST00000184063.3	ENSMUSG00000028804.21	Csmd2	chr4	protein_coding	CUB and Sushi multiple domains 2
chr4	128371020	128371151	+	128369606	128371151	A5SS	0.5	50	50	ENSMUST00000184063.3	ENSMUSG00000028804.21	Csmd2	chr4	protein_coding	CUB and Sushi multiple domains 2
chr4	128441895	128442521	+	128440507	128442521	A5SS	0.5	50	50	ENSMUST00000184063.3	ENSMUSG00000028804.21	Csmd2	chr4	protein_coding	CUB and Sushi multiple domains 2
chr4	128483653	128485266	-	128483934	128485266	A3SS	0.5	50	50	ENSMUST00000097877.9	ENSMUSG00000061894.16	Zscan20	chr4	protein_coding	zinc finger and SCAN domains 20
chr4	128498505	128502823	-	128498505	128503787	A5SS	0.25	50	50	ENSMUST00000097877.9	ENSMUSG00000061894.16	Zscan20	chr4	protein_coding	zinc finger and SCAN domains 20
chr4	128498505	128503691	-	128498505	128503787	A5SS	0.25	50	50	ENSMUST00000097877.9	ENSMUSG00000061894.16	Zscan20	chr4	protein_coding	zinc finger and SCAN domains 20
chr4	128498505	128503803	-	128498505	128503787	A5SS	0.25	50	50	ENSMUST00000097877.9	ENSMUSG00000061894.16	Zscan20	chr4	protein_coding	zinc finger and SCAN domains 20
chr4	128498505	128502823	-	128498505	128503803	A5SS	0.25	50	50	ENSMUST00000135309.2	ENSMUSG00000061894.16	Zscan20	chr4	protein_coding	zinc finger and SCAN domains 20
chr4	128498505	128503691	-	128498505	128503803	A5SS	0.25	50	50	ENSMUST00000135309.2	ENSMUSG00000061894.16	Zscan20	chr4	protein_coding	zinc finger and SCAN domains 20
chr4	128498505;128502955	128502823;128503691	-	128498505	128503691	cassetteExon	0.5	100	100	ENSMUST00000147876.2	ENSMUSG00000061894.16	Zscan20	chr4	protein_coding	zinc finger and SCAN domains 20
chr4	128641035	128641826	+	128641035	128641801	A3SS	0.5	50	50	ENSMUST00000030588.13	ENSMUSG00000028796.18	Phc2	chr4	protein_coding	polyhomeotic 2
chr4	128582638	128598791	+	128548609	128598791	A5SS	0.5	50	50	ENSMUST00000030588.13	ENSMUSG00000028796.18	Phc2	chr4	protein_coding	polyhomeotic 2
chr4	128621663	128637147	+	128617506	128637147	A5SS	0.2	50	50	ENSMUST00000030588.13	ENSMUSG00000028796.18	Phc2	chr4	protein_coding	polyhomeotic 2
chr4	128621914	128637147	+	128617506	128637147	A5SS	0.2	50	50	ENSMUST00000030588.13	ENSMUSG00000028796.18	Phc2	chr4	protein_coding	polyhomeotic 2
chr4	128621992	128637147	+	128617506	128637147	A5SS	0.2	50	50	ENSMUST00000030588.13	ENSMUSG00000028796.18	Phc2	chr4	protein_coding	polyhomeotic 2
chr4	128635877	128637147	+	128617506	128637147	A5SS	0.2	50	50	ENSMUST00000030588.13	ENSMUSG00000028796.18	Phc2	chr4	protein_coding	polyhomeotic 2
chr4	128637254	128638795	+	128637349	128638795	A5SS	0.5	50	50	ENSMUST00000030588.13	ENSMUSG00000028796.18	Phc2	chr4	protein_coding	polyhomeotic 2
chr4	128621663	128621880	+	128621663	128637149	A3SS	0.33	50	50	ENSMUST00000143632.8	ENSMUSG00000028796.18	Phc2	chr4	protein_coding	polyhomeotic 2
chr4	128621663	128637147	+	128621663	128637149	A3SS	0.33	50	50	ENSMUST00000143632.8	ENSMUSG00000028796.18	Phc2	chr4	protein_coding	polyhomeotic 2
chr4	128621663;128621914	128621880;128637147	+	128621663	128637147	cassetteExon	0.5	100	100	ENSMUST00000106079.10	ENSMUSG00000028796.18	Phc2	chr4	protein_coding	polyhomeotic 2
chr4	128621663;128621992	128621880;128637147	+	128621663	128637147	cassetteExon	0.5	100	100	ENSMUST00000106079.10	ENSMUSG00000028796.18	Phc2	chr4	protein_coding	polyhomeotic 2
chr4	128635877	128637147	+	128621663	128637147	A5SS	0.2	50	50	ENSMUST00000106079.10	ENSMUSG00000028796.18	Phc2	chr4	protein_coding	polyhomeotic 2
chr4	128621914	128637147	+	128621992	128637147	A5SS	0.25	50	50	ENSMUST00000133439.8	ENSMUSG00000028796.18	Phc2	chr4	protein_coding	polyhomeotic 2
chr4	128635877	128637147	+	128621992	128637147	A5SS	0.25	50	50	ENSMUST00000133439.8	ENSMUSG00000028796.18	Phc2	chr4	protein_coding	polyhomeotic 2
chr4	128621663	128637147	+	128621992	128637147	5pMXE	0.2	50	50	ENSMUST00000147572.8	ENSMUSG00000028796.18	Phc2	chr4	protein_coding	polyhomeotic 2
chr4	128621914	128637147	+	128621914;128635877	128635709;128637147	ES	0.33	50	50	ENSMUST00000120946.2	ENSMUSG00000028796.18	Phc2	chr4	protein_coding	polyhomeotic 2
chr4	128621663	128637147	+	128621914	128637147	5pMXE	0.2	50	50	ENSMUST00000134421.2	ENSMUSG00000028796.18	Phc2	chr4	protein_coding	polyhomeotic 2
chr4	128653814	128655212	+	128649354	128655212	A5SS	0.5	50	50	ENSMUST00000106077.8	ENSMUSG00000028794.14	A3galt2	chr4	protein_coding	alpha 1,3-galactosyltransferase 2 (isoglobotriaosylceramide synthase)
chr4	128684106	128699805	-	128684106;128688769	128688644;128699805	ES	0.5	50	50	ENSMUST00000106072.9	ENSMUSG00000028799.16	Zfp362	chr4	protein_coding	zinc finger protein 362
chr4	128683353	128683657	-	128681013	128683657	A3SS	0.5	50	50	ENSMUST00000106072.9	ENSMUSG00000028799.16	Zfp362	chr4	protein_coding	zinc finger protein 362
chr4	128684106	128699805	-	128684106	128688644	5pMXE	0.5	50	50	ENSMUST00000071108.14	ENSMUSG00000028799.16	Zfp362	chr4	protein_coding	zinc finger protein 362
chr4	128778370	128778975	+	128778370	128790613	A3SS	0.5	50	50	ENSMUST00000035667.9	ENSMUSG00000041000.9	Trim62	chr4	protein_coding	tripartite motif-containing 62
chr4	128780579	128790613	+	128778370	128790613	A5SS	0.5	50	50	ENSMUST00000035667.9	ENSMUSG00000041000.9	Trim62	chr4	protein_coding	tripartite motif-containing 62
chr4	128844565;128855352	128855156;128855877	-	128844565	128855877	cassetteExon	0.5	100	100	ENSMUST00000119354.8	ENSMUSG00000028789.17	Azin2	chr4	protein_coding	antizyme inhibitor 2
chr4	128826284	128828250	-	128824743	128828250	A3SS	0.5	50	50	ENSMUST00000119354.8	ENSMUSG00000028789.17	Azin2	chr4	protein_coding	antizyme inhibitor 2
chr4	128855994	128856094	-	128855997	128856094	A3SS	0.5	50	50	ENSMUST00000119354.8	ENSMUSG00000028789.17	Azin2	chr4	protein_coding	antizyme inhibitor 2
chr4	128844565	128853577	-	128844565	128855877	A5SS	0.33	50	50	ENSMUST00000119354.8	ENSMUSG00000028789.17	Azin2	chr4	protein_coding	antizyme inhibitor 2
chr4	128844565	128855156	-	128844565;128853750	128853577;128855156	ES	0.5	50	50	ENSMUST00000106068.8	ENSMUSG00000028789.17	Azin2	chr4	protein_coding	antizyme inhibitor 2
chr4	128844565	128855877	-	128844565	128855156	5pMXE	0.33	50	50	ENSMUST00000147731.2	ENSMUSG00000028789.17	Azin2	chr4	protein_coding	antizyme inhibitor 2
chr4	128844565	128855877	-	128855352	128855877	3pMXE	0.5	50	50	ENSMUST00000156739.2	ENSMUSG00000028789.17	Azin2	chr4	protein_coding	antizyme inhibitor 2
chr4	128893052;128895352	128895289;128895944	+	128893052	128895944	cassetteExon	0.5	100	100	ENSMUST00000141982.2	ENSMUSG00000028792.15	Ak2	chr4	protein_coding	adenylate kinase 2
chr4	128887229	128892927	+	128885873	128892927	A5SS	0.5	50	50	ENSMUST00000141982.2	ENSMUSG00000028792.15	Ak2	chr4	protein_coding	adenylate kinase 2
chr4	128965735	128967292	+	128965735	128967295	A3SS	0.5	50	50	ENSMUST00000168461.8	ENSMUSG00000028793.16	Rnf19b	chr4	protein_coding	ring finger protein 19B
chr4	128977581	128979343	+	128978012	128979343	A5SS	0.5	50	50	ENSMUST00000030584.11	ENSMUSG00000028793.16	Rnf19b	chr4	protein_coding	ring finger protein 19B
chr4	129002197	129004323	+	129002197;129004227	129004168;129004323	ES	0.5	50	50	ENSMUST00000106064.10	ENSMUSG00000028786.16	Tmem54	chr4	protein_coding	transmembrane protein 54
chr4	129004740	129005032	+	129004740	129005116	A3SS	0.5	50	50	ENSMUST00000106064.10	ENSMUSG00000028786.16	Tmem54	chr4	protein_coding	transmembrane protein 54
chr4	129000733	129002004	+	128999524	129002004	A5SS	0.5	50	50	ENSMUST00000106064.10	ENSMUSG00000028786.16	Tmem54	chr4	protein_coding	transmembrane protein 54
chr4	129012555	129015363	-	129012555;129015100	129015015;129015363	ES	0.33	50	50	ENSMUST00000116444.10	ENSMUSG00000028785.14	Hpca	chr4	protein_coding	hippocalcin
chr4	129015100	129015628	-	129015100;129015460	129015363;129015628	ES	0.33	50	50	ENSMUST00000116444.10	ENSMUSG00000028785.14	Hpca	chr4	protein_coding	hippocalcin
chr4	129012555;129013993	129013943;129015363	-	129012555;129015100	129015015;129015363	MXE	0.5	100	100	ENSMUST00000116444.10	ENSMUSG00000028785.14	Hpca	chr4	protein_coding	hippocalcin
chr4	129012555	129015363	-	129012555	129015015	5pMXE	0.25	50	50	ENSMUST00000030572.10	ENSMUSG00000028785.14	Hpca	chr4	protein_coding	hippocalcin
chr4	129012555	129015628	-	129012555	129015015	5pMXE	0.25	50	50	ENSMUST00000030572.10	ENSMUSG00000028785.14	Hpca	chr4	protein_coding	hippocalcin
chr4	129012555	129013943	-	129012555	129015015	A5SS	0.25	50	50	ENSMUST00000030572.10	ENSMUSG00000028785.14	Hpca	chr4	protein_coding	hippocalcin
chr4	129012555	129015628	-	129012555	129015363	5pMXE	0.25	50	50	ENSMUST00000164649.8	ENSMUSG00000028785.14	Hpca	chr4	protein_coding	hippocalcin
chr4	129012555;129013993	129013943;129015363	-	129012555	129015363	cassetteExon	0.5	100	100	ENSMUST00000164649.8	ENSMUSG00000028785.14	Hpca	chr4	protein_coding	hippocalcin
chr4	129012555	129015363	-	129012555	129013943	5pMXE	0.25	50	50	ENSMUST00000116442.9	ENSMUSG00000028785.14	Hpca	chr4	protein_coding	hippocalcin
chr4	129012555	129015628	-	129012555	129013943	5pMXE	0.25	50	50	ENSMUST00000116442.9	ENSMUSG00000028785.14	Hpca	chr4	protein_coding	hippocalcin
chr4	129012555;129015100	129015015;129015628	-	129012555	129015628	cassetteExon	0.5	100	100	ENSMUST00000139450.8	ENSMUSG00000028785.14	Hpca	chr4	protein_coding	hippocalcin
chr4	129012555;129015460	129015015;129015628	-	129012555	129015628	cassetteExon	0.5	100	100	ENSMUST00000139450.8	ENSMUSG00000028785.14	Hpca	chr4	protein_coding	hippocalcin
chr4	129012555;129015460	129015363;129015628	-	129012555	129015628	cassetteExon	0.5	100	100	ENSMUST00000139450.8	ENSMUSG00000028785.14	Hpca	chr4	protein_coding	hippocalcin
chr4	129012555;129015460	129015363;129015628	-	129012555;129015100	129015015;129015628	MXE	0.5	100	100	ENSMUST00000125931.9	ENSMUSG00000028785.14	Hpca	chr4	protein_coding	hippocalcin
chr4	129076325	129083165	-	129076325;129077510	129077394;129083165	ES	0.33	50	50	ENSMUST00000106061.9	ENSMUSG00000040928.16	S100pbp	chr4	protein_coding	S100P binding protein
chr4	129058651	129072034	-	129049302	129072034	A3SS	0.33	50	50	ENSMUST00000106061.9	ENSMUSG00000040928.16	S100pbp	chr4	protein_coding	S100P binding protein
chr4	129062647	129072034	-	129049302	129072034	A3SS	0.33	50	50	ENSMUST00000106061.9	ENSMUSG00000040928.16	S100pbp	chr4	protein_coding	S100P binding protein
chr4	129075893	129083165	-	129077510	129083165	A3SS&ES	0.33	50	50	ENSMUST00000106061.9	ENSMUSG00000040928.16	S100pbp	chr4	protein_coding	S100P binding protein
chr4	129077510	129083335	-	129077510	129083165	A5SS	0.5	50	50	ENSMUST00000106061.9	ENSMUSG00000040928.16	S100pbp	chr4	protein_coding	S100P binding protein
chr4	129076325	129083335	-	129076325;129077510	129077394;129083335	ES	0.25	50	50	ENSMUST00000072431.13	ENSMUSG00000040928.16	S100pbp	chr4	protein_coding	S100P binding protein
chr4	129075893	129076125	-	129075893	129076002	A5SS	0.25	50	50	ENSMUST00000072431.13	ENSMUSG00000040928.16	S100pbp	chr4	protein_coding	S100P binding protein
chr4	129075893	129083165	-	129075893	129076002	A5SS&ES	0.25	50	50	ENSMUST00000072431.13	ENSMUSG00000040928.16	S100pbp	chr4	protein_coding	S100P binding protein
chr4	129076325	129083165	-	129076325	129077394	A5SS&ES	0.33	50	50	ENSMUST00000072431.13	ENSMUSG00000040928.16	S100pbp	chr4	protein_coding	S100P binding protein
chr4	129075893	129083165	-	129075893	129076125	A5SS&ES	0.25	50	50	ENSMUST00000106059.8	ENSMUSG00000040928.16	S100pbp	chr4	protein_coding	S100P binding protein
chr4	129075893	129083335	-	129049302	129083335	A3SS	0.25	50	50	ENSMUST00000148920.8	ENSMUSG00000040928.16	S100pbp	chr4	protein_coding	S100P binding protein
chr4	129076325	129083335	-	129049302	129083335	A3SS	0.25	50	50	ENSMUST00000148920.8	ENSMUSG00000040928.16	S100pbp	chr4	protein_coding	S100P binding protein
chr4	129077510	129083335	-	129049302	129083335	A3SS	0.25	50	50	ENSMUST00000148920.8	ENSMUSG00000040928.16	S100pbp	chr4	protein_coding	S100P binding protein
chr4	129049302	129072034	-	129049302	129083335	A5SS	0.5	50	50	ENSMUST00000148920.8	ENSMUSG00000040928.16	S100pbp	chr4	protein_coding	S100P binding protein
chr4	129075893	129083335	-	129075893;129076325	129076002;129083335	ES	0.25	50	50	ENSMUST00000151971.8	ENSMUSG00000040928.16	S100pbp	chr4	protein_coding	S100P binding protein
chr4	129076325	129083165	-	129076325	129083335	A5SS	0.33	50	50	ENSMUST00000151971.8	ENSMUSG00000040928.16	S100pbp	chr4	protein_coding	S100P binding protein
chr4	129075893	129083165	-	129076325	129083165	A3SS	0.33	50	50	ENSMUST00000117965.8	ENSMUSG00000040928.16	S100pbp	chr4	protein_coding	S100P binding protein
chr4	129075893	129083335	-	129076325	129083335	A3SS	0.25	50	50	ENSMUST00000117497.8	ENSMUSG00000040928.16	S100pbp	chr4	protein_coding	S100P binding protein
chr4	129062647	129072034	-	129058651	129072034	A3SS	0.33	50	50	ENSMUST00000137992.8	ENSMUSG00000040928.16	S100pbp	chr4	protein_coding	S100P binding protein
chr4	129075893	129083335	-	129077510	129083335	A3SS&ES	0.33	50	50	ENSMUST00000137992.8	ENSMUSG00000040928.16	S100pbp	chr4	protein_coding	S100P binding protein
chr4	129075893;129076325	129076125;129083335	-	129075893	129083335	cassetteExon	0.5	100	100	ENSMUST00000126748.8	ENSMUSG00000040928.16	S100pbp	chr4	protein_coding	S100P binding protein
chr4	129075893	129083165	-	129075893	129083335	A5SS	0.25	50	50	ENSMUST00000126748.8	ENSMUSG00000040928.16	S100pbp	chr4	protein_coding	S100P binding protein
chr4	129075893;129076325	129076002;129083165	-	129075893	129083165	cassetteExon	0.5	100	100	ENSMUST00000142490.2	ENSMUSG00000040928.16	S100pbp	chr4	protein_coding	S100P binding protein
chr4	129075893;129076325	129076125;129083165	-	129075893	129083165	cassetteExon	0.5	100	100	ENSMUST00000142490.2	ENSMUSG00000040928.16	S100pbp	chr4	protein_coding	S100P binding protein
chr4	129091081;129093947	129093814;129094519	+	129091081	129094519	cassetteExon	0.5	100	100	ENSMUST00000106054.4	ENSMUSG00000028811.13	Yars	chr4	protein_coding	tyrosyl-tRNA synthetase
chr4	129101826	129102241	+	129101826	129103445	A3SS	0.5	50	50	ENSMUST00000106054.4	ENSMUSG00000028811.13	Yars	chr4	protein_coding	tyrosyl-tRNA synthetase
chr4	129106606	129107742	+	129104371	129107742	A5SS	0.5	50	50	ENSMUST00000106054.4	ENSMUSG00000028811.13	Yars	chr4	protein_coding	tyrosyl-tRNA synthetase
chr4	129119806	129132799	-	129119806	129121520	5pMXE	0.2	50	50	ENSMUST00000106051.8	ENSMUSG00000050390.13	C77080	chr4	protein_coding	expressed sequence C77080
chr4	129119806	129141914	-	129119806	129121520	5pMXE	0.2	50	50	ENSMUST00000106051.8	ENSMUSG00000050390.13	C77080	chr4	protein_coding	expressed sequence C77080
chr4	129119806	129155124	-	129119806	129121520	5pMXE	0.2	50	50	ENSMUST00000106051.8	ENSMUSG00000050390.13	C77080	chr4	protein_coding	expressed sequence C77080
chr4	129119806	129121119	-	129119806	129121520	A5SS	0.2	50	50	ENSMUST00000106051.8	ENSMUSG00000050390.13	C77080	chr4	protein_coding	expressed sequence C77080
chr4	129119806	129141914	-	129119806	129132799	5pMXE	0.2	50	50	ENSMUST00000097873.10	ENSMUSG00000050390.13	C77080	chr4	protein_coding	expressed sequence C77080
chr4	129119806	129155124	-	129119806	129132799	5pMXE	0.2	50	50	ENSMUST00000097873.10	ENSMUSG00000050390.13	C77080	chr4	protein_coding	expressed sequence C77080
chr4	129119806	129121119	-	129119806	129132799	A5SS	0.2	50	50	ENSMUST00000097873.10	ENSMUSG00000050390.13	C77080	chr4	protein_coding	expressed sequence C77080
chr4	129119806	129155124	-	129119806	129141914	5pMXE	0.2	50	50	ENSMUST00000052602.6	ENSMUSG00000050390.13	C77080	chr4	protein_coding	expressed sequence C77080
chr4	129119806	129121119	-	129119806	129141914	A5SS	0.2	50	50	ENSMUST00000052602.6	ENSMUSG00000050390.13	C77080	chr4	protein_coding	expressed sequence C77080
chr4	129119806	129121119	-	129119806	129155124	A5SS	0.2	50	50	ENSMUST00000145261.8	ENSMUSG00000050390.13	C77080	chr4	protein_coding	expressed sequence C77080
chr4	129157717	129158540	+	129155905	129158540	A5SS	0.5	50	50	ENSMUST00000153817.8	ENSMUSG00000087575.8	Gm12976	chr4	lncRNA	predicted gene 12976
chr4	129228437	129228718	-	129228437	129229011	A5SS	0.5	50	50	ENSMUST00000102598.4	ENSMUSG00000057236.11	Rbbp4	chr4	protein_coding	retinoblastoma binding protein 4, chromatin remodeling factor
chr4	129229932	129235270	+	129229932;129234545	129234521;129235270	ES	0.5	50	50	ENSMUST00000141235.8	ENSMUSG00000057572.16	Zbtb8os	chr4	protein_coding	zinc finger and BTB domain containing 8 opposite strand
chr4	129235616	129238005	+	129235616;129236966	129236914;129238005	ES	0.5	50	50	ENSMUST00000141235.8	ENSMUSG00000057572.16	Zbtb8os	chr4	protein_coding	zinc finger and BTB domain containing 8 opposite strand
chr4	129238041	129247117	+	129238041	129240597	3pMXE	0.5	50	50	ENSMUST00000141235.8	ENSMUSG00000057572.16	Zbtb8os	chr4	protein_coding	zinc finger and BTB domain containing 8 opposite strand
chr4	129359139	129360707	+	129359139	129360616	A3SS	0.5	50	50	ENSMUST00000048162.10	ENSMUSG00000040859.15	Bsdc1	chr4	protein_coding	BSD domain containing 1
chr4	129358379	129359023	+	129355795	129359023	A5SS	0.5	50	50	ENSMUST00000048162.10	ENSMUSG00000040859.15	Bsdc1	chr4	protein_coding	BSD domain containing 1
chr4	129359234	129360616	+	129359139	129360616	A5SS	0.5	50	50	ENSMUST00000048162.10	ENSMUSG00000040859.15	Bsdc1	chr4	protein_coding	BSD domain containing 1
chr4	129418113	129418214	-	129418113	129422720	A5SS	0.5	50	50	ENSMUST00000102597.5	ENSMUSG00000028800.16	Hdac1	chr4	protein_coding	histone deacetylase 1
chr4	129451983	129467308	-	129451983	129452081	5pMXE	0.5	50	50	ENSMUST00000167288.8	ENSMUSG00000000409.15	Lck	chr4	protein_coding	lymphocyte protein tyrosine kinase
chr4	129471088	129471911	-	129471088	129471205	5pMXE	0.5	50	50	ENSMUST00000142699.2	ENSMUSG00000050493.9	Fam167b	chr4	protein_coding	family with sequence similarity 167, member B
chr4	129488979	129489107	-	129488979	129489057	A5SS	0.5	50	50	ENSMUST00000102593.11	ENSMUSG00000028798.17	Eif3i	chr4	protein_coding	eukaryotic translation initiation factor 3, subunit I
chr4	129492835	129494202	-	129489206	129494202	A3SS	0.5	50	50	ENSMUST00000155428.2	ENSMUSG00000028798.17	Eif3i	chr4	protein_coding	eukaryotic translation initiation factor 3, subunit I
chr4	129489206	129490667	-	129489206	129494202	A5SS	0.5	50	50	ENSMUST00000155428.2	ENSMUSG00000028798.17	Eif3i	chr4	protein_coding	eukaryotic translation initiation factor 3, subunit I
chr4	129495036	129495988	+	129495036;129495754	129495663;129495988	ES	0.2	50	50	ENSMUST00000172774.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129500972	129512277	+	129500972	129501249	3pMXE	0.25	50	50	ENSMUST00000172774.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129500972	129517427	+	129500972	129501249	3pMXE	0.25	50	50	ENSMUST00000172774.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129495036;129495326	129495200;129495663	+	129495036	129495663	cassetteExon	0.5	100	100	ENSMUST00000172774.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129495036;129495326	129495200;129495988	+	129495036;129495754	129495663;129495988	MXE	0.5	100	100	ENSMUST00000172774.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129495036;129495418	129495200;129495663	+	129495036	129495663	cassetteExon	0.5	100	100	ENSMUST00000172774.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129495036;129495418	129495200;129495988	+	129495036;129495754	129495663;129495988	MXE	0.5	100	100	ENSMUST00000172774.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129496054	129496410	+	129496054	129500880	A3SS	0.5	50	50	ENSMUST00000172774.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129500972	129501255	+	129500972	129501249	A3SS	0.25	50	50	ENSMUST00000172774.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129494927	129495663	+	129495036	129495663	A5SS	0.25	50	50	ENSMUST00000172774.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129494927	129495988	+	129495754	129495988	A5SS&ES	0.2	50	50	ENSMUST00000172774.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129494927	129500880	+	129496054	129500880	A5SS&ES	0.33	50	50	ENSMUST00000172774.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129495326	129495988	+	129495326;129495754	129495663;129495988	ES	0.2	50	50	ENSMUST00000129515.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129494927	129495200	+	129495036	129495200	A5SS	0.33	50	50	ENSMUST00000129515.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129494927	129495663	+	129495326	129495663	A5SS&ES	0.25	50	50	ENSMUST00000129515.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129495107	129495200	+	129495036	129495200	A5SS	0.33	50	50	ENSMUST00000129515.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129495418	129495663	+	129495326	129495663	A5SS	0.25	50	50	ENSMUST00000129515.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129495418	129495988	+	129495754	129495988	A5SS&ES	0.2	50	50	ENSMUST00000129515.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129495036	129500880	+	129495036;129496054	129495988;129500880	ES	0.33	50	50	ENSMUST00000137090.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129500972	129517427	+	129500972	129512277	3pMXE	0.25	50	50	ENSMUST00000137090.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129495036;129495326	129495200;129495988	+	129495036	129495988	cassetteExon	0.5	100	100	ENSMUST00000137090.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129495036;129495418	129495200;129495988	+	129495036	129495988	cassetteExon	0.5	100	100	ENSMUST00000137090.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129500972	129501255	+	129500972	129512277	A3SS	0.25	50	50	ENSMUST00000137090.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129494927	129495988	+	129495036	129495988	A5SS	0.2	50	50	ENSMUST00000137090.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129494927	129500880	+	129494927;129496054	129495988;129500880	ES	0.33	50	50	ENSMUST00000102591.10	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129494927;129495326	129495200;129495988	+	129494927	129495988	cassetteExon	0.5	100	100	ENSMUST00000102591.10	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129494927;129495418	129495200;129495988	+	129494927	129495988	cassetteExon	0.5	100	100	ENSMUST00000102591.10	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129494927;129495754	129495663;129495988	+	129494927	129495988	cassetteExon	0.5	100	100	ENSMUST00000102591.10	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129494927	129496015	+	129494927	129495988	A3SS	0.2	50	50	ENSMUST00000102591.10	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129495036	129500880	+	129496054	129500880	A5SS&ES	0.33	50	50	ENSMUST00000102591.10	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129500972	129517427	+	129500972	129501255	3pMXE	0.25	50	50	ENSMUST00000181579.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129494927	129495988	+	129495326	129495988	A5SS&ES	0.2	50	50	ENSMUST00000151969.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129495418	129495988	+	129495326	129495988	A5SS	0.2	50	50	ENSMUST00000151969.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129494927	129500880	+	129494927;129496054	129496015;129500880	ES	0.33	50	50	ENSMUST00000173758.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129494927	129495200	+	129494927	129496015	A3SS	0.2	50	50	ENSMUST00000173758.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129494927	129495663	+	129494927	129496015	A3SS	0.2	50	50	ENSMUST00000173758.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129495036;129496054	129495663;129500880	+	129495036	129500880	cassetteExon	0.5	100	100	ENSMUST00000173937.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129495036	129495200	+	129495036	129500880	A3SS	0.25	50	50	ENSMUST00000173937.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129494927	129500880	+	129495036	129500880	A5SS	0.33	50	50	ENSMUST00000173937.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129494927;129496054	129495663;129500880	+	129494927	129500880	cassetteExon	0.5	100	100	ENSMUST00000174819.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129494927	129495200	+	129494927	129500880	A3SS	0.2	50	50	ENSMUST00000174819.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129494927;129495326	129495200;129495663	+	129494927	129495663	cassetteExon	0.5	100	100	ENSMUST00000150110.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129494927;129495326	129495200;129495988	+	129494927;129495754	129495663;129495988	MXE	0.5	100	100	ENSMUST00000150110.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129494927;129495418	129495200;129495663	+	129494927	129495663	cassetteExon	0.5	100	100	ENSMUST00000150110.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129494927;129495418	129495200;129495988	+	129494927;129495754	129495663;129495988	MXE	0.5	100	100	ENSMUST00000150110.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129495036	129495988	+	129495754	129495988	A5SS&ES	0.2	50	50	ENSMUST00000150110.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129495418;129495754	129495663;129495988	+	129495418	129495988	cassetteExon	0.5	100	100	ENSMUST00000135628.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129494927	129495988	+	129495418	129495988	A5SS&ES	0.2	50	50	ENSMUST00000135628.8	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129494927	129495200	+	129495107	129495200	A5SS	0.33	50	50	ENSMUST00000127919.2	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129495418	129495988	+	129495418	129495663	3pMXE	0.5	50	50	ENSMUST00000174610.2	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129494927	129495663	+	129495418	129495663	A5SS&ES	0.25	50	50	ENSMUST00000174610.2	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129495036	129495988	+	129495418	129495988	A5SS&ES	0.2	50	50	ENSMUST00000145345.2	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129494927	129495663	+	129494927	129495200	3pMXE	0.2	50	50	ENSMUST00000173728.2	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129494927	129495988	+	129494927	129495200	3pMXE	0.2	50	50	ENSMUST00000173728.2	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129495036	129495663	+	129495036	129495200	A3SS	0.25	50	50	ENSMUST00000144304.2	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129495036	129495988	+	129495036	129495200	A3SS	0.25	50	50	ENSMUST00000144304.2	ENSMUSG00000028797.21	Tmem234	chr4	protein_coding	transmembrane protein 234
chr4	129502636	129502875	-	129502141	129502875	A3SS	0.5	50	50	ENSMUST00000179209.8	ENSMUSG00000078552.11	Dcdc2b	chr4	protein_coding	doublecortin domain containing 2b
chr4	129505613	129507800	-	129504878	129507800	A3SS	0.5	50	50	ENSMUST00000179209.8	ENSMUSG00000078552.11	Dcdc2b	chr4	protein_coding	doublecortin domain containing 2b
chr4	129512155	129512285	-	129511709	129512285	A3SS	0.5	50	50	ENSMUST00000046675.12	ENSMUSG00000040795.13	Iqcc	chr4	protein_coding	IQ motif containing C
chr4	129512428	129512667	-	129512428	129512807	A5SS	0.5	50	50	ENSMUST00000046675.12	ENSMUSG00000040795.13	Iqcc	chr4	protein_coding	IQ motif containing C
chr4	129516580;129517497	129517232;129517607	-	129516580	129517607	cassetteExon	0.5	100	100	ENSMUST00000030586.15	ENSMUSG00000028795.16	Ccdc28b	chr4	protein_coding	coiled coil domain containing 28B
chr4	129516580;129517497	129517451;129517607	-	129516580	129517607	cassetteExon	0.5	100	100	ENSMUST00000030586.15	ENSMUSG00000028795.16	Ccdc28b	chr4	protein_coding	coiled coil domain containing 28B
chr4	129514646	129514777	-	129514669	129514777	A3SS	0.33	50	50	ENSMUST00000030586.15	ENSMUSG00000028795.16	Ccdc28b	chr4	protein_coding	coiled coil domain containing 28B
chr4	129514679	129514777	-	129514669	129514777	A3SS	0.33	50	50	ENSMUST00000030586.15	ENSMUSG00000028795.16	Ccdc28b	chr4	protein_coding	coiled coil domain containing 28B
chr4	129514943	129515155	-	129514943	129516393	A5SS	0.5	50	50	ENSMUST00000030586.15	ENSMUSG00000028795.16	Ccdc28b	chr4	protein_coding	coiled coil domain containing 28B
chr4	129514679	129514777	-	129514646	129514777	A3SS	0.33	50	50	ENSMUST00000151838.8	ENSMUSG00000028795.16	Ccdc28b	chr4	protein_coding	coiled coil domain containing 28B
chr4	129516580	129517232	-	129516580	129517451	A5SS	0.33	50	50	ENSMUST00000150357.2	ENSMUSG00000028795.16	Ccdc28b	chr4	protein_coding	coiled coil domain containing 28B
chr4	129516580	129517607	-	129517497	129517607	3pMXE	0.5	50	50	ENSMUST00000152290.2	ENSMUSG00000028795.16	Ccdc28b	chr4	protein_coding	coiled coil domain containing 28B
chr4	129534220	129534347	-	129534220	129534764	A5SS	0.25	50	50	ENSMUST00000046425.16	ENSMUSG00000053841.16	Txlna	chr4	protein_coding	taxilin alpha
chr4	129534220	129534724	-	129534220	129534764	A5SS	0.25	50	50	ENSMUST00000046425.16	ENSMUSG00000053841.16	Txlna	chr4	protein_coding	taxilin alpha
chr4	129534220	129534749	-	129534220	129534764	A5SS	0.25	50	50	ENSMUST00000046425.16	ENSMUSG00000053841.16	Txlna	chr4	protein_coding	taxilin alpha
chr4	129534220	129534347	-	129534220	129534749	A5SS	0.25	50	50	ENSMUST00000154105.8	ENSMUSG00000053841.16	Txlna	chr4	protein_coding	taxilin alpha
chr4	129534220	129534724	-	129534220	129534749	A5SS	0.25	50	50	ENSMUST00000154105.8	ENSMUSG00000053841.16	Txlna	chr4	protein_coding	taxilin alpha
chr4	129534220	129534347	-	129534220	129534724	A5SS	0.25	50	50	ENSMUST00000132217.8	ENSMUSG00000053841.16	Txlna	chr4	protein_coding	taxilin alpha
chr4	129555232	129556193	-	129555232	129566470	A5SS	0.33	50	50	ENSMUST00000102590.11	ENSMUSG00000003731.14	Kpna6	chr4	protein_coding	karyopherin (importin) alpha 6
chr4	129555232	129566202	-	129555232	129566470	A5SS	0.33	50	50	ENSMUST00000102590.11	ENSMUSG00000003731.14	Kpna6	chr4	protein_coding	karyopherin (importin) alpha 6
chr4	129555232	129566202	-	129555232	129556193	5pMXE	0.33	50	50	ENSMUST00000003828.11	ENSMUSG00000003731.14	Kpna6	chr4	protein_coding	karyopherin (importin) alpha 6
chr4	129586309	129586859	-	129586309;129586511	129586429;129586859	ES	0.33	50	50	ENSMUST00000125445.8	ENSMUSG00000053730.16	Tmem39b	chr4	protein_coding	transmembrane protein 39b
chr4	129586466	129586859	-	129586511	129586859	A3SS	0.33	50	50	ENSMUST00000125445.8	ENSMUSG00000053730.16	Tmem39b	chr4	protein_coding	transmembrane protein 39b
chr4	129587805	129590338	-	129587805	129590508	A5SS	0.5	50	50	ENSMUST00000125445.8	ENSMUSG00000053730.16	Tmem39b	chr4	protein_coding	transmembrane protein 39b
chr4	129586309;129586466	129586429;129586859	-	129586309	129586859	cassetteExon	0.5	100	100	ENSMUST00000102588.10	ENSMUSG00000053730.16	Tmem39b	chr4	protein_coding	transmembrane protein 39b
chr4	129586309	129586859	-	129586466	129586859	A3SS	0.33	50	50	ENSMUST00000147668.2	ENSMUSG00000053730.16	Tmem39b	chr4	protein_coding	transmembrane protein 39b
chr4	129714394	129732771	+	129706097	129732771	A5SS	0.25	50	50	ENSMUST00000132386.2	ENSMUSG00000028788.15	Ptp4a2	chr4	protein_coding	protein tyrosine phosphatase 4a2
chr4	129714541	129732771	+	129706097	129732771	A5SS	0.25	50	50	ENSMUST00000132386.2	ENSMUSG00000028788.15	Ptp4a2	chr4	protein_coding	protein tyrosine phosphatase 4a2
chr4	129714592	129732771	+	129706097	129732771	A5SS	0.25	50	50	ENSMUST00000132386.2	ENSMUSG00000028788.15	Ptp4a2	chr4	protein_coding	protein tyrosine phosphatase 4a2
chr4	129736555	129740258	+	129736555;129738985	129738855;129740258	ES	0.5	50	50	ENSMUST00000030578.14	ENSMUSG00000028788.15	Ptp4a2	chr4	protein_coding	protein tyrosine phosphatase 4a2
chr4	129714541	129732771	+	129714394	129732771	A5SS	0.25	50	50	ENSMUST00000030578.14	ENSMUSG00000028788.15	Ptp4a2	chr4	protein_coding	protein tyrosine phosphatase 4a2
chr4	129714592	129732771	+	129714394	129732771	A5SS	0.25	50	50	ENSMUST00000030578.14	ENSMUSG00000028788.15	Ptp4a2	chr4	protein_coding	protein tyrosine phosphatase 4a2
chr4	129714541	129732771	+	129714592	129732771	A5SS	0.25	50	50	ENSMUST00000127558.2	ENSMUSG00000028788.15	Ptp4a2	chr4	protein_coding	protein tyrosine phosphatase 4a2
chr4	129800407	129802233	+	129800307	129802233	A5SS	0.5	50	50	ENSMUST00000145196.8	ENSMUSG00000086369.8	E330017L17Rik	chr4	lncRNA	RIKEN cDNA E330017L17 gene
chr4	129802378	129802499	+	129802382	129802499	A5SS	0.5	50	50	ENSMUST00000145196.8	ENSMUSG00000086369.8	E330017L17Rik	chr4	lncRNA	RIKEN cDNA E330017L17 gene
chr4	129841531	129842628	+	129841545	129842628	A5SS	0.5	50	50	ENSMUST00000084263.6	ENSMUSG00000028784.15	Spocd1	chr4	protein_coding	SPOC domain containing 1
chr4	129854773	129854992	+	129854601	129854992	A5SS	0.5	50	50	ENSMUST00000147634.8	ENSMUSG00000085389.8	1700003M07Rik	chr4	lncRNA	RIKEN cDNA 1700003M07 gene
chr4	129898901;129900709	129900545;129901355	+	129898901;129899347	129899183;129901355	MXE	0.5	100	100	ENSMUST00000120204.8	ENSMUSG00000028782.15	Adgrb2	chr4	protein_coding	adhesion G protein-coupled receptor B2
chr4	129899347;129900709	129900545;129901355	+	129899347	129901355	cassetteExon	0.5	100	100	ENSMUST00000120204.8	ENSMUSG00000028782.15	Adgrb2	chr4	protein_coding	adhesion G protein-coupled receptor B2
chr4	129908429;129908826	129908728;129910855	+	129908429	129910855	cassetteExon	0.5	100	100	ENSMUST00000120204.8	ENSMUSG00000028782.15	Adgrb2	chr4	protein_coding	adhesion G protein-coupled receptor B2
chr4	129908429;129910489	129910427;129910855	+	129908429	129910855	cassetteExon	0.5	100	100	ENSMUST00000120204.8	ENSMUSG00000028782.15	Adgrb2	chr4	protein_coding	adhesion G protein-coupled receptor B2
chr4	129898901	129900545	+	129898901;129899347	129899183;129900545	ES	0.5	50	50	ENSMUST00000106017.8	ENSMUSG00000028782.15	Adgrb2	chr4	protein_coding	adhesion G protein-coupled receptor B2
chr4	129908429;129908826	129908728;129910855	+	129908429;129910489	129910427;129910855	MXE	0.5	100	100	ENSMUST00000106017.8	ENSMUSG00000028782.15	Adgrb2	chr4	protein_coding	adhesion G protein-coupled receptor B2
chr4	129922139	129931606	-	129921851	129931606	A3SS	0.5	50	50	ENSMUST00000131846.8	ENSMUSG00000085517.8	Gm12963	chr4	lncRNA	predicted gene 12963
chr4	129922139	129922252	-	129922139	129931606	A5SS	0.5	50	50	ENSMUST00000147555.2	ENSMUSG00000085517.8	Gm12963	chr4	lncRNA	predicted gene 12963
chr4	129966678	129967033	+	129966678;129966909	129966862;129967033	ES	0.5	50	50	ENSMUST00000044565.15	ENSMUSG00000040690.16	Col16a1	chr4	protein_coding	collagen, type XVI, alpha 1
chr4	129941876;129943219	129943120;129943426	+	129941876	129943426	cassetteExon	0.5	100	100	ENSMUST00000044565.15	ENSMUSG00000040690.16	Col16a1	chr4	protein_coding	collagen, type XVI, alpha 1
chr4	129974413;129975272	129975228;129976915	+	129974413	129976915	cassetteExon	0.5	100	100	ENSMUST00000044565.15	ENSMUSG00000040690.16	Col16a1	chr4	protein_coding	collagen, type XVI, alpha 1
chr4	129974413;129975314	129975228;129976915	+	129974413	129976915	cassetteExon	0.5	100	100	ENSMUST00000044565.15	ENSMUSG00000040690.16	Col16a1	chr4	protein_coding	collagen, type XVI, alpha 1
chr4	129941876	129943399	+	129941876	129943426	A3SS	0.33	50	50	ENSMUST00000044565.15	ENSMUSG00000040690.16	Col16a1	chr4	protein_coding	collagen, type XVI, alpha 1
chr4	129973510	129973969	+	129973510	129974369	A3SS	0.33	50	50	ENSMUST00000044565.15	ENSMUSG00000040690.16	Col16a1	chr4	protein_coding	collagen, type XVI, alpha 1
chr4	129973510	129973972	+	129973510	129974369	A3SS	0.33	50	50	ENSMUST00000044565.15	ENSMUSG00000040690.16	Col16a1	chr4	protein_coding	collagen, type XVI, alpha 1
chr4	129984353	129986524	+	129984353	129986533	A3SS	0.5	50	50	ENSMUST00000044565.15	ENSMUSG00000040690.16	Col16a1	chr4	protein_coding	collagen, type XVI, alpha 1
chr4	129941876	129943399	+	129941876	129943120	A3SS&ES	0.33	50	50	ENSMUST00000132251.2	ENSMUSG00000040690.16	Col16a1	chr4	protein_coding	collagen, type XVI, alpha 1
chr4	129975314	129976915	+	129975272	129976915	A5SS	0.33	50	50	ENSMUST00000097867.9	ENSMUSG00000040690.16	Col16a1	chr4	protein_coding	collagen, type XVI, alpha 1
chr4	129973510	129973969	+	129973510	129973972	A3SS	0.33	50	50	ENSMUST00000106001.8	ENSMUSG00000040690.16	Col16a1	chr4	protein_coding	collagen, type XVI, alpha 1
chr4	129974413	129976915	+	129974413	129975228	3pMXE	0.5	50	50	ENSMUST00000146606.8	ENSMUSG00000040690.16	Col16a1	chr4	protein_coding	collagen, type XVI, alpha 1
chr4	130031989	130032801	-	130031989	130032216	5pMXE	0.33	50	50	ENSMUST00000120154.9	ENSMUSG00000028778.16	Hcrtr1	chr4	protein_coding	hypocretin (orexin) receptor 1
chr4	130031989	130032841	-	130031989	130032216	5pMXE	0.33	50	50	ENSMUST00000120154.9	ENSMUSG00000028778.16	Hcrtr1	chr4	protein_coding	hypocretin (orexin) receptor 1
chr4	130031555	130031872	-	130031460	130031872	A3SS	0.5	50	50	ENSMUST00000120154.9	ENSMUSG00000028778.16	Hcrtr1	chr4	protein_coding	hypocretin (orexin) receptor 1
chr4	130031989	130032841	-	130031989	130032801	A5SS	0.33	50	50	ENSMUST00000030562.13	ENSMUSG00000028778.16	Hcrtr1	chr4	protein_coding	hypocretin (orexin) receptor 1
chr4	130062926	130066725	-	130062926;130063196	130063104;130066725	ES	0.33	50	50	ENSMUST00000030560.9	ENSMUSG00000028776.15	Tinagl1	chr4	protein_coding	tubulointerstitial nephritis antigen-like 1
chr4	130068000	130068695	-	130068000	130068516	5pMXE	0.5	50	50	ENSMUST00000030560.9	ENSMUSG00000028776.15	Tinagl1	chr4	protein_coding	tubulointerstitial nephritis antigen-like 1
chr4	130065850	130066725	-	130063196	130066725	A3SS	0.33	50	50	ENSMUST00000030560.9	ENSMUSG00000028776.15	Tinagl1	chr4	protein_coding	tubulointerstitial nephritis antigen-like 1
chr4	130065850	130066725	-	130062926	130066725	A3SS	0.33	50	50	ENSMUST00000175992.8	ENSMUSG00000028776.15	Tinagl1	chr4	protein_coding	tubulointerstitial nephritis antigen-like 1
chr4	130062926	130066725	-	130062926	130063104	5pMXE	0.5	50	50	ENSMUST00000145774.3	ENSMUSG00000028776.15	Tinagl1	chr4	protein_coding	tubulointerstitial nephritis antigen-like 1
chr4	130159023	130169251	-	130159023	130168880	5pMXE	0.2	50	50	ENSMUST00000122374.8	ENSMUSG00000023232.18	Serinc2	chr4	protein_coding	serine incorporator 2
chr4	130159023	130172225	-	130159023	130168880	5pMXE	0.2	50	50	ENSMUST00000122374.8	ENSMUSG00000023232.18	Serinc2	chr4	protein_coding	serine incorporator 2
chr4	130159023	130166671	-	130159023	130168880	A5SS	0.2	50	50	ENSMUST00000122374.8	ENSMUSG00000023232.18	Serinc2	chr4	protein_coding	serine incorporator 2
chr4	130159023	130168608	-	130159023	130168880	A5SS	0.2	50	50	ENSMUST00000122374.8	ENSMUSG00000023232.18	Serinc2	chr4	protein_coding	serine incorporator 2
chr4	130159023	130172225	-	130159023	130169251	5pMXE	0.2	50	50	ENSMUST00000105996.8	ENSMUSG00000023232.18	Serinc2	chr4	protein_coding	serine incorporator 2
chr4	130159023;130166716	130166671;130169251	-	130159023	130169251	cassetteExon	0.5	100	100	ENSMUST00000105996.8	ENSMUSG00000023232.18	Serinc2	chr4	protein_coding	serine incorporator 2
chr4	130159023;130168763	130168608;130169251	-	130159023	130169251	cassetteExon	0.5	100	100	ENSMUST00000105996.8	ENSMUSG00000023232.18	Serinc2	chr4	protein_coding	serine incorporator 2
chr4	130159023	130166671	-	130159023	130172225	A5SS	0.2	50	50	ENSMUST00000120126.9	ENSMUSG00000023232.18	Serinc2	chr4	protein_coding	serine incorporator 2
chr4	130159023	130168608	-	130159023	130172225	A5SS	0.2	50	50	ENSMUST00000120126.9	ENSMUSG00000023232.18	Serinc2	chr4	protein_coding	serine incorporator 2
chr4	130159023;130166716	130166671;130169251	-	130159023;130168763	130168608;130169251	MXE	0.5	100	100	ENSMUST00000146478.8	ENSMUSG00000023232.18	Serinc2	chr4	protein_coding	serine incorporator 2
chr4	130210601	130212301	-	130210601	130220986	A5SS	0.5	50	50	ENSMUST00000134159.3	ENSMUSG00000028772.20	Zcchc17	chr4	protein_coding	zinc finger, CCHC domain containing 17
chr4	130232377	130238499	-	130232377	130243058	A5SS	0.5	50	50	ENSMUST00000134159.3	ENSMUSG00000028772.20	Zcchc17	chr4	protein_coding	zinc finger, CCHC domain containing 17
chr4	130262147	130267135	+	130262147	130271839	A3SS	0.5	50	50	ENSMUST00000105994.4	ENSMUSG00000074088.7	Snrnp40	chr4	protein_coding	small nuclear ribonucleoprotein 40 (U5)
chr4	130333984	130337184	+	130333984	130337201	A3SS	0.5	50	50	ENSMUST00000105993.4	ENSMUSG00000078532.10	Nkain1	chr4	protein_coding	Na+/K+ transporting ATPase interacting 1
chr4	130313436	130332056	+	130297541	130332056	A5SS	0.5	50	50	ENSMUST00000105993.4	ENSMUSG00000078532.10	Nkain1	chr4	protein_coding	Na+/K+ transporting ATPase interacting 1
chr4	130468867	130471004	+	130468867	130471001	A3SS	0.5	50	50	ENSMUST00000030315.13	ENSMUSG00000028580.16	Pum1	chr4	protein_coding	pumilio RNA-binding family member 1
chr4	130390705	130396236	+	130390778	130396236	A5SS	0.5	50	50	ENSMUST00000030315.13	ENSMUSG00000028580.16	Pum1	chr4	protein_coding	pumilio RNA-binding family member 1
chr4	130493360	130496127	+	130493366	130496127	A5SS	0.5	50	50	ENSMUST00000030315.13	ENSMUSG00000028580.16	Pum1	chr4	protein_coding	pumilio RNA-binding family member 1
chr4	130428421	130445465	+	130428421	130455309	A3SS	0.33	50	50	ENSMUST00000105992.9	ENSMUSG00000028580.16	Pum1	chr4	protein_coding	pumilio RNA-binding family member 1
chr4	130446662	130455309	+	130428421	130455309	A5SS	0.5	50	50	ENSMUST00000105992.9	ENSMUSG00000028580.16	Pum1	chr4	protein_coding	pumilio RNA-binding family member 1
chr4	130428421	130445465	+	130428421	130468774	A3SS	0.33	50	50	ENSMUST00000105991.9	ENSMUSG00000028580.16	Pum1	chr4	protein_coding	pumilio RNA-binding family member 1
chr4	130428421	130455309	+	130428421	130468774	A3SS	0.33	50	50	ENSMUST00000105991.9	ENSMUSG00000028580.16	Pum1	chr4	protein_coding	pumilio RNA-binding family member 1
chr4	130457859	130468774	+	130428421	130468774	A5SS	0.5	50	50	ENSMUST00000105991.9	ENSMUSG00000028580.16	Pum1	chr4	protein_coding	pumilio RNA-binding family member 1
chr4	130539296	130544156	+	130520113	130544156	A5SS	0.33	50	50	ENSMUST00000070478.4	ENSMUSG00000025743.15	Sdc3	chr4	protein_coding	syndecan 3
chr4	130541677	130544156	+	130520113	130544156	A5SS	0.33	50	50	ENSMUST00000070478.4	ENSMUSG00000025743.15	Sdc3	chr4	protein_coding	syndecan 3
chr4	130541677	130544156	+	130539296	130544156	A5SS	0.33	50	50	ENSMUST00000152591.8	ENSMUSG00000025743.15	Sdc3	chr4	protein_coding	syndecan 3
chr4	130640745	130652128	+	130640745	130653416	A3SS	0.5	50	50	ENSMUST00000151698.8	ENSMUSG00000028581.18	Laptm5	chr4	protein_coding	lysosomal-associated protein transmembrane 5
chr4	130653509	130654052	+	130653509	130654082	A3SS	0.33	50	50	ENSMUST00000151698.8	ENSMUSG00000028581.18	Laptm5	chr4	protein_coding	lysosomal-associated protein transmembrane 5
chr4	130653509	130654063	+	130653509	130654082	A3SS	0.33	50	50	ENSMUST00000151698.8	ENSMUSG00000028581.18	Laptm5	chr4	protein_coding	lysosomal-associated protein transmembrane 5
chr4	130659420	130660941	+	130659420	130661772	A3SS	0.33	50	50	ENSMUST00000151698.8	ENSMUSG00000028581.18	Laptm5	chr4	protein_coding	lysosomal-associated protein transmembrane 5
chr4	130659420	130660943	+	130659420	130661772	A3SS	0.33	50	50	ENSMUST00000151698.8	ENSMUSG00000028581.18	Laptm5	chr4	protein_coding	lysosomal-associated protein transmembrane 5
chr4	130642895	130653416	+	130640745	130653416	A5SS	0.25	50	50	ENSMUST00000151698.8	ENSMUSG00000028581.18	Laptm5	chr4	protein_coding	lysosomal-associated protein transmembrane 5
chr4	130643224	130653416	+	130640745	130653416	A5SS	0.25	50	50	ENSMUST00000151698.8	ENSMUSG00000028581.18	Laptm5	chr4	protein_coding	lysosomal-associated protein transmembrane 5
chr4	130643354	130653416	+	130640745	130653416	A5SS	0.25	50	50	ENSMUST00000151698.8	ENSMUSG00000028581.18	Laptm5	chr4	protein_coding	lysosomal-associated protein transmembrane 5
chr4	130653509	130654063	+	130653509	130654052	A3SS	0.33	50	50	ENSMUST00000156225.8	ENSMUSG00000028581.18	Laptm5	chr4	protein_coding	lysosomal-associated protein transmembrane 5
chr4	130659420	130660943	+	130659420	130660941	A3SS	0.33	50	50	ENSMUST00000156742.8	ENSMUSG00000028581.18	Laptm5	chr4	protein_coding	lysosomal-associated protein transmembrane 5
chr4	130643224	130653416	+	130642895	130653416	A5SS	0.25	50	50	ENSMUST00000123550.8	ENSMUSG00000028581.18	Laptm5	chr4	protein_coding	lysosomal-associated protein transmembrane 5
chr4	130643354	130653416	+	130642895	130653416	A5SS	0.25	50	50	ENSMUST00000123550.8	ENSMUSG00000028581.18	Laptm5	chr4	protein_coding	lysosomal-associated protein transmembrane 5
chr4	130643354	130653416	+	130643224	130653416	A5SS	0.25	50	50	ENSMUST00000143450.2	ENSMUSG00000028581.18	Laptm5	chr4	protein_coding	lysosomal-associated protein transmembrane 5
chr4	130731692	130737600	-	130731692	130733164	5pMXE	0.5	50	50	ENSMUST00000130882.8	ENSMUSG00000086262.8	A930031H19Rik	chr4	lncRNA	RIKEN cDNA A930031H19 gene
chr4	131520986;131522301	131522272;131525164	-	131520986	131525164	cassetteExon	0.5	100	100	ENSMUST00000105987.9	ENSMUSG00000028909.18	Ptpru	chr4	protein_coding	protein tyrosine phosphatase, receptor type, U
chr4	131513071	131514619	-	131508177	131514619	A3SS	0.5	50	50	ENSMUST00000105987.9	ENSMUSG00000028909.18	Ptpru	chr4	protein_coding	protein tyrosine phosphatase, receptor type, U
chr4	131548290	131548803	-	131548290	131551143	A5SS	0.5	50	50	ENSMUST00000105987.9	ENSMUSG00000028909.18	Ptpru	chr4	protein_coding	protein tyrosine phosphatase, receptor type, U
chr4	131570989;131579736	131579635;131581027	+	131570989	131581027	cassetteExon	0.5	100	100	ENSMUST00000030742.11	ENSMUSG00000028910.13	Mecr	chr4	protein_coding	mitochondrial trans-2-enoyl-CoA reductase
chr4	131588174;131588543	131588488;131589087	+	131588174	131589087	cassetteExon	0.5	100	100	ENSMUST00000030742.11	ENSMUSG00000028910.13	Mecr	chr4	protein_coding	mitochondrial trans-2-enoyl-CoA reductase
chr4	131570989	131571106	+	131570989	131581027	A3SS	0.33	50	50	ENSMUST00000030742.11	ENSMUSG00000028910.13	Mecr	chr4	protein_coding	mitochondrial trans-2-enoyl-CoA reductase
chr4	131570989	131571106	+	131570989	131579635	A3SS	0.33	50	50	ENSMUST00000137321.3	ENSMUSG00000028910.13	Mecr	chr4	protein_coding	mitochondrial trans-2-enoyl-CoA reductase
chr4	131601181	131611587	+	131601181	131618518	A3SS	0.5	50	50	ENSMUST00000053819.6	ENSMUSG00000028911.17	Srsf4	chr4	protein_coding	serine and arginine-rich splicing factor 4
chr4	131613615	131618518	+	131601181	131618518	A5SS	0.5	50	50	ENSMUST00000053819.6	ENSMUSG00000028911.17	Srsf4	chr4	protein_coding	serine and arginine-rich splicing factor 4
chr4	131612803	131613442	+	131612803	131613418	A3SS	0.5	50	50	ENSMUST00000129966.8	ENSMUSG00000028911.17	Srsf4	chr4	protein_coding	serine and arginine-rich splicing factor 4
chr4	131641106	131642755	-	131638669	131642755	A3SS	0.5	50	50	ENSMUST00000124738.2	ENSMUSG00000085667.2	Gm12992	chr4	lncRNA	predicted gene 12992
chr4	131655883	131663050	-	131655883;131657106	131657005;131663050	ES	0.5	50	50	ENSMUST00000155990.8	ENSMUSG00000028906.18	Epb41	chr4	protein_coding	erythrocyte membrane protein band 4.1
chr4	131663178	131664326	-	131663163	131664326	A3SS	0.5	50	50	ENSMUST00000155990.8	ENSMUSG00000028906.18	Epb41	chr4	protein_coding	erythrocyte membrane protein band 4.1
chr4	131690297	131695099	-	131690297;131691281	131691240;131695099	ES	0.25	50	50	ENSMUST00000146443.8	ENSMUSG00000028906.18	Epb41	chr4	protein_coding	erythrocyte membrane protein band 4.1
chr4	131663178;131664775	131664326;131684954	-	131663178	131684954	cassetteExon	0.5	100	100	ENSMUST00000146443.8	ENSMUSG00000028906.18	Epb41	chr4	protein_coding	erythrocyte membrane protein band 4.1
chr4	131690297;131691498	131691442;131695099	-	131690297;131691281	131691240;131695099	MXE	0.5	100	100	ENSMUST00000146443.8	ENSMUSG00000028906.18	Epb41	chr4	protein_coding	erythrocyte membrane protein band 4.1
chr4	131691281;131691498	131691442;131695099	-	131691281	131695099	cassetteExon	0.5	100	100	ENSMUST00000146443.8	ENSMUSG00000028906.18	Epb41	chr4	protein_coding	erythrocyte membrane protein band 4.1
chr4	131682889	131684954	-	131663178	131684954	A3SS	0.33	50	50	ENSMUST00000146443.8	ENSMUSG00000028906.18	Epb41	chr4	protein_coding	erythrocyte membrane protein band 4.1
chr4	131685130;131690297	131690235;131695099	-	131685130	131695099	cassetteExon	0.5	100	100	ENSMUST00000135579.8	ENSMUSG00000028906.18	Epb41	chr4	protein_coding	erythrocyte membrane protein band 4.1
chr4	131682889	131684954	-	131664775	131684954	A3SS	0.33	50	50	ENSMUST00000135579.8	ENSMUSG00000028906.18	Epb41	chr4	protein_coding	erythrocyte membrane protein band 4.1
chr4	131691281	131695099	-	131685130	131695099	A3SS	0.25	50	50	ENSMUST00000135579.8	ENSMUSG00000028906.18	Epb41	chr4	protein_coding	erythrocyte membrane protein band 4.1
chr4	131691498	131695099	-	131685130	131695099	A3SS	0.25	50	50	ENSMUST00000135579.8	ENSMUSG00000028906.18	Epb41	chr4	protein_coding	erythrocyte membrane protein band 4.1
chr4	131724852	131730896	-	131724852;131727615	131727511;131730896	ES	0.5	50	50	ENSMUST00000137846.8	ENSMUSG00000028906.18	Epb41	chr4	protein_coding	erythrocyte membrane protein band 4.1
chr4	131690297;131691498	131691240;131695099	-	131690297	131695099	cassetteExon	0.5	100	100	ENSMUST00000137846.8	ENSMUSG00000028906.18	Epb41	chr4	protein_coding	erythrocyte membrane protein band 4.1
chr4	131690297;131691498	131691442;131695099	-	131690297	131695099	cassetteExon	0.5	100	100	ENSMUST00000137846.8	ENSMUSG00000028906.18	Epb41	chr4	protein_coding	erythrocyte membrane protein band 4.1
chr4	131695283	131701995	-	131695286	131701995	A3SS	0.5	50	50	ENSMUST00000137846.8	ENSMUSG00000028906.18	Epb41	chr4	protein_coding	erythrocyte membrane protein band 4.1
chr4	131731105;131733434	131733354;131734269	-	131731105	131734269	cassetteExon	0.5	100	100	ENSMUST00000054917.12	ENSMUSG00000028906.18	Epb41	chr4	protein_coding	erythrocyte membrane protein band 4.1
chr4	131731105;131733434	131733360;131734269	-	131731105	131734269	cassetteExon	0.5	100	100	ENSMUST00000054917.12	ENSMUSG00000028906.18	Epb41	chr4	protein_coding	erythrocyte membrane protein band 4.1
chr4	131734749	131802513	-	131734732	131802513	A3SS	0.5	50	50	ENSMUST00000105970.8	ENSMUSG00000028906.18	Epb41	chr4	protein_coding	erythrocyte membrane protein band 4.1
chr4	131731105	131733354	-	131731105	131733360	A5SS	0.33	50	50	ENSMUST00000105970.8	ENSMUSG00000028906.18	Epb41	chr4	protein_coding	erythrocyte membrane protein band 4.1
chr4	131734732	131802491	-	131734732	131802513	A5SS	0.5	50	50	ENSMUST00000105970.8	ENSMUSG00000028906.18	Epb41	chr4	protein_coding	erythrocyte membrane protein band 4.1
chr4	131690297;131691281	131691240;131691442	-	131690297	131691442	cassetteExon	0.5	100	100	ENSMUST00000105975.8	ENSMUSG00000028906.18	Epb41	chr4	protein_coding	erythrocyte membrane protein band 4.1
chr4	131734749	131776182	-	131734749	131802513	A5SS	0.33	50	50	ENSMUST00000105975.8	ENSMUSG00000028906.18	Epb41	chr4	protein_coding	erythrocyte membrane protein band 4.1
chr4	131734749	131797939	-	131734749	131802513	A5SS	0.33	50	50	ENSMUST00000105975.8	ENSMUSG00000028906.18	Epb41	chr4	protein_coding	erythrocyte membrane protein band 4.1
chr4	131797997	131802491	-	131734732	131802491	A3SS	0.5	50	50	ENSMUST00000146021.8	ENSMUSG00000028906.18	Epb41	chr4	protein_coding	erythrocyte membrane protein band 4.1
chr4	131734749	131797939	-	131734749	131776182	5pMXE	0.33	50	50	ENSMUST00000105981.9	ENSMUSG00000028906.18	Epb41	chr4	protein_coding	erythrocyte membrane protein band 4.1
chr4	131724852	131730896	-	131724852	131727511	5pMXE	0.5	50	50	ENSMUST00000136761.2	ENSMUSG00000028906.18	Epb41	chr4	protein_coding	erythrocyte membrane protein band 4.1
chr4	131914258	131938063	-	131914258;131933026	131931443;131938063	ES	0.5	50	50	ENSMUST00000152796.8	ENSMUSG00000040025.18	Ythdf2	chr4	protein_coding	YTH N6-methyladenosine RNA binding protein 2
chr4	131914258	131932825	-	131914258	131931443	A5SS	0.33	50	50	ENSMUST00000152796.8	ENSMUSG00000040025.18	Ythdf2	chr4	protein_coding	YTH N6-methyladenosine RNA binding protein 2
chr4	131914258;131933026	131932825;131938063	-	131914258	131938063	cassetteExon	0.5	100	100	ENSMUST00000085181.5	ENSMUSG00000040025.18	Ythdf2	chr4	protein_coding	YTH N6-methyladenosine RNA binding protein 2
chr4	131914258	131931443	-	131914258	131938063	A5SS	0.33	50	50	ENSMUST00000085181.5	ENSMUSG00000040025.18	Ythdf2	chr4	protein_coding	YTH N6-methyladenosine RNA binding protein 2
chr4	131979143	131981276	-	131979143	131979742	5pMXE	0.33	50	50	ENSMUST00000168553.8	ENSMUSG00000028901.14	Gmeb1	chr4	protein_coding	glucocorticoid modulatory element binding protein 1
chr4	131979143	131988802	-	131979143	131979742	5pMXE	0.33	50	50	ENSMUST00000168553.8	ENSMUSG00000028901.14	Gmeb1	chr4	protein_coding	glucocorticoid modulatory element binding protein 1
chr4	131979143	131988802	-	131979143;131979804	131979742;131988802	ES	0.5	50	50	ENSMUST00000105965.8	ENSMUSG00000028901.14	Gmeb1	chr4	protein_coding	glucocorticoid modulatory element binding protein 1
chr4	131979143	131981276	-	131979143	131988802	A5SS	0.33	50	50	ENSMUST00000105964.2	ENSMUSG00000028901.14	Gmeb1	chr4	protein_coding	glucocorticoid modulatory element binding protein 1
chr4	132001798;132009389	132009305;132010105	+	132001798	132010105	cassetteExon	0.5	100	100	ENSMUST00000030731.11	ENSMUSG00000028899.12	Taf12	chr4	protein_coding	TATA-box binding protein associated factor 12
chr4	132001798	132003934	+	132001798	132010105	A3SS	0.33	50	50	ENSMUST00000030731.11	ENSMUSG00000028899.12	Taf12	chr4	protein_coding	TATA-box binding protein associated factor 12
chr4	132001798	132009305	+	132001798	132003934	3pMXE	0.33	50	50	ENSMUST00000124365.2	ENSMUSG00000028899.12	Taf12	chr4	protein_coding	TATA-box binding protein associated factor 12
chr4	132036252	132037149	+	132036218	132037149	A5SS	0.5	50	50	ENSMUST00000232260.2	ENSMUSG00000086290.10	Snhg12	chr4	lncRNA	small nucleolar RNA host gene 12
chr4	132041678	132052519	-	132041678;132049121	132048990;132052519	ES	0.5	50	50	ENSMUST00000105962.10	ENSMUSG00000028898.16	Trnau1ap	chr4	protein_coding	tRNA selenocysteine 1 associated protein 1
chr4	132052571	132055780	-	132052571;132053356	132053257;132055780	ES	0.5	50	50	ENSMUST00000105962.10	ENSMUSG00000028898.16	Trnau1ap	chr4	protein_coding	tRNA selenocysteine 1 associated protein 1
chr4	132053356	132056664	-	132053356;132055877	132055780;132056664	ES	0.25	50	50	ENSMUST00000105962.10	ENSMUSG00000028898.16	Trnau1ap	chr4	protein_coding	tRNA selenocysteine 1 associated protein 1
chr4	132041678;132046885	132046766;132048990	-	132041678	132048990	cassetteExon	0.5	100	100	ENSMUST00000105962.10	ENSMUSG00000028898.16	Trnau1ap	chr4	protein_coding	tRNA selenocysteine 1 associated protein 1
chr4	132052571;132052800	132052663;132053257	-	132052571	132053257	cassetteExon	0.5	100	100	ENSMUST00000105962.10	ENSMUSG00000028898.16	Trnau1ap	chr4	protein_coding	tRNA selenocysteine 1 associated protein 1
chr4	132053356;132054489	132054433;132056664	-	132053356;132055877	132055780;132056664	MXE	0.5	100	100	ENSMUST00000105962.10	ENSMUSG00000028898.16	Trnau1ap	chr4	protein_coding	tRNA selenocysteine 1 associated protein 1
chr4	132046885	132049000	-	132046885	132048990	A5SS	0.5	50	50	ENSMUST00000030730.14	ENSMUSG00000028898.16	Trnau1ap	chr4	protein_coding	tRNA selenocysteine 1 associated protein 1
chr4	132052571	132055780	-	132053356	132055780	A3SS	0.5	50	50	ENSMUST00000146166.8	ENSMUSG00000028898.16	Trnau1ap	chr4	protein_coding	tRNA selenocysteine 1 associated protein 1
chr4	132052571	132056664	-	132055877	132056664	A3SS&ES	0.25	50	50	ENSMUST00000146166.8	ENSMUSG00000028898.16	Trnau1ap	chr4	protein_coding	tRNA selenocysteine 1 associated protein 1
chr4	132052571	132056664	-	132052571;132053356	132053257;132056664	ES	0.25	50	50	ENSMUST00000150959.8	ENSMUSG00000028898.16	Trnau1ap	chr4	protein_coding	tRNA selenocysteine 1 associated protein 1
chr4	132053356;132054489	132054433;132056664	-	132053356	132056664	cassetteExon	0.5	100	100	ENSMUST00000150959.8	ENSMUSG00000028898.16	Trnau1ap	chr4	protein_coding	tRNA selenocysteine 1 associated protein 1
chr4	132052571;132055877	132055780;132056664	-	132052571;132053356	132053257;132056664	MXE	0.5	100	100	ENSMUST00000150959.8	ENSMUSG00000028898.16	Trnau1ap	chr4	protein_coding	tRNA selenocysteine 1 associated protein 1
chr4	132041678	132046766	-	132041678	132052519	A5SS	0.33	50	50	ENSMUST00000150959.8	ENSMUSG00000028898.16	Trnau1ap	chr4	protein_coding	tRNA selenocysteine 1 associated protein 1
chr4	132052571	132056664	-	132052571;132055877	132055780;132056664	ES	0.25	50	50	ENSMUST00000137520.8	ENSMUSG00000028898.16	Trnau1ap	chr4	protein_coding	tRNA selenocysteine 1 associated protein 1
chr4	132054489	132056664	-	132055877	132056664	A3SS&ES	0.25	50	50	ENSMUST00000137520.8	ENSMUSG00000028898.16	Trnau1ap	chr4	protein_coding	tRNA selenocysteine 1 associated protein 1
chr4	132041678	132048990	-	132041678	132046766	A5SS&ES	0.33	50	50	ENSMUST00000137520.8	ENSMUSG00000028898.16	Trnau1ap	chr4	protein_coding	tRNA selenocysteine 1 associated protein 1
chr4	132052571	132052663	-	132052571	132055780	A5SS	0.25	50	50	ENSMUST00000137520.8	ENSMUSG00000028898.16	Trnau1ap	chr4	protein_coding	tRNA selenocysteine 1 associated protein 1
chr4	132052571;132055877	132055780;132056664	-	132052571;132054489	132053257;132056664	MXE	0.5	100	100	ENSMUST00000125513.9	ENSMUSG00000028898.16	Trnau1ap	chr4	protein_coding	tRNA selenocysteine 1 associated protein 1
chr4	132041678	132052519	-	132049121	132052519	3pMXE	0.5	50	50	ENSMUST00000144387.2	ENSMUSG00000028898.16	Trnau1ap	chr4	protein_coding	tRNA selenocysteine 1 associated protein 1
chr4	132054489	132056664	-	132052571	132056664	A3SS	0.25	50	50	ENSMUST00000105960.3	ENSMUSG00000028898.16	Trnau1ap	chr4	protein_coding	tRNA selenocysteine 1 associated protein 1
chr4	132052571	132052663	-	132052571	132056664	A5SS	0.25	50	50	ENSMUST00000105960.3	ENSMUSG00000028898.16	Trnau1ap	chr4	protein_coding	tRNA selenocysteine 1 associated protein 1
chr4	132053356	132056664	-	132055877	132056664	3pMXE	0.25	50	50	ENSMUST00000141317.2	ENSMUSG00000028898.16	Trnau1ap	chr4	protein_coding	tRNA selenocysteine 1 associated protein 1
chr4	132067317	132075311	-	132067317	132072957	5pMXE	0.33	50	50	ENSMUST00000084250.11	ENSMUSG00000028896.14	Rcc1	chr4	protein_coding	regulator of chromosome condensation 1
chr4	132065549;132066552	132066514;132067236	-	132065549	132067236	cassetteExon	0.5	100	100	ENSMUST00000084250.11	ENSMUSG00000028896.14	Rcc1	chr4	protein_coding	regulator of chromosome condensation 1
chr4	132067317	132072317	-	132067317	132072957	A5SS	0.33	50	50	ENSMUST00000084250.11	ENSMUSG00000028896.14	Rcc1	chr4	protein_coding	regulator of chromosome condensation 1
chr4	132075431	132079433	-	132075431	132078922	5pMXE	0.33	50	50	ENSMUST00000105951.8	ENSMUSG00000028896.14	Rcc1	chr4	protein_coding	regulator of chromosome condensation 1
chr4	132075431	132079991	-	132075431	132078922	5pMXE	0.33	50	50	ENSMUST00000105951.8	ENSMUSG00000028896.14	Rcc1	chr4	protein_coding	regulator of chromosome condensation 1
chr4	132067317	132072317	-	132067317	132075311	A5SS	0.33	50	50	ENSMUST00000105951.8	ENSMUSG00000028896.14	Rcc1	chr4	protein_coding	regulator of chromosome condensation 1
chr4	132075431	132079433	-	132075431	132079991	A5SS	0.33	50	50	ENSMUST00000155129.2	ENSMUSG00000028896.14	Rcc1	chr4	protein_coding	regulator of chromosome condensation 1
chr4	132080009	132080484	-	132080009	132080908	A5SS	0.5	50	50	ENSMUST00000155129.2	ENSMUSG00000028896.14	Rcc1	chr4	protein_coding	regulator of chromosome condensation 1
chr4	132065549	132067236	-	132066552	132067236	3pMXE	0.5	50	50	ENSMUST00000131307.8	ENSMUSG00000028896.14	Rcc1	chr4	protein_coding	regulator of chromosome condensation 1
chr4	132079554	132079931	-	132079554	132079974	A5SS	0.5	50	50	ENSMUST00000155816.8	ENSMUSG00000085241.8	Snhg3	chr4	lncRNA	small nucleolar RNA host gene 3
chr4	132105874	132114203	-	132105874;132110673	132110593;132114203	ES	0.5	50	50	ENSMUST00000102568.10	ENSMUSG00000066043.14	Phactr4	chr4	protein_coding	phosphatase and actin regulator 4
chr4	132088073	132088889	-	132087862	132088889	A3SS	0.5	50	50	ENSMUST00000102568.10	ENSMUSG00000066043.14	Phactr4	chr4	protein_coding	phosphatase and actin regulator 4
chr4	132114376	132125263	-	132114376	132140381	A5SS	0.5	50	50	ENSMUST00000102568.10	ENSMUSG00000066043.14	Phactr4	chr4	protein_coding	phosphatase and actin regulator 4
chr4	132262974	132265498	+	132262974;132263457	132263294;132265498	ES	0.5	50	50	ENSMUST00000139074.8	ENSMUSG00000054405.15	Dnajc8	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C8
chr4	132265599	132271367	+	132265599;132269149	132269093;132271367	ES	0.5	50	50	ENSMUST00000139074.8	ENSMUSG00000054405.15	Dnajc8	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C8
chr4	132271433	132273948	+	132271433;132272062	132271968;132273948	ES	0.5	50	50	ENSMUST00000139074.8	ENSMUSG00000054405.15	Dnajc8	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C8
chr4	132265599	132269032	+	132265599	132269093	A3SS	0.33	50	50	ENSMUST00000139074.8	ENSMUSG00000054405.15	Dnajc8	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C8
chr4	132269149	132271321	+	132269149	132271367	A3SS	0.5	50	50	ENSMUST00000139074.8	ENSMUSG00000054405.15	Dnajc8	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C8
chr4	132262974	132269093	+	132262974;132265599	132265498;132269093	ES	0.5	50	50	ENSMUST00000094657.10	ENSMUSG00000054405.15	Dnajc8	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C8
chr4	132277779	132280328	+	132277779;132278921	132278846;132280328	ES	0.33	50	50	ENSMUST00000094657.10	ENSMUSG00000054405.15	Dnajc8	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C8
chr4	132278921;132279460	132279352;132280328	+	132278921	132280328	cassetteExon	0.5	100	100	ENSMUST00000094657.10	ENSMUSG00000054405.15	Dnajc8	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C8
chr4	132271433	132273948	+	132272062	132273948	A5SS	0.5	50	50	ENSMUST00000142281.8	ENSMUSG00000054405.15	Dnajc8	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C8
chr4	132265599	132271367	+	132265599;132269149	132269032;132271367	ES	0.5	50	50	ENSMUST00000144073.8	ENSMUSG00000054405.15	Dnajc8	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C8
chr4	132262974	132269093	+	132262974	132265498	A3SS&ES	0.33	50	50	ENSMUST00000144073.8	ENSMUSG00000054405.15	Dnajc8	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C8
chr4	132262974;132269149	132269093;132271367	+	132262974;132265599	132265498;132271367	MXE	0.5	100	100	ENSMUST00000105940.10	ENSMUSG00000054405.15	Dnajc8	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C8
chr4	132265599	132271367	+	132265599	132269093	A3SS&ES	0.33	50	50	ENSMUST00000067467.13	ENSMUSG00000054405.15	Dnajc8	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C8
chr4	132262974	132263294	+	132262974	132269093	A3SS	0.33	50	50	ENSMUST00000105939.10	ENSMUSG00000054405.15	Dnajc8	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C8
chr4	132279460	132280328	+	132277779	132280328	A5SS	0.33	50	50	ENSMUST00000150207.8	ENSMUSG00000054405.15	Dnajc8	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C8
chr4	132262974	132265498	+	132263457	132265498	5pMXE	0.5	50	50	ENSMUST00000105938.4	ENSMUSG00000054405.15	Dnajc8	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C8
chr4	132277779	132280328	+	132278921	132280328	5pMXE	0.33	50	50	ENSMUST00000105937.3	ENSMUSG00000054405.15	Dnajc8	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C8
chr4	132384099	132394466	+	132384099;132389249	132389206;132394466	ES	0.5	50	50	ENSMUST00000135299.8	ENSMUSG00000028886.16	Eya3	chr4	protein_coding	EYA transcriptional coactivator and phosphatase 3
chr4	132389249	132397500	+	132389249;132394545	132394466;132397500	ES	0.5	50	50	ENSMUST00000135299.8	ENSMUSG00000028886.16	Eya3	chr4	protein_coding	EYA transcriptional coactivator and phosphatase 3
chr4	132400343	132417016	+	132400343;132408204	132408067;132417016	ES	0.2	50	50	ENSMUST00000135299.8	ENSMUSG00000028886.16	Eya3	chr4	protein_coding	EYA transcriptional coactivator and phosphatase 3
chr4	132384099;132384927	132384889;132389206	+	132384099	132389206	cassetteExon	0.5	100	100	ENSMUST00000135299.8	ENSMUSG00000028886.16	Eya3	chr4	protein_coding	EYA transcriptional coactivator and phosphatase 3
chr4	132397526	132417016	+	132408204	132417016	A5SS&ES	0.2	50	50	ENSMUST00000135299.8	ENSMUSG00000028886.16	Eya3	chr4	protein_coding	EYA transcriptional coactivator and phosphatase 3
chr4	132397566	132420273	+	132397566;132417101	132417016;132420273	ES	0.5	50	50	ENSMUST00000020197.14	ENSMUSG00000028886.16	Eya3	chr4	protein_coding	EYA transcriptional coactivator and phosphatase 3
chr4	132434434	132439153	+	132434434;132437370	132437256;132439153	ES	0.5	50	50	ENSMUST00000020197.14	ENSMUSG00000028886.16	Eya3	chr4	protein_coding	EYA transcriptional coactivator and phosphatase 3
chr4	132384099;132389249	132389206;132397500	+	132384099;132394545	132394466;132397500	MXE	0.5	100	100	ENSMUST00000020197.14	ENSMUSG00000028886.16	Eya3	chr4	protein_coding	EYA transcriptional coactivator and phosphatase 3
chr4	132384099;132389249	132389206;132417016	+	132384099;132397566	132394466;132417016	MXE	0.5	100	100	ENSMUST00000020197.14	ENSMUSG00000028886.16	Eya3	chr4	protein_coding	EYA transcriptional coactivator and phosphatase 3
chr4	132397566;132400343	132400207;132417016	+	132397566	132417016	cassetteExon	0.5	100	100	ENSMUST00000020197.14	ENSMUSG00000028886.16	Eya3	chr4	protein_coding	EYA transcriptional coactivator and phosphatase 3
chr4	132428421;132430808	132430743;132431663	+	132428421	132431663	cassetteExon	0.5	100	100	ENSMUST00000020197.14	ENSMUSG00000028886.16	Eya3	chr4	protein_coding	EYA transcriptional coactivator and phosphatase 3
chr4	132384099	132384889	+	132384099	132394466	A3SS	0.33	50	50	ENSMUST00000020197.14	ENSMUSG00000028886.16	Eya3	chr4	protein_coding	EYA transcriptional coactivator and phosphatase 3
chr4	132397526	132417016	+	132397566	132417016	A5SS	0.2	50	50	ENSMUST00000020197.14	ENSMUSG00000028886.16	Eya3	chr4	protein_coding	EYA transcriptional coactivator and phosphatase 3
chr4	132408204	132417016	+	132397566	132417016	A5SS	0.2	50	50	ENSMUST00000020197.14	ENSMUSG00000028886.16	Eya3	chr4	protein_coding	EYA transcriptional coactivator and phosphatase 3
chr4	132397526	132417016	+	132400343	132417016	A5SS&ES	0.2	50	50	ENSMUST00000081726.13	ENSMUSG00000028886.16	Eya3	chr4	protein_coding	EYA transcriptional coactivator and phosphatase 3
chr4	132389249;132397526	132397500;132417016	+	132389249	132417016	cassetteExon	0.5	100	100	ENSMUST00000127682.8	ENSMUSG00000028886.16	Eya3	chr4	protein_coding	EYA transcriptional coactivator and phosphatase 3
chr4	132389249;132397566	132397500;132417016	+	132389249	132417016	cassetteExon	0.5	100	100	ENSMUST00000127682.8	ENSMUSG00000028886.16	Eya3	chr4	protein_coding	EYA transcriptional coactivator and phosphatase 3
chr4	132389249;132397566	132397500;132420273	+	132389249;132417101	132417016;132420273	MXE	0.5	100	100	ENSMUST00000127682.8	ENSMUSG00000028886.16	Eya3	chr4	protein_coding	EYA transcriptional coactivator and phosphatase 3
chr4	132384099	132394466	+	132384099	132389206	A3SS&ES	0.33	50	50	ENSMUST00000127682.8	ENSMUSG00000028886.16	Eya3	chr4	protein_coding	EYA transcriptional coactivator and phosphatase 3
chr4	132389249	132394466	+	132389249	132417016	A3SS	0.33	50	50	ENSMUST00000127682.8	ENSMUSG00000028886.16	Eya3	chr4	protein_coding	EYA transcriptional coactivator and phosphatase 3
chr4	132400343	132417016	+	132389249	132417016	A5SS	0.2	50	50	ENSMUST00000127682.8	ENSMUSG00000028886.16	Eya3	chr4	protein_coding	EYA transcriptional coactivator and phosphatase 3
chr4	132408204	132417016	+	132389249	132417016	A5SS	0.2	50	50	ENSMUST00000127682.8	ENSMUSG00000028886.16	Eya3	chr4	protein_coding	EYA transcriptional coactivator and phosphatase 3
chr4	132397566	132420273	+	132417101	132420273	A5SS&ES	0.5	50	50	ENSMUST00000157029.8	ENSMUSG00000028886.16	Eya3	chr4	protein_coding	EYA transcriptional coactivator and phosphatase 3
chr4	132384099;132394545	132394466;132397500	+	132384099;132389249	132384889;132397500	MXE	0.5	100	100	ENSMUST00000145668.8	ENSMUSG00000028886.16	Eya3	chr4	protein_coding	EYA transcriptional coactivator and phosphatase 3
chr4	132397566	132400207	+	132397566	132420273	A3SS	0.33	50	50	ENSMUST00000142998.8	ENSMUSG00000028886.16	Eya3	chr4	protein_coding	EYA transcriptional coactivator and phosphatase 3
chr4	132458450	132459484	-	132458383	132459484	A3SS	0.5	50	50	ENSMUST00000045550.5	ENSMUSG00000037752.5	Xkr8	chr4	protein_coding	X-linked Kx blood group related 8
chr4	132458383	132459726	-	132458383	132459484	A5SS	0.5	50	50	ENSMUST00000045550.5	ENSMUSG00000037752.5	Xkr8	chr4	protein_coding	X-linked Kx blood group related 8
chr4	132496097	132497857	+	132496097	132503600	A3SS	0.5	50	50	ENSMUST00000153046.8	ENSMUSG00000028884.15	Rpa2	chr4	protein_coding	replication protein A2
chr4	132555514	132556684	-	132555517	132556684	A3SS	0.5	50	50	ENSMUST00000030702.14	ENSMUSG00000028882.14	Ppp1r8	chr4	protein_coding	protein phosphatase 1, regulatory subunit 8
chr4	132568015	132570120	-	132568015	132570368	A5SS	0.5	50	50	ENSMUST00000030702.14	ENSMUSG00000028882.14	Ppp1r8	chr4	protein_coding	protein phosphatase 1, regulatory subunit 8
chr4	132631344	132640980	-	132631344;132638089	132638003;132640980	ES	0.5	50	50	ENSMUST00000030696.11	ENSMUSG00000028878.12	Fam76a	chr4	protein_coding	family with sequence similarity 76, member A
chr4	132648102	132648186	-	132648102	132649669	A5SS	0.5	50	50	ENSMUST00000030696.11	ENSMUSG00000028878.12	Fam76a	chr4	protein_coding	family with sequence similarity 76, member A
chr4	132704773	132711463	+	132701581	132711463	A5SS	0.5	50	50	ENSMUST00000124451.2	ENSMUSG00000028874.15	Fgr	chr4	protein_coding	FGR proto-oncogene, Src family tyrosine kinase
chr4	132782514	132782606	+	132782514	132788092	A3SS	0.25	50	50	ENSMUST00000154646.8	ENSMUSG00000037692.15	Ahdc1	chr4	protein_coding	AT hook, DNA binding motif, containing 1
chr4	132782514	132787973	+	132782514	132788092	A3SS	0.25	50	50	ENSMUST00000154646.8	ENSMUSG00000037692.15	Ahdc1	chr4	protein_coding	AT hook, DNA binding motif, containing 1
chr4	132782514	132787987	+	132782514	132788092	A3SS	0.25	50	50	ENSMUST00000154646.8	ENSMUSG00000037692.15	Ahdc1	chr4	protein_coding	AT hook, DNA binding motif, containing 1
chr4	132739269	132739501	+	132738834	132739501	A5SS	0.5	50	50	ENSMUST00000154646.8	ENSMUSG00000037692.15	Ahdc1	chr4	protein_coding	AT hook, DNA binding motif, containing 1
chr4	132767097	132782324	+	132739598	132782324	A5SS	0.5	50	50	ENSMUST00000154646.8	ENSMUSG00000037692.15	Ahdc1	chr4	protein_coding	AT hook, DNA binding motif, containing 1
chr4	132782514;132782816	132782606;132787987	+	132782514	132787987	cassetteExon	0.5	100	100	ENSMUST00000105915.8	ENSMUSG00000037692.15	Ahdc1	chr4	protein_coding	AT hook, DNA binding motif, containing 1
chr4	132782514	132787973	+	132782514	132787987	A3SS	0.25	50	50	ENSMUST00000105915.8	ENSMUSG00000037692.15	Ahdc1	chr4	protein_coding	AT hook, DNA binding motif, containing 1
chr4	132788203	132788340	+	132788203	132788338	A3SS	0.5	50	50	ENSMUST00000105915.8	ENSMUSG00000037692.15	Ahdc1	chr4	protein_coding	AT hook, DNA binding motif, containing 1
chr4	132793588	132798887	+	132793588	132804298	A3SS	0.5	50	50	ENSMUST00000105915.8	ENSMUSG00000037692.15	Ahdc1	chr4	protein_coding	AT hook, DNA binding motif, containing 1
chr4	132782514;132782816	132782606;132787973	+	132782514	132787973	cassetteExon	0.5	100	100	ENSMUST00000105916.8	ENSMUSG00000037692.15	Ahdc1	chr4	protein_coding	AT hook, DNA binding motif, containing 1
chr4	132739269	132739501	+	132739269	132739504	A3SS	0.5	50	50	ENSMUST00000145682.2	ENSMUSG00000037692.15	Ahdc1	chr4	protein_coding	AT hook, DNA binding motif, containing 1
chr4	132782514	132787973	+	132782514	132782606	A3SS&ES	0.25	50	50	ENSMUST00000156677.8	ENSMUSG00000037692.15	Ahdc1	chr4	protein_coding	AT hook, DNA binding motif, containing 1
chr4	132782816	132787973	+	132782816	132787987	A3SS	0.5	50	50	ENSMUST00000156677.8	ENSMUSG00000037692.15	Ahdc1	chr4	protein_coding	AT hook, DNA binding motif, containing 1
chr4	132782514	132787987	+	132782514	132782606	A3SS&ES	0.25	50	50	ENSMUST00000154482.8	ENSMUSG00000037692.15	Ahdc1	chr4	protein_coding	AT hook, DNA binding motif, containing 1
chr4	132858039;132887841	132887697;132903752	+	132858039	132903752	cassetteExon	0.5	100	100	ENSMUST00000084241.12	ENSMUSG00000028868.14	Wasf2	chr4	protein_coding	WASP family, member 2
chr4	132858034	132903752	+	132858039	132903752	A5SS	0.25	50	50	ENSMUST00000084241.12	ENSMUSG00000028868.14	Wasf2	chr4	protein_coding	WASP family, member 2
chr4	132903362	132903752	+	132858039	132903752	A5SS	0.25	50	50	ENSMUST00000084241.12	ENSMUSG00000028868.14	Wasf2	chr4	protein_coding	WASP family, member 2
chr4	132887841	132903752	+	132858034	132903752	A5SS	0.25	50	50	ENSMUST00000138831.2	ENSMUSG00000028868.14	Wasf2	chr4	protein_coding	WASP family, member 2
chr4	132903362	132903752	+	132858034	132903752	A5SS	0.25	50	50	ENSMUST00000138831.2	ENSMUSG00000028868.14	Wasf2	chr4	protein_coding	WASP family, member 2
chr4	132903362	132903752	+	132887841	132903752	A5SS	0.25	50	50	ENSMUST00000136132.2	ENSMUSG00000028868.14	Wasf2	chr4	protein_coding	WASP family, member 2
chr4	132938675	132939527	-	132938675	132939730	A5SS	0.5	50	50	ENSMUST00000052090.9	ENSMUSG00000049649.9	Gpr3	chr4	protein_coding	G-protein coupled receptor 3
chr4	132939840	132948754	+	132939619	132948754	A5SS	0.25	50	50	ENSMUST00000150744.2	ENSMUSG00000028865.15	Cd164l2	chr4	protein_coding	CD164 sialomucin-like 2
chr4	132940229	132948754	+	132939619	132948754	A5SS	0.25	50	50	ENSMUST00000150744.2	ENSMUSG00000028865.15	Cd164l2	chr4	protein_coding	CD164 sialomucin-like 2
chr4	132948378	132948754	+	132939619	132948754	A5SS	0.25	50	50	ENSMUST00000150744.2	ENSMUSG00000028865.15	Cd164l2	chr4	protein_coding	CD164 sialomucin-like 2
chr4	132949087	132950914	+	132949087;132949524	132949480;132950914	ES	0.5	50	50	ENSMUST00000218338.2	ENSMUSG00000028865.15	Cd164l2	chr4	protein_coding	CD164 sialomucin-like 2
chr4	132951058	132951563	+	132951058	132951306	3pMXE	0.33	50	50	ENSMUST00000218338.2	ENSMUSG00000028865.15	Cd164l2	chr4	protein_coding	CD164 sialomucin-like 2
chr4	132951058	132951675	+	132951058	132951306	3pMXE	0.33	50	50	ENSMUST00000218338.2	ENSMUSG00000028865.15	Cd164l2	chr4	protein_coding	CD164 sialomucin-like 2
chr4	132940229	132948754	+	132939840	132948754	A5SS	0.25	50	50	ENSMUST00000218338.2	ENSMUSG00000028865.15	Cd164l2	chr4	protein_coding	CD164 sialomucin-like 2
chr4	132948378	132948754	+	132939840	132948754	A5SS	0.25	50	50	ENSMUST00000218338.2	ENSMUSG00000028865.15	Cd164l2	chr4	protein_coding	CD164 sialomucin-like 2
chr4	132948378	132948754	+	132940229	132948754	A5SS	0.25	50	50	ENSMUST00000218998.2	ENSMUSG00000028865.15	Cd164l2	chr4	protein_coding	CD164 sialomucin-like 2
chr4	132951058	132951675	+	132951058	132951563	A3SS	0.33	50	50	ENSMUST00000105910.2	ENSMUSG00000028865.15	Cd164l2	chr4	protein_coding	CD164 sialomucin-like 2
chr4	132983123;132983511	132983353;132983799	-	132983123	132983799	cassetteExon	0.5	100	100	ENSMUST00000105908.10	ENSMUSG00000028860.14	Sytl1	chr4	protein_coding	synaptotagmin-like 1
chr4	132980542	132988164	-	132986747	132988164	A3SS&ES	0.5	50	50	ENSMUST00000105908.10	ENSMUSG00000028860.14	Sytl1	chr4	protein_coding	synaptotagmin-like 1
chr4	132985132	132986172	-	132985096	132986172	A3SS	0.5	50	50	ENSMUST00000105908.10	ENSMUSG00000028860.14	Sytl1	chr4	protein_coding	synaptotagmin-like 1
chr4	132983123	132983799	-	132983123	132983353	A5SS	0.5	50	50	ENSMUST00000142039.8	ENSMUSG00000028860.14	Sytl1	chr4	protein_coding	synaptotagmin-like 1
chr4	132995816	132998274	-	132995816;132997120	132997089;132998274	ES	0.33	50	50	ENSMUST00000105907.9	ENSMUSG00000028857.17	Tmem222	chr4	protein_coding	transmembrane protein 222
chr4	132997120	133004842	-	132997120;132998358	132998274;133004842	ES	0.5	50	50	ENSMUST00000105907.9	ENSMUSG00000028857.17	Tmem222	chr4	protein_coding	transmembrane protein 222
chr4	132997120;132998125	132997981;132998274	-	132997120	132998274	cassetteExon	0.5	100	100	ENSMUST00000105907.9	ENSMUSG00000028857.17	Tmem222	chr4	protein_coding	transmembrane protein 222
chr4	132995816;132997120	132997089;133004842	-	132995816;132998358	132998274;133004842	MXE	0.5	100	100	ENSMUST00000137622.8	ENSMUSG00000028857.17	Tmem222	chr4	protein_coding	transmembrane protein 222
chr4	132998125	132998274	-	132995816	132998274	A3SS	0.33	50	50	ENSMUST00000137622.8	ENSMUSG00000028857.17	Tmem222	chr4	protein_coding	transmembrane protein 222
chr4	132997120;132998358	132997981;133004842	-	132997120	133004842	cassetteExon	0.5	100	100	ENSMUST00000139030.2	ENSMUSG00000028857.17	Tmem222	chr4	protein_coding	transmembrane protein 222
chr4	132995816	132998274	-	132995816	132997089	5pMXE	0.5	50	50	ENSMUST00000132713.2	ENSMUSG00000028857.17	Tmem222	chr4	protein_coding	transmembrane protein 222
chr4	132997120	133004842	-	132998358	133004842	3pMXE	0.5	50	50	ENSMUST00000153059.2	ENSMUSG00000028857.17	Tmem222	chr4	protein_coding	transmembrane protein 222
chr4	133051285	133080097	-	133051285	133066307	5pMXE	0.33	50	50	ENSMUST00000043305.14	ENSMUSG00000037622.15	Wdtc1	chr4	protein_coding	WD and tetratricopeptide repeats 1
chr4	133022643	133023727	-	133022701	133023727	A3SS	0.5	50	50	ENSMUST00000043305.14	ENSMUSG00000037622.15	Wdtc1	chr4	protein_coding	WD and tetratricopeptide repeats 1
chr4	133051285	133054454	-	133051285	133066307	A5SS	0.33	50	50	ENSMUST00000043305.14	ENSMUSG00000037622.15	Wdtc1	chr4	protein_coding	WD and tetratricopeptide repeats 1
chr4	133051285;133054576	133054454;133080097	-	133051285	133080097	cassetteExon	0.5	100	100	ENSMUST00000135929.8	ENSMUSG00000037622.15	Wdtc1	chr4	protein_coding	WD and tetratricopeptide repeats 1
chr4	133098218	133138987	+	133098218	133139148	A3SS	0.5	50	50	ENSMUST00000030669.8	ENSMUSG00000028854.10	Slc9a1	chr4	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 1
chr4	133146854	133147258	+	133146854	133147236	A3SS	0.5	50	50	ENSMUST00000030669.8	ENSMUSG00000028854.10	Slc9a1	chr4	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 1
chr4	133246363	133255253	+	133246363	133255051	A3SS	0.5	50	50	ENSMUST00000149807.2	ENSMUSG00000037600.17	Kdf1	chr4	protein_coding	keratinocyte differentiation factor 1
chr4	133246422	133255051	+	133246363	133255051	A5SS	0.5	50	50	ENSMUST00000149807.2	ENSMUSG00000037600.17	Kdf1	chr4	protein_coding	keratinocyte differentiation factor 1
chr4	133246422	133255253	+	133246363	133255253	A5SS	0.5	50	50	ENSMUST00000042919.16	ENSMUSG00000037600.17	Kdf1	chr4	protein_coding	keratinocyte differentiation factor 1
chr4	133246422	133255253	+	133246422	133255051	A3SS	0.5	50	50	ENSMUST00000153811.2	ENSMUSG00000037600.17	Kdf1	chr4	protein_coding	keratinocyte differentiation factor 1
chr4	133312111	133313221	+	133312180	133313221	A5SS	0.5	50	50	ENSMUST00000030661.14	ENSMUSG00000028848.14	Gpn2	chr4	protein_coding	GPN-loop GTPase 2
chr4	133354671	133377234	-	133354671	133360390	5pMXE	0.5	50	50	ENSMUST00000084238.5	ENSMUSG00000037553.15	Zdhhc18	chr4	protein_coding	zinc finger, DHHC domain containing 18
chr4	133390102	133397049	-	133390102;133393090	133391969;133397049	ES	0.33	50	50	ENSMUST00000062118.11	ENSMUSG00000043257.16	Pigv	chr4	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class V
chr4	133396268	133397049	-	133393090	133397049	A3SS	0.33	50	50	ENSMUST00000062118.11	ENSMUSG00000043257.16	Pigv	chr4	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class V
chr4	133393090	133397049	-	133390102	133397049	A3SS	0.33	50	50	ENSMUST00000067902.13	ENSMUSG00000043257.16	Pigv	chr4	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class V
chr4	133396268	133397049	-	133390102	133397049	A3SS	0.33	50	50	ENSMUST00000067902.13	ENSMUSG00000043257.16	Pigv	chr4	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class V
chr4	133390102	133391969	-	133390102	133397049	A5SS	0.5	50	50	ENSMUST00000067902.13	ENSMUSG00000043257.16	Pigv	chr4	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class V
chr4	133450362	133481225	-	133450362	133479780	5pMXE	0.33	50	50	ENSMUST00000145664.9	ENSMUSG00000007880.17	Arid1a	chr4	protein_coding	AT rich interactive domain 1A (SWI-like)
chr4	133450362	133483706	-	133450362	133479780	5pMXE	0.33	50	50	ENSMUST00000145664.9	ENSMUSG00000007880.17	Arid1a	chr4	protein_coding	AT rich interactive domain 1A (SWI-like)
chr4	133414690	133414849	-	133414687	133414849	A3SS	0.5	50	50	ENSMUST00000145664.9	ENSMUSG00000007880.17	Arid1a	chr4	protein_coding	AT rich interactive domain 1A (SWI-like)
chr4	133413636	133413730	-	133413636	133413715	A5SS	0.5	50	50	ENSMUST00000145664.9	ENSMUSG00000007880.17	Arid1a	chr4	protein_coding	AT rich interactive domain 1A (SWI-like)
chr4	133450362	133481225	-	133450362	133483706	A5SS	0.33	50	50	ENSMUST00000008024.7	ENSMUSG00000007880.17	Arid1a	chr4	protein_coding	AT rich interactive domain 1A (SWI-like)
chr4	133598942	133608228	-	133598942;133599314	133599198;133608228	ES	0.33	50	50	ENSMUST00000105894.11	ENSMUSG00000003644.18	Rps6ka1	chr4	protein_coding	ribosomal protein S6 kinase polypeptide 1
chr4	133599314;133600047	133599910;133608228	-	133599314	133608228	cassetteExon	0.5	100	100	ENSMUST00000105894.11	ENSMUSG00000003644.18	Rps6ka1	chr4	protein_coding	ribosomal protein S6 kinase polypeptide 1
chr4	133592709	133593074	-	133592742	133593074	A3SS	0.5	50	50	ENSMUST00000105894.11	ENSMUSG00000003644.18	Rps6ka1	chr4	protein_coding	ribosomal protein S6 kinase polypeptide 1
chr4	133599314	133600155	-	133599314	133608228	A5SS	0.25	50	50	ENSMUST00000105894.11	ENSMUSG00000003644.18	Rps6ka1	chr4	protein_coding	ribosomal protein S6 kinase polypeptide 1
chr4	133599314	133601919	-	133599314	133608228	A5SS	0.25	50	50	ENSMUST00000105894.11	ENSMUSG00000003644.18	Rps6ka1	chr4	protein_coding	ribosomal protein S6 kinase polypeptide 1
chr4	133608272	133613484	-	133608272	133614881	A5SS	0.5	50	50	ENSMUST00000105894.11	ENSMUSG00000003644.18	Rps6ka1	chr4	protein_coding	ribosomal protein S6 kinase polypeptide 1
chr4	133599314	133599910	-	133599314	133601919	A5SS	0.25	50	50	ENSMUST00000168974.9	ENSMUSG00000003644.18	Rps6ka1	chr4	protein_coding	ribosomal protein S6 kinase polypeptide 1
chr4	133599314	133600155	-	133599314	133601919	A5SS	0.25	50	50	ENSMUST00000168974.9	ENSMUSG00000003644.18	Rps6ka1	chr4	protein_coding	ribosomal protein S6 kinase polypeptide 1
chr4	133598942	133608228	-	133598942	133599198	5pMXE	0.5	50	50	ENSMUST00000157067.9	ENSMUSG00000003644.18	Rps6ka1	chr4	protein_coding	ribosomal protein S6 kinase polypeptide 1
chr4	133600047	133608228	-	133598942	133608228	A3SS	0.33	50	50	ENSMUST00000174481.8	ENSMUSG00000003644.18	Rps6ka1	chr4	protein_coding	ribosomal protein S6 kinase polypeptide 1
chr4	133599314	133599910	-	133599314	133600155	A5SS	0.25	50	50	ENSMUST00000137486.3	ENSMUSG00000003644.18	Rps6ka1	chr4	protein_coding	ribosomal protein S6 kinase polypeptide 1
chr4	133600019	133602653	+	133599334	133602653	A5SS	0.5	50	50	ENSMUST00000133742.2	ENSMUSG00000085009.2	Gm12977	chr4	lncRNA	predicted gene 12977
chr4	133694312	133695784	-	133694312	133695106	5pMXE	0.2	50	50	ENSMUST00000102553.11	ENSMUSG00000003038.16	Hmgn2	chr4	protein_coding	high mobility group nucleosomal binding domain 2
chr4	133693790	133694071	-	133693790	133694077	A5SS	0.5	50	50	ENSMUST00000102553.11	ENSMUSG00000003038.16	Hmgn2	chr4	protein_coding	high mobility group nucleosomal binding domain 2
chr4	133694312	133694414	-	133694312	133695106	A5SS	0.2	50	50	ENSMUST00000102553.11	ENSMUSG00000003038.16	Hmgn2	chr4	protein_coding	high mobility group nucleosomal binding domain 2
chr4	133694312	133694475	-	133694312	133695106	A5SS	0.2	50	50	ENSMUST00000102553.11	ENSMUSG00000003038.16	Hmgn2	chr4	protein_coding	high mobility group nucleosomal binding domain 2
chr4	133694312	133694586	-	133694312	133695106	A5SS	0.2	50	50	ENSMUST00000102553.11	ENSMUSG00000003038.16	Hmgn2	chr4	protein_coding	high mobility group nucleosomal binding domain 2
chr4	133694312	133695784	-	133694312	133694586	5pMXE	0.2	50	50	ENSMUST00000105893.8	ENSMUSG00000003038.16	Hmgn2	chr4	protein_coding	high mobility group nucleosomal binding domain 2
chr4	133694312	133694414	-	133694312	133694586	A5SS	0.2	50	50	ENSMUST00000105893.8	ENSMUSG00000003038.16	Hmgn2	chr4	protein_coding	high mobility group nucleosomal binding domain 2
chr4	133694312	133694475	-	133694312	133694586	A5SS	0.2	50	50	ENSMUST00000105893.8	ENSMUSG00000003038.16	Hmgn2	chr4	protein_coding	high mobility group nucleosomal binding domain 2
chr4	133694312	133695784	-	133694312;133695220	133695106;133695784	ES	0.5	50	50	ENSMUST00000102552.8	ENSMUSG00000003038.16	Hmgn2	chr4	protein_coding	high mobility group nucleosomal binding domain 2
chr4	133694312	133694414	-	133694312	133695784	A5SS	0.2	50	50	ENSMUST00000138458.8	ENSMUSG00000003038.16	Hmgn2	chr4	protein_coding	high mobility group nucleosomal binding domain 2
chr4	133694312	133694475	-	133694312	133695784	A5SS	0.2	50	50	ENSMUST00000138458.8	ENSMUSG00000003038.16	Hmgn2	chr4	protein_coding	high mobility group nucleosomal binding domain 2
chr4	133694312	133694475	-	133694312	133694414	A5SS	0.2	50	50	ENSMUST00000125266.8	ENSMUSG00000003038.16	Hmgn2	chr4	protein_coding	high mobility group nucleosomal binding domain 2
chr4	133698564	133710111	-	133698564;133707542	133707435;133710111	ES	0.5	50	50	ENSMUST00000144668.8	ENSMUSG00000012117.14	Dhdds	chr4	protein_coding	dehydrodolichyl diphosphate synthase
chr4	133710225	133719775	-	133710225;133718691	133718590;133719775	ES	0.5	50	50	ENSMUST00000144668.8	ENSMUSG00000012117.14	Dhdds	chr4	protein_coding	dehydrodolichyl diphosphate synthase
chr4	133718691	133721473	-	133718691;133719891	133719775;133721473	ES	0.5	50	50	ENSMUST00000144668.8	ENSMUSG00000012117.14	Dhdds	chr4	protein_coding	dehydrodolichyl diphosphate synthase
chr4	133721615;133724042	133723917;133724133	-	133721615	133724133	cassetteExon	0.5	100	100	ENSMUST00000144668.8	ENSMUSG00000012117.14	Dhdds	chr4	protein_coding	dehydrodolichyl diphosphate synthase
chr4	133721615;133724046	133723917;133724133	-	133721615	133724133	cassetteExon	0.5	100	100	ENSMUST00000144668.8	ENSMUSG00000012117.14	Dhdds	chr4	protein_coding	dehydrodolichyl diphosphate synthase
chr4	133698567	133707435	-	133698564	133707435	A3SS	0.5	50	50	ENSMUST00000144668.8	ENSMUSG00000012117.14	Dhdds	chr4	protein_coding	dehydrodolichyl diphosphate synthase
chr4	133721640	133724133	-	133721615	133724133	A3SS	0.25	50	50	ENSMUST00000144668.8	ENSMUSG00000012117.14	Dhdds	chr4	protein_coding	dehydrodolichyl diphosphate synthase
chr4	133727650	133728036	-	133727704	133728036	A3SS	0.5	50	50	ENSMUST00000144668.8	ENSMUSG00000012117.14	Dhdds	chr4	protein_coding	dehydrodolichyl diphosphate synthase
chr4	133727704	133728178	-	133727704	133728036	A5SS	0.5	50	50	ENSMUST00000144668.8	ENSMUSG00000012117.14	Dhdds	chr4	protein_coding	dehydrodolichyl diphosphate synthase
chr4	133698564	133710111	-	133698564	133707435	5pMXE	0.5	50	50	ENSMUST00000134096.2	ENSMUSG00000012117.14	Dhdds	chr4	protein_coding	dehydrodolichyl diphosphate synthase
chr4	133724042	133724133	-	133721640	133724133	A3SS	0.25	50	50	ENSMUST00000142660.8	ENSMUSG00000012117.14	Dhdds	chr4	protein_coding	dehydrodolichyl diphosphate synthase
chr4	133724046	133724133	-	133721640	133724133	A3SS	0.25	50	50	ENSMUST00000142660.8	ENSMUSG00000012117.14	Dhdds	chr4	protein_coding	dehydrodolichyl diphosphate synthase
chr4	133724046	133724133	-	133724042	133724133	A3SS	0.25	50	50	ENSMUST00000146241.8	ENSMUSG00000012117.14	Dhdds	chr4	protein_coding	dehydrodolichyl diphosphate synthase
chr4	133698564	133710111	-	133707542	133710111	A3SS&ES	0.5	50	50	ENSMUST00000105887.8	ENSMUSG00000012117.14	Dhdds	chr4	protein_coding	dehydrodolichyl diphosphate synthase
chr4	133710225;133718691	133718590;133721473	-	133710225;133719891	133719775;133721473	MXE	0.5	100	100	ENSMUST00000130464.8	ENSMUSG00000012117.14	Dhdds	chr4	protein_coding	dehydrodolichyl diphosphate synthase
chr4	133735406	133735562	-	133735406	133745364	A5SS	0.33	50	50	ENSMUST00000051674.3	ENSMUSG00000050966.10	Lin28a	chr4	protein_coding	lin-28 homolog A (C. elegans)
chr4	133735406	133739567	-	133735406	133745364	A5SS	0.33	50	50	ENSMUST00000051674.3	ENSMUSG00000050966.10	Lin28a	chr4	protein_coding	lin-28 homolog A (C. elegans)
chr4	133735406	133735562	-	133735406	133739567	A5SS	0.33	50	50	ENSMUST00000176113.8	ENSMUSG00000050966.10	Lin28a	chr4	protein_coding	lin-28 homolog A (C. elegans)
chr4	133790683	133792550	+	133790683	133799741	A3SS	0.5	50	50	ENSMUST00000219402.3	ENSMUSG00000012123.18	Crybg2	chr4	protein_coding	crystallin beta-gamma domain containing 2
chr4	133793265	133799741	+	133790683	133799741	A5SS	0.33	50	50	ENSMUST00000219402.3	ENSMUSG00000012123.18	Crybg2	chr4	protein_coding	crystallin beta-gamma domain containing 2
chr4	133795847	133799741	+	133790683	133799741	A5SS	0.33	50	50	ENSMUST00000219402.3	ENSMUSG00000012123.18	Crybg2	chr4	protein_coding	crystallin beta-gamma domain containing 2
chr4	133790683	133799741	+	133790683;133793265	133792550;133799741	ES	0.33	50	50	ENSMUST00000227683.2	ENSMUSG00000012123.18	Crybg2	chr4	protein_coding	crystallin beta-gamma domain containing 2
chr4	133807773	133808400	+	133807773;133808126	133808091;133808400	ES	0.5	50	50	ENSMUST00000227683.2	ENSMUSG00000012123.18	Crybg2	chr4	protein_coding	crystallin beta-gamma domain containing 2
chr4	133809179	133809726	+	133809179;133809393	133809267;133809726	ES	0.5	50	50	ENSMUST00000227683.2	ENSMUSG00000012123.18	Crybg2	chr4	protein_coding	crystallin beta-gamma domain containing 2
chr4	133809758	133814797	+	133809758;133809998	133809886;133814797	ES	0.5	50	50	ENSMUST00000227683.2	ENSMUSG00000012123.18	Crybg2	chr4	protein_coding	crystallin beta-gamma domain containing 2
chr4	133818547	133819630	+	133818547;133819520	133819361;133819630	ES	0.5	50	50	ENSMUST00000227683.2	ENSMUSG00000012123.18	Crybg2	chr4	protein_coding	crystallin beta-gamma domain containing 2
chr4	133795847	133799741	+	133793265	133799741	A5SS	0.33	50	50	ENSMUST00000227683.2	ENSMUSG00000012123.18	Crybg2	chr4	protein_coding	crystallin beta-gamma domain containing 2
chr4	133809785	133809886	+	133809758	133809886	A5SS	0.5	50	50	ENSMUST00000227683.2	ENSMUSG00000012123.18	Crybg2	chr4	protein_coding	crystallin beta-gamma domain containing 2
chr4	133809758	133814797	+	133809758	133809886	3pMXE	0.5	50	50	ENSMUST00000149504.2	ENSMUSG00000012123.18	Crybg2	chr4	protein_coding	crystallin beta-gamma domain containing 2
chr4	133821211	133822245	-	133810030	133822245	A3SS	0.33	50	50	ENSMUST00000145122.2	ENSMUSG00000000682.8	Cd52	chr4	protein_coding	CD52 antigen
chr4	133821787	133822245	-	133810030	133822245	A3SS	0.33	50	50	ENSMUST00000145122.2	ENSMUSG00000000682.8	Cd52	chr4	protein_coding	CD52 antigen
chr4	133821787	133822245	-	133821211	133822245	A3SS	0.33	50	50	ENSMUST00000000696.7	ENSMUSG00000000682.8	Cd52	chr4	protein_coding	CD52 antigen
chr4	133851230	133852377	+	133851230;133852265	133852145;133852377	ES	0.5	50	50	ENSMUST00000131329.8	ENSMUSG00000012126.17	Ubxn11	chr4	protein_coding	UBX domain protein 11
chr4	133829959	133835563	+	133829959	133843342	A3SS	0.5	50	50	ENSMUST00000131329.8	ENSMUSG00000012126.17	Ubxn11	chr4	protein_coding	UBX domain protein 11
chr4	133843468	133850699	+	133843468	133850703	A3SS	0.5	50	50	ENSMUST00000131329.8	ENSMUSG00000012126.17	Ubxn11	chr4	protein_coding	UBX domain protein 11
chr4	133836969	133850703	+	133843468	133850703	A5SS&ES	0.5	50	50	ENSMUST00000131329.8	ENSMUSG00000012126.17	Ubxn11	chr4	protein_coding	UBX domain protein 11
chr4	133840744	133843342	+	133829959	133843342	A5SS	0.5	50	50	ENSMUST00000131329.8	ENSMUSG00000012126.17	Ubxn11	chr4	protein_coding	UBX domain protein 11
chr4	133851451	133852145	+	133851230	133852145	A5SS	0.5	50	50	ENSMUST00000131329.8	ENSMUSG00000012126.17	Ubxn11	chr4	protein_coding	UBX domain protein 11
chr4	133835666	133836405	+	133835666	133836402	A3SS	0.5	50	50	ENSMUST00000074690.11	ENSMUSG00000012126.17	Ubxn11	chr4	protein_coding	UBX domain protein 11
chr4	133836956	133839826	+	133836969	133839826	A5SS	0.5	50	50	ENSMUST00000074690.11	ENSMUSG00000012126.17	Ubxn11	chr4	protein_coding	UBX domain protein 11
chr4	133851230	133852377	+	133852265	133852377	A5SS	0.5	50	50	ENSMUST00000142442.8	ENSMUSG00000012126.17	Ubxn11	chr4	protein_coding	UBX domain protein 11
chr4	133829959;133843468	133843342;133850703	+	133829959;133836969	133835563;133850703	MXE	0.5	100	100	ENSMUST00000070246.9	ENSMUSG00000012126.17	Ubxn11	chr4	protein_coding	UBX domain protein 11
chr4	133836969	133839826	+	133836969	133850703	A3SS	0.5	50	50	ENSMUST00000070246.9	ENSMUSG00000012126.17	Ubxn11	chr4	protein_coding	UBX domain protein 11
chr4	133851230	133852377	+	133851230	133852145	A3SS&ES	0.5	50	50	ENSMUST00000139616.2	ENSMUSG00000012126.17	Ubxn11	chr4	protein_coding	UBX domain protein 11
chr4	133855117	133855927	-	133855117;133855396	133855229;133855927	ES	0.5	50	50	ENSMUST00000030651.9	ENSMUSG00000028843.9	Sh3bgrl3	chr4	protein_coding	SH3 domain binding glutamic acid-rich protein-like 3
chr4	133855117	133855927	-	133855396	133855927	3pMXE	0.5	50	50	ENSMUST00000136408.2	ENSMUSG00000028843.9	Sh3bgrl3	chr4	protein_coding	SH3 domain binding glutamic acid-rich protein-like 3
chr4	133883682;133892068	133891939;133894600	-	133883682	133894600	cassetteExon	0.5	100	100	ENSMUST00000040271.12	ENSMUSG00000037443.14	Cep85	chr4	protein_coding	centrosomal protein 85
chr4	133881701	133882988	-	133881707	133882988	A3SS	0.5	50	50	ENSMUST00000040271.12	ENSMUSG00000037443.14	Cep85	chr4	protein_coding	centrosomal protein 85
chr4	133859768	133859902	-	133859768	133861380	A5SS	0.5	50	50	ENSMUST00000040271.12	ENSMUSG00000037443.14	Cep85	chr4	protein_coding	centrosomal protein 85
chr4	133883682	133884122	-	133883682	133894600	A5SS	0.33	50	50	ENSMUST00000040271.12	ENSMUSG00000037443.14	Cep85	chr4	protein_coding	centrosomal protein 85
chr4	133883682	133891939	-	133883682	133884122	5pMXE	0.33	50	50	ENSMUST00000145531.2	ENSMUSG00000037443.14	Cep85	chr4	protein_coding	centrosomal protein 85
chr4	133883682	133894600	-	133892068	133894600	3pMXE	0.5	50	50	ENSMUST00000141384.2	ENSMUSG00000037443.14	Cep85	chr4	protein_coding	centrosomal protein 85
chr4	133953058	133953873	-	133948932	133953873	A3SS	0.5	50	50	ENSMUST00000055892.10	ENSMUSG00000048003.13	Catsper4	chr4	protein_coding	cation channel, sperm associated 4
chr4	133945250;133945817	133945452;133948831	-	133945250	133948831	cassetteExon	0.5	100	100	ENSMUST00000169381.8	ENSMUSG00000048003.13	Catsper4	chr4	protein_coding	cation channel, sperm associated 4
chr4	133959528	133959949	-	133959524	133959949	A3SS	0.5	50	50	ENSMUST00000030645.9	ENSMUSG00000028841.15	Cnksr1	chr4	protein_coding	connector enhancer of kinase suppressor of Ras 1
chr4	133961899	133961981	-	133961904	133961981	A3SS	0.5	50	50	ENSMUST00000030645.9	ENSMUSG00000028841.15	Cnksr1	chr4	protein_coding	connector enhancer of kinase suppressor of Ras 1
chr4	133971724	133971970	+	133971724	133972201	A3SS	0.33	50	50	ENSMUST00000135228.8	ENSMUSG00000086322.8	E130218I03Rik	chr4	protein_coding	RIKEN cDNA E130218I03 gene
chr4	133971724	133972218	+	133971724	133972201	A3SS	0.33	50	50	ENSMUST00000135228.8	ENSMUSG00000086322.8	E130218I03Rik	chr4	protein_coding	RIKEN cDNA E130218I03 gene
chr4	133971095	133971215	+	133971081	133971215	A5SS	0.33	50	50	ENSMUST00000135228.8	ENSMUSG00000086322.8	E130218I03Rik	chr4	protein_coding	RIKEN cDNA E130218I03 gene
chr4	133971133	133971215	+	133971081	133971215	A5SS	0.33	50	50	ENSMUST00000135228.8	ENSMUSG00000086322.8	E130218I03Rik	chr4	protein_coding	RIKEN cDNA E130218I03 gene
chr4	133971133	133971215	+	133971095	133971215	A5SS	0.33	50	50	ENSMUST00000144222.8	ENSMUSG00000086322.8	E130218I03Rik	chr4	protein_coding	RIKEN cDNA E130218I03 gene
chr4	133971724	133971970	+	133971724	133972218	A3SS	0.33	50	50	ENSMUST00000124452.8	ENSMUSG00000086322.8	E130218I03Rik	chr4	protein_coding	RIKEN cDNA E130218I03 gene
chr4	133979569	133980286	-	133979569	133981341	A5SS	0.5	50	50	ENSMUST00000060050.6	ENSMUSG00000050105.6	Grrp1	chr4	protein_coding	glycine/arginine rich protein 1
chr4	134011858	134014472	-	134011858;134013923	134013746;134014472	ES	0.5	50	50	ENSMUST00000105877.9	ENSMUSG00000050890.16	Pdik1l	chr4	protein_coding	PDLIM1 interacting kinase 1 like
chr4	134006852	134011557	-	134006427	134011557	A3SS	0.5	50	50	ENSMUST00000105877.9	ENSMUSG00000050890.16	Pdik1l	chr4	protein_coding	PDLIM1 interacting kinase 1 like
chr4	134006427	134011839	-	134006427	134011557	A5SS	0.5	50	50	ENSMUST00000105877.9	ENSMUSG00000050890.16	Pdik1l	chr4	protein_coding	PDLIM1 interacting kinase 1 like
chr4	134011858	134013746	-	134011858	134014938	A5SS	0.33	50	50	ENSMUST00000061234.14	ENSMUSG00000050890.16	Pdik1l	chr4	protein_coding	PDLIM1 interacting kinase 1 like
chr4	134011858	134014472	-	134011858	134014938	A5SS	0.33	50	50	ENSMUST00000061234.14	ENSMUSG00000050890.16	Pdik1l	chr4	protein_coding	PDLIM1 interacting kinase 1 like
chr4	134047446	134048494	+	134047111	134048494	A5SS	0.5	50	50	ENSMUST00000105875.8	ENSMUSG00000028834.14	Trim63	chr4	protein_coding	tripartite motif-containing 63
chr4	134055084	134056216	+	134055093	134056216	A5SS	0.5	50	50	ENSMUST00000105875.8	ENSMUSG00000028834.14	Trim63	chr4	protein_coding	tripartite motif-containing 63
chr4	134071527;134073360	134073214;134074651	+	134071527	134074651	cassetteExon	0.5	100	100	ENSMUST00000105873.8	ENSMUSG00000028836.15	Slc30a2	chr4	protein_coding	solute carrier family 30 (zinc transporter), member 2
chr4	134070863	134071319	+	134070647	134071319	A5SS	0.5	50	50	ENSMUST00000105873.8	ENSMUSG00000028836.15	Slc30a2	chr4	protein_coding	solute carrier family 30 (zinc transporter), member 2
chr4	134087932	134089894	-	134087932;134089718	134089612;134089894	ES	0.5	50	50	ENSMUST00000030643.3	ENSMUSG00000028838.12	Extl1	chr4	protein_coding	exostosin-like glycosyltransferase 1
chr4	134092299	134111021	-	134092299	134098269	5pMXE	0.33	50	50	ENSMUST00000030643.3	ENSMUSG00000028838.12	Extl1	chr4	protein_coding	exostosin-like glycosyltransferase 1
chr4	134092299	134092670	-	134092299	134098269	A5SS	0.33	50	50	ENSMUST00000030643.3	ENSMUSG00000028838.12	Extl1	chr4	protein_coding	exostosin-like glycosyltransferase 1
chr4	134092299	134092670	-	134092299	134111021	A5SS	0.33	50	50	ENSMUST00000132387.8	ENSMUSG00000028838.12	Extl1	chr4	protein_coding	exostosin-like glycosyltransferase 1
chr4	134131554	134138215	+	134131554;134132413	134132317;134138215	ES	0.33	50	50	ENSMUST00000105869.9	ENSMUSG00000037366.15	Pafah2	chr4	protein_coding	platelet-activating factor acetylhydrolase 2
chr4	134130415	134138090	+	134130415	134131404	A3SS&ES	0.33	50	50	ENSMUST00000105869.9	ENSMUSG00000037366.15	Pafah2	chr4	protein_coding	platelet-activating factor acetylhydrolase 2
chr4	134124897	134130281	+	134123735	134130281	A5SS	0.5	50	50	ENSMUST00000105869.9	ENSMUSG00000037366.15	Pafah2	chr4	protein_coding	platelet-activating factor acetylhydrolase 2
chr4	134130415	134138215	+	134130415;134131554	134131404;134138215	ES	0.33	50	50	ENSMUST00000140888.8	ENSMUSG00000037366.15	Pafah2	chr4	protein_coding	platelet-activating factor acetylhydrolase 2
chr4	134130415	134138215	+	134130415	134138090	A3SS	0.33	50	50	ENSMUST00000131337.8	ENSMUSG00000037366.15	Pafah2	chr4	protein_coding	platelet-activating factor acetylhydrolase 2
chr4	134124897	134138090	+	134130415	134138090	A5SS&ES	0.5	50	50	ENSMUST00000131337.8	ENSMUSG00000037366.15	Pafah2	chr4	protein_coding	platelet-activating factor acetylhydrolase 2
chr4	134124897;134130415	134130281;134138090	+	134124897	134138090	cassetteExon	0.5	100	100	ENSMUST00000148863.2	ENSMUSG00000037366.15	Pafah2	chr4	protein_coding	platelet-activating factor acetylhydrolase 2
chr4	134124897	134138090	+	134124897	134130281	A3SS&ES	0.5	50	50	ENSMUST00000105870.8	ENSMUSG00000037366.15	Pafah2	chr4	protein_coding	platelet-activating factor acetylhydrolase 2
chr4	134131554	134138215	+	134131554	134132317	3pMXE	0.5	50	50	ENSMUST00000132658.2	ENSMUSG00000037366.15	Pafah2	chr4	protein_coding	platelet-activating factor acetylhydrolase 2
chr4	134132413	134138215	+	134130415	134138215	A5SS	0.33	50	50	ENSMUST00000145626.2	ENSMUSG00000037366.15	Pafah2	chr4	protein_coding	platelet-activating factor acetylhydrolase 2
chr4	134195740	134197332	+	134195740	134197414	A3SS	0.5	50	50	ENSMUST00000030636.11	ENSMUSG00000028832.12	Stmn1	chr4	protein_coding	stathmin 1
chr4	134200306	134200633	+	134200306	134200643	A3SS	0.5	50	50	ENSMUST00000030636.11	ENSMUSG00000028832.12	Stmn1	chr4	protein_coding	stathmin 1
chr4	134224347;134227994	134227911;134234114	+	134224347	134234114	cassetteExon	0.5	100	100	ENSMUST00000081525.4	ENSMUSG00000037348.16	Paqr7	chr4	protein_coding	progestin and adipoQ receptor family member VII
chr4	134224347;134234028	134233834;134234114	+	134224347	134234114	cassetteExon	0.5	100	100	ENSMUST00000081525.4	ENSMUSG00000037348.16	Paqr7	chr4	protein_coding	progestin and adipoQ receptor family member VII
chr4	134224347;134227994	134227911;134234114	+	134224347;134234028	134233834;134234114	MXE	0.5	100	100	ENSMUST00000134506.8	ENSMUSG00000037348.16	Paqr7	chr4	protein_coding	progestin and adipoQ receptor family member VII
chr4	134227994;134234028	134233992;134234114	+	134227994	134234114	cassetteExon	0.5	100	100	ENSMUST00000136171.8	ENSMUSG00000037348.16	Paqr7	chr4	protein_coding	progestin and adipoQ receptor family member VII
chr4	134224347	134233834	+	134224347	134227911	A3SS&ES	0.33	50	50	ENSMUST00000125330.8	ENSMUSG00000037348.16	Paqr7	chr4	protein_coding	progestin and adipoQ receptor family member VII
chr4	134224558	134233992	+	134227994	134233992	A5SS&ES	0.5	50	50	ENSMUST00000125330.8	ENSMUSG00000037348.16	Paqr7	chr4	protein_coding	progestin and adipoQ receptor family member VII
chr4	134227994	134234114	+	134234028	134234114	A5SS&ES	0.5	50	50	ENSMUST00000155449.2	ENSMUSG00000037348.16	Paqr7	chr4	protein_coding	progestin and adipoQ receptor family member VII
chr4	134256612	134257586	-	134256721	134257586	A3SS	0.5	50	50	ENSMUST00000102550.10	ENSMUSG00000046671.19	Mtfr1l	chr4	protein_coding	mitochondrial fission regulator 1-like
chr4	134260063	134262216	-	134260063	134262393	A5SS	0.25	50	50	ENSMUST00000102550.10	ENSMUSG00000046671.19	Mtfr1l	chr4	protein_coding	mitochondrial fission regulator 1-like
chr4	134260063	134262557	-	134260063	134262393	A5SS	0.25	50	50	ENSMUST00000102550.10	ENSMUSG00000046671.19	Mtfr1l	chr4	protein_coding	mitochondrial fission regulator 1-like
chr4	134260063	134262561	-	134260063	134262393	A5SS	0.25	50	50	ENSMUST00000102550.10	ENSMUSG00000046671.19	Mtfr1l	chr4	protein_coding	mitochondrial fission regulator 1-like
chr4	134260063	134262216	-	134260063	134262561	A5SS	0.25	50	50	ENSMUST00000116279.10	ENSMUSG00000046671.19	Mtfr1l	chr4	protein_coding	mitochondrial fission regulator 1-like
chr4	134260063	134262557	-	134260063	134262561	A5SS	0.25	50	50	ENSMUST00000116279.10	ENSMUSG00000046671.19	Mtfr1l	chr4	protein_coding	mitochondrial fission regulator 1-like
chr4	134260063	134262216	-	134260063	134262557	A5SS	0.25	50	50	ENSMUST00000131613.8	ENSMUSG00000046671.19	Mtfr1l	chr4	protein_coding	mitochondrial fission regulator 1-like
chr4	134558038;134559266	134559158;134560509	-	134558038	134560509	cassetteExon	0.5	100	100	ENSMUST00000030628.15	ENSMUSG00000028826.15	Maco1	chr4	protein_coding	macoilin 1
chr4	134563760;134564345	134564078;134565160	-	134563760	134565160	cassetteExon	0.5	100	100	ENSMUST00000030628.15	ENSMUSG00000028826.15	Maco1	chr4	protein_coding	macoilin 1
chr4	134640572	134642200	-	134640506	134642200	A3SS	0.5	50	50	ENSMUST00000030626.12	ENSMUSG00000028822.12	Tmem50a	chr4	protein_coding	transmembrane protein 50A
chr4	134652318	134652604	+	134651793	134652604	A5SS	0.5	50	50	ENSMUST00000148900.8	ENSMUSG00000037266.19	Rsrp1	chr4	protein_coding	arginine/serine rich protein 1
chr4	134652743;134653132	134653088;134654046	+	134652743	134654046	cassetteExon	0.5	100	100	ENSMUST00000078084.7	ENSMUSG00000037266.19	Rsrp1	chr4	protein_coding	arginine/serine rich protein 1
chr4	134652743;134653461	134653088;134654046	+	134652743	134654046	cassetteExon	0.5	100	100	ENSMUST00000078084.7	ENSMUSG00000037266.19	Rsrp1	chr4	protein_coding	arginine/serine rich protein 1
chr4	134651220	134651394	+	134651220	134651291	A3SS&ES	0.5	50	50	ENSMUST00000125679.8	ENSMUSG00000037266.19	Rsrp1	chr4	protein_coding	arginine/serine rich protein 1
chr4	134652743	134654046	+	134652743	134653088	A3SS&ES	0.5	50	50	ENSMUST00000145364.8	ENSMUSG00000037266.19	Rsrp1	chr4	protein_coding	arginine/serine rich protein 1
chr4	134653132	134654046	+	134653132	134653337	A3SS	0.5	50	50	ENSMUST00000145364.8	ENSMUSG00000037266.19	Rsrp1	chr4	protein_coding	arginine/serine rich protein 1
chr4	134653132;134653461	134653337;134654046	+	134653132	134654046	cassetteExon	0.5	100	100	ENSMUST00000154837.8	ENSMUSG00000037266.19	Rsrp1	chr4	protein_coding	arginine/serine rich protein 1
chr4	134652743	134654046	+	134653461	134654046	5pMXE	0.33	50	50	ENSMUST00000149003.2	ENSMUSG00000037266.19	Rsrp1	chr4	protein_coding	arginine/serine rich protein 1
chr4	134653132	134654046	+	134653461	134654046	A5SS	0.33	50	50	ENSMUST00000149003.2	ENSMUSG00000037266.19	Rsrp1	chr4	protein_coding	arginine/serine rich protein 1
chr4	134880607	134882593	+	134880367	134882593	A5SS	0.25	50	50	ENSMUST00000056977.14	ENSMUSG00000070691.11	Runx3	chr4	protein_coding	runt related transcription factor 3
chr4	134881042	134882593	+	134880367	134882593	A5SS	0.25	50	50	ENSMUST00000056977.14	ENSMUSG00000070691.11	Runx3	chr4	protein_coding	runt related transcription factor 3
chr4	134882038	134882593	+	134880367	134882593	A5SS	0.25	50	50	ENSMUST00000056977.14	ENSMUSG00000070691.11	Runx3	chr4	protein_coding	runt related transcription factor 3
chr4	134881042	134882593	+	134880607	134882593	A5SS	0.25	50	50	ENSMUST00000137027.2	ENSMUSG00000070691.11	Runx3	chr4	protein_coding	runt related transcription factor 3
chr4	134882038	134882593	+	134880607	134882593	A5SS	0.25	50	50	ENSMUST00000137027.2	ENSMUSG00000070691.11	Runx3	chr4	protein_coding	runt related transcription factor 3
chr4	134882038	134882593	+	134881042	134882593	A5SS	0.25	50	50	ENSMUST00000140642.2	ENSMUSG00000070691.11	Runx3	chr4	protein_coding	runt related transcription factor 3
chr4	135054534;135056356	135056315;135056684	-	135054534	135056684	cassetteExon	0.5	100	100	ENSMUST00000105861.8	ENSMUSG00000028809.17	Srrm1	chr4	protein_coding	serine/arginine repetitive matrix 1
chr4	135065389;135065897	135065860;135067814	-	135065389	135067814	cassetteExon	0.5	100	100	ENSMUST00000105861.8	ENSMUSG00000028809.17	Srrm1	chr4	protein_coding	serine/arginine repetitive matrix 1
chr4	135071980;135072788	135072507;135074046	-	135071980	135074046	cassetteExon	0.5	100	100	ENSMUST00000105861.8	ENSMUSG00000028809.17	Srrm1	chr4	protein_coding	serine/arginine repetitive matrix 1
chr4	135051372	135052130	-	135051420	135052130	A3SS	0.5	50	50	ENSMUST00000105861.8	ENSMUSG00000028809.17	Srrm1	chr4	protein_coding	serine/arginine repetitive matrix 1
chr4	135067915	135068158	-	135067933	135068158	A3SS	0.33	50	50	ENSMUST00000105861.8	ENSMUSG00000028809.17	Srrm1	chr4	protein_coding	serine/arginine repetitive matrix 1
chr4	135067918	135068158	-	135067933	135068158	A3SS	0.33	50	50	ENSMUST00000105861.8	ENSMUSG00000028809.17	Srrm1	chr4	protein_coding	serine/arginine repetitive matrix 1
chr4	135069794	135071175	-	135069884	135071175	A3SS	0.5	50	50	ENSMUST00000105861.8	ENSMUSG00000028809.17	Srrm1	chr4	protein_coding	serine/arginine repetitive matrix 1
chr4	135073756	135074046	-	135071980	135074046	A3SS	0.33	50	50	ENSMUST00000105861.8	ENSMUSG00000028809.17	Srrm1	chr4	protein_coding	serine/arginine repetitive matrix 1
chr4	135067915	135068158	-	135067918	135068158	A3SS	0.33	50	50	ENSMUST00000084846.12	ENSMUSG00000028809.17	Srrm1	chr4	protein_coding	serine/arginine repetitive matrix 1
chr4	135065389	135067814	-	135065897	135067814	3pMXE	0.5	50	50	ENSMUST00000154788.2	ENSMUSG00000028809.17	Srrm1	chr4	protein_coding	serine/arginine repetitive matrix 1
chr4	135073756	135074046	-	135072788	135074046	A3SS	0.33	50	50	ENSMUST00000136409.2	ENSMUSG00000028809.17	Srrm1	chr4	protein_coding	serine/arginine repetitive matrix 1
chr4	135108149	135125194	-	135108149	135112841	5pMXE	0.5	50	50	ENSMUST00000105858.8	ENSMUSG00000043924.17	Ncmap	chr4	protein_coding	noncompact myelin associated protein
chr4	135104384;135107603	135107433;135107963	-	135104384	135107963	cassetteExon	0.5	100	100	ENSMUST00000105858.8	ENSMUSG00000043924.17	Ncmap	chr4	protein_coding	noncompact myelin associated protein
chr4	135104387	135107963	-	135104384	135107963	A3SS	0.33	50	50	ENSMUST00000105858.8	ENSMUSG00000043924.17	Ncmap	chr4	protein_coding	noncompact myelin associated protein
chr4	135104387	135112841	-	135108149	135112841	A3SS&ES	0.5	50	50	ENSMUST00000105858.8	ENSMUSG00000043924.17	Ncmap	chr4	protein_coding	noncompact myelin associated protein
chr4	135099272	135101925	-	135099272	135104302	A5SS	0.5	50	50	ENSMUST00000105858.8	ENSMUSG00000043924.17	Ncmap	chr4	protein_coding	noncompact myelin associated protein
chr4	135107603	135107963	-	135104387	135107963	A3SS	0.33	50	50	ENSMUST00000105859.8	ENSMUSG00000043924.17	Ncmap	chr4	protein_coding	noncompact myelin associated protein
chr4	135104387	135112841	-	135104387	135107963	A5SS&ES	0.5	50	50	ENSMUST00000105859.8	ENSMUSG00000043924.17	Ncmap	chr4	protein_coding	noncompact myelin associated protein
chr4	135104387;135108149	135107963;135112841	-	135104387	135112841	cassetteExon	0.5	100	100	ENSMUST00000064481.15	ENSMUSG00000043924.17	Ncmap	chr4	protein_coding	noncompact myelin associated protein
chr4	135143909	135145691	-	135139801	135145691	A3SS	0.5	50	50	ENSMUST00000132654.8	ENSMUSG00000059713.13	Rcan3	chr4	protein_coding	regulator of calcineurin 3
chr4	135152753	135160923	-	135152756	135160923	A3SS	0.5	50	50	ENSMUST00000030606.14	ENSMUSG00000059713.13	Rcan3	chr4	protein_coding	regulator of calcineurin 3
chr4	135218593	135222034	-	135218593	135221741	5pMXE	0.33	50	50	ENSMUST00000183807.8	ENSMUSG00000028803.19	Nipal3	chr4	protein_coding	NIPA-like domain containing 3
chr4	135218593	135222302	-	135218593	135221741	5pMXE	0.33	50	50	ENSMUST00000183807.8	ENSMUSG00000028803.19	Nipal3	chr4	protein_coding	NIPA-like domain containing 3
chr4	135179883	135191097	-	135174716	135191097	A3SS	0.33	50	50	ENSMUST00000183807.8	ENSMUSG00000028803.19	Nipal3	chr4	protein_coding	NIPA-like domain containing 3
chr4	135182215	135191097	-	135174716	135191097	A3SS	0.33	50	50	ENSMUST00000183807.8	ENSMUSG00000028803.19	Nipal3	chr4	protein_coding	NIPA-like domain containing 3
chr4	135179883;135182215	135182184;135191097	-	135179883	135191097	cassetteExon	0.5	100	100	ENSMUST00000102549.10	ENSMUSG00000028803.19	Nipal3	chr4	protein_coding	NIPA-like domain containing 3
chr4	135179883	135180777	-	135179883	135191097	A5SS	0.33	50	50	ENSMUST00000102549.10	ENSMUSG00000028803.19	Nipal3	chr4	protein_coding	NIPA-like domain containing 3
chr4	135179883;135180858	135180777;135182184	-	135179883	135182184	cassetteExon	0.5	100	100	ENSMUST00000140982.2	ENSMUSG00000028803.19	Nipal3	chr4	protein_coding	NIPA-like domain containing 3
chr4	135179883	135191097	-	135179883	135182184	5pMXE	0.33	50	50	ENSMUST00000148023.3	ENSMUSG00000028803.19	Nipal3	chr4	protein_coding	NIPA-like domain containing 3
chr4	135218593	135222302	-	135218593	135222034	5pMXE	0.33	50	50	ENSMUST00000145020.8	ENSMUSG00000028803.19	Nipal3	chr4	protein_coding	NIPA-like domain containing 3
chr4	135233807	135235249	+	135222357	135235249	A5SS	0.5	50	50	ENSMUST00000153891.8	ENSMUSG00000028801.15	Stpg1	chr4	protein_coding	sperm tail PG rich repeat containing 1
chr4	135223457	135233676	+	135231390	135233676	A5SS&ES	0.5	50	50	ENSMUST00000123221.2	ENSMUSG00000028801.15	Stpg1	chr4	protein_coding	sperm tail PG rich repeat containing 1
chr4	135354356	135355067	+	135354356;135354753	135354625;135355067	ES	0.5	50	50	ENSMUST00000153347.2	ENSMUSG00000086788.3	1700029M20Rik	chr4	lncRNA	RIKEN cDNA 1700029M20 gene
chr4	135354356	135355067	+	135354753	135355067	5pMXE	0.5	50	50	ENSMUST00000148529.2	ENSMUSG00000086788.3	1700029M20Rik	chr4	lncRNA	RIKEN cDNA 1700029M20 gene
chr4	135590887	135594437	+	135590887	135591040	3pMXE	0.5	50	50	ENSMUST00000105853.10	ENSMUSG00000028676.18	Srsf10	chr4	protein_coding	serine and arginine-rich splicing factor 10
chr4	135590513	135590837	+	135590513	135590834	A3SS	0.5	50	50	ENSMUST00000105853.10	ENSMUSG00000028676.18	Srsf10	chr4	protein_coding	serine and arginine-rich splicing factor 10
chr4	135600410	135600588	-	135600410	135600985	A5SS	0.5	50	50	ENSMUST00000030436.12	ENSMUSG00000028675.13	Pnrc2	chr4	protein_coding	proline-rich nuclear receptor coactivator 2
chr4	135639243	135643878	+	135622930	135643878	A5SS	0.5	50	50	ENSMUST00000097843.9	ENSMUSG00000062585.12	Cnr2	chr4	protein_coding	cannabinoid receptor 2 (macrophage)
chr4	135679789;135680744	135680600;135681168	+	135679789	135681168	cassetteExon	0.5	100	100	ENSMUST00000030432.8	ENSMUSG00000028672.14	Hmgcl	chr4	protein_coding	3-hydroxy-3-methylglutaryl-Coenzyme A lyase
chr4	135676158	135677861	+	135673851	135677861	A5SS	0.5	50	50	ENSMUST00000030432.8	ENSMUSG00000028672.14	Hmgcl	chr4	protein_coding	3-hydroxy-3-methylglutaryl-Coenzyme A lyase
chr4	135687139	135687288	+	135686097	135687288	A5SS	0.5	50	50	ENSMUST00000030432.8	ENSMUSG00000028672.14	Hmgcl	chr4	protein_coding	3-hydroxy-3-methylglutaryl-Coenzyme A lyase
chr4	135691099	135692537	+	135691099	135692645	A3SS	0.5	50	50	ENSMUST00000102541.10	ENSMUSG00000028671.17	Gale	chr4	protein_coding	galactose-4-epimerase, UDP
chr4	135693427	135693565	+	135693427	135693681	A3SS	0.5	50	50	ENSMUST00000102541.10	ENSMUSG00000028671.17	Gale	chr4	protein_coding	galactose-4-epimerase, UDP
chr4	135691407	135692645	+	135691099	135692645	A5SS	0.5	50	50	ENSMUST00000102541.10	ENSMUSG00000028671.17	Gale	chr4	protein_coding	galactose-4-epimerase, UDP
chr4	135698276	135699829	-	135698276	135699170	5pMXE	0.5	50	50	ENSMUST00000105852.8	ENSMUSG00000028670.15	Lypla2	chr4	protein_coding	lysophospholipase 2
chr4	135706212	135713114	-	135706212	135713252	A5SS	0.5	50	50	ENSMUST00000105851.9	ENSMUSG00000028669.16	Pithd1	chr4	protein_coding	PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1
chr4	135713329	135713562	-	135713329	135713703	A5SS	0.5	50	50	ENSMUST00000105851.9	ENSMUSG00000028669.16	Pithd1	chr4	protein_coding	PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1
chr4	135713746	135714179	-	135713746	135714249	A5SS	0.5	50	50	ENSMUST00000105851.9	ENSMUSG00000028669.16	Pithd1	chr4	protein_coding	PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1
chr4	135713746	135714179	-	135713777	135714179	A3SS	0.5	50	50	ENSMUST00000123404.2	ENSMUSG00000028669.16	Pithd1	chr4	protein_coding	PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1
chr4	135778613	135778925	-	135775164	135778925	A3SS	0.5	50	50	ENSMUST00000137580.8	ENSMUSG00000059291.16	Rpl11	chr4	protein_coding	ribosomal protein L11
chr4	135779027	135779878	-	135779031	135779878	A3SS	0.5	50	50	ENSMUST00000137580.8	ENSMUSG00000059291.16	Rpl11	chr4	protein_coding	ribosomal protein L11
chr4	135780028	135780281	-	135780028	135780659	A5SS	0.5	50	50	ENSMUST00000102536.11	ENSMUSG00000059291.16	Rpl11	chr4	protein_coding	ribosomal protein L11
chr4	135908236	135908597	+	135907888	135908597	A5SS	0.5	50	50	ENSMUST00000061721.6	ENSMUSG00000018983.10	E2f2	chr4	protein_coding	E2F transcription factor 2
chr4	135975428	135981057	+	135975116	135981057	A5SS	0.5	50	50	ENSMUST00000136812.2	ENSMUSG00000001604.15	Tcea3	chr4	protein_coding	transcription elongation factor A (SII), 3
chr4	135981953	135982461	+	135981881	135982461	A5SS	0.5	50	50	ENSMUST00000136812.2	ENSMUSG00000001604.15	Tcea3	chr4	protein_coding	transcription elongation factor A (SII), 3
chr4	136012406	136013218	+	136012406	136013738	A3SS	0.33	50	50	ENSMUST00000144217.8	ENSMUSG00000051351.15	Zfp46	chr4	protein_coding	zinc finger protein 46
chr4	136012406	136014500	+	136012406	136013738	A3SS&ES	0.33	50	50	ENSMUST00000144217.8	ENSMUSG00000051351.15	Zfp46	chr4	protein_coding	zinc finger protein 46
chr4	136013792	136014500	+	136013792	136014383	A3SS	0.5	50	50	ENSMUST00000144217.8	ENSMUSG00000051351.15	Zfp46	chr4	protein_coding	zinc finger protein 46
chr4	136012406;136013792	136013738;136014500	+	136012406	136014500	cassetteExon	0.5	100	100	ENSMUST00000130223.8	ENSMUSG00000051351.15	Zfp46	chr4	protein_coding	zinc finger protein 46
chr4	136012406	136013218	+	136012406	136014500	A3SS	0.33	50	50	ENSMUST00000130223.8	ENSMUSG00000051351.15	Zfp46	chr4	protein_coding	zinc finger protein 46
chr4	136012406	136014500	+	136013792	136014500	5pMXE	0.5	50	50	ENSMUST00000130658.2	ENSMUSG00000051351.15	Zfp46	chr4	protein_coding	zinc finger protein 46
chr4	136038400;136041566	136041398;136043672	+	136038400	136043672	cassetteExon	0.5	100	100	ENSMUST00000131671.8	ENSMUSG00000066037.15	Hnrnpr	chr4	protein_coding	heterogeneous nuclear ribonucleoprotein R
chr4	136038400;136041566	136041401;136043672	+	136038400	136043672	cassetteExon	0.5	100	100	ENSMUST00000131671.8	ENSMUSG00000066037.15	Hnrnpr	chr4	protein_coding	heterogeneous nuclear ribonucleoprotein R
chr4	136039058	136043672	+	136038400	136043672	A5SS	0.33	50	50	ENSMUST00000131671.8	ENSMUSG00000066037.15	Hnrnpr	chr4	protein_coding	heterogeneous nuclear ribonucleoprotein R
chr4	136043795	136044395	+	136043790	136044395	A5SS	0.5	50	50	ENSMUST00000131671.8	ENSMUSG00000066037.15	Hnrnpr	chr4	protein_coding	heterogeneous nuclear ribonucleoprotein R
chr4	136038400	136041398	+	136038400	136041401	A3SS	0.33	50	50	ENSMUST00000105850.8	ENSMUSG00000066037.15	Hnrnpr	chr4	protein_coding	heterogeneous nuclear ribonucleoprotein R
chr4	136039058	136041401	+	136038400	136041401	A5SS	0.5	50	50	ENSMUST00000105850.8	ENSMUSG00000066037.15	Hnrnpr	chr4	protein_coding	heterogeneous nuclear ribonucleoprotein R
chr4	136039058	136043672	+	136041566	136043672	A5SS&ES	0.33	50	50	ENSMUST00000105850.8	ENSMUSG00000066037.15	Hnrnpr	chr4	protein_coding	heterogeneous nuclear ribonucleoprotein R
chr4	136039058	136041398	+	136038400	136041398	A5SS	0.5	50	50	ENSMUST00000148843.10	ENSMUSG00000066037.15	Hnrnpr	chr4	protein_coding	heterogeneous nuclear ribonucleoprotein R
chr4	136039058;136041566	136041398;136043672	+	136039058	136043672	cassetteExon	0.5	100	100	ENSMUST00000125696.8	ENSMUSG00000066037.15	Hnrnpr	chr4	protein_coding	heterogeneous nuclear ribonucleoprotein R
chr4	136039058;136041566	136041401;136043672	+	136039058	136043672	cassetteExon	0.5	100	100	ENSMUST00000125696.8	ENSMUSG00000066037.15	Hnrnpr	chr4	protein_coding	heterogeneous nuclear ribonucleoprotein R
chr4	136039058	136041401	+	136039058	136041398	A3SS	0.33	50	50	ENSMUST00000134524.3	ENSMUSG00000066037.15	Hnrnpr	chr4	protein_coding	heterogeneous nuclear ribonucleoprotein R
chr4	136151086;136151440	136151283;136169058	+	136151086	136169058	cassetteExon	0.5	100	100	ENSMUST00000088677.5	ENSMUSG00000070687.12	Htr1d	chr4	protein_coding	5-hydroxytryptamine (serotonin) receptor 1D
chr4	136152061	136169058	+	136151086	136169058	A5SS	0.33	50	50	ENSMUST00000088677.5	ENSMUSG00000070687.12	Htr1d	chr4	protein_coding	5-hydroxytryptamine (serotonin) receptor 1D
chr4	136150908	136151283	+	136151086	136151283	A5SS	0.5	50	50	ENSMUST00000121571.8	ENSMUSG00000070687.12	Htr1d	chr4	protein_coding	5-hydroxytryptamine (serotonin) receptor 1D
chr4	136152061	136169058	+	136151440	136169058	A5SS	0.33	50	50	ENSMUST00000121571.8	ENSMUSG00000070687.12	Htr1d	chr4	protein_coding	5-hydroxytryptamine (serotonin) receptor 1D
chr4	136151086	136169058	+	136151440	136169058	A5SS&ES	0.33	50	50	ENSMUST00000117699.2	ENSMUSG00000070687.12	Htr1d	chr4	protein_coding	5-hydroxytryptamine (serotonin) receptor 1D
chr4	136248754	136267667	+	136248754;136266527	136266436;136267667	ES	0.33	50	50	ENSMUST00000170102.8	ENSMUSG00000001089.15	Luzp1	chr4	protein_coding	leucine zipper protein 1
chr4	136197197	136267667	+	136266527	136267667	A5SS&ES	0.33	50	50	ENSMUST00000170102.8	ENSMUSG00000001089.15	Luzp1	chr4	protein_coding	leucine zipper protein 1
chr4	136197197	136267667	+	136248754	136267667	A5SS&ES	0.33	50	50	ENSMUST00000105849.9	ENSMUSG00000001089.15	Luzp1	chr4	protein_coding	leucine zipper protein 1
chr4	136272713	136281815	+	136272713	136273308	3pMXE	0.5	50	50	ENSMUST00000063021.7	ENSMUSG00000001089.15	Luzp1	chr4	protein_coding	leucine zipper protein 1
chr4	136282616;136284754	136284665;136284953	-	136282616	136284953	cassetteExon	0.5	100	100	ENSMUST00000116273.9	ENSMUSG00000036940.16	Kdm1a	chr4	protein_coding	lysine (K)-specific demethylase 1A
chr4	136288471;136290760	136290749;136295884	-	136288471	136295884	cassetteExon	0.5	100	100	ENSMUST00000116273.9	ENSMUSG00000036940.16	Kdm1a	chr4	protein_coding	lysine (K)-specific demethylase 1A
chr4	136304515;136309410	136309351;136320276	-	136304515	136320276	cassetteExon	0.5	100	100	ENSMUST00000116273.9	ENSMUSG00000036940.16	Kdm1a	chr4	protein_coding	lysine (K)-specific demethylase 1A
chr4	136288471	136295884	-	136286618	136295884	A3SS	0.33	50	50	ENSMUST00000046846.14	ENSMUSG00000036940.16	Kdm1a	chr4	protein_coding	lysine (K)-specific demethylase 1A
chr4	136290760	136295884	-	136286618	136295884	A3SS	0.33	50	50	ENSMUST00000046846.14	ENSMUSG00000036940.16	Kdm1a	chr4	protein_coding	lysine (K)-specific demethylase 1A
chr4	136286618	136287634	-	136286618	136295884	A5SS	0.5	50	50	ENSMUST00000046846.14	ENSMUSG00000036940.16	Kdm1a	chr4	protein_coding	lysine (K)-specific demethylase 1A
chr4	136399821	136400574	-	136399818	136400574	A3SS	0.5	50	50	ENSMUST00000105845.9	ENSMUSG00000028664.15	Ephb2	chr4	protein_coding	Eph receptor B2
chr4	136402844	136411231	-	136402841	136411231	A3SS	0.5	50	50	ENSMUST00000105845.9	ENSMUSG00000028664.15	Ephb2	chr4	protein_coding	Eph receptor B2
chr4	136716073	136718809	-	136716076	136718809	A3SS	0.5	50	50	ENSMUST00000049583.8	ENSMUSG00000060862.11	Zbtb40	chr4	protein_coding	zinc finger and BTB domain containing 40
chr4	137049930	137056024	-	137048503	137056024	A3SS	0.5	50	50	ENSMUST00000051477.13	ENSMUSG00000006699.18	Cdc42	chr4	protein_coding	cell division cycle 42
chr4	137249961	137251163	+	137249961	137256116	A3SS	0.5	50	50	ENSMUST00000030547.15	ENSMUSG00000028763.19	Hspg2	chr4	protein_coding	perlecan (heparan sulfate proteoglycan 2)
chr4	137267417	137267506	+	137267417	137267524	A3SS	0.5	50	50	ENSMUST00000030547.15	ENSMUSG00000028763.19	Hspg2	chr4	protein_coding	perlecan (heparan sulfate proteoglycan 2)
chr4	137253732	137256116	+	137249961	137256116	A5SS	0.5	50	50	ENSMUST00000030547.15	ENSMUSG00000028763.19	Hspg2	chr4	protein_coding	perlecan (heparan sulfate proteoglycan 2)
chr4	137301954	137305530	-	137301954	137302374	5pMXE	0.5	50	50	ENSMUST00000238480.2	ENSMUSG00000094035.4	Ldlrad2	chr4	protein_coding	low density lipoprotein receptor class A domain containing 2
chr4	137362319;137364298	137364245;137365071	+	137362319	137365071	cassetteExon	0.5	100	100	ENSMUST00000105840.8	ENSMUSG00000043411.16	Usp48	chr4	protein_coding	ubiquitin specific peptidase 48
chr4	137341172	137343027	+	137341172	137343024	A3SS	0.5	50	50	ENSMUST00000105840.8	ENSMUSG00000043411.16	Usp48	chr4	protein_coding	ubiquitin specific peptidase 48
chr4	137350699	137352471	+	137350699	137352468	A3SS	0.5	50	50	ENSMUST00000105840.8	ENSMUSG00000043411.16	Usp48	chr4	protein_coding	ubiquitin specific peptidase 48
chr4	137362319	137365076	+	137362319	137365071	A3SS	0.25	50	50	ENSMUST00000105840.8	ENSMUSG00000043411.16	Usp48	chr4	protein_coding	ubiquitin specific peptidase 48
chr4	137377729	137379848	+	137377729	137380269	A3SS	0.5	50	50	ENSMUST00000105840.8	ENSMUSG00000043411.16	Usp48	chr4	protein_coding	ubiquitin specific peptidase 48
chr4	137380317	137382404	+	137380317	137382534	A3SS	0.33	50	50	ENSMUST00000105840.8	ENSMUSG00000043411.16	Usp48	chr4	protein_coding	ubiquitin specific peptidase 48
chr4	137380317	137382470	+	137380317	137382534	A3SS	0.33	50	50	ENSMUST00000105840.8	ENSMUSG00000043411.16	Usp48	chr4	protein_coding	ubiquitin specific peptidase 48
chr4	137347285	137348373	+	137343818	137348373	A5SS	0.5	50	50	ENSMUST00000105840.8	ENSMUSG00000043411.16	Usp48	chr4	protein_coding	ubiquitin specific peptidase 48
chr4	137350826	137352471	+	137350699	137352471	A5SS	0.5	50	50	ENSMUST00000105839.8	ENSMUSG00000043411.16	Usp48	chr4	protein_coding	ubiquitin specific peptidase 48
chr4	137362319	137365076	+	137362319	137364245	A3SS&ES	0.25	50	50	ENSMUST00000055131.13	ENSMUSG00000043411.16	Usp48	chr4	protein_coding	ubiquitin specific peptidase 48
chr4	137362319	137364245	+	137362319	137371654	A3SS	0.25	50	50	ENSMUST00000152985.2	ENSMUSG00000043411.16	Usp48	chr4	protein_coding	ubiquitin specific peptidase 48
chr4	137362319	137365071	+	137362319	137371654	A3SS	0.25	50	50	ENSMUST00000152985.2	ENSMUSG00000043411.16	Usp48	chr4	protein_coding	ubiquitin specific peptidase 48
chr4	137362319	137365076	+	137362319	137371654	A3SS	0.25	50	50	ENSMUST00000152985.2	ENSMUSG00000043411.16	Usp48	chr4	protein_coding	ubiquitin specific peptidase 48
chr4	137366621	137371654	+	137362319	137371654	A5SS	0.33	50	50	ENSMUST00000152985.2	ENSMUSG00000043411.16	Usp48	chr4	protein_coding	ubiquitin specific peptidase 48
chr4	137360776	137361144	+	137360776	137371654	A3SS	0.5	50	50	ENSMUST00000141426.8	ENSMUSG00000043411.16	Usp48	chr4	protein_coding	ubiquitin specific peptidase 48
chr4	137362319	137371654	+	137360776	137371654	A5SS	0.33	50	50	ENSMUST00000141426.8	ENSMUSG00000043411.16	Usp48	chr4	protein_coding	ubiquitin specific peptidase 48
chr4	137366621	137371654	+	137360776	137371654	A5SS	0.33	50	50	ENSMUST00000141426.8	ENSMUSG00000043411.16	Usp48	chr4	protein_coding	ubiquitin specific peptidase 48
chr4	137362319	137365071	+	137362319	137364245	3pMXE	0.25	50	50	ENSMUST00000131755.2	ENSMUSG00000043411.16	Usp48	chr4	protein_coding	ubiquitin specific peptidase 48
chr4	137380317	137382470	+	137380317	137382404	A3SS	0.33	50	50	ENSMUST00000151807.8	ENSMUSG00000043411.16	Usp48	chr4	protein_coding	ubiquitin specific peptidase 48
chr4	137409066	137431385	+	137392155	137431385	A5SS	0.25	50	50	ENSMUST00000139831.8	ENSMUSG00000041351.17	Rap1gap	chr4	protein_coding	Rap1 GTPase-activating protein
chr4	137410807	137431385	+	137392155	137431385	A5SS	0.25	50	50	ENSMUST00000139831.8	ENSMUSG00000041351.17	Rap1gap	chr4	protein_coding	Rap1 GTPase-activating protein
chr4	137414845	137431385	+	137392155	137431385	A5SS	0.25	50	50	ENSMUST00000139831.8	ENSMUSG00000041351.17	Rap1gap	chr4	protein_coding	Rap1 GTPase-activating protein
chr4	137434971	137437198	+	137431478	137437198	A5SS	0.5	50	50	ENSMUST00000139831.8	ENSMUSG00000041351.17	Rap1gap	chr4	protein_coding	Rap1 GTPase-activating protein
chr4	137437973	137443053	+	137437973	137438959	3pMXE	0.5	50	50	ENSMUST00000156683.8	ENSMUSG00000041351.17	Rap1gap	chr4	protein_coding	Rap1 GTPase-activating protein
chr4	137409066;137410807	137410772;137431385	+	137409066	137431385	cassetteExon	0.5	100	100	ENSMUST00000152567.8	ENSMUSG00000041351.17	Rap1gap	chr4	protein_coding	Rap1 GTPase-activating protein
chr4	137414845	137431385	+	137409066	137431385	A5SS	0.25	50	50	ENSMUST00000152567.8	ENSMUSG00000041351.17	Rap1gap	chr4	protein_coding	Rap1 GTPase-activating protein
chr4	137414845	137431385	+	137410807	137431385	A5SS	0.33	50	50	ENSMUST00000150928.8	ENSMUSG00000041351.17	Rap1gap	chr4	protein_coding	Rap1 GTPase-activating protein
chr4	137439511	137443053	+	137437973	137443053	A5SS	0.5	50	50	ENSMUST00000150928.8	ENSMUSG00000041351.17	Rap1gap	chr4	protein_coding	Rap1 GTPase-activating protein
chr4	137449268;137451134	137451057;137452003	+	137449268	137452003	cassetteExon	0.5	100	100	ENSMUST00000105835.8	ENSMUSG00000041351.17	Rap1gap	chr4	protein_coding	Rap1 GTPase-activating protein
chr4	137454386	137454988	+	137454386	137455041	A3SS	0.5	50	50	ENSMUST00000105835.8	ENSMUSG00000041351.17	Rap1gap	chr4	protein_coding	Rap1 GTPase-activating protein
chr4	137455090	137455571	+	137455090	137455540	A3SS	0.5	50	50	ENSMUST00000105835.8	ENSMUSG00000041351.17	Rap1gap	chr4	protein_coding	Rap1 GTPase-activating protein
chr4	137455879	137456188	+	137455879	137456186	A3SS	0.5	50	50	ENSMUST00000105835.8	ENSMUSG00000041351.17	Rap1gap	chr4	protein_coding	Rap1 GTPase-activating protein
chr4	137473838	137473961	-	137473838	137475070	A5SS	0.5	50	50	ENSMUST00000030551.11	ENSMUSG00000028766.11	Alpl	chr4	protein_coding	alkaline phosphatase, liver/bone/kidney
chr4	137486043	137493619	-	137486043	137523553	A5SS	0.14	50	50	ENSMUST00000030551.11	ENSMUSG00000028766.11	Alpl	chr4	protein_coding	alkaline phosphatase, liver/bone/kidney
chr4	137486043	137496833	-	137486043	137523553	A5SS	0.14	50	50	ENSMUST00000030551.11	ENSMUSG00000028766.11	Alpl	chr4	protein_coding	alkaline phosphatase, liver/bone/kidney
chr4	137486043	137496841	-	137486043	137523553	A5SS	0.14	50	50	ENSMUST00000030551.11	ENSMUSG00000028766.11	Alpl	chr4	protein_coding	alkaline phosphatase, liver/bone/kidney
chr4	137486043	137509472	-	137486043	137523553	A5SS	0.14	50	50	ENSMUST00000030551.11	ENSMUSG00000028766.11	Alpl	chr4	protein_coding	alkaline phosphatase, liver/bone/kidney
chr4	137486043	137512607	-	137486043	137523553	A5SS	0.14	50	50	ENSMUST00000030551.11	ENSMUSG00000028766.11	Alpl	chr4	protein_coding	alkaline phosphatase, liver/bone/kidney
chr4	137486043	137523104	-	137486043	137523553	A5SS	0.14	50	50	ENSMUST00000030551.11	ENSMUSG00000028766.11	Alpl	chr4	protein_coding	alkaline phosphatase, liver/bone/kidney
chr4	137486043	137496833	-	137486043	137493619	5pMXE	0.14	50	50	ENSMUST00000139951.8	ENSMUSG00000028766.11	Alpl	chr4	protein_coding	alkaline phosphatase, liver/bone/kidney
chr4	137486043	137496841	-	137486043	137493619	5pMXE	0.14	50	50	ENSMUST00000139951.8	ENSMUSG00000028766.11	Alpl	chr4	protein_coding	alkaline phosphatase, liver/bone/kidney
chr4	137486043	137509472	-	137486043	137493619	5pMXE	0.14	50	50	ENSMUST00000139951.8	ENSMUSG00000028766.11	Alpl	chr4	protein_coding	alkaline phosphatase, liver/bone/kidney
chr4	137486043	137512607	-	137486043	137493619	5pMXE	0.14	50	50	ENSMUST00000139951.8	ENSMUSG00000028766.11	Alpl	chr4	protein_coding	alkaline phosphatase, liver/bone/kidney
chr4	137486043	137523104	-	137486043	137493619	5pMXE	0.14	50	50	ENSMUST00000139951.8	ENSMUSG00000028766.11	Alpl	chr4	protein_coding	alkaline phosphatase, liver/bone/kidney
chr4	137486043	137512607	-	137486043	137509472	5pMXE	0.14	50	50	ENSMUST00000153588.8	ENSMUSG00000028766.11	Alpl	chr4	protein_coding	alkaline phosphatase, liver/bone/kidney
chr4	137486043	137523104	-	137486043	137509472	5pMXE	0.14	50	50	ENSMUST00000153588.8	ENSMUSG00000028766.11	Alpl	chr4	protein_coding	alkaline phosphatase, liver/bone/kidney
chr4	137486043	137496833	-	137486043	137509472	A5SS	0.14	50	50	ENSMUST00000153588.8	ENSMUSG00000028766.11	Alpl	chr4	protein_coding	alkaline phosphatase, liver/bone/kidney
chr4	137486043	137496841	-	137486043	137509472	A5SS	0.14	50	50	ENSMUST00000153588.8	ENSMUSG00000028766.11	Alpl	chr4	protein_coding	alkaline phosphatase, liver/bone/kidney
chr4	137486043	137523104	-	137486043	137512607	5pMXE	0.14	50	50	ENSMUST00000133473.2	ENSMUSG00000028766.11	Alpl	chr4	protein_coding	alkaline phosphatase, liver/bone/kidney
chr4	137486043	137496833	-	137486043	137512607	A5SS	0.14	50	50	ENSMUST00000133473.2	ENSMUSG00000028766.11	Alpl	chr4	protein_coding	alkaline phosphatase, liver/bone/kidney
chr4	137486043	137496841	-	137486043	137512607	A5SS	0.14	50	50	ENSMUST00000133473.2	ENSMUSG00000028766.11	Alpl	chr4	protein_coding	alkaline phosphatase, liver/bone/kidney
chr4	137486043	137496833	-	137486043	137523104	A5SS	0.14	50	50	ENSMUST00000138463.2	ENSMUSG00000028766.11	Alpl	chr4	protein_coding	alkaline phosphatase, liver/bone/kidney
chr4	137486043	137496841	-	137486043	137523104	A5SS	0.14	50	50	ENSMUST00000138463.2	ENSMUSG00000028766.11	Alpl	chr4	protein_coding	alkaline phosphatase, liver/bone/kidney
chr4	137486043	137496841	-	137486043	137496833	A5SS	0.14	50	50	ENSMUST00000133566.8	ENSMUSG00000028766.11	Alpl	chr4	protein_coding	alkaline phosphatase, liver/bone/kidney
chr4	137589692	137641079	+	137589692;137632466	137632381;137641079	ES	0.33	50	50	ENSMUST00000102518.10	ENSMUSG00000057530.15	Ece1	chr4	protein_coding	endothelin converting enzyme 1
chr4	137640940	137641079	+	137632466	137641079	A5SS	0.33	50	50	ENSMUST00000102518.10	ENSMUSG00000057530.15	Ece1	chr4	protein_coding	endothelin converting enzyme 1
chr4	137640940	137641079	+	137589692	137641079	A5SS	0.33	50	50	ENSMUST00000130407.3	ENSMUSG00000057530.15	Ece1	chr4	protein_coding	endothelin converting enzyme 1
chr4	137610209	137611124	-	137610209	137610539	5pMXE	0.5	50	50	ENSMUST00000152368.2	ENSMUSG00000085823.8	Gm13012	chr4	lncRNA	predicted gene 13012
chr4	137772729	137810204	+	137772729;137785388	137785260;137810204	ES	0.5	50	50	ENSMUST00000139759.8	ENSMUSG00000028760.17	Eif4g3	chr4	protein_coding	eukaryotic translation initiation factor 4 gamma, 3
chr4	137810299	137824063	+	137810299;137823240	137823220;137824063	ES	0.2	50	50	ENSMUST00000139759.8	ENSMUSG00000028760.17	Eif4g3	chr4	protein_coding	eukaryotic translation initiation factor 4 gamma, 3
chr4	137810299;137811681	137811568;137824063	+	137810299;137823240	137823220;137824063	MXE	0.5	100	100	ENSMUST00000139759.8	ENSMUSG00000028760.17	Eif4g3	chr4	protein_coding	eukaryotic translation initiation factor 4 gamma, 3
chr4	137810299;137814876	137814844;137823220	+	137810299	137823220	cassetteExon	0.5	100	100	ENSMUST00000139759.8	ENSMUSG00000028760.17	Eif4g3	chr4	protein_coding	eukaryotic translation initiation factor 4 gamma, 3
chr4	137810299;137814876	137814844;137824063	+	137810299;137823240	137823220;137824063	MXE	0.5	100	100	ENSMUST00000139759.8	ENSMUSG00000028760.17	Eif4g3	chr4	protein_coding	eukaryotic translation initiation factor 4 gamma, 3
chr4	137810299;137819084	137818676;137824063	+	137810299;137823240	137823220;137824063	MXE	0.5	100	100	ENSMUST00000139759.8	ENSMUSG00000028760.17	Eif4g3	chr4	protein_coding	eukaryotic translation initiation factor 4 gamma, 3
chr4	137720938	137721274	+	137720938	137721293	A3SS	0.5	50	50	ENSMUST00000139759.8	ENSMUSG00000028760.17	Eif4g3	chr4	protein_coding	eukaryotic translation initiation factor 4 gamma, 3
chr4	137732644	137772654	+	137721455	137772654	A5SS	0.5	50	50	ENSMUST00000139759.8	ENSMUSG00000028760.17	Eif4g3	chr4	protein_coding	eukaryotic translation initiation factor 4 gamma, 3
chr4	137810299	137824063	+	137810299;137811681	137811568;137824063	ES	0.2	50	50	ENSMUST00000058133.10	ENSMUSG00000028760.17	Eif4g3	chr4	protein_coding	eukaryotic translation initiation factor 4 gamma, 3
chr4	137832747	137847657	+	137832747	137842464	3pMXE	0.33	50	50	ENSMUST00000058133.10	ENSMUSG00000028760.17	Eif4g3	chr4	protein_coding	eukaryotic translation initiation factor 4 gamma, 3
chr4	137832747	137847660	+	137832747	137842464	3pMXE	0.33	50	50	ENSMUST00000058133.10	ENSMUSG00000028760.17	Eif4g3	chr4	protein_coding	eukaryotic translation initiation factor 4 gamma, 3
chr4	137810299;137814876	137814844;137824063	+	137810299;137811681	137811568;137824063	MXE	0.5	100	100	ENSMUST00000058133.10	ENSMUSG00000028760.17	Eif4g3	chr4	protein_coding	eukaryotic translation initiation factor 4 gamma, 3
chr4	137810299;137819084	137818676;137824063	+	137810299;137811681	137811568;137824063	MXE	0.5	100	100	ENSMUST00000058133.10	ENSMUSG00000028760.17	Eif4g3	chr4	protein_coding	eukaryotic translation initiation factor 4 gamma, 3
chr4	137810299	137824063	+	137810299;137814876	137814844;137824063	ES	0.2	50	50	ENSMUST00000105830.9	ENSMUSG00000028760.17	Eif4g3	chr4	protein_coding	eukaryotic translation initiation factor 4 gamma, 3
chr4	137853945	137873596	+	137853945	137854044	3pMXE	0.5	50	50	ENSMUST00000105830.9	ENSMUSG00000028760.17	Eif4g3	chr4	protein_coding	eukaryotic translation initiation factor 4 gamma, 3
chr4	137810299;137819084	137818676;137824063	+	137810299;137814876	137814844;137824063	MXE	0.5	100	100	ENSMUST00000105830.9	ENSMUSG00000028760.17	Eif4g3	chr4	protein_coding	eukaryotic translation initiation factor 4 gamma, 3
chr4	137814876;137823240	137823220;137824063	+	137814876	137824063	cassetteExon	0.5	100	100	ENSMUST00000105830.9	ENSMUSG00000028760.17	Eif4g3	chr4	protein_coding	eukaryotic translation initiation factor 4 gamma, 3
chr4	137832747	137847657	+	137832747	137847660	A3SS	0.33	50	50	ENSMUST00000105830.9	ENSMUSG00000028760.17	Eif4g3	chr4	protein_coding	eukaryotic translation initiation factor 4 gamma, 3
chr4	137910656	137915357	+	137910656;137912078	137911963;137915357	ES	0.5	50	50	ENSMUST00000084215.12	ENSMUSG00000028760.17	Eif4g3	chr4	protein_coding	eukaryotic translation initiation factor 4 gamma, 3
chr4	137810299;137819084	137818676;137824063	+	137810299	137824063	cassetteExon	0.5	100	100	ENSMUST00000084215.12	ENSMUSG00000028760.17	Eif4g3	chr4	protein_coding	eukaryotic translation initiation factor 4 gamma, 3
chr4	137905321	137907858	+	137905321	137907801	A3SS	0.5	50	50	ENSMUST00000084215.12	ENSMUSG00000028760.17	Eif4g3	chr4	protein_coding	eukaryotic translation initiation factor 4 gamma, 3
chr4	137810299;137811681	137811568;137824063	+	137810299;137823240	137814844;137824063	MXE	0.5	100	100	ENSMUST00000084214.12	ENSMUSG00000028760.17	Eif4g3	chr4	protein_coding	eukaryotic translation initiation factor 4 gamma, 3
chr4	137810299;137819084	137818676;137824063	+	137810299;137823240	137814844;137824063	MXE	0.5	100	100	ENSMUST00000084214.12	ENSMUSG00000028760.17	Eif4g3	chr4	protein_coding	eukaryotic translation initiation factor 4 gamma, 3
chr4	137772729	137810204	+	137772729	137785260	3pMXE	0.5	50	50	ENSMUST00000132194.8	ENSMUSG00000028760.17	Eif4g3	chr4	protein_coding	eukaryotic translation initiation factor 4 gamma, 3
chr4	137910656	137915357	+	137912078	137915357	5pMXE	0.5	50	50	ENSMUST00000140317.2	ENSMUSG00000028760.17	Eif4g3	chr4	protein_coding	eukaryotic translation initiation factor 4 gamma, 3
chr4	137944051	137949400	+	137944051;137949034	137948837;137949400	ES	0.25	50	50	ENSMUST00000105827.8	ENSMUSG00000028759.14	Hp1bp3	chr4	protein_coding	heterochromatin protein 1, binding protein 3
chr4	137944051;137946835	137946713;137948837	+	137944051	137948837	cassetteExon	0.5	100	100	ENSMUST00000105827.8	ENSMUSG00000028759.14	Hp1bp3	chr4	protein_coding	heterochromatin protein 1, binding protein 3
chr4	137949499	137950840	+	137949499	137950801	A3SS	0.5	50	50	ENSMUST00000105827.8	ENSMUSG00000028759.14	Hp1bp3	chr4	protein_coding	heterochromatin protein 1, binding protein 3
chr4	137944110	137948837	+	137944051	137948837	A5SS	0.2	50	50	ENSMUST00000105827.8	ENSMUSG00000028759.14	Hp1bp3	chr4	protein_coding	heterochromatin protein 1, binding protein 3
chr4	137944605	137948837	+	137944051	137948837	A5SS	0.2	50	50	ENSMUST00000105827.8	ENSMUSG00000028759.14	Hp1bp3	chr4	protein_coding	heterochromatin protein 1, binding protein 3
chr4	137944605	137949400	+	137949034	137949400	A5SS&ES	0.25	50	50	ENSMUST00000105827.8	ENSMUSG00000028759.14	Hp1bp3	chr4	protein_coding	heterochromatin protein 1, binding protein 3
chr4	137944691	137948837	+	137944051	137948837	A5SS	0.2	50	50	ENSMUST00000105827.8	ENSMUSG00000028759.14	Hp1bp3	chr4	protein_coding	heterochromatin protein 1, binding protein 3
chr4	137949029	137949400	+	137949034	137949400	A5SS	0.25	50	50	ENSMUST00000105827.8	ENSMUSG00000028759.14	Hp1bp3	chr4	protein_coding	heterochromatin protein 1, binding protein 3
chr4	137944110	137948837	+	137946835	137948837	A5SS&ES	0.2	50	50	ENSMUST00000142420.2	ENSMUSG00000028759.14	Hp1bp3	chr4	protein_coding	heterochromatin protein 1, binding protein 3
chr4	137944605	137948837	+	137946835	137948837	A5SS&ES	0.2	50	50	ENSMUST00000142420.2	ENSMUSG00000028759.14	Hp1bp3	chr4	protein_coding	heterochromatin protein 1, binding protein 3
chr4	137944691	137948837	+	137946835	137948837	A5SS&ES	0.2	50	50	ENSMUST00000142420.2	ENSMUSG00000028759.14	Hp1bp3	chr4	protein_coding	heterochromatin protein 1, binding protein 3
chr4	137944051	137949400	+	137949034	137949400	A5SS&ES	0.25	50	50	ENSMUST00000105826.8	ENSMUSG00000028759.14	Hp1bp3	chr4	protein_coding	heterochromatin protein 1, binding protein 3
chr4	137944605	137948837	+	137944110	137948837	A5SS	0.2	50	50	ENSMUST00000105826.8	ENSMUSG00000028759.14	Hp1bp3	chr4	protein_coding	heterochromatin protein 1, binding protein 3
chr4	137944691	137948837	+	137944110	137948837	A5SS	0.2	50	50	ENSMUST00000105826.8	ENSMUSG00000028759.14	Hp1bp3	chr4	protein_coding	heterochromatin protein 1, binding protein 3
chr4	137944051;137949029	137948837;137949400	+	137944051	137949400	cassetteExon	0.5	100	100	ENSMUST00000097836.10	ENSMUSG00000028759.14	Hp1bp3	chr4	protein_coding	heterochromatin protein 1, binding protein 3
chr4	137944051	137946713	+	137944051	137949400	A3SS	0.33	50	50	ENSMUST00000097836.10	ENSMUSG00000028759.14	Hp1bp3	chr4	protein_coding	heterochromatin protein 1, binding protein 3
chr4	137944605	137949400	+	137944051	137949400	A5SS	0.25	50	50	ENSMUST00000097836.10	ENSMUSG00000028759.14	Hp1bp3	chr4	protein_coding	heterochromatin protein 1, binding protein 3
chr4	137944605;137949029	137948837;137949400	+	137944605	137949400	cassetteExon	0.5	100	100	ENSMUST00000137851.8	ENSMUSG00000028759.14	Hp1bp3	chr4	protein_coding	heterochromatin protein 1, binding protein 3
chr4	137944605;137949034	137948837;137949400	+	137944605	137949400	cassetteExon	0.5	100	100	ENSMUST00000137851.8	ENSMUSG00000028759.14	Hp1bp3	chr4	protein_coding	heterochromatin protein 1, binding protein 3
chr4	137944691	137948837	+	137944605	137948837	A5SS	0.2	50	50	ENSMUST00000165861.8	ENSMUSG00000028759.14	Hp1bp3	chr4	protein_coding	heterochromatin protein 1, binding protein 3
chr4	137977819;137981000	137980923;137981142	+	137977819	137981142	cassetteExon	0.5	100	100	ENSMUST00000105824.8	ENSMUSG00000045349.16	Sh2d5	chr4	protein_coding	SH2 domain containing 5
chr4	137977819;137981000	137980923;137981584	+	137977819;137981269	137981142;137981584	MXE	0.5	100	100	ENSMUST00000105824.8	ENSMUSG00000045349.16	Sh2d5	chr4	protein_coding	SH2 domain containing 5
chr4	137981664	137982009	+	137981664	137984024	A3SS	0.5	50	50	ENSMUST00000124239.8	ENSMUSG00000045349.16	Sh2d5	chr4	protein_coding	SH2 domain containing 5
chr4	137983009	137984024	+	137981664	137984024	A5SS	0.5	50	50	ENSMUST00000124239.8	ENSMUSG00000045349.16	Sh2d5	chr4	protein_coding	SH2 domain containing 5
chr4	137981000;137981269	137981142;137981584	+	137981000	137981584	cassetteExon	0.5	100	100	ENSMUST00000139033.8	ENSMUSG00000045349.16	Sh2d5	chr4	protein_coding	SH2 domain containing 5
chr4	138023573;138025637	138025517;138028560	+	138023573	138028560	cassetteExon	0.5	100	100	ENSMUST00000105818.8	ENSMUSG00000028758.13	Kif17	chr4	protein_coding	kinesin family member 17
chr4	137977819	137980923	+	137977819	137996256	A3SS	0.33	50	50	ENSMUST00000105818.8	ENSMUSG00000028758.13	Kif17	chr4	protein_coding	kinesin family member 17
chr4	137977819	137981142	+	137977819	137996256	A3SS	0.33	50	50	ENSMUST00000105818.8	ENSMUSG00000028758.13	Kif17	chr4	protein_coding	kinesin family member 17
chr4	138002467	138005107	+	138002467	138005383	A3SS	0.5	50	50	ENSMUST00000105818.8	ENSMUSG00000028758.13	Kif17	chr4	protein_coding	kinesin family member 17
chr4	138008777	138016552	+	138008777	138013743	A3SS&ES	0.5	50	50	ENSMUST00000105818.8	ENSMUSG00000028758.13	Kif17	chr4	protein_coding	kinesin family member 17
chr4	138015796	138016552	+	138015796	138016549	A3SS	0.5	50	50	ENSMUST00000105818.8	ENSMUSG00000028758.13	Kif17	chr4	protein_coding	kinesin family member 17
chr4	137990044	137996256	+	137977819	137996256	A5SS	0.5	50	50	ENSMUST00000105818.8	ENSMUSG00000028758.13	Kif17	chr4	protein_coding	kinesin family member 17
chr4	138015796	138016552	+	138008777	138016552	A5SS	0.5	50	50	ENSMUST00000105821.3	ENSMUSG00000028758.13	Kif17	chr4	protein_coding	kinesin family member 17
chr4	138162190;138163710	138163491;138164939	+	138162190	138164939	cassetteExon	0.5	100	100	ENSMUST00000044058.11	ENSMUSG00000041241.13	Mul1	chr4	protein_coding	mitochondrial ubiquitin ligase activator of NFKB 1
chr4	138165719	138166262	+	138165673	138166262	A5SS	0.5	50	50	ENSMUST00000044058.11	ENSMUSG00000041241.13	Mul1	chr4	protein_coding	mitochondrial ubiquitin ligase activator of NFKB 1
chr4	138299954	138305939	-	138299954;138302735	138302610;138305939	ES	0.5	50	50	ENSMUST00000030533.12	ENSMUSG00000028753.13	Vwa5b1	chr4	protein_coding	von Willebrand factor A domain containing 5B1
chr4	138340278	138363026	-	138340278	138351216	5pMXE	0.5	50	50	ENSMUST00000030533.12	ENSMUSG00000028753.13	Vwa5b1	chr4	protein_coding	von Willebrand factor A domain containing 5B1
chr4	138327628	138332074	-	138327632	138332074	A3SS	0.5	50	50	ENSMUST00000030533.12	ENSMUSG00000028753.13	Vwa5b1	chr4	protein_coding	von Willebrand factor A domain containing 5B1
chr4	138332297	138332744	-	138332198	138332744	A3SS	0.5	50	50	ENSMUST00000030533.12	ENSMUSG00000028753.13	Vwa5b1	chr4	protein_coding	von Willebrand factor A domain containing 5B1
chr4	138336268	138338036	-	138336309	138338036	A3SS	0.5	50	50	ENSMUST00000030533.12	ENSMUSG00000028753.13	Vwa5b1	chr4	protein_coding	von Willebrand factor A domain containing 5B1
chr4	138333889	138334262	-	138333889	138336054	A5SS	0.5	50	50	ENSMUST00000030533.12	ENSMUSG00000028753.13	Vwa5b1	chr4	protein_coding	von Willebrand factor A domain containing 5B1
chr4	138448689	138459443	-	138448689	138452492	5pMXE	0.33	50	50	ENSMUST00000146415.2	ENSMUSG00000043621.14	Ubxn10	chr4	protein_coding	UBX domain protein 10
chr4	138448689	138448811	-	138448689	138452492	A5SS	0.33	50	50	ENSMUST00000146415.2	ENSMUSG00000043621.14	Ubxn10	chr4	protein_coding	UBX domain protein 10
chr4	138459396	138463180	-	138459517	138463180	A3SS&ES	0.5	50	50	ENSMUST00000105810.8	ENSMUSG00000043621.14	Ubxn10	chr4	protein_coding	UBX domain protein 10
chr4	138448689	138448811	-	138448689	138459443	A5SS	0.33	50	50	ENSMUST00000105810.8	ENSMUSG00000043621.14	Ubxn10	chr4	protein_coding	UBX domain protein 10
chr4	138452799	138453042	+	138452539	138453042	A5SS	0.5	50	50	ENSMUST00000105808.8	ENSMUSG00000028750.13	Pla2g2c	chr4	protein_coding	phospholipase A2, group IIC
chr4	138505280	138505952	+	138503161	138505952	A5SS	0.5	50	50	ENSMUST00000030528.9	ENSMUSG00000041202.13	Pla2g2d	chr4	protein_coding	phospholipase A2, group IID
chr4	138528769	138533496	-	138528769;138531962	138531818;138533496	ES	0.5	50	50	ENSMUST00000102512.11	ENSMUSG00000041193.16	Pla2g5	chr4	protein_coding	phospholipase A2, group V
chr4	138531962	138533393	-	138531962	138533496	A5SS	0.5	50	50	ENSMUST00000102512.11	ENSMUSG00000041193.16	Pla2g5	chr4	protein_coding	phospholipase A2, group V
chr4	138533545	138536899	-	138533545	138546311	A5SS	0.33	50	50	ENSMUST00000102512.11	ENSMUSG00000041193.16	Pla2g5	chr4	protein_coding	phospholipase A2, group V
chr4	138533545	138539398	-	138533545	138546311	A5SS	0.33	50	50	ENSMUST00000102512.11	ENSMUSG00000041193.16	Pla2g5	chr4	protein_coding	phospholipase A2, group V
chr4	138546426	138590481	-	138546566	138590481	A3SS	0.33	50	50	ENSMUST00000102513.8	ENSMUSG00000041193.16	Pla2g5	chr4	protein_coding	phospholipase A2, group V
chr4	138586458	138590481	-	138546566	138590481	A3SS	0.33	50	50	ENSMUST00000102513.8	ENSMUSG00000041193.16	Pla2g5	chr4	protein_coding	phospholipase A2, group V
chr4	138586458	138590481	-	138546426	138590481	A3SS	0.33	50	50	ENSMUST00000030524.14	ENSMUSG00000041193.16	Pla2g5	chr4	protein_coding	phospholipase A2, group V
chr4	138533545	138536899	-	138533545	138539398	A5SS	0.33	50	50	ENSMUST00000102511.2	ENSMUSG00000041193.16	Pla2g5	chr4	protein_coding	phospholipase A2, group V
chr4	138560689	138561054	+	138560689	138562061	A3SS	0.5	50	50	ENSMUST00000077582.14	ENSMUSG00000058908.15	Pla2g2a	chr4	polymorphic_pseudogene	phospholipase A2, group IIA (platelets, synovial fluid)
chr4	138605308	138607662	+	138606807	138607662	A5SS&ES	0.5	50	50	ENSMUST00000030531.14	ENSMUSG00000028751.14	Pla2g2e	chr4	protein_coding	phospholipase A2, group IIE
chr4	138700300	138710932	+	138700300;138704633	138704519;138710932	ES	0.33	50	50	ENSMUST00000123636.8	ENSMUSG00000041143.17	Tmco4	chr4	protein_coding	transmembrane and coiled-coil domains 4
chr4	138700598	138704519	+	138700300	138704519	A5SS	0.5	50	50	ENSMUST00000123636.8	ENSMUSG00000041143.17	Tmco4	chr4	protein_coding	transmembrane and coiled-coil domains 4
chr4	138700598	138710932	+	138704633	138710932	A5SS&ES	0.33	50	50	ENSMUST00000123636.8	ENSMUSG00000041143.17	Tmco4	chr4	protein_coding	transmembrane and coiled-coil domains 4
chr4	138757224	138763689	+	138757224	138779812	A3SS	0.5	50	50	ENSMUST00000043042.10	ENSMUSG00000041143.17	Tmco4	chr4	protein_coding	transmembrane and coiled-coil domains 4
chr4	138700598	138710932	+	138700300	138710932	A5SS	0.33	50	50	ENSMUST00000043042.10	ENSMUSG00000041143.17	Tmco4	chr4	protein_coding	transmembrane and coiled-coil domains 4
chr4	138746953	138748170	+	138747500	138748170	A5SS&ES	0.5	50	50	ENSMUST00000043042.10	ENSMUSG00000041143.17	Tmco4	chr4	protein_coding	transmembrane and coiled-coil domains 4
chr4	138700598	138710932	+	138700598;138704633	138704519;138710932	ES	0.33	50	50	ENSMUST00000050949.9	ENSMUSG00000041143.17	Tmco4	chr4	protein_coding	transmembrane and coiled-coil domains 4
chr4	138700300	138710932	+	138704633	138710932	A5SS&ES	0.33	50	50	ENSMUST00000050949.9	ENSMUSG00000041143.17	Tmco4	chr4	protein_coding	transmembrane and coiled-coil domains 4
chr4	138810913	138812765	-	138810913;138812663	138812552;138812765	ES	0.5	50	50	ENSMUST00000042844.7	ENSMUSG00000041120.7	Nbl1	chr4	protein_coding	NBL1, DAN family BMP antagonist
chr4	138812959;138819594	138819355;138820138	-	138812959	138820138	cassetteExon	0.5	100	100	ENSMUST00000042844.7	ENSMUSG00000041120.7	Nbl1	chr4	protein_coding	NBL1, DAN family BMP antagonist
chr4	138812959	138820138	-	138812959	138819355	5pMXE	0.5	50	50	ENSMUST00000132940.2	ENSMUSG00000041120.7	Nbl1	chr4	protein_coding	NBL1, DAN family BMP antagonist
chr4	138812959	138820138	-	138819594	138820138	3pMXE	0.5	50	50	ENSMUST00000132900.2	ENSMUSG00000041120.7	Nbl1	chr4	protein_coding	NBL1, DAN family BMP antagonist
chr4	138833214	138838528	-	138833214	138858233	A5SS	0.33	50	50	ENSMUST00000143971.2	ENSMUSG00000050608.12	Micos10	chr4	protein_coding	mitochondrial contact site and cristae organizing system subunit 10
chr4	138833214	138858099	-	138833214	138858233	A5SS	0.33	50	50	ENSMUST00000143971.2	ENSMUSG00000050608.12	Micos10	chr4	protein_coding	mitochondrial contact site and cristae organizing system subunit 10
chr4	138833214	138858099	-	138833214	138838528	5pMXE	0.33	50	50	ENSMUST00000123488.8	ENSMUSG00000050608.12	Micos10	chr4	protein_coding	mitochondrial contact site and cristae organizing system subunit 10
chr4	138989408;139006759	139006616;139007307	+	138989408	139007307	cassetteExon	0.5	100	100	ENSMUST00000102508.10	ENSMUSG00000028745.19	Capzb	chr4	protein_coding	capping protein (actin filament) muscle Z-line, beta
chr4	139015143;139016284	139016172;139018314	+	139015143	139018314	cassetteExon	0.5	100	100	ENSMUST00000102508.10	ENSMUSG00000028745.19	Capzb	chr4	protein_coding	capping protein (actin filament) muscle Z-line, beta
chr4	138921530	138966220	+	138920339	138966220	A5SS	0.2	50	50	ENSMUST00000102508.10	ENSMUSG00000028745.19	Capzb	chr4	protein_coding	capping protein (actin filament) muscle Z-line, beta
chr4	138926639	138966220	+	138920339	138966220	A5SS	0.2	50	50	ENSMUST00000102508.10	ENSMUSG00000028745.19	Capzb	chr4	protein_coding	capping protein (actin filament) muscle Z-line, beta
chr4	138954355	138966220	+	138920339	138966220	A5SS	0.2	50	50	ENSMUST00000102508.10	ENSMUSG00000028745.19	Capzb	chr4	protein_coding	capping protein (actin filament) muscle Z-line, beta
chr4	138960788	138966220	+	138920339	138966220	A5SS	0.2	50	50	ENSMUST00000102508.10	ENSMUSG00000028745.19	Capzb	chr4	protein_coding	capping protein (actin filament) muscle Z-line, beta
chr4	138926639	138966220	+	138921530	138966220	A5SS	0.2	50	50	ENSMUST00000030518.16	ENSMUSG00000028745.19	Capzb	chr4	protein_coding	capping protein (actin filament) muscle Z-line, beta
chr4	138954355	138966220	+	138921530	138966220	A5SS	0.2	50	50	ENSMUST00000030518.16	ENSMUSG00000028745.19	Capzb	chr4	protein_coding	capping protein (actin filament) muscle Z-line, beta
chr4	138960788	138966220	+	138921530	138966220	A5SS	0.2	50	50	ENSMUST00000030518.16	ENSMUSG00000028745.19	Capzb	chr4	protein_coding	capping protein (actin filament) muscle Z-line, beta
chr4	138954355	138966220	+	138926639	138966220	A5SS	0.2	50	50	ENSMUST00000145368.8	ENSMUSG00000028745.19	Capzb	chr4	protein_coding	capping protein (actin filament) muscle Z-line, beta
chr4	138960788	138966220	+	138926639	138966220	A5SS	0.2	50	50	ENSMUST00000145368.8	ENSMUSG00000028745.19	Capzb	chr4	protein_coding	capping protein (actin filament) muscle Z-line, beta
chr4	138960788	138966220	+	138954355	138966220	A5SS	0.2	50	50	ENSMUST00000138045.8	ENSMUSG00000028745.19	Capzb	chr4	protein_coding	capping protein (actin filament) muscle Z-line, beta
chr4	139033919	139035040	-	139034001	139035040	A3SS	0.5	50	50	ENSMUST00000139840.9	ENSMUSG00000028744.16	Slc66a1	chr4	protein_coding	solute carrier family 66 member 1
chr4	139029865	139033750	-	139029865	139033754	A5SS	0.5	50	50	ENSMUST00000139840.9	ENSMUSG00000028744.16	Slc66a1	chr4	protein_coding	solute carrier family 66 member 1
chr4	139076398	139076925	-	139076398	139076830	5pMXE	0.5	50	50	ENSMUST00000131052.8	ENSMUSG00000028741.14	Mrto4	chr4	protein_coding	mRNA turnover 4, ribosome maturation factor
chr4	139075113	139075232	-	139075116	139075232	A3SS	0.5	50	50	ENSMUST00000131052.8	ENSMUSG00000028741.14	Mrto4	chr4	protein_coding	mRNA turnover 4, ribosome maturation factor
chr4	139077158	139077747	-	139077028	139077747	A3SS	0.5	50	50	ENSMUST00000102503.10	ENSMUSG00000028741.14	Mrto4	chr4	protein_coding	mRNA turnover 4, ribosome maturation factor
chr4	139091090	139092506	+	139091090;139091650	139091642;139092506	ES	0.5	50	50	ENSMUST00000179784.9	ENSMUSG00000078517.13	Emc1	chr4	protein_coding	ER membrane protein complex subunit 1
chr4	139091090	139092497	+	139091090	139091642	A3SS&ES	0.33	50	50	ENSMUST00000179784.9	ENSMUSG00000078517.13	Emc1	chr4	protein_coding	ER membrane protein complex subunit 1
chr4	139091650	139092234	+	139091650	139092506	A3SS	0.5	50	50	ENSMUST00000179784.9	ENSMUSG00000078517.13	Emc1	chr4	protein_coding	ER membrane protein complex subunit 1
chr4	139091090	139092506	+	139091090	139092497	A3SS	0.33	50	50	ENSMUST00000082262.8	ENSMUSG00000078517.13	Emc1	chr4	protein_coding	ER membrane protein complex subunit 1
chr4	139080028	139176133	+	139080028	139081472	3pMXE	0.5	50	50	ENSMUST00000144335.2	ENSMUSG00000078517.13	Emc1	chr4	protein_coding	ER membrane protein complex subunit 1
chr4	139091090	139092506	+	139091090	139091642	A3SS&ES	0.33	50	50	ENSMUST00000155700.2	ENSMUSG00000078517.13	Emc1	chr4	protein_coding	ER membrane protein complex subunit 1
chr4	139174379	139176133	+	139080028	139176133	A5SS	0.5	50	50	ENSMUST00000147999.8	ENSMUSG00000066036.15	Ubr4	chr4	protein_coding	ubiquitin protein ligase E3 component n-recognin 4
chr4	139159072	139160931	+	139159072;139159825	139159793;139160931	ES	0.5	50	50	ENSMUST00000165860.8	ENSMUSG00000066036.15	Ubr4	chr4	protein_coding	ubiquitin protein ligase E3 component n-recognin 4
chr4	139162495;139163343	139163260;139163433	+	139162495	139163433	cassetteExon	0.5	100	100	ENSMUST00000165860.8	ENSMUSG00000066036.15	Ubr4	chr4	protein_coding	ubiquitin protein ligase E3 component n-recognin 4
chr4	139168133;139168607	139168503;139169997	+	139168133	139169997	cassetteExon	0.5	100	100	ENSMUST00000165860.8	ENSMUSG00000066036.15	Ubr4	chr4	protein_coding	ubiquitin protein ligase E3 component n-recognin 4
chr4	139206371	139206725	+	139206371	139206761	A3SS	0.5	50	50	ENSMUST00000165860.8	ENSMUSG00000066036.15	Ubr4	chr4	protein_coding	ubiquitin protein ligase E3 component n-recognin 4
chr4	139302908	139330524	+	139263943	139330524	A5SS	0.5	50	50	ENSMUST00000123827.9	ENSMUSG00000041025.16	Iffo2	chr4	protein_coding	intermediate filament family orphan 2
chr4	139362855	139364270	+	139362855;139363018	139362917;139364270	ES	0.5	50	50	ENSMUST00000178644.2	ENSMUSG00000094439.2	Gm21969	chr4	protein_coding	predicted gene 21969
chr4	139381070	139382555	+	139381070;139382374	139382217;139382555	ES	0.5	50	50	ENSMUST00000178644.2	ENSMUSG00000094439.2	Gm21969	chr4	protein_coding	predicted gene 21969
chr4	139389497	139394638	+	139389497	139389930	3pMXE	0.5	50	50	ENSMUST00000178644.2	ENSMUSG00000094439.2	Gm21969	chr4	protein_coding	predicted gene 21969
chr4	139556021	139556808	-	139556015	139556808	A3SS	0.5	50	50	ENSMUST00000030508.14	ENSMUSG00000028736.14	Pax7	chr4	protein_coding	paired box 7
chr4	139654531	139659561	-	139654531	139669582	A5SS	0.5	50	50	ENSMUST00000153921.2	ENSMUSG00000085928.2	4933427I22Rik	chr4	lncRNA	RIKEN cDNA 4933427I22 gene
chr4	140244179	140248476	-	140244179;140245071	140244999;140248476	ES	0.5	50	50	ENSMUST00000138493.8	ENSMUSG00000040964.17	Arhgef10l	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 10-like
chr4	140302768	140306579	-	140302768	140304365	5pMXE	0.5	50	50	ENSMUST00000138493.8	ENSMUSG00000040964.17	Arhgef10l	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 10-like
chr4	140274397;140279231	140279107;140279839	-	140274397	140279839	cassetteExon	0.5	100	100	ENSMUST00000138493.8	ENSMUSG00000040964.17	Arhgef10l	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 10-like
chr4	140295831;140296081	140296067;140297568	-	140295831	140297568	cassetteExon	0.5	100	100	ENSMUST00000138493.8	ENSMUSG00000040964.17	Arhgef10l	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 10-like
chr4	140308242	140311135	-	140308242	140308917	5pMXE	0.5	50	50	ENSMUST00000105797.9	ENSMUSG00000040964.17	Arhgef10l	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 10-like
chr4	140305668	140306579	-	140302768	140306579	A3SS	0.5	50	50	ENSMUST00000105797.9	ENSMUSG00000040964.17	Arhgef10l	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 10-like
chr4	140311243	140314095	-	140311243	140311444	5pMXE	0.33	50	50	ENSMUST00000105798.8	ENSMUSG00000040964.17	Arhgef10l	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 10-like
chr4	140311243	140319129	-	140311243	140311444	5pMXE	0.33	50	50	ENSMUST00000105798.8	ENSMUSG00000040964.17	Arhgef10l	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 10-like
chr4	140311243	140319129	-	140311243;140314211	140314095;140319129	ES	0.5	50	50	ENSMUST00000105799.8	ENSMUSG00000040964.17	Arhgef10l	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 10-like
chr4	140344303	140376283	-	140344303	140375945	5pMXE	0.33	50	50	ENSMUST00000105799.8	ENSMUSG00000040964.17	Arhgef10l	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 10-like
chr4	140344303	140393067	-	140344303	140375945	5pMXE	0.33	50	50	ENSMUST00000105799.8	ENSMUSG00000040964.17	Arhgef10l	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 10-like
chr4	140344303	140376283	-	140344303	140393067	A5SS	0.33	50	50	ENSMUST00000069623.12	ENSMUSG00000040964.17	Arhgef10l	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 10-like
chr4	140441743	140443177	+	140440824	140443177	A5SS	0.33	50	50	ENSMUST00000071169.9	ENSMUSG00000040945.14	Rcc2	chr4	protein_coding	regulator of chromosome condensation 2
chr4	140441779	140443177	+	140440824	140443177	A5SS	0.33	50	50	ENSMUST00000071169.9	ENSMUSG00000040945.14	Rcc2	chr4	protein_coding	regulator of chromosome condensation 2
chr4	140441779	140443177	+	140441743	140443177	A5SS	0.33	50	50	ENSMUST00000138682.8	ENSMUSG00000040945.14	Rcc2	chr4	protein_coding	regulator of chromosome condensation 2
chr4	140460051	140460278	-	140460051	140461575	A5SS	0.5	50	50	ENSMUST00000038749.11	ENSMUSG00000040935.13	Padi6	chr4	protein_coding	peptidyl arginine deiminase, type VI
chr4	140468385	140468837	-	140468385	140469069	A5SS	0.5	50	50	ENSMUST00000038749.11	ENSMUSG00000040935.13	Padi6	chr4	protein_coding	peptidyl arginine deiminase, type VI
chr4	140673806	140673989	+	140671846	140673989	A5SS	0.5	50	50	ENSMUST00000030765.7	ENSMUSG00000028927.7	Padi2	chr4	protein_coding	peptidyl arginine deiminase, type II
chr4	140724110	140726546	+	140724110	140726439	A3SS	0.5	50	50	ENSMUST00000168047.8	ENSMUSG00000036622.16	Atp13a2	chr4	protein_coding	ATPase type 13A2
chr4	140728184	140729199	+	140728184	140729195	A3SS	0.5	50	50	ENSMUST00000168047.8	ENSMUSG00000036622.16	Atp13a2	chr4	protein_coding	ATPase type 13A2
chr4	140733814	140734064	+	140733814	140733990	A3SS	0.5	50	50	ENSMUST00000037055.14	ENSMUSG00000036622.16	Atp13a2	chr4	protein_coding	ATPase type 13A2
chr4	140741759	140742228	+	140741759	140742294	A3SS	0.5	50	50	ENSMUST00000166376.9	ENSMUSG00000060572.18	Mfap2	chr4	protein_coding	microfibrillar-associated protein 2
chr4	140738032	140740137	+	140737793	140740137	A5SS	0.5	50	50	ENSMUST00000166376.9	ENSMUSG00000060572.18	Mfap2	chr4	protein_coding	microfibrillar-associated protein 2
chr4	140780402	140785373	-	140780402	140780831	5pMXE	0.5	50	50	ENSMUST00000102491.10	ENSMUSG00000040860.17	Crocc	chr4	protein_coding	ciliary rootlet coiled-coil, rootletin
chr4	140774440	140778353	-	140774440	140778352	A5SS	0.5	50	50	ENSMUST00000102491.10	ENSMUSG00000040860.17	Crocc	chr4	protein_coding	ciliary rootlet coiled-coil, rootletin
chr4	140774008;140774440	140774083;140778352	-	140774008	140778352	cassetteExon	0.5	100	100	ENSMUST00000097816.9	ENSMUSG00000040860.17	Crocc	chr4	protein_coding	ciliary rootlet coiled-coil, rootletin
chr4	140797544;140798251	140798166;140799840	-	140797544	140799840	cassetteExon	0.5	100	100	ENSMUST00000132906.8	ENSMUSG00000028923.15	Necap2	chr4	protein_coding	NECAP endocytosis associated 2
chr4	140797544;140799006	140798892;140799840	-	140797544	140799840	cassetteExon	0.5	100	100	ENSMUST00000132906.8	ENSMUSG00000028923.15	Necap2	chr4	protein_coding	NECAP endocytosis associated 2
chr4	140797544;140799028	140798892;140799840	-	140797544	140799840	cassetteExon	0.5	100	100	ENSMUST00000132906.8	ENSMUSG00000028923.15	Necap2	chr4	protein_coding	NECAP endocytosis associated 2
chr4	140801090	140802271	-	140801073	140802271	A3SS	0.5	50	50	ENSMUST00000132906.8	ENSMUSG00000028923.15	Necap2	chr4	protein_coding	NECAP endocytosis associated 2
chr4	140797544	140798892	-	140797544;140798251	140798166;140798892	ES	0.5	50	50	ENSMUST00000145621.8	ENSMUSG00000028923.15	Necap2	chr4	protein_coding	NECAP endocytosis associated 2
chr4	140798251	140799840	-	140798251	140798892	5pMXE	0.5	50	50	ENSMUST00000145621.8	ENSMUSG00000028923.15	Necap2	chr4	protein_coding	NECAP endocytosis associated 2
chr4	140797544;140799006	140798892;140799840	-	140797544;140798251	140798166;140799840	MXE	0.5	100	100	ENSMUST00000153721.8	ENSMUSG00000028923.15	Necap2	chr4	protein_coding	NECAP endocytosis associated 2
chr4	140798251;140799006	140798892;140799840	-	140798251	140799840	cassetteExon	0.5	100	100	ENSMUST00000153721.8	ENSMUSG00000028923.15	Necap2	chr4	protein_coding	NECAP endocytosis associated 2
chr4	140797544;140799028	140798892;140799840	-	140797544;140798251	140798166;140799840	MXE	0.5	100	100	ENSMUST00000153721.8	ENSMUSG00000028923.15	Necap2	chr4	protein_coding	NECAP endocytosis associated 2
chr4	140798251;140799028	140798892;140799840	-	140798251	140799840	cassetteExon	0.5	100	100	ENSMUST00000153721.8	ENSMUSG00000028923.15	Necap2	chr4	protein_coding	NECAP endocytosis associated 2
chr4	140799006	140799840	-	140799028	140799840	A3SS	0.25	50	50	ENSMUST00000152915.8	ENSMUSG00000028923.15	Necap2	chr4	protein_coding	NECAP endocytosis associated 2
chr4	140797544	140799840	-	140797544	140798892	5pMXE	0.33	50	50	ENSMUST00000122933.2	ENSMUSG00000028923.15	Necap2	chr4	protein_coding	NECAP endocytosis associated 2
chr4	140846089	140867003	-	140846089;140847684	140847635;140867003	ES	0.33	50	50	ENSMUST00000148204.8	ENSMUSG00000040842.18	Szrd1	chr4	protein_coding	SUZ RNA binding domain containing 1
chr4	140843951	140845838	-	140843175	140845838	A3SS	0.5	50	50	ENSMUST00000148204.8	ENSMUSG00000040842.18	Szrd1	chr4	protein_coding	SUZ RNA binding domain containing 1
chr4	140846092	140847635	-	140846089	140847635	A3SS	0.5	50	50	ENSMUST00000148204.8	ENSMUSG00000040842.18	Szrd1	chr4	protein_coding	SUZ RNA binding domain containing 1
chr4	140846092	140867003	-	140847684	140867003	A3SS&ES	0.33	50	50	ENSMUST00000148204.8	ENSMUSG00000040842.18	Szrd1	chr4	protein_coding	SUZ RNA binding domain containing 1
chr4	140846092	140867003	-	140846092;140847684	140847635;140867003	ES	0.33	50	50	ENSMUST00000102487.4	ENSMUSG00000040842.18	Szrd1	chr4	protein_coding	SUZ RNA binding domain containing 1
chr4	140846089	140867003	-	140847684	140867003	A3SS&ES	0.33	50	50	ENSMUST00000102487.4	ENSMUSG00000040842.18	Szrd1	chr4	protein_coding	SUZ RNA binding domain containing 1
chr4	140846089	140867003	-	140846092	140867003	A3SS	0.33	50	50	ENSMUST00000094549.11	ENSMUSG00000040842.18	Szrd1	chr4	protein_coding	SUZ RNA binding domain containing 1
chr4	140875490	140895024	+	140875490	140907709	A3SS	0.5	50	50	ENSMUST00000146768.2	ENSMUSG00000028920.10	Fbxo42	chr4	protein_coding	F-box protein 42
chr4	140898251	140907709	+	140875490	140907709	A5SS	0.5	50	50	ENSMUST00000146768.2	ENSMUSG00000028920.10	Fbxo42	chr4	protein_coding	F-box protein 42
chr4	140944715	140945849	+	140944715;140945540	140945416;140945849	ES	0.5	50	50	ENSMUST00000097813.3	ENSMUSG00000073733.5	Cplane2	chr4	protein_coding	ciliogenesis and planar polarity effector 2
chr4	140968055	140973486	+	140968055;140972277	140972129;140973486	ES	0.2	50	50	ENSMUST00000141834.9	ENSMUSG00000028919.12	Arhgef19	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 19
chr4	140972277;140973363	140973257;140973486	+	140972277	140973486	cassetteExon	0.5	100	100	ENSMUST00000141834.9	ENSMUSG00000028919.12	Arhgef19	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 19
chr4	140970321	140972129	+	140968055	140972129	A5SS	0.5	50	50	ENSMUST00000141834.9	ENSMUSG00000028919.12	Arhgef19	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 19
chr4	140970321	140973486	+	140972277	140973486	A5SS&ES	0.2	50	50	ENSMUST00000141834.9	ENSMUSG00000028919.12	Arhgef19	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 19
chr4	140972783	140973486	+	140972277	140973486	A5SS	0.2	50	50	ENSMUST00000141834.9	ENSMUSG00000028919.12	Arhgef19	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 19
chr4	140973920	140974689	+	140973920	140974260	A3SS	0.5	50	50	ENSMUST00000140536.3	ENSMUSG00000028919.12	Arhgef19	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 19
chr4	140970321	140973486	+	140968055	140973486	A5SS	0.2	50	50	ENSMUST00000140536.3	ENSMUSG00000028919.12	Arhgef19	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 19
chr4	140972783	140973486	+	140968055	140973486	A5SS	0.2	50	50	ENSMUST00000140536.3	ENSMUSG00000028919.12	Arhgef19	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 19
chr4	140973363	140973486	+	140968055	140973486	A5SS	0.2	50	50	ENSMUST00000140536.3	ENSMUSG00000028919.12	Arhgef19	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 19
chr4	140972783	140973486	+	140973363	140973486	A5SS&ES	0.25	50	50	ENSMUST00000138096.8	ENSMUSG00000028919.12	Arhgef19	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 19
chr4	140970321	140973486	+	140970321;140972277	140972129;140973486	ES	0.25	50	50	ENSMUST00000006618.9	ENSMUSG00000028919.12	Arhgef19	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 19
chr4	140973920	140974689	+	140973920;140974541	140974260;140974689	ES	0.5	50	50	ENSMUST00000006618.9	ENSMUSG00000028919.12	Arhgef19	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 19
chr4	140972783	140973486	+	140970321	140973486	A5SS	0.2	50	50	ENSMUST00000125392.8	ENSMUSG00000028919.12	Arhgef19	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 19
chr4	140973363	140973486	+	140970321	140973486	A5SS	0.2	50	50	ENSMUST00000125392.8	ENSMUSG00000028919.12	Arhgef19	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 19
chr4	140973920	140974689	+	140974541	140974689	5pMXE	0.5	50	50	ENSMUST00000184162.2	ENSMUSG00000028919.12	Arhgef19	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 19
chr4	141036391	141037461	+	141036391	141043898	A3SS	0.5	50	50	ENSMUST00000006614.3	ENSMUSG00000006445.4	Epha2	chr4	protein_coding	Eph receptor A2
chr4	141029826	141033825	+	141028745	141033825	A5SS	0.5	50	50	ENSMUST00000006614.3	ENSMUSG00000006445.4	Epha2	chr4	protein_coding	Eph receptor A2
chr4	141119151	141119836	-	141119168	141119836	A3SS	0.5	50	50	ENSMUST00000105790.8	ENSMUSG00000033770.14	Clcnka	chr4	protein_coding	chloride channel, voltage-sensitive Ka
chr4	141125364	141125812	-	141125364	141125968	A5SS	0.5	50	50	ENSMUST00000042617.14	ENSMUSG00000033770.14	Clcnka	chr4	protein_coding	chloride channel, voltage-sensitive Ka
chr4	141126196	141135054	+	141126196	141135024	A3SS	0.5	50	50	ENSMUST00000148320.8	ENSMUSG00000086061.8	Gm13075	chr4	lncRNA	predicted gene 13075
chr4	141132150;141132446	141132363;141132583	-	141132150	141132583	cassetteExon	0.5	100	100	ENSMUST00000135486.8	ENSMUSG00000006216.11	Clcnkb	chr4	protein_coding	chloride channel, voltage-sensitive Kb
chr4	141174648	141186487	+	141174648	141189080	A3SS	0.5	50	50	ENSMUST00000006377.13	ENSMUSG00000006215.13	Zbtb17	chr4	protein_coding	zinc finger and BTB domain containing 17
chr4	141193418	141193710	+	141193418	141193659	A3SS	0.5	50	50	ENSMUST00000006377.13	ENSMUSG00000006215.13	Zbtb17	chr4	protein_coding	zinc finger and BTB domain containing 17
chr4	141191782	141191871	+	141191789	141191871	A5SS	0.5	50	50	ENSMUST00000006377.13	ENSMUSG00000006215.13	Zbtb17	chr4	protein_coding	zinc finger and BTB domain containing 17
chr4	141206700;141208125	141208057;141211036	-	141206700	141211036	cassetteExon	0.5	100	100	ENSMUST00000078886.10	ENSMUSG00000040761.17	Spen	chr4	protein_coding	spen family transcription repressor
chr4	141223200	141244147	-	141221709	141244147	A3SS	0.5	50	50	ENSMUST00000078886.10	ENSMUSG00000040761.17	Spen	chr4	protein_coding	spen family transcription repressor
chr4	141323259	141325801	-	141323259	141325394	5pMXE	0.14	50	50	ENSMUST00000006381.11	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141323259	141327159	-	141323259	141325394	5pMXE	0.14	50	50	ENSMUST00000006381.11	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141323259	141327257	-	141323259	141325394	5pMXE	0.14	50	50	ENSMUST00000006381.11	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141323259	141328878	-	141323259	141325394	5pMXE	0.14	50	50	ENSMUST00000006381.11	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141323259	141333232	-	141323259	141325394	5pMXE	0.14	50	50	ENSMUST00000006381.11	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141323259	141325425	-	141323259	141325394	A5SS	0.14	50	50	ENSMUST00000006381.11	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141323259	141327257	-	141323259	141327159	5pMXE	0.14	50	50	ENSMUST00000105784.8	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141323259	141328878	-	141323259	141327159	5pMXE	0.14	50	50	ENSMUST00000105784.8	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141323259	141333232	-	141323259	141327159	5pMXE	0.14	50	50	ENSMUST00000105784.8	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141323221	141327159	-	141323259	141327159	A3SS	0.5	50	50	ENSMUST00000105784.8	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141323259	141325425	-	141323259	141327159	A5SS	0.14	50	50	ENSMUST00000105784.8	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141323259	141325801	-	141323259	141327159	A5SS	0.14	50	50	ENSMUST00000105784.8	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141323259;141329020	141328878;141333232	-	141323259	141333232	cassetteExon	0.5	100	100	ENSMUST00000105785.9	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141323224	141333232	-	141323259	141333232	A3SS	0.2	50	50	ENSMUST00000105785.9	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141323287	141333232	-	141323259	141333232	A3SS	0.2	50	50	ENSMUST00000105785.9	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141329401	141333232	-	141323259	141333232	A3SS	0.2	50	50	ENSMUST00000105785.9	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141323259	141325425	-	141323259	141333232	A5SS	0.14	50	50	ENSMUST00000105785.9	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141323259	141325801	-	141323259	141333232	A5SS	0.14	50	50	ENSMUST00000105785.9	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141323259	141327257	-	141323259	141333232	A5SS	0.14	50	50	ENSMUST00000105785.9	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141323224	141333232	-	141323224	141327033	5pMXE	0.33	50	50	ENSMUST00000141518.8	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141323224	141325292	-	141323224	141327033	A5SS	0.33	50	50	ENSMUST00000141518.8	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141329020	141333232	-	141329020;141329401	141329294;141333232	ES	0.2	50	50	ENSMUST00000130181.8	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141323224	141333232	-	141329401	141333232	A3SS&ES	0.2	50	50	ENSMUST00000130181.8	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141323287	141333232	-	141329401	141333232	A3SS&ES	0.2	50	50	ENSMUST00000130181.8	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141323259	141325425	-	141323259	141328878	A5SS	0.14	50	50	ENSMUST00000130181.8	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141323259	141325801	-	141323259	141328878	A5SS	0.14	50	50	ENSMUST00000130181.8	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141323259	141327257	-	141323259	141328878	A5SS	0.14	50	50	ENSMUST00000130181.8	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141323259	141327257	-	141323259	141325801	5pMXE	0.14	50	50	ENSMUST00000147764.8	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141323259	141325425	-	141323259	141325801	A5SS	0.14	50	50	ENSMUST00000147764.8	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141323259	141325425	-	141323259	141327257	A5SS	0.14	50	50	ENSMUST00000147785.8	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141323224	141333232	-	141323224	141325292	5pMXE	0.33	50	50	ENSMUST00000131317.8	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141323287	141333232	-	141323224	141333232	A3SS	0.2	50	50	ENSMUST00000123150.2	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141329020	141333232	-	141323224	141333232	A3SS	0.2	50	50	ENSMUST00000123150.2	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141329020	141333232	-	141323287	141333232	A3SS	0.2	50	50	ENSMUST00000136831.2	ENSMUSG00000006219.13	Fblim1	chr4	protein_coding	filamin binding LIM protein 1
chr4	141342446	141343515	-	141342421	141343515	A3SS	0.5	50	50	ENSMUST00000143154.8	ENSMUSG00000043085.15	Tmem82	chr4	protein_coding	transmembrane protein 82
chr4	141341788	141341886	+	141341400	141341886	A5SS	0.5	50	50	ENSMUST00000144017.8	ENSMUSG00000073731.13	AI507597	chr4	lncRNA	expressed sequence AI507597
chr4	141361789	141366987	-	141361789;141364795	141364736;141366987	ES	0.5	50	50	ENSMUST00000084203.11	ENSMUSG00000028917.15	Plekhm2	chr4	protein_coding	pleckstrin homology domain containing, family M (with RUN domain) member 2
chr4	141497887	141498218	-	141497347	141498218	A3SS	0.5	50	50	ENSMUST00000038014.11	ENSMUSG00000040697.11	Dnajc16	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C16
chr4	141516384	141518072	-	141516384	141517901	A5SS	0.5	50	50	ENSMUST00000038014.11	ENSMUSG00000040697.11	Dnajc16	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C16
chr4	141521297;141523670	141523623;141523746	+	141521297	141523746	cassetteExon	0.5	100	100	ENSMUST00000128660.2	ENSMUSG00000028914.14	Casp9	chr4	protein_coding	caspase 9
chr4	141521297	141523749	+	141521297	141523746	A3SS	0.33	50	50	ENSMUST00000128660.2	ENSMUSG00000028914.14	Casp9	chr4	protein_coding	caspase 9
chr4	141539029;141539627	141539518;141540906	+	141539029	141540906	cassetteExon	0.5	100	100	ENSMUST00000097805.11	ENSMUSG00000028914.14	Casp9	chr4	protein_coding	caspase 9
chr4	141521297	141523623	+	141521297	141523749	A3SS	0.33	50	50	ENSMUST00000153094.2	ENSMUSG00000028914.14	Casp9	chr4	protein_coding	caspase 9
chr4	141571107	141572493	-	141571107;141572409	141572312;141572493	ES	0.5	50	50	ENSMUST00000176781.8	ENSMUSG00002075770.1	RP23-395H4.5	chr4	lncRNA	--
chr4	141571107	141572493	-	141572409	141572493	3pMXE	0.5	50	50	ENSMUST00000136064.2	ENSMUSG00000062478.18	Ctrc	chr4	polymorphic_pseudogene	chymotrypsin C (caldecrin)
chr4	141738962;141740488	141740295;141742260	-	141738962	141742260	cassetteExon	0.5	100	100	ENSMUST00000105780.8	ENSMUSG00000051435.12	Fhad1	chr4	protein_coding	forkhead-associated (FHA) phosphopeptide binding domain 1
chr4	141741238	141742260	-	141738962	141742260	A3SS	0.33	50	50	ENSMUST00000105780.8	ENSMUSG00000051435.12	Fhad1	chr4	protein_coding	forkhead-associated (FHA) phosphopeptide binding domain 1
chr4	141678988	141679268	-	141678988	141681353	A5SS	0.5	50	50	ENSMUST00000105780.8	ENSMUSG00000051435.12	Fhad1	chr4	protein_coding	forkhead-associated (FHA) phosphopeptide binding domain 1
chr4	141741238	141742260	-	141740488	141742260	A3SS	0.33	50	50	ENSMUST00000123068.2	ENSMUSG00000051435.12	Fhad1	chr4	protein_coding	forkhead-associated (FHA) phosphopeptide binding domain 1
chr4	141813124	141813691	+	141813042	141813691	A5SS	0.5	50	50	ENSMUST00000153023.2	ENSMUSG00000073728.11	Tmem51os1	chr4	lncRNA	Tmem51 opposite strand 1
chr4	141813869	141815063	+	141813869	141814187	A3SS	0.5	50	50	ENSMUST00000141769.8	ENSMUSG00000073728.11	Tmem51os1	chr4	lncRNA	Tmem51 opposite strand 1
chr4	141813869	141815063	+	141813869;141814605	141814187;141815063	ES	0.5	50	50	ENSMUST00000150202.8	ENSMUSG00000073728.11	Tmem51os1	chr4	lncRNA	Tmem51 opposite strand 1
chr4	141839577	141844396	-	141839650	141844396	A3SS	0.5	50	50	ENSMUST00000155023.9	ENSMUSG00000040606.15	Kazn	chr4	protein_coding	kazrin, periplakin interacting protein
chr4	141874459	141878157	-	141874456	141878157	A3SS	0.5	50	50	ENSMUST00000155023.9	ENSMUSG00000040606.15	Kazn	chr4	protein_coding	kazrin, periplakin interacting protein
chr4	141870655	141874334	-	141870655	141874329	A5SS	0.5	50	50	ENSMUST00000155023.9	ENSMUSG00000040606.15	Kazn	chr4	protein_coding	kazrin, periplakin interacting protein
chr4	141937517	141966296	-	141937517	142204645	A5SS	0.5	50	50	ENSMUST00000155023.9	ENSMUSG00000040606.15	Kazn	chr4	protein_coding	kazrin, periplakin interacting protein
chr4	142921304	142939455	-	142921304	142939185	5pMXE	0.5	50	50	ENSMUST00000105778.8	ENSMUSG00000057637.14	Prdm2	chr4	protein_coding	PR domain containing 2, with ZNF domain
chr4	142896758	142905885	-	142896758	142905858	A5SS	0.5	50	50	ENSMUST00000105778.8	ENSMUSG00000057637.14	Prdm2	chr4	protein_coding	PR domain containing 2, with ZNF domain
chr4	142995869	143000470	-	142995869;142997131	142997093;143000470	ES	0.5	50	50	ENSMUST00000030317.14	ENSMUSG00000028583.15	Pdpn	chr4	protein_coding	podoplanin
chr4	143139661	143143210	+	143139661;143141983	143141919;143143210	ES	0.5	50	50	ENSMUST00000059790.11	ENSMUSG00000046862.15	Pramel12	chr4	protein_coding	PRAME like 12
chr4	143139661	143140675	+	143139661	143141919	A3SS	0.25	50	50	ENSMUST00000059790.11	ENSMUSG00000046862.15	Pramel12	chr4	protein_coding	PRAME like 12
chr4	143139661	143143190	+	143139661	143141919	A3SS&ES	0.25	50	50	ENSMUST00000059790.11	ENSMUSG00000046862.15	Pramel12	chr4	protein_coding	PRAME like 12
chr4	143141983	143143190	+	143141983	143143210	A3SS	0.5	50	50	ENSMUST00000059790.11	ENSMUSG00000046862.15	Pramel12	chr4	protein_coding	PRAME like 12
chr4	143139661;143141983	143141919;143143190	+	143139661	143143190	cassetteExon	0.5	100	100	ENSMUST00000132915.2	ENSMUSG00000046862.15	Pramel12	chr4	protein_coding	PRAME like 12
chr4	143139661	143140675	+	143139661	143143190	A3SS	0.25	50	50	ENSMUST00000132915.2	ENSMUSG00000046862.15	Pramel12	chr4	protein_coding	PRAME like 12
chr4	143139661	143143210	+	143139661	143143190	A3SS	0.25	50	50	ENSMUST00000132915.2	ENSMUSG00000046862.15	Pramel12	chr4	protein_coding	PRAME like 12
chr4	143139661	143140675	+	143139661	143143210	A3SS	0.25	50	50	ENSMUST00000037356.8	ENSMUSG00000046862.15	Pramel12	chr4	protein_coding	PRAME like 12
chr4	143139661	143143210	+	143139661	143141919	A3SS&ES	0.25	50	50	ENSMUST00000155157.2	ENSMUSG00000046862.15	Pramel12	chr4	protein_coding	PRAME like 12
chr4	143166772	143176823	-	143166772;143167369	143167227;143176823	ES	0.5	50	50	ENSMUST00000061277.11	ENSMUSG00000047799.16	Oog4	chr4	protein_coding	oogenesin 4
chr4	143516001	143520099	+	143516001;143519581	143519271;143520099	ES	0.5	50	50	ENSMUST00000085144.11	ENSMUSG00000066031.14	Pramel25	chr4	protein_coding	PRAME like 25
chr4	143520246	143521303	+	143520674	143521303	A5SS	0.5	50	50	ENSMUST00000085144.11	ENSMUSG00000066031.14	Pramel25	chr4	protein_coding	PRAME like 25
chr4	143573138	143574206	+	143573138	143577250	A3SS	0.5	50	50	ENSMUST00000094522.8	ENSMUSG00000029451.15	Pramel27	chr4	protein_coding	PRAME like 27
chr4	143576248	143577250	+	143573138	143577250	A5SS	0.5	50	50	ENSMUST00000094522.8	ENSMUSG00000029451.15	Pramel27	chr4	protein_coding	PRAME like 27
chr4	143578224	143579325	+	143578649	143579325	A5SS	0.5	50	50	ENSMUST00000094522.8	ENSMUSG00000029451.15	Pramel27	chr4	protein_coding	PRAME like 27
chr4	143785797;143791511	143791464;143792302	+	143785797	143792302	cassetteExon	0.5	100	100	ENSMUST00000091676.12	ENSMUSG00000073724.13	Pramel4	chr4	protein_coding	PRAME like 4
chr4	143792611	143793116	+	143792611	143793113	A3SS	0.5	50	50	ENSMUST00000091676.12	ENSMUSG00000073724.13	Pramel4	chr4	protein_coding	PRAME like 4
chr4	143792469	143793113	+	143792611	143793113	A5SS	0.5	50	50	ENSMUST00000091676.12	ENSMUSG00000073724.13	Pramel4	chr4	protein_coding	PRAME like 4
chr4	143917359	143920545	+	143917359	143920012	A3SS	0.5	50	50	ENSMUST00000141847.2	ENSMUSG00000066030.7	Oog2	chr4	protein_coding	oogenesin 2
chr4	143917359	143920545	+	143917359;143920075	143920012;143920545	ES	0.5	50	50	ENSMUST00000080405.2	ENSMUSG00000066030.7	Oog2	chr4	protein_coding	oogenesin 2
chr4	143920855	143922379	+	143920855	143921379	A3SS&ES	0.5	50	50	ENSMUST00000080405.2	ENSMUSG00000066030.7	Oog2	chr4	protein_coding	oogenesin 2
chr4	143935398	143939506	-	143935398;143936222	143935912;143939506	ES	0.25	50	50	ENSMUST00000105754.8	ENSMUSG00000046262.15	Pramel29	chr4	protein_coding	PRAME like 29
chr4	143936222;143937470	143937420;143939506	-	143936222	143939506	cassetteExon	0.5	100	100	ENSMUST00000105754.8	ENSMUSG00000046262.15	Pramel29	chr4	protein_coding	PRAME like 29
chr4	143936222;143938673	143938492;143939506	-	143936222	143939506	cassetteExon	0.5	100	100	ENSMUST00000105754.8	ENSMUSG00000046262.15	Pramel29	chr4	protein_coding	PRAME like 29
chr4	143934188	143934823	-	143934188	143935251	A5SS	0.5	50	50	ENSMUST00000105754.8	ENSMUSG00000046262.15	Pramel29	chr4	protein_coding	PRAME like 29
chr4	143937470	143939506	-	143935398	143939506	A3SS	0.25	50	50	ENSMUST00000105755.2	ENSMUSG00000046262.15	Pramel29	chr4	protein_coding	PRAME like 29
chr4	143938673	143939506	-	143935398	143939506	A3SS	0.25	50	50	ENSMUST00000105755.2	ENSMUSG00000046262.15	Pramel29	chr4	protein_coding	PRAME like 29
chr4	143936222;143938673	143938492;143939506	-	143936222;143937470	143937420;143939506	MXE	0.5	100	100	ENSMUST00000147855.2	ENSMUSG00000046262.15	Pramel29	chr4	protein_coding	PRAME like 29
chr4	143999798	144000430	-	143999798	144000288	A5SS	0.5	50	50	ENSMUST00000035757.13	ENSMUSG00000036749.16	Pramel5	chr4	protein_coding	PRAME like 5
chr4	144000161	144000430	-	143999798	144000430	A3SS	0.5	50	50	ENSMUST00000144127.8	ENSMUSG00000036749.16	Pramel5	chr4	protein_coding	PRAME like 5
chr4	144122572;144130020	144129908;144134927	-	144122572	144134927	cassetteExon	0.5	100	100	ENSMUST00000030326.10	ENSMUSG00000028591.12	Pramel13	chr4	protein_coding	PRAME like 13
chr4	144430535;144431815	144431752;144441862	-	144430535	144441862	cassetteExon	0.5	100	100	ENSMUST00000209924.2	ENSMUSG00000041735.9	AAdacl4fm3	chr4	protein_coding	AADACL4 family member 3
chr4	144645364;144646074	144645800;144646411	+	144645364	144646411	cassetteExon	0.5	100	100	ENSMUST00000105744.8	ENSMUSG00000066026.15	Dhrs3	chr4	protein_coding	dehydrogenase/reductase (SDR family) member 3
chr4	144645364;144646074	144645955;144646411	+	144645364	144646411	cassetteExon	0.5	100	100	ENSMUST00000105744.8	ENSMUSG00000066026.15	Dhrs3	chr4	protein_coding	dehydrogenase/reductase (SDR family) member 3
chr4	144619945	144620155	+	144619480	144620155	A5SS	0.5	50	50	ENSMUST00000105744.8	ENSMUSG00000066026.15	Dhrs3	chr4	protein_coding	dehydrogenase/reductase (SDR family) member 3
chr4	144619945	144645221	+	144620279	144645221	A5SS&ES	0.5	50	50	ENSMUST00000105744.8	ENSMUSG00000066026.15	Dhrs3	chr4	protein_coding	dehydrogenase/reductase (SDR family) member 3
chr4	144645364	144645800	+	144645364	144645955	A3SS	0.33	50	50	ENSMUST00000171001.8	ENSMUSG00000066026.15	Dhrs3	chr4	protein_coding	dehydrogenase/reductase (SDR family) member 3
chr4	144619945;144620279	144620155;144645221	+	144619945	144645221	cassetteExon	0.5	100	100	ENSMUST00000128926.8	ENSMUSG00000066026.15	Dhrs3	chr4	protein_coding	dehydrogenase/reductase (SDR family) member 3
chr4	144645364	144646411	+	144646074	144646411	5pMXE	0.5	50	50	ENSMUST00000133265.2	ENSMUSG00000066026.15	Dhrs3	chr4	protein_coding	dehydrogenase/reductase (SDR family) member 3
chr4	144710019	144746707	-	144710019;144743500	144743305;144746707	ES	0.5	50	50	ENSMUST00000036579.14	ENSMUSG00000020220.17	Vps13d	chr4	protein_coding	vacuolar protein sorting 13D
chr4	144826640	144832369	-	144826640;144830258	144830184;144832369	ES	0.5	50	50	ENSMUST00000036579.14	ENSMUSG00000020220.17	Vps13d	chr4	protein_coding	vacuolar protein sorting 13D
chr4	144826637	144830184	-	144826640	144830184	A3SS	0.5	50	50	ENSMUST00000036579.14	ENSMUSG00000020220.17	Vps13d	chr4	protein_coding	vacuolar protein sorting 13D
chr4	144904647	144904759	-	144904665	144904759	A3SS	0.5	50	50	ENSMUST00000036579.14	ENSMUSG00000020220.17	Vps13d	chr4	protein_coding	vacuolar protein sorting 13D
chr4	144710019	144710446	-	144710019	144743305	A5SS	0.33	50	50	ENSMUST00000036579.14	ENSMUSG00000020220.17	Vps13d	chr4	protein_coding	vacuolar protein sorting 13D
chr4	144772975	144777524	-	144772975	144780687	A5SS	0.5	50	50	ENSMUST00000036579.14	ENSMUSG00000020220.17	Vps13d	chr4	protein_coding	vacuolar protein sorting 13D
chr4	144710019	144710446	-	144710019	144746707	A5SS	0.33	50	50	ENSMUST00000130704.8	ENSMUSG00000020220.17	Vps13d	chr4	protein_coding	vacuolar protein sorting 13D
chr4	144826640	144832369	-	144830258	144832369	A3SS&ES	0.5	50	50	ENSMUST00000185113.2	ENSMUSG00000020220.17	Vps13d	chr4	protein_coding	vacuolar protein sorting 13D
chr4	144710019	144746707	-	144743500	144746707	3pMXE	0.5	50	50	ENSMUST00000144835.2	ENSMUSG00000020220.17	Vps13d	chr4	protein_coding	vacuolar protein sorting 13D
chr4	144954166	144955645	-	144954166	144955574	A5SS	0.5	50	50	ENSMUST00000030336.11	ENSMUSG00000028599.11	Tnfrsf1b	chr4	protein_coding	tumor necrosis factor receptor superfamily, member 1b
chr4	144995805	145004096	-	144995805;145001066	145000853;145004096	ES	0.5	50	50	ENSMUST00000030339.13	ENSMUSG00000028602.13	Tnfrsf8	chr4	protein_coding	tumor necrosis factor receptor superfamily, member 8
chr4	145011994;145012202	145012175;145014549	-	145011994	145014549	cassetteExon	0.5	100	100	ENSMUST00000030339.13	ENSMUSG00000028602.13	Tnfrsf8	chr4	protein_coding	tumor necrosis factor receptor superfamily, member 8
chr4	145138850	145176037	+	145138850	145159037	3pMXE	0.5	50	50	ENSMUST00000143127.8	ENSMUSG00000085101.8	Platr16	chr4	lncRNA	pluripotency associated transcript 16
chr4	145174577	145176037	+	145138850	145176037	A5SS	0.5	50	50	ENSMUST00000150529.2	ENSMUSG00000085101.8	Platr16	chr4	lncRNA	pluripotency associated transcript 16
chr4	145237495;145247455	145247376;145257382	+	145237495	145257382	cassetteExon	0.5	100	100	ENSMUST00000105742.8	ENSMUSG00000078503.10	Zfp990	chr4	protein_coding	zinc finger protein 990
chr4	145237495	145238294	+	145237495	145257382	A3SS	0.33	50	50	ENSMUST00000105742.8	ENSMUSG00000078503.10	Zfp990	chr4	protein_coding	zinc finger protein 990
chr4	145255434	145257382	+	145237495	145257382	A5SS	0.33	50	50	ENSMUST00000105742.8	ENSMUSG00000078503.10	Zfp990	chr4	protein_coding	zinc finger protein 990
chr4	145237495	145247376	+	145237495	145238294	3pMXE	0.33	50	50	ENSMUST00000128939.2	ENSMUSG00000078503.10	Zfp990	chr4	protein_coding	zinc finger protein 990
chr4	145247455	145257382	+	145247455;145255434	145255261;145257382	ES	0.33	50	50	ENSMUST00000136309.8	ENSMUSG00000078503.10	Zfp990	chr4	protein_coding	zinc finger protein 990
chr4	145241588	145247376	+	145237495	145247376	A5SS	0.5	50	50	ENSMUST00000136309.8	ENSMUSG00000078503.10	Zfp990	chr4	protein_coding	zinc finger protein 990
chr4	145311904	145343688	+	145311904	145343641	A3SS	0.5	50	50	ENSMUST00000105739.8	ENSMUSG00000078502.11	Zfp268	chr4	protein_coding	zinc finger protein 268
chr4	146034016	146036320	+	146034016	146035051	3pMXE	0.33	50	50	ENSMUST00000154939.2	ENSMUSG00000066009.9	Zfp987	chr4	protein_coding	zinc finger protein 987
chr4	146034016	146054376	+	146034016	146035051	3pMXE	0.33	50	50	ENSMUST00000154939.2	ENSMUSG00000066009.9	Zfp987	chr4	protein_coding	zinc finger protein 987
chr4	146034016	146054376	+	146034016;146036396	146036320;146054376	ES	0.5	50	50	ENSMUST00000105730.2	ENSMUSG00000066009.9	Zfp987	chr4	protein_coding	zinc finger protein 987
chr4	146094317	146094928	+	146093547	146094928	A5SS	0.5	50	50	ENSMUST00000151278.8	ENSMUSG00000066007.16	Zfp600	chr4	protein_coding	zinc finger protein 600
chr4	146102185	146126782	+	146095021	146126782	A5SS	0.5	50	50	ENSMUST00000168483.9	ENSMUSG00000066007.16	Zfp600	chr4	protein_coding	zinc finger protein 600
chr4	146104263	146142218	-	146104263	146141717	5pMXE	0.5	50	50	ENSMUST00000152923.2	ENSMUSG00000086654.2	Gm13165	chr4	lncRNA	predicted gene 13165
chr4	146188929	146209453	+	146188929	146189620	3pMXE	0.5	50	50	ENSMUST00000123828.2	ENSMUSG00000085525.8	Gm13166	chr4	lncRNA	predicted gene 13166
chr4	146207051	146209453	+	146188929	146209453	A5SS	0.5	50	50	ENSMUST00000154592.8	ENSMUSG00000085525.8	Gm13166	chr4	lncRNA	predicted gene 13166
chr4	146209545	146214923	+	146209545	146214879	A3SS	0.33	50	50	ENSMUST00000146671.8	ENSMUSG00000085525.8	Gm13166	chr4	lncRNA	predicted gene 13166
chr4	146209545	146214926	+	146209545	146214879	A3SS	0.33	50	50	ENSMUST00000146671.8	ENSMUSG00000085525.8	Gm13166	chr4	lncRNA	predicted gene 13166
chr4	146209545	146214926	+	146209545	146214923	A3SS	0.33	50	50	ENSMUST00000144166.8	ENSMUSG00000085525.8	Gm13166	chr4	lncRNA	predicted gene 13166
chr4	146599499	146616527	+	146597334	146616527	A5SS	0.5	50	50	ENSMUST00000105735.9	ENSMUSG00000056300.15	Zfp981	chr4	protein_coding	zinc finger protein 981
chr4	146982272	146991978	-	146982272	146993883	A5SS	0.5	50	50	ENSMUST00000238583.2	ENSMUSG00000045699.5	Gm21411	chr4	protein_coding	predicted gene, 21411
chr4	147235031	147249798	+	147224576	147249798	A5SS	0.5	50	50	ENSMUST00000084149.10	ENSMUSG00000067916.10	Zfp991	chr4	protein_coding	zinc finger protein 991
chr4	147249866	147260304	+	147249843	147260304	A5SS	0.5	50	50	ENSMUST00000084149.10	ENSMUSG00000067916.10	Zfp991	chr4	protein_coding	zinc finger protein 991
chr4	147337858;147341375	147341253;147342851	+	147337858	147342851	cassetteExon	0.5	100	100	ENSMUST00000125785.8	ENSMUSG00000087207.9	Gm13147	chr4	transcribed_unprocessed_pseudogene	predicted gene 13147
chr4	147445909	147447268	+	147445938	147447268	A5SS	0.5	50	50	ENSMUST00000133078.8	ENSMUSG00000078497.10	Zfp978	chr4	protein_coding	zinc finger protein 978
chr4	147637883	147646899	+	147637883	147661529	A3SS	0.5	50	50	ENSMUST00000139784.8	ENSMUSG00000065999.14	Zfp985	chr4	protein_coding	zinc finger protein 985
chr4	147647415	147661529	+	147637883	147661529	A5SS	0.5	50	50	ENSMUST00000139784.8	ENSMUSG00000065999.14	Zfp985	chr4	protein_coding	zinc finger protein 985
chr4	147647415	147661529	+	147647415	147661482	A3SS	0.5	50	50	ENSMUST00000143885.8	ENSMUSG00000065999.14	Zfp985	chr4	protein_coding	zinc finger protein 985
chr4	147725462	147726821	-	147725462	147726792	A5SS	0.5	50	50	ENSMUST00000105720.8	ENSMUSG00000066000.13	Zfp979	chr4	protein_coding	zinc finger protein 979
chr4	147868954	147880115	-	147845735	147880115	A3SS	0.5	50	50	ENSMUST00000105734.10	ENSMUSG00000078495.11	Zfp984	chr4	protein_coding	zinc finger protein 984
chr4	147880184	147891547	-	147880181	147891547	A3SS	0.5	50	50	ENSMUST00000105734.10	ENSMUSG00000078495.11	Zfp984	chr4	protein_coding	zinc finger protein 984
chr4	147913253;147917703	147917672;147932735	-	147913253	147932735	cassetteExon	0.5	100	100	ENSMUST00000105718.8	ENSMUSG00000059423.14	Zfp933	chr4	protein_coding	zinc finger protein 933
chr4	147947406	147949646	-	147947406;147947593	147947485;147949646	ES	0.33	50	50	ENSMUST00000030886.15	ENSMUSG00000029022.19	Miip	chr4	protein_coding	migration and invasion inhibitory protein
chr4	147945470	147945811	-	147945542	147945811	A3SS	0.5	50	50	ENSMUST00000030886.15	ENSMUSG00000029022.19	Miip	chr4	protein_coding	migration and invasion inhibitory protein
chr4	147948378	147949646	-	147947593	147949646	A3SS	0.33	50	50	ENSMUST00000030886.15	ENSMUSG00000029022.19	Miip	chr4	protein_coding	migration and invasion inhibitory protein
chr4	147952640	147952826	-	147950876	147952826	A3SS	0.5	50	50	ENSMUST00000030886.15	ENSMUSG00000029022.19	Miip	chr4	protein_coding	migration and invasion inhibitory protein
chr4	147949727	147950323	-	147949727	147950112	A5SS	0.5	50	50	ENSMUST00000030886.15	ENSMUSG00000029022.19	Miip	chr4	protein_coding	migration and invasion inhibitory protein
chr4	147950876	147951788	-	147950876	147952826	A5SS	0.25	50	50	ENSMUST00000030886.15	ENSMUSG00000029022.19	Miip	chr4	protein_coding	migration and invasion inhibitory protein
chr4	147950876	147952878	-	147950876	147952826	A5SS	0.25	50	50	ENSMUST00000030886.15	ENSMUSG00000029022.19	Miip	chr4	protein_coding	migration and invasion inhibitory protein
chr4	147950876	147952959	-	147950876	147952826	A5SS	0.25	50	50	ENSMUST00000030886.15	ENSMUSG00000029022.19	Miip	chr4	protein_coding	migration and invasion inhibitory protein
chr4	147950876	147951788	-	147950876	147952959	A5SS	0.25	50	50	ENSMUST00000172710.8	ENSMUSG00000029022.19	Miip	chr4	protein_coding	migration and invasion inhibitory protein
chr4	147950876	147952878	-	147950876	147952959	A5SS	0.25	50	50	ENSMUST00000172710.8	ENSMUSG00000029022.19	Miip	chr4	protein_coding	migration and invasion inhibitory protein
chr4	147950876	147952878	-	147950876	147951788	A5SS&ES	0.33	50	50	ENSMUST00000119975.3	ENSMUSG00000029022.19	Miip	chr4	protein_coding	migration and invasion inhibitory protein
chr4	147948378	147949646	-	147947406	147949646	A3SS	0.33	50	50	ENSMUST00000141534.3	ENSMUSG00000029022.19	Miip	chr4	protein_coding	migration and invasion inhibitory protein
chr4	147983099;147987467	147987385;147987812	-	147983099	147987812	cassetteExon	0.5	100	100	ENSMUST00000105716.9	ENSMUSG00000029020.14	Mfn2	chr4	protein_coding	mitofusin 2
chr4	147971805	147971872	-	147971770	147971872	A3SS	0.5	50	50	ENSMUST00000105716.9	ENSMUSG00000029020.14	Mfn2	chr4	protein_coding	mitofusin 2
chr4	147971831	147973077	-	147971980	147973077	A3SS&ES	0.5	50	50	ENSMUST00000105716.9	ENSMUSG00000029020.14	Mfn2	chr4	protein_coding	mitofusin 2
chr4	147987954	147988846	-	147987954	147989115	A5SS	0.33	50	50	ENSMUST00000105716.9	ENSMUSG00000029020.14	Mfn2	chr4	protein_coding	mitofusin 2
chr4	147987954	147988907	-	147987954	147989115	A5SS	0.33	50	50	ENSMUST00000105716.9	ENSMUSG00000029020.14	Mfn2	chr4	protein_coding	mitofusin 2
chr4	147987954	147988846	-	147987954	147988907	A5SS	0.33	50	50	ENSMUST00000105715.8	ENSMUSG00000029020.14	Mfn2	chr4	protein_coding	mitofusin 2
chr4	148000400;148000803	148000663;148001762	-	148000400	148001762	cassetteExon	0.5	100	100	ENSMUST00000019199.14	ENSMUSG00000019055.16	Plod1	chr4	protein_coding	procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
chr4	148012438	148012915	-	148011577	148012915	A3SS	0.5	50	50	ENSMUST00000019199.14	ENSMUSG00000019055.16	Plod1	chr4	protein_coding	procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
chr4	148016304	148017188	-	148016220	148017188	A3SS	0.5	50	50	ENSMUST00000019199.14	ENSMUSG00000019055.16	Plod1	chr4	protein_coding	procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
chr4	148007702	148008069	-	148007702	148009974	A5SS	0.5	50	50	ENSMUST00000019199.14	ENSMUSG00000019055.16	Plod1	chr4	protein_coding	procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
chr4	148095233	148095429	-	148095267	148095429	A3SS	0.5	50	50	ENSMUST00000137724.8	ENSMUSG00000029016.14	Clcn6	chr4	protein_coding	chloride channel, voltage-sensitive 6
chr4	148108672	148110990	-	148108681	148110990	A3SS	0.33	50	50	ENSMUST00000137724.8	ENSMUSG00000029016.14	Clcn6	chr4	protein_coding	chloride channel, voltage-sensitive 6
chr4	148109209	148110990	-	148108681	148110990	A3SS	0.33	50	50	ENSMUST00000137724.8	ENSMUSG00000029016.14	Clcn6	chr4	protein_coding	chloride channel, voltage-sensitive 6
chr4	148122430	148122603	-	148122430	148123138	A5SS	0.5	50	50	ENSMUST00000137724.8	ENSMUSG00000029016.14	Clcn6	chr4	protein_coding	chloride channel, voltage-sensitive 6
chr4	148109209	148110990	-	148108672	148110990	A3SS	0.33	50	50	ENSMUST00000030879.12	ENSMUSG00000029016.14	Clcn6	chr4	protein_coding	chloride channel, voltage-sensitive 6
chr4	148123866	148126041	+	148123589	148126041	A5SS	0.33	50	50	ENSMUST00000097788.11	ENSMUSG00000029009.18	Mthfr	chr4	protein_coding	methylenetetrahydrofolate reductase
chr4	148125778	148126041	+	148123589	148126041	A5SS	0.33	50	50	ENSMUST00000097788.11	ENSMUSG00000029009.18	Mthfr	chr4	protein_coding	methylenetetrahydrofolate reductase
chr4	148125778	148126041	+	148123866	148126041	A5SS	0.33	50	50	ENSMUST00000141283.8	ENSMUSG00000029009.18	Mthfr	chr4	protein_coding	methylenetetrahydrofolate reductase
chr4	148141590	148142835	+	148141590	148141832	A3SS	0.5	50	50	ENSMUST00000152498.8	ENSMUSG00000029009.18	Mthfr	chr4	protein_coding	methylenetetrahydrofolate reductase
chr4	148168450	148169038	-	148168450	148172374	A5SS	0.5	50	50	ENSMUST00000030865.9	ENSMUSG00000029007.9	Agtrap	chr4	protein_coding	angiotensin II, type I receptor-associated protein
chr4	148229184	148229583	+	148229184	148229561	A3SS	0.5	50	50	ENSMUST00000084129.9	ENSMUSG00000029003.12	Mad2l2	chr4	protein_coding	MAD2 mitotic arrest deficient-like 2
chr4	148224940	148225242	+	148224477	148225242	A5SS	0.5	50	50	ENSMUST00000084129.9	ENSMUSG00000029003.12	Mad2l2	chr4	protein_coding	MAD2 mitotic arrest deficient-like 2
chr4	148234123	148236399	-	148234123	148235545	5pMXE	0.2	50	50	ENSMUST00000105706.8	ENSMUSG00000055401.15	Fbxo6	chr4	protein_coding	F-box protein 6
chr4	148234123	148236470	-	148234123	148235545	5pMXE	0.2	50	50	ENSMUST00000105706.8	ENSMUSG00000055401.15	Fbxo6	chr4	protein_coding	F-box protein 6
chr4	148234123	148236071	-	148234123	148235545	A5SS	0.2	50	50	ENSMUST00000105706.8	ENSMUSG00000055401.15	Fbxo6	chr4	protein_coding	F-box protein 6
chr4	148234123	148236287	-	148234123	148235545	A5SS	0.2	50	50	ENSMUST00000105706.8	ENSMUSG00000055401.15	Fbxo6	chr4	protein_coding	F-box protein 6
chr4	148234123	148236071	-	148234123	148236470	A5SS	0.2	50	50	ENSMUST00000168503.8	ENSMUSG00000055401.15	Fbxo6	chr4	protein_coding	F-box protein 6
chr4	148234123	148236287	-	148234123	148236470	A5SS	0.2	50	50	ENSMUST00000168503.8	ENSMUSG00000055401.15	Fbxo6	chr4	protein_coding	F-box protein 6
chr4	148234123	148236399	-	148234123	148236470	A5SS	0.2	50	50	ENSMUST00000168503.8	ENSMUSG00000055401.15	Fbxo6	chr4	protein_coding	F-box protein 6
chr4	148234123	148236399	-	148234123	148236071	5pMXE	0.2	50	50	ENSMUST00000030858.14	ENSMUSG00000055401.15	Fbxo6	chr4	protein_coding	F-box protein 6
chr4	148234123;148235627	148235545;148236071	-	148234123	148236071	cassetteExon	0.5	100	100	ENSMUST00000030858.14	ENSMUSG00000055401.15	Fbxo6	chr4	protein_coding	F-box protein 6
chr4	148234123	148236287	-	148234123	148236071	A5SS	0.2	50	50	ENSMUST00000030858.14	ENSMUSG00000055401.15	Fbxo6	chr4	protein_coding	F-box protein 6
chr4	148234123	148236287	-	148234123	148236399	A5SS	0.2	50	50	ENSMUST00000056965.12	ENSMUSG00000055401.15	Fbxo6	chr4	protein_coding	F-box protein 6
chr4	148243280	148244200	-	148243280	148243972	5pMXE	0.25	50	50	ENSMUST00000167160.8	ENSMUSG00000029001.16	Fbxo44	chr4	protein_coding	F-box protein 44
chr4	148243280	148244491	-	148243280	148243972	5pMXE	0.25	50	50	ENSMUST00000167160.8	ENSMUSG00000029001.16	Fbxo44	chr4	protein_coding	F-box protein 44
chr4	148243280	148244773	-	148243280	148243972	5pMXE	0.25	50	50	ENSMUST00000167160.8	ENSMUSG00000029001.16	Fbxo44	chr4	protein_coding	F-box protein 44
chr4	148238101;148238698	148238615;148240603	-	148238101	148240603	cassetteExon	0.5	100	100	ENSMUST00000167160.8	ENSMUSG00000029001.16	Fbxo44	chr4	protein_coding	F-box protein 44
chr4	148238101;148238890	148238615;148240603	-	148238101	148240603	cassetteExon	0.5	100	100	ENSMUST00000167160.8	ENSMUSG00000029001.16	Fbxo44	chr4	protein_coding	F-box protein 44
chr4	148238101;148238890	148238744;148240603	-	148238101	148240603	cassetteExon	0.5	100	100	ENSMUST00000167160.8	ENSMUSG00000029001.16	Fbxo44	chr4	protein_coding	F-box protein 44
chr4	148240738	148241066	-	148240738	148240852	A5SS&ES	0.5	50	50	ENSMUST00000167160.8	ENSMUSG00000029001.16	Fbxo44	chr4	protein_coding	F-box protein 44
chr4	148240947	148241066	-	148240947	148241037	A5SS	0.33	50	50	ENSMUST00000167160.8	ENSMUSG00000029001.16	Fbxo44	chr4	protein_coding	F-box protein 44
chr4	148240947	148241114	-	148240947	148241037	A5SS	0.33	50	50	ENSMUST00000167160.8	ENSMUSG00000029001.16	Fbxo44	chr4	protein_coding	F-box protein 44
chr4	148243280	148244773	-	148243280	148244200	5pMXE	0.25	50	50	ENSMUST00000057907.10	ENSMUSG00000029001.16	Fbxo44	chr4	protein_coding	F-box protein 44
chr4	148243280	148244491	-	148243280	148244200	A5SS	0.25	50	50	ENSMUST00000057907.10	ENSMUSG00000029001.16	Fbxo44	chr4	protein_coding	F-box protein 44
chr4	148243280	148244773	-	148243280	148244491	5pMXE	0.25	50	50	ENSMUST00000129253.8	ENSMUSG00000029001.16	Fbxo44	chr4	protein_coding	F-box protein 44
chr4	148238101;148238890	148238744;148240603	-	148238101;148238698	148238615;148240603	MXE	0.5	100	100	ENSMUST00000129253.8	ENSMUSG00000029001.16	Fbxo44	chr4	protein_coding	F-box protein 44
chr4	148240738;148240947	148240852;148241066	-	148240738	148241066	cassetteExon	0.5	100	100	ENSMUST00000105705.9	ENSMUSG00000029001.16	Fbxo44	chr4	protein_coding	F-box protein 44
chr4	148240947	148241114	-	148240947	148241066	A5SS	0.33	50	50	ENSMUST00000172472.8	ENSMUSG00000029001.16	Fbxo44	chr4	protein_coding	F-box protein 44
chr4	148660361	148662875	+	148660361;148660681	148660607;148662875	ES	0.5	50	50	ENSMUST00000017408.14	ENSMUSG00000017264.17	Exosc10	chr4	protein_coding	exosome component 10
chr4	148663914	148665559	+	148663914;148664987	148664816;148665559	ES	0.5	50	50	ENSMUST00000017408.14	ENSMUSG00000017264.17	Exosc10	chr4	protein_coding	exosome component 10
chr4	148647592;148648153	148648044;148648301	+	148647592	148648301	cassetteExon	0.5	100	100	ENSMUST00000017408.14	ENSMUSG00000017264.17	Exosc10	chr4	protein_coding	exosome component 10
chr4	148665620	148666219	+	148665620	148666215	A3SS	0.5	50	50	ENSMUST00000017408.14	ENSMUSG00000017264.17	Exosc10	chr4	protein_coding	exosome component 10
chr4	148657486	148657568	+	148657426	148657568	A5SS	0.5	50	50	ENSMUST00000017408.14	ENSMUSG00000017264.17	Exosc10	chr4	protein_coding	exosome component 10
chr4	148660361	148662875	+	148660361	148660607	3pMXE	0.5	50	50	ENSMUST00000173767.8	ENSMUSG00000017264.17	Exosc10	chr4	protein_coding	exosome component 10
chr4	148660361	148662875	+	148660681	148662875	5pMXE	0.5	50	50	ENSMUST00000173892.2	ENSMUSG00000017264.17	Exosc10	chr4	protein_coding	exosome component 10
chr4	148678662	148679316	+	148678662	148678744	3pMXE	0.5	50	50	ENSMUST00000006611.9	ENSMUSG00000006442.11	Srm	chr4	protein_coding	spermidine synthase
chr4	148688275	148690037	+	148688275	148688713	3pMXE	0.5	50	50	ENSMUST00000105701.9	ENSMUSG00000028979.18	Masp2	chr4	protein_coding	mannan-binding lectin serine peptidase 2
chr4	148703248	148705049	-	148703248;148703811	148703641;148705049	ES	0.5	50	50	ENSMUST00000165113.8	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148705189	148709582	-	148705189;148706569	148706406;148709582	ES	0.5	50	50	ENSMUST00000165113.8	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148700286	148703122	-	148702162	148703122	A3SS	0.2	50	50	ENSMUST00000165113.8	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148702092	148703122	-	148702162	148703122	A3SS	0.2	50	50	ENSMUST00000165113.8	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148702194	148703122	-	148702162	148703122	A3SS	0.2	50	50	ENSMUST00000165113.8	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148702282	148703122	-	148702162	148703122	A3SS	0.2	50	50	ENSMUST00000165113.8	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148702162	148703104	-	148702162	148703122	A5SS	0.33	50	50	ENSMUST00000165113.8	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148702162	148703131	-	148702162	148703122	A5SS	0.33	50	50	ENSMUST00000165113.8	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148709833	148710502	-	148709833	148711138	A5SS	0.5	50	50	ENSMUST00000165113.8	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148702282	148703104	-	148702162	148703104	A3SS	0.5	50	50	ENSMUST00000172073.8	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148702162	148703131	-	148702162	148703104	A5SS	0.33	50	50	ENSMUST00000172073.8	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148700286	148703122	-	148702092	148703122	A3SS	0.2	50	50	ENSMUST00000105702.9	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148702194	148703122	-	148702092	148703122	A3SS	0.2	50	50	ENSMUST00000105702.9	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148702282	148703122	-	148702092	148703122	A3SS	0.2	50	50	ENSMUST00000105702.9	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148700286	148702023	-	148700286;148701301	148701029;148702023	ES	0.25	50	50	ENSMUST00000188134.7	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148701062	148702023	-	148701301	148702023	A3SS	0.25	50	50	ENSMUST00000188134.7	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148701500	148702023	-	148701301	148702023	A3SS	0.25	50	50	ENSMUST00000188134.7	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148700286;148702092	148702023;148703122	-	148700286	148703122	cassetteExon	0.5	100	100	ENSMUST00000188488.2	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148700286;148702162	148702023;148703122	-	148700286	148703122	cassetteExon	0.5	100	100	ENSMUST00000188488.2	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148700286;148702194	148702023;148703122	-	148700286	148703122	cassetteExon	0.5	100	100	ENSMUST00000188488.2	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148700286;148702282	148702023;148703122	-	148700286	148703122	cassetteExon	0.5	100	100	ENSMUST00000188488.2	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148700286	148701029	-	148700286	148703122	A5SS	0.33	50	50	ENSMUST00000188488.2	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148703248	148705049	-	148703248	148703641	5pMXE	0.5	50	50	ENSMUST00000186729.7	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148700286;148701062	148701029;148702023	-	148700286	148702023	cassetteExon	0.5	100	100	ENSMUST00000186729.7	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148700286;148701500	148701029;148702023	-	148700286	148702023	cassetteExon	0.5	100	100	ENSMUST00000186729.7	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148702194	148703131	-	148702162	148703131	A3SS	0.33	50	50	ENSMUST00000186729.7	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148702282	148703131	-	148702162	148703131	A3SS	0.33	50	50	ENSMUST00000186729.7	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148700286	148703122	-	148700286	148702023	A5SS&ES	0.33	50	50	ENSMUST00000186729.7	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148701500	148702023	-	148701062	148702023	A3SS	0.25	50	50	ENSMUST00000189041.2	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148700286	148702023	-	148700286	148701029	5pMXE	0.33	50	50	ENSMUST00000187937.2	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148700286	148702023	-	148701301	148702023	3pMXE	0.25	50	50	ENSMUST00000045180.14	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148705189	148709582	-	148705189	148706406	5pMXE	0.5	50	50	ENSMUST00000190552.7	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148702194	148703122	-	148702282	148703122	A3SS	0.25	50	50	ENSMUST00000140897.8	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148702282	148703104	-	148702282	148703122	A5SS	0.33	50	50	ENSMUST00000140897.8	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148702282	148703131	-	148702282	148703122	A5SS	0.33	50	50	ENSMUST00000140897.8	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148702194	148703131	-	148702194	148703122	A5SS	0.5	50	50	ENSMUST00000191378.7	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148702194	148703131	-	148702282	148703131	A3SS	0.33	50	50	ENSMUST00000191450.7	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148702282	148703104	-	148702282	148703131	A5SS	0.33	50	50	ENSMUST00000191450.7	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148700286	148702023	-	148701500	148702023	3pMXE	0.25	50	50	ENSMUST00000187939.7	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148700286	148703122	-	148702282	148703122	3pMXE	0.2	50	50	ENSMUST00000190630.7	ENSMUSG00000041459.16	Tardbp	chr4	protein_coding	TAR DNA binding protein
chr4	148974833	148975413	+	148974833	148986162	A3SS	0.5	50	50	ENSMUST00000094464.10	ENSMUSG00000028977.18	Casz1	chr4	protein_coding	castor zinc finger 1
chr4	148973941	148974779	+	148922877	148974779	A5SS	0.5	50	50	ENSMUST00000094464.10	ENSMUSG00000028977.18	Casz1	chr4	protein_coding	castor zinc finger 1
chr4	148985770	148986162	+	148974833	148986162	A5SS	0.5	50	50	ENSMUST00000094464.10	ENSMUSG00000028977.18	Casz1	chr4	protein_coding	castor zinc finger 1
chr4	149033391;149034227	149033928;149035902	+	149033391	149035902	cassetteExon	0.5	100	100	ENSMUST00000122222.8	ENSMUSG00000028977.18	Casz1	chr4	protein_coding	castor zinc finger 1
chr4	149044879	149045843	+	149044879	149051190	A3SS	0.5	50	50	ENSMUST00000145143.2	ENSMUSG00000086740.2	Gm17029	chr4	lncRNA	predicted gene 17029
chr4	149048271	149051190	+	149044879	149051190	A5SS	0.5	50	50	ENSMUST00000145143.2	ENSMUSG00000086740.2	Gm17029	chr4	lncRNA	predicted gene 17029
chr4	149044879	149045843	+	149044879	149056480	A3SS	0.33	50	50	ENSMUST00000146124.2	ENSMUSG00000086740.2	Gm17029	chr4	lncRNA	predicted gene 17029
chr4	149044879	149051190	+	149044879	149056480	A3SS	0.33	50	50	ENSMUST00000146124.2	ENSMUSG00000086740.2	Gm17029	chr4	lncRNA	predicted gene 17029
chr4	149044879	149051190	+	149044879;149048271	149045843;149051190	ES	0.5	50	50	ENSMUST00000153443.2	ENSMUSG00000086740.2	Gm17029	chr4	lncRNA	predicted gene 17029
chr4	149068622;149115733	149115608;149126178	-	149068622	149126178	cassetteExon	0.5	100	100	ENSMUST00000103217.11	ENSMUSG00000028975.17	Pex14	chr4	protein_coding	peroxisomal biogenesis factor 14
chr4	149099166	149126178	-	149068622	149126178	A3SS	0.33	50	50	ENSMUST00000103217.11	ENSMUSG00000028975.17	Pex14	chr4	protein_coding	peroxisomal biogenesis factor 14
chr4	149099166	149126178	-	149115733	149126178	A3SS&ES	0.33	50	50	ENSMUST00000134747.2	ENSMUSG00000028975.17	Pex14	chr4	protein_coding	peroxisomal biogenesis factor 14
chr4	149192368	149192556	+	149192368	149201865	A3SS	0.5	50	50	ENSMUST00000103216.10	ENSMUSG00000028974.14	Dffa	chr4	protein_coding	DNA fragmentation factor, alpha subunit
chr4	149214676	149216096	-	149211894	149216096	A3SS	0.5	50	50	ENSMUST00000105696.8	ENSMUSG00000073705.11	Cenps	chr4	protein_coding	centromere protein S
chr4	149216889	149221933	-	149216839	149221933	A3SS	0.5	50	50	ENSMUST00000105696.8	ENSMUSG00000073705.11	Cenps	chr4	protein_coding	centromere protein S
chr4	149216129	149216735	-	149216129	149216716	A5SS	0.5	50	50	ENSMUST00000105696.8	ENSMUSG00000073705.11	Cenps	chr4	protein_coding	centromere protein S
chr4	149216839	149217046	-	149216839	149221933	A5SS	0.5	50	50	ENSMUST00000105696.8	ENSMUSG00000073705.11	Cenps	chr4	protein_coding	centromere protein S
chr4	149288751	149291175	-	149288751;149290343	149290143;149291175	ES	0.5	50	50	ENSMUST00000238956.2	ENSMUSG00000063077.16	Kif1b	chr4	protein_coding	kinesin family member 1B
chr4	149348147	149350709	-	149348147;149349819	149349802;149350709	ES	0.5	50	50	ENSMUST00000238956.2	ENSMUSG00000063077.16	Kif1b	chr4	protein_coding	kinesin family member 1B
chr4	149277144;149279956	149279930;149282889	-	149277144	149282889	cassetteExon	0.5	100	100	ENSMUST00000238956.2	ENSMUSG00000063077.16	Kif1b	chr4	protein_coding	kinesin family member 1B
chr4	149322940	149329795	-	149310813	149329795	A3SS	0.5	50	50	ENSMUST00000238956.2	ENSMUSG00000063077.16	Kif1b	chr4	protein_coding	kinesin family member 1B
chr4	149342460	149346593	-	149345658	149346593	A3SS&ES	0.5	50	50	ENSMUST00000238956.2	ENSMUSG00000063077.16	Kif1b	chr4	protein_coding	kinesin family member 1B
chr4	149449994	149455616	-	149449994;149452872	149452758;149455616	ES	0.5	50	50	ENSMUST00000103212.10	ENSMUSG00000028960.21	Ube4b	chr4	protein_coding	ubiquitination factor E4B
chr4	149471673	149510339	-	149471673;149483242	149483056;149510339	ES	0.5	50	50	ENSMUST00000103212.10	ENSMUSG00000028960.21	Ube4b	chr4	protein_coding	ubiquitination factor E4B
chr4	149419792	149421842	-	149419760	149421842	A3SS	0.5	50	50	ENSMUST00000103212.10	ENSMUSG00000028960.21	Ube4b	chr4	protein_coding	ubiquitination factor E4B
chr4	149465228	149465640	-	149457426	149465640	A3SS	0.5	50	50	ENSMUST00000103212.10	ENSMUSG00000028960.21	Ube4b	chr4	protein_coding	ubiquitination factor E4B
chr4	149419760	149420163	-	149419760	149421842	A5SS	0.5	50	50	ENSMUST00000103212.10	ENSMUSG00000028960.21	Ube4b	chr4	protein_coding	ubiquitination factor E4B
chr4	149457426	149463729	-	149457426	149465640	A5SS	0.33	50	50	ENSMUST00000103212.10	ENSMUSG00000028960.21	Ube4b	chr4	protein_coding	ubiquitination factor E4B
chr4	149457426	149464491	-	149457426	149465640	A5SS	0.33	50	50	ENSMUST00000103212.10	ENSMUSG00000028960.21	Ube4b	chr4	protein_coding	ubiquitination factor E4B
chr4	149471673	149471883	-	149471673	149483056	A5SS	0.33	50	50	ENSMUST00000103212.10	ENSMUSG00000028960.21	Ube4b	chr4	protein_coding	ubiquitination factor E4B
chr4	149483242	149483664	-	149483242	149510339	A5SS	0.5	50	50	ENSMUST00000103212.10	ENSMUSG00000028960.21	Ube4b	chr4	protein_coding	ubiquitination factor E4B
chr4	149457426	149464491	-	149457426;149463866	149463729;149464491	ES	0.5	50	50	ENSMUST00000239095.2	ENSMUSG00000028960.21	Ube4b	chr4	protein_coding	ubiquitination factor E4B
chr4	149471673	149471883	-	149471673	149510339	A5SS	0.33	50	50	ENSMUST00000172643.8	ENSMUSG00000028960.21	Ube4b	chr4	protein_coding	ubiquitination factor E4B
chr4	149471673	149510339	-	149483242	149510339	3pMXE	0.5	50	50	ENSMUST00000173005.2	ENSMUSG00000028960.21	Ube4b	chr4	protein_coding	ubiquitination factor E4B
chr4	149534380	149537306	-	149534380;149535807	149535709;149537306	ES	0.5	50	50	ENSMUST00000148596.8	ENSMUSG00000028996.10	Rbp7	chr4	protein_coding	retinol binding protein 7, cellular
chr4	149537407	149539335	-	149537407	149537813	5pMXE	0.5	50	50	ENSMUST00000148596.8	ENSMUSG00000028996.10	Rbp7	chr4	protein_coding	retinol binding protein 7, cellular
chr4	149537407	149539335	-	149537407;149537991	149537813;149539335	ES	0.5	50	50	ENSMUST00000030848.3	ENSMUSG00000028996.10	Rbp7	chr4	protein_coding	retinol binding protein 7, cellular
chr4	149559052;149564374	149564201;149569566	-	149559052	149569566	cassetteExon	0.5	100	100	ENSMUST00000119921.8	ENSMUSG00000028992.14	Nmnat1	chr4	protein_coding	nicotinamide nucleotide adenylyltransferase 1
chr4	149559052	149569360	-	149559052	149569566	A5SS	0.33	50	50	ENSMUST00000119921.8	ENSMUSG00000028992.14	Nmnat1	chr4	protein_coding	nicotinamide nucleotide adenylyltransferase 1
chr4	149559052	149564201	-	149559052	149569360	A5SS	0.33	50	50	ENSMUST00000105693.2	ENSMUSG00000028992.14	Nmnat1	chr4	protein_coding	nicotinamide nucleotide adenylyltransferase 1
chr4	149563313	149564879	+	149563313;149564180	149564101;149564879	ES	0.5	50	50	ENSMUST00000210722.3	ENSMUSG00000087198.5	Tmem274	chr4	protein_coding	transmembrame protein 274
chr4	149569730;149570049	149569826;149570319	+	149569730	149570319	cassetteExon	0.5	100	100	ENSMUST00000124413.8	ENSMUSG00000028990.14	Lzic	chr4	protein_coding	leucine zipper and CTNNBIP1 domain containing
chr4	149569730	149570319	+	149569730	149569826	A3SS&ES	0.5	50	50	ENSMUST00000141293.8	ENSMUSG00000028990.14	Lzic	chr4	protein_coding	leucine zipper and CTNNBIP1 domain containing
chr4	149570049	149570319	+	149570049	149570315	A3SS	0.5	50	50	ENSMUST00000141293.8	ENSMUSG00000028990.14	Lzic	chr4	protein_coding	leucine zipper and CTNNBIP1 domain containing
chr4	149569730	149570319	+	149570049	149570319	5pMXE	0.5	50	50	ENSMUST00000146427.2	ENSMUSG00000028990.14	Lzic	chr4	protein_coding	leucine zipper and CTNNBIP1 domain containing
chr4	149629691	149630168	+	149624370	149630168	A5SS	0.5	50	50	ENSMUST00000030839.13	ENSMUSG00000028988.14	Ctnnbip1	chr4	protein_coding	catenin beta interacting protein 1
chr4	149698629;149710573	149710544;149711669	+	149698629	149711669	cassetteExon	0.5	100	100	ENSMUST00000105691.8	ENSMUSG00000039953.14	Clstn1	chr4	protein_coding	calsyntenin 1
chr4	149671795	149698507	+	149671229	149698507	A5SS	0.5	50	50	ENSMUST00000105691.8	ENSMUSG00000039953.14	Clstn1	chr4	protein_coding	calsyntenin 1
chr4	149758651	149785960	-	149758651	149783012	5pMXE	0.12	50	50	ENSMUST00000038859.14	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149758651	149786921	-	149758651	149783012	5pMXE	0.12	50	50	ENSMUST00000038859.14	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149758651;149781680	149781506;149783012	-	149758651	149783012	cassetteExon	0.5	100	100	ENSMUST00000038859.14	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149738592	149738682	-	149738595	149738682	A3SS	0.5	50	50	ENSMUST00000038859.14	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149739714	149739793	-	149739705	149739793	A3SS	0.5	50	50	ENSMUST00000038859.14	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149739957	149740038	-	149739960	149740038	A3SS	0.5	50	50	ENSMUST00000038859.14	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149741912	149742839	-	149741924	149742839	A3SS	0.5	50	50	ENSMUST00000038859.14	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149758418	149758533	-	149747773	149758533	A3SS	0.5	50	50	ENSMUST00000038859.14	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149747773	149758597	-	149747773	149758533	A5SS	0.5	50	50	ENSMUST00000038859.14	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149758651	149759594	-	149758651	149783012	A5SS	0.12	50	50	ENSMUST00000038859.14	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149758651	149759971	-	149758651	149783012	A5SS	0.12	50	50	ENSMUST00000038859.14	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149758651	149760369	-	149758651	149783012	A5SS	0.12	50	50	ENSMUST00000038859.14	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149758651	149782913	-	149758651	149783012	A5SS	0.12	50	50	ENSMUST00000038859.14	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149758651	149786921	-	149758651	149785960	5pMXE	0.12	50	50	ENSMUST00000122059.8	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149758651	149759594	-	149758651	149785960	A5SS	0.12	50	50	ENSMUST00000122059.8	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149758651	149759971	-	149758651	149785960	A5SS	0.12	50	50	ENSMUST00000122059.8	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149758651	149760369	-	149758651	149785960	A5SS	0.12	50	50	ENSMUST00000122059.8	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149758651	149781506	-	149758651	149785960	A5SS	0.12	50	50	ENSMUST00000122059.8	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149758651	149782913	-	149758651	149785960	A5SS	0.12	50	50	ENSMUST00000122059.8	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149758651	149781506	-	149758651	149760369	5pMXE	0.12	50	50	ENSMUST00000118704.8	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149758651	149782913	-	149758651	149760369	5pMXE	0.12	50	50	ENSMUST00000118704.8	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149758651	149786921	-	149758651	149760369	5pMXE	0.12	50	50	ENSMUST00000118704.8	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149758651	149759594	-	149758651	149760369	A5SS	0.12	50	50	ENSMUST00000118704.8	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149758651	149759971	-	149758651	149760369	A5SS	0.12	50	50	ENSMUST00000118704.8	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149758651	149759594	-	149758651	149781506	A5SS	0.16	50	50	ENSMUST00000105688.10	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149758651	149759971	-	149758651	149781506	A5SS	0.16	50	50	ENSMUST00000105688.10	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149758651	149782913	-	149758651	149781506	A5SS&ES	0.16	50	50	ENSMUST00000105688.10	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149758651	149759971	-	149758651	149759594	5pMXE	0.12	50	50	ENSMUST00000127273.8	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149758651	149782913	-	149758651	149759594	5pMXE	0.12	50	50	ENSMUST00000127273.8	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149758651	149786921	-	149758651	149759594	5pMXE	0.12	50	50	ENSMUST00000127273.8	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149758651	149782913	-	149758651	149759971	5pMXE	0.12	50	50	ENSMUST00000131224.8	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149758651	149786921	-	149758651	149759971	5pMXE	0.12	50	50	ENSMUST00000131224.8	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149758651	149786921	-	149758651	149782913	5pMXE	0.12	50	50	ENSMUST00000134534.8	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149758651	149781506	-	149758651	149786921	A5SS	0.12	50	50	ENSMUST00000156309.2	ENSMUSG00000039936.19	Pik3cd	chr4	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
chr4	149816413	149822007	-	149816413	149822292	A5SS	0.5	50	50	ENSMUST00000105687.9	ENSMUSG00000044700.16	Tmem201	chr4	protein_coding	transmembrane protein 201
chr4	149833067	149833438	+	149833067	149833282	A3SS	0.5	50	50	ENSMUST00000146250.2	ENSMUSG00000085403.2	Gm13068	chr4	lncRNA	predicted gene 13068
chr4	149991714;149994209	149993954;150039310	-	149991714	150039310	cassetteExon	0.5	100	100	ENSMUST00000038562.9	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	149991714	150006739	-	149991714	150039310	A5SS	0.12	50	50	ENSMUST00000038562.9	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	149991714	150015922	-	149991714	150039310	A5SS	0.12	50	50	ENSMUST00000038562.9	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	149991714	150026737	-	149991714	150039310	A5SS	0.12	50	50	ENSMUST00000038562.9	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	149991714	150030324	-	149991714	150039310	A5SS	0.12	50	50	ENSMUST00000038562.9	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	149991714	150038195	-	149991714	150039310	A5SS	0.12	50	50	ENSMUST00000038562.9	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	149991714	150039278	-	149991714	150039310	A5SS	0.12	50	50	ENSMUST00000038562.9	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	149991714	150006739	-	149991714	149993954	5pMXE	0.12	50	50	ENSMUST00000105685.2	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	149991714	150015922	-	149991714	149993954	5pMXE	0.12	50	50	ENSMUST00000105685.2	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	149991714	150026737	-	149991714	149993954	5pMXE	0.12	50	50	ENSMUST00000105685.2	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	149991714	150030324	-	149991714	149993954	5pMXE	0.12	50	50	ENSMUST00000105685.2	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	149991714	150038195	-	149991714	149993954	5pMXE	0.12	50	50	ENSMUST00000105685.2	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	149991714	150039278	-	149991714	149993954	5pMXE	0.12	50	50	ENSMUST00000105685.2	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	149991714	150039310	-	149991714	149993954	5pMXE	0.12	50	50	ENSMUST00000105685.2	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	149991714	150039278	-	149991714	150038195	5pMXE	0.12	50	50	ENSMUST00000156897.2	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	149991714	150006739	-	149991714	150038195	A5SS	0.12	50	50	ENSMUST00000156897.2	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	149991714	150015922	-	149991714	150038195	A5SS	0.12	50	50	ENSMUST00000156897.2	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	149991714	150026737	-	149991714	150038195	A5SS	0.12	50	50	ENSMUST00000156897.2	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	149991714	150030324	-	149991714	150038195	A5SS	0.12	50	50	ENSMUST00000156897.2	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	149991714	150015922	-	149991714	150006739	5pMXE	0.12	50	50	ENSMUST00000167342.2	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	149991714	150026737	-	149991714	150006739	5pMXE	0.12	50	50	ENSMUST00000167342.2	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	149991714	150030324	-	149991714	150006739	5pMXE	0.12	50	50	ENSMUST00000167342.2	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	149991714	150039278	-	149991714	150006739	5pMXE	0.12	50	50	ENSMUST00000167342.2	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	149991714	150026737	-	149991714	150015922	5pMXE	0.12	50	50	ENSMUST00000149360.2	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	149991714	150030324	-	149991714	150015922	5pMXE	0.12	50	50	ENSMUST00000149360.2	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	149991714	150039278	-	149991714	150015922	5pMXE	0.12	50	50	ENSMUST00000149360.2	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	149991714	150030324	-	149991714	150026737	5pMXE	0.12	50	50	ENSMUST00000125135.2	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	149991714	150039278	-	149991714	150026737	5pMXE	0.12	50	50	ENSMUST00000125135.2	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	149991714	150039278	-	149991714	150030324	5pMXE	0.12	50	50	ENSMUST00000149743.2	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	149991714	150039310	-	149994209	150039310	3pMXE	0.5	50	50	ENSMUST00000135896.2	ENSMUSG00000039911.14	Spsb1	chr4	protein_coding	splA/ryanodine receptor domain and SOCS box containing 1
chr4	150080838	150093208	-	150080838	150087489	5pMXE	0.33	50	50	ENSMUST00000084117.13	ENSMUSG00000028980.15	H6pd	chr4	protein_coding	hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)
chr4	150080838	150085607	-	150080838	150087489	A5SS	0.33	50	50	ENSMUST00000084117.13	ENSMUSG00000028980.15	H6pd	chr4	protein_coding	hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)
chr4	150080838	150085607	-	150080838	150093208	A5SS	0.33	50	50	ENSMUST00000030830.4	ENSMUSG00000028980.15	H6pd	chr4	protein_coding	hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)
chr4	150084483	150085607	-	150080838	150085607	A3SS	0.5	50	50	ENSMUST00000153394.2	ENSMUSG00000028980.15	H6pd	chr4	protein_coding	hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)
chr4	150272723	150273578	-	150271965	150273578	A3SS	0.5	50	50	ENSMUST00000105683.9	ENSMUSG00000028972.12	Car6	chr4	protein_coding	carbonic anhydrase 6
chr4	150271965	150273546	-	150271965	150273578	A5SS	0.5	50	50	ENSMUST00000105683.9	ENSMUSG00000028972.12	Car6	chr4	protein_coding	carbonic anhydrase 6
chr4	150325597;150326282	150326224;150328462	+	150325597;150326637	150326579;150328462	MXE	0.5	100	100	ENSMUST00000150175.8	ENSMUSG00000063524.14	Eno1	chr4	protein_coding	enolase 1, alpha non-neuron
chr4	150321797	150323930	+	150321328	150323930	A5SS	0.33	50	50	ENSMUST00000150175.8	ENSMUSG00000063524.14	Eno1	chr4	protein_coding	enolase 1, alpha non-neuron
chr4	150322290	150323930	+	150321328	150323930	A5SS	0.33	50	50	ENSMUST00000150175.8	ENSMUSG00000063524.14	Eno1	chr4	protein_coding	enolase 1, alpha non-neuron
chr4	150322290	150323930	+	150321797	150323930	A5SS	0.33	50	50	ENSMUST00000080926.13	ENSMUSG00000063524.14	Eno1	chr4	protein_coding	enolase 1, alpha non-neuron
chr4	150325597	150326224	+	150325597	150326579	A3SS	0.5	50	50	ENSMUST00000141931.2	ENSMUSG00000063524.14	Eno1	chr4	protein_coding	enolase 1, alpha non-neuron
chr4	150516050	150553152	+	150516050;150523925	150523800;150553152	ES	0.5	50	50	ENSMUST00000105682.9	ENSMUSG00000039852.18	Rere	chr4	protein_coding	arginine glutamic acid dipeptide (RE) repeats
chr4	150654753;150660745	150660607;150695311	+	150654753	150695311	cassetteExon	0.5	100	100	ENSMUST00000105682.9	ENSMUSG00000039852.18	Rere	chr4	protein_coding	arginine glutamic acid dipeptide (RE) repeats
chr4	150366532	150366771	+	150366532	150490653	A3SS	0.5	50	50	ENSMUST00000105682.9	ENSMUSG00000039852.18	Rere	chr4	protein_coding	arginine glutamic acid dipeptide (RE) repeats
chr4	150700620	150701213	+	150700620	150701216	A3SS	0.5	50	50	ENSMUST00000105682.9	ENSMUSG00000039852.18	Rere	chr4	protein_coding	arginine glutamic acid dipeptide (RE) repeats
chr4	150703009	150703458	+	150703009	150703482	A3SS	0.5	50	50	ENSMUST00000105682.9	ENSMUSG00000039852.18	Rere	chr4	protein_coding	arginine glutamic acid dipeptide (RE) repeats
chr4	150573032	150584460	+	150561925	150584460	A5SS	0.5	50	50	ENSMUST00000105682.9	ENSMUSG00000039852.18	Rere	chr4	protein_coding	arginine glutamic acid dipeptide (RE) repeats
chr4	150654143	150654673	+	150619402	150654673	A5SS	0.5	50	50	ENSMUST00000105682.9	ENSMUSG00000039852.18	Rere	chr4	protein_coding	arginine glutamic acid dipeptide (RE) repeats
chr4	150727838	150728268	-	150727838	150728405	A5SS	0.5	50	50	ENSMUST00000037827.10	ENSMUSG00000039838.12	Slc45a1	chr4	protein_coding	solute carrier family 45, member 1
chr4	150939728	150949532	+	150938562	150949532	A5SS	0.5	50	50	ENSMUST00000073600.9	ENSMUSG00000028967.11	Errfi1	chr4	protein_coding	ERBB receptor feedback inhibitor 1
chr4	150939728	150949532	+	150939728	150939925	3pMXE	0.5	50	50	ENSMUST00000128640.8	ENSMUSG00000028967.11	Errfi1	chr4	protein_coding	ERBB receptor feedback inhibitor 1
chr4	150992880	150998348	-	150992880	150994240	5pMXE	0.2	50	50	ENSMUST00000030805.14	ENSMUSG00000028964.15	Park7	chr4	protein_coding	Parkinson disease (autosomal recessive, early onset) 7
chr4	150992880	150998777	-	150992880	150994240	5pMXE	0.2	50	50	ENSMUST00000030805.14	ENSMUSG00000028964.15	Park7	chr4	protein_coding	Parkinson disease (autosomal recessive, early onset) 7
chr4	150985551	150985996	-	150985551	150988272	A5SS	0.5	50	50	ENSMUST00000030805.14	ENSMUSG00000028964.15	Park7	chr4	protein_coding	Parkinson disease (autosomal recessive, early onset) 7
chr4	150992880	150993649	-	150992880	150994240	A5SS	0.2	50	50	ENSMUST00000030805.14	ENSMUSG00000028964.15	Park7	chr4	protein_coding	Parkinson disease (autosomal recessive, early onset) 7
chr4	150992880	150993848	-	150992880	150994240	A5SS	0.2	50	50	ENSMUST00000030805.14	ENSMUSG00000028964.15	Park7	chr4	protein_coding	Parkinson disease (autosomal recessive, early onset) 7
chr4	150992880	150993649	-	150992880	150998777	A5SS	0.2	50	50	ENSMUST00000105675.8	ENSMUSG00000028964.15	Park7	chr4	protein_coding	Parkinson disease (autosomal recessive, early onset) 7
chr4	150992880	150993848	-	150992880	150998777	A5SS	0.2	50	50	ENSMUST00000105675.8	ENSMUSG00000028964.15	Park7	chr4	protein_coding	Parkinson disease (autosomal recessive, early onset) 7
chr4	150992880	150998348	-	150992880	150998777	A5SS	0.2	50	50	ENSMUST00000105675.8	ENSMUSG00000028964.15	Park7	chr4	protein_coding	Parkinson disease (autosomal recessive, early onset) 7
chr4	150992880	150993649	-	150992880	150993848	A5SS	0.5	50	50	ENSMUST00000105674.8	ENSMUSG00000028964.15	Park7	chr4	protein_coding	Parkinson disease (autosomal recessive, early onset) 7
chr4	150992880	150998348	-	150992880	150993848	5pMXE	0.2	50	50	ENSMUST00000105673.8	ENSMUSG00000028964.15	Park7	chr4	protein_coding	Parkinson disease (autosomal recessive, early onset) 7
chr4	150992880	150998348	-	150992880	150993649	5pMXE	0.2	50	50	ENSMUST00000128075.8	ENSMUSG00000028964.15	Park7	chr4	protein_coding	Parkinson disease (autosomal recessive, early onset) 7
chr4	151004717	151014278	+	150999170	151014278	A5SS	0.25	50	50	ENSMUST00000135169.8	ENSMUSG00000028965.14	Tnfrsf9	chr4	protein_coding	tumor necrosis factor receptor superfamily, member 9
chr4	151009882	151014278	+	150999170	151014278	A5SS	0.25	50	50	ENSMUST00000135169.8	ENSMUSG00000028965.14	Tnfrsf9	chr4	protein_coding	tumor necrosis factor receptor superfamily, member 9
chr4	151012542	151014278	+	150999170	151014278	A5SS	0.25	50	50	ENSMUST00000135169.8	ENSMUSG00000028965.14	Tnfrsf9	chr4	protein_coding	tumor necrosis factor receptor superfamily, member 9
chr4	151018868;151020013	151019879;151029230	+	151018868	151029230	cassetteExon	0.5	100	100	ENSMUST00000105672.10	ENSMUSG00000028965.14	Tnfrsf9	chr4	protein_coding	tumor necrosis factor receptor superfamily, member 9
chr4	151009882	151014278	+	151004717	151014278	A5SS	0.25	50	50	ENSMUST00000105672.10	ENSMUSG00000028965.14	Tnfrsf9	chr4	protein_coding	tumor necrosis factor receptor superfamily, member 9
chr4	151012542	151014278	+	151004717	151014278	A5SS	0.25	50	50	ENSMUST00000105672.10	ENSMUSG00000028965.14	Tnfrsf9	chr4	protein_coding	tumor necrosis factor receptor superfamily, member 9
chr4	151012542	151014278	+	151009882	151014278	A5SS	0.25	50	50	ENSMUST00000105671.8	ENSMUSG00000028965.14	Tnfrsf9	chr4	protein_coding	tumor necrosis factor receptor superfamily, member 9
chr4	151012542	151014152	+	151012542	151014278	A3SS	0.5	50	50	ENSMUST00000139826.8	ENSMUSG00000028965.14	Tnfrsf9	chr4	protein_coding	tumor necrosis factor receptor superfamily, member 9
chr4	151018868	151029230	+	151018868	151019879	3pMXE	0.5	50	50	ENSMUST00000126707.3	ENSMUSG00000028965.14	Tnfrsf9	chr4	protein_coding	tumor necrosis factor receptor superfamily, member 9
chr4	151147312	151158445	-	151147312;151155913	151155883;151158445	ES	0.5	50	50	ENSMUST00000169423.9	ENSMUSG00000014592.22	Camta1	chr4	protein_coding	calmodulin binding transcription activator 1
chr4	151159742	151162321	-	151159742;151161054	151161034;151162321	ES	0.5	50	50	ENSMUST00000169423.9	ENSMUSG00000014592.22	Camta1	chr4	protein_coding	calmodulin binding transcription activator 1
chr4	151914993	151946082	-	151914993;151920340	151920271;151946082	ES	0.5	50	50	ENSMUST00000169423.9	ENSMUSG00000014592.22	Camta1	chr4	protein_coding	calmodulin binding transcription activator 1
chr4	151163442	151164144	-	151163484	151164144	A3SS	0.5	50	50	ENSMUST00000169423.9	ENSMUSG00000014592.22	Camta1	chr4	protein_coding	calmodulin binding transcription activator 1
chr4	151168318	151169020	-	151168657	151169020	A3SS	0.5	50	50	ENSMUST00000169423.9	ENSMUSG00000014592.22	Camta1	chr4	protein_coding	calmodulin binding transcription activator 1
chr4	151556765	151670872	-	151537876	151670872	A3SS	0.5	50	50	ENSMUST00000169423.9	ENSMUSG00000014592.22	Camta1	chr4	protein_coding	calmodulin binding transcription activator 1
chr4	151724247	151914875	-	151670939	151914875	A3SS	0.33	50	50	ENSMUST00000169423.9	ENSMUSG00000014592.22	Camta1	chr4	protein_coding	calmodulin binding transcription activator 1
chr4	151876959	151914875	-	151670939	151914875	A3SS	0.33	50	50	ENSMUST00000169423.9	ENSMUSG00000014592.22	Camta1	chr4	protein_coding	calmodulin binding transcription activator 1
chr4	151173438	151192628	-	151173438	151215999	A5SS	0.25	50	50	ENSMUST00000169423.9	ENSMUSG00000014592.22	Camta1	chr4	protein_coding	calmodulin binding transcription activator 1
chr4	151173438	151192820	-	151173438	151215999	A5SS	0.25	50	50	ENSMUST00000169423.9	ENSMUSG00000014592.22	Camta1	chr4	protein_coding	calmodulin binding transcription activator 1
chr4	151173438	151213790	-	151173438	151215999	A5SS	0.25	50	50	ENSMUST00000169423.9	ENSMUSG00000014592.22	Camta1	chr4	protein_coding	calmodulin binding transcription activator 1
chr4	151222897	151223903	-	151222897	151228173	A5SS	0.5	50	50	ENSMUST00000169423.9	ENSMUSG00000014592.22	Camta1	chr4	protein_coding	calmodulin binding transcription activator 1
chr4	151670939	151723515	-	151670939	151914875	A5SS	0.5	50	50	ENSMUST00000169423.9	ENSMUSG00000014592.22	Camta1	chr4	protein_coding	calmodulin binding transcription activator 1
chr4	151173438	151213790	-	151173438	151192820	5pMXE	0.25	50	50	ENSMUST00000105670.8	ENSMUSG00000014592.22	Camta1	chr4	protein_coding	calmodulin binding transcription activator 1
chr4	151173438	151192628	-	151173438	151192820	A5SS	0.25	50	50	ENSMUST00000105670.8	ENSMUSG00000014592.22	Camta1	chr4	protein_coding	calmodulin binding transcription activator 1
chr4	151173438	151192628	-	151173438	151213790	A5SS	0.25	50	50	ENSMUST00000105668.8	ENSMUSG00000014592.22	Camta1	chr4	protein_coding	calmodulin binding transcription activator 1
chr4	151876959	151914875	-	151724247	151914875	A3SS	0.33	50	50	ENSMUST00000155685.8	ENSMUSG00000014592.22	Camta1	chr4	protein_coding	calmodulin binding transcription activator 1
chr4	151102523	151103309	-	151102523;151102790	151102675;151103309	ES	0.5	50	50	ENSMUST00000103204.11	ENSMUSG00000028957.13	Per3	chr4	protein_coding	period circadian clock 3
chr4	151110675;151111861	151111669;151113206	-	151110675	151113206	cassetteExon	0.5	100	100	ENSMUST00000103204.11	ENSMUSG00000028957.13	Per3	chr4	protein_coding	period circadian clock 3
chr4	151097386	151097999	-	151097389	151097999	A3SS	0.5	50	50	ENSMUST00000103204.11	ENSMUSG00000028957.13	Per3	chr4	protein_coding	period circadian clock 3
chr4	151098226	151100466	-	151098226	151102356	A5SS	0.5	50	50	ENSMUST00000103204.11	ENSMUSG00000028957.13	Per3	chr4	protein_coding	period circadian clock 3
chr4	152053084	152055314	+	152053084;152054425	152054303;152055314	ES	0.5	50	50	ENSMUST00000062904.11	ENSMUSG00000039768.17	Dnajc11	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C11
chr4	152058770	152062456	+	152058770;152061562	152061407;152062456	ES	0.5	50	50	ENSMUST00000062904.11	ENSMUSG00000039768.17	Dnajc11	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C11
chr4	152055387	152055678	+	152055387	152057937	A3SS	0.5	50	50	ENSMUST00000062904.11	ENSMUSG00000039768.17	Dnajc11	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C11
chr4	152030959	152034851	+	152018281	152034851	A5SS	0.5	50	50	ENSMUST00000062904.11	ENSMUSG00000039768.17	Dnajc11	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C11
chr4	152052427	152052956	+	152041661	152052956	A5SS	0.5	50	50	ENSMUST00000062904.11	ENSMUSG00000039768.17	Dnajc11	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C11
chr4	152062807	152063729	+	152062525	152063729	A5SS	0.5	50	50	ENSMUST00000062904.11	ENSMUSG00000039768.17	Dnajc11	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C11
chr4	152053084	152055314	+	152054425	152055314	5pMXE	0.5	50	50	ENSMUST00000148048.2	ENSMUSG00000039768.17	Dnajc11	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C11
chr4	152058770	152062456	+	152058770	152061407	3pMXE	0.5	50	50	ENSMUST00000148048.2	ENSMUSG00000039768.17	Dnajc11	chr4	protein_coding	DnaJ heat shock protein family (Hsp40) member C11
chr4	152067809	152070126	-	152067809;152068193	152068092;152070126	ES	0.5	50	50	ENSMUST00000036680.8	ENSMUSG00000039759.11	Thap3	chr4	protein_coding	THAP domain containing, apoptosis associated protein 3
chr4	152105165	152105236	-	152105161	152105236	A3SS	0.5	50	50	ENSMUST00000155389.8	ENSMUSG00000028952.13	Zbtb48	chr4	protein_coding	zinc finger and BTB domain containing 48
chr4	152106691	152107153	-	152106576	152107153	A3SS	0.5	50	50	ENSMUST00000155389.8	ENSMUSG00000028952.13	Zbtb48	chr4	protein_coding	zinc finger and BTB domain containing 48
chr4	152111516	152112022	-	152111516	152112000	A5SS	0.5	50	50	ENSMUST00000155389.8	ENSMUSG00000028952.13	Zbtb48	chr4	protein_coding	zinc finger and BTB domain containing 48
chr4	152130287	152131004	+	152130287;152130492	152130405;152131004	ES	0.5	50	50	ENSMUST00000084116.13	ENSMUSG00000028948.17	Nol9	chr4	protein_coding	nucleolar protein 9
chr4	152142381	152145710	+	152142381	152142798	3pMXE	0.5	50	50	ENSMUST00000084116.13	ENSMUSG00000028948.17	Nol9	chr4	protein_coding	nucleolar protein 9
chr4	152160972	152172102	+	152157157	152172102	A5SS	0.33	50	50	ENSMUST00000105662.8	ENSMUSG00000039713.18	Plekhg5	chr4	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 5
chr4	152171402	152172102	+	152157157	152172102	A5SS	0.33	50	50	ENSMUST00000105662.8	ENSMUSG00000039713.18	Plekhg5	chr4	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 5
chr4	152181364	152186501	+	152172178	152186501	A5SS	0.5	50	50	ENSMUST00000105662.8	ENSMUSG00000039713.18	Plekhg5	chr4	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 5
chr4	152160972	152172102	+	152160972	152163260	3pMXE	0.5	50	50	ENSMUST00000239128.2	ENSMUSG00000039713.18	Plekhg5	chr4	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 5
chr4	152171402	152172102	+	152160972	152172102	A5SS	0.33	50	50	ENSMUST00000239025.2	ENSMUSG00000039713.18	Plekhg5	chr4	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 5
chr4	152201145	152201388	+	152201180	152201388	A5SS	0.5	50	50	ENSMUST00000025706.10	ENSMUSG00000024793.15	Tnfrsf25	chr4	protein_coding	tumor necrosis factor receptor superfamily, member 25
chr4	152201999	152202097	+	152201999	152202858	A3SS	0.5	50	50	ENSMUST00000035275.8	ENSMUSG00000024793.15	Tnfrsf25	chr4	protein_coding	tumor necrosis factor receptor superfamily, member 25
chr4	152202759	152202858	+	152201999	152202858	A5SS	0.5	50	50	ENSMUST00000035275.8	ENSMUSG00000024793.15	Tnfrsf25	chr4	protein_coding	tumor necrosis factor receptor superfamily, member 25
chr4	152213010	152215226	-	152213010;152214095	152214069;152215226	ES	0.5	50	50	ENSMUST00000030785.15	ENSMUSG00000028943.19	Espn	chr4	protein_coding	espin
chr4	152215751	152218618	-	152215751;152217413	152217381;152218618	ES	0.33	50	50	ENSMUST00000030785.15	ENSMUSG00000028943.19	Espn	chr4	protein_coding	espin
chr4	152208247	152212526	-	152208250	152212526	A3SS	0.33	50	50	ENSMUST00000030785.15	ENSMUSG00000028943.19	Espn	chr4	protein_coding	espin
chr4	152211028	152212526	-	152208250	152212526	A3SS	0.33	50	50	ENSMUST00000030785.15	ENSMUSG00000028943.19	Espn	chr4	protein_coding	espin
chr4	152218889	152219930	-	152218898	152219930	A3SS	0.5	50	50	ENSMUST00000030785.15	ENSMUSG00000028943.19	Espn	chr4	protein_coding	espin
chr4	152213010	152213227	-	152213010	152214069	A5SS	0.33	50	50	ENSMUST00000030785.15	ENSMUSG00000028943.19	Espn	chr4	protein_coding	espin
chr4	152215418	152216246	-	152215418	152215509	A5SS&ES	0.33	50	50	ENSMUST00000030785.15	ENSMUSG00000028943.19	Espn	chr4	protein_coding	espin
chr4	152215751	152216246	-	152215751	152217381	A5SS	0.33	50	50	ENSMUST00000030785.15	ENSMUSG00000028943.19	Espn	chr4	protein_coding	espin
chr4	152220131	152220731	-	152220131	152222887	A5SS	0.5	50	50	ENSMUST00000030785.15	ENSMUSG00000028943.19	Espn	chr4	protein_coding	espin
chr4	152215418	152218618	-	152215751	152218618	A3SS	0.33	50	50	ENSMUST00000105659.9	ENSMUSG00000028943.19	Espn	chr4	protein_coding	espin
chr4	152213010	152213227	-	152213010	152215226	A5SS	0.33	50	50	ENSMUST00000105659.9	ENSMUSG00000028943.19	Espn	chr4	protein_coding	espin
chr4	152215751	152216246	-	152215751	152218618	A5SS	0.33	50	50	ENSMUST00000105659.9	ENSMUSG00000028943.19	Espn	chr4	protein_coding	espin
chr4	152215418	152218618	-	152215418;152215751	152215509;152218618	ES	0.33	50	50	ENSMUST00000105658.8	ENSMUSG00000028943.19	Espn	chr4	protein_coding	espin
chr4	152215418	152216246	-	152215418;152215751	152215509;152216246	ES	0.5	50	50	ENSMUST00000105653.8	ENSMUSG00000028943.19	Espn	chr4	protein_coding	espin
chr4	152215418	152218618	-	152215418	152215509	5pMXE	0.33	50	50	ENSMUST00000150958.8	ENSMUSG00000028943.19	Espn	chr4	protein_coding	espin
chr4	152217413	152218618	-	152215418	152218618	A3SS	0.33	50	50	ENSMUST00000105655.8	ENSMUSG00000028943.19	Espn	chr4	protein_coding	espin
chr4	152215418	152216246	-	152215418	152218618	A5SS	0.33	50	50	ENSMUST00000105655.8	ENSMUSG00000028943.19	Espn	chr4	protein_coding	espin
chr4	152211028	152212526	-	152208247	152212526	A3SS	0.33	50	50	ENSMUST00000135185.2	ENSMUSG00000028943.19	Espn	chr4	protein_coding	espin
chr4	152270353	152291221	+	152262797	152291221	A5SS	0.2	50	50	ENSMUST00000075363.10	ENSMUSG00000028937.15	Acot7	chr4	protein_coding	acyl-CoA thioesterase 7
chr4	152270842	152291221	+	152262797	152291221	A5SS	0.2	50	50	ENSMUST00000075363.10	ENSMUSG00000028937.15	Acot7	chr4	protein_coding	acyl-CoA thioesterase 7
chr4	152284414	152291221	+	152262797	152291221	A5SS	0.2	50	50	ENSMUST00000075363.10	ENSMUSG00000028937.15	Acot7	chr4	protein_coding	acyl-CoA thioesterase 7
chr4	152284546	152291221	+	152262797	152291221	A5SS	0.2	50	50	ENSMUST00000075363.10	ENSMUSG00000028937.15	Acot7	chr4	protein_coding	acyl-CoA thioesterase 7
chr4	152270842	152291221	+	152270353	152291221	A5SS	0.2	50	50	ENSMUST00000124548.8	ENSMUSG00000028937.15	Acot7	chr4	protein_coding	acyl-CoA thioesterase 7
chr4	152284414	152291221	+	152270353	152291221	A5SS	0.2	50	50	ENSMUST00000124548.8	ENSMUSG00000028937.15	Acot7	chr4	protein_coding	acyl-CoA thioesterase 7
chr4	152284546	152291221	+	152270353	152291221	A5SS	0.2	50	50	ENSMUST00000124548.8	ENSMUSG00000028937.15	Acot7	chr4	protein_coding	acyl-CoA thioesterase 7
chr4	152284414	152291221	+	152270842	152291221	A5SS	0.2	50	50	ENSMUST00000167926.8	ENSMUSG00000028937.15	Acot7	chr4	protein_coding	acyl-CoA thioesterase 7
chr4	152284546	152291221	+	152270842	152291221	A5SS	0.2	50	50	ENSMUST00000167926.8	ENSMUSG00000028937.15	Acot7	chr4	protein_coding	acyl-CoA thioesterase 7
chr4	152284546	152291221	+	152284414	152291221	A5SS	0.2	50	50	ENSMUST00000105652.3	ENSMUSG00000028937.15	Acot7	chr4	protein_coding	acyl-CoA thioesterase 7
chr4	152367012	152367315	+	152367012	152367384	A3SS	0.5	50	50	ENSMUST00000105650.8	ENSMUSG00000042804.14	Gpr153	chr4	protein_coding	G protein-coupled receptor 153
chr4	152372337;152372588	152372458;152372775	-	152372337	152372775	cassetteExon	0.5	100	100	ENSMUST00000094438.2	ENSMUSG00000028946.8	Hes3	chr4	protein_coding	hes family bHLH transcription factor 3
chr4	152383230;152383702	152383594;152384128	+	152383230	152384128	cassetteExon	0.5	100	100	ENSMUST00000048892.14	ENSMUSG00000039662.17	Icmt	chr4	protein_coding	isoprenylcysteine carboxyl methyltransferase
chr4	152382371	152383142	+	152382025	152383142	A5SS	0.5	50	50	ENSMUST00000048892.14	ENSMUSG00000039662.17	Icmt	chr4	protein_coding	isoprenylcysteine carboxyl methyltransferase
chr4	152398404	152399499	-	152398404;152398565	152398493;152399499	ES	0.33	50	50	ENSMUST00000076183.12	ENSMUSG00000058498.13	Rnf207	chr4	protein_coding	ring finger protein 207
chr4	152400520;152400996	152400805;152402118	-	152400520	152402118	cassetteExon	0.5	100	100	ENSMUST00000076183.12	ENSMUSG00000058498.13	Rnf207	chr4	protein_coding	ring finger protein 207
chr4	152392068	152393295	-	152392073	152393295	A3SS	0.5	50	50	ENSMUST00000076183.12	ENSMUSG00000058498.13	Rnf207	chr4	protein_coding	ring finger protein 207
chr4	152398372	152398493	-	152398404	152398493	A3SS	0.5	50	50	ENSMUST00000076183.12	ENSMUSG00000058498.13	Rnf207	chr4	protein_coding	ring finger protein 207
chr4	152398372	152399499	-	152398565	152399499	A3SS&ES	0.33	50	50	ENSMUST00000076183.12	ENSMUSG00000058498.13	Rnf207	chr4	protein_coding	ring finger protein 207
chr4	152402328	152402725	-	152402250	152402725	A3SS	0.5	50	50	ENSMUST00000076183.12	ENSMUSG00000058498.13	Rnf207	chr4	protein_coding	ring finger protein 207
chr4	152398372;152398565	152398493;152399499	-	152398372	152399499	cassetteExon	0.5	100	100	ENSMUST00000170820.3	ENSMUSG00000058498.13	Rnf207	chr4	protein_coding	ring finger protein 207
chr4	152398404	152399499	-	152398372	152399499	A3SS	0.33	50	50	ENSMUST00000170820.3	ENSMUSG00000058498.13	Rnf207	chr4	protein_coding	ring finger protein 207
chr4	152398404	152399499	-	152398565	152399499	A3SS&ES	0.33	50	50	ENSMUST00000143968.8	ENSMUSG00000058498.13	Rnf207	chr4	protein_coding	ring finger protein 207
chr4	152412042	152413717	+	152412042	152414461	A3SS	0.5	50	50	ENSMUST00000142735.8	ENSMUSG00000028936.16	Rpl22	chr4	protein_coding	ribosomal protein L22
chr4	152414585	152416717	+	152414585	152416737	A3SS	0.5	50	50	ENSMUST00000142735.8	ENSMUSG00000028936.16	Rpl22	chr4	protein_coding	ribosomal protein L22
chr4	152411816	152411938	+	152410352	152411938	A5SS	0.5	50	50	ENSMUST00000142735.8	ENSMUSG00000028936.16	Rpl22	chr4	protein_coding	ribosomal protein L22
chr4	152460824	152461426	+	152460824;152461147	152461037;152461426	ES	0.5	50	50	ENSMUST00000030775.12	ENSMUSG00000005045.17	Chd5	chr4	protein_coding	chromodomain helicase DNA binding protein 5
chr4	152470053	152470406	+	152470053;152470295	152470181;152470406	ES	0.5	50	50	ENSMUST00000030775.12	ENSMUSG00000005045.17	Chd5	chr4	protein_coding	chromodomain helicase DNA binding protein 5
chr4	152426117	152432393	+	152423487	152432393	A5SS	0.5	50	50	ENSMUST00000030775.12	ENSMUSG00000005045.17	Chd5	chr4	protein_coding	chromodomain helicase DNA binding protein 5
chr4	152520394	152539291	-	152520394	152533135	5pMXE	0.25	50	50	ENSMUST00000159840.8	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152520394	152558180	-	152520394	152533135	5pMXE	0.25	50	50	ENSMUST00000159840.8	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152520394	152561858	-	152520394	152533135	5pMXE	0.25	50	50	ENSMUST00000159840.8	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152481298;152484722	152484678;152485405	-	152481298	152485405	cassetteExon	0.5	100	100	ENSMUST00000159840.8	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152497317;152519280	152519239;152520262	-	152497317	152520262	cassetteExon	0.5	100	100	ENSMUST00000159840.8	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152497317	152502472	-	152497317	152520262	A5SS	0.14	50	50	ENSMUST00000159840.8	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152497317	152507167	-	152497317	152520262	A5SS	0.14	50	50	ENSMUST00000159840.8	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152497317	152510062	-	152497317	152520262	A5SS	0.14	50	50	ENSMUST00000159840.8	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152497317	152514885	-	152497317	152520262	A5SS	0.14	50	50	ENSMUST00000159840.8	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152497317	152515072	-	152497317	152520262	A5SS	0.14	50	50	ENSMUST00000159840.8	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152497317;152510299	152510062;152519239	-	152497317	152519239	cassetteExon	0.5	100	100	ENSMUST00000160884.9	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152520394;152558318	152558180;152561858	-	152520394	152561858	cassetteExon	0.5	100	100	ENSMUST00000160884.9	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152511123	152519239	-	152497317	152519239	A3SS	0.33	50	50	ENSMUST00000160884.9	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152497317	152502472	-	152497317	152519239	A5SS	0.14	50	50	ENSMUST00000160884.9	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152497317	152507167	-	152497317	152519239	A5SS	0.14	50	50	ENSMUST00000160884.9	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152497317	152514885	-	152497317	152519239	A5SS	0.14	50	50	ENSMUST00000160884.9	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152497317	152515072	-	152497317	152519239	A5SS	0.14	50	50	ENSMUST00000160884.9	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152520394	152539291	-	152520394	152561858	A5SS	0.25	50	50	ENSMUST00000160884.9	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152497317	152515072	-	152497317;152510299	152510062;152515072	ES	0.5	50	50	ENSMUST00000238715.2	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152510299	152519239	-	152510299	152515072	5pMXE	0.5	50	50	ENSMUST00000238715.2	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152497317	152502472	-	152497317	152510062	A5SS	0.2	50	50	ENSMUST00000238715.2	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152497317	152507167	-	152497317	152510062	A5SS	0.2	50	50	ENSMUST00000238715.2	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152497317	152514885	-	152497317	152510062	A5SS&ES	0.2	50	50	ENSMUST00000238715.2	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152497317	152507167	-	152497317	152502472	5pMXE	0.14	50	50	ENSMUST00000238252.2	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152497317	152514885	-	152497317	152502472	5pMXE	0.14	50	50	ENSMUST00000238252.2	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152497317	152515072	-	152497317	152502472	5pMXE	0.14	50	50	ENSMUST00000238252.2	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152497317	152507167	-	152497317	152515072	A5SS	0.14	50	50	ENSMUST00000159186.9	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152497317	152514885	-	152497317	152515072	A5SS	0.14	50	50	ENSMUST00000159186.9	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152497317	152514885	-	152497317	152507167	5pMXE	0.14	50	50	ENSMUST00000159844.9	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152520394	152558180	-	152520394	152539291	5pMXE	0.25	50	50	ENSMUST00000161236.8	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152497317	152520262	-	152491663	152520262	A3SS	0.33	50	50	ENSMUST00000159435.8	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152519280	152520262	-	152491663	152520262	A3SS	0.33	50	50	ENSMUST00000159435.8	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152491663	152496442	-	152491663	152520262	A5SS	0.5	50	50	ENSMUST00000159435.8	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152511123	152519239	-	152510299	152519239	A3SS	0.33	50	50	ENSMUST00000162165.3	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152497317	152515072	-	152497317	152510062	A5SS&ES	0.14	50	50	ENSMUST00000162165.3	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152503131	152505634	-	152503131;152504396	152504242;152505634	ES	0.5	50	50	ENSMUST00000161844.3	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152497317	152520262	-	152519280	152520262	3pMXE	0.33	50	50	ENSMUST00000162017.3	ENSMUSG00000028931.13	Kcnab2	chr4	protein_coding	potassium voltage-gated channel, shaker-related subfamily, beta member 2
chr4	152587461;152587720	152587642;152590818	+	152587461	152590818	cassetteExon	0.5	100	100	ENSMUST00000142027.8	ENSMUSG00000039577.18	Nphp4	chr4	protein_coding	nephronophthisis 4 (juvenile) homolog (human)
chr4	152573351	152573540	+	152573351	152581106	A3SS	0.5	50	50	ENSMUST00000142027.8	ENSMUSG00000039577.18	Nphp4	chr4	protein_coding	nephronophthisis 4 (juvenile) homolog (human)
chr4	152568997	152573199	+	152561214	152573199	A5SS	0.33	50	50	ENSMUST00000142027.8	ENSMUSG00000039577.18	Nphp4	chr4	protein_coding	nephronophthisis 4 (juvenile) homolog (human)
chr4	152573015	152573199	+	152561214	152573199	A5SS	0.33	50	50	ENSMUST00000142027.8	ENSMUSG00000039577.18	Nphp4	chr4	protein_coding	nephronophthisis 4 (juvenile) homolog (human)
chr4	152573015	152573199	+	152568997	152573199	A5SS	0.5	50	50	ENSMUST00000081393.10	ENSMUSG00000039577.18	Nphp4	chr4	protein_coding	nephronophthisis 4 (juvenile) homolog (human)
chr4	152628915	152631403	+	152628916	152631403	A5SS	0.5	50	50	ENSMUST00000081393.10	ENSMUSG00000039577.18	Nphp4	chr4	protein_coding	nephronophthisis 4 (juvenile) homolog (human)
chr4	153470970	153566586	-	153470970;153517310	153516505;153566586	ES	0.5	50	50	ENSMUST00000105646.3	ENSMUSG00000039546.10	Ajap1	chr4	protein_coding	adherens junction associated protein 1
chr4	153517310	153566586	-	153470970	153566586	A3SS	0.5	50	50	ENSMUST00000149177.2	ENSMUSG00000039546.10	Ajap1	chr4	protein_coding	adherens junction associated protein 1
chr4	153470970	153516505	-	153470970	153566586	A5SS	0.5	50	50	ENSMUST00000149177.2	ENSMUSG00000039546.10	Ajap1	chr4	protein_coding	adherens junction associated protein 1
chr4	154041779;154044319	154044206;154044988	+	154041779	154044988	cassetteExon	0.5	100	100	ENSMUST00000105645.9	ENSMUSG00000047613.11	A430005L14Rik	chr4	protein_coding	RIKEN cDNA A430005L14 gene
chr4	154041779;154044319	154044213;154044988	+	154041779	154044988	cassetteExon	0.5	100	100	ENSMUST00000105645.9	ENSMUSG00000047613.11	A430005L14Rik	chr4	protein_coding	RIKEN cDNA A430005L14 gene
chr4	154041779	154044213	+	154041779	154044206	A3SS	0.33	50	50	ENSMUST00000058393.9	ENSMUSG00000047613.11	A430005L14Rik	chr4	protein_coding	RIKEN cDNA A430005L14 gene
chr4	154041779	154044988	+	154041779	154044206	3pMXE	0.33	50	50	ENSMUST00000139967.2	ENSMUSG00000047613.11	A430005L14Rik	chr4	protein_coding	RIKEN cDNA A430005L14 gene
chr4	154041938	154044213	+	154041779	154044213	A5SS	0.5	50	50	ENSMUST00000147826.2	ENSMUSG00000047613.11	A430005L14Rik	chr4	protein_coding	RIKEN cDNA A430005L14 gene
chr4	154041779	154044988	+	154044319	154044988	5pMXE	0.5	50	50	ENSMUST00000128457.2	ENSMUSG00000047613.11	A430005L14Rik	chr4	protein_coding	RIKEN cDNA A430005L14 gene
chr4	154056117;154057135	154057065;154057237	-	154056117	154057237	cassetteExon	0.5	100	100	ENSMUST00000030893.3	ENSMUSG00000029027.10	Dffb	chr4	protein_coding	DNA fragmentation factor, beta subunit
chr4	154056117	154056343	-	154056117	154057237	A5SS	0.33	50	50	ENSMUST00000030893.3	ENSMUSG00000029027.10	Dffb	chr4	protein_coding	DNA fragmentation factor, beta subunit
chr4	154056117	154056343	-	154056117	154057065	A5SS	0.33	50	50	ENSMUST00000133607.9	ENSMUSG00000029027.10	Dffb	chr4	protein_coding	DNA fragmentation factor, beta subunit
chr4	154056117	154057237	-	154057135	154057237	3pMXE	0.5	50	50	ENSMUST00000142671.2	ENSMUSG00000029027.10	Dffb	chr4	protein_coding	DNA fragmentation factor, beta subunit
chr4	154104342	154104894	+	154104270	154104894	A5SS	0.5	50	50	ENSMUST00000167947.2	ENSMUSG00000029028.15	Lrrc47	chr4	protein_coding	leucine rich repeat containing 47
chr4	154108348;154108650	154108524;154109961	-	154108348	154109961	cassetteExon	0.5	100	100	ENSMUST00000182191.8	ENSMUSG00000078350.12	Smim1	chr4	protein_coding	small integral membrane protein 1
chr4	154108348;154108807	154108524;154109961	-	154108348	154109961	cassetteExon	0.5	100	100	ENSMUST00000182191.8	ENSMUSG00000078350.12	Smim1	chr4	protein_coding	small integral membrane protein 1
chr4	154108274	154109961	-	154108348	154109961	A3SS	0.2	50	50	ENSMUST00000182191.8	ENSMUSG00000078350.12	Smim1	chr4	protein_coding	small integral membrane protein 1
chr4	154108344	154109961	-	154108348	154109961	A3SS	0.2	50	50	ENSMUST00000182191.8	ENSMUSG00000078350.12	Smim1	chr4	protein_coding	small integral membrane protein 1
chr4	154107910	154108051	-	154107910	154108145	A5SS	0.5	50	50	ENSMUST00000182151.8	ENSMUSG00000078350.12	Smim1	chr4	protein_coding	small integral membrane protein 1
chr4	154108274	154108524	-	154108348	154108524	A3SS	0.33	50	50	ENSMUST00000143047.8	ENSMUSG00000078350.12	Smim1	chr4	protein_coding	small integral membrane protein 1
chr4	154108274	154109961	-	154108650	154109961	A3SS&ES	0.2	50	50	ENSMUST00000143047.8	ENSMUSG00000078350.12	Smim1	chr4	protein_coding	small integral membrane protein 1
chr4	154108344	154108524	-	154108348	154108524	A3SS	0.33	50	50	ENSMUST00000143047.8	ENSMUSG00000078350.12	Smim1	chr4	protein_coding	small integral membrane protein 1
chr4	154108344	154109961	-	154108650	154109961	A3SS&ES	0.2	50	50	ENSMUST00000143047.8	ENSMUSG00000078350.12	Smim1	chr4	protein_coding	small integral membrane protein 1
chr4	154108807	154109961	-	154108650	154109961	A3SS	0.2	50	50	ENSMUST00000143047.8	ENSMUSG00000078350.12	Smim1	chr4	protein_coding	small integral membrane protein 1
chr4	154110078	154110314	-	154110078	154110366	A5SS	0.5	50	50	ENSMUST00000143047.8	ENSMUSG00000078350.12	Smim1	chr4	protein_coding	small integral membrane protein 1
chr4	154108274;154108650	154108524;154109961	-	154108274	154109961	cassetteExon	0.5	100	100	ENSMUST00000125533.9	ENSMUSG00000078350.12	Smim1	chr4	protein_coding	small integral membrane protein 1
chr4	154108274;154108807	154108524;154109961	-	154108274	154109961	cassetteExon	0.5	100	100	ENSMUST00000125533.9	ENSMUSG00000078350.12	Smim1	chr4	protein_coding	small integral membrane protein 1
chr4	154108344	154109961	-	154108274	154109961	A3SS	0.2	50	50	ENSMUST00000125533.9	ENSMUSG00000078350.12	Smim1	chr4	protein_coding	small integral membrane protein 1
chr4	154108348	154109961	-	154108348	154108524	A5SS	0.5	50	50	ENSMUST00000126119.8	ENSMUSG00000078350.12	Smim1	chr4	protein_coding	small integral membrane protein 1
chr4	154108274	154109961	-	154108807	154109961	A3SS&ES	0.2	50	50	ENSMUST00000146543.9	ENSMUSG00000078350.12	Smim1	chr4	protein_coding	small integral membrane protein 1
chr4	154108344	154109961	-	154108807	154109961	A3SS&ES	0.2	50	50	ENSMUST00000146543.9	ENSMUSG00000078350.12	Smim1	chr4	protein_coding	small integral membrane protein 1
chr4	154108344;154108650	154108524;154109961	-	154108344	154109961	cassetteExon	0.5	100	100	ENSMUST00000132541.8	ENSMUSG00000078350.12	Smim1	chr4	protein_coding	small integral membrane protein 1
chr4	154108344;154108807	154108524;154109961	-	154108344	154109961	cassetteExon	0.5	100	100	ENSMUST00000132541.8	ENSMUSG00000078350.12	Smim1	chr4	protein_coding	small integral membrane protein 1
chr4	154108274	154109961	-	154108274	154108524	5pMXE	0.5	50	50	ENSMUST00000145527.8	ENSMUSG00000078350.12	Smim1	chr4	protein_coding	small integral membrane protein 1
chr4	154108344	154108524	-	154108274	154108524	A3SS	0.33	50	50	ENSMUST00000145527.8	ENSMUSG00000078350.12	Smim1	chr4	protein_coding	small integral membrane protein 1
chr4	154108344	154109961	-	154108344	154108524	5pMXE	0.5	50	50	ENSMUST00000139569.2	ENSMUSG00000078350.12	Smim1	chr4	protein_coding	small integral membrane protein 1
chr4	154143783	154145819	-	154143783;154145138	154145045;154145819	ES	0.5	50	50	ENSMUST00000239448.2	ENSMUSG00000029026.18	Trp73	chr4	protein_coding	transformation related protein 73
chr4	154145957	154146969	-	154145957;154146558	154146410;154146969	ES	0.33	50	50	ENSMUST00000239448.2	ENSMUSG00000029026.18	Trp73	chr4	protein_coding	transformation related protein 73
chr4	154166028	154169688	-	154166028	154188777	A5SS	0.33	50	50	ENSMUST00000239448.2	ENSMUSG00000029026.18	Trp73	chr4	protein_coding	transformation related protein 73
chr4	154166028	154181351	-	154166028	154188777	A5SS	0.33	50	50	ENSMUST00000239448.2	ENSMUSG00000029026.18	Trp73	chr4	protein_coding	transformation related protein 73
chr4	154189353	154200943	-	154189353	154224280	A5SS	0.5	50	50	ENSMUST00000239448.2	ENSMUSG00000029026.18	Trp73	chr4	protein_coding	transformation related protein 73
chr4	154166028	154169688	-	154166028	154181351	A5SS	0.33	50	50	ENSMUST00000133533.8	ENSMUSG00000029026.18	Trp73	chr4	protein_coding	transformation related protein 73
chr4	154143783;154145957	154145819;154146969	-	154143783;154145138	154145045;154146969	MXE	0.5	100	100	ENSMUST00000097762.11	ENSMUSG00000029026.18	Trp73	chr4	protein_coding	transformation related protein 73
chr4	154145138;154145957	154145819;154146969	-	154145138	154146969	cassetteExon	0.5	100	100	ENSMUST00000097762.11	ENSMUSG00000029026.18	Trp73	chr4	protein_coding	transformation related protein 73
chr4	154146558	154146969	-	154145138	154146969	A3SS	0.33	50	50	ENSMUST00000097762.11	ENSMUSG00000029026.18	Trp73	chr4	protein_coding	transformation related protein 73
chr4	154143783;154145138	154145045;154146969	-	154143783;154146558	154145819;154146969	MXE	0.5	100	100	ENSMUST00000105643.8	ENSMUSG00000029026.18	Trp73	chr4	protein_coding	transformation related protein 73
chr4	154236188	154237018	+	154236188;154236881	154236795;154237018	ES	0.5	50	50	ENSMUST00000030895.12	ENSMUSG00000029029.15	Wrap73	chr4	protein_coding	WD repeat containing, antisense to Trp73
chr4	154240749	154251565	+	154240749	154240989	3pMXE	0.5	50	50	ENSMUST00000030895.12	ENSMUSG00000029029.15	Wrap73	chr4	protein_coding	WD repeat containing, antisense to Trp73
chr4	154243022	154244542	-	154243022;154243879	154243726;154244542	ES	0.5	50	50	ENSMUST00000030896.15	ENSMUSG00000029030.15	Tprgl	chr4	protein_coding	transformation related protein 63 regulated like
chr4	154243879	154244812	-	154243879;154244718	154244542;154244812	ES	0.5	50	50	ENSMUST00000030896.15	ENSMUSG00000029030.15	Tprgl	chr4	protein_coding	transformation related protein 63 regulated like
chr4	154243879	154244498	-	154243879	154244542	A5SS	0.33	50	50	ENSMUST00000030896.15	ENSMUSG00000029030.15	Tprgl	chr4	protein_coding	transformation related protein 63 regulated like
chr4	154243022;154243879	154243726;154244812	-	154243022;154244718	154244542;154244812	MXE	0.5	100	100	ENSMUST00000134492.2	ENSMUSG00000029030.15	Tprgl	chr4	protein_coding	transformation related protein 63 regulated like
chr4	154243879;154244718	154244498;154244812	-	154243879	154244812	cassetteExon	0.5	100	100	ENSMUST00000105639.4	ENSMUSG00000029030.15	Tprgl	chr4	protein_coding	transformation related protein 63 regulated like
chr4	154243879	154244812	-	154243879	154244498	5pMXE	0.33	50	50	ENSMUST00000136374.2	ENSMUSG00000029030.15	Tprgl	chr4	protein_coding	transformation related protein 63 regulated like
chr4	154243022	154244542	-	154243022	154243726	A5SS&ES	0.5	50	50	ENSMUST00000136374.2	ENSMUSG00000029030.15	Tprgl	chr4	protein_coding	transformation related protein 63 regulated like
chr4	154243879	154244812	-	154244718	154244812	3pMXE	0.5	50	50	ENSMUST00000133165.2	ENSMUSG00000029030.15	Tprgl	chr4	protein_coding	transformation related protein 63 regulated like
chr4	154351036	154351890	+	154351036;154351775	154351647;154351890	ES	0.5	50	50	ENSMUST00000030897.15	ENSMUSG00000057751.15	Megf6	chr4	protein_coding	multiple EGF-like-domains 6
chr4	154352018	154352391	+	154352018;154352244	154352113;154352391	ES	0.5	50	50	ENSMUST00000030897.15	ENSMUSG00000057751.15	Megf6	chr4	protein_coding	multiple EGF-like-domains 6
chr4	154354478	154355182	+	154354478	154354859	A3SS&ES	0.5	50	50	ENSMUST00000030897.15	ENSMUSG00000057751.15	Megf6	chr4	protein_coding	multiple EGF-like-domains 6
chr4	154322337	154326859	+	154308680	154326859	A5SS	0.5	50	50	ENSMUST00000030897.15	ENSMUSG00000057751.15	Megf6	chr4	protein_coding	multiple EGF-like-domains 6
chr4	154349134	154349527	+	154348234	154349527	A5SS	0.5	50	50	ENSMUST00000030897.15	ENSMUSG00000057751.15	Megf6	chr4	protein_coding	multiple EGF-like-domains 6
chr4	154349872	154350117	+	154349872	154350908	A3SS	0.5	50	50	ENSMUST00000152159.8	ENSMUSG00000057751.15	Megf6	chr4	protein_coding	multiple EGF-like-domains 6
chr4	154350719	154350908	+	154349872	154350908	A5SS	0.5	50	50	ENSMUST00000152159.8	ENSMUSG00000057751.15	Megf6	chr4	protein_coding	multiple EGF-like-domains 6
chr4	154376010	154384282	-	154376010;154377399	154377289;154384282	ES	0.5	50	50	ENSMUST00000144145.8	ENSMUSG00000029032.13	Arhgef16	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 16
chr4	154376010	154386009	-	154376010	154384282	5pMXE	0.33	50	50	ENSMUST00000030898.12	ENSMUSG00000029032.13	Arhgef16	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 16
chr4	154376010	154377289	-	154376010	154386009	A5SS	0.33	50	50	ENSMUST00000169623.8	ENSMUSG00000029032.13	Arhgef16	chr4	protein_coding	Rho guanine nucleotide exchange factor (GEF) 16
chr4	154405379	154407704	-	154405379;154406902	154406728;154407704	ES	0.5	50	50	ENSMUST00000030902.13	ENSMUSG00000039410.17	Prdm16	chr4	protein_coding	PR domain containing 16
chr4	154405322	154406728	-	154405379	154406728	A3SS	0.5	50	50	ENSMUST00000030902.13	ENSMUSG00000039410.17	Prdm16	chr4	protein_coding	PR domain containing 16
chr4	154422187	154425178	-	154422184	154425178	A3SS	0.5	50	50	ENSMUST00000030902.13	ENSMUSG00000039410.17	Prdm16	chr4	protein_coding	PR domain containing 16
chr4	154451769	154561096	-	154451772	154561096	A3SS	0.5	50	50	ENSMUST00000030902.13	ENSMUSG00000039410.17	Prdm16	chr4	protein_coding	PR domain containing 16
chr4	154561146	154613039	-	154561143	154613039	A3SS	0.5	50	50	ENSMUST00000030902.13	ENSMUSG00000039410.17	Prdm16	chr4	protein_coding	PR domain containing 16
chr4	154418909	154419032	-	154418909	154419550	A5SS	0.33	50	50	ENSMUST00000030902.13	ENSMUSG00000039410.17	Prdm16	chr4	protein_coding	PR domain containing 16
chr4	154418909	154419307	-	154418909	154419550	A5SS	0.33	50	50	ENSMUST00000030902.13	ENSMUSG00000039410.17	Prdm16	chr4	protein_coding	PR domain containing 16
chr4	154432591	154432727	-	154432591	154439704	A5SS	0.5	50	50	ENSMUST00000030902.13	ENSMUSG00000039410.17	Prdm16	chr4	protein_coding	PR domain containing 16
chr4	154439806	154451631	-	154439806	154451635	A5SS	0.5	50	50	ENSMUST00000030902.13	ENSMUSG00000039410.17	Prdm16	chr4	protein_coding	PR domain containing 16
chr4	154405379	154407704	-	154406902	154407704	A3SS&ES	0.5	50	50	ENSMUST00000097759.9	ENSMUSG00000039410.17	Prdm16	chr4	protein_coding	PR domain containing 16
chr4	154418909	154419307	-	154418909	154419032	A5SS	0.33	50	50	ENSMUST00000145217.8	ENSMUSG00000039410.17	Prdm16	chr4	protein_coding	PR domain containing 16
chr4	154685864	154686517	+	154685864	154688484	A3SS	0.5	50	50	ENSMUST00000144347.2	ENSMUSG00000084987.2	Gm13134	chr4	lncRNA	predicted gene 13134
chr4	154953076	154956422	-	154953076	154953834	5pMXE	0.5	50	50	ENSMUST00000138795.8	ENSMUSG00000087437.8	Gm13112	chr4	lncRNA	predicted gene 13112
chr4	154956233	154966727	+	154956233;154966172	154966104;154966727	ES	0.5	50	50	ENSMUST00000079269.14	ENSMUSG00000058183.15	Mmel1	chr4	protein_coding	membrane metallo-endopeptidase-like 1
chr4	154972383;154973762	154973652;154973964	+	154972383	154973964	cassetteExon	0.5	100	100	ENSMUST00000079269.14	ENSMUSG00000058183.15	Mmel1	chr4	protein_coding	membrane metallo-endopeptidase-like 1
chr4	154979494	154979583	+	154979500	154979583	A5SS	0.5	50	50	ENSMUST00000079269.14	ENSMUSG00000058183.15	Mmel1	chr4	protein_coding	membrane metallo-endopeptidase-like 1
chr4	154981881	154981963	-	154980065	154981963	A3SS	0.5	50	50	ENSMUST00000123513.2	ENSMUSG00000029059.10	Prxl2b	chr4	protein_coding	peroxiredoxin like 2B
chr4	155011704;155011974	155011885;155012435	-	155011704	155012435	cassetteExon	0.5	100	100	ENSMUST00000219534.3	ENSMUSG00000042333.17	Tnfrsf14	chr4	protein_coding	tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator)
chr4	155006781	155006937	-	155006784	155006937	A3SS	0.5	50	50	ENSMUST00000219534.3	ENSMUSG00000042333.17	Tnfrsf14	chr4	protein_coding	tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator)
chr4	155011704	155012435	-	155009875	155012435	A3SS	0.33	50	50	ENSMUST00000152687.8	ENSMUSG00000042333.17	Tnfrsf14	chr4	protein_coding	tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator)
chr4	155011974	155012435	-	155009875	155012435	A3SS	0.33	50	50	ENSMUST00000152687.8	ENSMUSG00000042333.17	Tnfrsf14	chr4	protein_coding	tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator)
chr4	155009875	155011056	-	155009875	155012435	A5SS	0.5	50	50	ENSMUST00000152687.8	ENSMUSG00000042333.17	Tnfrsf14	chr4	protein_coding	tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator)
chr4	155064251;155064691	155064551;155064952	+	155064251	155064952	cassetteExon	0.5	100	100	ENSMUST00000030931.11	ENSMUSG00000029056.14	Pank4	chr4	protein_coding	pantothenate kinase 4
chr4	155061127	155061669	+	155061127	155061660	A3SS	0.5	50	50	ENSMUST00000030931.11	ENSMUSG00000029056.14	Pank4	chr4	protein_coding	pantothenate kinase 4
chr4	155062899	155063412	+	155062899	155063378	A3SS	0.5	50	50	ENSMUST00000030931.11	ENSMUSG00000029056.14	Pank4	chr4	protein_coding	pantothenate kinase 4
chr4	155074474	155075472	-	155074474;155075253	155075146;155075472	ES	0.5	50	50	ENSMUST00000105631.9	ENSMUSG00000029055.18	Plch2	chr4	protein_coding	phospholipase C, eta 2
chr4	155093594	155103371	-	155093594	155095096	5pMXE	0.16	50	50	ENSMUST00000105631.9	ENSMUSG00000029055.18	Plch2	chr4	protein_coding	phospholipase C, eta 2
chr4	155093594	155103657	-	155093594	155095096	5pMXE	0.16	50	50	ENSMUST00000105631.9	ENSMUSG00000029055.18	Plch2	chr4	protein_coding	phospholipase C, eta 2
chr4	155093594	155127423	-	155093594	155095096	5pMXE	0.16	50	50	ENSMUST00000105631.9	ENSMUSG00000029055.18	Plch2	chr4	protein_coding	phospholipase C, eta 2
chr4	155093594	155138939	-	155093594	155095096	5pMXE	0.16	50	50	ENSMUST00000105631.9	ENSMUSG00000029055.18	Plch2	chr4	protein_coding	phospholipase C, eta 2
chr4	155069422;155069849	155069823;155071176	-	155069422	155071176	cassetteExon	0.5	100	100	ENSMUST00000105631.9	ENSMUSG00000029055.18	Plch2	chr4	protein_coding	phospholipase C, eta 2
chr4	155093594	155095324	-	155093594	155095096	A5SS	0.16	50	50	ENSMUST00000105631.9	ENSMUSG00000029055.18	Plch2	chr4	protein_coding	phospholipase C, eta 2
chr4	155069422	155071176	-	155069422	155069823	A5SS	0.5	50	50	ENSMUST00000127661.8	ENSMUSG00000029055.18	Plch2	chr4	protein_coding	phospholipase C, eta 2
chr4	155069849	155070672	-	155069849	155071176	A5SS	0.5	50	50	ENSMUST00000124517.9	ENSMUSG00000029055.18	Plch2	chr4	protein_coding	phospholipase C, eta 2
chr4	155093594	155127423	-	155093594	155103657	5pMXE	0.16	50	50	ENSMUST00000176194.8	ENSMUSG00000029055.18	Plch2	chr4	protein_coding	phospholipase C, eta 2
chr4	155093594	155138939	-	155093594	155103657	5pMXE	0.16	50	50	ENSMUST00000176194.8	ENSMUSG00000029055.18	Plch2	chr4	protein_coding	phospholipase C, eta 2
chr4	155093594;155103562	155103371;155103657	-	155093594	155103657	cassetteExon	0.5	100	100	ENSMUST00000176194.8	ENSMUSG00000029055.18	Plch2	chr4	protein_coding	phospholipase C, eta 2
chr4	155093594	155095324	-	155093594	155103657	A5SS	0.16	50	50	ENSMUST00000176194.8	ENSMUSG00000029055.18	Plch2	chr4	protein_coding	phospholipase C, eta 2
chr4	155093594	155138939	-	155093594	155127423	5pMXE	0.16	50	50	ENSMUST00000135665.9	ENSMUSG00000029055.18	Plch2	chr4	protein_coding	phospholipase C, eta 2
chr4	155093594	155095324	-	155093594	155127423	A5SS	0.16	50	50	ENSMUST00000135665.9	ENSMUSG00000029055.18	Plch2	chr4	protein_coding	phospholipase C, eta 2
chr4	155093594	155103371	-	155093594	155127423	A5SS	0.16	50	50	ENSMUST00000135665.9	ENSMUSG00000029055.18	Plch2	chr4	protein_coding	phospholipase C, eta 2
chr4	155093594	155095324	-	155093594	155138939	A5SS	0.16	50	50	ENSMUST00000186598.7	ENSMUSG00000029055.18	Plch2	chr4	protein_coding	phospholipase C, eta 2
chr4	155093594	155103371	-	155093594	155138939	A5SS	0.16	50	50	ENSMUST00000186598.7	ENSMUSG00000029055.18	Plch2	chr4	protein_coding	phospholipase C, eta 2
chr4	155093594	155103371	-	155093594	155095324	5pMXE	0.16	50	50	ENSMUST00000145662.9	ENSMUSG00000029055.18	Plch2	chr4	protein_coding	phospholipase C, eta 2
chr4	155151701	155152280	+	155151631	155152280	A5SS	0.33	50	50	ENSMUST00000103180.4	ENSMUSG00000029047.14	Pex10	chr4	protein_coding	peroxisomal biogenesis factor 10
chr4	155151726	155152280	+	155151631	155152280	A5SS	0.33	50	50	ENSMUST00000103180.4	ENSMUSG00000029047.14	Pex10	chr4	protein_coding	peroxisomal biogenesis factor 10
chr4	155151726	155152280	+	155151701	155152280	A5SS	0.33	50	50	ENSMUST00000123395.8	ENSMUSG00000029047.14	Pex10	chr4	protein_coding	peroxisomal biogenesis factor 10
chr4	155167211	155170662	-	155167211;155167774	155167566;155170662	ES	0.33	50	50	ENSMUST00000149796.2	ENSMUSG00000029048.4	Rer1	chr4	protein_coding	retention in endoplasmic reticulum sorting receptor 1
chr4	155167693	155170662	-	155167774	155170662	A3SS	0.33	50	50	ENSMUST00000149796.2	ENSMUSG00000029048.4	Rer1	chr4	protein_coding	retention in endoplasmic reticulum sorting receptor 1
chr4	155167211;155167693	155167566;155170662	-	155167211	155170662	cassetteExon	0.5	100	100	ENSMUST00000030914.4	ENSMUSG00000029048.4	Rer1	chr4	protein_coding	retention in endoplasmic reticulum sorting receptor 1
chr4	155174041	155176726	+	155174041;155175450	155175340;155176726	ES	0.5	50	50	ENSMUST00000132367.8	ENSMUSG00000029049.15	Morn1	chr4	protein_coding	MORN repeat containing 1
chr4	155177606	155177728	+	155177606	155185723	A3SS	0.5	50	50	ENSMUST00000132367.8	ENSMUSG00000029049.15	Morn1	chr4	protein_coding	MORN repeat containing 1
chr4	155171344	155171878	+	155171138	155171878	A5SS	0.5	50	50	ENSMUST00000132367.8	ENSMUSG00000029049.15	Morn1	chr4	protein_coding	MORN repeat containing 1
chr4	155186657	155195386	+	155186657	155195385	A3SS	0.5	50	50	ENSMUST00000030915.11	ENSMUSG00000029049.15	Morn1	chr4	protein_coding	MORN repeat containing 1
chr4	155196046	155213140	+	155196046	155213136	A3SS	0.5	50	50	ENSMUST00000030915.11	ENSMUSG00000029049.15	Morn1	chr4	protein_coding	MORN repeat containing 1
chr4	155213422	155223917	+	155213422	155226859	A3SS	0.5	50	50	ENSMUST00000030915.11	ENSMUSG00000029049.15	Morn1	chr4	protein_coding	MORN repeat containing 1
chr4	155245413	155306009	-	155245413	155272714	5pMXE	0.5	50	50	ENSMUST00000129314.2	ENSMUSG00000029050.16	Ski	chr4	protein_coding	ski sarcoma viral oncogene homolog (avian)
chr4	155334420	155334963	+	155334420	155334997	A3SS	0.33	50	50	ENSMUST00000126803.8	ENSMUSG00000073684.14	Faap20	chr4	protein_coding	Fanconi anemia core complex associated protein 20
chr4	155334420	155335002	+	155334420	155334997	A3SS	0.33	50	50	ENSMUST00000126803.8	ENSMUSG00000073684.14	Faap20	chr4	protein_coding	Fanconi anemia core complex associated protein 20
chr4	155334420	155335002	+	155334420	155334963	A3SS	0.33	50	50	ENSMUST00000126713.2	ENSMUSG00000073684.14	Faap20	chr4	protein_coding	Fanconi anemia core complex associated protein 20
chr4	155334519	155334963	+	155334420	155334963	A5SS	0.5	50	50	ENSMUST00000126713.2	ENSMUSG00000073684.14	Faap20	chr4	protein_coding	Fanconi anemia core complex associated protein 20
chr4	155334519	155334963	+	155334519	155335006	A3SS	0.25	50	50	ENSMUST00000122957.2	ENSMUSG00000073684.14	Faap20	chr4	protein_coding	Fanconi anemia core complex associated protein 20
chr4	155334519	155334964	+	155334519	155335006	A3SS	0.25	50	50	ENSMUST00000122957.2	ENSMUSG00000073684.14	Faap20	chr4	protein_coding	Fanconi anemia core complex associated protein 20
chr4	155334519	155335002	+	155334519	155335006	A3SS	0.25	50	50	ENSMUST00000122957.2	ENSMUSG00000073684.14	Faap20	chr4	protein_coding	Fanconi anemia core complex associated protein 20
chr4	155334519	155335002	+	155334420	155335002	A5SS	0.33	50	50	ENSMUST00000149468.8	ENSMUSG00000073684.14	Faap20	chr4	protein_coding	Fanconi anemia core complex associated protein 20
chr4	155334809	155335002	+	155334420	155335002	A5SS	0.33	50	50	ENSMUST00000149468.8	ENSMUSG00000073684.14	Faap20	chr4	protein_coding	Fanconi anemia core complex associated protein 20
chr4	155334519	155335002	+	155334519	155334964	A3SS	0.25	50	50	ENSMUST00000148406.8	ENSMUSG00000073684.14	Faap20	chr4	protein_coding	Fanconi anemia core complex associated protein 20
chr4	155334519	155334964	+	155334519	155334963	A3SS	0.25	50	50	ENSMUST00000178473.8	ENSMUSG00000073684.14	Faap20	chr4	protein_coding	Fanconi anemia core complex associated protein 20
chr4	155334519	155335002	+	155334519	155334963	A3SS	0.25	50	50	ENSMUST00000178473.8	ENSMUSG00000073684.14	Faap20	chr4	protein_coding	Fanconi anemia core complex associated protein 20
chr4	155334809	155335002	+	155334519	155335002	A5SS	0.33	50	50	ENSMUST00000105627.8	ENSMUSG00000073684.14	Faap20	chr4	protein_coding	Fanconi anemia core complex associated protein 20
chr4	155385472	155439111	-	155385472	155429907	5pMXE	0.2	50	50	ENSMUST00000103178.11	ENSMUSG00000029053.17	Prkcz	chr4	protein_coding	protein kinase C, zeta
chr4	155378892	155385387	-	155378855	155385387	A3SS	0.5	50	50	ENSMUST00000103178.11	ENSMUSG00000029053.17	Prkcz	chr4	protein_coding	protein kinase C, zeta
chr4	155385472	155414690	-	155385472	155429907	A5SS	0.2	50	50	ENSMUST00000103178.11	ENSMUSG00000029053.17	Prkcz	chr4	protein_coding	protein kinase C, zeta
chr4	155385472	155429140	-	155385472	155429907	A5SS	0.2	50	50	ENSMUST00000103178.11	ENSMUSG00000029053.17	Prkcz	chr4	protein_coding	protein kinase C, zeta
chr4	155385472	155429608	-	155385472	155429907	A5SS	0.2	50	50	ENSMUST00000103178.11	ENSMUSG00000029053.17	Prkcz	chr4	protein_coding	protein kinase C, zeta
chr4	155385472	155414690	-	155385472	155439111	A5SS	0.2	50	50	ENSMUST00000030922.15	ENSMUSG00000029053.17	Prkcz	chr4	protein_coding	protein kinase C, zeta
chr4	155385472	155429140	-	155385472	155439111	A5SS	0.2	50	50	ENSMUST00000030922.15	ENSMUSG00000029053.17	Prkcz	chr4	protein_coding	protein kinase C, zeta
chr4	155385472	155429608	-	155385472	155439111	A5SS	0.2	50	50	ENSMUST00000030922.15	ENSMUSG00000029053.17	Prkcz	chr4	protein_coding	protein kinase C, zeta
chr4	155385472;155415122	155414690;155429140	-	155385472	155429140	cassetteExon	0.5	100	100	ENSMUST00000131975.8	ENSMUSG00000029053.17	Prkcz	chr4	protein_coding	protein kinase C, zeta
chr4	155385472	155429608	-	155385472	155429140	A5SS	0.2	50	50	ENSMUST00000131975.8	ENSMUSG00000029053.17	Prkcz	chr4	protein_coding	protein kinase C, zeta
chr4	155385472	155414690	-	155385472	155429608	A5SS	0.2	50	50	ENSMUST00000123652.8	ENSMUSG00000029053.17	Prkcz	chr4	protein_coding	protein kinase C, zeta
chr4	155473503;155482200	155482099;155482352	-	155473503	155482352	cassetteExon	0.5	100	100	ENSMUST00000150423.8	ENSMUSG00000029054.9	Gabrd	chr4	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit delta
chr4	155494154	155499178	-	155485859	155499178	A3SS	0.25	50	50	ENSMUST00000166921.8	ENSMUSG00000084803.9	5830444B04Rik	chr4	lncRNA	RIKEN cDNA 5830444B04 gene
chr4	155498344	155499178	-	155485859	155499178	A3SS	0.25	50	50	ENSMUST00000166921.8	ENSMUSG00000084803.9	5830444B04Rik	chr4	lncRNA	RIKEN cDNA 5830444B04 gene
chr4	155498347	155499178	-	155485859	155499178	A3SS	0.25	50	50	ENSMUST00000166921.8	ENSMUSG00000084803.9	5830444B04Rik	chr4	lncRNA	RIKEN cDNA 5830444B04 gene
chr4	155494154;155498344	155498176;155499178	-	155494154	155499178	cassetteExon	0.5	100	100	ENSMUST00000152780.2	ENSMUSG00000084803.9	5830444B04Rik	chr4	lncRNA	RIKEN cDNA 5830444B04 gene
chr4	155494154;155498347	155498176;155499178	-	155494154	155499178	cassetteExon	0.5	100	100	ENSMUST00000152780.2	ENSMUSG00000084803.9	5830444B04Rik	chr4	lncRNA	RIKEN cDNA 5830444B04 gene
chr4	155494154	155498176	-	155496269	155498176	A3SS&ES	0.5	50	50	ENSMUST00000145520.3	ENSMUSG00000084803.9	5830444B04Rik	chr4	lncRNA	RIKEN cDNA 5830444B04 gene
chr4	155494154	155499178	-	155498344	155499178	A3SS&ES	0.33	50	50	ENSMUST00000145520.3	ENSMUSG00000084803.9	5830444B04Rik	chr4	lncRNA	RIKEN cDNA 5830444B04 gene
chr4	155498347	155499178	-	155498344	155499178	A3SS	0.33	50	50	ENSMUST00000145520.3	ENSMUSG00000084803.9	5830444B04Rik	chr4	lncRNA	RIKEN cDNA 5830444B04 gene
chr4	155526596	155531095	+	155526596	155527295	3pMXE	0.5	50	50	ENSMUST00000094408.10	ENSMUSG00000078490.11	Cfap74	chr4	protein_coding	cilia and flagella associated protein 74
chr4	155550298	155550761	+	155550298;155550653	155550519;155550761	ES	0.5	50	50	ENSMUST00000238423.2	ENSMUSG00000078490.11	Cfap74	chr4	protein_coding	cilia and flagella associated protein 74
chr4	155531216	155531896	+	155531216	155536135	A3SS	0.33	50	50	ENSMUST00000238423.2	ENSMUSG00000078490.11	Cfap74	chr4	protein_coding	cilia and flagella associated protein 74
chr4	155531216	155531940	+	155531216	155536135	A3SS	0.33	50	50	ENSMUST00000238423.2	ENSMUSG00000078490.11	Cfap74	chr4	protein_coding	cilia and flagella associated protein 74
chr4	155547788	155547905	+	155547788	155547892	A3SS	0.5	50	50	ENSMUST00000238423.2	ENSMUSG00000078490.11	Cfap74	chr4	protein_coding	cilia and flagella associated protein 74
chr4	155550653	155550765	+	155550653	155550761	A3SS	0.5	50	50	ENSMUST00000238423.2	ENSMUSG00000078490.11	Cfap74	chr4	protein_coding	cilia and flagella associated protein 74
chr4	155550298	155550761	+	155550298	155550519	A3SS&ES	0.5	50	50	ENSMUST00000238620.2	ENSMUSG00000078490.11	Cfap74	chr4	protein_coding	cilia and flagella associated protein 74
chr4	155531216	155531896	+	155531216	155531940	A3SS	0.33	50	50	ENSMUST00000050128.11	ENSMUSG00000078490.11	Cfap74	chr4	protein_coding	cilia and flagella associated protein 74
chr4	155553803	155554446	+	155553960	155554446	A5SS	0.5	50	50	ENSMUST00000131599.8	ENSMUSG00000023153.10	Tmem52	chr4	protein_coding	transmembrane protein 52
chr4	155553803;155553960	155553901;155554446	+	155553803	155554446	cassetteExon	0.5	100	100	ENSMUST00000178188.8	ENSMUSG00000023153.10	Tmem52	chr4	protein_coding	transmembrane protein 52
chr4	155553803;155553960	155553919;155554446	+	155553803	155554446	cassetteExon	0.5	100	100	ENSMUST00000178188.8	ENSMUSG00000023153.10	Tmem52	chr4	protein_coding	transmembrane protein 52
chr4	155553803	155553919	+	155553803	155553901	A3SS	0.33	50	50	ENSMUST00000178238.8	ENSMUSG00000023153.10	Tmem52	chr4	protein_coding	transmembrane protein 52
chr4	155576037	155611870	+	155576037;155600136	155600088;155611870	ES	0.25	50	50	ENSMUST00000165335.8	ENSMUSG00000029064.16	Gnb1	chr4	protein_coding	guanine nucleotide binding protein (G protein), beta 1
chr4	155641743	155641928	+	155641743	155641925	A3SS	0.5	50	50	ENSMUST00000165335.8	ENSMUSG00000029064.16	Gnb1	chr4	protein_coding	guanine nucleotide binding protein (G protein), beta 1
chr4	155577501	155611870	+	155600136	155611870	A5SS&ES	0.25	50	50	ENSMUST00000165335.8	ENSMUSG00000029064.16	Gnb1	chr4	protein_coding	guanine nucleotide binding protein (G protein), beta 1
chr4	155607115	155611870	+	155600136	155611870	A5SS	0.25	50	50	ENSMUST00000165335.8	ENSMUSG00000029064.16	Gnb1	chr4	protein_coding	guanine nucleotide binding protein (G protein), beta 1
chr4	155577501	155611870	+	155576037	155611870	A5SS	0.25	50	50	ENSMUST00000105616.10	ENSMUSG00000029064.16	Gnb1	chr4	protein_coding	guanine nucleotide binding protein (G protein), beta 1
chr4	155607115	155611870	+	155576037	155611870	A5SS	0.25	50	50	ENSMUST00000105616.10	ENSMUSG00000029064.16	Gnb1	chr4	protein_coding	guanine nucleotide binding protein (G protein), beta 1
chr4	155607115	155611870	+	155577501	155611870	A5SS	0.25	50	50	ENSMUST00000176411.8	ENSMUSG00000029064.16	Gnb1	chr4	protein_coding	guanine nucleotide binding protein (G protein), beta 1
chr4	155672241	155673067	+	155672241;155672475	155672318;155673067	ES	0.5	50	50	ENSMUST00000030939.14	ENSMUSG00000029063.17	Nadk	chr4	protein_coding	NAD kinase
chr4	155648436	155661450	+	155646912	155661450	A5SS	0.25	50	50	ENSMUST00000030939.14	ENSMUSG00000029063.17	Nadk	chr4	protein_coding	NAD kinase
chr4	155661239	155661450	+	155646912	155661450	A5SS	0.25	50	50	ENSMUST00000030939.14	ENSMUSG00000029063.17	Nadk	chr4	protein_coding	NAD kinase
chr4	155661347	155661450	+	155646912	155661450	A5SS	0.25	50	50	ENSMUST00000030939.14	ENSMUSG00000029063.17	Nadk	chr4	protein_coding	NAD kinase
chr4	155667105	155668594	+	155663851	155668594	A5SS	0.5	50	50	ENSMUST00000030939.14	ENSMUSG00000029063.17	Nadk	chr4	protein_coding	NAD kinase
chr4	155648436;155661239	155661185;155661450	+	155648436	155661450	cassetteExon	0.5	100	100	ENSMUST00000105613.10	ENSMUSG00000029063.17	Nadk	chr4	protein_coding	NAD kinase
chr4	155648436;155661347	155661185;155661450	+	155648436	155661450	cassetteExon	0.5	100	100	ENSMUST00000105613.10	ENSMUSG00000029063.17	Nadk	chr4	protein_coding	NAD kinase
chr4	155648436	155661450	+	155648436	155661185	A3SS	0.5	50	50	ENSMUST00000147062.2	ENSMUSG00000029063.17	Nadk	chr4	protein_coding	NAD kinase
chr4	155648626	155661185	+	155648436	155661185	A5SS	0.5	50	50	ENSMUST00000147062.2	ENSMUSG00000029063.17	Nadk	chr4	protein_coding	NAD kinase
chr4	155661239	155661450	+	155661347	155661450	A5SS	0.33	50	50	ENSMUST00000143840.2	ENSMUSG00000029063.17	Nadk	chr4	protein_coding	NAD kinase
chr4	155686259	155694296	+	155686195	155694296	A5SS	0.33	50	50	ENSMUST00000105608.9	ENSMUSG00000042202.16	Slc35e2	chr4	protein_coding	solute carrier family 35, member E2
chr4	155686619	155694296	+	155686195	155694296	A5SS	0.33	50	50	ENSMUST00000105608.9	ENSMUSG00000042202.16	Slc35e2	chr4	protein_coding	solute carrier family 35, member E2
chr4	155686619	155694296	+	155686259	155694296	A5SS	0.33	50	50	ENSMUST00000043829.11	ENSMUSG00000042202.16	Slc35e2	chr4	protein_coding	solute carrier family 35, member E2
chr4	155700757	155708816	-	155694971	155708816	A3SS	0.5	50	50	ENSMUST00000137752.2	ENSMUSG00000086682.2	Gm16023	chr4	lncRNA	predicted gene 16023
chr4	155709398	155709988	+	155709398;155709796	155709642;155709988	ES	0.5	50	50	ENSMUST00000135550.8	ENSMUSG00000029062.15	Cdk11b	chr4	protein_coding	cyclin-dependent kinase 11B
chr4	155710111	155711231	+	155710111;155710230	155710184;155711231	ES	0.5	50	50	ENSMUST00000135550.8	ENSMUSG00000029062.15	Cdk11b	chr4	protein_coding	cyclin-dependent kinase 11B
chr4	155732424	155732682	+	155732424	155732740	A3SS	0.5	50	50	ENSMUST00000067081.10	ENSMUSG00000029062.15	Cdk11b	chr4	protein_coding	cyclin-dependent kinase 11B
chr4	155710111	155711231	+	155710230	155711231	A5SS	0.5	50	50	ENSMUST00000105598.2	ENSMUSG00000029062.15	Cdk11b	chr4	protein_coding	cyclin-dependent kinase 11B
chr4	155739896	155739979	-	155739727	155739979	A3SS	0.5	50	50	ENSMUST00000128204.8	ENSMUSG00000029060.18	Mib2	chr4	protein_coding	mindbomb E3 ubiquitin protein ligase 2
chr4	155742416	155743580	-	155742416	155743351	A5SS	0.5	50	50	ENSMUST00000151843.8	ENSMUSG00000029060.18	Mib2	chr4	protein_coding	mindbomb E3 ubiquitin protein ligase 2
chr4	155742416;155743458	155743351;155743580	-	155742416	155743580	cassetteExon	0.5	100	100	ENSMUST00000103176.10	ENSMUSG00000029060.18	Mib2	chr4	protein_coding	mindbomb E3 ubiquitin protein ligase 2
chr4	155835050	155835325	-	155835055	155835325	A3SS	0.5	50	50	ENSMUST00000030903.12	ENSMUSG00000029036.19	Atad3a	chr4	protein_coding	ATPase family, AAA domain containing 3A
chr4	155838226	155838339	-	155838093	155838339	A3SS	0.5	50	50	ENSMUST00000030903.12	ENSMUSG00000029036.19	Atad3a	chr4	protein_coding	ATPase family, AAA domain containing 3A
chr4	155838595	155839214	-	155838504	155839214	A3SS	0.5	50	50	ENSMUST00000030903.12	ENSMUSG00000029036.19	Atad3a	chr4	protein_coding	ATPase family, AAA domain containing 3A
chr4	155839309	155840136	-	155839283	155840136	A3SS	0.5	50	50	ENSMUST00000030903.12	ENSMUSG00000029036.19	Atad3a	chr4	protein_coding	ATPase family, AAA domain containing 3A
chr4	155845743	155845842	+	155845743	155851605	A3SS	0.33	50	50	ENSMUST00000174185.2	ENSMUSG00000054514.4	Atad3aos	chr4	lncRNA	ATPase family, AAA domain containing 3A, opposite strand
chr4	155845743	155847827	+	155845743	155851605	A3SS	0.33	50	50	ENSMUST00000174185.2	ENSMUSG00000054514.4	Atad3aos	chr4	lncRNA	ATPase family, AAA domain containing 3A, opposite strand
chr4	155845743	155847827	+	155845743	155845842	3pMXE	0.33	50	50	ENSMUST00000067628.2	ENSMUSG00000054514.4	Atad3aos	chr4	lncRNA	ATPase family, AAA domain containing 3A, opposite strand
chr4	155845743;155846234	155845842;155847827	+	155845743	155847827	cassetteExon	0.5	100	100	ENSMUST00000155010.2	ENSMUSG00000054514.4	Atad3aos	chr4	lncRNA	ATPase family, AAA domain containing 3A, opposite strand
chr4	155876589	155883931	+	155876589	155877265	3pMXE	0.5	50	50	ENSMUST00000165000.8	ENSMUSG00000078487.9	Ankrd65	chr4	protein_coding	ankyrin repeat domain 65
chr4	155888199	155891365	+	155888199;155888400	155888290;155891365	ES	0.5	50	50	ENSMUST00000030942.13	ENSMUSG00000029066.13	Mrpl20	chr4	protein_coding	mitochondrial ribosomal protein L20
chr4	155891442	155891773	+	155891442	155892936	A3SS	0.5	50	50	ENSMUST00000030942.13	ENSMUSG00000029066.13	Mrpl20	chr4	protein_coding	mitochondrial ribosomal protein L20
chr4	155888199	155891365	+	155888400	155891365	5pMXE	0.5	50	50	ENSMUST00000143503.2	ENSMUSG00000029066.13	Mrpl20	chr4	protein_coding	mitochondrial ribosomal protein L20
chr4	155902444;155903121	155902996;155904786	+	155902444	155904786	cassetteExon	0.5	100	100	ENSMUST00000030944.11	ENSMUSG00000029068.17	Ccnl2	chr4	protein_coding	cyclin L2
chr4	155902444	155904786	+	155902444	155902996	A3SS	0.5	50	50	ENSMUST00000139066.8	ENSMUSG00000029068.17	Ccnl2	chr4	protein_coding	cyclin L2
chr4	155916192	155916440	+	155915913	155916440	A5SS	0.33	50	50	ENSMUST00000139651.8	ENSMUSG00000065990.13	Aurkaip1	chr4	protein_coding	aurora kinase A interacting protein 1
chr4	155916223	155916440	+	155915913	155916440	A5SS	0.33	50	50	ENSMUST00000139651.8	ENSMUSG00000065990.13	Aurkaip1	chr4	protein_coding	aurora kinase A interacting protein 1
chr4	155916192	155916350	+	155916192	155916440	A3SS	0.5	50	50	ENSMUST00000084097.12	ENSMUSG00000065990.13	Aurkaip1	chr4	protein_coding	aurora kinase A interacting protein 1
chr4	155916223	155916440	+	155916192	155916440	A5SS	0.33	50	50	ENSMUST00000084097.12	ENSMUSG00000065990.13	Aurkaip1	chr4	protein_coding	aurora kinase A interacting protein 1
chr4	155925255	155925363	+	155925255	155925372	A3SS	0.5	50	50	ENSMUST00000141883.8	ENSMUSG00000029070.10	Mxra8	chr4	protein_coding	matrix-remodelling associated 8
chr4	155927438	155927833	+	155927438	155927516	A3SS&ES	0.5	50	50	ENSMUST00000030947.4	ENSMUSG00000029070.10	Mxra8	chr4	protein_coding	matrix-remodelling associated 8
chr4	155937944	155938440	+	155937944;155938215	155938094;155938440	ES	0.5	50	50	ENSMUST00000030948.16	ENSMUSG00000029071.17	Dvl1	chr4	protein_coding	dishevelled segment polarity protein 1
chr4	155940076;155941991	155941953;155942450	+	155940076;155941277	155940589;155942450	MXE	0.5	100	100	ENSMUST00000030948.16	ENSMUSG00000029071.17	Dvl1	chr4	protein_coding	dishevelled segment polarity protein 1
chr4	155941277;155941991	155941953;155942450	+	155941277	155942450	cassetteExon	0.5	100	100	ENSMUST00000030948.16	ENSMUSG00000029071.17	Dvl1	chr4	protein_coding	dishevelled segment polarity protein 1
chr4	155940001	155940589	+	155940076	155940589	A5SS	0.5	50	50	ENSMUST00000030948.16	ENSMUSG00000029071.17	Dvl1	chr4	protein_coding	dishevelled segment polarity protein 1
chr4	155937944	155938440	+	155937944	155938094	A3SS	0.5	50	50	ENSMUST00000156997.8	ENSMUSG00000029071.17	Dvl1	chr4	protein_coding	dishevelled segment polarity protein 1
chr4	155940076	155941953	+	155940076	155940589	A3SS&ES	0.5	50	50	ENSMUST00000156997.8	ENSMUSG00000029071.17	Dvl1	chr4	protein_coding	dishevelled segment polarity protein 1
chr4	155941277	155941953	+	155940076	155941953	A5SS	0.5	50	50	ENSMUST00000133184.8	ENSMUSG00000029071.17	Dvl1	chr4	protein_coding	dishevelled segment polarity protein 1
chr4	155941277	155942450	+	155941991	155942450	A5SS&ES	0.5	50	50	ENSMUST00000133184.8	ENSMUSG00000029071.17	Dvl1	chr4	protein_coding	dishevelled segment polarity protein 1
chr4	155951794	155953229	-	155951794	155953624	A5SS	0.5	50	50	ENSMUST00000030950.8	ENSMUSG00000029073.10	Cptp	chr4	protein_coding	ceramide-1-phosphate transfer protein
chr4	155957380	155959686	+	155957380	155959595	A3SS	0.33	50	50	ENSMUST00000120794.8	ENSMUSG00000029034.10	Ints11	chr4	protein_coding	integrator complex subunit 11
chr4	155957380	155969555	+	155957380	155959595	A3SS&ES	0.33	50	50	ENSMUST00000120794.8	ENSMUSG00000029034.10	Ints11	chr4	protein_coding	integrator complex subunit 11
chr4	155959823	155969555	+	155959823	155969621	A3SS	0.5	50	50	ENSMUST00000120794.8	ENSMUSG00000029034.10	Ints11	chr4	protein_coding	integrator complex subunit 11
chr4	155970617	155971255	+	155970613	155971255	A5SS	0.5	50	50	ENSMUST00000120794.8	ENSMUSG00000029034.10	Ints11	chr4	protein_coding	integrator complex subunit 11
chr4	155957380;155959823	155959595;155969555	+	155957380	155969555	cassetteExon	0.5	100	100	ENSMUST00000134678.8	ENSMUSG00000029034.10	Ints11	chr4	protein_coding	integrator complex subunit 11
chr4	155957380;155959823	155959686;155969555	+	155957380	155969555	cassetteExon	0.5	100	100	ENSMUST00000134678.8	ENSMUSG00000029034.10	Ints11	chr4	protein_coding	integrator complex subunit 11
chr4	155973625	155973891	-	155973224	155973891	A3SS	0.5	50	50	ENSMUST00000123504.2	ENSMUSG00000051557.16	Pusl1	chr4	protein_coding	pseudouridylate synthase-like 1
chr4	155975872	155976029	-	155975872	155976088	A5SS	0.5	50	50	ENSMUST00000097737.5	ENSMUSG00000051557.16	Pusl1	chr4	protein_coding	pseudouridylate synthase-like 1
chr4	155984818	155986132	+	155984818;155985472	155985461;155986132	ES	0.5	50	50	ENSMUST00000105584.10	ENSMUSG00000029033.17	Acap3	chr4	protein_coding	ArfGAP with coiled-coil, ankyrin repeat and PH domains 3
chr4	155976898;155980033	155979949;155980568	+	155976898	155980568	cassetteExon	0.5	100	100	ENSMUST00000105584.10	ENSMUSG00000029033.17	Acap3	chr4	protein_coding	ArfGAP with coiled-coil, ankyrin repeat and PH domains 3
chr4	155987924	155988208	+	155987970	155988208	A5SS	0.5	50	50	ENSMUST00000105584.10	ENSMUSG00000029033.17	Acap3	chr4	protein_coding	ArfGAP with coiled-coil, ankyrin repeat and PH domains 3
chr4	156040017	156041538	+	156040017;156040905	156040825;156041538	ES	0.5	50	50	ENSMUST00000103175.8	ENSMUSG00000023286.17	Ube2j2	chr4	protein_coding	ubiquitin-conjugating enzyme E2J 2
chr4	156028470;156030874	156030712;156033464	+	156028470	156033464	cassetteExon	0.5	100	100	ENSMUST00000103175.8	ENSMUSG00000023286.17	Ube2j2	chr4	protein_coding	ubiquitin-conjugating enzyme E2J 2
chr4	156028470	156028997	+	156028470	156033464	A3SS	0.33	50	50	ENSMUST00000103175.8	ENSMUSG00000023286.17	Ube2j2	chr4	protein_coding	ubiquitin-conjugating enzyme E2J 2
chr4	156028607	156033464	+	156028470	156033464	A5SS	0.33	50	50	ENSMUST00000103175.8	ENSMUSG00000023286.17	Ube2j2	chr4	protein_coding	ubiquitin-conjugating enzyme E2J 2
chr4	156028607;156030874	156030712;156033464	+	156028607	156033464	cassetteExon	0.5	100	100	ENSMUST00000166489.8	ENSMUSG00000023286.17	Ube2j2	chr4	protein_coding	ubiquitin-conjugating enzyme E2J 2
chr4	156028607	156035954	+	156028607	156033464	A3SS&ES	0.33	50	50	ENSMUST00000166489.8	ENSMUSG00000023286.17	Ube2j2	chr4	protein_coding	ubiquitin-conjugating enzyme E2J 2
chr4	156028607	156035954	+	156028607	156030712	A3SS&ES	0.33	50	50	ENSMUST00000024056.10	ENSMUSG00000023286.17	Ube2j2	chr4	protein_coding	ubiquitin-conjugating enzyme E2J 2
chr4	156028470	156030712	+	156028607	156030712	A5SS	0.25	50	50	ENSMUST00000024056.10	ENSMUSG00000023286.17	Ube2j2	chr4	protein_coding	ubiquitin-conjugating enzyme E2J 2
chr4	156028470	156033464	+	156030874	156033464	A5SS&ES	0.33	50	50	ENSMUST00000024056.10	ENSMUSG00000023286.17	Ube2j2	chr4	protein_coding	ubiquitin-conjugating enzyme E2J 2
chr4	156028716	156030712	+	156028607	156030712	A5SS	0.25	50	50	ENSMUST00000024056.10	ENSMUSG00000023286.17	Ube2j2	chr4	protein_coding	ubiquitin-conjugating enzyme E2J 2
chr4	156029091	156030712	+	156028607	156030712	A5SS	0.25	50	50	ENSMUST00000024056.10	ENSMUSG00000023286.17	Ube2j2	chr4	protein_coding	ubiquitin-conjugating enzyme E2J 2
chr4	156028470	156030712	+	156028470;156029091	156028997;156030712	ES	0.25	50	50	ENSMUST00000150846.8	ENSMUSG00000023286.17	Ube2j2	chr4	protein_coding	ubiquitin-conjugating enzyme E2J 2
chr4	156028607	156033464	+	156030874	156033464	A5SS&ES	0.33	50	50	ENSMUST00000150846.8	ENSMUSG00000023286.17	Ube2j2	chr4	protein_coding	ubiquitin-conjugating enzyme E2J 2
chr4	156028716	156030712	+	156029091	156030712	A5SS&ES	0.25	50	50	ENSMUST00000150846.8	ENSMUSG00000023286.17	Ube2j2	chr4	protein_coding	ubiquitin-conjugating enzyme E2J 2
chr4	156028716	156030712	+	156028470	156030712	A5SS	0.25	50	50	ENSMUST00000105583.9	ENSMUSG00000023286.17	Ube2j2	chr4	protein_coding	ubiquitin-conjugating enzyme E2J 2
chr4	156040017	156041538	+	156040017	156040825	3pMXE	0.5	50	50	ENSMUST00000151892.2	ENSMUSG00000023286.17	Ube2j2	chr4	protein_coding	ubiquitin-conjugating enzyme E2J 2
chr4	156040017	156041538	+	156040905	156041538	5pMXE	0.5	50	50	ENSMUST00000124092.2	ENSMUSG00000023286.17	Ube2j2	chr4	protein_coding	ubiquitin-conjugating enzyme E2J 2
chr4	156049588	156050323	+	156049588;156050159	156050051;156050323	ES	0.5	50	50	ENSMUST00000024338.5	ENSMUSG00000023571.5	C1qtnf12	chr4	protein_coding	C1q and tumor necrosis factor related 12
chr4	156085240	156086930	+	156085240	156093244	A3SS	0.5	50	50	ENSMUST00000105579.8	ENSMUSG00000029076.15	Sdf4	chr4	protein_coding	stromal cell derived factor 4
chr4	156078026	156080646	+	156077791	156080646	A5SS	0.5	50	50	ENSMUST00000105579.8	ENSMUSG00000029076.15	Sdf4	chr4	protein_coding	stromal cell derived factor 4
chr4	156099466	156099757	+	156099466	156099843	A3SS	0.5	50	50	ENSMUST00000030952.6	ENSMUSG00000029075.7	Tnfrsf4	chr4	protein_coding	tumor necrosis factor receptor superfamily, member 4
chr4	156111343	156112932	-	156108294	156112932	A3SS	0.5	50	50	ENSMUST00000151836.8	ENSMUSG00000087381.9	Gm16008	chr4	lncRNA	predicted gene 16008
chr4	156112506	156112952	+	156112506;156112880	156112678;156112952	ES	0.5	50	50	ENSMUST00000103173.10	ENSMUSG00000041954.19	Tnfrsf18	chr4	protein_coding	tumor necrosis factor receptor superfamily, member 18
chr4	156111087	156111773	+	156110994	156111773	A5SS	0.5	50	50	ENSMUST00000103173.10	ENSMUSG00000041954.19	Tnfrsf18	chr4	protein_coding	tumor necrosis factor receptor superfamily, member 18
chr4	156112506	156112952	+	156112880	156112952	A5SS	0.5	50	50	ENSMUST00000141260.8	ENSMUSG00000041954.19	Tnfrsf18	chr4	protein_coding	tumor necrosis factor receptor superfamily, member 18
chr4	156112506	156112952	+	156112506	156112678	A3SS	0.5	50	50	ENSMUST00000122001.3	ENSMUSG00000041954.19	Tnfrsf18	chr4	protein_coding	tumor necrosis factor receptor superfamily, member 18
chr4	156127644	156129176	-	156127644;156128254	156128083;156129176	ES	0.5	50	50	ENSMUST00000051509.15	ENSMUSG00000029074.15	Ttll10	chr4	protein_coding	tubulin tyrosine ligase-like family, member 10
chr4	156131939	156132749	-	156131939;156132100	156132020;156132749	ES	0.5	50	50	ENSMUST00000051509.15	ENSMUSG00000029074.15	Ttll10	chr4	protein_coding	tubulin tyrosine ligase-like family, member 10
chr4	156134723	156143453	-	156134723	156135217	5pMXE	0.25	50	50	ENSMUST00000051509.15	ENSMUSG00000029074.15	Ttll10	chr4	protein_coding	tubulin tyrosine ligase-like family, member 10
chr4	156134723	156143576	-	156134723	156135217	5pMXE	0.25	50	50	ENSMUST00000051509.15	ENSMUSG00000029074.15	Ttll10	chr4	protein_coding	tubulin tyrosine ligase-like family, member 10
chr4	156132100	156132359	-	156132100	156132749	A5SS	0.33	50	50	ENSMUST00000051509.15	ENSMUSG00000029074.15	Ttll10	chr4	protein_coding	tubulin tyrosine ligase-like family, member 10
chr4	156134723	156134825	-	156134723	156135217	A5SS	0.25	50	50	ENSMUST00000051509.15	ENSMUSG00000029074.15	Ttll10	chr4	protein_coding	tubulin tyrosine ligase-like family, member 10
chr4	156132100	156134658	-	156132100;156133161	156132749;156134658	ES	0.5	50	50	ENSMUST00000184348.8	ENSMUSG00000029074.15	Ttll10	chr4	protein_coding	tubulin tyrosine ligase-like family, member 10
chr4	156134723	156134825	-	156134723	156143576	A5SS	0.25	50	50	ENSMUST00000184348.8	ENSMUSG00000029074.15	Ttll10	chr4	protein_coding	tubulin tyrosine ligase-like family, member 10
chr4	156134723	156143453	-	156134723	156143576	A5SS	0.25	50	50	ENSMUST00000184348.8	ENSMUSG00000029074.15	Ttll10	chr4	protein_coding	tubulin tyrosine ligase-like family, member 10
chr4	156134723	156143453	-	156134723	156134825	5pMXE	0.25	50	50	ENSMUST00000184684.8	ENSMUSG00000029074.15	Ttll10	chr4	protein_coding	tubulin tyrosine ligase-like family, member 10
chr4	156131939;156133161	156132749;156134658	-	156131939;156132100	156132020;156134658	MXE	0.5	100	100	ENSMUST00000184684.8	ENSMUSG00000029074.15	Ttll10	chr4	protein_coding	tubulin tyrosine ligase-like family, member 10
chr4	156132100	156132359	-	156132100	156134658	A5SS	0.33	50	50	ENSMUST00000184684.8	ENSMUSG00000029074.15	Ttll10	chr4	protein_coding	tubulin tyrosine ligase-like family, member 10
chr4	156127644	156129176	-	156127644	156128083	5pMXE	0.33	50	50	ENSMUST00000184750.8	ENSMUSG00000029074.15	Ttll10	chr4	protein_coding	tubulin tyrosine ligase-like family, member 10
chr4	156127644	156129782	-	156127644	156128083	5pMXE	0.33	50	50	ENSMUST00000184750.8	ENSMUSG00000029074.15	Ttll10	chr4	protein_coding	tubulin tyrosine ligase-like family, member 10
chr4	156127644;156129347	156129176;156129782	-	156127644	156129782	cassetteExon	0.5	100	100	ENSMUST00000097731.8	ENSMUSG00000029074.15	Ttll10	chr4	protein_coding	tubulin tyrosine ligase-like family, member 10
chr4	156127644	156129782	-	156127644	156129176	5pMXE	0.33	50	50	ENSMUST00000183563.2	ENSMUSG00000029074.15	Ttll10	chr4	protein_coding	tubulin tyrosine ligase-like family, member 10
chr4	156203696	156206808	+	156203696;156206485	156206390;156206808	ES	0.5	50	50	ENSMUST00000072554.13	ENSMUSG00000059939.14	9430015G10Rik	chr4	protein_coding	RIKEN cDNA 9430015G10 gene
chr4	156198458;156201305	156200861;156201467	+	156198458	156201467	cassetteExon	0.5	100	100	ENSMUST00000072554.13	ENSMUSG00000059939.14	9430015G10Rik	chr4	protein_coding	RIKEN cDNA 9430015G10 gene
chr4	156198458;156201305	156201173;156201467	+	156198458	156201467	cassetteExon	0.5	100	100	ENSMUST00000072554.13	ENSMUSG00000059939.14	9430015G10Rik	chr4	protein_coding	RIKEN cDNA 9430015G10 gene
chr4	156194480	156198386	+	156194480	156198346	A3SS	0.5	50	50	ENSMUST00000072554.13	ENSMUSG00000059939.14	9430015G10Rik	chr4	protein_coding	RIKEN cDNA 9430015G10 gene
chr4	156194630	156198346	+	156194480	156198346	A5SS	0.5	50	50	ENSMUST00000072554.13	ENSMUSG00000059939.14	9430015G10Rik	chr4	protein_coding	RIKEN cDNA 9430015G10 gene
chr4	156203696	156206808	+	156203696	156206390	A3SS	0.5	50	50	ENSMUST00000125786.8	ENSMUSG00000059939.14	9430015G10Rik	chr4	protein_coding	RIKEN cDNA 9430015G10 gene
chr4	156198458	156200861	+	156198458	156201173	A3SS	0.33	50	50	ENSMUST00000141802.8	ENSMUSG00000059939.14	9430015G10Rik	chr4	protein_coding	RIKEN cDNA 9430015G10 gene
chr4	156198458	156201467	+	156198458	156200861	3pMXE	0.33	50	50	ENSMUST00000154944.2	ENSMUSG00000059939.14	9430015G10Rik	chr4	protein_coding	RIKEN cDNA 9430015G10 gene
chr4	156251963	156253190	-	156251963;156253026	156253003;156253190	ES	0.5	50	50	ENSMUST00000154494.8	ENSMUSG00000041936.19	Agrn	chr4	protein_coding	agrin
chr4	156251963;156252266	156252234;156253003	-	156251963	156253003	cassetteExon	0.5	100	100	ENSMUST00000154494.8	ENSMUSG00000041936.19	Agrn	chr4	protein_coding	agrin
chr4	156269592	156279701	-	156269592	156270008	5pMXE	0.5	50	50	ENSMUST00000105574.9	ENSMUSG00000041936.19	Agrn	chr4	protein_coding	agrin
chr4	156253793;156254014	156254003;156254227	-	156253793	156254227	cassetteExon	0.5	100	100	ENSMUST00000105574.9	ENSMUSG00000041936.19	Agrn	chr4	protein_coding	agrin
chr4	156257587;156257839	156257753;156258000	-	156257587	156258000	cassetteExon	0.5	100	100	ENSMUST00000105574.9	ENSMUSG00000041936.19	Agrn	chr4	protein_coding	agrin
chr4	156250971	156257019	-	156256879	156257019	A3SS&ES	0.5	50	50	ENSMUST00000105574.9	ENSMUSG00000041936.19	Agrn	chr4	protein_coding	agrin
chr4	156251963	156252234	-	156251963	156253190	A5SS	0.33	50	50	ENSMUST00000105574.9	ENSMUSG00000041936.19	Agrn	chr4	protein_coding	agrin
chr4	156251963	156253190	-	156251963;156253026	156252234;156253190	ES	0.5	50	50	ENSMUST00000181062.8	ENSMUSG00000041936.19	Agrn	chr4	protein_coding	agrin
chr4	156251963	156253003	-	156251963	156252234	A5SS	0.33	50	50	ENSMUST00000181062.8	ENSMUSG00000041936.19	Agrn	chr4	protein_coding	agrin
chr4	156306398	156306708	-	156306473	156306708	A3SS&ES	0.5	50	50	ENSMUST00000219227.2	ENSMUSG00000078485.5	Plekhn1	chr4	protein_coding	pleckstrin homology domain containing, family N member 1
chr4	156306935	156307097	-	156306846	156307097	A3SS	0.33	50	50	ENSMUST00000219227.2	ENSMUSG00000078485.5	Plekhn1	chr4	protein_coding	pleckstrin homology domain containing, family N member 1
chr4	156306938	156307097	-	156306846	156307097	A3SS	0.33	50	50	ENSMUST00000219227.2	ENSMUSG00000078485.5	Plekhn1	chr4	protein_coding	pleckstrin homology domain containing, family N member 1
chr4	156306938	156307097	-	156306935	156307097	A3SS	0.33	50	50	ENSMUST00000218699.2	ENSMUSG00000078485.5	Plekhn1	chr4	protein_coding	pleckstrin homology domain containing, family N member 1
chr4	156314719	156315358	-	156314719;156315143	156314962;156315358	ES	0.5	50	50	ENSMUST00000105569.5	ENSMUSG00002076083.1	Klhl17	chr4	protein_coding	--
chr4	156315143	156315371	-	156315143	156315358	A5SS	0.5	50	50	ENSMUST00000105569.5	ENSMUSG00002076083.1	Klhl17	chr4	protein_coding	--
chr4	156317202	156317665	-	156317202	156317681	A5SS	0.33	50	50	ENSMUST00000105569.5	ENSMUSG00002076083.1	Klhl17	chr4	protein_coding	--
chr4	156317202	156317748	-	156317202	156317681	A5SS	0.33	50	50	ENSMUST00000105569.5	ENSMUSG00002076083.1	Klhl17	chr4	protein_coding	--
chr4	156318519	156318903	-	156318519	156319113	A5SS	0.5	50	50	ENSMUST00000105569.5	ENSMUSG00002076083.1	Klhl17	chr4	protein_coding	--
chr4	156314719	156315358	-	156315143	156315358	A3SS	0.5	50	50	ENSMUST00020183325.1	ENSMUSG00002076083.1	Klhl17	chr4	protein_coding	--
chr4	156317202	156317665	-	156317202	156317748	A5SS	0.33	50	50	ENSMUST00020183325.1	ENSMUSG00002076083.1	Klhl17	chr4	protein_coding	--
chr4	156314719	156315358	-	156314719	156314962	5pMXE	0.5	50	50	ENSMUST00020182958.1	ENSMUSG00002076083.1	Klhl17	chr4	protein_coding	--
chr4	156339607	156340628	-	156339607	156340231	5pMXE	0.33	50	50	ENSMUST00000179919.3	ENSMUSG00000096351.3	Samd11	chr4	protein_coding	sterile alpha motif domain containing 11
chr4	156334873	156336403	-	156334957	156336403	A3SS	0.5	50	50	ENSMUST00000179919.3	ENSMUSG00000096351.3	Samd11	chr4	protein_coding	sterile alpha motif domain containing 11
chr4	156332655	156332804	-	156332655	156332794	A5SS	0.5	50	50	ENSMUST00000179919.3	ENSMUSG00000096351.3	Samd11	chr4	protein_coding	sterile alpha motif domain containing 11
chr4	156336537	156336684	-	156336537	156336654	A5SS	0.5	50	50	ENSMUST00000179919.3	ENSMUSG00000096351.3	Samd11	chr4	protein_coding	sterile alpha motif domain containing 11
chr4	156339607	156340353	-	156339607	156340231	A5SS	0.33	50	50	ENSMUST00000179919.3	ENSMUSG00000096351.3	Samd11	chr4	protein_coding	sterile alpha motif domain containing 11
chr4	156339607	156340628	-	156339607	156340353	5pMXE	0.33	50	50	ENSMUST00000218788.2	ENSMUSG00000096351.3	Samd11	chr4	protein_coding	sterile alpha motif domain containing 11
chr4	156687012	156690451	+	156687012;156689328	156689199;156690451	ES	0.5	50	50	ENSMUST00000189559.7	ENSMUSG00000057021.14	Vmn2r129	chr4	protein_coding	vomeronasal 2, receptor 129
chr4	156683682;156685801	156685519;156686209	+	156683682	156686209	cassetteExon	0.5	100	100	ENSMUST00000189559.7	ENSMUSG00000057021.14	Vmn2r129	chr4	protein_coding	vomeronasal 2, receptor 129
chr4	156687012;156688078	156687854;156689199	+	156687012	156689199	cassetteExon	0.5	100	100	ENSMUST00000189559.7	ENSMUSG00000057021.14	Vmn2r129	chr4	protein_coding	vomeronasal 2, receptor 129
chr4	156687012	156687854	+	156687012	156690451	A3SS	0.33	50	50	ENSMUST00000074107.13	ENSMUSG00000057021.14	Vmn2r129	chr4	protein_coding	vomeronasal 2, receptor 129
chr5	3320515	3323983	+	3320515	3320634	3pMXE	0.5	50	50	ENSMUST00000200222.2	ENSMUSG00000106658.2	Gm36548	chr5	lncRNA	predicted gene, 36548
chr5	3393788	3394119	+	3391574	3394119	A5SS	0.33	50	50	ENSMUST00000199156.2	ENSMUSG00000040274.12	Cdk6	chr5	protein_coding	cyclin-dependent kinase 6
chr5	3393971	3394119	+	3391574	3394119	A5SS	0.33	50	50	ENSMUST00000199156.2	ENSMUSG00000040274.12	Cdk6	chr5	protein_coding	cyclin-dependent kinase 6
chr5	3393971	3394119	+	3393788	3394119	A5SS	0.33	50	50	ENSMUST00000197607.2	ENSMUSG00000040274.12	Cdk6	chr5	protein_coding	cyclin-dependent kinase 6
chr5	3609698;3611089	3611039;3614241	+	3609698	3614241	cassetteExon	0.5	100	100	ENSMUST00000197082.5	ENSMUSG00000058503.12	Fam133b	chr5	protein_coding	family with sequence similarity 133, member B
chr5	3608693	3609138	+	3608693	3609097	A3SS	0.5	50	50	ENSMUST00000197082.5	ENSMUSG00000058503.12	Fam133b	chr5	protein_coding	family with sequence similarity 133, member B
chr5	3611089	3614237	+	3611089	3614241	A3SS	0.5	50	50	ENSMUST00000115527.8	ENSMUSG00000058503.12	Fam133b	chr5	protein_coding	family with sequence similarity 133, member B
chr5	3609698	3614241	+	3609698	3611039	A3SS&ES	0.5	50	50	ENSMUST00000196499.2	ENSMUSG00000058503.12	Fam133b	chr5	protein_coding	family with sequence similarity 133, member B
chr5	3627344	3630405	+	3627344	3630453	A3SS	0.33	50	50	ENSMUST00000147801.8	ENSMUSG00000008307.12	1700109H08Rik	chr5	protein_coding	RIKEN cDNA 1700109H08 gene
chr5	3630556	3632177	+	3630556	3632143	A3SS	0.5	50	50	ENSMUST00000147801.8	ENSMUSG00000008307.12	1700109H08Rik	chr5	protein_coding	RIKEN cDNA 1700109H08 gene
chr5	3627344	3630405	+	3627344	3634240	A3SS	0.33	50	50	ENSMUST00000125740.2	ENSMUSG00000008307.12	1700109H08Rik	chr5	protein_coding	RIKEN cDNA 1700109H08 gene
chr5	3627344	3630453	+	3627344	3634240	A3SS	0.33	50	50	ENSMUST00000125740.2	ENSMUSG00000008307.12	1700109H08Rik	chr5	protein_coding	RIKEN cDNA 1700109H08 gene
chr5	3632247	3634240	+	3627344	3634240	A5SS	0.5	50	50	ENSMUST00000125740.2	ENSMUSG00000008307.12	1700109H08Rik	chr5	protein_coding	RIKEN cDNA 1700109H08 gene
chr5	3641815	3645966	-	3641815;3645445	3645255;3645966	ES	0.5	50	50	ENSMUST00000042753.14	ENSMUSG00000040302.18	Rbm48	chr5	protein_coding	RNA binding motif protein 48
chr5	3642445	3645255	-	3641815	3645255	A3SS	0.5	50	50	ENSMUST00000042753.14	ENSMUSG00000040302.18	Rbm48	chr5	protein_coding	RNA binding motif protein 48
chr5	3656410;3657786	3657667;3659854	+	3656410	3659854	cassetteExon	0.5	100	100	ENSMUST00000006061.13	ENSMUSG00000005907.15	Pex1	chr5	protein_coding	peroxisomal biogenesis factor 1
chr5	3646366	3653232	+	3646517	3653232	A5SS	0.5	50	50	ENSMUST00000006061.13	ENSMUSG00000005907.15	Pex1	chr5	protein_coding	peroxisomal biogenesis factor 1
chr5	3659749	3659854	+	3656410	3659854	A5SS	0.33	50	50	ENSMUST00000006061.13	ENSMUSG00000005907.15	Pex1	chr5	protein_coding	peroxisomal biogenesis factor 1
chr5	3670811	3672233	+	3670765	3672233	A5SS	0.5	50	50	ENSMUST00000006061.13	ENSMUSG00000005907.15	Pex1	chr5	protein_coding	peroxisomal biogenesis factor 1
chr5	3659749	3659854	+	3657786	3659854	A5SS	0.33	50	50	ENSMUST00000121291.8	ENSMUSG00000005907.15	Pex1	chr5	protein_coding	peroxisomal biogenesis factor 1
chr5	3656410;3660288	3659854;3662881	+	3656410	3662881	cassetteExon	0.5	100	100	ENSMUST00000126545.2	ENSMUSG00000005907.15	Pex1	chr5	protein_coding	peroxisomal biogenesis factor 1
chr5	3656410	3657667	+	3656410	3662881	A3SS	0.33	50	50	ENSMUST00000126545.2	ENSMUSG00000005907.15	Pex1	chr5	protein_coding	peroxisomal biogenesis factor 1
chr5	3696909	3707143	-	3696909	3697380	5pMXE	0.5	50	50	ENSMUST00000007559.15	ENSMUSG00000007415.16	Gatad1	chr5	protein_coding	GATA zinc finger domain containing 1
chr5	3715333	3716837	+	3715333	3716795	A3SS	0.5	50	50	ENSMUST00000199959.5	ENSMUSG00000014529.10	Tmbim7	chr5	protein_coding	transmembrane BAX inhibitor motif containing 7
chr5	3719952	3720034	+	3719952	3720021	A3SS	0.5	50	50	ENSMUST00000199959.5	ENSMUSG00000014529.10	Tmbim7	chr5	protein_coding	transmembrane BAX inhibitor motif containing 7
chr5	3707526	3711759	+	3701280	3711759	A5SS	0.5	50	50	ENSMUST00000199959.5	ENSMUSG00000014529.10	Tmbim7	chr5	protein_coding	transmembrane BAX inhibitor motif containing 7
chr5	3711841	3714257	+	3712033	3714257	A5SS	0.5	50	50	ENSMUST00000199959.5	ENSMUSG00000014529.10	Tmbim7	chr5	protein_coding	transmembrane BAX inhibitor motif containing 7
chr5	3726326	3729661	+	3726326	3729017	3pMXE	0.5	50	50	ENSMUST00000014673.9	ENSMUSG00000014529.10	Tmbim7	chr5	protein_coding	transmembrane BAX inhibitor motif containing 7
chr5	3744893	3750356	-	3744875	3750356	A3SS	0.5	50	50	ENSMUST00000043551.11	ENSMUSG00000040351.12	Ankib1	chr5	protein_coding	ankyrin repeat and IBR domain containing 1
chr5	3822787	3845429	-	3822787	3852597	A5SS	0.5	50	50	ENSMUST00000043551.11	ENSMUSG00000040351.12	Ankib1	chr5	protein_coding	ankyrin repeat and IBR domain containing 1
chr5	3862857	3868527	+	3862857;3863194	3863051;3868527	ES	0.33	50	50	ENSMUST00000199845.5	ENSMUSG00000000600.16	Krit1	chr5	protein_coding	KRIT1, ankyrin repeat containing
chr5	3882226	3890874	+	3882226;3886894	3886778;3890874	ES	0.5	50	50	ENSMUST00000199845.5	ENSMUSG00000000600.16	Krit1	chr5	protein_coding	KRIT1, ankyrin repeat containing
chr5	3863194;3863419	3863272;3868527	+	3863194	3868527	cassetteExon	0.5	100	100	ENSMUST00000199845.5	ENSMUSG00000000600.16	Krit1	chr5	protein_coding	KRIT1, ankyrin repeat containing
chr5	3853483	3856465	+	3853483	3856419	A3SS	0.5	50	50	ENSMUST00000199845.5	ENSMUSG00000000600.16	Krit1	chr5	protein_coding	KRIT1, ankyrin repeat containing
chr5	3873785	3880606	+	3873785	3880604	A3SS	0.5	50	50	ENSMUST00000199845.5	ENSMUSG00000000600.16	Krit1	chr5	protein_coding	KRIT1, ankyrin repeat containing
chr5	3854426	3856419	+	3853483	3856419	A5SS	0.5	50	50	ENSMUST00000199845.5	ENSMUSG00000000600.16	Krit1	chr5	protein_coding	KRIT1, ankyrin repeat containing
chr5	3853598	3856465	+	3853483	3856465	A5SS	0.5	50	50	ENSMUST00000080085.9	ENSMUSG00000000600.16	Krit1	chr5	protein_coding	KRIT1, ankyrin repeat containing
chr5	3862857;3863419	3863051;3868527	+	3862857	3868527	cassetteExon	0.5	100	100	ENSMUST00000200386.5	ENSMUSG00000000600.16	Krit1	chr5	protein_coding	KRIT1, ankyrin repeat containing
chr5	3882226	3890874	+	3882226	3886778	A3SS&ES	0.5	50	50	ENSMUST00000200386.5	ENSMUSG00000000600.16	Krit1	chr5	protein_coding	KRIT1, ankyrin repeat containing
chr5	3862857	3868527	+	3863419	3868527	A5SS&ES	0.33	50	50	ENSMUST00000197742.2	ENSMUSG00000000600.16	Krit1	chr5	protein_coding	KRIT1, ankyrin repeat containing
chr5	3895290	3899632	+	3895446	3899632	A5SS	0.5	50	50	ENSMUST00000044039.2	ENSMUSG00000040367.3	Lrrd1	chr5	protein_coding	leucine rich repeats and death domain containing 1
chr5	3941897	3942809	-	3941897	3943875	A5SS	0.5	50	50	ENSMUST00000044746.5	ENSMUSG00000040429.7	Mterf1a	chr5	protein_coding	mitochondrial transcription termination factor 1a
chr5	4001432	4001690	+	3998896	4001690	A5SS	0.5	50	50	ENSMUST00000132058.2	ENSMUSG00000040407.19	Akap9	chr5	protein_coding	A kinase (PRKA) anchor protein (yotiao) 9
chr5	4001734	4004792	+	4001734;4004450	4004397;4004792	ES	0.5	50	50	ENSMUST00000143365.8	ENSMUSG00000040407.19	Akap9	chr5	protein_coding	A kinase (PRKA) anchor protein (yotiao) 9
chr5	4001734	4006157	+	4001734;4004962	4004792;4006157	ES	0.5	50	50	ENSMUST00000044492.10	ENSMUSG00000040407.19	Akap9	chr5	protein_coding	A kinase (PRKA) anchor protein (yotiao) 9
chr5	4115386	4115812	+	4115386	4115805	A3SS	0.5	50	50	ENSMUST00000044492.10	ENSMUSG00000040407.19	Akap9	chr5	protein_coding	A kinase (PRKA) anchor protein (yotiao) 9
chr5	4074166	4078374	+	4064079	4078374	A5SS	0.5	50	50	ENSMUST00000044492.10	ENSMUSG00000040407.19	Akap9	chr5	protein_coding	A kinase (PRKA) anchor protein (yotiao) 9
chr5	4114772	4115181	+	4114739	4115181	A5SS	0.5	50	50	ENSMUST00000044492.10	ENSMUSG00000040407.19	Akap9	chr5	protein_coding	A kinase (PRKA) anchor protein (yotiao) 9
chr5	4001734	4004397	+	4001734	4006157	A3SS	0.33	50	50	ENSMUST00000140977.8	ENSMUSG00000040407.19	Akap9	chr5	protein_coding	A kinase (PRKA) anchor protein (yotiao) 9
chr5	4001734	4006157	+	4004962	4006157	5pMXE	0.5	50	50	ENSMUST00000177448.2	ENSMUSG00000040407.19	Akap9	chr5	protein_coding	A kinase (PRKA) anchor protein (yotiao) 9
chr5	5299228	5423458	-	5299228	5315580	5pMXE	0.2	50	50	ENSMUST00000115451.8	ENSMUSG00000028926.16	Cdk14	chr5	protein_coding	cyclin-dependent kinase 14
chr5	5299228	5470069	-	5299228	5315580	5pMXE	0.2	50	50	ENSMUST00000115451.8	ENSMUSG00000028926.16	Cdk14	chr5	protein_coding	cyclin-dependent kinase 14
chr5	4982071	4999532	-	4972175	4999532	A3SS	0.5	50	50	ENSMUST00000115451.8	ENSMUSG00000028926.16	Cdk14	chr5	protein_coding	cyclin-dependent kinase 14
chr5	5234675	5245278	-	5185413	5245278	A3SS	0.5	50	50	ENSMUST00000115451.8	ENSMUSG00000028926.16	Cdk14	chr5	protein_coding	cyclin-dependent kinase 14
chr5	5299243	5315580	-	5299228	5315580	A3SS	0.5	50	50	ENSMUST00000115451.8	ENSMUSG00000028926.16	Cdk14	chr5	protein_coding	cyclin-dependent kinase 14
chr5	5299228	5315133	-	5299228	5315580	A5SS	0.2	50	50	ENSMUST00000115451.8	ENSMUSG00000028926.16	Cdk14	chr5	protein_coding	cyclin-dependent kinase 14
chr5	5299228	5315953	-	5299228	5315580	A5SS	0.2	50	50	ENSMUST00000115451.8	ENSMUSG00000028926.16	Cdk14	chr5	protein_coding	cyclin-dependent kinase 14
chr5	5349976	5423458	-	5299228	5423458	A3SS	0.5	50	50	ENSMUST00000030763.13	ENSMUSG00000028926.16	Cdk14	chr5	protein_coding	cyclin-dependent kinase 14
chr5	5299228	5315133	-	5299228	5423458	A5SS	0.25	50	50	ENSMUST00000030763.13	ENSMUSG00000028926.16	Cdk14	chr5	protein_coding	cyclin-dependent kinase 14
chr5	5299228	5315953	-	5299228	5423458	A5SS	0.25	50	50	ENSMUST00000030763.13	ENSMUSG00000028926.16	Cdk14	chr5	protein_coding	cyclin-dependent kinase 14
chr5	5299228	5315953	-	5299228	5315133	5pMXE	0.2	50	50	ENSMUST00000115450.8	ENSMUSG00000028926.16	Cdk14	chr5	protein_coding	cyclin-dependent kinase 14
chr5	5299228	5470069	-	5299228	5315133	5pMXE	0.2	50	50	ENSMUST00000115450.8	ENSMUSG00000028926.16	Cdk14	chr5	protein_coding	cyclin-dependent kinase 14
chr5	5299228	5470069	-	5299228	5315953	5pMXE	0.2	50	50	ENSMUST00000115452.8	ENSMUSG00000028926.16	Cdk14	chr5	protein_coding	cyclin-dependent kinase 14
chr5	5299228;5315722	5315580;5315953	-	5299228	5315953	cassetteExon	0.5	100	100	ENSMUST00000115452.8	ENSMUSG00000028926.16	Cdk14	chr5	protein_coding	cyclin-dependent kinase 14
chr5	5315722	5315953	-	5315722	5316168	A5SS	0.5	50	50	ENSMUST00000131392.8	ENSMUSG00000028926.16	Cdk14	chr5	protein_coding	cyclin-dependent kinase 14
chr5	5299228	5423458	-	5299228	5470069	A5SS	0.2	50	50	ENSMUST00000167567.2	ENSMUSG00000028926.16	Cdk14	chr5	protein_coding	cyclin-dependent kinase 14
chr5	5502067;5505990	5505897;5507285	-	5502067	5507285	cassetteExon	0.5	100	100	ENSMUST00000128151.8	ENSMUSG00000079666.9	Pttg1ip2	chr5	protein_coding	PTTG1IP family member 2
chr5	5516671;5525427	5525020;5528866	-	5516671	5528866	cassetteExon	0.5	100	100	ENSMUST00000115447.2	ENSMUSG00000079666.9	Pttg1ip2	chr5	protein_coding	PTTG1IP family member 2
chr5	5563251;5564376	5564232;5564765	-	5563251	5564765	cassetteExon	0.5	100	100	ENSMUST00000198303.5	ENSMUSG00000046798.15	Cldn12	chr5	protein_coding	claudin 12
chr5	5558454	5561071	-	5539595	5561071	A3SS	0.5	50	50	ENSMUST00000198303.5	ENSMUSG00000046798.15	Cldn12	chr5	protein_coding	claudin 12
chr5	5561194	5563162	-	5561122	5563162	A3SS	0.5	50	50	ENSMUST00000198303.5	ENSMUSG00000046798.15	Cldn12	chr5	protein_coding	claudin 12
chr5	5563223	5564765	-	5563251	5564765	A3SS	0.33	50	50	ENSMUST00000198303.5	ENSMUSG00000046798.15	Cldn12	chr5	protein_coding	claudin 12
chr5	5563251	5564628	-	5563251	5564765	A5SS	0.33	50	50	ENSMUST00000198303.5	ENSMUSG00000046798.15	Cldn12	chr5	protein_coding	claudin 12
chr5	5563223	5564765	-	5564376	5564765	A3SS&ES	0.33	50	50	ENSMUST00000179804.8	ENSMUSG00000046798.15	Cldn12	chr5	protein_coding	claudin 12
chr5	5563251	5564628	-	5563251	5564232	A5SS&ES	0.33	50	50	ENSMUST00000179804.8	ENSMUSG00000046798.15	Cldn12	chr5	protein_coding	claudin 12
chr5	5563251	5564765	-	5563251	5564232	5pMXE	0.33	50	50	ENSMUST00000134157.2	ENSMUSG00000046798.15	Cldn12	chr5	protein_coding	claudin 12
chr5	5596405	5605238	-	5596405;5598000	5597927;5605238	ES	0.33	50	50	ENSMUST00000115441.9	ENSMUSG00000040464.16	Gtpbp10	chr5	protein_coding	GTP-binding protein 10 (putative)
chr5	5605382	5607213	-	5605382;5606156	5606065;5607213	ES	0.25	50	50	ENSMUST00000115441.9	ENSMUSG00000040464.16	Gtpbp10	chr5	protein_coding	GTP-binding protein 10 (putative)
chr5	5598000;5604899	5604824;5605238	-	5598000	5605238	cassetteExon	0.5	100	100	ENSMUST00000115441.9	ENSMUSG00000040464.16	Gtpbp10	chr5	protein_coding	GTP-binding protein 10 (putative)
chr5	5605406	5606065	-	5605382	5606065	A3SS	0.33	50	50	ENSMUST00000115441.9	ENSMUSG00000040464.16	Gtpbp10	chr5	protein_coding	GTP-binding protein 10 (putative)
chr5	5606154	5607213	-	5606156	5607213	A3SS	0.25	50	50	ENSMUST00000115441.9	ENSMUSG00000040464.16	Gtpbp10	chr5	protein_coding	GTP-binding protein 10 (putative)
chr5	5596405;5605382	5605238;5607213	-	5596405;5598000	5597927;5607213	MXE	0.5	100	100	ENSMUST00000088842.11	ENSMUSG00000040464.16	Gtpbp10	chr5	protein_coding	GTP-binding protein 10 (putative)
chr5	5598000;5605382	5605238;5607213	-	5598000	5607213	cassetteExon	0.5	100	100	ENSMUST00000088842.11	ENSMUSG00000040464.16	Gtpbp10	chr5	protein_coding	GTP-binding protein 10 (putative)
chr5	5596405;5606154	5606065;5607213	-	5596405;5598000	5597927;5607213	MXE	0.5	100	100	ENSMUST00000088842.11	ENSMUSG00000040464.16	Gtpbp10	chr5	protein_coding	GTP-binding protein 10 (putative)
chr5	5596405;5606156	5606065;5607213	-	5596405;5598000	5597927;5607213	MXE	0.5	100	100	ENSMUST00000088842.11	ENSMUSG00000040464.16	Gtpbp10	chr5	protein_coding	GTP-binding protein 10 (putative)
chr5	5598000	5604824	-	5598000	5607213	A5SS	0.33	50	50	ENSMUST00000088842.11	ENSMUSG00000040464.16	Gtpbp10	chr5	protein_coding	GTP-binding protein 10 (putative)
chr5	5596405;5605382	5605238;5606065	-	5596405	5606065	cassetteExon	0.5	100	100	ENSMUST00000119521.8	ENSMUSG00000040464.16	Gtpbp10	chr5	protein_coding	GTP-binding protein 10 (putative)
chr5	5596405;5605382	5605238;5607213	-	5596405;5606156	5606065;5607213	MXE	0.5	100	100	ENSMUST00000119521.8	ENSMUSG00000040464.16	Gtpbp10	chr5	protein_coding	GTP-binding protein 10 (putative)
chr5	5596405;5605406	5605238;5606065	-	5596405	5606065	cassetteExon	0.5	100	100	ENSMUST00000119521.8	ENSMUSG00000040464.16	Gtpbp10	chr5	protein_coding	GTP-binding protein 10 (putative)
chr5	5605382	5607213	-	5606156	5607213	A3SS&ES	0.25	50	50	ENSMUST00000128887.8	ENSMUSG00000040464.16	Gtpbp10	chr5	protein_coding	GTP-binding protein 10 (putative)
chr5	5596405;5606154	5606065;5607213	-	5596405;5605382	5605238;5607213	MXE	0.5	100	100	ENSMUST00000126855.8	ENSMUSG00000040464.16	Gtpbp10	chr5	protein_coding	GTP-binding protein 10 (putative)
chr5	5605382;5606154	5606065;5607213	-	5605382	5607213	cassetteExon	0.5	100	100	ENSMUST00000126855.8	ENSMUSG00000040464.16	Gtpbp10	chr5	protein_coding	GTP-binding protein 10 (putative)
chr5	5604899	5605238	-	5596405	5605238	A3SS	0.33	50	50	ENSMUST00000126855.8	ENSMUSG00000040464.16	Gtpbp10	chr5	protein_coding	GTP-binding protein 10 (putative)
chr5	5598000	5607213	-	5598000	5605238	5pMXE	0.33	50	50	ENSMUST00000152984.8	ENSMUSG00000040464.16	Gtpbp10	chr5	protein_coding	GTP-binding protein 10 (putative)
chr5	5631366	5632442	-	5631366;5632008	5631904;5632442	ES	0.5	50	50	ENSMUST00000054865.13	ENSMUSG00000040473.16	Cfap69	chr5	protein_coding	cilia and flagella associated protein 69
chr5	5632528	5636356	-	5632528;5634848	5634651;5636356	ES	0.5	50	50	ENSMUST00000054865.13	ENSMUSG00000040473.16	Cfap69	chr5	protein_coding	cilia and flagella associated protein 69
chr5	5636432	5639120	-	5636432;5637278	5637141;5639120	ES	0.5	50	50	ENSMUST00000054865.13	ENSMUSG00000040473.16	Cfap69	chr5	protein_coding	cilia and flagella associated protein 69
chr5	5669215	5675750	-	5669215;5672043	5671920;5675750	ES	0.5	50	50	ENSMUST00000054865.13	ENSMUSG00000040473.16	Cfap69	chr5	protein_coding	cilia and flagella associated protein 69
chr5	5690227	5696936	-	5690227;5694500	5694424;5696936	ES	0.5	50	50	ENSMUST00000054865.13	ENSMUSG00000040473.16	Cfap69	chr5	protein_coding	cilia and flagella associated protein 69
chr5	5639213	5643772	-	5639312	5643772	A3SS	0.5	50	50	ENSMUST00000054865.13	ENSMUSG00000040473.16	Cfap69	chr5	protein_coding	cilia and flagella associated protein 69
chr5	5669069	5671465	-	5669069	5669167	A5SS&ES	0.5	50	50	ENSMUST00000054865.13	ENSMUSG00000040473.16	Cfap69	chr5	protein_coding	cilia and flagella associated protein 69
chr5	5707847	5713044	-	5707847	5713908	A5SS	0.5	50	50	ENSMUST00000054865.13	ENSMUSG00000040473.16	Cfap69	chr5	protein_coding	cilia and flagella associated protein 69
chr5	5654392	5663686	-	5637278	5663686	A3SS	0.5	50	50	ENSMUST00000196165.5	ENSMUSG00000040473.16	Cfap69	chr5	protein_coding	cilia and flagella associated protein 69
chr5	5636432	5639120	-	5636432	5637141	A5SS&ES	0.5	50	50	ENSMUST00000196165.5	ENSMUSG00000040473.16	Cfap69	chr5	protein_coding	cilia and flagella associated protein 69
chr5	5637278	5639120	-	5637278	5663686	A5SS	0.5	50	50	ENSMUST00000196165.5	ENSMUSG00000040473.16	Cfap69	chr5	protein_coding	cilia and flagella associated protein 69
chr5	5667385	5671920	-	5667385	5668948	A5SS&ES	0.5	50	50	ENSMUST00000199314.5	ENSMUSG00000040473.16	Cfap69	chr5	protein_coding	cilia and flagella associated protein 69
chr5	5636432;5637278	5637141;5663686	-	5636432;5654392	5639120;5663686	MXE	0.5	100	100	ENSMUST00000148347.8	ENSMUSG00000040473.16	Cfap69	chr5	protein_coding	cilia and flagella associated protein 69
chr5	5667385;5672043	5671920;5675750	-	5667385;5669215	5668948;5675750	MXE	0.5	100	100	ENSMUST00000132510.8	ENSMUSG00000040473.16	Cfap69	chr5	protein_coding	cilia and flagella associated protein 69
chr5	5667385;5669215	5668948;5671920	-	5667385	5671920	cassetteExon	0.5	100	100	ENSMUST00000061008.10	ENSMUSG00000040473.16	Cfap69	chr5	protein_coding	cilia and flagella associated protein 69
chr5	5718105	5725841	-	5723696	5725841	A3SS	0.5	50	50	ENSMUST00000115426.9	ENSMUSG00000015653.14	Steap2	chr5	protein_coding	six transmembrane epithelial antigen of prostate 2
chr5	5726005	5726952	-	5726005	5727317	A5SS	0.5	50	50	ENSMUST00000115426.9	ENSMUSG00000015653.14	Steap2	chr5	protein_coding	six transmembrane epithelial antigen of prostate 2
chr5	5733055	5743958	-	5733055	5733292	A5SS&ES	0.5	50	50	ENSMUST00000115426.9	ENSMUSG00000015653.14	Steap2	chr5	protein_coding	six transmembrane epithelial antigen of prostate 2
chr5	5733417	5743603	-	5733417	5744380	A5SS	0.25	50	50	ENSMUST00000115426.9	ENSMUSG00000015653.14	Steap2	chr5	protein_coding	six transmembrane epithelial antigen of prostate 2
chr5	5733417	5743958	-	5733417	5744380	A5SS	0.25	50	50	ENSMUST00000115426.9	ENSMUSG00000015653.14	Steap2	chr5	protein_coding	six transmembrane epithelial antigen of prostate 2
chr5	5733417	5744286	-	5733417	5744380	A5SS	0.25	50	50	ENSMUST00000115426.9	ENSMUSG00000015653.14	Steap2	chr5	protein_coding	six transmembrane epithelial antigen of prostate 2
chr5	5733055;5733417	5733292;5743958	-	5733055	5743958	cassetteExon	0.5	100	100	ENSMUST00000115427.8	ENSMUSG00000015653.14	Steap2	chr5	protein_coding	six transmembrane epithelial antigen of prostate 2
chr5	5733417	5744286	-	5733417	5743603	5pMXE	0.25	50	50	ENSMUST00000115425.9	ENSMUSG00000015653.14	Steap2	chr5	protein_coding	six transmembrane epithelial antigen of prostate 2
chr5	5733417	5743958	-	5733417	5743603	A5SS	0.25	50	50	ENSMUST00000115425.9	ENSMUSG00000015653.14	Steap2	chr5	protein_coding	six transmembrane epithelial antigen of prostate 2
chr5	5733417	5744286	-	5733417	5743958	5pMXE	0.25	50	50	ENSMUST00000015797.11	ENSMUSG00000015653.14	Steap2	chr5	protein_coding	six transmembrane epithelial antigen of prostate 2
chr5	5786673;5788896	5788750;5789796	-	5786673	5789796	cassetteExon	0.5	100	100	ENSMUST00000015796.9	ENSMUSG00000015652.10	Steap1	chr5	protein_coding	six transmembrane epithelial antigen of the prostate 1
chr5	7354194	7354457	+	7354194	7354756	A3SS	0.5	50	50	ENSMUST00000088796.3	ENSMUSG00000040514.7	Tex47	chr5	protein_coding	testis expressed 47
chr5	8106639	8107538	+	8096215	8107538	A5SS	0.5	50	50	ENSMUST00000088786.11	ENSMUSG00000003161.16	Sri	chr5	protein_coding	sorcin
chr5	8113000	8113260	+	8112427	8113260	A5SS	0.5	50	50	ENSMUST00000088786.11	ENSMUSG00000003161.16	Sri	chr5	protein_coding	sorcin
chr5	8142831	8157002	-	8142831;8145180	8145073;8157002	ES	0.33	50	50	ENSMUST00000088761.11	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8145180	8161895	-	8145180;8157019	8157002;8161895	ES	0.25	50	50	ENSMUST00000088761.11	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8132269;8136623	8136594;8142340	-	8132269	8142340	cassetteExon	0.5	100	100	ENSMUST00000088761.11	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8132269;8138068	8137982;8142340	-	8132269	8142340	cassetteExon	0.5	100	100	ENSMUST00000088761.11	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8132269;8140252	8140142;8142340	-	8132269	8142340	cassetteExon	0.5	100	100	ENSMUST00000088761.11	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8132269;8141422	8141365;8142340	-	8132269	8142340	cassetteExon	0.5	100	100	ENSMUST00000088761.11	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8142831;8145047	8144986;8157002	-	8142831;8145180	8145073;8157002	MXE	0.5	100	100	ENSMUST00000088761.11	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8142831;8145047	8144986;8161895	-	8142831;8157019	8145073;8161895	MXE	0.5	100	100	ENSMUST00000088761.11	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8274882	8282610	-	8217409	8282610	A3SS	0.5	50	50	ENSMUST00000088761.11	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8142831	8161895	-	8142831;8157019	8157002;8161895	ES	0.25	50	50	ENSMUST00000115386.8	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8132269;8136623	8136594;8137982	-	8132269	8137982	cassetteExon	0.5	100	100	ENSMUST00000115386.8	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8132269;8136623	8136594;8142340	-	8132269;8138068	8137982;8142340	MXE	0.5	100	100	ENSMUST00000115386.8	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8132269;8140252	8140142;8142340	-	8132269;8138068	8137982;8142340	MXE	0.5	100	100	ENSMUST00000115386.8	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8138068;8140252	8140142;8142340	-	8138068	8142340	cassetteExon	0.5	100	100	ENSMUST00000115386.8	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8132269;8141422	8141365;8142340	-	8132269;8138068	8137982;8142340	MXE	0.5	100	100	ENSMUST00000115386.8	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8142831;8145047	8144986;8157002	-	8142831	8157002	cassetteExon	0.5	100	100	ENSMUST00000115386.8	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8142831;8145047	8144986;8161895	-	8142831;8157019	8157002;8161895	MXE	0.5	100	100	ENSMUST00000115386.8	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8142831;8145180	8144986;8157002	-	8142831	8157002	cassetteExon	0.5	100	100	ENSMUST00000115386.8	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8142831;8145180	8144986;8161895	-	8142831;8157019	8157002;8161895	MXE	0.5	100	100	ENSMUST00000115386.8	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8142831;8145180	8145073;8161895	-	8142831;8157019	8157002;8161895	MXE	0.5	100	100	ENSMUST00000115386.8	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8132269;8136623	8136594;8140142	-	8132269	8140142	cassetteExon	0.5	100	100	ENSMUST00000115388.9	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8132269;8136623	8136594;8142340	-	8132269;8140252	8140142;8142340	MXE	0.5	100	100	ENSMUST00000115388.9	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8132269;8138068	8137982;8140142	-	8132269	8140142	cassetteExon	0.5	100	100	ENSMUST00000115388.9	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8132269;8141422	8141365;8142340	-	8132269;8140252	8140142;8142340	MXE	0.5	100	100	ENSMUST00000115388.9	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8142831;8145047	8144986;8161895	-	8142831	8161895	cassetteExon	0.5	100	100	ENSMUST00000115388.9	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8142831;8145180	8144986;8161895	-	8142831	8161895	cassetteExon	0.5	100	100	ENSMUST00000115388.9	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8142831;8145180	8145073;8161895	-	8142831	8161895	cassetteExon	0.5	100	100	ENSMUST00000115388.9	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8145047	8161895	-	8145180	8161895	A3SS	0.25	50	50	ENSMUST00000088744.12	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8142831	8145073	-	8142831	8144986	A5SS	0.25	50	50	ENSMUST00000088744.12	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8142831;8145180	8145073;8161895	-	8142831;8145047	8144986;8161895	MXE	0.5	100	100	ENSMUST00000197700.5	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8145047;8157019	8157002;8161895	-	8145047	8161895	cassetteExon	0.5	100	100	ENSMUST00000197700.5	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8132269;8136623	8136594;8142340	-	8132269;8141422	8141365;8142340	MXE	0.5	100	100	ENSMUST00000144241.8	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8136623	8142340	-	8136623;8140252	8140142;8142340	ES	0.2	50	50	ENSMUST00000154935.8	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8132269;8138068	8137982;8140142	-	8132269;8136623	8136594;8140142	MXE	0.5	100	100	ENSMUST00000154935.8	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8136623;8138068	8137982;8140142	-	8136623	8140142	cassetteExon	0.5	100	100	ENSMUST00000154935.8	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8132269;8138068	8137982;8142340	-	8132269;8140252	8136594;8142340	MXE	0.5	100	100	ENSMUST00000154935.8	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8136623;8138068	8137982;8142340	-	8136623;8140252	8140142;8142340	MXE	0.5	100	100	ENSMUST00000154935.8	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8132269;8141422	8141365;8142340	-	8132269;8140252	8136594;8142340	MXE	0.5	100	100	ENSMUST00000154935.8	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8145047	8157002	-	8145180	8157002	A3SS	0.33	50	50	ENSMUST00000154935.8	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8145047	8161895	-	8157019	8161895	A3SS&ES	0.25	50	50	ENSMUST00000154935.8	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8132269;8136623	8136594;8142340	-	8132269;8140252	8137982;8142340	MXE	0.5	100	100	ENSMUST00000153427.8	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8132269;8141422	8141365;8142340	-	8132269;8140252	8137982;8142340	MXE	0.5	100	100	ENSMUST00000153427.8	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8136623	8142340	-	8136623;8138068	8137982;8142340	ES	0.2	50	50	ENSMUST00000136524.8	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8132269;8140252	8140142;8142340	-	8132269;8138068	8136594;8142340	MXE	0.5	100	100	ENSMUST00000136524.8	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8132269;8141422	8141365;8142340	-	8132269;8138068	8136594;8142340	MXE	0.5	100	100	ENSMUST00000136524.8	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8142831;8145180	8145073;8161895	-	8142831;8157019	8144986;8161895	MXE	0.5	100	100	ENSMUST00000199853.2	ENSMUSG00000040537.18	Adam22	chr5	protein_coding	a disintegrin and metallopeptidase domain 22
chr5	8448162	8453080	-	8448162;8449812	8449688;8453080	ES	0.5	50	50	ENSMUST00000002368.16	ENSMUSG00000002297.17	Dbf4	chr5	protein_coding	DBF4 zinc finger
chr5	8448669	8449688	-	8448162	8449688	A3SS	0.5	50	50	ENSMUST00000002368.16	ENSMUSG00000002297.17	Dbf4	chr5	protein_coding	DBF4 zinc finger
chr5	8454916	8455802	-	8454913	8455802	A3SS	0.5	50	50	ENSMUST00000002368.16	ENSMUSG00000002297.17	Dbf4	chr5	protein_coding	DBF4 zinc finger
chr5	8470300	8471221	-	8462300	8471221	A3SS	0.5	50	50	ENSMUST00000002368.16	ENSMUSG00000002297.17	Dbf4	chr5	protein_coding	DBF4 zinc finger
chr5	8448162	8453080	-	8448162	8449688	5pMXE	0.5	50	50	ENSMUST00000168637.2	ENSMUSG00000002297.17	Dbf4	chr5	protein_coding	DBF4 zinc finger
chr5	8473039	8477408	+	8473039;8477267	8477196;8477408	ES	0.33	50	50	ENSMUST00000066921.10	ENSMUSG00000054099.12	Slc25a40	chr5	protein_coding	solute carrier family 25, member 40
chr5	8473039;8474887	8474797;8477196	+	8473039	8477196	cassetteExon	0.5	100	100	ENSMUST00000066921.10	ENSMUSG00000054099.12	Slc25a40	chr5	protein_coding	solute carrier family 25, member 40
chr5	8473039;8474887	8474797;8477408	+	8473039;8477267	8477196;8477408	MXE	0.5	100	100	ENSMUST00000066921.10	ENSMUSG00000054099.12	Slc25a40	chr5	protein_coding	solute carrier family 25, member 40
chr5	8478688	8480431	+	8478688	8480412	A3SS	0.5	50	50	ENSMUST00000066921.10	ENSMUSG00000054099.12	Slc25a40	chr5	protein_coding	solute carrier family 25, member 40
chr5	8474887	8477408	+	8474887;8477267	8477196;8477408	ES	0.33	50	50	ENSMUST00000197006.2	ENSMUSG00000054099.12	Slc25a40	chr5	protein_coding	solute carrier family 25, member 40
chr5	8473039;8474887	8474797;8477408	+	8473039	8477408	cassetteExon	0.5	100	100	ENSMUST00000170496.6	ENSMUSG00000054099.12	Slc25a40	chr5	protein_coding	solute carrier family 25, member 40
chr5	8473039	8477408	+	8474887	8477408	5pMXE	0.33	50	50	ENSMUST00000198792.2	ENSMUSG00000054099.12	Slc25a40	chr5	protein_coding	solute carrier family 25, member 40
chr5	8544905;8562407	8562261;8570859	-	8544905	8570859	cassetteExon	0.5	100	100	ENSMUST00000047485.15	ENSMUSG00000040570.15	Rundc3b	chr5	protein_coding	RUN domain containing 3B
chr5	8769883	8769991	+	8769086	8769991	A5SS	0.5	50	50	ENSMUST00000047753.5	ENSMUSG00000040584.9	Abcb1a	chr5	protein_coding	ATP-binding cassette, sub-family B (MDR/TAP), member 1A
chr5	8856170;8860615	8860558;8862655	+	8856170	8862655	cassetteExon	0.5	100	100	ENSMUST00000199955.5	ENSMUSG00000028970.10	Abcb1b	chr5	protein_coding	ATP-binding cassette, sub-family B (MDR/TAP), member 1B
chr5	8890498	8895748	+	8887794	8895748	A5SS	0.5	50	50	ENSMUST00000199955.5	ENSMUSG00000028970.10	Abcb1b	chr5	protein_coding	ATP-binding cassette, sub-family B (MDR/TAP), member 1B
chr5	8911630	8915750	+	8911630;8914261	8914115;8915750	ES	0.5	50	50	ENSMUST00000009058.10	ENSMUSG00000028970.10	Abcb1b	chr5	protein_coding	ATP-binding cassette, sub-family B (MDR/TAP), member 1B
chr5	8943907	8946573	+	8943907;8944164	8944088;8946573	ES	0.5	50	50	ENSMUST00000003717.13	ENSMUSG00000042476.13	Abcb4	chr5	protein_coding	ATP-binding cassette, sub-family B (MDR/TAP), member 4
chr5	8943907	8946573	+	8944164	8946573	5pMXE	0.5	50	50	ENSMUST00000196067.2	ENSMUSG00000042476.13	Abcb4	chr5	protein_coding	ATP-binding cassette, sub-family B (MDR/TAP), member 4
chr5	9028291	9031767	-	9028291	9033689	A5SS	0.5	50	50	ENSMUST00000003720.5	ENSMUSG00000003623.5	Crot	chr5	protein_coding	carnitine O-octanoyltransferase
chr5	9085184	9090746	+	9085184	9088349	A3SS	0.5	50	50	ENSMUST00000225021.2	ENSMUSG00000114430.2	Gm40264	chr5	lncRNA	predicted gene, 40264
chr5	9151395	9166480	+	9151395	9202967	A3SS	0.5	50	50	ENSMUST00000196029.5	ENSMUSG00000079659.6	Tmem243	chr5	protein_coding	transmembrane protein 243, mitochondrial
chr5	9163410	9166480	+	9151395	9166480	A5SS	0.5	50	50	ENSMUST00000115365.3	ENSMUSG00000079659.6	Tmem243	chr5	protein_coding	transmembrane protein 243, mitochondrial
chr5	9174527	9177957	-	9174527;9176749	9176540;9177957	ES	0.25	50	50	ENSMUST00000071921.13	ENSMUSG00000042508.17	Dmtf1	chr5	protein_coding	cyclin D binding myb-like transcription factor 1
chr5	9190480	9200376	-	9190480;9199022	9198900;9200376	ES	0.5	50	50	ENSMUST00000071921.13	ENSMUSG00000042508.17	Dmtf1	chr5	protein_coding	cyclin D binding myb-like transcription factor 1
chr5	9199022	9201798	-	9199022;9200492	9200376;9201798	ES	0.33	50	50	ENSMUST00000071921.13	ENSMUSG00000042508.17	Dmtf1	chr5	protein_coding	cyclin D binding myb-like transcription factor 1
chr5	9200492	9211614	-	9200492;9201918	9201798;9211614	ES	0.5	50	50	ENSMUST00000071921.13	ENSMUSG00000042508.17	Dmtf1	chr5	protein_coding	cyclin D binding myb-like transcription factor 1
chr5	9200492;9201172	9201088;9201798	-	9200492	9201798	cassetteExon	0.5	100	100	ENSMUST00000071921.13	ENSMUSG00000042508.17	Dmtf1	chr5	protein_coding	cyclin D binding myb-like transcription factor 1
chr5	9172461	9174442	-	9171937	9174442	A3SS	0.5	50	50	ENSMUST00000071921.13	ENSMUSG00000042508.17	Dmtf1	chr5	protein_coding	cyclin D binding myb-like transcription factor 1
chr5	9176643	9177957	-	9176749	9177957	A3SS	0.25	50	50	ENSMUST00000071921.13	ENSMUSG00000042508.17	Dmtf1	chr5	protein_coding	cyclin D binding myb-like transcription factor 1
chr5	9176802	9177957	-	9176749	9177957	A3SS	0.25	50	50	ENSMUST00000071921.13	ENSMUSG00000042508.17	Dmtf1	chr5	protein_coding	cyclin D binding myb-like transcription factor 1
chr5	9179437	9180368	-	9179376	9180368	A3SS	0.5	50	50	ENSMUST00000071921.13	ENSMUSG00000042508.17	Dmtf1	chr5	protein_coding	cyclin D binding myb-like transcription factor 1
chr5	9180652	9181276	-	9180477	9181276	A3SS	0.33	50	50	ENSMUST00000071921.13	ENSMUSG00000042508.17	Dmtf1	chr5	protein_coding	cyclin D binding myb-like transcription factor 1
chr5	9180693	9181276	-	9180477	9181276	A3SS	0.33	50	50	ENSMUST00000071921.13	ENSMUSG00000042508.17	Dmtf1	chr5	protein_coding	cyclin D binding myb-like transcription factor 1
chr5	9201918	9202877	-	9201918	9211614	A5SS	0.5	50	50	ENSMUST00000071921.13	ENSMUSG00000042508.17	Dmtf1	chr5	protein_coding	cyclin D binding myb-like transcription factor 1
chr5	9174527	9177957	-	9174527;9176643	9176540;9177957	ES	0.25	50	50	ENSMUST00000184159.8	ENSMUSG00000042508.17	Dmtf1	chr5	protein_coding	cyclin D binding myb-like transcription factor 1
chr5	9190480;9199022	9198900;9201798	-	9190480;9200492	9200376;9201798	MXE	0.5	100	100	ENSMUST00000184159.8	ENSMUSG00000042508.17	Dmtf1	chr5	protein_coding	cyclin D binding myb-like transcription factor 1
chr5	9176802	9177957	-	9176643	9177957	A3SS	0.25	50	50	ENSMUST00000184159.8	ENSMUSG00000042508.17	Dmtf1	chr5	protein_coding	cyclin D binding myb-like transcription factor 1
chr5	9174527;9176802	9176540;9177957	-	9174527	9177957	cassetteExon	0.5	100	100	ENSMUST00000095017.11	ENSMUSG00000042508.17	Dmtf1	chr5	protein_coding	cyclin D binding myb-like transcription factor 1
chr5	9180652	9181276	-	9180693	9181276	A3SS	0.33	50	50	ENSMUST00000184120.8	ENSMUSG00000042508.17	Dmtf1	chr5	protein_coding	cyclin D binding myb-like transcription factor 1
chr5	9190480;9200492	9200376;9211614	-	9190480;9201918	9198900;9211614	MXE	0.5	100	100	ENSMUST00000183973.8	ENSMUSG00000042508.17	Dmtf1	chr5	protein_coding	cyclin D binding myb-like transcription factor 1
chr5	9199022;9200492	9200376;9211614	-	9199022;9201918	9201798;9211614	MXE	0.5	100	100	ENSMUST00000183973.8	ENSMUSG00000042508.17	Dmtf1	chr5	protein_coding	cyclin D binding myb-like transcription factor 1
chr5	9201172	9201798	-	9199022	9201798	A3SS	0.33	50	50	ENSMUST00000183973.8	ENSMUSG00000042508.17	Dmtf1	chr5	protein_coding	cyclin D binding myb-like transcription factor 1
chr5	9174527	9177957	-	9174527	9176540	5pMXE	0.5	50	50	ENSMUST00000184370.2	ENSMUSG00000042508.17	Dmtf1	chr5	protein_coding	cyclin D binding myb-like transcription factor 1
chr5	9200492	9201088	-	9200492	9211614	A5SS	0.33	50	50	ENSMUST00000184372.8	ENSMUSG00000042508.17	Dmtf1	chr5	protein_coding	cyclin D binding myb-like transcription factor 1
chr5	9200492	9211614	-	9200492	9201798	5pMXE	0.33	50	50	ENSMUST00000183525.2	ENSMUSG00000042508.17	Dmtf1	chr5	protein_coding	cyclin D binding myb-like transcription factor 1
chr5	9190480	9200376	-	9199022	9200376	3pMXE	0.5	50	50	ENSMUST00000185193.8	ENSMUSG00000042508.17	Dmtf1	chr5	protein_coding	cyclin D binding myb-like transcription factor 1
chr5	9199022	9201798	-	9200492	9201798	3pMXE	0.33	50	50	ENSMUST00000185100.2	ENSMUSG00000042508.17	Dmtf1	chr5	protein_coding	cyclin D binding myb-like transcription factor 1
chr5	9316456	9449181	+	9316456;9430398	9430278;9449181	ES	0.5	50	50	ENSMUST00000155764.8	ENSMUSG00000056004.17	Elapor2	chr5	protein_coding	endosome-lysosome associated apoptosis and autophagy regulator family member 2
chr5	9487843	9490693	+	9487843	9490725	A3SS	0.33	50	50	ENSMUST00000155764.8	ENSMUSG00000056004.17	Elapor2	chr5	protein_coding	endosome-lysosome associated apoptosis and autophagy regulator family member 2
chr5	9487843	9490720	+	9487843	9490725	A3SS	0.33	50	50	ENSMUST00000155764.8	ENSMUSG00000056004.17	Elapor2	chr5	protein_coding	endosome-lysosome associated apoptosis and autophagy regulator family member 2
chr5	9460697	9467985	+	9460731	9467985	A5SS	0.5	50	50	ENSMUST00000155764.8	ENSMUSG00000056004.17	Elapor2	chr5	protein_coding	endosome-lysosome associated apoptosis and autophagy regulator family member 2
chr5	9487843	9490720	+	9487843	9490693	A3SS	0.33	50	50	ENSMUST00000152095.8	ENSMUSG00000056004.17	Elapor2	chr5	protein_coding	endosome-lysosome associated apoptosis and autophagy regulator family member 2
chr5	9460731	9467985	+	9460731	9529196	A3SS	0.5	50	50	ENSMUST00000115348.9	ENSMUSG00000056004.17	Elapor2	chr5	protein_coding	endosome-lysosome associated apoptosis and autophagy regulator family member 2
chr5	9513034	9529196	+	9460731	9529196	A5SS	0.5	50	50	ENSMUST00000115348.9	ENSMUSG00000056004.17	Elapor2	chr5	protein_coding	endosome-lysosome associated apoptosis and autophagy regulator family member 2
chr5	10284042	10285767	+	10284042	10286582	A3SS	0.5	50	50	ENSMUST00000190891.7	ENSMUSG00000073226.10	Gm10482	chr5	lncRNA	predicted gene 10482
chr5	10299167	10352347	+	10299167	10393584	A3SS	0.5	50	50	ENSMUST00000198581.2	ENSMUSG00000105157.2	Gm31831	chr5	lncRNA	predicted gene, 31831
chr5	10916143	10917164	+	10915053	10917164	A5SS	0.5	50	50	ENSMUST00000095015.11	ENSMUSG00000091422.9	Gm6455	chr5	lncRNA	predicted gene 6455
chr5	10997853	10998943	+	10997853	11091307	A3SS	0.5	50	50	ENSMUST00000168945.9	ENSMUSG00000095710.8	Gm8871	chr5	protein_coding	predicted pseudogene 8871
chr5	11090186	11091307	+	10997853	11091307	A5SS	0.5	50	50	ENSMUST00000168945.9	ENSMUSG00000095710.8	Gm8871	chr5	protein_coding	predicted pseudogene 8871
chr5	11807619	11819188	-	11794220	11819188	A3SS	0.5	50	50	ENSMUST00000185360.3	ENSMUSG00000099391.3	1700003C15Rik	chr5	lncRNA	RIKEN cDNA 1700003C15 gene
chr5	12603189	12609295	+	12603189	12613116	A3SS	0.5	50	50	ENSMUST00000030868.11	ENSMUSG00000040254.12	Sema3d	chr5	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
chr5	12626242	12627579	+	12623860	12627579	A5SS	0.5	50	50	ENSMUST00000030868.11	ENSMUSG00000040254.12	Sema3d	chr5	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
chr5	13341544	13358743	+	13341544	13449843	A3SS	0.5	50	50	ENSMUST00000195907.5	ENSMUSG00000028883.20	Sema3a	chr5	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
chr5	13523485	13544610	+	13523485	13566171	A3SS	0.5	50	50	ENSMUST00000195907.5	ENSMUSG00000028883.20	Sema3a	chr5	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
chr5	13447049	13449843	+	13341544	13449843	A5SS	0.2	50	50	ENSMUST00000195907.5	ENSMUSG00000028883.20	Sema3a	chr5	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
chr5	13448756	13449843	+	13341544	13449843	A5SS	0.2	50	50	ENSMUST00000195907.5	ENSMUSG00000028883.20	Sema3a	chr5	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
chr5	13449102	13449843	+	13341544	13449843	A5SS	0.2	50	50	ENSMUST00000195907.5	ENSMUSG00000028883.20	Sema3a	chr5	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
chr5	13449334	13449843	+	13341544	13449843	A5SS	0.2	50	50	ENSMUST00000195907.5	ENSMUSG00000028883.20	Sema3a	chr5	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
chr5	13448756	13449843	+	13447049	13449843	A5SS	0.2	50	50	ENSMUST00000095012.11	ENSMUSG00000028883.20	Sema3a	chr5	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
chr5	13449102	13449843	+	13447049	13449843	A5SS	0.2	50	50	ENSMUST00000095012.11	ENSMUSG00000028883.20	Sema3a	chr5	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
chr5	13449334	13449843	+	13447049	13449843	A5SS	0.2	50	50	ENSMUST00000095012.11	ENSMUSG00000028883.20	Sema3a	chr5	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
chr5	13449102	13449843	+	13448756	13449843	A5SS	0.2	50	50	ENSMUST00000125629.8	ENSMUSG00000028883.20	Sema3a	chr5	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
chr5	13449334	13449843	+	13448756	13449843	A5SS	0.2	50	50	ENSMUST00000125629.8	ENSMUSG00000028883.20	Sema3a	chr5	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
chr5	13449334	13449843	+	13449102	13449843	A5SS	0.2	50	50	ENSMUST00000137798.10	ENSMUSG00000028883.20	Sema3a	chr5	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
chr5	14825458	14838412	+	14825458;14828579	14828553;14838412	ES	0.5	50	50	ENSMUST00000182407.8	ENSMUSG00000061601.16	Pclo	chr5	protein_coding	piccolo (presynaptic cytomatrix protein)
chr5	14764612	14768832	+	14764612	14768871	A3SS	0.5	50	50	ENSMUST00000182407.8	ENSMUSG00000061601.16	Pclo	chr5	protein_coding	piccolo (presynaptic cytomatrix protein)
chr5	14731924	14762431	+	14732401	14762431	A5SS	0.5	50	50	ENSMUST00000182407.8	ENSMUSG00000061601.16	Pclo	chr5	protein_coding	piccolo (presynaptic cytomatrix protein)
chr5	14764465	14773538	-	14756226	14773538	A3SS	0.5	50	50	ENSMUST00000182753.2	ENSMUSG00000098233.2	Gm26954	chr5	lncRNA	predicted gene, 26954
chr5	15678172	15683764	+	15678172	15681166	3pMXE	0.33	50	50	ENSMUST00000196145.5	ENSMUSG00000106004.5	Gm43391	chr5	lncRNA	predicted gene 43391
chr5	15678172	15680276	+	15678172	15681166	A3SS	0.33	50	50	ENSMUST00000196145.5	ENSMUSG00000106004.5	Gm43391	chr5	lncRNA	predicted gene 43391
chr5	15675375	15678026	+	15669214	15678026	A5SS	0.5	50	50	ENSMUST00000196145.5	ENSMUSG00000106004.5	Gm43391	chr5	lncRNA	predicted gene 43391
chr5	15678172	15680276	+	15678172	15683764	A3SS	0.33	50	50	ENSMUST00000197796.2	ENSMUSG00000106004.5	Gm43391	chr5	lncRNA	predicted gene 43391
chr5	15730931	15733921	+	15730931	15860832	A3SS	0.5	50	50	ENSMUST00000178227.6	ENSMUSG00000094230.6	Gm21847	chr5	lncRNA	predicted gene, 21847
chr5	15728127	15730785	+	15721561	15730785	A5SS	0.5	50	50	ENSMUST00000178227.6	ENSMUSG00000094230.6	Gm21847	chr5	lncRNA	predicted gene, 21847
chr5	16075207	16088590	-	16075207;16080327	16079973;16088590	ES	0.5	50	50	ENSMUST00000198907.5	ENSMUSG00000105185.5	4930519H02Rik	chr5	lncRNA	RIKEN cDNA 4930519H02 gene
chr5	16525156;16527593	16527537;16531310	+	16525156	16531310	cassetteExon	0.5	100	100	ENSMUST00000167946.9	ENSMUSG00000040118.16	Cacna2d1	chr5	protein_coding	calcium channel, voltage-dependent, alpha2/delta subunit 1
chr5	16230863	16293146	+	16230863	16367991	A3SS	0.5	50	50	ENSMUST00000167946.9	ENSMUSG00000040118.16	Cacna2d1	chr5	protein_coding	calcium channel, voltage-dependent, alpha2/delta subunit 1
chr5	16525156	16531325	+	16525156	16531310	A3SS	0.33	50	50	ENSMUST00000167946.9	ENSMUSG00000040118.16	Cacna2d1	chr5	protein_coding	calcium channel, voltage-dependent, alpha2/delta subunit 1
chr5	16545781	16547681	+	16545781;16547008	16546988;16547681	ES	0.5	50	50	ENSMUST00000101581.10	ENSMUSG00000040118.16	Cacna2d1	chr5	protein_coding	calcium channel, voltage-dependent, alpha2/delta subunit 1
chr5	16525156	16531325	+	16525156	16527537	A3SS&ES	0.33	50	50	ENSMUST00000039370.14	ENSMUSG00000040118.16	Cacna2d1	chr5	protein_coding	calcium channel, voltage-dependent, alpha2/delta subunit 1
chr5	16758642	16758899	+	16758642	16758871	A3SS	0.5	50	50	ENSMUST00000195957.5	ENSMUSG00000028864.8	Hgf	chr5	protein_coding	hepatocyte growth factor
chr5	16771859	16777505	+	16771859	16777490	A3SS	0.5	50	50	ENSMUST00000195957.5	ENSMUSG00000028864.8	Hgf	chr5	protein_coding	hepatocyte growth factor
chr5	17868037	17875454	+	17868037	17875448	A3SS	0.5	50	50	ENSMUST00000030568.14	ENSMUSG00000028780.14	Sema3c	chr5	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
chr5	17781968	17858706	+	17781968	17875448	A3SS	0.5	50	50	ENSMUST00000170181.8	ENSMUSG00000028780.14	Sema3c	chr5	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
chr5	17868037	17875448	+	17781968	17875448	A5SS	0.5	50	50	ENSMUST00000170181.8	ENSMUSG00000028780.14	Sema3c	chr5	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
chr5	18034547	18093709	-	18034547	18054655	5pMXE	0.33	50	50	ENSMUST00000170051.8	ENSMUSG00000002944.16	Cd36	chr5	protein_coding	CD36 molecule
chr5	18034547;18040669	18040616;18054655	-	18034547	18054655	cassetteExon	0.5	100	100	ENSMUST00000170051.8	ENSMUSG00000002944.16	Cd36	chr5	protein_coding	CD36 molecule
chr5	18033979	18034454	-	18033982	18034454	A3SS	0.5	50	50	ENSMUST00000170051.8	ENSMUSG00000002944.16	Cd36	chr5	protein_coding	CD36 molecule
chr5	18034547	18054655	-	18034547	18040616	5pMXE	0.33	50	50	ENSMUST00000082367.13	ENSMUSG00000002944.16	Cd36	chr5	protein_coding	CD36 molecule
chr5	18034547	18093709	-	18034547	18040616	5pMXE	0.33	50	50	ENSMUST00000082367.13	ENSMUSG00000002944.16	Cd36	chr5	protein_coding	CD36 molecule
chr5	18034547	18093709	-	18034547;18040669	18040616;18093709	ES	0.5	50	50	ENSMUST00000169095.6	ENSMUSG00000002944.16	Cd36	chr5	protein_coding	CD36 molecule
chr5	18040669	18054655	-	18040669	18093709	A5SS	0.5	50	50	ENSMUST00000169095.6	ENSMUSG00000002944.16	Cd36	chr5	protein_coding	CD36 molecule
chr5	19408923	19415226	-	19408923;19412170	19412083;19415226	ES	0.5	50	50	ENSMUST00000180594.6	ENSMUSG00000097626.6	4921504A21Rik	chr5	lncRNA	RIKEN cDNA 4921504A21 gene
chr5	20739524	20755205	+	20739524;20748624	20748583;20755205	ES	0.33	50	50	ENSMUST00000197354.5	ENSMUSG00000040003.19	Magi2	chr5	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 2
chr5	20856191;20866350	20866240;20907068	+	20856191	20907068	cassetteExon	0.5	100	100	ENSMUST00000197354.5	ENSMUSG00000040003.19	Magi2	chr5	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 2
chr5	20856191;20866350	20866262;20907068	+	20856191	20907068	cassetteExon	0.5	100	100	ENSMUST00000197354.5	ENSMUSG00000040003.19	Magi2	chr5	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 2
chr5	19883767	19983338	+	19883767	20270550	A3SS	0.5	50	50	ENSMUST00000197354.5	ENSMUSG00000040003.19	Magi2	chr5	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 2
chr5	20113011	20270550	+	19883767	20270550	A5SS	0.33	50	50	ENSMUST00000197354.5	ENSMUSG00000040003.19	Magi2	chr5	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 2
chr5	20204616	20270550	+	19883767	20270550	A5SS	0.33	50	50	ENSMUST00000197354.5	ENSMUSG00000040003.19	Magi2	chr5	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 2
chr5	20407727	20420317	+	20400231	20420317	A5SS	0.5	50	50	ENSMUST00000197354.5	ENSMUSG00000040003.19	Magi2	chr5	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 2
chr5	20433242	20433370	+	20420527	20433370	A5SS	0.5	50	50	ENSMUST00000197354.5	ENSMUSG00000040003.19	Magi2	chr5	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 2
chr5	20738529	20739335	+	20733318	20739335	A5SS	0.5	50	50	ENSMUST00000197354.5	ENSMUSG00000040003.19	Magi2	chr5	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 2
chr5	20739518	20748583	+	20739524	20748583	A5SS	0.5	50	50	ENSMUST00000197354.5	ENSMUSG00000040003.19	Magi2	chr5	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 2
chr5	20739518	20755205	+	20748624	20755205	A5SS&ES	0.33	50	50	ENSMUST00000197354.5	ENSMUSG00000040003.19	Magi2	chr5	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 2
chr5	20906758	20907068	+	20856191	20907068	A5SS	0.33	50	50	ENSMUST00000197354.5	ENSMUSG00000040003.19	Magi2	chr5	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 2
chr5	20856191	20866240	+	20856191	20866262	A3SS	0.33	50	50	ENSMUST00000088516.10	ENSMUSG00000040003.19	Magi2	chr5	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 2
chr5	20906758	20907068	+	20866350	20907068	A5SS	0.33	50	50	ENSMUST00000088516.10	ENSMUSG00000040003.19	Magi2	chr5	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 2
chr5	20739518	20755205	+	20739524	20755205	A5SS	0.33	50	50	ENSMUST00000197443.5	ENSMUSG00000040003.19	Magi2	chr5	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 2
chr5	20113011;20204616	20204440;20270550	+	20113011	20270550	cassetteExon	0.5	100	100	ENSMUST00000101558.10	ENSMUSG00000040003.19	Magi2	chr5	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 2
chr5	20739518;20748624	20748583;20755205	+	20739518	20755205	cassetteExon	0.5	100	100	ENSMUST00000208219.2	ENSMUSG00000040003.19	Magi2	chr5	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 2
chr5	20739524	20755205	+	20748624	20755205	A5SS&ES	0.33	50	50	ENSMUST00000207284.2	ENSMUSG00000040003.19	Magi2	chr5	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 2
chr5	21007064	21010653	-	21007064;21008348	21008183;21010653	ES	0.5	50	50	ENSMUST00000118174.8	ENSMUSG00000039987.16	Phtf2	chr5	protein_coding	putative homeodomain transcription factor 2
chr5	21012471;21017991	21017939;21018238	-	21012471	21018238	cassetteExon	0.5	100	100	ENSMUST00000118174.8	ENSMUSG00000039987.16	Phtf2	chr5	protein_coding	putative homeodomain transcription factor 2
chr5	20969468	20970756	-	20969307	20970756	A3SS	0.5	50	50	ENSMUST00000118174.8	ENSMUSG00000039987.16	Phtf2	chr5	protein_coding	putative homeodomain transcription factor 2
chr5	20987445	20994627	-	20987489	20994627	A3SS	0.5	50	50	ENSMUST00000118174.8	ENSMUSG00000039987.16	Phtf2	chr5	protein_coding	putative homeodomain transcription factor 2
chr5	21018294	21060120	-	20999479	21060120	A3SS	0.5	50	50	ENSMUST00000133784.8	ENSMUSG00000039987.16	Phtf2	chr5	protein_coding	putative homeodomain transcription factor 2
chr5	20999479	21006900	-	20999479	21060120	A5SS	0.5	50	50	ENSMUST00000133784.8	ENSMUSG00000039987.16	Phtf2	chr5	protein_coding	putative homeodomain transcription factor 2
chr5	21132728	21150278	-	21132728	21156255	A5SS	0.5	50	50	ENSMUST00000036489.10	ENSMUSG00000039968.10	Rsbn1l	chr5	protein_coding	round spermatid basic protein 1-like
chr5	21216742	21220709	-	21216742;21219763	21219692;21220709	ES	0.5	50	50	ENSMUST00000030556.8	ENSMUSG00000028771.14	Ptpn12	chr5	protein_coding	protein tyrosine phosphatase, non-receptor type 12
chr5	21227092	21260647	-	21227092;21234882	21234774;21260647	ES	0.5	50	50	ENSMUST00000030556.8	ENSMUSG00000028771.14	Ptpn12	chr5	protein_coding	protein tyrosine phosphatase, non-receptor type 12
chr5	21214561	21216683	-	21214582	21216683	A3SS	0.5	50	50	ENSMUST00000030556.8	ENSMUSG00000028771.14	Ptpn12	chr5	protein_coding	protein tyrosine phosphatase, non-receptor type 12
chr5	21426293	21431242	+	21426293;21427437	21427388;21431242	ES	0.33	50	50	ENSMUST00000197522.5	ENSMUSG00000039934.13	Gsap	chr5	protein_coding	gamma-secretase activating protein
chr5	21451998	21455937	+	21451998;21455831	21455739;21455937	ES	0.5	50	50	ENSMUST00000197522.5	ENSMUSG00000039934.13	Gsap	chr5	protein_coding	gamma-secretase activating protein
chr5	21427437;21430725	21430561;21431242	+	21427437	21431242	cassetteExon	0.5	100	100	ENSMUST00000197522.5	ENSMUSG00000039934.13	Gsap	chr5	protein_coding	gamma-secretase activating protein
chr5	21391457	21392366	+	21391457	21399398	A3SS	0.5	50	50	ENSMUST00000197522.5	ENSMUSG00000039934.13	Gsap	chr5	protein_coding	gamma-secretase activating protein
chr5	21495142	21519852	+	21495142	21495536	3pMXE	0.5	50	50	ENSMUST00000198014.5	ENSMUSG00000039934.13	Gsap	chr5	protein_coding	gamma-secretase activating protein
chr5	21478041	21483043	+	21478041	21492675	A3SS	0.5	50	50	ENSMUST00000198014.5	ENSMUSG00000039934.13	Gsap	chr5	protein_coding	gamma-secretase activating protein
chr5	21486600	21492675	+	21478041	21492675	A5SS	0.5	50	50	ENSMUST00000198014.5	ENSMUSG00000039934.13	Gsap	chr5	protein_coding	gamma-secretase activating protein
chr5	21426293	21427388	+	21426293	21433022	A3SS	0.33	50	50	ENSMUST00000198071.5	ENSMUSG00000039934.13	Gsap	chr5	protein_coding	gamma-secretase activating protein
chr5	21426293	21431242	+	21426293	21433022	A3SS	0.33	50	50	ENSMUST00000198071.5	ENSMUSG00000039934.13	Gsap	chr5	protein_coding	gamma-secretase activating protein
chr5	21431831	21433022	+	21426293	21433022	A5SS	0.5	50	50	ENSMUST00000198071.5	ENSMUSG00000039934.13	Gsap	chr5	protein_coding	gamma-secretase activating protein
chr5	21430725	21431242	+	21426293	21431242	A5SS	0.33	50	50	ENSMUST00000195969.5	ENSMUSG00000039934.13	Gsap	chr5	protein_coding	gamma-secretase activating protein
chr5	21495142	21519852	+	21495142;21495710	21495536;21519852	ES	0.5	50	50	ENSMUST00000198930.2	ENSMUSG00000039934.13	Gsap	chr5	protein_coding	gamma-secretase activating protein
chr5	21535747	21535958	-	21535747	21538018	A5SS	0.5	50	50	ENSMUST00000115245.8	ENSMUSG00000064280.15	Ccdc146	chr5	protein_coding	coiled-coil domain containing 146
chr5	21639782	21643698	+	21638781	21643698	A5SS	0.5	50	50	ENSMUST00000056045.5	ENSMUSG00000047221.6	Fam185a	chr5	protein_coding	family with sequence similarity 185, member A
chr5	21728915;21729550	21729452;21748658	-	21728915	21748658	cassetteExon	0.5	100	100	ENSMUST00000051358.11	ENSMUSG00000048520.17	Fbxl13	chr5	protein_coding	F-box and leucine-rich repeat protein 13
chr5	21724411	21727108	-	21705561	21727108	A3SS	0.5	50	50	ENSMUST00000051358.11	ENSMUSG00000048520.17	Fbxl13	chr5	protein_coding	F-box and leucine-rich repeat protein 13
chr5	21786612	21786960	-	21761857	21786960	A3SS	0.5	50	50	ENSMUST00000051358.11	ENSMUSG00000048520.17	Fbxl13	chr5	protein_coding	F-box and leucine-rich repeat protein 13
chr5	21790291	21808648	-	21790291	21819648	A5SS	0.5	50	50	ENSMUST00000051358.11	ENSMUSG00000048520.17	Fbxl13	chr5	protein_coding	F-box and leucine-rich repeat protein 13
chr5	21748717	21765398	+	21748717	21755898	3pMXE	0.5	50	50	ENSMUST00000199277.2	ENSMUSG00000039883.6	Lrrc17	chr5	protein_coding	leucine rich repeat containing 17
chr5	21851233	21852306	+	21851233	21853660	A3SS	0.33	50	50	ENSMUST00000148873.8	ENSMUSG00000038525.17	Armc10	chr5	protein_coding	armadillo repeat containing 10
chr5	21851233	21853618	+	21851233	21853660	A3SS	0.33	50	50	ENSMUST00000148873.8	ENSMUSG00000038525.17	Armc10	chr5	protein_coding	armadillo repeat containing 10
chr5	21851233;21852446	21852306;21853618	+	21851233	21853618	cassetteExon	0.5	100	100	ENSMUST00000072896.13	ENSMUSG00000038525.17	Armc10	chr5	protein_coding	armadillo repeat containing 10
chr5	21888463	21906203	-	21888463	21905973	A5SS	0.5	50	50	ENSMUST00000115217.8	ENSMUSG00000044968.17	Napepld	chr5	protein_coding	N-acyl phosphatidylethanolamine phospholipase D
chr5	21961673	21961796	+	21961673	21961813	A3SS	0.5	50	50	ENSMUST00000030882.12	ENSMUSG00000029017.14	Pmpcb	chr5	protein_coding	peptidase (mitochondrial processing) beta
chr5	21943465	21943867	+	21942274	21943867	A5SS	0.5	50	50	ENSMUST00000030882.12	ENSMUSG00000029017.14	Pmpcb	chr5	protein_coding	peptidase (mitochondrial processing) beta
chr5	21988146	21989987	-	21988235	21989987	A3SS	0.5	50	50	ENSMUST00000030771.12	ENSMUSG00000029014.15	Dnajc2	chr5	protein_coding	DnaJ heat shock protein family (Hsp40) member C2
chr5	22019052	22020666	-	22019052;22020002	22019895;22020666	ES	0.5	50	50	ENSMUST00000115176.8	ENSMUSG00000029015.10	Slc26a5	chr5	protein_coding	solute carrier family 26, member 5
chr5	22020758	22024680	-	22020758;22022006	22021937;22024680	ES	0.5	50	50	ENSMUST00000115176.8	ENSMUSG00000029015.10	Slc26a5	chr5	protein_coding	solute carrier family 26, member 5
chr5	22024786	22026027	-	22024786;22025406	22025311;22026027	ES	0.5	50	50	ENSMUST00000115176.8	ENSMUSG00000029015.10	Slc26a5	chr5	protein_coding	solute carrier family 26, member 5
chr5	22043045;22045674	22045564;22051221	-	22043045	22051221	cassetteExon	0.5	100	100	ENSMUST00000115176.8	ENSMUSG00000029015.10	Slc26a5	chr5	protein_coding	solute carrier family 26, member 5
chr5	22024786;22026104	22026027;22026993	-	22024786	22026993	cassetteExon	0.5	100	100	ENSMUST00000142888.8	ENSMUSG00000029015.10	Slc26a5	chr5	protein_coding	solute carrier family 26, member 5
chr5	22024786	22025311	-	22024786	22026993	A5SS	0.33	50	50	ENSMUST00000142888.8	ENSMUSG00000029015.10	Slc26a5	chr5	protein_coding	solute carrier family 26, member 5
chr5	22024786	22026027	-	22024786	22025311	5pMXE	0.33	50	50	ENSMUST00000150012.2	ENSMUSG00000029015.10	Slc26a5	chr5	protein_coding	solute carrier family 26, member 5
chr5	22090567	22100987	-	22090567;22096565	22096560;22100987	ES	0.25	50	50	ENSMUST00000161356.8	ENSMUSG00000042453.15	Reln	chr5	protein_coding	reelin
chr5	22308462	22333613	-	22308462;22311103	22311007;22333613	ES	0.5	50	50	ENSMUST00000161356.8	ENSMUSG00000042453.15	Reln	chr5	protein_coding	reelin
chr5	22096695	22100987	-	22096565	22100987	A3SS	0.25	50	50	ENSMUST00000161356.8	ENSMUSG00000042453.15	Reln	chr5	protein_coding	reelin
chr5	22100231	22100987	-	22096565	22100987	A3SS	0.25	50	50	ENSMUST00000161356.8	ENSMUSG00000042453.15	Reln	chr5	protein_coding	reelin
chr5	22549100	22549178	-	22492001	22549178	A3SS	0.5	50	50	ENSMUST00000161356.8	ENSMUSG00000042453.15	Reln	chr5	protein_coding	reelin
chr5	22090567	22100987	-	22090567;22096695	22096560;22100987	ES	0.25	50	50	ENSMUST00000160791.2	ENSMUSG00000042453.15	Reln	chr5	protein_coding	reelin
chr5	22100231	22100987	-	22096695	22100987	A3SS	0.25	50	50	ENSMUST00000160791.2	ENSMUSG00000042453.15	Reln	chr5	protein_coding	reelin
chr5	22100231	22100987	-	22090567	22100987	A3SS	0.25	50	50	ENSMUST00000062372.14	ENSMUSG00000042453.15	Reln	chr5	protein_coding	reelin
chr5	22751596;22752551	22752439;22752922	-	22751596	22752922	cassetteExon	0.5	100	100	ENSMUST00000135906.8	ENSMUSG00000029012.12	Orc5	chr5	protein_coding	origin recognition complex, subunit 5
chr5	22733693	22734153	-	22731581	22734153	A3SS	0.5	50	50	ENSMUST00000135906.8	ENSMUSG00000029012.12	Orc5	chr5	protein_coding	origin recognition complex, subunit 5
chr5	22751502	22752922	-	22751596	22752922	A3SS	0.33	50	50	ENSMUST00000135906.8	ENSMUSG00000029012.12	Orc5	chr5	protein_coding	origin recognition complex, subunit 5
chr5	22753014	22754400	-	22753014	22755190	A5SS	0.5	50	50	ENSMUST00000135906.8	ENSMUSG00000029012.12	Orc5	chr5	protein_coding	origin recognition complex, subunit 5
chr5	22752551	22752922	-	22751502	22752922	A3SS	0.33	50	50	ENSMUST00000142987.8	ENSMUSG00000029012.12	Orc5	chr5	protein_coding	origin recognition complex, subunit 5
chr5	22787480	22899678	+	22787480;22868728	22868670;22899678	ES	0.33	50	50	ENSMUST00000195898.5	ENSMUSG00000097207.8	6030443J06Rik	chr5	lncRNA	RIKEN cDNA 6030443J06 gene
chr5	22899888	23010868	+	22899888	22905900	3pMXE	0.5	50	50	ENSMUST00000195898.5	ENSMUSG00000097207.8	6030443J06Rik	chr5	lncRNA	RIKEN cDNA 6030443J06 gene
chr5	22758835	22758985	+	22758835	22787401	A3SS	0.5	50	50	ENSMUST00000195898.5	ENSMUSG00000097207.8	6030443J06Rik	chr5	lncRNA	RIKEN cDNA 6030443J06 gene
chr5	22868728	22895705	+	22868728	22899678	A3SS	0.5	50	50	ENSMUST00000195898.5	ENSMUSG00000097207.8	6030443J06Rik	chr5	lncRNA	RIKEN cDNA 6030443J06 gene
chr5	22898931	22899678	+	22868728	22899678	A5SS	0.33	50	50	ENSMUST00000195898.5	ENSMUSG00000097207.8	6030443J06Rik	chr5	lncRNA	RIKEN cDNA 6030443J06 gene
chr5	22898931	22899678	+	22787480	22899678	A5SS	0.33	50	50	ENSMUST00000181209.2	ENSMUSG00000097207.8	6030443J06Rik	chr5	lncRNA	RIKEN cDNA 6030443J06 gene
chr5	23307646	23478333	+	23307646;23426910	23426863;23478333	ES	0.5	50	50	ENSMUST00000197992.2	ENSMUSG00000106379.2	Lhfpl3	chr5	protein_coding	lipoma HMGIC fusion partner-like 3
chr5	23305647	23307410	+	22951623	23307410	A5SS	0.5	50	50	ENSMUST00000197992.2	ENSMUSG00000106379.2	Lhfpl3	chr5	protein_coding	lipoma HMGIC fusion partner-like 3
chr5	23616119	23638208	-	23600353	23638208	A3SS	0.33	50	50	ENSMUST00000185943.2	ENSMUSG00000073147.4	5031425E22Rik	chr5	lncRNA	RIKEN cDNA 5031425E22 gene
chr5	23628341	23638208	-	23600353	23638208	A3SS	0.33	50	50	ENSMUST00000185943.2	ENSMUSG00000073147.4	5031425E22Rik	chr5	lncRNA	RIKEN cDNA 5031425E22 gene
chr5	23628341	23638208	-	23616119	23638208	A3SS	0.5	50	50	ENSMUST00000188328.2	ENSMUSG00000073147.4	5031425E22Rik	chr5	lncRNA	RIKEN cDNA 5031425E22 gene
chr5	23683742	23687400	+	23683742;23683981	23683851;23687400	ES	0.33	50	50	ENSMUST00000196889.5	ENSMUSG00000029004.16	Kmt2e	chr5	protein_coding	lysine (K)-specific methyltransferase 2E
chr5	23639781;23651596	23651524;23655150	+	23639781	23655150	cassetteExon	0.5	100	100	ENSMUST00000196889.5	ENSMUSG00000029004.16	Kmt2e	chr5	protein_coding	lysine (K)-specific methyltransferase 2E
chr5	23683981;23686324	23686207;23687400	+	23683981	23687400	cassetteExon	0.5	100	100	ENSMUST00000196889.5	ENSMUSG00000029004.16	Kmt2e	chr5	protein_coding	lysine (K)-specific methyltransferase 2E
chr5	23691398;23696611	23696445;23697266	+	23691398	23697266	cassetteExon	0.5	100	100	ENSMUST00000094962.9	ENSMUSG00000029004.16	Kmt2e	chr5	protein_coding	lysine (K)-specific methyltransferase 2E
chr5	23703292;23704000	23703886;23704280	+	23703292	23704280	cassetteExon	0.5	100	100	ENSMUST00000094962.9	ENSMUSG00000029004.16	Kmt2e	chr5	protein_coding	lysine (K)-specific methyltransferase 2E
chr5	23701498	23702537	+	23702220	23702537	A5SS&ES	0.5	50	50	ENSMUST00000094962.9	ENSMUSG00000029004.16	Kmt2e	chr5	protein_coding	lysine (K)-specific methyltransferase 2E
chr5	23686324	23687400	+	23683742	23687400	A5SS	0.33	50	50	ENSMUST00000200330.2	ENSMUSG00000029004.16	Kmt2e	chr5	protein_coding	lysine (K)-specific methyltransferase 2E
chr5	23730743	23732895	-	23730743;23731813	23731788;23732895	ES	0.5	50	50	ENSMUST00000088392.9	ENSMUSG00000062604.12	Srpk2	chr5	protein_coding	serine/arginine-rich protein specific kinase 2
chr5	23770263	23829051	-	23770263	23821325	5pMXE	0.33	50	50	ENSMUST00000088392.9	ENSMUSG00000062604.12	Srpk2	chr5	protein_coding	serine/arginine-rich protein specific kinase 2
chr5	23770263	23880718	-	23770263	23821325	5pMXE	0.33	50	50	ENSMUST00000088392.9	ENSMUSG00000062604.12	Srpk2	chr5	protein_coding	serine/arginine-rich protein specific kinase 2
chr5	23770263;23829124	23829051;23880718	-	23770263	23880718	cassetteExon	0.5	100	100	ENSMUST00000196929.5	ENSMUSG00000062604.12	Srpk2	chr5	protein_coding	serine/arginine-rich protein specific kinase 2
chr5	23834475	23880718	-	23770263	23880718	A3SS	0.33	50	50	ENSMUST00000196929.5	ENSMUSG00000062604.12	Srpk2	chr5	protein_coding	serine/arginine-rich protein specific kinase 2
chr5	23880772	23880856	-	23880772	23881312	A5SS	0.5	50	50	ENSMUST00000196929.5	ENSMUSG00000062604.12	Srpk2	chr5	protein_coding	serine/arginine-rich protein specific kinase 2
chr5	23834475	23880718	-	23829124	23880718	A3SS	0.33	50	50	ENSMUST00000196388.5	ENSMUSG00000062604.12	Srpk2	chr5	protein_coding	serine/arginine-rich protein specific kinase 2
chr5	23821388;23834475	23834330;23889377	-	23821388	23889377	cassetteExon	0.5	100	100	ENSMUST00000197985.5	ENSMUSG00000062604.12	Srpk2	chr5	protein_coding	serine/arginine-rich protein specific kinase 2
chr5	23770263;23829124	23829051;23880718	-	23770263;23834475	23821325;23880718	MXE	0.5	100	100	ENSMUST00000198661.5	ENSMUSG00000062604.12	Srpk2	chr5	protein_coding	serine/arginine-rich protein specific kinase 2
chr5	23834475	23880718	-	23834475	23889377	A5SS	0.5	50	50	ENSMUST00000198549.2	ENSMUSG00000062604.12	Srpk2	chr5	protein_coding	serine/arginine-rich protein specific kinase 2
chr5	23905471	23915364	-	23905454	23915364	A3SS	0.33	50	50	ENSMUST00000198461.2	ENSMUSG00000105987.5	AI506816	chr5	lncRNA	expressed sequence AI506816
chr5	23908347	23915364	-	23905454	23915364	A3SS	0.33	50	50	ENSMUST00000198461.2	ENSMUSG00000105987.5	AI506816	chr5	lncRNA	expressed sequence AI506816
chr5	23908347	23915364	-	23905471	23915364	A3SS	0.33	50	50	ENSMUST00000198984.5	ENSMUSG00000105987.5	AI506816	chr5	lncRNA	expressed sequence AI506816
chr5	23967472;23968349	23968332;23973766	-	23967472	23973766	cassetteExon	0.5	100	100	ENSMUST00000119946.8	ENSMUSG00000057541.15	Pus7	chr5	protein_coding	pseudouridylate synthase 7
chr5	23953920	23954803	-	23953841	23954803	A3SS	0.33	50	50	ENSMUST00000119946.8	ENSMUSG00000057541.15	Pus7	chr5	protein_coding	pseudouridylate synthase 7
chr5	23954613	23954803	-	23953841	23954803	A3SS	0.33	50	50	ENSMUST00000119946.8	ENSMUSG00000057541.15	Pus7	chr5	protein_coding	pseudouridylate synthase 7
chr5	23956397	23957260	-	23954864	23957260	A3SS	0.5	50	50	ENSMUST00000119946.8	ENSMUSG00000057541.15	Pus7	chr5	protein_coding	pseudouridylate synthase 7
chr5	23980734	23980882	-	23980768	23980882	A3SS	0.5	50	50	ENSMUST00000119946.8	ENSMUSG00000057541.15	Pus7	chr5	protein_coding	pseudouridylate synthase 7
chr5	23952918	23953754	-	23952918	23953681	A5SS	0.5	50	50	ENSMUST00000119946.8	ENSMUSG00000057541.15	Pus7	chr5	protein_coding	pseudouridylate synthase 7
chr5	23954864	23954997	-	23954864	23957260	A5SS	0.5	50	50	ENSMUST00000119946.8	ENSMUSG00000057541.15	Pus7	chr5	protein_coding	pseudouridylate synthase 7
chr5	23983497	23984111	-	23983497	23988510	A5SS	0.5	50	50	ENSMUST00000119946.8	ENSMUSG00000057541.15	Pus7	chr5	protein_coding	pseudouridylate synthase 7
chr5	23954613	23954803	-	23953920	23954803	A3SS	0.33	50	50	ENSMUST00000129848.8	ENSMUSG00000057541.15	Pus7	chr5	protein_coding	pseudouridylate synthase 7
chr5	24005834	24010569	+	24005834;24010481	24010308;24010569	ES	0.5	50	50	ENSMUST00000030852.13	ENSMUSG00000028999.16	Rint1	chr5	protein_coding	RAD50 interactor 1
chr5	23993333	23998556	+	23993333	23999301	A3SS	0.5	50	50	ENSMUST00000030852.13	ENSMUSG00000028999.16	Rint1	chr5	protein_coding	RAD50 interactor 1
chr5	23999485	24000668	+	23999485	24005593	A3SS	0.5	50	50	ENSMUST00000030852.13	ENSMUSG00000028999.16	Rint1	chr5	protein_coding	RAD50 interactor 1
chr5	24016840	24020650	+	24016907	24020650	A5SS	0.5	50	50	ENSMUST00000030852.13	ENSMUSG00000028999.16	Rint1	chr5	protein_coding	RAD50 interactor 1
chr5	24205017	24235477	-	24205017	24234912	5pMXE	0.33	50	50	ENSMUST00000101513.9	ENSMUSG00000028995.15	Fam126a	chr5	protein_coding	family with sequence similarity 126, member A
chr5	24205017;24234757	24234654;24234912	-	24205017	24234912	cassetteExon	0.5	100	100	ENSMUST00000101513.9	ENSMUSG00000028995.15	Fam126a	chr5	protein_coding	family with sequence similarity 126, member A
chr5	24170356	24184486	-	24120535	24184486	A3SS	0.33	50	50	ENSMUST00000101513.9	ENSMUSG00000028995.15	Fam126a	chr5	protein_coding	family with sequence similarity 126, member A
chr5	24171429	24184486	-	24120535	24184486	A3SS	0.33	50	50	ENSMUST00000101513.9	ENSMUSG00000028995.15	Fam126a	chr5	protein_coding	family with sequence similarity 126, member A
chr5	24193993	24196734	-	24193062	24196734	A3SS	0.5	50	50	ENSMUST00000101513.9	ENSMUSG00000028995.15	Fam126a	chr5	protein_coding	family with sequence similarity 126, member A
chr5	24120535	24120810	-	24120535	24184486	A5SS	0.5	50	50	ENSMUST00000101513.9	ENSMUSG00000028995.15	Fam126a	chr5	protein_coding	family with sequence similarity 126, member A
chr5	24196835	24235477	-	24196835;24205017	24204939;24235477	ES	0.5	50	50	ENSMUST00000030849.13	ENSMUSG00000028995.15	Fam126a	chr5	protein_coding	family with sequence similarity 126, member A
chr5	24170356;24171429	24171132;24184486	-	24170356	24184486	cassetteExon	0.5	100	100	ENSMUST00000030849.13	ENSMUSG00000028995.15	Fam126a	chr5	protein_coding	family with sequence similarity 126, member A
chr5	24205017	24234654	-	24205017	24235477	A5SS	0.33	50	50	ENSMUST00000030849.13	ENSMUSG00000028995.15	Fam126a	chr5	protein_coding	family with sequence similarity 126, member A
chr5	24196835	24235477	-	24196835	24204939	5pMXE	0.5	50	50	ENSMUST00000115109.2	ENSMUSG00000028995.15	Fam126a	chr5	protein_coding	family with sequence similarity 126, member A
chr5	24362089	24364445	+	24362089;24363634	24363537;24364445	ES	0.5	50	50	ENSMUST00000030841.10	ENSMUSG00000028986.13	Klhl7	chr5	protein_coding	kelch-like 7
chr5	24354363;24356838	24356717;24361888	+	24354363	24361888	cassetteExon	0.5	100	100	ENSMUST00000030841.10	ENSMUSG00000028986.13	Klhl7	chr5	protein_coding	kelch-like 7
chr5	24374388	24382998	+	24374388;24380528	24380452;24382998	ES	0.5	50	50	ENSMUST00000049887.13	ENSMUSG00000048439.16	Nupl2	chr5	protein_coding	nucleoporin like 2
chr5	24531775	24535909	-	24531775	24534163	5pMXE	0.5	50	50	ENSMUST00000115098.7	ENSMUSG00000038319.15	Kcnh2	chr5	protein_coding	potassium voltage-gated channel, subfamily H (eag-related), member 2
chr5	24530271	24530492	-	24530153	24530492	A3SS	0.5	50	50	ENSMUST00000115098.7	ENSMUSG00000038319.15	Kcnh2	chr5	protein_coding	potassium voltage-gated channel, subfamily H (eag-related), member 2
chr5	24588406	24588528	+	24588406	24588909	A3SS	0.5	50	50	ENSMUST00000115090.6	ENSMUSG00000028978.13	Nos3	chr5	protein_coding	nitric oxide synthase 3, endothelial cell
chr5	24577335	24582253	-	24577335	24588479	A5SS	0.5	50	50	ENSMUST00000146326.8	ENSMUSG00000086769.8	Gm15587	chr5	lncRNA	predicted gene 15587
chr5	24592541	24594779	-	24592541;24593441	24592687;24594779	ES	0.5	50	50	ENSMUST00000059401.7	ENSMUSG00000038295.15	Atg9b	chr5	protein_coding	autophagy related 9B
chr5	24592541	24592655	-	24592541	24592687	A5SS	0.33	50	50	ENSMUST00000059401.7	ENSMUSG00000038295.15	Atg9b	chr5	protein_coding	autophagy related 9B
chr5	24593441	24594779	-	24592541	24594779	A3SS	0.5	50	50	ENSMUST00000138716.8	ENSMUSG00000038295.15	Atg9b	chr5	protein_coding	autophagy related 9B
chr5	24592541	24592655	-	24592541	24594779	A5SS	0.33	50	50	ENSMUST00000138716.8	ENSMUSG00000038295.15	Atg9b	chr5	protein_coding	autophagy related 9B
chr5	24592541	24592687	-	24592541	24594779	A5SS	0.33	50	50	ENSMUST00000138716.8	ENSMUSG00000038295.15	Atg9b	chr5	protein_coding	autophagy related 9B
chr5	24598700	24599154	+	24598700	24599102	A3SS	0.5	50	50	ENSMUST00000138168.3	ENSMUSG00000028973.19	Abcb8	chr5	protein_coding	ATP-binding cassette, sub-family B (MDR/TAP), member 8
chr5	24612453	24614352	+	24612453;24613816	24613566;24614352	ES	0.5	50	50	ENSMUST00000115077.8	ENSMUSG00000028973.19	Abcb8	chr5	protein_coding	ATP-binding cassette, sub-family B (MDR/TAP), member 8
chr5	24605678	24614511	+	24605678	24605755	A3SS&ES	0.5	50	50	ENSMUST00000115077.8	ENSMUSG00000028973.19	Abcb8	chr5	protein_coding	ATP-binding cassette, sub-family B (MDR/TAP), member 8
chr5	24608176	24608626	+	24608176	24610813	A3SS	0.5	50	50	ENSMUST00000115077.8	ENSMUSG00000028973.19	Abcb8	chr5	protein_coding	ATP-binding cassette, sub-family B (MDR/TAP), member 8
chr5	24621435;24621682	24621535;24621953	+	24621435	24621953	cassetteExon	0.5	100	100	ENSMUST00000049346.10	ENSMUSG00000038276.13	Asic3	chr5	protein_coding	acid-sensing (proton-gated) ion channel 3
chr5	24622082	24622296	+	24622200	24622296	A5SS&ES	0.5	50	50	ENSMUST00000049346.10	ENSMUSG00000038276.13	Asic3	chr5	protein_coding	acid-sensing (proton-gated) ion channel 3
chr5	24621435	24621953	+	24621682	24621953	5pMXE	0.5	50	50	ENSMUST00000198442.2	ENSMUSG00000038276.13	Asic3	chr5	protein_coding	acid-sensing (proton-gated) ion channel 3
chr5	24625803	24627330	-	24625803;24626048	24625953;24627330	ES	0.5	50	50	ENSMUST00000030814.11	ENSMUSG00000028969.11	Cdk5	chr5	protein_coding	cyclin-dependent kinase 5
chr5	24625803	24627330	-	24626048	24627330	3pMXE	0.5	50	50	ENSMUST00000197619.2	ENSMUSG00000028969.11	Cdk5	chr5	protein_coding	cyclin-dependent kinase 5
chr5	24629149	24634414	+	24629149	24632521	3pMXE	0.5	50	50	ENSMUST00000153274.2	ENSMUSG00000028962.15	Slc4a2	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 2
chr5	24629366	24632521	+	24629149	24632521	A5SS	0.2	50	50	ENSMUST00000153274.2	ENSMUSG00000028962.15	Slc4a2	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 2
chr5	24630433	24632521	+	24629149	24632521	A5SS	0.2	50	50	ENSMUST00000153274.2	ENSMUSG00000028962.15	Slc4a2	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 2
chr5	24630440	24632521	+	24629149	24632521	A5SS	0.2	50	50	ENSMUST00000153274.2	ENSMUSG00000028962.15	Slc4a2	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 2
chr5	24631855	24632521	+	24629149	24632521	A5SS	0.2	50	50	ENSMUST00000153274.2	ENSMUSG00000028962.15	Slc4a2	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 2
chr5	24629149;24632634	24632521;24634414	+	24629149	24634414	cassetteExon	0.5	100	100	ENSMUST00000127315.8	ENSMUSG00000028962.15	Slc4a2	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 2
chr5	24633271	24634414	+	24629149	24634414	A5SS	0.2	50	50	ENSMUST00000127315.8	ENSMUSG00000028962.15	Slc4a2	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 2
chr5	24633317	24634414	+	24629149	24634414	A5SS	0.2	50	50	ENSMUST00000127315.8	ENSMUSG00000028962.15	Slc4a2	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 2
chr5	24633826	24634414	+	24629149	24634414	A5SS	0.2	50	50	ENSMUST00000127315.8	ENSMUSG00000028962.15	Slc4a2	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 2
chr5	24629149	24634414	+	24632634	24634414	A5SS&ES	0.2	50	50	ENSMUST00000141966.8	ENSMUSG00000028962.15	Slc4a2	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 2
chr5	24630433	24632521	+	24629366	24632521	A5SS	0.2	50	50	ENSMUST00000141966.8	ENSMUSG00000028962.15	Slc4a2	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 2
chr5	24630440	24632521	+	24629366	24632521	A5SS	0.2	50	50	ENSMUST00000141966.8	ENSMUSG00000028962.15	Slc4a2	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 2
chr5	24631855	24632521	+	24629366	24632521	A5SS	0.2	50	50	ENSMUST00000141966.8	ENSMUSG00000028962.15	Slc4a2	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 2
chr5	24633271	24634414	+	24632634	24634414	A5SS	0.2	50	50	ENSMUST00000141966.8	ENSMUSG00000028962.15	Slc4a2	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 2
chr5	24633317	24634414	+	24632634	24634414	A5SS	0.2	50	50	ENSMUST00000141966.8	ENSMUSG00000028962.15	Slc4a2	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 2
chr5	24633826	24634414	+	24632634	24634414	A5SS	0.2	50	50	ENSMUST00000141966.8	ENSMUSG00000028962.15	Slc4a2	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 2
chr5	24630440	24632521	+	24630433	24632521	A5SS	0.2	50	50	ENSMUST00000080067.13	ENSMUSG00000028962.15	Slc4a2	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 2
chr5	24631855	24632521	+	24630433	24632521	A5SS	0.2	50	50	ENSMUST00000080067.13	ENSMUSG00000028962.15	Slc4a2	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 2
chr5	24631855	24632521	+	24630440	24632521	A5SS	0.2	50	50	ENSMUST00000144305.2	ENSMUSG00000028962.15	Slc4a2	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 2
chr5	24633317	24634414	+	24633271	24634414	A5SS	0.2	50	50	ENSMUST00000115049.9	ENSMUSG00000028962.15	Slc4a2	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 2
chr5	24633826	24634414	+	24633271	24634414	A5SS	0.2	50	50	ENSMUST00000115049.9	ENSMUSG00000028962.15	Slc4a2	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 2
chr5	24633826	24634414	+	24633317	24634414	A5SS	0.2	50	50	ENSMUST00000136440.2	ENSMUSG00000028962.15	Slc4a2	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 2
chr5	24648141	24648893	-	24648141;24648454	24648275;24648893	ES	0.33	50	50	ENSMUST00000115043.8	ENSMUSG00000028959.15	Fastk	chr5	protein_coding	Fas-activated serine/threonine kinase
chr5	24648454	24650064	-	24648454;24649303	24648893;24650064	ES	0.33	50	50	ENSMUST00000115043.8	ENSMUSG00000028959.15	Fastk	chr5	protein_coding	Fas-activated serine/threonine kinase
chr5	24646259	24646334	-	24644916	24646334	A3SS	0.5	50	50	ENSMUST00000115043.8	ENSMUSG00000028959.15	Fastk	chr5	protein_coding	Fas-activated serine/threonine kinase
chr5	24646259	24646730	-	24646661	24646730	A3SS&ES	0.5	50	50	ENSMUST00000115043.8	ENSMUSG00000028959.15	Fastk	chr5	protein_coding	Fas-activated serine/threonine kinase
chr5	24646463	24646526	-	24646448	24646526	A3SS	0.5	50	50	ENSMUST00000115043.8	ENSMUSG00000028959.15	Fastk	chr5	protein_coding	Fas-activated serine/threonine kinase
chr5	24647098	24647180	-	24647081	24647180	A3SS	0.5	50	50	ENSMUST00000115043.8	ENSMUSG00000028959.15	Fastk	chr5	protein_coding	Fas-activated serine/threonine kinase
chr5	24649393	24650064	-	24649303	24650064	A3SS	0.33	50	50	ENSMUST00000115043.8	ENSMUSG00000028959.15	Fastk	chr5	protein_coding	Fas-activated serine/threonine kinase
chr5	24649303	24650015	-	24649303	24650064	A5SS	0.5	50	50	ENSMUST00000115043.8	ENSMUSG00000028959.15	Fastk	chr5	protein_coding	Fas-activated serine/threonine kinase
chr5	24647393	24648893	-	24647393;24648141	24648002;24648893	ES	0.33	50	50	ENSMUST00000149537.8	ENSMUSG00000028959.15	Fastk	chr5	protein_coding	Fas-activated serine/threonine kinase
chr5	24646259	24646730	-	24646259	24646334	A5SS&ES	0.5	50	50	ENSMUST00000132109.8	ENSMUSG00000028959.15	Fastk	chr5	protein_coding	Fas-activated serine/threonine kinase
chr5	24646259;24646661	24646334;24646730	-	24646259	24646730	cassetteExon	0.5	100	100	ENSMUST00000144389.8	ENSMUSG00000028959.15	Fastk	chr5	protein_coding	Fas-activated serine/threonine kinase
chr5	24648454	24650064	-	24648454	24648893	A5SS&ES	0.5	50	50	ENSMUST00000144389.8	ENSMUSG00000028959.15	Fastk	chr5	protein_coding	Fas-activated serine/threonine kinase
chr5	24647393;24649303	24648893;24650064	-	24647393;24648454	24648002;24650064	MXE	0.5	100	100	ENSMUST00000115041.2	ENSMUSG00000028959.15	Fastk	chr5	protein_coding	Fas-activated serine/threonine kinase
chr5	24648141;24649303	24648893;24650064	-	24648141;24648454	24648275;24650064	MXE	0.5	100	100	ENSMUST00000115041.2	ENSMUSG00000028959.15	Fastk	chr5	protein_coding	Fas-activated serine/threonine kinase
chr5	24647393;24649393	24648893;24650064	-	24647393;24648454	24648002;24650064	MXE	0.5	100	100	ENSMUST00000115041.2	ENSMUSG00000028959.15	Fastk	chr5	protein_coding	Fas-activated serine/threonine kinase
chr5	24648141;24649393	24648893;24650064	-	24648141;24648454	24648275;24650064	MXE	0.5	100	100	ENSMUST00000115041.2	ENSMUSG00000028959.15	Fastk	chr5	protein_coding	Fas-activated serine/threonine kinase
chr5	24648454;24649393	24648893;24650064	-	24648454	24650064	cassetteExon	0.5	100	100	ENSMUST00000115041.2	ENSMUSG00000028959.15	Fastk	chr5	protein_coding	Fas-activated serine/threonine kinase
chr5	24647393;24648454	24648002;24648893	-	24647393	24648893	cassetteExon	0.5	100	100	ENSMUST00000139307.2	ENSMUSG00000028959.15	Fastk	chr5	protein_coding	Fas-activated serine/threonine kinase
chr5	24647393	24648893	-	24648454	24648893	3pMXE	0.33	50	50	ENSMUST00000123144.2	ENSMUSG00000028959.15	Fastk	chr5	protein_coding	Fas-activated serine/threonine kinase
chr5	24648141	24648893	-	24648454	24648893	3pMXE	0.33	50	50	ENSMUST00000123144.2	ENSMUSG00000028959.15	Fastk	chr5	protein_coding	Fas-activated serine/threonine kinase
chr5	24649256	24649373	-	24649124	24649373	A3SS	0.5	50	50	ENSMUST00000131946.8	ENSMUSG00000028959.15	Fastk	chr5	protein_coding	Fas-activated serine/threonine kinase
chr5	24651287	24651532	-	24651271	24651532	A3SS	0.5	50	50	ENSMUST00000030799.15	ENSMUSG00000028958.16	Tmub1	chr5	protein_coding	transmembrane and ubiquitin-like domain containing 1
chr5	24651950	24652088	-	24651950	24652755	A5SS	0.2	50	50	ENSMUST00000030799.15	ENSMUSG00000028958.16	Tmub1	chr5	protein_coding	transmembrane and ubiquitin-like domain containing 1
chr5	24651950	24652253	-	24651950	24652755	A5SS	0.2	50	50	ENSMUST00000030799.15	ENSMUSG00000028958.16	Tmub1	chr5	protein_coding	transmembrane and ubiquitin-like domain containing 1
chr5	24651950	24652455	-	24651950	24652755	A5SS	0.2	50	50	ENSMUST00000030799.15	ENSMUSG00000028958.16	Tmub1	chr5	protein_coding	transmembrane and ubiquitin-like domain containing 1
chr5	24651950	24652745	-	24651950	24652755	A5SS	0.2	50	50	ENSMUST00000030799.15	ENSMUSG00000028958.16	Tmub1	chr5	protein_coding	transmembrane and ubiquitin-like domain containing 1
chr5	24651950	24652455	-	24651950	24652088	5pMXE	0.2	50	50	ENSMUST00000115036.8	ENSMUSG00000028958.16	Tmub1	chr5	protein_coding	transmembrane and ubiquitin-like domain containing 1
chr5	24651950	24652745	-	24651950	24652088	5pMXE	0.2	50	50	ENSMUST00000115036.8	ENSMUSG00000028958.16	Tmub1	chr5	protein_coding	transmembrane and ubiquitin-like domain containing 1
chr5	24651950	24652253	-	24651950	24652088	A5SS	0.2	50	50	ENSMUST00000115036.8	ENSMUSG00000028958.16	Tmub1	chr5	protein_coding	transmembrane and ubiquitin-like domain containing 1
chr5	24651950	24652745	-	24651950	24652253	5pMXE	0.2	50	50	ENSMUST00000115033.8	ENSMUSG00000028958.16	Tmub1	chr5	protein_coding	transmembrane and ubiquitin-like domain containing 1
chr5	24651950	24652455	-	24651950	24652253	A5SS	0.2	50	50	ENSMUST00000115033.8	ENSMUSG00000028958.16	Tmub1	chr5	protein_coding	transmembrane and ubiquitin-like domain containing 1
chr5	24651950	24652745	-	24651950	24652455	5pMXE	0.2	50	50	ENSMUST00000127194.2	ENSMUSG00000028958.16	Tmub1	chr5	protein_coding	transmembrane and ubiquitin-like domain containing 1
chr5	24684787	24685121	+	24684787	24688339	A3SS	0.33	50	50	ENSMUST00000024123.9	ENSMUSG00000023353.15	Agap3	chr5	protein_coding	ArfGAP with GTPase domain, ankyrin repeat and PH domain 3
chr5	24684787	24687264	+	24684787	24688339	A3SS	0.33	50	50	ENSMUST00000024123.9	ENSMUSG00000023353.15	Agap3	chr5	protein_coding	ArfGAP with GTPase domain, ankyrin repeat and PH domain 3
chr5	24680180	24681376	+	24657532	24681376	A5SS	0.5	50	50	ENSMUST00000024123.9	ENSMUSG00000023353.15	Agap3	chr5	protein_coding	ArfGAP with GTPase domain, ankyrin repeat and PH domain 3
chr5	24684787	24687264	+	24684787	24685121	3pMXE	0.33	50	50	ENSMUST00000212381.2	ENSMUSG00000023353.15	Agap3	chr5	protein_coding	ArfGAP with GTPase domain, ankyrin repeat and PH domain 3
chr5	24684787;24685346	24685121;24687264	+	24684787	24687264	cassetteExon	0.5	100	100	ENSMUST00000199647.2	ENSMUSG00000023353.15	Agap3	chr5	protein_coding	ArfGAP with GTPase domain, ankyrin repeat and PH domain 3
chr5	24698124	24701731	+	24698124	24704656	A3SS	0.5	50	50	ENSMUST00000197513.2	ENSMUSG00000023353.15	Agap3	chr5	protein_coding	ArfGAP with GTPase domain, ankyrin repeat and PH domain 3
chr5	24703205	24704656	+	24698124	24704656	A5SS	0.5	50	50	ENSMUST00000197513.2	ENSMUSG00000023353.15	Agap3	chr5	protein_coding	ArfGAP with GTPase domain, ankyrin repeat and PH domain 3
chr5	24684787	24687264	+	24685346	24687264	5pMXE	0.5	50	50	ENSMUST00000199250.2	ENSMUSG00000023353.15	Agap3	chr5	protein_coding	ArfGAP with GTPase domain, ankyrin repeat and PH domain 3
chr5	24738837	24742628	-	24738837;24739218	24739105;24742628	ES	0.5	50	50	ENSMUST00000048302.13	ENSMUSG00000038204.14	Asb10	chr5	protein_coding	ankyrin repeat and SOCS box-containing 10
chr5	24744876	24745654	-	24744876	24745032	5pMXE	0.5	50	50	ENSMUST00000048302.13	ENSMUSG00000038204.14	Asb10	chr5	protein_coding	ankyrin repeat and SOCS box-containing 10
chr5	24757756	24759430	-	24757756;24758653	24758534;24759430	ES	0.5	50	50	ENSMUST00000200634.5	ENSMUSG00000038199.13	Iqca1l	chr5	protein_coding	IQ motif containing with AAA domain 1 like
chr5	24759757	24761596	-	24759757	24760370	5pMXE	0.5	50	50	ENSMUST00000200634.5	ENSMUSG00000038199.13	Iqca1l	chr5	protein_coding	IQ motif containing with AAA domain 1 like
chr5	24757030	24757571	-	24757128	24757571	A3SS	0.5	50	50	ENSMUST00000200634.5	ENSMUSG00000038199.13	Iqca1l	chr5	protein_coding	IQ motif containing with AAA domain 1 like
chr5	24791981	24795307	+	24794659	24795307	A5SS&ES	0.5	50	50	ENSMUST00000088295.9	ENSMUSG00000038181.17	Chpf2	chr5	protein_coding	chondroitin polymerizing factor 2
chr5	24792121	24794095	+	24793298	24794095	A5SS	0.5	50	50	ENSMUST00000088295.9	ENSMUSG00000038181.17	Chpf2	chr5	protein_coding	chondroitin polymerizing factor 2
chr5	24803801	24827522	-	24803801	24806779	5pMXE	0.5	50	50	ENSMUST00000144995.8	ENSMUSG00000028949.14	Smarcd3	chr5	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
chr5	24798770	24798920	-	24798829	24798920	A3SS	0.5	50	50	ENSMUST00000144995.8	ENSMUSG00000028949.14	Smarcd3	chr5	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
chr5	24891020	24894378	+	24891020	24894391	A3SS	0.5	50	50	ENSMUST00000197407.5	ENSMUSG00000028954.12	Nub1	chr5	protein_coding	negative regulator of ubiquitin-like proteins 1
chr5	24917951;24919003	24918914;24920524	-	24917951	24920524	cassetteExon	0.5	100	100	ENSMUST00000068693.12	ENSMUSG00000055235.12	Wdr86	chr5	protein_coding	WD repeat domain 86
chr5	24956187	24959132	-	24956187	24956289	5pMXE	0.5	50	50	ENSMUST00000123386.2	ENSMUSG00000038135.5	Crygn	chr5	protein_coding	crystallin, gamma N
chr5	25094186	25113321	-	25094183	25113321	A3SS	0.33	50	50	ENSMUST00000030784.14	ENSMUSG00000028944.15	Prkag2	chr5	protein_coding	protein kinase, AMP-activated, gamma 2 non-catalytic subunit
chr5	25111558	25113321	-	25094183	25113321	A3SS	0.33	50	50	ENSMUST00000030784.14	ENSMUSG00000028944.15	Prkag2	chr5	protein_coding	protein kinase, AMP-activated, gamma 2 non-catalytic subunit
chr5	25113390	25113863	-	25113390	25152422	A5SS	0.5	50	50	ENSMUST00000030784.14	ENSMUSG00000028944.15	Prkag2	chr5	protein_coding	protein kinase, AMP-activated, gamma 2 non-catalytic subunit
chr5	25152636	25200260	-	25152636	25226790	A5SS	0.5	50	50	ENSMUST00000030784.14	ENSMUSG00000028944.15	Prkag2	chr5	protein_coding	protein kinase, AMP-activated, gamma 2 non-catalytic subunit
chr5	25111558	25113321	-	25094186	25113321	A3SS	0.33	50	50	ENSMUST00000076306.12	ENSMUSG00000028944.15	Prkag2	chr5	protein_coding	protein kinase, AMP-activated, gamma 2 non-catalytic subunit
chr5	25094186	25102326	-	25094186	25113321	A5SS	0.5	50	50	ENSMUST00000076306.12	ENSMUSG00000028944.15	Prkag2	chr5	protein_coding	protein kinase, AMP-activated, gamma 2 non-catalytic subunit
chr5	25386642	25391197	+	25386642	25391072	A3SS	0.5	50	50	ENSMUST00000030778.9	ENSMUSG00000028938.10	Galntl5	chr5	protein_coding	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5
chr5	25451418	25452452	+	25428029	25452452	A5SS	0.5	50	50	ENSMUST00000045737.14	ENSMUSG00000038072.15	Galnt11	chr5	protein_coding	polypeptide N-acetylgalactosaminyltransferase 11
chr5	25498246	25500396	-	25499719	25500396	A3SS&ES	0.5	50	50	ENSMUST00000174734.8	ENSMUSG00000038056.16	Kmt2c	chr5	protein_coding	lysine (K)-specific methyltransferase 2C
chr5	25498246	25503868	-	25500608	25503868	A3SS&ES	0.5	50	50	ENSMUST00000174734.8	ENSMUSG00000038056.16	Kmt2c	chr5	protein_coding	lysine (K)-specific methyltransferase 2C
chr5	25486398	25486671	-	25486398	25486659	A5SS	0.5	50	50	ENSMUST00000174734.8	ENSMUSG00000038056.16	Kmt2c	chr5	protein_coding	lysine (K)-specific methyltransferase 2C
chr5	25498246;25500608	25500396;25503868	-	25498246	25503868	cassetteExon	0.5	100	100	ENSMUST00000172556.8	ENSMUSG00000038056.16	Kmt2c	chr5	protein_coding	lysine (K)-specific methyltransferase 2C
chr5	25534573	25543411	-	25534573;25535898	25535794;25543411	ES	0.5	50	50	ENSMUST00000045291.14	ENSMUSG00000038056.16	Kmt2c	chr5	protein_coding	lysine (K)-specific methyltransferase 2C
chr5	25568560	25577764	-	25568560;25571194	25571075;25577764	ES	0.5	50	50	ENSMUST00000045291.14	ENSMUSG00000038056.16	Kmt2c	chr5	protein_coding	lysine (K)-specific methyltransferase 2C
chr5	25579562	25580340	-	25579565	25580340	A3SS	0.5	50	50	ENSMUST00000045291.14	ENSMUSG00000038056.16	Kmt2c	chr5	protein_coding	lysine (K)-specific methyltransferase 2C
chr5	25901205	25903249	-	25897826	25903249	A3SS	0.5	50	50	ENSMUST00000030773.12	ENSMUSG00000028933.12	Xrcc2	chr5	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 2
chr5	25897826	25898325	-	25897826	25903249	A5SS	0.5	50	50	ENSMUST00000030773.12	ENSMUSG00000028933.12	Xrcc2	chr5	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 2
chr5	25965126;26003499	26003444;26014783	+	25965126	26014783	cassetteExon	0.5	100	100	ENSMUST00000128727.8	ENSMUSG00000056367.15	Actr3b	chr5	protein_coding	ARP3 actin-related protein 3B
chr5	25965126	25982001	+	25965126	26014783	A3SS	0.33	50	50	ENSMUST00000128727.8	ENSMUSG00000056367.15	Actr3b	chr5	protein_coding	ARP3 actin-related protein 3B
chr5	25965126	25982001	+	25965126	26003444	A3SS	0.33	50	50	ENSMUST00000088244.6	ENSMUSG00000056367.15	Actr3b	chr5	protein_coding	ARP3 actin-related protein 3B
chr5	26665368	26684717	-	26665368;26673561	26673398;26684717	ES	0.33	50	50	ENSMUST00000198070.5	ENSMUSG00000029044.10	4930584F24Rik	chr5	lncRNA	RIKEN cDNA 4930584F24 gene
chr5	26685087	26698240	-	26685087;26695657	26695379;26698240	ES	0.5	50	50	ENSMUST00000198070.5	ENSMUSG00000029044.10	4930584F24Rik	chr5	lncRNA	RIKEN cDNA 4930584F24 gene
chr5	26680325	26684717	-	26673561	26684717	A3SS	0.33	50	50	ENSMUST00000198070.5	ENSMUSG00000029044.10	4930584F24Rik	chr5	lncRNA	RIKEN cDNA 4930584F24 gene
chr5	26684865	26695379	-	26685087	26695379	A3SS	0.5	50	50	ENSMUST00000198070.5	ENSMUSG00000029044.10	4930584F24Rik	chr5	lncRNA	RIKEN cDNA 4930584F24 gene
chr5	26685087	26688288	-	26685087	26695379	A5SS	0.33	50	50	ENSMUST00000198070.5	ENSMUSG00000029044.10	4930584F24Rik	chr5	lncRNA	RIKEN cDNA 4930584F24 gene
chr5	26680325	26684717	-	26665368	26684717	A3SS	0.33	50	50	ENSMUST00000197091.5	ENSMUSG00000029044.10	4930584F24Rik	chr5	lncRNA	RIKEN cDNA 4930584F24 gene
chr5	26685087	26698240	-	26695657	26698240	A3SS&ES	0.5	50	50	ENSMUST00000030910.6	ENSMUSG00000029044.10	4930584F24Rik	chr5	lncRNA	RIKEN cDNA 4930584F24 gene
chr5	26685087	26688288	-	26685087	26698240	A5SS	0.33	50	50	ENSMUST00000196508.2	ENSMUSG00000029044.10	4930584F24Rik	chr5	lncRNA	RIKEN cDNA 4930584F24 gene
chr5	27023116	27024683	+	27023116	27587753	A3SS	0.5	50	50	ENSMUST00000071500.13	ENSMUSG00000061576.16	Dpp6	chr5	protein_coding	dipeptidylpeptidase 6
chr5	27110286	27587753	+	27023116	27587753	A5SS	0.2	50	50	ENSMUST00000071500.13	ENSMUSG00000061576.16	Dpp6	chr5	protein_coding	dipeptidylpeptidase 6
chr5	27254811	27587753	+	27023116	27587753	A5SS	0.2	50	50	ENSMUST00000071500.13	ENSMUSG00000061576.16	Dpp6	chr5	protein_coding	dipeptidylpeptidase 6
chr5	27467359	27587753	+	27023116	27587753	A5SS	0.2	50	50	ENSMUST00000071500.13	ENSMUSG00000061576.16	Dpp6	chr5	protein_coding	dipeptidylpeptidase 6
chr5	27571868	27587753	+	27023116	27587753	A5SS	0.2	50	50	ENSMUST00000071500.13	ENSMUSG00000061576.16	Dpp6	chr5	protein_coding	dipeptidylpeptidase 6
chr5	27738875	27742980	+	27674483	27742980	A5SS	0.5	50	50	ENSMUST00000071500.13	ENSMUSG00000061576.16	Dpp6	chr5	protein_coding	dipeptidylpeptidase 6
chr5	27254811	27587753	+	27110286	27587753	A5SS	0.2	50	50	ENSMUST00000120555.8	ENSMUSG00000061576.16	Dpp6	chr5	protein_coding	dipeptidylpeptidase 6
chr5	27467359	27587753	+	27110286	27587753	A5SS	0.2	50	50	ENSMUST00000120555.8	ENSMUSG00000061576.16	Dpp6	chr5	protein_coding	dipeptidylpeptidase 6
chr5	27571868	27587753	+	27110286	27587753	A5SS	0.2	50	50	ENSMUST00000120555.8	ENSMUSG00000061576.16	Dpp6	chr5	protein_coding	dipeptidylpeptidase 6
chr5	27467359	27587753	+	27254811	27587753	A5SS	0.2	50	50	ENSMUST00000122171.8	ENSMUSG00000061576.16	Dpp6	chr5	protein_coding	dipeptidylpeptidase 6
chr5	27571868	27587753	+	27254811	27587753	A5SS	0.2	50	50	ENSMUST00000122171.8	ENSMUSG00000061576.16	Dpp6	chr5	protein_coding	dipeptidylpeptidase 6
chr5	27467359	27587753	+	27467359;27571868	27571805;27587753	ES	0.5	50	50	ENSMUST00000148039.8	ENSMUSG00000061576.16	Dpp6	chr5	protein_coding	dipeptidylpeptidase 6
chr5	27986483	27988679	-	27986483	27988728	A5SS	0.5	50	50	ENSMUST00000002291.12	ENSMUSG00000002221.12	Paxip1	chr5	protein_coding	PAX interacting (with transcription-activation domain) protein 1
chr5	27993775	27996525	-	27993775	27996197	A5SS	0.5	50	50	ENSMUST00000002291.12	ENSMUSG00000002221.12	Paxip1	chr5	protein_coding	PAX interacting (with transcription-activation domain) protein 1
chr5	28260113	28260261	-	28260113	28275802	A5SS	0.5	50	50	ENSMUST00000180740.2	ENSMUSG00000097673.2	Gm26608	chr5	lncRNA	predicted gene, 26608
chr5	28414325	28414886	-	28414325	28450706	A5SS	0.33	50	50	ENSMUST00000141601.9	ENSMUSG00000044681.20	Cnpy1	chr5	protein_coding	canopy FGF signaling regulator 1
chr5	28414325	28442716	-	28414325	28450706	A5SS	0.33	50	50	ENSMUST00000141601.9	ENSMUSG00000044681.20	Cnpy1	chr5	protein_coding	canopy FGF signaling regulator 1
chr5	28414325	28414886	-	28414325	28442716	A5SS	0.33	50	50	ENSMUST00000120068.2	ENSMUSG00000044681.20	Cnpy1	chr5	protein_coding	canopy FGF signaling regulator 1
chr5	28544306;28547512	28547393;28557470	+	28544306	28557470	cassetteExon	0.5	100	100	ENSMUST00000090355.11	ENSMUSG00000048271.15	Rbm33	chr5	protein_coding	RNA binding motif protein 33
chr5	28599668	28613253	+	28599668	28613250	A3SS	0.5	50	50	ENSMUST00000114884.8	ENSMUSG00000048271.15	Rbm33	chr5	protein_coding	RNA binding motif protein 33
chr5	28618373	28618669	+	28618373	28618566	A3SS	0.5	50	50	ENSMUST00000114884.8	ENSMUSG00000048271.15	Rbm33	chr5	protein_coding	RNA binding motif protein 33
chr5	28769467	28873978	+	28769467	28947635	A3SS	0.5	50	50	ENSMUST00000180878.8	ENSMUSG00000097726.8	9530036O11Rik	chr5	lncRNA	RIKEN cDNA 9530036O11Rik
chr5	28672346	28769331	+	28663444	28769331	A5SS	0.5	50	50	ENSMUST00000180878.8	ENSMUSG00000097726.8	9530036O11Rik	chr5	lncRNA	RIKEN cDNA 9530036O11Rik
chr5	29403836	29410667	+	29403836	29408053	3pMXE	0.5	50	50	ENSMUST00000160888.8	ENSMUSG00000029130.13	Rnf32	chr5	protein_coding	ring finger protein 32
chr5	29401110;29401643	29401578;29402924	+	29401110	29402924	cassetteExon	0.5	100	100	ENSMUST00000160888.8	ENSMUSG00000029130.13	Rnf32	chr5	protein_coding	ring finger protein 32
chr5	29403018	29403623	+	29403018	29403572	A3SS	0.33	50	50	ENSMUST00000160888.8	ENSMUSG00000029130.13	Rnf32	chr5	protein_coding	ring finger protein 32
chr5	29403018	29403666	+	29403018	29403572	A3SS	0.33	50	50	ENSMUST00000160888.8	ENSMUSG00000029130.13	Rnf32	chr5	protein_coding	ring finger protein 32
chr5	29411802	29430041	+	29411802;29429282	29429115;29430041	ES	0.5	50	50	ENSMUST00000160383.8	ENSMUSG00000029130.13	Rnf32	chr5	protein_coding	ring finger protein 32
chr5	29403836;29408195	29408053;29410667	+	29403836	29410667	cassetteExon	0.5	100	100	ENSMUST00000160383.8	ENSMUSG00000029130.13	Rnf32	chr5	protein_coding	ring finger protein 32
chr5	29410699;29411296	29411172;29411694	+	29410699	29411694	cassetteExon	0.5	100	100	ENSMUST00000160383.8	ENSMUSG00000029130.13	Rnf32	chr5	protein_coding	ring finger protein 32
chr5	29401082	29401578	+	29401110	29401578	A5SS	0.5	50	50	ENSMUST00000160383.8	ENSMUSG00000029130.13	Rnf32	chr5	protein_coding	ring finger protein 32
chr5	29403018	29403666	+	29403018	29403623	A3SS	0.33	50	50	ENSMUST00000159272.8	ENSMUSG00000029130.13	Rnf32	chr5	protein_coding	ring finger protein 32
chr5	29401110	29402924	+	29401643	29402924	A5SS&ES	0.5	50	50	ENSMUST00000159272.8	ENSMUSG00000029130.13	Rnf32	chr5	protein_coding	ring finger protein 32
chr5	29438146	29457741	-	29438146;29440137	29439976;29457741	ES	0.5	50	50	ENSMUST00000055195.11	ENSMUSG00000010721.16	Lmbr1	chr5	protein_coding	limb region 1
chr5	29463133	29468393	-	29463133;29463753	29463677;29468393	ES	0.5	50	50	ENSMUST00000055195.11	ENSMUSG00000010721.16	Lmbr1	chr5	protein_coding	limb region 1
chr5	29497947	29551765	-	29497947;29528903	29528800;29551765	ES	0.33	50	50	ENSMUST00000055195.11	ENSMUSG00000010721.16	Lmbr1	chr5	protein_coding	limb region 1
chr5	29566085	29583125	-	29566085;29568953	29568881;29583125	ES	0.33	50	50	ENSMUST00000055195.11	ENSMUSG00000010721.16	Lmbr1	chr5	protein_coding	limb region 1
chr5	29528822	29551765	-	29528903	29551765	A3SS	0.33	50	50	ENSMUST00000055195.11	ENSMUSG00000010721.16	Lmbr1	chr5	protein_coding	limb region 1
chr5	29570813	29583125	-	29568953	29583125	A3SS	0.33	50	50	ENSMUST00000055195.11	ENSMUSG00000010721.16	Lmbr1	chr5	protein_coding	limb region 1
chr5	29497947	29498811	-	29497947	29528800	A5SS	0.33	50	50	ENSMUST00000055195.11	ENSMUSG00000010721.16	Lmbr1	chr5	protein_coding	limb region 1
chr5	29568953	29569919	-	29568953	29583125	A5SS	0.5	50	50	ENSMUST00000055195.11	ENSMUSG00000010721.16	Lmbr1	chr5	protein_coding	limb region 1
chr5	29497947	29551765	-	29497947	29498811	A5SS&ES	0.33	50	50	ENSMUST00000179191.6	ENSMUSG00000010721.16	Lmbr1	chr5	protein_coding	limb region 1
chr5	29568953	29583125	-	29568953;29570813	29569919;29583125	ES	0.33	50	50	ENSMUST00000196321.5	ENSMUSG00000010721.16	Lmbr1	chr5	protein_coding	limb region 1
chr5	29497947	29551765	-	29497947;29528822	29528800;29551765	ES	0.33	50	50	ENSMUST00000198105.5	ENSMUSG00000010721.16	Lmbr1	chr5	protein_coding	limb region 1
chr5	29570813	29583125	-	29566085	29583125	A3SS	0.33	50	50	ENSMUST00000200564.5	ENSMUSG00000010721.16	Lmbr1	chr5	protein_coding	limb region 1
chr5	29438146	29457741	-	29440137	29457741	3pMXE	0.5	50	50	ENSMUST00000200149.2	ENSMUSG00000010721.16	Lmbr1	chr5	protein_coding	limb region 1
chr5	29795954;29797300	29797117;29802067	+	29795954	29802067	cassetteExon	0.5	100	100	ENSMUST00000049453.9	ENSMUSG00000039000.9	Ube3c	chr5	protein_coding	ubiquitin protein ligase E3C
chr5	29941114	29944058	+	29941114	29953343	A3SS	0.5	50	50	ENSMUST00000008733.15	ENSMUSG00000029131.15	Dnajb6	chr5	protein_coding	DnaJ heat shock protein family (Hsp40) member B6
chr5	29958650	29961232	+	29958650	29969397	A3SS	0.5	50	50	ENSMUST00000008733.15	ENSMUSG00000029131.15	Dnajb6	chr5	protein_coding	DnaJ heat shock protein family (Hsp40) member B6
chr5	29942387	29953343	+	29941114	29953343	A5SS	0.5	50	50	ENSMUST00000008733.15	ENSMUSG00000029131.15	Dnajb6	chr5	protein_coding	DnaJ heat shock protein family (Hsp40) member B6
chr5	29959589	29961232	+	29958650	29961232	A5SS	0.5	50	50	ENSMUST00000012734.10	ENSMUSG00000029131.15	Dnajb6	chr5	protein_coding	DnaJ heat shock protein family (Hsp40) member B6
chr5	29971393	29986128	+	29971393	30022919	A3SS	0.5	50	50	ENSMUST00000196528.5	ENSMUSG00000029131.15	Dnajb6	chr5	protein_coding	DnaJ heat shock protein family (Hsp40) member B6
chr5	30209562	30212652	-	30209562	30213765	A5SS	0.5	50	50	ENSMUST00000200055.2	ENSMUSG00000105439.2	A230098N10Rik	chr5	lncRNA	RIKEN cDNA A230098N10 gene
chr5	30223152	30224437	+	30223152	30224379	A3SS	0.5	50	50	ENSMUST00000026845.12	ENSMUSG00000025746.12	Il6	chr5	protein_coding	interleukin 6
chr5	30273638	30276632	-	30273638;30274953	30274832;30276632	ES	0.25	50	50	ENSMUST00000141630.8	ENSMUSG00000025747.13	Tyms	chr5	protein_coding	thymidylate synthase
chr5	30267037	30268234	-	30267047	30268234	A3SS	0.5	50	50	ENSMUST00000141630.8	ENSMUSG00000025747.13	Tyms	chr5	protein_coding	thymidylate synthase
chr5	30273140	30273464	-	30269184	30273464	A3SS	0.5	50	50	ENSMUST00000141630.8	ENSMUSG00000025747.13	Tyms	chr5	protein_coding	thymidylate synthase
chr5	30273536	30276632	-	30274953	30276632	A3SS&ES	0.25	50	50	ENSMUST00000141630.8	ENSMUSG00000025747.13	Tyms	chr5	protein_coding	thymidylate synthase
chr5	30276705	30278460	-	30276705	30278359	A5SS	0.5	50	50	ENSMUST00000141630.8	ENSMUSG00000025747.13	Tyms	chr5	protein_coding	thymidylate synthase
chr5	30269184	30276632	-	30269184;30273638	30273464;30276632	ES	0.25	50	50	ENSMUST00000026846.11	ENSMUSG00000025747.13	Tyms	chr5	protein_coding	thymidylate synthase
chr5	30273536	30276632	-	30273638	30276632	A3SS	0.25	50	50	ENSMUST00000026846.11	ENSMUSG00000025747.13	Tyms	chr5	protein_coding	thymidylate synthase
chr5	30269184	30276632	-	30269184	30273464	A5SS&ES	0.33	50	50	ENSMUST00000154751.6	ENSMUSG00000025747.13	Tyms	chr5	protein_coding	thymidylate synthase
chr5	30273638	30276632	-	30273638	30274832	A5SS	0.5	50	50	ENSMUST00000154751.6	ENSMUSG00000025747.13	Tyms	chr5	protein_coding	thymidylate synthase
chr5	30269184	30278359	-	30269184;30276705	30276632;30278359	ES	0.5	50	50	ENSMUST00000196095.5	ENSMUSG00000025747.13	Tyms	chr5	protein_coding	thymidylate synthase
chr5	30269184;30273536	30273464;30276632	-	30269184	30276632	cassetteExon	0.5	100	100	ENSMUST00000196095.5	ENSMUSG00000025747.13	Tyms	chr5	protein_coding	thymidylate synthase
chr5	30274953	30276632	-	30269184	30276632	A3SS	0.25	50	50	ENSMUST00000196095.5	ENSMUSG00000025747.13	Tyms	chr5	protein_coding	thymidylate synthase
chr5	30269184	30273464	-	30269184	30278359	A5SS	0.33	50	50	ENSMUST00000196872.2	ENSMUSG00000025747.13	Tyms	chr5	protein_coding	thymidylate synthase
chr5	30339137	30339977	-	30339174	30339977	A3SS	0.5	50	50	ENSMUST00000156859.3	ENSMUSG00000025745.13	Hadha	chr5	protein_coding	hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha
chr5	30369068	30373522	+	30369068;30371762	30371663;30373522	ES	0.5	50	50	ENSMUST00000026841.15	ENSMUSG00000059447.14	Hadhb	chr5	protein_coding	hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta
chr5	30360380	30368667	+	30360337	30368667	A5SS	0.33	50	50	ENSMUST00000026841.15	ENSMUSG00000059447.14	Hadhb	chr5	protein_coding	hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta
chr5	30360384	30368667	+	30360337	30368667	A5SS	0.33	50	50	ENSMUST00000026841.15	ENSMUSG00000059447.14	Hadhb	chr5	protein_coding	hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta
chr5	30374593	30377624	+	30374593	30379789	A3SS	0.5	50	50	ENSMUST00000123980.8	ENSMUSG00000059447.14	Hadhb	chr5	protein_coding	hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta
chr5	30378995	30379789	+	30374593	30379789	A5SS	0.5	50	50	ENSMUST00000123980.8	ENSMUSG00000059447.14	Hadhb	chr5	protein_coding	hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta
chr5	30360380	30368667	+	30360384	30368667	A5SS	0.33	50	50	ENSMUST00000114783.6	ENSMUSG00000059447.14	Hadhb	chr5	protein_coding	hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta
chr5	30400557	30401237	-	30400557;30400689	30400648;30401237	ES	0.5	50	50	ENSMUST00000088117.11	ENSMUSG00000067642.12	Adgrf3	chr5	protein_coding	adhesion G protein-coupled receptor F3
chr5	30452529	30457708	+	30452529;30453518	30453410;30457708	ES	0.5	50	50	ENSMUST00000145167.9	ENSMUSG00000075703.17	Selenoi	chr5	protein_coding	selenoprotein I
chr5	30453518	30461076	+	30453518;30457782	30457708;30461076	ES	0.5	50	50	ENSMUST00000145167.9	ENSMUSG00000075703.17	Selenoi	chr5	protein_coding	selenoprotein I
chr5	30462759	30468069	+	30462818	30468069	A5SS	0.5	50	50	ENSMUST00000145167.9	ENSMUSG00000075703.17	Selenoi	chr5	protein_coding	selenoprotein I
chr5	30468855	30469273	+	30468117	30469273	A5SS	0.5	50	50	ENSMUST00000145167.9	ENSMUSG00000075703.17	Selenoi	chr5	protein_coding	selenoprotein I
chr5	30452529;30453518	30453410;30461076	+	30452529;30457782	30457708;30461076	MXE	0.5	100	100	ENSMUST00000145858.8	ENSMUSG00000075703.17	Selenoi	chr5	protein_coding	selenoprotein I
chr5	30504537	30507745	+	30504537;30506093	30506007;30507745	ES	0.5	50	50	ENSMUST00000101448.5	ENSMUSG00000073102.8	Drc1	chr5	protein_coding	dynein regulatory complex subunit 1
chr5	30499252	30500012	+	30499095	30500012	A5SS	0.5	50	50	ENSMUST00000101448.5	ENSMUSG00000073102.8	Drc1	chr5	protein_coding	dynein regulatory complex subunit 1
chr5	30503291	30504400	+	30503018	30504400	A5SS	0.5	50	50	ENSMUST00000101448.5	ENSMUSG00000073102.8	Drc1	chr5	protein_coding	dynein regulatory complex subunit 1
chr5	30511533	30512483	+	30507867	30512483	A5SS	0.5	50	50	ENSMUST00000101448.5	ENSMUSG00000073102.8	Drc1	chr5	protein_coding	dynein regulatory complex subunit 1
chr5	30564614	30576745	-	30564614;30571893	30571849;30576745	ES	0.5	50	50	ENSMUST00000114747.9	ENSMUSG00000062372.14	Otof	chr5	protein_coding	otoferlin
chr5	30525384;30527622	30527420;30528044	-	30525384	30528044	cassetteExon	0.5	100	100	ENSMUST00000114747.9	ENSMUSG00000062372.14	Otof	chr5	protein_coding	otoferlin
chr5	30537573	30537868	-	30537517	30537868	A3SS	0.33	50	50	ENSMUST00000114747.9	ENSMUSG00000062372.14	Otof	chr5	protein_coding	otoferlin
chr5	30537577	30537868	-	30537517	30537868	A3SS	0.33	50	50	ENSMUST00000114747.9	ENSMUSG00000062372.14	Otof	chr5	protein_coding	otoferlin
chr5	30564614	30565248	-	30564614	30571849	A5SS	0.33	50	50	ENSMUST00000114747.9	ENSMUSG00000062372.14	Otof	chr5	protein_coding	otoferlin
chr5	30537573	30537868	-	30537577	30537868	A3SS	0.33	50	50	ENSMUST00000074171.10	ENSMUSG00000062372.14	Otof	chr5	protein_coding	otoferlin
chr5	30564614	30565248	-	30564614	30576745	A5SS	0.33	50	50	ENSMUST00000074171.10	ENSMUSG00000062372.14	Otof	chr5	protein_coding	otoferlin
chr5	30637999	30639376	+	30637999	30639414	A3SS	0.33	50	50	ENSMUST00000199129.5	ENSMUSG00000029182.11	Fam166c	chr5	protein_coding	family with sequence similarity 166, member C
chr5	30637999	30639420	+	30637999	30639414	A3SS	0.33	50	50	ENSMUST00000199129.5	ENSMUSG00000029182.11	Fam166c	chr5	protein_coding	family with sequence similarity 166, member C
chr5	30637999	30639376	+	30637999	30639420	A3SS	0.33	50	50	ENSMUST00000031078.10	ENSMUSG00000029182.11	Fam166c	chr5	protein_coding	family with sequence similarity 166, member C
chr5	30687073	30698274	+	30687110	30698274	A5SS	0.5	50	50	ENSMUST00000199429.2	ENSMUSG00000106300.2	Gm42765	chr5	lncRNA	predicted gene 42765
chr5	30778881	30779235	+	30745943	30779235	A5SS	0.5	50	50	ENSMUST00000066295.5	ENSMUSG00000049265.9	Kcnk3	chr5	protein_coding	potassium channel, subfamily K, member 3
chr5	30805442	30812839	+	30805442;30812164	30812092;30812839	ES	0.5	50	50	ENSMUST00000062962.12	ENSMUSG00000029175.18	Slc35f6	chr5	protein_coding	solute carrier family 35, member F6
chr5	30812164	30813232	+	30812164;30813010	30812839;30813232	ES	0.5	50	50	ENSMUST00000062962.12	ENSMUSG00000029175.18	Slc35f6	chr5	protein_coding	solute carrier family 35, member F6
chr5	30805442;30808722	30808346;30812092	+	30805442	30812092	cassetteExon	0.5	100	100	ENSMUST00000062962.12	ENSMUSG00000029175.18	Slc35f6	chr5	protein_coding	solute carrier family 35, member F6
chr5	30814188	30814721	+	30814201	30814721	A5SS	0.5	50	50	ENSMUST00000062962.12	ENSMUSG00000029175.18	Slc35f6	chr5	protein_coding	solute carrier family 35, member F6
chr5	30805442;30812164	30812092;30813232	+	30805442;30813010	30812839;30813232	MXE	0.5	100	100	ENSMUST00000143867.8	ENSMUSG00000029175.18	Slc35f6	chr5	protein_coding	solute carrier family 35, member F6
chr5	30805442	30808346	+	30805442	30812839	A3SS	0.33	50	50	ENSMUST00000143867.8	ENSMUSG00000029175.18	Slc35f6	chr5	protein_coding	solute carrier family 35, member F6
chr5	30812164	30813232	+	30812164	30812839	A3SS	0.5	50	50	ENSMUST00000131978.2	ENSMUSG00000029175.18	Slc35f6	chr5	protein_coding	solute carrier family 35, member F6
chr5	30830403	30831382	+	30830403;30830787	30830637;30831382	ES	0.5	50	50	ENSMUST00000144742.6	ENSMUSG00000029177.10	Cenpa	chr5	protein_coding	centromere protein A
chr5	30824457;30827172	30827036;30829808	+	30824457	30829808	cassetteExon	0.5	100	100	ENSMUST00000144742.6	ENSMUSG00000029177.10	Cenpa	chr5	protein_coding	centromere protein A
chr5	30824457	30824925	+	30824457	30829808	A3SS	0.25	50	50	ENSMUST00000144742.6	ENSMUSG00000029177.10	Cenpa	chr5	protein_coding	centromere protein A
chr5	30824457	30826343	+	30824457	30829808	A3SS	0.25	50	50	ENSMUST00000144742.6	ENSMUSG00000029177.10	Cenpa	chr5	protein_coding	centromere protein A
chr5	30830403	30830611	+	30830403	30830637	A3SS	0.33	50	50	ENSMUST00000144742.6	ENSMUSG00000029177.10	Cenpa	chr5	protein_coding	centromere protein A
chr5	30824457;30825031	30824925;30827036	+	30824457	30827036	cassetteExon	0.5	100	100	ENSMUST00000133316.8	ENSMUSG00000029177.10	Cenpa	chr5	protein_coding	centromere protein A
chr5	30824457;30826396	30826343;30827036	+	30824457	30827036	cassetteExon	0.5	100	100	ENSMUST00000133316.8	ENSMUSG00000029177.10	Cenpa	chr5	protein_coding	centromere protein A
chr5	30824457;30825031	30824925;30827036	+	30824457;30826396	30826343;30827036	MXE	0.5	100	100	ENSMUST00000134846.8	ENSMUSG00000029177.10	Cenpa	chr5	protein_coding	centromere protein A
chr5	30826396	30827082	+	30826396	30827036	A3SS	0.5	50	50	ENSMUST00000134846.8	ENSMUSG00000029177.10	Cenpa	chr5	protein_coding	centromere protein A
chr5	30830403	30831382	+	30830787	30831382	A5SS	0.5	50	50	ENSMUST00000150810.8	ENSMUSG00000029177.10	Cenpa	chr5	protein_coding	centromere protein A
chr5	30830403;30830787	30830611;30831382	+	30830403	30831382	cassetteExon	0.5	100	100	ENSMUST00000199320.5	ENSMUSG00000029177.10	Cenpa	chr5	protein_coding	centromere protein A
chr5	30824457	30824925	+	30824457	30826343	A3SS	0.25	50	50	ENSMUST00000031073.10	ENSMUSG00000029177.10	Cenpa	chr5	protein_coding	centromere protein A
chr5	30824457	30827036	+	30824457	30826343	A3SS&ES	0.25	50	50	ENSMUST00000031073.10	ENSMUSG00000029177.10	Cenpa	chr5	protein_coding	centromere protein A
chr5	30902830	30904417	+	30902830	30934664	A3SS	0.5	50	50	ENSMUST00000114729.8	ENSMUSG00000029168.15	Dpysl5	chr5	protein_coding	dihydropyrimidinase-like 5
chr5	30941811	30944047	+	30941811	30946043	A3SS	0.5	50	50	ENSMUST00000114729.8	ENSMUSG00000029168.15	Dpysl5	chr5	protein_coding	dihydropyrimidinase-like 5
chr5	30869513	30902566	+	30869346	30902566	A5SS	0.5	50	50	ENSMUST00000114729.8	ENSMUSG00000029168.15	Dpysl5	chr5	protein_coding	dihydropyrimidinase-like 5
chr5	31011405	31019151	+	30972242	31019151	A5SS	0.5	50	50	ENSMUST00000031058.15	ENSMUSG00000029166.15	Mapre3	chr5	protein_coding	microtubule-associated protein, RP/EB family, member 3
chr5	31020704	31021918	+	31020749	31021918	A5SS	0.5	50	50	ENSMUST00000031058.15	ENSMUSG00000029166.15	Mapre3	chr5	protein_coding	microtubule-associated protein, RP/EB family, member 3
chr5	31028914	31029416	+	31028914;31029199	31029065;31029416	ES	0.5	50	50	ENSMUST00000201203.4	ENSMUSG00000038828.14	Tmem214	chr5	protein_coding	transmembrane protein 214
chr5	31030112;31030248	31030205;31030387	+	31030112	31030387	cassetteExon	0.5	100	100	ENSMUST00000201203.4	ENSMUSG00000038828.14	Tmem214	chr5	protein_coding	transmembrane protein 214
chr5	31028914	31029416	+	31029199	31029416	A5SS	0.5	50	50	ENSMUST00000202050.4	ENSMUSG00000038828.14	Tmem214	chr5	protein_coding	transmembrane protein 214
chr5	31030112	31030387	+	31030248	31030387	A5SS	0.5	50	50	ENSMUST00000202008.2	ENSMUSG00000038828.14	Tmem214	chr5	protein_coding	transmembrane protein 214
chr5	31048114;31048304	31048218;31048404	+	31048114	31048404	cassetteExon	0.5	100	100	ENSMUST00000200695.4	ENSMUSG00000029165.18	Agbl5	chr5	protein_coding	ATP/GTP binding protein-like 5
chr5	31048114	31048450	+	31048114	31048404	A3SS	0.25	50	50	ENSMUST00000200695.4	ENSMUSG00000029165.18	Agbl5	chr5	protein_coding	ATP/GTP binding protein-like 5
chr5	31048114	31048502	+	31048114	31048404	A3SS	0.25	50	50	ENSMUST00000200695.4	ENSMUSG00000029165.18	Agbl5	chr5	protein_coding	ATP/GTP binding protein-like 5
chr5	31046275	31047464	+	31046186	31047464	A5SS	0.25	50	50	ENSMUST00000200695.4	ENSMUSG00000029165.18	Agbl5	chr5	protein_coding	ATP/GTP binding protein-like 5
chr5	31046425	31047464	+	31046186	31047464	A5SS	0.25	50	50	ENSMUST00000200695.4	ENSMUSG00000029165.18	Agbl5	chr5	protein_coding	ATP/GTP binding protein-like 5
chr5	31046868	31047464	+	31046186	31047464	A5SS	0.25	50	50	ENSMUST00000200695.4	ENSMUSG00000029165.18	Agbl5	chr5	protein_coding	ATP/GTP binding protein-like 5
chr5	31052543	31053113	+	31052543	31053110	A3SS	0.5	50	50	ENSMUST00000201167.4	ENSMUSG00000029165.18	Agbl5	chr5	protein_coding	ATP/GTP binding protein-like 5
chr5	31046425	31047464	+	31046275	31047464	A5SS	0.25	50	50	ENSMUST00000201167.4	ENSMUSG00000029165.18	Agbl5	chr5	protein_coding	ATP/GTP binding protein-like 5
chr5	31046868	31047464	+	31046275	31047464	A5SS	0.25	50	50	ENSMUST00000201167.4	ENSMUSG00000029165.18	Agbl5	chr5	protein_coding	ATP/GTP binding protein-like 5
chr5	31062159	31062975	+	31062159;31062499	31062453;31062975	ES	0.5	50	50	ENSMUST00000201917.4	ENSMUSG00000029165.18	Agbl5	chr5	protein_coding	ATP/GTP binding protein-like 5
chr5	31062159	31062362	+	31062159	31062453	A3SS	0.33	50	50	ENSMUST00000201917.4	ENSMUSG00000029165.18	Agbl5	chr5	protein_coding	ATP/GTP binding protein-like 5
chr5	31046868	31047464	+	31046425	31047464	A5SS	0.25	50	50	ENSMUST00000201917.4	ENSMUSG00000029165.18	Agbl5	chr5	protein_coding	ATP/GTP binding protein-like 5
chr5	31048114	31048450	+	31048114	31048218	A3SS&ES	0.25	50	50	ENSMUST00000200990.4	ENSMUSG00000029165.18	Agbl5	chr5	protein_coding	ATP/GTP binding protein-like 5
chr5	31048114	31048502	+	31048114	31048218	A3SS&ES	0.25	50	50	ENSMUST00000200990.4	ENSMUSG00000029165.18	Agbl5	chr5	protein_coding	ATP/GTP binding protein-like 5
chr5	31048114	31048450	+	31048114	31048502	A3SS	0.25	50	50	ENSMUST00000202757.4	ENSMUSG00000029165.18	Agbl5	chr5	protein_coding	ATP/GTP binding protein-like 5
chr5	31062159;31062499	31062362;31062975	+	31062159	31062975	cassetteExon	0.5	100	100	ENSMUST00000201168.4	ENSMUSG00000029165.18	Agbl5	chr5	protein_coding	ATP/GTP binding protein-like 5
chr5	31071388	31072326	+	31071388	31074278	A3SS	0.5	50	50	ENSMUST00000201169.2	ENSMUSG00000029163.10	Emilin1	chr5	protein_coding	elastin microfibril interfacer 1
chr5	31073081	31074278	+	31071388	31074278	A5SS	0.5	50	50	ENSMUST00000201169.2	ENSMUSG00000029163.10	Emilin1	chr5	protein_coding	elastin microfibril interfacer 1
chr5	31082199	31085787	+	31082199;31084500	31084366;31085787	ES	0.33	50	50	ENSMUST00000201621.4	ENSMUSG00000029162.16	Khk	chr5	protein_coding	ketohexokinase
chr5	31082199;31084166	31084032;31084366	+	31082199	31084366	cassetteExon	0.5	100	100	ENSMUST00000201621.4	ENSMUSG00000029162.16	Khk	chr5	protein_coding	ketohexokinase
chr5	31082199;31084166	31084032;31085787	+	31082199;31084500	31084366;31085787	MXE	0.5	100	100	ENSMUST00000201621.4	ENSMUSG00000029162.16	Khk	chr5	protein_coding	ketohexokinase
chr5	31082199;31084166	31084032;31085787	+	31082199	31085787	cassetteExon	0.5	100	100	ENSMUST00000201571.4	ENSMUSG00000029162.16	Khk	chr5	protein_coding	ketohexokinase
chr5	31082199;31084500	31084032;31085787	+	31082199	31085787	cassetteExon	0.5	100	100	ENSMUST00000201571.4	ENSMUSG00000029162.16	Khk	chr5	protein_coding	ketohexokinase
chr5	31084166	31085787	+	31084166;31084500	31084366;31085787	ES	0.33	50	50	ENSMUST00000031053.15	ENSMUSG00000029162.16	Khk	chr5	protein_coding	ketohexokinase
chr5	31115895	31116060	-	31113081	31116060	A3SS	0.5	50	50	ENSMUST00000201821.4	ENSMUSG00000045302.14	Preb	chr5	protein_coding	prolactin regulatory element binding
chr5	31113081	31113274	-	31113081	31116060	A5SS	0.25	50	50	ENSMUST00000201821.4	ENSMUSG00000045302.14	Preb	chr5	protein_coding	prolactin regulatory element binding
chr5	31113081	31113606	-	31113081	31116060	A5SS	0.25	50	50	ENSMUST00000201821.4	ENSMUSG00000045302.14	Preb	chr5	protein_coding	prolactin regulatory element binding
chr5	31113081	31115232	-	31113081	31116060	A5SS	0.25	50	50	ENSMUST00000201821.4	ENSMUSG00000045302.14	Preb	chr5	protein_coding	prolactin regulatory element binding
chr5	31116280	31116510	-	31116280	31116567	A5SS	0.5	50	50	ENSMUST00000201821.4	ENSMUSG00000045302.14	Preb	chr5	protein_coding	prolactin regulatory element binding
chr5	31113081	31113606	-	31113081;31113433	31113274;31113606	ES	0.5	50	50	ENSMUST00000074840.12	ENSMUSG00000045302.14	Preb	chr5	protein_coding	prolactin regulatory element binding
chr5	31113433	31115232	-	31113433;31113678	31113606;31115232	ES	0.33	50	50	ENSMUST00000074840.12	ENSMUSG00000045302.14	Preb	chr5	protein_coding	prolactin regulatory element binding
chr5	31116756	31116848	-	31116756	31117315	A5SS	0.33	50	50	ENSMUST00000074840.12	ENSMUSG00000045302.14	Preb	chr5	protein_coding	prolactin regulatory element binding
chr5	31116756	31117240	-	31116756	31117315	A5SS	0.33	50	50	ENSMUST00000074840.12	ENSMUSG00000045302.14	Preb	chr5	protein_coding	prolactin regulatory element binding
chr5	31113081;31113433	31113274;31115232	-	31113081	31115232	cassetteExon	0.5	100	100	ENSMUST00000201002.4	ENSMUSG00000045302.14	Preb	chr5	protein_coding	prolactin regulatory element binding
chr5	31113081;31113678	31113274;31115232	-	31113081	31115232	cassetteExon	0.5	100	100	ENSMUST00000201002.4	ENSMUSG00000045302.14	Preb	chr5	protein_coding	prolactin regulatory element binding
chr5	31113081;31113678	31113606;31115232	-	31113081	31115232	cassetteExon	0.5	100	100	ENSMUST00000201002.4	ENSMUSG00000045302.14	Preb	chr5	protein_coding	prolactin regulatory element binding
chr5	31113081;31113433	31113274;31115232	-	31113081;31113678	31113606;31115232	MXE	0.5	100	100	ENSMUST00000202567.2	ENSMUSG00000045302.14	Preb	chr5	protein_coding	prolactin regulatory element binding
chr5	31113081	31113606	-	31113081	31113274	5pMXE	0.25	50	50	ENSMUST00000202472.2	ENSMUSG00000045302.14	Preb	chr5	protein_coding	prolactin regulatory element binding
chr5	31113081	31115232	-	31113081	31113274	5pMXE	0.25	50	50	ENSMUST00000202472.2	ENSMUSG00000045302.14	Preb	chr5	protein_coding	prolactin regulatory element binding
chr5	31113081	31113606	-	31113433	31113606	3pMXE	0.5	50	50	ENSMUST00000202904.2	ENSMUSG00000045302.14	Preb	chr5	protein_coding	prolactin regulatory element binding
chr5	31116756	31117240	-	31116756	31116848	5pMXE	0.33	50	50	ENSMUST00000201730.2	ENSMUSG00000045302.14	Preb	chr5	protein_coding	prolactin regulatory element binding
chr5	31197835	31198488	-	31197835;31198142	31198002;31198488	ES	0.5	50	50	ENSMUST00000202520.4	ENSMUSG00000006641.13	Slc5a6	chr5	protein_coding	solute carrier family 5 (sodium-dependent vitamin transporter), member 6
chr5	31201925	31204974	-	31201935	31204974	A3SS	0.5	50	50	ENSMUST00000202520.4	ENSMUSG00000006641.13	Slc5a6	chr5	protein_coding	solute carrier family 5 (sodium-dependent vitamin transporter), member 6
chr5	31205143	31206096	-	31205143	31205516	5pMXE	0.33	50	50	ENSMUST00000114668.7	ENSMUSG00000006641.13	Slc5a6	chr5	protein_coding	solute carrier family 5 (sodium-dependent vitamin transporter), member 6
chr5	31205143	31205310	-	31205143	31205516	A5SS	0.33	50	50	ENSMUST00000114668.7	ENSMUSG00000006641.13	Slc5a6	chr5	protein_coding	solute carrier family 5 (sodium-dependent vitamin transporter), member 6
chr5	31205143	31205310	-	31205143	31206096	A5SS	0.33	50	50	ENSMUST00000080431.8	ENSMUSG00000006641.13	Slc5a6	chr5	protein_coding	solute carrier family 5 (sodium-dependent vitamin transporter), member 6
chr5	31209612	31210107	+	31209612;31209877	31209806;31210107	ES	0.5	50	50	ENSMUST00000201174.4	ENSMUSG00000013622.16	Atraid	chr5	protein_coding	all-trans retinoic acid induced differentiation factor
chr5	31206100	31206806	+	31205776	31206806	A5SS	0.33	50	50	ENSMUST00000201174.4	ENSMUSG00000013622.16	Atraid	chr5	protein_coding	all-trans retinoic acid induced differentiation factor
chr5	31206408	31206806	+	31205776	31206806	A5SS	0.33	50	50	ENSMUST00000201174.4	ENSMUSG00000013622.16	Atraid	chr5	protein_coding	all-trans retinoic acid induced differentiation factor
chr5	31206827	31209541	+	31206924	31209541	A5SS	0.5	50	50	ENSMUST00000201174.4	ENSMUSG00000013622.16	Atraid	chr5	protein_coding	all-trans retinoic acid induced differentiation factor
chr5	31211402	31211659	+	31211402	31211607	A3SS	0.5	50	50	ENSMUST00000201887.4	ENSMUSG00000013622.16	Atraid	chr5	protein_coding	all-trans retinoic acid induced differentiation factor
chr5	31206408	31206806	+	31206100	31206806	A5SS	0.33	50	50	ENSMUST00000201887.4	ENSMUSG00000013622.16	Atraid	chr5	protein_coding	all-trans retinoic acid induced differentiation factor
chr5	31219022	31219545	+	31219022;31219310	31219122;31219545	ES	0.5	50	50	ENSMUST00000013773.12	ENSMUSG00000013629.17	Cad	chr5	protein_coding	carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
chr5	31233636	31234437	+	31233636;31234230	31234018;31234437	ES	0.33	50	50	ENSMUST00000013773.12	ENSMUSG00000013629.17	Cad	chr5	protein_coding	carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
chr5	31232529;31232865	31232815;31233153	+	31232529	31233153	cassetteExon	0.5	100	100	ENSMUST00000013773.12	ENSMUSG00000013629.17	Cad	chr5	protein_coding	carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
chr5	31228016	31229183	+	31228016	31229209	A3SS	0.5	50	50	ENSMUST00000013773.12	ENSMUSG00000013629.17	Cad	chr5	protein_coding	carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
chr5	31223671	31224032	+	31219936	31224032	A5SS	0.5	50	50	ENSMUST00000013773.12	ENSMUSG00000013629.17	Cad	chr5	protein_coding	carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
chr5	31234047	31234437	+	31234230	31234437	A5SS	0.33	50	50	ENSMUST00000013773.12	ENSMUSG00000013629.17	Cad	chr5	protein_coding	carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
chr5	31233636	31234437	+	31233636;31234047	31234018;31234437	ES	0.33	50	50	ENSMUST00000202795.4	ENSMUSG00000013629.17	Cad	chr5	protein_coding	carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
chr5	31219022	31219545	+	31219310	31219545	5pMXE	0.5	50	50	ENSMUST00000201844.2	ENSMUSG00000013629.17	Cad	chr5	protein_coding	carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
chr5	31247581	31251594	-	31247581	31250607	5pMXE	0.25	50	50	ENSMUST00000031037.14	ENSMUSG00000029151.15	Slc30a3	chr5	protein_coding	solute carrier family 30 (zinc transporter), member 3
chr5	31247581	31251828	-	31247581	31250607	5pMXE	0.25	50	50	ENSMUST00000031037.14	ENSMUSG00000029151.15	Slc30a3	chr5	protein_coding	solute carrier family 30 (zinc transporter), member 3
chr5	31247581	31265402	-	31247581	31250607	5pMXE	0.25	50	50	ENSMUST00000031037.14	ENSMUSG00000029151.15	Slc30a3	chr5	protein_coding	solute carrier family 30 (zinc transporter), member 3
chr5	31244962	31245301	-	31244262	31245301	A3SS	0.5	50	50	ENSMUST00000031037.14	ENSMUSG00000029151.15	Slc30a3	chr5	protein_coding	solute carrier family 30 (zinc transporter), member 3
chr5	31247581	31265402	-	31247581;31251900	31251828;31265402	ES	0.5	50	50	ENSMUST00000202740.4	ENSMUSG00000029151.15	Slc30a3	chr5	protein_coding	solute carrier family 30 (zinc transporter), member 3
chr5	31246816	31250607	-	31246816	31246898	A5SS&ES	0.5	50	50	ENSMUST00000202740.4	ENSMUSG00000029151.15	Slc30a3	chr5	protein_coding	solute carrier family 30 (zinc transporter), member 3
chr5	31247581	31251594	-	31247581	31251828	A5SS	0.25	50	50	ENSMUST00000202740.4	ENSMUSG00000029151.15	Slc30a3	chr5	protein_coding	solute carrier family 30 (zinc transporter), member 3
chr5	31251900	31252108	-	31251900	31265402	A5SS	0.5	50	50	ENSMUST00000202740.4	ENSMUSG00000029151.15	Slc30a3	chr5	protein_coding	solute carrier family 30 (zinc transporter), member 3
chr5	31247581	31250607	-	31246816	31250607	A3SS	0.5	50	50	ENSMUST00000202731.2	ENSMUSG00000029151.15	Slc30a3	chr5	protein_coding	solute carrier family 30 (zinc transporter), member 3
chr5	31247581;31251900	31251594;31265402	-	31247581	31265402	cassetteExon	0.5	100	100	ENSMUST00000201396.2	ENSMUSG00000029151.15	Slc30a3	chr5	protein_coding	solute carrier family 30 (zinc transporter), member 3
chr5	31266346;31267052	31266839;31267522	+	31266346	31267522	cassetteExon	0.5	100	100	ENSMUST00000202433.4	ENSMUSG00000053856.8	Dnajc5g	chr5	protein_coding	DnaJ heat shock protein family (Hsp40) member C5 gamma
chr5	31266346;31267052	31266839;31268948	+	31266346;31268523	31267522;31268948	MXE	0.5	100	100	ENSMUST00000202433.4	ENSMUSG00000053856.8	Dnajc5g	chr5	protein_coding	DnaJ heat shock protein family (Hsp40) member C5 gamma
chr5	31265765	31266231	+	31263686	31266231	A5SS	0.5	50	50	ENSMUST00000202433.4	ENSMUSG00000053856.8	Dnajc5g	chr5	protein_coding	DnaJ heat shock protein family (Hsp40) member C5 gamma
chr5	31266346	31267522	+	31266346	31266839	A3SS&ES	0.5	50	50	ENSMUST00000201740.4	ENSMUSG00000053856.8	Dnajc5g	chr5	protein_coding	DnaJ heat shock protein family (Hsp40) member C5 gamma
chr5	31267052	31267522	+	31267052	31268948	A3SS	0.5	50	50	ENSMUST00000201740.4	ENSMUSG00000053856.8	Dnajc5g	chr5	protein_coding	DnaJ heat shock protein family (Hsp40) member C5 gamma
chr5	31268523	31268948	+	31267052	31268948	A5SS	0.5	50	50	ENSMUST00000201740.4	ENSMUSG00000053856.8	Dnajc5g	chr5	protein_coding	DnaJ heat shock protein family (Hsp40) member C5 gamma
chr5	31294557	31294827	+	31294557	31294821	A3SS	0.5	50	50	ENSMUST00000013771.15	ENSMUSG00000062077.15	Trim54	chr5	protein_coding	tripartite motif-containing 54
chr5	31295872	31296141	-	31295877	31296141	A3SS	0.5	50	50	ENSMUST00000043475.7	ENSMUSG00000038676.7	Ucn	chr5	protein_coding	urocortin
chr5	31299194	31302590	-	31299194;31302096	31302044;31302590	ES	0.5	50	50	ENSMUST00000154241.8	ENSMUSG00000107283.4	Mpv17	chr5	protein_coding	MpV17 mitochondrial inner membrane protein
chr5	31302096	31302839	-	31302096;31302622	31302590;31302839	ES	0.5	50	50	ENSMUST00000154241.8	ENSMUSG00000107283.4	Mpv17	chr5	protein_coding	MpV17 mitochondrial inner membrane protein
chr5	31302622	31303028	-	31302622;31302934	31302839;31303028	ES	0.33	50	50	ENSMUST00000154241.8	ENSMUSG00000107283.4	Mpv17	chr5	protein_coding	MpV17 mitochondrial inner membrane protein
chr5	31302909	31303028	-	31302934	31303028	A3SS	0.33	50	50	ENSMUST00000154241.8	ENSMUSG00000107283.4	Mpv17	chr5	protein_coding	MpV17 mitochondrial inner membrane protein
chr5	31308977	31311012	-	31303432	31311012	A3SS	0.5	50	50	ENSMUST00000154241.8	ENSMUSG00000107283.4	Mpv17	chr5	protein_coding	MpV17 mitochondrial inner membrane protein
chr5	31302096	31302238	-	31302096	31302590	A5SS	0.25	50	50	ENSMUST00000154241.8	ENSMUSG00000107283.4	Mpv17	chr5	protein_coding	MpV17 mitochondrial inner membrane protein
chr5	31302096	31302584	-	31302096	31302590	A5SS	0.25	50	50	ENSMUST00000154241.8	ENSMUSG00000107283.4	Mpv17	chr5	protein_coding	MpV17 mitochondrial inner membrane protein
chr5	31311086	31311435	-	31311086	31311535	A5SS	0.33	50	50	ENSMUST00000154241.8	ENSMUSG00000107283.4	Mpv17	chr5	protein_coding	MpV17 mitochondrial inner membrane protein
chr5	31311086	31311452	-	31311086	31311535	A5SS	0.33	50	50	ENSMUST00000154241.8	ENSMUSG00000107283.4	Mpv17	chr5	protein_coding	MpV17 mitochondrial inner membrane protein
chr5	31299194;31302622	31302590;31302839	-	31299194;31302096	31302044;31302839	MXE	0.5	100	100	ENSMUST00000200744.4	ENSMUSG00000107283.4	Mpv17	chr5	protein_coding	MpV17 mitochondrial inner membrane protein
chr5	31302096;31302622	31302238;31302839	-	31302096	31302839	cassetteExon	0.5	100	100	ENSMUST00000200744.4	ENSMUSG00000107283.4	Mpv17	chr5	protein_coding	MpV17 mitochondrial inner membrane protein
chr5	31302096;31302622	31302584;31302839	-	31302096	31302839	cassetteExon	0.5	100	100	ENSMUST00000200744.4	ENSMUSG00000107283.4	Mpv17	chr5	protein_coding	MpV17 mitochondrial inner membrane protein
chr5	31299194;31302622	31302590;31303028	-	31299194;31302934	31302044;31303028	MXE	0.5	100	100	ENSMUST00000200744.4	ENSMUSG00000107283.4	Mpv17	chr5	protein_coding	MpV17 mitochondrial inner membrane protein
chr5	31302096;31302622	31302238;31303028	-	31302096;31302934	31302839;31303028	MXE	0.5	100	100	ENSMUST00000200744.4	ENSMUSG00000107283.4	Mpv17	chr5	protein_coding	MpV17 mitochondrial inner membrane protein
chr5	31302096;31302622	31302584;31303028	-	31302096;31302934	31302839;31303028	MXE	0.5	100	100	ENSMUST00000200744.4	ENSMUSG00000107283.4	Mpv17	chr5	protein_coding	MpV17 mitochondrial inner membrane protein
chr5	31302096;31302622	31302590;31303028	-	31302096;31302934	31302839;31303028	MXE	0.5	100	100	ENSMUST00000200744.4	ENSMUSG00000107283.4	Mpv17	chr5	protein_coding	MpV17 mitochondrial inner membrane protein
chr5	31299194	31302590	-	31299194	31302044	A5SS&ES	0.5	50	50	ENSMUST00000202241.4	ENSMUSG00000107283.4	Mpv17	chr5	protein_coding	MpV17 mitochondrial inner membrane protein
chr5	31302096	31302238	-	31302096	31302584	A5SS	0.25	50	50	ENSMUST00000202241.4	ENSMUSG00000107283.4	Mpv17	chr5	protein_coding	MpV17 mitochondrial inner membrane protein
chr5	31311086	31311435	-	31311086	31311452	A5SS	0.33	50	50	ENSMUST00000201353.4	ENSMUSG00000107283.4	Mpv17	chr5	protein_coding	MpV17 mitochondrial inner membrane protein
chr5	31302096;31302909	31302839;31303028	-	31302096;31302622	31302590;31303028	MXE	0.5	100	100	ENSMUST00000201171.4	ENSMUSG00000107283.4	Mpv17	chr5	protein_coding	MpV17 mitochondrial inner membrane protein
chr5	31302622;31302909	31302839;31303028	-	31302622	31303028	cassetteExon	0.5	100	100	ENSMUST00000201171.4	ENSMUSG00000107283.4	Mpv17	chr5	protein_coding	MpV17 mitochondrial inner membrane protein
chr5	31299194	31302590	-	31302096	31302590	3pMXE	0.5	50	50	ENSMUST00000201491.2	ENSMUSG00000107283.4	Mpv17	chr5	protein_coding	MpV17 mitochondrial inner membrane protein
chr5	31302096	31302839	-	31302622	31302839	3pMXE	0.5	50	50	ENSMUST00000202614.4	ENSMUSG00000107283.4	Mpv17	chr5	protein_coding	MpV17 mitochondrial inner membrane protein
chr5	31302622	31303028	-	31302934	31303028	A3SS	0.33	50	50	ENSMUST00000202203.2	ENSMUSG00000107283.4	Mpv17	chr5	protein_coding	MpV17 mitochondrial inner membrane protein
chr5	31315111	31315487	-	31311634	31315487	A3SS	0.5	50	50	ENSMUST00000136581.3	ENSMUSG00000101678.4	Gm29609	chr5	protein_coding	predicted gene 29609
chr5	31330405	31331576	-	31330405;31331433	31331112;31331576	ES	0.5	50	50	ENSMUST00000101411.6	ENSMUSG00000101678.4	Gm29609	chr5	protein_coding	predicted gene 29609
chr5	31330405;31330855	31330727;31331112	-	31330405	31331112	cassetteExon	0.5	100	100	ENSMUST00000101411.6	ENSMUSG00000101678.4	Gm29609	chr5	protein_coding	predicted gene 29609
chr5	31331839;31333900	31333839;31337228	-	31331839	31337228	cassetteExon	0.5	100	100	ENSMUST00000101411.6	ENSMUSG00000101678.4	Gm29609	chr5	protein_coding	predicted gene 29609
chr5	31331839	31336989	-	31331839	31337228	A5SS	0.33	50	50	ENSMUST00000101411.6	ENSMUSG00000101678.4	Gm29609	chr5	protein_coding	predicted gene 29609
chr5	31331839	31336989	-	31331839	31333839	A5SS&ES	0.33	50	50	ENSMUST00000202639.4	ENSMUSG00000106864.4	Gtf3c2	chr5	protein_coding	general transcription factor IIIC, polypeptide 2, beta
chr5	31330405	31330727	-	31330405	31331576	A5SS	0.33	50	50	ENSMUST00000200871.2	ENSMUSG00000106864.4	Gtf3c2	chr5	protein_coding	general transcription factor IIIC, polypeptide 2, beta
chr5	31330405	31331112	-	31330855	31331112	3pMXE	0.5	50	50	ENSMUST00000201468.4	ENSMUSG00000106864.4	Gtf3c2	chr5	protein_coding	general transcription factor IIIC, polypeptide 2, beta
chr5	31330405	31331576	-	31331433	31331576	3pMXE	0.5	50	50	ENSMUST00000201428.2	ENSMUSG00000106864.4	Gtf3c2	chr5	protein_coding	general transcription factor IIIC, polypeptide 2, beta
chr5	31348269	31348493	-	31348295	31348493	A3SS	0.5	50	50	ENSMUST00000077693.10	ENSMUSG00000029145.13	Eif2b4	chr5	protein_coding	eukaryotic translation initiation factor 2B, subunit 4 delta
chr5	31349628	31349926	-	31349632	31349926	A3SS	0.5	50	50	ENSMUST00000077693.10	ENSMUSG00000029145.13	Eif2b4	chr5	protein_coding	eukaryotic translation initiation factor 2B, subunit 4 delta
chr5	31350114	31350337	-	31349969	31350337	A3SS	0.5	50	50	ENSMUST00000077693.10	ENSMUSG00000029145.13	Eif2b4	chr5	protein_coding	eukaryotic translation initiation factor 2B, subunit 4 delta
chr5	31347090	31347220	-	31347090	31347225	A5SS	0.33	50	50	ENSMUST00000077693.10	ENSMUSG00000029145.13	Eif2b4	chr5	protein_coding	eukaryotic translation initiation factor 2B, subunit 4 delta
chr5	31347090	31347321	-	31347090	31347225	A5SS	0.33	50	50	ENSMUST00000077693.10	ENSMUSG00000029145.13	Eif2b4	chr5	protein_coding	eukaryotic translation initiation factor 2B, subunit 4 delta
chr5	31349969	31350164	-	31349969	31350337	A5SS	0.5	50	50	ENSMUST00000077693.10	ENSMUSG00000029145.13	Eif2b4	chr5	protein_coding	eukaryotic translation initiation factor 2B, subunit 4 delta
chr5	31347090	31347321	-	31347090	31347220	5pMXE	0.33	50	50	ENSMUST00000200977.2	ENSMUSG00000029145.13	Eif2b4	chr5	protein_coding	eukaryotic translation initiation factor 2B, subunit 4 delta
chr5	31350809	31352140	+	31350809;31351287	31351213;31352140	ES	0.5	50	50	ENSMUST00000031029.15	ENSMUSG00000029146.15	Snx17	chr5	protein_coding	sorting nexin 17
chr5	31353608	31354327	+	31353608;31353894	31353825;31354327	ES	0.5	50	50	ENSMUST00000031029.15	ENSMUSG00000029146.15	Snx17	chr5	protein_coding	sorting nexin 17
chr5	31352257;31352623	31352550;31352759	+	31352257	31352759	cassetteExon	0.5	100	100	ENSMUST00000031029.15	ENSMUSG00000029146.15	Snx17	chr5	protein_coding	sorting nexin 17
chr5	31350722	31351213	+	31350809	31351213	A5SS	0.5	50	50	ENSMUST00000031029.15	ENSMUSG00000029146.15	Snx17	chr5	protein_coding	sorting nexin 17
chr5	31353423	31353521	+	31353385	31353521	A5SS	0.5	50	50	ENSMUST00000031029.15	ENSMUSG00000029146.15	Snx17	chr5	protein_coding	sorting nexin 17
chr5	31350809	31352759	+	31350809;31352257	31352140;31352759	ES	0.33	50	50	ENSMUST00000201679.4	ENSMUSG00000029146.15	Snx17	chr5	protein_coding	sorting nexin 17
chr5	31350809	31352140	+	31351287	31352140	A5SS&ES	0.5	50	50	ENSMUST00000201535.4	ENSMUSG00000029146.15	Snx17	chr5	protein_coding	sorting nexin 17
chr5	31350809	31352759	+	31352257	31352759	A5SS&ES	0.33	50	50	ENSMUST00000201535.4	ENSMUSG00000029146.15	Snx17	chr5	protein_coding	sorting nexin 17
chr5	31350809;31352623	31352140;31352759	+	31350809	31352759	cassetteExon	0.5	100	100	ENSMUST00000202124.4	ENSMUSG00000029146.15	Snx17	chr5	protein_coding	sorting nexin 17
chr5	31350809	31351213	+	31350809	31352759	A3SS	0.33	50	50	ENSMUST00000202124.4	ENSMUSG00000029146.15	Snx17	chr5	protein_coding	sorting nexin 17
chr5	31358166	31359331	-	31358166;31359082	31358927;31359331	ES	0.33	50	50	ENSMUST00000114590.8	ENSMUSG00000043059.17	Zfp513	chr5	protein_coding	zinc finger protein 513
chr5	31357150	31357579	-	31357491	31357579	A3SS	0.5	50	50	ENSMUST00000114590.8	ENSMUSG00000043059.17	Zfp513	chr5	protein_coding	zinc finger protein 513
chr5	31359204	31359331	-	31359082	31359331	A3SS	0.33	50	50	ENSMUST00000114590.8	ENSMUSG00000043059.17	Zfp513	chr5	protein_coding	zinc finger protein 513
chr5	31358166	31359331	-	31358166	31358927	A5SS	0.5	50	50	ENSMUST00000031562.11	ENSMUSG00000043059.17	Zfp513	chr5	protein_coding	zinc finger protein 513
chr5	31357730	31357996	-	31357727	31357996	A3SS	0.5	50	50	ENSMUST00000201119.4	ENSMUSG00000043059.17	Zfp513	chr5	protein_coding	zinc finger protein 513
chr5	31358166;31359204	31358927;31359331	-	31358166	31359331	cassetteExon	0.5	100	100	ENSMUST00000202929.2	ENSMUSG00000043059.17	Zfp513	chr5	protein_coding	zinc finger protein 513
chr5	31362473;31362945	31362888;31363382	-	31362473	31363382	cassetteExon	0.5	100	100	ENSMUST00000202294.4	ENSMUSG00000029147.12	Ppm1g	chr5	protein_coding	protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform
chr5	31363797	31364907	-	31363476	31364907	A3SS	0.5	50	50	ENSMUST00000202294.4	ENSMUSG00000029147.12	Ppm1g	chr5	protein_coding	protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform
chr5	31364967	31365357	-	31365039	31365357	A3SS	0.5	50	50	ENSMUST00000202294.4	ENSMUSG00000029147.12	Ppm1g	chr5	protein_coding	protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform
chr5	31403189	31404686	+	31403189;31403689	31403666;31404686	ES	0.5	50	50	ENSMUST00000202576.4	ENSMUSG00000029148.16	Nrbp1	chr5	protein_coding	nuclear receptor binding protein 1
chr5	31398346	31401196	+	31398346	31401107	A3SS	0.33	50	50	ENSMUST00000202576.4	ENSMUSG00000029148.16	Nrbp1	chr5	protein_coding	nuclear receptor binding protein 1
chr5	31398346	31401244	+	31398346	31401107	A3SS	0.33	50	50	ENSMUST00000202576.4	ENSMUSG00000029148.16	Nrbp1	chr5	protein_coding	nuclear receptor binding protein 1
chr5	31398346	31401244	+	31398346	31401196	A3SS	0.33	50	50	ENSMUST00000201259.4	ENSMUSG00000029148.16	Nrbp1	chr5	protein_coding	nuclear receptor binding protein 1
chr5	31410346	31410442	+	31410346	31410438	A3SS	0.5	50	50	ENSMUST00000201333.4	ENSMUSG00000029149.15	Krtcap3	chr5	protein_coding	keratinocyte associated protein 3
chr5	31410351	31410438	+	31410346	31410438	A5SS	0.5	50	50	ENSMUST00000201333.4	ENSMUSG00000029149.15	Krtcap3	chr5	protein_coding	keratinocyte associated protein 3
chr5	31429091	31433196	-	31429091;31429467	31429331;31433196	ES	0.5	50	50	ENSMUST00000041565.11	ENSMUSG00000038564.12	Ift172	chr5	protein_coding	intraflagellar transport 172
chr5	31444025	31444238	-	31444033	31444238	A3SS	0.5	50	50	ENSMUST00000041565.11	ENSMUSG00000038564.12	Ift172	chr5	protein_coding	intraflagellar transport 172
chr5	31429091	31433196	-	31429091	31429331	A5SS&ES	0.5	50	50	ENSMUST00000202585.5	ENSMUSG00000038564.12	Ift172	chr5	protein_coding	intraflagellar transport 172
chr5	31450508	31450758	-	31450508	31450739	A5SS	0.5	50	50	ENSMUST00000202158.4	ENSMUSG00000038552.15	Fndc4	chr5	protein_coding	fibronectin type III domain containing 4
chr5	31455664	31456902	+	31455664;31456126	31456058;31456902	ES	0.5	50	50	ENSMUST00000201166.4	ENSMUSG00000059434.10	Gckr	chr5	protein_coding	glucokinase regulatory protein
chr5	31457989	31459501	+	31457989;31458209	31458156;31459501	ES	0.5	50	50	ENSMUST00000201166.4	ENSMUSG00000059434.10	Gckr	chr5	protein_coding	glucokinase regulatory protein
chr5	31481957	31483701	+	31482065	31483701	A5SS	0.5	50	50	ENSMUST00000201166.4	ENSMUSG00000059434.10	Gckr	chr5	protein_coding	glucokinase regulatory protein
chr5	31455664	31456902	+	31456126	31456902	5pMXE	0.5	50	50	ENSMUST00000202312.4	ENSMUSG00000059434.10	Gckr	chr5	protein_coding	glucokinase regulatory protein
chr5	31622977	31623936	+	31622977;31623680	31623576;31623936	ES	0.5	50	50	ENSMUST00000202061.4	ENSMUSG00000062761.8	Zfp512	chr5	protein_coding	zinc finger protein 512
chr5	31609921	31610499	+	31609921	31622796	A3SS	0.33	50	50	ENSMUST00000202061.4	ENSMUSG00000062761.8	Zfp512	chr5	protein_coding	zinc finger protein 512
chr5	31609921	31622790	+	31609921	31622796	A3SS	0.33	50	50	ENSMUST00000202061.4	ENSMUSG00000062761.8	Zfp512	chr5	protein_coding	zinc finger protein 512
chr5	31609921	31622790	+	31609921;31610557	31610499;31622790	ES	0.5	50	50	ENSMUST00000076264.8	ENSMUSG00000062761.8	Zfp512	chr5	protein_coding	zinc finger protein 512
chr5	31624019	31625498	+	31624019;31624790	31624666;31625498	ES	0.5	50	50	ENSMUST00000076264.8	ENSMUSG00000062761.8	Zfp512	chr5	protein_coding	zinc finger protein 512
chr5	31627800	31630114	+	31627800;31628508	31628341;31630114	ES	0.5	50	50	ENSMUST00000076264.8	ENSMUSG00000062761.8	Zfp512	chr5	protein_coding	zinc finger protein 512
chr5	31609921	31622790	+	31609921	31610499	3pMXE	0.33	50	50	ENSMUST00000201599.2	ENSMUSG00000062761.8	Zfp512	chr5	protein_coding	zinc finger protein 512
chr5	31609921	31622790	+	31610557	31622790	5pMXE	0.5	50	50	ENSMUST00000201945.2	ENSMUSG00000062761.8	Zfp512	chr5	protein_coding	zinc finger protein 512
chr5	31622977	31623936	+	31622977	31623576	3pMXE	0.5	50	50	ENSMUST00000201945.2	ENSMUSG00000062761.8	Zfp512	chr5	protein_coding	zinc finger protein 512
chr5	31652955;31653983	31653923;31654655	+	31652955	31654655	cassetteExon	0.5	100	100	ENSMUST00000076949.13	ENSMUSG00000064037.14	Gpn1	chr5	protein_coding	GPN-loop GTPase 1
chr5	31652609	31652862	+	31652227	31652862	A5SS	0.33	50	50	ENSMUST00000076949.13	ENSMUSG00000064037.14	Gpn1	chr5	protein_coding	GPN-loop GTPase 1
chr5	31652694	31652862	+	31652227	31652862	A5SS	0.33	50	50	ENSMUST00000076949.13	ENSMUSG00000064037.14	Gpn1	chr5	protein_coding	GPN-loop GTPase 1
chr5	31652609	31652862	+	31652694	31652862	A5SS	0.33	50	50	ENSMUST00000201881.4	ENSMUSG00000064037.14	Gpn1	chr5	protein_coding	GPN-loop GTPase 1
chr5	31680605	31684966	-	31680605	31683959	5pMXE	0.5	50	50	ENSMUST00000065388.11	ENSMUSG00000053134.14	Supt7l	chr5	protein_coding	SPT7-like, STAGA complex gamma subunit
chr5	31680503	31683959	-	31680605	31683959	A3SS	0.5	50	50	ENSMUST00000065388.11	ENSMUSG00000053134.14	Supt7l	chr5	protein_coding	SPT7-like, STAGA complex gamma subunit
chr5	31685582	31689317	+	31685582;31688099	31687977;31689317	ES	0.5	50	50	ENSMUST00000114533.9	ENSMUSG00000029141.17	Slc4a1ap	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 1, adaptor protein
chr5	31697841	31705955	+	31697841;31701257	31701014;31705955	ES	0.33	50	50	ENSMUST00000114533.9	ENSMUSG00000029141.17	Slc4a1ap	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 1, adaptor protein
chr5	31701257;31703610	31703524;31705955	+	31701257	31705955	cassetteExon	0.5	100	100	ENSMUST00000114533.9	ENSMUSG00000029141.17	Slc4a1ap	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 1, adaptor protein
chr5	31701257	31705958	+	31701257	31705955	A3SS	0.33	50	50	ENSMUST00000114533.9	ENSMUSG00000029141.17	Slc4a1ap	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 1, adaptor protein
chr5	31707955	31708057	+	31706025	31708057	A5SS	0.5	50	50	ENSMUST00000114533.9	ENSMUSG00000029141.17	Slc4a1ap	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 1, adaptor protein
chr5	31701257	31705958	+	31701257	31703524	A3SS&ES	0.33	50	50	ENSMUST00000202950.4	ENSMUSG00000029141.17	Slc4a1ap	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 1, adaptor protein
chr5	31703610	31705958	+	31703610	31705955	A3SS	0.5	50	50	ENSMUST00000202950.4	ENSMUSG00000029141.17	Slc4a1ap	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 1, adaptor protein
chr5	31703610	31705955	+	31697841	31705955	A5SS	0.33	50	50	ENSMUST00000201925.2	ENSMUSG00000029141.17	Slc4a1ap	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 1, adaptor protein
chr5	31697841	31705955	+	31701257	31705955	5pMXE	0.33	50	50	ENSMUST00000202299.4	ENSMUSG00000029141.17	Slc4a1ap	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 1, adaptor protein
chr5	31701257	31705958	+	31701257;31703610	31703524;31705958	ES	0.5	50	50	ENSMUST00000202273.4	ENSMUSG00000029141.17	Slc4a1ap	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 1, adaptor protein
chr5	31701257	31705955	+	31701257	31703524	A3SS&ES	0.33	50	50	ENSMUST00000202273.4	ENSMUSG00000029141.17	Slc4a1ap	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 1, adaptor protein
chr5	31754365	31773725	+	31754365	31765567	A3SS&ES	0.5	50	50	ENSMUST00000201999.4	ENSMUSG00000106918.4	Mrpl33	chr5	protein_coding	mitochondrial ribosomal protein L33
chr5	31787064	31798949	+	31765694	31798949	A5SS	0.5	50	50	ENSMUST00000201999.4	ENSMUSG00000106918.4	Mrpl33	chr5	protein_coding	mitochondrial ribosomal protein L33
chr5	31807828	31811812	+	31800384	31811812	A5SS	0.5	50	50	ENSMUST00000201999.4	ENSMUSG00000106918.4	Mrpl33	chr5	protein_coding	mitochondrial ribosomal protein L33
chr5	31773831	31779721	+	31756175	31779721	A5SS	0.5	50	50	ENSMUST00000202953.2	ENSMUSG00000106918.4	Mrpl33	chr5	protein_coding	mitochondrial ribosomal protein L33
chr5	31771366	31773725	+	31771366;31771965	31771947;31773725	ES	0.5	50	50	ENSMUST00000031024.14	ENSMUSG00000106918.4	Mrpl33	chr5	protein_coding	mitochondrial ribosomal protein L33
chr5	31773831	31786960	+	31773831	31779721	3pMXE	0.25	50	50	ENSMUST00000031024.14	ENSMUSG00000106918.4	Mrpl33	chr5	protein_coding	mitochondrial ribosomal protein L33
chr5	31773831	31807647	+	31773831	31779721	3pMXE	0.25	50	50	ENSMUST00000031024.14	ENSMUSG00000106918.4	Mrpl33	chr5	protein_coding	mitochondrial ribosomal protein L33
chr5	31773831	31859170	+	31773831	31779721	3pMXE	0.25	50	50	ENSMUST00000031024.14	ENSMUSG00000106918.4	Mrpl33	chr5	protein_coding	mitochondrial ribosomal protein L33
chr5	31771611	31771947	+	31771366	31771947	A5SS	0.5	50	50	ENSMUST00000031024.14	ENSMUSG00000106918.4	Mrpl33	chr5	protein_coding	mitochondrial ribosomal protein L33
chr5	31787064	31807647	+	31787064	31798949	3pMXE	0.5	50	50	ENSMUST00000202655.4	ENSMUSG00000106918.4	Mrpl33	chr5	protein_coding	mitochondrial ribosomal protein L33
chr5	31771366;31773831	31773725;31786960	+	31771366	31786960	cassetteExon	0.5	100	100	ENSMUST00000202655.4	ENSMUSG00000106918.4	Mrpl33	chr5	protein_coding	mitochondrial ribosomal protein L33
chr5	31771366	31771947	+	31771366	31786960	A3SS	0.33	50	50	ENSMUST00000202655.4	ENSMUSG00000106918.4	Mrpl33	chr5	protein_coding	mitochondrial ribosomal protein L33
chr5	31754365	31773725	+	31771366	31773725	5pMXE	0.33	50	50	ENSMUST00000202243.4	ENSMUSG00000106918.4	Mrpl33	chr5	protein_coding	mitochondrial ribosomal protein L33
chr5	31773831	31807647	+	31773831;31787064	31786960;31807647	ES	0.5	50	50	ENSMUST00000202243.4	ENSMUSG00000106918.4	Mrpl33	chr5	protein_coding	mitochondrial ribosomal protein L33
chr5	31771366;31787064	31786960;31807647	+	31771366;31773831	31771947;31807647	MXE	0.5	100	100	ENSMUST00000201910.4	ENSMUSG00000106918.4	Mrpl33	chr5	protein_coding	mitochondrial ribosomal protein L33
chr5	31812864	31815129	+	31812864	31820234	A3SS	0.5	50	50	ENSMUST00000201910.4	ENSMUSG00000106918.4	Mrpl33	chr5	protein_coding	mitochondrial ribosomal protein L33
chr5	31819558	31820234	+	31812864	31820234	A5SS	0.5	50	50	ENSMUST00000201910.4	ENSMUSG00000106918.4	Mrpl33	chr5	protein_coding	mitochondrial ribosomal protein L33
chr5	31771366	31773725	+	31771965	31773725	A5SS&ES	0.5	50	50	ENSMUST00000201483.4	ENSMUSG00000106918.4	Mrpl33	chr5	protein_coding	mitochondrial ribosomal protein L33
chr5	31754365	31773725	+	31771965	31773725	5pMXE	0.33	50	50	ENSMUST00000201923.2	ENSMUSG00000106918.4	Mrpl33	chr5	protein_coding	mitochondrial ribosomal protein L33
chr5	31773831	31786960	+	31773831	31859170	A3SS	0.25	50	50	ENSMUST00000200694.4	ENSMUSG00000105617.5	Gm43809	chr5	lncRNA	predicted gene 43809
chr5	31773831	31807647	+	31773831	31859170	A3SS	0.25	50	50	ENSMUST00000200694.4	ENSMUSG00000105617.5	Gm43809	chr5	lncRNA	predicted gene 43809
chr5	31855341	31859170	+	31773831	31859170	A5SS	0.33	50	50	ENSMUST00000200694.4	ENSMUSG00000105617.5	Gm43809	chr5	lncRNA	predicted gene 43809
chr5	31855421	31859170	+	31773831	31859170	A5SS	0.33	50	50	ENSMUST00000200694.4	ENSMUSG00000105617.5	Gm43809	chr5	lncRNA	predicted gene 43809
chr5	31782000	31805065	-	31782000	31797561	5pMXE	0.5	50	50	ENSMUST00000201744.2	ENSMUSG00000029136.10	Rbks	chr5	protein_coding	ribokinase
chr5	31830789	31843313	-	31830789	31854854	A5SS	0.5	50	50	ENSMUST00000031018.10	ENSMUSG00000029136.10	Rbks	chr5	protein_coding	ribokinase
chr5	31978016	32058399	+	31978016;31988503	31988429;32058399	ES	0.5	50	50	ENSMUST00000201352.4	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	32058508	32162054	+	32058508;32158804	32158705;32162054	ES	0.5	50	50	ENSMUST00000201352.4	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	32162124	32214855	+	32162124;32164661	32164579;32214855	ES	0.33	50	50	ENSMUST00000201352.4	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	31855421;31859447	31859375;31888311	+	31855421;31859321	31859170;31888311	MXE	0.5	100	100	ENSMUST00000201352.4	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	31855421;31859447	31859375;31942922	+	31855421;31888387	31859170;31942922	MXE	0.5	100	100	ENSMUST00000201352.4	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	31859321;31887899	31887812;31888311	+	31859321	31888311	cassetteExon	0.5	100	100	ENSMUST00000201352.4	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	31888387;31924131	31923988;31942922	+	31888387	31942922	cassetteExon	0.5	100	100	ENSMUST00000201352.4	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	32215008;32222179	32222110;32241925	+	32215008	32241925	cassetteExon	0.5	100	100	ENSMUST00000201352.4	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	31859321	31864781	+	31859321	31888311	A3SS	0.33	50	50	ENSMUST00000201352.4	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	31855341	31859170	+	31855421	31859170	A5SS	0.33	50	50	ENSMUST00000201352.4	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	31942804	31942922	+	31888387	31942922	A5SS	0.25	50	50	ENSMUST00000201352.4	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	32203371	32214855	+	32164661	32214855	A5SS	0.33	50	50	ENSMUST00000201352.4	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	32237450	32241925	+	32215008	32241925	A5SS	0.33	50	50	ENSMUST00000201352.4	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	31859447	31888311	+	31859321	31888311	A5SS	0.33	50	50	ENSMUST00000202815.4	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	31859321	31887812	+	31859321	31864781	3pMXE	0.33	50	50	ENSMUST00000201592.4	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	31855421	31859375	+	31855421	31859170	A3SS&ES	0.5	50	50	ENSMUST00000201592.4	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	32058508	32162054	+	32058508	32158705	3pMXE	0.5	50	50	ENSMUST00000201107.4	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	31978016	32058399	+	31978016	31988429	3pMXE	0.5	50	50	ENSMUST00000201202.4	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	32237450	32241925	+	32222179	32241925	A5SS	0.33	50	50	ENSMUST00000114515.9	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	31855421	31859375	+	31855421;31859271	31859170;31859375	ES	0.5	50	50	ENSMUST00000063813.11	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	31859447	31888311	+	31859447;31887899	31887812;31888311	ES	0.33	50	50	ENSMUST00000063813.11	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	31859321	31887812	+	31859447	31887812	A5SS&ES	0.5	50	50	ENSMUST00000063813.11	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	31859321	31888311	+	31887899	31888311	A5SS&ES	0.33	50	50	ENSMUST00000063813.11	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	31855421;31859321	31859170;31887812	+	31855421;31859447	31859375;31887812	MXE	0.5	100	100	ENSMUST00000071531.12	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	31855421;31859321	31859170;31888311	+	31855421;31887899	31859375;31888311	MXE	0.5	100	100	ENSMUST00000071531.12	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	31859447	31942922	+	31859447;31888387	31888311;31942922	ES	0.25	50	50	ENSMUST00000131995.7	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	31859447	31887812	+	31859447	31942922	A3SS	0.33	50	50	ENSMUST00000114507.10	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	31924131	31942922	+	31859447	31942922	A5SS	0.25	50	50	ENSMUST00000114507.10	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	31942804	31942922	+	31859447	31942922	A5SS	0.25	50	50	ENSMUST00000114507.10	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	31855421;31859447	31859375;31888311	+	31855421;31887899	31859170;31888311	MXE	0.5	100	100	ENSMUST00000202293.4	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	31855421;31859447	31859375;31942922	+	31855421;31924131	31859170;31942922	MXE	0.5	100	100	ENSMUST00000202293.4	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	31942804	31942922	+	31924131	31942922	A5SS	0.25	50	50	ENSMUST00000202293.4	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	31859447	31942922	+	31888387	31942922	A5SS&ES	0.25	50	50	ENSMUST00000200705.2	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	32203371	32214855	+	32162124	32214855	A5SS	0.33	50	50	ENSMUST00000200705.2	ENSMUSG00000052139.19	Babam2	chr5	protein_coding	BRISC and BRCA1 A complex member 2
chr5	32390135;32404904	32404699;32419706	+	32390135	32419706	cassetteExon	0.5	100	100	ENSMUST00000202886.4	ENSMUSG00000029134.15	Plb1	chr5	protein_coding	phospholipase B1
chr5	32404904	32419706	+	32404904	32407334	3pMXE	0.5	50	50	ENSMUST00000200878.4	ENSMUSG00000029134.15	Plb1	chr5	protein_coding	phospholipase B1
chr5	32396585	32404699	+	32390135	32404699	A5SS	0.5	50	50	ENSMUST00000200878.4	ENSMUSG00000029134.15	Plb1	chr5	protein_coding	phospholipase B1
chr5	32390135	32419706	+	32404904	32419706	5pMXE	0.5	50	50	ENSMUST00000101376.3	ENSMUSG00000029134.15	Plb1	chr5	protein_coding	phospholipase B1
chr5	32547909	32550407	-	32547909	32555107	A5SS	0.5	50	50	ENSMUST00000201290.2	ENSMUSG00000107036.2	Gm7596	chr5	lncRNA	predicted gene 7596
chr5	32640808;32641122	32640978;32642603	+	32640808	32642603	cassetteExon	0.5	100	100	ENSMUST00000015100.15	ENSMUSG00000014956.16	Ppp1cb	chr5	protein_coding	protein phosphatase 1 catalytic subunit beta
chr5	32616751	32640770	+	32616751	32635410	A3SS&ES	0.5	50	50	ENSMUST00000015100.15	ENSMUSG00000014956.16	Ppp1cb	chr5	protein_coding	protein phosphatase 1 catalytic subunit beta
chr5	32648533	32649674	+	32648533	32673750	A3SS	0.5	50	50	ENSMUST00000201360.4	ENSMUSG00000014956.16	Ppp1cb	chr5	protein_coding	protein phosphatase 1 catalytic subunit beta
chr5	32642674	32643225	+	32642674	32648298	A3SS	0.5	50	50	ENSMUST00000202078.2	ENSMUSG00000014956.16	Ppp1cb	chr5	protein_coding	protein phosphatase 1 catalytic subunit beta
chr5	32645049	32648298	+	32642674	32648298	A5SS	0.5	50	50	ENSMUST00000202078.2	ENSMUSG00000014956.16	Ppp1cb	chr5	protein_coding	protein phosphatase 1 catalytic subunit beta
chr5	32709954	32711173	+	32709954;32710155	32710104;32711173	ES	0.5	50	50	ENSMUST00000200976.4	ENSMUSG00000106835.4	Gm43812	chr5	transcribed_unprocessed_pseudogene	predicted gene 43812
chr5	32769181	32797675	+	32768719	32797675	A5SS	0.5	50	50	ENSMUST00000202543.4	ENSMUSG00000014932.16	Yes1	chr5	protein_coding	YES proto-oncogene 1, Src family tyrosine kinase
chr5	32877868;32878779	32878698;32879034	+	32877868	32879034	cassetteExon	0.5	100	100	ENSMUST00000202748.4	ENSMUSG00000082305.5	Gm2420	chr5	transcribed_unprocessed_pseudogene	predicted gene 2420
chr5	32879802;32880329	32880234;32880687	+	32879802	32880687	cassetteExon	0.5	100	100	ENSMUST00000119864.5	ENSMUSG00000082305.5	Gm2420	chr5	transcribed_unprocessed_pseudogene	predicted gene 2420
chr5	32891067	32891193	+	32891063	32891193	A5SS	0.5	50	50	ENSMUST00000119864.5	ENSMUSG00000082305.5	Gm2420	chr5	transcribed_unprocessed_pseudogene	predicted gene 2420
chr5	32894798	32895732	-	32894798;32895376	32895330;32895732	ES	0.33	50	50	ENSMUST00000142779.8	ENSMUSG00000023452.20	Pisd	chr5	protein_coding	phosphatidylserine decarboxylase
chr5	32922292	32942893	-	32922292;32931810	32931740;32942893	ES	0.5	50	50	ENSMUST00000142779.8	ENSMUSG00000023452.20	Pisd	chr5	protein_coding	phosphatidylserine decarboxylase
chr5	32931810	32952934	-	32931810	32942893	5pMXE	0.5	50	50	ENSMUST00000142779.8	ENSMUSG00000023452.20	Pisd	chr5	protein_coding	phosphatidylserine decarboxylase
chr5	32895490	32895732	-	32895376	32895732	A3SS	0.33	50	50	ENSMUST00000142779.8	ENSMUSG00000023452.20	Pisd	chr5	protein_coding	phosphatidylserine decarboxylase
chr5	32896264	32896528	-	32896264	32896481	A5SS	0.5	50	50	ENSMUST00000142779.8	ENSMUSG00000023452.20	Pisd	chr5	protein_coding	phosphatidylserine decarboxylase
chr5	32896717	32897968	-	32896717	32922117	A5SS	0.33	50	50	ENSMUST00000142779.8	ENSMUSG00000023452.20	Pisd	chr5	protein_coding	phosphatidylserine decarboxylase
chr5	32896717	32899554	-	32896717	32922117	A5SS	0.33	50	50	ENSMUST00000142779.8	ENSMUSG00000023452.20	Pisd	chr5	protein_coding	phosphatidylserine decarboxylase
chr5	32894798	32895732	-	32894798;32895490	32895330;32895732	ES	0.33	50	50	ENSMUST00000061895.16	ENSMUSG00000023452.20	Pisd	chr5	protein_coding	phosphatidylserine decarboxylase
chr5	32896717	32899554	-	32896717;32898133	32897968;32899554	ES	0.33	50	50	ENSMUST00000202283.5	ENSMUSG00000023452.20	Pisd	chr5	protein_coding	phosphatidylserine decarboxylase
chr5	32898133;32898476	32898389;32899554	-	32898133	32899554	cassetteExon	0.5	100	100	ENSMUST00000202283.5	ENSMUSG00000023452.20	Pisd	chr5	protein_coding	phosphatidylserine decarboxylase
chr5	32894798	32895732	-	32895490	32895732	A3SS&ES	0.33	50	50	ENSMUST00000202283.5	ENSMUSG00000023452.20	Pisd	chr5	protein_coding	phosphatidylserine decarboxylase
chr5	32896446	32896528	-	32896264	32896528	A3SS	0.5	50	50	ENSMUST00000202283.5	ENSMUSG00000023452.20	Pisd	chr5	protein_coding	phosphatidylserine decarboxylase
chr5	32899819	32903527	-	32899819;32903026	32902813;32903527	ES	0.5	50	50	ENSMUST00000120591.8	ENSMUSG00000023452.20	Pisd	chr5	protein_coding	phosphatidylserine decarboxylase
chr5	32898476	32899554	-	32896717	32899554	A3SS	0.33	50	50	ENSMUST00000197787.5	ENSMUSG00000023452.20	Pisd	chr5	protein_coding	phosphatidylserine decarboxylase
chr5	32896717	32899554	-	32896717	32897968	5pMXE	0.33	50	50	ENSMUST00000202641.2	ENSMUSG00000023452.20	Pisd	chr5	protein_coding	phosphatidylserine decarboxylase
chr5	32953005	32977937	-	32953005;32977316	32977210;32977937	ES	0.5	50	50	ENSMUST00000144673.3	ENSMUSG00000093574.2	Gm20671	chr5	protein_coding	predicted gene 20671
chr5	32951176	32952934	-	32931810	32952934	A3SS	0.5	50	50	ENSMUST00000144673.3	ENSMUSG00000093574.2	Gm20671	chr5	protein_coding	predicted gene 20671
chr5	32922292	32942893	-	32922292	32931740	A5SS&ES	0.5	50	50	ENSMUST00000144673.3	ENSMUSG00000093574.2	Gm20671	chr5	protein_coding	predicted gene 20671
chr5	33009342	33011437	-	32993032	33011437	A3SS	0.5	50	50	ENSMUST00000130134.3	ENSMUSG00000054280.15	Prr14l	chr5	protein_coding	proline rich 14-like
chr5	32993032	33001388	-	32993032	33011437	A5SS	0.5	50	50	ENSMUST00000130134.3	ENSMUSG00000054280.15	Prr14l	chr5	protein_coding	proline rich 14-like
chr5	33036021	33050719	+	33036021	33044323	3pMXE	0.5	50	50	ENSMUST00000149350.8	ENSMUSG00000037426.19	Depdc5	chr5	protein_coding	DEP domain containing 5
chr5	33021087	33021502	+	33021087	33021927	A3SS	0.33	50	50	ENSMUST00000149350.8	ENSMUSG00000037426.19	Depdc5	chr5	protein_coding	DEP domain containing 5
chr5	33021087	33021921	+	33021087	33021927	A3SS	0.33	50	50	ENSMUST00000149350.8	ENSMUSG00000037426.19	Depdc5	chr5	protein_coding	DEP domain containing 5
chr5	33036021	33050719	+	33036021;33044392	33044323;33050719	ES	0.5	50	50	ENSMUST00000118698.8	ENSMUSG00000037426.19	Depdc5	chr5	protein_coding	DEP domain containing 5
chr5	33021087;33021656	33021502;33021921	+	33021087	33021921	cassetteExon	0.5	100	100	ENSMUST00000118698.8	ENSMUSG00000037426.19	Depdc5	chr5	protein_coding	DEP domain containing 5
chr5	33021165	33021921	+	33021087	33021921	A5SS	0.33	50	50	ENSMUST00000118698.8	ENSMUSG00000037426.19	Depdc5	chr5	protein_coding	DEP domain containing 5
chr5	33021656	33021924	+	33021656	33021921	A3SS	0.5	50	50	ENSMUST00000150130.8	ENSMUSG00000037426.19	Depdc5	chr5	protein_coding	DEP domain containing 5
chr5	33021165	33021502	+	33021087	33021502	A5SS	0.5	50	50	ENSMUST00000150130.8	ENSMUSG00000037426.19	Depdc5	chr5	protein_coding	DEP domain containing 5
chr5	33021165	33021921	+	33021656	33021921	A5SS&ES	0.33	50	50	ENSMUST00000150130.8	ENSMUSG00000037426.19	Depdc5	chr5	protein_coding	DEP domain containing 5
chr5	33113302	33116625	+	33113302	33113473	3pMXE	0.25	50	50	ENSMUST00000049780.13	ENSMUSG00000037426.19	Depdc5	chr5	protein_coding	DEP domain containing 5
chr5	33113302	33121801	+	33113302	33113473	3pMXE	0.25	50	50	ENSMUST00000049780.13	ENSMUSG00000037426.19	Depdc5	chr5	protein_coding	DEP domain containing 5
chr5	33113302	33121976	+	33113302	33113473	3pMXE	0.25	50	50	ENSMUST00000049780.13	ENSMUSG00000037426.19	Depdc5	chr5	protein_coding	DEP domain containing 5
chr5	33021165;33021656	33021354;33021921	+	33021165	33021921	cassetteExon	0.5	100	100	ENSMUST00000049780.13	ENSMUSG00000037426.19	Depdc5	chr5	protein_coding	DEP domain containing 5
chr5	33021165;33021656	33021502;33021921	+	33021165	33021921	cassetteExon	0.5	100	100	ENSMUST00000049780.13	ENSMUSG00000037426.19	Depdc5	chr5	protein_coding	DEP domain containing 5
chr5	33091359	33094865	+	33091359	33094892	A3SS	0.33	50	50	ENSMUST00000049780.13	ENSMUSG00000037426.19	Depdc5	chr5	protein_coding	DEP domain containing 5
chr5	33091359	33094987	+	33091359	33094892	A3SS	0.33	50	50	ENSMUST00000049780.13	ENSMUSG00000037426.19	Depdc5	chr5	protein_coding	DEP domain containing 5
chr5	33104111	33113200	+	33104111	33113197	A3SS	0.5	50	50	ENSMUST00000049780.13	ENSMUSG00000037426.19	Depdc5	chr5	protein_coding	DEP domain containing 5
chr5	33061888	33067801	+	33061876	33067801	A5SS	0.5	50	50	ENSMUST00000049780.13	ENSMUSG00000037426.19	Depdc5	chr5	protein_coding	DEP domain containing 5
chr5	33113302	33121976	+	33113302;33116690	33116625;33121976	ES	0.33	50	50	ENSMUST00000087897.11	ENSMUSG00000037426.19	Depdc5	chr5	protein_coding	DEP domain containing 5
chr5	33126115	33132661	+	33126115;33131269	33131161;33132661	ES	0.5	50	50	ENSMUST00000087897.11	ENSMUSG00000037426.19	Depdc5	chr5	protein_coding	DEP domain containing 5
chr5	33113302;33121845	33121801;33121976	+	33113302;33116690	33116625;33121976	MXE	0.5	100	100	ENSMUST00000087897.11	ENSMUSG00000037426.19	Depdc5	chr5	protein_coding	DEP domain containing 5
chr5	33141374;33144340	33144280;33148086	+	33141374	33148086	cassetteExon	0.5	100	100	ENSMUST00000087897.11	ENSMUSG00000037426.19	Depdc5	chr5	protein_coding	DEP domain containing 5
chr5	33021165	33021502	+	33021165	33021354	A3SS	0.33	50	50	ENSMUST00000087897.11	ENSMUSG00000037426.19	Depdc5	chr5	protein_coding	DEP domain containing 5
chr5	33091359	33094987	+	33091359	33094865	A3SS	0.33	50	50	ENSMUST00000087897.11	ENSMUSG00000037426.19	Depdc5	chr5	protein_coding	DEP domain containing 5
chr5	33021087	33021921	+	33021656	33021921	A5SS&ES	0.33	50	50	ENSMUST00000087897.11	ENSMUSG00000037426.19	Depdc5	chr5	protein_coding	DEP domain containing 5
chr5	33113302;33121845	33121801;33121976	+	33113302	33121976	cassetteExon	0.5	100	100	ENSMUST00000120902.8	ENSMUSG00000037426.19	Depdc5	chr5	protein_coding	DEP domain containing 5
chr5	33081709	33084234	+	33081709	33091294	A3SS	0.5	50	50	ENSMUST00000124780.8	ENSMUSG00000037426.19	Depdc5	chr5	protein_coding	DEP domain containing 5
chr5	33085283	33091294	+	33081709	33091294	A5SS	0.5	50	50	ENSMUST00000124780.8	ENSMUSG00000037426.19	Depdc5	chr5	protein_coding	DEP domain containing 5
chr5	33126115	33132661	+	33126115	33131161	3pMXE	0.5	50	50	ENSMUST00000127560.2	ENSMUSG00000037426.19	Depdc5	chr5	protein_coding	DEP domain containing 5
chr5	33177573	33183886	+	33176498	33183886	A5SS	0.33	50	50	ENSMUST00000019109.8	ENSMUSG00000018965.12	Ywhah	chr5	protein_coding	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide
chr5	33179175	33183886	+	33176498	33183886	A5SS	0.33	50	50	ENSMUST00000019109.8	ENSMUSG00000018965.12	Ywhah	chr5	protein_coding	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide
chr5	33179175	33183886	+	33177573	33183886	A5SS	0.33	50	50	ENSMUST00000138261.2	ENSMUSG00000018965.12	Ywhah	chr5	protein_coding	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide
chr5	33374807;33375004	33374917;33375292	-	33374807	33375292	cassetteExon	0.5	100	100	ENSMUST00000046186.8	ENSMUSG00000037379.8	Spon2	chr5	protein_coding	spondin 2, extracellular matrix protein
chr5	33416688	33424227	-	33416688;33418497	33418353;33424227	ES	0.5	50	50	ENSMUST00000079746.10	ENSMUSG00000037373.13	Ctbp1	chr5	protein_coding	C-terminal binding protein 1
chr5	33418497	33432123	-	33418497;33424381	33424227;33432123	ES	0.33	50	50	ENSMUST00000079746.10	ENSMUSG00000037373.13	Ctbp1	chr5	protein_coding	C-terminal binding protein 1
chr5	33424381;33426978	33426786;33432123	-	33424381	33432123	cassetteExon	0.5	100	100	ENSMUST00000079746.10	ENSMUSG00000037373.13	Ctbp1	chr5	protein_coding	C-terminal binding protein 1
chr5	33406027	33406451	-	33406030	33406451	A3SS	0.5	50	50	ENSMUST00000079746.10	ENSMUSG00000037373.13	Ctbp1	chr5	protein_coding	C-terminal binding protein 1
chr5	33416688;33424381	33424227;33432123	-	33416688;33418497	33418353;33432123	MXE	0.5	100	100	ENSMUST00000201575.4	ENSMUSG00000037373.13	Ctbp1	chr5	protein_coding	C-terminal binding protein 1
chr5	33426978	33432123	-	33418497	33432123	A3SS	0.33	50	50	ENSMUST00000201575.4	ENSMUSG00000037373.13	Ctbp1	chr5	protein_coding	C-terminal binding protein 1
chr5	33426978	33431737	-	33426978	33432123	A5SS	0.33	50	50	ENSMUST00000202868.4	ENSMUSG00000037373.13	Ctbp1	chr5	protein_coding	C-terminal binding protein 1
chr5	33426978	33431892	-	33426978	33432123	A5SS	0.33	50	50	ENSMUST00000202868.4	ENSMUSG00000037373.13	Ctbp1	chr5	protein_coding	C-terminal binding protein 1
chr5	33424381	33432123	-	33424381	33426786	5pMXE	0.5	50	50	ENSMUST00000201275.4	ENSMUSG00000037373.13	Ctbp1	chr5	protein_coding	C-terminal binding protein 1
chr5	33416688	33424227	-	33418497	33424227	3pMXE	0.5	50	50	ENSMUST00000202632.2	ENSMUSG00000037373.13	Ctbp1	chr5	protein_coding	C-terminal binding protein 1
chr5	33426978	33431737	-	33426978	33431892	A5SS	0.33	50	50	ENSMUST00000200899.4	ENSMUSG00000037373.13	Ctbp1	chr5	protein_coding	C-terminal binding protein 1
chr5	33492989;33502226	33502171;33515784	+	33492989	33515784	cassetteExon	0.5	100	100	ENSMUST00000114449.7	ENSMUSG00000079562.8	Maea	chr5	protein_coding	macrophage erythroblast attacher
chr5	33515966	33517714	+	33515966	33517696	A3SS	0.5	50	50	ENSMUST00000114449.7	ENSMUSG00000079562.8	Maea	chr5	protein_coding	macrophage erythroblast attacher
chr5	33493755	33515784	+	33492989	33515784	A5SS	0.33	50	50	ENSMUST00000114449.7	ENSMUSG00000079562.8	Maea	chr5	protein_coding	macrophage erythroblast attacher
chr5	33493755	33515784	+	33502226	33515784	A5SS&ES	0.33	50	50	ENSMUST00000200882.3	ENSMUSG00000079562.8	Maea	chr5	protein_coding	macrophage erythroblast attacher
chr5	33566893	33568307	+	33566893	33568203	A3SS	0.5	50	50	ENSMUST00000087864.12	ENSMUSG00000037355.15	Uvssa	chr5	protein_coding	UV stimulated scaffold protein A
chr5	33536261	33536570	+	33536346	33536570	A5SS	0.5	50	50	ENSMUST00000087864.12	ENSMUSG00000037355.15	Uvssa	chr5	protein_coding	UV stimulated scaffold protein A
chr5	33772178	33786681	-	33772178;33786321	33786197;33786681	ES	0.5	50	50	ENSMUST00000065119.15	ENSMUSG00000037339.18	Fam53a	chr5	protein_coding	family with sequence similarity 53, member A
chr5	33765571;33765776	33765675;33767776	-	33765571	33767776	cassetteExon	0.5	100	100	ENSMUST00000065119.15	ENSMUSG00000037339.18	Fam53a	chr5	protein_coding	family with sequence similarity 53, member A
chr5	33765571;33765833	33765675;33767776	-	33765571	33767776	cassetteExon	0.5	100	100	ENSMUST00000065119.15	ENSMUSG00000037339.18	Fam53a	chr5	protein_coding	family with sequence similarity 53, member A
chr5	33772178	33786193	-	33772178	33786197	A5SS	0.33	50	50	ENSMUST00000065119.15	ENSMUSG00000037339.18	Fam53a	chr5	protein_coding	family with sequence similarity 53, member A
chr5	33772178	33786681	-	33772178	33786197	5pMXE	0.33	50	50	ENSMUST00000065162.11	ENSMUSG00000037339.18	Fam53a	chr5	protein_coding	family with sequence similarity 53, member A
chr5	33765776	33767776	-	33765833	33767776	A3SS	0.33	50	50	ENSMUST00000150033.8	ENSMUSG00000037339.18	Fam53a	chr5	protein_coding	family with sequence similarity 53, member A
chr5	33772178;33786321	33786193;33786681	-	33772178	33786681	cassetteExon	0.5	100	100	ENSMUST00000137705.8	ENSMUSG00000037339.18	Fam53a	chr5	protein_coding	family with sequence similarity 53, member A
chr5	33765571	33767776	-	33765776	33767776	3pMXE	0.33	50	50	ENSMUST00000153696.8	ENSMUSG00000037339.18	Fam53a	chr5	protein_coding	family with sequence similarity 53, member A
chr5	33772178	33786681	-	33772178	33786193	5pMXE	0.33	50	50	ENSMUST00000155980.2	ENSMUSG00000037339.18	Fam53a	chr5	protein_coding	family with sequence similarity 53, member A
chr5	33802981	33807087	-	33802981;33803413	33803354;33807087	ES	0.5	50	50	ENSMUST00000075670.13	ENSMUSG00000004642.14	Slbp	chr5	protein_coding	stem-loop binding protein
chr5	33798272	33799245	-	33792519	33799245	A3SS	0.5	50	50	ENSMUST00000075670.13	ENSMUSG00000004642.14	Slbp	chr5	protein_coding	stem-loop binding protein
chr5	33802981	33807087	-	33803413	33807087	A3SS	0.5	50	50	ENSMUST00000148153.3	ENSMUSG00000004642.14	Slbp	chr5	protein_coding	stem-loop binding protein
chr5	33811958	33812667	-	33811958;33812216	33812057;33812667	ES	0.5	50	50	ENSMUST00000019439.9	ENSMUSG00000019295.9	Tmem129	chr5	protein_coding	transmembrane protein 129
chr5	33813141	33814616	-	33813141	33814967	A5SS	0.33	50	50	ENSMUST00000019439.9	ENSMUSG00000019295.9	Tmem129	chr5	protein_coding	transmembrane protein 129
chr5	33813141	33814906	-	33813141	33814967	A5SS	0.33	50	50	ENSMUST00000019439.9	ENSMUSG00000019295.9	Tmem129	chr5	protein_coding	transmembrane protein 129
chr5	33813141	33814616	-	33813141	33814906	A5SS	0.33	50	50	ENSMUST00000140931.2	ENSMUSG00000019295.9	Tmem129	chr5	protein_coding	transmembrane protein 129
chr5	33829129	33835964	+	33829129	33829326	3pMXE	0.5	50	50	ENSMUST00000074849.13	ENSMUSG00000037313.17	Tacc3	chr5	protein_coding	transforming, acidic coiled-coil containing protein 3
chr5	33816071	33818687	+	33816071	33818566	A3SS	0.33	50	50	ENSMUST00000074849.13	ENSMUSG00000037313.17	Tacc3	chr5	protein_coding	transforming, acidic coiled-coil containing protein 3
chr5	33824089	33824408	+	33824089	33824387	A3SS	0.5	50	50	ENSMUST00000074849.13	ENSMUSG00000037313.17	Tacc3	chr5	protein_coding	transforming, acidic coiled-coil containing protein 3
chr5	33828854	33829070	+	33828854	33829009	A3SS	0.5	50	50	ENSMUST00000074849.13	ENSMUSG00000037313.17	Tacc3	chr5	protein_coding	transforming, acidic coiled-coil containing protein 3
chr5	33829129	33835964	+	33829129;33829420	33829326;33835964	ES	0.5	50	50	ENSMUST00000079534.11	ENSMUSG00000037313.17	Tacc3	chr5	protein_coding	transforming, acidic coiled-coil containing protein 3
chr5	33816071;33818989	33818566;33821165	+	33816071	33821165	cassetteExon	0.5	100	100	ENSMUST00000201633.2	ENSMUSG00000037313.17	Tacc3	chr5	protein_coding	transforming, acidic coiled-coil containing protein 3
chr5	33816071;33818989	33818687;33821165	+	33816071	33821165	cassetteExon	0.5	100	100	ENSMUST00000201633.2	ENSMUSG00000037313.17	Tacc3	chr5	protein_coding	transforming, acidic coiled-coil containing protein 3
chr5	33816071	33821165	+	33816071	33818566	3pMXE	0.33	50	50	ENSMUST00000139453.2	ENSMUSG00000037313.17	Tacc3	chr5	protein_coding	transforming, acidic coiled-coil containing protein 3
chr5	33885260	33887025	+	33885260;33885589	33885536;33887025	ES	0.5	50	50	ENSMUST00000201437.4	ENSMUSG00000054252.19	Fgfr3	chr5	protein_coding	fibroblast growth factor receptor 3
chr5	33879272	33879650	+	33879298	33879650	A5SS	0.5	50	50	ENSMUST00000201437.4	ENSMUSG00000054252.19	Fgfr3	chr5	protein_coding	fibroblast growth factor receptor 3
chr5	33880674	33884991	+	33879855	33884991	A5SS	0.33	50	50	ENSMUST00000201437.4	ENSMUSG00000054252.19	Fgfr3	chr5	protein_coding	fibroblast growth factor receptor 3
chr5	33881271	33884991	+	33879855	33884991	A5SS	0.33	50	50	ENSMUST00000201437.4	ENSMUSG00000054252.19	Fgfr3	chr5	protein_coding	fibroblast growth factor receptor 3
chr5	33887678;33888775	33888625;33890066	+	33887678;33889605	33889461;33890066	MXE	0.5	100	100	ENSMUST00000067150.14	ENSMUSG00000054252.19	Fgfr3	chr5	protein_coding	fibroblast growth factor receptor 3
chr5	33887194	33887265	+	33887194	33887280	A3SS	0.5	50	50	ENSMUST00000067150.14	ENSMUSG00000054252.19	Fgfr3	chr5	protein_coding	fibroblast growth factor receptor 3
chr5	33890256	33890598	+	33890256	33890601	A3SS	0.5	50	50	ENSMUST00000067150.14	ENSMUSG00000054252.19	Fgfr3	chr5	protein_coding	fibroblast growth factor receptor 3
chr5	33887639	33888625	+	33887678	33888625	A5SS	0.5	50	50	ENSMUST00000114411.9	ENSMUSG00000054252.19	Fgfr3	chr5	protein_coding	fibroblast growth factor receptor 3
chr5	33881271	33884991	+	33880674	33884991	A5SS	0.33	50	50	ENSMUST00000134610.8	ENSMUSG00000054252.19	Fgfr3	chr5	protein_coding	fibroblast growth factor receptor 3
chr5	33888775	33890066	+	33889605	33890066	A5SS	0.5	50	50	ENSMUST00000134610.8	ENSMUSG00000054252.19	Fgfr3	chr5	protein_coding	fibroblast growth factor receptor 3
chr5	33936008	33939818	-	33936012	33939818	A3SS	0.5	50	50	ENSMUST00000005431.6	ENSMUSG00000005299.7	Letm1	chr5	protein_coding	leucine zipper-EF-hand containing transmembrane protein 1
chr5	33927155	33927561	-	33927155	33935952	A5SS	0.33	50	50	ENSMUST00000005431.6	ENSMUSG00000005299.7	Letm1	chr5	protein_coding	leucine zipper-EF-hand containing transmembrane protein 1
chr5	33927155	33935948	-	33927155	33935952	A5SS	0.33	50	50	ENSMUST00000005431.6	ENSMUSG00000005299.7	Letm1	chr5	protein_coding	leucine zipper-EF-hand containing transmembrane protein 1
chr5	33927155	33927561	-	33927155	33935948	A5SS	0.33	50	50	ENSMUST00000200827.2	ENSMUSG00000005299.7	Letm1	chr5	protein_coding	leucine zipper-EF-hand containing transmembrane protein 1
chr5	33978221	34000456	+	33978221;33979072	33979003;34000456	ES	0.5	50	50	ENSMUST00000075812.11	ENSMUSG00000057406.17	Nsd2	chr5	protein_coding	nuclear receptor binding SET domain protein 2
chr5	34018522	34024918	+	34018522;34022122	34022004;34024918	ES	0.5	50	50	ENSMUST00000075812.11	ENSMUSG00000057406.17	Nsd2	chr5	protein_coding	nuclear receptor binding SET domain protein 2
chr5	34026222;34028845	34028751;34036402	+	34026222	34036402	cassetteExon	0.5	100	100	ENSMUST00000075812.11	ENSMUSG00000057406.17	Nsd2	chr5	protein_coding	nuclear receptor binding SET domain protein 2
chr5	34026222;34028978	34028751;34036402	+	34026222	34036402	cassetteExon	0.5	100	100	ENSMUST00000075812.11	ENSMUSG00000057406.17	Nsd2	chr5	protein_coding	nuclear receptor binding SET domain protein 2
chr5	34022122	34024921	+	34022122	34024918	A3SS	0.5	50	50	ENSMUST00000075812.11	ENSMUSG00000057406.17	Nsd2	chr5	protein_coding	nuclear receptor binding SET domain protein 2
chr5	34040027	34040247	+	34040027	34040143	A3SS	0.5	50	50	ENSMUST00000075812.11	ENSMUSG00000057406.17	Nsd2	chr5	protein_coding	nuclear receptor binding SET domain protein 2
chr5	34018522	34024918	+	34018522	34022004	A3SS&ES	0.5	50	50	ENSMUST00000114397.9	ENSMUSG00000057406.17	Nsd2	chr5	protein_coding	nuclear receptor binding SET domain protein 2
chr5	34026222	34036402	+	34026222	34028751	3pMXE	0.5	50	50	ENSMUST00000114399.8	ENSMUSG00000057406.17	Nsd2	chr5	protein_coding	nuclear receptor binding SET domain protein 2
chr5	34028845	34036402	+	34028978	34036402	A5SS	0.33	50	50	ENSMUST00000139845.8	ENSMUSG00000057406.17	Nsd2	chr5	protein_coding	nuclear receptor binding SET domain protein 2
chr5	34140908	34141064	+	34140908	34141101	A3SS	0.5	50	50	ENSMUST00000094869.12	ENSMUSG00000070858.13	Gm1673	chr5	protein_coding	predicted gene 1673
chr5	34140983	34141101	+	34140908	34141101	A5SS	0.33	50	50	ENSMUST00000094869.12	ENSMUSG00000070858.13	Gm1673	chr5	protein_coding	predicted gene 1673
chr5	34140987	34141101	+	34140908	34141101	A5SS	0.33	50	50	ENSMUST00000094869.12	ENSMUSG00000070858.13	Gm1673	chr5	protein_coding	predicted gene 1673
chr5	34140987	34141101	+	34140983	34141101	A5SS	0.33	50	50	ENSMUST00000114383.8	ENSMUSG00000070858.13	Gm1673	chr5	protein_coding	predicted gene 1673
chr5	34157247	34158124	+	34155877	34158124	A5SS	0.5	50	50	ENSMUST00000056355.9	ENSMUSG00000048142.10	Nat8l	chr5	protein_coding	N-acetyltransferase 8-like
chr5	34164853	34190090	-	34164853	34170846	5pMXE	0.33	50	50	ENSMUST00000202825.2	ENSMUSG00000045102.13	Poln	chr5	protein_coding	DNA polymerase N
chr5	34166998	34170846	-	34164853	34170846	A3SS	0.5	50	50	ENSMUST00000202825.2	ENSMUSG00000045102.13	Poln	chr5	protein_coding	DNA polymerase N
chr5	34164853	34166184	-	34164853	34170846	A5SS	0.33	50	50	ENSMUST00000202825.2	ENSMUSG00000045102.13	Poln	chr5	protein_coding	DNA polymerase N
chr5	34190172	34234441	-	34190172	34208337	5pMXE	0.33	50	50	ENSMUST00000201251.4	ENSMUSG00000045102.13	Poln	chr5	protein_coding	DNA polymerase N
chr5	34190172	34261242	-	34190172	34208337	5pMXE	0.33	50	50	ENSMUST00000201251.4	ENSMUSG00000045102.13	Poln	chr5	protein_coding	DNA polymerase N
chr5	34171697	34190090	-	34164853	34190090	A3SS	0.33	50	50	ENSMUST00000201251.4	ENSMUSG00000045102.13	Poln	chr5	protein_coding	DNA polymerase N
chr5	34181781	34190090	-	34164853	34190090	A3SS	0.33	50	50	ENSMUST00000201251.4	ENSMUSG00000045102.13	Poln	chr5	protein_coding	DNA polymerase N
chr5	34164853	34166184	-	34164853	34190090	A5SS	0.33	50	50	ENSMUST00000201251.4	ENSMUSG00000045102.13	Poln	chr5	protein_coding	DNA polymerase N
chr5	34261307	34264431	-	34261307;34262573	34262520;34264431	ES	0.5	50	50	ENSMUST00000202638.4	ENSMUSG00000045102.13	Poln	chr5	protein_coding	DNA polymerase N
chr5	34307205	34326734	-	34307205;34325787	34325739;34326734	ES	0.2	50	50	ENSMUST00000202638.4	ENSMUSG00000045102.13	Poln	chr5	protein_coding	DNA polymerase N
chr5	34171697;34181781	34181650;34190090	-	34171697	34190090	cassetteExon	0.5	100	100	ENSMUST00000202638.4	ENSMUSG00000045102.13	Poln	chr5	protein_coding	DNA polymerase N
chr5	34325787;34326198	34326115;34326734	-	34325787	34326734	cassetteExon	0.5	100	100	ENSMUST00000202638.4	ENSMUSG00000045102.13	Poln	chr5	protein_coding	DNA polymerase N
chr5	34325602	34326734	-	34325787	34326734	A3SS&ES	0.2	50	50	ENSMUST00000202638.4	ENSMUSG00000045102.13	Poln	chr5	protein_coding	DNA polymerase N
chr5	34325911	34326734	-	34325787	34326734	A3SS	0.2	50	50	ENSMUST00000202638.4	ENSMUSG00000045102.13	Poln	chr5	protein_coding	DNA polymerase N
chr5	34261307	34263030	-	34261307	34262520	A5SS&ES	0.33	50	50	ENSMUST00000202638.4	ENSMUSG00000045102.13	Poln	chr5	protein_coding	DNA polymerase N
chr5	34307205;34325911	34325739;34326734	-	34307205	34326734	cassetteExon	0.5	100	100	ENSMUST00000042954.11	ENSMUSG00000045102.13	Poln	chr5	protein_coding	DNA polymerase N
chr5	34307205;34326198	34325739;34326734	-	34307205	34326734	cassetteExon	0.5	100	100	ENSMUST00000042954.11	ENSMUSG00000045102.13	Poln	chr5	protein_coding	DNA polymerase N
chr5	34325602	34326734	-	34307205	34326734	A3SS	0.2	50	50	ENSMUST00000042954.11	ENSMUSG00000045102.13	Poln	chr5	protein_coding	DNA polymerase N
chr5	34261307	34263030	-	34261307	34264431	A5SS	0.33	50	50	ENSMUST00000202409.2	ENSMUSG00000045102.13	Poln	chr5	protein_coding	DNA polymerase N
chr5	34237303	34261242	-	34190172	34261242	A3SS	0.5	50	50	ENSMUST00000202741.5	ENSMUSG00000045102.13	Poln	chr5	protein_coding	DNA polymerase N
chr5	34190172	34234441	-	34190172	34261242	A5SS	0.33	50	50	ENSMUST00000202741.5	ENSMUSG00000045102.13	Poln	chr5	protein_coding	DNA polymerase N
chr5	34320342	34320867	-	34311450	34320867	A3SS	0.5	50	50	ENSMUST00000060049.8	ENSMUSG00000079555.3	Haus3	chr5	protein_coding	HAUS augmin-like complex, subunit 3
chr5	34325911	34326734	-	34325602	34326734	A3SS	0.2	50	50	ENSMUST00000202290.2	ENSMUSG00000079555.3	Haus3	chr5	protein_coding	HAUS augmin-like complex, subunit 3
chr5	34326198	34326734	-	34325602	34326734	A3SS	0.2	50	50	ENSMUST00000202290.2	ENSMUSG00000079555.3	Haus3	chr5	protein_coding	HAUS augmin-like complex, subunit 3
chr5	34325911	34326734	-	34326198	34326734	A3SS&ES	0.25	50	50	ENSMUST00000202042.2	ENSMUSG00000079555.3	Haus3	chr5	protein_coding	HAUS augmin-like complex, subunit 3
chr5	34307205	34326734	-	34325911	34326734	3pMXE	0.2	50	50	ENSMUST00000202541.2	ENSMUSG00000079555.3	Haus3	chr5	protein_coding	HAUS augmin-like complex, subunit 3
chr5	34336268	34344673	-	34336268;34341687	34341658;34344673	ES	0.5	50	50	ENSMUST00000042701.13	ENSMUSG00000037235.14	Mxd4	chr5	protein_coding	Max dimerization protein 4
chr5	34375209	34389498	-	34375209;34382397	34382296;34389498	ES	0.5	50	50	ENSMUST00000094868.10	ENSMUSG00000037224.16	Zfyve28	chr5	protein_coding	zinc finger, FYVE domain containing 28
chr5	34393484	34445443	-	34393484;34400657	34400517;34445443	ES	0.5	50	50	ENSMUST00000094868.10	ENSMUSG00000037224.16	Zfyve28	chr5	protein_coding	zinc finger, FYVE domain containing 28
chr5	34375209;34376734	34376525;34382296	-	34375209	34382296	cassetteExon	0.5	100	100	ENSMUST00000094868.10	ENSMUSG00000037224.16	Zfyve28	chr5	protein_coding	zinc finger, FYVE domain containing 28
chr5	34379801	34382296	-	34375209	34382296	A3SS	0.33	50	50	ENSMUST00000094868.10	ENSMUSG00000037224.16	Zfyve28	chr5	protein_coding	zinc finger, FYVE domain containing 28
chr5	34384235	34390649	-	34389587	34390649	A3SS&ES	0.5	50	50	ENSMUST00000094868.10	ENSMUSG00000037224.16	Zfyve28	chr5	protein_coding	zinc finger, FYVE domain containing 28
chr5	34393502	34400517	-	34393484	34400517	A3SS	0.5	50	50	ENSMUST00000094868.10	ENSMUSG00000037224.16	Zfyve28	chr5	protein_coding	zinc finger, FYVE domain containing 28
chr5	34389587	34390293	-	34389587	34390649	A5SS	0.5	50	50	ENSMUST00000094868.10	ENSMUSG00000037224.16	Zfyve28	chr5	protein_coding	zinc finger, FYVE domain containing 28
chr5	34375209	34376525	-	34375209	34389498	A5SS	0.33	50	50	ENSMUST00000132104.2	ENSMUSG00000037224.16	Zfyve28	chr5	protein_coding	zinc finger, FYVE domain containing 28
chr5	34379801	34382296	-	34376734	34382296	A3SS	0.33	50	50	ENSMUST00000130435.5	ENSMUSG00000037224.16	Zfyve28	chr5	protein_coding	zinc finger, FYVE domain containing 28
chr5	34393484	34445443	-	34393484	34400517	5pMXE	0.5	50	50	ENSMUST00000114370.8	ENSMUSG00000037224.16	Zfyve28	chr5	protein_coding	zinc finger, FYVE domain containing 28
chr5	34393484	34445443	-	34400657	34445443	A3SS&ES	0.5	50	50	ENSMUST00000114368.2	ENSMUSG00000037224.16	Zfyve28	chr5	protein_coding	zinc finger, FYVE domain containing 28
chr5	34493885	34504119	+	34493885;34500023	34499866;34504119	ES	0.5	50	50	ENSMUST00000182709.8	ENSMUSG00000029110.14	Rnf4	chr5	protein_coding	ring finger protein 4
chr5	34493885;34496168	34496028;34499866	+	34493885	34499866	cassetteExon	0.5	100	100	ENSMUST00000182709.8	ENSMUSG00000029110.14	Rnf4	chr5	protein_coding	ring finger protein 4
chr5	34493828	34499866	+	34493885	34499866	A5SS	0.16	50	50	ENSMUST00000182709.8	ENSMUSG00000029110.14	Rnf4	chr5	protein_coding	ring finger protein 4
chr5	34494153	34499866	+	34493885	34499866	A5SS	0.16	50	50	ENSMUST00000182709.8	ENSMUSG00000029110.14	Rnf4	chr5	protein_coding	ring finger protein 4
chr5	34494441	34499866	+	34493885	34499866	A5SS	0.16	50	50	ENSMUST00000182709.8	ENSMUSG00000029110.14	Rnf4	chr5	protein_coding	ring finger protein 4
chr5	34494876	34499866	+	34493885	34499866	A5SS	0.16	50	50	ENSMUST00000182709.8	ENSMUSG00000029110.14	Rnf4	chr5	protein_coding	ring finger protein 4
chr5	34493885	34504119	+	34500023	34504119	A5SS&ES	0.5	50	50	ENSMUST00000030992.13	ENSMUSG00000029110.14	Rnf4	chr5	protein_coding	ring finger protein 4
chr5	34494153	34499866	+	34493828	34499866	A5SS	0.16	50	50	ENSMUST00000030992.13	ENSMUSG00000029110.14	Rnf4	chr5	protein_coding	ring finger protein 4
chr5	34494441	34499866	+	34493828	34499866	A5SS	0.16	50	50	ENSMUST00000030992.13	ENSMUSG00000029110.14	Rnf4	chr5	protein_coding	ring finger protein 4
chr5	34494876	34499866	+	34493828	34499866	A5SS	0.16	50	50	ENSMUST00000030992.13	ENSMUSG00000029110.14	Rnf4	chr5	protein_coding	ring finger protein 4
chr5	34496168	34499866	+	34493828	34499866	A5SS	0.16	50	50	ENSMUST00000030992.13	ENSMUSG00000029110.14	Rnf4	chr5	protein_coding	ring finger protein 4
chr5	34493885	34496028	+	34493885	34504119	A3SS	0.33	50	50	ENSMUST00000181991.8	ENSMUSG00000029110.14	Rnf4	chr5	protein_coding	ring finger protein 4
chr5	34494153	34499866	+	34496168	34499866	A5SS&ES	0.16	50	50	ENSMUST00000182582.2	ENSMUSG00000029110.14	Rnf4	chr5	protein_coding	ring finger protein 4
chr5	34494441	34499866	+	34496168	34499866	A5SS&ES	0.16	50	50	ENSMUST00000182582.2	ENSMUSG00000029110.14	Rnf4	chr5	protein_coding	ring finger protein 4
chr5	34494876	34499866	+	34496168	34499866	A5SS&ES	0.16	50	50	ENSMUST00000182582.2	ENSMUSG00000029110.14	Rnf4	chr5	protein_coding	ring finger protein 4
chr5	34494441	34499866	+	34494153	34499866	A5SS	0.16	50	50	ENSMUST00000182583.8	ENSMUSG00000029110.14	Rnf4	chr5	protein_coding	ring finger protein 4
chr5	34494876	34499866	+	34494153	34499866	A5SS	0.16	50	50	ENSMUST00000182583.8	ENSMUSG00000029110.14	Rnf4	chr5	protein_coding	ring finger protein 4
chr5	34494876	34499866	+	34494441	34499866	A5SS	0.16	50	50	ENSMUST00000182047.2	ENSMUSG00000029110.14	Rnf4	chr5	protein_coding	ring finger protein 4
chr5	34597577	34600645	+	34597577;34597934	34597692;34600645	ES	0.5	50	50	ENSMUST00000180376.8	ENSMUSG00000037210.17	Fam193a	chr5	protein_coding	family with sequence homology 193, member A
chr5	34602257	34616342	+	34602257;34615447	34615249;34616342	ES	0.5	50	50	ENSMUST00000180376.8	ENSMUSG00000037210.17	Fam193a	chr5	protein_coding	family with sequence homology 193, member A
chr5	34656643	34658252	-	34656643;34657080	34656832;34658252	ES	0.5	50	50	ENSMUST00000030991.14	ENSMUSG00000059866.14	Tnip2	chr5	protein_coding	TNFAIP3 interacting protein 2
chr5	34658341	34660881	-	34658341;34658864	34658802;34660881	ES	0.33	50	50	ENSMUST00000030991.14	ENSMUSG00000059866.14	Tnip2	chr5	protein_coding	TNFAIP3 interacting protein 2
chr5	34658893	34660881	-	34658864	34660881	A3SS	0.33	50	50	ENSMUST00000030991.14	ENSMUSG00000059866.14	Tnip2	chr5	protein_coding	TNFAIP3 interacting protein 2
chr5	34658341;34658893	34658802;34660881	-	34658341	34660881	cassetteExon	0.5	100	100	ENSMUST00000087737.10	ENSMUSG00000059866.14	Tnip2	chr5	protein_coding	TNFAIP3 interacting protein 2
chr5	34656643	34658252	-	34657080	34658252	3pMXE	0.5	50	50	ENSMUST00000143072.2	ENSMUSG00000059866.14	Tnip2	chr5	protein_coding	TNFAIP3 interacting protein 2
chr5	34658341	34660881	-	34658341	34658802	5pMXE	0.5	50	50	ENSMUST00000143072.2	ENSMUSG00000059866.14	Tnip2	chr5	protein_coding	TNFAIP3 interacting protein 2
chr5	34658341	34660881	-	34658893	34660881	3pMXE	0.33	50	50	ENSMUST00000137555.2	ENSMUSG00000059866.14	Tnip2	chr5	protein_coding	TNFAIP3 interacting protein 2
chr5	34683245	34708905	+	34683245;34684099	34683888;34708905	ES	0.2	50	50	ENSMUST00000125817.8	ENSMUSG00000054520.16	Sh3bp2	chr5	protein_coding	SH3-domain binding protein 2
chr5	34700926	34708905	+	34684099	34708905	A5SS	0.2	50	50	ENSMUST00000125817.8	ENSMUSG00000054520.16	Sh3bp2	chr5	protein_coding	SH3-domain binding protein 2
chr5	34701633	34708905	+	34684099	34708905	A5SS	0.2	50	50	ENSMUST00000125817.8	ENSMUSG00000054520.16	Sh3bp2	chr5	protein_coding	SH3-domain binding protein 2
chr5	34707140	34708905	+	34684099	34708905	A5SS	0.2	50	50	ENSMUST00000125817.8	ENSMUSG00000054520.16	Sh3bp2	chr5	protein_coding	SH3-domain binding protein 2
chr5	34700926	34708905	+	34683245	34708905	A5SS	0.2	50	50	ENSMUST00000067638.14	ENSMUSG00000054520.16	Sh3bp2	chr5	protein_coding	SH3-domain binding protein 2
chr5	34701633	34708905	+	34683245	34708905	A5SS	0.2	50	50	ENSMUST00000067638.14	ENSMUSG00000054520.16	Sh3bp2	chr5	protein_coding	SH3-domain binding protein 2
chr5	34707140	34708905	+	34683245	34708905	A5SS	0.2	50	50	ENSMUST00000067638.14	ENSMUSG00000054520.16	Sh3bp2	chr5	protein_coding	SH3-domain binding protein 2
chr5	34700926	34708905	+	34700926;34701633	34701571;34708905	ES	0.33	50	50	ENSMUST00000138912.8	ENSMUSG00000054520.16	Sh3bp2	chr5	protein_coding	SH3-domain binding protein 2
chr5	34707140	34708905	+	34701633	34708905	A5SS	0.33	50	50	ENSMUST00000138912.8	ENSMUSG00000054520.16	Sh3bp2	chr5	protein_coding	SH3-domain binding protein 2
chr5	34707140	34708905	+	34700926	34708905	A5SS	0.2	50	50	ENSMUST00000153750.3	ENSMUSG00000054520.16	Sh3bp2	chr5	protein_coding	SH3-domain binding protein 2
chr5	34785857	34787814	+	34785857;34786516	34786480;34787814	ES	0.33	50	50	ENSMUST00000114338.9	ENSMUSG00000029106.15	Add1	chr5	protein_coding	adducin 1 (alpha)
chr5	34731257;34755791	34755513;34758668	+	34731257	34758668	cassetteExon	0.5	100	100	ENSMUST00000114338.9	ENSMUSG00000029106.15	Add1	chr5	protein_coding	adducin 1 (alpha)
chr5	34731257;34755791	34755614;34758668	+	34731257	34758668	cassetteExon	0.5	100	100	ENSMUST00000114338.9	ENSMUSG00000029106.15	Add1	chr5	protein_coding	adducin 1 (alpha)
chr5	34777478;34778262	34778176;34782623	+	34777478	34782623	cassetteExon	0.5	100	100	ENSMUST00000114338.9	ENSMUSG00000029106.15	Add1	chr5	protein_coding	adducin 1 (alpha)
chr5	34786516;34787628	34787579;34787814	+	34786516	34787814	cassetteExon	0.5	100	100	ENSMUST00000114338.9	ENSMUSG00000029106.15	Add1	chr5	protein_coding	adducin 1 (alpha)
chr5	34785857	34786483	+	34785857	34786480	A3SS	0.33	50	50	ENSMUST00000114338.9	ENSMUSG00000029106.15	Add1	chr5	protein_coding	adducin 1 (alpha)
chr5	34753049	34758668	+	34731257	34758668	A5SS	0.33	50	50	ENSMUST00000114338.9	ENSMUSG00000029106.15	Add1	chr5	protein_coding	adducin 1 (alpha)
chr5	34774251	34776694	+	34774158	34776694	A5SS	0.5	50	50	ENSMUST00000114338.9	ENSMUSG00000029106.15	Add1	chr5	protein_coding	adducin 1 (alpha)
chr5	34731257	34755614	+	34731257	34755513	A3SS	0.33	50	50	ENSMUST00000147574.8	ENSMUSG00000029106.15	Add1	chr5	protein_coding	adducin 1 (alpha)
chr5	34753049	34758668	+	34755791	34758668	A5SS&ES	0.33	50	50	ENSMUST00000147574.8	ENSMUSG00000029106.15	Add1	chr5	protein_coding	adducin 1 (alpha)
chr5	34774158	34782623	+	34777478	34782623	A5SS&ES	0.33	50	50	ENSMUST00000001108.11	ENSMUSG00000029106.15	Add1	chr5	protein_coding	adducin 1 (alpha)
chr5	34785857;34786516	34786483;34787814	+	34785857	34787814	cassetteExon	0.5	100	100	ENSMUST00000114340.9	ENSMUSG00000029106.15	Add1	chr5	protein_coding	adducin 1 (alpha)
chr5	34787628	34787814	+	34785857	34787814	A5SS	0.33	50	50	ENSMUST00000114340.9	ENSMUSG00000029106.15	Add1	chr5	protein_coding	adducin 1 (alpha)
chr5	34774158	34776694	+	34774158	34782623	A3SS	0.5	50	50	ENSMUST00000135321.2	ENSMUSG00000029106.15	Add1	chr5	protein_coding	adducin 1 (alpha)
chr5	34778262	34782623	+	34774158	34782623	A5SS	0.33	50	50	ENSMUST00000135321.2	ENSMUSG00000029106.15	Add1	chr5	protein_coding	adducin 1 (alpha)
chr5	34791988	34792195	-	34792043	34792195	A3SS	0.5	50	50	ENSMUST00000001109.11	ENSMUSG00000001082.13	Mfsd10	chr5	protein_coding	major facilitator superfamily domain containing 10
chr5	34792246	34792395	-	34792306	34792395	A3SS	0.5	50	50	ENSMUST00000001109.11	ENSMUSG00000001082.13	Mfsd10	chr5	protein_coding	major facilitator superfamily domain containing 10
chr5	34792571	34792714	-	34792503	34792714	A3SS	0.5	50	50	ENSMUST00000001109.11	ENSMUSG00000001082.13	Mfsd10	chr5	protein_coding	major facilitator superfamily domain containing 10
chr5	34792736	34792953	-	34792875	34792953	A3SS	0.5	50	50	ENSMUST00000001109.11	ENSMUSG00000001082.13	Mfsd10	chr5	protein_coding	major facilitator superfamily domain containing 10
chr5	34792999	34793365	-	34793111	34793365	A3SS	0.2	50	50	ENSMUST00000001109.11	ENSMUSG00000001082.13	Mfsd10	chr5	protein_coding	major facilitator superfamily domain containing 10
chr5	34793043	34793365	-	34793111	34793365	A3SS	0.2	50	50	ENSMUST00000001109.11	ENSMUSG00000001082.13	Mfsd10	chr5	protein_coding	major facilitator superfamily domain containing 10
chr5	34793086	34793365	-	34793111	34793365	A3SS	0.2	50	50	ENSMUST00000001109.11	ENSMUSG00000001082.13	Mfsd10	chr5	protein_coding	major facilitator superfamily domain containing 10
chr5	34793107	34793365	-	34793111	34793365	A3SS	0.2	50	50	ENSMUST00000001109.11	ENSMUSG00000001082.13	Mfsd10	chr5	protein_coding	major facilitator superfamily domain containing 10
chr5	34793436	34793754	-	34793468	34793754	A3SS	0.5	50	50	ENSMUST00000001109.11	ENSMUSG00000001082.13	Mfsd10	chr5	protein_coding	major facilitator superfamily domain containing 10
chr5	34794130	34794271	-	34794127	34794271	A3SS	0.33	50	50	ENSMUST00000001109.11	ENSMUSG00000001082.13	Mfsd10	chr5	protein_coding	major facilitator superfamily domain containing 10
chr5	34794169	34794271	-	34794127	34794271	A3SS	0.33	50	50	ENSMUST00000001109.11	ENSMUSG00000001082.13	Mfsd10	chr5	protein_coding	major facilitator superfamily domain containing 10
chr5	34794127	34794443	-	34794127	34794271	A5SS	0.5	50	50	ENSMUST00000001109.11	ENSMUSG00000001082.13	Mfsd10	chr5	protein_coding	major facilitator superfamily domain containing 10
chr5	34794130	34794443	-	34794127	34794443	A3SS	0.5	50	50	ENSMUST00000114331.10	ENSMUSG00000001082.13	Mfsd10	chr5	protein_coding	major facilitator superfamily domain containing 10
chr5	34794169	34794271	-	34794130	34794271	A3SS	0.33	50	50	ENSMUST00000114329.8	ENSMUSG00000001082.13	Mfsd10	chr5	protein_coding	major facilitator superfamily domain containing 10
chr5	34794130	34794443	-	34794130	34794271	A5SS	0.5	50	50	ENSMUST00000114329.8	ENSMUSG00000001082.13	Mfsd10	chr5	protein_coding	major facilitator superfamily domain containing 10
chr5	34792999	34793365	-	34793043	34793365	A3SS	0.2	50	50	ENSMUST00000137150.8	ENSMUSG00000001082.13	Mfsd10	chr5	protein_coding	major facilitator superfamily domain containing 10
chr5	34793086	34793365	-	34793043	34793365	A3SS	0.2	50	50	ENSMUST00000137150.8	ENSMUSG00000001082.13	Mfsd10	chr5	protein_coding	major facilitator superfamily domain containing 10
chr5	34793107	34793365	-	34793043	34793365	A3SS	0.2	50	50	ENSMUST00000137150.8	ENSMUSG00000001082.13	Mfsd10	chr5	protein_coding	major facilitator superfamily domain containing 10
chr5	34792999	34793365	-	34793107	34793365	A3SS	0.2	50	50	ENSMUST00000134156.8	ENSMUSG00000001082.13	Mfsd10	chr5	protein_coding	major facilitator superfamily domain containing 10
chr5	34793086	34793365	-	34793107	34793365	A3SS	0.2	50	50	ENSMUST00000134156.8	ENSMUSG00000001082.13	Mfsd10	chr5	protein_coding	major facilitator superfamily domain containing 10
chr5	34792999	34793365	-	34793086	34793365	A3SS	0.2	50	50	ENSMUST00000126257.6	ENSMUSG00000001082.13	Mfsd10	chr5	protein_coding	major facilitator superfamily domain containing 10
chr5	34798801	34801270	-	34798826	34801270	A3SS	0.5	50	50	ENSMUST00000041364.13	ENSMUSG00000036693.13	Nop14	chr5	protein_coding	NOP14 nucleolar protein
chr5	34852197	34867477	+	34852197	34856207	3pMXE	0.5	50	50	ENSMUST00000074651.11	ENSMUSG00000052783.17	Grk4	chr5	protein_coding	G protein-coupled receptor kinase 4
chr5	34877235;34885840	34885741;34887349	+	34877235	34887349	cassetteExon	0.5	100	100	ENSMUST00000001112.14	ENSMUSG00000052783.17	Grk4	chr5	protein_coding	G protein-coupled receptor kinase 4
chr5	34901816	34902507	+	34888914	34902507	A5SS	0.5	50	50	ENSMUST00000001112.14	ENSMUSG00000052783.17	Grk4	chr5	protein_coding	G protein-coupled receptor kinase 4
chr5	34940169	34951449	+	34940169;34947731	34947611;34951449	ES	0.5	50	50	ENSMUST00000148953.8	ENSMUSG00000029104.16	Htt	chr5	protein_coding	huntingtin
chr5	35072447	35074995	+	35065451	35074995	A5SS	0.5	50	50	ENSMUST00000201636.2	ENSMUSG00000051246.4	Msantd1	chr5	protein_coding	Myb/SANT-like DNA-binding domain containing 1
chr5	35075259	35080668	+	35075259;35079023	35078748;35080668	ES	0.5	50	50	ENSMUST00000212362.2	ENSMUSG00000051246.4	Msantd1	chr5	protein_coding	Myb/SANT-like DNA-binding domain containing 1
chr5	35187434	35189215	+	35187434;35187965	35187812;35189215	ES	0.5	50	50	ENSMUST00000030984.14	ENSMUSG00000029101.17	Rgs12	chr5	protein_coding	regulator of G-protein signaling 12
chr5	35185976;35186960	35186841;35187355	+	35185976	35187355	cassetteExon	0.5	100	100	ENSMUST00000030984.14	ENSMUSG00000029101.17	Rgs12	chr5	protein_coding	regulator of G-protein signaling 12
chr5	35181697	35183263	+	35181697	35183193	A3SS	0.5	50	50	ENSMUST00000030984.14	ENSMUSG00000029101.17	Rgs12	chr5	protein_coding	regulator of G-protein signaling 12
chr5	35184333	35185727	+	35184333	35185880	A3SS	0.5	50	50	ENSMUST00000030984.14	ENSMUSG00000029101.17	Rgs12	chr5	protein_coding	regulator of G-protein signaling 12
chr5	35131433	35132561	+	35124099	35132561	A5SS	0.33	50	50	ENSMUST00000030984.14	ENSMUSG00000029101.17	Rgs12	chr5	protein_coding	regulator of G-protein signaling 12
chr5	35132405	35132561	+	35124099	35132561	A5SS	0.33	50	50	ENSMUST00000030984.14	ENSMUSG00000029101.17	Rgs12	chr5	protein_coding	regulator of G-protein signaling 12
chr5	35146556	35156552	+	35132677	35156552	A5SS	0.33	50	50	ENSMUST00000030984.14	ENSMUSG00000029101.17	Rgs12	chr5	protein_coding	regulator of G-protein signaling 12
chr5	35147212	35156552	+	35132677	35156552	A5SS	0.33	50	50	ENSMUST00000030984.14	ENSMUSG00000029101.17	Rgs12	chr5	protein_coding	regulator of G-protein signaling 12
chr5	35171878	35176687	+	35156573	35176687	A5SS	0.5	50	50	ENSMUST00000030984.14	ENSMUSG00000029101.17	Rgs12	chr5	protein_coding	regulator of G-protein signaling 12
chr5	35132405	35132561	+	35131433	35132561	A5SS	0.33	50	50	ENSMUST00000202915.2	ENSMUSG00000029101.17	Rgs12	chr5	protein_coding	regulator of G-protein signaling 12
chr5	35147212	35156552	+	35146556	35156552	A5SS	0.33	50	50	ENSMUST00000156339.8	ENSMUSG00000029101.17	Rgs12	chr5	protein_coding	regulator of G-protein signaling 12
chr5	35187434	35196507	+	35187434	35189215	3pMXE	0.33	50	50	ENSMUST00000114280.8	ENSMUSG00000029101.17	Rgs12	chr5	protein_coding	regulator of G-protein signaling 12
chr5	35187434	35187812	+	35187434	35196507	A3SS	0.33	50	50	ENSMUST00000150139.3	ENSMUSG00000029101.17	Rgs12	chr5	protein_coding	regulator of G-protein signaling 12
chr5	35189778	35196507	+	35187434	35196507	A5SS	0.5	50	50	ENSMUST00000150139.3	ENSMUSG00000029101.17	Rgs12	chr5	protein_coding	regulator of G-protein signaling 12
chr5	35199054	35199910	+	35199054;35199808	35199634;35199910	ES	0.5	50	50	ENSMUST00000030985.10	ENSMUSG00000029102.10	Hgfac	chr5	protein_coding	hepatocyte growth factor activator
chr5	35202193	35202556	+	35202193	35202595	A3SS	0.5	50	50	ENSMUST00000030985.10	ENSMUSG00000029102.10	Hgfac	chr5	protein_coding	hepatocyte growth factor activator
chr5	35214481	35221678	+	35214481	35232647	A3SS	0.5	50	50	ENSMUST00000101298.9	ENSMUSG00000044716.13	Dok7	chr5	protein_coding	docking protein 7
chr5	35214308	35214436	+	35214332	35214436	A5SS	0.5	50	50	ENSMUST00000101298.9	ENSMUSG00000044716.13	Dok7	chr5	protein_coding	docking protein 7
chr5	35223994	35232647	+	35214481	35232647	A5SS	0.5	50	50	ENSMUST00000101298.9	ENSMUSG00000044716.13	Dok7	chr5	protein_coding	docking protein 7
chr5	35259883	35260525	-	35259883	35262823	A5SS	0.5	50	50	ENSMUST00000030986.15	ENSMUSG00000029103.17	Lrpap1	chr5	protein_coding	low density lipoprotein receptor-related protein associated protein 1
chr5	35522114	35523524	+	35522114	35524186	A3SS	0.5	50	50	ENSMUST00000201379.4	ENSMUSG00000106762.4	4930478P22Rik	chr5	lncRNA	RIKEN cDNA 4930478P22 gene
chr5	35518969	35521280	+	35519535	35521280	A5SS	0.33	50	50	ENSMUST00000201379.4	ENSMUSG00000106762.4	4930478P22Rik	chr5	lncRNA	RIKEN cDNA 4930478P22 gene
chr5	35519987	35521280	+	35519535	35521280	A5SS	0.33	50	50	ENSMUST00000201379.4	ENSMUSG00000106762.4	4930478P22Rik	chr5	lncRNA	RIKEN cDNA 4930478P22 gene
chr5	35518969	35521280	+	35519987	35521280	A5SS	0.33	50	50	ENSMUST00000202026.4	ENSMUSG00000106762.4	4930478P22Rik	chr5	lncRNA	RIKEN cDNA 4930478P22 gene
chr5	35546833	35549082	+	35546833	35557022	A3SS	0.5	50	50	ENSMUST00000172923.2	ENSMUSG00000067438.6	Hmx1	chr5	protein_coding	H6 homeobox 1
chr5	35675111	35682777	-	35675111;35676457	35676425;35682777	ES	0.5	50	50	ENSMUST00000038676.7	ENSMUSG00000036596.7	Cpz	chr5	protein_coding	carboxypeptidase Z
chr5	35730235	35731424	-	35730266	35731424	A3SS	0.5	50	50	ENSMUST00000030980.12	ENSMUSG00000029097.12	Trmt44	chr5	protein_coding	tRNA methyltransferase 44
chr5	35767166	35771346	+	35767166	35769359	3pMXE	0.25	50	50	ENSMUST00000068947.14	ENSMUSG00000029098.18	Acox3	chr5	protein_coding	acyl-Coenzyme A oxidase 3, pristanoyl
chr5	35767166	35768424	+	35767166	35769359	A3SS	0.25	50	50	ENSMUST00000068947.14	ENSMUSG00000029098.18	Acox3	chr5	protein_coding	acyl-Coenzyme A oxidase 3, pristanoyl
chr5	35767166	35768832	+	35767166	35769359	A3SS	0.25	50	50	ENSMUST00000068947.14	ENSMUSG00000029098.18	Acox3	chr5	protein_coding	acyl-Coenzyme A oxidase 3, pristanoyl
chr5	35740663	35741220	+	35740478	35741220	A5SS	0.33	50	50	ENSMUST00000068947.14	ENSMUSG00000029098.18	Acox3	chr5	protein_coding	acyl-Coenzyme A oxidase 3, pristanoyl
chr5	35740940	35741220	+	35740478	35741220	A5SS	0.33	50	50	ENSMUST00000068947.14	ENSMUSG00000029098.18	Acox3	chr5	protein_coding	acyl-Coenzyme A oxidase 3, pristanoyl
chr5	35741315	35745503	+	35741319	35745503	A5SS	0.5	50	50	ENSMUST00000068947.14	ENSMUSG00000029098.18	Acox3	chr5	protein_coding	acyl-Coenzyme A oxidase 3, pristanoyl
chr5	35740940	35741220	+	35740663	35741220	A5SS	0.33	50	50	ENSMUST00000114237.8	ENSMUSG00000029098.18	Acox3	chr5	protein_coding	acyl-Coenzyme A oxidase 3, pristanoyl
chr5	35767166	35768424	+	35767166	35771346	A3SS	0.25	50	50	ENSMUST00000202266.4	ENSMUSG00000029098.18	Acox3	chr5	protein_coding	acyl-Coenzyme A oxidase 3, pristanoyl
chr5	35767166	35768832	+	35767166	35771346	A3SS	0.25	50	50	ENSMUST00000202266.4	ENSMUSG00000029098.18	Acox3	chr5	protein_coding	acyl-Coenzyme A oxidase 3, pristanoyl
chr5	35767166	35768832	+	35767166	35768424	A3SS	0.25	50	50	ENSMUST00000068563.12	ENSMUSG00000029098.18	Acox3	chr5	protein_coding	acyl-Coenzyme A oxidase 3, pristanoyl
chr5	35819608	35821307	-	35812936	35821307	A3SS	0.5	50	50	ENSMUST00000087629.10	ENSMUSG00000029096.16	Htra3	chr5	protein_coding	HtrA serine peptidase 3
chr5	35828475	35828569	-	35828475	35836288	A5SS	0.5	50	50	ENSMUST00000087629.10	ENSMUSG00000029096.16	Htra3	chr5	protein_coding	HtrA serine peptidase 3
chr5	35875720	35878874	-	35875720;35876444	35876317;35878874	ES	0.5	50	50	ENSMUST00000127825.8	ENSMUSG00000036553.17	Sh3tc1	chr5	protein_coding	SH3 domain and tetratricopeptide repeats 1
chr5	35857251	35857601	-	35857139	35857601	A3SS	0.5	50	50	ENSMUST00000127825.8	ENSMUSG00000036553.17	Sh3tc1	chr5	protein_coding	SH3 domain and tetratricopeptide repeats 1
chr5	35868338	35871457	-	35868338	35871407	A5SS	0.5	50	50	ENSMUST00000127825.8	ENSMUSG00000036553.17	Sh3tc1	chr5	protein_coding	SH3 domain and tetratricopeptide repeats 1
chr5	35881488	35897302	-	35881488	35886291	5pMXE	0.5	50	50	ENSMUST00000070203.14	ENSMUSG00000036553.17	Sh3tc1	chr5	protein_coding	SH3 domain and tetratricopeptide repeats 1
chr5	35880484	35881258	-	35878948	35881258	A3SS	0.5	50	50	ENSMUST00000070203.14	ENSMUSG00000036553.17	Sh3tc1	chr5	protein_coding	SH3 domain and tetratricopeptide repeats 1
chr5	35985526	35990397	+	35985526;35989086	35989030;35990397	ES	0.5	50	50	ENSMUST00000101280.10	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	35998745	36006148	+	35998745;36000610	36000512;36006148	ES	0.5	50	50	ENSMUST00000101280.10	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	35994441;35997166	35997134;35998625	+	35994441	35998625	cassetteExon	0.5	100	100	ENSMUST00000101280.10	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	35998745;36006913	36006860;36014472	+	35998745;36006249	36000512;36014472	MXE	0.5	100	100	ENSMUST00000101280.10	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	35998745;36013564	36013445;36014472	+	35998745;36006249	36000512;36014472	MXE	0.5	100	100	ENSMUST00000101280.10	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	36006249;36006913	36006860;36014472	+	36006249	36014472	cassetteExon	0.5	100	100	ENSMUST00000101280.10	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	36015308;36024110	36024049;36032177	+	36015308;36031984	36031977;36032177	MXE	0.5	100	100	ENSMUST00000101280.10	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	36015308;36030568	36030514;36031977	+	36015308	36031977	cassetteExon	0.5	100	100	ENSMUST00000101280.10	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	35985526	35990405	+	35985526	35989030	A3SS&ES	0.33	50	50	ENSMUST00000101280.10	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	35972007	35981369	+	35969563	35981369	A5SS	0.5	50	50	ENSMUST00000101280.10	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	35998745	36006860	+	35998745;36006249	36006148;36006860	ES	0.5	50	50	ENSMUST00000054598.12	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	36015308	36030514	+	36015308;36024110	36024049;36030514	ES	0.5	50	50	ENSMUST00000054598.12	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	35998745;36013564	36013445;36014472	+	35998745;36006913	36006148;36014472	MXE	0.5	100	100	ENSMUST00000054598.12	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	35985526	35990405	+	35985526	35990397	A3SS	0.33	50	50	ENSMUST00000054598.12	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	35998745;36013564	36013445;36014472	+	35998745;36006913	36000512;36014472	MXE	0.5	100	100	ENSMUST00000114210.9	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	36015308;36024110	36024049;36032177	+	36015308;36031984	36030514;36032177	MXE	0.5	100	100	ENSMUST00000114210.9	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	35998745	36006148	+	35998745	36000512	3pMXE	0.2	50	50	ENSMUST00000130233.8	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	35998745	36006860	+	35998745	36000512	3pMXE	0.2	50	50	ENSMUST00000130233.8	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	35998745	36013445	+	35998745	36000512	3pMXE	0.2	50	50	ENSMUST00000130233.8	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	35998745	36014472	+	35998745	36000512	3pMXE	0.2	50	50	ENSMUST00000130233.8	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	35998745	36014472	+	35998745;36006913	36006860;36014472	ES	0.25	50	50	ENSMUST00000114203.8	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	35998745;36006249	36006148;36014472	+	35998745;36006913	36006860;36014472	MXE	0.5	100	100	ENSMUST00000114203.8	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	35998745;36013564	36013445;36014472	+	35998745;36006913	36006860;36014472	MXE	0.5	100	100	ENSMUST00000114203.8	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	35998745;36006249	36006148;36014472	+	35998745	36014472	cassetteExon	0.5	100	100	ENSMUST00000151636.8	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	35998745;36013564	36013445;36014472	+	35998745	36014472	cassetteExon	0.5	100	100	ENSMUST00000151636.8	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	35998745;36006249	36006148;36014472	+	35998745;36013564	36013445;36014472	MXE	0.5	100	100	ENSMUST00000151322.8	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	35998745	36006860	+	36006249	36006860	5pMXE	0.5	50	50	ENSMUST00000153025.2	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	36015308	36030514	+	36015308	36024049	3pMXE	0.33	50	50	ENSMUST00000153025.2	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	36015308	36031977	+	36015308	36024049	3pMXE	0.33	50	50	ENSMUST00000153025.2	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	36013564	36014472	+	36006913	36014472	A5SS	0.33	50	50	ENSMUST00000153025.2	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	36024110	36030514	+	36024110	36032177	A3SS	0.5	50	50	ENSMUST00000153529.2	ENSMUSG00000029095.18	Ablim2	chr5	protein_coding	actin-binding LIM protein 2
chr5	36141650;36144665	36144399;36146898	+	36141650	36146898	cassetteExon	0.5	100	100	ENSMUST00000064571.11	ENSMUSG00000029094.13	Afap1	chr5	protein_coding	actin filament associated protein 1
chr5	36050884	36061224	+	36050884	36092896	A3SS	0.5	50	50	ENSMUST00000064571.11	ENSMUSG00000029094.13	Afap1	chr5	protein_coding	actin filament associated protein 1
chr5	36070536	36092896	+	36050884	36092896	A5SS	0.5	50	50	ENSMUST00000064571.11	ENSMUSG00000029094.13	Afap1	chr5	protein_coding	actin filament associated protein 1
chr5	36308893	36311167	-	36235382	36311167	A3SS	0.5	50	50	ENSMUST00000037370.14	ENSMUSG00000029093.15	Sorcs2	chr5	protein_coding	sortilin-related VPS10 domain containing receptor 2
chr5	36386556	36425713	-	36386556	36554910	A5SS	0.33	50	50	ENSMUST00000037370.14	ENSMUSG00000029093.15	Sorcs2	chr5	protein_coding	sortilin-related VPS10 domain containing receptor 2
chr5	36386556	36486256	-	36386556	36554910	A5SS	0.33	50	50	ENSMUST00000037370.14	ENSMUSG00000029093.15	Sorcs2	chr5	protein_coding	sortilin-related VPS10 domain containing receptor 2
chr5	36386556	36486256	-	36386556	36425713	5pMXE	0.33	50	50	ENSMUST00000135324.8	ENSMUSG00000029093.15	Sorcs2	chr5	protein_coding	sortilin-related VPS10 domain containing receptor 2
chr5	36616103	36621859	-	36613755	36621859	A3SS	0.5	50	50	ENSMUST00000149687.2	ENSMUSG00000039563.7	2210406O10Rik	chr5	lncRNA	RIKEN cDNA 2210406O10 gene
chr5	36634306	36641357	-	36634306	36641132	A5SS	0.5	50	50	ENSMUST00000031097.8	ENSMUSG00000029196.10	Tada2b	chr5	protein_coding	transcriptional adaptor 2B
chr5	36652620	36664922	-	36652620;36662478	36662369;36664922	ES	0.5	50	50	ENSMUST00000146430.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36729381	36739031	-	36729381	36731635	5pMXE	0.16	50	50	ENSMUST00000146430.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36729381	36739699	-	36729381	36731635	5pMXE	0.16	50	50	ENSMUST00000146430.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36729381	36742126	-	36729381	36731635	5pMXE	0.16	50	50	ENSMUST00000146430.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36652620;36654231	36654080;36662369	-	36652620	36662369	cassetteExon	0.5	100	100	ENSMUST00000146430.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36662451	36669798	-	36665775	36669798	A3SS&ES	0.5	50	50	ENSMUST00000146430.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36650458	36650572	-	36650458	36652362	A5SS	0.5	50	50	ENSMUST00000146430.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36680353	36682235	-	36680353	36682274	A5SS	0.5	50	50	ENSMUST00000146430.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36682392	36687645	-	36682392	36700521	A5SS	0.33	50	50	ENSMUST00000146430.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36682392	36687767	-	36682392	36700521	A5SS	0.33	50	50	ENSMUST00000146430.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36700641	36721143	-	36700641	36728640	A5SS	0.5	50	50	ENSMUST00000146430.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36729381	36730343	-	36729381	36731635	A5SS	0.16	50	50	ENSMUST00000146430.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36729381	36730724	-	36729381	36731635	A5SS	0.16	50	50	ENSMUST00000146430.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36729381	36739699	-	36729381	36739031	5pMXE	0.16	50	50	ENSMUST00000136189.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36729381	36742126	-	36729381	36739031	5pMXE	0.16	50	50	ENSMUST00000136189.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36652620	36664922	-	36652620	36662369	A5SS&ES	0.25	50	50	ENSMUST00000136189.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36729381	36730343	-	36729381	36739031	A5SS	0.16	50	50	ENSMUST00000136189.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36729381	36730724	-	36729381	36739031	A5SS	0.16	50	50	ENSMUST00000136189.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36729381	36742126	-	36729381	36739699	5pMXE	0.16	50	50	ENSMUST00000031094.15	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36729381	36730343	-	36729381	36739699	A5SS	0.16	50	50	ENSMUST00000031094.15	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36729381	36730724	-	36729381	36739699	A5SS	0.16	50	50	ENSMUST00000031094.15	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36682392	36687645	-	36682392	36687767	A5SS	0.33	50	50	ENSMUST00000171385.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36652620	36728640	-	36652620	36664922	5pMXE	0.25	50	50	ENSMUST00000173757.2	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36652620	36654080	-	36652620	36664922	A5SS	0.25	50	50	ENSMUST00000173757.2	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36742180	36749303	-	36742180	36743312	5pMXE	0.2	50	50	ENSMUST00000124036.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36742180	36765282	-	36742180	36743312	5pMXE	0.2	50	50	ENSMUST00000124036.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36729381	36730343	-	36729381	36742126	A5SS	0.16	50	50	ENSMUST00000124036.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36729381	36730724	-	36729381	36742126	A5SS	0.16	50	50	ENSMUST00000124036.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36742180	36743368	-	36742180	36743312	A5SS	0.2	50	50	ENSMUST00000124036.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36742180	36743402	-	36742180	36743312	A5SS	0.2	50	50	ENSMUST00000124036.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36742180	36749303	-	36742180	36743402	5pMXE	0.2	50	50	ENSMUST00000130417.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36742180	36765282	-	36742180	36743402	5pMXE	0.2	50	50	ENSMUST00000130417.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36742180	36743368	-	36742180	36743402	A5SS	0.2	50	50	ENSMUST00000130417.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36700641	36728640	-	36652620	36728640	A3SS	0.5	50	50	ENSMUST00000173532.2	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36652620	36654080	-	36652620	36728640	A5SS	0.25	50	50	ENSMUST00000173532.2	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36652620	36662369	-	36652620	36728640	A5SS	0.25	50	50	ENSMUST00000173532.2	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36729381	36730343	-	36729381	36730724	A5SS	0.16	50	50	ENSMUST00000140179.3	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36742180	36749303	-	36742180	36743368	5pMXE	0.2	50	50	ENSMUST00000150733.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36742180	36765282	-	36742180	36743368	5pMXE	0.2	50	50	ENSMUST00000150733.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36749486	36750502	-	36749688	36750502	A3SS	0.5	50	50	ENSMUST00000136490.8	ENSMUSG00000029192.18	Tbc1d14	chr5	protein_coding	TBC1 domain family, member 14
chr5	36760147	36765282	-	36742180	36765282	A3SS	0.33	50	50	ENSMUST00000174019.2	ENSMUSG00000106797.2	Gm42936	chr5	lncRNA	predicted gene 42936
chr5	36761952	36765282	-	36742180	36765282	A3SS	0.33	50	50	ENSMUST00000174019.2	ENSMUSG00000106797.2	Gm42936	chr5	lncRNA	predicted gene 42936
chr5	36742180	36749303	-	36742180	36765282	A5SS	0.2	50	50	ENSMUST00000174019.2	ENSMUSG00000106797.2	Gm42936	chr5	lncRNA	predicted gene 42936
chr5	36760147	36765282	-	36760147;36761952	36761855;36765282	ES	0.5	50	50	ENSMUST00000031091.13	ENSMUSG00000029190.20	D5Ertd579e	chr5	protein_coding	DNA segment, Chr 5, ERATO Doi 579, expressed
chr5	36777074	36778547	-	36777074	36787001	A5SS	0.5	50	50	ENSMUST00000031091.13	ENSMUSG00000029190.20	D5Ertd579e	chr5	protein_coding	DNA segment, Chr 5, ERATO Doi 579, expressed
chr5	36967702	36970291	-	36967752	36970291	A3SS	0.5	50	50	ENSMUST00000031002.10	ENSMUSG00000029119.10	Man2b2	chr5	protein_coding	mannosidase 2, alpha B2
chr5	37080409	37084875	+	37080409;37083794	37083629;37084875	ES	0.5	50	50	ENSMUST00000031003.11	ENSMUSG00000029120.11	Ppp2r2c	chr5	protein_coding	protein phosphatase 2, regulatory subunit B, gamma
chr5	37097135	37097441	+	37088757	37097441	A5SS	0.5	50	50	ENSMUST00000031003.11	ENSMUSG00000029120.11	Ppp2r2c	chr5	protein_coding	protein phosphatase 2, regulatory subunit B, gamma
chr5	37125794	37128902	-	37126022	37128902	A3SS	0.5	50	50	ENSMUST00000043964.13	ENSMUSG00000039474.14	Wfs1	chr5	protein_coding	wolframin ER transmembrane glycoprotein
chr5	37128967	37130530	-	37129053	37130530	A3SS	0.5	50	50	ENSMUST00000043964.13	ENSMUSG00000039474.14	Wfs1	chr5	protein_coding	wolframin ER transmembrane glycoprotein
chr5	37242842	37257980	+	37242842	37248471	3pMXE	0.5	50	50	ENSMUST00000173836.8	ENSMUSG00000063646.19	Jakmip1	chr5	protein_coding	janus kinase and microtubule interacting protein 1
chr5	37187294	37242580	+	37185943	37242580	A5SS	0.16	50	50	ENSMUST00000173836.8	ENSMUSG00000063646.19	Jakmip1	chr5	protein_coding	janus kinase and microtubule interacting protein 1
chr5	37187374	37242580	+	37185943	37242580	A5SS	0.16	50	50	ENSMUST00000173836.8	ENSMUSG00000063646.19	Jakmip1	chr5	protein_coding	janus kinase and microtubule interacting protein 1
chr5	37204576	37242580	+	37185943	37242580	A5SS	0.16	50	50	ENSMUST00000173836.8	ENSMUSG00000063646.19	Jakmip1	chr5	protein_coding	janus kinase and microtubule interacting protein 1
chr5	37204889	37242580	+	37185943	37242580	A5SS	0.16	50	50	ENSMUST00000173836.8	ENSMUSG00000063646.19	Jakmip1	chr5	protein_coding	janus kinase and microtubule interacting protein 1
chr5	37208319	37242580	+	37185943	37242580	A5SS	0.16	50	50	ENSMUST00000173836.8	ENSMUSG00000063646.19	Jakmip1	chr5	protein_coding	janus kinase and microtubule interacting protein 1
chr5	37204576	37242580	+	37187374	37242580	A5SS	0.2	50	50	ENSMUST00000172940.2	ENSMUSG00000063646.19	Jakmip1	chr5	protein_coding	janus kinase and microtubule interacting protein 1
chr5	37204889	37242580	+	37187374	37242580	A5SS	0.2	50	50	ENSMUST00000172940.2	ENSMUSG00000063646.19	Jakmip1	chr5	protein_coding	janus kinase and microtubule interacting protein 1
chr5	37208319	37242580	+	37187374	37242580	A5SS	0.2	50	50	ENSMUST00000172940.2	ENSMUSG00000063646.19	Jakmip1	chr5	protein_coding	janus kinase and microtubule interacting protein 1
chr5	37187294	37242580	+	37187374	37242580	A5SS	0.16	50	50	ENSMUST00000172917.8	ENSMUSG00000063646.19	Jakmip1	chr5	protein_coding	janus kinase and microtubule interacting protein 1
chr5	37204576	37242580	+	37187294	37242580	A5SS	0.16	50	50	ENSMUST00000174097.8	ENSMUSG00000063646.19	Jakmip1	chr5	protein_coding	janus kinase and microtubule interacting protein 1
chr5	37204889	37242580	+	37187294	37242580	A5SS	0.16	50	50	ENSMUST00000174097.8	ENSMUSG00000063646.19	Jakmip1	chr5	protein_coding	janus kinase and microtubule interacting protein 1
chr5	37208319	37242580	+	37187294	37242580	A5SS	0.16	50	50	ENSMUST00000174097.8	ENSMUSG00000063646.19	Jakmip1	chr5	protein_coding	janus kinase and microtubule interacting protein 1
chr5	37204889	37242580	+	37204576	37242580	A5SS	0.16	50	50	ENSMUST00000173048.2	ENSMUSG00000063646.19	Jakmip1	chr5	protein_coding	janus kinase and microtubule interacting protein 1
chr5	37208319	37242580	+	37204576	37242580	A5SS	0.16	50	50	ENSMUST00000173048.2	ENSMUSG00000063646.19	Jakmip1	chr5	protein_coding	janus kinase and microtubule interacting protein 1
chr5	37208319	37242580	+	37204889	37242580	A5SS	0.16	50	50	ENSMUST00000147014.2	ENSMUSG00000063646.19	Jakmip1	chr5	protein_coding	janus kinase and microtubule interacting protein 1
chr5	37242842	37257980	+	37242842;37248965	37248471;37257980	ES	0.5	50	50	ENSMUST00000137019.8	ENSMUSG00000063646.19	Jakmip1	chr5	protein_coding	janus kinase and microtubule interacting protein 1
chr5	37263095	37274786	+	37263095;37264662	37264603;37274786	ES	0.33	50	50	ENSMUST00000043794.11	ENSMUSG00000063646.19	Jakmip1	chr5	protein_coding	janus kinase and microtubule interacting protein 1
chr5	37271233	37274786	+	37264662	37274786	A5SS	0.33	50	50	ENSMUST00000043794.11	ENSMUSG00000063646.19	Jakmip1	chr5	protein_coding	janus kinase and microtubule interacting protein 1
chr5	37271233	37274786	+	37263095	37274786	A5SS	0.33	50	50	ENSMUST00000174629.2	ENSMUSG00000063646.19	Jakmip1	chr5	protein_coding	janus kinase and microtubule interacting protein 1
chr5	37332945;37336882	37336698;37339425	+	37332945	37339425	cassetteExon	0.5	100	100	ENSMUST00000232332.3	ENSMUSG00000117286.2	Gm1043	chr5	protein_coding	predicted gene 1043
chr5	37332945;37336882	37336729;37339425	+	37332945	37339425	cassetteExon	0.5	100	100	ENSMUST00000232332.3	ENSMUSG00000117286.2	Gm1043	chr5	protein_coding	predicted gene 1043
chr5	37351648;37371871	37371762;37386600	+	37351648	37386600	cassetteExon	0.5	100	100	ENSMUST00000232332.3	ENSMUSG00000117286.2	Gm1043	chr5	protein_coding	predicted gene 1043
chr5	37332945	37336729	+	37332945	37336698	A3SS	0.33	50	50	ENSMUST00000208827.2	ENSMUSG00000117286.2	Gm1043	chr5	protein_coding	predicted gene 1043
chr5	37400170	37422576	+	37399869	37422576	A5SS	0.25	50	50	ENSMUST00000202434.4	ENSMUSG00000029121.17	Crmp1	chr5	protein_coding	collapsin response mediator protein 1
chr5	37403440	37422576	+	37399869	37422576	A5SS	0.25	50	50	ENSMUST00000202434.4	ENSMUSG00000029121.17	Crmp1	chr5	protein_coding	collapsin response mediator protein 1
chr5	37404852	37422576	+	37399869	37422576	A5SS	0.25	50	50	ENSMUST00000202434.4	ENSMUSG00000029121.17	Crmp1	chr5	protein_coding	collapsin response mediator protein 1
chr5	37403440	37422576	+	37400170	37422576	A5SS	0.25	50	50	ENSMUST00000201834.4	ENSMUSG00000029121.17	Crmp1	chr5	protein_coding	collapsin response mediator protein 1
chr5	37404852	37422576	+	37400170	37422576	A5SS	0.25	50	50	ENSMUST00000201834.4	ENSMUSG00000029121.17	Crmp1	chr5	protein_coding	collapsin response mediator protein 1
chr5	37404852	37422576	+	37403440	37422576	A5SS	0.25	50	50	ENSMUST00000031004.11	ENSMUSG00000029121.17	Crmp1	chr5	protein_coding	collapsin response mediator protein 1
chr5	37490361	37493979	-	37490361	37490695	5pMXE	0.5	50	50	ENSMUST00000114154.8	ENSMUSG00000029122.12	Evc	chr5	protein_coding	EvC ciliary complex subunit 1
chr5	37471915;37472171	37472106;37473669	-	37471915	37473669	cassetteExon	0.5	100	100	ENSMUST00000114154.8	ENSMUSG00000029122.12	Evc	chr5	protein_coding	EvC ciliary complex subunit 1
chr5	37457805	37458156	-	37457844	37458156	A3SS	0.5	50	50	ENSMUST00000031005.11	ENSMUSG00000029122.12	Evc	chr5	protein_coding	EvC ciliary complex subunit 1
chr5	37547945	37549337	+	37544483	37549337	A5SS	0.5	50	50	ENSMUST00000056365.9	ENSMUSG00000050248.12	Evc2	chr5	protein_coding	EvC ciliary complex subunit 2
chr5	38051786	38053854	+	38051232	38053854	A5SS	0.33	50	50	ENSMUST00000200831.2	ENSMUSG00000106718.2	Gm20052	chr5	lncRNA	predicted gene, 20052
chr5	38052090	38053854	+	38051232	38053854	A5SS	0.33	50	50	ENSMUST00000200831.2	ENSMUSG00000106718.2	Gm20052	chr5	lncRNA	predicted gene, 20052
chr5	38052090	38053854	+	38051786	38053854	A5SS	0.33	50	50	ENSMUST00000202451.2	ENSMUSG00000106718.2	Gm20052	chr5	lncRNA	predicted gene, 20052
chr5	38196843	38262222	+	38196843;38249924	38249857;38262222	ES	0.5	50	50	ENSMUST00000114126.9	ENSMUSG00000029125.15	Stx18	chr5	protein_coding	syntaxin 18
chr5	38262337	38264170	+	38262337;38263985	38263908;38264170	ES	0.5	50	50	ENSMUST00000114126.9	ENSMUSG00000029125.15	Stx18	chr5	protein_coding	syntaxin 18
chr5	38292646	38293699	+	38292646	38293607	A3SS	0.5	50	50	ENSMUST00000114126.9	ENSMUSG00000029125.15	Stx18	chr5	protein_coding	syntaxin 18
chr5	38233963	38249857	+	38196843	38249857	A5SS	0.5	50	50	ENSMUST00000114126.9	ENSMUSG00000029125.15	Stx18	chr5	protein_coding	syntaxin 18
chr5	38268784	38273429	+	38264236	38273429	A5SS	0.5	50	50	ENSMUST00000114126.9	ENSMUSG00000029125.15	Stx18	chr5	protein_coding	syntaxin 18
chr5	38302163	38316221	-	38302163;38313068	38312952;38316221	ES	0.5	50	50	ENSMUST00000031009.8	ENSMUSG00000029126.8	Nsg1	chr5	protein_coding	neuron specific gene family member 1
chr5	38316375	38316460	-	38316375	38316735	A5SS	0.33	50	50	ENSMUST00000031009.8	ENSMUSG00000029126.8	Nsg1	chr5	protein_coding	neuron specific gene family member 1
chr5	38316375	38316643	-	38316375	38316735	A5SS	0.33	50	50	ENSMUST00000031009.8	ENSMUSG00000029126.8	Nsg1	chr5	protein_coding	neuron specific gene family member 1
chr5	38316375	38316460	-	38316375	38316643	A5SS	0.33	50	50	ENSMUST00000201363.4	ENSMUSG00000029126.8	Nsg1	chr5	protein_coding	neuron specific gene family member 1
chr5	38302163	38316221	-	38313068	38316221	3pMXE	0.5	50	50	ENSMUST00000202831.2	ENSMUSG00000029126.8	Nsg1	chr5	protein_coding	neuron specific gene family member 1
chr5	38363306	38367962	-	38363306	38363440	5pMXE	0.25	50	50	ENSMUST00000124939.8	ENSMUSG00000029127.16	Zbtb49	chr5	protein_coding	zinc finger and BTB domain containing 49
chr5	38363306	38370652	-	38363306	38363440	5pMXE	0.25	50	50	ENSMUST00000124939.8	ENSMUSG00000029127.16	Zbtb49	chr5	protein_coding	zinc finger and BTB domain containing 49
chr5	38363306	38373791	-	38363306	38363440	5pMXE	0.25	50	50	ENSMUST00000124939.8	ENSMUSG00000029127.16	Zbtb49	chr5	protein_coding	zinc finger and BTB domain containing 49
chr5	38358657	38360840	-	38349903	38360840	A3SS	0.5	50	50	ENSMUST00000124939.8	ENSMUSG00000029127.16	Zbtb49	chr5	protein_coding	zinc finger and BTB domain containing 49
chr5	38363306	38370652	-	38363306;38368008	38367962;38370652	ES	0.25	50	50	ENSMUST00000094833.10	ENSMUSG00000029127.16	Zbtb49	chr5	protein_coding	zinc finger and BTB domain containing 49
chr5	38368008	38373791	-	38368008;38371727	38370652;38373791	ES	0.25	50	50	ENSMUST00000094833.10	ENSMUSG00000029127.16	Zbtb49	chr5	protein_coding	zinc finger and BTB domain containing 49
chr5	38368008;38369432	38369190;38370652	-	38368008	38370652	cassetteExon	0.5	100	100	ENSMUST00000094833.10	ENSMUSG00000029127.16	Zbtb49	chr5	protein_coding	zinc finger and BTB domain containing 49
chr5	38371408	38373791	-	38371727	38373791	A3SS	0.25	50	50	ENSMUST00000094833.10	ENSMUSG00000029127.16	Zbtb49	chr5	protein_coding	zinc finger and BTB domain containing 49
chr5	38361171	38370652	-	38361171;38363306	38363233;38370652	ES	0.25	50	50	ENSMUST00000126267.8	ENSMUSG00000029127.16	Zbtb49	chr5	protein_coding	zinc finger and BTB domain containing 49
chr5	38363306	38373791	-	38363306;38371727	38370652;38373791	ES	0.25	50	50	ENSMUST00000126267.8	ENSMUSG00000029127.16	Zbtb49	chr5	protein_coding	zinc finger and BTB domain containing 49
chr5	38363306;38368008	38367962;38373791	-	38363306;38371727	38370652;38373791	MXE	0.5	100	100	ENSMUST00000126267.8	ENSMUSG00000029127.16	Zbtb49	chr5	protein_coding	zinc finger and BTB domain containing 49
chr5	38369432	38370652	-	38363306	38370652	A3SS	0.25	50	50	ENSMUST00000126267.8	ENSMUSG00000029127.16	Zbtb49	chr5	protein_coding	zinc finger and BTB domain containing 49
chr5	38363306;38368008	38367962;38373791	-	38363306	38373791	cassetteExon	0.5	100	100	ENSMUST00000143436.8	ENSMUSG00000029127.16	Zbtb49	chr5	protein_coding	zinc finger and BTB domain containing 49
chr5	38371408	38373791	-	38363306	38373791	A3SS	0.25	50	50	ENSMUST00000143436.8	ENSMUSG00000029127.16	Zbtb49	chr5	protein_coding	zinc finger and BTB domain containing 49
chr5	38371727	38373791	-	38363306	38373791	A3SS	0.25	50	50	ENSMUST00000143436.8	ENSMUSG00000029127.16	Zbtb49	chr5	protein_coding	zinc finger and BTB domain containing 49
chr5	38361171	38370652	-	38361171	38363233	A5SS&ES	0.5	50	50	ENSMUST00000143436.8	ENSMUSG00000029127.16	Zbtb49	chr5	protein_coding	zinc finger and BTB domain containing 49
chr5	38363306	38370652	-	38363306	38373791	A5SS	0.25	50	50	ENSMUST00000143436.8	ENSMUSG00000029127.16	Zbtb49	chr5	protein_coding	zinc finger and BTB domain containing 49
chr5	38361171;38363306	38363233;38373791	-	38361171;38371727	38370652;38373791	MXE	0.5	100	100	ENSMUST00000136475.8	ENSMUSG00000029127.16	Zbtb49	chr5	protein_coding	zinc finger and BTB domain containing 49
chr5	38368008	38370652	-	38361171	38370652	A3SS	0.25	50	50	ENSMUST00000136475.8	ENSMUSG00000029127.16	Zbtb49	chr5	protein_coding	zinc finger and BTB domain containing 49
chr5	38368008	38373791	-	38371727	38373791	A3SS&ES	0.25	50	50	ENSMUST00000136475.8	ENSMUSG00000029127.16	Zbtb49	chr5	protein_coding	zinc finger and BTB domain containing 49
chr5	38369432	38370652	-	38361171	38370652	A3SS	0.25	50	50	ENSMUST00000136475.8	ENSMUSG00000029127.16	Zbtb49	chr5	protein_coding	zinc finger and BTB domain containing 49
chr5	38363306	38373791	-	38363306;38371408	38370652;38373791	ES	0.25	50	50	ENSMUST00000138820.8	ENSMUSG00000029127.16	Zbtb49	chr5	protein_coding	zinc finger and BTB domain containing 49
chr5	38363306;38368008	38367962;38373791	-	38363306;38371408	38370652;38373791	MXE	0.5	100	100	ENSMUST00000138820.8	ENSMUSG00000029127.16	Zbtb49	chr5	protein_coding	zinc finger and BTB domain containing 49
chr5	38371408	38373791	-	38368008	38373791	A3SS	0.25	50	50	ENSMUST00000123106.5	ENSMUSG00000029127.16	Zbtb49	chr5	protein_coding	zinc finger and BTB domain containing 49
chr5	38363306	38370652	-	38363306	38367962	A5SS&ES	0.25	50	50	ENSMUST00000123106.5	ENSMUSG00000029127.16	Zbtb49	chr5	protein_coding	zinc finger and BTB domain containing 49
chr5	38368008	38369190	-	38368008	38373791	A5SS	0.33	50	50	ENSMUST00000123106.5	ENSMUSG00000029127.16	Zbtb49	chr5	protein_coding	zinc finger and BTB domain containing 49
chr5	38368008	38370652	-	38368008	38373791	A5SS	0.33	50	50	ENSMUST00000123106.5	ENSMUSG00000029127.16	Zbtb49	chr5	protein_coding	zinc finger and BTB domain containing 49
chr5	38382141	38385199	+	38382141;38383347	38383233;38385199	ES	0.5	50	50	ENSMUST00000087514.9	ENSMUSG00000067367.10	Lyar	chr5	protein_coding	Ly1 antibody reactive clone
chr5	38377979;38380571	38380275;38381971	+	38377979	38381971	cassetteExon	0.5	100	100	ENSMUST00000087514.9	ENSMUSG00000067367.10	Lyar	chr5	protein_coding	Ly1 antibody reactive clone
chr5	38377979;38380575	38380275;38381971	+	38377979	38381971	cassetteExon	0.5	100	100	ENSMUST00000087514.9	ENSMUSG00000067367.10	Lyar	chr5	protein_coding	Ly1 antibody reactive clone
chr5	38377979;38380571	38380478;38381971	+	38377979	38381971	cassetteExon	0.5	100	100	ENSMUST00000087514.9	ENSMUSG00000067367.10	Lyar	chr5	protein_coding	Ly1 antibody reactive clone
chr5	38377979;38380575	38380478;38381971	+	38377979	38381971	cassetteExon	0.5	100	100	ENSMUST00000087514.9	ENSMUSG00000067367.10	Lyar	chr5	protein_coding	Ly1 antibody reactive clone
chr5	38377979	38382062	+	38377979	38381971	A3SS	0.25	50	50	ENSMUST00000087514.9	ENSMUSG00000067367.10	Lyar	chr5	protein_coding	Ly1 antibody reactive clone
chr5	38378133	38381971	+	38377979	38381971	A5SS	0.2	50	50	ENSMUST00000087514.9	ENSMUSG00000067367.10	Lyar	chr5	protein_coding	Ly1 antibody reactive clone
chr5	38378138	38381971	+	38377979	38381971	A5SS	0.2	50	50	ENSMUST00000087514.9	ENSMUSG00000067367.10	Lyar	chr5	protein_coding	Ly1 antibody reactive clone
chr5	38377979;38380398	38380275;38380478	+	38377979	38380478	cassetteExon	0.5	100	100	ENSMUST00000130721.8	ENSMUSG00000067367.10	Lyar	chr5	protein_coding	Ly1 antibody reactive clone
chr5	38377979	38382062	+	38377979	38380478	A3SS&ES	0.25	50	50	ENSMUST00000130721.8	ENSMUSG00000067367.10	Lyar	chr5	protein_coding	Ly1 antibody reactive clone
chr5	38378133	38381971	+	38380575	38381971	A5SS&ES	0.2	50	50	ENSMUST00000130721.8	ENSMUSG00000067367.10	Lyar	chr5	protein_coding	Ly1 antibody reactive clone
chr5	38378138	38381971	+	38380575	38381971	A5SS&ES	0.2	50	50	ENSMUST00000130721.8	ENSMUSG00000067367.10	Lyar	chr5	protein_coding	Ly1 antibody reactive clone
chr5	38380571	38381971	+	38380575	38381971	A5SS	0.2	50	50	ENSMUST00000130721.8	ENSMUSG00000067367.10	Lyar	chr5	protein_coding	Ly1 antibody reactive clone
chr5	38378133	38381971	+	38380571	38381971	A5SS&ES	0.2	50	50	ENSMUST00000123207.8	ENSMUSG00000067367.10	Lyar	chr5	protein_coding	Ly1 antibody reactive clone
chr5	38378138	38381971	+	38380571	38381971	A5SS&ES	0.2	50	50	ENSMUST00000123207.8	ENSMUSG00000067367.10	Lyar	chr5	protein_coding	Ly1 antibody reactive clone
chr5	38378138	38381971	+	38378133	38381971	A5SS	0.2	50	50	ENSMUST00000132190.8	ENSMUSG00000067367.10	Lyar	chr5	protein_coding	Ly1 antibody reactive clone
chr5	38377979	38380275	+	38377979	38382062	A3SS	0.25	50	50	ENSMUST00000202506.2	ENSMUSG00000067367.10	Lyar	chr5	protein_coding	Ly1 antibody reactive clone
chr5	38382141	38385199	+	38382141	38383233	3pMXE	0.5	50	50	ENSMUST00000152066.8	ENSMUSG00000067367.10	Lyar	chr5	protein_coding	Ly1 antibody reactive clone
chr5	38377979	38380478	+	38380398	38380478	5pMXE	0.5	50	50	ENSMUST00000146401.2	ENSMUSG00000067367.10	Lyar	chr5	protein_coding	Ly1 antibody reactive clone
chr5	38422314;38423894	38423862;38424523	+	38422314	38424523	cassetteExon	0.5	100	100	ENSMUST00000087511.10	ENSMUSG00000067365.12	Tmem128	chr5	protein_coding	transmembrane protein 128
chr5	38424628	38425042	+	38424628	38426403	A3SS	0.5	50	50	ENSMUST00000087511.10	ENSMUSG00000067365.12	Tmem128	chr5	protein_coding	transmembrane protein 128
chr5	38443560	38445241	+	38435168	38445241	A5SS	0.5	50	50	ENSMUST00000063136.15	ENSMUSG00000051596.16	Otop1	chr5	protein_coding	otopetrin 1
chr5	38549167	38574518	-	38549167;38556232	38556045;38574518	ES	0.33	50	50	ENSMUST00000067886.12	ENSMUSG00000005107.14	Slc2a9	chr5	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 9
chr5	38634836	38640648	-	38634836	38637382	5pMXE	0.33	50	50	ENSMUST00000067886.12	ENSMUSG00000005107.14	Slc2a9	chr5	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 9
chr5	38634836	38640660	-	38634836	38637382	5pMXE	0.33	50	50	ENSMUST00000067886.12	ENSMUSG00000005107.14	Slc2a9	chr5	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 9
chr5	38573093	38574518	-	38556232	38574518	A3SS	0.33	50	50	ENSMUST00000067886.12	ENSMUSG00000005107.14	Slc2a9	chr5	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 9
chr5	38633990	38634738	-	38610605	38634738	A3SS	0.5	50	50	ENSMUST00000067886.12	ENSMUSG00000005107.14	Slc2a9	chr5	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 9
chr5	38634836	38640648	-	38634836	38640660	A5SS	0.33	50	50	ENSMUST00000067872.12	ENSMUSG00000005107.14	Slc2a9	chr5	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 9
chr5	38640728	38658983	-	38640728	38649241	5pMXE	0.33	50	50	ENSMUST00000129099.8	ENSMUSG00000005107.14	Slc2a9	chr5	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 9
chr5	38640728	38659302	-	38640728	38649241	5pMXE	0.33	50	50	ENSMUST00000129099.8	ENSMUSG00000005107.14	Slc2a9	chr5	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 9
chr5	38549167;38574650	38574518;38593883	-	38549167	38593883	cassetteExon	0.5	100	100	ENSMUST00000005238.13	ENSMUSG00000005107.14	Slc2a9	chr5	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 9
chr5	38640728;38659059	38658983;38659302	-	38640728	38659302	cassetteExon	0.5	100	100	ENSMUST00000005238.13	ENSMUSG00000005107.14	Slc2a9	chr5	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 9
chr5	38549167	38556045	-	38549167	38593883	A5SS	0.33	50	50	ENSMUST00000005238.13	ENSMUSG00000005107.14	Slc2a9	chr5	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 9
chr5	38573093	38574518	-	38549167	38574518	A3SS	0.33	50	50	ENSMUST00000122970.8	ENSMUSG00000005107.14	Slc2a9	chr5	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 9
chr5	38718544	38720433	-	38718544	38718859	5pMXE	0.5	50	50	ENSMUST00000005234.13	ENSMUSG00000005103.13	Wdr1	chr5	protein_coding	WD repeat domain 1
chr5	38718539	38718859	-	38718544	38718859	A3SS	0.5	50	50	ENSMUST00000005234.13	ENSMUSG00000005103.13	Wdr1	chr5	protein_coding	WD repeat domain 1
chr5	38687012	38687115	-	38687012	38687280	A5SS	0.5	50	50	ENSMUST00000005234.13	ENSMUSG00000005103.13	Wdr1	chr5	protein_coding	WD repeat domain 1
chr5	38688468	38689278	-	38688468	38690827	A5SS	0.5	50	50	ENSMUST00000005234.13	ENSMUSG00000005103.13	Wdr1	chr5	protein_coding	WD repeat domain 1
chr5	38840125;38840601	38840536;38842022	-	38840125	38842022	cassetteExon	0.5	100	100	ENSMUST00000179555.8	ENSMUSG00000046572.11	Zfp518b	chr5	protein_coding	zinc finger protein 518B
chr5	38832017	38839828	-	38832196	38839828	A3SS	0.5	50	50	ENSMUST00000179555.8	ENSMUSG00000046572.11	Zfp518b	chr5	protein_coding	zinc finger protein 518B
chr5	38893700	38899593	-	38893700	38896685	A5SS&ES	0.5	50	50	ENSMUST00000169819.5	ENSMUSG00000039315.16	Clnk	chr5	protein_coding	cytokine-dependent hematopoietic cell linker
chr5	38901559	38905120	+	38901559	38905119	A3SS	0.5	50	50	ENSMUST00000114080.9	ENSMUSG00000079528.10	Clnkos	chr5	lncRNA	cytokine-dependent hematopoietic cell linker, opposite strand
chr5	39634465;39644380	39644296;39666996	-	39634465	39666996	cassetteExon	0.5	100	100	ENSMUST00000202800.4	ENSMUSG00000106741.4	4930513D17Rik	chr5	lncRNA	RIKEN cDNA 4930513D17 gene
chr5	39772747	39801561	-	39772747	39907173	A5SS	0.25	50	50	ENSMUST00000117944.2	ENSMUSG00000051022.8	Hs3st1	chr5	protein_coding	heparan sulfate (glucosamine) 3-O-sulfotransferase 1
chr5	39772747	39801760	-	39772747	39907173	A5SS	0.25	50	50	ENSMUST00000117944.2	ENSMUSG00000051022.8	Hs3st1	chr5	protein_coding	heparan sulfate (glucosamine) 3-O-sulfotransferase 1
chr5	39772747	39802463	-	39772747	39907173	A5SS	0.25	50	50	ENSMUST00000117944.2	ENSMUSG00000051022.8	Hs3st1	chr5	protein_coding	heparan sulfate (glucosamine) 3-O-sulfotransferase 1
chr5	39772747	39802463	-	39772747	39801760	5pMXE	0.25	50	50	ENSMUST00000053116.7	ENSMUSG00000051022.8	Hs3st1	chr5	protein_coding	heparan sulfate (glucosamine) 3-O-sulfotransferase 1
chr5	39772747	39801561	-	39772747	39801760	A5SS	0.25	50	50	ENSMUST00000053116.7	ENSMUSG00000051022.8	Hs3st1	chr5	protein_coding	heparan sulfate (glucosamine) 3-O-sulfotransferase 1
chr5	39772747	39801561	-	39772747	39802463	A5SS	0.25	50	50	ENSMUST00000137142.2	ENSMUSG00000051022.8	Hs3st1	chr5	protein_coding	heparan sulfate (glucosamine) 3-O-sulfotransferase 1
chr5	41783205	41790516	-	41783205;41784424	41784330;41790516	ES	0.33	50	50	ENSMUST00000201422.4	ENSMUSG00000029128.13	Rab28	chr5	protein_coding	RAB28, member RAS oncogene family
chr5	41782431	41790516	-	41784424	41790516	A3SS&ES	0.33	50	50	ENSMUST00000201422.4	ENSMUSG00000029128.13	Rab28	chr5	protein_coding	RAB28, member RAS oncogene family
chr5	41782431	41790516	-	41783205	41790516	A3SS	0.33	50	50	ENSMUST00000031011.12	ENSMUSG00000029128.13	Rab28	chr5	protein_coding	RAB28, member RAS oncogene family
chr5	41783205	41790516	-	41783205	41784330	5pMXE	0.5	50	50	ENSMUST00000200702.2	ENSMUSG00000029128.13	Rab28	chr5	protein_coding	RAB28, member RAS oncogene family
chr5	41946292	41951570	-	41946292;41949280	41949140;41951570	ES	0.5	50	50	ENSMUST00000050556.11	ENSMUSG00000061755.11	Bod1l	chr5	protein_coding	biorientation of chromosomes in cell division 1-like
chr5	41979503;41980689	41980637;41981312	-	41979503	41981312	cassetteExon	0.5	100	100	ENSMUST00000050556.11	ENSMUSG00000061755.11	Bod1l	chr5	protein_coding	biorientation of chromosomes in cell division 1-like
chr5	43347685	43348637	-	43344948	43348637	A3SS	0.5	50	50	ENSMUST00000187911.7	ENSMUSG00000085720.9	Gm7854	chr5	lncRNA	predicted gene 7854
chr5	43344948	43346174	-	43344948	43348637	A5SS	0.5	50	50	ENSMUST00000187911.7	ENSMUSG00000085720.9	Gm7854	chr5	lncRNA	predicted gene 7854
chr5	43394931	43401929	+	43394931;43395759	43395670;43401929	ES	0.5	50	50	ENSMUST00000166713.9	ENSMUSG00000039782.16	Cpeb2	chr5	protein_coding	cytoplasmic polyadenylation element binding protein 2
chr5	43419127	43434774	+	43419127;43426235	43426212;43434774	ES	0.5	50	50	ENSMUST00000166713.9	ENSMUSG00000039782.16	Cpeb2	chr5	protein_coding	cytoplasmic polyadenylation element binding protein 2
chr5	43392431	43392829	+	43392431	43394650	A3SS	0.5	50	50	ENSMUST00000166713.9	ENSMUSG00000039782.16	Cpeb2	chr5	protein_coding	cytoplasmic polyadenylation element binding protein 2
chr5	43402019	43403627	+	43402019	43419077	A3SS	0.5	50	50	ENSMUST00000166713.9	ENSMUSG00000039782.16	Cpeb2	chr5	protein_coding	cytoplasmic polyadenylation element binding protein 2
chr5	43394940	43395670	+	43394931	43395670	A5SS	0.5	50	50	ENSMUST00000166713.9	ENSMUSG00000039782.16	Cpeb2	chr5	protein_coding	cytoplasmic polyadenylation element binding protein 2
chr5	43394931	43401929	+	43395759	43401929	A5SS&ES	0.5	50	50	ENSMUST00000127599.3	ENSMUSG00000039782.16	Cpeb2	chr5	protein_coding	cytoplasmic polyadenylation element binding protein 2
chr5	43673329;43723964	43723752;43766395	+	43673329	43766395	cassetteExon	0.5	100	100	ENSMUST00000076939.10	ENSMUSG00000061535.12	C1qtnf7	chr5	protein_coding	C1q and tumor necrosis factor related protein 7
chr5	43759324	43766395	+	43673329	43766395	A5SS	0.33	50	50	ENSMUST00000076939.10	ENSMUSG00000061535.12	C1qtnf7	chr5	protein_coding	C1q and tumor necrosis factor related protein 7
chr5	43759324	43766395	+	43723964	43766395	A5SS	0.33	50	50	ENSMUST00000144558.3	ENSMUSG00000061535.12	C1qtnf7	chr5	protein_coding	C1q and tumor necrosis factor related protein 7
chr5	43873187	43875895	+	43873187;43874293	43874279;43875895	ES	0.5	50	50	ENSMUST00000048150.15	ENSMUSG00000039765.16	Cc2d2a	chr5	protein_coding	coiled-coil and C2 domain containing 2A
chr5	43883714	43887199	+	43883714;43885633	43885613;43887199	ES	0.5	50	50	ENSMUST00000048150.15	ENSMUSG00000039765.16	Cc2d2a	chr5	protein_coding	coiled-coil and C2 domain containing 2A
chr5	43829746	43831034	+	43828646	43831034	A5SS	0.5	50	50	ENSMUST00000048150.15	ENSMUSG00000039765.16	Cc2d2a	chr5	protein_coding	coiled-coil and C2 domain containing 2A
chr5	43925592	43930786	-	43925592;43928174	43928079;43930786	ES	0.5	50	50	ENSMUST00000119523.8	ENSMUSG00000039753.17	Fbxl5	chr5	protein_coding	F-box and leucine-rich repeat protein 5
chr5	43928174	43939307	-	43928174;43930950	43930786;43939307	ES	0.25	50	50	ENSMUST00000119523.8	ENSMUSG00000039753.17	Fbxl5	chr5	protein_coding	F-box and leucine-rich repeat protein 5
chr5	43918194	43920159	-	43918197	43920159	A3SS	0.5	50	50	ENSMUST00000119523.8	ENSMUSG00000039753.17	Fbxl5	chr5	protein_coding	F-box and leucine-rich repeat protein 5
chr5	43930872	43939307	-	43930950	43939307	A3SS	0.25	50	50	ENSMUST00000119523.8	ENSMUSG00000039753.17	Fbxl5	chr5	protein_coding	F-box and leucine-rich repeat protein 5
chr5	43931001	43939307	-	43930950	43939307	A3SS	0.25	50	50	ENSMUST00000119523.8	ENSMUSG00000039753.17	Fbxl5	chr5	protein_coding	F-box and leucine-rich repeat protein 5
chr5	43928174	43939307	-	43928174;43931001	43930786;43939307	ES	0.25	50	50	ENSMUST00000196483.5	ENSMUSG00000039753.17	Fbxl5	chr5	protein_coding	F-box and leucine-rich repeat protein 5
chr5	43931001	43978883	-	43931001	43939307	5pMXE	0.5	50	50	ENSMUST00000196483.5	ENSMUSG00000039753.17	Fbxl5	chr5	protein_coding	F-box and leucine-rich repeat protein 5
chr5	43930872	43939307	-	43931001	43939307	A3SS	0.25	50	50	ENSMUST00000196483.5	ENSMUSG00000039753.17	Fbxl5	chr5	protein_coding	F-box and leucine-rich repeat protein 5
chr5	43928174	43939307	-	43928174	43930786	A5SS&ES	0.5	50	50	ENSMUST00000114047.10	ENSMUSG00000039753.17	Fbxl5	chr5	protein_coding	F-box and leucine-rich repeat protein 5
chr5	43928174	43939307	-	43928174;43930872	43930786;43939307	ES	0.25	50	50	ENSMUST00000121736.6	ENSMUSG00000039753.17	Fbxl5	chr5	protein_coding	F-box and leucine-rich repeat protein 5
chr5	43925592;43930872	43930786;43939307	-	43925592;43928174	43928079;43939307	MXE	0.5	100	100	ENSMUST00000199055.2	ENSMUSG00000039753.17	Fbxl5	chr5	protein_coding	F-box and leucine-rich repeat protein 5
chr5	43925592;43930950	43930786;43939307	-	43925592;43928174	43928079;43939307	MXE	0.5	100	100	ENSMUST00000199055.2	ENSMUSG00000039753.17	Fbxl5	chr5	protein_coding	F-box and leucine-rich repeat protein 5
chr5	43925592;43931001	43930786;43939307	-	43925592;43928174	43928079;43939307	MXE	0.5	100	100	ENSMUST00000199055.2	ENSMUSG00000039753.17	Fbxl5	chr5	protein_coding	F-box and leucine-rich repeat protein 5
chr5	43976435;43977946	43977820;43978952	+	43976435	43978952	cassetteExon	0.5	100	100	ENSMUST00000126976.6	ENSMUSG00000029082.18	Bst1	chr5	protein_coding	bone marrow stromal cell antigen 1
chr5	43994889	43999339	+	43994889;43997832	43997773;43999339	ES	0.5	50	50	ENSMUST00000101237.8	ENSMUSG00000029082.18	Bst1	chr5	protein_coding	bone marrow stromal cell antigen 1
chr5	44137310	44139055	-	44137310;44138035	44137986;44139055	ES	0.5	50	50	ENSMUST00000199894.2	ENSMUSG00000048373.9	Fgfbp1	chr5	protein_coding	fibroblast growth factor binding protein 1
chr5	44152456	44158612	-	44152456;44158187	44158119;44158612	ES	0.5	50	50	ENSMUST00000074113.13	ENSMUSG00000029086.16	Prom1	chr5	protein_coding	prominin 1
chr5	44178273	44186952	-	44178273;44184177	44184025;44186952	ES	0.5	50	50	ENSMUST00000074113.13	ENSMUSG00000029086.16	Prom1	chr5	protein_coding	prominin 1
chr5	44190349	44194766	-	44190349;44191763	44191689;44194766	ES	0.5	50	50	ENSMUST00000074113.13	ENSMUSG00000029086.16	Prom1	chr5	protein_coding	prominin 1
chr5	44213425	44220468	-	44213425;44215994	44215968;44220468	ES	0.33	50	50	ENSMUST00000074113.13	ENSMUSG00000029086.16	Prom1	chr5	protein_coding	prominin 1
chr5	44168590;44169858	44169841;44170218	-	44168590	44170218	cassetteExon	0.5	100	100	ENSMUST00000074113.13	ENSMUSG00000029086.16	Prom1	chr5	protein_coding	prominin 1
chr5	44158890	44159128	-	44158635	44159128	A3SS	0.33	50	50	ENSMUST00000074113.13	ENSMUSG00000029086.16	Prom1	chr5	protein_coding	prominin 1
chr5	44213410	44220468	-	44215994	44220468	A3SS&ES	0.33	50	50	ENSMUST00000074113.13	ENSMUSG00000029086.16	Prom1	chr5	protein_coding	prominin 1
chr5	44190349	44191666	-	44190349	44191689	A5SS	0.33	50	50	ENSMUST00000074113.13	ENSMUSG00000029086.16	Prom1	chr5	protein_coding	prominin 1
chr5	44220526	44223017	-	44220526	44251737	A5SS	0.5	50	50	ENSMUST00000074113.13	ENSMUSG00000029086.16	Prom1	chr5	protein_coding	prominin 1
chr5	44252110	44256016	-	44252110	44258990	A5SS	0.25	50	50	ENSMUST00000074113.13	ENSMUSG00000029086.16	Prom1	chr5	protein_coding	prominin 1
chr5	44252110	44256382	-	44252110	44258990	A5SS	0.25	50	50	ENSMUST00000074113.13	ENSMUSG00000029086.16	Prom1	chr5	protein_coding	prominin 1
chr5	44252110	44259276	-	44252110	44258990	A5SS	0.25	50	50	ENSMUST00000074113.13	ENSMUSG00000029086.16	Prom1	chr5	protein_coding	prominin 1
chr5	44152456	44159128	-	44152456;44158635	44158612;44159128	ES	0.33	50	50	ENSMUST00000196378.5	ENSMUSG00000029086.16	Prom1	chr5	protein_coding	prominin 1
chr5	44252110	44259276	-	44252110	44256016	5pMXE	0.25	50	50	ENSMUST00000165909.8	ENSMUSG00000029086.16	Prom1	chr5	protein_coding	prominin 1
chr5	44152456;44158890	44158612;44159128	-	44152456	44159128	cassetteExon	0.5	100	100	ENSMUST00000165909.8	ENSMUSG00000029086.16	Prom1	chr5	protein_coding	prominin 1
chr5	44213410	44220468	-	44213425	44220468	A3SS	0.33	50	50	ENSMUST00000165909.8	ENSMUSG00000029086.16	Prom1	chr5	protein_coding	prominin 1
chr5	44152456	44158119	-	44152456	44159128	A5SS	0.33	50	50	ENSMUST00000165909.8	ENSMUSG00000029086.16	Prom1	chr5	protein_coding	prominin 1
chr5	44252110	44256382	-	44252110	44256016	A5SS	0.25	50	50	ENSMUST00000165909.8	ENSMUSG00000029086.16	Prom1	chr5	protein_coding	prominin 1
chr5	44257822	44259276	-	44252110	44259276	A3SS	0.5	50	50	ENSMUST00000171543.8	ENSMUSG00000029086.16	Prom1	chr5	protein_coding	prominin 1
chr5	44252110	44256382	-	44252110	44259276	A5SS	0.25	50	50	ENSMUST00000171543.8	ENSMUSG00000029086.16	Prom1	chr5	protein_coding	prominin 1
chr5	44152456	44159128	-	44158890	44159128	3pMXE	0.33	50	50	ENSMUST00000197750.5	ENSMUSG00000029086.16	Prom1	chr5	protein_coding	prominin 1
chr5	44190349;44191763	44191666;44194766	-	44190349	44194766	cassetteExon	0.5	100	100	ENSMUST00000197706.5	ENSMUSG00000029086.16	Prom1	chr5	protein_coding	prominin 1
chr5	44168590	44170218	-	44169858	44170218	3pMXE	0.5	50	50	ENSMUST00000196853.2	ENSMUSG00000029086.16	Prom1	chr5	protein_coding	prominin 1
chr5	44178273	44186952	-	44184177	44186952	3pMXE	0.5	50	50	ENSMUST00000198347.2	ENSMUSG00000029086.16	Prom1	chr5	protein_coding	prominin 1
chr5	44190349	44194766	-	44191763	44194766	3pMXE	0.5	50	50	ENSMUST00000199739.2	ENSMUSG00000029086.16	Prom1	chr5	protein_coding	prominin 1
chr5	44241784	44246706	-	44225993	44246706	A3SS	0.5	50	50	ENSMUST00000196003.2	ENSMUSG00000105264.2	Gm42716	chr5	lncRNA	predicted gene 42716
chr5	44361670	44383756	-	44361670;44375576	44375446;44383756	ES	0.5	50	50	ENSMUST00000055128.12	ENSMUSG00000046985.12	Tapt1	chr5	protein_coding	transmembrane anterior posterior transformation 1
chr5	44351752;44356720	44356655;44361552	-	44351752	44361552	cassetteExon	0.5	100	100	ENSMUST00000055128.12	ENSMUSG00000046985.12	Tapt1	chr5	protein_coding	transmembrane anterior posterior transformation 1
chr5	44361670	44383756	-	44361670	44375446	5pMXE	0.5	50	50	ENSMUST00000197266.5	ENSMUSG00000046985.12	Tapt1	chr5	protein_coding	transmembrane anterior posterior transformation 1
chr5	44361670	44383756	-	44375576	44383756	3pMXE	0.5	50	50	ENSMUST00000196151.2	ENSMUSG00000046985.12	Tapt1	chr5	protein_coding	transmembrane anterior posterior transformation 1
chr5	44630854	44636435	-	44630854;44633977	44633835;44636435	ES	0.5	50	50	ENSMUST00000199534.5	ENSMUSG00000039706.12	Ldb2	chr5	protein_coding	LIM domain binding 2
chr5	44684704	44690003	-	44637691	44690003	A3SS	0.5	50	50	ENSMUST00000199534.5	ENSMUSG00000039706.12	Ldb2	chr5	protein_coding	LIM domain binding 2
chr5	44630854	44636441	-	44630854	44633835	A5SS&ES	0.33	50	50	ENSMUST00000199534.5	ENSMUSG00000039706.12	Ldb2	chr5	protein_coding	LIM domain binding 2
chr5	44633977	44636441	-	44633977	44636435	A5SS	0.5	50	50	ENSMUST00000199534.5	ENSMUSG00000039706.12	Ldb2	chr5	protein_coding	LIM domain binding 2
chr5	44699201	44751192	-	44699201	44826699	A5SS	0.5	50	50	ENSMUST00000199534.5	ENSMUSG00000039706.12	Ldb2	chr5	protein_coding	LIM domain binding 2
chr5	44630854	44636441	-	44630854	44636435	A5SS	0.33	50	50	ENSMUST00000070748.10	ENSMUSG00000039706.12	Ldb2	chr5	protein_coding	LIM domain binding 2
chr5	44630854	44636441	-	44630854;44633977	44633835;44636441	ES	0.5	50	50	ENSMUST00000199256.5	ENSMUSG00000039706.12	Ldb2	chr5	protein_coding	LIM domain binding 2
chr5	44630854	44636435	-	44630854	44633835	A5SS&ES	0.33	50	50	ENSMUST00000199256.5	ENSMUSG00000039706.12	Ldb2	chr5	protein_coding	LIM domain binding 2
chr5	45269104	45312240	-	45169718	45312240	A3SS	0.5	50	50	ENSMUST00000197016.5	ENSMUSG00000029092.10	D5Ertd615e	chr5	lncRNA	DNA segment, Chr 5, ERATO Doi 615, expressed
chr5	45312407	45320642	-	45312407	45461522	A5SS	0.5	50	50	ENSMUST00000197016.5	ENSMUSG00000029092.10	D5Ertd615e	chr5	lncRNA	DNA segment, Chr 5, ERATO Doi 615, expressed
chr5	45592020	45596627	-	45592020;45595268	45595185;45596627	ES	0.5	50	50	ENSMUST00000198258.5	ENSMUSG00000015806.13	Qdpr	chr5	protein_coding	quinoid dihydropteridine reductase
chr5	45600919;45602085	45601854;45604918	-	45600919	45604918	cassetteExon	0.5	100	100	ENSMUST00000198258.5	ENSMUSG00000015806.13	Qdpr	chr5	protein_coding	quinoid dihydropteridine reductase
chr5	45600919;45602085	45601989;45604918	-	45600919	45604918	cassetteExon	0.5	100	100	ENSMUST00000198258.5	ENSMUSG00000015806.13	Qdpr	chr5	protein_coding	quinoid dihydropteridine reductase
chr5	45605010	45605435	-	45605010	45607432	A5SS	0.2	50	50	ENSMUST00000198258.5	ENSMUSG00000015806.13	Qdpr	chr5	protein_coding	quinoid dihydropteridine reductase
chr5	45605010	45605934	-	45605010	45607432	A5SS	0.2	50	50	ENSMUST00000198258.5	ENSMUSG00000015806.13	Qdpr	chr5	protein_coding	quinoid dihydropteridine reductase
chr5	45605010	45607224	-	45605010	45607432	A5SS	0.2	50	50	ENSMUST00000198258.5	ENSMUSG00000015806.13	Qdpr	chr5	protein_coding	quinoid dihydropteridine reductase
chr5	45605010	45607349	-	45605010	45607432	A5SS	0.2	50	50	ENSMUST00000198258.5	ENSMUSG00000015806.13	Qdpr	chr5	protein_coding	quinoid dihydropteridine reductase
chr5	45602085;45604889	45604797;45607349	-	45602085;45605010	45604918;45607349	MXE	0.5	100	100	ENSMUST00000197946.5	ENSMUSG00000015806.13	Qdpr	chr5	protein_coding	quinoid dihydropteridine reductase
chr5	45605010;45605984	45605934;45607349	-	45605010	45607349	cassetteExon	0.5	100	100	ENSMUST00000197946.5	ENSMUSG00000015806.13	Qdpr	chr5	protein_coding	quinoid dihydropteridine reductase
chr5	45600919	45601854	-	45600919	45601989	A5SS	0.33	50	50	ENSMUST00000197946.5	ENSMUSG00000015806.13	Qdpr	chr5	protein_coding	quinoid dihydropteridine reductase
chr5	45605010	45605435	-	45605010	45607349	A5SS	0.2	50	50	ENSMUST00000197946.5	ENSMUSG00000015806.13	Qdpr	chr5	protein_coding	quinoid dihydropteridine reductase
chr5	45605010	45607224	-	45605010	45607349	A5SS	0.2	50	50	ENSMUST00000197946.5	ENSMUSG00000015806.13	Qdpr	chr5	protein_coding	quinoid dihydropteridine reductase
chr5	45605010	45605934	-	45605010	45605435	5pMXE	0.2	50	50	ENSMUST00000117425.8	ENSMUSG00000015806.13	Qdpr	chr5	protein_coding	quinoid dihydropteridine reductase
chr5	45605010	45607224	-	45605010	45605435	5pMXE	0.2	50	50	ENSMUST00000117425.8	ENSMUSG00000015806.13	Qdpr	chr5	protein_coding	quinoid dihydropteridine reductase
chr5	45602085	45604797	-	45602085	45604918	A5SS	0.5	50	50	ENSMUST00000117425.8	ENSMUSG00000015806.13	Qdpr	chr5	protein_coding	quinoid dihydropteridine reductase
chr5	45605010	45605934	-	45605010	45607224	A5SS	0.2	50	50	ENSMUST00000120867.8	ENSMUSG00000015806.13	Qdpr	chr5	protein_coding	quinoid dihydropteridine reductase
chr5	45600919	45604918	-	45600919	45601854	5pMXE	0.33	50	50	ENSMUST00000149290.3	ENSMUSG00000015806.13	Qdpr	chr5	protein_coding	quinoid dihydropteridine reductase
chr5	45600919;45605010	45604918;45607349	-	45600919;45604889	45601989;45607349	MXE	0.5	100	100	ENSMUST00000154962.8	ENSMUSG00000015806.13	Qdpr	chr5	protein_coding	quinoid dihydropteridine reductase
chr5	45605984	45607349	-	45604889	45607349	A3SS	0.33	50	50	ENSMUST00000154962.8	ENSMUSG00000015806.13	Qdpr	chr5	protein_coding	quinoid dihydropteridine reductase
chr5	45602085;45604889	45604797;45607349	-	45602085;45605984	45604918;45607349	MXE	0.5	100	100	ENSMUST00000127562.3	ENSMUSG00000015806.13	Qdpr	chr5	protein_coding	quinoid dihydropteridine reductase
chr5	45652623	45654262	+	45652623	45657745	A3SS	0.5	50	50	ENSMUST00000198534.2	ENSMUSG00000039682.13	Lap3	chr5	protein_coding	leucine aminopeptidase 3
chr5	45655935	45657745	+	45652623	45657745	A5SS	0.5	50	50	ENSMUST00000198534.2	ENSMUSG00000039682.13	Lap3	chr5	protein_coding	leucine aminopeptidase 3
chr5	45679844	45682495	+	45679844;45680876	45680764;45682495	ES	0.33	50	50	ENSMUST00000156481.8	ENSMUSG00000015804.15	Med28	chr5	protein_coding	mediator complex subunit 28
chr5	45678493	45679778	+	45677826	45679778	A5SS	0.5	50	50	ENSMUST00000156481.8	ENSMUSG00000015804.15	Med28	chr5	protein_coding	mediator complex subunit 28
chr5	45677826;45679844	45679778;45682495	+	45677826	45682495	cassetteExon	0.5	100	100	ENSMUST00000119579.3	ENSMUSG00000015804.15	Med28	chr5	protein_coding	mediator complex subunit 28
chr5	45680876	45682495	+	45677826	45682495	A5SS	0.33	50	50	ENSMUST00000119579.3	ENSMUSG00000015804.15	Med28	chr5	protein_coding	mediator complex subunit 28
chr5	45796878;45797688	45797631;45798943	+	45796878	45798943	cassetteExon	0.5	100	100	ENSMUST00000181335.3	ENSMUSG00000097825.6	9630001P10Rik	chr5	lncRNA	RIKEN cDNA 9630001P10 gene
chr5	45796844	45797631	+	45796878	45797631	A5SS	0.5	50	50	ENSMUST00000181083.6	ENSMUSG00000097825.6	9630001P10Rik	chr5	lncRNA	RIKEN cDNA 9630001P10 gene
chr5	45796878	45798943	+	45797688	45798943	A5SS&ES	0.5	50	50	ENSMUST00000200144.2	ENSMUSG00000097825.6	9630001P10Rik	chr5	lncRNA	RIKEN cDNA 9630001P10 gene
chr5	45859339	45904398	-	45859339;45893166	45893073;45904398	ES	0.5	50	50	ENSMUST00000045586.13	ENSMUSG00000015882.19	Lcorl	chr5	protein_coding	ligand dependent nuclear receptor corepressor-like
chr5	45933841	46014689	-	45933841;45952700	45952635;46014689	ES	0.5	50	50	ENSMUST00000045586.13	ENSMUSG00000015882.19	Lcorl	chr5	protein_coding	ligand dependent nuclear receptor corepressor-like
chr5	45885084	45893073	-	45859339	45893073	A3SS	0.33	50	50	ENSMUST00000045586.13	ENSMUSG00000015882.19	Lcorl	chr5	protein_coding	ligand dependent nuclear receptor corepressor-like
chr5	45891827	45893073	-	45859339	45893073	A3SS	0.33	50	50	ENSMUST00000045586.13	ENSMUSG00000015882.19	Lcorl	chr5	protein_coding	ligand dependent nuclear receptor corepressor-like
chr5	45931406	45932734	-	45904649	45932734	A3SS	0.5	50	50	ENSMUST00000045586.13	ENSMUSG00000015882.19	Lcorl	chr5	protein_coding	ligand dependent nuclear receptor corepressor-like
chr5	45932833	45933762	-	45932863	45933762	A3SS	0.5	50	50	ENSMUST00000045586.13	ENSMUSG00000015882.19	Lcorl	chr5	protein_coding	ligand dependent nuclear receptor corepressor-like
chr5	45859339	45880316	-	45859339	45893073	A5SS	0.33	50	50	ENSMUST00000045586.13	ENSMUSG00000015882.19	Lcorl	chr5	protein_coding	ligand dependent nuclear receptor corepressor-like
chr5	45952700	46013688	-	45952700	46014689	A5SS	0.33	50	50	ENSMUST00000045586.13	ENSMUSG00000015882.19	Lcorl	chr5	protein_coding	ligand dependent nuclear receptor corepressor-like
chr5	45952700	46014693	-	45952700	46014689	A5SS	0.33	50	50	ENSMUST00000045586.13	ENSMUSG00000015882.19	Lcorl	chr5	protein_coding	ligand dependent nuclear receptor corepressor-like
chr5	45859339	45893073	-	45859339;45885084	45880316;45893073	ES	0.33	50	50	ENSMUST00000238522.2	ENSMUSG00000015882.19	Lcorl	chr5	protein_coding	ligand dependent nuclear receptor corepressor-like
chr5	45891827	45893073	-	45885084	45893073	A3SS	0.33	50	50	ENSMUST00000238522.2	ENSMUSG00000015882.19	Lcorl	chr5	protein_coding	ligand dependent nuclear receptor corepressor-like
chr5	45859339	45880316	-	45859339	45904398	A5SS	0.33	50	50	ENSMUST00000190036.7	ENSMUSG00000015882.19	Lcorl	chr5	protein_coding	ligand dependent nuclear receptor corepressor-like
chr5	45952700	46014693	-	45952700	46013688	5pMXE	0.33	50	50	ENSMUST00000121573.8	ENSMUSG00000015882.19	Lcorl	chr5	protein_coding	ligand dependent nuclear receptor corepressor-like
chr5	45933841	46014689	-	45933841	45952635	A5SS&ES	0.5	50	50	ENSMUST00000187615.7	ENSMUSG00000015882.19	Lcorl	chr5	protein_coding	ligand dependent nuclear receptor corepressor-like
chr5	48327568;48333499	48333463;48339588	+	48327568	48339588	cassetteExon	0.5	100	100	ENSMUST00000173107.8	ENSMUSG00000031558.16	Slit2	chr5	protein_coding	slit guidance ligand 2
chr5	48346934;48348356	48348345;48349535	+	48346934	48349535	cassetteExon	0.5	100	100	ENSMUST00000173107.8	ENSMUSG00000031558.16	Slit2	chr5	protein_coding	slit guidance ligand 2
chr5	48377422;48378332	48378309;48381995	+	48377422	48381995	cassetteExon	0.5	100	100	ENSMUST00000173107.8	ENSMUSG00000031558.16	Slit2	chr5	protein_coding	slit guidance ligand 2
chr5	48407283;48407637	48407605;48414099	+	48407283	48414099	cassetteExon	0.5	100	100	ENSMUST00000173107.8	ENSMUSG00000031558.16	Slit2	chr5	protein_coding	slit guidance ligand 2
chr5	48417025;48421009	48420983;48432924	+	48417025	48432924	cassetteExon	0.5	100	100	ENSMUST00000173107.8	ENSMUSG00000031558.16	Slit2	chr5	protein_coding	slit guidance ligand 2
chr5	48157722	48240941	+	48157722	48327497	A3SS	0.5	50	50	ENSMUST00000173107.8	ENSMUSG00000031558.16	Slit2	chr5	protein_coding	slit guidance ligand 2
chr5	48327568	48330429	+	48327568	48339588	A3SS	0.33	50	50	ENSMUST00000173107.8	ENSMUSG00000031558.16	Slit2	chr5	protein_coding	slit guidance ligand 2
chr5	48382145	48386513	+	48382145	48387602	A3SS	0.5	50	50	ENSMUST00000173107.8	ENSMUSG00000031558.16	Slit2	chr5	protein_coding	slit guidance ligand 2
chr5	48404563	48407163	+	48404563	48407120	A3SS	0.5	50	50	ENSMUST00000173107.8	ENSMUSG00000031558.16	Slit2	chr5	protein_coding	slit guidance ligand 2
chr5	48417025	48419725	+	48417025	48432924	A3SS	0.33	50	50	ENSMUST00000173107.8	ENSMUSG00000031558.16	Slit2	chr5	protein_coding	slit guidance ligand 2
chr5	48326589	48327497	+	48157722	48327497	A5SS	0.5	50	50	ENSMUST00000173107.8	ENSMUSG00000031558.16	Slit2	chr5	protein_coding	slit guidance ligand 2
chr5	48380880	48381995	+	48377422	48381995	A5SS	0.33	50	50	ENSMUST00000173107.8	ENSMUSG00000031558.16	Slit2	chr5	protein_coding	slit guidance ligand 2
chr5	48440887	48453751	+	48440860	48453751	A5SS	0.5	50	50	ENSMUST00000173107.8	ENSMUSG00000031558.16	Slit2	chr5	protein_coding	slit guidance ligand 2
chr5	48417025	48419725	+	48417025	48420983	A3SS	0.33	50	50	ENSMUST00000174421.8	ENSMUSG00000031558.16	Slit2	chr5	protein_coding	slit guidance ligand 2
chr5	48380880	48381995	+	48378332	48381995	A5SS	0.33	50	50	ENSMUST00000174421.8	ENSMUSG00000031558.16	Slit2	chr5	protein_coding	slit guidance ligand 2
chr5	48327568	48333463	+	48327568	48330429	3pMXE	0.33	50	50	ENSMUST00000173926.8	ENSMUSG00000031558.16	Slit2	chr5	protein_coding	slit guidance ligand 2
chr5	48346934	48349535	+	48346934	48348345	3pMXE	0.5	50	50	ENSMUST00000174658.8	ENSMUSG00000031558.16	Slit2	chr5	protein_coding	slit guidance ligand 2
chr5	48532952	48536672	+	48532952;48534507	48534417;48536672	ES	0.5	50	50	ENSMUST00000196604.2	ENSMUSG00000029089.9	5730480H06Rik	chr5	protein_coding	RIKEN cDNA 5730480H06 gene
chr5	48531589	48531726	+	48531589	48531715	A3SS	0.5	50	50	ENSMUST00000196604.2	ENSMUSG00000029089.9	5730480H06Rik	chr5	protein_coding	RIKEN cDNA 5730480H06 gene
chr5	48529837	48531522	+	48485388	48531522	A5SS	0.5	50	50	ENSMUST00000196604.2	ENSMUSG00000029089.9	5730480H06Rik	chr5	protein_coding	RIKEN cDNA 5730480H06 gene
chr5	48539209	48552907	+	48539209	48545445	3pMXE	0.5	50	50	ENSMUST00000196950.5	ENSMUSG00000029089.9	5730480H06Rik	chr5	protein_coding	RIKEN cDNA 5730480H06 gene
chr5	48554043	48555114	+	48554043	48555057	A3SS	0.5	50	50	ENSMUST00000176521.6	ENSMUSG00000029089.9	5730480H06Rik	chr5	protein_coding	RIKEN cDNA 5730480H06 gene
chr5	48639997	48911654	-	48639997	48756765	5pMXE	0.12	50	50	ENSMUST00000166924.8	ENSMUSG00000029088.17	Kcnip4	chr5	protein_coding	Kv channel interacting protein 4
chr5	48639997	48911802	-	48639997	48756765	5pMXE	0.12	50	50	ENSMUST00000166924.8	ENSMUSG00000029088.17	Kcnip4	chr5	protein_coding	Kv channel interacting protein 4
chr5	48639997	49046708	-	48639997	48756765	5pMXE	0.12	50	50	ENSMUST00000166924.8	ENSMUSG00000029088.17	Kcnip4	chr5	protein_coding	Kv channel interacting protein 4
chr5	48639997	49442595	-	48639997	48756765	5pMXE	0.12	50	50	ENSMUST00000166924.8	ENSMUSG00000029088.17	Kcnip4	chr5	protein_coding	Kv channel interacting protein 4
chr5	48639997	49681983	-	48639997	48756765	5pMXE	0.12	50	50	ENSMUST00000166924.8	ENSMUSG00000029088.17	Kcnip4	chr5	protein_coding	Kv channel interacting protein 4
chr5	48639997	48649464	-	48639997	48756765	A5SS	0.12	50	50	ENSMUST00000166924.8	ENSMUSG00000029088.17	Kcnip4	chr5	protein_coding	Kv channel interacting protein 4
chr5	48639997	48667001	-	48639997	48756765	A5SS	0.12	50	50	ENSMUST00000166924.8	ENSMUSG00000029088.17	Kcnip4	chr5	protein_coding	Kv channel interacting protein 4
chr5	48639997	49046708	-	48639997	48911802	5pMXE	0.12	50	50	ENSMUST00000172363.9	ENSMUSG00000029088.17	Kcnip4	chr5	protein_coding	Kv channel interacting protein 4
chr5	48639997	49442595	-	48639997	48911802	5pMXE	0.12	50	50	ENSMUST00000172363.9	ENSMUSG00000029088.17	Kcnip4	chr5	protein_coding	Kv channel interacting protein 4
chr5	48639997	49681983	-	48639997	48911802	5pMXE	0.12	50	50	ENSMUST00000172363.9	ENSMUSG00000029088.17	Kcnip4	chr5	protein_coding	Kv channel interacting protein 4
chr5	48639997	48649464	-	48639997	48911802	A5SS	0.12	50	50	ENSMUST00000172363.9	ENSMUSG00000029088.17	Kcnip4	chr5	protein_coding	Kv channel interacting protein 4
chr5	48639997	48667001	-	48639997	48911802	A5SS	0.12	50	50	ENSMUST00000172363.9	ENSMUSG00000029088.17	Kcnip4	chr5	protein_coding	Kv channel interacting protein 4
chr5	48639997	48911654	-	48639997	48911802	A5SS	0.12	50	50	ENSMUST00000172363.9	ENSMUSG00000029088.17	Kcnip4	chr5	protein_coding	Kv channel interacting protein 4
chr5	48639997	49442595	-	48639997	49046708	5pMXE	0.12	50	50	ENSMUST00000176978.8	ENSMUSG00000029088.17	Kcnip4	chr5	protein_coding	Kv channel interacting protein 4
chr5	48639997	49681983	-	48639997	49046708	5pMXE	0.12	50	50	ENSMUST00000176978.8	ENSMUSG00000029088.17	Kcnip4	chr5	protein_coding	Kv channel interacting protein 4
chr5	48639997	48649464	-	48639997	49046708	A5SS	0.12	50	50	ENSMUST00000176978.8	ENSMUSG00000029088.17	Kcnip4	chr5	protein_coding	Kv channel interacting protein 4
chr5	48639997	48667001	-	48639997	49046708	A5SS	0.12	50	50	ENSMUST00000176978.8	ENSMUSG00000029088.17	Kcnip4	chr5	protein_coding	Kv channel interacting protein 4
chr5	48639997	48911654	-	48639997	49046708	A5SS	0.12	50	50	ENSMUST00000176978.8	ENSMUSG00000029088.17	Kcnip4	chr5	protein_coding	Kv channel interacting protein 4
chr5	48639997	49681983	-	48639997;48667102	48667001;49681983	ES	0.5	50	50	ENSMUST00000087395.11	ENSMUSG00000029088.17	Kcnip4	chr5	protein_coding	Kv channel interacting protein 4
chr5	48639997	48649464	-	48639997	48667001	A5SS	0.12	50	50	ENSMUST00000087395.11	ENSMUSG00000029088.17	Kcnip4	chr5	protein_coding	Kv channel interacting protein 4
chr5	48639997	48911654	-	48639997	48667001	A5SS&ES	0.12	50	50	ENSMUST00000087395.11	ENSMUSG00000029088.17	Kcnip4	chr5	protein_coding	Kv channel interacting protein 4
chr5	48639997	49442595	-	48639997	48667001	A5SS&ES	0.12	50	50	ENSMUST00000087395.11	ENSMUSG00000029088.17	Kcnip4	chr5	protein_coding	Kv channel interacting protein 4
chr5	48639997	48911654	-	48639997	48649464	5pMXE	0.12	50	50	ENSMUST00000101215.10	ENSMUSG00000029088.17	Kcnip4	chr5	protein_coding	Kv channel interacting protein 4
chr5	48639997	49442595	-	48639997	48649464	5pMXE	0.12	50	50	ENSMUST00000101215.10	ENSMUSG00000029088.17	Kcnip4	chr5	protein_coding	Kv channel interacting protein 4
chr5	48639997	49681983	-	48639997	48649464	5pMXE	0.12	50	50	ENSMUST00000101215.10	ENSMUSG00000029088.17	Kcnip4	chr5	protein_coding	Kv channel interacting protein 4
chr5	48639997	48911654	-	48639997	49681983	A5SS	0.12	50	50	ENSMUST00000176191.8	ENSMUSG00000029088.17	Kcnip4	chr5	protein_coding	Kv channel interacting protein 4
chr5	48639997	49442595	-	48639997	49681983	A5SS	0.12	50	50	ENSMUST00000176191.8	ENSMUSG00000029088.17	Kcnip4	chr5	protein_coding	Kv channel interacting protein 4
chr5	48639997	48911654	-	48639997	49442595	A5SS	0.12	50	50	ENSMUST00000175660.5	ENSMUSG00000029088.17	Kcnip4	chr5	protein_coding	Kv channel interacting protein 4
chr5	50123745	50128032	-	50121178	50128032	A3SS	0.5	50	50	ENSMUST00000030971.7	ENSMUSG00000029090.13	Adgra3	chr5	protein_coding	adhesion G protein-coupled receptor A3
chr5	50215685	50215894	-	50183120	50215894	A3SS	0.5	50	50	ENSMUST00000030971.7	ENSMUSG00000029090.13	Adgra3	chr5	protein_coding	adhesion G protein-coupled receptor A3
chr5	50156676	50158549	-	50156676	50159197	A5SS	0.5	50	50	ENSMUST00000030971.7	ENSMUSG00000029090.13	Adgra3	chr5	protein_coding	adhesion G protein-coupled receptor A3
chr5	51706033	51724972	-	51706033	51711077	5pMXE	0.5	50	50	ENSMUST00000132734.8	ENSMUSG00000029167.14	Ppargc1a	chr5	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
chr5	51647463	51647542	-	51647432	51647542	A3SS	0.5	50	50	ENSMUST00000132734.8	ENSMUSG00000029167.14	Ppargc1a	chr5	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
chr5	51620669	51629940	-	51615625	51629940	A3SS	0.5	50	50	ENSMUST00000196968.5	ENSMUSG00000029167.14	Ppargc1a	chr5	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
chr5	51615625	51620048	-	51615625	51629940	A5SS	0.5	50	50	ENSMUST00000196968.5	ENSMUSG00000029167.14	Ppargc1a	chr5	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
chr5	52314911	52317572	-	52314919	52317572	A3SS	0.5	50	50	ENSMUST00000031061.12	ENSMUSG00000029169.12	Dhx15	chr5	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 15
chr5	52342245	52347622	-	52328925	52347622	A3SS	0.5	50	50	ENSMUST00000195922.2	ENSMUSG00000029169.12	Dhx15	chr5	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 15
chr5	52328925	52338324	-	52328925	52347622	A5SS	0.5	50	50	ENSMUST00000195922.2	ENSMUSG00000029169.12	Dhx15	chr5	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 15
chr5	52350320	52352143	+	52350320	52351740	3pMXE	0.5	50	50	ENSMUST00000199547.5	ENSMUSG00000097145.6	9230114K14Rik	chr5	lncRNA	RIKEN cDNA 9230114K14 gene
chr5	52350320	52352143	+	52350938	52352143	A5SS	0.5	50	50	ENSMUST00000180601.6	ENSMUSG00000097145.6	9230114K14Rik	chr5	lncRNA	RIKEN cDNA 9230114K14 gene
chr5	52348279	52350260	+	52348279	52354235	A3SS	0.5	50	50	ENSMUST00000199805.5	ENSMUSG00000097145.6	9230114K14Rik	chr5	lncRNA	RIKEN cDNA 9230114K14 gene
chr5	52369494	52403019	+	52369494	52436182	A3SS	0.5	50	50	ENSMUST00000199805.5	ENSMUSG00000097145.6	9230114K14Rik	chr5	lncRNA	RIKEN cDNA 9230114K14 gene
chr5	52352232	52354235	+	52348279	52354235	A5SS	0.5	50	50	ENSMUST00000199805.5	ENSMUSG00000097145.6	9230114K14Rik	chr5	lncRNA	RIKEN cDNA 9230114K14 gene
chr5	52563434	52578074	-	52534020	52578074	A3SS	0.5	50	50	ENSMUST00000198008.5	ENSMUSG00000045790.11	Ccdc149	chr5	protein_coding	coiled-coil domain containing 149
chr5	52534020	52542447	-	52534020	52578074	A5SS	0.5	50	50	ENSMUST00000198008.5	ENSMUSG00000045790.11	Ccdc149	chr5	protein_coding	coiled-coil domain containing 149
chr5	52542563;52548463	52548431;52550013	-	52542563	52550013	cassetteExon	0.5	100	100	ENSMUST00000059428.7	ENSMUSG00000045790.11	Ccdc149	chr5	protein_coding	coiled-coil domain containing 149
chr5	52711914	52717505	-	52711914;52713075	52713004;52717505	ES	0.5	50	50	ENSMUST00000199942.5	ENSMUSG00000039252.12	Lgi2	chr5	protein_coding	leucine-rich repeat LGI family, member 2
chr5	52704055	52711745	-	52703959	52711745	A3SS	0.5	50	50	ENSMUST00000199942.5	ENSMUSG00000039252.12	Lgi2	chr5	protein_coding	leucine-rich repeat LGI family, member 2
chr5	52813697	52821510	-	52813697;52818074	52817972;52821510	ES	0.5	50	50	ENSMUST00000031069.13	ENSMUSG00000029173.13	Sepsecs	chr5	protein_coding	Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase
chr5	52821663	52822504	-	52821663	52822578	A5SS	0.5	50	50	ENSMUST00000031069.13	ENSMUSG00000029173.13	Sepsecs	chr5	protein_coding	Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase
chr5	52823448	52826308	-	52823448	52826241	A5SS	0.5	50	50	ENSMUST00000031069.13	ENSMUSG00000029173.13	Sepsecs	chr5	protein_coding	Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase
chr5	52899310	52907950	+	52899310;52905847	52905711;52907950	ES	0.33	50	50	ENSMUST00000031081.11	ENSMUSG00000029186.13	Pi4k2b	chr5	protein_coding	phosphatidylinositol 4-kinase type 2 beta
chr5	52899310;52900901	52900834;52907950	+	52899310;52905847	52905711;52907950	MXE	0.5	100	100	ENSMUST00000031081.11	ENSMUSG00000029186.13	Pi4k2b	chr5	protein_coding	phosphatidylinositol 4-kinase type 2 beta
chr5	52899310;52900901	52900834;52907950	+	52899310	52907950	cassetteExon	0.5	100	100	ENSMUST00000131526.2	ENSMUSG00000029186.13	Pi4k2b	chr5	protein_coding	phosphatidylinositol 4-kinase type 2 beta
chr5	52965702;52971655	52971167;52973143	+	52965702	52973143	cassetteExon	0.5	100	100	ENSMUST00000113901.8	ENSMUSG00000029179.15	Zcchc4	chr5	protein_coding	zinc finger, CCHC domain containing 4
chr5	52942522	52953396	+	52942522	52953319	A3SS	0.5	50	50	ENSMUST00000113901.8	ENSMUSG00000029179.15	Zcchc4	chr5	protein_coding	zinc finger, CCHC domain containing 4
chr5	52941449	52942440	+	52932936	52942440	A5SS	0.5	50	50	ENSMUST00000113901.8	ENSMUSG00000029179.15	Zcchc4	chr5	protein_coding	zinc finger, CCHC domain containing 4
chr5	52942528	52953319	+	52942522	52953319	A5SS	0.5	50	50	ENSMUST00000113901.8	ENSMUSG00000029179.15	Zcchc4	chr5	protein_coding	zinc finger, CCHC domain containing 4
chr5	52955487	52961721	+	52954001	52961721	A5SS	0.5	50	50	ENSMUST00000113901.8	ENSMUSG00000029179.15	Zcchc4	chr5	protein_coding	zinc finger, CCHC domain containing 4
chr5	53002749	53005333	+	53002749;53004060	53003974;53005333	ES	0.5	50	50	ENSMUST00000031072.14	ENSMUSG00000029176.14	Anapc4	chr5	protein_coding	anaphase promoting complex subunit 4
chr5	52993125;52993305	52993233;52996964	+	52993125	52996964	cassetteExon	0.5	100	100	ENSMUST00000031072.14	ENSMUSG00000029176.14	Anapc4	chr5	protein_coding	anaphase promoting complex subunit 4
chr5	53005397	53007800	+	53005397	53005936	3pMXE	0.5	50	50	ENSMUST00000130536.5	ENSMUSG00000029176.14	Anapc4	chr5	protein_coding	anaphase promoting complex subunit 4
chr5	53005397;53006173	53005936;53007800	+	53005397	53007800	cassetteExon	0.5	100	100	ENSMUST00000150682.3	ENSMUSG00000029176.14	Anapc4	chr5	protein_coding	anaphase promoting complex subunit 4
chr5	53148079	53149556	-	53148079	53151423	A5SS	0.5	50	50	ENSMUST00000198248.5	ENSMUSG00000106352.5	5033403H07Rik	chr5	lncRNA	RIKEN cDNA 5033403H07 gene
chr5	53206738	53215495	+	53195576	53215495	A5SS	0.5	50	50	ENSMUST00000170523.8	ENSMUSG00000029188.15	Slc34a2	chr5	protein_coding	solute carrier family 34 (sodium phosphate), member 2
chr5	53330048	53330235	-	53330048	53332079	A5SS	0.5	50	50	ENSMUST00000031090.8	ENSMUSG00000029189.11	Sel1l3	chr5	protein_coding	sel-1 suppressor of lin-12-like 3 (C. elegans)
chr5	53357813	53357993	-	53357813	53370472	A5SS	0.5	50	50	ENSMUST00000031090.8	ENSMUSG00000029189.11	Sel1l3	chr5	protein_coding	sel-1 suppressor of lin-12-like 3 (C. elegans)
chr5	53424700	53434485	+	53424700	53425365	3pMXE	0.5	50	50	ENSMUST00000203623.2	ENSMUSG00000061461.12	Smim20	chr5	protein_coding	small integral membrane protein 20
chr5	53424700;53425412	53425365;53434485	+	53424700	53434485	cassetteExon	0.5	100	100	ENSMUST00000147148.5	ENSMUSG00000061461.12	Smim20	chr5	protein_coding	small integral membrane protein 20
chr5	53424700;53425673	53425365;53434485	+	53424700	53434485	cassetteExon	0.5	100	100	ENSMUST00000147148.5	ENSMUSG00000061461.12	Smim20	chr5	protein_coding	small integral membrane protein 20
chr5	53425412	53434485	+	53425673	53434485	A5SS	0.33	50	50	ENSMUST00000204218.3	ENSMUSG00000061461.12	Smim20	chr5	protein_coding	small integral membrane protein 20
chr5	53713245	53784725	+	53723555	53784725	A5SS&ES	0.11	50	50	ENSMUST00000201991.4	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53747828	53784725	+	53723555	53784725	A5SS	0.11	50	50	ENSMUST00000201991.4	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53748066	53784725	+	53723555	53784725	A5SS	0.11	50	50	ENSMUST00000201991.4	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53749322	53784725	+	53723555	53784725	A5SS	0.11	50	50	ENSMUST00000201991.4	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53758304	53784725	+	53723555	53784725	A5SS	0.11	50	50	ENSMUST00000201991.4	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53776914	53784725	+	53723555	53784725	A5SS	0.11	50	50	ENSMUST00000201991.4	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53782577	53784725	+	53723555	53784725	A5SS	0.11	50	50	ENSMUST00000201991.4	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53782757	53784725	+	53723555	53784725	A5SS	0.11	50	50	ENSMUST00000201991.4	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53747828	53784725	+	53713245	53784725	A5SS	0.11	50	50	ENSMUST00000087360.9	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53748066	53784725	+	53713245	53784725	A5SS	0.11	50	50	ENSMUST00000087360.9	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53749322	53784725	+	53713245	53784725	A5SS	0.11	50	50	ENSMUST00000087360.9	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53758304	53784725	+	53713245	53784725	A5SS	0.11	50	50	ENSMUST00000087360.9	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53776914	53784725	+	53713245	53784725	A5SS	0.11	50	50	ENSMUST00000087360.9	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53782577	53784725	+	53713245	53784725	A5SS	0.11	50	50	ENSMUST00000087360.9	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53782757	53784725	+	53713245	53784725	A5SS	0.11	50	50	ENSMUST00000087360.9	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53747828;53758304	53758043;53784725	+	53747828	53784725	cassetteExon	0.5	100	100	ENSMUST00000037618.13	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53748066	53784725	+	53747828	53784725	A5SS	0.11	50	50	ENSMUST00000037618.13	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53749322	53784725	+	53747828	53784725	A5SS	0.11	50	50	ENSMUST00000037618.13	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53776914	53784725	+	53747828	53784725	A5SS	0.11	50	50	ENSMUST00000037618.13	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53782577	53784725	+	53747828	53784725	A5SS	0.11	50	50	ENSMUST00000037618.13	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53782757	53784725	+	53747828	53784725	A5SS	0.11	50	50	ENSMUST00000037618.13	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53748066	53784725	+	53758304	53784725	A5SS&ES	0.14	50	50	ENSMUST00000201912.4	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53749322	53784725	+	53758304	53784725	A5SS&ES	0.14	50	50	ENSMUST00000201912.4	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53776914	53784725	+	53758304	53784725	A5SS	0.14	50	50	ENSMUST00000201912.4	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53782577	53784725	+	53758304	53784725	A5SS	0.14	50	50	ENSMUST00000201912.4	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53782757	53784725	+	53758304	53784725	A5SS	0.14	50	50	ENSMUST00000201912.4	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53749322	53784725	+	53748066	53784725	A5SS	0.11	50	50	ENSMUST00000113865.5	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53776914	53784725	+	53748066	53784725	A5SS	0.11	50	50	ENSMUST00000113865.5	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53782577	53784725	+	53748066	53784725	A5SS	0.11	50	50	ENSMUST00000113865.5	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53782757	53784725	+	53748066	53784725	A5SS	0.11	50	50	ENSMUST00000113865.5	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53776914	53784725	+	53749322	53784725	A5SS	0.11	50	50	ENSMUST00000201883.4	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53782577	53784725	+	53749322	53784725	A5SS	0.11	50	50	ENSMUST00000201883.4	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53782757	53784725	+	53749322	53784725	A5SS	0.11	50	50	ENSMUST00000201883.4	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53782577	53784725	+	53776914	53784725	A5SS	0.11	50	50	ENSMUST00000201928.4	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53782757	53784725	+	53776914	53784725	A5SS	0.11	50	50	ENSMUST00000201928.4	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53782757	53784725	+	53782577	53784725	A5SS	0.11	50	50	ENSMUST00000200856.4	ENSMUSG00000039191.13	Rbpj	chr5	protein_coding	recombination signal binding protein for immunoglobulin kappa J region
chr5	53863847	53864588	-	53863847	53864545	A5SS	0.5	50	50	ENSMUST00000200691.4	ENSMUSG00000029193.8	Cckar	chr5	protein_coding	cholecystokinin A receptor
chr5	53863795	53864588	-	53863847	53864588	A3SS	0.5	50	50	ENSMUST00000031093.5	ENSMUSG00000029193.8	Cckar	chr5	protein_coding	cholecystokinin A receptor
chr5	53990387	53993938	+	53990387;53992588	53992514;53993938	ES	0.5	50	50	ENSMUST00000202528.4	ENSMUSG00000039178.10	Tbc1d19	chr5	protein_coding	TBC1 domain family, member 19
chr5	53995312	53995519	+	53995312	53995469	A3SS	0.5	50	50	ENSMUST00000202528.4	ENSMUSG00000039178.10	Tbc1d19	chr5	protein_coding	TBC1 domain family, member 19
chr5	53987840	53990312	+	53987897	53990312	A5SS	0.25	50	50	ENSMUST00000202528.4	ENSMUSG00000039178.10	Tbc1d19	chr5	protein_coding	TBC1 domain family, member 19
chr5	53987842	53990312	+	53987897	53990312	A5SS	0.25	50	50	ENSMUST00000202528.4	ENSMUSG00000039178.10	Tbc1d19	chr5	protein_coding	TBC1 domain family, member 19
chr5	53988830	53990312	+	53987897	53990312	A5SS	0.25	50	50	ENSMUST00000202528.4	ENSMUSG00000039178.10	Tbc1d19	chr5	protein_coding	TBC1 domain family, member 19
chr5	53987842;53988830	53988709;53990312	+	53987842	53990312	cassetteExon	0.5	100	100	ENSMUST00000037337.10	ENSMUSG00000039178.10	Tbc1d19	chr5	protein_coding	TBC1 domain family, member 19
chr5	53987840	53990312	+	53987842	53990312	A5SS	0.25	50	50	ENSMUST00000037337.10	ENSMUSG00000039178.10	Tbc1d19	chr5	protein_coding	TBC1 domain family, member 19
chr5	54048504	54054333	+	54046749	54054333	A5SS	0.5	50	50	ENSMUST00000037337.10	ENSMUSG00000039178.10	Tbc1d19	chr5	protein_coding	TBC1 domain family, member 19
chr5	53988830	53990312	+	53987840	53990312	A5SS	0.25	50	50	ENSMUST00000201958.4	ENSMUSG00000039178.10	Tbc1d19	chr5	protein_coding	TBC1 domain family, member 19
chr5	54267212;54267481	54267458;54267879	+	54267212	54267879	cassetteExon	0.5	100	100	ENSMUST00000117661.9	ENSMUSG00000039156.20	Stim2	chr5	protein_coding	stromal interaction molecule 2
chr5	54267979	54268352	+	54267979	54268214	A3SS	0.5	50	50	ENSMUST00000117661.9	ENSMUSG00000039156.20	Stim2	chr5	protein_coding	stromal interaction molecule 2
chr5	54232191	54232622	+	54210848	54232622	A5SS	0.5	50	50	ENSMUST00000117661.9	ENSMUSG00000039156.20	Stim2	chr5	protein_coding	stromal interaction molecule 2
chr5	57879620;58028704	58028639;58070498	+	57879620	58070498	cassetteExon	0.5	100	100	ENSMUST00000191837.6	ENSMUSG00000029108.15	Pcdh7	chr5	protein_coding	protocadherin 7
chr5	58070714;58099604	58099509;58286317	+	58070714	58286317	cassetteExon	0.5	100	100	ENSMUST00000191837.6	ENSMUSG00000029108.15	Pcdh7	chr5	protein_coding	protocadherin 7
chr5	57879620	57885456	+	57879620	58070498	A3SS	0.33	50	50	ENSMUST00000191837.6	ENSMUSG00000029108.15	Pcdh7	chr5	protein_coding	protocadherin 7
chr5	58070714	58073146	+	58070714	58286317	A3SS	0.33	50	50	ENSMUST00000191837.6	ENSMUSG00000029108.15	Pcdh7	chr5	protein_coding	protocadherin 7
chr5	58070690	58286317	+	58070714	58286317	A5SS	0.33	50	50	ENSMUST00000191837.6	ENSMUSG00000029108.15	Pcdh7	chr5	protein_coding	protocadherin 7
chr5	57879620	58028639	+	57879620	57885456	3pMXE	0.33	50	50	ENSMUST00000068110.10	ENSMUSG00000029108.15	Pcdh7	chr5	protein_coding	protocadherin 7
chr5	58099604	58286317	+	58070690	58286317	A5SS	0.33	50	50	ENSMUST00000094783.7	ENSMUSG00000029108.15	Pcdh7	chr5	protein_coding	protocadherin 7
chr5	58070714	58099509	+	58070714	58073146	3pMXE	0.33	50	50	ENSMUST00000192287.6	ENSMUSG00000029108.15	Pcdh7	chr5	protein_coding	protocadherin 7
chr5	60134173	60142623	-	60130688	60142623	A3SS	0.5	50	50	ENSMUST00000197579.5	ENSMUSG00000106013.5	4933402J10Rik	chr5	lncRNA	RIKEN cDNA 4933402J10 gene
chr5	60130688	60131796	-	60130688	60142623	A5SS	0.5	50	50	ENSMUST00000197579.5	ENSMUSG00000106013.5	4933402J10Rik	chr5	lncRNA	RIKEN cDNA 4933402J10 gene
chr5	62761999;62763552	62763418;62769047	-	62761999	62769047	cassetteExon	0.5	100	100	ENSMUST00000160620.3	ENSMUSG00000037999.14	Arap2	chr5	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
chr5	62864071	62887864	-	62864071;62872145	62872076;62887864	ES	0.5	50	50	ENSMUST00000076623.8	ENSMUSG00000037999.14	Arap2	chr5	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
chr5	62907159	62922863	-	62907159	62923237	A5SS	0.5	50	50	ENSMUST00000076623.8	ENSMUSG00000037999.14	Arap2	chr5	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
chr5	63807663;63808626	63808502;63882501	+	63807663	63882501	cassetteExon	0.5	100	100	ENSMUST00000160066.8	ENSMUSG00000090061.10	Nwd2	chr5	protein_coding	NACHT and WD repeat domain containing 2
chr5	63957967	63966823	+	63957967	63961714	A3SS	0.5	50	50	ENSMUST00000159584.3	ENSMUSG00000090061.10	Nwd2	chr5	protein_coding	NACHT and WD repeat domain containing 2
chr5	64033842;64045529	64045388;64053773	+	64033842	64053773	cassetteExon	0.5	100	100	ENSMUST00000081747.8	ENSMUSG00000060512.8	0610040J01Rik	chr5	protein_coding	RIKEN cDNA 0610040J01 gene
chr5	64034930	64053773	+	64033842	64053773	A5SS	0.33	50	50	ENSMUST00000081747.8	ENSMUSG00000060512.8	0610040J01Rik	chr5	protein_coding	RIKEN cDNA 0610040J01 gene
chr5	64034930	64053773	+	64045529	64053773	A5SS&ES	0.33	50	50	ENSMUST00000196575.5	ENSMUSG00000060512.8	0610040J01Rik	chr5	protein_coding	RIKEN cDNA 0610040J01 gene
chr5	64082216;64083363	64083302;64084332	-	64082216	64084332	cassetteExon	0.5	100	100	ENSMUST00000154169.4	ENSMUSG00000047881.15	Rell1	chr5	protein_coding	RELT-like 1
chr5	64095376;64097105	64097012;64125989	-	64095376	64125989	cassetteExon	0.5	100	100	ENSMUST00000154169.4	ENSMUSG00000047881.15	Rell1	chr5	protein_coding	RELT-like 1
chr5	64117997	64125989	-	64095376	64125989	A3SS	0.33	50	50	ENSMUST00000154169.4	ENSMUSG00000047881.15	Rell1	chr5	protein_coding	RELT-like 1
chr5	64087878	64088222	-	64087878	64093366	A5SS	0.5	50	50	ENSMUST00000154169.4	ENSMUSG00000047881.15	Rell1	chr5	protein_coding	RELT-like 1
chr5	64117997	64125989	-	64097105	64125989	A3SS	0.33	50	50	ENSMUST00000087327.13	ENSMUSG00000047881.15	Rell1	chr5	protein_coding	RELT-like 1
chr5	64269540	64285120	+	64269540;64273776	64273643;64285120	ES	0.5	50	50	ENSMUST00000087324.7	ENSMUSG00000029171.13	Pgm2	chr5	protein_coding	phosphoglucomutase 2
chr5	64261207	64263098	+	64261250	64263098	A5SS	0.5	50	50	ENSMUST00000087324.7	ENSMUSG00000029171.13	Pgm2	chr5	protein_coding	phosphoglucomutase 2
chr5	64317198	64317603	+	64314012	64317603	A5SS	0.5	50	50	ENSMUST00000199270.5	ENSMUSG00000029174.19	Tbc1d1	chr5	protein_coding	TBC1 domain family, member 1
chr5	64387873	64414058	+	64331239	64414058	A5SS	0.5	50	50	ENSMUST00000043893.13	ENSMUSG00000029174.19	Tbc1d1	chr5	protein_coding	TBC1 domain family, member 1
chr5	64436746	64439108	+	64436760	64439108	A5SS	0.5	50	50	ENSMUST00000043893.13	ENSMUSG00000029174.19	Tbc1d1	chr5	protein_coding	TBC1 domain family, member 1
chr5	64455947	64468402	+	64443427	64468402	A5SS	0.5	50	50	ENSMUST00000043893.13	ENSMUSG00000029174.19	Tbc1d1	chr5	protein_coding	TBC1 domain family, member 1
chr5	64439388	64441310	+	64439388	64443288	A3SS	0.5	50	50	ENSMUST00000121370.8	ENSMUSG00000029174.19	Tbc1d1	chr5	protein_coding	TBC1 domain family, member 1
chr5	64442152	64443288	+	64439388	64443288	A5SS	0.5	50	50	ENSMUST00000121370.8	ENSMUSG00000029174.19	Tbc1d1	chr5	protein_coding	TBC1 domain family, member 1
chr5	64634575	64635778	+	64634575	64640919	A3SS	0.5	50	50	ENSMUST00000200615.2	ENSMUSG00000105352.5	C030018K13Rik	chr5	lncRNA	RIKEN cDNA C030018K13 gene
chr5	64753666;64756755	64756642;64759325	-	64753666	64759325	cassetteExon	0.5	100	100	ENSMUST00000198582.5	ENSMUSG00000105402.5	Gm3716	chr5	lncRNA	predicted gene 3716
chr5	64759492	64760361	-	64759492	64767443	A5SS	0.5	50	50	ENSMUST00000198582.5	ENSMUSG00000105402.5	Gm3716	chr5	lncRNA	predicted gene 3716
chr5	64865848	64871510	-	64865848;64867246	64867046;64871510	ES	0.5	50	50	ENSMUST00000180912.6	ENSMUSG00000097640.8	Gm20033	chr5	lncRNA	predicted gene, 20033
chr5	64865848	64871510	-	64867246	64871510	3pMXE	0.5	50	50	ENSMUST00000180799.3	ENSMUSG00000097640.8	Gm20033	chr5	lncRNA	predicted gene, 20033
chr5	64974173;64976050	64975968;64979217	+	64974173	64979217	cassetteExon	0.5	100	100	ENSMUST00000165536.8	ENSMUSG00000029178.15	Klf3	chr5	protein_coding	Kruppel-like factor 3 (basic)
chr5	64980372;64984225	64984147;64984453	+	64980372	64984453	cassetteExon	0.5	100	100	ENSMUST00000165536.8	ENSMUSG00000029178.15	Klf3	chr5	protein_coding	Kruppel-like factor 3 (basic)
chr5	64969846	64974078	+	64961134	64974078	A5SS	0.33	50	50	ENSMUST00000165536.8	ENSMUSG00000029178.15	Klf3	chr5	protein_coding	Kruppel-like factor 3 (basic)
chr5	64969850	64974078	+	64961134	64974078	A5SS	0.33	50	50	ENSMUST00000165536.8	ENSMUSG00000029178.15	Klf3	chr5	protein_coding	Kruppel-like factor 3 (basic)
chr5	64969846	64974079	+	64969846	64974078	A3SS	0.5	50	50	ENSMUST00000197869.2	ENSMUSG00000029178.15	Klf3	chr5	protein_coding	Kruppel-like factor 3 (basic)
chr5	64969850	64974078	+	64969846	64974078	A5SS	0.33	50	50	ENSMUST00000197869.2	ENSMUSG00000029178.15	Klf3	chr5	protein_coding	Kruppel-like factor 3 (basic)
chr5	64980372	64984453	+	64984225	64984453	5pMXE	0.5	50	50	ENSMUST00000198946.2	ENSMUSG00000029178.15	Klf3	chr5	protein_coding	Kruppel-like factor 3 (basic)
chr5	65090667	65090869	-	65090443	65090869	A3SS	0.5	50	50	ENSMUST00000197315.5	ENSMUSG00000044827.11	Tlr1	chr5	protein_coding	toll-like receptor 1
chr5	65087566	65090010	-	65087566	65090144	A5SS	0.5	50	50	ENSMUST00000197315.5	ENSMUSG00000044827.11	Tlr1	chr5	protein_coding	toll-like receptor 1
chr5	65112936	65117366	-	65112936	65117277	A5SS	0.5	50	50	ENSMUST00000062315.7	ENSMUSG00000051498.8	Tlr6	chr5	protein_coding	toll-like receptor 6
chr5	65129805	65137051	+	65127487	65137051	A5SS	0.5	50	50	ENSMUST00000031080.15	ENSMUSG00000029185.15	Fam114a1	chr5	protein_coding	family with sequence similarity 114, member A1
chr5	65237534;65248768	65248702;65248909	-	65237534	65248909	cassetteExon	0.5	100	100	ENSMUST00000203664.2	ENSMUSG00000037913.13	Tmem156	chr5	protein_coding	transmembrane protein 156
chr5	65220591	65229585	-	65215713	65229585	A3SS	0.33	50	50	ENSMUST00000203664.2	ENSMUSG00000037913.13	Tmem156	chr5	protein_coding	transmembrane protein 156
chr5	65222533	65229585	-	65215713	65229585	A3SS	0.33	50	50	ENSMUST00000203664.2	ENSMUSG00000037913.13	Tmem156	chr5	protein_coding	transmembrane protein 156
chr5	65233079	65237265	-	65233166	65237265	A3SS	0.5	50	50	ENSMUST00000203664.2	ENSMUSG00000037913.13	Tmem156	chr5	protein_coding	transmembrane protein 156
chr5	65237534	65248811	-	65237534	65248909	A5SS	0.33	50	50	ENSMUST00000203664.2	ENSMUSG00000037913.13	Tmem156	chr5	protein_coding	transmembrane protein 156
chr5	65222533	65229585	-	65220591	65229585	A3SS	0.33	50	50	ENSMUST00000043352.8	ENSMUSG00000037913.13	Tmem156	chr5	protein_coding	transmembrane protein 156
chr5	65237534	65248702	-	65237534	65248811	A5SS	0.33	50	50	ENSMUST00000043352.8	ENSMUSG00000037913.13	Tmem156	chr5	protein_coding	transmembrane protein 156
chr5	65237534	65248702	-	65237429	65248702	A3SS	0.5	50	50	ENSMUST00000212640.2	ENSMUSG00000037913.13	Tmem156	chr5	protein_coding	transmembrane protein 156
chr5	65237534	65248909	-	65248768	65248909	A3SS&ES	0.5	50	50	ENSMUST00000212640.2	ENSMUSG00000037913.13	Tmem156	chr5	protein_coding	transmembrane protein 156
chr5	65306144	65309979	+	65306144	65313398	A3SS	0.5	50	50	ENSMUST00000204097.3	ENSMUSG00000054920.13	Klhl5	chr5	protein_coding	kelch-like 5
chr5	65289119	65298603	+	65265204	65298603	A5SS	0.5	50	50	ENSMUST00000204097.3	ENSMUSG00000054920.13	Klhl5	chr5	protein_coding	kelch-like 5
chr5	65289119	65300582	+	65298785	65300582	A5SS&ES	0.5	50	50	ENSMUST00000204097.3	ENSMUSG00000054920.13	Klhl5	chr5	protein_coding	kelch-like 5
chr5	65320424	65321874	+	65320345	65321874	A5SS	0.5	50	50	ENSMUST00000204097.3	ENSMUSG00000054920.13	Klhl5	chr5	protein_coding	kelch-like 5
chr5	65289119	65300582	+	65289119;65298785	65298603;65300582	ES	0.5	50	50	ENSMUST00000101191.10	ENSMUSG00000054920.13	Klhl5	chr5	protein_coding	kelch-like 5
chr5	65289119	65291656	+	65289119	65298603	A3SS	0.33	50	50	ENSMUST00000101191.10	ENSMUSG00000054920.13	Klhl5	chr5	protein_coding	kelch-like 5
chr5	65289119	65291656	+	65289119	65300582	A3SS	0.33	50	50	ENSMUST00000204348.3	ENSMUSG00000054920.13	Klhl5	chr5	protein_coding	kelch-like 5
chr5	65415571	65417461	+	65415571	65417457	A3SS	0.5	50	50	ENSMUST00000041892.13	ENSMUSG00000037890.14	Wdr19	chr5	protein_coding	WD repeat domain 19
chr5	65420489	65421586	-	65420492	65421586	A3SS	0.5	50	50	ENSMUST00000203581.3	ENSMUSG00000029191.17	Rfc1	chr5	protein_coding	replication factor C (activator 1) 1
chr5	65436166	65436800	-	65436163	65436800	A3SS	0.5	50	50	ENSMUST00000203581.3	ENSMUSG00000029191.17	Rfc1	chr5	protein_coding	replication factor C (activator 1) 1
chr5	65459353	65460319	-	65459395	65460319	A3SS	0.5	50	50	ENSMUST00000203581.3	ENSMUSG00000029191.17	Rfc1	chr5	protein_coding	replication factor C (activator 1) 1
chr5	65529553	65533023	+	65529803	65533023	A5SS	0.5	50	50	ENSMUST00000031096.11	ENSMUSG00000029195.11	Klb	chr5	protein_coding	klotho beta
chr5	65545810	65545905	-	65545784	65545905	A3SS	0.5	50	50	ENSMUST00000151917.6	ENSMUSG00000047215.15	Rpl9	chr5	protein_coding	ribosomal protein L9
chr5	65546953	65547731	-	65546022	65547731	A3SS	0.5	50	50	ENSMUST00000150815.6	ENSMUSG00000047215.15	Rpl9	chr5	protein_coding	ribosomal protein L9
chr5	65546022	65546414	-	65546022	65547731	A5SS	0.5	50	50	ENSMUST00000150815.6	ENSMUSG00000047215.15	Rpl9	chr5	protein_coding	ribosomal protein L9
chr5	65548197	65548285	-	65548197	65548289	A5SS	0.5	50	50	ENSMUST00000118543.8	ENSMUSG00000047215.15	Rpl9	chr5	protein_coding	ribosomal protein L9
chr5	65549016	65549678	+	65549016	65549563	A3SS	0.5	50	50	ENSMUST00000122026.6	ENSMUSG00000029199.12	Lias	chr5	protein_coding	lipoic acid synthetase
chr5	65549016;65549586	65549563;65549678	+	65549016	65549678	cassetteExon	0.5	100	100	ENSMUST00000031101.10	ENSMUSG00000029199.12	Lias	chr5	protein_coding	lipoic acid synthetase
chr5	65584927	65625736	-	65584927	65592967	5pMXE	0.33	50	50	ENSMUST00000031103.14	ENSMUSG00000029201.15	Ugdh	chr5	protein_coding	UDP-glucose dehydrogenase
chr5	65584927	65585657	-	65584927	65592967	A5SS	0.33	50	50	ENSMUST00000031103.14	ENSMUSG00000029201.15	Ugdh	chr5	protein_coding	UDP-glucose dehydrogenase
chr5	65584927	65625736	-	65584927	65585657	5pMXE	0.33	50	50	ENSMUST00000131263.3	ENSMUSG00000029201.15	Ugdh	chr5	protein_coding	UDP-glucose dehydrogenase
chr5	65625844	65650284	-	65625844	65650079	5pMXE	0.33	50	50	ENSMUST00000196121.2	ENSMUSG00000105835.2	Gm43552	chr5	protein_coding	predicted gene 43552
chr5	65625844	65694132	-	65625844	65650079	5pMXE	0.33	50	50	ENSMUST00000196121.2	ENSMUSG00000105835.2	Gm43552	chr5	protein_coding	predicted gene 43552
chr5	65617915	65625736	-	65584927	65625736	A3SS	0.5	50	50	ENSMUST00000196121.2	ENSMUSG00000105835.2	Gm43552	chr5	protein_coding	predicted gene 43552
chr5	65607780;65608160	65608055;65610529	-	65607780	65610529	cassetteExon	0.5	100	100	ENSMUST00000139122.8	ENSMUSG00000037822.13	Smim14	chr5	protein_coding	small integral membrane protein 14
chr5	65625844	65694132	-	65625844	65650284	5pMXE	0.33	50	50	ENSMUST00000121661.8	ENSMUSG00000037822.13	Smim14	chr5	protein_coding	small integral membrane protein 14
chr5	65694889	65728875	+	65694889;65723425	65723332;65728875	ES	0.5	50	50	ENSMUST00000142407.8	ENSMUSG00000029203.17	Ube2k	chr5	protein_coding	ubiquitin-conjugating enzyme E2K
chr5	65723425	65738729	+	65723425;65728933	65728875;65738729	ES	0.25	50	50	ENSMUST00000142407.8	ENSMUSG00000029203.17	Ube2k	chr5	protein_coding	ubiquitin-conjugating enzyme E2K
chr5	65728933	65749219	+	65728933;65738811	65738729;65749219	ES	0.5	50	50	ENSMUST00000142407.8	ENSMUSG00000029203.17	Ube2k	chr5	protein_coding	ubiquitin-conjugating enzyme E2K
chr5	65749318	65752218	+	65749318;65751891	65751763;65752218	ES	0.5	50	50	ENSMUST00000142407.8	ENSMUSG00000029203.17	Ube2k	chr5	protein_coding	ubiquitin-conjugating enzyme E2K
chr5	65694801	65723332	+	65694889	65723332	A5SS	0.5	50	50	ENSMUST00000142407.8	ENSMUSG00000029203.17	Ube2k	chr5	protein_coding	ubiquitin-conjugating enzyme E2K
chr5	65694801	65738729	+	65728933	65738729	A5SS&ES	0.25	50	50	ENSMUST00000142407.8	ENSMUSG00000029203.17	Ube2k	chr5	protein_coding	ubiquitin-conjugating enzyme E2K
chr5	65728933;65749318	65749219;65751763	+	65728933	65751763	cassetteExon	0.5	100	100	ENSMUST00000201266.4	ENSMUSG00000029203.17	Ube2k	chr5	protein_coding	ubiquitin-conjugating enzyme E2K
chr5	65728933;65749318	65749219;65752218	+	65728933;65751891	65751763;65752218	MXE	0.5	100	100	ENSMUST00000201266.4	ENSMUSG00000029203.17	Ube2k	chr5	protein_coding	ubiquitin-conjugating enzyme E2K
chr5	65694889	65738729	+	65694889	65723332	A3SS&ES	0.33	50	50	ENSMUST00000201266.4	ENSMUSG00000029203.17	Ube2k	chr5	protein_coding	ubiquitin-conjugating enzyme E2K
chr5	65723425	65738729	+	65723425	65728875	A3SS&ES	0.5	50	50	ENSMUST00000201266.4	ENSMUSG00000029203.17	Ube2k	chr5	protein_coding	ubiquitin-conjugating enzyme E2K
chr5	65728933	65738729	+	65728933	65751763	A3SS	0.33	50	50	ENSMUST00000201266.4	ENSMUSG00000029203.17	Ube2k	chr5	protein_coding	ubiquitin-conjugating enzyme E2K
chr5	65694889	65728875	+	65723425	65728875	A5SS&ES	0.5	50	50	ENSMUST00000201292.4	ENSMUSG00000029203.17	Ube2k	chr5	protein_coding	ubiquitin-conjugating enzyme E2K
chr5	65694889	65738729	+	65728933	65738729	A5SS&ES	0.25	50	50	ENSMUST00000201292.4	ENSMUSG00000029203.17	Ube2k	chr5	protein_coding	ubiquitin-conjugating enzyme E2K
chr5	65694889;65723425	65723332;65738729	+	65694889	65738729	cassetteExon	0.5	100	100	ENSMUST00000201984.4	ENSMUSG00000029203.17	Ube2k	chr5	protein_coding	ubiquitin-conjugating enzyme E2K
chr5	65694889;65728933	65728875;65738729	+	65694889	65738729	cassetteExon	0.5	100	100	ENSMUST00000201984.4	ENSMUSG00000029203.17	Ube2k	chr5	protein_coding	ubiquitin-conjugating enzyme E2K
chr5	65694889;65728933	65728875;65749219	+	65694889;65738811	65738729;65749219	MXE	0.5	100	100	ENSMUST00000201984.4	ENSMUSG00000029203.17	Ube2k	chr5	protein_coding	ubiquitin-conjugating enzyme E2K
chr5	65694889;65728933	65728875;65751763	+	65694889;65749318	65738729;65751763	MXE	0.5	100	100	ENSMUST00000201984.4	ENSMUSG00000029203.17	Ube2k	chr5	protein_coding	ubiquitin-conjugating enzyme E2K
chr5	65694801	65738729	+	65694889	65738729	A5SS	0.25	50	50	ENSMUST00000201984.4	ENSMUSG00000029203.17	Ube2k	chr5	protein_coding	ubiquitin-conjugating enzyme E2K
chr5	65694889;65723425	65723332;65738729	+	65694889;65728933	65728875;65738729	MXE	0.5	100	100	ENSMUST00000202679.4	ENSMUSG00000029203.17	Ube2k	chr5	protein_coding	ubiquitin-conjugating enzyme E2K
chr5	65694801;65723425	65723332;65738729	+	65694801	65738729	cassetteExon	0.5	100	100	ENSMUST00000202082.4	ENSMUSG00000029203.17	Ube2k	chr5	protein_coding	ubiquitin-conjugating enzyme E2K
chr5	65728933	65749219	+	65738811	65749219	A5SS&ES	0.5	50	50	ENSMUST00000202082.4	ENSMUSG00000029203.17	Ube2k	chr5	protein_coding	ubiquitin-conjugating enzyme E2K
chr5	65728933	65751763	+	65749318	65751763	A5SS&ES	0.5	50	50	ENSMUST00000202082.4	ENSMUSG00000029203.17	Ube2k	chr5	protein_coding	ubiquitin-conjugating enzyme E2K
chr5	65694889;65728933	65728875;65749219	+	65694889;65738811	65723332;65749219	MXE	0.5	100	100	ENSMUST00000202601.4	ENSMUSG00000029203.17	Ube2k	chr5	protein_coding	ubiquitin-conjugating enzyme E2K
chr5	65694889;65728933	65728875;65751763	+	65694889;65749318	65723332;65751763	MXE	0.5	100	100	ENSMUST00000202601.4	ENSMUSG00000029203.17	Ube2k	chr5	protein_coding	ubiquitin-conjugating enzyme E2K
chr5	65723425;65728933	65728875;65749219	+	65723425;65738811	65738729;65749219	MXE	0.5	100	100	ENSMUST00000202601.4	ENSMUSG00000029203.17	Ube2k	chr5	protein_coding	ubiquitin-conjugating enzyme E2K
chr5	65723425;65728933	65728875;65751763	+	65723425;65749318	65738729;65751763	MXE	0.5	100	100	ENSMUST00000202601.4	ENSMUSG00000029203.17	Ube2k	chr5	protein_coding	ubiquitin-conjugating enzyme E2K
chr5	65694801	65738729	+	65723425	65738729	A5SS&ES	0.25	50	50	ENSMUST00000202601.4	ENSMUSG00000029203.17	Ube2k	chr5	protein_coding	ubiquitin-conjugating enzyme E2K
chr5	65749318	65752218	+	65749318	65751763	3pMXE	0.5	50	50	ENSMUST00000200946.3	ENSMUSG00000029203.17	Ube2k	chr5	protein_coding	ubiquitin-conjugating enzyme E2K
chr5	65728933;65751891	65751763;65752218	+	65728933;65749318	65738729;65752218	MXE	0.5	100	100	ENSMUST00000201383.2	ENSMUSG00000029203.17	Ube2k	chr5	protein_coding	ubiquitin-conjugating enzyme E2K
chr5	65767531	65776287	-	65772947	65776287	A3SS&ES	0.5	50	50	ENSMUST00000201948.4	ENSMUSG00000029202.13	Pds5a	chr5	protein_coding	PDS5 cohesin associated factor A
chr5	65918936	65920615	-	65918936	65921114	A5SS	0.5	50	50	ENSMUST00000202673.2	ENSMUSG00000106978.2	N4bp2os	chr5	lncRNA	NEDD4 binding protein 2, opposite strand
chr5	65933006;65941719	65941653;65943449	+	65933006	65943449	cassetteExon	0.5	100	100	ENSMUST00000201489.4	ENSMUSG00000037795.15	N4bp2	chr5	protein_coding	NEDD4 binding protein 2
chr5	65921588	65928730	+	65920933	65928730	A5SS	0.5	50	50	ENSMUST00000201489.4	ENSMUSG00000037795.15	N4bp2	chr5	protein_coding	NEDD4 binding protein 2
chr5	65933006	65941653	+	65933006	65947361	A3SS	0.33	50	50	ENSMUST00000201615.4	ENSMUSG00000037795.15	N4bp2	chr5	protein_coding	NEDD4 binding protein 2
chr5	65933006	65943449	+	65933006	65947361	A3SS	0.33	50	50	ENSMUST00000201615.4	ENSMUSG00000037795.15	N4bp2	chr5	protein_coding	NEDD4 binding protein 2
chr5	65945484	65947361	+	65933006	65947361	A5SS	0.5	50	50	ENSMUST00000201615.4	ENSMUSG00000037795.15	N4bp2	chr5	protein_coding	NEDD4 binding protein 2
chr5	66021224	66048896	+	66020493	66048896	A5SS	0.5	50	50	ENSMUST00000031106.8	ENSMUSG00000029204.8	Rhoh	chr5	protein_coding	ras homolog family member H
chr5	66021224	66025129	+	66021224	66048896	A3SS	0.5	50	50	ENSMUST00000201533.2	ENSMUSG00000029204.8	Rhoh	chr5	protein_coding	ras homolog family member H
chr5	66092377	66125125	+	66092377;66092839	66092745;66125125	ES	0.33	50	50	ENSMUST00000202957.2	ENSMUSG00000029205.13	Chrna9	chr5	protein_coding	cholinergic receptor, nicotinic, alpha polypeptide 9
chr5	66092377	66095432	+	66092377	66092745	A3SS&ES	0.25	50	50	ENSMUST00000202957.2	ENSMUSG00000029205.13	Chrna9	chr5	protein_coding	cholinergic receptor, nicotinic, alpha polypeptide 9
chr5	66092377	66101430	+	66092377	66092745	A3SS&ES	0.25	50	50	ENSMUST00000202957.2	ENSMUSG00000029205.13	Chrna9	chr5	protein_coding	cholinergic receptor, nicotinic, alpha polypeptide 9
chr5	66124854	66125125	+	66092839	66125125	A5SS	0.33	50	50	ENSMUST00000202957.2	ENSMUSG00000029205.13	Chrna9	chr5	protein_coding	cholinergic receptor, nicotinic, alpha polypeptide 9
chr5	66092377	66095432	+	66092377	66125125	A3SS	0.25	50	50	ENSMUST00000201814.4	ENSMUSG00000029205.13	Chrna9	chr5	protein_coding	cholinergic receptor, nicotinic, alpha polypeptide 9
chr5	66092377	66101430	+	66092377	66125125	A3SS	0.25	50	50	ENSMUST00000201814.4	ENSMUSG00000029205.13	Chrna9	chr5	protein_coding	cholinergic receptor, nicotinic, alpha polypeptide 9
chr5	66124854	66125125	+	66092377	66125125	A5SS	0.33	50	50	ENSMUST00000201814.4	ENSMUSG00000029205.13	Chrna9	chr5	protein_coding	cholinergic receptor, nicotinic, alpha polypeptide 9
chr5	66092377	66125125	+	66092377	66092745	3pMXE	0.25	50	50	ENSMUST00000200881.2	ENSMUSG00000029205.13	Chrna9	chr5	protein_coding	cholinergic receptor, nicotinic, alpha polypeptide 9
chr5	66092377;66095600	66095432;66101430	+	66092377	66101430	cassetteExon	0.5	100	100	ENSMUST00000202735.2	ENSMUSG00000029205.13	Chrna9	chr5	protein_coding	cholinergic receptor, nicotinic, alpha polypeptide 9
chr5	66133353	66134049	+	66128691	66134049	A5SS	0.5	50	50	ENSMUST00000031108.9	ENSMUSG00000029205.13	Chrna9	chr5	protein_coding	cholinergic receptor, nicotinic, alpha polypeptide 9
chr5	66145876	66147181	-	66140110	66147181	A3SS	0.5	50	50	ENSMUST00000201562.2	ENSMUSG00000054598.14	9130230L23Rik	chr5	protein_coding	RIKEN cDNA 9130230L23 gene
chr5	66157798	66158199	-	66157798	66158227	A5SS	0.5	50	50	ENSMUST00000201351.4	ENSMUSG00000054598.14	9130230L23Rik	chr5	protein_coding	RIKEN cDNA 9130230L23 gene
chr5	66157884	66158199	-	66157798	66158199	A3SS	0.5	50	50	ENSMUST00000202773.4	ENSMUSG00000054598.14	9130230L23Rik	chr5	protein_coding	RIKEN cDNA 9130230L23 gene
chr5	66180176	66183473	-	66180176;66182502	66182296;66183473	ES	0.5	50	50	ENSMUST00000113726.8	ENSMUSG00000070780.12	Rbm47	chr5	protein_coding	RNA binding motif protein 47
chr5	66255131	66307859	-	66255131	66255502	5pMXE	0.25	50	50	ENSMUST00000113726.8	ENSMUSG00000070780.12	Rbm47	chr5	protein_coding	RNA binding motif protein 47
chr5	66255131	66308396	-	66255131	66255502	5pMXE	0.25	50	50	ENSMUST00000113726.8	ENSMUSG00000070780.12	Rbm47	chr5	protein_coding	RNA binding motif protein 47
chr5	66255131	66308882	-	66255131	66255502	5pMXE	0.25	50	50	ENSMUST00000113726.8	ENSMUSG00000070780.12	Rbm47	chr5	protein_coding	RNA binding motif protein 47
chr5	66184632	66238282	-	66184632	66203430	A5SS&ES	0.5	50	50	ENSMUST00000113726.8	ENSMUSG00000070780.12	Rbm47	chr5	protein_coding	RNA binding motif protein 47
chr5	66203556	66211825	-	66203556	66255050	A5SS	0.2	50	50	ENSMUST00000113726.8	ENSMUSG00000070780.12	Rbm47	chr5	protein_coding	RNA binding motif protein 47
chr5	66203556	66226141	-	66203556	66255050	A5SS	0.2	50	50	ENSMUST00000113726.8	ENSMUSG00000070780.12	Rbm47	chr5	protein_coding	RNA binding motif protein 47
chr5	66203556	66238282	-	66203556	66255050	A5SS	0.2	50	50	ENSMUST00000113726.8	ENSMUSG00000070780.12	Rbm47	chr5	protein_coding	RNA binding motif protein 47
chr5	66203556	66239116	-	66203556	66255050	A5SS	0.2	50	50	ENSMUST00000113726.8	ENSMUSG00000070780.12	Rbm47	chr5	protein_coding	RNA binding motif protein 47
chr5	66255131;66308528	66308396;66308882	-	66255131	66308882	cassetteExon	0.5	100	100	ENSMUST00000201544.4	ENSMUSG00000070780.12	Rbm47	chr5	protein_coding	RNA binding motif protein 47
chr5	66255131	66307859	-	66255131	66308882	A5SS	0.25	50	50	ENSMUST00000201544.4	ENSMUSG00000070780.12	Rbm47	chr5	protein_coding	RNA binding motif protein 47
chr5	66184632	66238282	-	66184632;66203556	66203430;66238282	ES	0.33	50	50	ENSMUST00000094757.9	ENSMUSG00000070780.12	Rbm47	chr5	protein_coding	RNA binding motif protein 47
chr5	66203556	66239116	-	66203556	66238282	5pMXE	0.2	50	50	ENSMUST00000094757.9	ENSMUSG00000070780.12	Rbm47	chr5	protein_coding	RNA binding motif protein 47
chr5	66203556;66226229	66226141;66238282	-	66203556	66238282	cassetteExon	0.5	100	100	ENSMUST00000094757.9	ENSMUSG00000070780.12	Rbm47	chr5	protein_coding	RNA binding motif protein 47
chr5	66203556	66211825	-	66203556	66238282	A5SS	0.2	50	50	ENSMUST00000094757.9	ENSMUSG00000070780.12	Rbm47	chr5	protein_coding	RNA binding motif protein 47
chr5	66255131	66308396	-	66255131	66307859	A5SS	0.25	50	50	ENSMUST00000200775.4	ENSMUSG00000070780.12	Rbm47	chr5	protein_coding	RNA binding motif protein 47
chr5	66226229	66238282	-	66184632	66238282	A3SS	0.33	50	50	ENSMUST00000113724.6	ENSMUSG00000070780.12	Rbm47	chr5	protein_coding	RNA binding motif protein 47
chr5	66203556	66226141	-	66203556	66211825	5pMXE	0.2	50	50	ENSMUST00000200852.4	ENSMUSG00000070780.12	Rbm47	chr5	protein_coding	RNA binding motif protein 47
chr5	66203556	66239116	-	66203556	66211825	5pMXE	0.2	50	50	ENSMUST00000200852.4	ENSMUSG00000070780.12	Rbm47	chr5	protein_coding	RNA binding motif protein 47
chr5	66203556	66226141	-	66203556	66239116	A5SS	0.25	50	50	ENSMUST00000201311.4	ENSMUSG00000070780.12	Rbm47	chr5	protein_coding	RNA binding motif protein 47
chr5	66255131	66308882	-	66255131	66308396	5pMXE	0.25	50	50	ENSMUST00000201561.4	ENSMUSG00000070780.12	Rbm47	chr5	protein_coding	RNA binding motif protein 47
chr5	66418587	66421834	+	66418587;66421410	66421352;66421834	ES	0.5	50	50	ENSMUST00000202994.4	ENSMUSG00000029206.14	Nsun7	chr5	protein_coding	NOL1/NOP2/Sun domain family, member 7
chr5	66441078;66441632	66441531;66446762	+	66441078	66446762	cassetteExon	0.5	100	100	ENSMUST00000202994.4	ENSMUSG00000029206.14	Nsun7	chr5	protein_coding	NOL1/NOP2/Sun domain family, member 7
chr5	66453257	66455185	+	66453257	66455166	A3SS	0.5	50	50	ENSMUST00000201100.4	ENSMUSG00000029206.14	Nsun7	chr5	protein_coding	NOL1/NOP2/Sun domain family, member 7
chr5	66468423	66469502	-	66468426	66469502	A3SS	0.5	50	50	ENSMUST00000162955.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66549200	66608811	-	66549200;66557624	66557419;66608811	ES	0.33	50	50	ENSMUST00000162366.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66619509	66700805	-	66619509;66649515	66649401;66700805	ES	0.5	50	50	ENSMUST00000162366.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66649515	66775911	-	66649515;66700960	66700805;66775911	ES	0.5	50	50	ENSMUST00000162366.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66470772;66480950	66480945;66520061	-	66470772	66520061	cassetteExon	0.5	100	100	ENSMUST00000162366.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66549200;66549678	66549616;66557419	-	66549200	66557419	cassetteExon	0.5	100	100	ENSMUST00000162366.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66557627	66608811	-	66557624	66608811	A3SS	0.33	50	50	ENSMUST00000162366.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66470772	66494809	-	66470772	66520061	A5SS	0.2	50	50	ENSMUST00000162366.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66470772	66520054	-	66470772	66520061	A5SS	0.2	50	50	ENSMUST00000162366.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66470772	66520057	-	66470772	66520061	A5SS	0.2	50	50	ENSMUST00000162366.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66619509	66672134	-	66619509	66649401	A5SS&ES	0.33	50	50	ENSMUST00000162366.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66649515	66672134	-	66649515	66700805	A5SS	0.25	50	50	ENSMUST00000162366.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66649515	66700742	-	66649515	66700805	A5SS	0.25	50	50	ENSMUST00000162366.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66700960	66704006	-	66700960	66775911	A5SS	0.5	50	50	ENSMUST00000162366.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66549200	66608811	-	66549200;66557627	66557419;66608811	ES	0.33	50	50	ENSMUST00000159512.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66649515	66775911	-	66649515;66700960	66700742;66775911	ES	0.5	50	50	ENSMUST00000159512.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66619509	66700805	-	66619509	66649401	A5SS&ES	0.33	50	50	ENSMUST00000159512.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66649515	66672134	-	66649515	66700742	A5SS	0.25	50	50	ENSMUST00000159512.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66549200	66549616	-	66549200	66608811	A5SS	0.33	50	50	ENSMUST00000201776.4	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66470772	66520054	-	66470772	66494809	5pMXE	0.2	50	50	ENSMUST00000160775.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66470772	66520057	-	66470772	66494809	5pMXE	0.2	50	50	ENSMUST00000160775.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66470772	66480945	-	66470772	66494809	A5SS	0.2	50	50	ENSMUST00000160775.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66470772	66520054	-	66470772	66480945	A5SS&ES	0.2	50	50	ENSMUST00000162349.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66470772	66520057	-	66470772	66480945	A5SS&ES	0.2	50	50	ENSMUST00000162349.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66480950	66494769	-	66480950	66520061	A5SS	0.5	50	50	ENSMUST00000162349.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66470772	66520057	-	66470772	66520054	A5SS	0.2	50	50	ENSMUST00000087256.12	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66549200	66608811	-	66557624	66608811	3pMXE	0.33	50	50	ENSMUST00000162401.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66549200	66608811	-	66557627	66608811	3pMXE	0.33	50	50	ENSMUST00000160185.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66619509;66649515	66649401;66775911	-	66619509;66700960	66700805;66775911	MXE	0.5	100	100	ENSMUST00000162382.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66619509	66672134	-	66619509	66700805	A5SS	0.33	50	50	ENSMUST00000162382.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66619509;66649515	66649401;66672134	-	66619509	66672134	cassetteExon	0.5	100	100	ENSMUST00000161879.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66649515	66672134	-	66649515	66775911	A5SS	0.25	50	50	ENSMUST00000160103.8	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	66649515	66775911	-	66700960	66775911	3pMXE	0.5	50	50	ENSMUST00000159847.2	ENSMUSG00000029207.17	Apbb2	chr5	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 2
chr5	67111118	67118500	+	67111118;67116961	67116931;67118500	ES	0.5	50	50	ENSMUST00000201852.4	ENSMUSG00000037736.21	Limch1	chr5	protein_coding	LIM and calponin homology domains 1
chr5	67039311;67094810	67094719;67111012	+	67039311	67111012	cassetteExon	0.5	100	100	ENSMUST00000201852.4	ENSMUSG00000037736.21	Limch1	chr5	protein_coding	LIM and calponin homology domains 1
chr5	67055966	67111012	+	67039311	67111012	A5SS	0.33	50	50	ENSMUST00000201852.4	ENSMUSG00000037736.21	Limch1	chr5	protein_coding	LIM and calponin homology domains 1
chr5	67125618	67126419	+	67118610	67126419	A5SS	0.25	50	50	ENSMUST00000201852.4	ENSMUSG00000037736.21	Limch1	chr5	protein_coding	LIM and calponin homology domains 1
chr5	67126076	67126419	+	67118610	67126419	A5SS	0.25	50	50	ENSMUST00000201852.4	ENSMUSG00000037736.21	Limch1	chr5	protein_coding	LIM and calponin homology domains 1
chr5	67126083	67126419	+	67118610	67126419	A5SS	0.25	50	50	ENSMUST00000201852.4	ENSMUSG00000037736.21	Limch1	chr5	protein_coding	LIM and calponin homology domains 1
chr5	67132005	67154463	+	67132005;67150521	67150486;67154463	ES	0.33	50	50	ENSMUST00000101164.11	ENSMUSG00000037736.21	Limch1	chr5	protein_coding	LIM and calponin homology domains 1
chr5	67179340;67182716	67182648;67183415	+	67179340	67183415	cassetteExon	0.5	100	100	ENSMUST00000101164.11	ENSMUSG00000037736.21	Limch1	chr5	protein_coding	LIM and calponin homology domains 1
chr5	67191632;67193446	67193369;67201689	+	67191632	67201689	cassetteExon	0.5	100	100	ENSMUST00000101164.11	ENSMUSG00000037736.21	Limch1	chr5	protein_coding	LIM and calponin homology domains 1
chr5	67132005	67132902	+	67132005	67150486	A3SS	0.33	50	50	ENSMUST00000101164.11	ENSMUSG00000037736.21	Limch1	chr5	protein_coding	LIM and calponin homology domains 1
chr5	67134437	67154463	+	67150521	67154463	A5SS&ES	0.33	50	50	ENSMUST00000101164.11	ENSMUSG00000037736.21	Limch1	chr5	protein_coding	LIM and calponin homology domains 1
chr5	67145385	67150486	+	67132005	67150486	A5SS	0.5	50	50	ENSMUST00000101164.11	ENSMUSG00000037736.21	Limch1	chr5	protein_coding	LIM and calponin homology domains 1
chr5	67201303	67201689	+	67191632	67201689	A5SS	0.33	50	50	ENSMUST00000101164.11	ENSMUSG00000037736.21	Limch1	chr5	protein_coding	LIM and calponin homology domains 1
chr5	67132005	67132902	+	67132005	67154463	A3SS	0.33	50	50	ENSMUST00000118242.8	ENSMUSG00000037736.21	Limch1	chr5	protein_coding	LIM and calponin homology domains 1
chr5	67134437	67154463	+	67132005	67154463	A5SS	0.33	50	50	ENSMUST00000118242.8	ENSMUSG00000037736.21	Limch1	chr5	protein_coding	LIM and calponin homology domains 1
chr5	67055966	67111012	+	67094810	67111012	A5SS&ES	0.33	50	50	ENSMUST00000130228.2	ENSMUSG00000037736.21	Limch1	chr5	protein_coding	LIM and calponin homology domains 1
chr5	67126076	67126419	+	67125618	67126419	A5SS	0.25	50	50	ENSMUST00000201322.4	ENSMUSG00000037736.21	Limch1	chr5	protein_coding	LIM and calponin homology domains 1
chr5	67126083	67126419	+	67125618	67126419	A5SS	0.25	50	50	ENSMUST00000201322.4	ENSMUSG00000037736.21	Limch1	chr5	protein_coding	LIM and calponin homology domains 1
chr5	67126083	67126419	+	67126076	67126419	A5SS	0.25	50	50	ENSMUST00000238993.2	ENSMUSG00000037736.21	Limch1	chr5	protein_coding	LIM and calponin homology domains 1
chr5	67201303	67201689	+	67193446	67201689	A5SS	0.33	50	50	ENSMUST00000238993.2	ENSMUSG00000037736.21	Limch1	chr5	protein_coding	LIM and calponin homology domains 1
chr5	67418376	67421613	+	67418376;67421167	67421073;67421613	ES	0.5	50	50	ENSMUST00000037918.12	ENSMUSG00000037720.17	Tmem33	chr5	protein_coding	transmembrane protein 33
chr5	67421167	67424645	+	67421167;67421800	67421613;67424645	ES	0.5	50	50	ENSMUST00000037918.12	ENSMUSG00000037720.17	Tmem33	chr5	protein_coding	transmembrane protein 33
chr5	67418376;67419997	67419821;67421073	+	67418376	67421073	cassetteExon	0.5	100	100	ENSMUST00000037918.12	ENSMUSG00000037720.17	Tmem33	chr5	protein_coding	transmembrane protein 33
chr5	67421167	67424645	+	67421167	67421613	3pMXE	0.5	50	50	ENSMUST00000162543.8	ENSMUSG00000037720.17	Tmem33	chr5	protein_coding	transmembrane protein 33
chr5	67418376;67421167	67421073;67424645	+	67418376;67421800	67421613;67424645	MXE	0.5	100	100	ENSMUST00000161233.8	ENSMUSG00000037720.17	Tmem33	chr5	protein_coding	transmembrane protein 33
chr5	67418376	67419821	+	67418376	67421613	A3SS	0.33	50	50	ENSMUST00000161233.8	ENSMUSG00000037720.17	Tmem33	chr5	protein_coding	transmembrane protein 33
chr5	67473188	67485041	+	67473188;67484295	67484196;67485041	ES	0.5	50	50	ENSMUST00000113676.6	ENSMUSG00000029221.16	Slc30a9	chr5	protein_coding	solute carrier family 30 (zinc transporter), member 9
chr5	67473188;67482076	67482017;67484196	+	67473188	67484196	cassetteExon	0.5	100	100	ENSMUST00000113676.6	ENSMUSG00000029221.16	Slc30a9	chr5	protein_coding	solute carrier family 30 (zinc transporter), member 9
chr5	67473188;67482076	67482020;67484196	+	67473188	67484196	cassetteExon	0.5	100	100	ENSMUST00000113676.6	ENSMUSG00000029221.16	Slc30a9	chr5	protein_coding	solute carrier family 30 (zinc transporter), member 9
chr5	67473188	67476058	+	67473188	67484196	A3SS	0.2	50	50	ENSMUST00000113676.6	ENSMUSG00000029221.16	Slc30a9	chr5	protein_coding	solute carrier family 30 (zinc transporter), member 9
chr5	67487294	67491849	+	67487294	67490397	A3SS&ES	0.5	50	50	ENSMUST00000113676.6	ENSMUSG00000029221.16	Slc30a9	chr5	protein_coding	solute carrier family 30 (zinc transporter), member 9
chr5	67464936	67473021	+	67464540	67473021	A5SS	0.5	50	50	ENSMUST00000113676.6	ENSMUSG00000029221.16	Slc30a9	chr5	protein_coding	solute carrier family 30 (zinc transporter), member 9
chr5	67473188	67476058	+	67473188	67482017	A3SS	0.2	50	50	ENSMUST00000162372.8	ENSMUSG00000029221.16	Slc30a9	chr5	protein_coding	solute carrier family 30 (zinc transporter), member 9
chr5	67473188	67482020	+	67473188	67482017	A3SS	0.2	50	50	ENSMUST00000162372.8	ENSMUSG00000029221.16	Slc30a9	chr5	protein_coding	solute carrier family 30 (zinc transporter), member 9
chr5	67473188	67476058	+	67473188	67485041	A3SS	0.2	50	50	ENSMUST00000202521.4	ENSMUSG00000029221.16	Slc30a9	chr5	protein_coding	solute carrier family 30 (zinc transporter), member 9
chr5	67473188	67482017	+	67473188	67485041	A3SS	0.2	50	50	ENSMUST00000202521.4	ENSMUSG00000029221.16	Slc30a9	chr5	protein_coding	solute carrier family 30 (zinc transporter), member 9
chr5	67473188	67482020	+	67473188	67485041	A3SS	0.2	50	50	ENSMUST00000202521.4	ENSMUSG00000029221.16	Slc30a9	chr5	protein_coding	solute carrier family 30 (zinc transporter), member 9
chr5	67473188	67482020	+	67473188	67476058	3pMXE	0.2	50	50	ENSMUST00000159907.3	ENSMUSG00000029221.16	Slc30a9	chr5	protein_coding	solute carrier family 30 (zinc transporter), member 9
chr5	67555793	67557475	-	67555793	67557404	A5SS	0.5	50	50	ENSMUST00000169190.5	ENSMUSG00000092060.5	Bend4	chr5	protein_coding	BEN domain containing 4
chr5	67575365	67584812	-	67575365	67584409	A5SS	0.5	50	50	ENSMUST00000169190.5	ENSMUSG00000092060.5	Bend4	chr5	protein_coding	BEN domain containing 4
chr5	67626158	67630825	+	67626127	67630825	A5SS	0.5	50	50	ENSMUST00000202634.4	ENSMUSG00000107385.4	C330024D21Rik	chr5	lncRNA	RIKEN cDNA C330024D21 gene
chr5	67766027	67778604	+	67766027	67768379	3pMXE	0.5	50	50	ENSMUST00000087241.7	ENSMUSG00000050010.9	Shisa3	chr5	protein_coding	shisa family member 3
chr5	67933541	67943969	-	67933541;67938404	67938331;67943969	ES	0.33	50	50	ENSMUST00000135930.8	ENSMUSG00000037685.16	Atp8a1	chr5	protein_coding	ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
chr5	67944009	67969431	-	67944009;67963045	67963000;67969431	ES	0.5	50	50	ENSMUST00000135930.8	ENSMUSG00000037685.16	Atp8a1	chr5	protein_coding	ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
chr5	67908428;67914037	67913993;67918457	-	67908428	67918457	cassetteExon	0.5	100	100	ENSMUST00000135930.8	ENSMUSG00000037685.16	Atp8a1	chr5	protein_coding	ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
chr5	67933541;67936376	67936303;67943969	-	67933541;67938404	67938331;67943969	MXE	0.5	100	100	ENSMUST00000135930.8	ENSMUSG00000037685.16	Atp8a1	chr5	protein_coding	ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
chr5	67904698	67918457	-	67908428	67918457	A3SS&ES	0.33	50	50	ENSMUST00000135930.8	ENSMUSG00000037685.16	Atp8a1	chr5	protein_coding	ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
chr5	67972066	67972537	-	67972066	68004505	A5SS	0.33	50	50	ENSMUST00000135930.8	ENSMUSG00000037685.16	Atp8a1	chr5	protein_coding	ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
chr5	67972066	67973059	-	67972066	68004505	A5SS	0.33	50	50	ENSMUST00000135930.8	ENSMUSG00000037685.16	Atp8a1	chr5	protein_coding	ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
chr5	67933541	67943969	-	67933541;67936376	67936303;67943969	ES	0.33	50	50	ENSMUST00000037380.15	ENSMUSG00000037685.16	Atp8a1	chr5	protein_coding	ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
chr5	67904698	67918457	-	67914037	67918457	A3SS&ES	0.33	50	50	ENSMUST00000037380.15	ENSMUSG00000037685.16	Atp8a1	chr5	protein_coding	ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
chr5	67972066	67973059	-	67972066	67972537	5pMXE	0.33	50	50	ENSMUST00000130652.8	ENSMUSG00000037685.16	Atp8a1	chr5	protein_coding	ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
chr5	67933541	67943969	-	67938404	67943969	3pMXE	0.33	50	50	ENSMUST00000113652.8	ENSMUSG00000037685.16	Atp8a1	chr5	protein_coding	ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
chr5	67936376	67943969	-	67938404	67943969	3pMXE	0.33	50	50	ENSMUST00000113652.8	ENSMUSG00000037685.16	Atp8a1	chr5	protein_coding	ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
chr5	68004570;68037149	68037053;68059881	+	68004570;68053963	68053809;68059881	MXE	0.5	100	100	ENSMUST00000143945.3	ENSMUSG00000087261.3	Gm15477	chr5	lncRNA	predicted gene 15477
chr5	68099203	68132480	+	68099203;68102012	68101935;68132480	ES	0.5	50	50	ENSMUST00000202730.4	ENSMUSG00000094719.5	Gm5108	chr5	protein_coding	predicted gene 5108
chr5	68099203;68132526	68132480;68134188	+	68099203	68134188	cassetteExon	0.5	100	100	ENSMUST00000201736.4	ENSMUSG00000094719.5	Gm5108	chr5	protein_coding	predicted gene 5108
chr5	68099203	68101935	+	68099203	68134188	A3SS	0.33	50	50	ENSMUST00000201736.4	ENSMUSG00000094719.5	Gm5108	chr5	protein_coding	predicted gene 5108
chr5	69454065	69497675	-	69268138	69497675	A3SS	0.5	50	50	ENSMUST00000054095.6	ENSMUSG00000037653.8	Kctd8	chr5	protein_coding	potassium channel tetramerisation domain containing 8
chr5	69684697	69699904	-	69684697;69698506	69698390;69699904	ES	0.5	50	50	ENSMUST00000031045.10	ENSMUSG00000029158.10	Yipf7	chr5	protein_coding	Yip1 domain family, member 7
chr5	69719200	69722773	+	69719200;69721990	69721867;69722773	ES	0.5	50	50	ENSMUST00000154728.8	ENSMUSG00000029208.17	Guf1	chr5	protein_coding	GUF1 homolog, GTPase
chr5	69722905	69724471	+	69722905;69723847	69723704;69724471	ES	0.5	50	50	ENSMUST00000154728.8	ENSMUSG00000029208.17	Guf1	chr5	protein_coding	GUF1 homolog, GTPase
chr5	69719200;69720565	69720426;69721867	+	69719200	69721867	cassetteExon	0.5	100	100	ENSMUST00000154728.8	ENSMUSG00000029208.17	Guf1	chr5	protein_coding	GUF1 homolog, GTPase
chr5	69722905	69724471	+	69722905	69723704	3pMXE	0.5	50	50	ENSMUST00000125543.8	ENSMUSG00000029208.17	Guf1	chr5	protein_coding	GUF1 homolog, GTPase
chr5	69724604	69724694	+	69724604	69725739	A3SS	0.5	50	50	ENSMUST00000087228.11	ENSMUSG00000029208.17	Guf1	chr5	protein_coding	GUF1 homolog, GTPase
chr5	69719200	69720426	+	69719200	69722773	A3SS	0.33	50	50	ENSMUST00000031113.13	ENSMUSG00000029208.17	Guf1	chr5	protein_coding	GUF1 homolog, GTPase
chr5	69747166	69749551	-	69747166	69748003	5pMXE	0.5	50	50	ENSMUST00000139632.8	ENSMUSG00000029209.16	Gnpda2	chr5	protein_coding	glucosamine-6-phosphate deaminase 2
chr5	69743909;69746805	69746681;69747004	-	69743909	69747004	cassetteExon	0.5	100	100	ENSMUST00000139632.8	ENSMUSG00000029209.16	Gnpda2	chr5	protein_coding	glucosamine-6-phosphate deaminase 2
chr5	69734784	69735321	-	69733296	69735321	A3SS	0.5	50	50	ENSMUST00000139632.8	ENSMUSG00000029209.16	Gnpda2	chr5	protein_coding	glucosamine-6-phosphate deaminase 2
chr5	69737029	69742317	-	69737035	69742317	A3SS	0.33	50	50	ENSMUST00000139632.8	ENSMUSG00000029209.16	Gnpda2	chr5	protein_coding	glucosamine-6-phosphate deaminase 2
chr5	69739636	69742317	-	69737035	69742317	A3SS	0.33	50	50	ENSMUST00000139632.8	ENSMUSG00000029209.16	Gnpda2	chr5	protein_coding	glucosamine-6-phosphate deaminase 2
chr5	69739636	69742317	-	69737029	69742317	A3SS	0.33	50	50	ENSMUST00000166298.8	ENSMUSG00000029209.16	Gnpda2	chr5	protein_coding	glucosamine-6-phosphate deaminase 2
chr5	70931421	70931614	-	70911634	70931614	A3SS	0.5	50	50	ENSMUST00000031119.6	ENSMUSG00000001260.11	Gabrg1	chr5	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit gamma 1
chr5	70931702	70934461	-	70931825	70934461	A3SS	0.5	50	50	ENSMUST00000031119.6	ENSMUSG00000001260.11	Gabrg1	chr5	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit gamma 1
chr5	71171979	71249315	-	71171979;71192140	71192073;71249315	ES	0.5	50	50	ENSMUST00000197284.5	ENSMUSG00000000560.10	Gabra2	chr5	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 2
chr5	71119441;71125520	71125343;71130768	-	71119441	71130768	cassetteExon	0.5	100	100	ENSMUST00000197284.5	ENSMUSG00000000560.10	Gabra2	chr5	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 2
chr5	71171918	71192073	-	71171979	71192073	A3SS	0.33	50	50	ENSMUST00000197284.5	ENSMUSG00000000560.10	Gabra2	chr5	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 2
chr5	71251961	71252304	-	71251961	71252918	A5SS	0.5	50	50	ENSMUST00000197284.5	ENSMUSG00000000560.10	Gabra2	chr5	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 2
chr5	71171979	71249315	-	71192140	71249315	A3SS&ES	0.5	50	50	ENSMUST00000198625.5	ENSMUSG00000000560.10	Gabra2	chr5	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 2
chr5	71130970;71192140	71192073;71249315	-	71130970;71171979	71163450;71249315	MXE	0.5	100	100	ENSMUST00000000572.7	ENSMUSG00000000560.10	Gabra2	chr5	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 2
chr5	71171918	71192073	-	71130970	71192073	A3SS	0.33	50	50	ENSMUST00000199861.2	ENSMUSG00000000560.10	Gabra2	chr5	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 2
chr5	71171979	71192073	-	71130970	71192073	A3SS	0.33	50	50	ENSMUST00000199861.2	ENSMUSG00000000560.10	Gabra2	chr5	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 2
chr5	71130970	71163450	-	71130970	71192073	A5SS	0.5	50	50	ENSMUST00000199861.2	ENSMUSG00000000560.10	Gabra2	chr5	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 2
chr5	71799669	71814436	-	71799669	71814514	A5SS	0.5	50	50	ENSMUST00000031121.10	ENSMUSG00000029211.12	Gabra4	chr5	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 4
chr5	71814632	71815135	-	71814632	71815067	A5SS	0.5	50	50	ENSMUST00000031121.10	ENSMUSG00000029211.12	Gabra4	chr5	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 4
chr5	71729566	71814514	-	71729566	71781198	A5SS&ES	0.5	50	50	ENSMUST00000199357.2	ENSMUSG00000029211.12	Gabra4	chr5	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 4
chr5	71799669	71814514	-	71729566	71814514	A3SS	0.5	50	50	ENSMUST00000198138.2	ENSMUSG00000029211.12	Gabra4	chr5	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 4
chr5	71857438	71857632	+	71815706	71857632	A5SS	0.5	50	50	ENSMUST00000199967.5	ENSMUSG00000029212.12	Gabrb1	chr5	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit beta 1
chr5	72320217	72325422	-	72320217;72322849	72322694;72325422	ES	0.5	50	50	ENSMUST00000013693.11	ENSMUSG00000029213.12	Commd8	chr5	protein_coding	COMM domain containing 8
chr5	72320217;72322197	72322098;72322694	-	72320217	72322694	cassetteExon	0.5	100	100	ENSMUST00000013693.11	ENSMUSG00000029213.12	Commd8	chr5	protein_coding	COMM domain containing 8
chr5	72322849	72323027	-	72322849	72325422	A5SS	0.5	50	50	ENSMUST00000013693.11	ENSMUSG00000029213.12	Commd8	chr5	protein_coding	COMM domain containing 8
chr5	72320217	72322098	-	72320217	72325422	A5SS	0.33	50	50	ENSMUST00000196241.2	ENSMUSG00000029213.12	Commd8	chr5	protein_coding	COMM domain containing 8
chr5	72437512	72439497	+	72437512	72439448	A3SS	0.5	50	50	ENSMUST00000126664.8	ENSMUSG00000046808.18	Atp10d	chr5	polymorphic_pseudogene	ATPase, class V, type 10D
chr5	72422031	72423314	+	72421955	72423314	A5SS	0.5	50	50	ENSMUST00000126664.8	ENSMUSG00000046808.18	Atp10d	chr5	polymorphic_pseudogene	ATPase, class V, type 10D
chr5	72423511	72424750	+	72423417	72424750	A5SS	0.5	50	50	ENSMUST00000126664.8	ENSMUSG00000046808.18	Atp10d	chr5	polymorphic_pseudogene	ATPase, class V, type 10D
chr5	72514335	72517994	-	72514335;72515827	72515717;72517994	ES	0.5	50	50	ENSMUST00000167460.9	ENSMUSG00000005220.11	Corin	chr5	protein_coding	corin, serine peptidase
chr5	72592785	72629192	-	72592785;72611849	72611649;72629192	ES	0.5	50	50	ENSMUST00000167460.9	ENSMUSG00000005220.11	Corin	chr5	protein_coding	corin, serine peptidase
chr5	72529554	72537488	-	72529554	72579368	A5SS	0.5	50	50	ENSMUST00000167460.9	ENSMUSG00000005220.11	Corin	chr5	protein_coding	corin, serine peptidase
chr5	72629333	72661225	-	72629333	72661714	A5SS	0.5	50	50	ENSMUST00000167460.9	ENSMUSG00000005220.11	Corin	chr5	protein_coding	corin, serine peptidase
chr5	72514335;72518101	72517994;72529441	-	72514335	72529441	cassetteExon	0.5	100	100	ENSMUST00000175766.8	ENSMUSG00000005220.11	Corin	chr5	protein_coding	corin, serine peptidase
chr5	72514335	72515717	-	72514335	72529441	A5SS	0.33	50	50	ENSMUST00000175766.8	ENSMUSG00000005220.11	Corin	chr5	protein_coding	corin, serine peptidase
chr5	72514335	72517994	-	72515827	72517994	3pMXE	0.5	50	50	ENSMUST00000176439.2	ENSMUSG00000005220.11	Corin	chr5	protein_coding	corin, serine peptidase
chr5	72686847	72694709	-	72686847;72690478	72690388;72694709	ES	0.5	50	50	ENSMUST00000087216.12	ENSMUSG00000072889.10	Nfxl1	chr5	protein_coding	nuclear transcription factor, X-box binding-like 1
chr5	72734746;72735861	72735615;72737627	-	72734746	72737627	cassetteExon	0.5	100	100	ENSMUST00000202174.2	ENSMUSG00000063935.4	Zar1	chr5	protein_coding	zygote arrest 1
chr5	72743761	72744160	-	72743761	72744808	A5SS	0.5	50	50	ENSMUST00000239243.2	ENSMUSG00000060204.7	Slc10a4-ps	chr5	protein_coding	solute carrier family 10 (sodium/bile acid cotransporter family), pseudogene
chr5	72776475	72788228	-	72776475	72799845	A5SS	0.33	50	50	ENSMUST00000087213.12	ENSMUSG00000067220.13	Cnga1	chr5	protein_coding	cyclic nucleotide gated channel alpha 1
chr5	72776475	72795008	-	72776475	72799845	A5SS	0.33	50	50	ENSMUST00000087213.12	ENSMUSG00000067220.13	Cnga1	chr5	protein_coding	cyclic nucleotide gated channel alpha 1
chr5	72776475	72788228	-	72776475	72795008	A5SS	0.33	50	50	ENSMUST00000169997.6	ENSMUSG00000067220.13	Cnga1	chr5	protein_coding	cyclic nucleotide gated channel alpha 1
chr5	72805276	72818099	+	72805276;72816291	72816025;72818099	ES	0.5	50	50	ENSMUST00000087212.8	ENSMUSG00000067219.10	Nipal1	chr5	protein_coding	NIPA-like domain containing 1
chr5	72805276	72818099	+	72805276	72816025	3pMXE	0.5	50	50	ENSMUST00000197772.3	ENSMUSG00000067219.10	Nipal1	chr5	protein_coding	NIPA-like domain containing 1
chr5	72881808	72891585	-	72881808;72889172	72889107;72891585	ES	0.5	50	50	ENSMUST00000169534.6	ENSMUSG00000054892.15	Txk	chr5	protein_coding	TXK tyrosine kinase
chr5	72892555	72893705	-	72892559	72893705	A3SS	0.5	50	50	ENSMUST00000169534.6	ENSMUSG00000054892.15	Txk	chr5	protein_coding	TXK tyrosine kinase
chr5	72892559	72892906	-	72892559	72893705	A5SS	0.33	50	50	ENSMUST00000169534.6	ENSMUSG00000054892.15	Txk	chr5	protein_coding	TXK tyrosine kinase
chr5	72892559	72893069	-	72892559	72893705	A5SS	0.33	50	50	ENSMUST00000169534.6	ENSMUSG00000054892.15	Txk	chr5	protein_coding	TXK tyrosine kinase
chr5	72893783	72910022	-	72893762	72910022	A3SS	0.5	50	50	ENSMUST00000197313.5	ENSMUSG00000054892.15	Txk	chr5	protein_coding	TXK tyrosine kinase
chr5	72892559	72893069	-	72892559	72892906	A5SS	0.33	50	50	ENSMUST00000198970.5	ENSMUSG00000054892.15	Txk	chr5	protein_coding	TXK tyrosine kinase
chr5	72931228	72939346	-	72931228;72936829	72936764;72939346	ES	0.5	50	50	ENSMUST00000071944.13	ENSMUSG00000029217.17	Tec	chr5	protein_coding	tec protein tyrosine kinase
chr5	72980984	73025737	-	72980984;72982473	72982387;73025737	ES	0.5	50	50	ENSMUST00000071944.13	ENSMUSG00000029217.17	Tec	chr5	protein_coding	tec protein tyrosine kinase
chr5	72941117	72943260	-	72941101	72943260	A3SS	0.5	50	50	ENSMUST00000071944.13	ENSMUSG00000029217.17	Tec	chr5	protein_coding	tec protein tyrosine kinase
chr5	72944121	72946483	-	72944162	72946483	A3SS	0.5	50	50	ENSMUST00000071944.13	ENSMUSG00000029217.17	Tec	chr5	protein_coding	tec protein tyrosine kinase
chr5	72980984	72982380	-	72980984	72982387	A5SS	0.33	50	50	ENSMUST00000071944.13	ENSMUSG00000029217.17	Tec	chr5	protein_coding	tec protein tyrosine kinase
chr5	72982473	73001690	-	72982473	73025737	A5SS	0.5	50	50	ENSMUST00000071944.13	ENSMUSG00000029217.17	Tec	chr5	protein_coding	tec protein tyrosine kinase
chr5	72980984;72982473	72982380;73025737	-	72980984	73025737	cassetteExon	0.5	100	100	ENSMUST00000113594.8	ENSMUSG00000029217.17	Tec	chr5	protein_coding	tec protein tyrosine kinase
chr5	73115629;73123224	73123147;73131874	+	73115629	73131874	cassetteExon	0.5	100	100	ENSMUST00000144843.8	ENSMUSG00000036087.19	Slain2	chr5	protein_coding	SLAIN motif family, member 2
chr5	73164332	73165703	+	73164999	73165703	A5SS	0.5	50	50	ENSMUST00000031127.11	ENSMUSG00000029219.11	Slc10a4	chr5	protein_coding	solute carrier family 10 (sodium/bile acid cotransporter family), member 4
chr5	73181341;73182131	73182114;73184659	-	73181341	73184659	cassetteExon	0.5	100	100	ENSMUST00000202697.4	ENSMUSG00000070733.14	Fryl	chr5	protein_coding	FRY like transcription coactivator
chr5	73226257;73227347	73227226;73228448	-	73226257	73228448	cassetteExon	0.5	100	100	ENSMUST00000202697.4	ENSMUSG00000070733.14	Fryl	chr5	protein_coding	FRY like transcription coactivator
chr5	73198936	73204294	-	73198936	73204863	A5SS	0.5	50	50	ENSMUST00000202697.4	ENSMUSG00000070733.14	Fryl	chr5	protein_coding	FRY like transcription coactivator
chr5	73270195;73272643	73272599;73275827	-	73270195	73275827	cassetteExon	0.5	100	100	ENSMUST00000101127.12	ENSMUSG00000070733.14	Fryl	chr5	protein_coding	FRY like transcription coactivator
chr5	73207716	73238307	-	73234085	73238307	A3SS&ES	0.5	50	50	ENSMUST00000101127.12	ENSMUSG00000070733.14	Fryl	chr5	protein_coding	FRY like transcription coactivator
chr5	73226254	73227226	-	73226257	73227226	A3SS	0.5	50	50	ENSMUST00000101127.12	ENSMUSG00000070733.14	Fryl	chr5	protein_coding	FRY like transcription coactivator
chr5	73228649	73230079	-	73228652	73230079	A3SS	0.5	50	50	ENSMUST00000101127.12	ENSMUSG00000070733.14	Fryl	chr5	protein_coding	FRY like transcription coactivator
chr5	73254909	73255502	-	73254912	73255502	A3SS	0.5	50	50	ENSMUST00000101127.12	ENSMUSG00000070733.14	Fryl	chr5	protein_coding	FRY like transcription coactivator
chr5	73305565	73325554	-	73305565	73352329	A5SS	0.33	50	50	ENSMUST00000101127.12	ENSMUSG00000070733.14	Fryl	chr5	protein_coding	FRY like transcription coactivator
chr5	73305565	73348959	-	73305565	73352329	A5SS	0.33	50	50	ENSMUST00000101127.12	ENSMUSG00000070733.14	Fryl	chr5	protein_coding	FRY like transcription coactivator
chr5	73226257	73228448	-	73227347	73228448	A3SS&ES	0.5	50	50	ENSMUST00000201277.2	ENSMUSG00000070733.14	Fryl	chr5	protein_coding	FRY like transcription coactivator
chr5	73305565	73348959	-	73305565	73325554	5pMXE	0.33	50	50	ENSMUST00000153923.8	ENSMUSG00000070733.14	Fryl	chr5	protein_coding	FRY like transcription coactivator
chr5	73429137	73441466	-	73429137;73440442	73440386;73441466	ES	0.5	50	50	ENSMUST00000188758.7	ENSMUSG00000100175.7	1700025M24Rik	chr5	lncRNA	RIKEN cDNA 1700025M24 gene
chr5	73429137;73439514	73439400;73440386	-	73429137	73440386	cassetteExon	0.5	100	100	ENSMUST00000188758.7	ENSMUSG00000100175.7	1700025M24Rik	chr5	lncRNA	RIKEN cDNA 1700025M24 gene
chr5	73426296	73428999	-	73426319	73428999	A3SS	0.5	50	50	ENSMUST00000188758.7	ENSMUSG00000100175.7	1700025M24Rik	chr5	lncRNA	RIKEN cDNA 1700025M24 gene
chr5	73429137	73439400	-	73429137	73441466	A5SS	0.33	50	50	ENSMUST00000187620.7	ENSMUSG00000100175.7	1700025M24Rik	chr5	lncRNA	RIKEN cDNA 1700025M24 gene
chr5	73450319	73452269	+	73450319;73451690	73451628;73452269	ES	0.5	50	50	ENSMUST00000071081.13	ENSMUSG00000029152.14	Ociad1	chr5	protein_coding	OCIA domain containing 1
chr5	73462027	73470786	+	73462027;73464141	73463921;73470786	ES	0.25	50	50	ENSMUST00000071081.13	ENSMUSG00000029152.14	Ociad1	chr5	protein_coding	OCIA domain containing 1
chr5	73450319;73451353	73451309;73451628	+	73450319	73451628	cassetteExon	0.5	100	100	ENSMUST00000071081.13	ENSMUSG00000029152.14	Ociad1	chr5	protein_coding	OCIA domain containing 1
chr5	73458060	73464009	+	73458060	73460935	A3SS&ES	0.5	50	50	ENSMUST00000071081.13	ENSMUSG00000029152.14	Ociad1	chr5	protein_coding	OCIA domain containing 1
chr5	73464096	73470786	+	73464141	73470786	A5SS	0.25	50	50	ENSMUST00000071081.13	ENSMUSG00000029152.14	Ociad1	chr5	protein_coding	OCIA domain containing 1
chr5	73467769	73470786	+	73464141	73470786	A5SS	0.25	50	50	ENSMUST00000071081.13	ENSMUSG00000029152.14	Ociad1	chr5	protein_coding	OCIA domain containing 1
chr5	73464096	73470786	+	73464096;73467769	73467617;73470786	ES	0.25	50	50	ENSMUST00000031038.11	ENSMUSG00000029152.14	Ociad1	chr5	protein_coding	OCIA domain containing 1
chr5	73462027	73470786	+	73462027	73463921	3pMXE	0.5	50	50	ENSMUST00000166823.5	ENSMUSG00000029152.14	Ociad1	chr5	protein_coding	OCIA domain containing 1
chr5	73450825	73451309	+	73450319	73451309	A5SS	0.5	50	50	ENSMUST00000202250.4	ENSMUSG00000029152.14	Ociad1	chr5	protein_coding	OCIA domain containing 1
chr5	73458060;73464096	73464009;73470786	+	73458060;73462027	73460935;73470786	MXE	0.5	100	100	ENSMUST00000201556.4	ENSMUSG00000029152.14	Ociad1	chr5	protein_coding	OCIA domain containing 1
chr5	73458060;73464141	73464009;73470786	+	73458060;73462027	73460935;73470786	MXE	0.5	100	100	ENSMUST00000201556.4	ENSMUSG00000029152.14	Ociad1	chr5	protein_coding	OCIA domain containing 1
chr5	73462027;73464096	73463921;73470786	+	73462027	73470786	cassetteExon	0.5	100	100	ENSMUST00000201556.4	ENSMUSG00000029152.14	Ociad1	chr5	protein_coding	OCIA domain containing 1
chr5	73467769	73470786	+	73462027	73470786	A5SS	0.25	50	50	ENSMUST00000201556.4	ENSMUSG00000029152.14	Ociad1	chr5	protein_coding	OCIA domain containing 1
chr5	73464096	73470786	+	73464096	73467617	3pMXE	0.5	50	50	ENSMUST00000202237.4	ENSMUSG00000029152.14	Ociad1	chr5	protein_coding	OCIA domain containing 1
chr5	73450319;73451690	73451309;73452269	+	73450319	73452269	cassetteExon	0.5	100	100	ENSMUST00000202237.4	ENSMUSG00000029152.14	Ociad1	chr5	protein_coding	OCIA domain containing 1
chr5	73481190	73485006	-	73481190;73483741	73483624;73485006	ES	0.5	50	50	ENSMUST00000200830.4	ENSMUSG00000029153.12	Ociad2	chr5	protein_coding	OCIA domain containing 2
chr5	73486663;73493288	73493163;73495874	-	73486663;73489543	73489447;73495874	MXE	0.5	100	100	ENSMUST00000200830.4	ENSMUSG00000029153.12	Ociad2	chr5	protein_coding	OCIA domain containing 2
chr5	73489543;73493288	73493163;73495874	-	73489543	73495874	cassetteExon	0.5	100	100	ENSMUST00000200830.4	ENSMUSG00000029153.12	Ociad2	chr5	protein_coding	OCIA domain containing 2
chr5	73486641	73489447	-	73486663	73489447	A3SS	0.5	50	50	ENSMUST00000200830.4	ENSMUSG00000029153.12	Ociad2	chr5	protein_coding	OCIA domain containing 2
chr5	73486663	73493163	-	73486663;73489543	73489447;73493163	ES	0.5	50	50	ENSMUST00000087195.9	ENSMUSG00000029153.12	Ociad2	chr5	protein_coding	OCIA domain containing 2
chr5	73493288	73498204	-	73493288	73495874	5pMXE	0.5	50	50	ENSMUST00000087195.9	ENSMUSG00000029153.12	Ociad2	chr5	protein_coding	OCIA domain containing 2
chr5	73486663	73493163	-	73489543	73493163	A3SS&ES	0.5	50	50	ENSMUST00000200776.4	ENSMUSG00000029153.12	Ociad2	chr5	protein_coding	OCIA domain containing 2
chr5	73489543	73495874	-	73489543	73493163	A5SS&ES	0.5	50	50	ENSMUST00000200821.2	ENSMUSG00000029153.12	Ociad2	chr5	protein_coding	OCIA domain containing 2
chr5	73538195	73547958	+	73538195	73538609	3pMXE	0.5	50	50	ENSMUST00000202537.2	ENSMUSG00000107272.2	Gm34583	chr5	transcribed_processed_pseudogene	predicted gene, 34583
chr5	73574139	73578797	+	73574139;73575544	73575287;73578797	ES	0.5	50	50	ENSMUST00000031040.13	ENSMUSG00000029154.14	Cwh43	chr5	protein_coding	cell wall biogenesis 43 C-terminal homolog
chr5	73677573	73688847	+	73677573;73680087	73679996;73688847	ES	0.5	50	50	ENSMUST00000087181.12	ENSMUSG00000051674.16	Dcun1d4	chr5	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
chr5	73692040	73712702	+	73692040;73701498	73701390;73712702	ES	0.5	50	50	ENSMUST00000087181.12	ENSMUSG00000051674.16	Dcun1d4	chr5	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
chr5	73701498	73714597	+	73701498;73712806	73712702;73714597	ES	0.5	50	50	ENSMUST00000087181.12	ENSMUSG00000051674.16	Dcun1d4	chr5	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
chr5	73677573;73678387	73678258;73679996	+	73677573	73679996	cassetteExon	0.5	100	100	ENSMUST00000087181.12	ENSMUSG00000051674.16	Dcun1d4	chr5	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
chr5	73642113	73668229	+	73638611	73668229	A5SS	0.14	50	50	ENSMUST00000087181.12	ENSMUSG00000051674.16	Dcun1d4	chr5	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
chr5	73648534	73668229	+	73638611	73668229	A5SS	0.14	50	50	ENSMUST00000087181.12	ENSMUSG00000051674.16	Dcun1d4	chr5	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
chr5	73648877	73668229	+	73638611	73668229	A5SS	0.14	50	50	ENSMUST00000087181.12	ENSMUSG00000051674.16	Dcun1d4	chr5	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
chr5	73650419	73668229	+	73638611	73668229	A5SS	0.14	50	50	ENSMUST00000087181.12	ENSMUSG00000051674.16	Dcun1d4	chr5	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
chr5	73660111	73668229	+	73638611	73668229	A5SS	0.14	50	50	ENSMUST00000087181.12	ENSMUSG00000051674.16	Dcun1d4	chr5	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
chr5	73668107	73668229	+	73638611	73668229	A5SS	0.14	50	50	ENSMUST00000087181.12	ENSMUSG00000051674.16	Dcun1d4	chr5	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
chr5	73692040;73701498	73701390;73714597	+	73692040;73712806	73712702;73714597	MXE	0.5	100	100	ENSMUST00000130087.8	ENSMUSG00000051674.16	Dcun1d4	chr5	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
chr5	73648534	73668229	+	73642113	73668229	A5SS	0.14	50	50	ENSMUST00000130087.8	ENSMUSG00000051674.16	Dcun1d4	chr5	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
chr5	73648877	73668229	+	73642113	73668229	A5SS	0.14	50	50	ENSMUST00000130087.8	ENSMUSG00000051674.16	Dcun1d4	chr5	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
chr5	73650419	73668229	+	73642113	73668229	A5SS	0.14	50	50	ENSMUST00000130087.8	ENSMUSG00000051674.16	Dcun1d4	chr5	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
chr5	73660111	73668229	+	73642113	73668229	A5SS	0.14	50	50	ENSMUST00000130087.8	ENSMUSG00000051674.16	Dcun1d4	chr5	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
chr5	73668107	73668229	+	73642113	73668229	A5SS	0.14	50	50	ENSMUST00000130087.8	ENSMUSG00000051674.16	Dcun1d4	chr5	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
chr5	73648877	73668229	+	73648534	73668229	A5SS	0.14	50	50	ENSMUST00000113558.8	ENSMUSG00000051674.16	Dcun1d4	chr5	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
chr5	73650419	73668229	+	73648534	73668229	A5SS	0.14	50	50	ENSMUST00000113558.8	ENSMUSG00000051674.16	Dcun1d4	chr5	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
chr5	73660111	73668229	+	73648534	73668229	A5SS	0.14	50	50	ENSMUST00000113558.8	ENSMUSG00000051674.16	Dcun1d4	chr5	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
chr5	73668107	73668229	+	73648534	73668229	A5SS	0.14	50	50	ENSMUST00000113558.8	ENSMUSG00000051674.16	Dcun1d4	chr5	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
chr5	73677573	73678258	+	73677573	73688847	A3SS	0.33	50	50	ENSMUST00000134092.9	ENSMUSG00000051674.16	Dcun1d4	chr5	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
chr5	73677573	73688847	+	73677573	73679996	3pMXE	0.33	50	50	ENSMUST00000141553.5	ENSMUSG00000051674.16	Dcun1d4	chr5	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
chr5	73650419	73668229	+	73648877	73668229	A5SS	0.14	50	50	ENSMUST00000141553.5	ENSMUSG00000051674.16	Dcun1d4	chr5	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
chr5	73660111	73668229	+	73648877	73668229	A5SS	0.14	50	50	ENSMUST00000141553.5	ENSMUSG00000051674.16	Dcun1d4	chr5	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
chr5	73668107	73668229	+	73648877	73668229	A5SS	0.14	50	50	ENSMUST00000141553.5	ENSMUSG00000051674.16	Dcun1d4	chr5	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
chr5	73650419	73668229	+	73650419;73660111	73659975;73668229	ES	0.33	50	50	ENSMUST00000145645.8	ENSMUSG00000051674.16	Dcun1d4	chr5	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
chr5	73660111;73668107	73667941;73668229	+	73660111	73668229	cassetteExon	0.5	100	100	ENSMUST00000145645.8	ENSMUSG00000051674.16	Dcun1d4	chr5	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
chr5	73668107	73668229	+	73650419	73668229	A5SS	0.14	50	50	ENSMUST00000156806.8	ENSMUSG00000051674.16	Dcun1d4	chr5	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
chr5	73787353	73787616	-	73787353	73789734	A5SS	0.5	50	50	ENSMUST00000087177.4	ENSMUSG00000067206.4	Lrrc66	chr5	protein_coding	leucine rich repeat containing 66
chr5	73816677	73825865	+	73816677;73824290	73824195;73825865	ES	0.5	50	50	ENSMUST00000071077.14	ENSMUSG00000029155.17	Spata18	chr5	protein_coding	spermatogenesis associated 18
chr5	73816688	73824195	+	73816677	73824195	A5SS	0.5	50	50	ENSMUST00000071077.14	ENSMUSG00000029155.17	Spata18	chr5	protein_coding	spermatogenesis associated 18
chr5	73834401	73836335	+	73834365	73836335	A5SS	0.5	50	50	ENSMUST00000071077.14	ENSMUSG00000029155.17	Spata18	chr5	protein_coding	spermatogenesis associated 18
chr5	73816677	73825865	+	73824290	73825865	A5SS&ES	0.5	50	50	ENSMUST00000113548.6	ENSMUSG00000029155.17	Spata18	chr5	protein_coding	spermatogenesis associated 18
chr5	74193178;74197774	74197694;74228911	-	74193178	74228911	cassetteExon	0.5	100	100	ENSMUST00000119154.8	ENSMUSG00000054814.15	Usp46	chr5	protein_coding	ubiquitin specific peptidase 46
chr5	74189694	74189802	-	74177397	74189802	A3SS	0.5	50	50	ENSMUST00000119154.8	ENSMUSG00000054814.15	Usp46	chr5	protein_coding	ubiquitin specific peptidase 46
chr5	74193178	74196209	-	74193178	74228911	A5SS	0.33	50	50	ENSMUST00000119154.8	ENSMUSG00000054814.15	Usp46	chr5	protein_coding	ubiquitin specific peptidase 46
chr5	74193178	74196209	-	74193178	74197694	A5SS	0.33	50	50	ENSMUST00000068058.14	ENSMUSG00000054814.15	Usp46	chr5	protein_coding	ubiquitin specific peptidase 46
chr5	74197774	74226308	-	74197774	74228911	A5SS	0.5	50	50	ENSMUST00000068058.14	ENSMUSG00000054814.15	Usp46	chr5	protein_coding	ubiquitin specific peptidase 46
chr5	74367056	74385976	-	74367056;74373031	74372912;74385976	ES	0.5	50	50	ENSMUST00000072857.13	ENSMUSG00000062110.15	Scfd2	chr5	protein_coding	Sec1 family domain containing 2
chr5	74556144	74558315	-	74397245	74558315	A3SS	0.5	50	50	ENSMUST00000072857.13	ENSMUSG00000062110.15	Scfd2	chr5	protein_coding	Sec1 family domain containing 2
chr5	74619303	74623221	-	74558564	74623221	A3SS	0.5	50	50	ENSMUST00000072857.13	ENSMUSG00000062110.15	Scfd2	chr5	protein_coding	Sec1 family domain containing 2
chr5	74676837	74680145	-	74642938	74680145	A3SS	0.5	50	50	ENSMUST00000072857.13	ENSMUSG00000062110.15	Scfd2	chr5	protein_coding	Sec1 family domain containing 2
chr5	74623396	74639614	-	74623396	74642811	A5SS	0.5	50	50	ENSMUST00000072857.13	ENSMUSG00000062110.15	Scfd2	chr5	protein_coding	Sec1 family domain containing 2
chr5	74696422	74697603	+	74696422;74697506	74697462;74697603	ES	0.5	50	50	ENSMUST00000080164.12	ENSMUSG00000029227.16	Fip1l1	chr5	protein_coding	FIP1 like 1 (S. cerevisiae)
chr5	74733246	74747664	+	74733246;74745733	74745707;74747664	ES	0.5	50	50	ENSMUST00000080164.12	ENSMUSG00000029227.16	Fip1l1	chr5	protein_coding	FIP1 like 1 (S. cerevisiae)
chr5	74707486;74707836	74707768;74717701	+	74707486	74717701	cassetteExon	0.5	100	100	ENSMUST00000080164.12	ENSMUSG00000029227.16	Fip1l1	chr5	protein_coding	FIP1 like 1 (S. cerevisiae)
chr5	74717810;74725287	74725180;74731760	+	74717810	74731760	cassetteExon	0.5	100	100	ENSMUST00000080164.12	ENSMUSG00000029227.16	Fip1l1	chr5	protein_coding	FIP1 like 1 (S. cerevisiae)
chr5	74696954	74697462	+	74696422	74697462	A5SS	0.5	50	50	ENSMUST00000080164.12	ENSMUSG00000029227.16	Fip1l1	chr5	protein_coding	FIP1 like 1 (S. cerevisiae)
chr5	74696422	74697603	+	74697506	74697603	A5SS	0.5	50	50	ENSMUST00000135377.3	ENSMUSG00000029227.16	Fip1l1	chr5	protein_coding	FIP1 like 1 (S. cerevisiae)
chr5	74733246	74747664	+	74733246	74745707	3pMXE	0.5	50	50	ENSMUST00000121950.5	ENSMUSG00000029227.16	Fip1l1	chr5	protein_coding	FIP1 like 1 (S. cerevisiae)
chr5	74733246	74747664	+	74745733	74747664	5pMXE	0.5	50	50	ENSMUST00000200787.4	ENSMUSG00000029227.16	Fip1l1	chr5	protein_coding	FIP1 like 1 (S. cerevisiae)
chr5	74768566	74780635	-	74768566;74771472	74771338;74780635	ES	0.5	50	50	ENSMUST00000113531.9	ENSMUSG00000029228.16	Lnx1	chr5	protein_coding	ligand of numb-protein X 1
chr5	74820882	74838169	-	74820882;74821215	74820967;74838169	ES	0.33	50	50	ENSMUST00000113531.9	ENSMUSG00000029228.16	Lnx1	chr5	protein_coding	ligand of numb-protein X 1
chr5	74753634	74757897	-	74753637	74757897	A3SS	0.5	50	50	ENSMUST00000113531.9	ENSMUSG00000029228.16	Lnx1	chr5	protein_coding	ligand of numb-protein X 1
chr5	74784315	74788009	-	74784345	74788009	A3SS	0.5	50	50	ENSMUST00000113531.9	ENSMUSG00000029228.16	Lnx1	chr5	protein_coding	ligand of numb-protein X 1
chr5	74789022	74846057	-	74789022	74838169	5pMXE	0.33	50	50	ENSMUST00000039744.13	ENSMUSG00000029228.16	Lnx1	chr5	protein_coding	ligand of numb-protein X 1
chr5	74789022;74820882	74820763;74838169	-	74789022	74838169	cassetteExon	0.5	100	100	ENSMUST00000039744.13	ENSMUSG00000029228.16	Lnx1	chr5	protein_coding	ligand of numb-protein X 1
chr5	74789022;74821215	74820763;74838169	-	74789022	74838169	cassetteExon	0.5	100	100	ENSMUST00000039744.13	ENSMUSG00000029228.16	Lnx1	chr5	protein_coding	ligand of numb-protein X 1
chr5	74789022	74820763	-	74789022	74846057	A5SS	0.33	50	50	ENSMUST00000087161.10	ENSMUSG00000029228.16	Lnx1	chr5	protein_coding	ligand of numb-protein X 1
chr5	74863705	74872479	+	74863333	74872479	A5SS	0.5	50	50	ENSMUST00000156466.8	ENSMUSG00000085657.8	Gm15984	chr5	lncRNA	predicted gene 15984
chr5	75236784	75237627	+	75236998	75237627	A5SS	0.5	50	50	ENSMUST00000040477.4	ENSMUSG00000035946.8	Gsx2	chr5	protein_coding	GS homeobox 2
chr5	75314359	75322892	+	75313118	75322892	A5SS	0.2	50	50	ENSMUST00000202681.4	ENSMUSG00000029231.16	Pdgfra	chr5	protein_coding	platelet derived growth factor receptor, alpha polypeptide
chr5	75315902	75322892	+	75313118	75322892	A5SS	0.2	50	50	ENSMUST00000202681.4	ENSMUSG00000029231.16	Pdgfra	chr5	protein_coding	platelet derived growth factor receptor, alpha polypeptide
chr5	75317010	75322892	+	75313118	75322892	A5SS	0.2	50	50	ENSMUST00000202681.4	ENSMUSG00000029231.16	Pdgfra	chr5	protein_coding	platelet derived growth factor receptor, alpha polypeptide
chr5	75317679	75322892	+	75313118	75322892	A5SS	0.2	50	50	ENSMUST00000202681.4	ENSMUSG00000029231.16	Pdgfra	chr5	protein_coding	platelet derived growth factor receptor, alpha polypeptide
chr5	75315902	75322892	+	75314359	75322892	A5SS	0.2	50	50	ENSMUST00000201711.4	ENSMUSG00000029231.16	Pdgfra	chr5	protein_coding	platelet derived growth factor receptor, alpha polypeptide
chr5	75317010	75322892	+	75314359	75322892	A5SS	0.2	50	50	ENSMUST00000201711.4	ENSMUSG00000029231.16	Pdgfra	chr5	protein_coding	platelet derived growth factor receptor, alpha polypeptide
chr5	75317679	75322892	+	75314359	75322892	A5SS	0.2	50	50	ENSMUST00000201711.4	ENSMUSG00000029231.16	Pdgfra	chr5	protein_coding	platelet derived growth factor receptor, alpha polypeptide
chr5	75317010	75322892	+	75315902	75322892	A5SS	0.2	50	50	ENSMUST00000202161.4	ENSMUSG00000029231.16	Pdgfra	chr5	protein_coding	platelet derived growth factor receptor, alpha polypeptide
chr5	75317679	75322892	+	75315902	75322892	A5SS	0.2	50	50	ENSMUST00000202161.4	ENSMUSG00000029231.16	Pdgfra	chr5	protein_coding	platelet derived growth factor receptor, alpha polypeptide
chr5	75317679	75322892	+	75317010	75322892	A5SS	0.2	50	50	ENSMUST00000168162.5	ENSMUSG00000029231.16	Pdgfra	chr5	protein_coding	platelet derived growth factor receptor, alpha polypeptide
chr5	75799818	75801153	+	75799806	75801153	A5SS	0.5	50	50	ENSMUST00000144270.8	ENSMUSG00000005672.13	Kit	chr5	protein_coding	KIT proto-oncogene receptor tyrosine kinase
chr5	75895672	75896323	+	75888398	75896323	A5SS	0.5	50	50	ENSMUST00000200903.2	ENSMUSG00000106754.2	Gm43101	chr5	lncRNA	predicted gene 43101
chr5	76288395;76288715	76288627;76295533	+	76288395	76295533	cassetteExon	0.5	100	100	ENSMUST00000138699.8	ENSMUSG00000029233.16	Srd5a3	chr5	protein_coding	steroid 5 alpha-reductase 3
chr5	76288395;76288830	76288627;76295533	+	76288395	76295533	cassetteExon	0.5	100	100	ENSMUST00000138699.8	ENSMUSG00000029233.16	Srd5a3	chr5	protein_coding	steroid 5 alpha-reductase 3
chr5	76294607	76295533	+	76288395	76295533	A5SS	0.25	50	50	ENSMUST00000138699.8	ENSMUSG00000029233.16	Srd5a3	chr5	protein_coding	steroid 5 alpha-reductase 3
chr5	76295955	76297050	+	76295675	76297050	A5SS	0.5	50	50	ENSMUST00000138699.8	ENSMUSG00000029233.16	Srd5a3	chr5	protein_coding	steroid 5 alpha-reductase 3
chr5	76288395	76295533	+	76288395	76288627	3pMXE	0.5	50	50	ENSMUST00000149222.2	ENSMUSG00000029233.16	Srd5a3	chr5	protein_coding	steroid 5 alpha-reductase 3
chr5	76288395	76295533	+	76288715	76295533	5pMXE	0.25	50	50	ENSMUST00000152642.8	ENSMUSG00000029233.16	Srd5a3	chr5	protein_coding	steroid 5 alpha-reductase 3
chr5	76288830	76295533	+	76288715	76295533	A5SS	0.25	50	50	ENSMUST00000152642.8	ENSMUSG00000029233.16	Srd5a3	chr5	protein_coding	steroid 5 alpha-reductase 3
chr5	76294607	76295533	+	76288715	76295533	A5SS	0.25	50	50	ENSMUST00000152642.8	ENSMUSG00000029233.16	Srd5a3	chr5	protein_coding	steroid 5 alpha-reductase 3
chr5	76288395	76295533	+	76288830	76295533	5pMXE	0.25	50	50	ENSMUST00000127278.8	ENSMUSG00000029233.16	Srd5a3	chr5	protein_coding	steroid 5 alpha-reductase 3
chr5	76294607	76295533	+	76288830	76295533	A5SS	0.25	50	50	ENSMUST00000127278.8	ENSMUSG00000029233.16	Srd5a3	chr5	protein_coding	steroid 5 alpha-reductase 3
chr5	76332199	76344776	+	76332199	76347192	A3SS	0.5	50	50	ENSMUST00000031144.14	ENSMUSG00000029234.14	Tmem165	chr5	protein_coding	transmembrane protein 165
chr5	76352663	76353816	+	76352663	76355649	A3SS	0.5	50	50	ENSMUST00000031144.14	ENSMUSG00000029234.14	Tmem165	chr5	protein_coding	transmembrane protein 165
chr5	76377407	76378012	-	76377410	76378012	A3SS	0.5	50	50	ENSMUST00000202651.4	ENSMUSG00000029238.12	Clock	chr5	protein_coding	circadian locomotor output cycles kaput
chr5	76402288	76410522	-	76402310	76410522	A3SS	0.5	50	50	ENSMUST00000202651.4	ENSMUSG00000029238.12	Clock	chr5	protein_coding	circadian locomotor output cycles kaput
chr5	76451349	76452215	-	76451349	76452502	A5SS	0.5	50	50	ENSMUST00000202651.4	ENSMUSG00000029238.12	Clock	chr5	protein_coding	circadian locomotor output cycles kaput
chr5	76472243;76472960	76472840;76478860	-	76472243	76478860	cassetteExon	0.5	100	100	ENSMUST00000122213.8	ENSMUSG00000029235.15	Pdcl2	chr5	protein_coding	phosducin-like 2
chr5	76702052	76706851	+	76702052;76705710	76705666;76706851	ES	0.5	50	50	ENSMUST00000087133.11	ENSMUSG00000036435.14	Exoc1	chr5	protein_coding	exocyst complex component 1
chr5	76685704;76688614	76688594;76689898	+	76685704	76689898	cassetteExon	0.5	100	100	ENSMUST00000087133.11	ENSMUSG00000036435.14	Exoc1	chr5	protein_coding	exocyst complex component 1
chr5	76709367	76709452	+	76709367	76711077	A3SS	0.5	50	50	ENSMUST00000087133.11	ENSMUSG00000036435.14	Exoc1	chr5	protein_coding	exocyst complex component 1
chr5	76711260	76714774	+	76711260	76714804	A3SS	0.5	50	50	ENSMUST00000087133.11	ENSMUSG00000036435.14	Exoc1	chr5	protein_coding	exocyst complex component 1
chr5	76907578;76918163	76918082;76970313	+	76907578	76970313	cassetteExon	0.5	100	100	ENSMUST00000128112.8	ENSMUSG00000036377.20	Cracd	chr5	protein_coding	capping protein inhibiting regulator of actin
chr5	76806327	76907433	+	76805700	76907433	A5SS	0.33	50	50	ENSMUST00000128112.8	ENSMUSG00000036377.20	Cracd	chr5	protein_coding	capping protein inhibiting regulator of actin
chr5	76900272	76907433	+	76805700	76907433	A5SS	0.33	50	50	ENSMUST00000128112.8	ENSMUSG00000036377.20	Cracd	chr5	protein_coding	capping protein inhibiting regulator of actin
chr5	76958046	76970313	+	76907578	76970313	A5SS	0.33	50	50	ENSMUST00000128112.8	ENSMUSG00000036377.20	Cracd	chr5	protein_coding	capping protein inhibiting regulator of actin
chr5	76988520	76988635	+	76970484	76988635	A5SS	0.5	50	50	ENSMUST00000128112.8	ENSMUSG00000036377.20	Cracd	chr5	protein_coding	capping protein inhibiting regulator of actin
chr5	76918163	76935328	+	76918163	76970313	A3SS	0.5	50	50	ENSMUST00000238963.2	ENSMUSG00000036377.20	Cracd	chr5	protein_coding	capping protein inhibiting regulator of actin
chr5	76988770	76989579	+	76988770	76996664	A3SS	0.5	50	50	ENSMUST00000238963.2	ENSMUSG00000036377.20	Cracd	chr5	protein_coding	capping protein inhibiting regulator of actin
chr5	77015181	77016082	+	77015181	77018364	A3SS	0.5	50	50	ENSMUST00000238963.2	ENSMUSG00000036377.20	Cracd	chr5	protein_coding	capping protein inhibiting regulator of actin
chr5	76900272	76907433	+	76806327	76907433	A5SS	0.33	50	50	ENSMUST00000238963.2	ENSMUSG00000036377.20	Cracd	chr5	protein_coding	capping protein inhibiting regulator of actin
chr5	76958046	76970313	+	76918163	76970313	A5SS	0.33	50	50	ENSMUST00000238963.2	ENSMUSG00000036377.20	Cracd	chr5	protein_coding	capping protein inhibiting regulator of actin
chr5	77006992	77013847	+	77007001	77013847	A5SS	0.5	50	50	ENSMUST00000238963.2	ENSMUSG00000036377.20	Cracd	chr5	protein_coding	capping protein inhibiting regulator of actin
chr5	77017195	77018364	+	77015181	77018364	A5SS	0.5	50	50	ENSMUST00000238963.2	ENSMUSG00000036377.20	Cracd	chr5	protein_coding	capping protein inhibiting regulator of actin
chr5	77034169	77035877	-	77034169;77035207	77035035;77035877	ES	0.5	50	50	ENSMUST00000123682.8	ENSMUSG00000055923.17	Aasdh	chr5	protein_coding	aminoadipate-semialdehyde dehydrogenase
chr5	77039642	77044224	-	77039642;77042209	77042137;77044224	ES	0.5	50	50	ENSMUST00000123682.8	ENSMUSG00000055923.17	Aasdh	chr5	protein_coding	aminoadipate-semialdehyde dehydrogenase
chr5	77050032	77053270	-	77050032;77052227	77052056;77053270	ES	0.33	50	50	ENSMUST00000123682.8	ENSMUSG00000055923.17	Aasdh	chr5	protein_coding	aminoadipate-semialdehyde dehydrogenase
chr5	77052227;77052859	77052806;77053270	-	77052227	77053270	cassetteExon	0.5	100	100	ENSMUST00000123682.8	ENSMUSG00000055923.17	Aasdh	chr5	protein_coding	aminoadipate-semialdehyde dehydrogenase
chr5	77024269	77025374	-	77024525	77025374	A3SS&ES	0.5	50	50	ENSMUST00000123682.8	ENSMUSG00000055923.17	Aasdh	chr5	protein_coding	aminoadipate-semialdehyde dehydrogenase
chr5	77024269	77026251	-	77025505	77026251	A3SS&ES	0.5	50	50	ENSMUST00000123682.8	ENSMUSG00000055923.17	Aasdh	chr5	protein_coding	aminoadipate-semialdehyde dehydrogenase
chr5	77032048	77033894	-	77032048	77033977	A5SS	0.5	50	50	ENSMUST00000123682.8	ENSMUSG00000055923.17	Aasdh	chr5	protein_coding	aminoadipate-semialdehyde dehydrogenase
chr5	77050032	77052105	-	77050032	77052056	A5SS	0.33	50	50	ENSMUST00000123682.8	ENSMUSG00000055923.17	Aasdh	chr5	protein_coding	aminoadipate-semialdehyde dehydrogenase
chr5	77052227	77053118	-	77052227	77053270	A5SS	0.33	50	50	ENSMUST00000123682.8	ENSMUSG00000055923.17	Aasdh	chr5	protein_coding	aminoadipate-semialdehyde dehydrogenase
chr5	77024269	77025374	-	77024269	77024389	5pMXE	0.33	50	50	ENSMUST00000145022.2	ENSMUSG00000055923.17	Aasdh	chr5	protein_coding	aminoadipate-semialdehyde dehydrogenase
chr5	77024269	77026251	-	77024269	77024389	5pMXE	0.33	50	50	ENSMUST00000145022.2	ENSMUSG00000055923.17	Aasdh	chr5	protein_coding	aminoadipate-semialdehyde dehydrogenase
chr5	77024269	77026251	-	77024269;77025505	77025374;77026251	ES	0.5	50	50	ENSMUST00000120963.8	ENSMUSG00000055923.17	Aasdh	chr5	protein_coding	aminoadipate-semialdehyde dehydrogenase
chr5	77024269;77024525	77024389;77025374	-	77024269	77025374	cassetteExon	0.5	100	100	ENSMUST00000120963.8	ENSMUSG00000055923.17	Aasdh	chr5	protein_coding	aminoadipate-semialdehyde dehydrogenase
chr5	77050032;77052227	77052105;77053270	-	77050032	77053270	cassetteExon	0.5	100	100	ENSMUST00000135697.8	ENSMUSG00000055923.17	Aasdh	chr5	protein_coding	aminoadipate-semialdehyde dehydrogenase
chr5	77052859	77053270	-	77050032	77053270	A3SS	0.33	50	50	ENSMUST00000135697.8	ENSMUSG00000055923.17	Aasdh	chr5	protein_coding	aminoadipate-semialdehyde dehydrogenase
chr5	77052227	77053118	-	77052227	77052806	A5SS&ES	0.33	50	50	ENSMUST00000146570.8	ENSMUSG00000055923.17	Aasdh	chr5	protein_coding	aminoadipate-semialdehyde dehydrogenase
chr5	77052227	77053270	-	77052227	77052806	A5SS	0.33	50	50	ENSMUST00000134805.2	ENSMUSG00000055923.17	Aasdh	chr5	protein_coding	aminoadipate-semialdehyde dehydrogenase
chr5	77074704	77098804	-	77074704;77097443	77097288;77098804	ES	0.5	50	50	ENSMUST00000155272.8	ENSMUSG00000029246.15	Ppat	chr5	protein_coding	phosphoribosyl pyrophosphate amidotransferase
chr5	77104693	77107162	+	77104590	77107162	A5SS	0.5	50	50	ENSMUST00000031160.16	ENSMUSG00000029247.18	Paics	chr5	protein_coding	phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase
chr5	77099248	77099616	+	77099515	77099616	A5SS	0.33	50	50	ENSMUST00000120912.8	ENSMUSG00000029247.18	Paics	chr5	protein_coding	phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase
chr5	77099349	77099616	+	77099515	77099616	A5SS	0.33	50	50	ENSMUST00000120912.8	ENSMUSG00000029247.18	Paics	chr5	protein_coding	phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase
chr5	77099349	77099616	+	77099248	77099616	A5SS	0.33	50	50	ENSMUST00000117536.8	ENSMUSG00000029247.18	Paics	chr5	protein_coding	phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase
chr5	77145429;77145944	77145863;77146039	+	77145429	77146039	cassetteExon	0.5	100	100	ENSMUST00000101087.10	ENSMUSG00000036323.15	Srp72	chr5	protein_coding	signal recognition particle 72
chr5	77130113;77132238	77131965;77135714	+	77130113	77135714	cassetteExon	0.5	100	100	ENSMUST00000120550.2	ENSMUSG00000036323.15	Srp72	chr5	protein_coding	signal recognition particle 72
chr5	77155254	77158259	+	77155254	77157308	3pMXE	0.5	50	50	ENSMUST00000071199.9	ENSMUSG00000063820.12	Arl9	chr5	protein_coding	ADP-ribosylation factor-like 9
chr5	77185198	77189943	+	77164485	77189943	A5SS	0.5	50	50	ENSMUST00000031161.11	ENSMUSG00000029248.15	Thegl	chr5	protein_coding	theg spermatid protein like
chr5	77242869	77262694	-	77242869	77242998	5pMXE	0.5	50	50	ENSMUST00000113453.9	ENSMUSG00000059325.15	Hopx	chr5	protein_coding	HOP homeobox
chr5	77354885	77357580	-	77354881	77357580	A3SS	0.5	50	50	ENSMUST00000120429.8	ENSMUSG00000053030.12	Spink2	chr5	protein_coding	serine peptidase inhibitor, Kazal type 2
chr5	77357641	77358896	-	77357641	77359179	A5SS	0.5	50	50	ENSMUST00000120429.8	ENSMUSG00000053030.12	Spink2	chr5	protein_coding	serine peptidase inhibitor, Kazal type 2
chr5	77414260	77415779	+	77413635	77415779	A5SS	0.5	50	50	ENSMUST00000080359.12	ENSMUSG00000029249.16	Rest	chr5	protein_coding	RE1-silencing transcription factor
chr5	77451672	77452033	-	77447621	77452033	A3SS	0.5	50	50	ENSMUST00000047860.9	ENSMUSG00000036285.11	Noa1	chr5	protein_coding	nitric oxide associated 1
chr5	77453552	77454121	-	77452164	77454121	A3SS	0.5	50	50	ENSMUST00000047860.9	ENSMUSG00000036285.11	Noa1	chr5	protein_coding	nitric oxide associated 1
chr5	77503518;77549426	77549334;77555387	-	77503518	77555387	cassetteExon	0.5	100	100	ENSMUST00000046746.10	ENSMUSG00000036256.14	Igfbp7	chr5	protein_coding	insulin-like growth factor binding protein 7
chr5	81169192	81345413	+	81169192;81215568	81215538;81345413	ES	0.5	50	50	ENSMUST00000147226.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81457926	81535622	+	81457926;81477807	81477604;81535622	ES	0.5	50	50	ENSMUST00000147226.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81477807	81493750	+	81477807	81535622	A3SS	0.5	50	50	ENSMUST00000147226.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81169662	81215538	+	81169192	81215538	A5SS	0.25	50	50	ENSMUST00000147226.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81169701	81215538	+	81169192	81215538	A5SS	0.25	50	50	ENSMUST00000147226.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81170029	81215538	+	81169192	81215538	A5SS	0.25	50	50	ENSMUST00000147226.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81613151	81659831	+	81613151;81657585	81657571;81659831	ES	0.5	50	50	ENSMUST00000132375.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81808294	81836356	+	81808294;81811271	81811233;81836356	ES	0.5	50	50	ENSMUST00000132375.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81888993	81908474	+	81888993;81905859	81905833;81908474	ES	0.5	50	50	ENSMUST00000132375.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81919527	81972763	+	81919527	81942111	3pMXE	0.2	50	50	ENSMUST00000132375.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81457926;81535835	81535622;81613042	+	81457926	81613042	cassetteExon	0.5	100	100	ENSMUST00000132375.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81919527;81922278	81922240;81942111	+	81919527	81942111	cassetteExon	0.5	100	100	ENSMUST00000132375.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81919527;81935411	81935283;81942111	+	81919527	81942111	cassetteExon	0.5	100	100	ENSMUST00000132375.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81919527;81940225	81940208;81942111	+	81919527	81942111	cassetteExon	0.5	100	100	ENSMUST00000132375.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81919527;81940259	81940208;81942111	+	81919527	81942111	cassetteExon	0.5	100	100	ENSMUST00000132375.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81457926	81477604	+	81457926	81613042	A3SS	0.25	50	50	ENSMUST00000132375.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81613151	81640270	+	81613151	81657571	A3SS	0.33	50	50	ENSMUST00000132375.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81793903	81794257	+	81708790	81794257	A5SS	0.5	50	50	ENSMUST00000132375.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81613151	81640270	+	81613151	81659831	A3SS	0.33	50	50	ENSMUST00000149280.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81169192	81345413	+	81169192	81215538	3pMXE	0.5	50	50	ENSMUST00000148923.2	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81919527	81935283	+	81919527;81922278	81922240;81935283	ES	0.5	50	50	ENSMUST00000117253.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81935411	81942111	+	81935411	81940208	3pMXE	0.5	50	50	ENSMUST00000117253.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81919527;81922278	81922240;81942111	+	81919527;81940259	81940208;81942111	MXE	0.5	100	100	ENSMUST00000120128.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81919527;81935411	81935283;81940208	+	81919527	81940208	cassetteExon	0.5	100	100	ENSMUST00000120128.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81919527;81935411	81935283;81942111	+	81919527;81940259	81940208;81942111	MXE	0.5	100	100	ENSMUST00000120128.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81940225	81942111	+	81940259	81942111	A5SS	0.2	50	50	ENSMUST00000120128.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81919527;81922278	81922240;81942111	+	81919527;81940225	81940208;81942111	MXE	0.5	100	100	ENSMUST00000121707.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81919527;81935411	81935283;81942111	+	81919527;81940225	81940208;81942111	MXE	0.5	100	100	ENSMUST00000121707.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81169662	81215538	+	81169701	81215538	A5SS	0.25	50	50	ENSMUST00000121707.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81170029	81215538	+	81169701	81215538	A5SS	0.25	50	50	ENSMUST00000121707.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81169662	81215538	+	81170029	81215538	A5SS	0.25	50	50	ENSMUST00000132634.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81457926	81477604	+	81457926	81886874	A3SS	0.25	50	50	ENSMUST00000153264.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81457926	81535622	+	81457926	81886874	A3SS	0.25	50	50	ENSMUST00000153264.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81457926	81613042	+	81457926	81886874	A3SS	0.25	50	50	ENSMUST00000153264.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81874736	81886874	+	81457926	81886874	A5SS	0.5	50	50	ENSMUST00000153264.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81935411	81942111	+	81935411;81940259	81940208;81942111	ES	0.2	50	50	ENSMUST00000120144.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81919527;81922278	81922240;81942111	+	81919527;81940259	81935283;81942111	MXE	0.5	100	100	ENSMUST00000120144.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81919527;81922278	81922240;81942111	+	81919527;81935411	81935283;81942111	MXE	0.5	100	100	ENSMUST00000120673.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81935411;81940225	81940208;81942111	+	81935411	81942111	cassetteExon	0.5	100	100	ENSMUST00000120673.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81922278;81935411	81935283;81942111	+	81922278	81942111	cassetteExon	0.5	100	100	ENSMUST00000119788.8	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81919527	81922240	+	81919527	81972763	A3SS	0.2	50	50	ENSMUST00000148830.2	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81919527	81935283	+	81919527	81972763	A3SS	0.2	50	50	ENSMUST00000148830.2	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	81919527	81940208	+	81919527	81972763	A3SS	0.2	50	50	ENSMUST00000148830.2	ENSMUSG00000037605.17	Adgrl3	chr5	protein_coding	adhesion G protein-coupled receptor L3
chr5	82270961	82271058	-	82270961	82272453	A5SS	0.25	50	50	ENSMUST00000188072.2	ENSMUSG00000099863.2	1700031L13Rik	chr5	protein_coding	RIKEN cDNA 1700031L13 gene
chr5	82270961	82271139	-	82270961	82272453	A5SS	0.25	50	50	ENSMUST00000188072.2	ENSMUSG00000099863.2	1700031L13Rik	chr5	protein_coding	RIKEN cDNA 1700031L13 gene
chr5	82270961	82272443	-	82270961	82272453	A5SS	0.25	50	50	ENSMUST00000188072.2	ENSMUSG00000099863.2	1700031L13Rik	chr5	protein_coding	RIKEN cDNA 1700031L13 gene
chr5	82270961	82271058	-	82270961	82272443	A5SS	0.25	50	50	ENSMUST00000185410.2	ENSMUSG00000099863.2	1700031L13Rik	chr5	protein_coding	RIKEN cDNA 1700031L13 gene
chr5	82270961	82271139	-	82270961	82272443	A5SS	0.25	50	50	ENSMUST00000185410.2	ENSMUSG00000099863.2	1700031L13Rik	chr5	protein_coding	RIKEN cDNA 1700031L13 gene
chr5	82270961	82271058	-	82270961	82271139	A5SS	0.25	50	50	ENSMUST00000185607.2	ENSMUSG00000099863.2	1700031L13Rik	chr5	protein_coding	RIKEN cDNA 1700031L13 gene
chr5	83457078	83461131	-	83457153	83461131	A3SS	0.5	50	50	ENSMUST00000053543.11	ENSMUSG00000049537.11	Tecrl	chr5	protein_coding	trans-2,3-enoyl-CoA reductase-like
chr5	84255915	84290137	-	84255915;84265485	84265420;84290137	ES	0.5	50	50	ENSMUST00000053733.15	ENSMUSG00000029245.17	Epha5	chr5	protein_coding	Eph receptor A5
chr5	84304395;84385413	84385258;84479087	-	84304395	84479087	cassetteExon	0.5	100	100	ENSMUST00000053733.15	ENSMUSG00000029245.17	Epha5	chr5	protein_coding	Eph receptor A5
chr5	84304395;84385415	84385258;84479087	-	84304395	84479087	cassetteExon	0.5	100	100	ENSMUST00000053733.15	ENSMUSG00000029245.17	Epha5	chr5	protein_coding	Eph receptor A5
chr5	84290239	84298201	-	84290242	84298201	A3SS	0.5	50	50	ENSMUST00000053733.15	ENSMUSG00000029245.17	Epha5	chr5	protein_coding	Eph receptor A5
chr5	84304395	84381442	-	84304395	84479087	A5SS	0.33	50	50	ENSMUST00000053733.15	ENSMUSG00000029245.17	Epha5	chr5	protein_coding	Eph receptor A5
chr5	84304395	84385258	-	84304395;84381777	84381442;84385258	ES	0.5	50	50	ENSMUST00000113403.8	ENSMUSG00000029245.17	Epha5	chr5	protein_coding	Eph receptor A5
chr5	84385415	84479087	-	84385413	84479087	A3SS	0.33	50	50	ENSMUST00000113403.8	ENSMUSG00000029245.17	Epha5	chr5	protein_coding	Eph receptor A5
chr5	84304395	84479087	-	84385415	84479087	3pMXE	0.33	50	50	ENSMUST00000155469.8	ENSMUSG00000029245.17	Epha5	chr5	protein_coding	Eph receptor A5
chr5	86225919	86232248	+	86225919;86229139	86229026;86232248	ES	0.5	50	50	ENSMUST00000198435.5	ENSMUSG00000029254.17	Stap1	chr5	protein_coding	signal transducing adaptor family member 1
chr5	86232304	86232396	+	86232304	86234509	A3SS	0.5	50	50	ENSMUST00000198435.5	ENSMUSG00000029254.17	Stap1	chr5	protein_coding	signal transducing adaptor family member 1
chr5	86318476	86320266	-	86318476	86320527	A5SS	0.5	50	50	ENSMUST00000039373.14	ENSMUSG00000035898.14	Uba6	chr5	protein_coding	ubiquitin-like modifier activating enzyme 6
chr5	86330279;86333346	86333130;86345163	-	86330279	86345163	cassetteExon	0.5	100	100	ENSMUST00000113372.2	ENSMUSG00000029255.9	Gnrhr	chr5	protein_coding	gonadotropin releasing hormone receptor
chr5	86330279	86345163	-	86333346	86345163	3pMXE	0.5	50	50	ENSMUST00000094654.3	ENSMUSG00000029255.9	Gnrhr	chr5	protein_coding	gonadotropin releasing hormone receptor
chr5	86387357	86404154	-	86387357;86390862	86390824;86404154	ES	0.5	50	50	ENSMUST00000059424.10	ENSMUSG00000061184.9	Tmprss11c	chr5	protein_coding	transmembrane protease, serine 11c
chr5	86640149	86644365	-	86640149;86640705	86640667;86644365	ES	0.5	50	50	ENSMUST00000134179.8	ENSMUSG00000079451.10	Tmprss11g	chr5	protein_coding	transmembrane protease, serine 11g
chr5	86713854	86739269	-	86704905	86739269	A3SS	0.5	50	50	ENSMUST00000116553.9	ENSMUSG00000048764.17	Tmprss11f	chr5	protein_coding	transmembrane protease, serine 11f
chr5	86876859	86916188	+	86876859	86905132	3pMXE	0.5	50	50	ENSMUST00000161985.2	ENSMUSG00000089851.2	Gm16579	chr5	lncRNA	predicted gene 16579
chr5	86952450	86963488	+	86916340	86963488	A5SS	0.33	50	50	ENSMUST00000198859.2	ENSMUSG00000105704.2	Gm43055	chr5	lncRNA	predicted gene 43055
chr5	86957199	86963488	+	86916340	86963488	A5SS	0.33	50	50	ENSMUST00000198859.2	ENSMUSG00000105704.2	Gm43055	chr5	lncRNA	predicted gene 43055
chr5	86952450;86957199	86957164;86963488	+	86952450	86963488	cassetteExon	0.5	100	100	ENSMUST00000119339.8	ENSMUSG00000035851.15	Ythdc1	chr5	protein_coding	YTH domain containing 1
chr5	86968034;86968545	86968492;86969111	+	86968034	86969111	cassetteExon	0.5	100	100	ENSMUST00000119339.8	ENSMUSG00000035851.15	Ythdc1	chr5	protein_coding	YTH domain containing 1
chr5	86979559	86979632	+	86979559	86979656	A3SS	0.5	50	50	ENSMUST00000119339.8	ENSMUSG00000035851.15	Ythdc1	chr5	protein_coding	YTH domain containing 1
chr5	86977338	86978413	+	86975980	86978413	A5SS	0.5	50	50	ENSMUST00000119339.8	ENSMUSG00000035851.15	Ythdc1	chr5	protein_coding	YTH domain containing 1
chr5	87239705	87240084	-	87239705	87240303	A5SS	0.5	50	50	ENSMUST00000145617.8	ENSMUSG00000070704.11	Ugt2b36	chr5	protein_coding	UDP glucuronosyltransferase 2 family, polypeptide B36
chr5	87610835	87613267	-	87610835;87612041	87611910;87613267	ES	0.5	50	50	ENSMUST00000079811.13	ENSMUSG00000029268.15	Ugt2a2	chr5	protein_coding	UDP glucuronosyltransferase 2 family, polypeptide A2
chr5	87613415	87630093	-	87613415;87622991	87622249;87630093	ES	0.5	50	50	ENSMUST00000079811.13	ENSMUSG00000029268.15	Ugt2a2	chr5	protein_coding	UDP glucuronosyltransferase 2 family, polypeptide A2
chr5	87613415	87633888	-	87613415	87630093	5pMXE	0.33	50	50	ENSMUST00000144144.3	ENSMUSG00000029268.15	Ugt2a2	chr5	protein_coding	UDP glucuronosyltransferase 2 family, polypeptide A2
chr5	87622991	87630093	-	87613415	87630093	A3SS	0.5	50	50	ENSMUST00000144144.3	ENSMUSG00000029268.15	Ugt2a2	chr5	protein_coding	UDP glucuronosyltransferase 2 family, polypeptide A2
chr5	87613415	87622249	-	87613415	87630093	A5SS	0.33	50	50	ENSMUST00000144144.3	ENSMUSG00000029268.15	Ugt2a2	chr5	protein_coding	UDP glucuronosyltransferase 2 family, polypeptide A2
chr5	87622878	87633888	-	87613415	87633888	A3SS	0.5	50	50	ENSMUST00000147854.6	ENSMUSG00000106677.2	Ugt2a1	chr5	protein_coding	UDP glucuronosyltransferase 2 family, polypeptide A1
chr5	87613415	87622249	-	87613415	87633888	A5SS	0.33	50	50	ENSMUST00000147854.6	ENSMUSG00000106677.2	Ugt2a1	chr5	protein_coding	UDP glucuronosyltransferase 2 family, polypeptide A1
chr5	87613415	87633888	-	87613415;87622878	87622249;87633888	ES	0.5	50	50	ENSMUST00000201519.2	ENSMUSG00000107180.2	Gm43638	chr5	protein_coding	predicted gene 43638
chr5	87682955	87683956	-	87682955	87685964	A5SS	0.5	50	50	ENSMUST00000031199.11	ENSMUSG00000029269.12	Sult1b1	chr5	protein_coding	sulfotransferase family 1B, member 1
chr5	87707746	87708012	-	87707746	87711729	A5SS	0.5	50	50	ENSMUST00000113314.3	ENSMUSG00000029273.11	Sult1d1	chr5	protein_coding	sulfotransferase family 1D, member 1
chr5	87814883	87815094	+	87814115	87815094	A5SS	0.5	50	50	ENSMUST00000200567.5	ENSMUSG00000070702.10	Csn1s1	chr5	protein_coding	casein alpha s1
chr5	87816185	87816827	+	87816185	87816866	A3SS	0.5	50	50	ENSMUST00000200344.5	ENSMUSG00000070702.10	Csn1s1	chr5	protein_coding	casein alpha s1
chr5	87818777	87818862	+	87818777	87818865	A3SS	0.5	50	50	ENSMUST00000200344.5	ENSMUSG00000070702.10	Csn1s1	chr5	protein_coding	casein alpha s1
chr5	87827934	87828679	+	87827934	87828736	A3SS	0.5	50	50	ENSMUST00000197631.5	ENSMUSG00000070702.10	Csn1s1	chr5	protein_coding	casein alpha s1
chr5	87826931	87828736	+	87827934	87828736	A5SS&ES	0.5	50	50	ENSMUST00000197631.5	ENSMUSG00000070702.10	Csn1s1	chr5	protein_coding	casein alpha s1
chr5	87844999	87845887	-	87844999;87845139	87845116;87845887	ES	0.33	50	50	ENSMUST00000197422.5	ENSMUSG00000063157.10	Csn2	chr5	protein_coding	casein beta
chr5	87843928	87844013	-	87843931	87844013	A3SS	0.5	50	50	ENSMUST00000197422.5	ENSMUSG00000063157.10	Csn2	chr5	protein_coding	casein beta
chr5	87844036	87844175	-	87844036	87844979	A5SS	0.33	50	50	ENSMUST00000197422.5	ENSMUSG00000063157.10	Csn2	chr5	protein_coding	casein beta
chr5	87845949	87847223	-	87845949	87847238	A5SS	0.5	50	50	ENSMUST00000197422.5	ENSMUSG00000063157.10	Csn2	chr5	protein_coding	casein beta
chr5	87844036;87844999	87844979;87845887	-	87844036	87845887	cassetteExon	0.5	100	100	ENSMUST00000196869.5	ENSMUSG00000063157.10	Csn2	chr5	protein_coding	casein beta
chr5	87844036;87845139	87844979;87845887	-	87844036	87845887	cassetteExon	0.5	100	100	ENSMUST00000196869.5	ENSMUSG00000063157.10	Csn2	chr5	protein_coding	casein beta
chr5	87844036	87844175	-	87844036	87845887	A5SS	0.33	50	50	ENSMUST00000196869.5	ENSMUSG00000063157.10	Csn2	chr5	protein_coding	casein beta
chr5	87926842;87927885	87927862;87927968	+	87926842	87927968	cassetteExon	0.5	100	100	ENSMUST00000200322.5	ENSMUSG00000061937.8	Csn1s2a	chr5	protein_coding	casein alpha s2-like A
chr5	87926842;87927885	87927862;87929622	+	87926842;87928012	87927968;87929622	MXE	0.5	100	100	ENSMUST00000200322.5	ENSMUSG00000061937.8	Csn1s2a	chr5	protein_coding	casein alpha s2-like A
chr5	87925942	87926034	+	87925942	87926031	A3SS	0.5	50	50	ENSMUST00000200322.5	ENSMUSG00000061937.8	Csn1s2a	chr5	protein_coding	casein alpha s2-like A
chr5	87927885	87929622	+	87927885;87928012	87927968;87929622	ES	0.5	50	50	ENSMUST00000076379.8	ENSMUSG00000061937.8	Csn1s2a	chr5	protein_coding	casein alpha s2-like A
chr5	87927885	87929622	+	87927885	87927968	3pMXE	0.5	50	50	ENSMUST00000200210.5	ENSMUSG00000061937.8	Csn1s2a	chr5	protein_coding	casein alpha s2-like A
chr5	87926842	87927968	+	87926842	87927862	A3SS	0.5	50	50	ENSMUST00000197544.2	ENSMUSG00000061937.8	Csn1s2a	chr5	protein_coding	casein alpha s2-like A
chr5	87926842	87927968	+	87927885	87927968	5pMXE	0.5	50	50	ENSMUST00000200200.2	ENSMUSG00000061937.8	Csn1s2a	chr5	protein_coding	casein alpha s2-like A
chr5	87961841	87964500	+	87961841;87962985	87962953;87964500	ES	0.5	50	50	ENSMUST00000072539.12	ENSMUSG00000061388.12	Csn1s2b	chr5	protein_coding	casein alpha s2-like B
chr5	87964523	87964850	+	87964523	87966802	A3SS	0.5	50	50	ENSMUST00000072539.12	ENSMUSG00000061388.12	Csn1s2b	chr5	protein_coding	casein alpha s2-like B
chr5	87966954	87968810	+	87966969	87968810	A5SS	0.5	50	50	ENSMUST00000072539.12	ENSMUSG00000061388.12	Csn1s2b	chr5	protein_coding	casein alpha s2-like B
chr5	87983592	87989117	+	87983592;87985490	87985467;87989117	ES	0.5	50	50	ENSMUST00000101056.8	ENSMUSG00000002240.13	Prr27	chr5	protein_coding	proline rich 27
chr5	88078074	88079157	+	88078074	88080218	A3SS	0.5	50	50	ENSMUST00000001667.13	ENSMUSG00000001622.16	Csn3	chr5	protein_coding	casein kappa
chr5	88118571	88139414	+	88118571	88119299	3pMXE	0.5	50	50	ENSMUST00000007601.4	ENSMUSG00000007457.4	2310003L06Rik	chr5	protein_coding	RIKEN cDNA 2310003L06 gene
chr5	88150473	88152575	+	88139483	88152575	A5SS	0.5	50	50	ENSMUST00000187738.2	ENSMUSG00000100704.2	Gm28434	chr5	protein_coding	predicted gene 28434
chr5	88236103	88256378	+	88236103	88246042	3pMXE	0.33	50	50	ENSMUST00000199635.5	ENSMUSG00000029281.14	Smr2	chr5	protein_coding	submaxillary gland androgen regulated protein 2
chr5	88236103	88236676	+	88236103	88246042	A3SS	0.33	50	50	ENSMUST00000199635.5	ENSMUSG00000029281.14	Smr2	chr5	protein_coding	submaxillary gland androgen regulated protein 2
chr5	88234488;88253241	88253175;88256378	+	88234488;88236103	88236037;88256378	MXE	0.5	100	100	ENSMUST00000087043.8	ENSMUSG00000029281.14	Smr2	chr5	protein_coding	submaxillary gland androgen regulated protein 2
chr5	88236103	88236676	+	88236103	88256378	A3SS	0.33	50	50	ENSMUST00000087043.8	ENSMUSG00000029281.14	Smr2	chr5	protein_coding	submaxillary gland androgen regulated protein 2
chr5	88236745	88253175	+	88234488	88253175	A5SS	0.5	50	50	ENSMUST00000196477.5	ENSMUSG00000029281.14	Smr2	chr5	protein_coding	submaxillary gland androgen regulated protein 2
chr5	88609602	88611131	+	88609602	88611086	A3SS	0.5	50	50	ENSMUST00000198265.5	ENSMUSG00000029288.12	Ambn	chr5	protein_coding	ameloblastin
chr5	88786937	88790788	+	88786937	88788448	3pMXE	0.5	50	50	ENSMUST00000196894.5	ENSMUSG00000029291.12	Rufy3	chr5	protein_coding	RUN and FYVE domain containing 3
chr5	88732176	88762800	+	88713335	88762800	A5SS	0.33	50	50	ENSMUST00000196894.5	ENSMUSG00000029291.12	Rufy3	chr5	protein_coding	RUN and FYVE domain containing 3
chr5	88746348	88762800	+	88713335	88762800	A5SS	0.33	50	50	ENSMUST00000196894.5	ENSMUSG00000029291.12	Rufy3	chr5	protein_coding	RUN and FYVE domain containing 3
chr5	88732176	88762800	+	88732176;88746348	88746295;88762800	ES	0.5	50	50	ENSMUST00000199312.5	ENSMUSG00000029291.12	Rufy3	chr5	protein_coding	RUN and FYVE domain containing 3
chr5	88821708	88822880	-	88821708	88823617	A5SS	0.16	50	50	ENSMUST00000078945.12	ENSMUSG00000044221.15	Grsf1	chr5	protein_coding	G-rich RNA sequence binding factor 1
chr5	88821708	88822952	-	88821708	88823617	A5SS	0.16	50	50	ENSMUST00000078945.12	ENSMUSG00000044221.15	Grsf1	chr5	protein_coding	G-rich RNA sequence binding factor 1
chr5	88821708	88822979	-	88821708	88823617	A5SS	0.16	50	50	ENSMUST00000078945.12	ENSMUSG00000044221.15	Grsf1	chr5	protein_coding	G-rich RNA sequence binding factor 1
chr5	88821708	88823354	-	88821708	88823617	A5SS	0.16	50	50	ENSMUST00000078945.12	ENSMUSG00000044221.15	Grsf1	chr5	protein_coding	G-rich RNA sequence binding factor 1
chr5	88821708	88823405	-	88821708	88823617	A5SS	0.16	50	50	ENSMUST00000078945.12	ENSMUSG00000044221.15	Grsf1	chr5	protein_coding	G-rich RNA sequence binding factor 1
chr5	88821708	88822880	-	88821708	88823354	A5SS	0.16	50	50	ENSMUST00000113234.8	ENSMUSG00000044221.15	Grsf1	chr5	protein_coding	G-rich RNA sequence binding factor 1
chr5	88821708	88822952	-	88821708	88823354	A5SS	0.16	50	50	ENSMUST00000113234.8	ENSMUSG00000044221.15	Grsf1	chr5	protein_coding	G-rich RNA sequence binding factor 1
chr5	88821708	88822979	-	88821708	88823354	A5SS	0.16	50	50	ENSMUST00000113234.8	ENSMUSG00000044221.15	Grsf1	chr5	protein_coding	G-rich RNA sequence binding factor 1
chr5	88821708	88823405	-	88821708	88823354	A5SS	0.16	50	50	ENSMUST00000113234.8	ENSMUSG00000044221.15	Grsf1	chr5	protein_coding	G-rich RNA sequence binding factor 1
chr5	88821708	88822880	-	88821708	88823405	A5SS	0.16	50	50	ENSMUST00000153565.8	ENSMUSG00000044221.15	Grsf1	chr5	protein_coding	G-rich RNA sequence binding factor 1
chr5	88821708	88822952	-	88821708	88823405	A5SS	0.16	50	50	ENSMUST00000153565.8	ENSMUSG00000044221.15	Grsf1	chr5	protein_coding	G-rich RNA sequence binding factor 1
chr5	88821708	88822979	-	88821708	88823405	A5SS	0.16	50	50	ENSMUST00000153565.8	ENSMUSG00000044221.15	Grsf1	chr5	protein_coding	G-rich RNA sequence binding factor 1
chr5	88821708	88822880	-	88821708	88822979	A5SS	0.16	50	50	ENSMUST00000133532.8	ENSMUSG00000044221.15	Grsf1	chr5	protein_coding	G-rich RNA sequence binding factor 1
chr5	88821708	88822952	-	88821708	88822979	A5SS	0.16	50	50	ENSMUST00000133532.8	ENSMUSG00000044221.15	Grsf1	chr5	protein_coding	G-rich RNA sequence binding factor 1
chr5	88821708	88822880	-	88821708	88822952	A5SS	0.16	50	50	ENSMUST00000150438.2	ENSMUSG00000044221.15	Grsf1	chr5	protein_coding	G-rich RNA sequence binding factor 1
chr5	88891329	88892916	+	88891329	88892901	A3SS	0.5	50	50	ENSMUST00000113229.8	ENSMUSG00000006262.16	Mob1b	chr5	protein_coding	MOB kinase activator 1B
chr5	89194251	89232501	+	89194251;89205903	89205808;89232501	ES	0.33	50	50	ENSMUST00000239214.2	ENSMUSG00000060961.17	Slc4a4	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 4
chr5	89376846	89382656	+	89376846;89380719	89380623;89382656	ES	0.5	50	50	ENSMUST00000239214.2	ENSMUSG00000060961.17	Slc4a4	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 4
chr5	89035183	89035721	+	89035183	89082608	A3SS	0.5	50	50	ENSMUST00000239214.2	ENSMUSG00000060961.17	Slc4a4	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 4
chr5	89186470	89188217	+	89186470	89194072	A3SS	0.5	50	50	ENSMUST00000239214.2	ENSMUSG00000060961.17	Slc4a4	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 4
chr5	89082517	89082608	+	89035183	89082608	A5SS	0.5	50	50	ENSMUST00000239214.2	ENSMUSG00000060961.17	Slc4a4	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 4
chr5	89194224	89232501	+	89205903	89232501	A5SS&ES	0.33	50	50	ENSMUST00000239214.2	ENSMUSG00000060961.17	Slc4a4	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 4
chr5	89194224	89232501	+	89194251	89232501	A5SS	0.33	50	50	ENSMUST00000148750.8	ENSMUSG00000060961.17	Slc4a4	chr5	protein_coding	solute carrier family 4 (anion exchanger), member 4
chr5	89569787	89569917	-	89565547	89569917	A3SS	0.5	50	50	ENSMUST00000049209.13	ENSMUSG00000035540.13	Gc	chr5	protein_coding	vitamin D binding protein
chr5	89841061;89843945	89843862;89846063	-	89841061;89842689	89842609;89846063	MXE	0.5	100	100	ENSMUST00000061427.10	ENSMUSG00000043635.13	Adamts3	chr5	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3
chr5	89982973	90009158	-	89923300	90009158	A3SS	0.5	50	50	ENSMUST00000061427.10	ENSMUSG00000043635.13	Adamts3	chr5	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3
chr5	90029421	90029879	-	90029421	90030681	A5SS	0.5	50	50	ENSMUST00000061427.10	ENSMUSG00000043635.13	Adamts3	chr5	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3
chr5	90366892	90367219	-	90366895	90367219	A3SS	0.5	50	50	ENSMUST00000118816.6	ENSMUSG00000035505.15	Cox18	chr5	protein_coding	cytochrome c oxidase assembly protein 18
chr5	90370194	90371475	-	90370190	90371475	A3SS	0.5	50	50	ENSMUST00000118816.6	ENSMUSG00000035505.15	Cox18	chr5	protein_coding	cytochrome c oxidase assembly protein 18
chr5	90363034	90363295	-	90363034	90365376	A5SS	0.5	50	50	ENSMUST00000118816.6	ENSMUSG00000035505.15	Cox18	chr5	protein_coding	cytochrome c oxidase assembly protein 18
chr5	90426250	90432900	-	90426250;90431462	90430710;90432900	ES	0.5	50	50	ENSMUST00000014421.15	ENSMUSG00000055204.16	Ankrd17	chr5	protein_coding	ankyrin repeat domain 17
chr5	90426247	90430710	-	90426250	90430710	A3SS	0.5	50	50	ENSMUST00000014421.15	ENSMUSG00000055204.16	Ankrd17	chr5	protein_coding	ankyrin repeat domain 17
chr5	90451924	90487508	-	90451924	90513526	A5SS	0.5	50	50	ENSMUST00000014421.15	ENSMUSG00000055204.16	Ankrd17	chr5	protein_coding	ankyrin repeat domain 17
chr5	90426250	90432900	-	90431462	90432900	A3SS&ES	0.5	50	50	ENSMUST00000168058.7	ENSMUSG00000055204.16	Ankrd17	chr5	protein_coding	ankyrin repeat domain 17
chr5	90426250	90430710	-	90426250	90432900	A5SS	0.5	50	50	ENSMUST00000081914.13	ENSMUSG00000055204.16	Ankrd17	chr5	protein_coding	ankyrin repeat domain 17
chr5	90610485	90610559	+	90609637	90610559	A5SS	0.5	50	50	ENSMUST00000031314.10	ENSMUSG00000029368.11	Alb	chr5	protein_coding	albumin
chr5	90611945	90622426	+	90620543	90622426	A5SS&ES	0.5	50	50	ENSMUST00000031314.10	ENSMUSG00000029368.11	Alb	chr5	protein_coding	albumin
chr5	90640629	90643808	+	90640629	90643823	A3SS	0.5	50	50	ENSMUST00000042755.7	ENSMUSG00000054932.7	Afp	chr5	protein_coding	alpha fetoprotein
chr5	90729038	90732595	-	90701369	90732595	A3SS	0.5	50	50	ENSMUST00000200893.4	ENSMUSG00000106863.4	Gm42109	chr5	lncRNA	predicted gene, 42109
chr5	90779465	90788441	-	90779465	90788246	5pMXE	0.5	50	50	ENSMUST00000202784.4	ENSMUSG00000029370.11	Rassf6	chr5	protein_coding	Ras association (RalGDS/AF-6) domain family member 6
chr5	90765644;90770112	90770006;90779367	-	90765644	90779367	cassetteExon	0.5	100	100	ENSMUST00000202784.4	ENSMUSG00000029370.11	Rassf6	chr5	protein_coding	Ras association (RalGDS/AF-6) domain family member 6
chr5	90765644;90770146	90770006;90779367	-	90765644	90779367	cassetteExon	0.5	100	100	ENSMUST00000202784.4	ENSMUSG00000029370.11	Rassf6	chr5	protein_coding	Ras association (RalGDS/AF-6) domain family member 6
chr5	90756832	90757574	-	90756812	90757574	A3SS	0.33	50	50	ENSMUST00000202784.4	ENSMUSG00000029370.11	Rassf6	chr5	protein_coding	Ras association (RalGDS/AF-6) domain family member 6
chr5	90756851	90757574	-	90756812	90757574	A3SS	0.33	50	50	ENSMUST00000202784.4	ENSMUSG00000029370.11	Rassf6	chr5	protein_coding	Ras association (RalGDS/AF-6) domain family member 6
chr5	90756832	90757574	-	90756851	90757574	A3SS	0.33	50	50	ENSMUST00000031317.10	ENSMUSG00000029370.11	Rassf6	chr5	protein_coding	Ras association (RalGDS/AF-6) domain family member 6
chr5	90770112	90779367	-	90770146	90779367	A3SS	0.33	50	50	ENSMUST00000201121.4	ENSMUSG00000029370.11	Rassf6	chr5	protein_coding	Ras association (RalGDS/AF-6) domain family member 6
chr5	90765644	90779367	-	90770112	90779367	3pMXE	0.33	50	50	ENSMUST00000201370.2	ENSMUSG00000029370.11	Rassf6	chr5	protein_coding	Ras association (RalGDS/AF-6) domain family member 6
chr5	91079292	91094649	+	91079292	91080771	3pMXE	0.5	50	50	ENSMUST00000202781.2	ENSMUSG00000029376.9	Mthfd2l	chr5	protein_coding	methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like
chr5	91175424	91176159	+	91175424	91176112	A3SS	0.5	50	50	ENSMUST00000202724.4	ENSMUSG00000035020.12	Epgn	chr5	protein_coding	epithelial mitogen
chr5	91510310	91524773	-	91510310;91514097	91513980;91524773	ES	0.5	50	50	ENSMUST00000121044.6	ENSMUSG00000082361.7	Btc	chr5	protein_coding	betacellulin, epidermal growth factor family member
chr5	91513832	91513980	-	91510310	91513980	A3SS	0.5	50	50	ENSMUST00000121044.6	ENSMUSG00000082361.7	Btc	chr5	protein_coding	betacellulin, epidermal growth factor family member
chr5	92105509	92110489	-	92105509;92105856	92105737;92110489	ES	0.5	50	50	ENSMUST00000031345.15	ENSMUSG00000029397.16	Rchy1	chr5	protein_coding	ring finger and CHY zinc finger domain containing 1
chr5	92105856	92108564	-	92105856	92110489	A5SS	0.5	50	50	ENSMUST00000031345.15	ENSMUSG00000029397.16	Rchy1	chr5	protein_coding	ring finger and CHY zinc finger domain containing 1
chr5	92110837	92111542	+	92110837;92111381	92111094;92111542	ES	0.5	50	50	ENSMUST00000193925.6	ENSMUSG00000102644.6	Thap6	chr5	transcribed_unitary_pseudogene	THAP domain containing 6
chr5	92111381	92112955	+	92111381;92111644	92111542;92112955	ES	0.5	50	50	ENSMUST00000193925.6	ENSMUSG00000102644.6	Thap6	chr5	transcribed_unitary_pseudogene	THAP domain containing 6
chr5	92110837;92111381	92111094;92112955	+	92110837;92111644	92111542;92112955	MXE	0.5	100	100	ENSMUST00000192939.6	ENSMUSG00000102644.6	Thap6	chr5	transcribed_unitary_pseudogene	THAP domain containing 6
chr5	92110837	92111542	+	92111381	92111542	5pMXE	0.5	50	50	ENSMUST00000191860.2	ENSMUSG00000102644.6	Thap6	chr5	transcribed_unitary_pseudogene	THAP domain containing 6
chr5	92155993;92156912	92156824;92164981	-	92155993	92164981	cassetteExon	0.5	100	100	ENSMUST00000069937.11	ENSMUSG00000029403.15	Cdkl2	chr5	protein_coding	cyclin-dependent kinase-like 2 (CDC2-related kinase)
chr5	92170321	92172795	-	92170091	92172795	A3SS	0.5	50	50	ENSMUST00000069937.11	ENSMUSG00000029403.15	Cdkl2	chr5	protein_coding	cyclin-dependent kinase-like 2 (CDC2-related kinase)
chr5	92187295	92190046	-	92187295	92190658	A5SS	0.5	50	50	ENSMUST00000069937.11	ENSMUSG00000029403.15	Cdkl2	chr5	protein_coding	cyclin-dependent kinase-like 2 (CDC2-related kinase)
chr5	92205929;92211294	92211196;92212184	-	92205929	92212184	cassetteExon	0.5	100	100	ENSMUST00000167918.8	ENSMUSG00000029405.17	G3bp2	chr5	protein_coding	GTPase activating protein (SH3 domain) binding protein 2
chr5	92214441	92215311	-	92214441	92216184	A5SS	0.5	50	50	ENSMUST00000167918.8	ENSMUSG00000029405.17	G3bp2	chr5	protein_coding	GTPase activating protein (SH3 domain) binding protein 2
chr5	92221137	92230609	-	92221137	92231194	A5SS	0.33	50	50	ENSMUST00000167918.8	ENSMUSG00000029405.17	G3bp2	chr5	protein_coding	GTPase activating protein (SH3 domain) binding protein 2
chr5	92221137	92231388	-	92221137	92231194	A5SS	0.33	50	50	ENSMUST00000167918.8	ENSMUSG00000029405.17	G3bp2	chr5	protein_coding	GTPase activating protein (SH3 domain) binding protein 2
chr5	92221137	92230609	-	92221137	92231388	A5SS	0.33	50	50	ENSMUST00000113127.7	ENSMUSG00000029405.17	G3bp2	chr5	protein_coding	GTPase activating protein (SH3 domain) binding protein 2
chr5	92342034	92343207	+	92342034	92347676	A3SS	0.5	50	50	ENSMUST00000202155.2	ENSMUSG00000029407.11	Uso1	chr5	protein_coding	USO1 vesicle docking factor
chr5	92346293	92347676	+	92342034	92347676	A5SS	0.5	50	50	ENSMUST00000202155.2	ENSMUSG00000029407.11	Uso1	chr5	protein_coding	USO1 vesicle docking factor
chr5	92376593	92376776	-	92376593	92378262	A5SS	0.5	50	50	ENSMUST00000201130.4	ENSMUSG00000029410.12	Ppef2	chr5	protein_coding	protein phosphatase, EF hand calcium-binding domain 2
chr5	92407490	92410368	-	92407490;92409239	92409211;92410368	ES	0.5	50	50	ENSMUST00000113102.10	ENSMUSG00000029413.15	Naaa	chr5	protein_coding	N-acylethanolamine acid amidase
chr5	92424936	92425771	-	92424942	92425771	A3SS	0.5	50	50	ENSMUST00000113102.10	ENSMUSG00000029413.15	Naaa	chr5	protein_coding	N-acylethanolamine acid amidase
chr5	92446117	92447921	-	92446120	92447921	A3SS	0.5	50	50	ENSMUST00000031364.5	ENSMUSG00000029415.5	Sdad1	chr5	protein_coding	SDA1 domain containing 1
chr5	92479771	92535993	+	92479771;92480841	92480758;92535993	ES	0.16	50	50	ENSMUST00000154245.8	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92536070	92549855	+	92536070	92540328	3pMXE	0.5	50	50	ENSMUST00000154245.8	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92479771	92480707	+	92479771	92480758	A3SS	0.33	50	50	ENSMUST00000154245.8	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92480841	92492971	+	92480841	92535993	A3SS	0.5	50	50	ENSMUST00000154245.8	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92524909	92535993	+	92480841	92535993	A5SS	0.16	50	50	ENSMUST00000154245.8	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92534850	92535993	+	92480841	92535993	A5SS	0.16	50	50	ENSMUST00000154245.8	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92535674	92535993	+	92480841	92535993	A5SS	0.16	50	50	ENSMUST00000154245.8	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92535731	92535993	+	92480841	92535993	A5SS	0.16	50	50	ENSMUST00000154245.8	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92479771;92480841	92480707;92535993	+	92479771	92535993	cassetteExon	0.5	100	100	ENSMUST00000125462.8	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92524909	92535993	+	92479771	92535993	A5SS	0.16	50	50	ENSMUST00000125462.8	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92534850	92535993	+	92479771	92535993	A5SS	0.16	50	50	ENSMUST00000125462.8	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92535674	92535993	+	92479771	92535993	A5SS	0.16	50	50	ENSMUST00000125462.8	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92535731	92535993	+	92479771	92535993	A5SS	0.16	50	50	ENSMUST00000125462.8	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92536070	92549855	+	92536070;92541036	92540328;92549855	ES	0.5	50	50	ENSMUST00000113083.9	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92552725;92553838	92553802;92557129	+	92552725	92557129	cassetteExon	0.5	100	100	ENSMUST00000113083.9	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92552725;92553838	92553803;92557129	+	92552725	92557129	cassetteExon	0.5	100	100	ENSMUST00000113083.9	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92559054;92560053	92560024;92562101	+	92559054	92562101	cassetteExon	0.5	100	100	ENSMUST00000113083.9	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92559054;92560130	92560024;92562101	+	92559054	92562101	cassetteExon	0.5	100	100	ENSMUST00000113083.9	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92551515	92552696	+	92551486	92552696	A5SS	0.5	50	50	ENSMUST00000113083.9	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92534850	92535993	+	92524909	92535993	A5SS	0.16	50	50	ENSMUST00000120781.8	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92535674	92535993	+	92524909	92535993	A5SS	0.16	50	50	ENSMUST00000120781.8	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92535731	92535993	+	92524909	92535993	A5SS	0.16	50	50	ENSMUST00000120781.8	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92535674	92535993	+	92534850	92535993	A5SS	0.16	50	50	ENSMUST00000128246.8	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92535731	92535993	+	92534850	92535993	A5SS	0.16	50	50	ENSMUST00000128246.8	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92535731	92535993	+	92535674	92535993	A5SS	0.16	50	50	ENSMUST00000145072.8	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92552725	92553803	+	92552725	92553802	A3SS	0.33	50	50	ENSMUST00000117108.8	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92560130	92562101	+	92560053	92562101	A5SS	0.33	50	50	ENSMUST00000118106.8	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92541036	92549855	+	92536070	92549855	A5SS	0.5	50	50	ENSMUST00000129222.2	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92549887	92551454	+	92549887	92557129	A3SS	0.5	50	50	ENSMUST00000119587.8	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92552725	92557129	+	92549887	92557129	A5SS	0.33	50	50	ENSMUST00000119587.8	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92553838	92557129	+	92549887	92557129	A5SS	0.33	50	50	ENSMUST00000119587.8	ENSMUSG00000034842.17	Art3	chr5	protein_coding	ADP-ribosyltransferase 3
chr5	92578981;92579950	92579889;92582863	-	92578981	92582863	cassetteExon	0.5	100	100	ENSMUST00000038514.15	ENSMUSG00000034826.15	Nup54	chr5	protein_coding	nucleoporin 54
chr5	92578981;92582242	92582081;92582863	-	92578981	92582863	cassetteExon	0.5	100	100	ENSMUST00000038514.15	ENSMUSG00000034826.15	Nup54	chr5	protein_coding	nucleoporin 54
chr5	92578981	92582371	-	92578981	92582863	A5SS	0.25	50	50	ENSMUST00000038514.15	ENSMUSG00000034826.15	Nup54	chr5	protein_coding	nucleoporin 54
chr5	92578981	92579889	-	92578981	92582371	A5SS	0.25	50	50	ENSMUST00000142525.8	ENSMUSG00000034826.15	Nup54	chr5	protein_coding	nucleoporin 54
chr5	92578981	92582081	-	92578981	92582371	A5SS	0.25	50	50	ENSMUST00000142525.8	ENSMUSG00000034826.15	Nup54	chr5	protein_coding	nucleoporin 54
chr5	92578981;92582242	92582081;92582863	-	92578981;92579950	92579889;92582863	MXE	0.5	100	100	ENSMUST00000146470.2	ENSMUSG00000034826.15	Nup54	chr5	protein_coding	nucleoporin 54
chr5	92582242	92582512	-	92582242	92582863	A5SS	0.5	50	50	ENSMUST00000135112.8	ENSMUSG00000034826.15	Nup54	chr5	protein_coding	nucleoporin 54
chr5	92578981	92579889	-	92578981	92582081	A5SS	0.33	50	50	ENSMUST00000130156.2	ENSMUSG00000034826.15	Nup54	chr5	protein_coding	nucleoporin 54
chr5	92703006	92713787	+	92703006;92710416	92710080;92713787	ES	0.5	50	50	ENSMUST00000146417.9	ENSMUSG00000057068.16	Fam47e	chr5	protein_coding	family with sequence similarity 47, member E
chr5	92722572	92727463	+	92722572;92726432	92726331;92727463	ES	0.5	50	50	ENSMUST00000146417.9	ENSMUSG00000057068.16	Fam47e	chr5	protein_coding	family with sequence similarity 47, member E
chr5	92733270	92738375	+	92733270;92735452	92735375;92738375	ES	0.33	50	50	ENSMUST00000146417.9	ENSMUSG00000057068.16	Fam47e	chr5	protein_coding	family with sequence similarity 47, member E
chr5	92719569	92722428	+	92713920	92722428	A5SS	0.5	50	50	ENSMUST00000146417.9	ENSMUSG00000057068.16	Fam47e	chr5	protein_coding	family with sequence similarity 47, member E
chr5	92719569	92735375	+	92733270	92735375	A5SS&ES	0.5	50	50	ENSMUST00000146417.9	ENSMUSG00000057068.16	Fam47e	chr5	protein_coding	family with sequence similarity 47, member E
chr5	92722572	92733115	+	92722572;92727543	92727463;92733115	ES	0.5	50	50	ENSMUST00000149617.2	ENSMUSG00000057068.16	Fam47e	chr5	protein_coding	family with sequence similarity 47, member E
chr5	92719569;92735452	92735375;92738375	+	92719569;92722572	92722428;92738375	MXE	0.5	100	100	ENSMUST00000176621.8	ENSMUSG00000057068.16	Fam47e	chr5	protein_coding	family with sequence similarity 47, member E
chr5	92722572;92733270	92733115;92738375	+	92722572	92738375	cassetteExon	0.5	100	100	ENSMUST00000176621.8	ENSMUSG00000057068.16	Fam47e	chr5	protein_coding	family with sequence similarity 47, member E
chr5	92722572	92726331	+	92722572	92738375	A3SS	0.25	50	50	ENSMUST00000176621.8	ENSMUSG00000057068.16	Fam47e	chr5	protein_coding	family with sequence similarity 47, member E
chr5	92722572	92727463	+	92722572	92738375	A3SS	0.25	50	50	ENSMUST00000176621.8	ENSMUSG00000057068.16	Fam47e	chr5	protein_coding	family with sequence similarity 47, member E
chr5	92733270	92738375	+	92735452	92738375	A5SS&ES	0.33	50	50	ENSMUST00000175974.2	ENSMUSG00000057068.16	Fam47e	chr5	protein_coding	family with sequence similarity 47, member E
chr5	92722572	92726331	+	92722572	92733115	A3SS	0.25	50	50	ENSMUST00000082382.8	ENSMUSG00000057068.16	Fam47e	chr5	protein_coding	family with sequence similarity 47, member E
chr5	92751196	92752741	+	92751196	92752453	3pMXE	0.5	50	50	ENSMUST00000200941.2	ENSMUSG00000047963.8	Stbd1	chr5	protein_coding	starch binding domain 1
chr5	92751196;92752538	92752453;92752741	+	92751196	92752741	cassetteExon	0.5	100	100	ENSMUST00000050952.4	ENSMUSG00000047963.8	Stbd1	chr5	protein_coding	starch binding domain 1
chr5	92756352;92757925	92757818;92760304	-	92756352	92760304	cassetteExon	0.5	100	100	ENSMUST00000136004.2	ENSMUSG00000050050.18	Ccdc158	chr5	protein_coding	coiled-coil domain containing 158
chr5	92820575	92823032	-	92820575	92822917	5pMXE	0.33	50	50	ENSMUST00000060930.10	ENSMUSG00000050050.18	Ccdc158	chr5	protein_coding	coiled-coil domain containing 158
chr5	92820575	92823037	-	92820575	92822917	5pMXE	0.33	50	50	ENSMUST00000060930.10	ENSMUSG00000050050.18	Ccdc158	chr5	protein_coding	coiled-coil domain containing 158
chr5	92782187	92784050	-	92782175	92784050	A3SS	0.5	50	50	ENSMUST00000060930.10	ENSMUSG00000050050.18	Ccdc158	chr5	protein_coding	coiled-coil domain containing 158
chr5	92802031	92805728	-	92798672	92805728	A3SS	0.5	50	50	ENSMUST00000060930.10	ENSMUSG00000050050.18	Ccdc158	chr5	protein_coding	coiled-coil domain containing 158
chr5	92820575	92823037	-	92820575	92823032	A5SS	0.33	50	50	ENSMUST00000151180.8	ENSMUSG00000050050.18	Ccdc158	chr5	protein_coding	coiled-coil domain containing 158
chr5	92957420	93067504	+	92928766	93067504	A5SS	0.25	50	50	ENSMUST00000113055.9	ENSMUSG00000029381.17	Shroom3	chr5	protein_coding	shroom family member 3
chr5	93004448	93067504	+	92928766	93067504	A5SS	0.25	50	50	ENSMUST00000113055.9	ENSMUSG00000029381.17	Shroom3	chr5	protein_coding	shroom family member 3
chr5	93046079	93067504	+	92928766	93067504	A5SS	0.25	50	50	ENSMUST00000113055.9	ENSMUSG00000029381.17	Shroom3	chr5	protein_coding	shroom family member 3
chr5	93073341	93081613	+	93067635	93081613	A5SS	0.5	50	50	ENSMUST00000113055.9	ENSMUSG00000029381.17	Shroom3	chr5	protein_coding	shroom family member 3
chr5	93110489	93112215	+	93110222	93112215	A5SS	0.5	50	50	ENSMUST00000113055.9	ENSMUSG00000029381.17	Shroom3	chr5	protein_coding	shroom family member 3
chr5	92957420	92983517	+	92957420	93067504	A3SS	0.5	50	50	ENSMUST00000113054.9	ENSMUSG00000029381.17	Shroom3	chr5	protein_coding	shroom family member 3
chr5	93004448	93067504	+	92957420	93067504	A5SS	0.25	50	50	ENSMUST00000113054.9	ENSMUSG00000029381.17	Shroom3	chr5	protein_coding	shroom family member 3
chr5	93046079	93067504	+	92957420	93067504	A5SS	0.25	50	50	ENSMUST00000113054.9	ENSMUSG00000029381.17	Shroom3	chr5	protein_coding	shroom family member 3
chr5	93046079	93067504	+	93004448	93067504	A5SS	0.25	50	50	ENSMUST00000225438.2	ENSMUSG00000029381.17	Shroom3	chr5	protein_coding	shroom family member 3
chr5	93315546	93323899	+	93315546	93319198	3pMXE	0.25	50	50	ENSMUST00000074733.11	ENSMUSG00000058013.12	Septin11	chr5	protein_coding	septin 11
chr5	93241456;93286396	93286297;93287308	+	93241456	93287308	cassetteExon	0.5	100	100	ENSMUST00000074733.11	ENSMUSG00000058013.12	Septin11	chr5	protein_coding	septin 11
chr5	93241456;93286455	93286297;93287308	+	93241456	93287308	cassetteExon	0.5	100	100	ENSMUST00000074733.11	ENSMUSG00000058013.12	Septin11	chr5	protein_coding	septin 11
chr5	93315546	93321329	+	93315546	93319198	A3SS	0.25	50	50	ENSMUST00000074733.11	ENSMUSG00000058013.12	Septin11	chr5	protein_coding	septin 11
chr5	93315546	93321332	+	93315546	93319198	A3SS	0.25	50	50	ENSMUST00000074733.11	ENSMUSG00000058013.12	Septin11	chr5	protein_coding	septin 11
chr5	93286396	93287308	+	93286455	93287308	A5SS	0.33	50	50	ENSMUST00000202196.4	ENSMUSG00000058013.12	Septin11	chr5	protein_coding	septin 11
chr5	93315546;93321396	93321329;93323899	+	93315546	93323899	cassetteExon	0.5	100	100	ENSMUST00000202308.4	ENSMUSG00000058013.12	Septin11	chr5	protein_coding	septin 11
chr5	93315546;93321396	93321332;93323899	+	93315546	93323899	cassetteExon	0.5	100	100	ENSMUST00000202308.4	ENSMUSG00000058013.12	Septin11	chr5	protein_coding	septin 11
chr5	93315546	93321329	+	93315546	93321332	A3SS	0.25	50	50	ENSMUST00000201421.4	ENSMUSG00000058013.12	Septin11	chr5	protein_coding	septin 11
chr5	93315546	93323899	+	93315546	93321332	A3SS&ES	0.25	50	50	ENSMUST00000201421.4	ENSMUSG00000058013.12	Septin11	chr5	protein_coding	septin 11
chr5	93321396	93323899	+	93321396	93323263	A3SS	0.5	50	50	ENSMUST00000201421.4	ENSMUSG00000058013.12	Septin11	chr5	protein_coding	septin 11
chr5	93331279	93335939	-	93331279;93335677	93335447;93335939	ES	0.5	50	50	ENSMUST00000058550.15	ENSMUSG00000063015.13	Ccni	chr5	protein_coding	cyclin I
chr5	93350321;93353566	93353301;93353773	-	93350321	93353773	cassetteExon	0.5	100	100	ENSMUST00000058550.15	ENSMUSG00000063015.13	Ccni	chr5	protein_coding	cyclin I
chr5	93350321	93351126	-	93350321	93353773	A5SS	0.33	50	50	ENSMUST00000058550.15	ENSMUSG00000063015.13	Ccni	chr5	protein_coding	cyclin I
chr5	93331279	93335939	-	93335677	93335939	3pMXE	0.5	50	50	ENSMUST00000123033.2	ENSMUSG00000063015.13	Ccni	chr5	protein_coding	cyclin I
chr5	93350321	93353301	-	93350321	93351126	5pMXE	0.33	50	50	ENSMUST00000151568.8	ENSMUSG00000063015.13	Ccni	chr5	protein_coding	cyclin I
chr5	93415656	93416165	+	93415656	93416481	A3SS	0.5	50	50	ENSMUST00000031331.13	ENSMUSG00000029385.15	Ccng2	chr5	protein_coding	cyclin G2
chr5	93417261	93417359	+	93417261	93418653	A3SS	0.5	50	50	ENSMUST00000031331.13	ENSMUSG00000029385.15	Ccng2	chr5	protein_coding	cyclin G2
chr5	93633247	93682640	-	93633247	93641429	5pMXE	0.5	50	50	ENSMUST00000201432.4	ENSMUSG00000096044.5	Pramel33	chr5	protein_coding	PRAME like 33
chr5	93784602	93786499	-	93784602;93786009	93785419;93786499	ES	0.5	50	50	ENSMUST00000162964.8	ENSMUSG00000070686.11	Pramel34	chr5	protein_coding	PRAME like 34
chr5	93816458	93819195	-	93786792	93819195	A3SS	0.5	50	50	ENSMUST00000162964.8	ENSMUSG00000070686.11	Pramel34	chr5	protein_coding	PRAME like 34
chr5	93784602	93785392	-	93784602	93785419	A5SS	0.25	50	50	ENSMUST00000162964.8	ENSMUSG00000070686.11	Pramel34	chr5	protein_coding	PRAME like 34
chr5	93784602	93785853	-	93784602	93785419	A5SS	0.25	50	50	ENSMUST00000162964.8	ENSMUSG00000070686.11	Pramel34	chr5	protein_coding	PRAME like 34
chr5	93786792	93813259	-	93786792	93819195	A5SS	0.5	50	50	ENSMUST00000162964.8	ENSMUSG00000070686.11	Pramel34	chr5	protein_coding	PRAME like 34
chr5	93784602;93786009	93785853;93786499	-	93784602	93786499	cassetteExon	0.5	100	100	ENSMUST00000076321.13	ENSMUSG00000070686.11	Pramel34	chr5	protein_coding	PRAME like 34
chr5	93784602	93785392	-	93784602	93786499	A5SS	0.25	50	50	ENSMUST00000076321.13	ENSMUSG00000070686.11	Pramel34	chr5	protein_coding	PRAME like 34
chr5	93784602	93785419	-	93784602	93786499	A5SS	0.25	50	50	ENSMUST00000076321.13	ENSMUSG00000070686.11	Pramel34	chr5	protein_coding	PRAME like 34
chr5	93784602	93786499	-	93784602;93786009	93785392;93786499	ES	0.5	50	50	ENSMUST00000159691.2	ENSMUSG00000070686.11	Pramel34	chr5	protein_coding	PRAME like 34
chr5	93784602	93785853	-	93784602	93785392	A5SS	0.25	50	50	ENSMUST00000159691.2	ENSMUSG00000070686.11	Pramel34	chr5	protein_coding	PRAME like 34
chr5	93784602	93786499	-	93784602	93785853	5pMXE	0.25	50	50	ENSMUST00000161919.2	ENSMUSG00000070686.11	Pramel34	chr5	protein_coding	PRAME like 34
chr5	93784602	93786499	-	93786009	93786499	3pMXE	0.5	50	50	ENSMUST00000160382.5	ENSMUSG00000070686.11	Pramel34	chr5	protein_coding	PRAME like 34
chr5	94226347	94226816	+	94226347	94226813	A3SS	0.5	50	50	ENSMUST00000139102.2	ENSMUSG00000072821.5	Gm6351	chr5	protein_coding	predicted gene 6351
chr5	94227403	94228227	+	94226933	94228227	A5SS	0.5	50	50	ENSMUST00000139102.2	ENSMUSG00000072821.5	Gm6351	chr5	protein_coding	predicted gene 6351
chr5	94462614	94463083	+	94462614	94463080	A3SS	0.5	50	50	ENSMUST00000086050.3	ENSMUSG00000095718.3	Pramel40	chr5	protein_coding	PRAME like 40
chr5	94525307	94529205	+	94487670	94529205	A5SS	0.5	50	50	ENSMUST00000097477.7	ENSMUSG00000073497.7	AA792892	chr5	protein_coding	expressed sequence AA792892
chr5	94593963	94594432	+	94593963	94594429	A3SS	0.5	50	50	ENSMUST00000202916.2	ENSMUSG00000074011.5	Pramel41	chr5	protein_coding	PRAME like 41
chr5	94682994	94683659	+	94682994	94693443	A3SS	0.5	50	50	ENSMUST00000201138.4	ENSMUSG00000095074.5	Pramel42	chr5	protein_coding	PRAME like 42
chr5	94772158	94772626	+	94772158	94772623	A3SS	0.5	50	50	ENSMUST00000201552.2	ENSMUSG00000094195.3	Pramel44	chr5	protein_coding	PRAME like 44
chr5	95021942	95022608	+	95021942	95032408	A3SS	0.5	50	50	ENSMUST00000202911.4	ENSMUSG00000095954.5	Gm3183	chr5	protein_coding	predicted gene 3183
chr5	95257186	95258450	+	95257656	95258450	A5SS	0.5	50	50	ENSMUST00000238517.2	ENSMUSG00000092166.3	Pramel45	chr5	protein_coding	PRAME like 45
chr5	95453887	95488043	+	95453887;95457182	95457080;95488043	ES	0.5	50	50	ENSMUST00000161225.8	ENSMUSG00000079424.9	Pramel47	chr5	protein_coding	PRAME like 47
chr5	95488336	95490230	+	95488336;95489418	95488828;95490230	ES	0.33	50	50	ENSMUST00000161225.8	ENSMUSG00000079424.9	Pramel47	chr5	protein_coding	PRAME like 47
chr5	95489445	95490230	+	95489418	95490230	A5SS	0.33	50	50	ENSMUST00000161225.8	ENSMUSG00000079424.9	Pramel47	chr5	protein_coding	PRAME like 47
chr5	95488336	95490230	+	95488336;95489445	95488828;95490230	ES	0.33	50	50	ENSMUST00000160090.2	ENSMUSG00000079424.9	Pramel47	chr5	protein_coding	PRAME like 47
chr5	95488336	95488828	+	95488336	95490230	A3SS	0.5	50	50	ENSMUST00000160045.2	ENSMUSG00000079424.9	Pramel47	chr5	protein_coding	PRAME like 47
chr5	95489418	95490230	+	95488336	95490230	A5SS	0.33	50	50	ENSMUST00000160045.2	ENSMUSG00000079424.9	Pramel47	chr5	protein_coding	PRAME like 47
chr5	95489445	95490230	+	95488336	95490230	A5SS	0.33	50	50	ENSMUST00000160045.2	ENSMUSG00000079424.9	Pramel47	chr5	protein_coding	PRAME like 47
chr5	95621491	95629445	+	95604760	95629445	A5SS	0.5	50	50	ENSMUST00000094593.7	ENSMUSG00000070677.9	Pramel48	chr5	protein_coding	PRAME like 48
chr5	95666840	95667709	+	95666840	95669260	A3SS	0.5	50	50	ENSMUST00000201629.4	ENSMUSG00000079423.7	Gm3286	chr5	protein_coding	predicted gene 3286
chr5	95665336	95666527	+	95658694	95666527	A5SS	0.5	50	50	ENSMUST00000201629.4	ENSMUSG00000079423.7	Gm3286	chr5	protein_coding	predicted gene 3286
chr5	95668299	95669260	+	95666840	95669260	A5SS	0.5	50	50	ENSMUST00000201629.4	ENSMUSG00000079423.7	Gm3286	chr5	protein_coding	predicted gene 3286
chr5	95666840	95669260	+	95666840;95668299	95667709;95669260	ES	0.5	50	50	ENSMUST00000200932.4	ENSMUSG00000079423.7	Gm3286	chr5	protein_coding	predicted gene 3286
chr5	95891967	95892436	+	95891967	95892433	A3SS	0.5	50	50	ENSMUST00000154086.8	ENSMUSG00000072814.11	Gm7982	chr5	protein_coding	predicted gene 7982
chr5	95893023	95893847	+	95892553	95893847	A5SS	0.5	50	50	ENSMUST00000154086.8	ENSMUSG00000072814.11	Gm7982	chr5	protein_coding	predicted gene 7982
chr5	96281991	96311881	-	96281991	96309796	5pMXE	0.16	50	50	ENSMUST00000155901.8	ENSMUSG00000034724.19	Cnot6l	chr5	protein_coding	CCR4-NOT transcription complex, subunit 6-like
chr5	96279100	96281870	-	96279104	96281870	A3SS	0.5	50	50	ENSMUST00000155901.8	ENSMUSG00000034724.19	Cnot6l	chr5	protein_coding	CCR4-NOT transcription complex, subunit 6-like
chr5	96225251	96227931	-	96225251	96227792	A5SS	0.5	50	50	ENSMUST00000155901.8	ENSMUSG00000034724.19	Cnot6l	chr5	protein_coding	CCR4-NOT transcription complex, subunit 6-like
chr5	96281991	96309221	-	96281991	96309796	A5SS	0.16	50	50	ENSMUST00000155901.8	ENSMUSG00000034724.19	Cnot6l	chr5	protein_coding	CCR4-NOT transcription complex, subunit 6-like
chr5	96281991	96309478	-	96281991	96309796	A5SS	0.16	50	50	ENSMUST00000155901.8	ENSMUSG00000034724.19	Cnot6l	chr5	protein_coding	CCR4-NOT transcription complex, subunit 6-like
chr5	96281991	96309551	-	96281991	96309796	A5SS	0.16	50	50	ENSMUST00000155901.8	ENSMUSG00000034724.19	Cnot6l	chr5	protein_coding	CCR4-NOT transcription complex, subunit 6-like
chr5	96281991	96309709	-	96281991	96309796	A5SS	0.16	50	50	ENSMUST00000155901.8	ENSMUSG00000034724.19	Cnot6l	chr5	protein_coding	CCR4-NOT transcription complex, subunit 6-like
chr5	96281991	96309709	-	96281991	96309551	5pMXE	0.16	50	50	ENSMUST00000036646.14	ENSMUSG00000034724.19	Cnot6l	chr5	protein_coding	CCR4-NOT transcription complex, subunit 6-like
chr5	96281991	96311881	-	96281991	96309551	5pMXE	0.16	50	50	ENSMUST00000036646.14	ENSMUSG00000034724.19	Cnot6l	chr5	protein_coding	CCR4-NOT transcription complex, subunit 6-like
chr5	96281991	96309221	-	96281991	96309551	A5SS	0.16	50	50	ENSMUST00000036646.14	ENSMUSG00000034724.19	Cnot6l	chr5	protein_coding	CCR4-NOT transcription complex, subunit 6-like
chr5	96281991	96309478	-	96281991	96309551	A5SS	0.16	50	50	ENSMUST00000036646.14	ENSMUSG00000034724.19	Cnot6l	chr5	protein_coding	CCR4-NOT transcription complex, subunit 6-like
chr5	96281991	96309478	-	96281991	96309221	5pMXE	0.16	50	50	ENSMUST00000122003.8	ENSMUSG00000034724.19	Cnot6l	chr5	protein_coding	CCR4-NOT transcription complex, subunit 6-like
chr5	96281991	96309709	-	96281991	96309221	5pMXE	0.16	50	50	ENSMUST00000122003.8	ENSMUSG00000034724.19	Cnot6l	chr5	protein_coding	CCR4-NOT transcription complex, subunit 6-like
chr5	96281991	96311881	-	96281991	96309221	5pMXE	0.16	50	50	ENSMUST00000122003.8	ENSMUSG00000034724.19	Cnot6l	chr5	protein_coding	CCR4-NOT transcription complex, subunit 6-like
chr5	96281991	96309709	-	96281991	96309478	5pMXE	0.16	50	50	ENSMUST00000129646.8	ENSMUSG00000034724.19	Cnot6l	chr5	protein_coding	CCR4-NOT transcription complex, subunit 6-like
chr5	96281991	96311881	-	96281991	96309478	5pMXE	0.16	50	50	ENSMUST00000129646.8	ENSMUSG00000034724.19	Cnot6l	chr5	protein_coding	CCR4-NOT transcription complex, subunit 6-like
chr5	96281991	96311881	-	96281991	96309709	5pMXE	0.16	50	50	ENSMUST00000141383.8	ENSMUSG00000034724.19	Cnot6l	chr5	protein_coding	CCR4-NOT transcription complex, subunit 6-like
chr5	96765317	96766218	+	96762774	96766218	A5SS	0.33	50	50	ENSMUST00000036019.5	ENSMUSG00000034687.9	Fras1	chr5	protein_coding	Fraser extracellular matrix complex subunit 1
chr5	96765548	96766218	+	96762774	96766218	A5SS	0.33	50	50	ENSMUST00000036019.5	ENSMUSG00000034687.9	Fras1	chr5	protein_coding	Fraser extracellular matrix complex subunit 1
chr5	96778034	96783917	+	96766361	96783917	A5SS	0.5	50	50	ENSMUST00000036019.5	ENSMUSG00000034687.9	Fras1	chr5	protein_coding	Fraser extracellular matrix complex subunit 1
chr5	96765548	96766218	+	96765317	96766218	A5SS	0.33	50	50	ENSMUST00000197126.5	ENSMUSG00000034687.9	Fras1	chr5	protein_coding	Fraser extracellular matrix complex subunit 1
chr5	96945312;96946854	96946743;96958909	+	96945312	96958909	cassetteExon	0.5	100	100	ENSMUST00000199330.5	ENSMUSG00000029484.13	Anxa3	chr5	protein_coding	annexin A3
chr5	96941422	96945260	+	96941282	96945260	A5SS	0.5	50	50	ENSMUST00000199330.5	ENSMUSG00000029484.13	Anxa3	chr5	protein_coding	annexin A3
chr5	96989949	96993360	+	96986274	96993360	A5SS	0.5	50	50	ENSMUST00000031447.12	ENSMUSG00000029484.13	Anxa3	chr5	protein_coding	annexin A3
chr5	97236023	97243771	-	97230467	97243771	A3SS	0.5	50	50	ENSMUST00000069453.9	ENSMUSG00000055725.12	Paqr3	chr5	protein_coding	progestin and adipoQ receptor family member III
chr5	97247539	97251219	-	97247602	97251219	A3SS	0.5	50	50	ENSMUST00000069453.9	ENSMUSG00000055725.12	Paqr3	chr5	protein_coding	progestin and adipoQ receptor family member III
chr5	97543354	97730075	+	97543354	97581770	A3SS&ES	0.5	50	50	ENSMUST00000181724.8	ENSMUSG00000097516.8	4930467D21Rik	chr5	lncRNA	RIKEN cDNA 4930467D21 gene
chr5	98065773	98085946	-	98034459	98085946	A3SS	0.5	50	50	ENSMUST00000031281.14	ENSMUSG00000029338.14	Antxr2	chr5	protein_coding	anthrax toxin receptor 2
chr5	98127893	98143857	-	98127893	98151086	A5SS	0.5	50	50	ENSMUST00000031281.14	ENSMUSG00000029338.14	Antxr2	chr5	protein_coding	anthrax toxin receptor 2
chr5	98331411	98332577	-	98331411	98332028	A5SS	0.5	50	50	ENSMUST00000057889.8	ENSMUSG00000045238.10	A730035I17Rik	chr5	lncRNA	RIKEN cDNA A730035I17 gene
chr5	98402619	98423070	+	98402619;98409905	98409802;98423070	ES	0.5	50	50	ENSMUST00000031280.2	ENSMUSG00000029337.3	Fgf5	chr5	protein_coding	fibroblast growth factor 5
chr5	98477323;98478727	98478672;98494091	+	98477323	98494091	cassetteExon	0.5	100	100	ENSMUST00000080333.8	ENSMUSG00000057816.8	Cfap299	chr5	protein_coding	cilia and flagella associated protein 299
chr5	98646238;98846459	98846265;98885428	+	98646238	98885428	cassetteExon	0.5	100	100	ENSMUST00000080333.8	ENSMUSG00000057816.8	Cfap299	chr5	protein_coding	cilia and flagella associated protein 299
chr5	99020866	99027597	+	99020793	99027597	A5SS	0.5	50	50	ENSMUST00000031278.6	ENSMUSG00000029335.6	Bmp3	chr5	protein_coding	bone morphogenetic protein 3
chr5	99117932	99119798	-	99117932	99119711	A5SS	0.5	50	50	ENSMUST00000161490.8	ENSMUSG00000029334.15	Prkg2	chr5	protein_coding	protein kinase, cGMP-dependent, type II
chr5	99388819	99390923	-	99388819;99389390	99389268;99390923	ES	0.5	50	50	ENSMUST00000031276.15	ENSMUSG00000089809.10	Rasgef1b	chr5	protein_coding	RasGEF domain family, member 1B
chr5	99391105	99524954	-	99391105	99400573	5pMXE	0.5	50	50	ENSMUST00000031276.15	ENSMUSG00000089809.10	Rasgef1b	chr5	protein_coding	RasGEF domain family, member 1B
chr5	99382547	99388682	-	99382550	99388682	A3SS	0.5	50	50	ENSMUST00000031276.15	ENSMUSG00000089809.10	Rasgef1b	chr5	protein_coding	RasGEF domain family, member 1B
chr5	99706804	99876603	-	99706804;99784268	99784221;99876603	ES	0.25	50	50	ENSMUST00000209346.2	ENSMUSG00000089809.10	Rasgef1b	chr5	protein_coding	RasGEF domain family, member 1B
chr5	99448004	99524954	-	99391105	99524954	A3SS	0.5	50	50	ENSMUST00000209346.2	ENSMUSG00000089809.10	Rasgef1b	chr5	protein_coding	RasGEF domain family, member 1B
chr5	99828691	99876603	-	99784268	99876603	A3SS	0.25	50	50	ENSMUST00000209346.2	ENSMUSG00000089809.10	Rasgef1b	chr5	protein_coding	RasGEF domain family, member 1B
chr5	99873430	99876603	-	99784268	99876603	A3SS	0.25	50	50	ENSMUST00000209346.2	ENSMUSG00000089809.10	Rasgef1b	chr5	protein_coding	RasGEF domain family, member 1B
chr5	99828691	99876603	-	99706804	99876603	A3SS	0.25	50	50	ENSMUST00000146396.8	ENSMUSG00000089809.10	Rasgef1b	chr5	protein_coding	RasGEF domain family, member 1B
chr5	99873430	99876603	-	99706804	99876603	A3SS	0.25	50	50	ENSMUST00000146396.8	ENSMUSG00000089809.10	Rasgef1b	chr5	protein_coding	RasGEF domain family, member 1B
chr5	99873430	99876603	-	99828691	99876603	A3SS	0.25	50	50	ENSMUST00000160803.2	ENSMUSG00000089809.10	Rasgef1b	chr5	protein_coding	RasGEF domain family, member 1B
chr5	99830411	99851313	+	99830411	99837567	3pMXE	0.25	50	50	ENSMUST00000159950.8	ENSMUSG00000089743.8	Gm16226	chr5	lncRNA	predicted gene 16226
chr5	99830411	99855080	+	99830411	99837567	3pMXE	0.25	50	50	ENSMUST00000159950.8	ENSMUSG00000089743.8	Gm16226	chr5	lncRNA	predicted gene 16226
chr5	99830411	99863421	+	99830411	99837567	3pMXE	0.25	50	50	ENSMUST00000159950.8	ENSMUSG00000089743.8	Gm16226	chr5	lncRNA	predicted gene 16226
chr5	99830411;99851384	99851313;99863421	+	99830411	99863421	cassetteExon	0.5	100	100	ENSMUST00000160096.2	ENSMUSG00000089743.8	Gm16226	chr5	lncRNA	predicted gene 16226
chr5	99830411;99855151	99855080;99863421	+	99830411	99863421	cassetteExon	0.5	100	100	ENSMUST00000160096.2	ENSMUSG00000089743.8	Gm16226	chr5	lncRNA	predicted gene 16226
chr5	99830411;99851384	99851313;99863421	+	99830411;99855151	99855080;99863421	MXE	0.5	100	100	ENSMUST00000162639.2	ENSMUSG00000089743.8	Gm16226	chr5	lncRNA	predicted gene 16226
chr5	99890402	99899115	-	99890402;99898411	99898201;99899115	ES	0.5	50	50	ENSMUST00000198449.5	ENSMUSG00000105218.5	Gm38413	chr5	lncRNA	predicted gene, 38413
chr5	99899242	99901274	-	99899242;99900682	99900590;99901274	ES	0.5	50	50	ENSMUST00000198449.5	ENSMUSG00000105218.5	Gm38413	chr5	lncRNA	predicted gene, 38413
chr5	100072802	100089085	+	100072802	100075957	3pMXE	0.5	50	50	ENSMUST00000212164.2	ENSMUSG00000105078.3	Vamp9	chr5	protein_coding	vesicle-associated membrane protein 9
chr5	100054264	100070876	+	100054264	100067055	A3SS&ES	0.5	50	50	ENSMUST00000212164.2	ENSMUSG00000105078.3	Vamp9	chr5	protein_coding	vesicle-associated membrane protein 9
chr5	100067125	100069370	+	100067125	100070929	A3SS	0.33	50	50	ENSMUST00000212164.2	ENSMUSG00000105078.3	Vamp9	chr5	protein_coding	vesicle-associated membrane protein 9
chr5	100067125	100070876	+	100067125	100070929	A3SS	0.33	50	50	ENSMUST00000212164.2	ENSMUSG00000105078.3	Vamp9	chr5	protein_coding	vesicle-associated membrane protein 9
chr5	100054264;100067125	100067055;100070876	+	100054264	100070876	cassetteExon	0.5	100	100	ENSMUST00000212307.2	ENSMUSG00000105078.3	Vamp9	chr5	protein_coding	vesicle-associated membrane protein 9
chr5	100069512	100070876	+	100054264	100070876	A5SS	0.33	50	50	ENSMUST00000212307.2	ENSMUSG00000105078.3	Vamp9	chr5	protein_coding	vesicle-associated membrane protein 9
chr5	100067125	100070876	+	100067125;100069512	100069370;100070876	ES	0.33	50	50	ENSMUST00000212249.2	ENSMUSG00000105078.3	Vamp9	chr5	protein_coding	vesicle-associated membrane protein 9
chr5	100054264	100070876	+	100067125	100070876	5pMXE	0.33	50	50	ENSMUST00000200398.2	ENSMUSG00000105078.3	Vamp9	chr5	protein_coding	vesicle-associated membrane protein 9
chr5	100110471	100111843	-	100110471;100111736	100111590;100111843	ES	0.5	50	50	ENSMUST00000172361.8	ENSMUSG00000000568.16	Hnrnpd	chr5	protein_coding	heterogeneous nuclear ribonucleoprotein D
chr5	100115246	100126251	-	100115246;100124449	100124393;100126251	ES	0.33	50	50	ENSMUST00000172361.8	ENSMUSG00000000568.16	Hnrnpd	chr5	protein_coding	heterogeneous nuclear ribonucleoprotein D
chr5	100109192;100110063	100109957;100110374	-	100109192	100110374	cassetteExon	0.5	100	100	ENSMUST00000172361.8	ENSMUSG00000000568.16	Hnrnpd	chr5	protein_coding	heterogeneous nuclear ribonucleoprotein D
chr5	100109192;100110063	100109993;100110374	-	100109192	100110374	cassetteExon	0.5	100	100	ENSMUST00000172361.8	ENSMUSG00000000568.16	Hnrnpd	chr5	protein_coding	heterogeneous nuclear ribonucleoprotein D
chr5	100114042	100126251	-	100114042;100115246	100115078;100126251	ES	0.33	50	50	ENSMUST00000112939.10	ENSMUSG00000000568.16	Hnrnpd	chr5	protein_coding	heterogeneous nuclear ribonucleoprotein D
chr5	100115246	100126251	-	100115246	100124393	5pMXE	0.5	50	50	ENSMUST00000171106.8	ENSMUSG00000000568.16	Hnrnpd	chr5	protein_coding	heterogeneous nuclear ribonucleoprotein D
chr5	100109192	100109993	-	100109192	100109957	A5SS	0.33	50	50	ENSMUST00000171106.8	ENSMUSG00000000568.16	Hnrnpd	chr5	protein_coding	heterogeneous nuclear ribonucleoprotein D
chr5	100124449	100126251	-	100114042	100126251	A3SS	0.33	50	50	ENSMUST00000168396.2	ENSMUSG00000000568.16	Hnrnpd	chr5	protein_coding	heterogeneous nuclear ribonucleoprotein D
chr5	100182843	100183963	-	100182843	100183494	5pMXE	0.5	50	50	ENSMUST00000135424.7	ENSMUSG00000029328.16	Hnrnpdl	chr5	protein_coding	heterogeneous nuclear ribonucleoprotein D-like
chr5	100182843;100183598	100183494;100183963	-	100182843	100183963	cassetteExon	0.5	100	100	ENSMUST00000128187.8	ENSMUSG00000029328.16	Hnrnpdl	chr5	protein_coding	heterogeneous nuclear ribonucleoprotein D-like
chr5	100185840	100186433	-	100185840	100186579	A5SS	0.5	50	50	ENSMUST00000128187.8	ENSMUSG00000029328.16	Hnrnpdl	chr5	protein_coding	heterogeneous nuclear ribonucleoprotein D-like
chr5	100182843	100183963	-	100183598	100183963	3pMXE	0.5	50	50	ENSMUST00000149384.8	ENSMUSG00000029328.16	Hnrnpdl	chr5	protein_coding	heterogeneous nuclear ribonucleoprotein D-like
chr5	100234113	100240794	-	100234113;100240693	100240626;100240794	ES	0.5	50	50	ENSMUST00000063192.15	ENSMUSG00000050640.17	Tmem150c	chr5	protein_coding	transmembrane protein 150C
chr5	100243555	100270494	-	100243555	100307325	A5SS	0.25	50	50	ENSMUST00000063192.15	ENSMUSG00000050640.17	Tmem150c	chr5	protein_coding	transmembrane protein 150C
chr5	100243555	100307078	-	100243555	100307325	A5SS	0.25	50	50	ENSMUST00000063192.15	ENSMUSG00000050640.17	Tmem150c	chr5	protein_coding	transmembrane protein 150C
chr5	100243555	100307227	-	100243555	100307325	A5SS	0.25	50	50	ENSMUST00000063192.15	ENSMUSG00000050640.17	Tmem150c	chr5	protein_coding	transmembrane protein 150C
chr5	100243555	100270494	-	100243555	100307227	A5SS	0.25	50	50	ENSMUST00000146731.8	ENSMUSG00000050640.17	Tmem150c	chr5	protein_coding	transmembrane protein 150C
chr5	100243555	100307078	-	100243555	100307227	A5SS	0.25	50	50	ENSMUST00000146731.8	ENSMUSG00000050640.17	Tmem150c	chr5	protein_coding	transmembrane protein 150C
chr5	100243555	100307078	-	100243555	100270494	5pMXE	0.25	50	50	ENSMUST00000124145.8	ENSMUSG00000050640.17	Tmem150c	chr5	protein_coding	transmembrane protein 150C
chr5	100240075	100240174	+	100240075	100240169	A3SS	0.5	50	50	ENSMUST00000143245.8	ENSMUSG00000086259.8	Tmem150cos	chr5	lncRNA	transmembrane protein 150C, opposite strand
chr5	100516211;100521574	100521284;100523067	-	100516211	100523067	cassetteExon	0.5	100	100	ENSMUST00000182569.2	ENSMUSG00000035325.17	Sec31a	chr5	protein_coding	Sec31 homolog A (S. cerevisiae)
chr5	100523190;100523912	100523820;100526687	-	100523190	100526687	cassetteExon	0.5	100	100	ENSMUST00000182569.2	ENSMUSG00000035325.17	Sec31a	chr5	protein_coding	Sec31 homolog A (S. cerevisiae)
chr5	100516211	100517455	-	100516211	100523067	A5SS	0.33	50	50	ENSMUST00000182569.2	ENSMUSG00000035325.17	Sec31a	chr5	protein_coding	Sec31 homolog A (S. cerevisiae)
chr5	100534062	100536927	-	100534062;100536470	100536393;100536927	ES	0.5	50	50	ENSMUST00000094578.11	ENSMUSG00000035325.17	Sec31a	chr5	protein_coding	Sec31 homolog A (S. cerevisiae)
chr5	100549619	100550074	-	100547348	100550074	A3SS	0.5	50	50	ENSMUST00000094578.11	ENSMUSG00000035325.17	Sec31a	chr5	protein_coding	Sec31 homolog A (S. cerevisiae)
chr5	100516211	100521284	-	100516211	100517455	A5SS&ES	0.33	50	50	ENSMUST00000094578.11	ENSMUSG00000035325.17	Sec31a	chr5	protein_coding	Sec31 homolog A (S. cerevisiae)
chr5	100517493	100521284	-	100517493	100521239	A5SS	0.5	50	50	ENSMUST00000094578.11	ENSMUSG00000035325.17	Sec31a	chr5	protein_coding	Sec31 homolog A (S. cerevisiae)
chr5	100516211	100521284	-	100516211;100517493	100517455;100521284	ES	0.5	50	50	ENSMUST00000182433.8	ENSMUSG00000035325.17	Sec31a	chr5	protein_coding	Sec31 homolog A (S. cerevisiae)
chr5	100534062;100536965	100536927;100538618	-	100534062	100538618	cassetteExon	0.5	100	100	ENSMUST00000182886.8	ENSMUSG00000035325.17	Sec31a	chr5	protein_coding	Sec31 homolog A (S. cerevisiae)
chr5	100534062	100536393	-	100534062	100538618	A5SS	0.33	50	50	ENSMUST00000182886.8	ENSMUSG00000035325.17	Sec31a	chr5	protein_coding	Sec31 homolog A (S. cerevisiae)
chr5	100607661;100617782	100617684;100623548	-	100607661	100623548	cassetteExon	0.5	100	100	ENSMUST00000239512.1	ENSMUSG00000118665.1	Lin54	chr5	protein_coding	--
chr5	100628180	100633662	-	100628180	100632999	A5SS	0.5	50	50	ENSMUST00000239512.1	ENSMUSG00000118665.1	Lin54	chr5	protein_coding	--
chr5	100633714	100646162	-	100633714	100648360	A5SS	0.5	50	50	ENSMUST00000239512.1	ENSMUSG00000118665.1	Lin54	chr5	protein_coding	--
chr5	100666416	100676405	+	100666416;100675919	100675840;100676405	ES	0.5	50	50	ENSMUST00000045993.15	ENSMUSG00000035297.15	Cops4	chr5	protein_coding	COP9 signalosome subunit 4
chr5	100666416;100671943	100671877;100675840	+	100666416	100675840	cassetteExon	0.5	100	100	ENSMUST00000045993.15	ENSMUSG00000035297.15	Cops4	chr5	protein_coding	COP9 signalosome subunit 4
chr5	100689518;100690192	100690153;100691705	+	100689518	100691705	cassetteExon	0.5	100	100	ENSMUST00000045993.15	ENSMUSG00000035297.15	Cops4	chr5	protein_coding	COP9 signalosome subunit 4
chr5	100666801	100675840	+	100666416	100675840	A5SS	0.33	50	50	ENSMUST00000045993.15	ENSMUSG00000035297.15	Cops4	chr5	protein_coding	COP9 signalosome subunit 4
chr5	100666416	100671877	+	100666416	100676405	A3SS	0.33	50	50	ENSMUST00000151414.8	ENSMUSG00000035297.15	Cops4	chr5	protein_coding	COP9 signalosome subunit 4
chr5	100666801	100675840	+	100671943	100675840	A5SS&ES	0.33	50	50	ENSMUST00000123069.2	ENSMUSG00000035297.15	Cops4	chr5	protein_coding	COP9 signalosome subunit 4
chr5	100710628	100710707	-	100710628	100720011	A5SS	0.5	50	50	ENSMUST00000031264.12	ENSMUSG00000029322.13	Plac8	chr5	protein_coding	placenta-specific 8
chr5	100811567	100821855	-	100811567;100815924	100815758;100821855	ES	0.33	50	50	ENSMUST00000031262.9	ENSMUSG00000029319.9	Coq2	chr5	protein_coding	coenzyme Q2 4-hydroxybenzoate polyprenyltransferase
chr5	100811694	100821855	-	100815924	100821855	A3SS&ES	0.33	50	50	ENSMUST00000031262.9	ENSMUSG00000029319.9	Coq2	chr5	protein_coding	coenzyme Q2 4-hydroxybenzoate polyprenyltransferase
chr5	100811567	100821855	-	100811694	100821855	A3SS	0.33	50	50	ENSMUST00000135146.2	ENSMUSG00000029319.9	Coq2	chr5	protein_coding	coenzyme Q2 4-hydroxybenzoate polyprenyltransferase
chr5	100811567	100822844	-	100811567	100821855	5pMXE	0.33	50	50	ENSMUST00000126981.2	ENSMUSG00000029319.9	Coq2	chr5	protein_coding	coenzyme Q2 4-hydroxybenzoate polyprenyltransferase
chr5	100811567	100815758	-	100811567	100822844	A5SS	0.33	50	50	ENSMUST00000127811.2	ENSMUSG00000029319.9	Coq2	chr5	protein_coding	coenzyme Q2 4-hydroxybenzoate polyprenyltransferase
chr5	100939843	100944220	-	100939843;100940708	100940530;100944220	ES	0.5	50	50	ENSMUST00000044684.14	ENSMUSG00000035266.17	Helq	chr5	protein_coding	helicase, POLQ-like
chr5	100916565	100918264	-	100916321	100918264	A3SS	0.33	50	50	ENSMUST00000044684.14	ENSMUSG00000035266.17	Helq	chr5	protein_coding	helicase, POLQ-like
chr5	100934948	100937992	-	100934948	100938005	A5SS	0.5	50	50	ENSMUST00000044684.14	ENSMUSG00000035266.17	Helq	chr5	protein_coding	helicase, POLQ-like
chr5	100916321	100918264	-	100912941	100918264	A3SS	0.33	50	50	ENSMUST00000133845.8	ENSMUSG00000035266.17	Helq	chr5	protein_coding	helicase, POLQ-like
chr5	100916565	100918264	-	100912941	100918264	A3SS	0.33	50	50	ENSMUST00000133845.8	ENSMUSG00000035266.17	Helq	chr5	protein_coding	helicase, POLQ-like
chr5	100912941	100914554	-	100912941	100918264	A5SS	0.5	50	50	ENSMUST00000133845.8	ENSMUSG00000035266.17	Helq	chr5	protein_coding	helicase, POLQ-like
chr5	100939843	100944220	-	100939843	100940530	5pMXE	0.5	50	50	ENSMUST00000198409.5	ENSMUSG00000035266.17	Helq	chr5	protein_coding	helicase, POLQ-like
chr5	100946726	100949774	+	100946726;100947479	100947418;100949774	ES	0.5	50	50	ENSMUST00000016977.15	ENSMUSG00000016833.15	Mrps18c	chr5	protein_coding	mitochondrial ribosomal protein S18C
chr5	100949857	100951836	+	100949857;100950976	100950919;100951836	ES	0.5	50	50	ENSMUST00000016977.15	ENSMUSG00000016833.15	Mrps18c	chr5	protein_coding	mitochondrial ribosomal protein S18C
chr5	100946726	100949774	+	100946726	100947418	3pMXE	0.5	50	50	ENSMUST00000140296.2	ENSMUSG00000016833.15	Mrps18c	chr5	protein_coding	mitochondrial ribosomal protein S18C
chr5	100963094;100966473	100966383;100968697	-	100963094;100965864	100965828;100968697	MXE	0.5	100	100	ENSMUST00000153302.8	ENSMUSG00000035234.19	Abraxas1	chr5	protein_coding	BRCA1 A complex subunit
chr5	100965864;100966473	100966383;100968697	-	100965864	100968697	cassetteExon	0.5	100	100	ENSMUST00000153302.8	ENSMUSG00000035234.19	Abraxas1	chr5	protein_coding	BRCA1 A complex subunit
chr5	100954756	100955741	-	100954756	100957420	A5SS	0.33	50	50	ENSMUST00000153302.8	ENSMUSG00000035234.19	Abraxas1	chr5	protein_coding	BRCA1 A complex subunit
chr5	100954756	100957425	-	100954756	100957420	A5SS	0.33	50	50	ENSMUST00000153302.8	ENSMUSG00000035234.19	Abraxas1	chr5	protein_coding	BRCA1 A complex subunit
chr5	100963094	100966383	-	100963094;100965864	100965828;100966383	ES	0.5	50	50	ENSMUST00000200657.5	ENSMUSG00000035234.19	Abraxas1	chr5	protein_coding	BRCA1 A complex subunit
chr5	100954756;100955805	100955741;100957425	-	100954756	100957425	cassetteExon	0.5	100	100	ENSMUST00000200657.5	ENSMUSG00000035234.19	Abraxas1	chr5	protein_coding	BRCA1 A complex subunit
chr5	100963094	100966383	-	100965864	100966383	3pMXE	0.5	50	50	ENSMUST00000145707.2	ENSMUSG00000035234.19	Abraxas1	chr5	protein_coding	BRCA1 A complex subunit
chr5	100965864	100968697	-	100966473	100968697	3pMXE	0.5	50	50	ENSMUST00000131857.2	ENSMUSG00000035234.19	Abraxas1	chr5	protein_coding	BRCA1 A complex subunit
chr5	100994227	100994521	+	100993813	100994521	A5SS	0.33	50	50	ENSMUST00000144623.2	ENSMUSG00000029314.15	Gpat3	chr5	protein_coding	glycerol-3-phosphate acyltransferase 3
chr5	100994423	100994521	+	100993813	100994521	A5SS	0.33	50	50	ENSMUST00000144623.2	ENSMUSG00000029314.15	Gpat3	chr5	protein_coding	glycerol-3-phosphate acyltransferase 3
chr5	100994227	100994521	+	100994227;100994423	100994338;100994521	ES	0.5	50	50	ENSMUST00000112887.8	ENSMUSG00000029314.15	Gpat3	chr5	protein_coding	glycerol-3-phosphate acyltransferase 3
chr5	100994227	100994521	+	100994423	100994521	5pMXE	0.33	50	50	ENSMUST00000145612.2	ENSMUSG00000029314.15	Gpat3	chr5	protein_coding	glycerol-3-phosphate acyltransferase 3
chr5	101954487	101956532	+	101954487	101960361	A3SS	0.5	50	50	ENSMUST00000132213.2	ENSMUSG00000029330.9	Cds1	chr5	protein_coding	CDP-diacylglycerol synthase 1
chr5	101957839	101960361	+	101954487	101960361	A5SS	0.5	50	50	ENSMUST00000132213.2	ENSMUSG00000029330.9	Cds1	chr5	protein_coding	CDP-diacylglycerol synthase 1
chr5	102078871	102085148	-	102078871;102083939	102083856;102085148	ES	0.33	50	50	ENSMUST00000053177.14	ENSMUSG00000043940.16	Wdfy3	chr5	protein_coding	WD repeat and FYVE domain containing 3
chr5	102023875;102025925	102025872;102030289	-	102023875	102030289	cassetteExon	0.5	100	100	ENSMUST00000053177.14	ENSMUSG00000043940.16	Wdfy3	chr5	protein_coding	WD repeat and FYVE domain containing 3
chr5	102034936	102035953	-	102034933	102035953	A3SS	0.5	50	50	ENSMUST00000053177.14	ENSMUSG00000043940.16	Wdfy3	chr5	protein_coding	WD repeat and FYVE domain containing 3
chr5	102071969	102074290	-	102071953	102074290	A3SS	0.5	50	50	ENSMUST00000053177.14	ENSMUSG00000043940.16	Wdfy3	chr5	protein_coding	WD repeat and FYVE domain containing 3
chr5	102083255	102085148	-	102083939	102085148	A3SS&ES	0.33	50	50	ENSMUST00000053177.14	ENSMUSG00000043940.16	Wdfy3	chr5	protein_coding	WD repeat and FYVE domain containing 3
chr5	102046427	102047925	-	102046427	102047880	A5SS	0.5	50	50	ENSMUST00000053177.14	ENSMUSG00000043940.16	Wdfy3	chr5	protein_coding	WD repeat and FYVE domain containing 3
chr5	102083255	102085148	-	102078871	102085148	A3SS	0.33	50	50	ENSMUST00000174698.2	ENSMUSG00000043940.16	Wdfy3	chr5	protein_coding	WD repeat and FYVE domain containing 3
chr5	101989709	101989837	+	101989709	101993078	A3SS	0.25	50	50	ENSMUST00000173528.8	ENSMUSG00000092354.8	Gm20548	chr5	lncRNA	predicted gene 20548
chr5	101989709	101991750	+	101989709	101993078	A3SS	0.25	50	50	ENSMUST00000173528.8	ENSMUSG00000092354.8	Gm20548	chr5	lncRNA	predicted gene 20548
chr5	101989709	101992917	+	101989709	101993078	A3SS	0.25	50	50	ENSMUST00000173528.8	ENSMUSG00000092354.8	Gm20548	chr5	lncRNA	predicted gene 20548
chr5	101985424	101989617	+	101985376	101989617	A5SS	0.33	50	50	ENSMUST00000173528.8	ENSMUSG00000092354.8	Gm20548	chr5	lncRNA	predicted gene 20548
chr5	101988097	101989617	+	101985376	101989617	A5SS	0.33	50	50	ENSMUST00000173528.8	ENSMUSG00000092354.8	Gm20548	chr5	lncRNA	predicted gene 20548
chr5	101989709	101991750	+	101989709;101989939	101989837;101991750	ES	0.5	50	50	ENSMUST00000173965.8	ENSMUSG00000092354.8	Gm20548	chr5	lncRNA	predicted gene 20548
chr5	101988097	101989617	+	101985424	101989617	A5SS	0.33	50	50	ENSMUST00000173965.8	ENSMUSG00000092354.8	Gm20548	chr5	lncRNA	predicted gene 20548
chr5	101989709	101991750	+	101989939	101991750	A5SS	0.5	50	50	ENSMUST00000174864.2	ENSMUSG00000092354.8	Gm20548	chr5	lncRNA	predicted gene 20548
chr5	101989709	101989837	+	101989709	101992917	A3SS	0.25	50	50	ENSMUST00000174528.8	ENSMUSG00000092354.8	Gm20548	chr5	lncRNA	predicted gene 20548
chr5	101989709	101991750	+	101989709	101992917	A3SS	0.25	50	50	ENSMUST00000174528.8	ENSMUSG00000092354.8	Gm20548	chr5	lncRNA	predicted gene 20548
chr5	102629728;102700185	102699992;102811949	+	102629728	102811949	cassetteExon	0.5	100	100	ENSMUST00000073302.12	ENSMUSG00000057315.15	Arhgap24	chr5	protein_coding	Rho GTPase activating protein 24
chr5	102873099	102989156	+	102812036	102989156	A5SS	0.25	50	50	ENSMUST00000073302.12	ENSMUSG00000057315.15	Arhgap24	chr5	protein_coding	Rho GTPase activating protein 24
chr5	102916827	102989156	+	102812036	102989156	A5SS	0.25	50	50	ENSMUST00000073302.12	ENSMUSG00000057315.15	Arhgap24	chr5	protein_coding	Rho GTPase activating protein 24
chr5	102957049	102989156	+	102812036	102989156	A5SS	0.25	50	50	ENSMUST00000073302.12	ENSMUSG00000057315.15	Arhgap24	chr5	protein_coding	Rho GTPase activating protein 24
chr5	102994035	103008196	+	102989278	103008196	A5SS	0.5	50	50	ENSMUST00000073302.12	ENSMUSG00000057315.15	Arhgap24	chr5	protein_coding	Rho GTPase activating protein 24
chr5	102629728	102811949	+	102629729	102811949	A5SS	0.33	50	50	ENSMUST00000112854.8	ENSMUSG00000057315.15	Arhgap24	chr5	protein_coding	Rho GTPase activating protein 24
chr5	102700185	102811949	+	102629729	102811949	A5SS	0.33	50	50	ENSMUST00000112854.8	ENSMUSG00000057315.15	Arhgap24	chr5	protein_coding	Rho GTPase activating protein 24
chr5	102916827	102989156	+	102873099	102989156	A5SS	0.25	50	50	ENSMUST00000112853.8	ENSMUSG00000057315.15	Arhgap24	chr5	protein_coding	Rho GTPase activating protein 24
chr5	102957049	102989156	+	102873099	102989156	A5SS	0.25	50	50	ENSMUST00000112853.8	ENSMUSG00000057315.15	Arhgap24	chr5	protein_coding	Rho GTPase activating protein 24
chr5	102957049	102989156	+	102916827	102989156	A5SS	0.25	50	50	ENSMUST00000112852.8	ENSMUSG00000057315.15	Arhgap24	chr5	protein_coding	Rho GTPase activating protein 24
chr5	103138508	103144450	-	103138508;103139793	103139735;103144450	ES	0.5	50	50	ENSMUST00000170792.9	ENSMUSG00000046709.19	Mapk10	chr5	protein_coding	mitogen-activated protein kinase 10
chr5	103114494;103124292	103124221;103137486	-	103114494;103135140	103135069;103137486	MXE	0.5	100	100	ENSMUST00000170792.9	ENSMUSG00000046709.19	Mapk10	chr5	protein_coding	mitogen-activated protein kinase 10
chr5	103069003	103073938	-	103061193	103073938	A3SS	0.5	50	50	ENSMUST00000170792.9	ENSMUSG00000046709.19	Mapk10	chr5	protein_coding	mitogen-activated protein kinase 10
chr5	103310228	103353692	-	103206258	103353692	A3SS	0.5	50	50	ENSMUST00000170792.9	ENSMUSG00000046709.19	Mapk10	chr5	protein_coding	mitogen-activated protein kinase 10
chr5	103144579	103174584	-	103144579	103186385	A5SS	0.5	50	50	ENSMUST00000170792.9	ENSMUSG00000046709.19	Mapk10	chr5	protein_coding	mitogen-activated protein kinase 10
chr5	103206258	103247823	-	103206258	103353692	A5SS	0.5	50	50	ENSMUST00000170792.9	ENSMUSG00000046709.19	Mapk10	chr5	protein_coding	mitogen-activated protein kinase 10
chr5	103353806	103356732	-	103353806	103358756	A5SS	0.5	50	50	ENSMUST00000170792.9	ENSMUSG00000046709.19	Mapk10	chr5	protein_coding	mitogen-activated protein kinase 10
chr5	103640176;103644271	103644189;103649233	+	103640176	103649233	cassetteExon	0.5	100	100	ENSMUST00000199412.5	ENSMUSG00000034573.15	Ptpn13	chr5	protein_coding	protein tyrosine phosphatase, non-receptor type 13
chr5	103665435	103671433	+	103665435	103671436	A3SS	0.5	50	50	ENSMUST00000199412.5	ENSMUSG00000034573.15	Ptpn13	chr5	protein_coding	protein tyrosine phosphatase, non-receptor type 13
chr5	103797438	103802788	-	103797442	103802788	A3SS	0.5	50	50	ENSMUST00000119824.8	ENSMUSG00000029320.12	1700016H13Rik	chr5	protein_coding	RIKEN cDNA 1700016H13 gene
chr5	103802922	103803311	-	103802922	103803636	A5SS	0.25	50	50	ENSMUST00000119824.8	ENSMUSG00000029320.12	1700016H13Rik	chr5	protein_coding	RIKEN cDNA 1700016H13 gene
chr5	103802922	103803452	-	103802922	103803636	A5SS	0.25	50	50	ENSMUST00000119824.8	ENSMUSG00000029320.12	1700016H13Rik	chr5	protein_coding	RIKEN cDNA 1700016H13 gene
chr5	103802922	103803470	-	103802922	103803636	A5SS	0.25	50	50	ENSMUST00000119824.8	ENSMUSG00000029320.12	1700016H13Rik	chr5	protein_coding	RIKEN cDNA 1700016H13 gene
chr5	103802922	103803452	-	103802922	103803311	A5SS	0.25	50	50	ENSMUST00000134926.8	ENSMUSG00000029320.12	1700016H13Rik	chr5	protein_coding	RIKEN cDNA 1700016H13 gene
chr5	103802922	103803470	-	103802922	103803311	A5SS	0.25	50	50	ENSMUST00000134926.8	ENSMUSG00000029320.12	1700016H13Rik	chr5	protein_coding	RIKEN cDNA 1700016H13 gene
chr5	103802922	103803452	-	103802922	103803470	A5SS	0.25	50	50	ENSMUST00000120108.8	ENSMUSG00000029320.12	1700016H13Rik	chr5	protein_coding	RIKEN cDNA 1700016H13 gene
chr5	103902211	103930990	+	103863271	103930990	A5SS	0.33	50	50	ENSMUST00000126335.2	ENSMUSG00000029313.19	Aff1	chr5	protein_coding	AF4/FMR2 family, member 1
chr5	103902611	103930990	+	103863271	103930990	A5SS	0.33	50	50	ENSMUST00000126335.2	ENSMUSG00000029313.19	Aff1	chr5	protein_coding	AF4/FMR2 family, member 1
chr5	103902611	103930990	+	103902211	103930990	A5SS	0.33	50	50	ENSMUST00000054979.10	ENSMUSG00000029313.19	Aff1	chr5	protein_coding	AF4/FMR2 family, member 1
chr5	104020040	104033773	-	104020040;104022255	104022069;104033773	ES	0.25	50	50	ENSMUST00000112811.8	ENSMUSG00000029312.13	Klhl8	chr5	protein_coding	kelch-like 8
chr5	104022255;104023927	104023607;104033773	-	104022255	104033773	cassetteExon	0.5	100	100	ENSMUST00000112811.8	ENSMUSG00000029312.13	Klhl8	chr5	protein_coding	kelch-like 8
chr5	104024155	104033773	-	104022255	104033773	A3SS	0.25	50	50	ENSMUST00000112811.8	ENSMUSG00000029312.13	Klhl8	chr5	protein_coding	kelch-like 8
chr5	104024155	104033773	-	104023927	104033773	A3SS	0.25	50	50	ENSMUST00000112815.8	ENSMUSG00000029312.13	Klhl8	chr5	protein_coding	kelch-like 8
chr5	104022255	104033773	-	104022255;104024155	104023607;104033773	ES	0.25	50	50	ENSMUST00000031254.9	ENSMUSG00000029312.13	Klhl8	chr5	protein_coding	kelch-like 8
chr5	104023927	104033773	-	104020040	104033773	A3SS	0.25	50	50	ENSMUST00000131843.2	ENSMUSG00000029312.13	Klhl8	chr5	protein_coding	kelch-like 8
chr5	104024155	104033773	-	104020040	104033773	A3SS	0.25	50	50	ENSMUST00000131843.2	ENSMUSG00000029312.13	Klhl8	chr5	protein_coding	kelch-like 8
chr5	104020040	104033773	-	104020040	104022069	5pMXE	0.5	50	50	ENSMUST00000147184.2	ENSMUSG00000029312.13	Klhl8	chr5	protein_coding	kelch-like 8
chr5	104118759	104124972	-	104118759;104120540	104120433;104124972	ES	0.5	50	50	ENSMUST00000048118.15	ENSMUSG00000034528.16	Hsd17b13	chr5	protein_coding	hydroxysteroid (17-beta) dehydrogenase 13
chr5	104111729	104113641	-	104104152	104113641	A3SS	0.5	50	50	ENSMUST00000048118.15	ENSMUSG00000034528.16	Hsd17b13	chr5	protein_coding	hydroxysteroid (17-beta) dehydrogenase 13
chr5	104195012	104198444	+	104194704	104198444	A5SS	0.25	50	50	ENSMUST00000128511.8	ENSMUSG00000029310.14	Nudt9	chr5	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 9
chr5	104195249	104198444	+	104194704	104198444	A5SS	0.25	50	50	ENSMUST00000128511.8	ENSMUSG00000029310.14	Nudt9	chr5	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 9
chr5	104195596	104198444	+	104194704	104198444	A5SS	0.25	50	50	ENSMUST00000128511.8	ENSMUSG00000029310.14	Nudt9	chr5	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 9
chr5	104195249	104198444	+	104195012	104198444	A5SS	0.25	50	50	ENSMUST00000031250.14	ENSMUSG00000029310.14	Nudt9	chr5	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 9
chr5	104195596	104198444	+	104195012	104198444	A5SS	0.25	50	50	ENSMUST00000031250.14	ENSMUSG00000029310.14	Nudt9	chr5	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 9
chr5	104195596	104198444	+	104195249	104198444	A5SS	0.25	50	50	ENSMUST00000134313.8	ENSMUSG00000029310.14	Nudt9	chr5	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 9
chr5	104224497	104225425	-	104224453	104225425	A3SS	0.5	50	50	ENSMUST00000164471.8	ENSMUSG00000091034.9	Gm17660	chr5	protein_coding	predicted gene, 17660
chr5	104245639;104250283	104250106;104261243	-	104245639	104261243	cassetteExon	0.5	100	100	ENSMUST00000031249.8	ENSMUSG00000029309.8	Sparcl1	chr5	protein_coding	SPARC-like 1
chr5	104584442	104585521	+	104584442;104584769	104584767;104585521	ES	0.5	50	50	ENSMUST00000086833.13	ENSMUSG00000029304.15	Spp1	chr5	protein_coding	secreted phosphoprotein 1
chr5	104583062	104584132	+	104583062	104584241	A3SS	0.33	50	50	ENSMUST00000086833.13	ENSMUSG00000029304.15	Spp1	chr5	protein_coding	secreted phosphoprotein 1
chr5	104583062	104584138	+	104583062	104584241	A3SS	0.33	50	50	ENSMUST00000086833.13	ENSMUSG00000029304.15	Spp1	chr5	protein_coding	secreted phosphoprotein 1
chr5	104583114	104584241	+	104583062	104584241	A5SS	0.5	50	50	ENSMUST00000086833.13	ENSMUSG00000029304.15	Spp1	chr5	protein_coding	secreted phosphoprotein 1
chr5	104583114	104584138	+	104583114	104584241	A3SS	0.5	50	50	ENSMUST00000112748.8	ENSMUSG00000029304.15	Spp1	chr5	protein_coding	secreted phosphoprotein 1
chr5	104583062	104584132	+	104583062	104584138	A3SS	0.33	50	50	ENSMUST00000112746.8	ENSMUSG00000029304.15	Spp1	chr5	protein_coding	secreted phosphoprotein 1
chr5	104583114	104584138	+	104583062	104584138	A5SS	0.5	50	50	ENSMUST00000112746.8	ENSMUSG00000029304.15	Spp1	chr5	protein_coding	secreted phosphoprotein 1
chr5	104637280	104637864	+	104637280	104638510	A3SS	0.5	50	50	ENSMUST00000086831.4	ENSMUSG00000034462.10	Pkd2	chr5	protein_coding	polycystin 2, transient receptor potential cation channel
chr5	104689128;104697556	104697452;104698752	+	104689128	104698752	cassetteExon	0.5	100	100	ENSMUST00000239420.2	ENSMUSG00000097392.5	Thoc2l	chr5	protein_coding	THO complex subunit 2-like
chr5	104689128;104698590	104698511;104698752	+	104689128	104698752	cassetteExon	0.5	100	100	ENSMUST00000239420.2	ENSMUSG00000097392.5	Thoc2l	chr5	protein_coding	THO complex subunit 2-like
chr5	104683531	104686692	+	104673838	104686692	A5SS	0.5	50	50	ENSMUST00000239420.2	ENSMUSG00000097392.5	Thoc2l	chr5	protein_coding	THO complex subunit 2-like
chr5	104689128;104698590	104698511;104698752	+	104689128;104697556	104697452;104698752	MXE	0.5	100	100	ENSMUST00000239307.3	ENSMUSG00000097392.5	Thoc2l	chr5	protein_coding	THO complex subunit 2-like
chr5	104985381	105007533	-	104965218	105007533	A3SS	0.5	50	50	ENSMUST00000186219.7	ENSMUSG00000072774.11	Zfp951	chr5	protein_coding	zinc finger protein 951
chr5	104965218	104976794	-	104965218	105007533	A5SS	0.5	50	50	ENSMUST00000186219.7	ENSMUSG00000072774.11	Zfp951	chr5	protein_coding	zinc finger protein 951
chr5	105099507	105109043	-	105099507;105101039	105100950;105109043	ES	0.5	50	50	ENSMUST00000031239.13	ENSMUSG00000029299.15	Abcg3	chr5	protein_coding	ATP binding cassette subfamily G member 3
chr5	105084484	105086049	-	105083969	105086049	A3SS	0.5	50	50	ENSMUST00000031239.13	ENSMUSG00000029299.15	Abcg3	chr5	protein_coding	ATP binding cassette subfamily G member 3
chr5	105166708	105178695	-	105166708	105169787	5pMXE	0.5	50	50	ENSMUST00000199483.5	ENSMUSG00000034438.17	Gbp8	chr5	protein_coding	guanylate-binding protein 8
chr5	105198937	105287346	-	105198937	105201367	5pMXE	0.5	50	50	ENSMUST00000198326.2	ENSMUSG00000034438.17	Gbp8	chr5	protein_coding	guanylate-binding protein 8
chr5	105176464	105178695	-	105166708	105178695	A3SS	0.5	50	50	ENSMUST00000031235.13	ENSMUSG00000034438.17	Gbp8	chr5	protein_coding	guanylate-binding protein 8
chr5	105253737	105287346	-	105198937	105287346	A3SS	0.2	50	50	ENSMUST00000031235.13	ENSMUSG00000034438.17	Gbp8	chr5	protein_coding	guanylate-binding protein 8
chr5	105283056	105287346	-	105198937	105287346	A3SS	0.2	50	50	ENSMUST00000031235.13	ENSMUSG00000034438.17	Gbp8	chr5	protein_coding	guanylate-binding protein 8
chr5	105284911	105287346	-	105198937	105287346	A3SS	0.2	50	50	ENSMUST00000031235.13	ENSMUSG00000034438.17	Gbp8	chr5	protein_coding	guanylate-binding protein 8
chr5	105286683	105287346	-	105198937	105287346	A3SS	0.2	50	50	ENSMUST00000031235.13	ENSMUSG00000034438.17	Gbp8	chr5	protein_coding	guanylate-binding protein 8
chr5	105253737	105287346	-	105253737	105258071	5pMXE	0.5	50	50	ENSMUST00000031238.13	ENSMUSG00000029298.16	Gbp9	chr5	protein_coding	guanylate-binding protein 9
chr5	105228130;105228557	105228489;105228996	-	105228130	105228996	cassetteExon	0.5	100	100	ENSMUST00000031238.13	ENSMUSG00000029298.16	Gbp9	chr5	protein_coding	guanylate-binding protein 9
chr5	105283056	105287346	-	105253737	105287346	A3SS	0.25	50	50	ENSMUST00000100961.5	ENSMUSG00000029298.16	Gbp9	chr5	protein_coding	guanylate-binding protein 9
chr5	105284911	105287346	-	105253737	105287346	A3SS	0.25	50	50	ENSMUST00000100961.5	ENSMUSG00000029298.16	Gbp9	chr5	protein_coding	guanylate-binding protein 9
chr5	105286683	105287346	-	105253737	105287346	A3SS	0.25	50	50	ENSMUST00000100961.5	ENSMUSG00000029298.16	Gbp9	chr5	protein_coding	guanylate-binding protein 9
chr5	105283056	105287346	-	105283056;105284911	105284705;105287346	ES	0.33	50	50	ENSMUST00000196204.5	ENSMUSG00000079363.8	Gbp4	chr5	protein_coding	guanylate binding protein 4
chr5	105284911;105286683	105286585;105287346	-	105284911	105287346	cassetteExon	0.5	100	100	ENSMUST00000196204.5	ENSMUSG00000079363.8	Gbp4	chr5	protein_coding	guanylate binding protein 4
chr5	105273616	105282933	-	105273492	105282933	A3SS	0.5	50	50	ENSMUST00000196204.5	ENSMUSG00000079363.8	Gbp4	chr5	protein_coding	guanylate binding protein 4
chr5	105283056	105284676	-	105283056	105284705	A5SS	0.33	50	50	ENSMUST00000196204.5	ENSMUSG00000079363.8	Gbp4	chr5	protein_coding	guanylate binding protein 4
chr5	105283056	105287346	-	105283056;105284911	105284676;105287346	ES	0.33	50	50	ENSMUST00000100962.8	ENSMUSG00000079363.8	Gbp4	chr5	protein_coding	guanylate binding protein 4
chr5	105286683	105287346	-	105283056	105287346	A3SS	0.33	50	50	ENSMUST00000196677.5	ENSMUSG00000079363.8	Gbp4	chr5	protein_coding	guanylate binding protein 4
chr5	105283056	105287346	-	105284911	105287346	A3SS	0.2	50	50	ENSMUST00000198278.2	ENSMUSG00000079363.8	Gbp4	chr5	protein_coding	guanylate binding protein 4
chr5	105428430	105438703	-	105428430;105436920	105436793;105438703	ES	0.5	50	50	ENSMUST00000050011.10	ENSMUSG00000079362.6	Gm43302	chr5	protein_coding	predicted gene 43302
chr5	105421153	105422053	-	105365356	105422053	A3SS	0.5	50	50	ENSMUST00000050011.10	ENSMUSG00000079362.6	Gm43302	chr5	protein_coding	predicted gene 43302
chr5	105365356	105366253	-	105365356	105422053	A5SS	0.5	50	50	ENSMUST00000050011.10	ENSMUSG00000079362.6	Gm43302	chr5	protein_coding	predicted gene 43302
chr5	105667496;105670617	105670496;105692066	+	105667496	105692066	cassetteExon	0.5	100	100	ENSMUST00000067924.13	ENSMUSG00000054720.13	Lrrc8c	chr5	protein_coding	leucine rich repeat containing 8 family, member C
chr5	105706909	105727334	+	105692136	105727334	A5SS	0.5	50	50	ENSMUST00000067924.13	ENSMUSG00000054720.13	Lrrc8c	chr5	protein_coding	leucine rich repeat containing 8 family, member C
chr5	105880240	105978233	+	105880240	105959590	3pMXE	0.5	50	50	ENSMUST00000060531.16	ENSMUSG00000046079.17	Lrrc8d	chr5	protein_coding	leucine rich repeat containing 8D
chr5	105848951	105880096	+	105848120	105880096	A5SS	0.25	50	50	ENSMUST00000060531.16	ENSMUSG00000046079.17	Lrrc8d	chr5	protein_coding	leucine rich repeat containing 8D
chr5	105879361	105880096	+	105848120	105880096	A5SS	0.25	50	50	ENSMUST00000060531.16	ENSMUSG00000046079.17	Lrrc8d	chr5	protein_coding	leucine rich repeat containing 8D
chr5	105879877	105880096	+	105848120	105880096	A5SS	0.25	50	50	ENSMUST00000060531.16	ENSMUSG00000046079.17	Lrrc8d	chr5	protein_coding	leucine rich repeat containing 8D
chr5	105848951	105876589	+	105848951	105880096	A3SS	0.5	50	50	ENSMUST00000120847.8	ENSMUSG00000046079.17	Lrrc8d	chr5	protein_coding	leucine rich repeat containing 8D
chr5	105879361	105880096	+	105848951	105880096	A5SS	0.25	50	50	ENSMUST00000120847.8	ENSMUSG00000046079.17	Lrrc8d	chr5	protein_coding	leucine rich repeat containing 8D
chr5	105879877	105880096	+	105848951	105880096	A5SS	0.25	50	50	ENSMUST00000120847.8	ENSMUSG00000046079.17	Lrrc8d	chr5	protein_coding	leucine rich repeat containing 8D
chr5	105879877	105880096	+	105879361	105880096	A5SS	0.25	50	50	ENSMUST00000156630.8	ENSMUSG00000046079.17	Lrrc8d	chr5	protein_coding	leucine rich repeat containing 8D
chr5	105977469	105978233	+	105880240	105978233	A5SS	0.5	50	50	ENSMUST00000140081.8	ENSMUSG00000046079.17	Lrrc8d	chr5	protein_coding	leucine rich repeat containing 8D
chr5	106034294	106036300	+	106034294	106036567	A3SS	0.5	50	50	ENSMUST00000150440.8	ENSMUSG00000029290.13	Zfp326	chr5	protein_coding	zinc finger protein 326
chr5	106026386	106026615	+	106024564	106026615	A5SS	0.5	50	50	ENSMUST00000150440.8	ENSMUSG00000029290.13	Zfp326	chr5	protein_coding	zinc finger protein 326
chr5	106034142	106038984	+	106036705	106038984	A5SS&ES	0.5	50	50	ENSMUST00000150440.8	ENSMUSG00000029290.13	Zfp326	chr5	protein_coding	zinc finger protein 326
chr5	106705922	106722454	-	106659282	106722454	A3SS	0.5	50	50	ENSMUST00000131029.2	ENSMUSG00000099061.2	Gm28050	chr5	lncRNA	predicted gene, 28050
chr5	106705922	106767406	-	106705922	106722454	5pMXE	0.5	50	50	ENSMUST00000124394.3	ENSMUSG00000099061.2	Gm28050	chr5	lncRNA	predicted gene, 28050
chr5	106767508;106814711	106814651;106844398	-	106767508	106844398	cassetteExon	0.5	100	100	ENSMUST00000149128.3	ENSMUSG00000098302.2	Gm28039	chr5	lncRNA	predicted gene, 28039
chr5	106766294	106767406	-	106705922	106767406	A3SS	0.5	50	50	ENSMUST00000149128.3	ENSMUSG00000098302.2	Gm28039	chr5	lncRNA	predicted gene, 28039
chr5	106786501	106844398	-	106767508	106844398	A3SS	0.16	50	50	ENSMUST00000149128.3	ENSMUSG00000098302.2	Gm28039	chr5	lncRNA	predicted gene, 28039
chr5	106829879	106844398	-	106767508	106844398	A3SS	0.16	50	50	ENSMUST00000149128.3	ENSMUSG00000098302.2	Gm28039	chr5	lncRNA	predicted gene, 28039
chr5	106838743	106844398	-	106767508	106844398	A3SS	0.16	50	50	ENSMUST00000149128.3	ENSMUSG00000098302.2	Gm28039	chr5	lncRNA	predicted gene, 28039
chr5	106843565	106844398	-	106767508	106844398	A3SS	0.16	50	50	ENSMUST00000149128.3	ENSMUSG00000098302.2	Gm28039	chr5	lncRNA	predicted gene, 28039
chr5	106767508	106771951	-	106767508	106844398	A5SS	0.25	50	50	ENSMUST00000149128.3	ENSMUSG00000098302.2	Gm28039	chr5	lncRNA	predicted gene, 28039
chr5	106767508	106782697	-	106767508	106844398	A5SS	0.25	50	50	ENSMUST00000149128.3	ENSMUSG00000098302.2	Gm28039	chr5	lncRNA	predicted gene, 28039
chr5	106786501	106844398	-	106786501;106814711	106814651;106844398	ES	0.16	50	50	ENSMUST00000112696.8	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106814711;106829879	106829770;106844398	-	106814711	106844398	cassetteExon	0.5	100	100	ENSMUST00000112696.8	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106786501;106838743	106838537;106844398	-	106786501;106814711	106814651;106844398	MXE	0.5	100	100	ENSMUST00000112696.8	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106843565	106844398	-	106814711	106844398	A3SS	0.16	50	50	ENSMUST00000112696.8	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106767508	106771951	-	106767508	106782697	A5SS	0.25	50	50	ENSMUST00000112696.8	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106814711	106815382	-	106814711	106844398	A5SS	0.16	50	50	ENSMUST00000112696.8	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106814711	106827546	-	106814711	106844398	A5SS	0.16	50	50	ENSMUST00000112696.8	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106814711	106843664	-	106814711	106844398	A5SS	0.16	50	50	ENSMUST00000112696.8	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106814711	106844100	-	106814711	106844398	A5SS	0.16	50	50	ENSMUST00000112696.8	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106814711	106844100	-	106814711	106843664	5pMXE	0.16	50	50	ENSMUST00000045466.14	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106843565	106843664	-	106814711	106843664	A3SS	0.5	50	50	ENSMUST00000045466.14	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106786501	106838537	-	106786501	106814651	A5SS&ES	0.5	50	50	ENSMUST00000045466.14	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106814711	106815382	-	106814711	106843664	A5SS	0.16	50	50	ENSMUST00000045466.14	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106814711	106827546	-	106814711	106843664	A5SS	0.16	50	50	ENSMUST00000045466.14	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106814711	106829770	-	106814711	106843664	A5SS	0.16	50	50	ENSMUST00000045466.14	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106786501	106814651	-	106767508	106814651	A3SS	0.5	50	50	ENSMUST00000112695.4	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106786501	106844398	-	106814711	106844398	A3SS&ES	0.16	50	50	ENSMUST00000112695.4	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106838743	106844398	-	106814711	106844398	A3SS	0.16	50	50	ENSMUST00000112695.4	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106767508	106771951	-	106767508	106814651	A5SS	0.25	50	50	ENSMUST00000112695.4	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106767508	106782697	-	106767508	106814651	A5SS	0.25	50	50	ENSMUST00000112695.4	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106838743	106844398	-	106838743;106843565	106843509;106844398	ES	0.2	50	50	ENSMUST00000127434.8	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106843565	106845088	-	106843565	106844398	5pMXE	0.25	50	50	ENSMUST00000127434.8	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106814711;106827609	106827546;106829770	-	106814711	106829770	cassetteExon	0.5	100	100	ENSMUST00000127434.8	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106814711	106815382	-	106814711	106829770	A5SS	0.16	50	50	ENSMUST00000127434.8	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106814711	106844100	-	106814711	106829770	A5SS&ES	0.16	50	50	ENSMUST00000127434.8	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106838743	106843003	-	106838743	106843509	A5SS	0.33	50	50	ENSMUST00000127434.8	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106843565	106843664	-	106843565	106844398	A5SS	0.25	50	50	ENSMUST00000127434.8	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106843565	106844100	-	106843565	106844398	A5SS	0.25	50	50	ENSMUST00000127434.8	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106843565	106844100	-	106814711	106844100	A3SS	0.5	50	50	ENSMUST00000137285.8	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106786501	106844398	-	106786501	106814651	A5SS&ES	0.33	50	50	ENSMUST00000137285.8	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106814711	106815382	-	106814711	106844100	A5SS	0.16	50	50	ENSMUST00000137285.8	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106814711	106827546	-	106814711	106844100	A5SS	0.16	50	50	ENSMUST00000137285.8	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106814711	106827546	-	106814711	106815382	5pMXE	0.16	50	50	ENSMUST00000122980.8	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106786501;106838743	106838537;106844398	-	106786501	106844398	cassetteExon	0.5	100	100	ENSMUST00000155495.8	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106829879	106844398	-	106786501	106844398	A3SS	0.16	50	50	ENSMUST00000155495.8	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106843565	106844398	-	106786501	106844398	A3SS	0.16	50	50	ENSMUST00000155495.8	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106786501;106838743	106838537;106844398	-	106786501;106829879	106814651;106844398	MXE	0.5	100	100	ENSMUST00000124263.2	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106829879;106838743	106838537;106844398	-	106829879	106844398	cassetteExon	0.5	100	100	ENSMUST00000124263.2	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106843565	106844398	-	106829879	106844398	A3SS	0.2	50	50	ENSMUST00000124263.2	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106829879	106838537	-	106786501	106838537	A3SS	0.5	50	50	ENSMUST00000135108.2	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106829879	106844398	-	106838743	106844398	A3SS&ES	0.2	50	50	ENSMUST00000135108.2	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106838743	106843003	-	106838743	106844398	A5SS	0.33	50	50	ENSMUST00000135108.2	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106843565	106844100	-	106843565	106843664	5pMXE	0.25	50	50	ENSMUST00000142391.8	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106843565	106845088	-	106843565	106843664	5pMXE	0.25	50	50	ENSMUST00000142391.8	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106843565	106845088	-	106843565	106844100	5pMXE	0.25	50	50	ENSMUST00000127572.2	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	106838743	106844398	-	106838743	106843509	A5SS&ES	0.33	50	50	ENSMUST00000148192.2	ENSMUSG00000049606.17	Zfp644	chr5	protein_coding	zinc finger protein 644
chr5	107022794	107026669	-	107022794;107026588	107026457;107026669	ES	0.5	50	50	ENSMUST00000148495.2	ENSMUSG00000043410.17	Hfm1	chr5	protein_coding	HFM1, ATP-dependent DNA helicase homolog
chr5	106990437;106993341	106993251;106995530	-	106990437	106995530	cassetteExon	0.5	100	100	ENSMUST00000148495.2	ENSMUSG00000043410.17	Hfm1	chr5	protein_coding	HFM1, ATP-dependent DNA helicase homolog
chr5	107041410	107043062	-	107037815	107043062	A3SS	0.5	50	50	ENSMUST00000148495.2	ENSMUSG00000043410.17	Hfm1	chr5	protein_coding	HFM1, ATP-dependent DNA helicase homolog
chr5	107037815	107040564	-	107037815	107043062	A5SS	0.5	50	50	ENSMUST00000148495.2	ENSMUSG00000043410.17	Hfm1	chr5	protein_coding	HFM1, ATP-dependent DNA helicase homolog
chr5	107050012	107052092	-	107050012;107050939	107050788;107052092	ES	0.5	50	50	ENSMUST00000117588.8	ENSMUSG00000043410.17	Hfm1	chr5	protein_coding	HFM1, ATP-dependent DNA helicase homolog
chr5	107065493;107068942	107068829;107070679	-	107065493;107066355	107066243;107070679	MXE	0.5	100	100	ENSMUST00000117588.8	ENSMUSG00000043410.17	Hfm1	chr5	protein_coding	HFM1, ATP-dependent DNA helicase homolog
chr5	107059457	107065190	-	107059532	107065190	A3SS	0.5	50	50	ENSMUST00000117588.8	ENSMUSG00000043410.17	Hfm1	chr5	protein_coding	HFM1, ATP-dependent DNA helicase homolog
chr5	107070776	107072697	-	107070776	107074115	A5SS	0.33	50	50	ENSMUST00000117588.8	ENSMUSG00000043410.17	Hfm1	chr5	protein_coding	HFM1, ATP-dependent DNA helicase homolog
chr5	107070776	107073596	-	107070776	107074115	A5SS	0.33	50	50	ENSMUST00000117588.8	ENSMUSG00000043410.17	Hfm1	chr5	protein_coding	HFM1, ATP-dependent DNA helicase homolog
chr5	107072798	107074063	-	107072798	107073635	5pMXE	0.5	50	50	ENSMUST00000112690.10	ENSMUSG00000043410.17	Hfm1	chr5	protein_coding	HFM1, ATP-dependent DNA helicase homolog
chr5	107070776	107073596	-	107070776	107072697	A5SS&ES	0.5	50	50	ENSMUST00000112690.10	ENSMUSG00000043410.17	Hfm1	chr5	protein_coding	HFM1, ATP-dependent DNA helicase homolog
chr5	107066355	107070679	-	107052224	107070679	A3SS	0.33	50	50	ENSMUST00000134292.2	ENSMUSG00000043410.17	Hfm1	chr5	protein_coding	HFM1, ATP-dependent DNA helicase homolog
chr5	107068942	107070679	-	107052224	107070679	A3SS	0.33	50	50	ENSMUST00000134292.2	ENSMUSG00000043410.17	Hfm1	chr5	protein_coding	HFM1, ATP-dependent DNA helicase homolog
chr5	107050012	107052092	-	107050012	107050788	A5SS	0.5	50	50	ENSMUST00000134292.2	ENSMUSG00000043410.17	Hfm1	chr5	protein_coding	HFM1, ATP-dependent DNA helicase homolog
chr5	107052224	107052612	-	107052224	107070679	A5SS	0.5	50	50	ENSMUST00000134292.2	ENSMUSG00000043410.17	Hfm1	chr5	protein_coding	HFM1, ATP-dependent DNA helicase homolog
chr5	107121886;107122562	107122467;107123351	+	107121886	107123351	cassetteExon	0.5	100	100	ENSMUST00000117196.9	ENSMUSG00000029283.18	Cdc7	chr5	protein_coding	cell division cycle 7 (S. cerevisiae)
chr5	107121886;107122933	107122467;107123351	+	107121886	107123351	cassetteExon	0.5	100	100	ENSMUST00000117196.9	ENSMUSG00000029283.18	Cdc7	chr5	protein_coding	cell division cycle 7 (S. cerevisiae)
chr5	107124578;107124829	107124724;107127161	+	107124578	107127161	cassetteExon	0.5	100	100	ENSMUST00000117196.9	ENSMUSG00000029283.18	Cdc7	chr5	protein_coding	cell division cycle 7 (S. cerevisiae)
chr5	107124578	107127182	+	107124578	107127161	A3SS	0.33	50	50	ENSMUST00000117196.9	ENSMUSG00000029283.18	Cdc7	chr5	protein_coding	cell division cycle 7 (S. cerevisiae)
chr5	107112699	107112799	+	107112291	107112799	A5SS	0.5	50	50	ENSMUST00000117196.9	ENSMUSG00000029283.18	Cdc7	chr5	protein_coding	cell division cycle 7 (S. cerevisiae)
chr5	107122562;107122933	107122775;107123351	+	107122562	107123351	cassetteExon	0.5	100	100	ENSMUST00000031221.12	ENSMUSG00000029283.18	Cdc7	chr5	protein_coding	cell division cycle 7 (S. cerevisiae)
chr5	107124578	107124724	+	107124578	107127182	A3SS	0.33	50	50	ENSMUST00000076467.13	ENSMUSG00000029283.18	Cdc7	chr5	protein_coding	cell division cycle 7 (S. cerevisiae)
chr5	107121886	107123351	+	107121886	107122467	A3SS	0.5	50	50	ENSMUST00000140378.8	ENSMUSG00000029283.18	Cdc7	chr5	protein_coding	cell division cycle 7 (S. cerevisiae)
chr5	107325808	107340044	-	107325808	107362759	A5SS	0.5	50	50	ENSMUST00000031224.15	ENSMUSG00000029287.15	Tgfbr3	chr5	protein_coding	transforming growth factor, beta receptor III
chr5	107524228	107525770	+	107524228;107525081	107524876;107525770	ES	0.5	50	50	ENSMUST00000031215.15	ENSMUSG00000029279.16	Brdt	chr5	protein_coding	bromodomain, testis-specific
chr5	107517230	107518024	+	107517230	107518021	A3SS	0.5	50	50	ENSMUST00000031215.15	ENSMUSG00000029279.16	Brdt	chr5	protein_coding	bromodomain, testis-specific
chr5	107479228	107489166	+	107479173	107489166	A5SS	0.5	50	50	ENSMUST00000031215.15	ENSMUSG00000029279.16	Brdt	chr5	protein_coding	bromodomain, testis-specific
chr5	107551641	107553898	+	107550702	107553898	A5SS	0.25	50	50	ENSMUST00000159968.8	ENSMUSG00000033805.13	Ephx4	chr5	protein_coding	epoxide hydrolase 4
chr5	107551818	107553898	+	107550702	107553898	A5SS	0.25	50	50	ENSMUST00000159968.8	ENSMUSG00000033805.13	Ephx4	chr5	protein_coding	epoxide hydrolase 4
chr5	107553739	107553898	+	107550702	107553898	A5SS	0.25	50	50	ENSMUST00000159968.8	ENSMUSG00000033805.13	Ephx4	chr5	protein_coding	epoxide hydrolase 4
chr5	107551818	107553898	+	107551641	107553898	A5SS	0.25	50	50	ENSMUST00000049146.12	ENSMUSG00000033805.13	Ephx4	chr5	protein_coding	epoxide hydrolase 4
chr5	107553739	107553898	+	107551641	107553898	A5SS	0.25	50	50	ENSMUST00000049146.12	ENSMUSG00000033805.13	Ephx4	chr5	protein_coding	epoxide hydrolase 4
chr5	107553739	107553898	+	107551818	107553898	A5SS	0.25	50	50	ENSMUST00000161246.8	ENSMUSG00000033805.13	Ephx4	chr5	protein_coding	epoxide hydrolase 4
chr5	107618663	107632913	+	107618663	107618847	3pMXE	0.5	50	50	ENSMUST00000162298.4	ENSMUSG00000111375.5	Btbd8	chr5	protein_coding	BTB (POZ) domain containing 8
chr5	107656988	107686996	+	107656988	107658218	3pMXE	0.5	50	50	ENSMUST00000211896.2	ENSMUSG00000111375.5	Btbd8	chr5	protein_coding	BTB (POZ) domain containing 8
chr5	107651880	107652373	+	107651880	107652370	A3SS	0.5	50	50	ENSMUST00000211896.2	ENSMUSG00000111375.5	Btbd8	chr5	protein_coding	BTB (POZ) domain containing 8
chr5	107652460	107652796	+	107652460	107652857	A3SS	0.5	50	50	ENSMUST00000211896.2	ENSMUSG00000111375.5	Btbd8	chr5	protein_coding	BTB (POZ) domain containing 8
chr5	107652996	107656677	+	107652996	107654742	A3SS	0.5	50	50	ENSMUST00000211896.2	ENSMUSG00000111375.5	Btbd8	chr5	protein_coding	BTB (POZ) domain containing 8
chr5	107687089	107688820	+	107687089	107726380	A3SS	0.33	50	50	ENSMUST00000143074.2	ENSMUSG00000106631.3	Gm42669	chr5	protein_coding	predicted gene 42669
chr5	107687089	107691786	+	107687089	107726380	A3SS	0.33	50	50	ENSMUST00000143074.2	ENSMUSG00000106631.3	Gm42669	chr5	protein_coding	predicted gene 42669
chr5	107682674	107686996	+	107656988	107686996	A5SS	0.5	50	50	ENSMUST00000143074.2	ENSMUSG00000106631.3	Gm42669	chr5	protein_coding	predicted gene 42669
chr5	107687089;107689027	107688820;107691786	+	107687089	107691786	cassetteExon	0.5	100	100	ENSMUST00000160160.6	ENSMUSG00000106631.3	Gm42669	chr5	protein_coding	predicted gene 42669
chr5	107694145;107696086	107695983;107696951	+	107694145	107696951	cassetteExon	0.5	100	100	ENSMUST00000160160.6	ENSMUSG00000106631.3	Gm42669	chr5	protein_coding	predicted gene 42669
chr5	107694145	107696951	+	107694145	107695983	3pMXE	0.5	50	50	ENSMUST00000058921.15	ENSMUSG00000089798.11	1700028K03Rik	chr5	protein_coding	RIKEN cDNA 1700028K03 gene
chr5	107741744	107745410	-	107741744;107744728	107744654;107745410	ES	0.5	50	50	ENSMUST00000078021.13	ENSMUSG00000029276.14	Glmn	chr5	protein_coding	glomulin, FKBP associated protein
chr5	107744728	107745673	-	107744728	107745410	5pMXE	0.25	50	50	ENSMUST00000078021.13	ENSMUSG00000029276.14	Glmn	chr5	protein_coding	glomulin, FKBP associated protein
chr5	107723230	107726317	-	107723206	107726317	A3SS	0.5	50	50	ENSMUST00000078021.13	ENSMUSG00000029276.14	Glmn	chr5	protein_coding	glomulin, FKBP associated protein
chr5	107744728	107745158	-	107744728	107745410	A5SS	0.25	50	50	ENSMUST00000078021.13	ENSMUSG00000029276.14	Glmn	chr5	protein_coding	glomulin, FKBP associated protein
chr5	107744728	107745255	-	107744728	107745410	A5SS	0.25	50	50	ENSMUST00000078021.13	ENSMUSG00000029276.14	Glmn	chr5	protein_coding	glomulin, FKBP associated protein
chr5	107706412	107708742	-	107705211	107708742	A3SS	0.5	50	50	ENSMUST00000100949.10	ENSMUSG00000029276.14	Glmn	chr5	protein_coding	glomulin, FKBP associated protein
chr5	107705211	107705784	-	107705211	107708742	A5SS	0.5	50	50	ENSMUST00000100949.10	ENSMUSG00000029276.14	Glmn	chr5	protein_coding	glomulin, FKBP associated protein
chr5	107741744	107745410	-	107741744	107744654	A5SS&ES	0.5	50	50	ENSMUST00000082121.9	ENSMUSG00000029276.14	Glmn	chr5	protein_coding	glomulin, FKBP associated protein
chr5	107744728	107745158	-	107744728	107745673	A5SS	0.25	50	50	ENSMUST00000082121.9	ENSMUSG00000029276.14	Glmn	chr5	protein_coding	glomulin, FKBP associated protein
chr5	107744728	107745255	-	107744728	107745673	A5SS	0.25	50	50	ENSMUST00000082121.9	ENSMUSG00000029276.14	Glmn	chr5	protein_coding	glomulin, FKBP associated protein
chr5	107744728	107745158	-	107744728	107745255	A5SS	0.25	50	50	ENSMUST00000124546.8	ENSMUSG00000029276.14	Glmn	chr5	protein_coding	glomulin, FKBP associated protein
chr5	107780997	107803023	+	107780997	107789649	3pMXE	0.33	50	50	ENSMUST00000112650.8	ENSMUSG00000033773.15	Rpap2	chr5	protein_coding	RNA polymerase II associated protein 2
chr5	107780997	107789820	+	107780997	107789649	A3SS	0.33	50	50	ENSMUST00000112650.8	ENSMUSG00000033773.15	Rpap2	chr5	protein_coding	RNA polymerase II associated protein 2
chr5	107745726	107746388	+	107745460	107746388	A5SS	0.25	50	50	ENSMUST00000112650.8	ENSMUSG00000033773.15	Rpap2	chr5	protein_coding	RNA polymerase II associated protein 2
chr5	107745951	107746388	+	107745460	107746388	A5SS	0.25	50	50	ENSMUST00000112650.8	ENSMUSG00000033773.15	Rpap2	chr5	protein_coding	RNA polymerase II associated protein 2
chr5	107746169	107746388	+	107745460	107746388	A5SS	0.25	50	50	ENSMUST00000112650.8	ENSMUSG00000033773.15	Rpap2	chr5	protein_coding	RNA polymerase II associated protein 2
chr5	107749725	107751392	+	107749711	107751392	A5SS	0.5	50	50	ENSMUST00000112650.8	ENSMUSG00000033773.15	Rpap2	chr5	protein_coding	RNA polymerase II associated protein 2
chr5	107780997	107789820	+	107780997	107803023	A3SS	0.33	50	50	ENSMUST00000112651.8	ENSMUSG00000033773.15	Rpap2	chr5	protein_coding	RNA polymerase II associated protein 2
chr5	107745951	107746388	+	107745726	107746388	A5SS	0.25	50	50	ENSMUST00000112651.8	ENSMUSG00000033773.15	Rpap2	chr5	protein_coding	RNA polymerase II associated protein 2
chr5	107746169	107746388	+	107745726	107746388	A5SS	0.25	50	50	ENSMUST00000112651.8	ENSMUSG00000033773.15	Rpap2	chr5	protein_coding	RNA polymerase II associated protein 2
chr5	107745951	107746388	+	107746169	107746388	A5SS	0.25	50	50	ENSMUST00000150074.2	ENSMUSG00000033773.15	Rpap2	chr5	protein_coding	RNA polymerase II associated protein 2
chr5	107871752	107873821	-	107871752	107873427	5pMXE	0.5	50	50	ENSMUST00000159164.9	ENSMUSG00000029275.19	Gfi1	chr5	protein_coding	growth factor independent 1 transcription repressor
chr5	107963757;107964499	107964466;107964640	-	107963757	107964640	cassetteExon	0.5	100	100	ENSMUST00000112642.8	ENSMUSG00000011831.17	Evi5	chr5	protein_coding	ecotropic viral integration site 5
chr5	107969760;107985312	107985287;107989937	-	107969760	107989937	cassetteExon	0.5	100	100	ENSMUST00000112642.8	ENSMUSG00000011831.17	Evi5	chr5	protein_coding	ecotropic viral integration site 5
chr5	107990166;108020521	108020467;108022855	-	107990166	108022855	cassetteExon	0.5	100	100	ENSMUST00000112642.8	ENSMUSG00000011831.17	Evi5	chr5	protein_coding	ecotropic viral integration site 5
chr5	107990166;108020857	108020467;108022855	-	107990166	108022855	cassetteExon	0.5	100	100	ENSMUST00000112642.8	ENSMUSG00000011831.17	Evi5	chr5	protein_coding	ecotropic viral integration site 5
chr5	107958188	107960224	-	107947126	107960224	A3SS	0.5	50	50	ENSMUST00000112642.8	ENSMUSG00000011831.17	Evi5	chr5	protein_coding	ecotropic viral integration site 5
chr5	107947126	107957456	-	107947126	107960224	A5SS	0.5	50	50	ENSMUST00000112642.8	ENSMUSG00000011831.17	Evi5	chr5	protein_coding	ecotropic viral integration site 5
chr5	107990166	108016104	-	107990166	108022855	A5SS	0.25	50	50	ENSMUST00000112642.8	ENSMUSG00000011831.17	Evi5	chr5	protein_coding	ecotropic viral integration site 5
chr5	107990166	108016657	-	107990166	108022855	A5SS	0.25	50	50	ENSMUST00000112642.8	ENSMUSG00000011831.17	Evi5	chr5	protein_coding	ecotropic viral integration site 5
chr5	107990166	108020467	-	107990166	108016657	5pMXE	0.25	50	50	ENSMUST00000128723.8	ENSMUSG00000011831.17	Evi5	chr5	protein_coding	ecotropic viral integration site 5
chr5	107990166	108016104	-	107990166	108016657	A5SS	0.25	50	50	ENSMUST00000128723.8	ENSMUSG00000011831.17	Evi5	chr5	protein_coding	ecotropic viral integration site 5
chr5	107998170	108020467	-	107990166	108020467	A3SS	0.5	50	50	ENSMUST00000132482.8	ENSMUSG00000011831.17	Evi5	chr5	protein_coding	ecotropic viral integration site 5
chr5	108020857	108022855	-	108020521	108022855	A3SS	0.33	50	50	ENSMUST00000132482.8	ENSMUSG00000011831.17	Evi5	chr5	protein_coding	ecotropic viral integration site 5
chr5	107990166	108016104	-	107990166	108020467	A5SS	0.25	50	50	ENSMUST00000132482.8	ENSMUSG00000011831.17	Evi5	chr5	protein_coding	ecotropic viral integration site 5
chr5	107969760	107985287	-	107969682	107985287	A3SS	0.5	50	50	ENSMUST00000141673.2	ENSMUSG00000011831.17	Evi5	chr5	protein_coding	ecotropic viral integration site 5
chr5	107990166	108022855	-	108020857	108022855	3pMXE	0.33	50	50	ENSMUST00000132406.2	ENSMUSG00000011831.17	Evi5	chr5	protein_coding	ecotropic viral integration site 5
chr5	108048937	108049736	+	108048512	108049736	A5SS	0.5	50	50	ENSMUST00000082223.13	ENSMUSG00000058558.13	Rpl5	chr5	protein_coding	ribosomal protein L5
chr5	108062319	108134815	-	108062319;108072585	108072451;108134815	ES	0.5	50	50	ENSMUST00000031198.11	ENSMUSG00000029270.11	Dipk1a	chr5	protein_coding	divergent protein kinase domain 1A
chr5	108072585	108120694	-	108072585	108134815	A5SS	0.5	50	50	ENSMUST00000031198.11	ENSMUSG00000029270.11	Dipk1a	chr5	protein_coding	divergent protein kinase domain 1A
chr5	108213831	108228691	+	108213831;108221320	108221173;108228691	ES	0.2	50	50	ENSMUST00000131291.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108241272	108246985	+	108241272;108242114	108241991;108246985	ES	0.5	50	50	ENSMUST00000131291.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108247052	108251886	+	108247052;108248849	108248679;108251886	ES	0.5	50	50	ENSMUST00000131291.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108213831;108215438	108215326;108228691	+	108213831;108221320	108221173;108228691	MXE	0.5	100	100	ENSMUST00000131291.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108213831;108217229	108217028;108221173	+	108213831	108221173	cassetteExon	0.5	100	100	ENSMUST00000131291.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108213831;108217389	108217028;108228691	+	108213831;108221320	108221173;108228691	MXE	0.5	100	100	ENSMUST00000131291.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108247052;108247597	108247520;108248679	+	108247052	108248679	cassetteExon	0.5	100	100	ENSMUST00000131291.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108252184	108252261	+	108252184	108252292	A3SS	0.5	50	50	ENSMUST00000131291.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108226840	108228691	+	108221320	108228691	A5SS	0.2	50	50	ENSMUST00000131291.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108228893	108229003	+	108228889	108229003	A5SS	0.5	50	50	ENSMUST00000131291.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108229088	108234865	+	108229084	108234865	A5SS	0.33	50	50	ENSMUST00000131291.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108213831;108215438	108215326;108228691	+	108213831	108228691	cassetteExon	0.5	100	100	ENSMUST00000124195.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108213831;108217389	108217028;108228691	+	108213831	108228691	cassetteExon	0.5	100	100	ENSMUST00000124195.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108213831	108228788	+	108213831	108228691	A3SS	0.16	50	50	ENSMUST00000124195.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108226840	108228691	+	108213831	108228691	A5SS	0.2	50	50	ENSMUST00000124195.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108213831;108215438	108215326;108228691	+	108213831;108217389	108217028;108228691	MXE	0.5	100	100	ENSMUST00000141592.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108213831	108228788	+	108213831	108217028	A3SS&ES	0.16	50	50	ENSMUST00000141592.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108226840	108228691	+	108217389	108228691	A5SS	0.2	50	50	ENSMUST00000141592.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108213831;108215438	108215326;108228691	+	108213831;108221320	108217028;108228691	MXE	0.5	100	100	ENSMUST00000131264.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108217389	108228691	+	108221320	108228691	A5SS&ES	0.2	50	50	ENSMUST00000131264.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108213831	108221173	+	108213831	108217028	3pMXE	0.16	50	50	ENSMUST00000199194.2	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108213831	108228691	+	108213831	108217028	3pMXE	0.16	50	50	ENSMUST00000199194.2	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108213831	108234865	+	108213831	108217028	3pMXE	0.16	50	50	ENSMUST00000199194.2	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108213831	108215326	+	108213831	108217028	A3SS	0.16	50	50	ENSMUST00000199194.2	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108213831;108228707	108228691;108228788	+	108213831	108228788	cassetteExon	0.5	100	100	ENSMUST00000172045.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108213831	108215326	+	108213831	108228788	A3SS	0.16	50	50	ENSMUST00000172045.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108213831	108221173	+	108213831	108228788	A3SS	0.16	50	50	ENSMUST00000172045.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108241272	108246985	+	108241272	108241991	3pMXE	0.5	50	50	ENSMUST00000170319.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108213831;108229084	108228691;108234865	+	108213831	108234865	cassetteExon	0.5	100	100	ENSMUST00000170319.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108213831;108229088	108228691;108234865	+	108213831	108234865	cassetteExon	0.5	100	100	ENSMUST00000170319.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108213831;108229084	108228788;108234865	+	108213831	108234865	cassetteExon	0.5	100	100	ENSMUST00000170319.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108213831;108229088	108228788;108234865	+	108213831	108234865	cassetteExon	0.5	100	100	ENSMUST00000170319.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108213831	108215326	+	108213831	108234865	A3SS	0.16	50	50	ENSMUST00000170319.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108213831	108221173	+	108213831	108234865	A3SS	0.16	50	50	ENSMUST00000170319.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108247052	108247520	+	108247052	108251886	A3SS	0.33	50	50	ENSMUST00000112626.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108226840	108228691	+	108215438	108228691	A5SS	0.2	50	50	ENSMUST00000163823.6	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108213831	108228691	+	108221320	108228691	5pMXE	0.2	50	50	ENSMUST00000163195.2	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108215438	108228691	+	108221320	108228691	5pMXE	0.2	50	50	ENSMUST00000163195.2	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108247052	108251886	+	108247052	108248679	3pMXE	0.33	50	50	ENSMUST00000137996.8	ENSMUSG00000029267.18	Mtf2	chr5	protein_coding	metal response element binding transcription factor 2
chr5	108267274	108277884	-	108254848	108277884	A3SS	0.25	50	50	ENSMUST00000118036.8	ENSMUSG00000063406.12	Tmed5	chr5	protein_coding	transmembrane p24 trafficking protein 5
chr5	108273950	108277884	-	108254848	108277884	A3SS	0.25	50	50	ENSMUST00000118036.8	ENSMUSG00000063406.12	Tmed5	chr5	protein_coding	transmembrane p24 trafficking protein 5
chr5	108277418	108277884	-	108254848	108277884	A3SS	0.25	50	50	ENSMUST00000118036.8	ENSMUSG00000063406.12	Tmed5	chr5	protein_coding	transmembrane p24 trafficking protein 5
chr5	108273950	108277884	-	108267274	108277884	A3SS	0.25	50	50	ENSMUST00000061203.13	ENSMUSG00000063406.12	Tmed5	chr5	protein_coding	transmembrane p24 trafficking protein 5
chr5	108277418	108277884	-	108267274	108277884	A3SS	0.25	50	50	ENSMUST00000061203.13	ENSMUSG00000063406.12	Tmed5	chr5	protein_coding	transmembrane p24 trafficking protein 5
chr5	108277418	108277884	-	108273950	108277884	A3SS	0.5	50	50	ENSMUST00000002837.11	ENSMUSG00000063406.12	Tmed5	chr5	protein_coding	transmembrane p24 trafficking protein 5
chr5	108280864	108283288	+	108280949	108283288	A5SS	0.33	50	50	ENSMUST00000197718.5	ENSMUSG00000056531.12	Ccdc18	chr5	protein_coding	coiled-coil domain containing 18
chr5	108281205	108283288	+	108280949	108283288	A5SS	0.33	50	50	ENSMUST00000197718.5	ENSMUSG00000056531.12	Ccdc18	chr5	protein_coding	coiled-coil domain containing 18
chr5	108288831	108296777	+	108289045	108296777	A5SS	0.5	50	50	ENSMUST00000197718.5	ENSMUSG00000056531.12	Ccdc18	chr5	protein_coding	coiled-coil domain containing 18
chr5	108309624	108315875	+	108309624;108311638	108311514;108315875	ES	0.5	50	50	ENSMUST00000047677.9	ENSMUSG00000056531.12	Ccdc18	chr5	protein_coding	coiled-coil domain containing 18
chr5	108281205	108283288	+	108280864	108283288	A5SS	0.33	50	50	ENSMUST00000047677.9	ENSMUSG00000056531.12	Ccdc18	chr5	protein_coding	coiled-coil domain containing 18
chr5	108425178	108426385	+	108423598	108426385	A5SS	0.5	50	50	ENSMUST00000031190.5	ENSMUSG00000029265.5	Dr1	chr5	protein_coding	down-regulator of transcription 1
chr5	108480058	108480550	+	108480034	108480550	A5SS	0.5	50	50	ENSMUST00000031189.14	ENSMUSG00000029263.16	Pigg	chr5	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class G
chr5	108462030	108465129	+	108462030	108467762	A3SS	0.5	50	50	ENSMUST00000118910.2	ENSMUSG00000029263.16	Pigg	chr5	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class G
chr5	108466879	108467762	+	108462030	108467762	A5SS	0.5	50	50	ENSMUST00000118910.2	ENSMUSG00000029263.16	Pigg	chr5	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class G
chr5	108515773	108516111	+	108515773	108515987	A3SS	0.5	50	50	ENSMUST00000197854.2	ENSMUSG00000072769.7	Gm10419	chr5	lncRNA	predicted gene 10419
chr5	108516179	108517222	+	108516179	108517225	A3SS	0.5	50	50	ENSMUST00000197854.2	ENSMUSG00000072769.7	Gm10419	chr5	lncRNA	predicted gene 10419
chr5	108517544	108520082	+	108517544	108518653	A3SS	0.5	50	50	ENSMUST00000196693.5	ENSMUSG00000072769.7	Gm10419	chr5	lncRNA	predicted gene 10419
chr5	108518473	108518653	+	108517544	108518653	A5SS	0.5	50	50	ENSMUST00000196693.5	ENSMUSG00000072769.7	Gm10419	chr5	lncRNA	predicted gene 10419
chr5	108517544;108518901	108518653;108520082	+	108517544	108520082	cassetteExon	0.5	100	100	ENSMUST00000198585.2	ENSMUSG00000072769.7	Gm10419	chr5	lncRNA	predicted gene 10419
chr5	108517544	108520082	+	108518901	108520082	5pMXE	0.5	50	50	ENSMUST00000199724.2	ENSMUSG00000072769.7	Gm10419	chr5	lncRNA	predicted gene 10419
chr5	108581203	108581892	-	108581203;108581695	108581597;108581892	ES	0.5	50	50	ENSMUST00000049628.16	ENSMUSG00000050856.17	Atp5k	chr5	protein_coding	ATP synthase, H+ transporting, mitochondrial F1F0 complex, subunit E
chr5	108585901	108586066	+	108585901	108589151	A3SS	0.5	50	50	ENSMUST00000239160.2	ENSMUSG00000118523.2	Gm34319	chr5	transcribed_unitary_pseudogene	predicted gene, 34319
chr5	108590127	108591305	-	108590127;108590999	108590890;108591305	ES	0.5	50	50	ENSMUST00000031455.5	ENSMUSG00000029490.5	Mfsd7a	chr5	protein_coding	major facilitator superfamily domain containing 7A
chr5	108593960	108596584	-	108593148	108596584	A3SS	0.5	50	50	ENSMUST00000238510.2	ENSMUSG00000029490.5	Mfsd7a	chr5	protein_coding	major facilitator superfamily domain containing 7A
chr5	108593148	108593317	-	108593148	108596584	A5SS	0.5	50	50	ENSMUST00000238510.2	ENSMUSG00000029490.5	Mfsd7a	chr5	protein_coding	major facilitator superfamily domain containing 7A
chr5	108621772;108622509	108622445;108622976	+	108621772	108622976	cassetteExon	0.5	100	100	ENSMUST00000112597.8	ENSMUSG00000033623.14	Pcgf3	chr5	protein_coding	polycomb group ring finger 3
chr5	108673433	108696398	-	108673433	108696372	A5SS	0.5	50	50	ENSMUST00000046892.10	ENSMUSG00000033615.10	Cplx1	chr5	protein_coding	complexin 1
chr5	108724545;108725115	108724694;108728773	-	108724545	108728773	cassetteExon	0.5	100	100	ENSMUST00000156110.8	ENSMUSG00000062234.15	Gak	chr5	protein_coding	cyclin G associated kinase
chr5	108731015;108732244	108732098;108733207	-	108731015	108733207	cassetteExon	0.5	100	100	ENSMUST00000156110.8	ENSMUSG00000062234.15	Gak	chr5	protein_coding	cyclin G associated kinase
chr5	108733400	108738970	-	108733400	108739011	A5SS	0.5	50	50	ENSMUST00000156110.8	ENSMUSG00000062234.15	Gak	chr5	protein_coding	cyclin G associated kinase
chr5	108761504	108771126	-	108761504;108764917	108764775;108771126	ES	0.5	50	50	ENSMUST00000046603.15	ENSMUSG00000062234.15	Gak	chr5	protein_coding	cyclin G associated kinase
chr5	108772957	108777195	-	108772957	108777367	A5SS	0.33	50	50	ENSMUST00000046603.15	ENSMUSG00000062234.15	Gak	chr5	protein_coding	cyclin G associated kinase
chr5	108772957	108777304	-	108772957	108777367	A5SS	0.33	50	50	ENSMUST00000046603.15	ENSMUSG00000062234.15	Gak	chr5	protein_coding	cyclin G associated kinase
chr5	108761504;108764917	108764775;108772896	-	108761504;108772108	108771126;108772896	MXE	0.5	100	100	ENSMUST00000135225.8	ENSMUSG00000062234.15	Gak	chr5	protein_coding	cyclin G associated kinase
chr5	108772108	108772896	-	108764917	108772896	A3SS	0.5	50	50	ENSMUST00000199048.5	ENSMUSG00000062234.15	Gak	chr5	protein_coding	cyclin G associated kinase
chr5	108761504	108771126	-	108761504	108764775	A5SS&ES	0.5	50	50	ENSMUST00000199048.5	ENSMUSG00000062234.15	Gak	chr5	protein_coding	cyclin G associated kinase
chr5	108764917	108771126	-	108764917	108772896	A5SS	0.5	50	50	ENSMUST00000199048.5	ENSMUSG00000062234.15	Gak	chr5	protein_coding	cyclin G associated kinase
chr5	108724545	108728773	-	108724545	108724694	5pMXE	0.5	50	50	ENSMUST00000199010.2	ENSMUSG00000062234.15	Gak	chr5	protein_coding	cyclin G associated kinase
chr5	108724545	108728773	-	108725115	108728773	3pMXE	0.5	50	50	ENSMUST00000196010.2	ENSMUSG00000062234.15	Gak	chr5	protein_coding	cyclin G associated kinase
chr5	108731015	108733207	-	108732244	108733207	3pMXE	0.5	50	50	ENSMUST00000139303.2	ENSMUSG00000062234.15	Gak	chr5	protein_coding	cyclin G associated kinase
chr5	108772957	108777304	-	108772957	108777195	5pMXE	0.33	50	50	ENSMUST00000145935.6	ENSMUSG00000062234.15	Gak	chr5	protein_coding	cyclin G associated kinase
chr5	108777909	108786103	+	108777766	108786103	A5SS	0.5	50	50	ENSMUST00000146207.6	ENSMUSG00000013495.16	Tmem175	chr5	protein_coding	transmembrane protein 175
chr5	108777909	108786103	+	108777909	108786139	A3SS	0.5	50	50	ENSMUST00000078323.13	ENSMUSG00000013495.16	Tmem175	chr5	protein_coding	transmembrane protein 175
chr5	108802276	108802582	-	108802276;108802500	108802410;108802582	ES	0.5	50	50	ENSMUST00000053913.13	ENSMUSG00000004815.13	Dgkq	chr5	protein_coding	diacylglycerol kinase, theta
chr5	108806151	108817316	-	108806151	108808309	5pMXE	0.5	50	50	ENSMUST00000053913.13	ENSMUSG00000004815.13	Dgkq	chr5	protein_coding	diacylglycerol kinase, theta
chr5	108798834;108799864	108799758;108800260	-	108798834	108800260	cassetteExon	0.5	100	100	ENSMUST00000053913.13	ENSMUSG00000004815.13	Dgkq	chr5	protein_coding	diacylglycerol kinase, theta
chr5	108800419	108801047	-	108800375	108801047	A3SS	0.5	50	50	ENSMUST00000053913.13	ENSMUSG00000004815.13	Dgkq	chr5	protein_coding	diacylglycerol kinase, theta
chr5	108801087	108801502	-	108801085	108801502	A3SS	0.5	50	50	ENSMUST00000053913.13	ENSMUSG00000004815.13	Dgkq	chr5	protein_coding	diacylglycerol kinase, theta
chr5	108803951	108804290	-	108803997	108804290	A3SS	0.5	50	50	ENSMUST00000053913.13	ENSMUSG00000004815.13	Dgkq	chr5	protein_coding	diacylglycerol kinase, theta
chr5	108801085	108801638	-	108801085	108801502	A5SS	0.5	50	50	ENSMUST00000053913.13	ENSMUSG00000004815.13	Dgkq	chr5	protein_coding	diacylglycerol kinase, theta
chr5	108801652	108801940	-	108801652	108801950	A5SS	0.5	50	50	ENSMUST00000053913.13	ENSMUSG00000004815.13	Dgkq	chr5	protein_coding	diacylglycerol kinase, theta
chr5	108797791	108798683	-	108798504	108798683	A3SS&ES	0.5	50	50	ENSMUST00000144624.8	ENSMUSG00000004815.13	Dgkq	chr5	protein_coding	diacylglycerol kinase, theta
chr5	108797791;108798504	108798067;108798683	-	108797791	108798683	cassetteExon	0.5	100	100	ENSMUST00000153365.8	ENSMUSG00000004815.13	Dgkq	chr5	protein_coding	diacylglycerol kinase, theta
chr5	108802276	108802582	-	108802500	108802582	3pMXE	0.5	50	50	ENSMUST00000139598.2	ENSMUSG00000004815.13	Dgkq	chr5	protein_coding	diacylglycerol kinase, theta
chr5	108817383	108827365	+	108817383;108818125	108817985;108827365	ES	0.5	50	50	ENSMUST00000071650.13	ENSMUSG00000033540.19	Idua	chr5	protein_coding	iduronidase, alpha-L
chr5	108818125	108827570	+	108818125;108827450	108827365;108827570	ES	0.5	50	50	ENSMUST00000071650.13	ENSMUSG00000033540.19	Idua	chr5	protein_coding	iduronidase, alpha-L
chr5	108829458	108829768	+	108829458;108829659	108829538;108829768	ES	0.33	50	50	ENSMUST00000071650.13	ENSMUSG00000033540.19	Idua	chr5	protein_coding	iduronidase, alpha-L
chr5	108828072	108828261	+	108828072	108828161	A3SS	0.5	50	50	ENSMUST00000071650.13	ENSMUSG00000033540.19	Idua	chr5	protein_coding	iduronidase, alpha-L
chr5	108827628	108827977	+	108827677	108827977	A5SS	0.5	50	50	ENSMUST00000071650.13	ENSMUSG00000033540.19	Idua	chr5	protein_coding	iduronidase, alpha-L
chr5	108829070	108829246	+	108828943	108829246	A5SS	0.5	50	50	ENSMUST00000071650.13	ENSMUSG00000033540.19	Idua	chr5	protein_coding	iduronidase, alpha-L
chr5	108828943	108829768	+	108829458	108829768	A5SS&ES	0.33	50	50	ENSMUST00000140620.8	ENSMUSG00000033540.19	Idua	chr5	protein_coding	iduronidase, alpha-L
chr5	108829458	108829768	+	108829458	108829538	3pMXE	0.5	50	50	ENSMUST00000151445.8	ENSMUSG00000033540.19	Idua	chr5	protein_coding	iduronidase, alpha-L
chr5	108817383;108818125	108817985;108827570	+	108817383;108827450	108827365;108827570	MXE	0.5	100	100	ENSMUST00000119212.8	ENSMUSG00000033540.19	Idua	chr5	protein_coding	iduronidase, alpha-L
chr5	108828943;108829458	108829246;108829768	+	108828943	108829768	cassetteExon	0.5	100	100	ENSMUST00000139734.2	ENSMUSG00000033540.19	Idua	chr5	protein_coding	iduronidase, alpha-L
chr5	108828943;108829659	108829246;108829768	+	108828943	108829768	cassetteExon	0.5	100	100	ENSMUST00000139734.2	ENSMUSG00000033540.19	Idua	chr5	protein_coding	iduronidase, alpha-L
chr5	108821914	108822414	-	108821914	108823105	A5SS	0.33	50	50	ENSMUST00000051757.14	ENSMUSG00000046959.17	Slc26a1	chr5	protein_coding	solute carrier family 26 (sulfate transporter), member 1
chr5	108821914	108822528	-	108821914	108823105	A5SS	0.33	50	50	ENSMUST00000051757.14	ENSMUSG00000046959.17	Slc26a1	chr5	protein_coding	solute carrier family 26 (sulfate transporter), member 1
chr5	108821914	108822528	-	108821914	108822414	A5SS	0.33	50	50	ENSMUST00000119270.2	ENSMUSG00000046959.17	Slc26a1	chr5	protein_coding	solute carrier family 26 (sulfate transporter), member 1
chr5	108842984	108852533	+	108842984	108851152	3pMXE	0.5	50	50	ENSMUST00000196222.5	ENSMUSG00000008090.15	Fgfrl1	chr5	protein_coding	fibroblast growth factor receptor-like 1
chr5	108842398	108842904	+	108840321	108842904	A5SS	0.5	50	50	ENSMUST00000196222.5	ENSMUSG00000008090.15	Fgfrl1	chr5	protein_coding	fibroblast growth factor receptor-like 1
chr5	108842398	108842761	+	108842398	108842904	A3SS	0.5	50	50	ENSMUST00000197255.2	ENSMUSG00000008090.15	Fgfrl1	chr5	protein_coding	fibroblast growth factor receptor-like 1
chr5	108842984;108851424	108851152;108852533	+	108842984	108852533	cassetteExon	0.5	100	100	ENSMUST00000112560.8	ENSMUSG00000008090.15	Fgfrl1	chr5	protein_coding	fibroblast growth factor receptor-like 1
chr5	108877343	108879531	-	108877343;108877843	108877680;108879531	ES	0.5	50	50	ENSMUST00000212176.2	ENSMUSG00000055385.13	Rnf212	chr5	protein_coding	ring finger protein 212
chr5	108907951	108918417	-	108907951;108917739	108917603;108918417	ES	0.5	50	50	ENSMUST00000212176.2	ENSMUSG00000055385.13	Rnf212	chr5	protein_coding	ring finger protein 212
chr5	108908012	108922740	-	108918478	108922740	A3SS&ES	0.5	50	50	ENSMUST00000212176.2	ENSMUSG00000055385.13	Rnf212	chr5	protein_coding	ring finger protein 212
chr5	108897315	108898424	-	108897315	108903690	A5SS	0.5	50	50	ENSMUST00000212176.2	ENSMUSG00000055385.13	Rnf212	chr5	protein_coding	ring finger protein 212
chr5	108877343	108879531	-	108877843	108879531	3pMXE	0.5	50	50	ENSMUST00000200159.2	ENSMUSG00000055385.13	Rnf212	chr5	protein_coding	ring finger protein 212
chr5	108951240	108956418	-	108951240;108955302	108955119;108956418	ES	0.5	50	50	ENSMUST00000233865.2	ENSMUSG00000090961.3	Vmn2r8	chr5	protein_coding	vomeronasal 2, receptor 8
chr5	108946787	108947112	-	108945966	108947112	A3SS	0.5	50	50	ENSMUST00000233865.2	ENSMUSG00000090961.3	Vmn2r8	chr5	protein_coding	vomeronasal 2, receptor 8
chr5	108950299	108950961	-	108950362	108950961	A3SS	0.5	50	50	ENSMUST00000233865.2	ENSMUSG00000090961.3	Vmn2r8	chr5	protein_coding	vomeronasal 2, receptor 8
chr5	108996100	108996785	-	108996163	108996785	A3SS	0.5	50	50	ENSMUST00000233198.2	ENSMUSG00000091624.3	Vmn2r9	chr5	protein_coding	vomeronasal 2, receptor 9
chr5	109150559;109151412	109151130;109154103	-	109150559	109154103	cassetteExon	0.5	100	100	ENSMUST00000176594.3	ENSMUSG00000067010.5	Vmn2r10	chr5	protein_coding	vomeronasal 2, receptor 10
chr5	109144312	109145470	-	109143786	109145470	A3SS	0.5	50	50	ENSMUST00000176594.3	ENSMUSG00000067010.5	Vmn2r10	chr5	protein_coding	vomeronasal 2, receptor 10
chr5	109195646	109195957	-	109195646	109196793	A5SS	0.5	50	50	ENSMUST00000164875.3	ENSMUSG00000091450.3	Vmn2r11	chr5	protein_coding	vomeronasal 2, receptor 11
chr5	109442231;109442850	109442621;109445223	-	109442231	109445223	cassetteExon	0.5	100	100	ENSMUST00000167133.3	ENSMUSG00000091375.3	Vmn2r15	chr5	protein_coding	vomeronasal 2, receptor 15
chr5	109435039	109436192	-	109435042	109436192	A3SS	0.5	50	50	ENSMUST00000167133.3	ENSMUSG00000091375.3	Vmn2r15	chr5	protein_coding	vomeronasal 2, receptor 15
chr5	109435042	109436068	-	109435042	109436192	A5SS	0.5	50	50	ENSMUST00000167133.3	ENSMUSG00000091375.3	Vmn2r15	chr5	protein_coding	vomeronasal 2, receptor 15
chr5	109441349	109441949	-	109441349	109441925	A5SS	0.5	50	50	ENSMUST00000167133.3	ENSMUSG00000091375.3	Vmn2r15	chr5	protein_coding	vomeronasal 2, receptor 15
chr5	109478452;109485725	109485585;109486987	+	109478452	109486987	cassetteExon	0.5	100	100	ENSMUST00000165180.3	ENSMUSG00000092080.3	Vmn2r16	chr5	protein_coding	vomeronasal 2, receptor 16
chr5	109582254	109600349	+	109582254	109600346	A3SS	0.33	50	50	ENSMUST00000232833.2	ENSMUSG00000091879.3	Vmn2r17	chr5	protein_coding	vomeronasal 2, receptor 17
chr5	109582254	109601316	+	109582254	109600346	A3SS	0.33	50	50	ENSMUST00000232833.2	ENSMUSG00000091879.3	Vmn2r17	chr5	protein_coding	vomeronasal 2, receptor 17
chr5	109582254	109600349	+	109582254	109601316	A3SS	0.33	50	50	ENSMUST00000232722.2	ENSMUSG00000091879.3	Vmn2r17	chr5	protein_coding	vomeronasal 2, receptor 17
chr5	109703526	109703885	-	109703493	109703885	A3SS	0.5	50	50	ENSMUST00000200284.5	ENSMUSG00000033467.13	Crlf2	chr5	protein_coding	cytokine receptor-like factor 2
chr5	109705480	109706671	-	109705615	109706671	A3SS	0.5	50	50	ENSMUST00000200284.5	ENSMUSG00000033467.13	Crlf2	chr5	protein_coding	cytokine receptor-like factor 2
chr5	110081881	110088292	+	110071632	110088292	A5SS	0.5	50	50	ENSMUST00000112544.8	ENSMUSG00000090015.9	Gm15446	chr5	protein_coding	predicted gene 15446
chr5	110144499;110151318	110151219;110154810	+	110144499	110154810	cassetteExon	0.5	100	100	ENSMUST00000112540.8	ENSMUSG00000066613.15	Zfp932	chr5	protein_coding	zinc finger protein 932
chr5	110144496	110154810	+	110144499	110154810	A5SS	0.25	50	50	ENSMUST00000112540.8	ENSMUSG00000066613.15	Zfp932	chr5	protein_coding	zinc finger protein 932
chr5	110154487	110154810	+	110144499	110154810	A5SS	0.25	50	50	ENSMUST00000112540.8	ENSMUSG00000066613.15	Zfp932	chr5	protein_coding	zinc finger protein 932
chr5	110144496	110154810	+	110151318	110154810	A5SS&ES	0.25	50	50	ENSMUST00000125213.8	ENSMUSG00000066613.15	Zfp932	chr5	protein_coding	zinc finger protein 932
chr5	110154487	110154810	+	110151318	110154810	A5SS	0.25	50	50	ENSMUST00000125213.8	ENSMUSG00000066613.15	Zfp932	chr5	protein_coding	zinc finger protein 932
chr5	110154487	110154810	+	110144496	110154810	A5SS	0.25	50	50	ENSMUST00000143639.8	ENSMUSG00000066613.15	Zfp932	chr5	protein_coding	zinc finger protein 932
chr5	110144499	110154810	+	110144499	110151219	3pMXE	0.5	50	50	ENSMUST00000142180.2	ENSMUSG00000066613.15	Zfp932	chr5	protein_coding	zinc finger protein 932
chr5	110240865	110242197	-	110228730	110242197	A3SS	0.5	50	50	ENSMUST00000210052.2	ENSMUSG00000109771.2	Gm35315	chr5	protein_coding	predicted gene, 35315
chr5	110228730	110235387	-	110228730	110242197	A5SS	0.5	50	50	ENSMUST00000210052.2	ENSMUSG00000109771.2	Gm35315	chr5	protein_coding	predicted gene, 35315
chr5	110248366	110248882	+	110248191	110248882	A5SS	0.33	50	50	ENSMUST00000086687.10	ENSMUSG00000064247.15	Plcxd1	chr5	protein_coding	phosphatidylinositol-specific phospholipase C, X domain containing 1
chr5	110248486	110248882	+	110248191	110248882	A5SS	0.33	50	50	ENSMUST00000086687.10	ENSMUSG00000064247.15	Plcxd1	chr5	protein_coding	phosphatidylinositol-specific phospholipase C, X domain containing 1
chr5	110249286	110249666	+	110249390	110249666	A5SS	0.5	50	50	ENSMUST00000086687.10	ENSMUSG00000064247.15	Plcxd1	chr5	protein_coding	phosphatidylinositol-specific phospholipase C, X domain containing 1
chr5	110249796	110250042	+	110249794	110250042	A5SS	0.5	50	50	ENSMUST00000086687.10	ENSMUSG00000064247.15	Plcxd1	chr5	protein_coding	phosphatidylinositol-specific phospholipase C, X domain containing 1
chr5	110250129	110250312	+	110250197	110250312	A5SS	0.5	50	50	ENSMUST00000086687.10	ENSMUSG00000064247.15	Plcxd1	chr5	protein_coding	phosphatidylinositol-specific phospholipase C, X domain containing 1
chr5	110248486	110248882	+	110248366	110248882	A5SS	0.33	50	50	ENSMUST00000141066.8	ENSMUSG00000064247.15	Plcxd1	chr5	protein_coding	phosphatidylinositol-specific phospholipase C, X domain containing 1
chr5	110254563	110254926	-	110254806	110254926	A3SS&ES	0.33	50	50	ENSMUST00000077220.14	ENSMUSG00000033434.16	Gtpbp6	chr5	protein_coding	GTP binding protein 6 (putative)
chr5	110254608	110254736	-	110254649	110254736	A3SS	0.5	50	50	ENSMUST00000077220.14	ENSMUSG00000033434.16	Gtpbp6	chr5	protein_coding	GTP binding protein 6 (putative)
chr5	110254608	110254926	-	110254806	110254926	A3SS&ES	0.33	50	50	ENSMUST00000077220.14	ENSMUSG00000033434.16	Gtpbp6	chr5	protein_coding	GTP binding protein 6 (putative)
chr5	110255063	110255211	-	110255063	110255722	A5SS	0.33	50	50	ENSMUST00000077220.14	ENSMUSG00000033434.16	Gtpbp6	chr5	protein_coding	GTP binding protein 6 (putative)
chr5	110255063	110255378	-	110255063	110255722	A5SS	0.33	50	50	ENSMUST00000077220.14	ENSMUSG00000033434.16	Gtpbp6	chr5	protein_coding	GTP binding protein 6 (putative)
chr5	110254608	110254926	-	110254563	110254926	A3SS	0.33	50	50	ENSMUST00000199496.2	ENSMUSG00000033434.16	Gtpbp6	chr5	protein_coding	GTP binding protein 6 (putative)
chr5	110254608	110254926	-	110254608;110254806	110254736;110254926	ES	0.33	50	50	ENSMUST00000140538.8	ENSMUSG00000033434.16	Gtpbp6	chr5	protein_coding	GTP binding protein 6 (putative)
chr5	110255063	110255211	-	110255063	110255378	A5SS	0.33	50	50	ENSMUST00000140538.8	ENSMUSG00000033434.16	Gtpbp6	chr5	protein_coding	GTP binding protein 6 (putative)
chr5	110259932;110266416	110266285;110271626	+	110259932	110271626	cassetteExon	0.5	100	100	ENSMUST00000112528.8	ENSMUSG00000023284.16	Zfp605	chr5	protein_coding	zinc finger protein 605
chr5	110258408	110259763	+	110258183	110259763	A5SS	0.5	50	50	ENSMUST00000112528.8	ENSMUSG00000023284.16	Zfp605	chr5	protein_coding	zinc finger protein 605
chr5	110284060	110288220	+	110284060;110288055	110287983;110288220	ES	0.33	50	50	ENSMUST00000199672.5	ENSMUSG00000014668.16	Chfr	chr5	protein_coding	checkpoint with forkhead and ring finger domains
chr5	110292516	110294336	+	110292516;110292853	110292638;110294336	ES	0.5	50	50	ENSMUST00000199672.5	ENSMUSG00000014668.16	Chfr	chr5	protein_coding	checkpoint with forkhead and ring finger domains
chr5	110310647	110311872	+	110310647	110311595	3pMXE	0.5	50	50	ENSMUST00000199672.5	ENSMUSG00000014668.16	Chfr	chr5	protein_coding	checkpoint with forkhead and ring finger domains
chr5	110284060;110284518	110284349;110288220	+	110284060;110288055	110287983;110288220	MXE	0.5	100	100	ENSMUST00000199672.5	ENSMUSG00000014668.16	Chfr	chr5	protein_coding	checkpoint with forkhead and ring finger domains
chr5	110299552;110300356	110300202;110300984	+	110299552	110300984	cassetteExon	0.5	100	100	ENSMUST00000199672.5	ENSMUSG00000014668.16	Chfr	chr5	protein_coding	checkpoint with forkhead and ring finger domains
chr5	110284060	110288242	+	110284060	110287983	A3SS&ES	0.25	50	50	ENSMUST00000199672.5	ENSMUSG00000014668.16	Chfr	chr5	protein_coding	checkpoint with forkhead and ring finger domains
chr5	110302848	110306665	+	110302848	110306668	A3SS	0.5	50	50	ENSMUST00000199672.5	ENSMUSG00000014668.16	Chfr	chr5	protein_coding	checkpoint with forkhead and ring finger domains
chr5	110284060;110284518	110284349;110288220	+	110284060	110288220	cassetteExon	0.5	100	100	ENSMUST00000112519.9	ENSMUSG00000014668.16	Chfr	chr5	protein_coding	checkpoint with forkhead and ring finger domains
chr5	110284060	110288242	+	110284060	110288220	A3SS	0.25	50	50	ENSMUST00000112519.9	ENSMUSG00000014668.16	Chfr	chr5	protein_coding	checkpoint with forkhead and ring finger domains
chr5	110284060	110288242	+	110284060	110284349	A3SS&ES	0.25	50	50	ENSMUST00000199557.5	ENSMUSG00000014668.16	Chfr	chr5	protein_coding	checkpoint with forkhead and ring finger domains
chr5	110303099	110324183	-	110303099	110310258	5pMXE	0.5	50	50	ENSMUST00000152014.2	ENSMUSG00000086247.8	Gm15787	chr5	lncRNA	predicted gene 15787
chr5	110303099;110310475	110310258;110324183	-	110303099	110324183	cassetteExon	0.5	100	100	ENSMUST00000135366.8	ENSMUSG00000086247.8	Gm15787	chr5	lncRNA	predicted gene 15787
chr5	110318213	110324183	-	110303099	110324183	A3SS	0.25	50	50	ENSMUST00000135366.8	ENSMUSG00000086247.8	Gm15787	chr5	lncRNA	predicted gene 15787
chr5	110321290	110324183	-	110303099	110324183	A3SS	0.25	50	50	ENSMUST00000135366.8	ENSMUSG00000086247.8	Gm15787	chr5	lncRNA	predicted gene 15787
chr5	110303099	110324183	-	110310475	110324183	3pMXE	0.25	50	50	ENSMUST00000130630.2	ENSMUSG00000086247.8	Gm15787	chr5	lncRNA	predicted gene 15787
chr5	110318213	110324183	-	110310475	110324183	A3SS	0.25	50	50	ENSMUST00000130630.2	ENSMUSG00000086247.8	Gm15787	chr5	lncRNA	predicted gene 15787
chr5	110321290	110324183	-	110310475	110324183	A3SS	0.25	50	50	ENSMUST00000130630.2	ENSMUSG00000086247.8	Gm15787	chr5	lncRNA	predicted gene 15787
chr5	110316350;110317876	110317679;110318129	-	110316350	110318129	cassetteExon	0.5	100	100	ENSMUST00000130892.8	ENSMUSG00000086247.8	Gm15787	chr5	lncRNA	predicted gene 15787
chr5	110316350;110321290	110321146;110324183	-	110316350;110318213	110318129;110324183	MXE	0.5	100	100	ENSMUST00000130892.8	ENSMUSG00000086247.8	Gm15787	chr5	lncRNA	predicted gene 15787
chr5	110316350	110317679	-	110316350	110321146	A5SS	0.33	50	50	ENSMUST00000141008.2	ENSMUSG00000086247.8	Gm15787	chr5	lncRNA	predicted gene 15787
chr5	110316350	110318129	-	110316350	110317679	5pMXE	0.33	50	50	ENSMUST00000156579.2	ENSMUSG00000086247.8	Gm15787	chr5	lncRNA	predicted gene 15787
chr5	110316350	110318129	-	110317876	110318129	3pMXE	0.5	50	50	ENSMUST00000132210.2	ENSMUSG00000086247.8	Gm15787	chr5	lncRNA	predicted gene 15787
chr5	110321290	110324183	-	110318213	110324183	A3SS	0.5	50	50	ENSMUST00000132210.2	ENSMUSG00000086247.8	Gm15787	chr5	lncRNA	predicted gene 15787
chr5	110324915	110329469	+	110324788	110329469	A5SS	0.5	50	50	ENSMUST00000112512.8	ENSMUSG00000029502.15	Golga3	chr5	protein_coding	golgi autoantigen, golgin subfamily a, 3
chr5	110332473	110333652	+	110332353	110333652	A5SS	0.5	50	50	ENSMUST00000112512.8	ENSMUSG00000029502.15	Golga3	chr5	protein_coding	golgi autoantigen, golgin subfamily a, 3
chr5	110384345	110385524	+	110384345	110385521	A3SS	0.5	50	50	ENSMUST00000197188.5	ENSMUSG00000029501.15	Ankle2	chr5	protein_coding	ankyrin repeat and LEM domain containing 2
chr5	110398673	110399442	+	110398673	110399363	A3SS	0.5	50	50	ENSMUST00000197188.5	ENSMUSG00000029501.15	Ankle2	chr5	protein_coding	ankyrin repeat and LEM domain containing 2
chr5	110413508	110413606	-	110413511	110413606	A3SS	0.5	50	50	ENSMUST00000112505.9	ENSMUSG00000029500.17	Pgam5	chr5	protein_coding	phosphoglycerate mutase family member 5
chr5	110410140	110421845	+	110410140	110424497	A3SS	0.5	50	50	ENSMUST00000140087.2	ENSMUSG00000087439.2	Gm15788	chr5	lncRNA	predicted gene 15788
chr5	110422446	110424497	+	110410140	110424497	A5SS	0.5	50	50	ENSMUST00000140087.2	ENSMUSG00000087439.2	Gm15788	chr5	lncRNA	predicted gene 15788
chr5	110425640	110431512	-	110425640;110429225	110429063;110431512	ES	0.5	50	50	ENSMUST00000031472.12	ENSMUSG00000029499.12	Pxmp2	chr5	protein_coding	peroxisomal membrane protein 2
chr5	110428702	110429063	-	110425640	110429063	A3SS	0.5	50	50	ENSMUST00000031472.12	ENSMUSG00000029499.12	Pxmp2	chr5	protein_coding	peroxisomal membrane protein 2
chr5	110478700	110478795	+	110477537	110478795	A5SS	0.5	50	50	ENSMUST00000007296.12	ENSMUSG00000007080.15	Pole	chr5	protein_coding	polymerase (DNA directed), epsilon
chr5	110490501	110490953	-	110490501	110490646	5pMXE	0.5	50	50	ENSMUST00000112478.8	ENSMUSG00000029503.17	P2rx2	chr5	protein_coding	purinergic receptor P2X, ligand-gated ion channel, 2
chr5	110488100	110488371	-	110488163	110488371	A3SS	0.5	50	50	ENSMUST00000112478.8	ENSMUSG00000029503.17	P2rx2	chr5	protein_coding	purinergic receptor P2X, ligand-gated ion channel, 2
chr5	110490537	110490646	-	110490501	110490646	A3SS	0.5	50	50	ENSMUST00000112478.8	ENSMUSG00000029503.17	P2rx2	chr5	protein_coding	purinergic receptor P2X, ligand-gated ion channel, 2
chr5	110501036	110501885	+	110501036	110502034	A3SS	0.5	50	50	ENSMUST00000185691.7	ENSMUSG00000072754.10	Lrcol1	chr5	protein_coding	leucine rich colipase-like 1
chr5	110502159	110502379	+	110502159	110502357	A3SS	0.5	50	50	ENSMUST00000185691.7	ENSMUSG00000072754.10	Lrcol1	chr5	protein_coding	leucine rich colipase-like 1
chr5	110522385	110524119	-	110522385;110523944	110523873;110524119	ES	0.5	50	50	ENSMUST00000069483.12	ENSMUSG00000043323.18	Fbrsl1	chr5	protein_coding	fibrosin-like 1
chr5	110526121	110526760	-	110526121;110526363	110526295;110526760	ES	0.5	50	50	ENSMUST00000069483.12	ENSMUSG00000043323.18	Fbrsl1	chr5	protein_coding	fibrosin-like 1
chr5	110580011	110580767	-	110565813	110580767	A3SS	0.5	50	50	ENSMUST00000069483.12	ENSMUSG00000043323.18	Fbrsl1	chr5	protein_coding	fibrosin-like 1
chr5	110527459	110534767	-	110527459	110529467	A5SS&ES	0.5	50	50	ENSMUST00000069483.12	ENSMUSG00000043323.18	Fbrsl1	chr5	protein_coding	fibrosin-like 1
chr5	110529512	110534767	-	110529512	110543911	A5SS	0.5	50	50	ENSMUST00000069483.12	ENSMUSG00000043323.18	Fbrsl1	chr5	protein_coding	fibrosin-like 1
chr5	110527459;110529512	110529467;110534767	-	110527459	110534767	cassetteExon	0.5	100	100	ENSMUST00000056124.11	ENSMUSG00000043323.18	Fbrsl1	chr5	protein_coding	fibrosin-like 1
chr5	110526121	110526760	-	110526363	110526760	A3SS	0.5	50	50	ENSMUST00000196801.5	ENSMUSG00000043323.18	Fbrsl1	chr5	protein_coding	fibrosin-like 1
chr5	110670044	110672910	+	110662939	110672910	A5SS	0.5	50	50	ENSMUST00000141532.8	ENSMUSG00000048215.15	A630023P12Rik	chr5	lncRNA	RIKEN cDNA A630023P12 gene
chr5	110669151	110669358	+	110669151	110669795	A3SS	0.5	50	50	ENSMUST00000142879.2	ENSMUSG00000048215.15	A630023P12Rik	chr5	lncRNA	RIKEN cDNA A630023P12 gene
chr5	110751467	110761944	+	110750564	110761944	A5SS	0.5	50	50	ENSMUST00000040001.14	ENSMUSG00000033316.15	Galnt9	chr5	protein_coding	polypeptide N-acetylgalactosaminyltransferase 9
chr5	110765836	110767031	+	110765799	110767031	A5SS	0.5	50	50	ENSMUST00000040001.14	ENSMUSG00000033316.15	Galnt9	chr5	protein_coding	polypeptide N-acetylgalactosaminyltransferase 9
chr5	110804783	110805117	+	110804783;110805017	110804954;110805117	ES	0.5	50	50	ENSMUST00000031478.6	ENSMUSG00000029504.6	Ddx51	chr5	protein_coding	DEAD box helicase 51
chr5	110804783	110805117	+	110804783	110804954	3pMXE	0.5	50	50	ENSMUST00000143087.2	ENSMUSG00000029504.6	Ddx51	chr5	protein_coding	DEAD box helicase 51
chr5	110887547	110889836	-	110887547;110888155	110888048;110889836	ES	0.5	50	50	ENSMUST00000041558.15	ENSMUSG00000029505.18	Ep400	chr5	protein_coding	E1A binding protein p400
chr5	110904632	110918525	-	110904632	110918358	5pMXE	0.33	50	50	ENSMUST00000041558.15	ENSMUSG00000029505.18	Ep400	chr5	protein_coding	E1A binding protein p400
chr5	110846782;110848630	110848388;110849487	-	110846782	110849487	cassetteExon	0.5	100	100	ENSMUST00000041558.15	ENSMUSG00000029505.18	Ep400	chr5	protein_coding	E1A binding protein p400
chr5	110889926;110901780	110901670;110903263	-	110889926	110903263	cassetteExon	0.5	100	100	ENSMUST00000041558.15	ENSMUSG00000029505.18	Ep400	chr5	protein_coding	E1A binding protein p400
chr5	110816590	110818741	-	110816611	110818741	A3SS	0.5	50	50	ENSMUST00000041558.15	ENSMUSG00000029505.18	Ep400	chr5	protein_coding	E1A binding protein p400
chr5	110904632	110917915	-	110904632	110918358	A5SS	0.33	50	50	ENSMUST00000041558.15	ENSMUSG00000029505.18	Ep400	chr5	protein_coding	E1A binding protein p400
chr5	110904632	110918525	-	110904632	110917915	5pMXE	0.33	50	50	ENSMUST00000112433.2	ENSMUSG00000029505.18	Ep400	chr5	protein_coding	E1A binding protein p400
chr5	110923504;110925617	110925480;110927553	-	110923504	110927553	cassetteExon	0.5	100	100	ENSMUST00000112426.8	ENSMUSG00000029507.17	Pus1	chr5	protein_coding	pseudouridine synthase 1
chr5	110923504	110924420	-	110923504	110927553	A5SS	0.33	50	50	ENSMUST00000112426.8	ENSMUSG00000029507.17	Pus1	chr5	protein_coding	pseudouridine synthase 1
chr5	110923504;110924473	110924420;110925480	-	110923504	110925480	cassetteExon	0.5	100	100	ENSMUST00000031483.15	ENSMUSG00000029507.17	Pus1	chr5	protein_coding	pseudouridine synthase 1
chr5	110927763	110928420	-	110927763	110928106	A5SS	0.33	50	50	ENSMUST00000031483.15	ENSMUSG00000029507.17	Pus1	chr5	protein_coding	pseudouridine synthase 1
chr5	110927763	110928428	-	110927763	110928106	A5SS	0.33	50	50	ENSMUST00000031483.15	ENSMUSG00000029507.17	Pus1	chr5	protein_coding	pseudouridine synthase 1
chr5	110927763	110928428	-	110927763	110928420	A5SS	0.33	50	50	ENSMUST00000031481.13	ENSMUSG00000029507.17	Pus1	chr5	protein_coding	pseudouridine synthase 1
chr5	110940979;110941357	110941241;110941681	-	110940979	110941681	cassetteExon	0.5	100	100	ENSMUST00000031490.11	ENSMUSG00000029512.12	Ulk1	chr5	protein_coding	unc-51 like kinase 1
chr5	110935527	110935639	-	110935558	110935639	A3SS	0.5	50	50	ENSMUST00000031490.11	ENSMUSG00000029512.12	Ulk1	chr5	protein_coding	unc-51 like kinase 1
chr5	110938820	110938918	-	110938802	110938918	A3SS	0.5	50	50	ENSMUST00000031490.11	ENSMUSG00000029512.12	Ulk1	chr5	protein_coding	unc-51 like kinase 1
chr5	110935558	110936613	-	110935558	110935639	A5SS&ES	0.5	50	50	ENSMUST00000031490.11	ENSMUSG00000029512.12	Ulk1	chr5	protein_coding	unc-51 like kinase 1
chr5	110978849	110983841	-	110978849	110982521	A5SS&ES	0.5	50	50	ENSMUST00000056937.12	ENSMUSG00000043510.13	Hscb	chr5	protein_coding	HscB iron-sulfur cluster co-chaperone
chr5	110982665	110983841	-	110982665	110983846	A5SS	0.5	50	50	ENSMUST00000056937.12	ENSMUSG00000043510.13	Hscb	chr5	protein_coding	HscB iron-sulfur cluster co-chaperone
chr5	110978849	110983841	-	110978849;110982665	110982521;110983841	ES	0.5	50	50	ENSMUST00000144850.8	ENSMUSG00000043510.13	Hscb	chr5	protein_coding	HscB iron-sulfur cluster co-chaperone
chr5	110987914	110989072	+	110987914;110988406	110988277;110989072	ES	0.5	50	50	ENSMUST00000200172.2	ENSMUSG00000029521.8	Chek2	chr5	protein_coding	checkpoint kinase 2
chr5	110996643;110997552	110997462;111003591	+	110996643	111003591	cassetteExon	0.5	100	100	ENSMUST00000199937.5	ENSMUSG00000029521.8	Chek2	chr5	protein_coding	checkpoint kinase 2
chr5	110996643;110997552	110997489;111003591	+	110996643	111003591	cassetteExon	0.5	100	100	ENSMUST00000199937.5	ENSMUSG00000029521.8	Chek2	chr5	protein_coding	checkpoint kinase 2
chr5	111014292	111014402	+	111014292	111014804	A3SS	0.5	50	50	ENSMUST00000199937.5	ENSMUSG00000029521.8	Chek2	chr5	protein_coding	checkpoint kinase 2
chr5	110996643	110997489	+	110996643	110997462	A3SS	0.33	50	50	ENSMUST00000066160.3	ENSMUSG00000029521.8	Chek2	chr5	protein_coding	checkpoint kinase 2
chr5	110987914	110989072	+	110988406	110989072	5pMXE	0.5	50	50	ENSMUST00000198373.2	ENSMUSG00000029521.8	Chek2	chr5	protein_coding	checkpoint kinase 2
chr5	110996643	111003591	+	110996643	110997489	3pMXE	0.33	50	50	ENSMUST00000200630.2	ENSMUSG00000029521.8	Chek2	chr5	protein_coding	checkpoint kinase 2
chr5	111249966	111330790	+	111249966;111325578	111325486;111330790	ES	0.5	50	50	ENSMUST00000040111.10	ENSMUSG00000033209.18	Ttc28	chr5	protein_coding	tetratricopeptide repeat domain 28
chr5	111040976	111061072	+	111040976	111232888	A3SS	0.5	50	50	ENSMUST00000040111.10	ENSMUSG00000033209.18	Ttc28	chr5	protein_coding	tetratricopeptide repeat domain 28
chr5	111383507	111386169	+	111383507	111414401	A3SS	0.5	50	50	ENSMUST00000040111.10	ENSMUSG00000033209.18	Ttc28	chr5	protein_coding	tetratricopeptide repeat domain 28
chr5	111495721	111519178	+	111495721;111497440	111497357;111519178	ES	0.5	50	50	ENSMUST00000086635.9	ENSMUSG00000050017.12	Pitpnb	chr5	protein_coding	phosphatidylinositol transfer protein, beta
chr5	111530976	111534369	+	111530976;111533470	111533386;111534369	ES	0.5	50	50	ENSMUST00000086635.9	ENSMUSG00000050017.12	Pitpnb	chr5	protein_coding	phosphatidylinositol transfer protein, beta
chr5	111730376	111751954	+	111730376	111733700	3pMXE	0.5	50	50	ENSMUST00000064930.8	ENSMUSG00000052848.8	C130026L21Rik	chr5	lncRNA	RIKEN cDNA C130026L21 gene
chr5	111729736;111730162	111730045;111730287	+	111729736	111730287	cassetteExon	0.5	100	100	ENSMUST00000064930.8	ENSMUSG00000052848.8	C130026L21Rik	chr5	lncRNA	RIKEN cDNA C130026L21 gene
chr5	111882495	111886993	-	111882675	111886993	A3SS	0.5	50	50	ENSMUST00000137398.8	ENSMUSG00000085271.8	E130006D01Rik	chr5	lncRNA	RIKEN cDNA E130006D01 gene
chr5	111882495	111887702	-	111887079	111887702	A3SS&ES	0.5	50	50	ENSMUST00000137398.8	ENSMUSG00000085271.8	E130006D01Rik	chr5	lncRNA	RIKEN cDNA E130006D01 gene
chr5	111882495	111887702	-	111882495;111887079	111886993;111887702	ES	0.5	50	50	ENSMUST00000129065.8	ENSMUSG00000085271.8	E130006D01Rik	chr5	lncRNA	RIKEN cDNA E130006D01 gene
chr5	111948880	111953248	+	111948880	111953245	A3SS	0.5	50	50	ENSMUST00000198395.5	ENSMUSG00000105376.5	Gm36535	chr5	lncRNA	predicted gene, 36535
chr5	111941356	111948737	+	111939476	111948737	A5SS	0.5	50	50	ENSMUST00000198395.5	ENSMUSG00000105376.5	Gm36535	chr5	lncRNA	predicted gene, 36535
chr5	112354837;112355320	112355163;112357406	+	112354837	112357406	cassetteExon	0.5	100	100	ENSMUST00000186834.7	ENSMUSG00000101683.7	1700028D13Rik	chr5	lncRNA	RIKEN cDNA 1700028D13 gene
chr5	112376044	112376475	-	112376044;112376222	112376175;112376475	ES	0.5	50	50	ENSMUST00000182953.8	ENSMUSG00000097767.9	Miat	chr5	lncRNA	myocardial infarction associated transcript (non-protein coding)
chr5	112372222	112376167	-	112372222	112375921	A5SS&ES	0.5	50	50	ENSMUST00000182953.8	ENSMUSG00000097767.9	Miat	chr5	lncRNA	myocardial infarction associated transcript (non-protein coding)
chr5	112372222	112376167	-	112372222;112376080	112375921;112376167	ES	0.5	50	50	ENSMUST00000181535.9	ENSMUSG00000097767.9	Miat	chr5	lncRNA	myocardial infarction associated transcript (non-protein coding)
chr5	112376044	112376475	-	112376222	112376475	A3SS&ES	0.5	50	50	ENSMUST00000181535.9	ENSMUSG00000097767.9	Miat	chr5	lncRNA	myocardial infarction associated transcript (non-protein coding)
chr5	112372222;112376044	112375921;112376475	-	112372222;112376222	112376167;112376475	MXE	0.5	100	100	ENSMUST00000182258.8	ENSMUSG00000097767.9	Miat	chr5	lncRNA	myocardial infarction associated transcript (non-protein coding)
chr5	112365063	112372168	+	112365063;112366368	112366089;112372168	ES	0.33	50	50	ENSMUST00000212599.2	ENSMUSG00000097986.3	Gm26953	chr5	lncRNA	predicted gene, 26953
chr5	112365063;112365933	112365696;112366089	+	112365063	112366089	cassetteExon	0.5	100	100	ENSMUST00000212599.2	ENSMUSG00000097986.3	Gm26953	chr5	lncRNA	predicted gene, 26953
chr5	112365063;112370688	112370526;112372168	+	112365063;112366368	112366089;112372168	MXE	0.5	100	100	ENSMUST00000212599.2	ENSMUSG00000097986.3	Gm26953	chr5	lncRNA	predicted gene, 26953
chr5	112365063	112366222	+	112365063	112366089	A3SS	0.2	50	50	ENSMUST00000212599.2	ENSMUSG00000097986.3	Gm26953	chr5	lncRNA	predicted gene, 26953
chr5	112366368	112367481	+	112366368	112372168	A3SS	0.5	50	50	ENSMUST00000212599.2	ENSMUSG00000097986.3	Gm26953	chr5	lncRNA	predicted gene, 26953
chr5	112376073	112376598	+	112376073	112378056	A3SS	0.5	50	50	ENSMUST00000212599.2	ENSMUSG00000097986.3	Gm26953	chr5	lncRNA	predicted gene, 26953
chr5	112376042	112378056	+	112376073	112378056	A5SS	0.5	50	50	ENSMUST00000212599.2	ENSMUSG00000097986.3	Gm26953	chr5	lncRNA	predicted gene, 26953
chr5	112365063	112370526	+	112365063	112366089	3pMXE	0.2	50	50	ENSMUST00000212526.2	ENSMUSG00000097986.3	Gm26953	chr5	lncRNA	predicted gene, 26953
chr5	112365063	112372168	+	112365063	112366089	3pMXE	0.2	50	50	ENSMUST00000212526.2	ENSMUSG00000097986.3	Gm26953	chr5	lncRNA	predicted gene, 26953
chr5	112365063	112372168	+	112365063;112370688	112370526;112372168	ES	0.33	50	50	ENSMUST00000212309.2	ENSMUSG00000097986.3	Gm26953	chr5	lncRNA	predicted gene, 26953
chr5	112365063;112366368	112366222;112372168	+	112365063;112370688	112370526;112372168	MXE	0.5	100	100	ENSMUST00000212309.2	ENSMUSG00000097986.3	Gm26953	chr5	lncRNA	predicted gene, 26953
chr5	112365063	112365696	+	112365063	112370526	A3SS	0.2	50	50	ENSMUST00000212309.2	ENSMUSG00000097986.3	Gm26953	chr5	lncRNA	predicted gene, 26953
chr5	112365063	112372168	+	112365063;112366368	112366222;112372168	ES	0.33	50	50	ENSMUST00000212928.2	ENSMUSG00000097986.3	Gm26953	chr5	lncRNA	predicted gene, 26953
chr5	112365063	112365696	+	112365063	112366222	A3SS	0.2	50	50	ENSMUST00000212928.2	ENSMUSG00000097986.3	Gm26953	chr5	lncRNA	predicted gene, 26953
chr5	112365063	112365696	+	112365063	112372168	A3SS	0.2	50	50	ENSMUST00000213051.2	ENSMUSG00000097986.3	Gm26953	chr5	lncRNA	predicted gene, 26953
chr5	112403766	112405239	+	112403713	112405239	A5SS	0.33	50	50	ENSMUST00000031286.13	ENSMUSG00000029343.18	Crybb1	chr5	protein_coding	crystallin, beta B1
chr5	112403816	112405239	+	112403713	112405239	A5SS	0.33	50	50	ENSMUST00000031286.13	ENSMUSG00000029343.18	Crybb1	chr5	protein_coding	crystallin, beta B1
chr5	112403766	112405239	+	112403816	112405239	A5SS	0.33	50	50	ENSMUST00000131673.8	ENSMUSG00000029343.18	Crybb1	chr5	protein_coding	crystallin, beta B1
chr5	112424637	112455432	+	112424637;112451837	112451766;112455432	ES	0.5	50	50	ENSMUST00000031287.12	ENSMUSG00000029344.16	Tpst2	chr5	protein_coding	protein-tyrosine sulfotransferase 2
chr5	112451837	112457555	+	112451837;112456343	112455432;112457555	ES	0.33	50	50	ENSMUST00000031287.12	ENSMUSG00000029344.16	Tpst2	chr5	protein_coding	protein-tyrosine sulfotransferase 2
chr5	112436678	112451766	+	112424637	112451766	A5SS	0.5	50	50	ENSMUST00000031287.12	ENSMUSG00000029344.16	Tpst2	chr5	protein_coding	protein-tyrosine sulfotransferase 2
chr5	112456420	112457555	+	112456343	112457555	A5SS	0.33	50	50	ENSMUST00000031287.12	ENSMUSG00000029344.16	Tpst2	chr5	protein_coding	protein-tyrosine sulfotransferase 2
chr5	112451837	112457555	+	112451837	112455432	3pMXE	0.5	50	50	ENSMUST00000134071.8	ENSMUSG00000029344.16	Tpst2	chr5	protein_coding	protein-tyrosine sulfotransferase 2
chr5	112424637;112451837	112451766;112457555	+	112424637;112456343	112455432;112457555	MXE	0.5	100	100	ENSMUST00000071455.7	ENSMUSG00000029344.16	Tpst2	chr5	protein_coding	protein-tyrosine sulfotransferase 2
chr5	112456343	112457555	+	112451837	112457555	A5SS	0.33	50	50	ENSMUST00000198502.2	ENSMUSG00000029344.16	Tpst2	chr5	protein_coding	protein-tyrosine sulfotransferase 2
chr5	112456420	112457555	+	112451837	112457555	A5SS	0.33	50	50	ENSMUST00000198502.2	ENSMUSG00000029344.16	Tpst2	chr5	protein_coding	protein-tyrosine sulfotransferase 2
chr5	112475536	112477232	+	112475536;112476048	112475828;112477232	ES	0.5	50	50	ENSMUST00000031288.14	ENSMUSG00000029345.14	Tfip11	chr5	protein_coding	tuftelin interacting protein 11
chr5	112474584	112475351	+	112474339	112475351	A5SS	0.5	50	50	ENSMUST00000031288.14	ENSMUSG00000029345.14	Tfip11	chr5	protein_coding	tuftelin interacting protein 11
chr5	112475536	112477232	+	112475536	112475828	3pMXE	0.5	50	50	ENSMUST00000129528.2	ENSMUSG00000029345.14	Tfip11	chr5	protein_coding	tuftelin interacting protein 11
chr5	112486338	112487585	-	112486433	112487585	A3SS	0.5	50	50	ENSMUST00000155756.8	ENSMUSG00000029346.13	Srrd	chr5	protein_coding	SRR1 domain containing
chr5	112485607	112485842	-	112485607	112485868	A5SS	0.5	50	50	ENSMUST00000155756.8	ENSMUSG00000029346.13	Srrd	chr5	protein_coding	SRR1 domain containing
chr5	112491029	112491998	+	112491029	112491910	A3SS	0.33	50	50	ENSMUST00000112359.9	ENSMUSG00000042328.14	Hps4	chr5	protein_coding	HPS4, biogenesis of lysosomal organelles complex 3 subunit 2
chr5	112491029	112492407	+	112491029	112491910	A3SS	0.33	50	50	ENSMUST00000112359.9	ENSMUSG00000042328.14	Hps4	chr5	protein_coding	HPS4, biogenesis of lysosomal organelles complex 3 subunit 2
chr5	112490988	112491910	+	112491029	112491910	A5SS	0.5	50	50	ENSMUST00000112359.9	ENSMUSG00000042328.14	Hps4	chr5	protein_coding	HPS4, biogenesis of lysosomal organelles complex 3 subunit 2
chr5	112490988	112492407	+	112490988	112491910	A3SS	0.5	50	50	ENSMUST00000176737.2	ENSMUSG00000042328.14	Hps4	chr5	protein_coding	HPS4, biogenesis of lysosomal organelles complex 3 subunit 2
chr5	112491029	112491998	+	112491029	112492407	A3SS	0.33	50	50	ENSMUST00000035279.4	ENSMUSG00000042328.14	Hps4	chr5	protein_coding	HPS4, biogenesis of lysosomal organelles complex 3 subunit 2
chr5	112490988	112492407	+	112491029	112492407	A5SS	0.5	50	50	ENSMUST00000035279.4	ENSMUSG00000042328.14	Hps4	chr5	protein_coding	HPS4, biogenesis of lysosomal organelles complex 3 subunit 2
chr5	112534738	112537469	-	112534738	112539024	A5SS	0.5	50	50	ENSMUST00000031291.9	ENSMUSG00000029348.12	Asphd2	chr5	protein_coding	aspartate beta-hydroxylase domain containing 2
chr5	112540121	112542584	-	112540121	112541326	5pMXE	0.25	50	50	ENSMUST00000200227.2	ENSMUSG00000029348.12	Asphd2	chr5	protein_coding	aspartate beta-hydroxylase domain containing 2
chr5	112540121;112541107	112540945;112541326	-	112540121	112541326	cassetteExon	0.5	100	100	ENSMUST00000200227.2	ENSMUSG00000029348.12	Asphd2	chr5	protein_coding	aspartate beta-hydroxylase domain containing 2
chr5	112540121	112541651	-	112540121	112541326	A5SS	0.25	50	50	ENSMUST00000200227.2	ENSMUSG00000029348.12	Asphd2	chr5	protein_coding	aspartate beta-hydroxylase domain containing 2
chr5	112540121	112540945	-	112540121	112542584	A5SS	0.25	50	50	ENSMUST00000196256.2	ENSMUSG00000029348.12	Asphd2	chr5	protein_coding	aspartate beta-hydroxylase domain containing 2
chr5	112540121	112541651	-	112540121	112542584	A5SS	0.25	50	50	ENSMUST00000196256.2	ENSMUSG00000029348.12	Asphd2	chr5	protein_coding	aspartate beta-hydroxylase domain containing 2
chr5	112540121;112541449	112541326;112541651	-	112540121	112541651	cassetteExon	0.5	100	100	ENSMUST00000199906.2	ENSMUSG00000029348.12	Asphd2	chr5	protein_coding	aspartate beta-hydroxylase domain containing 2
chr5	112540121	112540945	-	112540121	112541651	A5SS	0.25	50	50	ENSMUST00000199906.2	ENSMUSG00000029348.12	Asphd2	chr5	protein_coding	aspartate beta-hydroxylase domain containing 2
chr5	112574624	112584149	-	112574624;112576436	112576242;112584149	ES	0.33	50	50	ENSMUST00000079491.14	ENSMUSG00000058153.16	Sez6l	chr5	protein_coding	seizure related 6 homolog like
chr5	112576436	112586268	-	112576436;112584340	112584149;112586268	ES	0.5	50	50	ENSMUST00000079491.14	ENSMUSG00000058153.16	Sez6l	chr5	protein_coding	seizure related 6 homolog like
chr5	112573588	112574592	-	112573591	112574592	A3SS	0.33	50	50	ENSMUST00000079491.14	ENSMUSG00000058153.16	Sez6l	chr5	protein_coding	seizure related 6 homolog like
chr5	112573594	112574592	-	112573591	112574592	A3SS	0.33	50	50	ENSMUST00000079491.14	ENSMUSG00000058153.16	Sez6l	chr5	protein_coding	seizure related 6 homolog like
chr5	112573588	112574592	-	112573594	112574592	A3SS	0.33	50	50	ENSMUST00000212480.2	ENSMUSG00000058153.16	Sez6l	chr5	protein_coding	seizure related 6 homolog like
chr5	112573591	112584149	-	112576436	112584149	A3SS&ES	0.33	50	50	ENSMUST00000212480.2	ENSMUSG00000058153.16	Sez6l	chr5	protein_coding	seizure related 6 homolog like
chr5	112573591;112584340	112584149;112586268	-	112573591;112576436	112574592;112586268	MXE	0.5	100	100	ENSMUST00000200575.5	ENSMUSG00000058153.16	Sez6l	chr5	protein_coding	seizure related 6 homolog like
chr5	112574624;112584340	112584149;112586268	-	112574624;112576436	112576242;112586268	MXE	0.5	100	100	ENSMUST00000200575.5	ENSMUSG00000058153.16	Sez6l	chr5	protein_coding	seizure related 6 homolog like
chr5	112573591	112584149	-	112574624	112584149	A3SS&ES	0.33	50	50	ENSMUST00000197425.2	ENSMUSG00000058153.16	Sez6l	chr5	protein_coding	seizure related 6 homolog like
chr5	112573591;112574624	112574592;112584149	-	112573591	112584149	cassetteExon	0.5	100	100	ENSMUST00000212758.2	ENSMUSG00000058153.16	Sez6l	chr5	protein_coding	seizure related 6 homolog like
chr5	112576436	112586268	-	112584340	112586268	A3SS&ES	0.5	50	50	ENSMUST00000212758.2	ENSMUSG00000058153.16	Sez6l	chr5	protein_coding	seizure related 6 homolog like
chr5	112732042	112733798	-	112732073	112733798	A3SS	0.5	50	50	ENSMUST00000183186.8	ENSMUSG00000097962.8	1700034G24Rik	chr5	lncRNA	RIKEN cDNA 1700034G24 gene
chr5	113019504	113020250	-	113019463	113020250	A3SS	0.5	50	50	ENSMUST00000086617.11	ENSMUSG00000072720.10	Myo18b	chr5	protein_coding	myosin XVIIIb
chr5	112912427	112913701	-	112912427	112923119	A5SS	0.5	50	50	ENSMUST00000086617.11	ENSMUSG00000072720.10	Myo18b	chr5	protein_coding	myosin XVIIIb
chr5	112943367	112943465	+	112943367	112946695	A3SS	0.5	50	50	ENSMUST00000182801.8	ENSMUSG00000098230.8	1700095B10Rik	chr5	lncRNA	RIKEN cDNA 1700095B10 gene
chr5	112943464	112946695	+	112943367	112946695	A5SS	0.5	50	50	ENSMUST00000182801.8	ENSMUSG00000098230.8	1700095B10Rik	chr5	lncRNA	RIKEN cDNA 1700095B10 gene
chr5	113133707	113163589	-	113133707	113163233	5pMXE	0.5	50	50	ENSMUST00000065167.9	ENSMUSG00000042249.12	Grk3	chr5	protein_coding	G protein-coupled receptor kinase 3
chr5	113065801	113066692	-	113064029	113066692	A3SS	0.5	50	50	ENSMUST00000065167.9	ENSMUSG00000042249.12	Grk3	chr5	protein_coding	G protein-coupled receptor kinase 3
chr5	113117174	113121373	-	113117135	113121373	A3SS	0.5	50	50	ENSMUST00000065167.9	ENSMUSG00000042249.12	Grk3	chr5	protein_coding	G protein-coupled receptor kinase 3
chr5	113071910	113073111	-	113071910	113073262	A5SS	0.5	50	50	ENSMUST00000065167.9	ENSMUSG00000042249.12	Grk3	chr5	protein_coding	G protein-coupled receptor kinase 3
chr5	113216452	113216558	-	113213878	113216558	A3SS	0.5	50	50	ENSMUST00000112336.8	ENSMUSG00000042240.15	Crybb2	chr5	protein_coding	crystallin, beta B2
chr5	113213878	113215920	-	113213878	113216558	A5SS	0.5	50	50	ENSMUST00000112336.8	ENSMUSG00000042240.15	Crybb2	chr5	protein_coding	crystallin, beta B2
chr5	113216637	113216788	-	113216637	113217500	A5SS	0.5	50	50	ENSMUST00000112336.8	ENSMUSG00000042240.15	Crybb2	chr5	protein_coding	crystallin, beta B2
chr5	113226417	113227626	-	113226381	113227626	A3SS	0.5	50	50	ENSMUST00000076069.13	ENSMUSG00000029352.15	Crybb3	chr5	protein_coding	crystallin, beta B3
chr5	113228530	113229422	-	113228530	113228898	5pMXE	0.5	50	50	ENSMUST00000118226.8	ENSMUSG00000029352.15	Crybb3	chr5	protein_coding	crystallin, beta B3
chr5	113228446	113228898	-	113228530	113228898	A3SS	0.33	50	50	ENSMUST00000118226.8	ENSMUSG00000029352.15	Crybb3	chr5	protein_coding	crystallin, beta B3
chr5	113228516	113228898	-	113228530	113228898	A3SS	0.33	50	50	ENSMUST00000118226.8	ENSMUSG00000029352.15	Crybb3	chr5	protein_coding	crystallin, beta B3
chr5	113228446	113229422	-	113228516	113229422	A3SS	0.33	50	50	ENSMUST00000119627.8	ENSMUSG00000029352.15	Crybb3	chr5	protein_coding	crystallin, beta B3
chr5	113228530	113229422	-	113228516	113229422	A3SS	0.33	50	50	ENSMUST00000119627.8	ENSMUSG00000029352.15	Crybb3	chr5	protein_coding	crystallin, beta B3
chr5	113228516	113228898	-	113228516	113229422	A5SS	0.5	50	50	ENSMUST00000119627.8	ENSMUSG00000029352.15	Crybb3	chr5	protein_coding	crystallin, beta B3
chr5	113228446	113229422	-	113228446	113228898	5pMXE	0.5	50	50	ENSMUST00000120506.8	ENSMUSG00000029352.15	Crybb3	chr5	protein_coding	crystallin, beta B3
chr5	113228516	113228898	-	113228446	113228898	A3SS	0.33	50	50	ENSMUST00000120506.8	ENSMUSG00000029352.15	Crybb3	chr5	protein_coding	crystallin, beta B3
chr5	113228530	113229422	-	113228446	113229422	A3SS	0.33	50	50	ENSMUST00000117143.8	ENSMUSG00000029352.15	Crybb3	chr5	protein_coding	crystallin, beta B3
chr5	113249443	113310924	-	113249443	113285571	5pMXE	0.33	50	50	ENSMUST00000212276.2	ENSMUSG00000051339.11	2900026A02Rik	chr5	protein_coding	RIKEN cDNA 2900026A02 gene
chr5	113249443	113323071	-	113249443	113285571	5pMXE	0.33	50	50	ENSMUST00000212276.2	ENSMUSG00000051339.11	2900026A02Rik	chr5	protein_coding	RIKEN cDNA 2900026A02 gene
chr5	113249443	113323071	-	113249443	113310924	5pMXE	0.33	50	50	ENSMUST00000050125.9	ENSMUSG00000051339.11	2900026A02Rik	chr5	protein_coding	RIKEN cDNA 2900026A02 gene
chr5	113424038;113425539	113425375;113426999	-	113424038	113426999	cassetteExon	0.5	100	100	ENSMUST00000048112.13	ENSMUSG00000042216.14	Sgsm1	chr5	protein_coding	small G protein signaling modulator 1
chr5	113406252	113406657	-	113403227	113406657	A3SS	0.5	50	50	ENSMUST00000048112.13	ENSMUSG00000042216.14	Sgsm1	chr5	protein_coding	small G protein signaling modulator 1
chr5	113709002	113710300	+	113708819	113710300	A5SS	0.5	50	50	ENSMUST00000094452.4	ENSMUSG00000063430.10	Wscd2	chr5	protein_coding	WSC domain containing 2
chr5	113787523	113788282	-	113754677	113788282	A3SS	0.5	50	50	ENSMUST00000047936.13	ENSMUSG00000042190.13	Cmklr1	chr5	protein_coding	chemokine-like receptor 1
chr5	113754677	113765590	-	113754677	113788282	A5SS	0.33	50	50	ENSMUST00000047936.13	ENSMUSG00000042190.13	Cmklr1	chr5	protein_coding	chemokine-like receptor 1
chr5	113754677	113777215	-	113754677	113788282	A5SS	0.33	50	50	ENSMUST00000047936.13	ENSMUSG00000042190.13	Cmklr1	chr5	protein_coding	chemokine-like receptor 1
chr5	113754677	113777215	-	113754677	113765590	5pMXE	0.33	50	50	ENSMUST00000132065.8	ENSMUSG00000042190.13	Cmklr1	chr5	protein_coding	chemokine-like receptor 1
chr5	113842009	113861761	-	113830880	113861761	A3SS	0.5	50	50	ENSMUST00000162388.8	ENSMUSG00000042184.12	1700069L16Rik	chr5	protein_coding	RIKEN cDNA 1700069L16 gene
chr5	113842009	113861761	-	113842009	113842415	5pMXE	0.5	50	50	ENSMUST00000159233.2	ENSMUSG00000042184.12	1700069L16Rik	chr5	protein_coding	RIKEN cDNA 1700069L16 gene
chr5	113881364	113883108	-	113881364;113882795	113882605;113883108	ES	0.5	50	50	ENSMUST00000019118.8	ENSMUSG00000018974.8	Sart3	chr5	protein_coding	squamous cell carcinoma antigen recognized by T cells 3
chr5	113884853	113886823	-	113884853;113886060	113885984;113886823	ES	0.5	50	50	ENSMUST00000019118.8	ENSMUSG00000018974.8	Sart3	chr5	protein_coding	squamous cell carcinoma antigen recognized by T cells 3
chr5	113884846	113891659	-	113890529	113891659	A3SS&ES	0.5	50	50	ENSMUST00000019118.8	ENSMUSG00000018974.8	Sart3	chr5	protein_coding	squamous cell carcinoma antigen recognized by T cells 3
chr5	113892388	113893431	-	113892432	113893431	A3SS	0.5	50	50	ENSMUST00000019118.8	ENSMUSG00000018974.8	Sart3	chr5	protein_coding	squamous cell carcinoma antigen recognized by T cells 3
chr5	113897387	113899156	-	113897333	113899156	A3SS	0.5	50	50	ENSMUST00000019118.8	ENSMUSG00000018974.8	Sart3	chr5	protein_coding	squamous cell carcinoma antigen recognized by T cells 3
chr5	113881364	113883108	-	113882795	113883108	3pMXE	0.5	50	50	ENSMUST00000198246.2	ENSMUSG00000018974.8	Sart3	chr5	protein_coding	squamous cell carcinoma antigen recognized by T cells 3
chr5	113911157	113912324	+	113911005	113912324	A5SS	0.33	50	50	ENSMUST00000026937.12	ENSMUSG00000025825.13	Iscu	chr5	protein_coding	iron-sulfur cluster assembly enzyme
chr5	113912025	113912324	+	113911005	113912324	A5SS	0.33	50	50	ENSMUST00000026937.12	ENSMUSG00000025825.13	Iscu	chr5	protein_coding	iron-sulfur cluster assembly enzyme
chr5	113915139	113915894	+	113914910	113915894	A5SS	0.33	50	50	ENSMUST00000026937.12	ENSMUSG00000025825.13	Iscu	chr5	protein_coding	iron-sulfur cluster assembly enzyme
chr5	113912025	113912324	+	113911157	113912324	A5SS	0.33	50	50	ENSMUST00000123616.8	ENSMUSG00000025825.13	Iscu	chr5	protein_coding	iron-sulfur cluster assembly enzyme
chr5	113912437	113913279	+	113912437	113915894	A3SS	0.5	50	50	ENSMUST00000145778.8	ENSMUSG00000025825.13	Iscu	chr5	protein_coding	iron-sulfur cluster assembly enzyme
chr5	113914910	113915894	+	113912437	113915894	A5SS	0.33	50	50	ENSMUST00000145778.8	ENSMUSG00000025825.13	Iscu	chr5	protein_coding	iron-sulfur cluster assembly enzyme
chr5	113915139	113915894	+	113912437	113915894	A5SS	0.33	50	50	ENSMUST00000145778.8	ENSMUSG00000025825.13	Iscu	chr5	protein_coding	iron-sulfur cluster assembly enzyme
chr5	113933814;113934537	113934465;113938361	-	113933814	113938361	cassetteExon	0.5	100	100	ENSMUST00000067853.6	ENSMUSG00000054675.6	Tmem119	chr5	protein_coding	transmembrane protein 119
chr5	113956907	113957225	-	113956907	113957245	A5SS	0.33	50	50	ENSMUST00000201931.2	ENSMUSG00000048163.14	Selplg	chr5	protein_coding	selectin, platelet (p-selectin) ligand
chr5	113956907	113957258	-	113956907	113957245	A5SS	0.33	50	50	ENSMUST00000201931.2	ENSMUSG00000048163.14	Selplg	chr5	protein_coding	selectin, platelet (p-selectin) ligand
chr5	113958309	113970490	-	113958309	113968410	5pMXE	0.5	50	50	ENSMUST00000100874.6	ENSMUSG00000048163.14	Selplg	chr5	protein_coding	selectin, platelet (p-selectin) ligand
chr5	113956907	113957258	-	113956907	113957225	A5SS	0.33	50	50	ENSMUST00000201194.4	ENSMUSG00000048163.14	Selplg	chr5	protein_coding	selectin, platelet (p-selectin) ligand
chr5	113988893	113990232	-	113986692	113990232	A3SS	0.5	50	50	ENSMUST00000164980.8	ENSMUSG00000004530.13	Coro1c	chr5	protein_coding	coronin, actin binding protein 1C
chr5	113986692	113987590	-	113986692	113990232	A5SS	0.5	50	50	ENSMUST00000164980.8	ENSMUSG00000004530.13	Coro1c	chr5	protein_coding	coronin, actin binding protein 1C
chr5	113990361	113996764	-	113990361	114003700	A5SS	0.5	50	50	ENSMUST00000164980.8	ENSMUSG00000004530.13	Coro1c	chr5	protein_coding	coronin, actin binding protein 1C
chr5	114003822	114012596	-	114003822	114020019	A5SS	0.5	50	50	ENSMUST00000164980.8	ENSMUSG00000004530.13	Coro1c	chr5	protein_coding	coronin, actin binding protein 1C
chr5	114020218	114020303	-	114020218	114046672	A5SS	0.33	50	50	ENSMUST00000164980.8	ENSMUSG00000004530.13	Coro1c	chr5	protein_coding	coronin, actin binding protein 1C
chr5	114020218	114020812	-	114020218	114046672	A5SS	0.33	50	50	ENSMUST00000164980.8	ENSMUSG00000004530.13	Coro1c	chr5	protein_coding	coronin, actin binding protein 1C
chr5	114020218	114020303	-	114020218	114020812	A5SS	0.33	50	50	ENSMUST00000163264.8	ENSMUSG00000004530.13	Coro1c	chr5	protein_coding	coronin, actin binding protein 1C
chr5	114096969	114099411	-	114096969;114098726	114098661;114099411	ES	0.5	50	50	ENSMUST00000159592.8	ENSMUSG00000042121.17	Ssh1	chr5	protein_coding	slingshot protein phosphatase 1
chr5	114104834	114127707	-	114104834;114108535	114108432;114127707	ES	0.5	50	50	ENSMUST00000159592.8	ENSMUSG00000042121.17	Ssh1	chr5	protein_coding	slingshot protein phosphatase 1
chr5	114103956	114104241	-	114099479	114104241	A3SS	0.5	50	50	ENSMUST00000159592.8	ENSMUSG00000042121.17	Ssh1	chr5	protein_coding	slingshot protein phosphatase 1
chr5	114158068	114161889	+	114158068;114159102	114158985;114161889	ES	0.5	50	50	ENSMUST00000112292.9	ENSMUSG00000042096.16	Dao	chr5	protein_coding	D-amino acid oxidase
chr5	114142911	114147891	+	114141997	114147891	A5SS	0.5	50	50	ENSMUST00000112292.9	ENSMUSG00000042096.16	Dao	chr5	protein_coding	D-amino acid oxidase
chr5	114203747;114204014	114203848;114229213	-	114203747	114229213	cassetteExon	0.5	100	100	ENSMUST00000058472.13	ENSMUSG00000042078.15	Svop	chr5	protein_coding	SV2 related protein
chr5	114203014	114203182	-	114203014	114203587	A5SS	0.5	50	50	ENSMUST00000058472.13	ENSMUSG00000042078.15	Svop	chr5	protein_coding	SV2 related protein
chr5	114203829	114224731	+	114203829	114240444	A3SS	0.5	50	50	ENSMUST00000202603.4	ENSMUSG00000029592.12	Usp30	chr5	protein_coding	ubiquitin specific peptidase 30
chr5	114238576	114240444	+	114203829	114240444	A5SS	0.5	50	50	ENSMUST00000202603.4	ENSMUSG00000029592.12	Usp30	chr5	protein_coding	ubiquitin specific peptidase 30
chr5	114249276	114249933	+	114249276	114249930	A3SS	0.5	50	50	ENSMUST00000031588.12	ENSMUSG00000029592.12	Usp30	chr5	protein_coding	ubiquitin specific peptidase 30
chr5	114265830	114266022	-	114265830	114265937	A5SS	0.33	50	50	ENSMUST00000053657.13	ENSMUSG00000044339.13	Alkbh2	chr5	protein_coding	alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase
chr5	114265830	114266144	-	114265830	114265937	A5SS	0.33	50	50	ENSMUST00000053657.13	ENSMUSG00000044339.13	Alkbh2	chr5	protein_coding	alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase
chr5	114265830	114266022	-	114265830	114266144	A5SS	0.33	50	50	ENSMUST00000112279.2	ENSMUSG00000044339.13	Alkbh2	chr5	protein_coding	alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase
chr5	114270337	114274408	+	114270337;114274022	114273925;114274408	ES	0.5	50	50	ENSMUST00000031587.13	ENSMUSG00000029591.15	Ung	chr5	protein_coding	uracil DNA glycosylase
chr5	114270147	114270242	+	114269574	114270242	A5SS	0.5	50	50	ENSMUST00000031587.13	ENSMUSG00000029591.15	Ung	chr5	protein_coding	uracil DNA glycosylase
chr5	114314251	114322111	+	114304201	114322111	A5SS	0.5	50	50	ENSMUST00000102582.8	ENSMUSG00000042010.17	Acacb	chr5	protein_coding	acetyl-Coenzyme A carboxylase beta
chr5	114338147	114338301	+	114336401	114338301	A5SS	0.5	50	50	ENSMUST00000102582.8	ENSMUSG00000042010.17	Acacb	chr5	protein_coding	acetyl-Coenzyme A carboxylase beta
chr5	114397907	114398927	-	114397907;114398538	114398411;114398927	ES	0.5	50	50	ENSMUST00000044790.12	ENSMUSG00000042002.12	Foxn4	chr5	protein_coding	forkhead box N4
chr5	114399040	114399136	-	114399046	114399136	A3SS	0.5	50	50	ENSMUST00000044790.12	ENSMUSG00000042002.12	Foxn4	chr5	protein_coding	forkhead box N4
chr5	114401215	114410982	-	114401215	114411034	A5SS	0.5	50	50	ENSMUST00000044790.12	ENSMUSG00000042002.12	Foxn4	chr5	protein_coding	forkhead box N4
chr5	114397907	114398927	-	114398538	114398927	3pMXE	0.5	50	50	ENSMUST00000144050.2	ENSMUSG00000042002.12	Foxn4	chr5	protein_coding	forkhead box N4
chr5	114497665	114498546	+	114497665;114497860	114497805;114498546	ES	0.5	50	50	ENSMUST00000169347.6	ENSMUSG00000066952.12	Myo1h	chr5	protein_coding	myosin 1H
chr5	114497860	114498618	+	114497860	114498546	A3SS	0.5	50	50	ENSMUST00000169347.6	ENSMUSG00000066952.12	Myo1h	chr5	protein_coding	myosin 1H
chr5	114499174	114499261	+	114499174	114499288	A3SS	0.5	50	50	ENSMUST00000169347.6	ENSMUSG00000066952.12	Myo1h	chr5	protein_coding	myosin 1H
chr5	114495050	114495980	+	114495074	114495980	A5SS	0.33	50	50	ENSMUST00000169347.6	ENSMUSG00000066952.12	Myo1h	chr5	protein_coding	myosin 1H
chr5	114495629	114495980	+	114495074	114495980	A5SS	0.33	50	50	ENSMUST00000169347.6	ENSMUSG00000066952.12	Myo1h	chr5	protein_coding	myosin 1H
chr5	114497665;114498681	114498546;114499104	+	114497665	114499104	cassetteExon	0.5	100	100	ENSMUST00000124316.8	ENSMUSG00000066952.12	Myo1h	chr5	protein_coding	myosin 1H
chr5	114497665	114497805	+	114497665	114499104	A3SS	0.33	50	50	ENSMUST00000124316.8	ENSMUSG00000066952.12	Myo1h	chr5	protein_coding	myosin 1H
chr5	114495629	114495980	+	114495050	114495980	A5SS	0.33	50	50	ENSMUST00000152694.8	ENSMUSG00000066952.12	Myo1h	chr5	protein_coding	myosin 1H
chr5	114497665	114498546	+	114497665	114497805	A3SS&ES	0.33	50	50	ENSMUST00000196467.5	ENSMUSG00000066952.12	Myo1h	chr5	protein_coding	myosin 1H
chr5	114507088	114512957	-	114507088;114508289	114508120;114512957	ES	0.5	50	50	ENSMUST00000102581.11	ENSMUSG00000001098.16	Kctd10	chr5	protein_coding	potassium channel tetramerisation domain containing 10
chr5	114507091	114508120	-	114507088	114508120	A3SS	0.5	50	50	ENSMUST00000102581.11	ENSMUSG00000001098.16	Kctd10	chr5	protein_coding	potassium channel tetramerisation domain containing 10
chr5	114508289	114510094	-	114508289	114512957	A5SS	0.5	50	50	ENSMUST00000102581.11	ENSMUSG00000001098.16	Kctd10	chr5	protein_coding	potassium channel tetramerisation domain containing 10
chr5	114507088	114512957	-	114508289	114512957	A3SS&ES	0.5	50	50	ENSMUST00000001125.6	ENSMUSG00000001098.16	Kctd10	chr5	protein_coding	potassium channel tetramerisation domain containing 10
chr5	114507088	114512957	-	114507088	114508120	5pMXE	0.5	50	50	ENSMUST00000135170.8	ENSMUSG00000001098.16	Kctd10	chr5	protein_coding	potassium channel tetramerisation domain containing 10
chr5	114525339	114526784	+	114525339;114525562	114525442;114526784	ES	0.5	50	50	ENSMUST00000074002.12	ENSMUSG00000029577.14	Ube3b	chr5	protein_coding	ubiquitin protein ligase E3B
chr5	114528547	114531138	+	114528547;114530244	114530159;114531138	ES	0.5	50	50	ENSMUST00000074002.12	ENSMUSG00000029577.14	Ube3b	chr5	protein_coding	ubiquitin protein ligase E3B
chr5	114539502	114540583	+	114539498	114540583	A5SS	0.5	50	50	ENSMUST00000074002.12	ENSMUSG00000029577.14	Ube3b	chr5	protein_coding	ubiquitin protein ligase E3B
chr5	114540877	114544233	+	114542772	114544233	A5SS&ES	0.33	50	50	ENSMUST00000074002.12	ENSMUSG00000029577.14	Ube3b	chr5	protein_coding	ubiquitin protein ligase E3B
chr5	114542776	114544233	+	114542772	114544233	A5SS	0.33	50	50	ENSMUST00000074002.12	ENSMUSG00000029577.14	Ube3b	chr5	protein_coding	ubiquitin protein ligase E3B
chr5	114528547	114531138	+	114528547	114530159	3pMXE	0.5	50	50	ENSMUST00000151809.3	ENSMUSG00000029577.14	Ube3b	chr5	protein_coding	ubiquitin protein ligase E3B
chr5	114540877	114544233	+	114542776	114544233	A5SS&ES	0.33	50	50	ENSMUST00000196651.5	ENSMUSG00000029577.14	Ube3b	chr5	protein_coding	ubiquitin protein ligase E3B
chr5	114574604;114575183	114574771;114575879	-	114574604	114575879	cassetteExon	0.5	100	100	ENSMUST00000112245.6	ENSMUSG00000029575.18	Mmab	chr5	protein_coding	methylmalonic aciduria (cobalamin deficiency) cblB type homolog (human)
chr5	114582424	114583449	+	114582424;114582750	114582713;114583449	ES	0.5	50	50	ENSMUST00000137167.8	ENSMUSG00000041939.15	Mvk	chr5	protein_coding	mevalonate kinase
chr5	114584367	114588302	+	114584367	114588338	A3SS	0.5	50	50	ENSMUST00000137167.8	ENSMUSG00000041939.15	Mvk	chr5	protein_coding	mevalonate kinase
chr5	114593548	114598408	+	114593548	114593951	A3SS&ES	0.5	50	50	ENSMUST00000112239.9	ENSMUSG00000041939.15	Mvk	chr5	protein_coding	mevalonate kinase
chr5	114768963	114772577	-	114768963;114771375	114771196;114772577	ES	0.5	50	50	ENSMUST00000071968.9	ENSMUSG00000014158.13	Trpv4	chr5	protein_coding	transient receptor potential cation channel, subfamily V, member 4
chr5	114772875	114774371	-	114772875;114773648	114773508;114774371	ES	0.33	50	50	ENSMUST00000071968.9	ENSMUSG00000014158.13	Trpv4	chr5	protein_coding	transient receptor potential cation channel, subfamily V, member 4
chr5	114767081	114768011	-	114767034	114768011	A3SS	0.5	50	50	ENSMUST00000071968.9	ENSMUSG00000014158.13	Trpv4	chr5	protein_coding	transient receptor potential cation channel, subfamily V, member 4
chr5	114774251	114774371	-	114773648	114774371	A3SS	0.33	50	50	ENSMUST00000071968.9	ENSMUSG00000014158.13	Trpv4	chr5	protein_coding	transient receptor potential cation channel, subfamily V, member 4
chr5	114782994	114796403	-	114782991	114796403	A3SS	0.5	50	50	ENSMUST00000071968.9	ENSMUSG00000014158.13	Trpv4	chr5	protein_coding	transient receptor potential cation channel, subfamily V, member 4
chr5	114772875	114774371	-	114772875	114773508	5pMXE	0.5	50	50	ENSMUST00000133019.8	ENSMUSG00000014158.13	Trpv4	chr5	protein_coding	transient receptor potential cation channel, subfamily V, member 4
chr5	114774251	114774371	-	114772875	114774371	A3SS	0.33	50	50	ENSMUST00000112222.8	ENSMUSG00000014158.13	Trpv4	chr5	protein_coding	transient receptor potential cation channel, subfamily V, member 4
chr5	114812265	114814383	-	114812265	114814326	A5SS	0.5	50	50	ENSMUST00000012028.14	ENSMUSG00000011884.14	Gltp	chr5	protein_coding	glycolipid transfer protein
chr5	114846899;114847273	114847095;114847368	+	114846899	114847368	cassetteExon	0.5	100	100	ENSMUST00000094441.11	ENSMUSG00000002486.16	Tchp	chr5	protein_coding	trichoplein, keratin filament binding
chr5	114852862	114853683	+	114852862	114853614	A3SS	0.5	50	50	ENSMUST00000094441.11	ENSMUSG00000002486.16	Tchp	chr5	protein_coding	trichoplein, keratin filament binding
chr5	114853192	114853614	+	114852862	114853614	A5SS	0.5	50	50	ENSMUST00000094441.11	ENSMUSG00000002486.16	Tchp	chr5	protein_coding	trichoplein, keratin filament binding
chr5	114872004	114877094	-	114872004;114875498	114875409;114877094	ES	0.5	50	50	ENSMUST00000112185.9	ENSMUSG00000041890.18	Git2	chr5	protein_coding	GIT ArfGAP 2
chr5	114907811	114913453	-	114907811	114911375	5pMXE	0.5	50	50	ENSMUST00000112185.9	ENSMUSG00000041890.18	Git2	chr5	protein_coding	GIT ArfGAP 2
chr5	114872004;114881941	114881837;114883490	-	114872004;114877342	114875409;114883490	MXE	0.5	100	100	ENSMUST00000112185.9	ENSMUSG00000041890.18	Git2	chr5	protein_coding	GIT ArfGAP 2
chr5	114877342;114881941	114881792;114883490	-	114877342	114883490	cassetteExon	0.5	100	100	ENSMUST00000112185.9	ENSMUSG00000041890.18	Git2	chr5	protein_coding	GIT ArfGAP 2
chr5	114877342;114881941	114881837;114883490	-	114877342	114883490	cassetteExon	0.5	100	100	ENSMUST00000112185.9	ENSMUSG00000041890.18	Git2	chr5	protein_coding	GIT ArfGAP 2
chr5	114890388;114891077	114891072;114891340	-	114890388	114891340	cassetteExon	0.5	100	100	ENSMUST00000112185.9	ENSMUSG00000041890.18	Git2	chr5	protein_coding	GIT ArfGAP 2
chr5	114890388;114891214	114891072;114891340	-	114890388	114891340	cassetteExon	0.5	100	100	ENSMUST00000112185.9	ENSMUSG00000041890.18	Git2	chr5	protein_coding	GIT ArfGAP 2
chr5	114890388;114891214	114891209;114891340	-	114890388	114891340	cassetteExon	0.5	100	100	ENSMUST00000112185.9	ENSMUSG00000041890.18	Git2	chr5	protein_coding	GIT ArfGAP 2
chr5	114890391	114891340	-	114890388	114891340	A3SS	0.25	50	50	ENSMUST00000112185.9	ENSMUSG00000041890.18	Git2	chr5	protein_coding	GIT ArfGAP 2
chr5	114872004;114881941	114881837;114883490	-	114872004;114877342	114877094;114883490	MXE	0.5	100	100	ENSMUST00000178440.8	ENSMUSG00000041890.18	Git2	chr5	protein_coding	GIT ArfGAP 2
chr5	114890388;114891214	114891209;114891340	-	114890388;114891077	114891072;114891340	MXE	0.5	100	100	ENSMUST00000178440.8	ENSMUSG00000041890.18	Git2	chr5	protein_coding	GIT ArfGAP 2
chr5	114890391	114891340	-	114891077	114891340	A3SS&ES	0.25	50	50	ENSMUST00000178440.8	ENSMUSG00000041890.18	Git2	chr5	protein_coding	GIT ArfGAP 2
chr5	114877342	114883490	-	114877342	114881792	5pMXE	0.33	50	50	ENSMUST00000146044.8	ENSMUSG00000041890.18	Git2	chr5	protein_coding	GIT ArfGAP 2
chr5	114872004	114881837	-	114872004	114877094	A5SS&ES	0.33	50	50	ENSMUST00000146044.8	ENSMUSG00000041890.18	Git2	chr5	protein_coding	GIT ArfGAP 2
chr5	114877342	114881837	-	114877342	114881792	A5SS	0.33	50	50	ENSMUST00000146044.8	ENSMUSG00000041890.18	Git2	chr5	protein_coding	GIT ArfGAP 2
chr5	114890391	114891340	-	114890391;114891214	114891209;114891340	ES	0.25	50	50	ENSMUST00000112183.8	ENSMUSG00000041890.18	Git2	chr5	protein_coding	GIT ArfGAP 2
chr5	114890388	114891209	-	114890391	114891209	A3SS	0.5	50	50	ENSMUST00000112183.8	ENSMUSG00000041890.18	Git2	chr5	protein_coding	GIT ArfGAP 2
chr5	114890388	114891340	-	114891214	114891340	A3SS&ES	0.25	50	50	ENSMUST00000112183.8	ENSMUSG00000041890.18	Git2	chr5	protein_coding	GIT ArfGAP 2
chr5	114891077	114891340	-	114891214	114891340	A3SS&ES	0.25	50	50	ENSMUST00000112183.8	ENSMUSG00000041890.18	Git2	chr5	protein_coding	GIT ArfGAP 2
chr5	114872004	114881837	-	114872004	114875409	A5SS&ES	0.33	50	50	ENSMUST00000086564.11	ENSMUSG00000041890.18	Git2	chr5	protein_coding	GIT ArfGAP 2
chr5	114872004;114877342	114877094;114881837	-	114872004	114881837	cassetteExon	0.5	100	100	ENSMUST00000155908.8	ENSMUSG00000041890.18	Git2	chr5	protein_coding	GIT ArfGAP 2
chr5	114890391	114891340	-	114891214	114891340	A3SS&ES	0.25	50	50	ENSMUST00000131993.8	ENSMUSG00000041890.18	Git2	chr5	protein_coding	GIT ArfGAP 2
chr5	114904618	114911375	-	114904618	114905157	A5SS&ES	0.5	50	50	ENSMUST00000131016.2	ENSMUSG00000041890.18	Git2	chr5	protein_coding	GIT ArfGAP 2
chr5	114907811	114911375	-	114904618	114911375	A3SS	0.5	50	50	ENSMUST00000131582.8	ENSMUSG00000041890.18	Git2	chr5	protein_coding	GIT ArfGAP 2
chr5	114937602	114939717	+	114937602;114938873	114938766;114939717	ES	0.5	50	50	ENSMUST00000102578.11	ENSMUSG00000041870.18	Ankrd13a	chr5	protein_coding	ankyrin repeat domain 13a
chr5	114938873	114941618	+	114938873;114939877	114939717;114941618	ES	0.5	50	50	ENSMUST00000102578.11	ENSMUSG00000041870.18	Ankrd13a	chr5	protein_coding	ankyrin repeat domain 13a
chr5	114934976	114935916	+	114934976	114935914	A3SS	0.5	50	50	ENSMUST00000102578.11	ENSMUSG00000041870.18	Ankrd13a	chr5	protein_coding	ankyrin repeat domain 13a
chr5	114935975	114936579	+	114935975	114936582	A3SS	0.5	50	50	ENSMUST00000102578.11	ENSMUSG00000041870.18	Ankrd13a	chr5	protein_coding	ankyrin repeat domain 13a
chr5	114937602;114938873	114938766;114941618	+	114937602;114939877	114939717;114941618	MXE	0.5	100	100	ENSMUST00000129001.9	ENSMUSG00000041870.18	Ankrd13a	chr5	protein_coding	ankyrin repeat domain 13a
chr5	114947392	114961374	-	114947392	114951841	5pMXE	0.5	50	50	ENSMUST00000112160.4	ENSMUSG00000072694.9	1500011B03Rik	chr5	protein_coding	RIKEN cDNA 1500011B03 gene
chr5	114951266	114951841	-	114947392	114951841	A3SS	0.5	50	50	ENSMUST00000112160.4	ENSMUSG00000072694.9	1500011B03Rik	chr5	protein_coding	RIKEN cDNA 1500011B03 gene
chr5	114960786	114961374	-	114947392	114961374	A3SS	0.5	50	50	ENSMUST00000140374.2	ENSMUSG00000072694.9	1500011B03Rik	chr5	protein_coding	RIKEN cDNA 1500011B03 gene
chr5	115012409	115014278	+	115012409	115016026	A3SS	0.5	50	50	ENSMUST00000031547.12	ENSMUSG00000029564.13	4930519G04Rik	chr5	protein_coding	RIKEN cDNA 4930519G04 gene
chr5	115003653	115008216	+	115001610	115008216	A5SS	0.5	50	50	ENSMUST00000031547.12	ENSMUSG00000029564.13	4930519G04Rik	chr5	protein_coding	RIKEN cDNA 4930519G04 gene
chr5	115035923	115039301	+	115035923;115038091	115037803;115039301	ES	0.5	50	50	ENSMUST00000031542.13	ENSMUSG00000029561.18	Oasl2	chr5	protein_coding	2'-5' oligoadenylate synthetase-like 2
chr5	115039476;115040434	115040334;115042893	+	115039476	115042893	cassetteExon	0.5	100	100	ENSMUST00000031542.13	ENSMUSG00000029561.18	Oasl2	chr5	protein_coding	2'-5' oligoadenylate synthetase-like 2
chr5	115035923	115039301	+	115035923	115037803	3pMXE	0.5	50	50	ENSMUST00000146072.8	ENSMUSG00000029561.18	Oasl2	chr5	protein_coding	2'-5' oligoadenylate synthetase-like 2
chr5	115035212	115035644	+	115035508	115035644	A5SS	0.5	50	50	ENSMUST00000146072.8	ENSMUSG00000029561.18	Oasl2	chr5	protein_coding	2'-5' oligoadenylate synthetase-like 2
chr5	115068062	115073980	+	115068062;115071023	115070782;115073980	ES	0.5	50	50	ENSMUST00000031540.11	ENSMUSG00000041827.16	Oasl1	chr5	protein_coding	2'-5' oligoadenylate synthetase-like 1
chr5	115061668	115067981	+	115061668	115066082	A3SS&ES	0.5	50	50	ENSMUST00000031540.11	ENSMUSG00000041827.16	Oasl1	chr5	protein_coding	2'-5' oligoadenylate synthetase-like 1
chr5	115074127	115075109	+	115074127	115074977	A3SS	0.5	50	50	ENSMUST00000031540.11	ENSMUSG00000041827.16	Oasl1	chr5	protein_coding	2'-5' oligoadenylate synthetase-like 1
chr5	115068062	115073980	+	115068062	115070782	3pMXE	0.5	50	50	ENSMUST00000152329.2	ENSMUSG00000041827.16	Oasl1	chr5	protein_coding	2'-5' oligoadenylate synthetase-like 1
chr5	115083966	115084077	+	115083887	115084077	A5SS	0.5	50	50	ENSMUST00000031538.9	ENSMUSG00000029559.16	2210016L21Rik	chr5	protein_coding	RIKEN cDNA 2210016L21 gene
chr5	115091846	115093875	-	115091846;115093550	115093309;115093875	ES	0.5	50	50	ENSMUST00000031535.12	ENSMUSG00000029556.13	Hnf1a	chr5	protein_coding	HNF1 homeobox A
chr5	115094061	115108578	-	115094061;115098274	115098075;115108578	ES	0.5	50	50	ENSMUST00000031535.12	ENSMUSG00000029556.13	Hnf1a	chr5	protein_coding	HNF1 homeobox A
chr5	115108096	115135824	+	115123944	115135824	A5SS&ES	0.5	50	50	ENSMUST00000129609.2	ENSMUSG00000086054.3	Hnf1aos1	chr5	lncRNA	HNF1 homeobox A, opposite strand 1
chr5	115123353	115123808	+	115107136	115123808	A5SS	0.5	50	50	ENSMUST00000129609.2	ENSMUSG00000086054.3	Hnf1aos1	chr5	lncRNA	HNF1 homeobox A, opposite strand 1
chr5	115108096	115117288	+	115108096	115135824	A3SS	0.5	50	50	ENSMUST00000125010.3	ENSMUSG00000086054.3	Hnf1aos1	chr5	lncRNA	HNF1 homeobox A, opposite strand 1
chr5	115199698	115220280	+	115199698;115212962	115212874;115220280	ES	0.5	50	50	ENSMUST00000031530.9	ENSMUSG00000029550.12	Sppl3	chr5	protein_coding	signal peptide peptidase 3
chr5	115149674;115158930	115158793;115199621	+	115149674	115199621	cassetteExon	0.5	100	100	ENSMUST00000031530.9	ENSMUSG00000029550.12	Sppl3	chr5	protein_coding	signal peptide peptidase 3
chr5	115241587	115245952	-	115241587	115248252	A5SS	0.5	50	50	ENSMUST00000100847.5	ENSMUSG00000072692.8	Rpl37rt	chr5	transcribed_processed_pseudogene	ribosomal protein L37, retrotransposed
chr5	115251272	115257284	-	115251272;115255787	115255624;115257284	ES	0.5	50	50	ENSMUST00000131726.8	ENSMUSG00000029545.14	Acads	chr5	protein_coding	acyl-Coenzyme A dehydrogenase, short chain
chr5	115314329	115324071	-	115314329;115319030	115318851;115324071	ES	0.5	50	50	ENSMUST00000031519.14	ENSMUSG00000029544.17	Cabp1	chr5	protein_coding	calcium binding protein 1
chr5	115314329	115318847	-	115314329	115318851	A5SS	0.33	50	50	ENSMUST00000031519.14	ENSMUSG00000029544.17	Cabp1	chr5	protein_coding	calcium binding protein 1
chr5	115319030	115319459	-	115319030	115324071	A5SS	0.5	50	50	ENSMUST00000031519.14	ENSMUSG00000029544.17	Cabp1	chr5	protein_coding	calcium binding protein 1
chr5	115314329	115318847	-	115314329	115331713	A5SS	0.25	50	50	ENSMUST00000112113.8	ENSMUSG00000029544.17	Cabp1	chr5	protein_coding	calcium binding protein 1
chr5	115314329	115318851	-	115314329	115331713	A5SS	0.25	50	50	ENSMUST00000112113.8	ENSMUSG00000029544.17	Cabp1	chr5	protein_coding	calcium binding protein 1
chr5	115314329	115324071	-	115314329	115331713	A5SS	0.25	50	50	ENSMUST00000112113.8	ENSMUSG00000029544.17	Cabp1	chr5	protein_coding	calcium binding protein 1
chr5	115314329;115319030	115318847;115324071	-	115314329	115324071	cassetteExon	0.5	100	100	ENSMUST00000112112.2	ENSMUSG00000029544.17	Cabp1	chr5	protein_coding	calcium binding protein 1
chr5	115314329	115324071	-	115314329	115318847	5pMXE	0.25	50	50	ENSMUST00000151775.2	ENSMUSG00000029544.17	Cabp1	chr5	protein_coding	calcium binding protein 1
chr5	115376128	115378221	+	115376128;115376336	115376194;115378221	ES	0.5	50	50	ENSMUST00000081497.13	ENSMUSG00000060152.15	Pop5	chr5	protein_coding	processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)
chr5	115378415	115378532	+	115378370	115378532	A5SS	0.5	50	50	ENSMUST00000081497.13	ENSMUSG00000060152.15	Pop5	chr5	protein_coding	processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)
chr5	115376128	115378221	+	115376336	115378221	A5SS	0.5	50	50	ENSMUST00000154800.2	ENSMUSG00000060152.15	Pop5	chr5	protein_coding	processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)
chr5	115380750	115383908	-	115380750;115382180	115382080;115383908	ES	0.5	50	50	ENSMUST00000112097.8	ENSMUSG00000041740.17	Rnf10	chr5	protein_coding	ring finger protein 10
chr5	115395232;115397605	115397553;115398178	-	115395232	115398178	cassetteExon	0.5	100	100	ENSMUST00000112097.8	ENSMUSG00000041740.17	Rnf10	chr5	protein_coding	ring finger protein 10
chr5	115380117	115380452	-	115380120	115380452	A3SS	0.5	50	50	ENSMUST00000112097.8	ENSMUSG00000041740.17	Rnf10	chr5	protein_coding	ring finger protein 10
chr5	115386768	115386974	-	115386774	115386974	A3SS	0.5	50	50	ENSMUST00000112097.8	ENSMUSG00000041740.17	Rnf10	chr5	protein_coding	ring finger protein 10
chr5	115387229	115387456	-	115387232	115387456	A3SS	0.5	50	50	ENSMUST00000112097.8	ENSMUSG00000041740.17	Rnf10	chr5	protein_coding	ring finger protein 10
chr5	115380750	115383908	-	115382180	115383908	3pMXE	0.5	50	50	ENSMUST00000128954.2	ENSMUSG00000041740.17	Rnf10	chr5	protein_coding	ring finger protein 10
chr5	115429099	115433725	+	115429099;115432974	115432886;115433725	ES	0.5	50	50	ENSMUST00000040421.11	ENSMUSG00000041733.11	Coq5	chr5	protein_coding	coenzyme Q5 methyltransferase
chr5	115437956	115438572	-	115436892	115438572	A3SS	0.5	50	50	ENSMUST00000009157.4	ENSMUSG00000009013.6	Dynll1	chr5	protein_coding	dynein light chain LC8-type 1
chr5	115436892	115437359	-	115436892	115438572	A5SS	0.5	50	50	ENSMUST00000009157.4	ENSMUSG00000009013.6	Dynll1	chr5	protein_coding	dynein light chain LC8-type 1
chr5	115439292;115448701	115448544;115455531	+	115439292	115455531	cassetteExon	0.5	100	100	ENSMUST00000149609.2	ENSMUSG00000086368.3	Gm13830	chr5	lncRNA	predicted gene 13830
chr5	115439292	115439457	+	115439292	115455531	A3SS	0.25	50	50	ENSMUST00000149609.2	ENSMUSG00000086368.3	Gm13830	chr5	lncRNA	predicted gene 13830
chr5	115439292	115439809	+	115439292	115455531	A3SS	0.25	50	50	ENSMUST00000149609.2	ENSMUSG00000086368.3	Gm13830	chr5	lncRNA	predicted gene 13830
chr5	115439292	115439457	+	115439292	115448544	A3SS	0.25	50	50	ENSMUST00000144202.2	ENSMUSG00000086368.3	Gm13830	chr5	lncRNA	predicted gene 13830
chr5	115439292	115439809	+	115439292	115448544	A3SS	0.25	50	50	ENSMUST00000144202.2	ENSMUSG00000086368.3	Gm13830	chr5	lncRNA	predicted gene 13830
chr5	115439292	115439457	+	115439292	115439809	A3SS	0.5	50	50	ENSMUST00000124378.2	ENSMUSG00000086368.3	Gm13830	chr5	lncRNA	predicted gene 13830
chr5	115465558;115466763	115466406;115468557	+	115465558	115468557	cassetteExon	0.5	100	100	ENSMUST00000031513.14	ENSMUSG00000029538.15	Srsf9	chr5	protein_coding	serine and arginine-rich splicing factor 9
chr5	115468717;115469598	115469509;115470176	+	115468717	115470176	cassetteExon	0.5	100	100	ENSMUST00000031513.14	ENSMUSG00000029538.15	Srsf9	chr5	protein_coding	serine and arginine-rich splicing factor 9
chr5	115468717;115469598	115469520;115470176	+	115468717	115470176	cassetteExon	0.5	100	100	ENSMUST00000031513.14	ENSMUSG00000029538.15	Srsf9	chr5	protein_coding	serine and arginine-rich splicing factor 9
chr5	115465757	115468557	+	115465558	115468557	A5SS	0.33	50	50	ENSMUST00000031513.14	ENSMUSG00000029538.15	Srsf9	chr5	protein_coding	serine and arginine-rich splicing factor 9
chr5	115468717	115469520	+	115468717	115469509	A3SS	0.33	50	50	ENSMUST00000209604.2	ENSMUSG00000029538.15	Srsf9	chr5	protein_coding	serine and arginine-rich splicing factor 9
chr5	115465757	115466406	+	115465558	115466406	A5SS	0.5	50	50	ENSMUST00000209604.2	ENSMUSG00000029538.15	Srsf9	chr5	protein_coding	serine and arginine-rich splicing factor 9
chr5	115465757	115468557	+	115466763	115468557	A5SS&ES	0.33	50	50	ENSMUST00000209604.2	ENSMUSG00000029538.15	Srsf9	chr5	protein_coding	serine and arginine-rich splicing factor 9
chr5	115465757;115466763	115466406;115468557	+	115465757	115468557	cassetteExon	0.5	100	100	ENSMUST00000144000.8	ENSMUSG00000029538.15	Srsf9	chr5	protein_coding	serine and arginine-rich splicing factor 9
chr5	115497327	115506913	+	115497327	115548674	A3SS	0.5	50	50	ENSMUST00000151159.2	ENSMUSG00000087292.2	Gm13832	chr5	lncRNA	predicted gene 13832
chr5	115583534	115588274	+	115583534;115585245	115585189;115588274	ES	0.5	50	50	ENSMUST00000150779.8	ENSMUSG00000054256.12	Msi1	chr5	protein_coding	musashi RNA-binding protein 1
chr5	115567865	115568040	+	115567865	115568036	A3SS	0.5	50	50	ENSMUST00000150779.8	ENSMUSG00000054256.12	Msi1	chr5	protein_coding	musashi RNA-binding protein 1
chr5	115588342	115588879	+	115588342	115588846	A3SS	0.5	50	50	ENSMUST00000150779.8	ENSMUSG00000054256.12	Msi1	chr5	protein_coding	musashi RNA-binding protein 1
chr5	115571577	115571911	+	115568947	115571911	A5SS	0.5	50	50	ENSMUST00000150779.8	ENSMUSG00000054256.12	Msi1	chr5	protein_coding	musashi RNA-binding protein 1
chr5	115572518	115573513	+	115571952	115573513	A5SS	0.33	50	50	ENSMUST00000150779.8	ENSMUSG00000054256.12	Msi1	chr5	protein_coding	musashi RNA-binding protein 1
chr5	115573190	115573513	+	115571952	115573513	A5SS	0.33	50	50	ENSMUST00000150779.8	ENSMUSG00000054256.12	Msi1	chr5	protein_coding	musashi RNA-binding protein 1
chr5	115583534	115588274	+	115583534	115585189	3pMXE	0.5	50	50	ENSMUST00000151444.8	ENSMUSG00000054256.12	Msi1	chr5	protein_coding	musashi RNA-binding protein 1
chr5	115573190	115573513	+	115572518	115573513	A5SS	0.33	50	50	ENSMUST00000145840.8	ENSMUSG00000054256.12	Msi1	chr5	protein_coding	musashi RNA-binding protein 1
chr5	115604379;115610179	115610052;115612568	+	115604379;115609000	115608841;115612568	MXE	0.5	100	100	ENSMUST00000145785.8	ENSMUSG00000029522.13	Pla2g1b	chr5	protein_coding	phospholipase A2, group IB, pancreas
chr5	115609000;115610179	115609755;115612568	+	115609000	115612568	cassetteExon	0.5	100	100	ENSMUST00000145785.8	ENSMUSG00000029522.13	Pla2g1b	chr5	protein_coding	phospholipase A2, group IB, pancreas
chr5	115609000;115610179	115610052;115612568	+	115609000	115612568	cassetteExon	0.5	100	100	ENSMUST00000145785.8	ENSMUSG00000029522.13	Pla2g1b	chr5	protein_coding	phospholipase A2, group IB, pancreas
chr5	115604379	115608844	+	115604379	115608841	A3SS	0.33	50	50	ENSMUST00000145785.8	ENSMUSG00000029522.13	Pla2g1b	chr5	protein_coding	phospholipase A2, group IB, pancreas
chr5	115604379;115609000	115608841;115610052	+	115604379	115610052	cassetteExon	0.5	100	100	ENSMUST00000202822.2	ENSMUSG00000029522.13	Pla2g1b	chr5	protein_coding	phospholipase A2, group IB, pancreas
chr5	115604379;115609000	115608844;115610052	+	115604379	115610052	cassetteExon	0.5	100	100	ENSMUST00000202822.2	ENSMUSG00000029522.13	Pla2g1b	chr5	protein_coding	phospholipase A2, group IB, pancreas
chr5	115604379;115609000	115608844;115612568	+	115604379;115610179	115610052;115612568	MXE	0.5	100	100	ENSMUST00000202822.2	ENSMUSG00000029522.13	Pla2g1b	chr5	protein_coding	phospholipase A2, group IB, pancreas
chr5	115609000	115609755	+	115609000	115610052	A3SS	0.33	50	50	ENSMUST00000031495.11	ENSMUSG00000029522.13	Pla2g1b	chr5	protein_coding	phospholipase A2, group IB, pancreas
chr5	115609000	115612568	+	115609000	115609755	3pMXE	0.33	50	50	ENSMUST00000112071.8	ENSMUSG00000029522.13	Pla2g1b	chr5	protein_coding	phospholipase A2, group IB, pancreas
chr5	115621177	115622391	-	115621177	115622112	5pMXE	0.5	50	50	ENSMUST00000112067.8	ENSMUSG00000029524.17	Sirt4	chr5	protein_coding	sirtuin 4
chr5	115618584	115620634	-	115618584	115620683	A5SS	0.5	50	50	ENSMUST00000112067.8	ENSMUSG00000029524.17	Sirt4	chr5	protein_coding	sirtuin 4
chr5	115685007;115689648	115689547;115689910	+	115685007	115689910	cassetteExon	0.5	100	100	ENSMUST00000067268.15	ENSMUSG00000029528.20	Pxn	chr5	protein_coding	paxillin
chr5	115685007	115686341	+	115685007	115689910	A3SS	0.33	50	50	ENSMUST00000067268.15	ENSMUSG00000029528.20	Pxn	chr5	protein_coding	paxillin
chr5	115654544	115682402	+	115644927	115682402	A5SS	0.14	50	50	ENSMUST00000067268.15	ENSMUSG00000029528.20	Pxn	chr5	protein_coding	paxillin
chr5	115658591	115682402	+	115644927	115682402	A5SS	0.14	50	50	ENSMUST00000067268.15	ENSMUSG00000029528.20	Pxn	chr5	protein_coding	paxillin
chr5	115681120	115682402	+	115644927	115682402	A5SS	0.14	50	50	ENSMUST00000067268.15	ENSMUSG00000029528.20	Pxn	chr5	protein_coding	paxillin
chr5	115681146	115682402	+	115644927	115682402	A5SS	0.14	50	50	ENSMUST00000067268.15	ENSMUSG00000029528.20	Pxn	chr5	protein_coding	paxillin
chr5	115682059	115682402	+	115644927	115682402	A5SS	0.14	50	50	ENSMUST00000067268.15	ENSMUSG00000029528.20	Pxn	chr5	protein_coding	paxillin
chr5	115682242	115682402	+	115644927	115682402	A5SS	0.14	50	50	ENSMUST00000067268.15	ENSMUSG00000029528.20	Pxn	chr5	protein_coding	paxillin
chr5	115685007	115686341	+	115685007	115689547	A3SS	0.33	50	50	ENSMUST00000086523.7	ENSMUSG00000029528.20	Pxn	chr5	protein_coding	paxillin
chr5	115688956	115689547	+	115685007	115689547	A5SS	0.5	50	50	ENSMUST00000086523.7	ENSMUSG00000029528.20	Pxn	chr5	protein_coding	paxillin
chr5	115658591	115682402	+	115654544	115682402	A5SS	0.14	50	50	ENSMUST00000129897.8	ENSMUSG00000029528.20	Pxn	chr5	protein_coding	paxillin
chr5	115681120	115682402	+	115654544	115682402	A5SS	0.14	50	50	ENSMUST00000129897.8	ENSMUSG00000029528.20	Pxn	chr5	protein_coding	paxillin
chr5	115681146	115682402	+	115654544	115682402	A5SS	0.14	50	50	ENSMUST00000129897.8	ENSMUSG00000029528.20	Pxn	chr5	protein_coding	paxillin
chr5	115682059	115682402	+	115654544	115682402	A5SS	0.14	50	50	ENSMUST00000129897.8	ENSMUSG00000029528.20	Pxn	chr5	protein_coding	paxillin
chr5	115682242	115682402	+	115654544	115682402	A5SS	0.14	50	50	ENSMUST00000129897.8	ENSMUSG00000029528.20	Pxn	chr5	protein_coding	paxillin
chr5	115681120	115682402	+	115658591	115682402	A5SS	0.14	50	50	ENSMUST00000125007.8	ENSMUSG00000029528.20	Pxn	chr5	protein_coding	paxillin
chr5	115681146	115682402	+	115658591	115682402	A5SS	0.14	50	50	ENSMUST00000125007.8	ENSMUSG00000029528.20	Pxn	chr5	protein_coding	paxillin
chr5	115682059	115682402	+	115658591	115682402	A5SS	0.14	50	50	ENSMUST00000125007.8	ENSMUSG00000029528.20	Pxn	chr5	protein_coding	paxillin
chr5	115682242	115682402	+	115658591	115682402	A5SS	0.14	50	50	ENSMUST00000125007.8	ENSMUSG00000029528.20	Pxn	chr5	protein_coding	paxillin
chr5	115681146	115682402	+	115681120	115682402	A5SS	0.14	50	50	ENSMUST00000137716.8	ENSMUSG00000029528.20	Pxn	chr5	protein_coding	paxillin
chr5	115682059	115682402	+	115681120	115682402	A5SS	0.14	50	50	ENSMUST00000137716.8	ENSMUSG00000029528.20	Pxn	chr5	protein_coding	paxillin
chr5	115682242	115682402	+	115681120	115682402	A5SS	0.14	50	50	ENSMUST00000137716.8	ENSMUSG00000029528.20	Pxn	chr5	protein_coding	paxillin
chr5	115682059	115682402	+	115681146	115682402	A5SS	0.14	50	50	ENSMUST00000157050.8	ENSMUSG00000029528.20	Pxn	chr5	protein_coding	paxillin
chr5	115682242	115682402	+	115681146	115682402	A5SS	0.14	50	50	ENSMUST00000157050.8	ENSMUSG00000029528.20	Pxn	chr5	protein_coding	paxillin
chr5	115682242	115682402	+	115682059	115682402	A5SS	0.14	50	50	ENSMUST00000153682.8	ENSMUSG00000029528.20	Pxn	chr5	protein_coding	paxillin
chr5	115697947	115698778	+	115697947	115698800	A3SS	0.5	50	50	ENSMUST00000086519.12	ENSMUSG00000067274.11	Rplp0	chr5	protein_coding	ribosomal protein, large, P0
chr5	115723957	115725300	+	115723957	115725848	A3SS	0.5	50	50	ENSMUST00000064454.12	ENSMUSG00000041638.19	Gcn1	chr5	protein_coding	GCN1 activator of EIF2AK4
chr5	115752659	115752923	+	115752659	115752920	A3SS	0.5	50	50	ENSMUST00000064454.12	ENSMUSG00000041638.19	Gcn1	chr5	protein_coding	GCN1 activator of EIF2AK4
chr5	115743826	115744532	+	115743056	115744532	A5SS	0.5	50	50	ENSMUST00000064454.12	ENSMUSG00000041638.19	Gcn1	chr5	protein_coding	GCN1 activator of EIF2AK4
chr5	115749930	115750647	+	115749298	115750647	A5SS	0.5	50	50	ENSMUST00000064454.12	ENSMUSG00000041638.19	Gcn1	chr5	protein_coding	GCN1 activator of EIF2AK4
chr5	115775825	115778143	+	115775825	115778139	A3SS	0.5	50	50	ENSMUST00000031492.15	ENSMUSG00000029518.16	Rab35	chr5	protein_coding	RAB35, member RAS oncogene family
chr5	115787628;115789323	115789215;115789878	-	115787628	115789878	cassetteExon	0.5	100	100	ENSMUST00000055408.13	ENSMUSG00000041609.17	Bicdl1	chr5	protein_coding	BICD family like cargo adaptor 1
chr5	115794090;115799577	115799434;115800759	-	115794090	115800759	cassetteExon	0.5	100	100	ENSMUST00000055408.13	ENSMUSG00000041609.17	Bicdl1	chr5	protein_coding	BICD family like cargo adaptor 1
chr5	115808359;115810214	115810203;115811139	-	115808359	115811139	cassetteExon	0.5	100	100	ENSMUST00000055408.13	ENSMUSG00000041609.17	Bicdl1	chr5	protein_coding	BICD family like cargo adaptor 1
chr5	115805670	115808213	-	115801945	115808213	A3SS	0.5	50	50	ENSMUST00000055408.13	ENSMUSG00000041609.17	Bicdl1	chr5	protein_coding	BICD family like cargo adaptor 1
chr5	115789998	115790686	-	115789998	115793960	A5SS	0.33	50	50	ENSMUST00000055408.13	ENSMUSG00000041609.17	Bicdl1	chr5	protein_coding	BICD family like cargo adaptor 1
chr5	115789998	115790984	-	115789998	115793960	A5SS	0.33	50	50	ENSMUST00000055408.13	ENSMUSG00000041609.17	Bicdl1	chr5	protein_coding	BICD family like cargo adaptor 1
chr5	115811255	115853455	-	115811255	115862600	A5SS	0.5	50	50	ENSMUST00000055408.13	ENSMUSG00000041609.17	Bicdl1	chr5	protein_coding	BICD family like cargo adaptor 1
chr5	115789998	115790984	-	115789998	115790686	A5SS	0.33	50	50	ENSMUST00000118576.8	ENSMUSG00000041609.17	Bicdl1	chr5	protein_coding	BICD family like cargo adaptor 1
chr5	115794090	115800759	-	115799577	115800759	3pMXE	0.5	50	50	ENSMUST00000148627.2	ENSMUSG00000041609.17	Bicdl1	chr5	protein_coding	BICD family like cargo adaptor 1
chr5	115989352	115992600	+	115989352	115997257	A3SS	0.5	50	50	ENSMUST00000147330.8	ENSMUSG00000029516.20	Cit	chr5	protein_coding	citron
chr5	115983360	115984406	+	115983382	115984406	A5SS	0.5	50	50	ENSMUST00000147330.8	ENSMUSG00000029516.20	Cit	chr5	protein_coding	citron
chr5	116045893	116046697	+	116024866	116046697	A5SS	0.5	50	50	ENSMUST00000147330.8	ENSMUSG00000029516.20	Cit	chr5	protein_coding	citron
chr5	115983360	115984343	+	115983360	115984406	A3SS	0.5	50	50	ENSMUST00000137952.8	ENSMUSG00000029516.20	Cit	chr5	protein_coding	citron
chr5	116074928;116076863	116076738;116079896	+	116074928	116079896	cassetteExon	0.5	100	100	ENSMUST00000141101.5	ENSMUSG00000029516.20	Cit	chr5	protein_coding	citron
chr5	116106144;116106851	116106565;116107023	+	116106144	116107023	cassetteExon	0.5	100	100	ENSMUST00000141101.5	ENSMUSG00000029516.20	Cit	chr5	protein_coding	citron
chr5	116125122;116125791	116125747;116126215	+	116125122	116126215	cassetteExon	0.5	100	100	ENSMUST00000141101.5	ENSMUSG00000029516.20	Cit	chr5	protein_coding	citron
chr5	116117928	116119709	+	116117928	116119754	A3SS	0.5	50	50	ENSMUST00000141101.5	ENSMUSG00000029516.20	Cit	chr5	protein_coding	citron
chr5	116135912	116143844	+	116135912	116143841	A3SS	0.5	50	50	ENSMUST00000141101.5	ENSMUSG00000029516.20	Cit	chr5	protein_coding	citron
chr5	116064350	116064518	+	116063558	116064518	A5SS	0.5	50	50	ENSMUST00000141101.5	ENSMUSG00000029516.20	Cit	chr5	protein_coding	citron
chr5	116071714	116071880	+	116071627	116071880	A5SS	0.5	50	50	ENSMUST00000141101.5	ENSMUSG00000029516.20	Cit	chr5	protein_coding	citron
chr5	116083530	116083844	+	116079991	116083844	A5SS	0.5	50	50	ENSMUST00000141101.5	ENSMUSG00000029516.20	Cit	chr5	protein_coding	citron
chr5	116089237	116090511	+	116086140	116090511	A5SS	0.5	50	50	ENSMUST00000141101.5	ENSMUSG00000029516.20	Cit	chr5	protein_coding	citron
chr5	116156140	116158433	-	116156140;116158177	116158063;116158433	ES	0.5	50	50	ENSMUST00000031486.14	ENSMUSG00000029513.15	Prkab1	chr5	protein_coding	protein kinase, AMP-activated, beta 1 non-catalytic subunit
chr5	116156140	116158433	-	116158177	116158433	3pMXE	0.5	50	50	ENSMUST00000141018.2	ENSMUSG00000029513.15	Prkab1	chr5	protein_coding	protein kinase, AMP-activated, beta 1 non-catalytic subunit
chr5	116165174	116166406	-	116165174	116167037	A5SS	0.5	50	50	ENSMUST00000144932.2	ENSMUSG00000084992.2	Gm13842	chr5	lncRNA	predicted gene 13842
chr5	116308464	116310501	-	116301632	116310501	A3SS	0.5	50	50	ENSMUST00000050178.13	ENSMUSG00000043913.15	Ccdc60	chr5	protein_coding	coiled-coil domain containing 60
chr5	116553529	116553818	-	116553529	116560172	A5SS	0.5	50	50	ENSMUST00000036991.5	ENSMUSG00000041548.5	Hspb8	chr5	protein_coding	heat shock protein 8
chr5	116591772;116592747	116592732;116605491	-	116591772	116605491	cassetteExon	0.5	100	100	ENSMUST00000076124.7	ENSMUSG00000063919.12	Srrm4	chr5	protein_coding	serine/arginine repetitive matrix 4
chr5	116956563	116968550	-	116882840	116968550	A3SS	0.5	50	50	ENSMUST00000202259.2	ENSMUSG00000106909.2	Gm43122	chr5	lncRNA	predicted gene 43122
chr5	117355305	117365938	+	117355305;117363472	117363305;117365938	ES	0.5	50	50	ENSMUST00000111978.8	ENSMUSG00000061288.14	Taok3	chr5	protein_coding	TAO kinase 3
chr5	117264568	117323592	+	117258404	117323592	A5SS	0.33	50	50	ENSMUST00000111978.8	ENSMUSG00000061288.14	Taok3	chr5	protein_coding	TAO kinase 3
chr5	117271840	117323592	+	117258404	117323592	A5SS	0.33	50	50	ENSMUST00000111978.8	ENSMUSG00000061288.14	Taok3	chr5	protein_coding	TAO kinase 3
chr5	117271840	117331694	+	117323676	117331694	A5SS&ES	0.5	50	50	ENSMUST00000111978.8	ENSMUSG00000061288.14	Taok3	chr5	protein_coding	TAO kinase 3
chr5	117344591	117344712	+	117342460	117344712	A5SS	0.5	50	50	ENSMUST00000111978.8	ENSMUSG00000061288.14	Taok3	chr5	protein_coding	TAO kinase 3
chr5	117271840	117323592	+	117264568	117323592	A5SS	0.33	50	50	ENSMUST00000125738.8	ENSMUSG00000061288.14	Taok3	chr5	protein_coding	TAO kinase 3
chr5	117271840	117331694	+	117271840;117323676	117323592;117331694	ES	0.5	50	50	ENSMUST00000128720.8	ENSMUSG00000061288.14	Taok3	chr5	protein_coding	TAO kinase 3
chr5	117271840	117331694	+	117271840	117323592	3pMXE	0.5	50	50	ENSMUST00000153709.2	ENSMUSG00000061288.14	Taok3	chr5	protein_coding	TAO kinase 3
chr5	117421530;117422194	117422129;117423786	-	117421530	117423786	cassetteExon	0.5	100	100	ENSMUST00000036951.13	ENSMUSG00000032959.13	Pebp1	chr5	protein_coding	phosphatidylethanolamine binding protein 1
chr5	117421530;117422739	117422591;117423786	-	117421530	117423786	cassetteExon	0.5	100	100	ENSMUST00000036951.13	ENSMUSG00000032959.13	Pebp1	chr5	protein_coding	phosphatidylethanolamine binding protein 1
chr5	117421530;117422739	117422591;117423786	-	117421530;117422194	117422129;117423786	MXE	0.5	100	100	ENSMUST00000111973.8	ENSMUSG00000032959.13	Pebp1	chr5	protein_coding	phosphatidylethanolamine binding protein 1
chr5	117457568	117462918	+	117457568;117461645	117461565;117462918	ES	0.33	50	50	ENSMUST00000111967.8	ENSMUSG00000066894.15	Vsig10	chr5	protein_coding	V-set and immunoglobulin domain containing 10
chr5	117461955	117462918	+	117461645	117462918	A5SS	0.33	50	50	ENSMUST00000111967.8	ENSMUSG00000066894.15	Vsig10	chr5	protein_coding	V-set and immunoglobulin domain containing 10
chr5	117473107	117476272	+	117473132	117476272	A5SS	0.5	50	50	ENSMUST00000111967.8	ENSMUSG00000066894.15	Vsig10	chr5	protein_coding	V-set and immunoglobulin domain containing 10
chr5	117488145	117489630	+	117487964	117489630	A5SS	0.5	50	50	ENSMUST00000111967.8	ENSMUSG00000066894.15	Vsig10	chr5	protein_coding	V-set and immunoglobulin domain containing 10
chr5	117457568;117461955	117461565;117462918	+	117457568	117462918	cassetteExon	0.5	100	100	ENSMUST00000086464.8	ENSMUSG00000066894.15	Vsig10	chr5	protein_coding	V-set and immunoglobulin domain containing 10
chr5	117457568	117462918	+	117461955	117462918	5pMXE	0.33	50	50	ENSMUST00000147182.5	ENSMUSG00000066894.15	Vsig10	chr5	protein_coding	V-set and immunoglobulin domain containing 10
chr5	117499270	117501656	+	117495538	117501656	A5SS	0.5	50	50	ENSMUST00000031309.16	ENSMUSG00000029364.16	Wsb2	chr5	protein_coding	WD repeat and SOCS box-containing 2
chr5	117517971	117518084	-	117517971	117518832	A5SS	0.5	50	50	ENSMUST00000086461.13	ENSMUSG00000029363.15	Rfc5	chr5	protein_coding	replication factor C (activator 1) 5
chr5	117527419	117528219	+	117527350	117528219	A5SS	0.5	50	50	ENSMUST00000140833.2	ENSMUSG00000086075.2	Gm15728	chr5	lncRNA	predicted gene 15728
chr5	117980342	118004904	+	117919213	118004904	A5SS	0.33	50	50	ENSMUST00000138579.3	ENSMUSG00000029361.19	Nos1	chr5	protein_coding	nitric oxide synthase 1, neuronal
chr5	118002253	118004904	+	117919213	118004904	A5SS	0.33	50	50	ENSMUST00000138579.3	ENSMUSG00000029361.19	Nos1	chr5	protein_coding	nitric oxide synthase 1, neuronal
chr5	117980342	118004904	+	118002253	118004904	A5SS&ES	0.33	50	50	ENSMUST00000124194.2	ENSMUSG00000029361.19	Nos1	chr5	protein_coding	nitric oxide synthase 1, neuronal
chr5	118052507;118053713	118053612;118057461	+	118052507	118057461	cassetteExon	0.5	100	100	ENSMUST00000142742.9	ENSMUSG00000029361.19	Nos1	chr5	protein_coding	nitric oxide synthase 1, neuronal
chr5	118091237	118091863	+	118090948	118091863	A5SS	0.5	50	50	ENSMUST00000142742.9	ENSMUSG00000029361.19	Nos1	chr5	protein_coding	nitric oxide synthase 1, neuronal
chr5	118129004	118133435	+	118129004;118132726	118132547;118133435	ES	0.5	50	50	ENSMUST00000202447.4	ENSMUSG00000032898.10	Fbxo21	chr5	protein_coding	F-box protein 21
chr5	118133567	118138403	+	118133567	118138382	A3SS	0.5	50	50	ENSMUST00000202447.4	ENSMUSG00000032898.10	Fbxo21	chr5	protein_coding	F-box protein 21
chr5	118115412	118115923	+	118115104	118115923	A5SS	0.5	50	50	ENSMUST00000202447.4	ENSMUSG00000032898.10	Fbxo21	chr5	protein_coding	F-box protein 21
chr5	118117588	118117806	+	118116058	118117806	A5SS	0.5	50	50	ENSMUST00000202447.4	ENSMUSG00000032898.10	Fbxo21	chr5	protein_coding	F-box protein 21
chr5	118174194	118184380	+	118166052	118184380	A5SS	0.25	50	50	ENSMUST00000031304.14	ENSMUSG00000029359.14	Tesc	chr5	protein_coding	tescalcin
chr5	118179598	118184380	+	118166052	118184380	A5SS	0.25	50	50	ENSMUST00000031304.14	ENSMUSG00000029359.14	Tesc	chr5	protein_coding	tescalcin
chr5	118183219	118184380	+	118166052	118184380	A5SS	0.25	50	50	ENSMUST00000031304.14	ENSMUSG00000029359.14	Tesc	chr5	protein_coding	tescalcin
chr5	118194508	118194602	+	118194503	118194602	A5SS	0.5	50	50	ENSMUST00000031304.14	ENSMUSG00000029359.14	Tesc	chr5	protein_coding	tescalcin
chr5	118179598	118184380	+	118174194	118184380	A5SS	0.25	50	50	ENSMUST00000151792.8	ENSMUSG00000029359.14	Tesc	chr5	protein_coding	tescalcin
chr5	118183219	118184380	+	118174194	118184380	A5SS	0.25	50	50	ENSMUST00000151792.8	ENSMUSG00000029359.14	Tesc	chr5	protein_coding	tescalcin
chr5	118179598;118183219	118183075;118184380	+	118179598	118184380	cassetteExon	0.5	100	100	ENSMUST00000148777.2	ENSMUSG00000029359.14	Tesc	chr5	protein_coding	tescalcin
chr5	118308193	118322543	+	118303007	118322543	A5SS	0.5	50	50	ENSMUST00000184679.2	ENSMUSG00000046607.7	Hrk	chr5	protein_coding	harakiri, BCL2 interacting protein (contains only BH3 domain)
chr5	118382045	118383037	-	118382045	118382895	5pMXE	0.5	50	50	ENSMUST00000117177.8	ENSMUSG00000032850.17	Rnft2	chr5	protein_coding	ring finger protein, transmembrane 2
chr5	118332731	118339213	-	118331731	118339213	A3SS	0.5	50	50	ENSMUST00000117177.8	ENSMUSG00000032850.17	Rnft2	chr5	protein_coding	ring finger protein, transmembrane 2
chr5	118375661	118380523	-	118375664	118380523	A3SS	0.5	50	50	ENSMUST00000117177.8	ENSMUSG00000032850.17	Rnft2	chr5	protein_coding	ring finger protein, transmembrane 2
chr5	118382045	118383037	-	118381096	118383037	A3SS	0.5	50	50	ENSMUST00000121369.8	ENSMUSG00000032850.17	Rnft2	chr5	protein_coding	ring finger protein, transmembrane 2
chr5	118699876	118731398	+	118698922	118731398	A5SS	0.5	50	50	ENSMUST00000201614.2	ENSMUSG00000018076.13	Med13l	chr5	protein_coding	mediator complex subunit 13-like
chr5	118889819	118889905	+	118889819	118889932	A3SS	0.5	50	50	ENSMUST00000100816.8	ENSMUSG00000018076.13	Med13l	chr5	protein_coding	mediator complex subunit 13-like
chr5	119708779	119709518	-	119708793	119709518	A3SS	0.5	50	50	ENSMUST00000201466.4	ENSMUSG00000087516.8	Tbx3os1	chr5	lncRNA	T-box 3, opposite strand 1
chr5	119756021	119765347	-	119718421	119765347	A3SS	0.5	50	50	ENSMUST00000202307.2	ENSMUSG00000087516.8	Tbx3os1	chr5	lncRNA	T-box 3, opposite strand 1
chr5	119756021	119778059	-	119756021	119765347	5pMXE	0.5	50	50	ENSMUST00000134493.8	ENSMUSG00000087516.8	Tbx3os1	chr5	lncRNA	T-box 3, opposite strand 1
chr5	119812358;119813367	119813308;119813623	+	119812358	119813623	cassetteExon	0.5	100	100	ENSMUST00000079719.11	ENSMUSG00000018604.19	Tbx3	chr5	protein_coding	T-box 3
chr5	119818360	119818460	+	119816897	119818460	A5SS	0.5	50	50	ENSMUST00000079719.11	ENSMUSG00000018604.19	Tbx3	chr5	protein_coding	T-box 3
chr5	119943677	119945653	-	119943677	119945750	A5SS	0.5	50	50	ENSMUST00000202665.2	ENSMUSG00000107053.2	1700021F13Rik	chr5	lncRNA	RIKEN cDNA 1700021F13 gene
chr5	119967384;119969692	119969603;119969804	-	119967384	119969804	cassetteExon	0.5	100	100	ENSMUST00000201062.3	ENSMUSG00000106795.4	Gm43050	chr5	lncRNA	predicted gene 43050
chr5	119967384	119969804	-	119969692	119969804	3pMXE	0.5	50	50	ENSMUST00000201152.3	ENSMUSG00000106795.4	Gm43050	chr5	lncRNA	predicted gene 43050
chr5	119973342	119974941	+	119970989	119974941	A5SS	0.5	50	50	ENSMUST00000202723.4	ENSMUSG00000018263.12	Tbx5	chr5	protein_coding	T-box 5
chr5	120294954	120313924	+	120282178	120313924	A5SS	0.14	50	50	ENSMUST00000031590.12	ENSMUSG00000029594.13	Rbm19	chr5	protein_coding	RNA binding motif protein 19
chr5	120300854	120313924	+	120282178	120313924	A5SS	0.14	50	50	ENSMUST00000031590.12	ENSMUSG00000029594.13	Rbm19	chr5	protein_coding	RNA binding motif protein 19
chr5	120308173	120313924	+	120282178	120313924	A5SS	0.14	50	50	ENSMUST00000031590.12	ENSMUSG00000029594.13	Rbm19	chr5	protein_coding	RNA binding motif protein 19
chr5	120308605	120313924	+	120282178	120313924	A5SS	0.14	50	50	ENSMUST00000031590.12	ENSMUSG00000029594.13	Rbm19	chr5	protein_coding	RNA binding motif protein 19
chr5	120311219	120313924	+	120282178	120313924	A5SS	0.14	50	50	ENSMUST00000031590.12	ENSMUSG00000029594.13	Rbm19	chr5	protein_coding	RNA binding motif protein 19
chr5	120313834	120313924	+	120282178	120313924	A5SS	0.14	50	50	ENSMUST00000031590.12	ENSMUSG00000029594.13	Rbm19	chr5	protein_coding	RNA binding motif protein 19
chr5	120313976	120324283	+	120314029	120324283	A5SS	0.5	50	50	ENSMUST00000031590.12	ENSMUSG00000029594.13	Rbm19	chr5	protein_coding	RNA binding motif protein 19
chr5	120300854	120313924	+	120294954	120313924	A5SS	0.14	50	50	ENSMUST00000200841.4	ENSMUSG00000029594.13	Rbm19	chr5	protein_coding	RNA binding motif protein 19
chr5	120308173	120313924	+	120294954	120313924	A5SS	0.14	50	50	ENSMUST00000200841.4	ENSMUSG00000029594.13	Rbm19	chr5	protein_coding	RNA binding motif protein 19
chr5	120308605	120313924	+	120294954	120313924	A5SS	0.14	50	50	ENSMUST00000200841.4	ENSMUSG00000029594.13	Rbm19	chr5	protein_coding	RNA binding motif protein 19
chr5	120311219	120313924	+	120294954	120313924	A5SS	0.14	50	50	ENSMUST00000200841.4	ENSMUSG00000029594.13	Rbm19	chr5	protein_coding	RNA binding motif protein 19
chr5	120313834	120313924	+	120294954	120313924	A5SS	0.14	50	50	ENSMUST00000200841.4	ENSMUSG00000029594.13	Rbm19	chr5	protein_coding	RNA binding motif protein 19
chr5	120308173	120313924	+	120300854	120313924	A5SS	0.14	50	50	ENSMUST00000201105.4	ENSMUSG00000029594.13	Rbm19	chr5	protein_coding	RNA binding motif protein 19
chr5	120308605	120313924	+	120300854	120313924	A5SS	0.14	50	50	ENSMUST00000201105.4	ENSMUSG00000029594.13	Rbm19	chr5	protein_coding	RNA binding motif protein 19
chr5	120311219	120313924	+	120300854	120313924	A5SS	0.14	50	50	ENSMUST00000201105.4	ENSMUSG00000029594.13	Rbm19	chr5	protein_coding	RNA binding motif protein 19
chr5	120313834	120313924	+	120300854	120313924	A5SS	0.14	50	50	ENSMUST00000201105.4	ENSMUSG00000029594.13	Rbm19	chr5	protein_coding	RNA binding motif protein 19
chr5	120308605	120313924	+	120308173	120313924	A5SS	0.25	50	50	ENSMUST00000202213.4	ENSMUSG00000029594.13	Rbm19	chr5	protein_coding	RNA binding motif protein 19
chr5	120311219	120313924	+	120308173	120313924	A5SS	0.25	50	50	ENSMUST00000202213.4	ENSMUSG00000029594.13	Rbm19	chr5	protein_coding	RNA binding motif protein 19
chr5	120313834	120313924	+	120308173	120313924	A5SS	0.25	50	50	ENSMUST00000202213.4	ENSMUSG00000029594.13	Rbm19	chr5	protein_coding	RNA binding motif protein 19
chr5	120311219	120313924	+	120308605	120313924	A5SS	0.14	50	50	ENSMUST00000201075.4	ENSMUSG00000029594.13	Rbm19	chr5	protein_coding	RNA binding motif protein 19
chr5	120313834	120313924	+	120308605	120313924	A5SS	0.14	50	50	ENSMUST00000201075.4	ENSMUSG00000029594.13	Rbm19	chr5	protein_coding	RNA binding motif protein 19
chr5	120313834	120313924	+	120311219	120313924	A5SS	0.14	50	50	ENSMUST00000201792.4	ENSMUSG00000029594.13	Rbm19	chr5	protein_coding	RNA binding motif protein 19
chr5	120273645	120277156	-	120263768	120277156	A3SS	0.5	50	50	ENSMUST00000180812.3	ENSMUSG00000097368.3	Gm10390	chr5	lncRNA	predicted gene 10390
chr5	120477875	120480434	-	120477875	120483897	A5SS	0.5	50	50	ENSMUST00000201741.2	ENSMUSG00000107141.2	Gm42654	chr5	lncRNA	predicted gene 42654
chr5	120601290	120605339	-	120601290	120610786	A5SS	0.33	50	50	ENSMUST00000052258.14	ENSMUSG00000029596.14	Sdsl	chr5	protein_coding	serine dehydratase-like
chr5	120601290	120605370	-	120601290	120610786	A5SS	0.33	50	50	ENSMUST00000052258.14	ENSMUSG00000029596.14	Sdsl	chr5	protein_coding	serine dehydratase-like
chr5	120601290	120605370	-	120601290	120605339	A5SS	0.33	50	50	ENSMUST00000031594.13	ENSMUSG00000029596.14	Sdsl	chr5	protein_coding	serine dehydratase-like
chr5	120614662	120617144	+	120614662;120616129	120616054;120617144	ES	0.5	50	50	ENSMUST00000201684.4	ENSMUSG00000029597.15	Sds	chr5	protein_coding	serine dehydratase
chr5	120658951	120659819	+	120658951;120659200	120659033;120659819	ES	0.5	50	50	ENSMUST00000068326.14	ENSMUSG00000032754.15	Slc8b1	chr5	protein_coding	solute carrier family 8 (sodium/lithium/calcium exchanger), member B1
chr5	120657983	120658839	+	120657983	120658668	A3SS&ES	0.5	50	50	ENSMUST00000068326.14	ENSMUSG00000032754.15	Slc8b1	chr5	protein_coding	solute carrier family 8 (sodium/lithium/calcium exchanger), member B1
chr5	120649504	120651185	+	120649348	120651185	A5SS	0.33	50	50	ENSMUST00000068326.14	ENSMUSG00000032754.15	Slc8b1	chr5	protein_coding	solute carrier family 8 (sodium/lithium/calcium exchanger), member B1
chr5	120650975	120651185	+	120649348	120651185	A5SS	0.33	50	50	ENSMUST00000068326.14	ENSMUSG00000032754.15	Slc8b1	chr5	protein_coding	solute carrier family 8 (sodium/lithium/calcium exchanger), member B1
chr5	120667728	120668381	+	120667728	120670925	A3SS	0.5	50	50	ENSMUST00000076051.12	ENSMUSG00000032754.15	Slc8b1	chr5	protein_coding	solute carrier family 8 (sodium/lithium/calcium exchanger), member B1
chr5	120669213	120670925	+	120667728	120670925	A5SS	0.5	50	50	ENSMUST00000076051.12	ENSMUSG00000032754.15	Slc8b1	chr5	protein_coding	solute carrier family 8 (sodium/lithium/calcium exchanger), member B1
chr5	120650975	120651185	+	120649504	120651185	A5SS	0.33	50	50	ENSMUST00000147496.2	ENSMUSG00000032754.15	Slc8b1	chr5	protein_coding	solute carrier family 8 (sodium/lithium/calcium exchanger), member B1
chr5	120740624	120743194	+	120740525	120743194	A5SS	0.5	50	50	ENSMUST00000069259.9	ENSMUSG00000029601.14	Iqcd	chr5	protein_coding	IQ motif containing D
chr5	120749794;120750139	120750045;120750339	-	120749794	120750339	cassetteExon	0.5	100	100	ENSMUST00000111884.8	ENSMUSG00000029600.11	Rita1	chr5	protein_coding	RBPJ interacting and tubulin associated 1
chr5	120742312	120749443	-	120732684	120749443	A3SS	0.25	50	50	ENSMUST00000111884.8	ENSMUSG00000029600.11	Rita1	chr5	protein_coding	RBPJ interacting and tubulin associated 1
chr5	120745308	120749443	-	120732684	120749443	A3SS	0.25	50	50	ENSMUST00000111884.8	ENSMUSG00000029600.11	Rita1	chr5	protein_coding	RBPJ interacting and tubulin associated 1
chr5	120748027	120749443	-	120732684	120749443	A3SS	0.25	50	50	ENSMUST00000111884.8	ENSMUSG00000029600.11	Rita1	chr5	protein_coding	RBPJ interacting and tubulin associated 1
chr5	120745308	120749443	-	120742312	120749443	A3SS	0.33	50	50	ENSMUST00000156356.2	ENSMUSG00000029600.11	Rita1	chr5	protein_coding	RBPJ interacting and tubulin associated 1
chr5	120748027	120749443	-	120742312	120749443	A3SS	0.33	50	50	ENSMUST00000156356.2	ENSMUSG00000029600.11	Rita1	chr5	protein_coding	RBPJ interacting and tubulin associated 1
chr5	120742312	120743584	-	120742312	120749443	A5SS	0.5	50	50	ENSMUST00000156356.2	ENSMUSG00000029600.11	Rita1	chr5	protein_coding	RBPJ interacting and tubulin associated 1
chr5	120748027	120749443	-	120745308	120749443	A3SS	0.25	50	50	ENSMUST00000136070.8	ENSMUSG00000029600.11	Rita1	chr5	protein_coding	RBPJ interacting and tubulin associated 1
chr5	120786975	120787381	+	120786975	120787453	A3SS	0.5	50	50	ENSMUST00000125804.8	ENSMUSG00000029602.12	Rasal1	chr5	protein_coding	RAS protein activator like 1 (GAP1 like)
chr5	120791572	120792871	+	120790935	120792871	A5SS	0.5	50	50	ENSMUST00000125804.8	ENSMUSG00000029602.12	Rasal1	chr5	protein_coding	RAS protein activator like 1 (GAP1 like)
chr5	120820530	120820633	-	120820530	120820645	A5SS	0.5	50	50	ENSMUST00000031607.7	ENSMUSG00000029603.16	Dtx1	chr5	protein_coding	deltex 1, E3 ubiquitin ligase
chr5	120833177	120843807	-	120833177	120848120	A5SS	0.5	50	50	ENSMUST00000031607.7	ENSMUSG00000029603.16	Dtx1	chr5	protein_coding	deltex 1, E3 ubiquitin ligase
chr5	120870023;120871294	120871202;120871479	-	120870023	120871479	cassetteExon	0.5	100	100	ENSMUST00000053909.13	ENSMUSG00000032690.17	Oas2	chr5	protein_coding	2'-5' oligoadenylate synthetase 2
chr5	120930044	120933381	-	120930044;120932458	120932170;120933381	ES	0.5	50	50	ENSMUST00000100785.7	ENSMUSG00000066867.9	Oas1e	chr5	protein_coding	2'-5' oligoadenylate synthetase 1E
chr5	120924780	120926011	-	120925003	120926011	A3SS	0.5	50	50	ENSMUST00000100785.7	ENSMUSG00000066867.9	Oas1e	chr5	protein_coding	2'-5' oligoadenylate synthetase 1E
chr5	120943665;120944470	120944361;120950499	-	120943665;120947109	120946025;120950499	MXE	0.5	100	100	ENSMUST00000117193.8	ENSMUSG00000001166.18	Oas1c	chr5	protein_coding	2'-5' oligoadenylate synthetase 1C
chr5	120947109	120950499	-	120944470	120950499	A3SS	0.5	50	50	ENSMUST00000125547.2	ENSMUSG00000001166.18	Oas1c	chr5	protein_coding	2'-5' oligoadenylate synthetase 1C
chr5	120943665	120946025	-	120943665	120944361	A5SS&ES	0.5	50	50	ENSMUST00000125547.2	ENSMUSG00000001166.18	Oas1c	chr5	protein_coding	2'-5' oligoadenylate synthetase 1C
chr5	120950945	120952491	+	120950945;120951427	120951276;120952491	ES	0.5	50	50	ENSMUST00000182725.2	ENSMUSG00000029605.17	Oas1b	chr5	polymorphic_pseudogene	2'-5' oligoadenylate synthetase 1B
chr5	120986520	120993459	+	120986520;120989731	120989535;120993459	ES	0.5	50	50	ENSMUST00000057814.5	ENSMUSG00000053765.5	Oas1f	chr5	protein_coding	2'-5' oligoadenylate synthetase 1F
chr5	121005243	121008982	+	121005243	121010980	A3SS	0.5	50	50	ENSMUST00000171820.3	ENSMUSG00000001168.17	Oas1h	chr5	protein_coding	2'-5' oligoadenylate synthetase 1H
chr5	121010006	121010980	+	121005243	121010980	A5SS	0.5	50	50	ENSMUST00000171820.3	ENSMUSG00000001168.17	Oas1h	chr5	protein_coding	2'-5' oligoadenylate synthetase 1H
chr5	121017395	121019887	-	121017395	121019948	A5SS	0.5	50	50	ENSMUST00000086368.12	ENSMUSG00000066861.15	Oas1g	chr5	protein_coding	2'-5' oligoadenylate synthetase 1G
chr5	121147162	121147897	-	121147162	121147301	5pMXE	0.5	50	50	ENSMUST00000079204.9	ENSMUSG00000029608.11	Rph3a	chr5	protein_coding	rabphilin 3A
chr5	121124576	121146376	-	121124576	121147047	A5SS	0.5	50	50	ENSMUST00000079204.9	ENSMUSG00000029608.11	Rph3a	chr5	protein_coding	rabphilin 3A
chr5	121147162;121147508	121147301;121147897	-	121147162	121147897	cassetteExon	0.5	100	100	ENSMUST00000202406.4	ENSMUSG00000029608.11	Rph3a	chr5	protein_coding	rabphilin 3A
chr5	121282759	121287166	-	121282747	121287166	A3SS	0.5	50	50	ENSMUST00000100770.9	ENSMUSG00000043733.15	Ptpn11	chr5	protein_coding	protein tyrosine phosphatase, non-receptor type 11
chr5	121345258	121346473	+	121345258	121346454	A3SS	0.5	50	50	ENSMUST00000031617.13	ENSMUSG00000029614.14	Rpl6	chr5	protein_coding	ribosomal protein L6
chr5	121437706	121439805	+	121437706	121439832	A3SS	0.5	50	50	ENSMUST00000042614.13	ENSMUSG00000042744.17	Hectd4	chr5	protein_coding	HECT domain E3 ubiquitin protein ligase 4
chr5	121460419	121460811	+	121460419	121460699	A3SS	0.5	50	50	ENSMUST00000042614.13	ENSMUSG00000042744.17	Hectd4	chr5	protein_coding	HECT domain E3 ubiquitin protein ligase 4
chr5	121462096	121462746	+	121462096	121463254	A3SS	0.5	50	50	ENSMUST00000042614.13	ENSMUSG00000042744.17	Hectd4	chr5	protein_coding	HECT domain E3 ubiquitin protein ligase 4
chr5	121430921	121433438	+	121430915	121433438	A5SS	0.5	50	50	ENSMUST00000042614.13	ENSMUSG00000042744.17	Hectd4	chr5	protein_coding	HECT domain E3 ubiquitin protein ligase 4
chr5	121454021	121455265	+	121453569	121455265	A5SS	0.5	50	50	ENSMUST00000042614.13	ENSMUSG00000042744.17	Hectd4	chr5	protein_coding	HECT domain E3 ubiquitin protein ligase 4
chr5	121510738	121511213	-	121510738	121511201	A5SS	0.33	50	50	ENSMUST00000156158.6	ENSMUSG00000042726.15	Trafd1	chr5	protein_coding	TRAF type zinc finger domain containing 1
chr5	121510738	121511402	-	121510738	121511201	A5SS	0.33	50	50	ENSMUST00000156158.6	ENSMUSG00000042726.15	Trafd1	chr5	protein_coding	TRAF type zinc finger domain containing 1
chr5	121522167;121522908	121522808;121523588	-	121522167	121523588	cassetteExon	0.5	100	100	ENSMUST00000042312.14	ENSMUSG00000042726.15	Trafd1	chr5	protein_coding	TRAF type zinc finger domain containing 1
chr5	121522167;121522908	121522820;121523588	-	121522167	121523588	cassetteExon	0.5	100	100	ENSMUST00000042312.14	ENSMUSG00000042726.15	Trafd1	chr5	protein_coding	TRAF type zinc finger domain containing 1
chr5	121522167	121523372	-	121522167	121523588	A5SS	0.25	50	50	ENSMUST00000042312.14	ENSMUSG00000042726.15	Trafd1	chr5	protein_coding	TRAF type zinc finger domain containing 1
chr5	121510738	121511402	-	121510738	121511213	A5SS	0.33	50	50	ENSMUST00000120784.8	ENSMUSG00000042726.15	Trafd1	chr5	protein_coding	TRAF type zinc finger domain containing 1
chr5	121522167	121522808	-	121522167	121523372	A5SS	0.25	50	50	ENSMUST00000152265.8	ENSMUSG00000042726.15	Trafd1	chr5	protein_coding	TRAF type zinc finger domain containing 1
chr5	121522167	121522820	-	121522167	121523372	A5SS	0.25	50	50	ENSMUST00000152265.8	ENSMUSG00000042726.15	Trafd1	chr5	protein_coding	TRAF type zinc finger domain containing 1
chr5	121522167	121522820	-	121522167	121522808	A5SS	0.25	50	50	ENSMUST00000155379.8	ENSMUSG00000042726.15	Trafd1	chr5	protein_coding	TRAF type zinc finger domain containing 1
chr5	121536125	121546260	+	121536125;121545341	121545256;121546260	ES	0.5	50	50	ENSMUST00000042163.15	ENSMUSG00000042719.18	Naa25	chr5	protein_coding	N(alpha)-acetyltransferase 25, NatB auxiliary subunit
chr5	121546398	121551070	+	121546398;121547267	121547149;121551070	ES	0.5	50	50	ENSMUST00000042163.15	ENSMUSG00000042719.18	Naa25	chr5	protein_coding	N(alpha)-acetyltransferase 25, NatB auxiliary subunit
chr5	121564889;121567524	121567396;121568668	+	121564889	121568668	cassetteExon	0.5	100	100	ENSMUST00000042163.15	ENSMUSG00000042719.18	Naa25	chr5	protein_coding	N(alpha)-acetyltransferase 25, NatB auxiliary subunit
chr5	121583635	121590254	-	121571155	121590254	A3SS	0.25	50	50	ENSMUST00000153758.2	ENSMUSG00000029616.10	Erp29	chr5	protein_coding	endoplasmic reticulum protein 29
chr5	121585342	121590254	-	121571155	121590254	A3SS	0.25	50	50	ENSMUST00000153758.2	ENSMUSG00000029616.10	Erp29	chr5	protein_coding	endoplasmic reticulum protein 29
chr5	121587226	121590254	-	121571155	121590254	A3SS	0.25	50	50	ENSMUST00000153758.2	ENSMUSG00000029616.10	Erp29	chr5	protein_coding	endoplasmic reticulum protein 29
chr5	121583635	121590254	-	121583635;121585342	121585204;121590254	ES	0.33	50	50	ENSMUST00000130451.2	ENSMUSG00000029616.10	Erp29	chr5	protein_coding	endoplasmic reticulum protein 29
chr5	121585342;121587226	121587108;121590254	-	121585342	121590254	cassetteExon	0.5	100	100	ENSMUST00000130451.2	ENSMUSG00000029616.10	Erp29	chr5	protein_coding	endoplasmic reticulum protein 29
chr5	121587226	121590254	-	121583635	121590254	A3SS	0.25	50	50	ENSMUST00000052590.8	ENSMUSG00000029616.10	Erp29	chr5	protein_coding	endoplasmic reticulum protein 29
chr5	121601896	121605917	+	121601896;121602925	121602862;121605917	ES	0.5	50	50	ENSMUST00000111795.8	ENSMUSG00000029452.19	Tmem116	chr5	protein_coding	transmembrane protein 116
chr5	121602925	121620396	+	121602925;121606048	121605917;121620396	ES	0.33	50	50	ENSMUST00000111795.8	ENSMUSG00000029452.19	Tmem116	chr5	protein_coding	transmembrane protein 116
chr5	121620500	121625813	+	121620500;121623365	121623311;121625813	ES	0.33	50	50	ENSMUST00000111795.8	ENSMUSG00000029452.19	Tmem116	chr5	protein_coding	transmembrane protein 116
chr5	121606048;121614985	121614885;121620396	+	121606048	121620396	cassetteExon	0.5	100	100	ENSMUST00000111795.8	ENSMUSG00000029452.19	Tmem116	chr5	protein_coding	transmembrane protein 116
chr5	121631838	121655864	+	121631838	121632267	A3SS&ES	0.5	50	50	ENSMUST00000111795.8	ENSMUSG00000029452.19	Tmem116	chr5	protein_coding	transmembrane protein 116
chr5	121632340	121633051	+	121632340	121661399	A3SS	0.5	50	50	ENSMUST00000111795.8	ENSMUSG00000029452.19	Tmem116	chr5	protein_coding	transmembrane protein 116
chr5	121590858	121601850	+	121590433	121601850	A5SS	0.25	50	50	ENSMUST00000111795.8	ENSMUSG00000029452.19	Tmem116	chr5	protein_coding	transmembrane protein 116
chr5	121591418	121601850	+	121590433	121601850	A5SS	0.25	50	50	ENSMUST00000111795.8	ENSMUSG00000029452.19	Tmem116	chr5	protein_coding	transmembrane protein 116
chr5	121601333	121601850	+	121590433	121601850	A5SS	0.25	50	50	ENSMUST00000111795.8	ENSMUSG00000029452.19	Tmem116	chr5	protein_coding	transmembrane protein 116
chr5	121591418	121601850	+	121590858	121601850	A5SS	0.25	50	50	ENSMUST00000124247.8	ENSMUSG00000029452.19	Tmem116	chr5	protein_coding	transmembrane protein 116
chr5	121601333	121601850	+	121590858	121601850	A5SS	0.25	50	50	ENSMUST00000124247.8	ENSMUSG00000029452.19	Tmem116	chr5	protein_coding	transmembrane protein 116
chr5	121606048	121625813	+	121606048;121620500	121620396;121625813	ES	0.33	50	50	ENSMUST00000150805.8	ENSMUSG00000029452.19	Tmem116	chr5	protein_coding	transmembrane protein 116
chr5	121601896;121602925	121602862;121620396	+	121601896;121606048	121605917;121620396	MXE	0.5	100	100	ENSMUST00000150805.8	ENSMUSG00000029452.19	Tmem116	chr5	protein_coding	transmembrane protein 116
chr5	121606048	121625813	+	121606048	121620396	3pMXE	0.33	50	50	ENSMUST00000145729.8	ENSMUSG00000029452.19	Tmem116	chr5	protein_coding	transmembrane protein 116
chr5	121614985	121620396	+	121602925	121620396	A5SS	0.33	50	50	ENSMUST00000172722.8	ENSMUSG00000029452.19	Tmem116	chr5	protein_coding	transmembrane protein 116
chr5	121601333	121601850	+	121591418	121601850	A5SS	0.25	50	50	ENSMUST00000156080.8	ENSMUSG00000029452.19	Tmem116	chr5	protein_coding	transmembrane protein 116
chr5	121602925;121620500	121620396;121625813	+	121602925;121606048	121605917;121625813	MXE	0.5	100	100	ENSMUST00000031405.12	ENSMUSG00000029452.19	Tmem116	chr5	protein_coding	transmembrane protein 116
chr5	121606048	121614885	+	121606048	121625813	A3SS	0.33	50	50	ENSMUST00000031405.12	ENSMUSG00000029452.19	Tmem116	chr5	protein_coding	transmembrane protein 116
chr5	121623365	121625813	+	121606048	121625813	A5SS	0.33	50	50	ENSMUST00000031405.12	ENSMUSG00000029452.19	Tmem116	chr5	protein_coding	transmembrane protein 116
chr5	121663830	121665154	-	121663830;121664923	121664808;121665154	ES	0.5	50	50	ENSMUST00000125946.8	ENSMUSG00000105340.6	Gm42878	chr5	protein_coding	predicted gene 42878
chr5	121663830	121664802	-	121663830	121664808	A5SS	0.33	50	50	ENSMUST00000125946.8	ENSMUSG00000105340.6	Gm42878	chr5	protein_coding	predicted gene 42878
chr5	121672493	121673738	-	121672493	121673917	A5SS	0.25	50	50	ENSMUST00000125946.8	ENSMUSG00000105340.6	Gm42878	chr5	protein_coding	predicted gene 42878
chr5	121672493	121675175	-	121672493	121673917	A5SS&ES	0.25	50	50	ENSMUST00000125946.8	ENSMUSG00000105340.6	Gm42878	chr5	protein_coding	predicted gene 42878
chr5	121675283	121675716	-	121675283	121676456	A5SS	0.5	50	50	ENSMUST00000125946.8	ENSMUSG00000105340.6	Gm42878	chr5	protein_coding	predicted gene 42878
chr5	121663830	121665154	-	121663830;121664923	121664802;121665154	ES	0.5	50	50	ENSMUST00000031410.14	ENSMUSG00000029454.16	Mapkapk5	chr5	protein_coding	MAP kinase-activated protein kinase 5
chr5	121672493	121675175	-	121672493;121674006	121673917;121675175	ES	0.5	50	50	ENSMUST00000031410.14	ENSMUSG00000029454.16	Mapkapk5	chr5	protein_coding	MAP kinase-activated protein kinase 5
chr5	121663830	121665154	-	121663830	121664802	A5SS&ES	0.33	50	50	ENSMUST00000152270.8	ENSMUSG00000029454.16	Mapkapk5	chr5	protein_coding	MAP kinase-activated protein kinase 5
chr5	121678638	121683228	-	121672493	121683228	A3SS	0.5	50	50	ENSMUST00000111782.8	ENSMUSG00000029454.16	Mapkapk5	chr5	protein_coding	MAP kinase-activated protein kinase 5
chr5	121672493	121673738	-	121672493	121683228	A5SS	0.25	50	50	ENSMUST00000111782.8	ENSMUSG00000029454.16	Mapkapk5	chr5	protein_coding	MAP kinase-activated protein kinase 5
chr5	121672493	121673917	-	121672493	121683228	A5SS	0.25	50	50	ENSMUST00000111782.8	ENSMUSG00000029454.16	Mapkapk5	chr5	protein_coding	MAP kinase-activated protein kinase 5
chr5	121672493	121675175	-	121672493	121683228	A5SS	0.25	50	50	ENSMUST00000111782.8	ENSMUSG00000029454.16	Mapkapk5	chr5	protein_coding	MAP kinase-activated protein kinase 5
chr5	121672493;121674006	121673738;121675175	-	121672493	121675175	cassetteExon	0.5	100	100	ENSMUST00000196315.2	ENSMUSG00000029454.16	Mapkapk5	chr5	protein_coding	MAP kinase-activated protein kinase 5
chr5	121717804	121718677	-	121717807	121718677	A3SS	0.5	50	50	ENSMUST00000031411.15	ENSMUSG00000029455.15	Aldh2	chr5	protein_coding	aldehyde dehydrogenase 2, mitochondrial
chr5	121710244	121710784	-	121710244	121710739	A5SS	0.5	50	50	ENSMUST00000031411.15	ENSMUSG00000029455.15	Aldh2	chr5	protein_coding	aldehyde dehydrogenase 2, mitochondrial
chr5	121713267	121713959	-	121708824	121713959	A3SS	0.5	50	50	ENSMUST00000199369.5	ENSMUSG00000029455.15	Aldh2	chr5	protein_coding	aldehyde dehydrogenase 2, mitochondrial
chr5	121708824	121710080	-	121708824	121713959	A5SS	0.5	50	50	ENSMUST00000199369.5	ENSMUSG00000029455.15	Aldh2	chr5	protein_coding	aldehyde dehydrogenase 2, mitochondrial
chr5	121746099	121752123	-	121746099;121748229	121747829;121752123	ES	0.5	50	50	ENSMUST00000041252.13	ENSMUSG00000042647.14	Acad12	chr5	protein_coding	acyl-Coenzyme A dehydrogenase family, member 12
chr5	121775457	121780675	-	121775457;121777368	121777187;121780675	ES	0.33	50	50	ENSMUST00000031412.12	ENSMUSG00000029456.13	Acad10	chr5	protein_coding	acyl-Coenzyme A dehydrogenase family, member 10
chr5	121778640	121780675	-	121777368	121780675	A3SS	0.33	50	50	ENSMUST00000031412.12	ENSMUSG00000029456.13	Acad10	chr5	protein_coding	acyl-Coenzyme A dehydrogenase family, member 10
chr5	121778640	121780675	-	121775457	121780675	A3SS	0.33	50	50	ENSMUST00000133775.8	ENSMUSG00000029456.13	Acad10	chr5	protein_coding	acyl-Coenzyme A dehydrogenase family, member 10
chr5	121800224	121803162	+	121800224;121801554	121801359;121803162	ES	0.5	50	50	ENSMUST00000031414.15	ENSMUSG00000029458.15	Brap	chr5	protein_coding	BRCA1 associated protein
chr5	121800224	121801305	+	121800224	121801359	A3SS	0.33	50	50	ENSMUST00000031414.15	ENSMUSG00000029458.15	Brap	chr5	protein_coding	BRCA1 associated protein
chr5	121799345	121800063	+	121798911	121800063	A5SS	0.5	50	50	ENSMUST00000031414.15	ENSMUSG00000029458.15	Brap	chr5	protein_coding	BRCA1 associated protein
chr5	121804780	121810148	+	121803351	121810148	A5SS	0.5	50	50	ENSMUST00000031414.15	ENSMUSG00000029458.15	Brap	chr5	protein_coding	BRCA1 associated protein
chr5	121800224;121801554	121801305;121803162	+	121800224	121803162	cassetteExon	0.5	100	100	ENSMUST00000140996.6	ENSMUSG00000029458.15	Brap	chr5	protein_coding	BRCA1 associated protein
chr5	121800224	121803162	+	121800224	121801359	3pMXE	0.33	50	50	ENSMUST00000148052.2	ENSMUSG00000029458.15	Brap	chr5	protein_coding	BRCA1 associated protein
chr5	121850339	121883786	+	121849586	121883786	A5SS	0.33	50	50	ENSMUST00000162611.8	ENSMUSG00000042605.17	Atxn2	chr5	protein_coding	ataxin 2
chr5	121851087	121883786	+	121849586	121883786	A5SS	0.33	50	50	ENSMUST00000162611.8	ENSMUSG00000042605.17	Atxn2	chr5	protein_coding	ataxin 2
chr5	121917659	121921920	+	121917659;121919605	121919396;121921920	ES	0.5	50	50	ENSMUST00000051950.14	ENSMUSG00000042605.17	Atxn2	chr5	protein_coding	ataxin 2
chr5	121941143	121948914	+	121941143;121944338	121944285;121948914	ES	0.5	50	50	ENSMUST00000051950.14	ENSMUSG00000042605.17	Atxn2	chr5	protein_coding	ataxin 2
chr5	121949675	121952401	+	121949675;121951616	121951448;121952401	ES	0.5	50	50	ENSMUST00000051950.14	ENSMUSG00000042605.17	Atxn2	chr5	protein_coding	ataxin 2
chr5	121935438	121935784	+	121935438	121935788	A3SS	0.5	50	50	ENSMUST00000051950.14	ENSMUSG00000042605.17	Atxn2	chr5	protein_coding	ataxin 2
chr5	121949059	121949527	+	121949059	121949448	A3SS	0.5	50	50	ENSMUST00000051950.14	ENSMUSG00000042605.17	Atxn2	chr5	protein_coding	ataxin 2
chr5	121949675	121952656	+	121949675	121951448	A3SS&ES	0.33	50	50	ENSMUST00000051950.14	ENSMUSG00000042605.17	Atxn2	chr5	protein_coding	ataxin 2
chr5	121851087	121883786	+	121850339	121883786	A5SS	0.33	50	50	ENSMUST00000051950.14	ENSMUSG00000042605.17	Atxn2	chr5	protein_coding	ataxin 2
chr5	121935848	121940144	+	121935854	121940144	A5SS	0.33	50	50	ENSMUST00000051950.14	ENSMUSG00000042605.17	Atxn2	chr5	protein_coding	ataxin 2
chr5	121939440	121940144	+	121935854	121940144	A5SS	0.33	50	50	ENSMUST00000051950.14	ENSMUSG00000042605.17	Atxn2	chr5	protein_coding	ataxin 2
chr5	121917659	121921920	+	121917659	121919396	3pMXE	0.5	50	50	ENSMUST00000225761.2	ENSMUSG00000042605.17	Atxn2	chr5	protein_coding	ataxin 2
chr5	121949675	121953144	+	121949675	121952401	3pMXE	0.25	50	50	ENSMUST00000161064.8	ENSMUSG00000042605.17	Atxn2	chr5	protein_coding	ataxin 2
chr5	121949675	121952656	+	121949675	121952401	A3SS	0.25	50	50	ENSMUST00000161064.8	ENSMUSG00000042605.17	Atxn2	chr5	protein_coding	ataxin 2
chr5	121939440	121940144	+	121935848	121940144	A5SS	0.33	50	50	ENSMUST00000162327.8	ENSMUSG00000042605.17	Atxn2	chr5	protein_coding	ataxin 2
chr5	121941143	121948914	+	121944338	121948914	5pMXE	0.5	50	50	ENSMUST00000159928.2	ENSMUSG00000042605.17	Atxn2	chr5	protein_coding	ataxin 2
chr5	121949675	121952401	+	121949675	121951448	3pMXE	0.25	50	50	ENSMUST00000160462.2	ENSMUSG00000042605.17	Atxn2	chr5	protein_coding	ataxin 2
chr5	121949675	121953144	+	121949675	121951448	3pMXE	0.25	50	50	ENSMUST00000160462.2	ENSMUSG00000042605.17	Atxn2	chr5	protein_coding	ataxin 2
chr5	121949675	121952656	+	121949675	121953144	A3SS	0.25	50	50	ENSMUST00000160220.2	ENSMUSG00000042605.17	Atxn2	chr5	protein_coding	ataxin 2
chr5	121967139	121975637	-	121967139	121974613	5pMXE	0.33	50	50	ENSMUST00000136960.8	ENSMUSG00000042594.17	Sh2b3	chr5	protein_coding	SH2B adaptor protein 3
chr5	121967139;121970653	121970566;121974613	-	121967139	121974613	cassetteExon	0.5	100	100	ENSMUST00000136960.8	ENSMUSG00000042594.17	Sh2b3	chr5	protein_coding	SH2B adaptor protein 3
chr5	121956712	121956823	-	121956742	121956823	A3SS	0.5	50	50	ENSMUST00000086310.8	ENSMUSG00000042594.17	Sh2b3	chr5	protein_coding	SH2B adaptor protein 3
chr5	121970653	121973914	-	121970653	121974613	A5SS	0.33	50	50	ENSMUST00000086310.8	ENSMUSG00000042594.17	Sh2b3	chr5	protein_coding	SH2B adaptor protein 3
chr5	121970653	121974283	-	121970653	121974613	A5SS	0.33	50	50	ENSMUST00000086310.8	ENSMUSG00000042594.17	Sh2b3	chr5	protein_coding	SH2B adaptor protein 3
chr5	121970653	121974283	-	121970653	121973914	5pMXE	0.33	50	50	ENSMUST00000122426.8	ENSMUSG00000042594.17	Sh2b3	chr5	protein_coding	SH2B adaptor protein 3
chr5	121967139	121970566	-	121967139	121975637	A5SS	0.33	50	50	ENSMUST00000197892.3	ENSMUSG00000042594.17	Sh2b3	chr5	protein_coding	SH2B adaptor protein 3
chr5	121987187;121988609	121988533;121989231	+	121987187	121989231	cassetteExon	0.5	100	100	ENSMUST00000198271.5	ENSMUSG00000044134.10	Pheta1	chr5	protein_coding	PH domain containing endocytic trafficking adaptor 1
chr5	121989342	121990621	+	121989342	121990614	A3SS	0.5	50	50	ENSMUST00000198271.5	ENSMUSG00000044134.10	Pheta1	chr5	protein_coding	PH domain containing endocytic trafficking adaptor 1
chr5	122022886	122025417	-	122022886;122024021	122023901;122025417	ES	0.5	50	50	ENSMUST00000111752.10	ENSMUSG00000042589.19	Cux2	chr5	protein_coding	cut-like homeobox 2
chr5	122011304	122011720	-	122011214	122011720	A3SS	0.5	50	50	ENSMUST00000111752.10	ENSMUSG00000042589.19	Cux2	chr5	protein_coding	cut-like homeobox 2
chr5	122033729	122036340	-	122025551	122036340	A3SS	0.5	50	50	ENSMUST00000111752.10	ENSMUSG00000042589.19	Cux2	chr5	protein_coding	cut-like homeobox 2
chr5	122025551	122033215	-	122025551	122036340	A5SS	0.5	50	50	ENSMUST00000111752.10	ENSMUSG00000042589.19	Cux2	chr5	protein_coding	cut-like homeobox 2
chr5	122036418	122053029	-	122036418	122059377	A5SS	0.33	50	50	ENSMUST00000111752.10	ENSMUSG00000042589.19	Cux2	chr5	protein_coding	cut-like homeobox 2
chr5	122036418	122054759	-	122036418	122059377	A5SS	0.33	50	50	ENSMUST00000111752.10	ENSMUSG00000042589.19	Cux2	chr5	protein_coding	cut-like homeobox 2
chr5	122062978	122140294	-	122062978	122181833	A5SS	0.33	50	50	ENSMUST00000111752.10	ENSMUSG00000042589.19	Cux2	chr5	protein_coding	cut-like homeobox 2
chr5	122062978	122185634	-	122062978	122181833	A5SS&ES	0.33	50	50	ENSMUST00000111752.10	ENSMUSG00000042589.19	Cux2	chr5	protein_coding	cut-like homeobox 2
chr5	122181907	122185634	-	122181907	122187839	A5SS	0.5	50	50	ENSMUST00000111752.10	ENSMUSG00000042589.19	Cux2	chr5	protein_coding	cut-like homeobox 2
chr5	122062978	122185634	-	122062978;122181907	122181833;122185634	ES	0.5	50	50	ENSMUST00000086317.12	ENSMUSG00000042589.19	Cux2	chr5	protein_coding	cut-like homeobox 2
chr5	122036418	122054759	-	122036418	122053029	5pMXE	0.33	50	50	ENSMUST00000133760.8	ENSMUSG00000042589.19	Cux2	chr5	protein_coding	cut-like homeobox 2
chr5	122062978	122140294	-	122062978	122188079	A5SS	0.25	50	50	ENSMUST00000154139.8	ENSMUSG00000042589.19	Cux2	chr5	protein_coding	cut-like homeobox 2
chr5	122062978	122181833	-	122062978	122188079	A5SS	0.25	50	50	ENSMUST00000154139.8	ENSMUSG00000042589.19	Cux2	chr5	protein_coding	cut-like homeobox 2
chr5	122062978	122185634	-	122062978	122188079	A5SS	0.25	50	50	ENSMUST00000154139.8	ENSMUSG00000042589.19	Cux2	chr5	protein_coding	cut-like homeobox 2
chr5	122062978	122185634	-	122062978	122140294	5pMXE	0.25	50	50	ENSMUST00000134326.2	ENSMUSG00000042589.19	Cux2	chr5	protein_coding	cut-like homeobox 2
chr5	122239092;122239544	122239469;122239812	+	122239092	122239812	cassetteExon	0.5	100	100	ENSMUST00000014080.13	ENSMUSG00000013936.13	Myl2	chr5	protein_coding	myosin, light polypeptide 2, regulatory, cardiac, slow
chr5	122239092;122239587	122239469;122239812	+	122239092	122239812	cassetteExon	0.5	100	100	ENSMUST00000014080.13	ENSMUSG00000013936.13	Myl2	chr5	protein_coding	myosin, light polypeptide 2, regulatory, cardiac, slow
chr5	122239092;122239745	122239469;122239812	+	122239092	122239812	cassetteExon	0.5	100	100	ENSMUST00000014080.13	ENSMUSG00000013936.13	Myl2	chr5	protein_coding	myosin, light polypeptide 2, regulatory, cardiac, slow
chr5	122241998;122242746	122242681;122242890	+	122241998	122242890	cassetteExon	0.5	100	100	ENSMUST00000014080.13	ENSMUSG00000013936.13	Myl2	chr5	protein_coding	myosin, light polypeptide 2, regulatory, cardiac, slow
chr5	122239128	122239812	+	122239092	122239812	A5SS	0.2	50	50	ENSMUST00000014080.13	ENSMUSG00000013936.13	Myl2	chr5	protein_coding	myosin, light polypeptide 2, regulatory, cardiac, slow
chr5	122241293	122241894	+	122240834	122241894	A5SS	0.33	50	50	ENSMUST00000014080.13	ENSMUSG00000013936.13	Myl2	chr5	protein_coding	myosin, light polypeptide 2, regulatory, cardiac, slow
chr5	122241358	122241894	+	122240834	122241894	A5SS	0.33	50	50	ENSMUST00000014080.13	ENSMUSG00000013936.13	Myl2	chr5	protein_coding	myosin, light polypeptide 2, regulatory, cardiac, slow
chr5	122239128	122239812	+	122239544	122239812	A5SS&ES	0.2	50	50	ENSMUST00000139213.8	ENSMUSG00000013936.13	Myl2	chr5	protein_coding	myosin, light polypeptide 2, regulatory, cardiac, slow
chr5	122239587	122239812	+	122239544	122239812	A5SS	0.2	50	50	ENSMUST00000139213.8	ENSMUSG00000013936.13	Myl2	chr5	protein_coding	myosin, light polypeptide 2, regulatory, cardiac, slow
chr5	122239745	122239812	+	122239544	122239812	A5SS	0.2	50	50	ENSMUST00000139213.8	ENSMUSG00000013936.13	Myl2	chr5	protein_coding	myosin, light polypeptide 2, regulatory, cardiac, slow
chr5	122239587	122239812	+	122239128	122239812	A5SS	0.2	50	50	ENSMUST00000155612.8	ENSMUSG00000013936.13	Myl2	chr5	protein_coding	myosin, light polypeptide 2, regulatory, cardiac, slow
chr5	122239745	122239812	+	122239128	122239812	A5SS	0.2	50	50	ENSMUST00000155612.8	ENSMUSG00000013936.13	Myl2	chr5	protein_coding	myosin, light polypeptide 2, regulatory, cardiac, slow
chr5	122239092	122239812	+	122239544	122239812	5pMXE	0.2	50	50	ENSMUST00000147178.5	ENSMUSG00000013936.13	Myl2	chr5	protein_coding	myosin, light polypeptide 2, regulatory, cardiac, slow
chr5	122239092	122239812	+	122239587	122239812	5pMXE	0.2	50	50	ENSMUST00000150535.8	ENSMUSG00000013936.13	Myl2	chr5	protein_coding	myosin, light polypeptide 2, regulatory, cardiac, slow
chr5	122239745	122239812	+	122239587	122239812	A5SS	0.2	50	50	ENSMUST00000150535.8	ENSMUSG00000013936.13	Myl2	chr5	protein_coding	myosin, light polypeptide 2, regulatory, cardiac, slow
chr5	122239092	122239812	+	122239745	122239812	5pMXE	0.2	50	50	ENSMUST00000153816.6	ENSMUSG00000013936.13	Myl2	chr5	protein_coding	myosin, light polypeptide 2, regulatory, cardiac, slow
chr5	122241998	122242890	+	122241998	122242681	3pMXE	0.5	50	50	ENSMUST00000146733.5	ENSMUSG00000013936.13	Myl2	chr5	protein_coding	myosin, light polypeptide 2, regulatory, cardiac, slow
chr5	122241293	122241894	+	122241358	122241894	A5SS	0.33	50	50	ENSMUST00000123913.8	ENSMUSG00000013936.13	Myl2	chr5	protein_coding	myosin, light polypeptide 2, regulatory, cardiac, slow
chr5	122272956	122276882	-	122272956	122275927	5pMXE	0.5	50	50	ENSMUST00000058960.14	ENSMUSG00000043036.14	Ccdc63	chr5	protein_coding	coiled-coil domain containing 63
chr5	122265659;122267261	122267142;122267786	-	122265659	122267786	cassetteExon	0.5	100	100	ENSMUST00000058960.14	ENSMUSG00000043036.14	Ccdc63	chr5	protein_coding	coiled-coil domain containing 63
chr5	122267955	122268352	-	122268018	122268352	A3SS	0.5	50	50	ENSMUST00000058960.14	ENSMUSG00000043036.14	Ccdc63	chr5	protein_coding	coiled-coil domain containing 63
chr5	122268468	122269984	-	122268468	122272782	A5SS	0.5	50	50	ENSMUST00000058960.14	ENSMUSG00000043036.14	Ccdc63	chr5	protein_coding	coiled-coil domain containing 63
chr5	122307212	122310795	+	122307212;122309989	122309885;122310795	ES	0.5	50	50	ENSMUST00000102528.11	ENSMUSG00000004455.17	Ppp1cc	chr5	protein_coding	protein phosphatase 1 catalytic subunit gamma
chr5	122297111	122306238	+	122296678	122306238	A5SS	0.5	50	50	ENSMUST00000102528.11	ENSMUSG00000004455.17	Ppp1cc	chr5	protein_coding	protein phosphatase 1 catalytic subunit gamma
chr5	122310866	122311209	+	122311018	122311209	A5SS	0.5	50	50	ENSMUST00000102528.11	ENSMUSG00000004455.17	Ppp1cc	chr5	protein_coding	protein phosphatase 1 catalytic subunit gamma
chr5	122307212	122310795	+	122309989	122310795	5pMXE	0.5	50	50	ENSMUST00000142562.2	ENSMUSG00000004455.17	Ppp1cc	chr5	protein_coding	protein phosphatase 1 catalytic subunit gamma
chr5	122354426	122375744	+	122354426	122371483	3pMXE	0.5	50	50	ENSMUST00000145854.8	ENSMUSG00000064267.14	Hvcn1	chr5	protein_coding	hydrogen voltage-gated channel 1
chr5	122347984	122348405	+	122345219	122348405	A5SS	0.33	50	50	ENSMUST00000145854.8	ENSMUSG00000064267.14	Hvcn1	chr5	protein_coding	hydrogen voltage-gated channel 1
chr5	122348315	122348405	+	122345219	122348405	A5SS	0.33	50	50	ENSMUST00000145854.8	ENSMUSG00000064267.14	Hvcn1	chr5	protein_coding	hydrogen voltage-gated channel 1
chr5	122354426	122375744	+	122354426;122371755	122371483;122375744	ES	0.5	50	50	ENSMUST00000072602.14	ENSMUSG00000064267.14	Hvcn1	chr5	protein_coding	hydrogen voltage-gated channel 1
chr5	122348315	122348405	+	122347984	122348405	A5SS	0.33	50	50	ENSMUST00000072602.14	ENSMUSG00000064267.14	Hvcn1	chr5	protein_coding	hydrogen voltage-gated channel 1
chr5	122392646	122396898	-	122392646;122395684	122395533;122396898	ES	0.5	50	50	ENSMUST00000111738.8	ENSMUSG00000038593.19	Tctn1	chr5	protein_coding	tectonic family member 1
chr5	122384634	122385983	-	122385680	122385983	A3SS&ES	0.33	50	50	ENSMUST00000111738.8	ENSMUSG00000038593.19	Tctn1	chr5	protein_coding	tectonic family member 1
chr5	122384697	122385983	-	122385680	122385983	A3SS&ES	0.33	50	50	ENSMUST00000111738.8	ENSMUSG00000038593.19	Tctn1	chr5	protein_coding	tectonic family member 1
chr5	122384634	122385983	-	122384697	122385983	A3SS	0.33	50	50	ENSMUST00000141281.4	ENSMUSG00000038593.19	Tctn1	chr5	protein_coding	tectonic family member 1
chr5	122433909	122446194	+	122422972	122446194	A5SS	0.5	50	50	ENSMUST00000053426.15	ENSMUSG00000038582.16	Pptc7	chr5	protein_coding	PTC7 protein phosphatase homolog
chr5	122489773	122490607	-	122489773	122490609	A5SS	0.5	50	50	ENSMUST00000117263.8	ENSMUSG00000038569.14	Rad9b	chr5	protein_coding	RAD9 checkpoint clamp component B
chr5	122472579	122477795	-	122464042	122477795	A3SS	0.5	50	50	ENSMUST00000149600.8	ENSMUSG00000038569.14	Rad9b	chr5	protein_coding	RAD9 checkpoint clamp component B
chr5	122464042	122469532	-	122464042	122477795	A5SS	0.5	50	50	ENSMUST00000149600.8	ENSMUSG00000038569.14	Rad9b	chr5	protein_coding	RAD9 checkpoint clamp component B
chr5	122498267	122500868	+	122498267;122500334	122500099;122500868	ES	0.5	50	50	ENSMUST00000155671.8	ENSMUSG00000029462.19	Vps29	chr5	protein_coding	VPS29 retromer complex component
chr5	122492539;122494868	122494857;122498076	+	122492539	122498076	cassetteExon	0.5	100	100	ENSMUST00000155671.8	ENSMUSG00000029462.19	Vps29	chr5	protein_coding	VPS29 retromer complex component
chr5	122492539;122497760	122497715;122498076	+	122492539	122498076	cassetteExon	0.5	100	100	ENSMUST00000155671.8	ENSMUSG00000029462.19	Vps29	chr5	protein_coding	VPS29 retromer complex component
chr5	122492539	122498009	+	122492539	122498076	A3SS	0.2	50	50	ENSMUST00000155671.8	ENSMUSG00000029462.19	Vps29	chr5	protein_coding	VPS29 retromer complex component
chr5	122492539	122498092	+	122492539	122498076	A3SS	0.2	50	50	ENSMUST00000155671.8	ENSMUSG00000029462.19	Vps29	chr5	protein_coding	VPS29 retromer complex component
chr5	122492566	122498076	+	122492539	122498076	A5SS	0.25	50	50	ENSMUST00000155671.8	ENSMUSG00000029462.19	Vps29	chr5	protein_coding	VPS29 retromer complex component
chr5	122492539;122497760	122497715;122498076	+	122492539;122494868	122494857;122498076	MXE	0.5	100	100	ENSMUST00000118830.8	ENSMUSG00000029462.19	Vps29	chr5	protein_coding	VPS29 retromer complex component
chr5	122492539	122498009	+	122492539	122494857	A3SS&ES	0.2	50	50	ENSMUST00000118830.8	ENSMUSG00000029462.19	Vps29	chr5	protein_coding	VPS29 retromer complex component
chr5	122492539	122498092	+	122492539	122494857	A3SS&ES	0.2	50	50	ENSMUST00000118830.8	ENSMUSG00000029462.19	Vps29	chr5	protein_coding	VPS29 retromer complex component
chr5	122492566	122498076	+	122494868	122498076	A5SS&ES	0.25	50	50	ENSMUST00000118830.8	ENSMUSG00000029462.19	Vps29	chr5	protein_coding	VPS29 retromer complex component
chr5	122498267	122500868	+	122498267	122500099	3pMXE	0.5	50	50	ENSMUST00000117868.8	ENSMUSG00000029462.19	Vps29	chr5	protein_coding	VPS29 retromer complex component
chr5	122492539	122497715	+	122492539	122498009	A3SS	0.2	50	50	ENSMUST00000132785.2	ENSMUSG00000029462.19	Vps29	chr5	protein_coding	VPS29 retromer complex component
chr5	122492539	122498092	+	122492539	122498009	A3SS	0.2	50	50	ENSMUST00000132785.2	ENSMUSG00000029462.19	Vps29	chr5	protein_coding	VPS29 retromer complex component
chr5	122492539	122497715	+	122492539	122498092	A3SS	0.2	50	50	ENSMUST00000111729.10	ENSMUSG00000029462.19	Vps29	chr5	protein_coding	VPS29 retromer complex component
chr5	122497760	122498076	+	122492566	122498076	A5SS	0.25	50	50	ENSMUST00000145821.2	ENSMUSG00000029462.19	Vps29	chr5	protein_coding	VPS29 retromer complex component
chr5	122518240	122519253	+	122518168	122519253	A5SS	0.5	50	50	ENSMUST00000127608.8	ENSMUSG00000029464.11	Gpn3	chr5	protein_coding	GPN-loop GTPase 3
chr5	122519368	122520111	+	122519557	122520111	A5SS	0.5	50	50	ENSMUST00000127608.8	ENSMUSG00000029464.11	Gpn3	chr5	protein_coding	GPN-loop GTPase 3
chr5	122519368	122520111	+	122519368;122519557	122519461;122520111	ES	0.5	50	50	ENSMUST00000031420.11	ENSMUSG00000029464.11	Gpn3	chr5	protein_coding	GPN-loop GTPase 3
chr5	122543241	122552067	+	122543241	122543932	3pMXE	0.5	50	50	ENSMUST00000102525.11	ENSMUSG00000029465.15	Arpc3	chr5	protein_coding	actin related protein 2/3 complex, subunit 3
chr5	122533949	122534880	+	122530060	122534880	A5SS	0.5	50	50	ENSMUST00000102525.11	ENSMUSG00000029465.15	Arpc3	chr5	protein_coding	actin related protein 2/3 complex, subunit 3
chr5	122538525	122539710	+	122534979	122539710	A5SS	0.33	50	50	ENSMUST00000102525.11	ENSMUSG00000029465.15	Arpc3	chr5	protein_coding	actin related protein 2/3 complex, subunit 3
chr5	122538531	122539710	+	122534979	122539710	A5SS	0.33	50	50	ENSMUST00000102525.11	ENSMUSG00000029465.15	Arpc3	chr5	protein_coding	actin related protein 2/3 complex, subunit 3
chr5	122538531	122539710	+	122538525	122539710	A5SS	0.33	50	50	ENSMUST00000111716.8	ENSMUSG00000029465.15	Arpc3	chr5	protein_coding	actin related protein 2/3 complex, subunit 3
chr5	122579503	122579686	+	122579503	122581867	A3SS	0.5	50	50	ENSMUST00000122010.8	ENSMUSG00000029466.12	Anapc7	chr5	protein_coding	anaphase promoting complex subunit 7
chr5	122627160	122627301	-	122611353	122627301	A3SS	0.5	50	50	ENSMUST00000179939.8	ENSMUSG00000029467.16	Atp2a2	chr5	protein_coding	ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
chr5	122592367	122595366	-	122592367	122593956	A5SS	0.5	50	50	ENSMUST00000179939.8	ENSMUSG00000029467.16	Atp2a2	chr5	protein_coding	ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
chr5	122747416	122749006	-	122747416;122748244	122748141;122749006	ES	0.33	50	50	ENSMUST00000031426.14	ENSMUSG00000029469.15	Ift81	chr5	protein_coding	intraflagellar transport 81
chr5	122748240	122749006	-	122748244	122749006	A3SS	0.33	50	50	ENSMUST00000031426.14	ENSMUSG00000029469.15	Ift81	chr5	protein_coding	intraflagellar transport 81
chr5	122710852	122712119	-	122710852	122729143	A5SS	0.5	50	50	ENSMUST00000031426.14	ENSMUSG00000029469.15	Ift81	chr5	protein_coding	intraflagellar transport 81
chr5	122740813	122741505	-	122740813	122745031	A5SS	0.5	50	50	ENSMUST00000031426.14	ENSMUSG00000029469.15	Ift81	chr5	protein_coding	intraflagellar transport 81
chr5	122749170	122752257	-	122749170	122752501	A5SS	0.5	50	50	ENSMUST00000031426.14	ENSMUSG00000029469.15	Ift81	chr5	protein_coding	intraflagellar transport 81
chr5	122747416	122749006	-	122747416;122748240	122748141;122749006	ES	0.33	50	50	ENSMUST00000196452.5	ENSMUSG00000029469.15	Ift81	chr5	protein_coding	intraflagellar transport 81
chr5	122814826	122829316	+	122814826	122818870	3pMXE	0.33	50	50	ENSMUST00000100737.10	ENSMUSG00000029468.18	P2rx7	chr5	protein_coding	purinergic receptor P2X, ligand-gated ion channel, 7
chr5	122782261	122785412	+	122782261	122790790	A3SS	0.5	50	50	ENSMUST00000100737.10	ENSMUSG00000029468.18	P2rx7	chr5	protein_coding	purinergic receptor P2X, ligand-gated ion channel, 7
chr5	122792292	122793042	+	122792292	122795075	A3SS	0.5	50	50	ENSMUST00000100737.10	ENSMUSG00000029468.18	P2rx7	chr5	protein_coding	purinergic receptor P2X, ligand-gated ion channel, 7
chr5	122814826	122821238	+	122814826	122818870	A3SS	0.33	50	50	ENSMUST00000100737.10	ENSMUSG00000029468.18	P2rx7	chr5	protein_coding	purinergic receptor P2X, ligand-gated ion channel, 7
chr5	122788602	122790790	+	122782261	122790790	A5SS	0.5	50	50	ENSMUST00000100737.10	ENSMUSG00000029468.18	P2rx7	chr5	protein_coding	purinergic receptor P2X, ligand-gated ion channel, 7
chr5	122814826	122829316	+	122814826	122821238	3pMXE	0.33	50	50	ENSMUST00000121489.8	ENSMUSG00000029468.18	P2rx7	chr5	protein_coding	purinergic receptor P2X, ligand-gated ion channel, 7
chr5	122820087	122821238	+	122814826	122821238	A5SS	0.5	50	50	ENSMUST00000121489.8	ENSMUSG00000029468.18	P2rx7	chr5	protein_coding	purinergic receptor P2X, ligand-gated ion channel, 7
chr5	122845850	122856376	+	122845850;122852609	122852462;122856376	ES	0.5	50	50	ENSMUST00000031429.14	ENSMUSG00000029470.16	P2rx4	chr5	protein_coding	purinergic receptor P2X, ligand-gated ion channel 4
chr5	122857289	122863053	+	122857289;122862737	122862657;122863053	ES	0.5	50	50	ENSMUST00000031429.14	ENSMUSG00000029470.16	P2rx4	chr5	protein_coding	purinergic receptor P2X, ligand-gated ion channel 4
chr5	122865354	122865808	+	122865354;122865527	122865462;122865808	ES	0.5	50	50	ENSMUST00000031429.14	ENSMUSG00000029470.16	P2rx4	chr5	protein_coding	purinergic receptor P2X, ligand-gated ion channel 4
chr5	122872308	122875496	-	122872308;122875093	122875051;122875496	ES	0.5	50	50	ENSMUST00000111668.8	ENSMUSG00000029471.14	Camkk2	chr5	protein_coding	calcium/calmodulin-dependent protein kinase kinase 2, beta
chr5	122875596	122881933	-	122875596;122880291	122880163;122881933	ES	0.5	50	50	ENSMUST00000111668.8	ENSMUSG00000029471.14	Camkk2	chr5	protein_coding	calcium/calmodulin-dependent protein kinase kinase 2, beta
chr5	122897063	122917315	-	122897063;122902365	122901837;122917315	ES	0.33	50	50	ENSMUST00000111668.8	ENSMUSG00000029471.14	Camkk2	chr5	protein_coding	calcium/calmodulin-dependent protein kinase kinase 2, beta
chr5	122897063;122901497	122901466;122901837	-	122897063	122901837	cassetteExon	0.5	100	100	ENSMUST00000111668.8	ENSMUSG00000029471.14	Camkk2	chr5	protein_coding	calcium/calmodulin-dependent protein kinase kinase 2, beta
chr5	122902365;122908046	122907962;122917315	-	122902365	122917315	cassetteExon	0.5	100	100	ENSMUST00000111668.8	ENSMUSG00000029471.14	Camkk2	chr5	protein_coding	calcium/calmodulin-dependent protein kinase kinase 2, beta
chr5	122872308	122875496	-	122875093	122875496	A3SS	0.5	50	50	ENSMUST00000198029.5	ENSMUSG00000029471.14	Camkk2	chr5	protein_coding	calcium/calmodulin-dependent protein kinase kinase 2, beta
chr5	122875596	122881933	-	122880291	122881933	3pMXE	0.5	50	50	ENSMUST00000199830.5	ENSMUSG00000029471.14	Camkk2	chr5	protein_coding	calcium/calmodulin-dependent protein kinase kinase 2, beta
chr5	122902365	122917315	-	122897063	122917315	A3SS	0.33	50	50	ENSMUST00000199988.2	ENSMUSG00000029471.14	Camkk2	chr5	protein_coding	calcium/calmodulin-dependent protein kinase kinase 2, beta
chr5	122908046	122917315	-	122897063	122917315	A3SS	0.33	50	50	ENSMUST00000199988.2	ENSMUSG00000029471.14	Camkk2	chr5	protein_coding	calcium/calmodulin-dependent protein kinase kinase 2, beta
chr5	122897063	122901466	-	122897063	122917315	A5SS	0.33	50	50	ENSMUST00000199988.2	ENSMUSG00000029471.14	Camkk2	chr5	protein_coding	calcium/calmodulin-dependent protein kinase kinase 2, beta
chr5	122897063	122901837	-	122897063	122917315	A5SS	0.33	50	50	ENSMUST00000199988.2	ENSMUSG00000029471.14	Camkk2	chr5	protein_coding	calcium/calmodulin-dependent protein kinase kinase 2, beta
chr5	122929997	122932480	-	122929997;122931621	122931500;122932480	ES	0.5	50	50	ENSMUST00000086216.9	ENSMUSG00000029472.14	Anapc5	chr5	protein_coding	anaphase-promoting complex subunit 5
chr5	122940282	122944308	-	122940282;122940967	122940886;122944308	ES	0.5	50	50	ENSMUST00000086216.9	ENSMUSG00000029472.14	Anapc5	chr5	protein_coding	anaphase-promoting complex subunit 5
chr5	122956067	122957671	-	122956067;122957026	122956917;122957671	ES	0.5	50	50	ENSMUST00000086216.9	ENSMUSG00000029472.14	Anapc5	chr5	protein_coding	anaphase-promoting complex subunit 5
chr5	122926503	122929671	-	122926527	122929671	A3SS	0.5	50	50	ENSMUST00000086216.9	ENSMUSG00000029472.14	Anapc5	chr5	protein_coding	anaphase-promoting complex subunit 5
chr5	122929798	122929890	-	122929818	122929890	A3SS	0.5	50	50	ENSMUST00000086216.9	ENSMUSG00000029472.14	Anapc5	chr5	protein_coding	anaphase-promoting complex subunit 5
chr5	122938656	122940193	-	122938695	122940193	A3SS	0.33	50	50	ENSMUST00000086216.9	ENSMUSG00000029472.14	Anapc5	chr5	protein_coding	anaphase-promoting complex subunit 5
chr5	122938671	122940193	-	122938695	122940193	A3SS	0.33	50	50	ENSMUST00000086216.9	ENSMUSG00000029472.14	Anapc5	chr5	protein_coding	anaphase-promoting complex subunit 5
chr5	122956067	122956606	-	122956067	122956917	A5SS	0.25	50	50	ENSMUST00000086216.9	ENSMUSG00000029472.14	Anapc5	chr5	protein_coding	anaphase-promoting complex subunit 5
chr5	122956067	122956799	-	122956067	122956917	A5SS	0.25	50	50	ENSMUST00000086216.9	ENSMUSG00000029472.14	Anapc5	chr5	protein_coding	anaphase-promoting complex subunit 5
chr5	122938671	122940193	-	122938656	122940193	A3SS	0.33	50	50	ENSMUST00000196423.5	ENSMUSG00000029472.14	Anapc5	chr5	protein_coding	anaphase-promoting complex subunit 5
chr5	122929997	122932480	-	122929997	122931500	5pMXE	0.5	50	50	ENSMUST00000199130.2	ENSMUSG00000029472.14	Anapc5	chr5	protein_coding	anaphase-promoting complex subunit 5
chr5	122929997	122932480	-	122931621	122932480	3pMXE	0.5	50	50	ENSMUST00000196753.5	ENSMUSG00000029472.14	Anapc5	chr5	protein_coding	anaphase-promoting complex subunit 5
chr5	122956067	122956799	-	122956067	122956606	5pMXE	0.25	50	50	ENSMUST00000200415.5	ENSMUSG00000029472.14	Anapc5	chr5	protein_coding	anaphase-promoting complex subunit 5
chr5	122956067	122957671	-	122956067	122956606	5pMXE	0.25	50	50	ENSMUST00000200415.5	ENSMUSG00000029472.14	Anapc5	chr5	protein_coding	anaphase-promoting complex subunit 5
chr5	122956067;122957026	122956606;122957671	-	122956067	122957671	cassetteExon	0.5	100	100	ENSMUST00000199926.2	ENSMUSG00000029472.14	Anapc5	chr5	protein_coding	anaphase-promoting complex subunit 5
chr5	122956067;122957026	122956799;122957671	-	122956067	122957671	cassetteExon	0.5	100	100	ENSMUST00000199926.2	ENSMUSG00000029472.14	Anapc5	chr5	protein_coding	anaphase-promoting complex subunit 5
chr5	122988361	123002050	+	122988361;122999970	122999752;123002050	ES	0.5	50	50	ENSMUST00000031434.8	ENSMUSG00000029474.8	Rnf34	chr5	protein_coding	ring finger protein 34
chr5	123019121	123020027	-	123019121;123019813	123019700;123020027	ES	0.33	50	50	ENSMUST00000046073.16	ENSMUSG00000029475.18	Kdm2b	chr5	protein_coding	lysine (K)-specific demethylase 2B
chr5	123120886	123125725	-	123120886;123122603	123122525;123125725	ES	0.5	50	50	ENSMUST00000046073.16	ENSMUSG00000029475.18	Kdm2b	chr5	protein_coding	lysine (K)-specific demethylase 2B
chr5	123125869	123127688	-	123125869	123126931	5pMXE	0.25	50	50	ENSMUST00000046073.16	ENSMUSG00000029475.18	Kdm2b	chr5	protein_coding	lysine (K)-specific demethylase 2B
chr5	123125869	123149866	-	123125869	123126931	5pMXE	0.25	50	50	ENSMUST00000046073.16	ENSMUSG00000029475.18	Kdm2b	chr5	protein_coding	lysine (K)-specific demethylase 2B
chr5	123026817	123038212	-	123026817	123059448	A5SS	0.33	50	50	ENSMUST00000046073.16	ENSMUSG00000029475.18	Kdm2b	chr5	protein_coding	lysine (K)-specific demethylase 2B
chr5	123026817	123055737	-	123026817	123059448	A5SS	0.33	50	50	ENSMUST00000046073.16	ENSMUSG00000029475.18	Kdm2b	chr5	protein_coding	lysine (K)-specific demethylase 2B
chr5	123059534	123059968	-	123059534	123070530	A5SS	0.5	50	50	ENSMUST00000046073.16	ENSMUSG00000029475.18	Kdm2b	chr5	protein_coding	lysine (K)-specific demethylase 2B
chr5	123085943	123086025	-	123085943	123087133	A5SS	0.5	50	50	ENSMUST00000046073.16	ENSMUSG00000029475.18	Kdm2b	chr5	protein_coding	lysine (K)-specific demethylase 2B
chr5	123087226	123089797	-	123087226	123099076	A5SS	0.25	50	50	ENSMUST00000046073.16	ENSMUSG00000029475.18	Kdm2b	chr5	protein_coding	lysine (K)-specific demethylase 2B
chr5	123087226	123090395	-	123087226	123099076	A5SS	0.25	50	50	ENSMUST00000046073.16	ENSMUSG00000029475.18	Kdm2b	chr5	protein_coding	lysine (K)-specific demethylase 2B
chr5	123087226	123091105	-	123087226	123099076	A5SS	0.25	50	50	ENSMUST00000046073.16	ENSMUSG00000029475.18	Kdm2b	chr5	protein_coding	lysine (K)-specific demethylase 2B
chr5	123120886	123122911	-	123120886	123122525	A5SS&ES	0.33	50	50	ENSMUST00000046073.16	ENSMUSG00000029475.18	Kdm2b	chr5	protein_coding	lysine (K)-specific demethylase 2B
chr5	123125869	123126530	-	123125869	123126931	A5SS	0.25	50	50	ENSMUST00000046073.16	ENSMUSG00000029475.18	Kdm2b	chr5	protein_coding	lysine (K)-specific demethylase 2B
chr5	123026817	123055737	-	123026817	123038212	5pMXE	0.33	50	50	ENSMUST00000031435.14	ENSMUSG00000029475.18	Kdm2b	chr5	protein_coding	lysine (K)-specific demethylase 2B
chr5	123018915	123020027	-	123018915;123019121	123019083;123020027	ES	0.33	50	50	ENSMUST00000118027.8	ENSMUSG00000029475.18	Kdm2b	chr5	protein_coding	lysine (K)-specific demethylase 2B
chr5	123125869	123127688	-	123125869	123126530	5pMXE	0.25	50	50	ENSMUST00000086200.11	ENSMUSG00000029475.18	Kdm2b	chr5	protein_coding	lysine (K)-specific demethylase 2B
chr5	123125869	123149866	-	123125869	123126530	5pMXE	0.25	50	50	ENSMUST00000086200.11	ENSMUSG00000029475.18	Kdm2b	chr5	protein_coding	lysine (K)-specific demethylase 2B
chr5	123125869	123149866	-	123125869	123127688	5pMXE	0.25	50	50	ENSMUST00000127403.8	ENSMUSG00000029475.18	Kdm2b	chr5	protein_coding	lysine (K)-specific demethylase 2B
chr5	123021525	123026593	-	123009960	123026593	A3SS	0.5	50	50	ENSMUST00000127403.8	ENSMUSG00000029475.18	Kdm2b	chr5	protein_coding	lysine (K)-specific demethylase 2B
chr5	123009960	123016498	-	123009960	123026593	A5SS	0.5	50	50	ENSMUST00000127403.8	ENSMUSG00000029475.18	Kdm2b	chr5	protein_coding	lysine (K)-specific demethylase 2B
chr5	123120886	123122911	-	123120886	123125725	A5SS	0.33	50	50	ENSMUST00000127403.8	ENSMUSG00000029475.18	Kdm2b	chr5	protein_coding	lysine (K)-specific demethylase 2B
chr5	123018915	123020027	-	123018915	123019083	5pMXE	0.5	50	50	ENSMUST00000139674.2	ENSMUSG00000029475.18	Kdm2b	chr5	protein_coding	lysine (K)-specific demethylase 2B
chr5	123019813	123020027	-	123018915	123020027	A3SS	0.33	50	50	ENSMUST00000152872.2	ENSMUSG00000029475.18	Kdm2b	chr5	protein_coding	lysine (K)-specific demethylase 2B
chr5	123087226	123091105	-	123087226	123090395	5pMXE	0.25	50	50	ENSMUST00000145082.2	ENSMUSG00000029475.18	Kdm2b	chr5	protein_coding	lysine (K)-specific demethylase 2B
chr5	123087226	123089797	-	123087226	123090395	A5SS	0.25	50	50	ENSMUST00000145082.2	ENSMUSG00000029475.18	Kdm2b	chr5	protein_coding	lysine (K)-specific demethylase 2B
chr5	123087226	123089797	-	123087226	123091105	A5SS	0.25	50	50	ENSMUST00000138929.8	ENSMUSG00000029475.18	Kdm2b	chr5	protein_coding	lysine (K)-specific demethylase 2B
chr5	123150071	123153058	-	123150071	123150878	5pMXE	0.5	50	50	ENSMUST00000172729.2	ENSMUSG00000105311.2	Gm44574	chr5	lncRNA	predicted gene 44574
chr5	123146122	123149866	-	123125869	123149866	A3SS	0.5	50	50	ENSMUST00000172729.2	ENSMUSG00000105311.2	Gm44574	chr5	lncRNA	predicted gene 44574
chr5	123154049	123167138	+	123153629	123167138	A5SS	0.5	50	50	ENSMUST00000051016.5	ENSMUSG00000049686.15	Orai1	chr5	protein_coding	ORAI calcium release-activated calcium modulator 1
chr5	123175423;123175923	123175739;123177320	-	123175423	123177320	cassetteExon	0.5	100	100	ENSMUST00000132775.8	ENSMUSG00000029477.15	Morn3	chr5	protein_coding	MORN repeat containing 3
chr5	123175423;123175923	123175739;123179146	-	123175423;123177479	123177320;123179146	MXE	0.5	100	100	ENSMUST00000132775.8	ENSMUSG00000029477.15	Morn3	chr5	protein_coding	MORN repeat containing 3
chr5	123174051	123175345	-	123174051	123175300	A5SS	0.5	50	50	ENSMUST00000132775.8	ENSMUSG00000029477.15	Morn3	chr5	protein_coding	MORN repeat containing 3
chr5	123175423	123177320	-	123175423	123175739	5pMXE	0.5	50	50	ENSMUST00000129934.2	ENSMUSG00000029477.15	Morn3	chr5	protein_coding	MORN repeat containing 3
chr5	123175923	123179146	-	123175923;123177479	123177320;123179146	ES	0.5	50	50	ENSMUST00000031437.14	ENSMUSG00000029477.15	Morn3	chr5	protein_coding	MORN repeat containing 3
chr5	123236356	123239688	+	123236356;123238016	123237900;123239688	ES	0.5	50	50	ENSMUST00000161660.8	ENSMUSG00000054434.15	Tmem120b	chr5	protein_coding	transmembrane protein 120B
chr5	123238016	123239674	+	123238016	123239688	A3SS	0.5	50	50	ENSMUST00000161660.8	ENSMUSG00000054434.15	Tmem120b	chr5	protein_coding	transmembrane protein 120B
chr5	123214558	123236238	+	123206566	123236238	A5SS	0.5	50	50	ENSMUST00000161660.8	ENSMUSG00000054434.15	Tmem120b	chr5	protein_coding	transmembrane protein 120B
chr5	123236356	123239688	+	123236356	123237900	A3SS&ES	0.33	50	50	ENSMUST00000161059.8	ENSMUSG00000054434.15	Tmem120b	chr5	protein_coding	transmembrane protein 120B
chr5	123236356	123237900	+	123236356	123252165	A3SS	0.33	50	50	ENSMUST00000160344.2	ENSMUSG00000054434.15	Tmem120b	chr5	protein_coding	transmembrane protein 120B
chr5	123236356	123239688	+	123236356	123252165	A3SS	0.33	50	50	ENSMUST00000160344.2	ENSMUSG00000054434.15	Tmem120b	chr5	protein_coding	transmembrane protein 120B
chr5	123242574	123252165	+	123236356	123252165	A5SS	0.5	50	50	ENSMUST00000160344.2	ENSMUSG00000054434.15	Tmem120b	chr5	protein_coding	transmembrane protein 120B
chr5	123236356	123239688	+	123238016	123239688	5pMXE	0.5	50	50	ENSMUST00000161049.2	ENSMUSG00000054434.15	Tmem120b	chr5	protein_coding	transmembrane protein 120B
chr5	123249294	123269930	-	123258683	123269930	A3SS&ES	0.5	50	50	ENSMUST00000186469.7	ENSMUSG00000029449.12	Rhof	chr5	protein_coding	ras homolog family member F (in filopodia)
chr5	123272493	123276018	-	123272493;123272780	123272687;123276018	ES	0.25	50	50	ENSMUST00000159072.2	ENSMUSG00000090086.8	AI480526	chr5	lncRNA	expressed sequence AI480526
chr5	123272955	123276018	-	123272780	123276018	A3SS	0.25	50	50	ENSMUST00000159072.2	ENSMUSG00000090086.8	AI480526	chr5	lncRNA	expressed sequence AI480526
chr5	123275517	123276018	-	123272780	123276018	A3SS	0.25	50	50	ENSMUST00000159072.2	ENSMUSG00000090086.8	AI480526	chr5	lncRNA	expressed sequence AI480526
chr5	123276129	123277782	-	123276129	123277030	5pMXE	0.33	50	50	ENSMUST00000160227.8	ENSMUSG00000090086.8	AI480526	chr5	lncRNA	expressed sequence AI480526
chr5	123276129	123277932	-	123276129	123277030	5pMXE	0.33	50	50	ENSMUST00000160227.8	ENSMUSG00000090086.8	AI480526	chr5	lncRNA	expressed sequence AI480526
chr5	123272493;123272955	123272687;123276018	-	123272493	123276018	cassetteExon	0.5	100	100	ENSMUST00000160227.8	ENSMUSG00000090086.8	AI480526	chr5	lncRNA	expressed sequence AI480526
chr5	123275517	123276018	-	123272493	123276018	A3SS	0.25	50	50	ENSMUST00000160227.8	ENSMUSG00000090086.8	AI480526	chr5	lncRNA	expressed sequence AI480526
chr5	123272493	123276018	-	123272955	123276018	3pMXE	0.25	50	50	ENSMUST00000160321.8	ENSMUSG00000090086.8	AI480526	chr5	lncRNA	expressed sequence AI480526
chr5	123276129;123277818	123277782;123277932	-	123276129	123277932	cassetteExon	0.5	100	100	ENSMUST00000160321.8	ENSMUSG00000090086.8	AI480526	chr5	lncRNA	expressed sequence AI480526
chr5	123275517	123276018	-	123272955	123276018	A3SS	0.25	50	50	ENSMUST00000160321.8	ENSMUSG00000090086.8	AI480526	chr5	lncRNA	expressed sequence AI480526
chr5	123295930	123296456	+	123295930	123296579	A3SS	0.5	50	50	ENSMUST00000174836.8	ENSMUSG00000038384.17	Setd1b	chr5	protein_coding	SET domain containing 1B
chr5	123366507	123372657	+	123326325	123372657	A5SS	0.5	50	50	ENSMUST00000199260.5	ENSMUSG00000029440.16	Psmd9	chr5	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 9
chr5	123379996	123384257	+	123379996	123381367	3pMXE	0.25	50	50	ENSMUST00000133386.2	ENSMUSG00000029440.16	Psmd9	chr5	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 9
chr5	123379996	123384260	+	123379996	123381367	3pMXE	0.25	50	50	ENSMUST00000133386.2	ENSMUSG00000029440.16	Psmd9	chr5	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 9
chr5	123379996	123386356	+	123379996	123381367	3pMXE	0.25	50	50	ENSMUST00000133386.2	ENSMUSG00000029440.16	Psmd9	chr5	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 9
chr5	123379996	123386356	+	123379996;123384345	123384257;123386356	ES	0.5	50	50	ENSMUST00000100729.9	ENSMUSG00000029440.16	Psmd9	chr5	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 9
chr5	123379996	123384260	+	123379996	123384257	A3SS	0.25	50	50	ENSMUST00000100729.9	ENSMUSG00000029440.16	Psmd9	chr5	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 9
chr5	123379996	123386356	+	123379996;123384345	123384260;123386356	ES	0.5	50	50	ENSMUST00000197809.2	ENSMUSG00000029440.16	Psmd9	chr5	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 9
chr5	123310349	123310798	-	123310349	123312414	A5SS	0.5	50	50	ENSMUST00000031398.14	ENSMUSG00000029445.14	Hpd	chr5	protein_coding	4-hydroxyphenylpyruvic acid dioxygenase
chr5	123319986	123320087	-	123319986	123320609	A5SS	0.5	50	50	ENSMUST00000031398.14	ENSMUSG00000029445.14	Hpd	chr5	protein_coding	4-hydroxyphenylpyruvic acid dioxygenase
chr5	123428129;123431934	123431853;123435484	+	123428129	123435484	cassetteExon	0.5	100	100	ENSMUST00000121964.8	ENSMUSG00000029442.19	Wdr66	chr5	protein_coding	WD repeat domain 66
chr5	123428129;123431983	123431853;123435484	+	123428129	123435484	cassetteExon	0.5	100	100	ENSMUST00000121964.8	ENSMUSG00000029442.19	Wdr66	chr5	protein_coding	WD repeat domain 66
chr5	123428129	123435484	+	123428129	123431853	3pMXE	0.5	50	50	ENSMUST00000170536.2	ENSMUSG00000029442.19	Wdr66	chr5	protein_coding	WD repeat domain 66
chr5	123431983	123435484	+	123431934	123435484	A5SS	0.33	50	50	ENSMUST00000197763.2	ENSMUSG00000029442.19	Wdr66	chr5	protein_coding	WD repeat domain 66
chr5	123428129	123435484	+	123431983	123435484	5pMXE	0.33	50	50	ENSMUST00000069311.5	ENSMUSG00000029442.19	Wdr66	chr5	protein_coding	WD repeat domain 66
chr5	123472643	123479570	-	123472643	123482328	A5SS	0.5	50	50	ENSMUST00000197262.2	ENSMUSG00000087336.3	Gm15860	chr5	lncRNA	predicted gene 15860
chr5	123482784	123489930	+	123482784;123485780	123485694;123489930	ES	0.5	50	50	ENSMUST00000120593.5	ENSMUSG00000029438.10	Bcl7a	chr5	protein_coding	B cell CLL/lymphoma 7A
chr5	123531905	123532787	-	123531905	123535755	A5SS	0.5	50	50	ENSMUST00000141216.2	ENSMUSG00000086700.3	Gm15747	chr5	lncRNA	predicted gene 15747
chr5	123588286	123590474	+	123588286	123588490	A3SS&ES	0.5	50	50	ENSMUST00000068237.12	ENSMUSG00000038342.16	Mlxip	chr5	protein_coding	MLX interacting protein
chr5	123589640	123590601	+	123588613	123590601	A5SS	0.5	50	50	ENSMUST00000068237.12	ENSMUSG00000038342.16	Mlxip	chr5	protein_coding	MLX interacting protein
chr5	123619916	123620412	-	123619916	123620097	5pMXE	0.33	50	50	ENSMUST00000031389.12	ENSMUSG00000029437.13	Il31	chr5	protein_coding	interleukin 31
chr5	123619916	123627489	-	123619916	123620097	5pMXE	0.33	50	50	ENSMUST00000031389.12	ENSMUSG00000029437.13	Il31	chr5	protein_coding	interleukin 31
chr5	123619916	123627489	-	123619916	123620412	5pMXE	0.33	50	50	ENSMUST00000198901.2	ENSMUSG00000029437.13	Il31	chr5	protein_coding	interleukin 31
chr5	123619916;123620317	123620097;123620412	-	123619916	123620412	cassetteExon	0.5	100	100	ENSMUST00000198901.2	ENSMUSG00000029437.13	Il31	chr5	protein_coding	interleukin 31
chr5	123619916	123620412	-	123620317	123620412	3pMXE	0.5	50	50	ENSMUST00000199227.2	ENSMUSG00000029437.13	Il31	chr5	protein_coding	interleukin 31
chr5	123641359	123641610	+	123641380	123641610	A5SS	0.5	50	50	ENSMUST00000196809.5	ENSMUSG00000063409.13	Lrrc43	chr5	protein_coding	leucine rich repeat containing 43
chr5	123642360	123646104	+	123642338	123646104	A5SS	0.5	50	50	ENSMUST00000196809.5	ENSMUSG00000063409.13	Lrrc43	chr5	protein_coding	leucine rich repeat containing 43
chr5	123654515	123655800	-	123650770	123655800	A3SS	0.5	50	50	ENSMUST00000125652.8	ENSMUSG00000029433.17	Diablo	chr5	protein_coding	diablo, IAP-binding mitochondrial protein
chr5	123662727	123663373	-	123662812	123663373	A3SS	0.5	50	50	ENSMUST00000197682.6	ENSMUSG00000114278.3	Gm49027	chr5	protein_coding	predicted gene, 49027
chr5	123707669;123708819	123708783;123708918	-	123707669	123708918	cassetteExon	0.5	100	100	ENSMUST00000031388.13	ENSMUSG00000029434.13	Vps33a	chr5	protein_coding	VPS33A CORVET/HOPS core subunit
chr5	123693073	123696677	-	123685191	123696677	A3SS	0.5	50	50	ENSMUST00000031388.13	ENSMUSG00000029434.13	Vps33a	chr5	protein_coding	VPS33A CORVET/HOPS core subunit
chr5	123761333	123768516	-	123761333;123765473	123765357;123768516	ES	0.5	50	50	ENSMUST00000111564.8	ENSMUSG00000049550.18	Clip1	chr5	protein_coding	CAP-GLY domain containing linker protein 1
chr5	123779944	123784146	-	123779944;123780679	123780482;123784146	ES	0.5	50	50	ENSMUST00000111564.8	ENSMUSG00000049550.18	Clip1	chr5	protein_coding	CAP-GLY domain containing linker protein 1
chr5	123718187;123719660	123719655;123720783	-	123718187	123720783	cassetteExon	0.5	100	100	ENSMUST00000111564.8	ENSMUSG00000049550.18	Clip1	chr5	protein_coding	CAP-GLY domain containing linker protein 1
chr5	123721701;123724417	123724397;123728856	-	123721701	123728856	cassetteExon	0.5	100	100	ENSMUST00000111564.8	ENSMUSG00000049550.18	Clip1	chr5	protein_coding	CAP-GLY domain containing linker protein 1
chr5	123769232;123773341	123773237;123778557	-	123769232	123778557	cassetteExon	0.5	100	100	ENSMUST00000111564.8	ENSMUSG00000049550.18	Clip1	chr5	protein_coding	CAP-GLY domain containing linker protein 1
chr5	123753398	123755399	-	123750001	123755399	A3SS	0.5	50	50	ENSMUST00000111564.8	ENSMUSG00000049550.18	Clip1	chr5	protein_coding	CAP-GLY domain containing linker protein 1
chr5	123777051	123778557	-	123769232	123778557	A3SS	0.33	50	50	ENSMUST00000111564.8	ENSMUSG00000049550.18	Clip1	chr5	protein_coding	CAP-GLY domain containing linker protein 1
chr5	123750001	123751131	-	123750001	123755399	A5SS	0.5	50	50	ENSMUST00000111564.8	ENSMUSG00000049550.18	Clip1	chr5	protein_coding	CAP-GLY domain containing linker protein 1
chr5	123765473	123768288	-	123765473	123768516	A5SS	0.5	50	50	ENSMUST00000111564.8	ENSMUSG00000049550.18	Clip1	chr5	protein_coding	CAP-GLY domain containing linker protein 1
chr5	123786028	123791595	-	123786028	123791515	A5SS	0.5	50	50	ENSMUST00000111564.8	ENSMUSG00000049550.18	Clip1	chr5	protein_coding	CAP-GLY domain containing linker protein 1
chr5	123794149	123804715	-	123794149	123822315	A5SS	0.5	50	50	ENSMUST00000111564.8	ENSMUSG00000049550.18	Clip1	chr5	protein_coding	CAP-GLY domain containing linker protein 1
chr5	123761333	123768516	-	123761333	123765357	A5SS&ES	0.5	50	50	ENSMUST00000111566.9	ENSMUSG00000049550.18	Clip1	chr5	protein_coding	CAP-GLY domain containing linker protein 1
chr5	123773341;123777051	123777019;123778557	-	123773341	123778557	cassetteExon	0.5	100	100	ENSMUST00000137363.8	ENSMUSG00000049550.18	Clip1	chr5	protein_coding	CAP-GLY domain containing linker protein 1
chr5	123750001	123755399	-	123750001;123753398	123751131;123755399	ES	0.5	50	50	ENSMUST00000154672.2	ENSMUSG00000049550.18	Clip1	chr5	protein_coding	CAP-GLY domain containing linker protein 1
chr5	123721701	123728856	-	123724417	123728856	3pMXE	0.5	50	50	ENSMUST00000133545.8	ENSMUSG00000049550.18	Clip1	chr5	protein_coding	CAP-GLY domain containing linker protein 1
chr5	123847548;123848866	123848750;123852129	-	123847548	123852129	cassetteExon	0.5	100	100	ENSMUST00000196282.5	ENSMUSG00000029427.12	Zcchc8	chr5	protein_coding	zinc finger, CCHC domain containing 8
chr5	123847548;123848870	123848750;123852129	-	123847548	123852129	cassetteExon	0.5	100	100	ENSMUST00000196282.5	ENSMUSG00000029427.12	Zcchc8	chr5	protein_coding	zinc finger, CCHC domain containing 8
chr5	123857588	123858786	-	123857597	123858786	A3SS	0.5	50	50	ENSMUST00000196282.5	ENSMUSG00000029427.12	Zcchc8	chr5	protein_coding	zinc finger, CCHC domain containing 8
chr5	123846695;123847548	123847258;123852129	-	123846695	123852129	cassetteExon	0.5	100	100	ENSMUST00000198826.5	ENSMUSG00000029427.12	Zcchc8	chr5	protein_coding	zinc finger, CCHC domain containing 8
chr5	123848866	123852129	-	123846695	123852129	A3SS	0.25	50	50	ENSMUST00000198826.5	ENSMUSG00000029427.12	Zcchc8	chr5	protein_coding	zinc finger, CCHC domain containing 8
chr5	123848870	123852129	-	123846695	123852129	A3SS	0.25	50	50	ENSMUST00000198826.5	ENSMUSG00000029427.12	Zcchc8	chr5	protein_coding	zinc finger, CCHC domain containing 8
chr5	123848870	123852129	-	123848866	123852129	A3SS	0.33	50	50	ENSMUST00000196333.5	ENSMUSG00000029427.12	Zcchc8	chr5	protein_coding	zinc finger, CCHC domain containing 8
chr5	123847548	123852129	-	123848870	123852129	3pMXE	0.25	50	50	ENSMUST00000196001.2	ENSMUSG00000029427.12	Zcchc8	chr5	protein_coding	zinc finger, CCHC domain containing 8
chr5	123878947	123881701	-	123878947;123880919	123880842;123881701	ES	0.33	50	50	ENSMUST00000050827.14	ENSMUSG00000029422.16	Rsrc2	chr5	protein_coding	arginine/serine-rich coiled-coil 2
chr5	123883174	123887352	-	123883174;123883652	123883560;123887352	ES	0.33	50	50	ENSMUST00000050827.14	ENSMUSG00000029422.16	Rsrc2	chr5	protein_coding	arginine/serine-rich coiled-coil 2
chr5	123871698;123872461	123872323;123874622	-	123871698	123874622	cassetteExon	0.5	100	100	ENSMUST00000050827.14	ENSMUSG00000029422.16	Rsrc2	chr5	protein_coding	arginine/serine-rich coiled-coil 2
chr5	123871698;123873959	123873885;123874622	-	123871698	123874622	cassetteExon	0.5	100	100	ENSMUST00000050827.14	ENSMUSG00000029422.16	Rsrc2	chr5	protein_coding	arginine/serine-rich coiled-coil 2
chr5	123883652;123884933	123884835;123887352	-	123883652	123887352	cassetteExon	0.5	100	100	ENSMUST00000050827.14	ENSMUSG00000029422.16	Rsrc2	chr5	protein_coding	arginine/serine-rich coiled-coil 2
chr5	123871693	123874622	-	123871698	123874622	A3SS	0.25	50	50	ENSMUST00000050827.14	ENSMUSG00000029422.16	Rsrc2	chr5	protein_coding	arginine/serine-rich coiled-coil 2
chr5	123878925	123880842	-	123878947	123880842	A3SS	0.5	50	50	ENSMUST00000050827.14	ENSMUSG00000029422.16	Rsrc2	chr5	protein_coding	arginine/serine-rich coiled-coil 2
chr5	123878925	123881701	-	123880919	123881701	A3SS&ES	0.33	50	50	ENSMUST00000050827.14	ENSMUSG00000029422.16	Rsrc2	chr5	protein_coding	arginine/serine-rich coiled-coil 2
chr5	123868607	123869102	-	123868607	123869100	A5SS	0.5	50	50	ENSMUST00000050827.14	ENSMUSG00000029422.16	Rsrc2	chr5	protein_coding	arginine/serine-rich coiled-coil 2
chr5	123884933	123887352	-	123883174	123887352	A3SS	0.33	50	50	ENSMUST00000057795.12	ENSMUSG00000029422.16	Rsrc2	chr5	protein_coding	arginine/serine-rich coiled-coil 2
chr5	123878925	123881701	-	123878925	123880842	5pMXE	0.5	50	50	ENSMUST00000182948.8	ENSMUSG00000029422.16	Rsrc2	chr5	protein_coding	arginine/serine-rich coiled-coil 2
chr5	123878925;123880919	123880842;123881701	-	123878925	123881701	cassetteExon	0.5	100	100	ENSMUST00000182955.8	ENSMUSG00000029422.16	Rsrc2	chr5	protein_coding	arginine/serine-rich coiled-coil 2
chr5	123878947	123881701	-	123878925	123881701	A3SS	0.33	50	50	ENSMUST00000182955.8	ENSMUSG00000029422.16	Rsrc2	chr5	protein_coding	arginine/serine-rich coiled-coil 2
chr5	123878947	123881701	-	123878947	123880842	5pMXE	0.5	50	50	ENSMUST00000182556.8	ENSMUSG00000029422.16	Rsrc2	chr5	protein_coding	arginine/serine-rich coiled-coil 2
chr5	123872461	123874622	-	123871693	123874622	A3SS	0.25	50	50	ENSMUST00000182556.8	ENSMUSG00000029422.16	Rsrc2	chr5	protein_coding	arginine/serine-rich coiled-coil 2
chr5	123873959	123874622	-	123871693	123874622	A3SS	0.25	50	50	ENSMUST00000182556.8	ENSMUSG00000029422.16	Rsrc2	chr5	protein_coding	arginine/serine-rich coiled-coil 2
chr5	123871698;123872461	123872323;123874622	-	123871698;123873959	123873885;123874622	MXE	0.5	100	100	ENSMUST00000182584.8	ENSMUSG00000029422.16	Rsrc2	chr5	protein_coding	arginine/serine-rich coiled-coil 2
chr5	123878947	123881701	-	123880919	123881701	A3SS&ES	0.33	50	50	ENSMUST00000183147.9	ENSMUSG00000029422.16	Rsrc2	chr5	protein_coding	arginine/serine-rich coiled-coil 2
chr5	123883174	123887352	-	123883174	123883560	5pMXE	0.5	50	50	ENSMUST00000182744.8	ENSMUSG00000029422.16	Rsrc2	chr5	protein_coding	arginine/serine-rich coiled-coil 2
chr5	123953092	123956514	+	123953092;123954859	123954730;123956514	ES	0.5	50	50	ENSMUST00000031366.12	ENSMUSG00000029414.12	Kntc1	chr5	protein_coding	kinetochore associated 1
chr5	123910887	123912000	+	123910210	123912000	A5SS	0.5	50	50	ENSMUST00000031366.12	ENSMUSG00000029414.12	Kntc1	chr5	protein_coding	kinetochore associated 1
chr5	124046277	124046447	+	124046277	124053254	A3SS	0.5	50	50	ENSMUST00000023869.15	ENSMUSG00000023106.16	Denr	chr5	protein_coding	density-regulated protein
chr5	124045765	124046163	+	124045429	124046163	A5SS	0.5	50	50	ENSMUST00000023869.15	ENSMUSG00000023106.16	Denr	chr5	protein_coding	density-regulated protein
chr5	124068923	124072135	+	124065531	124072135	A5SS	0.5	50	50	ENSMUST00000166129.5	ENSMUSG00000105875.2	Gm43518	chr5	protein_coding	predicted gene 43518
chr5	124089350	124089864	+	124089350	124089815	A3SS	0.5	50	50	ENSMUST00000094320.10	ENSMUSG00000061882.13	Ccdc62	chr5	protein_coding	coiled-coil domain containing 62
chr5	124089930	124092347	+	124089930	124092120	A3SS	0.5	50	50	ENSMUST00000094320.10	ENSMUSG00000061882.13	Ccdc62	chr5	protein_coding	coiled-coil domain containing 62
chr5	124104991	124106194	+	124104991	124106200	A3SS	0.5	50	50	ENSMUST00000094320.10	ENSMUSG00000061882.13	Ccdc62	chr5	protein_coding	coiled-coil domain containing 62
chr5	124134434	124134539	+	124134434	124134583	A3SS	0.5	50	50	ENSMUST00000000939.15	ENSMUSG00000000915.16	Hip1r	chr5	protein_coding	huntingtin interacting protein 1 related
chr5	124118418	124127368	+	124111918	124127368	A5SS	0.5	50	50	ENSMUST00000000939.15	ENSMUSG00000000915.16	Hip1r	chr5	protein_coding	huntingtin interacting protein 1 related
chr5	124139153	124139269	+	124139155	124139269	A5SS	0.5	50	50	ENSMUST00000000939.15	ENSMUSG00000000915.16	Hip1r	chr5	protein_coding	huntingtin interacting protein 1 related
chr5	124166028	124170165	-	124148922	124170165	A3SS	0.5	50	50	ENSMUST00000040967.9	ENSMUSG00000066278.7	Vps37b	chr5	protein_coding	vacuolar protein sorting 37B
chr5	124148922	124149713	-	124148922	124170165	A5SS	0.5	50	50	ENSMUST00000040967.9	ENSMUSG00000066278.7	Vps37b	chr5	protein_coding	vacuolar protein sorting 37B
chr5	124214258	124216848	-	124214258;124215371	124215183;124216848	ES	0.5	50	50	ENSMUST00000031354.11	ENSMUSG00000029408.14	Abcb9	chr5	protein_coding	ATP-binding cassette, sub-family B (MDR/TAP), member 9
chr5	124214228	124215183	-	124214258	124215183	A3SS	0.5	50	50	ENSMUST00000031354.11	ENSMUSG00000029408.14	Abcb9	chr5	protein_coding	ATP-binding cassette, sub-family B (MDR/TAP), member 9
chr5	124220087	124221115	-	124220208	124221115	A3SS	0.5	50	50	ENSMUST00000031354.11	ENSMUSG00000029408.14	Abcb9	chr5	protein_coding	ATP-binding cassette, sub-family B (MDR/TAP), member 9
chr5	124221231	124221669	-	124221245	124221669	A3SS	0.5	50	50	ENSMUST00000031354.11	ENSMUSG00000029408.14	Abcb9	chr5	protein_coding	ATP-binding cassette, sub-family B (MDR/TAP), member 9
chr5	124216976	124217819	-	124216976	124218096	A5SS	0.5	50	50	ENSMUST00000031354.11	ENSMUSG00000029408.14	Abcb9	chr5	protein_coding	ATP-binding cassette, sub-family B (MDR/TAP), member 9
chr5	124214258	124216848	-	124215371	124216848	A3SS&ES	0.5	50	50	ENSMUST00000148392.2	ENSMUSG00000029408.14	Abcb9	chr5	protein_coding	ATP-binding cassette, sub-family B (MDR/TAP), member 9
chr5	124251591	124252451	+	124251591;124252255	124252128;124252451	ES	0.5	50	50	ENSMUST00000024470.13	ENSMUSG00000023707.14	Ogfod2	chr5	protein_coding	2-oxoglutarate and iron-dependent oxygenase domain containing 2
chr5	124251591	124252470	+	124251591	124252128	A3SS&ES	0.25	50	50	ENSMUST00000024470.13	ENSMUSG00000023707.14	Ogfod2	chr5	protein_coding	2-oxoglutarate and iron-dependent oxygenase domain containing 2
chr5	124251591	124252542	+	124251591	124252128	A3SS&ES	0.25	50	50	ENSMUST00000024470.13	ENSMUSG00000023707.14	Ogfod2	chr5	protein_coding	2-oxoglutarate and iron-dependent oxygenase domain containing 2
chr5	124252255	124252542	+	124252255	124252451	A3SS	0.5	50	50	ENSMUST00000024470.13	ENSMUSG00000023707.14	Ogfod2	chr5	protein_coding	2-oxoglutarate and iron-dependent oxygenase domain containing 2
chr5	124251591	124252451	+	124251591	124252128	A3SS	0.25	50	50	ENSMUST00000130140.8	ENSMUSG00000023707.14	Ogfod2	chr5	protein_coding	2-oxoglutarate and iron-dependent oxygenase domain containing 2
chr5	124251591	124252542	+	124251591;124252255	124252128;124252542	ES	0.5	50	50	ENSMUST00000119269.6	ENSMUSG00000023707.14	Ogfod2	chr5	protein_coding	2-oxoglutarate and iron-dependent oxygenase domain containing 2
chr5	124251591	124252470	+	124251591	124252451	A3SS	0.25	50	50	ENSMUST00000196627.5	ENSMUSG00000023707.14	Ogfod2	chr5	protein_coding	2-oxoglutarate and iron-dependent oxygenase domain containing 2
chr5	124251591	124252542	+	124251591	124252451	A3SS	0.25	50	50	ENSMUST00000196627.5	ENSMUSG00000023707.14	Ogfod2	chr5	protein_coding	2-oxoglutarate and iron-dependent oxygenase domain containing 2
chr5	124251591	124252542	+	124251591	124252470	3pMXE	0.25	50	50	ENSMUST00000199457.5	ENSMUSG00000023707.14	Ogfod2	chr5	protein_coding	2-oxoglutarate and iron-dependent oxygenase domain containing 2
chr5	124254587	124254978	+	124254674	124254978	A5SS	0.5	50	50	ENSMUST00000149835.2	ENSMUSG00000029404.16	Arl6ip4	chr5	protein_coding	ADP-ribosylation factor-like 6 interacting protein 4
chr5	124262150;124263022	124262861;124263362	-	124262150	124263362	cassetteExon	0.5	100	100	ENSMUST00000086123.11	ENSMUSG00000029406.16	Pitpnm2	chr5	protein_coding	phosphatidylinositol transfer protein, membrane-associated 2
chr5	124263526;124264567	124264418;124265240	-	124263526	124265240	cassetteExon	0.5	100	100	ENSMUST00000086123.11	ENSMUSG00000029406.16	Pitpnm2	chr5	protein_coding	phosphatidylinositol transfer protein, membrane-associated 2
chr5	124271038	124271231	-	124269405	124271231	A3SS	0.5	50	50	ENSMUST00000086123.11	ENSMUSG00000029406.16	Pitpnm2	chr5	protein_coding	phosphatidylinositol transfer protein, membrane-associated 2
chr5	124290782	124322996	-	124290782	124354379	A5SS	0.25	50	50	ENSMUST00000086123.11	ENSMUSG00000029406.16	Pitpnm2	chr5	protein_coding	phosphatidylinositol transfer protein, membrane-associated 2
chr5	124290782	124325002	-	124290782	124354379	A5SS	0.25	50	50	ENSMUST00000086123.11	ENSMUSG00000029406.16	Pitpnm2	chr5	protein_coding	phosphatidylinositol transfer protein, membrane-associated 2
chr5	124290782	124327605	-	124290782	124354379	A5SS	0.25	50	50	ENSMUST00000086123.11	ENSMUSG00000029406.16	Pitpnm2	chr5	protein_coding	phosphatidylinositol transfer protein, membrane-associated 2
chr5	124290782	124327605	-	124290782	124325002	5pMXE	0.25	50	50	ENSMUST00000161938.8	ENSMUSG00000029406.16	Pitpnm2	chr5	protein_coding	phosphatidylinositol transfer protein, membrane-associated 2
chr5	124290782	124322996	-	124290782	124325002	A5SS	0.25	50	50	ENSMUST00000161938.8	ENSMUSG00000029406.16	Pitpnm2	chr5	protein_coding	phosphatidylinositol transfer protein, membrane-associated 2
chr5	124263526	124265240	-	124263526	124264418	5pMXE	0.5	50	50	ENSMUST00000159010.2	ENSMUSG00000029406.16	Pitpnm2	chr5	protein_coding	phosphatidylinositol transfer protein, membrane-associated 2
chr5	124290782	124322996	-	124290782	124327605	A5SS	0.25	50	50	ENSMUST00000159677.8	ENSMUSG00000029406.16	Pitpnm2	chr5	protein_coding	phosphatidylinositol transfer protein, membrane-associated 2
chr5	124333054	124336807	+	124333054	124333148	3pMXE	0.5	50	50	ENSMUST00000159053.2	ENSMUSG00000089842.3	Pitpnm2os2	chr5	lncRNA	phosphatidylinositol transfer protein, membrane-associated 2, opposite strand 2
chr5	124453959;124454234	124454145;124458908	-	124453959	124458908	cassetteExon	0.5	100	100	ENSMUST00000031344.13	ENSMUSG00000038126.18	Mphosph9	chr5	protein_coding	M-phase phosphoprotein 9
chr5	124453959;124454234	124454145;124462937	-	124453959;124459061	124458908;124462937	MXE	0.5	100	100	ENSMUST00000031344.13	ENSMUSG00000038126.18	Mphosph9	chr5	protein_coding	M-phase phosphoprotein 9
chr5	124398232	124398998	-	124398278	124398998	A3SS	0.5	50	50	ENSMUST00000031344.13	ENSMUSG00000038126.18	Mphosph9	chr5	protein_coding	M-phase phosphoprotein 9
chr5	124399072	124399985	-	124399098	124399985	A3SS	0.5	50	50	ENSMUST00000031344.13	ENSMUSG00000038126.18	Mphosph9	chr5	protein_coding	M-phase phosphoprotein 9
chr5	124453349	124453436	-	124450894	124453436	A3SS	0.5	50	50	ENSMUST00000031344.13	ENSMUSG00000038126.18	Mphosph9	chr5	protein_coding	M-phase phosphoprotein 9
chr5	124459017	124462937	-	124459061	124462937	A3SS	0.33	50	50	ENSMUST00000031344.13	ENSMUSG00000038126.18	Mphosph9	chr5	protein_coding	M-phase phosphoprotein 9
chr5	124454234	124462937	-	124454234;124459017	124458908;124462937	ES	0.33	50	50	ENSMUST00000147737.8	ENSMUSG00000038126.18	Mphosph9	chr5	protein_coding	M-phase phosphoprotein 9
chr5	124454234	124462937	-	124454234;124459061	124458908;124462937	ES	0.33	50	50	ENSMUST00000184951.8	ENSMUSG00000038126.18	Mphosph9	chr5	protein_coding	M-phase phosphoprotein 9
chr5	124453959;124459017	124458908;124462937	-	124453959;124454234	124454145;124462937	MXE	0.5	100	100	ENSMUST00000130502.8	ENSMUSG00000038126.18	Mphosph9	chr5	protein_coding	M-phase phosphoprotein 9
chr5	124488235	124501013	-	124488235	124492380	5pMXE	0.25	50	50	ENSMUST00000031341.11	ENSMUSG00000029394.12	Cdk2ap1	chr5	protein_coding	CDK2 (cyclin-dependent kinase 2)-associated protein 1
chr5	124488235	124489204	-	124488235	124492380	A5SS	0.25	50	50	ENSMUST00000031341.11	ENSMUSG00000029394.12	Cdk2ap1	chr5	protein_coding	CDK2 (cyclin-dependent kinase 2)-associated protein 1
chr5	124488235	124490263	-	124488235	124492380	A5SS	0.25	50	50	ENSMUST00000031341.11	ENSMUSG00000029394.12	Cdk2ap1	chr5	protein_coding	CDK2 (cyclin-dependent kinase 2)-associated protein 1
chr5	124488235	124490263	-	124488235	124489204	5pMXE	0.25	50	50	ENSMUST00000111474.8	ENSMUSG00000029394.12	Cdk2ap1	chr5	protein_coding	CDK2 (cyclin-dependent kinase 2)-associated protein 1
chr5	124488235	124501013	-	124488235	124489204	5pMXE	0.25	50	50	ENSMUST00000111474.8	ENSMUSG00000029394.12	Cdk2ap1	chr5	protein_coding	CDK2 (cyclin-dependent kinase 2)-associated protein 1
chr5	124488235	124501013	-	124488235	124490263	5pMXE	0.25	50	50	ENSMUST00000111472.6	ENSMUSG00000029394.12	Cdk2ap1	chr5	protein_coding	CDK2 (cyclin-dependent kinase 2)-associated protein 1
chr5	124548445	124552462	-	124548445;124551352	124551248;124552462	ES	0.33	50	50	ENSMUST00000065263.12	ENSMUSG00000038095.16	Sbno1	chr5	protein_coding	strawberry notch 1
chr5	124548442	124551248	-	124548445	124551248	A3SS	0.5	50	50	ENSMUST00000065263.12	ENSMUSG00000038095.16	Sbno1	chr5	protein_coding	strawberry notch 1
chr5	124548442	124552462	-	124551352	124552462	A3SS&ES	0.33	50	50	ENSMUST00000065263.12	ENSMUSG00000038095.16	Sbno1	chr5	protein_coding	strawberry notch 1
chr5	124552590	124557874	-	124552590	124563910	A5SS	0.33	50	50	ENSMUST00000065263.12	ENSMUSG00000038095.16	Sbno1	chr5	protein_coding	strawberry notch 1
chr5	124552590	124563510	-	124552590	124563910	A5SS	0.33	50	50	ENSMUST00000065263.12	ENSMUSG00000038095.16	Sbno1	chr5	protein_coding	strawberry notch 1
chr5	124552590;124557950	124557874;124563510	-	124552590	124563510	cassetteExon	0.5	100	100	ENSMUST00000199808.5	ENSMUSG00000038095.16	Sbno1	chr5	protein_coding	strawberry notch 1
chr5	124548442	124552462	-	124548442;124551352	124551248;124552462	ES	0.33	50	50	ENSMUST00000168651.6	ENSMUSG00000038095.16	Sbno1	chr5	protein_coding	strawberry notch 1
chr5	124548445	124552462	-	124551352	124552462	A3SS&ES	0.33	50	50	ENSMUST00000168651.6	ENSMUSG00000038095.16	Sbno1	chr5	protein_coding	strawberry notch 1
chr5	124548445	124552462	-	124548442	124552462	A3SS	0.33	50	50	ENSMUST00000200474.5	ENSMUSG00000038095.16	Sbno1	chr5	protein_coding	strawberry notch 1
chr5	124552590	124563510	-	124552590	124557874	5pMXE	0.33	50	50	ENSMUST00000197777.2	ENSMUSG00000038095.16	Sbno1	chr5	protein_coding	strawberry notch 1
chr5	124578078	124585277	+	124578078;124584147	124584032;124585277	ES	0.16	50	50	ENSMUST00000059580.11	ENSMUSG00000049327.18	Kmt5a	chr5	protein_coding	lysine methyltransferase 5A
chr5	124583791	124584032	+	124578078	124584032	A5SS	0.5	50	50	ENSMUST00000059580.11	ENSMUSG00000049327.18	Kmt5a	chr5	protein_coding	lysine methyltransferase 5A
chr5	124583791	124585277	+	124584147	124585277	A5SS&ES	0.16	50	50	ENSMUST00000059580.11	ENSMUSG00000049327.18	Kmt5a	chr5	protein_coding	lysine methyltransferase 5A
chr5	124584972	124585277	+	124584147	124585277	A5SS	0.16	50	50	ENSMUST00000059580.11	ENSMUSG00000049327.18	Kmt5a	chr5	protein_coding	lysine methyltransferase 5A
chr5	124585067	124585277	+	124584147	124585277	A5SS	0.16	50	50	ENSMUST00000059580.11	ENSMUSG00000049327.18	Kmt5a	chr5	protein_coding	lysine methyltransferase 5A
chr5	124585156	124585277	+	124584147	124585277	A5SS	0.16	50	50	ENSMUST00000059580.11	ENSMUSG00000049327.18	Kmt5a	chr5	protein_coding	lysine methyltransferase 5A
chr5	124588395	124588724	+	124585433	124588724	A5SS	0.5	50	50	ENSMUST00000059580.11	ENSMUSG00000049327.18	Kmt5a	chr5	protein_coding	lysine methyltransferase 5A
chr5	124583791	124585277	+	124578078	124585277	A5SS	0.16	50	50	ENSMUST00000199798.5	ENSMUSG00000049327.18	Kmt5a	chr5	protein_coding	lysine methyltransferase 5A
chr5	124584972	124585277	+	124578078	124585277	A5SS	0.16	50	50	ENSMUST00000199798.5	ENSMUSG00000049327.18	Kmt5a	chr5	protein_coding	lysine methyltransferase 5A
chr5	124585067	124585277	+	124578078	124585277	A5SS	0.16	50	50	ENSMUST00000199798.5	ENSMUSG00000049327.18	Kmt5a	chr5	protein_coding	lysine methyltransferase 5A
chr5	124585156	124585277	+	124578078	124585277	A5SS	0.16	50	50	ENSMUST00000199798.5	ENSMUSG00000049327.18	Kmt5a	chr5	protein_coding	lysine methyltransferase 5A
chr5	124583791;124584147	124584032;124585277	+	124583791	124585277	cassetteExon	0.5	100	100	ENSMUST00000100709.7	ENSMUSG00000049327.18	Kmt5a	chr5	protein_coding	lysine methyltransferase 5A
chr5	124584972	124585277	+	124583791	124585277	A5SS	0.16	50	50	ENSMUST00000100709.7	ENSMUSG00000049327.18	Kmt5a	chr5	protein_coding	lysine methyltransferase 5A
chr5	124585067	124585277	+	124583791	124585277	A5SS	0.16	50	50	ENSMUST00000100709.7	ENSMUSG00000049327.18	Kmt5a	chr5	protein_coding	lysine methyltransferase 5A
chr5	124585156	124585277	+	124583791	124585277	A5SS	0.16	50	50	ENSMUST00000100709.7	ENSMUSG00000049327.18	Kmt5a	chr5	protein_coding	lysine methyltransferase 5A
chr5	124578078	124585277	+	124584147	124585277	5pMXE	0.16	50	50	ENSMUST00000134826.8	ENSMUSG00000049327.18	Kmt5a	chr5	protein_coding	lysine methyltransferase 5A
chr5	124585067	124585277	+	124584972	124585277	A5SS	0.16	50	50	ENSMUST00000138766.8	ENSMUSG00000049327.18	Kmt5a	chr5	protein_coding	lysine methyltransferase 5A
chr5	124585156	124585277	+	124584972	124585277	A5SS	0.16	50	50	ENSMUST00000138766.8	ENSMUSG00000049327.18	Kmt5a	chr5	protein_coding	lysine methyltransferase 5A
chr5	124585156	124585277	+	124585067	124585277	A5SS	0.16	50	50	ENSMUST00000154031.8	ENSMUSG00000049327.18	Kmt5a	chr5	protein_coding	lysine methyltransferase 5A
chr5	124621345	124628186	+	124621309	124628186	A5SS	0.33	50	50	ENSMUST00000031349.9	ENSMUSG00000029402.9	Snrnp35	chr5	protein_coding	small nuclear ribonucleoprotein 35 (U11/U12)
chr5	124621716	124628186	+	124621309	124628186	A5SS	0.33	50	50	ENSMUST00000031349.9	ENSMUSG00000029402.9	Snrnp35	chr5	protein_coding	small nuclear ribonucleoprotein 35 (U11/U12)
chr5	124621716	124628186	+	124621345	124628186	A5SS	0.33	50	50	ENSMUST00000136567.2	ENSMUSG00000029402.9	Snrnp35	chr5	protein_coding	small nuclear ribonucleoprotein 35 (U11/U12)
chr5	124631907;124633985	124633962;124639903	-	124631907	124639903	cassetteExon	0.5	100	100	ENSMUST00000062153.12	ENSMUSG00000029392.13	Rilpl1	chr5	protein_coding	Rab interacting lysosomal protein-like 1
chr5	124631907;124634333	124633962;124639903	-	124631907	124639903	cassetteExon	0.5	100	100	ENSMUST00000062153.12	ENSMUSG00000029392.13	Rilpl1	chr5	protein_coding	Rab interacting lysosomal protein-like 1
chr5	124631907;124634333	124634246;124639903	-	124631907	124639903	cassetteExon	0.5	100	100	ENSMUST00000062153.12	ENSMUSG00000029392.13	Rilpl1	chr5	protein_coding	Rab interacting lysosomal protein-like 1
chr5	124641796	124641933	-	124641796	124652582	A5SS	0.5	50	50	ENSMUST00000062153.12	ENSMUSG00000029392.13	Rilpl1	chr5	protein_coding	Rab interacting lysosomal protein-like 1
chr5	124631907;124634333	124634246;124639903	-	124631907;124633985	124633962;124639903	MXE	0.5	100	100	ENSMUST00000199766.5	ENSMUSG00000029392.13	Rilpl1	chr5	protein_coding	Rab interacting lysosomal protein-like 1
chr5	124681227;124681570	124681550;124684959	+	124681227	124684959	cassetteExon	0.5	100	100	ENSMUST00000060226.11	ENSMUSG00000029390.14	Tmed2	chr5	protein_coding	transmembrane p24 trafficking protein 2
chr5	124679495	124681035	+	124679104	124681035	A5SS	0.5	50	50	ENSMUST00000060226.11	ENSMUSG00000029390.14	Tmed2	chr5	protein_coding	transmembrane p24 trafficking protein 2
chr5	124700745	124704177	+	124700745	124704444	A3SS	0.5	50	50	ENSMUST00000071057.14	ENSMUSG00000029389.18	Ddx55	chr5	protein_coding	DEAD box helicase 55
chr5	124704558	124704909	+	124704558	124704897	A3SS	0.5	50	50	ENSMUST00000071057.14	ENSMUSG00000029389.18	Ddx55	chr5	protein_coding	DEAD box helicase 55
chr5	124692705	124697191	+	124696234	124697191	A5SS&ES	0.33	50	50	ENSMUST00000071057.14	ENSMUSG00000029389.18	Ddx55	chr5	protein_coding	DEAD box helicase 55
chr5	124692820	124697191	+	124696234	124697191	A5SS&ES	0.33	50	50	ENSMUST00000131631.8	ENSMUSG00000029389.18	Ddx55	chr5	protein_coding	DEAD box helicase 55
chr5	124692820	124697191	+	124692705	124697191	A5SS	0.33	50	50	ENSMUST00000136067.8	ENSMUSG00000029389.18	Ddx55	chr5	protein_coding	DEAD box helicase 55
chr5	124692820	124694820	+	124692820	124697191	A3SS	0.5	50	50	ENSMUST00000144433.2	ENSMUSG00000029389.18	Ddx55	chr5	protein_coding	DEAD box helicase 55
chr5	124714977	124716500	-	124714977;124715215	124715079;124716500	ES	0.5	50	50	ENSMUST00000031334.15	ENSMUSG00000029388.15	Eif2b1	chr5	protein_coding	eukaryotic translation initiation factor 2B, subunit 1 (alpha)
chr5	124711868	124712661	-	124711817	124712661	A3SS	0.5	50	50	ENSMUST00000031334.15	ENSMUSG00000029388.15	Eif2b1	chr5	protein_coding	eukaryotic translation initiation factor 2B, subunit 1 (alpha)
chr5	124716601	124716767	-	124716601	124717064	A5SS	0.33	50	50	ENSMUST00000031334.15	ENSMUSG00000029388.15	Eif2b1	chr5	protein_coding	eukaryotic translation initiation factor 2B, subunit 1 (alpha)
chr5	124716601	124716775	-	124716601	124717064	A5SS	0.33	50	50	ENSMUST00000031334.15	ENSMUSG00000029388.15	Eif2b1	chr5	protein_coding	eukaryotic translation initiation factor 2B, subunit 1 (alpha)
chr5	124716601	124716767	-	124716601	124716775	A5SS	0.33	50	50	ENSMUST00000128920.2	ENSMUSG00000029388.15	Eif2b1	chr5	protein_coding	eukaryotic translation initiation factor 2B, subunit 1 (alpha)
chr5	124767355	124770818	+	124766765	124770818	A5SS	0.5	50	50	ENSMUST00000200292.5	ENSMUSG00000038023.13	Atp6v0a2	chr5	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit A2
chr5	124777221;124779308	124779042;124779408	+	124777221	124779408	cassetteExon	0.5	100	100	ENSMUST00000037865.13	ENSMUSG00000038023.13	Atp6v0a2	chr5	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit A2
chr5	124791296	124793552	+	124791296	124793369	A3SS	0.5	50	50	ENSMUST00000037865.13	ENSMUSG00000038023.13	Atp6v0a2	chr5	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit A2
chr5	124797086	124798767	+	124797086	124798762	A3SS	0.5	50	50	ENSMUST00000037865.13	ENSMUSG00000038023.13	Atp6v0a2	chr5	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit A2
chr5	124795395	124795503	+	124795069	124795503	A5SS	0.5	50	50	ENSMUST00000037865.13	ENSMUSG00000038023.13	Atp6v0a2	chr5	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit A2
chr5	124799553;124800763	124800594;124802080	-	124799553	124802080	cassetteExon	0.5	100	100	ENSMUST00000199971.5	ENSMUSG00000106082.5	4930404A12Rik	chr5	lncRNA	RIKEN cDNA 4930404A12 gene
chr5	124823801;124824837	124824667;124825455	+	124823801	124825455	cassetteExon	0.5	100	100	ENSMUST00000141137.7	ENSMUSG00000038011.16	Dnah10	chr5	protein_coding	dynein, axonemal, heavy chain 10
chr5	124871506	124873262	+	124871506	124873305	A3SS	0.5	50	50	ENSMUST00000141137.7	ENSMUSG00000038011.16	Dnah10	chr5	protein_coding	dynein, axonemal, heavy chain 10
chr5	124913355;124913630	124913544;124916007	-	124913355	124916007	cassetteExon	0.5	100	100	ENSMUST00000036206.14	ENSMUSG00000037979.14	Ccdc92	chr5	protein_coding	coiled-coil domain containing 92
chr5	124916871	124928614	-	124916871	124939079	A5SS	0.33	50	50	ENSMUST00000036206.14	ENSMUSG00000037979.14	Ccdc92	chr5	protein_coding	coiled-coil domain containing 92
chr5	124916871	124938813	-	124916871	124939079	A5SS	0.33	50	50	ENSMUST00000036206.14	ENSMUSG00000037979.14	Ccdc92	chr5	protein_coding	coiled-coil domain containing 92
chr5	124916871	124928614	-	124916871	124938813	A5SS	0.33	50	50	ENSMUST00000135495.8	ENSMUSG00000037979.14	Ccdc92	chr5	protein_coding	coiled-coil domain containing 92
chr5	124961836	124978326	+	124961836	124962015	3pMXE	0.5	50	50	ENSMUST00000111417.9	ENSMUSG00000079215.9	Zfp664	chr5	protein_coding	zinc finger protein 664
chr5	124940125	124940418	+	124939946	124940418	A5SS	0.5	50	50	ENSMUST00000111417.9	ENSMUSG00000079215.9	Zfp664	chr5	protein_coding	zinc finger protein 664
chr5	124953076	124961772	+	124940572	124961772	A5SS	0.5	50	50	ENSMUST00000111417.9	ENSMUSG00000079215.9	Zfp664	chr5	protein_coding	zinc finger protein 664
chr5	125096054	125099935	-	125096054;125097110	125096883;125099935	ES	0.5	50	50	ENSMUST00000125053.8	ENSMUSG00000029478.17	Ncor2	chr5	protein_coding	nuclear receptor co-repressor 2
chr5	125113982	125114338	-	125113982;125114230	125114126;125114338	ES	0.5	50	50	ENSMUST00000125053.8	ENSMUSG00000029478.17	Ncor2	chr5	protein_coding	nuclear receptor co-repressor 2
chr5	125114440	125114925	-	125114443	125114925	A3SS	0.5	50	50	ENSMUST00000125053.8	ENSMUSG00000029478.17	Ncor2	chr5	protein_coding	nuclear receptor co-repressor 2
chr5	125119031	125119809	-	125119028	125119809	A3SS	0.5	50	50	ENSMUST00000125053.8	ENSMUSG00000029478.17	Ncor2	chr5	protein_coding	nuclear receptor co-repressor 2
chr5	125096054	125097024	-	125096054	125096883	A5SS	0.33	50	50	ENSMUST00000125053.8	ENSMUSG00000029478.17	Ncor2	chr5	protein_coding	nuclear receptor co-repressor 2
chr5	125102868	125103752	-	125102868	125103866	A5SS	0.5	50	50	ENSMUST00000125053.8	ENSMUSG00000029478.17	Ncor2	chr5	protein_coding	nuclear receptor co-repressor 2
chr5	125104281	125105676	-	125104281	125105685	A5SS	0.5	50	50	ENSMUST00000125053.8	ENSMUSG00000029478.17	Ncor2	chr5	protein_coding	nuclear receptor co-repressor 2
chr5	125196673;125230716	125230671;125256061	-	125196673;125202044	125201834;125256061	MXE	0.5	100	100	ENSMUST00000111402.9	ENSMUSG00000029478.17	Ncor2	chr5	protein_coding	nuclear receptor co-repressor 2
chr5	125202044;125230716	125230671;125256061	-	125202044	125256061	cassetteExon	0.5	100	100	ENSMUST00000111402.9	ENSMUSG00000029478.17	Ncor2	chr5	protein_coding	nuclear receptor co-repressor 2
chr5	125128182	125132797	-	125128122	125132797	A3SS	0.5	50	50	ENSMUST00000111402.9	ENSMUSG00000029478.17	Ncor2	chr5	protein_coding	nuclear receptor co-repressor 2
chr5	125132939	125134906	-	125132939	125142904	A5SS	0.5	50	50	ENSMUST00000111402.9	ENSMUSG00000029478.17	Ncor2	chr5	protein_coding	nuclear receptor co-repressor 2
chr5	125196673	125230671	-	125196673;125202044	125201834;125230671	ES	0.5	50	50	ENSMUST00000111398.8	ENSMUSG00000029478.17	Ncor2	chr5	protein_coding	nuclear receptor co-repressor 2
chr5	125175063;125202044	125201834;125230671	-	125175063;125196673	125179707;125230671	MXE	0.5	100	100	ENSMUST00000111393.8	ENSMUSG00000029478.17	Ncor2	chr5	protein_coding	nuclear receptor co-repressor 2
chr5	125175063;125202044	125201834;125256061	-	125175063;125230716	125179707;125256061	MXE	0.5	100	100	ENSMUST00000111393.8	ENSMUSG00000029478.17	Ncor2	chr5	protein_coding	nuclear receptor co-repressor 2
chr5	125196673	125230671	-	125196673	125201834	5pMXE	0.5	50	50	ENSMUST00000055256.14	ENSMUSG00000029478.17	Ncor2	chr5	protein_coding	nuclear receptor co-repressor 2
chr5	125196673	125201834	-	125175063	125201834	A3SS	0.5	50	50	ENSMUST00000111394.8	ENSMUSG00000029478.17	Ncor2	chr5	protein_coding	nuclear receptor co-repressor 2
chr5	125196673	125230671	-	125202044	125230671	A3SS&ES	0.5	50	50	ENSMUST00000111394.8	ENSMUSG00000029478.17	Ncor2	chr5	protein_coding	nuclear receptor co-repressor 2
chr5	125175063	125179707	-	125175063	125201834	A5SS	0.5	50	50	ENSMUST00000111394.8	ENSMUSG00000029478.17	Ncor2	chr5	protein_coding	nuclear receptor co-repressor 2
chr5	125096054;125097110	125097024;125099935	-	125096054	125099935	cassetteExon	0.5	100	100	ENSMUST00000138890.3	ENSMUSG00000029478.17	Ncor2	chr5	protein_coding	nuclear receptor co-repressor 2
chr5	125354929	125360963	-	125354929;125358297	125358169;125360963	ES	0.5	50	50	ENSMUST00000086075.13	ENSMUSG00000037936.16	Scarb1	chr5	protein_coding	scavenger receptor class B, member 1
chr5	125361128	125361745	-	125361109	125361745	A3SS	0.5	50	50	ENSMUST00000086075.13	ENSMUSG00000037936.16	Scarb1	chr5	protein_coding	scavenger receptor class B, member 1
chr5	125381416	125393540	-	125381416	125417821	A5SS	0.25	50	50	ENSMUST00000086075.13	ENSMUSG00000037936.16	Scarb1	chr5	protein_coding	scavenger receptor class B, member 1
chr5	125381416	125403098	-	125381416	125417821	A5SS	0.25	50	50	ENSMUST00000086075.13	ENSMUSG00000037936.16	Scarb1	chr5	protein_coding	scavenger receptor class B, member 1
chr5	125381416	125416908	-	125381416	125417821	A5SS	0.25	50	50	ENSMUST00000086075.13	ENSMUSG00000037936.16	Scarb1	chr5	protein_coding	scavenger receptor class B, member 1
chr5	125381416	125403098	-	125381416	125393540	5pMXE	0.25	50	50	ENSMUST00000133624.2	ENSMUSG00000037936.16	Scarb1	chr5	protein_coding	scavenger receptor class B, member 1
chr5	125381416	125416908	-	125381416	125393540	5pMXE	0.25	50	50	ENSMUST00000133624.2	ENSMUSG00000037936.16	Scarb1	chr5	protein_coding	scavenger receptor class B, member 1
chr5	125381416	125403098	-	125381416	125416908	A5SS	0.25	50	50	ENSMUST00000137783.3	ENSMUSG00000037936.16	Scarb1	chr5	protein_coding	scavenger receptor class B, member 1
chr5	125465328	125466164	-	125465328	125466761	A5SS	0.33	50	50	ENSMUST00000136312.2	ENSMUSG00000008348.10	Ubc	chr5	protein_coding	ubiquitin C
chr5	125465328	125466974	-	125465328	125466761	A5SS	0.33	50	50	ENSMUST00000136312.2	ENSMUSG00000008348.10	Ubc	chr5	protein_coding	ubiquitin C
chr5	125465328	125466164	-	125465328	125466974	A5SS	0.33	50	50	ENSMUST00000156249.2	ENSMUSG00000008348.10	Ubc	chr5	protein_coding	ubiquitin C
chr5	125492230	125492930	-	125492230;125492462	125492365;125492930	ES	0.5	50	50	ENSMUST00000169485.6	ENSMUSG00000029480.14	Dhx37	chr5	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 37
chr5	125500635;125501424	125501244;125501689	-	125500635	125501689	cassetteExon	0.5	100	100	ENSMUST00000169485.6	ENSMUSG00000029480.14	Dhx37	chr5	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 37
chr5	125495647	125495723	-	125495630	125495723	A3SS	0.5	50	50	ENSMUST00000169485.6	ENSMUSG00000029480.14	Dhx37	chr5	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 37
chr5	125528836;125529309	125529212;125531390	+	125528836	125531390	cassetteExon	0.5	100	100	ENSMUST00000049040.14	ENSMUSG00000037905.14	Bri3bp	chr5	protein_coding	Bri3 binding protein
chr5	125589802	125590148	+	125589802	125590166	A3SS	0.5	50	50	ENSMUST00000031445.5	ENSMUSG00000029482.5	Aacs	chr5	protein_coding	acetoacetyl-CoA synthetase
chr5	125591291	125591927	+	125591291	125591992	A3SS	0.5	50	50	ENSMUST00000031445.5	ENSMUSG00000029482.5	Aacs	chr5	protein_coding	acetoacetyl-CoA synthetase
chr5	125592411	125593280	+	125592194	125593280	A5SS	0.5	50	50	ENSMUST00000031445.5	ENSMUSG00000029482.5	Aacs	chr5	protein_coding	acetoacetyl-CoA synthetase
chr5	125609754	125699525	+	125609057	125699525	A5SS	0.5	50	50	ENSMUST00000185104.2	ENSMUSG00000070498.4	Tmem132b	chr5	protein_coding	transmembrane protein 132B
chr5	126035854	126042834	-	126035854	126039272	5pMXE	0.5	50	50	ENSMUST00000197523.2	ENSMUSG00000106378.2	Gm42945	chr5	lncRNA	predicted gene 42945
chr5	126045784;126047480	126047364;126065211	+	126045784	126065211	cassetteExon	0.5	100	100	ENSMUST00000196784.5	ENSMUSG00000105593.5	Gm42952	chr5	lncRNA	predicted gene 42952
chr5	126044307	126045570	+	126040669	126045570	A5SS	0.5	50	50	ENSMUST00000196784.5	ENSMUSG00000105593.5	Gm42952	chr5	lncRNA	predicted gene 42952
chr5	126044307	126065211	+	126045784	126065211	A5SS&ES	0.33	50	50	ENSMUST00000196784.5	ENSMUSG00000105593.5	Gm42952	chr5	lncRNA	predicted gene 42952
chr5	126044307;126045784	126045570;126065211	+	126044307	126065211	cassetteExon	0.5	100	100	ENSMUST00000198903.2	ENSMUSG00000105593.5	Gm42952	chr5	lncRNA	predicted gene 42952
chr5	126044307;126047480	126047364;126065211	+	126044307	126065211	cassetteExon	0.5	100	100	ENSMUST00000198903.2	ENSMUSG00000105593.5	Gm42952	chr5	lncRNA	predicted gene 42952
chr5	126047480	126065211	+	126047480	126058279	3pMXE	0.25	50	50	ENSMUST00000197784.5	ENSMUSG00000105593.5	Gm42952	chr5	lncRNA	predicted gene 42952
chr5	126044307;126045784	126045570;126047364	+	126044307	126047364	cassetteExon	0.5	100	100	ENSMUST00000197784.5	ENSMUSG00000105593.5	Gm42952	chr5	lncRNA	predicted gene 42952
chr5	126047480;126054223	126054113;126058279	+	126047480	126058279	cassetteExon	0.5	100	100	ENSMUST00000197784.5	ENSMUSG00000105593.5	Gm42952	chr5	lncRNA	predicted gene 42952
chr5	126047480	126057221	+	126047480	126058279	A3SS	0.25	50	50	ENSMUST00000197784.5	ENSMUSG00000105593.5	Gm42952	chr5	lncRNA	predicted gene 42952
chr5	126047480	126065211	+	126047480	126057221	3pMXE	0.25	50	50	ENSMUST00000199324.5	ENSMUSG00000105593.5	Gm42952	chr5	lncRNA	predicted gene 42952
chr5	126047480	126054113	+	126047480	126057221	A3SS	0.25	50	50	ENSMUST00000199324.5	ENSMUSG00000105593.5	Gm42952	chr5	lncRNA	predicted gene 42952
chr5	126044307;126045784	126045570;126065211	+	126044307;126047480	126047364;126065211	MXE	0.5	100	100	ENSMUST00000198572.5	ENSMUSG00000105593.5	Gm42952	chr5	lncRNA	predicted gene 42952
chr5	126047480	126054113	+	126047480	126065211	A3SS	0.25	50	50	ENSMUST00000198572.5	ENSMUSG00000105593.5	Gm42952	chr5	lncRNA	predicted gene 42952
chr5	126784188	126788765	+	126784188	126800347	A3SS	0.5	50	50	ENSMUST00000197543.2	ENSMUSG00000105673.2	1700081B01Rik	chr5	lncRNA	RIKEN cDNA 1700081B01 gene
chr5	127108034	127121599	+	127104528	127121599	A5SS	0.5	50	50	ENSMUST00000196374.2	ENSMUSG00000105490.2	4933438B17Rik	chr5	lncRNA	RIKEN cDNA 4933438B17 gene
chr5	127108034	127121599	+	127108034	127147251	A3SS	0.5	50	50	ENSMUST00000196336.2	ENSMUSG00000105490.2	4933438B17Rik	chr5	lncRNA	RIKEN cDNA 4933438B17 gene
chr5	127247673;127251355	127251182;127254686	+	127247673	127254686	cassetteExon	0.5	100	100	ENSMUST00000196995.5	ENSMUSG00000105308.5	4930572K03Rik	chr5	lncRNA	RIKEN cDNA 4930572K03 gene
chr5	127319084	127363927	+	127319084	127436619	A3SS	0.5	50	50	ENSMUST00000119026.8	ENSMUSG00000034324.17	Tmem132c	chr5	protein_coding	transmembrane protein 132C
chr5	127631881	127641363	+	127631881	127639970	A3SS	0.5	50	50	ENSMUST00000119026.8	ENSMUSG00000034324.17	Tmem132c	chr5	protein_coding	transmembrane protein 132C
chr5	127615444	127628567	+	127613565	127628567	A5SS	0.33	50	50	ENSMUST00000119026.8	ENSMUSG00000034324.17	Tmem132c	chr5	protein_coding	transmembrane protein 132C
chr5	127618810	127628567	+	127613565	127628567	A5SS	0.33	50	50	ENSMUST00000119026.8	ENSMUSG00000034324.17	Tmem132c	chr5	protein_coding	transmembrane protein 132C
chr5	127618810	127628567	+	127615444	127628567	A5SS	0.33	50	50	ENSMUST00000128068.8	ENSMUSG00000034324.17	Tmem132c	chr5	protein_coding	transmembrane protein 132C
chr5	127334346;127337938	127337729;127344550	-	127334346	127344550	cassetteExon	0.5	100	100	ENSMUST00000145064.8	ENSMUSG00000087104.8	Tmem132cos	chr5	lncRNA	transmembrane protein 132C, opposite strand
chr5	127344631;127346820	127346753;127358602	-	127344631	127358602	cassetteExon	0.5	100	100	ENSMUST00000145064.8	ENSMUSG00000087104.8	Tmem132cos	chr5	lncRNA	transmembrane protein 132C, opposite strand
chr5	127681252	127685836	-	127681252;127681770	127681602;127685836	ES	0.33	50	50	ENSMUST00000031367.15	ENSMUSG00000029416.18	Slc15a4	chr5	protein_coding	solute carrier family 15, member 4
chr5	127686125	127709898	-	127686125	127693879	5pMXE	0.33	50	50	ENSMUST00000031367.15	ENSMUSG00000029416.18	Slc15a4	chr5	protein_coding	solute carrier family 15, member 4
chr5	127680862	127681175	-	127680925	127681175	A3SS	0.33	50	50	ENSMUST00000031367.15	ENSMUSG00000029416.18	Slc15a4	chr5	protein_coding	solute carrier family 15, member 4
chr5	127680915	127681175	-	127680925	127681175	A3SS	0.33	50	50	ENSMUST00000031367.15	ENSMUSG00000029416.18	Slc15a4	chr5	protein_coding	solute carrier family 15, member 4
chr5	127681712	127685836	-	127681770	127685836	A3SS	0.33	50	50	ENSMUST00000031367.15	ENSMUSG00000029416.18	Slc15a4	chr5	protein_coding	solute carrier family 15, member 4
chr5	127686125	127686271	-	127686125	127693879	A5SS	0.33	50	50	ENSMUST00000031367.15	ENSMUSG00000029416.18	Slc15a4	chr5	protein_coding	solute carrier family 15, member 4
chr5	127681252;127681712	127681602;127685836	-	127681252	127685836	cassetteExon	0.5	100	100	ENSMUST00000124569.8	ENSMUSG00000029416.18	Slc15a4	chr5	protein_coding	solute carrier family 15, member 4
chr5	127681712	127686038	-	127681712	127685836	A5SS	0.5	50	50	ENSMUST00000153832.8	ENSMUSG00000029416.18	Slc15a4	chr5	protein_coding	solute carrier family 15, member 4
chr5	127681252	127685836	-	127681252	127681602	5pMXE	0.5	50	50	ENSMUST00000198486.5	ENSMUSG00000029416.18	Slc15a4	chr5	protein_coding	solute carrier family 15, member 4
chr5	127679077	127680757	-	127673836	127680757	A3SS	0.5	50	50	ENSMUST00000198486.5	ENSMUSG00000029416.18	Slc15a4	chr5	protein_coding	solute carrier family 15, member 4
chr5	127673836	127677484	-	127673836	127680757	A5SS	0.5	50	50	ENSMUST00000198486.5	ENSMUSG00000029416.18	Slc15a4	chr5	protein_coding	solute carrier family 15, member 4
chr5	127686125	127686271	-	127686125	127709898	A5SS	0.33	50	50	ENSMUST00000144603.6	ENSMUSG00000029416.18	Slc15a4	chr5	protein_coding	solute carrier family 15, member 4
chr5	127680915	127681175	-	127680862	127681175	A3SS	0.33	50	50	ENSMUST00000200212.5	ENSMUSG00000029416.18	Slc15a4	chr5	protein_coding	solute carrier family 15, member 4
chr5	127740442	127741716	+	127740442;127740900	127740782;127741716	ES	0.5	50	50	ENSMUST00000137157.8	ENSMUSG00000049971.18	Glt1d1	chr5	protein_coding	glycosyltransferase 1 domain containing 1
chr5	128346441	128352390	-	128346441	128509350	A5SS	0.33	50	50	ENSMUST00000044441.8	ENSMUSG00000034310.9	Tmem132d	chr5	protein_coding	transmembrane protein 132D
chr5	128346441	128352775	-	128346441	128509350	A5SS	0.33	50	50	ENSMUST00000044441.8	ENSMUSG00000034310.9	Tmem132d	chr5	protein_coding	transmembrane protein 132D
chr5	128346441;128352562	128352390;128352775	-	128346441	128352775	cassetteExon	0.5	100	100	ENSMUST00000200136.2	ENSMUSG00000034310.9	Tmem132d	chr5	protein_coding	transmembrane protein 132D
chr5	128593932	128594649	-	128593936	128594649	A3SS	0.5	50	50	ENSMUST00000197085.2	ENSMUSG00000104980.2	4930573I07Rik	chr5	lncRNA	RIKEN cDNA 4930573I07 gene
chr5	128656349;128661360	128661228;128662336	-	128656349	128662336	cassetteExon	0.5	100	100	ENSMUST00000140028.8	ENSMUSG00000072591.11	Fzd10os	chr5	lncRNA	frizzled class receptor 10, opposite strand
chr5	128656349	128659779	-	128656349	128662336	A5SS	0.33	50	50	ENSMUST00000140028.8	ENSMUSG00000072591.11	Fzd10os	chr5	lncRNA	frizzled class receptor 10, opposite strand
chr5	128656349	128661228	-	128656349;128660051	128659779;128661228	ES	0.33	50	50	ENSMUST00000154305.8	ENSMUSG00000072591.11	Fzd10os	chr5	lncRNA	frizzled class receptor 10, opposite strand
chr5	128662470	128677601	-	128662470;128672828	128671272;128677601	ES	0.33	50	50	ENSMUST00000154305.8	ENSMUSG00000072591.11	Fzd10os	chr5	lncRNA	frizzled class receptor 10, opposite strand
chr5	128661091	128661228	-	128660051	128661228	A3SS	0.33	50	50	ENSMUST00000154305.8	ENSMUSG00000072591.11	Fzd10os	chr5	lncRNA	frizzled class receptor 10, opposite strand
chr5	128671974	128677601	-	128672828	128677601	A3SS	0.33	50	50	ENSMUST00000154305.8	ENSMUSG00000072591.11	Fzd10os	chr5	lncRNA	frizzled class receptor 10, opposite strand
chr5	128661091	128661228	-	128656349	128661228	A3SS	0.33	50	50	ENSMUST00000137295.8	ENSMUSG00000072591.11	Fzd10os	chr5	lncRNA	frizzled class receptor 10, opposite strand
chr5	128662470	128677601	-	128662470;128671974	128671272;128677601	ES	0.33	50	50	ENSMUST00000134673.8	ENSMUSG00000072591.11	Fzd10os	chr5	lncRNA	frizzled class receptor 10, opposite strand
chr5	128656349	128662336	-	128661360	128662336	3pMXE	0.5	50	50	ENSMUST00000126472.2	ENSMUSG00000072591.11	Fzd10os	chr5	lncRNA	frizzled class receptor 10, opposite strand
chr5	128671974	128677601	-	128662470	128677601	A3SS	0.33	50	50	ENSMUST00000126472.2	ENSMUSG00000072591.11	Fzd10os	chr5	lncRNA	frizzled class receptor 10, opposite strand
chr5	128672828	128677601	-	128662470	128677601	A3SS	0.33	50	50	ENSMUST00000126472.2	ENSMUSG00000072591.11	Fzd10os	chr5	lncRNA	frizzled class receptor 10, opposite strand
chr5	128662470	128671272	-	128662470	128677601	A5SS	0.5	50	50	ENSMUST00000126472.2	ENSMUSG00000072591.11	Fzd10os	chr5	lncRNA	frizzled class receptor 10, opposite strand
chr5	128814590	128816108	+	128785180	128816108	A5SS	0.5	50	50	ENSMUST00000200192.5	ENSMUSG00000029423.11	Piwil1	chr5	protein_coding	piwi-like RNA-mediated gene silencing 1
chr5	128883625;128889067	128889047;128890626	-	128883625	128890626	cassetteExon	0.5	100	100	ENSMUST00000199537.5	ENSMUSG00000029420.15	Rimbp2	chr5	protein_coding	RIMS binding protein 2
chr5	128859615	128861855	-	128857440	128861855	A3SS	0.5	50	50	ENSMUST00000199537.5	ENSMUSG00000029420.15	Rimbp2	chr5	protein_coding	RIMS binding protein 2
chr5	128857440	128858905	-	128857440	128861855	A5SS	0.5	50	50	ENSMUST00000199537.5	ENSMUSG00000029420.15	Rimbp2	chr5	protein_coding	RIMS binding protein 2
chr5	128863862	128865277	-	128863862	128865223	A5SS	0.5	50	50	ENSMUST00000199537.5	ENSMUSG00000029420.15	Rimbp2	chr5	protein_coding	RIMS binding protein 2
chr5	128836284	128838404	-	128837913	128838404	A3SS	0.33	50	50	ENSMUST00000198941.5	ENSMUSG00000029420.15	Rimbp2	chr5	protein_coding	RIMS binding protein 2
chr5	128837910	128838404	-	128837913	128838404	A3SS	0.33	50	50	ENSMUST00000198941.5	ENSMUSG00000029420.15	Rimbp2	chr5	protein_coding	RIMS binding protein 2
chr5	128837910	128838404	-	128836284	128838404	A3SS	0.33	50	50	ENSMUST00000239036.2	ENSMUSG00000029420.15	Rimbp2	chr5	protein_coding	RIMS binding protein 2
chr5	128922735;128974786	128974675;129030031	-	128922735	129030031	cassetteExon	0.5	100	100	ENSMUST00000196085.5	ENSMUSG00000029420.15	Rimbp2	chr5	protein_coding	RIMS binding protein 2
chr5	128863862	128865277	-	128861989	128865277	A3SS	0.5	50	50	ENSMUST00000196085.5	ENSMUSG00000029420.15	Rimbp2	chr5	protein_coding	RIMS binding protein 2
chr5	128922735	128954018	-	128922735	129030031	A5SS	0.33	50	50	ENSMUST00000196085.5	ENSMUSG00000029420.15	Rimbp2	chr5	protein_coding	RIMS binding protein 2
chr5	128857440	128861855	-	128857440;128859615	128858905;128861855	ES	0.5	50	50	ENSMUST00000238334.2	ENSMUSG00000029420.15	Rimbp2	chr5	protein_coding	RIMS binding protein 2
chr5	128922735	128974675	-	128922735	128954018	5pMXE	0.33	50	50	ENSMUST00000199737.5	ENSMUSG00000029420.15	Rimbp2	chr5	protein_coding	RIMS binding protein 2
chr5	129063494	129065866	-	129063494;129064906	129064782;129065866	ES	0.5	50	50	ENSMUST00000031378.14	ENSMUSG00000029428.14	Stx2	chr5	protein_coding	syntaxin 2
chr5	129065976;129066470	129066443;129068028	-	129065976	129068028	cassetteExon	0.5	100	100	ENSMUST00000031378.14	ENSMUSG00000029428.14	Stx2	chr5	protein_coding	syntaxin 2
chr5	129073521	129076574	-	129073525	129076574	A3SS	0.5	50	50	ENSMUST00000031378.14	ENSMUSG00000029428.14	Stx2	chr5	protein_coding	syntaxin 2
chr5	129065976	129068028	-	129065976	129066443	5pMXE	0.5	50	50	ENSMUST00000144846.2	ENSMUSG00000029428.14	Stx2	chr5	protein_coding	syntaxin 2
chr5	129186725	129192119	+	129186725;129189387	129189292;129192119	ES	0.5	50	50	ENSMUST00000056617.14	ENSMUSG00000044017.17	Adgrd1	chr5	protein_coding	adhesion G protein-coupled receptor D1
chr5	129441412	129441626	+	129441068	129441626	A5SS	0.5	50	50	ENSMUST00000198925.2	ENSMUSG00000104681.2	Gm43001	chr5	lncRNA	predicted gene 43001
chr5	129631772;129636685	129636514;129637744	+	129631772	129637744	cassetteExon	0.5	100	100	ENSMUST00000053737.9	ENSMUSG00000029439.15	Sfswap	chr5	protein_coding	splicing factor SWAP
chr5	129631772;129636685	129636533;129637744	+	129631772	129637744	cassetteExon	0.5	100	100	ENSMUST00000053737.9	ENSMUSG00000029439.15	Sfswap	chr5	protein_coding	splicing factor SWAP
chr5	129581216	129581327	+	129581216	129581827	A3SS	0.5	50	50	ENSMUST00000053737.9	ENSMUSG00000029439.15	Sfswap	chr5	protein_coding	splicing factor SWAP
chr5	129580657	129581047	+	129578660	129581047	A5SS	0.33	50	50	ENSMUST00000053737.9	ENSMUSG00000029439.15	Sfswap	chr5	protein_coding	splicing factor SWAP
chr5	129580762	129581047	+	129578660	129581047	A5SS	0.33	50	50	ENSMUST00000053737.9	ENSMUSG00000029439.15	Sfswap	chr5	protein_coding	splicing factor SWAP
chr5	129581169	129581827	+	129581216	129581827	A5SS	0.5	50	50	ENSMUST00000053737.9	ENSMUSG00000029439.15	Sfswap	chr5	protein_coding	splicing factor SWAP
chr5	129593196	129616639	+	129593215	129616639	A5SS	0.5	50	50	ENSMUST00000053737.9	ENSMUSG00000029439.15	Sfswap	chr5	protein_coding	splicing factor SWAP
chr5	129620359	129626518	+	129620443	129626518	A5SS	0.5	50	50	ENSMUST00000053737.9	ENSMUSG00000029439.15	Sfswap	chr5	protein_coding	splicing factor SWAP
chr5	129580762	129581047	+	129580657	129581047	A5SS	0.33	50	50	ENSMUST00000199925.5	ENSMUSG00000029439.15	Sfswap	chr5	protein_coding	splicing factor SWAP
chr5	129631772	129636514	+	129631772	129636533	A3SS	0.33	50	50	ENSMUST00000198266.5	ENSMUSG00000029439.15	Sfswap	chr5	protein_coding	splicing factor SWAP
chr5	129631772	129637744	+	129631772	129636514	3pMXE	0.33	50	50	ENSMUST00000199394.2	ENSMUSG00000029439.15	Sfswap	chr5	protein_coding	splicing factor SWAP
chr5	129770139	129773081	-	129770139	129770252	5pMXE	0.5	50	50	ENSMUST00000182381.2	ENSMUSG00000034219.16	Septin14	chr5	protein_coding	septin 14
chr5	129766774	129767857	-	129766771	129767857	A3SS	0.5	50	50	ENSMUST00000182381.2	ENSMUSG00000034219.16	Septin14	chr5	protein_coding	septin 14
chr5	129792634	129792748	+	129792613	129792748	A5SS	0.5	50	50	ENSMUST00000119576.8	ENSMUSG00000034211.15	Mrps17	chr5	protein_coding	mitochondrial ribosomal protein S17
chr5	129792827	129793791	+	129792974	129793791	A5SS	0.16	50	50	ENSMUST00000119576.8	ENSMUSG00000034211.15	Mrps17	chr5	protein_coding	mitochondrial ribosomal protein S17
chr5	129792922	129793791	+	129792974	129793791	A5SS	0.16	50	50	ENSMUST00000119576.8	ENSMUSG00000034211.15	Mrps17	chr5	protein_coding	mitochondrial ribosomal protein S17
chr5	129792958	129793791	+	129792974	129793791	A5SS	0.16	50	50	ENSMUST00000119576.8	ENSMUSG00000034211.15	Mrps17	chr5	protein_coding	mitochondrial ribosomal protein S17
chr5	129792976	129793791	+	129792974	129793791	A5SS	0.16	50	50	ENSMUST00000119576.8	ENSMUSG00000034211.15	Mrps17	chr5	protein_coding	mitochondrial ribosomal protein S17
chr5	129793005	129793791	+	129792974	129793791	A5SS	0.16	50	50	ENSMUST00000119576.8	ENSMUSG00000034211.15	Mrps17	chr5	protein_coding	mitochondrial ribosomal protein S17
chr5	129792922	129793791	+	129792827	129793791	A5SS	0.16	50	50	ENSMUST00000042191.12	ENSMUSG00000034211.15	Mrps17	chr5	protein_coding	mitochondrial ribosomal protein S17
chr5	129792958	129793791	+	129792827	129793791	A5SS	0.16	50	50	ENSMUST00000042191.12	ENSMUSG00000034211.15	Mrps17	chr5	protein_coding	mitochondrial ribosomal protein S17
chr5	129792976	129793791	+	129792827	129793791	A5SS	0.16	50	50	ENSMUST00000042191.12	ENSMUSG00000034211.15	Mrps17	chr5	protein_coding	mitochondrial ribosomal protein S17
chr5	129793005	129793791	+	129792827	129793791	A5SS	0.16	50	50	ENSMUST00000042191.12	ENSMUSG00000034211.15	Mrps17	chr5	protein_coding	mitochondrial ribosomal protein S17
chr5	129792958	129793791	+	129792922	129793791	A5SS	0.16	50	50	ENSMUST00000118420.8	ENSMUSG00000034211.15	Mrps17	chr5	protein_coding	mitochondrial ribosomal protein S17
chr5	129792976	129793791	+	129792922	129793791	A5SS	0.16	50	50	ENSMUST00000118420.8	ENSMUSG00000034211.15	Mrps17	chr5	protein_coding	mitochondrial ribosomal protein S17
chr5	129793005	129793791	+	129792922	129793791	A5SS	0.16	50	50	ENSMUST00000118420.8	ENSMUSG00000034211.15	Mrps17	chr5	protein_coding	mitochondrial ribosomal protein S17
chr5	129792958	129793791	+	129792976	129793791	A5SS	0.16	50	50	ENSMUST00000154358.6	ENSMUSG00000034211.15	Mrps17	chr5	protein_coding	mitochondrial ribosomal protein S17
chr5	129793005	129793791	+	129792976	129793791	A5SS	0.16	50	50	ENSMUST00000154358.6	ENSMUSG00000034211.15	Mrps17	chr5	protein_coding	mitochondrial ribosomal protein S17
chr5	129792958	129793791	+	129793005	129793791	A5SS	0.16	50	50	ENSMUST00000119604.8	ENSMUSG00000034211.15	Mrps17	chr5	protein_coding	mitochondrial ribosomal protein S17
chr5	129825097	129831906	+	129825097;129830384	129830290;129831906	ES	0.5	50	50	ENSMUST00000086046.10	ENSMUSG00000029432.13	Nipsnap2	chr5	protein_coding	nipsnap homolog 2
chr5	129830384	129831836	+	129830384	129831906	A3SS	0.5	50	50	ENSMUST00000086046.10	ENSMUSG00000029432.13	Nipsnap2	chr5	protein_coding	nipsnap homolog 2
chr5	129825097	129831906	+	129830384	129831906	5pMXE	0.5	50	50	ENSMUST00000137604.2	ENSMUSG00000029432.13	Nipsnap2	chr5	protein_coding	nipsnap homolog 2
chr5	129848696;129854005	129853894;129856086	-	129848696	129856086	cassetteExon	0.5	100	100	ENSMUST00000118268.9	ENSMUSG00000029446.15	Psph	chr5	protein_coding	phosphoserine phosphatase
chr5	129846448	129847670	-	129842962	129847670	A3SS	0.5	50	50	ENSMUST00000118268.9	ENSMUSG00000029446.15	Psph	chr5	protein_coding	phosphoserine phosphatase
chr5	129842962	129843483	-	129842962	129847670	A5SS	0.5	50	50	ENSMUST00000118268.9	ENSMUSG00000029446.15	Psph	chr5	protein_coding	phosphoserine phosphatase
chr5	129847804	129848051	-	129847804	129848540	A5SS	0.5	50	50	ENSMUST00000118268.9	ENSMUSG00000029446.15	Psph	chr5	protein_coding	phosphoserine phosphatase
chr5	129848696	129856126	-	129848696	129856086	A5SS	0.33	50	50	ENSMUST00000118268.9	ENSMUSG00000029446.15	Psph	chr5	protein_coding	phosphoserine phosphatase
chr5	129856508;129863720	129863655;129864019	-	129856508	129864019	cassetteExon	0.5	100	100	ENSMUST00000031399.13	ENSMUSG00000029446.15	Psph	chr5	protein_coding	phosphoserine phosphatase
chr5	129848696	129853894	-	129848696	129856126	A5SS	0.33	50	50	ENSMUST00000201394.4	ENSMUSG00000029446.15	Psph	chr5	protein_coding	phosphoserine phosphatase
chr5	129867751	129867886	+	129867751	129868533	A3SS	0.5	50	50	ENSMUST00000201414.5	ENSMUSG00000029447.14	Cct6a	chr5	protein_coding	chaperonin containing Tcp1, subunit 6a (zeta)
chr5	129875927	129881715	+	129875927;129878898	129878742;129881715	ES	0.5	50	50	ENSMUST00000171300.8	ENSMUSG00000025538.16	Sumf2	chr5	protein_coding	sulfatase modifying factor 2
chr5	129881826	129883529	+	129881826;129882908	129882864;129883529	ES	0.33	50	50	ENSMUST00000171300.8	ENSMUSG00000025538.16	Sumf2	chr5	protein_coding	sulfatase modifying factor 2
chr5	129882908;129883348	129883305;129883529	+	129882908	129883529	cassetteExon	0.5	100	100	ENSMUST00000171300.8	ENSMUSG00000025538.16	Sumf2	chr5	protein_coding	sulfatase modifying factor 2
chr5	129881826;129883348	129882864;129883529	+	129881826	129883529	cassetteExon	0.5	100	100	ENSMUST00000201874.4	ENSMUSG00000025538.16	Sumf2	chr5	protein_coding	sulfatase modifying factor 2
chr5	129887136;129889055	129888678;129891480	+	129887136	129891480	cassetteExon	0.5	100	100	ENSMUST00000122826.5	ENSMUSG00000025538.16	Sumf2	chr5	protein_coding	sulfatase modifying factor 2
chr5	129924693;129927934	129927844;129928024	+	129924693	129928024	cassetteExon	0.5	100	100	ENSMUST00000041466.14	ENSMUSG00000034173.14	Zbed5	chr5	protein_coding	zinc finger, BED type containing 5
chr5	129971206	130010982	+	129971206;130007469	130007360;130010982	ES	0.5	50	50	ENSMUST00000051758.11	ENSMUSG00000066735.9	Vkorc1l1	chr5	protein_coding	vitamin K epoxide reductase complex, subunit 1-like 1
chr5	129971206;130006033	130005830;130007360	+	129971206	130007360	cassetteExon	0.5	100	100	ENSMUST00000051758.11	ENSMUSG00000066735.9	Vkorc1l1	chr5	protein_coding	vitamin K epoxide reductase complex, subunit 1-like 1
chr5	129971068	130007360	+	129971206	130007360	A5SS	0.33	50	50	ENSMUST00000051758.11	ENSMUSG00000066735.9	Vkorc1l1	chr5	protein_coding	vitamin K epoxide reductase complex, subunit 1-like 1
chr5	129971206	130005830	+	129971206	130010982	A3SS	0.33	50	50	ENSMUST00000201855.2	ENSMUSG00000066735.9	Vkorc1l1	chr5	protein_coding	vitamin K epoxide reductase complex, subunit 1-like 1
chr5	129971206	130010982	+	130007469	130010982	A5SS&ES	0.5	50	50	ENSMUST00000073945.6	ENSMUSG00000066735.9	Vkorc1l1	chr5	protein_coding	vitamin K epoxide reductase complex, subunit 1-like 1
chr5	130006033	130007360	+	129971068	130007360	A5SS	0.33	50	50	ENSMUST00000073945.6	ENSMUSG00000066735.9	Vkorc1l1	chr5	protein_coding	vitamin K epoxide reductase complex, subunit 1-like 1
chr5	129971206	130007360	+	130006033	130007360	5pMXE	0.33	50	50	ENSMUST00000202486.2	ENSMUSG00000066735.9	Vkorc1l1	chr5	protein_coding	vitamin K epoxide reductase complex, subunit 1-like 1
chr5	130028910	130029598	-	130028910;130029383	130029202;130029598	ES	0.5	50	50	ENSMUST00000026613.14	ENSMUSG00000025534.18	Gusb	chr5	protein_coding	glucuronidase, beta
chr5	130028910	130029598	-	130029383	130029598	A3SS	0.5	50	50	ENSMUST00000122994.2	ENSMUSG00000025534.18	Gusb	chr5	protein_coding	glucuronidase, beta
chr5	130048697;130052539	130052477;130052883	-	130048697	130052883	cassetteExon	0.5	100	100	ENSMUST00000161094.8	ENSMUSG00000025533.16	Asl	chr5	protein_coding	argininosuccinate lyase
chr5	130042374	130042804	-	130042356	130042804	A3SS	0.5	50	50	ENSMUST00000161094.8	ENSMUSG00000025533.16	Asl	chr5	protein_coding	argininosuccinate lyase
chr5	130045669	130047151	-	130045214	130047151	A3SS	0.5	50	50	ENSMUST00000161094.8	ENSMUSG00000025533.16	Asl	chr5	protein_coding	argininosuccinate lyase
chr5	130052937	130053049	-	130052937	130053135	A5SS	0.5	50	50	ENSMUST00000161094.8	ENSMUSG00000025533.16	Asl	chr5	protein_coding	argininosuccinate lyase
chr5	130058248	130066661	+	130058248;130063789	130063753;130066661	ES	0.5	50	50	ENSMUST00000026608.11	ENSMUSG00000025532.14	Crcp	chr5	protein_coding	calcitonin gene-related peptide-receptor component protein
chr5	130066759	130077767	+	130066759;130071141	130071047;130077767	ES	0.5	50	50	ENSMUST00000026608.11	ENSMUSG00000025532.14	Crcp	chr5	protein_coding	calcitonin gene-related peptide-receptor component protein
chr5	130058335	130063753	+	130058248	130063753	A5SS	0.5	50	50	ENSMUST00000026608.11	ENSMUSG00000025532.14	Crcp	chr5	protein_coding	calcitonin gene-related peptide-receptor component protein
chr5	130066759	130088546	+	130066759;130077824	130077767;130088546	ES	0.5	50	50	ENSMUST00000202163.4	ENSMUSG00000025532.14	Crcp	chr5	protein_coding	calcitonin gene-related peptide-receptor component protein
chr5	130066759	130071047	+	130066759	130088546	A3SS	0.33	50	50	ENSMUST00000202756.2	ENSMUSG00000025532.14	Crcp	chr5	protein_coding	calcitonin gene-related peptide-receptor component protein
chr5	130058248	130066661	+	130063789	130066661	A5SS&ES	0.5	50	50	ENSMUST00000156729.2	ENSMUSG00000025532.14	Crcp	chr5	protein_coding	calcitonin gene-related peptide-receptor component protein
chr5	130108502	130130431	+	130102275	130130431	A5SS	0.33	50	50	ENSMUST00000118993.8	ENSMUSG00000034118.16	Tpst1	chr5	protein_coding	protein-tyrosine sulfotransferase 1
chr5	130122557	130130431	+	130102275	130130431	A5SS	0.33	50	50	ENSMUST00000118993.8	ENSMUSG00000034118.16	Tpst1	chr5	protein_coding	protein-tyrosine sulfotransferase 1
chr5	130122557	130130431	+	130108502	130130431	A5SS	0.33	50	50	ENSMUST00000040721.9	ENSMUSG00000034118.16	Tpst1	chr5	protein_coding	protein-tyrosine sulfotransferase 1
chr5	130174067	130176818	+	130174067	130176895	A3SS	0.5	50	50	ENSMUST00000040616.9	ENSMUSG00000034110.9	Kctd7	chr5	protein_coding	potassium channel tetramerisation domain containing 7
chr5	130180650	130181072	+	130180690	130181072	A5SS	0.5	50	50	ENSMUST00000040616.9	ENSMUSG00000034110.9	Kctd7	chr5	protein_coding	potassium channel tetramerisation domain containing 7
chr5	130219884	130235850	+	130219884;130226957	130226791;130235850	ES	0.5	50	50	ENSMUST00000119797.8	ENSMUSG00000025340.15	Rabgef1	chr5	protein_coding	RAB guanine nucleotide exchange factor (GEF) 1
chr5	130219884	130226788	+	130219884	130226791	A3SS	0.33	50	50	ENSMUST00000119797.8	ENSMUSG00000025340.15	Rabgef1	chr5	protein_coding	RAB guanine nucleotide exchange factor (GEF) 1
chr5	130219884	130235850	+	130219884;130226957	130226788;130235850	ES	0.5	50	50	ENSMUST00000148264.8	ENSMUSG00000025340.15	Rabgef1	chr5	protein_coding	RAB guanine nucleotide exchange factor (GEF) 1
chr5	130248756	130258290	+	130246161	130258290	A5SS	0.25	50	50	ENSMUST00000202612.2	ENSMUSG00000053094.16	Tmem248	chr5	protein_coding	transmembrane protein 248
chr5	130248760	130258290	+	130246161	130258290	A5SS	0.25	50	50	ENSMUST00000202612.2	ENSMUSG00000053094.16	Tmem248	chr5	protein_coding	transmembrane protein 248
chr5	130251413	130258290	+	130246161	130258290	A5SS	0.25	50	50	ENSMUST00000202612.2	ENSMUSG00000053094.16	Tmem248	chr5	protein_coding	transmembrane protein 248
chr5	130248756	130258290	+	130248760	130258290	A5SS	0.25	50	50	ENSMUST00000202305.4	ENSMUSG00000053094.16	Tmem248	chr5	protein_coding	transmembrane protein 248
chr5	130251413	130258290	+	130248760	130258290	A5SS	0.25	50	50	ENSMUST00000202305.4	ENSMUSG00000053094.16	Tmem248	chr5	protein_coding	transmembrane protein 248
chr5	130251413	130258290	+	130248756	130258290	A5SS	0.25	50	50	ENSMUST00000200802.4	ENSMUSG00000053094.16	Tmem248	chr5	protein_coding	transmembrane protein 248
chr5	130282845	130284051	-	130282909	130284051	A3SS	0.33	50	50	ENSMUST00000026387.11	ENSMUSG00000025337.11	Sbds	chr5	protein_coding	SBDS ribosome maturation factor
chr5	130282850	130284051	-	130282909	130284051	A3SS	0.33	50	50	ENSMUST00000026387.11	ENSMUSG00000025337.11	Sbds	chr5	protein_coding	SBDS ribosome maturation factor
chr5	130282909	130283985	-	130282909	130284051	A5SS	0.5	50	50	ENSMUST00000026387.11	ENSMUSG00000025337.11	Sbds	chr5	protein_coding	SBDS ribosome maturation factor
chr5	130282845	130284051	-	130282850	130284051	A3SS	0.33	50	50	ENSMUST00000200815.4	ENSMUSG00000025337.11	Sbds	chr5	protein_coding	SBDS ribosome maturation factor
chr5	130303584	130305830	+	130303584	130306774	A3SS	0.5	50	50	ENSMUST00000173375.2	ENSMUSG00000056310.15	Tyw1	chr5	protein_coding	tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)
chr5	130286034	130287774	+	130284486	130287774	A5SS	0.5	50	50	ENSMUST00000173375.2	ENSMUSG00000056310.15	Tyw1	chr5	protein_coding	tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)
chr5	130413667	130443598	+	130398475	130443598	A5SS	0.5	50	50	ENSMUST00000086029.10	ENSMUSG00000060371.13	Caln1	chr5	protein_coding	calneuron 1
chr5	130476732	130534905	+	130443787	130534905	A5SS	0.25	50	50	ENSMUST00000086029.10	ENSMUSG00000060371.13	Caln1	chr5	protein_coding	calneuron 1
chr5	130477065	130534905	+	130443787	130534905	A5SS	0.25	50	50	ENSMUST00000086029.10	ENSMUSG00000060371.13	Caln1	chr5	protein_coding	calneuron 1
chr5	130478299	130534905	+	130443787	130534905	A5SS	0.25	50	50	ENSMUST00000086029.10	ENSMUSG00000060371.13	Caln1	chr5	protein_coding	calneuron 1
chr5	130477065	130534905	+	130476732	130534905	A5SS	0.25	50	50	ENSMUST00000141131.5	ENSMUSG00000060371.13	Caln1	chr5	protein_coding	calneuron 1
chr5	130478299	130534905	+	130476732	130534905	A5SS	0.25	50	50	ENSMUST00000141131.5	ENSMUSG00000060371.13	Caln1	chr5	protein_coding	calneuron 1
chr5	130478299	130534905	+	130477065	130534905	A5SS	0.25	50	50	ENSMUST00000111287.8	ENSMUSG00000060371.13	Caln1	chr5	protein_coding	calneuron 1
chr5	131488994	131494870	-	131488994;131490191	131490120;131494870	ES	0.5	50	50	ENSMUST00000161226.11	ENSMUSG00000029673.20	Auts2	chr5	protein_coding	autism susceptibility candidate 2
chr5	131494965	131501097	-	131494965;131499296	131499252;131501097	ES	0.5	50	50	ENSMUST00000161226.11	ENSMUSG00000029673.20	Auts2	chr5	protein_coding	autism susceptibility candidate 2
chr5	131469531;131472643	131472594;131474237	-	131469531;131472516	131472294;131474237	MXE	0.5	100	100	ENSMUST00000161226.11	ENSMUSG00000029673.20	Auts2	chr5	protein_coding	autism susceptibility candidate 2
chr5	131504014	131505391	-	131504011	131505391	A3SS	0.5	50	50	ENSMUST00000161226.11	ENSMUSG00000029673.20	Auts2	chr5	protein_coding	autism susceptibility candidate 2
chr5	132056748	132059829	-	131799628	132059829	A3SS	0.5	50	50	ENSMUST00000161226.11	ENSMUSG00000029673.20	Auts2	chr5	protein_coding	autism susceptibility candidate 2
chr5	131480863	131484518	-	131480863	131486677	A5SS	0.5	50	50	ENSMUST00000161226.11	ENSMUSG00000029673.20	Auts2	chr5	protein_coding	autism susceptibility candidate 2
chr5	131499296	131501076	-	131499296	131501097	A5SS	0.5	50	50	ENSMUST00000161226.11	ENSMUSG00000029673.20	Auts2	chr5	protein_coding	autism susceptibility candidate 2
chr5	131562711	131566499	-	131562711	131799599	A5SS	0.33	50	50	ENSMUST00000161226.11	ENSMUSG00000029673.20	Auts2	chr5	protein_coding	autism susceptibility candidate 2
chr5	131562711	131644796	-	131562711	131799599	A5SS	0.33	50	50	ENSMUST00000161226.11	ENSMUSG00000029673.20	Auts2	chr5	protein_coding	autism susceptibility candidate 2
chr5	132287975	132477958	-	132287975	132570354	A5SS	0.5	50	50	ENSMUST00000161226.11	ENSMUSG00000029673.20	Auts2	chr5	protein_coding	autism susceptibility candidate 2
chr5	131562711	131566499	-	131562711	131644796	A5SS	0.33	50	50	ENSMUST00000161804.9	ENSMUSG00000029673.20	Auts2	chr5	protein_coding	autism susceptibility candidate 2
chr5	131494965	131501097	-	131494965	131499252	A5SS&ES	0.5	50	50	ENSMUST00000160071.10	ENSMUSG00000029673.20	Auts2	chr5	protein_coding	autism susceptibility candidate 2
chr5	134243511	134243793	+	134243511	134250647	A3SS	0.25	50	50	ENSMUST00000123941.8	ENSMUSG00000015942.10	Gtf2ird2	chr5	protein_coding	GTF2I repeat domain containing 2
chr5	134243511	134244978	+	134243511	134250647	A3SS	0.25	50	50	ENSMUST00000123941.8	ENSMUSG00000015942.10	Gtf2ird2	chr5	protein_coding	GTF2I repeat domain containing 2
chr5	134243511	134245088	+	134243511	134250647	A3SS	0.25	50	50	ENSMUST00000123941.8	ENSMUSG00000015942.10	Gtf2ird2	chr5	protein_coding	GTF2I repeat domain containing 2
chr5	134220116	134221492	+	134220266	134221492	A5SS	0.5	50	50	ENSMUST00000123941.8	ENSMUSG00000015942.10	Gtf2ird2	chr5	protein_coding	GTF2I repeat domain containing 2
chr5	134243511;134243862	134243793;134244978	+	134243511	134244978	cassetteExon	0.5	100	100	ENSMUST00000016086.10	ENSMUSG00000015942.10	Gtf2ird2	chr5	protein_coding	GTF2I repeat domain containing 2
chr5	134243511	134245088	+	134243511	134244978	A3SS	0.25	50	50	ENSMUST00000016086.10	ENSMUSG00000015942.10	Gtf2ird2	chr5	protein_coding	GTF2I repeat domain containing 2
chr5	134243511	134245088	+	134243511	134243793	A3SS&ES	0.33	50	50	ENSMUST00000135588.8	ENSMUSG00000015942.10	Gtf2ird2	chr5	protein_coding	GTF2I repeat domain containing 2
chr5	134250722	134250842	-	134250722	134250884	A5SS	0.5	50	50	ENSMUST00000146354.8	ENSMUSG00000015950.14	Ncf1	chr5	protein_coding	neutrophil cytosolic factor 1
chr5	134267746	134269097	-	134267746;134268425	134268351;134269097	ES	0.5	50	50	ENSMUST00000059042.15	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134295510	134303393	-	134295510;134301440	134301378;134303393	ES	0.5	50	50	ENSMUST00000059042.15	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134303449	134308291	-	134303449;134305282	134305226;134308291	ES	0.33	50	50	ENSMUST00000059042.15	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134324467;134335585	134335386;134343237	-	134324467	134343237	cassetteExon	0.5	100	100	ENSMUST00000059042.15	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134272453	134272755	-	134272441	134272755	A3SS	0.5	50	50	ENSMUST00000059042.15	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134288363	134289421	-	134284862	134289421	A3SS	0.5	50	50	ENSMUST00000059042.15	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134318266	134322601	-	134318275	134322601	A3SS	0.5	50	50	ENSMUST00000059042.15	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134303449	134303878	-	134303449	134305226	A5SS	0.2	50	50	ENSMUST00000059042.15	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134303449	134308626	-	134303449	134305226	A5SS&ES	0.2	50	50	ENSMUST00000059042.15	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134324467	134340527	-	134324467	134343237	A5SS	0.2	50	50	ENSMUST00000059042.15	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134324467	134343042	-	134324467	134343237	A5SS	0.2	50	50	ENSMUST00000059042.15	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134324467	134343475	-	134324467	134343237	A5SS	0.2	50	50	ENSMUST00000059042.15	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134303449	134311641	-	134303449;134308368	134308291;134311641	ES	0.33	50	50	ENSMUST00000111261.12	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134303449	134303878	-	134303449	134308291	A5SS	0.2	50	50	ENSMUST00000111261.12	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134303449	134308626	-	134303449	134308291	A5SS&ES	0.2	50	50	ENSMUST00000111261.12	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134295510	134308291	-	134295510;134303449	134303393;134308291	ES	0.33	50	50	ENSMUST00000173341.9	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134295510;134303449	134303393;134311641	-	134295510	134311641	cassetteExon	0.5	100	100	ENSMUST00000172715.8	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134295510;134308368	134308291;134311641	-	134295510	134311641	cassetteExon	0.5	100	100	ENSMUST00000172715.8	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134295510	134301378	-	134295510	134311641	A5SS	0.25	50	50	ENSMUST00000172715.8	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134303449	134311641	-	134303449	134308626	5pMXE	0.2	50	50	ENSMUST00000172904.8	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134295510	134308291	-	134295510	134303393	A5SS&ES	0.33	50	50	ENSMUST00000172904.8	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134303449	134303878	-	134303449	134308626	A5SS	0.2	50	50	ENSMUST00000172904.8	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134324467	134335386	-	134324467	134343475	A5SS	0.2	50	50	ENSMUST00000174155.8	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134324467	134340527	-	134324467	134343475	A5SS	0.2	50	50	ENSMUST00000174155.8	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134324467	134343042	-	134324467	134343475	A5SS	0.2	50	50	ENSMUST00000174155.8	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134267746	134269097	-	134268425	134269097	3pMXE	0.5	50	50	ENSMUST00000173888.8	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134295510;134303449	134303393;134311641	-	134295510;134308368	134308291;134311641	MXE	0.5	100	100	ENSMUST00000173888.8	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134305282	134308291	-	134295510	134308291	A3SS	0.33	50	50	ENSMUST00000173888.8	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134295510	134301378	-	134295510	134308291	A5SS	0.25	50	50	ENSMUST00000173888.8	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134295510	134303393	-	134295510	134301378	5pMXE	0.25	50	50	ENSMUST00000174182.8	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134303449	134303878	-	134303449	134311641	A5SS	0.2	50	50	ENSMUST00000174133.5	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134303449	134305226	-	134303449	134311641	A5SS	0.2	50	50	ENSMUST00000174133.5	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134324467	134335386	-	134324467	134343042	A5SS	0.2	50	50	ENSMUST00000174867.8	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134324467	134340527	-	134324467	134343042	A5SS	0.2	50	50	ENSMUST00000174867.8	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134324467	134340527	-	134324467;134335581	134335386;134340527	ES	0.5	50	50	ENSMUST00000174188.8	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134318266	134322601	-	134318266	134322606	A5SS	0.5	50	50	ENSMUST00000173651.5	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134324467	134340527	-	134324467	134335386	A5SS&ES	0.2	50	50	ENSMUST00000173504.8	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134324467	134343237	-	134324467	134335386	5pMXE	0.2	50	50	ENSMUST00000174773.3	ENSMUSG00000060261.17	Gtf2i	chr5	protein_coding	general transcription factor II I
chr5	134386750	134389092	-	134386750;134387972	134387842;134389092	ES	0.5	50	50	ENSMUST00000111244.5	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134408874	134411635	-	134408874;134411440	134411384;134411635	ES	0.33	50	50	ENSMUST00000111244.5	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134414691	134417985	-	134414691;134417377	134417288;134417985	ES	0.33	50	50	ENSMUST00000111244.5	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134419784	134424471	-	134419784;134421274	134421249;134424471	ES	0.33	50	50	ENSMUST00000111244.5	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134446035	134485363	-	134446035	134484966	5pMXE	0.33	50	50	ENSMUST00000111244.5	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134392833;134395749	134395690;134404961	-	134392833	134404961	cassetteExon	0.5	100	100	ENSMUST00000111244.5	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134392833;134395770	134395690;134404961	-	134392833	134404961	cassetteExon	0.5	100	100	ENSMUST00000111244.5	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134411539	134411635	-	134411440	134411635	A3SS	0.33	50	50	ENSMUST00000111244.5	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134414691	134417281	-	134414691	134417288	A5SS	0.33	50	50	ENSMUST00000111244.5	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134446035	134484749	-	134446035	134484966	A5SS	0.33	50	50	ENSMUST00000111244.5	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134446035	134484749	-	134446035	134485363	A5SS	0.33	50	50	ENSMUST00000171794.9	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134395749	134404961	-	134395770	134404961	A3SS	0.33	50	50	ENSMUST00000073161.12	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134386750;134387972	134387842;134391365	-	134386750;134390600	134389092;134391365	MXE	0.5	100	100	ENSMUST00000202104.4	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134389129;134392228	134392036;134392756	-	134389129;134390000	134389808;134392756	MXE	0.5	100	100	ENSMUST00000167084.9	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134387972	134391365	-	134387972	134389092	A5SS&ES	0.5	50	50	ENSMUST00000167084.9	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134390000	134390523	-	134390000	134392756	A5SS	0.5	50	50	ENSMUST00000167084.9	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134387972;134391402	134391365;134392036	-	134387972;134389129	134389092;134392036	MXE	0.5	100	100	ENSMUST00000200944.4	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134386750;134389129	134389092;134392036	-	134386750;134391402	134387842;134392036	MXE	0.5	100	100	ENSMUST00000202280.4	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134390000	134392756	-	134392228	134392756	A3SS&ES	0.5	50	50	ENSMUST00000202280.4	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134390600	134391365	-	134387972	134391365	A3SS	0.5	50	50	ENSMUST00000202280.4	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134405931	134408791	-	134392833	134408791	A3SS	0.5	50	50	ENSMUST00000100654.10	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134392833	134395690	-	134392833	134408791	A5SS	0.33	50	50	ENSMUST00000100654.10	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134392833	134404961	-	134392833	134408791	A5SS	0.33	50	50	ENSMUST00000100654.10	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134408874;134411539	134411384;134411635	-	134408874	134411635	cassetteExon	0.5	100	100	ENSMUST00000111245.9	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134386750	134389092	-	134387972	134389092	3pMXE	0.5	50	50	ENSMUST00000074114.12	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134389129	134392036	-	134389129	134389808	5pMXE	0.5	50	50	ENSMUST00000201608.2	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134412777	134417985	-	134412777	134413873	5pMXE	0.5	50	50	ENSMUST00000202321.4	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134389129	134392036	-	134391402	134392036	3pMXE	0.5	50	50	ENSMUST00000202268.4	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134414691	134417985	-	134414691	134417288	5pMXE	0.33	50	50	ENSMUST00000202165.4	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134408874	134411635	-	134411440	134411635	3pMXE	0.33	50	50	ENSMUST00000200798.4	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134414691	134417985	-	134414691;134417377	134417281;134417985	ES	0.33	50	50	ENSMUST00000200798.4	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134414691;134417377	134417281;134424471	-	134414691;134421274	134417985;134424471	MXE	0.5	100	100	ENSMUST00000201441.4	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134414691;134417377	134417288;134424471	-	134414691;134421274	134417985;134424471	MXE	0.5	100	100	ENSMUST00000201441.4	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134419784	134424471	-	134417377	134424471	A3SS	0.33	50	50	ENSMUST00000201526.4	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134421274	134424471	-	134417377	134424471	A3SS	0.33	50	50	ENSMUST00000201526.4	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134417377	134417985	-	134417377	134424471	A5SS	0.5	50	50	ENSMUST00000201526.4	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134414691	134417985	-	134412777	134417985	A3SS	0.33	50	50	ENSMUST00000201447.4	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134417377	134417985	-	134412777	134417985	A3SS	0.33	50	50	ENSMUST00000201447.4	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134432675;134433820	134433510;134443989	-	134432675;134439963	134439808;134443989	MXE	0.5	100	100	ENSMUST00000201704.2	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134438164	134439808	-	134432675	134439808	A3SS	0.5	50	50	ENSMUST00000201704.2	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134439963	134443989	-	134433820	134443989	A3SS	0.5	50	50	ENSMUST00000202414.4	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134433820	134437981	-	134433820	134443989	A5SS	0.5	50	50	ENSMUST00000202414.4	ENSMUSG00000023079.15	Gtf2ird1	chr5	protein_coding	general transcription factor II I repeat domain-containing 1
chr5	134532315;134533692	134533588;134539017	-	134532315	134539017	cassetteExon	0.5	100	100	ENSMUST00000036999.10	ENSMUSG00000063146.12	Clip2	chr5	protein_coding	CAP-GLY domain containing linker protein 2
chr5	134585502	134587040	+	134581223	134587040	A5SS	0.5	50	50	ENSMUST00000202523.2	ENSMUSG00000107090.2	Gm42884	chr5	lncRNA	predicted gene 42884
chr5	134611740	134615752	+	134610474	134615752	A5SS	0.5	50	50	ENSMUST00000202761.4	ENSMUSG00000023104.10	Rfc2	chr5	protein_coding	replication factor C (activator 1) 2
chr5	134623128	134624073	+	134623128	134624137	A3SS	0.5	50	50	ENSMUST00000023867.8	ENSMUSG00000023104.10	Rfc2	chr5	protein_coding	replication factor C (activator 1) 2
chr5	134620454	134622043	+	134620073	134622043	A5SS	0.5	50	50	ENSMUST00000023867.8	ENSMUSG00000023104.10	Rfc2	chr5	protein_coding	replication factor C (activator 1) 2
chr5	134634816	134635414	-	134634816;134635246	134635215;134635414	ES	0.5	50	50	ENSMUST00000077636.8	ENSMUSG00000040751.13	Lat2	chr5	protein_coding	linker for activation of T cells family, member 2
chr5	134634816;134634935	134634900;134635215	-	134634816	134635215	cassetteExon	0.5	100	100	ENSMUST00000077636.8	ENSMUSG00000040751.13	Lat2	chr5	protein_coding	linker for activation of T cells family, member 2
chr5	134634816;134634947	134634900;134635215	-	134634816	134635215	cassetteExon	0.5	100	100	ENSMUST00000077636.8	ENSMUSG00000040751.13	Lat2	chr5	protein_coding	linker for activation of T cells family, member 2
chr5	134629754	134631415	-	134629827	134631415	A3SS	0.5	50	50	ENSMUST00000077636.8	ENSMUSG00000040751.13	Lat2	chr5	protein_coding	linker for activation of T cells family, member 2
chr5	134633609	134635215	-	134634816	134635215	A3SS&ES	0.25	50	50	ENSMUST00000077636.8	ENSMUSG00000040751.13	Lat2	chr5	protein_coding	linker for activation of T cells family, member 2
chr5	134633655	134634598	-	134633655	134634786	A5SS	0.5	50	50	ENSMUST00000077636.8	ENSMUSG00000040751.13	Lat2	chr5	protein_coding	linker for activation of T cells family, member 2
chr5	134633609	134635215	-	134634935	134635215	A3SS&ES	0.25	50	50	ENSMUST00000036362.13	ENSMUSG00000040751.13	Lat2	chr5	protein_coding	linker for activation of T cells family, member 2
chr5	134634947	134635215	-	134634935	134635215	A3SS	0.25	50	50	ENSMUST00000036362.13	ENSMUSG00000040751.13	Lat2	chr5	protein_coding	linker for activation of T cells family, member 2
chr5	134634816	134635414	-	134634816	134635215	5pMXE	0.33	50	50	ENSMUST00000201632.2	ENSMUSG00000040751.13	Lat2	chr5	protein_coding	linker for activation of T cells family, member 2
chr5	134634816	134635414	-	134635246	134635414	A3SS&ES	0.5	50	50	ENSMUST00000200737.4	ENSMUSG00000040751.13	Lat2	chr5	protein_coding	linker for activation of T cells family, member 2
chr5	134634947	134635215	-	134633609	134635215	A3SS	0.25	50	50	ENSMUST00000200737.4	ENSMUSG00000040751.13	Lat2	chr5	protein_coding	linker for activation of T cells family, member 2
chr5	134634816;134635246	134634900;134635414	-	134634816	134635414	cassetteExon	0.5	100	100	ENSMUST00000202461.4	ENSMUSG00000040751.13	Lat2	chr5	protein_coding	linker for activation of T cells family, member 2
chr5	134650940	134654220	-	134650940;134653354	134653295;134654220	ES	0.5	50	50	ENSMUST00000202622.4	ENSMUSG00000040731.14	Eif4h	chr5	protein_coding	eukaryotic translation initiation factor 4H
chr5	134650940	134654220	-	134653354	134654220	3pMXE	0.5	50	50	ENSMUST00000202289.4	ENSMUSG00000040731.14	Eif4h	chr5	protein_coding	eukaryotic translation initiation factor 4H
chr5	134688857;134690407	134690243;134690647	-	134688857	134690647	cassetteExon	0.5	100	100	ENSMUST00000015137.10	ENSMUSG00000029674.14	Limk1	chr5	protein_coding	LIM-domain containing, protein kinase
chr5	134691011	134693039	-	134691016	134693039	A3SS	0.5	50	50	ENSMUST00000015137.10	ENSMUSG00000029674.14	Limk1	chr5	protein_coding	LIM-domain containing, protein kinase
chr5	134688857	134689598	-	134688857	134690647	A5SS	0.33	50	50	ENSMUST00000015137.10	ENSMUSG00000029674.14	Limk1	chr5	protein_coding	LIM-domain containing, protein kinase
chr5	134702004	134706969	-	134702004	134715498	A5SS	0.5	50	50	ENSMUST00000015137.10	ENSMUSG00000029674.14	Limk1	chr5	protein_coding	LIM-domain containing, protein kinase
chr5	134688857	134690243	-	134688857;134689749	134689598;134690243	ES	0.5	50	50	ENSMUST00000134093.2	ENSMUSG00000029674.14	Limk1	chr5	protein_coding	LIM-domain containing, protein kinase
chr5	134930835	134931431	-	134930749	134931431	A3SS	0.5	50	50	ENSMUST00000201316.4	ENSMUSG00000040576.9	Tmem270	chr5	protein_coding	transmembrane protein 270
chr5	134963278	134969311	+	134963278;134964725	134964633;134969311	ES	0.5	50	50	ENSMUST00000047196.14	ENSMUSG00000040557.15	Mettl27	chr5	protein_coding	methyltransferase like 27
chr5	134961264	134961575	+	134961264	134961476	A3SS	0.5	50	50	ENSMUST00000047196.14	ENSMUSG00000040557.15	Mettl27	chr5	protein_coding	methyltransferase like 27
chr5	134964725	134964939	+	134964725	134969311	A3SS	0.5	50	50	ENSMUST00000047196.14	ENSMUSG00000040557.15	Mettl27	chr5	protein_coding	methyltransferase like 27
chr5	134961302	134961476	+	134961264	134961476	A5SS	0.5	50	50	ENSMUST00000047196.14	ENSMUSG00000040557.15	Mettl27	chr5	protein_coding	methyltransferase like 27
chr5	134961435	134961575	+	134961264	134961575	A5SS	0.5	50	50	ENSMUST00000111219.8	ENSMUSG00000040557.15	Mettl27	chr5	protein_coding	methyltransferase like 27
chr5	135039914	135040095	+	135039914	135040064	A3SS	0.5	50	50	ENSMUST00000111216.8	ENSMUSG00000040532.15	Abhd11	chr5	protein_coding	abhydrolase domain containing 11
chr5	135038693	135038836	+	135038069	135038836	A5SS	0.5	50	50	ENSMUST00000111216.8	ENSMUSG00000040532.15	Abhd11	chr5	protein_coding	abhydrolase domain containing 11
chr5	135038693	135038865	+	135038693	135038836	A3SS	0.5	50	50	ENSMUST00000046999.12	ENSMUSG00000040532.15	Abhd11	chr5	protein_coding	abhydrolase domain containing 11
chr5	135066429	135070785	+	135066429;135070165	135070091;135070785	ES	0.5	50	50	ENSMUST00000005509.11	ENSMUSG00000007207.11	Stx1a	chr5	protein_coding	syntaxin 1A (brain)
chr5	135074588	135077565	+	135074588	135077848	A3SS	0.33	50	50	ENSMUST00000005509.11	ENSMUSG00000007207.11	Stx1a	chr5	protein_coding	syntaxin 1A (brain)
chr5	135074588	135077765	+	135074588	135077848	A3SS	0.33	50	50	ENSMUST00000005509.11	ENSMUSG00000007207.11	Stx1a	chr5	protein_coding	syntaxin 1A (brain)
chr5	135074588	135077565	+	135074588	135077765	A3SS	0.33	50	50	ENSMUST00000150838.2	ENSMUSG00000007207.11	Stx1a	chr5	protein_coding	syntaxin 1A (brain)
chr5	135074712	135077765	+	135074588	135077765	A5SS	0.5	50	50	ENSMUST00000150838.2	ENSMUSG00000007207.11	Stx1a	chr5	protein_coding	syntaxin 1A (brain)
chr5	135066429	135070785	+	135070165	135070785	5pMXE	0.5	50	50	ENSMUST00000156626.8	ENSMUSG00000007207.11	Stx1a	chr5	protein_coding	syntaxin 1A (brain)
chr5	135082492	135084882	-	135082576	135084882	A3SS	0.5	50	50	ENSMUST00000129691.8	ENSMUSG00000005378.18	Bud23	chr5	protein_coding	BUD23, rRNA methyltransferase and ribosome maturation factor
chr5	135082492	135085696	-	135085238	135085696	A3SS&ES	0.5	50	50	ENSMUST00000129691.8	ENSMUSG00000005378.18	Bud23	chr5	protein_coding	BUD23, rRNA methyltransferase and ribosome maturation factor
chr5	135089684	135090103	-	135089684;135090009	135089927;135090103	ES	0.5	50	50	ENSMUST00000085984.11	ENSMUSG00000005378.18	Bud23	chr5	protein_coding	BUD23, rRNA methyltransferase and ribosome maturation factor
chr5	135085781	135086466	-	135085781	135086474	A5SS	0.5	50	50	ENSMUST00000085984.11	ENSMUSG00000005378.18	Bud23	chr5	protein_coding	BUD23, rRNA methyltransferase and ribosome maturation factor
chr5	135090198	135092514	-	135090198	135092738	A5SS	0.25	50	50	ENSMUST00000085984.11	ENSMUSG00000005378.18	Bud23	chr5	protein_coding	BUD23, rRNA methyltransferase and ribosome maturation factor
chr5	135090198	135092702	-	135090198	135092738	A5SS	0.25	50	50	ENSMUST00000085984.11	ENSMUSG00000005378.18	Bud23	chr5	protein_coding	BUD23, rRNA methyltransferase and ribosome maturation factor
chr5	135082492;135085238	135084882;135085696	-	135082492	135085696	cassetteExon	0.5	100	100	ENSMUST00000111205.8	ENSMUSG00000005378.18	Bud23	chr5	protein_coding	BUD23, rRNA methyltransferase and ribosome maturation factor
chr5	135090198;135093029	135092702;135093378	-	135090198	135093378	cassetteExon	0.5	100	100	ENSMUST00000071677.10	ENSMUSG00000005378.18	Bud23	chr5	protein_coding	BUD23, rRNA methyltransferase and ribosome maturation factor
chr5	135090198;135093029	135092738;135093378	-	135090198	135093378	cassetteExon	0.5	100	100	ENSMUST00000071677.10	ENSMUSG00000005378.18	Bud23	chr5	protein_coding	BUD23, rRNA methyltransferase and ribosome maturation factor
chr5	135090198	135092514	-	135090198	135093378	A5SS	0.25	50	50	ENSMUST00000071677.10	ENSMUSG00000005378.18	Bud23	chr5	protein_coding	BUD23, rRNA methyltransferase and ribosome maturation factor
chr5	135082492	135085696	-	135082492	135084882	5pMXE	0.5	50	50	ENSMUST00000147756.8	ENSMUSG00000005378.18	Bud23	chr5	protein_coding	BUD23, rRNA methyltransferase and ribosome maturation factor
chr5	135090198	135092702	-	135090198	135092514	5pMXE	0.25	50	50	ENSMUST00000148549.2	ENSMUSG00000005378.18	Bud23	chr5	protein_coding	BUD23, rRNA methyltransferase and ribosome maturation factor
chr5	135090198	135093378	-	135093029	135093378	3pMXE	0.5	50	50	ENSMUST00000201554.2	ENSMUSG00000005378.18	Bud23	chr5	protein_coding	BUD23, rRNA methyltransferase and ribosome maturation factor
chr5	135105483	135106916	-	135102837	135106916	A3SS	0.5	50	50	ENSMUST00000076203.3	ENSMUSG00000043614.14	Vps37d	chr5	protein_coding	vacuolar protein sorting 37D
chr5	135102837	135103248	-	135102837	135106916	A5SS	0.5	50	50	ENSMUST00000076203.3	ENSMUSG00000043614.14	Vps37d	chr5	protein_coding	vacuolar protein sorting 37D
chr5	135136069	135142481	+	135118914	135142481	A5SS	0.5	50	50	ENSMUST00000202431.4	ENSMUSG00000005373.14	Mlxipl	chr5	protein_coding	MLX interacting protein-like
chr5	135161715	135161935	+	135161715	135161930	A3SS	0.33	50	50	ENSMUST00000142385.8	ENSMUSG00000005373.14	Mlxipl	chr5	protein_coding	MLX interacting protein-like
chr5	135161715	135161963	+	135161715	135161930	A3SS	0.33	50	50	ENSMUST00000142385.8	ENSMUSG00000005373.14	Mlxipl	chr5	protein_coding	MLX interacting protein-like
chr5	135162727	135162801	+	135162727	135162848	A3SS	0.33	50	50	ENSMUST00000142385.8	ENSMUSG00000005373.14	Mlxipl	chr5	protein_coding	MLX interacting protein-like
chr5	135162727	135162808	+	135162727	135162848	A3SS	0.33	50	50	ENSMUST00000142385.8	ENSMUSG00000005373.14	Mlxipl	chr5	protein_coding	MLX interacting protein-like
chr5	135161715	135161935	+	135161715	135161963	A3SS	0.33	50	50	ENSMUST00000153519.8	ENSMUSG00000005373.14	Mlxipl	chr5	protein_coding	MLX interacting protein-like
chr5	135162727	135162801	+	135162727	135162808	A3SS	0.33	50	50	ENSMUST00000153519.8	ENSMUSG00000005373.14	Mlxipl	chr5	protein_coding	MLX interacting protein-like
chr5	135183352	135186386	+	135183352;135185373	135185222;135186386	ES	0.5	50	50	ENSMUST00000153183.8	ENSMUSG00000005374.14	Tbl2	chr5	protein_coding	transducin (beta)-like 2
chr5	135178718;135178993	135178844;135181789	+	135178718	135181789	cassetteExon	0.5	100	100	ENSMUST00000153183.8	ENSMUSG00000005374.14	Tbl2	chr5	protein_coding	transducin (beta)-like 2
chr5	135178718	135181794	+	135178718	135181789	A3SS	0.33	50	50	ENSMUST00000153183.8	ENSMUSG00000005374.14	Tbl2	chr5	protein_coding	transducin (beta)-like 2
chr5	135178718	135181794	+	135178718	135178844	A3SS&ES	0.33	50	50	ENSMUST00000139565.8	ENSMUSG00000005374.14	Tbl2	chr5	protein_coding	transducin (beta)-like 2
chr5	135206079	135209370	+	135206079;135208974	135208804;135209370	ES	0.5	50	50	ENSMUST00000031692.12	ENSMUSG00000029681.13	Bcl7b	chr5	protein_coding	B cell CLL/lymphoma 7B
chr5	135200016	135202025	+	135200016	135205983	A3SS	0.5	50	50	ENSMUST00000031692.12	ENSMUSG00000029681.13	Bcl7b	chr5	protein_coding	B cell CLL/lymphoma 7B
chr5	135197420	135199941	+	135197452	135199941	A5SS	0.5	50	50	ENSMUST00000031692.12	ENSMUSG00000029681.13	Bcl7b	chr5	protein_coding	B cell CLL/lymphoma 7B
chr5	135206079	135209370	+	135208974	135209370	5pMXE	0.5	50	50	ENSMUST00000145329.2	ENSMUSG00000029681.13	Bcl7b	chr5	protein_coding	B cell CLL/lymphoma 7B
chr5	135368970;135373622	135373503;135374944	-	135368970	135374944	cassetteExon	0.5	100	100	ENSMUST00000201791.4	ENSMUSG00000040013.12	Fkbp6	chr5	protein_coding	FK506 binding protein 6
chr5	135378589	135378673	-	135378589	135378789	A5SS	0.5	50	50	ENSMUST00000201791.4	ENSMUSG00000040013.12	Fkbp6	chr5	protein_coding	FK506 binding protein 6
chr5	135392812	135392907	+	135392812	135392904	A3SS	0.5	50	50	ENSMUST00000111180.9	ENSMUSG00000053388.11	Trim50	chr5	protein_coding	tripartite motif-containing 50
chr5	135399167	135400073	+	135399167	135400095	A3SS	0.33	50	50	ENSMUST00000000940.15	ENSMUSG00000000916.16	Nsun5	chr5	protein_coding	NOL1/NOP2/Sun domain family, member 5
chr5	135400269	135400360	+	135400269	135400352	A3SS	0.5	50	50	ENSMUST00000000940.15	ENSMUSG00000000916.16	Nsun5	chr5	protein_coding	NOL1/NOP2/Sun domain family, member 5
chr5	135403919	135404129	+	135403959	135404129	A5SS	0.5	50	50	ENSMUST00000000940.15	ENSMUSG00000000916.16	Nsun5	chr5	protein_coding	NOL1/NOP2/Sun domain family, member 5
chr5	135399167	135402808	+	135399167	135400073	3pMXE	0.33	50	50	ENSMUST00000127746.2	ENSMUSG00000000916.16	Nsun5	chr5	protein_coding	NOL1/NOP2/Sun domain family, member 5
chr5	135399167;135400460	135400073;135402808	+	135399167	135402808	cassetteExon	0.5	100	100	ENSMUST00000170342.5	ENSMUSG00000000916.16	Nsun5	chr5	protein_coding	NOL1/NOP2/Sun domain family, member 5
chr5	135399167;135400460	135400095;135402808	+	135399167	135402808	cassetteExon	0.5	100	100	ENSMUST00000170342.5	ENSMUSG00000000916.16	Nsun5	chr5	protein_coding	NOL1/NOP2/Sun domain family, member 5
chr5	135480489	135481177	-	135480489	135481654	A5SS	0.5	50	50	ENSMUST00000060311.12	ENSMUSG00000039959.14	Hip1	chr5	protein_coding	huntingtin interacting protein 1
chr5	135489324	135493984	-	135489324	135573791	A5SS	0.33	50	50	ENSMUST00000060311.12	ENSMUSG00000039959.14	Hip1	chr5	protein_coding	huntingtin interacting protein 1
chr5	135489324	135517935	-	135489324	135573791	A5SS	0.33	50	50	ENSMUST00000060311.12	ENSMUSG00000039959.14	Hip1	chr5	protein_coding	huntingtin interacting protein 1
chr5	135465363	135467389	-	135461996	135467389	A3SS	0.5	50	50	ENSMUST00000200808.2	ENSMUSG00000039959.14	Hip1	chr5	protein_coding	huntingtin interacting protein 1
chr5	135461996	135463095	-	135461996	135467389	A5SS	0.5	50	50	ENSMUST00000200808.2	ENSMUSG00000039959.14	Hip1	chr5	protein_coding	huntingtin interacting protein 1
chr5	135489324	135493984	-	135489324	135517935	A5SS	0.33	50	50	ENSMUST00000201998.2	ENSMUSG00000039959.14	Hip1	chr5	protein_coding	huntingtin interacting protein 1
chr5	135661772;135664077	135663958;135664849	+	135661772	135664849	cassetteExon	0.5	100	100	ENSMUST00000043707.7	ENSMUSG00000039917.11	Rhbdd2	chr5	protein_coding	rhomboid domain containing 2
chr5	135661772	135666327	+	135661772	135664849	A3SS&ES	0.33	50	50	ENSMUST00000043707.7	ENSMUSG00000039917.11	Rhbdd2	chr5	protein_coding	rhomboid domain containing 2
chr5	135668094	135669102	+	135668094	135671884	A3SS	0.5	50	50	ENSMUST00000043707.7	ENSMUSG00000039917.11	Rhbdd2	chr5	protein_coding	rhomboid domain containing 2
chr5	135661772	135666327	+	135661772	135663958	A3SS&ES	0.33	50	50	ENSMUST00000136748.6	ENSMUSG00000039917.11	Rhbdd2	chr5	protein_coding	rhomboid domain containing 2
chr5	135661772	135664849	+	135661772	135663958	3pMXE	0.33	50	50	ENSMUST00000144633.2	ENSMUSG00000039917.11	Rhbdd2	chr5	protein_coding	rhomboid domain containing 2
chr5	135661772	135664849	+	135664077	135664849	5pMXE	0.5	50	50	ENSMUST00000199368.2	ENSMUSG00000039917.11	Rhbdd2	chr5	protein_coding	rhomboid domain containing 2
chr5	135703515	135744726	+	135698970	135744726	A5SS	0.33	50	50	ENSMUST00000153500.8	ENSMUSG00000005514.15	Por	chr5	protein_coding	P450 (cytochrome) oxidoreductase
chr5	135718106	135744726	+	135698970	135744726	A5SS	0.33	50	50	ENSMUST00000153500.8	ENSMUSG00000005514.15	Por	chr5	protein_coding	P450 (cytochrome) oxidoreductase
chr5	135754895	135757516	+	135744917	135757516	A5SS	0.5	50	50	ENSMUST00000153500.8	ENSMUSG00000005514.15	Por	chr5	protein_coding	P450 (cytochrome) oxidoreductase
chr5	135703515	135744726	+	135703515	135713574	3pMXE	0.5	50	50	ENSMUST00000150058.2	ENSMUSG00000005514.15	Por	chr5	protein_coding	P450 (cytochrome) oxidoreductase
chr5	135718106	135744726	+	135703515	135744726	A5SS	0.33	50	50	ENSMUST00000153515.8	ENSMUSG00000005514.15	Por	chr5	protein_coding	P450 (cytochrome) oxidoreductase
chr5	135771172	135772902	-	135771253	135772902	A3SS	0.5	50	50	ENSMUST00000043378.9	ENSMUSG00000039886.9	Tmem120a	chr5	protein_coding	transmembrane protein 120A
chr5	135765689	135765772	-	135764819	135765772	A3SS	0.5	50	50	ENSMUST00000199952.5	ENSMUSG00000039886.9	Tmem120a	chr5	protein_coding	transmembrane protein 120A
chr5	135764819	135764924	-	135764819	135765772	A5SS	0.5	50	50	ENSMUST00000199952.5	ENSMUSG00000039886.9	Tmem120a	chr5	protein_coding	transmembrane protein 120A
chr5	135784358	135787983	-	135784358;135785998	135785853;135787983	ES	0.5	50	50	ENSMUST00000053906.11	ENSMUSG00000019178.18	Styxl1	chr5	protein_coding	serine/threonine/tyrosine interacting-like 1
chr5	135788128	135797708	-	135788128;135794670	135794505;135797708	ES	0.5	50	50	ENSMUST00000053906.11	ENSMUSG00000019178.18	Styxl1	chr5	protein_coding	serine/threonine/tyrosine interacting-like 1
chr5	135799216	135807105	-	135799216	135807028	5pMXE	0.5	50	50	ENSMUST00000053906.11	ENSMUSG00000019178.18	Styxl1	chr5	protein_coding	serine/threonine/tyrosine interacting-like 1
chr5	135799213	135807028	-	135799216	135807028	A3SS	0.5	50	50	ENSMUST00000053906.11	ENSMUSG00000019178.18	Styxl1	chr5	protein_coding	serine/threonine/tyrosine interacting-like 1
chr5	135799213	135807105	-	135799216	135807105	A3SS	0.5	50	50	ENSMUST00000178515.8	ENSMUSG00000019178.18	Styxl1	chr5	protein_coding	serine/threonine/tyrosine interacting-like 1
chr5	135799257	135807082	-	135799213	135807082	A3SS	0.5	50	50	ENSMUST00000177559.8	ENSMUSG00000019178.18	Styxl1	chr5	protein_coding	serine/threonine/tyrosine interacting-like 1
chr5	135799213	135807028	-	135799213	135807082	A5SS	0.33	50	50	ENSMUST00000177559.8	ENSMUSG00000019178.18	Styxl1	chr5	protein_coding	serine/threonine/tyrosine interacting-like 1
chr5	135799213	135807105	-	135799213	135807082	A5SS&ES	0.33	50	50	ENSMUST00000177559.8	ENSMUSG00000019178.18	Styxl1	chr5	protein_coding	serine/threonine/tyrosine interacting-like 1
chr5	135799213	135807105	-	135799213	135807028	A5SS	0.33	50	50	ENSMUST00000111163.9	ENSMUSG00000019178.18	Styxl1	chr5	protein_coding	serine/threonine/tyrosine interacting-like 1
chr5	135784358	135787983	-	135785998	135787983	3pMXE	0.5	50	50	ENSMUST00000178796.2	ENSMUSG00000019178.18	Styxl1	chr5	protein_coding	serine/threonine/tyrosine interacting-like 1
chr5	135807655	135813038	+	135807655;135812327	135812159;135813038	ES	0.5	50	50	ENSMUST00000019323.11	ENSMUSG00000019179.11	Mdh2	chr5	protein_coding	malate dehydrogenase 2, NAD (mitochondrial)
chr5	135812327	135814783	+	135812327;135813121	135813038;135814783	ES	0.5	50	50	ENSMUST00000019323.11	ENSMUSG00000019179.11	Mdh2	chr5	protein_coding	malate dehydrogenase 2, NAD (mitochondrial)
chr5	135807655	135812228	+	135807655	135812159	A3SS	0.33	50	50	ENSMUST00000019323.11	ENSMUSG00000019179.11	Mdh2	chr5	protein_coding	malate dehydrogenase 2, NAD (mitochondrial)
chr5	135807655;135812327	135812159;135814783	+	135807655;135813121	135813038;135814783	MXE	0.5	100	100	ENSMUST00000138101.2	ENSMUSG00000019179.11	Mdh2	chr5	protein_coding	malate dehydrogenase 2, NAD (mitochondrial)
chr5	135807655;135812327	135812228;135813038	+	135807655	135813038	cassetteExon	0.5	100	100	ENSMUST00000138101.2	ENSMUSG00000019179.11	Mdh2	chr5	protein_coding	malate dehydrogenase 2, NAD (mitochondrial)
chr5	135807655;135812327	135812228;135814783	+	135807655;135813121	135813038;135814783	MXE	0.5	100	100	ENSMUST00000138101.2	ENSMUSG00000019179.11	Mdh2	chr5	protein_coding	malate dehydrogenase 2, NAD (mitochondrial)
chr5	135812327	135814783	+	135812327	135813038	3pMXE	0.5	50	50	ENSMUST00000130795.2	ENSMUSG00000019179.11	Mdh2	chr5	protein_coding	malate dehydrogenase 2, NAD (mitochondrial)
chr5	135807655	135813038	+	135807655	135812159	3pMXE	0.33	50	50	ENSMUST00000143747.2	ENSMUSG00000019179.11	Mdh2	chr5	protein_coding	malate dehydrogenase 2, NAD (mitochondrial)
chr5	135847470	135863894	+	135835894	135863894	A5SS	0.5	50	50	ENSMUST00000146038.2	ENSMUSG00000039860.20	Srrm3	chr5	protein_coding	serine/arginine repetitive matrix 3
chr5	135886069	135897027	+	135886069;135896000	135895981;135897027	ES	0.5	50	50	ENSMUST00000013615.14	ENSMUSG00000039860.20	Srrm3	chr5	protein_coding	serine/arginine repetitive matrix 3
chr5	135886069	135897027	+	135896000	135897027	5pMXE	0.5	50	50	ENSMUST00000150566.2	ENSMUSG00000039860.20	Srrm3	chr5	protein_coding	serine/arginine repetitive matrix 3
chr5	135959803	135963177	-	135940505	135963177	A3SS	0.33	50	50	ENSMUST00000198270.2	ENSMUSG00000051391.10	Ywhag	chr5	protein_coding	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
chr5	135961496	135963177	-	135940505	135963177	A3SS	0.33	50	50	ENSMUST00000198270.2	ENSMUSG00000051391.10	Ywhag	chr5	protein_coding	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
chr5	135959803	135963177	-	135961496	135963177	A3SS	0.33	50	50	ENSMUST00000129581.2	ENSMUSG00000051391.10	Ywhag	chr5	protein_coding	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
chr5	135959803	135963177	-	135959803;135961496	135961371;135963177	ES	0.5	50	50	ENSMUST00000126639.2	ENSMUSG00000051391.10	Ywhag	chr5	protein_coding	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
chr5	135993550	135994929	-	135993550;135994739	135994425;135994929	ES	0.5	50	50	ENSMUST00000111153.8	ENSMUSG00000029699.14	Ssc4d	chr5	protein_coding	scavenger receptor cysteine rich family, 4 domains
chr5	135992302	135993473	-	135992284	135993473	A3SS	0.5	50	50	ENSMUST00000111153.8	ENSMUSG00000029699.14	Ssc4d	chr5	protein_coding	scavenger receptor cysteine rich family, 4 domains
chr5	135999280	136003116	-	135999234	136003116	A3SS	0.33	50	50	ENSMUST00000111153.8	ENSMUSG00000029699.14	Ssc4d	chr5	protein_coding	scavenger receptor cysteine rich family, 4 domains
chr5	135999319	136003116	-	135999234	136003116	A3SS	0.33	50	50	ENSMUST00000111153.8	ENSMUSG00000029699.14	Ssc4d	chr5	protein_coding	scavenger receptor cysteine rich family, 4 domains
chr5	135990062	135991054	-	135990062	135990743	A5SS&ES	0.5	50	50	ENSMUST00000111153.8	ENSMUSG00000029699.14	Ssc4d	chr5	protein_coding	scavenger receptor cysteine rich family, 4 domains
chr5	135990820	135991054	-	135990820	135991777	A5SS	0.5	50	50	ENSMUST00000111153.8	ENSMUSG00000029699.14	Ssc4d	chr5	protein_coding	scavenger receptor cysteine rich family, 4 domains
chr5	135999319	136003116	-	135999280	136003116	A3SS	0.33	50	50	ENSMUST00000111152.8	ENSMUSG00000029699.14	Ssc4d	chr5	protein_coding	scavenger receptor cysteine rich family, 4 domains
chr5	135990062	135991054	-	135990062;135990820	135990743;135991054	ES	0.5	50	50	ENSMUST00000054895.4	ENSMUSG00000029699.14	Ssc4d	chr5	protein_coding	scavenger receptor cysteine rich family, 4 domains
chr5	135993550	135994929	-	135993550	135994425	5pMXE	0.5	50	50	ENSMUST00000153823.8	ENSMUSG00000029699.14	Ssc4d	chr5	protein_coding	scavenger receptor cysteine rich family, 4 domains
chr5	136011611	136013202	+	136011611;136013119	136013016;136013202	ES	0.5	50	50	ENSMUST00000005073.13	ENSMUSG00000004948.13	Zp3	chr5	protein_coding	zona pellucida glycoprotein 3
chr5	136023820	136038868	+	136023820;136025306	136025144;136038868	ES	0.5	50	50	ENSMUST00000111142.9	ENSMUSG00000004947.16	Dtx2	chr5	protein_coding	deltex 2, E3 ubiquitin ligase
chr5	136050712	136057353	+	136050712;136055461	136055324;136057353	ES	0.5	50	50	ENSMUST00000111142.9	ENSMUSG00000004947.16	Dtx2	chr5	protein_coding	deltex 2, E3 ubiquitin ligase
chr5	136023820;136024178	136024095;136025144	+	136023820	136025144	cassetteExon	0.5	100	100	ENSMUST00000111142.9	ENSMUSG00000004947.16	Dtx2	chr5	protein_coding	deltex 2, E3 ubiquitin ligase
chr5	136023820;136024178	136024101;136025144	+	136023820	136025144	cassetteExon	0.5	100	100	ENSMUST00000111142.9	ENSMUSG00000004947.16	Dtx2	chr5	protein_coding	deltex 2, E3 ubiquitin ligase
chr5	136050712;136052597	136052523;136055324	+	136050712	136055324	cassetteExon	0.5	100	100	ENSMUST00000111142.9	ENSMUSG00000004947.16	Dtx2	chr5	protein_coding	deltex 2, E3 ubiquitin ligase
chr5	136055461	136057356	+	136055461	136057353	A3SS	0.5	50	50	ENSMUST00000111142.9	ENSMUSG00000004947.16	Dtx2	chr5	protein_coding	deltex 2, E3 ubiquitin ligase
chr5	136050712	136052523	+	136050712	136057353	A3SS	0.33	50	50	ENSMUST00000111145.10	ENSMUSG00000004947.16	Dtx2	chr5	protein_coding	deltex 2, E3 ubiquitin ligase
chr5	136023820	136024095	+	136023820	136024101	A3SS	0.25	50	50	ENSMUST00000111144.8	ENSMUSG00000004947.16	Dtx2	chr5	protein_coding	deltex 2, E3 ubiquitin ligase
chr5	136023820	136024095	+	136023820	136038868	A3SS	0.25	50	50	ENSMUST00000199239.5	ENSMUSG00000004947.16	Dtx2	chr5	protein_coding	deltex 2, E3 ubiquitin ligase
chr5	136023820	136024101	+	136023820	136038868	A3SS	0.25	50	50	ENSMUST00000199239.5	ENSMUSG00000004947.16	Dtx2	chr5	protein_coding	deltex 2, E3 ubiquitin ligase
chr5	136050712	136057353	+	136050712	136055324	A3SS&ES	0.33	50	50	ENSMUST00000005072.10	ENSMUSG00000004947.16	Dtx2	chr5	protein_coding	deltex 2, E3 ubiquitin ligase
chr5	136023820	136025144	+	136024178	136025144	5pMXE	0.5	50	50	ENSMUST00000140146.2	ENSMUSG00000004947.16	Dtx2	chr5	protein_coding	deltex 2, E3 ubiquitin ligase
chr5	136088737;136089135	136088916;136090037	+	136088737	136090037	cassetteExon	0.5	100	100	ENSMUST00000139999.8	ENSMUSG00000006143.13	Upk3bl	chr5	protein_coding	uroplakin 3B-like
chr5	136090481;136092834	136092740;136092926	+	136090481	136092926	cassetteExon	0.5	100	100	ENSMUST00000139999.8	ENSMUSG00000006143.13	Upk3bl	chr5	protein_coding	uroplakin 3B-like
chr5	136090481	136092929	+	136090481	136092926	A3SS	0.33	50	50	ENSMUST00000139999.8	ENSMUSG00000006143.13	Upk3bl	chr5	protein_coding	uroplakin 3B-like
chr5	136086339	136088585	+	136083418	136088585	A5SS	0.5	50	50	ENSMUST00000139999.8	ENSMUSG00000006143.13	Upk3bl	chr5	protein_coding	uroplakin 3B-like
chr5	136090481	136092740	+	136090481	136092929	A3SS	0.33	50	50	ENSMUST00000156530.8	ENSMUSG00000006143.13	Upk3bl	chr5	protein_coding	uroplakin 3B-like
chr5	136088737	136090037	+	136089135	136090037	5pMXE	0.5	50	50	ENSMUST00000139549.2	ENSMUSG00000006143.13	Upk3bl	chr5	protein_coding	uroplakin 3B-like
chr5	136129873	136130479	+	136129873;136130248	136130098;136130479	ES	0.5	50	50	ENSMUST00000042135.14	ENSMUSG00000004952.14	Rasa4	chr5	protein_coding	RAS p21 protein activator 4
chr5	136130543	136131089	+	136130543;136130911	136130799;136131089	ES	0.5	50	50	ENSMUST00000042135.14	ENSMUSG00000004952.14	Rasa4	chr5	protein_coding	RAS p21 protein activator 4
chr5	136131281	136132134	+	136131281;136131519	136131382;136132134	ES	0.5	50	50	ENSMUST00000042135.14	ENSMUSG00000004952.14	Rasa4	chr5	protein_coding	RAS p21 protein activator 4
chr5	136120663	136121999	+	136120663	136121992	A3SS	0.5	50	50	ENSMUST00000042135.14	ENSMUSG00000004952.14	Rasa4	chr5	protein_coding	RAS p21 protein activator 4
chr5	136132278	136132401	+	136132278	136132691	A3SS	0.5	50	50	ENSMUST00000042135.14	ENSMUSG00000004952.14	Rasa4	chr5	protein_coding	RAS p21 protein activator 4
chr5	136136045	136138366	+	136136045	136140106	A3SS	0.5	50	50	ENSMUST00000042135.14	ENSMUSG00000004952.14	Rasa4	chr5	protein_coding	RAS p21 protein activator 4
chr5	136115960	136118207	+	136113031	136118207	A5SS	0.5	50	50	ENSMUST00000042135.14	ENSMUSG00000004952.14	Rasa4	chr5	protein_coding	RAS p21 protein activator 4
chr5	136129873	136130479	+	136129873	136130098	A3SS	0.5	50	50	ENSMUST00000134509.8	ENSMUSG00000004952.14	Rasa4	chr5	protein_coding	RAS p21 protein activator 4
chr5	136145659	136150943	+	136145659;136148938	136148849;136150943	ES	0.5	50	50	ENSMUST00000111127.8	ENSMUSG00000039771.14	Polr2j	chr5	protein_coding	polymerase (RNA) II (DNA directed) polypeptide J
chr5	136152642	136152721	-	136152609	136152721	A3SS	0.5	50	50	ENSMUST00000006301.11	ENSMUSG00000029703.11	Lrwd1	chr5	protein_coding	leucine-rich repeats and WD repeat domain containing 1
chr5	136163614	136164726	-	136163587	136164726	A3SS	0.5	50	50	ENSMUST00000006301.11	ENSMUSG00000029703.11	Lrwd1	chr5	protein_coding	leucine-rich repeats and WD repeat domain containing 1
chr5	136162299	136162821	-	136162299	136162788	A5SS	0.5	50	50	ENSMUST00000006301.11	ENSMUSG00000029703.11	Lrwd1	chr5	protein_coding	leucine-rich repeats and WD repeat domain containing 1
chr5	136165148	136168192	+	136165148	136168316	A3SS	0.5	50	50	ENSMUST00000136634.8	ENSMUSG00000039754.11	Alkbh4	chr5	protein_coding	alkB homolog 4, lysine demethylase
chr5	136167837	136168316	+	136165148	136168316	A5SS	0.5	50	50	ENSMUST00000136634.8	ENSMUSG00000039754.11	Alkbh4	chr5	protein_coding	alkB homolog 4, lysine demethylase
chr5	136168414	136169033	+	136168389	136169033	A5SS	0.5	50	50	ENSMUST00000136634.8	ENSMUSG00000039754.11	Alkbh4	chr5	protein_coding	alkB homolog 4, lysine demethylase
chr5	136165253	136168192	+	136165148	136168192	A5SS	0.5	50	50	ENSMUST00000041100.4	ENSMUSG00000039754.11	Alkbh4	chr5	protein_coding	alkB homolog 4, lysine demethylase
chr5	136190578;136197328	136197220;136199392	-	136190578	136199392	cassetteExon	0.5	100	100	ENSMUST00000041048.6	ENSMUSG00000039747.12	Orai2	chr5	protein_coding	ORAI calcium release-activated calcium modulator 2
chr5	136190578	136196679	-	136190578	136199392	A5SS	0.33	50	50	ENSMUST00000041048.6	ENSMUSG00000039747.12	Orai2	chr5	protein_coding	ORAI calcium release-activated calcium modulator 2
chr5	136190578	136197220	-	136190578;136196741	136196679;136197220	ES	0.5	50	50	ENSMUST00000196454.5	ENSMUSG00000039747.12	Orai2	chr5	protein_coding	ORAI calcium release-activated calcium modulator 2
chr5	136190578	136199392	-	136197328	136199392	3pMXE	0.5	50	50	ENSMUST00000198268.2	ENSMUSG00000039747.12	Orai2	chr5	protein_coding	ORAI calcium release-activated calcium modulator 2
chr5	136218473	136223151	-	136218473;136220839	136220754;136223151	ES	0.5	50	50	ENSMUST00000151786.8	ENSMUSG00000039737.12	Prkrip1	chr5	protein_coding	Prkr interacting protein 1 (IL11 inducible)
chr5	136223251;136223984	136223932;136226634	-	136223251	136226634	cassetteExon	0.5	100	100	ENSMUST00000151786.8	ENSMUSG00000039737.12	Prkrip1	chr5	protein_coding	Prkr interacting protein 1 (IL11 inducible)
chr5	136223251;136224005	136223932;136226634	-	136223251	136226634	cassetteExon	0.5	100	100	ENSMUST00000151786.8	ENSMUSG00000039737.12	Prkrip1	chr5	protein_coding	Prkr interacting protein 1 (IL11 inducible)
chr5	136218473	136226704	-	136218473	136220754	A5SS&ES	0.33	50	50	ENSMUST00000151786.8	ENSMUSG00000039737.12	Prkrip1	chr5	protein_coding	Prkr interacting protein 1 (IL11 inducible)
chr5	136218473	136223151	-	136218473	136226704	A5SS	0.33	50	50	ENSMUST00000040980.12	ENSMUSG00000039737.12	Prkrip1	chr5	protein_coding	Prkr interacting protein 1 (IL11 inducible)
chr5	136223984	136226634	-	136224005	136226634	A3SS	0.33	50	50	ENSMUST00000123921.8	ENSMUSG00000039737.12	Prkrip1	chr5	protein_coding	Prkr interacting protein 1 (IL11 inducible)
chr5	136261240	136275328	-	136261240	136273487	5pMXE	0.33	50	50	ENSMUST00000196397.5	ENSMUSG00000005057.14	Sh2b2	chr5	protein_coding	SH2B adaptor protein 2
chr5	136261240	136273483	-	136261240	136273487	A5SS	0.33	50	50	ENSMUST00000196397.5	ENSMUSG00000005057.14	Sh2b2	chr5	protein_coding	SH2B adaptor protein 2
chr5	136261240	136275328	-	136261240	136273483	5pMXE	0.33	50	50	ENSMUST00000005188.14	ENSMUSG00000005057.14	Sh2b2	chr5	protein_coding	SH2B adaptor protein 2
chr5	136285179	136285654	-	136285198	136285654	A3SS	0.5	50	50	ENSMUST00000175998.8	ENSMUSG00000029705.18	Cux1	chr5	protein_coding	cut-like homeobox 1
chr5	136341862	136343161	-	136286894	136343161	A3SS	0.33	50	50	ENSMUST00000175998.8	ENSMUSG00000029705.18	Cux1	chr5	protein_coding	cut-like homeobox 1
chr5	136342168	136343161	-	136286894	136343161	A3SS	0.33	50	50	ENSMUST00000175998.8	ENSMUSG00000029705.18	Cux1	chr5	protein_coding	cut-like homeobox 1
chr5	136355786	136361478	-	136355864	136361478	A3SS	0.33	50	50	ENSMUST00000175998.8	ENSMUSG00000029705.18	Cux1	chr5	protein_coding	cut-like homeobox 1
chr5	136355792	136361478	-	136355864	136361478	A3SS	0.33	50	50	ENSMUST00000175998.8	ENSMUSG00000029705.18	Cux1	chr5	protein_coding	cut-like homeobox 1
chr5	136283037	136285082	-	136283037	136285086	A5SS	0.5	50	50	ENSMUST00000175998.8	ENSMUSG00000029705.18	Cux1	chr5	protein_coding	cut-like homeobox 1
chr5	136348693	136355598	-	136348693	136355604	A5SS	0.5	50	50	ENSMUST00000175998.8	ENSMUSG00000029705.18	Cux1	chr5	protein_coding	cut-like homeobox 1
chr5	136368991	136388828	-	136368991	136388856	A5SS	0.5	50	50	ENSMUST00000175998.8	ENSMUSG00000029705.18	Cux1	chr5	protein_coding	cut-like homeobox 1
chr5	136436881	136596032	-	136436881;136514705	136514595;136596032	ES	0.5	50	50	ENSMUST00000176216.9	ENSMUSG00000029705.18	Cux1	chr5	protein_coding	cut-like homeobox 1
chr5	136355786	136361478	-	136355792	136361478	A3SS	0.33	50	50	ENSMUST00000176216.9	ENSMUSG00000029705.18	Cux1	chr5	protein_coding	cut-like homeobox 1
chr5	136514705	136594234	-	136514705	136596032	A5SS	0.5	50	50	ENSMUST00000176216.9	ENSMUSG00000029705.18	Cux1	chr5	protein_coding	cut-like homeobox 1
chr5	136338702	136341497	-	136338702;136340414	136340349;136341497	ES	0.5	50	50	ENSMUST00000004097.16	ENSMUSG00000029705.18	Cux1	chr5	protein_coding	cut-like homeobox 1
chr5	136342168	136343161	-	136341862	136343161	A3SS	0.5	50	50	ENSMUST00000004097.16	ENSMUSG00000029705.18	Cux1	chr5	protein_coding	cut-like homeobox 1
chr5	136315917	136331222	-	136315917	136333577	A5SS	0.5	50	50	ENSMUST00000004097.16	ENSMUSG00000029705.18	Cux1	chr5	protein_coding	cut-like homeobox 1
chr5	136436881	136596032	-	136514705	136596032	3pMXE	0.5	50	50	ENSMUST00000177305.2	ENSMUSG00000029705.18	Cux1	chr5	protein_coding	cut-like homeobox 1
chr5	136724313	136726787	+	136724313;136725594	136725506;136726787	ES	0.5	50	50	ENSMUST00000196068.5	ENSMUSG00000005474.10	Myl10	chr5	protein_coding	myosin, light chain 10, regulatory
chr5	136729604	136729678	+	136729604	136729709	A3SS	0.5	50	50	ENSMUST00000196068.5	ENSMUSG00000005474.10	Myl10	chr5	protein_coding	myosin, light chain 10, regulatory
chr5	136722578	136723089	+	136722272	136723089	A5SS	0.5	50	50	ENSMUST00000196068.5	ENSMUSG00000005474.10	Myl10	chr5	protein_coding	myosin, light chain 10, regulatory
chr5	136865605	136876338	-	136865611	136876338	A3SS	0.5	50	50	ENSMUST00000057497.13	ENSMUSG00000004415.16	Col26a1	chr5	protein_coding	collagen, type XXVI, alpha 1
chr5	136794217	136801809	-	136794217	136865508	A5SS	0.5	50	50	ENSMUST00000057497.13	ENSMUSG00000004415.16	Col26a1	chr5	protein_coding	collagen, type XXVI, alpha 1
chr5	136876460	136911416	-	136876460	136911704	A5SS	0.5	50	50	ENSMUST00000057497.13	ENSMUSG00000004415.16	Col26a1	chr5	protein_coding	collagen, type XXVI, alpha 1
chr5	136940054	136940543	+	136940054;136940245	136940156;136940543	ES	0.5	50	50	ENSMUST00000200157.5	ENSMUSG00000007987.13	Ift22	chr5	protein_coding	intraflagellar transport 22
chr5	136940245	136940661	+	136940245	136940543	A3SS	0.5	50	50	ENSMUST00000200157.5	ENSMUSG00000007987.13	Ift22	chr5	protein_coding	intraflagellar transport 22
chr5	136940054	136940543	+	136940054	136940156	A3SS&ES	0.5	50	50	ENSMUST00000008131.10	ENSMUSG00000007987.13	Ift22	chr5	protein_coding	intraflagellar transport 22
chr5	136948285;136949624	136949285;136951161	+	136948285	136951161	cassetteExon	0.5	100	100	ENSMUST00000181045.8	ENSMUSG00000097908.8	4933404O12Rik	chr5	lncRNA	RIKEN cDNA 4933404O12 gene
chr5	136954749;136957134	136956924;136962593	+	136954749	136962593	cassetteExon	0.5	100	100	ENSMUST00000181045.8	ENSMUSG00000097908.8	4933404O12Rik	chr5	lncRNA	RIKEN cDNA 4933404O12 gene
chr5	136954749	136962316	+	136954749	136962593	A3SS	0.33	50	50	ENSMUST00000181045.8	ENSMUSG00000097908.8	4933404O12Rik	chr5	lncRNA	RIKEN cDNA 4933404O12 gene
chr5	136954749	136962316	+	136954749	136956924	A3SS&ES	0.33	50	50	ENSMUST00000199264.5	ENSMUSG00000097908.8	4933404O12Rik	chr5	lncRNA	RIKEN cDNA 4933404O12 gene
chr5	136982444	136993947	+	136982444;136991985	136991853;136993947	ES	0.33	50	50	ENSMUST00000111094.8	ENSMUSG00000019054.14	Fis1	chr5	protein_coding	fission, mitochondrial 1
chr5	136991985;136993249	136993063;136993947	+	136991985	136993947	cassetteExon	0.5	100	100	ENSMUST00000111094.8	ENSMUSG00000019054.14	Fis1	chr5	protein_coding	fission, mitochondrial 1
chr5	136991082	136991853	+	136982444	136991853	A5SS	0.25	50	50	ENSMUST00000111094.8	ENSMUSG00000019054.14	Fis1	chr5	protein_coding	fission, mitochondrial 1
chr5	136991465	136991853	+	136982444	136991853	A5SS	0.25	50	50	ENSMUST00000111094.8	ENSMUSG00000019054.14	Fis1	chr5	protein_coding	fission, mitochondrial 1
chr5	136991557	136991853	+	136982444	136991853	A5SS	0.25	50	50	ENSMUST00000111094.8	ENSMUSG00000019054.14	Fis1	chr5	protein_coding	fission, mitochondrial 1
chr5	136993249	136993947	+	136982444	136993947	A5SS	0.33	50	50	ENSMUST00000111097.8	ENSMUSG00000019054.14	Fis1	chr5	protein_coding	fission, mitochondrial 1
chr5	136991465	136991853	+	136991082	136991853	A5SS	0.25	50	50	ENSMUST00000019198.7	ENSMUSG00000019054.14	Fis1	chr5	protein_coding	fission, mitochondrial 1
chr5	136991557	136991853	+	136991082	136991853	A5SS	0.25	50	50	ENSMUST00000019198.7	ENSMUSG00000019054.14	Fis1	chr5	protein_coding	fission, mitochondrial 1
chr5	136991557	136991853	+	136991465	136991853	A5SS	0.25	50	50	ENSMUST00000138610.8	ENSMUSG00000019054.14	Fis1	chr5	protein_coding	fission, mitochondrial 1
chr5	136982444	136993947	+	136991985	136993947	5pMXE	0.33	50	50	ENSMUST00000152658.2	ENSMUSG00000019054.14	Fis1	chr5	protein_coding	fission, mitochondrial 1
chr5	137003029	137003295	+	137001338	137003295	A5SS	0.5	50	50	ENSMUST00000111093.8	ENSMUSG00000001739.15	Cldn15	chr5	protein_coding	claudin 15
chr5	137013903;137015109	137014980;137016343	-	137013903	137016343	cassetteExon	0.5	100	100	ENSMUST00000156963.8	ENSMUSG00000059518.15	Znhit1	chr5	protein_coding	zinc finger, HIT domain containing 1
chr5	137013903	137015665	-	137013903	137016343	A5SS	0.33	50	50	ENSMUST00000156963.8	ENSMUSG00000059518.15	Znhit1	chr5	protein_coding	zinc finger, HIT domain containing 1
chr5	137013903;137015109	137014980;137015665	-	137013903	137015665	cassetteExon	0.5	100	100	ENSMUST00000085941.12	ENSMUSG00000059518.15	Znhit1	chr5	protein_coding	zinc finger, HIT domain containing 1
chr5	137015109	137016343	-	137015109	137015665	5pMXE	0.5	50	50	ENSMUST00000111091.8	ENSMUSG00000059518.15	Znhit1	chr5	protein_coding	zinc finger, HIT domain containing 1
chr5	137013903	137015665	-	137013903	137014980	A5SS&ES	0.33	50	50	ENSMUST00000137272.2	ENSMUSG00000059518.15	Znhit1	chr5	protein_coding	zinc finger, HIT domain containing 1
chr5	137019938	137020185	+	137019938	137020154	A3SS	0.5	50	50	ENSMUST00000004968.11	ENSMUSG00000004846.11	Plod3	chr5	protein_coding	procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
chr5	137017555	137017737	+	137017589	137017737	A5SS	0.5	50	50	ENSMUST00000004968.11	ENSMUSG00000004846.11	Plod3	chr5	protein_coding	procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
chr5	137059315;137059693	137059578;137059820	+	137059315	137059820	cassetteExon	0.5	100	100	ENSMUST00000190827.7	ENSMUSG00000037428.15	Vgf	chr5	protein_coding	VGF nerve growth factor inducible
chr5	137059315	137059820	+	137059693	137059820	5pMXE	0.5	50	50	ENSMUST00000187382.2	ENSMUSG00000037428.15	Vgf	chr5	protein_coding	VGF nerve growth factor inducible
chr5	137072096	137073834	-	137072096	137074862	A5SS	0.33	50	50	ENSMUST00000111080.8	ENSMUSG00000004849.15	Ap1s1	chr5	protein_coding	adaptor protein complex AP-1, sigma 1
chr5	137072096	137074367	-	137072096	137074862	A5SS	0.33	50	50	ENSMUST00000111080.8	ENSMUSG00000004849.15	Ap1s1	chr5	protein_coding	adaptor protein complex AP-1, sigma 1
chr5	137072096	137073834	-	137072096	137074367	A5SS	0.33	50	50	ENSMUST00000150603.8	ENSMUSG00000004849.15	Ap1s1	chr5	protein_coding	adaptor protein complex AP-1, sigma 1
chr5	137143773	137144966	-	137143807	137144966	A3SS	0.5	50	50	ENSMUST00000054384.6	ENSMUSG00000043279.10	Trim56	chr5	protein_coding	tripartite motif-containing 56
chr5	137167197	137167886	-	137167197	137169539	A5SS	0.5	50	50	ENSMUST00000041226.11	ENSMUSG00000037390.14	Muc3	chr5	protein_coding	mucin 3, intestinal
chr5	137286290	137288271	+	137285896	137288271	A5SS	0.16	50	50	ENSMUST00000132191.8	ENSMUSG00000023328.15	Ache	chr5	protein_coding	acetylcholinesterase
chr5	137286319	137288271	+	137285896	137288271	A5SS	0.16	50	50	ENSMUST00000132191.8	ENSMUSG00000023328.15	Ache	chr5	protein_coding	acetylcholinesterase
chr5	137286629	137288271	+	137285896	137288271	A5SS	0.16	50	50	ENSMUST00000132191.8	ENSMUSG00000023328.15	Ache	chr5	protein_coding	acetylcholinesterase
chr5	137287563	137288271	+	137285896	137288271	A5SS	0.16	50	50	ENSMUST00000132191.8	ENSMUSG00000023328.15	Ache	chr5	protein_coding	acetylcholinesterase
chr5	137287616	137288271	+	137285896	137288271	A5SS	0.16	50	50	ENSMUST00000132191.8	ENSMUSG00000023328.15	Ache	chr5	protein_coding	acetylcholinesterase
chr5	137286319	137288271	+	137286290	137288271	A5SS	0.16	50	50	ENSMUST00000138591.8	ENSMUSG00000023328.15	Ache	chr5	protein_coding	acetylcholinesterase
chr5	137286629	137288271	+	137286290	137288271	A5SS	0.16	50	50	ENSMUST00000138591.8	ENSMUSG00000023328.15	Ache	chr5	protein_coding	acetylcholinesterase
chr5	137287563	137288271	+	137286290	137288271	A5SS	0.16	50	50	ENSMUST00000138591.8	ENSMUSG00000023328.15	Ache	chr5	protein_coding	acetylcholinesterase
chr5	137287616	137288271	+	137286290	137288271	A5SS	0.16	50	50	ENSMUST00000138591.8	ENSMUSG00000023328.15	Ache	chr5	protein_coding	acetylcholinesterase
chr5	137286629	137288271	+	137286319	137288271	A5SS	0.16	50	50	ENSMUST00000141123.8	ENSMUSG00000023328.15	Ache	chr5	protein_coding	acetylcholinesterase
chr5	137287563	137288271	+	137286319	137288271	A5SS	0.16	50	50	ENSMUST00000141123.8	ENSMUSG00000023328.15	Ache	chr5	protein_coding	acetylcholinesterase
chr5	137287616	137288271	+	137286319	137288271	A5SS	0.16	50	50	ENSMUST00000141123.8	ENSMUSG00000023328.15	Ache	chr5	protein_coding	acetylcholinesterase
chr5	137286629	137288271	+	137286629	137288274	A3SS	0.5	50	50	ENSMUST00000024099.11	ENSMUSG00000023328.15	Ache	chr5	protein_coding	acetylcholinesterase
chr5	137289363	137290005	+	137289363	137289741	A3SS	0.5	50	50	ENSMUST00000024099.11	ENSMUSG00000023328.15	Ache	chr5	protein_coding	acetylcholinesterase
chr5	137287563	137288271	+	137286629	137288271	A5SS	0.16	50	50	ENSMUST00000085934.4	ENSMUSG00000023328.15	Ache	chr5	protein_coding	acetylcholinesterase
chr5	137287616	137288271	+	137286629	137288271	A5SS	0.16	50	50	ENSMUST00000085934.4	ENSMUSG00000023328.15	Ache	chr5	protein_coding	acetylcholinesterase
chr5	137287616	137288271	+	137287563	137288271	A5SS	0.16	50	50	ENSMUST00000125195.8	ENSMUSG00000023328.15	Ache	chr5	protein_coding	acetylcholinesterase
chr5	137298675;137299909	137299580;137300388	-	137298675	137300388	cassetteExon	0.5	100	100	ENSMUST00000040873.12	ENSMUSG00000037364.13	Srrt	chr5	protein_coding	serrate RNA effector molecule homolog (Arabidopsis)
chr5	137300935;137301139	137301042;137305308	-	137300935;137301302	137301174;137305308	MXE	0.5	100	100	ENSMUST00000040873.12	ENSMUSG00000037364.13	Srrt	chr5	protein_coding	serrate RNA effector molecule homolog (Arabidopsis)
chr5	137294354	137294480	-	137294375	137294480	A3SS	0.5	50	50	ENSMUST00000040873.12	ENSMUSG00000037364.13	Srrt	chr5	protein_coding	serrate RNA effector molecule homolog (Arabidopsis)
chr5	137294569	137294729	-	137294581	137294729	A3SS	0.5	50	50	ENSMUST00000040873.12	ENSMUSG00000037364.13	Srrt	chr5	protein_coding	serrate RNA effector molecule homolog (Arabidopsis)
chr5	137297142	137297820	-	137297145	137297820	A3SS	0.5	50	50	ENSMUST00000040873.12	ENSMUSG00000037364.13	Srrt	chr5	protein_coding	serrate RNA effector molecule homolog (Arabidopsis)
chr5	137296568	137296932	-	137296568	137296653	A5SS&ES	0.5	50	50	ENSMUST00000040873.12	ENSMUSG00000037364.13	Srrt	chr5	protein_coding	serrate RNA effector molecule homolog (Arabidopsis)
chr5	137297934	137298011	-	137297934	137298016	A5SS	0.5	50	50	ENSMUST00000040873.12	ENSMUSG00000037364.13	Srrt	chr5	protein_coding	serrate RNA effector molecule homolog (Arabidopsis)
chr5	137297142	137298011	-	137297934	137298011	A3SS&ES	0.5	50	50	ENSMUST00000198526.5	ENSMUSG00000037364.13	Srrt	chr5	protein_coding	serrate RNA effector molecule homolog (Arabidopsis)
chr5	137297142;137297934	137297820;137298011	-	137297142	137298011	cassetteExon	0.5	100	100	ENSMUST00000199365.5	ENSMUSG00000037364.13	Srrt	chr5	protein_coding	serrate RNA effector molecule homolog (Arabidopsis)
chr5	137298675	137300388	-	137298675	137299580	A5SS	0.5	50	50	ENSMUST00000199473.2	ENSMUSG00000037364.13	Srrt	chr5	protein_coding	serrate RNA effector molecule homolog (Arabidopsis)
chr5	137311738	137312222	-	137311738;137311970	137311843;137312222	ES	0.33	50	50	ENSMUST00000024119.11	ENSMUSG00000023348.12	Trip6	chr5	protein_coding	thyroid hormone receptor interactor 6
chr5	137311351;137311738	137311613;137312222	-	137311351	137312222	cassetteExon	0.5	100	100	ENSMUST00000199121.2	ENSMUSG00000023348.12	Trip6	chr5	protein_coding	thyroid hormone receptor interactor 6
chr5	137311351;137311970	137311613;137312222	-	137311351	137312222	cassetteExon	0.5	100	100	ENSMUST00000199121.2	ENSMUSG00000023348.12	Trip6	chr5	protein_coding	thyroid hormone receptor interactor 6
chr5	137311351	137312222	-	137311970	137312222	A3SS&ES	0.33	50	50	ENSMUST00000197816.2	ENSMUSG00000023348.12	Trip6	chr5	protein_coding	thyroid hormone receptor interactor 6
chr5	137311351	137312222	-	137311738	137312222	3pMXE	0.33	50	50	ENSMUST00000199564.2	ENSMUSG00000023348.12	Trip6	chr5	protein_coding	thyroid hormone receptor interactor 6
chr5	137330940	137331131	-	137330940	137331710	A5SS	0.5	50	50	ENSMUST00000039991.14	ENSMUSG00000037344.15	Slc12a9	chr5	protein_coding	solute carrier family 12 (potassium/chloride transporters), member 9
chr5	137370479	137371774	+	137370479;137370802	137370647;137371774	ES	0.5	50	50	ENSMUST00000061244.15	ENSMUSG00000029710.16	Ephb4	chr5	protein_coding	Eph receptor B4
chr5	137359728	137360625	+	137359728	137360652	A3SS	0.5	50	50	ENSMUST00000061244.15	ENSMUSG00000029710.16	Ephb4	chr5	protein_coding	Eph receptor B4
chr5	137443735	137444879	-	137443735;137444561	137444381;137444879	ES	0.5	50	50	ENSMUST00000164178.2	ENSMUSG00000079173.12	Zan	chr5	protein_coding	zonadhesin
chr5	137408596	137409609	-	137408596	137409650	A5SS	0.5	50	50	ENSMUST00000164178.2	ENSMUSG00000079173.12	Zan	chr5	protein_coding	zonadhesin
chr5	137481499	137482243	-	137481502	137482243	A3SS	0.5	50	50	ENSMUST00000031723.14	ENSMUSG00000029711.14	Epo	chr5	protein_coding	erythropoietin
chr5	137528027	137531401	-	137484114	137531401	A3SS	0.14	50	50	ENSMUST00000111038.8	ENSMUSG00000029711.14	Epo	chr5	protein_coding	erythropoietin
chr5	137528171	137531401	-	137484114	137531401	A3SS	0.14	50	50	ENSMUST00000111038.8	ENSMUSG00000029711.14	Epo	chr5	protein_coding	erythropoietin
chr5	137528552	137531401	-	137484114	137531401	A3SS	0.14	50	50	ENSMUST00000111038.8	ENSMUSG00000029711.14	Epo	chr5	protein_coding	erythropoietin
chr5	137528685	137531401	-	137484114	137531401	A3SS	0.14	50	50	ENSMUST00000111038.8	ENSMUSG00000029711.14	Epo	chr5	protein_coding	erythropoietin
chr5	137528698	137531401	-	137484114	137531401	A3SS	0.14	50	50	ENSMUST00000111038.8	ENSMUSG00000029711.14	Epo	chr5	protein_coding	erythropoietin
chr5	137529102	137531401	-	137484114	137531401	A3SS	0.14	50	50	ENSMUST00000111038.8	ENSMUSG00000029711.14	Epo	chr5	protein_coding	erythropoietin
chr5	137528698	137531401	-	137528698;137529102	137528957;137531401	ES	0.16	50	50	ENSMUST00000031726.15	ENSMUSG00000029713.16	Gnb2	chr5	protein_coding	guanine nucleotide binding protein (G protein), beta 2
chr5	137528685	137531401	-	137529102	137531401	A3SS&ES	0.16	50	50	ENSMUST00000031726.15	ENSMUSG00000029713.16	Gnb2	chr5	protein_coding	guanine nucleotide binding protein (G protein), beta 2
chr5	137529102	137529237	-	137529102	137531401	A5SS	0.25	50	50	ENSMUST00000031726.15	ENSMUSG00000029713.16	Gnb2	chr5	protein_coding	guanine nucleotide binding protein (G protein), beta 2
chr5	137529102	137529792	-	137529102	137531401	A5SS	0.25	50	50	ENSMUST00000031726.15	ENSMUSG00000029713.16	Gnb2	chr5	protein_coding	guanine nucleotide binding protein (G protein), beta 2
chr5	137529102	137529869	-	137529102	137531401	A5SS	0.25	50	50	ENSMUST00000031726.15	ENSMUSG00000029713.16	Gnb2	chr5	protein_coding	guanine nucleotide binding protein (G protein), beta 2
chr5	137528027	137531401	-	137528027;137528171	137528108;137531401	ES	0.16	50	50	ENSMUST00000143495.8	ENSMUSG00000029713.16	Gnb2	chr5	protein_coding	guanine nucleotide binding protein (G protein), beta 2
chr5	137528171;137528552	137528446;137531401	-	137528171	137531401	cassetteExon	0.5	100	100	ENSMUST00000143495.8	ENSMUSG00000029713.16	Gnb2	chr5	protein_coding	guanine nucleotide binding protein (G protein), beta 2
chr5	137528171;137528685	137528446;137531401	-	137528171	137531401	cassetteExon	0.5	100	100	ENSMUST00000143495.8	ENSMUSG00000029713.16	Gnb2	chr5	protein_coding	guanine nucleotide binding protein (G protein), beta 2
chr5	137528171;137528698	137528446;137531401	-	137528171	137531401	cassetteExon	0.5	100	100	ENSMUST00000143495.8	ENSMUSG00000029713.16	Gnb2	chr5	protein_coding	guanine nucleotide binding protein (G protein), beta 2
chr5	137529102	137531401	-	137528171	137531401	A3SS	0.16	50	50	ENSMUST00000143495.8	ENSMUSG00000029713.16	Gnb2	chr5	protein_coding	guanine nucleotide binding protein (G protein), beta 2
chr5	137528552	137531401	-	137528552;137528685	137528660;137531401	ES	0.16	50	50	ENSMUST00000111023.8	ENSMUSG00000029713.16	Gnb2	chr5	protein_coding	guanine nucleotide binding protein (G protein), beta 2
chr5	137528698	137531401	-	137528685	137531401	A3SS	0.16	50	50	ENSMUST00000111023.8	ENSMUSG00000029713.16	Gnb2	chr5	protein_coding	guanine nucleotide binding protein (G protein), beta 2
chr5	137529102	137529237	-	137529102	137529869	A5SS	0.25	50	50	ENSMUST00000111027.8	ENSMUSG00000029713.16	Gnb2	chr5	protein_coding	guanine nucleotide binding protein (G protein), beta 2
chr5	137529102	137529792	-	137529102	137529869	A5SS	0.25	50	50	ENSMUST00000111027.8	ENSMUSG00000029713.16	Gnb2	chr5	protein_coding	guanine nucleotide binding protein (G protein), beta 2
chr5	137528552	137531401	-	137528552;137528698	137528660;137531401	ES	0.16	50	50	ENSMUST00000111020.8	ENSMUSG00000029713.16	Gnb2	chr5	protein_coding	guanine nucleotide binding protein (G protein), beta 2
chr5	137528698	137531401	-	137528698	137528957	5pMXE	0.5	50	50	ENSMUST00000150063.9	ENSMUSG00000029713.16	Gnb2	chr5	protein_coding	guanine nucleotide binding protein (G protein), beta 2
chr5	137528027;137528552	137528108;137531401	-	137528027	137531401	cassetteExon	0.5	100	100	ENSMUST00000168746.8	ENSMUSG00000029713.16	Gnb2	chr5	protein_coding	guanine nucleotide binding protein (G protein), beta 2
chr5	137528685	137531401	-	137528027	137531401	A3SS	0.16	50	50	ENSMUST00000168746.8	ENSMUSG00000029713.16	Gnb2	chr5	protein_coding	guanine nucleotide binding protein (G protein), beta 2
chr5	137528698	137531401	-	137528027	137531401	A3SS	0.16	50	50	ENSMUST00000168746.8	ENSMUSG00000029713.16	Gnb2	chr5	protein_coding	guanine nucleotide binding protein (G protein), beta 2
chr5	137529102	137531401	-	137528027	137531401	A3SS	0.16	50	50	ENSMUST00000168746.8	ENSMUSG00000029713.16	Gnb2	chr5	protein_coding	guanine nucleotide binding protein (G protein), beta 2
chr5	137528552;137529102	137528660;137531401	-	137528552	137531401	cassetteExon	0.5	100	100	ENSMUST00000170293.8	ENSMUSG00000029713.16	Gnb2	chr5	protein_coding	guanine nucleotide binding protein (G protein), beta 2
chr5	137528027	137531401	-	137528027	137528108	5pMXE	0.5	50	50	ENSMUST00000125868.2	ENSMUSG00000029713.16	Gnb2	chr5	protein_coding	guanine nucleotide binding protein (G protein), beta 2
chr5	137529102	137529792	-	137529102	137529237	5pMXE	0.25	50	50	ENSMUST00000132525.8	ENSMUSG00000029713.16	Gnb2	chr5	protein_coding	guanine nucleotide binding protein (G protein), beta 2
chr5	137551921;137552402	137552326;137552775	+	137551921	137552775	cassetteExon	0.5	100	100	ENSMUST00000136088.8	ENSMUSG00000029712.15	Actl6b	chr5	protein_coding	actin-like 6B
chr5	137552045	137552775	+	137551921	137552775	A5SS	0.33	50	50	ENSMUST00000136088.8	ENSMUSG00000029712.15	Actl6b	chr5	protein_coding	actin-like 6B
chr5	137552045	137561369	+	137553358	137561369	A5SS&ES	0.33	50	50	ENSMUST00000136088.8	ENSMUSG00000029712.15	Actl6b	chr5	protein_coding	actin-like 6B
chr5	137565330	137565500	+	137565330	137565519	A3SS	0.5	50	50	ENSMUST00000139395.8	ENSMUSG00000029712.15	Actl6b	chr5	protein_coding	actin-like 6B
chr5	137552045	137552326	+	137551921	137552326	A5SS	0.5	50	50	ENSMUST00000139395.8	ENSMUSG00000029712.15	Actl6b	chr5	protein_coding	actin-like 6B
chr5	137552045	137552775	+	137552402	137552775	A5SS&ES	0.33	50	50	ENSMUST00000139395.8	ENSMUSG00000029712.15	Actl6b	chr5	protein_coding	actin-like 6B
chr5	137551921	137552775	+	137551921	137552326	3pMXE	0.33	50	50	ENSMUST00000145500.2	ENSMUSG00000029712.15	Actl6b	chr5	protein_coding	actin-like 6B
chr5	137551921	137561369	+	137551921	137552326	3pMXE	0.33	50	50	ENSMUST00000145500.2	ENSMUSG00000029712.15	Actl6b	chr5	protein_coding	actin-like 6B
chr5	137551921	137552775	+	137551921	137561369	A3SS	0.33	50	50	ENSMUST00000198601.2	ENSMUSG00000029712.15	Actl6b	chr5	protein_coding	actin-like 6B
chr5	137552045	137561369	+	137551921	137561369	A5SS	0.33	50	50	ENSMUST00000198601.2	ENSMUSG00000029712.15	Actl6b	chr5	protein_coding	actin-like 6B
chr5	137553358	137561369	+	137551921	137561369	A5SS	0.33	50	50	ENSMUST00000198601.2	ENSMUSG00000029712.15	Actl6b	chr5	protein_coding	actin-like 6B
chr5	137552045	137552326	+	137552045	137561369	A3SS	0.33	50	50	ENSMUST00000136565.8	ENSMUSG00000029712.15	Actl6b	chr5	protein_coding	actin-like 6B
chr5	137552045	137552775	+	137552045	137561369	A3SS	0.33	50	50	ENSMUST00000136565.8	ENSMUSG00000029712.15	Actl6b	chr5	protein_coding	actin-like 6B
chr5	137552045	137552775	+	137552045;137552402	137552326;137552775	ES	0.33	50	50	ENSMUST00000149292.8	ENSMUSG00000029712.15	Actl6b	chr5	protein_coding	actin-like 6B
chr5	137551921	137552775	+	137552402	137552775	A5SS&ES	0.33	50	50	ENSMUST00000149292.8	ENSMUSG00000029712.15	Actl6b	chr5	protein_coding	actin-like 6B
chr5	137578548	137578911	+	137578548	137580851	A3SS	0.5	50	50	ENSMUST00000198866.5	ENSMUSG00000029716.14	Tfr2	chr5	protein_coding	transferrin receptor 2
chr5	137569041	137569250	+	137568380	137569250	A5SS	0.5	50	50	ENSMUST00000198866.5	ENSMUSG00000029716.14	Tfr2	chr5	protein_coding	transferrin receptor 2
chr5	137568215	137568334	+	137568196	137568334	A5SS	0.33	50	50	ENSMUST00000031729.13	ENSMUSG00000029716.14	Tfr2	chr5	protein_coding	transferrin receptor 2
chr5	137568256	137568334	+	137568196	137568334	A5SS	0.33	50	50	ENSMUST00000031729.13	ENSMUSG00000029716.14	Tfr2	chr5	protein_coding	transferrin receptor 2
chr5	137568256	137568334	+	137568215	137568334	A5SS	0.33	50	50	ENSMUST00000200190.5	ENSMUSG00000029716.14	Tfr2	chr5	protein_coding	transferrin receptor 2
chr5	137598613	137599004	-	137598805	137599004	A3SS	0.5	50	50	ENSMUST00000037620.14	ENSMUSG00000037221.14	Mospd3	chr5	protein_coding	motile sperm domain containing 3
chr5	137598805	137598930	-	137598805	137599004	A5SS	0.33	50	50	ENSMUST00000037620.14	ENSMUSG00000037221.14	Mospd3	chr5	protein_coding	motile sperm domain containing 3
chr5	137598805	137599253	-	137598805	137599004	A5SS	0.33	50	50	ENSMUST00000037620.14	ENSMUSG00000037221.14	Mospd3	chr5	protein_coding	motile sperm domain containing 3
chr5	137598805	137598930	-	137598805	137599253	A5SS	0.33	50	50	ENSMUST00000154708.8	ENSMUSG00000037221.14	Mospd3	chr5	protein_coding	motile sperm domain containing 3
chr5	137607411	137609499	-	137607411;137608767	137608659;137609499	ES	0.5	50	50	ENSMUST00000128755.8	ENSMUSG00000029718.15	Pcolce	chr5	protein_coding	procollagen C-endopeptidase enhancer protein
chr5	137608767	137611935	-	137608767	137609499	5pMXE	0.5	50	50	ENSMUST00000128755.8	ENSMUSG00000029718.15	Pcolce	chr5	protein_coding	procollagen C-endopeptidase enhancer protein
chr5	137606341;137606953	137606879;137607153	-	137606341	137607153	cassetteExon	0.5	100	100	ENSMUST00000128755.8	ENSMUSG00000029718.15	Pcolce	chr5	protein_coding	procollagen C-endopeptidase enhancer protein
chr5	137604062	137607153	-	137606341	137607153	A3SS&ES	0.33	50	50	ENSMUST00000128755.8	ENSMUSG00000029718.15	Pcolce	chr5	protein_coding	procollagen C-endopeptidase enhancer protein
chr5	137607580	137608659	-	137607411	137608659	A3SS	0.5	50	50	ENSMUST00000128755.8	ENSMUSG00000029718.15	Pcolce	chr5	protein_coding	procollagen C-endopeptidase enhancer protein
chr5	137607411	137609499	-	137607411	137608659	5pMXE	0.33	50	50	ENSMUST00000197912.5	ENSMUSG00000029718.15	Pcolce	chr5	protein_coding	procollagen C-endopeptidase enhancer protein
chr5	137607411	137611935	-	137607411	137608659	5pMXE	0.33	50	50	ENSMUST00000197912.5	ENSMUSG00000029718.15	Pcolce	chr5	protein_coding	procollagen C-endopeptidase enhancer protein
chr5	137606953	137607153	-	137604062	137607153	A3SS	0.33	50	50	ENSMUST00000197912.5	ENSMUSG00000029718.15	Pcolce	chr5	protein_coding	procollagen C-endopeptidase enhancer protein
chr5	137604062	137605089	-	137604062	137607153	A5SS	0.5	50	50	ENSMUST00000197912.5	ENSMUSG00000029718.15	Pcolce	chr5	protein_coding	procollagen C-endopeptidase enhancer protein
chr5	137607411	137611935	-	137607411	137609499	5pMXE	0.33	50	50	ENSMUST00000136649.8	ENSMUSG00000029718.15	Pcolce	chr5	protein_coding	procollagen C-endopeptidase enhancer protein
chr5	137607411;137608767	137608659;137611935	-	137607411	137611935	cassetteExon	0.5	100	100	ENSMUST00000155251.8	ENSMUSG00000029718.15	Pcolce	chr5	protein_coding	procollagen C-endopeptidase enhancer protein
chr5	137611381	137611935	-	137607411	137611935	A3SS	0.33	50	50	ENSMUST00000155251.8	ENSMUSG00000029718.15	Pcolce	chr5	protein_coding	procollagen C-endopeptidase enhancer protein
chr5	137611381	137611935	-	137608767	137611935	A3SS	0.33	50	50	ENSMUST00000124693.8	ENSMUSG00000029718.15	Pcolce	chr5	protein_coding	procollagen C-endopeptidase enhancer protein
chr5	137607411	137609499	-	137608767	137609499	A3SS&ES	0.5	50	50	ENSMUST00000137210.2	ENSMUSG00000029718.15	Pcolce	chr5	protein_coding	procollagen C-endopeptidase enhancer protein
chr5	137611381	137616646	-	137611381;137612105	137611935;137616646	ES	0.5	50	50	ENSMUST00000031732.14	ENSMUSG00000089984.8	Fbxo24	chr5	protein_coding	F-box protein 24
chr5	137622850	137626914	-	137622850	137623201	5pMXE	0.5	50	50	ENSMUST00000031732.14	ENSMUSG00000089984.8	Fbxo24	chr5	protein_coding	F-box protein 24
chr5	137617103	137617847	-	137617169	137617847	A3SS	0.5	50	50	ENSMUST00000031732.14	ENSMUSG00000089984.8	Fbxo24	chr5	protein_coding	F-box protein 24
chr5	137618005	137619625	-	137618005	137619468	A5SS	0.5	50	50	ENSMUST00000031732.14	ENSMUSG00000089984.8	Fbxo24	chr5	protein_coding	F-box protein 24
chr5	137620274;137622850	137622482;137626914	-	137620274	137626914	cassetteExon	0.5	100	100	ENSMUST00000136028.2	ENSMUSG00000089984.8	Fbxo24	chr5	protein_coding	F-box protein 24
chr5	137627688	137632111	+	137627688;137631978	137631834;137632111	ES	0.5	50	50	ENSMUST00000031734.16	ENSMUSG00000093445.8	Lrch4	chr5	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 4
chr5	137636804	137637384	+	137636804;137637000	137636917;137637384	ES	0.5	50	50	ENSMUST00000031734.16	ENSMUSG00000093445.8	Lrch4	chr5	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 4
chr5	137627688;137629252	137629049;137631834	+	137627688	137631834	cassetteExon	0.5	100	100	ENSMUST00000031734.16	ENSMUSG00000093445.8	Lrch4	chr5	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 4
chr5	137637917	137639027	+	137637917	137638210	A3SS	0.5	50	50	ENSMUST00000031734.16	ENSMUSG00000093445.8	Lrch4	chr5	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 4
chr5	137628569	137631834	+	137627688	137631834	A5SS	0.33	50	50	ENSMUST00000031734.16	ENSMUSG00000093445.8	Lrch4	chr5	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 4
chr5	137627688	137629049	+	137627688	137632111	A3SS	0.33	50	50	ENSMUST00000177477.2	ENSMUSG00000093445.8	Lrch4	chr5	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 4
chr5	137628569	137631834	+	137629252	137631834	A5SS&ES	0.33	50	50	ENSMUST00000176011.8	ENSMUSG00000093445.8	Lrch4	chr5	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 4
chr5	137653990	137661698	-	137653990;137659754	137659626;137661698	ES	0.33	50	50	ENSMUST00000031736.16	ENSMUSG00000029722.16	Agfg2	chr5	protein_coding	ArfGAP with FG repeats 2
chr5	137653990;137658456	137658424;137659626	-	137653990	137659626	cassetteExon	0.5	100	100	ENSMUST00000031736.16	ENSMUSG00000029722.16	Agfg2	chr5	protein_coding	ArfGAP with FG repeats 2
chr5	137659751	137661698	-	137659754	137661698	A3SS	0.33	50	50	ENSMUST00000031736.16	ENSMUSG00000029722.16	Agfg2	chr5	protein_coding	ArfGAP with FG repeats 2
chr5	137653990	137661698	-	137653990	137659626	5pMXE	0.33	50	50	ENSMUST00000147518.2	ENSMUSG00000029722.16	Agfg2	chr5	protein_coding	ArfGAP with FG repeats 2
chr5	137653990;137659751	137659626;137661698	-	137653990	137661698	cassetteExon	0.5	100	100	ENSMUST00000198657.2	ENSMUSG00000029722.16	Agfg2	chr5	protein_coding	ArfGAP with FG repeats 2
chr5	137653990	137658424	-	137653990	137661698	A5SS	0.33	50	50	ENSMUST00000198657.2	ENSMUSG00000029722.16	Agfg2	chr5	protein_coding	ArfGAP with FG repeats 2
chr5	137732184	137733102	-	137732187	137733102	A3SS	0.5	50	50	ENSMUST00000118326.8	ENSMUSG00000045348.17	Nyap1	chr5	protein_coding	neuronal tyrosine-phosphorylated phosphoinositide 3-kinase adaptor 1
chr5	137756994	137757329	+	137756994	137760638	A3SS	0.5	50	50	ENSMUST00000100540.10	ENSMUSG00000029723.17	Tsc22d4	chr5	protein_coding	TSC22 domain family, member 4
chr5	137756438	137756946	+	137749630	137756946	A5SS	0.33	50	50	ENSMUST00000100540.10	ENSMUSG00000029723.17	Tsc22d4	chr5	protein_coding	TSC22 domain family, member 4
chr5	137756821	137756946	+	137749630	137756946	A5SS	0.33	50	50	ENSMUST00000100540.10	ENSMUSG00000029723.17	Tsc22d4	chr5	protein_coding	TSC22 domain family, member 4
chr5	137760249	137760638	+	137756994	137760638	A5SS	0.5	50	50	ENSMUST00000100540.10	ENSMUSG00000029723.17	Tsc22d4	chr5	protein_coding	TSC22 domain family, member 4
chr5	137760959	137766223	+	137760970	137766223	A5SS	0.33	50	50	ENSMUST00000100540.10	ENSMUSG00000029723.17	Tsc22d4	chr5	protein_coding	TSC22 domain family, member 4
chr5	137766140	137766223	+	137760970	137766223	A5SS	0.33	50	50	ENSMUST00000100540.10	ENSMUSG00000029723.17	Tsc22d4	chr5	protein_coding	TSC22 domain family, member 4
chr5	137756821	137756946	+	137756438	137756946	A5SS	0.33	50	50	ENSMUST00000141733.8	ENSMUSG00000029723.17	Tsc22d4	chr5	protein_coding	TSC22 domain family, member 4
chr5	137766140	137766223	+	137760959	137766223	A5SS	0.33	50	50	ENSMUST00000110983.3	ENSMUSG00000029723.17	Tsc22d4	chr5	protein_coding	TSC22 domain family, member 4
chr5	137777807	137778116	+	137777807	137777888	3pMXE	0.5	50	50	ENSMUST00000126126.8	ENSMUSG00000029725.11	Ppp1r35	chr5	protein_coding	protein phosphatase 1, regulatory subunit 35
chr5	137777483	137777564	+	137777159	137777564	A5SS	0.5	50	50	ENSMUST00000126126.8	ENSMUSG00000029725.11	Ppp1r35	chr5	protein_coding	protein phosphatase 1, regulatory subunit 35
chr5	137777807	137778116	+	137777807;137778024	137777888;137778116	ES	0.5	50	50	ENSMUST00000031739.6	ENSMUSG00000029725.11	Ppp1r35	chr5	protein_coding	protein phosphatase 1, regulatory subunit 35
chr5	137777807	137778116	+	137778024	137778116	A5SS	0.5	50	50	ENSMUST00000152298.2	ENSMUSG00000029725.11	Ppp1r35	chr5	protein_coding	protein phosphatase 1, regulatory subunit 35
chr5	137781610	137785657	-	137781610	137782723	5pMXE	0.33	50	50	ENSMUST00000031740.16	ENSMUSG00000029726.17	Mepce	chr5	protein_coding	methylphosphate capping enzyme
chr5	137781610	137784856	-	137781610	137782723	A5SS	0.33	50	50	ENSMUST00000031740.16	ENSMUSG00000029726.17	Mepce	chr5	protein_coding	methylphosphate capping enzyme
chr5	137781610	137785657	-	137781610	137784856	5pMXE	0.33	50	50	ENSMUST00000132726.2	ENSMUSG00000029726.17	Mepce	chr5	protein_coding	methylphosphate capping enzyme
chr5	137797863	137799236	+	137797863;137798405	137798248;137799236	ES	0.5	50	50	ENSMUST00000035852.14	ENSMUSG00000037108.14	Zcwpw1	chr5	protein_coding	zinc finger, CW type with PWWP domain 1
chr5	137810362	137815720	+	137810362;137815238	137815155;137815720	ES	0.5	50	50	ENSMUST00000035852.14	ENSMUSG00000037108.14	Zcwpw1	chr5	protein_coding	zinc finger, CW type with PWWP domain 1
chr5	137833970	137834297	-	137833979	137834297	A3SS	0.33	50	50	ENSMUST00000058897.11	ENSMUSG00000046245.14	Pilra	chr5	protein_coding	paired immunoglobin-like type 2 receptor alpha
chr5	137834008	137834297	-	137833979	137834297	A3SS	0.33	50	50	ENSMUST00000058897.11	ENSMUSG00000046245.14	Pilra	chr5	protein_coding	paired immunoglobin-like type 2 receptor alpha
chr5	137834008	137834297	-	137833970	137834297	A3SS	0.33	50	50	ENSMUST00000197586.2	ENSMUSG00000046245.14	Pilra	chr5	protein_coding	paired immunoglobin-like type 2 receptor alpha
chr5	137850630	137855418	-	137850630	137851287	5pMXE	0.5	50	50	ENSMUST00000197403.5	ENSMUSG00000066684.11	Pilrb1	chr5	protein_coding	paired immunoglobin-like type 2 receptor beta 1
chr5	137851317	137853140	-	137851450	137853140	A3SS	0.5	50	50	ENSMUST00000197914.5	ENSMUSG00000066684.11	Pilrb1	chr5	protein_coding	paired immunoglobin-like type 2 receptor beta 1
chr5	137853329	137855418	-	137850630	137855418	A3SS	0.5	50	50	ENSMUST00000198703.2	ENSMUSG00000066684.11	Pilrb1	chr5	protein_coding	paired immunoglobin-like type 2 receptor beta 1
chr5	137855833	137856122	-	137855804	137856122	A3SS	0.5	50	50	ENSMUST00000110978.7	ENSMUSG00000066684.11	Pilrb1	chr5	protein_coding	paired immunoglobin-like type 2 receptor beta 1
chr5	137864310	137869127	-	137864310	137864967	5pMXE	0.5	50	50	ENSMUST00000197411.5	ENSMUSG00000066682.12	Pilrb2	chr5	protein_coding	paired immunoglobin-like type 2 receptor beta 2
chr5	137864997	137866840	-	137865130	137866840	A3SS	0.5	50	50	ENSMUST00000198024.5	ENSMUSG00000066682.12	Pilrb2	chr5	protein_coding	paired immunoglobin-like type 2 receptor beta 2
chr5	137867029	137869127	-	137864310	137869127	A3SS	0.5	50	50	ENSMUST00000199247.2	ENSMUSG00000066682.12	Pilrb2	chr5	protein_coding	paired immunoglobin-like type 2 receptor beta 2
chr5	137869542	137869831	-	137869513	137869831	A3SS	0.5	50	50	ENSMUST00000196162.5	ENSMUSG00000066682.12	Pilrb2	chr5	protein_coding	paired immunoglobin-like type 2 receptor beta 2
chr5	137979882	137983388	+	137979882	137983500	A3SS	0.5	50	50	ENSMUST00000197571.2	ENSMUSG00000037053.7	Azgp1	chr5	protein_coding	alpha-2-glycoprotein 1, zinc
chr5	138019949	138046583	+	138019949	138030612	3pMXE	0.5	50	50	ENSMUST00000085886.3	ENSMUSG00000075599.5	Smok3a	chr5	protein_coding	sperm motility kinase 3A
chr5	138035918	138046583	+	138019949	138046583	A5SS	0.5	50	50	ENSMUST00000166206.9	ENSMUSG00000079156.12	Smok3b	chr5	protein_coding	sperm motility kinase 3B
chr5	138083493	138091188	+	138083493	138091182	A3SS	0.5	50	50	ENSMUST00000019660.11	ENSMUSG00000029729.13	Zkscan1	chr5	protein_coding	zinc finger with KRAB and SCAN domains 1
chr5	138092401	138095329	+	138092401	138098852	A3SS	0.5	50	50	ENSMUST00000066617.12	ENSMUSG00000029729.13	Zkscan1	chr5	protein_coding	zinc finger with KRAB and SCAN domains 1
chr5	138095841	138098852	+	138092401	138098852	A5SS	0.5	50	50	ENSMUST00000066617.12	ENSMUSG00000029729.13	Zkscan1	chr5	protein_coding	zinc finger with KRAB and SCAN domains 1
chr5	138115250	138123240	+	138115250;138116182	138116098;138123240	ES	0.25	50	50	ENSMUST00000062350.15	ENSMUSG00000037017.16	Zscan21	chr5	protein_coding	zinc finger and SCAN domain containing 21
chr5	138116182	138124716	+	138116182;138123952	138123240;138124716	ES	0.5	50	50	ENSMUST00000062350.15	ENSMUSG00000037017.16	Zscan21	chr5	protein_coding	zinc finger and SCAN domain containing 21
chr5	138116182;138117991	138117912;138123240	+	138116182	138123240	cassetteExon	0.5	100	100	ENSMUST00000062350.15	ENSMUSG00000037017.16	Zscan21	chr5	protein_coding	zinc finger and SCAN domain containing 21
chr5	138115269	138116098	+	138115250	138116098	A5SS	0.5	50	50	ENSMUST00000062350.15	ENSMUSG00000037017.16	Zscan21	chr5	protein_coding	zinc finger and SCAN domain containing 21
chr5	138115269	138123240	+	138116182	138123240	A5SS&ES	0.25	50	50	ENSMUST00000062350.15	ENSMUSG00000037017.16	Zscan21	chr5	protein_coding	zinc finger and SCAN domain containing 21
chr5	138115269	138123240	+	138115269;138116182	138116098;138123240	ES	0.25	50	50	ENSMUST00000110961.9	ENSMUSG00000037017.16	Zscan21	chr5	protein_coding	zinc finger and SCAN domain containing 21
chr5	138115250	138123240	+	138116182	138123240	A5SS&ES	0.25	50	50	ENSMUST00000110961.9	ENSMUSG00000037017.16	Zscan21	chr5	protein_coding	zinc finger and SCAN domain containing 21
chr5	138115250;138116182	138116098;138124716	+	138115250;138123952	138123240;138124716	MXE	0.5	100	100	ENSMUST00000080732.10	ENSMUSG00000037017.16	Zscan21	chr5	protein_coding	zinc finger and SCAN domain containing 21
chr5	138115269	138123240	+	138115250	138123240	A5SS	0.25	50	50	ENSMUST00000080732.10	ENSMUSG00000037017.16	Zscan21	chr5	protein_coding	zinc finger and SCAN domain containing 21
chr5	138117991	138123240	+	138115250	138123240	A5SS	0.25	50	50	ENSMUST00000080732.10	ENSMUSG00000037017.16	Zscan21	chr5	protein_coding	zinc finger and SCAN domain containing 21
chr5	138115269;138116182	138116098;138124716	+	138115269;138123952	138123240;138124716	MXE	0.5	100	100	ENSMUST00000110960.9	ENSMUSG00000037017.16	Zscan21	chr5	protein_coding	zinc finger and SCAN domain containing 21
chr5	138117991	138123240	+	138115269	138123240	A5SS	0.25	50	50	ENSMUST00000110960.9	ENSMUSG00000037017.16	Zscan21	chr5	protein_coding	zinc finger and SCAN domain containing 21
chr5	138115250	138123240	+	138115250	138116098	A3SS&ES	0.5	50	50	ENSMUST00000142185.8	ENSMUSG00000037017.16	Zscan21	chr5	protein_coding	zinc finger and SCAN domain containing 21
chr5	138116182	138117912	+	138116182	138124716	A3SS	0.33	50	50	ENSMUST00000142185.8	ENSMUSG00000037017.16	Zscan21	chr5	protein_coding	zinc finger and SCAN domain containing 21
chr5	138116182	138123240	+	138116182	138124716	A3SS	0.33	50	50	ENSMUST00000142185.8	ENSMUSG00000037017.16	Zscan21	chr5	protein_coding	zinc finger and SCAN domain containing 21
chr5	138123952	138124716	+	138116182	138124716	A5SS	0.5	50	50	ENSMUST00000142185.8	ENSMUSG00000037017.16	Zscan21	chr5	protein_coding	zinc finger and SCAN domain containing 21
chr5	138149384	138149467	-	138148995	138149467	A3SS	0.5	50	50	ENSMUST00000049393.15	ENSMUSG00000037007.18	Zfp113	chr5	protein_coding	zinc finger protein 113
chr5	138159452	138159637	+	138159444	138159637	A5SS	0.5	50	50	ENSMUST00000019638.15	ENSMUSG00000019494.15	Cops6	chr5	protein_coding	COP9 signalosome subunit 6
chr5	138163165	138166320	-	138166234	138166320	A3SS&ES	0.5	50	50	ENSMUST00000000505.16	ENSMUSG00000029730.17	Mcm7	chr5	protein_coding	minichromosome maintenance complex component 7
chr5	138168684	138169988	-	138168658	138169988	A3SS	0.5	50	50	ENSMUST00000000505.16	ENSMUSG00000029730.17	Mcm7	chr5	protein_coding	minichromosome maintenance complex component 7
chr5	138167986	138169072	-	138167986	138168579	A5SS&ES	0.5	50	50	ENSMUST00000000505.16	ENSMUSG00000029730.17	Mcm7	chr5	protein_coding	minichromosome maintenance complex component 7
chr5	138168658	138169072	-	138168658	138169988	A5SS	0.33	50	50	ENSMUST00000000505.16	ENSMUSG00000029730.17	Mcm7	chr5	protein_coding	minichromosome maintenance complex component 7
chr5	138168658	138169450	-	138168658	138169988	A5SS	0.33	50	50	ENSMUST00000000505.16	ENSMUSG00000029730.17	Mcm7	chr5	protein_coding	minichromosome maintenance complex component 7
chr5	138168658	138169072	-	138168658	138169450	A5SS	0.33	50	50	ENSMUST00000153867.8	ENSMUSG00000029730.17	Mcm7	chr5	protein_coding	minichromosome maintenance complex component 7
chr5	138167986	138169072	-	138167986;138168658	138168579;138169072	ES	0.5	50	50	ENSMUST00000139983.8	ENSMUSG00000029730.17	Mcm7	chr5	protein_coding	minichromosome maintenance complex component 7
chr5	138171155	138173012	+	138171155;138171330	138171234;138173012	ES	0.5	50	50	ENSMUST00000019662.11	ENSMUSG00000019518.12	Ap4m1	chr5	protein_coding	adaptor-related protein complex AP-4, mu 1
chr5	138170741	138171049	+	138170699	138171049	A5SS	0.5	50	50	ENSMUST00000019662.11	ENSMUSG00000019518.12	Ap4m1	chr5	protein_coding	adaptor-related protein complex AP-4, mu 1
chr5	138171155	138173012	+	138171155	138171234	3pMXE	0.5	50	50	ENSMUST00000157031.2	ENSMUSG00000019518.12	Ap4m1	chr5	protein_coding	adaptor-related protein complex AP-4, mu 1
chr5	138182809	138185653	-	138182809	138185432	5pMXE	0.2	50	50	ENSMUST00000048698.14	ENSMUSG00000036980.14	Taf6	chr5	protein_coding	TATA-box binding protein associated factor 6
chr5	138177222	138177675	-	138177409	138177675	A3SS	0.5	50	50	ENSMUST00000048698.14	ENSMUSG00000036980.14	Taf6	chr5	protein_coding	TATA-box binding protein associated factor 6
chr5	138181632	138181894	-	138181632	138181830	A5SS	0.5	50	50	ENSMUST00000048698.14	ENSMUSG00000036980.14	Taf6	chr5	protein_coding	TATA-box binding protein associated factor 6
chr5	138182809	138185037	-	138182809	138185432	A5SS	0.2	50	50	ENSMUST00000048698.14	ENSMUSG00000036980.14	Taf6	chr5	protein_coding	TATA-box binding protein associated factor 6
chr5	138182809	138185224	-	138182809	138185432	A5SS	0.2	50	50	ENSMUST00000048698.14	ENSMUSG00000036980.14	Taf6	chr5	protein_coding	TATA-box binding protein associated factor 6
chr5	138182809	138185346	-	138182809	138185432	A5SS	0.2	50	50	ENSMUST00000048698.14	ENSMUSG00000036980.14	Taf6	chr5	protein_coding	TATA-box binding protein associated factor 6
chr5	138182809	138185037	-	138182809	138185653	A5SS	0.2	50	50	ENSMUST00000110936.8	ENSMUSG00000036980.14	Taf6	chr5	protein_coding	TATA-box binding protein associated factor 6
chr5	138182809	138185224	-	138182809	138185653	A5SS	0.2	50	50	ENSMUST00000110936.8	ENSMUSG00000036980.14	Taf6	chr5	protein_coding	TATA-box binding protein associated factor 6
chr5	138182809	138185346	-	138182809	138185653	A5SS	0.2	50	50	ENSMUST00000110936.8	ENSMUSG00000036980.14	Taf6	chr5	protein_coding	TATA-box binding protein associated factor 6
chr5	138182809	138185224	-	138182809	138185037	A5SS	0.2	50	50	ENSMUST00000153117.8	ENSMUSG00000036980.14	Taf6	chr5	protein_coding	TATA-box binding protein associated factor 6
chr5	138182809	138185346	-	138182809	138185037	A5SS	0.2	50	50	ENSMUST00000153117.8	ENSMUSG00000036980.14	Taf6	chr5	protein_coding	TATA-box binding protein associated factor 6
chr5	138182809	138185346	-	138182809	138185224	A5SS	0.2	50	50	ENSMUST00000123415.8	ENSMUSG00000036980.14	Taf6	chr5	protein_coding	TATA-box binding protein associated factor 6
chr5	138228204	138237499	+	138228805	138237499	A5SS	0.33	50	50	ENSMUST00000162519.2	ENSMUSG00000047592.18	Nxpe5	chr5	protein_coding	neurexophilin and PC-esterase domain family, member 5
chr5	138228767	138237499	+	138228805	138237499	A5SS	0.33	50	50	ENSMUST00000162519.2	ENSMUSG00000047592.18	Nxpe5	chr5	protein_coding	neurexophilin and PC-esterase domain family, member 5
chr5	138228204;138228767	138228595;138237499	+	138228204	138237499	cassetteExon	0.5	100	100	ENSMUST00000110929.9	ENSMUSG00000047592.18	Nxpe5	chr5	protein_coding	neurexophilin and PC-esterase domain family, member 5
chr5	138228204;138228805	138228595;138237499	+	138228204	138237499	cassetteExon	0.5	100	100	ENSMUST00000110929.9	ENSMUSG00000047592.18	Nxpe5	chr5	protein_coding	neurexophilin and PC-esterase domain family, member 5
chr5	138239259;138242638	138242573;138246979	+	138239259	138246979	cassetteExon	0.5	100	100	ENSMUST00000110929.9	ENSMUSG00000047592.18	Nxpe5	chr5	protein_coding	neurexophilin and PC-esterase domain family, member 5
chr5	138259251	138260064	-	138259251;138259978	138259815;138260064	ES	0.5	50	50	ENSMUST00000048421.14	ENSMUSG00000036948.18	Map11	chr5	protein_coding	microtubule associated protein 11
chr5	138261006	138261329	-	138261006;138261238	138261109;138261329	ES	0.5	50	50	ENSMUST00000048421.14	ENSMUSG00000036948.18	Map11	chr5	protein_coding	microtubule associated protein 11
chr5	138259251	138260064	-	138259978	138260064	A3SS	0.5	50	50	ENSMUST00000159534.4	ENSMUSG00000036948.18	Map11	chr5	protein_coding	microtubule associated protein 11
chr5	138262363;138263899	138263690;138264019	+	138262363	138264019	cassetteExon	0.5	100	100	ENSMUST00000124298.2	ENSMUSG00000085227.2	6330418K02Rik	chr5	lncRNA	RIKEN cDNA 6330418K02 gene
chr5	138262415	138264019	+	138262363	138264019	A5SS	0.33	50	50	ENSMUST00000124298.2	ENSMUSG00000085227.2	6330418K02Rik	chr5	lncRNA	RIKEN cDNA 6330418K02 gene
chr5	138262363	138264019	+	138262363	138263690	A3SS	0.5	50	50	ENSMUST00000125662.2	ENSMUSG00000085227.2	6330418K02Rik	chr5	lncRNA	RIKEN cDNA 6330418K02 gene
chr5	138263899	138264019	+	138262415	138264019	A5SS	0.33	50	50	ENSMUST00000144460.2	ENSMUSG00000085227.2	6330418K02Rik	chr5	lncRNA	RIKEN cDNA 6330418K02 gene
chr5	138262363	138264019	+	138263899	138264019	5pMXE	0.33	50	50	ENSMUST00000138911.2	ENSMUSG00000085227.2	6330418K02Rik	chr5	lncRNA	RIKEN cDNA 6330418K02 gene
chr5	138264568	138269541	-	138264568;138269333	138269030;138269541	ES	0.5	50	50	ENSMUST00000161647.8	ENSMUSG00000075593.11	Gal3st4	chr5	protein_coding	galactose-3-O-sulfotransferase 4
chr5	138269856	138270994	-	138269642	138270994	A3SS	0.5	50	50	ENSMUST00000161647.8	ENSMUSG00000075593.11	Gal3st4	chr5	protein_coding	galactose-3-O-sulfotransferase 4
chr5	138269856	138270798	-	138269856	138270994	A5SS	0.5	50	50	ENSMUST00000161279.8	ENSMUSG00000075593.11	Gal3st4	chr5	protein_coding	galactose-3-O-sulfotransferase 4
chr5	138264568	138269541	-	138269333	138269541	3pMXE	0.5	50	50	ENSMUST00000161665.2	ENSMUSG00000075593.11	Gal3st4	chr5	protein_coding	galactose-3-O-sulfotransferase 4
chr5	138274600;138275008	138274846;138275669	-	138274600	138275669	cassetteExon	0.5	100	100	ENSMUST00000159067.5	ENSMUSG00000106247.2	Gm43720	chr5	protein_coding	predicted gene 43720
chr5	138276716	138277101	-	138276799	138277101	A3SS	0.5	50	50	ENSMUST00000159067.5	ENSMUSG00000106247.2	Gm43720	chr5	protein_coding	predicted gene 43720
chr5	138272831	138273744	-	138272831	138273717	A5SS	0.5	50	50	ENSMUST00000159067.5	ENSMUSG00000106247.2	Gm43720	chr5	protein_coding	predicted gene 43720
chr5	138274337	138274448	-	138274337	138274470	A5SS	0.5	50	50	ENSMUST00000159067.5	ENSMUSG00000106247.2	Gm43720	chr5	protein_coding	predicted gene 43720
chr5	138274631	138274846	-	138274600	138274846	A3SS	0.5	50	50	ENSMUST00000161827.8	ENSMUSG00000029510.16	Gpc2	chr5	protein_coding	glypican 2 (cerebroglycan)
chr5	138274600	138275669	-	138274600	138274846	A5SS	0.5	50	50	ENSMUST00000161055.3	ENSMUSG00000029510.16	Gpc2	chr5	protein_coding	glypican 2 (cerebroglycan)
chr5	138274600	138275669	-	138275008	138275669	3pMXE	0.5	50	50	ENSMUST00000159350.2	ENSMUSG00000029510.16	Gpc2	chr5	protein_coding	glypican 2 (cerebroglycan)
chr5	138288529;138288732	138288628;138288971	+	138288529	138288971	cassetteExon	0.5	100	100	ENSMUST00000160729.8	ENSMUSG00000036928.15	Stag3	chr5	protein_coding	stromal antigen 3
chr5	138278846	138280127	+	138278882	138280127	A5SS	0.33	50	50	ENSMUST00000160729.8	ENSMUSG00000036928.15	Stag3	chr5	protein_coding	stromal antigen 3
chr5	138278916	138280127	+	138278882	138280127	A5SS	0.33	50	50	ENSMUST00000160729.8	ENSMUSG00000036928.15	Stag3	chr5	protein_coding	stromal antigen 3
chr5	138306917	138307461	+	138306917;138307190	138307089;138307461	ES	0.5	50	50	ENSMUST00000161113.8	ENSMUSG00000036928.15	Stag3	chr5	protein_coding	stromal antigen 3
chr5	138295687;138295964	138295885;138296228	+	138295687	138296228	cassetteExon	0.5	100	100	ENSMUST00000161113.8	ENSMUSG00000036928.15	Stag3	chr5	protein_coding	stromal antigen 3
chr5	138278916	138280167	+	138278916	138280127	A3SS	0.5	50	50	ENSMUST00000161113.8	ENSMUSG00000036928.15	Stag3	chr5	protein_coding	stromal antigen 3
chr5	138297485	138297582	+	138297485	138297601	A3SS	0.5	50	50	ENSMUST00000161113.8	ENSMUSG00000036928.15	Stag3	chr5	protein_coding	stromal antigen 3
chr5	138278846	138280127	+	138278916	138280127	A5SS	0.33	50	50	ENSMUST00000161113.8	ENSMUSG00000036928.15	Stag3	chr5	protein_coding	stromal antigen 3
chr5	138307630	138309996	+	138307533	138309996	A5SS	0.5	50	50	ENSMUST00000161113.8	ENSMUSG00000036928.15	Stag3	chr5	protein_coding	stromal antigen 3
chr5	138297690;138298286	138297915;138298386	+	138297690	138298386	cassetteExon	0.5	100	100	ENSMUST00000159483.8	ENSMUSG00000036928.15	Stag3	chr5	protein_coding	stromal antigen 3
chr5	138453351	138454141	+	138453351	138454137	A3SS	0.5	50	50	ENSMUST00000085856.12	ENSMUSG00000036898.17	Zfp157	chr5	protein_coding	zinc finger protein 157
chr5	138440128	138443014	+	138439891	138443014	A5SS	0.5	50	50	ENSMUST00000085856.12	ENSMUSG00000036898.17	Zfp157	chr5	protein_coding	zinc finger protein 157
chr5	138453355	138454137	+	138453351	138454137	A5SS	0.5	50	50	ENSMUST00000085856.12	ENSMUSG00000036898.17	Zfp157	chr5	protein_coding	zinc finger protein 157
chr5	138610427	138615317	-	138610427;138614827	138614732;138615317	ES	0.25	50	50	ENSMUST00000110905.9	ENSMUSG00000058291.15	Zfp68	chr5	protein_coding	zinc finger protein 68
chr5	138614821	138615317	-	138614827	138615317	A3SS	0.25	50	50	ENSMUST00000110905.9	ENSMUSG00000058291.15	Zfp68	chr5	protein_coding	zinc finger protein 68
chr5	138614876	138615317	-	138614827	138615317	A3SS	0.25	50	50	ENSMUST00000110905.9	ENSMUSG00000058291.15	Zfp68	chr5	protein_coding	zinc finger protein 68
chr5	138610427;138614821	138614732;138615317	-	138610427	138615317	cassetteExon	0.5	100	100	ENSMUST00000085852.11	ENSMUSG00000058291.15	Zfp68	chr5	protein_coding	zinc finger protein 68
chr5	138610427;138614876	138614732;138615317	-	138610427	138615317	cassetteExon	0.5	100	100	ENSMUST00000085852.11	ENSMUSG00000058291.15	Zfp68	chr5	protein_coding	zinc finger protein 68
chr5	138614876	138615317	-	138614821	138615317	A3SS	0.25	50	50	ENSMUST00000063262.11	ENSMUSG00000058291.15	Zfp68	chr5	protein_coding	zinc finger protein 68
chr5	138637849	138644376	+	138637849	138638326	3pMXE	0.5	50	50	ENSMUST00000200521.5	ENSMUSG00000056014.16	A430033K04Rik	chr5	protein_coding	RIKEN cDNA A430033K04 gene
chr5	138741980;138742534	138742457;138743556	+	138741980	138743556	cassetteExon	0.5	100	100	ENSMUST00000026972.8	ENSMUSG00000025854.16	Fam20c	chr5	protein_coding	FAM20C, golgi associated secretory pathway kinase
chr5	138772355	138778942	+	138752462	138778942	A5SS	0.33	50	50	ENSMUST00000026972.8	ENSMUSG00000025854.16	Fam20c	chr5	protein_coding	FAM20C, golgi associated secretory pathway kinase
chr5	138774929	138778942	+	138752462	138778942	A5SS	0.33	50	50	ENSMUST00000026972.8	ENSMUSG00000025854.16	Fam20c	chr5	protein_coding	FAM20C, golgi associated secretory pathway kinase
chr5	138774929	138778942	+	138772355	138778942	A5SS	0.33	50	50	ENSMUST00000159176.8	ENSMUSG00000025854.16	Fam20c	chr5	protein_coding	FAM20C, golgi associated secretory pathway kinase
chr5	138979139	138981489	-	138979139	138980464	5pMXE	0.25	50	50	ENSMUST00000076095.14	ENSMUSG00000025856.16	Pdgfa	chr5	protein_coding	platelet derived growth factor, alpha
chr5	138962982;138964445	138964377;138964901	-	138962982	138964901	cassetteExon	0.5	100	100	ENSMUST00000076095.14	ENSMUSG00000025856.16	Pdgfa	chr5	protein_coding	platelet derived growth factor, alpha
chr5	138979139	138979946	-	138979139	138980464	A5SS	0.25	50	50	ENSMUST00000076095.14	ENSMUSG00000025856.16	Pdgfa	chr5	protein_coding	platelet derived growth factor, alpha
chr5	138979139	138980154	-	138979139	138980464	A5SS	0.25	50	50	ENSMUST00000076095.14	ENSMUSG00000025856.16	Pdgfa	chr5	protein_coding	platelet derived growth factor, alpha
chr5	138979139	138981489	-	138979139;138980593	138980464;138981489	ES	0.5	50	50	ENSMUST00000110897.8	ENSMUSG00000025856.16	Pdgfa	chr5	protein_coding	platelet derived growth factor, alpha
chr5	138980593	138981954	-	138980593	138981489	5pMXE	0.5	50	50	ENSMUST00000110897.8	ENSMUSG00000025856.16	Pdgfa	chr5	protein_coding	platelet derived growth factor, alpha
chr5	138979139	138980154	-	138979139	138979946	5pMXE	0.25	50	50	ENSMUST00000144934.8	ENSMUSG00000025856.16	Pdgfa	chr5	protein_coding	platelet derived growth factor, alpha
chr5	138979139	138981489	-	138979139	138979946	5pMXE	0.25	50	50	ENSMUST00000144934.8	ENSMUSG00000025856.16	Pdgfa	chr5	protein_coding	platelet derived growth factor, alpha
chr5	138979139	138981489	-	138979139	138980154	5pMXE	0.25	50	50	ENSMUST00000124080.8	ENSMUSG00000025856.16	Pdgfa	chr5	protein_coding	platelet derived growth factor, alpha
chr5	138979139;138980593	138980154;138981489	-	138979139	138981489	cassetteExon	0.5	100	100	ENSMUST00000132051.2	ENSMUSG00000025856.16	Pdgfa	chr5	protein_coding	platelet derived growth factor, alpha
chr5	139113540	139115723	-	139113540	139115399	5pMXE	0.16	50	50	ENSMUST00000026973.14	ENSMUSG00000025855.14	Prkar1b	chr5	protein_coding	protein kinase, cAMP dependent regulatory, type I beta
chr5	139113540	139116035	-	139113540	139115399	5pMXE	0.16	50	50	ENSMUST00000026973.14	ENSMUSG00000025855.14	Prkar1b	chr5	protein_coding	protein kinase, cAMP dependent regulatory, type I beta
chr5	139113540	139116049	-	139113540	139115399	5pMXE	0.16	50	50	ENSMUST00000026973.14	ENSMUSG00000025855.14	Prkar1b	chr5	protein_coding	protein kinase, cAMP dependent regulatory, type I beta
chr5	139113540	139116262	-	139113540	139115399	5pMXE	0.16	50	50	ENSMUST00000026973.14	ENSMUSG00000025855.14	Prkar1b	chr5	protein_coding	protein kinase, cAMP dependent regulatory, type I beta
chr5	139113540	139135674	-	139113540	139115399	5pMXE	0.16	50	50	ENSMUST00000026973.14	ENSMUSG00000025855.14	Prkar1b	chr5	protein_coding	protein kinase, cAMP dependent regulatory, type I beta
chr5	139005892	139009424	-	139005892	139022789	A5SS	0.5	50	50	ENSMUST00000026973.14	ENSMUSG00000025855.14	Prkar1b	chr5	protein_coding	protein kinase, cAMP dependent regulatory, type I beta
chr5	139094409	139098328	-	139094409	139113342	A5SS	0.33	50	50	ENSMUST00000026973.14	ENSMUSG00000025855.14	Prkar1b	chr5	protein_coding	protein kinase, cAMP dependent regulatory, type I beta
chr5	139094409	139099664	-	139094409	139113342	A5SS	0.33	50	50	ENSMUST00000026973.14	ENSMUSG00000025855.14	Prkar1b	chr5	protein_coding	protein kinase, cAMP dependent regulatory, type I beta
chr5	139113540	139116262	-	139113540	139116035	5pMXE	0.16	50	50	ENSMUST00000110890.8	ENSMUSG00000025855.14	Prkar1b	chr5	protein_coding	protein kinase, cAMP dependent regulatory, type I beta
chr5	139113540	139135674	-	139113540	139116035	5pMXE	0.16	50	50	ENSMUST00000110890.8	ENSMUSG00000025855.14	Prkar1b	chr5	protein_coding	protein kinase, cAMP dependent regulatory, type I beta
chr5	139113540	139115723	-	139113540	139116035	A5SS	0.16	50	50	ENSMUST00000110890.8	ENSMUSG00000025855.14	Prkar1b	chr5	protein_coding	protein kinase, cAMP dependent regulatory, type I beta
chr5	139113540	139116049	-	139113540	139116035	A5SS	0.16	50	50	ENSMUST00000110890.8	ENSMUSG00000025855.14	Prkar1b	chr5	protein_coding	protein kinase, cAMP dependent regulatory, type I beta
chr5	139094409	139098328	-	139094409	139099664	A5SS	0.33	50	50	ENSMUST00000110889.8	ENSMUSG00000025855.14	Prkar1b	chr5	protein_coding	protein kinase, cAMP dependent regulatory, type I beta
chr5	139113540	139116049	-	139113540	139115723	5pMXE	0.16	50	50	ENSMUST00000129851.8	ENSMUSG00000025855.14	Prkar1b	chr5	protein_coding	protein kinase, cAMP dependent regulatory, type I beta
chr5	139113540	139116262	-	139113540	139115723	5pMXE	0.16	50	50	ENSMUST00000129851.8	ENSMUSG00000025855.14	Prkar1b	chr5	protein_coding	protein kinase, cAMP dependent regulatory, type I beta
chr5	139113540	139135674	-	139113540	139115723	5pMXE	0.16	50	50	ENSMUST00000129851.8	ENSMUSG00000025855.14	Prkar1b	chr5	protein_coding	protein kinase, cAMP dependent regulatory, type I beta
chr5	139113540	139135674	-	139113540	139116262	5pMXE	0.16	50	50	ENSMUST00000147505.8	ENSMUSG00000025855.14	Prkar1b	chr5	protein_coding	protein kinase, cAMP dependent regulatory, type I beta
chr5	139113540	139116049	-	139113540	139116262	A5SS	0.16	50	50	ENSMUST00000147505.8	ENSMUSG00000025855.14	Prkar1b	chr5	protein_coding	protein kinase, cAMP dependent regulatory, type I beta
chr5	139134149	139135674	-	139113540	139135674	A3SS	0.5	50	50	ENSMUST00000155833.8	ENSMUSG00000025855.14	Prkar1b	chr5	protein_coding	protein kinase, cAMP dependent regulatory, type I beta
chr5	139113540	139116049	-	139113540	139135674	A5SS	0.16	50	50	ENSMUST00000155833.8	ENSMUSG00000025855.14	Prkar1b	chr5	protein_coding	protein kinase, cAMP dependent regulatory, type I beta
chr5	139152938	139155929	+	139151958	139155929	A5SS	0.5	50	50	ENSMUST00000026975.11	ENSMUSG00000025857.11	Dnaaf5	chr5	protein_coding	dynein, axonemal assembly factor 5
chr5	139212640	139216528	+	139212640;139215699	139215508;139216528	ES	0.5	50	50	ENSMUST00000058716.14	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139216593	139219226	+	139216593;139216992	139216882;139219226	ES	0.33	50	50	ENSMUST00000058716.14	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139227782	139232448	+	139227782;139231199	139231084;139232448	ES	0.5	50	50	ENSMUST00000058716.14	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139186454;139196082	139195949;139200913	+	139186454	139200913	cassetteExon	0.5	100	100	ENSMUST00000058716.14	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139186454;139199962	139199866;139200913	+	139186454	139200913	cassetteExon	0.5	100	100	ENSMUST00000058716.14	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139201009	139209333	+	139201009	139209349	A3SS	0.5	50	50	ENSMUST00000058716.14	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139212359	139212434	+	139212359	139212461	A3SS	0.5	50	50	ENSMUST00000058716.14	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139212640	139213288	+	139212640	139215508	A3SS	0.16	50	50	ENSMUST00000058716.14	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139212640	139216363	+	139212640	139215508	A3SS&ES	0.16	50	50	ENSMUST00000058716.14	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139223677	139224586	+	139223677	139224583	A3SS	0.5	50	50	ENSMUST00000058716.14	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139197829	139200913	+	139186454	139200913	A5SS	0.16	50	50	ENSMUST00000058716.14	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139197944	139200913	+	139186454	139200913	A5SS	0.16	50	50	ENSMUST00000058716.14	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139198199	139200913	+	139186454	139200913	A5SS	0.16	50	50	ENSMUST00000058716.14	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139212640	139219656	+	139212640;139219324	139219226;139219656	ES	0.33	50	50	ENSMUST00000110883.9	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139212640;139215699	139215508;139219656	+	139212640;139219324	139219226;139219656	MXE	0.5	100	100	ENSMUST00000110883.9	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139212640;139216593	139216363;139219226	+	139212640	139219226	cassetteExon	0.5	100	100	ENSMUST00000110883.9	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139212640;139216593	139216528;139219226	+	139212640	139219226	cassetteExon	0.5	100	100	ENSMUST00000110883.9	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139212640;139216992	139216528;139219226	+	139212640	139219226	cassetteExon	0.5	100	100	ENSMUST00000110883.9	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139212640	139213288	+	139212640	139219226	A3SS	0.16	50	50	ENSMUST00000110883.9	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139212640	139216363	+	139212640	139213288	3pMXE	0.16	50	50	ENSMUST00000100517.10	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139212640	139216528	+	139212640	139213288	3pMXE	0.16	50	50	ENSMUST00000100517.10	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139212640	139219656	+	139212640	139213288	3pMXE	0.16	50	50	ENSMUST00000100517.10	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139186454;139196082	139195949;139200913	+	139186454;139199962	139199866;139200913	MXE	0.5	100	100	ENSMUST00000127045.8	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139197829	139200913	+	139199962	139200913	A5SS&ES	0.16	50	50	ENSMUST00000127045.8	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139197944	139200913	+	139199962	139200913	A5SS&ES	0.16	50	50	ENSMUST00000127045.8	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139198199	139200913	+	139199962	139200913	A5SS&ES	0.16	50	50	ENSMUST00000127045.8	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139212640;139215699	139215508;139219656	+	139212640;139219324	139216528;139219656	MXE	0.5	100	100	ENSMUST00000078690.13	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139212640	139216363	+	139212640	139216528	A3SS	0.16	50	50	ENSMUST00000078690.13	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139197829	139200913	+	139196082	139200913	A5SS	0.16	50	50	ENSMUST00000146715.8	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139197944	139200913	+	139196082	139200913	A5SS	0.16	50	50	ENSMUST00000146715.8	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139198199	139200913	+	139196082	139200913	A5SS	0.16	50	50	ENSMUST00000146715.8	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139197829	139200913	+	139197829	139197945	3pMXE	0.5	50	50	ENSMUST00000136311.2	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139197829	139200913	+	139197944	139200913	A5SS	0.16	50	50	ENSMUST00000148772.8	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139198199	139200913	+	139197944	139200913	A5SS	0.16	50	50	ENSMUST00000148772.8	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139197829;139198199	139197945;139200913	+	139197829	139200913	cassetteExon	0.5	100	100	ENSMUST00000110882.8	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139212640;139215699	139215508;139219656	+	139212640	139219656	cassetteExon	0.5	100	100	ENSMUST00000110882.8	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139212640	139216363	+	139212640	139219656	A3SS	0.16	50	50	ENSMUST00000110882.8	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139212640	139216528	+	139212640	139219656	A3SS	0.16	50	50	ENSMUST00000110882.8	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139197829	139200913	+	139198199	139200913	5pMXE	0.16	50	50	ENSMUST00000129079.2	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139212640	139219226	+	139212640	139216363	3pMXE	0.16	50	50	ENSMUST00000153469.4	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139212640	139216528	+	139212640	139215508	3pMXE	0.16	50	50	ENSMUST00000135720.3	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139212640	139219226	+	139212640	139215508	3pMXE	0.16	50	50	ENSMUST00000135720.3	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139212640	139219656	+	139212640	139215508	3pMXE	0.16	50	50	ENSMUST00000135720.3	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139215699	139216528	+	139215699	139219656	A3SS	0.5	50	50	ENSMUST00000135926.2	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139212640	139219226	+	139216992	139219226	5pMXE	0.33	50	50	ENSMUST00000126108.2	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139216593	139219226	+	139216992	139219226	5pMXE	0.33	50	50	ENSMUST00000126108.2	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139227782	139232448	+	139227782	139231084	3pMXE	0.5	50	50	ENSMUST00000128817.8	ENSMUSG00000036817.15	Sun1	chr5	protein_coding	Sad1 and UNC84 domain containing 1
chr5	139248314	139248628	+	139248314	139248625	A3SS	0.5	50	50	ENSMUST00000026976.12	ENSMUSG00000025858.13	Get4	chr5	protein_coding	golgi to ER traffic protein 4
chr5	139239356	139248236	+	139238374	139248236	A5SS	0.5	50	50	ENSMUST00000026976.12	ENSMUSG00000025858.13	Get4	chr5	protein_coding	golgi to ER traffic protein 4
chr5	139259558	139260202	-	139259561	139260202	A3SS	0.5	50	50	ENSMUST00000151450.8	ENSMUSG00000056413.17	Adap1	chr5	protein_coding	ArfGAP with dual PH domains 1
chr5	139288150	139288846	-	139288150	139288784	A5SS&ES	0.33	50	50	ENSMUST00000151450.8	ENSMUSG00000056413.17	Adap1	chr5	protein_coding	ArfGAP with dual PH domains 1
chr5	139288150	139291747	-	139288150	139288784	A5SS&ES	0.33	50	50	ENSMUST00000151450.8	ENSMUSG00000056413.17	Adap1	chr5	protein_coding	ArfGAP with dual PH domains 1
chr5	139288150	139288784	-	139288150	139293497	A5SS	0.25	50	50	ENSMUST00000110865.2	ENSMUSG00000056413.17	Adap1	chr5	protein_coding	ArfGAP with dual PH domains 1
chr5	139288150	139288846	-	139288150	139293497	A5SS	0.25	50	50	ENSMUST00000110865.2	ENSMUSG00000056413.17	Adap1	chr5	protein_coding	ArfGAP with dual PH domains 1
chr5	139288150	139291747	-	139288150	139293497	A5SS	0.25	50	50	ENSMUST00000110865.2	ENSMUSG00000056413.17	Adap1	chr5	protein_coding	ArfGAP with dual PH domains 1
chr5	139288150	139291747	-	139288150	139288846	5pMXE	0.25	50	50	ENSMUST00000196271.5	ENSMUSG00000056413.17	Adap1	chr5	protein_coding	ArfGAP with dual PH domains 1
chr5	139324130	139330827	-	139324130;139328429	139328318;139330827	ES	0.33	50	50	ENSMUST00000049630.13	ENSMUSG00000045438.13	Cox19	chr5	protein_coding	cytochrome c oxidase assembly protein 19
chr5	139328429	139336966	-	139328429	139330827	5pMXE	0.33	50	50	ENSMUST00000049630.13	ENSMUSG00000045438.13	Cox19	chr5	protein_coding	cytochrome c oxidase assembly protein 19
chr5	139324130;139325331	139325220;139328318	-	139324130	139328318	cassetteExon	0.5	100	100	ENSMUST00000049630.13	ENSMUSG00000045438.13	Cox19	chr5	protein_coding	cytochrome c oxidase assembly protein 19
chr5	139328429;139328987	139328876;139330827	-	139328429	139330827	cassetteExon	0.5	100	100	ENSMUST00000049630.13	ENSMUSG00000045438.13	Cox19	chr5	protein_coding	cytochrome c oxidase assembly protein 19
chr5	139324130	139324495	-	139324130	139328318	A5SS	0.25	50	50	ENSMUST00000049630.13	ENSMUSG00000045438.13	Cox19	chr5	protein_coding	cytochrome c oxidase assembly protein 19
chr5	139328987	139330827	-	139324130	139330827	A3SS	0.33	50	50	ENSMUST00000197520.2	ENSMUSG00000045438.13	Cox19	chr5	protein_coding	cytochrome c oxidase assembly protein 19
chr5	139324130	139324495	-	139324130	139330827	A5SS	0.25	50	50	ENSMUST00000197520.2	ENSMUSG00000045438.13	Cox19	chr5	protein_coding	cytochrome c oxidase assembly protein 19
chr5	139324130	139325220	-	139324130	139330827	A5SS	0.25	50	50	ENSMUST00000197520.2	ENSMUSG00000045438.13	Cox19	chr5	protein_coding	cytochrome c oxidase assembly protein 19
chr5	139324130	139330827	-	139324130	139328318	A5SS&ES	0.25	50	50	ENSMUST00000198966.5	ENSMUSG00000045438.13	Cox19	chr5	protein_coding	cytochrome c oxidase assembly protein 19
chr5	139328429	139328876	-	139328429	139336966	A5SS	0.33	50	50	ENSMUST00000198966.5	ENSMUSG00000045438.13	Cox19	chr5	protein_coding	cytochrome c oxidase assembly protein 19
chr5	139325140	139325220	-	139324130	139325220	A3SS	0.5	50	50	ENSMUST00000133951.2	ENSMUSG00000045438.13	Cox19	chr5	protein_coding	cytochrome c oxidase assembly protein 19
chr5	139324130	139324495	-	139324130	139325220	A5SS	0.25	50	50	ENSMUST00000133951.2	ENSMUSG00000045438.13	Cox19	chr5	protein_coding	cytochrome c oxidase assembly protein 19
chr5	139324130	139330827	-	139328429	139330827	3pMXE	0.33	50	50	ENSMUST00000152715.2	ENSMUSG00000045438.13	Cox19	chr5	protein_coding	cytochrome c oxidase assembly protein 19
chr5	139401550	139441172	-	139349918	139441172	A3SS	0.5	50	50	ENSMUST00000066052.12	ENSMUSG00000053553.12	3110082I17Rik	chr5	protein_coding	RIKEN cDNA 3110082I17 gene
chr5	139364260	139378177	+	139364260	139364623	3pMXE	0.5	50	50	ENSMUST00000137254.2	ENSMUSG00000044197.9	Gpr146	chr5	protein_coding	G protein-coupled receptor 146
chr5	139366498	139378177	+	139364260	139378177	A5SS	0.33	50	50	ENSMUST00000138631.2	ENSMUSG00000044197.9	Gpr146	chr5	protein_coding	G protein-coupled receptor 146
chr5	139375810	139378177	+	139364260	139378177	A5SS	0.33	50	50	ENSMUST00000138631.2	ENSMUSG00000044197.9	Gpr146	chr5	protein_coding	G protein-coupled receptor 146
chr5	139375810	139378177	+	139366498	139378177	A5SS	0.33	50	50	ENSMUST00000051293.8	ENSMUSG00000044197.9	Gpr146	chr5	protein_coding	G protein-coupled receptor 146
chr5	139392327	139396588	+	139392327	139400028	A3SS	0.5	50	50	ENSMUST00000163940.2	ENSMUSG00000044092.9	C130050O18Rik	chr5	protein_coding	RIKEN cDNA C130050O18 gene
chr5	139398102	139400028	+	139392327	139400028	A5SS	0.5	50	50	ENSMUST00000163940.2	ENSMUSG00000044092.9	C130050O18Rik	chr5	protein_coding	RIKEN cDNA C130050O18 gene
chr5	139392327	139400028	+	139392327;139398102	139396588;139400028	ES	0.5	50	50	ENSMUST00000164078.2	ENSMUSG00000044092.9	C130050O18Rik	chr5	protein_coding	RIKEN cDNA C130050O18 gene
chr5	139409109	139409421	+	139409109	139409416	A3SS	0.5	50	50	ENSMUST00000066211.5	ENSMUSG00000053647.5	Gper1	chr5	protein_coding	G protein-coupled estrogen receptor 1
chr5	139464353;139464910	139464540;139467721	-	139464353	139467721	cassetteExon	0.5	100	100	ENSMUST00000079996.13	ENSMUSG00000053581.14	Zfand2a	chr5	protein_coding	zinc finger, AN1-type domain 2A
chr5	139468552	139470032	-	139468552	139470021	A5SS	0.5	50	50	ENSMUST00000079996.13	ENSMUSG00000053581.14	Zfand2a	chr5	protein_coding	zinc finger, AN1-type domain 2A
chr5	139468519	139470032	-	139468552	139470032	A3SS	0.5	50	50	ENSMUST00000110851.8	ENSMUSG00000053581.14	Zfand2a	chr5	protein_coding	zinc finger, AN1-type domain 2A
chr5	139464353	139467721	-	139464353	139464540	5pMXE	0.5	50	50	ENSMUST00000132454.2	ENSMUSG00000053581.14	Zfand2a	chr5	protein_coding	zinc finger, AN1-type domain 2A
chr5	139464353	139467721	-	139464910	139467721	3pMXE	0.5	50	50	ENSMUST00000143889.2	ENSMUSG00000053581.14	Zfand2a	chr5	protein_coding	zinc finger, AN1-type domain 2A
chr5	139707751	139721773	-	139707751	139718460	5pMXE	0.5	50	50	ENSMUST00000170773.6	ENSMUSG00000036718.18	Micall2	chr5	protein_coding	MICAL-like 2
chr5	139696572	139697309	-	139696487	139697309	A3SS	0.5	50	50	ENSMUST00000170773.6	ENSMUSG00000036718.18	Micall2	chr5	protein_coding	MICAL-like 2
chr5	139757484	139757571	-	139757478	139757571	A3SS	0.5	50	50	ENSMUST00000072607.9	ENSMUSG00000029547.11	Ints1	chr5	protein_coding	integrator complex subunit 1
chr5	139784038	139784894	+	139777467	139784894	A5SS	0.5	50	50	ENSMUST00000018287.10	ENSMUSG00000018143.11	Mafk	chr5	protein_coding	v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)
chr5	139798947	139805503	-	139798947	139799808	5pMXE	0.25	50	50	ENSMUST00000044002.10	ENSMUSG00000036687.14	Tmem184a	chr5	protein_coding	transmembrane protein 184a
chr5	139798947	139811883	-	139798947	139799808	5pMXE	0.25	50	50	ENSMUST00000044002.10	ENSMUSG00000036687.14	Tmem184a	chr5	protein_coding	transmembrane protein 184a
chr5	139798947	139799683	-	139798947	139799808	A5SS	0.25	50	50	ENSMUST00000044002.10	ENSMUSG00000036687.14	Tmem184a	chr5	protein_coding	transmembrane protein 184a
chr5	139798947	139805503	-	139798947	139799683	5pMXE	0.25	50	50	ENSMUST00000146780.3	ENSMUSG00000036687.14	Tmem184a	chr5	protein_coding	transmembrane protein 184a
chr5	139798947	139811883	-	139798947	139799683	5pMXE	0.25	50	50	ENSMUST00000146780.3	ENSMUSG00000036687.14	Tmem184a	chr5	protein_coding	transmembrane protein 184a
chr5	139798947	139811883	-	139798947	139805503	5pMXE	0.25	50	50	ENSMUST00000147328.2	ENSMUSG00000036687.14	Tmem184a	chr5	protein_coding	transmembrane protein 184a
chr5	139809828	139811883	-	139798947	139811883	A3SS	0.5	50	50	ENSMUST00000182839.2	ENSMUSG00000098140.2	Gm26938	chr5	protein_coding	predicted gene, 26938
chr5	139812119	139812564	-	139812119	139812477	A5SS	0.5	50	50	ENSMUST00000031531.14	ENSMUSG00000029551.14	Psmg3	chr5	protein_coding	proteasome (prosome, macropain) assembly chaperone 3
chr5	139894568	139956733	+	139893784	139956733	A5SS	0.5	50	50	ENSMUST00000050519.8	ENSMUSG00000048988.9	Elfn1	chr5	protein_coding	leucine rich repeat and fibronectin type III, extracellular 1
chr5	140074592;140091360	140091270;140102992	-	140074592	140102992	cassetteExon	0.5	100	100	ENSMUST00000110829.7	ENSMUSG00000029554.16	Mad1l1	chr5	protein_coding	MAD1 mitotic arrest deficient 1-like 1
chr5	140153116	140179669	-	140129815	140179669	A3SS	0.5	50	50	ENSMUST00000110829.7	ENSMUSG00000029554.16	Mad1l1	chr5	protein_coding	MAD1 mitotic arrest deficient 1-like 1
chr5	140118580	140160288	-	140118580	140129675	A5SS&ES	0.5	50	50	ENSMUST00000110829.7	ENSMUSG00000029554.16	Mad1l1	chr5	protein_coding	MAD1 mitotic arrest deficient 1-like 1
chr5	140129815	140160288	-	140129815	140179669	A5SS	0.5	50	50	ENSMUST00000110829.7	ENSMUSG00000029554.16	Mad1l1	chr5	protein_coding	MAD1 mitotic arrest deficient 1-like 1
chr5	140247339	140248226	-	140247339	140281542	A5SS	0.5	50	50	ENSMUST00000110829.7	ENSMUSG00000029554.16	Mad1l1	chr5	protein_coding	MAD1 mitotic arrest deficient 1-like 1
chr5	140091360	140101081	-	140091360	140102992	A5SS	0.5	50	50	ENSMUST00000031534.9	ENSMUSG00000029554.16	Mad1l1	chr5	protein_coding	MAD1 mitotic arrest deficient 1-like 1
chr5	140118580;140129815	140129675;140160288	-	140118580	140160288	cassetteExon	0.5	100	100	ENSMUST00000199237.5	ENSMUSG00000029554.16	Mad1l1	chr5	protein_coding	MAD1 mitotic arrest deficient 1-like 1
chr5	140118580	140160288	-	140129815	140160288	3pMXE	0.5	50	50	ENSMUST00000129747.2	ENSMUSG00000029554.16	Mad1l1	chr5	protein_coding	MAD1 mitotic arrest deficient 1-like 1
chr5	140317710	140320210	+	140307538	140320210	A5SS	0.33	50	50	ENSMUST00000198660.5	ENSMUSG00000036639.13	Nudt1	chr5	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 1
chr5	140318228	140320210	+	140307538	140320210	A5SS	0.33	50	50	ENSMUST00000198660.5	ENSMUSG00000036639.13	Nudt1	chr5	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 1
chr5	140317710;140318228	140318178;140320210	+	140317710	140320210	cassetteExon	0.5	100	100	ENSMUST00000071881.10	ENSMUSG00000036639.13	Nudt1	chr5	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 1
chr5	140317741	140318178	+	140317710	140318178	A5SS	0.5	50	50	ENSMUST00000050205.12	ENSMUSG00000036639.13	Nudt1	chr5	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 1
chr5	140317710	140320210	+	140318228	140320210	A5SS&ES	0.5	50	50	ENSMUST00000110827.8	ENSMUSG00000036639.13	Nudt1	chr5	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 1
chr5	140341836	140343812	-	140341910	140343812	A3SS	0.5	50	50	ENSMUST00000197880.5	ENSMUSG00000029560.13	Snx8	chr5	protein_coding	sorting nexin 8
chr5	140346039	140374903	-	140346137	140374903	A3SS	0.5	50	50	ENSMUST00000031539.12	ENSMUSG00000029560.13	Snx8	chr5	protein_coding	sorting nexin 8
chr5	140346137	140352692	-	140346137	140374903	A5SS	0.33	50	50	ENSMUST00000031539.12	ENSMUSG00000029560.13	Snx8	chr5	protein_coding	sorting nexin 8
chr5	140346137	140368444	-	140346137	140374903	A5SS	0.33	50	50	ENSMUST00000031539.12	ENSMUSG00000029560.13	Snx8	chr5	protein_coding	sorting nexin 8
chr5	140346137	140352692	-	140346137	140368444	A5SS	0.33	50	50	ENSMUST00000196566.5	ENSMUSG00000029560.13	Snx8	chr5	protein_coding	sorting nexin 8
chr5	140412900	140415807	+	140412900;140413322	140413165;140415807	ES	0.5	50	50	ENSMUST00000100507.8	ENSMUSG00000056076.14	Eif3b	chr5	protein_coding	eukaryotic translation initiation factor 3, subunit B
chr5	140428191	140428397	+	140428191	140428629	A3SS	0.5	50	50	ENSMUST00000100507.8	ENSMUSG00000056076.14	Eif3b	chr5	protein_coding	eukaryotic translation initiation factor 3, subunit B
chr5	140491482	140509296	+	140491451	140509296	A5SS	0.5	50	50	ENSMUST00000043050.9	ENSMUSG00000036599.11	Chst12	chr5	protein_coding	carbohydrate sulfotransferase 12
chr5	140597287	140597605	+	140593599	140597605	A5SS	0.5	50	50	ENSMUST00000031555.3	ENSMUSG00000029570.6	Lfng	chr5	protein_coding	LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
chr5	140609286;140612281	140612206;140612877	-	140609286	140612877	cassetteExon	0.5	100	100	ENSMUST00000197452.5	ENSMUSG00000036565.8	Ttyh3	chr5	protein_coding	tweety family member 3
chr5	140634370	140634460	-	140621821	140634460	A3SS	0.5	50	50	ENSMUST00000197452.5	ENSMUSG00000036565.8	Ttyh3	chr5	protein_coding	tweety family member 3
chr5	140609286	140610846	-	140609286	140612877	A5SS	0.33	50	50	ENSMUST00000197452.5	ENSMUSG00000036565.8	Ttyh3	chr5	protein_coding	tweety family member 3
chr5	140609286;140610946	140610846;140612206	-	140609286	140612206	cassetteExon	0.5	100	100	ENSMUST00000042661.8	ENSMUSG00000036565.8	Ttyh3	chr5	protein_coding	tweety family member 3
chr5	140660115	140663171	-	140660115;140661003	140660833;140663171	ES	0.5	50	50	ENSMUST00000041783.14	ENSMUSG00000036555.15	Iqce	chr5	protein_coding	IQ motif containing E
chr5	140672155	140675568	-	140672155;140673610	140673540;140675568	ES	0.5	50	50	ENSMUST00000041783.14	ENSMUSG00000036555.15	Iqce	chr5	protein_coding	IQ motif containing E
chr5	140677425	140679170	-	140677425;140678683	140678549;140679170	ES	0.33	50	50	ENSMUST00000041783.14	ENSMUSG00000036555.15	Iqce	chr5	protein_coding	IQ motif containing E
chr5	140651963;140654860	140654777;140656222	-	140651963	140656222	cassetteExon	0.5	100	100	ENSMUST00000041783.14	ENSMUSG00000036555.15	Iqce	chr5	protein_coding	IQ motif containing E
chr5	140651963;140654875	140654777;140656222	-	140651963	140656222	cassetteExon	0.5	100	100	ENSMUST00000041783.14	ENSMUSG00000036555.15	Iqce	chr5	protein_coding	IQ motif containing E
chr5	140666696	140669131	-	140668212	140669131	A3SS&ES	0.5	50	50	ENSMUST00000041783.14	ENSMUSG00000036555.15	Iqce	chr5	protein_coding	IQ motif containing E
chr5	140678679	140679170	-	140678683	140679170	A3SS	0.33	50	50	ENSMUST00000041783.14	ENSMUSG00000036555.15	Iqce	chr5	protein_coding	IQ motif containing E
chr5	140685487	140687697	-	140685487	140687937	A5SS	0.5	50	50	ENSMUST00000041783.14	ENSMUSG00000036555.15	Iqce	chr5	protein_coding	IQ motif containing E
chr5	140677425;140678679	140678549;140679170	-	140677425	140679170	cassetteExon	0.5	100	100	ENSMUST00000136385.8	ENSMUSG00000036555.15	Iqce	chr5	protein_coding	IQ motif containing E
chr5	140654875	140656222	-	140654860	140656222	A3SS	0.33	50	50	ENSMUST00000077890.12	ENSMUSG00000036555.15	Iqce	chr5	protein_coding	IQ motif containing E
chr5	140651963	140656222	-	140651963	140654777	5pMXE	0.5	50	50	ENSMUST00000148788.2	ENSMUSG00000036555.15	Iqce	chr5	protein_coding	IQ motif containing E
chr5	140677425	140679170	-	140677425	140678549	A5SS&ES	0.5	50	50	ENSMUST00000142081.6	ENSMUSG00000036555.15	Iqce	chr5	protein_coding	IQ motif containing E
chr5	140678679	140679170	-	140678679	140679166	A5SS	0.5	50	50	ENSMUST00000142081.6	ENSMUSG00000036555.15	Iqce	chr5	protein_coding	IQ motif containing E
chr5	140677425	140679170	-	140678679	140679170	3pMXE	0.33	50	50	ENSMUST00000135028.5	ENSMUSG00000036555.15	Iqce	chr5	protein_coding	IQ motif containing E
chr5	140698927	140700322	+	140698927;140700139	140700048;140700322	ES	0.5	50	50	ENSMUST00000041588.13	ENSMUSG00000000148.18	Brat1	chr5	protein_coding	BRCA1-associated ATM activator 1
chr5	140690983	140691708	+	140690830	140691708	A5SS	0.5	50	50	ENSMUST00000041588.13	ENSMUSG00000000148.18	Brat1	chr5	protein_coding	BRCA1-associated ATM activator 1
chr5	140698656	140698808	+	140698632	140698808	A5SS	0.5	50	50	ENSMUST00000041588.13	ENSMUSG00000000148.18	Brat1	chr5	protein_coding	BRCA1-associated ATM activator 1
chr5	140710226	140726820	+	140710226	140712999	3pMXE	0.5	50	50	ENSMUST00000126975.8	ENSMUSG00000050022.17	Amz1	chr5	protein_coding	archaelysin family metallopeptidase 1
chr5	140721393	140726820	+	140710226	140726820	A5SS	0.33	50	50	ENSMUST00000060918.11	ENSMUSG00000050022.17	Amz1	chr5	protein_coding	archaelysin family metallopeptidase 1
chr5	140721576	140726820	+	140710226	140726820	A5SS	0.33	50	50	ENSMUST00000060918.11	ENSMUSG00000050022.17	Amz1	chr5	protein_coding	archaelysin family metallopeptidase 1
chr5	140721576	140726820	+	140721393	140726820	A5SS	0.33	50	50	ENSMUST00000120630.3	ENSMUSG00000050022.17	Amz1	chr5	protein_coding	archaelysin family metallopeptidase 1
chr5	140746873	140771152	-	140746873;140748395	140748345;140771152	ES	0.5	50	50	ENSMUST00000000153.9	ENSMUSG00000000149.11	Gna12	chr5	protein_coding	guanine nucleotide binding protein, alpha 12
chr5	141359477	141568048	+	141227847	141568048	A5SS	0.5	50	50	ENSMUST00000085774.11	ENSMUSG00000039683.17	Sdk1	chr5	protein_coding	sidekick cell adhesion molecule 1
chr5	141842796	141921799	+	141778816	141921799	A5SS	0.5	50	50	ENSMUST00000085774.11	ENSMUSG00000039683.17	Sdk1	chr5	protein_coding	sidekick cell adhesion molecule 1
chr5	142387796	142420896	+	142387796	142405234	3pMXE	0.5	50	50	ENSMUST00000198422.2	ENSMUSG00000056493.10	Foxk1	chr5	protein_coding	forkhead box K1
chr5	142449890	142452013	+	142449890	142452023	A3SS	0.5	50	50	ENSMUST00000198967.2	ENSMUSG00000039623.14	Ap5z1	chr5	protein_coding	adaptor-related protein complex 5, zeta 1 subunit
chr5	142452147	142452231	+	142452147	142452245	A3SS	0.5	50	50	ENSMUST00000198967.2	ENSMUSG00000039623.14	Ap5z1	chr5	protein_coding	adaptor-related protein complex 5, zeta 1 subunit
chr5	142456082	142456149	+	142456082	142456138	A3SS	0.5	50	50	ENSMUST00000198135.5	ENSMUSG00000039623.14	Ap5z1	chr5	protein_coding	adaptor-related protein complex 5, zeta 1 subunit
chr5	142459805	142460177	+	142459805	142460129	A3SS	0.5	50	50	ENSMUST00000038699.13	ENSMUSG00000039623.14	Ap5z1	chr5	protein_coding	adaptor-related protein complex 5, zeta 1 subunit
chr5	142472930	142473202	-	142472861	142473202	A3SS	0.5	50	50	ENSMUST00000063635.15	ENSMUSG00000029576.18	Radil	chr5	protein_coding	Ras association and DIL domains
chr5	142494072	142495118	-	142494072	142529160	A5SS	0.33	50	50	ENSMUST00000063635.15	ENSMUSG00000029576.18	Radil	chr5	protein_coding	Ras association and DIL domains
chr5	142494072	142495263	-	142494072	142529160	A5SS	0.33	50	50	ENSMUST00000063635.15	ENSMUSG00000029576.18	Radil	chr5	protein_coding	Ras association and DIL domains
chr5	142529758	142530648	-	142529758	142536735	A5SS	0.33	50	50	ENSMUST00000063635.15	ENSMUSG00000029576.18	Radil	chr5	protein_coding	Ras association and DIL domains
chr5	142529758	142536681	-	142529758	142536735	A5SS	0.33	50	50	ENSMUST00000063635.15	ENSMUSG00000029576.18	Radil	chr5	protein_coding	Ras association and DIL domains
chr5	142529758	142536681	-	142529758	142530648	5pMXE	0.33	50	50	ENSMUST00000085758.10	ENSMUSG00000029576.18	Radil	chr5	protein_coding	Ras association and DIL domains
chr5	142494072	142495118	-	142494072	142495263	A5SS	0.33	50	50	ENSMUST00000110784.8	ENSMUSG00000029576.18	Radil	chr5	protein_coding	Ras association and DIL domains
chr5	142568271	142594313	-	142566017	142594313	A3SS	0.5	50	50	ENSMUST00000037048.9	ENSMUSG00000039533.9	Mmd2	chr5	protein_coding	monocyte to macrophage differentiation-associated 2
chr5	142651946	142652615	+	142652006	142652615	A5SS	0.5	50	50	ENSMUST00000036872.16	ENSMUSG00000029578.16	Wipi2	chr5	protein_coding	WD repeat domain, phosphoinositide interacting 2
chr5	142688046	142691111	+	142678339	142691111	A5SS	0.5	50	50	ENSMUST00000198728.5	ENSMUSG00000050822.12	Slc29a4	chr5	protein_coding	solute carrier family 29 (nucleoside transporters), member 4
chr5	142718304	142719305	-	142718304;142718786	142718619;142719305	ES	0.5	50	50	ENSMUST00000152247.8	ENSMUSG00000039477.17	Tnrc18	chr5	protein_coding	trinucleotide repeat containing 18
chr5	142748916;142750652	142750524;142750806	-	142748916	142750806	cassetteExon	0.5	100	100	ENSMUST00000152247.8	ENSMUSG00000039477.17	Tnrc18	chr5	protein_coding	trinucleotide repeat containing 18
chr5	142759800	142760964	-	142759803	142760964	A3SS	0.5	50	50	ENSMUST00000152247.8	ENSMUSG00000039477.17	Tnrc18	chr5	protein_coding	trinucleotide repeat containing 18
chr5	142718304	142719305	-	142718786	142719305	3pMXE	0.5	50	50	ENSMUST00000196888.2	ENSMUSG00000039477.17	Tnrc18	chr5	protein_coding	trinucleotide repeat containing 18
chr5	142778915	142800770	-	142775944	142800770	A3SS	0.5	50	50	ENSMUST00000151477.8	ENSMUSG00000039477.17	Tnrc18	chr5	protein_coding	trinucleotide repeat containing 18
chr5	142775944	142786058	-	142775944	142800770	A5SS	0.5	50	50	ENSMUST00000151477.8	ENSMUSG00000039477.17	Tnrc18	chr5	protein_coding	trinucleotide repeat containing 18
chr5	142748916	142750806	-	142750652	142750806	3pMXE	0.5	50	50	ENSMUST00000200371.2	ENSMUSG00000039477.17	Tnrc18	chr5	protein_coding	trinucleotide repeat containing 18
chr5	142890537	142891319	-	142890537;142891231	142890992;142891319	ES	0.5	50	50	ENSMUST00000100497.11	ENSMUSG00000029580.15	Actb	chr5	protein_coding	actin, beta
chr5	142890537;142890905	142890843;142890992	-	142890537	142890992	cassetteExon	0.5	100	100	ENSMUST00000100497.11	ENSMUSG00000029580.15	Actb	chr5	protein_coding	actin, beta
chr5	142891447	142891604	-	142891447	142892407	A5SS	0.5	50	50	ENSMUST00000100497.11	ENSMUSG00000029580.15	Actb	chr5	protein_coding	actin, beta
chr5	142890537;142891231	142890843;142891319	-	142890537	142891319	cassetteExon	0.5	100	100	ENSMUST00000167721.8	ENSMUSG00000029580.15	Actb	chr5	protein_coding	actin, beta
chr5	142890537	142891319	-	142891231	142891319	A3SS	0.5	50	50	ENSMUST00000165629.2	ENSMUSG00000029580.15	Actb	chr5	protein_coding	actin, beta
chr5	142948737	142955660	+	142947035	142955660	A5SS	0.25	50	50	ENSMUST00000031565.15	ENSMUSG00000029581.15	Fscn1	chr5	protein_coding	fascin actin-bundling protein 1
chr5	142949065	142955660	+	142947035	142955660	A5SS	0.25	50	50	ENSMUST00000031565.15	ENSMUSG00000029581.15	Fscn1	chr5	protein_coding	fascin actin-bundling protein 1
chr5	142950451	142955660	+	142947035	142955660	A5SS	0.25	50	50	ENSMUST00000031565.15	ENSMUSG00000029581.15	Fscn1	chr5	protein_coding	fascin actin-bundling protein 1
chr5	142949065	142955660	+	142948737	142955660	A5SS	0.25	50	50	ENSMUST00000150622.8	ENSMUSG00000029581.15	Fscn1	chr5	protein_coding	fascin actin-bundling protein 1
chr5	142950451	142955660	+	142948737	142955660	A5SS	0.25	50	50	ENSMUST00000150622.8	ENSMUSG00000029581.15	Fscn1	chr5	protein_coding	fascin actin-bundling protein 1
chr5	142950451	142955660	+	142949065	142955660	A5SS	0.25	50	50	ENSMUST00000137552.8	ENSMUSG00000029581.15	Fscn1	chr5	protein_coding	fascin actin-bundling protein 1
chr5	143076513	143084134	-	143076513;143078880	143078750;143084134	ES	0.25	50	50	ENSMUST00000053498.13	ENSMUSG00000045078.13	Rnf216	chr5	protein_coding	ring finger protein 216
chr5	143076684	143078750	-	143076513	143078750	A3SS	0.33	50	50	ENSMUST00000053498.13	ENSMUSG00000045078.13	Rnf216	chr5	protein_coding	ring finger protein 216
chr5	143076684	143084134	-	143078880	143084134	A3SS&ES	0.25	50	50	ENSMUST00000053498.13	ENSMUSG00000045078.13	Rnf216	chr5	protein_coding	ring finger protein 216
chr5	143084255	143098654	-	143084260	143098654	A3SS	0.5	50	50	ENSMUST00000053498.13	ENSMUSG00000045078.13	Rnf216	chr5	protein_coding	ring finger protein 216
chr5	143076684	143084134	-	143076684;143078880	143078750;143084134	ES	0.25	50	50	ENSMUST00000200607.5	ENSMUSG00000045078.13	Rnf216	chr5	protein_coding	ring finger protein 216
chr5	143076513	143084134	-	143078880	143084134	A3SS&ES	0.25	50	50	ENSMUST00000200607.5	ENSMUSG00000045078.13	Rnf216	chr5	protein_coding	ring finger protein 216
chr5	143073376	143084134	-	143073376;143078880	143078750;143084134	ES	0.25	50	50	ENSMUST00000197296.5	ENSMUSG00000045078.13	Rnf216	chr5	protein_coding	ring finger protein 216
chr5	143076513	143078750	-	143073376	143078750	A3SS	0.33	50	50	ENSMUST00000197296.5	ENSMUSG00000045078.13	Rnf216	chr5	protein_coding	ring finger protein 216
chr5	143076684	143078750	-	143073376	143078750	A3SS	0.33	50	50	ENSMUST00000197296.5	ENSMUSG00000045078.13	Rnf216	chr5	protein_coding	ring finger protein 216
chr5	143073376	143075498	-	143073376	143078750	A5SS	0.33	50	50	ENSMUST00000197296.5	ENSMUSG00000045078.13	Rnf216	chr5	protein_coding	ring finger protein 216
chr5	143076513	143084134	-	143073376	143084134	A3SS	0.25	50	50	ENSMUST00000200430.5	ENSMUSG00000045078.13	Rnf216	chr5	protein_coding	ring finger protein 216
chr5	143076684	143084134	-	143073376	143084134	A3SS	0.25	50	50	ENSMUST00000200430.5	ENSMUSG00000045078.13	Rnf216	chr5	protein_coding	ring finger protein 216
chr5	143073376	143075498	-	143073376	143084134	A5SS	0.33	50	50	ENSMUST00000200430.5	ENSMUSG00000045078.13	Rnf216	chr5	protein_coding	ring finger protein 216
chr5	143076684	143084134	-	143076513	143084134	A3SS	0.25	50	50	ENSMUST00000198179.2	ENSMUSG00000045078.13	Rnf216	chr5	protein_coding	ring finger protein 216
chr5	143130228	143132509	-	143130295	143132509	A3SS	0.33	50	50	ENSMUST00000215102.2	ENSMUSG00000090981.7	Olfr718-ps1	chr5	protein_coding	olfactory receptor 718, pseudogene 1
chr5	143130261	143132509	-	143130295	143132509	A3SS	0.33	50	50	ENSMUST00000215102.2	ENSMUSG00000090981.7	Olfr718-ps1	chr5	protein_coding	olfactory receptor 718, pseudogene 1
chr5	143132626	143133198	-	143132626	143133004	A5SS	0.5	50	50	ENSMUST00000215102.2	ENSMUSG00000090981.7	Olfr718-ps1	chr5	protein_coding	olfactory receptor 718, pseudogene 1
chr5	143130228	143132509	-	143130261	143132509	A3SS	0.33	50	50	ENSMUST00000213631.2	ENSMUSG00000090981.7	Olfr718-ps1	chr5	protein_coding	olfactory receptor 718, pseudogene 1
chr5	143165397	143166304	-	143165297	143166304	A3SS	0.5	50	50	ENSMUST00000049861.11	ENSMUSG00000061898.11	Rbak	chr5	protein_coding	RB-associated KRAB zinc finger
chr5	143182128	143188103	+	143182128;143187941	143187773;143188103	ES	0.5	50	50	ENSMUST00000031574.10	ENSMUSG00000029586.10	Spdye4b	chr5	protein_coding	speedy/RINGO cell cycle regulator family, member E4B
chr5	143167393	143178041	+	143167304	143178041	A5SS	0.5	50	50	ENSMUST00000031574.10	ENSMUSG00000029586.10	Spdye4b	chr5	protein_coding	speedy/RINGO cell cycle regulator family, member E4B
chr5	143180164	143180597	+	143178113	143180597	A5SS	0.5	50	50	ENSMUST00000031574.10	ENSMUSG00000029586.10	Spdye4b	chr5	protein_coding	speedy/RINGO cell cycle regulator family, member E4B
chr5	143204528	143207093	-	143204528;143204886	143204718;143207093	ES	0.5	50	50	ENSMUST00000085733.9	ENSMUSG00000039296.16	Spdye4a	chr5	protein_coding	speedy/RINGO cell cycle regulator family, member E4A
chr5	143210854	143212380	-	143210854	143211349	5pMXE	0.5	50	50	ENSMUST00000085733.9	ENSMUSG00000039296.16	Spdye4a	chr5	protein_coding	speedy/RINGO cell cycle regulator family, member E4A
chr5	143225835;143226170	143226075;143229817	+	143225835	143229817	cassetteExon	0.5	100	100	ENSMUST00000077485.11	ENSMUSG00000029587.17	Zfp12	chr5	protein_coding	zinc finger protein 12
chr5	143225857	143226075	+	143225835	143226075	A5SS	0.33	50	50	ENSMUST00000032591.15	ENSMUSG00000029587.17	Zfp12	chr5	protein_coding	zinc finger protein 12
chr5	143225905	143226075	+	143225835	143226075	A5SS	0.33	50	50	ENSMUST00000032591.15	ENSMUSG00000029587.17	Zfp12	chr5	protein_coding	zinc finger protein 12
chr5	143225835	143229817	+	143226170	143229817	A5SS&ES	0.5	50	50	ENSMUST00000075916.8	ENSMUSG00000029587.17	Zfp12	chr5	protein_coding	zinc finger protein 12
chr5	143225857	143226075	+	143225905	143226075	A5SS	0.33	50	50	ENSMUST00000075916.8	ENSMUSG00000029587.17	Zfp12	chr5	protein_coding	zinc finger protein 12
chr5	143278104	143278608	-	143278099	143278608	A3SS	0.5	50	50	ENSMUST00000212355.2	ENSMUSG00000093910.3	Zfp853	chr5	protein_coding	zinc finger protein 853
chr5	143293895;143297631	143297466;143299933	-	143293895	143299933	cassetteExon	0.5	100	100	ENSMUST00000159406.8	ENSMUSG00000039244.11	E130309D02Rik	chr5	protein_coding	RIKEN cDNA E130309D02 gene
chr5	143294175	143297466	-	143293895	143297466	A3SS	0.5	50	50	ENSMUST00000046418.3	ENSMUSG00000039244.11	E130309D02Rik	chr5	protein_coding	RIKEN cDNA E130309D02 gene
chr5	143293895	143299933	-	143293895	143297466	A5SS	0.5	50	50	ENSMUST00000160498.2	ENSMUSG00000039244.11	E130309D02Rik	chr5	protein_coding	RIKEN cDNA E130309D02 gene
chr5	143314325;143314652	143314433;143314921	-	143314325	143314921	cassetteExon	0.5	100	100	ENSMUST00000001900.9	ENSMUSG00000001844.11	Zdhhc4	chr5	protein_coding	zinc finger, DHHC domain containing 4
chr5	143310153	143310640	-	143310065	143310640	A3SS	0.5	50	50	ENSMUST00000001900.9	ENSMUSG00000001844.11	Zdhhc4	chr5	protein_coding	zinc finger, DHHC domain containing 4
chr5	143312060	143314146	-	143311978	143314146	A3SS	0.5	50	50	ENSMUST00000001900.9	ENSMUSG00000001844.11	Zdhhc4	chr5	protein_coding	zinc finger, DHHC domain containing 4
chr5	143306230	143307510	-	143306230	143307524	A5SS	0.5	50	50	ENSMUST00000001900.9	ENSMUSG00000001844.11	Zdhhc4	chr5	protein_coding	zinc finger, DHHC domain containing 4
chr5	143310713	143311088	-	143310713	143311854	A5SS	0.5	50	50	ENSMUST00000001900.9	ENSMUSG00000001844.11	Zdhhc4	chr5	protein_coding	zinc finger, DHHC domain containing 4
chr5	143314325	143314854	-	143314325	143314921	A5SS	0.33	50	50	ENSMUST00000001900.9	ENSMUSG00000001844.11	Zdhhc4	chr5	protein_coding	zinc finger, DHHC domain containing 4
chr5	143314325	143314433	-	143314325	143314854	A5SS	0.33	50	50	ENSMUST00000159941.8	ENSMUSG00000001844.11	Zdhhc4	chr5	protein_coding	zinc finger, DHHC domain containing 4
chr5	143314325	143314921	-	143314325	143314433	A5SS	0.33	50	50	ENSMUST00000162941.8	ENSMUSG00000001844.11	Zdhhc4	chr5	protein_coding	zinc finger, DHHC domain containing 4
chr5	143315108;143316640	143316459;143318066	+	143315108	143318066	cassetteExon	0.5	100	100	ENSMUST00000160231.2	ENSMUSG00000089889.3	0610040B10Rik	chr5	lncRNA	RIKEN cDNA 0610040B10 gene
chr5	143349730	143358749	+	143348461	143358749	A5SS	0.33	50	50	ENSMUST00000110733.9	ENSMUSG00000010825.18	Grid2ip	chr5	protein_coding	glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein 1
chr5	143355966	143358749	+	143348461	143358749	A5SS	0.33	50	50	ENSMUST00000110733.9	ENSMUSG00000010825.18	Grid2ip	chr5	protein_coding	glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein 1
chr5	143355966	143358749	+	143349730	143358749	A5SS	0.33	50	50	ENSMUST00000010969.15	ENSMUSG00000010825.18	Grid2ip	chr5	protein_coding	glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein 1
chr5	143493913;143495408	143495352;143500424	-	143493913	143500424	cassetteExon	0.5	100	100	ENSMUST00000080537.14	ENSMUSG00000001847.15	Rac1	chr5	protein_coding	Rac family small GTPase 1
chr5	143502984	143503210	-	143502984	143513518	A5SS	0.33	50	50	ENSMUST00000080537.14	ENSMUSG00000001847.15	Rac1	chr5	protein_coding	Rac family small GTPase 1
chr5	143502984	143503812	-	143502984	143513518	A5SS	0.33	50	50	ENSMUST00000080537.14	ENSMUSG00000001847.15	Rac1	chr5	protein_coding	Rac family small GTPase 1
chr5	143502984	143503210	-	143502984	143503812	A5SS	0.33	50	50	ENSMUST00000145709.8	ENSMUSG00000001847.15	Rac1	chr5	protein_coding	Rac family small GTPase 1
chr5	143534889	143548512	+	143534889;143537296	143537164;143548512	ES	0.5	50	50	ENSMUST00000169329.8	ENSMUSG00000118332.2	Fam220a	chr5	protein_coding	family with sequence similarity 220, member A
chr5	143534889	143537297	+	143534889	143548512	A3SS	0.33	50	50	ENSMUST00000067145.12	ENSMUSG00000118332.2	Fam220a	chr5	protein_coding	family with sequence similarity 220, member A
chr5	143534889	143548512	+	143534889	143537164	3pMXE	0.33	50	50	ENSMUST00000118121.2	ENSMUSG00000118332.2	Fam220a	chr5	protein_coding	family with sequence similarity 220, member A
chr5	143534889	143537297	+	143534889	143537164	A3SS	0.33	50	50	ENSMUST00000118121.2	ENSMUSG00000118332.2	Fam220a	chr5	protein_coding	family with sequence similarity 220, member A
chr5	143608428;143636364	143636282;143670151	+	143608428	143670151	cassetteExon	0.5	100	100	ENSMUST00000116456.10	ENSMUSG00000018001.19	Cyth3	chr5	protein_coding	cytohesin 3
chr5	143619928	143670151	+	143608428	143670151	A5SS	0.2	50	50	ENSMUST00000116456.10	ENSMUSG00000018001.19	Cyth3	chr5	protein_coding	cytohesin 3
chr5	143622307	143670151	+	143608428	143670151	A5SS	0.2	50	50	ENSMUST00000116456.10	ENSMUSG00000018001.19	Cyth3	chr5	protein_coding	cytohesin 3
chr5	143637546	143670151	+	143608428	143670151	A5SS	0.2	50	50	ENSMUST00000116456.10	ENSMUSG00000018001.19	Cyth3	chr5	protein_coding	cytohesin 3
chr5	143619928	143670151	+	143636364	143670151	A5SS&ES	0.2	50	50	ENSMUST00000177196.8	ENSMUSG00000018001.19	Cyth3	chr5	protein_coding	cytohesin 3
chr5	143622307	143670151	+	143636364	143670151	A5SS&ES	0.2	50	50	ENSMUST00000177196.8	ENSMUSG00000018001.19	Cyth3	chr5	protein_coding	cytohesin 3
chr5	143637546	143670151	+	143636364	143670151	A5SS	0.2	50	50	ENSMUST00000177196.8	ENSMUSG00000018001.19	Cyth3	chr5	protein_coding	cytohesin 3
chr5	143622307	143670151	+	143619928	143670151	A5SS	0.2	50	50	ENSMUST00000131436.8	ENSMUSG00000018001.19	Cyth3	chr5	protein_coding	cytohesin 3
chr5	143637546	143670151	+	143619928	143670151	A5SS	0.2	50	50	ENSMUST00000131436.8	ENSMUSG00000018001.19	Cyth3	chr5	protein_coding	cytohesin 3
chr5	143637546	143670151	+	143622307	143670151	A5SS	0.2	50	50	ENSMUST00000177281.8	ENSMUSG00000018001.19	Cyth3	chr5	protein_coding	cytohesin 3
chr5	143745907	143749429	+	143744544	143749429	A5SS	0.5	50	50	ENSMUST00000180951.3	ENSMUSG00000097287.4	D130017N08Rik	chr5	lncRNA	RIKEN cDNA D130017N08 gene
chr5	143750243	143752766	+	143749527	143752766	A5SS	0.5	50	50	ENSMUST00000180460.2	ENSMUSG00000097287.4	D130017N08Rik	chr5	lncRNA	RIKEN cDNA D130017N08 gene
chr5	143830451	143833823	-	143830451	143831331	5pMXE	0.33	50	50	ENSMUST00000079624.12	ENSMUSG00000029607.15	Ankrd61	chr5	protein_coding	ankyrin repeat domain 61
chr5	143830451	143831590	-	143830451	143831331	A5SS	0.33	50	50	ENSMUST00000079624.12	ENSMUSG00000029607.15	Ankrd61	chr5	protein_coding	ankyrin repeat domain 61
chr5	143830451	143833823	-	143830451	143831590	5pMXE	0.33	50	50	ENSMUST00000110717.9	ENSMUSG00000029607.15	Ankrd61	chr5	protein_coding	ankyrin repeat domain 61
chr5	143843573	143846519	-	143843573	143846399	A5SS	0.5	50	50	ENSMUST00000031613.11	ENSMUSG00000029610.14	Aimp2	chr5	protein_coding	aminoacyl tRNA synthetase complex-interacting multifunctional protein 2
chr5	143846897	143850220	+	143846897;143848878	143848739;143850220	ES	0.33	50	50	ENSMUST00000148011.8	ENSMUSG00000079109.12	Pms2	chr5	protein_coding	PMS1 homolog2, mismatch repair system component
chr5	143862891	143865760	+	143862891;143865084	143864917;143865760	ES	0.33	50	50	ENSMUST00000148011.8	ENSMUSG00000079109.12	Pms2	chr5	protein_coding	PMS1 homolog2, mismatch repair system component
chr5	143866168	143873803	+	143866168	143867834	3pMXE	0.5	50	50	ENSMUST00000148011.8	ENSMUSG00000079109.12	Pms2	chr5	protein_coding	PMS1 homolog2, mismatch repair system component
chr5	143846897	143848744	+	143846897	143848739	A3SS	0.33	50	50	ENSMUST00000148011.8	ENSMUSG00000079109.12	Pms2	chr5	protein_coding	PMS1 homolog2, mismatch repair system component
chr5	143856426	143858843	+	143856426	143858834	A3SS	0.5	50	50	ENSMUST00000148011.8	ENSMUSG00000079109.12	Pms2	chr5	protein_coding	PMS1 homolog2, mismatch repair system component
chr5	143846892	143850220	+	143848878	143850220	A5SS&ES	0.33	50	50	ENSMUST00000148011.8	ENSMUSG00000079109.12	Pms2	chr5	protein_coding	PMS1 homolog2, mismatch repair system component
chr5	143862319	143864917	+	143862891	143864917	A5SS	0.33	50	50	ENSMUST00000148011.8	ENSMUSG00000079109.12	Pms2	chr5	protein_coding	PMS1 homolog2, mismatch repair system component
chr5	143865115	143865760	+	143865084	143865760	A5SS	0.33	50	50	ENSMUST00000148011.8	ENSMUSG00000079109.12	Pms2	chr5	protein_coding	PMS1 homolog2, mismatch repair system component
chr5	143846897	143850220	+	143846897;143848878	143848744;143850220	ES	0.33	50	50	ENSMUST00000170083.8	ENSMUSG00000079109.12	Pms2	chr5	protein_coding	PMS1 homolog2, mismatch repair system component
chr5	143862891	143865760	+	143862891	143864917	A3SS	0.5	50	50	ENSMUST00000141942.8	ENSMUSG00000079109.12	Pms2	chr5	protein_coding	PMS1 homolog2, mismatch repair system component
chr5	143862891	143865760	+	143865084	143865760	A5SS&ES	0.33	50	50	ENSMUST00000110710.10	ENSMUSG00000079109.12	Pms2	chr5	protein_coding	PMS1 homolog2, mismatch repair system component
chr5	143854495;143865084	143864917;143865760	+	143854495;143862891	143856327;143865760	MXE	0.5	100	100	ENSMUST00000110707.8	ENSMUSG00000079109.12	Pms2	chr5	protein_coding	PMS1 homolog2, mismatch repair system component
chr5	143854495;143865115	143864917;143865760	+	143854495;143862891	143856327;143865760	MXE	0.5	100	100	ENSMUST00000110707.8	ENSMUSG00000079109.12	Pms2	chr5	protein_coding	PMS1 homolog2, mismatch repair system component
chr5	143862891;143865115	143864917;143865760	+	143862891	143865760	cassetteExon	0.5	100	100	ENSMUST00000110707.8	ENSMUSG00000079109.12	Pms2	chr5	protein_coding	PMS1 homolog2, mismatch repair system component
chr5	143846892	143850220	+	143846897	143850220	A5SS	0.33	50	50	ENSMUST00000147910.8	ENSMUSG00000079109.12	Pms2	chr5	protein_coding	PMS1 homolog2, mismatch repair system component
chr5	143854495	143856327	+	143854495	143864917	A3SS	0.5	50	50	ENSMUST00000110709.7	ENSMUSG00000079109.12	Pms2	chr5	protein_coding	PMS1 homolog2, mismatch repair system component
chr5	143862319	143864917	+	143854495	143864917	A5SS	0.33	50	50	ENSMUST00000110709.7	ENSMUSG00000079109.12	Pms2	chr5	protein_coding	PMS1 homolog2, mismatch repair system component
chr5	143862891	143864917	+	143854495	143864917	A5SS	0.33	50	50	ENSMUST00000110709.7	ENSMUSG00000079109.12	Pms2	chr5	protein_coding	PMS1 homolog2, mismatch repair system component
chr5	143862891	143865760	+	143865115	143865760	5pMXE	0.33	50	50	ENSMUST00000172367.3	ENSMUSG00000104633.2	Gm42421	chr5	protein_coding	predicted gene, 42421
chr5	143869937	143873803	+	143866168	143873803	A5SS	0.5	50	50	ENSMUST00000172367.3	ENSMUSG00000104633.2	Gm42421	chr5	protein_coding	predicted gene, 42421
chr5	143881459	143883759	+	143881459	143883088	3pMXE	0.5	50	50	ENSMUST00000031618.6	ENSMUSG00000075569.11	Rsph10b	chr5	protein_coding	radial spoke head 10 homolog B (Chlamydomonas)
chr5	143916766	143920722	+	143916766;143919379	143919377;143920722	ES	0.33	50	50	ENSMUST00000166847.8	ENSMUSG00000075569.11	Rsph10b	chr5	protein_coding	radial spoke head 10 homolog B (Chlamydomonas)
chr5	143918033	143920722	+	143919379	143920722	A5SS&ES	0.33	50	50	ENSMUST00000166847.8	ENSMUSG00000075569.11	Rsph10b	chr5	protein_coding	radial spoke head 10 homolog B (Chlamydomonas)
chr5	143918033	143920722	+	143916766	143920722	A5SS	0.33	50	50	ENSMUST00000212711.2	ENSMUSG00000075569.11	Rsph10b	chr5	protein_coding	radial spoke head 10 homolog B (Chlamydomonas)
chr5	143928448	143929197	-	143928448	143929327	A5SS	0.5	50	50	ENSMUST00000031621.11	ENSMUSG00000029617.11	Ccz1	chr5	protein_coding	CCZ1 vacuolar protein trafficking and biogenesis associated
chr5	143962531	143963365	-	143962527	143963365	A3SS	0.5	50	50	ENSMUST00000031622.13	ENSMUSG00000029618.14	Ocm	chr5	protein_coding	oncomodulin
chr5	144144367;144144621	144144525;144145413	-	144144367	144145413	cassetteExon	0.5	100	100	ENSMUST00000085701.7	ENSMUSG00000066621.13	Tecpr1	chr5	protein_coding	tectonin beta-propeller repeat containing 1
chr5	144133276	144134423	-	144133276	144134710	A5SS	0.5	50	50	ENSMUST00000085701.7	ENSMUSG00000066621.13	Tecpr1	chr5	protein_coding	tectonin beta-propeller repeat containing 1
chr5	144151237	144152556	-	144151237	144153071	A5SS	0.5	50	50	ENSMUST00000085701.7	ENSMUSG00000066621.13	Tecpr1	chr5	protein_coding	tectonin beta-propeller repeat containing 1
chr5	144178900	144192889	-	144178900	144181243	5pMXE	0.5	50	50	ENSMUST00000124015.2	ENSMUSG00000087484.2	2900089D17Rik	chr5	lncRNA	RIKEN cDNA 2900089D17 gene
chr5	144192722	144241830	+	144192722	144200819	3pMXE	0.5	50	50	ENSMUST00000110695.8	ENSMUSG00000047843.17	Bri3	chr5	protein_coding	brain protein I3
chr5	144192329	144192620	+	144181425	144192620	A5SS	0.5	50	50	ENSMUST00000110695.8	ENSMUSG00000047843.17	Bri3	chr5	protein_coding	brain protein I3
chr5	144223121	144225599	-	144223121	144255739	A5SS	0.5	50	50	ENSMUST00000055190.8	ENSMUSG00000038859.8	Baiap2l1	chr5	protein_coding	BAI1-associated protein 2-like 1
chr5	144295360	144297263	+	144294854	144297263	A5SS	0.33	50	50	ENSMUST00000197311.2	ENSMUSG00000104600.5	Dmrt1i	chr5	lncRNA	Dmrt1 interacting ncRNA
chr5	144295436	144297263	+	144294854	144297263	A5SS	0.33	50	50	ENSMUST00000197311.2	ENSMUSG00000104600.5	Dmrt1i	chr5	lncRNA	Dmrt1 interacting ncRNA
chr5	144295360	144297263	+	144295436	144297263	A5SS	0.33	50	50	ENSMUST00000196478.5	ENSMUSG00000104600.5	Dmrt1i	chr5	lncRNA	Dmrt1 interacting ncRNA
chr5	144692326	144698531	-	144692326	144698267	5pMXE	0.5	50	50	ENSMUST00000061446.8	ENSMUSG00000043388.9	Tmem130	chr5	protein_coding	transmembrane protein 130
chr5	144705531	144707899	+	144705055	144707899	A5SS	0.33	50	50	ENSMUST00000136379.2	ENSMUSG00000045482.17	Trrap	chr5	protein_coding	transformation/transcription domain-associated protein
chr5	144705657	144707899	+	144705055	144707899	A5SS	0.33	50	50	ENSMUST00000136379.2	ENSMUSG00000045482.17	Trrap	chr5	protein_coding	transformation/transcription domain-associated protein
chr5	144705657	144707899	+	144705531	144707899	A5SS	0.33	50	50	ENSMUST00000128550.8	ENSMUSG00000045482.17	Trrap	chr5	protein_coding	transformation/transcription domain-associated protein
chr5	144744201;144747014	144746961;144748705	+	144744201	144748705	cassetteExon	0.5	100	100	ENSMUST00000100467.10	ENSMUSG00000045482.17	Trrap	chr5	protein_coding	transformation/transcription domain-associated protein
chr5	144744201;144747162	144746961;144748705	+	144744201	144748705	cassetteExon	0.5	100	100	ENSMUST00000100467.10	ENSMUSG00000045482.17	Trrap	chr5	protein_coding	transformation/transcription domain-associated protein
chr5	144727997	144728081	+	144727997	144728084	A3SS	0.5	50	50	ENSMUST00000100467.10	ENSMUSG00000045482.17	Trrap	chr5	protein_coding	transformation/transcription domain-associated protein
chr5	144781099	144782279	+	144781099	144782225	A3SS	0.5	50	50	ENSMUST00000100467.10	ENSMUSG00000045482.17	Trrap	chr5	protein_coding	transformation/transcription domain-associated protein
chr5	144776439	144777148	+	144776406	144777148	A5SS	0.5	50	50	ENSMUST00000100467.10	ENSMUSG00000045482.17	Trrap	chr5	protein_coding	transformation/transcription domain-associated protein
chr5	144794108	144794195	+	144793900	144794195	A5SS	0.5	50	50	ENSMUST00000100467.10	ENSMUSG00000045482.17	Trrap	chr5	protein_coding	transformation/transcription domain-associated protein
chr5	144747014;144747162	144747142;144748705	+	144747014	144748705	cassetteExon	0.5	100	100	ENSMUST00000094120.9	ENSMUSG00000045482.17	Trrap	chr5	protein_coding	transformation/transcription domain-associated protein
chr5	144830117	144831284	-	144830117;144830967	144830890;144831284	ES	0.33	50	50	ENSMUST00000110677.8	ENSMUSG00000038780.15	Smurf1	chr5	protein_coding	SMAD specific E3 ubiquitin protein ligase 1
chr5	144817510	144818428	-	144817519	144818428	A3SS	0.5	50	50	ENSMUST00000110677.8	ENSMUSG00000038780.15	Smurf1	chr5	protein_coding	SMAD specific E3 ubiquitin protein ligase 1
chr5	144828323	144831284	-	144828323;144830117	144829971;144831284	ES	0.33	50	50	ENSMUST00000085684.11	ENSMUSG00000038780.15	Smurf1	chr5	protein_coding	SMAD specific E3 ubiquitin protein ligase 1
chr5	144830967	144831284	-	144828323	144831284	A3SS	0.33	50	50	ENSMUST00000198621.2	ENSMUSG00000038780.15	Smurf1	chr5	protein_coding	SMAD specific E3 ubiquitin protein ligase 1
chr5	144938034	144941742	-	144938034;144939218	144939156;144941742	ES	0.5	50	50	ENSMUST00000110673.8	ENSMUSG00000038770.18	Kpna7	chr5	protein_coding	karyopherin alpha 7 (importin alpha 8)
chr5	144946208	144947610	-	144946208	144947412	5pMXE	0.33	50	50	ENSMUST00000110673.8	ENSMUSG00000038770.18	Kpna7	chr5	protein_coding	karyopherin alpha 7 (importin alpha 8)
chr5	144938034	144941382	-	144938034	144939156	A5SS&ES	0.33	50	50	ENSMUST00000110673.8	ENSMUSG00000038770.18	Kpna7	chr5	protein_coding	karyopherin alpha 7 (importin alpha 8)
chr5	144942789	144944075	-	144942789	144944009	A5SS	0.5	50	50	ENSMUST00000110673.8	ENSMUSG00000038770.18	Kpna7	chr5	protein_coding	karyopherin alpha 7 (importin alpha 8)
chr5	144946208	144946322	-	144946208	144947412	A5SS	0.33	50	50	ENSMUST00000110673.8	ENSMUSG00000038770.18	Kpna7	chr5	protein_coding	karyopherin alpha 7 (importin alpha 8)
chr5	144946208	144947610	-	144946208	144946322	5pMXE	0.33	50	50	ENSMUST00000110672.8	ENSMUSG00000038770.18	Kpna7	chr5	protein_coding	karyopherin alpha 7 (importin alpha 8)
chr5	144938034	144941382	-	144938034	144941742	A5SS	0.33	50	50	ENSMUST00000110672.8	ENSMUSG00000038770.18	Kpna7	chr5	protein_coding	karyopherin alpha 7 (importin alpha 8)
chr5	145020782	145029268	+	145020782;145028056	145027963;145029268	ES	0.5	50	50	ENSMUST00000031625.15	ENSMUSG00000029621.15	Arpc1a	chr5	protein_coding	actin related protein 2/3 complex, subunit 1A
chr5	145038079;145039182	145039049;145041252	+	145038079	145041252	cassetteExon	0.5	100	100	ENSMUST00000031625.15	ENSMUSG00000029621.15	Arpc1a	chr5	protein_coding	actin related protein 2/3 complex, subunit 1A
chr5	145034133	145035440	+	145034133	145037867	A3SS	0.5	50	50	ENSMUST00000031625.15	ENSMUSG00000029621.15	Arpc1a	chr5	protein_coding	actin related protein 2/3 complex, subunit 1A
chr5	145021062	145027963	+	145020782	145027963	A5SS	0.5	50	50	ENSMUST00000031625.15	ENSMUSG00000029621.15	Arpc1a	chr5	protein_coding	actin related protein 2/3 complex, subunit 1A
chr5	145064536	145067257	+	145064536	145064631	3pMXE	0.5	50	50	ENSMUST00000085679.13	ENSMUSG00000029622.17	Arpc1b	chr5	protein_coding	actin related protein 2/3 complex, subunit 1B
chr5	145062594	145062689	+	145062594	145062701	A3SS	0.5	50	50	ENSMUST00000085679.13	ENSMUSG00000029622.17	Arpc1b	chr5	protein_coding	actin related protein 2/3 complex, subunit 1B
chr5	145051233	145058467	+	145051151	145058467	A5SS	0.5	50	50	ENSMUST00000085679.13	ENSMUSG00000029622.17	Arpc1b	chr5	protein_coding	actin related protein 2/3 complex, subunit 1B
chr5	145060733	145061397	+	145060601	145061397	A5SS	0.33	50	50	ENSMUST00000085679.13	ENSMUSG00000029622.17	Arpc1b	chr5	protein_coding	actin related protein 2/3 complex, subunit 1B
chr5	145061100	145061397	+	145060601	145061397	A5SS	0.33	50	50	ENSMUST00000085679.13	ENSMUSG00000029622.17	Arpc1b	chr5	protein_coding	actin related protein 2/3 complex, subunit 1B
chr5	145061100	145061397	+	145060733	145061397	A5SS	0.33	50	50	ENSMUST00000136074.2	ENSMUSG00000029622.17	Arpc1b	chr5	protein_coding	actin related protein 2/3 complex, subunit 1B
chr5	145071982	145073164	-	145071982	145073712	A5SS	0.5	50	50	ENSMUST00000031627.9	ENSMUSG00000029623.15	Pdap1	chr5	protein_coding	PDGFA associated protein 1
chr5	145079377	145083253	+	145079377;145081831	145081709;145083253	ES	0.5	50	50	ENSMUST00000162594.8	ENSMUSG00000038722.18	Bud31	chr5	protein_coding	BUD31 homolog
chr5	145077373	145078115	+	145077252	145078115	A5SS	0.5	50	50	ENSMUST00000162594.8	ENSMUSG00000038722.18	Bud31	chr5	protein_coding	BUD31 homolog
chr5	145078170	145079258	+	145078246	145079258	A5SS	0.5	50	50	ENSMUST00000162594.8	ENSMUSG00000038722.18	Bud31	chr5	protein_coding	BUD31 homolog
chr5	145079377	145083253	+	145079377	145081709	3pMXE	0.5	50	50	ENSMUST00000161974.2	ENSMUSG00000038722.18	Bud31	chr5	protein_coding	BUD31 homolog
chr5	145079377	145083253	+	145081831	145083253	5pMXE	0.5	50	50	ENSMUST00000160840.2	ENSMUSG00000038722.18	Bud31	chr5	protein_coding	BUD31 homolog
chr5	145102343	145103580	-	145102343	145103764	A5SS	0.5	50	50	ENSMUST00000031628.10	ENSMUSG00000029624.11	Ptcd1	chr5	protein_coding	pentatricopeptide repeat domain 1
chr5	145110269	145112921	+	145110269;145112462	145112367;145112921	ES	0.5	50	50	ENSMUST00000160629.8	ENSMUSG00000029625.17	Cpsf4	chr5	protein_coding	cleavage and polyadenylation specific factor 4
chr5	145114112	145115568	+	145114112	145115646	A3SS	0.25	50	50	ENSMUST00000160629.8	ENSMUSG00000029625.17	Cpsf4	chr5	protein_coding	cleavage and polyadenylation specific factor 4
chr5	145114112	145115594	+	145114112	145115646	A3SS	0.25	50	50	ENSMUST00000160629.8	ENSMUSG00000029625.17	Cpsf4	chr5	protein_coding	cleavage and polyadenylation specific factor 4
chr5	145114112	145115643	+	145114112	145115646	A3SS	0.25	50	50	ENSMUST00000160629.8	ENSMUSG00000029625.17	Cpsf4	chr5	protein_coding	cleavage and polyadenylation specific factor 4
chr5	145107727	145110117	+	145107375	145110117	A5SS	0.5	50	50	ENSMUST00000160629.8	ENSMUSG00000029625.17	Cpsf4	chr5	protein_coding	cleavage and polyadenylation specific factor 4
chr5	145114112	145115594	+	145114112	145115568	A3SS	0.25	50	50	ENSMUST00000160422.8	ENSMUSG00000029625.17	Cpsf4	chr5	protein_coding	cleavage and polyadenylation specific factor 4
chr5	145114112	145115643	+	145114112	145115568	A3SS	0.25	50	50	ENSMUST00000160422.8	ENSMUSG00000029625.17	Cpsf4	chr5	protein_coding	cleavage and polyadenylation specific factor 4
chr5	145114112	145115594	+	145114112	145115643	A3SS	0.25	50	50	ENSMUST00000162244.8	ENSMUSG00000029625.17	Cpsf4	chr5	protein_coding	cleavage and polyadenylation specific factor 4
chr5	145124043;145125068	145125003;145128313	-	145124043	145128313	cassetteExon	0.5	100	100	ENSMUST00000161741.8	ENSMUSG00000038690.16	Atp5j2	chr5	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2
chr5	145124043;145125132	145125003;145128313	-	145124043	145128313	cassetteExon	0.5	100	100	ENSMUST00000161741.8	ENSMUSG00000038690.16	Atp5j2	chr5	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2
chr5	145125068	145128313	-	145125132	145128313	A3SS	0.33	50	50	ENSMUST00000162360.8	ENSMUSG00000038690.16	Atp5j2	chr5	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2
chr5	145135610	145138553	-	145135610	145138090	A5SS	0.5	50	50	ENSMUST00000031632.9	ENSMUSG00000029627.13	Zkscan14	chr5	protein_coding	zinc finger with KRAB and SCAN domains 14
chr5	145144518;145148107	145147966;145148556	+	145144518	145148556	cassetteExon	0.5	100	100	ENSMUST00000085671.10	ENSMUSG00000055991.16	Zkscan5	chr5	protein_coding	zinc finger with KRAB and SCAN domains 5
chr5	145142518	145144373	+	145142518	145144386	A3SS	0.5	50	50	ENSMUST00000085671.10	ENSMUSG00000055991.16	Zkscan5	chr5	protein_coding	zinc finger with KRAB and SCAN domains 5
chr5	145148638	145149299	+	145148638	145149315	A3SS	0.5	50	50	ENSMUST00000085671.10	ENSMUSG00000055991.16	Zkscan5	chr5	protein_coding	zinc finger with KRAB and SCAN domains 5
chr5	145145526	145148556	+	145144518	145148556	A5SS	0.33	50	50	ENSMUST00000085671.10	ENSMUSG00000055991.16	Zkscan5	chr5	protein_coding	zinc finger with KRAB and SCAN domains 5
chr5	145149405	145155097	+	145149450	145155097	A5SS	0.33	50	50	ENSMUST00000085671.10	ENSMUSG00000055991.16	Zkscan5	chr5	protein_coding	zinc finger with KRAB and SCAN domains 5
chr5	145144518	145147966	+	145144518	145155097	A3SS	0.33	50	50	ENSMUST00000031601.8	ENSMUSG00000055991.16	Zkscan5	chr5	protein_coding	zinc finger with KRAB and SCAN domains 5
chr5	145144518	145148556	+	145144518	145155097	A3SS	0.33	50	50	ENSMUST00000031601.8	ENSMUSG00000055991.16	Zkscan5	chr5	protein_coding	zinc finger with KRAB and SCAN domains 5
chr5	145149405	145155097	+	145144518	145155097	A5SS	0.33	50	50	ENSMUST00000031601.8	ENSMUSG00000055991.16	Zkscan5	chr5	protein_coding	zinc finger with KRAB and SCAN domains 5
chr5	145149450	145155097	+	145144518	145155097	A5SS	0.33	50	50	ENSMUST00000031601.8	ENSMUSG00000055991.16	Zkscan5	chr5	protein_coding	zinc finger with KRAB and SCAN domains 5
chr5	145145526	145148556	+	145148107	145148556	A5SS&ES	0.33	50	50	ENSMUST00000162168.8	ENSMUSG00000055991.16	Zkscan5	chr5	protein_coding	zinc finger with KRAB and SCAN domains 5
chr5	145170412	145172547	+	145170412;145172201	145172116;145172547	ES	0.5	50	50	ENSMUST00000200039.5	ENSMUSG00000007812.17	Zfp655	chr5	protein_coding	zinc finger protein 655
chr5	145172201	145173860	+	145172201;145172673	145172547;145173860	ES	0.33	50	50	ENSMUST00000200039.5	ENSMUSG00000007812.17	Zfp655	chr5	protein_coding	zinc finger protein 655
chr5	145170412;145172201	145172116;145179730	+	145170412	145179730	cassetteExon	0.5	100	100	ENSMUST00000167316.8	ENSMUSG00000007812.17	Zfp655	chr5	protein_coding	zinc finger protein 655
chr5	145170412	145172547	+	145170412	145179730	A3SS	0.25	50	50	ENSMUST00000167316.8	ENSMUSG00000007812.17	Zfp655	chr5	protein_coding	zinc finger protein 655
chr5	145170412	145173860	+	145170412	145179730	A3SS	0.25	50	50	ENSMUST00000167316.8	ENSMUSG00000007812.17	Zfp655	chr5	protein_coding	zinc finger protein 655
chr5	145170412	145173860	+	145170412;145172201	145172116;145173860	ES	0.33	50	50	ENSMUST00000196069.5	ENSMUSG00000007812.17	Zfp655	chr5	protein_coding	zinc finger protein 655
chr5	145172201	145179730	+	145172201	145173860	3pMXE	0.33	50	50	ENSMUST00000196069.5	ENSMUSG00000007812.17	Zfp655	chr5	protein_coding	zinc finger protein 655
chr5	145170412;145172673	145172547;145173860	+	145170412;145172201	145172116;145173860	MXE	0.5	100	100	ENSMUST00000196069.5	ENSMUSG00000007812.17	Zfp655	chr5	protein_coding	zinc finger protein 655
chr5	145170412	145172547	+	145170412	145172116	A3SS&ES	0.25	50	50	ENSMUST00000199322.5	ENSMUSG00000007812.17	Zfp655	chr5	protein_coding	zinc finger protein 655
chr5	145170412	145173860	+	145170412	145172116	A3SS&ES	0.25	50	50	ENSMUST00000199322.5	ENSMUSG00000007812.17	Zfp655	chr5	protein_coding	zinc finger protein 655
chr5	145172201	145172547	+	145172201	145179730	A3SS	0.33	50	50	ENSMUST00000199322.5	ENSMUSG00000007812.17	Zfp655	chr5	protein_coding	zinc finger protein 655
chr5	145170412;145172673	145172547;145173860	+	145170412	145173860	cassetteExon	0.5	100	100	ENSMUST00000199003.5	ENSMUSG00000007812.17	Zfp655	chr5	protein_coding	zinc finger protein 655
chr5	145220594	145223118	+	145220590	145223118	A5SS	0.5	50	50	ENSMUST00000200246.2	ENSMUSG00000070420.5	Zscan25	chr5	protein_coding	zinc finger and SCAN domain containing 25
chr5	145305949;145307532	145307444;145307767	+	145305949	145307767	cassetteExon	0.5	100	100	ENSMUST00000174696.8	ENSMUSG00000070419.12	Cyp3a57	chr5	protein_coding	cytochrome P450, family 3, subfamily a, polypeptide 57
chr5	145929846;145930171	145930083;145931675	-	145929846	145931675	cassetteExon	0.5	100	100	ENSMUST00000145062.8	ENSMUSG00000029630.16	Cyp3a25	chr5	protein_coding	cytochrome P450, family 3, subfamily a, polypeptide 25
chr5	145931788	145935297	-	145914512	145935297	A3SS	0.5	50	50	ENSMUST00000138870.2	ENSMUSG00000029630.16	Cyp3a25	chr5	protein_coding	cytochrome P450, family 3, subfamily a, polypeptide 25
chr5	145914512	145918194	-	145914512	145935297	A5SS	0.5	50	50	ENSMUST00000138870.2	ENSMUSG00000029630.16	Cyp3a25	chr5	protein_coding	cytochrome P450, family 3, subfamily a, polypeptide 25
chr5	146031270;146033150	146033062;146033387	+	146031270	146033387	cassetteExon	0.5	100	100	ENSMUST00000199212.5	ENSMUSG00000061292.11	Cyp3a59	chr5	protein_coding	cytochrome P450, family 3, subfamily a, polypeptide 59
chr5	146154906;146156152	146156075;146157212	-	146154906	146157212	cassetteExon	0.5	100	100	ENSMUST00000161859.8	ENSMUSG00000029634.16	Rnf6	chr5	protein_coding	ring finger protein (C3H2C3 type) 6
chr5	146152999	146154711	-	146153002	146154711	A3SS	0.5	50	50	ENSMUST00000161859.8	ENSMUSG00000029634.16	Rnf6	chr5	protein_coding	ring finger protein (C3H2C3 type) 6
chr5	146157294	146157548	-	146157294	146158030	A5SS	0.33	50	50	ENSMUST00000161859.8	ENSMUSG00000029634.16	Rnf6	chr5	protein_coding	ring finger protein (C3H2C3 type) 6
chr5	146157294	146157750	-	146157294	146158030	A5SS	0.33	50	50	ENSMUST00000161859.8	ENSMUSG00000029634.16	Rnf6	chr5	protein_coding	ring finger protein (C3H2C3 type) 6
chr5	146157294	146157750	-	146157294	146157548	5pMXE	0.33	50	50	ENSMUST00000169407.9	ENSMUSG00000029634.16	Rnf6	chr5	protein_coding	ring finger protein (C3H2C3 type) 6
chr5	146208545;146220496	146220439;146222918	+	146208545	146222918	cassetteExon	0.5	100	100	ENSMUST00000162494.8	ENSMUSG00000029635.16	Cdk8	chr5	protein_coding	cyclin-dependent kinase 8
chr5	146223049	146225147	+	146223049	146229434	A3SS	0.25	50	50	ENSMUST00000162494.8	ENSMUSG00000029635.16	Cdk8	chr5	protein_coding	cyclin-dependent kinase 8
chr5	146223049	146229449	+	146223049	146229434	A3SS	0.25	50	50	ENSMUST00000162494.8	ENSMUSG00000029635.16	Cdk8	chr5	protein_coding	cyclin-dependent kinase 8
chr5	146223049	146229464	+	146223049	146229434	A3SS	0.25	50	50	ENSMUST00000162494.8	ENSMUSG00000029635.16	Cdk8	chr5	protein_coding	cyclin-dependent kinase 8
chr5	146168144	146196315	+	146168630	146196315	A5SS	0.5	50	50	ENSMUST00000162494.8	ENSMUSG00000029635.16	Cdk8	chr5	protein_coding	cyclin-dependent kinase 8
chr5	146205096	146208405	+	146205135	146208405	A5SS	0.5	50	50	ENSMUST00000162494.8	ENSMUSG00000029635.16	Cdk8	chr5	protein_coding	cyclin-dependent kinase 8
chr5	146223049	146225147	+	146223049	146229449	A3SS	0.25	50	50	ENSMUST00000161181.8	ENSMUSG00000029635.16	Cdk8	chr5	protein_coding	cyclin-dependent kinase 8
chr5	146223049	146229464	+	146223049	146229449	A3SS	0.25	50	50	ENSMUST00000161181.8	ENSMUSG00000029635.16	Cdk8	chr5	protein_coding	cyclin-dependent kinase 8
chr5	146223049	146225147	+	146223049	146229464	A3SS	0.25	50	50	ENSMUST00000161652.8	ENSMUSG00000029635.16	Cdk8	chr5	protein_coding	cyclin-dependent kinase 8
chr5	146392471;146402829	146402660;146403608	+	146392471;146397950	146397775;146403608	MXE	0.5	100	100	ENSMUST00000016143.9	ENSMUSG00000029636.12	Wasf3	chr5	protein_coding	WASP family, member 3
chr5	146430142	146430394	+	146430142	146430406	A3SS	0.5	50	50	ENSMUST00000110611.8	ENSMUSG00000096527.6	Gm6370	chr5	protein_coding	predicted gene 6370
chr5	146452902	146453131	+	146452902	146453164	A3SS	0.5	50	50	ENSMUST00000200228.5	ENSMUSG00000041505.16	Gm3402	chr5	protein_coding	predicted gene 3402
chr5	146476427	146476689	+	146476427	146476677	A3SS	0.5	50	50	ENSMUST00000199142.5	ENSMUSG00000096664.8	Gm3409	chr5	protein_coding	predicted gene 3409
chr5	146520531	146521555	-	146520933	146521555	A3SS	0.33	50	50	ENSMUST00000036211.8	ENSMUSG00000041468.8	Gpr12	chr5	protein_coding	G-protein coupled receptor 12
chr5	146520928	146521555	-	146520933	146521555	A3SS	0.33	50	50	ENSMUST00000036211.8	ENSMUSG00000041468.8	Gpr12	chr5	protein_coding	G-protein coupled receptor 12
chr5	146520531	146521555	-	146520928	146521555	A3SS	0.33	50	50	ENSMUST00000197431.2	ENSMUSG00000041468.8	Gpr12	chr5	protein_coding	G-protein coupled receptor 12
chr5	146691409	146694955	-	146691409	146700011	A5SS	0.33	50	50	ENSMUST00000085614.6	ENSMUSG00000029640.18	Usp12	chr5	protein_coding	ubiquitin specific peptidase 12
chr5	146691409	146695176	-	146691409	146700011	A5SS	0.33	50	50	ENSMUST00000085614.6	ENSMUSG00000029640.18	Usp12	chr5	protein_coding	ubiquitin specific peptidase 12
chr5	146691409	146695176	-	146691409	146694955	A5SS	0.33	50	50	ENSMUST00000138202.8	ENSMUSG00000029640.18	Usp12	chr5	protein_coding	ubiquitin specific peptidase 12
chr5	146770376	146770994	+	146769981	146770994	A5SS	0.33	50	50	ENSMUST00000035983.12	ENSMUSG00000041453.13	Rpl21	chr5	protein_coding	ribosomal protein L21
chr5	146770550	146770994	+	146769981	146770994	A5SS	0.33	50	50	ENSMUST00000035983.12	ENSMUSG00000041453.13	Rpl21	chr5	protein_coding	ribosomal protein L21
chr5	146770550	146770994	+	146770376	146770994	A5SS	0.33	50	50	ENSMUST00000075453.9	ENSMUSG00000041453.13	Rpl21	chr5	protein_coding	ribosomal protein L21
chr5	146896086;146900190	146900031;146900522	-	146896086	146900522	cassetteExon	0.5	100	100	ENSMUST00000066675.10	ENSMUSG00000016510.12	Mtif3	chr5	protein_coding	mitochondrial translational initiation factor 3
chr5	146896086	146900497	-	146896086	146900522	A5SS	0.2	50	50	ENSMUST00000066675.10	ENSMUSG00000016510.12	Mtif3	chr5	protein_coding	mitochondrial translational initiation factor 3
chr5	146896086	146900533	-	146896086	146900522	A5SS	0.2	50	50	ENSMUST00000066675.10	ENSMUSG00000016510.12	Mtif3	chr5	protein_coding	mitochondrial translational initiation factor 3
chr5	146896086	146900576	-	146896086	146900522	A5SS	0.2	50	50	ENSMUST00000066675.10	ENSMUSG00000016510.12	Mtif3	chr5	protein_coding	mitochondrial translational initiation factor 3
chr5	146896086	146900533	-	146896086;146900190	146900031;146900533	ES	0.5	50	50	ENSMUST00000016654.9	ENSMUSG00000016510.12	Mtif3	chr5	protein_coding	mitochondrial translational initiation factor 3
chr5	146896086	146900497	-	146896086	146900031	A5SS&ES	0.2	50	50	ENSMUST00000016654.9	ENSMUSG00000016510.12	Mtif3	chr5	protein_coding	mitochondrial translational initiation factor 3
chr5	146896086	146900522	-	146896086	146900031	A5SS&ES	0.2	50	50	ENSMUST00000016654.9	ENSMUSG00000016510.12	Mtif3	chr5	protein_coding	mitochondrial translational initiation factor 3
chr5	146896086	146900576	-	146896086	146900031	A5SS&ES	0.2	50	50	ENSMUST00000016654.9	ENSMUSG00000016510.12	Mtif3	chr5	protein_coding	mitochondrial translational initiation factor 3
chr5	146900190	146900522	-	146900190	146900533	A5SS	0.5	50	50	ENSMUST00000016654.9	ENSMUSG00000016510.12	Mtif3	chr5	protein_coding	mitochondrial translational initiation factor 3
chr5	146896086	146900533	-	146896086	146900031	A5SS&ES	0.25	50	50	ENSMUST00000110564.8	ENSMUSG00000016510.12	Mtif3	chr5	protein_coding	mitochondrial translational initiation factor 3
chr5	146896086	146900497	-	146896086	146900533	A5SS	0.2	50	50	ENSMUST00000110566.2	ENSMUSG00000016510.12	Mtif3	chr5	protein_coding	mitochondrial translational initiation factor 3
chr5	146896086	146900576	-	146896086	146900533	A5SS	0.2	50	50	ENSMUST00000110566.2	ENSMUSG00000016510.12	Mtif3	chr5	protein_coding	mitochondrial translational initiation factor 3
chr5	146896086	146900576	-	146896086	146900497	5pMXE	0.2	50	50	ENSMUST00000125217.2	ENSMUSG00000016510.12	Mtif3	chr5	protein_coding	mitochondrial translational initiation factor 3
chr5	147014503	147038039	+	147014503	147015345	3pMXE	0.5	50	50	ENSMUST00000050970.4	ENSMUSG00000029642.12	Polr1d	chr5	protein_coding	polymerase (RNA) I polypeptide D
chr5	147038113;147041139	147040922;147047458	+	147038113	147047458	cassetteExon	0.5	100	100	ENSMUST00000110557.5	ENSMUSG00000029642.12	Polr1d	chr5	protein_coding	polymerase (RNA) I polypeptide D
chr5	147038109	147047458	+	147038113	147047458	A5SS	0.25	50	50	ENSMUST00000110557.5	ENSMUSG00000029642.12	Polr1d	chr5	protein_coding	polymerase (RNA) I polypeptide D
chr5	147042714	147047458	+	147038113	147047458	A5SS	0.25	50	50	ENSMUST00000110557.5	ENSMUSG00000029642.12	Polr1d	chr5	protein_coding	polymerase (RNA) I polypeptide D
chr5	147041139	147047458	+	147038109	147047458	A5SS	0.25	50	50	ENSMUST00000200993.2	ENSMUSG00000029642.12	Polr1d	chr5	protein_coding	polymerase (RNA) I polypeptide D
chr5	147042714	147047458	+	147038109	147047458	A5SS	0.25	50	50	ENSMUST00000200993.2	ENSMUSG00000029642.12	Polr1d	chr5	protein_coding	polymerase (RNA) I polypeptide D
chr5	147042714	147047458	+	147041139	147047458	A5SS	0.25	50	50	ENSMUST00000202444.2	ENSMUSG00000029642.12	Polr1d	chr5	protein_coding	polymerase (RNA) I polypeptide D
chr5	147168099;147174234	147174122;147208030	-	147168099;147177474	147175999;147208030	MXE	0.5	100	100	ENSMUST00000174285.8	ENSMUSG00000092570.8	Plut	chr5	lncRNA	PDX1 associated lncRNA, upregulator of transcription
chr5	147175861	147175999	-	147168099	147175999	A3SS	0.5	50	50	ENSMUST00000174285.8	ENSMUSG00000092570.8	Plut	chr5	lncRNA	PDX1 associated lncRNA, upregulator of transcription
chr5	147177474	147207680	-	147177474	147208030	A5SS	0.5	50	50	ENSMUST00000174285.8	ENSMUSG00000092570.8	Plut	chr5	lncRNA	PDX1 associated lncRNA, upregulator of transcription
chr5	147177474	147208030	-	147174234	147208030	A3SS	0.5	50	50	ENSMUST00000201192.2	ENSMUSG00000092570.8	Plut	chr5	lncRNA	PDX1 associated lncRNA, upregulator of transcription
chr5	147168099	147175999	-	147168099	147174122	A5SS&ES	0.5	50	50	ENSMUST00000201192.2	ENSMUSG00000092570.8	Plut	chr5	lncRNA	PDX1 associated lncRNA, upregulator of transcription
chr5	147301885	147303729	-	147294861	147303729	A3SS	0.5	50	50	ENSMUST00000049324.13	ENSMUSG00000042817.16	Flt3	chr5	protein_coding	FMS-like tyrosine kinase 3
chr5	147391998	147456315	+	147391998;147425068	147424921;147456315	ES	0.33	50	50	ENSMUST00000031651.15	ENSMUSG00000029647.16	Pan3	chr5	protein_coding	PAN3 poly(A) specific ribonuclease subunit
chr5	147463490	147463939	+	147463490;147463851	147463735;147463939	ES	0.5	50	50	ENSMUST00000031651.15	ENSMUSG00000029647.16	Pan3	chr5	protein_coding	PAN3 poly(A) specific ribonuclease subunit
chr5	147391998;147403907	147403746;147424921	+	147391998	147424921	cassetteExon	0.5	100	100	ENSMUST00000031651.15	ENSMUSG00000029647.16	Pan3	chr5	protein_coding	PAN3 poly(A) specific ribonuclease subunit
chr5	147425068;147440012	147439895;147456315	+	147425068	147456315	cassetteExon	0.5	100	100	ENSMUST00000031651.15	ENSMUSG00000029647.16	Pan3	chr5	protein_coding	PAN3 poly(A) specific ribonuclease subunit
chr5	147390128	147390394	+	147390128	147391928	A3SS	0.5	50	50	ENSMUST00000031651.15	ENSMUSG00000029647.16	Pan3	chr5	protein_coding	PAN3 poly(A) specific ribonuclease subunit
chr5	147425068	147429310	+	147425068	147456315	A3SS	0.33	50	50	ENSMUST00000031651.15	ENSMUSG00000029647.16	Pan3	chr5	protein_coding	PAN3 poly(A) specific ribonuclease subunit
chr5	147468117	147470040	+	147468117	147473211	A3SS	0.5	50	50	ENSMUST00000031651.15	ENSMUSG00000029647.16	Pan3	chr5	protein_coding	PAN3 poly(A) specific ribonuclease subunit
chr5	147482545	147485018	+	147482545	147483175	A3SS	0.5	50	50	ENSMUST00000031651.15	ENSMUSG00000029647.16	Pan3	chr5	protein_coding	PAN3 poly(A) specific ribonuclease subunit
chr5	147474084	147476053	+	147473350	147476053	A5SS	0.5	50	50	ENSMUST00000031651.15	ENSMUSG00000029647.16	Pan3	chr5	protein_coding	PAN3 poly(A) specific ribonuclease subunit
chr5	147391998	147458640	+	147391998;147456562	147456315;147458640	ES	0.5	50	50	ENSMUST00000176466.8	ENSMUSG00000029647.16	Pan3	chr5	protein_coding	PAN3 poly(A) specific ribonuclease subunit
chr5	147463490	147463939	+	147463490	147463735	3pMXE	0.5	50	50	ENSMUST00000176466.8	ENSMUSG00000029647.16	Pan3	chr5	protein_coding	PAN3 poly(A) specific ribonuclease subunit
chr5	147391998	147403746	+	147391998	147456315	A3SS	0.25	50	50	ENSMUST00000176466.8	ENSMUSG00000029647.16	Pan3	chr5	protein_coding	PAN3 poly(A) specific ribonuclease subunit
chr5	147440012	147456315	+	147391998	147456315	A5SS	0.33	50	50	ENSMUST00000176466.8	ENSMUSG00000029647.16	Pan3	chr5	protein_coding	PAN3 poly(A) specific ribonuclease subunit
chr5	147391998	147456315	+	147391998	147424921	3pMXE	0.25	50	50	ENSMUST00000177327.8	ENSMUSG00000029647.16	Pan3	chr5	protein_coding	PAN3 poly(A) specific ribonuclease subunit
chr5	147391998	147458640	+	147391998	147424921	3pMXE	0.25	50	50	ENSMUST00000177327.8	ENSMUSG00000029647.16	Pan3	chr5	protein_coding	PAN3 poly(A) specific ribonuclease subunit
chr5	147425068	147429310	+	147425068	147439895	A3SS	0.33	50	50	ENSMUST00000177465.8	ENSMUSG00000029647.16	Pan3	chr5	protein_coding	PAN3 poly(A) specific ribonuclease subunit
chr5	147391998	147403746	+	147391998	147458640	A3SS	0.25	50	50	ENSMUST00000200885.4	ENSMUSG00000029647.16	Pan3	chr5	protein_coding	PAN3 poly(A) specific ribonuclease subunit
chr5	147391998	147458640	+	147456562	147458640	5pMXE	0.5	50	50	ENSMUST00000177328.3	ENSMUSG00000029647.16	Pan3	chr5	protein_coding	PAN3 poly(A) specific ribonuclease subunit
chr5	147541690	147551939	-	147540436	147551939	A3SS	0.33	50	50	ENSMUST00000031653.12	ENSMUSG00000029648.14	Flt1	chr5	protein_coding	FMS-like tyrosine kinase 1
chr5	147551725	147551939	-	147540436	147551939	A3SS	0.33	50	50	ENSMUST00000031653.12	ENSMUSG00000029648.14	Flt1	chr5	protein_coding	FMS-like tyrosine kinase 1
chr5	147591319	147591907	-	147583043	147591907	A3SS	0.5	50	50	ENSMUST00000031653.12	ENSMUSG00000029648.14	Flt1	chr5	protein_coding	FMS-like tyrosine kinase 1
chr5	147551725	147551939	-	147541690	147551939	A3SS	0.33	50	50	ENSMUST00000125272.2	ENSMUSG00000029648.14	Flt1	chr5	protein_coding	FMS-like tyrosine kinase 1
chr5	147806323	147812274	+	147806323;147809469	147809376;147812274	ES	0.5	50	50	ENSMUST00000031654.10	ENSMUSG00000029649.11	Pomp	chr5	protein_coding	proteasome maturation protein
chr5	147807277	147809376	+	147806323	147809376	A5SS	0.5	50	50	ENSMUST00000031654.10	ENSMUSG00000029649.11	Pomp	chr5	protein_coding	proteasome maturation protein
chr5	147806323	147812274	+	147809469	147812274	5pMXE	0.5	50	50	ENSMUST00000202621.2	ENSMUSG00000029649.11	Pomp	chr5	protein_coding	proteasome maturation protein
chr5	147830855;147831406	147831291;147831519	-	147830855	147831519	cassetteExon	0.5	100	100	ENSMUST00000118527.8	ENSMUSG00000029650.11	Slc46a3	chr5	protein_coding	solute carrier family 46, member 3
chr5	147830855	147831519	-	147830855	147831291	A5SS	0.5	50	50	ENSMUST00000031655.4	ENSMUSG00000029650.11	Slc46a3	chr5	protein_coding	solute carrier family 46, member 3
chr5	148235135	148240293	+	148235135;148238306	148238208;148240293	ES	0.2	50	50	ENSMUST00000085558.11	ENSMUSG00000029651.17	Mtus2	chr5	protein_coding	microtubule associated tumor suppressor candidate 2
chr5	147894531	148012990	+	147894845	148012990	A5SS	0.5	50	50	ENSMUST00000085558.11	ENSMUSG00000029651.17	Mtus2	chr5	protein_coding	microtubule associated tumor suppressor candidate 2
chr5	148031110	148043815	+	148020007	148043815	A5SS	0.5	50	50	ENSMUST00000085558.11	ENSMUSG00000029651.17	Mtus2	chr5	protein_coding	microtubule associated tumor suppressor candidate 2
chr5	148202273	148214410	+	148173287	148214410	A5SS	0.5	50	50	ENSMUST00000085558.11	ENSMUSG00000029651.17	Mtus2	chr5	protein_coding	microtubule associated tumor suppressor candidate 2
chr5	148202273	148225684	+	148214476	148225684	A5SS&ES	0.5	50	50	ENSMUST00000085558.11	ENSMUSG00000029651.17	Mtus2	chr5	protein_coding	microtubule associated tumor suppressor candidate 2
chr5	148240079	148240293	+	148238306	148240293	A5SS	0.2	50	50	ENSMUST00000085558.11	ENSMUSG00000029651.17	Mtus2	chr5	protein_coding	microtubule associated tumor suppressor candidate 2
chr5	148240186	148240293	+	148238306	148240293	A5SS	0.2	50	50	ENSMUST00000085558.11	ENSMUSG00000029651.17	Mtus2	chr5	protein_coding	microtubule associated tumor suppressor candidate 2
chr5	148202273	148225684	+	148202273;148214476	148214410;148225684	ES	0.5	50	50	ENSMUST00000110515.9	ENSMUSG00000029651.17	Mtus2	chr5	protein_coding	microtubule associated tumor suppressor candidate 2
chr5	148232398;148235135	148235062;148240293	+	148232398	148240293	cassetteExon	0.5	100	100	ENSMUST00000071878.12	ENSMUSG00000029651.17	Mtus2	chr5	protein_coding	microtubule associated tumor suppressor candidate 2
chr5	148238306	148240293	+	148232398	148240293	A5SS	0.2	50	50	ENSMUST00000071878.12	ENSMUSG00000029651.17	Mtus2	chr5	protein_coding	microtubule associated tumor suppressor candidate 2
chr5	148240079	148240293	+	148232398	148240293	A5SS	0.2	50	50	ENSMUST00000071878.12	ENSMUSG00000029651.17	Mtus2	chr5	protein_coding	microtubule associated tumor suppressor candidate 2
chr5	148240186	148240293	+	148232398	148240293	A5SS	0.2	50	50	ENSMUST00000071878.12	ENSMUSG00000029651.17	Mtus2	chr5	protein_coding	microtubule associated tumor suppressor candidate 2
chr5	148240079	148240293	+	148235135	148240293	A5SS	0.2	50	50	ENSMUST00000110514.8	ENSMUSG00000029651.17	Mtus2	chr5	protein_coding	microtubule associated tumor suppressor candidate 2
chr5	148240186	148240293	+	148235135	148240293	A5SS	0.2	50	50	ENSMUST00000110514.8	ENSMUSG00000029651.17	Mtus2	chr5	protein_coding	microtubule associated tumor suppressor candidate 2
chr5	148240079	148240293	+	148240186	148240293	A5SS	0.2	50	50	ENSMUST00000152105.8	ENSMUSG00000029651.17	Mtus2	chr5	protein_coding	microtubule associated tumor suppressor candidate 2
chr5	148285121	148301972	-	148285121;148289259	148288876;148301972	ES	0.5	50	50	ENSMUST00000048116.15	ENSMUSG00000041313.15	Slc7a1	chr5	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
chr5	148302061	148308069	-	148302061	148336539	A5SS	0.33	50	50	ENSMUST00000048116.15	ENSMUSG00000041313.15	Slc7a1	chr5	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
chr5	148302061	148329566	-	148302061	148336539	A5SS	0.33	50	50	ENSMUST00000048116.15	ENSMUSG00000041313.15	Slc7a1	chr5	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
chr5	148302061	148308069	-	148302061	148329566	A5SS	0.33	50	50	ENSMUST00000138257.8	ENSMUSG00000041313.15	Slc7a1	chr5	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
chr5	148285121	148301972	-	148289259	148301972	3pMXE	0.5	50	50	ENSMUST00000138596.2	ENSMUSG00000041313.15	Slc7a1	chr5	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
chr5	148448812	148474334	-	148448812	148488763	A5SS	0.25	50	50	ENSMUST00000079324.14	ENSMUSG00000001687.16	Ubl3	chr5	protein_coding	ubiquitin-like 3
chr5	148448812	148488269	-	148448812	148488763	A5SS	0.25	50	50	ENSMUST00000079324.14	ENSMUSG00000001687.16	Ubl3	chr5	protein_coding	ubiquitin-like 3
chr5	148448812	148488315	-	148448812	148488763	A5SS	0.25	50	50	ENSMUST00000079324.14	ENSMUSG00000001687.16	Ubl3	chr5	protein_coding	ubiquitin-like 3
chr5	148448812	148488269	-	148448812	148474334	5pMXE	0.25	50	50	ENSMUST00000201688.4	ENSMUSG00000001687.16	Ubl3	chr5	protein_coding	ubiquitin-like 3
chr5	148448812	148488315	-	148448812	148474334	5pMXE	0.25	50	50	ENSMUST00000201688.4	ENSMUSG00000001687.16	Ubl3	chr5	protein_coding	ubiquitin-like 3
chr5	148448812	148488269	-	148448812	148488315	A5SS	0.25	50	50	ENSMUST00000201139.4	ENSMUSG00000001687.16	Ubl3	chr5	protein_coding	ubiquitin-like 3
chr5	148858222	148865698	-	148858222	148865336	5pMXE	0.25	50	50	ENSMUST00000047257.15	ENSMUSG00000041298.16	Katnal1	chr5	protein_coding	katanin p60 subunit A-like 1
chr5	148858222	148917854	-	148858222	148865336	5pMXE	0.25	50	50	ENSMUST00000047257.15	ENSMUSG00000041298.16	Katnal1	chr5	protein_coding	katanin p60 subunit A-like 1
chr5	148823115	148825689	-	148815794	148825689	A3SS	0.5	50	50	ENSMUST00000047257.15	ENSMUSG00000041298.16	Katnal1	chr5	protein_coding	katanin p60 subunit A-like 1
chr5	148858222	148865146	-	148858222	148865336	A5SS	0.25	50	50	ENSMUST00000047257.15	ENSMUSG00000041298.16	Katnal1	chr5	protein_coding	katanin p60 subunit A-like 1
chr5	148858222	148917854	-	148858222	148865698	5pMXE	0.25	50	50	ENSMUST00000110509.9	ENSMUSG00000041298.16	Katnal1	chr5	protein_coding	katanin p60 subunit A-like 1
chr5	148858222	148865146	-	148858222	148865698	A5SS	0.25	50	50	ENSMUST00000110509.9	ENSMUSG00000041298.16	Katnal1	chr5	protein_coding	katanin p60 subunit A-like 1
chr5	148858222	148917854	-	148858222	148865146	5pMXE	0.25	50	50	ENSMUST00000149169.3	ENSMUSG00000041298.16	Katnal1	chr5	protein_coding	katanin p60 subunit A-like 1
chr5	148864231	148865146	-	148858222	148865146	A3SS	0.5	50	50	ENSMUST00000149169.3	ENSMUSG00000041298.16	Katnal1	chr5	protein_coding	katanin p60 subunit A-like 1
chr5	148917331	148917854	-	148858222	148917854	A3SS	0.5	50	50	ENSMUST00000147473.6	ENSMUSG00000106892.2	Gm42791	chr5	protein_coding	predicted gene 42791
chr5	148930334	148931928	-	148917908	148931928	A3SS	0.33	50	50	ENSMUST00000147473.6	ENSMUSG00000106892.2	Gm42791	chr5	protein_coding	predicted gene 42791
chr5	148930753	148931928	-	148917908	148931928	A3SS	0.33	50	50	ENSMUST00000147473.6	ENSMUSG00000106892.2	Gm42791	chr5	protein_coding	predicted gene 42791
chr5	148892011	148933131	-	148885818	148933131	A3SS	0.5	50	50	ENSMUST00000133694.2	ENSMUSG00000085237.3	Gm15406	chr5	lncRNA	predicted gene 15406
chr5	148892011	148895958	-	148892011	148933131	A5SS	0.5	50	50	ENSMUST00000202229.2	ENSMUSG00000085237.3	Gm15406	chr5	lncRNA	predicted gene 15406
chr5	148896020	148900704	-	148896020	148896719	5pMXE	0.5	50	50	ENSMUST00000203249.3	ENSMUSG00000108207.3	1810059H22Rik	chr5	lncRNA	RIKEN cDNA 1810059H22 gene
chr5	148895540	148895958	-	148892011	148895958	A3SS	0.5	50	50	ENSMUST00000203249.3	ENSMUSG00000108207.3	1810059H22Rik	chr5	lncRNA	RIKEN cDNA 1810059H22 gene
chr5	148900805	148901752	-	148900805	148901653	A5SS	0.5	50	50	ENSMUST00000203662.2	ENSMUSG00000108207.3	1810059H22Rik	chr5	lncRNA	RIKEN cDNA 1810059H22 gene
chr5	148930334	148931928	-	148930753	148931928	A3SS	0.33	50	50	ENSMUST00000145042.2	ENSMUSG00000106951.2	5930430L01Rik	chr5	lncRNA	RIKEN cDNA 5930430L01 gene
chr5	148936781	148952345	-	148936781	148952245	A5SS	0.5	50	50	ENSMUST00000133243.5	ENSMUSG00000085971.5	Gm15411	chr5	lncRNA	predicted gene 15411
chr5	148987561	149118809	-	148987561	148989710	5pMXE	0.25	50	50	ENSMUST00000085546.13	ENSMUSG00000066551.13	Hmgb1	chr5	protein_coding	high mobility group box 1
chr5	148987561	148988089	-	148987561	148989710	A5SS	0.25	50	50	ENSMUST00000085546.13	ENSMUSG00000066551.13	Hmgb1	chr5	protein_coding	high mobility group box 1
chr5	148987561	148989148	-	148987561	148989710	A5SS	0.25	50	50	ENSMUST00000085546.13	ENSMUSG00000066551.13	Hmgb1	chr5	protein_coding	high mobility group box 1
chr5	148987561	148989148	-	148987561	148988089	5pMXE	0.25	50	50	ENSMUST00000093196.11	ENSMUSG00000066551.13	Hmgb1	chr5	protein_coding	high mobility group box 1
chr5	148987561	149118809	-	148987561	148988089	5pMXE	0.25	50	50	ENSMUST00000093196.11	ENSMUSG00000066551.13	Hmgb1	chr5	protein_coding	high mobility group box 1
chr5	148987561	148989148	-	148987561	149118809	A5SS	0.25	50	50	ENSMUST00000202133.4	ENSMUSG00000066551.13	Hmgb1	chr5	protein_coding	high mobility group box 1
chr5	149118845	149120848	-	149118845	149121258	A5SS	0.5	50	50	ENSMUST00000202133.4	ENSMUSG00000066551.13	Hmgb1	chr5	protein_coding	high mobility group box 1
chr5	149056639	149060107	-	149056639	149064184	A5SS	0.5	50	50	ENSMUST00000180733.2	ENSMUSG00000097191.3	Mm2pr	chr5	lncRNA	macrophage M2 polarization regulator
chr5	149121616;149124644	149124518;149125155	+	149121616	149125155	cassetteExon	0.5	100	100	ENSMUST00000121416.8	ENSMUSG00000041264.17	Uspl1	chr5	protein_coding	ubiquitin specific peptidase like 1
chr5	149121616;149124686	149124518;149125155	+	149121616	149125155	cassetteExon	0.5	100	100	ENSMUST00000121416.8	ENSMUSG00000041264.17	Uspl1	chr5	protein_coding	ubiquitin specific peptidase like 1
chr5	149121616	149122295	+	149121616	149125155	A3SS	0.33	50	50	ENSMUST00000121416.8	ENSMUSG00000041264.17	Uspl1	chr5	protein_coding	ubiquitin specific peptidase like 1
chr5	149125283	149130705	+	149125283	149130650	A3SS	0.33	50	50	ENSMUST00000121416.8	ENSMUSG00000041264.17	Uspl1	chr5	protein_coding	ubiquitin specific peptidase like 1
chr5	149125283	149130708	+	149125283	149130650	A3SS	0.33	50	50	ENSMUST00000121416.8	ENSMUSG00000041264.17	Uspl1	chr5	protein_coding	ubiquitin specific peptidase like 1
chr5	149121616;149122471	149122295;149124518	+	149121616	149124518	cassetteExon	0.5	100	100	ENSMUST00000050472.16	ENSMUSG00000041264.17	Uspl1	chr5	protein_coding	ubiquitin specific peptidase like 1
chr5	149124644	149125155	+	149124686	149125155	A5SS	0.33	50	50	ENSMUST00000050472.16	ENSMUSG00000041264.17	Uspl1	chr5	protein_coding	ubiquitin specific peptidase like 1
chr5	149125283	149130708	+	149125283	149130705	A3SS	0.33	50	50	ENSMUST00000139474.8	ENSMUSG00000041264.17	Uspl1	chr5	protein_coding	ubiquitin specific peptidase like 1
chr5	149174237	149174344	+	149174237	149174347	A3SS	0.5	50	50	ENSMUST00000189493.2	ENSMUSG00000100783.2	2310047D07Rik	chr5	lncRNA	RIKEN cDNA 2310047D07 gene
chr5	149202199	149209191	+	149201992	149209191	A5SS	0.5	50	50	ENSMUST00000071130.5	ENSMUSG00000060063.10	Alox5ap	chr5	protein_coding	arachidonate 5-lipoxygenase activating protein
chr5	149215915	149222154	+	149216056	149222154	A5SS&ES	0.5	50	50	ENSMUST00000071130.5	ENSMUSG00000060063.10	Alox5ap	chr5	protein_coding	arachidonate 5-lipoxygenase activating protein
chr5	149224255	149224382	+	149222235	149224382	A5SS	0.5	50	50	ENSMUST00000071130.5	ENSMUSG00000060063.10	Alox5ap	chr5	protein_coding	arachidonate 5-lipoxygenase activating protein
chr5	149292743	149300134	+	149292743;149299533	149295985;149300134	ES	0.5	50	50	ENSMUST00000202022.4	ENSMUSG00000107271.4	BC028471	chr5	lncRNA	cDNA sequence BC028471
chr5	149315667	149316974	+	149315667;149316192	149316097;149316974	ES	0.5	50	50	ENSMUST00000202022.4	ENSMUSG00000107271.4	BC028471	chr5	lncRNA	cDNA sequence BC028471
chr5	149292743	149297749	+	149292743	149295985	A3SS	0.2	50	50	ENSMUST00000202022.4	ENSMUSG00000107271.4	BC028471	chr5	lncRNA	cDNA sequence BC028471
chr5	149292743	149299293	+	149292743	149295985	A3SS	0.2	50	50	ENSMUST00000202022.4	ENSMUSG00000107271.4	BC028471	chr5	lncRNA	cDNA sequence BC028471
chr5	149292743	149299403	+	149292743	149295985	A3SS	0.2	50	50	ENSMUST00000202022.4	ENSMUSG00000107271.4	BC028471	chr5	lncRNA	cDNA sequence BC028471
chr5	149300256	149300599	+	149300256	149315573	A3SS	0.33	50	50	ENSMUST00000202022.4	ENSMUSG00000107271.4	BC028471	chr5	lncRNA	cDNA sequence BC028471
chr5	149300256	149309138	+	149300256	149315573	A3SS	0.33	50	50	ENSMUST00000202022.4	ENSMUSG00000107271.4	BC028471	chr5	lncRNA	cDNA sequence BC028471
chr5	149292743	149299403	+	149292743;149297838	149297749;149299403	ES	0.5	50	50	ENSMUST00000200937.4	ENSMUSG00000107271.4	BC028471	chr5	lncRNA	cDNA sequence BC028471
chr5	149292743	149299293	+	149292743	149297749	A3SS&ES	0.2	50	50	ENSMUST00000200937.4	ENSMUSG00000107271.4	BC028471	chr5	lncRNA	cDNA sequence BC028471
chr5	149292743	149300134	+	149292743;149299533	149299293;149300134	ES	0.5	50	50	ENSMUST00000202654.4	ENSMUSG00000107271.4	BC028471	chr5	lncRNA	cDNA sequence BC028471
chr5	149292743	149299403	+	149292743	149299293	A3SS	0.2	50	50	ENSMUST00000202654.4	ENSMUSG00000107271.4	BC028471	chr5	lncRNA	cDNA sequence BC028471
chr5	149300256	149300599	+	149300256	149309138	A3SS	0.33	50	50	ENSMUST00000202654.4	ENSMUSG00000107271.4	BC028471	chr5	lncRNA	cDNA sequence BC028471
chr5	149292743	149300134	+	149292743;149299533	149299403;149300134	ES	0.5	50	50	ENSMUST00000201444.2	ENSMUSG00000107271.4	BC028471	chr5	lncRNA	cDNA sequence BC028471
chr5	149315667	149328684	+	149315667	149316974	3pMXE	0.33	50	50	ENSMUST00000202485.2	ENSMUSG00000107271.4	BC028471	chr5	lncRNA	cDNA sequence BC028471
chr5	149345708;149350511	149350399;149350686	+	149345708	149350686	cassetteExon	0.5	100	100	ENSMUST00000201641.2	ENSMUSG00000107314.2	Gm20488	chr5	lncRNA	predicted gene 20488
chr5	149292743	149295985	+	149292743	149300134	A3SS	0.2	50	50	ENSMUST00000201641.2	ENSMUSG00000107314.2	Gm20488	chr5	lncRNA	predicted gene 20488
chr5	149292743	149297749	+	149292743	149300134	A3SS	0.2	50	50	ENSMUST00000201641.2	ENSMUSG00000107314.2	Gm20488	chr5	lncRNA	predicted gene 20488
chr5	149315667	149316097	+	149315667	149328684	A3SS	0.33	50	50	ENSMUST00000201641.2	ENSMUSG00000107314.2	Gm20488	chr5	lncRNA	predicted gene 20488
chr5	149337548	149345599	+	149335720	149345599	A5SS	0.5	50	50	ENSMUST00000201641.2	ENSMUSG00000107314.2	Gm20488	chr5	lncRNA	predicted gene 20488
chr5	149363252	149376759	+	149363252;149369319	149369238;149376759	ES	0.33	50	50	ENSMUST00000031667.8	ENSMUSG00000029660.11	Tex26	chr5	protein_coding	testis expressed 26
chr5	149369319;149371232	149371225;149376759	+	149369319	149376759	cassetteExon	0.5	100	100	ENSMUST00000031667.8	ENSMUSG00000029660.11	Tex26	chr5	protein_coding	testis expressed 26
chr5	149380427;149380711	149380526;149384286	+	149380427	149384286	cassetteExon	0.5	100	100	ENSMUST00000031667.8	ENSMUSG00000029660.11	Tex26	chr5	protein_coding	testis expressed 26
chr5	149380427;149382378	149382251;149384286	+	149380427	149384286	cassetteExon	0.5	100	100	ENSMUST00000031667.8	ENSMUSG00000029660.11	Tex26	chr5	protein_coding	testis expressed 26
chr5	149363252	149364223	+	149363252	149369238	A3SS	0.25	50	50	ENSMUST00000031667.8	ENSMUSG00000029660.11	Tex26	chr5	protein_coding	testis expressed 26
chr5	149363252	149369235	+	149363252	149369238	A3SS	0.25	50	50	ENSMUST00000031667.8	ENSMUSG00000029660.11	Tex26	chr5	protein_coding	testis expressed 26
chr5	149363252	149369235	+	149363252	149364223	3pMXE	0.25	50	50	ENSMUST00000201454.2	ENSMUSG00000029660.11	Tex26	chr5	protein_coding	testis expressed 26
chr5	149363252	149376759	+	149363252	149364223	3pMXE	0.25	50	50	ENSMUST00000201454.2	ENSMUSG00000029660.11	Tex26	chr5	protein_coding	testis expressed 26
chr5	149363252	149376759	+	149363252;149369319	149369235;149376759	ES	0.33	50	50	ENSMUST00000201683.4	ENSMUSG00000029660.11	Tex26	chr5	protein_coding	testis expressed 26
chr5	149371232	149376759	+	149363252	149376759	A5SS	0.33	50	50	ENSMUST00000202920.4	ENSMUSG00000029660.11	Tex26	chr5	protein_coding	testis expressed 26
chr5	149380427;149380711	149380526;149384286	+	149380427;149382378	149382251;149384286	MXE	0.5	100	100	ENSMUST00000200985.4	ENSMUSG00000029660.11	Tex26	chr5	protein_coding	testis expressed 26
chr5	149487891	149497454	+	149487891;149489933	149489828;149497454	ES	0.5	50	50	ENSMUST00000110502.7	ENSMUSG00000029658.18	Wdr95	chr5	protein_coding	WD40 repeat domain 95
chr5	149475953	149487648	+	149475953	149486681	A3SS&ES	0.5	50	50	ENSMUST00000110502.7	ENSMUSG00000029658.18	Wdr95	chr5	protein_coding	WD40 repeat domain 95
chr5	149522862	149523097	+	149522862	149529754	A3SS	0.5	50	50	ENSMUST00000110502.7	ENSMUSG00000029658.18	Wdr95	chr5	protein_coding	WD40 repeat domain 95
chr5	149453270	149456125	+	149452236	149456125	A5SS	0.5	50	50	ENSMUST00000110502.7	ENSMUSG00000029658.18	Wdr95	chr5	protein_coding	WD40 repeat domain 95
chr5	149460096	149468207	+	149456171	149468207	A5SS	0.5	50	50	ENSMUST00000110502.7	ENSMUSG00000029658.18	Wdr95	chr5	protein_coding	WD40 repeat domain 95
chr5	149504454	149505293	+	149504349	149505293	A5SS	0.5	50	50	ENSMUST00000110502.7	ENSMUSG00000029658.18	Wdr95	chr5	protein_coding	WD40 repeat domain 95
chr5	149475953;149486710	149486681;149487648	+	149475953	149487648	cassetteExon	0.5	100	100	ENSMUST00000201525.4	ENSMUSG00000029658.18	Wdr95	chr5	protein_coding	WD40 repeat domain 95
chr5	149544148	149548434	-	149544148;149547061	149546930;149548434	ES	0.5	50	50	ENSMUST00000201452.4	ENSMUSG00000029657.16	Hsph1	chr5	protein_coding	heat shock 105kDa/110kDa protein 1
chr5	149554324	149555499	-	149554324;149554974	149554852;149555499	ES	0.5	50	50	ENSMUST00000201452.4	ENSMUSG00000029657.16	Hsph1	chr5	protein_coding	heat shock 105kDa/110kDa protein 1
chr5	149557352	149559785	-	149557352	149559435	5pMXE	0.33	50	50	ENSMUST00000201452.4	ENSMUSG00000029657.16	Hsph1	chr5	protein_coding	heat shock 105kDa/110kDa protein 1
chr5	149555639;149555875	149555757;149557295	-	149555639	149557295	cassetteExon	0.5	100	100	ENSMUST00000201452.4	ENSMUSG00000029657.16	Hsph1	chr5	protein_coding	heat shock 105kDa/110kDa protein 1
chr5	149557352	149559624	-	149557352	149559435	A5SS	0.33	50	50	ENSMUST00000201452.4	ENSMUSG00000029657.16	Hsph1	chr5	protein_coding	heat shock 105kDa/110kDa protein 1
chr5	149544148	149548434	-	149547061	149548434	A3SS	0.5	50	50	ENSMUST00000201431.4	ENSMUSG00000029657.16	Hsph1	chr5	protein_coding	heat shock 105kDa/110kDa protein 1
chr5	149557352;149559624	149559435;149559785	-	149557352	149559785	cassetteExon	0.5	100	100	ENSMUST00000201559.4	ENSMUSG00000029657.16	Hsph1	chr5	protein_coding	heat shock 105kDa/110kDa protein 1
chr5	149557352	149559624	-	149557352	149559785	A5SS	0.33	50	50	ENSMUST00000201559.4	ENSMUSG00000029657.16	Hsph1	chr5	protein_coding	heat shock 105kDa/110kDa protein 1
chr5	149674015	149674496	+	149674015	149677530	A3SS	0.5	50	50	ENSMUST00000100404.6	ENSMUSG00000051950.11	B3glct	chr5	protein_coding	beta-3-glucosyltransferase
chr5	149771937	149787556	+	149771937;149776358	149776256;149787556	ES	0.5	50	50	ENSMUST00000202177.4	ENSMUSG00000107214.4	4930500F04Rik	chr5	lncRNA	RIKEN cDNA 4930500F04 gene
chr5	149775927	149776256	+	149771937	149776256	A5SS	0.5	50	50	ENSMUST00000202177.4	ENSMUSG00000107214.4	4930500F04Rik	chr5	lncRNA	RIKEN cDNA 4930500F04 gene
chr5	149979447	149983345	+	149979447;149980327	149980256;149983345	ES	0.5	50	50	ENSMUST00000143989.2	ENSMUSG00000053368.14	Rxfp2	chr5	protein_coding	relaxin/insulin-like family peptide receptor 2
chr5	149973116	149974983	+	149973116	149975025	A3SS	0.5	50	50	ENSMUST00000143989.2	ENSMUSG00000053368.14	Rxfp2	chr5	protein_coding	relaxin/insulin-like family peptide receptor 2
chr5	150004152	150004410	+	149993863	150004410	A5SS	0.5	50	50	ENSMUST00000065745.10	ENSMUSG00000053368.14	Rxfp2	chr5	protein_coding	relaxin/insulin-like family peptide receptor 2
chr5	150042276	150233735	+	150042276;150120200	150120028;150233735	ES	0.25	50	50	ENSMUST00000200960.4	ENSMUSG00000056602.14	Fry	chr5	protein_coding	FRY microtubule binding protein
chr5	150183803	150233735	+	150120200	150233735	A5SS	0.25	50	50	ENSMUST00000200960.4	ENSMUSG00000056602.14	Fry	chr5	protein_coding	FRY microtubule binding protein
chr5	150219149	150233735	+	150120200	150233735	A5SS	0.25	50	50	ENSMUST00000200960.4	ENSMUSG00000056602.14	Fry	chr5	protein_coding	FRY microtubule binding protein
chr5	150183803	150233735	+	150042276	150233735	A5SS	0.25	50	50	ENSMUST00000202530.4	ENSMUSG00000056602.14	Fry	chr5	protein_coding	FRY microtubule binding protein
chr5	150219149	150233735	+	150042276	150233735	A5SS	0.25	50	50	ENSMUST00000202530.4	ENSMUSG00000056602.14	Fry	chr5	protein_coding	FRY microtubule binding protein
chr5	150042276	150233735	+	150120200	150233735	5pMXE	0.25	50	50	ENSMUST00000202600.4	ENSMUSG00000056602.14	Fry	chr5	protein_coding	FRY microtubule binding protein
chr5	150381380;150384862	150384854;150389709	+	150381380	150389709	cassetteExon	0.5	100	100	ENSMUST00000087204.9	ENSMUSG00000056602.14	Fry	chr5	protein_coding	FRY microtubule binding protein
chr5	150405041;150412443	150412426;150414543	+	150405041	150414543	cassetteExon	0.5	100	100	ENSMUST00000087204.9	ENSMUSG00000056602.14	Fry	chr5	protein_coding	FRY microtubule binding protein
chr5	150219149	150233735	+	150183803	150233735	A5SS	0.25	50	50	ENSMUST00000087204.9	ENSMUSG00000056602.14	Fry	chr5	protein_coding	FRY microtubule binding protein
chr5	150423315	150425320	-	150423315;150425181	150425145;150425320	ES	0.5	50	50	ENSMUST00000202386.2	ENSMUSG00000106738.2	Gm5	chr5	lncRNA	predicted gene 5
chr5	150446744	150449832	+	150446744	150452935	A3SS	0.5	50	50	ENSMUST00000200686.4	ENSMUSG00000041147.11	Brca2	chr5	protein_coding	breast cancer 2, early onset
chr5	150446361	150446640	+	150446555	150446640	A5SS	0.33	50	50	ENSMUST00000200686.4	ENSMUSG00000041147.11	Brca2	chr5	protein_coding	breast cancer 2, early onset
chr5	150446415	150446640	+	150446555	150446640	A5SS	0.33	50	50	ENSMUST00000200686.4	ENSMUSG00000041147.11	Brca2	chr5	protein_coding	breast cancer 2, early onset
chr5	150452664	150452935	+	150446744	150452935	A5SS	0.5	50	50	ENSMUST00000200686.4	ENSMUSG00000041147.11	Brca2	chr5	protein_coding	breast cancer 2, early onset
chr5	150491233	150492379	+	150491233	150492404	A3SS	0.5	50	50	ENSMUST00000044620.11	ENSMUSG00000041147.11	Brca2	chr5	protein_coding	breast cancer 2, early onset
chr5	150490108	150490353	+	150484288	150490353	A5SS	0.5	50	50	ENSMUST00000044620.11	ENSMUSG00000041147.11	Brca2	chr5	protein_coding	breast cancer 2, early onset
chr5	150446415	150446640	+	150446361	150446640	A5SS	0.33	50	50	ENSMUST00000202975.4	ENSMUSG00000041147.11	Brca2	chr5	protein_coding	breast cancer 2, early onset
chr5	150500232	150520539	-	150500232	150517729	5pMXE	0.33	50	50	ENSMUST00000016279.11	ENSMUSG00000041132.12	N4bp2l1	chr5	protein_coding	NEDD4 binding protein 2-like 1
chr5	150500232;150500764	150500637;150517729	-	150500232	150517729	cassetteExon	0.5	100	100	ENSMUST00000016279.11	ENSMUSG00000041132.12	N4bp2l1	chr5	protein_coding	NEDD4 binding protein 2-like 1
chr5	150516683	150517729	-	150500232	150517729	A3SS	0.25	50	50	ENSMUST00000016279.11	ENSMUSG00000041132.12	N4bp2l1	chr5	protein_coding	NEDD4 binding protein 2-like 1
chr5	150516902	150517729	-	150500232	150517729	A3SS	0.25	50	50	ENSMUST00000016279.11	ENSMUSG00000041132.12	N4bp2l1	chr5	protein_coding	NEDD4 binding protein 2-like 1
chr5	150516683	150517729	-	150500764	150517729	A3SS	0.25	50	50	ENSMUST00000202279.4	ENSMUSG00000041132.12	N4bp2l1	chr5	protein_coding	NEDD4 binding protein 2-like 1
chr5	150516902	150517729	-	150500764	150517729	A3SS	0.25	50	50	ENSMUST00000202279.4	ENSMUSG00000041132.12	N4bp2l1	chr5	protein_coding	NEDD4 binding protein 2-like 1
chr5	150500232	150500637	-	150500232	150520539	A5SS	0.33	50	50	ENSMUST00000202291.3	ENSMUSG00000041132.12	N4bp2l1	chr5	protein_coding	NEDD4 binding protein 2-like 1
chr5	150516683	150517729	-	150516902	150517729	A3SS	0.5	50	50	ENSMUST00000200840.2	ENSMUSG00000041132.12	N4bp2l1	chr5	protein_coding	NEDD4 binding protein 2-like 1
chr5	150525943	150527642	-	150524120	150527642	A3SS	0.5	50	50	ENSMUST00000201650.4	ENSMUSG00000107096.4	Gm43597	chr5	lncRNA	predicted gene 43597
chr5	150585978	150588616	-	150585978	150588966	A5SS	0.5	50	50	ENSMUST00000118316.8	ENSMUSG00000029655.18	N4bp2l2	chr5	protein_coding	NEDD4 binding protein 2-like 2
chr5	150571013	150574080	-	150566780	150574080	A3SS	0.5	50	50	ENSMUST00000156180.2	ENSMUSG00000029655.18	N4bp2l2	chr5	protein_coding	NEDD4 binding protein 2-like 2
chr5	150566780	150570466	-	150566780	150574080	A5SS	0.5	50	50	ENSMUST00000156180.2	ENSMUSG00000029655.18	N4bp2l2	chr5	protein_coding	NEDD4 binding protein 2-like 2
chr5	150671712	150671921	+	150671712	150673299	A3SS	0.5	50	50	ENSMUST00000202170.4	ENSMUSG00000034021.16	Pds5b	chr5	protein_coding	PDS5 cohesin associated factor B
chr5	150724482	150724584	+	150724482	150724587	A3SS	0.5	50	50	ENSMUST00000202170.4	ENSMUSG00000034021.16	Pds5b	chr5	protein_coding	PDS5 cohesin associated factor B
chr5	150683195	150684484	+	150682276	150684484	A5SS	0.5	50	50	ENSMUST00000202170.4	ENSMUSG00000034021.16	Pds5b	chr5	protein_coding	PDS5 cohesin associated factor B
chr5	150720135	150724043	+	150720141	150724043	A5SS	0.5	50	50	ENSMUST00000202170.4	ENSMUSG00000034021.16	Pds5b	chr5	protein_coding	PDS5 cohesin associated factor B
chr5	150720135	150722737	+	150720135	150724043	A3SS	0.5	50	50	ENSMUST00000016569.11	ENSMUSG00000034021.16	Pds5b	chr5	protein_coding	PDS5 cohesin associated factor B
chr5	150987121	151016212	-	150987121;150996829	150996766;151016212	ES	0.5	50	50	ENSMUST00000110483.9	ENSMUSG00000016128.15	Stard13	chr5	protein_coding	StAR-related lipid transfer (START) domain containing 13
chr5	151018957	151157056	-	151018957	151113391	5pMXE	0.16	50	50	ENSMUST00000110483.9	ENSMUSG00000016128.15	Stard13	chr5	protein_coding	StAR-related lipid transfer (START) domain containing 13
chr5	151018957	151215221	-	151018957	151113391	5pMXE	0.16	50	50	ENSMUST00000110483.9	ENSMUSG00000016128.15	Stard13	chr5	protein_coding	StAR-related lipid transfer (START) domain containing 13
chr5	150983140	150984213	-	150983083	150984213	A3SS	0.5	50	50	ENSMUST00000110483.9	ENSMUSG00000016128.15	Stard13	chr5	protein_coding	StAR-related lipid transfer (START) domain containing 13
chr5	150996829	151012655	-	150996829	151016212	A5SS	0.5	50	50	ENSMUST00000110483.9	ENSMUSG00000016128.15	Stard13	chr5	protein_coding	StAR-related lipid transfer (START) domain containing 13
chr5	151018957	151019053	-	151018957	151113391	A5SS	0.16	50	50	ENSMUST00000110483.9	ENSMUSG00000016128.15	Stard13	chr5	protein_coding	StAR-related lipid transfer (START) domain containing 13
chr5	151018957	151032030	-	151018957	151113391	A5SS	0.16	50	50	ENSMUST00000110483.9	ENSMUSG00000016128.15	Stard13	chr5	protein_coding	StAR-related lipid transfer (START) domain containing 13
chr5	151018957	151050821	-	151018957	151113391	A5SS	0.16	50	50	ENSMUST00000110483.9	ENSMUSG00000016128.15	Stard13	chr5	protein_coding	StAR-related lipid transfer (START) domain containing 13
chr5	151018957	151157056	-	151018957	151050821	5pMXE	0.16	50	50	ENSMUST00000202111.4	ENSMUSG00000016128.15	Stard13	chr5	protein_coding	StAR-related lipid transfer (START) domain containing 13
chr5	151018957	151215221	-	151018957	151050821	5pMXE	0.16	50	50	ENSMUST00000202111.4	ENSMUSG00000016128.15	Stard13	chr5	protein_coding	StAR-related lipid transfer (START) domain containing 13
chr5	151018957	151019053	-	151018957	151050821	A5SS	0.16	50	50	ENSMUST00000202111.4	ENSMUSG00000016128.15	Stard13	chr5	protein_coding	StAR-related lipid transfer (START) domain containing 13
chr5	151018957	151032030	-	151018957	151050821	A5SS	0.16	50	50	ENSMUST00000202111.4	ENSMUSG00000016128.15	Stard13	chr5	protein_coding	StAR-related lipid transfer (START) domain containing 13
chr5	151018957	151215221	-	151018957	151157056	5pMXE	0.16	50	50	ENSMUST00000129088.8	ENSMUSG00000016128.15	Stard13	chr5	protein_coding	StAR-related lipid transfer (START) domain containing 13
chr5	151018957	151019053	-	151018957	151157056	A5SS	0.16	50	50	ENSMUST00000129088.8	ENSMUSG00000016128.15	Stard13	chr5	protein_coding	StAR-related lipid transfer (START) domain containing 13
chr5	151018957	151032030	-	151018957	151157056	A5SS	0.16	50	50	ENSMUST00000129088.8	ENSMUSG00000016128.15	Stard13	chr5	protein_coding	StAR-related lipid transfer (START) domain containing 13
chr5	151018957	151032030	-	151018957	151019053	5pMXE	0.16	50	50	ENSMUST00000141117.8	ENSMUSG00000016128.15	Stard13	chr5	protein_coding	StAR-related lipid transfer (START) domain containing 13
chr5	151018957	151215221	-	151018957	151019053	5pMXE	0.16	50	50	ENSMUST00000141117.8	ENSMUSG00000016128.15	Stard13	chr5	protein_coding	StAR-related lipid transfer (START) domain containing 13
chr5	150987121	151016212	-	150996829	151016212	3pMXE	0.5	50	50	ENSMUST00000146814.5	ENSMUSG00000016128.15	Stard13	chr5	protein_coding	StAR-related lipid transfer (START) domain containing 13
chr5	151018957	151215221	-	151018957	151032030	5pMXE	0.16	50	50	ENSMUST00000202866.2	ENSMUSG00000016128.15	Stard13	chr5	protein_coding	StAR-related lipid transfer (START) domain containing 13
chr5	151292635	151351584	-	151215254	151351584	A3SS	0.5	50	50	ENSMUST00000202365.2	ENSMUSG00000107011.2	Gm42906	chr5	protein_coding	predicted gene 42906
chr5	151331532	151351553	+	151331532	151337092	3pMXE	0.5	50	50	ENSMUST00000202024.4	ENSMUSG00000097321.6	1700028E10Rik	chr5	lncRNA	RIKEN cDNA 1700028E10 gene
chr5	151303988	151311927	+	151303988	151331340	A3SS	0.5	50	50	ENSMUST00000202024.4	ENSMUSG00000097321.6	1700028E10Rik	chr5	lncRNA	RIKEN cDNA 1700028E10 gene
chr5	151330082	151331340	+	151303988	151331340	A5SS	0.5	50	50	ENSMUST00000202024.4	ENSMUSG00000097321.6	1700028E10Rik	chr5	lncRNA	RIKEN cDNA 1700028E10 gene
chr5	151330082;151331532	151331340;151351553	+	151330082;151348046	151347978;151351553	MXE	0.5	100	100	ENSMUST00000201142.4	ENSMUSG00000097321.6	1700028E10Rik	chr5	lncRNA	RIKEN cDNA 1700028E10 gene
chr5	151496384	151508019	-	151496384;151499358	151499131;151508019	ES	0.33	50	50	ENSMUST00000233599.2	ENSMUSG00000091794.4	Vmn2r18	chr5	protein_coding	vomeronasal 2, receptor 18
chr5	151500858	151508019	-	151499358	151508019	A3SS	0.33	50	50	ENSMUST00000233599.2	ENSMUSG00000091794.4	Vmn2r18	chr5	protein_coding	vomeronasal 2, receptor 18
chr5	151509045	151510104	-	151508854	151510104	A3SS	0.5	50	50	ENSMUST00000233599.2	ENSMUSG00000091794.4	Vmn2r18	chr5	protein_coding	vomeronasal 2, receptor 18
chr5	151496384	151508019	-	151496384;151500858	151499131;151508019	ES	0.33	50	50	ENSMUST00000233687.2	ENSMUSG00000091794.4	Vmn2r18	chr5	protein_coding	vomeronasal 2, receptor 18
chr5	151500858	151508019	-	151496384	151508019	A3SS	0.33	50	50	ENSMUST00000232905.2	ENSMUSG00000091794.4	Vmn2r18	chr5	protein_coding	vomeronasal 2, receptor 18
chr6	3342159	3342596	-	3335888	3342596	A3SS	0.33	50	50	ENSMUST00000201831.4	ENSMUSG00000106734.4	Gm20559	chr6	lncRNA	predicted gene, 20559
chr6	3342297	3342596	-	3335888	3342596	A3SS	0.33	50	50	ENSMUST00000201831.4	ENSMUSG00000106734.4	Gm20559	chr6	lncRNA	predicted gene, 20559
chr6	3342297	3342596	-	3342159	3342596	A3SS	0.5	50	50	ENSMUST00000202696.4	ENSMUSG00000106734.4	Gm20559	chr6	lncRNA	predicted gene, 20559
chr6	3377281	3384910	-	3377281	3399268	A5SS	0.5	50	50	ENSMUST00000120087.6	ENSMUSG00000047735.15	Samd9l	chr6	protein_coding	sterile alpha motif domain containing 9-like
chr6	3467426	3467624	-	3467426;3467538	3467514;3467624	ES	0.5	50	50	ENSMUST00000049985.15	ENSMUSG00000044156.15	Hepacam2	chr6	protein_coding	HEPACAM family member 2
chr6	3487276	3498218	-	3487276	3494400	5pMXE	0.33	50	50	ENSMUST00000049985.15	ENSMUSG00000044156.15	Hepacam2	chr6	protein_coding	HEPACAM family member 2
chr6	3487276	3487403	-	3487276	3494400	A5SS	0.33	50	50	ENSMUST00000049985.15	ENSMUSG00000044156.15	Hepacam2	chr6	protein_coding	HEPACAM family member 2
chr6	3487276	3498218	-	3487276	3487403	5pMXE	0.33	50	50	ENSMUST00000201607.4	ENSMUSG00000044156.15	Hepacam2	chr6	protein_coding	HEPACAM family member 2
chr6	3594901	3600128	+	3594901;3598593	3598472;3600128	ES	0.5	50	50	ENSMUST00000001412.17	ENSMUSG00000001376.18	Vps50	chr6	protein_coding	VPS50 EARP/GARPII complex subunit
chr6	3532200	3532979	+	3532200	3533472	A3SS	0.5	50	50	ENSMUST00000001412.17	ENSMUSG00000001376.18	Vps50	chr6	protein_coding	VPS50 EARP/GARPII complex subunit
chr6	3600317	3601368	+	3600317	3602660	A3SS	0.5	50	50	ENSMUST00000001412.17	ENSMUSG00000001376.18	Vps50	chr6	protein_coding	VPS50 EARP/GARPII complex subunit
chr6	3570796	3571002	+	3567853	3571002	A5SS	0.5	50	50	ENSMUST00000001412.17	ENSMUSG00000001376.18	Vps50	chr6	protein_coding	VPS50 EARP/GARPII complex subunit
chr6	3763408	3764432	-	3763408	3763591	5pMXE	0.5	50	50	ENSMUST00000171613.8	ENSMUSG00000023964.16	Calcr	chr6	protein_coding	calcitonin receptor
chr6	3700280;3707599	3707489;3708486	-	3700280	3708486	cassetteExon	0.5	100	100	ENSMUST00000171613.8	ENSMUSG00000023964.16	Calcr	chr6	protein_coding	calcitonin receptor
chr6	3968050	3974531	-	3968050	3968237	5pMXE	0.33	50	50	ENSMUST00000031674.11	ENSMUSG00000029664.11	Tfpi2	chr6	protein_coding	tissue factor pathway inhibitor 2
chr6	3968050	3988823	-	3968050	3968237	5pMXE	0.33	50	50	ENSMUST00000031674.11	ENSMUSG00000029664.11	Tfpi2	chr6	protein_coding	tissue factor pathway inhibitor 2
chr6	3968050;3974650	3974531;3988823	-	3968050	3988823	cassetteExon	0.5	100	100	ENSMUST00000203257.2	ENSMUSG00000029664.11	Tfpi2	chr6	protein_coding	tissue factor pathway inhibitor 2
chr6	4080017	4086777	-	4080017;4082582	4082458;4086777	ES	0.5	50	50	ENSMUST00000049166.5	ENSMUSG00000032757.7	Bet1	chr6	protein_coding	Bet1 golgi vesicular membrane trafficking protein
chr6	4081632	4082458	-	4080017	4082458	A3SS	0.33	50	50	ENSMUST00000049166.5	ENSMUSG00000032757.7	Bet1	chr6	protein_coding	Bet1 golgi vesicular membrane trafficking protein
chr6	4081635	4082458	-	4080017	4082458	A3SS	0.33	50	50	ENSMUST00000049166.5	ENSMUSG00000032757.7	Bet1	chr6	protein_coding	Bet1 golgi vesicular membrane trafficking protein
chr6	4080017	4086777	-	4082582	4086777	3pMXE	0.5	50	50	ENSMUST00000150319.2	ENSMUSG00000032757.7	Bet1	chr6	protein_coding	Bet1 golgi vesicular membrane trafficking protein
chr6	4081632	4082458	-	4081635	4082458	A3SS	0.33	50	50	ENSMUST00000145696.4	ENSMUSG00000032757.7	Bet1	chr6	protein_coding	Bet1 golgi vesicular membrane trafficking protein
chr6	4619884	4624052	+	4619884;4621286	4621072;4624052	ES	0.5	50	50	ENSMUST00000015333.12	ENSMUSG00000015189.13	Casd1	chr6	protein_coding	CAS1 domain containing 1
chr6	4631598	4635746	+	4631598;4634103	4634002;4635746	ES	0.5	50	50	ENSMUST00000015333.12	ENSMUSG00000015189.13	Casd1	chr6	protein_coding	CAS1 domain containing 1
chr6	4601301;4605735	4605660;4607983	+	4601301	4607983	cassetteExon	0.5	100	100	ENSMUST00000015333.12	ENSMUSG00000015189.13	Casd1	chr6	protein_coding	CAS1 domain containing 1
chr6	4619884	4624052	+	4619884	4621072	3pMXE	0.5	50	50	ENSMUST00000141359.2	ENSMUSG00000015189.13	Casd1	chr6	protein_coding	CAS1 domain containing 1
chr6	4608754	4613235	+	4608754	4619289	A3SS	0.5	50	50	ENSMUST00000141359.2	ENSMUSG00000015189.13	Casd1	chr6	protein_coding	CAS1 domain containing 1
chr6	4614711	4619289	+	4608754	4619289	A5SS	0.5	50	50	ENSMUST00000141359.2	ENSMUSG00000015189.13	Casd1	chr6	protein_coding	CAS1 domain containing 1
chr6	4689767	4691429	-	4689767;4690495	4690469;4691429	ES	0.5	50	50	ENSMUST00000115577.9	ENSMUSG00000004631.16	Sgce	chr6	protein_coding	sarcoglycan, epsilon
chr6	4694184	4711308	-	4694184;4707272	4707074;4711308	ES	0.5	50	50	ENSMUST00000115577.9	ENSMUSG00000004631.16	Sgce	chr6	protein_coding	sarcoglycan, epsilon
chr6	4719496	4746980	-	4719496;4730113	4730006;4746980	ES	0.25	50	50	ENSMUST00000115577.9	ENSMUSG00000004631.16	Sgce	chr6	protein_coding	sarcoglycan, epsilon
chr6	4674632;4677197	4677163;4678067	-	4674632	4678067	cassetteExon	0.5	100	100	ENSMUST00000115577.9	ENSMUSG00000004631.16	Sgce	chr6	protein_coding	sarcoglycan, epsilon
chr6	4674632;4677233	4677163;4678067	-	4674632	4678067	cassetteExon	0.5	100	100	ENSMUST00000115577.9	ENSMUSG00000004631.16	Sgce	chr6	protein_coding	sarcoglycan, epsilon
chr6	4719496;4737392	4737298;4746980	-	4719496;4730113	4730006;4746980	MXE	0.5	100	100	ENSMUST00000115577.9	ENSMUSG00000004631.16	Sgce	chr6	protein_coding	sarcoglycan, epsilon
chr6	4718078	4746980	-	4718078;4719496	4719374;4746980	ES	0.25	50	50	ENSMUST00000115579.8	ENSMUSG00000004631.16	Sgce	chr6	protein_coding	sarcoglycan, epsilon
chr6	4719496;4737392	4737298;4746980	-	4719496	4746980	cassetteExon	0.5	100	100	ENSMUST00000115579.8	ENSMUSG00000004631.16	Sgce	chr6	protein_coding	sarcoglycan, epsilon
chr6	4730113	4746980	-	4718078	4746980	A3SS	0.25	50	50	ENSMUST00000126151.8	ENSMUSG00000004631.16	Sgce	chr6	protein_coding	sarcoglycan, epsilon
chr6	4737392	4746980	-	4718078	4746980	A3SS	0.25	50	50	ENSMUST00000126151.8	ENSMUSG00000004631.16	Sgce	chr6	protein_coding	sarcoglycan, epsilon
chr6	4677233	4678067	-	4677197	4678067	A3SS	0.33	50	50	ENSMUST00000004750.15	ENSMUSG00000004631.16	Sgce	chr6	protein_coding	sarcoglycan, epsilon
chr6	4807230	4811325	-	4807230	4807372	5pMXE	0.33	50	50	ENSMUST00000176811.4	ENSMUSG00000093570.4	Gm20714	chr6	lncRNA	predicted gene 20714
chr6	4807230	4812714	-	4807230	4807372	5pMXE	0.33	50	50	ENSMUST00000176811.4	ENSMUSG00000093570.4	Gm20714	chr6	lncRNA	predicted gene 20714
chr6	4807230	4812714	-	4807230;4811622	4811325;4812714	ES	0.5	50	50	ENSMUST00000176436.3	ENSMUSG00000093570.4	Gm20714	chr6	lncRNA	predicted gene 20714
chr6	5156240	5158089	+	5156240;5157027	5157004;5158089	ES	0.5	50	50	ENSMUST00000175889.8	ENSMUSG00000032827.16	Ppp1r9a	chr6	protein_coding	protein phosphatase 1, regulatory subunit 9A
chr6	5057578;5062192	5062118;5063991	+	5057578	5063991	cassetteExon	0.5	100	100	ENSMUST00000175889.8	ENSMUSG00000032827.16	Ppp1r9a	chr6	protein_coding	protein phosphatase 1, regulatory subunit 9A
chr6	5077615;5083106	5083041;5100432	+	5077615	5100432	cassetteExon	0.5	100	100	ENSMUST00000175889.8	ENSMUSG00000032827.16	Ppp1r9a	chr6	protein_coding	protein phosphatase 1, regulatory subunit 9A
chr6	4906844	5007694	+	4906844	5045936	A3SS	0.5	50	50	ENSMUST00000175889.8	ENSMUSG00000032827.16	Ppp1r9a	chr6	protein_coding	protein phosphatase 1, regulatory subunit 9A
chr6	5077615	5077698	+	5077615	5100432	A3SS	0.33	50	50	ENSMUST00000175889.8	ENSMUSG00000032827.16	Ppp1r9a	chr6	protein_coding	protein phosphatase 1, regulatory subunit 9A
chr6	5115480	5116265	+	5115480	5134017	A3SS	0.5	50	50	ENSMUST00000175889.8	ENSMUSG00000032827.16	Ppp1r9a	chr6	protein_coding	protein phosphatase 1, regulatory subunit 9A
chr6	5134174	5134639	+	5134174	5156121	A3SS	0.33	50	50	ENSMUST00000175889.8	ENSMUSG00000032827.16	Ppp1r9a	chr6	protein_coding	protein phosphatase 1, regulatory subunit 9A
chr6	5134174	5134689	+	5134174	5156121	A3SS	0.33	50	50	ENSMUST00000175889.8	ENSMUSG00000032827.16	Ppp1r9a	chr6	protein_coding	protein phosphatase 1, regulatory subunit 9A
chr6	4903448	4905226	+	4903031	4905226	A5SS	0.33	50	50	ENSMUST00000175889.8	ENSMUSG00000032827.16	Ppp1r9a	chr6	protein_coding	protein phosphatase 1, regulatory subunit 9A
chr6	4903905	4905226	+	4903031	4905226	A5SS	0.33	50	50	ENSMUST00000175889.8	ENSMUSG00000032827.16	Ppp1r9a	chr6	protein_coding	protein phosphatase 1, regulatory subunit 9A
chr6	5110774	5111000	+	5100587	5111000	A5SS	0.5	50	50	ENSMUST00000175889.8	ENSMUSG00000032827.16	Ppp1r9a	chr6	protein_coding	protein phosphatase 1, regulatory subunit 9A
chr6	5154207	5156121	+	5134174	5156121	A5SS	0.33	50	50	ENSMUST00000175889.8	ENSMUSG00000032827.16	Ppp1r9a	chr6	protein_coding	protein phosphatase 1, regulatory subunit 9A
chr6	5154318	5156121	+	5134174	5156121	A5SS	0.33	50	50	ENSMUST00000175889.8	ENSMUSG00000032827.16	Ppp1r9a	chr6	protein_coding	protein phosphatase 1, regulatory subunit 9A
chr6	5077615	5083041	+	5077615	5077698	3pMXE	0.33	50	50	ENSMUST00000168998.9	ENSMUSG00000032827.16	Ppp1r9a	chr6	protein_coding	protein phosphatase 1, regulatory subunit 9A
chr6	5156240	5159552	+	5156240;5158271	5158089;5159552	ES	0.5	50	50	ENSMUST00000176263.8	ENSMUSG00000032827.16	Ppp1r9a	chr6	protein_coding	protein phosphatase 1, regulatory subunit 9A
chr6	5134174	5134689	+	5134174	5134639	A3SS	0.33	50	50	ENSMUST00000176263.8	ENSMUSG00000032827.16	Ppp1r9a	chr6	protein_coding	protein phosphatase 1, regulatory subunit 9A
chr6	5154207	5156121	+	5154318	5156121	A5SS	0.33	50	50	ENSMUST00000176263.8	ENSMUSG00000032827.16	Ppp1r9a	chr6	protein_coding	protein phosphatase 1, regulatory subunit 9A
chr6	4903905	4905226	+	4903448	4905226	A5SS	0.33	50	50	ENSMUST00000035813.9	ENSMUSG00000032827.16	Ppp1r9a	chr6	protein_coding	protein phosphatase 1, regulatory subunit 9A
chr6	5156240	5157004	+	5156240	5159552	A3SS	0.33	50	50	ENSMUST00000177153.8	ENSMUSG00000032827.16	Ppp1r9a	chr6	protein_coding	protein phosphatase 1, regulatory subunit 9A
chr6	5175823	5181439	-	5175823;5177410	5177210;5181439	ES	0.33	50	50	ENSMUST00000002663.12	ENSMUSG00000002588.14	Pon1	chr6	protein_coding	paraoxonase 1
chr6	5171869	5181439	-	5171869;5175823	5175742;5181439	ES	0.33	50	50	ENSMUST00000177159.9	ENSMUSG00000002588.14	Pon1	chr6	protein_coding	paraoxonase 1
chr6	5177410	5181439	-	5171869	5181439	A3SS	0.33	50	50	ENSMUST00000176945.2	ENSMUSG00000002588.14	Pon1	chr6	protein_coding	paraoxonase 1
chr6	5246333	5256153	-	5246333;5254586	5254516;5256153	ES	0.5	50	50	ENSMUST00000129344.8	ENSMUSG00000029759.10	Pon3	chr6	protein_coding	paraoxonase 3
chr6	5240978	5246278	-	5240978	5246048	A5SS	0.5	50	50	ENSMUST00000129344.8	ENSMUSG00000029759.10	Pon3	chr6	protein_coding	paraoxonase 3
chr6	5254586	5254969	-	5254586	5256153	A5SS	0.5	50	50	ENSMUST00000129344.8	ENSMUSG00000029759.10	Pon3	chr6	protein_coding	paraoxonase 3
chr6	5246333	5256153	-	5246333	5254516	5pMXE	0.5	50	50	ENSMUST00000176948.3	ENSMUSG00000029759.10	Pon3	chr6	protein_coding	paraoxonase 3
chr6	5277927;5278812	5278719;5289013	-	5277927	5289013	cassetteExon	0.5	100	100	ENSMUST00000057792.9	ENSMUSG00000032667.18	Pon2	chr6	protein_coding	paraoxonase 2
chr6	5398523	5399130	+	5398523	5423342	A3SS	0.5	50	50	ENSMUST00000043294.12	ENSMUSG00000042607.16	Asb4	chr6	protein_coding	ankyrin repeat and SOCS box-containing 4
chr6	5495031	5496175	-	5495031	5496033	A5SS	0.5	50	50	ENSMUST00000019721.7	ENSMUSG00000019577.7	Pdk4	chr6	protein_coding	pyruvate dehydrogenase kinase, isoenzyme 4
chr6	5769791	5800775	+	5769791;5784498	5784439;5800775	ES	0.5	50	50	ENSMUST00000115556.8	ENSMUSG00000029757.17	Dync1i1	chr6	protein_coding	dynein cytoplasmic 1 intermediate chain 1
chr6	5725936;5730701	5730536;5757378	+	5725936	5757378	cassetteExon	0.5	100	100	ENSMUST00000115556.8	ENSMUSG00000029757.17	Dync1i1	chr6	protein_coding	dynein cytoplasmic 1 intermediate chain 1
chr6	5767144	5769650	+	5767144	5769734	A3SS	0.33	50	50	ENSMUST00000115556.8	ENSMUSG00000029757.17	Dync1i1	chr6	protein_coding	dynein cytoplasmic 1 intermediate chain 1
chr6	5767144	5769701	+	5767144	5769734	A3SS	0.33	50	50	ENSMUST00000115556.8	ENSMUSG00000029757.17	Dync1i1	chr6	protein_coding	dynein cytoplasmic 1 intermediate chain 1
chr6	5767144	5769701	+	5767144	5769650	A3SS	0.33	50	50	ENSMUST00000115555.8	ENSMUSG00000029757.17	Dync1i1	chr6	protein_coding	dynein cytoplasmic 1 intermediate chain 1
chr6	5769791	5800775	+	5769791	5784439	3pMXE	0.5	50	50	ENSMUST00000204149.2	ENSMUSG00000029757.17	Dync1i1	chr6	protein_coding	dynein cytoplasmic 1 intermediate chain 1
chr6	6117245	6152408	-	6117245;6131768	6131629;6152408	ES	0.5	50	50	ENSMUST00000015256.15	ENSMUSG00000015112.16	Slc25a13	chr6	protein_coding	solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13
chr6	6068699	6073402	-	6052903	6073402	A3SS	0.5	50	50	ENSMUST00000015256.15	ENSMUSG00000015112.16	Slc25a13	chr6	protein_coding	solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13
chr6	6152523	6173872	-	6152523	6180971	A5SS	0.5	50	50	ENSMUST00000015256.15	ENSMUSG00000015112.16	Slc25a13	chr6	protein_coding	solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13
chr6	6117245	6152408	-	6131768	6152408	3pMXE	0.5	50	50	ENSMUST00000177698.4	ENSMUSG00000015112.16	Slc25a13	chr6	protein_coding	solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13
chr6	6248777	6280437	+	6248777	6315208	A3SS	0.5	50	50	ENSMUST00000176283.8	ENSMUSG00000093482.9	Gm20619	chr6	lncRNA	predicted gene 20619
chr6	6315927	6362450	+	6315927	6362334	A3SS	0.5	50	50	ENSMUST00000176283.8	ENSMUSG00000093482.9	Gm20619	chr6	lncRNA	predicted gene 20619
chr6	6299533	6315208	+	6248777	6315208	A5SS	0.5	50	50	ENSMUST00000176283.8	ENSMUSG00000093482.9	Gm20619	chr6	lncRNA	predicted gene 20619
chr6	6315927	6362334	+	6315927	6376959	A3SS	0.33	50	50	ENSMUST00000175814.8	ENSMUSG00000093482.9	Gm20619	chr6	lncRNA	predicted gene 20619
chr6	6315927	6362450	+	6315927	6376959	A3SS	0.33	50	50	ENSMUST00000175814.8	ENSMUSG00000093482.9	Gm20619	chr6	lncRNA	predicted gene 20619
chr6	6456845;6465127	6464931;6484221	-	6456845	6484221	cassetteExon	0.5	100	100	ENSMUST00000177332.2	ENSMUSG00000093658.2	Gm20617	chr6	lncRNA	predicted gene 20617
chr6	6682081	6690621	-	6682081	6684642	5pMXE	0.5	50	50	ENSMUST00000177482.8	ENSMUSG00000093675.8	Gm20618	chr6	lncRNA	predicted gene 20618
chr6	6824567	6869309	-	6824567	6861525	5pMXE	0.33	50	50	ENSMUST00000159827.3	ENSMUSG00000090063.7	Dlx6os1	chr6	lncRNA	distal-less homeobox 6, opposite strand 1
chr6	6824567	6830648	-	6824567	6861525	A5SS	0.33	50	50	ENSMUST00000159827.3	ENSMUSG00000090063.7	Dlx6os1	chr6	lncRNA	distal-less homeobox 6, opposite strand 1
chr6	6824567	6830648	-	6824567	6869309	A5SS	0.33	50	50	ENSMUST00000159568.6	ENSMUSG00000090063.7	Dlx6os1	chr6	lncRNA	distal-less homeobox 6, opposite strand 1
chr6	6879710	6881532	-	6879628	6881532	A3SS	0.5	50	50	ENSMUST00000142635.2	ENSMUSG00000029755.11	Dlx5	chr6	protein_coding	distal-less homeobox 5
chr6	6956200	6957004	+	6956200	7038854	A3SS	0.5	50	50	ENSMUST00000040826.6	ENSMUSG00000042505.7	Sdhaf3	chr6	protein_coding	succinate dehydrogenase complex assembly factor 3
chr6	7303439	7308156	+	7303439	7304698	3pMXE	0.5	50	50	ENSMUST00000185181.8	ENSMUSG00000098501.8	Gm19272	chr6	lncRNA	predicted gene, 19272
chr6	7556780	7557720	+	7556780;7557260	7557216;7557720	ES	0.5	50	50	ENSMUST00000185187.8	ENSMUSG00000061762.13	Tac1	chr6	protein_coding	tachykinin 1
chr6	7557743	7562383	+	7557743;7559152	7559099;7562383	ES	0.5	50	50	ENSMUST00000185187.8	ENSMUSG00000061762.13	Tac1	chr6	protein_coding	tachykinin 1
chr6	7556387	7556684	+	7555736	7556684	A5SS	0.5	50	50	ENSMUST00000185187.8	ENSMUSG00000061762.13	Tac1	chr6	protein_coding	tachykinin 1
chr6	7557743	7562383	+	7557743	7559099	3pMXE	0.5	50	50	ENSMUST00000185130.2	ENSMUSG00000061762.13	Tac1	chr6	protein_coding	tachykinin 1
chr6	7689523	7692897	-	7689523	7692711	5pMXE	0.2	50	50	ENSMUST00000115542.8	ENSMUSG00000029752.13	Asns	chr6	protein_coding	asparagine synthetase
chr6	7689523	7693109	-	7689523	7692711	5pMXE	0.2	50	50	ENSMUST00000115542.8	ENSMUSG00000029752.13	Asns	chr6	protein_coding	asparagine synthetase
chr6	7689523	7692152	-	7689523	7692711	A5SS	0.2	50	50	ENSMUST00000115542.8	ENSMUSG00000029752.13	Asns	chr6	protein_coding	asparagine synthetase
chr6	7689523	7692847	-	7689523	7692711	A5SS	0.2	50	50	ENSMUST00000115542.8	ENSMUSG00000029752.13	Asns	chr6	protein_coding	asparagine synthetase
chr6	7689523	7692152	-	7689523	7693109	A5SS	0.2	50	50	ENSMUST00000031766.12	ENSMUSG00000029752.13	Asns	chr6	protein_coding	asparagine synthetase
chr6	7689523	7692847	-	7689523	7693109	A5SS	0.2	50	50	ENSMUST00000031766.12	ENSMUSG00000029752.13	Asns	chr6	protein_coding	asparagine synthetase
chr6	7689523	7692897	-	7689523	7693109	A5SS	0.2	50	50	ENSMUST00000031766.12	ENSMUSG00000029752.13	Asns	chr6	protein_coding	asparagine synthetase
chr6	7689523	7692152	-	7689523	7692897	A5SS	0.2	50	50	ENSMUST00000126303.8	ENSMUSG00000029752.13	Asns	chr6	protein_coding	asparagine synthetase
chr6	7689523	7692847	-	7689523	7692897	A5SS	0.2	50	50	ENSMUST00000126303.8	ENSMUSG00000029752.13	Asns	chr6	protein_coding	asparagine synthetase
chr6	7689523	7692847	-	7689523	7692152	5pMXE	0.2	50	50	ENSMUST00000139596.8	ENSMUSG00000029752.13	Asns	chr6	protein_coding	asparagine synthetase
chr6	8022123	8022737	-	8022123;8022300	8022220;8022737	ES	0.5	50	50	ENSMUST00000115537.2	ENSMUSG00000068794.8	Col28a1	chr6	protein_coding	collagen, type XXVIII, alpha 1
chr6	8021437	8022088	-	8017068	8022088	A3SS	0.5	50	50	ENSMUST00000115537.2	ENSMUSG00000068794.8	Col28a1	chr6	protein_coding	collagen, type XXVIII, alpha 1
chr6	8176392	8180165	-	8176392	8192525	A5SS	0.5	50	50	ENSMUST00000115537.2	ENSMUSG00000068794.8	Col28a1	chr6	protein_coding	collagen, type XXVIII, alpha 1
chr6	8270581	8426971	+	8270581;8373967	8373906;8426971	ES	0.25	50	50	ENSMUST00000159335.8	ENSMUSG00000089862.9	Umad1	chr6	protein_coding	UMAP1-MVP12 associated (UMA) domain containing 1
chr6	8427185	8537817	+	8427185	8457448	3pMXE	0.5	50	50	ENSMUST00000159335.8	ENSMUSG00000089862.9	Umad1	chr6	protein_coding	UMAP1-MVP12 associated (UMA) domain containing 1
chr6	8373967;8401154	8401077;8426971	+	8373967	8426971	cassetteExon	0.5	100	100	ENSMUST00000159335.8	ENSMUSG00000089862.9	Umad1	chr6	protein_coding	UMAP1-MVP12 associated (UMA) domain containing 1
chr6	8270581	8279277	+	8270581	8373906	A3SS	0.33	50	50	ENSMUST00000159335.8	ENSMUSG00000089862.9	Umad1	chr6	protein_coding	UMAP1-MVP12 associated (UMA) domain containing 1
chr6	8259439	8270473	+	8259493	8270473	A5SS	0.5	50	50	ENSMUST00000159335.8	ENSMUSG00000089862.9	Umad1	chr6	protein_coding	UMAP1-MVP12 associated (UMA) domain containing 1
chr6	8420137	8426971	+	8373967	8426971	A5SS	0.25	50	50	ENSMUST00000159335.8	ENSMUSG00000089862.9	Umad1	chr6	protein_coding	UMAP1-MVP12 associated (UMA) domain containing 1
chr6	8270581	8279277	+	8270581	8426971	A3SS	0.33	50	50	ENSMUST00000162034.8	ENSMUSG00000089862.9	Umad1	chr6	protein_coding	UMAP1-MVP12 associated (UMA) domain containing 1
chr6	8401154	8426971	+	8270581	8426971	A5SS	0.25	50	50	ENSMUST00000162034.8	ENSMUSG00000089862.9	Umad1	chr6	protein_coding	UMAP1-MVP12 associated (UMA) domain containing 1
chr6	8420137	8426971	+	8270581	8426971	A5SS	0.25	50	50	ENSMUST00000162034.8	ENSMUSG00000089862.9	Umad1	chr6	protein_coding	UMAP1-MVP12 associated (UMA) domain containing 1
chr6	8420137	8426971	+	8401154	8426971	A5SS	0.25	50	50	ENSMUST00000160705.8	ENSMUSG00000089862.9	Umad1	chr6	protein_coding	UMAP1-MVP12 associated (UMA) domain containing 1
chr6	8579739;8580206	8580101;8582580	+	8579739	8582580	cassetteExon	0.5	100	100	ENSMUST00000162564.7	ENSMUSG00000107705.2	Gm45062	chr6	protein_coding	predicted gene 45062
chr6	8558586	8573182	+	8558586	8573185	A3SS	0.5	50	50	ENSMUST00000162564.7	ENSMUSG00000107705.2	Gm45062	chr6	protein_coding	predicted gene 45062
chr6	8510319	8537817	+	8427185	8537817	A5SS	0.25	50	50	ENSMUST00000162564.7	ENSMUSG00000107705.2	Gm45062	chr6	protein_coding	predicted gene 45062
chr6	8511349	8537817	+	8427185	8537817	A5SS	0.25	50	50	ENSMUST00000162564.7	ENSMUSG00000107705.2	Gm45062	chr6	protein_coding	predicted gene 45062
chr6	8520101	8537817	+	8427185	8537817	A5SS	0.25	50	50	ENSMUST00000162564.7	ENSMUSG00000107705.2	Gm45062	chr6	protein_coding	predicted gene 45062
chr6	8491269	8492730	-	8490582	8492730	A3SS	0.5	50	50	ENSMUST00000148063.8	ENSMUSG00000087305.9	A430035B10Rik	chr6	lncRNA	RIKEN cDNA A430035B10 gene
chr6	8492804	8497408	-	8492804	8510284	A5SS	0.5	50	50	ENSMUST00000148063.8	ENSMUSG00000087305.9	A430035B10Rik	chr6	lncRNA	RIKEN cDNA A430035B10 gene
chr6	8497560	8508979	-	8497560;8498945	8498855;8508979	ES	0.33	50	50	ENSMUST00000161307.8	ENSMUSG00000087305.9	A430035B10Rik	chr6	lncRNA	RIKEN cDNA A430035B10 gene
chr6	8508811	8508979	-	8498945	8508979	A3SS	0.33	50	50	ENSMUST00000161307.8	ENSMUSG00000087305.9	A430035B10Rik	chr6	lncRNA	RIKEN cDNA A430035B10 gene
chr6	8508811	8508979	-	8497560	8508979	A3SS	0.33	50	50	ENSMUST00000123581.3	ENSMUSG00000087305.9	A430035B10Rik	chr6	lncRNA	RIKEN cDNA A430035B10 gene
chr6	8511349	8537817	+	8510319	8537817	A5SS	0.25	50	50	ENSMUST00000064285.15	ENSMUSG00000029638.18	Glcci1	chr6	protein_coding	glucocorticoid induced transcript 1
chr6	8520101	8537817	+	8510319	8537817	A5SS	0.25	50	50	ENSMUST00000064285.15	ENSMUSG00000029638.18	Glcci1	chr6	protein_coding	glucocorticoid induced transcript 1
chr6	8520101	8537817	+	8511349	8537817	A5SS	0.25	50	50	ENSMUST00000162383.8	ENSMUSG00000029638.18	Glcci1	chr6	protein_coding	glucocorticoid induced transcript 1
chr6	8656408	8658220	-	8653535	8658220	A3SS	0.5	50	50	ENSMUST00000156695.8	ENSMUSG00000062995.13	Ica1	chr6	protein_coding	islet cell autoantigen 1
chr6	8659097	8670694	-	8658314	8670694	A3SS	0.25	50	50	ENSMUST00000156695.8	ENSMUSG00000062995.13	Ica1	chr6	protein_coding	islet cell autoantigen 1
chr6	8659988	8670694	-	8658314	8670694	A3SS	0.25	50	50	ENSMUST00000156695.8	ENSMUSG00000062995.13	Ica1	chr6	protein_coding	islet cell autoantigen 1
chr6	8667363	8670694	-	8658314	8670694	A3SS	0.25	50	50	ENSMUST00000156695.8	ENSMUSG00000062995.13	Ica1	chr6	protein_coding	islet cell autoantigen 1
chr6	8730631	8737017	-	8672423	8737017	A3SS	0.5	50	50	ENSMUST00000156695.8	ENSMUSG00000062995.13	Ica1	chr6	protein_coding	islet cell autoantigen 1
chr6	8644242	8647719	-	8644242	8653497	A5SS	0.33	50	50	ENSMUST00000156695.8	ENSMUSG00000062995.13	Ica1	chr6	protein_coding	islet cell autoantigen 1
chr6	8644242	8653630	-	8644242	8653497	A5SS&ES	0.33	50	50	ENSMUST00000156695.8	ENSMUSG00000062995.13	Ica1	chr6	protein_coding	islet cell autoantigen 1
chr6	8653535	8653630	-	8653535	8658220	A5SS	0.5	50	50	ENSMUST00000156695.8	ENSMUSG00000062995.13	Ica1	chr6	protein_coding	islet cell autoantigen 1
chr6	8758458	8778373	-	8758458	8778072	5pMXE	0.2	50	50	ENSMUST00000115519.8	ENSMUSG00000062995.13	Ica1	chr6	protein_coding	islet cell autoantigen 1
chr6	8644242;8653535	8653497;8653630	-	8644242	8653630	cassetteExon	0.5	100	100	ENSMUST00000115519.8	ENSMUSG00000062995.13	Ica1	chr6	protein_coding	islet cell autoantigen 1
chr6	8644242;8653535	8653497;8658220	-	8644242;8656408	8653630;8658220	MXE	0.5	100	100	ENSMUST00000115519.8	ENSMUSG00000062995.13	Ica1	chr6	protein_coding	islet cell autoantigen 1
chr6	8758458;8775930	8775784;8778072	-	8758458	8778072	cassetteExon	0.5	100	100	ENSMUST00000115519.8	ENSMUSG00000062995.13	Ica1	chr6	protein_coding	islet cell autoantigen 1
chr6	8758458;8777224	8777047;8778072	-	8758458	8778072	cassetteExon	0.5	100	100	ENSMUST00000115519.8	ENSMUSG00000062995.13	Ica1	chr6	protein_coding	islet cell autoantigen 1
chr6	8644242	8647719	-	8644242	8653630	A5SS	0.33	50	50	ENSMUST00000115519.8	ENSMUSG00000062995.13	Ica1	chr6	protein_coding	islet cell autoantigen 1
chr6	8758458	8770432	-	8758458	8778072	A5SS	0.2	50	50	ENSMUST00000115519.8	ENSMUSG00000062995.13	Ica1	chr6	protein_coding	islet cell autoantigen 1
chr6	8758458	8778373	-	8758458;8775930	8775784;8778373	ES	0.5	50	50	ENSMUST00000115520.8	ENSMUSG00000062995.13	Ica1	chr6	protein_coding	islet cell autoantigen 1
chr6	8758458	8770432	-	8758458	8775784	A5SS	0.2	50	50	ENSMUST00000115520.8	ENSMUSG00000062995.13	Ica1	chr6	protein_coding	islet cell autoantigen 1
chr6	8758458	8777047	-	8758458	8775784	A5SS&ES	0.2	50	50	ENSMUST00000115520.8	ENSMUSG00000062995.13	Ica1	chr6	protein_coding	islet cell autoantigen 1
chr6	8758458	8778072	-	8758458	8775784	A5SS&ES	0.2	50	50	ENSMUST00000115520.8	ENSMUSG00000062995.13	Ica1	chr6	protein_coding	islet cell autoantigen 1
chr6	8775930	8778072	-	8775930	8778373	A5SS	0.5	50	50	ENSMUST00000115520.8	ENSMUSG00000062995.13	Ica1	chr6	protein_coding	islet cell autoantigen 1
chr6	8758458;8777224	8777047;8778072	-	8758458;8775930	8775784;8778072	MXE	0.5	100	100	ENSMUST00000153390.8	ENSMUSG00000062995.13	Ica1	chr6	protein_coding	islet cell autoantigen 1
chr6	8659097;8659988	8659826;8670694	-	8659097	8670694	cassetteExon	0.5	100	100	ENSMUST00000127398.8	ENSMUSG00000062995.13	Ica1	chr6	protein_coding	islet cell autoantigen 1
chr6	8659097;8667363	8667197;8670694	-	8659097	8670694	cassetteExon	0.5	100	100	ENSMUST00000127398.8	ENSMUSG00000062995.13	Ica1	chr6	protein_coding	islet cell autoantigen 1
chr6	8659097;8659988	8659826;8670694	-	8659097;8667363	8667197;8670694	MXE	0.5	100	100	ENSMUST00000115518.8	ENSMUSG00000062995.13	Ica1	chr6	protein_coding	islet cell autoantigen 1
chr6	8758458	8770432	-	8758458	8778373	A5SS	0.2	50	50	ENSMUST00000115518.8	ENSMUSG00000062995.13	Ica1	chr6	protein_coding	islet cell autoantigen 1
chr6	8758458	8777047	-	8758458	8778373	A5SS	0.2	50	50	ENSMUST00000115518.8	ENSMUSG00000062995.13	Ica1	chr6	protein_coding	islet cell autoantigen 1
chr6	8758458	8777047	-	8758458	8770432	5pMXE	0.2	50	50	ENSMUST00000126039.8	ENSMUSG00000062995.13	Ica1	chr6	protein_coding	islet cell autoantigen 1
chr6	8950307	9247085	+	8950307	8951144	3pMXE	0.5	50	50	ENSMUST00000162942.2	ENSMUSG00000046178.4	Nxph1	chr6	protein_coding	neurexophilin 1
chr6	10973632	10979458	-	10973632;10977905	10977859;10979458	ES	0.5	50	50	ENSMUST00000203495.3	ENSMUSG00000107948.3	AA545190	chr6	lncRNA	EST AA545190
chr6	10973632	10974261	-	10973632	10977859	A5SS	0.33	50	50	ENSMUST00000203495.3	ENSMUSG00000107948.3	AA545190	chr6	lncRNA	EST AA545190
chr6	10973632	10974261	-	10973632	10979458	A5SS	0.33	50	50	ENSMUST00000204434.3	ENSMUSG00000107948.3	AA545190	chr6	lncRNA	EST AA545190
chr6	11906076	11907323	-	11906107	11907323	A3SS	0.33	50	50	ENSMUST00000204978.3	ENSMUSG00000029632.8	Ndufa4	chr6	protein_coding	Ndufa4, mitochondrial complex associated
chr6	11906079	11907323	-	11906107	11907323	A3SS	0.33	50	50	ENSMUST00000204978.3	ENSMUSG00000029632.8	Ndufa4	chr6	protein_coding	Ndufa4, mitochondrial complex associated
chr6	11906079	11907323	-	11906076	11907323	A3SS	0.33	50	50	ENSMUST00000204084.3	ENSMUSG00000029632.8	Ndufa4	chr6	protein_coding	Ndufa4, mitochondrial complex associated
chr6	11926836	11941429	+	11926836	11933252	3pMXE	0.5	50	50	ENSMUST00000155037.4	ENSMUSG00000029629.18	Phf14	chr6	protein_coding	PHD finger protein 14
chr6	11926291	11926726	+	11908016	11926726	A5SS	0.5	50	50	ENSMUST00000155037.4	ENSMUSG00000029629.18	Phf14	chr6	protein_coding	PHD finger protein 14
chr6	11934018	11941429	+	11926836	11941429	A5SS	0.5	50	50	ENSMUST00000203459.3	ENSMUSG00000029629.18	Phf14	chr6	protein_coding	PHD finger protein 14
chr6	11926836	11941429	+	11926836;11934018	11933252;11941429	ES	0.5	50	50	ENSMUST00000115510.8	ENSMUSG00000029629.18	Phf14	chr6	protein_coding	PHD finger protein 14
chr6	12007105	12045584	+	12007105	12007704	3pMXE	0.33	50	50	ENSMUST00000115510.8	ENSMUSG00000029629.18	Phf14	chr6	protein_coding	PHD finger protein 14
chr6	12007105	12047826	+	12007105	12007704	3pMXE	0.33	50	50	ENSMUST00000115510.8	ENSMUSG00000029629.18	Phf14	chr6	protein_coding	PHD finger protein 14
chr6	12007105;12045763	12045584;12047826	+	12007105	12047826	cassetteExon	0.5	100	100	ENSMUST00000115511.9	ENSMUSG00000029629.18	Phf14	chr6	protein_coding	PHD finger protein 14
chr6	12047153	12047826	+	12007105	12047826	A5SS	0.33	50	50	ENSMUST00000115511.9	ENSMUSG00000029629.18	Phf14	chr6	protein_coding	PHD finger protein 14
chr6	12047153	12047826	+	12045763	12047826	A5SS	0.33	50	50	ENSMUST00000203045.2	ENSMUSG00000029629.18	Phf14	chr6	protein_coding	PHD finger protein 14
chr6	12348329;12349714	12349709;12351984	-	12348329;12351616	12351611;12351984	MXE	0.5	100	100	ENSMUST00000172356.8	ENSMUSG00000032625.15	Thsd7a	chr6	protein_coding	thrombospondin, type I, domain containing 7A
chr6	12467453	12468788	-	12418438	12468788	A3SS	0.5	50	50	ENSMUST00000172356.8	ENSMUSG00000032625.15	Thsd7a	chr6	protein_coding	thrombospondin, type I, domain containing 7A
chr6	12418438	12419194	-	12418438	12468788	A5SS	0.5	50	50	ENSMUST00000172356.8	ENSMUSG00000032625.15	Thsd7a	chr6	protein_coding	thrombospondin, type I, domain containing 7A
chr6	13069959	13070307	+	13069794	13070307	A5SS	0.33	50	50	ENSMUST00000124234.8	ENSMUSG00000029571.15	Tmem106b	chr6	protein_coding	transmembrane protein 106B
chr6	13070002	13070307	+	13069794	13070307	A5SS	0.33	50	50	ENSMUST00000124234.8	ENSMUSG00000029571.15	Tmem106b	chr6	protein_coding	transmembrane protein 106B
chr6	13069959	13070307	+	13070002	13070307	A5SS	0.33	50	50	ENSMUST00000142211.8	ENSMUSG00000029571.15	Tmem106b	chr6	protein_coding	transmembrane protein 106B
chr6	13075098	13075887	+	13075098	13078091	A3SS	0.5	50	50	ENSMUST00000031556.14	ENSMUSG00000029571.15	Tmem106b	chr6	protein_coding	transmembrane protein 106B
chr6	13595085	13607829	-	13595085;13603486	13602237;13607829	ES	0.16	50	50	ENSMUST00000031554.9	ENSMUSG00000029569.10	Tmem168	chr6	protein_coding	transmembrane protein 168
chr6	13603486;13605958	13605786;13607829	-	13603486	13607829	cassetteExon	0.5	100	100	ENSMUST00000031554.9	ENSMUSG00000029569.10	Tmem168	chr6	protein_coding	transmembrane protein 168
chr6	13603486;13607576	13607500;13607829	-	13603486	13607829	cassetteExon	0.5	100	100	ENSMUST00000031554.9	ENSMUSG00000029569.10	Tmem168	chr6	protein_coding	transmembrane protein 168
chr6	13607083	13607829	-	13603486	13607829	A3SS	0.16	50	50	ENSMUST00000031554.9	ENSMUSG00000029569.10	Tmem168	chr6	protein_coding	transmembrane protein 168
chr6	13607414	13607829	-	13603486	13607829	A3SS	0.16	50	50	ENSMUST00000031554.9	ENSMUSG00000029569.10	Tmem168	chr6	protein_coding	transmembrane protein 168
chr6	13603486	13607829	-	13595085	13607829	A3SS	0.16	50	50	ENSMUST00000149123.3	ENSMUSG00000029569.10	Tmem168	chr6	protein_coding	transmembrane protein 168
chr6	13605958	13607829	-	13595085	13607829	A3SS	0.16	50	50	ENSMUST00000149123.3	ENSMUSG00000029569.10	Tmem168	chr6	protein_coding	transmembrane protein 168
chr6	13607083	13607829	-	13595085	13607829	A3SS	0.16	50	50	ENSMUST00000149123.3	ENSMUSG00000029569.10	Tmem168	chr6	protein_coding	transmembrane protein 168
chr6	13607414	13607829	-	13595085	13607829	A3SS	0.16	50	50	ENSMUST00000149123.3	ENSMUSG00000029569.10	Tmem168	chr6	protein_coding	transmembrane protein 168
chr6	13607576	13607829	-	13595085	13607829	A3SS	0.16	50	50	ENSMUST00000149123.3	ENSMUSG00000029569.10	Tmem168	chr6	protein_coding	transmembrane protein 168
chr6	13595085	13602237	-	13595085	13607829	A5SS	0.5	50	50	ENSMUST00000149123.3	ENSMUSG00000029569.10	Tmem168	chr6	protein_coding	transmembrane protein 168
chr6	13603486	13607829	-	13603486	13607500	5pMXE	0.33	50	50	ENSMUST00000127050.2	ENSMUSG00000029569.10	Tmem168	chr6	protein_coding	transmembrane protein 168
chr6	13607414	13607500	-	13603486	13607500	A3SS	0.5	50	50	ENSMUST00000127050.2	ENSMUSG00000029569.10	Tmem168	chr6	protein_coding	transmembrane protein 168
chr6	13603486	13605786	-	13603486	13607500	A5SS	0.33	50	50	ENSMUST00000127050.2	ENSMUSG00000029569.10	Tmem168	chr6	protein_coding	transmembrane protein 168
chr6	13605958;13607083	13606923;13607829	-	13605958	13607829	cassetteExon	0.5	100	100	ENSMUST00000140750.2	ENSMUSG00000029569.10	Tmem168	chr6	protein_coding	transmembrane protein 168
chr6	13605958;13607414	13606923;13607829	-	13605958	13607829	cassetteExon	0.5	100	100	ENSMUST00000140750.2	ENSMUSG00000029569.10	Tmem168	chr6	protein_coding	transmembrane protein 168
chr6	13603486;13607576	13607500;13607829	-	13603486;13605958	13605786;13607829	MXE	0.5	100	100	ENSMUST00000140750.2	ENSMUSG00000029569.10	Tmem168	chr6	protein_coding	transmembrane protein 168
chr6	13607414	13607829	-	13607083	13607829	A3SS	0.25	50	50	ENSMUST00000155179.2	ENSMUSG00000029569.10	Tmem168	chr6	protein_coding	transmembrane protein 168
chr6	13607576	13607829	-	13607083	13607829	A3SS	0.25	50	50	ENSMUST00000155179.2	ENSMUSG00000029569.10	Tmem168	chr6	protein_coding	transmembrane protein 168
chr6	13607414	13607829	-	13607414;13607576	13607500;13607829	ES	0.33	50	50	ENSMUST00000146139.2	ENSMUSG00000029569.10	Tmem168	chr6	protein_coding	transmembrane protein 168
chr6	13605958	13607829	-	13607414	13607829	3pMXE	0.16	50	50	ENSMUST00000138637.2	ENSMUSG00000029569.10	Tmem168	chr6	protein_coding	transmembrane protein 168
chr6	13837072	13838278	-	13837072	13837998	A5SS&ES	0.5	50	50	ENSMUST00000060442.14	ENSMUSG00000048216.14	Gpr85	chr6	protein_coding	G protein-coupled receptor 85
chr6	13839178	13839417	-	13839178	13839641	A5SS	0.5	50	50	ENSMUST00000060442.14	ENSMUSG00000048216.14	Gpr85	chr6	protein_coding	G protein-coupled receptor 85
chr6	13870739	13871438	-	13870739;13871145	13871055;13871438	ES	0.33	50	50	ENSMUST00000139231.2	ENSMUSG00000052419.8	2610001J05Rik	chr6	protein_coding	RIKEN cDNA 2610001J05 gene
chr6	13871162	13871438	-	13871145	13871438	A3SS	0.33	50	50	ENSMUST00000139231.2	ENSMUSG00000052419.8	2610001J05Rik	chr6	protein_coding	RIKEN cDNA 2610001J05 gene
chr6	13870739	13871438	-	13870739;13871162	13871055;13871438	ES	0.33	50	50	ENSMUST00000155856.2	ENSMUSG00000052419.8	2610001J05Rik	chr6	protein_coding	RIKEN cDNA 2610001J05 gene
chr6	13881380	13895091	+	13881380	14044193	A3SS	0.5	50	50	ENSMUST00000181090.8	ENSMUSG00000097616.8	1110019D14Rik	chr6	lncRNA	RIKEN cDNA 1110019D14 gene
chr6	14901760	15084481	+	14901760;14988463	14988322;15084481	ES	0.5	50	50	ENSMUST00000115477.8	ENSMUSG00000029563.17	Foxp2	chr6	protein_coding	forkhead box P2
chr6	15405641	15411025	+	15405641;15409941	15409740;15411025	ES	0.5	50	50	ENSMUST00000115477.8	ENSMUSG00000029563.17	Foxp2	chr6	protein_coding	forkhead box P2
chr6	15286769;15324686	15324612;15376688	+	15286769	15376688	cassetteExon	0.5	100	100	ENSMUST00000115477.8	ENSMUSG00000029563.17	Foxp2	chr6	protein_coding	forkhead box P2
chr6	15376825;15377729	15377680;15377887	+	15376825	15377887	cassetteExon	0.5	100	100	ENSMUST00000115477.8	ENSMUSG00000029563.17	Foxp2	chr6	protein_coding	forkhead box P2
chr6	14988463	14990121	+	14988463	15084481	A3SS	0.5	50	50	ENSMUST00000115477.8	ENSMUSG00000029563.17	Foxp2	chr6	protein_coding	forkhead box P2
chr6	15197127	15379658	+	15197127	15286680	A3SS&ES	0.5	50	50	ENSMUST00000115477.8	ENSMUSG00000029563.17	Foxp2	chr6	protein_coding	forkhead box P2
chr6	15376825	15377869	+	15376825	15377887	A3SS	0.25	50	50	ENSMUST00000115477.8	ENSMUSG00000029563.17	Foxp2	chr6	protein_coding	forkhead box P2
chr6	15376825	15377950	+	15376825	15377887	A3SS	0.25	50	50	ENSMUST00000115477.8	ENSMUSG00000029563.17	Foxp2	chr6	protein_coding	forkhead box P2
chr6	14903559	14988322	+	14901760	14988322	A5SS	0.5	50	50	ENSMUST00000115477.8	ENSMUSG00000029563.17	Foxp2	chr6	protein_coding	forkhead box P2
chr6	15184943	15196950	+	15084574	15196950	A5SS	0.25	50	50	ENSMUST00000115477.8	ENSMUSG00000029563.17	Foxp2	chr6	protein_coding	forkhead box P2
chr6	15185428	15196950	+	15084574	15196950	A5SS	0.25	50	50	ENSMUST00000115477.8	ENSMUSG00000029563.17	Foxp2	chr6	protein_coding	forkhead box P2
chr6	15185816	15196950	+	15084574	15196950	A5SS	0.25	50	50	ENSMUST00000115477.8	ENSMUSG00000029563.17	Foxp2	chr6	protein_coding	forkhead box P2
chr6	15254456	15286680	+	15197127	15286680	A5SS	0.5	50	50	ENSMUST00000115477.8	ENSMUSG00000029563.17	Foxp2	chr6	protein_coding	forkhead box P2
chr6	15376825;15377729	15377680;15377869	+	15376825	15377869	cassetteExon	0.5	100	100	ENSMUST00000151060.8	ENSMUSG00000029563.17	Foxp2	chr6	protein_coding	forkhead box P2
chr6	15376825	15377950	+	15376825	15377869	A3SS	0.25	50	50	ENSMUST00000151060.8	ENSMUSG00000029563.17	Foxp2	chr6	protein_coding	forkhead box P2
chr6	15185428	15196950	+	15184943	15196950	A5SS	0.25	50	50	ENSMUST00000115470.3	ENSMUSG00000029563.17	Foxp2	chr6	protein_coding	forkhead box P2
chr6	15185816	15196950	+	15184943	15196950	A5SS	0.25	50	50	ENSMUST00000115470.3	ENSMUSG00000029563.17	Foxp2	chr6	protein_coding	forkhead box P2
chr6	15185816	15196950	+	15185428	15196950	A5SS	0.25	50	50	ENSMUST00000154448.2	ENSMUSG00000029563.17	Foxp2	chr6	protein_coding	forkhead box P2
chr6	15376825	15377680	+	15376825	15377950	A3SS	0.25	50	50	ENSMUST00000115472.8	ENSMUSG00000029563.17	Foxp2	chr6	protein_coding	forkhead box P2
chr6	15376825	15377887	+	15376825	15377680	A3SS&ES	0.25	50	50	ENSMUST00000152563.3	ENSMUSG00000029563.17	Foxp2	chr6	protein_coding	forkhead box P2
chr6	15377729	15377887	+	15377729	15377869	A3SS	0.5	50	50	ENSMUST00000152563.3	ENSMUSG00000029563.17	Foxp2	chr6	protein_coding	forkhead box P2
chr6	15376825	15377869	+	15376825	15377680	A3SS&ES	0.25	50	50	ENSMUST00000115475.7	ENSMUSG00000029563.17	Foxp2	chr6	protein_coding	forkhead box P2
chr6	15721363	15729014	+	15721363	15740987	A3SS	0.5	50	50	ENSMUST00000101663.10	ENSMUSG00000041390.19	Mdfic	chr6	protein_coding	MyoD family inhibitor domain containing
chr6	15728060	15740987	+	15721363	15740987	A5SS	0.33	50	50	ENSMUST00000101663.10	ENSMUSG00000041390.19	Mdfic	chr6	protein_coding	MyoD family inhibitor domain containing
chr6	15738582	15740987	+	15721363	15740987	A5SS	0.33	50	50	ENSMUST00000101663.10	ENSMUSG00000041390.19	Mdfic	chr6	protein_coding	MyoD family inhibitor domain containing
chr6	15728060	15740987	+	15738582	15740987	A5SS&ES	0.33	50	50	ENSMUST00000140516.8	ENSMUSG00000041390.19	Mdfic	chr6	protein_coding	MyoD family inhibitor domain containing
chr6	16835348	16844194	-	16835348;16840543	16840468;16844194	ES	0.5	50	50	ENSMUST00000031533.11	ENSMUSG00000029553.11	Tfec	chr6	protein_coding	transcription factor EC
chr6	17087242	17171370	-	17065291	17171370	A3SS	0.2	50	50	ENSMUST00000140709.2	ENSMUSG00000054556.7	Gm4876	chr6	lncRNA	predicted gene 4876
chr6	17111196	17171370	-	17065291	17171370	A3SS	0.2	50	50	ENSMUST00000140709.2	ENSMUSG00000054556.7	Gm4876	chr6	lncRNA	predicted gene 4876
chr6	17145467	17171370	-	17065291	17171370	A3SS	0.2	50	50	ENSMUST00000140709.2	ENSMUSG00000054556.7	Gm4876	chr6	lncRNA	predicted gene 4876
chr6	17162091	17171370	-	17065291	17171370	A3SS	0.2	50	50	ENSMUST00000140709.2	ENSMUSG00000054556.7	Gm4876	chr6	lncRNA	predicted gene 4876
chr6	17111196	17171370	-	17087242	17171370	A3SS	0.25	50	50	ENSMUST00000139701.2	ENSMUSG00000054556.7	Gm4876	chr6	lncRNA	predicted gene 4876
chr6	17145467	17171370	-	17087242	17171370	A3SS	0.25	50	50	ENSMUST00000139701.2	ENSMUSG00000054556.7	Gm4876	chr6	lncRNA	predicted gene 4876
chr6	17162091	17171370	-	17087242	17171370	A3SS	0.25	50	50	ENSMUST00000139701.2	ENSMUSG00000054556.7	Gm4876	chr6	lncRNA	predicted gene 4876
chr6	17111196	17171370	-	17145467	17171370	A3SS&ES	0.33	50	50	ENSMUST00000136503.2	ENSMUSG00000054556.7	Gm4876	chr6	lncRNA	predicted gene 4876
chr6	17162091	17171370	-	17145467	17171370	A3SS	0.33	50	50	ENSMUST00000136503.2	ENSMUSG00000054556.7	Gm4876	chr6	lncRNA	predicted gene 4876
chr6	17162091	17171370	-	17111196	17171370	A3SS	0.2	50	50	ENSMUST00000150251.2	ENSMUSG00000054556.7	Gm4876	chr6	lncRNA	predicted gene 4876
chr6	17065312	17096127	+	17065312;17086221	17086136;17096127	ES	0.5	50	50	ENSMUST00000115467.11	ENSMUSG00000029552.20	Tes	chr6	protein_coding	testin LIM domain protein
chr6	17065312	17080918	+	17065312	17086136	A3SS	0.33	50	50	ENSMUST00000115467.11	ENSMUSG00000029552.20	Tes	chr6	protein_coding	testin LIM domain protein
chr6	17086221	17088428	+	17086221	17096127	A3SS	0.5	50	50	ENSMUST00000115467.11	ENSMUSG00000029552.20	Tes	chr6	protein_coding	testin LIM domain protein
chr6	17082642	17086136	+	17065312	17086136	A5SS	0.5	50	50	ENSMUST00000115467.11	ENSMUSG00000029552.20	Tes	chr6	protein_coding	testin LIM domain protein
chr6	17065312	17080918	+	17065312	17096127	A3SS	0.33	50	50	ENSMUST00000154266.3	ENSMUSG00000029552.20	Tes	chr6	protein_coding	testin LIM domain protein
chr6	17202134	17208913	+	17202134	17204571	3pMXE	0.5	50	50	ENSMUST00000125170.8	ENSMUSG00000085171.8	D830026I12Rik	chr6	lncRNA	RIKEN cDNA D830026I12 gene
chr6	17198187	17201732	+	17197789	17201732	A5SS	0.5	50	50	ENSMUST00000125170.8	ENSMUSG00000085171.8	D830026I12Rik	chr6	lncRNA	RIKEN cDNA D830026I12 gene
chr6	17281509	17286896	+	17281509;17282081	17281894;17286896	ES	0.5	50	50	ENSMUST00000000058.7	ENSMUSG00000000058.7	Cav2	chr6	protein_coding	caveolin 2
chr6	17281509	17286896	+	17281509	17281894	3pMXE	0.5	50	50	ENSMUST00000115459.2	ENSMUSG00000000058.7	Cav2	chr6	protein_coding	caveolin 2
chr6	17306478	17307913	+	17306478	17307880	A3SS	0.5	50	50	ENSMUST00000007799.13	ENSMUSG00000007655.17	Cav1	chr6	protein_coding	caveolin 1, caveolae protein
chr6	17308044	17317722	+	17308044	17339112	A3SS	0.33	50	50	ENSMUST00000007799.13	ENSMUSG00000007655.17	Cav1	chr6	protein_coding	caveolin 1, caveolae protein
chr6	17308044	17327237	+	17308044	17339112	A3SS	0.33	50	50	ENSMUST00000007799.13	ENSMUSG00000007655.17	Cav1	chr6	protein_coding	caveolin 1, caveolae protein
chr6	17306488	17307880	+	17306478	17307880	A5SS	0.25	50	50	ENSMUST00000007799.13	ENSMUSG00000007655.17	Cav1	chr6	protein_coding	caveolin 1, caveolae protein
chr6	17307163	17307880	+	17306478	17307880	A5SS	0.25	50	50	ENSMUST00000007799.13	ENSMUSG00000007655.17	Cav1	chr6	protein_coding	caveolin 1, caveolae protein
chr6	17307317	17307880	+	17306478	17307880	A5SS	0.25	50	50	ENSMUST00000007799.13	ENSMUSG00000007655.17	Cav1	chr6	protein_coding	caveolin 1, caveolae protein
chr6	17308044	17327237	+	17308044;17317917	17317722;17327237	ES	0.5	50	50	ENSMUST00000130505.3	ENSMUSG00000007655.17	Cav1	chr6	protein_coding	caveolin 1, caveolae protein
chr6	17307163	17307880	+	17306488	17307880	A5SS	0.25	50	50	ENSMUST00000177234.2	ENSMUSG00000007655.17	Cav1	chr6	protein_coding	caveolin 1, caveolae protein
chr6	17307317	17307880	+	17306488	17307880	A5SS	0.25	50	50	ENSMUST00000177234.2	ENSMUSG00000007655.17	Cav1	chr6	protein_coding	caveolin 1, caveolae protein
chr6	17307317	17307880	+	17307163	17307880	A5SS	0.25	50	50	ENSMUST00000123439.8	ENSMUSG00000007655.17	Cav1	chr6	protein_coding	caveolin 1, caveolae protein
chr6	17548838	17553238	+	17548838;17549171	17549031;17553238	ES	0.5	50	50	ENSMUST00000115443.8	ENSMUSG00000009376.16	Met	chr6	protein_coding	met proto-oncogene
chr6	17464139	17487796	+	17464247	17487796	A5SS	0.5	50	50	ENSMUST00000115443.8	ENSMUSG00000009376.16	Met	chr6	protein_coding	met proto-oncogene
chr6	17464139	17491226	+	17487844	17491226	A5SS&ES	0.5	50	50	ENSMUST00000115443.8	ENSMUSG00000009376.16	Met	chr6	protein_coding	met proto-oncogene
chr6	17464139	17491226	+	17464139;17487844	17487796;17491226	ES	0.5	50	50	ENSMUST00000140070.8	ENSMUSG00000009376.16	Met	chr6	protein_coding	met proto-oncogene
chr6	17637159	17648519	+	17636439	17648519	A5SS	0.5	50	50	ENSMUST00000148694.8	ENSMUSG00000015733.14	Capza2	chr6	protein_coding	capping protein (actin filament) muscle Z-line, alpha 2
chr6	17637159	17650039	+	17637159	17648519	A3SS&ES	0.5	50	50	ENSMUST00000015877.14	ENSMUSG00000015733.14	Capza2	chr6	protein_coding	capping protein (actin filament) muscle Z-line, alpha 2
chr6	17656443	17660728	+	17656443	17657172	A3SS&ES	0.5	50	50	ENSMUST00000015877.14	ENSMUSG00000015733.14	Capza2	chr6	protein_coding	capping protein (actin filament) muscle Z-line, alpha 2
chr6	17657251	17660728	+	17657251	17660748	A3SS	0.5	50	50	ENSMUST00000015877.14	ENSMUSG00000015733.14	Capza2	chr6	protein_coding	capping protein (actin filament) muscle Z-line, alpha 2
chr6	17656443	17660728	+	17656443;17657251	17657172;17660728	ES	0.5	50	50	ENSMUST00000130606.8	ENSMUSG00000015733.14	Capza2	chr6	protein_coding	capping protein (actin filament) muscle Z-line, alpha 2
chr6	17694361	17834616	+	17694361	17819249	3pMXE	0.33	50	50	ENSMUST00000129105.2	ENSMUSG00000029534.18	St7	chr6	protein_coding	suppression of tumorigenicity 7
chr6	17694361	17886003	+	17694361	17819249	3pMXE	0.33	50	50	ENSMUST00000129105.2	ENSMUSG00000029534.18	St7	chr6	protein_coding	suppression of tumorigenicity 7
chr6	17743693	17819249	+	17694361	17819249	A5SS	0.33	50	50	ENSMUST00000129105.2	ENSMUSG00000029534.18	St7	chr6	protein_coding	suppression of tumorigenicity 7
chr6	17749613	17819249	+	17694361	17819249	A5SS	0.33	50	50	ENSMUST00000129105.2	ENSMUSG00000029534.18	St7	chr6	protein_coding	suppression of tumorigenicity 7
chr6	17694361	17834616	+	17694361;17819331	17819249;17834616	ES	0.33	50	50	ENSMUST00000115420.8	ENSMUSG00000029534.18	St7	chr6	protein_coding	suppression of tumorigenicity 7
chr6	17922138	17942669	+	17922138;17934257	17934118;17942669	ES	0.5	50	50	ENSMUST00000115420.8	ENSMUSG00000029534.18	St7	chr6	protein_coding	suppression of tumorigenicity 7
chr6	17848078;17850424	17850356;17852257	+	17848078	17852257	cassetteExon	0.5	100	100	ENSMUST00000115420.8	ENSMUSG00000029534.18	St7	chr6	protein_coding	suppression of tumorigenicity 7
chr6	17904968;17905841	17905706;17906407	+	17904968	17906407	cassetteExon	0.5	100	100	ENSMUST00000115420.8	ENSMUSG00000029534.18	St7	chr6	protein_coding	suppression of tumorigenicity 7
chr6	17922138;17930857	17930765;17934118	+	17922138	17934118	cassetteExon	0.5	100	100	ENSMUST00000115420.8	ENSMUSG00000029534.18	St7	chr6	protein_coding	suppression of tumorigenicity 7
chr6	17819331	17827991	+	17819331	17834616	A3SS	0.5	50	50	ENSMUST00000115420.8	ENSMUSG00000029534.18	St7	chr6	protein_coding	suppression of tumorigenicity 7
chr6	17848078	17848418	+	17848078	17852257	A3SS	0.33	50	50	ENSMUST00000115420.8	ENSMUSG00000029534.18	St7	chr6	protein_coding	suppression of tumorigenicity 7
chr6	17834102	17834616	+	17819331	17834616	A5SS	0.33	50	50	ENSMUST00000115420.8	ENSMUSG00000029534.18	St7	chr6	protein_coding	suppression of tumorigenicity 7
chr6	17840639	17844908	+	17834775	17844908	A5SS	0.5	50	50	ENSMUST00000115420.8	ENSMUSG00000029534.18	St7	chr6	protein_coding	suppression of tumorigenicity 7
chr6	17848078	17848418	+	17848078	17850356	A3SS	0.33	50	50	ENSMUST00000115419.8	ENSMUSG00000029534.18	St7	chr6	protein_coding	suppression of tumorigenicity 7
chr6	17922138	17930765	+	17922123	17930765	A5SS	0.5	50	50	ENSMUST00000115419.8	ENSMUSG00000029534.18	St7	chr6	protein_coding	suppression of tumorigenicity 7
chr6	17922138	17934118	+	17930857	17934118	A5SS&ES	0.5	50	50	ENSMUST00000115419.8	ENSMUSG00000029534.18	St7	chr6	protein_coding	suppression of tumorigenicity 7
chr6	17922138	17942669	+	17934257	17942669	A5SS&ES	0.5	50	50	ENSMUST00000115419.8	ENSMUSG00000029534.18	St7	chr6	protein_coding	suppression of tumorigenicity 7
chr6	17834102	17834616	+	17694361	17834616	A5SS	0.33	50	50	ENSMUST00000125673.8	ENSMUSG00000029534.18	St7	chr6	protein_coding	suppression of tumorigenicity 7
chr6	17694361	17834616	+	17694361	17886003	A3SS	0.33	50	50	ENSMUST00000150281.8	ENSMUSG00000029534.18	St7	chr6	protein_coding	suppression of tumorigenicity 7
chr6	17855027	17886003	+	17694361	17886003	A5SS	0.5	50	50	ENSMUST00000150281.8	ENSMUSG00000029534.18	St7	chr6	protein_coding	suppression of tumorigenicity 7
chr6	17922138	17930765	+	17922138	17942669	A3SS	0.33	50	50	ENSMUST00000115418.8	ENSMUSG00000029534.18	St7	chr6	protein_coding	suppression of tumorigenicity 7
chr6	17749613	17819249	+	17743693	17819249	A5SS	0.33	50	50	ENSMUST00000000674.13	ENSMUSG00000029534.18	St7	chr6	protein_coding	suppression of tumorigenicity 7
chr6	17886116	17905706	+	17904968	17905706	A5SS&ES	0.33	50	50	ENSMUST00000138726.8	ENSMUSG00000029534.18	St7	chr6	protein_coding	suppression of tumorigenicity 7
chr6	17905611	17905706	+	17904968	17905706	A5SS	0.33	50	50	ENSMUST00000138726.8	ENSMUSG00000029534.18	St7	chr6	protein_coding	suppression of tumorigenicity 7
chr6	17848078	17852257	+	17848078	17850356	A3SS	0.33	50	50	ENSMUST00000154059.8	ENSMUSG00000029534.18	St7	chr6	protein_coding	suppression of tumorigenicity 7
chr6	17904968	17906407	+	17905841	17906407	A5SS&ES	0.5	50	50	ENSMUST00000144743.8	ENSMUSG00000029534.18	St7	chr6	protein_coding	suppression of tumorigenicity 7
chr6	17905611	17905706	+	17886116	17905706	A5SS	0.33	50	50	ENSMUST00000144743.8	ENSMUSG00000029534.18	St7	chr6	protein_coding	suppression of tumorigenicity 7
chr6	18076638	18103499	-	18076638;18077263	18077152;18103499	ES	0.5	50	50	ENSMUST00000010940.11	ENSMUSG00000010796.12	Asz1	chr6	protein_coding	ankyrin repeat, SAM and basic leucine zipper domain containing 1
chr6	18075844	18076504	-	18075884	18076504	A3SS	0.5	50	50	ENSMUST00000010940.11	ENSMUSG00000010796.12	Asz1	chr6	protein_coding	ankyrin repeat, SAM and basic leucine zipper domain containing 1
chr6	18076638	18103499	-	18077263	18103499	3pMXE	0.5	50	50	ENSMUST00000131614.2	ENSMUSG00000010796.12	Asz1	chr6	protein_coding	ankyrin repeat, SAM and basic leucine zipper domain containing 1
chr6	18214314	18221469	+	18214314;18220709	18220620;18221469	ES	0.5	50	50	ENSMUST00000115405.9	ENSMUSG00000041301.16	Cftr	chr6	protein_coding	cystic fibrosis transmembrane conductance regulator
chr6	18255473	18258230	+	18255473;18256040	18255952;18258230	ES	0.5	50	50	ENSMUST00000115405.9	ENSMUSG00000041301.16	Cftr	chr6	protein_coding	cystic fibrosis transmembrane conductance regulator
chr6	18235346	18235457	+	18235346	18255379	A3SS	0.5	50	50	ENSMUST00000115405.9	ENSMUSG00000041301.16	Cftr	chr6	protein_coding	cystic fibrosis transmembrane conductance regulator
chr6	18255473	18255933	+	18255473	18255952	A3SS	0.33	50	50	ENSMUST00000115405.9	ENSMUSG00000041301.16	Cftr	chr6	protein_coding	cystic fibrosis transmembrane conductance regulator
chr6	18255473	18258230	+	18255473;18256040	18255933;18258230	ES	0.5	50	50	ENSMUST00000140407.8	ENSMUSG00000041301.16	Cftr	chr6	protein_coding	cystic fibrosis transmembrane conductance regulator
chr6	18397431	18405183	-	18397431;18397603	18397517;18405183	ES	0.5	50	50	ENSMUST00000152499.8	ENSMUSG00000000416.17	Cttnbp2	chr6	protein_coding	cortactin binding protein 2
chr6	18427641	18433982	-	18427641;18429158	18429119;18433982	ES	0.5	50	50	ENSMUST00000146775.8	ENSMUSG00000000416.17	Cttnbp2	chr6	protein_coding	cortactin binding protein 2
chr6	18427641	18433819	-	18427641	18429119	A5SS&ES	0.33	50	50	ENSMUST00000146775.8	ENSMUSG00000000416.17	Cttnbp2	chr6	protein_coding	cortactin binding protein 2
chr6	18427641	18433819	-	18427641	18433982	A5SS	0.33	50	50	ENSMUST00000148602.8	ENSMUSG00000000416.17	Cttnbp2	chr6	protein_coding	cortactin binding protein 2
chr6	18502055	18513042	-	18502055	18514654	A5SS	0.5	50	50	ENSMUST00000148602.8	ENSMUSG00000000416.17	Cttnbp2	chr6	protein_coding	cortactin binding protein 2
chr6	18849665;18851000	18850910;18851635	+	18849665	18851635	cassetteExon	0.5	100	100	ENSMUST00000056398.11	ENSMUSG00000044155.12	Lsm8	chr6	protein_coding	LSM8 homolog, U6 small nuclear RNA associated
chr6	18868095	18868240	+	18868095	18868243	A3SS	0.5	50	50	ENSMUST00000031489.10	ENSMUSG00000029517.14	Ankrd7	chr6	protein_coding	ankyrin repeat domain 7
chr6	21772935;21795720	21795577;21799878	-	21772935	21799878	cassetteExon	0.5	100	100	ENSMUST00000120965.8	ENSMUSG00000029669.15	Tspan12	chr6	protein_coding	tetraspanin 12
chr6	21851144	21851825	-	21851144	21852011	A5SS	0.33	50	50	ENSMUST00000120965.8	ENSMUSG00000029669.15	Tspan12	chr6	protein_coding	tetraspanin 12
chr6	21851144	21851936	-	21851144	21852011	A5SS	0.33	50	50	ENSMUST00000120965.8	ENSMUSG00000029669.15	Tspan12	chr6	protein_coding	tetraspanin 12
chr6	21772935	21799878	-	21795720	21799878	3pMXE	0.5	50	50	ENSMUST00000123116.8	ENSMUSG00000029669.15	Tspan12	chr6	protein_coding	tetraspanin 12
chr6	21851144	21851825	-	21851144	21851936	A5SS	0.33	50	50	ENSMUST00000123116.8	ENSMUSG00000029669.15	Tspan12	chr6	protein_coding	tetraspanin 12
chr6	21949792	21952128	+	21949792;21950108	21950037;21952128	ES	0.5	50	50	ENSMUST00000031680.10	ENSMUSG00000029670.13	Ing3	chr6	protein_coding	inhibitor of growth family, member 3
chr6	21953827	21967626	+	21953827;21965829	21965733;21967626	ES	0.5	50	50	ENSMUST00000031680.10	ENSMUSG00000029670.13	Ing3	chr6	protein_coding	inhibitor of growth family, member 3
chr6	21950108	21952091	+	21950108	21952128	A3SS	0.5	50	50	ENSMUST00000031680.10	ENSMUSG00000029670.13	Ing3	chr6	protein_coding	inhibitor of growth family, member 3
chr6	21967697	21968917	+	21967697	21968884	A3SS	0.5	50	50	ENSMUST00000031680.10	ENSMUSG00000029670.13	Ing3	chr6	protein_coding	inhibitor of growth family, member 3
chr6	21949792	21952128	+	21949792	21950037	A3SS&ES	0.5	50	50	ENSMUST00000136200.8	ENSMUSG00000029670.13	Ing3	chr6	protein_coding	inhibitor of growth family, member 3
chr6	21949792	21952128	+	21950108	21952128	5pMXE	0.5	50	50	ENSMUST00000149728.7	ENSMUSG00000029670.13	Ing3	chr6	protein_coding	inhibitor of growth family, member 3
chr6	22017085	22059876	+	22017085;22051398	22051292;22059876	ES	0.5	50	50	ENSMUST00000115383.9	ENSMUSG00000062980.16	Cped1	chr6	protein_coding	cadherin-like and PC-esterase domain containing 1
chr6	21987058	22009024	+	21987058	22016902	A3SS	0.5	50	50	ENSMUST00000115383.9	ENSMUSG00000062980.16	Cped1	chr6	protein_coding	cadherin-like and PC-esterase domain containing 1
chr6	22059951	22069340	+	22059951	22085029	A3SS	0.5	50	50	ENSMUST00000115383.9	ENSMUSG00000062980.16	Cped1	chr6	protein_coding	cadherin-like and PC-esterase domain containing 1
chr6	22237741	22239963	+	22237741	22254465	A3SS	0.5	50	50	ENSMUST00000115383.9	ENSMUSG00000062980.16	Cped1	chr6	protein_coding	cadherin-like and PC-esterase domain containing 1
chr6	22026048	22051292	+	22017085	22051292	A5SS	0.5	50	50	ENSMUST00000115383.9	ENSMUSG00000062980.16	Cped1	chr6	protein_coding	cadherin-like and PC-esterase domain containing 1
chr6	22289027	22297766	+	22289027	22290917	3pMXE	0.5	50	50	ENSMUST00000128245.8	ENSMUSG00000029671.16	Wnt16	chr6	protein_coding	wingless-type MMTV integration site family, member 16
chr6	22289027	22297766	+	22289027;22291203	22290917;22297766	ES	0.5	50	50	ENSMUST00000031681.10	ENSMUSG00000029671.16	Wnt16	chr6	protein_coding	wingless-type MMTV integration site family, member 16
chr6	22291203	22294266	+	22291203	22297766	A3SS	0.5	50	50	ENSMUST00000031681.10	ENSMUSG00000029671.16	Wnt16	chr6	protein_coding	wingless-type MMTV integration site family, member 16
chr6	22339376	22355994	-	22339376;22343318	22343265;22355994	ES	0.33	50	50	ENSMUST00000165576.8	ENSMUSG00000029672.17	Fam3c	chr6	protein_coding	family with sequence similarity 3, member C
chr6	22322347;22326417	22326357;22328554	-	22322347	22328554	cassetteExon	0.5	100	100	ENSMUST00000165576.8	ENSMUSG00000029672.17	Fam3c	chr6	protein_coding	family with sequence similarity 3, member C
chr6	22343318;22355233	22355013;22355994	-	22343318	22355994	cassetteExon	0.5	100	100	ENSMUST00000165576.8	ENSMUSG00000029672.17	Fam3c	chr6	protein_coding	family with sequence similarity 3, member C
chr6	22328677	22329176	-	22328677	22329578	A5SS	0.5	50	50	ENSMUST00000165576.8	ENSMUSG00000029672.17	Fam3c	chr6	protein_coding	family with sequence similarity 3, member C
chr6	22343318	22343665	-	22343318	22355994	A5SS	0.33	50	50	ENSMUST00000165576.8	ENSMUSG00000029672.17	Fam3c	chr6	protein_coding	family with sequence similarity 3, member C
chr6	22343318	22343665	-	22343318	22355013	A5SS	0.33	50	50	ENSMUST00000163963.8	ENSMUSG00000029672.17	Fam3c	chr6	protein_coding	family with sequence similarity 3, member C
chr6	22355233	22355994	-	22339376	22355994	A3SS	0.33	50	50	ENSMUST00000081288.14	ENSMUSG00000029672.17	Fam3c	chr6	protein_coding	family with sequence similarity 3, member C
chr6	23000198	23007273	+	23002745	23007273	A5SS	0.5	50	50	ENSMUST00000090568.7	ENSMUSG00000068748.8	Ptprz1	chr6	protein_coding	protein tyrosine phosphatase, receptor type Z, polypeptide 1
chr6	23094310	23097142	-	23094310;23096892	23096825;23097142	ES	0.5	50	50	ENSMUST00000031707.14	ENSMUSG00000029695.14	Aass	chr6	protein_coding	aminoadipate-semialdehyde synthase
chr6	23121052	23132880	-	23121052;23122736	23122512;23132880	ES	0.5	50	50	ENSMUST00000031707.14	ENSMUSG00000029695.14	Aass	chr6	protein_coding	aminoadipate-semialdehyde synthase
chr6	23097201	23127496	-	23097201	23107139	A5SS&ES	0.5	50	50	ENSMUST00000031707.14	ENSMUSG00000029695.14	Aass	chr6	protein_coding	aminoadipate-semialdehyde synthase
chr6	23323434	23329019	-	23323434;23328901	23328782;23329019	ES	0.5	50	50	ENSMUST00000166458.9	ENSMUSG00000017978.19	Cadps2	chr6	protein_coding	Ca2+-dependent activator protein for secretion 2
chr6	23329160	23355823	-	23329160;23344371	23344206;23355823	ES	0.2	50	50	ENSMUST00000166458.9	ENSMUSG00000017978.19	Cadps2	chr6	protein_coding	Ca2+-dependent activator protein for secretion 2
chr6	23355926	23382880	-	23355926;23381076	23381056;23382880	ES	0.5	50	50	ENSMUST00000166458.9	ENSMUSG00000017978.19	Cadps2	chr6	protein_coding	Ca2+-dependent activator protein for secretion 2
chr6	23314206;23320946	23320932;23321705	-	23314206	23321705	cassetteExon	0.5	100	100	ENSMUST00000166458.9	ENSMUSG00000017978.19	Cadps2	chr6	protein_coding	Ca2+-dependent activator protein for secretion 2
chr6	23413083;23420012	23420004;23427163	-	23413083	23427163	cassetteExon	0.5	100	100	ENSMUST00000166458.9	ENSMUSG00000017978.19	Cadps2	chr6	protein_coding	Ca2+-dependent activator protein for secretion 2
chr6	23263888	23269245	-	23263715	23269245	A3SS	0.5	50	50	ENSMUST00000166458.9	ENSMUSG00000017978.19	Cadps2	chr6	protein_coding	Ca2+-dependent activator protein for secretion 2
chr6	23344362	23355823	-	23344371	23355823	A3SS	0.2	50	50	ENSMUST00000166458.9	ENSMUSG00000017978.19	Cadps2	chr6	protein_coding	Ca2+-dependent activator protein for secretion 2
chr6	23344590	23355823	-	23344371	23355823	A3SS	0.2	50	50	ENSMUST00000166458.9	ENSMUSG00000017978.19	Cadps2	chr6	protein_coding	Ca2+-dependent activator protein for secretion 2
chr6	23354201	23355823	-	23344371	23355823	A3SS	0.2	50	50	ENSMUST00000166458.9	ENSMUSG00000017978.19	Cadps2	chr6	protein_coding	Ca2+-dependent activator protein for secretion 2
chr6	23410041	23410741	-	23390485	23410741	A3SS	0.5	50	50	ENSMUST00000166458.9	ENSMUSG00000017978.19	Cadps2	chr6	protein_coding	Ca2+-dependent activator protein for secretion 2
chr6	23344362	23355823	-	23344362;23354201	23354193;23355823	ES	0.2	50	50	ENSMUST00000115358.9	ENSMUSG00000017978.19	Cadps2	chr6	protein_coding	Ca2+-dependent activator protein for secretion 2
chr6	23344362;23344590	23344582;23355823	-	23344362;23354201	23354193;23355823	MXE	0.5	100	100	ENSMUST00000115358.9	ENSMUSG00000017978.19	Cadps2	chr6	protein_coding	Ca2+-dependent activator protein for secretion 2
chr6	23344362	23355823	-	23344362;23344590	23344582;23355823	ES	0.2	50	50	ENSMUST00000163871.9	ENSMUSG00000017978.19	Cadps2	chr6	protein_coding	Ca2+-dependent activator protein for secretion 2
chr6	23329160	23355823	-	23329160;23344362	23344206;23355823	ES	0.2	50	50	ENSMUST00000115361.9	ENSMUSG00000017978.19	Cadps2	chr6	protein_coding	Ca2+-dependent activator protein for secretion 2
chr6	23329160;23344590	23344206;23355823	-	23329160	23355823	cassetteExon	0.5	100	100	ENSMUST00000156986.8	ENSMUSG00000017978.19	Cadps2	chr6	protein_coding	Ca2+-dependent activator protein for secretion 2
chr6	23354201	23355823	-	23329160	23355823	A3SS	0.2	50	50	ENSMUST00000156986.8	ENSMUSG00000017978.19	Cadps2	chr6	protein_coding	Ca2+-dependent activator protein for secretion 2
chr6	24108262	24108400	-	24108262	24117924	A5SS	0.5	50	50	ENSMUST00000031713.9	ENSMUSG00000029700.12	Slc13a1	chr6	protein_coding	solute carrier family 13 (sodium/sulfate symporters), member 1
chr6	24519256	24527272	-	24519256	24522658	5pMXE	0.5	50	50	ENSMUST00000132588.8	ENSMUSG00000023089.13	Ndufa5	chr6	protein_coding	NADH:ubiquinone oxidoreductase subunit A5
chr6	24519256;24522774	24522658;24527272	-	24519256	24527272	cassetteExon	0.5	100	100	ENSMUST00000118558.5	ENSMUSG00000023089.13	Ndufa5	chr6	protein_coding	NADH:ubiquinone oxidoreductase subunit A5
chr6	24527316	24527459	-	24527316	24527525	A5SS	0.5	50	50	ENSMUST00000118558.5	ENSMUSG00000023089.13	Ndufa5	chr6	protein_coding	NADH:ubiquinone oxidoreductase subunit A5
chr6	24556299	24556505	+	24528268	24556505	A5SS	0.5	50	50	ENSMUST00000031696.10	ENSMUSG00000029685.16	Asb15	chr6	protein_coding	ankyrin repeat and SOCS box-containing 15
chr6	24633209	24633836	-	24629947	24633836	A3SS	0.5	50	50	ENSMUST00000031695.15	ENSMUSG00000029684.15	Wasl	chr6	protein_coding	WASP like actin nucleation promoting factor
chr6	24637898	24664535	-	24637782	24664535	A3SS	0.5	50	50	ENSMUST00000031695.15	ENSMUSG00000029684.15	Wasl	chr6	protein_coding	WASP like actin nucleation promoting factor
chr6	24791406	24795853	+	24791310	24795853	A5SS	0.5	50	50	ENSMUST00000202569.4	ENSMUSG00000029682.6	Spam1	chr6	protein_coding	sperm adhesion molecule 1
chr6	24890593	24891232	+	24877949	24891232	A5SS	0.5	50	50	ENSMUST00000200968.4	ENSMUSG00000029678.9	Hyal5	chr6	protein_coding	hyaluronoglucosaminidase 5
chr6	25794673	25800283	-	25794673;25798054	25798008;25800283	ES	0.5	50	50	ENSMUST00000115330.8	ENSMUSG00000029676.16	Pot1a	chr6	protein_coding	protection of telomeres 1A
chr6	25800509	25800702	-	25800509	25805874	A5SS	0.5	50	50	ENSMUST00000115330.8	ENSMUSG00000029676.16	Pot1a	chr6	protein_coding	protection of telomeres 1A
chr6	25794673	25800283	-	25794673	25798008	5pMXE	0.5	50	50	ENSMUST00000166445.8	ENSMUSG00000029676.16	Pot1a	chr6	protein_coding	protection of telomeres 1A
chr6	25955917	25957998	+	25955917	25972672	A3SS	0.5	50	50	ENSMUST00000201324.2	ENSMUSG00000106799.2	Gm20756	chr6	lncRNA	predicted gene, 20756
chr6	28126425	28134964	-	28126425	28134298	5pMXE	0.25	50	50	ENSMUST00000115323.8	ENSMUSG00000024211.16	Grm8	chr6	protein_coding	glutamate receptor, metabotropic 8
chr6	27940009	27981182	-	27762496	27981182	A3SS	0.5	50	50	ENSMUST00000115323.8	ENSMUSG00000024211.16	Grm8	chr6	protein_coding	glutamate receptor, metabotropic 8
chr6	27275693	27285734	-	27275693	27285679	A5SS	0.5	50	50	ENSMUST00000115323.8	ENSMUSG00000024211.16	Grm8	chr6	protein_coding	glutamate receptor, metabotropic 8
chr6	28126425	28132960	-	28126425	28134298	A5SS	0.25	50	50	ENSMUST00000115323.8	ENSMUSG00000024211.16	Grm8	chr6	protein_coding	glutamate receptor, metabotropic 8
chr6	28126425	28133269	-	28126425	28134298	A5SS	0.25	50	50	ENSMUST00000115323.8	ENSMUSG00000024211.16	Grm8	chr6	protein_coding	glutamate receptor, metabotropic 8
chr6	28126425	28134964	-	28126425	28133269	5pMXE	0.25	50	50	ENSMUST00000131897.2	ENSMUSG00000024211.16	Grm8	chr6	protein_coding	glutamate receptor, metabotropic 8
chr6	28126425	28132960	-	28126425	28133269	A5SS	0.25	50	50	ENSMUST00000131897.2	ENSMUSG00000024211.16	Grm8	chr6	protein_coding	glutamate receptor, metabotropic 8
chr6	28126425	28132960	-	28126425	28134964	A5SS	0.25	50	50	ENSMUST00000146727.2	ENSMUSG00000024211.16	Grm8	chr6	protein_coding	glutamate receptor, metabotropic 8
chr6	28215765	28217520	+	28215765	28260443	A3SS	0.5	50	50	ENSMUST00000143099.2	ENSMUSG00000043340.4	6530409C15Rik	chr6	lncRNA	RIKEN cDNA 6530409C15 gene
chr6	28260835	28312506	-	28260835	28261377	5pMXE	0.2	50	50	ENSMUST00000115320.8	ENSMUSG00000039841.15	Zfp800	chr6	protein_coding	zinc finger protein 800
chr6	28260835	28261295	-	28260835	28261377	A5SS	0.2	50	50	ENSMUST00000115320.8	ENSMUSG00000039841.15	Zfp800	chr6	protein_coding	zinc finger protein 800
chr6	28260835	28261479	-	28260835	28261377	A5SS	0.2	50	50	ENSMUST00000115320.8	ENSMUSG00000039841.15	Zfp800	chr6	protein_coding	zinc finger protein 800
chr6	28260835	28261767	-	28260835	28261377	A5SS	0.2	50	50	ENSMUST00000115320.8	ENSMUSG00000039841.15	Zfp800	chr6	protein_coding	zinc finger protein 800
chr6	28260835	28261295	-	28260835	28312506	A5SS	0.2	50	50	ENSMUST00000035930.11	ENSMUSG00000039841.15	Zfp800	chr6	protein_coding	zinc finger protein 800
chr6	28260835	28261479	-	28260835	28312506	A5SS	0.2	50	50	ENSMUST00000035930.11	ENSMUSG00000039841.15	Zfp800	chr6	protein_coding	zinc finger protein 800
chr6	28260835	28261767	-	28260835	28312506	A5SS	0.2	50	50	ENSMUST00000035930.11	ENSMUSG00000039841.15	Zfp800	chr6	protein_coding	zinc finger protein 800
chr6	28260835	28261295	-	28260835	28261479	A5SS	0.2	50	50	ENSMUST00000115321.9	ENSMUSG00000039841.15	Zfp800	chr6	protein_coding	zinc finger protein 800
chr6	28260835	28261767	-	28260835	28261479	A5SS	0.2	50	50	ENSMUST00000115321.9	ENSMUSG00000039841.15	Zfp800	chr6	protein_coding	zinc finger protein 800
chr6	28260835	28261767	-	28260835	28261295	A5SS	0.2	50	50	ENSMUST00000123098.8	ENSMUSG00000039841.15	Zfp800	chr6	protein_coding	zinc finger protein 800
chr6	28419695	28420284	-	28419299	28420284	A3SS	0.5	50	50	ENSMUST00000090511.4	ENSMUSG00000029708.10	Gcc1	chr6	protein_coding	golgi coiled coil 1
chr6	28421381	28423840	-	28421381	28428101	A5SS	0.5	50	50	ENSMUST00000064377.7	ENSMUSG00000029708.10	Gcc1	chr6	protein_coding	golgi coiled coil 1
chr6	28434143	28434387	+	28431630	28434387	A5SS	0.5	50	50	ENSMUST00000031719.7	ENSMUSG00000029707.7	Fscn3	chr6	protein_coding	fascin actin-bundling protein 3
chr6	28444885	28445784	-	28444885;28445237	28445112;28445784	ES	0.5	50	50	ENSMUST00000164519.9	ENSMUSG00000029706.16	Pax4	chr6	protein_coding	paired box 4
chr6	28443579	28443872	-	28443582	28443872	A3SS	0.5	50	50	ENSMUST00000164519.9	ENSMUSG00000029706.16	Pax4	chr6	protein_coding	paired box 4
chr6	28443927	28444338	-	28443888	28444338	A3SS	0.5	50	50	ENSMUST00000164519.9	ENSMUSG00000029706.16	Pax4	chr6	protein_coding	paired box 4
chr6	28520264	28526052	+	28520264	28523726	3pMXE	0.5	50	50	ENSMUST00000168362.2	ENSMUSG00000001424.15	Snd1	chr6	protein_coding	staphylococcal nuclease and tudor domain containing 1
chr6	28480641	28512834	+	28475206	28512834	A5SS	0.5	50	50	ENSMUST00000168362.2	ENSMUSG00000001424.15	Snd1	chr6	protein_coding	staphylococcal nuclease and tudor domain containing 1
chr6	28875048	28880196	+	28875048	28876141	3pMXE	0.5	50	50	ENSMUST00000164915.8	ENSMUSG00000001424.15	Snd1	chr6	protein_coding	staphylococcal nuclease and tudor domain containing 1
chr6	28520264;28523804	28523726;28526052	+	28520264	28526052	cassetteExon	0.5	100	100	ENSMUST00000164915.8	ENSMUSG00000001424.15	Snd1	chr6	protein_coding	staphylococcal nuclease and tudor domain containing 1
chr6	28561870	28626099	+	28545597	28626099	A5SS	0.5	50	50	ENSMUST00000164915.8	ENSMUSG00000001424.15	Snd1	chr6	protein_coding	staphylococcal nuclease and tudor domain containing 1
chr6	28704963	28707033	+	28668657	28707033	A5SS	0.33	50	50	ENSMUST00000164915.8	ENSMUSG00000001424.15	Snd1	chr6	protein_coding	staphylococcal nuclease and tudor domain containing 1
chr6	28705854	28707033	+	28668657	28707033	A5SS	0.33	50	50	ENSMUST00000164915.8	ENSMUSG00000001424.15	Snd1	chr6	protein_coding	staphylococcal nuclease and tudor domain containing 1
chr6	28764788	28795828	+	28745325	28795828	A5SS	0.33	50	50	ENSMUST00000164915.8	ENSMUSG00000001424.15	Snd1	chr6	protein_coding	staphylococcal nuclease and tudor domain containing 1
chr6	28776602	28795828	+	28745325	28795828	A5SS	0.33	50	50	ENSMUST00000164915.8	ENSMUSG00000001424.15	Snd1	chr6	protein_coding	staphylococcal nuclease and tudor domain containing 1
chr6	28848970	28874860	+	28795937	28874860	A5SS	0.5	50	50	ENSMUST00000164915.8	ENSMUSG00000001424.15	Snd1	chr6	protein_coding	staphylococcal nuclease and tudor domain containing 1
chr6	28795937	28874860	+	28795937	28933366	A3SS	0.5	50	50	ENSMUST00000167201.2	ENSMUSG00000001424.15	Snd1	chr6	protein_coding	staphylococcal nuclease and tudor domain containing 1
chr6	28705854	28707033	+	28704963	28707033	A5SS	0.33	50	50	ENSMUST00000163772.2	ENSMUSG00000001424.15	Snd1	chr6	protein_coding	staphylococcal nuclease and tudor domain containing 1
chr6	28776602	28795828	+	28764788	28795828	A5SS	0.33	50	50	ENSMUST00000171195.8	ENSMUSG00000001424.15	Snd1	chr6	protein_coding	staphylococcal nuclease and tudor domain containing 1
chr6	29065555	29068920	+	29060247	29068920	A5SS	0.5	50	50	ENSMUST00000069789.12	ENSMUSG00000059201.13	Lep	chr6	protein_coding	leptin
chr6	29125523	29128428	-	29125523;29127899	29127797;29128428	ES	0.5	50	50	ENSMUST00000007993.16	ENSMUSG00000029701.16	Rbm28	chr6	protein_coding	RNA binding motif protein 28
chr6	29206511	29207094	-	29206511;29206996	29206922;29207094	ES	0.5	50	50	ENSMUST00000162739.8	ENSMUSG00000003500.14	Impdh1	chr6	protein_coding	inosine monophosphate dehydrogenase 1
chr6	29201218;29201903	29201887;29202446	-	29201218	29202446	cassetteExon	0.5	100	100	ENSMUST00000162739.8	ENSMUSG00000003500.14	Impdh1	chr6	protein_coding	inosine monophosphate dehydrogenase 1
chr6	29209267;29212166	29212068;29216071	-	29209267	29216071	cassetteExon	0.5	100	100	ENSMUST00000162739.8	ENSMUSG00000003500.14	Impdh1	chr6	protein_coding	inosine monophosphate dehydrogenase 1
chr6	29209267;29212169	29212068;29216071	-	29209267	29216071	cassetteExon	0.5	100	100	ENSMUST00000162739.8	ENSMUSG00000003500.14	Impdh1	chr6	protein_coding	inosine monophosphate dehydrogenase 1
chr6	29206152	29206374	-	29206152	29206305	A5SS	0.5	50	50	ENSMUST00000162739.8	ENSMUSG00000003500.14	Impdh1	chr6	protein_coding	inosine monophosphate dehydrogenase 1
chr6	29209267	29216071	-	29209267	29212068	5pMXE	0.5	50	50	ENSMUST00000160878.8	ENSMUSG00000003500.14	Impdh1	chr6	protein_coding	inosine monophosphate dehydrogenase 1
chr6	29212169	29216071	-	29212166	29216071	A3SS	0.33	50	50	ENSMUST00000159124.8	ENSMUSG00000003500.14	Impdh1	chr6	protein_coding	inosine monophosphate dehydrogenase 1
chr6	29212169	29215830	-	29212169	29216071	A5SS	0.5	50	50	ENSMUST00000162099.8	ENSMUSG00000003500.14	Impdh1	chr6	protein_coding	inosine monophosphate dehydrogenase 1
chr6	29206511	29207094	-	29206996	29207094	3pMXE	0.5	50	50	ENSMUST00000160613.2	ENSMUSG00000003500.14	Impdh1	chr6	protein_coding	inosine monophosphate dehydrogenase 1
chr6	29272809	29274649	+	29272607	29274649	A5SS	0.5	50	50	ENSMUST00000115289.2	ENSMUSG00000043421.9	Hilpda	chr6	protein_coding	hypoxia inducible lipid droplet associated
chr6	29281416	29283157	+	29279687	29283157	A5SS	0.5	50	50	ENSMUST00000167131.8	ENSMUSG00000079652.9	Fam71f2	chr6	protein_coding	family with sequence similarity 71, member F2
chr6	29281416	29285878	+	29283338	29285878	A5SS&ES	0.5	50	50	ENSMUST00000167131.8	ENSMUSG00000079652.9	Fam71f2	chr6	protein_coding	family with sequence similarity 71, member F2
chr6	29281416	29285878	+	29281416;29283338	29283157;29285878	ES	0.5	50	50	ENSMUST00000115286.4	ENSMUSG00000079652.9	Fam71f2	chr6	protein_coding	family with sequence similarity 71, member F2
chr6	29319446;29320811	29320627;29323711	+	29319446	29323711	cassetteExon	0.5	100	100	ENSMUST00000168771.8	ENSMUSG00000039742.16	Fam71f1	chr6	protein_coding	family with sequence similarity 71, member F1
chr6	29319446;29320811	29320632;29323711	+	29319446	29323711	cassetteExon	0.5	100	100	ENSMUST00000168771.8	ENSMUSG00000039742.16	Fam71f1	chr6	protein_coding	family with sequence similarity 71, member F1
chr6	29319446	29320632	+	29319446	29320627	A3SS	0.33	50	50	ENSMUST00000090487.12	ENSMUSG00000039742.16	Fam71f1	chr6	protein_coding	family with sequence similarity 71, member F1
chr6	29326693	29330642	+	29326693	29330651	A3SS	0.33	50	50	ENSMUST00000090487.12	ENSMUSG00000039742.16	Fam71f1	chr6	protein_coding	family with sequence similarity 71, member F1
chr6	29326693	29330648	+	29326693	29330651	A3SS	0.33	50	50	ENSMUST00000090487.12	ENSMUSG00000039742.16	Fam71f1	chr6	protein_coding	family with sequence similarity 71, member F1
chr6	29326693	29330648	+	29326693	29330642	A3SS	0.33	50	50	ENSMUST00000164560.8	ENSMUSG00000039742.16	Fam71f1	chr6	protein_coding	family with sequence similarity 71, member F1
chr6	29366976	29374398	+	29366976;29372669	29372470;29374398	ES	0.33	50	50	ENSMUST00000173216.8	ENSMUSG00000029767.17	Calu	chr6	protein_coding	calumenin
chr6	29348207	29356470	+	29348207	29366039	A3SS	0.5	50	50	ENSMUST00000173216.8	ENSMUSG00000029767.17	Calu	chr6	protein_coding	calumenin
chr6	29361486	29366039	+	29348207	29366039	A5SS	0.33	50	50	ENSMUST00000173216.8	ENSMUSG00000029767.17	Calu	chr6	protein_coding	calumenin
chr6	29361752	29366039	+	29348207	29366039	A5SS	0.33	50	50	ENSMUST00000173216.8	ENSMUSG00000029767.17	Calu	chr6	protein_coding	calumenin
chr6	29373793	29374398	+	29372669	29374398	A5SS	0.33	50	50	ENSMUST00000173216.8	ENSMUSG00000029767.17	Calu	chr6	protein_coding	calumenin
chr6	29356696	29361559	+	29356696	29361293	A3SS&ES	0.5	50	50	ENSMUST00000173694.5	ENSMUSG00000029767.17	Calu	chr6	protein_coding	calumenin
chr6	29366976	29374398	+	29372669	29374398	A5SS&ES	0.33	50	50	ENSMUST00000173694.5	ENSMUSG00000029767.17	Calu	chr6	protein_coding	calumenin
chr6	29356696;29361752	29361559;29366039	+	29356696;29361486	29361293;29366039	MXE	0.5	100	100	ENSMUST00000172974.8	ENSMUSG00000029767.17	Calu	chr6	protein_coding	calumenin
chr6	29361486;29361752	29361559;29366039	+	29361486	29366039	cassetteExon	0.5	100	100	ENSMUST00000172974.8	ENSMUSG00000029767.17	Calu	chr6	protein_coding	calumenin
chr6	29373793	29374398	+	29366976	29374398	A5SS	0.33	50	50	ENSMUST00000172974.8	ENSMUSG00000029767.17	Calu	chr6	protein_coding	calumenin
chr6	29356696;29361486	29361293;29361559	+	29356696	29361559	cassetteExon	0.5	100	100	ENSMUST00000090481.14	ENSMUSG00000029767.17	Calu	chr6	protein_coding	calumenin
chr6	29366976	29374398	+	29366976	29372470	3pMXE	0.5	50	50	ENSMUST00000156163.2	ENSMUSG00000029767.17	Calu	chr6	protein_coding	calumenin
chr6	29379886	29388345	-	29379886	29380069	5pMXE	0.5	50	50	ENSMUST00000080428.13	ENSMUSG00000058831.14	Opn1sw	chr6	protein_coding	opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)
chr6	29378060	29378919	-	29378060	29378730	A5SS	0.5	50	50	ENSMUST00000080428.13	ENSMUSG00000058831.14	Opn1sw	chr6	protein_coding	opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)
chr6	29378969	29379298	-	29378969	29379322	A5SS	0.5	50	50	ENSMUST00000080428.13	ENSMUSG00000058831.14	Opn1sw	chr6	protein_coding	opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)
chr6	29396741	29397478	+	29396334	29397478	A5SS	0.5	50	50	ENSMUST00000132232.2	ENSMUSG00000029769.17	Ccdc136	chr6	protein_coding	coiled-coil domain containing 136
chr6	29399033	29399200	+	29397585	29399200	A5SS	0.5	50	50	ENSMUST00000132232.2	ENSMUSG00000029769.17	Ccdc136	chr6	protein_coding	coiled-coil domain containing 136
chr6	29411384;29422096	29421990;29426624	+	29411384;29418152	29411709;29426624	MXE	0.5	100	100	ENSMUST00000115275.8	ENSMUSG00000029769.17	Ccdc136	chr6	protein_coding	coiled-coil domain containing 136
chr6	29414979;29422096	29421990;29426624	+	29414979;29418152	29415430;29426624	MXE	0.5	100	100	ENSMUST00000115275.8	ENSMUSG00000029769.17	Ccdc136	chr6	protein_coding	coiled-coil domain containing 136
chr6	29418152;29419382	29419101;29426624	+	29418152	29426624	cassetteExon	0.5	100	100	ENSMUST00000115275.8	ENSMUSG00000029769.17	Ccdc136	chr6	protein_coding	coiled-coil domain containing 136
chr6	29403024	29405870	+	29399608	29405870	A5SS	0.5	50	50	ENSMUST00000115275.8	ENSMUSG00000029769.17	Ccdc136	chr6	protein_coding	coiled-coil domain containing 136
chr6	29420264	29426624	+	29418152	29426624	A5SS	0.2	50	50	ENSMUST00000115275.8	ENSMUSG00000029769.17	Ccdc136	chr6	protein_coding	coiled-coil domain containing 136
chr6	29411384	29426624	+	29411384;29422096	29421990;29426624	ES	0.2	50	50	ENSMUST00000145310.8	ENSMUSG00000029769.17	Ccdc136	chr6	protein_coding	coiled-coil domain containing 136
chr6	29411384	29411709	+	29411384	29421990	A3SS	0.33	50	50	ENSMUST00000145310.8	ENSMUSG00000029769.17	Ccdc136	chr6	protein_coding	coiled-coil domain containing 136
chr6	29412586	29421990	+	29411384	29421990	A5SS	0.33	50	50	ENSMUST00000145310.8	ENSMUSG00000029769.17	Ccdc136	chr6	protein_coding	coiled-coil domain containing 136
chr6	29414979	29421990	+	29411384	29421990	A5SS	0.33	50	50	ENSMUST00000145310.8	ENSMUSG00000029769.17	Ccdc136	chr6	protein_coding	coiled-coil domain containing 136
chr6	29418152	29426624	+	29422096	29426624	A5SS&ES	0.2	50	50	ENSMUST00000145310.8	ENSMUSG00000029769.17	Ccdc136	chr6	protein_coding	coiled-coil domain containing 136
chr6	29419382	29426624	+	29422096	29426624	A5SS&ES	0.2	50	50	ENSMUST00000145310.8	ENSMUSG00000029769.17	Ccdc136	chr6	protein_coding	coiled-coil domain containing 136
chr6	29420264	29426624	+	29422096	29426624	A5SS&ES	0.2	50	50	ENSMUST00000145310.8	ENSMUSG00000029769.17	Ccdc136	chr6	protein_coding	coiled-coil domain containing 136
chr6	29419382	29426624	+	29419382;29420264	29419986;29426624	ES	0.2	50	50	ENSMUST00000096084.12	ENSMUSG00000029769.17	Ccdc136	chr6	protein_coding	coiled-coil domain containing 136
chr6	29411384;29422096	29421990;29426624	+	29411384;29420264	29411709;29426624	MXE	0.5	100	100	ENSMUST00000096084.12	ENSMUSG00000029769.17	Ccdc136	chr6	protein_coding	coiled-coil domain containing 136
chr6	29414979;29422096	29421990;29426624	+	29414979;29420264	29415430;29426624	MXE	0.5	100	100	ENSMUST00000096084.12	ENSMUSG00000029769.17	Ccdc136	chr6	protein_coding	coiled-coil domain containing 136
chr6	29411384;29422096	29421990;29426624	+	29411384;29419382	29411709;29426624	MXE	0.5	100	100	ENSMUST00000181464.8	ENSMUSG00000029769.17	Ccdc136	chr6	protein_coding	coiled-coil domain containing 136
chr6	29414979;29422096	29421990;29426624	+	29414979;29419382	29415430;29426624	MXE	0.5	100	100	ENSMUST00000181464.8	ENSMUSG00000029769.17	Ccdc136	chr6	protein_coding	coiled-coil domain containing 136
chr6	29411384	29411709	+	29411384	29426624	A3SS	0.33	50	50	ENSMUST00000202726.2	ENSMUSG00000029769.17	Ccdc136	chr6	protein_coding	coiled-coil domain containing 136
chr6	29418152	29426624	+	29411384	29426624	A5SS	0.2	50	50	ENSMUST00000202726.2	ENSMUSG00000029769.17	Ccdc136	chr6	protein_coding	coiled-coil domain containing 136
chr6	29419382	29426624	+	29411384	29426624	A5SS	0.2	50	50	ENSMUST00000202726.2	ENSMUSG00000029769.17	Ccdc136	chr6	protein_coding	coiled-coil domain containing 136
chr6	29420264	29426624	+	29411384	29426624	A5SS	0.2	50	50	ENSMUST00000202726.2	ENSMUSG00000029769.17	Ccdc136	chr6	protein_coding	coiled-coil domain containing 136
chr6	29414979	29421990	+	29412586	29421990	A5SS	0.33	50	50	ENSMUST00000127611.8	ENSMUSG00000029769.17	Ccdc136	chr6	protein_coding	coiled-coil domain containing 136
chr6	29414979	29415430	+	29414979	29421990	A3SS	0.5	50	50	ENSMUST00000143599.2	ENSMUSG00000029769.17	Ccdc136	chr6	protein_coding	coiled-coil domain containing 136
chr6	29452379;29452896	29452798;29453198	+	29452379	29453198	cassetteExon	0.5	100	100	ENSMUST00000101617.9	ENSMUSG00000068699.13	Flnc	chr6	protein_coding	filamin C, gamma
chr6	29468166	29470066	+	29467973	29470066	A5SS	0.33	50	50	ENSMUST00000004396.13	ENSMUSG00000004285.13	Atp6v1f	chr6	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit F
chr6	29469225	29470066	+	29467973	29470066	A5SS	0.33	50	50	ENSMUST00000004396.13	ENSMUSG00000004285.13	Atp6v1f	chr6	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit F
chr6	29468166;29469225	29468966;29470066	+	29468166	29470066	cassetteExon	0.5	100	100	ENSMUST00000143101.4	ENSMUSG00000004285.13	Atp6v1f	chr6	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit F
chr6	29482461	29482633	-	29478380	29482633	A3SS	0.5	50	50	ENSMUST00000159482.9	ENSMUSG00000059022.16	Kcp	chr6	protein_coding	kielin/chordin-like protein
chr6	29484093	29484614	-	29484093	29484788	A5SS	0.5	50	50	ENSMUST00000161276.8	ENSMUSG00000059022.16	Kcp	chr6	protein_coding	kielin/chordin-like protein
chr6	29484715	29485002	-	29484715;29484921	29484810;29485002	ES	0.5	50	50	ENSMUST00000159479.8	ENSMUSG00000059022.16	Kcp	chr6	protein_coding	kielin/chordin-like protein
chr6	29489152	29490065	-	29489149	29490065	A3SS	0.5	50	50	ENSMUST00000159479.8	ENSMUSG00000059022.16	Kcp	chr6	protein_coding	kielin/chordin-like protein
chr6	29487575	29489032	-	29487575	29489028	A5SS	0.5	50	50	ENSMUST00000159479.8	ENSMUSG00000059022.16	Kcp	chr6	protein_coding	kielin/chordin-like protein
chr6	29498513	29498956	-	29498513;29498879	29498786;29498956	ES	0.5	50	50	ENSMUST00000091391.11	ENSMUSG00000059022.16	Kcp	chr6	protein_coding	kielin/chordin-like protein
chr6	29484093;29484921	29484788;29485002	-	29484093;29484715	29484614;29485002	MXE	0.5	100	100	ENSMUST00000091391.11	ENSMUSG00000059022.16	Kcp	chr6	protein_coding	kielin/chordin-like protein
chr6	29501308	29502289	-	29501289	29502289	A3SS	0.5	50	50	ENSMUST00000091391.11	ENSMUSG00000059022.16	Kcp	chr6	protein_coding	kielin/chordin-like protein
chr6	29502974	29504232	-	29502873	29504232	A3SS	0.5	50	50	ENSMUST00000091391.11	ENSMUSG00000059022.16	Kcp	chr6	protein_coding	kielin/chordin-like protein
chr6	29502382	29502620	-	29502382	29502584	A5SS	0.5	50	50	ENSMUST00000091391.11	ENSMUSG00000059022.16	Kcp	chr6	protein_coding	kielin/chordin-like protein
chr6	29534140	29535040	+	29534140;29534592	29534534;29535040	ES	0.5	50	50	ENSMUST00000004392.12	ENSMUSG00000029771.13	Irf5	chr6	protein_coding	interferon regulatory factor 5
chr6	29528366	29531125	+	29526773	29531125	A5SS	0.33	50	50	ENSMUST00000004392.12	ENSMUSG00000029771.13	Irf5	chr6	protein_coding	interferon regulatory factor 5
chr6	29529482	29531125	+	29526773	29531125	A5SS	0.33	50	50	ENSMUST00000004392.12	ENSMUSG00000029771.13	Irf5	chr6	protein_coding	interferon regulatory factor 5
chr6	29541304	29541615	+	29536649	29541615	A5SS	0.5	50	50	ENSMUST00000167252.5	ENSMUSG00000029771.13	Irf5	chr6	protein_coding	interferon regulatory factor 5
chr6	29529482	29531125	+	29528366	29531125	A5SS	0.33	50	50	ENSMUST00000164626.8	ENSMUSG00000029771.13	Irf5	chr6	protein_coding	interferon regulatory factor 5
chr6	29589228;29599697	29599539;29609365	-	29589228	29609365	cassetteExon	0.5	100	100	ENSMUST00000115251.8	ENSMUSG00000012535.15	Tnpo3	chr6	protein_coding	transportin 3
chr6	29589228;29602022	29601957;29609365	-	29589228	29609365	cassetteExon	0.5	100	100	ENSMUST00000115251.8	ENSMUSG00000012535.15	Tnpo3	chr6	protein_coding	transportin 3
chr6	29554961	29555152	-	29554979	29555152	A3SS	0.5	50	50	ENSMUST00000115251.8	ENSMUSG00000012535.15	Tnpo3	chr6	protein_coding	transportin 3
chr6	29589228;29602022	29601957;29609365	-	29589228;29599697	29599539;29609365	MXE	0.5	100	100	ENSMUST00000170350.8	ENSMUSG00000012535.15	Tnpo3	chr6	protein_coding	transportin 3
chr6	29709997	29710589	+	29709997	29710586	A3SS	0.5	50	50	ENSMUST00000046750.14	ENSMUSG00000001763.15	Tspan33	chr6	protein_coding	tetraspanin 33
chr6	29768905;29799583	29799438;29863142	+	29768905	29863142	cassetteExon	0.5	100	100	ENSMUST00000143707.2	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29768905	29863139	+	29768905	29863142	A3SS	0.33	50	50	ENSMUST00000143707.2	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29820633	29863142	+	29768905	29863142	A5SS	0.14	50	50	ENSMUST00000143707.2	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29854138	29863142	+	29768905	29863142	A5SS	0.14	50	50	ENSMUST00000143707.2	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29859778	29863142	+	29768905	29863142	A5SS	0.14	50	50	ENSMUST00000143707.2	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29859832	29863142	+	29768905	29863142	A5SS	0.14	50	50	ENSMUST00000143707.2	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29861411	29863142	+	29768905	29863142	A5SS	0.14	50	50	ENSMUST00000143707.2	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29863250	29864162	+	29863250	29870567	A3SS	0.5	50	50	ENSMUST00000102995.9	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29865459	29870567	+	29863250	29870567	A5SS	0.5	50	50	ENSMUST00000102995.9	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29903058	29903188	+	29896415	29903188	A5SS	0.5	50	50	ENSMUST00000102995.9	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29903627	29906507	+	29903286	29906507	A5SS	0.5	50	50	ENSMUST00000102995.9	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29768905	29799438	+	29768905	29863139	A3SS	0.33	50	50	ENSMUST00000115242.9	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29854138	29863139	+	29768905	29863139	A5SS	0.33	50	50	ENSMUST00000115242.9	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29859778	29863139	+	29768905	29863139	A5SS	0.33	50	50	ENSMUST00000115242.9	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29799583	29863142	+	29799583;29820633	29820328;29863142	ES	0.14	50	50	ENSMUST00000150365.8	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29854138	29863142	+	29820633	29863142	A5SS	0.14	50	50	ENSMUST00000150365.8	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29859778	29863142	+	29820633	29863142	A5SS	0.14	50	50	ENSMUST00000150365.8	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29859832	29863142	+	29820633	29863142	A5SS	0.14	50	50	ENSMUST00000150365.8	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29861411	29863142	+	29820633	29863142	A5SS	0.14	50	50	ENSMUST00000150365.8	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29768905	29863142	+	29799583	29863142	5pMXE	0.14	50	50	ENSMUST00000143091.8	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29854138	29863142	+	29799583	29863142	A5SS	0.14	50	50	ENSMUST00000143091.8	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29859778	29863142	+	29799583	29863142	A5SS	0.14	50	50	ENSMUST00000143091.8	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29859832	29863142	+	29799583	29863142	A5SS	0.14	50	50	ENSMUST00000143091.8	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29861411	29863142	+	29799583	29863142	A5SS	0.14	50	50	ENSMUST00000143091.8	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29854138	29863142	+	29861411	29863142	A5SS&ES	0.2	50	50	ENSMUST00000125911.9	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29859778	29863142	+	29861411	29863142	A5SS&ES	0.2	50	50	ENSMUST00000125911.9	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29859832	29863142	+	29861411	29863142	A5SS&ES	0.2	50	50	ENSMUST00000125911.9	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29854138	29863139	+	29854138	29863142	A3SS	0.5	50	50	ENSMUST00000064872.13	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29859778	29863142	+	29854138	29863142	A5SS	0.14	50	50	ENSMUST00000064872.13	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29859832	29863142	+	29854138	29863142	A5SS	0.14	50	50	ENSMUST00000064872.13	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29859778	29863139	+	29854138	29863139	A5SS	0.5	50	50	ENSMUST00000152581.8	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29859778	29863139	+	29859778	29863142	A3SS	0.5	50	50	ENSMUST00000115238.10	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29859832	29863142	+	29859778	29863142	A5SS	0.14	50	50	ENSMUST00000115238.10	ENSMUSG00000029772.18	Ahcyl2	chr6	protein_coding	S-adenosylhomocysteine hydrolase-like 2
chr6	29944491	29945588	+	29944491	29953348	A3SS	0.5	50	50	ENSMUST00000151738.4	ENSMUSG00000039629.15	Strip2	chr6	protein_coding	striatin interacting protein 2
chr6	29953452	29955431	+	29953452	29955515	A3SS	0.5	50	50	ENSMUST00000151738.4	ENSMUSG00000039629.15	Strip2	chr6	protein_coding	striatin interacting protein 2
chr6	29985465;29985933	29985728;29993007	+	29985465	29993007	cassetteExon	0.5	100	100	ENSMUST00000141679.3	ENSMUSG00000045709.12	Smkr-ps	chr6	transcribed_unitary_pseudogene	smal lysine rich protein 1, pseudogene
chr6	29986385	29993007	+	29985465	29993007	A5SS	0.33	50	50	ENSMUST00000141679.3	ENSMUSG00000045709.12	Smkr-ps	chr6	transcribed_unitary_pseudogene	smal lysine rich protein 1, pseudogene
chr6	29986385	29993007	+	29985933	29993007	A5SS	0.33	50	50	ENSMUST00000124522.3	ENSMUSG00000045709.12	Smkr-ps	chr6	transcribed_unitary_pseudogene	smal lysine rich protein 1, pseudogene
chr6	29986385	29989000	+	29986385	29993007	A3SS	0.5	50	50	ENSMUST00000238560.2	ENSMUSG00000045709.12	Smkr-ps	chr6	transcribed_unitary_pseudogene	smal lysine rich protein 1, pseudogene
chr6	30048112	30089914	+	30048112;30088987	30088832;30089914	ES	0.5	50	50	ENSMUST00000115212.8	ENSMUSG00000058440.15	Nrf1	chr6	protein_coding	nuclear respiratory factor 1
chr6	30090145;30090303	30090268;30095339	+	30090145	30095339	cassetteExon	0.5	100	100	ENSMUST00000115212.8	ENSMUSG00000058440.15	Nrf1	chr6	protein_coding	nuclear respiratory factor 1
chr6	30126358;30140270	30140215;30151513	+	30126358	30151513	cassetteExon	0.5	100	100	ENSMUST00000115212.8	ENSMUSG00000058440.15	Nrf1	chr6	protein_coding	nuclear respiratory factor 1
chr6	30048112	30089917	+	30048112	30088832	A3SS&ES	0.33	50	50	ENSMUST00000115212.8	ENSMUSG00000058440.15	Nrf1	chr6	protein_coding	nuclear respiratory factor 1
chr6	30088987	30089911	+	30088987	30089914	A3SS	0.5	50	50	ENSMUST00000115212.8	ENSMUSG00000058440.15	Nrf1	chr6	protein_coding	nuclear respiratory factor 1
chr6	30119105	30144580	+	30119105	30126234	A3SS&ES	0.5	50	50	ENSMUST00000115212.8	ENSMUSG00000058440.15	Nrf1	chr6	protein_coding	nuclear respiratory factor 1
chr6	30126358	30129180	+	30126358	30151513	A3SS	0.25	50	50	ENSMUST00000115212.8	ENSMUSG00000058440.15	Nrf1	chr6	protein_coding	nuclear respiratory factor 1
chr6	30126358	30144580	+	30126358	30151513	A3SS	0.25	50	50	ENSMUST00000115212.8	ENSMUSG00000058440.15	Nrf1	chr6	protein_coding	nuclear respiratory factor 1
chr6	30048355	30088832	+	30048112	30088832	A5SS	0.33	50	50	ENSMUST00000115212.8	ENSMUSG00000058440.15	Nrf1	chr6	protein_coding	nuclear respiratory factor 1
chr6	30076486	30088832	+	30048112	30088832	A5SS	0.33	50	50	ENSMUST00000115212.8	ENSMUSG00000058440.15	Nrf1	chr6	protein_coding	nuclear respiratory factor 1
chr6	30097999	30098448	+	30095453	30098448	A5SS	0.5	50	50	ENSMUST00000115212.8	ENSMUSG00000058440.15	Nrf1	chr6	protein_coding	nuclear respiratory factor 1
chr6	30048112	30089914	+	30048112	30088832	A3SS&ES	0.33	50	50	ENSMUST00000123194.8	ENSMUSG00000058440.15	Nrf1	chr6	protein_coding	nuclear respiratory factor 1
chr6	30119105	30144580	+	30119105;30126358	30126234;30144580	ES	0.5	50	50	ENSMUST00000115206.8	ENSMUSG00000058440.15	Nrf1	chr6	protein_coding	nuclear respiratory factor 1
chr6	30126358	30129180	+	30126358	30144580	A3SS	0.25	50	50	ENSMUST00000115206.8	ENSMUSG00000058440.15	Nrf1	chr6	protein_coding	nuclear respiratory factor 1
chr6	30126358	30140215	+	30126358	30144580	A3SS	0.25	50	50	ENSMUST00000115206.8	ENSMUSG00000058440.15	Nrf1	chr6	protein_coding	nuclear respiratory factor 1
chr6	30048112	30089917	+	30048112	30089914	A3SS	0.33	50	50	ENSMUST00000115208.8	ENSMUSG00000058440.15	Nrf1	chr6	protein_coding	nuclear respiratory factor 1
chr6	30126358	30129180	+	30126358	30140215	A3SS	0.25	50	50	ENSMUST00000115208.8	ENSMUSG00000058440.15	Nrf1	chr6	protein_coding	nuclear respiratory factor 1
chr6	30076486	30088832	+	30048355	30088832	A5SS	0.33	50	50	ENSMUST00000148990.8	ENSMUSG00000058440.15	Nrf1	chr6	protein_coding	nuclear respiratory factor 1
chr6	30090145	30095339	+	30090145	30090268	3pMXE	0.5	50	50	ENSMUST00000130096.2	ENSMUSG00000058440.15	Nrf1	chr6	protein_coding	nuclear respiratory factor 1
chr6	30126358	30151513	+	30126358	30140215	3pMXE	0.25	50	50	ENSMUST00000132866.2	ENSMUSG00000058440.15	Nrf1	chr6	protein_coding	nuclear respiratory factor 1
chr6	30241423	30260928	-	30241423;30242576	30242537;30260928	ES	0.33	50	50	ENSMUST00000102993.10	ENSMUSG00000039159.17	Ube2h	chr6	protein_coding	ubiquitin-conjugating enzyme E2H
chr6	30242576	30243680	-	30242576	30260928	A5SS	0.5	50	50	ENSMUST00000102993.10	ENSMUSG00000039159.17	Ube2h	chr6	protein_coding	ubiquitin-conjugating enzyme E2H
chr6	30221795;30241423	30241371;30260928	-	30221795	30260928	cassetteExon	0.5	100	100	ENSMUST00000094543.3	ENSMUSG00000039159.17	Ube2h	chr6	protein_coding	ubiquitin-conjugating enzyme E2H
chr6	30242576	30260928	-	30221795	30260928	A3SS	0.33	50	50	ENSMUST00000094543.3	ENSMUSG00000039159.17	Ube2h	chr6	protein_coding	ubiquitin-conjugating enzyme E2H
chr6	30305088	30307664	+	30305088	30330859	A3SS	0.5	50	50	ENSMUST00000128017.2	ENSMUSG00000084861.2	1700095J07Rik	chr6	lncRNA	RIKEN cDNA 1700095J07 gene
chr6	30370470	30373242	-	30370470;30372949	30372737;30373242	ES	0.5	50	50	ENSMUST00000080812.14	ENSMUSG00000039130.19	Zc3hc1	chr6	protein_coding	zinc finger, C3HC type 1
chr6	30366744;30369975	30369932;30370264	-	30366744	30370264	cassetteExon	0.5	100	100	ENSMUST00000080812.14	ENSMUSG00000039130.19	Zc3hc1	chr6	protein_coding	zinc finger, C3HC type 1
chr6	30373356	30374764	-	30373482	30374764	A3SS	0.5	50	50	ENSMUST00000080812.14	ENSMUSG00000039130.19	Zc3hc1	chr6	protein_coding	zinc finger, C3HC type 1
chr6	30374958	30375938	-	30374918	30375938	A3SS	0.5	50	50	ENSMUST00000080812.14	ENSMUSG00000039130.19	Zc3hc1	chr6	protein_coding	zinc finger, C3HC type 1
chr6	30376061	30381780	-	30376065	30381780	A3SS	0.5	50	50	ENSMUST00000080812.14	ENSMUSG00000039130.19	Zc3hc1	chr6	protein_coding	zinc finger, C3HC type 1
chr6	30387531	30390840	-	30387531	30390856	A5SS	0.5	50	50	ENSMUST00000080812.14	ENSMUSG00000039130.19	Zc3hc1	chr6	protein_coding	zinc finger, C3HC type 1
chr6	30370470	30373242	-	30370470	30372737	5pMXE	0.5	50	50	ENSMUST00000138983.2	ENSMUSG00000039130.19	Zc3hc1	chr6	protein_coding	zinc finger, C3HC type 1
chr6	30370470	30373242	-	30372949	30373242	3pMXE	0.5	50	50	ENSMUST00000136255.2	ENSMUSG00000039130.19	Zc3hc1	chr6	protein_coding	zinc finger, C3HC type 1
chr6	30387531	30390856	-	30381863	30390856	A3SS	0.5	50	50	ENSMUST00000136255.2	ENSMUSG00000039130.19	Zc3hc1	chr6	protein_coding	zinc finger, C3HC type 1
chr6	30381863	30382536	-	30381863	30390856	A5SS	0.5	50	50	ENSMUST00000136255.2	ENSMUSG00000039130.19	Zc3hc1	chr6	protein_coding	zinc finger, C3HC type 1
chr6	30439864	30444426	+	30439864;30441930	30441776;30444426	ES	0.5	50	50	ENSMUST00000068240.13	ENSMUSG00000029775.15	Klhdc10	chr6	protein_coding	kelch domain containing 10
chr6	30402149;30427794	30427708;30439643	+	30402149	30439643	cassetteExon	0.5	100	100	ENSMUST00000068240.13	ENSMUSG00000029775.15	Klhdc10	chr6	protein_coding	kelch domain containing 10
chr6	30417076	30439643	+	30402149	30439643	A5SS	0.33	50	50	ENSMUST00000068240.13	ENSMUSG00000029775.15	Klhdc10	chr6	protein_coding	kelch domain containing 10
chr6	30417076	30439643	+	30427794	30439643	A5SS&ES	0.33	50	50	ENSMUST00000068259.10	ENSMUSG00000029775.15	Klhdc10	chr6	protein_coding	kelch domain containing 10
chr6	30417076	30439643	+	30417076;30427794	30427644;30439643	ES	0.5	50	50	ENSMUST00000144272.8	ENSMUSG00000029775.15	Klhdc10	chr6	protein_coding	kelch domain containing 10
chr6	30402149	30439643	+	30427794	30439643	5pMXE	0.33	50	50	ENSMUST00000135566.2	ENSMUSG00000029775.15	Klhdc10	chr6	protein_coding	kelch domain containing 10
chr6	30439864	30444426	+	30439864	30441776	3pMXE	0.5	50	50	ENSMUST00000135566.2	ENSMUSG00000029775.15	Klhdc10	chr6	protein_coding	kelch domain containing 10
chr6	30461128	30462960	+	30460250	30462960	A5SS	0.5	50	50	ENSMUST00000143687.2	ENSMUSG00000085470.2	1700012C14Rik	chr6	lncRNA	RIKEN cDNA 1700012C14 gene
chr6	30481136	30487374	-	30481136;30482984	30482595;30487374	ES	0.5	50	50	ENSMUST00000151187.8	ENSMUSG00000029782.21	Tmem209	chr6	protein_coding	transmembrane protein 209
chr6	30491183	30494737	-	30491183;30492721	30492596;30494737	ES	0.5	50	50	ENSMUST00000151187.8	ENSMUSG00000029782.21	Tmem209	chr6	protein_coding	transmembrane protein 209
chr6	30505973	30508453	-	30505973;30506916	30506785;30508453	ES	0.5	50	50	ENSMUST00000151187.8	ENSMUSG00000029782.21	Tmem209	chr6	protein_coding	transmembrane protein 209
chr6	30508511	30509684	-	30508511;30508801	30508790;30509684	ES	0.33	50	50	ENSMUST00000151187.8	ENSMUSG00000029782.21	Tmem209	chr6	protein_coding	transmembrane protein 209
chr6	30508841	30509684	-	30508801	30509684	A3SS	0.33	50	50	ENSMUST00000151187.8	ENSMUSG00000029782.21	Tmem209	chr6	protein_coding	transmembrane protein 209
chr6	30481136	30482856	-	30481136	30482595	A5SS	0.33	50	50	ENSMUST00000151187.8	ENSMUSG00000029782.21	Tmem209	chr6	protein_coding	transmembrane protein 209
chr6	30508511	30508665	-	30508511	30508790	A5SS	0.33	50	50	ENSMUST00000151187.8	ENSMUSG00000029782.21	Tmem209	chr6	protein_coding	transmembrane protein 209
chr6	30508511	30509684	-	30508511;30508801	30508665;30509684	ES	0.33	50	50	ENSMUST00000064330.13	ENSMUSG00000029782.21	Tmem209	chr6	protein_coding	transmembrane protein 209
chr6	30481136;30482984	30482856;30487374	-	30481136	30487374	cassetteExon	0.5	100	100	ENSMUST00000064330.13	ENSMUSG00000029782.21	Tmem209	chr6	protein_coding	transmembrane protein 209
chr6	30494833	30497166	-	30489589	30497166	A3SS	0.5	50	50	ENSMUST00000064330.13	ENSMUSG00000029782.21	Tmem209	chr6	protein_coding	transmembrane protein 209
chr6	30489589	30491086	-	30489589	30497166	A5SS	0.5	50	50	ENSMUST00000064330.13	ENSMUSG00000029782.21	Tmem209	chr6	protein_coding	transmembrane protein 209
chr6	30481136	30487374	-	30482984	30487374	3pMXE	0.5	50	50	ENSMUST00000115160.10	ENSMUSG00000029782.21	Tmem209	chr6	protein_coding	transmembrane protein 209
chr6	30508511	30509684	-	30508511;30508841	30508665;30509684	ES	0.33	50	50	ENSMUST00000115157.8	ENSMUSG00000029782.21	Tmem209	chr6	protein_coding	transmembrane protein 209
chr6	30508511;30508841	30508790;30509684	-	30508511	30509684	cassetteExon	0.5	100	100	ENSMUST00000154547.3	ENSMUSG00000029782.21	Tmem209	chr6	protein_coding	transmembrane protein 209
chr6	30505973	30508453	-	30505973	30506785	A5SS	0.5	50	50	ENSMUST00000150480.2	ENSMUSG00000029782.21	Tmem209	chr6	protein_coding	transmembrane protein 209
chr6	30512541	30517504	+	30510290	30517504	A5SS	0.33	50	50	ENSMUST00000031797.11	ENSMUSG00000029784.14	Ssmem1	chr6	protein_coding	serine-rich single-pass membrane protein 1
chr6	30513905	30517504	+	30510290	30517504	A5SS	0.33	50	50	ENSMUST00000031797.11	ENSMUSG00000029784.14	Ssmem1	chr6	protein_coding	serine-rich single-pass membrane protein 1
chr6	30513905	30517504	+	30512541	30517504	A5SS	0.33	50	50	ENSMUST00000031798.14	ENSMUSG00000029784.14	Ssmem1	chr6	protein_coding	serine-rich single-pass membrane protein 1
chr6	30541728;30543899	30543785;30544134	+	30541728	30544134	cassetteExon	0.5	100	100	ENSMUST00000096066.5	ENSMUSG00000071553.11	Cpa2	chr6	protein_coding	carboxypeptidase A2, pancreatic
chr6	30546827	30547104	+	30545598	30547104	A5SS	0.5	50	50	ENSMUST00000096066.5	ENSMUSG00000071553.11	Cpa2	chr6	protein_coding	carboxypeptidase A2, pancreatic
chr6	30541728	30544134	+	30543899	30544134	5pMXE	0.5	50	50	ENSMUST00000142653.5	ENSMUSG00000071553.11	Cpa2	chr6	protein_coding	carboxypeptidase A2, pancreatic
chr6	30630485	30631211	+	30630485;30630862	30630778;30631211	ES	0.5	50	50	ENSMUST00000062758.11	ENSMUSG00000029788.14	Cpa5	chr6	protein_coding	carboxypeptidase A5
chr6	30626907	30630419	+	30626907	30630286	A3SS	0.5	50	50	ENSMUST00000062758.11	ENSMUSG00000029788.14	Cpa5	chr6	protein_coding	carboxypeptidase A5
chr6	30611384	30612506	+	30611442	30612506	A5SS	0.5	50	50	ENSMUST00000062758.11	ENSMUSG00000029788.14	Cpa5	chr6	protein_coding	carboxypeptidase A5
chr6	30655849	30657297	-	30655849;30656693	30656478;30657297	ES	0.5	50	50	ENSMUST00000031810.15	ENSMUSG00000029790.17	Cep41	chr6	protein_coding	centrosomal protein 41
chr6	30661013;30661854	30661722;30666266	-	30661013	30666266	cassetteExon	0.5	100	100	ENSMUST00000031810.15	ENSMUSG00000029790.17	Cep41	chr6	protein_coding	centrosomal protein 41
chr6	30666180	30666266	-	30661013	30666266	A3SS	0.33	50	50	ENSMUST00000031810.15	ENSMUSG00000029790.17	Cep41	chr6	protein_coding	centrosomal protein 41
chr6	30679443	30680130	-	30671369	30680130	A3SS	0.5	50	50	ENSMUST00000031810.15	ENSMUSG00000029790.17	Cep41	chr6	protein_coding	centrosomal protein 41
chr6	30667441	30669262	-	30667441	30671322	A5SS	0.5	50	50	ENSMUST00000031810.15	ENSMUSG00000029790.17	Cep41	chr6	protein_coding	centrosomal protein 41
chr6	30680193	30680344	-	30680193	30693636	A5SS	0.33	50	50	ENSMUST00000031810.15	ENSMUSG00000029790.17	Cep41	chr6	protein_coding	centrosomal protein 41
chr6	30680193	30692952	-	30680193	30693636	A5SS	0.33	50	50	ENSMUST00000031810.15	ENSMUSG00000029790.17	Cep41	chr6	protein_coding	centrosomal protein 41
chr6	30666180	30666266	-	30661854	30666266	A3SS	0.33	50	50	ENSMUST00000140211.8	ENSMUSG00000029790.17	Cep41	chr6	protein_coding	centrosomal protein 41
chr6	30655849	30657297	-	30655849	30656478	5pMXE	0.5	50	50	ENSMUST00000153107.2	ENSMUSG00000029790.17	Cep41	chr6	protein_coding	centrosomal protein 41
chr6	30680193	30680344	-	30680193	30692952	A5SS	0.33	50	50	ENSMUST00000140252.4	ENSMUSG00000029790.17	Cep41	chr6	protein_coding	centrosomal protein 41
chr6	30732069	30732531	+	30731679	30732531	A5SS	0.5	50	50	ENSMUST00000141130.2	ENSMUSG00000051855.16	Mest	chr6	protein_coding	mesoderm specific transcript
chr6	30723645	30731622	+	30723645	30740669	A3SS	0.5	50	50	ENSMUST00000115127.8	ENSMUSG00000051855.16	Mest	chr6	protein_coding	mesoderm specific transcript
chr6	30732748	30740669	+	30723645	30740669	A5SS	0.16	50	50	ENSMUST00000115127.8	ENSMUSG00000051855.16	Mest	chr6	protein_coding	mesoderm specific transcript
chr6	30733612	30740669	+	30723645	30740669	A5SS	0.16	50	50	ENSMUST00000115127.8	ENSMUSG00000051855.16	Mest	chr6	protein_coding	mesoderm specific transcript
chr6	30733664	30740669	+	30723645	30740669	A5SS	0.16	50	50	ENSMUST00000115127.8	ENSMUSG00000051855.16	Mest	chr6	protein_coding	mesoderm specific transcript
chr6	30738334	30740669	+	30723645	30740669	A5SS	0.16	50	50	ENSMUST00000115127.8	ENSMUSG00000051855.16	Mest	chr6	protein_coding	mesoderm specific transcript
chr6	30740342	30740669	+	30723645	30740669	A5SS	0.16	50	50	ENSMUST00000115127.8	ENSMUSG00000051855.16	Mest	chr6	protein_coding	mesoderm specific transcript
chr6	30733612	30740669	+	30732748	30740669	A5SS	0.2	50	50	ENSMUST00000151777.8	ENSMUSG00000051855.16	Mest	chr6	protein_coding	mesoderm specific transcript
chr6	30733664	30740669	+	30732748	30740669	A5SS	0.2	50	50	ENSMUST00000151777.8	ENSMUSG00000051855.16	Mest	chr6	protein_coding	mesoderm specific transcript
chr6	30738334	30740669	+	30732748	30740669	A5SS	0.2	50	50	ENSMUST00000151777.8	ENSMUSG00000051855.16	Mest	chr6	protein_coding	mesoderm specific transcript
chr6	30740342	30740669	+	30732748	30740669	A5SS	0.2	50	50	ENSMUST00000151777.8	ENSMUSG00000051855.16	Mest	chr6	protein_coding	mesoderm specific transcript
chr6	30733612	30740669	+	30733664	30740669	A5SS	0.16	50	50	ENSMUST00000147400.8	ENSMUSG00000051855.16	Mest	chr6	protein_coding	mesoderm specific transcript
chr6	30738334	30740669	+	30733664	30740669	A5SS	0.16	50	50	ENSMUST00000147400.8	ENSMUSG00000051855.16	Mest	chr6	protein_coding	mesoderm specific transcript
chr6	30740342	30740669	+	30733664	30740669	A5SS	0.16	50	50	ENSMUST00000147400.8	ENSMUSG00000051855.16	Mest	chr6	protein_coding	mesoderm specific transcript
chr6	30738334	30740669	+	30733612	30740669	A5SS	0.16	50	50	ENSMUST00000157040.8	ENSMUSG00000051855.16	Mest	chr6	protein_coding	mesoderm specific transcript
chr6	30740342	30740669	+	30733612	30740669	A5SS	0.16	50	50	ENSMUST00000157040.8	ENSMUSG00000051855.16	Mest	chr6	protein_coding	mesoderm specific transcript
chr6	30738334;30740342	30740239;30740669	+	30738334	30740669	cassetteExon	0.5	100	100	ENSMUST00000163949.9	ENSMUSG00000051855.16	Mest	chr6	protein_coding	mesoderm specific transcript
chr6	30738334	30738742	+	30738334	30740669	A3SS	0.33	50	50	ENSMUST00000163949.9	ENSMUSG00000051855.16	Mest	chr6	protein_coding	mesoderm specific transcript
chr6	30738334	30738742	+	30738334	30740239	A3SS	0.33	50	50	ENSMUST00000124665.3	ENSMUSG00000051855.16	Mest	chr6	protein_coding	mesoderm specific transcript
chr6	30803206;30835552	30835444;30835673	-	30803206	30835673	cassetteExon	0.5	100	100	ENSMUST00000048774.13	ENSMUSG00000025607.16	Copg2	chr6	protein_coding	coatomer protein complex, subunit gamma 2
chr6	30872529;30873176	30872999;30873596	-	30872529	30873596	cassetteExon	0.5	100	100	ENSMUST00000048774.13	ENSMUSG00000025607.16	Copg2	chr6	protein_coding	coatomer protein complex, subunit gamma 2
chr6	30749500	30749760	-	30749503	30749760	A3SS	0.5	50	50	ENSMUST00000048774.13	ENSMUSG00000025607.16	Copg2	chr6	protein_coding	coatomer protein complex, subunit gamma 2
chr6	30801193	30801303	-	30793773	30801303	A3SS	0.5	50	50	ENSMUST00000048774.13	ENSMUSG00000025607.16	Copg2	chr6	protein_coding	coatomer protein complex, subunit gamma 2
chr6	30872529	30873302	-	30872529	30873596	A5SS	0.33	50	50	ENSMUST00000048774.13	ENSMUSG00000025607.16	Copg2	chr6	protein_coding	coatomer protein complex, subunit gamma 2
chr6	30803206	30835673	-	30835552	30835673	3pMXE	0.5	50	50	ENSMUST00000131256.8	ENSMUSG00000025607.16	Copg2	chr6	protein_coding	coatomer protein complex, subunit gamma 2
chr6	30872529;30873176	30872999;30873302	-	30872529	30873302	cassetteExon	0.5	100	100	ENSMUST00000122833.8	ENSMUSG00000025607.16	Copg2	chr6	protein_coding	coatomer protein complex, subunit gamma 2
chr6	30873176	30873596	-	30873176	30873302	5pMXE	0.5	50	50	ENSMUST00000151973.2	ENSMUSG00000025607.16	Copg2	chr6	protein_coding	coatomer protein complex, subunit gamma 2
chr6	30872529	30873596	-	30873176	30873596	3pMXE	0.5	50	50	ENSMUST00000134137.2	ENSMUSG00000025607.16	Copg2	chr6	protein_coding	coatomer protein complex, subunit gamma 2
chr6	30879330	30884336	-	30879330	30880298	5pMXE	0.5	50	50	ENSMUST00000202703.2	ENSMUSG00000039032.3	Tsga13	chr6	protein_coding	testis specific gene A13
chr6	31064065	31064427	-	31060558	31064427	A3SS	0.5	50	50	ENSMUST00000230091.2	ENSMUSG00000044471.13	Lncpint	chr6	lncRNA	long non-protein coding RNA, Trp53 induced transcript
chr6	31064587	31068800	-	31064587	31065232	5pMXE	0.25	50	50	ENSMUST00000229076.2	ENSMUSG00000044471.13	Lncpint	chr6	lncRNA	long non-protein coding RNA, Trp53 induced transcript
chr6	31064587	31070298	-	31064587	31065232	5pMXE	0.25	50	50	ENSMUST00000229076.2	ENSMUSG00000044471.13	Lncpint	chr6	lncRNA	long non-protein coding RNA, Trp53 induced transcript
chr6	31064587	31064755	-	31064587	31065232	A5SS	0.25	50	50	ENSMUST00000229076.2	ENSMUSG00000044471.13	Lncpint	chr6	lncRNA	long non-protein coding RNA, Trp53 induced transcript
chr6	31070203	31070298	-	31064587	31070298	A3SS	0.5	50	50	ENSMUST00000229711.2	ENSMUSG00000044471.13	Lncpint	chr6	lncRNA	long non-protein coding RNA, Trp53 induced transcript
chr6	31064587	31064755	-	31064587	31070298	A5SS	0.25	50	50	ENSMUST00000229711.2	ENSMUSG00000044471.13	Lncpint	chr6	lncRNA	long non-protein coding RNA, Trp53 induced transcript
chr6	31064587	31068800	-	31064587	31070298	A5SS	0.25	50	50	ENSMUST00000229711.2	ENSMUSG00000044471.13	Lncpint	chr6	lncRNA	long non-protein coding RNA, Trp53 induced transcript
chr6	31064587	31064755	-	31064587	31068800	A5SS	0.25	50	50	ENSMUST00000230832.2	ENSMUSG00000044471.13	Lncpint	chr6	lncRNA	long non-protein coding RNA, Trp53 induced transcript
chr6	31143570;31158084	31157957;31195009	-	31143570	31195009	cassetteExon	0.5	100	100	ENSMUST00000187876.7	ENSMUSG00000044471.13	Lncpint	chr6	lncRNA	long non-protein coding RNA, Trp53 induced transcript
chr6	31174786	31195009	-	31143570	31195009	A3SS	0.33	50	50	ENSMUST00000187876.7	ENSMUSG00000044471.13	Lncpint	chr6	lncRNA	long non-protein coding RNA, Trp53 induced transcript
chr6	31158084;31174786	31174715;31195009	-	31158084	31195009	cassetteExon	0.5	100	100	ENSMUST00000231007.2	ENSMUSG00000044471.13	Lncpint	chr6	lncRNA	long non-protein coding RNA, Trp53 induced transcript
chr6	31143573	31157957	-	31143570	31157957	A3SS	0.5	50	50	ENSMUST00000231007.2	ENSMUSG00000044471.13	Lncpint	chr6	lncRNA	long non-protein coding RNA, Trp53 induced transcript
chr6	31174786	31193071	-	31174786	31195009	A5SS	0.5	50	50	ENSMUST00000115107.8	ENSMUSG00000044471.13	Lncpint	chr6	lncRNA	long non-protein coding RNA, Trp53 induced transcript
chr6	31143570	31195009	-	31158084	31195009	A3SS&ES	0.33	50	50	ENSMUST00000188611.2	ENSMUSG00000044471.13	Lncpint	chr6	lncRNA	long non-protein coding RNA, Trp53 induced transcript
chr6	31196070	31196933	-	31196070	31196996	A5SS	0.5	50	50	ENSMUST00000230209.2	ENSMUSG00000044471.13	Lncpint	chr6	lncRNA	long non-protein coding RNA, Trp53 induced transcript
chr6	31254890	31312926	+	31254890;31305295	31305267;31312926	ES	0.25	50	50	ENSMUST00000144612.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31312997	31314165	+	31312997;31313792	31313739;31314165	ES	0.5	50	50	ENSMUST00000144612.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31197454;31221293	31221040;31254783	+	31197454	31254783	cassetteExon	0.5	100	100	ENSMUST00000144612.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31197454;31262055	31261938;31312926	+	31197454;31305295	31254783;31312926	MXE	0.5	100	100	ENSMUST00000144612.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31254890;31262055	31261938;31312926	+	31254890;31305295	31305267;31312926	MXE	0.5	100	100	ENSMUST00000144612.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31197454	31226753	+	31197454	31254783	A3SS	0.2	50	50	ENSMUST00000144612.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31197454	31305224	+	31197454	31254783	A3SS&ES	0.2	50	50	ENSMUST00000144612.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31312997	31314146	+	31312997	31313739	A3SS&ES	0.33	50	50	ENSMUST00000144612.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31305324	31312926	+	31305295	31312926	A5SS	0.25	50	50	ENSMUST00000144612.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31197454	31261938	+	31197454;31254890	31254783;31261938	ES	0.25	50	50	ENSMUST00000123149.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31262055	31312926	+	31262055;31305324	31305224;31312926	ES	0.25	50	50	ENSMUST00000123149.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31197454;31221293	31221040;31261938	+	31197454;31254890	31254783;31261938	MXE	0.5	100	100	ENSMUST00000123149.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31197454;31226871	31226753;31261938	+	31197454;31254890	31254783;31261938	MXE	0.5	100	100	ENSMUST00000123149.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31254890	31305267	+	31254890	31261938	A3SS&ES	0.33	50	50	ENSMUST00000123149.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31262055	31269953	+	31262055	31305224	A3SS	0.33	50	50	ENSMUST00000123149.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31298989	31305224	+	31262055	31305224	A5SS	0.33	50	50	ENSMUST00000123149.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31221293	31261938	+	31221293;31254890	31254783;31261938	ES	0.25	50	50	ENSMUST00000155345.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31262055	31312926	+	31262055;31305295	31305224;31312926	ES	0.25	50	50	ENSMUST00000155345.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31197454;31226871	31226753;31261938	+	31197454;31254890	31221040;31261938	MXE	0.5	100	100	ENSMUST00000155345.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31197454;31254890	31254783;31312926	+	31197454;31305324	31305224;31312926	MXE	0.5	100	100	ENSMUST00000152157.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31197454;31262055	31261938;31305224	+	31197454	31305224	cassetteExon	0.5	100	100	ENSMUST00000152157.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31197454;31262055	31261938;31312926	+	31197454;31305324	31305224;31312926	MXE	0.5	100	100	ENSMUST00000152157.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31197454	31221040	+	31197454	31305224	A3SS	0.2	50	50	ENSMUST00000152157.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31197454	31226753	+	31197454	31305224	A3SS	0.2	50	50	ENSMUST00000152157.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31298989	31305224	+	31197454	31305224	A5SS	0.33	50	50	ENSMUST00000152157.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31197454;31221293	31221040;31261938	+	31197454	31261938	cassetteExon	0.5	100	100	ENSMUST00000139444.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31197454;31226871	31226753;31261938	+	31197454	31261938	cassetteExon	0.5	100	100	ENSMUST00000139444.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31197454;31254890	31254783;31312926	+	31197454;31262055	31261938;31312926	MXE	0.5	100	100	ENSMUST00000139444.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31197454;31305295	31305224;31312926	+	31197454;31262055	31261938;31312926	MXE	0.5	100	100	ENSMUST00000139444.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31262055	31269953	+	31262055	31312926	A3SS	0.33	50	50	ENSMUST00000139444.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31312997	31314146	+	31312997	31314165	A3SS	0.33	50	50	ENSMUST00000139444.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31262055	31312926	+	31262055	31305224	3pMXE	0.33	50	50	ENSMUST00000138606.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31197454;31226871	31226753;31261938	+	31197454;31221293	31221040;31261938	MXE	0.5	100	100	ENSMUST00000138606.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31197454;31254890	31254783;31312926	+	31197454;31305295	31226753;31312926	MXE	0.5	100	100	ENSMUST00000146778.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31197454;31254890	31254783;31312926	+	31197454;31305295	31261938;31312926	MXE	0.5	100	100	ENSMUST00000151076.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31197454;31305295	31305224;31312926	+	31197454;31254890	31254783;31312926	MXE	0.5	100	100	ENSMUST00000136571.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31254890;31262055	31261938;31312926	+	31254890	31312926	cassetteExon	0.5	100	100	ENSMUST00000136571.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31254890;31305324	31305267;31312926	+	31254890	31312926	cassetteExon	0.5	100	100	ENSMUST00000136571.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31197454	31261938	+	31254890	31261938	5pMXE	0.25	50	50	ENSMUST00000133510.2	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31221293	31261938	+	31254890	31261938	5pMXE	0.25	50	50	ENSMUST00000133510.2	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31226871	31261938	+	31254890	31261938	5pMXE	0.25	50	50	ENSMUST00000133510.2	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31254890	31312926	+	31262055	31312926	5pMXE	0.25	50	50	ENSMUST00000138653.8	ENSMUSG00000087380.8	2210408F21Rik	chr6	lncRNA	RIKEN cDNA 2210408F21 gene
chr6	31360329	31372633	-	31344527	31372633	A3SS	0.33	50	50	ENSMUST00000144232.8	ENSMUSG00000086212.8	Mkln1os	chr6	lncRNA	muskelin 1, intracellular mediator containing kelch motifs, opposite strand
chr6	31363240	31372633	-	31344527	31372633	A3SS	0.33	50	50	ENSMUST00000144232.8	ENSMUSG00000086212.8	Mkln1os	chr6	lncRNA	muskelin 1, intracellular mediator containing kelch motifs, opposite strand
chr6	31363240	31372633	-	31360329	31372633	A3SS	0.33	50	50	ENSMUST00000154820.8	ENSMUSG00000086212.8	Mkln1os	chr6	lncRNA	muskelin 1, intracellular mediator containing kelch motifs, opposite strand
chr6	31428519	31445066	+	31428519;31436002	31435890;31445066	ES	0.5	50	50	ENSMUST00000026699.15	ENSMUSG00000025609.16	Mkln1	chr6	protein_coding	muskelin 1, intracellular mediator containing kelch motifs
chr6	31473706	31484560	+	31473706;31476876	31476822;31484560	ES	0.5	50	50	ENSMUST00000026699.15	ENSMUSG00000025609.16	Mkln1	chr6	protein_coding	muskelin 1, intracellular mediator containing kelch motifs
chr6	31408184	31409871	+	31408184	31409874	A3SS	0.5	50	50	ENSMUST00000026699.15	ENSMUSG00000025609.16	Mkln1	chr6	protein_coding	muskelin 1, intracellular mediator containing kelch motifs
chr6	31407726	31408075	+	31405160	31408075	A5SS	0.5	50	50	ENSMUST00000026699.15	ENSMUSG00000025609.16	Mkln1	chr6	protein_coding	muskelin 1, intracellular mediator containing kelch motifs
chr6	31500154;31500471	31500363;31501240	-	31500154	31501240	cassetteExon	0.5	100	100	ENSMUST00000026698.8	ENSMUSG00000025608.10	Podxl	chr6	protein_coding	podocalyxin-like
chr6	31582387	31719888	+	31582387;31589145	31588727;31719888	ES	0.12	50	50	ENSMUST00000210190.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31582387;31648727	31648618;31719888	+	31582387;31589145	31588727;31719888	MXE	0.5	100	100	ENSMUST00000210190.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31628517	31719888	+	31589145	31719888	A5SS	0.12	50	50	ENSMUST00000210190.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31640977	31719888	+	31589145	31719888	A5SS	0.12	50	50	ENSMUST00000210190.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31680229	31719888	+	31589145	31719888	A5SS	0.12	50	50	ENSMUST00000210190.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31712581	31719888	+	31589145	31719888	A5SS	0.12	50	50	ENSMUST00000210190.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31713646	31719888	+	31589145	31719888	A5SS	0.12	50	50	ENSMUST00000210190.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31582387	31719888	+	31582387;31648727	31648618;31719888	ES	0.12	50	50	ENSMUST00000124919.8	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31648727	31769947	+	31648727	31719888	3pMXE	0.33	50	50	ENSMUST00000124919.8	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31648727	31655483	+	31648727	31719888	A3SS	0.33	50	50	ENSMUST00000124919.8	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31628517	31719888	+	31648727	31719888	A5SS&ES	0.12	50	50	ENSMUST00000124919.8	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31640977	31719888	+	31648727	31719888	A5SS&ES	0.12	50	50	ENSMUST00000124919.8	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31643424	31648618	+	31582387	31648618	A5SS	0.5	50	50	ENSMUST00000124919.8	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31680229	31719888	+	31648727	31719888	A5SS	0.12	50	50	ENSMUST00000124919.8	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31712581	31719888	+	31648727	31719888	A5SS	0.12	50	50	ENSMUST00000124919.8	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31713646	31719888	+	31648727	31719888	A5SS	0.12	50	50	ENSMUST00000124919.8	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31628517	31719888	+	31582387	31719888	A5SS	0.12	50	50	ENSMUST00000149613.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31640977	31719888	+	31582387	31719888	A5SS	0.12	50	50	ENSMUST00000149613.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31680229	31719888	+	31582387	31719888	A5SS	0.12	50	50	ENSMUST00000149613.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31712581	31719888	+	31582387	31719888	A5SS	0.12	50	50	ENSMUST00000149613.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31713646	31719888	+	31582387	31719888	A5SS	0.12	50	50	ENSMUST00000149613.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31628517	31719888	+	31628517	31638707	3pMXE	0.5	50	50	ENSMUST00000139483.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31640977	31719888	+	31628517	31719888	A5SS	0.16	50	50	ENSMUST00000209254.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31680229	31719888	+	31628517	31719888	A5SS	0.16	50	50	ENSMUST00000209254.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31712581	31719888	+	31628517	31719888	A5SS	0.16	50	50	ENSMUST00000209254.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31713646	31719888	+	31628517	31719888	A5SS	0.16	50	50	ENSMUST00000209254.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31648727	31769947	+	31720027	31769947	A5SS&ES	0.5	50	50	ENSMUST00000209659.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31680229	31719888	+	31640977	31719888	A5SS	0.12	50	50	ENSMUST00000209659.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31712581	31719888	+	31640977	31719888	A5SS	0.12	50	50	ENSMUST00000209659.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31713646	31719888	+	31640977	31719888	A5SS	0.12	50	50	ENSMUST00000209659.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31773391	31774213	+	31770044	31774213	A5SS	0.5	50	50	ENSMUST00000209659.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31643424	31655483	+	31643424	31648618	A3SS&ES	0.33	50	50	ENSMUST00000136224.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31643424	31696308	+	31643424	31648618	A3SS&ES	0.33	50	50	ENSMUST00000136224.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31643424	31655483	+	31643424;31648727	31648618;31655483	ES	0.33	50	50	ENSMUST00000209571.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31656386	31657841	+	31656386	31689725	A3SS	0.5	50	50	ENSMUST00000209571.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31648716	31655483	+	31648727	31655483	A5SS	0.33	50	50	ENSMUST00000209571.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31648727;31720027	31719888;31769947	+	31648727	31769947	cassetteExon	0.5	100	100	ENSMUST00000209658.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31648727	31655483	+	31648727	31769947	A3SS	0.33	50	50	ENSMUST00000209658.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31643424;31648716	31648618;31655483	+	31643424	31655483	cassetteExon	0.5	100	100	ENSMUST00000209562.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31643424;31648727	31648618;31719888	+	31643424;31712581	31655483;31719888	MXE	0.5	100	100	ENSMUST00000209562.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31643424	31696308	+	31643424	31655483	A3SS&ES	0.33	50	50	ENSMUST00000209562.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31689769	31695003	+	31689769	31711014	A3SS	0.5	50	50	ENSMUST00000209562.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31712581	31712681	+	31712581	31719888	A3SS	0.5	50	50	ENSMUST00000209562.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31680229	31719888	+	31712581	31719888	A5SS&ES	0.25	50	50	ENSMUST00000209562.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31697312	31712284	+	31711499	31712284	A5SS&ES	0.5	50	50	ENSMUST00000209562.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31713646	31719888	+	31712581	31719888	A5SS	0.25	50	50	ENSMUST00000209562.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31695075	31696308	+	31643424	31696308	A5SS	0.5	50	50	ENSMUST00000210387.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31713646	31719888	+	31680229	31719888	A5SS	0.12	50	50	ENSMUST00000210892.2	ENSMUSG00000086804.9	Gm43154	chr6	lncRNA	predicted gene 43154
chr6	31637089	31640769	-	31637089;31640672	31640362;31640769	ES	0.5	50	50	ENSMUST00000211663.2	ENSMUSG00000084973.3	Gm13848	chr6	lncRNA	predicted gene 13848
chr6	31637089	31640769	-	31640672	31640769	3pMXE	0.5	50	50	ENSMUST00000130777.2	ENSMUSG00000084973.3	Gm13848	chr6	lncRNA	predicted gene 13848
chr6	32028347	32035418	+	32028665	32035418	A5SS	0.33	50	50	ENSMUST00000201926.4	ENSMUSG00000029766.8	1700012A03Rik	chr6	protein_coding	RIKEN cDNA 1700012A03 gene
chr6	32035120	32035418	+	32028665	32035418	A5SS	0.33	50	50	ENSMUST00000201926.4	ENSMUSG00000029766.8	1700012A03Rik	chr6	protein_coding	RIKEN cDNA 1700012A03 gene
chr6	32035120	32035418	+	32028347	32035418	A5SS	0.33	50	50	ENSMUST00000135066.2	ENSMUSG00000029766.8	1700012A03Rik	chr6	protein_coding	RIKEN cDNA 1700012A03 gene
chr6	32280886;32287551	32287418;32293438	+	32280886;32288170	32288137;32293438	MXE	0.5	100	100	ENSMUST00000127668.2	ENSMUSG00000086720.2	Plxna4os3	chr6	lncRNA	plexin A4, opposite strand 3
chr6	32769861;32771243	32771150;32780825	-	32769861	32780825	cassetteExon	0.5	100	100	ENSMUST00000129069.8	ENSMUSG00000053768.14	Chchd3	chr6	protein_coding	coiled-coil-helix-coiled-coil-helix domain containing 3
chr6	32769861;32778219	32778113;32780825	-	32769861	32780825	cassetteExon	0.5	100	100	ENSMUST00000129069.8	ENSMUSG00000053768.14	Chchd3	chr6	protein_coding	coiled-coil-helix-coiled-coil-helix domain containing 3
chr6	32769861;32779001	32778932;32780825	-	32769861	32780825	cassetteExon	0.5	100	100	ENSMUST00000129069.8	ENSMUSG00000053768.14	Chchd3	chr6	protein_coding	coiled-coil-helix-coiled-coil-helix domain containing 3
chr6	32780960	32796503	-	32780960	32829080	A5SS	0.5	50	50	ENSMUST00000129069.8	ENSMUSG00000053768.14	Chchd3	chr6	protein_coding	coiled-coil-helix-coiled-coil-helix domain containing 3
chr6	32869310;32870341	32870327;32945136	-	32869310	32945136	cassetteExon	0.5	100	100	ENSMUST00000066379.11	ENSMUSG00000053768.14	Chchd3	chr6	protein_coding	coiled-coil-helix-coiled-coil-helix domain containing 3
chr6	32945201	32985418	-	32945253	32985418	A3SS	0.5	50	50	ENSMUST00000066379.11	ENSMUSG00000053768.14	Chchd3	chr6	protein_coding	coiled-coil-helix-coiled-coil-helix domain containing 3
chr6	32869310	32873927	-	32869310	32945136	A5SS	0.33	50	50	ENSMUST00000066379.11	ENSMUSG00000053768.14	Chchd3	chr6	protein_coding	coiled-coil-helix-coiled-coil-helix domain containing 3
chr6	32869310	32870327	-	32869310	32873927	A5SS	0.33	50	50	ENSMUST00000143206.8	ENSMUSG00000053768.14	Chchd3	chr6	protein_coding	coiled-coil-helix-coiled-coil-helix domain containing 3
chr6	32769861;32771243	32771150;32780825	-	32769861;32778219	32778113;32780825	MXE	0.5	100	100	ENSMUST00000133375.8	ENSMUSG00000053768.14	Chchd3	chr6	protein_coding	coiled-coil-helix-coiled-coil-helix domain containing 3
chr6	32769861;32779001	32778932;32780825	-	32769861;32778219	32778113;32780825	MXE	0.5	100	100	ENSMUST00000133375.8	ENSMUSG00000053768.14	Chchd3	chr6	protein_coding	coiled-coil-helix-coiled-coil-helix domain containing 3
chr6	32769861;32771243	32771150;32780825	-	32769861;32779001	32778932;32780825	MXE	0.5	100	100	ENSMUST00000125264.8	ENSMUSG00000053768.14	Chchd3	chr6	protein_coding	coiled-coil-helix-coiled-coil-helix domain containing 3
chr6	33282329	33296055	+	33282329	33309146	A3SS	0.5	50	50	ENSMUST00000052266.15	ENSMUSG00000029763.18	Exoc4	chr6	protein_coding	exocyst complex component 4
chr6	33418974	33452932	+	33418974	33556917	A3SS	0.33	50	50	ENSMUST00000052266.15	ENSMUSG00000029763.18	Exoc4	chr6	protein_coding	exocyst complex component 4
chr6	33418974	33482339	+	33418974	33556917	A3SS	0.33	50	50	ENSMUST00000052266.15	ENSMUSG00000029763.18	Exoc4	chr6	protein_coding	exocyst complex component 4
chr6	33792745	33793271	+	33792745	33815910	A3SS	0.5	50	50	ENSMUST00000052266.15	ENSMUSG00000029763.18	Exoc4	chr6	protein_coding	exocyst complex component 4
chr6	33839174	33850873	+	33839174	33887423	A3SS	0.5	50	50	ENSMUST00000052266.15	ENSMUSG00000029763.18	Exoc4	chr6	protein_coding	exocyst complex component 4
chr6	33310410	33324718	+	33309389	33324718	A5SS	0.5	50	50	ENSMUST00000052266.15	ENSMUSG00000029763.18	Exoc4	chr6	protein_coding	exocyst complex component 4
chr6	33678396	33734902	+	33557013	33734902	A5SS	0.5	50	50	ENSMUST00000052266.15	ENSMUSG00000029763.18	Exoc4	chr6	protein_coding	exocyst complex component 4
chr6	33418974	33482339	+	33418974	33452932	3pMXE	0.33	50	50	ENSMUST00000090381.11	ENSMUSG00000029763.18	Exoc4	chr6	protein_coding	exocyst complex component 4
chr6	34072554	34093324	+	34072554	34078610	3pMXE	0.5	50	50	ENSMUST00000228187.2	ENSMUSG00000056215.14	Lrguk	chr6	protein_coding	leucine-rich repeats and guanylate kinase domain containing
chr6	34020440	34023972	+	34020440	34025794	A3SS	0.5	50	50	ENSMUST00000228187.2	ENSMUSG00000056215.14	Lrguk	chr6	protein_coding	leucine-rich repeats and guanylate kinase domain containing
chr6	34020440	34023972	+	34020470	34023972	A5SS	0.5	50	50	ENSMUST00000101564.9	ENSMUSG00000056215.14	Lrguk	chr6	protein_coding	leucine-rich repeats and guanylate kinase domain containing
chr6	34147509;34149690	34149563;34153713	-	34147509	34153713	cassetteExon	0.5	100	100	ENSMUST00000019143.9	ENSMUSG00000018999.15	Slc35b4	chr6	protein_coding	solute carrier family 35, member B4
chr6	34289742;34293584	34293516;34294275	-	34289742	34294275	cassetteExon	0.5	100	100	ENSMUST00000102980.11	ENSMUSG00000001642.19	Akr1b3	chr6	protein_coding	aldo-keto reductase family 1, member B3 (aldose reductase)
chr6	34287937	34288864	-	34287937	34288857	A5SS	0.5	50	50	ENSMUST00000102980.11	ENSMUSG00000001642.19	Akr1b3	chr6	protein_coding	aldo-keto reductase family 1, member B3 (aldose reductase)
chr6	34361342	34364691	+	34361342	34364607	A3SS	0.5	50	50	ENSMUST00000038383.14	ENSMUSG00000061758.14	Akr1b10	chr6	protein_coding	aldo-keto reductase family 1, member B10 (aldose reductase)
chr6	34365827	34367015	+	34365827	34366990	A3SS	0.5	50	50	ENSMUST00000038383.14	ENSMUSG00000061758.14	Akr1b10	chr6	protein_coding	aldo-keto reductase family 1, member B10 (aldose reductase)
chr6	34398072	34419943	-	34398072;34419113	34418870;34419943	ES	0.5	50	50	ENSMUST00000150561.2	ENSMUSG00000084965.2	Gm13857	chr6	transcribed_processed_pseudogene	predicted gene 13857
chr6	34420970	34422268	-	34420190	34422268	A3SS	0.5	50	50	ENSMUST00000150561.2	ENSMUSG00000084965.2	Gm13857	chr6	transcribed_processed_pseudogene	predicted gene 13857
chr6	34453559	34464225	+	34453357	34464225	A5SS	0.25	50	50	ENSMUST00000045372.6	ENSMUSG00000038871.6	Bpgm	chr6	protein_coding	2,3-bisphosphoglycerate mutase
chr6	34453584	34464225	+	34453357	34464225	A5SS	0.25	50	50	ENSMUST00000045372.6	ENSMUSG00000038871.6	Bpgm	chr6	protein_coding	2,3-bisphosphoglycerate mutase
chr6	34454113	34464225	+	34453357	34464225	A5SS	0.25	50	50	ENSMUST00000045372.6	ENSMUSG00000038871.6	Bpgm	chr6	protein_coding	2,3-bisphosphoglycerate mutase
chr6	34453559	34464225	+	34453584	34464225	A5SS	0.25	50	50	ENSMUST00000138668.2	ENSMUSG00000038871.6	Bpgm	chr6	protein_coding	2,3-bisphosphoglycerate mutase
chr6	34454113	34464225	+	34453584	34464225	A5SS	0.25	50	50	ENSMUST00000138668.2	ENSMUSG00000038871.6	Bpgm	chr6	protein_coding	2,3-bisphosphoglycerate mutase
chr6	34454113	34464225	+	34453559	34464225	A5SS	0.25	50	50	ENSMUST00000139067.2	ENSMUSG00000038871.6	Bpgm	chr6	protein_coding	2,3-bisphosphoglycerate mutase
chr6	34575600	34662898	+	34575600;34639151	34639063;34662898	ES	0.5	50	50	ENSMUST00000079391.10	ENSMUSG00000029761.17	Cald1	chr6	protein_coding	caldesmon 1
chr6	34722950;34724904	34724821;34730378	+	34722950	34730378	cassetteExon	0.5	100	100	ENSMUST00000079391.10	ENSMUSG00000029761.17	Cald1	chr6	protein_coding	caldesmon 1
chr6	34722950;34724904	34724827;34730378	+	34722950	34730378	cassetteExon	0.5	100	100	ENSMUST00000079391.10	ENSMUSG00000029761.17	Cald1	chr6	protein_coding	caldesmon 1
chr6	34743133;34746597	34746484;34747983	+	34743133	34747983	cassetteExon	0.5	100	100	ENSMUST00000079391.10	ENSMUSG00000029761.17	Cald1	chr6	protein_coding	caldesmon 1
chr6	34730523	34732569	+	34730523	34732575	A3SS	0.5	50	50	ENSMUST00000079391.10	ENSMUSG00000029761.17	Cald1	chr6	protein_coding	caldesmon 1
chr6	34686632	34718724	+	34663009	34718724	A5SS	0.5	50	50	ENSMUST00000079391.10	ENSMUSG00000029761.17	Cald1	chr6	protein_coding	caldesmon 1
chr6	34723574	34730378	+	34722950	34730378	A5SS	0.33	50	50	ENSMUST00000079391.10	ENSMUSG00000029761.17	Cald1	chr6	protein_coding	caldesmon 1
chr6	34723574	34730378	+	34723574;34724904	34724827;34730378	ES	0.33	50	50	ENSMUST00000115027.8	ENSMUSG00000029761.17	Cald1	chr6	protein_coding	caldesmon 1
chr6	34723574	34724821	+	34723574	34724827	A3SS	0.33	50	50	ENSMUST00000115027.8	ENSMUSG00000029761.17	Cald1	chr6	protein_coding	caldesmon 1
chr6	34722950	34724827	+	34723574	34724827	A5SS	0.5	50	50	ENSMUST00000115027.8	ENSMUSG00000029761.17	Cald1	chr6	protein_coding	caldesmon 1
chr6	34722950	34730378	+	34724904	34730378	A5SS&ES	0.33	50	50	ENSMUST00000115027.8	ENSMUSG00000029761.17	Cald1	chr6	protein_coding	caldesmon 1
chr6	34575600	34662898	+	34575600	34639063	3pMXE	0.5	50	50	ENSMUST00000127055.2	ENSMUSG00000029761.17	Cald1	chr6	protein_coding	caldesmon 1
chr6	34722950	34724821	+	34722950	34724827	A3SS	0.33	50	50	ENSMUST00000031775.13	ENSMUSG00000029761.17	Cald1	chr6	protein_coding	caldesmon 1
chr6	34723574	34730378	+	34724904	34730378	A5SS&ES	0.33	50	50	ENSMUST00000031775.13	ENSMUSG00000029761.17	Cald1	chr6	protein_coding	caldesmon 1
chr6	34722950	34724821	+	34723025	34724821	A5SS	0.33	50	50	ENSMUST00000123823.8	ENSMUSG00000029761.17	Cald1	chr6	protein_coding	caldesmon 1
chr6	34723574	34724821	+	34723025	34724821	A5SS	0.33	50	50	ENSMUST00000123823.8	ENSMUSG00000029761.17	Cald1	chr6	protein_coding	caldesmon 1
chr6	34723574	34730378	+	34723574;34724904	34724821;34730378	ES	0.33	50	50	ENSMUST00000136907.8	ENSMUSG00000029761.17	Cald1	chr6	protein_coding	caldesmon 1
chr6	34722950	34724821	+	34723574	34724821	A5SS	0.33	50	50	ENSMUST00000136907.8	ENSMUSG00000029761.17	Cald1	chr6	protein_coding	caldesmon 1
chr6	34770924;34771235	34771221;34775129	+	34770924	34775129	cassetteExon	0.5	100	100	ENSMUST00000202017.4	ENSMUSG00000038836.16	Agbl3	chr6	protein_coding	ATP/GTP binding protein-like 3
chr6	34757927	34759035	+	34757994	34759035	A5SS	0.5	50	50	ENSMUST00000202017.4	ENSMUSG00000038836.16	Agbl3	chr6	protein_coding	ATP/GTP binding protein-like 3
chr6	34760528	34762126	+	34760565	34762126	A5SS	0.5	50	50	ENSMUST00000202017.4	ENSMUSG00000038836.16	Agbl3	chr6	protein_coding	ATP/GTP binding protein-like 3
chr6	34775256	34776068	+	34775267	34776068	A5SS	0.5	50	50	ENSMUST00000202017.4	ENSMUSG00000038836.16	Agbl3	chr6	protein_coding	ATP/GTP binding protein-like 3
chr6	34840275	34849463	+	34840275	34845450	3pMXE	0.5	50	50	ENSMUST00000123019.8	ENSMUSG00000057137.10	Tmem140	chr6	protein_coding	transmembrane protein 140
chr6	34844004	34845450	+	34840275	34845450	A5SS	0.5	50	50	ENSMUST00000123019.8	ENSMUSG00000057137.10	Tmem140	chr6	protein_coding	transmembrane protein 140
chr6	34840275;34845757	34845450;34849463	+	34840275	34849463	cassetteExon	0.5	100	100	ENSMUST00000074949.4	ENSMUSG00000057137.10	Tmem140	chr6	protein_coding	transmembrane protein 140
chr6	34844120	34849463	+	34840275	34849463	A5SS	0.33	50	50	ENSMUST00000074949.4	ENSMUSG00000057137.10	Tmem140	chr6	protein_coding	transmembrane protein 140
chr6	34844120	34849463	+	34845757	34849463	A5SS&ES	0.33	50	50	ENSMUST00000202010.2	ENSMUSG00000057137.10	Tmem140	chr6	protein_coding	transmembrane protein 140
chr6	34851630	34852391	-	34851630	34852472	A5SS	0.5	50	50	ENSMUST00000055097.11	ENSMUSG00000046806.14	Cyren	chr6	protein_coding	cell cycle regulator of NHEJ
chr6	34853706	34854835	-	34853706	34854510	A5SS	0.5	50	50	ENSMUST00000055097.11	ENSMUSG00000046806.14	Cyren	chr6	protein_coding	cell cycle regulator of NHEJ
chr6	34861316	34863743	-	34861316;34863113	34863001;34863743	ES	0.5	50	50	ENSMUST00000081214.12	ENSMUSG00000058486.12	Wdr91	chr6	protein_coding	WD repeat domain 91
chr6	34886475;34886762	34886612;34887632	-	34886475	34887632	cassetteExon	0.5	100	100	ENSMUST00000081214.12	ENSMUSG00000058486.12	Wdr91	chr6	protein_coding	WD repeat domain 91
chr6	34886475;34886762	34886649;34887632	-	34886475	34887632	cassetteExon	0.5	100	100	ENSMUST00000081214.12	ENSMUSG00000058486.12	Wdr91	chr6	protein_coding	WD repeat domain 91
chr6	34886475	34887441	-	34886475	34887632	A5SS	0.2	50	50	ENSMUST00000081214.12	ENSMUSG00000058486.12	Wdr91	chr6	protein_coding	WD repeat domain 91
chr6	34886475	34887445	-	34886475	34887632	A5SS	0.2	50	50	ENSMUST00000081214.12	ENSMUSG00000058486.12	Wdr91	chr6	protein_coding	WD repeat domain 91
chr6	34886475	34886612	-	34886475	34887441	A5SS	0.2	50	50	ENSMUST00000149448.8	ENSMUSG00000058486.12	Wdr91	chr6	protein_coding	WD repeat domain 91
chr6	34886475	34886649	-	34886475	34887441	A5SS	0.2	50	50	ENSMUST00000149448.8	ENSMUSG00000058486.12	Wdr91	chr6	protein_coding	WD repeat domain 91
chr6	34886475	34887445	-	34886475	34887441	A5SS	0.2	50	50	ENSMUST00000149448.8	ENSMUSG00000058486.12	Wdr91	chr6	protein_coding	WD repeat domain 91
chr6	34886475;34886762	34886612;34887445	-	34886475	34887445	cassetteExon	0.5	100	100	ENSMUST00000133336.8	ENSMUSG00000058486.12	Wdr91	chr6	protein_coding	WD repeat domain 91
chr6	34886475;34886762	34886649;34887445	-	34886475	34887445	cassetteExon	0.5	100	100	ENSMUST00000133336.8	ENSMUSG00000058486.12	Wdr91	chr6	protein_coding	WD repeat domain 91
chr6	34886762	34887632	-	34886762	34887445	5pMXE	0.5	50	50	ENSMUST00000152488.8	ENSMUSG00000058486.12	Wdr91	chr6	protein_coding	WD repeat domain 91
chr6	34886475	34886649	-	34886475	34886612	A5SS	0.25	50	50	ENSMUST00000152488.8	ENSMUSG00000058486.12	Wdr91	chr6	protein_coding	WD repeat domain 91
chr6	34886475	34887445	-	34886475	34886612	A5SS&ES	0.2	50	50	ENSMUST00000145765.2	ENSMUSG00000058486.12	Wdr91	chr6	protein_coding	WD repeat domain 91
chr6	34886475	34887445	-	34886475	34886649	A5SS&ES	0.2	50	50	ENSMUST00000134830.2	ENSMUSG00000058486.12	Wdr91	chr6	protein_coding	WD repeat domain 91
chr6	34897989	34907296	+	34897989;34904851	34904654;34907296	ES	0.33	50	50	ENSMUST00000031876.12	ENSMUSG00000029848.12	Stra8	chr6	protein_coding	stimulated by retinoic acid gene 8
chr6	34904788	34907296	+	34904851	34907296	A5SS	0.33	50	50	ENSMUST00000031876.12	ENSMUSG00000029848.12	Stra8	chr6	protein_coding	stimulated by retinoic acid gene 8
chr6	34897989	34907296	+	34897989;34904788	34904654;34907296	ES	0.33	50	50	ENSMUST00000185102.2	ENSMUSG00000029848.12	Stra8	chr6	protein_coding	stimulated by retinoic acid gene 8
chr6	34954118	34955844	-	34954118	34954741	5pMXE	0.5	50	50	ENSMUST00000044387.14	ENSMUSG00000029847.14	Slc23a4	chr6	protein_coding	solute carrier family 23 member 4
chr6	34925904	34930700	-	34923161	34930700	A3SS	0.5	50	50	ENSMUST00000044387.14	ENSMUSG00000029847.14	Slc23a4	chr6	protein_coding	solute carrier family 23 member 4
chr6	35000367;35001275	35001063;35027997	-	35000367	35027997	cassetteExon	0.5	100	100	ENSMUST00000202143.4	ENSMUSG00000038784.14	Cnot4	chr6	protein_coding	CCR4-NOT transcription complex, subunit 4
chr6	35023293	35027997	-	35000367	35027997	A3SS	0.33	50	50	ENSMUST00000202143.4	ENSMUSG00000038784.14	Cnot4	chr6	protein_coding	CCR4-NOT transcription complex, subunit 4
chr6	35033203	35041824	-	35033203	35041833	A5SS	0.5	50	50	ENSMUST00000202143.4	ENSMUSG00000038784.14	Cnot4	chr6	protein_coding	CCR4-NOT transcription complex, subunit 4
chr6	35023293	35027997	-	35001275	35027997	A3SS	0.33	50	50	ENSMUST00000114993.9	ENSMUSG00000038784.14	Cnot4	chr6	protein_coding	CCR4-NOT transcription complex, subunit 4
chr6	35057161	35110437	-	35041957	35110437	A3SS	0.5	50	50	ENSMUST00000202666.2	ENSMUSG00000038784.14	Cnot4	chr6	protein_coding	CCR4-NOT transcription complex, subunit 4
chr6	35041957	35045523	-	35041957	35110437	A5SS	0.5	50	50	ENSMUST00000202666.2	ENSMUSG00000038784.14	Cnot4	chr6	protein_coding	CCR4-NOT transcription complex, subunit 4
chr6	35182469;35183154	35183055;35185016	+	35182469	35185016	cassetteExon	0.5	100	100	ENSMUST00000201374.4	ENSMUSG00000038759.16	Nup205	chr6	protein_coding	nucleoporin 205
chr6	35154594	35160784	+	35154584	35160784	A5SS	0.5	50	50	ENSMUST00000201374.4	ENSMUSG00000038759.16	Nup205	chr6	protein_coding	nucleoporin 205
chr6	35191318	35191581	+	35191334	35191581	A5SS	0.5	50	50	ENSMUST00000201374.4	ENSMUSG00000038759.16	Nup205	chr6	protein_coding	nucleoporin 205
chr6	35229717;35229980	35229891;35237345	+	35229717	35237345	cassetteExon	0.5	100	100	ENSMUST00000152147.8	ENSMUSG00000073155.13	1810058I24Rik	chr6	protein_coding	RIKEN cDNA 1810058I24 gene
chr6	35229717	35237345	+	35229980	35237345	A5SS	0.5	50	50	ENSMUST00000136110.2	ENSMUSG00000073155.13	1810058I24Rik	chr6	protein_coding	RIKEN cDNA 1810058I24 gene
chr6	35499730	35516495	-	35499730	35516474	A5SS	0.5	50	50	ENSMUST00000031866.9	ENSMUSG00000029840.9	Mtpn	chr6	protein_coding	myotrophin
chr6	36251407	36359913	-	36251404	36359913	A3SS	0.33	50	50	ENSMUST00000101535.9	ENSMUSG00000073154.11	9330158H04Rik	chr6	lncRNA	RIKEN cDNA 9330158H04 gene
chr6	36325361	36359913	-	36251404	36359913	A3SS	0.33	50	50	ENSMUST00000101535.9	ENSMUSG00000073154.11	9330158H04Rik	chr6	lncRNA	RIKEN cDNA 9330158H04 gene
chr6	36364441	36364598	-	36360003	36364598	A3SS	0.5	50	50	ENSMUST00000101535.9	ENSMUSG00000073154.11	9330158H04Rik	chr6	lncRNA	RIKEN cDNA 9330158H04 gene
chr6	36325361	36359913	-	36251407	36359913	A3SS	0.33	50	50	ENSMUST00000161820.8	ENSMUSG00000073154.11	9330158H04Rik	chr6	lncRNA	RIKEN cDNA 9330158H04 gene
chr6	36364891	36365743	-	36364891	36365091	5pMXE	0.2	50	50	ENSMUST00000161161.8	ENSMUSG00000073154.11	9330158H04Rik	chr6	lncRNA	RIKEN cDNA 9330158H04 gene
chr6	36364891	36365878	-	36364891	36365091	5pMXE	0.2	50	50	ENSMUST00000161161.8	ENSMUSG00000073154.11	9330158H04Rik	chr6	lncRNA	RIKEN cDNA 9330158H04 gene
chr6	36364891	36366148	-	36364891	36365091	5pMXE	0.2	50	50	ENSMUST00000161161.8	ENSMUSG00000073154.11	9330158H04Rik	chr6	lncRNA	RIKEN cDNA 9330158H04 gene
chr6	36364891	36366277	-	36364891	36365091	5pMXE	0.2	50	50	ENSMUST00000161161.8	ENSMUSG00000073154.11	9330158H04Rik	chr6	lncRNA	RIKEN cDNA 9330158H04 gene
chr6	36364891	36365743	-	36364891	36366148	A5SS	0.2	50	50	ENSMUST00000160156.2	ENSMUSG00000073154.11	9330158H04Rik	chr6	lncRNA	RIKEN cDNA 9330158H04 gene
chr6	36364891	36365878	-	36364891	36366148	A5SS	0.2	50	50	ENSMUST00000160156.2	ENSMUSG00000073154.11	9330158H04Rik	chr6	lncRNA	RIKEN cDNA 9330158H04 gene
chr6	36364891	36366277	-	36364891	36366148	A5SS	0.2	50	50	ENSMUST00000160156.2	ENSMUSG00000073154.11	9330158H04Rik	chr6	lncRNA	RIKEN cDNA 9330158H04 gene
chr6	36364891	36365878	-	36364891	36365743	5pMXE	0.2	50	50	ENSMUST00000159032.2	ENSMUSG00000073154.11	9330158H04Rik	chr6	lncRNA	RIKEN cDNA 9330158H04 gene
chr6	36364891	36366277	-	36364891	36365743	5pMXE	0.2	50	50	ENSMUST00000159032.2	ENSMUSG00000073154.11	9330158H04Rik	chr6	lncRNA	RIKEN cDNA 9330158H04 gene
chr6	36364891	36365878	-	36364891	36366277	A5SS	0.2	50	50	ENSMUST00000160187.2	ENSMUSG00000073154.11	9330158H04Rik	chr6	lncRNA	RIKEN cDNA 9330158H04 gene
chr6	36365686	36421056	+	36365686	36500105	A3SS	0.5	50	50	ENSMUST00000172278.8	ENSMUSG00000045613.10	Chrm2	chr6	protein_coding	cholinergic receptor, muscarinic 2, cardiac
chr6	36897358	36914256	-	36897358;36911616	36911572;36914256	ES	0.5	50	50	ENSMUST00000101532.10	ENSMUSG00000038665.16	Dgki	chr6	protein_coding	diacylglycerol kinase, iota
chr6	36952182	36976977	-	36952182;36971856	36971794;36976977	ES	0.5	50	50	ENSMUST00000101532.10	ENSMUSG00000038665.16	Dgki	chr6	protein_coding	diacylglycerol kinase, iota
chr6	37111284;37273682	37273608;37276498	-	37111284;37126592	37126484;37276498	MXE	0.5	100	100	ENSMUST00000101532.10	ENSMUSG00000038665.16	Dgki	chr6	protein_coding	diacylglycerol kinase, iota
chr6	36889215	36890568	-	36871736	36890568	A3SS	0.5	50	50	ENSMUST00000101532.10	ENSMUSG00000038665.16	Dgki	chr6	protein_coding	diacylglycerol kinase, iota
chr6	36892463	36893356	-	36892444	36893356	A3SS	0.5	50	50	ENSMUST00000101532.10	ENSMUSG00000038665.16	Dgki	chr6	protein_coding	diacylglycerol kinase, iota
chr6	36993684	36996851	-	36993613	36996851	A3SS	0.5	50	50	ENSMUST00000101532.10	ENSMUSG00000038665.16	Dgki	chr6	protein_coding	diacylglycerol kinase, iota
chr6	37208168	37276498	-	37126592	37276498	A3SS	0.33	50	50	ENSMUST00000101532.10	ENSMUSG00000038665.16	Dgki	chr6	protein_coding	diacylglycerol kinase, iota
chr6	37006776	37007797	-	37006776	37009798	A5SS	0.5	50	50	ENSMUST00000101532.10	ENSMUSG00000038665.16	Dgki	chr6	protein_coding	diacylglycerol kinase, iota
chr6	37040948	37041346	-	37040948	37044249	A5SS	0.5	50	50	ENSMUST00000101532.10	ENSMUSG00000038665.16	Dgki	chr6	protein_coding	diacylglycerol kinase, iota
chr6	37208168	37276498	-	37273682	37276498	A3SS&ES	0.33	50	50	ENSMUST00000042075.8	ENSMUSG00000038665.16	Dgki	chr6	protein_coding	diacylglycerol kinase, iota
chr6	37313249	37313341	-	37313249	37330492	A5SS	0.5	50	50	ENSMUST00000041093.6	ENSMUSG00000038648.6	Creb3l2	chr6	protein_coding	cAMP responsive element binding protein 3-like 2
chr6	37516809	37527141	+	37513080	37527141	A5SS	0.5	50	50	ENSMUST00000040987.11	ENSMUSG00000038641.13	Akr1d1	chr6	protein_coding	aldo-keto reductase family 1, member D1
chr6	37880586;37885299	37885152;37892100	+	37880586	37892100	cassetteExon	0.5	100	100	ENSMUST00000153004.8	ENSMUSG00000029833.18	Trim24	chr6	protein_coding	tripartite motif-containing 24
chr6	37855171	37880468	+	37848409	37880468	A5SS	0.33	50	50	ENSMUST00000153004.8	ENSMUSG00000029833.18	Trim24	chr6	protein_coding	tripartite motif-containing 24
chr6	37877665	37880468	+	37848409	37880468	A5SS	0.33	50	50	ENSMUST00000153004.8	ENSMUSG00000029833.18	Trim24	chr6	protein_coding	tripartite motif-containing 24
chr6	37908435;37920465	37920348;37922456	+	37908435	37922456	cassetteExon	0.5	100	100	ENSMUST00000149828.8	ENSMUSG00000029833.18	Trim24	chr6	protein_coding	tripartite motif-containing 24
chr6	37922622	37926157	+	37922724	37926157	A5SS	0.5	50	50	ENSMUST00000031859.14	ENSMUSG00000029833.18	Trim24	chr6	protein_coding	tripartite motif-containing 24
chr6	37877665	37880468	+	37855171	37880468	A5SS	0.5	50	50	ENSMUST00000149561.8	ENSMUSG00000029833.18	Trim24	chr6	protein_coding	tripartite motif-containing 24
chr6	38003948	38007954	-	38003948;38006650	38006526;38007954	ES	0.5	50	50	ENSMUST00000096040.11	ENSMUSG00000029830.16	Svopl	chr6	protein_coding	SV2 related protein homolog (rat)-like
chr6	38071006	38073783	-	38071006	38101263	A5SS	0.5	50	50	ENSMUST00000040259.8	ENSMUSG00000038600.13	Atp6v0a4	chr6	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit A4
chr6	38105462	38107717	-	38105510	38107717	A3SS	0.5	50	50	ENSMUST00000117556.8	ENSMUSG00000063455.17	D630045J12Rik	chr6	protein_coding	RIKEN cDNA D630045J12 gene
chr6	38113926	38116358	-	38113929	38116358	A3SS	0.5	50	50	ENSMUST00000117556.8	ENSMUSG00000063455.17	D630045J12Rik	chr6	protein_coding	RIKEN cDNA D630045J12 gene
chr6	38308796	38309425	-	38308796	38309077	A5SS	0.5	50	50	ENSMUST00000114900.8	ENSMUSG00000029826.15	Zc3hav1	chr6	protein_coding	zinc finger CCCH type, antiviral 1
chr6	38362460	38366917	+	38362460;38364646	38364532;38366917	ES	0.33	50	50	ENSMUST00000162554.8	ENSMUSG00000056832.15	Ttc26	chr6	protein_coding	tetratricopeptide repeat domain 26
chr6	38382935	38387709	+	38382935;38386438	38386350;38387709	ES	0.5	50	50	ENSMUST00000162554.8	ENSMUSG00000056832.15	Ttc26	chr6	protein_coding	tetratricopeptide repeat domain 26
chr6	38364646;38366225	38366035;38366917	+	38364646	38366917	cassetteExon	0.5	100	100	ENSMUST00000162554.8	ENSMUSG00000056832.15	Ttc26	chr6	protein_coding	tetratricopeptide repeat domain 26
chr6	38366966	38368390	+	38366966	38368354	A3SS	0.5	50	50	ENSMUST00000162554.8	ENSMUSG00000056832.15	Ttc26	chr6	protein_coding	tetratricopeptide repeat domain 26
chr6	38366225	38366917	+	38362460	38366917	A5SS	0.33	50	50	ENSMUST00000160215.2	ENSMUSG00000056832.15	Ttc26	chr6	protein_coding	tetratricopeptide repeat domain 26
chr6	38464085;38466239	38466189;38467319	+	38464085	38467319	cassetteExon	0.5	100	100	ENSMUST00000160583.8	ENSMUSG00000038538.18	Ubn2	chr6	protein_coding	ubinuclein 2
chr6	38440984	38447087	+	38440978	38447087	A5SS	0.5	50	50	ENSMUST00000160583.8	ENSMUSG00000038538.18	Ubn2	chr6	protein_coding	ubinuclein 2
chr6	38468866	38475623	+	38468866	38499095	A3SS	0.33	50	50	ENSMUST00000162593.2	ENSMUSG00000038538.18	Ubn2	chr6	protein_coding	ubinuclein 2
chr6	38468866	38499236	+	38468866	38499095	A3SS	0.33	50	50	ENSMUST00000162593.2	ENSMUSG00000038538.18	Ubn2	chr6	protein_coding	ubinuclein 2
chr6	38468866	38475623	+	38468866	38499236	A3SS	0.33	50	50	ENSMUST00000159447.2	ENSMUSG00000038538.18	Ubn2	chr6	protein_coding	ubinuclein 2
chr6	38511945	38516094	+	38510646	38516094	A5SS	0.5	50	50	ENSMUST00000147651.2	ENSMUSG00000019689.5	Fmc1	chr6	protein_coding	formation of mitochondrial complex V assembly factor 1
chr6	38528843	38547445	+	38528843;38531998	38531915;38547445	ES	0.33	50	50	ENSMUST00000163047.8	ENSMUSG00000029823.17	Luc7l2	chr6	protein_coding	LUC7-like 2 (S. cerevisiae)
chr6	38531998;38545852	38545782;38547445	+	38531998	38547445	cassetteExon	0.5	100	100	ENSMUST00000163047.8	ENSMUSG00000029823.17	Luc7l2	chr6	protein_coding	LUC7-like 2 (S. cerevisiae)
chr6	38547539;38548023	38547977;38561976	+	38547539	38561976	cassetteExon	0.5	100	100	ENSMUST00000163047.8	ENSMUSG00000029823.17	Luc7l2	chr6	protein_coding	LUC7-like 2 (S. cerevisiae)
chr6	38570404;38575749	38575720;38580212	+	38570404	38580212	cassetteExon	0.5	100	100	ENSMUST00000163047.8	ENSMUSG00000029823.17	Luc7l2	chr6	protein_coding	LUC7-like 2 (S. cerevisiae)
chr6	38528843	38536139	+	38528843	38531915	A3SS&ES	0.33	50	50	ENSMUST00000163047.8	ENSMUSG00000029823.17	Luc7l2	chr6	protein_coding	LUC7-like 2 (S. cerevisiae)
chr6	38528843	38536139	+	38528843	38547445	A3SS	0.33	50	50	ENSMUST00000161538.8	ENSMUSG00000029823.17	Luc7l2	chr6	protein_coding	LUC7-like 2 (S. cerevisiae)
chr6	38545852	38547445	+	38528843	38547445	A5SS	0.33	50	50	ENSMUST00000161538.8	ENSMUSG00000029823.17	Luc7l2	chr6	protein_coding	LUC7-like 2 (S. cerevisiae)
chr6	38528843;38531998	38531915;38545782	+	38528843;38542657	38536139;38545782	MXE	0.5	100	100	ENSMUST00000162386.8	ENSMUSG00000029823.17	Luc7l2	chr6	protein_coding	LUC7-like 2 (S. cerevisiae)
chr6	38528843;38531998	38531915;38547445	+	38528843;38545852	38536139;38547445	MXE	0.5	100	100	ENSMUST00000162386.8	ENSMUSG00000029823.17	Luc7l2	chr6	protein_coding	LUC7-like 2 (S. cerevisiae)
chr6	38535010	38536139	+	38528843	38536139	A5SS	0.5	50	50	ENSMUST00000162386.8	ENSMUSG00000029823.17	Luc7l2	chr6	protein_coding	LUC7-like 2 (S. cerevisiae)
chr6	38528843	38547445	+	38528843	38531915	3pMXE	0.33	50	50	ENSMUST00000160922.5	ENSMUSG00000029823.17	Luc7l2	chr6	protein_coding	LUC7-like 2 (S. cerevisiae)
chr6	38542657	38545782	+	38531998	38545782	A5SS	0.5	50	50	ENSMUST00000160582.2	ENSMUSG00000029823.17	Luc7l2	chr6	protein_coding	LUC7-like 2 (S. cerevisiae)
chr6	38607317	38613311	-	38607317;38608792	38608623;38613311	ES	0.5	50	50	ENSMUST00000202245.4	ENSMUSG00000071537.7	Klrg2	chr6	protein_coding	killer cell lectin-like receptor subfamily G, member 2
chr6	38640881	38650378	+	38640351	38650378	A5SS	0.5	50	50	ENSMUST00000114874.5	ENSMUSG00000079598.5	Clec2l	chr6	protein_coding	C-type lectin domain family 2, member L
chr6	38698529	38706856	-	38698532	38706856	A3SS	0.5	50	50	ENSMUST00000161779.8	ENSMUSG00000061436.16	Hipk2	chr6	protein_coding	homeodomain interacting protein kinase 2
chr6	38707930	38714293	-	38708011	38714293	A3SS	0.33	50	50	ENSMUST00000161779.8	ENSMUSG00000061436.16	Hipk2	chr6	protein_coding	homeodomain interacting protein kinase 2
chr6	38713939	38714293	-	38708011	38714293	A3SS	0.33	50	50	ENSMUST00000161779.8	ENSMUSG00000061436.16	Hipk2	chr6	protein_coding	homeodomain interacting protein kinase 2
chr6	38796248	38813931	-	38796248	38852733	A5SS	0.5	50	50	ENSMUST00000161779.8	ENSMUSG00000061436.16	Hipk2	chr6	protein_coding	homeodomain interacting protein kinase 2
chr6	38713939	38714293	-	38707930	38714293	A3SS	0.33	50	50	ENSMUST00000160962.8	ENSMUSG00000061436.16	Hipk2	chr6	protein_coding	homeodomain interacting protein kinase 2
chr6	38928864	38959055	+	38928864	38928988	3pMXE	0.5	50	50	ENSMUST00000162521.8	ENSMUSG00000029925.14	Tbxas1	chr6	protein_coding	thromboxane A synthase 1, platelet
chr6	38918381	38925476	+	38896175	38925476	A5SS	0.5	50	50	ENSMUST00000162521.8	ENSMUSG00000029925.14	Tbxas1	chr6	protein_coding	thromboxane A synthase 1, platelet
chr6	38959151;38960492	38960269;38978186	+	38959151	38978186	cassetteExon	0.5	100	100	ENSMUST00000003017.13	ENSMUSG00000029925.14	Tbxas1	chr6	protein_coding	thromboxane A synthase 1, platelet
chr6	38948919	38959055	+	38928864	38959055	A5SS	0.5	50	50	ENSMUST00000003017.13	ENSMUSG00000029925.14	Tbxas1	chr6	protein_coding	thromboxane A synthase 1, platelet
chr6	38959151	38978186	+	38959151	38960269	3pMXE	0.5	50	50	ENSMUST00000162656.2	ENSMUSG00000029925.14	Tbxas1	chr6	protein_coding	thromboxane A synthase 1, platelet
chr6	38959151	38978186	+	38960492	38978186	5pMXE	0.5	50	50	ENSMUST00000161360.2	ENSMUSG00000029925.14	Tbxas1	chr6	protein_coding	thromboxane A synthase 1, platelet
chr6	39129836	39131126	-	39129836	39135148	A5SS	0.5	50	50	ENSMUST00000002305.9	ENSMUSG00000042599.9	Kdm7a	chr6	protein_coding	lysine (K)-specific demethylase 7A
chr6	39329684	39334334	-	39329684;39332056	39331911;39334334	ES	0.5	50	50	ENSMUST00000090243.8	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39343980;39344700	39344578;39354553	-	39343980	39354553	cassetteExon	0.5	100	100	ENSMUST00000090243.8	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39343980;39349071	39349013;39354553	-	39343980	39354553	cassetteExon	0.5	100	100	ENSMUST00000090243.8	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39314076	39324223	-	39322930	39324223	A3SS&ES	0.5	50	50	ENSMUST00000090243.8	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39336912	39341437	-	39336976	39341437	A3SS	0.5	50	50	ENSMUST00000090243.8	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39349861	39354553	-	39343980	39354553	A3SS	0.25	50	50	ENSMUST00000090243.8	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39324364	39324659	-	39324364	39326274	A5SS	0.5	50	50	ENSMUST00000090243.8	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39343980	39348140	-	39343980	39354553	A5SS	0.2	50	50	ENSMUST00000090243.8	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39343980	39354169	-	39343980	39354553	A5SS	0.2	50	50	ENSMUST00000090243.8	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39343980	39349013	-	39343980;39348263	39348140;39349013	ES	0.33	50	50	ENSMUST00000200961.4	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39349071	39354169	-	39349071	39349781	5pMXE	0.33	50	50	ENSMUST00000200961.4	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39349071	39354553	-	39349071	39349781	5pMXE	0.33	50	50	ENSMUST00000200961.4	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39343980;39344700	39344578;39349013	-	39343980;39348263	39348140;39349013	MXE	0.5	100	100	ENSMUST00000200961.4	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39329684	39334334	-	39332056	39334334	3pMXE	0.5	50	50	ENSMUST00000202400.4	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39349071	39354553	-	39349071;39349861	39349781;39354553	ES	0.25	50	50	ENSMUST00000202400.4	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39343980;39344700	39344578;39349013	-	39343980	39349013	cassetteExon	0.5	100	100	ENSMUST00000202400.4	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39343980;39344700	39344578;39354553	-	39343980;39349861	39349013;39354553	MXE	0.5	100	100	ENSMUST00000202400.4	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39343980	39354169	-	39343980	39349013	A5SS&ES	0.2	50	50	ENSMUST00000202400.4	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39343980;39344700	39344578;39354553	-	39343980;39349071	39349013;39354553	MXE	0.5	100	100	ENSMUST00000202749.4	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39349071	39354169	-	39349071	39354553	A5SS	0.33	50	50	ENSMUST00000202749.4	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39343980	39354169	-	39343980	39344578	A5SS&ES	0.2	50	50	ENSMUST00000202204.4	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39344700	39354169	-	39344700	39349013	A5SS&ES	0.33	50	50	ENSMUST00000202204.4	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39343980;39344700	39344578;39354169	-	39343980	39354169	cassetteExon	0.5	100	100	ENSMUST00000200771.4	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39343980;39349071	39349013;39354169	-	39343980	39354169	cassetteExon	0.5	100	100	ENSMUST00000200771.4	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39343980	39348140	-	39343980	39354169	A5SS	0.2	50	50	ENSMUST00000200771.4	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39344700;39349071	39349013;39354553	-	39344700	39354553	cassetteExon	0.5	100	100	ENSMUST00000202952.2	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39349861	39354553	-	39344700	39354553	A3SS	0.25	50	50	ENSMUST00000202952.2	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39343980	39348140	-	39343980	39344578	A5SS&ES	0.2	50	50	ENSMUST00000202952.2	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39344700	39354169	-	39344700	39354553	A5SS	0.33	50	50	ENSMUST00000202952.2	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39343980	39349013	-	39344700	39349013	3pMXE	0.33	50	50	ENSMUST00000202928.2	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39344700	39354169	-	39344700;39349071	39349013;39354169	ES	0.5	50	50	ENSMUST00000202928.2	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39348263	39349013	-	39344700	39349013	A3SS	0.33	50	50	ENSMUST00000202928.2	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39344700	39354553	-	39344700	39349013	A5SS&ES	0.33	50	50	ENSMUST00000202928.2	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39343980	39354169	-	39344700	39354169	3pMXE	0.33	50	50	ENSMUST00000202785.2	ENSMUSG00000029924.13	Slc37a3	chr6	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 3
chr6	39387150	39396774	-	39387150	39396401	5pMXE	0.25	50	50	ENSMUST00000114823.8	ENSMUSG00000029922.16	Mkrn1	chr6	protein_coding	makorin, ring finger protein, 1
chr6	39387150	39397033	-	39387150	39396401	5pMXE	0.25	50	50	ENSMUST00000114823.8	ENSMUSG00000029922.16	Mkrn1	chr6	protein_coding	makorin, ring finger protein, 1
chr6	39376870	39377396	-	39376870	39377329	A5SS	0.5	50	50	ENSMUST00000114823.8	ENSMUSG00000029922.16	Mkrn1	chr6	protein_coding	makorin, ring finger protein, 1
chr6	39387150	39396573	-	39387150	39396401	A5SS	0.25	50	50	ENSMUST00000114823.8	ENSMUSG00000029922.16	Mkrn1	chr6	protein_coding	makorin, ring finger protein, 1
chr6	39387150	39396573	-	39387150	39397033	A5SS	0.25	50	50	ENSMUST00000031985.13	ENSMUSG00000029922.16	Mkrn1	chr6	protein_coding	makorin, ring finger protein, 1
chr6	39387150	39396774	-	39387150	39397033	A5SS	0.25	50	50	ENSMUST00000031985.13	ENSMUSG00000029922.16	Mkrn1	chr6	protein_coding	makorin, ring finger protein, 1
chr6	39387150	39396573	-	39387150	39396774	A5SS	0.25	50	50	ENSMUST00000122996.8	ENSMUSG00000029922.16	Mkrn1	chr6	protein_coding	makorin, ring finger protein, 1
chr6	39397586	39397674	+	39397131	39397674	A5SS	0.5	50	50	ENSMUST00000156905.2	ENSMUSG00000068601.3	Gm10244	chr6	lncRNA	predicted gene 10244
chr6	39500693;39504517	39504416;39534509	-	39500693	39534509	cassetteExon	0.5	100	100	ENSMUST00000036877.10	ENSMUSG00000038456.10	Dennd2a	chr6	protein_coding	DENN/MADD domain containing 2A
chr6	39504578	39506383	+	39504578	39520038	A3SS	0.5	50	50	ENSMUST00000135363.2	ENSMUSG00000085058.3	8030453O22Rik	chr6	lncRNA	RIKEN cDNA 8030453O22 gene
chr6	39552140	39556597	+	39552140;39553443	39553297;39556597	ES	0.5	50	50	ENSMUST00000140364.8	ENSMUSG00000046947.13	Adck2	chr6	protein_coding	aarF domain containing kinase 2
chr6	39558025	39558786	+	39558025	39560745	A3SS	0.5	50	50	ENSMUST00000140364.8	ENSMUSG00000046947.13	Adck2	chr6	protein_coding	aarF domain containing kinase 2
chr6	39550963	39553297	+	39552140	39553297	A5SS	0.5	50	50	ENSMUST00000140364.8	ENSMUSG00000046947.13	Adck2	chr6	protein_coding	aarF domain containing kinase 2
chr6	39552140	39556597	+	39553443	39556597	A5SS&ES	0.5	50	50	ENSMUST00000145788.8	ENSMUSG00000046947.13	Adck2	chr6	protein_coding	aarF domain containing kinase 2
chr6	39569646	39573385	+	39564782	39573385	A5SS	0.33	50	50	ENSMUST00000126621.3	ENSMUSG00000107071.2	Gm42420	chr6	protein_coding	predicted gene, 42420
chr6	39569737	39573385	+	39564782	39573385	A5SS	0.33	50	50	ENSMUST00000126621.3	ENSMUSG00000107071.2	Gm42420	chr6	protein_coding	predicted gene, 42420
chr6	39569737	39573385	+	39569646	39573385	A5SS	0.33	50	50	ENSMUST00000135671.8	ENSMUSG00000002416.14	Ndufb2	chr6	protein_coding	NADH:ubiquinone oxidoreductase subunit B2
chr6	39574280	39575200	+	39573529	39575200	A5SS	0.5	50	50	ENSMUST00000135671.8	ENSMUSG00000002416.14	Ndufb2	chr6	protein_coding	NADH:ubiquinone oxidoreductase subunit B2
chr6	39575299	39576326	+	39575295	39576326	A5SS	0.5	50	50	ENSMUST00000135671.8	ENSMUSG00000002416.14	Ndufb2	chr6	protein_coding	NADH:ubiquinone oxidoreductase subunit B2
chr6	39621314	39625384	-	39621314;39623778	39623659;39625384	ES	0.5	50	50	ENSMUST00000002487.15	ENSMUSG00000002413.16	Braf	chr6	protein_coding	Braf transforming gene
chr6	39625420	39628539	-	39625420;39625790	39625755;39628539	ES	0.5	50	50	ENSMUST00000002487.15	ENSMUSG00000002413.16	Braf	chr6	protein_coding	Braf transforming gene
chr6	39779478	39782421	-	39779478	39782305	A5SS	0.5	50	50	ENSMUST00000031978.9	ENSMUSG00000029918.10	Mrps33	chr6	protein_coding	mitochondrial ribosomal protein S33
chr6	40087308	40184330	+	39981192	40184330	A5SS	0.5	50	50	ENSMUST00000239008.2	ENSMUSG00000057716.8	Tmem178b	chr6	protein_coding	transmembrane protein 178B
chr6	40324385	40324516	+	40324385	40329287	A3SS	0.5	50	50	ENSMUST00000031977.12	ENSMUSG00000029916.12	Agk	chr6	protein_coding	acylglycerol kinase
chr6	40332027	40333979	+	40329366	40333979	A5SS	0.5	50	50	ENSMUST00000031977.12	ENSMUSG00000029916.12	Agk	chr6	protein_coding	acylglycerol kinase
chr6	40400757	40408291	-	40400757	40412792	A5SS	0.5	50	50	ENSMUST00000101492.10	ENSMUSG00000037172.15	Dennd11	chr6	protein_coding	DENN domain containing 11
chr6	40420118	40420868	+	40418890	40420868	A5SS	0.33	50	50	ENSMUST00000202464.4	ENSMUSG00000037159.12	Wee2	chr6	protein_coding	WEE1 homolog 2 (S. pombe)
chr6	40420453	40420868	+	40418890	40420868	A5SS	0.33	50	50	ENSMUST00000202464.4	ENSMUSG00000037159.12	Wee2	chr6	protein_coding	WEE1 homolog 2 (S. pombe)
chr6	40420118;40420453	40420310;40420868	+	40420118	40420868	cassetteExon	0.5	100	100	ENSMUST00000038907.9	ENSMUSG00000037159.12	Wee2	chr6	protein_coding	WEE1 homolog 2 (S. pombe)
chr6	40448759	40449005	+	40448393	40449005	A5SS	0.33	50	50	ENSMUST00000114779.9	ENSMUSG00000029911.15	Ssbp1	chr6	protein_coding	single-stranded DNA binding protein 1
chr6	40448769	40449005	+	40448393	40449005	A5SS	0.33	50	50	ENSMUST00000114779.9	ENSMUSG00000029911.15	Ssbp1	chr6	protein_coding	single-stranded DNA binding protein 1
chr6	40448769	40449005	+	40448759	40449005	A5SS	0.33	50	50	ENSMUST00000117411.8	ENSMUSG00000029911.15	Ssbp1	chr6	protein_coding	single-stranded DNA binding protein 1
chr6	40496194	40496335	-	40496120	40496335	A3SS	0.5	50	50	ENSMUST00000031967.6	ENSMUSG00000029909.7	Prss37	chr6	protein_coding	protease, serine 37
chr6	40521233	40531923	-	40523334	40531923	A3SS	0.33	50	50	ENSMUST00000215009.3	ENSMUSG00000068259.5	Olfr461	chr6	protein_coding	olfactory receptor 461
chr6	40521868	40531923	-	40523334	40531923	A3SS	0.33	50	50	ENSMUST00000215009.3	ENSMUSG00000068259.5	Olfr461	chr6	protein_coding	olfactory receptor 461
chr6	40521233	40531923	-	40521868	40531923	A3SS	0.33	50	50	ENSMUST00000216766.2	ENSMUSG00000068259.5	Olfr461	chr6	protein_coding	olfactory receptor 461
chr6	40559228;40561364	40561290;40562084	-	40559228	40562084	cassetteExon	0.5	100	100	ENSMUST00000101491.11	ENSMUSG00000029915.15	Clec5a	chr6	protein_coding	C-type lectin domain family 5, member a
chr6	40556410	40558734	-	40556413	40558734	A3SS	0.5	50	50	ENSMUST00000101491.11	ENSMUSG00000029915.15	Clec5a	chr6	protein_coding	C-type lectin domain family 5, member a
chr6	40556413;40559228	40558734;40562084	-	40556413	40562084	cassetteExon	0.5	100	100	ENSMUST00000031975.7	ENSMUSG00000029915.15	Clec5a	chr6	protein_coding	C-type lectin domain family 5, member a
chr6	40561364	40562084	-	40556413	40562084	A3SS	0.33	50	50	ENSMUST00000031975.7	ENSMUSG00000029915.15	Clec5a	chr6	protein_coding	C-type lectin domain family 5, member a
chr6	40556413	40562084	-	40559228	40562084	A3SS&ES	0.33	50	50	ENSMUST00000177178.2	ENSMUSG00000029915.15	Clec5a	chr6	protein_coding	C-type lectin domain family 5, member a
chr6	40605929;40620036	40619913;40621754	+	40605929	40621754	cassetteExon	0.5	100	100	ENSMUST00000202636.4	ENSMUSG00000068587.11	Mgam	chr6	protein_coding	maltase-glucoamylase
chr6	40663544;40691663	40691535;40727447	+	40663544;40727200	40727072;40727447	MXE	0.5	100	100	ENSMUST00000201148.4	ENSMUSG00000068587.11	Mgam	chr6	protein_coding	maltase-glucoamylase
chr6	40654007	40716997	+	40654007	40654410	A3SS&ES	0.5	50	50	ENSMUST00000201148.4	ENSMUSG00000068587.11	Mgam	chr6	protein_coding	maltase-glucoamylase
chr6	40663544	40664946	+	40663544	40727072	A3SS	0.33	50	50	ENSMUST00000201148.4	ENSMUSG00000068587.11	Mgam	chr6	protein_coding	maltase-glucoamylase
chr6	40726085	40727072	+	40663544	40727072	A5SS	0.33	50	50	ENSMUST00000201148.4	ENSMUSG00000068587.11	Mgam	chr6	protein_coding	maltase-glucoamylase
chr6	40726587	40727072	+	40663544	40727072	A5SS	0.33	50	50	ENSMUST00000201148.4	ENSMUSG00000068587.11	Mgam	chr6	protein_coding	maltase-glucoamylase
chr6	40663544	40664946	+	40663544	40691535	A3SS	0.33	50	50	ENSMUST00000071535.10	ENSMUSG00000068587.11	Mgam	chr6	protein_coding	maltase-glucoamylase
chr6	40691663	40691909	+	40691663	40727447	A3SS	0.5	50	50	ENSMUST00000071535.10	ENSMUSG00000068587.11	Mgam	chr6	protein_coding	maltase-glucoamylase
chr6	40690548	40691535	+	40663544	40691535	A5SS	0.5	50	50	ENSMUST00000071535.10	ENSMUSG00000068587.11	Mgam	chr6	protein_coding	maltase-glucoamylase
chr6	40605929	40621754	+	40620036	40621754	5pMXE	0.5	50	50	ENSMUST00000238599.2	ENSMUSG00000068587.11	Mgam	chr6	protein_coding	maltase-glucoamylase
chr6	40726587	40727072	+	40726085	40727072	A5SS	0.33	50	50	ENSMUST00000238599.2	ENSMUSG00000068587.11	Mgam	chr6	protein_coding	maltase-glucoamylase
chr6	40691663	40727447	+	40727200	40727447	A5SS&ES	0.5	50	50	ENSMUST00000202966.4	ENSMUSG00000068587.11	Mgam	chr6	protein_coding	maltase-glucoamylase
chr6	40716582	40716997	+	40654007	40716997	A5SS	0.5	50	50	ENSMUST00000202966.4	ENSMUSG00000068587.11	Mgam	chr6	protein_coding	maltase-glucoamylase
chr6	40906500;40916184	40916117;40917287	-	40906500	40917287	cassetteExon	0.5	100	100	ENSMUST00000122181.8	ENSMUSG00000029883.13	1700074P13Rik	chr6	protein_coding	RIKEN cDNA 1700074P13 gene
chr6	41036425	41036526	+	41035663	41036526	A5SS	0.5	50	50	ENSMUST00000193357.6	ENSMUSG00000103586.6	5830405F06Rik	chr6	lncRNA	RIKEN cDNA 5830405F06 gene
chr6	41039341	41039446	+	41036575	41039446	A5SS	0.5	50	50	ENSMUST00000193357.6	ENSMUSG00000103586.6	5830405F06Rik	chr6	lncRNA	RIKEN cDNA 5830405F06 gene
chr6	41093012	41093112	+	41093012	41093109	A3SS	0.5	50	50	ENSMUST00000194399.2	ENSMUSG00000076467.4	Trbv13-1	chr6	TR_V_gene	T cell receptor beta, variable 13-1
chr6	41193055	41193166	+	41193055	41193163	A3SS	0.5	50	50	ENSMUST00000193997.6	ENSMUSG00000076478.8	Trbv23	chr6	TR_V_gene	T cell receptor beta, variable V23
chr6	41204507	41204633	+	41204507	41204630	A3SS	0.5	50	50	ENSMUST00000193064.2	ENSMUSG00000076479.4	Trbv26	chr6	TR_V_gene	T cell receptor beta, variable 26
chr6	41258343	41258627	+	41258343	41258624	A3SS	0.5	50	50	ENSMUST00000191646.6	ENSMUSG00000076481.8	Trbv30	chr6	TR_V_gene	T cell receptor beta, variable 30
chr6	41290442	41293492	-	41290442	41291590	5pMXE	0.5	50	50	ENSMUST00000064324.12	ENSMUSG00000036938.18	Try5	chr6	protein_coding	trypsin 5
chr6	41534918	41535263	-	41534915	41535263	A3SS	0.5	50	50	ENSMUST00000103300.3	ENSMUSG00000076499.4	Trbv31	chr6	TR_V_gene	T cell receptor beta, variable 31
chr6	41591775	41592550	+	41591775	41592423	A3SS	0.5	50	50	ENSMUST00000114732.3	ENSMUSG00000029869.8	Ephb6	chr6	protein_coding	Eph receptor B6
chr6	41590745	41591013	+	41590750	41591013	A5SS	0.5	50	50	ENSMUST00000114732.3	ENSMUSG00000029869.8	Ephb6	chr6	protein_coding	Eph receptor B6
chr6	41597023	41597130	+	41597012	41597130	A5SS	0.5	50	50	ENSMUST00000114732.3	ENSMUSG00000029869.8	Ephb6	chr6	protein_coding	Eph receptor B6
chr6	41600793	41601516	-	41600793;41601294	41601129;41601516	ES	0.5	50	50	ENSMUST00000031902.7	ENSMUSG00000029868.15	Trpv6	chr6	protein_coding	transient receptor potential cation channel, subfamily V, member 6
chr6	41647923	41651436	-	41647923;41651303	41651157;41651436	ES	0.5	50	50	ENSMUST00000031901.11	ENSMUSG00000036899.11	Trpv5	chr6	protein_coding	transient receptor potential cation channel, subfamily V, member 5
chr6	41663542	41664879	-	41663542;41664551	41664456;41664879	ES	0.5	50	50	ENSMUST00000031899.14	ENSMUSG00000029866.14	Kel	chr6	protein_coding	Kell blood group
chr6	41664551	41664715	-	41664551	41664879	A5SS	0.5	50	50	ENSMUST00000031899.14	ENSMUSG00000029866.14	Kel	chr6	protein_coding	Kell blood group
chr6	41675382	41675822	-	41667794	41675822	A3SS	0.5	50	50	ENSMUST00000192118.2	ENSMUSG00000029866.14	Kel	chr6	protein_coding	Kell blood group
chr6	41667794	41674283	-	41667794	41675822	A5SS	0.5	50	50	ENSMUST00000192118.2	ENSMUSG00000029866.14	Kel	chr6	protein_coding	Kell blood group
chr6	41749318	41751957	-	41749318	41751549	5pMXE	0.5	50	50	ENSMUST00000214752.2	ENSMUSG00000045479.8	Olfr459	chr6	protein_coding	olfactory receptor 459
chr6	41837367	41838799	+	41829988	41838799	A5SS	0.5	50	50	ENSMUST00000120605.8	ENSMUSG00000014104.13	Sval2	chr6	protein_coding	seminal vesicle antigen-like 2
chr6	42223565	42224418	+	42223565;42223873	42223745;42224418	ES	0.5	50	50	ENSMUST00000031897.8	ENSMUSG00000029864.8	Gstk1	chr6	protein_coding	glutathione S-transferase kappa 1
chr6	42224761	42226313	+	42224703	42226313	A5SS	0.33	50	50	ENSMUST00000031897.8	ENSMUSG00000029864.8	Gstk1	chr6	protein_coding	glutathione S-transferase kappa 1
chr6	42224780	42226313	+	42224703	42226313	A5SS	0.33	50	50	ENSMUST00000031897.8	ENSMUSG00000029864.8	Gstk1	chr6	protein_coding	glutathione S-transferase kappa 1
chr6	42224761	42226313	+	42224780	42226313	A5SS	0.33	50	50	ENSMUST00000204088.3	ENSMUSG00000029864.8	Gstk1	chr6	protein_coding	glutathione S-transferase kappa 1
chr6	42246390	42253629	+	42246390;42250979	42250851;42253629	ES	0.5	50	50	ENSMUST00000031895.13	ENSMUSG00000029863.14	Casp2	chr6	protein_coding	caspase 2
chr6	42253719;42253864	42253804;42256711	+	42253719	42256711	cassetteExon	0.5	100	100	ENSMUST00000031895.13	ENSMUSG00000029863.14	Casp2	chr6	protein_coding	caspase 2
chr6	42245914	42246156	+	42245914	42246214	A3SS	0.5	50	50	ENSMUST00000031895.13	ENSMUSG00000029863.14	Casp2	chr6	protein_coding	caspase 2
chr6	42256860	42256947	+	42256860	42257018	A3SS	0.5	50	50	ENSMUST00000031895.13	ENSMUSG00000029863.14	Casp2	chr6	protein_coding	caspase 2
chr6	42257127	42257509	+	42257127	42257280	A3SS	0.5	50	50	ENSMUST00000031895.13	ENSMUSG00000029863.14	Casp2	chr6	protein_coding	caspase 2
chr6	42269952	42275733	+	42269952;42270456	42270378;42275733	ES	0.33	50	50	ENSMUST00000238845.2	ENSMUSG00000029862.17	Clcn1	chr6	protein_coding	chloride channel, voltage-sensitive 1
chr6	42269952;42271090	42271009;42275733	+	42269952;42270456	42270378;42275733	MXE	0.5	100	100	ENSMUST00000238845.2	ENSMUSG00000029862.17	Clcn1	chr6	protein_coding	chloride channel, voltage-sensitive 1
chr6	42269952;42271090	42271012;42275733	+	42269952;42270456	42270378;42275733	MXE	0.5	100	100	ENSMUST00000238845.2	ENSMUSG00000029862.17	Clcn1	chr6	protein_coding	chloride channel, voltage-sensitive 1
chr6	42270456;42271090	42271009;42275733	+	42270456	42275733	cassetteExon	0.5	100	100	ENSMUST00000238845.2	ENSMUSG00000029862.17	Clcn1	chr6	protein_coding	chloride channel, voltage-sensitive 1
chr6	42270456;42271090	42271012;42275733	+	42270456	42275733	cassetteExon	0.5	100	100	ENSMUST00000238845.2	ENSMUSG00000029862.17	Clcn1	chr6	protein_coding	chloride channel, voltage-sensitive 1
chr6	42269952	42275733	+	42269952;42271090	42271012;42275733	ES	0.33	50	50	ENSMUST00000031894.13	ENSMUSG00000029862.17	Clcn1	chr6	protein_coding	chloride channel, voltage-sensitive 1
chr6	42271090	42276172	+	42271090;42275858	42275733;42276172	ES	0.5	50	50	ENSMUST00000031894.13	ENSMUSG00000029862.17	Clcn1	chr6	protein_coding	chloride channel, voltage-sensitive 1
chr6	42276923	42282180	+	42276923;42277311	42277162;42282180	ES	0.5	50	50	ENSMUST00000031894.13	ENSMUSG00000029862.17	Clcn1	chr6	protein_coding	chloride channel, voltage-sensitive 1
chr6	42288184	42290172	+	42288184;42290092	42289988;42290172	ES	0.5	50	50	ENSMUST00000031894.13	ENSMUSG00000029862.17	Clcn1	chr6	protein_coding	chloride channel, voltage-sensitive 1
chr6	42269952;42270456	42270378;42271012	+	42269952	42271012	cassetteExon	0.5	100	100	ENSMUST00000031894.13	ENSMUSG00000029862.17	Clcn1	chr6	protein_coding	chloride channel, voltage-sensitive 1
chr6	42288184;42289067	42288949;42289988	+	42288184	42289988	cassetteExon	0.5	100	100	ENSMUST00000031894.13	ENSMUSG00000029862.17	Clcn1	chr6	protein_coding	chloride channel, voltage-sensitive 1
chr6	42269952	42271009	+	42269952	42271012	A3SS	0.25	50	50	ENSMUST00000031894.13	ENSMUSG00000029862.17	Clcn1	chr6	protein_coding	chloride channel, voltage-sensitive 1
chr6	42269952	42275733	+	42269952;42271090	42271009;42275733	ES	0.33	50	50	ENSMUST00000164091.8	ENSMUSG00000029862.17	Clcn1	chr6	protein_coding	chloride channel, voltage-sensitive 1
chr6	42269952;42270456	42270378;42271009	+	42269952	42271009	cassetteExon	0.5	100	100	ENSMUST00000164091.8	ENSMUSG00000029862.17	Clcn1	chr6	protein_coding	chloride channel, voltage-sensitive 1
chr6	42269952;42271090	42271009;42276172	+	42269952;42275858	42275733;42276172	MXE	0.5	100	100	ENSMUST00000170028.8	ENSMUSG00000029862.17	Clcn1	chr6	protein_coding	chloride channel, voltage-sensitive 1
chr6	42269952;42271090	42271012;42276172	+	42269952;42275858	42275733;42276172	MXE	0.5	100	100	ENSMUST00000170028.8	ENSMUSG00000029862.17	Clcn1	chr6	protein_coding	chloride channel, voltage-sensitive 1
chr6	42269952	42271012	+	42269952	42270378	A3SS&ES	0.25	50	50	ENSMUST00000169024.8	ENSMUSG00000029862.17	Clcn1	chr6	protein_coding	chloride channel, voltage-sensitive 1
chr6	42270456	42271012	+	42270456	42271009	A3SS	0.33	50	50	ENSMUST00000169024.8	ENSMUSG00000029862.17	Clcn1	chr6	protein_coding	chloride channel, voltage-sensitive 1
chr6	42269952	42271009	+	42269952	42270378	A3SS&ES	0.25	50	50	ENSMUST00000168660.4	ENSMUSG00000029862.17	Clcn1	chr6	protein_coding	chloride channel, voltage-sensitive 1
chr6	42271090	42276172	+	42275858	42276172	5pMXE	0.5	50	50	ENSMUST00000114684.8	ENSMUSG00000029862.17	Clcn1	chr6	protein_coding	chloride channel, voltage-sensitive 1
chr6	42288184	42288949	+	42288184	42290172	A3SS	0.33	50	50	ENSMUST00000114684.8	ENSMUSG00000029862.17	Clcn1	chr6	protein_coding	chloride channel, voltage-sensitive 1
chr6	42288184	42290172	+	42290092	42290172	5pMXE	0.5	50	50	ENSMUST00000169902.2	ENSMUSG00000029862.17	Clcn1	chr6	protein_coding	chloride channel, voltage-sensitive 1
chr6	42298277;42298560	42298525;42298841	-	42298277	42298841	cassetteExon	0.5	100	100	ENSMUST00000031891.15	ENSMUSG00000029861.18	Fam131b	chr6	protein_coding	family with sequence similarity 131, member B
chr6	42298950	42301436	-	42298950	42301376	A5SS	0.5	50	50	ENSMUST00000031891.15	ENSMUSG00000029861.18	Fam131b	chr6	protein_coding	family with sequence similarity 131, member B
chr6	42327410	42328409	+	42327410	42327880	3pMXE	0.5	50	50	ENSMUST00000203329.3	ENSMUSG00000029860.17	Zyx	chr6	protein_coding	zyxin
chr6	42326759	42327191	+	42326639	42327191	A5SS	0.33	50	50	ENSMUST00000203329.3	ENSMUSG00000029860.17	Zyx	chr6	protein_coding	zyxin
chr6	42327053	42327191	+	42326639	42327191	A5SS	0.33	50	50	ENSMUST00000203329.3	ENSMUSG00000029860.17	Zyx	chr6	protein_coding	zyxin
chr6	42328082	42328409	+	42328082;42328296	42328204;42328409	ES	0.33	50	50	ENSMUST00000203846.3	ENSMUSG00000029860.17	Zyx	chr6	protein_coding	zyxin
chr6	42327053	42327191	+	42326759	42327191	A5SS	0.33	50	50	ENSMUST00000203846.3	ENSMUSG00000029860.17	Zyx	chr6	protein_coding	zyxin
chr6	42330634	42332851	+	42328903	42332851	A5SS	0.33	50	50	ENSMUST00000203652.3	ENSMUSG00000029860.17	Zyx	chr6	protein_coding	zyxin
chr6	42332200	42332851	+	42328903	42332851	A5SS	0.33	50	50	ENSMUST00000203652.3	ENSMUSG00000029860.17	Zyx	chr6	protein_coding	zyxin
chr6	42327410	42328409	+	42327410;42328082	42327880;42328409	ES	0.33	50	50	ENSMUST00000070635.13	ENSMUSG00000029860.17	Zyx	chr6	protein_coding	zyxin
chr6	42334919	42335777	+	42334919	42335103	3pMXE	0.5	50	50	ENSMUST00000203401.3	ENSMUSG00000029860.17	Zyx	chr6	protein_coding	zyxin
chr6	42327410;42328296	42327880;42328409	+	42327410	42328409	cassetteExon	0.5	100	100	ENSMUST00000203626.2	ENSMUSG00000029860.17	Zyx	chr6	protein_coding	zyxin
chr6	42332200	42332851	+	42330634	42332851	A5SS	0.33	50	50	ENSMUST00000204270.3	ENSMUSG00000029860.17	Zyx	chr6	protein_coding	zyxin
chr6	42338088	42338528	-	42338088;42338426	42338220;42338528	ES	0.5	50	50	ENSMUST00000073387.5	ENSMUSG00000029859.7	Epha1	chr6	protein_coding	Eph receptor A1
chr6	42355941	42356080	+	42355941	42356922	A3SS	0.5	50	50	ENSMUST00000190889.7	ENSMUSG00000101268.7	2010310C07Rik	chr6	lncRNA	RIKEN cDNA 2010310C07 gene
chr6	42354943	42355840	+	42348332	42355840	A5SS	0.5	50	50	ENSMUST00000190889.7	ENSMUSG00000101268.7	2010310C07Rik	chr6	lncRNA	RIKEN cDNA 2010310C07 gene
chr6	42449245	42453163	-	42449126	42453163	A3SS	0.5	50	50	ENSMUST00000204324.3	ENSMUSG00000091983.4	Olfr457	chr6	protein_coding	olfactory receptor 457
chr6	42663892;42686571	42686463;42686893	-	42663892	42686893	cassetteExon	0.5	100	100	ENSMUST00000045054.11	ENSMUSG00000036667.15	Tcaf1	chr6	protein_coding	TRPM8 channel-associated factor 1
chr6	42656354	42663759	-	42656354	42663259	A5SS	0.5	50	50	ENSMUST00000045054.11	ENSMUSG00000036667.15	Tcaf1	chr6	protein_coding	TRPM8 channel-associated factor 1
chr6	42663892	42669867	-	42663892	42686893	A5SS	0.33	50	50	ENSMUST00000045054.11	ENSMUSG00000036667.15	Tcaf1	chr6	protein_coding	TRPM8 channel-associated factor 1
chr6	42663892	42686463	-	42663892	42669867	5pMXE	0.33	50	50	ENSMUST00000121083.8	ENSMUSG00000036667.15	Tcaf1	chr6	protein_coding	TRPM8 channel-associated factor 1
chr6	42668126	42669867	-	42663892	42669867	A3SS	0.5	50	50	ENSMUST00000121083.8	ENSMUSG00000036667.15	Tcaf1	chr6	protein_coding	TRPM8 channel-associated factor 1
chr6	42686260	42686463	-	42663892	42686463	A3SS	0.5	50	50	ENSMUST00000151021.8	ENSMUSG00000036667.15	Tcaf1	chr6	protein_coding	TRPM8 channel-associated factor 1
chr6	42763163	42766952	+	42763163;42766101	42766028;42766952	ES	0.5	50	50	ENSMUST00000217701.2	ENSMUSG00000094192.6	Olfr452	chr6	protein_coding	olfactory receptor 452
chr6	42762328	42766028	+	42763163	42766028	A5SS	0.5	50	50	ENSMUST00000217701.2	ENSMUSG00000094192.6	Olfr452	chr6	protein_coding	olfactory receptor 452
chr6	42763163	42766952	+	42766101	42766952	A5SS&ES	0.5	50	50	ENSMUST00000214465.2	ENSMUSG00000094192.6	Olfr452	chr6	protein_coding	olfactory receptor 452
chr6	42811524	42811622	+	42811438	42811622	A5SS	0.5	50	50	ENSMUST00000204229.3	ENSMUSG00000049168.10	Olfr449	chr6	protein_coding	olfactory receptor 449
chr6	42868000	42873335	+	42867453	42873335	A5SS	0.5	50	50	ENSMUST00000214529.2	ENSMUSG00000043119.6	Olfr448	chr6	protein_coding	olfactory receptor 448
chr6	42898464	42899197	+	42898639	42899197	A5SS	0.5	50	50	ENSMUST00000215369.2	ENSMUSG00000073111.4	Olfr446	chr6	protein_coding	olfactory receptor 446
chr6	42898464	42899200	+	42898464	42899197	A3SS	0.5	50	50	ENSMUST00000216199.2	ENSMUSG00000073111.4	Olfr446	chr6	protein_coding	olfactory receptor 446
chr6	43123712	43130201	+	43123712;43125157	43125053;43130201	ES	0.5	50	50	ENSMUST00000215911.2	ENSMUSG00000094200.3	Olfr237	chr6	protein_coding	olfactory receptor 237
chr6	43190069	43193845	+	43190069	43194007	A3SS	0.5	50	50	ENSMUST00000215485.2	ENSMUSG00000059411.7	Olfr434	chr6	protein_coding	olfactory receptor 434
chr6	43260265	43262293	+	43260265;43260988	43260827;43262293	ES	0.5	50	50	ENSMUST00000031750.14	ENSMUSG00000033542.14	Arhgef5	chr6	protein_coding	Rho guanine nucleotide exchange factor (GEF) 5
chr6	43260265	43262293	+	43260265	43260827	A3SS	0.5	50	50	ENSMUST00000182190.8	ENSMUSG00000033542.14	Arhgef5	chr6	protein_coding	Rho guanine nucleotide exchange factor (GEF) 5
chr6	43260265	43262293	+	43260988	43262293	A5SS	0.5	50	50	ENSMUST00000183313.2	ENSMUSG00000033542.14	Arhgef5	chr6	protein_coding	Rho guanine nucleotide exchange factor (GEF) 5
chr6	43281875	43282438	-	43282103	43282438	A3SS	0.5	50	50	ENSMUST00000031749.16	ENSMUSG00000029736.16	Nobox	chr6	protein_coding	NOBOX oogenesis homeobox
chr6	43281199	43281636	-	43281199	43281799	A5SS	0.5	50	50	ENSMUST00000031749.16	ENSMUSG00000029736.16	Nobox	chr6	protein_coding	NOBOX oogenesis homeobox
chr6	43400666	43465809	-	43400666;43446082	43445936;43465809	ES	0.5	50	50	ENSMUST00000067888.14	ENSMUSG00000029735.18	Tpk1	chr6	protein_coding	thiamine pyrophosphokinase
chr6	43570077	43588248	-	43536946	43588248	A3SS	0.5	50	50	ENSMUST00000067888.14	ENSMUSG00000029735.18	Tpk1	chr6	protein_coding	thiamine pyrophosphokinase
chr6	43446082	43453414	-	43446082	43465809	A5SS	0.5	50	50	ENSMUST00000067888.14	ENSMUSG00000029735.18	Tpk1	chr6	protein_coding	thiamine pyrophosphokinase
chr6	43536946	43602627	-	43536946	43588248	A5SS&ES	0.5	50	50	ENSMUST00000067888.14	ENSMUSG00000029735.18	Tpk1	chr6	protein_coding	thiamine pyrophosphokinase
chr6	46398397	46412393	+	46398397	46460863	A3SS	0.5	50	50	ENSMUST00000114641.8	ENSMUSG00000039419.18	Cntnap2	chr6	protein_coding	contactin associated protein-like 2
chr6	47022045	47026126	+	46998722	47026126	A5SS	0.5	50	50	ENSMUST00000114641.8	ENSMUSG00000039419.18	Cntnap2	chr6	protein_coding	contactin associated protein-like 2
chr6	47221449	47248074	+	47170013	47248074	A5SS	0.33	50	50	ENSMUST00000114641.8	ENSMUSG00000039419.18	Cntnap2	chr6	protein_coding	contactin associated protein-like 2
chr6	47221483	47248074	+	47170013	47248074	A5SS	0.33	50	50	ENSMUST00000114641.8	ENSMUSG00000039419.18	Cntnap2	chr6	protein_coding	contactin associated protein-like 2
chr6	47221449	47248074	+	47221483	47248074	A5SS	0.33	50	50	ENSMUST00000199100.5	ENSMUSG00000039419.18	Cntnap2	chr6	protein_coding	contactin associated protein-like 2
chr6	47430963	47461678	+	47430561	47461678	A5SS	0.33	50	50	ENSMUST00000146828.8	ENSMUSG00000029686.16	Cul1	chr6	protein_coding	cullin 1
chr6	47431417	47461678	+	47430561	47461678	A5SS	0.33	50	50	ENSMUST00000146828.8	ENSMUSG00000029686.16	Cul1	chr6	protein_coding	cullin 1
chr6	47431417	47461678	+	47430963	47461678	A5SS	0.33	50	50	ENSMUST00000152547.6	ENSMUSG00000029686.16	Cul1	chr6	protein_coding	cullin 1
chr6	47508759;47508999	47508919;47509836	-	47508759	47509836	cassetteExon	0.5	100	100	ENSMUST00000204243.3	ENSMUSG00000029687.17	Ezh2	chr6	protein_coding	enhancer of zeste 2 polycomb repressive complex 2 subunit
chr6	47517789	47519300	-	47517789;47518904	47518779;47519300	ES	0.5	50	50	ENSMUST00000081721.13	ENSMUSG00000029687.17	Ezh2	chr6	protein_coding	enhancer of zeste 2 polycomb repressive complex 2 subunit
chr6	47520974	47522610	-	47520974;47521543	47521374;47522610	ES	0.5	50	50	ENSMUST00000081721.13	ENSMUSG00000029687.17	Ezh2	chr6	protein_coding	enhancer of zeste 2 polycomb repressive complex 2 subunit
chr6	47533084	47553470	-	47533084;47535228	47535112;47553470	ES	0.33	50	50	ENSMUST00000081721.13	ENSMUSG00000029687.17	Ezh2	chr6	protein_coding	enhancer of zeste 2 polycomb repressive complex 2 subunit
chr6	47554601	47572118	-	47554601	47571828	5pMXE	0.5	50	50	ENSMUST00000081721.13	ENSMUSG00000029687.17	Ezh2	chr6	protein_coding	enhancer of zeste 2 polycomb repressive complex 2 subunit
chr6	47522850;47523764	47523683;47524279	-	47522850	47524279	cassetteExon	0.5	100	100	ENSMUST00000081721.13	ENSMUSG00000029687.17	Ezh2	chr6	protein_coding	enhancer of zeste 2 polycomb repressive complex 2 subunit
chr6	47533084;47538872	47538603;47553470	-	47533084;47535228	47535112;47553470	MXE	0.5	100	100	ENSMUST00000081721.13	ENSMUSG00000029687.17	Ezh2	chr6	protein_coding	enhancer of zeste 2 polycomb repressive complex 2 subunit
chr6	47524370	47528651	-	47524370	47528666	A5SS	0.5	50	50	ENSMUST00000081721.13	ENSMUSG00000029687.17	Ezh2	chr6	protein_coding	enhancer of zeste 2 polycomb repressive complex 2 subunit
chr6	47535228	47553497	-	47535228	47553470	A5SS	0.5	50	50	ENSMUST00000081721.13	ENSMUSG00000029687.17	Ezh2	chr6	protein_coding	enhancer of zeste 2 polycomb repressive complex 2 subunit
chr6	47533084	47538603	-	47533084	47535112	A5SS&ES	0.33	50	50	ENSMUST00000114618.8	ENSMUSG00000029687.17	Ezh2	chr6	protein_coding	enhancer of zeste 2 polycomb repressive complex 2 subunit
chr6	47533084	47553470	-	47533084	47535112	A5SS&ES	0.33	50	50	ENSMUST00000114618.8	ENSMUSG00000029687.17	Ezh2	chr6	protein_coding	enhancer of zeste 2 polycomb repressive complex 2 subunit
chr6	47533084;47538872	47538603;47553470	-	47533084	47553470	cassetteExon	0.5	100	100	ENSMUST00000114616.8	ENSMUSG00000029687.17	Ezh2	chr6	protein_coding	enhancer of zeste 2 polycomb repressive complex 2 subunit
chr6	47508759	47509836	-	47508759	47508919	5pMXE	0.5	50	50	ENSMUST00000203857.2	ENSMUSG00000029687.17	Ezh2	chr6	protein_coding	enhancer of zeste 2 polycomb repressive complex 2 subunit
chr6	47508759	47509836	-	47508999	47509836	3pMXE	0.5	50	50	ENSMUST00000171614.2	ENSMUSG00000029687.17	Ezh2	chr6	protein_coding	enhancer of zeste 2 polycomb repressive complex 2 subunit
chr6	47784145	47790151	-	47784145;47785277	47785109;47790151	ES	0.5	50	50	ENSMUST00000077290.9	ENSMUSG00000025823.10	Pdia4	chr6	protein_coding	protein disulfide isomerase associated 4
chr6	47804022	47807425	-	47804022	47807330	A5SS	0.5	50	50	ENSMUST00000058844.6	ENSMUSG00000051499.8	Zfp786	chr6	protein_coding	zinc finger protein 786
chr6	47812854	47835863	+	47812854	47817186	3pMXE	0.5	50	50	ENSMUST00000146202.2	ENSMUSG00000062519.14	Zfp398	chr6	protein_coding	zinc finger protein 398
chr6	47812854	47835863	+	47812854;47817581	47817186;47835863	ES	0.5	50	50	ENSMUST00000079881.11	ENSMUSG00000062519.14	Zfp398	chr6	protein_coding	zinc finger protein 398
chr6	47922685	47925828	+	47922685;47922896	47922817;47925828	ES	0.33	50	50	ENSMUST00000130490.10	ENSMUSG00000072653.15	Zfp783	chr6	transcribed_unprocessed_pseudogene	zinc finger protein 783
chr6	47926925	47932751	+	47926925	47927912	3pMXE	0.25	50	50	ENSMUST00000130490.10	ENSMUSG00000072653.15	Zfp783	chr6	transcribed_unprocessed_pseudogene	zinc finger protein 783
chr6	47922685;47923724	47923596;47925828	+	47922685;47922896	47922817;47925828	MXE	0.5	100	100	ENSMUST00000130490.10	ENSMUSG00000072653.15	Zfp783	chr6	transcribed_unprocessed_pseudogene	zinc finger protein 783
chr6	47922896;47923724	47923596;47925828	+	47922896	47925828	cassetteExon	0.5	100	100	ENSMUST00000130490.10	ENSMUSG00000072653.15	Zfp783	chr6	transcribed_unprocessed_pseudogene	zinc finger protein 783
chr6	47920311	47922400	+	47920311	47922363	A3SS	0.5	50	50	ENSMUST00000130490.10	ENSMUSG00000072653.15	Zfp783	chr6	transcribed_unprocessed_pseudogene	zinc finger protein 783
chr6	47922685	47922771	+	47922685	47922817	A3SS	0.25	50	50	ENSMUST00000130490.10	ENSMUSG00000072653.15	Zfp783	chr6	transcribed_unprocessed_pseudogene	zinc finger protein 783
chr6	47925953	47928302	+	47925953	47926815	A3SS&ES	0.5	50	50	ENSMUST00000130490.10	ENSMUSG00000072653.15	Zfp783	chr6	transcribed_unprocessed_pseudogene	zinc finger protein 783
chr6	47926925	47928312	+	47926925	47927912	A3SS	0.25	50	50	ENSMUST00000130490.10	ENSMUSG00000072653.15	Zfp783	chr6	transcribed_unprocessed_pseudogene	zinc finger protein 783
chr6	47926925	47930285	+	47926925	47927912	A3SS	0.25	50	50	ENSMUST00000130490.10	ENSMUSG00000072653.15	Zfp783	chr6	transcribed_unprocessed_pseudogene	zinc finger protein 783
chr6	47922685	47925828	+	47922685	47922817	3pMXE	0.25	50	50	ENSMUST00000114588.2	ENSMUSG00000072653.15	Zfp783	chr6	transcribed_unprocessed_pseudogene	zinc finger protein 783
chr6	47922685	47923596	+	47922685	47922817	A3SS	0.25	50	50	ENSMUST00000114588.2	ENSMUSG00000072653.15	Zfp783	chr6	transcribed_unprocessed_pseudogene	zinc finger protein 783
chr6	47922685	47923596	+	47922685;47922896	47922817;47923596	ES	0.5	50	50	ENSMUST00000175808.8	ENSMUSG00000072653.15	Zfp783	chr6	transcribed_unprocessed_pseudogene	zinc finger protein 783
chr6	47922896	47925828	+	47922896	47923596	3pMXE	0.5	50	50	ENSMUST00000175808.8	ENSMUSG00000072653.15	Zfp783	chr6	transcribed_unprocessed_pseudogene	zinc finger protein 783
chr6	47926925	47930285	+	47926925	47928312	3pMXE	0.25	50	50	ENSMUST00000154259.11	ENSMUSG00000072653.15	Zfp783	chr6	transcribed_unprocessed_pseudogene	zinc finger protein 783
chr6	47926925	47932751	+	47926925	47928312	3pMXE	0.25	50	50	ENSMUST00000154259.11	ENSMUSG00000072653.15	Zfp783	chr6	transcribed_unprocessed_pseudogene	zinc finger protein 783
chr6	47926925	47932751	+	47926925	47930285	3pMXE	0.25	50	50	ENSMUST00000173129.9	ENSMUSG00000072653.15	Zfp783	chr6	transcribed_unprocessed_pseudogene	zinc finger protein 783
chr6	47922685;47922896	47922771;47925828	+	47922685	47925828	cassetteExon	0.5	100	100	ENSMUST00000173129.9	ENSMUSG00000072653.15	Zfp783	chr6	transcribed_unprocessed_pseudogene	zinc finger protein 783
chr6	47922685;47923724	47923596;47925828	+	47922685	47925828	cassetteExon	0.5	100	100	ENSMUST00000173129.9	ENSMUSG00000072653.15	Zfp783	chr6	transcribed_unprocessed_pseudogene	zinc finger protein 783
chr6	47922685;47922896	47922771;47923596	+	47922685	47923596	cassetteExon	0.5	100	100	ENSMUST00000212438.2	ENSMUSG00000072653.15	Zfp783	chr6	transcribed_unprocessed_pseudogene	zinc finger protein 783
chr6	47922685;47922896	47922771;47925828	+	47922685;47923724	47923596;47925828	MXE	0.5	100	100	ENSMUST00000212438.2	ENSMUSG00000072653.15	Zfp783	chr6	transcribed_unprocessed_pseudogene	zinc finger protein 783
chr6	47922685	47923596	+	47922896	47923596	5pMXE	0.5	50	50	ENSMUST00000130463.10	ENSMUSG00000072653.15	Zfp783	chr6	transcribed_unprocessed_pseudogene	zinc finger protein 783
chr6	47926925;47930516	47930285;47932751	+	47926925	47932751	cassetteExon	0.5	100	100	ENSMUST00000130463.10	ENSMUSG00000072653.15	Zfp783	chr6	transcribed_unprocessed_pseudogene	zinc finger protein 783
chr6	47922685	47925828	+	47922896	47925828	5pMXE	0.33	50	50	ENSMUST00000135828.8	ENSMUSG00000072653.15	Zfp783	chr6	transcribed_unprocessed_pseudogene	zinc finger protein 783
chr6	47922685	47925828	+	47923724	47925828	5pMXE	0.33	50	50	ENSMUST00000132381.2	ENSMUSG00000072653.15	Zfp783	chr6	transcribed_unprocessed_pseudogene	zinc finger protein 783
chr6	47922896	47925828	+	47923724	47925828	5pMXE	0.33	50	50	ENSMUST00000132381.2	ENSMUSG00000072653.15	Zfp783	chr6	transcribed_unprocessed_pseudogene	zinc finger protein 783
chr6	47926925	47932751	+	47930516	47932751	5pMXE	0.5	50	50	ENSMUST00000101445.11	ENSMUSG00000045466.19	Zfp956	chr6	protein_coding	zinc finger protein 956
chr6	47934658	47939459	+	47934536	47939459	A5SS	0.5	50	50	ENSMUST00000101445.11	ENSMUSG00000045466.19	Zfp956	chr6	protein_coding	zinc finger protein 956
chr6	48021635	48025627	-	48021635	48024920	5pMXE	0.33	50	50	ENSMUST00000114583.8	ENSMUSG00000071477.11	Zfp777	chr6	protein_coding	zinc finger protein 777
chr6	48006407	48014489	-	48006308	48014489	A3SS	0.5	50	50	ENSMUST00000114583.8	ENSMUSG00000071477.11	Zfp777	chr6	protein_coding	zinc finger protein 777
chr6	48021635	48024566	-	48021635	48024920	A5SS	0.33	50	50	ENSMUST00000114583.8	ENSMUSG00000071477.11	Zfp777	chr6	protein_coding	zinc finger protein 777
chr6	48021635	48024566	-	48021635	48025627	A5SS	0.33	50	50	ENSMUST00000095944.10	ENSMUSG00000071477.11	Zfp777	chr6	protein_coding	zinc finger protein 777
chr6	48041883	48043363	-	48041886	48043363	A3SS	0.5	50	50	ENSMUST00000073124.9	ENSMUSG00000057691.9	Zfp746	chr6	protein_coding	zinc finger protein 746
chr6	48041883	48044103	-	48043488	48044103	A3SS&ES	0.5	50	50	ENSMUST00000073124.9	ENSMUSG00000057691.9	Zfp746	chr6	protein_coding	zinc finger protein 746
chr6	48041883	48044103	-	48041883;48043488	48043363;48044103	ES	0.5	50	50	ENSMUST00000203609.3	ENSMUSG00000057691.9	Zfp746	chr6	protein_coding	zinc finger protein 746
chr6	48372821	48380312	+	48372821;48379944	48379805;48380312	ES	0.5	50	50	ENSMUST00000114571.8	ENSMUSG00000042810.15	Krba1	chr6	protein_coding	KRAB-A domain containing 1
chr6	48382323	48383768	+	48382323;48383365	48383231;48383768	ES	0.5	50	50	ENSMUST00000114571.8	ENSMUSG00000042810.15	Krba1	chr6	protein_coding	KRAB-A domain containing 1
chr6	48384756	48386104	+	48384756;48385660	48385463;48386104	ES	0.5	50	50	ENSMUST00000114571.8	ENSMUSG00000042810.15	Krba1	chr6	protein_coding	KRAB-A domain containing 1
chr6	48372821	48378048	+	48372821	48379805	A3SS	0.25	50	50	ENSMUST00000114571.8	ENSMUSG00000042810.15	Krba1	chr6	protein_coding	KRAB-A domain containing 1
chr6	48372821	48379818	+	48372821	48379805	A3SS	0.25	50	50	ENSMUST00000114571.8	ENSMUSG00000042810.15	Krba1	chr6	protein_coding	KRAB-A domain containing 1
chr6	48379944	48380357	+	48379944	48380312	A3SS	0.5	50	50	ENSMUST00000114571.8	ENSMUSG00000042810.15	Krba1	chr6	protein_coding	KRAB-A domain containing 1
chr6	48381074	48382171	+	48381074	48382168	A3SS	0.5	50	50	ENSMUST00000114571.8	ENSMUSG00000042810.15	Krba1	chr6	protein_coding	KRAB-A domain containing 1
chr6	48382323	48383234	+	48382323	48383231	A3SS	0.33	50	50	ENSMUST00000114571.8	ENSMUSG00000042810.15	Krba1	chr6	protein_coding	KRAB-A domain containing 1
chr6	48382323	48383768	+	48382323;48383365	48383234;48383768	ES	0.5	50	50	ENSMUST00000031815.12	ENSMUSG00000042810.15	Krba1	chr6	protein_coding	KRAB-A domain containing 1
chr6	48372821;48379944	48379818;48380312	+	48372821	48380312	cassetteExon	0.5	100	100	ENSMUST00000031815.12	ENSMUSG00000042810.15	Krba1	chr6	protein_coding	KRAB-A domain containing 1
chr6	48372821	48378048	+	48372821	48380312	A3SS	0.25	50	50	ENSMUST00000031815.12	ENSMUSG00000042810.15	Krba1	chr6	protein_coding	KRAB-A domain containing 1
chr6	48372821	48380312	+	48372821;48379944	48378048;48380312	ES	0.5	50	50	ENSMUST00000077093.7	ENSMUSG00000042810.15	Krba1	chr6	protein_coding	KRAB-A domain containing 1
chr6	48372821	48379818	+	48372821	48378048	A3SS	0.25	50	50	ENSMUST00000077093.7	ENSMUSG00000042810.15	Krba1	chr6	protein_coding	KRAB-A domain containing 1
chr6	48372821	48380312	+	48372821	48379805	A3SS&ES	0.25	50	50	ENSMUST00000127980.2	ENSMUSG00000042810.15	Krba1	chr6	protein_coding	KRAB-A domain containing 1
chr6	48384756	48386104	+	48384756	48385463	3pMXE	0.5	50	50	ENSMUST00000148697.6	ENSMUSG00000042810.15	Krba1	chr6	protein_coding	KRAB-A domain containing 1
chr6	48420421	48421905	-	48420421	48420915	5pMXE	0.33	50	50	ENSMUST00000114566.8	ENSMUSG00000068551.13	Zfp467	chr6	protein_coding	zinc finger protein 467
chr6	48420421	48422287	-	48420421	48420915	5pMXE	0.33	50	50	ENSMUST00000114566.8	ENSMUSG00000068551.13	Zfp467	chr6	protein_coding	zinc finger protein 467
chr6	48419672;48419836	48419770;48420346	-	48419672	48420346	cassetteExon	0.5	100	100	ENSMUST00000114566.8	ENSMUSG00000068551.13	Zfp467	chr6	protein_coding	zinc finger protein 467
chr6	48416291	48418881	-	48404813	48418881	A3SS	0.25	50	50	ENSMUST00000114566.8	ENSMUSG00000068551.13	Zfp467	chr6	protein_coding	zinc finger protein 467
chr6	48416388	48418881	-	48404813	48418881	A3SS	0.25	50	50	ENSMUST00000114566.8	ENSMUSG00000068551.13	Zfp467	chr6	protein_coding	zinc finger protein 467
chr6	48418765	48418881	-	48404813	48418881	A3SS	0.25	50	50	ENSMUST00000114566.8	ENSMUSG00000068551.13	Zfp467	chr6	protein_coding	zinc finger protein 467
chr6	48419672	48422287	-	48419672;48420421	48420346;48422287	ES	0.5	50	50	ENSMUST00000101443.10	ENSMUSG00000068551.13	Zfp467	chr6	protein_coding	zinc finger protein 467
chr6	48420421	48421905	-	48420421	48422287	A5SS	0.33	50	50	ENSMUST00000101443.10	ENSMUSG00000068551.13	Zfp467	chr6	protein_coding	zinc finger protein 467
chr6	48419672	48419770	-	48419672	48422287	A5SS	0.33	50	50	ENSMUST00000114564.8	ENSMUSG00000068551.13	Zfp467	chr6	protein_coding	zinc finger protein 467
chr6	48416291	48418881	-	48418765	48418881	A3SS&ES	0.33	50	50	ENSMUST00000114563.8	ENSMUSG00000068551.13	Zfp467	chr6	protein_coding	zinc finger protein 467
chr6	48416388	48418881	-	48418765	48418881	A3SS&ES	0.33	50	50	ENSMUST00000114563.8	ENSMUSG00000068551.13	Zfp467	chr6	protein_coding	zinc finger protein 467
chr6	48416388	48418881	-	48416291	48418881	A3SS	0.25	50	50	ENSMUST00000114559.8	ENSMUSG00000068551.13	Zfp467	chr6	protein_coding	zinc finger protein 467
chr6	48419672	48420346	-	48419836	48420346	3pMXE	0.5	50	50	ENSMUST00000140198.2	ENSMUSG00000068551.13	Zfp467	chr6	protein_coding	zinc finger protein 467
chr6	48458250	48460229	+	48458250;48459757	48459588;48460229	ES	0.5	50	50	ENSMUST00000212740.2	ENSMUSG00000029797.14	Sspo	chr6	protein_coding	SCO-spondin
chr6	48470837	48471758	+	48470837;48471122	48471006;48471758	ES	0.5	50	50	ENSMUST00000212740.2	ENSMUSG00000029797.14	Sspo	chr6	protein_coding	SCO-spondin
chr6	48473456	48474309	+	48473456;48473599	48473553;48474309	ES	0.5	50	50	ENSMUST00000212740.2	ENSMUSG00000029797.14	Sspo	chr6	protein_coding	SCO-spondin
chr6	48444924	48445409	+	48444924	48445391	A3SS	0.5	50	50	ENSMUST00000212740.2	ENSMUSG00000029797.14	Sspo	chr6	protein_coding	SCO-spondin
chr6	48461959	48462254	+	48461959	48462248	A3SS	0.5	50	50	ENSMUST00000212740.2	ENSMUSG00000029797.14	Sspo	chr6	protein_coding	SCO-spondin
chr6	48436094	48436237	+	48436100	48436237	A5SS	0.5	50	50	ENSMUST00000212740.2	ENSMUSG00000029797.14	Sspo	chr6	protein_coding	SCO-spondin
chr6	48441547	48441723	+	48441595	48441723	A5SS	0.5	50	50	ENSMUST00000212740.2	ENSMUSG00000029797.14	Sspo	chr6	protein_coding	SCO-spondin
chr6	48444682	48444771	+	48444697	48444771	A5SS	0.5	50	50	ENSMUST00000212740.2	ENSMUSG00000029797.14	Sspo	chr6	protein_coding	SCO-spondin
chr6	48475327	48475578	+	48475336	48475578	A5SS	0.5	50	50	ENSMUST00000212740.2	ENSMUSG00000029797.14	Sspo	chr6	protein_coding	SCO-spondin
chr6	48492290	48501958	+	48492290	48500890	3pMXE	0.5	50	50	ENSMUST00000203848.3	ENSMUSG00000107476.4	Zfp862-ps	chr6	transcribed_unitary_pseudogene	zinc finger protein 862, pseudogene
chr6	48485317;48487114	48487010;48488749	+	48485317	48488749	cassetteExon	0.5	100	100	ENSMUST00000203848.3	ENSMUSG00000107476.4	Zfp862-ps	chr6	transcribed_unitary_pseudogene	zinc finger protein 862, pseudogene
chr6	48504483	48508969	+	48504483;48507374	48505285;48508969	ES	0.5	50	50	ENSMUST00000203457.3	ENSMUSG00000107476.4	Zfp862-ps	chr6	transcribed_unitary_pseudogene	zinc finger protein 862, pseudogene
chr6	48489446;48502056	48501958;48504379	+	48489446;48491260	48491086;48504379	MXE	0.5	100	100	ENSMUST00000203457.3	ENSMUSG00000107476.4	Zfp862-ps	chr6	transcribed_unitary_pseudogene	zinc finger protein 862, pseudogene
chr6	48491260	48492171	+	48491260	48504379	A3SS	0.5	50	50	ENSMUST00000203457.3	ENSMUSG00000107476.4	Zfp862-ps	chr6	transcribed_unitary_pseudogene	zinc finger protein 862, pseudogene
chr6	48492290	48501958	+	48489446	48501958	A5SS	0.5	50	50	ENSMUST00000204484.3	ENSMUSG00000107476.4	Zfp862-ps	chr6	transcribed_unitary_pseudogene	zinc finger protein 862, pseudogene
chr6	48504483	48505285	+	48504483	48508969	A3SS	0.5	50	50	ENSMUST00000203789.3	ENSMUSG00000107476.4	Zfp862-ps	chr6	transcribed_unitary_pseudogene	zinc finger protein 862, pseudogene
chr6	48507374	48508969	+	48504483	48508969	A5SS	0.5	50	50	ENSMUST00000203789.3	ENSMUSG00000107476.4	Zfp862-ps	chr6	transcribed_unitary_pseudogene	zinc finger protein 862, pseudogene
chr6	48516205	48517362	+	48516205;48517100	48516974;48517362	ES	0.5	50	50	ENSMUST00000040361.8	ENSMUSG00000039347.8	Atp6v0e2	chr6	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit E2
chr6	48531916	48545071	+	48531916;48534028	48533889;48545071	ES	0.25	50	50	ENSMUST00000114545.8	ENSMUSG00000073096.12	Lrrc61	chr6	protein_coding	leucine rich repeat containing 61
chr6	48531827	48533889	+	48531916	48533889	A5SS	0.33	50	50	ENSMUST00000114545.8	ENSMUSG00000073096.12	Lrrc61	chr6	protein_coding	leucine rich repeat containing 61
chr6	48531827	48545071	+	48534028	48545071	A5SS&ES	0.25	50	50	ENSMUST00000114545.8	ENSMUSG00000073096.12	Lrrc61	chr6	protein_coding	leucine rich repeat containing 61
chr6	48531895	48533889	+	48531916	48533889	A5SS	0.33	50	50	ENSMUST00000114545.8	ENSMUSG00000073096.12	Lrrc61	chr6	protein_coding	leucine rich repeat containing 61
chr6	48531895	48545071	+	48534028	48545071	A5SS&ES	0.25	50	50	ENSMUST00000114545.8	ENSMUSG00000073096.12	Lrrc61	chr6	protein_coding	leucine rich repeat containing 61
chr6	48531827	48545071	+	48531916	48545071	A5SS	0.25	50	50	ENSMUST00000153222.2	ENSMUSG00000073096.12	Lrrc61	chr6	protein_coding	leucine rich repeat containing 61
chr6	48531895	48545071	+	48531916	48545071	A5SS	0.25	50	50	ENSMUST00000153222.2	ENSMUSG00000073096.12	Lrrc61	chr6	protein_coding	leucine rich repeat containing 61
chr6	48531895;48534028	48533889;48545071	+	48531895	48545071	cassetteExon	0.5	100	100	ENSMUST00000204071.2	ENSMUSG00000073096.12	Lrrc61	chr6	protein_coding	leucine rich repeat containing 61
chr6	48531827	48545071	+	48531895	48545071	A5SS	0.25	50	50	ENSMUST00000204071.2	ENSMUSG00000073096.12	Lrrc61	chr6	protein_coding	leucine rich repeat containing 61
chr6	48531827;48534028	48533889;48545071	+	48531827	48545071	cassetteExon	0.5	100	100	ENSMUST00000101436.3	ENSMUSG00000073096.12	Lrrc61	chr6	protein_coding	leucine rich repeat containing 61
chr6	48531895	48533889	+	48531827	48533889	A5SS	0.33	50	50	ENSMUST00000146245.4	ENSMUSG00000073096.12	Lrrc61	chr6	protein_coding	leucine rich repeat containing 61
chr6	48531916	48545071	+	48534028	48545071	A5SS&ES	0.25	50	50	ENSMUST00000146245.4	ENSMUSG00000073096.12	Lrrc61	chr6	protein_coding	leucine rich repeat containing 61
chr6	48549224	48549674	-	48549224	48549528	5pMXE	0.5	50	50	ENSMUST00000203541.3	ENSMUSG00000009281.7	Rarres2	chr6	protein_coding	retinoic acid receptor responder (tazarotene induced) 2
chr6	48546993	48547178	-	48546996	48547178	A3SS	0.5	50	50	ENSMUST00000009425.7	ENSMUSG00000009281.7	Rarres2	chr6	protein_coding	retinoic acid receptor responder (tazarotene induced) 2
chr6	48571910	48590112	+	48567015	48590112	A5SS	0.25	50	50	ENSMUST00000204521.2	ENSMUSG00000107588.2	Gm45021	chr6	protein_coding	predicted gene 45021
chr6	48579054	48590112	+	48567015	48590112	A5SS	0.25	50	50	ENSMUST00000204521.2	ENSMUSG00000107588.2	Gm45021	chr6	protein_coding	predicted gene 45021
chr6	48582572	48590112	+	48567015	48590112	A5SS	0.25	50	50	ENSMUST00000204521.2	ENSMUSG00000107588.2	Gm45021	chr6	protein_coding	predicted gene 45021
chr6	48570986;48571910	48571725;48573227	+	48570986	48573227	cassetteExon	0.5	100	100	ENSMUST00000154010.8	ENSMUSG00000052751.17	Repin1	chr6	protein_coding	replication initiator 1
chr6	48570986;48571910	48571796;48573227	+	48570986	48573227	cassetteExon	0.5	100	100	ENSMUST00000154010.8	ENSMUSG00000052751.17	Repin1	chr6	protein_coding	replication initiator 1
chr6	48571910	48590112	+	48571910	48573227	3pMXE	0.5	50	50	ENSMUST00000009420.15	ENSMUSG00000052751.17	Repin1	chr6	protein_coding	replication initiator 1
chr6	48570986	48571796	+	48570986	48571725	A3SS	0.33	50	50	ENSMUST00000009420.15	ENSMUSG00000052751.17	Repin1	chr6	protein_coding	replication initiator 1
chr6	48570986	48573227	+	48570986	48571725	3pMXE	0.33	50	50	ENSMUST00000130896.2	ENSMUSG00000052751.17	Repin1	chr6	protein_coding	replication initiator 1
chr6	48570986	48573227	+	48571910	48573227	5pMXE	0.5	50	50	ENSMUST00000150030.2	ENSMUSG00000052751.17	Repin1	chr6	protein_coding	replication initiator 1
chr6	48579054	48590112	+	48571910	48590112	A5SS	0.33	50	50	ENSMUST00000204879.2	ENSMUSG00000107789.2	Gm44965	chr6	protein_coding	predicted gene 44965
chr6	48582572	48590112	+	48571910	48590112	A5SS	0.33	50	50	ENSMUST00000204879.2	ENSMUSG00000107789.2	Gm44965	chr6	protein_coding	predicted gene 44965
chr6	48570986	48573227	+	48570986	48571796	A3SS&ES	0.33	50	50	ENSMUST00000204121.2	ENSMUSG00000107789.2	Gm44965	chr6	protein_coding	predicted gene 44965
chr6	48582572	48590112	+	48579054	48590112	A5SS	0.25	50	50	ENSMUST00000204095.3	ENSMUSG00000007216.7	Zfp775	chr6	protein_coding	zinc finger protein 775
chr6	48604254	48606062	+	48604047	48606062	A5SS	0.25	50	50	ENSMUST00000095938.10	ENSMUSG00000053297.15	AI854703	chr6	protein_coding	expressed sequence AI854703
chr6	48604306	48606062	+	48604047	48606062	A5SS	0.25	50	50	ENSMUST00000095938.10	ENSMUSG00000053297.15	AI854703	chr6	protein_coding	expressed sequence AI854703
chr6	48605503	48606062	+	48604047	48606062	A5SS	0.25	50	50	ENSMUST00000095938.10	ENSMUSG00000053297.15	AI854703	chr6	protein_coding	expressed sequence AI854703
chr6	48604254	48606062	+	48604306	48606062	A5SS	0.25	50	50	ENSMUST00000203088.3	ENSMUSG00000053297.15	AI854703	chr6	protein_coding	expressed sequence AI854703
chr6	48605503	48606062	+	48604306	48606062	A5SS	0.25	50	50	ENSMUST00000203088.3	ENSMUSG00000053297.15	AI854703	chr6	protein_coding	expressed sequence AI854703
chr6	48605503	48606062	+	48604254	48606062	A5SS	0.25	50	50	ENSMUST00000204958.2	ENSMUSG00000053297.15	AI854703	chr6	protein_coding	expressed sequence AI854703
chr6	48628037	48633464	+	48628037	48632976	A3SS	0.5	50	50	ENSMUST00000203083.3	ENSMUSG00000064262.8	Gimap8	chr6	protein_coding	GTPase, IMAP family member 8
chr6	48667391	48668300	+	48667391	48667776	A3SS	0.5	50	50	ENSMUST00000118802.8	ENSMUSG00000054435.17	Gimap4	chr6	protein_coding	GTPase, IMAP family member 4
chr6	48667882	48668346	+	48667882	48668332	A3SS	0.5	50	50	ENSMUST00000067506.14	ENSMUSG00000054435.17	Gimap4	chr6	protein_coding	GTPase, IMAP family member 4
chr6	48680769	48681356	-	48679757	48681356	A3SS	0.5	50	50	ENSMUST00000053661.7	ENSMUSG00000047867.12	Gimap6	chr6	protein_coding	GTPase, IMAP family member 6
chr6	48681440	48682867	-	48681440	48684893	A5SS	0.5	50	50	ENSMUST00000053661.7	ENSMUSG00000047867.12	Gimap6	chr6	protein_coding	GTPase, IMAP family member 6
chr6	48695635	48700072	+	48695635	48706155	A3SS	0.33	50	50	ENSMUST00000127537.6	ENSMUSG00000098715.7	Gm28053	chr6	protein_coding	predicted gene, 28053
chr6	48695635	48700383	+	48695635	48706155	A3SS	0.33	50	50	ENSMUST00000127537.6	ENSMUSG00000098715.7	Gm28053	chr6	protein_coding	predicted gene, 28053
chr6	48718351	48719219	+	48718351	48727388	A3SS	0.33	50	50	ENSMUST00000127537.6	ENSMUSG00000098715.7	Gm28053	chr6	protein_coding	predicted gene, 28053
chr6	48718351	48719433	+	48718351	48727388	A3SS	0.33	50	50	ENSMUST00000127537.6	ENSMUSG00000098715.7	Gm28053	chr6	protein_coding	predicted gene, 28053
chr6	48716090	48718254	+	48706202	48718254	A5SS	0.5	50	50	ENSMUST00000127537.6	ENSMUSG00000098715.7	Gm28053	chr6	protein_coding	predicted gene, 28053
chr6	48723364	48727388	+	48718351	48727388	A5SS	0.5	50	50	ENSMUST00000127537.6	ENSMUSG00000098715.7	Gm28053	chr6	protein_coding	predicted gene, 28053
chr6	48716090	48718260	+	48716090	48718254	A3SS	0.5	50	50	ENSMUST00000204408.2	ENSMUSG00000098715.7	Gm28053	chr6	protein_coding	predicted gene, 28053
chr6	48695635;48700158	48700072;48700383	+	48695635	48700383	cassetteExon	0.5	100	100	ENSMUST00000052503.8	ENSMUSG00000043931.11	Gimap7	chr6	protein_coding	GTPase, IMAP family member 7
chr6	48718351	48719219	+	48718351	48719433	A3SS	0.33	50	50	ENSMUST00000054368.7	ENSMUSG00000090019.6	Gimap1	chr6	protein_coding	GTPase, IMAP family member 1
chr6	48723364	48724047	+	48723364	48727388	A3SS	0.33	50	50	ENSMUST00000055558.6	ENSMUSG00000043505.9	Gimap5	chr6	protein_coding	GTPase, IMAP family member 5
chr6	48723364	48724215	+	48723364	48727388	A3SS	0.33	50	50	ENSMUST00000055558.6	ENSMUSG00000043505.9	Gimap5	chr6	protein_coding	GTPase, IMAP family member 5
chr6	48723364	48724215	+	48723364	48724047	A3SS	0.33	50	50	ENSMUST00000147047.2	ENSMUSG00000043505.9	Gimap5	chr6	protein_coding	GTPase, IMAP family member 5
chr6	48813271;48817387	48817295;48817930	-	48813271;48815299	48815106;48817930	MXE	0.5	100	100	ENSMUST00000166247.8	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48815299;48817387	48817295;48817930	-	48815299	48817930	cassetteExon	0.5	100	100	ENSMUST00000166247.8	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48815296	48817930	-	48815299	48817930	A3SS	0.33	50	50	ENSMUST00000166247.8	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48815299	48816272	-	48815299	48817930	A5SS	0.25	50	50	ENSMUST00000166247.8	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48815299	48818282	-	48815299	48817930	A5SS	0.25	50	50	ENSMUST00000166247.8	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48813271	48817295	-	48813271;48815299	48815106;48817295	ES	0.25	50	50	ENSMUST00000164733.4	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48815299	48817930	-	48815299	48817295	5pMXE	0.25	50	50	ENSMUST00000164733.4	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48815299	48818282	-	48815299	48817295	5pMXE	0.25	50	50	ENSMUST00000164733.4	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48815299;48816379	48816272;48817295	-	48815299	48817295	cassetteExon	0.5	100	100	ENSMUST00000164733.4	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48815296	48817295	-	48815299	48817295	A3SS	0.25	50	50	ENSMUST00000164733.4	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48817387	48818282	-	48817387	48817930	5pMXE	0.33	50	50	ENSMUST00000101429.11	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48815296	48817930	-	48817387	48817930	A3SS&ES	0.33	50	50	ENSMUST00000101429.11	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48817387	48817634	-	48817387	48817930	A5SS	0.33	50	50	ENSMUST00000101429.11	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48815296	48817295	-	48815296;48816379	48816272;48817295	ES	0.25	50	50	ENSMUST00000203355.3	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48815299	48816272	-	48815296	48816272	A3SS	0.5	50	50	ENSMUST00000203355.3	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48815299	48817295	-	48816379	48817295	A3SS&ES	0.25	50	50	ENSMUST00000203355.3	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48815299	48818282	-	48817387	48818282	A3SS&ES	0.5	50	50	ENSMUST00000203355.3	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48815296	48817634	-	48815296	48816272	A5SS&ES	0.25	50	50	ENSMUST00000203355.3	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48815296	48817930	-	48815296	48816272	A5SS&ES	0.25	50	50	ENSMUST00000203355.3	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48817387	48817634	-	48817387	48818282	A5SS	0.33	50	50	ENSMUST00000203355.3	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48813271;48817387	48817295;48817930	-	48813271;48815296	48815106;48817930	MXE	0.5	100	100	ENSMUST00000204073.3	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48815296;48817387	48817295;48817930	-	48815296	48817930	cassetteExon	0.5	100	100	ENSMUST00000204073.3	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48815296	48817634	-	48815296	48817930	A5SS	0.25	50	50	ENSMUST00000204073.3	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48813271;48815296	48815106;48817295	-	48813271	48817295	cassetteExon	0.5	100	100	ENSMUST00000204783.3	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48816379	48817295	-	48813271	48817295	A3SS	0.25	50	50	ENSMUST00000204783.3	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48813271;48817387	48817295;48817634	-	48813271;48815296	48815106;48817634	MXE	0.5	100	100	ENSMUST00000205159.3	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48815296;48817387	48817295;48817634	-	48815296	48817634	cassetteExon	0.5	100	100	ENSMUST00000205159.3	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48815299	48817930	-	48817387	48817930	A3SS&ES	0.33	50	50	ENSMUST00000203229.3	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48815296	48817634	-	48815296	48817295	A5SS&ES	0.25	50	50	ENSMUST00000203229.3	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48813271;48817387	48817295;48818282	-	48813271;48815299	48815106;48818282	MXE	0.5	100	100	ENSMUST00000205147.3	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48815299;48817387	48817295;48818282	-	48815299	48818282	cassetteExon	0.5	100	100	ENSMUST00000205147.3	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48815299	48816272	-	48815299	48818282	A5SS	0.25	50	50	ENSMUST00000205147.3	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48815296	48817634	-	48817387	48817634	A3SS&ES	0.5	50	50	ENSMUST00000203265.3	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48815296	48817295	-	48816379	48817295	A3SS&ES	0.25	50	50	ENSMUST00000203501.2	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48815296	48817930	-	48815296	48817295	5pMXE	0.25	50	50	ENSMUST00000203618.2	ENSMUSG00000029810.16	Tmem176b	chr6	protein_coding	transmembrane protein 176B
chr6	48818644	48819138	+	48818523	48819138	A5SS	0.33	50	50	ENSMUST00000204400.2	ENSMUSG00000023367.15	Tmem176a	chr6	protein_coding	transmembrane protein 176A
chr6	48818753	48819138	+	48818523	48819138	A5SS	0.33	50	50	ENSMUST00000204400.2	ENSMUSG00000023367.15	Tmem176a	chr6	protein_coding	transmembrane protein 176A
chr6	48819633	48820283	+	48819633	48820719	A3SS	0.5	50	50	ENSMUST00000101426.11	ENSMUSG00000023367.15	Tmem176a	chr6	protein_coding	transmembrane protein 176A
chr6	48818753	48819138	+	48818644	48819138	A5SS	0.33	50	50	ENSMUST00000168406.4	ENSMUSG00000023367.15	Tmem176a	chr6	protein_coding	transmembrane protein 176A
chr6	48837541	48841192	+	48837541;48839845	48839757;48841192	ES	0.5	50	50	ENSMUST00000205047.2	ENSMUSG00000108084.2	Gm7932	chr6	lncRNA	predicted gene 7932
chr6	48872232	48882122	+	48849953	48882122	A5SS	0.33	50	50	ENSMUST00000204856.2	ENSMUSG00000029811.15	Aoc1	chr6	protein_coding	amine oxidase, copper-containing 1
chr6	48882024	48882122	+	48849953	48882122	A5SS	0.33	50	50	ENSMUST00000204856.2	ENSMUSG00000029811.15	Aoc1	chr6	protein_coding	amine oxidase, copper-containing 1
chr6	48882024	48882122	+	48872232	48882122	A5SS	0.33	50	50	ENSMUST00000031835.14	ENSMUSG00000029811.15	Aoc1	chr6	protein_coding	amine oxidase, copper-containing 1
chr6	48954714	48955006	+	48954707	48955006	A5SS	0.5	50	50	ENSMUST00000184917.6	ENSMUSG00000068536.12	Doxl2	chr6	protein_coding	diamine oxidase-like protein 2
chr6	49032648	49047051	+	49032648	49033095	3pMXE	0.5	50	50	ENSMUST00000031840.10	ENSMUSG00000029816.11	Gpnmb	chr6	protein_coding	glycoprotein (transmembrane) nmb
chr6	49013726;49019298	49019203;49019701	+	49013726	49019701	cassetteExon	0.5	100	100	ENSMUST00000031840.10	ENSMUSG00000029816.11	Gpnmb	chr6	protein_coding	glycoprotein (transmembrane) nmb
chr6	49051037	49059779	+	49051037;49052198	49052020;49059779	ES	0.5	50	50	ENSMUST00000128616.6	ENSMUSG00000029815.13	Malsu1	chr6	protein_coding	mitochondrial assembly of ribosomal large subunit 1
chr6	49052198	49056974	+	49052198	49059779	A3SS	0.5	50	50	ENSMUST00000128616.6	ENSMUSG00000029815.13	Malsu1	chr6	protein_coding	mitochondrial assembly of ribosomal large subunit 1
chr6	49145039	49145404	-	49111832	49145404	A3SS	0.5	50	50	ENSMUST00000031838.9	ENSMUSG00000029814.11	Igf2bp3	chr6	protein_coding	insulin-like growth factor 2 mRNA binding protein 3
chr6	49085994	49087723	-	49085994	49094086	A5SS	0.5	50	50	ENSMUST00000031838.9	ENSMUSG00000029814.11	Igf2bp3	chr6	protein_coding	insulin-like growth factor 2 mRNA binding protein 3
chr6	49190261	49190579	-	49190261	49191231	A5SS	0.5	50	50	ENSMUST00000031838.9	ENSMUSG00000029814.11	Igf2bp3	chr6	protein_coding	insulin-like growth factor 2 mRNA binding protein 3
chr6	49229449;49230042	49229737;49240772	-	49229449	49240772	cassetteExon	0.5	100	100	ENSMUST00000204189.3	ENSMUSG00000029817.12	Tra2a	chr6	protein_coding	transformer 2 alpha
chr6	49221869	49222410	-	49221869	49222416	A5SS	0.5	50	50	ENSMUST00000204189.3	ENSMUSG00000029817.12	Tra2a	chr6	protein_coding	transformer 2 alpha
chr6	49311231;49316266	49316197;49316760	+	49311231	49316760	cassetteExon	0.5	100	100	ENSMUST00000055559.8	ENSMUSG00000050786.9	Ccdc126	chr6	protein_coding	coiled-coil domain containing 126
chr6	49296414	49310857	+	49296414	49310845	A3SS	0.5	50	50	ENSMUST00000055559.8	ENSMUSG00000050786.9	Ccdc126	chr6	protein_coding	coiled-coil domain containing 126
chr6	49360013	49365751	+	49360013;49362389	49362307;49365751	ES	0.5	50	50	ENSMUST00000060561.15	ENSMUSG00000047115.16	Fam221a	chr6	protein_coding	family with sequence similarity 221, member A
chr6	49344907	49348396	+	49344907	49349502	A3SS	0.5	50	50	ENSMUST00000060561.15	ENSMUSG00000047115.16	Fam221a	chr6	protein_coding	family with sequence similarity 221, member A
chr6	49356201	49359897	+	49355536	49359897	A5SS	0.5	50	50	ENSMUST00000060561.15	ENSMUSG00000047115.16	Fam221a	chr6	protein_coding	family with sequence similarity 221, member A
chr6	49360013	49365751	+	49360013	49362307	3pMXE	0.5	50	50	ENSMUST00000142950.2	ENSMUSG00000047115.16	Fam221a	chr6	protein_coding	family with sequence similarity 221, member A
chr6	49360013	49365751	+	49362389	49365751	5pMXE	0.5	50	50	ENSMUST00000141910.2	ENSMUSG00000047115.16	Fam221a	chr6	protein_coding	family with sequence similarity 221, member A
chr6	49424327	49442403	+	49424327;49434712	49434590;49442403	ES	0.5	50	50	ENSMUST00000024171.14	ENSMUSG00000023403.15	Stk31	chr6	protein_coding	serine threonine kinase 31
chr6	49434712	49446062	+	49434712;49442471	49442403;49446062	ES	0.5	50	50	ENSMUST00000024171.14	ENSMUSG00000023403.15	Stk31	chr6	protein_coding	serine threonine kinase 31
chr6	49424327;49442471	49442403;49446062	+	49424327;49434712	49434590;49446062	MXE	0.5	100	100	ENSMUST00000163954.8	ENSMUSG00000023403.15	Stk31	chr6	protein_coding	serine threonine kinase 31
chr6	50087444	50122754	+	50087444;50120764	50120699;50122754	ES	0.5	50	50	ENSMUST00000166318.8	ENSMUSG00000038388.15	Mpp6	chr6	protein_coding	membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
chr6	50140629	50155369	+	50140629;50153898	50153857;50155369	ES	0.5	50	50	ENSMUST00000166318.8	ENSMUSG00000038388.15	Mpp6	chr6	protein_coding	membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
chr6	50122872;50129003	50128919;50135662	+	50122872	50135662	cassetteExon	0.5	100	100	ENSMUST00000166318.8	ENSMUSG00000038388.15	Mpp6	chr6	protein_coding	membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
chr6	50087434	50120699	+	50087444	50120699	A5SS	0.33	50	50	ENSMUST00000166318.8	ENSMUSG00000038388.15	Mpp6	chr6	protein_coding	membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
chr6	50088107	50120699	+	50087444	50120699	A5SS	0.33	50	50	ENSMUST00000166318.8	ENSMUSG00000038388.15	Mpp6	chr6	protein_coding	membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
chr6	50157437	50157571	+	50157255	50157571	A5SS	0.5	50	50	ENSMUST00000166318.8	ENSMUSG00000038388.15	Mpp6	chr6	protein_coding	membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
chr6	50087444	50122754	+	50120764	50122754	A5SS&ES	0.5	50	50	ENSMUST00000036225.15	ENSMUSG00000038388.15	Mpp6	chr6	protein_coding	membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
chr6	50088107	50120699	+	50087434	50120699	A5SS	0.33	50	50	ENSMUST00000036225.15	ENSMUSG00000038388.15	Mpp6	chr6	protein_coding	membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
chr6	50180353	50196217	-	50193403	50196217	A3SS&ES	0.5	50	50	ENSMUST00000165099.8	ENSMUSG00000029821.16	Gsdme	chr6	protein_coding	gasdermin E
chr6	50185186	50193330	-	50167962	50193330	A3SS	0.5	50	50	ENSMUST00000165099.8	ENSMUSG00000029821.16	Gsdme	chr6	protein_coding	gasdermin E
chr6	50305784	50313195	-	50305784;50310273	50310166;50313195	ES	0.5	50	50	ENSMUST00000114468.9	ENSMUSG00000029822.16	Osbpl3	chr6	protein_coding	oxysterol binding protein-like 3
chr6	50347338	50373836	-	50347338	50359770	5pMXE	0.25	50	50	ENSMUST00000114468.9	ENSMUSG00000029822.16	Osbpl3	chr6	protein_coding	oxysterol binding protein-like 3
chr6	50347338	50405309	-	50347338	50359770	5pMXE	0.25	50	50	ENSMUST00000114468.9	ENSMUSG00000029822.16	Osbpl3	chr6	protein_coding	oxysterol binding protein-like 3
chr6	50347338	50432805	-	50347338	50359770	5pMXE	0.25	50	50	ENSMUST00000114468.9	ENSMUSG00000029822.16	Osbpl3	chr6	protein_coding	oxysterol binding protein-like 3
chr6	50322010;50323083	50322991;50323308	-	50322010	50323308	cassetteExon	0.5	100	100	ENSMUST00000114468.9	ENSMUSG00000029822.16	Osbpl3	chr6	protein_coding	oxysterol binding protein-like 3
chr6	50313309	50321854	-	50313325	50321854	A3SS	0.5	50	50	ENSMUST00000114468.9	ENSMUSG00000029822.16	Osbpl3	chr6	protein_coding	oxysterol binding protein-like 3
chr6	50347338	50432805	-	50347338;50405400	50405309;50432805	ES	0.5	50	50	ENSMUST00000071728.11	ENSMUSG00000029822.16	Osbpl3	chr6	protein_coding	oxysterol binding protein-like 3
chr6	50389162	50405309	-	50347338	50405309	A3SS	0.5	50	50	ENSMUST00000071728.11	ENSMUSG00000029822.16	Osbpl3	chr6	protein_coding	oxysterol binding protein-like 3
chr6	50347338	50373836	-	50347338	50405309	A5SS	0.25	50	50	ENSMUST00000071728.11	ENSMUSG00000029822.16	Osbpl3	chr6	protein_coding	oxysterol binding protein-like 3
chr6	50325118	50328824	-	50322010	50328824	A3SS	0.5	50	50	ENSMUST00000203907.3	ENSMUSG00000029822.16	Osbpl3	chr6	protein_coding	oxysterol binding protein-like 3
chr6	50322010	50322991	-	50322010	50328824	A5SS	0.33	50	50	ENSMUST00000203907.3	ENSMUSG00000029822.16	Osbpl3	chr6	protein_coding	oxysterol binding protein-like 3
chr6	50322010	50323308	-	50322010	50328824	A5SS	0.33	50	50	ENSMUST00000203907.3	ENSMUSG00000029822.16	Osbpl3	chr6	protein_coding	oxysterol binding protein-like 3
chr6	50347338	50373836	-	50347338	50432805	A5SS	0.25	50	50	ENSMUST00000146341.4	ENSMUSG00000029822.16	Osbpl3	chr6	protein_coding	oxysterol binding protein-like 3
chr6	50544002;50552512	50552446;50566889	+	50544002	50566889	cassetteExon	0.5	100	100	ENSMUST00000147260.8	ENSMUSG00000085776.9	5430402O13Rik	chr6	lncRNA	RIKEN cDNA 5430402O13 gene
chr6	50753383	50775747	+	50753383;50773869	50773774;50775747	ES	0.5	50	50	ENSMUST00000205217.3	ENSMUSG00000107667.3	C530044C16Rik	chr6	lncRNA	RIKEN cDNA C530044C16 gene
chr6	50775968	50790692	+	50775968	50791124	A3SS	0.5	50	50	ENSMUST00000205217.3	ENSMUSG00000107667.3	C530044C16Rik	chr6	lncRNA	RIKEN cDNA C530044C16 gene
chr6	51410393	51413679	+	51410393	51427947	A3SS	0.5	50	50	ENSMUST00000005103.12	ENSMUSG00000029832.17	Nfe2l3	chr6	protein_coding	nuclear factor, erythroid derived 2, like 3
chr6	51438413;51439035	51438900;51440391	-	51438413	51440391	cassetteExon	0.5	100	100	ENSMUST00000069949.13	ENSMUSG00000004980.17	Hnrnpa2b1	chr6	protein_coding	heterogeneous nuclear ribonucleoprotein A2/B1
chr6	51441191;51441527	51441408;51442159	-	51441191	51442159	cassetteExon	0.5	100	100	ENSMUST00000069949.13	ENSMUSG00000004980.17	Hnrnpa2b1	chr6	protein_coding	heterogeneous nuclear ribonucleoprotein A2/B1
chr6	51444275;51444406	51444371;51446651	-	51444275	51446651	cassetteExon	0.5	100	100	ENSMUST00000069949.13	ENSMUSG00000004980.17	Hnrnpa2b1	chr6	protein_coding	heterogeneous nuclear ribonucleoprotein A2/B1
chr6	51440234	51440391	-	51438413	51440391	A3SS	0.33	50	50	ENSMUST00000069949.13	ENSMUSG00000004980.17	Hnrnpa2b1	chr6	protein_coding	heterogeneous nuclear ribonucleoprotein A2/B1
chr6	51440234	51440391	-	51439035	51440391	A3SS	0.33	50	50	ENSMUST00000203954.3	ENSMUSG00000004980.17	Hnrnpa2b1	chr6	protein_coding	heterogeneous nuclear ribonucleoprotein A2/B1
chr6	51438413	51440391	-	51438413	51438900	5pMXE	0.5	50	50	ENSMUST00000204885.2	ENSMUSG00000004980.17	Hnrnpa2b1	chr6	protein_coding	heterogeneous nuclear ribonucleoprotein A2/B1
chr6	51441191	51442159	-	51441191	51441408	A5SS&ES	0.5	50	50	ENSMUST00000203253.2	ENSMUSG00000004980.17	Hnrnpa2b1	chr6	protein_coding	heterogeneous nuclear ribonucleoprotein A2/B1
chr6	51452353	51458704	+	51452353;51455580	51455418;51458704	ES	0.5	50	50	ENSMUST00000094623.10	ENSMUSG00000029836.16	Cbx3	chr6	protein_coding	chromobox 3
chr6	51447714	51448796	+	51447411	51448796	A5SS	0.25	50	50	ENSMUST00000094623.10	ENSMUSG00000029836.16	Cbx3	chr6	protein_coding	chromobox 3
chr6	51447719	51448796	+	51447411	51448796	A5SS	0.25	50	50	ENSMUST00000094623.10	ENSMUSG00000029836.16	Cbx3	chr6	protein_coding	chromobox 3
chr6	51447864	51448796	+	51447411	51448796	A5SS	0.25	50	50	ENSMUST00000094623.10	ENSMUSG00000029836.16	Cbx3	chr6	protein_coding	chromobox 3
chr6	51447714	51448796	+	51447719	51448796	A5SS	0.25	50	50	ENSMUST00000031862.14	ENSMUSG00000029836.16	Cbx3	chr6	protein_coding	chromobox 3
chr6	51447864	51448796	+	51447719	51448796	A5SS	0.25	50	50	ENSMUST00000031862.14	ENSMUSG00000029836.16	Cbx3	chr6	protein_coding	chromobox 3
chr6	51447864	51448796	+	51447714	51448796	A5SS	0.25	50	50	ENSMUST00000114445.8	ENSMUSG00000029836.16	Cbx3	chr6	protein_coding	chromobox 3
chr6	51452353	51458704	+	51452353	51455418	3pMXE	0.5	50	50	ENSMUST00000141711.3	ENSMUSG00000029836.16	Cbx3	chr6	protein_coding	chromobox 3
chr6	51552969	51557282	+	51552969;51556930	51556830;51557282	ES	0.5	50	50	ENSMUST00000049152.15	ENSMUSG00000038301.16	Snx10	chr6	protein_coding	sorting nexin 10
chr6	51501361	51538998	+	51501014	51538998	A5SS	0.25	50	50	ENSMUST00000049152.15	ENSMUSG00000038301.16	Snx10	chr6	protein_coding	sorting nexin 10
chr6	51521629	51538998	+	51501014	51538998	A5SS	0.25	50	50	ENSMUST00000049152.15	ENSMUSG00000038301.16	Snx10	chr6	protein_coding	sorting nexin 10
chr6	51521732	51538998	+	51501014	51538998	A5SS	0.25	50	50	ENSMUST00000049152.15	ENSMUSG00000038301.16	Snx10	chr6	protein_coding	sorting nexin 10
chr6	51521629	51538998	+	51501361	51538998	A5SS	0.25	50	50	ENSMUST00000140560.8	ENSMUSG00000038301.16	Snx10	chr6	protein_coding	sorting nexin 10
chr6	51521732	51538998	+	51501361	51538998	A5SS	0.25	50	50	ENSMUST00000140560.8	ENSMUSG00000038301.16	Snx10	chr6	protein_coding	sorting nexin 10
chr6	51521732	51538998	+	51521629	51538998	A5SS	0.33	50	50	ENSMUST00000137212.8	ENSMUSG00000038301.16	Snx10	chr6	protein_coding	sorting nexin 10
chr6	51856828	51885349	-	51856828;51885001	51884867;51885349	ES	0.5	50	50	ENSMUST00000204778.3	ENSMUSG00000059182.9	Skap2	chr6	protein_coding	src family associated phosphoprotein 2
chr6	51980714	51989315	-	51980735	51989315	A3SS	0.5	50	50	ENSMUST00000204778.3	ENSMUSG00000059182.9	Skap2	chr6	protein_coding	src family associated phosphoprotein 2
chr6	51837079	51848817	-	51837079	51851455	A5SS	0.5	50	50	ENSMUST00000204778.3	ENSMUSG00000059182.9	Skap2	chr6	protein_coding	src family associated phosphoprotein 2
chr6	51899320	51910350	-	51899320	51972997	A5SS	0.5	50	50	ENSMUST00000204778.3	ENSMUSG00000059182.9	Skap2	chr6	protein_coding	src family associated phosphoprotein 2
chr6	52083876	52090323	+	52083876	52089332	3pMXE	0.33	50	50	ENSMUST00000125374.8	ENSMUSG00000085412.8	Halr1	chr6	lncRNA	Hoxa adjacent long noncoding RNA 1
chr6	52083876	52088921	+	52083876	52089332	A3SS	0.33	50	50	ENSMUST00000125374.8	ENSMUSG00000085412.8	Halr1	chr6	lncRNA	Hoxa adjacent long noncoding RNA 1
chr6	52083876	52088921	+	52083876	52090323	A3SS	0.33	50	50	ENSMUST00000189071.7	ENSMUSG00000085412.8	Halr1	chr6	lncRNA	Hoxa adjacent long noncoding RNA 1
chr6	52135666	52138911	+	52135666;52138487	52138219;52138911	ES	0.5	50	50	ENSMUST00000132559.2	ENSMUSG00000087658.3	Hotairm1	chr6	lncRNA	Hoxa transcript antisense RNA, myeloid-specific 1
chr6	52140605	52160688	-	52140605	52141246	5pMXE	0.5	50	50	ENSMUST00000014848.11	ENSMUSG00000014704.11	Hoxa2	chr6	protein_coding	homeobox A2
chr6	52149749	52160688	-	52140605	52160688	A3SS	0.33	50	50	ENSMUST00000128102.4	ENSMUSG00000101298.2	Gm28308	chr6	protein_coding	predicted gene 28308
chr6	52158657	52160688	-	52140605	52160688	A3SS	0.33	50	50	ENSMUST00000128102.4	ENSMUSG00000101298.2	Gm28308	chr6	protein_coding	predicted gene 28308
chr6	52160770	52161522	-	52160770	52177817	A5SS	0.5	50	50	ENSMUST00000128102.4	ENSMUSG00000101298.2	Gm28308	chr6	protein_coding	predicted gene 28308
chr6	52158657	52160688	-	52149749	52160688	A3SS	0.5	50	50	ENSMUST00000114434.9	ENSMUSG00000079560.14	Hoxa3	chr6	protein_coding	homeobox A3
chr6	52152275	52189366	+	52152275	52169505	3pMXE	0.5	50	50	ENSMUST00000139055.2	ENSMUSG00000085696.9	Hoxaas3	chr6	lncRNA	Hoxa cluster antisense RNA 3
chr6	52178271	52189366	+	52152275	52189366	A5SS	0.5	50	50	ENSMUST00000136806.8	ENSMUSG00000085696.9	Hoxaas3	chr6	lncRNA	Hoxa cluster antisense RNA 3
chr6	52161691	52166331	+	52162679	52166331	A5SS	0.5	50	50	ENSMUST00000191453.2	ENSMUSG00000101451.2	Gm29430	chr6	lncRNA	predicted gene 29430
chr6	52193639	52194010	-	52193010	52194010	A3SS	0.5	50	50	ENSMUST00000153280.2	ENSMUSG00000038236.9	Hoxa7	chr6	protein_coding	homeobox A7
chr6	52194277	52194882	-	52194277	52194913	A5SS	0.5	50	50	ENSMUST00000153280.2	ENSMUSG00000038236.9	Hoxa7	chr6	protein_coding	homeobox A7
chr6	52195064	52195614	-	52195064	52197303	A5SS	0.5	50	50	ENSMUST00000153280.2	ENSMUSG00000038236.9	Hoxa7	chr6	protein_coding	homeobox A7
chr6	52194277	52194882	-	52194277	52198527	A5SS	0.33	50	50	ENSMUST00000150041.4	ENSMUSG00000038236.9	Hoxa7	chr6	protein_coding	homeobox A7
chr6	52194277	52194913	-	52194277	52198527	A5SS	0.33	50	50	ENSMUST00000150041.4	ENSMUSG00000038236.9	Hoxa7	chr6	protein_coding	homeobox A7
chr6	52202597	52202771	-	52202597	52208002	A5SS	0.33	50	50	ENSMUST00000154641.8	ENSMUSG00000038227.16	Hoxa9	chr6	protein_coding	homeobox A9
chr6	52202597	52207048	-	52202597	52208002	A5SS	0.33	50	50	ENSMUST00000154641.8	ENSMUSG00000038227.16	Hoxa9	chr6	protein_coding	homeobox A9
chr6	52202597	52207048	-	52202597	52202771	5pMXE	0.33	50	50	ENSMUST00000114425.3	ENSMUSG00000038227.16	Hoxa9	chr6	protein_coding	homeobox A9
chr6	52209760	52217258	-	52209760	52210939	5pMXE	0.25	50	50	ENSMUST00000125581.2	ENSMUSG00000000938.12	Hoxa10	chr6	protein_coding	homeobox A10
chr6	52209760	52217430	-	52209760	52210939	5pMXE	0.25	50	50	ENSMUST00000125581.2	ENSMUSG00000000938.12	Hoxa10	chr6	protein_coding	homeobox A10
chr6	52209760	52210177	-	52209760	52210939	A5SS	0.25	50	50	ENSMUST00000125581.2	ENSMUSG00000000938.12	Hoxa10	chr6	protein_coding	homeobox A10
chr6	52209760	52217258	-	52209760	52210177	5pMXE	0.25	50	50	ENSMUST00000126402.2	ENSMUSG00000000938.12	Hoxa10	chr6	protein_coding	homeobox A10
chr6	52209760	52217430	-	52209760	52210177	5pMXE	0.25	50	50	ENSMUST00000126402.2	ENSMUSG00000000938.12	Hoxa10	chr6	protein_coding	homeobox A10
chr6	52209760	52217430	-	52209760	52217258	A5SS	0.25	50	50	ENSMUST00000121043.2	ENSMUSG00000000938.12	Hoxa10	chr6	protein_coding	homeobox A10
chr6	52223180	52223643	+	52222636	52223643	A5SS	0.33	50	50	ENSMUST00000156515.9	ENSMUSG00000086427.9	Hoxa11os	chr6	lncRNA	homeobox A11, opposite strand
chr6	52223511	52223643	+	52222636	52223643	A5SS	0.33	50	50	ENSMUST00000156515.9	ENSMUSG00000086427.9	Hoxa11os	chr6	lncRNA	homeobox A11, opposite strand
chr6	52225514	52226064	+	52223788	52226064	A5SS	0.5	50	50	ENSMUST00000156515.9	ENSMUSG00000086427.9	Hoxa11os	chr6	lncRNA	homeobox A11, opposite strand
chr6	52223180	52223643	+	52223180;52223511	52223295;52223643	ES	0.33	50	50	ENSMUST00000134512.8	ENSMUSG00000086427.9	Hoxa11os	chr6	lncRNA	homeobox A11, opposite strand
chr6	52223180	52223617	+	52223180	52223295	A3SS&ES	0.33	50	50	ENSMUST00000134512.8	ENSMUSG00000086427.9	Hoxa11os	chr6	lncRNA	homeobox A11, opposite strand
chr6	52223180	52223643	+	52223180	52223617	A3SS	0.33	50	50	ENSMUST00000147174.3	ENSMUSG00000086427.9	Hoxa11os	chr6	lncRNA	homeobox A11, opposite strand
chr6	52237245	52237699	-	52237242	52237699	A3SS	0.5	50	50	ENSMUST00000172961.8	ENSMUSG00000038203.22	Hoxa13	chr6	protein_coding	homeobox A13
chr6	52240403	52242354	+	52239849	52242354	A5SS	0.5	50	50	ENSMUST00000152875.2	ENSMUSG00000055408.8	Hottip	chr6	lncRNA	Hoxa distal transcript antisense RNA
chr6	52287882;52289679	52289579;52290289	-	52287882;52289815	52289738;52290289	MXE	0.5	100	100	ENSMUST00000125305.2	ENSMUSG00000086126.2	Evx1os	chr6	lncRNA	even skipped homeotic gene 1, opposite strand
chr6	52291201	52292723	+	52291256	52292723	A5SS	0.5	50	50	ENSMUST00000031787.8	ENSMUSG00000005503.9	Evx1	chr6	protein_coding	even-skipped homeobox 1
chr6	52524047	52533423	-	52524047;52525956	52525800;52533423	ES	0.5	50	50	ENSMUST00000031788.9	ENSMUSG00000029776.12	Hibadh	chr6	protein_coding	3-hydroxyisobutyrate dehydrogenase
chr6	52524047	52533423	-	52525956	52533423	3pMXE	0.5	50	50	ENSMUST00000149471.2	ENSMUSG00000029776.12	Hibadh	chr6	protein_coding	3-hydroxyisobutyrate dehydrogenase
chr6	52690873	52698283	+	52690840	52698283	A5SS	0.25	50	50	ENSMUST00000080723.11	ENSMUSG00000004535.13	Tax1bp1	chr6	protein_coding	Tax1 (human T cell leukemia virus type I) binding protein 1
chr6	52691435	52698283	+	52690840	52698283	A5SS	0.25	50	50	ENSMUST00000080723.11	ENSMUSG00000004535.13	Tax1bp1	chr6	protein_coding	Tax1 (human T cell leukemia virus type I) binding protein 1
chr6	52691614	52698283	+	52690840	52698283	A5SS	0.25	50	50	ENSMUST00000080723.11	ENSMUSG00000004535.13	Tax1bp1	chr6	protein_coding	Tax1 (human T cell leukemia virus type I) binding protein 1
chr6	52718117	52718936	+	52716714	52718936	A5SS	0.5	50	50	ENSMUST00000080723.11	ENSMUSG00000004535.13	Tax1bp1	chr6	protein_coding	Tax1 (human T cell leukemia virus type I) binding protein 1
chr6	52691435	52698283	+	52690873	52698283	A5SS	0.25	50	50	ENSMUST00000149588.8	ENSMUSG00000004535.13	Tax1bp1	chr6	protein_coding	Tax1 (human T cell leukemia virus type I) binding protein 1
chr6	52691614	52698283	+	52690873	52698283	A5SS	0.25	50	50	ENSMUST00000149588.8	ENSMUSG00000004535.13	Tax1bp1	chr6	protein_coding	Tax1 (human T cell leukemia virus type I) binding protein 1
chr6	52691435	52698283	+	52691614	52698283	A5SS	0.25	50	50	ENSMUST00000138040.8	ENSMUSG00000004535.13	Tax1bp1	chr6	protein_coding	Tax1 (human T cell leukemia virus type I) binding protein 1
chr6	52754689	52789088	-	52754689	52755135	5pMXE	0.5	50	50	ENSMUST00000128282.4	ENSMUSG00000063568.12	Jazf1	chr6	protein_coding	JAZF zinc finger 1
chr6	52871056	53045438	-	52871056	52886433	5pMXE	0.5	50	50	ENSMUST00000136250.6	ENSMUSG00000063568.12	Jazf1	chr6	protein_coding	JAZF zinc finger 1
chr6	53264358	53352924	+	53264358;53346843	53346772;53352924	ES	0.5	50	50	ENSMUST00000205222.3	ENSMUSG00000053007.10	Creb5	chr6	protein_coding	cAMP responsive element binding protein 5
chr6	53353017;53365073	53364983;53365770	+	53353017	53365770	cassetteExon	0.5	100	100	ENSMUST00000205222.3	ENSMUSG00000053007.10	Creb5	chr6	protein_coding	cAMP responsive element binding protein 5
chr6	53264358	53264833	+	53264358	53346772	A3SS	0.25	50	50	ENSMUST00000205222.3	ENSMUSG00000053007.10	Creb5	chr6	protein_coding	cAMP responsive element binding protein 5
chr6	53264358	53274733	+	53264358	53346772	A3SS	0.25	50	50	ENSMUST00000205222.3	ENSMUSG00000053007.10	Creb5	chr6	protein_coding	cAMP responsive element binding protein 5
chr6	53267800	53346772	+	53264358	53346772	A5SS	0.25	50	50	ENSMUST00000205222.3	ENSMUSG00000053007.10	Creb5	chr6	protein_coding	cAMP responsive element binding protein 5
chr6	53287930	53346772	+	53264358	53346772	A5SS	0.25	50	50	ENSMUST00000205222.3	ENSMUSG00000053007.10	Creb5	chr6	protein_coding	cAMP responsive element binding protein 5
chr6	53342293	53346772	+	53264358	53346772	A5SS	0.25	50	50	ENSMUST00000205222.3	ENSMUSG00000053007.10	Creb5	chr6	protein_coding	cAMP responsive element binding protein 5
chr6	53365891	53371425	+	53365891	53424531	A3SS	0.2	50	50	ENSMUST00000203528.3	ENSMUSG00000053007.10	Creb5	chr6	protein_coding	cAMP responsive element binding protein 5
chr6	53365891	53371540	+	53365891	53424531	A3SS	0.2	50	50	ENSMUST00000203528.3	ENSMUSG00000053007.10	Creb5	chr6	protein_coding	cAMP responsive element binding protein 5
chr6	53365891	53389552	+	53365891	53424531	A3SS	0.2	50	50	ENSMUST00000203528.3	ENSMUSG00000053007.10	Creb5	chr6	protein_coding	cAMP responsive element binding protein 5
chr6	53365891	53410481	+	53365891	53424531	A3SS	0.2	50	50	ENSMUST00000203528.3	ENSMUSG00000053007.10	Creb5	chr6	protein_coding	cAMP responsive element binding protein 5
chr6	53587517	53622281	+	53587517	53657921	A3SS	0.5	50	50	ENSMUST00000203528.3	ENSMUSG00000053007.10	Creb5	chr6	protein_coding	cAMP responsive element binding protein 5
chr6	53550423	53581447	+	53424703	53581447	A5SS	0.33	50	50	ENSMUST00000203528.3	ENSMUSG00000053007.10	Creb5	chr6	protein_coding	cAMP responsive element binding protein 5
chr6	53558035	53581447	+	53424703	53581447	A5SS	0.33	50	50	ENSMUST00000203528.3	ENSMUSG00000053007.10	Creb5	chr6	protein_coding	cAMP responsive element binding protein 5
chr6	53365891	53389552	+	53365891	53371425	3pMXE	0.2	50	50	ENSMUST00000205200.3	ENSMUSG00000053007.10	Creb5	chr6	protein_coding	cAMP responsive element binding protein 5
chr6	53365891	53410481	+	53365891	53371425	3pMXE	0.2	50	50	ENSMUST00000205200.3	ENSMUSG00000053007.10	Creb5	chr6	protein_coding	cAMP responsive element binding protein 5
chr6	53365891	53371540	+	53365891	53371425	A3SS	0.2	50	50	ENSMUST00000205200.3	ENSMUSG00000053007.10	Creb5	chr6	protein_coding	cAMP responsive element binding protein 5
chr6	53365891	53389552	+	53365891	53371540	3pMXE	0.2	50	50	ENSMUST00000204143.3	ENSMUSG00000053007.10	Creb5	chr6	protein_coding	cAMP responsive element binding protein 5
chr6	53365891	53410481	+	53365891	53371540	3pMXE	0.2	50	50	ENSMUST00000204143.3	ENSMUSG00000053007.10	Creb5	chr6	protein_coding	cAMP responsive element binding protein 5
chr6	53264358	53274733	+	53264358	53264833	3pMXE	0.25	50	50	ENSMUST00000204861.3	ENSMUSG00000053007.10	Creb5	chr6	protein_coding	cAMP responsive element binding protein 5
chr6	53264358	53352924	+	53264358	53264833	3pMXE	0.25	50	50	ENSMUST00000204861.3	ENSMUSG00000053007.10	Creb5	chr6	protein_coding	cAMP responsive element binding protein 5
chr6	53264358	53274733	+	53264358	53352924	A3SS	0.25	50	50	ENSMUST00000204245.3	ENSMUSG00000053007.10	Creb5	chr6	protein_coding	cAMP responsive element binding protein 5
chr6	53365891	53410481	+	53365891	53389552	3pMXE	0.2	50	50	ENSMUST00000204136.2	ENSMUSG00000053007.10	Creb5	chr6	protein_coding	cAMP responsive element binding protein 5
chr6	53267800	53346772	+	53342293	53346772	A5SS&ES	0.25	50	50	ENSMUST00000211679.2	ENSMUSG00000053007.10	Creb5	chr6	protein_coding	cAMP responsive element binding protein 5
chr6	53287930	53346772	+	53342293	53346772	A5SS&ES	0.25	50	50	ENSMUST00000211679.2	ENSMUSG00000053007.10	Creb5	chr6	protein_coding	cAMP responsive element binding protein 5
chr6	53287930	53346772	+	53267800	53346772	A5SS	0.25	50	50	ENSMUST00000203487.3	ENSMUSG00000053007.10	Creb5	chr6	protein_coding	cAMP responsive element binding protein 5
chr6	53550423;53558035	53557894;53581447	+	53550423	53581447	cassetteExon	0.5	100	100	ENSMUST00000205120.3	ENSMUSG00000053007.10	Creb5	chr6	protein_coding	cAMP responsive element binding protein 5
chr6	53903893;53909023	53908892;53909397	-	53903893	53909397	cassetteExon	0.5	100	100	ENSMUST00000203101.3	ENSMUSG00000052955.6	Cpvl	chr6	protein_coding	carboxypeptidase, vitellogenic-like
chr6	53951878	53955620	-	53951792	53955620	A3SS	0.5	50	50	ENSMUST00000203101.3	ENSMUSG00000052955.6	Cpvl	chr6	protein_coding	carboxypeptidase, vitellogenic-like
chr6	53955780	53986647	+	53955780;53972897	53972783;53986647	ES	0.5	50	50	ENSMUST00000204478.3	ENSMUSG00000108060.3	4921529L05Rik	chr6	lncRNA	RIKEN cDNA 4921529L05 gene
chr6	53986771;53987071	53986970;53993196	+	53986771	53993196	cassetteExon	0.5	100	100	ENSMUST00000204478.3	ENSMUSG00000108060.3	4921529L05Rik	chr6	lncRNA	RIKEN cDNA 4921529L05 gene
chr6	53955780	53958326	+	53955780	53972783	A3SS	0.33	50	50	ENSMUST00000204478.3	ENSMUSG00000108060.3	4921529L05Rik	chr6	lncRNA	RIKEN cDNA 4921529L05 gene
chr6	53955780	53986647	+	53955780	53958326	3pMXE	0.33	50	50	ENSMUST00000203792.2	ENSMUSG00000108060.3	4921529L05Rik	chr6	lncRNA	RIKEN cDNA 4921529L05 gene
chr6	54017140	54150449	+	54017140	54044714	3pMXE	0.5	50	50	ENSMUST00000138930.2	ENSMUSG00000004633.18	Chn2	chr6	protein_coding	chimerin 2
chr6	54171066	54195509	+	54171066;54192678	54192647;54195509	ES	0.5	50	50	ENSMUST00000046856.14	ENSMUSG00000004633.18	Chn2	chr6	protein_coding	chimerin 2
chr6	54263163	54270023	+	54263163;54267425	54267252;54270023	ES	0.5	50	50	ENSMUST00000046856.14	ENSMUSG00000004633.18	Chn2	chr6	protein_coding	chimerin 2
chr6	54270100	54275030	+	54270100;54272906	54272769;54275030	ES	0.33	50	50	ENSMUST00000046856.14	ENSMUSG00000004633.18	Chn2	chr6	protein_coding	chimerin 2
chr6	54171066	54172693	+	54171066	54192647	A3SS	0.33	50	50	ENSMUST00000046856.14	ENSMUSG00000004633.18	Chn2	chr6	protein_coding	chimerin 2
chr6	54197687	54198906	+	54197687	54250061	A3SS	0.5	50	50	ENSMUST00000046856.14	ENSMUSG00000004633.18	Chn2	chr6	protein_coding	chimerin 2
chr6	54074771	54150449	+	54017140	54150449	A5SS	0.5	50	50	ENSMUST00000046856.14	ENSMUSG00000004633.18	Chn2	chr6	protein_coding	chimerin 2
chr6	54242189	54250061	+	54197687	54250061	A5SS	0.25	50	50	ENSMUST00000046856.14	ENSMUSG00000004633.18	Chn2	chr6	protein_coding	chimerin 2
chr6	54244245	54250061	+	54197687	54250061	A5SS	0.25	50	50	ENSMUST00000046856.14	ENSMUSG00000004633.18	Chn2	chr6	protein_coding	chimerin 2
chr6	54246431	54250061	+	54197687	54250061	A5SS	0.25	50	50	ENSMUST00000046856.14	ENSMUSG00000004633.18	Chn2	chr6	protein_coding	chimerin 2
chr6	54171066	54172693	+	54171066	54195509	A3SS	0.33	50	50	ENSMUST00000133315.4	ENSMUSG00000004633.18	Chn2	chr6	protein_coding	chimerin 2
chr6	54244245	54250061	+	54242189	54250061	A5SS	0.25	50	50	ENSMUST00000146114.8	ENSMUSG00000004633.18	Chn2	chr6	protein_coding	chimerin 2
chr6	54246431	54250061	+	54242189	54250061	A5SS	0.25	50	50	ENSMUST00000146114.8	ENSMUSG00000004633.18	Chn2	chr6	protein_coding	chimerin 2
chr6	54246431	54250061	+	54244245	54250061	A5SS	0.25	50	50	ENSMUST00000114402.9	ENSMUSG00000004633.18	Chn2	chr6	protein_coding	chimerin 2
chr6	54267425	54275030	+	54267425;54270100	54270023;54275030	ES	0.33	50	50	ENSMUST00000204921.3	ENSMUSG00000004633.18	Chn2	chr6	protein_coding	chimerin 2
chr6	54270100	54277058	+	54270100;54275135	54275030;54277058	ES	0.5	50	50	ENSMUST00000204921.3	ENSMUSG00000004633.18	Chn2	chr6	protein_coding	chimerin 2
chr6	54267425;54275135	54275030;54277058	+	54267425;54270100	54270023;54277058	MXE	0.5	100	100	ENSMUST00000203091.3	ENSMUSG00000004633.18	Chn2	chr6	protein_coding	chimerin 2
chr6	54270100	54272769	+	54270100	54277058	A3SS	0.33	50	50	ENSMUST00000203091.3	ENSMUSG00000004633.18	Chn2	chr6	protein_coding	chimerin 2
chr6	54263163;54270100	54270023;54275030	+	54263163;54267425	54267252;54275030	MXE	0.5	100	100	ENSMUST00000204115.3	ENSMUSG00000004633.18	Chn2	chr6	protein_coding	chimerin 2
chr6	54263163;54270100	54270023;54277058	+	54263163;54275135	54267252;54277058	MXE	0.5	100	100	ENSMUST00000204115.3	ENSMUSG00000004633.18	Chn2	chr6	protein_coding	chimerin 2
chr6	54272906	54275030	+	54267425	54275030	A5SS	0.33	50	50	ENSMUST00000204115.3	ENSMUSG00000004633.18	Chn2	chr6	protein_coding	chimerin 2
chr6	54263163;54267425	54267252;54275030	+	54263163;54272906	54270023;54275030	MXE	0.5	100	100	ENSMUST00000204746.2	ENSMUSG00000004633.18	Chn2	chr6	protein_coding	chimerin 2
chr6	54231689	54255852	-	54231689;54246205	54246132;54255852	ES	0.5	50	50	ENSMUST00000138259.8	ENSMUSG00000086946.8	Gm15527	chr6	lncRNA	predicted gene 15527
chr6	54402350	54406306	-	54380720	54406306	A3SS	0.5	50	50	ENSMUST00000145111.8	ENSMUSG00000073067.11	9130019P16Rik	chr6	lncRNA	RIKEN cDNA 9130019P16 gene
chr6	54284404	54304049	-	54284404	54308842	A5SS	0.5	50	50	ENSMUST00000145111.8	ENSMUSG00000073067.11	9130019P16Rik	chr6	lncRNA	RIKEN cDNA 9130019P16 gene
chr6	54465015	54473465	+	54465015;54466094	54465993;54473465	ES	0.5	50	50	ENSMUST00000132855.8	ENSMUSG00000086040.9	Wipf3	chr6	protein_coding	WAS/WASL interacting protein family, member 3
chr6	54449146	54458770	+	54429990	54458770	A5SS	0.5	50	50	ENSMUST00000132855.8	ENSMUSG00000086040.9	Wipf3	chr6	protein_coding	WAS/WASL interacting protein family, member 3
chr6	54465015	54473465	+	54465015	54465993	3pMXE	0.5	50	50	ENSMUST00000131043.2	ENSMUSG00000086040.9	Wipf3	chr6	protein_coding	WAS/WASL interacting protein family, member 3
chr6	54483307	54486188	-	54478399	54486188	A3SS	0.5	50	50	ENSMUST00000205108.2	ENSMUSG00000019124.11	Scrn1	chr6	protein_coding	secernin 1
chr6	54525368	54531104	-	54525368	54543225	A5SS	0.5	50	50	ENSMUST00000019268.11	ENSMUSG00000019124.11	Scrn1	chr6	protein_coding	secernin 1
chr6	54529338	54531104	-	54525368	54531104	A3SS	0.5	50	50	ENSMUST00000129744.2	ENSMUSG00000019124.11	Scrn1	chr6	protein_coding	secernin 1
chr6	54562915	54569832	-	54562915;54566409	54566258;54569832	ES	0.5	50	50	ENSMUST00000046520.13	ENSMUSG00000038074.17	Fkbp14	chr6	protein_coding	FK506 binding protein 14
chr6	54566409	54572450	-	54566409	54569832	5pMXE	0.5	50	50	ENSMUST00000046520.13	ENSMUSG00000038074.17	Fkbp14	chr6	protein_coding	FK506 binding protein 14
chr6	54562915;54564070	54563981;54566258	-	54562915	54566258	cassetteExon	0.5	100	100	ENSMUST00000046520.13	ENSMUSG00000038074.17	Fkbp14	chr6	protein_coding	FK506 binding protein 14
chr6	54559954	54562788	-	54556671	54562788	A3SS	0.5	50	50	ENSMUST00000046520.13	ENSMUSG00000038074.17	Fkbp14	chr6	protein_coding	FK506 binding protein 14
chr6	54572816	54574234	-	54572814	54574234	A3SS	0.5	50	50	ENSMUST00000117375.2	ENSMUSG00000038074.17	Fkbp14	chr6	protein_coding	FK506 binding protein 14
chr6	54562915	54569832	-	54562915	54566258	A5SS&ES	0.33	50	50	ENSMUST00000117375.2	ENSMUSG00000038074.17	Fkbp14	chr6	protein_coding	FK506 binding protein 14
chr6	54562915	54563981	-	54562915	54569832	A5SS	0.33	50	50	ENSMUST00000143312.2	ENSMUSG00000038074.17	Fkbp14	chr6	protein_coding	FK506 binding protein 14
chr6	54580397	54590077	+	54572456	54590077	A5SS	0.5	50	50	ENSMUST00000119706.8	ENSMUSG00000005225.16	Plekha8	chr6	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8
chr6	54794457;54819684	54819660;54840885	+	54794457	54840885	cassetteExon	0.5	100	100	ENSMUST00000079869.13	ENSMUSG00000058446.15	Znrf2	chr6	protein_coding	zinc and ring finger 2
chr6	54914422	54916289	-	54914422;54915206	54915123;54916289	ES	0.5	50	50	ENSMUST00000168172.4	ENSMUSG00000038058.15	Nod1	chr6	protein_coding	nucleotide-binding oligomerization domain containing 1
chr6	54926738	54949254	-	54926738	54948554	5pMXE	0.33	50	50	ENSMUST00000168172.4	ENSMUSG00000038058.15	Nod1	chr6	protein_coding	nucleotide-binding oligomerization domain containing 1
chr6	54901994;54903738	54903508;54905020	-	54901994	54905020	cassetteExon	0.5	100	100	ENSMUST00000168172.4	ENSMUSG00000038058.15	Nod1	chr6	protein_coding	nucleotide-binding oligomerization domain containing 1
chr6	54916372	54916693	-	54916372	54920116	A5SS	0.5	50	50	ENSMUST00000168172.4	ENSMUSG00000038058.15	Nod1	chr6	protein_coding	nucleotide-binding oligomerization domain containing 1
chr6	54926738	54941378	-	54926738	54948554	A5SS	0.33	50	50	ENSMUST00000168172.4	ENSMUSG00000038058.15	Nod1	chr6	protein_coding	nucleotide-binding oligomerization domain containing 1
chr6	54926738	54941378	-	54926738	54949254	A5SS	0.33	50	50	ENSMUST00000060655.15	ENSMUSG00000038058.15	Nod1	chr6	protein_coding	nucleotide-binding oligomerization domain containing 1
chr6	54963953	54969680	-	54963953;54966542	54966397;54969680	ES	0.5	50	50	ENSMUST00000131475.2	ENSMUSG00000002797.10	Ggct	chr6	protein_coding	gamma-glutamyl cyclotransferase
chr6	54963953	54966485	-	54963953	54966397	A5SS	0.33	50	50	ENSMUST00000131475.2	ENSMUSG00000002797.10	Ggct	chr6	protein_coding	gamma-glutamyl cyclotransferase
chr6	54966542	54969555	-	54966542	54969680	A5SS	0.5	50	50	ENSMUST00000131475.2	ENSMUSG00000002797.10	Ggct	chr6	protein_coding	gamma-glutamyl cyclotransferase
chr6	54963945	54966485	-	54963953	54966485	A3SS	0.5	50	50	ENSMUST00000002874.8	ENSMUSG00000002797.10	Ggct	chr6	protein_coding	gamma-glutamyl cyclotransferase
chr6	54963953	54969680	-	54963953	54966485	A5SS&ES	0.33	50	50	ENSMUST00000002874.8	ENSMUSG00000002797.10	Ggct	chr6	protein_coding	gamma-glutamyl cyclotransferase
chr6	54963953	54969680	-	54963953;54966542	54966485;54969680	ES	0.5	50	50	ENSMUST00000204301.3	ENSMUSG00000002797.10	Ggct	chr6	protein_coding	gamma-glutamyl cyclotransferase
chr6	54963953	54969680	-	54966542	54969680	A3SS&ES	0.5	50	50	ENSMUST00000203208.2	ENSMUSG00000002797.10	Ggct	chr6	protein_coding	gamma-glutamyl cyclotransferase
chr6	55079853	55081709	-	55079853;55080259	55080153;55081709	ES	0.33	50	50	ENSMUST00000003568.15	ENSMUSG00000003476.17	Crhr2	chr6	protein_coding	corticotropin releasing hormone receptor 2
chr6	55069118	55069498	-	55068403	55069498	A3SS	0.5	50	50	ENSMUST00000003568.15	ENSMUSG00000003476.17	Crhr2	chr6	protein_coding	corticotropin releasing hormone receptor 2
chr6	55080262	55081709	-	55080259	55081709	A3SS	0.33	50	50	ENSMUST00000003568.15	ENSMUSG00000003476.17	Crhr2	chr6	protein_coding	corticotropin releasing hormone receptor 2
chr6	55094524	55094654	-	55094524	55100668	A5SS	0.5	50	50	ENSMUST00000003568.15	ENSMUSG00000003476.17	Crhr2	chr6	protein_coding	corticotropin releasing hormone receptor 2
chr6	55079853	55081709	-	55079853;55080262	55080153;55081709	ES	0.33	50	50	ENSMUST00000212633.2	ENSMUSG00000003476.17	Crhr2	chr6	protein_coding	corticotropin releasing hormone receptor 2
chr6	55255162	55256070	+	55255095	55256070	A5SS	0.5	50	50	ENSMUST00000053094.8	ENSMUSG00000038022.12	Mindy4	chr6	protein_coding	MINDY lysine 48 deubiquitinase 4
chr6	55361819	55362379	+	55361808	55362379	A5SS	0.5	50	50	ENSMUST00000063578.6	ENSMUSG00000004654.7	Ghrhr	chr6	protein_coding	growth hormone releasing hormone receptor
chr6	55382354	55382527	+	55373958	55382527	A5SS	0.5	50	50	ENSMUST00000204412.2	ENSMUSG00000108228.3	6430584L05Rik	chr6	lncRNA	RIKEN cDNA 6430584L05 gene
chr6	55462018	55471062	+	55462018;55468295	55468212;55471062	ES	0.33	50	50	ENSMUST00000070736.12	ENSMUSG00000029778.13	Adcyap1r1	chr6	protein_coding	adenylate cyclase activating polypeptide 1 receptor 1
chr6	55462018;55464727	55464644;55468212	+	55462018	55468212	cassetteExon	0.5	100	100	ENSMUST00000070736.12	ENSMUSG00000029778.13	Adcyap1r1	chr6	protein_coding	adenylate cyclase activating polypeptide 1 receptor 1
chr6	55462018;55464727	55464644;55471062	+	55462018;55468295	55468212;55471062	MXE	0.5	100	100	ENSMUST00000070736.12	ENSMUSG00000029778.13	Adcyap1r1	chr6	protein_coding	adenylate cyclase activating polypeptide 1 receptor 1
chr6	55452493	55455050	+	55452493	55455067	A3SS	0.5	50	50	ENSMUST00000070736.12	ENSMUSG00000029778.13	Adcyap1r1	chr6	protein_coding	adenylate cyclase activating polypeptide 1 receptor 1
chr6	55462018	55468215	+	55462018	55468212	A3SS	0.25	50	50	ENSMUST00000070736.12	ENSMUSG00000029778.13	Adcyap1r1	chr6	protein_coding	adenylate cyclase activating polypeptide 1 receptor 1
chr6	55429612	55437142	+	55429353	55437142	A5SS	0.5	50	50	ENSMUST00000070736.12	ENSMUSG00000029778.13	Adcyap1r1	chr6	protein_coding	adenylate cyclase activating polypeptide 1 receptor 1
chr6	55462018;55464727	55464644;55471062	+	55462018	55471062	cassetteExon	0.5	100	100	ENSMUST00000070756.12	ENSMUSG00000029778.13	Adcyap1r1	chr6	protein_coding	adenylate cyclase activating polypeptide 1 receptor 1
chr6	55462018;55468295	55468215;55471062	+	55462018	55471062	cassetteExon	0.5	100	100	ENSMUST00000070756.12	ENSMUSG00000029778.13	Adcyap1r1	chr6	protein_coding	adenylate cyclase activating polypeptide 1 receptor 1
chr6	55449312	55455067	+	55449312	55451545	A3SS&ES	0.5	50	50	ENSMUST00000166962.8	ENSMUSG00000029778.13	Adcyap1r1	chr6	protein_coding	adenylate cyclase activating polypeptide 1 receptor 1
chr6	55452493	55455067	+	55449312	55455067	A5SS	0.5	50	50	ENSMUST00000172084.8	ENSMUSG00000029778.13	Adcyap1r1	chr6	protein_coding	adenylate cyclase activating polypeptide 1 receptor 1
chr6	55462018;55468295	55468215;55471062	+	55462018;55464727	55464644;55471062	MXE	0.5	100	100	ENSMUST00000165857.8	ENSMUSG00000029778.13	Adcyap1r1	chr6	protein_coding	adenylate cyclase activating polypeptide 1 receptor 1
chr6	55464727;55468295	55468212;55471062	+	55464727	55471062	cassetteExon	0.5	100	100	ENSMUST00000165857.8	ENSMUSG00000029778.13	Adcyap1r1	chr6	protein_coding	adenylate cyclase activating polypeptide 1 receptor 1
chr6	55462018	55468215	+	55462018	55464644	A3SS&ES	0.25	50	50	ENSMUST00000167234.8	ENSMUSG00000029778.13	Adcyap1r1	chr6	protein_coding	adenylate cyclase activating polypeptide 1 receptor 1
chr6	55863854	55863984	+	55861732	55863984	A5SS	0.5	50	50	ENSMUST00000044729.7	ENSMUSG00000037973.7	Itprid1	chr6	protein_coding	ITPR interacting domain containing 1
chr6	56158782	56338730	-	56158782;56322137	56322111;56338730	ES	0.5	50	50	ENSMUST00000044505.14	ENSMUSG00000004347.18	Pde1c	chr6	protein_coding	phosphodiesterase 1C
chr6	56322137	56346526	-	56322137	56338730	5pMXE	0.5	50	50	ENSMUST00000044505.14	ENSMUSG00000004347.18	Pde1c	chr6	protein_coding	phosphodiesterase 1C
chr6	56049360;56059173	56059114;56068348	-	56049360	56068348	cassetteExon	0.5	100	100	ENSMUST00000044505.14	ENSMUSG00000004347.18	Pde1c	chr6	protein_coding	phosphodiesterase 1C
chr6	56049360;56059560	56059114;56068348	-	56049360	56068348	cassetteExon	0.5	100	100	ENSMUST00000044505.14	ENSMUSG00000004347.18	Pde1c	chr6	protein_coding	phosphodiesterase 1C
chr6	56083848	56099977	-	56068416	56099977	A3SS	0.5	50	50	ENSMUST00000044505.14	ENSMUSG00000004347.18	Pde1c	chr6	protein_coding	phosphodiesterase 1C
chr6	56456173	56558179	-	56456173	56545663	5pMXE	0.5	50	50	ENSMUST00000203372.3	ENSMUSG00000004347.18	Pde1c	chr6	protein_coding	phosphodiesterase 1C
chr6	56158782	56322111	-	56158782	56418971	A5SS	0.25	50	50	ENSMUST00000203372.3	ENSMUSG00000004347.18	Pde1c	chr6	protein_coding	phosphodiesterase 1C
chr6	56158782	56338730	-	56158782	56418971	A5SS	0.25	50	50	ENSMUST00000203372.3	ENSMUSG00000004347.18	Pde1c	chr6	protein_coding	phosphodiesterase 1C
chr6	56158782	56346526	-	56158782	56418971	A5SS	0.25	50	50	ENSMUST00000203372.3	ENSMUSG00000004347.18	Pde1c	chr6	protein_coding	phosphodiesterase 1C
chr6	56059173;56059560	56059356;56068348	-	56059173	56068348	cassetteExon	0.5	100	100	ENSMUST00000203967.3	ENSMUSG00000004347.18	Pde1c	chr6	protein_coding	phosphodiesterase 1C
chr6	56049360	56068348	-	56059173	56068348	3pMXE	0.33	50	50	ENSMUST00000114327.9	ENSMUSG00000004347.18	Pde1c	chr6	protein_coding	phosphodiesterase 1C
chr6	56339178	56339723	-	56339178	56339329	5pMXE	0.5	50	50	ENSMUST00000114327.9	ENSMUSG00000004347.18	Pde1c	chr6	protein_coding	phosphodiesterase 1C
chr6	56158782;56322137	56322111;56346526	-	56158782	56346526	cassetteExon	0.5	100	100	ENSMUST00000170774.8	ENSMUSG00000004347.18	Pde1c	chr6	protein_coding	phosphodiesterase 1C
chr6	56158782;56338845	56338730;56346526	-	56158782	56346526	cassetteExon	0.5	100	100	ENSMUST00000170774.8	ENSMUSG00000004347.18	Pde1c	chr6	protein_coding	phosphodiesterase 1C
chr6	56322137	56346526	-	56322137;56338845	56338730;56346526	ES	0.33	50	50	ENSMUST00000168944.8	ENSMUSG00000004347.18	Pde1c	chr6	protein_coding	phosphodiesterase 1C
chr6	56158782;56338845	56338730;56346526	-	56158782;56322137	56322111;56346526	MXE	0.5	100	100	ENSMUST00000166890.8	ENSMUSG00000004347.18	Pde1c	chr6	protein_coding	phosphodiesterase 1C
chr6	56158782	56346526	-	56158782	56338730	5pMXE	0.25	50	50	ENSMUST00000164037.3	ENSMUSG00000004347.18	Pde1c	chr6	protein_coding	phosphodiesterase 1C
chr6	56158782	56338730	-	56322137	56338730	3pMXE	0.5	50	50	ENSMUST00000203492.2	ENSMUSG00000004347.18	Pde1c	chr6	protein_coding	phosphodiesterase 1C
chr6	56679153	56680299	-	56679153;56680018	56679991;56680299	ES	0.5	50	50	ENSMUST00000170382.5	ENSMUSG00000091625.9	Lsm5	chr6	protein_coding	LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
chr6	56680018	56681608	-	56680018;56680394	56680299;56681608	ES	0.5	50	50	ENSMUST00000170382.5	ENSMUSG00000091625.9	Lsm5	chr6	protein_coding	LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
chr6	56679153	56680303	-	56679153	56679991	A5SS&ES	0.33	50	50	ENSMUST00000170382.5	ENSMUSG00000091625.9	Lsm5	chr6	protein_coding	LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
chr6	56679153;56680394	56680299;56681608	-	56679153;56680018	56679991;56681608	MXE	0.5	100	100	ENSMUST00000203958.2	ENSMUSG00000091625.9	Lsm5	chr6	protein_coding	LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
chr6	56679153;56680394	56680303;56681608	-	56679153;56680018	56679991;56681608	MXE	0.5	100	100	ENSMUST00000203958.2	ENSMUSG00000091625.9	Lsm5	chr6	protein_coding	LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
chr6	56680018	56681608	-	56680394	56681608	A3SS	0.5	50	50	ENSMUST00000175865.6	ENSMUSG00000091625.9	Lsm5	chr6	protein_coding	LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
chr6	56679153	56680299	-	56679153	56679991	A5SS	0.33	50	50	ENSMUST00000175865.6	ENSMUSG00000091625.9	Lsm5	chr6	protein_coding	LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
chr6	56679153	56680299	-	56679153	56680303	A5SS	0.33	50	50	ENSMUST00000177144.2	ENSMUSG00000091625.9	Lsm5	chr6	protein_coding	LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
chr6	56692199	56700492	+	56692199	56700461	A3SS	0.5	50	50	ENSMUST00000031805.11	ENSMUSG00000029787.11	Avl9	chr6	protein_coding	AVL9 cell migration associated
chr6	56707696	56712348	+	56707665	56712348	A5SS	0.5	50	50	ENSMUST00000031805.11	ENSMUSG00000029787.11	Avl9	chr6	protein_coding	AVL9 cell migration associated
chr6	56766685	56773660	-	56766685	56774444	A5SS	0.25	50	50	ENSMUST00000114323.8	ENSMUSG00000059486.12	Kbtbd2	chr6	protein_coding	kelch repeat and BTB (POZ) domain containing 2
chr6	56766685	56774148	-	56766685	56774444	A5SS	0.25	50	50	ENSMUST00000114323.8	ENSMUSG00000059486.12	Kbtbd2	chr6	protein_coding	kelch repeat and BTB (POZ) domain containing 2
chr6	56766685	56774468	-	56766685	56774444	A5SS	0.25	50	50	ENSMUST00000114323.8	ENSMUSG00000059486.12	Kbtbd2	chr6	protein_coding	kelch repeat and BTB (POZ) domain containing 2
chr6	56766685	56773660	-	56766685	56774468	A5SS	0.25	50	50	ENSMUST00000114321.2	ENSMUSG00000059486.12	Kbtbd2	chr6	protein_coding	kelch repeat and BTB (POZ) domain containing 2
chr6	56766685	56774148	-	56766685	56774468	A5SS	0.25	50	50	ENSMUST00000114321.2	ENSMUSG00000059486.12	Kbtbd2	chr6	protein_coding	kelch repeat and BTB (POZ) domain containing 2
chr6	56766685	56773660	-	56766685	56774148	A5SS	0.25	50	50	ENSMUST00000151308.2	ENSMUSG00000059486.12	Kbtbd2	chr6	protein_coding	kelch repeat and BTB (POZ) domain containing 2
chr6	56874814	56890791	-	56874814	56878823	5pMXE	0.33	50	50	ENSMUST00000101367.9	ENSMUSG00000029780.15	Nt5c3	chr6	protein_coding	5'-nucleotidase, cytosolic III
chr6	56874814	56900657	-	56874814	56878823	5pMXE	0.33	50	50	ENSMUST00000101367.9	ENSMUSG00000029780.15	Nt5c3	chr6	protein_coding	5'-nucleotidase, cytosolic III
chr6	56868546	56900657	-	56868546;56869873	56869775;56900657	ES	0.2	50	50	ENSMUST00000031793.8	ENSMUSG00000029780.15	Nt5c3	chr6	protein_coding	5'-nucleotidase, cytosolic III
chr6	56869873;56874814	56874760;56900657	-	56869873	56900657	cassetteExon	0.5	100	100	ENSMUST00000031793.8	ENSMUSG00000029780.15	Nt5c3	chr6	protein_coding	5'-nucleotidase, cytosolic III
chr6	56869873;56890879	56890791;56900657	-	56869873	56900657	cassetteExon	0.5	100	100	ENSMUST00000031793.8	ENSMUSG00000029780.15	Nt5c3	chr6	protein_coding	5'-nucleotidase, cytosolic III
chr6	56869873;56900097	56900052;56900657	-	56869873	56900657	cassetteExon	0.5	100	100	ENSMUST00000031793.8	ENSMUSG00000029780.15	Nt5c3	chr6	protein_coding	5'-nucleotidase, cytosolic III
chr6	56869873;56890879	56890791;56900657	-	56869873;56874814	56874760;56900657	MXE	0.5	100	100	ENSMUST00000152447.9	ENSMUSG00000029780.15	Nt5c3	chr6	protein_coding	5'-nucleotidase, cytosolic III
chr6	56874814;56890879	56890791;56900657	-	56874814	56900657	cassetteExon	0.5	100	100	ENSMUST00000152447.9	ENSMUSG00000029780.15	Nt5c3	chr6	protein_coding	5'-nucleotidase, cytosolic III
chr6	56869873;56900097	56900052;56900657	-	56869873;56874814	56874760;56900657	MXE	0.5	100	100	ENSMUST00000152447.9	ENSMUSG00000029780.15	Nt5c3	chr6	protein_coding	5'-nucleotidase, cytosolic III
chr6	56869873;56874814	56874760;56890791	-	56869873	56890791	cassetteExon	0.5	100	100	ENSMUST00000135558.8	ENSMUSG00000029780.15	Nt5c3	chr6	protein_coding	5'-nucleotidase, cytosolic III
chr6	56869873;56900097	56900052;56900657	-	56869873;56890879	56890791;56900657	MXE	0.5	100	100	ENSMUST00000135558.8	ENSMUSG00000029780.15	Nt5c3	chr6	protein_coding	5'-nucleotidase, cytosolic III
chr6	56874814	56900657	-	56868546	56900657	A3SS	0.2	50	50	ENSMUST00000205087.2	ENSMUSG00000029780.15	Nt5c3	chr6	protein_coding	5'-nucleotidase, cytosolic III
chr6	56890879	56900657	-	56868546	56900657	A3SS	0.2	50	50	ENSMUST00000205087.2	ENSMUSG00000029780.15	Nt5c3	chr6	protein_coding	5'-nucleotidase, cytosolic III
chr6	56900097	56900657	-	56868546	56900657	A3SS	0.2	50	50	ENSMUST00000205087.2	ENSMUSG00000029780.15	Nt5c3	chr6	protein_coding	5'-nucleotidase, cytosolic III
chr6	56869873;56900097	56900052;56900657	-	56869873;56890879	56874760;56900657	MXE	0.5	100	100	ENSMUST00000134577.2	ENSMUSG00000029780.15	Nt5c3	chr6	protein_coding	5'-nucleotidase, cytosolic III
chr6	56926371	56933446	+	56905000	56933446	A5SS	0.5	50	50	ENSMUST00000176838.2	ENSMUSG00000071893.8	Vmn1r4	chr6	protein_coding	vomeronasal 1 receptor 4
chr6	56947344	56962275	+	56947344;56960691	56960487;56962275	ES	0.5	50	50	ENSMUST00000226130.2	ENSMUSG00000090346.3	Vmn1r5	chr6	protein_coding	vomeronasal 1 receptor 5
chr6	56976250;56979071	56978949;56979289	+	56976250	56979289	cassetteExon	0.5	100	100	ENSMUST00000228285.2	ENSMUSG00000115701.2	Vmn1r6	chr6	protein_coding	vomeronasal 1 receptor 6
chr6	56976250	56979434	+	56976250	56979289	A3SS	0.33	50	50	ENSMUST00000228285.2	ENSMUSG00000115701.2	Vmn1r6	chr6	protein_coding	vomeronasal 1 receptor 6
chr6	56976250	56979434	+	56976250	56978949	A3SS&ES	0.33	50	50	ENSMUST00000227847.2	ENSMUSG00000115701.2	Vmn1r6	chr6	protein_coding	vomeronasal 1 receptor 6
chr6	57009353	57012731	+	57009353	57012899	A3SS	0.5	50	50	ENSMUST00000227706.2	ENSMUSG00000061208.7	Vmn1r8	chr6	protein_coding	vomeronasal 1 receptor 8
chr6	57110644	57114432	+	57110644	57114286	A3SS	0.5	50	50	ENSMUST00000226968.2	ENSMUSG00000115236.2	Vmn1r11	chr6	protein_coding	vomeronasal 1 receptor 11
chr6	57134099	57136020	+	57134099	57135872	A3SS	0.5	50	50	ENSMUST00000226866.2	ENSMUSG00000057981.6	Vmn1r12	chr6	protein_coding	vomeronasal 1 receptor 12
chr6	57180307;57180864	57180786;57186200	+	57180307	57186200	cassetteExon	0.5	100	100	ENSMUST00000226892.2	ENSMUSG00000064259.3	Vmn1r13	chr6	protein_coding	vomeronasal 1 receptor 13
chr6	57183576	57186200	+	57180307	57186200	A5SS	0.33	50	50	ENSMUST00000226892.2	ENSMUSG00000064259.3	Vmn1r13	chr6	protein_coding	vomeronasal 1 receptor 13
chr6	57183576	57186200	+	57180864	57186200	A5SS	0.33	50	50	ENSMUST00000227421.2	ENSMUSG00000064259.3	Vmn1r13	chr6	protein_coding	vomeronasal 1 receptor 13
chr6	57208732	57210539	+	57208732	57210391	A3SS	0.5	50	50	ENSMUST00000227884.2	ENSMUSG00000114982.2	Vmn1r14	chr6	protein_coding	vomeronasal 1 receptor 14
chr6	57338415	57340669	-	57338269	57340669	A3SS	0.5	50	50	ENSMUST00000228156.2	ENSMUSG00000115644.2	Vmn1r17	chr6	protein_coding	vomeronasal 1 receptor 17
chr6	57338269	57340673	-	57338269	57340669	A5SS	0.5	50	50	ENSMUST00000228156.2	ENSMUSG00000115644.2	Vmn1r17	chr6	protein_coding	vomeronasal 1 receptor 17
chr6	57338415	57340673	-	57338415	57340669	A5SS	0.5	50	50	ENSMUST00000227186.2	ENSMUSG00000115644.2	Vmn1r17	chr6	protein_coding	vomeronasal 1 receptor 17
chr6	57338415	57340673	-	57338269	57340673	A3SS	0.5	50	50	ENSMUST00000228294.2	ENSMUSG00000115644.2	Vmn1r17	chr6	protein_coding	vomeronasal 1 receptor 17
chr6	57581185;57584163	57584027;57584619	+	57581185	57584619	cassetteExon	0.5	100	100	ENSMUST00000204686.2	ENSMUSG00000108112.2	Gm45193	chr6	lncRNA	predicted gene 45193
chr6	57595691	57596430	+	57595691	57596521	A3SS	0.5	50	50	ENSMUST00000204686.2	ENSMUSG00000108112.2	Gm45193	chr6	lncRNA	predicted gene 45193
chr6	57558217	57560158	+	57472644	57560158	A5SS	0.33	50	50	ENSMUST00000204686.2	ENSMUSG00000108112.2	Gm45193	chr6	lncRNA	predicted gene 45193
chr6	57558240	57560158	+	57472644	57560158	A5SS	0.33	50	50	ENSMUST00000204686.2	ENSMUSG00000108112.2	Gm45193	chr6	lncRNA	predicted gene 45193
chr6	57511494	57512265	-	57502239	57512265	A3SS	0.5	50	50	ENSMUST00000042766.6	ENSMUSG00000037826.6	Ppm1k	chr6	protein_coding	protein phosphatase 1K (PP2C domain containing)
chr6	57558240	57560158	+	57558217	57560158	A5SS	0.33	50	50	ENSMUST00000031817.10	ENSMUSG00000029798.12	Herc6	chr6	protein_coding	hect domain and RLD 6
chr6	57751773	57801912	-	57751773;57767020	57766962;57801912	ES	0.33	50	50	ENSMUST00000127485.8	ENSMUSG00000037788.15	Vopp1	chr6	protein_coding	vesicular, overexpressed in cancer, prosurvival protein 1
chr6	57767020;57785677	57785521;57801912	-	57767020	57801912	cassetteExon	0.5	100	100	ENSMUST00000127485.8	ENSMUSG00000037788.15	Vopp1	chr6	protein_coding	vesicular, overexpressed in cancer, prosurvival protein 1
chr6	57731661	57739420	-	57707215	57739420	A3SS	0.5	50	50	ENSMUST00000127485.8	ENSMUSG00000037788.15	Vopp1	chr6	protein_coding	vesicular, overexpressed in cancer, prosurvival protein 1
chr6	57767020	57801393	-	57767020	57801912	A5SS	0.33	50	50	ENSMUST00000127485.8	ENSMUSG00000037788.15	Vopp1	chr6	protein_coding	vesicular, overexpressed in cancer, prosurvival protein 1
chr6	57767020	57801393	-	57767020	57785521	A5SS&ES	0.33	50	50	ENSMUST00000204878.3	ENSMUSG00000037788.15	Vopp1	chr6	protein_coding	vesicular, overexpressed in cancer, prosurvival protein 1
chr6	57785677	57801912	-	57751773	57801912	A3SS	0.33	50	50	ENSMUST00000203212.3	ENSMUSG00000037788.15	Vopp1	chr6	protein_coding	vesicular, overexpressed in cancer, prosurvival protein 1
chr6	57821469	57827311	-	57821469;57822940	57822835;57827311	ES	0.5	50	50	ENSMUST00000203310.3	ENSMUSG00000115343.2	Vmn1r21	chr6	protein_coding	vomeronasal 1 receptor 21
chr6	57878027;57882496	57882429;57884920	-	57878027	57884920	cassetteExon	0.5	100	100	ENSMUST00000228076.2	ENSMUSG00000115091.2	Vmn1r22	chr6	protein_coding	vomeronasal 1 receptor 22
chr6	57877410	57884920	-	57878027	57884920	A3SS	0.25	50	50	ENSMUST00000228076.2	ENSMUSG00000115091.2	Vmn1r22	chr6	protein_coding	vomeronasal 1 receptor 22
chr6	57883091	57884920	-	57878027	57884920	A3SS	0.25	50	50	ENSMUST00000228076.2	ENSMUSG00000115091.2	Vmn1r22	chr6	protein_coding	vomeronasal 1 receptor 22
chr6	57877410;57882496	57882429;57884920	-	57877410	57884920	cassetteExon	0.5	100	100	ENSMUST00000228905.2	ENSMUSG00000115091.2	Vmn1r22	chr6	protein_coding	vomeronasal 1 receptor 22
chr6	57883091	57884920	-	57877410	57884920	A3SS	0.25	50	50	ENSMUST00000228905.2	ENSMUSG00000115091.2	Vmn1r22	chr6	protein_coding	vomeronasal 1 receptor 22
chr6	57878027	57884920	-	57878027;57883091	57882429;57884920	ES	0.25	50	50	ENSMUST00000227650.2	ENSMUSG00000115091.2	Vmn1r22	chr6	protein_coding	vomeronasal 1 receptor 22
chr6	57877410	57882429	-	57878027	57882429	A3SS	0.5	50	50	ENSMUST00000227650.2	ENSMUSG00000115091.2	Vmn1r22	chr6	protein_coding	vomeronasal 1 receptor 22
chr6	57882496	57884920	-	57883091	57884920	A3SS	0.25	50	50	ENSMUST00000227650.2	ENSMUSG00000115091.2	Vmn1r22	chr6	protein_coding	vomeronasal 1 receptor 22
chr6	57877410	57884920	-	57877410;57883091	57882429;57884920	ES	0.25	50	50	ENSMUST00000227342.2	ENSMUSG00000115091.2	Vmn1r22	chr6	protein_coding	vomeronasal 1 receptor 22
chr6	57877410	57884920	-	57882496	57884920	A3SS&ES	0.25	50	50	ENSMUST00000228257.2	ENSMUSG00000115091.2	Vmn1r22	chr6	protein_coding	vomeronasal 1 receptor 22
chr6	57986238	57988931	-	57986238;57987754	57987628;57988931	ES	0.5	50	50	ENSMUST00000228951.2	ENSMUSG00000048697.5	Vmn1r26	chr6	protein_coding	vomeronasal 1 receptor 26
chr6	57989020	57992136	-	57989020	57991163	5pMXE	0.5	50	50	ENSMUST00000228951.2	ENSMUSG00000048697.5	Vmn1r26	chr6	protein_coding	vomeronasal 1 receptor 26
chr6	58192908	58195671	-	58193054	58195671	A3SS	0.5	50	50	ENSMUST00000228530.2	ENSMUSG00000071428.3	Vmn1r27	chr6	protein_coding	vomeronasal 1 receptor 27
chr6	58241333	58241407	+	58239304	58241407	A5SS	0.5	50	50	ENSMUST00000227805.2	ENSMUSG00000115705.2	Vmn1r28	chr6	protein_coding	vomeronasal 1 receptor 28
chr6	58278612	58284230	+	58278612;58282627	58282490;58284230	ES	0.5	50	50	ENSMUST00000228909.2	ENSMUSG00000091734.3	Vmn1r29	chr6	protein_coding	vomeronasal 1 receptor 29
chr6	58278612;58280870	58280815;58282490	+	58278612	58282490	cassetteExon	0.5	100	100	ENSMUST00000228909.2	ENSMUSG00000091734.3	Vmn1r29	chr6	protein_coding	vomeronasal 1 receptor 29
chr6	58278612	58282477	+	58278612	58282490	A3SS	0.25	50	50	ENSMUST00000228909.2	ENSMUSG00000091734.3	Vmn1r29	chr6	protein_coding	vomeronasal 1 receptor 29
chr6	58278612	58284230	+	58278612;58282627	58282477;58284230	ES	0.5	50	50	ENSMUST00000227761.2	ENSMUSG00000091734.3	Vmn1r29	chr6	protein_coding	vomeronasal 1 receptor 29
chr6	58278612	58280815	+	58278612	58282477	A3SS	0.25	50	50	ENSMUST00000227761.2	ENSMUSG00000091734.3	Vmn1r29	chr6	protein_coding	vomeronasal 1 receptor 29
chr6	58278612	58280815	+	58278612	58284230	A3SS	0.25	50	50	ENSMUST00000228038.2	ENSMUSG00000091734.3	Vmn1r29	chr6	protein_coding	vomeronasal 1 receptor 29
chr6	58412882	58418245	-	58412882;58417001	58416832;58418245	ES	0.5	50	50	ENSMUST00000228577.2	ENSMUSG00000095670.3	Vmn1r30	chr6	protein_coding	vomeronasal 1 receptor 30
chr6	58417001	58420334	-	58417001	58418245	5pMXE	0.5	50	50	ENSMUST00000228577.2	ENSMUSG00000095670.3	Vmn1r30	chr6	protein_coding	vomeronasal 1 receptor 30
chr6	58412882	58420334	-	58412882	58418245	5pMXE	0.33	50	50	ENSMUST00000227466.2	ENSMUSG00000095670.3	Vmn1r30	chr6	protein_coding	vomeronasal 1 receptor 30
chr6	58412882	58420334	-	58412882;58417001	58416832;58420334	ES	0.5	50	50	ENSMUST00000226334.2	ENSMUSG00000095670.3	Vmn1r30	chr6	protein_coding	vomeronasal 1 receptor 30
chr6	58412882	58418245	-	58412882	58416832	A5SS&ES	0.33	50	50	ENSMUST00000226334.2	ENSMUSG00000095670.3	Vmn1r30	chr6	protein_coding	vomeronasal 1 receptor 30
chr6	58449769	58452230	-	58449915	58452230	A3SS	0.5	50	50	ENSMUST00000177318.3	ENSMUSG00000115404.2	Vmn1r31	chr6	protein_coding	vomeronasal 1 receptor 31
chr6	58449915	58452191	-	58449915	58452230	A5SS	0.5	50	50	ENSMUST00000177318.3	ENSMUSG00000115404.2	Vmn1r31	chr6	protein_coding	vomeronasal 1 receptor 31
chr6	58449915	58452191	-	58449769	58452191	A3SS	0.5	50	50	ENSMUST00000176147.9	ENSMUSG00000115404.2	Vmn1r31	chr6	protein_coding	vomeronasal 1 receptor 31
chr6	58449769	58452230	-	58449769	58452191	A5SS	0.5	50	50	ENSMUST00000176147.9	ENSMUSG00000115404.2	Vmn1r31	chr6	protein_coding	vomeronasal 1 receptor 31
chr6	58562045	58562734	+	58562045	58632623	A3SS	0.5	50	50	ENSMUST00000147213.8	ENSMUSG00000029802.14	Abcg2	chr6	protein_coding	ATP binding cassette subfamily G member 2 (Junior blood group)
chr6	58561557	58561961	+	58561520	58561961	A5SS	0.5	50	50	ENSMUST00000147213.8	ENSMUSG00000029802.14	Abcg2	chr6	protein_coding	ATP binding cassette subfamily G member 2 (Junior blood group)
chr6	58574093	58632623	+	58562045	58632623	A5SS	0.25	50	50	ENSMUST00000147213.8	ENSMUSG00000029802.14	Abcg2	chr6	protein_coding	ATP binding cassette subfamily G member 2 (Junior blood group)
chr6	58617612	58632623	+	58562045	58632623	A5SS	0.25	50	50	ENSMUST00000147213.8	ENSMUSG00000029802.14	Abcg2	chr6	protein_coding	ATP binding cassette subfamily G member 2 (Junior blood group)
chr6	58627528	58632623	+	58562045	58632623	A5SS	0.25	50	50	ENSMUST00000147213.8	ENSMUSG00000029802.14	Abcg2	chr6	protein_coding	ATP binding cassette subfamily G member 2 (Junior blood group)
chr6	58617612	58632623	+	58574093	58632623	A5SS	0.33	50	50	ENSMUST00000148008.2	ENSMUSG00000029802.14	Abcg2	chr6	protein_coding	ATP binding cassette subfamily G member 2 (Junior blood group)
chr6	58627528	58632623	+	58574093	58632623	A5SS	0.33	50	50	ENSMUST00000148008.2	ENSMUSG00000029802.14	Abcg2	chr6	protein_coding	ATP binding cassette subfamily G member 2 (Junior blood group)
chr6	58662806	58666524	+	58662806	58666540	A3SS	0.5	50	50	ENSMUST00000031822.13	ENSMUSG00000029802.14	Abcg2	chr6	protein_coding	ATP binding cassette subfamily G member 2 (Junior blood group)
chr6	58660258	58667516	+	58666629	58667516	A5SS&ES	0.5	50	50	ENSMUST00000031822.13	ENSMUSG00000029802.14	Abcg2	chr6	protein_coding	ATP binding cassette subfamily G member 2 (Junior blood group)
chr6	58617612;58627528	58627446;58632623	+	58617612	58632623	cassetteExon	0.5	100	100	ENSMUST00000124542.2	ENSMUSG00000029802.14	Abcg2	chr6	protein_coding	ATP binding cassette subfamily G member 2 (Junior blood group)
chr6	58641543	58666540	+	58641543	58642089	3pMXE	0.5	50	50	ENSMUST00000145161.8	ENSMUSG00000029802.14	Abcg2	chr6	protein_coding	ATP binding cassette subfamily G member 2 (Junior blood group)
chr6	58662806	58666540	+	58641543	58666540	A5SS	0.5	50	50	ENSMUST00000203146.3	ENSMUSG00000029802.14	Abcg2	chr6	protein_coding	ATP binding cassette subfamily G member 2 (Junior blood group)
chr6	58808627	58820589	+	58808627;58809521	58809387;58820589	ES	0.25	50	50	ENSMUST00000141600.8	ENSMUSG00000029804.18	Herc3	chr6	protein_coding	hect domain and RLD 3
chr6	58808917	58809387	+	58808627	58809387	A5SS	0.5	50	50	ENSMUST00000141600.8	ENSMUSG00000029804.18	Herc3	chr6	protein_coding	hect domain and RLD 3
chr6	58808917	58820589	+	58809521	58820589	A5SS&ES	0.25	50	50	ENSMUST00000141600.8	ENSMUSG00000029804.18	Herc3	chr6	protein_coding	hect domain and RLD 3
chr6	58810756	58820589	+	58809521	58820589	A5SS	0.25	50	50	ENSMUST00000141600.8	ENSMUSG00000029804.18	Herc3	chr6	protein_coding	hect domain and RLD 3
chr6	58808917	58820589	+	58808917;58809521	58809387;58820589	ES	0.25	50	50	ENSMUST00000122981.2	ENSMUSG00000029804.18	Herc3	chr6	protein_coding	hect domain and RLD 3
chr6	58808627	58820589	+	58809521	58820589	A5SS&ES	0.25	50	50	ENSMUST00000122981.2	ENSMUSG00000029804.18	Herc3	chr6	protein_coding	hect domain and RLD 3
chr6	58808917	58820589	+	58808627	58820589	A5SS	0.25	50	50	ENSMUST00000203714.4	ENSMUSG00000029804.18	Herc3	chr6	protein_coding	hect domain and RLD 3
chr6	58810756	58820589	+	58808627	58820589	A5SS	0.25	50	50	ENSMUST00000203714.4	ENSMUSG00000029804.18	Herc3	chr6	protein_coding	hect domain and RLD 3
chr6	58810756	58820589	+	58808917	58820589	A5SS	0.25	50	50	ENSMUST00000126292.8	ENSMUSG00000029804.18	Herc3	chr6	protein_coding	hect domain and RLD 3
chr6	58871609	58893397	+	58871609	58880229	3pMXE	0.33	50	50	ENSMUST00000031823.12	ENSMUSG00000029804.18	Herc3	chr6	protein_coding	hect domain and RLD 3
chr6	58851385	58851852	+	58851385	58853474	A3SS	0.5	50	50	ENSMUST00000031823.12	ENSMUSG00000029804.18	Herc3	chr6	protein_coding	hect domain and RLD 3
chr6	58871609	58879105	+	58871609	58880229	A3SS	0.33	50	50	ENSMUST00000031823.12	ENSMUSG00000029804.18	Herc3	chr6	protein_coding	hect domain and RLD 3
chr6	58849059	58850719	+	58847198	58850719	A5SS	0.5	50	50	ENSMUST00000031823.12	ENSMUSG00000029804.18	Herc3	chr6	protein_coding	hect domain and RLD 3
chr6	58871609	58879105	+	58871609	58893397	A3SS	0.33	50	50	ENSMUST00000041401.11	ENSMUSG00000029804.18	Herc3	chr6	protein_coding	hect domain and RLD 3
chr6	58884656	58893397	+	58871609	58893397	A5SS	0.5	50	50	ENSMUST00000041401.11	ENSMUSG00000029804.18	Herc3	chr6	protein_coding	hect domain and RLD 3
chr6	58917302	58923025	-	58917302;58921189	58921106;58923025	ES	0.5	50	50	ENSMUST00000089860.12	ENSMUSG00000037709.14	Fam13a	chr6	protein_coding	family with sequence similarity 13, member A
chr6	58980491;58991606	58991416;59001297	-	58980491	59001297	cassetteExon	0.5	100	100	ENSMUST00000089860.12	ENSMUSG00000037709.14	Fam13a	chr6	protein_coding	family with sequence similarity 13, member A
chr6	60378671	60380533	-	60257315	60380533	A3SS	0.33	50	50	ENSMUST00000205153.2	ENSMUSG00000046764.9	A530053G22Rik	chr6	lncRNA	RIKEN cDNA A530053G22 gene
chr6	60379162	60380533	-	60257315	60380533	A3SS	0.33	50	50	ENSMUST00000205153.2	ENSMUSG00000046764.9	A530053G22Rik	chr6	lncRNA	RIKEN cDNA A530053G22 gene
chr6	60374645	60379023	-	60374645;60378671	60378601;60379023	ES	0.5	50	50	ENSMUST00000060147.7	ENSMUSG00000046764.9	A530053G22Rik	chr6	lncRNA	RIKEN cDNA A530053G22 gene
chr6	60378671	60380533	-	60378671;60379162	60379023;60380533	ES	0.5	50	50	ENSMUST00000060147.7	ENSMUSG00000046764.9	A530053G22Rik	chr6	lncRNA	RIKEN cDNA A530053G22 gene
chr6	60374645;60378671	60378601;60380533	-	60374645;60379162	60379023;60380533	MXE	0.5	100	100	ENSMUST00000204370.3	ENSMUSG00000046764.9	A530053G22Rik	chr6	lncRNA	RIKEN cDNA A530053G22 gene
chr6	60785970	60792601	-	60710171	60792601	A3SS	0.5	50	50	ENSMUST00000163779.8	ENSMUSG00000025889.14	Snca	chr6	protein_coding	synuclein, alpha
chr6	60804611	60805708	-	60804611	60806655	A5SS	0.5	50	50	ENSMUST00000163779.8	ENSMUSG00000025889.14	Snca	chr6	protein_coding	synuclein, alpha
chr6	60954778	60964061	+	60954778	60964058	A3SS	0.5	50	50	ENSMUST00000129603.4	ENSMUSG00000054641.11	Mmrn1	chr6	protein_coding	multimerin 1
chr6	61933717;62083289	62083244;62356769	+	61933717	62356769	cassetteExon	0.5	100	100	ENSMUST00000126214.8	ENSMUSG00000039578.18	Ccser1	chr6	protein_coding	coiled-coil serine rich 1
chr6	61400061	61446701	+	61400061	61547654	A3SS	0.5	50	50	ENSMUST00000126214.8	ENSMUSG00000039578.18	Ccser1	chr6	protein_coding	coiled-coil serine rich 1
chr6	61787692	61787808	+	61787692	61933673	A3SS	0.33	50	50	ENSMUST00000126214.8	ENSMUSG00000039578.18	Ccser1	chr6	protein_coding	coiled-coil serine rich 1
chr6	61787692	61796492	+	61787692	61933673	A3SS	0.33	50	50	ENSMUST00000126214.8	ENSMUSG00000039578.18	Ccser1	chr6	protein_coding	coiled-coil serine rich 1
chr6	61157585	61287798	+	61157637	61287798	A5SS	0.5	50	50	ENSMUST00000126214.8	ENSMUSG00000039578.18	Ccser1	chr6	protein_coding	coiled-coil serine rich 1
chr6	61296857	61350945	+	61290819	61350945	A5SS	0.5	50	50	ENSMUST00000126214.8	ENSMUSG00000039578.18	Ccser1	chr6	protein_coding	coiled-coil serine rich 1
chr6	61762192	61787615	+	61695212	61787615	A5SS	0.5	50	50	ENSMUST00000126214.8	ENSMUSG00000039578.18	Ccser1	chr6	protein_coding	coiled-coil serine rich 1
chr6	61787692	61796492	+	61787692	61787808	3pMXE	0.33	50	50	ENSMUST00000067307.11	ENSMUSG00000039578.18	Ccser1	chr6	protein_coding	coiled-coil serine rich 1
chr6	63233928	63480276	+	63233928	63288728	3pMXE	0.5	50	50	ENSMUST00000159319.2	ENSMUSG00000071424.11	Grid2	chr6	protein_coding	glutamate receptor, ionotropic, delta 2
chr6	64071423	64252779	+	64071423	64157171	3pMXE	0.5	50	50	ENSMUST00000159561.8	ENSMUSG00000071424.11	Grid2	chr6	protein_coding	glutamate receptor, ionotropic, delta 2
chr6	64640384	64677396	+	64640384	64642841	3pMXE	0.5	50	50	ENSMUST00000095852.5	ENSMUSG00000071424.11	Grid2	chr6	protein_coding	glutamate receptor, ionotropic, delta 2
chr6	65029781	65035050	+	65029781	65033387	3pMXE	0.5	50	50	ENSMUST00000204801.3	ENSMUSG00000029920.10	Smarcad1	chr6	protein_coding	SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
chr6	65020429;65021092	65020820;65029604	+	65020429	65029604	cassetteExon	0.5	100	100	ENSMUST00000204801.3	ENSMUSG00000029920.10	Smarcad1	chr6	protein_coding	SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
chr6	65020429;65027113	65027027;65029604	+	65020429	65029604	cassetteExon	0.5	100	100	ENSMUST00000204801.3	ENSMUSG00000029920.10	Smarcad1	chr6	protein_coding	SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
chr6	65019945	65020190	+	65019714	65020190	A5SS	0.5	50	50	ENSMUST00000204801.3	ENSMUSG00000029920.10	Smarcad1	chr6	protein_coding	SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
chr6	65029781	65035050	+	65029781;65033552	65033387;65035050	ES	0.25	50	50	ENSMUST00000031984.9	ENSMUSG00000029920.10	Smarcad1	chr6	protein_coding	SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
chr6	65052134;65052821	65052675;65060788	+	65052134	65060788	cassetteExon	0.5	100	100	ENSMUST00000031984.9	ENSMUSG00000029920.10	Smarcad1	chr6	protein_coding	SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
chr6	65052134	65057096	+	65052134	65060788	A3SS	0.33	50	50	ENSMUST00000031984.9	ENSMUSG00000029920.10	Smarcad1	chr6	protein_coding	SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
chr6	65033555	65035050	+	65033552	65035050	A5SS	0.25	50	50	ENSMUST00000031984.9	ENSMUSG00000029920.10	Smarcad1	chr6	protein_coding	SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
chr6	65034793	65035050	+	65033552	65035050	A5SS	0.25	50	50	ENSMUST00000031984.9	ENSMUSG00000029920.10	Smarcad1	chr6	protein_coding	SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
chr6	65020429	65027027	+	65020429	65020820	3pMXE	0.33	50	50	ENSMUST00000205118.3	ENSMUSG00000029920.10	Smarcad1	chr6	protein_coding	SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
chr6	65020429	65029604	+	65020429	65020820	3pMXE	0.33	50	50	ENSMUST00000205118.3	ENSMUSG00000029920.10	Smarcad1	chr6	protein_coding	SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
chr6	65020429;65021092	65020820;65029604	+	65020429;65027113	65027027;65029604	MXE	0.5	100	100	ENSMUST00000204114.3	ENSMUSG00000029920.10	Smarcad1	chr6	protein_coding	SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
chr6	65052134	65052675	+	65052134	65057096	A3SS	0.33	50	50	ENSMUST00000203756.3	ENSMUSG00000029920.10	Smarcad1	chr6	protein_coding	SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
chr6	65029781;65033555	65033387;65035050	+	65029781	65035050	cassetteExon	0.5	100	100	ENSMUST00000204620.3	ENSMUSG00000029920.10	Smarcad1	chr6	protein_coding	SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
chr6	65034793	65035050	+	65029781	65035050	A5SS	0.25	50	50	ENSMUST00000204620.3	ENSMUSG00000029920.10	Smarcad1	chr6	protein_coding	SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
chr6	65034793	65035050	+	65033555	65035050	A5SS	0.25	50	50	ENSMUST00000205092.3	ENSMUSG00000029920.10	Smarcad1	chr6	protein_coding	SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
chr6	65358614;65418329	65418171;65424345	+	65358614	65424345	cassetteExon	0.5	100	100	ENSMUST00000133352.8	ENSMUSG00000029917.16	Qrfprl	chr6	protein_coding	pyroglutamylated RFamide peptide receptor like
chr6	65358614;65418458	65418171;65424345	+	65358614	65424345	cassetteExon	0.5	100	100	ENSMUST00000133352.8	ENSMUSG00000029917.16	Qrfprl	chr6	protein_coding	pyroglutamylated RFamide peptide receptor like
chr6	65418458	65424345	+	65418329	65424345	A5SS	0.33	50	50	ENSMUST00000170608.8	ENSMUSG00000029917.16	Qrfprl	chr6	protein_coding	pyroglutamylated RFamide peptide receptor like
chr6	65358614	65424345	+	65418458	65424345	5pMXE	0.33	50	50	ENSMUST00000136016.3	ENSMUSG00000029917.16	Qrfprl	chr6	protein_coding	pyroglutamylated RFamide peptide receptor like
chr6	65554154	65567556	+	65554154	65567589	A3SS	0.5	50	50	ENSMUST00000212402.2	ENSMUSG00000044162.13	Tnip3	chr6	protein_coding	TNFAIP3 interacting protein 3
chr6	65567636	65568524	+	65567636	65570453	A3SS	0.5	50	50	ENSMUST00000212402.2	ENSMUSG00000044162.13	Tnip3	chr6	protein_coding	TNFAIP3 interacting protein 3
chr6	65756177	65808233	+	65756177;65771367	65771284;65808233	ES	0.5	50	50	ENSMUST00000031976.14	ENSMUSG00000029913.15	Prdm5	chr6	protein_coding	PR domain containing 5
chr6	65863162	65904901	+	65863162;65878843	65878758;65904901	ES	0.5	50	50	ENSMUST00000031976.14	ENSMUSG00000029913.15	Prdm5	chr6	protein_coding	PR domain containing 5
chr6	65808355	65832933	+	65808355	65863069	A3SS	0.33	50	50	ENSMUST00000081219.14	ENSMUSG00000029913.15	Prdm5	chr6	protein_coding	PR domain containing 5
chr6	65808355	65846165	+	65808355	65863069	A3SS	0.33	50	50	ENSMUST00000081219.14	ENSMUSG00000029913.15	Prdm5	chr6	protein_coding	PR domain containing 5
chr6	65860667	65863069	+	65808355	65863069	A5SS	0.5	50	50	ENSMUST00000081219.14	ENSMUSG00000029913.15	Prdm5	chr6	protein_coding	PR domain containing 5
chr6	65808355	65832933	+	65808355	65846165	A3SS	0.33	50	50	ENSMUST00000031973.13	ENSMUSG00000029913.15	Prdm5	chr6	protein_coding	PR domain containing 5
chr6	65839978	65846165	+	65808355	65846165	A5SS	0.5	50	50	ENSMUST00000031973.13	ENSMUSG00000029913.15	Prdm5	chr6	protein_coding	PR domain containing 5
chr6	66249537	66260355	+	66241416	66260355	A5SS	0.5	50	50	ENSMUST00000204874.2	ENSMUSG00000107653.2	Gm31520	chr6	transcribed_processed_pseudogene	predicted gene, 31520
chr6	66431428	66442495	-	66430530	66442495	A3SS	0.5	50	50	ENSMUST00000203716.2	ENSMUSG00000107479.2	2610300M13Rik	chr6	lncRNA	RIKEN cDNA 2610300M13 gene
chr6	66512774	66512942	+	66512583	66512942	A5SS	0.5	50	50	ENSMUST00000116605.8	ENSMUSG00000029910.15	Mad2l1	chr6	protein_coding	MAD2 mitotic arrest deficient-like 1
chr6	66531410	66536667	-	66531410;66533766	66533595;66536667	ES	0.5	50	50	ENSMUST00000079584.3	ENSMUSG00000062905.3	Vmn1r32	chr6	protein_coding	vomeronasal 1 receptor 32
chr6	66618770	66620741	-	66618770	66619311	5pMXE	0.33	50	50	ENSMUST00000226910.2	ENSMUSG00000091012.3	Vmn1r34	chr6	protein_coding	vomeronasal 1 receptor 34
chr6	66618770	66620821	-	66618770	66619311	5pMXE	0.33	50	50	ENSMUST00000226910.2	ENSMUSG00000091012.3	Vmn1r34	chr6	protein_coding	vomeronasal 1 receptor 34
chr6	66615573;66617653	66617558;66618516	-	66615573	66618516	cassetteExon	0.5	100	100	ENSMUST00000226910.2	ENSMUSG00000091012.3	Vmn1r34	chr6	protein_coding	vomeronasal 1 receptor 34
chr6	66618770	66620821	-	66618770	66620741	5pMXE	0.33	50	50	ENSMUST00000228647.2	ENSMUSG00000091012.3	Vmn1r34	chr6	protein_coding	vomeronasal 1 receptor 34
chr6	66656255	66660068	-	66656720	66660068	A3SS	0.5	50	50	ENSMUST00000227749.2	ENSMUSG00000060699.3	Vmn1r35	chr6	protein_coding	vomeronasal 1 receptor 35
chr6	66660328	66662500	-	66660263	66662500	A3SS	0.5	50	50	ENSMUST00000227749.2	ENSMUSG00000060699.3	Vmn1r35	chr6	protein_coding	vomeronasal 1 receptor 35
chr6	66693460	66695447	-	66693925	66695447	A3SS	0.33	50	50	ENSMUST00000226829.2	ENSMUSG00000115482.2	Vmn1r36	chr6	protein_coding	vomeronasal 1 receptor 36
chr6	66693772	66695447	-	66693925	66695447	A3SS	0.33	50	50	ENSMUST00000226829.2	ENSMUSG00000115482.2	Vmn1r36	chr6	protein_coding	vomeronasal 1 receptor 36
chr6	66693460	66695447	-	66693772	66695447	A3SS	0.33	50	50	ENSMUST00000226142.2	ENSMUSG00000115482.2	Vmn1r36	chr6	protein_coding	vomeronasal 1 receptor 36
chr6	66706435	66708477	+	66706435	66708324	A3SS	0.33	50	50	ENSMUST00000226974.2	ENSMUSG00000115467.2	Vmn1r37	chr6	protein_coding	vomeronasal 1 receptor 37
chr6	66706435	66708789	+	66706435	66708324	A3SS	0.33	50	50	ENSMUST00000226974.2	ENSMUSG00000115467.2	Vmn1r37	chr6	protein_coding	vomeronasal 1 receptor 37
chr6	66706795	66708324	+	66706435	66708324	A5SS	0.5	50	50	ENSMUST00000226974.2	ENSMUSG00000115467.2	Vmn1r37	chr6	protein_coding	vomeronasal 1 receptor 37
chr6	66706435	66708477	+	66706435	66708789	A3SS	0.33	50	50	ENSMUST00000226311.2	ENSMUSG00000115467.2	Vmn1r37	chr6	protein_coding	vomeronasal 1 receptor 37
chr6	66706795	66708789	+	66706435	66708789	A5SS	0.5	50	50	ENSMUST00000226311.2	ENSMUSG00000115467.2	Vmn1r37	chr6	protein_coding	vomeronasal 1 receptor 37
chr6	66706795	66708789	+	66706795	66708324	A3SS	0.5	50	50	ENSMUST00000227923.2	ENSMUSG00000115467.2	Vmn1r37	chr6	protein_coding	vomeronasal 1 receptor 37
chr6	66730848	66734536	-	66731161	66734536	A3SS	0.5	50	50	ENSMUST00000237175.2	ENSMUSG00000093504.3	Vmn1r-ps24	chr6	transcribed_unprocessed_pseudogene	vomeronasal 1 receptor, pseudogene 24
chr6	66734782	66736839	-	66734733	66736839	A3SS	0.5	50	50	ENSMUST00000237175.2	ENSMUSG00000093504.3	Vmn1r-ps24	chr6	transcribed_unprocessed_pseudogene	vomeronasal 1 receptor, pseudogene 24
chr6	66757381	66759598	-	66757381	66757581	5pMXE	0.5	50	50	ENSMUST00000227493.2	ENSMUSG00000115170.2	Vmn1r38	chr6	protein_coding	vomeronasal 1 receptor 38
chr6	66785561	66786176	-	66785561	66785902	5pMXE	0.33	50	50	ENSMUST00000226217.2	ENSMUSG00000093755.3	Vmn1r39	chr6	protein_coding	vomeronasal 1 receptor 39
chr6	66785561	66787501	-	66785561	66785902	5pMXE	0.33	50	50	ENSMUST00000226217.2	ENSMUSG00000093755.3	Vmn1r39	chr6	protein_coding	vomeronasal 1 receptor 39
chr6	66782215	66785446	-	66782368	66785446	A3SS	0.5	50	50	ENSMUST00000226217.2	ENSMUSG00000093755.3	Vmn1r39	chr6	protein_coding	vomeronasal 1 receptor 39
chr6	66785561	66787501	-	66785700	66787501	A3SS	0.5	50	50	ENSMUST00000228008.2	ENSMUSG00000093755.3	Vmn1r39	chr6	protein_coding	vomeronasal 1 receptor 39
chr6	66785561	66786176	-	66785561	66787501	A5SS	0.33	50	50	ENSMUST00000228651.2	ENSMUSG00000093755.3	Vmn1r39	chr6	protein_coding	vomeronasal 1 receptor 39
chr6	66891494	66992709	+	66891494;66920861	66920809;66992709	ES	0.33	50	50	ENSMUST00000043148.13	ENSMUSG00000036402.14	Gng12	chr6	protein_coding	guanine nucleotide binding protein (G protein), gamma 12
chr6	66873499	66891437	+	66873511	66891437	A5SS	0.33	50	50	ENSMUST00000043148.13	ENSMUSG00000036402.14	Gng12	chr6	protein_coding	guanine nucleotide binding protein (G protein), gamma 12
chr6	66873973	66891437	+	66873511	66891437	A5SS	0.33	50	50	ENSMUST00000043148.13	ENSMUSG00000036402.14	Gng12	chr6	protein_coding	guanine nucleotide binding protein (G protein), gamma 12
chr6	66920866	66992709	+	66920861	66992709	A5SS	0.33	50	50	ENSMUST00000043148.13	ENSMUSG00000036402.14	Gng12	chr6	protein_coding	guanine nucleotide binding protein (G protein), gamma 12
chr6	66994305	66994448	+	66992827	66994448	A5SS	0.5	50	50	ENSMUST00000043148.13	ENSMUSG00000036402.14	Gng12	chr6	protein_coding	guanine nucleotide binding protein (G protein), gamma 12
chr6	66891494;66920866	66920809;66992709	+	66891494	66992709	cassetteExon	0.5	100	100	ENSMUST00000114228.8	ENSMUSG00000036402.14	Gng12	chr6	protein_coding	guanine nucleotide binding protein (G protein), gamma 12
chr6	66873973	66891437	+	66873499	66891437	A5SS	0.33	50	50	ENSMUST00000114227.8	ENSMUSG00000036402.14	Gng12	chr6	protein_coding	guanine nucleotide binding protein (G protein), gamma 12
chr6	66968252	66985941	-	66968252	66985317	5pMXE	0.5	50	50	ENSMUST00000205197.2	ENSMUSG00000107634.2	Gm36816	chr6	lncRNA	predicted gene, 36816
chr6	67012756	67013994	-	67012756;67013899	67013662;67013994	ES	0.5	50	50	ENSMUST00000043098.9	ENSMUSG00000036390.9	Gadd45a	chr6	protein_coding	growth arrest and DNA-damage-inducible 45 alpha
chr6	67013899	67014185	-	67013899;67014095	67013994;67014185	ES	0.5	50	50	ENSMUST00000043098.9	ENSMUSG00000036390.9	Gadd45a	chr6	protein_coding	growth arrest and DNA-damage-inducible 45 alpha
chr6	67013899	67014185	-	67013899	67013994	A5SS	0.5	50	50	ENSMUST00000151958.2	ENSMUSG00000036390.9	Gadd45a	chr6	protein_coding	growth arrest and DNA-damage-inducible 45 alpha
chr6	67012756;67014095	67013994;67014185	-	67012756;67013899	67013662;67014185	MXE	0.5	100	100	ENSMUST00000204369.2	ENSMUSG00000036390.9	Gadd45a	chr6	protein_coding	growth arrest and DNA-damage-inducible 45 alpha
chr6	67012756	67013994	-	67012756	67013662	A5SS	0.5	50	50	ENSMUST00000128617.2	ENSMUSG00000036390.9	Gadd45a	chr6	protein_coding	growth arrest and DNA-damage-inducible 45 alpha
chr6	67012756	67013994	-	67013899	67013994	3pMXE	0.5	50	50	ENSMUST00000126194.2	ENSMUSG00000036390.9	Gadd45a	chr6	protein_coding	growth arrest and DNA-damage-inducible 45 alpha
chr6	67013899	67014185	-	67014095	67014185	A3SS	0.5	50	50	ENSMUST00000155041.2	ENSMUSG00000036390.9	Gadd45a	chr6	protein_coding	growth arrest and DNA-damage-inducible 45 alpha
chr6	67013919;67020902	67020743;67040379	+	67013919	67040379	cassetteExon	0.5	100	100	ENSMUST00000130657.8	ENSMUSG00000087231.8	E230016M11Rik	chr6	lncRNA	RIKEN cDNA E230016M11 gene
chr6	67043932;67051010	67050525;67056887	+	67043932;67055401	67054232;67056887	MXE	0.5	100	100	ENSMUST00000130657.8	ENSMUSG00000087231.8	E230016M11Rik	chr6	lncRNA	RIKEN cDNA E230016M11 gene
chr6	67043932	67054232	+	67043932	67050525	A3SS&ES	0.5	50	50	ENSMUST00000149889.2	ENSMUSG00000087231.8	E230016M11Rik	chr6	lncRNA	RIKEN cDNA E230016M11 gene
chr6	67055401	67056887	+	67051010	67056887	A5SS	0.5	50	50	ENSMUST00000149889.2	ENSMUSG00000087231.8	E230016M11Rik	chr6	lncRNA	RIKEN cDNA E230016M11 gene
chr6	67244393	67248182	+	67224474	67248182	A5SS	0.5	50	50	ENSMUST00000204810.2	ENSMUSG00000036371.7	Serbp1	chr6	protein_coding	serpine1 mRNA binding protein 1
chr6	67249011	67249141	+	67249011	67249123	A3SS	0.33	50	50	ENSMUST00000042990.7	ENSMUSG00000036371.7	Serbp1	chr6	protein_coding	serpine1 mRNA binding protein 1
chr6	67249011	67249848	+	67249011	67249123	A3SS&ES	0.33	50	50	ENSMUST00000042990.7	ENSMUSG00000036371.7	Serbp1	chr6	protein_coding	serpine1 mRNA binding protein 1
chr6	67249212	67249848	+	67249212	67249803	A3SS	0.5	50	50	ENSMUST00000042990.7	ENSMUSG00000036371.7	Serbp1	chr6	protein_coding	serpine1 mRNA binding protein 1
chr6	67249216	67249803	+	67249212	67249803	A5SS	0.5	50	50	ENSMUST00000042990.7	ENSMUSG00000036371.7	Serbp1	chr6	protein_coding	serpine1 mRNA binding protein 1
chr6	67249011	67249848	+	67249011	67249141	A3SS&ES	0.33	50	50	ENSMUST00000203436.3	ENSMUSG00000036371.7	Serbp1	chr6	protein_coding	serpine1 mRNA binding protein 1
chr6	67248304	67249141	+	67249011	67249141	A5SS&ES	0.5	50	50	ENSMUST00000203436.3	ENSMUSG00000036371.7	Serbp1	chr6	protein_coding	serpine1 mRNA binding protein 1
chr6	67249011;67249212	67249123;67249848	+	67249011	67249848	cassetteExon	0.5	100	100	ENSMUST00000205106.3	ENSMUSG00000036371.7	Serbp1	chr6	protein_coding	serpine1 mRNA binding protein 1
chr6	67249011;67249212	67249141;67249848	+	67249011	67249848	cassetteExon	0.5	100	100	ENSMUST00000205106.3	ENSMUSG00000036371.7	Serbp1	chr6	protein_coding	serpine1 mRNA binding protein 1
chr6	67248304	67249848	+	67249011	67249848	A5SS&ES	0.25	50	50	ENSMUST00000205106.3	ENSMUSG00000036371.7	Serbp1	chr6	protein_coding	serpine1 mRNA binding protein 1
chr6	67248313	67249848	+	67249011	67249848	A5SS&ES	0.25	50	50	ENSMUST00000205106.3	ENSMUSG00000036371.7	Serbp1	chr6	protein_coding	serpine1 mRNA binding protein 1
chr6	67248304	67249848	+	67249212	67249848	A5SS&ES	0.25	50	50	ENSMUST00000204293.3	ENSMUSG00000036371.7	Serbp1	chr6	protein_coding	serpine1 mRNA binding protein 1
chr6	67248313	67249848	+	67249212	67249848	A5SS&ES	0.25	50	50	ENSMUST00000204293.3	ENSMUSG00000036371.7	Serbp1	chr6	protein_coding	serpine1 mRNA binding protein 1
chr6	67248304	67249848	+	67248304;67249212	67249141;67249848	ES	0.25	50	50	ENSMUST00000205091.3	ENSMUSG00000036371.7	Serbp1	chr6	protein_coding	serpine1 mRNA binding protein 1
chr6	67249011	67249848	+	67249212	67249848	A5SS&ES	0.25	50	50	ENSMUST00000205091.3	ENSMUSG00000036371.7	Serbp1	chr6	protein_coding	serpine1 mRNA binding protein 1
chr6	67248304	67249848	+	67248313	67249848	A5SS	0.25	50	50	ENSMUST00000203233.3	ENSMUSG00000036371.7	Serbp1	chr6	protein_coding	serpine1 mRNA binding protein 1
chr6	67313750	67328223	-	67313750	67316583	5pMXE	0.5	50	50	ENSMUST00000117441.8	ENSMUSG00000018341.13	Il12rb2	chr6	protein_coding	interleukin 12 receptor, beta 2
chr6	67532668	67532888	+	67526034	67532888	A5SS	0.5	50	50	ENSMUST00000199480.2	ENSMUSG00000105650.2	Gm42889	chr6	lncRNA	predicted gene 42889
chr6	67768084	67768201	+	67768084	67768198	A3SS	0.5	50	50	ENSMUST00000196006.5	ENSMUSG00000096461.6	Igkv14-130	chr6	IG_V_gene	immunoglobulin kappa variable 14-130
chr6	67816831	67816956	+	67816831	67816953	A3SS	0.5	50	50	ENSMUST00000200578.5	ENSMUSG00000093906.6	Igkv9-129	chr6	IG_V_gene	immunoglobulin kappa variable 9-129
chr6	67838197	67838358	+	67838197	67838346	A3SS	0.5	50	50	ENSMUST00000200586.2	ENSMUSG00000076508.4	Igkv17-127	chr6	IG_V_gene	immunoglobulin kappa variable 17-127
chr6	67890611	67890742	+	67890611	67890739	A3SS	0.5	50	50	ENSMUST00000197406.5	ENSMUSG00000095737.6	Igkv11-125	chr6	IG_V_gene	immunoglobulin kappa variable 11-125
chr6	68197013	68197382	+	68197013	68197379	A3SS	0.5	50	50	ENSMUST00000103318.6	ENSMUSG00000076518.7	Igkv2-112	chr6	IG_V_gene	immunoglobulin kappa variable 2-112
chr6	68496050	68496167	+	68496050	68496164	A3SS	0.5	50	50	ENSMUST00000199510.5	ENSMUSG00000096515.6	Igkv14-100	chr6	IG_V_gene	immunoglobulin kappa chain variable 14-100
chr6	68518690	68519097	+	68518690	68519094	A3SS	0.5	50	50	ENSMUST00000168090.3	ENSMUSG00000076525.4	Igkv1-99	chr6	IG_V_gene	immunoglobulin kappa variable 1-99
chr6	68547795	68547925	+	68547795	68547922	A3SS	0.5	50	50	ENSMUST00000196839.5	ENSMUSG00000076526.7	Igkv12-98	chr6	IG_V_gene	immunoglobulin kappa variable 12-98
chr6	68713578	68713700	-	68713575	68713700	A3SS	0.5	50	50	ENSMUST00000183936.2	ENSMUSG00000098814.3	Igkv19-93	chr6	IG_V_gene	immunoglobulin kappa chain variable 19-93
chr6	68812124	68812252	-	68812127	68812252	A3SS	0.5	50	50	ENSMUST00000199143.5	ENSMUSG00000076534.7	Igkv12-89	chr6	IG_V_gene	immunoglobulin kappa chain variable 12-89
chr6	68887688	68887874	-	68887685	68887874	A3SS	0.5	50	50	ENSMUST00000103337.3	ENSMUSG00000076536.4	Igkv4-86	chr6	IG_V_gene	immunoglobulin kappa variable 4-86
chr6	69920464	69920584	-	69920467	69920584	A3SS	0.5	50	50	ENSMUST00000198880.5	ENSMUSG00000076570.7	Igkv12-38	chr6	IG_V_gene	immunoglobulin kappa chain variable 12-38
chr6	69969743	69969913	-	69969740	69969913	A3SS	0.5	50	50	ENSMUST00000200160.5	ENSMUSG00000076572.7	Igkv18-36	chr6	IG_V_gene	immunoglobulin kappa chain variable 18-36
chr6	69988242	69988609	-	69988245	69988609	A3SS	0.5	50	50	ENSMUST00000197820.5	ENSMUSG00000076573.7	Igkv1-35	chr6	IG_V_gene	immunoglobulin kappa variable 1-35
chr6	70035928	70036135	-	70035931	70036135	A3SS	0.5	50	50	ENSMUST00000197429.5	ENSMUSG00000076575.7	Igkv7-33	chr6	IG_V_gene	immunoglobulin kappa chain variable 7-33
chr6	70115743	70116018	-	70115740	70116018	A3SS	0.5	50	50	ENSMUST00000103379.3	ENSMUSG00000076578.4	Igkv6-29	chr6	IG_V_gene	immunoglobulin kappa chain variable 6-29
chr6	70363971	70364174	-	70363968	70364174	A3SS	0.5	50	50	ENSMUST00000103392.3	ENSMUSG00000076591.4	Igkv8-16	chr6	IG_V_gene	immunoglobulin kappa variable 8-16
chr6	70835500	70841482	+	70835500	70853662	A3SS	0.5	50	50	ENSMUST00000034093.15	ENSMUSG00000031668.15	Eif2ak3	chr6	protein_coding	eukaryotic translation initiation factor 2 alpha kinase 3
chr6	70855684	70855819	+	70853856	70855819	A5SS	0.5	50	50	ENSMUST00000034093.15	ENSMUSG00000031668.15	Eif2ak3	chr6	protein_coding	eukaryotic translation initiation factor 2 alpha kinase 3
chr6	71116927	71121275	-	71116927;71118438	71118204;71121275	ES	0.33	50	50	ENSMUST00000160918.8	ENSMUSG00000054474.16	Thnsl2	chr6	protein_coding	threonine synthase-like 2 (bacterial)
chr6	71118438;71118736	71118669;71121275	-	71118438	71121275	cassetteExon	0.5	100	100	ENSMUST00000160918.8	ENSMUSG00000054474.16	Thnsl2	chr6	protein_coding	threonine synthase-like 2 (bacterial)
chr6	71115806	71116733	-	71115787	71116733	A3SS	0.5	50	50	ENSMUST00000160918.8	ENSMUSG00000054474.16	Thnsl2	chr6	protein_coding	threonine synthase-like 2 (bacterial)
chr6	71118736	71121275	-	71116927	71121275	A3SS	0.33	50	50	ENSMUST00000170455.2	ENSMUSG00000054474.16	Thnsl2	chr6	protein_coding	threonine synthase-like 2 (bacterial)
chr6	71202505	71214341	-	71202505;71212365	71212327;71214341	ES	0.5	50	50	ENSMUST00000074301.10	ENSMUSG00000055027.18	Smyd1	chr6	protein_coding	SET and MYND domain containing 1
chr6	71216710	71298899	-	71216710	71239052	5pMXE	0.5	50	50	ENSMUST00000074301.10	ENSMUSG00000055027.18	Smyd1	chr6	protein_coding	SET and MYND domain containing 1
chr6	71236799	71239052	-	71216710	71239052	A3SS	0.5	50	50	ENSMUST00000074301.10	ENSMUSG00000055027.18	Smyd1	chr6	protein_coding	SET and MYND domain containing 1
chr6	71192893	71193841	-	71192893	71193712	A5SS	0.5	50	50	ENSMUST00000074301.10	ENSMUSG00000055027.18	Smyd1	chr6	protein_coding	SET and MYND domain containing 1
chr6	71289692	71298899	-	71216710	71298899	A3SS	0.5	50	50	ENSMUST00000114188.3	ENSMUSG00000055027.18	Smyd1	chr6	protein_coding	SET and MYND domain containing 1
chr6	71248824	71260948	+	71248824;71259301	71259135;71260948	ES	0.33	50	50	ENSMUST00000204436.3	ENSMUSG00000053012.18	Krcc1	chr6	protein_coding	lysine-rich coiled-coil 1
chr6	71259301;71260189	71260005;71260948	+	71259301	71260948	cassetteExon	0.5	100	100	ENSMUST00000204436.3	ENSMUSG00000053012.18	Krcc1	chr6	protein_coding	lysine-rich coiled-coil 1
chr6	71249043	71259135	+	71248824	71259135	A5SS	0.5	50	50	ENSMUST00000204436.3	ENSMUSG00000053012.18	Krcc1	chr6	protein_coding	lysine-rich coiled-coil 1
chr6	71260189	71260948	+	71248824	71260948	A5SS	0.33	50	50	ENSMUST00000205123.2	ENSMUSG00000053012.18	Krcc1	chr6	protein_coding	lysine-rich coiled-coil 1
chr6	71248824	71260948	+	71259301	71260948	5pMXE	0.33	50	50	ENSMUST00000080949.8	ENSMUSG00000053012.18	Krcc1	chr6	protein_coding	lysine-rich coiled-coil 1
chr6	71351853	71353844	+	71351853;71352902	71352872;71353844	ES	0.5	50	50	ENSMUST00000066747.14	ENSMUSG00000053977.14	Cd8a	chr6	protein_coding	CD8 antigen, alpha chain
chr6	71371763	71373058	-	71371763	71373836	A5SS	0.5	50	50	ENSMUST00000002292.15	ENSMUSG00000002222.15	Rmnd5a	chr6	protein_coding	required for meiotic nuclear division 5 homolog A
chr6	71482833	71485670	+	71482833	71485853	A3SS	0.5	50	50	ENSMUST00000064637.11	ENSMUSG00000052656.13	Rnf103	chr6	protein_coding	ring finger protein 103
chr6	71521017	71537881	+	71521017;71529443	71529383;71537881	ES	0.33	50	50	ENSMUST00000059462.12	ENSMUSG00000053119.12	Chmp3	chr6	protein_coding	charged multivesicular body protein 3
chr6	71529443	71551099	+	71529443;71538060	71537881;71551099	ES	0.5	50	50	ENSMUST00000059462.12	ENSMUSG00000053119.12	Chmp3	chr6	protein_coding	charged multivesicular body protein 3
chr6	71529443;71536112	71535959;71537881	+	71529443	71537881	cassetteExon	0.5	100	100	ENSMUST00000059462.12	ENSMUSG00000053119.12	Chmp3	chr6	protein_coding	charged multivesicular body protein 3
chr6	71529443;71536112	71535998;71537881	+	71529443	71537881	cassetteExon	0.5	100	100	ENSMUST00000059462.12	ENSMUSG00000053119.12	Chmp3	chr6	protein_coding	charged multivesicular body protein 3
chr6	71520951	71529383	+	71521017	71529383	A5SS	0.33	50	50	ENSMUST00000059462.12	ENSMUSG00000053119.12	Chmp3	chr6	protein_coding	charged multivesicular body protein 3
chr6	71521429	71529383	+	71521017	71529383	A5SS	0.33	50	50	ENSMUST00000059462.12	ENSMUSG00000053119.12	Chmp3	chr6	protein_coding	charged multivesicular body protein 3
chr6	71529443	71535998	+	71529443	71535959	A3SS	0.33	50	50	ENSMUST00000127774.8	ENSMUSG00000053119.12	Chmp3	chr6	protein_coding	charged multivesicular body protein 3
chr6	71521017	71537881	+	71536112	71537881	A5SS&ES	0.33	50	50	ENSMUST00000127774.8	ENSMUSG00000053119.12	Chmp3	chr6	protein_coding	charged multivesicular body protein 3
chr6	71521429	71529383	+	71520951	71529383	A5SS	0.33	50	50	ENSMUST00000127774.8	ENSMUSG00000053119.12	Chmp3	chr6	protein_coding	charged multivesicular body protein 3
chr6	71521017;71529443	71529383;71551099	+	71521017;71538060	71537881;71551099	MXE	0.5	100	100	ENSMUST00000204535.2	ENSMUSG00000053119.12	Chmp3	chr6	protein_coding	charged multivesicular body protein 3
chr6	71529443	71535959	+	71529443	71551099	A3SS	0.25	50	50	ENSMUST00000204199.2	ENSMUSG00000053119.12	Chmp3	chr6	protein_coding	charged multivesicular body protein 3
chr6	71529443	71535998	+	71529443	71551099	A3SS	0.25	50	50	ENSMUST00000204199.2	ENSMUSG00000053119.12	Chmp3	chr6	protein_coding	charged multivesicular body protein 3
chr6	71609255	71609822	-	71609255;71609563	71609481;71609822	ES	0.5	50	50	ENSMUST00000065509.11	ENSMUSG00000053470.14	Kdm3a	chr6	protein_coding	lysine (K)-specific demethylase 3A
chr6	71590979;71593854	71593802;71596942	-	71590979	71596942	cassetteExon	0.5	100	100	ENSMUST00000065509.11	ENSMUSG00000053470.14	Kdm3a	chr6	protein_coding	lysine (K)-specific demethylase 3A
chr6	71580409	71580918	-	71577859	71580918	A3SS	0.5	50	50	ENSMUST00000065509.11	ENSMUSG00000053470.14	Kdm3a	chr6	protein_coding	lysine (K)-specific demethylase 3A
chr6	71584590	71585989	-	71584590	71588489	A5SS	0.33	50	50	ENSMUST00000065509.11	ENSMUSG00000053470.14	Kdm3a	chr6	protein_coding	lysine (K)-specific demethylase 3A
chr6	71584590	71588883	-	71584590	71588489	A5SS	0.33	50	50	ENSMUST00000065509.11	ENSMUSG00000053470.14	Kdm3a	chr6	protein_coding	lysine (K)-specific demethylase 3A
chr6	71609255	71609822	-	71609255	71609481	5pMXE	0.5	50	50	ENSMUST00000167220.4	ENSMUSG00000053470.14	Kdm3a	chr6	protein_coding	lysine (K)-specific demethylase 3A
chr6	71584590	71588883	-	71584590	71585989	5pMXE	0.33	50	50	ENSMUST00000205470.2	ENSMUSG00000053470.14	Kdm3a	chr6	protein_coding	lysine (K)-specific demethylase 3A
chr6	71772308	71776150	+	71772308	71784775	A3SS	0.5	50	50	ENSMUST00000121469.2	ENSMUSG00000052852.9	Reep1	chr6	protein_coding	receptor accessory protein 1
chr6	71782478	71784775	+	71772308	71784775	A5SS	0.5	50	50	ENSMUST00000121469.2	ENSMUSG00000052852.9	Reep1	chr6	protein_coding	receptor accessory protein 1
chr6	71738425	71750172	+	71738425	71772131	A3SS	0.5	50	50	ENSMUST00000212631.2	ENSMUSG00000052852.9	Reep1	chr6	protein_coding	receptor accessory protein 1
chr6	71757819	71772131	+	71738425	71772131	A5SS	0.5	50	50	ENSMUST00000212631.2	ENSMUSG00000052852.9	Reep1	chr6	protein_coding	receptor accessory protein 1
chr6	71795842	71803703	-	71795842	71800700	5pMXE	0.33	50	50	ENSMUST00000065103.4	ENSMUSG00000052962.4	Mrpl35	chr6	protein_coding	mitochondrial ribosomal protein L35
chr6	71795842	71800501	-	71795842	71800700	A5SS	0.33	50	50	ENSMUST00000065103.4	ENSMUSG00000052962.4	Mrpl35	chr6	protein_coding	mitochondrial ribosomal protein L35
chr6	71795842	71803703	-	71795842	71800501	5pMXE	0.33	50	50	ENSMUST00000205435.2	ENSMUSG00000052962.4	Mrpl35	chr6	protein_coding	mitochondrial ribosomal protein L35
chr6	71829851	71833896	+	71829851;71830252	71830157;71833896	ES	0.33	50	50	ENSMUST00000064062.13	ENSMUSG00000052337.16	Immt	chr6	protein_coding	inner membrane protein, mitochondrial
chr6	71840254	71845564	+	71840254;71843724	71843710;71845564	ES	0.5	50	50	ENSMUST00000064062.13	ENSMUSG00000052337.16	Immt	chr6	protein_coding	inner membrane protein, mitochondrial
chr6	71848542	71851301	+	71848542;71849907	71849778;71851301	ES	0.33	50	50	ENSMUST00000064062.13	ENSMUSG00000052337.16	Immt	chr6	protein_coding	inner membrane protein, mitochondrial
chr6	71828864	71829747	+	71828864	71829714	A3SS	0.25	50	50	ENSMUST00000064062.13	ENSMUSG00000052337.16	Immt	chr6	protein_coding	inner membrane protein, mitochondrial
chr6	71828864	71829750	+	71828864	71829714	A3SS	0.25	50	50	ENSMUST00000064062.13	ENSMUSG00000052337.16	Immt	chr6	protein_coding	inner membrane protein, mitochondrial
chr6	71849878	71851301	+	71849907	71851301	A5SS	0.33	50	50	ENSMUST00000064062.13	ENSMUSG00000052337.16	Immt	chr6	protein_coding	inner membrane protein, mitochondrial
chr6	71848542	71851301	+	71848542;71849878	71849778;71851301	ES	0.33	50	50	ENSMUST00000166975.8	ENSMUSG00000052337.16	Immt	chr6	protein_coding	inner membrane protein, mitochondrial
chr6	71828864;71829851	71829714;71833896	+	71828864	71833896	cassetteExon	0.5	100	100	ENSMUST00000166975.8	ENSMUSG00000052337.16	Immt	chr6	protein_coding	inner membrane protein, mitochondrial
chr6	71828864;71829851	71829747;71833896	+	71828864	71833896	cassetteExon	0.5	100	100	ENSMUST00000166975.8	ENSMUSG00000052337.16	Immt	chr6	protein_coding	inner membrane protein, mitochondrial
chr6	71828864;71829851	71829750;71833896	+	71828864	71833896	cassetteExon	0.5	100	100	ENSMUST00000166975.8	ENSMUSG00000052337.16	Immt	chr6	protein_coding	inner membrane protein, mitochondrial
chr6	71830252	71833896	+	71828864	71833896	A5SS	0.33	50	50	ENSMUST00000166975.8	ENSMUSG00000052337.16	Immt	chr6	protein_coding	inner membrane protein, mitochondrial
chr6	71828864	71833896	+	71828864	71829747	3pMXE	0.25	50	50	ENSMUST00000167244.2	ENSMUSG00000052337.16	Immt	chr6	protein_coding	inner membrane protein, mitochondrial
chr6	71828864	71829750	+	71828864	71829747	A3SS	0.25	50	50	ENSMUST00000167244.2	ENSMUSG00000052337.16	Immt	chr6	protein_coding	inner membrane protein, mitochondrial
chr6	71871356	71872889	-	71871356;71871865	71871805;71872889	ES	0.33	50	50	ENSMUST00000082094.5	ENSMUSG00000063884.7	Ptcd3	chr6	protein_coding	pentatricopeptide repeat domain 3
chr6	71882127	71884778	-	71882127;71884673	71884637;71884778	ES	0.5	50	50	ENSMUST00000082094.5	ENSMUSG00000063884.7	Ptcd3	chr6	protein_coding	pentatricopeptide repeat domain 3
chr6	71871865;71872677	71872602;71872889	-	71871865	71872889	cassetteExon	0.5	100	100	ENSMUST00000082094.5	ENSMUSG00000063884.7	Ptcd3	chr6	protein_coding	pentatricopeptide repeat domain 3
chr6	71860586	71861524	-	71860576	71861524	A3SS	0.5	50	50	ENSMUST00000082094.5	ENSMUSG00000063884.7	Ptcd3	chr6	protein_coding	pentatricopeptide repeat domain 3
chr6	71872677	71872889	-	71871356	71872889	A3SS	0.33	50	50	ENSMUST00000205556.2	ENSMUSG00000063884.7	Ptcd3	chr6	protein_coding	pentatricopeptide repeat domain 3
chr6	71871356	71872889	-	71871356	71871805	5pMXE	0.5	50	50	ENSMUST00000206631.2	ENSMUSG00000063884.7	Ptcd3	chr6	protein_coding	pentatricopeptide repeat domain 3
chr6	71901681	71903268	+	71901681;71902023	71901952;71903268	ES	0.5	50	50	ENSMUST00000206556.2	ENSMUSG00000049553.12	Polr1a	chr6	protein_coding	polymerase (RNA) I polypeptide A
chr6	71925483	71927564	+	71925483;71926507	71926324;71927564	ES	0.5	50	50	ENSMUST00000206556.2	ENSMUSG00000049553.12	Polr1a	chr6	protein_coding	polymerase (RNA) I polypeptide A
chr6	71889657	71889860	+	71886223	71889860	A5SS	0.5	50	50	ENSMUST00000206556.2	ENSMUSG00000049553.12	Polr1a	chr6	protein_coding	polymerase (RNA) I polypeptide A
chr6	71908337	71908578	+	71906771	71908578	A5SS	0.5	50	50	ENSMUST00000206556.2	ENSMUSG00000049553.12	Polr1a	chr6	protein_coding	polymerase (RNA) I polypeptide A
chr6	71913112	71913280	+	71908808	71913280	A5SS	0.5	50	50	ENSMUST00000206556.2	ENSMUSG00000049553.12	Polr1a	chr6	protein_coding	polymerase (RNA) I polypeptide A
chr6	71925483	71927564	+	71925483	71926324	3pMXE	0.5	50	50	ENSMUST00000206982.2	ENSMUSG00000049553.12	Polr1a	chr6	protein_coding	polymerase (RNA) I polypeptide A
chr6	72074978	72105248	+	72074766	72105248	A5SS	0.33	50	50	ENSMUST00000069994.11	ENSMUSG00000056091.13	St3gal5	chr6	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 5
chr6	72074978	72119124	+	72109147	72119124	A5SS&ES	0.5	50	50	ENSMUST00000069994.11	ENSMUSG00000056091.13	St3gal5	chr6	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 5
chr6	72092363	72105248	+	72074766	72105248	A5SS	0.33	50	50	ENSMUST00000069994.11	ENSMUSG00000056091.13	St3gal5	chr6	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 5
chr6	72092363	72105248	+	72074978	72105248	A5SS	0.33	50	50	ENSMUST00000114112.4	ENSMUSG00000056091.13	St3gal5	chr6	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 5
chr6	72074978	72105248	+	72074978	72119124	A3SS	0.5	50	50	ENSMUST00000187007.3	ENSMUSG00000056091.13	St3gal5	chr6	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 5
chr6	72098611	72099829	-	72098592	72099829	A3SS	0.5	50	50	ENSMUST00000206696.2	ENSMUSG00000108709.2	4933431G14Rik	chr6	lncRNA	RIKEN cDNA 4933431G14 gene
chr6	72200917	72211378	-	72200917;72204242	72204091;72211378	ES	0.5	50	50	ENSMUST00000206425.2	ENSMUSG00000037621.9	Atoh8	chr6	protein_coding	atonal bHLH transcription factor 8
chr6	72284227	72286740	+	72284227	72286809	A3SS	0.5	50	50	ENSMUST00000183018.8	ENSMUSG00000056370.18	Sftpb	chr6	protein_coding	surfactant associated protein B
chr6	72289930	72290957	+	72289930	72290960	A3SS	0.5	50	50	ENSMUST00000183018.8	ENSMUSG00000056370.18	Sftpb	chr6	protein_coding	surfactant associated protein B
chr6	72315532	72316950	-	72315512	72316950	A3SS	0.5	50	50	ENSMUST00000070345.5	ENSMUSG00000056305.5	Usp39	chr6	protein_coding	ubiquitin specific peptidase 39
chr6	72333295	72334033	+	72333295;72333752	72333705;72334033	ES	0.33	50	50	ENSMUST00000069695.9	ENSMUSG00000055912.9	Tmem150a	chr6	protein_coding	transmembrane protein 150A
chr6	72334119	72335291	+	72334119;72334999	72334932;72335291	ES	0.5	50	50	ENSMUST00000069695.9	ENSMUSG00000055912.9	Tmem150a	chr6	protein_coding	transmembrane protein 150A
chr6	72335418	72335989	+	72335418;72335739	72335562;72335989	ES	0.5	50	50	ENSMUST00000069695.9	ENSMUSG00000055912.9	Tmem150a	chr6	protein_coding	transmembrane protein 150A
chr6	72332527	72333124	+	72332527	72333114	A3SS	0.5	50	50	ENSMUST00000069695.9	ENSMUSG00000055912.9	Tmem150a	chr6	protein_coding	transmembrane protein 150A
chr6	72333151	72334033	+	72333752	72334033	A5SS&ES	0.33	50	50	ENSMUST00000069695.9	ENSMUSG00000055912.9	Tmem150a	chr6	protein_coding	transmembrane protein 150A
chr6	72333295	72334033	+	72333151	72334033	A5SS	0.33	50	50	ENSMUST00000206821.2	ENSMUSG00000055912.9	Tmem150a	chr6	protein_coding	transmembrane protein 150A
chr6	72335418	72335989	+	72335418	72335562	3pMXE	0.5	50	50	ENSMUST00000206531.2	ENSMUSG00000055912.9	Tmem150a	chr6	protein_coding	transmembrane protein 150A
chr6	72337932	72338105	-	72337932	72338100	A5SS	0.5	50	50	ENSMUST00000069595.13	ENSMUSG00000055850.13	Rnf181	chr6	protein_coding	ring finger protein 181
chr6	72338209	72338295	-	72338209	72339300	A5SS	0.2	50	50	ENSMUST00000069595.13	ENSMUSG00000055850.13	Rnf181	chr6	protein_coding	ring finger protein 181
chr6	72338209	72338395	-	72338209	72339300	A5SS	0.2	50	50	ENSMUST00000069595.13	ENSMUSG00000055850.13	Rnf181	chr6	protein_coding	ring finger protein 181
chr6	72338209	72339224	-	72338209	72339300	A5SS	0.2	50	50	ENSMUST00000069595.13	ENSMUSG00000055850.13	Rnf181	chr6	protein_coding	ring finger protein 181
chr6	72338209	72339259	-	72338209	72339300	A5SS	0.2	50	50	ENSMUST00000069595.13	ENSMUSG00000055850.13	Rnf181	chr6	protein_coding	ring finger protein 181
chr6	72338209	72339224	-	72338209;72338522	72338395;72339224	ES	0.5	50	50	ENSMUST00000069580.12	ENSMUSG00000055850.13	Rnf181	chr6	protein_coding	ring finger protein 181
chr6	72338522	72339504	-	72338522	72339224	5pMXE	0.33	50	50	ENSMUST00000069580.12	ENSMUSG00000055850.13	Rnf181	chr6	protein_coding	ring finger protein 181
chr6	72338174	72338395	-	72338209	72338395	A3SS	0.5	50	50	ENSMUST00000069580.12	ENSMUSG00000055850.13	Rnf181	chr6	protein_coding	ring finger protein 181
chr6	72338209	72338295	-	72338209	72338395	A5SS	0.2	50	50	ENSMUST00000069580.12	ENSMUSG00000055850.13	Rnf181	chr6	protein_coding	ring finger protein 181
chr6	72338209	72339259	-	72338209	72338395	A5SS&ES	0.2	50	50	ENSMUST00000069580.12	ENSMUSG00000055850.13	Rnf181	chr6	protein_coding	ring finger protein 181
chr6	72338522	72339259	-	72338522	72339224	A5SS	0.33	50	50	ENSMUST00000069580.12	ENSMUSG00000055850.13	Rnf181	chr6	protein_coding	ring finger protein 181
chr6	72338209	72339259	-	72338209;72338353	72338295;72339259	ES	0.33	50	50	ENSMUST00000125554.8	ENSMUSG00000055850.13	Rnf181	chr6	protein_coding	ring finger protein 181
chr6	72338209;72338522	72338395;72339259	-	72338209;72338353	72338295;72339259	MXE	0.5	100	100	ENSMUST00000125554.8	ENSMUSG00000055850.13	Rnf181	chr6	protein_coding	ring finger protein 181
chr6	72338209	72339224	-	72338209	72338295	A5SS&ES	0.2	50	50	ENSMUST00000125554.8	ENSMUSG00000055850.13	Rnf181	chr6	protein_coding	ring finger protein 181
chr6	72338209	72339259	-	72338209	72338295	5pMXE	0.2	50	50	ENSMUST00000130064.8	ENSMUSG00000055850.13	Rnf181	chr6	protein_coding	ring finger protein 181
chr6	72338209	72339224	-	72338209	72338395	A5SS&ES	0.2	50	50	ENSMUST00000154098.3	ENSMUSG00000055850.13	Rnf181	chr6	protein_coding	ring finger protein 181
chr6	72338522	72339259	-	72338522	72339504	A5SS	0.33	50	50	ENSMUST00000154098.3	ENSMUSG00000055850.13	Rnf181	chr6	protein_coding	ring finger protein 181
chr6	72338209	72339259	-	72338522	72339259	A3SS&ES	0.33	50	50	ENSMUST00000149296.8	ENSMUSG00000055850.13	Rnf181	chr6	protein_coding	ring finger protein 181
chr6	72338353	72339259	-	72338522	72339259	A3SS&ES	0.33	50	50	ENSMUST00000149296.8	ENSMUSG00000055850.13	Rnf181	chr6	protein_coding	ring finger protein 181
chr6	72338209	72339259	-	72338209;72338522	72338395;72339259	ES	0.33	50	50	ENSMUST00000129233.8	ENSMUSG00000055850.13	Rnf181	chr6	protein_coding	ring finger protein 181
chr6	72337996	72338105	-	72337932	72338105	A3SS	0.5	50	50	ENSMUST00000129233.8	ENSMUSG00000055850.13	Rnf181	chr6	protein_coding	ring finger protein 181
chr6	72338209;72338522	72338295;72339259	-	72338209	72339259	cassetteExon	0.5	100	100	ENSMUST00000126065.8	ENSMUSG00000055850.13	Rnf181	chr6	protein_coding	ring finger protein 181
chr6	72338209	72339224	-	72338209	72339259	A5SS	0.2	50	50	ENSMUST00000126065.8	ENSMUSG00000055850.13	Rnf181	chr6	protein_coding	ring finger protein 181
chr6	72338209;72338522	72338295;72339224	-	72338209	72339224	cassetteExon	0.5	100	100	ENSMUST00000151063.2	ENSMUSG00000055850.13	Rnf181	chr6	protein_coding	ring finger protein 181
chr6	72404156	72405441	+	72404156;72405032	72404881;72405441	ES	0.33	50	50	ENSMUST00000065906.9	ENSMUSG00000053460.9	Ggcx	chr6	protein_coding	gamma-glutamyl carboxylase
chr6	72395449;72396249	72396000;72399399	+	72395449	72399399	cassetteExon	0.5	100	100	ENSMUST00000065906.9	ENSMUSG00000053460.9	Ggcx	chr6	protein_coding	gamma-glutamyl carboxylase
chr6	72394996	72395219	+	72394996	72395284	A3SS	0.5	50	50	ENSMUST00000065906.9	ENSMUSG00000053460.9	Ggcx	chr6	protein_coding	gamma-glutamyl carboxylase
chr6	72395350	72399399	+	72395449	72399399	A5SS	0.33	50	50	ENSMUST00000065906.9	ENSMUSG00000053460.9	Ggcx	chr6	protein_coding	gamma-glutamyl carboxylase
chr6	72404963	72405441	+	72405032	72405441	A5SS	0.33	50	50	ENSMUST00000065906.9	ENSMUSG00000053460.9	Ggcx	chr6	protein_coding	gamma-glutamyl carboxylase
chr6	72404156	72405441	+	72404156;72404963	72404881;72405441	ES	0.33	50	50	ENSMUST00000207012.2	ENSMUSG00000053460.9	Ggcx	chr6	protein_coding	gamma-glutamyl carboxylase
chr6	72394996	72395219	+	72394967	72395219	A5SS	0.5	50	50	ENSMUST00000207012.2	ENSMUSG00000053460.9	Ggcx	chr6	protein_coding	gamma-glutamyl carboxylase
chr6	72396249	72399399	+	72395350	72399399	A5SS	0.33	50	50	ENSMUST00000207012.2	ENSMUSG00000053460.9	Ggcx	chr6	protein_coding	gamma-glutamyl carboxylase
chr6	72413012	72413400	-	72413012;72413323	72413180;72413400	ES	0.5	50	50	ENSMUST00000205335.2	ENSMUSG00000053907.11	Mat2a	chr6	protein_coding	methionine adenosyltransferase II, alpha
chr6	72414431;72414887	72414835;72416329	-	72414431	72416329	cassetteExon	0.5	100	100	ENSMUST00000205335.2	ENSMUSG00000053907.11	Mat2a	chr6	protein_coding	methionine adenosyltransferase II, alpha
chr6	72411378;72411722	72411642;72411964	-	72411378	72411964	cassetteExon	0.5	100	100	ENSMUST00000059472.10	ENSMUSG00000053907.11	Mat2a	chr6	protein_coding	methionine adenosyltransferase II, alpha
chr6	72411378	72411964	-	72411722	72411964	3pMXE	0.5	50	50	ENSMUST00000206692.2	ENSMUSG00000053907.11	Mat2a	chr6	protein_coding	methionine adenosyltransferase II, alpha
chr6	72492962	72493525	-	72492962;72493396	72493372;72493525	ES	0.33	50	50	ENSMUST00000162561.9	ENSMUSG00000052631.16	Sh2d6	chr6	protein_coding	SH2 domain containing 6
chr6	72492962;72493198	72493121;72493372	-	72492962	72493372	cassetteExon	0.5	100	100	ENSMUST00000162561.9	ENSMUSG00000052631.16	Sh2d6	chr6	protein_coding	SH2 domain containing 6
chr6	72490837	72492209	-	72491024	72492209	A3SS	0.5	50	50	ENSMUST00000162561.9	ENSMUSG00000052631.16	Sh2d6	chr6	protein_coding	SH2 domain containing 6
chr6	72492932	72493525	-	72493396	72493525	A3SS&ES	0.33	50	50	ENSMUST00000162561.9	ENSMUSG00000052631.16	Sh2d6	chr6	protein_coding	SH2 domain containing 6
chr6	72496865	72496943	-	72496865	72497438	A5SS	0.25	50	50	ENSMUST00000162561.9	ENSMUSG00000052631.16	Sh2d6	chr6	protein_coding	SH2 domain containing 6
chr6	72496865	72497502	-	72496865	72497438	A5SS	0.25	50	50	ENSMUST00000162561.9	ENSMUSG00000052631.16	Sh2d6	chr6	protein_coding	SH2 domain containing 6
chr6	72496865	72497507	-	72496865	72497438	A5SS	0.25	50	50	ENSMUST00000162561.9	ENSMUSG00000052631.16	Sh2d6	chr6	protein_coding	SH2 domain containing 6
chr6	72496865	72497502	-	72496865	72496943	5pMXE	0.25	50	50	ENSMUST00000160123.9	ENSMUSG00000052631.16	Sh2d6	chr6	protein_coding	SH2 domain containing 6
chr6	72496865	72497507	-	72496865	72496943	5pMXE	0.25	50	50	ENSMUST00000160123.9	ENSMUSG00000052631.16	Sh2d6	chr6	protein_coding	SH2 domain containing 6
chr6	72496865	72497502	-	72496865	72497507	A5SS	0.25	50	50	ENSMUST00000234220.2	ENSMUSG00000052631.16	Sh2d6	chr6	protein_coding	SH2 domain containing 6
chr6	72492962	72493525	-	72492932	72493525	A3SS	0.33	50	50	ENSMUST00000160761.3	ENSMUSG00000052631.16	Sh2d6	chr6	protein_coding	SH2 domain containing 6
chr6	72492962;72493396	72493121;72493525	-	72492962	72493525	cassetteExon	0.5	100	100	ENSMUST00000159577.3	ENSMUSG00000052631.16	Sh2d6	chr6	protein_coding	SH2 domain containing 6
chr6	72521860	72532256	+	72521449	72532256	A5SS	0.14	50	50	ENSMUST00000071044.13	ENSMUSG00000056737.15	Capg	chr6	protein_coding	capping protein (actin filament), gelsolin-like
chr6	72522848	72532256	+	72521449	72532256	A5SS	0.14	50	50	ENSMUST00000071044.13	ENSMUSG00000056737.15	Capg	chr6	protein_coding	capping protein (actin filament), gelsolin-like
chr6	72525009	72532256	+	72521449	72532256	A5SS	0.14	50	50	ENSMUST00000071044.13	ENSMUSG00000056737.15	Capg	chr6	protein_coding	capping protein (actin filament), gelsolin-like
chr6	72526484	72532256	+	72521449	72532256	A5SS	0.14	50	50	ENSMUST00000071044.13	ENSMUSG00000056737.15	Capg	chr6	protein_coding	capping protein (actin filament), gelsolin-like
chr6	72526851	72532256	+	72521449	72532256	A5SS	0.14	50	50	ENSMUST00000071044.13	ENSMUSG00000056737.15	Capg	chr6	protein_coding	capping protein (actin filament), gelsolin-like
chr6	72530002	72532256	+	72521449	72532256	A5SS	0.14	50	50	ENSMUST00000071044.13	ENSMUSG00000056737.15	Capg	chr6	protein_coding	capping protein (actin filament), gelsolin-like
chr6	72522848	72532256	+	72521860	72532256	A5SS	0.16	50	50	ENSMUST00000114072.8	ENSMUSG00000056737.15	Capg	chr6	protein_coding	capping protein (actin filament), gelsolin-like
chr6	72525009	72532256	+	72521860	72532256	A5SS	0.16	50	50	ENSMUST00000114072.8	ENSMUSG00000056737.15	Capg	chr6	protein_coding	capping protein (actin filament), gelsolin-like
chr6	72526484	72532256	+	72521860	72532256	A5SS	0.16	50	50	ENSMUST00000114072.8	ENSMUSG00000056737.15	Capg	chr6	protein_coding	capping protein (actin filament), gelsolin-like
chr6	72526851	72532256	+	72521860	72532256	A5SS	0.16	50	50	ENSMUST00000114072.8	ENSMUSG00000056737.15	Capg	chr6	protein_coding	capping protein (actin filament), gelsolin-like
chr6	72530002	72532256	+	72521860	72532256	A5SS	0.16	50	50	ENSMUST00000114072.8	ENSMUSG00000056737.15	Capg	chr6	protein_coding	capping protein (actin filament), gelsolin-like
chr6	72525009	72532256	+	72522848	72532256	A5SS	0.14	50	50	ENSMUST00000155188.8	ENSMUSG00000056737.15	Capg	chr6	protein_coding	capping protein (actin filament), gelsolin-like
chr6	72526484	72532256	+	72522848	72532256	A5SS	0.14	50	50	ENSMUST00000155188.8	ENSMUSG00000056737.15	Capg	chr6	protein_coding	capping protein (actin filament), gelsolin-like
chr6	72526851	72532256	+	72522848	72532256	A5SS	0.14	50	50	ENSMUST00000155188.8	ENSMUSG00000056737.15	Capg	chr6	protein_coding	capping protein (actin filament), gelsolin-like
chr6	72530002	72532256	+	72522848	72532256	A5SS	0.14	50	50	ENSMUST00000155188.8	ENSMUSG00000056737.15	Capg	chr6	protein_coding	capping protein (actin filament), gelsolin-like
chr6	72526484	72532256	+	72525009	72532256	A5SS	0.14	50	50	ENSMUST00000126124.8	ENSMUSG00000056737.15	Capg	chr6	protein_coding	capping protein (actin filament), gelsolin-like
chr6	72526851	72532256	+	72525009	72532256	A5SS	0.14	50	50	ENSMUST00000126124.8	ENSMUSG00000056737.15	Capg	chr6	protein_coding	capping protein (actin filament), gelsolin-like
chr6	72530002	72532256	+	72525009	72532256	A5SS	0.14	50	50	ENSMUST00000126124.8	ENSMUSG00000056737.15	Capg	chr6	protein_coding	capping protein (actin filament), gelsolin-like
chr6	72526484;72526851	72526713;72532256	+	72526484	72532256	cassetteExon	0.5	100	100	ENSMUST00000114071.8	ENSMUSG00000056737.15	Capg	chr6	protein_coding	capping protein (actin filament), gelsolin-like
chr6	72530002	72532256	+	72526484	72532256	A5SS	0.14	50	50	ENSMUST00000114071.8	ENSMUSG00000056737.15	Capg	chr6	protein_coding	capping protein (actin filament), gelsolin-like
chr6	72530002	72532256	+	72526851	72532256	A5SS	0.33	50	50	ENSMUST00000155705.8	ENSMUSG00000056737.15	Capg	chr6	protein_coding	capping protein (actin filament), gelsolin-like
chr6	72526484	72532256	+	72526851	72532256	5pMXE	0.14	50	50	ENSMUST00000134809.8	ENSMUSG00000056737.15	Capg	chr6	protein_coding	capping protein (actin filament), gelsolin-like
chr6	72572003	72575305	-	72572003;72573449	72573419;72575305	ES	0.33	50	50	ENSMUST00000114069.8	ENSMUSG00000056698.12	Elmod3	chr6	protein_coding	ELMO/CED-12 domain containing 3
chr6	72573449;72574628	72574607;72575305	-	72573449	72575305	cassetteExon	0.5	100	100	ENSMUST00000114069.8	ENSMUSG00000056698.12	Elmod3	chr6	protein_coding	ELMO/CED-12 domain containing 3
chr6	72561476	72563428	-	72557352	72563428	A3SS	0.5	50	50	ENSMUST00000114069.8	ENSMUSG00000056698.12	Elmod3	chr6	protein_coding	ELMO/CED-12 domain containing 3
chr6	72574628	72575305	-	72572003	72575305	A3SS	0.33	50	50	ENSMUST00000070990.8	ENSMUSG00000056698.12	Elmod3	chr6	protein_coding	ELMO/CED-12 domain containing 3
chr6	72573449	72574607	-	72571739	72574607	A3SS	0.5	50	50	ENSMUST00000148108.8	ENSMUSG00000056698.12	Elmod3	chr6	protein_coding	ELMO/CED-12 domain containing 3
chr6	72573449	72575305	-	72574628	72575305	A3SS&ES	0.33	50	50	ENSMUST00000148108.8	ENSMUSG00000056698.12	Elmod3	chr6	protein_coding	ELMO/CED-12 domain containing 3
chr6	72575779	72578459	+	72575779;72578138	72577956;72578459	ES	0.5	50	50	ENSMUST00000070597.13	ENSMUSG00000056666.14	Retsat	chr6	protein_coding	retinol saturase (all trans retinol 13,14 reductase)
chr6	72583722	72584225	+	72583722;72584016	72583857;72584225	ES	0.5	50	50	ENSMUST00000070597.13	ENSMUSG00000056666.14	Retsat	chr6	protein_coding	retinol saturase (all trans retinol 13,14 reductase)
chr6	72581687	72581849	+	72580834	72581849	A5SS	0.5	50	50	ENSMUST00000070597.13	ENSMUSG00000056666.14	Retsat	chr6	protein_coding	retinol saturase (all trans retinol 13,14 reductase)
chr6	72575779	72577956	+	72575779	72580637	A3SS	0.33	50	50	ENSMUST00000176168.3	ENSMUSG00000056666.14	Retsat	chr6	protein_coding	retinol saturase (all trans retinol 13,14 reductase)
chr6	72575779	72578459	+	72575779	72580637	A3SS	0.33	50	50	ENSMUST00000176168.3	ENSMUSG00000056666.14	Retsat	chr6	protein_coding	retinol saturase (all trans retinol 13,14 reductase)
chr6	72579839	72580637	+	72575779	72580637	A5SS	0.5	50	50	ENSMUST00000176168.3	ENSMUSG00000056666.14	Retsat	chr6	protein_coding	retinol saturase (all trans retinol 13,14 reductase)
chr6	72583722	72584225	+	72583722	72583857	3pMXE	0.5	50	50	ENSMUST00000129071.2	ENSMUSG00000056666.14	Retsat	chr6	protein_coding	retinol saturase (all trans retinol 13,14 reductase)
chr6	72611215;72625825	72625784;72626103	-	72611215	72626103	cassetteExon	0.5	100	100	ENSMUST00000069536.12	ENSMUSG00000055799.14	Tcf7l1	chr6	protein_coding	transcription factor 7 like 1 (T cell specific, HMG box)
chr6	72610244	72611083	-	72610301	72611083	A3SS	0.5	50	50	ENSMUST00000069536.12	ENSMUSG00000055799.14	Tcf7l1	chr6	protein_coding	transcription factor 7 like 1 (T cell specific, HMG box)
chr6	72626186	72647787	-	72626186	72765194	A5SS	0.5	50	50	ENSMUST00000069536.12	ENSMUSG00000055799.14	Tcf7l1	chr6	protein_coding	transcription factor 7 like 1 (T cell specific, HMG box)
chr6	72611215	72626103	-	72625825	72626103	3pMXE	0.5	50	50	ENSMUST00000182651.2	ENSMUSG00000055799.14	Tcf7l1	chr6	protein_coding	transcription factor 7 like 1 (T cell specific, HMG box)
chr6	72607128	72608094	+	72607128	72613305	A3SS	0.5	50	50	ENSMUST00000156497.8	ENSMUSG00000072999.10	Gm15401	chr6	lncRNA	predicted gene 15401
chr6	72609941	72613305	+	72607128	72613305	A5SS	0.5	50	50	ENSMUST00000156497.8	ENSMUSG00000072999.10	Gm15401	chr6	lncRNA	predicted gene 15401
chr6	72827467	72838741	-	72827467;72835896	72835757;72838741	ES	0.5	50	50	ENSMUST00000068697.11	ENSMUSG00000055239.11	Kcmf1	chr6	protein_coding	potassium channel modulatory factor 1
chr6	72838908	72875963	-	72838908	72876597	A5SS	0.5	50	50	ENSMUST00000068697.11	ENSMUSG00000055239.11	Kcmf1	chr6	protein_coding	potassium channel modulatory factor 1
chr6	72820113;72825490	72825208;72835757	-	72820113	72835757	cassetteExon	0.5	100	100	ENSMUST00000206378.2	ENSMUSG00000055239.11	Kcmf1	chr6	protein_coding	potassium channel modulatory factor 1
chr6	72827467	72835757	-	72820113	72835757	A3SS	0.33	50	50	ENSMUST00000206378.2	ENSMUSG00000055239.11	Kcmf1	chr6	protein_coding	potassium channel modulatory factor 1
chr6	72827467	72838741	-	72835896	72838741	A3SS&ES	0.5	50	50	ENSMUST00000206378.2	ENSMUSG00000055239.11	Kcmf1	chr6	protein_coding	potassium channel modulatory factor 1
chr6	72820113	72835757	-	72825490	72835757	3pMXE	0.33	50	50	ENSMUST00000203431.2	ENSMUSG00000055239.11	Kcmf1	chr6	protein_coding	potassium channel modulatory factor 1
chr6	72827467	72835757	-	72825490	72835757	A3SS	0.33	50	50	ENSMUST00000203431.2	ENSMUSG00000055239.11	Kcmf1	chr6	protein_coding	potassium channel modulatory factor 1
chr6	72825490	72826427	-	72825490	72835757	A5SS	0.5	50	50	ENSMUST00000203431.2	ENSMUSG00000055239.11	Kcmf1	chr6	protein_coding	potassium channel modulatory factor 1
chr6	73121154	73121884	-	73121154;73121798	73121643;73121884	ES	0.5	50	50	ENSMUST00000064948.13	ENSMUSG00000052861.14	Dnah6	chr6	protein_coding	dynein, axonemal, heavy chain 6
chr6	73115758	73115887	-	73115758	73119244	A5SS	0.5	50	50	ENSMUST00000064948.13	ENSMUSG00000052861.14	Dnah6	chr6	protein_coding	dynein, axonemal, heavy chain 6
chr6	73225736;73232032	73231943;73233154	+	73225736	73233154	cassetteExon	0.5	100	100	ENSMUST00000064740.9	ENSMUSG00000052738.15	Suclg1	chr6	protein_coding	succinate-CoA ligase, GDP-forming, alpha subunit
chr6	73233257	73234131	+	73233257	73237458	A3SS	0.33	50	50	ENSMUST00000064740.9	ENSMUSG00000052738.15	Suclg1	chr6	protein_coding	succinate-CoA ligase, GDP-forming, alpha subunit
chr6	73233257	73252260	+	73233257	73237458	A3SS&ES	0.33	50	50	ENSMUST00000064740.9	ENSMUSG00000052738.15	Suclg1	chr6	protein_coding	succinate-CoA ligase, GDP-forming, alpha subunit
chr6	73233257	73234131	+	73233257	73252260	A3SS	0.33	50	50	ENSMUST00000203632.2	ENSMUSG00000052738.15	Suclg1	chr6	protein_coding	succinate-CoA ligase, GDP-forming, alpha subunit
chr6	77822567	77956403	-	77822567;77891490	77891389;77956403	ES	0.33	50	50	ENSMUST00000161846.8	ENSMUSG00000063063.13	Ctnna2	chr6	protein_coding	catenin (cadherin associated protein), alpha 2
chr6	76859820;76879413	76879270;76892717	-	76859820	76892717	cassetteExon	0.5	100	100	ENSMUST00000161846.8	ENSMUSG00000063063.13	Ctnna2	chr6	protein_coding	catenin (cadherin associated protein), alpha 2
chr6	77577803	77582164	-	77120926	77582164	A3SS	0.5	50	50	ENSMUST00000161846.8	ENSMUSG00000063063.13	Ctnna2	chr6	protein_coding	catenin (cadherin associated protein), alpha 2
chr6	77903739	77956403	-	77891490	77956403	A3SS	0.33	50	50	ENSMUST00000161846.8	ENSMUSG00000063063.13	Ctnna2	chr6	protein_coding	catenin (cadherin associated protein), alpha 2
chr6	77903739	77956403	-	77822567	77956403	A3SS	0.33	50	50	ENSMUST00000159626.8	ENSMUSG00000063063.13	Ctnna2	chr6	protein_coding	catenin (cadherin associated protein), alpha 2
chr6	76859820	76892717	-	76859820	76879270	5pMXE	0.5	50	50	ENSMUST00000162991.2	ENSMUSG00000063063.13	Ctnna2	chr6	protein_coding	catenin (cadherin associated protein), alpha 2
chr6	76931857	76950690	-	76909510	76950690	A3SS	0.5	50	50	ENSMUST00000204527.2	ENSMUSG00000063063.13	Ctnna2	chr6	protein_coding	catenin (cadherin associated protein), alpha 2
chr6	76909510	76919191	-	76909510	76950690	A5SS	0.5	50	50	ENSMUST00000204527.2	ENSMUSG00000063063.13	Ctnna2	chr6	protein_coding	catenin (cadherin associated protein), alpha 2
chr6	77220070	77220486	+	77220205	77220486	A5SS	0.33	50	50	ENSMUST00000020400.5	ENSMUSG00000060780.3	Lrrtm1	chr6	protein_coding	leucine rich repeat transmembrane neuronal 1
chr6	77220209	77220486	+	77220205	77220486	A5SS	0.33	50	50	ENSMUST00000020400.5	ENSMUSG00000060780.3	Lrrtm1	chr6	protein_coding	leucine rich repeat transmembrane neuronal 1
chr6	77220070	77220486	+	77220209	77220486	A5SS	0.33	50	50	ENSMUST00000161677.2	ENSMUSG00000060780.3	Lrrtm1	chr6	protein_coding	leucine rich repeat transmembrane neuronal 1
chr6	78347893	78348183	+	78347689	78348183	A5SS	0.33	50	50	ENSMUST00000204873.3	ENSMUSG00000071356.8	Reg3b	chr6	protein_coding	regenerating islet-derived 3 beta
chr6	78347921	78348183	+	78347689	78348183	A5SS	0.33	50	50	ENSMUST00000204873.3	ENSMUSG00000071356.8	Reg3b	chr6	protein_coding	regenerating islet-derived 3 beta
chr6	78347921	78348183	+	78347893	78348183	A5SS	0.33	50	50	ENSMUST00000096904.6	ENSMUSG00000071356.8	Reg3b	chr6	protein_coding	regenerating islet-derived 3 beta
chr6	78353508	78354405	-	78353508;78354230	78354093;78354405	ES	0.5	50	50	ENSMUST00000089667.8	ENSMUSG00000068341.9	Reg3d	chr6	protein_coding	regenerating islet-derived 3 delta
chr6	78382162	78382450	+	78372859	78382450	A5SS	0.5	50	50	ENSMUST00000203657.3	ENSMUSG00000023140.5	Reg2	chr6	protein_coding	regenerating islet-derived 2
chr6	78399774	78403268	+	78399774;78402990	78402913;78403268	ES	0.5	50	50	ENSMUST00000204687.3	ENSMUSG00000059654.8	Reg1	chr6	protein_coding	regenerating islet-derived 1
chr6	78399774	78403268	+	78402990	78403268	5pMXE	0.5	50	50	ENSMUST00000079926.6	ENSMUSG00000059654.8	Reg1	chr6	protein_coding	regenerating islet-derived 1
chr6	79996169;79996689	79996537;79998597	+	79996169	79998597	cassetteExon	0.5	100	100	ENSMUST00000147663.8	ENSMUSG00000052581.14	Lrrtm4	chr6	protein_coding	leucine rich repeat transmembrane neuronal 4
chr6	79996169;79996689	79996607;79998597	+	79996169	79998597	cassetteExon	0.5	100	100	ENSMUST00000147663.8	ENSMUSG00000052581.14	Lrrtm4	chr6	protein_coding	leucine rich repeat transmembrane neuronal 4
chr6	79996169;79996689	79996626;79998597	+	79996169	79998597	cassetteExon	0.5	100	100	ENSMUST00000147663.8	ENSMUSG00000052581.14	Lrrtm4	chr6	protein_coding	leucine rich repeat transmembrane neuronal 4
chr6	79996169	79996537	+	79996169	79996626	A3SS	0.25	50	50	ENSMUST00000128718.8	ENSMUSG00000052581.14	Lrrtm4	chr6	protein_coding	leucine rich repeat transmembrane neuronal 4
chr6	79996169	79996607	+	79996169	79996626	A3SS	0.25	50	50	ENSMUST00000128718.8	ENSMUSG00000052581.14	Lrrtm4	chr6	protein_coding	leucine rich repeat transmembrane neuronal 4
chr6	79996169	79996607	+	79996169	79996537	A3SS	0.25	50	50	ENSMUST00000126005.8	ENSMUSG00000052581.14	Lrrtm4	chr6	protein_coding	leucine rich repeat transmembrane neuronal 4
chr6	79996169	79998597	+	79996689	79998597	5pMXE	0.5	50	50	ENSMUST00000145407.2	ENSMUSG00000052581.14	Lrrtm4	chr6	protein_coding	leucine rich repeat transmembrane neuronal 4
chr6	81930401	81934935	+	81930401;81933936	81933812;81934935	ES	0.5	50	50	ENSMUST00000043195.11	ENSMUSG00000035125.11	Gcfc2	chr6	protein_coding	GC-rich sequence DNA binding factor 2
chr6	81909892;81910784	81910709;81912887	+	81909892	81912887	cassetteExon	0.5	100	100	ENSMUST00000043195.11	ENSMUSG00000035125.11	Gcfc2	chr6	protein_coding	GC-rich sequence DNA binding factor 2
chr6	81920522	81921388	+	81920522	81921302	A3SS	0.5	50	50	ENSMUST00000043195.11	ENSMUSG00000035125.11	Gcfc2	chr6	protein_coding	GC-rich sequence DNA binding factor 2
chr6	81909892	81912887	+	81909892	81910709	3pMXE	0.5	50	50	ENSMUST00000147673.2	ENSMUSG00000035125.11	Gcfc2	chr6	protein_coding	GC-rich sequence DNA binding factor 2
chr6	81930401	81934935	+	81930401	81933812	3pMXE	0.5	50	50	ENSMUST00000129678.2	ENSMUSG00000035125.11	Gcfc2	chr6	protein_coding	GC-rich sequence DNA binding factor 2
chr6	81941338	81942534	-	81941338	81942688	A5SS	0.5	50	50	ENSMUST00000032124.9	ENSMUSG00000030045.11	Mrpl19	chr6	protein_coding	mitochondrial ribosomal protein L19
chr6	81968035	81968382	+	81961596	81968382	A5SS	0.5	50	50	ENSMUST00000204844.2	ENSMUSG00000107412.2	Gm20383	chr6	lncRNA	predicted gene, 20383
chr6	82018882	82048036	+	82018248	82048036	A5SS	0.33	50	50	ENSMUST00000150976.8	ENSMUSG00000035104.15	Eva1a	chr6	protein_coding	eva-1 homolog A (C. elegans)
chr6	82029427	82048036	+	82018248	82048036	A5SS	0.33	50	50	ENSMUST00000150976.8	ENSMUSG00000035104.15	Eva1a	chr6	protein_coding	eva-1 homolog A (C. elegans)
chr6	82018882	82021296	+	82018882	82048036	A3SS	0.5	50	50	ENSMUST00000042974.15	ENSMUSG00000035104.15	Eva1a	chr6	protein_coding	eva-1 homolog A (C. elegans)
chr6	82029427	82048036	+	82018882	82048036	A5SS	0.33	50	50	ENSMUST00000042974.15	ENSMUSG00000035104.15	Eva1a	chr6	protein_coding	eva-1 homolog A (C. elegans)
chr6	82379563	82379783	+	82379398	82379783	A5SS	0.5	50	50	ENSMUST00000205041.2	ENSMUSG00000030043.12	Tacr1	chr6	protein_coding	tachykinin receptor 1
chr6	82599106	82628418	-	82596119	82628418	A3SS	0.33	50	50	ENSMUST00000161309.8	ENSMUSG00000030042.16	Pole4	chr6	protein_coding	polymerase (DNA-directed), epsilon 4 (p12 subunit)
chr6	82625017	82628418	-	82596119	82628418	A3SS	0.33	50	50	ENSMUST00000161309.8	ENSMUSG00000030042.16	Pole4	chr6	protein_coding	polymerase (DNA-directed), epsilon 4 (p12 subunit)
chr6	82629148	82629366	-	82629148	82682164	A5SS	0.25	50	50	ENSMUST00000161309.8	ENSMUSG00000030042.16	Pole4	chr6	protein_coding	polymerase (DNA-directed), epsilon 4 (p12 subunit)
chr6	82629148	82629460	-	82629148	82682164	A5SS	0.25	50	50	ENSMUST00000161309.8	ENSMUSG00000030042.16	Pole4	chr6	protein_coding	polymerase (DNA-directed), epsilon 4 (p12 subunit)
chr6	82629148	82629605	-	82629148	82682164	A5SS	0.25	50	50	ENSMUST00000161309.8	ENSMUSG00000030042.16	Pole4	chr6	protein_coding	polymerase (DNA-directed), epsilon 4 (p12 subunit)
chr6	82625017	82628418	-	82599106	82628418	A3SS	0.33	50	50	ENSMUST00000160281.8	ENSMUSG00000030042.16	Pole4	chr6	protein_coding	polymerase (DNA-directed), epsilon 4 (p12 subunit)
chr6	82629148	82629366	-	82629148	82629605	A5SS	0.25	50	50	ENSMUST00000160281.8	ENSMUSG00000030042.16	Pole4	chr6	protein_coding	polymerase (DNA-directed), epsilon 4 (p12 subunit)
chr6	82629148	82629460	-	82629148	82629605	A5SS	0.25	50	50	ENSMUST00000160281.8	ENSMUSG00000030042.16	Pole4	chr6	protein_coding	polymerase (DNA-directed), epsilon 4 (p12 subunit)
chr6	82629148	82629366	-	82629148	82629460	A5SS	0.25	50	50	ENSMUST00000141138.8	ENSMUSG00000030042.16	Pole4	chr6	protein_coding	polymerase (DNA-directed), epsilon 4 (p12 subunit)
chr6	82737247	82749615	-	82737247	82750899	A5SS	0.33	50	50	ENSMUST00000000642.11	ENSMUSG00000000628.11	Hk2	chr6	protein_coding	hexokinase 2
chr6	82737247	82750244	-	82737247	82750899	A5SS	0.33	50	50	ENSMUST00000000642.11	ENSMUSG00000000628.11	Hk2	chr6	protein_coding	hexokinase 2
chr6	82737247	82749615	-	82737247	82750244	A5SS	0.33	50	50	ENSMUST00000170833.2	ENSMUSG00000000628.11	Hk2	chr6	protein_coding	hexokinase 2
chr6	82812915	82814341	+	82812915	82814046	3pMXE	0.5	50	50	ENSMUST00000204063.3	ENSMUSG00000108015.4	Gm32591	chr6	lncRNA	predicted gene, 32591
chr6	82808512	82812816	+	82804127	82812816	A5SS	0.5	50	50	ENSMUST00000204063.3	ENSMUSG00000108015.4	Gm32591	chr6	lncRNA	predicted gene, 32591
chr6	82812915	82814341	+	82812915;82814243	82814046;82814341	ES	0.33	50	50	ENSMUST00000204725.3	ENSMUSG00000108015.4	Gm32591	chr6	lncRNA	predicted gene, 32591
chr6	82814239	82814341	+	82814243	82814341	A5SS	0.33	50	50	ENSMUST00000204725.3	ENSMUSG00000108015.4	Gm32591	chr6	lncRNA	predicted gene, 32591
chr6	82812915;82814239	82814046;82814341	+	82812915	82814341	cassetteExon	0.5	100	100	ENSMUST00000208679.2	ENSMUSG00000108015.4	Gm32591	chr6	lncRNA	predicted gene, 32591
chr6	82858314	82858750	-	82858290	82858750	A3SS	0.5	50	50	ENSMUST00000186147.7	ENSMUSG00000100291.7	2310069B03Rik	chr6	lncRNA	RIKEN cDNA 2310069B03 gene
chr6	82858314	82858705	-	82858314	82858750	A5SS	0.5	50	50	ENSMUST00000186119.7	ENSMUSG00000100291.7	2310069B03Rik	chr6	lncRNA	RIKEN cDNA 2310069B03 gene
chr6	82874121	82882125	-	82874121	82874398	5pMXE	0.33	50	50	ENSMUST00000208872.2	ENSMUSG00000109076.2	Gm45145	chr6	lncRNA	predicted gene 45145
chr6	82874121	82874438	-	82874121	82874398	A5SS	0.33	50	50	ENSMUST00000208872.2	ENSMUSG00000109076.2	Gm45145	chr6	lncRNA	predicted gene 45145
chr6	82874121	82882125	-	82874121	82874438	5pMXE	0.33	50	50	ENSMUST00000207452.2	ENSMUSG00000109076.2	Gm45145	chr6	lncRNA	predicted gene 45145
chr6	82907972	82912876	-	82907972;82912666	82912568;82912876	ES	0.5	50	50	ENSMUST00000000641.15	ENSMUSG00000000627.16	Sema4f	chr6	protein_coding	sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain
chr6	82914191	82916442	-	82914193	82916442	A3SS	0.5	50	50	ENSMUST00000000641.15	ENSMUSG00000000627.16	Sema4f	chr6	protein_coding	sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain
chr6	83003385	83006751	+	83003385;83005513	83005373;83006751	ES	0.5	50	50	ENSMUST00000113980.4	ENSMUSG00000030041.10	M1ap	chr6	protein_coding	meiosis 1 associated protein
chr6	83003385	83006751	+	83005513	83006751	5pMXE	0.5	50	50	ENSMUST00000144906.2	ENSMUSG00000030041.10	M1ap	chr6	protein_coding	meiosis 1 associated protein
chr6	83010045	83010352	-	83010047	83010352	A3SS	0.5	50	50	ENSMUST00000089651.6	ENSMUSG00000068335.7	Dok1	chr6	protein_coding	docking protein 1
chr6	83009041	83009286	-	83009041	83009212	A5SS	0.5	50	50	ENSMUST00000089651.6	ENSMUSG00000068335.7	Dok1	chr6	protein_coding	docking protein 1
chr6	83011270	83012436	+	83011270	83012561	A3SS	0.5	50	50	ENSMUST00000152679.8	ENSMUSG00000000693.11	Loxl3	chr6	protein_coding	lysyl oxidase-like 3
chr6	83015590	83021096	+	83015590	83024969	A3SS	0.5	50	50	ENSMUST00000000707.9	ENSMUSG00000000693.11	Loxl3	chr6	protein_coding	lysyl oxidase-like 3
chr6	83025739	83025850	+	83025739	83027289	A3SS	0.5	50	50	ENSMUST00000101257.4	ENSMUSG00000000693.11	Loxl3	chr6	protein_coding	lysyl oxidase-like 3
chr6	83027212	83027289	+	83025739	83027289	A5SS	0.5	50	50	ENSMUST00000101257.4	ENSMUSG00000000693.11	Loxl3	chr6	protein_coding	lysyl oxidase-like 3
chr6	83029523	83030019	-	83029523;83029784	83029679;83030019	ES	0.33	50	50	ENSMUST00000113962.8	ENSMUSG00000068329.13	Htra2	chr6	protein_coding	HtrA serine peptidase 2
chr6	83030798	83031812	-	83030798	83030902	5pMXE	0.5	50	50	ENSMUST00000113962.8	ENSMUSG00000068329.13	Htra2	chr6	protein_coding	HtrA serine peptidase 2
chr6	83028615;83028818	83028723;83029454	-	83028615	83029454	cassetteExon	0.5	100	100	ENSMUST00000113962.8	ENSMUSG00000068329.13	Htra2	chr6	protein_coding	HtrA serine peptidase 2
chr6	83030051;83030504	83030310;83030594	-	83030051	83030594	cassetteExon	0.5	100	100	ENSMUST00000113962.8	ENSMUSG00000068329.13	Htra2	chr6	protein_coding	HtrA serine peptidase 2
chr6	83029707	83030019	-	83029784	83030019	A3SS	0.33	50	50	ENSMUST00000113962.8	ENSMUSG00000068329.13	Htra2	chr6	protein_coding	HtrA serine peptidase 2
chr6	83029523	83029982	-	83029523	83029679	A5SS&ES	0.33	50	50	ENSMUST00000113962.8	ENSMUSG00000068329.13	Htra2	chr6	protein_coding	HtrA serine peptidase 2
chr6	83029523;83029707	83029679;83030019	-	83029523	83030019	cassetteExon	0.5	100	100	ENSMUST00000122955.8	ENSMUSG00000068329.13	Htra2	chr6	protein_coding	HtrA serine peptidase 2
chr6	83029523	83029982	-	83029523	83030019	A5SS	0.33	50	50	ENSMUST00000122955.8	ENSMUSG00000068329.13	Htra2	chr6	protein_coding	HtrA serine peptidase 2
chr6	83029523	83030019	-	83029523	83029679	A5SS	0.33	50	50	ENSMUST00000144058.4	ENSMUSG00000068329.13	Htra2	chr6	protein_coding	HtrA serine peptidase 2
chr6	83028615	83029454	-	83028818	83029454	3pMXE	0.5	50	50	ENSMUST00000150217.2	ENSMUSG00000068329.13	Htra2	chr6	protein_coding	HtrA serine peptidase 2
chr6	83030051	83030594	-	83030504	83030594	3pMXE	0.5	50	50	ENSMUST00000203339.2	ENSMUSG00000068329.13	Htra2	chr6	protein_coding	HtrA serine peptidase 2
chr6	83032029	83032487	+	83032029;83032260	83032110;83032487	ES	0.5	50	50	ENSMUST00000092618.9	ENSMUSG00000068328.10	Aup1	chr6	protein_coding	ancient ubiquitous protein 1
chr6	83034074	83034195	+	83034074	83034257	A3SS	0.5	50	50	ENSMUST00000092618.9	ENSMUSG00000068328.10	Aup1	chr6	protein_coding	ancient ubiquitous protein 1
chr6	83031994	83032110	+	83032029	83032110	A5SS	0.5	50	50	ENSMUST00000092618.9	ENSMUSG00000068328.10	Aup1	chr6	protein_coding	ancient ubiquitous protein 1
chr6	83032029	83032487	+	83032029	83032110	A3SS	0.5	50	50	ENSMUST00000204895.3	ENSMUSG00000068328.10	Aup1	chr6	protein_coding	ancient ubiquitous protein 1
chr6	83032029	83032487	+	83032260	83032487	A5SS&ES	0.5	50	50	ENSMUST00000204719.3	ENSMUSG00000068328.10	Aup1	chr6	protein_coding	ancient ubiquitous protein 1
chr6	83035120	83035472	+	83035120	83035411	A3SS	0.5	50	50	ENSMUST00000077502.5	ENSMUSG00000009145.7	Dqx1	chr6	protein_coding	DEAQ RNA-dependent ATPase
chr6	83055680	83055876	+	83055459	83055876	A5SS	0.5	50	50	ENSMUST00000176100.2	ENSMUSG00000069678.11	Pcgf1	chr6	protein_coding	polycomb group ring finger 1
chr6	83056936	83057061	+	83056936	83057035	A3SS	0.5	50	50	ENSMUST00000165164.9	ENSMUSG00000069678.11	Pcgf1	chr6	protein_coding	polycomb group ring finger 1
chr6	83056249;83056726	83056414;83056903	+	83056249	83056903	cassetteExon	0.5	100	100	ENSMUST00000176089.2	ENSMUSG00000069678.11	Pcgf1	chr6	protein_coding	polycomb group ring finger 1
chr6	83056249;83056726	83056415;83056903	+	83056249	83056903	cassetteExon	0.5	100	100	ENSMUST00000176089.2	ENSMUSG00000069678.11	Pcgf1	chr6	protein_coding	polycomb group ring finger 1
chr6	83056249	83056415	+	83056249	83056414	A3SS	0.5	50	50	ENSMUST00000204211.2	ENSMUSG00000069678.11	Pcgf1	chr6	protein_coding	polycomb group ring finger 1
chr6	83064435	83064664	+	83063603	83064664	A5SS	0.5	50	50	ENSMUST00000041265.4	ENSMUSG00000034968.4	Lbx2	chr6	protein_coding	ladybird homeobox 2
chr6	83084171	83085865	-	83084171	83084724	A5SS&ES	0.5	50	50	ENSMUST00000125657.2	ENSMUSG00000087578.2	Ccdc142os	chr6	lncRNA	coiled-coil domain containing 142, opposite strand
chr6	83084787	83085708	-	83084787	83085792	A5SS	0.5	50	50	ENSMUST00000125657.2	ENSMUSG00000087578.2	Ccdc142os	chr6	lncRNA	coiled-coil domain containing 142, opposite strand
chr6	83084171;83084895	83084724;83085865	-	83084171	83085865	cassetteExon	0.5	100	100	ENSMUST00000141639.2	ENSMUSG00000087578.2	Ccdc142os	chr6	lncRNA	coiled-coil domain containing 142, opposite strand
chr6	83097268	83098184	-	83097268;83097857	83097753;83098184	ES	0.25	50	50	ENSMUST00000032111.11	ENSMUSG00000030035.15	Wbp1	chr6	protein_coding	WW domain binding protein 1
chr6	83096988	83097166	-	83097025	83097166	A3SS	0.5	50	50	ENSMUST00000032111.11	ENSMUSG00000030035.15	Wbp1	chr6	protein_coding	WW domain binding protein 1
chr6	83097854	83098184	-	83097857	83098184	A3SS	0.25	50	50	ENSMUST00000032111.11	ENSMUSG00000030035.15	Wbp1	chr6	protein_coding	WW domain binding protein 1
chr6	83097025	83097139	-	83097025	83097166	A5SS	0.33	50	50	ENSMUST00000032111.11	ENSMUSG00000030035.15	Wbp1	chr6	protein_coding	WW domain binding protein 1
chr6	83097025	83098184	-	83097025;83097268	83097166;83098184	ES	0.25	50	50	ENSMUST00000113936.10	ENSMUSG00000030035.15	Wbp1	chr6	protein_coding	WW domain binding protein 1
chr6	83097268;83097854	83097753;83098184	-	83097268	83098184	cassetteExon	0.5	100	100	ENSMUST00000113936.10	ENSMUSG00000030035.15	Wbp1	chr6	protein_coding	WW domain binding protein 1
chr6	83097025	83098184	-	83097025;83097857	83097166;83098184	ES	0.25	50	50	ENSMUST00000131939.6	ENSMUSG00000030035.15	Wbp1	chr6	protein_coding	WW domain binding protein 1
chr6	83097268	83098184	-	83097857	83098184	A3SS	0.25	50	50	ENSMUST00000131939.6	ENSMUSG00000030035.15	Wbp1	chr6	protein_coding	WW domain binding protein 1
chr6	83097025	83098184	-	83097857	83098184	A3SS&ES	0.25	50	50	ENSMUST00000151393.7	ENSMUSG00000030035.15	Wbp1	chr6	protein_coding	WW domain binding protein 1
chr6	83097025	83098184	-	83097025	83097139	5pMXE	0.33	50	50	ENSMUST00000131936.3	ENSMUSG00000030035.15	Wbp1	chr6	protein_coding	WW domain binding protein 1
chr6	83097268	83098184	-	83097268	83097753	5pMXE	0.5	50	50	ENSMUST00000142493.2	ENSMUSG00000030035.15	Wbp1	chr6	protein_coding	WW domain binding protein 1
chr6	83097025;83097268	83097139;83098184	-	83097025	83098184	cassetteExon	0.5	100	100	ENSMUST00000123394.2	ENSMUSG00000030035.15	Wbp1	chr6	protein_coding	WW domain binding protein 1
chr6	83097854	83098184	-	83097025	83098184	A3SS	0.25	50	50	ENSMUST00000123394.2	ENSMUSG00000030035.15	Wbp1	chr6	protein_coding	WW domain binding protein 1
chr6	83101406	83101992	-	83101406;83101758	83101566;83101992	ES	0.5	50	50	ENSMUST00000113935.9	ENSMUSG00000030034.13	Ino80b	chr6	protein_coding	INO80 complex subunit B
chr6	83101406	83101992	-	83101406	83101566	5pMXE	0.5	50	50	ENSMUST00000203085.2	ENSMUSG00000030034.13	Ino80b	chr6	protein_coding	INO80 complex subunit B
chr6	83113040	83122912	+	83112566	83122912	A5SS	0.2	50	50	ENSMUST00000135490.8	ENSMUSG00000034930.17	Rtkn	chr6	protein_coding	rhotekin
chr6	83115227	83122912	+	83112566	83122912	A5SS	0.2	50	50	ENSMUST00000135490.8	ENSMUSG00000034930.17	Rtkn	chr6	protein_coding	rhotekin
chr6	83119542	83122912	+	83112566	83122912	A5SS	0.2	50	50	ENSMUST00000135490.8	ENSMUSG00000034930.17	Rtkn	chr6	protein_coding	rhotekin
chr6	83119692	83122912	+	83112566	83122912	A5SS	0.2	50	50	ENSMUST00000135490.8	ENSMUSG00000034930.17	Rtkn	chr6	protein_coding	rhotekin
chr6	83128322	83128681	+	83128322	83128867	A3SS	0.5	50	50	ENSMUST00000065512.11	ENSMUSG00000034930.17	Rtkn	chr6	protein_coding	rhotekin
chr6	83115227	83122912	+	83113040	83122912	A5SS	0.2	50	50	ENSMUST00000065512.11	ENSMUSG00000034930.17	Rtkn	chr6	protein_coding	rhotekin
chr6	83119542	83122912	+	83113040	83122912	A5SS	0.2	50	50	ENSMUST00000065512.11	ENSMUSG00000034930.17	Rtkn	chr6	protein_coding	rhotekin
chr6	83119692	83122912	+	83113040	83122912	A5SS	0.2	50	50	ENSMUST00000065512.11	ENSMUSG00000034930.17	Rtkn	chr6	protein_coding	rhotekin
chr6	83119542	83122912	+	83115227	83122912	A5SS	0.33	50	50	ENSMUST00000121093.8	ENSMUSG00000034930.17	Rtkn	chr6	protein_coding	rhotekin
chr6	83119692	83122912	+	83115227	83122912	A5SS	0.33	50	50	ENSMUST00000121093.8	ENSMUSG00000034930.17	Rtkn	chr6	protein_coding	rhotekin
chr6	83119692	83122912	+	83119542	83122912	A5SS	0.2	50	50	ENSMUST00000130622.8	ENSMUSG00000034930.17	Rtkn	chr6	protein_coding	rhotekin
chr6	83132222	83132460	-	83132118	83132460	A3SS	0.5	50	50	ENSMUST00000153148.8	ENSMUSG00000030032.15	Wdr54	chr6	protein_coding	WD repeat domain 54
chr6	83132777	83133157	-	83132853	83133157	A3SS	0.5	50	50	ENSMUST00000153148.8	ENSMUSG00000030032.15	Wdr54	chr6	protein_coding	WD repeat domain 54
chr6	83133227	83133302	-	83133227	83133297	A5SS	0.5	50	50	ENSMUST00000125894.9	ENSMUSG00000030032.15	Wdr54	chr6	protein_coding	WD repeat domain 54
chr6	83173089;83174315	83174301;83174473	+	83173089	83174473	cassetteExon	0.5	100	100	ENSMUST00000077407.12	ENSMUSG00000031865.17	Dctn1	chr6	protein_coding	dynactin 1
chr6	83160315	83160918	+	83160315	83166059	A3SS	0.5	50	50	ENSMUST00000077407.12	ENSMUSG00000031865.17	Dctn1	chr6	protein_coding	dynactin 1
chr6	83143050	83159506	+	83142976	83159506	A5SS	0.25	50	50	ENSMUST00000077407.12	ENSMUSG00000031865.17	Dctn1	chr6	protein_coding	dynactin 1
chr6	83156793	83159506	+	83142976	83159506	A5SS	0.25	50	50	ENSMUST00000077407.12	ENSMUSG00000031865.17	Dctn1	chr6	protein_coding	dynactin 1
chr6	83156887	83159506	+	83142976	83159506	A5SS	0.25	50	50	ENSMUST00000077407.12	ENSMUSG00000031865.17	Dctn1	chr6	protein_coding	dynactin 1
chr6	83164766	83166059	+	83160315	83166059	A5SS	0.5	50	50	ENSMUST00000077407.12	ENSMUSG00000031865.17	Dctn1	chr6	protein_coding	dynactin 1
chr6	83156793	83159506	+	83143050	83159506	A5SS	0.25	50	50	ENSMUST00000130212.8	ENSMUSG00000031865.17	Dctn1	chr6	protein_coding	dynactin 1
chr6	83156887	83159506	+	83143050	83159506	A5SS	0.25	50	50	ENSMUST00000130212.8	ENSMUSG00000031865.17	Dctn1	chr6	protein_coding	dynactin 1
chr6	83156793	83159506	+	83156887	83159506	A5SS	0.25	50	50	ENSMUST00000113919.10	ENSMUSG00000031865.17	Dctn1	chr6	protein_coding	dynactin 1
chr6	83148862	83149490	-	83143620	83149490	A3SS	0.5	50	50	ENSMUST00000154953.2	ENSMUSG00000085782.3	Gm15624	chr6	lncRNA	predicted gene 15624
chr6	83257146	83265272	+	83257146;83262918	83262805;83265272	ES	0.33	50	50	ENSMUST00000113900.8	ENSMUSG00000068323.13	Slc4a5	chr6	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 5
chr6	83274365	83277453	+	83274365;83276492	83276408;83277453	ES	0.5	50	50	ENSMUST00000113900.8	ENSMUSG00000068323.13	Slc4a5	chr6	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 5
chr6	83214274	83217592	+	83203369	83217592	A5SS	0.33	50	50	ENSMUST00000113900.8	ENSMUSG00000068323.13	Slc4a5	chr6	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 5
chr6	83214744	83217592	+	83203369	83217592	A5SS	0.33	50	50	ENSMUST00000113900.8	ENSMUSG00000068323.13	Slc4a5	chr6	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 5
chr6	83264710	83265272	+	83262918	83265272	A5SS	0.33	50	50	ENSMUST00000113900.8	ENSMUSG00000068323.13	Slc4a5	chr6	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 5
chr6	83214744	83217592	+	83214274	83217592	A5SS	0.33	50	50	ENSMUST00000122897.2	ENSMUSG00000068323.13	Slc4a5	chr6	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 5
chr6	83264710	83265272	+	83257146	83265272	A5SS	0.33	50	50	ENSMUST00000141863.8	ENSMUSG00000068323.13	Slc4a5	chr6	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 5
chr6	83290528	83302697	-	83290528	83294411	5pMXE	0.5	50	50	ENSMUST00000005810.9	ENSMUSG00000005667.9	Mthfd2	chr6	protein_coding	methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase
chr6	83288916;83289827	83289728;83290344	-	83288916	83290344	cassetteExon	0.5	100	100	ENSMUST00000005810.9	ENSMUSG00000005667.9	Mthfd2	chr6	protein_coding	methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase
chr6	83303249;83304647	83304610;83306849	+	83303249	83306849	cassetteExon	0.5	100	100	ENSMUST00000055261.11	ENSMUSG00000043131.15	Mob1a	chr6	protein_coding	MOB kinase activator 1A
chr6	83309529	83311188	+	83309529	83311058	A3SS	0.5	50	50	ENSMUST00000055261.11	ENSMUSG00000043131.15	Mob1a	chr6	protein_coding	MOB kinase activator 1A
chr6	83303451	83306849	+	83303249	83306849	A5SS	0.33	50	50	ENSMUST00000055261.11	ENSMUSG00000043131.15	Mob1a	chr6	protein_coding	MOB kinase activator 1A
chr6	83307015	83315263	+	83307015	83309436	3pMXE	0.5	50	50	ENSMUST00000133045.7	ENSMUSG00000043131.15	Mob1a	chr6	protein_coding	MOB kinase activator 1A
chr6	83303451	83306849	+	83304647	83306849	A5SS&ES	0.33	50	50	ENSMUST00000133045.7	ENSMUSG00000043131.15	Mob1a	chr6	protein_coding	MOB kinase activator 1A
chr6	83311191	83315263	+	83307015	83315263	A5SS	0.5	50	50	ENSMUST00000038658.15	ENSMUSG00000043131.15	Mob1a	chr6	protein_coding	MOB kinase activator 1A
chr6	83326342	83328248	+	83326219	83328248	A5SS	0.33	50	50	ENSMUST00000122216.8	ENSMUSG00000045160.15	Bola3	chr6	protein_coding	bolA-like 3 (E. coli)
chr6	83326536	83328248	+	83326219	83328248	A5SS	0.33	50	50	ENSMUST00000122216.8	ENSMUSG00000045160.15	Bola3	chr6	protein_coding	bolA-like 3 (E. coli)
chr6	83329264	83330024	+	83328371	83330024	A5SS	0.5	50	50	ENSMUST00000122216.8	ENSMUSG00000045160.15	Bola3	chr6	protein_coding	bolA-like 3 (E. coli)
chr6	83330362	83335129	+	83330112	83335129	A5SS	0.5	50	50	ENSMUST00000122216.8	ENSMUSG00000045160.15	Bola3	chr6	protein_coding	bolA-like 3 (E. coli)
chr6	83326536	83328248	+	83326342	83328248	A5SS	0.33	50	50	ENSMUST00000120040.8	ENSMUSG00000045160.15	Bola3	chr6	protein_coding	bolA-like 3 (E. coli)
chr6	83326536	83327258	+	83326536	83328248	A3SS	0.5	50	50	ENSMUST00000136501.2	ENSMUSG00000045160.15	Bola3	chr6	protein_coding	bolA-like 3 (E. coli)
chr6	83418255	83431732	-	83418255	83418532	5pMXE	0.33	50	50	ENSMUST00000089622.11	ENSMUSG00000034832.16	Tet3	chr6	protein_coding	tet methylcytosine dioxygenase 3
chr6	83418255	83435989	-	83418255	83418532	5pMXE	0.33	50	50	ENSMUST00000089622.11	ENSMUSG00000034832.16	Tet3	chr6	protein_coding	tet methylcytosine dioxygenase 3
chr6	83375599	83379649	-	83363057	83379649	A3SS	0.5	50	50	ENSMUST00000089622.11	ENSMUSG00000034832.16	Tet3	chr6	protein_coding	tet methylcytosine dioxygenase 3
chr6	83418255	83431732	-	83418255	83435989	A5SS	0.33	50	50	ENSMUST00000190295.2	ENSMUSG00000034832.16	Tet3	chr6	protein_coding	tet methylcytosine dioxygenase 3
chr6	83419659	83421815	+	83419659	83424058	A3SS	0.5	50	50	ENSMUST00000063376.10	ENSMUSG00000051844.14	B230319C09Rik	chr6	lncRNA	RIKEN cDNA B230319C09 gene
chr6	83457418	83458329	-	83457418;83457924	83457825;83458329	ES	0.5	50	50	ENSMUST00000014698.10	ENSMUSG00000014554.14	Dguok	chr6	protein_coding	deoxyguanosine kinase
chr6	83467590	83483730	-	83467590;83473780	83473668;83483730	ES	0.5	50	50	ENSMUST00000014698.10	ENSMUSG00000014554.14	Dguok	chr6	protein_coding	deoxyguanosine kinase
chr6	83458444;83458820	83458760;83463966	-	83458444	83463966	cassetteExon	0.5	100	100	ENSMUST00000014698.10	ENSMUSG00000014554.14	Dguok	chr6	protein_coding	deoxyguanosine kinase
chr6	83467590	83470469	-	83467590	83473668	A5SS	0.33	50	50	ENSMUST00000014698.10	ENSMUSG00000014554.14	Dguok	chr6	protein_coding	deoxyguanosine kinase
chr6	83467590	83470469	-	83467590	83483730	A5SS	0.33	50	50	ENSMUST00000145455.8	ENSMUSG00000014554.14	Dguok	chr6	protein_coding	deoxyguanosine kinase
chr6	83457418	83458329	-	83457924	83458329	3pMXE	0.5	50	50	ENSMUST00000206397.2	ENSMUSG00000014554.14	Dguok	chr6	protein_coding	deoxyguanosine kinase
chr6	83499909	83500150	-	83499882	83500150	A3SS	0.5	50	50	ENSMUST00000075161.12	ENSMUSG00000059430.15	Actg2	chr6	protein_coding	actin, gamma 2, smooth muscle, enteric
chr6	83504459	83504643	-	83504459	83513162	A5SS	0.33	50	50	ENSMUST00000075161.12	ENSMUSG00000059430.15	Actg2	chr6	protein_coding	actin, gamma 2, smooth muscle, enteric
chr6	83504459	83504940	-	83504459	83513162	A5SS	0.33	50	50	ENSMUST00000075161.12	ENSMUSG00000059430.15	Actg2	chr6	protein_coding	actin, gamma 2, smooth muscle, enteric
chr6	83504459	83504643	-	83504459	83504940	A5SS	0.33	50	50	ENSMUST00000121731.8	ENSMUSG00000059430.15	Actg2	chr6	protein_coding	actin, gamma 2, smooth muscle, enteric
chr6	83547501	83548755	-	83547501	83549393	A5SS	0.33	50	50	ENSMUST00000205648.2	ENSMUSG00000006906.11	Stambp	chr6	protein_coding	STAM binding protein
chr6	83547501	83549324	-	83547501	83549393	A5SS	0.33	50	50	ENSMUST00000205648.2	ENSMUSG00000006906.11	Stambp	chr6	protein_coding	STAM binding protein
chr6	83547501	83548755	-	83547501	83549324	A5SS	0.33	50	50	ENSMUST00000206400.2	ENSMUSG00000006906.11	Stambp	chr6	protein_coding	STAM binding protein
chr6	83681002	83687716	-	83674050	83687716	A3SS	0.5	50	50	ENSMUST00000123402.2	ENSMUSG00000085794.6	Vax2os	chr6	lncRNA	ventral anterior homeobox 2, opposite strand
chr6	83679627	83680171	-	83679627	83680120	A5SS	0.5	50	50	ENSMUST00000150233.3	ENSMUSG00000085794.6	Vax2os	chr6	lncRNA	ventral anterior homeobox 2, opposite strand
chr6	83726891;83728867	83728832;83729089	+	83726891	83729089	cassetteExon	0.5	100	100	ENSMUST00000006431.8	ENSMUSG00000006269.8	Atp6v1b1	chr6	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit B1
chr6	83726891	83727317	+	83726891	83729089	A3SS	0.33	50	50	ENSMUST00000006431.8	ENSMUSG00000006269.8	Atp6v1b1	chr6	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit B1
chr6	83726891	83728832	+	83726891	83727317	3pMXE	0.33	50	50	ENSMUST00000205867.2	ENSMUSG00000006269.8	Atp6v1b1	chr6	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit B1
chr6	83739042	83739584	-	83739042	83739447	5pMXE	0.5	50	50	ENSMUST00000189129.6	ENSMUSG00000099354.7	1700124L16Rik	chr6	lncRNA	RIKEN cDNA 1700124L16 gene
chr6	83740012	83740544	+	83740263	83740544	A5SS&ES	0.5	50	50	ENSMUST00000014891.5	ENSMUSG00000014747.7	Ankrd53	chr6	protein_coding	ankyrin repeat domain 53
chr6	83777340	83778480	+	83777340;83778170	83778073;83778480	ES	0.5	50	50	ENSMUST00000037376.14	ENSMUSG00000034744.14	Nagk	chr6	protein_coding	N-acetylglucosamine kinase
chr6	83775079	83775465	+	83775079	83775526	A3SS	0.5	50	50	ENSMUST00000037376.14	ENSMUSG00000034744.14	Nagk	chr6	protein_coding	N-acetylglucosamine kinase
chr6	83777340	83778009	+	83777340	83778073	A3SS	0.33	50	50	ENSMUST00000037376.14	ENSMUSG00000034744.14	Nagk	chr6	protein_coding	N-acetylglucosamine kinase
chr6	83772230	83773889	+	83772264	83773889	A5SS	0.33	50	50	ENSMUST00000037376.14	ENSMUSG00000034744.14	Nagk	chr6	protein_coding	N-acetylglucosamine kinase
chr6	83772356	83773889	+	83772264	83773889	A5SS	0.33	50	50	ENSMUST00000037376.14	ENSMUSG00000034744.14	Nagk	chr6	protein_coding	N-acetylglucosamine kinase
chr6	83772356	83773889	+	83772230	83773889	A5SS	0.33	50	50	ENSMUST00000113851.8	ENSMUSG00000034744.14	Nagk	chr6	protein_coding	N-acetylglucosamine kinase
chr6	83777340;83778170	83778009;83778480	+	83777340	83778480	cassetteExon	0.5	100	100	ENSMUST00000113850.2	ENSMUSG00000034744.14	Nagk	chr6	protein_coding	N-acetylglucosamine kinase
chr6	83777340	83778480	+	83777340	83778009	3pMXE	0.33	50	50	ENSMUST00000141611.2	ENSMUSG00000034744.14	Nagk	chr6	protein_coding	N-acetylglucosamine kinase
chr6	83844224	83911931	+	83844224	83905635	3pMXE	0.5	50	50	ENSMUST00000204415.2	ENSMUSG00000030016.15	Zfp638	chr6	protein_coding	zinc finger protein 638
chr6	83891461	83905635	+	83844224	83905635	A5SS	0.33	50	50	ENSMUST00000204415.2	ENSMUSG00000030016.15	Zfp638	chr6	protein_coding	zinc finger protein 638
chr6	83891471	83905635	+	83844224	83905635	A5SS	0.33	50	50	ENSMUST00000204415.2	ENSMUSG00000030016.15	Zfp638	chr6	protein_coding	zinc finger protein 638
chr6	83891461	83911931	+	83844224	83911931	A5SS	0.33	50	50	ENSMUST00000203273.3	ENSMUSG00000030016.15	Zfp638	chr6	protein_coding	zinc finger protein 638
chr6	83907147	83911931	+	83844224	83911931	A5SS	0.33	50	50	ENSMUST00000203273.3	ENSMUSG00000030016.15	Zfp638	chr6	protein_coding	zinc finger protein 638
chr6	83931743	83934491	+	83931743;83933744	83933676;83934491	ES	0.5	50	50	ENSMUST00000204751.3	ENSMUSG00000030016.15	Zfp638	chr6	protein_coding	zinc finger protein 638
chr6	83956891;83958767	83958666;83960958	+	83956891	83960958	cassetteExon	0.5	100	100	ENSMUST00000204751.3	ENSMUSG00000030016.15	Zfp638	chr6	protein_coding	zinc finger protein 638
chr6	83891461	83905635	+	83891471	83905635	A5SS	0.33	50	50	ENSMUST00000204751.3	ENSMUSG00000030016.15	Zfp638	chr6	protein_coding	zinc finger protein 638
chr6	83891461	83911931	+	83907147	83911931	A5SS&ES	0.5	50	50	ENSMUST00000204751.3	ENSMUSG00000030016.15	Zfp638	chr6	protein_coding	zinc finger protein 638
chr6	83953332	83960958	+	83956891	83960958	A5SS&ES	0.33	50	50	ENSMUST00000204751.3	ENSMUSG00000030016.15	Zfp638	chr6	protein_coding	zinc finger protein 638
chr6	83891461	83911931	+	83891461	83905635	3pMXE	0.5	50	50	ENSMUST00000204580.3	ENSMUSG00000030016.15	Zfp638	chr6	protein_coding	zinc finger protein 638
chr6	83891461	83911931	+	83891461;83907147	83905635;83911931	ES	0.5	50	50	ENSMUST00000204202.3	ENSMUSG00000030016.15	Zfp638	chr6	protein_coding	zinc finger protein 638
chr6	83931743	83934491	+	83931743	83933676	3pMXE	0.25	50	50	ENSMUST00000204202.3	ENSMUSG00000030016.15	Zfp638	chr6	protein_coding	zinc finger protein 638
chr6	83931743	83935166	+	83931743	83933676	3pMXE	0.25	50	50	ENSMUST00000204202.3	ENSMUSG00000030016.15	Zfp638	chr6	protein_coding	zinc finger protein 638
chr6	83931743	83936913	+	83931743	83933676	3pMXE	0.25	50	50	ENSMUST00000204202.3	ENSMUSG00000030016.15	Zfp638	chr6	protein_coding	zinc finger protein 638
chr6	83931743	83936913	+	83931743;83935234	83935166;83936913	ES	0.5	50	50	ENSMUST00000203455.3	ENSMUSG00000030016.15	Zfp638	chr6	protein_coding	zinc finger protein 638
chr6	83931743;83934574	83934491;83935166	+	83931743	83935166	cassetteExon	0.5	100	100	ENSMUST00000203455.3	ENSMUSG00000030016.15	Zfp638	chr6	protein_coding	zinc finger protein 638
chr6	83953332	83960958	+	83958767	83960958	A5SS&ES	0.33	50	50	ENSMUST00000113836.6	ENSMUSG00000030016.15	Zfp638	chr6	protein_coding	zinc finger protein 638
chr6	83956891	83960958	+	83958767	83960958	A5SS&ES	0.33	50	50	ENSMUST00000113836.6	ENSMUSG00000030016.15	Zfp638	chr6	protein_coding	zinc finger protein 638
chr6	83953332	83958666	+	83953332;83956891	83956829;83958666	ES	0.5	50	50	ENSMUST00000113835.10	ENSMUSG00000030016.15	Zfp638	chr6	protein_coding	zinc finger protein 638
chr6	83953332	83958666	+	83956891	83958666	A5SS&ES	0.5	50	50	ENSMUST00000032088.14	ENSMUSG00000030016.15	Zfp638	chr6	protein_coding	zinc finger protein 638
chr6	83953332	83960958	+	83953332;83958767	83958666;83960958	ES	0.33	50	50	ENSMUST00000203324.3	ENSMUSG00000030016.15	Zfp638	chr6	protein_coding	zinc finger protein 638
chr6	83953332;83956891	83956829;83960958	+	83953332;83958767	83958666;83960958	MXE	0.5	100	100	ENSMUST00000203324.3	ENSMUSG00000030016.15	Zfp638	chr6	protein_coding	zinc finger protein 638
chr6	83953332;83956891	83956829;83960958	+	83953332	83960958	cassetteExon	0.5	100	100	ENSMUST00000203891.3	ENSMUSG00000030016.15	Zfp638	chr6	protein_coding	zinc finger protein 638
chr6	83931743	83934491	+	83931743	83936913	A3SS	0.25	50	50	ENSMUST00000205166.2	ENSMUSG00000030016.15	Zfp638	chr6	protein_coding	zinc finger protein 638
chr6	83956891	83960958	+	83956891	83958666	3pMXE	0.5	50	50	ENSMUST00000203056.2	ENSMUSG00000030016.15	Zfp638	chr6	protein_coding	zinc finger protein 638
chr6	84064856	84074690	+	84064856;84073500	84073459;84074690	ES	0.5	50	50	ENSMUST00000113821.8	ENSMUSG00000033788.16	Dysf	chr6	protein_coding	dysferlin
chr6	84117668	84126657	+	84117668;84118934	84118905;84126657	ES	0.33	50	50	ENSMUST00000113821.8	ENSMUSG00000033788.16	Dysf	chr6	protein_coding	dysferlin
chr6	84040417;84041545	84041453;84041858	+	84040417	84041858	cassetteExon	0.5	100	100	ENSMUST00000113821.8	ENSMUSG00000033788.16	Dysf	chr6	protein_coding	dysferlin
chr6	84129391;84134183	84134121;84156654	+	84129391	84156654	cassetteExon	0.5	100	100	ENSMUST00000113821.8	ENSMUSG00000033788.16	Dysf	chr6	protein_coding	dysferlin
chr6	83996590	84014216	+	83985984	84014216	A5SS	0.5	50	50	ENSMUST00000113821.8	ENSMUSG00000033788.16	Dysf	chr6	protein_coding	dysferlin
chr6	84082473	84083792	+	84078951	84083792	A5SS	0.33	50	50	ENSMUST00000113821.8	ENSMUSG00000033788.16	Dysf	chr6	protein_coding	dysferlin
chr6	84083679	84083792	+	84078951	84083792	A5SS	0.33	50	50	ENSMUST00000113821.8	ENSMUSG00000033788.16	Dysf	chr6	protein_coding	dysferlin
chr6	84123769	84126657	+	84118934	84126657	A5SS	0.33	50	50	ENSMUST00000113821.8	ENSMUSG00000033788.16	Dysf	chr6	protein_coding	dysferlin
chr6	84187620	84187775	+	84184222	84187775	A5SS	0.5	50	50	ENSMUST00000113821.8	ENSMUSG00000033788.16	Dysf	chr6	protein_coding	dysferlin
chr6	84123769	84126657	+	84117668	84126657	A5SS	0.33	50	50	ENSMUST00000203803.3	ENSMUSG00000033788.16	Dysf	chr6	protein_coding	dysferlin
chr6	84083679	84083792	+	84082473	84083792	A5SS	0.33	50	50	ENSMUST00000127459.8	ENSMUSG00000033788.16	Dysf	chr6	protein_coding	dysferlin
chr6	84561456	84564784	-	84561456	84564563	5pMXE	0.5	50	50	ENSMUST00000205228.3	ENSMUSG00000063415.13	Cyp26b1	chr6	protein_coding	cytochrome P450, family 26, subfamily b, polypeptide 1
chr6	84554186	84564784	-	84554186;84561456	84561232;84564784	ES	0.5	50	50	ENSMUST00000204146.3	ENSMUSG00000063415.13	Cyp26b1	chr6	protein_coding	cytochrome P450, family 26, subfamily b, polypeptide 1
chr6	84565175	84570771	-	84565175	84570622	5pMXE	0.5	50	50	ENSMUST00000077705.6	ENSMUSG00000063415.13	Cyp26b1	chr6	protein_coding	cytochrome P450, family 26, subfamily b, polypeptide 1
chr6	84982018	85046278	-	84982018;84988465	84988300;85046278	ES	0.5	50	50	ENSMUST00000160197.6	ENSMUSG00000033769.17	Exoc6b	chr6	protein_coding	exocyst complex component 6B
chr6	84922674	84966307	-	84885271	84966307	A3SS	0.5	50	50	ENSMUST00000160197.6	ENSMUSG00000033769.17	Exoc6b	chr6	protein_coding	exocyst complex component 6B
chr6	85113913	85114421	-	85114095	85114421	A3SS	0.5	50	50	ENSMUST00000204757.3	ENSMUSG00000033735.10	Spr	chr6	protein_coding	sepiapterin reductase
chr6	85113913;85114095	85114043;85114421	-	85113913	85114421	cassetteExon	0.5	100	100	ENSMUST00000174769.2	ENSMUSG00000033735.10	Spr	chr6	protein_coding	sepiapterin reductase
chr6	85132350	85132661	+	85132301	85132661	A5SS	0.5	50	50	ENSMUST00000089584.7	ENSMUSG00000068303.7	Spr-ps1	chr6	transcribed_unprocessed_pseudogene	sepiapterin reductase pseudogene 1
chr6	85211605	85211745	-	85206293	85211745	A3SS	0.5	50	50	ENSMUST00000045846.12	ENSMUSG00000033720.13	Sfxn5	chr6	protein_coding	sideroflexin 5
chr6	85272148	85276522	-	85266770	85276522	A3SS	0.33	50	50	ENSMUST00000045846.12	ENSMUSG00000033720.13	Sfxn5	chr6	protein_coding	sideroflexin 5
chr6	85276316	85276522	-	85266770	85276522	A3SS	0.33	50	50	ENSMUST00000045846.12	ENSMUSG00000033720.13	Sfxn5	chr6	protein_coding	sideroflexin 5
chr6	85295951	85296504	-	85276599	85296504	A3SS	0.5	50	50	ENSMUST00000045846.12	ENSMUSG00000033720.13	Sfxn5	chr6	protein_coding	sideroflexin 5
chr6	85206293	85211740	-	85206293	85211745	A5SS	0.5	50	50	ENSMUST00000045846.12	ENSMUSG00000033720.13	Sfxn5	chr6	protein_coding	sideroflexin 5
chr6	85233415	85241621	-	85233415	85244854	A5SS	0.5	50	50	ENSMUST00000045846.12	ENSMUSG00000033720.13	Sfxn5	chr6	protein_coding	sideroflexin 5
chr6	85296572	85297286	-	85296572	85310290	A5SS	0.33	50	50	ENSMUST00000045846.12	ENSMUSG00000033720.13	Sfxn5	chr6	protein_coding	sideroflexin 5
chr6	85296572	85309262	-	85296572	85310290	A5SS	0.33	50	50	ENSMUST00000045846.12	ENSMUSG00000033720.13	Sfxn5	chr6	protein_coding	sideroflexin 5
chr6	85276316	85276522	-	85272148	85276522	A3SS	0.33	50	50	ENSMUST00000149362.8	ENSMUSG00000033720.13	Sfxn5	chr6	protein_coding	sideroflexin 5
chr6	85296572	85309262	-	85296572	85297286	5pMXE	0.33	50	50	ENSMUST00000138489.2	ENSMUSG00000033720.13	Sfxn5	chr6	protein_coding	sideroflexin 5
chr6	85319343	85324762	-	85314652	85324762	A3SS	0.5	50	50	ENSMUST00000060837.10	ENSMUSG00000051343.12	Rab11fip5	chr6	protein_coding	RAB11 family interacting protein 5 (class I)
chr6	85314652	85317325	-	85314652	85324762	A5SS	0.5	50	50	ENSMUST00000060837.10	ENSMUSG00000051343.12	Rab11fip5	chr6	protein_coding	RAB11 family interacting protein 5 (class I)
chr6	85314652	85324762	-	85314652;85319343	85317325;85324762	ES	0.5	50	50	ENSMUST00000204087.2	ENSMUSG00000051343.12	Rab11fip5	chr6	protein_coding	RAB11 family interacting protein 5 (class I)
chr6	85401336	85404939	+	85401336;85402591	85402380;85404939	ES	0.5	50	50	ENSMUST00000089578.9	ENSMUSG00000068302.9	Noto	chr6	protein_coding	notochord homeobox
chr6	85418881	85419093	+	85418790	85419093	A5SS	0.5	50	50	ENSMUST00000045693.8	ENSMUSG00000033706.14	Smyd5	chr6	protein_coding	SET and MYND domain containing 5
chr6	85424279	85424918	-	85424279;85424670	85424503;85424918	ES	0.33	50	50	ENSMUST00000032080.9	ENSMUSG00000030008.10	Pradc1	chr6	protein_coding	protease-associated domain containing 1
chr6	85425027	85428095	-	85425027;85425573	85425473;85428095	ES	0.5	50	50	ENSMUST00000032080.9	ENSMUSG00000030008.10	Pradc1	chr6	protein_coding	protease-associated domain containing 1
chr6	85425573	85428739	-	85425573	85428095	5pMXE	0.5	50	50	ENSMUST00000032080.9	ENSMUSG00000030008.10	Pradc1	chr6	protein_coding	protease-associated domain containing 1
chr6	85424789	85424918	-	85424670	85424918	A3SS	0.33	50	50	ENSMUST00000032080.9	ENSMUSG00000030008.10	Pradc1	chr6	protein_coding	protease-associated domain containing 1
chr6	85425027	85428095	-	85425027	85425473	A5SS&ES	0.5	50	50	ENSMUST00000126805.8	ENSMUSG00000030008.10	Pradc1	chr6	protein_coding	protease-associated domain containing 1
chr6	85424279	85424918	-	85424670	85424918	A3SS	0.33	50	50	ENSMUST00000146086.8	ENSMUSG00000030008.10	Pradc1	chr6	protein_coding	protease-associated domain containing 1
chr6	85424279;85424789	85424503;85424918	-	85424279	85424918	cassetteExon	0.5	100	100	ENSMUST00000113770.2	ENSMUSG00000030008.10	Pradc1	chr6	protein_coding	protease-associated domain containing 1
chr6	85424279	85424918	-	85424789	85424918	A3SS	0.33	50	50	ENSMUST00000139875.8	ENSMUSG00000030008.10	Pradc1	chr6	protein_coding	protease-associated domain containing 1
chr6	85425027	85428095	-	85425573	85428095	A3SS	0.5	50	50	ENSMUST00000203934.2	ENSMUSG00000030008.10	Pradc1	chr6	protein_coding	protease-associated domain containing 1
chr6	85437030	85438490	+	85437030;85438152	85438027;85438490	ES	0.5	50	50	ENSMUST00000032078.9	ENSMUSG00000030007.9	Cct7	chr6	protein_coding	chaperonin containing Tcp1, subunit 7 (eta)
chr6	85439179	85442882	+	85439179;85441926	85441762;85442882	ES	0.5	50	50	ENSMUST00000032078.9	ENSMUSG00000030007.9	Cct7	chr6	protein_coding	chaperonin containing Tcp1, subunit 7 (eta)
chr6	85436250	85438069	+	85436250	85436924	A3SS&ES	0.5	50	50	ENSMUST00000032078.9	ENSMUSG00000030007.9	Cct7	chr6	protein_coding	chaperonin containing Tcp1, subunit 7 (eta)
chr6	85436250;85437030	85436924;85438490	+	85436250;85438152	85438069;85438490	MXE	0.5	100	100	ENSMUST00000204489.3	ENSMUSG00000030007.9	Cct7	chr6	protein_coding	chaperonin containing Tcp1, subunit 7 (eta)
chr6	85437030	85438490	+	85438152	85438490	5pMXE	0.5	50	50	ENSMUST00000205096.2	ENSMUSG00000030007.9	Cct7	chr6	protein_coding	chaperonin containing Tcp1, subunit 7 (eta)
chr6	85439179	85442882	+	85439179	85441762	3pMXE	0.5	50	50	ENSMUST00000205096.2	ENSMUSG00000030007.9	Cct7	chr6	protein_coding	chaperonin containing Tcp1, subunit 7 (eta)
chr6	85461845	85462903	-	85461845	85479685	A5SS	0.33	50	50	ENSMUST00000159062.8	ENSMUSG00000047013.16	Fbxo41	chr6	protein_coding	F-box protein 41
chr6	85461845	85479691	-	85461845	85479685	A5SS	0.33	50	50	ENSMUST00000159062.8	ENSMUSG00000047013.16	Fbxo41	chr6	protein_coding	F-box protein 41
chr6	85461845	85479691	-	85461845;85463077	85462903;85479691	ES	0.5	50	50	ENSMUST00000161078.8	ENSMUSG00000047013.16	Fbxo41	chr6	protein_coding	F-box protein 41
chr6	85587514	85587800	+	85586107	85587800	A5SS	0.5	50	50	ENSMUST00000072018.6	ENSMUSG00000063810.8	Alms1	chr6	protein_coding	ALMS1, centrosome and basal body associated
chr6	85739323	85739415	-	85738835	85739415	A3SS	0.5	50	50	ENSMUST00000050780.8	ENSMUSG00000051262.10	Nat8f3	chr6	protein_coding	N-acetyltransferase 8 (GCN5-related) family member 3
chr6	85769229	85773112	+	85757135	85773112	A5SS	0.5	50	50	ENSMUST00000161983.8	ENSMUSG00000090098.8	Alms1-ps2	chr6	transcribed_unprocessed_pseudogene	ALMS1, centrosome and basal body associated, pseudogene 2
chr6	85786219;85786709	85786583;85786801	-	85786219	85786801	cassetteExon	0.5	100	100	ENSMUST00000174143.2	ENSMUSG00000079495.3	Nat8f6	chr6	protein_coding	N-acetyltransferase 8 (GCN5-related) family member 6
chr6	85795032	85797607	-	85787022	85797607	A3SS	0.5	50	50	ENSMUST00000174143.2	ENSMUSG00000079495.3	Nat8f6	chr6	protein_coding	N-acetyltransferase 8 (GCN5-related) family member 6
chr6	85888002	85892192	-	85888002	85892516	A5SS	0.5	50	50	ENSMUST00000161198.4	ENSMUSG00000057103.12	Nat8f1	chr6	protein_coding	N-acetyltransferase 8 (GCN5-related) family member 1
chr6	85888962	85891454	+	85888962;85890462	85890378;85891454	ES	0.5	50	50	ENSMUST00000202142.4	ENSMUSG00000054226.14	Tprkb	chr6	protein_coding	Tp53rk binding protein
chr6	85891510	85892135	+	85891510	85892131	A3SS	0.5	50	50	ENSMUST00000202142.4	ENSMUSG00000054226.14	Tprkb	chr6	protein_coding	Tp53rk binding protein
chr6	85898493;85900198	85900115;85901342	+	85898493	85901342	cassetteExon	0.5	100	100	ENSMUST00000200680.4	ENSMUSG00000054226.14	Tprkb	chr6	protein_coding	Tp53rk binding protein
chr6	85888962	85890378	+	85888962	85898405	A3SS	0.33	50	50	ENSMUST00000200680.4	ENSMUSG00000054226.14	Tprkb	chr6	protein_coding	Tp53rk binding protein
chr6	85888962	85891454	+	85888962	85898405	A3SS	0.33	50	50	ENSMUST00000200680.4	ENSMUSG00000054226.14	Tprkb	chr6	protein_coding	Tp53rk binding protein
chr6	85901504	85904241	+	85901504	85904223	A3SS	0.5	50	50	ENSMUST00000200680.4	ENSMUSG00000054226.14	Tprkb	chr6	protein_coding	Tp53rk binding protein
chr6	85892349	85898405	+	85888962	85898405	A5SS	0.2	50	50	ENSMUST00000200680.4	ENSMUSG00000054226.14	Tprkb	chr6	protein_coding	Tp53rk binding protein
chr6	85892772	85898405	+	85888962	85898405	A5SS	0.2	50	50	ENSMUST00000200680.4	ENSMUSG00000054226.14	Tprkb	chr6	protein_coding	Tp53rk binding protein
chr6	85892772	85901342	+	85898493	85901342	A5SS&ES	0.33	50	50	ENSMUST00000200680.4	ENSMUSG00000054226.14	Tprkb	chr6	protein_coding	Tp53rk binding protein
chr6	85893089	85898405	+	85888962	85898405	A5SS	0.2	50	50	ENSMUST00000200680.4	ENSMUSG00000054226.14	Tprkb	chr6	protein_coding	Tp53rk binding protein
chr6	85897006	85898405	+	85888962	85898405	A5SS	0.2	50	50	ENSMUST00000200680.4	ENSMUSG00000054226.14	Tprkb	chr6	protein_coding	Tp53rk binding protein
chr6	85892349	85898405	+	85892349	85892468	3pMXE	0.5	50	50	ENSMUST00000201289.4	ENSMUSG00000054226.14	Tprkb	chr6	protein_coding	Tp53rk binding protein
chr6	85892349;85892772	85892468;85898405	+	85892349	85898405	cassetteExon	0.5	100	100	ENSMUST00000201217.4	ENSMUSG00000054226.14	Tprkb	chr6	protein_coding	Tp53rk binding protein
chr6	85892349;85892772	85892468;85901342	+	85892349;85898493	85898405;85901342	MXE	0.5	100	100	ENSMUST00000201217.4	ENSMUSG00000054226.14	Tprkb	chr6	protein_coding	Tp53rk binding protein
chr6	85893089	85898405	+	85892349	85898405	A5SS	0.2	50	50	ENSMUST00000201217.4	ENSMUSG00000054226.14	Tprkb	chr6	protein_coding	Tp53rk binding protein
chr6	85897006	85898405	+	85892349	85898405	A5SS	0.2	50	50	ENSMUST00000201217.4	ENSMUSG00000054226.14	Tprkb	chr6	protein_coding	Tp53rk binding protein
chr6	85892349	85898405	+	85892772	85898405	5pMXE	0.2	50	50	ENSMUST00000113751.8	ENSMUSG00000054226.14	Tprkb	chr6	protein_coding	Tp53rk binding protein
chr6	85892772	85901342	+	85892772;85898493	85898405;85901342	ES	0.33	50	50	ENSMUST00000113751.8	ENSMUSG00000054226.14	Tprkb	chr6	protein_coding	Tp53rk binding protein
chr6	85892772;85897006	85896899;85898405	+	85892772	85898405	cassetteExon	0.5	100	100	ENSMUST00000113751.8	ENSMUSG00000054226.14	Tprkb	chr6	protein_coding	Tp53rk binding protein
chr6	85893089	85898405	+	85892772	85898405	A5SS	0.2	50	50	ENSMUST00000113751.8	ENSMUSG00000054226.14	Tprkb	chr6	protein_coding	Tp53rk binding protein
chr6	85893089	85898405	+	85897006	85898405	A5SS&ES	0.33	50	50	ENSMUST00000113753.8	ENSMUSG00000054226.14	Tprkb	chr6	protein_coding	Tp53rk binding protein
chr6	85892772	85896899	+	85892772	85901342	A3SS	0.33	50	50	ENSMUST00000113752.8	ENSMUSG00000054226.14	Tprkb	chr6	protein_coding	Tp53rk binding protein
chr6	85900198	85901342	+	85892772	85901342	A5SS	0.33	50	50	ENSMUST00000113752.8	ENSMUSG00000054226.14	Tprkb	chr6	protein_coding	Tp53rk binding protein
chr6	85927075	85929287	-	85927075;85927542	85927496;85929287	ES	0.5	50	50	ENSMUST00000032071.13	ENSMUSG00000030002.16	Dusp11	chr6	protein_coding	dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)
chr6	85932382	85935566	-	85930476	85935566	A3SS	0.33	50	50	ENSMUST00000032071.13	ENSMUSG00000030002.16	Dusp11	chr6	protein_coding	dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)
chr6	85932386	85935566	-	85930476	85935566	A3SS	0.33	50	50	ENSMUST00000032071.13	ENSMUSG00000030002.16	Dusp11	chr6	protein_coding	dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)
chr6	85930476	85930819	-	85930476	85935566	A5SS	0.5	50	50	ENSMUST00000032071.13	ENSMUSG00000030002.16	Dusp11	chr6	protein_coding	dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)
chr6	85927075	85929287	-	85927075	85927496	5pMXE	0.5	50	50	ENSMUST00000137527.8	ENSMUSG00000030002.16	Dusp11	chr6	protein_coding	dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)
chr6	85932386	85935566	-	85932382	85935566	A3SS	0.33	50	50	ENSMUST00000151394.8	ENSMUSG00000030002.16	Dusp11	chr6	protein_coding	dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)
chr6	85994439	85995561	+	85993229	85995561	A5SS	0.5	50	50	ENSMUST00000201361.2	ENSMUSG00000030001.5	Figla	chr6	protein_coding	folliculogenesis specific basic helix-loop-helix
chr6	86005928	86059697	+	86005928	86059694	A3SS	0.5	50	50	ENSMUST00000203529.3	ENSMUSG00000030000.11	Add2	chr6	protein_coding	adducin 2 (beta)
chr6	86029320	86059694	+	86005928	86059694	A5SS	0.33	50	50	ENSMUST00000203529.3	ENSMUSG00000030000.11	Add2	chr6	protein_coding	adducin 2 (beta)
chr6	86055096	86059694	+	86005928	86059694	A5SS	0.33	50	50	ENSMUST00000203529.3	ENSMUSG00000030000.11	Add2	chr6	protein_coding	adducin 2 (beta)
chr6	86055096	86059697	+	86005928	86059697	A5SS	0.5	50	50	ENSMUST00000204059.3	ENSMUSG00000030000.11	Add2	chr6	protein_coding	adducin 2 (beta)
chr6	86055096	86059694	+	86029320	86059694	A5SS	0.33	50	50	ENSMUST00000203445.3	ENSMUSG00000030000.11	Add2	chr6	protein_coding	adducin 2 (beta)
chr6	86055096	86059697	+	86055096	86059694	A3SS	0.5	50	50	ENSMUST00000205034.3	ENSMUSG00000030000.11	Add2	chr6	protein_coding	adducin 2 (beta)
chr6	86075701	86078137	+	86075701	86086691	A3SS	0.5	50	50	ENSMUST00000203279.2	ENSMUSG00000030000.11	Add2	chr6	protein_coding	adducin 2 (beta)
chr6	86084968	86086691	+	86075701	86086691	A5SS	0.5	50	50	ENSMUST00000203279.2	ENSMUSG00000030000.11	Add2	chr6	protein_coding	adducin 2 (beta)
chr6	86172527	86185073	+	86172527	86206413	A3SS	0.5	50	50	ENSMUST00000032066.13	ENSMUSG00000029999.15	Tgfa	chr6	protein_coding	transforming growth factor alpha
chr6	86188714	86206413	+	86172527	86206413	A5SS	0.5	50	50	ENSMUST00000032066.13	ENSMUSG00000029999.15	Tgfa	chr6	protein_coding	transforming growth factor alpha
chr6	86240258	86246912	+	86240258	86248930	A3SS	0.5	50	50	ENSMUST00000192058.4	ENSMUSG00000029999.15	Tgfa	chr6	protein_coding	transforming growth factor alpha
chr6	86248471	86248930	+	86240258	86248930	A5SS	0.5	50	50	ENSMUST00000192058.4	ENSMUSG00000029999.15	Tgfa	chr6	protein_coding	transforming growth factor alpha
chr6	86343875	86345713	+	86343732	86345713	A5SS	0.5	50	50	ENSMUST00000071492.9	ENSMUSG00000057497.9	Fam136a	chr6	protein_coding	family with sequence similarity 136, member A
chr6	86348686	86352659	+	86348596	86352659	A5SS	0.33	50	50	ENSMUST00000089558.7	ENSMUSG00000057278.9	Snrpg	chr6	protein_coding	small nuclear ribonucleoprotein polypeptide G
chr6	86348975	86352659	+	86348596	86352659	A5SS	0.33	50	50	ENSMUST00000089558.7	ENSMUSG00000057278.9	Snrpg	chr6	protein_coding	small nuclear ribonucleoprotein polypeptide G
chr6	86348686	86352659	+	86348975	86352659	A5SS	0.33	50	50	ENSMUST00000204380.3	ENSMUSG00000057278.9	Snrpg	chr6	protein_coding	small nuclear ribonucleoprotein polypeptide G
chr6	86366353	86369119	-	86366353;86368810	86368658;86369119	ES	0.5	50	50	ENSMUST00000032065.15	ENSMUSG00000029998.15	Pcyox1	chr6	protein_coding	prenylcysteine oxidase 1
chr6	86371565	86373955	-	86371565;86373102	86372896;86373955	ES	0.5	50	50	ENSMUST00000032065.15	ENSMUSG00000029998.15	Pcyox1	chr6	protein_coding	prenylcysteine oxidase 1
chr6	86366353	86369119	-	86368810	86369119	3pMXE	0.5	50	50	ENSMUST00000153723.3	ENSMUSG00000029998.15	Pcyox1	chr6	protein_coding	prenylcysteine oxidase 1
chr6	86371565	86373955	-	86371565	86372896	5pMXE	0.5	50	50	ENSMUST00000129650.2	ENSMUSG00000029998.15	Pcyox1	chr6	protein_coding	prenylcysteine oxidase 1
chr6	86371565	86373955	-	86373102	86373955	3pMXE	0.5	50	50	ENSMUST00000203960.2	ENSMUSG00000029998.15	Pcyox1	chr6	protein_coding	prenylcysteine oxidase 1
chr6	86395914	86397306	+	86395914;86396115	86396083;86397306	ES	0.33	50	50	ENSMUST00000095754.10	ENSMUSG00000071337.12	Tia1	chr6	protein_coding	cytotoxic granule-associated RNA binding protein 1
chr6	86395914;86396794	86396676;86397306	+	86395914;86396115	86396083;86397306	MXE	0.5	100	100	ENSMUST00000095754.10	ENSMUSG00000071337.12	Tia1	chr6	protein_coding	cytotoxic granule-associated RNA binding protein 1
chr6	86396115;86396794	86396676;86397306	+	86396115	86397306	cassetteExon	0.5	100	100	ENSMUST00000095754.10	ENSMUSG00000071337.12	Tia1	chr6	protein_coding	cytotoxic granule-associated RNA binding protein 1
chr6	86397393;86400653	86400588;86401327	+	86397393	86401327	cassetteExon	0.5	100	100	ENSMUST00000095754.10	ENSMUSG00000071337.12	Tia1	chr6	protein_coding	cytotoxic granule-associated RNA binding protein 1
chr6	86403672;86403923	86403814;86404655	+	86403672	86404655	cassetteExon	0.5	100	100	ENSMUST00000095754.10	ENSMUSG00000071337.12	Tia1	chr6	protein_coding	cytotoxic granule-associated RNA binding protein 1
chr6	86381504	86383917	+	86381504	86390786	A3SS	0.5	50	50	ENSMUST00000095754.10	ENSMUSG00000071337.12	Tia1	chr6	protein_coding	cytotoxic granule-associated RNA binding protein 1
chr6	86390888	86393285	+	86390882	86393285	A5SS	0.5	50	50	ENSMUST00000095754.10	ENSMUSG00000071337.12	Tia1	chr6	protein_coding	cytotoxic granule-associated RNA binding protein 1
chr6	86393378	86395860	+	86393383	86395860	A5SS	0.5	50	50	ENSMUST00000095754.10	ENSMUSG00000071337.12	Tia1	chr6	protein_coding	cytotoxic granule-associated RNA binding protein 1
chr6	86401493	86401944	+	86401402	86401944	A5SS	0.5	50	50	ENSMUST00000095754.10	ENSMUSG00000071337.12	Tia1	chr6	protein_coding	cytotoxic granule-associated RNA binding protein 1
chr6	86402185	86402432	+	86402052	86402432	A5SS	0.5	50	50	ENSMUST00000095754.10	ENSMUSG00000071337.12	Tia1	chr6	protein_coding	cytotoxic granule-associated RNA binding protein 1
chr6	86395914	86396676	+	86395914;86396115	86396083;86396676	ES	0.5	50	50	ENSMUST00000139928.8	ENSMUSG00000071337.12	Tia1	chr6	protein_coding	cytotoxic granule-associated RNA binding protein 1
chr6	86396115	86397306	+	86396115	86396676	3pMXE	0.5	50	50	ENSMUST00000139928.8	ENSMUSG00000071337.12	Tia1	chr6	protein_coding	cytotoxic granule-associated RNA binding protein 1
chr6	86395914;86396794	86396676;86397306	+	86395914	86397306	cassetteExon	0.5	100	100	ENSMUST00000148728.8	ENSMUSG00000071337.12	Tia1	chr6	protein_coding	cytotoxic granule-associated RNA binding protein 1
chr6	86397393	86401327	+	86397393	86400588	A3SS	0.5	50	50	ENSMUST00000134142.8	ENSMUSG00000071337.12	Tia1	chr6	protein_coding	cytotoxic granule-associated RNA binding protein 1
chr6	86402727	86403549	+	86402727	86407223	A3SS	0.5	50	50	ENSMUST00000130967.8	ENSMUSG00000071337.12	Tia1	chr6	protein_coding	cytotoxic granule-associated RNA binding protein 1
chr6	86404800	86407223	+	86402727	86407223	A5SS	0.5	50	50	ENSMUST00000130967.8	ENSMUSG00000071337.12	Tia1	chr6	protein_coding	cytotoxic granule-associated RNA binding protein 1
chr6	86395914	86397306	+	86395914	86396083	3pMXE	0.33	50	50	ENSMUST00000143718.8	ENSMUSG00000071337.12	Tia1	chr6	protein_coding	cytotoxic granule-associated RNA binding protein 1
chr6	86395914	86396676	+	86395914	86396083	A3SS	0.33	50	50	ENSMUST00000143718.8	ENSMUSG00000071337.12	Tia1	chr6	protein_coding	cytotoxic granule-associated RNA binding protein 1
chr6	86395914	86397306	+	86396794	86397306	5pMXE	0.33	50	50	ENSMUST00000147104.8	ENSMUSG00000071337.12	Tia1	chr6	protein_coding	cytotoxic granule-associated RNA binding protein 1
chr6	86396115	86397306	+	86396794	86397306	5pMXE	0.33	50	50	ENSMUST00000147104.8	ENSMUSG00000071337.12	Tia1	chr6	protein_coding	cytotoxic granule-associated RNA binding protein 1
chr6	86415465	86420709	+	86407395	86420709	A5SS	0.16	50	50	ENSMUST00000204137.2	ENSMUSG00000107539.2	Gm44790	chr6	protein_coding	predicted gene 44790
chr6	86415469	86420709	+	86407395	86420709	A5SS	0.16	50	50	ENSMUST00000204137.2	ENSMUSG00000107539.2	Gm44790	chr6	protein_coding	predicted gene 44790
chr6	86415776	86420709	+	86407395	86420709	A5SS	0.16	50	50	ENSMUST00000204137.2	ENSMUSG00000107539.2	Gm44790	chr6	protein_coding	predicted gene 44790
chr6	86415829	86420709	+	86407395	86420709	A5SS	0.16	50	50	ENSMUST00000204137.2	ENSMUSG00000107539.2	Gm44790	chr6	protein_coding	predicted gene 44790
chr6	86416240	86420709	+	86407395	86420709	A5SS	0.16	50	50	ENSMUST00000204137.2	ENSMUSG00000107539.2	Gm44790	chr6	protein_coding	predicted gene 44790
chr6	86442945	86449107	+	86442945	86446728	3pMXE	0.5	50	50	ENSMUST00000050497.14	ENSMUSG00000046679.17	C87436	chr6	protein_coding	expressed sequence C87436
chr6	86430695;86431295	86431242;86434798	+	86430695	86434798	cassetteExon	0.5	100	100	ENSMUST00000050497.14	ENSMUSG00000046679.17	C87436	chr6	protein_coding	expressed sequence C87436
chr6	86423250	86424323	+	86423250	86424293	A3SS	0.5	50	50	ENSMUST00000050497.14	ENSMUSG00000046679.17	C87436	chr6	protein_coding	expressed sequence C87436
chr6	86415465	86420709	+	86415469	86420709	A5SS	0.16	50	50	ENSMUST00000050497.14	ENSMUSG00000046679.17	C87436	chr6	protein_coding	expressed sequence C87436
chr6	86415776	86420709	+	86415469	86420709	A5SS	0.16	50	50	ENSMUST00000050497.14	ENSMUSG00000046679.17	C87436	chr6	protein_coding	expressed sequence C87436
chr6	86415829	86420709	+	86415469	86420709	A5SS	0.16	50	50	ENSMUST00000050497.14	ENSMUSG00000046679.17	C87436	chr6	protein_coding	expressed sequence C87436
chr6	86416240	86420709	+	86415469	86420709	A5SS	0.16	50	50	ENSMUST00000050497.14	ENSMUSG00000046679.17	C87436	chr6	protein_coding	expressed sequence C87436
chr6	86441152	86442783	+	86439663	86442783	A5SS	0.5	50	50	ENSMUST00000050497.14	ENSMUSG00000046679.17	C87436	chr6	protein_coding	expressed sequence C87436
chr6	86415776	86420709	+	86415465	86420709	A5SS	0.16	50	50	ENSMUST00000203568.3	ENSMUSG00000046679.17	C87436	chr6	protein_coding	expressed sequence C87436
chr6	86415829	86420709	+	86415465	86420709	A5SS	0.16	50	50	ENSMUST00000203568.3	ENSMUSG00000046679.17	C87436	chr6	protein_coding	expressed sequence C87436
chr6	86416240	86420709	+	86415465	86420709	A5SS	0.16	50	50	ENSMUST00000203568.3	ENSMUSG00000046679.17	C87436	chr6	protein_coding	expressed sequence C87436
chr6	86415829	86420709	+	86415776	86420709	A5SS	0.16	50	50	ENSMUST00000113700.8	ENSMUSG00000046679.17	C87436	chr6	protein_coding	expressed sequence C87436
chr6	86416240	86420709	+	86415776	86420709	A5SS	0.16	50	50	ENSMUST00000113700.8	ENSMUSG00000046679.17	C87436	chr6	protein_coding	expressed sequence C87436
chr6	86415829;86416240	86416106;86420709	+	86415829	86420709	cassetteExon	0.5	100	100	ENSMUST00000141972.8	ENSMUSG00000046679.17	C87436	chr6	protein_coding	expressed sequence C87436
chr6	86415829	86420709	+	86415829	86416106	3pMXE	0.5	50	50	ENSMUST00000143430.2	ENSMUSG00000046679.17	C87436	chr6	protein_coding	expressed sequence C87436
chr6	86415829	86420709	+	86416240	86420709	A5SS	0.16	50	50	ENSMUST00000113698.8	ENSMUSG00000046679.17	C87436	chr6	protein_coding	expressed sequence C87436
chr6	86452760	86457648	-	86449883	86457648	A3SS	0.5	50	50	ENSMUST00000129343.8	ENSMUSG00000085589.8	A430078I02Rik	chr6	lncRNA	RIKEN cDNA A430078I02 gene
chr6	86449883	86451765	-	86449883	86457648	A5SS	0.5	50	50	ENSMUST00000129343.8	ENSMUSG00000085589.8	A430078I02Rik	chr6	lncRNA	RIKEN cDNA A430078I02 gene
chr6	86509289	86540414	+	86509289	86527899	3pMXE	0.33	50	50	ENSMUST00000204068.3	ENSMUSG00000097048.8	1600020E01Rik	chr6	lncRNA	RIKEN cDNA 1600020E01 gene
chr6	86509289	86557779	+	86509289	86527899	3pMXE	0.33	50	50	ENSMUST00000204068.3	ENSMUSG00000097048.8	1600020E01Rik	chr6	lncRNA	RIKEN cDNA 1600020E01 gene
chr6	86504349	86504873	+	86503264	86504873	A5SS	0.25	50	50	ENSMUST00000204068.3	ENSMUSG00000097048.8	1600020E01Rik	chr6	lncRNA	RIKEN cDNA 1600020E01 gene
chr6	86504415	86504873	+	86503264	86504873	A5SS	0.25	50	50	ENSMUST00000204068.3	ENSMUSG00000097048.8	1600020E01Rik	chr6	lncRNA	RIKEN cDNA 1600020E01 gene
chr6	86504513	86504873	+	86503264	86504873	A5SS	0.25	50	50	ENSMUST00000204068.3	ENSMUSG00000097048.8	1600020E01Rik	chr6	lncRNA	RIKEN cDNA 1600020E01 gene
chr6	86509289	86540414	+	86509289;86528096	86527899;86540414	ES	0.5	50	50	ENSMUST00000204008.3	ENSMUSG00000097048.8	1600020E01Rik	chr6	lncRNA	RIKEN cDNA 1600020E01 gene
chr6	86509289	86540414	+	86509289	86557779	A3SS	0.33	50	50	ENSMUST00000204738.3	ENSMUSG00000097048.8	1600020E01Rik	chr6	lncRNA	RIKEN cDNA 1600020E01 gene
chr6	86504415	86504873	+	86504349	86504873	A5SS	0.25	50	50	ENSMUST00000204738.3	ENSMUSG00000097048.8	1600020E01Rik	chr6	lncRNA	RIKEN cDNA 1600020E01 gene
chr6	86504513	86504873	+	86504349	86504873	A5SS	0.25	50	50	ENSMUST00000204738.3	ENSMUSG00000097048.8	1600020E01Rik	chr6	lncRNA	RIKEN cDNA 1600020E01 gene
chr6	86555103	86557779	+	86509289	86557779	A5SS	0.5	50	50	ENSMUST00000204738.3	ENSMUSG00000097048.8	1600020E01Rik	chr6	lncRNA	RIKEN cDNA 1600020E01 gene
chr6	86504513	86504873	+	86504415	86504873	A5SS	0.25	50	50	ENSMUST00000204047.3	ENSMUSG00000097048.8	1600020E01Rik	chr6	lncRNA	RIKEN cDNA 1600020E01 gene
chr6	86504513	86504875	+	86504513	86504873	A3SS	0.5	50	50	ENSMUST00000181928.4	ENSMUSG00000097048.8	1600020E01Rik	chr6	lncRNA	RIKEN cDNA 1600020E01 gene
chr6	86630181;86635115	86635051;86640053	-	86630181	86640053	cassetteExon	0.5	100	100	ENSMUST00000001184.10	ENSMUSG00000001156.10	Mxd1	chr6	protein_coding	MAX dimerization protein 1
chr6	86626707	86628424	-	86628061	86628424	A3SS	0.5	50	50	ENSMUST00000001184.10	ENSMUSG00000001156.10	Mxd1	chr6	protein_coding	MAX dimerization protein 1
chr6	86659958	86661207	-	86659958	86661429	A5SS	0.5	50	50	ENSMUST00000001186.11	ENSMUSG00000001158.14	Snrnp27	chr6	protein_coding	small nuclear ribonucleoprotein 27 (U4/U6.U5)
chr6	86694499	86694974	-	86694433	86694974	A3SS	0.5	50	50	ENSMUST00000001185.14	ENSMUSG00000001157.14	Gmcl1	chr6	protein_coding	germ cell-less, spermatogenesis associated 1
chr6	86697502	86698323	-	86695086	86698323	A3SS	0.5	50	50	ENSMUST00000001185.14	ENSMUSG00000001157.14	Gmcl1	chr6	protein_coding	germ cell-less, spermatogenesis associated 1
chr6	86727895	86728045	-	86725962	86728045	A3SS	0.5	50	50	ENSMUST00000113675.8	ENSMUSG00000029994.18	Anxa4	chr6	protein_coding	annexin A4
chr6	86725962	86727210	-	86725962	86728045	A5SS	0.5	50	50	ENSMUST00000113675.8	ENSMUSG00000029994.18	Anxa4	chr6	protein_coding	annexin A4
chr6	86730875	86731901	-	86730875	86731835	A5SS	0.5	50	50	ENSMUST00000113675.8	ENSMUSG00000029994.18	Anxa4	chr6	protein_coding	annexin A4
chr6	86742789;86751996	86751931;86770491	-	86742789	86770491	cassetteExon	0.5	100	100	ENSMUST00000001187.15	ENSMUSG00000029994.18	Anxa4	chr6	protein_coding	annexin A4
chr6	86742789;86752030	86751931;86770491	-	86742789	86770491	cassetteExon	0.5	100	100	ENSMUST00000001187.15	ENSMUSG00000029994.18	Anxa4	chr6	protein_coding	annexin A4
chr6	86725962	86728045	-	86725962;86727895	86727210;86728045	ES	0.5	50	50	ENSMUST00000127152.9	ENSMUSG00000029994.18	Anxa4	chr6	protein_coding	annexin A4
chr6	86731948	86734801	-	86728101	86734801	A3SS	0.5	50	50	ENSMUST00000155456.8	ENSMUSG00000029994.18	Anxa4	chr6	protein_coding	annexin A4
chr6	86728101	86729135	-	86728101	86734801	A5SS	0.5	50	50	ENSMUST00000155456.8	ENSMUSG00000029994.18	Anxa4	chr6	protein_coding	annexin A4
chr6	86751996	86770491	-	86752030	86770491	A3SS	0.33	50	50	ENSMUST00000204441.3	ENSMUSG00000029994.18	Anxa4	chr6	protein_coding	annexin A4
chr6	86933554	86940975	+	86933554;86936256	86936014;86940975	ES	0.5	50	50	ENSMUST00000089519.13	ENSMUSG00000057230.15	Aak1	chr6	protein_coding	AP2 associated kinase 1
chr6	86936256	86940978	+	86936256	86940975	A3SS	0.5	50	50	ENSMUST00000089519.13	ENSMUSG00000057230.15	Aak1	chr6	protein_coding	AP2 associated kinase 1
chr6	86944355	86972822	+	86944355	86947973	A3SS&ES	0.5	50	50	ENSMUST00000089519.13	ENSMUSG00000057230.15	Aak1	chr6	protein_coding	AP2 associated kinase 1
chr6	86948068	86972822	+	86948068	86958278	A3SS&ES	0.5	50	50	ENSMUST00000089519.13	ENSMUSG00000057230.15	Aak1	chr6	protein_coding	AP2 associated kinase 1
chr6	86828297	86901996	+	86827197	86901996	A5SS	0.5	50	50	ENSMUST00000089519.13	ENSMUSG00000057230.15	Aak1	chr6	protein_coding	AP2 associated kinase 1
chr6	86944355;86948068	86947973;86972822	+	86944355	86972822	cassetteExon	0.5	100	100	ENSMUST00000204613.2	ENSMUSG00000057230.15	Aak1	chr6	protein_coding	AP2 associated kinase 1
chr6	86972046	86972822	+	86944355	86972822	A5SS	0.33	50	50	ENSMUST00000204613.2	ENSMUSG00000057230.15	Aak1	chr6	protein_coding	AP2 associated kinase 1
chr6	86972046	86972822	+	86948068	86972822	A5SS	0.33	50	50	ENSMUST00000204139.3	ENSMUSG00000057230.15	Aak1	chr6	protein_coding	AP2 associated kinase 1
chr6	86992683;86993376	86993158;86996347	+	86992683	86996347	cassetteExon	0.5	100	100	ENSMUST00000120240.8	ENSMUSG00000029993.17	Nfu1	chr6	protein_coding	NFU1 iron-sulfur cluster scaffold
chr6	86987165	86989889	+	86986941	86989889	A5SS	0.5	50	50	ENSMUST00000120240.8	ENSMUSG00000029993.17	Nfu1	chr6	protein_coding	NFU1 iron-sulfur cluster scaffold
chr6	86997821	87000110	+	86997824	87000110	A5SS	0.5	50	50	ENSMUST00000120240.8	ENSMUSG00000029993.17	Nfu1	chr6	protein_coding	NFU1 iron-sulfur cluster scaffold
chr6	87028010;87030242	87030184;87030733	+	87028010	87030733	cassetteExon	0.5	100	100	ENSMUST00000113657.8	ENSMUSG00000029992.15	Gfpt1	chr6	protein_coding	glutamine fructose-6-phosphate transaminase 1
chr6	87037582;87037814	87037767;87040787	+	87037582	87040787	cassetteExon	0.5	100	100	ENSMUST00000113658.8	ENSMUSG00000029992.15	Gfpt1	chr6	protein_coding	glutamine fructose-6-phosphate transaminase 1
chr6	87081824;87087116	87087041;87087859	+	87081824	87087859	cassetteExon	0.5	100	100	ENSMUST00000170124.4	ENSMUSG00000090891.4	D6Ertd527e	chr6	protein_coding	DNA segment, Chr 6, ERATO Doi 527, expressed
chr6	87081824;87087720	87087603;87087859	+	87081824	87087859	cassetteExon	0.5	100	100	ENSMUST00000170124.4	ENSMUSG00000090891.4	D6Ertd527e	chr6	protein_coding	DNA segment, Chr 6, ERATO Doi 527, expressed
chr6	87081824	87087856	+	87081824	87087859	A3SS	0.25	50	50	ENSMUST00000170124.4	ENSMUSG00000090891.4	D6Ertd527e	chr6	protein_coding	DNA segment, Chr 6, ERATO Doi 527, expressed
chr6	87081824	87087041	+	87081824	87087856	A3SS	0.25	50	50	ENSMUST00000204927.2	ENSMUSG00000090891.4	D6Ertd527e	chr6	protein_coding	DNA segment, Chr 6, ERATO Doi 527, expressed
chr6	87081824	87087603	+	87081824	87087856	A3SS	0.25	50	50	ENSMUST00000204927.2	ENSMUSG00000090891.4	D6Ertd527e	chr6	protein_coding	DNA segment, Chr 6, ERATO Doi 527, expressed
chr6	87081821	87087856	+	87081824	87087856	A5SS	0.5	50	50	ENSMUST00000204927.2	ENSMUSG00000090891.4	D6Ertd527e	chr6	protein_coding	DNA segment, Chr 6, ERATO Doi 527, expressed
chr6	87081824;87087720	87087603;87087859	+	87081824;87087116	87087041;87087859	MXE	0.5	100	100	ENSMUST00000203725.2	ENSMUSG00000090891.4	D6Ertd527e	chr6	protein_coding	DNA segment, Chr 6, ERATO Doi 527, expressed
chr6	87246285;87247762	87247737;87259669	-	87246285	87259669	cassetteExon	0.5	100	100	ENSMUST00000042025.12	ENSMUSG00000033420.13	Antxr1	chr6	protein_coding	anthrax toxin receptor 1
chr6	87135187	87157092	-	87114337	87157092	A3SS	0.5	50	50	ENSMUST00000042025.12	ENSMUSG00000033420.13	Antxr1	chr6	protein_coding	anthrax toxin receptor 1
chr6	87246285	87247045	-	87246285	87259669	A5SS	0.33	50	50	ENSMUST00000042025.12	ENSMUSG00000033420.13	Antxr1	chr6	protein_coding	anthrax toxin receptor 1
chr6	87246285	87247045	-	87246285	87247737	A5SS	0.33	50	50	ENSMUST00000203131.3	ENSMUSG00000033420.13	Antxr1	chr6	protein_coding	anthrax toxin receptor 1
chr6	87473094	87509808	-	87473094	87473205	5pMXE	0.5	50	50	ENSMUST00000145128.8	ENSMUSG00000030047.15	Arhgap25	chr6	protein_coding	Rho GTPase activating protein 25
chr6	87442679	87443455	-	87442679	87442992	A5SS	0.5	50	50	ENSMUST00000145128.8	ENSMUSG00000030047.15	Arhgap25	chr6	protein_coding	Rho GTPase activating protein 25
chr6	87469247	87509808	-	87469247;87473094	87472895;87509808	ES	0.5	50	50	ENSMUST00000113637.9	ENSMUSG00000030047.15	Arhgap25	chr6	protein_coding	Rho GTPase activating protein 25
chr6	87565988	87567583	-	87565988	87567452	A5SS	0.5	50	50	ENSMUST00000204682.3	ENSMUSG00000049409.10	Prokr1	chr6	protein_coding	prokineticin receptor 1
chr6	87635537	87635823	-	87635547	87635823	A3SS	0.5	50	50	ENSMUST00000065997.5	ENSMUSG00000030051.11	Aplf	chr6	protein_coding	aprataxin and PNKP like factor
chr6	87640697	87645398	-	87640839	87645398	A3SS	0.5	50	50	ENSMUST00000065997.5	ENSMUSG00000030051.11	Aplf	chr6	protein_coding	aprataxin and PNKP like factor
chr6	87645469	87648842	-	87645469	87648972	A5SS	0.5	50	50	ENSMUST00000065997.5	ENSMUSG00000030051.11	Aplf	chr6	protein_coding	aprataxin and PNKP like factor
chr6	87652896	87655901	+	87652896;87653305	87653238;87655901	ES	0.33	50	50	ENSMUST00000160577.2	ENSMUSG00000071332.13	E230015B07Rik	chr6	transcribed_unprocessed_pseudogene	RIKEN cDNA E230015B07 gene
chr6	87649548	87651659	+	87649548	87655901	A3SS	0.5	50	50	ENSMUST00000095740.7	ENSMUSG00000071332.13	E230015B07Rik	chr6	transcribed_unprocessed_pseudogene	RIKEN cDNA E230015B07 gene
chr6	87652896	87655901	+	87649548	87655901	A5SS	0.33	50	50	ENSMUST00000095740.7	ENSMUSG00000071332.13	E230015B07Rik	chr6	transcribed_unprocessed_pseudogene	RIKEN cDNA E230015B07 gene
chr6	87653305	87655901	+	87649548	87655901	A5SS	0.33	50	50	ENSMUST00000095740.7	ENSMUSG00000071332.13	E230015B07Rik	chr6	transcribed_unprocessed_pseudogene	RIKEN cDNA E230015B07 gene
chr6	87649548	87655901	+	87649548;87652896	87651659;87655901	ES	0.33	50	50	ENSMUST00000159884.8	ENSMUSG00000071332.13	E230015B07Rik	chr6	transcribed_unprocessed_pseudogene	RIKEN cDNA E230015B07 gene
chr6	87656965	87657047	-	87656965	87657133	A5SS	0.5	50	50	ENSMUST00000162547.3	ENSMUSG00000089997.3	1810020O05Rik	chr6	protein_coding	Riken cDNA 1810020O05 gene
chr6	87726259	87728746	+	87726259;87727744	87727606;87728746	ES	0.5	50	50	ENSMUST00000159570.9	ENSMUSG00000068263.12	Efcc1	chr6	protein_coding	EF hand and coiled-coil domain containing 1
chr6	87726259	87727603	+	87726259	87727606	A3SS	0.33	50	50	ENSMUST00000159570.9	ENSMUSG00000068263.12	Efcc1	chr6	protein_coding	EF hand and coiled-coil domain containing 1
chr6	87726259	87728746	+	87726259;87727744	87727603;87728746	ES	0.5	50	50	ENSMUST00000032132.9	ENSMUSG00000068263.12	Efcc1	chr6	protein_coding	EF hand and coiled-coil domain containing 1
chr6	87771779	87788329	-	87771779	87786601	5pMXE	0.2	50	50	ENSMUST00000032134.9	ENSMUSG00000030055.17	Rab43	chr6	protein_coding	RAB43, member RAS oncogene family
chr6	87771779	87788983	-	87771779	87786601	5pMXE	0.2	50	50	ENSMUST00000032134.9	ENSMUSG00000030055.17	Rab43	chr6	protein_coding	RAB43, member RAS oncogene family
chr6	87771779	87789108	-	87771779	87786601	5pMXE	0.2	50	50	ENSMUST00000032134.9	ENSMUSG00000030055.17	Rab43	chr6	protein_coding	RAB43, member RAS oncogene family
chr6	87771779	87796539	-	87771779	87786601	5pMXE	0.2	50	50	ENSMUST00000032134.9	ENSMUSG00000030055.17	Rab43	chr6	protein_coding	RAB43, member RAS oncogene family
chr6	87771779	87788983	-	87771779	87788329	5pMXE	0.2	50	50	ENSMUST00000078647.11	ENSMUSG00000030055.17	Rab43	chr6	protein_coding	RAB43, member RAS oncogene family
chr6	87771779	87789108	-	87771779	87788329	5pMXE	0.2	50	50	ENSMUST00000078647.11	ENSMUSG00000030055.17	Rab43	chr6	protein_coding	RAB43, member RAS oncogene family
chr6	87771779	87796539	-	87771779	87788329	5pMXE	0.2	50	50	ENSMUST00000078647.11	ENSMUSG00000030055.17	Rab43	chr6	protein_coding	RAB43, member RAS oncogene family
chr6	87771779	87796539	-	87771779	87789108	5pMXE	0.2	50	50	ENSMUST00000125377.8	ENSMUSG00000030055.17	Rab43	chr6	protein_coding	RAB43, member RAS oncogene family
chr6	87771779	87788983	-	87771779	87789108	A5SS	0.2	50	50	ENSMUST00000125377.8	ENSMUSG00000030055.17	Rab43	chr6	protein_coding	RAB43, member RAS oncogene family
chr6	87771779	87796539	-	87771779	87788983	5pMXE	0.2	50	50	ENSMUST00000123216.2	ENSMUSG00000030055.17	Rab43	chr6	protein_coding	RAB43, member RAS oncogene family
chr6	87804678	87811410	-	87804678;87810666	87810624;87811410	ES	0.33	50	50	ENSMUST00000204419.2	ENSMUSG00000107928.2	Gm45140	chr6	protein_coding	predicted gene 45140
chr6	87802466	87804566	-	87802470	87804566	A3SS	0.5	50	50	ENSMUST00000204419.2	ENSMUSG00000107928.2	Gm45140	chr6	protein_coding	predicted gene 45140
chr6	87810708	87811410	-	87810666	87811410	A3SS	0.33	50	50	ENSMUST00000204419.2	ENSMUSG00000107928.2	Gm45140	chr6	protein_coding	predicted gene 45140
chr6	87796185	87796539	-	87771779	87796539	A3SS	0.5	50	50	ENSMUST00000204169.2	ENSMUSG00000107928.2	Gm45140	chr6	protein_coding	predicted gene 45140
chr6	87804678;87810708	87810624;87811410	-	87804678	87811410	cassetteExon	0.5	100	100	ENSMUST00000205070.3	ENSMUSG00000030056.9	Isy1	chr6	protein_coding	ISY1 splicing factor homolog
chr6	87804678	87811410	-	87810666	87811410	3pMXE	0.33	50	50	ENSMUST00000204892.2	ENSMUSG00000030056.9	Isy1	chr6	protein_coding	ISY1 splicing factor homolog
chr6	87822775;87826091	87825997;87827886	-	87822775	87827886	cassetteExon	0.5	100	100	ENSMUST00000204653.3	ENSMUSG00000030057.16	Cnbp	chr6	protein_coding	cellular nucleic acid binding protein
chr6	87822305	87822447	-	87822302	87822447	A3SS	0.5	50	50	ENSMUST00000204653.3	ENSMUSG00000030057.16	Cnbp	chr6	protein_coding	cellular nucleic acid binding protein
chr6	87822539	87822656	-	87822539	87822638	A5SS	0.33	50	50	ENSMUST00000204653.3	ENSMUSG00000030057.16	Cnbp	chr6	protein_coding	cellular nucleic acid binding protein
chr6	87822539	87822659	-	87822539	87822638	A5SS	0.33	50	50	ENSMUST00000204653.3	ENSMUSG00000030057.16	Cnbp	chr6	protein_coding	cellular nucleic acid binding protein
chr6	87822539	87822659	-	87822539	87822656	A5SS	0.33	50	50	ENSMUST00000204890.3	ENSMUSG00000030057.16	Cnbp	chr6	protein_coding	cellular nucleic acid binding protein
chr6	87865054	87866639	+	87865054;87866105	87866053;87866639	ES	0.5	50	50	ENSMUST00000113607.10	ENSMUSG00000030058.18	Copg1	chr6	protein_coding	coatomer protein complex, subunit gamma 1
chr6	87882249	87884360	+	87882249	87884355	A3SS	0.5	50	50	ENSMUST00000113607.10	ENSMUSG00000030058.18	Copg1	chr6	protein_coding	coatomer protein complex, subunit gamma 1
chr6	87885931	87886646	+	87885615	87886646	A5SS	0.5	50	50	ENSMUST00000113607.10	ENSMUSG00000030058.18	Copg1	chr6	protein_coding	coatomer protein complex, subunit gamma 1
chr6	87891677;87893749	87893645;87894821	+	87891677	87894821	cassetteExon	0.5	100	100	ENSMUST00000032141.14	ENSMUSG00000030060.15	Hmces	chr6	protein_coding	5-hydroxymethylcytosine (hmC) binding, ES cell specific
chr6	87902792;87909964	87909841;87910224	+	87902792	87910224	cassetteExon	0.5	100	100	ENSMUST00000032141.14	ENSMUSG00000030060.15	Hmces	chr6	protein_coding	5-hydroxymethylcytosine (hmC) binding, ES cell specific
chr6	87902792;87909964	87909845;87910224	+	87902792	87910224	cassetteExon	0.5	100	100	ENSMUST00000032141.14	ENSMUSG00000030060.15	Hmces	chr6	protein_coding	5-hydroxymethylcytosine (hmC) binding, ES cell specific
chr6	87902792	87910224	+	87902792	87909845	3pMXE	0.33	50	50	ENSMUST00000204614.3	ENSMUSG00000030060.15	Hmces	chr6	protein_coding	5-hydroxymethylcytosine (hmC) binding, ES cell specific
chr6	87902792	87909841	+	87902792	87909845	A3SS	0.33	50	50	ENSMUST00000204614.3	ENSMUSG00000030060.15	Hmces	chr6	protein_coding	5-hydroxymethylcytosine (hmC) binding, ES cell specific
chr6	87958866	87959942	+	87958077	87959942	A5SS	0.5	50	50	ENSMUST00000134600.2	ENSMUSG00000084950.8	Gm5577	chr6	lncRNA	predicted gene 5577
chr6	87990680;87992700	87992614;88022055	-	87990680	88022055	cassetteExon	0.5	100	100	ENSMUST00000113600.10	ENSMUSG00000079477.10	Rab7	chr6	protein_coding	RAB7, member RAS oncogene family
chr6	87990680	87991568	-	87990680	88022055	A5SS	0.2	50	50	ENSMUST00000113600.10	ENSMUSG00000079477.10	Rab7	chr6	protein_coding	RAB7, member RAS oncogene family
chr6	87990680	87996618	-	87990680	88022055	A5SS	0.2	50	50	ENSMUST00000113600.10	ENSMUSG00000079477.10	Rab7	chr6	protein_coding	RAB7, member RAS oncogene family
chr6	87990680	88021919	-	87990680	88022055	A5SS	0.2	50	50	ENSMUST00000113600.10	ENSMUSG00000079477.10	Rab7	chr6	protein_coding	RAB7, member RAS oncogene family
chr6	87990680	87991568	-	87990680	88021919	A5SS	0.2	50	50	ENSMUST00000113598.8	ENSMUSG00000079477.10	Rab7	chr6	protein_coding	RAB7, member RAS oncogene family
chr6	87990680	87992614	-	87990680	88021919	A5SS	0.2	50	50	ENSMUST00000113598.8	ENSMUSG00000079477.10	Rab7	chr6	protein_coding	RAB7, member RAS oncogene family
chr6	87990680	87996618	-	87990680	88021919	A5SS	0.2	50	50	ENSMUST00000113598.8	ENSMUSG00000079477.10	Rab7	chr6	protein_coding	RAB7, member RAS oncogene family
chr6	87990680	87996618	-	87990680;87992700	87992614;87996618	ES	0.5	50	50	ENSMUST00000113597.8	ENSMUSG00000079477.10	Rab7	chr6	protein_coding	RAB7, member RAS oncogene family
chr6	87992700	88022055	-	87992700	87996618	5pMXE	0.5	50	50	ENSMUST00000113597.8	ENSMUSG00000079477.10	Rab7	chr6	protein_coding	RAB7, member RAS oncogene family
chr6	87990680;87991702	87991568;87992614	-	87990680	87992614	cassetteExon	0.5	100	100	ENSMUST00000113597.8	ENSMUSG00000079477.10	Rab7	chr6	protein_coding	RAB7, member RAS oncogene family
chr6	87990680	87996618	-	87990680	87991568	A5SS&ES	0.2	50	50	ENSMUST00000113596.8	ENSMUSG00000079477.10	Rab7	chr6	protein_coding	RAB7, member RAS oncogene family
chr6	87990680	87996618	-	87990680	87992614	A5SS&ES	0.2	50	50	ENSMUST00000204126.2	ENSMUSG00000079477.10	Rab7	chr6	protein_coding	RAB7, member RAS oncogene family
chr6	88061776	88066971	+	88061776;88065396	88065332;88066971	ES	0.5	50	50	ENSMUST00000032143.8	ENSMUSG00000030062.8	Rpn1	chr6	protein_coding	ribophorin I
chr6	88175863	88176499	+	88170982	88176499	A5SS	0.5	50	50	ENSMUST00000170089.8	ENSMUSG00000015053.15	Gata2	chr6	protein_coding	GATA binding protein 2
chr6	88200108	88200536	-	88200108	88202633	A5SS	0.5	50	50	ENSMUST00000151901.2	ENSMUSG00000047046.9	1700031F10Rik	chr6	lncRNA	RIKEN cDNA 1700031F10 gene
chr6	88258687	88332465	-	88258687;88275218	88274559;88332465	ES	0.5	50	50	ENSMUST00000165242.4	ENSMUSG00000033216.10	Eefsec	chr6	protein_coding	eukaryotic elongation factor, selenocysteine-tRNA-specific
chr6	88335624	88423188	-	88335624;88353393	88353186;88423188	ES	0.5	50	50	ENSMUST00000165242.4	ENSMUSG00000033216.10	Eefsec	chr6	protein_coding	eukaryotic elongation factor, selenocysteine-tRNA-specific
chr6	88235373;88249083	88249004;88258531	-	88235373	88258531	cassetteExon	0.5	100	100	ENSMUST00000165242.4	ENSMUSG00000033216.10	Eefsec	chr6	protein_coding	eukaryotic elongation factor, selenocysteine-tRNA-specific
chr6	88353393	88416776	-	88353393	88423188	A5SS	0.33	50	50	ENSMUST00000165242.4	ENSMUSG00000033216.10	Eefsec	chr6	protein_coding	eukaryotic elongation factor, selenocysteine-tRNA-specific
chr6	88353393	88423447	-	88353393	88423188	A5SS	0.33	50	50	ENSMUST00000165242.4	ENSMUSG00000033216.10	Eefsec	chr6	protein_coding	eukaryotic elongation factor, selenocysteine-tRNA-specific
chr6	88275218	88332465	-	88258687	88332465	A3SS	0.5	50	50	ENSMUST00000203213.3	ENSMUSG00000033216.10	Eefsec	chr6	protein_coding	eukaryotic elongation factor, selenocysteine-tRNA-specific
chr6	88258687	88274559	-	88258687	88332465	A5SS	0.5	50	50	ENSMUST00000203213.3	ENSMUSG00000033216.10	Eefsec	chr6	protein_coding	eukaryotic elongation factor, selenocysteine-tRNA-specific
chr6	88335624	88423188	-	88335624	88353186	A5SS&ES	0.5	50	50	ENSMUST00000203213.3	ENSMUSG00000033216.10	Eefsec	chr6	protein_coding	eukaryotic elongation factor, selenocysteine-tRNA-specific
chr6	88353393	88416776	-	88353393	88423447	A5SS	0.33	50	50	ENSMUST00000203213.3	ENSMUSG00000033216.10	Eefsec	chr6	protein_coding	eukaryotic elongation factor, selenocysteine-tRNA-specific
chr6	88442932	88444548	+	88442650	88444548	A5SS	0.5	50	50	ENSMUST00000032165.16	ENSMUSG00000030079.16	Ruvbl1	chr6	protein_coding	RuvB-like protein 1
chr6	88492551;88494774	88494694;88495353	-	88492551	88495353	cassetteExon	0.5	100	100	ENSMUST00000032168.7	ENSMUSG00000030082.15	Sec61a1	chr6	protein_coding	Sec61 alpha 1 subunit (S. cerevisiae)
chr6	88485704	88489185	-	88485704	88489084	A5SS	0.5	50	50	ENSMUST00000032168.7	ENSMUSG00000030082.15	Sec61a1	chr6	protein_coding	Sec61 alpha 1 subunit (S. cerevisiae)
chr6	88595940	88614628	-	88595940	88604379	5pMXE	0.5	50	50	ENSMUST00000120933.5	ENSMUSG00000033182.13	Kbtbd12	chr6	protein_coding	kelch repeat and BTB (POZ) domain containing 12
chr6	88588423	88591076	-	88588423	88590876	A5SS	0.5	50	50	ENSMUST00000120933.5	ENSMUSG00000033182.13	Kbtbd12	chr6	protein_coding	kelch repeat and BTB (POZ) domain containing 12
chr6	88591146	88595349	-	88591146	88594765	A5SS	0.5	50	50	ENSMUST00000120933.5	ENSMUSG00000033182.13	Kbtbd12	chr6	protein_coding	kelch repeat and BTB (POZ) domain containing 12
chr6	88698805	88699924	-	88698805	88702766	A5SS	0.5	50	50	ENSMUST00000181355.4	ENSMUSG00000097730.4	Gm26588	chr6	lncRNA	predicted gene, 26588
chr6	88702827	88784993	+	88702827;88741684	88741578;88784993	ES	0.5	50	50	ENSMUST00000113585.9	ENSMUSG00000033174.18	Mgll	chr6	protein_coding	monoglyceride lipase
chr6	88786428;88790945	88790862;88795556	+	88786428	88795556	cassetteExon	0.5	100	100	ENSMUST00000113585.9	ENSMUSG00000033174.18	Mgll	chr6	protein_coding	monoglyceride lipase
chr6	88741684	88743214	+	88741684	88784993	A3SS	0.5	50	50	ENSMUST00000113585.9	ENSMUSG00000033174.18	Mgll	chr6	protein_coding	monoglyceride lipase
chr6	88795645	88800308	+	88795645	88800173	A3SS	0.5	50	50	ENSMUST00000113585.9	ENSMUSG00000033174.18	Mgll	chr6	protein_coding	monoglyceride lipase
chr6	88702160	88702683	+	88701553	88702683	A5SS	0.5	50	50	ENSMUST00000113585.9	ENSMUSG00000033174.18	Mgll	chr6	protein_coding	monoglyceride lipase
chr6	88813434	88815100	-	88813434;88813707	88813507;88815100	ES	0.5	50	50	ENSMUST00000032169.8	ENSMUSG00000030083.12	Abtb1	chr6	protein_coding	ankyrin repeat and  BTB (POZ) domain containing 1
chr6	88816753	88817820	-	88816753;88817747	88817692;88817820	ES	0.33	50	50	ENSMUST00000032169.8	ENSMUSG00000030083.12	Abtb1	chr6	protein_coding	ankyrin repeat and  BTB (POZ) domain containing 1
chr6	88815247	88815362	-	88815267	88815362	A3SS	0.5	50	50	ENSMUST00000032169.8	ENSMUSG00000030083.12	Abtb1	chr6	protein_coding	ankyrin repeat and  BTB (POZ) domain containing 1
chr6	88817763	88817820	-	88817747	88817820	A3SS	0.33	50	50	ENSMUST00000032169.8	ENSMUSG00000030083.12	Abtb1	chr6	protein_coding	ankyrin repeat and  BTB (POZ) domain containing 1
chr6	88815943	88816028	-	88815943	88816167	A5SS	0.5	50	50	ENSMUST00000032169.8	ENSMUSG00000030083.12	Abtb1	chr6	protein_coding	ankyrin repeat and  BTB (POZ) domain containing 1
chr6	88817747	88817855	-	88817747	88817820	A5SS	0.5	50	50	ENSMUST00000032169.8	ENSMUSG00000030083.12	Abtb1	chr6	protein_coding	ankyrin repeat and  BTB (POZ) domain containing 1
chr6	88816753	88817820	-	88816753	88817692	A5SS&ES	0.5	50	50	ENSMUST00000203137.3	ENSMUSG00000030083.12	Abtb1	chr6	protein_coding	ankyrin repeat and  BTB (POZ) domain containing 1
chr6	88813434	88815100	-	88813434	88813507	A5SS	0.5	50	50	ENSMUST00000203272.3	ENSMUSG00000030083.12	Abtb1	chr6	protein_coding	ankyrin repeat and  BTB (POZ) domain containing 1
chr6	88813434	88815100	-	88813707	88815100	A3SS	0.5	50	50	ENSMUST00000204560.3	ENSMUSG00000030083.12	Abtb1	chr6	protein_coding	ankyrin repeat and  BTB (POZ) domain containing 1
chr6	88816753;88817763	88817692;88817820	-	88816753	88817820	cassetteExon	0.5	100	100	ENSMUST00000203864.3	ENSMUSG00000030083.12	Abtb1	chr6	protein_coding	ankyrin repeat and  BTB (POZ) domain containing 1
chr6	88842271	88851211	-	88842271	88850987	5pMXE	0.16	50	50	ENSMUST00000038409.12	ENSMUSG00000033152.14	Podxl2	chr6	protein_coding	podocalyxin-like 2
chr6	88842271	88851338	-	88842271	88850987	5pMXE	0.16	50	50	ENSMUST00000038409.12	ENSMUSG00000033152.14	Podxl2	chr6	protein_coding	podocalyxin-like 2
chr6	88842271	88851516	-	88842271	88850987	5pMXE	0.16	50	50	ENSMUST00000038409.12	ENSMUSG00000033152.14	Podxl2	chr6	protein_coding	podocalyxin-like 2
chr6	88842271	88851638	-	88842271	88850987	5pMXE	0.16	50	50	ENSMUST00000038409.12	ENSMUSG00000033152.14	Podxl2	chr6	protein_coding	podocalyxin-like 2
chr6	88842271	88851901	-	88842271	88850987	5pMXE	0.16	50	50	ENSMUST00000038409.12	ENSMUSG00000033152.14	Podxl2	chr6	protein_coding	podocalyxin-like 2
chr6	88821399	88822048	-	88820668	88822048	A3SS	0.5	50	50	ENSMUST00000038409.12	ENSMUSG00000033152.14	Podxl2	chr6	protein_coding	podocalyxin-like 2
chr6	88842271	88851638	-	88842271	88851338	5pMXE	0.16	50	50	ENSMUST00000061262.11	ENSMUSG00000033152.14	Podxl2	chr6	protein_coding	podocalyxin-like 2
chr6	88842271	88851901	-	88842271	88851338	5pMXE	0.16	50	50	ENSMUST00000061262.11	ENSMUSG00000033152.14	Podxl2	chr6	protein_coding	podocalyxin-like 2
chr6	88842271	88851211	-	88842271	88851338	A5SS	0.16	50	50	ENSMUST00000061262.11	ENSMUSG00000033152.14	Podxl2	chr6	protein_coding	podocalyxin-like 2
chr6	88842271	88851516	-	88842271	88851338	A5SS	0.16	50	50	ENSMUST00000061262.11	ENSMUSG00000033152.14	Podxl2	chr6	protein_coding	podocalyxin-like 2
chr6	88842271	88851211	-	88842271	88851901	A5SS	0.16	50	50	ENSMUST00000145944.3	ENSMUSG00000033152.14	Podxl2	chr6	protein_coding	podocalyxin-like 2
chr6	88842271	88851516	-	88842271	88851901	A5SS	0.16	50	50	ENSMUST00000145944.3	ENSMUSG00000033152.14	Podxl2	chr6	protein_coding	podocalyxin-like 2
chr6	88842271	88851638	-	88842271	88851901	A5SS	0.16	50	50	ENSMUST00000145944.3	ENSMUSG00000033152.14	Podxl2	chr6	protein_coding	podocalyxin-like 2
chr6	88842271	88851211	-	88842271	88851516	A5SS	0.16	50	50	ENSMUST00000140455.8	ENSMUSG00000033152.14	Podxl2	chr6	protein_coding	podocalyxin-like 2
chr6	88842271	88851638	-	88842271	88851516	A5SS	0.16	50	50	ENSMUST00000140455.8	ENSMUSG00000033152.14	Podxl2	chr6	protein_coding	podocalyxin-like 2
chr6	88842271	88851211	-	88842271	88851638	A5SS	0.16	50	50	ENSMUST00000145780.2	ENSMUSG00000033152.14	Podxl2	chr6	protein_coding	podocalyxin-like 2
chr6	88870495	88875627	-	88870495;88874498	88874269;88875627	ES	0.33	50	50	ENSMUST00000058011.8	ENSMUSG00000002870.9	Mcm2	chr6	protein_coding	minichromosome maintenance complex component 2
chr6	88869199	88869927	-	88869177	88869927	A3SS	0.5	50	50	ENSMUST00000058011.8	ENSMUSG00000002870.9	Mcm2	chr6	protein_coding	minichromosome maintenance complex component 2
chr6	88874373	88875627	-	88874498	88875627	A3SS	0.33	50	50	ENSMUST00000058011.8	ENSMUSG00000002870.9	Mcm2	chr6	protein_coding	minichromosome maintenance complex component 2
chr6	88870495	88875627	-	88874373	88875627	A3SS&ES	0.33	50	50	ENSMUST00000204393.2	ENSMUSG00000002870.9	Mcm2	chr6	protein_coding	minichromosome maintenance complex component 2
chr6	88870495;88874373	88874269;88875627	-	88870495	88875627	cassetteExon	0.5	100	100	ENSMUST00000203935.2	ENSMUSG00000002870.9	Mcm2	chr6	protein_coding	minichromosome maintenance complex component 2
chr6	88870495	88875627	-	88874498	88875627	3pMXE	0.33	50	50	ENSMUST00000204217.2	ENSMUSG00000002870.9	Mcm2	chr6	protein_coding	minichromosome maintenance complex component 2
chr6	88885054	88886272	+	88885054;88885298	88885166;88886272	ES	0.33	50	50	ENSMUST00000055022.15	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88887243	88887530	+	88887243;88887383	88887323;88887530	ES	0.5	50	50	ENSMUST00000055022.15	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88887383	88887779	+	88887383;88887632	88887530;88887779	ES	0.33	50	50	ENSMUST00000055022.15	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88883060;88883694	88883520;88884923	+	88883060	88884923	cassetteExon	0.5	100	100	ENSMUST00000055022.15	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88883060;88883694	88883523;88884923	+	88883060	88884923	cassetteExon	0.5	100	100	ENSMUST00000055022.15	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88883060;88884808	88884552;88884923	+	88883060	88884923	cassetteExon	0.5	100	100	ENSMUST00000055022.15	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88883060;88884808	88884558;88884923	+	88883060	88884923	cassetteExon	0.5	100	100	ENSMUST00000055022.15	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88885054	88885233	+	88885054	88885166	A3SS	0.25	50	50	ENSMUST00000055022.15	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88885054	88887145	+	88885054	88885166	A3SS&ES	0.25	50	50	ENSMUST00000055022.15	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88886358	88886463	+	88886358	88886490	A3SS	0.5	50	50	ENSMUST00000055022.15	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88887632	88888062	+	88887632	88887779	A3SS&ES	0.5	50	50	ENSMUST00000055022.15	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88882808	88882931	+	88879512	88882931	A5SS	0.5	50	50	ENSMUST00000055022.15	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88879512	88882931	+	88879512	88886272	A3SS	0.5	50	50	ENSMUST00000138415.2	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88885054	88886272	+	88879512	88886272	A5SS	0.33	50	50	ENSMUST00000138415.2	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88885298	88886272	+	88879512	88886272	A5SS	0.33	50	50	ENSMUST00000138415.2	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88883060	88884552	+	88883060	88883523	3pMXE	0.2	50	50	ENSMUST00000141163.8	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88883060	88884558	+	88883060	88883523	3pMXE	0.2	50	50	ENSMUST00000141163.8	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88883060	88884923	+	88883060	88883523	3pMXE	0.2	50	50	ENSMUST00000141163.8	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88883060	88883520	+	88883060	88883523	A3SS	0.2	50	50	ENSMUST00000141163.8	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88887243	88887530	+	88887243	88887323	3pMXE	0.33	50	50	ENSMUST00000135778.8	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88887243	88887779	+	88887243	88887323	3pMXE	0.33	50	50	ENSMUST00000135778.8	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88885054	88885233	+	88885054	88887145	A3SS	0.25	50	50	ENSMUST00000135778.8	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88885054	88886272	+	88885054	88887145	A3SS	0.25	50	50	ENSMUST00000135778.8	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88883060;88883694	88883520;88884923	+	88883060;88884808	88884558;88884923	MXE	0.5	100	100	ENSMUST00000153874.8	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88883060;88883694	88883523;88884923	+	88883060;88884808	88884558;88884923	MXE	0.5	100	100	ENSMUST00000153874.8	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88883060	88884552	+	88883060	88884558	A3SS	0.2	50	50	ENSMUST00000153874.8	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88885054;88885298	88885233;88886272	+	88885054	88886272	cassetteExon	0.5	100	100	ENSMUST00000203694.3	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88883060;88884808	88884552;88884923	+	88883060;88883694	88883520;88884923	MXE	0.5	100	100	ENSMUST00000203345.3	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88885054	88886272	+	88885298	88886272	A5SS&ES	0.5	50	50	ENSMUST00000144405.3	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88883060	88884923	+	88883060	88884552	3pMXE	0.2	50	50	ENSMUST00000151379.2	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88883060	88883520	+	88883060	88884552	A3SS	0.2	50	50	ENSMUST00000151379.2	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88887243	88887779	+	88887243;88887383	88887323;88887779	ES	0.33	50	50	ENSMUST00000203648.3	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88887243;88887632	88887530;88887779	+	88887243;88887383	88887323;88887779	MXE	0.5	100	100	ENSMUST00000203648.3	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88887243	88887530	+	88887383	88887530	A5SS	0.5	50	50	ENSMUST00000128790.8	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88887243	88887779	+	88887632	88887779	A5SS&ES	0.33	50	50	ENSMUST00000128790.8	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88887383	88887779	+	88887383	88887530	3pMXE	0.5	50	50	ENSMUST00000152585.8	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88887243;88887632	88887323;88887779	+	88887243	88887779	cassetteExon	0.5	100	100	ENSMUST00000150236.8	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	88887243;88887632	88887530;88887779	+	88887243	88887779	cassetteExon	0.5	100	100	ENSMUST00000150236.8	ENSMUSG00000002871.15	Tpra1	chr6	protein_coding	transmembrane protein, adipocyte asscociated 1
chr6	89075615	89078496	+	89075615;89076509	89076411;89078496	ES	0.33	50	50	ENSMUST00000153517.8	ENSMUSG00000055403.14	4933427D06Rik	chr6	lncRNA	RIKEN cDNA 4933427D06 gene
chr6	89078159	89078496	+	89076509	89078496	A5SS	0.33	50	50	ENSMUST00000153517.8	ENSMUSG00000055403.14	4933427D06Rik	chr6	lncRNA	RIKEN cDNA 4933427D06 gene
chr6	89078159	89078496	+	89075615	89078496	A5SS	0.33	50	50	ENSMUST00000068968.12	ENSMUSG00000055403.14	4933427D06Rik	chr6	lncRNA	RIKEN cDNA 4933427D06 gene
chr6	89118067;89121658	89121530;89122141	+	89118067	89122141	cassetteExon	0.5	100	100	ENSMUST00000203378.2	ENSMUSG00000090254.8	Gm1965	chr6	lncRNA	predicted gene 1965
chr6	89118067;89121658	89121544;89122141	+	89118067	89122141	cassetteExon	0.5	100	100	ENSMUST00000203378.2	ENSMUSG00000090254.8	Gm1965	chr6	lncRNA	predicted gene 1965
chr6	89118067;89121658	89121595;89122141	+	89118067	89122141	cassetteExon	0.5	100	100	ENSMUST00000203378.2	ENSMUSG00000090254.8	Gm1965	chr6	lncRNA	predicted gene 1965
chr6	89118067	89121530	+	89118067	89121544	A3SS	0.25	50	50	ENSMUST00000162900.8	ENSMUSG00000090254.8	Gm1965	chr6	lncRNA	predicted gene 1965
chr6	89118067	89121595	+	89118067	89121544	A3SS	0.25	50	50	ENSMUST00000162900.8	ENSMUSG00000090254.8	Gm1965	chr6	lncRNA	predicted gene 1965
chr6	89118067	89121595	+	89118067	89121530	A3SS	0.25	50	50	ENSMUST00000161362.8	ENSMUSG00000090254.8	Gm1965	chr6	lncRNA	predicted gene 1965
chr6	89246887	89250075	-	89246887	89251765	A5SS	0.5	50	50	ENSMUST00000203704.2	ENSMUSG00000107622.2	4930512J16Rik	chr6	lncRNA	RIKEN cDNA 4930512J16 gene
chr6	89308431	89309068	-	89308431;89308966	89308823;89309068	ES	0.5	50	50	ENSMUST00000163139.8	ENSMUSG00000030084.12	Plxna1	chr6	protein_coding	plexin A1
chr6	89312475	89317505	-	89312475;89314333	89314133;89317505	ES	0.5	50	50	ENSMUST00000163139.8	ENSMUSG00000030084.12	Plxna1	chr6	protein_coding	plexin A1
chr6	89299837	89300218	-	89299903	89300218	A3SS	0.5	50	50	ENSMUST00000163139.8	ENSMUSG00000030084.12	Plxna1	chr6	protein_coding	plexin A1
chr6	89396800;89444455	89444372;89544569	-	89396800	89544569	cassetteExon	0.5	100	100	ENSMUST00000113550.6	ENSMUSG00000030086.17	Chchd6	chr6	protein_coding	coiled-coil-helix-coiled-coil-helix domain containing 6
chr6	89546394	89551389	-	89546394	89551350	A5SS	0.5	50	50	ENSMUST00000113550.6	ENSMUSG00000030086.17	Chchd6	chr6	protein_coding	coiled-coil-helix-coiled-coil-helix domain containing 6
chr6	89638583	89640059	+	89638583	89642682	A3SS	0.5	50	50	ENSMUST00000101171.3	ENSMUSG00000000811.15	Txnrd3	chr6	protein_coding	thioredoxin reductase 3
chr6	89641585	89642682	+	89638583	89642682	A5SS	0.5	50	50	ENSMUST00000101171.3	ENSMUSG00000000811.15	Txnrd3	chr6	protein_coding	thioredoxin reductase 3
chr6	89684714;89687329	89687181;89690184	+	89684714	89690184	cassetteExon	0.5	100	100	ENSMUST00000228642.2	ENSMUSG00000096051.3	Vmn1r40	chr6	protein_coding	vomeronasal 1 receptor 40
chr6	89718088	89723433	+	89717930	89723433	A5SS	0.5	50	50	ENSMUST00000204949.3	ENSMUSG00000094586.5	Vmn1r41	chr6	protein_coding	vomeronasal 1 receptor 41
chr6	89723584	89724075	+	89723523	89724075	A5SS	0.5	50	50	ENSMUST00000227630.2	ENSMUSG00000094586.5	Vmn1r41	chr6	protein_coding	vomeronasal 1 receptor 41
chr6	89823539	89853243	-	89823539	89824974	5pMXE	0.5	50	50	ENSMUST00000226436.2	ENSMUSG00000068232.4	Vmn1r42	chr6	protein_coding	vomeronasal 1 receptor 42
chr6	89848408	89853243	-	89823539	89853243	A3SS	0.5	50	50	ENSMUST00000227279.2	ENSMUSG00000068232.4	Vmn1r42	chr6	protein_coding	vomeronasal 1 receptor 42
chr6	89848408	89853084	-	89848408	89849588	5pMXE	0.33	50	50	ENSMUST00000226741.2	ENSMUSG00000068231.6	Vmn1r43	chr6	protein_coding	vomeronasal 1 receptor 43
chr6	89848408	89853243	-	89848408	89849588	5pMXE	0.33	50	50	ENSMUST00000226741.2	ENSMUSG00000068231.6	Vmn1r43	chr6	protein_coding	vomeronasal 1 receptor 43
chr6	89848408	89853084	-	89848408	89853243	A5SS	0.33	50	50	ENSMUST00000228709.2	ENSMUSG00000068231.6	Vmn1r43	chr6	protein_coding	vomeronasal 1 receptor 43
chr6	89860667	89869120	+	89860667;89865666	89865439;89869120	ES	0.5	50	50	ENSMUST00000226345.2	ENSMUSG00000068234.8	Vmn1r44	chr6	protein_coding	vomeronasal 1 receptor 44
chr6	89863723	89865439	+	89860667	89865439	A5SS	0.5	50	50	ENSMUST00000226345.2	ENSMUSG00000068234.8	Vmn1r44	chr6	protein_coding	vomeronasal 1 receptor 44
chr6	89869250	89870225	+	89869184	89870225	A5SS	0.5	50	50	ENSMUST00000226345.2	ENSMUSG00000068234.8	Vmn1r44	chr6	protein_coding	vomeronasal 1 receptor 44
chr6	89911679	89917333	-	89911723	89917333	A3SS	0.5	50	50	ENSMUST00000054202.5	ENSMUSG00000044248.5	Vmn1r45	chr6	protein_coding	vomeronasal 1 receptor 45
chr6	89911723	89913621	-	89911723	89917333	A5SS	0.33	50	50	ENSMUST00000054202.5	ENSMUSG00000044248.5	Vmn1r45	chr6	protein_coding	vomeronasal 1 receptor 45
chr6	89911723	89917469	-	89911723	89917333	A5SS	0.33	50	50	ENSMUST00000054202.5	ENSMUSG00000044248.5	Vmn1r45	chr6	protein_coding	vomeronasal 1 receptor 45
chr6	89911723	89917469	-	89911723;89913724	89913621;89917469	ES	0.5	50	50	ENSMUST00000228662.2	ENSMUSG00000044248.5	Vmn1r45	chr6	protein_coding	vomeronasal 1 receptor 45
chr6	89946348;89946782	89946692;89951937	+	89946348	89951937	cassetteExon	0.5	100	100	ENSMUST00000205088.3	ENSMUSG00000061653.5	Vmn1r46	chr6	protein_coding	vomeronasal 1 receptor 46
chr6	89949259	89951937	+	89946348	89951937	A5SS	0.33	50	50	ENSMUST00000205088.3	ENSMUSG00000061653.5	Vmn1r46	chr6	protein_coding	vomeronasal 1 receptor 46
chr6	89946782;89949259	89949166;89951937	+	89946782	89951937	cassetteExon	0.5	100	100	ENSMUST00000226715.2	ENSMUSG00000061653.5	Vmn1r46	chr6	protein_coding	vomeronasal 1 receptor 46
chr6	89946348	89951937	+	89946348;89949259	89946692;89951937	ES	0.33	50	50	ENSMUST00000228231.2	ENSMUSG00000061653.5	Vmn1r46	chr6	protein_coding	vomeronasal 1 receptor 46
chr6	89946782	89951937	+	89949259	89951937	A5SS	0.33	50	50	ENSMUST00000228231.2	ENSMUSG00000061653.5	Vmn1r46	chr6	protein_coding	vomeronasal 1 receptor 46
chr6	89993183	89995196	+	89993183;89993883	89993825;89995196	ES	0.5	50	50	ENSMUST00000227811.2	ENSMUSG00000060724.3	Vmn1r47	chr6	protein_coding	vomeronasal 1 receptor 47
chr6	89993883	89995271	+	89993883	89995196	A3SS	0.5	50	50	ENSMUST00000227811.2	ENSMUSG00000060724.3	Vmn1r47	chr6	protein_coding	vomeronasal 1 receptor 47
chr6	89993183	89995196	+	89993183	89993825	A3SS&ES	0.5	50	50	ENSMUST00000228680.2	ENSMUSG00000060724.3	Vmn1r47	chr6	protein_coding	vomeronasal 1 receptor 47
chr6	90054951	90055290	-	90050031	90055290	A3SS	0.5	50	50	ENSMUST00000203791.3	ENSMUSG00000095932.4	Vmn1r49	chr6	protein_coding	vomeronasal 1, receptor 49
chr6	90078604;90083306	90083126;90084226	+	90078604	90084226	cassetteExon	0.5	100	100	ENSMUST00000089417.8	ENSMUSG00000094553.4	Vmn1r50	chr6	protein_coding	vomeronasal 1 receptor 50
chr6	90099654	90101643	+	90099654	90101639	A3SS	0.5	50	50	ENSMUST00000227766.2	ENSMUSG00000062818.8	Vmn1r51	chr6	protein_coding	vomeronasal 1 receptor 51
chr6	90101747	90105408	+	90101747	90105215	A3SS	0.5	50	50	ENSMUST00000227766.2	ENSMUSG00000062818.8	Vmn1r51	chr6	protein_coding	vomeronasal 1 receptor 51
chr6	90099793	90101639	+	90099654	90101639	A5SS	0.5	50	50	ENSMUST00000227766.2	ENSMUSG00000062818.8	Vmn1r51	chr6	protein_coding	vomeronasal 1 receptor 51
chr6	90099793	90101643	+	90099654	90101643	A5SS	0.5	50	50	ENSMUST00000227109.2	ENSMUSG00000062818.8	Vmn1r51	chr6	protein_coding	vomeronasal 1 receptor 51
chr6	90099793	90101643	+	90099793	90101639	A3SS	0.5	50	50	ENSMUST00000226977.2	ENSMUSG00000062818.8	Vmn1r51	chr6	protein_coding	vomeronasal 1 receptor 51
chr6	90127323	90129292	+	90123451	90129292	A5SS	0.5	50	50	ENSMUST00000237197.2	ENSMUSG00000061843.6	Vmn1r-ps32	chr6	transcribed_unprocessed_pseudogene	vomeronasal 1 receptor, pseudogene 32
chr6	90153115;90153484	90153235;90154832	+	90153115	90154832	cassetteExon	0.5	100	100	ENSMUST00000227100.2	ENSMUSG00000060816.4	Vmn1r52	chr6	protein_coding	vomeronasal 1 receptor 52
chr6	90154918	90155241	+	90154918	90156336	A3SS	0.16	50	50	ENSMUST00000227100.2	ENSMUSG00000060816.4	Vmn1r52	chr6	protein_coding	vomeronasal 1 receptor 52
chr6	90154918	90155258	+	90154918	90156336	A3SS	0.16	50	50	ENSMUST00000227100.2	ENSMUSG00000060816.4	Vmn1r52	chr6	protein_coding	vomeronasal 1 receptor 52
chr6	90154918	90155297	+	90154918	90156336	A3SS	0.16	50	50	ENSMUST00000227100.2	ENSMUSG00000060816.4	Vmn1r52	chr6	protein_coding	vomeronasal 1 receptor 52
chr6	90154918	90155667	+	90154918	90156336	A3SS	0.16	50	50	ENSMUST00000227100.2	ENSMUSG00000060816.4	Vmn1r52	chr6	protein_coding	vomeronasal 1 receptor 52
chr6	90154918	90156273	+	90154918	90156336	A3SS	0.16	50	50	ENSMUST00000227100.2	ENSMUSG00000060816.4	Vmn1r52	chr6	protein_coding	vomeronasal 1 receptor 52
chr6	90154918	90156273	+	90154918;90155389	90155241;90156273	ES	0.5	50	50	ENSMUST00000228385.2	ENSMUSG00000060816.4	Vmn1r52	chr6	protein_coding	vomeronasal 1 receptor 52
chr6	90154918	90155258	+	90154918	90155241	A3SS	0.16	50	50	ENSMUST00000228385.2	ENSMUSG00000060816.4	Vmn1r52	chr6	protein_coding	vomeronasal 1 receptor 52
chr6	90154918	90155297	+	90154918	90155241	A3SS	0.16	50	50	ENSMUST00000228385.2	ENSMUSG00000060816.4	Vmn1r52	chr6	protein_coding	vomeronasal 1 receptor 52
chr6	90154918	90155667	+	90154918	90155241	A3SS&ES	0.16	50	50	ENSMUST00000228385.2	ENSMUSG00000060816.4	Vmn1r52	chr6	protein_coding	vomeronasal 1 receptor 52
chr6	90155389	90155667	+	90155389	90156273	A3SS	0.5	50	50	ENSMUST00000228385.2	ENSMUSG00000060816.4	Vmn1r52	chr6	protein_coding	vomeronasal 1 receptor 52
chr6	90154918;90155389	90155258;90156273	+	90154918	90156273	cassetteExon	0.5	100	100	ENSMUST00000227578.2	ENSMUSG00000060816.4	Vmn1r52	chr6	protein_coding	vomeronasal 1 receptor 52
chr6	90154918;90155389	90155297;90156273	+	90154918	90156273	cassetteExon	0.5	100	100	ENSMUST00000227578.2	ENSMUSG00000060816.4	Vmn1r52	chr6	protein_coding	vomeronasal 1 receptor 52
chr6	90154918	90155667	+	90154918	90156273	A3SS	0.16	50	50	ENSMUST00000227578.2	ENSMUSG00000060816.4	Vmn1r52	chr6	protein_coding	vomeronasal 1 receptor 52
chr6	90154918	90155667	+	90154918;90155389	90155241;90155667	ES	0.5	50	50	ENSMUST00000226520.2	ENSMUSG00000060816.4	Vmn1r52	chr6	protein_coding	vomeronasal 1 receptor 52
chr6	90154918	90156273	+	90154918	90155241	A3SS&ES	0.16	50	50	ENSMUST00000226520.2	ENSMUSG00000060816.4	Vmn1r52	chr6	protein_coding	vomeronasal 1 receptor 52
chr6	90154918	90155667	+	90154918;90155389	90155297;90155667	ES	0.5	50	50	ENSMUST00000228394.2	ENSMUSG00000060816.4	Vmn1r52	chr6	protein_coding	vomeronasal 1 receptor 52
chr6	90154918	90155258	+	90154918	90155297	A3SS	0.16	50	50	ENSMUST00000228394.2	ENSMUSG00000060816.4	Vmn1r52	chr6	protein_coding	vomeronasal 1 receptor 52
chr6	90154918	90156273	+	90154918	90155297	A3SS&ES	0.16	50	50	ENSMUST00000228394.2	ENSMUSG00000060816.4	Vmn1r52	chr6	protein_coding	vomeronasal 1 receptor 52
chr6	90154918	90155667	+	90154918;90155389	90155258;90155667	ES	0.5	50	50	ENSMUST00000227893.2	ENSMUSG00000060816.4	Vmn1r52	chr6	protein_coding	vomeronasal 1 receptor 52
chr6	90154918	90156273	+	90154918	90155258	A3SS&ES	0.16	50	50	ENSMUST00000227893.2	ENSMUSG00000060816.4	Vmn1r52	chr6	protein_coding	vomeronasal 1 receptor 52
chr6	90279363	90279742	+	90278937	90279742	A5SS	0.5	50	50	ENSMUST00000054799.9	ENSMUSG00000049694.14	BC048671	chr6	protein_coding	cDNA sequence BC048671
chr6	90322481	90323288	+	90322379	90323288	A5SS	0.5	50	50	ENSMUST00000046128.12	ENSMUSG00000034456.16	Uroc1	chr6	protein_coding	urocanase domain containing 1
chr6	90358882	90361150	+	90359502	90361150	A5SS	0.5	50	50	ENSMUST00000075117.10	ENSMUSG00000034430.17	Zxdc	chr6	protein_coding	ZXD family zinc finger C
chr6	90386632;90389258	90389129;90389335	-	90386632	90389335	cassetteExon	0.5	100	100	ENSMUST00000153843.8	ENSMUSG00000048794.15	Cfap100	chr6	protein_coding	cilia and flagella associated protein 100
chr6	90391010;90392874	90392682;90394592	-	90391010	90394592	cassetteExon	0.5	100	100	ENSMUST00000153843.8	ENSMUSG00000048794.15	Cfap100	chr6	protein_coding	cilia and flagella associated protein 100
chr6	90394692;90396435	90396358;90405361	-	90394692	90405361	cassetteExon	0.5	100	100	ENSMUST00000153843.8	ENSMUSG00000048794.15	Cfap100	chr6	protein_coding	cilia and flagella associated protein 100
chr6	90391022	90394592	-	90391010	90394592	A3SS	0.33	50	50	ENSMUST00000153843.8	ENSMUSG00000048794.15	Cfap100	chr6	protein_coding	cilia and flagella associated protein 100
chr6	90404525	90405361	-	90394692	90405361	A3SS	0.25	50	50	ENSMUST00000153843.8	ENSMUSG00000048794.15	Cfap100	chr6	protein_coding	cilia and flagella associated protein 100
chr6	90404923	90405361	-	90394692	90405361	A3SS	0.25	50	50	ENSMUST00000153843.8	ENSMUSG00000048794.15	Cfap100	chr6	protein_coding	cilia and flagella associated protein 100
chr6	90392874	90394592	-	90391022	90394592	A3SS	0.33	50	50	ENSMUST00000062750.12	ENSMUSG00000048794.15	Cfap100	chr6	protein_coding	cilia and flagella associated protein 100
chr6	90404525	90405361	-	90396435	90405361	A3SS	0.25	50	50	ENSMUST00000062750.12	ENSMUSG00000048794.15	Cfap100	chr6	protein_coding	cilia and flagella associated protein 100
chr6	90404923	90405361	-	90396435	90405361	A3SS	0.25	50	50	ENSMUST00000062750.12	ENSMUSG00000048794.15	Cfap100	chr6	protein_coding	cilia and flagella associated protein 100
chr6	90398382	90404420	-	90396438	90404420	A3SS	0.33	50	50	ENSMUST00000165673.5	ENSMUSG00000048794.15	Cfap100	chr6	protein_coding	cilia and flagella associated protein 100
chr6	90403631	90404420	-	90396438	90404420	A3SS	0.33	50	50	ENSMUST00000165673.5	ENSMUSG00000048794.15	Cfap100	chr6	protein_coding	cilia and flagella associated protein 100
chr6	90404923	90405361	-	90404525	90405361	A3SS	0.25	50	50	ENSMUST00000165673.5	ENSMUSG00000048794.15	Cfap100	chr6	protein_coding	cilia and flagella associated protein 100
chr6	90403631	90404420	-	90398382	90404420	A3SS	0.5	50	50	ENSMUST00000134224.8	ENSMUSG00000048794.15	Cfap100	chr6	protein_coding	cilia and flagella associated protein 100
chr6	90439707;90441825	90441619;90443402	+	90439707	90443402	cassetteExon	0.5	100	100	ENSMUST00000032174.12	ENSMUSG00000030087.12	Klf15	chr6	protein_coding	Kruppel-like factor 15
chr6	90444505	90451065	+	90444505	90451102	A3SS	0.5	50	50	ENSMUST00000032174.12	ENSMUSG00000030087.12	Klf15	chr6	protein_coding	Kruppel-like factor 15
chr6	90442439	90443402	+	90439707	90443402	A5SS	0.33	50	50	ENSMUST00000032174.12	ENSMUSG00000030087.12	Klf15	chr6	protein_coding	Kruppel-like factor 15
chr6	90442439	90443402	+	90441825	90443402	A5SS	0.33	50	50	ENSMUST00000203039.3	ENSMUSG00000030087.12	Klf15	chr6	protein_coding	Kruppel-like factor 15
chr6	90463513	90534184	+	90463513	90495941	3pMXE	0.5	50	50	ENSMUST00000203807.2	ENSMUSG00000108111.2	Gm45901	chr6	lncRNA	predicted gene 45901
chr6	90527879	90534184	+	90463513	90534184	A5SS	0.33	50	50	ENSMUST00000127199.2	ENSMUSG00000030088.16	Aldh1l1	chr6	protein_coding	aldehyde dehydrogenase 1 family, member L1
chr6	90527952	90534184	+	90463513	90534184	A5SS	0.33	50	50	ENSMUST00000127199.2	ENSMUSG00000030088.16	Aldh1l1	chr6	protein_coding	aldehyde dehydrogenase 1 family, member L1
chr6	90527879	90534184	+	90527952	90534184	A5SS	0.33	50	50	ENSMUST00000130418.8	ENSMUSG00000030088.16	Aldh1l1	chr6	protein_coding	aldehyde dehydrogenase 1 family, member L1
chr6	90544818	90546455	+	90543746	90546455	A5SS	0.5	50	50	ENSMUST00000130418.8	ENSMUSG00000030088.16	Aldh1l1	chr6	protein_coding	aldehyde dehydrogenase 1 family, member L1
chr6	90596627	90601794	+	90589163	90601794	A5SS	0.5	50	50	ENSMUST00000044019.16	ENSMUSG00000030089.16	Slc41a3	chr6	protein_coding	solute carrier family 41, member 3
chr6	90671832	90713559	-	90671832	90693190	5pMXE	0.14	50	50	ENSMUST00000101153.10	ENSMUSG00000034312.16	Iqsec1	chr6	protein_coding	IQ motif and Sec7 domain 1
chr6	90671832	90734431	-	90671832	90693190	5pMXE	0.14	50	50	ENSMUST00000101153.10	ENSMUSG00000034312.16	Iqsec1	chr6	protein_coding	IQ motif and Sec7 domain 1
chr6	90671832	90740737	-	90671832	90693190	5pMXE	0.14	50	50	ENSMUST00000101153.10	ENSMUSG00000034312.16	Iqsec1	chr6	protein_coding	IQ motif and Sec7 domain 1
chr6	90671832	90758803	-	90671832	90693190	5pMXE	0.14	50	50	ENSMUST00000101153.10	ENSMUSG00000034312.16	Iqsec1	chr6	protein_coding	IQ motif and Sec7 domain 1
chr6	90671832	90764100	-	90671832	90693190	5pMXE	0.14	50	50	ENSMUST00000101153.10	ENSMUSG00000034312.16	Iqsec1	chr6	protein_coding	IQ motif and Sec7 domain 1
chr6	90671832	90786750	-	90671832	90693190	5pMXE	0.14	50	50	ENSMUST00000101153.10	ENSMUSG00000034312.16	Iqsec1	chr6	protein_coding	IQ motif and Sec7 domain 1
chr6	90639937	90641004	-	90638007	90641004	A3SS	0.5	50	50	ENSMUST00000101153.10	ENSMUSG00000034312.16	Iqsec1	chr6	protein_coding	IQ motif and Sec7 domain 1
chr6	90639937	90644882	-	90641053	90644882	A3SS&ES	0.5	50	50	ENSMUST00000101153.10	ENSMUSG00000034312.16	Iqsec1	chr6	protein_coding	IQ motif and Sec7 domain 1
chr6	90639937	90644882	-	90639937;90641053	90641004;90644882	ES	0.5	50	50	ENSMUST00000101151.10	ENSMUSG00000034312.16	Iqsec1	chr6	protein_coding	IQ motif and Sec7 domain 1
chr6	90671832	90713559	-	90671832	90786750	A5SS	0.14	50	50	ENSMUST00000101151.10	ENSMUSG00000034312.16	Iqsec1	chr6	protein_coding	IQ motif and Sec7 domain 1
chr6	90671832	90734431	-	90671832	90786750	A5SS	0.14	50	50	ENSMUST00000101151.10	ENSMUSG00000034312.16	Iqsec1	chr6	protein_coding	IQ motif and Sec7 domain 1
chr6	90671832	90740737	-	90671832	90786750	A5SS	0.14	50	50	ENSMUST00000101151.10	ENSMUSG00000034312.16	Iqsec1	chr6	protein_coding	IQ motif and Sec7 domain 1
chr6	90671832	90758803	-	90671832	90786750	A5SS	0.14	50	50	ENSMUST00000101151.10	ENSMUSG00000034312.16	Iqsec1	chr6	protein_coding	IQ motif and Sec7 domain 1
chr6	90671832	90764100	-	90671832	90786750	A5SS	0.14	50	50	ENSMUST00000101151.10	ENSMUSG00000034312.16	Iqsec1	chr6	protein_coding	IQ motif and Sec7 domain 1
chr6	90671832	90713559	-	90671832	90764100	A5SS	0.14	50	50	ENSMUST00000212100.2	ENSMUSG00000034312.16	Iqsec1	chr6	protein_coding	IQ motif and Sec7 domain 1
chr6	90671832	90734431	-	90671832	90764100	A5SS	0.14	50	50	ENSMUST00000212100.2	ENSMUSG00000034312.16	Iqsec1	chr6	protein_coding	IQ motif and Sec7 domain 1
chr6	90671832	90740737	-	90671832	90764100	A5SS	0.14	50	50	ENSMUST00000212100.2	ENSMUSG00000034312.16	Iqsec1	chr6	protein_coding	IQ motif and Sec7 domain 1
chr6	90671832	90758803	-	90671832	90764100	A5SS	0.14	50	50	ENSMUST00000212100.2	ENSMUSG00000034312.16	Iqsec1	chr6	protein_coding	IQ motif and Sec7 domain 1
chr6	90671832	90713559	-	90671832	90758803	A5SS	0.14	50	50	ENSMUST00000238821.2	ENSMUSG00000034312.16	Iqsec1	chr6	protein_coding	IQ motif and Sec7 domain 1
chr6	90671832	90734431	-	90671832	90758803	A5SS	0.14	50	50	ENSMUST00000238821.2	ENSMUSG00000034312.16	Iqsec1	chr6	protein_coding	IQ motif and Sec7 domain 1
chr6	90671832	90740737	-	90671832	90758803	A5SS	0.14	50	50	ENSMUST00000238821.2	ENSMUSG00000034312.16	Iqsec1	chr6	protein_coding	IQ motif and Sec7 domain 1
chr6	90671832	90713559	-	90671832	90740737	A5SS	0.14	50	50	ENSMUST00000156834.2	ENSMUSG00000034312.16	Iqsec1	chr6	protein_coding	IQ motif and Sec7 domain 1
chr6	90671832	90734431	-	90671832	90740737	A5SS	0.14	50	50	ENSMUST00000156834.2	ENSMUSG00000034312.16	Iqsec1	chr6	protein_coding	IQ motif and Sec7 domain 1
chr6	90671832	90734431	-	90671832	90713559	5pMXE	0.14	50	50	ENSMUST00000133492.2	ENSMUSG00000034312.16	Iqsec1	chr6	protein_coding	IQ motif and Sec7 domain 1
chr6	90990298	90992806	-	90991478	90992806	A3SS	0.33	50	50	ENSMUST00000032179.14	ENSMUSG00000030091.18	Nup210	chr6	protein_coding	nucleoporin 210
chr6	90990389	90992806	-	90991478	90992806	A3SS	0.33	50	50	ENSMUST00000032179.14	ENSMUSG00000030091.18	Nup210	chr6	protein_coding	nucleoporin 210
chr6	91030045	91030354	-	91020857	91030354	A3SS	0.5	50	50	ENSMUST00000032179.14	ENSMUSG00000030091.18	Nup210	chr6	protein_coding	nucleoporin 210
chr6	91037585	91039700	-	91037717	91039700	A3SS	0.5	50	50	ENSMUST00000032179.14	ENSMUSG00000030091.18	Nup210	chr6	protein_coding	nucleoporin 210
chr6	90998502	91000947	-	90998502	91002204	A5SS	0.5	50	50	ENSMUST00000032179.14	ENSMUSG00000030091.18	Nup210	chr6	protein_coding	nucleoporin 210
chr6	91042285	91042595	-	91042285	91046146	A5SS	0.5	50	50	ENSMUST00000032179.14	ENSMUSG00000030091.18	Nup210	chr6	protein_coding	nucleoporin 210
chr6	90990389	90992806	-	90990298	90992806	A3SS	0.33	50	50	ENSMUST00000142951.9	ENSMUSG00000030091.18	Nup210	chr6	protein_coding	nucleoporin 210
chr6	91142659	91144786	+	91142659;91143267	91143225;91144786	ES	0.5	50	50	ENSMUST00000041736.11	ENSMUSG00000034245.11	Hdac11	chr6	protein_coding	histone deacetylase 11
chr6	91143267	91145791	+	91143267;91144862	91144786;91145791	ES	0.5	50	50	ENSMUST00000041736.11	ENSMUSG00000034245.11	Hdac11	chr6	protein_coding	histone deacetylase 11
chr6	91143267	91143401	+	91143267	91144786	A3SS	0.33	50	50	ENSMUST00000041736.11	ENSMUSG00000034245.11	Hdac11	chr6	protein_coding	histone deacetylase 11
chr6	91143267	91145791	+	91143267	91143401	3pMXE	0.33	50	50	ENSMUST00000143621.8	ENSMUSG00000034245.11	Hdac11	chr6	protein_coding	histone deacetylase 11
chr6	91143267	91145791	+	91143267	91144786	3pMXE	0.33	50	50	ENSMUST00000127768.2	ENSMUSG00000034245.11	Hdac11	chr6	protein_coding	histone deacetylase 11
chr6	91142659;91143267	91143225;91145791	+	91142659;91144862	91144786;91145791	MXE	0.5	100	100	ENSMUST00000155007.2	ENSMUSG00000034245.11	Hdac11	chr6	protein_coding	histone deacetylase 11
chr6	91189882;91190714	91190614;91210045	+	91189882	91210045	cassetteExon	0.5	100	100	ENSMUST00000113498.9	ENSMUSG00000064080.13	Fbln2	chr6	protein_coding	fibulin 2
chr6	91189882;91192334	91192157;91210045	+	91189882	91210045	cassetteExon	0.5	100	100	ENSMUST00000113498.9	ENSMUSG00000064080.13	Fbln2	chr6	protein_coding	fibulin 2
chr6	91189882;91195874	91195810;91210045	+	91189882	91210045	cassetteExon	0.5	100	100	ENSMUST00000113498.9	ENSMUSG00000064080.13	Fbln2	chr6	protein_coding	fibulin 2
chr6	91234808;91236752	91236612;91240321	+	91234808	91240321	cassetteExon	0.5	100	100	ENSMUST00000113498.9	ENSMUSG00000064080.13	Fbln2	chr6	protein_coding	fibulin 2
chr6	91189882;91192334	91192157;91210045	+	91189882;91190714	91190614;91210045	MXE	0.5	100	100	ENSMUST00000153364.2	ENSMUSG00000064080.13	Fbln2	chr6	protein_coding	fibulin 2
chr6	91189882;91195874	91195810;91210045	+	91189882;91190714	91190614;91210045	MXE	0.5	100	100	ENSMUST00000153364.2	ENSMUSG00000064080.13	Fbln2	chr6	protein_coding	fibulin 2
chr6	91189882;91195874	91195810;91210045	+	91189882;91192334	91192157;91210045	MXE	0.5	100	100	ENSMUST00000132021.2	ENSMUSG00000064080.13	Fbln2	chr6	protein_coding	fibulin 2
chr6	91189882	91192157	+	91189882	91190614	3pMXE	0.25	50	50	ENSMUST00000203406.2	ENSMUSG00000064080.13	Fbln2	chr6	protein_coding	fibulin 2
chr6	91189882	91195810	+	91189882	91190614	3pMXE	0.25	50	50	ENSMUST00000203406.2	ENSMUSG00000064080.13	Fbln2	chr6	protein_coding	fibulin 2
chr6	91189882	91210045	+	91189882	91190614	3pMXE	0.25	50	50	ENSMUST00000203406.2	ENSMUSG00000064080.13	Fbln2	chr6	protein_coding	fibulin 2
chr6	91341116	91341907	-	91341116	91341939	A5SS	0.5	50	50	ENSMUST00000133092.3	ENSMUSG00000030093.8	Wnt7a	chr6	protein_coding	wingless-type MMTV integration site family, member 7A
chr6	91450880	91451230	+	91450880	91454227	A3SS	0.5	50	50	ENSMUST00000032183.6	ENSMUSG00000030095.11	Tmem43	chr6	protein_coding	transmembrane protein 43
chr6	91453844	91454227	+	91450880	91454227	A5SS	0.5	50	50	ENSMUST00000032183.6	ENSMUSG00000030095.11	Tmem43	chr6	protein_coding	transmembrane protein 43
chr6	91485577	91492688	-	91485577;91487640	91487439;91492688	ES	0.5	50	50	ENSMUST00000032182.5	ENSMUSG00000030094.9	Xpc	chr6	protein_coding	xeroderma pigmentosum, complementation group C
chr6	91661289	91700263	+	91661289;91676013	91675970;91700263	ES	0.25	50	50	ENSMUST00000032185.9	ENSMUSG00000030096.9	Slc6a6	chr6	protein_coding	solute carrier family 6 (neurotransmitter transporter, taurine), member 6
chr6	91718033	91721898	+	91718033;91718283	91718159;91721898	ES	0.5	50	50	ENSMUST00000032185.9	ENSMUSG00000030096.9	Slc6a6	chr6	protein_coding	solute carrier family 6 (neurotransmitter transporter, taurine), member 6
chr6	91676013;91688609	91688493;91700263	+	91676013	91700263	cassetteExon	0.5	100	100	ENSMUST00000032185.9	ENSMUSG00000030096.9	Slc6a6	chr6	protein_coding	solute carrier family 6 (neurotransmitter transporter, taurine), member 6
chr6	91678806	91700263	+	91676013	91700263	A5SS	0.25	50	50	ENSMUST00000032185.9	ENSMUSG00000030096.9	Slc6a6	chr6	protein_coding	solute carrier family 6 (neurotransmitter transporter, taurine), member 6
chr6	91661289	91700263	+	91661289	91675970	A3SS&ES	0.5	50	50	ENSMUST00000205443.2	ENSMUSG00000030096.9	Slc6a6	chr6	protein_coding	solute carrier family 6 (neurotransmitter transporter, taurine), member 6
chr6	91676013	91688493	+	91676013	91712072	A3SS	0.33	50	50	ENSMUST00000205443.2	ENSMUSG00000030096.9	Slc6a6	chr6	protein_coding	solute carrier family 6 (neurotransmitter transporter, taurine), member 6
chr6	91676013	91700263	+	91676013	91712072	A3SS	0.33	50	50	ENSMUST00000205443.2	ENSMUSG00000030096.9	Slc6a6	chr6	protein_coding	solute carrier family 6 (neurotransmitter transporter, taurine), member 6
chr6	91703227	91712072	+	91676013	91712072	A5SS	0.5	50	50	ENSMUST00000205443.2	ENSMUSG00000030096.9	Slc6a6	chr6	protein_coding	solute carrier family 6 (neurotransmitter transporter, taurine), member 6
chr6	91678806	91700263	+	91688609	91700263	A5SS&ES	0.25	50	50	ENSMUST00000205480.2	ENSMUSG00000030096.9	Slc6a6	chr6	protein_coding	solute carrier family 6 (neurotransmitter transporter, taurine), member 6
chr6	91678806	91700263	+	91661289	91700263	A5SS	0.25	50	50	ENSMUST00000206545.2	ENSMUSG00000030096.9	Slc6a6	chr6	protein_coding	solute carrier family 6 (neurotransmitter transporter, taurine), member 6
chr6	91688609	91700263	+	91661289	91700263	A5SS	0.25	50	50	ENSMUST00000206545.2	ENSMUSG00000030096.9	Slc6a6	chr6	protein_coding	solute carrier family 6 (neurotransmitter transporter, taurine), member 6
chr6	91759440	91760551	-	91759440;91759886	91759764;91760551	ES	0.5	50	50	ENSMUST00000162300.8	ENSMUSG00000030098.16	Grip2	chr6	protein_coding	glutamate receptor interacting protein 2
chr6	91765425	91804004	-	91765425	91784245	5pMXE	0.33	50	50	ENSMUST00000162300.8	ENSMUSG00000030098.16	Grip2	chr6	protein_coding	glutamate receptor interacting protein 2
chr6	91764310;91764795	91764705;91764989	-	91764310	91764989	cassetteExon	0.5	100	100	ENSMUST00000162300.8	ENSMUSG00000030098.16	Grip2	chr6	protein_coding	glutamate receptor interacting protein 2
chr6	91749998	91750774	-	91749719	91750774	A3SS	0.5	50	50	ENSMUST00000162300.8	ENSMUSG00000030098.16	Grip2	chr6	protein_coding	glutamate receptor interacting protein 2
chr6	91763534	91764190	-	91763534	91764165	A5SS	0.5	50	50	ENSMUST00000162300.8	ENSMUSG00000030098.16	Grip2	chr6	protein_coding	glutamate receptor interacting protein 2
chr6	91765425	91773181	-	91765425	91784245	A5SS	0.33	50	50	ENSMUST00000162300.8	ENSMUSG00000030098.16	Grip2	chr6	protein_coding	glutamate receptor interacting protein 2
chr6	91765425	91773181	-	91765425	91804004	A5SS	0.33	50	50	ENSMUST00000162293.8	ENSMUSG00000030098.16	Grip2	chr6	protein_coding	glutamate receptor interacting protein 2
chr6	91922488	91926912	+	91922488;91926364	91926269;91926912	ES	0.5	50	50	ENSMUST00000205686.2	ENSMUSG00000034063.9	4930590J08Rik	chr6	protein_coding	RIKEN cDNA 4930590J08 gene
chr6	92126785	92131316	+	92126785;92129398	92129296;92131316	ES	0.5	50	50	ENSMUST00000113460.8	ENSMUSG00000005893.15	Nr2c2	chr6	protein_coding	nuclear receptor subfamily 2, group C, member 2
chr6	92141274	92150076	+	92141274	92144440	3pMXE	0.5	50	50	ENSMUST00000113460.8	ENSMUSG00000005893.15	Nr2c2	chr6	protein_coding	nuclear receptor subfamily 2, group C, member 2
chr6	92082346	92116761	+	92116007	92116761	A5SS&ES	0.5	50	50	ENSMUST00000113460.8	ENSMUSG00000005893.15	Nr2c2	chr6	protein_coding	nuclear receptor subfamily 2, group C, member 2
chr6	92122774	92126585	+	92116871	92126585	A5SS	0.5	50	50	ENSMUST00000113460.8	ENSMUSG00000005893.15	Nr2c2	chr6	protein_coding	nuclear receptor subfamily 2, group C, member 2
chr6	92140201	92141169	+	92140239	92141169	A5SS	0.5	50	50	ENSMUST00000113460.8	ENSMUSG00000005893.15	Nr2c2	chr6	protein_coding	nuclear receptor subfamily 2, group C, member 2
chr6	92167439;92167788	92167708;92168230	-	92167439	92168230	cassetteExon	0.5	100	100	ENSMUST00000014694.11	ENSMUSG00000014550.15	Rbsn	chr6	protein_coding	rabenosyn, RAB effector
chr6	92167233	92168230	-	92167439	92168230	A3SS	0.33	50	50	ENSMUST00000014694.11	ENSMUSG00000014550.15	Rbsn	chr6	protein_coding	rabenosyn, RAB effector
chr6	92176916	92178444	-	92176916	92178453	A5SS	0.5	50	50	ENSMUST00000014694.11	ENSMUSG00000014550.15	Rbsn	chr6	protein_coding	rabenosyn, RAB effector
chr6	92184166	92188687	-	92184166	92188569	A5SS	0.5	50	50	ENSMUST00000014694.11	ENSMUSG00000014550.15	Rbsn	chr6	protein_coding	rabenosyn, RAB effector
chr6	92188882	92191218	-	92188882	92191692	A5SS	0.5	50	50	ENSMUST00000014694.11	ENSMUSG00000014550.15	Rbsn	chr6	protein_coding	rabenosyn, RAB effector
chr6	92167788	92168230	-	92167233	92168230	A3SS	0.33	50	50	ENSMUST00000124635.7	ENSMUSG00000014550.15	Rbsn	chr6	protein_coding	rabenosyn, RAB effector
chr6	92171011	92175165	-	92168334	92175165	A3SS	0.5	50	50	ENSMUST00000141332.2	ENSMUSG00000014550.15	Rbsn	chr6	protein_coding	rabenosyn, RAB effector
chr6	92168334	92170110	-	92168334	92175165	A5SS	0.5	50	50	ENSMUST00000141332.2	ENSMUSG00000014550.15	Rbsn	chr6	protein_coding	rabenosyn, RAB effector
chr6	92435639	92682327	-	92435639	92544285	5pMXE	0.25	50	50	ENSMUST00000113447.8	ENSMUSG00000030020.14	Prickle2	chr6	protein_coding	prickle planar cell polarity protein 2
chr6	92435639	92457806	-	92435639	92544285	A5SS	0.25	50	50	ENSMUST00000113447.8	ENSMUSG00000030020.14	Prickle2	chr6	protein_coding	prickle planar cell polarity protein 2
chr6	92435639	92511597	-	92435639	92544285	A5SS	0.25	50	50	ENSMUST00000113447.8	ENSMUSG00000030020.14	Prickle2	chr6	protein_coding	prickle planar cell polarity protein 2
chr6	92435639	92457806	-	92435639	92682327	A5SS	0.25	50	50	ENSMUST00000032093.12	ENSMUSG00000030020.14	Prickle2	chr6	protein_coding	prickle planar cell polarity protein 2
chr6	92435639	92511597	-	92435639	92682327	A5SS	0.25	50	50	ENSMUST00000032093.12	ENSMUSG00000030020.14	Prickle2	chr6	protein_coding	prickle planar cell polarity protein 2
chr6	92435639	92457806	-	92435639	92511597	A5SS	0.25	50	50	ENSMUST00000113446.8	ENSMUSG00000030020.14	Prickle2	chr6	protein_coding	prickle planar cell polarity protein 2
chr6	92903551	92914228	-	92889893	92914228	A3SS	0.5	50	50	ENSMUST00000113438.8	ENSMUSG00000030022.15	Adamts9	chr6	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 9
chr6	93215325	93248638	+	93215325;93248124	93247934;93248638	ES	0.5	50	50	ENSMUST00000204449.3	ENSMUSG00000097462.8	9530026P05Rik	chr6	lncRNA	RIKEN cDNA 9530026P05 gene
chr6	92917790;93084140	93084048;93169090	+	92917790	93169090	cassetteExon	0.5	100	100	ENSMUST00000204449.3	ENSMUSG00000097462.8	9530026P05Rik	chr6	lncRNA	RIKEN cDNA 9530026P05 gene
chr6	93169184;93213887	93213633;93214955	+	93169184	93214955	cassetteExon	0.5	100	100	ENSMUST00000204449.3	ENSMUSG00000097462.8	9530026P05Rik	chr6	lncRNA	RIKEN cDNA 9530026P05 gene
chr6	93215325;93231878	93231695;93247934	+	93215325	93247934	cassetteExon	0.5	100	100	ENSMUST00000204449.3	ENSMUSG00000097462.8	9530026P05Rik	chr6	lncRNA	RIKEN cDNA 9530026P05 gene
chr6	92917790	92937431	+	92917790	93169090	A3SS	0.25	50	50	ENSMUST00000204449.3	ENSMUSG00000097462.8	9530026P05Rik	chr6	lncRNA	RIKEN cDNA 9530026P05 gene
chr6	92917790	92995511	+	92917790	93169090	A3SS	0.25	50	50	ENSMUST00000204449.3	ENSMUSG00000097462.8	9530026P05Rik	chr6	lncRNA	RIKEN cDNA 9530026P05 gene
chr6	92917790;92937582	92937431;93084048	+	92917790	93084048	cassetteExon	0.5	100	100	ENSMUST00000181121.8	ENSMUSG00000097462.8	9530026P05Rik	chr6	lncRNA	RIKEN cDNA 9530026P05 gene
chr6	92917790;92995572	92995511;93084048	+	92917790	93084048	cassetteExon	0.5	100	100	ENSMUST00000181121.8	ENSMUSG00000097462.8	9530026P05Rik	chr6	lncRNA	RIKEN cDNA 9530026P05 gene
chr6	93084140	93088052	+	93084140	93169090	A3SS	0.25	50	50	ENSMUST00000181121.8	ENSMUSG00000097462.8	9530026P05Rik	chr6	lncRNA	RIKEN cDNA 9530026P05 gene
chr6	93084140	93088057	+	93084140	93169090	A3SS	0.25	50	50	ENSMUST00000181121.8	ENSMUSG00000097462.8	9530026P05Rik	chr6	lncRNA	RIKEN cDNA 9530026P05 gene
chr6	93084140	93120070	+	93084140	93169090	A3SS	0.25	50	50	ENSMUST00000181121.8	ENSMUSG00000097462.8	9530026P05Rik	chr6	lncRNA	RIKEN cDNA 9530026P05 gene
chr6	93084140	93120070	+	93084140	93088052	3pMXE	0.25	50	50	ENSMUST00000205093.3	ENSMUSG00000097462.8	9530026P05Rik	chr6	lncRNA	RIKEN cDNA 9530026P05 gene
chr6	92917790;92995572	92995511;93084048	+	92917790;92937582	92937431;93084048	MXE	0.5	100	100	ENSMUST00000205093.3	ENSMUSG00000097462.8	9530026P05Rik	chr6	lncRNA	RIKEN cDNA 9530026P05 gene
chr6	93084140	93088057	+	93084140	93088052	A3SS	0.25	50	50	ENSMUST00000205093.3	ENSMUSG00000097462.8	9530026P05Rik	chr6	lncRNA	RIKEN cDNA 9530026P05 gene
chr6	93084140	93120070	+	93084140	93088057	3pMXE	0.25	50	50	ENSMUST00000181840.4	ENSMUSG00000097462.8	9530026P05Rik	chr6	lncRNA	RIKEN cDNA 9530026P05 gene
chr6	93215325	93231695	+	93215325	93248638	A3SS	0.33	50	50	ENSMUST00000204609.2	ENSMUSG00000097462.8	9530026P05Rik	chr6	lncRNA	RIKEN cDNA 9530026P05 gene
chr6	93663856	93674175	-	93663856;93671156	93670989;93674175	ES	0.25	50	50	ENSMUST00000089317.12	ENSMUSG00000045095.17	Magi1	chr6	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 1
chr6	93678362	93684985	-	93678362;93681341	93681258;93684985	ES	0.5	50	50	ENSMUST00000089317.12	ENSMUSG00000045095.17	Magi1	chr6	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 1
chr6	93737746	93750588	-	93737746;93746524	93746489;93750588	ES	0.5	50	50	ENSMUST00000089317.12	ENSMUSG00000045095.17	Magi1	chr6	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 1
chr6	93655983;93657858	93657770;93659933	-	93655983	93659933	cassetteExon	0.5	100	100	ENSMUST00000089317.12	ENSMUSG00000045095.17	Magi1	chr6	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 1
chr6	93671189	93674175	-	93671156	93674175	A3SS	0.25	50	50	ENSMUST00000089317.12	ENSMUSG00000045095.17	Magi1	chr6	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 1
chr6	93671192	93674175	-	93671156	93674175	A3SS	0.25	50	50	ENSMUST00000089317.12	ENSMUSG00000045095.17	Magi1	chr6	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 1
chr6	93685198	93694221	-	93685201	93694221	A3SS	0.5	50	50	ENSMUST00000089317.12	ENSMUSG00000045095.17	Magi1	chr6	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 1
chr6	93685198	93722415	-	93694252	93722415	A3SS&ES	0.5	50	50	ENSMUST00000089317.12	ENSMUSG00000045095.17	Magi1	chr6	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 1
chr6	94214423	94259991	-	93920301	94259991	A3SS	0.5	50	50	ENSMUST00000089317.12	ENSMUSG00000045095.17	Magi1	chr6	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 1
chr6	93792806	93889344	-	93792806	93920185	A5SS	0.2	50	50	ENSMUST00000089317.12	ENSMUSG00000045095.17	Magi1	chr6	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 1
chr6	93792806	93889864	-	93792806	93920185	A5SS	0.2	50	50	ENSMUST00000089317.12	ENSMUSG00000045095.17	Magi1	chr6	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 1
chr6	93792806	93890186	-	93792806	93920185	A5SS	0.2	50	50	ENSMUST00000089317.12	ENSMUSG00000045095.17	Magi1	chr6	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 1
chr6	93792806	93890305	-	93792806	93920185	A5SS	0.2	50	50	ENSMUST00000089317.12	ENSMUSG00000045095.17	Magi1	chr6	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 1
chr6	93685198	93722415	-	93685198;93694252	93694221;93722415	ES	0.5	50	50	ENSMUST00000055224.15	ENSMUSG00000045095.17	Magi1	chr6	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 1
chr6	93663856;93671189	93670989;93674175	-	93663856	93674175	cassetteExon	0.5	100	100	ENSMUST00000055224.15	ENSMUSG00000045095.17	Magi1	chr6	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 1
chr6	93663856;93671192	93670989;93674175	-	93663856	93674175	cassetteExon	0.5	100	100	ENSMUST00000055224.15	ENSMUSG00000045095.17	Magi1	chr6	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 1
chr6	93671189	93674175	-	93671192	93674175	A3SS	0.25	50	50	ENSMUST00000204347.3	ENSMUSG00000045095.17	Magi1	chr6	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 1
chr6	93792806	93889344	-	93792806	93890305	A5SS	0.2	50	50	ENSMUST00000093769.8	ENSMUSG00000045095.17	Magi1	chr6	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 1
chr6	93792806	93889864	-	93792806	93890305	A5SS	0.2	50	50	ENSMUST00000093769.8	ENSMUSG00000045095.17	Magi1	chr6	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 1
chr6	93792806	93890186	-	93792806	93890305	A5SS	0.2	50	50	ENSMUST00000093769.8	ENSMUSG00000045095.17	Magi1	chr6	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 1
chr6	93792806	93890186	-	93792806	93889864	5pMXE	0.2	50	50	ENSMUST00000204532.3	ENSMUSG00000045095.17	Magi1	chr6	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 1
chr6	93792806	93889344	-	93792806	93889864	A5SS	0.2	50	50	ENSMUST00000204532.3	ENSMUSG00000045095.17	Magi1	chr6	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 1
chr6	93792806	93890186	-	93792806	93889344	5pMXE	0.2	50	50	ENSMUST00000205116.3	ENSMUSG00000045095.17	Magi1	chr6	protein_coding	membrane associated guanylate kinase, WW and PDZ domain containing 1
chr6	94512749	94569393	+	94512749;94553359	94553315;94569393	ES	0.33	50	50	ENSMUST00000061118.11	ENSMUSG00000045100.12	Slc25a26	chr6	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26
chr6	94487842;94491022	94490786;94511125	+	94487842	94511125	cassetteExon	0.5	100	100	ENSMUST00000061118.11	ENSMUSG00000045100.12	Slc25a26	chr6	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26
chr6	94512749	94526021	+	94512749	94553315	A3SS	0.33	50	50	ENSMUST00000061118.11	ENSMUSG00000045100.12	Slc25a26	chr6	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26
chr6	94569462	94569718	+	94569462	94575361	A3SS	0.5	50	50	ENSMUST00000061118.11	ENSMUSG00000045100.12	Slc25a26	chr6	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26
chr6	94477642	94484495	+	94477438	94484495	A5SS	0.5	50	50	ENSMUST00000061118.11	ENSMUSG00000045100.12	Slc25a26	chr6	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26
chr6	94484688	94487733	+	94484651	94487733	A5SS	0.5	50	50	ENSMUST00000061118.11	ENSMUSG00000045100.12	Slc25a26	chr6	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26
chr6	94542004	94553315	+	94512749	94553315	A5SS	0.5	50	50	ENSMUST00000061118.11	ENSMUSG00000045100.12	Slc25a26	chr6	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26
chr6	94555311	94569393	+	94553359	94569393	A5SS	0.33	50	50	ENSMUST00000061118.11	ENSMUSG00000045100.12	Slc25a26	chr6	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26
chr6	94512749	94526021	+	94512749	94569393	A3SS	0.33	50	50	ENSMUST00000204235.3	ENSMUSG00000045100.12	Slc25a26	chr6	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26
chr6	94555311	94569393	+	94512749	94569393	A5SS	0.33	50	50	ENSMUST00000204235.3	ENSMUSG00000045100.12	Slc25a26	chr6	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26
chr6	94631902	94632227	-	94631902	94640908	A5SS	0.5	50	50	ENSMUST00000204645.3	ENSMUSG00000030029.15	Lrig1	chr6	protein_coding	leucine-rich repeats and immunoglobulin-like domains 1
chr6	94640979	94655574	-	94640979	94676443	A5SS	0.33	50	50	ENSMUST00000204645.3	ENSMUSG00000030029.15	Lrig1	chr6	protein_coding	leucine-rich repeats and immunoglobulin-like domains 1
chr6	94640979	94657559	-	94640979	94676443	A5SS	0.33	50	50	ENSMUST00000204645.3	ENSMUSG00000030029.15	Lrig1	chr6	protein_coding	leucine-rich repeats and immunoglobulin-like domains 1
chr6	94640979	94655574	-	94640979	94657559	A5SS	0.33	50	50	ENSMUST00000141014.8	ENSMUSG00000030029.15	Lrig1	chr6	protein_coding	leucine-rich repeats and immunoglobulin-like domains 1
chr6	95094955	95095504	+	95094329	95095504	A5SS	0.33	50	50	ENSMUST00000122938.8	ENSMUSG00000030031.15	Kbtbd8	chr6	protein_coding	kelch repeat and BTB (POZ) domain containing 8
chr6	95094955	95098720	+	95095714	95098720	A5SS&ES	0.5	50	50	ENSMUST00000122938.8	ENSMUSG00000030031.15	Kbtbd8	chr6	protein_coding	kelch repeat and BTB (POZ) domain containing 8
chr6	95095079	95095504	+	95094329	95095504	A5SS	0.33	50	50	ENSMUST00000122938.8	ENSMUSG00000030031.15	Kbtbd8	chr6	protein_coding	kelch repeat and BTB (POZ) domain containing 8
chr6	95094955	95098720	+	95094955;95095714	95095504;95098720	ES	0.5	50	50	ENSMUST00000032107.10	ENSMUSG00000030031.15	Kbtbd8	chr6	protein_coding	kelch repeat and BTB (POZ) domain containing 8
chr6	95095079	95095504	+	95094955	95095504	A5SS	0.33	50	50	ENSMUST00000032107.10	ENSMUSG00000030031.15	Kbtbd8	chr6	protein_coding	kelch repeat and BTB (POZ) domain containing 8
chr6	95274906	95304388	-	95274906;95293023	95292898;95304388	ES	0.33	50	50	ENSMUST00000162315.8	ENSMUSG00000068180.14	AY512915	chr6	lncRNA	cDNA sequence AY512915
chr6	95255038	95257514	-	95232786	95257514	A3SS	0.5	50	50	ENSMUST00000162315.8	ENSMUSG00000068180.14	AY512915	chr6	lncRNA	cDNA sequence AY512915
chr6	95270807	95274766	-	95257585	95274766	A3SS	0.5	50	50	ENSMUST00000162315.8	ENSMUSG00000068180.14	AY512915	chr6	lncRNA	cDNA sequence AY512915
chr6	95290656	95304388	-	95293023	95304388	A3SS&ES	0.33	50	50	ENSMUST00000162315.8	ENSMUSG00000068180.14	AY512915	chr6	lncRNA	cDNA sequence AY512915
chr6	95290656	95304388	-	95274906	95304388	A3SS	0.33	50	50	ENSMUST00000089303.13	ENSMUSG00000068180.14	AY512915	chr6	lncRNA	cDNA sequence AY512915
chr6	95566071	95620913	-	95566071	95571641	A5SS&ES	0.5	50	50	ENSMUST00000204224.3	ENSMUSG00000061838.8	Suclg2	chr6	protein_coding	succinate-Coenzyme A ligase, GDP-forming, beta subunit
chr6	95632580	95634375	-	95632580	95695670	A5SS	0.33	50	50	ENSMUST00000204224.3	ENSMUSG00000061838.8	Suclg2	chr6	protein_coding	succinate-Coenzyme A ligase, GDP-forming, beta subunit
chr6	95632580	95669468	-	95632580	95695670	A5SS	0.33	50	50	ENSMUST00000204224.3	ENSMUSG00000061838.8	Suclg2	chr6	protein_coding	succinate-Coenzyme A ligase, GDP-forming, beta subunit
chr6	95632580	95634375	-	95632580	95669468	A5SS	0.33	50	50	ENSMUST00000079847.8	ENSMUSG00000061838.8	Suclg2	chr6	protein_coding	succinate-Coenzyme A ligase, GDP-forming, beta subunit
chr6	96092735	96108714	+	96092735	96500296	A3SS	0.5	50	50	ENSMUST00000122120.8	ENSMUSG00000059187.13	Tafa1	chr6	protein_coding	TAFA chemokine like family member 1
chr6	96091887	96092615	+	96090567	96092615	A5SS	0.5	50	50	ENSMUST00000122120.8	ENSMUSG00000059187.13	Tafa1	chr6	protein_coding	TAFA chemokine like family member 1
chr6	97093023	97095583	-	97093023	97095842	A5SS	0.33	50	50	ENSMUST00000054344.11	ENSMUSG00000035245.13	Eogt	chr6	protein_coding	EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
chr6	97093023	97125152	-	97093023	97095842	A5SS&ES	0.33	50	50	ENSMUST00000054344.11	ENSMUSG00000035245.13	Eogt	chr6	protein_coding	EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
chr6	97124412	97124505	-	97124412	97124838	A5SS	0.33	50	50	ENSMUST00000054344.11	ENSMUSG00000035245.13	Eogt	chr6	protein_coding	EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
chr6	97124412	97125022	-	97124412	97124838	A5SS	0.33	50	50	ENSMUST00000054344.11	ENSMUSG00000035245.13	Eogt	chr6	protein_coding	EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
chr6	97124969	97125152	-	97093023	97125152	A3SS	0.5	50	50	ENSMUST00000135187.8	ENSMUSG00000035245.13	Eogt	chr6	protein_coding	EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
chr6	97093023	97095583	-	97093023	97125152	A5SS	0.33	50	50	ENSMUST00000135187.8	ENSMUSG00000035245.13	Eogt	chr6	protein_coding	EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
chr6	97124412	97125022	-	97124412	97124505	5pMXE	0.33	50	50	ENSMUST00000142553.8	ENSMUSG00000035245.13	Eogt	chr6	protein_coding	EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
chr6	97138467	97145049	-	97144366	97145049	A3SS&ES	0.5	50	50	ENSMUST00000095664.6	ENSMUSG00000030059.16	Tmf1	chr6	protein_coding	TATA element modulatory factor 1
chr6	97138491	97141010	-	97140636	97141010	A3SS&ES	0.5	50	50	ENSMUST00000095664.6	ENSMUSG00000030059.16	Tmf1	chr6	protein_coding	TATA element modulatory factor 1
chr6	97180555;97182308	97182064;97182494	-	97180555	97182494	cassetteExon	0.5	100	100	ENSMUST00000164744.8	ENSMUSG00000030061.17	Uba3	chr6	protein_coding	ubiquitin-like modifier activating enzyme 3
chr6	97180555;97182308	97182267;97182494	-	97180555	97182494	cassetteExon	0.5	100	100	ENSMUST00000164744.8	ENSMUSG00000030061.17	Uba3	chr6	protein_coding	ubiquitin-like modifier activating enzyme 3
chr6	97180555	97182267	-	97180555	97182064	A5SS	0.33	50	50	ENSMUST00000204056.2	ENSMUSG00000030061.17	Uba3	chr6	protein_coding	ubiquitin-like modifier activating enzyme 3
chr6	97180555	97182494	-	97182308	97182494	3pMXE	0.5	50	50	ENSMUST00000203215.2	ENSMUSG00000030061.17	Uba3	chr6	protein_coding	ubiquitin-like modifier activating enzyme 3
chr6	97301857	97302394	-	97300702	97302394	A3SS	0.5	50	50	ENSMUST00000113355.9	ENSMUSG00000030064.17	Frmd4b	chr6	protein_coding	FERM domain containing 4B
chr6	97287700	97288856	-	97287700	97300616	A5SS	0.5	50	50	ENSMUST00000113355.9	ENSMUSG00000030064.17	Frmd4b	chr6	protein_coding	FERM domain containing 4B
chr6	97300702	97301032	-	97300702	97302394	A5SS	0.5	50	50	ENSMUST00000113355.9	ENSMUSG00000030064.17	Frmd4b	chr6	protein_coding	FERM domain containing 4B
chr6	97373238	97373387	-	97373238	97389449	A5SS	0.5	50	50	ENSMUST00000113355.9	ENSMUSG00000030064.17	Frmd4b	chr6	protein_coding	FERM domain containing 4B
chr6	97400485	97408325	-	97400485	97505691	A5SS	0.25	50	50	ENSMUST00000113355.9	ENSMUSG00000030064.17	Frmd4b	chr6	protein_coding	FERM domain containing 4B
chr6	97400485	97436155	-	97400485	97505691	A5SS	0.25	50	50	ENSMUST00000113355.9	ENSMUSG00000030064.17	Frmd4b	chr6	protein_coding	FERM domain containing 4B
chr6	97400485	97464554	-	97400485	97505691	A5SS	0.25	50	50	ENSMUST00000113355.9	ENSMUSG00000030064.17	Frmd4b	chr6	protein_coding	FERM domain containing 4B
chr6	97400485	97464554	-	97400485	97436155	5pMXE	0.25	50	50	ENSMUST00000113359.8	ENSMUSG00000030064.17	Frmd4b	chr6	protein_coding	FERM domain containing 4B
chr6	97400485	97408325	-	97400485	97436155	A5SS	0.25	50	50	ENSMUST00000113359.8	ENSMUSG00000030064.17	Frmd4b	chr6	protein_coding	FERM domain containing 4B
chr6	97400485	97408325	-	97400485	97464554	A5SS	0.25	50	50	ENSMUST00000032146.14	ENSMUSG00000030064.17	Frmd4b	chr6	protein_coding	FERM domain containing 4B
chr6	97784248	97918011	+	97784248	97918014	A3SS	0.5	50	50	ENSMUST00000203884.3	ENSMUSG00000035158.16	Mitf	chr6	protein_coding	melanogenesis associated transcription factor
chr6	97980965	97983084	+	97980965	97983102	A3SS	0.5	50	50	ENSMUST00000203884.3	ENSMUSG00000035158.16	Mitf	chr6	protein_coding	melanogenesis associated transcription factor
chr6	97906894	97918014	+	97784248	97918014	A5SS	0.5	50	50	ENSMUST00000203884.3	ENSMUSG00000035158.16	Mitf	chr6	protein_coding	melanogenesis associated transcription factor
chr6	97968914	97970088	+	97918263	97970088	A5SS	0.5	50	50	ENSMUST00000203884.3	ENSMUSG00000035158.16	Mitf	chr6	protein_coding	melanogenesis associated transcription factor
chr6	97970147	97971342	+	97970315	97971342	A5SS	0.5	50	50	ENSMUST00000203884.3	ENSMUSG00000035158.16	Mitf	chr6	protein_coding	melanogenesis associated transcription factor
chr6	97971390	97973335	+	97971425	97973335	A5SS	0.5	50	50	ENSMUST00000203884.3	ENSMUSG00000035158.16	Mitf	chr6	protein_coding	melanogenesis associated transcription factor
chr6	98640987	98674443	-	98615133	98674443	A3SS	0.33	50	50	ENSMUST00000204186.2	ENSMUSG00000107614.2	Gm44196	chr6	lncRNA	predicted gene, 44196
chr6	98671569	98674443	-	98615133	98674443	A3SS	0.33	50	50	ENSMUST00000204186.2	ENSMUSG00000107614.2	Gm44196	chr6	lncRNA	predicted gene, 44196
chr6	98671569	98674443	-	98640987	98674443	A3SS	0.33	50	50	ENSMUST00000203852.2	ENSMUSG00000107614.2	Gm44196	chr6	lncRNA	predicted gene, 44196
chr6	99237380	99285305	-	99237380	99243308	5pMXE	0.5	50	50	ENSMUST00000113326.9	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	98916749;98918125	98917956;98918497	-	98916749	98918497	cassetteExon	0.5	100	100	ENSMUST00000113326.9	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	99139990;99211867	99211755;99237306	-	99139990	99237306	cassetteExon	0.5	100	100	ENSMUST00000113326.9	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	98922384	98922495	-	98922387	98922495	A3SS	0.5	50	50	ENSMUST00000113326.9	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	98984339	98986865	-	98980365	98986865	A3SS	0.5	50	50	ENSMUST00000113326.9	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	98987018	98992385	-	98987015	98992385	A3SS	0.5	50	50	ENSMUST00000113326.9	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	98992474	98993489	-	98992471	98993489	A3SS	0.5	50	50	ENSMUST00000113326.9	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	99053006	99139800	-	99052910	99139800	A3SS	0.33	50	50	ENSMUST00000113326.9	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	99129374	99139800	-	99052910	99139800	A3SS	0.33	50	50	ENSMUST00000113326.9	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	98980365	98980592	-	98980365	98986865	A5SS	0.5	50	50	ENSMUST00000113326.9	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	98993626	99004663	-	98993626	99052815	A5SS	0.2	50	50	ENSMUST00000113326.9	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	98993626	99005125	-	98993626	99052815	A5SS	0.2	50	50	ENSMUST00000113326.9	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	98993626	99005635	-	98993626	99052815	A5SS	0.2	50	50	ENSMUST00000113326.9	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	98993626	99021287	-	98993626	99052815	A5SS	0.2	50	50	ENSMUST00000113326.9	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	99139990	99225232	-	99139990	99237306	A5SS	0.33	50	50	ENSMUST00000113326.9	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	99129374	99139800	-	99053006	99139800	A3SS	0.33	50	50	ENSMUST00000113322.9	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	99053006	99073105	-	99053006	99139800	A5SS	0.5	50	50	ENSMUST00000113322.9	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	99412306	99499505	-	99412306	99497562	5pMXE	0.16	50	50	ENSMUST00000176565.8	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	99412306	99609218	-	99412306	99497562	5pMXE	0.16	50	50	ENSMUST00000176565.8	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	99412306	99413202	-	99412306	99497562	A5SS	0.16	50	50	ENSMUST00000176565.8	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	99412306	99422519	-	99412306	99497562	A5SS	0.16	50	50	ENSMUST00000176565.8	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	99412306	99497558	-	99412306	99497562	A5SS	0.16	50	50	ENSMUST00000176565.8	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	98993626	99005635	-	98993626	99005125	5pMXE	0.2	50	50	ENSMUST00000177437.8	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	98993626	99021287	-	98993626	99005125	5pMXE	0.2	50	50	ENSMUST00000177437.8	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	98993626	99004663	-	98993626	99005125	A5SS	0.2	50	50	ENSMUST00000177437.8	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	98918618	98921580	-	98912401	98921580	A3SS	0.5	50	50	ENSMUST00000113329.10	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	98912401	98916680	-	98912401	98921580	A5SS	0.5	50	50	ENSMUST00000113329.10	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	98993626	99021287	-	98993626	99005635	5pMXE	0.2	50	50	ENSMUST00000154163.9	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	98993626	99004663	-	98993626	99005635	A5SS	0.2	50	50	ENSMUST00000154163.9	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	98993626	99004663	-	98993626	99021287	A5SS	0.2	50	50	ENSMUST00000123992.8	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	99139990	99211755	-	99139990	99225232	A5SS	0.33	50	50	ENSMUST00000177208.2	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	99412306	99499505	-	99412306	99497558	5pMXE	0.16	50	50	ENSMUST00000177227.8	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	99412306	99609218	-	99412306	99497558	5pMXE	0.16	50	50	ENSMUST00000177227.8	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	99412306	99413202	-	99412306	99497558	A5SS	0.16	50	50	ENSMUST00000177227.8	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	99412306	99422519	-	99412306	99497558	A5SS	0.16	50	50	ENSMUST00000177227.8	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	99412306	99609218	-	99412306	99499505	5pMXE	0.16	50	50	ENSMUST00000177235.8	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	99412306	99413202	-	99412306	99499505	A5SS	0.16	50	50	ENSMUST00000177235.8	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	99412306	99422519	-	99412306	99499505	A5SS	0.16	50	50	ENSMUST00000177235.8	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	99412306	99422519	-	99412306	99413202	5pMXE	0.16	50	50	ENSMUST00000176105.2	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	99412306	99609218	-	99412306	99413202	5pMXE	0.16	50	50	ENSMUST00000176105.2	ENSMUSG00000030067.18	Foxp1	chr6	protein_coding	forkhead box P1
chr6	99604014	99609218	-	99412306	99609218	A3SS	0.5	50	50	ENSMUST00000155466.2	ENSMUSG00000030068.5	Gm20696	chr6	protein_coding	predicted gene 20696
chr6	99617671	99628680	-	99609373	99628680	A3SS	0.5	50	50	ENSMUST00000155466.2	ENSMUSG00000030068.5	Gm20696	chr6	protein_coding	predicted gene 20696
chr6	99412306	99422519	-	99412306	99609218	A5SS	0.16	50	50	ENSMUST00000155466.2	ENSMUSG00000030068.5	Gm20696	chr6	protein_coding	predicted gene 20696
chr6	99609373	99613070	-	99609373	99628680	A5SS	0.5	50	50	ENSMUST00000155466.2	ENSMUSG00000030068.5	Gm20696	chr6	protein_coding	predicted gene 20696
chr6	99689418	99703189	-	99689418;99699595	99699470;99703189	ES	0.5	50	50	ENSMUST00000101120.11	ENSMUSG00000030069.16	Prok2	chr6	protein_coding	prokineticin 2
chr6	99689418;99691442	99691380;99699470	-	99689418	99699470	cassetteExon	0.5	100	100	ENSMUST00000101120.11	ENSMUSG00000030069.16	Prok2	chr6	protein_coding	prokineticin 2
chr6	99689418	99691380	-	99689418	99703189	A5SS	0.33	50	50	ENSMUST00000008273.8	ENSMUSG00000030069.16	Prok2	chr6	protein_coding	prokineticin 2
chr6	99689418	99703189	-	99699595	99703189	3pMXE	0.5	50	50	ENSMUST00000203738.2	ENSMUSG00000030069.16	Prok2	chr6	protein_coding	prokineticin 2
chr6	99905492	99908394	-	99905492	99927635	A5SS	0.5	50	50	ENSMUST00000204298.2	ENSMUSG00000107528.2	Gm44442	chr6	lncRNA	predicted gene, 44442
chr6	100588817	100625125	-	100614083	100625125	A3SS&ES	0.5	50	50	ENSMUST00000113312.9	ENSMUSG00000035378.18	Shq1	chr6	protein_coding	SHQ1 homolog (S. cerevisiae)
chr6	100639985	100641388	-	100632332	100641388	A3SS	0.5	50	50	ENSMUST00000113312.9	ENSMUSG00000035378.18	Shq1	chr6	protein_coding	SHQ1 homolog (S. cerevisiae)
chr6	100588817	100607844	-	100588817	100625125	A5SS	0.5	50	50	ENSMUST00000089245.7	ENSMUSG00000035378.18	Shq1	chr6	protein_coding	SHQ1 homolog (S. cerevisiae)
chr6	100682085	100683784	+	100682085	100710142	A3SS	0.5	50	50	ENSMUST00000032157.9	ENSMUSG00000030074.10	Gxylt2	chr6	protein_coding	glucoside xylosyltransferase 2
chr6	100840121	100842035	+	100840121;100841714	100841640;100842035	ES	0.5	50	50	ENSMUST00000063854.7	ENSMUSG00000052144.9	Ppp4r2	chr6	protein_coding	protein phosphatase 4, regulatory subunit 2
chr6	100841714	100842749	+	100841714;100842178	100842035;100842749	ES	0.5	50	50	ENSMUST00000063854.7	ENSMUSG00000052144.9	Ppp4r2	chr6	protein_coding	protein phosphatase 4, regulatory subunit 2
chr6	100841714	100842749	+	100842178	100842749	A5SS	0.5	50	50	ENSMUST00000204001.2	ENSMUSG00000052144.9	Ppp4r2	chr6	protein_coding	protein phosphatase 4, regulatory subunit 2
chr6	100840121;100841714	100841640;100842749	+	100840121;100842178	100842035;100842749	MXE	0.5	100	100	ENSMUST00000203940.3	ENSMUSG00000052144.9	Ppp4r2	chr6	protein_coding	protein phosphatase 4, regulatory subunit 2
chr6	101157087	101331355	-	101149408	101331355	A3SS	0.5	50	50	ENSMUST00000075994.11	ENSMUSG00000035357.18	Pdzrn3	chr6	protein_coding	PDZ domain containing RING finger 3
chr6	101149408	101175785	-	101149408	101331355	A5SS	0.5	50	50	ENSMUST00000075994.11	ENSMUSG00000035357.18	Pdzrn3	chr6	protein_coding	PDZ domain containing RING finger 3
chr6	101331462	101331790	-	101331462	101339100	A5SS	0.5	50	50	ENSMUST00000075994.11	ENSMUSG00000035357.18	Pdzrn3	chr6	protein_coding	PDZ domain containing RING finger 3
chr6	101175747	101196382	+	101175747	101185712	3pMXE	0.33	50	50	ENSMUST00000181770.2	ENSMUSG00000097834.3	Gm26911	chr6	lncRNA	predicted gene, 26911
chr6	101175747;101185398	101185294;101185712	+	101175747	101185712	cassetteExon	0.5	100	100	ENSMUST00000181770.2	ENSMUSG00000097834.3	Gm26911	chr6	lncRNA	predicted gene, 26911
chr6	101175747	101185294	+	101175747	101196382	A3SS	0.33	50	50	ENSMUST00000204244.2	ENSMUSG00000097834.3	Gm26911	chr6	lncRNA	predicted gene, 26911
chr6	101773777	101778662	+	101773777	101778529	A3SS	0.5	50	50	ENSMUST00000204837.3	ENSMUSG00000052236.8	Gm9871	chr6	lncRNA	predicted gene 9871
chr6	102246988	102247296	+	102246988	102283614	A3SS	0.5	50	50	ENSMUST00000203050.3	ENSMUSG00000107563.3	4930587E11Rik	chr6	lncRNA	RIKEN cDNA 4930587E11 gene
chr6	102243889	102246896	+	102243883	102246896	A5SS	0.5	50	50	ENSMUST00000203050.3	ENSMUSG00000107563.3	4930587E11Rik	chr6	lncRNA	RIKEN cDNA 4930587E11 gene
chr6	103642942	103645689	+	103642942;103643928	103643881;103645689	ES	0.5	50	50	ENSMUST00000203912.3	ENSMUSG00000030077.12	Chl1	chr6	protein_coding	cell adhesion molecule L1-like
chr6	103488110;103537076	103537007;103618855	+	103488110	103618855	cassetteExon	0.5	100	100	ENSMUST00000203912.3	ENSMUSG00000030077.12	Chl1	chr6	protein_coding	cell adhesion molecule L1-like
chr6	103688207;103691567	103691406;103692229	+	103688207	103692229	cassetteExon	0.5	100	100	ENSMUST00000203912.3	ENSMUSG00000030077.12	Chl1	chr6	protein_coding	cell adhesion molecule L1-like
chr6	103694592	103706080	+	103694592	103723230	A3SS	0.5	50	50	ENSMUST00000203912.3	ENSMUSG00000030077.12	Chl1	chr6	protein_coding	cell adhesion molecule L1-like
chr6	103488435	103618855	+	103488110	103618855	A5SS	0.33	50	50	ENSMUST00000203912.3	ENSMUSG00000030077.12	Chl1	chr6	protein_coding	cell adhesion molecule L1-like
chr6	103674918	103675066	+	103672463	103675066	A5SS	0.5	50	50	ENSMUST00000203912.3	ENSMUSG00000030077.12	Chl1	chr6	protein_coding	cell adhesion molecule L1-like
chr6	103488375	103537007	+	103488110	103537007	A5SS	0.5	50	50	ENSMUST00000203489.3	ENSMUSG00000030077.12	Chl1	chr6	protein_coding	cell adhesion molecule L1-like
chr6	103488435	103618855	+	103537076	103618855	A5SS&ES	0.33	50	50	ENSMUST00000203489.3	ENSMUSG00000030077.12	Chl1	chr6	protein_coding	cell adhesion molecule L1-like
chr6	104470233	104619858	+	104470233;104546054	104545918;104619858	ES	0.5	50	50	ENSMUST00000161446.2	ENSMUSG00000030092.15	Cntn6	chr6	protein_coding	contactin 6
chr6	104470233	104524589	+	104470233	104545918	A3SS	0.25	50	50	ENSMUST00000161446.2	ENSMUSG00000030092.15	Cntn6	chr6	protein_coding	contactin 6
chr6	104470233	104545915	+	104470233	104545918	A3SS	0.25	50	50	ENSMUST00000161446.2	ENSMUSG00000030092.15	Cntn6	chr6	protein_coding	contactin 6
chr6	104470233;104546054	104545915;104619858	+	104470233	104619858	cassetteExon	0.5	100	100	ENSMUST00000161070.8	ENSMUSG00000030092.15	Cntn6	chr6	protein_coding	contactin 6
chr6	104470233	104524589	+	104470233	104619858	A3SS	0.25	50	50	ENSMUST00000161070.8	ENSMUSG00000030092.15	Cntn6	chr6	protein_coding	contactin 6
chr6	104470233;104524684	104524589;104545915	+	104470233	104545915	cassetteExon	0.5	100	100	ENSMUST00000089215.12	ENSMUSG00000030092.15	Cntn6	chr6	protein_coding	contactin 6
chr6	104470233	104619858	+	104470233	104545915	3pMXE	0.25	50	50	ENSMUST00000161413.2	ENSMUSG00000030092.15	Cntn6	chr6	protein_coding	contactin 6
chr6	105654851	105817378	+	105654851;105718230	105718159;105817378	ES	0.5	50	50	ENSMUST00000132044.2	ENSMUSG00000064293.15	Cntn4	chr6	protein_coding	contactin 4
chr6	105901785	106158644	+	105901785;106101270	106101213;106158644	ES	0.33	50	50	ENSMUST00000113261.9	ENSMUSG00000064293.15	Cntn4	chr6	protein_coding	contactin 4
chr6	106649897	106651545	+	106649897	106650911	3pMXE	0.5	50	50	ENSMUST00000113261.9	ENSMUSG00000064293.15	Cntn4	chr6	protein_coding	contactin 4
chr6	106632639	106639537	+	106632639	106639534	A3SS	0.5	50	50	ENSMUST00000113261.9	ENSMUSG00000064293.15	Cntn4	chr6	protein_coding	contactin 4
chr6	106096074	106101213	+	105901785	106101213	A5SS	0.5	50	50	ENSMUST00000113261.9	ENSMUSG00000064293.15	Cntn4	chr6	protein_coding	contactin 4
chr6	106096074	106158644	+	106101270	106158644	A5SS&ES	0.33	50	50	ENSMUST00000113261.9	ENSMUSG00000064293.15	Cntn4	chr6	protein_coding	contactin 4
chr6	106490535	106500465	+	106486513	106500465	A5SS	0.5	50	50	ENSMUST00000113261.9	ENSMUSG00000064293.15	Cntn4	chr6	protein_coding	contactin 4
chr6	106649839	106656212	+	106655414	106656212	A5SS&ES	0.5	50	50	ENSMUST00000113264.9	ENSMUSG00000064293.15	Cntn4	chr6	protein_coding	contactin 4
chr6	106096074	106158644	+	105901785	106158644	A5SS	0.33	50	50	ENSMUST00000089208.9	ENSMUSG00000064293.15	Cntn4	chr6	protein_coding	contactin 4
chr6	106096074;106101270	106101213;106158644	+	106096074	106158644	cassetteExon	0.5	100	100	ENSMUST00000113258.8	ENSMUSG00000064293.15	Cntn4	chr6	protein_coding	contactin 4
chr6	106692664	106708754	-	106692664;106693751	106693658;106708754	ES	0.5	50	50	ENSMUST00000204659.3	ENSMUSG00000005364.12	Il5ra	chr6	protein_coding	interleukin 5 receptor, alpha
chr6	106719758	106721225	-	106708892	106721225	A3SS	0.5	50	50	ENSMUST00000205004.2	ENSMUSG00000005364.12	Il5ra	chr6	protein_coding	interleukin 5 receptor, alpha
chr6	106722541	106725808	-	106721309	106725808	A3SS	0.5	50	50	ENSMUST00000205004.2	ENSMUSG00000005364.12	Il5ra	chr6	protein_coding	interleukin 5 receptor, alpha
chr6	106708892	106712666	-	106708892	106721225	A5SS	0.5	50	50	ENSMUST00000205004.2	ENSMUSG00000005364.12	Il5ra	chr6	protein_coding	interleukin 5 receptor, alpha
chr6	106721309	106722034	-	106721309	106725808	A5SS	0.5	50	50	ENSMUST00000205004.2	ENSMUSG00000005364.12	Il5ra	chr6	protein_coding	interleukin 5 receptor, alpha
chr6	106753206	106754879	+	106753206	106753415	3pMXE	0.5	50	50	ENSMUST00000113247.8	ENSMUSG00000013736.17	Trnt1	chr6	protein_coding	tRNA nucleotidyl transferase, CCA-adding, 1
chr6	106746152	106746817	+	106746152	106746791	A3SS	0.5	50	50	ENSMUST00000113247.8	ENSMUSG00000013736.17	Trnt1	chr6	protein_coding	tRNA nucleotidyl transferase, CCA-adding, 1
chr6	106746964	106747763	+	106746964	106750246	A3SS	0.5	50	50	ENSMUST00000113247.8	ENSMUSG00000013736.17	Trnt1	chr6	protein_coding	tRNA nucleotidyl transferase, CCA-adding, 1
chr6	106746217	106746791	+	106746152	106746791	A5SS	0.33	50	50	ENSMUST00000113247.8	ENSMUSG00000013736.17	Trnt1	chr6	protein_coding	tRNA nucleotidyl transferase, CCA-adding, 1
chr6	106746515	106746791	+	106746152	106746791	A5SS	0.33	50	50	ENSMUST00000113247.8	ENSMUSG00000013736.17	Trnt1	chr6	protein_coding	tRNA nucleotidyl transferase, CCA-adding, 1
chr6	106746515	106746791	+	106746217	106746791	A5SS	0.33	50	50	ENSMUST00000057578.16	ENSMUSG00000013736.17	Trnt1	chr6	protein_coding	tRNA nucleotidyl transferase, CCA-adding, 1
chr6	106772958	106776952	-	106772955	106776952	A3SS	0.5	50	50	ENSMUST00000013882.10	ENSMUSG00000005362.15	Crbn	chr6	protein_coding	cereblon
chr6	106772955	106775908	-	106772955	106776952	A5SS	0.5	50	50	ENSMUST00000013882.10	ENSMUSG00000005362.15	Crbn	chr6	protein_coding	cereblon
chr6	108042200;108050080	108049928;108052667	+	108042200	108052667	cassetteExon	0.5	100	100	ENSMUST00000049246.7	ENSMUSG00000034639.8	Setmar	chr6	protein_coding	SET domain without mariner transposase fusion
chr6	108132002	108152949	-	108132002;108150391	108150317;108152949	ES	0.33	50	50	ENSMUST00000032191.16	ENSMUSG00000030101.16	Sumf1	chr6	protein_coding	sulfatase modifying factor 1
chr6	108095640	108103908	-	108095640	108121552	A5SS	0.5	50	50	ENSMUST00000032191.16	ENSMUSG00000030101.16	Sumf1	chr6	protein_coding	sulfatase modifying factor 1
chr6	108132002	108152949	-	108121665	108152949	A3SS	0.33	50	50	ENSMUST00000172188.2	ENSMUSG00000030101.16	Sumf1	chr6	protein_coding	sulfatase modifying factor 1
chr6	108150391	108152949	-	108121665	108152949	A3SS	0.33	50	50	ENSMUST00000172188.2	ENSMUSG00000030101.16	Sumf1	chr6	protein_coding	sulfatase modifying factor 1
chr6	108121665	108129188	-	108121665	108152949	A5SS	0.5	50	50	ENSMUST00000172188.2	ENSMUSG00000030101.16	Sumf1	chr6	protein_coding	sulfatase modifying factor 1
chr6	108340666	108345972	+	108340666;108342304	108342260;108345972	ES	0.5	50	50	ENSMUST00000032192.9	ENSMUSG00000030102.12	Itpr1	chr6	protein_coding	inositol 1,4,5-trisphosphate receptor 1
chr6	108394961	108408422	+	108394961;108400326	108400294;108408422	ES	0.5	50	50	ENSMUST00000032192.9	ENSMUSG00000030102.12	Itpr1	chr6	protein_coding	inositol 1,4,5-trisphosphate receptor 1
chr6	108408457	108409610	+	108408457	108409607	A3SS	0.5	50	50	ENSMUST00000032192.9	ENSMUSG00000030102.12	Itpr1	chr6	protein_coding	inositol 1,4,5-trisphosphate receptor 1
chr6	108230044	108316468	+	108218295	108316468	A5SS	0.5	50	50	ENSMUST00000032192.9	ENSMUSG00000030102.12	Itpr1	chr6	protein_coding	inositol 1,4,5-trisphosphate receptor 1
chr6	108365326	108366328	+	108365299	108366328	A5SS	0.5	50	50	ENSMUST00000032192.9	ENSMUSG00000030102.12	Itpr1	chr6	protein_coding	inositol 1,4,5-trisphosphate receptor 1
chr6	108369550	108370866	+	108369546	108370866	A5SS	0.5	50	50	ENSMUST00000032192.9	ENSMUSG00000030102.12	Itpr1	chr6	protein_coding	inositol 1,4,5-trisphosphate receptor 1
chr6	108435912	108447984	+	108417648	108447984	A5SS	0.5	50	50	ENSMUST00000032192.9	ENSMUSG00000030102.12	Itpr1	chr6	protein_coding	inositol 1,4,5-trisphosphate receptor 1
chr6	108394961	108409607	+	108394961	108400294	A3SS&ES	0.25	50	50	ENSMUST00000203615.3	ENSMUSG00000030102.12	Itpr1	chr6	protein_coding	inositol 1,4,5-trisphosphate receptor 1
chr6	108394961	108409607	+	108394961	108408422	A3SS&ES	0.25	50	50	ENSMUST00000203262.3	ENSMUSG00000030102.12	Itpr1	chr6	protein_coding	inositol 1,4,5-trisphosphate receptor 1
chr6	108394961;108409657	108409607;108415261	+	108394961	108415261	cassetteExon	0.5	100	100	ENSMUST00000203638.3	ENSMUSG00000030102.12	Itpr1	chr6	protein_coding	inositol 1,4,5-trisphosphate receptor 1
chr6	108394961	108400294	+	108394961	108415261	A3SS	0.25	50	50	ENSMUST00000203638.3	ENSMUSG00000030102.12	Itpr1	chr6	protein_coding	inositol 1,4,5-trisphosphate receptor 1
chr6	108394961	108408422	+	108394961	108415261	A3SS	0.25	50	50	ENSMUST00000203638.3	ENSMUSG00000030102.12	Itpr1	chr6	protein_coding	inositol 1,4,5-trisphosphate receptor 1
chr6	108394961;108408457	108408422;108409607	+	108394961	108409607	cassetteExon	0.5	100	100	ENSMUST00000203687.2	ENSMUSG00000030102.12	Itpr1	chr6	protein_coding	inositol 1,4,5-trisphosphate receptor 1
chr6	108589393	108590093	-	108559715	108590093	A3SS	0.5	50	50	ENSMUST00000137478.4	ENSMUSG00000087341.5	0610040F04Rik	chr6	lncRNA	RIKEN cDNA 0610040F04 gene
chr6	108771893	108790588	+	108760338	108790588	A5SS	0.5	50	50	ENSMUST00000032196.9	ENSMUSG00000030105.9	Arl8b	chr6	protein_coding	ADP-ribosylation factor-like 8B
chr6	108813429	108813701	+	108806194	108813701	A5SS	0.5	50	50	ENSMUST00000204804.3	ENSMUSG00000030104.10	Edem1	chr6	protein_coding	ER degradation enhancer, mannosidase alpha-like 1
chr6	108828244	108829451	+	108828463	108829451	A5SS	0.5	50	50	ENSMUST00000204804.3	ENSMUSG00000030104.10	Edem1	chr6	protein_coding	ER degradation enhancer, mannosidase alpha-like 1
chr6	110623347	110891288	+	110623347;110680436	110680403;110891288	ES	0.5	50	50	ENSMUST00000174018.8	ENSMUSG00000056755.14	Grm7	chr6	protein_coding	glutamate receptor, metabotropic 7
chr6	111472860	111542979	+	111472860;111478562	111478471;111542979	ES	0.5	50	50	ENSMUST00000071076.13	ENSMUSG00000056755.14	Grm7	chr6	protein_coding	glutamate receptor, metabotropic 7
chr6	111472860	111476662	+	111472860	111478471	A3SS	0.33	50	50	ENSMUST00000071076.13	ENSMUSG00000056755.14	Grm7	chr6	protein_coding	glutamate receptor, metabotropic 7
chr6	111478562	111479108	+	111478562	111542979	A3SS	0.5	50	50	ENSMUST00000071076.13	ENSMUSG00000056755.14	Grm7	chr6	protein_coding	glutamate receptor, metabotropic 7
chr6	111472860	111476662	+	111472860	111542979	A3SS	0.33	50	50	ENSMUST00000172951.2	ENSMUSG00000056755.14	Grm7	chr6	protein_coding	glutamate receptor, metabotropic 7
chr6	112346803	112351740	-	112336597	112351740	A3SS	0.5	50	50	ENSMUST00000060847.6	ENSMUSG00000034387.14	Ssu2	chr6	protein_coding	ssu-2 homolog (C. elegans)
chr6	112359406	112360847	-	112359409	112360847	A3SS	0.5	50	50	ENSMUST00000060847.6	ENSMUSG00000034387.14	Ssu2	chr6	protein_coding	ssu-2 homolog (C. elegans)
chr6	112454282	112465270	-	112454282	112465840	A5SS	0.5	50	50	ENSMUST00000053306.8	ENSMUSG00000049112.10	Oxtr	chr6	protein_coding	oxytocin receptor
chr6	112621708	112642239	-	112621708;112626798	112626556;112642239	ES	0.33	50	50	ENSMUST00000077088.11	ENSMUSG00000030254.17	Rad18	chr6	protein_coding	RAD18 E3 ubiquitin protein ligase
chr6	112642299	112652707	-	112642299;112649161	112649085;112652707	ES	0.5	50	50	ENSMUST00000077088.11	ENSMUSG00000030254.17	Rad18	chr6	protein_coding	RAD18 E3 ubiquitin protein ligase
chr6	112597865;112605485	112605423;112621549	-	112597865	112621549	cassetteExon	0.5	100	100	ENSMUST00000077088.11	ENSMUSG00000030254.17	Rad18	chr6	protein_coding	RAD18 E3 ubiquitin protein ligase
chr6	112626798;112641134	112641057;112642239	-	112626798	112642239	cassetteExon	0.5	100	100	ENSMUST00000077088.11	ENSMUSG00000030254.17	Rad18	chr6	protein_coding	RAD18 E3 ubiquitin protein ligase
chr6	112670511	112673564	-	112670511	112673505	A5SS	0.5	50	50	ENSMUST00000077088.11	ENSMUSG00000030254.17	Rad18	chr6	protein_coding	RAD18 E3 ubiquitin protein ligase
chr6	112641134	112642239	-	112621708	112642239	A3SS	0.33	50	50	ENSMUST00000113182.8	ENSMUSG00000030254.17	Rad18	chr6	protein_coding	RAD18 E3 ubiquitin protein ligase
chr6	112597865	112621549	-	112605485	112621549	3pMXE	0.5	50	50	ENSMUST00000132590.8	ENSMUSG00000030254.17	Rad18	chr6	protein_coding	RAD18 E3 ubiquitin protein ligase
chr6	112726383;112727372	112727342;112736710	-	112726383;112731634	112731532;112736710	MXE	0.5	100	100	ENSMUST00000088373.11	ENSMUSG00000030257.17	Srgap3	chr6	protein_coding	SLIT-ROBO Rho GTPase activating protein 3
chr6	112726383;112734391	112734115;112736710	-	112726383;112731634	112731532;112736710	MXE	0.5	100	100	ENSMUST00000088373.11	ENSMUSG00000030257.17	Srgap3	chr6	protein_coding	SLIT-ROBO Rho GTPase activating protein 3
chr6	112726383;112734391	112734115;112736710	-	112726383;112727372	112727342;112736710	MXE	0.5	100	100	ENSMUST00000113169.9	ENSMUSG00000030257.17	Srgap3	chr6	protein_coding	SLIT-ROBO Rho GTPase activating protein 3
chr6	113026377	113027718	+	113026377	113032600	A3SS	0.5	50	50	ENSMUST00000032398.15	ENSMUSG00000030264.15	Thumpd3	chr6	protein_coding	THUMP domain containing 3
chr6	113023420	113024376	+	113023351	113024376	A5SS	0.25	50	50	ENSMUST00000032398.15	ENSMUSG00000030264.15	Thumpd3	chr6	protein_coding	THUMP domain containing 3
chr6	113023525	113024376	+	113023351	113024376	A5SS	0.25	50	50	ENSMUST00000032398.15	ENSMUSG00000030264.15	Thumpd3	chr6	protein_coding	THUMP domain containing 3
chr6	113024152	113024376	+	113023351	113024376	A5SS	0.25	50	50	ENSMUST00000032398.15	ENSMUSG00000030264.15	Thumpd3	chr6	protein_coding	THUMP domain containing 3
chr6	113023525	113024376	+	113023420	113024376	A5SS	0.25	50	50	ENSMUST00000155378.2	ENSMUSG00000030264.15	Thumpd3	chr6	protein_coding	THUMP domain containing 3
chr6	113024152	113024376	+	113023420	113024376	A5SS	0.25	50	50	ENSMUST00000155378.2	ENSMUSG00000030264.15	Thumpd3	chr6	protein_coding	THUMP domain containing 3
chr6	113024152	113024376	+	113023525	113024376	A5SS	0.25	50	50	ENSMUST00000138278.2	ENSMUSG00000030264.15	Thumpd3	chr6	protein_coding	THUMP domain containing 3
chr6	113048396	113054029	-	113048396	113054135	A5SS	0.5	50	50	ENSMUST00000167415.8	ENSMUSG00000086429.10	lncRNA	chr6	lncRNA	--
chr6	113082082	113086385	+	113082082	113082878	3pMXE	0.25	50	50	ENSMUST00000143998.8	ENSMUSG00000034269.13	Setd5	chr6	protein_coding	SET domain containing 5
chr6	113082082	113086846	+	113082082	113082878	3pMXE	0.25	50	50	ENSMUST00000143998.8	ENSMUSG00000034269.13	Setd5	chr6	protein_coding	SET domain containing 5
chr6	113082082;113082722	113082626;113082878	+	113082082	113082878	cassetteExon	0.5	100	100	ENSMUST00000143998.8	ENSMUSG00000034269.13	Setd5	chr6	protein_coding	SET domain containing 5
chr6	113082082;113083102	113082626;113086846	+	113082082	113086846	cassetteExon	0.5	100	100	ENSMUST00000042889.12	ENSMUSG00000034269.13	Setd5	chr6	protein_coding	SET domain containing 5
chr6	113082082;113083102	113082878;113086846	+	113082082	113086846	cassetteExon	0.5	100	100	ENSMUST00000042889.12	ENSMUSG00000034269.13	Setd5	chr6	protein_coding	SET domain containing 5
chr6	113082082;113086577	113086385;113086846	+	113082082	113086846	cassetteExon	0.5	100	100	ENSMUST00000042889.12	ENSMUSG00000034269.13	Setd5	chr6	protein_coding	SET domain containing 5
chr6	113086951	113087046	+	113086951	113087335	A3SS	0.33	50	50	ENSMUST00000042889.12	ENSMUSG00000034269.13	Setd5	chr6	protein_coding	SET domain containing 5
chr6	113086951	113087278	+	113086951	113087335	A3SS	0.33	50	50	ENSMUST00000042889.12	ENSMUSG00000034269.13	Setd5	chr6	protein_coding	SET domain containing 5
chr6	113086915	113094329	+	113093850	113094329	A5SS&ES	0.5	50	50	ENSMUST00000042889.12	ENSMUSG00000034269.13	Setd5	chr6	protein_coding	SET domain containing 5
chr6	113105738	113114914	+	113105502	113114914	A5SS	0.5	50	50	ENSMUST00000042889.12	ENSMUSG00000034269.13	Setd5	chr6	protein_coding	SET domain containing 5
chr6	113082082;113083102	113082626;113086846	+	113082082;113086577	113086385;113086846	MXE	0.5	100	100	ENSMUST00000125003.8	ENSMUSG00000034269.13	Setd5	chr6	protein_coding	SET domain containing 5
chr6	113082082;113083102	113082878;113086846	+	113082082;113086577	113086385;113086846	MXE	0.5	100	100	ENSMUST00000125003.8	ENSMUSG00000034269.13	Setd5	chr6	protein_coding	SET domain containing 5
chr6	113086951;113087182	113087046;113087278	+	113086951	113087278	cassetteExon	0.5	100	100	ENSMUST00000113157.8	ENSMUSG00000034269.13	Setd5	chr6	protein_coding	SET domain containing 5
chr6	113237619	113242405	+	113237619;113238241	113238167;113242405	ES	0.5	50	50	ENSMUST00000113146.9	ENSMUSG00000030269.15	Mtmr14	chr6	protein_coding	myotubularin related protein 14
chr6	113242471	113243221	+	113242471;113243016	113242931;113243221	ES	0.5	50	50	ENSMUST00000113146.9	ENSMUSG00000030269.15	Mtmr14	chr6	protein_coding	myotubularin related protein 14
chr6	113245656	113246693	+	113245656;113246520	113246462;113246693	ES	0.5	50	50	ENSMUST00000113146.9	ENSMUSG00000030269.15	Mtmr14	chr6	protein_coding	myotubularin related protein 14
chr6	113246831	113254751	+	113246831;113247662	113247483;113254751	ES	0.5	50	50	ENSMUST00000113146.9	ENSMUSG00000030269.15	Mtmr14	chr6	protein_coding	myotubularin related protein 14
chr6	113247662	113257564	+	113247662;113254906	113254751;113257564	ES	0.5	50	50	ENSMUST00000113146.9	ENSMUSG00000030269.15	Mtmr14	chr6	protein_coding	myotubularin related protein 14
chr6	113247662	113254792	+	113247662	113254751	A3SS	0.33	50	50	ENSMUST00000113146.9	ENSMUSG00000030269.15	Mtmr14	chr6	protein_coding	myotubularin related protein 14
chr6	113216541	113217246	+	113215082	113217246	A5SS	0.5	50	50	ENSMUST00000113146.9	ENSMUSG00000030269.15	Mtmr14	chr6	protein_coding	myotubularin related protein 14
chr6	113232804	113237549	+	113234057	113237549	A5SS&ES	0.5	50	50	ENSMUST00000113146.9	ENSMUSG00000030269.15	Mtmr14	chr6	protein_coding	myotubularin related protein 14
chr6	113232882	113233984	+	113232899	113233984	A5SS	0.33	50	50	ENSMUST00000113146.9	ENSMUSG00000030269.15	Mtmr14	chr6	protein_coding	myotubularin related protein 14
chr6	113233749	113233984	+	113232899	113233984	A5SS	0.33	50	50	ENSMUST00000113146.9	ENSMUSG00000030269.15	Mtmr14	chr6	protein_coding	myotubularin related protein 14
chr6	113246831	113254751	+	113246831	113247483	3pMXE	0.5	50	50	ENSMUST00000142938.8	ENSMUSG00000030269.15	Mtmr14	chr6	protein_coding	myotubularin related protein 14
chr6	113226940;113231111	113230692;113232777	+	113226940	113232777	cassetteExon	0.5	100	100	ENSMUST00000142938.8	ENSMUSG00000030269.15	Mtmr14	chr6	protein_coding	myotubularin related protein 14
chr6	113232882;113233749	113233623;113233984	+	113232882	113233984	cassetteExon	0.5	100	100	ENSMUST00000142938.8	ENSMUSG00000030269.15	Mtmr14	chr6	protein_coding	myotubularin related protein 14
chr6	113226940	113232777	+	113231111	113232777	5pMXE	0.5	50	50	ENSMUST00000144976.4	ENSMUSG00000030269.15	Mtmr14	chr6	protein_coding	myotubularin related protein 14
chr6	113245656	113246693	+	113245656	113246462	3pMXE	0.5	50	50	ENSMUST00000144976.4	ENSMUSG00000030269.15	Mtmr14	chr6	protein_coding	myotubularin related protein 14
chr6	113242471	113243221	+	113242471	113242931	3pMXE	0.5	50	50	ENSMUST00000203385.2	ENSMUSG00000030269.15	Mtmr14	chr6	protein_coding	myotubularin related protein 14
chr6	113247662	113257564	+	113247662	113254751	3pMXE	0.33	50	50	ENSMUST00000137772.8	ENSMUSG00000030269.15	Mtmr14	chr6	protein_coding	myotubularin related protein 14
chr6	113242471	113243221	+	113243016	113243221	5pMXE	0.5	50	50	ENSMUST00000148523.8	ENSMUSG00000030269.15	Mtmr14	chr6	protein_coding	myotubularin related protein 14
chr6	113246831;113247662	113247483;113257564	+	113246831;113254906	113254751;113257564	MXE	0.5	100	100	ENSMUST00000148523.8	ENSMUSG00000030269.15	Mtmr14	chr6	protein_coding	myotubularin related protein 14
chr6	113247662;113254906	113254792;113257564	+	113247662	113257564	cassetteExon	0.5	100	100	ENSMUST00000134945.8	ENSMUSG00000030269.15	Mtmr14	chr6	protein_coding	myotubularin related protein 14
chr6	113245656	113246693	+	113246520	113246693	5pMXE	0.5	50	50	ENSMUST00000151149.2	ENSMUSG00000030269.15	Mtmr14	chr6	protein_coding	myotubularin related protein 14
chr6	113260048	113260311	+	113260048;113260203	113260157;113260311	ES	0.5	50	50	ENSMUST00000041203.6	ENSMUSG00000030270.12	Cpne9	chr6	protein_coding	copine family member IX
chr6	113260414	113261166	+	113260414;113260943	113260907;113261166	ES	0.5	50	50	ENSMUST00000041203.6	ENSMUSG00000030270.12	Cpne9	chr6	protein_coding	copine family member IX
chr6	113259502	113259922	+	113259502	113260008	A3SS	0.5	50	50	ENSMUST00000041203.6	ENSMUSG00000030270.12	Cpne9	chr6	protein_coding	copine family member IX
chr6	113271354	113271573	+	113270716	113271573	A5SS	0.5	50	50	ENSMUST00000041203.6	ENSMUSG00000030270.12	Cpne9	chr6	protein_coding	copine family member IX
chr6	113260048	113260311	+	113260048	113260157	A3SS	0.5	50	50	ENSMUST00000124574.8	ENSMUSG00000030270.12	Cpne9	chr6	protein_coding	copine family member IX
chr6	113260414	113261166	+	113260414	113260907	3pMXE	0.5	50	50	ENSMUST00000155779.8	ENSMUSG00000030270.12	Cpne9	chr6	protein_coding	copine family member IX
chr6	113296322	113297395	+	113296322;113296913	113296629;113297395	ES	0.5	50	50	ENSMUST00000113122.8	ENSMUSG00000001632.17	Brpf1	chr6	protein_coding	bromodomain and PHD finger containing, 1
chr6	113295682	113295999	+	113295682	113296002	A3SS	0.5	50	50	ENSMUST00000113122.8	ENSMUSG00000001632.17	Brpf1	chr6	protein_coding	bromodomain and PHD finger containing, 1
chr6	113284298	113286764	+	113284530	113286764	A5SS	0.5	50	50	ENSMUST00000113122.8	ENSMUSG00000001632.17	Brpf1	chr6	protein_coding	bromodomain and PHD finger containing, 1
chr6	113294655	113295373	+	113294637	113295373	A5SS	0.5	50	50	ENSMUST00000113122.8	ENSMUSG00000001632.17	Brpf1	chr6	protein_coding	bromodomain and PHD finger containing, 1
chr6	113304323	113305304	+	113304323	113305326	A3SS	0.5	50	50	ENSMUST00000032406.15	ENSMUSG00000030271.15	Ogg1	chr6	protein_coding	8-oxoguanine DNA-glycosylase 1
chr6	113305573	113306107	+	113305573	113306190	A3SS	0.33	50	50	ENSMUST00000032406.15	ENSMUSG00000030271.15	Ogg1	chr6	protein_coding	8-oxoguanine DNA-glycosylase 1
chr6	113305573	113306297	+	113305573	113306190	A3SS	0.33	50	50	ENSMUST00000032406.15	ENSMUSG00000030271.15	Ogg1	chr6	protein_coding	8-oxoguanine DNA-glycosylase 1
chr6	113305573	113306297	+	113305573	113306107	A3SS	0.33	50	50	ENSMUST00000136263.4	ENSMUSG00000030271.15	Ogg1	chr6	protein_coding	8-oxoguanine DNA-glycosylase 1
chr6	113305440	113306107	+	113305573	113306107	A5SS	0.5	50	50	ENSMUST00000136263.4	ENSMUSG00000030271.15	Ogg1	chr6	protein_coding	8-oxoguanine DNA-glycosylase 1
chr6	113316542	113318829	-	113316542;113317384	113317253;113318829	ES	0.5	50	50	ENSMUST00000032409.15	ENSMUSG00000030272.16	Camk1	chr6	protein_coding	calcium/calmodulin-dependent protein kinase I
chr6	113316542	113318829	-	113316542	113317253	5pMXE	0.5	50	50	ENSMUST00000156512.7	ENSMUSG00000030272.16	Camk1	chr6	protein_coding	calcium/calmodulin-dependent protein kinase I
chr6	113353025;113353906	113353853;113354277	-	113353025	113354277	cassetteExon	0.5	100	100	ENSMUST00000032410.14	ENSMUSG00000048930.13	Tada3	chr6	protein_coding	transcriptional adaptor 3
chr6	113349567	113351797	-	113349567	113351740	A5SS	0.5	50	50	ENSMUST00000032410.14	ENSMUSG00000048930.13	Tada3	chr6	protein_coding	transcriptional adaptor 3
chr6	113349525	113353853	-	113353025	113353853	A3SS&ES	0.5	50	50	ENSMUST00000043333.9	ENSMUSG00000048930.13	Tada3	chr6	protein_coding	transcriptional adaptor 3
chr6	113353025	113354277	-	113353906	113354277	A3SS&ES	0.5	50	50	ENSMUST00000099118.8	ENSMUSG00000048930.13	Tada3	chr6	protein_coding	transcriptional adaptor 3
chr6	113353025	113354277	-	113353025	113353853	A5SS	0.5	50	50	ENSMUST00000113106.3	ENSMUSG00000048930.13	Tada3	chr6	protein_coding	transcriptional adaptor 3
chr6	113355169	113358924	+	113355169;113357805	113357687;113358924	ES	0.5	50	50	ENSMUST00000156898.5	ENSMUSG00000079426.14	Arpc4	chr6	protein_coding	actin related protein 2/3 complex, subunit 4
chr6	113355581	113357687	+	113355169	113357687	A5SS	0.5	50	50	ENSMUST00000156898.5	ENSMUSG00000079426.14	Arpc4	chr6	protein_coding	actin related protein 2/3 complex, subunit 4
chr6	113355169	113361043	+	113355169;113359035	113358924;113361043	ES	0.5	50	50	ENSMUST00000203578.3	ENSMUSG00000079426.14	Arpc4	chr6	protein_coding	actin related protein 2/3 complex, subunit 4
chr6	113355169	113357687	+	113355169	113361043	A3SS	0.33	50	50	ENSMUST00000171058.8	ENSMUSG00000079426.14	Arpc4	chr6	protein_coding	actin related protein 2/3 complex, subunit 4
chr6	113371821	113374891	+	113371821;113372056	113371959;113374891	ES	0.5	50	50	ENSMUST00000204026.3	ENSMUSG00000030276.20	Ttll3	chr6	protein_coding	tubulin tyrosine ligase-like family, member 3
chr6	113370155	113371542	+	113370155	113371653	A3SS	0.5	50	50	ENSMUST00000204026.3	ENSMUSG00000030276.20	Ttll3	chr6	protein_coding	tubulin tyrosine ligase-like family, member 3
chr6	113367779	113370064	+	113366503	113370064	A5SS	0.33	50	50	ENSMUST00000204026.3	ENSMUSG00000030276.20	Ttll3	chr6	protein_coding	tubulin tyrosine ligase-like family, member 3
chr6	113369857	113370064	+	113366503	113370064	A5SS	0.33	50	50	ENSMUST00000204026.3	ENSMUSG00000030276.20	Ttll3	chr6	protein_coding	tubulin tyrosine ligase-like family, member 3
chr6	113369857	113370064	+	113367779	113370064	A5SS	0.33	50	50	ENSMUST00000204683.2	ENSMUSG00000030276.20	Ttll3	chr6	protein_coding	tubulin tyrosine ligase-like family, member 3
chr6	113376732	113382260	+	113376732;113378458	113378263;113382260	ES	0.5	50	50	ENSMUST00000032414.11	ENSMUSG00000030276.20	Ttll3	chr6	protein_coding	tubulin tyrosine ligase-like family, member 3
chr6	113390020;113390659	113390583;113390824	+	113390020	113390824	cassetteExon	0.5	100	100	ENSMUST00000032414.11	ENSMUSG00000030276.20	Ttll3	chr6	protein_coding	tubulin tyrosine ligase-like family, member 3
chr6	113375845	113376625	+	113375845	113376628	A3SS	0.33	50	50	ENSMUST00000032414.11	ENSMUSG00000030276.20	Ttll3	chr6	protein_coding	tubulin tyrosine ligase-like family, member 3
chr6	113375845	113376666	+	113375845	113376628	A3SS	0.33	50	50	ENSMUST00000032414.11	ENSMUSG00000030276.20	Ttll3	chr6	protein_coding	tubulin tyrosine ligase-like family, member 3
chr6	113386301	113386600	+	113386301	113389750	A3SS	0.5	50	50	ENSMUST00000032414.11	ENSMUSG00000030276.20	Ttll3	chr6	protein_coding	tubulin tyrosine ligase-like family, member 3
chr6	113375845	113376666	+	113375845	113376625	A3SS	0.33	50	50	ENSMUST00000038889.12	ENSMUSG00000030276.20	Ttll3	chr6	protein_coding	tubulin tyrosine ligase-like family, member 3
chr6	113394907	113395771	-	113394907;113395036	113394992;113395771	ES	0.33	50	50	ENSMUST00000113092.9	ENSMUSG00000051169.15	Rpusd3	chr6	protein_coding	RNA pseudouridylate synthase domain containing 3
chr6	113393393	113393750	-	113393407	113393750	A3SS	0.5	50	50	ENSMUST00000113092.9	ENSMUSG00000051169.15	Rpusd3	chr6	protein_coding	RNA pseudouridylate synthase domain containing 3
chr6	113395883	113396179	-	113395910	113396179	A3SS	0.5	50	50	ENSMUST00000113092.9	ENSMUSG00000051169.15	Rpusd3	chr6	protein_coding	RNA pseudouridylate synthase domain containing 3
chr6	113394372	113395771	-	113394372;113394907	113394808;113395771	ES	0.33	50	50	ENSMUST00000151618.8	ENSMUSG00000051169.15	Rpusd3	chr6	protein_coding	RNA pseudouridylate synthase domain containing 3
chr6	113394372;113395036	113394808;113395771	-	113394372	113395771	cassetteExon	0.5	100	100	ENSMUST00000129560.2	ENSMUSG00000051169.15	Rpusd3	chr6	protein_coding	RNA pseudouridylate synthase domain containing 3
chr6	113411473	113411691	-	113411473	113412675	A5SS	0.33	50	50	ENSMUST00000113089.8	ENSMUSG00000030278.12	Cidec	chr6	protein_coding	cell death-inducing DFFA-like effector c
chr6	113411473	113412686	-	113411473	113412675	A5SS	0.33	50	50	ENSMUST00000113089.8	ENSMUSG00000030278.12	Cidec	chr6	protein_coding	cell death-inducing DFFA-like effector c
chr6	113411473	113411691	-	113411473	113412686	A5SS	0.33	50	50	ENSMUST00000032416.11	ENSMUSG00000030278.12	Cidec	chr6	protein_coding	cell death-inducing DFFA-like effector c
chr6	113419765	113424219	+	113419758	113424219	A5SS	0.5	50	50	ENSMUST00000101070.5	ENSMUSG00000051256.11	Jagn1	chr6	protein_coding	jagunal homolog 1
chr6	113435987	113439240	+	113435987;113436336	113436321;113439240	ES	0.33	50	50	ENSMUST00000058548.14	ENSMUSG00000043088.17	Il17re	chr6	protein_coding	interleukin 17 receptor E
chr6	113436336;113437185	113437127;113439240	+	113436336	113439240	cassetteExon	0.5	100	100	ENSMUST00000058548.14	ENSMUSG00000043088.17	Il17re	chr6	protein_coding	interleukin 17 receptor E
chr6	113445918	113446479	+	113445918	113445991	A3SS&ES	0.33	50	50	ENSMUST00000058548.14	ENSMUSG00000043088.17	Il17re	chr6	protein_coding	interleukin 17 receptor E
chr6	113445918	113446557	+	113445918	113445991	A3SS&ES	0.33	50	50	ENSMUST00000058548.14	ENSMUSG00000043088.17	Il17re	chr6	protein_coding	interleukin 17 receptor E
chr6	113445918	113446479	+	113445918	113446557	A3SS	0.33	50	50	ENSMUST00000203661.3	ENSMUSG00000043088.17	Il17re	chr6	protein_coding	interleukin 17 receptor E
chr6	113437185	113439240	+	113435987	113439240	A5SS	0.33	50	50	ENSMUST00000053569.7	ENSMUSG00000043088.17	Il17re	chr6	protein_coding	interleukin 17 receptor E
chr6	113451233;113451558	113451514;113453387	+	113451233	113453387	cassetteExon	0.5	100	100	ENSMUST00000058300.14	ENSMUSG00000030281.17	Il17rc	chr6	protein_coding	interleukin 17 receptor C
chr6	113451233	113453360	+	113451233	113453387	A3SS	0.33	50	50	ENSMUST00000058300.14	ENSMUSG00000030281.17	Il17rc	chr6	protein_coding	interleukin 17 receptor C
chr6	113451233;113451558	113451514;113453360	+	113451233	113453360	cassetteExon	0.5	100	100	ENSMUST00000204447.3	ENSMUSG00000030281.17	Il17rc	chr6	protein_coding	interleukin 17 receptor C
chr6	113451233	113453387	+	113451233	113451514	A3SS&ES	0.33	50	50	ENSMUST00000205208.3	ENSMUSG00000030281.17	Il17rc	chr6	protein_coding	interleukin 17 receptor C
chr6	113451558	113453387	+	113451558	113453360	A3SS	0.5	50	50	ENSMUST00000205208.3	ENSMUSG00000030281.17	Il17rc	chr6	protein_coding	interleukin 17 receptor C
chr6	113451233	113453360	+	113451233	113451514	A3SS&ES	0.33	50	50	ENSMUST00000204632.2	ENSMUSG00000030281.17	Il17rc	chr6	protein_coding	interleukin 17 receptor C
chr6	113464879	113465032	+	113461538	113465032	A5SS	0.5	50	50	ENSMUST00000032422.6	ENSMUSG00000030284.12	Creld1	chr6	protein_coding	cysteine-rich with EGF-like domains 1
chr6	113474045	113474233	-	113474048	113474233	A3SS	0.5	50	50	ENSMUST00000204268.3	ENSMUSG00000045009.10	Prrt3	chr6	protein_coding	proline-rich transmembrane protein 3
chr6	113475277	113478811	-	113475356	113478811	A3SS	0.5	50	50	ENSMUST00000204268.3	ENSMUSG00000045009.10	Prrt3	chr6	protein_coding	proline-rich transmembrane protein 3
chr6	113475277	113478645	-	113475277	113478811	A5SS	0.5	50	50	ENSMUST00000204134.3	ENSMUSG00000045009.10	Prrt3	chr6	protein_coding	proline-rich transmembrane protein 3
chr6	113562504	113564343	+	113562504;113563209	113563171;113564343	ES	0.5	50	50	ENSMUST00000036340.12	ENSMUSG00000034023.17	Fancd2	chr6	protein_coding	Fanconi anemia, complementation group D2
chr6	113533334	113537014	+	113533334	113537047	A3SS	0.5	50	50	ENSMUST00000036340.12	ENSMUSG00000034023.17	Fancd2	chr6	protein_coding	Fanconi anemia, complementation group D2
chr6	113547977	113549501	+	113547977	113549605	A3SS	0.5	50	50	ENSMUST00000036340.12	ENSMUSG00000034023.17	Fancd2	chr6	protein_coding	Fanconi anemia, complementation group D2
chr6	113601763	113605053	+	113601339	113605053	A5SS	0.33	50	50	ENSMUST00000035673.8	ENSMUSG00000033933.14	Vhl	chr6	protein_coding	von Hippel-Lindau tumor suppressor
chr6	113602012	113605053	+	113601339	113605053	A5SS	0.33	50	50	ENSMUST00000035673.8	ENSMUSG00000033933.14	Vhl	chr6	protein_coding	von Hippel-Lindau tumor suppressor
chr6	113602012	113605053	+	113601763	113605053	A5SS	0.33	50	50	ENSMUST00000128770.8	ENSMUSG00000033933.14	Vhl	chr6	protein_coding	von Hippel-Lindau tumor suppressor
chr6	113615602	113642664	+	113615602;113624782	113624600;113642664	ES	0.33	50	50	ENSMUST00000059286.14	ENSMUSG00000060477.15	Irak2	chr6	protein_coding	interleukin-1 receptor-associated kinase 2
chr6	113624782	113647160	+	113624782;113642807	113642664;113647160	ES	0.33	50	50	ENSMUST00000059286.14	ENSMUSG00000060477.15	Irak2	chr6	protein_coding	interleukin-1 receptor-associated kinase 2
chr6	113663919	113667774	+	113663919	113667744	A3SS	0.5	50	50	ENSMUST00000059286.14	ENSMUSG00000060477.15	Irak2	chr6	protein_coding	interleukin-1 receptor-associated kinase 2
chr6	113624664	113642664	+	113624782	113642664	A5SS	0.33	50	50	ENSMUST00000059286.14	ENSMUSG00000060477.15	Irak2	chr6	protein_coding	interleukin-1 receptor-associated kinase 2
chr6	113646056	113647160	+	113642807	113647160	A5SS	0.33	50	50	ENSMUST00000059286.14	ENSMUSG00000060477.15	Irak2	chr6	protein_coding	interleukin-1 receptor-associated kinase 2
chr6	113670067	113670629	+	113668032	113670629	A5SS	0.5	50	50	ENSMUST00000059286.14	ENSMUSG00000060477.15	Irak2	chr6	protein_coding	interleukin-1 receptor-associated kinase 2
chr6	113615602;113624664	113624600;113642664	+	113615602	113642664	cassetteExon	0.5	100	100	ENSMUST00000089023.11	ENSMUSG00000060477.15	Irak2	chr6	protein_coding	interleukin-1 receptor-associated kinase 2
chr6	113615602;113624782	113624600;113647160	+	113615602;113642807	113642664;113647160	MXE	0.5	100	100	ENSMUST00000089023.11	ENSMUSG00000060477.15	Irak2	chr6	protein_coding	interleukin-1 receptor-associated kinase 2
chr6	113624782	113647160	+	113624782	113642664	3pMXE	0.5	50	50	ENSMUST00000204091.2	ENSMUSG00000060477.15	Irak2	chr6	protein_coding	interleukin-1 receptor-associated kinase 2
chr6	113646056	113647160	+	113624782	113647160	A5SS	0.33	50	50	ENSMUST00000089022.9	ENSMUSG00000060477.15	Irak2	chr6	protein_coding	interleukin-1 receptor-associated kinase 2
chr6	113624782	113647160	+	113642807	113647160	A5SS&ES	0.33	50	50	ENSMUST00000204744.3	ENSMUSG00000060477.15	Irak2	chr6	protein_coding	interleukin-1 receptor-associated kinase 2
chr6	113684354	113687002	+	113684354;113686604	113686421;113687002	ES	0.5	50	50	ENSMUST00000089018.11	ENSMUSG00000056952.14	Tatdn2	chr6	protein_coding	TatD DNase domain containing 2
chr6	113679682	113680995	+	113679499	113680995	A5SS	0.5	50	50	ENSMUST00000089018.11	ENSMUSG00000056952.14	Tatdn2	chr6	protein_coding	TatD DNase domain containing 2
chr6	113694122	113696071	-	113694122	113694591	5pMXE	0.33	50	50	ENSMUST00000204533.3	ENSMUSG00000064177.9	Ghrl	chr6	protein_coding	ghrelin
chr6	113694122	113696283	-	113694122	113694591	5pMXE	0.33	50	50	ENSMUST00000204533.3	ENSMUSG00000064177.9	Ghrl	chr6	protein_coding	ghrelin
chr6	113693230	113696071	-	113693230;113694122	113694014;113696071	ES	0.5	50	50	ENSMUST00000064993.8	ENSMUSG00000064177.9	Ghrl	chr6	protein_coding	ghrelin
chr6	113694122	113696283	-	113694122;113696187	113696071;113696283	ES	0.33	50	50	ENSMUST00000064993.8	ENSMUSG00000064177.9	Ghrl	chr6	protein_coding	ghrelin
chr6	113696184	113696283	-	113696187	113696283	A3SS	0.33	50	50	ENSMUST00000064993.8	ENSMUSG00000064177.9	Ghrl	chr6	protein_coding	ghrelin
chr6	113693230;113694122	113694014;113696283	-	113693230;113696187	113696071;113696283	MXE	0.5	100	100	ENSMUST00000203363.3	ENSMUSG00000064177.9	Ghrl	chr6	protein_coding	ghrelin
chr6	113694122	113696283	-	113694122;113696184	113696071;113696283	ES	0.33	50	50	ENSMUST00000204163.3	ENSMUSG00000064177.9	Ghrl	chr6	protein_coding	ghrelin
chr6	113693230;113696184	113696071;113696283	-	113693230;113694122	113694014;113696283	MXE	0.5	100	100	ENSMUST00000203588.2	ENSMUSG00000064177.9	Ghrl	chr6	protein_coding	ghrelin
chr6	113707868	113712018	-	113707868;113711640	113711507;113712018	ES	0.5	50	50	ENSMUST00000032440.6	ENSMUSG00000030298.11	Sec13	chr6	protein_coding	SEC13 homolog, nuclear pore and COPII coat complex component
chr6	113957548	114019154	-	113957548	114018870	5pMXE	0.5	50	50	ENSMUST00000101045.10	ENSMUSG00000030302.17	Atp2b2	chr6	protein_coding	ATPase, Ca++ transporting, plasma membrane 2
chr6	113732349	113733793	-	113725809	113733793	A3SS	0.5	50	50	ENSMUST00000101045.10	ENSMUSG00000030302.17	Atp2b2	chr6	protein_coding	ATPase, Ca++ transporting, plasma membrane 2
chr6	113780740	113782422	-	113773358	113782422	A3SS	0.5	50	50	ENSMUST00000101045.10	ENSMUSG00000030302.17	Atp2b2	chr6	protein_coding	ATPase, Ca++ transporting, plasma membrane 2
chr6	113725809	113728525	-	113725809	113733793	A5SS	0.5	50	50	ENSMUST00000101045.10	ENSMUSG00000030302.17	Atp2b2	chr6	protein_coding	ATPase, Ca++ transporting, plasma membrane 2
chr6	113743128	113750234	-	113743128	113750222	A5SS	0.5	50	50	ENSMUST00000101045.10	ENSMUSG00000030302.17	Atp2b2	chr6	protein_coding	ATPase, Ca++ transporting, plasma membrane 2
chr6	113773358	113774071	-	113773358	113782422	A5SS	0.5	50	50	ENSMUST00000101045.10	ENSMUSG00000030302.17	Atp2b2	chr6	protein_coding	ATPase, Ca++ transporting, plasma membrane 2
chr6	113819606	113868214	-	113819606	113897470	A5SS	0.33	50	50	ENSMUST00000101045.10	ENSMUSG00000030302.17	Atp2b2	chr6	protein_coding	ATPase, Ca++ transporting, plasma membrane 2
chr6	113819606	113887242	-	113819606	113897470	A5SS	0.33	50	50	ENSMUST00000101045.10	ENSMUSG00000030302.17	Atp2b2	chr6	protein_coding	ATPase, Ca++ transporting, plasma membrane 2
chr6	113897564	113911442	-	113897564	113957503	A5SS	0.5	50	50	ENSMUST00000101045.10	ENSMUSG00000030302.17	Atp2b2	chr6	protein_coding	ATPase, Ca++ transporting, plasma membrane 2
chr6	113819606	113887242	-	113819606	113868214	5pMXE	0.33	50	50	ENSMUST00000089003.12	ENSMUSG00000030302.17	Atp2b2	chr6	protein_coding	ATPase, Ca++ transporting, plasma membrane 2
chr6	114277244	114278016	+	114259837	114278016	A5SS	0.5	50	50	ENSMUST00000032454.8	ENSMUSG00000030310.11	Slc6a1	chr6	protein_coding	solute carrier family 6 (neurotransmitter transporter, GABA), member 1
chr6	114278958	114279708	+	114279592	114279708	A5SS&ES	0.5	50	50	ENSMUST00000032454.8	ENSMUSG00000030310.11	Slc6a1	chr6	protein_coding	solute carrier family 6 (neurotransmitter transporter, GABA), member 1
chr6	114375380	114456686	+	114385881	114456686	A5SS&ES	0.2	50	50	ENSMUST00000088987.3	ENSMUSG00000053004.10	Hrh1	chr6	protein_coding	histamine receptor H1
chr6	114380858	114456686	+	114385881	114456686	A5SS&ES	0.2	50	50	ENSMUST00000088987.3	ENSMUSG00000053004.10	Hrh1	chr6	protein_coding	histamine receptor H1
chr6	114428153	114456686	+	114385881	114456686	A5SS	0.2	50	50	ENSMUST00000088987.3	ENSMUSG00000053004.10	Hrh1	chr6	protein_coding	histamine receptor H1
chr6	114435517	114456686	+	114385881	114456686	A5SS	0.2	50	50	ENSMUST00000088987.3	ENSMUSG00000053004.10	Hrh1	chr6	protein_coding	histamine receptor H1
chr6	114380858	114456686	+	114375380	114456686	A5SS	0.2	50	50	ENSMUST00000160212.2	ENSMUSG00000053004.10	Hrh1	chr6	protein_coding	histamine receptor H1
chr6	114428153	114456686	+	114375380	114456686	A5SS	0.2	50	50	ENSMUST00000160212.2	ENSMUSG00000053004.10	Hrh1	chr6	protein_coding	histamine receptor H1
chr6	114435517	114456686	+	114375380	114456686	A5SS	0.2	50	50	ENSMUST00000160212.2	ENSMUSG00000053004.10	Hrh1	chr6	protein_coding	histamine receptor H1
chr6	114380858;114428153	114428090;114456686	+	114380858	114456686	cassetteExon	0.5	100	100	ENSMUST00000161650.3	ENSMUSG00000053004.10	Hrh1	chr6	protein_coding	histamine receptor H1
chr6	114435517	114456686	+	114380858	114456686	A5SS	0.2	50	50	ENSMUST00000161650.3	ENSMUSG00000053004.10	Hrh1	chr6	protein_coding	histamine receptor H1
chr6	114435517	114456686	+	114428153	114456686	A5SS	0.25	50	50	ENSMUST00000161220.2	ENSMUSG00000053004.10	Hrh1	chr6	protein_coding	histamine receptor H1
chr6	114657200	114663031	+	114657200;114661478	114661362;114663031	ES	0.5	50	50	ENSMUST00000032457.17	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114690329	114753918	+	114690329;114701935	114701855;114753918	ES	0.5	50	50	ENSMUST00000032457.17	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114701935	114835952	+	114701935;114754040	114753918;114835952	ES	0.33	50	50	ENSMUST00000032457.17	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114620111;114622612	114622465;114649935	+	114620111	114649935	cassetteExon	0.5	100	100	ENSMUST00000032457.17	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114620111;114624018	114623898;114649935	+	114620111	114649935	cassetteExon	0.5	100	100	ENSMUST00000032457.17	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114620111;114648213	114648063;114649935	+	114620111	114649935	cassetteExon	0.5	100	100	ENSMUST00000032457.17	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114620111;114649804	114649752;114649935	+	114620111	114649935	cassetteExon	0.5	100	100	ENSMUST00000032457.17	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114625921	114649935	+	114620111	114649935	A5SS	0.14	50	50	ENSMUST00000032457.17	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114629512	114649935	+	114620111	114649935	A5SS	0.14	50	50	ENSMUST00000032457.17	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114700212	114701855	+	114690329	114701855	A5SS	0.5	50	50	ENSMUST00000032457.17	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114833287	114835952	+	114754040	114835952	A5SS	0.33	50	50	ENSMUST00000032457.17	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114620111;114622612	114622465;114649935	+	114620111;114648213	114648063;114649935	MXE	0.5	100	100	ENSMUST00000169310.10	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114620111;114624018	114623898;114649935	+	114620111;114648213	114648063;114649935	MXE	0.5	100	100	ENSMUST00000169310.10	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114620111;114649804	114649752;114649935	+	114620111;114648213	114648063;114649935	MXE	0.5	100	100	ENSMUST00000169310.10	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114648213;114649804	114649752;114649935	+	114648213	114649935	cassetteExon	0.5	100	100	ENSMUST00000169310.10	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114625921	114649935	+	114648213	114649935	A5SS&ES	0.14	50	50	ENSMUST00000169310.10	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114629512	114649935	+	114648213	114649935	A5SS&ES	0.14	50	50	ENSMUST00000169310.10	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114657200	114663031	+	114657200	114661362	3pMXE	0.5	50	50	ENSMUST00000183127.4	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114620111;114624018	114623898;114649935	+	114620111;114622612	114622465;114649935	MXE	0.5	100	100	ENSMUST00000182169.8	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114620111;114649804	114649752;114649935	+	114620111;114622612	114622465;114649935	MXE	0.5	100	100	ENSMUST00000182169.8	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114625921	114649935	+	114622612	114649935	A5SS	0.14	50	50	ENSMUST00000182169.8	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114629512	114649935	+	114622612	114649935	A5SS	0.14	50	50	ENSMUST00000182169.8	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114690329;114754040	114753918;114835952	+	114690329;114701935	114701855;114835952	MXE	0.5	100	100	ENSMUST00000183165.8	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114833287	114835952	+	114701935	114835952	A5SS	0.33	50	50	ENSMUST00000183165.8	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114620111	114649752	+	114620111;114624018	114623898;114649752	ES	0.25	50	50	ENSMUST00000182098.8	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114624018	114649935	+	114624018;114649804	114649752;114649935	ES	0.14	50	50	ENSMUST00000182098.8	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114620111;114622612	114622465;114649935	+	114620111;114649804	114623898;114649935	MXE	0.5	100	100	ENSMUST00000182098.8	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114620111;114648213	114648063;114649752	+	114620111;114624018	114623898;114649752	MXE	0.5	100	100	ENSMUST00000182098.8	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114620111;114648213	114648063;114649935	+	114620111;114649804	114623898;114649935	MXE	0.5	100	100	ENSMUST00000182098.8	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114625921	114649935	+	114649804	114649935	A5SS&ES	0.14	50	50	ENSMUST00000182098.8	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114629512	114649935	+	114649804	114649935	A5SS&ES	0.14	50	50	ENSMUST00000182098.8	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114635108	114649752	+	114624018	114649752	A5SS	0.25	50	50	ENSMUST00000182098.8	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114620111;114649804	114649752;114649935	+	114620111;114624018	114623898;114649935	MXE	0.5	100	100	ENSMUST00000182793.8	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114625921	114649935	+	114624018	114649935	A5SS	0.14	50	50	ENSMUST00000182793.8	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114629512	114649935	+	114624018	114649935	A5SS	0.14	50	50	ENSMUST00000182793.8	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114620111	114649752	+	114620111;114648213	114648063;114649752	ES	0.25	50	50	ENSMUST00000182902.8	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114620111;114622612	114622465;114649935	+	114620111;114649804	114648063;114649935	MXE	0.5	100	100	ENSMUST00000182902.8	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114620111;114624018	114623898;114649935	+	114620111;114649804	114648063;114649935	MXE	0.5	100	100	ENSMUST00000182902.8	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114635108	114649752	+	114648213	114649752	A5SS&ES	0.25	50	50	ENSMUST00000182902.8	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114635108	114649752	+	114620111	114649752	A5SS	0.25	50	50	ENSMUST00000182035.8	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114629512	114649935	+	114625921	114649935	A5SS	0.14	50	50	ENSMUST00000182510.8	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114648213	114649935	+	114649804	114649935	A5SS&ES	0.5	50	50	ENSMUST00000182771.4	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114663180	114672584	+	114663180	114678118	A3SS	0.5	50	50	ENSMUST00000203130.2	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114674113	114678118	+	114663180	114678118	A5SS	0.5	50	50	ENSMUST00000203130.2	ENSMUSG00000030314.17	Atg7	chr6	protein_coding	autophagy related 7
chr6	114841040	114867578	-	114841040	114852000	5pMXE	0.25	50	50	ENSMUST00000152710.8	ENSMUSG00000030315.16	Vgll4	chr6	protein_coding	vestigial like family member 4
chr6	114841040	114841414	-	114841040	114852000	A5SS	0.25	50	50	ENSMUST00000152710.8	ENSMUSG00000030315.16	Vgll4	chr6	protein_coding	vestigial like family member 4
chr6	114841040	114851726	-	114841040	114852000	A5SS	0.25	50	50	ENSMUST00000152710.8	ENSMUSG00000030315.16	Vgll4	chr6	protein_coding	vestigial like family member 4
chr6	114867767	114934897	-	114867767	114898278	5pMXE	0.5	50	50	ENSMUST00000032459.14	ENSMUSG00000030315.16	Vgll4	chr6	protein_coding	vestigial like family member 4
chr6	114841040	114841414	-	114841040	114867578	A5SS	0.25	50	50	ENSMUST00000032459.14	ENSMUSG00000030315.16	Vgll4	chr6	protein_coding	vestigial like family member 4
chr6	114841040	114851726	-	114841040	114867578	A5SS	0.25	50	50	ENSMUST00000032459.14	ENSMUSG00000030315.16	Vgll4	chr6	protein_coding	vestigial like family member 4
chr6	114841040	114851726	-	114841040	114841414	5pMXE	0.25	50	50	ENSMUST00000123478.8	ENSMUSG00000030315.16	Vgll4	chr6	protein_coding	vestigial like family member 4
chr6	114934972	114946674	-	114934972	114945821	5pMXE	0.5	50	50	ENSMUST00000147639.8	ENSMUSG00000030315.16	Vgll4	chr6	protein_coding	vestigial like family member 4
chr6	115009273;115011211	115011117;115011912	-	115009273	115011912	cassetteExon	0.5	100	100	ENSMUST00000032461.12	ENSMUSG00000030316.14	Tamm41	chr6	protein_coding	TAM41 mitochondrial translocator assembly and maintenance homolog
chr6	114989280	114993044	-	114989284	114993044	A3SS	0.5	50	50	ENSMUST00000032461.12	ENSMUSG00000030316.14	Tamm41	chr6	protein_coding	TAM41 mitochondrial translocator assembly and maintenance homolog
chr6	114989280	115002235	-	114993189	115002235	A3SS&ES	0.5	50	50	ENSMUST00000032461.12	ENSMUSG00000030316.14	Tamm41	chr6	protein_coding	TAM41 mitochondrial translocator assembly and maintenance homolog
chr6	115008723	115009181	-	115002385	115009181	A3SS	0.5	50	50	ENSMUST00000032461.12	ENSMUSG00000030316.14	Tamm41	chr6	protein_coding	TAM41 mitochondrial translocator assembly and maintenance homolog
chr6	114989280	115002235	-	114989280	114993044	5pMXE	0.5	50	50	ENSMUST00000144969.2	ENSMUSG00000030316.14	Tamm41	chr6	protein_coding	TAM41 mitochondrial translocator assembly and maintenance homolog
chr6	114989280	115002235	-	114989280;114993189	114993044;115002235	ES	0.5	50	50	ENSMUST00000172495.8	ENSMUSG00000030316.14	Tamm41	chr6	protein_coding	TAM41 mitochondrial translocator assembly and maintenance homolog
chr6	115203227	115212975	+	115112421	115212975	A5SS	0.5	50	50	ENSMUST00000203768.3	ENSMUSG00000009394.14	Syn2	chr6	protein_coding	synapsin II
chr6	115216066	115216320	+	115214307	115216320	A5SS	0.5	50	50	ENSMUST00000203768.3	ENSMUSG00000009394.14	Syn2	chr6	protein_coding	synapsin II
chr6	115360704	115362558	+	115360704	115416801	A3SS	0.5	50	50	ENSMUST00000171644.8	ENSMUSG00000000440.13	Pparg	chr6	protein_coding	peroxisome proliferator activated receptor gamma
chr6	115339378	115360640	+	115338331	115360640	A5SS	0.33	50	50	ENSMUST00000171644.8	ENSMUSG00000000440.13	Pparg	chr6	protein_coding	peroxisome proliferator activated receptor gamma
chr6	115343040	115360640	+	115338331	115360640	A5SS	0.33	50	50	ENSMUST00000171644.8	ENSMUSG00000000440.13	Pparg	chr6	protein_coding	peroxisome proliferator activated receptor gamma
chr6	115384281	115416801	+	115360704	115416801	A5SS	0.33	50	50	ENSMUST00000171644.8	ENSMUSG00000000440.13	Pparg	chr6	protein_coding	peroxisome proliferator activated receptor gamma
chr6	115399153	115416801	+	115360704	115416801	A5SS	0.33	50	50	ENSMUST00000171644.8	ENSMUSG00000000440.13	Pparg	chr6	protein_coding	peroxisome proliferator activated receptor gamma
chr6	115339378;115343040	115342975;115360640	+	115339378	115360640	cassetteExon	0.5	100	100	ENSMUST00000203732.3	ENSMUSG00000000440.13	Pparg	chr6	protein_coding	peroxisome proliferator activated receptor gamma
chr6	115399153	115416801	+	115384281	115416801	A5SS	0.33	50	50	ENSMUST00000205213.3	ENSMUSG00000000440.13	Pparg	chr6	protein_coding	peroxisome proliferator activated receptor gamma
chr6	115524991	115530952	+	115524991;115526955	115526874;115530952	ES	0.5	50	50	ENSMUST00000130425.8	ENSMUSG00000042389.14	Tsen2	chr6	protein_coding	tRNA splicing endonuclease subunit 2
chr6	115563765;115566355	115566306;115569235	-	115563765	115569235	cassetteExon	0.5	100	100	ENSMUST00000088962.5	ENSMUSG00000068011.5	Mkrn2os	chr6	protein_coding	makorin, ring finger protein 2, opposite strand
chr6	115587661	115590288	+	115587661;115588900	115588596;115590288	ES	0.5	50	50	ENSMUST00000000449.9	ENSMUSG00000000439.10	Mkrn2	chr6	protein_coding	makorin, ring finger protein, 2
chr6	115603927;115608329	115608176;115609858	-	115603927	115609858	cassetteExon	0.5	100	100	ENSMUST00000130528.8	ENSMUSG00000000441.18	Raf1	chr6	protein_coding	v-raf-leukemia viral oncogene 1
chr6	115603927	115607602	-	115603927	115609858	A5SS	0.33	50	50	ENSMUST00000130528.8	ENSMUSG00000000441.18	Raf1	chr6	protein_coding	v-raf-leukemia viral oncogene 1
chr6	115621603	115653197	-	115621603	115652650	5pMXE	0.5	50	50	ENSMUST00000112949.8	ENSMUSG00000000441.18	Raf1	chr6	protein_coding	v-raf-leukemia viral oncogene 1
chr6	115603927;115607661	115607602;115608176	-	115603927	115608176	cassetteExon	0.5	100	100	ENSMUST00000112949.8	ENSMUSG00000000441.18	Raf1	chr6	protein_coding	v-raf-leukemia viral oncogene 1
chr6	115597308	115598777	-	115597288	115598777	A3SS	0.5	50	50	ENSMUST00000112949.8	ENSMUSG00000000441.18	Raf1	chr6	protein_coding	v-raf-leukemia viral oncogene 1
chr6	115603927	115608176	-	115603927	115607602	5pMXE	0.33	50	50	ENSMUST00000124553.4	ENSMUSG00000000441.18	Raf1	chr6	protein_coding	v-raf-leukemia viral oncogene 1
chr6	115603927	115609858	-	115608329	115609858	3pMXE	0.5	50	50	ENSMUST00000127503.2	ENSMUSG00000000441.18	Raf1	chr6	protein_coding	v-raf-leukemia viral oncogene 1
chr6	115713397	115718502	-	115713397;115715983	115715909;115718502	ES	0.5	50	50	ENSMUST00000112946.8	ENSMUSG00000059900.15	Tmem40	chr6	protein_coding	transmembrane protein 40
chr6	115719348	115739234	-	115719348	115735899	5pMXE	0.5	50	50	ENSMUST00000112946.8	ENSMUSG00000059900.15	Tmem40	chr6	protein_coding	transmembrane protein 40
chr6	115711806	115711888	-	115711806	115713344	A5SS	0.5	50	50	ENSMUST00000112946.8	ENSMUSG00000059900.15	Tmem40	chr6	protein_coding	transmembrane protein 40
chr6	115794390;115794784	115794674;115797006	-	115794390	115797006	cassetteExon	0.5	100	100	ENSMUST00000032468.12	ENSMUSG00000030321.16	Efcab12	chr6	protein_coding	EF-hand calcium binding domain 12
chr6	115813176	115814159	+	115801675	115814159	A5SS	0.5	50	50	ENSMUST00000203044.3	ENSMUSG00000107429.3	Gm44206	chr6	lncRNA	predicted gene, 44206
chr6	115822409	115825867	-	115822409;115822578	115822504;115825867	ES	0.5	50	50	ENSMUST00000032469.13	ENSMUSG00000030322.13	Mbd4	chr6	protein_coding	methyl-CpG binding domain protein 4
chr6	115822409	115825356	-	115822409	115822504	A5SS&ES	0.33	50	50	ENSMUST00000032469.13	ENSMUSG00000030322.13	Mbd4	chr6	protein_coding	methyl-CpG binding domain protein 4
chr6	115822578	115825356	-	115822578	115825867	A5SS	0.5	50	50	ENSMUST00000032469.13	ENSMUSG00000030322.13	Mbd4	chr6	protein_coding	methyl-CpG binding domain protein 4
chr6	115827800	115829646	-	115827800	115830098	A5SS	0.5	50	50	ENSMUST00000032469.13	ENSMUSG00000030322.13	Mbd4	chr6	protein_coding	methyl-CpG binding domain protein 4
chr6	115822409	115825867	-	115822409	115825356	5pMXE	0.33	50	50	ENSMUST00000133830.8	ENSMUSG00000030322.13	Mbd4	chr6	protein_coding	methyl-CpG binding domain protein 4
chr6	115822409;115822578	115822504;115825356	-	115822409	115825356	cassetteExon	0.5	100	100	ENSMUST00000133830.8	ENSMUSG00000030322.13	Mbd4	chr6	protein_coding	methyl-CpG binding domain protein 4
chr6	115822409	115825867	-	115822409	115822504	A5SS&ES	0.33	50	50	ENSMUST00000147282.4	ENSMUSG00000030322.13	Mbd4	chr6	protein_coding	methyl-CpG binding domain protein 4
chr6	115830670;115839197	115838965;115839676	+	115830670	115839676	cassetteExon	0.5	100	100	ENSMUST00000112925.8	ENSMUSG00000030323.14	Ift122	chr6	protein_coding	intraflagellar transport 122
chr6	115858584;115859784	115859608;115861297	+	115858584	115861297	cassetteExon	0.5	100	100	ENSMUST00000112925.8	ENSMUSG00000030323.14	Ift122	chr6	protein_coding	intraflagellar transport 122
chr6	115894028;115895027	115894904;115897312	+	115894028	115897312	cassetteExon	0.5	100	100	ENSMUST00000112925.8	ENSMUSG00000030323.14	Ift122	chr6	protein_coding	intraflagellar transport 122
chr6	115857671	115858299	+	115857671	115858438	A3SS	0.5	50	50	ENSMUST00000112925.8	ENSMUSG00000030323.14	Ift122	chr6	protein_coding	intraflagellar transport 122
chr6	115890935	115892693	+	115890935	115892868	A3SS	0.5	50	50	ENSMUST00000112925.8	ENSMUSG00000030323.14	Ift122	chr6	protein_coding	intraflagellar transport 122
chr6	115893008	115893931	+	115893008	115893934	A3SS	0.5	50	50	ENSMUST00000112925.8	ENSMUSG00000030323.14	Ift122	chr6	protein_coding	intraflagellar transport 122
chr6	115854316	115854436	+	115852283	115854436	A5SS	0.5	50	50	ENSMUST00000112925.8	ENSMUSG00000030323.14	Ift122	chr6	protein_coding	intraflagellar transport 122
chr6	115863160	115863870	+	115861372	115863870	A5SS	0.5	50	50	ENSMUST00000112925.8	ENSMUSG00000030323.14	Ift122	chr6	protein_coding	intraflagellar transport 122
chr6	115876345	115876440	+	115871380	115876440	A5SS	0.5	50	50	ENSMUST00000112925.8	ENSMUSG00000030323.14	Ift122	chr6	protein_coding	intraflagellar transport 122
chr6	115909712	115910818	+	115909326	115910818	A5SS	0.5	50	50	ENSMUST00000032471.9	ENSMUSG00000030324.9	Rho	chr6	protein_coding	rhodopsin
chr6	115911490	115912070	+	115910986	115912070	A5SS	0.5	50	50	ENSMUST00000032471.9	ENSMUSG00000030324.9	Rho	chr6	protein_coding	rhodopsin
chr6	115911490	115912215	+	115911490	115912070	A3SS	0.5	50	50	ENSMUST00000203877.2	ENSMUSG00000030324.9	Rho	chr6	protein_coding	rhodopsin
chr6	115922043;115923997	115923919;115924596	+	115922043	115924596	cassetteExon	0.5	100	100	ENSMUST00000037831.14	ENSMUSG00000042279.14	H1f8	chr6	protein_coding	H1.8 linker histone
chr6	115925874	115926650	+	115925874	115926647	A3SS	0.5	50	50	ENSMUST00000037831.14	ENSMUSG00000042279.14	H1f8	chr6	protein_coding	H1.8 linker histone
chr6	115926673	115926851	+	115926702	115926851	A5SS	0.33	50	50	ENSMUST00000037831.14	ENSMUSG00000042279.14	H1f8	chr6	protein_coding	H1.8 linker histone
chr6	115926706	115926851	+	115926702	115926851	A5SS	0.33	50	50	ENSMUST00000037831.14	ENSMUSG00000042279.14	H1f8	chr6	protein_coding	H1.8 linker histone
chr6	115926673	115926851	+	115926706	115926851	A5SS	0.33	50	50	ENSMUST00000161969.4	ENSMUSG00000042279.14	H1f8	chr6	protein_coding	H1.8 linker histone
chr6	115944747	115944932	-	115944849	115944932	A3SS	0.5	50	50	ENSMUST00000015511.15	ENSMUSG00000030123.16	Plxnd1	chr6	protein_coding	plexin D1
chr6	116020766;116070113	116069991;116110728	-	116020766	116110728	cassetteExon	0.5	100	100	ENSMUST00000088896.10	ENSMUSG00000030126.18	Tmcc1	chr6	protein_coding	transmembrane and coiled coil domains 1
chr6	116020766;116078622	116078491;116110728	-	116020766	116110728	cassetteExon	0.5	100	100	ENSMUST00000088896.10	ENSMUSG00000030126.18	Tmcc1	chr6	protein_coding	transmembrane and coiled coil domains 1
chr6	116020766;116084477	116084273;116110728	-	116020766	116110728	cassetteExon	0.5	100	100	ENSMUST00000088896.10	ENSMUSG00000030126.18	Tmcc1	chr6	protein_coding	transmembrane and coiled coil domains 1
chr6	116108850	116110728	-	116020766	116110728	A3SS	0.2	50	50	ENSMUST00000088896.10	ENSMUSG00000030126.18	Tmcc1	chr6	protein_coding	transmembrane and coiled coil domains 1
chr6	116020766	116033487	-	116020766	116110728	A5SS	0.14	50	50	ENSMUST00000088896.10	ENSMUSG00000030126.18	Tmcc1	chr6	protein_coding	transmembrane and coiled coil domains 1
chr6	116020766	116033768	-	116020766	116110728	A5SS	0.14	50	50	ENSMUST00000088896.10	ENSMUSG00000030126.18	Tmcc1	chr6	protein_coding	transmembrane and coiled coil domains 1
chr6	116020766	116049973	-	116020766	116110728	A5SS	0.14	50	50	ENSMUST00000088896.10	ENSMUSG00000030126.18	Tmcc1	chr6	protein_coding	transmembrane and coiled coil domains 1
chr6	116115211	116148607	-	116115211	116170219	A5SS	0.5	50	50	ENSMUST00000088896.10	ENSMUSG00000030126.18	Tmcc1	chr6	protein_coding	transmembrane and coiled coil domains 1
chr6	116020766	116110728	-	116020766	116084273	5pMXE	0.14	50	50	ENSMUST00000204353.3	ENSMUSG00000030126.18	Tmcc1	chr6	protein_coding	transmembrane and coiled coil domains 1
chr6	116020766	116033487	-	116020766	116084273	A5SS	0.14	50	50	ENSMUST00000204353.3	ENSMUSG00000030126.18	Tmcc1	chr6	protein_coding	transmembrane and coiled coil domains 1
chr6	116020766	116033768	-	116020766	116084273	A5SS	0.14	50	50	ENSMUST00000204353.3	ENSMUSG00000030126.18	Tmcc1	chr6	protein_coding	transmembrane and coiled coil domains 1
chr6	116020766	116049973	-	116020766	116084273	A5SS	0.14	50	50	ENSMUST00000204353.3	ENSMUSG00000030126.18	Tmcc1	chr6	protein_coding	transmembrane and coiled coil domains 1
chr6	116020766	116069991	-	116020766	116084273	A5SS	0.14	50	50	ENSMUST00000204353.3	ENSMUSG00000030126.18	Tmcc1	chr6	protein_coding	transmembrane and coiled coil domains 1
chr6	116020766	116078491	-	116020766	116084273	A5SS	0.14	50	50	ENSMUST00000204353.3	ENSMUSG00000030126.18	Tmcc1	chr6	protein_coding	transmembrane and coiled coil domains 1
chr6	116020766;116070113	116069991;116110728	-	116020766;116078622	116078491;116110728	MXE	0.5	100	100	ENSMUST00000032222.16	ENSMUSG00000030126.18	Tmcc1	chr6	protein_coding	transmembrane and coiled coil domains 1
chr6	116020766;116084477	116084273;116110728	-	116020766;116078622	116078491;116110728	MXE	0.5	100	100	ENSMUST00000032222.16	ENSMUSG00000030126.18	Tmcc1	chr6	protein_coding	transmembrane and coiled coil domains 1
chr6	116108850	116110728	-	116078622	116110728	A3SS	0.2	50	50	ENSMUST00000032222.16	ENSMUSG00000030126.18	Tmcc1	chr6	protein_coding	transmembrane and coiled coil domains 1
chr6	116020766	116033487	-	116020766	116078491	A5SS	0.14	50	50	ENSMUST00000032222.16	ENSMUSG00000030126.18	Tmcc1	chr6	protein_coding	transmembrane and coiled coil domains 1
chr6	116020766	116033768	-	116020766	116078491	A5SS	0.14	50	50	ENSMUST00000032222.16	ENSMUSG00000030126.18	Tmcc1	chr6	protein_coding	transmembrane and coiled coil domains 1
chr6	116020766	116049973	-	116020766	116078491	A5SS	0.14	50	50	ENSMUST00000032222.16	ENSMUSG00000030126.18	Tmcc1	chr6	protein_coding	transmembrane and coiled coil domains 1
chr6	116020766	116049973	-	116020766	116033487	5pMXE	0.14	50	50	ENSMUST00000172510.4	ENSMUSG00000030126.18	Tmcc1	chr6	protein_coding	transmembrane and coiled coil domains 1
chr6	116020766	116069991	-	116020766	116033487	5pMXE	0.14	50	50	ENSMUST00000172510.4	ENSMUSG00000030126.18	Tmcc1	chr6	protein_coding	transmembrane and coiled coil domains 1
chr6	116020766	116033768	-	116020766	116033487	A5SS	0.14	50	50	ENSMUST00000172510.4	ENSMUSG00000030126.18	Tmcc1	chr6	protein_coding	transmembrane and coiled coil domains 1
chr6	116020766;116084477	116084273;116110728	-	116020766;116070113	116069991;116110728	MXE	0.5	100	100	ENSMUST00000173110.2	ENSMUSG00000030126.18	Tmcc1	chr6	protein_coding	transmembrane and coiled coil domains 1
chr6	116108850	116110728	-	116070113	116110728	A3SS	0.2	50	50	ENSMUST00000173110.2	ENSMUSG00000030126.18	Tmcc1	chr6	protein_coding	transmembrane and coiled coil domains 1
chr6	116020766	116033768	-	116020766	116069991	A5SS	0.14	50	50	ENSMUST00000173110.2	ENSMUSG00000030126.18	Tmcc1	chr6	protein_coding	transmembrane and coiled coil domains 1
chr6	116020766	116049973	-	116020766	116069991	A5SS	0.14	50	50	ENSMUST00000173110.2	ENSMUSG00000030126.18	Tmcc1	chr6	protein_coding	transmembrane and coiled coil domains 1
chr6	116020766	116049973	-	116020766	116033768	5pMXE	0.14	50	50	ENSMUST00000173140.4	ENSMUSG00000030126.18	Tmcc1	chr6	protein_coding	transmembrane and coiled coil domains 1
chr6	116108850	116110728	-	116084477	116110728	A3SS	0.2	50	50	ENSMUST00000172909.2	ENSMUSG00000030126.18	Tmcc1	chr6	protein_coding	transmembrane and coiled coil domains 1
chr6	116201994	116204307	+	116201994;116203447	116203385;116204307	ES	0.5	50	50	ENSMUST00000036759.11	ENSMUSG00000024104.12	Washc2	chr6	protein_coding	WASH complex subunit 2`
chr6	116185232	116185915	+	116185290	116185915	A5SS	0.33	50	50	ENSMUST00000036759.11	ENSMUSG00000024104.12	Washc2	chr6	protein_coding	WASH complex subunit 2`
chr6	116185288	116185915	+	116185290	116185915	A5SS	0.33	50	50	ENSMUST00000036759.11	ENSMUSG00000024104.12	Washc2	chr6	protein_coding	WASH complex subunit 2`
chr6	116185232	116185915	+	116185288	116185915	A5SS	0.33	50	50	ENSMUST00000203286.3	ENSMUSG00000024104.12	Washc2	chr6	protein_coding	WASH complex subunit 2`
chr6	116201994	116204307	+	116203447	116204307	5pMXE	0.5	50	50	ENSMUST00000203297.2	ENSMUSG00000024104.12	Washc2	chr6	protein_coding	WASH complex subunit 2`
chr6	116250833	116264943	+	116250833;116262882	116262815;116264943	ES	0.33	50	50	ENSMUST00000222819.2	ENSMUSG00000042213.18	Zfand4	chr6	protein_coding	zinc finger, AN1-type domain 4
chr6	116265129	116290806	+	116265129;116282722	116282578;116290806	ES	0.5	50	50	ENSMUST00000222819.2	ENSMUSG00000042213.18	Zfand4	chr6	protein_coding	zinc finger, AN1-type domain 4
chr6	116250833;116261776	116261701;116262815	+	116250833	116262815	cassetteExon	0.5	100	100	ENSMUST00000222819.2	ENSMUSG00000042213.18	Zfand4	chr6	protein_coding	zinc finger, AN1-type domain 4
chr6	116250833	116251777	+	116250833	116262815	A3SS	0.2	50	50	ENSMUST00000222819.2	ENSMUSG00000042213.18	Zfand4	chr6	protein_coding	zinc finger, AN1-type domain 4
chr6	116243541	116250534	+	116241273	116250534	A5SS	0.5	50	50	ENSMUST00000222819.2	ENSMUSG00000042213.18	Zfand4	chr6	protein_coding	zinc finger, AN1-type domain 4
chr6	116263573	116264943	+	116262882	116264943	A5SS	0.33	50	50	ENSMUST00000222819.2	ENSMUSG00000042213.18	Zfand4	chr6	protein_coding	zinc finger, AN1-type domain 4
chr6	116279380	116282578	+	116265129	116282578	A5SS	0.33	50	50	ENSMUST00000222819.2	ENSMUSG00000042213.18	Zfand4	chr6	protein_coding	zinc finger, AN1-type domain 4
chr6	116250833;116251986	116251777;116261701	+	116250833	116261701	cassetteExon	0.5	100	100	ENSMUST00000112900.9	ENSMUSG00000042213.18	Zfand4	chr6	protein_coding	zinc finger, AN1-type domain 4
chr6	116265129	116290806	+	116282722	116290806	A5SS&ES	0.5	50	50	ENSMUST00000112900.9	ENSMUSG00000042213.18	Zfand4	chr6	protein_coding	zinc finger, AN1-type domain 4
chr6	116265129	116305168	+	116292603	116305168	A5SS&ES	0.5	50	50	ENSMUST00000112900.9	ENSMUSG00000042213.18	Zfand4	chr6	protein_coding	zinc finger, AN1-type domain 4
chr6	116265129	116290806	+	116265129	116282578	3pMXE	0.33	50	50	ENSMUST00000220845.2	ENSMUSG00000042213.18	Zfand4	chr6	protein_coding	zinc finger, AN1-type domain 4
chr6	116265129	116305168	+	116265129	116282578	3pMXE	0.33	50	50	ENSMUST00000220845.2	ENSMUSG00000042213.18	Zfand4	chr6	protein_coding	zinc finger, AN1-type domain 4
chr6	116250833	116282578	+	116250833	116261701	A3SS&ES	0.2	50	50	ENSMUST00000223495.2	ENSMUSG00000042213.18	Zfand4	chr6	protein_coding	zinc finger, AN1-type domain 4
chr6	116265129	116290806	+	116265129	116305168	A3SS	0.33	50	50	ENSMUST00000223495.2	ENSMUSG00000042213.18	Zfand4	chr6	protein_coding	zinc finger, AN1-type domain 4
chr6	116250833;116265129	116264943;116282578	+	116250833	116282578	cassetteExon	0.5	100	100	ENSMUST00000222494.2	ENSMUSG00000042213.18	Zfand4	chr6	protein_coding	zinc finger, AN1-type domain 4
chr6	116250833;116265129	116264943;116290806	+	116250833;116282722	116282578;116290806	MXE	0.5	100	100	ENSMUST00000222494.2	ENSMUSG00000042213.18	Zfand4	chr6	protein_coding	zinc finger, AN1-type domain 4
chr6	116250833;116265129	116264943;116305168	+	116250833;116292603	116282578;116305168	MXE	0.5	100	100	ENSMUST00000222494.2	ENSMUSG00000042213.18	Zfand4	chr6	protein_coding	zinc finger, AN1-type domain 4
chr6	116250833	116251777	+	116250833	116282578	A3SS	0.2	50	50	ENSMUST00000222494.2	ENSMUSG00000042213.18	Zfand4	chr6	protein_coding	zinc finger, AN1-type domain 4
chr6	116250833	116262815	+	116250833	116282578	A3SS	0.2	50	50	ENSMUST00000222494.2	ENSMUSG00000042213.18	Zfand4	chr6	protein_coding	zinc finger, AN1-type domain 4
chr6	116279380	116282578	+	116250833	116282578	A5SS	0.33	50	50	ENSMUST00000222494.2	ENSMUSG00000042213.18	Zfand4	chr6	protein_coding	zinc finger, AN1-type domain 4
chr6	116250833	116251777	+	116250833	116264943	A3SS	0.2	50	50	ENSMUST00000221239.2	ENSMUSG00000042213.18	Zfand4	chr6	protein_coding	zinc finger, AN1-type domain 4
chr6	116250833	116261701	+	116250833	116264943	A3SS	0.2	50	50	ENSMUST00000221239.2	ENSMUSG00000042213.18	Zfand4	chr6	protein_coding	zinc finger, AN1-type domain 4
chr6	116263573	116264943	+	116250833	116264943	A5SS	0.33	50	50	ENSMUST00000221239.2	ENSMUSG00000042213.18	Zfand4	chr6	protein_coding	zinc finger, AN1-type domain 4
chr6	116250833	116262815	+	116261776	116262815	5pMXE	0.5	50	50	ENSMUST00000222144.2	ENSMUSG00000042213.18	Zfand4	chr6	protein_coding	zinc finger, AN1-type domain 4
chr6	116315176	116353654	+	116315176;116315451	116315347;116353654	ES	0.25	50	50	ENSMUST00000079012.13	ENSMUSG00000025702.16	Marchf8	chr6	protein_coding	membrane associated ring-CH-type finger 8
chr6	116315451	116369485	+	116315451;116353824	116353654;116369485	ES	0.33	50	50	ENSMUST00000079012.13	ENSMUSG00000025702.16	Marchf8	chr6	protein_coding	membrane associated ring-CH-type finger 8
chr6	116315451;116353136	116353097;116353654	+	116315451	116353654	cassetteExon	0.5	100	100	ENSMUST00000079012.13	ENSMUSG00000025702.16	Marchf8	chr6	protein_coding	membrane associated ring-CH-type finger 8
chr6	116378083	116378298	+	116378083	116380381	A3SS	0.33	50	50	ENSMUST00000079012.13	ENSMUSG00000025702.16	Marchf8	chr6	protein_coding	membrane associated ring-CH-type finger 8
chr6	116378083	116378377	+	116378083	116380381	A3SS	0.33	50	50	ENSMUST00000079012.13	ENSMUSG00000025702.16	Marchf8	chr6	protein_coding	membrane associated ring-CH-type finger 8
chr6	116327917	116353654	+	116315451	116353654	A5SS	0.25	50	50	ENSMUST00000079012.13	ENSMUSG00000025702.16	Marchf8	chr6	protein_coding	membrane associated ring-CH-type finger 8
chr6	116363265	116369485	+	116353824	116369485	A5SS	0.33	50	50	ENSMUST00000079012.13	ENSMUSG00000025702.16	Marchf8	chr6	protein_coding	membrane associated ring-CH-type finger 8
chr6	116379143	116380381	+	116378083	116380381	A5SS	0.5	50	50	ENSMUST00000079012.13	ENSMUSG00000025702.16	Marchf8	chr6	protein_coding	membrane associated ring-CH-type finger 8
chr6	116382193	116382596	+	116380561	116382596	A5SS	0.5	50	50	ENSMUST00000079012.13	ENSMUSG00000025702.16	Marchf8	chr6	protein_coding	membrane associated ring-CH-type finger 8
chr6	116315176	116353654	+	116315451	116353654	A5SS	0.25	50	50	ENSMUST00000101032.10	ENSMUSG00000025702.16	Marchf8	chr6	protein_coding	membrane associated ring-CH-type finger 8
chr6	116378083	116380381	+	116378083;116379143	116378298;116380381	ES	0.5	50	50	ENSMUST00000123405.8	ENSMUSG00000025702.16	Marchf8	chr6	protein_coding	membrane associated ring-CH-type finger 8
chr6	116378083	116378377	+	116378083	116378298	A3SS	0.33	50	50	ENSMUST00000123405.8	ENSMUSG00000025702.16	Marchf8	chr6	protein_coding	membrane associated ring-CH-type finger 8
chr6	116315176;116315451	116315347;116369485	+	116315176;116353824	116353654;116369485	MXE	0.5	100	100	ENSMUST00000204657.3	ENSMUSG00000025702.16	Marchf8	chr6	protein_coding	membrane associated ring-CH-type finger 8
chr6	116327917	116353654	+	116315176	116353654	A5SS	0.25	50	50	ENSMUST00000204657.3	ENSMUSG00000025702.16	Marchf8	chr6	protein_coding	membrane associated ring-CH-type finger 8
chr6	116353136	116353654	+	116315176	116353654	A5SS	0.25	50	50	ENSMUST00000204657.3	ENSMUSG00000025702.16	Marchf8	chr6	protein_coding	membrane associated ring-CH-type finger 8
chr6	116315451	116353097	+	116315451	116369485	A3SS	0.33	50	50	ENSMUST00000203193.3	ENSMUSG00000025702.16	Marchf8	chr6	protein_coding	membrane associated ring-CH-type finger 8
chr6	116363265	116369485	+	116315451	116369485	A5SS	0.33	50	50	ENSMUST00000203193.3	ENSMUSG00000025702.16	Marchf8	chr6	protein_coding	membrane associated ring-CH-type finger 8
chr6	116327917	116353097	+	116315451	116353097	A5SS	0.5	50	50	ENSMUST00000126376.8	ENSMUSG00000025702.16	Marchf8	chr6	protein_coding	membrane associated ring-CH-type finger 8
chr6	116327917	116353654	+	116353136	116353654	A5SS&ES	0.25	50	50	ENSMUST00000126376.8	ENSMUSG00000025702.16	Marchf8	chr6	protein_coding	membrane associated ring-CH-type finger 8
chr6	116327917;116353136	116353097;116353654	+	116327917	116353654	cassetteExon	0.5	100	100	ENSMUST00000140884.8	ENSMUSG00000025702.16	Marchf8	chr6	protein_coding	membrane associated ring-CH-type finger 8
chr6	116315451	116369485	+	116353824	116369485	5pMXE	0.33	50	50	ENSMUST00000130445.8	ENSMUSG00000025702.16	Marchf8	chr6	protein_coding	membrane associated ring-CH-type finger 8
chr6	116387859	116390083	-	116387859;116389591	116389421;116390083	ES	0.5	50	50	ENSMUST00000026795.13	ENSMUSG00000025701.13	Alox5	chr6	protein_coding	arachidonate 5-lipoxygenase
chr6	116390524	116391484	-	116390524;116390877	116390699;116391484	ES	0.33	50	50	ENSMUST00000026795.13	ENSMUSG00000025701.13	Alox5	chr6	protein_coding	arachidonate 5-lipoxygenase
chr6	116390781	116391484	-	116390877	116391484	A3SS	0.33	50	50	ENSMUST00000026795.13	ENSMUSG00000025701.13	Alox5	chr6	protein_coding	arachidonate 5-lipoxygenase
chr6	116401204	116401801	-	116401204	116404104	A5SS	0.5	50	50	ENSMUST00000026795.13	ENSMUSG00000025701.13	Alox5	chr6	protein_coding	arachidonate 5-lipoxygenase
chr6	116387859	116390083	-	116387859	116389421	5pMXE	0.5	50	50	ENSMUST00000169625.2	ENSMUSG00000025701.13	Alox5	chr6	protein_coding	arachidonate 5-lipoxygenase
chr6	116390524;116390781	116390699;116391484	-	116390524	116391484	cassetteExon	0.5	100	100	ENSMUST00000203722.3	ENSMUSG00000025701.13	Alox5	chr6	protein_coding	arachidonate 5-lipoxygenase
chr6	116387859	116390083	-	116389591	116390083	3pMXE	0.5	50	50	ENSMUST00000167585.2	ENSMUSG00000025701.13	Alox5	chr6	protein_coding	arachidonate 5-lipoxygenase
chr6	116390524	116391484	-	116390524	116390699	5pMXE	0.5	50	50	ENSMUST00000167585.2	ENSMUSG00000025701.13	Alox5	chr6	protein_coding	arachidonate 5-lipoxygenase
chr6	116490504	116492667	+	116483888	116492667	A5SS	0.33	50	50	ENSMUST00000075756.3	ENSMUSG00000053251.7	Olfr212	chr6	protein_coding	olfactory receptor 212
chr6	116490606	116492667	+	116483888	116492667	A5SS	0.33	50	50	ENSMUST00000075756.3	ENSMUSG00000053251.7	Olfr212	chr6	protein_coding	olfactory receptor 212
chr6	116490606	116492667	+	116490504	116492667	A5SS	0.33	50	50	ENSMUST00000218028.2	ENSMUSG00000053251.7	Olfr212	chr6	protein_coding	olfactory receptor 212
chr6	116531937	116533361	+	116531937	116533358	A3SS	0.5	50	50	ENSMUST00000217313.2	ENSMUSG00000051046.8	Olfr214	chr6	protein_coding	olfactory receptor 214
chr6	116531242	116531867	+	116531434	116531867	A5SS	0.33	50	50	ENSMUST00000217313.2	ENSMUSG00000051046.8	Olfr214	chr6	protein_coding	olfactory receptor 214
chr6	116531447	116531867	+	116531434	116531867	A5SS	0.33	50	50	ENSMUST00000217313.2	ENSMUSG00000051046.8	Olfr214	chr6	protein_coding	olfactory receptor 214
chr6	116531447	116531867	+	116531242	116531867	A5SS	0.33	50	50	ENSMUST00000214699.2	ENSMUSG00000051046.8	Olfr214	chr6	protein_coding	olfactory receptor 214
chr6	116604094	116605370	-	116604094	116605892	A5SS	0.33	50	50	ENSMUST00000079749.6	ENSMUSG00000059878.13	Zfp422	chr6	protein_coding	zinc finger protein 422
chr6	116604094	116605739	-	116604094	116605892	A5SS	0.33	50	50	ENSMUST00000079749.6	ENSMUSG00000059878.13	Zfp422	chr6	protein_coding	zinc finger protein 422
chr6	116604094	116605739	-	116604094	116605370	5pMXE	0.33	50	50	ENSMUST00000112880.8	ENSMUSG00000059878.13	Zfp422	chr6	protein_coding	zinc finger protein 422
chr6	116617315	116617834	-	116617315	116618389	A5SS	0.5	50	50	ENSMUST00000035842.7	ENSMUSG00000042129.9	Rassf4	chr6	protein_coding	Ras association (RalGDS/AF-6) domain family member 4
chr6	116636556	116638816	-	116636556	116638800	A5SS	0.5	50	50	ENSMUST00000204203.2	ENSMUSG00000042129.9	Rassf4	chr6	protein_coding	Ras association (RalGDS/AF-6) domain family member 4
chr6	116627806	116628635	+	116627806	116628654	A3SS	0.33	50	50	ENSMUST00000067354.10	ENSMUSG00000048489.13	Depp1	chr6	protein_coding	DEPP1 autophagy regulator
chr6	116627806	116628657	+	116627806	116628654	A3SS	0.33	50	50	ENSMUST00000067354.10	ENSMUSG00000048489.13	Depp1	chr6	protein_coding	DEPP1 autophagy regulator
chr6	116627806	116628635	+	116627806	116628657	A3SS	0.33	50	50	ENSMUST00000178241.4	ENSMUSG00000048489.13	Depp1	chr6	protein_coding	DEPP1 autophagy regulator
chr6	116675353;116678827	116678803;116678938	-	116675353	116678938	cassetteExon	0.5	100	100	ENSMUST00000056623.13	ENSMUSG00000048108.14	Tmem72	chr6	protein_coding	transmembrane protein 72
chr6	117150539	117153047	+	117150539	117155544	A3SS	0.5	50	50	ENSMUST00000112871.8	ENSMUSG00000061353.12	Cxcl12	chr6	protein_coding	chemokine (C-X-C motif) ligand 12
chr6	117539948	117548076	+	117539948	117544495	3pMXE	0.5	50	50	ENSMUST00000008011.8	ENSMUSG00000054488.15	Gm9946	chr6	lncRNA	predicted gene 9946
chr6	117656304	117679583	-	117624724	117679583	A3SS	0.5	50	50	ENSMUST00000188781.7	ENSMUSG00000099869.7	1700030F04Rik	chr6	lncRNA	RIKEN cDNA 1700030F04 gene
chr6	117679684	117694177	-	117679684	117727971	A5SS	0.5	50	50	ENSMUST00000188781.7	ENSMUSG00000099869.7	1700030F04Rik	chr6	lncRNA	RIKEN cDNA 1700030F04 gene
chr6	117818229;117819075	117818969;117820214	+	117818229	117820214	cassetteExon	0.5	100	100	ENSMUST00000127593.8	ENSMUSG00000059689.16	Zfp637	chr6	protein_coding	zinc finger protein 637
chr6	117818242	117820214	+	117818229	117820214	A5SS	0.25	50	50	ENSMUST00000127593.8	ENSMUSG00000059689.16	Zfp637	chr6	protein_coding	zinc finger protein 637
chr6	117818358	117820214	+	117818229	117820214	A5SS	0.25	50	50	ENSMUST00000127593.8	ENSMUSG00000059689.16	Zfp637	chr6	protein_coding	zinc finger protein 637
chr6	117820353	117821986	+	117820357	117821986	A5SS	0.33	50	50	ENSMUST00000112859.8	ENSMUSG00000059689.16	Zfp637	chr6	protein_coding	zinc finger protein 637
chr6	117820567	117821986	+	117820357	117821986	A5SS	0.33	50	50	ENSMUST00000112859.8	ENSMUSG00000059689.16	Zfp637	chr6	protein_coding	zinc finger protein 637
chr6	117820353	117821986	+	117820353	117821944	A3SS	0.5	50	50	ENSMUST00000137224.8	ENSMUSG00000059689.16	Zfp637	chr6	protein_coding	zinc finger protein 637
chr6	117820567	117821986	+	117820353	117821986	A5SS	0.33	50	50	ENSMUST00000164472.8	ENSMUSG00000059689.16	Zfp637	chr6	protein_coding	zinc finger protein 637
chr6	117818242	117820214	+	117819075	117820214	A5SS&ES	0.25	50	50	ENSMUST00000112861.8	ENSMUSG00000059689.16	Zfp637	chr6	protein_coding	zinc finger protein 637
chr6	117818358	117820214	+	117819075	117820214	A5SS&ES	0.25	50	50	ENSMUST00000112861.8	ENSMUSG00000059689.16	Zfp637	chr6	protein_coding	zinc finger protein 637
chr6	117818242	117820214	+	117818358	117820214	A5SS	0.25	50	50	ENSMUST00000136889.8	ENSMUSG00000059689.16	Zfp637	chr6	protein_coding	zinc finger protein 637
chr6	117840103	117847217	+	117839253	117847217	A5SS	0.33	50	50	ENSMUST00000136316.2	ENSMUSG00000042097.18	Zfp239	chr6	protein_coding	zinc finger protein 239
chr6	117846234	117847217	+	117839253	117847217	A5SS	0.33	50	50	ENSMUST00000136316.2	ENSMUSG00000042097.18	Zfp239	chr6	protein_coding	zinc finger protein 239
chr6	117840103	117846179	+	117840103;117843535	117843356;117846179	ES	0.33	50	50	ENSMUST00000134619.8	ENSMUSG00000042097.18	Zfp239	chr6	protein_coding	zinc finger protein 239
chr6	117843535	117843782	+	117843535	117846179	A3SS	0.5	50	50	ENSMUST00000134619.8	ENSMUSG00000042097.18	Zfp239	chr6	protein_coding	zinc finger protein 239
chr6	117844285	117846179	+	117843535	117846179	A5SS	0.33	50	50	ENSMUST00000134619.8	ENSMUSG00000042097.18	Zfp239	chr6	protein_coding	zinc finger protein 239
chr6	117840103	117847217	+	117840103;117846234	117846179;117847217	ES	0.5	50	50	ENSMUST00000079405.15	ENSMUSG00000042097.18	Zfp239	chr6	protein_coding	zinc finger protein 239
chr6	117844285	117846179	+	117840103	117846179	A5SS	0.33	50	50	ENSMUST00000079405.15	ENSMUSG00000042097.18	Zfp239	chr6	protein_coding	zinc finger protein 239
chr6	117840103	117843356	+	117840103	117847217	A3SS	0.33	50	50	ENSMUST00000112857.3	ENSMUSG00000042097.18	Zfp239	chr6	protein_coding	zinc finger protein 239
chr6	117894559	117900669	+	117894559;117896120	117896060;117900669	ES	0.33	50	50	ENSMUST00000177743.8	ENSMUSG00000042079.14	Hnrnpf	chr6	protein_coding	heterogeneous nuclear ribonucleoprotein F
chr6	117896120;117896326	117896252;117900669	+	117896120	117900669	cassetteExon	0.5	100	100	ENSMUST00000177743.8	ENSMUSG00000042079.14	Hnrnpf	chr6	protein_coding	heterogeneous nuclear ribonucleoprotein F
chr6	117883800	117894431	+	117877467	117894431	A5SS	0.25	50	50	ENSMUST00000177743.8	ENSMUSG00000042079.14	Hnrnpf	chr6	protein_coding	heterogeneous nuclear ribonucleoprotein F
chr6	117884169	117894431	+	117877467	117894431	A5SS	0.25	50	50	ENSMUST00000177743.8	ENSMUSG00000042079.14	Hnrnpf	chr6	protein_coding	heterogeneous nuclear ribonucleoprotein F
chr6	117894032	117894431	+	117877467	117894431	A5SS	0.25	50	50	ENSMUST00000177743.8	ENSMUSG00000042079.14	Hnrnpf	chr6	protein_coding	heterogeneous nuclear ribonucleoprotein F
chr6	117883800	117894431	+	117883800;117884169	117884110;117894431	ES	0.33	50	50	ENSMUST00000179224.8	ENSMUSG00000042079.14	Hnrnpf	chr6	protein_coding	heterogeneous nuclear ribonucleoprotein F
chr6	117894032	117894431	+	117884169	117894431	A5SS	0.33	50	50	ENSMUST00000179224.8	ENSMUSG00000042079.14	Hnrnpf	chr6	protein_coding	heterogeneous nuclear ribonucleoprotein F
chr6	117894032	117894431	+	117883800	117894431	A5SS	0.25	50	50	ENSMUST00000035493.14	ENSMUSG00000042079.14	Hnrnpf	chr6	protein_coding	heterogeneous nuclear ribonucleoprotein F
chr6	117883800	117894431	+	117884169	117894431	5pMXE	0.25	50	50	ENSMUST00000163168.9	ENSMUSG00000042079.14	Hnrnpf	chr6	protein_coding	heterogeneous nuclear ribonucleoprotein F
chr6	117894559;117896326	117896060;117900669	+	117894559	117900669	cassetteExon	0.5	100	100	ENSMUST00000163168.9	ENSMUSG00000042079.14	Hnrnpf	chr6	protein_coding	heterogeneous nuclear ribonucleoprotein F
chr6	117910678	117910805	-	117910709	117910805	A3SS	0.5	50	50	ENSMUST00000203082.3	ENSMUSG00000004988.10	Fxyd4	chr6	protein_coding	FXYD domain-containing ion transport regulator 4
chr6	117911345	117911387	-	117911312	117911387	A3SS	0.5	50	50	ENSMUST00000203082.3	ENSMUSG00000004988.10	Fxyd4	chr6	protein_coding	FXYD domain-containing ion transport regulator 4
chr6	117912880	117913699	-	117912883	117913699	A3SS	0.33	50	50	ENSMUST00000203082.3	ENSMUSG00000004988.10	Fxyd4	chr6	protein_coding	FXYD domain-containing ion transport regulator 4
chr6	117912967	117913699	-	117912883	117913699	A3SS	0.33	50	50	ENSMUST00000203082.3	ENSMUSG00000004988.10	Fxyd4	chr6	protein_coding	FXYD domain-containing ion transport regulator 4
chr6	117912967	117913699	-	117912880	117913699	A3SS	0.33	50	50	ENSMUST00000204214.3	ENSMUSG00000004988.10	Fxyd4	chr6	protein_coding	FXYD domain-containing ion transport regulator 4
chr6	118061519	118062198	+	118061519	118062225	A3SS	0.5	50	50	ENSMUST00000164960.4	ENSMUSG00000030134.12	Rasgef1a	chr6	protein_coding	RasGEF domain family, member 1A
chr6	118043423	118057319	+	117988524	118057319	A5SS	0.5	50	50	ENSMUST00000164960.4	ENSMUSG00000030134.12	Rasgef1a	chr6	protein_coding	RasGEF domain family, member 1A
chr6	118394539	118395370	-	118390880	118395370	A3SS	0.5	50	50	ENSMUST00000203444.2	ENSMUSG00000030138.9	Bms1	chr6	protein_coding	BMS1, ribosome biogenesis factor
chr6	118390880	118393424	-	118390880	118395370	A5SS	0.5	50	50	ENSMUST00000203444.2	ENSMUSG00000030138.9	Bms1	chr6	protein_coding	BMS1, ribosome biogenesis factor
chr6	118410392	118431638	-	118410392;118430848	118430807;118431638	ES	0.33	50	50	ENSMUST00000069292.14	ENSMUSG00000030145.15	Zfp248	chr6	protein_coding	zinc finger protein 248
chr6	118410392;118428323	118428275;118430807	-	118410392	118430807	cassetteExon	0.5	100	100	ENSMUST00000069292.14	ENSMUSG00000030145.15	Zfp248	chr6	protein_coding	zinc finger protein 248
chr6	118430848;118431302	118431247;118431638	-	118430848	118431638	cassetteExon	0.5	100	100	ENSMUST00000069292.14	ENSMUSG00000030145.15	Zfp248	chr6	protein_coding	zinc finger protein 248
chr6	118430566	118430807	-	118410392	118430807	A3SS	0.33	50	50	ENSMUST00000069292.14	ENSMUSG00000030145.15	Zfp248	chr6	protein_coding	zinc finger protein 248
chr6	118410392;118431302	118430807;118431638	-	118410392	118431638	cassetteExon	0.5	100	100	ENSMUST00000161519.8	ENSMUSG00000030145.15	Zfp248	chr6	protein_coding	zinc finger protein 248
chr6	118410392	118428275	-	118410392	118431638	A5SS	0.33	50	50	ENSMUST00000161519.8	ENSMUSG00000030145.15	Zfp248	chr6	protein_coding	zinc finger protein 248
chr6	118430566	118430807	-	118428323	118430807	A3SS	0.33	50	50	ENSMUST00000162275.8	ENSMUSG00000030145.15	Zfp248	chr6	protein_coding	zinc finger protein 248
chr6	118410392	118431638	-	118430848	118431638	3pMXE	0.33	50	50	ENSMUST00000189168.2	ENSMUSG00000030145.15	Zfp248	chr6	protein_coding	zinc finger protein 248
chr6	118604531	118615388	-	118604531;118607392	118607360;118615388	ES	0.33	50	50	ENSMUST00000186889.7	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	118647417	118652781	-	118647417;118651366	118651307;118652781	ES	0.33	50	50	ENSMUST00000186889.7	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	118604531;118614774	118614691;118615388	-	118604531;118607392	118607360;118615388	MXE	0.5	100	100	ENSMUST00000186889.7	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	118607392;118614774	118614691;118615388	-	118607392	118615388	cassetteExon	0.5	100	100	ENSMUST00000186889.7	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	118604531;118614774	118614691;118628909	-	118604531;118615471	118607360;118628909	MXE	0.5	100	100	ENSMUST00000186889.7	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	118607392;118614774	118614691;118628909	-	118607392;118615471	118615388;118628909	MXE	0.5	100	100	ENSMUST00000186889.7	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	118647417;118651575	118651516;118652781	-	118647417;118651366	118651307;118652781	MXE	0.5	100	100	ENSMUST00000186889.7	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	118651366;118651575	118651516;118652781	-	118651366	118652781	cassetteExon	0.5	100	100	ENSMUST00000186889.7	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	118690308;118692938	118692864;118711812	-	118690308	118711812	cassetteExon	0.5	100	100	ENSMUST00000186889.7	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	118711984;118718935	118718832;118728330	-	118711984;118719329	118719226;118728330	MXE	0.5	100	100	ENSMUST00000186889.7	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	118923332	119029562	-	118757285	119029562	A3SS	0.33	50	50	ENSMUST00000186889.7	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	118932733	119029562	-	118757285	119029562	A3SS	0.33	50	50	ENSMUST00000186889.7	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	118571155	118571905	-	118571155	118572817	A5SS	0.5	50	50	ENSMUST00000186889.7	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	118604531	118607186	-	118604531	118607360	A5SS	0.25	50	50	ENSMUST00000186889.7	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	118734487	118734577	-	118734487	118753378	A5SS	0.5	50	50	ENSMUST00000186889.7	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	119034476	119056602	-	119034476	119173054	A5SS	0.33	50	50	ENSMUST00000186889.7	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	119034476	119084888	-	119034476	119173054	A5SS	0.33	50	50	ENSMUST00000186889.7	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	118604531;118607392	118607186;118615388	-	118604531	118615388	cassetteExon	0.5	100	100	ENSMUST00000188181.7	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	118604531;118614774	118614691;118615388	-	118604531	118615388	cassetteExon	0.5	100	100	ENSMUST00000188181.7	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	118604531;118614774	118614691;118628909	-	118604531;118615471	118615388;118628909	MXE	0.5	100	100	ENSMUST00000188181.7	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	118647417;118651575	118651307;118652781	-	118647417	118652781	cassetteExon	0.5	100	100	ENSMUST00000188181.7	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	118647417;118651575	118651516;118652781	-	118647417	118652781	cassetteExon	0.5	100	100	ENSMUST00000188181.7	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	118647417;118651366	118651307;118651516	-	118647417	118651516	cassetteExon	0.5	100	100	ENSMUST00000219833.2	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	118604531	118614691	-	118604531;118607392	118607186;118614691	ES	0.5	50	50	ENSMUST00000220022.2	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	118604531;118615471	118615388;118628909	-	118604531;118614774	118607186;118628909	MXE	0.5	100	100	ENSMUST00000220022.2	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	118614774;118615471	118615388;118628909	-	118614774	118628909	cassetteExon	0.5	100	100	ENSMUST00000220022.2	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	118604531;118607392	118607360;118614691	-	118604531	118614691	cassetteExon	0.5	100	100	ENSMUST00000219223.2	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	119034476	119056602	-	119034476	119084888	A5SS	0.33	50	50	ENSMUST00000078320.14	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	118604531;118615471	118615388;118628909	-	118604531;118614774	118607360;118628909	MXE	0.5	100	100	ENSMUST00000112790.9	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	118604531;118607392	118607186;118615388	-	118604531;118614774	118614691;118615388	MXE	0.5	100	100	ENSMUST00000189520.7	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	118932733	119029562	-	118923332	119029562	A3SS	0.33	50	50	ENSMUST00000189057.2	ENSMUSG00000051331.17	Cacna1c	chr6	protein_coding	calcium channel, voltage-dependent, L type, alpha 1C subunit
chr6	119192567	119194863	+	119192567	119194764	A3SS	0.5	50	50	ENSMUST00000112777.9	ENSMUSG00000041477.15	Dcp1b	chr6	protein_coding	decapping mRNA 1B
chr6	119169785	119175889	+	119160738	119175889	A5SS	0.5	50	50	ENSMUST00000112777.9	ENSMUSG00000041477.15	Dcp1b	chr6	protein_coding	decapping mRNA 1B
chr6	119254861	119258581	+	119254861;119255224	119255150;119258581	ES	0.5	50	50	ENSMUST00000238905.2	ENSMUSG00000041460.17	Cacna2d4	chr6	protein_coding	calcium channel, voltage-dependent, alpha 2/delta subunit 4
chr6	119322057	119324095	+	119322057;119322411	119322391;119324095	ES	0.5	50	50	ENSMUST00000238905.2	ENSMUSG00000041460.17	Cacna2d4	chr6	protein_coding	calcium channel, voltage-dependent, alpha 2/delta subunit 4
chr6	119225958	119244768	+	119221291	119244768	A5SS	0.33	50	50	ENSMUST00000238905.2	ENSMUSG00000041460.17	Cacna2d4	chr6	protein_coding	calcium channel, voltage-dependent, alpha 2/delta subunit 4
chr6	119244599	119244768	+	119221291	119244768	A5SS	0.33	50	50	ENSMUST00000238905.2	ENSMUSG00000041460.17	Cacna2d4	chr6	protein_coding	calcium channel, voltage-dependent, alpha 2/delta subunit 4
chr6	119307860	119313352	+	119289464	119313352	A5SS	0.33	50	50	ENSMUST00000238905.2	ENSMUSG00000041460.17	Cacna2d4	chr6	protein_coding	calcium channel, voltage-dependent, alpha 2/delta subunit 4
chr6	119309755	119313352	+	119289464	119313352	A5SS	0.33	50	50	ENSMUST00000238905.2	ENSMUSG00000041460.17	Cacna2d4	chr6	protein_coding	calcium channel, voltage-dependent, alpha 2/delta subunit 4
chr6	119244599	119244768	+	119225958	119244768	A5SS	0.33	50	50	ENSMUST00000188239.7	ENSMUSG00000041460.17	Cacna2d4	chr6	protein_coding	calcium channel, voltage-dependent, alpha 2/delta subunit 4
chr6	119309755	119313352	+	119307860	119313352	A5SS	0.33	50	50	ENSMUST00000186702.7	ENSMUSG00000041460.17	Cacna2d4	chr6	protein_coding	calcium channel, voltage-dependent, alpha 2/delta subunit 4
chr6	119301369	119307456	-	119301369	119306065	5pMXE	0.5	50	50	ENSMUST00000168793.8	ENSMUSG00000055003.15	Lrtm2	chr6	protein_coding	leucine-rich repeats and transmembrane domains 2
chr6	119338960;119340508	119340449;119342222	-	119338960	119342222	cassetteExon	0.5	100	100	ENSMUST00000032272.13	ENSMUSG00000030168.14	Adipor2	chr6	protein_coding	adiponectin receptor 2
chr6	119378983	119394381	-	119347369	119394381	A3SS	0.5	50	50	ENSMUST00000032272.13	ENSMUSG00000030168.14	Adipor2	chr6	protein_coding	adiponectin receptor 2
chr6	119347369	119365443	-	119347369	119394381	A5SS	0.25	50	50	ENSMUST00000032272.13	ENSMUSG00000030168.14	Adipor2	chr6	protein_coding	adiponectin receptor 2
chr6	119347369	119367181	-	119347369	119394381	A5SS	0.25	50	50	ENSMUST00000032272.13	ENSMUSG00000030168.14	Adipor2	chr6	protein_coding	adiponectin receptor 2
chr6	119347369	119377684	-	119347369	119394381	A5SS	0.25	50	50	ENSMUST00000032272.13	ENSMUSG00000030168.14	Adipor2	chr6	protein_coding	adiponectin receptor 2
chr6	119347369	119367181	-	119347369	119365443	5pMXE	0.25	50	50	ENSMUST00000169744.8	ENSMUSG00000030168.14	Adipor2	chr6	protein_coding	adiponectin receptor 2
chr6	119347369	119377684	-	119347369	119365443	5pMXE	0.25	50	50	ENSMUST00000169744.8	ENSMUSG00000030168.14	Adipor2	chr6	protein_coding	adiponectin receptor 2
chr6	119347369	119377684	-	119347369	119367181	5pMXE	0.25	50	50	ENSMUST00000187699.7	ENSMUSG00000030168.14	Adipor2	chr6	protein_coding	adiponectin receptor 2
chr6	119425233	119444060	-	119425233	119426178	5pMXE	0.33	50	50	ENSMUST00000117171.8	ENSMUSG00000030170.15	Wnt5b	chr6	protein_coding	wingless-type MMTV integration site family, member 5B
chr6	119425233	119520942	-	119425233	119426178	5pMXE	0.33	50	50	ENSMUST00000117171.8	ENSMUSG00000030170.15	Wnt5b	chr6	protein_coding	wingless-type MMTV integration site family, member 5B
chr6	119425233	119444060	-	119425233	119520942	A5SS	0.33	50	50	ENSMUST00000178696.8	ENSMUSG00000030170.15	Wnt5b	chr6	protein_coding	wingless-type MMTV integration site family, member 5B
chr6	119671692	119699134	-	119671692;119690772	119690641;119699134	ES	0.33	50	50	ENSMUST00000183703.8	ENSMUSG00000030172.16	Erc1	chr6	protein_coding	ELKS/RAB6-interacting/CAST family member 1
chr6	119699269	119720249	-	119699269;119711053	119711042;119720249	ES	0.5	50	50	ENSMUST00000183703.8	ENSMUSG00000030172.16	Erc1	chr6	protein_coding	ELKS/RAB6-interacting/CAST family member 1
chr6	119750862	119756438	-	119750862;119755032	119754949;119756438	ES	0.5	50	50	ENSMUST00000183703.8	ENSMUSG00000030172.16	Erc1	chr6	protein_coding	ELKS/RAB6-interacting/CAST family member 1
chr6	119802170	119824838	-	119802170;119802780	119802642;119824838	ES	0.33	50	50	ENSMUST00000183703.8	ENSMUSG00000030172.16	Erc1	chr6	protein_coding	ELKS/RAB6-interacting/CAST family member 1
chr6	119571934;119595873	119595807;119597272	-	119571934	119597272	cassetteExon	0.5	100	100	ENSMUST00000183703.8	ENSMUSG00000030172.16	Erc1	chr6	protein_coding	ELKS/RAB6-interacting/CAST family member 1
chr6	119698442	119699134	-	119690772	119699134	A3SS	0.33	50	50	ENSMUST00000183703.8	ENSMUSG00000030172.16	Erc1	chr6	protein_coding	ELKS/RAB6-interacting/CAST family member 1
chr6	119801580	119824838	-	119802780	119824838	A3SS&ES	0.33	50	50	ENSMUST00000183703.8	ENSMUSG00000030172.16	Erc1	chr6	protein_coding	ELKS/RAB6-interacting/CAST family member 1
chr6	119750862	119754940	-	119750862	119754949	A5SS	0.33	50	50	ENSMUST00000183703.8	ENSMUSG00000030172.16	Erc1	chr6	protein_coding	ELKS/RAB6-interacting/CAST family member 1
chr6	119802170	119824996	-	119802170	119802642	A5SS&ES	0.33	50	50	ENSMUST00000183703.8	ENSMUSG00000030172.16	Erc1	chr6	protein_coding	ELKS/RAB6-interacting/CAST family member 1
chr6	119750862;119755032	119754940;119756438	-	119750862	119756438	cassetteExon	0.5	100	100	ENSMUST00000185139.8	ENSMUSG00000030172.16	Erc1	chr6	protein_coding	ELKS/RAB6-interacting/CAST family member 1
chr6	119801580	119824838	-	119802170	119824838	A3SS	0.33	50	50	ENSMUST00000185139.8	ENSMUSG00000030172.16	Erc1	chr6	protein_coding	ELKS/RAB6-interacting/CAST family member 1
chr6	119802170	119824996	-	119802170	119824838	A5SS	0.33	50	50	ENSMUST00000185139.8	ENSMUSG00000030172.16	Erc1	chr6	protein_coding	ELKS/RAB6-interacting/CAST family member 1
chr6	119698442	119699134	-	119671692	119699134	A3SS	0.33	50	50	ENSMUST00000183880.8	ENSMUSG00000030172.16	Erc1	chr6	protein_coding	ELKS/RAB6-interacting/CAST family member 1
chr6	119774284	119801347	-	119738272	119801347	A3SS	0.5	50	50	ENSMUST00000185143.2	ENSMUSG00000030172.16	Erc1	chr6	protein_coding	ELKS/RAB6-interacting/CAST family member 1
chr6	119738272	119750695	-	119738272	119801347	A5SS	0.5	50	50	ENSMUST00000185143.2	ENSMUSG00000030172.16	Erc1	chr6	protein_coding	ELKS/RAB6-interacting/CAST family member 1
chr6	119891198	119895548	+	119891198	119892195	3pMXE	0.5	50	50	ENSMUST00000162205.8	ENSMUSG00000030166.15	Rad52	chr6	protein_coding	RAD52 homolog, DNA repair protein
chr6	119879796;119888102	119888009;119889963	+	119879796	119889963	cassetteExon	0.5	100	100	ENSMUST00000162205.8	ENSMUSG00000030166.15	Rad52	chr6	protein_coding	RAD52 homolog, DNA repair protein
chr6	119890064;119890953	119890860;119891131	+	119890064	119891131	cassetteExon	0.5	100	100	ENSMUST00000162205.8	ENSMUSG00000030166.15	Rad52	chr6	protein_coding	RAD52 homolog, DNA repair protein
chr6	119888102	119889784	+	119888102	119889963	A3SS	0.33	50	50	ENSMUST00000162461.7	ENSMUSG00000030166.15	Rad52	chr6	protein_coding	RAD52 homolog, DNA repair protein
chr6	119897989	119899436	+	119897989	119899433	A3SS	0.5	50	50	ENSMUST00000162461.7	ENSMUSG00000030166.15	Rad52	chr6	protein_coding	RAD52 homolog, DNA repair protein
chr6	119888102	119892928	+	119888102	119889784	3pMXE	0.33	50	50	ENSMUST00000159356.8	ENSMUSG00000030166.15	Rad52	chr6	protein_coding	RAD52 homolog, DNA repair protein
chr6	119879796	119889963	+	119879796	119888009	A3SS&ES	0.5	50	50	ENSMUST00000159356.8	ENSMUSG00000030166.15	Rad52	chr6	protein_coding	RAD52 homolog, DNA repair protein
chr6	119888102	119892928	+	119888102	119889963	3pMXE	0.33	50	50	ENSMUST00000160877.8	ENSMUSG00000030166.15	Rad52	chr6	protein_coding	RAD52 homolog, DNA repair protein
chr6	119879796	119892928	+	119879796;119888102	119888009;119892928	ES	0.33	50	50	ENSMUST00000159291.8	ENSMUSG00000030166.15	Rad52	chr6	protein_coding	RAD52 homolog, DNA repair protein
chr6	119891198	119895548	+	119893003	119895548	A5SS&ES	0.33	50	50	ENSMUST00000159291.8	ENSMUSG00000030166.15	Rad52	chr6	protein_coding	RAD52 homolog, DNA repair protein
chr6	119892313	119892928	+	119888102	119892928	A5SS	0.33	50	50	ENSMUST00000159291.8	ENSMUSG00000030166.15	Rad52	chr6	protein_coding	RAD52 homolog, DNA repair protein
chr6	119879796	119895548	+	119879796;119893003	119892928;119895548	ES	0.33	50	50	ENSMUST00000162255.8	ENSMUSG00000030166.15	Rad52	chr6	protein_coding	RAD52 homolog, DNA repair protein
chr6	119879796	119889963	+	119879796	119892928	A3SS	0.25	50	50	ENSMUST00000162255.8	ENSMUSG00000030166.15	Rad52	chr6	protein_coding	RAD52 homolog, DNA repair protein
chr6	119892313	119892928	+	119879796	119892928	A5SS	0.33	50	50	ENSMUST00000162255.8	ENSMUSG00000030166.15	Rad52	chr6	protein_coding	RAD52 homolog, DNA repair protein
chr6	119879796	119888009	+	119879796	119895548	A3SS	0.25	50	50	ENSMUST00000162590.2	ENSMUSG00000030166.15	Rad52	chr6	protein_coding	RAD52 homolog, DNA repair protein
chr6	119879796	119889963	+	119879796	119895548	A3SS	0.25	50	50	ENSMUST00000162590.2	ENSMUSG00000030166.15	Rad52	chr6	protein_coding	RAD52 homolog, DNA repair protein
chr6	119891198	119895548	+	119879796	119895548	A5SS	0.33	50	50	ENSMUST00000162590.2	ENSMUSG00000030166.15	Rad52	chr6	protein_coding	RAD52 homolog, DNA repair protein
chr6	119890064	119891131	+	119890953	119891131	5pMXE	0.5	50	50	ENSMUST00000161860.2	ENSMUSG00000030166.15	Rad52	chr6	protein_coding	RAD52 homolog, DNA repair protein
chr6	119920827	119923198	-	119920827;119921745	119921662;119923198	ES	0.33	50	50	ENSMUST00000060043.13	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	119929930	119933032	-	119929930;119931193	119930732;119933032	ES	0.25	50	50	ENSMUST00000060043.13	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	119949817	119969301	-	119949817;119967210	119967053;119969301	ES	0.5	50	50	ENSMUST00000060043.13	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	119904195;119905110	119905084;119911217	-	119904195	119911217	cassetteExon	0.5	100	100	ENSMUST00000060043.13	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	119904195;119906828	119906787;119911217	-	119904195	119911217	cassetteExon	0.5	100	100	ENSMUST00000060043.13	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	119949817;119953395	119953267;119967053	-	119949817	119967053	cassetteExon	0.5	100	100	ENSMUST00000060043.13	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	119909722	119911217	-	119904195	119911217	A3SS	0.25	50	50	ENSMUST00000060043.13	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	119921761	119923198	-	119921745	119923198	A3SS	0.33	50	50	ENSMUST00000060043.13	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	119930863	119933032	-	119931193	119933032	A3SS	0.25	50	50	ENSMUST00000060043.13	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	119940593	119945437	-	119937685	119945437	A3SS	0.33	50	50	ENSMUST00000060043.13	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	119942883	119945437	-	119937685	119945437	A3SS	0.33	50	50	ENSMUST00000060043.13	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	119937685	119939358	-	119937685	119945437	A5SS	0.5	50	50	ENSMUST00000060043.13	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	119949817	119958079	-	119949817	119967053	A5SS	0.25	50	50	ENSMUST00000060043.13	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	119940593	119945437	-	119940593;119942883	119942626;119945437	ES	0.33	50	50	ENSMUST00000177761.8	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	119928956;119929930	119929646;119933032	-	119928956	119933032	cassetteExon	0.5	100	100	ENSMUST00000177761.8	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	119930863	119933032	-	119928956	119933032	A3SS	0.25	50	50	ENSMUST00000177761.8	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	119931193	119933032	-	119928956	119933032	A3SS	0.25	50	50	ENSMUST00000177761.8	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	119937685	119945437	-	119937685;119940593	119939358;119945437	ES	0.33	50	50	ENSMUST00000088644.13	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	119929930;119930863	119930732;119933032	-	119929930	119933032	cassetteExon	0.5	100	100	ENSMUST00000088644.13	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	119920827;119921761	119921662;119923198	-	119920827	119923198	cassetteExon	0.5	100	100	ENSMUST00000088646.12	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	119904195;119906828	119906787;119911217	-	119904195;119905110	119905084;119911217	MXE	0.5	100	100	ENSMUST00000160493.8	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	119909722	119911217	-	119905110	119911217	A3SS	0.25	50	50	ENSMUST00000160493.8	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	119906828;119909722	119909630;119911217	-	119906828	119911217	cassetteExon	0.5	100	100	ENSMUST00000161243.2	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	119906828;119909722	119909651;119911217	-	119906828	119911217	cassetteExon	0.5	100	100	ENSMUST00000161243.2	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	119906828	119909651	-	119906828	119909630	A5SS	0.33	50	50	ENSMUST00000162190.8	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	119928956	119933032	-	119929930	119933032	3pMXE	0.25	50	50	ENSMUST00000161048.8	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	119949817	119969301	-	119949817	119967053	5pMXE	0.25	50	50	ENSMUST00000161048.8	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	119949817	119958079	-	119949817	119953267	A5SS&ES	0.33	50	50	ENSMUST00000160769.8	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	119949817	119953267	-	119949817	119969301	A5SS	0.25	50	50	ENSMUST00000161392.8	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	119949817	119958079	-	119949817	119969301	A5SS	0.25	50	50	ENSMUST00000161392.8	ENSMUSG00000045962.17	Wnk1	chr6	protein_coding	WNK lysine deficient protein kinase 1
chr6	120170867	120174864	+	120070419	120174864	A5SS	0.5	50	50	ENSMUST00000112711.9	ENSMUSG00000041377.13	Ninj2	chr6	protein_coding	ninjurin 2
chr6	120209952	120271352	-	120209952	120219524	5pMXE	0.5	50	50	ENSMUST00000125341.2	ENSMUSG00000041372.11	B4galnt3	chr6	protein_coding	beta-1,4-N-acetyl-galactosaminyl transferase 3
chr6	120192461	120193235	-	120192464	120193235	A3SS	0.5	50	50	ENSMUST00000125341.2	ENSMUSG00000041372.11	B4galnt3	chr6	protein_coding	beta-1,4-N-acetyl-galactosaminyl transferase 3
chr6	120306420	120311730	-	120306420;120308992	120308773;120311730	ES	0.5	50	50	ENSMUST00000032283.12	ENSMUSG00000030177.15	Ccdc77	chr6	protein_coding	coiled-coil domain containing 77
chr6	120315121	120318934	-	120315121;120316159	120316096;120318934	ES	0.33	50	50	ENSMUST00000032283.12	ENSMUSG00000030177.15	Ccdc77	chr6	protein_coding	coiled-coil domain containing 77
chr6	120331015	120341035	-	120331015	120334288	5pMXE	0.33	50	50	ENSMUST00000032283.12	ENSMUSG00000030177.15	Ccdc77	chr6	protein_coding	coiled-coil domain containing 77
chr6	120331015	120341047	-	120331015	120334288	5pMXE	0.33	50	50	ENSMUST00000032283.12	ENSMUSG00000030177.15	Ccdc77	chr6	protein_coding	coiled-coil domain containing 77
chr6	120319038	120325349	-	120319030	120325349	A3SS	0.5	50	50	ENSMUST00000032283.12	ENSMUSG00000030177.15	Ccdc77	chr6	protein_coding	coiled-coil domain containing 77
chr6	120327351	120330962	-	120327405	120330962	A3SS	0.5	50	50	ENSMUST00000032283.12	ENSMUSG00000030177.15	Ccdc77	chr6	protein_coding	coiled-coil domain containing 77
chr6	120311878	120318934	-	120311878;120315121	120315030;120318934	ES	0.33	50	50	ENSMUST00000127146.8	ENSMUSG00000030177.15	Ccdc77	chr6	protein_coding	coiled-coil domain containing 77
chr6	120331015	120341035	-	120331015	120341047	A5SS	0.33	50	50	ENSMUST00000127146.8	ENSMUSG00000030177.15	Ccdc77	chr6	protein_coding	coiled-coil domain containing 77
chr6	120306420	120311730	-	120308992	120311730	3pMXE	0.5	50	50	ENSMUST00000144131.8	ENSMUSG00000030177.15	Ccdc77	chr6	protein_coding	coiled-coil domain containing 77
chr6	120316159	120318934	-	120311878	120318934	A3SS	0.33	50	50	ENSMUST00000163827.8	ENSMUSG00000030177.15	Ccdc77	chr6	protein_coding	coiled-coil domain containing 77
chr6	120351948	120359878	+	120351948;120358630	120358496;120359878	ES	0.5	50	50	ENSMUST00000135802.8	ENSMUSG00000030180.16	Kdm5a	chr6	protein_coding	lysine (K)-specific demethylase 5A
chr6	120383686;120385320	120385206;120389116	+	120383686	120389116	cassetteExon	0.5	100	100	ENSMUST00000135802.8	ENSMUSG00000030180.16	Kdm5a	chr6	protein_coding	lysine (K)-specific demethylase 5A
chr6	120376043	120379467	+	120376018	120379467	A5SS	0.5	50	50	ENSMUST00000135802.8	ENSMUSG00000030180.16	Kdm5a	chr6	protein_coding	lysine (K)-specific demethylase 5A
chr6	120409184;120415486	120415405;120415948	+	120409184	120415948	cassetteExon	0.5	100	100	ENSMUST00000005108.10	ENSMUSG00000030180.16	Kdm5a	chr6	protein_coding	lysine (K)-specific demethylase 5A
chr6	120450591	120450715	+	120450033	120450715	A5SS	0.5	50	50	ENSMUST00000204239.3	ENSMUSG00000002897.6	Il17ra	chr6	protein_coding	interleukin 17 receptor A
chr6	120498267	120508128	-	120498267;120500570	120500367;120508128	ES	0.5	50	50	ENSMUST00000075303.7	ENSMUSG00000058979.8	Hdhd5	chr6	protein_coding	haloacid dehalogenase like hydrolase domain containing 5
chr6	120500570	120507934	-	120500570	120508128	A5SS	0.5	50	50	ENSMUST00000075303.7	ENSMUSG00000058979.8	Hdhd5	chr6	protein_coding	haloacid dehalogenase like hydrolase domain containing 5
chr6	120498267	120508128	-	120498267	120500367	A5SS&ES	0.5	50	50	ENSMUST00000141029.2	ENSMUSG00000058979.8	Hdhd5	chr6	protein_coding	haloacid dehalogenase like hydrolase domain containing 5
chr6	120715286	120727813	+	120715286;120720827	120720744;120727813	ES	0.5	50	50	ENSMUST00000112686.8	ENSMUSG00000071226.12	Cecr2	chr6	protein_coding	CECR2, histone acetyl-lysine reader
chr6	120697923	120701337	+	120697923	120708221	A3SS	0.5	50	50	ENSMUST00000112686.8	ENSMUSG00000071226.12	Cecr2	chr6	protein_coding	CECR2, histone acetyl-lysine reader
chr6	120735592	120738105	+	120735592	120738102	A3SS	0.5	50	50	ENSMUST00000112686.8	ENSMUSG00000071226.12	Cecr2	chr6	protein_coding	CECR2, histone acetyl-lysine reader
chr6	120733898	120734527	+	120733814	120734527	A5SS	0.5	50	50	ENSMUST00000112686.8	ENSMUSG00000071226.12	Cecr2	chr6	protein_coding	CECR2, histone acetyl-lysine reader
chr6	120729730;120731701	120731486;120732478	+	120729730	120732478	cassetteExon	0.5	100	100	ENSMUST00000124634.2	ENSMUSG00000071226.12	Cecr2	chr6	protein_coding	CECR2, histone acetyl-lysine reader
chr6	120785432	120799549	-	120785432;120795360	120795295;120799549	ES	0.5	50	50	ENSMUST00000019354.11	ENSMUSG00000019210.11	Atp6v1e1	chr6	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit E1
chr6	120772725	120781013	-	120772725	120774838	A5SS&ES	0.5	50	50	ENSMUST00000019354.11	ENSMUSG00000019210.11	Atp6v1e1	chr6	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit E1
chr6	120795360	120799228	-	120795360	120799549	A5SS	0.5	50	50	ENSMUST00000019354.11	ENSMUSG00000019210.11	Atp6v1e1	chr6	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit E1
chr6	120785432	120799549	-	120785432	120795295	5pMXE	0.5	50	50	ENSMUST00000203783.3	ENSMUSG00000019210.11	Atp6v1e1	chr6	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit E1
chr6	120825577	120853164	+	120825577	120842529	3pMXE	0.33	50	50	ENSMUST00000203584.3	ENSMUSG00000009112.5	Bcl2l13	chr6	protein_coding	BCL2-like 13 (apoptosis facilitator)
chr6	120825577;120839923	120839816;120842529	+	120825577	120842529	cassetteExon	0.5	100	100	ENSMUST00000203584.3	ENSMUSG00000009112.5	Bcl2l13	chr6	protein_coding	BCL2-like 13 (apoptosis facilitator)
chr6	120825577	120839816	+	120825577	120853164	A3SS	0.33	50	50	ENSMUST00000203037.3	ENSMUSG00000009112.5	Bcl2l13	chr6	protein_coding	BCL2-like 13 (apoptosis facilitator)
chr6	120847796	120853164	+	120825577	120853164	A5SS	0.5	50	50	ENSMUST00000203037.3	ENSMUSG00000009112.5	Bcl2l13	chr6	protein_coding	BCL2-like 13 (apoptosis facilitator)
chr6	120884346	120893695	-	120878749	120893695	A3SS	0.5	50	50	ENSMUST00000160684.8	ENSMUSG00000004446.13	Bid	chr6	protein_coding	BH3 interacting domain death agonist
chr6	120878749	120883390	-	120878749	120893695	A5SS	0.5	50	50	ENSMUST00000160684.8	ENSMUSG00000004446.13	Bid	chr6	protein_coding	BH3 interacting domain death agonist
chr6	120939826	120950364	-	120939826;120946453	120946316;120950364	ES	0.25	50	50	ENSMUST00000098457.9	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	120979836	120985956	-	120979836	120979959	5pMXE	0.5	50	50	ENSMUST00000098457.9	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	120912234;120923564	120923514;120928262	-	120912234	120928262	cassetteExon	0.5	100	100	ENSMUST00000098457.9	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	120929446;120930645	120930595;120934660	-	120929446	120934660	cassetteExon	0.5	100	100	ENSMUST00000098457.9	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	120939826;120943077	120943015;120946316	-	120939826	120946316	cassetteExon	0.5	100	100	ENSMUST00000098457.9	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	120939826;120943077	120943015;120950364	-	120939826;120946453	120946316;120950364	MXE	0.5	100	100	ENSMUST00000098457.9	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	120946453;120948801	120948712;120950364	-	120946453	120950364	cassetteExon	0.5	100	100	ENSMUST00000098457.9	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	120928144	120928262	-	120912234	120928262	A3SS	0.33	50	50	ENSMUST00000098457.9	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	120912234	120912467	-	120912234	120928262	A5SS	0.33	50	50	ENSMUST00000098457.9	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	121019295	121080217	-	121019295	121058370	5pMXE	0.2	50	50	ENSMUST00000207889.2	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	121019295	121081439	-	121019295	121058370	5pMXE	0.2	50	50	ENSMUST00000207889.2	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	121019295	121086977	-	121019295	121058370	5pMXE	0.2	50	50	ENSMUST00000207889.2	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	121019295	121107730	-	121019295	121058370	5pMXE	0.2	50	50	ENSMUST00000207889.2	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	120986142;120996740	120996657;120998144	-	120986142	120998144	cassetteExon	0.5	100	100	ENSMUST00000207889.2	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	120999457;121000061	120999982;121001600	-	120999457	121001600	cassetteExon	0.5	100	100	ENSMUST00000207889.2	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	120984390	120985956	-	120979836	120985956	A3SS	0.5	50	50	ENSMUST00000207889.2	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	120993820	120998144	-	120986142	120998144	A3SS	0.33	50	50	ENSMUST00000207889.2	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	120998314	120999187	-	120998317	120999187	A3SS	0.5	50	50	ENSMUST00000207889.2	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	120986142	120986738	-	120986142	120998144	A5SS	0.33	50	50	ENSMUST00000207889.2	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	121001796	121002114	-	121001796	121003927	A5SS	0.5	50	50	ENSMUST00000207889.2	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	120939826	120950364	-	120939826;120943077	120943015;120950364	ES	0.25	50	50	ENSMUST00000238957.2	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	120943077;120946453	120946316;120950364	-	120943077	120950364	cassetteExon	0.5	100	100	ENSMUST00000238957.2	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	120948801	120950364	-	120943077	120950364	A3SS	0.25	50	50	ENSMUST00000238957.2	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	120928144	120928262	-	120923564	120928262	A3SS	0.33	50	50	ENSMUST00000212333.2	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	120912234	120912467	-	120912234	120923514	A5SS	0.33	50	50	ENSMUST00000212333.2	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	120948801	120950364	-	120939826	120950364	A3SS	0.25	50	50	ENSMUST00000150503.4	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	120993820	120998144	-	120993820;120996740	120996657;120998144	ES	0.33	50	50	ENSMUST00000212208.2	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	120993820	120996657	-	120986142	120996657	A3SS	0.5	50	50	ENSMUST00000205030.2	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	120993820	120998144	-	120996740	120998144	A3SS&ES	0.33	50	50	ENSMUST00000205030.2	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	120986142	120986738	-	120986142	120996657	A5SS	0.33	50	50	ENSMUST00000205030.2	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	121019295	121107730	-	121019295	121086977	5pMXE	0.2	50	50	ENSMUST00000204994.2	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	121019295	121080217	-	121019295	121086977	A5SS	0.2	50	50	ENSMUST00000204994.2	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	121019295	121081439	-	121019295	121086977	A5SS	0.2	50	50	ENSMUST00000204994.2	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	121019295	121080217	-	121019295	121107730	A5SS	0.2	50	50	ENSMUST00000204248.2	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	121019295	121081439	-	121019295	121107730	A5SS	0.2	50	50	ENSMUST00000204248.2	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	121019295	121081439	-	121019295	121080217	5pMXE	0.2	50	50	ENSMUST00000207968.2	ENSMUSG00000051586.18	Mical3	chr6	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr6	121162809;121164525	121164218;121167060	+	121162809	121167060	cassetteExon	0.5	100	100	ENSMUST00000118234.8	ENSMUSG00000067825.12	Pex26	chr6	protein_coding	peroxisomal biogenesis factor 26
chr6	121167206	121170474	+	121167206	121170471	A3SS	0.5	50	50	ENSMUST00000118234.8	ENSMUSG00000067825.12	Pex26	chr6	protein_coding	peroxisomal biogenesis factor 26
chr6	121162809	121167060	+	121162809	121164218	3pMXE	0.5	50	50	ENSMUST00000137432.8	ENSMUSG00000067825.12	Pex26	chr6	protein_coding	peroxisomal biogenesis factor 26
chr6	121277872	121279656	+	121277288	121279656	A5SS	0.5	50	50	ENSMUST00000064580.14	ENSMUSG00000030108.15	Slc6a13	chr6	protein_coding	solute carrier family 6 (neurotransmitter transporter, GABA), member 13
chr6	121334011	121335981	+	121334011;121335663	121335560;121335981	ES	0.5	50	50	ENSMUST00000166457.8	ENSMUSG00000030109.16	Slc6a12	chr6	protein_coding	solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12
chr6	121340288	121342188	+	121340288;121340815	121340645;121342188	ES	0.5	50	50	ENSMUST00000166457.8	ENSMUSG00000030109.16	Slc6a12	chr6	protein_coding	solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12
chr6	121320580	121324362	+	121320064	121324362	A5SS	0.33	50	50	ENSMUST00000166457.8	ENSMUSG00000030109.16	Slc6a12	chr6	protein_coding	solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12
chr6	121323956	121324362	+	121320064	121324362	A5SS	0.33	50	50	ENSMUST00000166457.8	ENSMUSG00000030109.16	Slc6a12	chr6	protein_coding	solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12
chr6	121324473	121328898	+	121324591	121328898	A5SS	0.5	50	50	ENSMUST00000166457.8	ENSMUSG00000030109.16	Slc6a12	chr6	protein_coding	solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12
chr6	121323956	121324362	+	121320580	121324362	A5SS	0.33	50	50	ENSMUST00000168295.2	ENSMUSG00000030109.16	Slc6a12	chr6	protein_coding	solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12
chr6	121336105	121337393	+	121336105	121338793	A3SS	0.5	50	50	ENSMUST00000163771.8	ENSMUSG00000030109.16	Slc6a12	chr6	protein_coding	solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12
chr6	121338052	121338793	+	121336105	121338793	A5SS	0.5	50	50	ENSMUST00000163771.8	ENSMUSG00000030109.16	Slc6a12	chr6	protein_coding	solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12
chr6	121340288	121342188	+	121340288	121340645	3pMXE	0.5	50	50	ENSMUST00000170339.2	ENSMUSG00000030109.16	Slc6a12	chr6	protein_coding	solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12
chr6	121353490	121356954	-	121353490;121356868	121355919;121356954	ES	0.5	50	50	ENSMUST00000129815.8	ENSMUSG00000040797.17	Iqsec3	chr6	protein_coding	IQ motif and Sec7 domain 3
chr6	121390575;121405526	121405256;121421116	-	121390575	121421116	cassetteExon	0.5	100	100	ENSMUST00000129815.8	ENSMUSG00000040797.17	Iqsec3	chr6	protein_coding	IQ motif and Sec7 domain 3
chr6	121356868	121356954	-	121353490	121356954	A3SS	0.5	50	50	ENSMUST00000152103.8	ENSMUSG00000040797.17	Iqsec3	chr6	protein_coding	IQ motif and Sec7 domain 3
chr6	121353490	121355919	-	121353490	121356954	A5SS	0.5	50	50	ENSMUST00000152103.8	ENSMUSG00000040797.17	Iqsec3	chr6	protein_coding	IQ motif and Sec7 domain 3
chr6	121613354	121615235	+	121612654	121615235	A5SS	0.5	50	50	ENSMUST00000204850.2	ENSMUSG00000030111.10	A2m	chr6	protein_coding	alpha-2-macroglobulin
chr6	122155857	122169495	+	122169237	122169495	A5SS&ES	0.5	50	50	ENSMUST00000190643.7	ENSMUSG00000101397.7	Mug-ps1	chr6	transcribed_unprocessed_pseudogene	murinoglobulin, pseudogene 1
chr6	122213430	122214190	+	122213430	122214050	A3SS	0.5	50	50	ENSMUST00000186891.7	ENSMUSG00000101397.7	Mug-ps1	chr6	transcribed_unprocessed_pseudogene	murinoglobulin, pseudogene 1
chr6	122221221	122222268	+	122221221	122222235	A3SS	0.5	50	50	ENSMUST00000186891.7	ENSMUSG00000101397.7	Mug-ps1	chr6	transcribed_unprocessed_pseudogene	murinoglobulin, pseudogene 1
chr6	122207745	122208380	+	122207739	122208380	A5SS	0.5	50	50	ENSMUST00000186891.7	ENSMUSG00000101397.7	Mug-ps1	chr6	transcribed_unprocessed_pseudogene	murinoglobulin, pseudogene 1
chr6	122210836	122211415	+	122210831	122211415	A5SS	0.5	50	50	ENSMUST00000186891.7	ENSMUSG00000101397.7	Mug-ps1	chr6	transcribed_unprocessed_pseudogene	murinoglobulin, pseudogene 1
chr6	122211643	122212389	+	122211639	122212389	A5SS	0.5	50	50	ENSMUST00000186891.7	ENSMUSG00000101397.7	Mug-ps1	chr6	transcribed_unprocessed_pseudogene	murinoglobulin, pseudogene 1
chr6	122212515	122212775	+	122212530	122212775	A5SS	0.5	50	50	ENSMUST00000186891.7	ENSMUSG00000101397.7	Mug-ps1	chr6	transcribed_unprocessed_pseudogene	murinoglobulin, pseudogene 1
chr6	122217388	122218163	+	122217382	122218163	A5SS	0.5	50	50	ENSMUST00000186891.7	ENSMUSG00000101397.7	Mug-ps1	chr6	transcribed_unprocessed_pseudogene	murinoglobulin, pseudogene 1
chr6	122223975	122225024	+	122223979	122225024	A5SS	0.5	50	50	ENSMUST00000186891.7	ENSMUSG00000101397.7	Mug-ps1	chr6	transcribed_unprocessed_pseudogene	murinoglobulin, pseudogene 1
chr6	122286125;122288586	122288563;122289193	+	122286125	122289193	cassetteExon	0.5	100	100	ENSMUST00000007602.15	ENSMUSG00000007458.15	M6pr	chr6	protein_coding	mannose-6-phosphate receptor, cation dependent
chr6	122311109	122313817	-	122311109;122312042	122311932;122313817	ES	0.5	50	50	ENSMUST00000081849.10	ENSMUSG00000040669.15	Phc1	chr6	protein_coding	polyhomeotic 1
chr6	122302909;122309612	122309481;122310250	-	122302909	122310250	cassetteExon	0.5	100	100	ENSMUST00000081849.10	ENSMUSG00000040669.15	Phc1	chr6	protein_coding	polyhomeotic 1
chr6	122302909;122309636	122309481;122310250	-	122302909	122310250	cassetteExon	0.5	100	100	ENSMUST00000081849.10	ENSMUSG00000040669.15	Phc1	chr6	protein_coding	polyhomeotic 1
chr6	122311109	122311925	-	122311109	122311932	A5SS	0.33	50	50	ENSMUST00000081849.10	ENSMUSG00000040669.15	Phc1	chr6	protein_coding	polyhomeotic 1
chr6	122309612	122310250	-	122309636	122310250	A3SS	0.33	50	50	ENSMUST00000079560.10	ENSMUSG00000040669.15	Phc1	chr6	protein_coding	polyhomeotic 1
chr6	122313974	122317156	-	122313974	122316557	5pMXE	0.16	50	50	ENSMUST00000161739.8	ENSMUSG00000040669.15	Phc1	chr6	protein_coding	polyhomeotic 1
chr6	122313974	122317504	-	122313974	122316557	5pMXE	0.16	50	50	ENSMUST00000161739.8	ENSMUSG00000040669.15	Phc1	chr6	protein_coding	polyhomeotic 1
chr6	122313974;122315414	122315379;122316557	-	122313974	122316557	cassetteExon	0.5	100	100	ENSMUST00000161739.8	ENSMUSG00000040669.15	Phc1	chr6	protein_coding	polyhomeotic 1
chr6	122313974	122315431	-	122313974	122316557	A5SS	0.16	50	50	ENSMUST00000161739.8	ENSMUSG00000040669.15	Phc1	chr6	protein_coding	polyhomeotic 1
chr6	122313974	122316577	-	122313974	122316557	A5SS	0.16	50	50	ENSMUST00000161739.8	ENSMUSG00000040669.15	Phc1	chr6	protein_coding	polyhomeotic 1
chr6	122313974	122316577	-	122313974	122315431	5pMXE	0.16	50	50	ENSMUST00000160696.8	ENSMUSG00000040669.15	Phc1	chr6	protein_coding	polyhomeotic 1
chr6	122313974	122317156	-	122313974	122315431	5pMXE	0.16	50	50	ENSMUST00000160696.8	ENSMUSG00000040669.15	Phc1	chr6	protein_coding	polyhomeotic 1
chr6	122313974	122317504	-	122313974	122315431	5pMXE	0.16	50	50	ENSMUST00000160696.8	ENSMUSG00000040669.15	Phc1	chr6	protein_coding	polyhomeotic 1
chr6	122313974	122315379	-	122313974	122315431	A5SS	0.16	50	50	ENSMUST00000160696.8	ENSMUSG00000040669.15	Phc1	chr6	protein_coding	polyhomeotic 1
chr6	122311109;122312042	122311925;122313817	-	122311109	122313817	cassetteExon	0.5	100	100	ENSMUST00000159252.8	ENSMUSG00000040669.15	Phc1	chr6	protein_coding	polyhomeotic 1
chr6	122313974	122315379	-	122313974	122317504	A5SS	0.16	50	50	ENSMUST00000112600.9	ENSMUSG00000040669.15	Phc1	chr6	protein_coding	polyhomeotic 1
chr6	122313974	122316577	-	122313974	122317504	A5SS	0.16	50	50	ENSMUST00000112600.9	ENSMUSG00000040669.15	Phc1	chr6	protein_coding	polyhomeotic 1
chr6	122313974	122317156	-	122313974	122317504	A5SS	0.16	50	50	ENSMUST00000112600.9	ENSMUSG00000040669.15	Phc1	chr6	protein_coding	polyhomeotic 1
chr6	122302909	122310250	-	122309636	122310250	A3SS&ES	0.33	50	50	ENSMUST00000161290.8	ENSMUSG00000040669.15	Phc1	chr6	protein_coding	polyhomeotic 1
chr6	122313974	122315379	-	122313974	122317156	A5SS	0.16	50	50	ENSMUST00000160843.8	ENSMUSG00000040669.15	Phc1	chr6	protein_coding	polyhomeotic 1
chr6	122313974	122316577	-	122313974	122317156	A5SS	0.16	50	50	ENSMUST00000160843.8	ENSMUSG00000040669.15	Phc1	chr6	protein_coding	polyhomeotic 1
chr6	122311109	122313817	-	122311109	122311932	5pMXE	0.33	50	50	ENSMUST00000160863.2	ENSMUSG00000040669.15	Phc1	chr6	protein_coding	polyhomeotic 1
chr6	122313974	122315379	-	122313974	122316577	A5SS	0.16	50	50	ENSMUST00000161149.8	ENSMUSG00000040669.15	Phc1	chr6	protein_coding	polyhomeotic 1
chr6	122441167	122449112	-	122441167	122443382	5pMXE	0.33	50	50	ENSMUST00000146274.8	ENSMUSG00000040649.16	Rimklb	chr6	protein_coding	ribosomal modification protein rimK-like family member B
chr6	122441167	122449498	-	122441167	122443382	5pMXE	0.33	50	50	ENSMUST00000146274.8	ENSMUSG00000040649.16	Rimklb	chr6	protein_coding	ribosomal modification protein rimK-like family member B
chr6	122426874	122429513	-	122426951	122429513	A3SS	0.5	50	50	ENSMUST00000146274.8	ENSMUSG00000040649.16	Rimklb	chr6	protein_coding	ribosomal modification protein rimK-like family member B
chr6	122449722	122475591	-	122449722	122463050	5pMXE	0.33	50	50	ENSMUST00000068242.9	ENSMUSG00000040649.16	Rimklb	chr6	protein_coding	ribosomal modification protein rimK-like family member B
chr6	122441167;122449173	122449112;122449498	-	122441167	122449498	cassetteExon	0.5	100	100	ENSMUST00000068242.9	ENSMUSG00000040649.16	Rimklb	chr6	protein_coding	ribosomal modification protein rimK-like family member B
chr6	122449722	122463309	-	122449722	122463050	A5SS	0.33	50	50	ENSMUST00000068242.9	ENSMUSG00000040649.16	Rimklb	chr6	protein_coding	ribosomal modification protein rimK-like family member B
chr6	122449722	122475591	-	122449722	122463309	5pMXE	0.33	50	50	ENSMUST00000205114.2	ENSMUSG00000040649.16	Rimklb	chr6	protein_coding	ribosomal modification protein rimK-like family member B
chr6	122491359	122497538	+	122491359	122492307	3pMXE	0.5	50	50	ENSMUST00000125728.8	ENSMUSG00000030116.15	Mfap5	chr6	protein_coding	microfibrillar associated protein 5
chr6	122491359	122497538	+	122491359;122492342	122492307;122497538	ES	0.5	50	50	ENSMUST00000032210.14	ENSMUSG00000030116.15	Mfap5	chr6	protein_coding	microfibrillar associated protein 5
chr6	122502997	122505278	+	122502997;122503819	122503746;122505278	ES	0.5	50	50	ENSMUST00000032210.14	ENSMUSG00000030116.15	Mfap5	chr6	protein_coding	microfibrillar associated protein 5
chr6	122497887;122498887	122498852;122501446	+	122497887	122501446	cassetteExon	0.5	100	100	ENSMUST00000032210.14	ENSMUSG00000030116.15	Mfap5	chr6	protein_coding	microfibrillar associated protein 5
chr6	122497887;122498887	122498852;122502910	+	122497887;122501469	122501446;122502910	MXE	0.5	100	100	ENSMUST00000032210.14	ENSMUSG00000030116.15	Mfap5	chr6	protein_coding	microfibrillar associated protein 5
chr6	122498887	122502910	+	122498887;122501469	122501446;122502910	ES	0.5	50	50	ENSMUST00000148517.8	ENSMUSG00000030116.15	Mfap5	chr6	protein_coding	microfibrillar associated protein 5
chr6	122492342;122501469	122501446;122502910	+	122492342;122498887	122497538;122502910	MXE	0.5	100	100	ENSMUST00000118626.8	ENSMUSG00000030116.15	Mfap5	chr6	protein_coding	microfibrillar associated protein 5
chr6	122491359;122492342	122492307;122501446	+	122491359;122498887	122497538;122501446	MXE	0.5	100	100	ENSMUST00000142896.8	ENSMUSG00000030116.15	Mfap5	chr6	protein_coding	microfibrillar associated protein 5
chr6	122491359;122497887	122497538;122501446	+	122491359;122492342	122492307;122501446	MXE	0.5	100	100	ENSMUST00000121656.2	ENSMUSG00000030116.15	Mfap5	chr6	protein_coding	microfibrillar associated protein 5
chr6	122492342;122497887	122497538;122501446	+	122492342	122501446	cassetteExon	0.5	100	100	ENSMUST00000121656.2	ENSMUSG00000030116.15	Mfap5	chr6	protein_coding	microfibrillar associated protein 5
chr6	122498887	122501446	+	122492342	122501446	A5SS	0.33	50	50	ENSMUST00000121656.2	ENSMUSG00000030116.15	Mfap5	chr6	protein_coding	microfibrillar associated protein 5
chr6	122498887	122502910	+	122501469	122502910	A5SS&ES	0.5	50	50	ENSMUST00000121656.2	ENSMUSG00000030116.15	Mfap5	chr6	protein_coding	microfibrillar associated protein 5
chr6	122537691	122538000	+	122536577	122538000	A5SS	0.5	50	50	ENSMUST00000043301.14	ENSMUSG00000040627.15	Aicda	chr6	protein_coding	activation-induced cytidine deaminase
chr6	122537309;122545188	122545024;122547760	-	122537309	122547760	cassetteExon	0.5	100	100	ENSMUST00000162980.2	ENSMUSG00000090192.2	Gm16556	chr6	lncRNA	predicted gene 16556
chr6	122558709	122568046	-	122558709;122565131	122565104;122568046	ES	0.5	50	50	ENSMUST00000112586.8	ENSMUSG00000040613.15	Apobec1	chr6	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1
chr6	122564312	122565104	-	122558709	122565104	A3SS	0.5	50	50	ENSMUST00000112586.8	ENSMUSG00000040613.15	Apobec1	chr6	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1
chr6	122568163	122573591	-	122568219	122573591	A3SS	0.5	50	50	ENSMUST00000112586.8	ENSMUSG00000040613.15	Apobec1	chr6	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1
chr6	122568163	122577017	-	122573736	122577017	A3SS&ES	0.5	50	50	ENSMUST00000112586.8	ENSMUSG00000040613.15	Apobec1	chr6	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1
chr6	122577084	122577198	-	122577084	122579216	A5SS	0.5	50	50	ENSMUST00000112586.8	ENSMUSG00000040613.15	Apobec1	chr6	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1
chr6	122568163	122577017	-	122568163;122573736	122573591;122577017	ES	0.5	50	50	ENSMUST00000112585.8	ENSMUSG00000040613.15	Apobec1	chr6	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1
chr6	122558709	122568046	-	122565131	122568046	3pMXE	0.5	50	50	ENSMUST00000143356.2	ENSMUSG00000040613.15	Apobec1	chr6	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1
chr6	122585283	122586655	-	122584094	122586655	A3SS	0.5	50	50	ENSMUST00000032211.5	ENSMUSG00000030117.6	Gdf3	chr6	protein_coding	growth differentiation factor 3
chr6	122603770	122605536	+	122603569	122605536	A5SS	0.5	50	50	ENSMUST00000049644.9	ENSMUSG00000046323.9	Dppa3	chr6	protein_coding	developmental pluripotency-associated 3
chr6	122684567	122684771	+	122684475	122684771	A5SS	0.5	50	50	ENSMUST00000112581.8	ENSMUSG00000012396.13	Nanog	chr6	protein_coding	Nanog homeobox
chr6	122714257	122717347	-	122714257;122716952	122716792;122717347	ES	0.5	50	50	ENSMUST00000032476.11	ENSMUSG00000003153.11	Slc2a3	chr6	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 3
chr6	122717439	122756877	-	122717439	122719335	5pMXE	0.25	50	50	ENSMUST00000032476.11	ENSMUSG00000003153.11	Slc2a3	chr6	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 3
chr6	122717439	122774761	-	122717439	122719335	5pMXE	0.25	50	50	ENSMUST00000032476.11	ENSMUSG00000003153.11	Slc2a3	chr6	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 3
chr6	122717439	122719058	-	122717439	122719335	A5SS	0.25	50	50	ENSMUST00000032476.11	ENSMUSG00000003153.11	Slc2a3	chr6	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 3
chr6	122714257	122717347	-	122716952	122717347	A3SS	0.5	50	50	ENSMUST00000168704.8	ENSMUSG00000003153.11	Slc2a3	chr6	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 3
chr6	122717439	122719058	-	122717439	122774761	A5SS	0.25	50	50	ENSMUST00000165884.8	ENSMUSG00000003153.11	Slc2a3	chr6	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 3
chr6	122717439	122756877	-	122717439	122774761	A5SS	0.25	50	50	ENSMUST00000165884.8	ENSMUSG00000003153.11	Slc2a3	chr6	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 3
chr6	122717439	122719058	-	122717439	122756877	A5SS	0.25	50	50	ENSMUST00000171541.2	ENSMUSG00000003153.11	Slc2a3	chr6	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 3
chr6	122803696	122805116	+	122797929	122805116	A5SS	0.5	50	50	ENSMUST00000003238.14	ENSMUSG00000003154.16	Foxj2	chr6	protein_coding	forkhead box J2
chr6	122851622	122852483	+	122851622	122857372	A3SS	0.5	50	50	ENSMUST00000032477.6	ENSMUSG00000030327.9	Necap1	chr6	protein_coding	NECAP endocytosis associated 1
chr6	122931111	122943381	+	122931111;122941307	122941206;122943381	ES	0.5	50	50	ENSMUST00000117173.8	ENSMUSG00000043832.14	Clec4a3	chr6	protein_coding	C-type lectin domain family 4, member a3
chr6	123027659;123042996	123042898;123045396	+	123027659	123045396	cassetteExon	0.5	100	100	ENSMUST00000077228.11	ENSMUSG00000030147.13	Clec4b1	chr6	protein_coding	C-type lectin domain family 4, member b1
chr6	123099711	123100493	+	123099711	123100418	A3SS	0.5	50	50	ENSMUST00000159891.7	ENSMUSG00000030148.16	Clec4a2	chr6	protein_coding	C-type lectin domain family 4, member a2
chr6	123105012;123116087	123116016;123116210	+	123105012	123116210	cassetteExon	0.5	100	100	ENSMUST00000161365.8	ENSMUSG00000030148.16	Clec4a2	chr6	protein_coding	C-type lectin domain family 4, member a2
chr6	123207002;123209153	123209052;123212403	+	123207002;123207552	123207463;123212403	MXE	0.5	100	100	ENSMUST00000112554.9	ENSMUSG00000023349.15	Clec4n	chr6	protein_coding	C-type lectin domain family 4, member n
chr6	123207002;123209153	123209052;123223400	+	123207002;123221552	123207463;123223400	MXE	0.5	100	100	ENSMUST00000112554.9	ENSMUSG00000023349.15	Clec4n	chr6	protein_coding	C-type lectin domain family 4, member n
chr6	123207552;123209153	123209052;123212403	+	123207552	123212403	cassetteExon	0.5	100	100	ENSMUST00000112554.9	ENSMUSG00000023349.15	Clec4n	chr6	protein_coding	C-type lectin domain family 4, member n
chr6	123207552;123209153	123209052;123223400	+	123207552;123221552	123212403;123223400	MXE	0.5	100	100	ENSMUST00000112554.9	ENSMUSG00000023349.15	Clec4n	chr6	protein_coding	C-type lectin domain family 4, member n
chr6	123207552	123207652	+	123207552	123212403	A3SS	0.25	50	50	ENSMUST00000112554.9	ENSMUSG00000023349.15	Clec4n	chr6	protein_coding	C-type lectin domain family 4, member n
chr6	123207552	123207704	+	123207552	123212403	A3SS	0.25	50	50	ENSMUST00000112554.9	ENSMUSG00000023349.15	Clec4n	chr6	protein_coding	C-type lectin domain family 4, member n
chr6	123207002	123209052	+	123207002;123207552	123207463;123209052	ES	0.33	50	50	ENSMUST00000024118.11	ENSMUSG00000023349.15	Clec4n	chr6	protein_coding	C-type lectin domain family 4, member n
chr6	123207552;123207829	123207652;123209052	+	123207552	123209052	cassetteExon	0.5	100	100	ENSMUST00000024118.11	ENSMUSG00000023349.15	Clec4n	chr6	protein_coding	C-type lectin domain family 4, member n
chr6	123207552;123207829	123207704;123209052	+	123207552	123209052	cassetteExon	0.5	100	100	ENSMUST00000024118.11	ENSMUSG00000023349.15	Clec4n	chr6	protein_coding	C-type lectin domain family 4, member n
chr6	123207552	123209052	+	123207552	123207704	3pMXE	0.25	50	50	ENSMUST00000144840.2	ENSMUSG00000023349.15	Clec4n	chr6	protein_coding	C-type lectin domain family 4, member n
chr6	123207552	123207652	+	123207552	123207704	A3SS	0.25	50	50	ENSMUST00000144840.2	ENSMUSG00000023349.15	Clec4n	chr6	protein_coding	C-type lectin domain family 4, member n
chr6	123207002;123207829	123207463;123209052	+	123207002	123209052	cassetteExon	0.5	100	100	ENSMUST00000117130.8	ENSMUSG00000023349.15	Clec4n	chr6	protein_coding	C-type lectin domain family 4, member n
chr6	123207552	123212403	+	123207552	123209052	A3SS&ES	0.25	50	50	ENSMUST00000205129.2	ENSMUSG00000023349.15	Clec4n	chr6	protein_coding	C-type lectin domain family 4, member n
chr6	123209153	123212403	+	123209153	123223400	A3SS	0.5	50	50	ENSMUST00000205129.2	ENSMUSG00000023349.15	Clec4n	chr6	protein_coding	C-type lectin domain family 4, member n
chr6	123221552	123223400	+	123209153	123223400	A5SS	0.5	50	50	ENSMUST00000205129.2	ENSMUSG00000023349.15	Clec4n	chr6	protein_coding	C-type lectin domain family 4, member n
chr6	123244121	123244951	+	123244121	123245028	A3SS	0.5	50	50	ENSMUST00000204826.3	ENSMUSG00000030144.5	Clec4d	chr6	protein_coding	C-type lectin domain family 4, member d
chr6	123263318	123265853	-	123263318;123263477	123263391;123265853	ES	0.25	50	50	ENSMUST00000032239.11	ENSMUSG00000030142.11	Clec4e	chr6	protein_coding	C-type lectin domain family 4, member e
chr6	123264911	123265853	-	123263477	123265853	A3SS	0.25	50	50	ENSMUST00000032239.11	ENSMUSG00000030142.11	Clec4e	chr6	protein_coding	C-type lectin domain family 4, member e
chr6	123262543	123265853	-	123262543	123263167	A5SS	0.5	50	50	ENSMUST00000176443.8	ENSMUSG00000030142.11	Clec4e	chr6	protein_coding	C-type lectin domain family 4, member e
chr6	123262543	123265853	-	123262543;123263477	123263167;123265853	ES	0.25	50	50	ENSMUST00000175995.8	ENSMUSG00000030142.11	Clec4e	chr6	protein_coding	C-type lectin domain family 4, member e
chr6	123263318	123265853	-	123263477	123265853	A3SS	0.25	50	50	ENSMUST00000175995.8	ENSMUSG00000030142.11	Clec4e	chr6	protein_coding	C-type lectin domain family 4, member e
chr6	123263318	123265853	-	123263318	123263391	A5SS	0.5	50	50	ENSMUST00000176831.8	ENSMUSG00000030142.11	Clec4e	chr6	protein_coding	C-type lectin domain family 4, member e
chr6	123262543	123265853	-	123262543;123263318	123263167;123265853	ES	0.25	50	50	ENSMUST00000177367.8	ENSMUSG00000030142.11	Clec4e	chr6	protein_coding	C-type lectin domain family 4, member e
chr6	123264911	123265853	-	123263318	123265853	A3SS	0.25	50	50	ENSMUST00000177367.8	ENSMUSG00000030142.11	Clec4e	chr6	protein_coding	C-type lectin domain family 4, member e
chr6	123264911	123265853	-	123262543	123265853	A3SS	0.25	50	50	ENSMUST00000176096.2	ENSMUSG00000030142.11	Clec4e	chr6	protein_coding	C-type lectin domain family 4, member e
chr6	123367703	123370810	-	123363113	123370810	A3SS	0.5	50	50	ENSMUST00000172199.3	ENSMUSG00000094145.3	Vmn2r20	chr6	protein_coding	vomeronasal 2, receptor 20
chr6	123363113	123366518	-	123363113	123370810	A5SS	0.5	50	50	ENSMUST00000172199.3	ENSMUSG00000094145.3	Vmn2r20	chr6	protein_coding	vomeronasal 2, receptor 20
chr6	123363113	123370810	-	123363113;123367703	123366518;123370810	ES	0.5	50	50	ENSMUST00000232807.2	ENSMUSG00000094145.3	Vmn2r20	chr6	protein_coding	vomeronasal 2, receptor 20
chr6	123681606;123682828	123682723;123689639	+	123681606	123689639	cassetteExon	0.5	100	100	ENSMUST00000233414.2	ENSMUSG00000091620.4	Vmn2r23	chr6	protein_coding	vomeronasal 2, receptor 23
chr6	123681606;123689500	123689325;123689639	+	123681606	123689639	cassetteExon	0.5	100	100	ENSMUST00000233414.2	ENSMUSG00000091620.4	Vmn2r23	chr6	protein_coding	vomeronasal 2, receptor 23
chr6	123681606;123682828	123682723;123689639	+	123681606;123689500	123689325;123689639	MXE	0.5	100	100	ENSMUST00000233267.2	ENSMUSG00000091620.4	Vmn2r23	chr6	protein_coding	vomeronasal 2, receptor 23
chr6	123757649	123781119	+	123757649;123764447	123763641;123781119	ES	0.5	50	50	ENSMUST00000075095.7	ENSMUSG00000072780.4	Vmn2r24	chr6	protein_coding	vomeronasal 2, receptor 24
chr6	123781343	123792347	+	123781343;123783473	123783350;123792347	ES	0.5	50	50	ENSMUST00000075095.7	ENSMUSG00000072780.4	Vmn2r24	chr6	protein_coding	vomeronasal 2, receptor 24
chr6	123757649	123763641	+	123757649	123781119	A3SS	0.5	50	50	ENSMUST00000233759.2	ENSMUSG00000072780.4	Vmn2r24	chr6	protein_coding	vomeronasal 2, receptor 24
chr6	123764447	123781119	+	123757649	123781119	A5SS	0.5	50	50	ENSMUST00000233759.2	ENSMUSG00000072780.4	Vmn2r24	chr6	protein_coding	vomeronasal 2, receptor 24
chr6	123805529;123810860	123810731;123816254	-	123805529	123816254	cassetteExon	0.5	100	100	ENSMUST00000162046.3	ENSMUSG00000094672.3	Vmn2r25	chr6	protein_coding	vomeronasal 2, receptor 25
chr6	123815751	123816254	-	123805529	123816254	A3SS	0.33	50	50	ENSMUST00000162046.3	ENSMUSG00000094672.3	Vmn2r25	chr6	protein_coding	vomeronasal 2, receptor 25
chr6	123805529	123816254	-	123805529;123815751	123810731;123816254	ES	0.33	50	50	ENSMUST00000233160.2	ENSMUSG00000094672.3	Vmn2r25	chr6	protein_coding	vomeronasal 2, receptor 25
chr6	123810860	123816254	-	123815751	123816254	A3SS	0.33	50	50	ENSMUST00000233160.2	ENSMUSG00000094672.3	Vmn2r25	chr6	protein_coding	vomeronasal 2, receptor 25
chr6	123946620	123953280	-	123940951	123953280	A3SS	0.5	50	50	ENSMUST00000176108.4	ENSMUSG00000093385.4	A330044P14Rik	chr6	transcribed_unprocessed_pseudogene	RIKEN cDNA A330044P14 gene
chr6	123937026	123945814	-	123937026	123940592	A5SS&ES	0.5	50	50	ENSMUST00000176108.4	ENSMUSG00000093385.4	A330044P14Rik	chr6	transcribed_unprocessed_pseudogene	RIKEN cDNA A330044P14 gene
chr6	123937026;123940951	123940592;123953280	-	123937026;123946620	123945814;123953280	MXE	0.5	100	100	ENSMUST00000203311.2	ENSMUSG00000093385.4	A330044P14Rik	chr6	transcribed_unprocessed_pseudogene	RIKEN cDNA A330044P14 gene
chr6	124016863;124022428	124022299;124027588	+	124016863	124027588	cassetteExon	0.5	100	100	ENSMUST00000032238.5	ENSMUSG00000096630.3	Vmn2r26	chr6	protein_coding	vomeronasal 2, receptor 26
chr6	124029220	124030818	+	124027812	124030818	A5SS	0.5	50	50	ENSMUST00000032238.5	ENSMUSG00000096630.3	Vmn2r26	chr6	protein_coding	vomeronasal 2, receptor 26
chr6	124122795	124125340	-	124122795;124123333	124123190;124125340	ES	0.5	50	50	ENSMUST00000236345.2	ENSMUSG00000107718.3	Vmn2r-ps34	chr6	transcribed_unprocessed_pseudogene	vomeronasal 2, receptor, pseudogene 34
chr6	124116595	124122672	-	124108573	124122672	A3SS	0.5	50	50	ENSMUST00000236345.2	ENSMUSG00000107718.3	Vmn2r-ps34	chr6	transcribed_unprocessed_pseudogene	vomeronasal 2, receptor, pseudogene 34
chr6	124142679	124148479	-	124125564	124148479	A3SS	0.5	50	50	ENSMUST00000236620.2	ENSMUSG00000107718.3	Vmn2r-ps34	chr6	transcribed_unprocessed_pseudogene	vomeronasal 2, receptor, pseudogene 34
chr6	124125564	124141873	-	124125564	124148479	A5SS	0.5	50	50	ENSMUST00000236620.2	ENSMUSG00000107718.3	Vmn2r-ps34	chr6	transcribed_unprocessed_pseudogene	vomeronasal 2, receptor, pseudogene 34
chr6	124125564	124148479	-	124125564;124142679	124141873;124148479	ES	0.5	50	50	ENSMUST00000204750.3	ENSMUSG00000107718.3	Vmn2r-ps34	chr6	transcribed_unprocessed_pseudogene	vomeronasal 2, receptor, pseudogene 34
chr6	124169459	124174180	-	124167807	124174180	A3SS	0.5	50	50	ENSMUST00000233936.2	ENSMUSG00000072778.4	Vmn2r27	chr6	protein_coding	vomeronasal 2, receptor27
chr6	124304946	124305921	+	124304946	124306004	A3SS	0.5	50	50	ENSMUST00000032234.5	ENSMUSG00000008845.10	Cd163	chr6	protein_coding	CD163 antigen
chr6	124380866	124381589	-	124380866;124381202	124381092;124381589	ES	0.33	50	50	ENSMUST00000112532.8	ENSMUSG00000005069.13	Pex5	chr6	protein_coding	peroxisomal biogenesis factor 5
chr6	124381181	124381589	-	124381202	124381589	A3SS	0.33	50	50	ENSMUST00000112532.8	ENSMUSG00000005069.13	Pex5	chr6	protein_coding	peroxisomal biogenesis factor 5
chr6	124390749	124390966	-	124390660	124390966	A3SS	0.5	50	50	ENSMUST00000112532.8	ENSMUSG00000005069.13	Pex5	chr6	protein_coding	peroxisomal biogenesis factor 5
chr6	124391409	124391726	-	124391409	124391969	A5SS	0.33	50	50	ENSMUST00000112532.8	ENSMUSG00000005069.13	Pex5	chr6	protein_coding	peroxisomal biogenesis factor 5
chr6	124391409	124391932	-	124391409	124391969	A5SS	0.33	50	50	ENSMUST00000112532.8	ENSMUSG00000005069.13	Pex5	chr6	protein_coding	peroxisomal biogenesis factor 5
chr6	124380866	124381589	-	124380866;124381181	124381092;124381589	ES	0.33	50	50	ENSMUST00000112530.8	ENSMUSG00000005069.13	Pex5	chr6	protein_coding	peroxisomal biogenesis factor 5
chr6	124391409	124391932	-	124391409	124391726	5pMXE	0.33	50	50	ENSMUST00000112531.8	ENSMUSG00000005069.13	Pex5	chr6	protein_coding	peroxisomal biogenesis factor 5
chr6	124409119	124410367	-	124409119;124409884	124409646;124410367	ES	0.5	50	50	ENSMUST00000239139.2	ENSMUSG00000008153.13	Clstn3	chr6	protein_coding	calsyntenin 3
chr6	124413912	124415229	-	124413912;124414479	124414334;124415229	ES	0.5	50	50	ENSMUST00000112523.8	ENSMUSG00000008153.13	Clstn3	chr6	protein_coding	calsyntenin 3
chr6	124439191	124440936	-	124439191	124439641	5pMXE	0.33	50	50	ENSMUST00000112523.8	ENSMUSG00000008153.13	Clstn3	chr6	protein_coding	calsyntenin 3
chr6	124439191	124441380	-	124439191	124439641	5pMXE	0.33	50	50	ENSMUST00000112523.8	ENSMUSG00000008153.13	Clstn3	chr6	protein_coding	calsyntenin 3
chr6	124433135	124433836	-	124428427	124433836	A3SS	0.5	50	50	ENSMUST00000112523.8	ENSMUSG00000008153.13	Clstn3	chr6	protein_coding	calsyntenin 3
chr6	124409119	124409646	-	124409119	124413777	A5SS	0.33	50	50	ENSMUST00000112523.8	ENSMUSG00000008153.13	Clstn3	chr6	protein_coding	calsyntenin 3
chr6	124409119	124410367	-	124409119	124413777	A5SS	0.33	50	50	ENSMUST00000112523.8	ENSMUSG00000008153.13	Clstn3	chr6	protein_coding	calsyntenin 3
chr6	124439191	124440936	-	124439191	124441380	A5SS	0.33	50	50	ENSMUST00000008297.5	ENSMUSG00000008153.13	Clstn3	chr6	protein_coding	calsyntenin 3
chr6	124409119	124410367	-	124409119	124409646	A5SS	0.33	50	50	ENSMUST00000238807.2	ENSMUSG00000008153.13	Clstn3	chr6	protein_coding	calsyntenin 3
chr6	124518447	124519147	-	124518447	124519152	A5SS	0.25	50	50	ENSMUST00000160505.8	ENSMUSG00000038521.18	C1s1	chr6	protein_coding	complement component 1, s subcomponent 1
chr6	124518447	124519157	-	124518447	124519152	A5SS	0.25	50	50	ENSMUST00000160505.8	ENSMUSG00000038521.18	C1s1	chr6	protein_coding	complement component 1, s subcomponent 1
chr6	124518447	124519227	-	124518447	124519152	A5SS	0.25	50	50	ENSMUST00000160505.8	ENSMUSG00000038521.18	C1s1	chr6	protein_coding	complement component 1, s subcomponent 1
chr6	124518447	124519147	-	124518447	124519227	A5SS	0.25	50	50	ENSMUST00000162443.8	ENSMUSG00000038521.18	C1s1	chr6	protein_coding	complement component 1, s subcomponent 1
chr6	124518447	124519157	-	124518447	124519227	A5SS	0.25	50	50	ENSMUST00000162443.8	ENSMUSG00000038521.18	C1s1	chr6	protein_coding	complement component 1, s subcomponent 1
chr6	124518447	124519147	-	124518447	124519157	A5SS	0.25	50	50	ENSMUST00000159463.8	ENSMUSG00000038521.18	C1s1	chr6	protein_coding	complement component 1, s subcomponent 1
chr6	124675140	124676970	+	124675140;124676308	124676202;124676970	ES	0.5	50	50	ENSMUST00000135516.8	ENSMUSG00000004270.14	Lpcat3	chr6	protein_coding	lysophosphatidylcholine acyltransferase 3
chr6	124679541	124679722	+	124679541	124679969	A3SS	0.5	50	50	ENSMUST00000135516.8	ENSMUSG00000004270.14	Lpcat3	chr6	protein_coding	lysophosphatidylcholine acyltransferase 3
chr6	124675140	124676970	+	124675140	124676202	3pMXE	0.5	50	50	ENSMUST00000141069.8	ENSMUSG00000004270.14	Lpcat3	chr6	protein_coding	lysophosphatidylcholine acyltransferase 3
chr6	124681621	124682121	-	124681621;124682051	124681902;124682121	ES	0.5	50	50	ENSMUST00000004379.8	ENSMUSG00000004268.12	Emg1	chr6	protein_coding	EMG1 N1-specific pseudouridine methyltransferase
chr6	124682619	124688839	-	124682619;124682805	124682704;124688839	ES	0.5	50	50	ENSMUST00000004379.8	ENSMUSG00000004268.12	Emg1	chr6	protein_coding	EMG1 N1-specific pseudouridine methyltransferase
chr6	124681621	124682121	-	124681621	124681902	A5SS	0.5	50	50	ENSMUST00000142187.8	ENSMUSG00000004268.12	Emg1	chr6	protein_coding	EMG1 N1-specific pseudouridine methyltransferase
chr6	124692993	124693569	+	124692993;124693393	124693388;124693569	ES	0.5	50	50	ENSMUST00000004375.16	ENSMUSG00000004264.18	Phb2	chr6	protein_coding	prohibitin 2
chr6	124691131	124691739	+	124691131	124691793	A3SS	0.33	50	50	ENSMUST00000004375.16	ENSMUSG00000004264.18	Phb2	chr6	protein_coding	prohibitin 2
chr6	124691131	124692049	+	124691131	124691793	A3SS&ES	0.33	50	50	ENSMUST00000004375.16	ENSMUSG00000004264.18	Phb2	chr6	protein_coding	prohibitin 2
chr6	124692993	124693569	+	124693393	124693569	A5SS	0.5	50	50	ENSMUST00000145447.8	ENSMUSG00000004264.18	Phb2	chr6	protein_coding	prohibitin 2
chr6	124691131	124692049	+	124691131	124691739	3pMXE	0.33	50	50	ENSMUST00000147974.8	ENSMUSG00000004264.18	Phb2	chr6	protein_coding	prohibitin 2
chr6	124692993	124693569	+	124692993	124693388	3pMXE	0.5	50	50	ENSMUST00000129422.2	ENSMUSG00000004264.18	Phb2	chr6	protein_coding	prohibitin 2
chr6	124709823	124715462	-	124709823	124709909	5pMXE	0.5	50	50	ENSMUST00000112484.10	ENSMUSG00000004266.16	Ptpn6	chr6	protein_coding	protein tyrosine phosphatase, non-receptor type 6
chr6	124697871	124698091	-	124697871	124698043	A5SS	0.5	50	50	ENSMUST00000112484.10	ENSMUSG00000004266.16	Ptpn6	chr6	protein_coding	protein tyrosine phosphatase, non-receptor type 6
chr6	124702321	124704279	-	124702321	124704348	A5SS	0.33	50	50	ENSMUST00000112484.10	ENSMUSG00000004266.16	Ptpn6	chr6	protein_coding	protein tyrosine phosphatase, non-receptor type 6
chr6	124702321	124704363	-	124702321	124704348	A5SS	0.33	50	50	ENSMUST00000112484.10	ENSMUSG00000004266.16	Ptpn6	chr6	protein_coding	protein tyrosine phosphatase, non-receptor type 6
chr6	124705933	124709364	-	124705933	124709263	A5SS	0.5	50	50	ENSMUST00000112484.10	ENSMUSG00000004266.16	Ptpn6	chr6	protein_coding	protein tyrosine phosphatase, non-receptor type 6
chr6	124709457	124715462	-	124709457;124709823	124709701;124715462	ES	0.5	50	50	ENSMUST00000004377.15	ENSMUSG00000004266.16	Ptpn6	chr6	protein_coding	protein tyrosine phosphatase, non-receptor type 6
chr6	124702321	124704279	-	124702321	124704363	A5SS	0.33	50	50	ENSMUST00000172690.2	ENSMUSG00000004266.16	Ptpn6	chr6	protein_coding	protein tyrosine phosphatase, non-receptor type 6
chr6	124709457	124715462	-	124709457	124709701	5pMXE	0.5	50	50	ENSMUST00000173228.2	ENSMUSG00000004266.16	Ptpn6	chr6	protein_coding	protein tyrosine phosphatase, non-receptor type 6
chr6	124716376	124717482	-	124716478	124717482	A3SS	0.5	50	50	ENSMUST00000129823.2	ENSMUSG00000072772.4	Grcc10	chr6	protein_coding	gene rich cluster, C10 gene
chr6	124717658	124719875	-	124717658	124717883	5pMXE	0.5	50	50	ENSMUST00000004389.6	ENSMUSG00000072772.4	Grcc10	chr6	protein_coding	gene rich cluster, C10 gene
chr6	124726884	124732947	-	124726884;124730662	124730580;124732947	ES	0.5	50	50	ENSMUST00000129411.7	ENSMUSG00000107478.2	Gm45234	chr6	protein_coding	predicted gene 45234
chr6	124722379	124722493	-	124722379	124722602	A5SS	0.5	50	50	ENSMUST00000129411.7	ENSMUSG00000107478.2	Gm45234	chr6	protein_coding	predicted gene 45234
chr6	124726884	124730580	-	124726884	124733259	A5SS	0.33	50	50	ENSMUST00000088357.12	ENSMUSG00000004263.16	Atn1	chr6	protein_coding	atrophin 1
chr6	124726884	124732947	-	124726884	124733259	A5SS	0.33	50	50	ENSMUST00000088357.12	ENSMUSG00000004263.16	Atn1	chr6	protein_coding	atrophin 1
chr6	124740887;124743290	124743068;124743996	-	124740887	124743996	cassetteExon	0.5	100	100	ENSMUST00000112476.8	ENSMUSG00000004267.17	Eno2	chr6	protein_coding	enolase 2, gamma neuronal
chr6	124740140	124740690	-	124740169	124740690	A3SS	0.5	50	50	ENSMUST00000112476.8	ENSMUSG00000004267.17	Eno2	chr6	protein_coding	enolase 2, gamma neuronal
chr6	124743627	124743996	-	124740887	124743996	A3SS	0.33	50	50	ENSMUST00000112476.8	ENSMUSG00000004267.17	Eno2	chr6	protein_coding	enolase 2, gamma neuronal
chr6	124743627	124744664	-	124744561	124744664	A3SS&ES	0.5	50	50	ENSMUST00000112476.8	ENSMUSG00000004267.17	Eno2	chr6	protein_coding	enolase 2, gamma neuronal
chr6	124745297	124746400	-	124745300	124746400	A3SS	0.33	50	50	ENSMUST00000112476.8	ENSMUSG00000004267.17	Eno2	chr6	protein_coding	enolase 2, gamma neuronal
chr6	124745683	124746400	-	124745300	124746400	A3SS	0.33	50	50	ENSMUST00000112476.8	ENSMUSG00000004267.17	Eno2	chr6	protein_coding	enolase 2, gamma neuronal
chr6	124744759	124745061	-	124744759	124745201	A5SS	0.33	50	50	ENSMUST00000112476.8	ENSMUSG00000004267.17	Eno2	chr6	protein_coding	enolase 2, gamma neuronal
chr6	124744759	124745150	-	124744759	124745201	A5SS	0.33	50	50	ENSMUST00000112476.8	ENSMUSG00000004267.17	Eno2	chr6	protein_coding	enolase 2, gamma neuronal
chr6	124745300	124746212	-	124745300	124746400	A5SS	0.5	50	50	ENSMUST00000112476.8	ENSMUSG00000004267.17	Eno2	chr6	protein_coding	enolase 2, gamma neuronal
chr6	124743290	124743996	-	124743290;124743627	124743494;124743996	ES	0.33	50	50	ENSMUST00000004378.15	ENSMUSG00000004267.17	Eno2	chr6	protein_coding	enolase 2, gamma neuronal
chr6	124745683	124746400	-	124745297	124746400	A3SS	0.33	50	50	ENSMUST00000204896.3	ENSMUSG00000004267.17	Eno2	chr6	protein_coding	enolase 2, gamma neuronal
chr6	124740887	124743996	-	124740887	124743068	A5SS&ES	0.5	50	50	ENSMUST00000204896.3	ENSMUSG00000004267.17	Eno2	chr6	protein_coding	enolase 2, gamma neuronal
chr6	124743290	124743996	-	124743290	124743494	A5SS&ES	0.5	50	50	ENSMUST00000204896.3	ENSMUSG00000004267.17	Eno2	chr6	protein_coding	enolase 2, gamma neuronal
chr6	124743627	124743996	-	124743627	124744664	A5SS	0.5	50	50	ENSMUST00000204896.3	ENSMUSG00000004267.17	Eno2	chr6	protein_coding	enolase 2, gamma neuronal
chr6	124744759	124745150	-	124744759	124745061	A5SS	0.33	50	50	ENSMUST00000138770.8	ENSMUSG00000004267.17	Eno2	chr6	protein_coding	enolase 2, gamma neuronal
chr6	124740887	124743996	-	124743290	124743996	3pMXE	0.33	50	50	ENSMUST00000127274.8	ENSMUSG00000004267.17	Eno2	chr6	protein_coding	enolase 2, gamma neuronal
chr6	124743290;124743627	124743494;124744664	-	124743290;124744561	124743996;124744664	MXE	0.5	100	100	ENSMUST00000127274.8	ENSMUSG00000004267.17	Eno2	chr6	protein_coding	enolase 2, gamma neuronal
chr6	124756109	124756613	-	124756138	124756613	A3SS	0.5	50	50	ENSMUST00000032218.10	ENSMUSG00000030125.12	Lrrc23	chr6	protein_coding	leucine rich repeat containing 23
chr6	124756138	124756486	-	124756138	124756613	A5SS	0.5	50	50	ENSMUST00000032218.10	ENSMUSG00000030125.12	Lrrc23	chr6	protein_coding	leucine rich repeat containing 23
chr6	124785918	124786190	+	124785742	124786190	A5SS	0.25	50	50	ENSMUST00000047760.10	ENSMUSG00000038451.14	Spsb2	chr6	protein_coding	splA/ryanodine receptor domain and SOCS box containing 2
chr6	124785945	124786190	+	124785742	124786190	A5SS	0.25	50	50	ENSMUST00000047760.10	ENSMUSG00000038451.14	Spsb2	chr6	protein_coding	splA/ryanodine receptor domain and SOCS box containing 2
chr6	124785993	124786190	+	124785742	124786190	A5SS	0.25	50	50	ENSMUST00000047760.10	ENSMUSG00000038451.14	Spsb2	chr6	protein_coding	splA/ryanodine receptor domain and SOCS box containing 2
chr6	124785945	124786190	+	124785918	124786190	A5SS	0.25	50	50	ENSMUST00000143040.8	ENSMUSG00000038451.14	Spsb2	chr6	protein_coding	splA/ryanodine receptor domain and SOCS box containing 2
chr6	124785993	124786190	+	124785918	124786190	A5SS	0.25	50	50	ENSMUST00000143040.8	ENSMUSG00000038451.14	Spsb2	chr6	protein_coding	splA/ryanodine receptor domain and SOCS box containing 2
chr6	124785945	124786190	+	124785993	124786190	A5SS	0.25	50	50	ENSMUST00000052727.5	ENSMUSG00000038451.14	Spsb2	chr6	protein_coding	splA/ryanodine receptor domain and SOCS box containing 2
chr6	124799982	124800416	-	124799682	124800416	A3SS	0.5	50	50	ENSMUST00000047510.10	ENSMUSG00000038429.11	Usp5	chr6	protein_coding	ubiquitin specific peptidase 5 (isopeptidase T)
chr6	124801610	124801815	-	124801664	124801815	A3SS	0.5	50	50	ENSMUST00000047510.10	ENSMUSG00000038429.11	Usp5	chr6	protein_coding	ubiquitin specific peptidase 5 (isopeptidase T)
chr6	124794994	124795507	-	124794994	124795438	A5SS	0.5	50	50	ENSMUST00000047510.10	ENSMUSG00000038429.11	Usp5	chr6	protein_coding	ubiquitin specific peptidase 5 (isopeptidase T)
chr6	124803387	124804978	-	124803387	124806248	A5SS	0.5	50	50	ENSMUST00000047510.10	ENSMUSG00000038429.11	Usp5	chr6	protein_coding	ubiquitin specific peptidase 5 (isopeptidase T)
chr6	124807236	124807466	+	124806602	124807466	A5SS	0.33	50	50	ENSMUST00000150120.8	ENSMUSG00000023505.14	Cdca3	chr6	protein_coding	cell division cycle associated 3
chr6	124807380	124807466	+	124806602	124807466	A5SS	0.33	50	50	ENSMUST00000150120.8	ENSMUSG00000023505.14	Cdca3	chr6	protein_coding	cell division cycle associated 3
chr6	124807236;124807380	124807327;124807466	+	124807236	124807466	cassetteExon	0.5	100	100	ENSMUST00000024270.14	ENSMUSG00000023505.14	Cdca3	chr6	protein_coding	cell division cycle associated 3
chr6	124807236	124807466	+	124807236	124807327	A3SS	0.5	50	50	ENSMUST00000131847.8	ENSMUSG00000023505.14	Cdca3	chr6	protein_coding	cell division cycle associated 3
chr6	124807236	124807466	+	124807380	124807466	5pMXE	0.33	50	50	ENSMUST00000136692.2	ENSMUSG00000023505.14	Cdca3	chr6	protein_coding	cell division cycle associated 3
chr6	124811921	124812539	-	124811746	124812539	A3SS	0.5	50	50	ENSMUST00000024206.6	ENSMUSG00000023439.12	Gnb3	chr6	protein_coding	guanine nucleotide binding protein (G protein), beta 3
chr6	124812755	124813176	-	124812755	124813888	A5SS	0.5	50	50	ENSMUST00000024206.6	ENSMUSG00000023439.12	Gnb3	chr6	protein_coding	guanine nucleotide binding protein (G protein), beta 3
chr6	124827946	124828042	-	124827948	124828042	A3SS	0.5	50	50	ENSMUST00000023958.10	ENSMUSG00000023191.10	P3h3	chr6	protein_coding	prolyl 3-hydroxylase 3
chr6	124831415	124831811	-	124831410	124831811	A3SS	0.5	50	50	ENSMUST00000023958.10	ENSMUSG00000023191.10	P3h3	chr6	protein_coding	prolyl 3-hydroxylase 3
chr6	124839085;124839923	124839872;124840634	-	124839085	124840634	cassetteExon	0.5	100	100	ENSMUST00000046893.10	ENSMUSG00000038390.12	Gpr162	chr6	protein_coding	G protein-coupled receptor 162
chr6	124839085;124839988	124839872;124840634	-	124839085	124840634	cassetteExon	0.5	100	100	ENSMUST00000046893.10	ENSMUSG00000038390.12	Gpr162	chr6	protein_coding	G protein-coupled receptor 162
chr6	124839923	124840634	-	124839988	124840634	A3SS	0.33	50	50	ENSMUST00000204161.3	ENSMUSG00000038390.12	Gpr162	chr6	protein_coding	G protein-coupled receptor 162
chr6	124843634	124844628	-	124843634;124844090	124843972;124844628	ES	0.5	50	50	ENSMUST00000024044.7	ENSMUSG00000023274.15	Cd4	chr6	protein_coding	CD4 antigen
chr6	124843716	124843972	-	124843634	124843972	A3SS	0.5	50	50	ENSMUST00000024044.7	ENSMUSG00000023274.15	Cd4	chr6	protein_coding	CD4 antigen
chr6	124886452	124886907	-	124886452	124887067	A5SS	0.5	50	50	ENSMUST00000032217.2	ENSMUSG00000030124.3	Lag3	chr6	protein_coding	lymphocyte-activation gene 3
chr6	124891195	124891598	-	124891195;124891429	124891371;124891598	ES	0.5	50	50	ENSMUST00000032216.7	ENSMUSG00000030122.13	Ptms	chr6	protein_coding	parathymosin
chr6	124891952	124897002	-	124891952	124894523	5pMXE	0.33	50	50	ENSMUST00000032216.7	ENSMUSG00000030122.13	Ptms	chr6	protein_coding	parathymosin
chr6	124891952	124892323	-	124891952	124894523	A5SS	0.33	50	50	ENSMUST00000032216.7	ENSMUSG00000030122.13	Ptms	chr6	protein_coding	parathymosin
chr6	124891952	124892323	-	124891952	124897002	A5SS	0.33	50	50	ENSMUST00000204671.3	ENSMUSG00000030122.13	Ptms	chr6	protein_coding	parathymosin
chr6	124908549	124909374	+	124908549;124909184	124909062;124909374	ES	0.33	50	50	ENSMUST00000204177.3	ENSMUSG00000030120.15	Mlf2	chr6	protein_coding	myeloid leukemia factor 2
chr6	124909139	124909374	+	124909184	124909374	A5SS	0.33	50	50	ENSMUST00000204177.3	ENSMUSG00000030120.15	Mlf2	chr6	protein_coding	myeloid leukemia factor 2
chr6	124908549	124909374	+	124908549	124909062	A3SS	0.5	50	50	ENSMUST00000204815.3	ENSMUSG00000030120.15	Mlf2	chr6	protein_coding	myeloid leukemia factor 2
chr6	124908549;124909139	124909062;124909374	+	124908549	124909374	cassetteExon	0.5	100	100	ENSMUST00000203021.3	ENSMUSG00000030120.15	Mlf2	chr6	protein_coding	myeloid leukemia factor 2
chr6	124912408	124912565	+	124912408	124912586	A3SS	0.5	50	50	ENSMUST00000180095.4	ENSMUSG00000030120.15	Mlf2	chr6	protein_coding	myeloid leukemia factor 2
chr6	124908549	124909374	+	124909139	124909374	5pMXE	0.33	50	50	ENSMUST00000203133.2	ENSMUSG00000030120.15	Mlf2	chr6	protein_coding	myeloid leukemia factor 2
chr6	124936600	124936762	-	124935735	124936762	A3SS	0.5	50	50	ENSMUST00000112439.9	ENSMUSG00000030127.16	Cops7a	chr6	protein_coding	COP9 signalosome subunit 7A
chr6	124941891	124942124	-	124941891	124942365	A5SS	0.2	50	50	ENSMUST00000112439.9	ENSMUSG00000030127.16	Cops7a	chr6	protein_coding	COP9 signalosome subunit 7A
chr6	124941891	124942182	-	124941891	124942365	A5SS	0.2	50	50	ENSMUST00000112439.9	ENSMUSG00000030127.16	Cops7a	chr6	protein_coding	COP9 signalosome subunit 7A
chr6	124941891	124942248	-	124941891	124942365	A5SS	0.2	50	50	ENSMUST00000112439.9	ENSMUSG00000030127.16	Cops7a	chr6	protein_coding	COP9 signalosome subunit 7A
chr6	124941891	124942337	-	124941891	124942365	A5SS	0.2	50	50	ENSMUST00000112439.9	ENSMUSG00000030127.16	Cops7a	chr6	protein_coding	COP9 signalosome subunit 7A
chr6	124941891	124942124	-	124941891	124942248	A5SS	0.2	50	50	ENSMUST00000032220.15	ENSMUSG00000030127.16	Cops7a	chr6	protein_coding	COP9 signalosome subunit 7A
chr6	124941891	124942182	-	124941891	124942248	A5SS	0.2	50	50	ENSMUST00000032220.15	ENSMUSG00000030127.16	Cops7a	chr6	protein_coding	COP9 signalosome subunit 7A
chr6	124941891	124942337	-	124941891	124942248	A5SS	0.2	50	50	ENSMUST00000032220.15	ENSMUSG00000030127.16	Cops7a	chr6	protein_coding	COP9 signalosome subunit 7A
chr6	124941891	124942337	-	124941891	124942182	5pMXE	0.2	50	50	ENSMUST00000129976.8	ENSMUSG00000030127.16	Cops7a	chr6	protein_coding	COP9 signalosome subunit 7A
chr6	124941891	124942124	-	124941891	124942182	A5SS	0.2	50	50	ENSMUST00000129976.8	ENSMUSG00000030127.16	Cops7a	chr6	protein_coding	COP9 signalosome subunit 7A
chr6	124941891	124942124	-	124941891	124942337	A5SS	0.2	50	50	ENSMUST00000129446.8	ENSMUSG00000030127.16	Cops7a	chr6	protein_coding	COP9 signalosome subunit 7A
chr6	124977698	124977967	+	124977698	124978390	A3SS	0.5	50	50	ENSMUST00000032479.11	ENSMUSG00000030329.12	Pianp	chr6	protein_coding	PILR alpha associated neural protein
chr6	124974164	124975881	+	124973902	124975881	A5SS	0.2	50	50	ENSMUST00000032479.11	ENSMUSG00000030329.12	Pianp	chr6	protein_coding	PILR alpha associated neural protein
chr6	124975448	124975881	+	124973902	124975881	A5SS	0.2	50	50	ENSMUST00000032479.11	ENSMUSG00000030329.12	Pianp	chr6	protein_coding	PILR alpha associated neural protein
chr6	124975631	124975881	+	124973902	124975881	A5SS	0.2	50	50	ENSMUST00000032479.11	ENSMUSG00000030329.12	Pianp	chr6	protein_coding	PILR alpha associated neural protein
chr6	124975637	124975881	+	124973902	124975881	A5SS	0.2	50	50	ENSMUST00000032479.11	ENSMUSG00000030329.12	Pianp	chr6	protein_coding	PILR alpha associated neural protein
chr6	124975448	124975881	+	124974164	124975881	A5SS	0.2	50	50	ENSMUST00000159391.8	ENSMUSG00000030329.12	Pianp	chr6	protein_coding	PILR alpha associated neural protein
chr6	124975631	124975881	+	124974164	124975881	A5SS	0.2	50	50	ENSMUST00000159391.8	ENSMUSG00000030329.12	Pianp	chr6	protein_coding	PILR alpha associated neural protein
chr6	124975637	124975881	+	124974164	124975881	A5SS	0.2	50	50	ENSMUST00000159391.8	ENSMUSG00000030329.12	Pianp	chr6	protein_coding	PILR alpha associated neural protein
chr6	124975631	124975881	+	124975448	124975881	A5SS	0.2	50	50	ENSMUST00000162170.8	ENSMUSG00000030329.12	Pianp	chr6	protein_coding	PILR alpha associated neural protein
chr6	124975637	124975881	+	124975448	124975881	A5SS	0.2	50	50	ENSMUST00000162170.8	ENSMUSG00000030329.12	Pianp	chr6	protein_coding	PILR alpha associated neural protein
chr6	124975631	124975881	+	124975637	124975881	A5SS	0.2	50	50	ENSMUST00000160704.8	ENSMUSG00000030329.12	Pianp	chr6	protein_coding	PILR alpha associated neural protein
chr6	125002045;125002903	125002811;125007761	+	125002045	125007761	cassetteExon	0.5	100	100	ENSMUST00000132863.8	ENSMUSG00000038346.19	Zfp384	chr6	protein_coding	zinc finger protein 384
chr6	125002045;125003282	125002811;125007761	+	125002045	125007761	cassetteExon	0.5	100	100	ENSMUST00000132863.8	ENSMUSG00000038346.19	Zfp384	chr6	protein_coding	zinc finger protein 384
chr6	125007985;125008816	125008634;125010203	+	125007985	125010203	cassetteExon	0.5	100	100	ENSMUST00000132863.8	ENSMUSG00000038346.19	Zfp384	chr6	protein_coding	zinc finger protein 384
chr6	125007985	125008217	+	125007985	125010203	A3SS	0.33	50	50	ENSMUST00000132863.8	ENSMUSG00000038346.19	Zfp384	chr6	protein_coding	zinc finger protein 384
chr6	124986462	124987344	+	124986208	124987344	A5SS	0.25	50	50	ENSMUST00000132863.8	ENSMUSG00000038346.19	Zfp384	chr6	protein_coding	zinc finger protein 384
chr6	124986840	124987344	+	124986208	124987344	A5SS	0.25	50	50	ENSMUST00000132863.8	ENSMUSG00000038346.19	Zfp384	chr6	protein_coding	zinc finger protein 384
chr6	124986864	124987344	+	124986208	124987344	A5SS	0.25	50	50	ENSMUST00000132863.8	ENSMUSG00000038346.19	Zfp384	chr6	protein_coding	zinc finger protein 384
chr6	125001233	125001709	+	125001515	125001709	A5SS	0.5	50	50	ENSMUST00000132863.8	ENSMUSG00000038346.19	Zfp384	chr6	protein_coding	zinc finger protein 384
chr6	125009575	125010203	+	125007985	125010203	A5SS	0.33	50	50	ENSMUST00000132863.8	ENSMUSG00000038346.19	Zfp384	chr6	protein_coding	zinc finger protein 384
chr6	125001233	125001377	+	125001233	125001826	A3SS	0.2	50	50	ENSMUST00000054553.11	ENSMUSG00000038346.19	Zfp384	chr6	protein_coding	zinc finger protein 384
chr6	125001233	125001468	+	125001233	125001826	A3SS	0.2	50	50	ENSMUST00000054553.11	ENSMUSG00000038346.19	Zfp384	chr6	protein_coding	zinc finger protein 384
chr6	125001233	125001709	+	125001233	125001826	A3SS	0.2	50	50	ENSMUST00000054553.11	ENSMUSG00000038346.19	Zfp384	chr6	protein_coding	zinc finger protein 384
chr6	125001233	125001805	+	125001233	125001826	A3SS	0.2	50	50	ENSMUST00000054553.11	ENSMUSG00000038346.19	Zfp384	chr6	protein_coding	zinc finger protein 384
chr6	125001233	125001709	+	125001233;125001515	125001468;125001709	ES	0.5	50	50	ENSMUST00000145138.8	ENSMUSG00000038346.19	Zfp384	chr6	protein_coding	zinc finger protein 384
chr6	125007985	125010203	+	125007985;125009575	125008634;125010203	ES	0.33	50	50	ENSMUST00000145138.8	ENSMUSG00000038346.19	Zfp384	chr6	protein_coding	zinc finger protein 384
chr6	125002903;125003282	125003220;125007761	+	125002903	125007761	cassetteExon	0.5	100	100	ENSMUST00000145138.8	ENSMUSG00000038346.19	Zfp384	chr6	protein_coding	zinc finger protein 384
chr6	125007985;125008340	125008217;125008634	+	125007985	125008634	cassetteExon	0.5	100	100	ENSMUST00000145138.8	ENSMUSG00000038346.19	Zfp384	chr6	protein_coding	zinc finger protein 384
chr6	125001233	125001377	+	125001233	125001468	A3SS	0.2	50	50	ENSMUST00000145138.8	ENSMUSG00000038346.19	Zfp384	chr6	protein_coding	zinc finger protein 384
chr6	125001233	125001805	+	125001233	125001468	A3SS&ES	0.2	50	50	ENSMUST00000145138.8	ENSMUSG00000038346.19	Zfp384	chr6	protein_coding	zinc finger protein 384
chr6	125008816	125010203	+	125009575	125010203	A5SS	0.33	50	50	ENSMUST00000145138.8	ENSMUSG00000038346.19	Zfp384	chr6	protein_coding	zinc finger protein 384
chr6	124986840	124987344	+	124986462	124987344	A5SS	0.25	50	50	ENSMUST00000112428.8	ENSMUSG00000038346.19	Zfp384	chr6	protein_coding	zinc finger protein 384
chr6	124986864	124987344	+	124986462	124987344	A5SS	0.25	50	50	ENSMUST00000112428.8	ENSMUSG00000038346.19	Zfp384	chr6	protein_coding	zinc finger protein 384
chr6	125007985	125010203	+	125007985	125008634	3pMXE	0.33	50	50	ENSMUST00000144308.8	ENSMUSG00000038346.19	Zfp384	chr6	protein_coding	zinc finger protein 384
chr6	124986840	124987344	+	124986864	124987344	A5SS	0.25	50	50	ENSMUST00000046064.17	ENSMUSG00000038346.19	Zfp384	chr6	protein_coding	zinc finger protein 384
chr6	125001233	125001709	+	125001233;125001515	125001377;125001709	ES	0.5	50	50	ENSMUST00000131555.8	ENSMUSG00000038346.19	Zfp384	chr6	protein_coding	zinc finger protein 384
chr6	125001233	125001377	+	125001233	125001805	A3SS	0.2	50	50	ENSMUST00000152752.8	ENSMUSG00000038346.19	Zfp384	chr6	protein_coding	zinc finger protein 384
chr6	125001233	125001709	+	125001233	125001805	A3SS	0.2	50	50	ENSMUST00000152752.8	ENSMUSG00000038346.19	Zfp384	chr6	protein_coding	zinc finger protein 384
chr6	125007985	125010203	+	125008816	125010203	A5SS	0.33	50	50	ENSMUST00000137325.2	ENSMUSG00000038346.19	Zfp384	chr6	protein_coding	zinc finger protein 384
chr6	125024288	125024445	+	125024288	125024442	A3SS	0.5	50	50	ENSMUST00000140131.8	ENSMUSG00000030330.16	Ing4	chr6	protein_coding	inhibitor of growth family, member 4
chr6	125024550	125024865	+	125024550	125024756	A3SS	0.5	50	50	ENSMUST00000140131.8	ENSMUSG00000030330.16	Ing4	chr6	protein_coding	inhibitor of growth family, member 4
chr6	125024279	125024445	+	125024288	125024445	A5SS	0.5	50	50	ENSMUST00000032480.14	ENSMUSG00000030330.16	Ing4	chr6	protein_coding	inhibitor of growth family, member 4
chr6	125027904	125028206	+	125027904	125028324	A3SS	0.5	50	50	ENSMUST00000203287.3	ENSMUSG00000108037.3	Gm44597	chr6	lncRNA	predicted gene 44597
chr6	125028853	125030453	+	125028323	125030453	A5SS	0.5	50	50	ENSMUST00000112414.8	ENSMUSG00000072770.10	Acrbp	chr6	protein_coding	proacrosin binding protein
chr6	125048361	125058100	+	125044939	125058100	A5SS	0.5	50	50	ENSMUST00000088292.7	ENSMUSG00000067714.14	Lpar5	chr6	protein_coding	lysophosphatidic acid receptor 5
chr6	125077552	125077741	+	125077552	125077762	A3SS	0.5	50	50	ENSMUST00000112392.8	ENSMUSG00000063870.13	Chd4	chr6	protein_coding	chromodomain helicase DNA binding protein 4
chr6	125079261	125079395	+	125079261	125079434	A3SS	0.5	50	50	ENSMUST00000112392.8	ENSMUSG00000063870.13	Chd4	chr6	protein_coding	chromodomain helicase DNA binding protein 4
chr6	125128488	125130005	+	125128488;125129734	125129577;125130005	ES	0.5	50	50	ENSMUST00000119527.8	ENSMUSG00000038271.18	Iffo1	chr6	protein_coding	intermediate filament family orphan 1
chr6	125128488;125128766	125128758;125129577	+	125128488	125129577	cassetteExon	0.5	100	100	ENSMUST00000119527.8	ENSMUSG00000038271.18	Iffo1	chr6	protein_coding	intermediate filament family orphan 1
chr6	125128488;125128766	125128761;125129577	+	125128488	125129577	cassetteExon	0.5	100	100	ENSMUST00000119527.8	ENSMUSG00000038271.18	Iffo1	chr6	protein_coding	intermediate filament family orphan 1
chr6	125128488	125129407	+	125128488	125129577	A3SS	0.2	50	50	ENSMUST00000119527.8	ENSMUSG00000038271.18	Iffo1	chr6	protein_coding	intermediate filament family orphan 1
chr6	125130125	125130370	+	125130125	125130373	A3SS	0.5	50	50	ENSMUST00000119527.8	ENSMUSG00000038271.18	Iffo1	chr6	protein_coding	intermediate filament family orphan 1
chr6	125126145	125126552	+	125122992	125126552	A5SS	0.5	50	50	ENSMUST00000119527.8	ENSMUSG00000038271.18	Iffo1	chr6	protein_coding	intermediate filament family orphan 1
chr6	125128488	125130005	+	125128488;125129734	125129407;125130005	ES	0.5	50	50	ENSMUST00000144364.8	ENSMUSG00000038271.18	Iffo1	chr6	protein_coding	intermediate filament family orphan 1
chr6	125128488	125128758	+	125128488	125129407	A3SS	0.2	50	50	ENSMUST00000144364.8	ENSMUSG00000038271.18	Iffo1	chr6	protein_coding	intermediate filament family orphan 1
chr6	125128488	125128761	+	125128488	125129407	A3SS	0.2	50	50	ENSMUST00000144364.8	ENSMUSG00000038271.18	Iffo1	chr6	protein_coding	intermediate filament family orphan 1
chr6	125128488	125128758	+	125128488	125130005	A3SS	0.2	50	50	ENSMUST00000139071.8	ENSMUSG00000038271.18	Iffo1	chr6	protein_coding	intermediate filament family orphan 1
chr6	125128488	125128761	+	125128488	125130005	A3SS	0.2	50	50	ENSMUST00000139071.8	ENSMUSG00000038271.18	Iffo1	chr6	protein_coding	intermediate filament family orphan 1
chr6	125128488	125128761	+	125128488	125128758	A3SS	0.2	50	50	ENSMUST00000117675.8	ENSMUSG00000038271.18	Iffo1	chr6	protein_coding	intermediate filament family orphan 1
chr6	125128488	125130005	+	125128488;125129734	125128758;125130005	ES	0.5	50	50	ENSMUST00000135559.8	ENSMUSG00000038271.18	Iffo1	chr6	protein_coding	intermediate filament family orphan 1
chr6	125128488	125129577	+	125128488	125128758	A3SS	0.2	50	50	ENSMUST00000135559.8	ENSMUSG00000038271.18	Iffo1	chr6	protein_coding	intermediate filament family orphan 1
chr6	125128488	125130005	+	125128488	125129577	3pMXE	0.2	50	50	ENSMUST00000153006.2	ENSMUSG00000038271.18	Iffo1	chr6	protein_coding	intermediate filament family orphan 1
chr6	125140003	125140167	-	125140003	125140102	A5SS	0.5	50	50	ENSMUST00000117757.9	ENSMUSG00000057666.19	Gapdh	chr6	protein_coding	glyceraldehyde-3-phosphate dehydrogenase
chr6	125140399	125141816	-	125140399	125142234	A5SS	0.25	50	50	ENSMUST00000117757.9	ENSMUSG00000057666.19	Gapdh	chr6	protein_coding	glyceraldehyde-3-phosphate dehydrogenase
chr6	125140399	125142060	-	125140399	125142234	A5SS	0.25	50	50	ENSMUST00000117757.9	ENSMUSG00000057666.19	Gapdh	chr6	protein_coding	glyceraldehyde-3-phosphate dehydrogenase
chr6	125140399	125142118	-	125140399	125142234	A5SS	0.25	50	50	ENSMUST00000117757.9	ENSMUSG00000057666.19	Gapdh	chr6	protein_coding	glyceraldehyde-3-phosphate dehydrogenase
chr6	125142274	125142515	-	125142274	125143357	A5SS	0.5	50	50	ENSMUST00000117757.9	ENSMUSG00000057666.19	Gapdh	chr6	protein_coding	glyceraldehyde-3-phosphate dehydrogenase
chr6	125140399	125142060	-	125140399	125141816	5pMXE	0.25	50	50	ENSMUST00000144205.2	ENSMUSG00000057666.19	Gapdh	chr6	protein_coding	glyceraldehyde-3-phosphate dehydrogenase
chr6	125140399	125142118	-	125140399	125141816	5pMXE	0.25	50	50	ENSMUST00000144205.2	ENSMUSG00000057666.19	Gapdh	chr6	protein_coding	glyceraldehyde-3-phosphate dehydrogenase
chr6	125140399	125142060	-	125140399	125142118	A5SS	0.25	50	50	ENSMUST00000182052.8	ENSMUSG00000057666.19	Gapdh	chr6	protein_coding	glyceraldehyde-3-phosphate dehydrogenase
chr6	125150125	125150564	-	125150125;125150487	125150323;125150564	ES	0.5	50	50	ENSMUST00000043848.11	ENSMUSG00000038252.14	Ncapd2	chr6	protein_coding	non-SMC condensin I complex, subunit D2
chr6	125163224	125163717	-	125163244	125163717	A3SS	0.5	50	50	ENSMUST00000043848.11	ENSMUSG00000038252.14	Ncapd2	chr6	protein_coding	non-SMC condensin I complex, subunit D2
chr6	125166871	125168357	-	125166871	125168461	A5SS	0.5	50	50	ENSMUST00000043848.11	ENSMUSG00000038252.14	Ncapd2	chr6	protein_coding	non-SMC condensin I complex, subunit D2
chr6	125150125	125150564	-	125150487	125150564	3pMXE	0.5	50	50	ENSMUST00000189706.7	ENSMUSG00000038252.14	Ncapd2	chr6	protein_coding	non-SMC condensin I complex, subunit D2
chr6	125169396	125169479	+	125169171	125169479	A5SS	0.5	50	50	ENSMUST00000136804.2	ENSMUSG00000030335.7	Mrpl51	chr6	protein_coding	mitochondrial ribosomal protein L51
chr6	125196600	125217298	+	125196600	125197013	3pMXE	0.33	50	50	ENSMUST00000032487.14	ENSMUSG00000030337.17	Vamp1	chr6	protein_coding	vesicle-associated membrane protein 1
chr6	125196600	125198541	+	125196600	125197013	A3SS	0.33	50	50	ENSMUST00000032487.14	ENSMUSG00000030337.17	Vamp1	chr6	protein_coding	vesicle-associated membrane protein 1
chr6	125196600	125198541	+	125196600	125217298	A3SS	0.33	50	50	ENSMUST00000063588.11	ENSMUSG00000030337.17	Vamp1	chr6	protein_coding	vesicle-associated membrane protein 1
chr6	125208317	125217298	+	125196600	125217298	A5SS	0.5	50	50	ENSMUST00000063588.11	ENSMUSG00000030337.17	Vamp1	chr6	protein_coding	vesicle-associated membrane protein 1
chr6	125208317	125217298	+	125208317	125215624	3pMXE	0.5	50	50	ENSMUST00000160523.8	ENSMUSG00000030337.17	Vamp1	chr6	protein_coding	vesicle-associated membrane protein 1
chr6	125211279	125213436	-	125211279;125211657	125211478;125213436	ES	0.5	50	50	ENSMUST00000032486.13	ENSMUSG00000030336.15	Cd27	chr6	protein_coding	CD27 antigen
chr6	125211279	125213720	-	125211279;125213567	125213436;125213720	ES	0.5	50	50	ENSMUST00000112281.8	ENSMUSG00000030336.15	Cd27	chr6	protein_coding	CD27 antigen
chr6	125211279	125211478	-	125211279	125213720	A5SS	0.33	50	50	ENSMUST00000112282.3	ENSMUSG00000030336.15	Cd27	chr6	protein_coding	CD27 antigen
chr6	125211279	125213436	-	125211279	125211478	5pMXE	0.33	50	50	ENSMUST00000135205.2	ENSMUSG00000030336.15	Cd27	chr6	protein_coding	CD27 antigen
chr6	125211279	125213720	-	125213567	125213720	3pMXE	0.5	50	50	ENSMUST00000152650.2	ENSMUSG00000030336.15	Cd27	chr6	protein_coding	CD27 antigen
chr6	125243489	125247286	+	125243489	125245815	A3SS	0.5	50	50	ENSMUST00000204911.3	ENSMUSG00000108129.3	4930417O13Rik	chr6	lncRNA	RIKEN cDNA 4930417O13 gene
chr6	125247376	125247605	+	125247376	125262583	A3SS	0.33	50	50	ENSMUST00000204911.3	ENSMUSG00000108129.3	4930417O13Rik	chr6	lncRNA	RIKEN cDNA 4930417O13 gene
chr6	125247376	125250411	+	125247376	125262583	A3SS	0.33	50	50	ENSMUST00000204911.3	ENSMUSG00000108129.3	4930417O13Rik	chr6	lncRNA	RIKEN cDNA 4930417O13 gene
chr6	125243032	125243363	+	125242540	125243363	A5SS	0.5	50	50	ENSMUST00000204911.3	ENSMUSG00000108129.3	4930417O13Rik	chr6	lncRNA	RIKEN cDNA 4930417O13 gene
chr6	125247376	125250411	+	125247376	125247605	3pMXE	0.33	50	50	ENSMUST00000203841.3	ENSMUSG00000108129.3	4930417O13Rik	chr6	lncRNA	RIKEN cDNA 4930417O13 gene
chr6	125308147	125314760	+	125308147;125309246	125309056;125314760	ES	0.5	50	50	ENSMUST00000176655.8	ENSMUSG00000030340.17	Scnn1a	chr6	protein_coding	sodium channel, nonvoltage-gated 1 alpha
chr6	125298254	125298916	+	125298254	125298977	A3SS	0.33	50	50	ENSMUST00000176655.8	ENSMUSG00000030340.17	Scnn1a	chr6	protein_coding	sodium channel, nonvoltage-gated 1 alpha
chr6	125298254	125298928	+	125298254	125298977	A3SS	0.33	50	50	ENSMUST00000176655.8	ENSMUSG00000030340.17	Scnn1a	chr6	protein_coding	sodium channel, nonvoltage-gated 1 alpha
chr6	125298735	125298977	+	125298254	125298977	A5SS	0.5	50	50	ENSMUST00000176655.8	ENSMUSG00000030340.17	Scnn1a	chr6	protein_coding	sodium channel, nonvoltage-gated 1 alpha
chr6	125298254	125298928	+	125298254	125298916	A3SS	0.33	50	50	ENSMUST00000176110.8	ENSMUSG00000030340.17	Scnn1a	chr6	protein_coding	sodium channel, nonvoltage-gated 1 alpha
chr6	125298735	125298916	+	125298254	125298916	A5SS	0.5	50	50	ENSMUST00000176110.8	ENSMUSG00000030340.17	Scnn1a	chr6	protein_coding	sodium channel, nonvoltage-gated 1 alpha
chr6	125298735	125298916	+	125298735	125298977	A3SS	0.5	50	50	ENSMUST00000176442.8	ENSMUSG00000030340.17	Scnn1a	chr6	protein_coding	sodium channel, nonvoltage-gated 1 alpha
chr6	125326471	125326852	+	125326427	125326852	A5SS	0.5	50	50	ENSMUST00000131434.2	ENSMUSG00000030341.18	Tnfrsf1a	chr6	protein_coding	tumor necrosis factor receptor superfamily, member 1a
chr6	125335095;125335354	125335239;125337460	+	125335095	125337460	cassetteExon	0.5	100	100	ENSMUST00000032491.15	ENSMUSG00000030341.18	Tnfrsf1a	chr6	protein_coding	tumor necrosis factor receptor superfamily, member 1a
chr6	125449474	125451696	-	125449474	125471537	A5SS	0.5	50	50	ENSMUST00000032492.9	ENSMUSG00000030342.9	Cd9	chr6	protein_coding	CD9 antigen
chr6	125459021	125459527	+	125458437	125459527	A5SS	0.5	50	50	ENSMUST00000187542.7	ENSMUSG00000101191.7	Gm28809	chr6	lncRNA	predicted gene 28809
chr6	125471566	125472727	+	125471566	125483762	A3SS	0.5	50	50	ENSMUST00000203423.2	ENSMUSG00000101162.3	Gm26728	chr6	lncRNA	predicted gene, 26728
chr6	125547587	125555145	+	125547587	125565380	A3SS	0.5	50	50	ENSMUST00000100941.9	ENSMUSG00000001930.18	Vwf	chr6	protein_coding	Von Willebrand factor
chr6	125530162	125531416	+	125523992	125531416	A5SS	0.5	50	50	ENSMUST00000100941.9	ENSMUSG00000001930.18	Vwf	chr6	protein_coding	Von Willebrand factor
chr6	125580852	125581093	+	125580482	125581093	A5SS	0.5	50	50	ENSMUST00000112254.8	ENSMUSG00000001930.18	Vwf	chr6	protein_coding	Von Willebrand factor
chr6	125634231	125635679	+	125634304	125635679	A5SS	0.5	50	50	ENSMUST00000112254.8	ENSMUSG00000001930.18	Vwf	chr6	protein_coding	Von Willebrand factor
chr6	125849713	125857609	+	125849713;125857395	125857384;125857609	ES	0.5	50	50	ENSMUST00000159111.8	ENSMUSG00000038115.17	Ano2	chr6	protein_coding	anoctamin 2
chr6	125857716;125880072	125879988;125932662	+	125857716	125932662	cassetteExon	0.5	100	100	ENSMUST00000159111.8	ENSMUSG00000038115.17	Ano2	chr6	protein_coding	anoctamin 2
chr6	125688564	125689084	+	125687703	125689084	A5SS	0.5	50	50	ENSMUST00000159111.8	ENSMUSG00000038115.17	Ano2	chr6	protein_coding	anoctamin 2
chr6	125857716	125932662	+	125857716	125879988	3pMXE	0.5	50	50	ENSMUST00000160317.2	ENSMUSG00000038115.17	Ano2	chr6	protein_coding	anoctamin 2
chr6	126079486	126143503	-	126079486	126141693	5pMXE	0.5	50	50	ENSMUST00000204542.3	ENSMUSG00000049107.14	Ntf3	chr6	protein_coding	neurotrophin 3
chr6	126079486	126143503	-	126079486;126141803	126141693;126143503	ES	0.5	50	50	ENSMUST00000112244.8	ENSMUSG00000049107.14	Ntf3	chr6	protein_coding	neurotrophin 3
chr6	126685670;126704548	126704443;126712178	-	126685670	126712178	cassetteExon	0.5	100	100	ENSMUST00000040751.6	ENSMUSG00000038077.8	Kcna6	chr6	protein_coding	potassium voltage-gated channel, shaker-related, subfamily, member 6
chr6	126776750	126778596	-	126776750;126777826	126777633;126778596	ES	0.5	50	50	ENSMUST00000238666.2	ENSMUSG00000118420.2	Gm29788	chr6	transcribed_unitary_pseudogene	predicted gene, 29788
chr6	126821992	126826027	-	126821924	126826027	A3SS	0.5	50	50	ENSMUST00000205002.3	ENSMUSG00000000399.11	Ndufa9	chr6	protein_coding	NADH:ubiquinone oxidoreductase subunit A9
chr6	126830132	126833017	+	126830213	126833017	A5SS	0.5	50	50	ENSMUST00000095440.9	ENSMUSG00000030344.12	Akap3	chr6	protein_coding	A kinase (PRKA) anchor protein 3
chr6	126830213	126837218	+	126834174	126837218	A5SS&ES	0.5	50	50	ENSMUST00000202878.4	ENSMUSG00000030344.12	Akap3	chr6	protein_coding	A kinase (PRKA) anchor protein 3
chr6	126830213	126833017	+	126830213	126837218	A3SS	0.5	50	50	ENSMUST00000202574.2	ENSMUSG00000030344.12	Akap3	chr6	protein_coding	A kinase (PRKA) anchor protein 3
chr6	126857317	126862192	-	126857317;126861050	126860990;126862192	ES	0.5	50	50	ENSMUST00000078521.7	ENSMUSG00000030345.17	Dyrk4	chr6	protein_coding	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4
chr6	126854301	126857197	-	126854301	126857188	A5SS	0.5	50	50	ENSMUST00000078521.7	ENSMUSG00000030345.17	Dyrk4	chr6	protein_coding	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4
chr6	126876843	126884237	-	126876843	126893249	A5SS	0.5	50	50	ENSMUST00000078521.7	ENSMUSG00000030345.17	Dyrk4	chr6	protein_coding	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4
chr6	126904653	126905104	-	126904650	126905104	A3SS	0.5	50	50	ENSMUST00000112220.8	ENSMUSG00000030346.17	Rad51ap1	chr6	protein_coding	RAD51 associated protein 1
chr6	126905123	126911677	-	126907065	126911677	A3SS&ES	0.5	50	50	ENSMUST00000112220.8	ENSMUSG00000030346.17	Rad51ap1	chr6	protein_coding	RAD51 associated protein 1
chr6	126902030	126902516	-	126902030	126903322	A5SS	0.5	50	50	ENSMUST00000112220.8	ENSMUSG00000030346.17	Rad51ap1	chr6	protein_coding	RAD51 associated protein 1
chr6	126907065	126911670	-	126907065	126911677	A5SS	0.5	50	50	ENSMUST00000112220.8	ENSMUSG00000030346.17	Rad51ap1	chr6	protein_coding	RAD51 associated protein 1
chr6	126912971	126916471	-	126912971	126916457	A5SS	0.5	50	50	ENSMUST00000112220.8	ENSMUSG00000030346.17	Rad51ap1	chr6	protein_coding	RAD51 associated protein 1
chr6	126917273	126919275	+	126916989	126919275	A5SS	0.5	50	50	ENSMUST00000202086.4	ENSMUSG00000030347.7	D6Wsu163e	chr6	protein_coding	DNA segment, Chr 6, Wayne State University 163, expressed
chr6	127069705	127086399	-	127069705;127078849	127078812;127086399	ES	0.5	50	50	ENSMUST00000039913.9	ENSMUSG00000038028.10	Tigar	chr6	protein_coding	Trp53 induced glycolysis regulatory phosphatase
chr6	127107548	127116066	-	127107450	127116066	A3SS	0.5	50	50	ENSMUST00000000188.12	ENSMUSG00000000184.13	Ccnd2	chr6	protein_coding	cyclin D2
chr6	127123145	127123556	-	127123145	127125627	A5SS	0.5	50	50	ENSMUST00000000188.12	ENSMUSG00000000184.13	Ccnd2	chr6	protein_coding	cyclin D2
chr6	127127763	127127830	-	127127763	127129125	A5SS	0.5	50	50	ENSMUST00000201902.4	ENSMUSG00000000184.13	Ccnd2	chr6	protein_coding	cyclin D2
chr6	127126781	127188463	+	127162537	127188463	A5SS&ES	0.5	50	50	ENSMUST00000180811.2	ENSMUSG00000097166.2	9330179D12Rik	chr6	lncRNA	RIKEN cDNA 9330179D12 gene
chr6	127447793	127451199	+	127423962	127451199	A5SS	0.33	50	50	ENSMUST00000112191.8	ENSMUSG00000037997.13	Parp11	chr6	protein_coding	poly (ADP-ribose) polymerase family, member 11
chr6	127448631	127451199	+	127423962	127451199	A5SS	0.33	50	50	ENSMUST00000112191.8	ENSMUSG00000037997.13	Parp11	chr6	protein_coding	poly (ADP-ribose) polymerase family, member 11
chr6	127447793	127451199	+	127447793;127448631	127448511;127451199	ES	0.5	50	50	ENSMUST00000112195.8	ENSMUSG00000037997.13	Parp11	chr6	protein_coding	poly (ADP-ribose) polymerase family, member 11
chr6	127445115	127447668	+	127445115	127447665	A3SS	0.5	50	50	ENSMUST00000112195.8	ENSMUSG00000037997.13	Parp11	chr6	protein_coding	poly (ADP-ribose) polymerase family, member 11
chr6	127430785	127444995	+	127426303	127444995	A5SS	0.5	50	50	ENSMUST00000112195.8	ENSMUSG00000037997.13	Parp11	chr6	protein_coding	poly (ADP-ribose) polymerase family, member 11
chr6	127447793	127451199	+	127447793	127448511	3pMXE	0.5	50	50	ENSMUST00000128470.8	ENSMUSG00000037997.13	Parp11	chr6	protein_coding	poly (ADP-ribose) polymerase family, member 11
chr6	127944235;128060444	128060345;128120477	-	127944235;128011208	128011129;128120477	MXE	0.5	100	100	ENSMUST00000112173.8	ENSMUSG00000030352.16	Tspan9	chr6	protein_coding	tetraspanin 9
chr6	128011208;128060444	128060345;128120477	-	128011208	128120477	cassetteExon	0.5	100	100	ENSMUST00000112173.8	ENSMUSG00000030352.16	Tspan9	chr6	protein_coding	tetraspanin 9
chr6	128011208	128011739	-	128011208	128120477	A5SS	0.25	50	50	ENSMUST00000112173.8	ENSMUSG00000030352.16	Tspan9	chr6	protein_coding	tetraspanin 9
chr6	128011208	128054990	-	128011208	128120477	A5SS	0.25	50	50	ENSMUST00000112173.8	ENSMUSG00000030352.16	Tspan9	chr6	protein_coding	tetraspanin 9
chr6	127944235	128060345	-	127944235;128011208	128011129;128060345	ES	0.25	50	50	ENSMUST00000112171.8	ENSMUSG00000030352.16	Tspan9	chr6	protein_coding	tetraspanin 9
chr6	128060444	128117663	-	128060444	128113552	5pMXE	0.25	50	50	ENSMUST00000112171.8	ENSMUSG00000030352.16	Tspan9	chr6	protein_coding	tetraspanin 9
chr6	128060444	128120477	-	128060444	128113552	5pMXE	0.25	50	50	ENSMUST00000112171.8	ENSMUSG00000030352.16	Tspan9	chr6	protein_coding	tetraspanin 9
chr6	128011208;128055089	128054990;128060345	-	128011208	128060345	cassetteExon	0.5	100	100	ENSMUST00000112171.8	ENSMUSG00000030352.16	Tspan9	chr6	protein_coding	tetraspanin 9
chr6	128058864	128060345	-	128011208	128060345	A3SS	0.25	50	50	ENSMUST00000112171.8	ENSMUSG00000030352.16	Tspan9	chr6	protein_coding	tetraspanin 9
chr6	128011208	128011739	-	128011208	128060345	A5SS	0.33	50	50	ENSMUST00000112171.8	ENSMUSG00000030352.16	Tspan9	chr6	protein_coding	tetraspanin 9
chr6	128060444	128101179	-	128060444	128113552	A5SS	0.25	50	50	ENSMUST00000112171.8	ENSMUSG00000030352.16	Tspan9	chr6	protein_coding	tetraspanin 9
chr6	128060444	128101179	-	128060444	128120477	A5SS	0.25	50	50	ENSMUST00000032503.12	ENSMUSG00000030352.16	Tspan9	chr6	protein_coding	tetraspanin 9
chr6	128060444	128117663	-	128060444	128120477	A5SS	0.25	50	50	ENSMUST00000032503.12	ENSMUSG00000030352.16	Tspan9	chr6	protein_coding	tetraspanin 9
chr6	127944235	128060345	-	127944235	128011129	5pMXE	0.5	50	50	ENSMUST00000123786.9	ENSMUSG00000030352.16	Tspan9	chr6	protein_coding	tetraspanin 9
chr6	128011208	128054990	-	128011208	128011739	5pMXE	0.25	50	50	ENSMUST00000202372.4	ENSMUSG00000030352.16	Tspan9	chr6	protein_coding	tetraspanin 9
chr6	128058864	128060345	-	128055089	128060345	A3SS	0.25	50	50	ENSMUST00000154375.8	ENSMUSG00000030352.16	Tspan9	chr6	protein_coding	tetraspanin 9
chr6	128060444	128101179	-	128060444	128117663	A5SS	0.25	50	50	ENSMUST00000146268.8	ENSMUSG00000030352.16	Tspan9	chr6	protein_coding	tetraspanin 9
chr6	128055089	128060345	-	127944235	128060345	A3SS	0.25	50	50	ENSMUST00000145940.8	ENSMUSG00000030352.16	Tspan9	chr6	protein_coding	tetraspanin 9
chr6	128058864	128060345	-	127944235	128060345	A3SS	0.25	50	50	ENSMUST00000145940.8	ENSMUSG00000030352.16	Tspan9	chr6	protein_coding	tetraspanin 9
chr6	128248085	128277258	-	128248085	128252415	5pMXE	0.33	50	50	ENSMUST00000130454.8	ENSMUSG00000030353.16	Tead4	chr6	protein_coding	TEA domain family member 4
chr6	128248085	128277498	-	128248085	128252415	5pMXE	0.33	50	50	ENSMUST00000130454.8	ENSMUSG00000030353.16	Tead4	chr6	protein_coding	TEA domain family member 4
chr6	128223824;128225051	128224923;128228503	-	128223824	128228503	cassetteExon	0.5	100	100	ENSMUST00000130454.8	ENSMUSG00000030353.16	Tead4	chr6	protein_coding	TEA domain family member 4
chr6	128248085	128277498	-	128248085	128277258	A5SS	0.33	50	50	ENSMUST00000006311.13	ENSMUSG00000030353.16	Tead4	chr6	protein_coding	TEA domain family member 4
chr6	128314748;128325169	128325086;128332701	-	128314748	128332701	cassetteExon	0.5	100	100	ENSMUST00000001562.9	ENSMUSG00000001521.13	Tulp3	chr6	protein_coding	tubby-like protein 3
chr6	128320168	128332701	-	128314748	128332701	A3SS	0.33	50	50	ENSMUST00000001562.9	ENSMUSG00000001521.13	Tulp3	chr6	protein_coding	tubby-like protein 3
chr6	128302041	128302387	-	128302041	128302840	A5SS	0.5	50	50	ENSMUST00000001562.9	ENSMUSG00000001521.13	Tulp3	chr6	protein_coding	tubby-like protein 3
chr6	128320168	128332701	-	128325169	128332701	A3SS&ES	0.33	50	50	ENSMUST00000133134.3	ENSMUSG00000001521.13	Tulp3	chr6	protein_coding	tubby-like protein 3
chr6	128336317	128339331	-	128336317;128339147	128339021;128339331	ES	0.5	50	50	ENSMUST00000112152.8	ENSMUSG00000048668.17	Rhno1	chr6	protein_coding	RAD9-HUS1-RAD1 interacting nuclear orphan 1
chr6	128339147	128339802	-	128339147	128339331	5pMXE	0.5	50	50	ENSMUST00000112152.8	ENSMUSG00000048668.17	Rhno1	chr6	protein_coding	RAD9-HUS1-RAD1 interacting nuclear orphan 1
chr6	128336317	128339310	-	128336317	128339021	A5SS&ES	0.33	50	50	ENSMUST00000112152.8	ENSMUSG00000048668.17	Rhno1	chr6	protein_coding	RAD9-HUS1-RAD1 interacting nuclear orphan 1
chr6	128336317	128339310	-	128336317	128339331	A5SS	0.25	50	50	ENSMUST00000057421.15	ENSMUSG00000048668.17	Rhno1	chr6	protein_coding	RAD9-HUS1-RAD1 interacting nuclear orphan 1
chr6	128336317	128339802	-	128336317	128339331	A5SS	0.25	50	50	ENSMUST00000057421.15	ENSMUSG00000048668.17	Rhno1	chr6	protein_coding	RAD9-HUS1-RAD1 interacting nuclear orphan 1
chr6	128336317;128339147	128339021;128339802	-	128336317	128339802	cassetteExon	0.5	100	100	ENSMUST00000112151.2	ENSMUSG00000048668.17	Rhno1	chr6	protein_coding	RAD9-HUS1-RAD1 interacting nuclear orphan 1
chr6	128336317	128339310	-	128336317	128339802	A5SS	0.25	50	50	ENSMUST00000112151.2	ENSMUSG00000048668.17	Rhno1	chr6	protein_coding	RAD9-HUS1-RAD1 interacting nuclear orphan 1
chr6	128336317	128339802	-	128339147	128339802	3pMXE	0.5	50	50	ENSMUST00000132604.2	ENSMUSG00000048668.17	Rhno1	chr6	protein_coding	RAD9-HUS1-RAD1 interacting nuclear orphan 1
chr6	128344401	128346257	+	128344401	128345443	3pMXE	0.5	50	50	ENSMUST00000123988.8	ENSMUSG00000001517.15	Foxm1	chr6	protein_coding	forkhead box M1
chr6	128348048	128349497	+	128348048;128348975	128348931;128349497	ES	0.5	50	50	ENSMUST00000073316.13	ENSMUSG00000001517.15	Foxm1	chr6	protein_coding	forkhead box M1
chr6	128348048	128349494	+	128348048	128348931	A3SS&ES	0.33	50	50	ENSMUST00000073316.13	ENSMUSG00000001517.15	Foxm1	chr6	protein_coding	forkhead box M1
chr6	128348975	128349494	+	128348975	128349497	A3SS	0.5	50	50	ENSMUST00000073316.13	ENSMUSG00000001517.15	Foxm1	chr6	protein_coding	forkhead box M1
chr6	128348048	128349494	+	128348048	128349497	A3SS	0.33	50	50	ENSMUST00000112148.4	ENSMUSG00000001517.15	Foxm1	chr6	protein_coding	forkhead box M1
chr6	128348048	128349494	+	128348048;128348975	128348931;128349494	ES	0.5	50	50	ENSMUST00000203040.3	ENSMUSG00000001517.15	Foxm1	chr6	protein_coding	forkhead box M1
chr6	128348048	128349497	+	128348048	128348931	A3SS&ES	0.33	50	50	ENSMUST00000203040.3	ENSMUSG00000001517.15	Foxm1	chr6	protein_coding	forkhead box M1
chr6	128356940	128361657	+	128356940	128360716	3pMXE	0.5	50	50	ENSMUST00000130785.4	ENSMUSG00000079304.6	Tex52	chr6	protein_coding	testis expressed 52
chr6	128352562	128356390	+	128352562	128377070	A3SS	0.5	50	50	ENSMUST00000204223.2	ENSMUSG00000108011.2	Gm44596	chr6	protein_coding	predicted gene 44596
chr6	128377264	128381894	+	128377264	128381898	A3SS	0.5	50	50	ENSMUST00000204223.2	ENSMUSG00000108011.2	Gm44596	chr6	protein_coding	predicted gene 44596
chr6	128376313	128377070	+	128352562	128377070	A5SS	0.5	50	50	ENSMUST00000204223.2	ENSMUSG00000108011.2	Gm44596	chr6	protein_coding	predicted gene 44596
chr6	128384701	128393236	+	128384701	128385168	3pMXE	0.33	50	50	ENSMUST00000123867.8	ENSMUSG00000001520.13	Nrip2	chr6	protein_coding	nuclear receptor interacting protein 2
chr6	128384701	128384947	+	128384701	128385168	A3SS	0.33	50	50	ENSMUST00000123867.8	ENSMUSG00000001520.13	Nrip2	chr6	protein_coding	nuclear receptor interacting protein 2
chr6	128384701	128393236	+	128384701	128384947	3pMXE	0.33	50	50	ENSMUST00000147155.8	ENSMUSG00000001520.13	Nrip2	chr6	protein_coding	nuclear receptor interacting protein 2
chr6	128391247	128393220	-	128391247;128393027	128392859;128393220	ES	0.5	50	50	ENSMUST00000001559.11	ENSMUSG00000001518.13	Itfg2	chr6	protein_coding	integrin alpha FG-GAP repeat containing 2
chr6	128393261	128401681	-	128393261;128394675	128394580;128401681	ES	0.5	50	50	ENSMUST00000001559.11	ENSMUSG00000001518.13	Itfg2	chr6	protein_coding	integrin alpha FG-GAP repeat containing 2
chr6	128391247	128392881	-	128391247	128392859	A5SS	0.33	50	50	ENSMUST00000001559.11	ENSMUSG00000001518.13	Itfg2	chr6	protein_coding	integrin alpha FG-GAP repeat containing 2
chr6	128391247;128393027	128392881;128393220	-	128391247	128393220	cassetteExon	0.5	100	100	ENSMUST00000203853.3	ENSMUSG00000001518.13	Itfg2	chr6	protein_coding	integrin alpha FG-GAP repeat containing 2
chr6	128393261	128401681	-	128394675	128401681	A3SS	0.5	50	50	ENSMUST00000133994.2	ENSMUSG00000001518.13	Itfg2	chr6	protein_coding	integrin alpha FG-GAP repeat containing 2
chr6	128413677	128414573	-	128413677	128415369	A5SS	0.33	50	50	ENSMUST00000139448.7	ENSMUSG00000030357.11	Fkbp4	chr6	protein_coding	FK506 binding protein 4
chr6	128413677	128415031	-	128413677	128415369	A5SS	0.33	50	50	ENSMUST00000139448.7	ENSMUSG00000030357.11	Fkbp4	chr6	protein_coding	FK506 binding protein 4
chr6	128413677	128414573	-	128413677	128415031	A5SS	0.33	50	50	ENSMUST00000150387.8	ENSMUSG00000030357.11	Fkbp4	chr6	protein_coding	FK506 binding protein 4
chr6	128416659	128465854	+	128416659	128449700	3pMXE	0.5	50	50	ENSMUST00000144745.4	ENSMUSG00000059659.8	Gm10069	chr6	lncRNA	predicted gene 10069
chr6	128451106	128465854	+	128416659	128465854	A5SS	0.5	50	50	ENSMUST00000204081.2	ENSMUSG00000059659.8	Gm10069	chr6	lncRNA	predicted gene 10069
chr6	128499147	128500740	-	128499147;128499723	128499703;128500740	ES	0.5	50	50	ENSMUST00000112132.8	ENSMUSG00000030359.15	Pzp	chr6	protein_coding	PZP, alpha-2-macroglobulin like
chr6	128464496	128464757	-	128464496	128464844	A5SS	0.5	50	50	ENSMUST00000112132.8	ENSMUSG00000030359.15	Pzp	chr6	protein_coding	PZP, alpha-2-macroglobulin like
chr6	128596137	128599694	-	128596137;128597313	128597215;128599694	ES	0.5	50	50	ENSMUST00000032512.15	ENSMUSG00000030361.17	Klrb1a	chr6	protein_coding	killer cell lectin-like receptor subfamily B member 1A
chr6	128595556	128596063	-	128595574	128596063	A3SS	0.33	50	50	ENSMUST00000032512.15	ENSMUSG00000030361.17	Klrb1a	chr6	protein_coding	killer cell lectin-like receptor subfamily B member 1A
chr6	128595565	128596063	-	128595574	128596063	A3SS	0.33	50	50	ENSMUST00000032512.15	ENSMUSG00000030361.17	Klrb1a	chr6	protein_coding	killer cell lectin-like receptor subfamily B member 1A
chr6	128595565	128596063	-	128595556	128596063	A3SS	0.33	50	50	ENSMUST00000203275.3	ENSMUSG00000030361.17	Klrb1a	chr6	protein_coding	killer cell lectin-like receptor subfamily B member 1A
chr6	128633567	128633869	-	128632973	128633869	A3SS	0.5	50	50	ENSMUST00000203658.2	ENSMUSG00000030363.9	Clec2j	chr6	unprocessed_pseudogene	C-type lectin domain family 2, member J
chr6	128651123;128651504	128651348;128651695	+	128651123	128651695	cassetteExon	0.5	100	100	ENSMUST00000032518.7	ENSMUSG00000030364.7	Clec2h	chr6	protein_coding	C-type lectin domain family 2, member h
chr6	128639495	128646585	+	128639495	128647744	A3SS	0.5	50	50	ENSMUST00000032518.7	ENSMUSG00000030364.7	Clec2h	chr6	protein_coding	C-type lectin domain family 2, member h
chr6	128651016	128651695	+	128651123	128651695	A5SS	0.33	50	50	ENSMUST00000032518.7	ENSMUSG00000030364.7	Clec2h	chr6	protein_coding	C-type lectin domain family 2, member h
chr6	128651016	128651695	+	128651504	128651695	A5SS&ES	0.33	50	50	ENSMUST00000205225.3	ENSMUSG00000030364.7	Clec2h	chr6	protein_coding	C-type lectin domain family 2, member h
chr6	128683594	128687010	-	128683594	128684691	5pMXE	0.5	50	50	ENSMUST00000203869.2	ENSMUSG00000079299.4	Klrb1	chr6	protein_coding	killer cell lectin-like receptor subfamily B member 1
chr6	128761204	128761700	-	128761213	128761700	A3SS	0.33	50	50	ENSMUST00000167691.9	ENSMUSG00000030325.17	Klrb1c	chr6	protein_coding	killer cell lectin-like receptor subfamily B member 1C
chr6	128761222	128761700	-	128761213	128761700	A3SS	0.33	50	50	ENSMUST00000167691.9	ENSMUSG00000030325.17	Klrb1c	chr6	protein_coding	killer cell lectin-like receptor subfamily B member 1C
chr6	128761204	128761700	-	128761222	128761700	A3SS	0.33	50	50	ENSMUST00000174404.8	ENSMUSG00000030325.17	Klrb1c	chr6	protein_coding	killer cell lectin-like receptor subfamily B member 1C
chr6	128797299	128803122	-	128797299;128798003	128797905;128803122	ES	0.5	50	50	ENSMUST00000204394.3	ENSMUSG00000107872.3	Gm44511	chr6	protein_coding	predicted gene 44511
chr6	128760742;128795958	128795876;128797228	-	128760742;128761222	128761068;128797228	MXE	0.5	100	100	ENSMUST00000204394.3	ENSMUSG00000107872.3	Gm44511	chr6	protein_coding	predicted gene 44511
chr6	128760742;128796030	128795876;128797228	-	128760742;128761222	128761068;128797228	MXE	0.5	100	100	ENSMUST00000204394.3	ENSMUSG00000107872.3	Gm44511	chr6	protein_coding	predicted gene 44511
chr6	128757389	128795436	-	128757389	128760627	A5SS&ES	0.5	50	50	ENSMUST00000204394.3	ENSMUSG00000107872.3	Gm44511	chr6	protein_coding	predicted gene 44511
chr6	128761222	128761700	-	128761222	128797228	A5SS	0.5	50	50	ENSMUST00000204394.3	ENSMUSG00000107872.3	Gm44511	chr6	protein_coding	predicted gene 44511
chr6	128757389;128760742	128760627;128795876	-	128757389;128795551	128795436;128795876	MXE	0.5	100	100	ENSMUST00000204423.3	ENSMUSG00000107872.3	Gm44511	chr6	protein_coding	predicted gene 44511
chr6	128761222	128797228	-	128796030	128797228	A3SS&ES	0.33	50	50	ENSMUST00000204423.3	ENSMUSG00000107872.3	Gm44511	chr6	protein_coding	predicted gene 44511
chr6	128792281	128795436	-	128757389	128795436	A3SS	0.5	50	50	ENSMUST00000204423.3	ENSMUSG00000107872.3	Gm44511	chr6	protein_coding	predicted gene 44511
chr6	128792281	128795876	-	128795551	128795876	A3SS&ES	0.33	50	50	ENSMUST00000204423.3	ENSMUSG00000107872.3	Gm44511	chr6	protein_coding	predicted gene 44511
chr6	128795958	128797228	-	128796030	128797228	A3SS	0.33	50	50	ENSMUST00000204423.3	ENSMUSG00000107872.3	Gm44511	chr6	protein_coding	predicted gene 44511
chr6	128792281	128795876	-	128760742	128795876	A3SS	0.33	50	50	ENSMUST00000204677.2	ENSMUSG00000107872.3	Gm44511	chr6	protein_coding	predicted gene 44511
chr6	128795551	128795876	-	128760742	128795876	A3SS	0.33	50	50	ENSMUST00000204677.2	ENSMUSG00000107872.3	Gm44511	chr6	protein_coding	predicted gene 44511
chr6	128792281	128795876	-	128792281;128795551	128795436;128795876	ES	0.5	50	50	ENSMUST00000032472.11	ENSMUSG00000079298.10	Klrb1b	chr6	protein_coding	killer cell lectin-like receptor subfamily B member 1B
chr6	128856553	128861901	-	128827168	128861901	A3SS	0.5	50	50	ENSMUST00000160290.8	ENSMUSG00000090164.9	BC035044	chr6	protein_coding	cDNA sequence BC035044
chr6	128864629	128870579	+	128864629;128869861	128869791;128870579	ES	0.33	50	50	ENSMUST00000032519.12	ENSMUSG00000030365.12	Clec2i	chr6	protein_coding	C-type lectin domain family 2, member i
chr6	128864629;128865067	128864993;128869791	+	128864629	128869791	cassetteExon	0.5	100	100	ENSMUST00000032519.12	ENSMUSG00000030365.12	Clec2i	chr6	protein_coding	C-type lectin domain family 2, member i
chr6	128869873	128870579	+	128869861	128870579	A5SS	0.33	50	50	ENSMUST00000032519.12	ENSMUSG00000030365.12	Clec2i	chr6	protein_coding	C-type lectin domain family 2, member i
chr6	128864629	128870579	+	128864629;128869873	128869791;128870579	ES	0.33	50	50	ENSMUST00000159866.8	ENSMUSG00000030365.12	Clec2i	chr6	protein_coding	C-type lectin domain family 2, member i
chr6	128864629	128870579	+	128864629	128869791	A3SS	0.33	50	50	ENSMUST00000159080.6	ENSMUSG00000030365.12	Clec2i	chr6	protein_coding	C-type lectin domain family 2, member i
chr6	128864629	128864993	+	128864629	128870579	A3SS	0.33	50	50	ENSMUST00000160867.3	ENSMUSG00000030365.12	Clec2i	chr6	protein_coding	C-type lectin domain family 2, member i
chr6	128948157	128956359	+	128925765	128956359	A5SS	0.25	50	50	ENSMUST00000000254.14	ENSMUSG00000000248.17	Clec2g	chr6	protein_coding	C-type lectin domain family 2, member g
chr6	128948269	128956359	+	128925765	128956359	A5SS	0.25	50	50	ENSMUST00000000254.14	ENSMUSG00000000248.17	Clec2g	chr6	protein_coding	C-type lectin domain family 2, member g
chr6	128948320	128956359	+	128925765	128956359	A5SS	0.25	50	50	ENSMUST00000000254.14	ENSMUSG00000000248.17	Clec2g	chr6	protein_coding	C-type lectin domain family 2, member g
chr6	128948269	128956359	+	128948157	128956359	A5SS	0.25	50	50	ENSMUST00000203405.3	ENSMUSG00000000248.17	Clec2g	chr6	protein_coding	C-type lectin domain family 2, member g
chr6	128948320	128956359	+	128948157	128956359	A5SS	0.25	50	50	ENSMUST00000203405.3	ENSMUSG00000000248.17	Clec2g	chr6	protein_coding	C-type lectin domain family 2, member g
chr6	128948320	128956359	+	128948269	128956359	A5SS	0.25	50	50	ENSMUST00000142388.8	ENSMUSG00000000248.17	Clec2g	chr6	protein_coding	C-type lectin domain family 2, member g
chr6	128970069;128978644	128978562;128979209	+	128970069	128979209	cassetteExon	0.5	100	100	ENSMUST00000131176.8	ENSMUSG00000087150.8	BC064078	chr6	transcribed_unprocessed_pseudogene	cDNA sequence BC064078
chr6	128979313	128980302	+	128979313	128982965	A3SS	0.5	50	50	ENSMUST00000131176.8	ENSMUSG00000087150.8	BC064078	chr6	transcribed_unprocessed_pseudogene	cDNA sequence BC064078
chr6	129029520	129030754	+	129029520;129030220	129030146;129030754	ES	0.5	50	50	ENSMUST00000203059.3	ENSMUSG00000030154.11	Klrb1f	chr6	protein_coding	killer cell lectin-like receptor subfamily B member 1F
chr6	129029520	129030675	+	129029520	129030146	A3SS&ES	0.33	50	50	ENSMUST00000203059.3	ENSMUSG00000030154.11	Klrb1f	chr6	protein_coding	killer cell lectin-like receptor subfamily B member 1F
chr6	129030220	129030675	+	129030220	129030754	A3SS	0.5	50	50	ENSMUST00000203059.3	ENSMUSG00000030154.11	Klrb1f	chr6	protein_coding	killer cell lectin-like receptor subfamily B member 1F
chr6	129026390	129029422	+	129022995	129029422	A5SS	0.5	50	50	ENSMUST00000203059.3	ENSMUSG00000030154.11	Klrb1f	chr6	protein_coding	killer cell lectin-like receptor subfamily B member 1F
chr6	129029520	129030675	+	129029520;129030220	129030146;129030675	ES	0.5	50	50	ENSMUST00000032257.10	ENSMUSG00000030154.11	Klrb1f	chr6	protein_coding	killer cell lectin-like receptor subfamily B member 1F
chr6	129029520	129030754	+	129029520	129030146	A3SS&ES	0.33	50	50	ENSMUST00000032257.10	ENSMUSG00000030154.11	Klrb1f	chr6	protein_coding	killer cell lectin-like receptor subfamily B member 1F
chr6	129029520	129030675	+	129029520	129030754	A3SS	0.33	50	50	ENSMUST00000204508.3	ENSMUSG00000030154.11	Klrb1f	chr6	protein_coding	killer cell lectin-like receptor subfamily B member 1F
chr6	129193499;129210116	129210027;129214702	-	129193499	129214702	cassetteExon	0.5	100	100	ENSMUST00000181238.2	ENSMUSG00000097354.8	2310001H17Rik	chr6	lncRNA	RIKEN cDNA 2310001H17 gene
chr6	129193499	129204591	-	129193499	129214702	A5SS	0.33	50	50	ENSMUST00000181238.2	ENSMUSG00000097354.8	2310001H17Rik	chr6	lncRNA	RIKEN cDNA 2310001H17 gene
chr6	129210116	129214702	-	129210116	129210848	5pMXE	0.33	50	50	ENSMUST00000181517.8	ENSMUSG00000097354.8	2310001H17Rik	chr6	lncRNA	RIKEN cDNA 2310001H17 gene
chr6	129193499;129204737	129204591;129210027	-	129193499	129210027	cassetteExon	0.5	100	100	ENSMUST00000181517.8	ENSMUSG00000097354.8	2310001H17Rik	chr6	lncRNA	RIKEN cDNA 2310001H17 gene
chr6	129209910	129210027	-	129193499	129210027	A3SS	0.33	50	50	ENSMUST00000181517.8	ENSMUSG00000097354.8	2310001H17Rik	chr6	lncRNA	RIKEN cDNA 2310001H17 gene
chr6	129210116	129210859	-	129210116	129210848	A5SS	0.33	50	50	ENSMUST00000181517.8	ENSMUSG00000097354.8	2310001H17Rik	chr6	lncRNA	RIKEN cDNA 2310001H17 gene
chr6	129209910	129210027	-	129204737	129210027	A3SS	0.33	50	50	ENSMUST00000205051.3	ENSMUSG00000097354.8	2310001H17Rik	chr6	lncRNA	RIKEN cDNA 2310001H17 gene
chr6	129210116	129210859	-	129210116	129214702	A5SS	0.33	50	50	ENSMUST00000205051.3	ENSMUSG00000097354.8	2310001H17Rik	chr6	lncRNA	RIKEN cDNA 2310001H17 gene
chr6	129217248	129222045	+	129217248;129219905	129219814;129222045	ES	0.5	50	50	ENSMUST00000219217.2	ENSMUSG00000112144.2	Gm47861	chr6	lncRNA	predicted gene, 47861
chr6	129247151	129252185	-	129247151;129248420	129248298;129252185	ES	0.5	50	50	ENSMUST00000032259.6	ENSMUSG00000030156.6	Cd69	chr6	protein_coding	CD69 antigen
chr6	129247151	129252185	-	129248420	129252185	3pMXE	0.5	50	50	ENSMUST00000203727.2	ENSMUSG00000030156.6	Cd69	chr6	protein_coding	CD69 antigen
chr6	129374641	129378435	+	129374641;129377118	129377023;129378435	ES	0.5	50	50	ENSMUST00000032262.14	ENSMUSG00000030159.16	Clec1b	chr6	protein_coding	C-type lectin domain family 1, member b
chr6	129378560	129380524	+	129378560;129378856	129378705;129380524	ES	0.5	50	50	ENSMUST00000032262.14	ENSMUSG00000030159.16	Clec1b	chr6	protein_coding	C-type lectin domain family 1, member b
chr6	129386008	129392184	+	129386008;129387318	129387238;129392184	ES	0.5	50	50	ENSMUST00000058352.15	ENSMUSG00000046080.18	Clec9a	chr6	protein_coding	C-type lectin domain family 9, member a
chr6	129392324	129396445	+	129392324;129393368	129393291;129396445	ES	0.5	50	50	ENSMUST00000058352.15	ENSMUSG00000046080.18	Clec9a	chr6	protein_coding	C-type lectin domain family 9, member a
chr6	129392324	129393291	+	129392324	129399189	A3SS	0.33	50	50	ENSMUST00000204860.3	ENSMUSG00000046080.18	Clec9a	chr6	protein_coding	C-type lectin domain family 9, member a
chr6	129392324	129396445	+	129392324	129399189	A3SS	0.33	50	50	ENSMUST00000204860.3	ENSMUSG00000046080.18	Clec9a	chr6	protein_coding	C-type lectin domain family 9, member a
chr6	129398125	129399189	+	129392324	129399189	A5SS	0.5	50	50	ENSMUST00000204860.3	ENSMUSG00000046080.18	Clec9a	chr6	protein_coding	C-type lectin domain family 9, member a
chr6	129412256	129428567	-	129412256;129413975	129413877;129428567	ES	0.33	50	50	ENSMUST00000203162.3	ENSMUSG00000033082.11	Clec1a	chr6	protein_coding	C-type lectin domain family 1, member a
chr6	129406973	129409085	-	129406921	129409085	A3SS	0.5	50	50	ENSMUST00000203162.3	ENSMUSG00000033082.11	Clec1a	chr6	protein_coding	C-type lectin domain family 1, member a
chr6	129413973	129428567	-	129413975	129428567	A3SS	0.33	50	50	ENSMUST00000203162.3	ENSMUSG00000033082.11	Clec1a	chr6	protein_coding	C-type lectin domain family 1, member a
chr6	129412256;129413973	129413877;129428567	-	129412256	129428567	cassetteExon	0.5	100	100	ENSMUST00000204012.2	ENSMUSG00000033082.11	Clec1a	chr6	protein_coding	C-type lectin domain family 1, member a
chr6	129444631	129447862	-	129444631;129445966	129445832;129447862	ES	0.5	50	50	ENSMUST00000195589.6	ENSMUSG00000079293.12	Clec7a	chr6	polymorphic_pseudogene	C-type lectin domain family 7, member a
chr6	129444631	129447862	-	129444631	129445832	A5SS&ES	0.5	50	50	ENSMUST00000112076.9	ENSMUSG00000079293.12	Clec7a	chr6	polymorphic_pseudogene	C-type lectin domain family 7, member a
chr6	129465931	129473775	-	129465931;129470606	129470469;129473775	ES	0.5	50	50	ENSMUST00000032265.13	ENSMUSG00000030162.15	Olr1	chr6	protein_coding	oxidized low density lipoprotein (lectin-like) receptor 1
chr6	129477088	129483998	-	129477088;129479143	129479042;129483998	ES	0.33	50	50	ENSMUST00000032265.13	ENSMUSG00000030162.15	Olr1	chr6	protein_coding	oxidized low density lipoprotein (lectin-like) receptor 1
chr6	129465931;129479143	129479042;129483998	-	129465931	129483998	cassetteExon	0.5	100	100	ENSMUST00000183258.8	ENSMUSG00000030162.15	Olr1	chr6	protein_coding	oxidized low density lipoprotein (lectin-like) receptor 1
chr6	129477088	129483998	-	129465931	129483998	A3SS	0.33	50	50	ENSMUST00000183258.8	ENSMUSG00000030162.15	Olr1	chr6	protein_coding	oxidized low density lipoprotein (lectin-like) receptor 1
chr6	129465931	129470469	-	129465931	129483998	A5SS	0.25	50	50	ENSMUST00000183258.8	ENSMUSG00000030162.15	Olr1	chr6	protein_coding	oxidized low density lipoprotein (lectin-like) receptor 1
chr6	129465931	129473775	-	129465931	129483998	A5SS	0.25	50	50	ENSMUST00000183258.8	ENSMUSG00000030162.15	Olr1	chr6	protein_coding	oxidized low density lipoprotein (lectin-like) receptor 1
chr6	129477088	129479042	-	129465931	129479042	A3SS	0.5	50	50	ENSMUST00000182784.4	ENSMUSG00000030162.15	Olr1	chr6	protein_coding	oxidized low density lipoprotein (lectin-like) receptor 1
chr6	129477088	129483998	-	129479143	129483998	A3SS&ES	0.33	50	50	ENSMUST00000182784.4	ENSMUSG00000030162.15	Olr1	chr6	protein_coding	oxidized low density lipoprotein (lectin-like) receptor 1
chr6	129465931	129470469	-	129465931	129479042	A5SS	0.25	50	50	ENSMUST00000182784.4	ENSMUSG00000030162.15	Olr1	chr6	protein_coding	oxidized low density lipoprotein (lectin-like) receptor 1
chr6	129465931	129473775	-	129465931	129479042	A5SS	0.25	50	50	ENSMUST00000182784.4	ENSMUSG00000030162.15	Olr1	chr6	protein_coding	oxidized low density lipoprotein (lectin-like) receptor 1
chr6	129490067	129493007	+	129490067;129491220	129491177;129493007	ES	0.5	50	50	ENSMUST00000032263.7	ENSMUSG00000030160.8	Tmem52b	chr6	protein_coding	transmembrane protein 52B
chr6	129510461	129514454	+	129510499	129514454	A5SS	0.33	50	50	ENSMUST00000032264.9	ENSMUSG00000030161.9	Gabarapl1	chr6	protein_coding	gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
chr6	129510706	129514454	+	129510499	129514454	A5SS	0.33	50	50	ENSMUST00000032264.9	ENSMUSG00000030161.9	Gabarapl1	chr6	protein_coding	gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
chr6	129510706	129514454	+	129510461	129514454	A5SS	0.33	50	50	ENSMUST00000204487.3	ENSMUSG00000030161.9	Gabarapl1	chr6	protein_coding	gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
chr6	129560197	129562546	+	129560197;129561209	129561109;129562546	ES	0.5	50	50	ENSMUST00000053708.9	ENSMUSG00000050241.9	Klre1	chr6	protein_coding	killer cell lectin-like receptor family E member 1
chr6	129557080	129558828	+	129557080	129558965	A3SS	0.5	50	50	ENSMUST00000053708.9	ENSMUSG00000050241.9	Klre1	chr6	protein_coding	killer cell lectin-like receptor family E member 1
chr6	129570753	129573825	+	129570753;129572524	129572373;129573825	ES	0.33	50	50	ENSMUST00000032268.14	ENSMUSG00000030165.17	Klrd1	chr6	protein_coding	killer cell lectin-like receptor, subfamily D, member 1
chr6	129572524;129573684	129573510;129573825	+	129572524	129573825	cassetteExon	0.5	100	100	ENSMUST00000032268.14	ENSMUSG00000030165.17	Klrd1	chr6	protein_coding	killer cell lectin-like receptor, subfamily D, member 1
chr6	129572524;129573684	129573628;129573825	+	129572524	129573825	cassetteExon	0.5	100	100	ENSMUST00000032268.14	ENSMUSG00000030165.17	Klrd1	chr6	protein_coding	killer cell lectin-like receptor, subfamily D, member 1
chr6	129573928	129575312	+	129573928	129575153	A3SS&ES	0.5	50	50	ENSMUST00000032268.14	ENSMUSG00000030165.17	Klrd1	chr6	protein_coding	killer cell lectin-like receptor, subfamily D, member 1
chr6	129572524	129573510	+	129572524	129573628	A3SS	0.33	50	50	ENSMUST00000119520.8	ENSMUSG00000030165.17	Klrd1	chr6	protein_coding	killer cell lectin-like receptor, subfamily D, member 1
chr6	129573684	129573825	+	129570753	129573825	A5SS	0.33	50	50	ENSMUST00000159804.2	ENSMUSG00000030165.17	Klrd1	chr6	protein_coding	killer cell lectin-like receptor, subfamily D, member 1
chr6	129593295	129593632	-	129593313	129593632	A3SS	0.5	50	50	ENSMUST00000168919.8	ENSMUSG00000030149.16	Klrk1	chr6	protein_coding	killer cell lectin-like receptor subfamily K, member 1
chr6	129598205	129599500	-	129598205	129600774	A5SS	0.5	50	50	ENSMUST00000168919.8	ENSMUSG00000030149.16	Klrk1	chr6	protein_coding	killer cell lectin-like receptor subfamily K, member 1
chr6	129618510	129619673	-	129618484	129619673	A3SS	0.33	50	50	ENSMUST00000203189.3	ENSMUSG00000033027.16	Klrc3	chr6	protein_coding	killer cell lectin-like receptor subfamily C, member 3
chr6	129618534	129619673	-	129618484	129619673	A3SS	0.33	50	50	ENSMUST00000203189.3	ENSMUSG00000033027.16	Klrc3	chr6	protein_coding	killer cell lectin-like receptor subfamily C, member 3
chr6	129618534	129619673	-	129618510	129619673	A3SS	0.33	50	50	ENSMUST00000170148.8	ENSMUSG00000033027.16	Klrc3	chr6	protein_coding	killer cell lectin-like receptor subfamily C, member 3
chr6	129635780	129636941	-	129635780;129636342	129636268;129636941	ES	0.33	50	50	ENSMUST00000145984.8	ENSMUSG00000052736.16	Klrc2	chr6	protein_coding	killer cell lectin-like receptor subfamily C, member 2
chr6	129633451	129633775	-	129626642	129633775	A3SS	0.5	50	50	ENSMUST00000145984.8	ENSMUSG00000052736.16	Klrc2	chr6	protein_coding	killer cell lectin-like receptor subfamily C, member 2
chr6	129635804	129636941	-	129636342	129636941	A3SS&ES	0.33	50	50	ENSMUST00000145984.8	ENSMUSG00000052736.16	Klrc2	chr6	protein_coding	killer cell lectin-like receptor subfamily C, member 2
chr6	129626642	129627814	-	129626642	129633775	A5SS	0.5	50	50	ENSMUST00000145984.8	ENSMUSG00000052736.16	Klrc2	chr6	protein_coding	killer cell lectin-like receptor subfamily C, member 2
chr6	129635780	129636941	-	129635804	129636941	A3SS	0.33	50	50	ENSMUST00000071920.11	ENSMUSG00000052736.16	Klrc2	chr6	protein_coding	killer cell lectin-like receptor subfamily C, member 2
chr6	129654285	129655259	-	129654285;129654778	129654728;129655259	ES	0.5	50	50	ENSMUST00000032270.13	ENSMUSG00000030167.16	Klrc1	chr6	protein_coding	killer cell lectin-like receptor subfamily C, member 1
chr6	129654778	129655687	-	129654778;129655360	129655259;129655687	ES	0.5	50	50	ENSMUST00000032270.13	ENSMUSG00000030167.16	Klrc1	chr6	protein_coding	killer cell lectin-like receptor subfamily C, member 1
chr6	129654285;129655360	129655259;129655687	-	129654285;129654778	129654728;129655687	MXE	0.5	100	100	ENSMUST00000169545.8	ENSMUSG00000030167.16	Klrc1	chr6	protein_coding	killer cell lectin-like receptor subfamily C, member 1
chr6	129743743	129745056	-	129744884	129745056	A3SS	0.5	50	50	ENSMUST00000118532.8	ENSMUSG00000071158.10	Klrh1	chr6	protein_coding	killer cell lectin-like receptor subfamily H, member 1
chr6	129851895	129853520	-	129851910	129853520	A3SS	0.5	50	50	ENSMUST00000014687.11	ENSMUSG00000014543.15	Klra17	chr6	protein_coding	killer cell lectin-like receptor, subfamily A, member 17
chr6	129886914	129890103	-	129886914;129888447	129888313;129890103	ES	0.5	50	50	ENSMUST00000014683.13	ENSMUSG00000030173.16	Klra5	chr6	protein_coding	killer cell lectin-like receptor, subfamily A, member 5
chr6	130135861	130137600	-	130135852	130137600	A3SS	0.5	50	50	ENSMUST00000203601.3	ENSMUSG00000072721.9	Klra14-ps	chr6	transcribed_unprocessed_pseudogene	killer cell lectin-like receptor subfamily A, member 14, pseudogene
chr6	130203544	130205478	-	130203544;130204096	130204058;130205478	ES	0.5	50	50	ENSMUST00000112013.8	ENSMUSG00000067599.14	Klra7	chr6	protein_coding	killer cell lectin-like receptor, subfamily A, member 7
chr6	130278253;130278795	130278757;130280124	-	130278253	130280124	cassetteExon	0.5	100	100	ENSMUST00000205252.3	ENSMUSG00000030178.16	Klra13-ps	chr6	transcribed_unprocessed_pseudogene	killer cell lectin-like receptor subfamily A, member 13, pseudogene
chr6	130268271	130275662	-	130268271	130275666	A5SS	0.5	50	50	ENSMUST00000205252.3	ENSMUSG00000030178.16	Klra13-ps	chr6	transcribed_unprocessed_pseudogene	killer cell lectin-like receptor subfamily A, member 13, pseudogene
chr6	130280345	130283279	-	130280345;130281295	130281215;130283279	ES	0.5	50	50	ENSMUST00000204367.3	ENSMUSG00000030178.16	Klra13-ps	chr6	transcribed_unprocessed_pseudogene	killer cell lectin-like receptor subfamily A, member 13, pseudogene
chr6	131016268	131027628	-	131015669	131027628	A3SS	0.5	50	50	ENSMUST00000204777.3	ENSMUSG00000108066.3	Gm44134	chr6	transcribed_unprocessed_pseudogene	predicted gene, 44134
chr6	131197227;131198868	131198770;131205169	-	131197227	131205169	cassetteExon	0.5	100	100	ENSMUST00000032306.15	ENSMUSG00000030187.16	Klra2	chr6	protein_coding	killer cell lectin-like receptor, subfamily A, member 2
chr6	131265109	131270035	-	131265109;131266410	131266352;131270035	ES	0.33	50	50	ENSMUST00000032307.12	ENSMUSG00000030188.13	Magohb	chr6	protein_coding	mago homolog B, exon junction complex core component
chr6	131266410;131268903	131268704;131270035	-	131266410	131270035	cassetteExon	0.5	100	100	ENSMUST00000032307.12	ENSMUSG00000030188.13	Magohb	chr6	protein_coding	mago homolog B, exon junction complex core component
chr6	131265195	131266352	-	131265109	131266352	A3SS	0.5	50	50	ENSMUST00000032307.12	ENSMUSG00000030188.13	Magohb	chr6	protein_coding	mago homolog B, exon junction complex core component
chr6	131268903	131270035	-	131265109	131270035	A3SS	0.33	50	50	ENSMUST00000172883.8	ENSMUSG00000030188.13	Magohb	chr6	protein_coding	mago homolog B, exon junction complex core component
chr6	131266410	131270035	-	131266410	131268704	5pMXE	0.5	50	50	ENSMUST00000173837.6	ENSMUSG00000030188.13	Magohb	chr6	protein_coding	mago homolog B, exon junction complex core component
chr6	131265109	131270035	-	131265109	131266352	5pMXE	0.5	50	50	ENSMUST00000174781.4	ENSMUSG00000030188.13	Magohb	chr6	protein_coding	mago homolog B, exon junction complex core component
chr6	131287027	131289414	-	131287027;131288162	131287896;131289414	ES	0.5	50	50	ENSMUST00000049150.8	ENSMUSG00000032899.15	Styk1	chr6	protein_coding	serine/threonine/tyrosine kinase 1
chr6	131289548	131299299	-	131289548	131289882	5pMXE	0.5	50	50	ENSMUST00000049150.8	ENSMUSG00000032899.15	Styk1	chr6	protein_coding	serine/threonine/tyrosine kinase 1
chr6	131287027	131289414	-	131288162	131289414	3pMXE	0.5	50	50	ENSMUST00000135859.2	ENSMUSG00000032899.15	Styk1	chr6	protein_coding	serine/threonine/tyrosine kinase 1
chr6	131315838	131330448	-	131299464	131330448	A3SS	0.5	50	50	ENSMUST00000135859.2	ENSMUSG00000032899.15	Styk1	chr6	protein_coding	serine/threonine/tyrosine kinase 1
chr6	131347377	131356321	-	131347377;131353143	131352937;131356321	ES	0.5	50	50	ENSMUST00000032309.13	ENSMUSG00000030189.16	Ybx3	chr6	protein_coding	Y box protein 3
chr6	131347377	131353450	-	131347377	131352937	A5SS&ES	0.33	50	50	ENSMUST00000032309.13	ENSMUSG00000030189.16	Ybx3	chr6	protein_coding	Y box protein 3
chr6	131347377	131353450	-	131347377	131356321	A5SS	0.33	50	50	ENSMUST00000087865.4	ENSMUSG00000030189.16	Ybx3	chr6	protein_coding	Y box protein 3
chr6	131466042	131467276	+	131466042	131529547	A3SS	0.5	50	50	ENSMUST00000075020.10	ENSMUSG00000094113.8	5430401F13Rik	chr6	protein_coding	RIKEN cDNA 5430401F13 gene
chr6	131528311	131529547	+	131466042	131529547	A5SS	0.5	50	50	ENSMUST00000075020.10	ENSMUSG00000094113.8	5430401F13Rik	chr6	protein_coding	RIKEN cDNA 5430401F13 gene
chr6	132603690	132604380	-	132603690	132604311	A5SS	0.5	50	50	ENSMUST00000203888.3	ENSMUSG00000067541.8	A630073D07Rik	chr6	protein_coding	RIKEN cDNA A630073D07 gene
chr6	133082568;133083493	133083326;133084827	+	133082568	133084827	cassetteExon	0.5	100	100	ENSMUST00000191462.2	ENSMUSG00000072704.7	Smim10l1	chr6	protein_coding	small integral membrane protein 10 like 1
chr6	133082568	133084827	+	133082568	133083326	3pMXE	0.5	50	50	ENSMUST00000186945.3	ENSMUSG00000072704.7	Smim10l1	chr6	protein_coding	small integral membrane protein 10 like 1
chr6	133829006	133830514	-	133829057	133830514	A3SS	0.5	50	50	ENSMUST00000048032.5	ENSMUSG00000032758.5	Kap	chr6	protein_coding	kidney androgen regulated protein
chr6	134013101;134043428	134043270;134114248	+	134013101	134114248	cassetteExon	0.5	100	100	ENSMUST00000081028.13	ENSMUSG00000030199.17	Etv6	chr6	protein_coding	ets variant 6
chr6	134013101	134114251	+	134013101	134114248	A3SS	0.33	50	50	ENSMUST00000081028.13	ENSMUSG00000030199.17	Etv6	chr6	protein_coding	ets variant 6
chr6	134224616	134225237	+	134210616	134225237	A5SS	0.5	50	50	ENSMUST00000081028.13	ENSMUSG00000030199.17	Etv6	chr6	protein_coding	ets variant 6
chr6	134013101	134114251	+	134013101	134043270	A3SS&ES	0.33	50	50	ENSMUST00000111963.8	ENSMUSG00000030199.17	Etv6	chr6	protein_coding	ets variant 6
chr6	134375754	134379779	+	134375754	134400574	A3SS	0.5	50	50	ENSMUST00000032321.11	ENSMUSG00000030200.14	Bcl2l14	chr6	protein_coding	BCL2-like 14 (apoptosis facilitator)
chr6	134375807	134400574	+	134375754	134400574	A5SS	0.33	50	50	ENSMUST00000032321.11	ENSMUSG00000030200.14	Bcl2l14	chr6	protein_coding	BCL2-like 14 (apoptosis facilitator)
chr6	134391598	134400574	+	134375754	134400574	A5SS	0.33	50	50	ENSMUST00000032321.11	ENSMUSG00000030200.14	Bcl2l14	chr6	protein_coding	BCL2-like 14 (apoptosis facilitator)
chr6	134391598	134400574	+	134375807	134400574	A5SS	0.33	50	50	ENSMUST00000127865.2	ENSMUSG00000030200.14	Bcl2l14	chr6	protein_coding	BCL2-like 14 (apoptosis facilitator)
chr6	134497556	134543606	-	134497556;134519008	134518615;134543606	ES	0.5	50	50	ENSMUST00000032322.15	ENSMUSG00000030201.16	Lrp6	chr6	protein_coding	low density lipoprotein receptor-related protein 6
chr6	134618220	134621292	+	134616650	134621292	A5SS	0.5	50	50	ENSMUST00000166591.8	ENSMUSG00000042992.16	Borcs5	chr6	protein_coding	BLOC-1 related complex subunit 5
chr6	134685025	134687007	+	134663084	134687007	A5SS	0.5	50	50	ENSMUST00000166591.8	ENSMUSG00000042992.16	Borcs5	chr6	protein_coding	BLOC-1 related complex subunit 5
chr6	134702958	134735582	-	134702958;134716938	134716775;134735582	ES	0.33	50	50	ENSMUST00000129433.4	ENSMUSG00000030203.18	Dusp16	chr6	protein_coding	dual specificity phosphatase 16
chr6	134716938;134718894	134718781;134735582	-	134716938	134735582	cassetteExon	0.5	100	100	ENSMUST00000129433.4	ENSMUSG00000030203.18	Dusp16	chr6	protein_coding	dual specificity phosphatase 16
chr6	134696014	134697457	-	134695048	134697457	A3SS	0.5	50	50	ENSMUST00000129433.4	ENSMUSG00000030203.18	Dusp16	chr6	protein_coding	dual specificity phosphatase 16
chr6	134696014	134702799	-	134697580	134702799	A3SS&ES	0.5	50	50	ENSMUST00000129433.4	ENSMUSG00000030203.18	Dusp16	chr6	protein_coding	dual specificity phosphatase 16
chr6	134716938	134720691	-	134716938	134735582	A5SS	0.33	50	50	ENSMUST00000129433.4	ENSMUSG00000030203.18	Dusp16	chr6	protein_coding	dual specificity phosphatase 16
chr6	134738397	134768201	-	134738397	134769240	A5SS	0.5	50	50	ENSMUST00000129433.4	ENSMUSG00000030203.18	Dusp16	chr6	protein_coding	dual specificity phosphatase 16
chr6	134696014	134702799	-	134696014;134697580	134697457;134702799	ES	0.5	50	50	ENSMUST00000100857.10	ENSMUSG00000030203.18	Dusp16	chr6	protein_coding	dual specificity phosphatase 16
chr6	134718894	134735582	-	134702958	134735582	A3SS	0.33	50	50	ENSMUST00000204083.3	ENSMUSG00000030203.18	Dusp16	chr6	protein_coding	dual specificity phosphatase 16
chr6	134716938	134718781	-	134716938	134720691	A5SS	0.33	50	50	ENSMUST00000203452.3	ENSMUSG00000030203.18	Dusp16	chr6	protein_coding	dual specificity phosphatase 16
chr6	134702958	134735582	-	134716938	134735582	3pMXE	0.33	50	50	ENSMUST00000149776.3	ENSMUSG00000030203.18	Dusp16	chr6	protein_coding	dual specificity phosphatase 16
chr6	134826263	134829241	+	134826263;134828187	134828043;134829241	ES	0.5	50	50	ENSMUST00000046303.12	ENSMUSG00000032652.14	Crebl2	chr6	protein_coding	cAMP responsive element binding protein-like 2
chr6	134826263	134829241	+	134828187	134829241	5pMXE	0.5	50	50	ENSMUST00000203742.2	ENSMUSG00000032652.14	Crebl2	chr6	protein_coding	cAMP responsive element binding protein-like 2
chr6	134874176	134874795	-	134874176	134874695	5pMXE	0.25	50	50	ENSMUST00000165392.8	ENSMUSG00000032641.19	Gpr19	chr6	protein_coding	G protein-coupled receptor 19
chr6	134874176	134875272	-	134874176	134874695	5pMXE	0.25	50	50	ENSMUST00000165392.8	ENSMUSG00000032641.19	Gpr19	chr6	protein_coding	G protein-coupled receptor 19
chr6	134847406;134854297	134854180;134864593	-	134847406	134864593	cassetteExon	0.5	100	100	ENSMUST00000165392.8	ENSMUSG00000032641.19	Gpr19	chr6	protein_coding	G protein-coupled receptor 19
chr6	134847406;134863899	134863854;134864593	-	134847406	134864593	cassetteExon	0.5	100	100	ENSMUST00000165392.8	ENSMUSG00000032641.19	Gpr19	chr6	protein_coding	G protein-coupled receptor 19
chr6	134864748;134869350	134869162;134874125	-	134864748	134874125	cassetteExon	0.5	100	100	ENSMUST00000165392.8	ENSMUSG00000032641.19	Gpr19	chr6	protein_coding	G protein-coupled receptor 19
chr6	134847445	134864593	-	134847406	134864593	A3SS	0.25	50	50	ENSMUST00000165392.8	ENSMUSG00000032641.19	Gpr19	chr6	protein_coding	G protein-coupled receptor 19
chr6	134864748	134873821	-	134864748	134874125	A5SS	0.33	50	50	ENSMUST00000165392.8	ENSMUSG00000032641.19	Gpr19	chr6	protein_coding	G protein-coupled receptor 19
chr6	134874176	134874725	-	134874176	134874695	A5SS	0.25	50	50	ENSMUST00000165392.8	ENSMUSG00000032641.19	Gpr19	chr6	protein_coding	G protein-coupled receptor 19
chr6	134874176	134875272	-	134874176	134874795	5pMXE	0.25	50	50	ENSMUST00000116515.9	ENSMUSG00000032641.19	Gpr19	chr6	protein_coding	G protein-coupled receptor 19
chr6	134847406;134863899	134863854;134864593	-	134847406;134854297	134854180;134864593	MXE	0.5	100	100	ENSMUST00000116515.9	ENSMUSG00000032641.19	Gpr19	chr6	protein_coding	G protein-coupled receptor 19
chr6	134854297;134863899	134863854;134864593	-	134854297	134864593	cassetteExon	0.5	100	100	ENSMUST00000116515.9	ENSMUSG00000032641.19	Gpr19	chr6	protein_coding	G protein-coupled receptor 19
chr6	134847445	134854180	-	134847406	134854180	A3SS	0.5	50	50	ENSMUST00000116515.9	ENSMUSG00000032641.19	Gpr19	chr6	protein_coding	G protein-coupled receptor 19
chr6	134847445	134864593	-	134854297	134864593	A3SS&ES	0.25	50	50	ENSMUST00000116515.9	ENSMUSG00000032641.19	Gpr19	chr6	protein_coding	G protein-coupled receptor 19
chr6	134864748	134869162	-	134864748	134873821	A5SS	0.33	50	50	ENSMUST00000116515.9	ENSMUSG00000032641.19	Gpr19	chr6	protein_coding	G protein-coupled receptor 19
chr6	134874176	134874725	-	134874176	134874795	A5SS	0.25	50	50	ENSMUST00000116515.9	ENSMUSG00000032641.19	Gpr19	chr6	protein_coding	G protein-coupled receptor 19
chr6	134847445;134854297	134854180;134864593	-	134847445	134864593	cassetteExon	0.5	100	100	ENSMUST00000046255.14	ENSMUSG00000032641.19	Gpr19	chr6	protein_coding	G protein-coupled receptor 19
chr6	134863899	134864593	-	134847445	134864593	A3SS	0.25	50	50	ENSMUST00000046255.14	ENSMUSG00000032641.19	Gpr19	chr6	protein_coding	G protein-coupled receptor 19
chr6	134847406	134864593	-	134854297	134864593	A3SS&ES	0.25	50	50	ENSMUST00000066107.10	ENSMUSG00000032641.19	Gpr19	chr6	protein_coding	G protein-coupled receptor 19
chr6	134847406;134854297	134854180;134863854	-	134847406	134863854	cassetteExon	0.5	100	100	ENSMUST00000215088.2	ENSMUSG00000032641.19	Gpr19	chr6	protein_coding	G protein-coupled receptor 19
chr6	134874176	134875272	-	134874176	134874725	5pMXE	0.25	50	50	ENSMUST00000203409.3	ENSMUSG00000032641.19	Gpr19	chr6	protein_coding	G protein-coupled receptor 19
chr6	134847406	134864593	-	134863899	134864593	3pMXE	0.25	50	50	ENSMUST00000156379.2	ENSMUSG00000032641.19	Gpr19	chr6	protein_coding	G protein-coupled receptor 19
chr6	134854297	134864593	-	134863899	134864593	3pMXE	0.25	50	50	ENSMUST00000156379.2	ENSMUSG00000032641.19	Gpr19	chr6	protein_coding	G protein-coupled receptor 19
chr6	134906223;134920700	134920603;134928269	+	134906223	134928269	cassetteExon	0.5	100	100	ENSMUST00000183867.7	ENSMUSG00000098318.8	Lockd	chr6	lncRNA	lncRNA downstream of Cdkn1b
chr6	134906248	134928269	+	134906223	134928269	A5SS	0.33	50	50	ENSMUST00000183867.7	ENSMUSG00000098318.8	Lockd	chr6	lncRNA	lncRNA downstream of Cdkn1b
chr6	134906164	134920603	+	134906164	134920600	A3SS	0.5	50	50	ENSMUST00000184991.8	ENSMUSG00000098318.8	Lockd	chr6	lncRNA	lncRNA downstream of Cdkn1b
chr6	134906223	134928269	+	134920700	134928269	A5SS&ES	0.33	50	50	ENSMUST00000184991.8	ENSMUSG00000098318.8	Lockd	chr6	lncRNA	lncRNA downstream of Cdkn1b
chr6	134906248	134928269	+	134920700	134928269	A5SS&ES	0.33	50	50	ENSMUST00000184991.8	ENSMUSG00000098318.8	Lockd	chr6	lncRNA	lncRNA downstream of Cdkn1b
chr6	134906223	134920603	+	134906164	134920603	A5SS	0.5	50	50	ENSMUST00000183905.8	ENSMUSG00000098318.8	Lockd	chr6	lncRNA	lncRNA downstream of Cdkn1b
chr6	134989358	134992539	+	134989358;134992346	134992158;134992539	ES	0.5	50	50	ENSMUST00000032326.11	ENSMUSG00000030204.11	Ddx47	chr6	protein_coding	DEAD box helicase 47
chr6	134992346	134992785	+	134992346;134992610	134992539;134992785	ES	0.5	50	50	ENSMUST00000032326.11	ENSMUSG00000030204.11	Ddx47	chr6	protein_coding	DEAD box helicase 47
chr6	134994200	134995937	+	134994200;134995160	134995014;134995937	ES	0.5	50	50	ENSMUST00000032326.11	ENSMUSG00000030204.11	Ddx47	chr6	protein_coding	DEAD box helicase 47
chr6	134992610	134992745	+	134992610	134992785	A3SS	0.5	50	50	ENSMUST00000032326.11	ENSMUSG00000030204.11	Ddx47	chr6	protein_coding	DEAD box helicase 47
chr6	134992336	134994084	+	134993616	134994084	A5SS&ES	0.33	50	50	ENSMUST00000032326.11	ENSMUSG00000030204.11	Ddx47	chr6	protein_coding	DEAD box helicase 47
chr6	134993257	134993545	+	134992903	134993545	A5SS	0.5	50	50	ENSMUST00000032326.11	ENSMUSG00000030204.11	Ddx47	chr6	protein_coding	DEAD box helicase 47
chr6	134988691	134989265	+	134988691	134994084	A3SS	0.5	50	50	ENSMUST00000130851.8	ENSMUSG00000030204.11	Ddx47	chr6	protein_coding	DEAD box helicase 47
chr6	134992336	134994084	+	134988691	134994084	A5SS	0.33	50	50	ENSMUST00000130851.8	ENSMUSG00000030204.11	Ddx47	chr6	protein_coding	DEAD box helicase 47
chr6	134993616	134994084	+	134988691	134994084	A5SS	0.33	50	50	ENSMUST00000130851.8	ENSMUSG00000030204.11	Ddx47	chr6	protein_coding	DEAD box helicase 47
chr6	134989358;134992336	134992158;134994084	+	134989358;134993616	134992539;134994084	MXE	0.5	100	100	ENSMUST00000205244.3	ENSMUSG00000030204.11	Ddx47	chr6	protein_coding	DEAD box helicase 47
chr6	134989358;134992346	134992158;134992785	+	134989358;134992610	134992539;134992785	MXE	0.5	100	100	ENSMUST00000205244.3	ENSMUSG00000030204.11	Ddx47	chr6	protein_coding	DEAD box helicase 47
chr6	134994200	134995937	+	134994200	134995014	3pMXE	0.5	50	50	ENSMUST00000205055.3	ENSMUSG00000030204.11	Ddx47	chr6	protein_coding	DEAD box helicase 47
chr6	134989358	134992539	+	134989358	134992158	A3SS&ES	0.5	50	50	ENSMUST00000205055.3	ENSMUSG00000030204.11	Ddx47	chr6	protein_coding	DEAD box helicase 47
chr6	134989358	134992539	+	134992346	134992539	5pMXE	0.5	50	50	ENSMUST00000123022.8	ENSMUSG00000030204.11	Ddx47	chr6	protein_coding	DEAD box helicase 47
chr6	134992346	134992785	+	134992346	134992539	A3SS&ES	0.5	50	50	ENSMUST00000123022.8	ENSMUSG00000030204.11	Ddx47	chr6	protein_coding	DEAD box helicase 47
chr6	135083263	135093011	-	135083263;135084796	135084729;135093011	ES	0.5	50	50	ENSMUST00000032327.14	ENSMUSG00000030205.16	Gprc5d	chr6	protein_coding	G protein-coupled receptor, family C, group 5, member D
chr6	135132287	135174874	-	135132287	135145018	5pMXE	0.33	50	50	ENSMUST00000045855.9	ENSMUSG00000042770.9	Hebp1	chr6	protein_coding	heme binding protein 1
chr6	135132287	135145136	-	135132287	135145018	A5SS	0.33	50	50	ENSMUST00000045855.9	ENSMUSG00000042770.9	Hebp1	chr6	protein_coding	heme binding protein 1
chr6	135132287	135174874	-	135132287	135145136	5pMXE	0.33	50	50	ENSMUST00000204000.2	ENSMUSG00000042770.9	Hebp1	chr6	protein_coding	heme binding protein 1
chr6	135210474	135220860	+	135210474	135210977	3pMXE	0.5	50	50	ENSMUST00000111915.8	ENSMUSG00000030207.16	Fam234b	chr6	protein_coding	family with sequence similarity 234, member B
chr6	135175215	135186031	+	135175099	135186031	A5SS	0.33	50	50	ENSMUST00000111915.8	ENSMUSG00000030207.16	Fam234b	chr6	protein_coding	family with sequence similarity 234, member B
chr6	135175484	135186031	+	135175099	135186031	A5SS	0.33	50	50	ENSMUST00000111915.8	ENSMUSG00000030207.16	Fam234b	chr6	protein_coding	family with sequence similarity 234, member B
chr6	135175484	135186031	+	135175215	135186031	A5SS	0.33	50	50	ENSMUST00000130612.2	ENSMUSG00000030207.16	Fam234b	chr6	protein_coding	family with sequence similarity 234, member B
chr6	135221397	135230271	-	135221397	135224832	5pMXE	0.33	50	50	ENSMUST00000087729.12	ENSMUSG00000030206.14	Gsg1	chr6	protein_coding	germ cell associated 1
chr6	135221397	135231131	-	135221397	135224832	5pMXE	0.33	50	50	ENSMUST00000087729.12	ENSMUSG00000030206.14	Gsg1	chr6	protein_coding	germ cell associated 1
chr6	135218395	135219172	-	135218395	135219049	A5SS	0.5	50	50	ENSMUST00000087729.12	ENSMUSG00000030206.14	Gsg1	chr6	protein_coding	germ cell associated 1
chr6	135221397;135230330	135230271;135231131	-	135221397	135231131	cassetteExon	0.5	100	100	ENSMUST00000111909.8	ENSMUSG00000030206.14	Gsg1	chr6	protein_coding	germ cell associated 1
chr6	135354286;135355516	135355406;135356899	+	135354286	135356899	cassetteExon	0.5	100	100	ENSMUST00000205156.3	ENSMUSG00000030208.16	Emp1	chr6	protein_coding	epithelial membrane protein 1
chr6	135344704	135354176	+	135340100	135354176	A5SS	0.5	50	50	ENSMUST00000205156.3	ENSMUSG00000030208.16	Emp1	chr6	protein_coding	epithelial membrane protein 1
chr6	135657331	135660973	+	135657331	135660239	3pMXE	0.5	50	50	ENSMUST00000205073.3	ENSMUSG00000107396.3	4930425L21Rik	chr6	lncRNA	RIKEN cDNA 4930425L21 gene
chr6	136148880	136150471	-	136148880	136149863	5pMXE	0.5	50	50	ENSMUST00000053880.13	ENSMUSG00000030209.15	Grin2b	chr6	protein_coding	glutamate receptor, ionotropic, NMDA2B (epsilon 2)
chr6	135847388	135899870	-	135820200	135899870	A3SS	0.5	50	50	ENSMUST00000053880.13	ENSMUSG00000030209.15	Grin2b	chr6	protein_coding	glutamate receptor, ionotropic, NMDA2B (epsilon 2)
chr6	136148880	136150471	-	136148880;136150101	136149863;136150471	ES	0.33	50	50	ENSMUST00000111905.8	ENSMUSG00000030209.15	Grin2b	chr6	protein_coding	glutamate receptor, ionotropic, NMDA2B (epsilon 2)
chr6	136149935	136150471	-	136150101	136150471	A3SS	0.33	50	50	ENSMUST00000111905.8	ENSMUSG00000030209.15	Grin2b	chr6	protein_coding	glutamate receptor, ionotropic, NMDA2B (epsilon 2)
chr6	136148880	136150471	-	136148880;136149935	136149863;136150471	ES	0.33	50	50	ENSMUST00000143943.8	ENSMUSG00000030209.15	Grin2b	chr6	protein_coding	glutamate receptor, ionotropic, NMDA2B (epsilon 2)
chr6	136149935	136150328	-	136149935	136150471	A5SS	0.5	50	50	ENSMUST00000143943.8	ENSMUSG00000030209.15	Grin2b	chr6	protein_coding	glutamate receptor, ionotropic, NMDA2B (epsilon 2)
chr6	136378903	136392325	-	136378884	136392325	A3SS	0.5	50	50	ENSMUST00000204830.2	ENSMUSG00000045291.9	E330021D16Rik	chr6	protein_coding	RIKEN cDNA E330021D16 gene
chr6	136495961	136540758	+	136483273	136540758	A5SS	0.33	50	50	ENSMUST00000203988.3	ENSMUSG00000030213.13	Atf7ip	chr6	protein_coding	activating transcription factor 7 interacting protein
chr6	136538437	136540758	+	136483273	136540758	A5SS	0.33	50	50	ENSMUST00000203988.3	ENSMUSG00000030213.13	Atf7ip	chr6	protein_coding	activating transcription factor 7 interacting protein
chr6	136540835	136542015	+	136540844	136542015	A5SS	0.5	50	50	ENSMUST00000203988.3	ENSMUSG00000030213.13	Atf7ip	chr6	protein_coding	activating transcription factor 7 interacting protein
chr6	136495961	136540758	+	136495961;136538437	136536762;136540758	ES	0.5	50	50	ENSMUST00000032335.13	ENSMUSG00000030213.13	Atf7ip	chr6	protein_coding	activating transcription factor 7 interacting protein
chr6	136495961;136532538	136532416;136536762	+	136495961	136536762	cassetteExon	0.5	100	100	ENSMUST00000032335.13	ENSMUSG00000030213.13	Atf7ip	chr6	protein_coding	activating transcription factor 7 interacting protein
chr6	136510051	136536762	+	136495961	136536762	A5SS	0.25	50	50	ENSMUST00000032335.13	ENSMUSG00000030213.13	Atf7ip	chr6	protein_coding	activating transcription factor 7 interacting protein
chr6	136528214	136536762	+	136495961	136536762	A5SS	0.25	50	50	ENSMUST00000032335.13	ENSMUSG00000030213.13	Atf7ip	chr6	protein_coding	activating transcription factor 7 interacting protein
chr6	136532538	136536768	+	136532538	136536762	A3SS	0.5	50	50	ENSMUST00000185724.7	ENSMUSG00000030213.13	Atf7ip	chr6	protein_coding	activating transcription factor 7 interacting protein
chr6	136510051	136536762	+	136532538	136536762	A5SS&ES	0.25	50	50	ENSMUST00000185724.7	ENSMUSG00000030213.13	Atf7ip	chr6	protein_coding	activating transcription factor 7 interacting protein
chr6	136528214	136536762	+	136532538	136536762	A5SS&ES	0.25	50	50	ENSMUST00000185724.7	ENSMUSG00000030213.13	Atf7ip	chr6	protein_coding	activating transcription factor 7 interacting protein
chr6	136531082	136532416	+	136495961	136532416	A5SS	0.5	50	50	ENSMUST00000185724.7	ENSMUSG00000030213.13	Atf7ip	chr6	protein_coding	activating transcription factor 7 interacting protein
chr6	136495961	136532416	+	136495961	136540758	A3SS	0.33	50	50	ENSMUST00000186577.7	ENSMUSG00000030213.13	Atf7ip	chr6	protein_coding	activating transcription factor 7 interacting protein
chr6	136495961	136536762	+	136495961	136540758	A3SS	0.33	50	50	ENSMUST00000186577.7	ENSMUSG00000030213.13	Atf7ip	chr6	protein_coding	activating transcription factor 7 interacting protein
chr6	136538437	136540758	+	136495961	136540758	A5SS	0.33	50	50	ENSMUST00000186577.7	ENSMUSG00000030213.13	Atf7ip	chr6	protein_coding	activating transcription factor 7 interacting protein
chr6	136528214	136536762	+	136510051	136536762	A5SS	0.25	50	50	ENSMUST00000187429.4	ENSMUSG00000030213.13	Atf7ip	chr6	protein_coding	activating transcription factor 7 interacting protein
chr6	136704907	136706167	-	136704907;136705400	136705329;136706167	ES	0.5	50	50	ENSMUST00000032338.10	ENSMUSG00000042638.15	Gucy2c	chr6	protein_coding	guanylate cyclase 2c
chr6	136795029	136798175	-	136795029;136797696	136797505;136798175	ES	0.5	50	50	ENSMUST00000116514.4	ENSMUSG00000030216.13	Wbp11	chr6	protein_coding	WW domain binding protein 11
chr6	136803107	136804564	-	136803107	136805018	A5SS	0.5	50	50	ENSMUST00000116514.4	ENSMUSG00000030216.13	Wbp11	chr6	protein_coding	WW domain binding protein 11
chr6	136795029;136798660	136798175;136799792	-	136795029;136797696	136797505;136799792	MXE	0.5	100	100	ENSMUST00000204272.3	ENSMUSG00000030216.13	Wbp11	chr6	protein_coding	WW domain binding protein 11
chr6	136797696;136798660	136798175;136799792	-	136797696	136799792	cassetteExon	0.5	100	100	ENSMUST00000204272.3	ENSMUSG00000030216.13	Wbp11	chr6	protein_coding	WW domain binding protein 11
chr6	136797696	136799792	-	136798660	136799792	A3SS&ES	0.5	50	50	ENSMUST00000151333.2	ENSMUSG00000030216.13	Wbp11	chr6	protein_coding	WW domain binding protein 11
chr6	136807994	136816738	+	136805246	136816738	A5SS	0.33	50	50	ENSMUST00000204086.2	ENSMUSG00000047515.9	BC049715	chr6	protein_coding	cDNA sequence BC049715
chr6	136809034	136816738	+	136805246	136816738	A5SS	0.33	50	50	ENSMUST00000204086.2	ENSMUSG00000047515.9	BC049715	chr6	protein_coding	cDNA sequence BC049715
chr6	136809034	136816738	+	136807994	136816738	A5SS	0.5	50	50	ENSMUST00000052702.7	ENSMUSG00000047515.9	BC049715	chr6	protein_coding	cDNA sequence BC049715
chr6	136809126	136812355	-	136808886	136812355	A3SS	0.5	50	50	ENSMUST00000068293.4	ENSMUSG00000043298.9	Smco3	chr6	protein_coding	single-pass membrane protein with coiled-coil domains 3
chr6	136898827	136899107	-	136898827	136899027	A5SS	0.5	50	50	ENSMUST00000032343.7	ENSMUSG00000030219.14	Erp27	chr6	protein_coding	endoplasmic reticulum protein 27
chr6	136910771	136918649	-	136910771	136918436	5pMXE	0.25	50	50	ENSMUST00000111892.8	ENSMUSG00000030220.14	Arhgdib	chr6	protein_coding	Rho, GDP dissociation inhibitor (GDI) beta
chr6	136910771	136918811	-	136910771	136918436	5pMXE	0.25	50	50	ENSMUST00000111892.8	ENSMUSG00000030220.14	Arhgdib	chr6	protein_coding	Rho, GDP dissociation inhibitor (GDI) beta
chr6	136910771	136911865	-	136910771	136918436	A5SS	0.25	50	50	ENSMUST00000111892.8	ENSMUSG00000030220.14	Arhgdib	chr6	protein_coding	Rho, GDP dissociation inhibitor (GDI) beta
chr6	136910771	136918811	-	136910771	136918649	5pMXE	0.25	50	50	ENSMUST00000032344.12	ENSMUSG00000030220.14	Arhgdib	chr6	protein_coding	Rho, GDP dissociation inhibitor (GDI) beta
chr6	136910771	136911865	-	136910771	136918649	A5SS	0.25	50	50	ENSMUST00000032344.12	ENSMUSG00000030220.14	Arhgdib	chr6	protein_coding	Rho, GDP dissociation inhibitor (GDI) beta
chr6	136909341	136918811	-	136909341;136910771	136910582;136918811	ES	0.5	50	50	ENSMUST00000111891.4	ENSMUSG00000030220.14	Arhgdib	chr6	protein_coding	Rho, GDP dissociation inhibitor (GDI) beta
chr6	136910771	136911865	-	136910771	136918811	A5SS	0.25	50	50	ENSMUST00000111891.4	ENSMUSG00000030220.14	Arhgdib	chr6	protein_coding	Rho, GDP dissociation inhibitor (GDI) beta
chr6	136936392	136940191	+	136936392;136938203	136938163;136940191	ES	0.5	50	50	ENSMUST00000204627.3	ENSMUSG00000064330.10	Pde6h	chr6	protein_coding	phosphodiesterase 6H, cGMP-specific, cone, gamma
chr6	136931577	136936224	+	136901214	136936224	A5SS	0.5	50	50	ENSMUST00000204627.3	ENSMUSG00000064330.10	Pde6h	chr6	protein_coding	phosphodiesterase 6H, cGMP-specific, cone, gamma
chr6	136936392	136940191	+	136938203	136940191	A5SS	0.5	50	50	ENSMUST00000057650.6	ENSMUSG00000064330.10	Pde6h	chr6	protein_coding	phosphodiesterase 6H, cGMP-specific, cone, gamma
chr6	137034884	137141933	-	137034884;137044053	137043997;137141933	ES	0.33	50	50	ENSMUST00000032347.11	ENSMUSG00000030222.14	Rerg	chr6	protein_coding	RAS-like, estrogen-regulated, growth-inhibitor
chr6	137097892	137141933	-	137044053	137141933	A3SS	0.33	50	50	ENSMUST00000032347.11	ENSMUSG00000030222.14	Rerg	chr6	protein_coding	RAS-like, estrogen-regulated, growth-inhibitor
chr6	137034884	137116897	-	137034884	137043997	A5SS&ES	0.33	50	50	ENSMUST00000032347.11	ENSMUSG00000030222.14	Rerg	chr6	protein_coding	RAS-like, estrogen-regulated, growth-inhibitor
chr6	137142100	137146478	-	137142100	137147436	A5SS	0.5	50	50	ENSMUST00000032347.11	ENSMUSG00000030222.14	Rerg	chr6	protein_coding	RAS-like, estrogen-regulated, growth-inhibitor
chr6	137097892	137141933	-	137034884	137141933	A3SS	0.33	50	50	ENSMUST00000119610.4	ENSMUSG00000030222.14	Rerg	chr6	protein_coding	RAS-like, estrogen-regulated, growth-inhibitor
chr6	137034884	137116897	-	137034884	137141933	A5SS	0.33	50	50	ENSMUST00000119610.4	ENSMUSG00000030222.14	Rerg	chr6	protein_coding	RAS-like, estrogen-regulated, growth-inhibitor
chr6	137395275;137397405	137397322;137403763	+	137395275	137403763	cassetteExon	0.5	100	100	ENSMUST00000167679.8	ENSMUSG00000030223.15	Ptpro	chr6	protein_coding	protein tyrosine phosphatase, receptor type, O
chr6	137387845	137387972	+	137377745	137387972	A5SS	0.5	50	50	ENSMUST00000167679.8	ENSMUSG00000030223.15	Ptpro	chr6	protein_coding	protein tyrosine phosphatase, receptor type, O
chr6	137429795	137431583	+	137427023	137431583	A5SS	0.33	50	50	ENSMUST00000167679.8	ENSMUSG00000030223.15	Ptpro	chr6	protein_coding	protein tyrosine phosphatase, receptor type, O
chr6	137431059	137431583	+	137427023	137431583	A5SS	0.33	50	50	ENSMUST00000167679.8	ENSMUSG00000030223.15	Ptpro	chr6	protein_coding	protein tyrosine phosphatase, receptor type, O
chr6	137431059	137431583	+	137429795	137431583	A5SS	0.33	50	50	ENSMUST00000203255.3	ENSMUSG00000030223.15	Ptpro	chr6	protein_coding	protein tyrosine phosphatase, receptor type, O
chr6	137514692	137568416	-	137514692;137516399	137516320;137568416	ES	0.33	50	50	ENSMUST00000058210.13	ENSMUSG00000015766.15	Eps8	chr6	protein_coding	epidermal growth factor receptor pathway substrate 8
chr6	137516399	137626050	-	137516399;137568490	137568416;137626050	ES	0.33	50	50	ENSMUST00000058210.13	ENSMUSG00000015766.15	Eps8	chr6	protein_coding	epidermal growth factor receptor pathway substrate 8
chr6	137568490	137631838	-	137568490	137626050	5pMXE	0.2	50	50	ENSMUST00000058210.13	ENSMUSG00000015766.15	Eps8	chr6	protein_coding	epidermal growth factor receptor pathway substrate 8
chr6	137505590;137507590	137507540;137514616	-	137505590	137514616	cassetteExon	0.5	100	100	ENSMUST00000058210.13	ENSMUSG00000015766.15	Eps8	chr6	protein_coding	epidermal growth factor receptor pathway substrate 8
chr6	137568490;137600381	137600346;137626050	-	137568490	137626050	cassetteExon	0.5	100	100	ENSMUST00000058210.13	ENSMUSG00000015766.15	Eps8	chr6	protein_coding	epidermal growth factor receptor pathway substrate 8
chr6	137516394	137568416	-	137516399	137568416	A3SS	0.33	50	50	ENSMUST00000058210.13	ENSMUSG00000015766.15	Eps8	chr6	protein_coding	epidermal growth factor receptor pathway substrate 8
chr6	137496514	137496692	-	137496514	137499151	A5SS	0.5	50	50	ENSMUST00000058210.13	ENSMUSG00000015766.15	Eps8	chr6	protein_coding	epidermal growth factor receptor pathway substrate 8
chr6	137516399	137547700	-	137516399	137568416	A5SS	0.25	50	50	ENSMUST00000058210.13	ENSMUSG00000015766.15	Eps8	chr6	protein_coding	epidermal growth factor receptor pathway substrate 8
chr6	137516399	137565991	-	137516399	137568416	A5SS	0.25	50	50	ENSMUST00000058210.13	ENSMUSG00000015766.15	Eps8	chr6	protein_coding	epidermal growth factor receptor pathway substrate 8
chr6	137568490	137572326	-	137568490	137626050	A5SS	0.2	50	50	ENSMUST00000058210.13	ENSMUSG00000015766.15	Eps8	chr6	protein_coding	epidermal growth factor receptor pathway substrate 8
chr6	137568490	137625115	-	137568490	137626050	A5SS	0.2	50	50	ENSMUST00000058210.13	ENSMUSG00000015766.15	Eps8	chr6	protein_coding	epidermal growth factor receptor pathway substrate 8
chr6	137516399	137565991	-	137516399	137547700	5pMXE	0.25	50	50	ENSMUST00000100841.9	ENSMUSG00000015766.15	Eps8	chr6	protein_coding	epidermal growth factor receptor pathway substrate 8
chr6	137516399	137626050	-	137516399	137547700	5pMXE	0.25	50	50	ENSMUST00000100841.9	ENSMUSG00000015766.15	Eps8	chr6	protein_coding	epidermal growth factor receptor pathway substrate 8
chr6	137514692;137568490	137568416;137626050	-	137514692;137516399	137516320;137626050	MXE	0.5	100	100	ENSMUST00000111878.8	ENSMUSG00000015766.15	Eps8	chr6	protein_coding	epidermal growth factor receptor pathway substrate 8
chr6	137600381	137626050	-	137516399	137626050	A3SS	0.33	50	50	ENSMUST00000111878.8	ENSMUSG00000015766.15	Eps8	chr6	protein_coding	epidermal growth factor receptor pathway substrate 8
chr6	137516399	137565991	-	137516399	137626050	A5SS	0.25	50	50	ENSMUST00000111878.8	ENSMUSG00000015766.15	Eps8	chr6	protein_coding	epidermal growth factor receptor pathway substrate 8
chr6	137514692	137568416	-	137514692;137516394	137516320;137568416	ES	0.33	50	50	ENSMUST00000147526.8	ENSMUSG00000015766.15	Eps8	chr6	protein_coding	epidermal growth factor receptor pathway substrate 8
chr6	137568490	137631838	-	137568490	137625115	5pMXE	0.2	50	50	ENSMUST00000147526.8	ENSMUSG00000015766.15	Eps8	chr6	protein_coding	epidermal growth factor receptor pathway substrate 8
chr6	137568490;137572406	137572326;137625115	-	137568490	137625115	cassetteExon	0.5	100	100	ENSMUST00000147526.8	ENSMUSG00000015766.15	Eps8	chr6	protein_coding	epidermal growth factor receptor pathway substrate 8
chr6	137568490	137600346	-	137568490	137625115	A5SS	0.2	50	50	ENSMUST00000147526.8	ENSMUSG00000015766.15	Eps8	chr6	protein_coding	epidermal growth factor receptor pathway substrate 8
chr6	137516399	137626050	-	137516399	137568416	A5SS&ES	0.25	50	50	ENSMUST00000132920.8	ENSMUSG00000015766.15	Eps8	chr6	protein_coding	epidermal growth factor receptor pathway substrate 8
chr6	137568490	137572326	-	137568490	137631838	A5SS	0.2	50	50	ENSMUST00000132920.8	ENSMUSG00000015766.15	Eps8	chr6	protein_coding	epidermal growth factor receptor pathway substrate 8
chr6	137568490	137600346	-	137568490	137631838	A5SS	0.2	50	50	ENSMUST00000132920.8	ENSMUSG00000015766.15	Eps8	chr6	protein_coding	epidermal growth factor receptor pathway substrate 8
chr6	137568490	137600346	-	137568490	137572326	A5SS&ES	0.33	50	50	ENSMUST00000139753.8	ENSMUSG00000015766.15	Eps8	chr6	protein_coding	epidermal growth factor receptor pathway substrate 8
chr6	137514692	137568416	-	137516399	137568416	3pMXE	0.33	50	50	ENSMUST00000134630.6	ENSMUSG00000015766.15	Eps8	chr6	protein_coding	epidermal growth factor receptor pathway substrate 8
chr6	137722338	137722505	+	137719087	137722505	A5SS	0.5	50	50	ENSMUST00000064910.7	ENSMUSG00000030224.11	Strap	chr6	protein_coding	serine/threonine kinase receptor associated protein
chr6	137731636	137740588	+	137731636	137737738	3pMXE	0.25	50	50	ENSMUST00000204100.3	ENSMUSG00000030225.12	Dera	chr6	protein_coding	deoxyribose-phosphate aldolase (putative)
chr6	137731636	137755122	+	137731636	137737738	3pMXE	0.25	50	50	ENSMUST00000204100.3	ENSMUSG00000030225.12	Dera	chr6	protein_coding	deoxyribose-phosphate aldolase (putative)
chr6	137731636	137807191	+	137731636	137737738	3pMXE	0.25	50	50	ENSMUST00000204100.3	ENSMUSG00000030225.12	Dera	chr6	protein_coding	deoxyribose-phosphate aldolase (putative)
chr6	137755219	137813771	+	137755219	137756508	3pMXE	0.5	50	50	ENSMUST00000203136.3	ENSMUSG00000030225.12	Dera	chr6	protein_coding	deoxyribose-phosphate aldolase (putative)
chr6	137731636	137740588	+	137731636	137755122	A3SS	0.33	50	50	ENSMUST00000203136.3	ENSMUSG00000030225.12	Dera	chr6	protein_coding	deoxyribose-phosphate aldolase (putative)
chr6	137749558	137755122	+	137731636	137755122	A5SS	0.5	50	50	ENSMUST00000203136.3	ENSMUSG00000030225.12	Dera	chr6	protein_coding	deoxyribose-phosphate aldolase (putative)
chr6	137813881	137819299	+	137813881	137814114	3pMXE	0.5	50	50	ENSMUST00000203216.3	ENSMUSG00000030225.12	Dera	chr6	protein_coding	deoxyribose-phosphate aldolase (putative)
chr6	137731636	137740588	+	137731636	137807191	A3SS	0.25	50	50	ENSMUST00000203216.3	ENSMUSG00000030225.12	Dera	chr6	protein_coding	deoxyribose-phosphate aldolase (putative)
chr6	137731636	137755122	+	137731636	137807191	A3SS	0.25	50	50	ENSMUST00000203216.3	ENSMUSG00000030225.12	Dera	chr6	protein_coding	deoxyribose-phosphate aldolase (putative)
chr6	137760061	137807191	+	137731636	137807191	A5SS	0.33	50	50	ENSMUST00000203216.3	ENSMUSG00000030225.12	Dera	chr6	protein_coding	deoxyribose-phosphate aldolase (putative)
chr6	137773880	137807191	+	137731636	137807191	A5SS	0.33	50	50	ENSMUST00000203216.3	ENSMUSG00000030225.12	Dera	chr6	protein_coding	deoxyribose-phosphate aldolase (putative)
chr6	137760061	137807191	+	137760061;137773880	137773752;137807191	ES	0.33	50	50	ENSMUST00000087675.9	ENSMUSG00000030225.12	Dera	chr6	protein_coding	deoxyribose-phosphate aldolase (putative)
chr6	137773880	137786484	+	137773880	137807191	A3SS	0.5	50	50	ENSMUST00000087675.9	ENSMUSG00000030225.12	Dera	chr6	protein_coding	deoxyribose-phosphate aldolase (putative)
chr6	137755219;137814170	137813771;137833675	+	137755219;137807303	137756508;137833675	MXE	0.5	100	100	ENSMUST00000203693.3	ENSMUSG00000030225.12	Dera	chr6	protein_coding	deoxyribose-phosphate aldolase (putative)
chr6	137807303;137814170	137813732;137833675	+	137807303	137833675	cassetteExon	0.5	100	100	ENSMUST00000203693.3	ENSMUSG00000030225.12	Dera	chr6	protein_coding	deoxyribose-phosphate aldolase (putative)
chr6	137961495	137964371	-	137961464	137964371	A3SS	0.5	50	50	ENSMUST00000111873.8	ENSMUSG00000044378.13	Slc15a5	chr6	protein_coding	solute carrier family 15, member 5
chr6	137994718	137994920	-	137989192	137994920	A3SS	0.5	50	50	ENSMUST00000111873.8	ENSMUSG00000044378.13	Slc15a5	chr6	protein_coding	solute carrier family 15, member 5
chr6	138010389	138013893	-	137995102	138013893	A3SS	0.5	50	50	ENSMUST00000111873.8	ENSMUSG00000044378.13	Slc15a5	chr6	protein_coding	solute carrier family 15, member 5
chr6	138117604	138127766	+	138117604;138124813	138124657;138127766	ES	0.5	50	50	ENSMUST00000008684.11	ENSMUSG00000008540.12	Mgst1	chr6	protein_coding	microsomal glutathione S-transferase 1
chr6	138124813	138133130	+	138124813;138127860	138127766;138133130	ES	0.33	50	50	ENSMUST00000008684.11	ENSMUSG00000008540.12	Mgst1	chr6	protein_coding	microsomal glutathione S-transferase 1
chr6	138127860;138130601	138130494;138133130	+	138127860	138133130	cassetteExon	0.5	100	100	ENSMUST00000008684.11	ENSMUSG00000008540.12	Mgst1	chr6	protein_coding	microsomal glutathione S-transferase 1
chr6	138117650	138124657	+	138117604	138124657	A5SS	0.2	50	50	ENSMUST00000008684.11	ENSMUSG00000008540.12	Mgst1	chr6	protein_coding	microsomal glutathione S-transferase 1
chr6	138118714	138124657	+	138117604	138124657	A5SS	0.2	50	50	ENSMUST00000008684.11	ENSMUSG00000008540.12	Mgst1	chr6	protein_coding	microsomal glutathione S-transferase 1
chr6	138118880	138124657	+	138117604	138124657	A5SS	0.2	50	50	ENSMUST00000008684.11	ENSMUSG00000008540.12	Mgst1	chr6	protein_coding	microsomal glutathione S-transferase 1
chr6	138120030	138124657	+	138117604	138124657	A5SS	0.2	50	50	ENSMUST00000008684.11	ENSMUSG00000008540.12	Mgst1	chr6	protein_coding	microsomal glutathione S-transferase 1
chr6	138117604;138127860	138127766;138133130	+	138117604;138124813	138124657;138133130	MXE	0.5	100	100	ENSMUST00000204628.3	ENSMUSG00000008540.12	Mgst1	chr6	protein_coding	microsomal glutathione S-transferase 1
chr6	138130601	138133130	+	138124813	138133130	A5SS	0.33	50	50	ENSMUST00000204628.3	ENSMUSG00000008540.12	Mgst1	chr6	protein_coding	microsomal glutathione S-transferase 1
chr6	138117604	138127766	+	138124813	138127766	A5SS&ES	0.5	50	50	ENSMUST00000120302.8	ENSMUSG00000008540.12	Mgst1	chr6	protein_coding	microsomal glutathione S-transferase 1
chr6	138118714	138124657	+	138117650	138124657	A5SS	0.2	50	50	ENSMUST00000120302.8	ENSMUSG00000008540.12	Mgst1	chr6	protein_coding	microsomal glutathione S-transferase 1
chr6	138118880	138124657	+	138117650	138124657	A5SS	0.2	50	50	ENSMUST00000120302.8	ENSMUSG00000008540.12	Mgst1	chr6	protein_coding	microsomal glutathione S-transferase 1
chr6	138120030	138124657	+	138117650	138124657	A5SS	0.2	50	50	ENSMUST00000120302.8	ENSMUSG00000008540.12	Mgst1	chr6	protein_coding	microsomal glutathione S-transferase 1
chr6	138118880	138124657	+	138118714	138124657	A5SS	0.2	50	50	ENSMUST00000120230.8	ENSMUSG00000008540.12	Mgst1	chr6	protein_coding	microsomal glutathione S-transferase 1
chr6	138120030	138124657	+	138118714	138124657	A5SS	0.2	50	50	ENSMUST00000120230.8	ENSMUSG00000008540.12	Mgst1	chr6	protein_coding	microsomal glutathione S-transferase 1
chr6	138120030	138124657	+	138118880	138124657	A5SS	0.2	50	50	ENSMUST00000118091.8	ENSMUSG00000008540.12	Mgst1	chr6	protein_coding	microsomal glutathione S-transferase 1
chr6	138124813	138133130	+	138124813	138127766	3pMXE	0.5	50	50	ENSMUST00000125810.2	ENSMUSG00000008540.12	Mgst1	chr6	protein_coding	microsomal glutathione S-transferase 1
chr6	138354323	138393472	-	138354323	138393413	A5SS	0.5	50	50	ENSMUST00000162772.8	ENSMUSG00000030226.13	Lmo3	chr6	protein_coding	LIM domain only 3
chr6	138393626	138398218	-	138393626	138465907	A5SS	0.2	50	50	ENSMUST00000162772.8	ENSMUSG00000030226.13	Lmo3	chr6	protein_coding	LIM domain only 3
chr6	138393626	138399439	-	138393626	138465907	A5SS	0.2	50	50	ENSMUST00000162772.8	ENSMUSG00000030226.13	Lmo3	chr6	protein_coding	LIM domain only 3
chr6	138393626	138401525	-	138393626	138465907	A5SS	0.2	50	50	ENSMUST00000162772.8	ENSMUSG00000030226.13	Lmo3	chr6	protein_coding	LIM domain only 3
chr6	138393626	138404075	-	138393626	138465907	A5SS	0.2	50	50	ENSMUST00000162772.8	ENSMUSG00000030226.13	Lmo3	chr6	protein_coding	LIM domain only 3
chr6	138393626	138399439	-	138393626	138398218	5pMXE	0.2	50	50	ENSMUST00000163065.8	ENSMUSG00000030226.13	Lmo3	chr6	protein_coding	LIM domain only 3
chr6	138393626	138401525	-	138393626	138398218	5pMXE	0.2	50	50	ENSMUST00000163065.8	ENSMUSG00000030226.13	Lmo3	chr6	protein_coding	LIM domain only 3
chr6	138393626	138404075	-	138393626	138398218	5pMXE	0.2	50	50	ENSMUST00000163065.8	ENSMUSG00000030226.13	Lmo3	chr6	protein_coding	LIM domain only 3
chr6	138393626	138404075	-	138393626	138401525	5pMXE	0.2	50	50	ENSMUST00000160050.2	ENSMUSG00000030226.13	Lmo3	chr6	protein_coding	LIM domain only 3
chr6	138393626	138399439	-	138393626	138401525	A5SS	0.2	50	50	ENSMUST00000160050.2	ENSMUSG00000030226.13	Lmo3	chr6	protein_coding	LIM domain only 3
chr6	138393626	138404075	-	138393626	138399439	5pMXE	0.2	50	50	ENSMUST00000163024.8	ENSMUSG00000030226.13	Lmo3	chr6	protein_coding	LIM domain only 3
chr6	138399504	138403311	-	138399504	138399727	5pMXE	0.33	50	50	ENSMUST00000161450.8	ENSMUSG00000030226.13	Lmo3	chr6	protein_coding	LIM domain only 3
chr6	138399504	138399634	-	138399504	138399727	A5SS	0.33	50	50	ENSMUST00000161450.8	ENSMUSG00000030226.13	Lmo3	chr6	protein_coding	LIM domain only 3
chr6	138399504	138403311	-	138399504	138399634	5pMXE	0.33	50	50	ENSMUST00000162185.8	ENSMUSG00000030226.13	Lmo3	chr6	protein_coding	LIM domain only 3
chr6	138400363	138404358	+	138400363;138402978	138402670;138404358	ES	0.33	50	50	ENSMUST00000159822.2	ENSMUSG00000089957.3	A830011K09Rik	chr6	lncRNA	RIKEN cDNA A830011K09 gene
chr6	138402798	138404358	+	138402978	138404358	A5SS	0.33	50	50	ENSMUST00000159822.2	ENSMUSG00000089957.3	A830011K09Rik	chr6	lncRNA	RIKEN cDNA A830011K09 gene
chr6	138404541	138404798	+	138404405	138404798	A5SS	0.5	50	50	ENSMUST00000159822.2	ENSMUSG00000089957.3	A830011K09Rik	chr6	lncRNA	RIKEN cDNA A830011K09 gene
chr6	138400363;138402798	138402670;138404358	+	138400363	138404358	cassetteExon	0.5	100	100	ENSMUST00000203961.2	ENSMUSG00000089957.3	A830011K09Rik	chr6	lncRNA	RIKEN cDNA A830011K09 gene
chr6	139564263;139565731	139565496;139598810	+	139564263	139598810	cassetteExon	0.5	100	100	ENSMUST00000188066.2	ENSMUSG00000030228.20	Pik3c2g	chr6	protein_coding	phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma
chr6	139576554	139598810	+	139564263	139598810	A5SS	0.25	50	50	ENSMUST00000188066.2	ENSMUSG00000030228.20	Pik3c2g	chr6	protein_coding	phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma
chr6	139595158	139598810	+	139564263	139598810	A5SS	0.25	50	50	ENSMUST00000188066.2	ENSMUSG00000030228.20	Pik3c2g	chr6	protein_coding	phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma
chr6	139610789	139626127	+	139610789	139612567	3pMXE	0.5	50	50	ENSMUST00000190962.7	ENSMUSG00000030228.20	Pik3c2g	chr6	protein_coding	phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma
chr6	139576554	139598810	+	139565731	139598810	A5SS	0.25	50	50	ENSMUST00000190962.7	ENSMUSG00000030228.20	Pik3c2g	chr6	protein_coding	phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma
chr6	139595158	139598810	+	139565731	139598810	A5SS	0.25	50	50	ENSMUST00000190962.7	ENSMUSG00000030228.20	Pik3c2g	chr6	protein_coding	phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma
chr6	139591081	139593313	+	139576554	139593313	A5SS	0.5	50	50	ENSMUST00000187618.7	ENSMUSG00000030228.20	Pik3c2g	chr6	protein_coding	phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma
chr6	139576554	139593313	+	139576554	139598810	A3SS	0.5	50	50	ENSMUST00000186585.3	ENSMUSG00000030228.20	Pik3c2g	chr6	protein_coding	phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma
chr6	139595158	139598810	+	139576554	139598810	A5SS	0.25	50	50	ENSMUST00000186585.3	ENSMUSG00000030228.20	Pik3c2g	chr6	protein_coding	phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma
chr6	139793395	139796931	+	139793395	139798516	A3SS	0.5	50	50	ENSMUST00000111868.11	ENSMUSG00000030228.20	Pik3c2g	chr6	protein_coding	phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma
chr6	139842575	139845250	+	139842575	139846002	A3SS	0.5	50	50	ENSMUST00000111868.11	ENSMUSG00000030228.20	Pik3c2g	chr6	protein_coding	phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma
chr6	139881802	139887919	+	139881802	139903432	A3SS	0.5	50	50	ENSMUST00000111868.11	ENSMUSG00000030228.20	Pik3c2g	chr6	protein_coding	phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma
chr6	139787421	139789614	+	139718229	139789614	A5SS	0.33	50	50	ENSMUST00000111868.11	ENSMUSG00000030228.20	Pik3c2g	chr6	protein_coding	phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma
chr6	139789378	139789614	+	139718229	139789614	A5SS	0.33	50	50	ENSMUST00000111868.11	ENSMUSG00000030228.20	Pik3c2g	chr6	protein_coding	phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma
chr6	139789378	139789614	+	139787421	139789614	A5SS	0.33	50	50	ENSMUST00000189374.7	ENSMUSG00000030228.20	Pik3c2g	chr6	protein_coding	phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma
chr6	139966185	139968844	-	139961956	139968844	A3SS	0.5	50	50	ENSMUST00000032356.13	ENSMUSG00000030230.16	Plcz1	chr6	protein_coding	phospholipase C, zeta 1
chr6	139974284	139985381	-	139974281	139985381	A3SS	0.33	50	50	ENSMUST00000032356.13	ENSMUSG00000030230.16	Plcz1	chr6	protein_coding	phospholipase C, zeta 1
chr6	139974311	139985381	-	139974281	139985381	A3SS	0.33	50	50	ENSMUST00000032356.13	ENSMUSG00000030230.16	Plcz1	chr6	protein_coding	phospholipase C, zeta 1
chr6	139974284	139985381	-	139974311	139985381	A3SS	0.33	50	50	ENSMUST00000137148.8	ENSMUSG00000030230.16	Plcz1	chr6	protein_coding	phospholipase C, zeta 1
chr6	140472287	140480188	+	140472287;140474359	140474287;140480188	ES	0.5	50	50	ENSMUST00000087622.6	ENSMUSG00000030231.12	Plekha5	chr6	protein_coding	pleckstrin homology domain containing, family A member 5
chr6	140482489	140489446	+	140482489;140482749	140482732;140489446	ES	0.5	50	50	ENSMUST00000087622.6	ENSMUSG00000030231.12	Plekha5	chr6	protein_coding	pleckstrin homology domain containing, family A member 5
chr6	140509374	140515079	+	140509374;140514607	140514572;140515079	ES	0.25	50	50	ENSMUST00000087622.6	ENSMUSG00000030231.12	Plekha5	chr6	protein_coding	pleckstrin homology domain containing, family A member 5
chr6	140525202	140527694	+	140525202;140526261	140526073;140527694	ES	0.5	50	50	ENSMUST00000087622.6	ENSMUSG00000030231.12	Plekha5	chr6	protein_coding	pleckstrin homology domain containing, family A member 5
chr6	140535481	140539281	+	140535481;140537490	140537354;140539281	ES	0.5	50	50	ENSMUST00000087622.6	ENSMUSG00000030231.12	Plekha5	chr6	protein_coding	pleckstrin homology domain containing, family A member 5
chr6	140509374;140514237	140514220;140514572	+	140509374	140514572	cassetteExon	0.5	100	100	ENSMUST00000087622.6	ENSMUSG00000030231.12	Plekha5	chr6	protein_coding	pleckstrin homology domain containing, family A member 5
chr6	140502583	140502812	+	140502583	140509294	A3SS	0.33	50	50	ENSMUST00000087622.6	ENSMUSG00000030231.12	Plekha5	chr6	protein_coding	pleckstrin homology domain containing, family A member 5
chr6	140523064	140525153	+	140523064	140525156	A3SS	0.5	50	50	ENSMUST00000087622.6	ENSMUSG00000030231.12	Plekha5	chr6	protein_coding	pleckstrin homology domain containing, family A member 5
chr6	140537490	140541975	+	140537490	140539281	A3SS	0.5	50	50	ENSMUST00000087622.6	ENSMUSG00000030231.12	Plekha5	chr6	protein_coding	pleckstrin homology domain containing, family A member 5
chr6	140378780	140470591	+	140372281	140470591	A5SS	0.33	50	50	ENSMUST00000087622.6	ENSMUSG00000030231.12	Plekha5	chr6	protein_coding	pleckstrin homology domain containing, family A member 5
chr6	140462212	140470591	+	140372281	140470591	A5SS	0.33	50	50	ENSMUST00000087622.6	ENSMUSG00000030231.12	Plekha5	chr6	protein_coding	pleckstrin homology domain containing, family A member 5
chr6	140481086	140482374	+	140480288	140482374	A5SS	0.5	50	50	ENSMUST00000087622.6	ENSMUSG00000030231.12	Plekha5	chr6	protein_coding	pleckstrin homology domain containing, family A member 5
chr6	140498524;140509374	140509294;140515079	+	140498524	140515079	cassetteExon	0.5	100	100	ENSMUST00000204145.3	ENSMUSG00000030231.12	Plekha5	chr6	protein_coding	pleckstrin homology domain containing, family A member 5
chr6	140498524	140501677	+	140498524	140515079	A3SS	0.33	50	50	ENSMUST00000204145.3	ENSMUSG00000030231.12	Plekha5	chr6	protein_coding	pleckstrin homology domain containing, family A member 5
chr6	140502583	140515079	+	140498524	140515079	A5SS	0.25	50	50	ENSMUST00000204145.3	ENSMUSG00000030231.12	Plekha5	chr6	protein_coding	pleckstrin homology domain containing, family A member 5
chr6	140514607	140515079	+	140498524	140515079	A5SS	0.25	50	50	ENSMUST00000204145.3	ENSMUSG00000030231.12	Plekha5	chr6	protein_coding	pleckstrin homology domain containing, family A member 5
chr6	140498524;140509374	140509294;140515079	+	140498524;140502583	140501677;140515079	MXE	0.5	100	100	ENSMUST00000203517.3	ENSMUSG00000030231.12	Plekha5	chr6	protein_coding	pleckstrin homology domain containing, family A member 5
chr6	140502583;140509374	140509294;140515079	+	140502583	140515079	cassetteExon	0.5	100	100	ENSMUST00000203517.3	ENSMUSG00000030231.12	Plekha5	chr6	protein_coding	pleckstrin homology domain containing, family A member 5
chr6	140502583	140502812	+	140502583	140515079	A3SS	0.33	50	50	ENSMUST00000203517.3	ENSMUSG00000030231.12	Plekha5	chr6	protein_coding	pleckstrin homology domain containing, family A member 5
chr6	140514607	140515079	+	140502583	140515079	A5SS	0.25	50	50	ENSMUST00000203517.3	ENSMUSG00000030231.12	Plekha5	chr6	protein_coding	pleckstrin homology domain containing, family A member 5
chr6	140462212	140470591	+	140378780	140470591	A5SS	0.33	50	50	ENSMUST00000203774.3	ENSMUSG00000030231.12	Plekha5	chr6	protein_coding	pleckstrin homology domain containing, family A member 5
chr6	140509374;140514607	140514220;140515079	+	140509374	140515079	cassetteExon	0.5	100	100	ENSMUST00000203955.3	ENSMUSG00000030231.12	Plekha5	chr6	protein_coding	pleckstrin homology domain containing, family A member 5
chr6	140498524	140501677	+	140498524	140509294	A3SS	0.33	50	50	ENSMUST00000203955.3	ENSMUSG00000030231.12	Plekha5	chr6	protein_coding	pleckstrin homology domain containing, family A member 5
chr6	140502583	140509294	+	140498524	140509294	A5SS	0.5	50	50	ENSMUST00000203955.3	ENSMUSG00000030231.12	Plekha5	chr6	protein_coding	pleckstrin homology domain containing, family A member 5
chr6	140502583	140515079	+	140509374	140515079	A5SS&ES	0.25	50	50	ENSMUST00000203955.3	ENSMUSG00000030231.12	Plekha5	chr6	protein_coding	pleckstrin homology domain containing, family A member 5
chr6	140537490	140541975	+	140537490;140539383	140539281;140541975	ES	0.5	50	50	ENSMUST00000205255.3	ENSMUSG00000030231.12	Plekha5	chr6	protein_coding	pleckstrin homology domain containing, family A member 5
chr6	140535481;140537490	140537354;140541975	+	140535481;140539383	140539281;140541975	MXE	0.5	100	100	ENSMUST00000204080.3	ENSMUSG00000030231.12	Plekha5	chr6	protein_coding	pleckstrin homology domain containing, family A member 5
chr6	140570070	140579415	+	140568784	140579415	A5SS	0.25	50	50	ENSMUST00000032359.15	ENSMUSG00000030232.19	Aebp2	chr6	protein_coding	AE binding protein 2
chr6	140570761	140579415	+	140568784	140579415	A5SS	0.25	50	50	ENSMUST00000032359.15	ENSMUSG00000030232.19	Aebp2	chr6	protein_coding	AE binding protein 2
chr6	140572783	140579415	+	140568784	140579415	A5SS	0.25	50	50	ENSMUST00000032359.15	ENSMUSG00000030232.19	Aebp2	chr6	protein_coding	AE binding protein 2
chr6	140588948	140589674	+	140588084	140589674	A5SS	0.5	50	50	ENSMUST00000032359.15	ENSMUSG00000030232.19	Aebp2	chr6	protein_coding	AE binding protein 2
chr6	140570761	140579415	+	140570070	140579415	A5SS	0.25	50	50	ENSMUST00000087614.11	ENSMUSG00000030232.19	Aebp2	chr6	protein_coding	AE binding protein 2
chr6	140572783	140579415	+	140570070	140579415	A5SS	0.25	50	50	ENSMUST00000087614.11	ENSMUSG00000030232.19	Aebp2	chr6	protein_coding	AE binding protein 2
chr6	140596508	140597042	+	140596508	140623117	A3SS	0.33	50	50	ENSMUST00000095350.11	ENSMUSG00000030232.19	Aebp2	chr6	protein_coding	AE binding protein 2
chr6	140596508	140599484	+	140596508	140623117	A3SS	0.33	50	50	ENSMUST00000095350.11	ENSMUSG00000030232.19	Aebp2	chr6	protein_coding	AE binding protein 2
chr6	140596508	140599484	+	140596508	140597042	3pMXE	0.33	50	50	ENSMUST00000160836.8	ENSMUSG00000030232.19	Aebp2	chr6	protein_coding	AE binding protein 2
chr6	140572783	140579415	+	140570761	140579415	A5SS	0.25	50	50	ENSMUST00000160836.8	ENSMUSG00000030232.19	Aebp2	chr6	protein_coding	AE binding protein 2
chr6	140901490	140987755	+	140901490;140908996	140908829;140987755	ES	0.5	50	50	ENSMUST00000204271.3	ENSMUSG00000107638.3	Gm30524	chr6	lncRNA	predicted gene, 30524
chr6	141485909	141490459	+	141485909;141487964	141487818;141490459	ES	0.5	50	50	ENSMUST00000204998.3	ENSMUSG00000030235.18	Slco1c1	chr6	protein_coding	solute carrier organic anion transporter family, member 1c1
chr6	141470468;141485038	141484906;141485776	+	141470468;141477332	141477180;141485776	MXE	0.5	100	100	ENSMUST00000204998.3	ENSMUSG00000030235.18	Slco1c1	chr6	protein_coding	solute carrier organic anion transporter family, member 1c1
chr6	141477332	141478368	+	141477332	141485776	A3SS	0.5	50	50	ENSMUST00000204998.3	ENSMUSG00000030235.18	Slco1c1	chr6	protein_coding	solute carrier organic anion transporter family, member 1c1
chr6	141500913	141505508	+	141500913	141505467	A3SS	0.5	50	50	ENSMUST00000204998.3	ENSMUSG00000030235.18	Slco1c1	chr6	protein_coding	solute carrier organic anion transporter family, member 1c1
chr6	141513297	141515032	+	141513398	141515032	A5SS	0.5	50	50	ENSMUST00000204998.3	ENSMUSG00000030235.18	Slco1c1	chr6	protein_coding	solute carrier organic anion transporter family, member 1c1
chr6	141478509	141484906	+	141470468	141484906	A5SS	0.5	50	50	ENSMUST00000203140.2	ENSMUSG00000030235.18	Slco1c1	chr6	protein_coding	solute carrier organic anion transporter family, member 1c1
chr6	141616879	141617868	+	141616984	141617868	A5SS	0.5	50	50	ENSMUST00000042812.9	ENSMUSG00000030236.11	Slco1b2	chr6	protein_coding	solute carrier organic anion transporter family, member 1b2
chr6	141791244	141800939	-	141791244;141798044	141797931;141800939	ES	0.5	50	50	ENSMUST00000165990.8	ENSMUSG00000030237.15	Slco1a4	chr6	protein_coding	solute carrier organic anion transporter family, member 1a4
chr6	141854856	141857537	-	141854856;141856523	141856434;141857537	ES	0.5	50	50	ENSMUST00000168119.8	ENSMUSG00000041698.12	Slco1a1	chr6	protein_coding	solute carrier organic anion transporter family, member 1a1
chr6	141954471	141957081	-	141954471;141955509	141955424;141957081	ES	0.5	50	50	ENSMUST00000181791.8	ENSMUSG00000079263.9	Gm6614	chr6	protein_coding	predicted gene 6614
chr6	142095145	142102961	-	142091496	142102961	A3SS	0.5	50	50	ENSMUST00000111827.4	ENSMUSG00000079262.4	Slco1a6	chr6	protein_coding	solute carrier organic anion transporter family, member 1a6
chr6	142106838	142112735	-	142106838	142131755	A5SS	0.5	50	50	ENSMUST00000111827.4	ENSMUSG00000079262.4	Slco1a6	chr6	protein_coding	solute carrier organic anion transporter family, member 1a6
chr6	142208454;142212156	142212024;142213918	-	142208454	142213918	cassetteExon	0.5	100	100	ENSMUST00000153268.10	ENSMUSG00000063975.14	Slco1a5	chr6	protein_coding	solute carrier organic anion transporter family, member 1a5
chr6	142214010	142221185	-	142214059	142221185	A3SS	0.5	50	50	ENSMUST00000153268.10	ENSMUSG00000063975.14	Slco1a5	chr6	protein_coding	solute carrier organic anion transporter family, member 1a5
chr6	142221294	142268634	-	142221294	142224475	5pMXE	0.5	50	50	ENSMUST00000111825.10	ENSMUSG00000063975.14	Slco1a5	chr6	protein_coding	solute carrier organic anion transporter family, member 1a5
chr6	142292768	142293284	+	142291533	142293284	A5SS	0.5	50	50	ENSMUST00000041852.8	ENSMUSG00000041671.14	Pyroxd1	chr6	protein_coding	pyridine nucleotide-disulphide oxidoreductase domain 1
chr6	142303780	142308532	-	142296271	142308532	A3SS	0.2	50	50	ENSMUST00000032370.13	ENSMUSG00000030243.17	Recql	chr6	protein_coding	RecQ protein-like
chr6	142304052	142308532	-	142296271	142308532	A3SS	0.2	50	50	ENSMUST00000032370.13	ENSMUSG00000030243.17	Recql	chr6	protein_coding	RecQ protein-like
chr6	142305718	142308532	-	142296271	142308532	A3SS	0.2	50	50	ENSMUST00000032370.13	ENSMUSG00000030243.17	Recql	chr6	protein_coding	RecQ protein-like
chr6	142308078	142308532	-	142296271	142308532	A3SS	0.2	50	50	ENSMUST00000032370.13	ENSMUSG00000030243.17	Recql	chr6	protein_coding	RecQ protein-like
chr6	142311333	142312351	-	142311333	142312393	A5SS	0.5	50	50	ENSMUST00000032370.13	ENSMUSG00000030243.17	Recql	chr6	protein_coding	RecQ protein-like
chr6	142330302	142332445	-	142330302	142332748	A5SS	0.5	50	50	ENSMUST00000032370.13	ENSMUSG00000030243.17	Recql	chr6	protein_coding	RecQ protein-like
chr6	142304052	142308532	-	142303780	142308532	A3SS	0.2	50	50	ENSMUST00000100832.10	ENSMUSG00000030243.17	Recql	chr6	protein_coding	RecQ protein-like
chr6	142305718	142308532	-	142303780	142308532	A3SS	0.2	50	50	ENSMUST00000100832.10	ENSMUSG00000030243.17	Recql	chr6	protein_coding	RecQ protein-like
chr6	142308078	142308532	-	142303780	142308532	A3SS	0.2	50	50	ENSMUST00000100832.10	ENSMUSG00000030243.17	Recql	chr6	protein_coding	RecQ protein-like
chr6	142304052	142308532	-	142305718	142308532	A3SS	0.2	50	50	ENSMUST00000141504.8	ENSMUSG00000030243.17	Recql	chr6	protein_coding	RecQ protein-like
chr6	142308078	142308532	-	142305718	142308532	A3SS	0.2	50	50	ENSMUST00000141504.8	ENSMUSG00000030243.17	Recql	chr6	protein_coding	RecQ protein-like
chr6	142308078	142308532	-	142304052	142308532	A3SS	0.2	50	50	ENSMUST00000138578.2	ENSMUSG00000030243.17	Recql	chr6	protein_coding	RecQ protein-like
chr6	142333095	142338056	+	142333095	142341914	A3SS	0.5	50	50	ENSMUST00000146508.2	ENSMUSG00000030245.11	Golt1b	chr6	protein_coding	golgi transport 1B
chr6	142339832	142341914	+	142333095	142341914	A5SS	0.5	50	50	ENSMUST00000146508.2	ENSMUSG00000030245.11	Golt1b	chr6	protein_coding	golgi transport 1B
chr6	142362194	142364239	+	142362200	142364239	A5SS	0.5	50	50	ENSMUST00000126521.9	ENSMUSG00000071112.13	Spx	chr6	protein_coding	spexin hormone
chr6	142368557	142369247	-	142368557	142369120	A5SS	0.5	50	50	ENSMUST00000032371.8	ENSMUSG00000030244.8	Gys2	chr6	protein_coding	glycogen synthase 2
chr6	142436330;142439943	142439826;142441294	-	142436330	142441294	cassetteExon	0.5	100	100	ENSMUST00000130817.3	ENSMUSG00000030246.13	Ldhb	chr6	protein_coding	lactate dehydrogenase B
chr6	142436330	142438219	-	142436330	142441294	A5SS	0.33	50	50	ENSMUST00000130817.3	ENSMUSG00000030246.13	Ldhb	chr6	protein_coding	lactate dehydrogenase B
chr6	142436330	142439826	-	142436330;142438342	142438219;142439826	ES	0.5	50	50	ENSMUST00000239395.2	ENSMUSG00000030246.13	Ldhb	chr6	protein_coding	lactate dehydrogenase B
chr6	142451272	142453266	-	142451272	142453579	A5SS	0.5	50	50	ENSMUST00000239395.2	ENSMUSG00000030246.13	Ldhb	chr6	protein_coding	lactate dehydrogenase B
chr6	142512197	142515732	-	142512231	142515732	A3SS	0.5	50	50	ENSMUST00000203945.3	ENSMUSG00000030247.10	Kcnj8	chr6	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 8
chr6	142592099	142598253	-	142592099;142593791	142593753;142598253	ES	0.5	50	50	ENSMUST00000100827.5	ENSMUSG00000030249.16	Abcc9	chr6	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 9
chr6	142602401	142610258	-	142602401;142604328	142604224;142610258	ES	0.5	50	50	ENSMUST00000100827.5	ENSMUSG00000030249.16	Abcc9	chr6	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 9
chr6	142536229;142539868	142539693;142540435	-	142536229	142540435	cassetteExon	0.5	100	100	ENSMUST00000100827.5	ENSMUSG00000030249.16	Abcc9	chr6	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 9
chr6	142536229	142540435	-	142539868	142540435	3pMXE	0.5	50	50	ENSMUST00000205202.3	ENSMUSG00000030249.16	Abcc9	chr6	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 9
chr6	142702752	142710280	+	142702752;142710155	142710013;142710280	ES	0.5	50	50	ENSMUST00000032419.9	ENSMUSG00000030282.15	Cmas	chr6	protein_coding	cytidine monophospho-N-acetylneuraminic acid synthetase
chr6	142710435	142716249	+	142710435;142713663	142713530;142716249	ES	0.33	50	50	ENSMUST00000032419.9	ENSMUSG00000030282.15	Cmas	chr6	protein_coding	cytidine monophospho-N-acetylneuraminic acid synthetase
chr6	142702752	142716249	+	142702752;142710435	142710280;142716249	ES	0.33	50	50	ENSMUST00000144920.4	ENSMUSG00000030282.15	Cmas	chr6	protein_coding	cytidine monophospho-N-acetylneuraminic acid synthetase
chr6	142702752;142710435	142710013;142716249	+	142702752	142716249	cassetteExon	0.5	100	100	ENSMUST00000204147.2	ENSMUSG00000030282.15	Cmas	chr6	protein_coding	cytidine monophospho-N-acetylneuraminic acid synthetase
chr6	142713663	142716249	+	142702752	142716249	A5SS	0.33	50	50	ENSMUST00000204147.2	ENSMUSG00000030282.15	Cmas	chr6	protein_coding	cytidine monophospho-N-acetylneuraminic acid synthetase
chr6	142736418	142743568	-	142736418;142741133	142741062;142743568	ES	0.5	50	50	ENSMUST00000156662.8	ENSMUSG00000048473.16	Sult6b2	chr6	protein_coding	sulfotransferase family 6B, member 2
chr6	142822483	142828583	-	142822483	142859750	A5SS	0.5	50	50	ENSMUST00000032421.4	ENSMUSG00000030283.8	St8sia1	chr6	protein_coding	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1
chr6	142859894	142909096	-	142859894	142909262	A5SS	0.5	50	50	ENSMUST00000032421.4	ENSMUSG00000030283.8	St8sia1	chr6	protein_coding	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1
chr6	143027154	143036325	-	143027154;143029060	143028889;143036325	ES	0.5	50	50	ENSMUST00000171349.8	ENSMUSG00000030279.16	C2cd5	chr6	protein_coding	C2 calcium-dependent domain containing 5
chr6	142963799;142966100	142966050;142974886	-	142963799	142974886	cassetteExon	0.5	100	100	ENSMUST00000171349.8	ENSMUSG00000030279.16	C2cd5	chr6	protein_coding	C2 calcium-dependent domain containing 5
chr6	142995965;143004937	143004872;143007479	-	142995965	143007479	cassetteExon	0.5	100	100	ENSMUST00000171349.8	ENSMUSG00000030279.16	C2cd5	chr6	protein_coding	C2 calcium-dependent domain containing 5
chr6	143007587;143011944	143011912;143012782	-	143007587	143012782	cassetteExon	0.5	100	100	ENSMUST00000171349.8	ENSMUSG00000030279.16	C2cd5	chr6	protein_coding	C2 calcium-dependent domain containing 5
chr6	143012867;143019513	143019389;143023989	-	143012867;143018420	143018269;143023989	MXE	0.5	100	100	ENSMUST00000171349.8	ENSMUSG00000030279.16	C2cd5	chr6	protein_coding	C2 calcium-dependent domain containing 5
chr6	143018420;143019513	143019314;143023989	-	143018420	143023989	cassetteExon	0.5	100	100	ENSMUST00000171349.8	ENSMUSG00000030279.16	C2cd5	chr6	protein_coding	C2 calcium-dependent domain containing 5
chr6	143018420;143019513	143019389;143023989	-	143018420	143023989	cassetteExon	0.5	100	100	ENSMUST00000171349.8	ENSMUSG00000030279.16	C2cd5	chr6	protein_coding	C2 calcium-dependent domain containing 5
chr6	142963799	142965054	-	142963799	142974886	A5SS	0.33	50	50	ENSMUST00000171349.8	ENSMUSG00000030279.16	C2cd5	chr6	protein_coding	C2 calcium-dependent domain containing 5
chr6	143045522	143045824	-	143045522	143045659	A5SS	0.5	50	50	ENSMUST00000171349.8	ENSMUSG00000030279.16	C2cd5	chr6	protein_coding	C2 calcium-dependent domain containing 5
chr6	143012867;143018420	143018269;143019389	-	143012867	143019389	cassetteExon	0.5	100	100	ENSMUST00000087485.7	ENSMUSG00000030279.16	C2cd5	chr6	protein_coding	C2 calcium-dependent domain containing 5
chr6	142963799;142965155	142965054;142966050	-	142963799	142966050	cassetteExon	0.5	100	100	ENSMUST00000205119.3	ENSMUSG00000030279.16	C2cd5	chr6	protein_coding	C2 calcium-dependent domain containing 5
chr6	143012867	143019389	-	143018420	143019389	3pMXE	0.5	50	50	ENSMUST00000204967.3	ENSMUSG00000030279.16	C2cd5	chr6	protein_coding	C2 calcium-dependent domain containing 5
chr6	143018420	143019314	-	143018420	143019389	A5SS	0.33	50	50	ENSMUST00000204967.3	ENSMUSG00000030279.16	C2cd5	chr6	protein_coding	C2 calcium-dependent domain containing 5
chr6	143027154	143036325	-	143029060	143036325	3pMXE	0.5	50	50	ENSMUST00000205079.2	ENSMUSG00000030279.16	C2cd5	chr6	protein_coding	C2 calcium-dependent domain containing 5
chr6	143143291	143148805	+	143143291	143163323	A3SS	0.5	50	50	ENSMUST00000204947.3	ENSMUSG00000030275.7	Etnk1	chr6	protein_coding	ethanolamine kinase 1
chr6	143143291	143148805	+	143143291	143176559	A3SS	0.33	50	50	ENSMUST00000205256.2	ENSMUSG00000030275.7	Etnk1	chr6	protein_coding	ethanolamine kinase 1
chr6	143143291	143163323	+	143143291	143176559	A3SS	0.33	50	50	ENSMUST00000205256.2	ENSMUSG00000030275.7	Etnk1	chr6	protein_coding	ethanolamine kinase 1
chr6	143193620	143195177	+	143193620	143194608	3pMXE	0.25	50	50	ENSMUST00000159793.8	ENSMUSG00000072679.11	D6Ertd474e	chr6	lncRNA	DNA segment, Chr 6, ERATO Doi 474, expressed
chr6	143193620	143241340	+	143193620	143194608	3pMXE	0.25	50	50	ENSMUST00000159793.8	ENSMUSG00000072679.11	D6Ertd474e	chr6	lncRNA	DNA segment, Chr 6, ERATO Doi 474, expressed
chr6	143193620	143194576	+	143193620	143194608	A3SS	0.25	50	50	ENSMUST00000159793.8	ENSMUSG00000072679.11	D6Ertd474e	chr6	lncRNA	DNA segment, Chr 6, ERATO Doi 474, expressed
chr6	143193620	143195177	+	143193620;143194668	143194576;143195177	ES	0.5	50	50	ENSMUST00000160188.8	ENSMUSG00000072679.11	D6Ertd474e	chr6	lncRNA	DNA segment, Chr 6, ERATO Doi 474, expressed
chr6	143231867	143241340	+	143195409	143241340	A5SS	0.33	50	50	ENSMUST00000160188.8	ENSMUSG00000072679.11	D6Ertd474e	chr6	lncRNA	DNA segment, Chr 6, ERATO Doi 474, expressed
chr6	143193620;143195409	143195177;143241340	+	143193620	143241340	cassetteExon	0.5	100	100	ENSMUST00000161174.4	ENSMUSG00000072679.11	D6Ertd474e	chr6	lncRNA	DNA segment, Chr 6, ERATO Doi 474, expressed
chr6	143193620	143194576	+	143193620	143241340	A3SS	0.25	50	50	ENSMUST00000161174.4	ENSMUSG00000072679.11	D6Ertd474e	chr6	lncRNA	DNA segment, Chr 6, ERATO Doi 474, expressed
chr6	143231867	143241340	+	143193620	143241340	A5SS	0.33	50	50	ENSMUST00000161174.4	ENSMUSG00000072679.11	D6Ertd474e	chr6	lncRNA	DNA segment, Chr 6, ERATO Doi 474, expressed
chr6	143193620;143194668	143194608;143195177	+	143193620	143195177	cassetteExon	0.5	100	100	ENSMUST00000100817.6	ENSMUSG00000072679.11	D6Ertd474e	chr6	lncRNA	DNA segment, Chr 6, ERATO Doi 474, expressed
chr6	143819876	143887077	-	143819876;143853259	143853113;143887077	ES	0.5	50	50	ENSMUST00000038815.14	ENSMUSG00000041540.17	Sox5	chr6	protein_coding	SRY (sex determining region Y)-box 5
chr6	144100949	144380151	-	144100949	144155057	5pMXE	0.25	50	50	ENSMUST00000038815.14	ENSMUSG00000041540.17	Sox5	chr6	protein_coding	SRY (sex determining region Y)-box 5
chr6	143785633	143786900	-	143781138	143786900	A3SS	0.5	50	50	ENSMUST00000038815.14	ENSMUSG00000041540.17	Sox5	chr6	protein_coding	SRY (sex determining region Y)-box 5
chr6	143906646	143968895	-	143906643	143968895	A3SS	0.5	50	50	ENSMUST00000038815.14	ENSMUSG00000041540.17	Sox5	chr6	protein_coding	SRY (sex determining region Y)-box 5
chr6	144051457	144062170	-	143987081	144062170	A3SS	0.5	50	50	ENSMUST00000038815.14	ENSMUSG00000041540.17	Sox5	chr6	protein_coding	SRY (sex determining region Y)-box 5
chr6	143887162	143889473	-	143887162	143906523	A5SS	0.33	50	50	ENSMUST00000038815.14	ENSMUSG00000041540.17	Sox5	chr6	protein_coding	SRY (sex determining region Y)-box 5
chr6	143887162	143892742	-	143887162	143906523	A5SS	0.33	50	50	ENSMUST00000038815.14	ENSMUSG00000041540.17	Sox5	chr6	protein_coding	SRY (sex determining region Y)-box 5
chr6	144062380	144100823	-	144062380	144100718	A5SS	0.5	50	50	ENSMUST00000038815.14	ENSMUSG00000041540.17	Sox5	chr6	protein_coding	SRY (sex determining region Y)-box 5
chr6	144100949	144149520	-	144100949	144155057	A5SS	0.25	50	50	ENSMUST00000038815.14	ENSMUSG00000041540.17	Sox5	chr6	protein_coding	SRY (sex determining region Y)-box 5
chr6	144100949	144149737	-	144100949	144155057	A5SS	0.25	50	50	ENSMUST00000038815.14	ENSMUSG00000041540.17	Sox5	chr6	protein_coding	SRY (sex determining region Y)-box 5
chr6	143891549	143892742	-	143887162	143892742	A3SS	0.5	50	50	ENSMUST00000111748.8	ENSMUSG00000041540.17	Sox5	chr6	protein_coding	SRY (sex determining region Y)-box 5
chr6	143887162	143889473	-	143887162	143892742	A5SS	0.33	50	50	ENSMUST00000111748.8	ENSMUSG00000041540.17	Sox5	chr6	protein_coding	SRY (sex determining region Y)-box 5
chr6	144100949	144149520	-	144100949	144380151	A5SS	0.25	50	50	ENSMUST00000141102.8	ENSMUSG00000041540.17	Sox5	chr6	protein_coding	SRY (sex determining region Y)-box 5
chr6	144100949	144149737	-	144100949	144380151	A5SS	0.25	50	50	ENSMUST00000141102.8	ENSMUSG00000041540.17	Sox5	chr6	protein_coding	SRY (sex determining region Y)-box 5
chr6	143819876	143887077	-	143853259	143887077	3pMXE	0.5	50	50	ENSMUST00000129050.8	ENSMUSG00000041540.17	Sox5	chr6	protein_coding	SRY (sex determining region Y)-box 5
chr6	144100949	144149737	-	144100949	144149520	A5SS	0.25	50	50	ENSMUST00000129050.8	ENSMUSG00000041540.17	Sox5	chr6	protein_coding	SRY (sex determining region Y)-box 5
chr6	144625761	144635665	+	144618818	144635665	A5SS	0.5	50	50	ENSMUST00000139351.8	ENSMUSG00000085785.8	Sox5os3	chr6	lncRNA	SRY (sex determining region Y)-box 5, opposite strand 3
chr6	144993089	145021615	-	144993089	144994289	5pMXE	0.33	50	50	ENSMUST00000032402.12	ENSMUSG00000030268.18	Bcat1	chr6	protein_coding	branched chain aminotransferase 1, cytosolic
chr6	144961578	144964918	-	144961317	144964918	A3SS	0.5	50	50	ENSMUST00000032402.12	ENSMUSG00000030268.18	Bcat1	chr6	protein_coding	branched chain aminotransferase 1, cytosolic
chr6	144980377	144980869	-	144980377	144985161	A5SS	0.5	50	50	ENSMUST00000032402.12	ENSMUSG00000030268.18	Bcat1	chr6	protein_coding	branched chain aminotransferase 1, cytosolic
chr6	144985361	144985923	-	144985361	144993018	A5SS	0.25	50	50	ENSMUST00000032402.12	ENSMUSG00000030268.18	Bcat1	chr6	protein_coding	branched chain aminotransferase 1, cytosolic
chr6	144985361	144986423	-	144985361	144993018	A5SS	0.25	50	50	ENSMUST00000032402.12	ENSMUSG00000030268.18	Bcat1	chr6	protein_coding	branched chain aminotransferase 1, cytosolic
chr6	144985361	144993166	-	144985361	144993018	A5SS&ES	0.25	50	50	ENSMUST00000032402.12	ENSMUSG00000030268.18	Bcat1	chr6	protein_coding	branched chain aminotransferase 1, cytosolic
chr6	144993089	144993166	-	144993089	144994289	A5SS	0.33	50	50	ENSMUST00000032402.12	ENSMUSG00000030268.18	Bcat1	chr6	protein_coding	branched chain aminotransferase 1, cytosolic
chr6	144993089	144993166	-	144993089	145021615	A5SS	0.33	50	50	ENSMUST00000111742.8	ENSMUSG00000030268.18	Bcat1	chr6	protein_coding	branched chain aminotransferase 1, cytosolic
chr6	144985361	144993018	-	144965081	144993018	A3SS	0.5	50	50	ENSMUST00000204138.3	ENSMUSG00000030268.18	Bcat1	chr6	protein_coding	branched chain aminotransferase 1, cytosolic
chr6	144965081	144978509	-	144965081	144993018	A5SS	0.5	50	50	ENSMUST00000204138.3	ENSMUSG00000030268.18	Bcat1	chr6	protein_coding	branched chain aminotransferase 1, cytosolic
chr6	144985361	144993166	-	144985361;144993089	144993018;144993166	ES	0.5	50	50	ENSMUST00000123930.8	ENSMUSG00000030268.18	Bcat1	chr6	protein_coding	branched chain aminotransferase 1, cytosolic
chr6	144985361	144993166	-	144985361	144986423	5pMXE	0.25	50	50	ENSMUST00000155693.8	ENSMUSG00000030268.18	Bcat1	chr6	protein_coding	branched chain aminotransferase 1, cytosolic
chr6	144985361;144986065	144985923;144986423	-	144985361	144986423	cassetteExon	0.5	100	100	ENSMUST00000155693.8	ENSMUSG00000030268.18	Bcat1	chr6	protein_coding	branched chain aminotransferase 1, cytosolic
chr6	144985361	144985923	-	144985361	144993166	A5SS	0.25	50	50	ENSMUST00000149769.6	ENSMUSG00000030268.18	Bcat1	chr6	protein_coding	branched chain aminotransferase 1, cytosolic
chr6	145083333	145083908	+	145083333;145083812	145083772;145083908	ES	0.5	50	50	ENSMUST00000135984.8	ENSMUSG00000030263.14	Lrmp	chr6	protein_coding	lymphoid-restricted membrane protein
chr6	145083989;145090734	145090675;145093362	+	145083989	145093362	cassetteExon	0.5	100	100	ENSMUST00000135984.8	ENSMUSG00000030263.14	Lrmp	chr6	protein_coding	lymphoid-restricted membrane protein
chr6	145067832	145083186	+	145061457	145083186	A5SS	0.5	50	50	ENSMUST00000135984.8	ENSMUSG00000030263.14	Lrmp	chr6	protein_coding	lymphoid-restricted membrane protein
chr6	145091248	145093362	+	145083989	145093362	A5SS	0.33	50	50	ENSMUST00000135984.8	ENSMUSG00000030263.14	Lrmp	chr6	protein_coding	lymphoid-restricted membrane protein
chr6	145103561	145104370	+	145095083	145104370	A5SS	0.5	50	50	ENSMUST00000135984.8	ENSMUSG00000030263.14	Lrmp	chr6	protein_coding	lymphoid-restricted membrane protein
chr6	145083333	145083908	+	145083812	145083908	A5SS	0.5	50	50	ENSMUST00000143631.8	ENSMUSG00000030263.14	Lrmp	chr6	protein_coding	lymphoid-restricted membrane protein
chr6	145091248	145093362	+	145090734	145093362	A5SS	0.33	50	50	ENSMUST00000152571.8	ENSMUSG00000030263.14	Lrmp	chr6	protein_coding	lymphoid-restricted membrane protein
chr6	145148754	145154147	-	145148754	145150968	5pMXE	0.33	50	50	ENSMUST00000111727.8	ENSMUSG00000043541.17	Casc1	chr6	protein_coding	cancer susceptibility candidate 1
chr6	145148754;145149325	145149186;145150968	-	145148754	145150968	cassetteExon	0.5	100	100	ENSMUST00000111727.8	ENSMUSG00000043541.17	Casc1	chr6	protein_coding	cancer susceptibility candidate 1
chr6	145148754	145154147	-	145148754;145151049	145150968;145154147	ES	0.33	50	50	ENSMUST00000111728.8	ENSMUSG00000043541.17	Casc1	chr6	protein_coding	cancer susceptibility candidate 1
chr6	145154164	145156533	-	145154164	145156130	5pMXE	0.5	50	50	ENSMUST00000111728.8	ENSMUSG00000043541.17	Casc1	chr6	protein_coding	cancer susceptibility candidate 1
chr6	145121050;145122011	145121898;145123059	-	145121050	145123059	cassetteExon	0.5	100	100	ENSMUST00000111728.8	ENSMUSG00000043541.17	Casc1	chr6	protein_coding	cancer susceptibility candidate 1
chr6	145151049;145151302	145151170;145154147	-	145151049	145154147	cassetteExon	0.5	100	100	ENSMUST00000111728.8	ENSMUSG00000043541.17	Casc1	chr6	protein_coding	cancer susceptibility candidate 1
chr6	145121050	145121129	-	145121050	145123059	A5SS	0.33	50	50	ENSMUST00000111728.8	ENSMUSG00000043541.17	Casc1	chr6	protein_coding	cancer susceptibility candidate 1
chr6	145121050;145121185	145121129;145121898	-	145121050	145121898	cassetteExon	0.5	100	100	ENSMUST00000060797.10	ENSMUSG00000043541.17	Casc1	chr6	protein_coding	cancer susceptibility candidate 1
chr6	145142678;145151049	145150968;145154147	-	145142678;145148754	145146204;145154147	MXE	0.5	100	100	ENSMUST00000152138.8	ENSMUSG00000043541.17	Casc1	chr6	protein_coding	cancer susceptibility candidate 1
chr6	145142678;145151302	145150968;145154147	-	145142678;145148754	145146204;145154147	MXE	0.5	100	100	ENSMUST00000152138.8	ENSMUSG00000043541.17	Casc1	chr6	protein_coding	cancer susceptibility candidate 1
chr6	145148754;145151302	145150968;145154147	-	145148754	145154147	cassetteExon	0.5	100	100	ENSMUST00000152138.8	ENSMUSG00000043541.17	Casc1	chr6	protein_coding	cancer susceptibility candidate 1
chr6	145148754	145149186	-	145148754	145154147	A5SS	0.33	50	50	ENSMUST00000152138.8	ENSMUSG00000043541.17	Casc1	chr6	protein_coding	cancer susceptibility candidate 1
chr6	145148754	145150968	-	145142678	145150968	A3SS	0.33	50	50	ENSMUST00000133671.8	ENSMUSG00000043541.17	Casc1	chr6	protein_coding	cancer susceptibility candidate 1
chr6	145148754	145154147	-	145151302	145154147	A3SS&ES	0.33	50	50	ENSMUST00000133671.8	ENSMUSG00000043541.17	Casc1	chr6	protein_coding	cancer susceptibility candidate 1
chr6	145149325	145150968	-	145142678	145150968	A3SS	0.33	50	50	ENSMUST00000133671.8	ENSMUSG00000043541.17	Casc1	chr6	protein_coding	cancer susceptibility candidate 1
chr6	145142678	145146204	-	145142678	145150968	A5SS	0.5	50	50	ENSMUST00000133671.8	ENSMUSG00000043541.17	Casc1	chr6	protein_coding	cancer susceptibility candidate 1
chr6	145156970	145160910	+	145157202	145160910	A5SS	0.25	50	50	ENSMUST00000111725.8	ENSMUSG00000040370.14	Etfrf1	chr6	protein_coding	electron transfer flavoprotein regulatory factor 1
chr6	145156978	145160910	+	145157202	145160910	A5SS	0.25	50	50	ENSMUST00000111725.8	ENSMUSG00000040370.14	Etfrf1	chr6	protein_coding	electron transfer flavoprotein regulatory factor 1
chr6	145160510	145160910	+	145157202	145160910	A5SS	0.25	50	50	ENSMUST00000111725.8	ENSMUSG00000040370.14	Etfrf1	chr6	protein_coding	electron transfer flavoprotein regulatory factor 1
chr6	145156978;145160510	145160248;145160910	+	145156978	145160910	cassetteExon	0.5	100	100	ENSMUST00000111726.10	ENSMUSG00000040370.14	Etfrf1	chr6	protein_coding	electron transfer flavoprotein regulatory factor 1
chr6	145156970	145160910	+	145156978	145160910	A5SS	0.25	50	50	ENSMUST00000111726.10	ENSMUSG00000040370.14	Etfrf1	chr6	protein_coding	electron transfer flavoprotein regulatory factor 1
chr6	145156978	145160910	+	145156978	145160248	A3SS	0.5	50	50	ENSMUST00000039729.5	ENSMUSG00000040370.14	Etfrf1	chr6	protein_coding	electron transfer flavoprotein regulatory factor 1
chr6	145156970	145160248	+	145156978	145160248	A5SS	0.5	50	50	ENSMUST00000039729.5	ENSMUSG00000040370.14	Etfrf1	chr6	protein_coding	electron transfer flavoprotein regulatory factor 1
chr6	145156970	145160910	+	145156970	145160248	3pMXE	0.5	50	50	ENSMUST00000126007.2	ENSMUSG00000040370.14	Etfrf1	chr6	protein_coding	electron transfer flavoprotein regulatory factor 1
chr6	145156970	145160910	+	145156970;145160510	145160248;145160910	ES	0.25	50	50	ENSMUST00000111723.8	ENSMUSG00000040370.14	Etfrf1	chr6	protein_coding	electron transfer flavoprotein regulatory factor 1
chr6	145156978	145160910	+	145160510	145160910	A5SS&ES	0.25	50	50	ENSMUST00000111723.8	ENSMUSG00000040370.14	Etfrf1	chr6	protein_coding	electron transfer flavoprotein regulatory factor 1
chr6	145156970	145160910	+	145160510	145160910	A5SS&ES	0.25	50	50	ENSMUST00000111724.8	ENSMUSG00000040370.14	Etfrf1	chr6	protein_coding	electron transfer flavoprotein regulatory factor 1
chr6	145177980	145192421	-	145177980;145180152	145179974;145192421	ES	0.33	50	50	ENSMUST00000032399.12	ENSMUSG00000030265.15	Kras	chr6	protein_coding	Kirsten rat sarcoma viral oncogene homolog
chr6	145166450;145170923	145170800;145177821	-	145166450	145177821	cassetteExon	0.5	100	100	ENSMUST00000032399.12	ENSMUSG00000030265.15	Kras	chr6	protein_coding	Kirsten rat sarcoma viral oncogene homolog
chr6	145192542;145193036	145192923;145195775	-	145192542	145195775	cassetteExon	0.5	100	100	ENSMUST00000032399.12	ENSMUSG00000030265.15	Kras	chr6	protein_coding	Kirsten rat sarcoma viral oncogene homolog
chr6	145166450	145176480	-	145166450	145177821	A5SS	0.25	50	50	ENSMUST00000032399.12	ENSMUSG00000030265.15	Kras	chr6	protein_coding	Kirsten rat sarcoma viral oncogene homolog
chr6	145166450	145192421	-	145166450	145176480	5pMXE	0.25	50	50	ENSMUST00000123972.2	ENSMUSG00000030265.15	Kras	chr6	protein_coding	Kirsten rat sarcoma viral oncogene homolog
chr6	145166450	145170800	-	145166450	145176480	A5SS	0.25	50	50	ENSMUST00000123972.2	ENSMUSG00000030265.15	Kras	chr6	protein_coding	Kirsten rat sarcoma viral oncogene homolog
chr6	145166450;145177980	145177821;145192421	-	145166450	145192421	cassetteExon	0.5	100	100	ENSMUST00000203147.3	ENSMUSG00000030265.15	Kras	chr6	protein_coding	Kirsten rat sarcoma viral oncogene homolog
chr6	145180152	145192421	-	145166450	145192421	A3SS	0.33	50	50	ENSMUST00000203147.3	ENSMUSG00000030265.15	Kras	chr6	protein_coding	Kirsten rat sarcoma viral oncogene homolog
chr6	145166450	145170800	-	145166450	145192421	A5SS	0.25	50	50	ENSMUST00000203147.3	ENSMUSG00000030265.15	Kras	chr6	protein_coding	Kirsten rat sarcoma viral oncogene homolog
chr6	145166450	145177821	-	145166450	145170800	5pMXE	0.25	50	50	ENSMUST00000149314.2	ENSMUSG00000030265.15	Kras	chr6	protein_coding	Kirsten rat sarcoma viral oncogene homolog
chr6	145339998	145343045	-	145325059	145343045	A3SS	0.5	50	50	ENSMUST00000148739.8	ENSMUSG00000054966.14	Lmntd1	chr6	protein_coding	lamin tail domain containing 1
chr6	145528376	145559617	-	145489230	145559617	A3SS	0.5	50	50	ENSMUST00000148739.8	ENSMUSG00000054966.14	Lmntd1	chr6	protein_coding	lamin tail domain containing 1
chr6	145365600	145373005	-	145365600	145489171	A5SS	0.5	50	50	ENSMUST00000148739.8	ENSMUSG00000054966.14	Lmntd1	chr6	protein_coding	lamin tail domain containing 1
chr6	145375856	145379412	-	145375856	145396149	A5SS	0.5	50	50	ENSMUST00000111706.8	ENSMUSG00000054966.14	Lmntd1	chr6	protein_coding	lamin tail domain containing 1
chr6	145333623	145337151	+	145333623	145347826	A3SS	0.5	50	50	ENSMUST00000146858.2	ENSMUSG00000087204.2	1700073E17Rik	chr6	transcribed_processed_pseudogene	RIKEN cDNA 1700073E17 gene
chr6	145336100	145337151	+	145333623	145337151	A5SS	0.5	50	50	ENSMUST00000152419.2	ENSMUSG00000087204.2	1700073E17Rik	chr6	transcribed_processed_pseudogene	RIKEN cDNA 1700073E17 gene
chr6	145696408	145754110	+	145692692	145754110	A5SS	0.5	50	50	ENSMUST00000111704.8	ENSMUSG00000030259.13	Rassf8	chr6	protein_coding	Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
chr6	145809593	145809857	-	145809464	145809857	A3SS	0.5	50	50	ENSMUST00000032386.11	ENSMUSG00000030256.12	Bhlhe41	chr6	protein_coding	basic helix-loop-helix family, member e41
chr6	145880097	145901321	+	145877735	145901321	A5SS	0.33	50	50	ENSMUST00000111702.8	ENSMUSG00000030255.14	Sspn	chr6	protein_coding	sarcospan
chr6	145899485	145901321	+	145877735	145901321	A5SS	0.33	50	50	ENSMUST00000111702.8	ENSMUSG00000030255.14	Sspn	chr6	protein_coding	sarcospan
chr6	145899485	145901321	+	145880097	145901321	A5SS	0.33	50	50	ENSMUST00000032383.14	ENSMUSG00000030255.14	Sspn	chr6	protein_coding	sarcospan
chr6	146328068	146403285	-	146328068;146378255	146378185;146403285	ES	0.5	50	50	ENSMUST00000079573.13	ENSMUSG00000030287.16	Itpr2	chr6	protein_coding	inositol 1,4,5-triphosphate receptor 2
chr6	146319513;146320014	146319916;146324204	-	146319513	146324204	cassetteExon	0.5	100	100	ENSMUST00000079573.13	ENSMUSG00000030287.16	Itpr2	chr6	protein_coding	inositol 1,4,5-triphosphate receptor 2
chr6	146022520	146045607	-	146014036	146045607	A3SS	0.5	50	50	ENSMUST00000079573.13	ENSMUSG00000030287.16	Itpr2	chr6	protein_coding	inositol 1,4,5-triphosphate receptor 2
chr6	146192082	146193023	-	146142743	146193023	A3SS	0.5	50	50	ENSMUST00000079573.13	ENSMUSG00000030287.16	Itpr2	chr6	protein_coding	inositol 1,4,5-triphosphate receptor 2
chr6	146259315	146260792	-	146256257	146260792	A3SS	0.5	50	50	ENSMUST00000079573.13	ENSMUSG00000030287.16	Itpr2	chr6	protein_coding	inositol 1,4,5-triphosphate receptor 2
chr6	146322972	146324204	-	146319513	146324204	A3SS	0.33	50	50	ENSMUST00000079573.13	ENSMUSG00000030287.16	Itpr2	chr6	protein_coding	inositol 1,4,5-triphosphate receptor 2
chr6	146045767	146048536	-	146045767	146058468	A5SS	0.5	50	50	ENSMUST00000079573.13	ENSMUSG00000030287.16	Itpr2	chr6	protein_coding	inositol 1,4,5-triphosphate receptor 2
chr6	146096118	146098350	-	146096118	146125507	A5SS	0.33	50	50	ENSMUST00000079573.13	ENSMUSG00000030287.16	Itpr2	chr6	protein_coding	inositol 1,4,5-triphosphate receptor 2
chr6	146322972	146324204	-	146320014	146324204	A3SS	0.33	50	50	ENSMUST00000053273.15	ENSMUSG00000030287.16	Itpr2	chr6	protein_coding	inositol 1,4,5-triphosphate receptor 2
chr6	146126293	146128989	-	146096118	146128989	A3SS	0.5	50	50	ENSMUST00000203292.2	ENSMUSG00000030287.16	Itpr2	chr6	protein_coding	inositol 1,4,5-triphosphate receptor 2
chr6	146096118	146098350	-	146096118	146128989	A5SS	0.33	50	50	ENSMUST00000203292.2	ENSMUSG00000030287.16	Itpr2	chr6	protein_coding	inositol 1,4,5-triphosphate receptor 2
chr6	146096118	146125507	-	146096118	146128989	A5SS	0.33	50	50	ENSMUST00000203292.2	ENSMUSG00000030287.16	Itpr2	chr6	protein_coding	inositol 1,4,5-triphosphate receptor 2
chr6	146451483;146451662	146451585;146452137	-	146451483	146452137	cassetteExon	0.5	100	100	ENSMUST00000139979.8	ENSMUSG00000040250.15	Ints13	chr6	protein_coding	integrator complex subunit 13
chr6	146456144;146456550	146456426;146457629	-	146456144	146457629	cassetteExon	0.5	100	100	ENSMUST00000203545.3	ENSMUSG00000040250.15	Ints13	chr6	protein_coding	integrator complex subunit 13
chr6	146456144;146456596	146456426;146457629	-	146456144	146457629	cassetteExon	0.5	100	100	ENSMUST00000203545.3	ENSMUSG00000040250.15	Ints13	chr6	protein_coding	integrator complex subunit 13
chr6	146461708;146463115	146463092;146463227	-	146461708	146463227	cassetteExon	0.5	100	100	ENSMUST00000032427.15	ENSMUSG00000040250.15	Ints13	chr6	protein_coding	integrator complex subunit 13
chr6	146456550	146457629	-	146456596	146457629	A3SS	0.33	50	50	ENSMUST00000032427.15	ENSMUSG00000040250.15	Ints13	chr6	protein_coding	integrator complex subunit 13
chr6	146451483	146452137	-	146451483	146451585	5pMXE	0.5	50	50	ENSMUST00000152994.2	ENSMUSG00000040250.15	Ints13	chr6	protein_coding	integrator complex subunit 13
chr6	146456144	146457629	-	146456596	146457629	3pMXE	0.33	50	50	ENSMUST00000131662.2	ENSMUSG00000040250.15	Ints13	chr6	protein_coding	integrator complex subunit 13
chr6	146487316	146491392	+	146487316;146490355	146490238;146491392	ES	0.5	50	50	ENSMUST00000037836.12	ENSMUSG00000040242.15	Fgfr1op2	chr6	protein_coding	FGFR1 oncogene partner 2
chr6	146491534	146496674	+	146491534	146494132	3pMXE	0.5	50	50	ENSMUST00000037836.12	ENSMUSG00000040242.15	Fgfr1op2	chr6	protein_coding	FGFR1 oncogene partner 2
chr6	146479706	146487180	+	146478757	146487180	A5SS	0.5	50	50	ENSMUST00000037836.12	ENSMUSG00000040242.15	Fgfr1op2	chr6	protein_coding	FGFR1 oncogene partner 2
chr6	146489892	146490238	+	146487316	146490238	A5SS	0.5	50	50	ENSMUST00000037836.12	ENSMUSG00000040242.15	Fgfr1op2	chr6	protein_coding	FGFR1 oncogene partner 2
chr6	146491534;146494245	146494132;146496674	+	146491534	146496674	cassetteExon	0.5	100	100	ENSMUST00000067404.13	ENSMUSG00000040242.15	Fgfr1op2	chr6	protein_coding	FGFR1 oncogene partner 2
chr6	146527748	146544126	-	146527748	146535884	5pMXE	0.5	50	50	ENSMUST00000037709.16	ENSMUSG00000040234.17	Tm7sf3	chr6	protein_coding	transmembrane 7 superfamily member 3
chr6	146525212	146527594	-	146521509	146527594	A3SS	0.5	50	50	ENSMUST00000127529.2	ENSMUSG00000040234.17	Tm7sf3	chr6	protein_coding	transmembrane 7 superfamily member 3
chr6	146521509	146523373	-	146521509	146527594	A5SS	0.5	50	50	ENSMUST00000127529.2	ENSMUSG00000040234.17	Tm7sf3	chr6	protein_coding	transmembrane 7 superfamily member 3
chr6	146544150	146550648	+	146544150;146549777	146549663;146550648	ES	0.5	50	50	ENSMUST00000032429.9	ENSMUSG00000030291.13	Med21	chr6	protein_coding	mediator complex subunit 21
chr6	146544150	146549754	+	146544150	146549663	A3SS	0.33	50	50	ENSMUST00000032429.9	ENSMUSG00000030291.13	Med21	chr6	protein_coding	mediator complex subunit 21
chr6	146544150;146549777	146549754;146550648	+	146544150	146550648	cassetteExon	0.5	100	100	ENSMUST00000125539.8	ENSMUSG00000030291.13	Med21	chr6	protein_coding	mediator complex subunit 21
chr6	146544150	146550648	+	146549777	146550648	5pMXE	0.5	50	50	ENSMUST00000075077.3	ENSMUSG00000030291.13	Med21	chr6	protein_coding	mediator complex subunit 21
chr6	146676989	146677071	+	146676989	146677092	A3SS	0.5	50	50	ENSMUST00000001675.14	ENSMUSG00000001630.14	Stk38l	chr6	protein_coding	serine/threonine kinase 38 like
chr6	146627118	146659959	+	146626545	146659959	A5SS	0.5	50	50	ENSMUST00000001675.14	ENSMUSG00000001630.14	Stk38l	chr6	protein_coding	serine/threonine kinase 38 like
chr6	146697647;146704553	146704433;146706934	+	146697647	146706934	cassetteExon	0.5	100	100	ENSMUST00000123444.2	ENSMUSG00000040187.16	Arntl2	chr6	protein_coding	aryl hydrocarbon receptor nuclear translocator-like 2
chr6	146720432	146722102	+	146720432	146722026	A3SS	0.5	50	50	ENSMUST00000111639.8	ENSMUSG00000040187.16	Arntl2	chr6	protein_coding	aryl hydrocarbon receptor nuclear translocator-like 2
chr6	146724193	146724622	+	146724193	146724592	A3SS	0.5	50	50	ENSMUST00000111639.8	ENSMUSG00000040187.16	Arntl2	chr6	protein_coding	aryl hydrocarbon receptor nuclear translocator-like 2
chr6	146729657	146731191	+	146729684	146731191	A5SS	0.5	50	50	ENSMUST00000111639.8	ENSMUSG00000040187.16	Arntl2	chr6	protein_coding	aryl hydrocarbon receptor nuclear translocator-like 2
chr6	146758596	146761412	+	146760474	146761412	A5SS&ES	0.5	50	50	ENSMUST00000032433.9	ENSMUSG00000030292.11	Smco2	chr6	protein_coding	single-pass membrane protein with coiled-coil domains 2
chr6	146763583	146765556	+	146763249	146765556	A5SS	0.5	50	50	ENSMUST00000032433.9	ENSMUSG00000030292.11	Smco2	chr6	protein_coding	single-pass membrane protein with coiled-coil domains 2
chr6	146790181;146819406	146819246;146840404	+	146790181	146840404	cassetteExon	0.5	100	100	ENSMUST00000016631.14	ENSMUSG00000016487.16	Ppfibp1	chr6	protein_coding	PTPRF interacting protein, binding protein 1 (liprin beta 1)
chr6	146897980;146898399	146898307;146899665	+	146897980	146899665	cassetteExon	0.5	100	100	ENSMUST00000016631.14	ENSMUSG00000016487.16	Ppfibp1	chr6	protein_coding	PTPRF interacting protein, binding protein 1 (liprin beta 1)
chr6	146899779;146901192	146901160;146902439	+	146899779	146902439	cassetteExon	0.5	100	100	ENSMUST00000016631.14	ENSMUSG00000016487.16	Ppfibp1	chr6	protein_coding	PTPRF interacting protein, binding protein 1 (liprin beta 1)
chr6	146914016;146914445	146914416;146917720	+	146914016	146917720	cassetteExon	0.5	100	100	ENSMUST00000016631.14	ENSMUSG00000016487.16	Ppfibp1	chr6	protein_coding	PTPRF interacting protein, binding protein 1 (liprin beta 1)
chr6	146917891;146918391	146918359;146920532	+	146917891	146920532	cassetteExon	0.5	100	100	ENSMUST00000016631.14	ENSMUSG00000016487.16	Ppfibp1	chr6	protein_coding	PTPRF interacting protein, binding protein 1 (liprin beta 1)
chr6	146902507	146903692	+	146902500	146903692	A5SS	0.5	50	50	ENSMUST00000016631.14	ENSMUSG00000016487.16	Ppfibp1	chr6	protein_coding	PTPRF interacting protein, binding protein 1 (liprin beta 1)
chr6	146897980	146899665	+	146898399	146899665	A5SS	0.5	50	50	ENSMUST00000126774.2	ENSMUSG00000016487.16	Ppfibp1	chr6	protein_coding	PTPRF interacting protein, binding protein 1 (liprin beta 1)
chr6	146853995	146854384	-	146853998	146854384	A3SS	0.5	50	50	ENSMUST00000036592.15	ENSMUSG00000040163.15	1700034J05Rik	chr6	protein_coding	RIKEN cDNA 1700034J05 gene
chr6	146946140	146947609	+	146944398	146947609	A5SS	0.5	50	50	ENSMUST00000149660.2	ENSMUSG00000040112.10	Mrps35	chr6	protein_coding	mitochondrial ribosomal protein S35
chr6	146961749;146962799	146962703;146962921	+	146961749	146962921	cassetteExon	0.5	100	100	ENSMUST00000036111.10	ENSMUSG00000040112.10	Mrps35	chr6	protein_coding	mitochondrial ribosomal protein S35
chr6	146961749	146962921	+	146961749	146962703	A3SS	0.5	50	50	ENSMUST00000143204.2	ENSMUSG00000040112.10	Mrps35	chr6	protein_coding	mitochondrial ribosomal protein S35
chr6	146961749	146962921	+	146962799	146962921	5pMXE	0.5	50	50	ENSMUST00000123139.2	ENSMUSG00000040112.10	Mrps35	chr6	protein_coding	mitochondrial ribosomal protein S35
chr6	147006993	147009193	+	147003257	147009193	A5SS	0.5	50	50	ENSMUST00000036003.8	ENSMUSG00000040102.11	Klhl42	chr6	protein_coding	kelch-like 42
chr6	147087057	147103762	+	147087057	147107608	A3SS	0.5	50	50	ENSMUST00000151979.8	ENSMUSG00000085600.8	E330012B07Rik	chr6	lncRNA	RIKEN cDNA E330012B07 gene
chr6	147144362	147145137	-	147144362;147144541	147144499;147145137	ES	0.5	50	50	ENSMUST00000153786.2	ENSMUSG00000086021.2	Gm15767	chr6	lncRNA	predicted gene 15767
chr6	147164893	147165413	-	147164893	147165083	A5SS	0.5	50	50	ENSMUST00000052296.9	ENSMUSG00000048776.9	Pthlh	chr6	protein_coding	parathyroid hormone-like peptide
chr6	147377557	147409282	+	147377393	147409282	A5SS	0.5	50	50	ENSMUST00000203659.3	ENSMUSG00000030301.18	Ccdc91	chr6	protein_coding	coiled-coil domain containing 91
chr6	147412400;147434861	147434774;147435527	+	147412400	147435527	cassetteExon	0.5	100	100	ENSMUST00000032441.14	ENSMUSG00000030301.18	Ccdc91	chr6	protein_coding	coiled-coil domain containing 91
chr6	147438978	147444200	+	147438978	147464133	A3SS	0.5	50	50	ENSMUST00000032441.14	ENSMUSG00000030301.18	Ccdc91	chr6	protein_coding	coiled-coil domain containing 91
chr6	147433044	147434774	+	147412400	147434774	A5SS	0.5	50	50	ENSMUST00000156106.2	ENSMUSG00000030301.18	Ccdc91	chr6	protein_coding	coiled-coil domain containing 91
chr6	147596539	147603468	+	147596539;147602782	147602586;147603468	ES	0.5	50	50	ENSMUST00000152737.2	ENSMUSG00000085077.2	1700049E15Rik	chr6	lncRNA	RIKEN cDNA 1700049E15 gene
chr6	148091082	148096693	-	148091082;148092383	148092328;148096693	ES	0.33	50	50	ENSMUST00000136008.8	ENSMUSG00000030304.12	Ergic2	chr6	protein_coding	ERGIC and golgi 2
chr6	148104040	148108031	-	148104040;148106382	148106274;148108031	ES	0.33	50	50	ENSMUST00000136008.8	ENSMUSG00000030304.12	Ergic2	chr6	protein_coding	ERGIC and golgi 2
chr6	148084706;148088745	148088713;148089531	-	148084706	148089531	cassetteExon	0.5	100	100	ENSMUST00000136008.8	ENSMUSG00000030304.12	Ergic2	chr6	protein_coding	ERGIC and golgi 2
chr6	148091082;148092521	148092417;148096693	-	148091082;148092383	148092328;148096693	MXE	0.5	100	100	ENSMUST00000136008.8	ENSMUSG00000030304.12	Ergic2	chr6	protein_coding	ERGIC and golgi 2
chr6	148106382;148107708	148107598;148108031	-	148106382	148108031	cassetteExon	0.5	100	100	ENSMUST00000136008.8	ENSMUSG00000030304.12	Ergic2	chr6	protein_coding	ERGIC and golgi 2
chr6	148085672	148089531	-	148084706	148089531	A3SS	0.33	50	50	ENSMUST00000136008.8	ENSMUSG00000030304.12	Ergic2	chr6	protein_coding	ERGIC and golgi 2
chr6	148089598	148090984	-	148089628	148090984	A3SS	0.5	50	50	ENSMUST00000136008.8	ENSMUSG00000030304.12	Ergic2	chr6	protein_coding	ERGIC and golgi 2
chr6	148103037	148103994	-	148102984	148103994	A3SS	0.5	50	50	ENSMUST00000136008.8	ENSMUSG00000030304.12	Ergic2	chr6	protein_coding	ERGIC and golgi 2
chr6	148104623	148106274	-	148104040	148106274	A3SS	0.5	50	50	ENSMUST00000136008.8	ENSMUSG00000030304.12	Ergic2	chr6	protein_coding	ERGIC and golgi 2
chr6	148083468	148084587	-	148083468	148084544	A5SS	0.5	50	50	ENSMUST00000136008.8	ENSMUSG00000030304.12	Ergic2	chr6	protein_coding	ERGIC and golgi 2
chr6	148107708	148108031	-	148104040	148108031	A3SS	0.33	50	50	ENSMUST00000032446.12	ENSMUSG00000030304.12	Ergic2	chr6	protein_coding	ERGIC and golgi 2
chr6	148085672	148089531	-	148088745	148089531	A3SS&ES	0.33	50	50	ENSMUST00000143282.8	ENSMUSG00000030304.12	Ergic2	chr6	protein_coding	ERGIC and golgi 2
chr6	148091082;148092521	148092328;148096693	-	148091082	148096693	cassetteExon	0.5	100	100	ENSMUST00000140311.8	ENSMUSG00000030304.12	Ergic2	chr6	protein_coding	ERGIC and golgi 2
chr6	148091082;148092521	148092417;148096693	-	148091082	148096693	cassetteExon	0.5	100	100	ENSMUST00000140311.8	ENSMUSG00000030304.12	Ergic2	chr6	protein_coding	ERGIC and golgi 2
chr6	148091082	148092328	-	148091082	148092417	A5SS	0.33	50	50	ENSMUST00000134574.8	ENSMUSG00000030304.12	Ergic2	chr6	protein_coding	ERGIC and golgi 2
chr6	148091082	148096693	-	148091082	148092417	A5SS&ES	0.33	50	50	ENSMUST00000134574.8	ENSMUSG00000030304.12	Ergic2	chr6	protein_coding	ERGIC and golgi 2
chr6	148092521	148096693	-	148092521	148096697	A5SS	0.5	50	50	ENSMUST00000134574.8	ENSMUSG00000030304.12	Ergic2	chr6	protein_coding	ERGIC and golgi 2
chr6	148091082	148096693	-	148092521	148096693	3pMXE	0.33	50	50	ENSMUST00000145162.2	ENSMUSG00000030304.12	Ergic2	chr6	protein_coding	ERGIC and golgi 2
chr6	148092383	148096693	-	148092521	148096693	3pMXE	0.33	50	50	ENSMUST00000145162.2	ENSMUSG00000030304.12	Ergic2	chr6	protein_coding	ERGIC and golgi 2
chr6	148173017	148196013	-	148173017;148186468	148186355;148196013	ES	0.5	50	50	ENSMUST00000060095.15	ENSMUSG00000030306.15	Tmtc1	chr6	protein_coding	transmembrane and tetratricopeptide repeat containing 1
chr6	148164389;148171561	148171473;148172874	-	148164389	148172874	cassetteExon	0.5	100	100	ENSMUST00000060095.15	ENSMUSG00000030306.15	Tmtc1	chr6	protein_coding	transmembrane and tetratricopeptide repeat containing 1
chr6	148327482	148343028	-	148327482	148345399	A5SS	0.5	50	50	ENSMUST00000060095.15	ENSMUSG00000030306.15	Tmtc1	chr6	protein_coding	transmembrane and tetratricopeptide repeat containing 1
chr6	148706219	148711378	-	148706219;148708017	148707883;148711378	ES	0.5	50	50	ENSMUST00000048418.14	ENSMUSG00000040029.16	Ipo8	chr6	protein_coding	importin 8
chr6	148674304	148676475	-	148674307	148676475	A3SS	0.5	50	50	ENSMUST00000048418.14	ENSMUSG00000040029.16	Ipo8	chr6	protein_coding	importin 8
chr6	148725954	148732662	-	148725983	148732662	A3SS	0.5	50	50	ENSMUST00000048418.14	ENSMUSG00000040029.16	Ipo8	chr6	protein_coding	importin 8
chr6	148718139	148719197	-	148718139	148719462	A5SS	0.5	50	50	ENSMUST00000048418.14	ENSMUSG00000040029.16	Ipo8	chr6	protein_coding	importin 8
chr6	148749789	148760099	-	148749789;148752941	148752773;148760099	ES	0.5	50	50	ENSMUST00000111569.9	ENSMUSG00000030309.17	Caprin2	chr6	protein_coding	caprin family member 2
chr6	148767450	148772111	-	148767450;148771143	148770487;148772111	ES	0.5	50	50	ENSMUST00000111569.9	ENSMUSG00000030309.17	Caprin2	chr6	protein_coding	caprin family member 2
chr6	148744552	148746670	-	148744896	148746670	A3SS	0.33	50	50	ENSMUST00000111569.9	ENSMUSG00000030309.17	Caprin2	chr6	protein_coding	caprin family member 2
chr6	148746174	148746670	-	148744896	148746670	A3SS	0.33	50	50	ENSMUST00000111569.9	ENSMUSG00000030309.17	Caprin2	chr6	protein_coding	caprin family member 2
chr6	148789288	148792107	-	148785032	148792107	A3SS	0.5	50	50	ENSMUST00000111569.9	ENSMUSG00000030309.17	Caprin2	chr6	protein_coding	caprin family member 2
chr6	148795734	148796435	-	148792169	148796435	A3SS	0.5	50	50	ENSMUST00000111569.9	ENSMUSG00000030309.17	Caprin2	chr6	protein_coding	caprin family member 2
chr6	148796704	148797516	-	148796654	148797516	A3SS	0.5	50	50	ENSMUST00000111569.9	ENSMUSG00000030309.17	Caprin2	chr6	protein_coding	caprin family member 2
chr6	148749789	148760099	-	148749789	148752773	5pMXE	0.5	50	50	ENSMUST00000127941.8	ENSMUSG00000030309.17	Caprin2	chr6	protein_coding	caprin family member 2
chr6	148746174	148746670	-	148744552	148746670	A3SS	0.33	50	50	ENSMUST00000127941.8	ENSMUSG00000030309.17	Caprin2	chr6	protein_coding	caprin family member 2
chr6	148771143	148772111	-	148767450	148772111	A3SS	0.5	50	50	ENSMUST00000072324.12	ENSMUSG00000030309.17	Caprin2	chr6	protein_coding	caprin family member 2
chr6	148767450	148770487	-	148767450	148772111	A5SS	0.5	50	50	ENSMUST00000072324.12	ENSMUSG00000030309.17	Caprin2	chr6	protein_coding	caprin family member 2
chr6	148830133	148834500	-	148830133;148832148	148832049;148834500	ES	0.5	50	50	ENSMUST00000054080.15	ENSMUSG00000039985.15	Sinhcaf	chr6	protein_coding	SIN3-HDAC complex associated factor
chr6	148834646;148843520	148843176;148847790	-	148834646	148847790	cassetteExon	0.5	100	100	ENSMUST00000054080.15	ENSMUSG00000039985.15	Sinhcaf	chr6	protein_coding	SIN3-HDAC complex associated factor
chr6	148834646;148843520	148843431;148847790	-	148834646	148847790	cassetteExon	0.5	100	100	ENSMUST00000054080.15	ENSMUSG00000039985.15	Sinhcaf	chr6	protein_coding	SIN3-HDAC complex associated factor
chr6	148827603	148830007	-	148827661	148830007	A3SS	0.5	50	50	ENSMUST00000054080.15	ENSMUSG00000039985.15	Sinhcaf	chr6	protein_coding	SIN3-HDAC complex associated factor
chr6	148845937	148847790	-	148834646	148847790	A3SS	0.33	50	50	ENSMUST00000054080.15	ENSMUSG00000039985.15	Sinhcaf	chr6	protein_coding	SIN3-HDAC complex associated factor
chr6	148834646	148839238	-	148834646	148847790	A5SS	0.14	50	50	ENSMUST00000054080.15	ENSMUSG00000039985.15	Sinhcaf	chr6	protein_coding	SIN3-HDAC complex associated factor
chr6	148834646	148846087	-	148834646	148847790	A5SS	0.14	50	50	ENSMUST00000054080.15	ENSMUSG00000039985.15	Sinhcaf	chr6	protein_coding	SIN3-HDAC complex associated factor
chr6	148834646	148846248	-	148834646	148847790	A5SS	0.14	50	50	ENSMUST00000054080.15	ENSMUSG00000039985.15	Sinhcaf	chr6	protein_coding	SIN3-HDAC complex associated factor
chr6	148834646	148847545	-	148834646	148847790	A5SS	0.14	50	50	ENSMUST00000054080.15	ENSMUSG00000039985.15	Sinhcaf	chr6	protein_coding	SIN3-HDAC complex associated factor
chr6	148834646	148843176	-	148834646	148839238	A5SS&ES	0.33	50	50	ENSMUST00000204435.3	ENSMUSG00000039985.15	Sinhcaf	chr6	protein_coding	SIN3-HDAC complex associated factor
chr6	148834646	148843431	-	148834646	148839238	A5SS&ES	0.33	50	50	ENSMUST00000204435.3	ENSMUSG00000039985.15	Sinhcaf	chr6	protein_coding	SIN3-HDAC complex associated factor
chr6	148834646	148847545	-	148834646	148846087	5pMXE	0.14	50	50	ENSMUST00000081956.12	ENSMUSG00000039985.15	Sinhcaf	chr6	protein_coding	SIN3-HDAC complex associated factor
chr6	148834646	148839238	-	148834646	148846087	A5SS	0.14	50	50	ENSMUST00000081956.12	ENSMUSG00000039985.15	Sinhcaf	chr6	protein_coding	SIN3-HDAC complex associated factor
chr6	148834646	148843176	-	148834646	148846087	A5SS	0.14	50	50	ENSMUST00000081956.12	ENSMUSG00000039985.15	Sinhcaf	chr6	protein_coding	SIN3-HDAC complex associated factor
chr6	148834646	148843431	-	148834646	148846087	A5SS	0.14	50	50	ENSMUST00000081956.12	ENSMUSG00000039985.15	Sinhcaf	chr6	protein_coding	SIN3-HDAC complex associated factor
chr6	148834646	148846248	-	148834646	148846087	A5SS	0.14	50	50	ENSMUST00000081956.12	ENSMUSG00000039985.15	Sinhcaf	chr6	protein_coding	SIN3-HDAC complex associated factor
chr6	148834646	148847545	-	148834646	148846248	5pMXE	0.14	50	50	ENSMUST00000111562.8	ENSMUSG00000039985.15	Sinhcaf	chr6	protein_coding	SIN3-HDAC complex associated factor
chr6	148834646	148839238	-	148834646	148846248	A5SS	0.14	50	50	ENSMUST00000111562.8	ENSMUSG00000039985.15	Sinhcaf	chr6	protein_coding	SIN3-HDAC complex associated factor
chr6	148834646	148843176	-	148834646	148846248	A5SS	0.14	50	50	ENSMUST00000111562.8	ENSMUSG00000039985.15	Sinhcaf	chr6	protein_coding	SIN3-HDAC complex associated factor
chr6	148834646	148843431	-	148834646	148846248	A5SS	0.14	50	50	ENSMUST00000111562.8	ENSMUSG00000039985.15	Sinhcaf	chr6	protein_coding	SIN3-HDAC complex associated factor
chr6	148834646	148839238	-	148834646	148847545	A5SS	0.14	50	50	ENSMUST00000132696.8	ENSMUSG00000039985.15	Sinhcaf	chr6	protein_coding	SIN3-HDAC complex associated factor
chr6	148834646	148843176	-	148834646	148847545	A5SS	0.14	50	50	ENSMUST00000132696.8	ENSMUSG00000039985.15	Sinhcaf	chr6	protein_coding	SIN3-HDAC complex associated factor
chr6	148834646	148843431	-	148834646	148847545	A5SS	0.14	50	50	ENSMUST00000132696.8	ENSMUSG00000039985.15	Sinhcaf	chr6	protein_coding	SIN3-HDAC complex associated factor
chr6	148845937	148847790	-	148843520	148847790	A3SS	0.33	50	50	ENSMUST00000139355.8	ENSMUSG00000039985.15	Sinhcaf	chr6	protein_coding	SIN3-HDAC complex associated factor
chr6	148834646	148843431	-	148834646	148843176	A5SS&ES	0.14	50	50	ENSMUST00000139355.8	ENSMUSG00000039985.15	Sinhcaf	chr6	protein_coding	SIN3-HDAC complex associated factor
chr6	148830133	148834500	-	148832148	148834500	3pMXE	0.5	50	50	ENSMUST00000146457.2	ENSMUSG00000039985.15	Sinhcaf	chr6	protein_coding	SIN3-HDAC complex associated factor
chr6	148982413;148986434	148986369;149002681	-	148982413	149002681	cassetteExon	0.5	100	100	ENSMUST00000111557.8	ENSMUSG00000030313.16	Dennd5b	chr6	protein_coding	DENN/MADD domain containing 5B
chr6	149044213	149045513	+	149044213	149045532	A3SS	0.5	50	50	ENSMUST00000126406.8	ENSMUSG00000039958.18	Etfbkmt	chr6	protein_coding	electron transfer flavoprotein beta subunit lysine methyltransferase
chr6	149043202	149044104	+	149041461	149044104	A5SS	0.5	50	50	ENSMUST00000126406.8	ENSMUSG00000039958.18	Etfbkmt	chr6	protein_coding	electron transfer flavoprotein beta subunit lysine methyltransferase
chr6	149043202	149045532	+	149044213	149045532	A5SS&ES	0.5	50	50	ENSMUST00000126406.8	ENSMUSG00000039958.18	Etfbkmt	chr6	protein_coding	electron transfer flavoprotein beta subunit lysine methyltransferase
chr6	149043202	149048656	+	149043202;149045940	149045513;149048656	ES	0.5	50	50	ENSMUST00000179873.8	ENSMUSG00000039958.18	Etfbkmt	chr6	protein_coding	electron transfer flavoprotein beta subunit lysine methyltransferase
chr6	149043202;149044213	149044104;149045513	+	149043202	149045513	cassetteExon	0.5	100	100	ENSMUST00000179873.8	ENSMUSG00000039958.18	Etfbkmt	chr6	protein_coding	electron transfer flavoprotein beta subunit lysine methyltransferase
chr6	149043202	149045532	+	149043202	149045513	A3SS	0.25	50	50	ENSMUST00000179873.8	ENSMUSG00000039958.18	Etfbkmt	chr6	protein_coding	electron transfer flavoprotein beta subunit lysine methyltransferase
chr6	149043202	149048656	+	149043202;149045940	149045532;149048656	ES	0.5	50	50	ENSMUST00000047531.16	ENSMUSG00000039958.18	Etfbkmt	chr6	protein_coding	electron transfer flavoprotein beta subunit lysine methyltransferase
chr6	149043202;149044213	149044104;149045532	+	149043202	149045532	cassetteExon	0.5	100	100	ENSMUST00000047531.16	ENSMUSG00000039958.18	Etfbkmt	chr6	protein_coding	electron transfer flavoprotein beta subunit lysine methyltransferase
chr6	149043202	149045513	+	149043202	149044104	A3SS&ES	0.33	50	50	ENSMUST00000111548.8	ENSMUSG00000039958.18	Etfbkmt	chr6	protein_coding	electron transfer flavoprotein beta subunit lysine methyltransferase
chr6	149043202	149048656	+	149043202	149045532	3pMXE	0.25	50	50	ENSMUST00000111547.2	ENSMUSG00000039958.18	Etfbkmt	chr6	protein_coding	electron transfer flavoprotein beta subunit lysine methyltransferase
chr6	149043202	149044104	+	149043202	149048656	A3SS	0.25	50	50	ENSMUST00000147934.4	ENSMUSG00000039958.18	Etfbkmt	chr6	protein_coding	electron transfer flavoprotein beta subunit lysine methyltransferase
chr6	149043202	149045532	+	149043202	149044104	A3SS&ES	0.25	50	50	ENSMUST00000111551.2	ENSMUSG00000039958.18	Etfbkmt	chr6	protein_coding	electron transfer flavoprotein beta subunit lysine methyltransferase
chr6	149059329	149070946	-	149059329;149068415	149068304;149070946	ES	0.5	50	50	ENSMUST00000111535.8	ENSMUSG00000068250.14	Amn1	chr6	protein_coding	antagonist of mitotic exit network 1
chr6	149085036	149090104	-	149085036;149086622	149086490;149090104	ES	0.33	50	50	ENSMUST00000111535.8	ENSMUSG00000068250.14	Amn1	chr6	protein_coding	antagonist of mitotic exit network 1
chr6	149068415;149070902	149070801;149072331	-	149068415;149071002	149070946;149072331	MXE	0.5	100	100	ENSMUST00000111535.8	ENSMUSG00000068250.14	Amn1	chr6	protein_coding	antagonist of mitotic exit network 1
chr6	149072548	149089734	-	149072548	149084892	A5SS&ES	0.33	50	50	ENSMUST00000111535.8	ENSMUSG00000068250.14	Amn1	chr6	protein_coding	antagonist of mitotic exit network 1
chr6	149086622	149089734	-	149086622	149090104	A5SS	0.33	50	50	ENSMUST00000111535.8	ENSMUSG00000068250.14	Amn1	chr6	protein_coding	antagonist of mitotic exit network 1
chr6	149086622	149089970	-	149086622	149090104	A5SS	0.33	50	50	ENSMUST00000111535.8	ENSMUSG00000068250.14	Amn1	chr6	protein_coding	antagonist of mitotic exit network 1
chr6	149086622	149089734	-	149072548	149089734	A3SS	0.5	50	50	ENSMUST00000150610.8	ENSMUSG00000068250.14	Amn1	chr6	protein_coding	antagonist of mitotic exit network 1
chr6	149072548	149090104	-	149072548	149089734	A5SS	0.33	50	50	ENSMUST00000150610.8	ENSMUSG00000068250.14	Amn1	chr6	protein_coding	antagonist of mitotic exit network 1
chr6	149072548	149090104	-	149072548	149084892	A5SS&ES	0.33	50	50	ENSMUST00000095319.10	ENSMUSG00000068250.14	Amn1	chr6	protein_coding	antagonist of mitotic exit network 1
chr6	149085036	149090104	-	149085036	149086490	A5SS&ES	0.5	50	50	ENSMUST00000095319.10	ENSMUSG00000068250.14	Amn1	chr6	protein_coding	antagonist of mitotic exit network 1
chr6	149086622	149089970	-	149086622	149089734	A5SS	0.33	50	50	ENSMUST00000095319.10	ENSMUSG00000068250.14	Amn1	chr6	protein_coding	antagonist of mitotic exit network 1
chr6	149070902	149072331	-	149071002	149072331	A3SS&ES	0.5	50	50	ENSMUST00000134181.8	ENSMUSG00000068250.14	Amn1	chr6	protein_coding	antagonist of mitotic exit network 1
chr6	149059329;149071002	149070946;149072331	-	149059329;149070902	149068304;149072331	MXE	0.5	100	100	ENSMUST00000156864.7	ENSMUSG00000068250.14	Amn1	chr6	protein_coding	antagonist of mitotic exit network 1
chr6	149059329	149070946	-	149068415	149070946	3pMXE	0.5	50	50	ENSMUST00000204681.3	ENSMUSG00000068250.14	Amn1	chr6	protein_coding	antagonist of mitotic exit network 1
chr6	149072548;149085036	149084892;149090104	-	149072548	149090104	cassetteExon	0.5	100	100	ENSMUST00000204681.3	ENSMUSG00000068250.14	Amn1	chr6	protein_coding	antagonist of mitotic exit network 1
chr6	149086622	149090104	-	149072548	149090104	A3SS	0.33	50	50	ENSMUST00000204681.3	ENSMUSG00000068250.14	Amn1	chr6	protein_coding	antagonist of mitotic exit network 1
chr6	149211875	149226230	+	149211875;149219206	149219133;149226230	ES	0.33	50	50	ENSMUST00000130664.8	ENSMUSG00000032712.17	Resf1	chr6	protein_coding	retroelement silencing factor 1
chr6	149219206	149226903	+	149219206;149226298	149226230;149226903	ES	0.25	50	50	ENSMUST00000130664.8	ENSMUSG00000032712.17	Resf1	chr6	protein_coding	retroelement silencing factor 1
chr6	149211875;149213104	149212981;149226230	+	149211875;149219206	149219133;149226230	MXE	0.5	100	100	ENSMUST00000130664.8	ENSMUSG00000032712.17	Resf1	chr6	protein_coding	retroelement silencing factor 1
chr6	149211857	149226903	+	149226298	149226903	A5SS&ES	0.25	50	50	ENSMUST00000130664.8	ENSMUSG00000032712.17	Resf1	chr6	protein_coding	retroelement silencing factor 1
chr6	149211875;149219206	149219133;149226903	+	149211875	149226903	cassetteExon	0.5	100	100	ENSMUST00000046689.13	ENSMUSG00000032712.17	Resf1	chr6	protein_coding	retroelement silencing factor 1
chr6	149211875;149226298	149226230;149226903	+	149211875	149226903	cassetteExon	0.5	100	100	ENSMUST00000046689.13	ENSMUSG00000032712.17	Resf1	chr6	protein_coding	retroelement silencing factor 1
chr6	149211875	149212981	+	149211875	149226903	A3SS	0.25	50	50	ENSMUST00000046689.13	ENSMUSG00000032712.17	Resf1	chr6	protein_coding	retroelement silencing factor 1
chr6	149231282	149232930	+	149231282	149232924	A3SS	0.5	50	50	ENSMUST00000046689.13	ENSMUSG00000032712.17	Resf1	chr6	protein_coding	retroelement silencing factor 1
chr6	149211857	149226903	+	149211875	149226903	A5SS	0.25	50	50	ENSMUST00000046689.13	ENSMUSG00000032712.17	Resf1	chr6	protein_coding	retroelement silencing factor 1
chr6	149211875;149226298	149226230;149226903	+	149211875;149219206	149219133;149226903	MXE	0.5	100	100	ENSMUST00000190785.7	ENSMUSG00000032712.17	Resf1	chr6	protein_coding	retroelement silencing factor 1
chr6	149211875	149212981	+	149211875	149219133	A3SS	0.25	50	50	ENSMUST00000190785.7	ENSMUSG00000032712.17	Resf1	chr6	protein_coding	retroelement silencing factor 1
chr6	149211857	149226903	+	149219206	149226903	A5SS&ES	0.25	50	50	ENSMUST00000190785.7	ENSMUSG00000032712.17	Resf1	chr6	protein_coding	retroelement silencing factor 1
chr6	149211875;149213104	149212981;149226230	+	149211875	149226230	cassetteExon	0.5	100	100	ENSMUST00000100765.11	ENSMUSG00000032712.17	Resf1	chr6	protein_coding	retroelement silencing factor 1
chr6	149211875;149219206	149219133;149226903	+	149211875;149226298	149212981;149226903	MXE	0.5	100	100	ENSMUST00000185930.2	ENSMUSG00000032712.17	Resf1	chr6	protein_coding	retroelement silencing factor 1
chr6	149211875	149226903	+	149219206	149226903	5pMXE	0.25	50	50	ENSMUST00000127680.2	ENSMUSG00000032712.17	Resf1	chr6	protein_coding	retroelement silencing factor 1
chr6	149211875	149226903	+	149226298	149226903	5pMXE	0.25	50	50	ENSMUST00000187881.2	ENSMUSG00000032712.17	Resf1	chr6	protein_coding	retroelement silencing factor 1
chr6	149219206	149226903	+	149226298	149226903	5pMXE	0.25	50	50	ENSMUST00000187881.2	ENSMUSG00000032712.17	Resf1	chr6	protein_coding	retroelement silencing factor 1
chr6	149420611	149458142	+	149420611;149451923	149451848;149458142	ES	0.5	50	50	ENSMUST00000086829.11	ENSMUSG00000003452.16	Bicd1	chr6	protein_coding	BICD cargo adaptor 1
chr6	149420611;149422044	149421851;149451848	+	149420611	149451848	cassetteExon	0.5	100	100	ENSMUST00000086829.11	ENSMUSG00000003452.16	Bicd1	chr6	protein_coding	BICD cargo adaptor 1
chr6	149420611;149422044	149421879;149451848	+	149420611	149451848	cassetteExon	0.5	100	100	ENSMUST00000086829.11	ENSMUSG00000003452.16	Bicd1	chr6	protein_coding	BICD cargo adaptor 1
chr6	149420611	149421851	+	149420611	149458142	A3SS	0.25	50	50	ENSMUST00000111513.9	ENSMUSG00000003452.16	Bicd1	chr6	protein_coding	BICD cargo adaptor 1
chr6	149420611	149421879	+	149420611	149458142	A3SS	0.25	50	50	ENSMUST00000111513.9	ENSMUSG00000003452.16	Bicd1	chr6	protein_coding	BICD cargo adaptor 1
chr6	149420611	149421851	+	149420721	149421851	A5SS	0.5	50	50	ENSMUST00000003544.14	ENSMUSG00000003452.16	Bicd1	chr6	protein_coding	BICD cargo adaptor 1
chr6	149420611	149451848	+	149422044	149451848	A5SS&ES	0.5	50	50	ENSMUST00000003544.14	ENSMUSG00000003452.16	Bicd1	chr6	protein_coding	BICD cargo adaptor 1
chr6	149420611	149458142	+	149451923	149458142	A5SS&ES	0.5	50	50	ENSMUST00000003544.14	ENSMUSG00000003452.16	Bicd1	chr6	protein_coding	BICD cargo adaptor 1
chr6	149420611	149421879	+	149420611	149421851	A3SS	0.25	50	50	ENSMUST00000173408.8	ENSMUSG00000003452.16	Bicd1	chr6	protein_coding	BICD cargo adaptor 1
chr6	149420611	149451848	+	149420611	149421879	3pMXE	0.25	50	50	ENSMUST00000172926.2	ENSMUSG00000003452.16	Bicd1	chr6	protein_coding	BICD cargo adaptor 1
chr7	3208269;3208497	3208395;3208595	-	3208269	3208595	cassetteExon	0.5	100	100	ENSMUST00000205185.2	ENSMUSG00000054753.10	AU018091	chr7	protein_coding	expressed sequence AU018091
chr7	3214124	3218841	-	3214127	3218841	A3SS	0.5	50	50	ENSMUST00000171749.3	ENSMUSG00000054753.10	AU018091	chr7	protein_coding	expressed sequence AU018091
chr7	3341815	3352368	+	3341815	3345238	3pMXE	0.5	50	50	ENSMUST00000203328.4	ENSMUSG00000068566.14	Myadm	chr7	protein_coding	myeloid-associated differentiation marker
chr7	3339155	3341728	+	3337850	3341728	A5SS	0.25	50	50	ENSMUST00000203328.4	ENSMUSG00000068566.14	Myadm	chr7	protein_coding	myeloid-associated differentiation marker
chr7	3339317	3341728	+	3337850	3341728	A5SS	0.25	50	50	ENSMUST00000203328.4	ENSMUSG00000068566.14	Myadm	chr7	protein_coding	myeloid-associated differentiation marker
chr7	3340070	3341728	+	3337850	3341728	A5SS	0.25	50	50	ENSMUST00000203328.4	ENSMUSG00000068566.14	Myadm	chr7	protein_coding	myeloid-associated differentiation marker
chr7	3339317	3341728	+	3339155	3341728	A5SS	0.25	50	50	ENSMUST00000096744.8	ENSMUSG00000068566.14	Myadm	chr7	protein_coding	myeloid-associated differentiation marker
chr7	3340070	3341728	+	3339155	3341728	A5SS	0.25	50	50	ENSMUST00000096744.8	ENSMUSG00000068566.14	Myadm	chr7	protein_coding	myeloid-associated differentiation marker
chr7	3340070	3341728	+	3339317	3341728	A5SS	0.25	50	50	ENSMUST00000203566.3	ENSMUSG00000068566.14	Myadm	chr7	protein_coding	myeloid-associated differentiation marker
chr7	3353942	3359352	+	3353942;3359191	3359080;3359352	ES	0.5	50	50	ENSMUST00000100301.11	ENSMUSG00000078816.11	Prkcg	chr7	protein_coding	protein kinase C, gamma
chr7	3363057	3368047	+	3363057;3367528	3367376;3368047	ES	0.5	50	50	ENSMUST00000100301.11	ENSMUSG00000078816.11	Prkcg	chr7	protein_coding	protein kinase C, gamma
chr7	3363057	3368047	+	3363057	3367376	3pMXE	0.5	50	50	ENSMUST00000203081.2	ENSMUSG00000078816.11	Prkcg	chr7	protein_coding	protein kinase C, gamma
chr7	3479028	3483218	+	3479028;3480472	3480335;3483218	ES	0.5	50	50	ENSMUST00000183200.8	ENSMUSG00000078815.9	Cacng6	chr7	protein_coding	calcium channel, voltage-dependent, gamma subunit 6
chr7	3546231	3550948	-	3546231;3546747	3546712;3550948	ES	0.5	50	50	ENSMUST00000203020.3	ENSMUSG00000053338.10	Tarm1	chr7	protein_coding	T cell-interacting, activating receptor on myeloid cells 1
chr7	3614712	3618483	-	3614882	3618483	A3SS	0.5	50	50	ENSMUST00000039507.15	ENSMUSG00000054594.14	Oscar	chr7	protein_coding	osteoclast associated receptor
chr7	3614882	3619040	-	3614882	3618483	A5SS&ES	0.5	50	50	ENSMUST00000039507.15	ENSMUSG00000054594.14	Oscar	chr7	protein_coding	osteoclast associated receptor
chr7	3618515	3619040	-	3618515	3619022	A5SS	0.5	50	50	ENSMUST00000039507.15	ENSMUSG00000054594.14	Oscar	chr7	protein_coding	osteoclast associated receptor
chr7	3614882	3619040	-	3614882;3618515	3618483;3619040	ES	0.5	50	50	ENSMUST00000108645.8	ENSMUSG00000054594.14	Oscar	chr7	protein_coding	osteoclast associated receptor
chr7	3614882	3619040	-	3618515	3619040	A3SS&ES	0.5	50	50	ENSMUST00000148645.2	ENSMUSG00000054594.14	Oscar	chr7	protein_coding	osteoclast associated receptor
chr7	3620690;3621139	3620902;3622429	+	3620690	3622429	cassetteExon	0.5	100	100	ENSMUST00000076657.11	ENSMUSG00000035674.14	Ndufa3	chr7	protein_coding	NADH:ubiquinone oxidoreductase subunit A3
chr7	3622506	3622952	+	3622506	3623000	A3SS	0.5	50	50	ENSMUST00000076657.11	ENSMUSG00000035674.14	Ndufa3	chr7	protein_coding	NADH:ubiquinone oxidoreductase subunit A3
chr7	3620416	3620616	+	3620406	3620616	A5SS	0.5	50	50	ENSMUST00000076657.11	ENSMUSG00000035674.14	Ndufa3	chr7	protein_coding	NADH:ubiquinone oxidoreductase subunit A3
chr7	3620690	3622429	+	3621139	3622429	A5SS	0.5	50	50	ENSMUST00000150497.8	ENSMUSG00000035674.14	Ndufa3	chr7	protein_coding	NADH:ubiquinone oxidoreductase subunit A3
chr7	3624131	3631827	-	3624131;3627668	3627598;3631827	ES	0.5	50	50	ENSMUST00000155592.8	ENSMUSG00000006335.17	Tfpt	chr7	protein_coding	TCF3 (E2A) fusion partner
chr7	3623945	3624062	-	3623982	3624062	A3SS	0.5	50	50	ENSMUST00000155592.8	ENSMUSG00000006335.17	Tfpt	chr7	protein_coding	TCF3 (E2A) fusion partner
chr7	3632111	3632551	-	3632085	3632551	A3SS	0.5	50	50	ENSMUST00000155592.8	ENSMUSG00000006335.17	Tfpt	chr7	protein_coding	TCF3 (E2A) fusion partner
chr7	3623473	3623746	-	3623473	3623776	A5SS	0.5	50	50	ENSMUST00000155592.8	ENSMUSG00000006335.17	Tfpt	chr7	protein_coding	TCF3 (E2A) fusion partner
chr7	3624131	3632771	-	3624131	3627598	A5SS&ES	0.33	50	50	ENSMUST00000155592.8	ENSMUSG00000006335.17	Tfpt	chr7	protein_coding	TCF3 (E2A) fusion partner
chr7	3627668	3631823	-	3627668	3631827	A5SS	0.5	50	50	ENSMUST00000155592.8	ENSMUSG00000006335.17	Tfpt	chr7	protein_coding	TCF3 (E2A) fusion partner
chr7	3624131	3631827	-	3624131	3632771	A5SS	0.33	50	50	ENSMUST00000205596.2	ENSMUSG00000006335.17	Tfpt	chr7	protein_coding	TCF3 (E2A) fusion partner
chr7	3624131	3631827	-	3624131	3627598	A5SS&ES	0.33	50	50	ENSMUST00000206370.2	ENSMUSG00000006335.17	Tfpt	chr7	protein_coding	TCF3 (E2A) fusion partner
chr7	3624131	3631827	-	3627668	3631827	3pMXE	0.5	50	50	ENSMUST00000153143.2	ENSMUSG00000006335.17	Tfpt	chr7	protein_coding	TCF3 (E2A) fusion partner
chr7	3639750	3641630	+	3639750	3641648	A3SS	0.5	50	50	ENSMUST00000179769.8	ENSMUSG00000008373.17	Prpf31	chr7	protein_coding	pre-mRNA processing factor 31
chr7	3633186	3633557	+	3633055	3633557	A5SS	0.5	50	50	ENSMUST00000179769.8	ENSMUSG00000008373.17	Prpf31	chr7	protein_coding	pre-mRNA processing factor 31
chr7	3633746	3633844	+	3633741	3633844	A5SS	0.5	50	50	ENSMUST00000179769.8	ENSMUSG00000008373.17	Prpf31	chr7	protein_coding	pre-mRNA processing factor 31
chr7	3645599	3646173	-	3638494	3646173	A3SS	0.5	50	50	ENSMUST00000148641.2	ENSMUSG00000085039.3	Gm15927	chr7	lncRNA	predicted gene 15927
chr7	3647168	3647252	-	3646274	3647252	A3SS	0.5	50	50	ENSMUST00000148641.2	ENSMUSG00000085039.3	Gm15927	chr7	lncRNA	predicted gene 15927
chr7	3655127	3656144	+	3655127	3656199	A3SS	0.33	50	50	ENSMUST00000143085.8	ENSMUSG00000035632.17	Cnot3	chr7	protein_coding	CCR4-NOT transcription complex, subunit 3
chr7	3655127	3656196	+	3655127	3656199	A3SS	0.33	50	50	ENSMUST00000143085.8	ENSMUSG00000035632.17	Cnot3	chr7	protein_coding	CCR4-NOT transcription complex, subunit 3
chr7	3662505	3663676	+	3662505	3663727	A3SS	0.5	50	50	ENSMUST00000143085.8	ENSMUSG00000035632.17	Cnot3	chr7	protein_coding	CCR4-NOT transcription complex, subunit 3
chr7	3648594	3653800	+	3648583	3653800	A5SS	0.5	50	50	ENSMUST00000143085.8	ENSMUSG00000035632.17	Cnot3	chr7	protein_coding	CCR4-NOT transcription complex, subunit 3
chr7	3655127	3656144	+	3655127	3656196	A3SS	0.33	50	50	ENSMUST00000132344.8	ENSMUSG00000035632.17	Cnot3	chr7	protein_coding	CCR4-NOT transcription complex, subunit 3
chr7	3691681	3694805	-	3691681;3694387	3694261;3694805	ES	0.5	50	50	ENSMUST00000038608.14	ENSMUSG00000035596.15	Mboat7	chr7	protein_coding	membrane bound O-acyltransferase domain containing 7
chr7	3694934	3695740	-	3694934;3695117	3695039;3695740	ES	0.5	50	50	ENSMUST00000038608.14	ENSMUSG00000035596.15	Mboat7	chr7	protein_coding	membrane bound O-acyltransferase domain containing 7
chr7	3695117	3695532	-	3695117	3695740	A5SS	0.33	50	50	ENSMUST00000038608.14	ENSMUSG00000035596.15	Mboat7	chr7	protein_coding	membrane bound O-acyltransferase domain containing 7
chr7	3695117	3695746	-	3695117	3695740	A5SS	0.33	50	50	ENSMUST00000038608.14	ENSMUSG00000035596.15	Mboat7	chr7	protein_coding	membrane bound O-acyltransferase domain containing 7
chr7	3694934	3695740	-	3694934	3695039	5pMXE	0.5	50	50	ENSMUST00000127106.8	ENSMUSG00000035596.15	Mboat7	chr7	protein_coding	membrane bound O-acyltransferase domain containing 7
chr7	3689033	3691522	-	3681848	3691522	A3SS	0.5	50	50	ENSMUST00000128364.8	ENSMUSG00000035596.15	Mboat7	chr7	protein_coding	membrane bound O-acyltransferase domain containing 7
chr7	3681848	3686808	-	3681848	3691522	A5SS	0.5	50	50	ENSMUST00000128364.8	ENSMUSG00000035596.15	Mboat7	chr7	protein_coding	membrane bound O-acyltransferase domain containing 7
chr7	3695117	3695532	-	3695117	3695746	A5SS	0.33	50	50	ENSMUST00000131688.8	ENSMUSG00000035596.15	Mboat7	chr7	protein_coding	membrane bound O-acyltransferase domain containing 7
chr7	3694934	3695740	-	3695117	3695740	A3SS	0.5	50	50	ENSMUST00000150785.2	ENSMUSG00000035596.15	Mboat7	chr7	protein_coding	membrane bound O-acyltransferase domain containing 7
chr7	3696864	3697597	+	3695989	3697597	A5SS	0.2	50	50	ENSMUST00000205734.2	ENSMUSG00000035585.17	Tsen34	chr7	protein_coding	tRNA splicing endonuclease subunit 34
chr7	3696888	3697597	+	3695989	3697597	A5SS	0.2	50	50	ENSMUST00000205734.2	ENSMUSG00000035585.17	Tsen34	chr7	protein_coding	tRNA splicing endonuclease subunit 34
chr7	3697057	3697597	+	3695989	3697597	A5SS	0.2	50	50	ENSMUST00000205734.2	ENSMUSG00000035585.17	Tsen34	chr7	protein_coding	tRNA splicing endonuclease subunit 34
chr7	3697413	3697597	+	3695989	3697597	A5SS	0.2	50	50	ENSMUST00000205734.2	ENSMUSG00000035585.17	Tsen34	chr7	protein_coding	tRNA splicing endonuclease subunit 34
chr7	3698620;3698832	3698712;3703527	+	3698620	3703527	cassetteExon	0.5	100	100	ENSMUST00000108630.8	ENSMUSG00000035585.17	Tsen34	chr7	protein_coding	tRNA splicing endonuclease subunit 34
chr7	3698226	3698352	+	3698226	3698351	A3SS	0.25	50	50	ENSMUST00000108630.8	ENSMUSG00000035585.17	Tsen34	chr7	protein_coding	tRNA splicing endonuclease subunit 34
chr7	3698226	3698363	+	3698226	3698351	A3SS	0.25	50	50	ENSMUST00000108630.8	ENSMUSG00000035585.17	Tsen34	chr7	protein_coding	tRNA splicing endonuclease subunit 34
chr7	3698226	3698384	+	3698226	3698351	A3SS	0.25	50	50	ENSMUST00000108630.8	ENSMUSG00000035585.17	Tsen34	chr7	protein_coding	tRNA splicing endonuclease subunit 34
chr7	3698620	3703614	+	3698620	3703527	A3SS	0.33	50	50	ENSMUST00000108630.8	ENSMUSG00000035585.17	Tsen34	chr7	protein_coding	tRNA splicing endonuclease subunit 34
chr7	3696864	3697597	+	3696888	3697597	A5SS	0.2	50	50	ENSMUST00000108630.8	ENSMUSG00000035585.17	Tsen34	chr7	protein_coding	tRNA splicing endonuclease subunit 34
chr7	3697057	3697597	+	3696888	3697597	A5SS	0.2	50	50	ENSMUST00000108630.8	ENSMUSG00000035585.17	Tsen34	chr7	protein_coding	tRNA splicing endonuclease subunit 34
chr7	3697413	3697597	+	3696888	3697597	A5SS	0.2	50	50	ENSMUST00000108630.8	ENSMUSG00000035585.17	Tsen34	chr7	protein_coding	tRNA splicing endonuclease subunit 34
chr7	3697057	3697597	+	3696864	3697597	A5SS	0.2	50	50	ENSMUST00000123088.8	ENSMUSG00000035585.17	Tsen34	chr7	protein_coding	tRNA splicing endonuclease subunit 34
chr7	3697413	3697597	+	3696864	3697597	A5SS	0.2	50	50	ENSMUST00000123088.8	ENSMUSG00000035585.17	Tsen34	chr7	protein_coding	tRNA splicing endonuclease subunit 34
chr7	3698620	3703614	+	3698620	3698712	A3SS&ES	0.33	50	50	ENSMUST00000205287.2	ENSMUSG00000035585.17	Tsen34	chr7	protein_coding	tRNA splicing endonuclease subunit 34
chr7	3698226	3698352	+	3698226	3698363	A3SS	0.25	50	50	ENSMUST00000038521.14	ENSMUSG00000035585.17	Tsen34	chr7	protein_coding	tRNA splicing endonuclease subunit 34
chr7	3698226	3698384	+	3698226	3698363	A3SS	0.25	50	50	ENSMUST00000038521.14	ENSMUSG00000035585.17	Tsen34	chr7	protein_coding	tRNA splicing endonuclease subunit 34
chr7	3697413	3697597	+	3697057	3697597	A5SS	0.2	50	50	ENSMUST00000139396.3	ENSMUSG00000035585.17	Tsen34	chr7	protein_coding	tRNA splicing endonuclease subunit 34
chr7	3698226	3698384	+	3698226	3698352	A3SS	0.25	50	50	ENSMUST00000155060.8	ENSMUSG00000035585.17	Tsen34	chr7	protein_coding	tRNA splicing endonuclease subunit 34
chr7	3707767	3709650	+	3707767;3708918	3708732;3709650	ES	0.33	50	50	ENSMUST00000006496.15	ENSMUSG00000006333.15	Rps9	chr7	protein_coding	ribosomal protein S9
chr7	3708918;3709180	3709007;3709650	+	3708918	3709650	cassetteExon	0.5	100	100	ENSMUST00000006496.15	ENSMUSG00000006333.15	Rps9	chr7	protein_coding	ribosomal protein S9
chr7	3707063	3707214	+	3707063	3707326	A3SS	0.5	50	50	ENSMUST00000006496.15	ENSMUSG00000006333.15	Rps9	chr7	protein_coding	ribosomal protein S9
chr7	3707767	3709650	+	3707767	3708732	A3SS&ES	0.5	50	50	ENSMUST00000108623.8	ENSMUSG00000006333.15	Rps9	chr7	protein_coding	ribosomal protein S9
chr7	3708918	3709650	+	3708918	3709007	A3SS	0.5	50	50	ENSMUST00000108623.8	ENSMUSG00000006333.15	Rps9	chr7	protein_coding	ribosomal protein S9
chr7	3707767;3709180	3708732;3709650	+	3707767	3709650	cassetteExon	0.5	100	100	ENSMUST00000108624.8	ENSMUSG00000006333.15	Rps9	chr7	protein_coding	ribosomal protein S9
chr7	3722486	3723102	-	3722486;3722920	3722636;3723102	ES	0.5	50	50	ENSMUST00000078451.7	ENSMUSG00000058818.14	Pirb	chr7	protein_coding	paired Ig-like receptor B
chr7	3719216	3719593	-	3719335	3719593	A3SS	0.5	50	50	ENSMUST00000078451.7	ENSMUSG00000058818.14	Pirb	chr7	protein_coding	paired Ig-like receptor B
chr7	3820003	3824523	-	3820003;3824290	3824240;3824523	ES	0.5	50	50	ENSMUST00000153846.8	ENSMUSG00000074419.12	Gm15448	chr7	protein_coding	predicted gene 15448
chr7	3824825	3825613	-	3824825;3825385	3825083;3825613	ES	0.5	50	50	ENSMUST00000153846.8	ENSMUSG00000074419.12	Gm15448	chr7	protein_coding	predicted gene 15448
chr7	3824825	3825089	-	3824825	3825083	A5SS	0.33	50	50	ENSMUST00000153846.8	ENSMUSG00000074419.12	Gm15448	chr7	protein_coding	predicted gene 15448
chr7	3824825;3825385	3825089;3825613	-	3824825	3825613	cassetteExon	0.5	100	100	ENSMUST00000108620.8	ENSMUSG00000074419.12	Gm15448	chr7	protein_coding	predicted gene 15448
chr7	3820003	3824523	-	3824290	3824523	3pMXE	0.5	50	50	ENSMUST00000189095.7	ENSMUSG00000074419.12	Gm15448	chr7	protein_coding	predicted gene 15448
chr7	3841338	3843916	-	3841338;3843683	3843633;3843916	ES	0.5	50	50	ENSMUST00000108615.10	ENSMUSG00000089942.10	Pira2	chr7	protein_coding	paired-Ig-like receptor A2
chr7	3914711;3915251	3914955;3915479	-	3914711	3915479	cassetteExon	0.5	100	100	ENSMUST00000206077.2	ENSMUSG00000030427.18	Lilra6	chr7	protein_coding	leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6
chr7	3915787	3916026	-	3915787	3915912	A5SS	0.5	50	50	ENSMUST00000206077.2	ENSMUSG00000030427.18	Lilra6	chr7	protein_coding	leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6
chr7	4012833	4013465	-	4012833;4013299	4013250;4013465	ES	0.5	50	50	ENSMUST00000068865.13	ENSMUSG00000055541.19	Lair1	chr7	protein_coding	leukocyte-associated Ig-like receptor 1
chr7	4013631	4058917	-	4013631;4013845	4013729;4058917	ES	0.33	50	50	ENSMUST00000068865.13	ENSMUSG00000055541.19	Lair1	chr7	protein_coding	leukocyte-associated Ig-like receptor 1
chr7	4013631;4032035	4031706;4058917	-	4013631;4013845	4013729;4058917	MXE	0.5	100	100	ENSMUST00000068865.13	ENSMUSG00000055541.19	Lair1	chr7	protein_coding	leukocyte-associated Ig-like receptor 1
chr7	4013845;4032035	4031706;4058917	-	4013845	4058917	cassetteExon	0.5	100	100	ENSMUST00000068865.13	ENSMUSG00000055541.19	Lair1	chr7	protein_coding	leukocyte-associated Ig-like receptor 1
chr7	4012833	4013466	-	4012833	4013250	A5SS&ES	0.33	50	50	ENSMUST00000068865.13	ENSMUSG00000055541.19	Lair1	chr7	protein_coding	leukocyte-associated Ig-like receptor 1
chr7	4013845	4030004	-	4013845	4058917	A5SS	0.25	50	50	ENSMUST00000068865.13	ENSMUSG00000055541.19	Lair1	chr7	protein_coding	leukocyte-associated Ig-like receptor 1
chr7	4013845	4058796	-	4013845	4058917	A5SS	0.25	50	50	ENSMUST00000068865.13	ENSMUSG00000055541.19	Lair1	chr7	protein_coding	leukocyte-associated Ig-like receptor 1
chr7	4013631	4031706	-	4013631;4013845	4013729;4031706	ES	0.33	50	50	ENSMUST00000086400.13	ENSMUSG00000055541.19	Lair1	chr7	protein_coding	leukocyte-associated Ig-like receptor 1
chr7	4031406	4031706	-	4013845	4031706	A3SS	0.33	50	50	ENSMUST00000086400.13	ENSMUSG00000055541.19	Lair1	chr7	protein_coding	leukocyte-associated Ig-like receptor 1
chr7	4013845	4030004	-	4013845	4031706	A5SS	0.25	50	50	ENSMUST00000086400.13	ENSMUSG00000055541.19	Lair1	chr7	protein_coding	leukocyte-associated Ig-like receptor 1
chr7	4013845	4058796	-	4013845	4031706	A5SS&ES	0.25	50	50	ENSMUST00000086400.13	ENSMUSG00000055541.19	Lair1	chr7	protein_coding	leukocyte-associated Ig-like receptor 1
chr7	4032035	4058796	-	4032035	4058917	A5SS	0.5	50	50	ENSMUST00000086400.13	ENSMUSG00000055541.19	Lair1	chr7	protein_coding	leukocyte-associated Ig-like receptor 1
chr7	4013845	4058796	-	4013845;4032035	4031706;4058796	ES	0.5	50	50	ENSMUST00000136616.8	ENSMUSG00000055541.19	Lair1	chr7	protein_coding	leukocyte-associated Ig-like receptor 1
chr7	4012833	4013466	-	4012833	4013465	A5SS	0.33	50	50	ENSMUST00000136616.8	ENSMUSG00000055541.19	Lair1	chr7	protein_coding	leukocyte-associated Ig-like receptor 1
chr7	4013631	4058917	-	4013631	4013729	A5SS&ES	0.33	50	50	ENSMUST00000136616.8	ENSMUSG00000055541.19	Lair1	chr7	protein_coding	leukocyte-associated Ig-like receptor 1
chr7	4013845	4058917	-	4013845	4031706	A5SS&ES	0.25	50	50	ENSMUST00000136616.8	ENSMUSG00000055541.19	Lair1	chr7	protein_coding	leukocyte-associated Ig-like receptor 1
chr7	4013631;4032035	4031706;4058796	-	4013631;4013845	4013729;4058796	MXE	0.5	100	100	ENSMUST00000149395.8	ENSMUSG00000055541.19	Lair1	chr7	protein_coding	leukocyte-associated Ig-like receptor 1
chr7	4013845	4030004	-	4013845	4058796	A5SS	0.25	50	50	ENSMUST00000149395.8	ENSMUSG00000055541.19	Lair1	chr7	protein_coding	leukocyte-associated Ig-like receptor 1
chr7	4013631	4058917	-	4013631;4032035	4031706;4058917	ES	0.33	50	50	ENSMUST00000108600.9	ENSMUSG00000055541.19	Lair1	chr7	protein_coding	leukocyte-associated Ig-like receptor 1
chr7	4031406	4031706	-	4013631	4031706	A3SS	0.33	50	50	ENSMUST00000108600.9	ENSMUSG00000055541.19	Lair1	chr7	protein_coding	leukocyte-associated Ig-like receptor 1
chr7	4077261	4079214	-	4077261;4078494	4077832;4079214	ES	0.5	50	50	ENSMUST00000154825.8	ENSMUSG00000086155.8	9430041J12Rik	chr7	lncRNA	RIKEN cDNA 9430041J12 gene
chr7	4113291	4122910	-	4113291;4122807	4122679;4122910	ES	0.5	50	50	ENSMUST00000154825.8	ENSMUSG00000086155.8	9430041J12Rik	chr7	lncRNA	RIKEN cDNA 9430041J12 gene
chr7	4079343	4098457	-	4079283	4098457	A3SS	0.5	50	50	ENSMUST00000154825.8	ENSMUSG00000086155.8	9430041J12Rik	chr7	lncRNA	RIKEN cDNA 9430041J12 gene
chr7	4078494	4079214	-	4077261	4079214	A3SS	0.5	50	50	ENSMUST00000132560.8	ENSMUSG00000086155.8	9430041J12Rik	chr7	lncRNA	RIKEN cDNA 9430041J12 gene
chr7	4077261	4077832	-	4077261	4079214	A5SS	0.5	50	50	ENSMUST00000132560.8	ENSMUSG00000086155.8	9430041J12Rik	chr7	lncRNA	RIKEN cDNA 9430041J12 gene
chr7	4125654	4128522	+	4125654;4127730	4127619;4128522	ES	0.5	50	50	ENSMUST00000130150.8	ENSMUSG00000030428.17	Ttyh1	chr7	protein_coding	tweety family member 1
chr7	4123297	4125476	+	4122779	4125476	A5SS	0.5	50	50	ENSMUST00000130150.8	ENSMUSG00000030428.17	Ttyh1	chr7	protein_coding	tweety family member 1
chr7	4125611	4127619	+	4125654	4127619	A5SS	0.2	50	50	ENSMUST00000130150.8	ENSMUSG00000030428.17	Ttyh1	chr7	protein_coding	tweety family member 1
chr7	4125646	4127619	+	4125654	4127619	A5SS	0.2	50	50	ENSMUST00000130150.8	ENSMUSG00000030428.17	Ttyh1	chr7	protein_coding	tweety family member 1
chr7	4125650	4127619	+	4125654	4127619	A5SS	0.2	50	50	ENSMUST00000130150.8	ENSMUSG00000030428.17	Ttyh1	chr7	protein_coding	tweety family member 1
chr7	4127519	4127619	+	4125654	4127619	A5SS	0.2	50	50	ENSMUST00000130150.8	ENSMUSG00000030428.17	Ttyh1	chr7	protein_coding	tweety family member 1
chr7	4136737	4136865	+	4136737	4137350	A3SS	0.5	50	50	ENSMUST00000126971.8	ENSMUSG00000030428.17	Ttyh1	chr7	protein_coding	tweety family member 1
chr7	4134164	4134290	+	4133888	4134290	A5SS	0.5	50	50	ENSMUST00000126971.8	ENSMUSG00000030428.17	Ttyh1	chr7	protein_coding	tweety family member 1
chr7	4136216	4136662	+	4136216;4136401	4136356;4136662	ES	0.5	50	50	ENSMUST00000119661.8	ENSMUSG00000030428.17	Ttyh1	chr7	protein_coding	tweety family member 1
chr7	4125611	4127619	+	4125650	4127619	A5SS	0.2	50	50	ENSMUST00000148760.8	ENSMUSG00000030428.17	Ttyh1	chr7	protein_coding	tweety family member 1
chr7	4125646	4127619	+	4125650	4127619	A5SS	0.2	50	50	ENSMUST00000148760.8	ENSMUSG00000030428.17	Ttyh1	chr7	protein_coding	tweety family member 1
chr7	4125654	4128522	+	4127730	4128522	A5SS&ES	0.5	50	50	ENSMUST00000148760.8	ENSMUSG00000030428.17	Ttyh1	chr7	protein_coding	tweety family member 1
chr7	4127519	4127619	+	4125650	4127619	A5SS	0.2	50	50	ENSMUST00000148760.8	ENSMUSG00000030428.17	Ttyh1	chr7	protein_coding	tweety family member 1
chr7	4125611	4127619	+	4125646	4127619	A5SS	0.2	50	50	ENSMUST00000206987.2	ENSMUSG00000030428.17	Ttyh1	chr7	protein_coding	tweety family member 1
chr7	4127519	4127619	+	4125646	4127619	A5SS	0.2	50	50	ENSMUST00000206987.2	ENSMUSG00000030428.17	Ttyh1	chr7	protein_coding	tweety family member 1
chr7	4127519	4127619	+	4125611	4127619	A5SS	0.2	50	50	ENSMUST00000032594.13	ENSMUSG00000030428.17	Ttyh1	chr7	protein_coding	tweety family member 1
chr7	4143042	4145031	+	4143042;4144132	4144022;4145031	ES	0.5	50	50	ENSMUST00000128756.8	ENSMUSG00000035545.14	Leng8	chr7	protein_coding	leukocyte receptor cluster (LRC) member 8
chr7	4140150	4141695	+	4140121	4141695	A5SS	0.25	50	50	ENSMUST00000128756.8	ENSMUSG00000035545.14	Leng8	chr7	protein_coding	leukocyte receptor cluster (LRC) member 8
chr7	4140150	4142418	+	4141787	4142418	A5SS&ES	0.5	50	50	ENSMUST00000128756.8	ENSMUSG00000035545.14	Leng8	chr7	protein_coding	leukocyte receptor cluster (LRC) member 8
chr7	4140154	4141695	+	4140121	4141695	A5SS	0.25	50	50	ENSMUST00000128756.8	ENSMUSG00000035545.14	Leng8	chr7	protein_coding	leukocyte receptor cluster (LRC) member 8
chr7	4140618	4141695	+	4140121	4141695	A5SS	0.25	50	50	ENSMUST00000128756.8	ENSMUSG00000035545.14	Leng8	chr7	protein_coding	leukocyte receptor cluster (LRC) member 8
chr7	4140150;4141787	4141695;4142418	+	4140150	4142418	cassetteExon	0.5	100	100	ENSMUST00000132086.8	ENSMUSG00000035545.14	Leng8	chr7	protein_coding	leukocyte receptor cluster (LRC) member 8
chr7	4146036	4146258	+	4146036	4146418	A3SS	0.5	50	50	ENSMUST00000037472.13	ENSMUSG00000035545.14	Leng8	chr7	protein_coding	leukocyte receptor cluster (LRC) member 8
chr7	4140154	4141695	+	4140150	4141695	A5SS	0.25	50	50	ENSMUST00000037472.13	ENSMUSG00000035545.14	Leng8	chr7	protein_coding	leukocyte receptor cluster (LRC) member 8
chr7	4140618	4141695	+	4140150	4141695	A5SS	0.25	50	50	ENSMUST00000037472.13	ENSMUSG00000035545.14	Leng8	chr7	protein_coding	leukocyte receptor cluster (LRC) member 8
chr7	4140618	4141695	+	4140154	4141695	A5SS	0.25	50	50	ENSMUST00000121270.8	ENSMUSG00000035545.14	Leng8	chr7	protein_coding	leukocyte receptor cluster (LRC) member 8
chr7	4143042	4145031	+	4143042	4144022	3pMXE	0.5	50	50	ENSMUST00000154571.7	ENSMUSG00000035545.14	Leng8	chr7	protein_coding	leukocyte receptor cluster (LRC) member 8
chr7	4154786	4167084	-	4154786	4167092	A5SS	0.5	50	50	ENSMUST00000076831.7	ENSMUSG00000063838.7	Cdc42ep5	chr7	protein_coding	CDC42 effector protein (Rho GTPase binding) 5
chr7	4373203	4376209	-	4373203;4374652	4374602;4376209	ES	0.5	50	50	ENSMUST00000206928.2	ENSMUSG00000078810.5	Gp6	chr7	protein_coding	glycoprotein 6 (platelet)
chr7	4434633;4438097	4437993;4445593	-	4434633	4445593	cassetteExon	0.5	100	100	ENSMUST00000119485.8	ENSMUSG00000008435.16	Rdh13	chr7	protein_coding	retinol dehydrogenase 13 (all-trans and 9-cis)
chr7	4445748;4446770	4446736;4447202	-	4445748	4447202	cassetteExon	0.5	100	100	ENSMUST00000119485.8	ENSMUSG00000008435.16	Rdh13	chr7	protein_coding	retinol dehydrogenase 13 (all-trans and 9-cis)
chr7	4447320;4448121	4447977;4448446	-	4447320	4448446	cassetteExon	0.5	100	100	ENSMUST00000119485.8	ENSMUSG00000008435.16	Rdh13	chr7	protein_coding	retinol dehydrogenase 13 (all-trans and 9-cis)
chr7	4447320	4448413	-	4447320	4448446	A5SS	0.33	50	50	ENSMUST00000119485.8	ENSMUSG00000008435.16	Rdh13	chr7	protein_coding	retinol dehydrogenase 13 (all-trans and 9-cis)
chr7	4434633	4445593	-	4438097	4445593	3pMXE	0.5	50	50	ENSMUST00000138798.2	ENSMUSG00000008435.16	Rdh13	chr7	protein_coding	retinol dehydrogenase 13 (all-trans and 9-cis)
chr7	4447320	4448413	-	4447320	4447977	5pMXE	0.33	50	50	ENSMUST00000138798.2	ENSMUSG00000008435.16	Rdh13	chr7	protein_coding	retinol dehydrogenase 13 (all-trans and 9-cis)
chr7	4447320	4448446	-	4447320	4447977	5pMXE	0.33	50	50	ENSMUST00000138798.2	ENSMUSG00000008435.16	Rdh13	chr7	protein_coding	retinol dehydrogenase 13 (all-trans and 9-cis)
chr7	4464023	4468358	+	4464023;4465399	4465285;4468358	ES	0.16	50	50	ENSMUST00000163804.8	ENSMUSG00000006154.14	Eps8l1	chr7	protein_coding	EPS8-like 1
chr7	4467655	4468358	+	4465399	4468358	A5SS	0.16	50	50	ENSMUST00000163804.8	ENSMUSG00000006154.14	Eps8l1	chr7	protein_coding	EPS8-like 1
chr7	4467759	4468358	+	4465399	4468358	A5SS	0.16	50	50	ENSMUST00000163804.8	ENSMUSG00000006154.14	Eps8l1	chr7	protein_coding	EPS8-like 1
chr7	4467870	4468358	+	4465399	4468358	A5SS	0.16	50	50	ENSMUST00000163804.8	ENSMUSG00000006154.14	Eps8l1	chr7	protein_coding	EPS8-like 1
chr7	4467967	4468358	+	4465399	4468358	A5SS	0.16	50	50	ENSMUST00000163804.8	ENSMUSG00000006154.14	Eps8l1	chr7	protein_coding	EPS8-like 1
chr7	4464023	4465285	+	4464023	4472195	A3SS	0.33	50	50	ENSMUST00000167298.2	ENSMUSG00000006154.14	Eps8l1	chr7	protein_coding	EPS8-like 1
chr7	4464023	4468358	+	4464023	4472195	A3SS	0.33	50	50	ENSMUST00000167298.2	ENSMUSG00000006154.14	Eps8l1	chr7	protein_coding	EPS8-like 1
chr7	4471893	4472195	+	4464023	4472195	A5SS	0.5	50	50	ENSMUST00000167298.2	ENSMUSG00000006154.14	Eps8l1	chr7	protein_coding	EPS8-like 1
chr7	4480997	4481618	+	4480997;4481313	4481139;4481618	ES	0.5	50	50	ENSMUST00000171445.8	ENSMUSG00000006154.14	Eps8l1	chr7	protein_coding	EPS8-like 1
chr7	4473041	4473182	+	4473041	4473282	A3SS	0.5	50	50	ENSMUST00000171445.8	ENSMUSG00000006154.14	Eps8l1	chr7	protein_coding	EPS8-like 1
chr7	4477212	4477343	+	4477212	4480329	A3SS	0.5	50	50	ENSMUST00000171445.8	ENSMUSG00000006154.14	Eps8l1	chr7	protein_coding	EPS8-like 1
chr7	4467655	4468358	+	4464023	4468358	A5SS	0.16	50	50	ENSMUST00000171445.8	ENSMUSG00000006154.14	Eps8l1	chr7	protein_coding	EPS8-like 1
chr7	4467759	4468358	+	4464023	4468358	A5SS	0.16	50	50	ENSMUST00000171445.8	ENSMUSG00000006154.14	Eps8l1	chr7	protein_coding	EPS8-like 1
chr7	4467870	4468358	+	4464023	4468358	A5SS	0.16	50	50	ENSMUST00000171445.8	ENSMUSG00000006154.14	Eps8l1	chr7	protein_coding	EPS8-like 1
chr7	4467967	4468358	+	4464023	4468358	A5SS	0.16	50	50	ENSMUST00000171445.8	ENSMUSG00000006154.14	Eps8l1	chr7	protein_coding	EPS8-like 1
chr7	4480698	4480889	+	4480694	4480889	A5SS	0.5	50	50	ENSMUST00000171445.8	ENSMUSG00000006154.14	Eps8l1	chr7	protein_coding	EPS8-like 1
chr7	4467759	4468358	+	4467655	4468358	A5SS	0.16	50	50	ENSMUST00000167810.8	ENSMUSG00000006154.14	Eps8l1	chr7	protein_coding	EPS8-like 1
chr7	4467870	4468358	+	4467655	4468358	A5SS	0.16	50	50	ENSMUST00000167810.8	ENSMUSG00000006154.14	Eps8l1	chr7	protein_coding	EPS8-like 1
chr7	4467967	4468358	+	4467655	4468358	A5SS	0.16	50	50	ENSMUST00000167810.8	ENSMUSG00000006154.14	Eps8l1	chr7	protein_coding	EPS8-like 1
chr7	4467870	4468358	+	4467759	4468358	A5SS	0.16	50	50	ENSMUST00000170423.8	ENSMUSG00000006154.14	Eps8l1	chr7	protein_coding	EPS8-like 1
chr7	4467967	4468358	+	4467759	4468358	A5SS	0.16	50	50	ENSMUST00000170423.8	ENSMUSG00000006154.14	Eps8l1	chr7	protein_coding	EPS8-like 1
chr7	4467967	4468358	+	4467870	4468358	A5SS	0.16	50	50	ENSMUST00000169820.8	ENSMUSG00000006154.14	Eps8l1	chr7	protein_coding	EPS8-like 1
chr7	4500334	4504265	-	4500334;4500545	4500415;4504265	ES	0.5	50	50	ENSMUST00000124248.8	ENSMUSG00000019254.17	Ppp1r12c	chr7	protein_coding	protein phosphatase 1, regulatory subunit 12C
chr7	4484579	4486102	-	4486012	4486102	A3SS&ES	0.5	50	50	ENSMUST00000124248.8	ENSMUSG00000019254.17	Ppp1r12c	chr7	protein_coding	protein phosphatase 1, regulatory subunit 12C
chr7	4485448	4485583	-	4485428	4485583	A3SS	0.5	50	50	ENSMUST00000124248.8	ENSMUSG00000019254.17	Ppp1r12c	chr7	protein_coding	protein phosphatase 1, regulatory subunit 12C
chr7	4486184	4486340	-	4486187	4486340	A3SS	0.5	50	50	ENSMUST00000124248.8	ENSMUSG00000019254.17	Ppp1r12c	chr7	protein_coding	protein phosphatase 1, regulatory subunit 12C
chr7	4515282	4516810	-	4515282;4516612	4516580;4516810	ES	0.25	50	50	ENSMUST00000071798.13	ENSMUSG00000064179.14	Tnnt1	chr7	protein_coding	troponin T1, skeletal, slow
chr7	4511624	4512010	-	4511582	4512010	A3SS	0.5	50	50	ENSMUST00000071798.13	ENSMUSG00000064179.14	Tnnt1	chr7	protein_coding	troponin T1, skeletal, slow
chr7	4513445	4516580	-	4515282	4516580	A3SS&ES	0.33	50	50	ENSMUST00000071798.13	ENSMUSG00000064179.14	Tnnt1	chr7	protein_coding	troponin T1, skeletal, slow
chr7	4515279	4516810	-	4516612	4516810	A3SS&ES	0.25	50	50	ENSMUST00000071798.13	ENSMUSG00000064179.14	Tnnt1	chr7	protein_coding	troponin T1, skeletal, slow
chr7	4515285	4516580	-	4515282	4516580	A3SS	0.33	50	50	ENSMUST00000071798.13	ENSMUSG00000064179.14	Tnnt1	chr7	protein_coding	troponin T1, skeletal, slow
chr7	4515285	4516810	-	4516612	4516810	A3SS&ES	0.25	50	50	ENSMUST00000071798.13	ENSMUSG00000064179.14	Tnnt1	chr7	protein_coding	troponin T1, skeletal, slow
chr7	4510611	4510687	-	4510611	4511473	A5SS	0.5	50	50	ENSMUST00000071798.13	ENSMUSG00000064179.14	Tnnt1	chr7	protein_coding	troponin T1, skeletal, slow
chr7	4517378	4517955	-	4517378	4518930	A5SS	0.5	50	50	ENSMUST00000071798.13	ENSMUSG00000064179.14	Tnnt1	chr7	protein_coding	troponin T1, skeletal, slow
chr7	4515285	4516810	-	4515285;4516612	4516580;4516810	ES	0.25	50	50	ENSMUST00000108587.9	ENSMUSG00000064179.14	Tnnt1	chr7	protein_coding	troponin T1, skeletal, slow
chr7	4513445	4516580	-	4515285	4516580	A3SS&ES	0.33	50	50	ENSMUST00000108587.9	ENSMUSG00000064179.14	Tnnt1	chr7	protein_coding	troponin T1, skeletal, slow
chr7	4515282	4516810	-	4516612	4516810	A3SS&ES	0.25	50	50	ENSMUST00000108587.9	ENSMUSG00000064179.14	Tnnt1	chr7	protein_coding	troponin T1, skeletal, slow
chr7	4515279	4516810	-	4515282	4516810	A3SS	0.25	50	50	ENSMUST00000163710.8	ENSMUSG00000064179.14	Tnnt1	chr7	protein_coding	troponin T1, skeletal, slow
chr7	4515285	4516810	-	4515282	4516810	A3SS	0.25	50	50	ENSMUST00000163710.8	ENSMUSG00000064179.14	Tnnt1	chr7	protein_coding	troponin T1, skeletal, slow
chr7	4517225	4519327	-	4517225	4517336	5pMXE	0.5	50	50	ENSMUST00000166161.8	ENSMUSG00000064179.14	Tnnt1	chr7	protein_coding	troponin T1, skeletal, slow
chr7	4515285	4516810	-	4515279	4516810	A3SS	0.25	50	50	ENSMUST00000166161.8	ENSMUSG00000064179.14	Tnnt1	chr7	protein_coding	troponin T1, skeletal, slow
chr7	4524385	4524967	-	4524385	4524815	A5SS&ES	0.5	50	50	ENSMUST00000098859.10	ENSMUSG00000035458.16	Tnni3	chr7	protein_coding	troponin I, cardiac 3
chr7	4525081	4525169	-	4525081	4525304	A5SS	0.5	50	50	ENSMUST00000098859.10	ENSMUSG00000035458.16	Tnni3	chr7	protein_coding	troponin I, cardiac 3
chr7	4525440	4527143	-	4525440	4525694	5pMXE	0.5	50	50	ENSMUST00000140424.8	ENSMUSG00000035458.16	Tnni3	chr7	protein_coding	troponin I, cardiac 3
chr7	4527011	4527143	-	4525440	4527143	A3SS	0.5	50	50	ENSMUST00000154913.2	ENSMUSG00000035458.16	Tnni3	chr7	protein_coding	troponin I, cardiac 3
chr7	4530005	4533297	+	4530005	4530894	3pMXE	0.5	50	50	ENSMUST00000123390.2	ENSMUSG00000085725.3	Gm15873	chr7	lncRNA	predicted gene 15873
chr7	4549334	4549572	-	4549334	4550312	A5SS	0.5	50	50	ENSMUST00000206023.2	ENSMUSG00000004961.8	Syt5	chr7	protein_coding	synaptotagmin V
chr7	4599670	4600913	-	4584127	4600913	A3SS	0.5	50	50	ENSMUST00000206999.2	ENSMUSG00000035429.14	Ptprh	chr7	protein_coding	protein tyrosine phosphatase, receptor type, H
chr7	4632801	4634122	-	4632801	4633221	5pMXE	0.33	50	50	ENSMUST00000055085.8	ENSMUSG00000045282.8	Tmem86b	chr7	protein_coding	transmembrane protein 86B
chr7	4632801	4633211	-	4632801	4633221	A5SS	0.33	50	50	ENSMUST00000055085.8	ENSMUSG00000045282.8	Tmem86b	chr7	protein_coding	transmembrane protein 86B
chr7	4632801	4633211	-	4632801	4634122	A5SS	0.33	50	50	ENSMUST00000205402.2	ENSMUSG00000045282.8	Tmem86b	chr7	protein_coding	transmembrane protein 86B
chr7	4645036	4645135	-	4645040	4645135	A3SS	0.5	50	50	ENSMUST00000064099.8	ENSMUSG00000052296.8	Ppp6r1	chr7	protein_coding	protein phosphatase 6, regulatory subunit 1
chr7	4649939	4650377	-	4649939	4661480	A5SS	0.33	50	50	ENSMUST00000064099.8	ENSMUSG00000052296.8	Ppp6r1	chr7	protein_coding	protein phosphatase 6, regulatory subunit 1
chr7	4649939	4661678	-	4649939	4661480	A5SS	0.33	50	50	ENSMUST00000064099.8	ENSMUSG00000052296.8	Ppp6r1	chr7	protein_coding	protein phosphatase 6, regulatory subunit 1
chr7	4649939	4661678	-	4649939	4650377	5pMXE	0.33	50	50	ENSMUST00000206532.2	ENSMUSG00000052296.8	Ppp6r1	chr7	protein_coding	protein phosphatase 6, regulatory subunit 1
chr7	4665241	4666380	-	4663844	4666380	A3SS	0.5	50	50	ENSMUST00000079970.6	ENSMUSG00000063802.6	Hspbp1	chr7	protein_coding	HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
chr7	4667271	4667519	-	4666491	4667519	A3SS	0.5	50	50	ENSMUST00000079970.6	ENSMUSG00000063802.6	Hspbp1	chr7	protein_coding	HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
chr7	4687481	4687893	-	4687568	4687893	A3SS	0.33	50	50	ENSMUST00000079970.6	ENSMUSG00000063802.6	Hspbp1	chr7	protein_coding	HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
chr7	4687565	4687893	-	4687568	4687893	A3SS	0.33	50	50	ENSMUST00000079970.6	ENSMUSG00000063802.6	Hspbp1	chr7	protein_coding	HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
chr7	4687565	4687893	-	4687481	4687893	A3SS	0.33	50	50	ENSMUST00000205952.2	ENSMUSG00000063802.6	Hspbp1	chr7	protein_coding	HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
chr7	4695559	4695653	+	4694214	4695653	A5SS	0.5	50	50	ENSMUST00000120836.8	ENSMUSG00000035390.17	Brsk1	chr7	protein_coding	BR serine/threonine kinase 1
chr7	4723851	4726783	-	4712054	4726783	A3SS	0.5	50	50	ENSMUST00000086364.11	ENSMUSG00000046456.15	Tmem150b	chr7	protein_coding	transmembrane protein 150B
chr7	4744980	4745618	+	4744980;4745286	4745121;4745618	ES	0.5	50	50	ENSMUST00000098853.9	ENSMUSG00000059851.16	Kmt5c	chr7	protein_coding	lysine methyltransferase 5C
chr7	4745727	4745950	+	4745727	4745946	A3SS	0.5	50	50	ENSMUST00000098853.9	ENSMUSG00000059851.16	Kmt5c	chr7	protein_coding	lysine methyltransferase 5C
chr7	4749260	4749341	+	4749260	4749376	A3SS	0.5	50	50	ENSMUST00000098853.9	ENSMUSG00000059851.16	Kmt5c	chr7	protein_coding	lysine methyltransferase 5C
chr7	4743238	4744779	+	4743180	4744779	A5SS	0.33	50	50	ENSMUST00000098853.9	ENSMUSG00000059851.16	Kmt5c	chr7	protein_coding	lysine methyltransferase 5C
chr7	4743817	4744779	+	4743180	4744779	A5SS	0.33	50	50	ENSMUST00000098853.9	ENSMUSG00000059851.16	Kmt5c	chr7	protein_coding	lysine methyltransferase 5C
chr7	4743238;4743817	4743720;4744779	+	4743238	4744779	cassetteExon	0.5	100	100	ENSMUST00000135541.2	ENSMUSG00000059851.16	Kmt5c	chr7	protein_coding	lysine methyltransferase 5C
chr7	4743238	4744779	+	4743817	4744779	A5SS	0.33	50	50	ENSMUST00000108582.10	ENSMUSG00000059851.16	Kmt5c	chr7	protein_coding	lysine methyltransferase 5C
chr7	4744980	4745618	+	4744980	4745121	3pMXE	0.5	50	50	ENSMUST00000129927.2	ENSMUSG00000059851.16	Kmt5c	chr7	protein_coding	lysine methyltransferase 5C
chr7	4755171	4755723	-	4755160	4755723	A3SS	0.5	50	50	ENSMUST00000183971.8	ENSMUSG00000051811.15	Cox6b2	chr7	protein_coding	cytochrome c oxidase subunit 6B2
chr7	4755879	4755952	-	4755848	4755952	A3SS	0.5	50	50	ENSMUST00000183971.8	ENSMUSG00000051811.15	Cox6b2	chr7	protein_coding	cytochrome c oxidase subunit 6B2
chr7	4754974	4755060	-	4754974	4755090	A5SS	0.25	50	50	ENSMUST00000183971.8	ENSMUSG00000051811.15	Cox6b2	chr7	protein_coding	cytochrome c oxidase subunit 6B2
chr7	4754974	4755103	-	4754974	4755090	A5SS	0.25	50	50	ENSMUST00000183971.8	ENSMUSG00000051811.15	Cox6b2	chr7	protein_coding	cytochrome c oxidase subunit 6B2
chr7	4754974	4755107	-	4754974	4755090	A5SS	0.25	50	50	ENSMUST00000183971.8	ENSMUSG00000051811.15	Cox6b2	chr7	protein_coding	cytochrome c oxidase subunit 6B2
chr7	4754974	4755103	-	4754974	4755060	A5SS	0.25	50	50	ENSMUST00000182111.8	ENSMUSG00000051811.15	Cox6b2	chr7	protein_coding	cytochrome c oxidase subunit 6B2
chr7	4754974	4755107	-	4754974	4755060	A5SS	0.25	50	50	ENSMUST00000182111.8	ENSMUSG00000051811.15	Cox6b2	chr7	protein_coding	cytochrome c oxidase subunit 6B2
chr7	4754974	4755103	-	4754974	4755107	A5SS	0.25	50	50	ENSMUST00000184143.8	ENSMUSG00000051811.15	Cox6b2	chr7	protein_coding	cytochrome c oxidase subunit 6B2
chr7	4773495	4773574	-	4773520	4773574	A3SS	0.5	50	50	ENSMUST00000163574.8	ENSMUSG00000092518.10	Fam71e2	chr7	protein_coding	family with sequence similarity 71, member E2
chr7	4779496	4784591	-	4779496	4780979	5pMXE	0.33	50	50	ENSMUST00000094892.12	ENSMUSG00000004371.16	Il11	chr7	protein_coding	interleukin 11
chr7	4779496	4785794	-	4779496	4780979	5pMXE	0.33	50	50	ENSMUST00000094892.12	ENSMUSG00000004371.16	Il11	chr7	protein_coding	interleukin 11
chr7	4779496;4784657	4784591;4785794	-	4779496	4785794	cassetteExon	0.5	100	100	ENSMUST00000163481.3	ENSMUSG00000004371.16	Il11	chr7	protein_coding	interleukin 11
chr7	4788278;4788537	4788474;4792004	-	4788278	4792004	cassetteExon	0.5	100	100	ENSMUST00000168578.3	ENSMUSG00000030431.9	Tmem238	chr7	protein_coding	transmembrane protein 238
chr7	4796625	4797049	+	4796625	4797063	A3SS	0.5	50	50	ENSMUST00000032597.12	ENSMUSG00000030432.13	Rpl28	chr7	protein_coding	ribosomal protein L28
chr7	4814555	4814886	-	4814555	4815162	A5SS	0.33	50	50	ENSMUST00000205815.2	ENSMUSG00000060860.9	Ube2s	chr7	protein_coding	ubiquitin-conjugating enzyme E2S
chr7	4814555	4815008	-	4814555	4815162	A5SS	0.33	50	50	ENSMUST00000205815.2	ENSMUSG00000060860.9	Ube2s	chr7	protein_coding	ubiquitin-conjugating enzyme E2S
chr7	4814555	4814886	-	4814555	4815008	A5SS	0.33	50	50	ENSMUST00000205885.2	ENSMUSG00000060860.9	Ube2s	chr7	protein_coding	ubiquitin-conjugating enzyme E2S
chr7	4833907	4837229	-	4833907;4834722	4834672;4837229	ES	0.5	50	50	ENSMUST00000117452.8	ENSMUSG00000053550.14	Shisa7	chr7	protein_coding	shisa family member 7
chr7	4833907	4837229	-	4834722	4837229	3pMXE	0.5	50	50	ENSMUST00000132806.2	ENSMUSG00000053550.14	Shisa7	chr7	protein_coding	shisa family member 7
chr7	4854532	4873182	-	4854532	4869060	5pMXE	0.5	50	50	ENSMUST00000064547.13	ENSMUSG00000052605.13	Isoc2b	chr7	protein_coding	isochorismatase domain containing 2b
chr7	4925638	4926210	+	4925638	4926207	A3SS	0.5	50	50	ENSMUST00000207506.2	ENSMUSG00000035285.7	Nat14	chr7	protein_coding	N-acetyltransferase 14
chr7	4925838	4926207	+	4925638	4926207	A5SS	0.33	50	50	ENSMUST00000207506.2	ENSMUSG00000035285.7	Nat14	chr7	protein_coding	N-acetyltransferase 14
chr7	4926061	4926207	+	4925638	4926207	A5SS	0.33	50	50	ENSMUST00000207506.2	ENSMUSG00000035285.7	Nat14	chr7	protein_coding	N-acetyltransferase 14
chr7	4926061	4926207	+	4925838	4926207	A5SS	0.33	50	50	ENSMUST00000207527.2	ENSMUSG00000035285.7	Nat14	chr7	protein_coding	N-acetyltransferase 14
chr7	4960712	4961829	-	4944215	4961829	A3SS	0.5	50	50	ENSMUST00000208109.2	ENSMUSG00000030433.16	Sbk2	chr7	protein_coding	SH3-binding domain kinase family, member 2
chr7	4964213	4965930	-	4962031	4965930	A3SS	0.5	50	50	ENSMUST00000208109.2	ENSMUSG00000030433.16	Sbk2	chr7	protein_coding	SH3-binding domain kinase family, member 2
chr7	4966184	4967300	-	4966184	4967147	A5SS	0.5	50	50	ENSMUST00000208109.2	ENSMUSG00000030433.16	Sbk2	chr7	protein_coding	SH3-binding domain kinase family, member 2
chr7	4973634	4974123	-	4973634	4973930	5pMXE	0.5	50	50	ENSMUST00000144863.8	ENSMUSG00000085272.8	Sbk3	chr7	protein_coding	SH3 domain binding kinase family, member 3
chr7	4996551	4999003	-	4989485	4999003	A3SS	0.25	50	50	ENSMUST00000159754.2	ENSMUSG00000051550.11	Zfp579	chr7	protein_coding	zinc finger protein 579
chr7	4997911	4999003	-	4989485	4999003	A3SS	0.25	50	50	ENSMUST00000159754.2	ENSMUSG00000051550.11	Zfp579	chr7	protein_coding	zinc finger protein 579
chr7	4998349	4999003	-	4989485	4999003	A3SS	0.25	50	50	ENSMUST00000159754.2	ENSMUSG00000051550.11	Zfp579	chr7	protein_coding	zinc finger protein 579
chr7	4997911	4999003	-	4996551	4999003	A3SS	0.25	50	50	ENSMUST00000160225.2	ENSMUSG00000051550.11	Zfp579	chr7	protein_coding	zinc finger protein 579
chr7	4998349	4999003	-	4996551	4999003	A3SS	0.25	50	50	ENSMUST00000160225.2	ENSMUSG00000051550.11	Zfp579	chr7	protein_coding	zinc finger protein 579
chr7	4998349	4999003	-	4997911	4999003	A3SS	0.25	50	50	ENSMUST00000108572.2	ENSMUSG00000051550.11	Zfp579	chr7	protein_coding	zinc finger protein 579
chr7	5016021	5017453	-	5016021	5017108	5pMXE	0.14	50	50	ENSMUST00000167804.9	ENSMUSG00000061374.15	Fiz1	chr7	protein_coding	Flt3 interacting zinc finger protein 1
chr7	5016021	5017536	-	5016021	5017108	5pMXE	0.14	50	50	ENSMUST00000167804.9	ENSMUSG00000061374.15	Fiz1	chr7	protein_coding	Flt3 interacting zinc finger protein 1
chr7	5016021	5017624	-	5016021	5017108	5pMXE	0.14	50	50	ENSMUST00000167804.9	ENSMUSG00000061374.15	Fiz1	chr7	protein_coding	Flt3 interacting zinc finger protein 1
chr7	5016021	5016208	-	5016021	5017108	A5SS	0.14	50	50	ENSMUST00000167804.9	ENSMUSG00000061374.15	Fiz1	chr7	protein_coding	Flt3 interacting zinc finger protein 1
chr7	5016021	5016448	-	5016021	5017108	A5SS	0.14	50	50	ENSMUST00000167804.9	ENSMUSG00000061374.15	Fiz1	chr7	protein_coding	Flt3 interacting zinc finger protein 1
chr7	5016021	5017083	-	5016021	5017108	A5SS	0.14	50	50	ENSMUST00000167804.9	ENSMUSG00000061374.15	Fiz1	chr7	protein_coding	Flt3 interacting zinc finger protein 1
chr7	5016021	5016208	-	5016021	5017624	A5SS	0.14	50	50	ENSMUST00000077385.15	ENSMUSG00000061374.15	Fiz1	chr7	protein_coding	Flt3 interacting zinc finger protein 1
chr7	5016021	5016448	-	5016021	5017624	A5SS	0.14	50	50	ENSMUST00000077385.15	ENSMUSG00000061374.15	Fiz1	chr7	protein_coding	Flt3 interacting zinc finger protein 1
chr7	5016021	5017083	-	5016021	5017624	A5SS	0.14	50	50	ENSMUST00000077385.15	ENSMUSG00000061374.15	Fiz1	chr7	protein_coding	Flt3 interacting zinc finger protein 1
chr7	5016021	5017453	-	5016021	5017624	A5SS	0.14	50	50	ENSMUST00000077385.15	ENSMUSG00000061374.15	Fiz1	chr7	protein_coding	Flt3 interacting zinc finger protein 1
chr7	5016021	5017536	-	5016021	5017624	A5SS	0.14	50	50	ENSMUST00000077385.15	ENSMUSG00000061374.15	Fiz1	chr7	protein_coding	Flt3 interacting zinc finger protein 1
chr7	5016021	5016208	-	5016021	5017536	A5SS	0.14	50	50	ENSMUST00000165320.3	ENSMUSG00000061374.15	Fiz1	chr7	protein_coding	Flt3 interacting zinc finger protein 1
chr7	5016021	5016448	-	5016021	5017536	A5SS	0.14	50	50	ENSMUST00000165320.3	ENSMUSG00000061374.15	Fiz1	chr7	protein_coding	Flt3 interacting zinc finger protein 1
chr7	5016021	5017083	-	5016021	5017536	A5SS	0.14	50	50	ENSMUST00000165320.3	ENSMUSG00000061374.15	Fiz1	chr7	protein_coding	Flt3 interacting zinc finger protein 1
chr7	5016021	5017453	-	5016021	5017536	A5SS	0.14	50	50	ENSMUST00000165320.3	ENSMUSG00000061374.15	Fiz1	chr7	protein_coding	Flt3 interacting zinc finger protein 1
chr7	5016021	5016448	-	5016021	5016208	5pMXE	0.14	50	50	ENSMUST00000208944.2	ENSMUSG00000061374.15	Fiz1	chr7	protein_coding	Flt3 interacting zinc finger protein 1
chr7	5016021	5017083	-	5016021	5016208	5pMXE	0.14	50	50	ENSMUST00000208944.2	ENSMUSG00000061374.15	Fiz1	chr7	protein_coding	Flt3 interacting zinc finger protein 1
chr7	5016021	5017453	-	5016021	5016208	5pMXE	0.14	50	50	ENSMUST00000208944.2	ENSMUSG00000061374.15	Fiz1	chr7	protein_coding	Flt3 interacting zinc finger protein 1
chr7	5016021	5017453	-	5016021	5017083	5pMXE	0.14	50	50	ENSMUST00000207030.2	ENSMUSG00000061374.15	Fiz1	chr7	protein_coding	Flt3 interacting zinc finger protein 1
chr7	5016021	5016448	-	5016021	5017083	A5SS	0.14	50	50	ENSMUST00000207030.2	ENSMUSG00000061374.15	Fiz1	chr7	protein_coding	Flt3 interacting zinc finger protein 1
chr7	5016021	5017453	-	5016021	5016448	5pMXE	0.14	50	50	ENSMUST00000207946.2	ENSMUSG00000061374.15	Fiz1	chr7	protein_coding	Flt3 interacting zinc finger protein 1
chr7	5018559	5020436	+	5020043	5020436	A5SS&ES	0.33	50	50	ENSMUST00000207901.2	ENSMUSG00000051184.8	Zfp524	chr7	protein_coding	zinc finger protein 524
chr7	5018887	5020436	+	5020043	5020436	A5SS&ES	0.33	50	50	ENSMUST00000207901.2	ENSMUSG00000051184.8	Zfp524	chr7	protein_coding	zinc finger protein 524
chr7	5018887	5020436	+	5018559	5020436	A5SS	0.33	50	50	ENSMUST00000086349.5	ENSMUSG00000051184.8	Zfp524	chr7	protein_coding	zinc finger protein 524
chr7	5023654	5035762	+	5021038	5035762	A5SS	0.25	50	50	ENSMUST00000207050.2	ENSMUSG00000109129.2	Gm44973	chr7	protein_coding	predicted gene 44973
chr7	5034278	5035762	+	5021038	5035762	A5SS	0.25	50	50	ENSMUST00000207050.2	ENSMUSG00000109129.2	Gm44973	chr7	protein_coding	predicted gene 44973
chr7	5035206	5035762	+	5021038	5035762	A5SS	0.25	50	50	ENSMUST00000207050.2	ENSMUSG00000109129.2	Gm44973	chr7	protein_coding	predicted gene 44973
chr7	5023654	5035762	+	5023654;5035206	5031990;5035762	ES	0.33	50	50	ENSMUST00000076251.7	ENSMUSG00000074405.9	Zfp865	chr7	protein_coding	zinc finger protein 865
chr7	5023654	5024521	+	5023654	5031990	A3SS	0.33	50	50	ENSMUST00000076251.7	ENSMUSG00000074405.9	Zfp865	chr7	protein_coding	zinc finger protein 865
chr7	5034278	5035762	+	5035206	5035762	A5SS	0.33	50	50	ENSMUST00000076251.7	ENSMUSG00000074405.9	Zfp865	chr7	protein_coding	zinc finger protein 865
chr7	5023654	5035762	+	5023654;5034278	5031990;5035762	ES	0.33	50	50	ENSMUST00000085427.6	ENSMUSG00000074405.9	Zfp865	chr7	protein_coding	zinc finger protein 865
chr7	5023654	5062495	+	5023654	5035762	3pMXE	0.25	50	50	ENSMUST00000207362.2	ENSMUSG00000074405.9	Zfp865	chr7	protein_coding	zinc finger protein 865
chr7	5023654	5024521	+	5023654	5035762	A3SS	0.25	50	50	ENSMUST00000207362.2	ENSMUSG00000074405.9	Zfp865	chr7	protein_coding	zinc finger protein 865
chr7	5023654	5031990	+	5023654	5035762	A3SS	0.25	50	50	ENSMUST00000207362.2	ENSMUSG00000074405.9	Zfp865	chr7	protein_coding	zinc finger protein 865
chr7	5034278	5035762	+	5023654	5035762	A5SS	0.25	50	50	ENSMUST00000207362.2	ENSMUSG00000074405.9	Zfp865	chr7	protein_coding	zinc finger protein 865
chr7	5035206	5035762	+	5023654	5035762	A5SS	0.25	50	50	ENSMUST00000207362.2	ENSMUSG00000074405.9	Zfp865	chr7	protein_coding	zinc finger protein 865
chr7	5023654	5024521	+	5023654	5062495	A3SS	0.25	50	50	ENSMUST00000208728.2	ENSMUSG00000035228.16	Ccdc106	chr7	protein_coding	coiled-coil domain containing 106
chr7	5023654	5031990	+	5023654	5062495	A3SS	0.25	50	50	ENSMUST00000208728.2	ENSMUSG00000035228.16	Ccdc106	chr7	protein_coding	coiled-coil domain containing 106
chr7	5061167	5062495	+	5023654	5062495	A5SS	0.5	50	50	ENSMUST00000208728.2	ENSMUSG00000035228.16	Ccdc106	chr7	protein_coding	coiled-coil domain containing 106
chr7	5059865	5060498	+	5059239	5060498	A5SS	0.33	50	50	ENSMUST00000108571.9	ENSMUSG00000035228.16	Ccdc106	chr7	protein_coding	coiled-coil domain containing 106
chr7	5059966	5060498	+	5059239	5060498	A5SS	0.33	50	50	ENSMUST00000108571.9	ENSMUSG00000035228.16	Ccdc106	chr7	protein_coding	coiled-coil domain containing 106
chr7	5059966	5060498	+	5059865	5060498	A5SS	0.33	50	50	ENSMUST00000208042.2	ENSMUSG00000035228.16	Ccdc106	chr7	protein_coding	coiled-coil domain containing 106
chr7	5059966	5060339	+	5059966	5060498	A3SS	0.5	50	50	ENSMUST00000208161.2	ENSMUSG00000035228.16	Ccdc106	chr7	protein_coding	coiled-coil domain containing 106
chr7	5053917	5059864	-	5053917	5059752	A5SS	0.5	50	50	ENSMUST00000123644.3	ENSMUSG00000086604.3	Gm15510	chr7	lncRNA	predicted gene 15510
chr7	5055149	5055804	+	5054713	5055804	A5SS	0.5	50	50	ENSMUST00000069324.7	ENSMUSG00000055633.7	Zfp580	chr7	protein_coding	zinc finger protein 580
chr7	5071182;5071795	5071732;5072443	+	5071182	5072443	cassetteExon	0.5	100	100	ENSMUST00000005041.15	ENSMUSG00000030435.17	U2af2	chr7	protein_coding	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2
chr7	5069537	5070353	+	5069537	5070209	A3SS&ES	0.5	50	50	ENSMUST00000005041.15	ENSMUSG00000030435.17	U2af2	chr7	protein_coding	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2
chr7	5078238	5078467	+	5078226	5078467	A5SS	0.5	50	50	ENSMUST00000005041.15	ENSMUSG00000030435.17	U2af2	chr7	protein_coding	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2
chr7	5071182	5072443	+	5071182	5071732	A3SS	0.5	50	50	ENSMUST00000207926.2	ENSMUSG00000030435.17	U2af2	chr7	protein_coding	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2
chr7	5083476	5086729	+	5083476	5085017	A3SS&ES	0.5	50	50	ENSMUST00000098845.10	ENSMUSG00000035203.17	Epn1	chr7	protein_coding	epsin 1
chr7	5085120	5086729	+	5085120	5086662	A3SS	0.5	50	50	ENSMUST00000098845.10	ENSMUSG00000035203.17	Epn1	chr7	protein_coding	epsin 1
chr7	5086981	5093002	+	5086981	5092918	A3SS	0.5	50	50	ENSMUST00000098845.10	ENSMUSG00000035203.17	Epn1	chr7	protein_coding	epsin 1
chr7	5098752	5098887	+	5098752	5098890	A3SS	0.5	50	50	ENSMUST00000098845.10	ENSMUSG00000035203.17	Epn1	chr7	protein_coding	epsin 1
chr7	5083637	5085017	+	5083476	5085017	A5SS	0.5	50	50	ENSMUST00000098845.10	ENSMUSG00000035203.17	Epn1	chr7	protein_coding	epsin 1
chr7	5083476	5086729	+	5083476;5085120	5085017;5086729	ES	0.5	50	50	ENSMUST00000146317.8	ENSMUSG00000035203.17	Epn1	chr7	protein_coding	epsin 1
chr7	5093167	5095840	+	5093167	5097953	A3SS	0.5	50	50	ENSMUST00000152083.2	ENSMUSG00000035203.17	Epn1	chr7	protein_coding	epsin 1
chr7	5096981	5097953	+	5093167	5097953	A5SS	0.5	50	50	ENSMUST00000152083.2	ENSMUSG00000035203.17	Epn1	chr7	protein_coding	epsin 1
chr7	5113893	5118301	-	5113893	5118283	A5SS	0.5	50	50	ENSMUST00000179971.8	ENSMUSG00000035191.16	Rfpl4	chr7	protein_coding	ret finger protein-like 4
chr7	5118577	5119637	-	5118577	5119869	A5SS	0.5	50	50	ENSMUST00000179971.8	ENSMUSG00000035191.16	Rfpl4	chr7	protein_coding	ret finger protein-like 4
chr7	5150601	5152438	-	5148570	5152438	A3SS	0.5	50	50	ENSMUST00000235536.2	ENSMUSG00000118215.2	Vmn1r55	chr7	protein_coding	vomeronasal 1 receptor 55
chr7	5142281	5148451	-	5146181	5148451	A3SS	0.33	50	50	ENSMUST00000235878.2	ENSMUSG00000118215.2	Vmn1r55	chr7	protein_coding	vomeronasal 1 receptor 55
chr7	5143931	5148451	-	5146181	5148451	A3SS	0.33	50	50	ENSMUST00000235878.2	ENSMUSG00000118215.2	Vmn1r55	chr7	protein_coding	vomeronasal 1 receptor 55
chr7	5142281	5148451	-	5143931	5148451	A3SS	0.33	50	50	ENSMUST00000236042.2	ENSMUSG00000118215.2	Vmn1r55	chr7	protein_coding	vomeronasal 1 receptor 55
chr7	5221747	5222461	+	5221747	5222505	A3SS	0.5	50	50	ENSMUST00000228062.2	ENSMUSG00000091652.3	Vmn1r57	chr7	protein_coding	vomeronasal 1 receptor 57
chr7	5311807	5322151	-	5311807;5320640	5320470;5322151	ES	0.5	50	50	ENSMUST00000045022.9	ENSMUSG00000035177.9	Nlrp2	chr7	protein_coding	NLR family, pyrin domain containing 2
chr7	5301867;5310646	5310542;5311637	-	5301867;5304071	5303901;5311637	MXE	0.5	100	100	ENSMUST00000045022.9	ENSMUSG00000035177.9	Nlrp2	chr7	protein_coding	NLR family, pyrin domain containing 2
chr7	5311807	5322151	-	5311807	5320470	5pMXE	0.5	50	50	ENSMUST00000207685.2	ENSMUSG00000035177.9	Nlrp2	chr7	protein_coding	NLR family, pyrin domain containing 2
chr7	5362093	5362347	+	5353641	5362347	A5SS	0.5	50	50	ENSMUST00000056639.8	ENSMUSG00000048398.8	Gm5065	chr7	protein_coding	predicted gene 5065
chr7	5413380	5416149	-	5414423	5416149	A3SS	0.5	50	50	ENSMUST00000228728.2	ENSMUSG00000078808.6	Vmn1r58	chr7	protein_coding	vomeronasal 1 receptor 58
chr7	5414423	5416000	-	5414423	5416149	A5SS	0.5	50	50	ENSMUST00000228728.2	ENSMUSG00000078808.6	Vmn1r58	chr7	protein_coding	vomeronasal 1 receptor 58
chr7	5414423	5416000	-	5413380	5416000	A3SS	0.5	50	50	ENSMUST00000227549.2	ENSMUSG00000078808.6	Vmn1r58	chr7	protein_coding	vomeronasal 1 receptor 58
chr7	5413380	5416149	-	5413380	5416000	A5SS	0.5	50	50	ENSMUST00000227549.2	ENSMUSG00000078808.6	Vmn1r58	chr7	protein_coding	vomeronasal 1 receptor 58
chr7	5487131	5493456	-	5487131;5491756	5490944;5493456	ES	0.5	50	50	ENSMUST00000233742.2	ENSMUSG00000066820.8	Vmn2r28	chr7	protein_coding	vomeronasal 2, receptor 28
chr7	5487131;5489535	5489308;5490944	-	5487131	5490944	cassetteExon	0.5	100	100	ENSMUST00000233742.2	ENSMUSG00000066820.8	Vmn2r28	chr7	protein_coding	vomeronasal 2, receptor 28
chr7	5484148	5487008	-	5484544	5487008	A3SS	0.5	50	50	ENSMUST00000233742.2	ENSMUSG00000066820.8	Vmn2r28	chr7	protein_coding	vomeronasal 2, receptor 28
chr7	5491756	5493456	-	5487131	5493456	A3SS	0.5	50	50	ENSMUST00000233941.2	ENSMUSG00000066820.8	Vmn2r28	chr7	protein_coding	vomeronasal 2, receptor 28
chr7	5487131	5489308	-	5487131	5493456	A5SS	0.33	50	50	ENSMUST00000233941.2	ENSMUSG00000066820.8	Vmn2r28	chr7	protein_coding	vomeronasal 2, receptor 28
chr7	5487131	5490944	-	5487131	5493456	A5SS	0.33	50	50	ENSMUST00000233941.2	ENSMUSG00000066820.8	Vmn2r28	chr7	protein_coding	vomeronasal 2, receptor 28
chr7	5612155	5616039	-	5612155	5613293	5pMXE	0.5	50	50	ENSMUST00000238042.2	ENSMUSG00000117863.2	Vmn1r61	chr7	protein_coding	vomeronasal 1 receptor 61
chr7	5676669	5677601	+	5676669	5678131	A3SS	0.5	50	50	ENSMUST00000237772.2	ENSMUSG00000092579.3	Vmn1r62	chr7	protein_coding	vomeronasal 1 receptor 62
chr7	6069950	6070789	+	6069950	6075561	A3SS	0.5	50	50	ENSMUST00000037728.13	ENSMUSG00000034690.14	Nlrp4c	chr7	protein_coding	NLR family, pyrin domain containing 4C
chr7	6048552	6063528	+	6048220	6063528	A5SS	0.5	50	50	ENSMUST00000037728.13	ENSMUSG00000034690.14	Nlrp4c	chr7	protein_coding	NLR family, pyrin domain containing 4C
chr7	6145618	6146061	-	6136170	6146061	A3SS	0.5	50	50	ENSMUST00000094870.3	ENSMUSG00000046792.9	Zfp787	chr7	protein_coding	zinc finger protein 787
chr7	6146149	6153979	-	6146149	6158844	A5SS	0.33	50	50	ENSMUST00000094870.3	ENSMUSG00000046792.9	Zfp787	chr7	protein_coding	zinc finger protein 787
chr7	6146149	6158205	-	6146149	6158844	A5SS	0.33	50	50	ENSMUST00000094870.3	ENSMUSG00000046792.9	Zfp787	chr7	protein_coding	zinc finger protein 787
chr7	6146149	6153979	-	6146149	6158205	A5SS	0.33	50	50	ENSMUST00000207315.2	ENSMUSG00000046792.9	Zfp787	chr7	protein_coding	zinc finger protein 787
chr7	6177100	6191133	+	6177100	6186861	3pMXE	0.33	50	50	ENSMUST00000128495.8	ENSMUSG00000044876.16	Zfp444	chr7	protein_coding	zinc finger protein 444
chr7	6177100	6186789	+	6177100	6186861	A3SS	0.33	50	50	ENSMUST00000128495.8	ENSMUSG00000044876.16	Zfp444	chr7	protein_coding	zinc finger protein 444
chr7	6175536	6176981	+	6175398	6176981	A5SS	0.25	50	50	ENSMUST00000128495.8	ENSMUSG00000044876.16	Zfp444	chr7	protein_coding	zinc finger protein 444
chr7	6175536	6186861	+	6177100	6186861	A5SS&ES	0.2	50	50	ENSMUST00000128495.8	ENSMUSG00000044876.16	Zfp444	chr7	protein_coding	zinc finger protein 444
chr7	6175573	6176981	+	6175398	6176981	A5SS	0.25	50	50	ENSMUST00000128495.8	ENSMUSG00000044876.16	Zfp444	chr7	protein_coding	zinc finger protein 444
chr7	6175573	6186861	+	6177100	6186861	A5SS&ES	0.2	50	50	ENSMUST00000128495.8	ENSMUSG00000044876.16	Zfp444	chr7	protein_coding	zinc finger protein 444
chr7	6175649	6176981	+	6175398	6176981	A5SS	0.25	50	50	ENSMUST00000128495.8	ENSMUSG00000044876.16	Zfp444	chr7	protein_coding	zinc finger protein 444
chr7	6184499	6186861	+	6177100	6186861	A5SS	0.2	50	50	ENSMUST00000128495.8	ENSMUSG00000044876.16	Zfp444	chr7	protein_coding	zinc finger protein 444
chr7	6186693	6186861	+	6177100	6186861	A5SS	0.2	50	50	ENSMUST00000128495.8	ENSMUSG00000044876.16	Zfp444	chr7	protein_coding	zinc finger protein 444
chr7	6177100	6191133	+	6177100;6187201	6186789;6191133	ES	0.5	50	50	ENSMUST00000108567.9	ENSMUSG00000044876.16	Zfp444	chr7	protein_coding	zinc finger protein 444
chr7	6187201	6192405	+	6187201;6191241	6191133;6192405	ES	0.5	50	50	ENSMUST00000108567.9	ENSMUSG00000044876.16	Zfp444	chr7	protein_coding	zinc finger protein 444
chr7	6175536	6186861	+	6175536	6176981	A3SS&ES	0.5	50	50	ENSMUST00000108567.9	ENSMUSG00000044876.16	Zfp444	chr7	protein_coding	zinc finger protein 444
chr7	6175573	6176981	+	6175536	6176981	A5SS	0.25	50	50	ENSMUST00000108567.9	ENSMUSG00000044876.16	Zfp444	chr7	protein_coding	zinc finger protein 444
chr7	6175649	6176981	+	6175536	6176981	A5SS	0.25	50	50	ENSMUST00000108567.9	ENSMUSG00000044876.16	Zfp444	chr7	protein_coding	zinc finger protein 444
chr7	6175536;6177100	6176981;6186861	+	6175536	6186861	cassetteExon	0.5	100	100	ENSMUST00000207176.2	ENSMUSG00000044876.16	Zfp444	chr7	protein_coding	zinc finger protein 444
chr7	6175573	6186861	+	6175536	6186861	A5SS	0.2	50	50	ENSMUST00000207176.2	ENSMUSG00000044876.16	Zfp444	chr7	protein_coding	zinc finger protein 444
chr7	6184499	6186861	+	6175536	6186861	A5SS	0.2	50	50	ENSMUST00000207176.2	ENSMUSG00000044876.16	Zfp444	chr7	protein_coding	zinc finger protein 444
chr7	6186693	6186861	+	6175536	6186861	A5SS	0.2	50	50	ENSMUST00000207176.2	ENSMUSG00000044876.16	Zfp444	chr7	protein_coding	zinc finger protein 444
chr7	6175573;6177100	6176981;6186861	+	6175573	6186861	cassetteExon	0.5	100	100	ENSMUST00000054680.12	ENSMUSG00000044876.16	Zfp444	chr7	protein_coding	zinc finger protein 444
chr7	6175573;6177100	6176981;6191133	+	6175573;6187201	6186861;6191133	MXE	0.5	100	100	ENSMUST00000054680.12	ENSMUSG00000044876.16	Zfp444	chr7	protein_coding	zinc finger protein 444
chr7	6184499	6186861	+	6175573	6186861	A5SS	0.2	50	50	ENSMUST00000054680.12	ENSMUSG00000044876.16	Zfp444	chr7	protein_coding	zinc finger protein 444
chr7	6186693	6186861	+	6175573	6186861	A5SS	0.2	50	50	ENSMUST00000054680.12	ENSMUSG00000044876.16	Zfp444	chr7	protein_coding	zinc finger protein 444
chr7	6177100	6191133	+	6177100;6187201	6186861;6191133	ES	0.5	50	50	ENSMUST00000108566.8	ENSMUSG00000044876.16	Zfp444	chr7	protein_coding	zinc finger protein 444
chr7	6175649	6176981	+	6175573	6176981	A5SS	0.25	50	50	ENSMUST00000108566.8	ENSMUSG00000044876.16	Zfp444	chr7	protein_coding	zinc finger protein 444
chr7	6177100	6191133	+	6177100	6186789	3pMXE	0.33	50	50	ENSMUST00000137450.2	ENSMUSG00000044876.16	Zfp444	chr7	protein_coding	zinc finger protein 444
chr7	6177100;6187201	6186789;6192405	+	6177100;6191241	6191133;6192405	MXE	0.5	100	100	ENSMUST00000208192.2	ENSMUSG00000044876.16	Zfp444	chr7	protein_coding	zinc finger protein 444
chr7	6177100;6187201	6186861;6192405	+	6177100;6191241	6191133;6192405	MXE	0.5	100	100	ENSMUST00000208192.2	ENSMUSG00000044876.16	Zfp444	chr7	protein_coding	zinc finger protein 444
chr7	6187201	6192405	+	6187201	6191133	3pMXE	0.5	50	50	ENSMUST00000134933.8	ENSMUSG00000044876.16	Zfp444	chr7	protein_coding	zinc finger protein 444
chr7	6186693	6186861	+	6184499	6186861	A5SS	0.2	50	50	ENSMUST00000134933.8	ENSMUSG00000044876.16	Zfp444	chr7	protein_coding	zinc finger protein 444
chr7	6205883	6214303	+	6205883;6211513	6211465;6214303	ES	0.5	50	50	ENSMUST00000037553.6	ENSMUSG00000034660.9	Galp	chr7	protein_coding	galanin-like peptide
chr7	6225335	6233071	+	6225335;6227758	6227585;6233071	ES	0.5	50	50	ENSMUST00000072662.12	ENSMUSG00000058028.15	Zscan5b	chr7	protein_coding	zinc finger and SCAN domain containing 5B
chr7	6266932	6269829	+	6266932;6269344	6269288;6269829	ES	0.5	50	50	ENSMUST00000121024.8	ENSMUSG00000053367.16	Epp13	chr7	protein_coding	epididymal protein 13
chr7	6277372	6282413	+	6277372;6280540	6280419;6282413	ES	0.5	50	50	ENSMUST00000121024.8	ENSMUSG00000053367.16	Epp13	chr7	protein_coding	epididymal protein 13
chr7	6289653	6292288	+	6289653	6292357	A3SS	0.5	50	50	ENSMUST00000086327.12	ENSMUSG00000054893.16	Zfp667	chr7	protein_coding	zinc finger protein 667
chr7	6296940	6303725	+	6296940	6307587	A3SS	0.5	50	50	ENSMUST00000086327.12	ENSMUSG00000054893.16	Zfp667	chr7	protein_coding	zinc finger protein 667
chr7	6290969	6292357	+	6289653	6292357	A5SS	0.5	50	50	ENSMUST00000086327.12	ENSMUSG00000054893.16	Zfp667	chr7	protein_coding	zinc finger protein 667
chr7	6326422	6326646	-	6320778	6326646	A3SS	0.5	50	50	ENSMUST00000062765.14	ENSMUSG00000030443.17	Zfp583	chr7	protein_coding	zinc finger protein 583
chr7	6326744	6332254	-	6328578	6332254	A3SS&ES	0.5	50	50	ENSMUST00000062765.14	ENSMUSG00000030443.17	Zfp583	chr7	protein_coding	zinc finger protein 583
chr7	6332315	6333069	-	6332315	6334140	A5SS	0.33	50	50	ENSMUST00000062765.14	ENSMUSG00000030443.17	Zfp583	chr7	protein_coding	zinc finger protein 583
chr7	6332315	6334152	-	6332315	6334140	A5SS	0.33	50	50	ENSMUST00000062765.14	ENSMUSG00000030443.17	Zfp583	chr7	protein_coding	zinc finger protein 583
chr7	6332315	6334152	-	6332315	6333069	5pMXE	0.33	50	50	ENSMUST00000108560.8	ENSMUSG00000030443.17	Zfp583	chr7	protein_coding	zinc finger protein 583
chr7	6376252	6381208	+	6376252;6378613	6378518;6381208	ES	0.5	50	50	ENSMUST00000207347.2	ENSMUSG00000055150.16	Zfp78	chr7	protein_coding	zinc finger protein 78
chr7	6366346;6374104	6373958;6374305	+	6366346	6374305	cassetteExon	0.5	100	100	ENSMUST00000207347.2	ENSMUSG00000055150.16	Zfp78	chr7	protein_coding	zinc finger protein 78
chr7	6366438	6374305	+	6366346	6374305	A5SS	0.33	50	50	ENSMUST00000207347.2	ENSMUSG00000055150.16	Zfp78	chr7	protein_coding	zinc finger protein 78
chr7	6366438	6373958	+	6366346	6373958	A5SS	0.5	50	50	ENSMUST00000208763.2	ENSMUSG00000055150.16	Zfp78	chr7	protein_coding	zinc finger protein 78
chr7	6366438	6374305	+	6374104	6374305	A5SS&ES	0.33	50	50	ENSMUST00000208763.2	ENSMUSG00000055150.16	Zfp78	chr7	protein_coding	zinc finger protein 78
chr7	6366438	6374305	+	6366438;6374104	6373958;6374305	ES	0.33	50	50	ENSMUST00000208030.2	ENSMUSG00000055150.16	Zfp78	chr7	protein_coding	zinc finger protein 78
chr7	6366346	6374305	+	6374104	6374305	A5SS&ES	0.33	50	50	ENSMUST00000208030.2	ENSMUSG00000055150.16	Zfp78	chr7	protein_coding	zinc finger protein 78
chr7	6393559	6396366	+	6393559;6395295	6395181;6396366	ES	0.33	50	50	ENSMUST00000081022.9	ENSMUSG00000062861.9	Zfp28	chr7	protein_coding	zinc finger protein 28
chr7	6387265;6387390	6387344;6392432	+	6387265	6392432	cassetteExon	0.5	100	100	ENSMUST00000081022.9	ENSMUSG00000062861.9	Zfp28	chr7	protein_coding	zinc finger protein 28
chr7	6395295;6395712	6395593;6396366	+	6395295	6396366	cassetteExon	0.5	100	100	ENSMUST00000081022.9	ENSMUSG00000062861.9	Zfp28	chr7	protein_coding	zinc finger protein 28
chr7	6386600	6395001	+	6386600	6387174	A3SS&ES	0.5	50	50	ENSMUST00000081022.9	ENSMUSG00000062861.9	Zfp28	chr7	protein_coding	zinc finger protein 28
chr7	6395295	6396475	+	6395295	6396366	A3SS	0.33	50	50	ENSMUST00000081022.9	ENSMUSG00000062861.9	Zfp28	chr7	protein_coding	zinc finger protein 28
chr7	6393559	6396366	+	6395295	6396366	A5SS&ES	0.33	50	50	ENSMUST00000208949.2	ENSMUSG00000062861.9	Zfp28	chr7	protein_coding	zinc finger protein 28
chr7	6393559	6396366	+	6393559	6395181	A3SS&ES	0.5	50	50	ENSMUST00000207465.2	ENSMUSG00000062861.9	Zfp28	chr7	protein_coding	zinc finger protein 28
chr7	6395295	6395593	+	6395295	6396475	A3SS	0.33	50	50	ENSMUST00000207465.2	ENSMUSG00000062861.9	Zfp28	chr7	protein_coding	zinc finger protein 28
chr7	6395712	6396366	+	6393559	6396366	A5SS	0.33	50	50	ENSMUST00000207809.2	ENSMUSG00000062861.9	Zfp28	chr7	protein_coding	zinc finger protein 28
chr7	6430154	6441873	+	6430154	6432279	3pMXE	0.5	50	50	ENSMUST00000161855.8	ENSMUSG00000093536.8	Smim17	chr7	protein_coding	small integral membrane protein 17
chr7	6402914	6411237	+	6402914	6427622	A3SS	0.5	50	50	ENSMUST00000161855.8	ENSMUSG00000093536.8	Smim17	chr7	protein_coding	small integral membrane protein 17
chr7	6415488	6427622	+	6402914	6427622	A5SS	0.33	50	50	ENSMUST00000161855.8	ENSMUSG00000093536.8	Smim17	chr7	protein_coding	small integral membrane protein 17
chr7	6418243	6427622	+	6402914	6427622	A5SS	0.33	50	50	ENSMUST00000161855.8	ENSMUSG00000093536.8	Smim17	chr7	protein_coding	small integral membrane protein 17
chr7	6415488	6427622	+	6418243	6427622	5pMXE	0.33	50	50	ENSMUST00000160218.2	ENSMUSG00000093536.8	Smim17	chr7	protein_coding	small integral membrane protein 17
chr7	6470527;6471133	6471038;6477111	+	6470527	6477111	cassetteExon	0.5	100	100	ENSMUST00000207658.4	ENSMUSG00000054938.8	Olfr1346	chr7	protein_coding	olfactory receptor 1346
chr7	6491850	6502607	-	6491850	6502441	A5SS	0.5	50	50	ENSMUST00000218572.2	ENSMUSG00000034583.10	Olfr1347	chr7	protein_coding	olfactory receptor 1347
chr7	6505223	6511398	-	6505223;6505424	6505311;6511398	ES	0.33	50	50	ENSMUST00000209029.4	ENSMUSG00000093877.5	Olfr1348	chr7	protein_coding	olfactory receptor 1348
chr7	6505223;6506973	6506853;6511398	-	6505223;6505424	6505311;6511398	MXE	0.5	100	100	ENSMUST00000209029.4	ENSMUSG00000093877.5	Olfr1348	chr7	protein_coding	olfactory receptor 1348
chr7	6505424;6506973	6506853;6511398	-	6505424	6511398	cassetteExon	0.5	100	100	ENSMUST00000209029.4	ENSMUSG00000093877.5	Olfr1348	chr7	protein_coding	olfactory receptor 1348
chr7	6505227	6505311	-	6505223	6505311	A3SS	0.5	50	50	ENSMUST00000209029.4	ENSMUSG00000093877.5	Olfr1348	chr7	protein_coding	olfactory receptor 1348
chr7	6511487	6511641	-	6511487	6511646	A5SS	0.25	50	50	ENSMUST00000209029.4	ENSMUSG00000093877.5	Olfr1348	chr7	protein_coding	olfactory receptor 1348
chr7	6511487	6511664	-	6511487	6511646	A5SS	0.25	50	50	ENSMUST00000209029.4	ENSMUSG00000093877.5	Olfr1348	chr7	protein_coding	olfactory receptor 1348
chr7	6511487	6511670	-	6511487	6511646	A5SS	0.25	50	50	ENSMUST00000209029.4	ENSMUSG00000093877.5	Olfr1348	chr7	protein_coding	olfactory receptor 1348
chr7	6505223;6506973	6506853;6511398	-	6505223	6511398	cassetteExon	0.5	100	100	ENSMUST00000214383.2	ENSMUSG00000093877.5	Olfr1348	chr7	protein_coding	olfactory receptor 1348
chr7	6511487	6511641	-	6511487	6511670	A5SS	0.25	50	50	ENSMUST00000213549.2	ENSMUSG00000093877.5	Olfr1348	chr7	protein_coding	olfactory receptor 1348
chr7	6511487	6511664	-	6511487	6511670	A5SS	0.25	50	50	ENSMUST00000213549.2	ENSMUSG00000093877.5	Olfr1348	chr7	protein_coding	olfactory receptor 1348
chr7	6511487	6511641	-	6511487	6511664	A5SS	0.25	50	50	ENSMUST00000207624.2	ENSMUSG00000093877.5	Olfr1348	chr7	protein_coding	olfactory receptor 1348
chr7	6505223;6505424	6505311;6506853	-	6505223	6506853	cassetteExon	0.5	100	100	ENSMUST00000207055.3	ENSMUSG00000093877.5	Olfr1348	chr7	protein_coding	olfactory receptor 1348
chr7	6523071	6525813	-	6523071	6523182	5pMXE	0.5	50	50	ENSMUST00000213504.2	ENSMUSG00000048067.9	Olfr1349	chr7	protein_coding	olfactory receptor 1349
chr7	6523068	6523182	-	6523071	6523182	A3SS	0.5	50	50	ENSMUST00000213504.2	ENSMUSG00000048067.9	Olfr1349	chr7	protein_coding	olfactory receptor 1349
chr7	6523071	6525813	-	6523071;6523293	6523182;6525813	ES	0.33	50	50	ENSMUST00000216447.2	ENSMUSG00000048067.9	Olfr1349	chr7	protein_coding	olfactory receptor 1349
chr7	6525283	6525813	-	6523293	6525813	A3SS	0.33	50	50	ENSMUST00000216447.2	ENSMUSG00000048067.9	Olfr1349	chr7	protein_coding	olfactory receptor 1349
chr7	6523071	6525813	-	6523071;6525283	6523182;6525813	ES	0.33	50	50	ENSMUST00000213656.2	ENSMUSG00000048067.9	Olfr1349	chr7	protein_coding	olfactory receptor 1349
chr7	6525283	6525813	-	6523071	6525813	A3SS	0.33	50	50	ENSMUST00000207820.3	ENSMUSG00000048067.9	Olfr1349	chr7	protein_coding	olfactory receptor 1349
chr7	6567886	6572927	+	6568133	6572927	A5SS	0.5	50	50	ENSMUST00000219278.2	ENSMUSG00000056696.6	Olfr1350	chr7	protein_coding	olfactory receptor 1350
chr7	6687322	6690683	-	6685865	6690683	A3SS	0.5	50	50	ENSMUST00000002336.16	ENSMUSG00000002266.18	Zim1	chr7	protein_coding	zinc finger, imprinted 1
chr7	6715774;6716011	6715949;6719053	-	6715774	6719053	cassetteExon	0.5	100	100	ENSMUST00000239104.2	ENSMUSG00000002265.18	Peg3	chr7	protein_coding	paternally expressed 3
chr7	6721555	6729489	-	6721847	6729489	A3SS	0.5	50	50	ENSMUST00000239104.2	ENSMUSG00000002265.18	Peg3	chr7	protein_coding	paternally expressed 3
chr7	6721555	6726186	-	6721555	6729489	A5SS	0.5	50	50	ENSMUST00000051209.11	ENSMUSG00000002265.18	Peg3	chr7	protein_coding	paternally expressed 3
chr7	6734301	6741806	+	6734301	6740564	A3SS&ES	0.33	50	50	ENSMUST00000200535.6	ENSMUSG00000051527.12	Usp29	chr7	protein_coding	ubiquitin specific peptidase 29
chr7	6734301	6741855	+	6734301	6740564	A3SS&ES	0.33	50	50	ENSMUST00000200535.6	ENSMUSG00000051527.12	Usp29	chr7	protein_coding	ubiquitin specific peptidase 29
chr7	6740633	6741806	+	6740633	6741792	A3SS	0.5	50	50	ENSMUST00000200535.6	ENSMUSG00000051527.12	Usp29	chr7	protein_coding	ubiquitin specific peptidase 29
chr7	6741944	6752894	+	6741944	6911285	A3SS	0.25	50	50	ENSMUST00000200535.6	ENSMUSG00000051527.12	Usp29	chr7	protein_coding	ubiquitin specific peptidase 29
chr7	6741944	6769288	+	6741944	6911285	A3SS	0.25	50	50	ENSMUST00000200535.6	ENSMUSG00000051527.12	Usp29	chr7	protein_coding	ubiquitin specific peptidase 29
chr7	6741944	6930451	+	6741944	6911285	A3SS&ES	0.25	50	50	ENSMUST00000200535.6	ENSMUSG00000051527.12	Usp29	chr7	protein_coding	ubiquitin specific peptidase 29
chr7	6952406	6955221	+	6935682	6955221	A5SS	0.5	50	50	ENSMUST00000200535.6	ENSMUSG00000051527.12	Usp29	chr7	protein_coding	ubiquitin specific peptidase 29
chr7	6734301	6741806	+	6734301	6741855	A3SS	0.33	50	50	ENSMUST00000197117.5	ENSMUSG00000051527.12	Usp29	chr7	protein_coding	ubiquitin specific peptidase 29
chr7	6741944	6752894	+	6741944	6930451	A3SS	0.25	50	50	ENSMUST00000197117.5	ENSMUSG00000051527.12	Usp29	chr7	protein_coding	ubiquitin specific peptidase 29
chr7	6741944	6769288	+	6741944	6930451	A3SS	0.25	50	50	ENSMUST00000197117.5	ENSMUSG00000051527.12	Usp29	chr7	protein_coding	ubiquitin specific peptidase 29
chr7	6734301	6741806	+	6734301;6740633	6740564;6741806	ES	0.5	50	50	ENSMUST00000208662.2	ENSMUSG00000051527.12	Usp29	chr7	protein_coding	ubiquitin specific peptidase 29
chr7	6741944	6769288	+	6741944	6752894	3pMXE	0.25	50	50	ENSMUST00000208662.2	ENSMUSG00000051527.12	Usp29	chr7	protein_coding	ubiquitin specific peptidase 29
chr7	6969037	6978233	-	6969037;6976338	6976161;6978233	ES	0.5	50	50	ENSMUST00000203365.3	ENSMUSG00000108043.3	Zim3	chr7	lncRNA	zinc finger, imprinted 3
chr7	6984356	6989102	+	6984356;6988142	6987999;6989102	ES	0.5	50	50	ENSMUST00000208781.2	ENSMUSG00000109176.2	Zfp264	chr7	transcribed_unprocessed_pseudogene	zinc finger protein 264
chr7	6998524	6999267	+	6998711	6999267	A5SS	0.25	50	50	ENSMUST00000208049.2	ENSMUSG00000070837.6	Aurkc	chr7	protein_coding	aurora kinase C
chr7	6998547	6999267	+	6998711	6999267	A5SS	0.25	50	50	ENSMUST00000208049.2	ENSMUSG00000070837.6	Aurkc	chr7	protein_coding	aurora kinase C
chr7	6998833	6999267	+	6998711	6999267	A5SS	0.25	50	50	ENSMUST00000208049.2	ENSMUSG00000070837.6	Aurkc	chr7	protein_coding	aurora kinase C
chr7	6998524	6999267	+	6998547	6999267	A5SS	0.25	50	50	ENSMUST00000086248.7	ENSMUSG00000070837.6	Aurkc	chr7	protein_coding	aurora kinase C
chr7	6998833	6999267	+	6998547	6999267	A5SS	0.25	50	50	ENSMUST00000086248.7	ENSMUSG00000070837.6	Aurkc	chr7	protein_coding	aurora kinase C
chr7	6998833	6999267	+	6998524	6999267	A5SS	0.25	50	50	ENSMUST00000208518.2	ENSMUSG00000070837.6	Aurkc	chr7	protein_coding	aurora kinase C
chr7	6999300	6999518	+	6999300	7002978	A3SS	0.5	50	50	ENSMUST00000207660.2	ENSMUSG00000070837.6	Aurkc	chr7	protein_coding	aurora kinase C
chr7	7000651	7002978	+	6999300	7002978	A5SS	0.5	50	50	ENSMUST00000207660.2	ENSMUSG00000070837.6	Aurkc	chr7	protein_coding	aurora kinase C
chr7	7136167	7137166	-	7133641	7137166	A3SS	0.5	50	50	ENSMUST00000211240.2	ENSMUSG00000063535.8	Zfp773	chr7	protein_coding	zinc finger protein 773
chr7	7237501	7270218	-	7237501;7243206	7242979;7270218	ES	0.2	50	50	ENSMUST00000209833.2	ENSMUSG00000110105.2	Gm45844	chr7	protein_coding	predicted gene 45844
chr7	7270304;7270917	7270476;7271039	-	7270304	7271039	cassetteExon	0.5	100	100	ENSMUST00000209833.2	ENSMUSG00000110105.2	Gm45844	chr7	protein_coding	predicted gene 45844
chr7	7233262	7237378	-	7216798	7237378	A3SS	0.33	50	50	ENSMUST00000209833.2	ENSMUSG00000110105.2	Gm45844	chr7	protein_coding	predicted gene 45844
chr7	7235230	7237378	-	7216798	7237378	A3SS	0.33	50	50	ENSMUST00000209833.2	ENSMUSG00000110105.2	Gm45844	chr7	protein_coding	predicted gene 45844
chr7	7247293	7270218	-	7243206	7270218	A3SS	0.2	50	50	ENSMUST00000209833.2	ENSMUSG00000110105.2	Gm45844	chr7	protein_coding	predicted gene 45844
chr7	7269076	7270218	-	7243206	7270218	A3SS	0.2	50	50	ENSMUST00000209833.2	ENSMUSG00000110105.2	Gm45844	chr7	protein_coding	predicted gene 45844
chr7	7269881	7270218	-	7243206	7270218	A3SS	0.2	50	50	ENSMUST00000209833.2	ENSMUSG00000110105.2	Gm45844	chr7	protein_coding	predicted gene 45844
chr7	7243206	7244571	-	7243206	7270218	A5SS	0.33	50	50	ENSMUST00000209833.2	ENSMUSG00000110105.2	Gm45844	chr7	protein_coding	predicted gene 45844
chr7	7243206	7244891	-	7243206	7270218	A5SS	0.33	50	50	ENSMUST00000209833.2	ENSMUSG00000110105.2	Gm45844	chr7	protein_coding	predicted gene 45844
chr7	7272332	7281096	-	7272332	7281093	A5SS	0.33	50	50	ENSMUST00000209833.2	ENSMUSG00000110105.2	Gm45844	chr7	protein_coding	predicted gene 45844
chr7	7272332	7281116	-	7272332	7281093	A5SS	0.33	50	50	ENSMUST00000209833.2	ENSMUSG00000110105.2	Gm45844	chr7	protein_coding	predicted gene 45844
chr7	7235230	7237378	-	7233262	7237378	A3SS	0.33	50	50	ENSMUST00000209325.2	ENSMUSG00000110105.2	Gm45844	chr7	protein_coding	predicted gene 45844
chr7	7272332	7281116	-	7272332	7281096	A5SS	0.33	50	50	ENSMUST00000209325.2	ENSMUSG00000110105.2	Gm45844	chr7	protein_coding	predicted gene 45844
chr7	7243206	7270218	-	7243206;7247293	7244891;7270218	ES	0.2	50	50	ENSMUST00000210333.2	ENSMUSG00000110105.2	Gm45844	chr7	protein_coding	predicted gene 45844
chr7	7269076	7270218	-	7247293	7270218	A3SS	0.2	50	50	ENSMUST00000210333.2	ENSMUSG00000110105.2	Gm45844	chr7	protein_coding	predicted gene 45844
chr7	7269881	7270218	-	7247293	7270218	A3SS	0.2	50	50	ENSMUST00000210333.2	ENSMUSG00000110105.2	Gm45844	chr7	protein_coding	predicted gene 45844
chr7	7243206	7244571	-	7243206	7244891	A5SS	0.33	50	50	ENSMUST00000210333.2	ENSMUSG00000110105.2	Gm45844	chr7	protein_coding	predicted gene 45844
chr7	7247293	7270218	-	7237501	7270218	A3SS	0.2	50	50	ENSMUST00000209788.2	ENSMUSG00000110105.2	Gm45844	chr7	protein_coding	predicted gene 45844
chr7	7269076	7270218	-	7237501	7270218	A3SS	0.2	50	50	ENSMUST00000209788.2	ENSMUSG00000110105.2	Gm45844	chr7	protein_coding	predicted gene 45844
chr7	7269881	7270218	-	7237501	7270218	A3SS	0.2	50	50	ENSMUST00000209788.2	ENSMUSG00000110105.2	Gm45844	chr7	protein_coding	predicted gene 45844
chr7	7269881	7270218	-	7269076	7270218	A3SS	0.2	50	50	ENSMUST00000174801.4	ENSMUSG00000098900.3	Gm18190	chr7	transcribed_unprocessed_pseudogene	predicted gene, 18190
chr7	7299068	7301691	-	7299068;7299877	7299723;7301691	ES	0.25	50	50	ENSMUST00000000619.8	ENSMUSG00000000605.10	Clcn4	chr7	protein_coding	chloride channel, voltage-sensitive 4
chr7	7301835	7303650	-	7301835	7302240	5pMXE	0.33	50	50	ENSMUST00000000619.8	ENSMUSG00000000605.10	Clcn4	chr7	protein_coding	chloride channel, voltage-sensitive 4
chr7	7298066	7299723	-	7299068	7299723	A3SS&ES	0.33	50	50	ENSMUST00000000619.8	ENSMUSG00000000605.10	Clcn4	chr7	protein_coding	chloride channel, voltage-sensitive 4
chr7	7299060	7299723	-	7299068	7299723	A3SS	0.33	50	50	ENSMUST00000000619.8	ENSMUSG00000000605.10	Clcn4	chr7	protein_coding	chloride channel, voltage-sensitive 4
chr7	7301195	7301691	-	7299877	7301691	A3SS	0.25	50	50	ENSMUST00000000619.8	ENSMUSG00000000605.10	Clcn4	chr7	protein_coding	chloride channel, voltage-sensitive 4
chr7	7298182	7299056	-	7298182	7298969	A5SS	0.33	50	50	ENSMUST00000000619.8	ENSMUSG00000000605.10	Clcn4	chr7	protein_coding	chloride channel, voltage-sensitive 4
chr7	7301835	7302089	-	7301835	7302240	A5SS	0.33	50	50	ENSMUST00000000619.8	ENSMUSG00000000605.10	Clcn4	chr7	protein_coding	chloride channel, voltage-sensitive 4
chr7	7298182;7299068	7298969;7301691	-	7298182	7301691	cassetteExon	0.5	100	100	ENSMUST00000210444.2	ENSMUSG00000000605.10	Clcn4	chr7	protein_coding	chloride channel, voltage-sensitive 4
chr7	7298182;7299068	7299056;7301691	-	7298182	7301691	cassetteExon	0.5	100	100	ENSMUST00000210444.2	ENSMUSG00000000605.10	Clcn4	chr7	protein_coding	chloride channel, voltage-sensitive 4
chr7	7299877	7301691	-	7298182	7301691	A3SS	0.25	50	50	ENSMUST00000210444.2	ENSMUSG00000000605.10	Clcn4	chr7	protein_coding	chloride channel, voltage-sensitive 4
chr7	7301195	7301691	-	7298182	7301691	A3SS	0.25	50	50	ENSMUST00000210444.2	ENSMUSG00000000605.10	Clcn4	chr7	protein_coding	chloride channel, voltage-sensitive 4
chr7	7301835	7303650	-	7301835	7302089	5pMXE	0.33	50	50	ENSMUST00000210594.2	ENSMUSG00000000605.10	Clcn4	chr7	protein_coding	chloride channel, voltage-sensitive 4
chr7	7301195	7301691	-	7299068	7301691	A3SS	0.25	50	50	ENSMUST00000210594.2	ENSMUSG00000000605.10	Clcn4	chr7	protein_coding	chloride channel, voltage-sensitive 4
chr7	7298182	7301691	-	7298182;7299877	7299056;7301691	ES	0.25	50	50	ENSMUST00000211574.2	ENSMUSG00000000605.10	Clcn4	chr7	protein_coding	chloride channel, voltage-sensitive 4
chr7	7299068	7301691	-	7299877	7301691	A3SS	0.25	50	50	ENSMUST00000211574.2	ENSMUSG00000000605.10	Clcn4	chr7	protein_coding	chloride channel, voltage-sensitive 4
chr7	7299060	7299723	-	7298066	7299723	A3SS	0.33	50	50	ENSMUST00000210362.2	ENSMUSG00000000605.10	Clcn4	chr7	protein_coding	chloride channel, voltage-sensitive 4
chr7	7337207	7340296	-	7337437	7340296	A3SS	0.5	50	50	ENSMUST00000232929.2	ENSMUSG00000070847.14	Vmn2r30	chr7	protein_coding	vomeronasal 2, receptor 30
chr7	7316177	7320071	-	7316717	7320071	A3SS	0.5	50	50	ENSMUST00000174368.9	ENSMUSG00000070847.14	Vmn2r30	chr7	protein_coding	vomeronasal 2, receptor 30
chr7	7366018	7372686	-	7340421	7372686	A3SS	0.5	50	50	ENSMUST00000210877.2	ENSMUSG00000110139.2	Gm45783	chr7	protein_coding	predicted gene 45783
chr7	8187966	8190519	-	8188116	8190519	A3SS	0.33	50	50	ENSMUST00000233668.2	ENSMUSG00000070844.12	Vmn2r42	chr7	protein_coding	vomeronasal 2, receptor 42
chr7	8188656	8190519	-	8188116	8190519	A3SS	0.33	50	50	ENSMUST00000233668.2	ENSMUSG00000070844.12	Vmn2r42	chr7	protein_coding	vomeronasal 2, receptor 42
chr7	8195842	8197316	-	8195842	8197636	A5SS	0.5	50	50	ENSMUST00000233668.2	ENSMUSG00000070844.12	Vmn2r42	chr7	protein_coding	vomeronasal 2, receptor 42
chr7	8188656	8190519	-	8187966	8190519	A3SS	0.33	50	50	ENSMUST00000146278.9	ENSMUSG00000070844.12	Vmn2r42	chr7	protein_coding	vomeronasal 2, receptor 42
chr7	8750769	8752462	-	8750769	8752142	A5SS	0.5	50	50	ENSMUST00000173027.2	ENSMUSG00000091163.5	Gm3962	chr7	transcribed_unprocessed_pseudogene	predicted gene 3962
chr7	8863112	8865574	-	8863112;8865259	8865070;8865574	ES	0.5	50	50	ENSMUST00000172746.8	ENSMUSG00000092490.8	Gm20482	chr7	transcribed_unprocessed_pseudogene	predicted gene 20482
chr7	9782302	9784032	-	9782302	9783984	A5SS	0.5	50	50	ENSMUST00000074943.9	ENSMUSG00000094606.9	Vmn2r50	chr7	protein_coding	vomeronasal 2, receptor 50
chr7	9836582	9839390	-	9836352	9839390	A3SS	0.5	50	50	ENSMUST00000233179.2	ENSMUSG00000058685.8	Vmn2r51	chr7	protein_coding	vomeronasal 2, receptor 51
chr7	9893483	9896817	-	9893087	9896817	A3SS	0.5	50	50	ENSMUST00000232927.2	ENSMUSG00000091930.3	Vmn2r52	chr7	protein_coding	vomeronasal 2, receptor 52
chr7	10009763	10010613	-	10010011	10010613	A3SS	0.5	50	50	ENSMUST00000226202.2	ENSMUSG00000043066.6	Vmn1r66	chr7	protein_coding	vomeronasal 1 receptor 66
chr7	10009763	10010074	-	10009763	10010613	A5SS	0.5	50	50	ENSMUST00000227719.2	ENSMUSG00000043066.6	Vmn1r66	chr7	protein_coding	vomeronasal 1 receptor 66
chr7	10014498	10018395	-	10016228	10018395	A3SS	0.5	50	50	ENSMUST00000237666.2	ENSMUSG00000093781.3	Vmn1r-ps47	chr7	transcribed_unprocessed_pseudogene	vomeronasal 1 receptor, pseudogene 47
chr7	10261873	10263243	-	10263116	10263243	A3SS	0.5	50	50	ENSMUST00000238012.2	ENSMUSG00000047031.6	Vmn1r68	chr7	protein_coding	vomeronasal 1 receptor 68
chr7	10317164;10319335	10319117;10344429	-	10317164	10344429	cassetteExon	0.5	100	100	ENSMUST00000226190.2	ENSMUSG00000091662.10	Vmn1r69	chr7	protein_coding	vomeronasal 1 receptor 69
chr7	10314506	10314883	-	10314733	10314883	A3SS	0.5	50	50	ENSMUST00000226190.2	ENSMUSG00000091662.10	Vmn1r69	chr7	protein_coding	vomeronasal 1 receptor 69
chr7	10314506	10315869	-	10314977	10315869	A3SS&ES	0.5	50	50	ENSMUST00000226190.2	ENSMUSG00000091662.10	Vmn1r69	chr7	protein_coding	vomeronasal 1 receptor 69
chr7	10315806	10317110	-	10315906	10317110	A3SS&ES	0.5	50	50	ENSMUST00000226190.2	ENSMUSG00000091662.10	Vmn1r69	chr7	protein_coding	vomeronasal 1 receptor 69
chr7	10314733	10315296	-	10314733	10314883	A5SS&ES	0.5	50	50	ENSMUST00000226190.2	ENSMUSG00000091662.10	Vmn1r69	chr7	protein_coding	vomeronasal 1 receptor 69
chr7	10314506	10315869	-	10314506;10314977	10314883;10315869	ES	0.5	50	50	ENSMUST00000228296.2	ENSMUSG00000091662.10	Vmn1r69	chr7	protein_coding	vomeronasal 1 receptor 69
chr7	10421745	10421989	+	10421783	10421989	A5SS	0.5	50	50	ENSMUST00000117413.9	ENSMUSG00000034087.15	Nlrp4b	chr7	protein_coding	NLR family, pyrin domain containing 4B
chr7	10459854	10463477	+	10459897	10463477	A5SS	0.33	50	50	ENSMUST00000117413.9	ENSMUSG00000034087.15	Nlrp4b	chr7	protein_coding	NLR family, pyrin domain containing 4B
chr7	10459885	10463477	+	10459897	10463477	A5SS	0.33	50	50	ENSMUST00000117413.9	ENSMUSG00000034087.15	Nlrp4b	chr7	protein_coding	NLR family, pyrin domain containing 4B
chr7	10459885	10463477	+	10459854	10463477	A5SS	0.33	50	50	ENSMUST00000211069.2	ENSMUSG00000034087.15	Nlrp4b	chr7	protein_coding	NLR family, pyrin domain containing 4B
chr7	10483028	10485597	-	10483028;10483247	10483191;10485597	ES	0.33	50	50	ENSMUST00000226874.2	ENSMUSG00000059206.5	Vmn1r71	chr7	protein_coding	vomeronasal 1 receptor 71
chr7	10483247;10485492	10485218;10485597	-	10483247	10485597	cassetteExon	0.5	100	100	ENSMUST00000226874.2	ENSMUSG00000059206.5	Vmn1r71	chr7	protein_coding	vomeronasal 1 receptor 71
chr7	10483247	10483522	-	10483247	10485597	A5SS	0.33	50	50	ENSMUST00000226874.2	ENSMUSG00000059206.5	Vmn1r71	chr7	protein_coding	vomeronasal 1 receptor 71
chr7	10486989	10488091	-	10486989	10487931	A5SS	0.5	50	50	ENSMUST00000226874.2	ENSMUSG00000059206.5	Vmn1r71	chr7	protein_coding	vomeronasal 1 receptor 71
chr7	10482502	10482950	-	10482803	10482950	A3SS	0.5	50	50	ENSMUST00000227003.2	ENSMUSG00000059206.5	Vmn1r71	chr7	protein_coding	vomeronasal 1 receptor 71
chr7	10483247	10483522	-	10483247	10485218	A5SS	0.33	50	50	ENSMUST00000228248.2	ENSMUSG00000059206.5	Vmn1r71	chr7	protein_coding	vomeronasal 1 receptor 71
chr7	10485492	10485597	-	10483028	10485597	A3SS	0.33	50	50	ENSMUST00000228526.2	ENSMUSG00000059206.5	Vmn1r71	chr7	protein_coding	vomeronasal 1 receptor 71
chr7	10483247	10485597	-	10483247;10485492	10483522;10485597	ES	0.33	50	50	ENSMUST00000228098.2	ENSMUSG00000059206.5	Vmn1r71	chr7	protein_coding	vomeronasal 1 receptor 71
chr7	10479808	10481229	-	10480816	10481229	A3SS	0.5	50	50	ENSMUST00000227940.2	ENSMUSG00000059206.5	Vmn1r71	chr7	protein_coding	vomeronasal 1 receptor 71
chr7	10638239	10638896	-	10638239	10638848	A5SS	0.5	50	50	ENSMUST00000210847.2	ENSMUSG00000095339.3	Zscan4b	chr7	protein_coding	zinc finger and SCAN domain containing 4B
chr7	10729067	10729285	-	10725608	10729285	A3SS	0.5	50	50	ENSMUST00000210473.2	ENSMUSG00000110186.2	Gm7789	chr7	transcribed_unprocessed_pseudogene	predicted pseudogene 7789
chr7	10725608	10727914	-	10725608	10729285	A5SS	0.5	50	50	ENSMUST00000210473.2	ENSMUSG00000110186.2	Gm7789	chr7	transcribed_unprocessed_pseudogene	predicted pseudogene 7789
chr7	11043871	11044480	-	11043871	11044528	A5SS	0.5	50	50	ENSMUST00000210521.2	ENSMUSG00000095936.4	Zscan4e	chr7	protein_coding	zinc finger and SCAN domain containing 4E
chr7	11131923;11132146	11132017;11132579	+	11131923	11132579	cassetteExon	0.5	100	100	ENSMUST00000145237.8	ENSMUSG00000070828.11	Zscan4f	chr7	protein_coding	zinc finger and SCAN domain containing 4F
chr7	11404448;11413046	11412825;11413188	-	11404448	11413188	cassetteExon	0.5	100	100	ENSMUST00000227010.2	ENSMUSG00000095430.4	Vmn1r72	chr7	protein_coding	vomeronasal 1 receptor 72
chr7	11608794;11610040	11610001;11611965	+	11608794	11611965	cassetteExon	0.5	100	100	ENSMUST00000227611.2	ENSMUSG00000043308.3	Vmn1r75	chr7	protein_coding	vomeronasal 1 receptor 75
chr7	11608924	11611965	+	11608794	11611965	A5SS	0.33	50	50	ENSMUST00000227611.2	ENSMUSG00000043308.3	Vmn1r75	chr7	protein_coding	vomeronasal 1 receptor 75
chr7	11610040	11611965	+	11608924	11611965	A5SS	0.33	50	50	ENSMUST00000226622.2	ENSMUSG00000043308.3	Vmn1r75	chr7	protein_coding	vomeronasal 1 receptor 75
chr7	11665160	11667212	-	11665160	11667256	A5SS	0.5	50	50	ENSMUST00000226947.2	ENSMUSG00000115267.2	Vmn1r76	chr7	protein_coding	vomeronasal 1 receptor 76
chr7	11770829;11774430	11774273;11775277	+	11770829	11775277	cassetteExon	0.5	100	100	ENSMUST00000228213.2	ENSMUSG00000095864.3	Vmn1r77	chr7	protein_coding	vomeronasal 1 receptor 77
chr7	11774430	11775224	+	11774430	11775277	A3SS	0.5	50	50	ENSMUST00000226525.2	ENSMUSG00000095864.3	Vmn1r77	chr7	protein_coding	vomeronasal 1 receptor 77
chr7	11770829	11775277	+	11770829	11774273	A3SS&ES	0.5	50	50	ENSMUST00000227320.2	ENSMUSG00000095864.3	Vmn1r77	chr7	protein_coding	vomeronasal 1 receptor 77
chr7	11885245	11886389	+	11885414	11886389	A5SS	0.5	50	50	ENSMUST00000228664.2	ENSMUSG00000061602.4	Vmn1r78	chr7	protein_coding	vomeronasal 1 receptor 78
chr7	11905349	11906539	+	11905349;11906186	11906132;11906539	ES	0.5	50	50	ENSMUST00000226953.2	ENSMUSG00000096735.4	Vmn1r79	chr7	protein_coding	vomeronasal 1 receptor 79
chr7	11923312	11926886	+	11923312;11924828	11923781;11926886	ES	0.5	50	50	ENSMUST00000228047.2	ENSMUSG00000115744.2	Vmn1r80	chr7	protein_coding	vomeronasal 1 receptor 80
chr7	11923312	11923898	+	11923312	11923781	A3SS	0.33	50	50	ENSMUST00000228047.2	ENSMUSG00000115744.2	Vmn1r80	chr7	protein_coding	vomeronasal 1 receptor 80
chr7	11923312	11926886	+	11923312;11924828	11923898;11926886	ES	0.5	50	50	ENSMUST00000227240.2	ENSMUSG00000115744.2	Vmn1r80	chr7	protein_coding	vomeronasal 1 receptor 80
chr7	11923312	11923781	+	11923312	11926886	A3SS	0.33	50	50	ENSMUST00000227755.2	ENSMUSG00000115744.2	Vmn1r80	chr7	protein_coding	vomeronasal 1 receptor 80
chr7	11923312	11923898	+	11923312	11926886	A3SS	0.33	50	50	ENSMUST00000227755.2	ENSMUSG00000115744.2	Vmn1r80	chr7	protein_coding	vomeronasal 1 receptor 80
chr7	11924828	11926886	+	11923312	11926886	A5SS	0.5	50	50	ENSMUST00000227755.2	ENSMUSG00000115744.2	Vmn1r80	chr7	protein_coding	vomeronasal 1 receptor 80
chr7	12034495	12038998	+	12034495	12037865	A3SS	0.5	50	50	ENSMUST00000072801.5	ENSMUSG00000058132.6	Vmn1r82	chr7	protein_coding	vomeronasal 1 receptor 82
chr7	12100552;12101439	12101234;12103130	-	12100552	12103130	cassetteExon	0.5	100	100	ENSMUST00000228653.2	ENSMUSG00000066803.3	Vmn1r84	chr7	protein_coding	vomeronasal 1 receptor 84
chr7	12100552;12102041	12101931;12103130	-	12100552	12103130	cassetteExon	0.5	100	100	ENSMUST00000228653.2	ENSMUSG00000066803.3	Vmn1r84	chr7	protein_coding	vomeronasal 1 receptor 84
chr7	12100061	12100472	-	12100043	12100472	A3SS	0.5	50	50	ENSMUST00000228653.2	ENSMUSG00000066803.3	Vmn1r84	chr7	protein_coding	vomeronasal 1 receptor 84
chr7	12100552;12101439	12101234;12103130	-	12100552;12102041	12101931;12103130	MXE	0.5	100	100	ENSMUST00000227427.2	ENSMUSG00000066803.3	Vmn1r84	chr7	protein_coding	vomeronasal 1 receptor 84
chr7	12151145	12155735	-	12151145;12152593	12152470;12155735	ES	0.5	50	50	ENSMUST00000080348.12	ENSMUSG00000034071.16	Zfp551	chr7	protein_coding	zinc fingr protein 551
chr7	12152593	12155690	-	12152593	12155735	A5SS	0.5	50	50	ENSMUST00000080348.12	ENSMUSG00000034071.16	Zfp551	chr7	protein_coding	zinc fingr protein 551
chr7	12151145	12155735	-	12151145	12152470	A5SS&ES	0.5	50	50	ENSMUST00000123877.2	ENSMUSG00000034071.16	Zfp551	chr7	protein_coding	zinc fingr protein 551
chr7	12214953;12215108	12215045;12223497	+	12214953	12223497	cassetteExon	0.5	100	100	ENSMUST00000098822.10	ENSMUSG00000030386.20	Zfp606	chr7	protein_coding	zinc finger protein 606
chr7	12336128	12340187	-	12335373	12340187	A3SS	0.5	50	50	ENSMUST00000233892.2	ENSMUSG00000096002.3	Vmn2r53	chr7	protein_coding	vomeronasal 2, receptor 53
chr7	12392536	12399390	-	12386571	12399390	A3SS	0.5	50	50	ENSMUST00000172743.9	ENSMUSG00000091045.10	Vmn2r55	chr7	protein_coding	vomeronasal 2, receptor 55
chr7	12392536	12399390	-	12392536	12401994	A5SS	0.5	50	50	ENSMUST00000233763.2	ENSMUSG00000091045.10	Vmn2r55	chr7	protein_coding	vomeronasal 2, receptor 55
chr7	12444319	12446877	-	12444319;12444977	12444941;12446877	ES	0.5	50	50	ENSMUST00000233304.2	ENSMUSG00000090762.3	Vmn2r56	chr7	protein_coding	vomeronasal 2, receptor 56
chr7	12447067	12449277	-	12447067	12449154	A5SS	0.5	50	50	ENSMUST00000233304.2	ENSMUSG00000090762.3	Vmn2r56	chr7	protein_coding	vomeronasal 2, receptor 56
chr7	12507517	12507877	-	12507517	12508040	A5SS	0.5	50	50	ENSMUST00000046245.6	ENSMUSG00000070822.6	Zscan18	chr7	protein_coding	zinc finger and SCAN domain containing 18
chr7	12509585	12537521	-	12509585	12514499	5pMXE	0.5	50	50	ENSMUST00000211392.2	ENSMUSG00000070822.6	Zscan18	chr7	protein_coding	zinc finger and SCAN domain containing 18
chr7	12541900	12543624	-	12541900	12544733	A5SS	0.5	50	50	ENSMUST00000108546.2	ENSMUSG00000057894.11	Zfp329	chr7	protein_coding	zinc finger protein 329
chr7	12569454	12569882	+	12569454	12570220	A3SS	0.5	50	50	ENSMUST00000004614.15	ENSMUSG00000058638.15	Zfp110	chr7	protein_coding	zinc finger protein 110
chr7	12570346	12570900	+	12570346	12571016	A3SS	0.5	50	50	ENSMUST00000004614.15	ENSMUSG00000058638.15	Zfp110	chr7	protein_coding	zinc finger protein 110
chr7	12631870	12640161	+	12631870;12638012	12637528;12640161	ES	0.33	50	50	ENSMUST00000055528.11	ENSMUSG00000054715.12	Zscan22	chr7	protein_coding	zinc finger and SCAN domain containing 22
chr7	12631804	12637528	+	12631870	12637528	A5SS	0.5	50	50	ENSMUST00000055528.11	ENSMUSG00000054715.12	Zscan22	chr7	protein_coding	zinc finger and SCAN domain containing 22
chr7	12631907	12640161	+	12638012	12640161	A5SS&ES	0.33	50	50	ENSMUST00000055528.11	ENSMUSG00000054715.12	Zscan22	chr7	protein_coding	zinc finger and SCAN domain containing 22
chr7	12631870	12640161	+	12631907	12640161	A5SS	0.33	50	50	ENSMUST00000117189.2	ENSMUSG00000054715.12	Zscan22	chr7	protein_coding	zinc finger and SCAN domain containing 22
chr7	12631870	12640161	+	12638012	12640161	A5SS&ES	0.33	50	50	ENSMUST00000120809.2	ENSMUSG00000054715.12	Zscan22	chr7	protein_coding	zinc finger and SCAN domain containing 22
chr7	12656315	12656900	+	12656349	12656900	A5SS	0.25	50	50	ENSMUST00000108539.8	ENSMUSG00000012848.16	Rps5	chr7	protein_coding	ribosomal protein S5
chr7	12656447	12656900	+	12656349	12656900	A5SS	0.25	50	50	ENSMUST00000108539.8	ENSMUSG00000012848.16	Rps5	chr7	protein_coding	ribosomal protein S5
chr7	12656475	12656900	+	12656349	12656900	A5SS	0.25	50	50	ENSMUST00000108539.8	ENSMUSG00000012848.16	Rps5	chr7	protein_coding	ribosomal protein S5
chr7	12656447	12656900	+	12656315	12656900	A5SS	0.25	50	50	ENSMUST00000004554.14	ENSMUSG00000012848.16	Rps5	chr7	protein_coding	ribosomal protein S5
chr7	12656475	12656900	+	12656315	12656900	A5SS	0.25	50	50	ENSMUST00000004554.14	ENSMUSG00000012848.16	Rps5	chr7	protein_coding	ribosomal protein S5
chr7	12656447	12656900	+	12656475	12656900	A5SS	0.25	50	50	ENSMUST00000147435.8	ENSMUSG00000012848.16	Rps5	chr7	protein_coding	ribosomal protein S5
chr7	12700226	12703291	+	12700226;12702848	12702722;12703291	ES	0.33	50	50	ENSMUST00000038701.8	ENSMUSG00000004500.10	Zfp324	chr7	protein_coding	zinc finger protein 324
chr7	12702848	12704517	+	12702848	12703291	A3SS&ES	0.5	50	50	ENSMUST00000038701.8	ENSMUSG00000004500.10	Zfp324	chr7	protein_coding	zinc finger protein 324
chr7	12702895	12703291	+	12702848	12703291	A5SS	0.33	50	50	ENSMUST00000038701.8	ENSMUSG00000004500.10	Zfp324	chr7	protein_coding	zinc finger protein 324
chr7	12700226;12702895	12702722;12703291	+	12700226	12703291	cassetteExon	0.5	100	100	ENSMUST00000124387.2	ENSMUSG00000004500.10	Zfp324	chr7	protein_coding	zinc finger protein 324
chr7	12700226	12703291	+	12700226	12702722	A3SS&ES	0.5	50	50	ENSMUST00000210619.2	ENSMUSG00000004500.10	Zfp324	chr7	protein_coding	zinc finger protein 324
chr7	12713305	12713841	+	12713305	12713378	A3SS&ES	0.5	50	50	ENSMUST00000108535.8	ENSMUSG00000033961.17	Zfp446	chr7	protein_coding	zinc finger protein 446
chr7	12712039	12712925	+	12712145	12712925	A5SS	0.5	50	50	ENSMUST00000108535.8	ENSMUSG00000033961.17	Zfp446	chr7	protein_coding	zinc finger protein 446
chr7	12714920	12715773	+	12713906	12715773	A5SS	0.5	50	50	ENSMUST00000108535.8	ENSMUSG00000033961.17	Zfp446	chr7	protein_coding	zinc finger protein 446
chr7	12728965	12731305	-	12728965;12730367	12730158;12731305	ES	0.5	50	50	ENSMUST00000032539.14	ENSMUSG00000030382.16	Slc27a5	chr7	protein_coding	solute carrier family 27 (fatty acid transporter), member 5
chr7	12728965	12731305	-	12728965	12730158	5pMXE	0.5	50	50	ENSMUST00000155192.2	ENSMUSG00000030382.16	Slc27a5	chr7	protein_coding	solute carrier family 27 (fatty acid transporter), member 5
chr7	12758988	12759231	+	12733159	12759231	A5SS	0.5	50	50	ENSMUST00000209577.2	ENSMUSG00000005566.15	Trim28	chr7	protein_coding	tripartite motif-containing 28
chr7	12742256	12743541	-	12742256	12743609	A5SS	0.25	50	50	ENSMUST00000210282.2	ENSMUSG00000049600.9	Zbtb45	chr7	protein_coding	zinc finger and BTB domain containing 45
chr7	12742256	12743563	-	12742256	12743609	A5SS	0.25	50	50	ENSMUST00000210282.2	ENSMUSG00000049600.9	Zbtb45	chr7	protein_coding	zinc finger and BTB domain containing 45
chr7	12742256	12743693	-	12742256	12743609	A5SS	0.25	50	50	ENSMUST00000210282.2	ENSMUSG00000049600.9	Zbtb45	chr7	protein_coding	zinc finger and BTB domain containing 45
chr7	12742256	12743541	-	12742256	12743563	A5SS	0.25	50	50	ENSMUST00000172240.2	ENSMUSG00000049600.9	Zbtb45	chr7	protein_coding	zinc finger and BTB domain containing 45
chr7	12742256	12743693	-	12742256	12743563	A5SS	0.25	50	50	ENSMUST00000172240.2	ENSMUSG00000049600.9	Zbtb45	chr7	protein_coding	zinc finger and BTB domain containing 45
chr7	12742256	12743693	-	12742256	12743541	A5SS	0.25	50	50	ENSMUST00000209997.2	ENSMUSG00000049600.9	Zbtb45	chr7	protein_coding	zinc finger and BTB domain containing 45
chr7	12766492	12767756	-	12766492;12766748	12766569;12767756	ES	0.33	50	50	ENSMUST00000210587.2	ENSMUSG00000033916.6	Chmp2a	chr7	protein_coding	charged multivesicular body protein 2A
chr7	12766492	12766719	-	12766492	12766569	A5SS	0.33	50	50	ENSMUST00000210587.2	ENSMUSG00000033916.6	Chmp2a	chr7	protein_coding	charged multivesicular body protein 2A
chr7	12767969	12768562	-	12767969	12768429	A5SS	0.5	50	50	ENSMUST00000210587.2	ENSMUSG00000033916.6	Chmp2a	chr7	protein_coding	charged multivesicular body protein 2A
chr7	12766277	12767756	-	12766277;12766492	12766362;12767756	ES	0.33	50	50	ENSMUST00000211344.2	ENSMUSG00000033916.6	Chmp2a	chr7	protein_coding	charged multivesicular body protein 2A
chr7	12766492;12766748	12766719;12767756	-	12766492	12767756	cassetteExon	0.5	100	100	ENSMUST00000211344.2	ENSMUSG00000033916.6	Chmp2a	chr7	protein_coding	charged multivesicular body protein 2A
chr7	12766277	12767756	-	12766277;12766748	12766362;12767756	ES	0.33	50	50	ENSMUST00000209487.2	ENSMUSG00000033916.6	Chmp2a	chr7	protein_coding	charged multivesicular body protein 2A
chr7	12766492	12767756	-	12766748	12767756	A3SS	0.33	50	50	ENSMUST00000209487.2	ENSMUSG00000033916.6	Chmp2a	chr7	protein_coding	charged multivesicular body protein 2A
chr7	12770587	12771143	-	12770587	12771548	A5SS	0.25	50	50	ENSMUST00000165394.9	ENSMUSG00000005575.17	Ube2m	chr7	protein_coding	ubiquitin-conjugating enzyme E2M
chr7	12770587	12771482	-	12770587	12771548	A5SS	0.25	50	50	ENSMUST00000165394.9	ENSMUSG00000005575.17	Ube2m	chr7	protein_coding	ubiquitin-conjugating enzyme E2M
chr7	12770587	12771522	-	12770587	12771548	A5SS	0.25	50	50	ENSMUST00000165394.9	ENSMUSG00000005575.17	Ube2m	chr7	protein_coding	ubiquitin-conjugating enzyme E2M
chr7	12770587	12771143	-	12770587	12771522	A5SS	0.25	50	50	ENSMUST00000131837.8	ENSMUSG00000005575.17	Ube2m	chr7	protein_coding	ubiquitin-conjugating enzyme E2M
chr7	12770587	12771482	-	12770587	12771522	A5SS	0.25	50	50	ENSMUST00000131837.8	ENSMUSG00000005575.17	Ube2m	chr7	protein_coding	ubiquitin-conjugating enzyme E2M
chr7	12770587	12771143	-	12770587	12771482	A5SS	0.25	50	50	ENSMUST00000125964.8	ENSMUSG00000005575.17	Ube2m	chr7	protein_coding	ubiquitin-conjugating enzyme E2M
chr7	12778627	12785418	-	12778627;12779759	12779660;12785418	ES	0.25	50	50	ENSMUST00000069289.15	ENSMUSG00000030380.18	Mzf1	chr7	protein_coding	myeloid zinc finger 1
chr7	12785730	12786670	-	12785730;12786293	12786110;12786670	ES	0.5	50	50	ENSMUST00000069289.15	ENSMUSG00000030380.18	Mzf1	chr7	protein_coding	myeloid zinc finger 1
chr7	12778473	12785418	-	12779759	12785418	A3SS&ES	0.25	50	50	ENSMUST00000069289.15	ENSMUSG00000030380.18	Mzf1	chr7	protein_coding	myeloid zinc finger 1
chr7	12779229	12785418	-	12779759	12785418	A3SS&ES	0.25	50	50	ENSMUST00000069289.15	ENSMUSG00000030380.18	Mzf1	chr7	protein_coding	myeloid zinc finger 1
chr7	12778473	12785418	-	12778627	12785418	A3SS	0.25	50	50	ENSMUST00000182515.8	ENSMUSG00000030380.18	Mzf1	chr7	protein_coding	myeloid zinc finger 1
chr7	12779229	12785418	-	12778627	12785418	A3SS	0.25	50	50	ENSMUST00000182515.8	ENSMUSG00000030380.18	Mzf1	chr7	protein_coding	myeloid zinc finger 1
chr7	12779229	12785418	-	12778473	12785418	A3SS	0.25	50	50	ENSMUST00000182293.8	ENSMUSG00000030380.18	Mzf1	chr7	protein_coding	myeloid zinc finger 1
chr7	12785730	12786670	-	12785730	12786110	A5SS	0.5	50	50	ENSMUST00000182293.8	ENSMUSG00000030380.18	Mzf1	chr7	protein_coding	myeloid zinc finger 1
chr7	12837549	12853559	-	12837549;12838631	12838500;12853559	ES	0.33	50	50	ENSMUST00000227220.2	ENSMUSG00000070816.4	Vmn1r86	chr7	protein_coding	vomeronasal 1 receptor 86
chr7	12836659	12853559	-	12838631	12853559	A3SS&ES	0.33	50	50	ENSMUST00000227220.2	ENSMUSG00000070816.4	Vmn1r86	chr7	protein_coding	vomeronasal 1 receptor 86
chr7	12837549	12853559	-	12836659	12853559	A3SS	0.33	50	50	ENSMUST00000227700.2	ENSMUSG00000070816.4	Vmn1r86	chr7	protein_coding	vomeronasal 1 receptor 86
chr7	12871297	12873964	-	12866544	12873964	A3SS	0.5	50	50	ENSMUST00000211249.3	ENSMUSG00000070815.4	Vmn1r87	chr7	protein_coding	vomeronasal 1 receptor 87
chr7	12866544	12867814	-	12866544	12873964	A5SS	0.33	50	50	ENSMUST00000211249.3	ENSMUSG00000070815.4	Vmn1r87	chr7	protein_coding	vomeronasal 1 receptor 87
chr7	12866544	12873806	-	12866544	12873964	A5SS	0.33	50	50	ENSMUST00000211249.3	ENSMUSG00000070815.4	Vmn1r87	chr7	protein_coding	vomeronasal 1 receptor 87
chr7	12866544	12873964	-	12866544;12871297	12867814;12873964	ES	0.5	50	50	ENSMUST00000227443.2	ENSMUSG00000070815.4	Vmn1r87	chr7	protein_coding	vomeronasal 1 receptor 87
chr7	12866544	12873806	-	12866544	12867814	A5SS&ES	0.33	50	50	ENSMUST00000227443.2	ENSMUSG00000070815.4	Vmn1r87	chr7	protein_coding	vomeronasal 1 receptor 87
chr7	12893709	12911126	+	12893709;12904365	12904129;12911126	ES	0.5	50	50	ENSMUST00000236472.2	ENSMUSG00000117853.2	Vmn1r88	chr7	protein_coding	vomeronasal 1 receptor, 88
chr7	12947244;12947594	12947526;12950763	+	12947244	12950763	cassetteExon	0.5	100	100	ENSMUST00000226717.2	ENSMUSG00000095629.3	Vmn1r89	chr7	protein_coding	vomeronasal 1 receptor 89
chr7	12947244	12952891	+	12947244	12950763	A3SS	0.2	50	50	ENSMUST00000226717.2	ENSMUSG00000095629.3	Vmn1r89	chr7	protein_coding	vomeronasal 1 receptor 89
chr7	12947244	12953535	+	12947244	12950763	A3SS	0.2	50	50	ENSMUST00000226717.2	ENSMUSG00000095629.3	Vmn1r89	chr7	protein_coding	vomeronasal 1 receptor 89
chr7	12947244	12953898	+	12947244	12950763	A3SS	0.2	50	50	ENSMUST00000226717.2	ENSMUSG00000095629.3	Vmn1r89	chr7	protein_coding	vomeronasal 1 receptor 89
chr7	12947244	12952891	+	12947244	12947526	A3SS&ES	0.2	50	50	ENSMUST00000227176.2	ENSMUSG00000095629.3	Vmn1r89	chr7	protein_coding	vomeronasal 1 receptor 89
chr7	12947244	12953535	+	12947244	12947526	A3SS&ES	0.2	50	50	ENSMUST00000227176.2	ENSMUSG00000095629.3	Vmn1r89	chr7	protein_coding	vomeronasal 1 receptor 89
chr7	12947244	12953898	+	12947244	12947526	A3SS&ES	0.2	50	50	ENSMUST00000227176.2	ENSMUSG00000095629.3	Vmn1r89	chr7	protein_coding	vomeronasal 1 receptor 89
chr7	12947594	12952891	+	12947594	12950763	A3SS	0.33	50	50	ENSMUST00000227176.2	ENSMUSG00000095629.3	Vmn1r89	chr7	protein_coding	vomeronasal 1 receptor 89
chr7	12947594	12953535	+	12947594	12950763	A3SS	0.33	50	50	ENSMUST00000227176.2	ENSMUSG00000095629.3	Vmn1r89	chr7	protein_coding	vomeronasal 1 receptor 89
chr7	12947244;12947594	12947526;12952891	+	12947244	12952891	cassetteExon	0.5	100	100	ENSMUST00000227239.2	ENSMUSG00000095629.3	Vmn1r89	chr7	protein_coding	vomeronasal 1 receptor 89
chr7	12947244	12953535	+	12947244	12952891	A3SS	0.2	50	50	ENSMUST00000227239.2	ENSMUSG00000095629.3	Vmn1r89	chr7	protein_coding	vomeronasal 1 receptor 89
chr7	12947244	12953898	+	12947244	12952891	A3SS	0.2	50	50	ENSMUST00000227239.2	ENSMUSG00000095629.3	Vmn1r89	chr7	protein_coding	vomeronasal 1 receptor 89
chr7	12947244	12953535	+	12947244;12947594	12947526;12953535	ES	0.5	50	50	ENSMUST00000227276.2	ENSMUSG00000095629.3	Vmn1r89	chr7	protein_coding	vomeronasal 1 receptor 89
chr7	12947244	12950763	+	12947244	12947526	A3SS&ES	0.2	50	50	ENSMUST00000227276.2	ENSMUSG00000095629.3	Vmn1r89	chr7	protein_coding	vomeronasal 1 receptor 89
chr7	12947594	12952891	+	12947594	12953535	A3SS	0.33	50	50	ENSMUST00000227276.2	ENSMUSG00000095629.3	Vmn1r89	chr7	protein_coding	vomeronasal 1 receptor 89
chr7	12947244	12953535	+	12947244	12953898	A3SS	0.2	50	50	ENSMUST00000227319.2	ENSMUSG00000095629.3	Vmn1r89	chr7	protein_coding	vomeronasal 1 receptor 89
chr7	12947244	12952891	+	12947594	12952891	A5SS	0.5	50	50	ENSMUST00000228795.2	ENSMUSG00000095629.3	Vmn1r89	chr7	protein_coding	vomeronasal 1 receptor 89
chr7	12947244	12950763	+	12947594	12950763	A5SS	0.5	50	50	ENSMUST00000228825.2	ENSMUSG00000095629.3	Vmn1r89	chr7	protein_coding	vomeronasal 1 receptor 89
chr7	12995566	13003460	-	12995566	13003261	A5SS	0.5	50	50	ENSMUST00000119139.10	ENSMUSG00000070814.18	Zswim9	chr7	protein_coding	zinc finger SWIM-type containing 9
chr7	13011354	13012270	-	13011354	13012570	A5SS	0.33	50	50	ENSMUST00000119558.9	ENSMUSG00000070814.18	Zswim9	chr7	protein_coding	zinc finger SWIM-type containing 9
chr7	13011354	13012557	-	13011354	13012570	A5SS	0.33	50	50	ENSMUST00000119558.9	ENSMUSG00000070814.18	Zswim9	chr7	protein_coding	zinc finger SWIM-type containing 9
chr7	13011354	13012557	-	13011354	13012270	5pMXE	0.33	50	50	ENSMUST00000137574.2	ENSMUSG00000070814.18	Zswim9	chr7	protein_coding	zinc finger SWIM-type containing 9
chr7	13022685	13023314	+	13022685	13023320	A3SS	0.5	50	50	ENSMUST00000177588.10	ENSMUSG00000056394.21	Lig1	chr7	protein_coding	ligase I, DNA, ATP-dependent
chr7	13012885	13014074	+	13011455	13014074	A5SS	0.33	50	50	ENSMUST00000177588.10	ENSMUSG00000056394.21	Lig1	chr7	protein_coding	ligase I, DNA, ATP-dependent
chr7	13013399	13014074	+	13011455	13014074	A5SS	0.33	50	50	ENSMUST00000177588.10	ENSMUSG00000056394.21	Lig1	chr7	protein_coding	ligase I, DNA, ATP-dependent
chr7	13013399	13014074	+	13012885	13014074	A5SS	0.33	50	50	ENSMUST00000098814.13	ENSMUSG00000056394.21	Lig1	chr7	protein_coding	ligase I, DNA, ATP-dependent
chr7	13062787	13063573	+	13059702	13063573	A5SS	0.33	50	50	ENSMUST00000167232.8	ENSMUSG00000033847.16	Pla2g4c	chr7	protein_coding	phospholipase A2, group IVC (cytosolic, calcium-independent)
chr7	13063341	13063573	+	13059702	13063573	A5SS	0.33	50	50	ENSMUST00000167232.8	ENSMUSG00000033847.16	Pla2g4c	chr7	protein_coding	phospholipase A2, group IVC (cytosolic, calcium-independent)
chr7	13063341	13063573	+	13062787	13063573	A5SS	0.33	50	50	ENSMUST00000108257.3	ENSMUSG00000033847.16	Pla2g4c	chr7	protein_coding	phospholipase A2, group IVC (cytosolic, calcium-independent)
chr7	13132295	13135156	+	13132295;13134660	13134630;13135156	ES	0.5	50	50	ENSMUST00000005791.14	ENSMUSG00000005649.18	Cabp5	chr7	protein_coding	calcium binding protein 5
chr7	13192200	13206061	+	13192200;13204253	13204224;13206061	ES	0.5	50	50	ENSMUST00000098811.4	ENSMUSG00000074378.6	Bsph1	chr7	protein_coding	binder of sperm protein homolog 1
chr7	13290719	13295257	-	13290777	13295257	A3SS	0.5	50	50	ENSMUST00000108526.6	ENSMUSG00000078800.6	Bsph2	chr7	protein_coding	binder of sperm protein homolog 2
chr7	13956514;13959964	13959787;13970528	-	13956514	13970528	cassetteExon	0.5	100	100	ENSMUST00000184731.8	ENSMUSG00000070810.11	Sult2a6	chr7	protein_coding	sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 6
chr7	13970622;13984383	13984257;13987329	-	13970622	13987329	cassetteExon	0.5	100	100	ENSMUST00000184731.8	ENSMUSG00000070810.11	Sult2a6	chr7	protein_coding	sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 6
chr7	14147722	14157362	-	14147722;14150237	14150143;14157362	ES	0.5	50	50	ENSMUST00000168252.9	ENSMUSG00000030378.16	Sult2a8	chr7	protein_coding	sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 8
chr7	14161975	14178795	-	14161975	14172381	5pMXE	0.16	50	50	ENSMUST00000168252.9	ENSMUSG00000030378.16	Sult2a8	chr7	protein_coding	sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 8
chr7	14161975	14180367	-	14161975	14172381	5pMXE	0.16	50	50	ENSMUST00000168252.9	ENSMUSG00000030378.16	Sult2a8	chr7	protein_coding	sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 8
chr7	14161975	14180521	-	14161975	14172381	5pMXE	0.16	50	50	ENSMUST00000168252.9	ENSMUSG00000030378.16	Sult2a8	chr7	protein_coding	sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 8
chr7	14161975;14171439	14171410;14172381	-	14161975	14172381	cassetteExon	0.5	100	100	ENSMUST00000168252.9	ENSMUSG00000030378.16	Sult2a8	chr7	protein_coding	sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 8
chr7	14161975	14170312	-	14161975	14172381	A5SS	0.16	50	50	ENSMUST00000168252.9	ENSMUSG00000030378.16	Sult2a8	chr7	protein_coding	sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 8
chr7	14161975	14180521	-	14161975	14180367	5pMXE	0.16	50	50	ENSMUST00000209425.2	ENSMUSG00000030378.16	Sult2a8	chr7	protein_coding	sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 8
chr7	14161975	14170312	-	14161975	14180367	A5SS	0.16	50	50	ENSMUST00000209425.2	ENSMUSG00000030378.16	Sult2a8	chr7	protein_coding	sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 8
chr7	14161975	14171410	-	14161975	14180367	A5SS	0.16	50	50	ENSMUST00000209425.2	ENSMUSG00000030378.16	Sult2a8	chr7	protein_coding	sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 8
chr7	14161975	14178795	-	14161975	14180367	A5SS	0.16	50	50	ENSMUST00000209425.2	ENSMUSG00000030378.16	Sult2a8	chr7	protein_coding	sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 8
chr7	14147722	14157362	-	14150237	14157362	3pMXE	0.5	50	50	ENSMUST00000125941.3	ENSMUSG00000030378.16	Sult2a8	chr7	protein_coding	sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 8
chr7	14161975	14170312	-	14161975	14180521	A5SS	0.16	50	50	ENSMUST00000125941.3	ENSMUSG00000030378.16	Sult2a8	chr7	protein_coding	sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 8
chr7	14161975	14171410	-	14161975	14180521	A5SS	0.16	50	50	ENSMUST00000125941.3	ENSMUSG00000030378.16	Sult2a8	chr7	protein_coding	sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 8
chr7	14161975	14178795	-	14161975	14180521	A5SS	0.16	50	50	ENSMUST00000125941.3	ENSMUSG00000030378.16	Sult2a8	chr7	protein_coding	sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 8
chr7	14161975	14171410	-	14161975	14170312	5pMXE	0.16	50	50	ENSMUST00000211800.2	ENSMUSG00000030378.16	Sult2a8	chr7	protein_coding	sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 8
chr7	14161975	14178795	-	14161975	14170312	5pMXE	0.16	50	50	ENSMUST00000211800.2	ENSMUSG00000030378.16	Sult2a8	chr7	protein_coding	sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 8
chr7	14161975	14171410	-	14161975	14178795	A5SS	0.16	50	50	ENSMUST00000209972.2	ENSMUSG00000030378.16	Sult2a8	chr7	protein_coding	sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 8
chr7	14207359	14210951	-	14199196	14210951	A3SS	0.5	50	50	ENSMUST00000210034.2	ENSMUSG00000094156.3	Sult2a7	chr7	protein_coding	sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 7
chr7	14199196	14203933	-	14199196	14210951	A5SS	0.5	50	50	ENSMUST00000210034.2	ENSMUSG00000094156.3	Sult2a7	chr7	protein_coding	sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 7
chr7	14225851	14226764	-	14225851	14227938	A5SS	0.5	50	50	ENSMUST00000210034.2	ENSMUSG00000094156.3	Sult2a7	chr7	protein_coding	sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 7
chr7	14337115	14341165	-	14337115;14340567	14340491;14341165	ES	0.5	50	50	ENSMUST00000044683.12	ENSMUSG00000041596.13	Nlrp5-ps	chr7	transcribed_unprocessed_pseudogene	NLR family, pyrin domain containing 5, pseudogene
chr7	14290291	14297217	-	14264938	14297217	A3SS	0.1	50	50	ENSMUST00000044683.12	ENSMUSG00000041596.13	Nlrp5-ps	chr7	transcribed_unprocessed_pseudogene	NLR family, pyrin domain containing 5, pseudogene
chr7	14295857	14297217	-	14264938	14297217	A3SS	0.1	50	50	ENSMUST00000044683.12	ENSMUSG00000041596.13	Nlrp5-ps	chr7	transcribed_unprocessed_pseudogene	NLR family, pyrin domain containing 5, pseudogene
chr7	14296084	14297217	-	14264938	14297217	A3SS	0.1	50	50	ENSMUST00000044683.12	ENSMUSG00000041596.13	Nlrp5-ps	chr7	transcribed_unprocessed_pseudogene	NLR family, pyrin domain containing 5, pseudogene
chr7	14296201	14297217	-	14264938	14297217	A3SS	0.1	50	50	ENSMUST00000044683.12	ENSMUSG00000041596.13	Nlrp5-ps	chr7	transcribed_unprocessed_pseudogene	NLR family, pyrin domain containing 5, pseudogene
chr7	14296284	14297217	-	14264938	14297217	A3SS	0.1	50	50	ENSMUST00000044683.12	ENSMUSG00000041596.13	Nlrp5-ps	chr7	transcribed_unprocessed_pseudogene	NLR family, pyrin domain containing 5, pseudogene
chr7	14296327	14297217	-	14264938	14297217	A3SS	0.1	50	50	ENSMUST00000044683.12	ENSMUSG00000041596.13	Nlrp5-ps	chr7	transcribed_unprocessed_pseudogene	NLR family, pyrin domain containing 5, pseudogene
chr7	14296368	14297217	-	14264938	14297217	A3SS	0.1	50	50	ENSMUST00000044683.12	ENSMUSG00000041596.13	Nlrp5-ps	chr7	transcribed_unprocessed_pseudogene	NLR family, pyrin domain containing 5, pseudogene
chr7	14296545	14297217	-	14264938	14297217	A3SS	0.1	50	50	ENSMUST00000044683.12	ENSMUSG00000041596.13	Nlrp5-ps	chr7	transcribed_unprocessed_pseudogene	NLR family, pyrin domain containing 5, pseudogene
chr7	14296979	14297217	-	14264938	14297217	A3SS	0.1	50	50	ENSMUST00000044683.12	ENSMUSG00000041596.13	Nlrp5-ps	chr7	transcribed_unprocessed_pseudogene	NLR family, pyrin domain containing 5, pseudogene
chr7	14312753	14314859	-	14312831	14314859	A3SS	0.5	50	50	ENSMUST00000044683.12	ENSMUSG00000041596.13	Nlrp5-ps	chr7	transcribed_unprocessed_pseudogene	NLR family, pyrin domain containing 5, pseudogene
chr7	14343264	14351991	-	14343264	14356232	A5SS	0.5	50	50	ENSMUST00000044683.12	ENSMUSG00000041596.13	Nlrp5-ps	chr7	transcribed_unprocessed_pseudogene	NLR family, pyrin domain containing 5, pseudogene
chr7	14290291	14297217	-	14296545	14297217	A3SS	0.1	50	50	ENSMUST00000227855.2	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14295857	14297217	-	14296545	14297217	A3SS	0.1	50	50	ENSMUST00000227855.2	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14296084	14297217	-	14296545	14297217	A3SS	0.1	50	50	ENSMUST00000227855.2	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14296201	14297217	-	14296545	14297217	A3SS	0.1	50	50	ENSMUST00000227855.2	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14296284	14297217	-	14296545	14297217	A3SS	0.1	50	50	ENSMUST00000227855.2	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14296327	14297217	-	14296545	14297217	A3SS	0.1	50	50	ENSMUST00000227855.2	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14296368	14297217	-	14296545	14297217	A3SS	0.1	50	50	ENSMUST00000227855.2	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14296979	14297217	-	14296545	14297217	A3SS	0.1	50	50	ENSMUST00000227855.2	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14290291	14297217	-	14296327	14297217	A3SS	0.1	50	50	ENSMUST00000185220.3	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14295857	14297217	-	14296327	14297217	A3SS	0.1	50	50	ENSMUST00000185220.3	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14296084	14297217	-	14296327	14297217	A3SS	0.1	50	50	ENSMUST00000185220.3	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14296201	14297217	-	14296327	14297217	A3SS	0.1	50	50	ENSMUST00000185220.3	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14296284	14297217	-	14296327	14297217	A3SS	0.1	50	50	ENSMUST00000185220.3	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14296368	14297217	-	14296327	14297217	A3SS	0.1	50	50	ENSMUST00000185220.3	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14296979	14297217	-	14296327	14297217	A3SS	0.1	50	50	ENSMUST00000185220.3	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14290291	14297217	-	14296368	14297217	A3SS	0.1	50	50	ENSMUST00000226802.2	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14295857	14297217	-	14296368	14297217	A3SS	0.1	50	50	ENSMUST00000226802.2	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14296084	14297217	-	14296368	14297217	A3SS	0.1	50	50	ENSMUST00000226802.2	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14296201	14297217	-	14296368	14297217	A3SS	0.1	50	50	ENSMUST00000226802.2	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14296284	14297217	-	14296368	14297217	A3SS	0.1	50	50	ENSMUST00000226802.2	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14296979	14297217	-	14296368	14297217	A3SS	0.1	50	50	ENSMUST00000226802.2	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14290291	14297217	-	14296284	14297217	A3SS	0.1	50	50	ENSMUST00000227692.2	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14295857	14297217	-	14296284	14297217	A3SS	0.1	50	50	ENSMUST00000227692.2	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14296084	14297217	-	14296284	14297217	A3SS	0.1	50	50	ENSMUST00000227692.2	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14296201	14297217	-	14296284	14297217	A3SS	0.1	50	50	ENSMUST00000227692.2	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14296979	14297217	-	14296284	14297217	A3SS	0.1	50	50	ENSMUST00000227692.2	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14290291	14297217	-	14296201	14297217	A3SS	0.1	50	50	ENSMUST00000227788.2	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14295857	14297217	-	14296201	14297217	A3SS	0.1	50	50	ENSMUST00000227788.2	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14296084	14297217	-	14296201	14297217	A3SS	0.1	50	50	ENSMUST00000227788.2	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14296979	14297217	-	14296201	14297217	A3SS	0.1	50	50	ENSMUST00000227788.2	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14290291	14297217	-	14296084	14297217	A3SS	0.1	50	50	ENSMUST00000227566.2	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14295857	14297217	-	14296084	14297217	A3SS	0.1	50	50	ENSMUST00000227566.2	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14296979	14297217	-	14296084	14297217	A3SS	0.1	50	50	ENSMUST00000227566.2	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14290291	14297217	-	14295857	14297217	A3SS	0.1	50	50	ENSMUST00000226510.2	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14296979	14297217	-	14295857	14297217	A3SS	0.1	50	50	ENSMUST00000226510.2	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14296979	14297217	-	14290291	14297217	A3SS	0.1	50	50	ENSMUST00000226981.2	ENSMUSG00000100586.3	Vmn1r90	chr7	protein_coding	vomeronasal 1 receptor 90
chr7	14393705;14393893	14393835;14397917	+	14393705	14397917	cassetteExon	0.5	100	100	ENSMUST00000183788.8	ENSMUSG00000055942.14	Obox7	chr7	protein_coding	oocyte specific homeobox 7
chr7	14393772	14397917	+	14393705	14397917	A5SS	0.33	50	50	ENSMUST00000183788.8	ENSMUSG00000055942.14	Obox7	chr7	protein_coding	oocyte specific homeobox 7
chr7	14393893	14397917	+	14393772	14397917	A5SS	0.33	50	50	ENSMUST00000069740.14	ENSMUSG00000055942.14	Obox7	chr7	protein_coding	oocyte specific homeobox 7
chr7	15122931;15123120	15123062;15130725	+	15122931	15130725	cassetteExon	0.5	100	100	ENSMUST00000036575.16	ENSMUSG00000074369.13	Obox2	chr7	protein_coding	oocyte specific homeobox 2
chr7	15122998	15130725	+	15122931	15130725	A5SS	0.25	50	50	ENSMUST00000036575.16	ENSMUSG00000074369.13	Obox2	chr7	protein_coding	oocyte specific homeobox 2
chr7	15124161	15130725	+	15122931	15130725	A5SS	0.25	50	50	ENSMUST00000036575.16	ENSMUSG00000074369.13	Obox2	chr7	protein_coding	oocyte specific homeobox 2
chr7	15122998	15130725	+	15123120	15130725	A5SS&ES	0.25	50	50	ENSMUST00000174076.8	ENSMUSG00000074369.13	Obox2	chr7	protein_coding	oocyte specific homeobox 2
chr7	15124161	15130725	+	15123120	15130725	A5SS	0.25	50	50	ENSMUST00000174076.8	ENSMUSG00000074369.13	Obox2	chr7	protein_coding	oocyte specific homeobox 2
chr7	15124161	15130725	+	15122998	15130725	A5SS	0.25	50	50	ENSMUST00000174305.8	ENSMUSG00000074369.13	Obox2	chr7	protein_coding	oocyte specific homeobox 2
chr7	15122931	15123062	+	15122931	15289042	A3SS	0.33	50	50	ENSMUST00000181001.8	ENSMUSG00000054310.17	Obox1	chr7	protein_coding	oocyte specific homeobox 1
chr7	15122931	15130725	+	15122931	15289042	A3SS	0.33	50	50	ENSMUST00000181001.8	ENSMUSG00000054310.17	Obox1	chr7	protein_coding	oocyte specific homeobox 1
chr7	15246327	15289042	+	15122931	15289042	A5SS	0.16	50	50	ENSMUST00000181001.8	ENSMUSG00000054310.17	Obox1	chr7	protein_coding	oocyte specific homeobox 1
chr7	15281240	15289042	+	15122931	15289042	A5SS	0.16	50	50	ENSMUST00000181001.8	ENSMUSG00000054310.17	Obox1	chr7	protein_coding	oocyte specific homeobox 1
chr7	15281307	15289042	+	15122931	15289042	A5SS	0.16	50	50	ENSMUST00000181001.8	ENSMUSG00000054310.17	Obox1	chr7	protein_coding	oocyte specific homeobox 1
chr7	15281429	15289042	+	15122931	15289042	A5SS	0.16	50	50	ENSMUST00000181001.8	ENSMUSG00000054310.17	Obox1	chr7	protein_coding	oocyte specific homeobox 1
chr7	15282475	15289042	+	15122931	15289042	A5SS	0.16	50	50	ENSMUST00000181001.8	ENSMUSG00000054310.17	Obox1	chr7	protein_coding	oocyte specific homeobox 1
chr7	15281240	15289042	+	15246327	15289042	A5SS	0.16	50	50	ENSMUST00000172881.8	ENSMUSG00000054310.17	Obox1	chr7	protein_coding	oocyte specific homeobox 1
chr7	15281307	15289042	+	15246327	15289042	A5SS	0.16	50	50	ENSMUST00000172881.8	ENSMUSG00000054310.17	Obox1	chr7	protein_coding	oocyte specific homeobox 1
chr7	15281429	15289042	+	15246327	15289042	A5SS	0.16	50	50	ENSMUST00000172881.8	ENSMUSG00000054310.17	Obox1	chr7	protein_coding	oocyte specific homeobox 1
chr7	15282475	15289042	+	15246327	15289042	A5SS	0.16	50	50	ENSMUST00000172881.8	ENSMUSG00000054310.17	Obox1	chr7	protein_coding	oocyte specific homeobox 1
chr7	15281240;15281429	15281371;15289042	+	15281240	15289042	cassetteExon	0.5	100	100	ENSMUST00000067288.15	ENSMUSG00000054310.17	Obox1	chr7	protein_coding	oocyte specific homeobox 1
chr7	15281307	15289042	+	15281240	15289042	A5SS	0.16	50	50	ENSMUST00000067288.15	ENSMUSG00000054310.17	Obox1	chr7	protein_coding	oocyte specific homeobox 1
chr7	15282475	15289042	+	15281240	15289042	A5SS	0.16	50	50	ENSMUST00000067288.15	ENSMUSG00000054310.17	Obox1	chr7	protein_coding	oocyte specific homeobox 1
chr7	15281307	15289042	+	15281429	15289042	A5SS&ES	0.25	50	50	ENSMUST00000172463.8	ENSMUSG00000054310.17	Obox1	chr7	protein_coding	oocyte specific homeobox 1
chr7	15282475	15289042	+	15281429	15289042	A5SS	0.25	50	50	ENSMUST00000172463.8	ENSMUSG00000054310.17	Obox1	chr7	protein_coding	oocyte specific homeobox 1
chr7	15282475	15289042	+	15281307	15289042	A5SS	0.16	50	50	ENSMUST00000173443.8	ENSMUSG00000054310.17	Obox1	chr7	protein_coding	oocyte specific homeobox 1
chr7	15361308	15373655	-	15361308;15373386	15373314;15373655	ES	0.5	50	50	ENSMUST00000095217.11	ENSMUSG00000066772.13	Obox3	chr7	protein_coding	oocyte specific homeobox 3
chr7	15361308	15373588	-	15361308	15373314	A5SS&ES	0.33	50	50	ENSMUST00000095217.11	ENSMUSG00000066772.13	Obox3	chr7	protein_coding	oocyte specific homeobox 3
chr7	15361308	15373588	-	15361308	15373655	A5SS	0.33	50	50	ENSMUST00000173912.8	ENSMUSG00000066772.13	Obox3	chr7	protein_coding	oocyte specific homeobox 3
chr7	15361308	15373655	-	15361308	15373314	5pMXE	0.33	50	50	ENSMUST00000174842.2	ENSMUSG00000066772.13	Obox3	chr7	protein_coding	oocyte specific homeobox 3
chr7	15484341;15484530	15484472;15491417	+	15484341	15491417	cassetteExon	0.5	100	100	ENSMUST00000173455.8	ENSMUSG00000074366.10	Obox5	chr7	protein_coding	oocyte specific homeobox 5
chr7	15484408	15491417	+	15484341	15491417	A5SS	0.33	50	50	ENSMUST00000173455.8	ENSMUSG00000074366.10	Obox5	chr7	protein_coding	oocyte specific homeobox 5
chr7	15484530	15491417	+	15484408	15491417	A5SS	0.33	50	50	ENSMUST00000098802.10	ENSMUSG00000074366.10	Obox5	chr7	protein_coding	oocyte specific homeobox 5
chr7	15602352	15603315	-	15602352	15603268	A5SS	0.33	50	50	ENSMUST00000044434.13	ENSMUSG00000041578.16	Crx	chr7	protein_coding	cone-rod homeobox
chr7	15605201	15606199	-	15605201	15613741	A5SS	0.5	50	50	ENSMUST00000044434.13	ENSMUSG00000041578.16	Crx	chr7	protein_coding	cone-rod homeobox
chr7	15605201	15613741	-	15602352	15613741	A3SS	0.5	50	50	ENSMUST00000174358.3	ENSMUSG00000041578.16	Crx	chr7	protein_coding	cone-rod homeobox
chr7	15602352	15603268	-	15602352	15613741	A5SS	0.33	50	50	ENSMUST00000174358.3	ENSMUSG00000041578.16	Crx	chr7	protein_coding	cone-rod homeobox
chr7	15602352	15603315	-	15602352	15613741	A5SS	0.33	50	50	ENSMUST00000174358.3	ENSMUSG00000041578.16	Crx	chr7	protein_coding	cone-rod homeobox
chr7	15631477	15636775	+	15631477	15632370	3pMXE	0.5	50	50	ENSMUST00000125993.8	ENSMUSG00000074365.14	Crxos	chr7	protein_coding	cone-rod homeobox, opposite strand
chr7	15630182	15631329	+	15624574	15631329	A5SS	0.33	50	50	ENSMUST00000125993.8	ENSMUSG00000074365.14	Crxos	chr7	protein_coding	cone-rod homeobox, opposite strand
chr7	15616709	15617444	+	15616709	15631329	A3SS	0.5	50	50	ENSMUST00000130566.2	ENSMUSG00000074365.14	Crxos	chr7	protein_coding	cone-rod homeobox, opposite strand
chr7	15624574	15631329	+	15616709	15631329	A5SS	0.33	50	50	ENSMUST00000130566.2	ENSMUSG00000074365.14	Crxos	chr7	protein_coding	cone-rod homeobox, opposite strand
chr7	15630182	15631329	+	15616709	15631329	A5SS	0.33	50	50	ENSMUST00000130566.2	ENSMUSG00000074365.14	Crxos	chr7	protein_coding	cone-rod homeobox, opposite strand
chr7	15631477	15636775	+	15631477;15632541	15632370;15636775	ES	0.33	50	50	ENSMUST00000098801.9	ENSMUSG00000074365.14	Crxos	chr7	protein_coding	cone-rod homeobox, opposite strand
chr7	15635662	15636775	+	15632541	15636775	A5SS	0.33	50	50	ENSMUST00000098801.9	ENSMUSG00000074365.14	Crxos	chr7	protein_coding	cone-rod homeobox, opposite strand
chr7	15635662	15636775	+	15631477	15636775	A5SS	0.33	50	50	ENSMUST00000173808.2	ENSMUSG00000074365.14	Crxos	chr7	protein_coding	cone-rod homeobox, opposite strand
chr7	15676822;15678012	15677910;15679215	-	15676822	15679215	cassetteExon	0.5	100	100	ENSMUST00000044158.13	ENSMUSG00000041560.13	Nop53	chr7	protein_coding	NOP53 ribosome biogenesis factor
chr7	15679279	15679443	-	15679279	15679755	A5SS	0.33	50	50	ENSMUST00000044158.13	ENSMUSG00000041560.13	Nop53	chr7	protein_coding	NOP53 ribosome biogenesis factor
chr7	15679279	15679548	-	15679279	15679755	A5SS	0.33	50	50	ENSMUST00000044158.13	ENSMUSG00000041560.13	Nop53	chr7	protein_coding	NOP53 ribosome biogenesis factor
chr7	15679279	15679548	-	15679279	15679443	A5SS	0.33	50	50	ENSMUST00000197477.5	ENSMUSG00000041560.13	Nop53	chr7	protein_coding	NOP53 ribosome biogenesis factor
chr7	15697402	15701345	-	15697402;15698291	15697832;15701345	ES	0.5	50	50	ENSMUST00000098799.5	ENSMUSG00000074364.7	Ehd2	chr7	protein_coding	EH-domain containing 2
chr7	15709110	15709590	-	15709110;15709385	15709291;15709590	ES	0.5	50	50	ENSMUST00000210713.2	ENSMUSG00000070808.5	Bicra	chr7	protein_coding	BRD4 interacting chromatin remodeling complex associated protein
chr7	15832699	15842976	+	15832699;15841557	15841478;15842976	ES	0.5	50	50	ENSMUST00000006181.7	ENSMUSG00000006024.14	Napa	chr7	protein_coding	N-ethylmaleimide sensitive fusion protein attachment protein alpha
chr7	15843092	15847275	+	15843092	15846509	3pMXE	0.5	50	50	ENSMUST00000124563.8	ENSMUSG00000006024.14	Napa	chr7	protein_coding	N-ethylmaleimide sensitive fusion protein attachment protein alpha
chr7	15832699	15842976	+	15841557	15842976	5pMXE	0.5	50	50	ENSMUST00000139507.3	ENSMUSG00000006024.14	Napa	chr7	protein_coding	N-ethylmaleimide sensitive fusion protein attachment protein alpha
chr7	15847114	15847275	+	15843092	15847275	A5SS	0.5	50	50	ENSMUST00000139507.3	ENSMUSG00000006024.14	Napa	chr7	protein_coding	N-ethylmaleimide sensitive fusion protein attachment protein alpha
chr7	15857194	15857697	+	15857198	15857697	A5SS	0.5	50	50	ENSMUST00000006178.5	ENSMUSG00000006021.6	Kptn	chr7	protein_coding	kaptin
chr7	15884369	15886744	+	15884369;15884516	15884499;15886744	ES	0.5	50	50	ENSMUST00000211649.2	ENSMUSG00000030376.9	Slc8a2	chr7	protein_coding	solute carrier family 8 (sodium/calcium exchanger), member 2
chr7	15911793;15911936	15911886;15912670	+	15911793	15912670	cassetteExon	0.5	100	100	ENSMUST00000176342.8	ENSMUSG00000041420.19	Meis3	chr7	protein_coding	Meis homeobox 3
chr7	15912720	15912876	+	15912720	15912927	A3SS	0.5	50	50	ENSMUST00000176506.8	ENSMUSG00000041420.19	Meis3	chr7	protein_coding	Meis homeobox 3
chr7	15916077	15916213	+	15916077	15916245	A3SS	0.5	50	50	ENSMUST00000176506.8	ENSMUSG00000041420.19	Meis3	chr7	protein_coding	Meis homeobox 3
chr7	15917781	15917963	+	15917792	15917963	A5SS	0.5	50	50	ENSMUST00000176506.8	ENSMUSG00000041420.19	Meis3	chr7	protein_coding	Meis homeobox 3
chr7	15919442	15919982	+	15919446	15919982	A5SS	0.5	50	50	ENSMUST00000176506.8	ENSMUSG00000041420.19	Meis3	chr7	protein_coding	Meis homeobox 3
chr7	15911793	15912670	+	15911793	15911886	3pMXE	0.5	50	50	ENSMUST00000183527.2	ENSMUSG00000041420.19	Meis3	chr7	protein_coding	Meis homeobox 3
chr7	15946951	15947045	-	15946951	15948267	A5SS	0.5	50	50	ENSMUST00000121123.8	ENSMUSG00000006019.16	Dhx34	chr7	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 34
chr7	15952875	15955609	-	15952875	15955923	A5SS	0.5	50	50	ENSMUST00000121123.8	ENSMUSG00000006019.16	Dhx34	chr7	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 34
chr7	15953109	15955609	-	15952875	15955609	A3SS	0.5	50	50	ENSMUST00000118795.8	ENSMUSG00000006019.16	Dhx34	chr7	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 34
chr7	15971899	15977948	-	15971899	15976218	5pMXE	0.5	50	50	ENSMUST00000238927.2	ENSMUSG00000074361.12	C5ar2	chr7	protein_coding	complement component 5a receptor 2
chr7	16008341	16009181	-	16008341	16009205	A5SS	0.5	50	50	ENSMUST00000172670.2	ENSMUSG00000041375.19	Ccdc9	chr7	protein_coding	coiled-coil domain containing 9
chr7	16010035	16010127	-	16010032	16010127	A3SS	0.5	50	50	ENSMUST00000118976.9	ENSMUSG00000041375.19	Ccdc9	chr7	protein_coding	coiled-coil domain containing 9
chr7	16018287	16018420	-	16018300	16018420	A3SS	0.33	50	50	ENSMUST00000118976.9	ENSMUSG00000041375.19	Ccdc9	chr7	protein_coding	coiled-coil domain containing 9
chr7	16018338	16018420	-	16018300	16018420	A3SS	0.33	50	50	ENSMUST00000118976.9	ENSMUSG00000041375.19	Ccdc9	chr7	protein_coding	coiled-coil domain containing 9
chr7	16014866	16015638	-	16014866	16016282	A5SS	0.5	50	50	ENSMUST00000118976.9	ENSMUSG00000041375.19	Ccdc9	chr7	protein_coding	coiled-coil domain containing 9
chr7	16016775	16018150	-	16016775	16018196	A5SS	0.5	50	50	ENSMUST00000118976.9	ENSMUSG00000041375.19	Ccdc9	chr7	protein_coding	coiled-coil domain containing 9
chr7	16018471	16018564	-	16018471	16020625	A5SS	0.33	50	50	ENSMUST00000118976.9	ENSMUSG00000041375.19	Ccdc9	chr7	protein_coding	coiled-coil domain containing 9
chr7	16018471	16019852	-	16018471	16020625	A5SS	0.33	50	50	ENSMUST00000118976.9	ENSMUSG00000041375.19	Ccdc9	chr7	protein_coding	coiled-coil domain containing 9
chr7	16018338	16018420	-	16018287	16018420	A3SS	0.33	50	50	ENSMUST00000150528.9	ENSMUSG00000041375.19	Ccdc9	chr7	protein_coding	coiled-coil domain containing 9
chr7	16018471	16018564	-	16018471	16019852	A5SS	0.33	50	50	ENSMUST00000145519.3	ENSMUSG00000041375.19	Ccdc9	chr7	protein_coding	coiled-coil domain containing 9
chr7	16043786	16046051	+	16042433	16046051	A5SS	0.33	50	50	ENSMUST00000209688.2	ENSMUSG00000002083.14	Bbc3	chr7	protein_coding	BCL2 binding component 3
chr7	16044463	16046051	+	16042433	16046051	A5SS	0.33	50	50	ENSMUST00000209688.2	ENSMUSG00000002083.14	Bbc3	chr7	protein_coding	BCL2 binding component 3
chr7	16044463	16046051	+	16043786	16046051	A5SS	0.33	50	50	ENSMUST00000002152.13	ENSMUSG00000002083.14	Bbc3	chr7	protein_coding	BCL2 binding component 3
chr7	16054805;16061854	16061756;16064538	-	16054805	16064538	cassetteExon	0.5	100	100	ENSMUST00000211741.2	ENSMUSG00000052833.10	Sae1	chr7	protein_coding	SUMO1 activating enzyme subunit 1
chr7	16068246	16070619	-	16064607	16070619	A3SS	0.5	50	50	ENSMUST00000211741.2	ENSMUSG00000052833.10	Sae1	chr7	protein_coding	SUMO1 activating enzyme subunit 1
chr7	16054805	16064538	-	16061854	16064538	3pMXE	0.5	50	50	ENSMUST00000094815.5	ENSMUSG00000052833.10	Sae1	chr7	protein_coding	SUMO1 activating enzyme subunit 1
chr7	16135231	16150698	+	16134966	16150698	A5SS	0.33	50	50	ENSMUST00000214735.2	ENSMUSG00000059273.10	Zc3h4	chr7	protein_coding	zinc finger CCCH-type containing 4
chr7	16136441	16150698	+	16134966	16150698	A5SS	0.33	50	50	ENSMUST00000214735.2	ENSMUSG00000059273.10	Zc3h4	chr7	protein_coding	zinc finger CCCH-type containing 4
chr7	16163835	16167946	+	16163835;16166947	16166699;16167946	ES	0.5	50	50	ENSMUST00000098789.5	ENSMUSG00000059273.10	Zc3h4	chr7	protein_coding	zinc finger CCCH-type containing 4
chr7	16135231;16136441	16136380;16150698	+	16135231	16150698	cassetteExon	0.5	100	100	ENSMUST00000098789.5	ENSMUSG00000059273.10	Zc3h4	chr7	protein_coding	zinc finger CCCH-type containing 4
chr7	16187095	16187982	+	16187095	16188046	A3SS	0.5	50	50	ENSMUST00000019302.10	ENSMUSG00000019158.10	Tmem160	chr7	protein_coding	transmembrane protein 160
chr7	16199201	16199286	-	16199121	16199286	A3SS	0.5	50	50	ENSMUST00000210748.2	ENSMUSG00000001988.10	Npas1	chr7	protein_coding	neuronal PAS domain protein 1
chr7	16195361	16195716	-	16195361	16195706	A5SS	0.5	50	50	ENSMUST00000210748.2	ENSMUSG00000001988.10	Npas1	chr7	protein_coding	neuronal PAS domain protein 1
chr7	16209609	16211571	-	16209609	16210570	5pMXE	0.5	50	50	ENSMUST00000002053.9	ENSMUSG00000001988.10	Npas1	chr7	protein_coding	neuronal PAS domain protein 1
chr7	16347991	16356970	+	16347877	16356970	A5SS	0.5	50	50	ENSMUST00000190297.7	ENSMUSG00000100583.7	Gm29443	chr7	lncRNA	predicted gene 29443
chr7	16455955	16457535	+	16455955	16457550	A3SS	0.5	50	50	ENSMUST00000001984.5	ENSMUSG00000007209.5	Ceacam9	chr7	protein_coding	carcinoembryonic antigen-related cell adhesion molecule 9
chr7	16472463	16481186	+	16472463;16477293	16477144;16481186	ES	0.33	50	50	ENSMUST00000086112.8	ENSMUSG00000008036.12	Ap2s1	chr7	protein_coding	adaptor-related protein complex 2, sigma 1 subunit
chr7	16477293;16477605	16477516;16481186	+	16477293	16481186	cassetteExon	0.5	100	100	ENSMUST00000086112.8	ENSMUSG00000008036.12	Ap2s1	chr7	protein_coding	adaptor-related protein complex 2, sigma 1 subunit
chr7	16472512	16477144	+	16472463	16477144	A5SS	0.5	50	50	ENSMUST00000086112.8	ENSMUSG00000008036.12	Ap2s1	chr7	protein_coding	adaptor-related protein complex 2, sigma 1 subunit
chr7	16472463;16477605	16477144;16481186	+	16472463	16481186	cassetteExon	0.5	100	100	ENSMUST00000205607.2	ENSMUSG00000008036.12	Ap2s1	chr7	protein_coding	adaptor-related protein complex 2, sigma 1 subunit
chr7	16518727	16519601	+	16516400	16519601	A5SS	0.5	50	50	ENSMUST00000108496.9	ENSMUSG00000001918.18	Slc1a5	chr7	protein_coding	solute carrier family 1 (neutral amino acid transporter), member 5
chr7	16526999	16527572	+	16523862	16527572	A5SS	0.5	50	50	ENSMUST00000108496.9	ENSMUSG00000001918.18	Slc1a5	chr7	protein_coding	solute carrier family 1 (neutral amino acid transporter), member 5
chr7	16558142;16559775	16559715;16560389	+	16558142	16560389	cassetteExon	0.5	100	100	ENSMUST00000019220.16	ENSMUSG00000030374.16	Strn4	chr7	protein_coding	striatin, calmodulin binding protein 4
chr7	16565063	16565271	+	16565063	16565390	A3SS	0.33	50	50	ENSMUST00000019220.16	ENSMUSG00000030374.16	Strn4	chr7	protein_coding	striatin, calmodulin binding protein 4
chr7	16565063	16565411	+	16565063	16565390	A3SS	0.33	50	50	ENSMUST00000019220.16	ENSMUSG00000030374.16	Strn4	chr7	protein_coding	striatin, calmodulin binding protein 4
chr7	16565505	16566867	+	16565505	16566851	A3SS	0.5	50	50	ENSMUST00000019220.16	ENSMUSG00000030374.16	Strn4	chr7	protein_coding	striatin, calmodulin binding protein 4
chr7	16556152	16556421	+	16550559	16556421	A5SS	0.5	50	50	ENSMUST00000019220.16	ENSMUSG00000030374.16	Strn4	chr7	protein_coding	striatin, calmodulin binding protein 4
chr7	16564128	16564251	+	16562741	16564251	A5SS	0.5	50	50	ENSMUST00000019220.16	ENSMUSG00000030374.16	Strn4	chr7	protein_coding	striatin, calmodulin binding protein 4
chr7	16565063	16565271	+	16565063	16565411	A3SS	0.33	50	50	ENSMUST00000108495.9	ENSMUSG00000030374.16	Strn4	chr7	protein_coding	striatin, calmodulin binding protein 4
chr7	16578169	16579744	+	16577788	16579744	A5SS	0.33	50	50	ENSMUST00000168093.9	ENSMUSG00000041187.17	Prkd2	chr7	protein_coding	protein kinase D2
chr7	16579346	16579744	+	16577788	16579744	A5SS	0.33	50	50	ENSMUST00000168093.9	ENSMUSG00000041187.17	Prkd2	chr7	protein_coding	protein kinase D2
chr7	16579346	16579744	+	16578169	16579744	A5SS	0.33	50	50	ENSMUST00000205841.2	ENSMUSG00000041187.17	Prkd2	chr7	protein_coding	protein kinase D2
chr7	16626281	16628867	+	16626281;16626436	16626375;16628867	ES	0.33	50	50	ENSMUST00000078182.6	ENSMUSG00000063594.6	Gng8	chr7	protein_coding	guanine nucleotide binding protein (G protein), gamma 8
chr7	16626436;16627144	16627046;16628867	+	16626436	16628867	cassetteExon	0.5	100	100	ENSMUST00000078182.6	ENSMUSG00000063594.6	Gng8	chr7	protein_coding	guanine nucleotide binding protein (G protein), gamma 8
chr7	16627144	16628867	+	16626281	16628867	A5SS	0.33	50	50	ENSMUST00000205716.2	ENSMUSG00000063594.6	Gng8	chr7	protein_coding	guanine nucleotide binding protein (G protein), gamma 8
chr7	16627144	16628623	+	16627144	16628867	A3SS	0.5	50	50	ENSMUST00000205459.2	ENSMUSG00000063594.6	Gng8	chr7	protein_coding	guanine nucleotide binding protein (G protein), gamma 8
chr7	16626281	16628867	+	16626281	16626375	A3SS&ES	0.5	50	50	ENSMUST00000205598.2	ENSMUSG00000063594.6	Gng8	chr7	protein_coding	guanine nucleotide binding protein (G protein), gamma 8
chr7	16626436	16628867	+	16626436	16627046	A3SS&ES	0.5	50	50	ENSMUST00000205598.2	ENSMUSG00000063594.6	Gng8	chr7	protein_coding	guanine nucleotide binding protein (G protein), gamma 8
chr7	16653590	16657622	-	16653590	16657766	A5SS	0.5	50	50	ENSMUST00000019514.10	ENSMUSG00000019370.11	Calm3	chr7	protein_coding	calmodulin 3
chr7	16742637	16743800	-	16742637;16742983	16742918;16743800	ES	0.5	50	50	ENSMUST00000003183.12	ENSMUSG00000003099.12	Ppp5c	chr7	protein_coding	protein phosphatase 5, catalytic subunit
chr7	16749470	16761618	-	16749470;16756581	16756340;16761618	ES	0.5	50	50	ENSMUST00000003183.12	ENSMUSG00000003099.12	Ppp5c	chr7	protein_coding	protein phosphatase 5, catalytic subunit
chr7	16742633	16742918	-	16742637	16742918	A3SS	0.5	50	50	ENSMUST00000003183.12	ENSMUSG00000003099.12	Ppp5c	chr7	protein_coding	protein phosphatase 5, catalytic subunit
chr7	16756581	16758512	-	16756581	16761618	A5SS	0.33	50	50	ENSMUST00000003183.12	ENSMUSG00000003099.12	Ppp5c	chr7	protein_coding	protein phosphatase 5, catalytic subunit
chr7	16756581	16761353	-	16756581	16761618	A5SS	0.33	50	50	ENSMUST00000003183.12	ENSMUSG00000003099.12	Ppp5c	chr7	protein_coding	protein phosphatase 5, catalytic subunit
chr7	16742637	16743800	-	16742983	16743800	A3SS	0.5	50	50	ENSMUST00000124573.8	ENSMUSG00000003099.12	Ppp5c	chr7	protein_coding	protein phosphatase 5, catalytic subunit
chr7	16756581	16761353	-	16756581	16758512	5pMXE	0.33	50	50	ENSMUST00000127311.8	ENSMUSG00000003099.12	Ppp5c	chr7	protein_coding	protein phosphatase 5, catalytic subunit
chr7	16749470	16761618	-	16756581	16761618	3pMXE	0.5	50	50	ENSMUST00000145997.2	ENSMUSG00000003099.12	Ppp5c	chr7	protein_coding	protein phosphatase 5, catalytic subunit
chr7	16785931;16787738	16787683;16788607	-	16785931	16788607	cassetteExon	0.5	100	100	ENSMUST00000108492.9	ENSMUSG00000004328.16	Hif3a	chr7	protein_coding	hypoxia inducible factor 3, alpha subunit
chr7	16788738	16790185	-	16788752	16790185	A3SS	0.5	50	50	ENSMUST00000108492.9	ENSMUSG00000004328.16	Hif3a	chr7	protein_coding	hypoxia inducible factor 3, alpha subunit
chr7	16790375	16790502	-	16790375	16796281	A5SS	0.5	50	50	ENSMUST00000108492.9	ENSMUSG00000004328.16	Hif3a	chr7	protein_coding	hypoxia inducible factor 3, alpha subunit
chr7	16808221	16828935	+	16827835	16828935	A5SS&ES	0.5	50	50	ENSMUST00000071399.13	ENSMUSG00000066760.13	Psg16	chr7	protein_coding	pregnancy specific glycoprotein 16
chr7	16822126	16824300	+	16808225	16824300	A5SS	0.5	50	50	ENSMUST00000071399.13	ENSMUSG00000066760.13	Psg16	chr7	protein_coding	pregnancy specific glycoprotein 16
chr7	17048469	17050881	-	17040889	17050881	A3SS	0.5	50	50	ENSMUST00000207022.2	ENSMUSG00000108782.2	Gm32772	chr7	lncRNA	predicted gene, 32772
chr7	17093202	17097324	-	17051637	17097324	A3SS	0.5	50	50	ENSMUST00000207022.2	ENSMUSG00000108782.2	Gm32772	chr7	lncRNA	predicted gene, 32772
chr7	17051637	17089395	-	17051637	17097324	A5SS	0.5	50	50	ENSMUST00000207022.2	ENSMUSG00000108782.2	Gm32772	chr7	lncRNA	predicted gene, 32772
chr7	17097375	17097623	-	17097375	17105323	A5SS	0.5	50	50	ENSMUST00000207022.2	ENSMUSG00000108782.2	Gm32772	chr7	lncRNA	predicted gene, 32772
chr7	17803376	17811320	+	17803376	17805596	3pMXE	0.5	50	50	ENSMUST00000032520.9	ENSMUSG00000030366.11	Ceacam12	chr7	protein_coding	carcinoembryonic antigen-related cell adhesion molecule 12
chr7	17836395;17841415	17841228;17920785	-	17836395;17839079	17839063;17920785	MXE	0.5	100	100	ENSMUST00000205637.2	ENSMUSG00000108545.2	Gm44613	chr7	lncRNA	predicted gene 44613
chr7	18080052	18080376	-	18080052	18083223	A5SS	0.33	50	50	ENSMUST00000182983.2	ENSMUSG00000003505.16	Psg18	chr7	protein_coding	pregnancy specific glycoprotein 18
chr7	18080052	18083007	-	18080052	18083223	A5SS	0.33	50	50	ENSMUST00000182983.2	ENSMUSG00000003505.16	Psg18	chr7	protein_coding	pregnancy specific glycoprotein 18
chr7	18080052	18083007	-	18080052	18080376	5pMXE	0.33	50	50	ENSMUST00000183222.2	ENSMUSG00000003505.16	Psg18	chr7	protein_coding	pregnancy specific glycoprotein 18
chr7	18085030	18088679	-	18085030;18087592	18087230;18088679	ES	0.5	50	50	ENSMUST00000003597.15	ENSMUSG00000003505.16	Psg18	chr7	protein_coding	pregnancy specific glycoprotein 18
chr7	18389026;18390036	18389989;18390391	-	18389026	18390391	cassetteExon	0.5	100	100	ENSMUST00000094793.12	ENSMUSG00000070796.12	Psg21	chr7	protein_coding	pregnancy-specific glycoprotein 21
chr7	18415100	18416317	-	18415100	18416331	A5SS	0.5	50	50	ENSMUST00000108482.8	ENSMUSG00000063305.11	Psg20	chr7	protein_coding	pregnancy-specific glycoprotein 20
chr7	18526704	18530729	-	18526704;18528317	18527958;18530729	ES	0.5	50	50	ENSMUST00000004657.14	ENSMUSG00000004542.16	Psg19	chr7	protein_coding	pregnancy specific glycoprotein 19
chr7	18528317	18530953	-	18528317	18530729	A5SS	0.5	50	50	ENSMUST00000004657.14	ENSMUSG00000004542.16	Psg19	chr7	protein_coding	pregnancy specific glycoprotein 19
chr7	18574016;18575439	18575395;18589865	+	18574016	18589865	cassetteExon	0.5	100	100	ENSMUST00000072415.9	ENSMUSG00000040987.16	Mill2	chr7	protein_coding	MHC I like leukocyte 2
chr7	18590128	18590237	+	18590128	18590331	A3SS	0.5	50	50	ENSMUST00000072415.9	ENSMUSG00000040987.16	Mill2	chr7	protein_coding	MHC I like leukocyte 2
chr7	18580055	18589865	+	18574016	18589865	A5SS	0.25	50	50	ENSMUST00000072415.9	ENSMUSG00000040987.16	Mill2	chr7	protein_coding	MHC I like leukocyte 2
chr7	18581362	18589865	+	18574016	18589865	A5SS	0.25	50	50	ENSMUST00000072415.9	ENSMUSG00000040987.16	Mill2	chr7	protein_coding	MHC I like leukocyte 2
chr7	18575439;18580055	18579987;18589865	+	18575439	18589865	cassetteExon	0.5	100	100	ENSMUST00000072386.11	ENSMUSG00000040987.16	Mill2	chr7	protein_coding	MHC I like leukocyte 2
chr7	18575439;18581362	18581165;18589865	+	18575439	18589865	cassetteExon	0.5	100	100	ENSMUST00000072386.11	ENSMUSG00000040987.16	Mill2	chr7	protein_coding	MHC I like leukocyte 2
chr7	18592578	18596264	+	18592578	18596611	A3SS	0.5	50	50	ENSMUST00000228493.2	ENSMUSG00000040987.16	Mill2	chr7	protein_coding	MHC I like leukocyte 2
chr7	18575439;18580055	18579987;18589865	+	18575439;18581362	18581165;18589865	MXE	0.5	100	100	ENSMUST00000206487.3	ENSMUSG00000040987.16	Mill2	chr7	protein_coding	MHC I like leukocyte 2
chr7	18606935	18623203	+	18607918	18623203	A5SS&ES	0.33	50	50	ENSMUST00000206206.2	ENSMUSG00000030413.8	Pglyrp1	chr7	protein_coding	peptidoglycan recognition protein 1
chr7	18618898	18623203	+	18607918	18623203	A5SS	0.33	50	50	ENSMUST00000206206.2	ENSMUSG00000030413.8	Pglyrp1	chr7	protein_coding	peptidoglycan recognition protein 1
chr7	18618898	18623203	+	18606935	18623203	A5SS	0.33	50	50	ENSMUST00000206569.2	ENSMUSG00000030413.8	Pglyrp1	chr7	protein_coding	peptidoglycan recognition protein 1
chr7	18626124	18626199	-	18626024	18626199	A3SS	0.5	50	50	ENSMUST00000098780.10	ENSMUSG00000074358.10	Ccdc61	chr7	protein_coding	coiled-coil domain containing 61
chr7	18633607	18634844	-	18633638	18634844	A3SS	0.5	50	50	ENSMUST00000098780.10	ENSMUSG00000074358.10	Ccdc61	chr7	protein_coding	coiled-coil domain containing 61
chr7	18627273	18627704	-	18627273	18627692	A5SS	0.5	50	50	ENSMUST00000098780.10	ENSMUSG00000074358.10	Ccdc61	chr7	protein_coding	coiled-coil domain containing 61
chr7	18637864	18644268	-	18637864	18644058	A5SS	0.33	50	50	ENSMUST00000098780.10	ENSMUSG00000074358.10	Ccdc61	chr7	protein_coding	coiled-coil domain containing 61
chr7	18637864	18644279	-	18637864	18644058	A5SS	0.33	50	50	ENSMUST00000098780.10	ENSMUSG00000074358.10	Ccdc61	chr7	protein_coding	coiled-coil domain containing 61
chr7	18637864	18644279	-	18637864	18644268	A5SS	0.33	50	50	ENSMUST00000150065.8	ENSMUSG00000074358.10	Ccdc61	chr7	protein_coding	coiled-coil domain containing 61
chr7	18725279	18725907	+	18725279	18725757	A3SS	0.5	50	50	ENSMUST00000059331.9	ENSMUSG00000048481.16	Mypop	chr7	protein_coding	Myb-related transcription factor, partner of profilin
chr7	18727677	18731315	-	18727266	18731315	A3SS	0.5	50	50	ENSMUST00000206304.2	ENSMUSG00000086533.3	Mypopos	chr7	lncRNA	Myb-related transcription factor, partner of profilin, opposite strand
chr7	18758431;18761947	18761822;18762789	+	18758431	18762789	cassetteExon	0.5	100	100	ENSMUST00000023882.14	ENSMUSG00000023118.16	Sympk	chr7	protein_coding	symplekin
chr7	18770000;18770162	18770089;18770587	+	18770000	18770587	cassetteExon	0.5	100	100	ENSMUST00000023882.14	ENSMUSG00000023118.16	Sympk	chr7	protein_coding	symplekin
chr7	18780827	18781446	+	18780827	18781375	A3SS	0.5	50	50	ENSMUST00000023882.14	ENSMUSG00000023118.16	Sympk	chr7	protein_coding	symplekin
chr7	18787371	18788403	+	18787371	18787472	A3SS&ES	0.5	50	50	ENSMUST00000023882.14	ENSMUSG00000023118.16	Sympk	chr7	protein_coding	symplekin
chr7	18791693	18801014	+	18791693;18799996	18799232;18801014	ES	0.5	50	50	ENSMUST00000035521.11	ENSMUSG00000040866.14	Rsph6a	chr7	protein_coding	radial spoke head 6 homolog A (Chlamydomonas)
chr7	18791693	18799232	+	18791693	18801014	A3SS	0.5	50	50	ENSMUST00000076887.6	ENSMUSG00000040866.14	Rsph6a	chr7	protein_coding	radial spoke head 6 homolog A (Chlamydomonas)
chr7	18799996	18801014	+	18791693	18801014	A5SS	0.5	50	50	ENSMUST00000076887.6	ENSMUSG00000040866.14	Rsph6a	chr7	protein_coding	radial spoke head 6 homolog A (Chlamydomonas)
chr7	18815226	18816201	+	18815226;18815918	18815844;18816201	ES	0.33	50	50	ENSMUST00000032570.14	ENSMUSG00000030410.17	Dmwd	chr7	protein_coding	dystrophia myotonica-containing WD repeat motif
chr7	18812162	18816201	+	18812162;18815226	18813967;18816201	ES	0.33	50	50	ENSMUST00000108479.2	ENSMUSG00000030410.17	Dmwd	chr7	protein_coding	dystrophia myotonica-containing WD repeat motif
chr7	18812162	18813967	+	18812162	18816201	A3SS	0.5	50	50	ENSMUST00000138997.2	ENSMUSG00000030410.17	Dmwd	chr7	protein_coding	dystrophia myotonica-containing WD repeat motif
chr7	18815226	18816201	+	18812162	18816201	A5SS	0.33	50	50	ENSMUST00000138997.2	ENSMUSG00000030410.17	Dmwd	chr7	protein_coding	dystrophia myotonica-containing WD repeat motif
chr7	18815918	18816201	+	18812162	18816201	A5SS	0.33	50	50	ENSMUST00000138997.2	ENSMUSG00000030410.17	Dmwd	chr7	protein_coding	dystrophia myotonica-containing WD repeat motif
chr7	18820002	18820414	+	18820002;18820340	18820257;18820414	ES	0.5	50	50	ENSMUST00000032568.14	ENSMUSG00000030409.17	Dmpk	chr7	protein_coding	dystrophia myotonica-protein kinase
chr7	18822921	18825606	+	18822921;18824965	18824854;18825606	ES	0.5	50	50	ENSMUST00000032568.14	ENSMUSG00000030409.17	Dmpk	chr7	protein_coding	dystrophia myotonica-protein kinase
chr7	18822189	18822464	+	18822189	18822836	A3SS	0.5	50	50	ENSMUST00000032568.14	ENSMUSG00000030409.17	Dmpk	chr7	protein_coding	dystrophia myotonica-protein kinase
chr7	18824965	18825580	+	18824965	18825606	A3SS	0.5	50	50	ENSMUST00000032568.14	ENSMUSG00000030409.17	Dmpk	chr7	protein_coding	dystrophia myotonica-protein kinase
chr7	18826179	18826343	+	18826179	18826468	A3SS	0.33	50	50	ENSMUST00000032568.14	ENSMUSG00000030409.17	Dmpk	chr7	protein_coding	dystrophia myotonica-protein kinase
chr7	18826179	18826472	+	18826179	18826468	A3SS	0.33	50	50	ENSMUST00000032568.14	ENSMUSG00000030409.17	Dmpk	chr7	protein_coding	dystrophia myotonica-protein kinase
chr7	18818834	18819911	+	18818079	18819911	A5SS	0.5	50	50	ENSMUST00000032568.14	ENSMUSG00000030409.17	Dmpk	chr7	protein_coding	dystrophia myotonica-protein kinase
chr7	18822174	18822836	+	18822189	18822836	A5SS	0.5	50	50	ENSMUST00000032568.14	ENSMUSG00000030409.17	Dmpk	chr7	protein_coding	dystrophia myotonica-protein kinase
chr7	18826179	18826472	+	18826179	18826343	A3SS	0.33	50	50	ENSMUST00000154199.8	ENSMUSG00000030409.17	Dmpk	chr7	protein_coding	dystrophia myotonica-protein kinase
chr7	18825961;18826557	18826133;18826875	+	18825961	18826875	cassetteExon	0.5	100	100	ENSMUST00000108473.10	ENSMUSG00000030409.17	Dmpk	chr7	protein_coding	dystrophia myotonica-protein kinase
chr7	18822025	18822113	+	18822034	18822113	A5SS	0.5	50	50	ENSMUST00000108474.2	ENSMUSG00000030409.17	Dmpk	chr7	protein_coding	dystrophia myotonica-protein kinase
chr7	18825961	18826875	+	18826557	18826875	A5SS&ES	0.5	50	50	ENSMUST00000137219.8	ENSMUSG00000030409.17	Dmpk	chr7	protein_coding	dystrophia myotonica-protein kinase
chr7	18822921	18825606	+	18822921	18824854	A3SS&ES	0.5	50	50	ENSMUST00000128422.8	ENSMUSG00000030409.17	Dmpk	chr7	protein_coding	dystrophia myotonica-protein kinase
chr7	18839771	18845607	-	18839771;18840970	18840859;18845607	ES	0.5	50	50	ENSMUST00000141380.3	ENSMUSG00000085601.8	Meiosin	chr7	protein_coding	meiosis initiator
chr7	18865680	18869303	+	18853861	18869303	A5SS	0.5	50	50	ENSMUST00000053109.5	ENSMUSG00000050428.8	Fbxo46	chr7	protein_coding	F-box protein 46
chr7	18898585	18898893	-	18898547	18898893	A3SS	0.5	50	50	ENSMUST00000094790.5	ENSMUSG00000030406.8	Gipr	chr7	protein_coding	gastric inhibitory polypeptide receptor
chr7	18934556	18935490	+	18934556;18935116	18935049;18935490	ES	0.5	50	50	ENSMUST00000117338.8	ENSMUSG00000040811.16	Eml2	chr7	protein_coding	echinoderm microtubule associated protein like 2
chr7	18935578	18936434	+	18935578;18935852	18935755;18936434	ES	0.5	50	50	ENSMUST00000117338.8	ENSMUSG00000040811.16	Eml2	chr7	protein_coding	echinoderm microtubule associated protein like 2
chr7	18915148	18915634	+	18913780	18915634	A5SS	0.2	50	50	ENSMUST00000117338.8	ENSMUSG00000040811.16	Eml2	chr7	protein_coding	echinoderm microtubule associated protein like 2
chr7	18915210	18915634	+	18913780	18915634	A5SS	0.2	50	50	ENSMUST00000117338.8	ENSMUSG00000040811.16	Eml2	chr7	protein_coding	echinoderm microtubule associated protein like 2
chr7	18915280	18915634	+	18913780	18915634	A5SS	0.2	50	50	ENSMUST00000117338.8	ENSMUSG00000040811.16	Eml2	chr7	protein_coding	echinoderm microtubule associated protein like 2
chr7	18915473	18915634	+	18913780	18915634	A5SS	0.2	50	50	ENSMUST00000117338.8	ENSMUSG00000040811.16	Eml2	chr7	protein_coding	echinoderm microtubule associated protein like 2
chr7	18915210	18915634	+	18915148	18915634	A5SS	0.2	50	50	ENSMUST00000120595.8	ENSMUSG00000040811.16	Eml2	chr7	protein_coding	echinoderm microtubule associated protein like 2
chr7	18915280	18915634	+	18915148	18915634	A5SS	0.2	50	50	ENSMUST00000120595.8	ENSMUSG00000040811.16	Eml2	chr7	protein_coding	echinoderm microtubule associated protein like 2
chr7	18915473	18915634	+	18915148	18915634	A5SS	0.2	50	50	ENSMUST00000120595.8	ENSMUSG00000040811.16	Eml2	chr7	protein_coding	echinoderm microtubule associated protein like 2
chr7	18915280	18915634	+	18915210	18915634	A5SS	0.2	50	50	ENSMUST00000144054.8	ENSMUSG00000040811.16	Eml2	chr7	protein_coding	echinoderm microtubule associated protein like 2
chr7	18915473	18915634	+	18915210	18915634	A5SS	0.2	50	50	ENSMUST00000144054.8	ENSMUSG00000040811.16	Eml2	chr7	protein_coding	echinoderm microtubule associated protein like 2
chr7	18915473	18915634	+	18915280	18915634	A5SS	0.2	50	50	ENSMUST00000141718.8	ENSMUSG00000040811.16	Eml2	chr7	protein_coding	echinoderm microtubule associated protein like 2
chr7	18962509	18989281	+	18962509	18978679	3pMXE	0.5	50	50	ENSMUST00000063976.9	ENSMUSG00000052214.10	Opa3	chr7	protein_coding	optic atrophy 3
chr7	18998750	19000293	-	18998750	19005439	A5SS	0.5	50	50	ENSMUST00000032561.9	ENSMUSG00000030403.10	Vasp	chr7	protein_coding	vasodilator-stimulated phosphoprotein
chr7	19025101	19027001	+	19021435	19027001	A5SS	0.5	50	50	ENSMUST00000032559.17	ENSMUSG00000030401.17	Rtn2	chr7	protein_coding	reticulon 2 (Z-band associated protein)
chr7	19039227	19041045	-	19039227;19040591	19040484;19041045	ES	0.5	50	50	ENSMUST00000003640.4	ENSMUSG00000003545.4	Fosb	chr7	protein_coding	FBJ osteosarcoma oncogene B
chr7	19041248	19043231	-	19041365	19043231	A3SS	0.5	50	50	ENSMUST00000003640.4	ENSMUSG00000003545.4	Fosb	chr7	protein_coding	FBJ osteosarcoma oncogene B
chr7	19079642;19081083	19081008;19082326	+	19079642	19082326	cassetteExon	0.5	100	100	ENSMUST00000003645.9	ENSMUSG00000003549.10	Ercc1	chr7	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 1
chr7	19084717	19086558	+	19084717	19086554	A3SS	0.5	50	50	ENSMUST00000003645.9	ENSMUSG00000003549.10	Ercc1	chr7	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 1
chr7	19086630	19088256	+	19086630	19088251	A3SS	0.5	50	50	ENSMUST00000003645.9	ENSMUSG00000003549.10	Ercc1	chr7	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 1
chr7	19083678	19084086	+	19082541	19084086	A5SS	0.5	50	50	ENSMUST00000003645.9	ENSMUSG00000003549.10	Ercc1	chr7	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 1
chr7	19093723;19094761	19094729;19094952	+	19093723	19094952	cassetteExon	0.5	100	100	ENSMUST00000150448.8	ENSMUSG00000040734.15	Ppp1r13l	chr7	protein_coding	protein phosphatase 1, regulatory subunit 13 like
chr7	19095241	19102471	+	19095241	19102467	A3SS	0.5	50	50	ENSMUST00000140836.8	ENSMUSG00000040734.15	Ppp1r13l	chr7	protein_coding	protein phosphatase 1, regulatory subunit 13 like
chr7	19093723	19094952	+	19094761	19094952	5pMXE	0.5	50	50	ENSMUST00000127785.8	ENSMUSG00000040734.15	Ppp1r13l	chr7	protein_coding	protein phosphatase 1, regulatory subunit 13 like
chr7	19115984	19117869	+	19115984;19116303	19116204;19117869	ES	0.5	50	50	ENSMUST00000062831.16	ENSMUSG00000030400.18	Ercc2	chr7	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 2
chr7	19117946	19118227	+	19117946;19118086	19118024;19118227	ES	0.5	50	50	ENSMUST00000062831.16	ENSMUSG00000030400.18	Ercc2	chr7	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 2
chr7	19115984	19120900	+	19115984	19116204	A3SS&ES	0.33	50	50	ENSMUST00000062831.16	ENSMUSG00000030400.18	Ercc2	chr7	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 2
chr7	19127266	19127499	+	19127266	19127358	A3SS&ES	0.5	50	50	ENSMUST00000062831.16	ENSMUSG00000030400.18	Ercc2	chr7	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 2
chr7	19118288	19119548	+	19118340	19119548	A5SS	0.5	50	50	ENSMUST00000062831.16	ENSMUSG00000030400.18	Ercc2	chr7	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 2
chr7	19115984	19117869	+	19115984	19120900	A3SS	0.33	50	50	ENSMUST00000108461.8	ENSMUSG00000030400.18	Ercc2	chr7	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 2
chr7	19115984	19117869	+	19116303	19117869	5pMXE	0.5	50	50	ENSMUST00000127363.2	ENSMUSG00000030400.18	Ercc2	chr7	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 2
chr7	19118340;19119871	19119548;19120632	+	19118340	19120632	cassetteExon	0.5	100	100	ENSMUST00000129249.2	ENSMUSG00000030400.18	Ercc2	chr7	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 2
chr7	19128637	19128810	-	19128646	19128810	A3SS	0.5	50	50	ENSMUST00000108458.10	ENSMUSG00000040714.15	Klc3	chr7	protein_coding	kinesin light chain 3
chr7	19133474	19133639	-	19133474	19137946	A5SS	0.25	50	50	ENSMUST00000108458.10	ENSMUSG00000040714.15	Klc3	chr7	protein_coding	kinesin light chain 3
chr7	19133474	19133734	-	19133474	19137946	A5SS	0.25	50	50	ENSMUST00000108458.10	ENSMUSG00000040714.15	Klc3	chr7	protein_coding	kinesin light chain 3
chr7	19133474	19137680	-	19133474	19137946	A5SS	0.25	50	50	ENSMUST00000108458.10	ENSMUSG00000040714.15	Klc3	chr7	protein_coding	kinesin light chain 3
chr7	19133474	19137680	-	19133474	19133639	5pMXE	0.25	50	50	ENSMUST00000047170.10	ENSMUSG00000040714.15	Klc3	chr7	protein_coding	kinesin light chain 3
chr7	19133474	19133734	-	19133474	19133639	A5SS	0.25	50	50	ENSMUST00000047170.10	ENSMUSG00000040714.15	Klc3	chr7	protein_coding	kinesin light chain 3
chr7	19133474	19137680	-	19133474	19133734	5pMXE	0.25	50	50	ENSMUST00000108459.9	ENSMUSG00000040714.15	Klc3	chr7	protein_coding	kinesin light chain 3
chr7	19145071	19148044	+	19142030	19148044	A5SS	0.5	50	50	ENSMUST00000208079.2	ENSMUSG00000030399.3	Ckm	chr7	protein_coding	creatine kinase, muscle
chr7	19145071	19148822	+	19148255	19148822	A5SS&ES	0.5	50	50	ENSMUST00000208079.2	ENSMUSG00000030399.3	Ckm	chr7	protein_coding	creatine kinase, muscle
chr7	19145071	19148822	+	19145071;19148255	19148044;19148822	ES	0.5	50	50	ENSMUST00000208710.2	ENSMUSG00000030399.3	Ckm	chr7	protein_coding	creatine kinase, muscle
chr7	19153478;19154379	19153983;19155082	-	19153478	19155082	cassetteExon	0.5	100	100	ENSMUST00000208685.2	ENSMUSG00000040705.3	A930016O22Rik	chr7	lncRNA	RIKEN cDNA A930016O22 gene
chr7	19162043	19163251	-	19162043;19163110	19163031;19163251	ES	0.33	50	50	ENSMUST00000239292.2	ENSMUSG00000030397.12	Mark4	chr7	protein_coding	MAP/microtubule affinity regulating kinase 4
chr7	19185681;19191024	19190991;19192369	-	19185681	19192369	cassetteExon	0.5	100	100	ENSMUST00000239292.2	ENSMUSG00000030397.12	Mark4	chr7	protein_coding	MAP/microtubule affinity regulating kinase 4
chr7	19163043	19163251	-	19163110	19163251	A3SS	0.33	50	50	ENSMUST00000239292.2	ENSMUSG00000030397.12	Mark4	chr7	protein_coding	MAP/microtubule affinity regulating kinase 4
chr7	19162043;19163043	19163031;19163251	-	19162043	19163251	cassetteExon	0.5	100	100	ENSMUST00000085715.7	ENSMUSG00000030397.12	Mark4	chr7	protein_coding	MAP/microtubule affinity regulating kinase 4
chr7	19248464	19249129	+	19248464;19249015	19248950;19249129	ES	0.5	50	50	ENSMUST00000136873.8	ENSMUSG00000002043.18	Trappc6a	chr7	protein_coding	trafficking protein particle complex 6A
chr7	19242757;19248193	19248126;19248347	+	19242757	19248347	cassetteExon	0.5	100	100	ENSMUST00000136873.8	ENSMUSG00000002043.18	Trappc6a	chr7	protein_coding	trafficking protein particle complex 6A
chr7	19248464	19248932	+	19248464	19248950	A3SS	0.33	50	50	ENSMUST00000136873.8	ENSMUSG00000002043.18	Trappc6a	chr7	protein_coding	trafficking protein particle complex 6A
chr7	19249222	19249887	+	19249222	19249771	A3SS	0.5	50	50	ENSMUST00000136873.8	ENSMUSG00000002043.18	Trappc6a	chr7	protein_coding	trafficking protein particle complex 6A
chr7	19248464	19249129	+	19248464;19249015	19248932;19249129	ES	0.5	50	50	ENSMUST00000147114.2	ENSMUSG00000002043.18	Trappc6a	chr7	protein_coding	trafficking protein particle complex 6A
chr7	19248464	19249129	+	19249015	19249129	A5SS	0.5	50	50	ENSMUST00000129808.2	ENSMUSG00000002043.18	Trappc6a	chr7	protein_coding	trafficking protein particle complex 6A
chr7	19252746	19255859	+	19252746;19254176	19253727;19255859	ES	0.5	50	50	ENSMUST00000207576.2	ENSMUSG00000060621.7	Nkpd1	chr7	protein_coding	NTPase, KAP family P-loop domain containing 1
chr7	19299601;19303807	19303663;19307234	-	19299601	19307234	cassetteExon	0.5	100	100	ENSMUST00000117222.2	ENSMUSG00000044709.7	Gemin7	chr7	protein_coding	gem nuclear organelle associated protein 7
chr7	19299601	19305354	-	19299601	19307234	A5SS	0.2	50	50	ENSMUST00000117222.2	ENSMUSG00000044709.7	Gemin7	chr7	protein_coding	gem nuclear organelle associated protein 7
chr7	19299601	19306832	-	19299601	19307234	A5SS	0.2	50	50	ENSMUST00000117222.2	ENSMUSG00000044709.7	Gemin7	chr7	protein_coding	gem nuclear organelle associated protein 7
chr7	19299601	19306964	-	19299601	19307234	A5SS	0.2	50	50	ENSMUST00000117222.2	ENSMUSG00000044709.7	Gemin7	chr7	protein_coding	gem nuclear organelle associated protein 7
chr7	19299601	19311258	-	19299601	19307234	5pMXE	0.16	50	50	ENSMUST00000051364.4	ENSMUSG00000044709.7	Gemin7	chr7	protein_coding	gem nuclear organelle associated protein 7
chr7	19299601	19306964	-	19299601	19306832	5pMXE	0.16	50	50	ENSMUST00000122127.2	ENSMUSG00000044709.7	Gemin7	chr7	protein_coding	gem nuclear organelle associated protein 7
chr7	19299601	19311258	-	19299601	19306832	5pMXE	0.16	50	50	ENSMUST00000122127.2	ENSMUSG00000044709.7	Gemin7	chr7	protein_coding	gem nuclear organelle associated protein 7
chr7	19299601	19303663	-	19299601	19306832	A5SS	0.16	50	50	ENSMUST00000122127.2	ENSMUSG00000044709.7	Gemin7	chr7	protein_coding	gem nuclear organelle associated protein 7
chr7	19299601	19305354	-	19299601	19306832	A5SS	0.16	50	50	ENSMUST00000122127.2	ENSMUSG00000044709.7	Gemin7	chr7	protein_coding	gem nuclear organelle associated protein 7
chr7	19299601	19311258	-	19299601	19306964	5pMXE	0.16	50	50	ENSMUST00000122055.2	ENSMUSG00000044709.7	Gemin7	chr7	protein_coding	gem nuclear organelle associated protein 7
chr7	19299601;19305506	19305354;19306964	-	19299601	19306964	cassetteExon	0.5	100	100	ENSMUST00000122055.2	ENSMUSG00000044709.7	Gemin7	chr7	protein_coding	gem nuclear organelle associated protein 7
chr7	19299601	19303663	-	19299601	19306964	A5SS	0.16	50	50	ENSMUST00000122055.2	ENSMUSG00000044709.7	Gemin7	chr7	protein_coding	gem nuclear organelle associated protein 7
chr7	19299601	19305354	-	19299601	19303663	A5SS&ES	0.2	50	50	ENSMUST00000119912.2	ENSMUSG00000044709.7	Gemin7	chr7	protein_coding	gem nuclear organelle associated protein 7
chr7	19299601	19303663	-	19299601	19311258	A5SS	0.16	50	50	ENSMUST00000208826.2	ENSMUSG00000044709.7	Gemin7	chr7	protein_coding	gem nuclear organelle associated protein 7
chr7	19299601	19305354	-	19299601	19311258	A5SS	0.16	50	50	ENSMUST00000208826.2	ENSMUSG00000044709.7	Gemin7	chr7	protein_coding	gem nuclear organelle associated protein 7
chr7	19337226	19338337	-	19337230	19338337	A3SS	0.5	50	50	ENSMUST00000086041.7	ENSMUSG00000061028.8	Clasrp	chr7	protein_coding	CLK4-associating serine/arginine rich protein
chr7	19318455	19318705	-	19318455	19318709	A5SS	0.5	50	50	ENSMUST00000086041.7	ENSMUSG00000061028.8	Clasrp	chr7	protein_coding	CLK4-associating serine/arginine rich protein
chr7	19319272	19319516	-	19319272	19320266	A5SS	0.5	50	50	ENSMUST00000086041.7	ENSMUSG00000061028.8	Clasrp	chr7	protein_coding	CLK4-associating serine/arginine rich protein
chr7	19324260	19325031	-	19324260	19325015	A5SS	0.5	50	50	ENSMUST00000086041.7	ENSMUSG00000061028.8	Clasrp	chr7	protein_coding	CLK4-associating serine/arginine rich protein
chr7	19326002	19328330	-	19326002	19328398	A5SS	0.5	50	50	ENSMUST00000086041.7	ENSMUSG00000061028.8	Clasrp	chr7	protein_coding	CLK4-associating serine/arginine rich protein
chr7	19337230	19338250	-	19337230	19338337	A5SS	0.5	50	50	ENSMUST00000086041.7	ENSMUSG00000061028.8	Clasrp	chr7	protein_coding	CLK4-associating serine/arginine rich protein
chr7	19329481	19337115	-	19328477	19337115	A3SS	0.5	50	50	ENSMUST00000207663.2	ENSMUSG00000061028.8	Clasrp	chr7	protein_coding	CLK4-associating serine/arginine rich protein
chr7	19328477	19328832	-	19328477	19337115	A5SS	0.5	50	50	ENSMUST00000207663.2	ENSMUSG00000061028.8	Clasrp	chr7	protein_coding	CLK4-associating serine/arginine rich protein
chr7	19350362	19353439	-	19350362;19351844	19351687;19353439	ES	0.5	50	50	ENSMUST00000094762.10	ENSMUSG00000002983.18	Relb	chr7	protein_coding	avian reticuloendotheliosis viral (v-rel) oncogene related B
chr7	19353767	19361848	-	19353767;19356859	19356851;19361848	ES	0.5	50	50	ENSMUST00000094762.10	ENSMUSG00000002983.18	Relb	chr7	protein_coding	avian reticuloendotheliosis viral (v-rel) oncogene related B
chr7	19353767;19355080	19355046;19356851	-	19353767	19356851	cassetteExon	0.5	100	100	ENSMUST00000094762.10	ENSMUSG00000002983.18	Relb	chr7	protein_coding	avian reticuloendotheliosis viral (v-rel) oncogene related B
chr7	19345850	19346430	-	19345810	19346430	A3SS	0.5	50	50	ENSMUST00000094762.10	ENSMUSG00000002983.18	Relb	chr7	protein_coding	avian reticuloendotheliosis viral (v-rel) oncogene related B
chr7	19351328	19351687	-	19350362	19351687	A3SS	0.5	50	50	ENSMUST00000094762.10	ENSMUSG00000002983.18	Relb	chr7	protein_coding	avian reticuloendotheliosis viral (v-rel) oncogene related B
chr7	19361895	19362001	-	19361895	19363116	A5SS	0.25	50	50	ENSMUST00000094762.10	ENSMUSG00000002983.18	Relb	chr7	protein_coding	avian reticuloendotheliosis viral (v-rel) oncogene related B
chr7	19361895	19362102	-	19361895	19363116	A5SS	0.25	50	50	ENSMUST00000094762.10	ENSMUSG00000002983.18	Relb	chr7	protein_coding	avian reticuloendotheliosis viral (v-rel) oncogene related B
chr7	19361895	19362533	-	19361895	19363116	A5SS	0.25	50	50	ENSMUST00000094762.10	ENSMUSG00000002983.18	Relb	chr7	protein_coding	avian reticuloendotheliosis viral (v-rel) oncogene related B
chr7	19353767	19355046	-	19353767	19361848	A5SS	0.33	50	50	ENSMUST00000049912.15	ENSMUSG00000002983.18	Relb	chr7	protein_coding	avian reticuloendotheliosis viral (v-rel) oncogene related B
chr7	19350362	19353439	-	19351844	19353439	A3SS&ES	0.5	50	50	ENSMUST00000148040.8	ENSMUSG00000002983.18	Relb	chr7	protein_coding	avian reticuloendotheliosis viral (v-rel) oncogene related B
chr7	19351328	19351687	-	19351328	19351629	A5SS	0.5	50	50	ENSMUST00000148040.8	ENSMUSG00000002983.18	Relb	chr7	protein_coding	avian reticuloendotheliosis viral (v-rel) oncogene related B
chr7	19353767	19361848	-	19353767	19356851	A5SS&ES	0.33	50	50	ENSMUST00000098754.5	ENSMUSG00000002983.18	Relb	chr7	protein_coding	avian reticuloendotheliosis viral (v-rel) oncogene related B
chr7	19361895	19362001	-	19361895	19362533	A5SS	0.25	50	50	ENSMUST00000130543.8	ENSMUSG00000002983.18	Relb	chr7	protein_coding	avian reticuloendotheliosis viral (v-rel) oncogene related B
chr7	19361895	19362102	-	19361895	19362533	A5SS	0.25	50	50	ENSMUST00000130543.8	ENSMUSG00000002983.18	Relb	chr7	protein_coding	avian reticuloendotheliosis viral (v-rel) oncogene related B
chr7	19361895	19362102	-	19361895	19362001	A5SS	0.25	50	50	ENSMUST00000153309.8	ENSMUSG00000002983.18	Relb	chr7	protein_coding	avian reticuloendotheliosis viral (v-rel) oncogene related B
chr7	19389755;19396158	19396070;19398859	-	19389755	19398859	cassetteExon	0.5	100	100	ENSMUST00000055242.11	ENSMUSG00000002981.11	Clptm1	chr7	protein_coding	cleft lip and palate associated transmembrane protein 1
chr7	19389755;19396185	19396070;19398859	-	19389755	19398859	cassetteExon	0.5	100	100	ENSMUST00000055242.11	ENSMUSG00000002981.11	Clptm1	chr7	protein_coding	cleft lip and palate associated transmembrane protein 1
chr7	19389755;19396267	19396070;19398859	-	19389755	19398859	cassetteExon	0.5	100	100	ENSMUST00000055242.11	ENSMUSG00000002981.11	Clptm1	chr7	protein_coding	cleft lip and palate associated transmembrane protein 1
chr7	19396158	19398859	-	19396185	19398859	A3SS	0.25	50	50	ENSMUST00000208215.2	ENSMUSG00000002981.11	Clptm1	chr7	protein_coding	cleft lip and palate associated transmembrane protein 1
chr7	19396267	19398859	-	19396185	19398859	A3SS	0.25	50	50	ENSMUST00000208215.2	ENSMUSG00000002981.11	Clptm1	chr7	protein_coding	cleft lip and palate associated transmembrane protein 1
chr7	19396267	19398859	-	19396158	19398859	A3SS	0.25	50	50	ENSMUST00000208174.2	ENSMUSG00000002981.11	Clptm1	chr7	protein_coding	cleft lip and palate associated transmembrane protein 1
chr7	19407538	19415230	-	19407538	19410647	5pMXE	0.33	50	50	ENSMUST00000003074.16	ENSMUSG00000002992.18	Apoc2	chr7	protein_coding	apolipoprotein C-II
chr7	19407538	19407760	-	19407538	19410647	A5SS	0.33	50	50	ENSMUST00000003074.16	ENSMUSG00000002992.18	Apoc2	chr7	protein_coding	apolipoprotein C-II
chr7	19410809	19415230	-	19410809	19411791	5pMXE	0.5	50	50	ENSMUST00000142352.9	ENSMUSG00000002992.18	Apoc2	chr7	protein_coding	apolipoprotein C-II
chr7	19407538	19415230	-	19407538	19407760	5pMXE	0.33	50	50	ENSMUST00000134116.8	ENSMUSG00000002992.18	Apoc2	chr7	protein_coding	apolipoprotein C-II
chr7	19407538	19415230	-	19407538;19410809	19410647;19415230	ES	0.33	50	50	ENSMUST00000127648.4	ENSMUSG00000109350.2	Gm44805	chr7	protein_coding	predicted gene 44805
chr7	19412667	19415230	-	19410809	19415230	A3SS	0.33	50	50	ENSMUST00000127648.4	ENSMUSG00000109350.2	Gm44805	chr7	protein_coding	predicted gene 44805
chr7	19412667	19415230	-	19407538	19415230	A3SS	0.33	50	50	ENSMUST00000150569.9	ENSMUSG00000109350.2	Gm44805	chr7	protein_coding	predicted gene 44805
chr7	19423561	19426336	-	19423561;19425960	19425813;19426336	ES	0.5	50	50	ENSMUST00000108451.4	ENSMUSG00000040564.15	Apoc1	chr7	protein_coding	apolipoprotein C-I
chr7	19432178;19432398	19432329;19432936	-	19432178	19432936	cassetteExon	0.5	100	100	ENSMUST00000174064.9	ENSMUSG00000002985.17	Apoe	chr7	protein_coding	apolipoprotein E
chr7	19431539	19432113	-	19431572	19432113	A3SS	0.5	50	50	ENSMUST00000174064.9	ENSMUSG00000002985.17	Apoe	chr7	protein_coding	apolipoprotein E
chr7	19432197	19432936	-	19432178	19432936	A3SS	0.33	50	50	ENSMUST00000174064.9	ENSMUSG00000002985.17	Apoe	chr7	protein_coding	apolipoprotein E
chr7	19432178	19432449	-	19432178	19432936	A5SS	0.25	50	50	ENSMUST00000174064.9	ENSMUSG00000002985.17	Apoe	chr7	protein_coding	apolipoprotein E
chr7	19432178	19432897	-	19432178	19432936	A5SS	0.25	50	50	ENSMUST00000174064.9	ENSMUSG00000002985.17	Apoe	chr7	protein_coding	apolipoprotein E
chr7	19432178	19432329	-	19432178	19432897	A5SS	0.25	50	50	ENSMUST00000174355.8	ENSMUSG00000002985.17	Apoe	chr7	protein_coding	apolipoprotein E
chr7	19432178	19432449	-	19432178	19432897	A5SS	0.25	50	50	ENSMUST00000174355.8	ENSMUSG00000002985.17	Apoe	chr7	protein_coding	apolipoprotein E
chr7	19432398	19432936	-	19432197	19432936	A3SS	0.33	50	50	ENSMUST00000003066.16	ENSMUSG00000002985.17	Apoe	chr7	protein_coding	apolipoprotein E
chr7	19432178	19432449	-	19432178	19432329	A5SS&ES	0.25	50	50	ENSMUST00000172983.8	ENSMUSG00000002985.17	Apoe	chr7	protein_coding	apolipoprotein E
chr7	19472299	19484359	-	19472299	19483140	5pMXE	0.5	50	50	ENSMUST00000075447.14	ENSMUSG00000062300.15	Nectin2	chr7	protein_coding	nectin cell adhesion molecule 2
chr7	19458794	19463963	-	19455431	19463963	A3SS	0.5	50	50	ENSMUST00000075447.14	ENSMUSG00000062300.15	Nectin2	chr7	protein_coding	nectin cell adhesion molecule 2
chr7	19502498;19503277	19503223;19504332	-	19502498	19504332	cassetteExon	0.5	100	100	ENSMUST00000003061.14	ENSMUSG00000002980.15	Bcam	chr7	protein_coding	basal cell adhesion molecule
chr7	19519324	19522894	-	19519324;19520239	19520108;19522894	ES	0.5	50	50	ENSMUST00000125050.2	ENSMUSG00000040525.14	Cblc	chr7	protein_coding	Casitas B-lineage lymphoma c
chr7	19526880	19526984	-	19526880	19530358	A5SS	0.5	50	50	ENSMUST00000108449.9	ENSMUSG00000040525.14	Cblc	chr7	protein_coding	Casitas B-lineage lymphoma c
chr7	19519324	19522894	-	19520239	19522894	3pMXE	0.5	50	50	ENSMUST00000145755.2	ENSMUSG00000040525.14	Cblc	chr7	protein_coding	Casitas B-lineage lymphoma c
chr7	19542981	19543067	-	19542855	19543067	A3SS	0.5	50	50	ENSMUST00000135609.8	ENSMUSG00000053175.18	Bcl3	chr7	protein_coding	B cell leukemia/lymphoma 3
chr7	19546438	19549890	-	19546438	19553972	A5SS	0.5	50	50	ENSMUST00000120537.8	ENSMUSG00000053175.18	Bcl3	chr7	protein_coding	B cell leukemia/lymphoma 3
chr7	19554125	19556000	-	19554125	19556362	A5SS	0.5	50	50	ENSMUST00000120537.8	ENSMUSG00000053175.18	Bcl3	chr7	protein_coding	B cell leukemia/lymphoma 3
chr7	19586238	19587715	-	19586238	19587497	A5SS	0.5	50	50	ENSMUST00000014830.8	ENSMUSG00000014686.9	Ceacam16	chr7	protein_coding	carcinoembryonic antigen-related cell adhesion molecule 16
chr7	19678838	19684370	-	19678838;19681259	19681135;19684370	ES	0.5	50	50	ENSMUST00000208974.2	ENSMUSG00000040498.8	Igsf23	chr7	protein_coding	immunoglobulin superfamily, member 23
chr7	19675944	19678501	-	19675944	19678629	A5SS	0.5	50	50	ENSMUST00000208974.2	ENSMUSG00000040498.8	Igsf23	chr7	protein_coding	immunoglobulin superfamily, member 23
chr7	19710235	19712047	+	19710235;19711831	19711714;19712047	ES	0.5	50	50	ENSMUST00000094753.6	ENSMUSG00000070777.6	Ceacam20	chr7	protein_coding	carcinoembryonic antigen-related cell adhesion molecule 20
chr7	19742018	19753061	+	19742018	19753035	A3SS	0.5	50	50	ENSMUST00000207805.2	ENSMUSG00000060508.17	Nlrp9b	chr7	protein_coding	NLR family, pyrin domain containing 9B
chr7	19738037	19741949	+	19725613	19741949	A5SS	0.5	50	50	ENSMUST00000207805.2	ENSMUSG00000060508.17	Nlrp9b	chr7	protein_coding	NLR family, pyrin domain containing 9B
chr7	19779857	19783349	+	19779857;19782777	19782607;19783349	ES	0.5	50	50	ENSMUST00000073151.13	ENSMUSG00000060508.17	Nlrp9b	chr7	protein_coding	NLR family, pyrin domain containing 9B
chr7	19783519	19807096	+	19783519	19796514	3pMXE	0.5	50	50	ENSMUST00000073151.13	ENSMUSG00000060508.17	Nlrp9b	chr7	protein_coding	NLR family, pyrin domain containing 9B
chr7	19757294	19760441	+	19758614	19760441	A5SS	0.5	50	50	ENSMUST00000073151.13	ENSMUSG00000060508.17	Nlrp9b	chr7	protein_coding	NLR family, pyrin domain containing 9B
chr7	23054442	23054532	+	23052766	23054532	A5SS	0.5	50	50	ENSMUST00000076470.5	ENSMUSG00000045693.9	Nlrp4e	chr7	protein_coding	NLR family, pyrin domain containing 4E
chr7	23123488	23129454	+	23123488;23126124	23125954;23129454	ES	0.5	50	50	ENSMUST00000086341.12	ENSMUSG00000015721.19	Nlrp5	chr7	protein_coding	NLR family, pyrin domain containing 5
chr7	23109440;23112777	23112730;23116711	+	23109440	23116711	cassetteExon	0.5	100	100	ENSMUST00000086341.12	ENSMUSG00000015721.19	Nlrp5	chr7	protein_coding	NLR family, pyrin domain containing 5
chr7	23135342	23137392	+	23135342	23137314	A3SS	0.5	50	50	ENSMUST00000086341.12	ENSMUSG00000015721.19	Nlrp5	chr7	protein_coding	NLR family, pyrin domain containing 5
chr7	23120988	23123321	+	23120967	23123321	A5SS	0.5	50	50	ENSMUST00000086341.12	ENSMUSG00000015721.19	Nlrp5	chr7	protein_coding	NLR family, pyrin domain containing 5
chr7	23135260	23137314	+	23135342	23137314	A5SS	0.5	50	50	ENSMUST00000086341.12	ENSMUSG00000015721.19	Nlrp5	chr7	protein_coding	NLR family, pyrin domain containing 5
chr7	23239272	23241160	+	23239272	23240286	A3SS	0.5	50	50	ENSMUST00000235361.2	ENSMUSG00000074291.4	Vmn1r168	chr7	protein_coding	vomeronasal 1 receptor 168
chr7	23275480	23276363	+	23275480	23275940	A3SS	0.5	50	50	ENSMUST00000228832.2	ENSMUSG00000094602.3	Vmn1r169	chr7	protein_coding	vomeronasal 1 receptor 169
chr7	23275195	23275316	+	23275199	23275316	A5SS	0.5	50	50	ENSMUST00000228832.2	ENSMUSG00000094602.3	Vmn1r169	chr7	protein_coding	vomeronasal 1 receptor 169
chr7	23330699	23331166	+	23330699	23331366	A3SS	0.25	50	50	ENSMUST00000227774.2	ENSMUSG00000062483.5	Vmn1r171	chr7	protein_coding	vomeronasal 1 receptor 171
chr7	23330699	23331596	+	23330699	23331366	A3SS	0.25	50	50	ENSMUST00000227774.2	ENSMUSG00000062483.5	Vmn1r171	chr7	protein_coding	vomeronasal 1 receptor 171
chr7	23330699	23331663	+	23330699	23331366	A3SS	0.25	50	50	ENSMUST00000227774.2	ENSMUSG00000062483.5	Vmn1r171	chr7	protein_coding	vomeronasal 1 receptor 171
chr7	23330270	23330536	+	23330419	23330536	A5SS	0.33	50	50	ENSMUST00000227774.2	ENSMUSG00000062483.5	Vmn1r171	chr7	protein_coding	vomeronasal 1 receptor 171
chr7	23330415	23330536	+	23330419	23330536	A5SS	0.33	50	50	ENSMUST00000227774.2	ENSMUSG00000062483.5	Vmn1r171	chr7	protein_coding	vomeronasal 1 receptor 171
chr7	23330415	23330536	+	23330270	23330536	A5SS	0.33	50	50	ENSMUST00000226771.2	ENSMUSG00000062483.5	Vmn1r171	chr7	protein_coding	vomeronasal 1 receptor 171
chr7	23330699	23331166	+	23330699	23331596	A3SS	0.25	50	50	ENSMUST00000228681.2	ENSMUSG00000062483.5	Vmn1r171	chr7	protein_coding	vomeronasal 1 receptor 171
chr7	23330699	23331663	+	23330699	23331596	A3SS	0.25	50	50	ENSMUST00000228681.2	ENSMUSG00000062483.5	Vmn1r171	chr7	protein_coding	vomeronasal 1 receptor 171
chr7	23330699	23331166	+	23330699	23331663	A3SS	0.25	50	50	ENSMUST00000227866.2	ENSMUSG00000062483.5	Vmn1r171	chr7	protein_coding	vomeronasal 1 receptor 171
chr7	23357890	23358914	+	23357890	23359014	A3SS	0.5	50	50	ENSMUST00000038694.9	ENSMUSG00000035523.9	Vmn1r172	chr7	protein_coding	vomeronasal 1 receptor 172
chr7	23400386	23401461	+	23400386	23401278	A3SS	0.5	50	50	ENSMUST00000226233.2	ENSMUSG00000115021.2	Vmn1r173	chr7	protein_coding	vomeronasal 1 receptor 173
chr7	23535399	23536281	-	23535822	23536281	A3SS	0.5	50	50	ENSMUST00000226319.2	ENSMUSG00000096859.3	Vmn1r176	chr7	protein_coding	vomeronasal 1 receptor 176
chr7	23536444	23536561	-	23536444	23536590	A5SS	0.33	50	50	ENSMUST00000226319.2	ENSMUSG00000096859.3	Vmn1r176	chr7	protein_coding	vomeronasal 1 receptor 176
chr7	23536444	23536565	-	23536444	23536590	A5SS	0.33	50	50	ENSMUST00000226319.2	ENSMUSG00000096859.3	Vmn1r176	chr7	protein_coding	vomeronasal 1 receptor 176
chr7	23536444	23536565	-	23536444	23536561	A5SS	0.33	50	50	ENSMUST00000228793.2	ENSMUSG00000096859.3	Vmn1r176	chr7	protein_coding	vomeronasal 1 receptor 176
chr7	23591705	23592802	+	23592067	23592802	A5SS	0.5	50	50	ENSMUST00000226450.2	ENSMUSG00000062598.4	Vmn1r178	chr7	protein_coding	vomeronasal 1 receptor 178
chr7	23674233;23675515	23675420;23682171	+	23674233	23682171	cassetteExon	0.5	100	100	ENSMUST00000228842.2	ENSMUSG00000097425.4	Vmn1r181	chr7	protein_coding	vomeronasal 1 receptor 181
chr7	23682288;23682644	23682520;23683386	+	23682288	23683386	cassetteExon	0.5	100	100	ENSMUST00000228842.2	ENSMUSG00000097425.4	Vmn1r181	chr7	protein_coding	vomeronasal 1 receptor 181
chr7	23681980	23682171	+	23674233	23682171	A5SS	0.33	50	50	ENSMUST00000228842.2	ENSMUSG00000097425.4	Vmn1r181	chr7	protein_coding	vomeronasal 1 receptor 181
chr7	23681980	23682171	+	23675515	23682171	A5SS	0.33	50	50	ENSMUST00000227637.2	ENSMUSG00000097425.4	Vmn1r181	chr7	protein_coding	vomeronasal 1 receptor 181
chr7	23784931	23785913	+	23784931	23803830	A3SS	0.33	50	50	ENSMUST00000207002.2	ENSMUSG00000057101.9	Zfp180	chr7	protein_coding	zinc finger protein 180
chr7	23784931	23797246	+	23784931	23803830	A3SS	0.33	50	50	ENSMUST00000207002.2	ENSMUSG00000057101.9	Zfp180	chr7	protein_coding	zinc finger protein 180
chr7	23800993	23803830	+	23784931	23803830	A5SS	0.5	50	50	ENSMUST00000207002.2	ENSMUSG00000057101.9	Zfp180	chr7	protein_coding	zinc finger protein 180
chr7	23784931;23786016	23785913;23797246	+	23784931	23797246	cassetteExon	0.5	100	100	ENSMUST00000068975.6	ENSMUSG00000057101.9	Zfp180	chr7	protein_coding	zinc finger protein 180
chr7	23797320	23800878	+	23797320	23800873	A3SS	0.5	50	50	ENSMUST00000068975.6	ENSMUSG00000057101.9	Zfp180	chr7	protein_coding	zinc finger protein 180
chr7	23811861;23817808	23817760;23821659	+	23811861	23821659	cassetteExon	0.5	100	100	ENSMUST00000120006.8	ENSMUSG00000052675.12	Zfp112	chr7	protein_coding	zinc finger protein 112
chr7	23823427	23824260	+	23823439	23824260	A5SS	0.5	50	50	ENSMUST00000120006.8	ENSMUSG00000052675.12	Zfp112	chr7	protein_coding	zinc finger protein 112
chr7	23811861	23821659	+	23817808	23821659	5pMXE	0.5	50	50	ENSMUST00000215113.2	ENSMUSG00000052675.12	Zfp112	chr7	protein_coding	zinc finger protein 112
chr7	23834740	23836471	+	23834740	23835411	3pMXE	0.33	50	50	ENSMUST00000205736.2	ENSMUSG00000047603.10	Zfp235	chr7	protein_coding	zinc finger protein 235
chr7	23834740	23835634	+	23834740	23835411	A3SS	0.33	50	50	ENSMUST00000205736.2	ENSMUSG00000047603.10	Zfp235	chr7	protein_coding	zinc finger protein 235
chr7	23836597	23839725	+	23836597;23837927	23837718;23839725	ES	0.5	50	50	ENSMUST00000205680.2	ENSMUSG00000047603.10	Zfp235	chr7	protein_coding	zinc finger protein 235
chr7	23834740	23835634	+	23834740	23836471	A3SS	0.33	50	50	ENSMUST00000205680.2	ENSMUSG00000047603.10	Zfp235	chr7	protein_coding	zinc finger protein 235
chr7	23902921	23907454	-	23902921;23906540	23906483;23907454	ES	0.5	50	50	ENSMUST00000086006.12	ENSMUSG00000087598.10	Zfp111	chr7	protein_coding	zinc finger protein 111
chr7	23906540	23909936	-	23906540	23907454	5pMXE	0.5	50	50	ENSMUST00000086006.12	ENSMUSG00000087598.10	Zfp111	chr7	protein_coding	zinc finger protein 111
chr7	23905831	23906483	-	23902921	23906483	A3SS	0.5	50	50	ENSMUST00000086006.12	ENSMUSG00000087598.10	Zfp111	chr7	protein_coding	zinc finger protein 111
chr7	23902921	23907454	-	23902921	23906483	A5SS&ES	0.5	50	50	ENSMUST00000073833.14	ENSMUSG00000087598.10	Zfp111	chr7	protein_coding	zinc finger protein 111
chr7	23902921	23907454	-	23906540	23907454	3pMXE	0.5	50	50	ENSMUST00000148050.2	ENSMUSG00000087598.10	Zfp111	chr7	protein_coding	zinc finger protein 111
chr7	23933902	23936508	-	23933902;23936100	23936043;23936508	ES	0.5	50	50	ENSMUST00000206362.2	ENSMUSG00000074283.6	Zfp109	chr7	protein_coding	zinc finger protein 109
chr7	23933902	23936508	-	23933902	23936043	5pMXE	0.5	50	50	ENSMUST00000037448.7	ENSMUSG00000074283.6	Zfp109	chr7	protein_coding	zinc finger protein 109
chr7	23954538	23955258	+	23954347	23955258	A5SS	0.5	50	50	ENSMUST00000206777.2	ENSMUSG00000030486.10	Zfp108	chr7	protein_coding	zinc finger protein 108
chr7	23957083	23957878	+	23955315	23957878	A5SS	0.5	50	50	ENSMUST00000206777.2	ENSMUSG00000030486.10	Zfp108	chr7	protein_coding	zinc finger protein 108
chr7	23991929	23994380	-	23991929;23992859	23992770;23994380	ES	0.5	50	50	ENSMUST00000077780.14	ENSMUSG00000050605.18	Zfp61	chr7	protein_coding	zinc finger protein 61
chr7	23994532	23995404	-	23994506	23995404	A3SS	0.5	50	50	ENSMUST00000077780.14	ENSMUSG00000050605.18	Zfp61	chr7	protein_coding	zinc finger protein 61
chr7	23994506	23994896	-	23994506	23995404	A5SS	0.5	50	50	ENSMUST00000077780.14	ENSMUSG00000050605.18	Zfp61	chr7	protein_coding	zinc finger protein 61
chr7	23991929	23994380	-	23992859	23994380	3pMXE	0.5	50	50	ENSMUST00000137342.2	ENSMUSG00000050605.18	Zfp61	chr7	protein_coding	zinc finger protein 61
chr7	24008622	24011807	-	24008622;24010928	24010890;24011807	ES	0.5	50	50	ENSMUST00000108436.8	ENSMUSG00000074282.11	Zfp94	chr7	protein_coding	zinc finger protein 94
chr7	24011920	24013807	-	24011920	24013775	A5SS	0.5	50	50	ENSMUST00000108436.8	ENSMUSG00000074282.11	Zfp94	chr7	protein_coding	zinc finger protein 94
chr7	24013836	24015786	-	24013836	24015944	A5SS	0.5	50	50	ENSMUST00000108436.8	ENSMUSG00000074282.11	Zfp94	chr7	protein_coding	zinc finger protein 94
chr7	24074192	24083539	+	24074192	24076708	A3SS&ES	0.5	50	50	ENSMUST00000205428.2	ENSMUSG00000054342.9	Kcnn4	chr7	protein_coding	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4
chr7	24083607	24084062	+	24083607	24084147	A3SS	0.5	50	50	ENSMUST00000205428.2	ENSMUSG00000054342.9	Kcnn4	chr7	protein_coding	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4
chr7	24099492	24102817	+	24099316	24102817	A5SS	0.5	50	50	ENSMUST00000146381.8	ENSMUSG00000002210.12	Smg9	chr7	protein_coding	smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)
chr7	24114475	24119494	+	24114475	24115924	A3SS&ES	0.5	50	50	ENSMUST00000002280.11	ENSMUSG00000002210.12	Smg9	chr7	protein_coding	smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)
chr7	24132871	24135252	-	24132871	24134748	5pMXE	0.33	50	50	ENSMUST00000080594.8	ENSMUSG00000062028.9	Irgc1	chr7	protein_coding	immunity-related GTPase family, cinema 1
chr7	24132871	24151517	-	24132871	24134748	5pMXE	0.33	50	50	ENSMUST00000080594.8	ENSMUSG00000062028.9	Irgc1	chr7	protein_coding	immunity-related GTPase family, cinema 1
chr7	24150355	24151517	-	24132871	24151517	A3SS	0.33	50	50	ENSMUST00000205385.2	ENSMUSG00000062028.9	Irgc1	chr7	protein_coding	immunity-related GTPase family, cinema 1
chr7	24150692	24151517	-	24132871	24151517	A3SS	0.33	50	50	ENSMUST00000205385.2	ENSMUSG00000062028.9	Irgc1	chr7	protein_coding	immunity-related GTPase family, cinema 1
chr7	24132871	24135252	-	24132871	24151517	A5SS	0.33	50	50	ENSMUST00000205385.2	ENSMUSG00000062028.9	Irgc1	chr7	protein_coding	immunity-related GTPase family, cinema 1
chr7	24150355;24150692	24150597;24151517	-	24150355	24151517	cassetteExon	0.5	100	100	ENSMUST00000206992.2	ENSMUSG00000062028.9	Irgc1	chr7	protein_coding	immunity-related GTPase family, cinema 1
chr7	24164666	24165914	+	24164666	24166100	A3SS	0.5	50	50	ENSMUST00000002284.11	ENSMUSG00000046223.11	Plaur	chr7	protein_coding	plasminogen activator, urokinase receptor
chr7	24171697	24171998	+	24171479	24171998	A5SS	0.5	50	50	ENSMUST00000002284.11	ENSMUSG00000046223.11	Plaur	chr7	protein_coding	plasminogen activator, urokinase receptor
chr7	24199483	24200157	+	24199483;24200065	24199901;24200157	ES	0.5	50	50	ENSMUST00000068023.8	ENSMUSG00000054793.9	Cadm4	chr7	protein_coding	cell adhesion molecule 4
chr7	24206861	24209971	+	24206861	24209948	A3SS	0.33	50	50	ENSMUST00000176880.2	ENSMUSG00000064264.15	Zfp428	chr7	protein_coding	zinc finger protein 428
chr7	24206861	24210110	+	24206861	24209948	A3SS	0.33	50	50	ENSMUST00000176880.2	ENSMUSG00000064264.15	Zfp428	chr7	protein_coding	zinc finger protein 428
chr7	24210178	24214501	+	24210178	24214462	A3SS	0.5	50	50	ENSMUST00000176880.2	ENSMUSG00000064264.15	Zfp428	chr7	protein_coding	zinc finger protein 428
chr7	24206861	24210110	+	24206861	24209971	A3SS	0.33	50	50	ENSMUST00000071361.13	ENSMUSG00000064264.15	Zfp428	chr7	protein_coding	zinc finger protein 428
chr7	24270351	24271634	+	24270351;24270576	24270440;24271634	ES	0.5	50	50	ENSMUST00000205573.2	ENSMUSG00000051768.10	Xrcc1	chr7	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 1
chr7	24271724;24272274	24272192;24272479	+	24271724	24272479	cassetteExon	0.5	100	100	ENSMUST00000205573.2	ENSMUSG00000051768.10	Xrcc1	chr7	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 1
chr7	24247307	24251505	+	24247307	24259161	A3SS	0.5	50	50	ENSMUST00000205573.2	ENSMUSG00000051768.10	Xrcc1	chr7	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 1
chr7	24319615	24321420	+	24319615	24323279	A3SS	0.5	50	50	ENSMUST00000206422.2	ENSMUSG00000074277.5	Phldb3	chr7	protein_coding	pleckstrin homology like domain, family B, member 3
chr7	24370108	24374347	-	24370108	24371377	5pMXE	0.5	50	50	ENSMUST00000078001.7	ENSMUSG00000062773.7	Tex101	chr7	protein_coding	testis expressed gene 101
chr7	24408722;24409453	24409337;24409542	+	24408722	24409542	cassetteExon	0.5	100	100	ENSMUST00000206826.2	ENSMUSG00000045587.10	Lypd10	chr7	protein_coding	Ly6/PLAUR domain containing 10
chr7	24422836	24422926	-	24414783	24422926	A3SS	0.5	50	50	ENSMUST00000205376.2	ENSMUSG00000058717.9	Lypd11	chr7	protein_coding	Ly6/PLAUR domain containing 11
chr7	24423111	24423614	-	24423111	24423906	A5SS	0.5	50	50	ENSMUST00000205376.2	ENSMUSG00000058717.9	Lypd11	chr7	protein_coding	Ly6/PLAUR domain containing 11
chr7	24476764	24480295	+	24476764;24477910	24477551;24480295	ES	0.33	50	50	ENSMUST00000038069.9	ENSMUSG00000054169.8	Ceacam10	chr7	protein_coding	carcinoembryonic antigen-related cell adhesion molecule 10
chr7	24477686	24480295	+	24477910	24480295	A5SS	0.33	50	50	ENSMUST00000038069.9	ENSMUSG00000054169.8	Ceacam10	chr7	protein_coding	carcinoembryonic antigen-related cell adhesion molecule 10
chr7	24476764;24477686	24477551;24480295	+	24476764	24480295	cassetteExon	0.5	100	100	ENSMUST00000206847.2	ENSMUSG00000054169.8	Ceacam10	chr7	protein_coding	carcinoembryonic antigen-related cell adhesion molecule 10
chr7	24566839	24568914	-	24566839	24568954	A5SS	0.5	50	50	ENSMUST00000079306.11	ENSMUSG00000062732.11	Lypd4	chr7	protein_coding	Ly6/Plaur domain containing 4
chr7	24584977;24585612	24585532;24587707	+	24584977	24587707	cassetteExon	0.5	100	100	ENSMUST00000108430.10	ENSMUSG00000040952.17	Rps19	chr7	protein_coding	ribosomal protein S19
chr7	24584274	24584561	+	24584092	24584561	A5SS	0.25	50	50	ENSMUST00000108430.10	ENSMUSG00000040952.17	Rps19	chr7	protein_coding	ribosomal protein S19
chr7	24584279	24584561	+	24584092	24584561	A5SS	0.25	50	50	ENSMUST00000108430.10	ENSMUSG00000040952.17	Rps19	chr7	protein_coding	ribosomal protein S19
chr7	24584294	24584561	+	24584092	24584561	A5SS	0.25	50	50	ENSMUST00000108430.10	ENSMUSG00000040952.17	Rps19	chr7	protein_coding	ribosomal protein S19
chr7	24584274	24584561	+	24584279	24584561	A5SS	0.25	50	50	ENSMUST00000153451.9	ENSMUSG00000040952.17	Rps19	chr7	protein_coding	ribosomal protein S19
chr7	24584294	24584561	+	24584279	24584561	A5SS	0.25	50	50	ENSMUST00000153451.9	ENSMUSG00000040952.17	Rps19	chr7	protein_coding	ribosomal protein S19
chr7	24584274	24584561	+	24584294	24584561	A5SS	0.25	50	50	ENSMUST00000108429.8	ENSMUSG00000040952.17	Rps19	chr7	protein_coding	ribosomal protein S19
chr7	24607359	24611482	+	24607359;24607849	24607736;24611482	ES	0.5	50	50	ENSMUST00000117796.8	ENSMUSG00000040940.19	Arhgef1	chr7	protein_coding	Rho guanine nucleotide exchange factor (GEF) 1
chr7	24607849	24611735	+	24607849;24611580	24611482;24611735	ES	0.5	50	50	ENSMUST00000117796.8	ENSMUSG00000040940.19	Arhgef1	chr7	protein_coding	Rho guanine nucleotide exchange factor (GEF) 1
chr7	24617425	24619056	+	24617425;24618776	24618609;24619056	ES	0.5	50	50	ENSMUST00000117796.8	ENSMUSG00000040940.19	Arhgef1	chr7	protein_coding	Rho guanine nucleotide exchange factor (GEF) 1
chr7	24624912	24625449	+	24624912;24625372	24625209;24625449	ES	0.5	50	50	ENSMUST00000117796.8	ENSMUSG00000040940.19	Arhgef1	chr7	protein_coding	Rho guanine nucleotide exchange factor (GEF) 1
chr7	24602553;24603922	24603523;24607141	+	24602553	24607141	cassetteExon	0.5	100	100	ENSMUST00000117796.8	ENSMUSG00000040940.19	Arhgef1	chr7	protein_coding	Rho guanine nucleotide exchange factor (GEF) 1
chr7	24617425;24617956	24617945;24618609	+	24617425	24618609	cassetteExon	0.5	100	100	ENSMUST00000117796.8	ENSMUSG00000040940.19	Arhgef1	chr7	protein_coding	Rho guanine nucleotide exchange factor (GEF) 1
chr7	24617425;24617960	24617945;24618609	+	24617425	24618609	cassetteExon	0.5	100	100	ENSMUST00000117796.8	ENSMUSG00000040940.19	Arhgef1	chr7	protein_coding	Rho guanine nucleotide exchange factor (GEF) 1
chr7	24617425;24617956	24617948;24618609	+	24617425	24618609	cassetteExon	0.5	100	100	ENSMUST00000117796.8	ENSMUSG00000040940.19	Arhgef1	chr7	protein_coding	Rho guanine nucleotide exchange factor (GEF) 1
chr7	24617425;24617960	24617948;24618609	+	24617425	24618609	cassetteExon	0.5	100	100	ENSMUST00000117796.8	ENSMUSG00000040940.19	Arhgef1	chr7	protein_coding	Rho guanine nucleotide exchange factor (GEF) 1
chr7	24615478	24616229	+	24615478	24616226	A3SS	0.5	50	50	ENSMUST00000117796.8	ENSMUSG00000040940.19	Arhgef1	chr7	protein_coding	Rho guanine nucleotide exchange factor (GEF) 1
chr7	24622866	24623058	+	24622866	24623084	A3SS	0.5	50	50	ENSMUST00000117796.8	ENSMUSG00000040940.19	Arhgef1	chr7	protein_coding	Rho guanine nucleotide exchange factor (GEF) 1
chr7	24602788	24607141	+	24602553	24607141	A5SS	0.33	50	50	ENSMUST00000117796.8	ENSMUSG00000040940.19	Arhgef1	chr7	protein_coding	Rho guanine nucleotide exchange factor (GEF) 1
chr7	24617425	24617945	+	24617425	24619056	A3SS	0.25	50	50	ENSMUST00000047873.16	ENSMUSG00000040940.19	Arhgef1	chr7	protein_coding	Rho guanine nucleotide exchange factor (GEF) 1
chr7	24617425	24617948	+	24617425	24619056	A3SS	0.25	50	50	ENSMUST00000047873.16	ENSMUSG00000040940.19	Arhgef1	chr7	protein_coding	Rho guanine nucleotide exchange factor (GEF) 1
chr7	24617425	24617948	+	24617425	24617945	A3SS	0.25	50	50	ENSMUST00000098683.11	ENSMUSG00000040940.19	Arhgef1	chr7	protein_coding	Rho guanine nucleotide exchange factor (GEF) 1
chr7	24617960	24618609	+	24617956	24618609	A5SS	0.33	50	50	ENSMUST00000098683.11	ENSMUSG00000040940.19	Arhgef1	chr7	protein_coding	Rho guanine nucleotide exchange factor (GEF) 1
chr7	24602553	24607141	+	24602553	24603523	3pMXE	0.5	50	50	ENSMUST00000129383.2	ENSMUSG00000040940.19	Arhgef1	chr7	protein_coding	Rho guanine nucleotide exchange factor (GEF) 1
chr7	24603922	24607141	+	24602788	24607141	A5SS	0.33	50	50	ENSMUST00000206028.2	ENSMUSG00000040940.19	Arhgef1	chr7	protein_coding	Rho guanine nucleotide exchange factor (GEF) 1
chr7	24607359	24611482	+	24607359	24607736	3pMXE	0.5	50	50	ENSMUST00000127761.8	ENSMUSG00000040940.19	Arhgef1	chr7	protein_coding	Rho guanine nucleotide exchange factor (GEF) 1
chr7	24602553	24607141	+	24603922	24607141	5pMXE	0.33	50	50	ENSMUST00000206906.2	ENSMUSG00000040940.19	Arhgef1	chr7	protein_coding	Rho guanine nucleotide exchange factor (GEF) 1
chr7	24607359;24607849	24607736;24611735	+	24607359;24611580	24611482;24611735	MXE	0.5	100	100	ENSMUST00000206906.2	ENSMUSG00000040940.19	Arhgef1	chr7	protein_coding	Rho guanine nucleotide exchange factor (GEF) 1
chr7	24617425	24619056	+	24617425;24618776	24617945;24619056	ES	0.5	50	50	ENSMUST00000145783.8	ENSMUSG00000040940.19	Arhgef1	chr7	protein_coding	Rho guanine nucleotide exchange factor (GEF) 1
chr7	24607849	24611735	+	24607849	24611482	A3SS	0.5	50	50	ENSMUST00000145783.8	ENSMUSG00000040940.19	Arhgef1	chr7	protein_coding	Rho guanine nucleotide exchange factor (GEF) 1
chr7	24617425	24618609	+	24617425	24617945	A3SS	0.25	50	50	ENSMUST00000145783.8	ENSMUSG00000040940.19	Arhgef1	chr7	protein_coding	Rho guanine nucleotide exchange factor (GEF) 1
chr7	24624912	24625449	+	24624912	24625209	3pMXE	0.5	50	50	ENSMUST00000132786.2	ENSMUSG00000040940.19	Arhgef1	chr7	protein_coding	Rho guanine nucleotide exchange factor (GEF) 1
chr7	24669390	24669512	-	24669434	24669512	A3SS	0.5	50	50	ENSMUST00000076961.9	ENSMUSG00000003380.12	Rabac1	chr7	protein_coding	Rab acceptor 1 (prenylated)
chr7	24671283	24671428	-	24671283	24671527	A5SS	0.5	50	50	ENSMUST00000076961.9	ENSMUSG00000003380.12	Rabac1	chr7	protein_coding	Rab acceptor 1 (prenylated)
chr7	24700622	24705180	-	24700583	24705180	A3SS	0.5	50	50	ENSMUST00000102858.10	ENSMUSG00000040907.16	Atp1a3	chr7	protein_coding	ATPase, Na+/K+ transporting, alpha 3 polypeptide
chr7	24760208;24760764	24760521;24762303	-	24760208	24762303	cassetteExon	0.5	100	100	ENSMUST00000205328.2	ENSMUSG00000003378.10	Grik5	chr7	protein_coding	glutamate receptor, ionotropic, kainate 5 (gamma 2)
chr7	24768172	24771465	-	24767997	24771465	A3SS	0.5	50	50	ENSMUST00000205328.2	ENSMUSG00000003378.10	Grik5	chr7	protein_coding	glutamate receptor, ionotropic, kainate 5 (gamma 2)
chr7	24764895	24767435	-	24764895	24767410	A5SS	0.5	50	50	ENSMUST00000205328.2	ENSMUSG00000003378.10	Grik5	chr7	protein_coding	glutamate receptor, ionotropic, kainate 5 (gamma 2)
chr7	24772136	24776232	+	24772136;24775538	24775448;24776232	ES	0.5	50	50	ENSMUST00000206733.2	ENSMUSG00000045252.12	Zfp574	chr7	protein_coding	zinc finger protein 574
chr7	24776907	24778960	+	24776811	24778960	A5SS	0.5	50	50	ENSMUST00000179556.2	ENSMUSG00000045252.12	Zfp574	chr7	protein_coding	zinc finger protein 574
chr7	24799668	24820266	-	24799668;24815579	24815463;24820266	ES	0.33	50	50	ENSMUST00000175774.9	ENSMUSG00000008496.20	Pou2f2	chr7	protein_coding	POU domain, class 2, transcription factor 2
chr7	24820646	24859286	-	24820646	24831850	5pMXE	0.5	50	50	ENSMUST00000175774.9	ENSMUSG00000008496.20	Pou2f2	chr7	protein_coding	POU domain, class 2, transcription factor 2
chr7	24792427;24792786	24792713;24792910	-	24792427	24792910	cassetteExon	0.5	100	100	ENSMUST00000175774.9	ENSMUSG00000008496.20	Pou2f2	chr7	protein_coding	POU domain, class 2, transcription factor 2
chr7	24799668;24815174	24814896;24815463	-	24799668	24815463	cassetteExon	0.5	100	100	ENSMUST00000175774.9	ENSMUSG00000008496.20	Pou2f2	chr7	protein_coding	POU domain, class 2, transcription factor 2
chr7	24792975	24794215	-	24793111	24794215	A3SS	0.5	50	50	ENSMUST00000175774.9	ENSMUSG00000008496.20	Pou2f2	chr7	protein_coding	POU domain, class 2, transcription factor 2
chr7	24797240	24799377	-	24797192	24799377	A3SS	0.5	50	50	ENSMUST00000175774.9	ENSMUSG00000008496.20	Pou2f2	chr7	protein_coding	POU domain, class 2, transcription factor 2
chr7	24815645	24820266	-	24815579	24820266	A3SS	0.33	50	50	ENSMUST00000175774.9	ENSMUSG00000008496.20	Pou2f2	chr7	protein_coding	POU domain, class 2, transcription factor 2
chr7	24799668	24820266	-	24799668;24815645	24815463;24820266	ES	0.33	50	50	ENSMUST00000098679.10	ENSMUSG00000008496.20	Pou2f2	chr7	protein_coding	POU domain, class 2, transcription factor 2
chr7	24792427	24792910	-	24792786	24792910	A3SS	0.5	50	50	ENSMUST00000098679.10	ENSMUSG00000008496.20	Pou2f2	chr7	protein_coding	POU domain, class 2, transcription factor 2
chr7	24799668	24814896	-	24799668	24820266	A5SS	0.33	50	50	ENSMUST00000108416.10	ENSMUSG00000008496.20	Pou2f2	chr7	protein_coding	POU domain, class 2, transcription factor 2
chr7	24854561	24854747	+	24852051	24854747	A5SS	0.5	50	50	ENSMUST00000098678.8	ENSMUSG00000074274.8	D930028M14Rik	chr7	lncRNA	RIKEN cDNA D930028M14 gene
chr7	24928343	24928890	-	24928355	24928890	A3SS	0.5	50	50	ENSMUST00000071739.12	ENSMUSG00000057177.13	Gsk3a	chr7	protein_coding	glycogen synthase kinase 3 alpha
chr7	24990390	24990477	+	24990390	24990480	A3SS	0.5	50	50	ENSMUST00000169266.8	ENSMUSG00000005442.14	Cic	chr7	protein_coding	capicua transcriptional repressor
chr7	24990767	24993399	+	24990767	24990875	A3SS&ES	0.5	50	50	ENSMUST00000169266.8	ENSMUSG00000005442.14	Cic	chr7	protein_coding	capicua transcriptional repressor
chr7	24991739	24991839	+	24991739	24991842	A3SS	0.5	50	50	ENSMUST00000169266.8	ENSMUSG00000005442.14	Cic	chr7	protein_coding	capicua transcriptional repressor
chr7	24967969	24970260	+	24967181	24970260	A5SS	0.5	50	50	ENSMUST00000169266.8	ENSMUSG00000005442.14	Cic	chr7	protein_coding	capicua transcriptional repressor
chr7	24978058	24984274	+	24973058	24984274	A5SS	0.2	50	50	ENSMUST00000169266.8	ENSMUSG00000005442.14	Cic	chr7	protein_coding	capicua transcriptional repressor
chr7	24979156	24984274	+	24973058	24984274	A5SS	0.2	50	50	ENSMUST00000169266.8	ENSMUSG00000005442.14	Cic	chr7	protein_coding	capicua transcriptional repressor
chr7	24982341	24984274	+	24973058	24984274	A5SS	0.2	50	50	ENSMUST00000169266.8	ENSMUSG00000005442.14	Cic	chr7	protein_coding	capicua transcriptional repressor
chr7	24982830	24984274	+	24973058	24984274	A5SS	0.2	50	50	ENSMUST00000169266.8	ENSMUSG00000005442.14	Cic	chr7	protein_coding	capicua transcriptional repressor
chr7	24979156	24984274	+	24978058	24984274	A5SS	0.2	50	50	ENSMUST00000169743.2	ENSMUSG00000005442.14	Cic	chr7	protein_coding	capicua transcriptional repressor
chr7	24982341	24984274	+	24978058	24984274	A5SS	0.2	50	50	ENSMUST00000169743.2	ENSMUSG00000005442.14	Cic	chr7	protein_coding	capicua transcriptional repressor
chr7	24982830	24984274	+	24978058	24984274	A5SS	0.2	50	50	ENSMUST00000169743.2	ENSMUSG00000005442.14	Cic	chr7	protein_coding	capicua transcriptional repressor
chr7	24982341	24984274	+	24979156	24984274	A5SS	0.2	50	50	ENSMUST00000164440.2	ENSMUSG00000005442.14	Cic	chr7	protein_coding	capicua transcriptional repressor
chr7	24982830	24984274	+	24979156	24984274	A5SS	0.2	50	50	ENSMUST00000164440.2	ENSMUSG00000005442.14	Cic	chr7	protein_coding	capicua transcriptional repressor
chr7	24982830	24984274	+	24982341	24984274	A5SS	0.2	50	50	ENSMUST00000163320.8	ENSMUSG00000005442.14	Cic	chr7	protein_coding	capicua transcriptional repressor
chr7	24996600	24996797	-	24996600	24996707	5pMXE	0.5	50	50	ENSMUST00000108410.8	ENSMUSG00000005447.13	Pafah1b3	chr7	protein_coding	platelet-activating factor acetylhydrolase, isoform 1b, subunit 3
chr7	24996475	24996797	-	24996600	24996797	A3SS&ES	0.5	50	50	ENSMUST00000005583.12	ENSMUSG00000005447.13	Pafah1b3	chr7	protein_coding	platelet-activating factor acetylhydrolase, isoform 1b, subunit 3
chr7	25007143	25007246	+	25007101	25007246	A5SS	0.5	50	50	ENSMUST00000140016.2	ENSMUSG00000043843.18	Tmem145	chr7	protein_coding	transmembrane protein 145
chr7	25014330	25014822	+	25014330	25015284	A3SS	0.5	50	50	ENSMUST00000119703.8	ENSMUSG00000043843.18	Tmem145	chr7	protein_coding	transmembrane protein 145
chr7	25067901	25069090	-	25067901;25068532	25068340;25069090	ES	0.5	50	50	ENSMUST00000167591.8	ENSMUSG00000063651.12	Cnfn	chr7	protein_coding	cornifelin
chr7	25116934	25230492	+	25116934	25138389	3pMXE	0.5	50	50	ENSMUST00000206436.2	ENSMUSG00000053714.9	4732471J01Rik	chr7	lncRNA	RIKEN cDNA 4732471J01 gene
chr7	25076295	25077408	+	25076295	25094138	A3SS	0.5	50	50	ENSMUST00000206436.2	ENSMUSG00000053714.9	4732471J01Rik	chr7	lncRNA	RIKEN cDNA 4732471J01 gene
chr7	25095814	25096115	+	25095988	25096115	A5SS	0.5	50	50	ENSMUST00000206436.2	ENSMUSG00000053714.9	4732471J01Rik	chr7	lncRNA	RIKEN cDNA 4732471J01 gene
chr7	25096401	25116826	+	25096331	25116826	A5SS	0.5	50	50	ENSMUST00000206436.2	ENSMUSG00000053714.9	4732471J01Rik	chr7	lncRNA	RIKEN cDNA 4732471J01 gene
chr7	25088078	25097023	-	25088078	25094926	5pMXE	0.25	50	50	ENSMUST00000003207.11	ENSMUSG00000003123.16	Lipe	chr7	protein_coding	lipase, hormone sensitive
chr7	25083105	25083787	-	25083105	25083798	A5SS	0.5	50	50	ENSMUST00000003207.11	ENSMUSG00000003123.16	Lipe	chr7	protein_coding	lipase, hormone sensitive
chr7	25088078	25089144	-	25088078	25094926	A5SS	0.25	50	50	ENSMUST00000003207.11	ENSMUSG00000003123.16	Lipe	chr7	protein_coding	lipase, hormone sensitive
chr7	25088078	25089487	-	25088078	25094926	A5SS	0.25	50	50	ENSMUST00000003207.11	ENSMUSG00000003123.16	Lipe	chr7	protein_coding	lipase, hormone sensitive
chr7	25088078	25097023	-	25088078	25089487	5pMXE	0.25	50	50	ENSMUST00000054301.14	ENSMUSG00000003123.16	Lipe	chr7	protein_coding	lipase, hormone sensitive
chr7	25088078	25089144	-	25088078	25089487	A5SS	0.25	50	50	ENSMUST00000054301.14	ENSMUSG00000003123.16	Lipe	chr7	protein_coding	lipase, hormone sensitive
chr7	25088078	25089144	-	25088078	25097023	A5SS	0.25	50	50	ENSMUST00000149349.2	ENSMUSG00000003123.16	Lipe	chr7	protein_coding	lipase, hormone sensitive
chr7	25099869	25101574	-	25099870	25101574	A3SS	0.5	50	50	ENSMUST00000074040.4	ENSMUSG00000060188.7	Cxcl17	chr7	protein_coding	chemokine (C-X-C motif) ligand 17
chr7	25171498	25173945	-	25171498;25173477	25173223;25173945	ES	0.5	50	50	ENSMUST00000098666.9	ENSMUSG00000074272.11	Ceacam1	chr7	protein_coding	carcinoembryonic antigen-related cell adhesion molecule 1
chr7	25164305;25164945	25164893;25165742	-	25164305	25165742	cassetteExon	0.5	100	100	ENSMUST00000098666.9	ENSMUSG00000074272.11	Ceacam1	chr7	protein_coding	carcinoembryonic antigen-related cell adhesion molecule 1
chr7	25164305;25164945	25164893;25171223	-	25164305;25165862	25165742;25171223	MXE	0.5	100	100	ENSMUST00000098666.9	ENSMUSG00000074272.11	Ceacam1	chr7	protein_coding	carcinoembryonic antigen-related cell adhesion molecule 1
chr7	25164174	25164274	-	25163325	25164274	A3SS	0.5	50	50	ENSMUST00000098666.9	ENSMUSG00000074272.11	Ceacam1	chr7	protein_coding	carcinoembryonic antigen-related cell adhesion molecule 1
chr7	25164945	25171223	-	25164945;25165862	25165742;25171223	ES	0.5	50	50	ENSMUST00000098669.8	ENSMUSG00000074272.11	Ceacam1	chr7	protein_coding	carcinoembryonic antigen-related cell adhesion molecule 1
chr7	25171498;25174229	25173945;25175769	-	25171498	25175769	cassetteExon	0.5	100	100	ENSMUST00000098668.3	ENSMUSG00000074272.11	Ceacam1	chr7	protein_coding	carcinoembryonic antigen-related cell adhesion molecule 1
chr7	25171498	25173223	-	25171498	25175769	A5SS	0.33	50	50	ENSMUST00000098668.3	ENSMUSG00000074272.11	Ceacam1	chr7	protein_coding	carcinoembryonic antigen-related cell adhesion molecule 1
chr7	25164945	25171223	-	25165862	25171223	A3SS	0.5	50	50	ENSMUST00000206717.2	ENSMUSG00000074272.11	Ceacam1	chr7	protein_coding	carcinoembryonic antigen-related cell adhesion molecule 1
chr7	25218615	25220239	-	25218615;25219440	25219388;25220239	ES	0.5	50	50	ENSMUST00000066503.14	ENSMUSG00000054385.15	Ceacam2	chr7	protein_coding	carcinoembryonic antigen-related cell adhesion molecule 2
chr7	25230180	25237999	-	25227441	25237999	A3SS	0.5	50	50	ENSMUST00000066503.14	ENSMUSG00000054385.15	Ceacam2	chr7	protein_coding	carcinoembryonic antigen-related cell adhesion molecule 2
chr7	25227441	25229175	-	25227441	25237999	A5SS	0.33	50	50	ENSMUST00000066503.14	ENSMUSG00000054385.15	Ceacam2	chr7	protein_coding	carcinoembryonic antigen-related cell adhesion molecule 2
chr7	25227441	25236411	-	25227441	25237999	A5SS	0.33	50	50	ENSMUST00000066503.14	ENSMUSG00000054385.15	Ceacam2	chr7	protein_coding	carcinoembryonic antigen-related cell adhesion molecule 2
chr7	25227441	25236411	-	25227441	25229175	A5SS&ES	0.33	50	50	ENSMUST00000044547.10	ENSMUSG00000054385.15	Ceacam2	chr7	protein_coding	carcinoembryonic antigen-related cell adhesion molecule 2
chr7	25320517;25320937	25320849;25321769	+	25320517	25321769	cassetteExon	0.5	100	100	ENSMUST00000077338.12	ENSMUSG00000057229.12	Dmac2	chr7	protein_coding	distal membrane arm assembly complex 2
chr7	25319889	25320321	+	25318885	25320321	A5SS	0.5	50	50	ENSMUST00000077338.12	ENSMUSG00000057229.12	Dmac2	chr7	protein_coding	distal membrane arm assembly complex 2
chr7	25320937	25321398	+	25320937	25321769	A3SS	0.5	50	50	ENSMUST00000126925.8	ENSMUSG00000057229.12	Dmac2	chr7	protein_coding	distal membrane arm assembly complex 2
chr7	25330596	25330767	-	25330439	25330767	A3SS	0.5	50	50	ENSMUST00000205808.2	ENSMUSG00000060376.8	Bckdha	chr7	protein_coding	branched chain ketoacid dehydrogenase E1, alpha polypeptide
chr7	25362675	25363673	+	25362675	25363752	A3SS	0.5	50	50	ENSMUST00000079634.8	ENSMUSG00000061286.8	Exosc5	chr7	protein_coding	exosome component 5
chr7	25359044	25362562	+	25358808	25362562	A5SS	0.5	50	50	ENSMUST00000079634.8	ENSMUSG00000061286.8	Exosc5	chr7	protein_coding	exosome component 5
chr7	25368681	25369911	-	25368923	25369911	A3SS	0.25	50	50	ENSMUST00000079439.10	ENSMUSG00000061702.11	Tmem91	chr7	protein_coding	transmembrane protein 91
chr7	25368753	25369911	-	25368923	25369911	A3SS	0.25	50	50	ENSMUST00000079439.10	ENSMUSG00000061702.11	Tmem91	chr7	protein_coding	transmembrane protein 91
chr7	25368775	25369911	-	25368923	25369911	A3SS	0.25	50	50	ENSMUST00000079439.10	ENSMUSG00000061702.11	Tmem91	chr7	protein_coding	transmembrane protein 91
chr7	25368753	25369911	-	25368681	25369911	A3SS	0.25	50	50	ENSMUST00000150883.8	ENSMUSG00000061702.11	Tmem91	chr7	protein_coding	transmembrane protein 91
chr7	25368775	25369911	-	25368681	25369911	A3SS	0.25	50	50	ENSMUST00000150883.8	ENSMUSG00000061702.11	Tmem91	chr7	protein_coding	transmembrane protein 91
chr7	25368775	25369911	-	25368753	25369911	A3SS	0.25	50	50	ENSMUST00000108404.8	ENSMUSG00000061702.11	Tmem91	chr7	protein_coding	transmembrane protein 91
chr7	25380899	25382740	+	25380899	25382716	A3SS	0.5	50	50	ENSMUST00000205658.2	ENSMUSG00000063439.8	B9d2	chr7	protein_coding	B9 protein domain 2
chr7	25387648	25387985	+	25387648	25391802	A3SS	0.5	50	50	ENSMUST00000002678.10	ENSMUSG00000002603.16	Tgfb1	chr7	protein_coding	transforming growth factor, beta 1
chr7	25388605	25391802	+	25387648	25391802	A5SS	0.5	50	50	ENSMUST00000002678.10	ENSMUSG00000002603.16	Tgfb1	chr7	protein_coding	transforming growth factor, beta 1
chr7	25415612;25416239	25416062;25418343	-	25415612	25418343	cassetteExon	0.5	100	100	ENSMUST00000002683.3	ENSMUSG00000002608.9	Ccdc97	chr7	protein_coding	coiled-coil domain containing 97
chr7	25415612;25416424	25416062;25418343	-	25415612	25418343	cassetteExon	0.5	100	100	ENSMUST00000002683.3	ENSMUSG00000002608.9	Ccdc97	chr7	protein_coding	coiled-coil domain containing 97
chr7	25415612;25416424	25416279;25418343	-	25415612	25418343	cassetteExon	0.5	100	100	ENSMUST00000002683.3	ENSMUSG00000002608.9	Ccdc97	chr7	protein_coding	coiled-coil domain containing 97
chr7	25415612;25417704	25417570;25418343	-	25415612	25418343	cassetteExon	0.5	100	100	ENSMUST00000002683.3	ENSMUSG00000002608.9	Ccdc97	chr7	protein_coding	coiled-coil domain containing 97
chr7	25414269	25415160	-	25414445	25415160	A3SS	0.5	50	50	ENSMUST00000002683.3	ENSMUSG00000002608.9	Ccdc97	chr7	protein_coding	coiled-coil domain containing 97
chr7	25415612;25416239	25416062;25418343	-	25415612;25416424	25416279;25418343	MXE	0.5	100	100	ENSMUST00000125699.3	ENSMUSG00000002608.9	Ccdc97	chr7	protein_coding	coiled-coil domain containing 97
chr7	25415612;25417704	25417570;25418343	-	25415612;25416424	25416279;25418343	MXE	0.5	100	100	ENSMUST00000125699.3	ENSMUSG00000002608.9	Ccdc97	chr7	protein_coding	coiled-coil domain containing 97
chr7	25416424;25417704	25417570;25418343	-	25416424	25418343	cassetteExon	0.5	100	100	ENSMUST00000125699.3	ENSMUSG00000002608.9	Ccdc97	chr7	protein_coding	coiled-coil domain containing 97
chr7	25415612;25416424	25416062;25417570	-	25415612	25417570	cassetteExon	0.5	100	100	ENSMUST00000156365.8	ENSMUSG00000002608.9	Ccdc97	chr7	protein_coding	coiled-coil domain containing 97
chr7	25415612;25416424	25416279;25417570	-	25415612	25417570	cassetteExon	0.5	100	100	ENSMUST00000156365.8	ENSMUSG00000002608.9	Ccdc97	chr7	protein_coding	coiled-coil domain containing 97
chr7	25415612	25418343	-	25415612	25417570	A5SS&ES	0.25	50	50	ENSMUST00000156365.8	ENSMUSG00000002608.9	Ccdc97	chr7	protein_coding	coiled-coil domain containing 97
chr7	25417704	25418343	-	25417704	25418321	A5SS	0.5	50	50	ENSMUST00000156365.8	ENSMUSG00000002608.9	Ccdc97	chr7	protein_coding	coiled-coil domain containing 97
chr7	25415612;25416239	25416062;25418343	-	25415612;25417704	25417570;25418343	MXE	0.5	100	100	ENSMUST00000137046.8	ENSMUSG00000002608.9	Ccdc97	chr7	protein_coding	coiled-coil domain containing 97
chr7	25415612;25416424	25416062;25418343	-	25415612;25417704	25417570;25418343	MXE	0.5	100	100	ENSMUST00000137046.8	ENSMUSG00000002608.9	Ccdc97	chr7	protein_coding	coiled-coil domain containing 97
chr7	25415612	25417570	-	25416424	25417570	3pMXE	0.5	50	50	ENSMUST00000140847.2	ENSMUSG00000002608.9	Ccdc97	chr7	protein_coding	coiled-coil domain containing 97
chr7	25436186	25440253	-	25434250	25440253	A3SS	0.5	50	50	ENSMUST00000206832.2	ENSMUSG00000040725.14	Hnrnpul1	chr7	protein_coding	heterogeneous nuclear ribonucleoprotein U-like 1
chr7	25450415	25453872	-	25450415	25453766	A5SS	0.5	50	50	ENSMUST00000206832.2	ENSMUSG00000040725.14	Hnrnpul1	chr7	protein_coding	heterogeneous nuclear ribonucleoprotein U-like 1
chr7	25470190	25472768	-	25470190;25472550	25472524;25472768	ES	0.5	50	50	ENSMUST00000002677.11	ENSMUSG00000002602.17	Axl	chr7	protein_coding	AXL receptor tyrosine kinase
chr7	25473648	25473940	-	25470190	25473940	A3SS	0.5	50	50	ENSMUST00000132038.3	ENSMUSG00000002602.17	Axl	chr7	protein_coding	AXL receptor tyrosine kinase
chr7	25470190	25472524	-	25470190	25473940	A5SS	0.33	50	50	ENSMUST00000132038.3	ENSMUSG00000002602.17	Axl	chr7	protein_coding	AXL receptor tyrosine kinase
chr7	25470190	25472768	-	25470190	25473940	A5SS	0.33	50	50	ENSMUST00000132038.3	ENSMUSG00000002602.17	Axl	chr7	protein_coding	AXL receptor tyrosine kinase
chr7	25514475	25514764	-	25514475	25515748	A5SS	0.33	50	50	ENSMUST00000043314.10	ENSMUSG00000040703.12	Cyp2s1	chr7	protein_coding	cytochrome P450, family 2, subfamily s, polypeptide 1
chr7	25514475	25515953	-	25514475	25515748	A5SS	0.33	50	50	ENSMUST00000043314.10	ENSMUSG00000040703.12	Cyp2s1	chr7	protein_coding	cytochrome P450, family 2, subfamily s, polypeptide 1
chr7	25514475	25514764	-	25514475	25515953	A5SS	0.33	50	50	ENSMUST00000152560.8	ENSMUSG00000040703.12	Cyp2s1	chr7	protein_coding	cytochrome P450, family 2, subfamily s, polypeptide 1
chr7	25616854;25624824	25624798;25625493	+	25616854	25625493	cassetteExon	0.5	100	100	ENSMUST00000072438.13	ENSMUSG00000030483.15	Cyp2b10	chr7	protein_coding	cytochrome P450, family 2, subfamily b, polypeptide 10
chr7	25959967	25961792	+	25959967;25961674	25961202;25961792	ES	0.5	50	50	ENSMUST00000227232.2	ENSMUSG00000046130.8	Vmn1r184	chr7	protein_coding	vomeronasal 1 receptor, 184
chr7	25962018	25964593	+	25962018	25962482	A3SS	0.33	50	50	ENSMUST00000227232.2	ENSMUSG00000046130.8	Vmn1r184	chr7	protein_coding	vomeronasal 1 receptor, 184
chr7	25962018	25966147	+	25962018	25962482	A3SS	0.33	50	50	ENSMUST00000227232.2	ENSMUSG00000046130.8	Vmn1r184	chr7	protein_coding	vomeronasal 1 receptor, 184
chr7	25962018	25966147	+	25962018	25964593	A3SS	0.33	50	50	ENSMUST00000228145.2	ENSMUSG00000046130.8	Vmn1r184	chr7	protein_coding	vomeronasal 1 receptor, 184
chr7	26085306	26103082	-	26085306	26093393	5pMXE	0.5	50	50	ENSMUST00000041845.14	ENSMUSG00000040614.15	Nlrp9c	chr7	protein_coding	NLR family, pyrin domain containing 9C
chr7	26070886;26071584	26071414;26074672	-	26070886	26074672	cassetteExon	0.5	100	100	ENSMUST00000041845.14	ENSMUSG00000040614.15	Nlrp9c	chr7	protein_coding	NLR family, pyrin domain containing 9C
chr7	26080006;26081871	26081707;26083725	-	26080006	26083725	cassetteExon	0.5	100	100	ENSMUST00000041845.14	ENSMUSG00000040614.15	Nlrp9c	chr7	protein_coding	NLR family, pyrin domain containing 9C
chr7	26064462	26070716	-	26054013	26070716	A3SS	0.5	50	50	ENSMUST00000041845.14	ENSMUSG00000040614.15	Nlrp9c	chr7	protein_coding	NLR family, pyrin domain containing 9C
chr7	26085306	26103082	-	26080006	26103082	A3SS	0.33	50	50	ENSMUST00000160514.8	ENSMUSG00000040614.15	Nlrp9c	chr7	protein_coding	NLR family, pyrin domain containing 9C
chr7	26093685	26103082	-	26080006	26103082	A3SS	0.33	50	50	ENSMUST00000160514.8	ENSMUSG00000040614.15	Nlrp9c	chr7	protein_coding	NLR family, pyrin domain containing 9C
chr7	26080006	26081707	-	26080006	26103082	A5SS	0.33	50	50	ENSMUST00000160514.8	ENSMUSG00000040614.15	Nlrp9c	chr7	protein_coding	NLR family, pyrin domain containing 9C
chr7	26080006	26083725	-	26080006	26103082	A5SS	0.33	50	50	ENSMUST00000160514.8	ENSMUSG00000040614.15	Nlrp9c	chr7	protein_coding	NLR family, pyrin domain containing 9C
chr7	26085306;26093685	26093393;26103082	-	26085306	26103082	cassetteExon	0.5	100	100	ENSMUST00000160948.8	ENSMUSG00000040614.15	Nlrp9c	chr7	protein_coding	NLR family, pyrin domain containing 9C
chr7	26085306	26103082	-	26093685	26103082	3pMXE	0.33	50	50	ENSMUST00000160277.2	ENSMUSG00000040614.15	Nlrp9c	chr7	protein_coding	NLR family, pyrin domain containing 9C
chr7	26135410;26137342	26137262;26143575	+	26135410	26143575	cassetteExon	0.5	100	100	ENSMUST00000068767.10	ENSMUSG00000040601.14	Nlrp4a	chr7	protein_coding	NLR family, pyrin domain containing 4A
chr7	26150244	26150992	+	26150244	26152782	A3SS	0.5	50	50	ENSMUST00000068767.10	ENSMUSG00000040601.14	Nlrp4a	chr7	protein_coding	NLR family, pyrin domain containing 4A
chr7	26135071	26135311	+	26134682	26135311	A5SS	0.33	50	50	ENSMUST00000068767.10	ENSMUSG00000040601.14	Nlrp4a	chr7	protein_coding	NLR family, pyrin domain containing 4A
chr7	26135109	26135311	+	26134682	26135311	A5SS	0.33	50	50	ENSMUST00000068767.10	ENSMUSG00000040601.14	Nlrp4a	chr7	protein_coding	NLR family, pyrin domain containing 4A
chr7	26135109	26135311	+	26135071	26135311	A5SS	0.33	50	50	ENSMUST00000119386.8	ENSMUSG00000040601.14	Nlrp4a	chr7	protein_coding	NLR family, pyrin domain containing 4A
chr7	26234535	26256655	+	26234535;26250507	26250199;26256655	ES	0.5	50	50	ENSMUST00000108387.9	ENSMUSG00000054102.16	Nlrp9a	chr7	protein_coding	NLR family, pyrin domain containing 9A
chr7	26258236	26261871	+	26258236;26260264	26260100;26261871	ES	0.33	50	50	ENSMUST00000108387.9	ENSMUSG00000054102.16	Nlrp9a	chr7	protein_coding	NLR family, pyrin domain containing 9A
chr7	26267428	26270665	+	26267428;26270102	26269932;26270665	ES	0.5	50	50	ENSMUST00000108387.9	ENSMUSG00000054102.16	Nlrp9a	chr7	protein_coding	NLR family, pyrin domain containing 9A
chr7	26234535	26250199	+	26234535	26261871	A3SS	0.33	50	50	ENSMUST00000143149.2	ENSMUSG00000054102.16	Nlrp9a	chr7	protein_coding	NLR family, pyrin domain containing 9A
chr7	26234535	26256655	+	26234535	26261871	A3SS	0.33	50	50	ENSMUST00000143149.2	ENSMUSG00000054102.16	Nlrp9a	chr7	protein_coding	NLR family, pyrin domain containing 9A
chr7	26258236	26261871	+	26234535	26261871	A5SS	0.33	50	50	ENSMUST00000143149.2	ENSMUSG00000054102.16	Nlrp9a	chr7	protein_coding	NLR family, pyrin domain containing 9A
chr7	26260264	26261871	+	26234535	26261871	A5SS	0.33	50	50	ENSMUST00000143149.2	ENSMUSG00000054102.16	Nlrp9a	chr7	protein_coding	NLR family, pyrin domain containing 9A
chr7	26234535	26256655	+	26250507	26256655	5pMXE	0.5	50	50	ENSMUST00000122040.7	ENSMUSG00000054102.16	Nlrp9a	chr7	protein_coding	NLR family, pyrin domain containing 9A
chr7	26315849	26317725	-	26315849;26316505	26316116;26317725	ES	0.5	50	50	ENSMUST00000228467.2	ENSMUSG00000091924.3	Vmn1r185	chr7	protein_coding	vomeronasal 1 receptor 185
chr7	26311567	26315129	-	26313164	26315129	A3SS	0.25	50	50	ENSMUST00000228467.2	ENSMUSG00000091924.3	Vmn1r185	chr7	protein_coding	vomeronasal 1 receptor 185
chr7	26311838	26315129	-	26313164	26315129	A3SS	0.25	50	50	ENSMUST00000228467.2	ENSMUSG00000091924.3	Vmn1r185	chr7	protein_coding	vomeronasal 1 receptor 185
chr7	26311931	26315129	-	26313164	26315129	A3SS	0.25	50	50	ENSMUST00000228467.2	ENSMUSG00000091924.3	Vmn1r185	chr7	protein_coding	vomeronasal 1 receptor 185
chr7	26315916	26316116	-	26315849	26316116	A3SS	0.5	50	50	ENSMUST00000228467.2	ENSMUSG00000091924.3	Vmn1r185	chr7	protein_coding	vomeronasal 1 receptor 185
chr7	26315849	26317725	-	26316505	26317725	A3SS&ES	0.5	50	50	ENSMUST00000228367.2	ENSMUSG00000091924.3	Vmn1r185	chr7	protein_coding	vomeronasal 1 receptor 185
chr7	26311567	26315129	-	26311931	26315129	A3SS	0.25	50	50	ENSMUST00000228004.2	ENSMUSG00000091924.3	Vmn1r185	chr7	protein_coding	vomeronasal 1 receptor 185
chr7	26311838	26315129	-	26311931	26315129	A3SS	0.25	50	50	ENSMUST00000228004.2	ENSMUSG00000091924.3	Vmn1r185	chr7	protein_coding	vomeronasal 1 receptor 185
chr7	26311567	26315129	-	26311838	26315129	A3SS	0.25	50	50	ENSMUST00000227264.2	ENSMUSG00000091924.3	Vmn1r185	chr7	protein_coding	vomeronasal 1 receptor 185
chr7	26534968	26536100	+	26534968;26535382	26535220;26536100	ES	0.33	50	50	ENSMUST00000005685.15	ENSMUSG00000005547.15	Cyp2a5	chr7	protein_coding	cytochrome P450, family 2, subfamily a, polypeptide 5
chr7	26535667	26536100	+	26535382	26536100	A5SS	0.33	50	50	ENSMUST00000005685.15	ENSMUSG00000005547.15	Cyp2a5	chr7	protein_coding	cytochrome P450, family 2, subfamily a, polypeptide 5
chr7	26534968;26535667	26535220;26536100	+	26534968	26536100	cassetteExon	0.5	100	100	ENSMUST00000168869.8	ENSMUSG00000005547.15	Cyp2a5	chr7	protein_coding	cytochrome P450, family 2, subfamily a, polypeptide 5
chr7	26534968	26536100	+	26535667	26536100	5pMXE	0.33	50	50	ENSMUST00000165641.2	ENSMUSG00000005547.15	Cyp2a5	chr7	protein_coding	cytochrome P450, family 2, subfamily a, polypeptide 5
chr7	26828776	26829719	+	26828776;26829318	26829142;26829719	ES	0.5	50	50	ENSMUST00000003100.10	ENSMUSG00000052974.9	Cyp2f2	chr7	protein_coding	cytochrome P450, family 2, subfamily f, polypeptide 2
chr7	26824428	26824624	+	26824428	26828616	A3SS	0.5	50	50	ENSMUST00000003100.10	ENSMUSG00000052974.9	Cyp2f2	chr7	protein_coding	cytochrome P450, family 2, subfamily f, polypeptide 2
chr7	26865153	26865449	-	26865153	26866109	A5SS	0.33	50	50	ENSMUST00000080058.11	ENSMUSG00000058709.12	Egln2	chr7	protein_coding	egl-9 family hypoxia-inducible factor 2
chr7	26865153	26865741	-	26865153	26866109	A5SS	0.33	50	50	ENSMUST00000080058.11	ENSMUSG00000058709.12	Egln2	chr7	protein_coding	egl-9 family hypoxia-inducible factor 2
chr7	26865153	26865449	-	26865153	26865741	A5SS	0.33	50	50	ENSMUST00000108382.2	ENSMUSG00000058709.12	Egln2	chr7	protein_coding	egl-9 family hypoxia-inducible factor 2
chr7	26872384	26874141	-	26872384;26874001	26873847;26874141	ES	0.5	50	50	ENSMUST00000093040.13	ENSMUSG00000053291.16	Rab4b	chr7	protein_coding	RAB4B, member RAS oncogene family
chr7	26875663	26879594	-	26875663	26878152	5pMXE	0.5	50	50	ENSMUST00000093040.13	ENSMUSG00000053291.16	Rab4b	chr7	protein_coding	RAB4B, member RAS oncogene family
chr7	26875318;26876817	26876686;26878152	-	26875318;26875663	26875583;26878152	MXE	0.5	100	100	ENSMUST00000093040.13	ENSMUSG00000053291.16	Rab4b	chr7	protein_coding	RAB4B, member RAS oncogene family
chr7	26872466	26873847	-	26872384	26873847	A3SS	0.5	50	50	ENSMUST00000093040.13	ENSMUSG00000053291.16	Rab4b	chr7	protein_coding	RAB4B, member RAS oncogene family
chr7	26874265	26875204	-	26874203	26875204	A3SS	0.5	50	50	ENSMUST00000093040.13	ENSMUSG00000053291.16	Rab4b	chr7	protein_coding	RAB4B, member RAS oncogene family
chr7	26875474	26875583	-	26875318	26875583	A3SS	0.5	50	50	ENSMUST00000093040.13	ENSMUSG00000053291.16	Rab4b	chr7	protein_coding	RAB4B, member RAS oncogene family
chr7	26876817	26878152	-	26875663	26878152	A3SS	0.5	50	50	ENSMUST00000134462.8	ENSMUSG00000053291.16	Rab4b	chr7	protein_coding	RAB4B, member RAS oncogene family
chr7	26872384	26874141	-	26872384	26873847	5pMXE	0.5	50	50	ENSMUST00000131278.2	ENSMUSG00000053291.16	Rab4b	chr7	protein_coding	RAB4B, member RAS oncogene family
chr7	26879259	26879594	-	26875663	26879594	A3SS	0.5	50	50	ENSMUST00000154724.2	ENSMUSG00000095538.2	Gm21983	chr7	protein_coding	predicted gene 21983
chr7	26879963	26880125	-	26879704	26880125	A3SS	0.5	50	50	ENSMUST00000154724.2	ENSMUSG00000095538.2	Gm21983	chr7	protein_coding	predicted gene 21983
chr7	26892467;26893629	26893507;26894869	-	26892467	26894869	cassetteExon	0.5	100	100	ENSMUST00000163311.9	ENSMUSG00000061479.16	Snrpa	chr7	protein_coding	small nuclear ribonucleoprotein polypeptide A
chr7	26894981	26895416	-	26894981	26895419	A5SS	0.5	50	50	ENSMUST00000122202.8	ENSMUSG00000061479.16	Snrpa	chr7	protein_coding	small nuclear ribonucleoprotein polypeptide A
chr7	26902122	26903336	+	26902122	26903181	A3SS	0.5	50	50	ENSMUST00000179391.8	ENSMUSG00000078786.10	BC024978	chr7	protein_coding	cDNA sequence BC024978
chr7	26907869	26911735	-	26907869	26911737	A5SS	0.5	50	50	ENSMUST00000003850.8	ENSMUSG00000003752.10	Itpkc	chr7	protein_coding	inositol 1,4,5-trisphosphate 3-kinase C
chr7	26942821	26949961	+	26942821;26949853	26949712;26949961	ES	0.5	50	50	ENSMUST00000003860.13	ENSMUSG00000003762.14	Coq8b	chr7	protein_coding	coenzyme Q8B
chr7	26956123	26961593	+	26956123	26956648	3pMXE	0.5	50	50	ENSMUST00000003860.13	ENSMUSG00000003762.14	Coq8b	chr7	protein_coding	coenzyme Q8B
chr7	26950068;26951067	26950855;26951686	+	26950068	26951686	cassetteExon	0.5	100	100	ENSMUST00000003860.13	ENSMUSG00000003762.14	Coq8b	chr7	protein_coding	coenzyme Q8B
chr7	26942821	26942994	+	26942821	26949712	A3SS	0.33	50	50	ENSMUST00000003860.13	ENSMUSG00000003762.14	Coq8b	chr7	protein_coding	coenzyme Q8B
chr7	26942821	26942994	+	26942821	26949961	A3SS	0.33	50	50	ENSMUST00000128090.8	ENSMUSG00000003762.14	Coq8b	chr7	protein_coding	coenzyme Q8B
chr7	26942821	26949961	+	26949853	26949961	5pMXE	0.5	50	50	ENSMUST00000142910.8	ENSMUSG00000003762.14	Coq8b	chr7	protein_coding	coenzyme Q8B
chr7	26957938	26961593	+	26956123	26961593	A5SS	0.25	50	50	ENSMUST00000152342.3	ENSMUSG00000108378.2	Gm44641	chr7	lncRNA	predicted gene 44641
chr7	26958386	26961593	+	26956123	26961593	A5SS	0.25	50	50	ENSMUST00000152342.3	ENSMUSG00000108378.2	Gm44641	chr7	lncRNA	predicted gene 44641
chr7	26960532	26961593	+	26956123	26961593	A5SS	0.25	50	50	ENSMUST00000152342.3	ENSMUSG00000108378.2	Gm44641	chr7	lncRNA	predicted gene 44641
chr7	26958386	26961593	+	26957938	26961593	A5SS	0.25	50	50	ENSMUST00000144010.8	ENSMUSG00000063160.13	Numbl	chr7	protein_coding	numb-like
chr7	26960532	26961593	+	26957938	26961593	A5SS	0.25	50	50	ENSMUST00000144010.8	ENSMUSG00000063160.13	Numbl	chr7	protein_coding	numb-like
chr7	26958386;26960532	26960433;26961593	+	26958386	26961593	cassetteExon	0.5	100	100	ENSMUST00000079258.7	ENSMUSG00000063160.13	Numbl	chr7	protein_coding	numb-like
chr7	27011237	27013662	-	27010212	27013662	A3SS	0.5	50	50	ENSMUST00000038618.13	ENSMUSG00000040488.19	Ltbp4	chr7	protein_coding	latent transforming growth factor beta binding protein 4
chr7	27029743	27032780	-	27029743	27034262	A5SS	0.5	50	50	ENSMUST00000038618.13	ENSMUSG00000040488.19	Ltbp4	chr7	protein_coding	latent transforming growth factor beta binding protein 4
chr7	27007345;27008839	27008346;27009606	-	27007345	27009606	cassetteExon	0.5	100	100	ENSMUST00000125455.2	ENSMUSG00000040488.19	Ltbp4	chr7	protein_coding	latent transforming growth factor beta binding protein 4
chr7	27044753	27047757	-	27044753;27046597	27046427;27047757	ES	0.5	50	50	ENSMUST00000003857.7	ENSMUSG00000089832.9	Shkbp1	chr7	protein_coding	Sh3kbp1 binding protein 1
chr7	27055051	27056711	-	27055051	27055296	5pMXE	0.5	50	50	ENSMUST00000003857.7	ENSMUSG00000089832.9	Shkbp1	chr7	protein_coding	Sh3kbp1 binding protein 1
chr7	27042182	27042668	-	27042185	27042668	A3SS	0.5	50	50	ENSMUST00000003857.7	ENSMUSG00000089832.9	Shkbp1	chr7	protein_coding	Sh3kbp1 binding protein 1
chr7	27051553	27052020	-	27051495	27052020	A3SS	0.5	50	50	ENSMUST00000003857.7	ENSMUSG00000089832.9	Shkbp1	chr7	protein_coding	Sh3kbp1 binding protein 1
chr7	27044753	27044842	-	27044753	27046427	A5SS	0.33	50	50	ENSMUST00000003857.7	ENSMUSG00000089832.9	Shkbp1	chr7	protein_coding	Sh3kbp1 binding protein 1
chr7	27044753	27047757	-	27044753	27044842	5pMXE	0.33	50	50	ENSMUST00000148933.8	ENSMUSG00000089832.9	Shkbp1	chr7	protein_coding	Sh3kbp1 binding protein 1
chr7	27044753	27047757	-	27044753	27046427	5pMXE	0.33	50	50	ENSMUST00000132046.2	ENSMUSG00000089832.9	Shkbp1	chr7	protein_coding	Sh3kbp1 binding protein 1
chr7	27061284	27061824	-	27061284	27061821	A5SS	0.5	50	50	ENSMUST00000108362.8	ENSMUSG00000011751.17	Sptbn4	chr7	protein_coding	spectrin beta, non-erythrocytic 4
chr7	27093729	27095914	-	27093729	27095543	5pMXE	0.33	50	50	ENSMUST00000108364.8	ENSMUSG00000011751.17	Sptbn4	chr7	protein_coding	spectrin beta, non-erythrocytic 4
chr7	27093729	27097376	-	27093729	27095543	5pMXE	0.33	50	50	ENSMUST00000108364.8	ENSMUSG00000011751.17	Sptbn4	chr7	protein_coding	spectrin beta, non-erythrocytic 4
chr7	27093729	27097376	-	27093729	27095914	5pMXE	0.33	50	50	ENSMUST00000108363.8	ENSMUSG00000011751.17	Sptbn4	chr7	protein_coding	spectrin beta, non-erythrocytic 4
chr7	27142006	27146963	-	27142006	27145888	5pMXE	0.5	50	50	ENSMUST00000011895.14	ENSMUSG00000011751.17	Sptbn4	chr7	protein_coding	spectrin beta, non-erythrocytic 4
chr7	27145692	27145888	-	27142006	27145888	A3SS	0.5	50	50	ENSMUST00000011895.14	ENSMUSG00000011751.17	Sptbn4	chr7	protein_coding	spectrin beta, non-erythrocytic 4
chr7	27151975	27158681	+	27147621	27158681	A5SS	0.5	50	50	ENSMUST00000037399.16	ENSMUSG00000040466.17	Blvrb	chr7	protein_coding	biliverdin reductase B (flavin reductase (NADPH))
chr7	27159058	27161992	+	27159077	27161992	A5SS	0.5	50	50	ENSMUST00000037399.16	ENSMUSG00000040466.17	Blvrb	chr7	protein_coding	biliverdin reductase B (flavin reductase (NADPH))
chr7	27186910	27188678	+	27186503	27188678	A5SS	0.5	50	50	ENSMUST00000008528.8	ENSMUSG00000008384.9	Sertad1	chr7	protein_coding	SERTA domain containing 1
chr7	27207528	27215465	+	27207528;27214872	27214676;27215465	ES	0.5	50	50	ENSMUST00000238964.2	ENSMUSG00000053198.15	Prx	chr7	protein_coding	periaxin
chr7	27204188	27204305	+	27204188	27204284	A3SS	0.5	50	50	ENSMUST00000238964.2	ENSMUSG00000053198.15	Prx	chr7	protein_coding	periaxin
chr7	27207528	27215465	+	27207528	27214676	A3SS	0.5	50	50	ENSMUST00000108355.2	ENSMUSG00000053198.15	Prx	chr7	protein_coding	periaxin
chr7	27240693	27241339	-	27240693;27241253	27241111;27241339	ES	0.5	50	50	ENSMUST00000117095.8	ENSMUSG00000003363.16	Pld3	chr7	protein_coding	phospholipase D family, member 3
chr7	27242329	27252423	-	27242329;27244687	27244613;27252423	ES	0.25	50	50	ENSMUST00000117095.8	ENSMUSG00000003363.16	Pld3	chr7	protein_coding	phospholipase D family, member 3
chr7	27242329;27248518	27248435;27252423	-	27242329;27244687	27244613;27252423	MXE	0.5	100	100	ENSMUST00000117095.8	ENSMUSG00000003363.16	Pld3	chr7	protein_coding	phospholipase D family, member 3
chr7	27244710	27252423	-	27244687	27252423	A3SS	0.25	50	50	ENSMUST00000117095.8	ENSMUSG00000003363.16	Pld3	chr7	protein_coding	phospholipase D family, member 3
chr7	27241606	27242064	-	27241606	27242169	A5SS	0.5	50	50	ENSMUST00000117095.8	ENSMUSG00000003363.16	Pld3	chr7	protein_coding	phospholipase D family, member 3
chr7	27242329	27252423	-	27242329;27248518	27248435;27252423	ES	0.25	50	50	ENSMUST00000117611.8	ENSMUSG00000003363.16	Pld3	chr7	protein_coding	phospholipase D family, member 3
chr7	27242329;27244710	27244613;27252423	-	27242329;27248518	27248435;27252423	MXE	0.5	100	100	ENSMUST00000117611.8	ENSMUSG00000003363.16	Pld3	chr7	protein_coding	phospholipase D family, member 3
chr7	27242329;27244710	27244613;27252423	-	27242329	27252423	cassetteExon	0.5	100	100	ENSMUST00000127240.8	ENSMUSG00000003363.16	Pld3	chr7	protein_coding	phospholipase D family, member 3
chr7	27240693	27241339	-	27241253	27241339	3pMXE	0.5	50	50	ENSMUST00000150964.2	ENSMUSG00000003363.16	Pld3	chr7	protein_coding	phospholipase D family, member 3
chr7	27252778	27259977	+	27252778;27255959	27255839;27259977	ES	0.5	50	50	ENSMUST00000067386.14	ENSMUSG00000049643.16	2310022A10Rik	chr7	protein_coding	RIKEN cDNA 2310022A10 gene
chr7	27252778	27253155	+	27252778	27255839	A3SS	0.33	50	50	ENSMUST00000067386.14	ENSMUSG00000049643.16	2310022A10Rik	chr7	protein_coding	RIKEN cDNA 2310022A10 gene
chr7	27271173	27274016	+	27271126	27274016	A5SS	0.33	50	50	ENSMUST00000067386.14	ENSMUSG00000049643.16	2310022A10Rik	chr7	protein_coding	RIKEN cDNA 2310022A10 gene
chr7	27273926	27274016	+	27271126	27274016	A5SS	0.33	50	50	ENSMUST00000067386.14	ENSMUSG00000049643.16	2310022A10Rik	chr7	protein_coding	RIKEN cDNA 2310022A10 gene
chr7	27252778	27253155	+	27252778	27259977	A3SS	0.33	50	50	ENSMUST00000191126.7	ENSMUSG00000049643.16	2310022A10Rik	chr7	protein_coding	RIKEN cDNA 2310022A10 gene
chr7	27273926	27274016	+	27271173	27274016	A5SS	0.33	50	50	ENSMUST00000190656.2	ENSMUSG00000049643.16	2310022A10Rik	chr7	protein_coding	RIKEN cDNA 2310022A10 gene
chr7	27308178	27317633	+	27308178;27315794	27315666;27317633	ES	0.5	50	50	ENSMUST00000108344.9	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27334109	27335689	+	27334109;27335592	27335464;27335689	ES	0.5	50	50	ENSMUST00000108344.9	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27308178;27315580	27315172;27315666	+	27308178	27315666	cassetteExon	0.5	100	100	ENSMUST00000108344.9	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27328415	27328760	+	27328415	27328721	A3SS	0.5	50	50	ENSMUST00000108344.9	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27291864	27308048	+	27291304	27308048	A5SS	0.11	50	50	ENSMUST00000108344.9	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27292254	27308048	+	27291304	27308048	A5SS	0.11	50	50	ENSMUST00000108344.9	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27293009	27308048	+	27291304	27308048	A5SS	0.11	50	50	ENSMUST00000108344.9	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27296680	27308048	+	27291304	27308048	A5SS	0.11	50	50	ENSMUST00000108344.9	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27305362	27308048	+	27291304	27308048	A5SS	0.11	50	50	ENSMUST00000108344.9	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27306830	27308048	+	27291304	27308048	A5SS	0.11	50	50	ENSMUST00000108344.9	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27307340	27308048	+	27291304	27308048	A5SS	0.11	50	50	ENSMUST00000108344.9	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27307537	27308048	+	27291304	27308048	A5SS	0.11	50	50	ENSMUST00000108344.9	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27292254	27308048	+	27291864	27308048	A5SS	0.11	50	50	ENSMUST00000128540.8	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27293009	27308048	+	27291864	27308048	A5SS	0.11	50	50	ENSMUST00000128540.8	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27296680	27308048	+	27291864	27308048	A5SS	0.11	50	50	ENSMUST00000128540.8	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27305362	27308048	+	27291864	27308048	A5SS	0.11	50	50	ENSMUST00000128540.8	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27306830	27308048	+	27291864	27308048	A5SS	0.11	50	50	ENSMUST00000128540.8	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27307340	27308048	+	27291864	27308048	A5SS	0.11	50	50	ENSMUST00000128540.8	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27307537	27308048	+	27291864	27308048	A5SS	0.11	50	50	ENSMUST00000128540.8	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27293009	27308048	+	27292254	27308048	A5SS	0.11	50	50	ENSMUST00000108342.8	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27296680	27308048	+	27292254	27308048	A5SS	0.11	50	50	ENSMUST00000108342.8	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27305362	27308048	+	27292254	27308048	A5SS	0.11	50	50	ENSMUST00000108342.8	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27306830	27308048	+	27292254	27308048	A5SS	0.11	50	50	ENSMUST00000108342.8	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27307340	27308048	+	27292254	27308048	A5SS	0.11	50	50	ENSMUST00000108342.8	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27307537	27308048	+	27292254	27308048	A5SS	0.11	50	50	ENSMUST00000108342.8	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27296680	27308048	+	27293009	27308048	A5SS	0.11	50	50	ENSMUST00000147263.2	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27305362	27308048	+	27293009	27308048	A5SS	0.11	50	50	ENSMUST00000147263.2	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27306830	27308048	+	27293009	27308048	A5SS	0.11	50	50	ENSMUST00000147263.2	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27307340	27308048	+	27293009	27308048	A5SS	0.11	50	50	ENSMUST00000147263.2	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27307537	27308048	+	27293009	27308048	A5SS	0.11	50	50	ENSMUST00000147263.2	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27305362	27308048	+	27296680	27308048	A5SS	0.11	50	50	ENSMUST00000138459.8	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27306830	27308048	+	27296680	27308048	A5SS	0.11	50	50	ENSMUST00000138459.8	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27307340	27308048	+	27296680	27308048	A5SS	0.11	50	50	ENSMUST00000138459.8	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27307537	27308048	+	27296680	27308048	A5SS	0.11	50	50	ENSMUST00000138459.8	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27305362;27306830	27306668;27308048	+	27305362	27308048	cassetteExon	0.5	100	100	ENSMUST00000143499.8	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27308178	27315172	+	27308178	27317633	A3SS	0.33	50	50	ENSMUST00000143499.8	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27307340	27308048	+	27305362	27308048	A5SS	0.11	50	50	ENSMUST00000143499.8	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27307537	27308048	+	27305362	27308048	A5SS	0.11	50	50	ENSMUST00000143499.8	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27307340	27308048	+	27306830	27308048	A5SS	0.25	50	50	ENSMUST00000108343.8	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27307537	27308048	+	27306830	27308048	A5SS	0.25	50	50	ENSMUST00000108343.8	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27307537	27308048	+	27307340	27308048	A5SS	0.11	50	50	ENSMUST00000136962.8	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27334109	27335689	+	27335592	27335689	5pMXE	0.5	50	50	ENSMUST00000136981.2	ENSMUSG00000004056.16	Akt2	chr7	protein_coding	thymoma viral proto-oncogene 2
chr7	27349667	27350295	-	27349667	27350424	A5SS	0.5	50	50	ENSMUST00000206810.2	ENSMUSG00000108592.3	Gm38973	chr7	lncRNA	predicted gene, 38973
chr7	27363998	27367774	-	27363998;27364523	27364375;27367774	ES	0.5	50	50	ENSMUST00000036453.14	ENSMUSG00000040390.14	Map3k10	chr7	protein_coding	mitogen-activated protein kinase kinase kinase 10
chr7	27356411;27357127	27357122;27357277	-	27356411	27357277	cassetteExon	0.5	100	100	ENSMUST00000036453.14	ENSMUSG00000040390.14	Map3k10	chr7	protein_coding	mitogen-activated protein kinase kinase kinase 10
chr7	27367954	27373646	-	27367954	27372768	A5SS	0.5	50	50	ENSMUST00000036453.14	ENSMUSG00000040390.14	Map3k10	chr7	protein_coding	mitogen-activated protein kinase kinase kinase 10
chr7	27363998	27367774	-	27363998	27364375	5pMXE	0.5	50	50	ENSMUST00000152032.2	ENSMUSG00000040390.14	Map3k10	chr7	protein_coding	mitogen-activated protein kinase kinase kinase 10
chr7	27430895;27432550	27432353;27436361	+	27430895	27436361	cassetteExon	0.5	100	100	ENSMUST00000108336.8	ENSMUSG00000037640.16	Zfp60	chr7	protein_coding	zinc finger protein 60
chr7	27437854;27438117	27437993;27440382	+	27437854	27440382	cassetteExon	0.5	100	100	ENSMUST00000108336.8	ENSMUSG00000037640.16	Zfp60	chr7	protein_coding	zinc finger protein 60
chr7	27431089	27436361	+	27430895	27436361	A5SS	0.33	50	50	ENSMUST00000108336.8	ENSMUSG00000037640.16	Zfp60	chr7	protein_coding	zinc finger protein 60
chr7	27432550	27436361	+	27431089	27436361	A5SS	0.33	50	50	ENSMUST00000126884.2	ENSMUSG00000037640.16	Zfp60	chr7	protein_coding	zinc finger protein 60
chr7	27560181	27561962	+	27558795	27561962	A5SS	0.5	50	50	ENSMUST00000205715.2	ENSMUSG00000020420.9	Zfp607a	chr7	protein_coding	zinc finger protein 607A
chr7	27620220;27625835	27625709;27626826	-	27620220	27626826	cassetteExon	0.5	100	100	ENSMUST00000098639.9	ENSMUSG00000070709.13	Zfp974	chr7	protein_coding	zinc finger protein 974
chr7	27624022	27625709	-	27620220	27625709	A3SS	0.5	50	50	ENSMUST00000129341.2	ENSMUSG00000070709.13	Zfp974	chr7	protein_coding	zinc finger protein 974
chr7	27620220	27626826	-	27625835	27626826	3pMXE	0.5	50	50	ENSMUST00000137668.2	ENSMUSG00000070709.13	Zfp974	chr7	protein_coding	zinc finger protein 974
chr7	27664294	27671048	-	27660055	27671048	A3SS	0.5	50	50	ENSMUST00000205874.2	ENSMUSG00000063047.10	Zfp780b	chr7	protein_coding	zinc finger protein 780B
chr7	27674230	27676165	-	27674230	27676177	A5SS	0.5	50	50	ENSMUST00000205874.2	ENSMUSG00000063047.10	Zfp780b	chr7	protein_coding	zinc finger protein 780B
chr7	27748311	27748529	-	27748404	27748529	A3SS	0.5	50	50	ENSMUST00000032824.10	ENSMUSG00000030603.17	Psmc4	chr7	protein_coding	proteasome (prosome, macropain) 26S subunit, ATPase, 4
chr7	27749125	27749408	-	27748627	27749408	A3SS	0.5	50	50	ENSMUST00000032824.10	ENSMUSG00000030603.17	Psmc4	chr7	protein_coding	proteasome (prosome, macropain) 26S subunit, ATPase, 4
chr7	27815147	27816626	+	27813552	27816626	A5SS	0.5	50	50	ENSMUST00000138392.8	ENSMUSG00000047730.18	Fcgbp	chr7	protein_coding	Fc fragment of IgG binding protein
chr7	27874051	27874409	+	27874317	27874409	A5SS&ES	0.5	50	50	ENSMUST00000042405.8	ENSMUSG00000046865.8	Fbl	chr7	protein_coding	fibrillarin
chr7	27884861	27885259	+	27884861	27885139	A3SS	0.5	50	50	ENSMUST00000085901.13	ENSMUSG00000002409.19	Dyrk1b	chr7	protein_coding	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
chr7	27879851	27880934	+	27879065	27880934	A5SS	0.5	50	50	ENSMUST00000085901.13	ENSMUSG00000002409.19	Dyrk1b	chr7	protein_coding	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
chr7	27986669	27987331	-	27984188	27987331	A3SS	0.5	50	50	ENSMUST00000056589.15	ENSMUSG00000046750.19	Selenov	chr7	protein_coding	selenoprotein V
chr7	28010444	28011137	-	28010444	28011350	A5SS	0.5	50	50	ENSMUST00000081946.5	ENSMUSG00000003438.18	Timm50	chr7	protein_coding	translocase of inner mitochondrial membrane 50
chr7	28016538	28016818	-	28016538;28016743	28016641;28016818	ES	0.5	50	50	ENSMUST00000207563.2	ENSMUSG00000003435.10	Supt5	chr7	protein_coding	suppressor of Ty 5, DSIF elongation factor subunit
chr7	28016925	28018164	-	28016925;28017246	28017162;28018164	ES	0.5	50	50	ENSMUST00000207563.2	ENSMUSG00000003435.10	Supt5	chr7	protein_coding	suppressor of Ty 5, DSIF elongation factor subunit
chr7	28030954	28037777	-	28030954;28037448	28037352;28037777	ES	0.5	50	50	ENSMUST00000207563.2	ENSMUSG00000003435.10	Supt5	chr7	protein_coding	suppressor of Ty 5, DSIF elongation factor subunit
chr7	28023407;28025209	28025143;28025375	-	28023407	28025375	cassetteExon	0.5	100	100	ENSMUST00000207563.2	ENSMUSG00000003435.10	Supt5	chr7	protein_coding	suppressor of Ty 5, DSIF elongation factor subunit
chr7	28069922;28070467	28070303;28070540	-	28069922	28070540	cassetteExon	0.5	100	100	ENSMUST00000094644.11	ENSMUSG00000037552.18	Plekhg2	chr7	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 2
chr7	28069919	28070540	-	28069922	28070540	A3SS	0.33	50	50	ENSMUST00000094644.11	ENSMUSG00000037552.18	Plekhg2	chr7	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 2
chr7	28070670	28071062	-	28070670	28071285	A5SS	0.5	50	50	ENSMUST00000094644.11	ENSMUSG00000037552.18	Plekhg2	chr7	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 2
chr7	28070467	28070540	-	28069919	28070540	A3SS	0.33	50	50	ENSMUST00000121085.8	ENSMUSG00000037552.18	Plekhg2	chr7	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 2
chr7	28069922	28070540	-	28070467	28070540	A3SS	0.33	50	50	ENSMUST00000128015.8	ENSMUSG00000037552.18	Plekhg2	chr7	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 2
chr7	28107003	28113297	-	28107003;28107600	28107361;28113297	ES	0.33	50	50	ENSMUST00000208199.2	ENSMUSG00000109336.2	Samd4b	chr7	protein_coding	sterile alpha motif domain containing 4B
chr7	28123262	28297531	-	28123262	28135563	5pMXE	0.5	50	50	ENSMUST00000208199.2	ENSMUSG00000109336.2	Samd4b	chr7	protein_coding	sterile alpha motif domain containing 4B
chr7	28107448	28113297	-	28107600	28113297	A3SS	0.33	50	50	ENSMUST00000208199.2	ENSMUSG00000109336.2	Samd4b	chr7	protein_coding	sterile alpha motif domain containing 4B
chr7	28107003	28113297	-	28107003;28107448	28107361;28113297	ES	0.33	50	50	ENSMUST00000207766.2	ENSMUSG00000109336.2	Samd4b	chr7	protein_coding	sterile alpha motif domain containing 4B
chr7	28136999	28141094	+	28136999;28140955	28140859;28141094	ES	0.5	50	50	ENSMUST00000108292.9	ENSMUSG00000060791.16	Gmfg	chr7	protein_coding	glia maturation factor, gamma
chr7	28140466	28140859	+	28136999	28140859	A5SS	0.33	50	50	ENSMUST00000108292.9	ENSMUSG00000060791.16	Gmfg	chr7	protein_coding	glia maturation factor, gamma
chr7	28140731	28140859	+	28136999	28140859	A5SS	0.33	50	50	ENSMUST00000108292.9	ENSMUSG00000060791.16	Gmfg	chr7	protein_coding	glia maturation factor, gamma
chr7	28140731	28140859	+	28140466	28140859	A5SS	0.33	50	50	ENSMUST00000078845.13	ENSMUSG00000060791.16	Gmfg	chr7	protein_coding	glia maturation factor, gamma
chr7	28151761	28153922	+	28151469	28153922	A5SS	0.5	50	50	ENSMUST00000190954.7	ENSMUSG00000030600.16	Lrfn1	chr7	protein_coding	leucine rich repeat and fibronectin type III domain containing 1
chr7	28159488	28166014	+	28159488	28161420	3pMXE	0.5	50	50	ENSMUST00000189877.7	ENSMUSG00000030600.16	Lrfn1	chr7	protein_coding	leucine rich repeat and fibronectin type III domain containing 1
chr7	28269291;28269738	28269597;28297460	-	28269291	28297460	cassetteExon	0.5	100	100	ENSMUST00000108283.8	ENSMUSG00000030602.14	Pak4	chr7	protein_coding	p21 (RAC1) activated kinase 4
chr7	28329135	28330269	-	28329135	28329899	5pMXE	0.25	50	50	ENSMUST00000159560.3	ENSMUSG00000037469.12	Acp7	chr7	protein_coding	acid phosphatase 7, tartrate resistant
chr7	28329135	28329722	-	28329135	28329899	A5SS	0.25	50	50	ENSMUST00000159560.3	ENSMUSG00000037469.12	Acp7	chr7	protein_coding	acid phosphatase 7, tartrate resistant
chr7	28329135	28329802	-	28329135	28329899	A5SS	0.25	50	50	ENSMUST00000159560.3	ENSMUSG00000037469.12	Acp7	chr7	protein_coding	acid phosphatase 7, tartrate resistant
chr7	28329135	28329722	-	28329135	28330269	A5SS	0.25	50	50	ENSMUST00000239470.2	ENSMUSG00000037469.12	Acp7	chr7	protein_coding	acid phosphatase 7, tartrate resistant
chr7	28329135	28329802	-	28329135	28330269	A5SS	0.25	50	50	ENSMUST00000239470.2	ENSMUSG00000037469.12	Acp7	chr7	protein_coding	acid phosphatase 7, tartrate resistant
chr7	28329135	28329802	-	28329135	28329722	A5SS	0.25	50	50	ENSMUST00000159418.8	ENSMUSG00000037469.12	Acp7	chr7	protein_coding	acid phosphatase 7, tartrate resistant
chr7	28393075	28394156	+	28393075	28394159	A3SS	0.5	50	50	ENSMUST00000039998.11	ENSMUSG00000037463.15	Fbxo27	chr7	protein_coding	F-box protein 27
chr7	28396200	28397054	+	28396200	28397664	A3SS	0.5	50	50	ENSMUST00000039998.11	ENSMUSG00000037463.15	Fbxo27	chr7	protein_coding	F-box protein 27
chr7	28392527	28392695	+	28392397	28392695	A5SS	0.5	50	50	ENSMUST00000039998.11	ENSMUSG00000037463.15	Fbxo27	chr7	protein_coding	F-box protein 27
chr7	28394033	28394156	+	28393075	28394156	A5SS	0.5	50	50	ENSMUST00000108281.8	ENSMUSG00000037463.15	Fbxo27	chr7	protein_coding	F-box protein 27
chr7	28435628	28437090	+	28435628	28436764	A3SS	0.5	50	50	ENSMUST00000032818.13	ENSMUSG00000030598.16	Fbxo17	chr7	protein_coding	F-box protein 17
chr7	28435628	28437090	+	28435628;28436971	28436764;28437090	ES	0.5	50	50	ENSMUST00000108278.9	ENSMUSG00000030598.16	Fbxo17	chr7	protein_coding	F-box protein 17
chr7	28439664	28440140	-	28439664	28440912	A5SS	0.5	50	50	ENSMUST00000171183.2	ENSMUSG00000045948.9	Mrps12	chr7	protein_coding	mitochondrial ribosomal protein S12
chr7	28443762	28445877	+	28443762;28444144	28443986;28445877	ES	0.5	50	50	ENSMUST00000207877.2	ENSMUSG00000070699.6	Sars2	chr7	protein_coding	seryl-aminoacyl-tRNA synthetase 2
chr7	28466292;28467103	28467057;28471236	+	28466292	28471236	cassetteExon	0.5	100	100	ENSMUST00000122915.8	ENSMUSG00000015149.15	Sirt2	chr7	protein_coding	sirtuin 2
chr7	28487253	28487345	+	28487253	28487342	A3SS	0.5	50	50	ENSMUST00000122915.8	ENSMUSG00000015149.15	Sirt2	chr7	protein_coding	sirtuin 2
chr7	28484289	28484805	+	28482323	28484805	A5SS	0.5	50	50	ENSMUST00000122915.8	ENSMUSG00000015149.15	Sirt2	chr7	protein_coding	sirtuin 2
chr7	28466292;28471633	28471236;28476283	+	28466292	28476283	cassetteExon	0.5	100	100	ENSMUST00000170068.9	ENSMUSG00000015149.15	Sirt2	chr7	protein_coding	sirtuin 2
chr7	28466292	28467057	+	28466292	28476283	A3SS	0.33	50	50	ENSMUST00000170068.9	ENSMUSG00000015149.15	Sirt2	chr7	protein_coding	sirtuin 2
chr7	28466292	28471236	+	28467103	28471236	5pMXE	0.5	50	50	ENSMUST00000155327.8	ENSMUSG00000015149.15	Sirt2	chr7	protein_coding	sirtuin 2
chr7	28488430	28489751	+	28488430	28489715	A3SS	0.5	50	50	ENSMUST00000209035.2	ENSMUSG00000051735.8	Rinl	chr7	protein_coding	Ras and Rab interactor-like
chr7	28497148	28497937	+	28497148	28497235	A3SS	0.5	50	50	ENSMUST00000209035.2	ENSMUSG00000051735.8	Rinl	chr7	protein_coding	Ras and Rab interactor-like
chr7	28497148;28497543	28497235;28497937	+	28497148	28497937	cassetteExon	0.5	100	100	ENSMUST00000207462.2	ENSMUSG00000051735.8	Rinl	chr7	protein_coding	Ras and Rab interactor-like
chr7	28497148	28497937	+	28497543	28497937	5pMXE	0.5	50	50	ENSMUST00000207345.2	ENSMUSG00000051735.8	Rinl	chr7	protein_coding	Ras and Rab interactor-like
chr7	28508284	28512704	+	28508284;28510593	28510097;28512704	ES	0.33	50	50	ENSMUST00000174548.8	ENSMUSG00000015165.17	Hnrnpl	chr7	protein_coding	heterogeneous nuclear ribonucleoprotein L
chr7	28514777;28516829	28516760;28517886	+	28514777	28517886	cassetteExon	0.5	100	100	ENSMUST00000174548.8	ENSMUSG00000015165.17	Hnrnpl	chr7	protein_coding	heterogeneous nuclear ribonucleoprotein L
chr7	28508974	28512704	+	28510593	28512704	A5SS&ES	0.33	50	50	ENSMUST00000174548.8	ENSMUSG00000015165.17	Hnrnpl	chr7	protein_coding	heterogeneous nuclear ribonucleoprotein L
chr7	28508974	28512704	+	28508284	28512704	A5SS	0.33	50	50	ENSMUST00000173750.8	ENSMUSG00000015165.17	Hnrnpl	chr7	protein_coding	heterogeneous nuclear ribonucleoprotein L
chr7	28508284	28512704	+	28510593	28512704	5pMXE	0.33	50	50	ENSMUST00000038572.15	ENSMUSG00000015165.17	Hnrnpl	chr7	protein_coding	heterogeneous nuclear ribonucleoprotein L
chr7	28525698	28529639	+	28525698	28529225	3pMXE	0.5	50	50	ENSMUST00000154839.8	ENSMUSG00000053898.13	Ech1	chr7	protein_coding	enoyl coenzyme A hydratase 1, peroxisomal
chr7	28525548	28529225	+	28525698	28529225	A5SS&ES	0.5	50	50	ENSMUST00000154839.8	ENSMUSG00000053898.13	Ech1	chr7	protein_coding	enoyl coenzyme A hydratase 1, peroxisomal
chr7	28530712	28531142	+	28530712;28530885	28530814;28531142	ES	0.5	50	50	ENSMUST00000066264.13	ENSMUSG00000053898.13	Ech1	chr7	protein_coding	enoyl coenzyme A hydratase 1, peroxisomal
chr7	28525698	28529639	+	28529475	28529639	A5SS&ES	0.5	50	50	ENSMUST00000124017.2	ENSMUSG00000053898.13	Ech1	chr7	protein_coding	enoyl coenzyme A hydratase 1, peroxisomal
chr7	28525698;28529475	28529225;28529639	+	28525698	28529639	cassetteExon	0.5	100	100	ENSMUST00000132376.2	ENSMUSG00000053898.13	Ech1	chr7	protein_coding	enoyl coenzyme A hydratase 1, peroxisomal
chr7	28537181;28539877	28539687;28540006	+	28537181	28540006	cassetteExon	0.5	100	100	ENSMUST00000208971.2	ENSMUSG00000053964.18	Lgals4	chr7	protein_coding	lectin, galactose binding, soluble 4
chr7	28540116	28540289	+	28540035	28540289	A5SS	0.5	50	50	ENSMUST00000208971.2	ENSMUSG00000053964.18	Lgals4	chr7	protein_coding	lectin, galactose binding, soluble 4
chr7	28588681	28589581	+	28588681;28589263	28589206;28589581	ES	0.5	50	50	ENSMUST00000066880.6	ENSMUSG00000054083.9	Capn12	chr7	protein_coding	calpain 12
chr7	28594084;28594605	28594546;28594857	-	28594084	28594857	cassetteExon	0.5	100	100	ENSMUST00000068045.14	ENSMUSG00000054808.16	Actn4	chr7	protein_coding	actinin alpha 4
chr7	28594084;28594611	28594546;28595514	-	28594084;28594937	28594857;28595514	MXE	0.5	100	100	ENSMUST00000068045.14	ENSMUSG00000054808.16	Actn4	chr7	protein_coding	actinin alpha 4
chr7	28606489;28609413	28609328;28611665	-	28606489;28611000	28610915;28611665	MXE	0.5	100	100	ENSMUST00000068045.14	ENSMUSG00000054808.16	Actn4	chr7	protein_coding	actinin alpha 4
chr7	28606489	28606723	-	28606489	28610915	A5SS	0.25	50	50	ENSMUST00000068045.14	ENSMUSG00000054808.16	Actn4	chr7	protein_coding	actinin alpha 4
chr7	28606489	28606971	-	28606489	28610915	A5SS	0.25	50	50	ENSMUST00000068045.14	ENSMUSG00000054808.16	Actn4	chr7	protein_coding	actinin alpha 4
chr7	28618493	28618581	-	28618493	28661444	A5SS	0.33	50	50	ENSMUST00000068045.14	ENSMUSG00000054808.16	Actn4	chr7	protein_coding	actinin alpha 4
chr7	28618493	28649057	-	28618493	28661444	A5SS	0.33	50	50	ENSMUST00000068045.14	ENSMUSG00000054808.16	Actn4	chr7	protein_coding	actinin alpha 4
chr7	28606489	28606971	-	28606489	28606723	5pMXE	0.25	50	50	ENSMUST00000144909.8	ENSMUSG00000054808.16	Actn4	chr7	protein_coding	actinin alpha 4
chr7	28606489	28609328	-	28606489	28606723	5pMXE	0.25	50	50	ENSMUST00000144909.8	ENSMUSG00000054808.16	Actn4	chr7	protein_coding	actinin alpha 4
chr7	28594611	28595514	-	28594937	28595514	A3SS&ES	0.5	50	50	ENSMUST00000217157.2	ENSMUSG00000054808.16	Actn4	chr7	protein_coding	actinin alpha 4
chr7	28606489	28606971	-	28606489	28609328	A5SS	0.25	50	50	ENSMUST00000127210.8	ENSMUSG00000054808.16	Actn4	chr7	protein_coding	actinin alpha 4
chr7	28618493	28649057	-	28618493	28618581	5pMXE	0.33	50	50	ENSMUST00000140622.8	ENSMUSG00000054808.16	Actn4	chr7	protein_coding	actinin alpha 4
chr7	28677415	28681099	-	28677415;28679967	28679869;28681099	ES	0.5	50	50	ENSMUST00000066070.7	ENSMUSG00000053565.11	Eif3k	chr7	protein_coding	eukaryotic translation initiation factor 3, subunit K
chr7	28671710	28671957	-	28670863	28671957	A3SS	0.5	50	50	ENSMUST00000066070.7	ENSMUSG00000053565.11	Eif3k	chr7	protein_coding	eukaryotic translation initiation factor 3, subunit K
chr7	28677415	28679744	-	28677415	28679869	A5SS	0.33	50	50	ENSMUST00000066070.7	ENSMUSG00000053565.11	Eif3k	chr7	protein_coding	eukaryotic translation initiation factor 3, subunit K
chr7	28677415;28679967	28679744;28681099	-	28677415	28681099	cassetteExon	0.5	100	100	ENSMUST00000207683.2	ENSMUSG00000053565.11	Eif3k	chr7	protein_coding	eukaryotic translation initiation factor 3, subunit K
chr7	28701415;28701828	28701773;28702522	+	28701415	28702522	cassetteExon	0.5	100	100	ENSMUST00000208227.2	ENSMUSG00000037337.12	Map4k1	chr7	protein_coding	mitogen-activated protein kinase kinase kinase kinase 1
chr7	28699519	28699616	+	28699447	28699616	A5SS	0.5	50	50	ENSMUST00000208227.2	ENSMUSG00000037337.12	Map4k1	chr7	protein_coding	mitogen-activated protein kinase kinase kinase kinase 1
chr7	28743354	28745029	-	28743354;28744361	28744344;28745029	ES	0.5	50	50	ENSMUST00000214374.2	ENSMUSG00000030592.19	Ryr1	chr7	protein_coding	ryanodine receptor 1, skeletal muscle
chr7	28815612	28816759	-	28815612;28816653	28816633;28816759	ES	0.5	50	50	ENSMUST00000214374.2	ENSMUSG00000030592.19	Ryr1	chr7	protein_coding	ryanodine receptor 1, skeletal muscle
chr7	28745102	28746059	-	28745102	28746230	A5SS	0.5	50	50	ENSMUST00000214374.2	ENSMUSG00000030592.19	Ryr1	chr7	protein_coding	ryanodine receptor 1, skeletal muscle
chr7	28739428	28739813	-	28737853	28739813	A3SS	0.5	50	50	ENSMUST00000179893.9	ENSMUSG00000030592.19	Ryr1	chr7	protein_coding	ryanodine receptor 1, skeletal muscle
chr7	28737853	28737966	-	28737853	28739813	A5SS	0.5	50	50	ENSMUST00000179893.9	ENSMUSG00000030592.19	Ryr1	chr7	protein_coding	ryanodine receptor 1, skeletal muscle
chr7	28844673	28847792	+	28844673;28845508	28845233;28847792	ES	0.33	50	50	ENSMUST00000161522.8	ENSMUSG00000030589.16	Rasgrp4	chr7	protein_coding	RAS guanyl releasing protein 4
chr7	28849716;28850063	28849959;28850871	+	28849716	28850871	cassetteExon	0.5	100	100	ENSMUST00000161522.8	ENSMUSG00000030589.16	Rasgrp4	chr7	protein_coding	RAS guanyl releasing protein 4
chr7	28839798	28839913	+	28839798	28839955	A3SS	0.5	50	50	ENSMUST00000161522.8	ENSMUSG00000030589.16	Rasgrp4	chr7	protein_coding	RAS guanyl releasing protein 4
chr7	28840066	28842421	+	28840066	28842391	A3SS	0.2	50	50	ENSMUST00000161522.8	ENSMUSG00000030589.16	Rasgrp4	chr7	protein_coding	RAS guanyl releasing protein 4
chr7	28840066	28842493	+	28840066	28842391	A3SS	0.2	50	50	ENSMUST00000161522.8	ENSMUSG00000030589.16	Rasgrp4	chr7	protein_coding	RAS guanyl releasing protein 4
chr7	28844673	28845440	+	28844673	28845233	A3SS	0.33	50	50	ENSMUST00000161522.8	ENSMUSG00000030589.16	Rasgrp4	chr7	protein_coding	RAS guanyl releasing protein 4
chr7	28849260	28849369	+	28849260	28849347	A3SS	0.5	50	50	ENSMUST00000161522.8	ENSMUSG00000030589.16	Rasgrp4	chr7	protein_coding	RAS guanyl releasing protein 4
chr7	28848571	28849224	+	28848556	28849224	A5SS	0.5	50	50	ENSMUST00000161522.8	ENSMUSG00000030589.16	Rasgrp4	chr7	protein_coding	RAS guanyl releasing protein 4
chr7	28840066	28842421	+	28840066	28842493	A3SS	0.2	50	50	ENSMUST00000204845.3	ENSMUSG00000030589.16	Rasgrp4	chr7	protein_coding	RAS guanyl releasing protein 4
chr7	28840066;28845508	28845233;28847792	+	28840066	28847792	cassetteExon	0.5	100	100	ENSMUST00000205027.3	ENSMUSG00000030589.16	Rasgrp4	chr7	protein_coding	RAS guanyl releasing protein 4
chr7	28840066	28842391	+	28840066	28847792	A3SS	0.2	50	50	ENSMUST00000205027.3	ENSMUSG00000030589.16	Rasgrp4	chr7	protein_coding	RAS guanyl releasing protein 4
chr7	28840066	28842421	+	28840066	28847792	A3SS	0.2	50	50	ENSMUST00000205027.3	ENSMUSG00000030589.16	Rasgrp4	chr7	protein_coding	RAS guanyl releasing protein 4
chr7	28840066	28842493	+	28840066	28847792	A3SS	0.2	50	50	ENSMUST00000205027.3	ENSMUSG00000030589.16	Rasgrp4	chr7	protein_coding	RAS guanyl releasing protein 4
chr7	28844673	28847792	+	28840066	28847792	A5SS	0.33	50	50	ENSMUST00000205027.3	ENSMUSG00000030589.16	Rasgrp4	chr7	protein_coding	RAS guanyl releasing protein 4
chr7	28840066	28842391	+	28840066	28845233	A3SS	0.2	50	50	ENSMUST00000204194.3	ENSMUSG00000030589.16	Rasgrp4	chr7	protein_coding	RAS guanyl releasing protein 4
chr7	28840066	28842421	+	28840066	28845233	A3SS	0.2	50	50	ENSMUST00000204194.3	ENSMUSG00000030589.16	Rasgrp4	chr7	protein_coding	RAS guanyl releasing protein 4
chr7	28840066	28842493	+	28840066	28845233	A3SS	0.2	50	50	ENSMUST00000204194.3	ENSMUSG00000030589.16	Rasgrp4	chr7	protein_coding	RAS guanyl releasing protein 4
chr7	28844673	28845233	+	28840066	28845233	A5SS	0.5	50	50	ENSMUST00000204194.3	ENSMUSG00000030589.16	Rasgrp4	chr7	protein_coding	RAS guanyl releasing protein 4
chr7	28844673	28847792	+	28845508	28847792	A5SS&ES	0.33	50	50	ENSMUST00000204194.3	ENSMUSG00000030589.16	Rasgrp4	chr7	protein_coding	RAS guanyl releasing protein 4
chr7	28840066;28845508	28845233;28847792	+	28840066;28844673	28842391;28847792	MXE	0.5	100	100	ENSMUST00000203070.3	ENSMUSG00000030589.16	Rasgrp4	chr7	protein_coding	RAS guanyl releasing protein 4
chr7	28844673;28845508	28845440;28847792	+	28844673	28847792	cassetteExon	0.5	100	100	ENSMUST00000203070.3	ENSMUSG00000030589.16	Rasgrp4	chr7	protein_coding	RAS guanyl releasing protein 4
chr7	28852272	28853844	-	28852272;28852914	28852747;28853844	ES	0.33	50	50	ENSMUST00000164589.9	ENSMUSG00000030590.16	Fam98c	chr7	protein_coding	family with sequence similarity 98, member C
chr7	28852914	28854041	-	28852914;28853960	28853844;28854041	ES	0.33	50	50	ENSMUST00000164589.9	ENSMUSG00000030590.16	Fam98c	chr7	protein_coding	family with sequence similarity 98, member C
chr7	28853960	28854577	-	28853960;28854118	28854041;28854577	ES	0.5	50	50	ENSMUST00000164589.9	ENSMUSG00000030590.16	Fam98c	chr7	protein_coding	family with sequence similarity 98, member C
chr7	28854118	28855100	-	28854118;28854782	28854577;28855100	ES	0.5	50	50	ENSMUST00000164589.9	ENSMUSG00000030590.16	Fam98c	chr7	protein_coding	family with sequence similarity 98, member C
chr7	28853063	28853844	-	28852914	28853844	A3SS	0.33	50	50	ENSMUST00000164589.9	ENSMUSG00000030590.16	Fam98c	chr7	protein_coding	family with sequence similarity 98, member C
chr7	28853956	28854041	-	28853960	28854041	A3SS	0.33	50	50	ENSMUST00000164589.9	ENSMUSG00000030590.16	Fam98c	chr7	protein_coding	family with sequence similarity 98, member C
chr7	28854782	28854974	-	28854782	28855100	A5SS	0.5	50	50	ENSMUST00000164589.9	ENSMUSG00000030590.16	Fam98c	chr7	protein_coding	family with sequence similarity 98, member C
chr7	28852914	28854041	-	28852914;28853956	28853844;28854041	ES	0.33	50	50	ENSMUST00000134176.8	ENSMUSG00000030590.16	Fam98c	chr7	protein_coding	family with sequence similarity 98, member C
chr7	28853960	28854577	-	28854118	28854577	A3SS&ES	0.5	50	50	ENSMUST00000134176.8	ENSMUSG00000030590.16	Fam98c	chr7	protein_coding	family with sequence similarity 98, member C
chr7	28855234	28855310	-	28855234	28855456	A5SS	0.5	50	50	ENSMUST00000134176.8	ENSMUSG00000030590.16	Fam98c	chr7	protein_coding	family with sequence similarity 98, member C
chr7	28854118	28855100	-	28854118	28854577	A5SS	0.5	50	50	ENSMUST00000150431.8	ENSMUSG00000030590.16	Fam98c	chr7	protein_coding	family with sequence similarity 98, member C
chr7	28852914	28854041	-	28853960	28854041	A3SS	0.33	50	50	ENSMUST00000147561.8	ENSMUSG00000030590.16	Fam98c	chr7	protein_coding	family with sequence similarity 98, member C
chr7	28852272	28853844	-	28852272	28852747	A5SS	0.5	50	50	ENSMUST00000147561.8	ENSMUSG00000030590.16	Fam98c	chr7	protein_coding	family with sequence similarity 98, member C
chr7	28852272;28853063	28852747;28853844	-	28852272	28853844	cassetteExon	0.5	100	100	ENSMUST00000144795.8	ENSMUSG00000030590.16	Fam98c	chr7	protein_coding	family with sequence similarity 98, member C
chr7	28853960;28854118	28854041;28855100	-	28853960;28854782	28854577;28855100	MXE	0.5	100	100	ENSMUST00000144795.8	ENSMUSG00000030590.16	Fam98c	chr7	protein_coding	family with sequence similarity 98, member C
chr7	28852272;28853956	28853844;28854041	-	28852272;28852914	28852747;28854041	MXE	0.5	100	100	ENSMUST00000153251.8	ENSMUSG00000030590.16	Fam98c	chr7	protein_coding	family with sequence similarity 98, member C
chr7	28852272;28853960	28853844;28854041	-	28852272;28852914	28852747;28854041	MXE	0.5	100	100	ENSMUST00000153251.8	ENSMUSG00000030590.16	Fam98c	chr7	protein_coding	family with sequence similarity 98, member C
chr7	28852272;28853960	28853844;28854577	-	28852272;28854118	28852747;28854577	MXE	0.5	100	100	ENSMUST00000153251.8	ENSMUSG00000030590.16	Fam98c	chr7	protein_coding	family with sequence similarity 98, member C
chr7	28852914;28853960	28853844;28854577	-	28852914;28854118	28854041;28854577	MXE	0.5	100	100	ENSMUST00000153251.8	ENSMUSG00000030590.16	Fam98c	chr7	protein_coding	family with sequence similarity 98, member C
chr7	28852272	28853844	-	28853063	28853844	3pMXE	0.33	50	50	ENSMUST00000138084.2	ENSMUSG00000030590.16	Fam98c	chr7	protein_coding	family with sequence similarity 98, member C
chr7	28867398	28868858	-	28867398	28867945	5pMXE	0.5	50	50	ENSMUST00000048923.7	ENSMUSG00000037239.9	Spred3	chr7	protein_coding	sprouty-related EVH1 domain containing 3
chr7	28869866	28870603	+	28869866	28870283	A3SS	0.33	50	50	ENSMUST00000098609.4	ENSMUSG00000031493.11	Ggn	chr7	protein_coding	gametogenetin
chr7	28869866	28872147	+	28869866	28870283	A3SS	0.33	50	50	ENSMUST00000098609.4	ENSMUSG00000031493.11	Ggn	chr7	protein_coding	gametogenetin
chr7	28869866	28870603	+	28869866	28872147	A3SS	0.33	50	50	ENSMUST00000033886.8	ENSMUSG00000031493.11	Ggn	chr7	protein_coding	gametogenetin
chr7	28871230	28872147	+	28869866	28872147	A5SS	0.5	50	50	ENSMUST00000033886.8	ENSMUSG00000031493.11	Ggn	chr7	protein_coding	gametogenetin
chr7	28869866	28872147	+	28869866;28871230	28870283;28872147	ES	0.5	50	50	ENSMUST00000208288.2	ENSMUSG00000031493.11	Ggn	chr7	protein_coding	gametogenetin
chr7	28870032	28870603	+	28869866	28870603	A5SS	0.5	50	50	ENSMUST00000209019.2	ENSMUSG00000031493.11	Ggn	chr7	protein_coding	gametogenetin
chr7	28894748	28895253	-	28894748;28894996	28894838;28895253	ES	0.25	50	50	ENSMUST00000166419.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28896689	28897774	-	28896689;28897645	28897538;28897774	ES	0.5	50	50	ENSMUST00000166419.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28897645	28899542	-	28897645;28897833	28897774;28899542	ES	0.5	50	50	ENSMUST00000166419.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28897833	28901689	-	28897833;28899679	28899542;28901689	ES	0.5	50	50	ENSMUST00000166419.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28908939	28909905	-	28906374	28909905	A3SS	0.33	50	50	ENSMUST00000166419.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28910180	28913341	-	28910350	28913341	A3SS	0.33	50	50	ENSMUST00000166419.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28910323	28913341	-	28910350	28913341	A3SS	0.33	50	50	ENSMUST00000166419.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28881754	28884389	-	28881754	28884104	A5SS	0.5	50	50	ENSMUST00000166419.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28889452	28889579	-	28889452	28889638	A5SS	0.5	50	50	ENSMUST00000166419.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28901860	28910172	-	28901860	28904192	A5SS&ES	0.25	50	50	ENSMUST00000166419.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28909958	28910172	-	28909958	28910067	A5SS	0.5	50	50	ENSMUST00000166419.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28910350	28910872	-	28910350	28913341	A5SS	0.5	50	50	ENSMUST00000166419.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28891173	28895253	-	28891173;28894748	28894639;28895253	ES	0.25	50	50	ENSMUST00000047846.13	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28910323	28913341	-	28910180	28913341	A3SS	0.33	50	50	ENSMUST00000085819.11	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28901860	28906230	-	28901860;28904347	28904192;28906230	ES	0.25	50	50	ENSMUST00000163782.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28890214;28891173	28890960;28895253	-	28890214	28895253	cassetteExon	0.5	100	100	ENSMUST00000163782.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28896689;28897645	28897538;28899542	-	28896689;28897833	28897774;28899542	MXE	0.5	100	100	ENSMUST00000163782.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28904347;28906105	28905754;28906230	-	28904347	28906230	cassetteExon	0.5	100	100	ENSMUST00000163782.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28894748	28895253	-	28890214	28895253	A3SS	0.25	50	50	ENSMUST00000163782.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28894996	28895253	-	28890214	28895253	A3SS	0.25	50	50	ENSMUST00000163782.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28891173;28894996	28894639;28895253	-	28891173	28895253	cassetteExon	0.5	100	100	ENSMUST00000164653.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28896689;28897833	28897774;28901689	-	28896689;28899679	28897538;28901689	MXE	0.5	100	100	ENSMUST00000164653.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28897645;28897833	28897774;28901689	-	28897645;28899679	28899542;28901689	MXE	0.5	100	100	ENSMUST00000164653.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28899679;28906374	28906230;28909905	-	28899679;28901860	28901689;28909905	MXE	0.5	100	100	ENSMUST00000164653.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28901860;28906374	28906230;28909905	-	28901860	28909905	cassetteExon	0.5	100	100	ENSMUST00000164653.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28908939	28909905	-	28901860	28909905	A3SS	0.33	50	50	ENSMUST00000164653.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28901860	28904192	-	28901860	28909905	A5SS	0.25	50	50	ENSMUST00000164653.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28901860	28910172	-	28901860	28909905	A5SS&ES	0.25	50	50	ENSMUST00000164653.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28899679	28906230	-	28899679	28901689	5pMXE	0.5	50	50	ENSMUST00000163445.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28897645;28899679	28899542;28906230	-	28897645;28901860	28897774;28906230	MXE	0.5	100	100	ENSMUST00000166654.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28897833;28899679	28899542;28906230	-	28897833;28901860	28901689;28906230	MXE	0.5	100	100	ENSMUST00000166654.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28906105	28906230	-	28901860	28906230	A3SS	0.25	50	50	ENSMUST00000166654.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28901860	28910172	-	28901860	28906230	A5SS&ES	0.25	50	50	ENSMUST00000166654.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28901860	28910172	-	28901860;28909958	28909905;28910172	ES	0.5	50	50	ENSMUST00000069861.4	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28897645	28899542	-	28897833	28899542	A3SS	0.5	50	50	ENSMUST00000069861.4	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28896689	28897774	-	28896689	28897538	A5SS	0.5	50	50	ENSMUST00000165907.8	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28899679;28901860	28901689;28906230	-	28899679	28906230	cassetteExon	0.5	100	100	ENSMUST00000163614.2	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28897833;28901860	28901689;28909905	-	28897833;28906374	28899542;28909905	MXE	0.5	100	100	ENSMUST00000163614.2	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28904347	28906230	-	28899679	28906230	A3SS	0.25	50	50	ENSMUST00000163614.2	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28906105	28906230	-	28899679	28906230	A3SS	0.25	50	50	ENSMUST00000163614.2	ENSMUSG00000049676.15	Catsperg1	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 1
chr7	28925292	28930666	-	28925292	28931587	A5SS	0.5	50	50	ENSMUST00000085818.6	ENSMUSG00000046410.11	Kcnk6	chr7	protein_coding	potassium inwardly-rectifying channel, subfamily K, member 6
chr7	28944264	28945326	+	28944264;28945246	28945091;28945326	ES	0.5	50	50	ENSMUST00000108238.8	ENSMUSG00000030588.13	Yif1b	chr7	protein_coding	Yip1 interacting factor homolog B (S. cerevisiae)
chr7	28937870	28943495	+	28937861	28943495	A5SS	0.2	50	50	ENSMUST00000108238.8	ENSMUSG00000030588.13	Yif1b	chr7	protein_coding	Yip1 interacting factor homolog B (S. cerevisiae)
chr7	28937988	28943495	+	28937861	28943495	A5SS	0.2	50	50	ENSMUST00000108238.8	ENSMUSG00000030588.13	Yif1b	chr7	protein_coding	Yip1 interacting factor homolog B (S. cerevisiae)
chr7	28938018	28943495	+	28937861	28943495	A5SS	0.2	50	50	ENSMUST00000108238.8	ENSMUSG00000030588.13	Yif1b	chr7	protein_coding	Yip1 interacting factor homolog B (S. cerevisiae)
chr7	28938036	28943495	+	28937861	28943495	A5SS	0.2	50	50	ENSMUST00000108238.8	ENSMUSG00000030588.13	Yif1b	chr7	protein_coding	Yip1 interacting factor homolog B (S. cerevisiae)
chr7	28937988	28943495	+	28937870	28943495	A5SS	0.2	50	50	ENSMUST00000032809.10	ENSMUSG00000030588.13	Yif1b	chr7	protein_coding	Yip1 interacting factor homolog B (S. cerevisiae)
chr7	28938018	28943495	+	28937870	28943495	A5SS	0.2	50	50	ENSMUST00000032809.10	ENSMUSG00000030588.13	Yif1b	chr7	protein_coding	Yip1 interacting factor homolog B (S. cerevisiae)
chr7	28938036	28943495	+	28937870	28943495	A5SS	0.2	50	50	ENSMUST00000032809.10	ENSMUSG00000030588.13	Yif1b	chr7	protein_coding	Yip1 interacting factor homolog B (S. cerevisiae)
chr7	28937988	28943495	+	28938036	28943495	A5SS	0.2	50	50	ENSMUST00000108237.2	ENSMUSG00000030588.13	Yif1b	chr7	protein_coding	Yip1 interacting factor homolog B (S. cerevisiae)
chr7	28938018	28943495	+	28938036	28943495	A5SS	0.2	50	50	ENSMUST00000108237.2	ENSMUSG00000030588.13	Yif1b	chr7	protein_coding	Yip1 interacting factor homolog B (S. cerevisiae)
chr7	28938018	28943495	+	28937988	28943495	A5SS	0.2	50	50	ENSMUST00000138128.3	ENSMUSG00000030588.13	Yif1b	chr7	protein_coding	Yip1 interacting factor homolog B (S. cerevisiae)
chr7	28958877	28959796	-	28958877;28959554	28959482;28959796	ES	0.5	50	50	ENSMUST00000207601.2	ENSMUSG00000074227.13	Spint2	chr7	protein_coding	serine protease inhibitor, Kunitz type 2
chr7	28959855;28963190	28963020;28980937	-	28959855	28980937	cassetteExon	0.5	100	100	ENSMUST00000207601.2	ENSMUSG00000074227.13	Spint2	chr7	protein_coding	serine protease inhibitor, Kunitz type 2
chr7	28991508	28992615	+	28991508	28991955	3pMXE	0.5	50	50	ENSMUST00000207714.2	ENSMUSG00000037166.6	Ppp1r14a	chr7	protein_coding	protein phosphatase 1, regulatory inhibitor subunit 14A
chr7	29010817	29012273	+	29010817;29011121	29011032;29012273	ES	0.5	50	50	ENSMUST00000108231.8	ENSMUSG00000030584.15	Dpf1	chr7	protein_coding	D4, zinc and double PHD fingers family 1
chr7	29012351	29013564	+	29012351;29012638	29012507;29013564	ES	0.5	50	50	ENSMUST00000108231.8	ENSMUSG00000030584.15	Dpf1	chr7	protein_coding	D4, zinc and double PHD fingers family 1
chr7	29012638	29013708	+	29012638;29013614	29013564;29013708	ES	0.5	50	50	ENSMUST00000108231.8	ENSMUSG00000030584.15	Dpf1	chr7	protein_coding	D4, zinc and double PHD fingers family 1
chr7	29015161	29015669	+	29015161	29015639	A3SS	0.5	50	50	ENSMUST00000108231.8	ENSMUSG00000030584.15	Dpf1	chr7	protein_coding	D4, zinc and double PHD fingers family 1
chr7	29007523	29008836	+	29003537	29008836	A5SS	0.33	50	50	ENSMUST00000108231.8	ENSMUSG00000030584.15	Dpf1	chr7	protein_coding	D4, zinc and double PHD fingers family 1
chr7	29008379	29008836	+	29003537	29008836	A5SS	0.33	50	50	ENSMUST00000108231.8	ENSMUSG00000030584.15	Dpf1	chr7	protein_coding	D4, zinc and double PHD fingers family 1
chr7	29012337	29012507	+	29012351	29012507	A5SS	0.5	50	50	ENSMUST00000108231.8	ENSMUSG00000030584.15	Dpf1	chr7	protein_coding	D4, zinc and double PHD fingers family 1
chr7	29012351;29012638	29012507;29013708	+	29012351;29013614	29013564;29013708	MXE	0.5	100	100	ENSMUST00000108230.8	ENSMUSG00000030584.15	Dpf1	chr7	protein_coding	D4, zinc and double PHD fingers family 1
chr7	29008379	29008836	+	29007523	29008836	A5SS	0.33	50	50	ENSMUST00000108230.8	ENSMUSG00000030584.15	Dpf1	chr7	protein_coding	D4, zinc and double PHD fingers family 1
chr7	29012638	29013708	+	29012638	29013564	A3SS	0.5	50	50	ENSMUST00000138993.8	ENSMUSG00000030584.15	Dpf1	chr7	protein_coding	D4, zinc and double PHD fingers family 1
chr7	29012351	29013564	+	29012638	29013564	A5SS&ES	0.5	50	50	ENSMUST00000138993.8	ENSMUSG00000030584.15	Dpf1	chr7	protein_coding	D4, zinc and double PHD fingers family 1
chr7	29012351	29013564	+	29012351	29012507	3pMXE	0.5	50	50	ENSMUST00000137848.2	ENSMUSG00000030584.15	Dpf1	chr7	protein_coding	D4, zinc and double PHD fingers family 1
chr7	29010817	29012273	+	29010817	29011032	3pMXE	0.5	50	50	ENSMUST00000126169.2	ENSMUSG00000030584.15	Dpf1	chr7	protein_coding	D4, zinc and double PHD fingers family 1
chr7	29021712	29025188	-	29021712;29023676	29023595;29025188	ES	0.5	50	50	ENSMUST00000183330.8	ENSMUSG00000030583.17	Sipa1l3	chr7	protein_coding	signal-induced proliferation-associated 1 like 3
chr7	29030969	29031650	-	29030969;29031468	29031373;29031650	ES	0.33	50	50	ENSMUST00000183330.8	ENSMUSG00000030583.17	Sipa1l3	chr7	protein_coding	signal-induced proliferation-associated 1 like 3
chr7	29053607;29063733	29063596;29065976	-	29053607	29065976	cassetteExon	0.5	100	100	ENSMUST00000183330.8	ENSMUSG00000030583.17	Sipa1l3	chr7	protein_coding	signal-induced proliferation-associated 1 like 3
chr7	29030966	29031650	-	29031468	29031650	A3SS&ES	0.33	50	50	ENSMUST00000183330.8	ENSMUSG00000030583.17	Sipa1l3	chr7	protein_coding	signal-induced proliferation-associated 1 like 3
chr7	29038602	29041244	-	29038602	29047697	A5SS	0.5	50	50	ENSMUST00000183330.8	ENSMUSG00000030583.17	Sipa1l3	chr7	protein_coding	signal-induced proliferation-associated 1 like 3
chr7	29066227	29066899	-	29066227	29070390	A5SS	0.33	50	50	ENSMUST00000183330.8	ENSMUSG00000030583.17	Sipa1l3	chr7	protein_coding	signal-induced proliferation-associated 1 like 3
chr7	29066227	29067049	-	29066227	29070390	A5SS	0.33	50	50	ENSMUST00000183330.8	ENSMUSG00000030583.17	Sipa1l3	chr7	protein_coding	signal-induced proliferation-associated 1 like 3
chr7	29030966	29031650	-	29030969	29031650	A3SS	0.33	50	50	ENSMUST00000182223.8	ENSMUSG00000030583.17	Sipa1l3	chr7	protein_coding	signal-induced proliferation-associated 1 like 3
chr7	29083796	29085481	-	29082778	29085481	A3SS	0.5	50	50	ENSMUST00000183096.8	ENSMUSG00000030583.17	Sipa1l3	chr7	protein_coding	signal-induced proliferation-associated 1 like 3
chr7	29134250	29187685	-	29134250	29203276	A5SS	0.33	50	50	ENSMUST00000183096.8	ENSMUSG00000030583.17	Sipa1l3	chr7	protein_coding	signal-induced proliferation-associated 1 like 3
chr7	29134250	29204719	-	29134250	29203276	A5SS&ES	0.33	50	50	ENSMUST00000183096.8	ENSMUSG00000030583.17	Sipa1l3	chr7	protein_coding	signal-induced proliferation-associated 1 like 3
chr7	29134250	29204719	-	29134250;29203340	29203276;29204719	ES	0.5	50	50	ENSMUST00000085809.11	ENSMUSG00000030583.17	Sipa1l3	chr7	protein_coding	signal-induced proliferation-associated 1 like 3
chr7	29203340	29217890	-	29203340	29204719	5pMXE	0.5	50	50	ENSMUST00000085809.11	ENSMUSG00000030583.17	Sipa1l3	chr7	protein_coding	signal-induced proliferation-associated 1 like 3
chr7	29066227	29066899	-	29066227	29067049	A5SS	0.33	50	50	ENSMUST00000182484.2	ENSMUSG00000030583.17	Sipa1l3	chr7	protein_coding	signal-induced proliferation-associated 1 like 3
chr7	29134250	29217890	-	29134250	29204719	5pMXE	0.25	50	50	ENSMUST00000182011.8	ENSMUSG00000030583.17	Sipa1l3	chr7	protein_coding	signal-induced proliferation-associated 1 like 3
chr7	29134250	29187685	-	29134250	29204719	A5SS	0.25	50	50	ENSMUST00000182011.8	ENSMUSG00000030583.17	Sipa1l3	chr7	protein_coding	signal-induced proliferation-associated 1 like 3
chr7	29134250	29217890	-	29134250;29187749	29187685;29217890	ES	0.2	50	50	ENSMUST00000181975.8	ENSMUSG00000030583.17	Sipa1l3	chr7	protein_coding	signal-induced proliferation-associated 1 like 3
chr7	29134250;29203340	29203276;29217890	-	29134250;29187749	29187685;29217890	MXE	0.5	100	100	ENSMUST00000181975.8	ENSMUSG00000030583.17	Sipa1l3	chr7	protein_coding	signal-induced proliferation-associated 1 like 3
chr7	29194506	29217890	-	29187749	29217890	A3SS	0.2	50	50	ENSMUST00000181975.8	ENSMUSG00000030583.17	Sipa1l3	chr7	protein_coding	signal-induced proliferation-associated 1 like 3
chr7	29216358	29217890	-	29187749	29217890	A3SS	0.2	50	50	ENSMUST00000181975.8	ENSMUSG00000030583.17	Sipa1l3	chr7	protein_coding	signal-induced proliferation-associated 1 like 3
chr7	29134250;29203340	29203276;29217890	-	29134250	29217890	cassetteExon	0.5	100	100	ENSMUST00000182702.8	ENSMUSG00000030583.17	Sipa1l3	chr7	protein_coding	signal-induced proliferation-associated 1 like 3
chr7	29194506	29217890	-	29134250	29217890	A3SS	0.2	50	50	ENSMUST00000182702.8	ENSMUSG00000030583.17	Sipa1l3	chr7	protein_coding	signal-induced proliferation-associated 1 like 3
chr7	29216358	29217890	-	29134250	29217890	A3SS	0.2	50	50	ENSMUST00000182702.8	ENSMUSG00000030583.17	Sipa1l3	chr7	protein_coding	signal-induced proliferation-associated 1 like 3
chr7	29194506	29217890	-	29203340	29217890	A3SS&ES	0.2	50	50	ENSMUST00000182236.2	ENSMUSG00000030583.17	Sipa1l3	chr7	protein_coding	signal-induced proliferation-associated 1 like 3
chr7	29216358	29217890	-	29203340	29217890	A3SS	0.2	50	50	ENSMUST00000182236.2	ENSMUSG00000030583.17	Sipa1l3	chr7	protein_coding	signal-induced proliferation-associated 1 like 3
chr7	29216358	29217890	-	29194506	29217890	A3SS	0.2	50	50	ENSMUST00000183081.2	ENSMUSG00000030583.17	Sipa1l3	chr7	protein_coding	signal-induced proliferation-associated 1 like 3
chr7	29409341	29409848	-	29409341;29409592	29409434;29409848	ES	0.33	50	50	ENSMUST00000208607.2	ENSMUSG00000049123.11	Catsperg2	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 2
chr7	29411303	29412391	-	29411303;29412259	29412152;29412391	ES	0.5	50	50	ENSMUST00000208607.2	ENSMUSG00000049123.11	Catsperg2	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 2
chr7	29412450	29416411	-	29412450;29414403	29414266;29416411	ES	0.5	50	50	ENSMUST00000208607.2	ENSMUSG00000049123.11	Catsperg2	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 2
chr7	29423671	29424460	-	29421087	29424460	A3SS	0.33	50	50	ENSMUST00000208607.2	ENSMUSG00000049123.11	Catsperg2	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 2
chr7	29424735	29426353	-	29424905	29426353	A3SS	0.33	50	50	ENSMUST00000208607.2	ENSMUSG00000049123.11	Catsperg2	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 2
chr7	29424878	29426353	-	29424905	29426353	A3SS	0.33	50	50	ENSMUST00000208607.2	ENSMUSG00000049123.11	Catsperg2	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 2
chr7	29397703	29400015	-	29397703	29399730	A5SS	0.5	50	50	ENSMUST00000208607.2	ENSMUSG00000049123.11	Catsperg2	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 2
chr7	29416582	29424727	-	29416582	29418857	A5SS&ES	0.25	50	50	ENSMUST00000208607.2	ENSMUSG00000049123.11	Catsperg2	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 2
chr7	29424513	29424727	-	29424513	29424622	A5SS	0.5	50	50	ENSMUST00000208607.2	ENSMUSG00000049123.11	Catsperg2	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 2
chr7	29416582	29420943	-	29416582;29419012	29418857;29420943	ES	0.33	50	50	ENSMUST00000208371.2	ENSMUSG00000049123.11	Catsperg2	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 2
chr7	29419012;29420818	29420467;29420943	-	29419012	29420943	cassetteExon	0.5	100	100	ENSMUST00000208371.2	ENSMUSG00000049123.11	Catsperg2	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 2
chr7	29409341	29409848	-	29405070	29409848	A3SS	0.33	50	50	ENSMUST00000208371.2	ENSMUSG00000049123.11	Catsperg2	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 2
chr7	29409592	29409848	-	29405070	29409848	A3SS	0.33	50	50	ENSMUST00000208371.2	ENSMUSG00000049123.11	Catsperg2	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 2
chr7	29405070	29405815	-	29405070	29409848	A5SS	0.5	50	50	ENSMUST00000208371.2	ENSMUSG00000049123.11	Catsperg2	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 2
chr7	29424878	29426353	-	29424735	29426353	A3SS	0.33	50	50	ENSMUST00000207115.2	ENSMUSG00000049123.11	Catsperg2	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 2
chr7	29416582	29424460	-	29416582;29421087	29420943;29424460	ES	0.33	50	50	ENSMUST00000207483.2	ENSMUSG00000049123.11	Catsperg2	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 2
chr7	29420818	29420943	-	29416582	29420943	A3SS	0.33	50	50	ENSMUST00000207483.2	ENSMUSG00000049123.11	Catsperg2	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 2
chr7	29416582	29424727	-	29416582	29420943	A5SS&ES	0.25	50	50	ENSMUST00000207483.2	ENSMUSG00000049123.11	Catsperg2	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 2
chr7	29416582	29424727	-	29416582;29424513	29424460;29424727	ES	0.5	50	50	ENSMUST00000207251.2	ENSMUSG00000049123.11	Catsperg2	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 2
chr7	29423671	29424460	-	29416582	29424460	A3SS	0.33	50	50	ENSMUST00000207251.2	ENSMUSG00000049123.11	Catsperg2	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 2
chr7	29416582	29418857	-	29416582	29424460	A5SS	0.25	50	50	ENSMUST00000207251.2	ENSMUSG00000049123.11	Catsperg2	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 2
chr7	29411303	29412391	-	29411303	29412152	A5SS	0.5	50	50	ENSMUST00000208345.2	ENSMUSG00000049123.11	Catsperg2	chr7	protein_coding	cation channel sperm associated auxiliary subunit gamma 2
chr7	29484326	29485600	+	29484326	29485644	A3SS	0.5	50	50	ENSMUST00000032803.12	ENSMUSG00000047473.15	Zfp30	chr7	protein_coding	zinc finger protein 30
chr7	29485728	29488766	+	29485728	29487474	A3SS&ES	0.5	50	50	ENSMUST00000032803.12	ENSMUSG00000047473.15	Zfp30	chr7	protein_coding	zinc finger protein 30
chr7	29487600	29488766	+	29487600	29488763	A3SS	0.5	50	50	ENSMUST00000032803.12	ENSMUSG00000047473.15	Zfp30	chr7	protein_coding	zinc finger protein 30
chr7	29485728	29488766	+	29485728;29487600	29487474;29488766	ES	0.5	50	50	ENSMUST00000126504.2	ENSMUSG00000047473.15	Zfp30	chr7	protein_coding	zinc finger protein 30
chr7	29515714	29522405	+	29515714	29522495	A3SS	0.5	50	50	ENSMUST00000178162.3	ENSMUSG00000011427.17	Zfp790	chr7	protein_coding	zinc finger protein 790
chr7	29518623	29522405	+	29515714	29522405	A5SS	0.5	50	50	ENSMUST00000032796.14	ENSMUSG00000011427.17	Zfp790	chr7	protein_coding	zinc finger protein 790
chr7	29545989	29546259	-	29535228	29546259	A3SS	0.5	50	50	ENSMUST00000108223.8	ENSMUSG00000050855.17	Zfp940	chr7	protein_coding	zinc finger protein 940
chr7	29550442	29552702	-	29550442	29552922	A5SS	0.5	50	50	ENSMUST00000108223.8	ENSMUSG00000050855.17	Zfp940	chr7	protein_coding	zinc finger protein 940
chr7	29559518	29572317	+	29559518;29560493	29560441;29572317	ES	0.5	50	50	ENSMUST00000074876.13	ENSMUSG00000058402.15	Zfp420	chr7	protein_coding	zinc finger protein 420
chr7	29559518	29573819	+	29559518	29560441	A3SS&ES	0.33	50	50	ENSMUST00000074876.13	ENSMUSG00000058402.15	Zfp420	chr7	protein_coding	zinc finger protein 420
chr7	29559518	29572317	+	29559518	29560441	3pMXE	0.33	50	50	ENSMUST00000148489.3	ENSMUSG00000058402.15	Zfp420	chr7	protein_coding	zinc finger protein 420
chr7	29559518	29572317	+	29559518	29573819	A3SS	0.33	50	50	ENSMUST00000145952.2	ENSMUSG00000058402.15	Zfp420	chr7	protein_coding	zinc finger protein 420
chr7	29603484	29605479	-	29603484	29605635	A5SS	0.33	50	50	ENSMUST00000162592.8	ENSMUSG00000062040.15	Zfp27	chr7	protein_coding	zinc finger protein 27
chr7	29603484	29605676	-	29603484	29605635	A5SS	0.33	50	50	ENSMUST00000162592.8	ENSMUSG00000062040.15	Zfp27	chr7	protein_coding	zinc finger protein 27
chr7	29603484	29605676	-	29603484	29605479	5pMXE	0.33	50	50	ENSMUST00000053521.15	ENSMUSG00000062040.15	Zfp27	chr7	protein_coding	zinc finger protein 27
chr7	29637493	29653280	-	29637493;29642970	29642916;29653280	ES	0.5	50	50	ENSMUST00000108211.8	ENSMUSG00000059975.16	Zfp74	chr7	protein_coding	zinc finger protein 74
chr7	29642970	29651139	-	29642970	29653280	A5SS	0.5	50	50	ENSMUST00000108211.8	ENSMUSG00000059975.16	Zfp74	chr7	protein_coding	zinc finger protein 74
chr7	29637493	29653280	-	29637493	29642916	5pMXE	0.5	50	50	ENSMUST00000032797.9	ENSMUSG00000059975.16	Zfp74	chr7	protein_coding	zinc finger protein 74
chr7	29653381	29660318	+	29653381;29656459	29656385;29660318	ES	0.5	50	50	ENSMUST00000239012.2	ENSMUSG00000063623.5	C230062I16Rik	chr7	transcribed_unprocessed_pseudogene	RIKEN cDNA C230062I16 gene
chr7	29656459	29662571	+	29656459;29660444	29660318;29662571	ES	0.5	50	50	ENSMUST00000239012.2	ENSMUSG00000063623.5	C230062I16Rik	chr7	transcribed_unprocessed_pseudogene	RIKEN cDNA C230062I16 gene
chr7	29662666	29667590	+	29662666	29664557	3pMXE	0.33	50	50	ENSMUST00000239012.2	ENSMUSG00000063623.5	C230062I16Rik	chr7	transcribed_unprocessed_pseudogene	RIKEN cDNA C230062I16 gene
chr7	29662666	29667655	+	29662666	29664557	3pMXE	0.33	50	50	ENSMUST00000239012.2	ENSMUSG00000063623.5	C230062I16Rik	chr7	transcribed_unprocessed_pseudogene	RIKEN cDNA C230062I16 gene
chr7	29656011	29656385	+	29653381	29656385	A5SS	0.33	50	50	ENSMUST00000239012.2	ENSMUSG00000063623.5	C230062I16Rik	chr7	transcribed_unprocessed_pseudogene	RIKEN cDNA C230062I16 gene
chr7	29656142	29656385	+	29653381	29656385	A5SS	0.33	50	50	ENSMUST00000239012.2	ENSMUSG00000063623.5	C230062I16Rik	chr7	transcribed_unprocessed_pseudogene	RIKEN cDNA C230062I16 gene
chr7	29653381;29656459	29656385;29662571	+	29653381;29660444	29660318;29662571	MXE	0.5	100	100	ENSMUST00000207746.3	ENSMUSG00000063623.5	C230062I16Rik	chr7	transcribed_unprocessed_pseudogene	RIKEN cDNA C230062I16 gene
chr7	29656142	29656385	+	29656011	29656385	A5SS	0.33	50	50	ENSMUST00000208342.2	ENSMUSG00000063623.5	C230062I16Rik	chr7	transcribed_unprocessed_pseudogene	RIKEN cDNA C230062I16 gene
chr7	29662666	29667655	+	29662666	29667590	A3SS	0.33	50	50	ENSMUST00000239047.2	ENSMUSG00000063623.5	C230062I16Rik	chr7	transcribed_unprocessed_pseudogene	RIKEN cDNA C230062I16 gene
chr7	29653381	29660318	+	29656459	29660318	5pMXE	0.5	50	50	ENSMUST00000238888.2	ENSMUSG00000063623.5	C230062I16Rik	chr7	transcribed_unprocessed_pseudogene	RIKEN cDNA C230062I16 gene
chr7	29684751	29687007	+	29684751	29687014	A3SS	0.5	50	50	ENSMUST00000148442.8	ENSMUSG00000074221.13	Zfp568	chr7	protein_coding	zinc finger protein 568
chr7	29697635	29713268	+	29697635	29713265	A3SS	0.5	50	50	ENSMUST00000148442.8	ENSMUSG00000074221.13	Zfp568	chr7	protein_coding	zinc finger protein 568
chr7	29683807	29684685	+	29683653	29684685	A5SS	0.5	50	50	ENSMUST00000148442.8	ENSMUSG00000074221.13	Zfp568	chr7	protein_coding	zinc finger protein 568
chr7	29744233;29749928	29749865;29750770	-	29744233;29745264	29745164;29750770	MXE	0.5	100	100	ENSMUST00000207873.2	ENSMUSG00000053985.11	Zfp14	chr7	protein_coding	zinc finger protein 14
chr7	29756944	29761654	-	29756944	29758701	5pMXE	0.25	50	50	ENSMUST00000182483.2	ENSMUSG00000098022.8	Zfp82	chr7	protein_coding	zinc finger protein 82
chr7	29756944	29765666	-	29756944	29758701	5pMXE	0.25	50	50	ENSMUST00000182483.2	ENSMUSG00000098022.8	Zfp82	chr7	protein_coding	zinc finger protein 82
chr7	29756944	29767490	-	29756944	29758701	5pMXE	0.25	50	50	ENSMUST00000182483.2	ENSMUSG00000098022.8	Zfp82	chr7	protein_coding	zinc finger protein 82
chr7	29756944	29765666	-	29756944;29761743	29761654;29765666	ES	0.5	50	50	ENSMUST00000080834.15	ENSMUSG00000098022.8	Zfp82	chr7	protein_coding	zinc finger protein 82
chr7	29761743	29767490	-	29761743;29765792	29765666;29767490	ES	0.33	50	50	ENSMUST00000080834.15	ENSMUSG00000098022.8	Zfp82	chr7	protein_coding	zinc finger protein 82
chr7	29771564	29780516	-	29771564	29772206	5pMXE	0.5	50	50	ENSMUST00000080834.15	ENSMUSG00000098022.8	Zfp82	chr7	protein_coding	zinc finger protein 82
chr7	29759954	29761654	-	29756944	29761654	A3SS	0.5	50	50	ENSMUST00000080834.15	ENSMUSG00000098022.8	Zfp82	chr7	protein_coding	zinc finger protein 82
chr7	29756944	29767490	-	29756944;29765792	29765666;29767490	ES	0.33	50	50	ENSMUST00000182546.8	ENSMUSG00000098022.8	Zfp82	chr7	protein_coding	zinc finger protein 82
chr7	29756944;29761743	29761654;29767490	-	29756944;29765792	29765666;29767490	MXE	0.5	100	100	ENSMUST00000182546.8	ENSMUSG00000098022.8	Zfp82	chr7	protein_coding	zinc finger protein 82
chr7	29756944;29761743	29761654;29767490	-	29756944	29767490	cassetteExon	0.5	100	100	ENSMUST00000183115.8	ENSMUSG00000098022.8	Zfp82	chr7	protein_coding	zinc finger protein 82
chr7	29778043	29780516	-	29771564	29780516	A3SS	0.5	50	50	ENSMUST00000182746.2	ENSMUSG00000058447.9	Gm26920	chr7	protein_coding	predicted gene, 26920
chr7	29799147	29803658	+	29799147	29803655	A3SS	0.5	50	50	ENSMUST00000123095.8	ENSMUSG00000049421.14	Zfp260	chr7	protein_coding	zinc finger protein 260
chr7	29794636	29798953	+	29794307	29798953	A5SS	0.5	50	50	ENSMUST00000123095.8	ENSMUSG00000049421.14	Zfp260	chr7	protein_coding	zinc finger protein 260
chr7	29794636	29803655	+	29799147	29803655	A5SS&ES	0.5	50	50	ENSMUST00000123095.8	ENSMUSG00000049421.14	Zfp260	chr7	protein_coding	zinc finger protein 260
chr7	29794636	29803655	+	29794636;29799147	29798953;29803655	ES	0.5	50	50	ENSMUST00000050735.12	ENSMUSG00000049421.14	Zfp260	chr7	protein_coding	zinc finger protein 260
chr7	29794636	29803655	+	29794636	29798953	3pMXE	0.5	50	50	ENSMUST00000149302.2	ENSMUSG00000049421.14	Zfp260	chr7	protein_coding	zinc finger protein 260
chr7	29825266	29830098	+	29825266	29830126	A3SS	0.5	50	50	ENSMUST00000098596.11	ENSMUSG00000074220.11	Zfp382	chr7	protein_coding	zinc finger protein 382
chr7	29862653;29862798	29862752;29869084	-	29862653	29869084	cassetteExon	0.5	100	100	ENSMUST00000062181.9	ENSMUSG00000037029.9	Zfp146	chr7	protein_coding	zinc finger protein 146
chr7	29883764	29884510	+	29883670	29884510	A5SS	0.5	50	50	ENSMUST00000098594.4	ENSMUSG00000074218.4	Cox7a1	chr7	protein_coding	cytochrome c oxidase subunit 7A1
chr7	29892325	29892455	-	29892325	29893303	A5SS	0.33	50	50	ENSMUST00000001845.13	ENSMUSG00000001794.14	Capns1	chr7	protein_coding	calpain, small subunit 1
chr7	29892325	29892672	-	29892325	29893303	A5SS	0.33	50	50	ENSMUST00000001845.13	ENSMUSG00000001794.14	Capns1	chr7	protein_coding	calpain, small subunit 1
chr7	29892325	29892672	-	29892325	29892455	5pMXE	0.33	50	50	ENSMUST00000108196.8	ENSMUSG00000001794.14	Capns1	chr7	protein_coding	calpain, small subunit 1
chr7	29898447	29899602	+	29893528	29899602	A5SS	0.5	50	50	ENSMUST00000208688.2	ENSMUSG00000097817.3	Gm26810	chr7	lncRNA	predicted gene, 26810
chr7	29923970	29926318	-	29923970	29926269	A5SS	0.5	50	50	ENSMUST00000006254.6	ENSMUSG00000006095.13	Tbcb	chr7	protein_coding	tubulin folding cofactor B
chr7	29931961	29932117	+	29931961	29932175	A3SS	0.5	50	50	ENSMUST00000019882.16	ENSMUSG00000019738.16	Polr2i	chr7	protein_coding	polymerase (RNA) II (DNA directed) polypeptide I
chr7	29931803	29931907	+	29931829	29931907	A5SS	0.5	50	50	ENSMUST00000019882.16	ENSMUSG00000019738.16	Polr2i	chr7	protein_coding	polymerase (RNA) II (DNA directed) polypeptide I
chr7	29943385;29943963	29943898;29944712	-	29943385	29944712	cassetteExon	0.5	100	100	ENSMUST00000134570.8	ENSMUSG00000037020.17	Wdr62	chr7	protein_coding	WD repeat domain 62
chr7	29941309	29941439	-	29941252	29941439	A3SS	0.5	50	50	ENSMUST00000134570.8	ENSMUSG00000037020.17	Wdr62	chr7	protein_coding	WD repeat domain 62
chr7	29942360	29942468	-	29942302	29942468	A3SS	0.5	50	50	ENSMUST00000134570.8	ENSMUSG00000037020.17	Wdr62	chr7	protein_coding	WD repeat domain 62
chr7	29942302	29942459	-	29942302	29942468	A5SS	0.5	50	50	ENSMUST00000134570.8	ENSMUSG00000037020.17	Wdr62	chr7	protein_coding	WD repeat domain 62
chr7	29949337	29949509	-	29949337	29950103	A5SS	0.5	50	50	ENSMUST00000134570.8	ENSMUSG00000037020.17	Wdr62	chr7	protein_coding	WD repeat domain 62
chr7	29991267	29991567	+	29991267	29991580	A3SS	0.33	50	50	ENSMUST00000145253.2	ENSMUSG00000013921.16	Clip3	chr7	protein_coding	CAP-GLY domain containing linker protein 3
chr7	29991267	29991603	+	29991267	29991580	A3SS	0.33	50	50	ENSMUST00000145253.2	ENSMUSG00000013921.16	Clip3	chr7	protein_coding	CAP-GLY domain containing linker protein 3
chr7	29991267	29991567	+	29991267	29991603	A3SS	0.33	50	50	ENSMUST00000126216.2	ENSMUSG00000013921.16	Clip3	chr7	protein_coding	CAP-GLY domain containing linker protein 3
chr7	30012132;30013023	30012898;30013344	+	30012132	30013344	cassetteExon	0.5	100	100	ENSMUST00000060834.12	ENSMUSG00000042831.14	Alkbh6	chr7	protein_coding	alkB homolog 6
chr7	30008984	30009453	+	30008984	30009411	A3SS	0.5	50	50	ENSMUST00000060834.12	ENSMUSG00000042831.14	Alkbh6	chr7	protein_coding	alkB homolog 6
chr7	30009479	30010219	+	30009479	30011265	A3SS	0.5	50	50	ENSMUST00000060834.12	ENSMUSG00000042831.14	Alkbh6	chr7	protein_coding	alkB homolog 6
chr7	30011813	30011931	+	30011813	30012016	A3SS	0.5	50	50	ENSMUST00000060834.12	ENSMUSG00000042831.14	Alkbh6	chr7	protein_coding	alkB homolog 6
chr7	30008359	30008906	+	30008259	30008906	A5SS	0.5	50	50	ENSMUST00000060834.12	ENSMUSG00000042831.14	Alkbh6	chr7	protein_coding	alkB homolog 6
chr7	30014825	30015998	+	30014825;30015798	30015720;30015998	ES	0.5	50	50	ENSMUST00000176253.8	ENSMUSG00000019737.15	Syne4	chr7	protein_coding	spectrin repeat containing, nuclear envelope family member 4
chr7	30014825	30015655	+	30014825	30015720	A3SS	0.25	50	50	ENSMUST00000176253.8	ENSMUSG00000019737.15	Syne4	chr7	protein_coding	spectrin repeat containing, nuclear envelope family member 4
chr7	30014825	30015739	+	30014825	30015720	A3SS	0.25	50	50	ENSMUST00000176253.8	ENSMUSG00000019737.15	Syne4	chr7	protein_coding	spectrin repeat containing, nuclear envelope family member 4
chr7	30014825	30015998	+	30014825;30015798	30015655;30015998	ES	0.5	50	50	ENSMUST00000054594.15	ENSMUSG00000019737.15	Syne4	chr7	protein_coding	spectrin repeat containing, nuclear envelope family member 4
chr7	30016192	30017393	+	30016192;30016516	30016268;30017393	ES	0.25	50	50	ENSMUST00000054594.15	ENSMUSG00000019737.15	Syne4	chr7	protein_coding	spectrin repeat containing, nuclear envelope family member 4
chr7	30014825	30015739	+	30014825	30015655	A3SS	0.25	50	50	ENSMUST00000054594.15	ENSMUSG00000019737.15	Syne4	chr7	protein_coding	spectrin repeat containing, nuclear envelope family member 4
chr7	30017467	30018103	+	30017467	30018098	A3SS	0.5	50	50	ENSMUST00000054594.15	ENSMUSG00000019737.15	Syne4	chr7	protein_coding	spectrin repeat containing, nuclear envelope family member 4
chr7	30016566	30017393	+	30016516	30017393	A5SS	0.25	50	50	ENSMUST00000054594.15	ENSMUSG00000019737.15	Syne4	chr7	protein_coding	spectrin repeat containing, nuclear envelope family member 4
chr7	30016587	30017393	+	30016516	30017393	A5SS	0.25	50	50	ENSMUST00000054594.15	ENSMUSG00000019737.15	Syne4	chr7	protein_coding	spectrin repeat containing, nuclear envelope family member 4
chr7	30016192	30017393	+	30016192	30016268	3pMXE	0.5	50	50	ENSMUST00000177078.8	ENSMUSG00000019737.15	Syne4	chr7	protein_coding	spectrin repeat containing, nuclear envelope family member 4
chr7	30014825;30015798	30015739;30015998	+	30014825	30015998	cassetteExon	0.5	100	100	ENSMUST00000177078.8	ENSMUSG00000019737.15	Syne4	chr7	protein_coding	spectrin repeat containing, nuclear envelope family member 4
chr7	30016192;30016566	30016268;30017393	+	30016192	30017393	cassetteExon	0.5	100	100	ENSMUST00000176304.8	ENSMUSG00000019737.15	Syne4	chr7	protein_coding	spectrin repeat containing, nuclear envelope family member 4
chr7	30016192;30016587	30016268;30017393	+	30016192	30017393	cassetteExon	0.5	100	100	ENSMUST00000176304.8	ENSMUSG00000019737.15	Syne4	chr7	protein_coding	spectrin repeat containing, nuclear envelope family member 4
chr7	30014825	30015998	+	30014825	30015655	3pMXE	0.25	50	50	ENSMUST00000175672.2	ENSMUSG00000019737.15	Syne4	chr7	protein_coding	spectrin repeat containing, nuclear envelope family member 4
chr7	30014825	30015998	+	30015798	30015998	5pMXE	0.5	50	50	ENSMUST00000176984.2	ENSMUSG00000019737.15	Syne4	chr7	protein_coding	spectrin repeat containing, nuclear envelope family member 4
chr7	30016192	30017393	+	30016516	30017393	5pMXE	0.25	50	50	ENSMUST00000175902.2	ENSMUSG00000019737.15	Syne4	chr7	protein_coding	spectrin repeat containing, nuclear envelope family member 4
chr7	30016192	30017393	+	30016566	30017393	5pMXE	0.25	50	50	ENSMUST00000176232.8	ENSMUSG00000019737.15	Syne4	chr7	protein_coding	spectrin repeat containing, nuclear envelope family member 4
chr7	30016587	30017393	+	30016566	30017393	A5SS	0.25	50	50	ENSMUST00000176232.8	ENSMUSG00000019737.15	Syne4	chr7	protein_coding	spectrin repeat containing, nuclear envelope family member 4
chr7	30016192	30017393	+	30016587	30017393	5pMXE	0.25	50	50	ENSMUST00000177257.8	ENSMUSG00000019737.15	Syne4	chr7	protein_coding	spectrin repeat containing, nuclear envelope family member 4
chr7	30114075;30114499	30114433;30115057	+	30114075	30115057	cassetteExon	0.5	100	100	ENSMUST00000207982.2	ENSMUSG00000030579.11	Tyrobp	chr7	protein_coding	TYRO protein tyrosine kinase binding protein
chr7	30117644;30118067	30118044;30119129	-	30117644	30119129	cassetteExon	0.5	100	100	ENSMUST00000208740.2	ENSMUSG00000064109.9	Hcst	chr7	protein_coding	hematopoietic cell signal transducer
chr7	30117644	30119129	-	30118067	30119129	3pMXE	0.5	50	50	ENSMUST00000207504.2	ENSMUSG00000064109.9	Hcst	chr7	protein_coding	hematopoietic cell signal transducer
chr7	30121920	30122828	+	30121259	30122828	A5SS	0.5	50	50	ENSMUST00000108176.9	ENSMUSG00000036931.16	Nfkbid	chr7	protein_coding	nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, delta
chr7	30149864	30150227	-	30149903	30150227	A3SS	0.5	50	50	ENSMUST00000140565.2	ENSMUSG00000036915.18	Kirrel2	chr7	protein_coding	kirre like nephrin family adhesion molecule 2
chr7	30154700	30154890	-	30154757	30154890	A3SS	0.5	50	50	ENSMUST00000140565.2	ENSMUSG00000036915.18	Kirrel2	chr7	protein_coding	kirre like nephrin family adhesion molecule 2
chr7	30177340;30177784	30177723;30180806	+	30177340	30180806	cassetteExon	0.5	100	100	ENSMUST00000126297.9	ENSMUSG00000006649.18	Nphs1	chr7	protein_coding	nephrosis 1, nephrin
chr7	30159668	30159749	+	30157945	30159749	A5SS	0.5	50	50	ENSMUST00000126297.9	ENSMUSG00000006649.18	Nphs1	chr7	protein_coding	nephrosis 1, nephrin
chr7	30210648;30211894	30211737;30212235	+	30210648	30212235	cassetteExon	0.5	100	100	ENSMUST00000058280.13	ENSMUSG00000036892.13	Prodh2	chr7	protein_coding	proline dehydrogenase (oxidase) 2
chr7	30193282	30193363	+	30193282	30193357	A3SS	0.5	50	50	ENSMUST00000058280.13	ENSMUSG00000036892.13	Prodh2	chr7	protein_coding	proline dehydrogenase (oxidase) 2
chr7	30193553	30193720	+	30193553	30193637	A3SS	0.33	50	50	ENSMUST00000058280.13	ENSMUSG00000036892.13	Prodh2	chr7	protein_coding	proline dehydrogenase (oxidase) 2
chr7	30193553	30193724	+	30193553	30193637	A3SS	0.33	50	50	ENSMUST00000058280.13	ENSMUSG00000036892.13	Prodh2	chr7	protein_coding	proline dehydrogenase (oxidase) 2
chr7	30206202	30207821	+	30206202	30209192	A3SS	0.5	50	50	ENSMUST00000058280.13	ENSMUSG00000036892.13	Prodh2	chr7	protein_coding	proline dehydrogenase (oxidase) 2
chr7	30193157	30193357	+	30193282	30193357	A5SS	0.5	50	50	ENSMUST00000058280.13	ENSMUSG00000036892.13	Prodh2	chr7	protein_coding	proline dehydrogenase (oxidase) 2
chr7	30193553	30193724	+	30193553	30193720	A3SS	0.33	50	50	ENSMUST00000130839.8	ENSMUSG00000036892.13	Prodh2	chr7	protein_coding	proline dehydrogenase (oxidase) 2
chr7	30215262	30217807	+	30214626	30217807	A5SS	0.5	50	50	ENSMUST00000124276.2	ENSMUSG00000062132.11	Arhgap33os	chr7	protein_coding	Rho GTPase activating protein 33, opposite strand
chr7	30217921	30218161	+	30217925	30218161	A5SS	0.5	50	50	ENSMUST00000124276.2	ENSMUSG00000062132.11	Arhgap33os	chr7	protein_coding	Rho GTPase activating protein 33, opposite strand
chr7	30219085	30219492	+	30219128	30219492	A5SS	0.5	50	50	ENSMUST00000124276.2	ENSMUSG00000062132.11	Arhgap33os	chr7	protein_coding	Rho GTPase activating protein 33, opposite strand
chr7	30232457	30234351	-	30232457	30233528	5pMXE	0.5	50	50	ENSMUST00000044338.5	ENSMUSG00000036882.8	Arhgap33	chr7	protein_coding	Rho GTPase activating protein 33
chr7	30232457	30234351	-	30232457;30233637	30233528;30234351	ES	0.33	50	50	ENSMUST00000207860.2	ENSMUSG00000036882.8	Arhgap33	chr7	protein_coding	Rho GTPase activating protein 33
chr7	30233610	30234351	-	30233637	30234351	A3SS	0.33	50	50	ENSMUST00000207860.2	ENSMUSG00000036882.8	Arhgap33	chr7	protein_coding	Rho GTPase activating protein 33
chr7	30232457	30234351	-	30232457;30233610	30233528;30234351	ES	0.33	50	50	ENSMUST00000208538.2	ENSMUSG00000036882.8	Arhgap33	chr7	protein_coding	Rho GTPase activating protein 33
chr7	30249128	30251633	-	30249128;30250259	30250183;30251633	ES	0.5	50	50	ENSMUST00000215288.2	ENSMUSG00000036864.17	Proser3	chr7	protein_coding	proline and serine rich 3
chr7	30239003	30239174	-	30239007	30239174	A3SS	0.5	50	50	ENSMUST00000215288.2	ENSMUSG00000036864.17	Proser3	chr7	protein_coding	proline and serine rich 3
chr7	30245653	30245728	-	30245650	30245728	A3SS	0.5	50	50	ENSMUST00000215288.2	ENSMUSG00000036864.17	Proser3	chr7	protein_coding	proline and serine rich 3
chr7	30252152	30253687	+	30252487	30253687	A5SS	0.25	50	50	ENSMUST00000126989.8	ENSMUSG00000036854.15	Hspb6	chr7	protein_coding	heat shock protein, alpha-crystallin-related, B6
chr7	30252957	30253687	+	30252487	30253687	A5SS	0.25	50	50	ENSMUST00000126989.8	ENSMUSG00000036854.15	Hspb6	chr7	protein_coding	heat shock protein, alpha-crystallin-related, B6
chr7	30253360	30253687	+	30252487	30253687	A5SS	0.25	50	50	ENSMUST00000126989.8	ENSMUSG00000036854.15	Hspb6	chr7	protein_coding	heat shock protein, alpha-crystallin-related, B6
chr7	30252957	30253687	+	30252152	30253687	A5SS	0.25	50	50	ENSMUST00000123355.8	ENSMUSG00000036854.15	Hspb6	chr7	protein_coding	heat shock protein, alpha-crystallin-related, B6
chr7	30253360	30253687	+	30252152	30253687	A5SS	0.25	50	50	ENSMUST00000123355.8	ENSMUSG00000036854.15	Hspb6	chr7	protein_coding	heat shock protein, alpha-crystallin-related, B6
chr7	30253360	30253687	+	30252957	30253687	A5SS	0.25	50	50	ENSMUST00000044048.8	ENSMUSG00000036854.15	Hspb6	chr7	protein_coding	heat shock protein, alpha-crystallin-related, B6
chr7	30257509	30258867	-	30257383	30258867	A3SS	0.5	50	50	ENSMUST00000043975.11	ENSMUSG00000036845.13	Lin37	chr7	protein_coding	lin-37 homolog (C. elegans)
chr7	30257101	30257275	-	30257101	30257308	A5SS	0.5	50	50	ENSMUST00000043975.11	ENSMUSG00000036845.13	Lin37	chr7	protein_coding	lin-37 homolog (C. elegans)
chr7	30261559	30262221	-	30261559;30261853	30261749;30262221	ES	0.5	50	50	ENSMUST00000207747.2	ENSMUSG00000036835.8	Psenen	chr7	protein_coding	presenilin enhancer gamma secretase subunit
chr7	30261853	30262066	-	30261853	30262221	A5SS	0.5	50	50	ENSMUST00000207747.2	ENSMUSG00000036835.8	Psenen	chr7	protein_coding	presenilin enhancer gamma secretase subunit
chr7	30262363	30262934	-	30262363	30262477	5pMXE	0.5	50	50	ENSMUST00000043898.8	ENSMUSG00000036835.8	Psenen	chr7	protein_coding	presenilin enhancer gamma secretase subunit
chr7	30262312	30262477	-	30262363	30262477	A3SS	0.5	50	50	ENSMUST00000043898.8	ENSMUSG00000036835.8	Psenen	chr7	protein_coding	presenilin enhancer gamma secretase subunit
chr7	30261559	30262221	-	30261559	30261749	5pMXE	0.5	50	50	ENSMUST00000209110.2	ENSMUSG00000036835.8	Psenen	chr7	protein_coding	presenilin enhancer gamma secretase subunit
chr7	30261559	30262221	-	30261853	30262221	3pMXE	0.5	50	50	ENSMUST00000207797.2	ENSMUSG00000036835.8	Psenen	chr7	protein_coding	presenilin enhancer gamma secretase subunit
chr7	30263421	30263628	+	30263421;30263556	30263507;30263628	ES	0.25	50	50	ENSMUST00000166960.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263556	30263899	+	30263556;30263726	30263628;30263899	ES	0.25	50	50	ENSMUST00000166960.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263726	30264520	+	30263726;30264032	30263899;30264520	ES	0.25	50	50	ENSMUST00000166960.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30264032;30264223	30264128;30264520	+	30264032	30264520	cassetteExon	0.5	100	100	ENSMUST00000166960.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30262774	30262982	+	30262774	30262957	A3SS	0.5	50	50	ENSMUST00000166960.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263044	30263310	+	30263044	30263355	A3SS	0.25	50	50	ENSMUST00000166960.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263044	30264562	+	30263044	30263355	A3SS&ES	0.25	50	50	ENSMUST00000166960.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30262824	30262957	+	30262774	30262957	A5SS	0.33	50	50	ENSMUST00000166960.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30262833	30262957	+	30262774	30262957	A5SS	0.33	50	50	ENSMUST00000166960.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263526	30263628	+	30263556	30263628	A5SS	0.25	50	50	ENSMUST00000166960.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263653	30263899	+	30263726	30263899	A5SS	0.25	50	50	ENSMUST00000166960.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263819	30263899	+	30263726	30263899	A5SS	0.25	50	50	ENSMUST00000166960.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263819	30264520	+	30264032	30264520	A5SS&ES	0.25	50	50	ENSMUST00000166960.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30262824	30262982	+	30262774	30262982	A5SS	0.33	50	50	ENSMUST00000163330.3	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30262833	30262982	+	30262774	30262982	A5SS	0.33	50	50	ENSMUST00000163330.3	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263819	30264520	+	30264223	30264520	A5SS&ES	0.25	50	50	ENSMUST00000163330.3	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30264020	30264128	+	30264032	30264128	A5SS	0.5	50	50	ENSMUST00000163330.3	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263726	30264520	+	30263726	30263899	3pMXE	0.5	50	50	ENSMUST00000163848.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30262824	30262957	+	30262824	30262982	A3SS	0.5	50	50	ENSMUST00000163848.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263044	30263628	+	30263044	30263355	A3SS&ES	0.33	50	50	ENSMUST00000163848.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263421	30263628	+	30263421	30263507	A3SS	0.5	50	50	ENSMUST00000163848.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30262833	30262982	+	30262824	30262982	A5SS	0.33	50	50	ENSMUST00000163848.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263556	30263899	+	30263726	30263899	A5SS	0.25	50	50	ENSMUST00000163848.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30262833	30262957	+	30262824	30262957	A5SS	0.33	50	50	ENSMUST00000043273.16	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263421	30263628	+	30263421;30263526	30263507;30263628	ES	0.25	50	50	ENSMUST00000166510.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263556	30263899	+	30263556	30263628	A3SS	0.5	50	50	ENSMUST00000164438.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263556;30264032	30263899;30264520	+	30263556;30263819	30263628;30264520	MXE	0.5	100	100	ENSMUST00000163276.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263556;30264223	30263899;30264520	+	30263556;30263819	30263628;30264520	MXE	0.5	100	100	ENSMUST00000163276.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263819;30264032	30263899;30264520	+	30263819	30264520	cassetteExon	0.5	100	100	ENSMUST00000163276.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263819;30264223	30263899;30264520	+	30263819	30264520	cassetteExon	0.5	100	100	ENSMUST00000163276.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263726	30264520	+	30263819	30264520	A5SS	0.25	50	50	ENSMUST00000163276.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263044	30263628	+	30263044;30263421	30263310;30263628	ES	0.25	50	50	ENSMUST00000168229.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30264032	30264520	+	30264032	30264128	3pMXE	0.5	50	50	ENSMUST00000168229.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263421;30263556	30263507;30263899	+	30263421;30263726	30263628;30263899	MXE	0.5	100	100	ENSMUST00000168229.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263726	30264520	+	30264223	30264520	A5SS&ES	0.25	50	50	ENSMUST00000168555.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263044	30266704	+	30263044	30263355	3pMXE	0.2	50	50	ENSMUST00000170453.2	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30262833	30262982	+	30262833	30262957	A3SS	0.5	50	50	ENSMUST00000163482.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30264032	30264520	+	30264223	30264520	A5SS&ES	0.25	50	50	ENSMUST00000163482.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263044;30263526	30263310;30263628	+	30263044	30263628	cassetteExon	0.5	100	100	ENSMUST00000166257.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263044;30263556	30263310;30263628	+	30263044	30263628	cassetteExon	0.5	100	100	ENSMUST00000166257.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263044;30263556	30263310;30263899	+	30263044;30263726	30263628;30263899	MXE	0.5	100	100	ENSMUST00000166257.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263044;30263421	30263355;30263628	+	30263044	30263628	cassetteExon	0.5	100	100	ENSMUST00000166257.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263044;30263526	30263355;30263628	+	30263044	30263628	cassetteExon	0.5	100	100	ENSMUST00000166257.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263044;30263556	30263355;30263628	+	30263044	30263628	cassetteExon	0.5	100	100	ENSMUST00000166257.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263044;30263556	30263355;30263899	+	30263044;30263726	30263628;30263899	MXE	0.5	100	100	ENSMUST00000166257.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263044	30264562	+	30263044	30263628	A3SS&ES	0.25	50	50	ENSMUST00000166257.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263556	30263899	+	30263556;30263653	30263628;30263899	ES	0.25	50	50	ENSMUST00000168333.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263819	30263899	+	30263653	30263899	A5SS	0.25	50	50	ENSMUST00000168333.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263044;30263653	30263628;30263899	+	30263044;30263556	30263355;30263899	MXE	0.5	100	100	ENSMUST00000171850.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263044;30263726	30263628;30264520	+	30263044;30264223	30263355;30264520	MXE	0.5	100	100	ENSMUST00000171850.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263044;30263819	30263628;30263899	+	30263044;30263556	30263355;30263899	MXE	0.5	100	100	ENSMUST00000171850.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263044;30263819	30263628;30264520	+	30263044;30264223	30263355;30264520	MXE	0.5	100	100	ENSMUST00000171850.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263421;30263653	30263628;30263899	+	30263421;30263556	30263507;30263899	MXE	0.5	100	100	ENSMUST00000171850.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263421;30263726	30263628;30264520	+	30263421;30264223	30263507;30264520	MXE	0.5	100	100	ENSMUST00000171850.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263421;30263819	30263628;30263899	+	30263421;30263556	30263507;30263899	MXE	0.5	100	100	ENSMUST00000171850.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263421;30263819	30263628;30264520	+	30263421;30264223	30263507;30264520	MXE	0.5	100	100	ENSMUST00000171850.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263556;30263726	30263628;30264520	+	30263556;30264223	30263899;30264520	MXE	0.5	100	100	ENSMUST00000171850.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263556;30263819	30263628;30263899	+	30263556	30263899	cassetteExon	0.5	100	100	ENSMUST00000171850.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263044	30266704	+	30263044	30264562	3pMXE	0.2	50	50	ENSMUST00000166864.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263044	30263310	+	30263044	30264562	A3SS	0.2	50	50	ENSMUST00000166864.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263556;30264032	30263899;30264520	+	30263556;30263726	30263628;30264520	MXE	0.5	100	100	ENSMUST00000167202.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263726;30264223	30263899;30264520	+	30263726	30264520	cassetteExon	0.5	100	100	ENSMUST00000167202.8	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30263044	30263628	+	30263421	30263628	5pMXE	0.25	50	50	ENSMUST00000171364.2	ENSMUSG00000078765.12	U2af1l4	chr7	protein_coding	U2 small nuclear RNA auxiliary factor 1-like 4
chr7	30266859	30267006	+	30266925	30267006	A5SS	0.5	50	50	ENSMUST00000167042.8	ENSMUSG00000109378.2	Gm49396	chr7	protein_coding	predicted gene, 49396
chr7	30266361	30266571	+	30266361	30266568	A3SS	0.5	50	50	ENSMUST00000108161.9	ENSMUSG00000109378.2	Gm49396	chr7	protein_coding	predicted gene, 49396
chr7	30263044	30263310	+	30263044	30266704	A3SS	0.2	50	50	ENSMUST00000163994.2	ENSMUSG00000109378.2	Gm49396	chr7	protein_coding	predicted gene, 49396
chr7	30263044	30263628	+	30263044	30266704	A3SS	0.2	50	50	ENSMUST00000163994.2	ENSMUSG00000109378.2	Gm49396	chr7	protein_coding	predicted gene, 49396
chr7	30270266	30273385	-	30270263	30273385	A3SS	0.5	50	50	ENSMUST00000006470.14	ENSMUSG00000006307.17	Kmt2b	chr7	protein_coding	lysine (K)-specific methyltransferase 2B
chr7	30275475	30276043	-	30275502	30276043	A3SS	0.5	50	50	ENSMUST00000006470.14	ENSMUSG00000006307.17	Kmt2b	chr7	protein_coding	lysine (K)-specific methyltransferase 2B
chr7	30276896	30277908	-	30276880	30277908	A3SS	0.5	50	50	ENSMUST00000006470.14	ENSMUSG00000006307.17	Kmt2b	chr7	protein_coding	lysine (K)-specific methyltransferase 2B
chr7	30289945	30290221	-	30289945;30290126	30290058;30290221	ES	0.5	50	50	ENSMUST00000108151.3	ENSMUSG00000006310.11	Zbtb32	chr7	protein_coding	zinc finger and BTB domain containing 32
chr7	30297808	30298205	-	30290294	30298205	A3SS	0.5	50	50	ENSMUST00000108150.2	ENSMUSG00000006310.11	Zbtb32	chr7	protein_coding	zinc finger and BTB domain containing 32
chr7	30290294	30290482	-	30290294	30298205	A5SS	0.5	50	50	ENSMUST00000108150.2	ENSMUSG00000006310.11	Zbtb32	chr7	protein_coding	zinc finger and BTB domain containing 32
chr7	30322940	30325476	-	30322940;30324038	30323925;30325476	ES	0.5	50	50	ENSMUST00000075738.6	ENSMUSG00000036751.8	Cox6b1	chr7	protein_coding	cytochrome c oxidase, subunit 6B1
chr7	30316587	30322805	-	30316587	30322840	A5SS	0.5	50	50	ENSMUST00000075738.6	ENSMUSG00000036751.8	Cox6b1	chr7	protein_coding	cytochrome c oxidase, subunit 6B1
chr7	30345409	30346985	-	30345246	30346985	A3SS	0.5	50	50	ENSMUST00000108141.2	ENSMUSG00000036733.17	Rbm42	chr7	protein_coding	RNA binding motif protein 42
chr7	30353480	30353595	-	30349608	30353595	A3SS	0.5	50	50	ENSMUST00000146232.2	ENSMUSG00000094365.2	Gm21982	chr7	lncRNA	predicted gene 21982
chr7	30356442	30356587	-	30356503	30356587	A3SS	0.5	50	50	ENSMUST00000146232.2	ENSMUSG00000094365.2	Gm21982	chr7	lncRNA	predicted gene 21982
chr7	30370605	30370925	-	30370605	30370791	A5SS	0.5	50	50	ENSMUST00000051495.7	ENSMUSG00000049761.7	Pmis2	chr7	protein_coding	PMIS2 transmembrane protein
chr7	30398411	30398978	+	30398411	30398982	A3SS	0.5	50	50	ENSMUST00000207565.2	ENSMUSG00000013083.9	2200002J24Rik	chr7	protein_coding	RIKEN cDNA 2200002J24 gene
chr7	30398407	30398982	+	30398411	30398982	A5SS	0.5	50	50	ENSMUST00000207565.2	ENSMUSG00000013083.9	2200002J24Rik	chr7	protein_coding	RIKEN cDNA 2200002J24 gene
chr7	30417308	30419348	+	30417308	30418404	A3SS&ES	0.5	50	50	ENSMUST00000167761.8	ENSMUSG00000005553.15	Atp4a	chr7	protein_coding	ATPase, H+/K+ exchanging, gastric, alpha polypeptide
chr7	30419765	30419892	+	30419792	30419892	A5SS	0.5	50	50	ENSMUST00000167761.8	ENSMUSG00000005553.15	Atp4a	chr7	protein_coding	ATPase, H+/K+ exchanging, gastric, alpha polypeptide
chr7	30427533	30428082	-	30427533	30427630	5pMXE	0.5	50	50	ENSMUST00000207955.2	ENSMUSG00000006315.10	Tmem147	chr7	protein_coding	transmembrane protein 147
chr7	30427554	30427630	-	30427533	30427630	A3SS	0.5	50	50	ENSMUST00000207955.2	ENSMUSG00000006315.10	Tmem147	chr7	protein_coding	transmembrane protein 147
chr7	30428166	30428627	-	30428141	30428627	A3SS	0.5	50	50	ENSMUST00000209065.2	ENSMUSG00000006315.10	Tmem147	chr7	protein_coding	transmembrane protein 147
chr7	30427714	30427924	-	30427714	30427857	A5SS	0.5	50	50	ENSMUST00000209065.2	ENSMUSG00000006315.10	Tmem147	chr7	protein_coding	transmembrane protein 147
chr7	30427533;30427993	30427630;30428082	-	30427533	30428082	cassetteExon	0.5	100	100	ENSMUST00000208169.2	ENSMUSG00000006315.10	Tmem147	chr7	protein_coding	transmembrane protein 147
chr7	30427533	30428082	-	30427993	30428082	A3SS&ES	0.5	50	50	ENSMUST00000207296.2	ENSMUSG00000006315.10	Tmem147	chr7	protein_coding	transmembrane protein 147
chr7	30435387	30454234	+	30435387	30436726	3pMXE	0.5	50	50	ENSMUST00000183194.2	ENSMUSG00000097320.9	Tmem147os	chr7	lncRNA	transmembrane protein 147, opposite strand
chr7	30431772	30432037	-	30431750	30432037	A3SS	0.5	50	50	ENSMUST00000182067.8	ENSMUSG00000061099.13	Gapdhs	chr7	protein_coding	glyceraldehyde-3-phosphate dehydrogenase, spermatogenic
chr7	30437460	30438685	-	30437460	30442977	A5SS	0.5	50	50	ENSMUST00000182634.8	ENSMUSG00000061099.13	Gapdhs	chr7	protein_coding	glyceraldehyde-3-phosphate dehydrogenase, spermatogenic
chr7	30451124	30454234	+	30435387	30454234	A5SS	0.2	50	50	ENSMUST00000182488.2	ENSMUSG00000109224.2	Tmem147os	chr7	lncRNA	transmembrane protein 147, opposite strand
chr7	30451340	30454234	+	30435387	30454234	A5SS	0.2	50	50	ENSMUST00000182488.2	ENSMUSG00000109224.2	Tmem147os	chr7	lncRNA	transmembrane protein 147, opposite strand
chr7	30451376	30454234	+	30435387	30454234	A5SS	0.2	50	50	ENSMUST00000182488.2	ENSMUSG00000109224.2	Tmem147os	chr7	lncRNA	transmembrane protein 147, opposite strand
chr7	30452894	30454234	+	30435387	30454234	A5SS	0.2	50	50	ENSMUST00000182488.2	ENSMUSG00000109224.2	Tmem147os	chr7	lncRNA	transmembrane protein 147, opposite strand
chr7	30451124	30454234	+	30451340	30454234	A5SS	0.2	50	50	ENSMUST00000182229.8	ENSMUSG00000046056.16	Sbsn	chr7	protein_coding	suprabasin
chr7	30451376	30454234	+	30451340	30454234	A5SS	0.2	50	50	ENSMUST00000182229.8	ENSMUSG00000046056.16	Sbsn	chr7	protein_coding	suprabasin
chr7	30452894	30454234	+	30451340	30454234	A5SS	0.2	50	50	ENSMUST00000182229.8	ENSMUSG00000046056.16	Sbsn	chr7	protein_coding	suprabasin
chr7	30451124	30454234	+	30452894	30454234	A5SS	0.2	50	50	ENSMUST00000080518.14	ENSMUSG00000046056.16	Sbsn	chr7	protein_coding	suprabasin
chr7	30451376	30454234	+	30452894	30454234	A5SS	0.2	50	50	ENSMUST00000080518.14	ENSMUSG00000046056.16	Sbsn	chr7	protein_coding	suprabasin
chr7	30451376	30454234	+	30451124	30454234	A5SS	0.2	50	50	ENSMUST00000182227.8	ENSMUSG00000046056.16	Sbsn	chr7	protein_coding	suprabasin
chr7	30464898	30466585	+	30464898;30465942	30465898;30466585	ES	0.33	50	50	ENSMUST00000165887.8	ENSMUSG00000060962.13	Dmkn	chr7	protein_coding	dermokine
chr7	30466855	30470458	+	30466855;30469187	30469140;30470458	ES	0.5	50	50	ENSMUST00000165887.8	ENSMUSG00000060962.13	Dmkn	chr7	protein_coding	dermokine
chr7	30465942;30466029	30466003;30466585	+	30465942	30466585	cassetteExon	0.5	100	100	ENSMUST00000165887.8	ENSMUSG00000060962.13	Dmkn	chr7	protein_coding	dermokine
chr7	30475923	30477033	+	30475548	30477033	A5SS	0.5	50	50	ENSMUST00000165887.8	ENSMUSG00000060962.13	Dmkn	chr7	protein_coding	dermokine
chr7	30464898;30466029	30465898;30466585	+	30464898	30466585	cassetteExon	0.5	100	100	ENSMUST00000085688.11	ENSMUSG00000060962.13	Dmkn	chr7	protein_coding	dermokine
chr7	30488968	30489337	+	30488968	30489138	3pMXE	0.33	50	50	ENSMUST00000190480.2	ENSMUSG00000074199.8	Krtdap	chr7	protein_coding	keratinocyte differentiation associated protein
chr7	30488968	30490345	+	30488968	30489138	3pMXE	0.33	50	50	ENSMUST00000190480.2	ENSMUSG00000074199.8	Krtdap	chr7	protein_coding	keratinocyte differentiation associated protein
chr7	30488968;30489179	30489138;30489337	+	30488968	30489337	cassetteExon	0.5	100	100	ENSMUST00000189673.7	ENSMUSG00000074199.8	Krtdap	chr7	protein_coding	keratinocyte differentiation associated protein
chr7	30488968	30490345	+	30488968	30489337	A3SS&ES	0.33	50	50	ENSMUST00000189673.7	ENSMUSG00000074199.8	Krtdap	chr7	protein_coding	keratinocyte differentiation associated protein
chr7	30490040	30490345	+	30490040	30490398	A3SS	0.5	50	50	ENSMUST00000189673.7	ENSMUSG00000074199.8	Krtdap	chr7	protein_coding	keratinocyte differentiation associated protein
chr7	30490040	30490345	+	30488968	30490345	A5SS	0.5	50	50	ENSMUST00000189962.7	ENSMUSG00000074199.8	Krtdap	chr7	protein_coding	keratinocyte differentiation associated protein
chr7	30519539	30520102	-	30519712	30520102	A3SS	0.5	50	50	ENSMUST00000053156.10	ENSMUSG00000051314.12	Ffar2	chr7	protein_coding	free fatty acid receptor 2
chr7	30520163	30520472	-	30520163	30522902	A5SS	0.25	50	50	ENSMUST00000053156.10	ENSMUSG00000051314.12	Ffar2	chr7	protein_coding	free fatty acid receptor 2
chr7	30520163	30520532	-	30520163	30522902	A5SS	0.25	50	50	ENSMUST00000053156.10	ENSMUSG00000051314.12	Ffar2	chr7	protein_coding	free fatty acid receptor 2
chr7	30520163	30520925	-	30520163	30522902	A5SS	0.25	50	50	ENSMUST00000053156.10	ENSMUSG00000051314.12	Ffar2	chr7	protein_coding	free fatty acid receptor 2
chr7	30520163	30520925	-	30520163	30520472	5pMXE	0.25	50	50	ENSMUST00000163504.8	ENSMUSG00000051314.12	Ffar2	chr7	protein_coding	free fatty acid receptor 2
chr7	30520163	30520532	-	30520163	30520472	A5SS	0.25	50	50	ENSMUST00000163504.8	ENSMUSG00000051314.12	Ffar2	chr7	protein_coding	free fatty acid receptor 2
chr7	30520163	30520532	-	30520163	30520925	A5SS	0.25	50	50	ENSMUST00000168528.8	ENSMUSG00000051314.12	Ffar2	chr7	protein_coding	free fatty acid receptor 2
chr7	30577532	30578602	-	30577532	30578237	5pMXE	0.25	50	50	ENSMUST00000019248.13	ENSMUSG00000030577.15	Cd22	chr7	protein_coding	CD22 antigen
chr7	30577532	30578620	-	30577532	30578237	5pMXE	0.25	50	50	ENSMUST00000019248.13	ENSMUSG00000030577.15	Cd22	chr7	protein_coding	CD22 antigen
chr7	30577532	30579661	-	30577532	30578237	5pMXE	0.25	50	50	ENSMUST00000019248.13	ENSMUSG00000030577.15	Cd22	chr7	protein_coding	CD22 antigen
chr7	30567337	30568935	-	30567484	30568935	A3SS&ES	0.5	50	50	ENSMUST00000019248.13	ENSMUSG00000030577.15	Cd22	chr7	protein_coding	CD22 antigen
chr7	30572300	30572560	-	30572424	30572560	A3SS	0.33	50	50	ENSMUST00000019248.13	ENSMUSG00000030577.15	Cd22	chr7	protein_coding	CD22 antigen
chr7	30577113	30577475	-	30577268	30577475	A3SS	0.25	50	50	ENSMUST00000019248.13	ENSMUSG00000030577.15	Cd22	chr7	protein_coding	CD22 antigen
chr7	30577320	30577475	-	30577268	30577475	A3SS	0.25	50	50	ENSMUST00000019248.13	ENSMUSG00000030577.15	Cd22	chr7	protein_coding	CD22 antigen
chr7	30577342	30577475	-	30577268	30577475	A3SS	0.25	50	50	ENSMUST00000019248.13	ENSMUSG00000030577.15	Cd22	chr7	protein_coding	CD22 antigen
chr7	30572424	30572541	-	30572424	30572560	A5SS	0.5	50	50	ENSMUST00000019248.13	ENSMUSG00000030577.15	Cd22	chr7	protein_coding	CD22 antigen
chr7	30578765	30579661	-	30578765	30579354	5pMXE	0.5	50	50	ENSMUST00000190646.7	ENSMUSG00000030577.15	Cd22	chr7	protein_coding	CD22 antigen
chr7	30569544	30572560	-	30569544	30569771	A5SS&ES	0.5	50	50	ENSMUST00000190646.7	ENSMUSG00000030577.15	Cd22	chr7	protein_coding	CD22 antigen
chr7	30577532	30578602	-	30577532	30578620	A5SS	0.33	50	50	ENSMUST00000190646.7	ENSMUSG00000030577.15	Cd22	chr7	protein_coding	CD22 antigen
chr7	30577532	30579661	-	30577532	30578620	A5SS&ES	0.25	50	50	ENSMUST00000186154.7	ENSMUSG00000030577.15	Cd22	chr7	protein_coding	CD22 antigen
chr7	30578765	30579661	-	30578765;30579442	30579354;30579661	ES	0.25	50	50	ENSMUST00000190617.7	ENSMUSG00000030577.15	Cd22	chr7	protein_coding	CD22 antigen
chr7	30579456	30579661	-	30579442	30579661	A3SS	0.25	50	50	ENSMUST00000190617.7	ENSMUSG00000030577.15	Cd22	chr7	protein_coding	CD22 antigen
chr7	30577113	30577475	-	30577342	30577475	A3SS	0.25	50	50	ENSMUST00000187989.7	ENSMUSG00000030577.15	Cd22	chr7	protein_coding	CD22 antigen
chr7	30577320	30577475	-	30577342	30577475	A3SS	0.25	50	50	ENSMUST00000187989.7	ENSMUSG00000030577.15	Cd22	chr7	protein_coding	CD22 antigen
chr7	30572300	30572560	-	30569544	30572560	A3SS	0.33	50	50	ENSMUST00000214289.2	ENSMUSG00000030577.15	Cd22	chr7	protein_coding	CD22 antigen
chr7	30572424	30572560	-	30569544	30572560	A3SS	0.33	50	50	ENSMUST00000214289.2	ENSMUSG00000030577.15	Cd22	chr7	protein_coding	CD22 antigen
chr7	30577532	30579661	-	30577532	30578602	5pMXE	0.25	50	50	ENSMUST00000186354.7	ENSMUSG00000030577.15	Cd22	chr7	protein_coding	CD22 antigen
chr7	30577320	30577475	-	30577113	30577475	A3SS	0.25	50	50	ENSMUST00000186354.7	ENSMUSG00000030577.15	Cd22	chr7	protein_coding	CD22 antigen
chr7	30577532;30578765	30578602;30579661	-	30577532	30579661	cassetteExon	0.5	100	100	ENSMUST00000188157.7	ENSMUSG00000030577.15	Cd22	chr7	protein_coding	CD22 antigen
chr7	30577532;30578765	30578620;30579661	-	30577532	30579661	cassetteExon	0.5	100	100	ENSMUST00000188157.7	ENSMUSG00000030577.15	Cd22	chr7	protein_coding	CD22 antigen
chr7	30579442	30579661	-	30577532	30579661	A3SS	0.25	50	50	ENSMUST00000188157.7	ENSMUSG00000030577.15	Cd22	chr7	protein_coding	CD22 antigen
chr7	30579456	30579661	-	30577532	30579661	A3SS	0.25	50	50	ENSMUST00000188157.7	ENSMUSG00000030577.15	Cd22	chr7	protein_coding	CD22 antigen
chr7	30578765	30579661	-	30578765;30579456	30579354;30579661	ES	0.25	50	50	ENSMUST00000190170.7	ENSMUSG00000030577.15	Cd22	chr7	protein_coding	CD22 antigen
chr7	30599123	30600063	-	30599123;30599821	30599777;30600063	ES	0.5	50	50	ENSMUST00000187137.7	ENSMUSG00000036634.16	Mag	chr7	protein_coding	myelin-associated glycoprotein
chr7	30612304	30614244	-	30612304;30613746	30613694;30614244	ES	0.5	50	50	ENSMUST00000187137.7	ENSMUSG00000036634.16	Mag	chr7	protein_coding	myelin-associated glycoprotein
chr7	30611710	30612249	-	30611388	30612249	A3SS	0.5	50	50	ENSMUST00000187137.7	ENSMUSG00000036634.16	Mag	chr7	protein_coding	myelin-associated glycoprotein
chr7	30612304	30613690	-	30612304	30613694	A5SS	0.33	50	50	ENSMUST00000187137.7	ENSMUSG00000036634.16	Mag	chr7	protein_coding	myelin-associated glycoprotein
chr7	30612304	30614244	-	30612304	30613694	5pMXE	0.33	50	50	ENSMUST00000040548.14	ENSMUSG00000036634.16	Mag	chr7	protein_coding	myelin-associated glycoprotein
chr7	30612304;30613746	30613690;30614244	-	30612304	30614244	cassetteExon	0.5	100	100	ENSMUST00000186422.7	ENSMUSG00000036634.16	Mag	chr7	protein_coding	myelin-associated glycoprotein
chr7	30622180	30623961	-	30622180	30623471	5pMXE	0.5	50	50	ENSMUST00000217812.2	ENSMUSG00000056978.9	Hamp2	chr7	protein_coding	hepcidin antimicrobial peptide 2
chr7	30654865	30655574	-	30654865;30655425	30655225;30655574	ES	0.33	50	50	ENSMUST00000058860.14	ENSMUSG00000058239.14	Usf2	chr7	protein_coding	upstream transcription factor 2
chr7	30655692	30656121	-	30655692;30655853	30655807;30656121	ES	0.33	50	50	ENSMUST00000058860.14	ENSMUSG00000058239.14	Usf2	chr7	protein_coding	upstream transcription factor 2
chr7	30646280	30646390	-	30646304	30646390	A3SS	0.5	50	50	ENSMUST00000058860.14	ENSMUSG00000058239.14	Usf2	chr7	protein_coding	upstream transcription factor 2
chr7	30654577	30655574	-	30655425	30655574	A3SS&ES	0.33	50	50	ENSMUST00000058860.14	ENSMUSG00000058239.14	Usf2	chr7	protein_coding	upstream transcription factor 2
chr7	30654865	30655306	-	30654865	30655225	A5SS	0.25	50	50	ENSMUST00000058860.14	ENSMUSG00000058239.14	Usf2	chr7	protein_coding	upstream transcription factor 2
chr7	30654865	30656121	-	30654865	30655574	5pMXE	0.25	50	50	ENSMUST00000167285.8	ENSMUSG00000058239.14	Usf2	chr7	protein_coding	upstream transcription factor 2
chr7	30654227;30655425	30655225;30655574	-	30654227;30654865	30654531;30655574	MXE	0.5	100	100	ENSMUST00000167285.8	ENSMUSG00000058239.14	Usf2	chr7	protein_coding	upstream transcription factor 2
chr7	30654865;30655425	30655306;30655574	-	30654865	30655574	cassetteExon	0.5	100	100	ENSMUST00000167285.8	ENSMUSG00000058239.14	Usf2	chr7	protein_coding	upstream transcription factor 2
chr7	30654577	30655574	-	30654865	30655574	A3SS&ES	0.33	50	50	ENSMUST00000167285.8	ENSMUSG00000058239.14	Usf2	chr7	protein_coding	upstream transcription factor 2
chr7	30654227	30655225	-	30654227	30654531	A5SS&ES	0.5	50	50	ENSMUST00000162228.9	ENSMUSG00000058239.14	Usf2	chr7	protein_coding	upstream transcription factor 2
chr7	30654227;30655692	30655225;30656121	-	30654227;30654865	30654531;30656121	MXE	0.5	100	100	ENSMUST00000170699.8	ENSMUSG00000058239.14	Usf2	chr7	protein_coding	upstream transcription factor 2
chr7	30654865;30655692	30655225;30656121	-	30654865	30656121	cassetteExon	0.5	100	100	ENSMUST00000170699.8	ENSMUSG00000058239.14	Usf2	chr7	protein_coding	upstream transcription factor 2
chr7	30654865;30655692	30655306;30656121	-	30654865	30656121	cassetteExon	0.5	100	100	ENSMUST00000170699.8	ENSMUSG00000058239.14	Usf2	chr7	protein_coding	upstream transcription factor 2
chr7	30654865;30655692	30655574;30656121	-	30654865	30656121	cassetteExon	0.5	100	100	ENSMUST00000170699.8	ENSMUSG00000058239.14	Usf2	chr7	protein_coding	upstream transcription factor 2
chr7	30654865;30655853	30655574;30656121	-	30654865	30656121	cassetteExon	0.5	100	100	ENSMUST00000170699.8	ENSMUSG00000058239.14	Usf2	chr7	protein_coding	upstream transcription factor 2
chr7	30654227;30655425	30655225;30655574	-	30654227;30654577	30654531;30655574	MXE	0.5	100	100	ENSMUST00000172417.3	ENSMUSG00000058239.14	Usf2	chr7	protein_coding	upstream transcription factor 2
chr7	30654865	30656121	-	30655853	30656121	A3SS&ES	0.33	50	50	ENSMUST00000172417.3	ENSMUSG00000058239.14	Usf2	chr7	protein_coding	upstream transcription factor 2
chr7	30654227;30654865	30654531;30655225	-	30654227	30655225	cassetteExon	0.5	100	100	ENSMUST00000166340.2	ENSMUSG00000058239.14	Usf2	chr7	protein_coding	upstream transcription factor 2
chr7	30654865	30655574	-	30655425	30655574	3pMXE	0.33	50	50	ENSMUST00000168731.2	ENSMUSG00000058239.14	Usf2	chr7	protein_coding	upstream transcription factor 2
chr7	30655692	30656121	-	30655692	30655807	5pMXE	0.5	50	50	ENSMUST00000168731.2	ENSMUSG00000058239.14	Usf2	chr7	protein_coding	upstream transcription factor 2
chr7	30658739;30661546	30661523;30672505	-	30658739;30671637	30665394;30672505	MXE	0.5	100	100	ENSMUST00000098553.11	ENSMUSG00000001247.17	Lsr	chr7	protein_coding	lipolysis stimulated lipoprotein receptor
chr7	30658739;30661669	30661523;30665394	-	30658739	30665394	cassetteExon	0.5	100	100	ENSMUST00000098553.11	ENSMUSG00000001247.17	Lsr	chr7	protein_coding	lipolysis stimulated lipoprotein receptor
chr7	30662292	30665394	-	30658739	30665394	A3SS	0.33	50	50	ENSMUST00000098553.11	ENSMUSG00000001247.17	Lsr	chr7	protein_coding	lipolysis stimulated lipoprotein receptor
chr7	30661669	30665394	-	30661669;30662292	30662236;30665394	ES	0.33	50	50	ENSMUST00000001279.15	ENSMUSG00000001247.17	Lsr	chr7	protein_coding	lipolysis stimulated lipoprotein receptor
chr7	30661546	30672505	-	30671637	30672505	A3SS&ES	0.5	50	50	ENSMUST00000001279.15	ENSMUSG00000001247.17	Lsr	chr7	protein_coding	lipolysis stimulated lipoprotein receptor
chr7	30658739	30665394	-	30658739	30661523	A5SS&ES	0.5	50	50	ENSMUST00000147431.2	ENSMUSG00000001247.17	Lsr	chr7	protein_coding	lipolysis stimulated lipoprotein receptor
chr7	30677205	30688405	+	30673700	30688405	A5SS	0.33	50	50	ENSMUST00000129773.2	ENSMUSG00000046826.8	Fam187b	chr7	protein_coding	family with sequence similarity 187, member B
chr7	30682055	30688405	+	30673700	30688405	A5SS	0.33	50	50	ENSMUST00000129773.2	ENSMUSG00000046826.8	Fam187b	chr7	protein_coding	family with sequence similarity 187, member B
chr7	30682055	30688405	+	30677205	30688405	A5SS	0.33	50	50	ENSMUST00000058093.6	ENSMUSG00000046826.8	Fam187b	chr7	protein_coding	family with sequence similarity 187, member B
chr7	30737356	30738463	-	30737353	30738463	A3SS	0.5	50	50	ENSMUST00000161805.8	ENSMUSG00000009687.15	Fxyd5	chr7	protein_coding	FXYD domain-containing ion transport regulator 5
chr7	30739646	30740822	-	30739682	30740822	A3SS	0.33	50	50	ENSMUST00000161805.8	ENSMUSG00000009687.15	Fxyd5	chr7	protein_coding	FXYD domain-containing ion transport regulator 5
chr7	30739697	30740822	-	30739682	30740822	A3SS	0.33	50	50	ENSMUST00000161805.8	ENSMUSG00000009687.15	Fxyd5	chr7	protein_coding	FXYD domain-containing ion transport regulator 5
chr7	30740894	30741515	-	30740882	30741515	A3SS	0.5	50	50	ENSMUST00000161684.8	ENSMUSG00000009687.15	Fxyd5	chr7	protein_coding	FXYD domain-containing ion transport regulator 5
chr7	30740882	30741472	-	30740882	30741515	A5SS	0.5	50	50	ENSMUST00000161684.8	ENSMUSG00000009687.15	Fxyd5	chr7	protein_coding	FXYD domain-containing ion transport regulator 5
chr7	30740894	30741515	-	30740894	30741472	5pMXE	0.5	50	50	ENSMUST00000162116.8	ENSMUSG00000009687.15	Fxyd5	chr7	protein_coding	FXYD domain-containing ion transport regulator 5
chr7	30740882	30741472	-	30740894	30741472	A3SS	0.5	50	50	ENSMUST00000162116.8	ENSMUSG00000009687.15	Fxyd5	chr7	protein_coding	FXYD domain-containing ion transport regulator 5
chr7	30739697	30740822	-	30739646	30740822	A3SS	0.33	50	50	ENSMUST00000202395.4	ENSMUSG00000009687.15	Fxyd5	chr7	protein_coding	FXYD domain-containing ion transport regulator 5
chr7	30744036	30744133	-	30744036	30744142	A5SS	0.5	50	50	ENSMUST00000206341.2	ENSMUSG00000036578.8	Fxyd7	chr7	protein_coding	FXYD domain-containing ion transport regulator 7
chr7	30752486	30753318	-	30752486;30752899	30752825;30753318	ES	0.5	50	50	ENSMUST00000206328.2	ENSMUSG00000036570.15	Fxyd1	chr7	protein_coding	FXYD domain-containing ion transport regulator 1
chr7	30753795	30754976	-	30753795	30754743	5pMXE	0.16	50	50	ENSMUST00000206328.2	ENSMUSG00000036570.15	Fxyd1	chr7	protein_coding	FXYD domain-containing ion transport regulator 1
chr7	30753795	30756225	-	30753795	30754743	5pMXE	0.16	50	50	ENSMUST00000206328.2	ENSMUSG00000036570.15	Fxyd1	chr7	protein_coding	FXYD domain-containing ion transport regulator 1
chr7	30751205	30751358	-	30751240	30751358	A3SS	0.5	50	50	ENSMUST00000206328.2	ENSMUSG00000036570.15	Fxyd1	chr7	protein_coding	FXYD domain-containing ion transport regulator 1
chr7	30753795	30754098	-	30753795	30754743	A5SS	0.16	50	50	ENSMUST00000206328.2	ENSMUSG00000036570.15	Fxyd1	chr7	protein_coding	FXYD domain-containing ion transport regulator 1
chr7	30753795	30754176	-	30753795	30754743	A5SS	0.16	50	50	ENSMUST00000206328.2	ENSMUSG00000036570.15	Fxyd1	chr7	protein_coding	FXYD domain-containing ion transport regulator 1
chr7	30753795	30754190	-	30753795	30754743	A5SS	0.16	50	50	ENSMUST00000206328.2	ENSMUSG00000036570.15	Fxyd1	chr7	protein_coding	FXYD domain-containing ion transport regulator 1
chr7	30753795	30756225	-	30753795	30754976	5pMXE	0.16	50	50	ENSMUST00000205807.2	ENSMUSG00000036570.15	Fxyd1	chr7	protein_coding	FXYD domain-containing ion transport regulator 1
chr7	30753859	30754976	-	30753795	30754976	A3SS	0.5	50	50	ENSMUST00000205807.2	ENSMUSG00000036570.15	Fxyd1	chr7	protein_coding	FXYD domain-containing ion transport regulator 1
chr7	30753795	30754098	-	30753795	30754976	A5SS	0.16	50	50	ENSMUST00000205807.2	ENSMUSG00000036570.15	Fxyd1	chr7	protein_coding	FXYD domain-containing ion transport regulator 1
chr7	30753795	30754176	-	30753795	30754976	A5SS	0.16	50	50	ENSMUST00000205807.2	ENSMUSG00000036570.15	Fxyd1	chr7	protein_coding	FXYD domain-containing ion transport regulator 1
chr7	30753795	30754190	-	30753795	30754976	A5SS	0.16	50	50	ENSMUST00000205807.2	ENSMUSG00000036570.15	Fxyd1	chr7	protein_coding	FXYD domain-containing ion transport regulator 1
chr7	30752486	30753318	-	30752486	30752825	5pMXE	0.5	50	50	ENSMUST00000205917.2	ENSMUSG00000036570.15	Fxyd1	chr7	protein_coding	FXYD domain-containing ion transport regulator 1
chr7	30753795	30756225	-	30753795	30754176	5pMXE	0.16	50	50	ENSMUST00000206012.2	ENSMUSG00000036570.15	Fxyd1	chr7	protein_coding	FXYD domain-containing ion transport regulator 1
chr7	30753795	30754098	-	30753795	30754176	A5SS	0.16	50	50	ENSMUST00000206012.2	ENSMUSG00000036570.15	Fxyd1	chr7	protein_coding	FXYD domain-containing ion transport regulator 1
chr7	30753795	30754190	-	30753795	30754176	A5SS	0.16	50	50	ENSMUST00000206012.2	ENSMUSG00000036570.15	Fxyd1	chr7	protein_coding	FXYD domain-containing ion transport regulator 1
chr7	30753859	30754190	-	30753859	30754976	A5SS	0.5	50	50	ENSMUST00000039909.13	ENSMUSG00000036570.15	Fxyd1	chr7	protein_coding	FXYD domain-containing ion transport regulator 1
chr7	30753795	30756225	-	30753795	30754190	5pMXE	0.16	50	50	ENSMUST00000205778.2	ENSMUSG00000036570.15	Fxyd1	chr7	protein_coding	FXYD domain-containing ion transport regulator 1
chr7	30753859	30754190	-	30753795	30754190	A3SS	0.5	50	50	ENSMUST00000205778.2	ENSMUSG00000036570.15	Fxyd1	chr7	protein_coding	FXYD domain-containing ion transport regulator 1
chr7	30753795	30754098	-	30753795	30754190	A5SS	0.16	50	50	ENSMUST00000205778.2	ENSMUSG00000036570.15	Fxyd1	chr7	protein_coding	FXYD domain-containing ion transport regulator 1
chr7	30753795	30756225	-	30753795	30754098	5pMXE	0.16	50	50	ENSMUST00000206860.2	ENSMUSG00000036570.15	Fxyd1	chr7	protein_coding	FXYD domain-containing ion transport regulator 1
chr7	30763154	30763348	+	30763154	30766520	A3SS	0.33	50	50	ENSMUST00000039775.9	ENSMUSG00000036560.15	Lgi4	chr7	protein_coding	leucine-rich repeat LGI family, member 4
chr7	30763154	30763746	+	30763154	30766520	A3SS	0.33	50	50	ENSMUST00000039775.9	ENSMUSG00000036560.15	Lgi4	chr7	protein_coding	leucine-rich repeat LGI family, member 4
chr7	30763154	30763746	+	30763154	30763348	3pMXE	0.33	50	50	ENSMUST00000164725.3	ENSMUSG00000036560.15	Lgi4	chr7	protein_coding	leucine-rich repeat LGI family, member 4
chr7	30771638	30776046	-	30771638;30773060	30773007;30776046	ES	0.5	50	50	ENSMUST00000167369.8	ENSMUSG00000057092.13	Fxyd3	chr7	protein_coding	FXYD domain-containing ion transport regulator 3
chr7	30773060	30774265	-	30773060	30776046	A5SS	0.5	50	50	ENSMUST00000167369.8	ENSMUSG00000057092.13	Fxyd3	chr7	protein_coding	FXYD domain-containing ion transport regulator 3
chr7	30771638	30776046	-	30773060	30776046	3pMXE	0.5	50	50	ENSMUST00000170456.2	ENSMUSG00000057092.13	Fxyd3	chr7	protein_coding	FXYD domain-containing ion transport regulator 3
chr7	30810198	30814103	-	30810198	30810288	5pMXE	0.25	50	50	ENSMUST00000039435.15	ENSMUSG00000001249.15	Hpn	chr7	protein_coding	hepsin
chr7	30798333	30798640	-	30798498	30798640	A3SS	0.33	50	50	ENSMUST00000039435.15	ENSMUSG00000001249.15	Hpn	chr7	protein_coding	hepsin
chr7	30798555	30798640	-	30798498	30798640	A3SS	0.33	50	50	ENSMUST00000039435.15	ENSMUSG00000001249.15	Hpn	chr7	protein_coding	hepsin
chr7	30810198	30810292	-	30810198	30810288	A5SS	0.25	50	50	ENSMUST00000039435.15	ENSMUSG00000001249.15	Hpn	chr7	protein_coding	hepsin
chr7	30810198	30810387	-	30810198	30810288	A5SS	0.25	50	50	ENSMUST00000039435.15	ENSMUSG00000001249.15	Hpn	chr7	protein_coding	hepsin
chr7	30808617;30810198	30810139;30814103	-	30808617	30814103	cassetteExon	0.5	100	100	ENSMUST00000165124.8	ENSMUSG00000001249.15	Hpn	chr7	protein_coding	hepsin
chr7	30810198	30810292	-	30810198	30814103	A5SS	0.25	50	50	ENSMUST00000108102.9	ENSMUSG00000001249.15	Hpn	chr7	protein_coding	hepsin
chr7	30810198	30810387	-	30810198	30814103	A5SS	0.25	50	50	ENSMUST00000108102.9	ENSMUSG00000001249.15	Hpn	chr7	protein_coding	hepsin
chr7	30798555	30798640	-	30798333	30798640	A3SS	0.33	50	50	ENSMUST00000171259.2	ENSMUSG00000001249.15	Hpn	chr7	protein_coding	hepsin
chr7	30810198	30810292	-	30810198	30810387	A5SS	0.25	50	50	ENSMUST00000164929.3	ENSMUSG00000001249.15	Hpn	chr7	protein_coding	hepsin
chr7	30832290	30833416	-	30832290;30832656	30832645;30833416	ES	0.5	50	50	ENSMUST00000220635.2	ENSMUSG00000001248.16	Gramd1a	chr7	protein_coding	GRAM domain containing 1A
chr7	30837682	30838822	-	30837682;30838375	30838177;30838822	ES	0.5	50	50	ENSMUST00000185985.7	ENSMUSG00000001248.16	Gramd1a	chr7	protein_coding	GRAM domain containing 1A
chr7	30843298	30851262	-	30843298	30850321	5pMXE	0.25	50	50	ENSMUST00000185985.7	ENSMUSG00000001248.16	Gramd1a	chr7	protein_coding	GRAM domain containing 1A
chr7	30843298	30854292	-	30843298	30850321	5pMXE	0.25	50	50	ENSMUST00000185985.7	ENSMUSG00000001248.16	Gramd1a	chr7	protein_coding	GRAM domain containing 1A
chr7	30843298;30845262	30845175;30850321	-	30843298	30850321	cassetteExon	0.5	100	100	ENSMUST00000185985.7	ENSMUSG00000001248.16	Gramd1a	chr7	protein_coding	GRAM domain containing 1A
chr7	30842000	30842229	-	30842079	30842229	A3SS	0.5	50	50	ENSMUST00000185985.7	ENSMUSG00000001248.16	Gramd1a	chr7	protein_coding	GRAM domain containing 1A
chr7	30833756	30834004	-	30833756	30833839	A5SS	0.5	50	50	ENSMUST00000185985.7	ENSMUSG00000001248.16	Gramd1a	chr7	protein_coding	GRAM domain containing 1A
chr7	30833756;30833942	30833839;30835022	-	30833756;30834005	30834004;30835022	MXE	0.5	100	100	ENSMUST00000085636.13	ENSMUSG00000001248.16	Gramd1a	chr7	protein_coding	GRAM domain containing 1A
chr7	30833942	30835022	-	30833942	30834951	A5SS	0.33	50	50	ENSMUST00000186634.7	ENSMUSG00000001248.16	Gramd1a	chr7	protein_coding	GRAM domain containing 1A
chr7	30833942	30835133	-	30833942	30834951	A5SS	0.33	50	50	ENSMUST00000186634.7	ENSMUSG00000001248.16	Gramd1a	chr7	protein_coding	GRAM domain containing 1A
chr7	30833942	30835133	-	30833942	30835022	A5SS	0.33	50	50	ENSMUST00000001280.14	ENSMUSG00000001248.16	Gramd1a	chr7	protein_coding	GRAM domain containing 1A
chr7	30843298	30854292	-	30843298	30851262	5pMXE	0.25	50	50	ENSMUST00000187679.7	ENSMUSG00000001248.16	Gramd1a	chr7	protein_coding	GRAM domain containing 1A
chr7	30843298	30845175	-	30843298	30851262	A5SS	0.25	50	50	ENSMUST00000187679.7	ENSMUSG00000001248.16	Gramd1a	chr7	protein_coding	GRAM domain containing 1A
chr7	30843298	30845175	-	30843298	30854292	A5SS	0.25	50	50	ENSMUST00000186723.3	ENSMUSG00000001248.16	Gramd1a	chr7	protein_coding	GRAM domain containing 1A
chr7	32528533	32528934	-	32528533	32529008	A5SS	0.5	50	50	ENSMUST00000182975.2	ENSMUSG00000097972.2	Scgb2b15	chr7	protein_coding	secretoglobin, family 2B, member 15
chr7	32755432	32755907	-	32755429	32755907	A3SS	0.5	50	50	ENSMUST00000182640.8	ENSMUSG00000098094.8	Scgb2b17	chr7	protein_coding	secretoglobin, family 2B, member 17
chr7	32755432	32755833	-	32755432	32755907	A5SS	0.5	50	50	ENSMUST00000182673.2	ENSMUSG00000098094.8	Scgb2b17	chr7	protein_coding	secretoglobin, family 2B, member 17
chr7	33326004	33326469	-	33326004	33352629	A5SS	0.5	50	50	ENSMUST00000167012.8	ENSMUSG00000083896.9	Scgb2b23-ps	chr7	transcribed_unprocessed_pseudogene	secretoglobin, family 2B, member 23, pseudogene
chr7	33711852	33712598	-	33711604	33712598	A3SS	0.5	50	50	ENSMUST00000085620.9	ENSMUSG00000066584.11	Scgb2b27	chr7	protein_coding	secretoglobin, family 2B, member 27
chr7	33854069	33856668	-	33854069;33855409	33855310;33856668	ES	0.5	50	50	ENSMUST00000102746.11	ENSMUSG00000052997.16	Uba2	chr7	protein_coding	ubiquitin-like modifier activating enzyme 2
chr7	33855409	33857404	-	33855409;33856789	33856668;33857404	ES	0.5	50	50	ENSMUST00000102746.11	ENSMUSG00000052997.16	Uba2	chr7	protein_coding	ubiquitin-like modifier activating enzyme 2
chr7	33864910	33868702	-	33864910	33867798	5pMXE	0.5	50	50	ENSMUST00000102746.11	ENSMUSG00000052997.16	Uba2	chr7	protein_coding	ubiquitin-like modifier activating enzyme 2
chr7	33840891;33841277	33841228;33842163	-	33840891	33842163	cassetteExon	0.5	100	100	ENSMUST00000102746.11	ENSMUSG00000052997.16	Uba2	chr7	protein_coding	ubiquitin-like modifier activating enzyme 2
chr7	33854069;33855409	33855310;33857404	-	33854069;33856789	33856668;33857404	MXE	0.5	100	100	ENSMUST00000175991.8	ENSMUSG00000052997.16	Uba2	chr7	protein_coding	ubiquitin-like modifier activating enzyme 2
chr7	33855409	33857404	-	33855409	33856668	5pMXE	0.5	50	50	ENSMUST00000139916.2	ENSMUSG00000052997.16	Uba2	chr7	protein_coding	ubiquitin-like modifier activating enzyme 2
chr7	33884236	33888774	-	33884236;33885867	33885719;33888774	ES	0.5	50	50	ENSMUST00000002710.10	ENSMUSG00000002635.12	Pdcd2l	chr7	protein_coding	programmed cell death 2-like
chr7	33905069	33928376	-	33905069	33905231	A5SS&ES	0.5	50	50	ENSMUST00000038027.6	ENSMUSG00000036427.6	Gpi1	chr7	protein_coding	glucose-6-phosphate isomerase 1
chr7	33905360	33907116	-	33905360	33907031	A5SS	0.5	50	50	ENSMUST00000038027.6	ENSMUSG00000036427.6	Gpi1	chr7	protein_coding	glucose-6-phosphate isomerase 1
chr7	33907735	33912827	-	33907735	33915381	A5SS	0.5	50	50	ENSMUST00000038027.6	ENSMUSG00000036427.6	Gpi1	chr7	protein_coding	glucose-6-phosphate isomerase 1
chr7	33928798	33928965	-	33928798	33929517	A5SS	0.5	50	50	ENSMUST00000038027.6	ENSMUSG00000036427.6	Gpi1	chr7	protein_coding	glucose-6-phosphate isomerase 1
chr7	33905069	33928376	-	33905069;33905272	33905231;33928376	ES	0.5	50	50	ENSMUST00000205800.2	ENSMUSG00000036427.6	Gpi1	chr7	protein_coding	glucose-6-phosphate isomerase 1
chr7	33963175;34011601	34011514;34012912	-	33963175;33985378	33984127;34012912	MXE	0.5	100	100	ENSMUST00000108074.8	ENSMUSG00000066571.14	Garre1	chr7	protein_coding	granule associated Rac and RHOG effector 1
chr7	33985378;34011601	34011514;34012912	-	33985378	34012912	cassetteExon	0.5	100	100	ENSMUST00000108074.8	ENSMUSG00000066571.14	Garre1	chr7	protein_coding	granule associated Rac and RHOG effector 1
chr7	33940065	33941665	-	33940071	33941665	A3SS	0.5	50	50	ENSMUST00000108074.8	ENSMUSG00000066571.14	Garre1	chr7	protein_coding	granule associated Rac and RHOG effector 1
chr7	33985378	34004813	-	33985378	34012912	A5SS	0.25	50	50	ENSMUST00000108074.8	ENSMUSG00000066571.14	Garre1	chr7	protein_coding	granule associated Rac and RHOG effector 1
chr7	33985378	34012917	-	33985378	34012912	A5SS	0.25	50	50	ENSMUST00000108074.8	ENSMUSG00000066571.14	Garre1	chr7	protein_coding	granule associated Rac and RHOG effector 1
chr7	33963175	34011514	-	33963175	33984127	5pMXE	0.5	50	50	ENSMUST00000085592.6	ENSMUSG00000066571.14	Garre1	chr7	protein_coding	granule associated Rac and RHOG effector 1
chr7	33985378	34011514	-	33963175	34011514	A3SS	0.5	50	50	ENSMUST00000206399.2	ENSMUSG00000066571.14	Garre1	chr7	protein_coding	granule associated Rac and RHOG effector 1
chr7	33985378	34012912	-	34011601	34012912	A3SS&ES	0.5	50	50	ENSMUST00000206399.2	ENSMUSG00000066571.14	Garre1	chr7	protein_coding	granule associated Rac and RHOG effector 1
chr7	33985378	34004813	-	33985378	34012917	A5SS	0.25	50	50	ENSMUST00000206018.2	ENSMUSG00000066571.14	Garre1	chr7	protein_coding	granule associated Rac and RHOG effector 1
chr7	33985378	34011514	-	33985378	34012917	A5SS	0.25	50	50	ENSMUST00000206018.2	ENSMUSG00000066571.14	Garre1	chr7	protein_coding	granule associated Rac and RHOG effector 1
chr7	33985378	34004813	-	33985378	34011514	A5SS	0.25	50	50	ENSMUST00000132975.2	ENSMUSG00000066571.14	Garre1	chr7	protein_coding	granule associated Rac and RHOG effector 1
chr7	34045383	34050711	-	34045383;34047407	34047351;34050711	ES	0.5	50	50	ENSMUST00000085585.12	ENSMUSG00000066568.13	Lsm14a	chr7	protein_coding	LSM14A mRNA processing body assembly factor
chr7	34056921	34065040	-	34056921;34057367	34057191;34065040	ES	0.5	50	50	ENSMUST00000085585.12	ENSMUSG00000066568.13	Lsm14a	chr7	protein_coding	LSM14A mRNA processing body assembly factor
chr7	34074817	34092631	-	34074817	34088783	5pMXE	0.33	50	50	ENSMUST00000085585.12	ENSMUSG00000066568.13	Lsm14a	chr7	protein_coding	LSM14A mRNA processing body assembly factor
chr7	34050942	34052803	-	34050942	34052815	A5SS	0.5	50	50	ENSMUST00000085585.12	ENSMUSG00000066568.13	Lsm14a	chr7	protein_coding	LSM14A mRNA processing body assembly factor
chr7	34074817	34088199	-	34074817	34088783	A5SS	0.33	50	50	ENSMUST00000085585.12	ENSMUSG00000066568.13	Lsm14a	chr7	protein_coding	LSM14A mRNA processing body assembly factor
chr7	34074817	34088199	-	34074817	34092631	A5SS	0.33	50	50	ENSMUST00000206388.2	ENSMUSG00000066568.13	Lsm14a	chr7	protein_coding	LSM14A mRNA processing body assembly factor
chr7	34246748	34255091	+	34243968	34255091	A5SS	0.5	50	50	ENSMUST00000127462.3	ENSMUSG00000086631.3	Gm12784	chr7	lncRNA	predicted gene 12784
chr7	34352107	34354705	-	34352107	34353672	5pMXE	0.25	50	50	ENSMUST00000108069.8	ENSMUSG00000030499.10	Kctd15	chr7	protein_coding	potassium channel tetramerisation domain containing 15
chr7	34349493	34350172	-	34349556	34350172	A3SS	0.5	50	50	ENSMUST00000108069.8	ENSMUSG00000030499.10	Kctd15	chr7	protein_coding	potassium channel tetramerisation domain containing 15
chr7	34344407	34348146	-	34344407	34349381	A5SS	0.5	50	50	ENSMUST00000108069.8	ENSMUSG00000030499.10	Kctd15	chr7	protein_coding	potassium channel tetramerisation domain containing 15
chr7	34352107	34352359	-	34352107	34353672	A5SS	0.25	50	50	ENSMUST00000108069.8	ENSMUSG00000030499.10	Kctd15	chr7	protein_coding	potassium channel tetramerisation domain containing 15
chr7	34352107	34352632	-	34352107	34353672	A5SS	0.25	50	50	ENSMUST00000108069.8	ENSMUSG00000030499.10	Kctd15	chr7	protein_coding	potassium channel tetramerisation domain containing 15
chr7	34352107	34352359	-	34352107	34354705	A5SS	0.25	50	50	ENSMUST00000032709.3	ENSMUSG00000030499.10	Kctd15	chr7	protein_coding	potassium channel tetramerisation domain containing 15
chr7	34352107	34352632	-	34352107	34354705	A5SS	0.25	50	50	ENSMUST00000032709.3	ENSMUSG00000030499.10	Kctd15	chr7	protein_coding	potassium channel tetramerisation domain containing 15
chr7	34352107	34352632	-	34352107	34352359	5pMXE	0.25	50	50	ENSMUST00000127425.4	ENSMUSG00000030499.10	Kctd15	chr7	protein_coding	potassium channel tetramerisation domain containing 15
chr7	34447702	34511771	-	34447702	34452570	5pMXE	0.5	50	50	ENSMUST00000238947.2	ENSMUSG00000060402.9	Chst8	chr7	protein_coding	carbohydrate sulfotransferase 8
chr7	34394572	34447487	-	34376097	34447487	A3SS	0.5	50	50	ENSMUST00000238947.2	ENSMUSG00000060402.9	Chst8	chr7	protein_coding	carbohydrate sulfotransferase 8
chr7	34376097	34511771	-	34376097;34447702	34447487;34511771	ES	0.5	50	50	ENSMUST00000078686.8	ENSMUSG00000060402.9	Chst8	chr7	protein_coding	carbohydrate sulfotransferase 8
chr7	34376097	34511771	-	34376097	34447487	A5SS&ES	0.5	50	50	ENSMUST00000205259.2	ENSMUSG00000060402.9	Chst8	chr7	protein_coding	carbohydrate sulfotransferase 8
chr7	34671128;34679961	34679930;34720390	+	34671128	34720390	cassetteExon	0.5	100	100	ENSMUST00000075068.14	ENSMUSG00000063931.15	Pepd	chr7	protein_coding	peptidase D
chr7	34671128	34720390	+	34671128	34679930	3pMXE	0.5	50	50	ENSMUST00000162509.2	ENSMUSG00000063931.15	Pepd	chr7	protein_coding	peptidase D
chr7	34750357	34755070	-	34750357	34755801	A5SS	0.33	50	50	ENSMUST00000130491.3	ENSMUSG00000056216.10	Cebpg	chr7	protein_coding	CCAAT/enhancer binding protein (C/EBP), gamma
chr7	34750357	34755078	-	34750357	34755801	A5SS	0.33	50	50	ENSMUST00000130491.3	ENSMUSG00000056216.10	Cebpg	chr7	protein_coding	CCAAT/enhancer binding protein (C/EBP), gamma
chr7	34750357	34755078	-	34750357	34755070	A5SS	0.33	50	50	ENSMUST00000070191.10	ENSMUSG00000056216.10	Cebpg	chr7	protein_coding	CCAAT/enhancer binding protein (C/EBP), gamma
chr7	34886075	34896640	+	34886075	34894512	3pMXE	0.5	50	50	ENSMUST00000135452.8	ENSMUSG00000030495.13	Slc7a10	chr7	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 10
chr7	34886075	34896640	+	34886075;34894716	34894512;34896640	ES	0.5	50	50	ENSMUST00000001854.12	ENSMUSG00000030495.13	Slc7a10	chr7	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 10
chr7	34898364	34898965	+	34898364;34898746	34898650;34898965	ES	0.5	50	50	ENSMUST00000001854.12	ENSMUSG00000030495.13	Slc7a10	chr7	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 10
chr7	34898746	34899760	+	34898746	34898965	A3SS&ES	0.5	50	50	ENSMUST00000001854.12	ENSMUSG00000030495.13	Slc7a10	chr7	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 10
chr7	34898364	34898965	+	34898364	34898650	A3SS&ES	0.5	50	50	ENSMUST00000146959.4	ENSMUSG00000030495.13	Slc7a10	chr7	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 10
chr7	34902094	34902354	-	34899840	34902354	A3SS	0.5	50	50	ENSMUST00000153163.2	ENSMUSG00000001802.17	Lrp3	chr7	protein_coding	low density lipoprotein receptor-related protein 3
chr7	34905600	34912565	-	34905600;34910922	34910860;34912565	ES	0.5	50	50	ENSMUST00000122409.8	ENSMUSG00000001802.17	Lrp3	chr7	protein_coding	low density lipoprotein receptor-related protein 3
chr7	35007756	35008726	-	35007764	35008726	A3SS	0.5	50	50	ENSMUST00000079693.12	ENSMUSG00000063808.15	Gpatch1	chr7	protein_coding	G patch domain containing 1
chr7	34976236	34976634	-	34976236	34980757	A5SS	0.5	50	50	ENSMUST00000079693.12	ENSMUSG00000063808.15	Gpatch1	chr7	protein_coding	G patch domain containing 1
chr7	35128723	35131943	+	35128723;35129536	35129340;35131943	ES	0.5	50	50	ENSMUST00000141704.8	ENSMUSG00000023072.15	Cep89	chr7	protein_coding	centrosomal protein 89
chr7	35124197;35124619	35124470;35127025	+	35124197	35127025	cassetteExon	0.5	100	100	ENSMUST00000141704.8	ENSMUSG00000023072.15	Cep89	chr7	protein_coding	centrosomal protein 89
chr7	35117786	35119629	+	35117786	35119672	A3SS	0.5	50	50	ENSMUST00000141704.8	ENSMUSG00000023072.15	Cep89	chr7	protein_coding	centrosomal protein 89
chr7	35096627	35097415	+	35096631	35097415	A5SS	0.5	50	50	ENSMUST00000141704.8	ENSMUSG00000023072.15	Cep89	chr7	protein_coding	centrosomal protein 89
chr7	35120454	35122725	+	35120383	35122725	A5SS	0.5	50	50	ENSMUST00000141704.8	ENSMUSG00000023072.15	Cep89	chr7	protein_coding	centrosomal protein 89
chr7	35128723	35134899	+	35128723;35132032	35131943;35134899	ES	0.5	50	50	ENSMUST00000079414.12	ENSMUSG00000023072.15	Cep89	chr7	protein_coding	centrosomal protein 89
chr7	35096631	35097415	+	35096631	35105043	A3SS	0.5	50	50	ENSMUST00000129064.3	ENSMUSG00000023072.15	Cep89	chr7	protein_coding	centrosomal protein 89
chr7	35102593	35105043	+	35096631	35105043	A5SS	0.5	50	50	ENSMUST00000129064.3	ENSMUSG00000023072.15	Cep89	chr7	protein_coding	centrosomal protein 89
chr7	35120383	35122725	+	35120383	35127025	A3SS	0.5	50	50	ENSMUST00000206230.2	ENSMUSG00000023072.15	Cep89	chr7	protein_coding	centrosomal protein 89
chr7	35124197	35127025	+	35120383	35127025	A5SS	0.33	50	50	ENSMUST00000206230.2	ENSMUSG00000023072.15	Cep89	chr7	protein_coding	centrosomal protein 89
chr7	35124619	35127025	+	35120383	35127025	A5SS	0.33	50	50	ENSMUST00000206230.2	ENSMUSG00000023072.15	Cep89	chr7	protein_coding	centrosomal protein 89
chr7	35128723	35134899	+	35128723	35131943	3pMXE	0.33	50	50	ENSMUST00000140418.3	ENSMUSG00000023072.15	Cep89	chr7	protein_coding	centrosomal protein 89
chr7	35128723	35129340	+	35128723	35134899	A3SS	0.33	50	50	ENSMUST00000150421.2	ENSMUSG00000023072.15	Cep89	chr7	protein_coding	centrosomal protein 89
chr7	35148571	35149175	+	35148571;35148879	35148774;35149175	ES	0.5	50	50	ENSMUST00000118383.8	ENSMUSG00000030492.17	Slc7a9	chr7	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 9
chr7	35149311	35152819	+	35149311;35151941	35151794;35152819	ES	0.5	50	50	ENSMUST00000118383.8	ENSMUSG00000030492.17	Slc7a9	chr7	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 9
chr7	35148571	35149175	+	35148879	35149175	5pMXE	0.5	50	50	ENSMUST00000032703.10	ENSMUSG00000030492.17	Slc7a9	chr7	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 9
chr7	35189540	35193255	-	35189540;35190680	35190606;35193255	ES	0.5	50	50	ENSMUST00000193633.6	ENSMUSG00000030491.17	Tdrd12	chr7	protein_coding	tudor domain containing 12
chr7	35223499	35236939	-	35223499;35228696	35228538;35236939	ES	0.5	50	50	ENSMUST00000193633.6	ENSMUSG00000030491.17	Tdrd12	chr7	protein_coding	tudor domain containing 12
chr7	35185962	35186579	-	35184850	35186579	A3SS	0.5	50	50	ENSMUST00000193633.6	ENSMUSG00000030491.17	Tdrd12	chr7	protein_coding	tudor domain containing 12
chr7	35193356	35193696	-	35193362	35193696	A3SS	0.5	50	50	ENSMUST00000193633.6	ENSMUSG00000030491.17	Tdrd12	chr7	protein_coding	tudor domain containing 12
chr7	35184850	35185025	-	35184850	35186579	A5SS	0.5	50	50	ENSMUST00000193633.6	ENSMUSG00000030491.17	Tdrd12	chr7	protein_coding	tudor domain containing 12
chr7	35250967	35254579	-	35251086	35254579	A3SS	0.5	50	50	ENSMUST00000040962.6	ENSMUSG00000034875.6	Nudt19	chr7	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 19
chr7	35291307	35300915	+	35291307;35299850	35299740;35300915	ES	0.5	50	50	ENSMUST00000040844.16	ENSMUSG00000034867.17	Ankrd27	chr7	protein_coding	ankyrin repeat domain 27 (VPS9 domain)
chr7	35320087	35325072	+	35320087;35321774	35321730;35325072	ES	0.5	50	50	ENSMUST00000040844.16	ENSMUSG00000034867.17	Ankrd27	chr7	protein_coding	ankyrin repeat domain 27 (VPS9 domain)
chr7	35299850	35300931	+	35299850	35300915	A3SS	0.5	50	50	ENSMUST00000040844.16	ENSMUSG00000034867.17	Ankrd27	chr7	protein_coding	ankyrin repeat domain 27 (VPS9 domain)
chr7	35332473	35333375	+	35332473	35335656	A3SS	0.5	50	50	ENSMUST00000040844.16	ENSMUSG00000034867.17	Ankrd27	chr7	protein_coding	ankyrin repeat domain 27 (VPS9 domain)
chr7	35307883	35311888	+	35307878	35311888	A5SS	0.5	50	50	ENSMUST00000040844.16	ENSMUSG00000034867.17	Ankrd27	chr7	protein_coding	ankyrin repeat domain 27 (VPS9 domain)
chr7	35291307	35300915	+	35291307	35299740	A3SS&ES	0.5	50	50	ENSMUST00000206157.2	ENSMUSG00000034867.17	Ankrd27	chr7	protein_coding	ankyrin repeat domain 27 (VPS9 domain)
chr7	35320087;35325191	35325072;35326829	+	35320087	35326829	cassetteExon	0.5	100	100	ENSMUST00000190503.7	ENSMUSG00000034867.17	Ankrd27	chr7	protein_coding	ankyrin repeat domain 27 (VPS9 domain)
chr7	35318937	35321730	+	35318937	35319783	A3SS&ES	0.5	50	50	ENSMUST00000190503.7	ENSMUSG00000034867.17	Ankrd27	chr7	protein_coding	ankyrin repeat domain 27 (VPS9 domain)
chr7	35320087	35321730	+	35320087	35326829	A3SS	0.33	50	50	ENSMUST00000190503.7	ENSMUSG00000034867.17	Ankrd27	chr7	protein_coding	ankyrin repeat domain 27 (VPS9 domain)
chr7	35318937;35320087	35319783;35321730	+	35318937	35321730	cassetteExon	0.5	100	100	ENSMUST00000187807.2	ENSMUSG00000034867.17	Ankrd27	chr7	protein_coding	ankyrin repeat domain 27 (VPS9 domain)
chr7	35318937;35320087	35319783;35325072	+	35318937;35321774	35321730;35325072	MXE	0.5	100	100	ENSMUST00000187807.2	ENSMUSG00000034867.17	Ankrd27	chr7	protein_coding	ankyrin repeat domain 27 (VPS9 domain)
chr7	35318937;35320087	35319783;35326829	+	35318937;35325191	35321730;35326829	MXE	0.5	100	100	ENSMUST00000187807.2	ENSMUSG00000034867.17	Ankrd27	chr7	protein_coding	ankyrin repeat domain 27 (VPS9 domain)
chr7	35345606	35346306	-	35345606	35346731	A5SS	0.33	50	50	ENSMUST00000118501.8	ENSMUSG00000030417.16	Pdcd5	chr7	protein_coding	programmed cell death 5
chr7	35345606	35346727	-	35345606	35346731	A5SS	0.33	50	50	ENSMUST00000118501.8	ENSMUSG00000030417.16	Pdcd5	chr7	protein_coding	programmed cell death 5
chr7	35345606	35346727	-	35345606	35346306	5pMXE	0.33	50	50	ENSMUST00000120714.2	ENSMUSG00000030417.16	Pdcd5	chr7	protein_coding	programmed cell death 5
chr7	35394839	35406806	-	35394839;35402996	35402914;35406806	ES	0.5	50	50	ENSMUST00000051377.15	ENSMUSG00000043671.15	Dpy19l3	chr7	protein_coding	dpy-19-like 3 (C. elegans)
chr7	35421104	35424716	-	35421104;35422255	35422132;35424716	ES	0.5	50	50	ENSMUST00000051377.15	ENSMUSG00000043671.15	Dpy19l3	chr7	protein_coding	dpy-19-like 3 (C. elegans)
chr7	35416143;35419051	35418972;35420970	-	35416143	35420970	cassetteExon	0.5	100	100	ENSMUST00000051377.15	ENSMUSG00000043671.15	Dpy19l3	chr7	protein_coding	dpy-19-like 3 (C. elegans)
chr7	35429197	35449165	-	35429201	35449165	A3SS	0.5	50	50	ENSMUST00000051377.15	ENSMUSG00000043671.15	Dpy19l3	chr7	protein_coding	dpy-19-like 3 (C. elegans)
chr7	35421104	35424716	-	35421104	35422132	5pMXE	0.5	50	50	ENSMUST00000127782.3	ENSMUSG00000043671.15	Dpy19l3	chr7	protein_coding	dpy-19-like 3 (C. elegans)
chr7	35416143	35420970	-	35419051	35420970	3pMXE	0.5	50	50	ENSMUST00000205751.2	ENSMUSG00000043671.15	Dpy19l3	chr7	protein_coding	dpy-19-like 3 (C. elegans)
chr7	35491187	35500863	-	35491187;35495043	35492948;35500863	ES	0.5	50	50	ENSMUST00000061586.11	ENSMUSG00000044452.11	Zfp507	chr7	protein_coding	zinc finger protein 507
chr7	35491187	35494721	-	35491187	35492948	A5SS	0.33	50	50	ENSMUST00000061586.11	ENSMUSG00000044452.11	Zfp507	chr7	protein_coding	zinc finger protein 507
chr7	35491187	35500863	-	35491187	35492948	5pMXE	0.33	50	50	ENSMUST00000206615.2	ENSMUSG00000044452.11	Zfp507	chr7	protein_coding	zinc finger protein 507
chr7	35491187;35495043	35494721;35500863	-	35491187	35500863	cassetteExon	0.5	100	100	ENSMUST00000187282.3	ENSMUSG00000044452.11	Zfp507	chr7	protein_coding	zinc finger protein 507
chr7	36397714	36401181	+	36397714	36468053	A3SS	0.5	50	50	ENSMUST00000021641.8	ENSMUSG00000021217.8	Tshz3	chr7	protein_coding	teashirt zinc finger family member 3
chr7	37173394	37178706	-	37020525	37178706	A3SS	0.5	50	50	ENSMUST00000206763.3	ENSMUSG00000043456.18	Zfp536	chr7	protein_coding	zinc finger protein 536
chr7	37416067	37469021	-	37416067;37433541	37433407;37469021	ES	0.5	50	50	ENSMUST00000175941.8	ENSMUSG00000043456.18	Zfp536	chr7	protein_coding	zinc finger protein 536
chr7	37410355	37415998	-	37349222	37415998	A3SS	0.5	50	50	ENSMUST00000175941.8	ENSMUSG00000043456.18	Zfp536	chr7	protein_coding	zinc finger protein 536
chr7	37416067	37470065	-	37416067	37469021	5pMXE	0.16	50	50	ENSMUST00000056338.13	ENSMUSG00000043456.18	Zfp536	chr7	protein_coding	zinc finger protein 536
chr7	37416067	37470306	-	37416067	37469021	5pMXE	0.16	50	50	ENSMUST00000056338.13	ENSMUSG00000043456.18	Zfp536	chr7	protein_coding	zinc finger protein 536
chr7	37416067	37472115	-	37416067	37469021	5pMXE	0.16	50	50	ENSMUST00000056338.13	ENSMUSG00000043456.18	Zfp536	chr7	protein_coding	zinc finger protein 536
chr7	37416067	37472874	-	37416067	37469021	5pMXE	0.16	50	50	ENSMUST00000056338.13	ENSMUSG00000043456.18	Zfp536	chr7	protein_coding	zinc finger protein 536
chr7	37416067	37472115	-	37416067	37470306	5pMXE	0.16	50	50	ENSMUST00000176114.8	ENSMUSG00000043456.18	Zfp536	chr7	protein_coding	zinc finger protein 536
chr7	37416067	37472874	-	37416067	37470306	5pMXE	0.16	50	50	ENSMUST00000176114.8	ENSMUSG00000043456.18	Zfp536	chr7	protein_coding	zinc finger protein 536
chr7	37416067	37433407	-	37416067	37470306	A5SS	0.16	50	50	ENSMUST00000176114.8	ENSMUSG00000043456.18	Zfp536	chr7	protein_coding	zinc finger protein 536
chr7	37416067	37470065	-	37416067	37470306	A5SS	0.16	50	50	ENSMUST00000176114.8	ENSMUSG00000043456.18	Zfp536	chr7	protein_coding	zinc finger protein 536
chr7	37416067	37472874	-	37416067	37472115	5pMXE	0.16	50	50	ENSMUST00000176205.8	ENSMUSG00000043456.18	Zfp536	chr7	protein_coding	zinc finger protein 536
chr7	37416067	37433407	-	37416067	37472115	A5SS	0.16	50	50	ENSMUST00000176205.8	ENSMUSG00000043456.18	Zfp536	chr7	protein_coding	zinc finger protein 536
chr7	37416067	37470065	-	37416067	37472115	A5SS	0.16	50	50	ENSMUST00000176205.8	ENSMUSG00000043456.18	Zfp536	chr7	protein_coding	zinc finger protein 536
chr7	37416067	37472874	-	37416067	37470065	5pMXE	0.16	50	50	ENSMUST00000176680.8	ENSMUSG00000043456.18	Zfp536	chr7	protein_coding	zinc finger protein 536
chr7	37416067	37433407	-	37416067	37470065	A5SS	0.16	50	50	ENSMUST00000176680.8	ENSMUSG00000043456.18	Zfp536	chr7	protein_coding	zinc finger protein 536
chr7	37416067	37433407	-	37416067	37472874	A5SS	0.16	50	50	ENSMUST00000176534.8	ENSMUSG00000043456.18	Zfp536	chr7	protein_coding	zinc finger protein 536
chr7	37666914	37669031	-	37666914;37668862	37668805;37669031	ES	0.5	50	50	ENSMUST00000085513.6	ENSMUSG00000030421.10	Uri1	chr7	protein_coding	URI1, prefoldin-like chaperone
chr7	37696146	37722860	-	37696146	37718535	5pMXE	0.33	50	50	ENSMUST00000085513.6	ENSMUSG00000030421.10	Uri1	chr7	protein_coding	URI1, prefoldin-like chaperone
chr7	37661028	37661891	-	37661122	37661891	A3SS	0.5	50	50	ENSMUST00000085513.6	ENSMUSG00000030421.10	Uri1	chr7	protein_coding	URI1, prefoldin-like chaperone
chr7	37665004	37665113	-	37665004	37666746	A5SS	0.5	50	50	ENSMUST00000085513.6	ENSMUSG00000030421.10	Uri1	chr7	protein_coding	URI1, prefoldin-like chaperone
chr7	37696146	37718851	-	37696146	37718535	A5SS	0.33	50	50	ENSMUST00000085513.6	ENSMUSG00000030421.10	Uri1	chr7	protein_coding	URI1, prefoldin-like chaperone
chr7	37696146	37718851	-	37696146	37722860	A5SS	0.33	50	50	ENSMUST00000206581.2	ENSMUSG00000030421.10	Uri1	chr7	protein_coding	URI1, prefoldin-like chaperone
chr7	37882946;37883324	37883142;37888031	+	37882946	37888031	cassetteExon	0.5	100	100	ENSMUST00000178207.10	ENSMUSG00000054676.18	1600014C10Rik	chr7	protein_coding	RIKEN cDNA 1600014C10 gene
chr7	37882946;37883450	37883142;37888031	+	37882946	37888031	cassetteExon	0.5	100	100	ENSMUST00000178207.10	ENSMUSG00000054676.18	1600014C10Rik	chr7	protein_coding	RIKEN cDNA 1600014C10 gene
chr7	37882951	37888031	+	37882946	37888031	A5SS	0.2	50	50	ENSMUST00000178207.10	ENSMUSG00000054676.18	1600014C10Rik	chr7	protein_coding	RIKEN cDNA 1600014C10 gene
chr7	37885745	37888031	+	37882946	37888031	A5SS	0.2	50	50	ENSMUST00000178207.10	ENSMUSG00000054676.18	1600014C10Rik	chr7	protein_coding	RIKEN cDNA 1600014C10 gene
chr7	37882946	37888031	+	37882946	37883142	3pMXE	0.5	50	50	ENSMUST00000178890.2	ENSMUSG00000054676.18	1600014C10Rik	chr7	protein_coding	RIKEN cDNA 1600014C10 gene
chr7	37883324	37888031	+	37882951	37888031	A5SS	0.2	50	50	ENSMUST00000179525.10	ENSMUSG00000054676.18	1600014C10Rik	chr7	protein_coding	RIKEN cDNA 1600014C10 gene
chr7	37883450	37888031	+	37882951	37888031	A5SS	0.2	50	50	ENSMUST00000179525.10	ENSMUSG00000054676.18	1600014C10Rik	chr7	protein_coding	RIKEN cDNA 1600014C10 gene
chr7	37885745	37888031	+	37882951	37888031	A5SS	0.2	50	50	ENSMUST00000179525.10	ENSMUSG00000054676.18	1600014C10Rik	chr7	protein_coding	RIKEN cDNA 1600014C10 gene
chr7	37882946	37888031	+	37883324	37888031	5pMXE	0.2	50	50	ENSMUST00000178876.10	ENSMUSG00000054676.18	1600014C10Rik	chr7	protein_coding	RIKEN cDNA 1600014C10 gene
chr7	37883450	37888031	+	37883324	37888031	A5SS	0.2	50	50	ENSMUST00000178876.10	ENSMUSG00000054676.18	1600014C10Rik	chr7	protein_coding	RIKEN cDNA 1600014C10 gene
chr7	37885745	37888031	+	37883324	37888031	A5SS	0.2	50	50	ENSMUST00000178876.10	ENSMUSG00000054676.18	1600014C10Rik	chr7	protein_coding	RIKEN cDNA 1600014C10 gene
chr7	37882946	37888031	+	37883450	37888031	5pMXE	0.2	50	50	ENSMUST00000179992.10	ENSMUSG00000054676.18	1600014C10Rik	chr7	protein_coding	RIKEN cDNA 1600014C10 gene
chr7	37885745	37888031	+	37883450	37888031	A5SS	0.2	50	50	ENSMUST00000179992.10	ENSMUSG00000054676.18	1600014C10Rik	chr7	protein_coding	RIKEN cDNA 1600014C10 gene
chr7	37967019;37968083	37967895;37968326	-	37967019	37968326	cassetteExon	0.5	100	100	ENSMUST00000032585.8	ENSMUSG00000030423.8	Pop4	chr7	protein_coding	processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)
chr7	37967019;37968083	37968029;37968326	-	37967019	37968326	cassetteExon	0.5	100	100	ENSMUST00000032585.8	ENSMUSG00000030423.8	Pop4	chr7	protein_coding	processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)
chr7	37967019;37968146	37967895;37968326	-	37967019	37968326	cassetteExon	0.5	100	100	ENSMUST00000032585.8	ENSMUSG00000030423.8	Pop4	chr7	protein_coding	processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)
chr7	37967019;37968146	37968029;37968326	-	37967019	37968326	cassetteExon	0.5	100	100	ENSMUST00000032585.8	ENSMUSG00000030423.8	Pop4	chr7	protein_coding	processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)
chr7	37968146	37968326	-	37968083	37968326	A3SS	0.33	50	50	ENSMUST00000206221.2	ENSMUSG00000030423.8	Pop4	chr7	protein_coding	processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)
chr7	37967019	37968029	-	37967019	37967895	A5SS	0.33	50	50	ENSMUST00000206221.2	ENSMUSG00000030423.8	Pop4	chr7	protein_coding	processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)
chr7	38116290	38141663	+	38116290;38129232	38129161;38141663	ES	0.5	50	50	ENSMUST00000185556.7	ENSMUSG00000101708.7	Gm28453	chr7	transcribed_processed_pseudogene	predicted gene 28453
chr7	38141732	38142000	+	38141787	38142000	A5SS	0.5	50	50	ENSMUST00000185556.7	ENSMUSG00000101708.7	Gm28453	chr7	transcribed_processed_pseudogene	predicted gene 28453
chr7	39116858	39122286	+	39116858;39120930	39120821;39122286	ES	0.5	50	50	ENSMUST00000186855.6	ENSMUSG00000030424.16	Zfp939	chr7	transcribed_unprocessed_pseudogene	zinc finger protein 939
chr7	39202035	39202652	+	39193928	39202652	A5SS	0.5	50	50	ENSMUST00000190789.3	ENSMUSG00000108621.2	Gm33989	chr7	lncRNA	predicted gene, 33989
chr7	39213486	39214479	+	39213486	39214291	A3SS	0.5	50	50	ENSMUST00000188038.3	ENSMUSG00000108621.2	Gm33989	chr7	lncRNA	predicted gene, 33989
chr7	39441374	39446956	-	39437753	39446956	A3SS	0.25	50	50	ENSMUST00000209884.2	ENSMUSG00000110135.2	Gm45839	chr7	lncRNA	predicted gene 45839
chr7	39444928	39446956	-	39437753	39446956	A3SS	0.25	50	50	ENSMUST00000209884.2	ENSMUSG00000110135.2	Gm45839	chr7	lncRNA	predicted gene 45839
chr7	39446778	39446956	-	39437753	39446956	A3SS	0.25	50	50	ENSMUST00000209884.2	ENSMUSG00000110135.2	Gm45839	chr7	lncRNA	predicted gene 45839
chr7	39520777;39521851	39521753;39559558	-	39520777	39559558	cassetteExon	0.5	100	100	ENSMUST00000210759.2	ENSMUSG00000102085.3	4930435C17Rik	chr7	lncRNA	RIKEN cDNA 4930435C17 gene
chr7	39520777;39540328	39540108;39559558	-	39520777	39559558	cassetteExon	0.5	100	100	ENSMUST00000210759.2	ENSMUSG00000102085.3	4930435C17Rik	chr7	lncRNA	RIKEN cDNA 4930435C17 gene
chr7	39519308	39520664	-	39439014	39520664	A3SS	0.5	50	50	ENSMUST00000210759.2	ENSMUSG00000102085.3	4930435C17Rik	chr7	lncRNA	RIKEN cDNA 4930435C17 gene
chr7	39520785	39559558	-	39520777	39559558	A3SS	0.16	50	50	ENSMUST00000210759.2	ENSMUSG00000102085.3	4930435C17Rik	chr7	lncRNA	RIKEN cDNA 4930435C17 gene
chr7	39553343	39559558	-	39520777	39559558	A3SS	0.16	50	50	ENSMUST00000210759.2	ENSMUSG00000102085.3	4930435C17Rik	chr7	lncRNA	RIKEN cDNA 4930435C17 gene
chr7	39553343	39560009	-	39559675	39560009	A3SS&ES	0.33	50	50	ENSMUST00000210759.2	ENSMUSG00000102085.3	4930435C17Rik	chr7	lncRNA	RIKEN cDNA 4930435C17 gene
chr7	39557391	39559558	-	39520777	39559558	A3SS	0.16	50	50	ENSMUST00000210759.2	ENSMUSG00000102085.3	4930435C17Rik	chr7	lncRNA	RIKEN cDNA 4930435C17 gene
chr7	39559871	39560009	-	39559675	39560009	A3SS	0.33	50	50	ENSMUST00000210759.2	ENSMUSG00000102085.3	4930435C17Rik	chr7	lncRNA	RIKEN cDNA 4930435C17 gene
chr7	39520777	39559565	-	39520777	39559558	A5SS	0.25	50	50	ENSMUST00000210759.2	ENSMUSG00000102085.3	4930435C17Rik	chr7	lncRNA	RIKEN cDNA 4930435C17 gene
chr7	39559675	39560271	-	39559675	39560009	A5SS	0.5	50	50	ENSMUST00000210759.2	ENSMUSG00000102085.3	4930435C17Rik	chr7	lncRNA	RIKEN cDNA 4930435C17 gene
chr7	39521851	39559558	-	39520785	39559558	A3SS	0.16	50	50	ENSMUST00000209360.2	ENSMUSG00000102085.3	4930435C17Rik	chr7	lncRNA	RIKEN cDNA 4930435C17 gene
chr7	39540328	39559558	-	39520785	39559558	A3SS	0.16	50	50	ENSMUST00000209360.2	ENSMUSG00000102085.3	4930435C17Rik	chr7	lncRNA	RIKEN cDNA 4930435C17 gene
chr7	39553343	39559558	-	39520785	39559558	A3SS	0.16	50	50	ENSMUST00000209360.2	ENSMUSG00000102085.3	4930435C17Rik	chr7	lncRNA	RIKEN cDNA 4930435C17 gene
chr7	39557391	39559558	-	39520785	39559558	A3SS	0.16	50	50	ENSMUST00000209360.2	ENSMUSG00000102085.3	4930435C17Rik	chr7	lncRNA	RIKEN cDNA 4930435C17 gene
chr7	39444928	39446956	-	39441374	39446956	A3SS	0.25	50	50	ENSMUST00000211456.2	ENSMUSG00000100431.3	4930558N11Rik	chr7	lncRNA	RIKEN cDNA 4930558N11 gene
chr7	39446778	39446956	-	39441374	39446956	A3SS	0.25	50	50	ENSMUST00000211456.2	ENSMUSG00000100431.3	4930558N11Rik	chr7	lncRNA	RIKEN cDNA 4930558N11 gene
chr7	39446778	39446956	-	39444928	39446956	A3SS	0.25	50	50	ENSMUST00000211512.2	ENSMUSG00000100431.3	4930558N11Rik	chr7	lncRNA	RIKEN cDNA 4930558N11 gene
chr7	39520777	39521753	-	39520777	39559565	A5SS	0.25	50	50	ENSMUST00000209615.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39520777	39540108	-	39520777	39559565	A5SS	0.25	50	50	ENSMUST00000209615.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39520777;39540328	39540108;39559558	-	39520777;39521851	39521753;39559558	MXE	0.5	100	100	ENSMUST00000209680.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39553343	39559558	-	39521851	39559558	A3SS	0.16	50	50	ENSMUST00000209680.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39557391	39559558	-	39521851	39559558	A3SS	0.16	50	50	ENSMUST00000209680.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39553343	39559558	-	39540328	39559558	A3SS	0.16	50	50	ENSMUST00000210787.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39557391	39559558	-	39540328	39559558	A3SS	0.16	50	50	ENSMUST00000210787.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39520777	39559558	-	39521851	39559558	3pMXE	0.16	50	50	ENSMUST00000210270.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39540328	39559558	-	39521851	39559558	A3SS	0.16	50	50	ENSMUST00000210270.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39553343	39564316	-	39553343	39560009	5pMXE	0.14	50	50	ENSMUST00000189000.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39553343	39570956	-	39553343	39560009	5pMXE	0.14	50	50	ENSMUST00000189000.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39553343;39559675	39559558;39560009	-	39553343	39560009	cassetteExon	0.5	100	100	ENSMUST00000189000.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39553343;39559871	39559558;39560009	-	39553343	39560009	cassetteExon	0.5	100	100	ENSMUST00000189000.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39553343;39559871	39559704;39560009	-	39553343	39560009	cassetteExon	0.5	100	100	ENSMUST00000189000.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39553343	39557208	-	39553343	39560009	A5SS	0.14	50	50	ENSMUST00000189000.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39553343	39560271	-	39553343	39560009	A5SS	0.14	50	50	ENSMUST00000189000.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39579844	39627348	-	39579844;39588248	39588205;39627348	ES	0.33	50	50	ENSMUST00000211126.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39553343;39564777	39564316;39570956	-	39553343	39570956	cassetteExon	0.5	100	100	ENSMUST00000211126.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39579844;39580121	39579950;39588205	-	39579844	39588205	cassetteExon	0.5	100	100	ENSMUST00000211126.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39574504	39577657	-	39571082	39577657	A3SS	0.5	50	50	ENSMUST00000211126.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39553343	39557208	-	39553343	39570956	A5SS	0.14	50	50	ENSMUST00000211126.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39553343	39559558	-	39553343	39570956	A5SS	0.14	50	50	ENSMUST00000211126.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39553343	39559704	-	39553343	39570956	A5SS	0.14	50	50	ENSMUST00000211126.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39553343	39560271	-	39553343	39570956	A5SS	0.14	50	50	ENSMUST00000211126.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39588248	39627653	-	39588248	39627348	A5SS	0.5	50	50	ENSMUST00000211126.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39553343	39557208	-	39553343	39564316	A5SS	0.14	50	50	ENSMUST00000210906.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39553343	39559558	-	39553343	39564316	A5SS	0.14	50	50	ENSMUST00000210906.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39553343	39559704	-	39553343	39564316	A5SS	0.14	50	50	ENSMUST00000210906.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39553343	39560271	-	39553343	39564316	A5SS	0.14	50	50	ENSMUST00000210906.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39579844	39579950	-	39579844	39627348	A5SS	0.33	50	50	ENSMUST00000210906.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39553343;39559675	39559558;39560271	-	39553343	39560271	cassetteExon	0.5	100	100	ENSMUST00000185997.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39553343	39557208	-	39553343	39560271	A5SS	0.14	50	50	ENSMUST00000185997.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39553343	39559704	-	39553343	39560271	A5SS	0.14	50	50	ENSMUST00000185997.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39553343	39559558	-	39553343;39557391	39557208;39559558	ES	0.5	50	50	ENSMUST00000210716.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39553343;39559871	39559704;39560009	-	39553343;39559675	39557208;39560009	MXE	0.5	100	100	ENSMUST00000210716.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39553343;39559675	39559558;39560009	-	39553343;39559871	39559704;39560009	MXE	0.5	100	100	ENSMUST00000188287.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39553343	39557208	-	39553343	39559704	A5SS	0.2	50	50	ENSMUST00000188287.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39571082;39627558	39627348;39627653	-	39571082;39588248	39577657;39627653	MXE	0.5	100	100	ENSMUST00000209313.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39579844;39627558	39627348;39627653	-	39579844;39588248	39579950;39627653	MXE	0.5	100	100	ENSMUST00000209313.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39588248;39627558	39627348;39627653	-	39588248	39627653	cassetteExon	0.5	100	100	ENSMUST00000209313.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39579844	39627348	-	39571082	39627348	A3SS	0.33	50	50	ENSMUST00000210401.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39588248	39627348	-	39571082	39627348	A3SS	0.33	50	50	ENSMUST00000210401.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39588248	39627653	-	39627558	39627653	A3SS&ES	0.5	50	50	ENSMUST00000210401.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39571082	39577657	-	39571082	39627348	A5SS	0.5	50	50	ENSMUST00000210401.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39553343	39559704	-	39553343	39559558	A5SS&ES	0.2	50	50	ENSMUST00000209459.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39553343	39560009	-	39553343	39559558	A5SS&ES	0.2	50	50	ENSMUST00000209459.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	39553343	39560271	-	39553343	39559558	A5SS&ES	0.2	50	50	ENSMUST00000185203.2	ENSMUSG00000109083.3	Gm44992	chr7	lncRNA	predicted gene 44992
chr7	40324395;40327012	40326811;40332478	+	40324395	40332478	cassetteExon	0.5	100	100	ENSMUST00000206289.2	ENSMUSG00000102004.4	4933402C06Rik	chr7	lncRNA	RIKEN cDNA 4933402C06 gene
chr7	40332685	40335586	+	40332685	40340330	A3SS	0.5	50	50	ENSMUST00000190160.2	ENSMUSG00000102004.4	4933402C06Rik	chr7	lncRNA	RIKEN cDNA 4933402C06 gene
chr7	40337138	40340330	+	40332685	40340330	A5SS	0.5	50	50	ENSMUST00000190160.2	ENSMUSG00000102004.4	4933402C06Rik	chr7	lncRNA	RIKEN cDNA 4933402C06 gene
chr7	40500924	40523558	-	40469284	40523558	A3SS	0.5	50	50	ENSMUST00000189574.7	ENSMUSG00000100600.7	A230077H06Rik	chr7	lncRNA	RIKEN cDNA A230077H06 gene
chr7	40525162	40547623	-	40525162	40550197	A5SS	0.5	50	50	ENSMUST00000189574.7	ENSMUSG00000100600.7	A230077H06Rik	chr7	lncRNA	RIKEN cDNA A230077H06 gene
chr7	40525159	40547623	-	40525162	40547623	A3SS	0.5	50	50	ENSMUST00000188579.7	ENSMUSG00000100600.7	A230077H06Rik	chr7	lncRNA	RIKEN cDNA A230077H06 gene
chr7	40549612;40550319	40550200;40551854	+	40549612;40550703	40550674;40551854	MXE	0.5	100	100	ENSMUST00000044705.12	ENSMUSG00000039257.12	Vstm2b	chr7	protein_coding	V-set and transmembrane domain containing 2B
chr7	40549612	40551917	+	40549612	40550674	A3SS&ES	0.33	50	50	ENSMUST00000044705.12	ENSMUSG00000039257.12	Vstm2b	chr7	protein_coding	V-set and transmembrane domain containing 2B
chr7	40549612	40550200	+	40549612	40551917	A3SS	0.33	50	50	ENSMUST00000206223.2	ENSMUSG00000039257.12	Vstm2b	chr7	protein_coding	V-set and transmembrane domain containing 2B
chr7	40637136	40642340	+	40637136;40639345	40639073;40642340	ES	0.5	50	50	ENSMUST00000206529.2	ENSMUSG00000091692.3	4930433I11Rik	chr7	protein_coding	RIKEN cDNA 4930433I11 gene
chr7	40738761	40738963	-	40737423	40738963	A3SS	0.5	50	50	ENSMUST00000205487.2	ENSMUSG00000108490.2	1700110I07Rik	chr7	lncRNA	RIKEN cDNA 1700110I07 gene
chr7	40933902	40935507	+	40803300	40935507	A5SS	0.5	50	50	ENSMUST00000206490.2	ENSMUSG00000072259.4	Gm5592	chr7	protein_coding	predicted gene 5592
chr7	41026296;41037679	41037532;41042651	-	41026296	41042651	cassetteExon	0.5	100	100	ENSMUST00000071804.10	ENSMUSG00000056383.11	AI987944	chr7	protein_coding	expressed sequence AI987944
chr7	41050087	41074402	-	41050087;41060402	41060279;41074402	ES	0.5	50	50	ENSMUST00000233793.2	ENSMUSG00000066537.6	Vmn2r57	chr7	protein_coding	vomeronasal 2, receptor 57
chr7	41076935	41077956	-	41077663	41077956	A3SS	0.33	50	50	ENSMUST00000233793.2	ENSMUSG00000066537.6	Vmn2r57	chr7	protein_coding	vomeronasal 2, receptor 57
chr7	41077600	41077956	-	41077663	41077956	A3SS	0.33	50	50	ENSMUST00000233793.2	ENSMUSG00000066537.6	Vmn2r57	chr7	protein_coding	vomeronasal 2, receptor 57
chr7	41078195	41097857	-	41078247	41097857	A3SS	0.5	50	50	ENSMUST00000233793.2	ENSMUSG00000066537.6	Vmn2r57	chr7	protein_coding	vomeronasal 2, receptor 57
chr7	41076935	41077956	-	41077600	41077956	A3SS	0.33	50	50	ENSMUST00000233555.2	ENSMUSG00000066537.6	Vmn2r57	chr7	protein_coding	vomeronasal 2, receptor 57
chr7	41132383	41148718	-	41108365	41148718	A3SS	0.25	50	50	ENSMUST00000094532.4	ENSMUSG00000092592.2	Gm20449	chr7	protein_coding	predicted gene 20449
chr7	41140492	41148718	-	41108365	41148718	A3SS	0.25	50	50	ENSMUST00000094532.4	ENSMUSG00000092592.2	Gm20449	chr7	protein_coding	predicted gene 20449
chr7	41140886	41148718	-	41108365	41148718	A3SS	0.25	50	50	ENSMUST00000094532.4	ENSMUSG00000092592.2	Gm20449	chr7	protein_coding	predicted gene 20449
chr7	41140492	41148718	-	41132383	41148718	A3SS	0.33	50	50	ENSMUST00000098509.5	ENSMUSG00000074166.8	AW146154	chr7	protein_coding	expressed sequence AW146154
chr7	41140886	41148718	-	41132383	41148718	A3SS	0.33	50	50	ENSMUST00000098509.5	ENSMUSG00000074166.8	AW146154	chr7	protein_coding	expressed sequence AW146154
chr7	41140886	41148718	-	41140492	41148718	A3SS	0.25	50	50	ENSMUST00000205995.2	ENSMUSG00000074166.8	AW146154	chr7	protein_coding	expressed sequence AW146154
chr7	41197200	41210138	-	41197200;41197534	41197408;41210138	ES	0.5	50	50	ENSMUST00000073410.12	ENSMUSG00000090744.8	Gm6871	chr7	protein_coding	predicted gene 6871
chr7	41197534	41222763	-	41197534	41210138	5pMXE	0.5	50	50	ENSMUST00000073410.12	ENSMUSG00000090744.8	Gm6871	chr7	protein_coding	predicted gene 6871
chr7	41211662	41222763	-	41197534	41222763	A3SS	0.5	50	50	ENSMUST00000110214.9	ENSMUSG00000090744.8	Gm6871	chr7	protein_coding	predicted gene 6871
chr7	41197200	41210138	-	41197200	41197408	A5SS&ES	0.5	50	50	ENSMUST00000110214.9	ENSMUSG00000090744.8	Gm6871	chr7	protein_coding	predicted gene 6871
chr7	41248824	41261100	+	41248824;41252958	41252860;41261100	ES	0.5	50	50	ENSMUST00000205587.2	ENSMUSG00000091474.3	2610021A01Rik	chr7	protein_coding	RIKEN cDNA 2610021A01 gene
chr7	41248824	41251172	+	41248824	41252860	A3SS	0.33	50	50	ENSMUST00000205587.2	ENSMUSG00000091474.3	2610021A01Rik	chr7	protein_coding	RIKEN cDNA 2610021A01 gene
chr7	41252421	41252860	+	41248824	41252860	A5SS	0.5	50	50	ENSMUST00000205587.2	ENSMUSG00000091474.3	2610021A01Rik	chr7	protein_coding	RIKEN cDNA 2610021A01 gene
chr7	41248824	41251172	+	41248824	41261100	A3SS	0.33	50	50	ENSMUST00000163475.3	ENSMUSG00000091474.3	2610021A01Rik	chr7	protein_coding	RIKEN cDNA 2610021A01 gene
chr7	41261917	41262580	+	41261921	41262580	A5SS	0.5	50	50	ENSMUST00000163475.3	ENSMUSG00000091474.3	2610021A01Rik	chr7	protein_coding	RIKEN cDNA 2610021A01 gene
chr7	41283118	41296915	+	41283118;41284134	41284104;41296915	ES	0.33	50	50	ENSMUST00000154942.2	ENSMUSG00000074165.11	Zfp788	chr7	protein_coding	zinc finger protein 788
chr7	41284134;41292856	41292757;41296915	+	41284134	41296915	cassetteExon	0.5	100	100	ENSMUST00000154942.2	ENSMUSG00000074165.11	Zfp788	chr7	protein_coding	zinc finger protein 788
chr7	41284134	41296907	+	41284134	41296915	A3SS	0.33	50	50	ENSMUST00000154942.2	ENSMUSG00000074165.11	Zfp788	chr7	protein_coding	zinc finger protein 788
chr7	41284134	41296907	+	41284134;41292856	41292757;41296907	ES	0.5	50	50	ENSMUST00000100275.10	ENSMUSG00000074165.11	Zfp788	chr7	protein_coding	zinc finger protein 788
chr7	41283118	41296915	+	41283118	41284104	A3SS&ES	0.5	50	50	ENSMUST00000100275.10	ENSMUSG00000074165.11	Zfp788	chr7	protein_coding	zinc finger protein 788
chr7	41284134	41296915	+	41284134	41292757	A3SS&ES	0.33	50	50	ENSMUST00000100275.10	ENSMUSG00000074165.11	Zfp788	chr7	protein_coding	zinc finger protein 788
chr7	41292856	41296915	+	41292856	41296907	A3SS	0.5	50	50	ENSMUST00000100275.10	ENSMUSG00000074165.11	Zfp788	chr7	protein_coding	zinc finger protein 788
chr7	41284323	41292757	+	41284134	41292757	A5SS	0.5	50	50	ENSMUST00000100275.10	ENSMUSG00000074165.11	Zfp788	chr7	protein_coding	zinc finger protein 788
chr7	41284134	41296915	+	41292856	41296915	A5SS&ES	0.33	50	50	ENSMUST00000131180.8	ENSMUSG00000074165.11	Zfp788	chr7	protein_coding	zinc finger protein 788
chr7	41292856	41296915	+	41283118	41296915	A5SS	0.33	50	50	ENSMUST00000045720.14	ENSMUSG00000074165.11	Zfp788	chr7	protein_coding	zinc finger protein 788
chr7	41284134	41296907	+	41284134	41292757	A3SS&ES	0.33	50	50	ENSMUST00000098508.9	ENSMUSG00000074165.11	Zfp788	chr7	protein_coding	zinc finger protein 788
chr7	41317512	41335716	+	41317512	41335718	A3SS	0.5	50	50	ENSMUST00000150856.2	ENSMUSG00000074164.13	Vmn2r-ps54	chr7	transcribed_unprocessed_pseudogene	vomeronasal 2, receptor, pseudogene 54
chr7	41335882	41336184	+	41335849	41336184	A5SS	0.5	50	50	ENSMUST00000150856.2	ENSMUSG00000074164.13	Vmn2r-ps54	chr7	transcribed_unprocessed_pseudogene	vomeronasal 2, receptor, pseudogene 54
chr7	41343476	41351400	+	41343476	41344216	3pMXE	0.33	50	50	ENSMUST00000153508.8	ENSMUSG00000074164.13	Vmn2r-ps54	chr7	transcribed_unprocessed_pseudogene	vomeronasal 2, receptor, pseudogene 54
chr7	41343476	41368427	+	41343476	41344216	3pMXE	0.33	50	50	ENSMUST00000153508.8	ENSMUSG00000074164.13	Vmn2r-ps54	chr7	transcribed_unprocessed_pseudogene	vomeronasal 2, receptor, pseudogene 54
chr7	41343476	41351400	+	41343476	41368427	A3SS	0.33	50	50	ENSMUST00000150147.8	ENSMUSG00000074164.13	Vmn2r-ps54	chr7	transcribed_unprocessed_pseudogene	vomeronasal 2, receptor, pseudogene 54
chr7	41487233	41511266	-	41487233;41510039	41509916;41511266	ES	0.5	50	50	ENSMUST00000171671.3	ENSMUSG00000090383.3	Vmn2r58	chr7	protein_coding	vomeronasal 2, receptor 58
chr7	41514758;41520292	41520034;41521886	-	41514758	41521886	cassetteExon	0.5	100	100	ENSMUST00000171671.3	ENSMUSG00000090383.3	Vmn2r58	chr7	protein_coding	vomeronasal 2, receptor 58
chr7	41514758;41521571	41521444;41521886	-	41514758	41521886	cassetteExon	0.5	100	100	ENSMUST00000171671.3	ENSMUSG00000090383.3	Vmn2r58	chr7	protein_coding	vomeronasal 2, receptor 58
chr7	41487233	41510966	-	41487233	41509916	A5SS&ES	0.33	50	50	ENSMUST00000171671.3	ENSMUSG00000090383.3	Vmn2r58	chr7	protein_coding	vomeronasal 2, receptor 58
chr7	41514758;41520292	41520034;41521444	-	41514758	41521444	cassetteExon	0.5	100	100	ENSMUST00000233957.2	ENSMUSG00000090383.3	Vmn2r58	chr7	protein_coding	vomeronasal 2, receptor 58
chr7	41514758;41520292	41520034;41521886	-	41514758;41521571	41521444;41521886	MXE	0.5	100	100	ENSMUST00000233957.2	ENSMUSG00000090383.3	Vmn2r58	chr7	protein_coding	vomeronasal 2, receptor 58
chr7	41520292;41521571	41521444;41521886	-	41520292	41521886	cassetteExon	0.5	100	100	ENSMUST00000233389.2	ENSMUSG00000090383.3	Vmn2r58	chr7	protein_coding	vomeronasal 2, receptor 58
chr7	41487233	41510966	-	41487233	41511266	A5SS	0.33	50	50	ENSMUST00000233081.2	ENSMUSG00000090383.3	Vmn2r58	chr7	protein_coding	vomeronasal 2, receptor 58
chr7	41487233	41511266	-	41510039	41511266	3pMXE	0.5	50	50	ENSMUST00000232976.2	ENSMUSG00000090383.3	Vmn2r58	chr7	protein_coding	vomeronasal 2, receptor 58
chr7	41684799	41691836	-	41662153	41691836	A3SS	0.5	50	50	ENSMUST00000168489.3	ENSMUSG00000092032.3	Vmn2r59	chr7	protein_coding	vomeronasal 2, receptor 59
chr7	41697038	41708197	-	41696531	41708197	A3SS	0.5	50	50	ENSMUST00000168489.3	ENSMUSG00000092032.3	Vmn2r59	chr7	protein_coding	vomeronasal 2, receptor 59
chr7	41766103	41784999	+	41757479	41784999	A5SS	0.5	50	50	ENSMUST00000166447.3	ENSMUSG00000090619.3	Vmn2r60	chr7	protein_coding	vomeronasal 2, receptor 60
chr7	42139700	42155034	-	42139700;42150849	42150782;42155034	ES	0.33	50	50	ENSMUST00000174407.3	ENSMUSG00000092416.3	Zfp141	chr7	protein_coding	zinc finger protein 141
chr7	42152365	42155034	-	42150849	42155034	A3SS	0.33	50	50	ENSMUST00000174407.3	ENSMUSG00000092416.3	Zfp141	chr7	protein_coding	zinc finger protein 141
chr7	42137974	42138863	-	42137974	42138859	A5SS	0.5	50	50	ENSMUST00000174407.3	ENSMUSG00000092416.3	Zfp141	chr7	protein_coding	zinc finger protein 141
chr7	42150849	42151292	-	42150849	42155034	A5SS	0.5	50	50	ENSMUST00000174407.3	ENSMUSG00000092416.3	Zfp141	chr7	protein_coding	zinc finger protein 141
chr7	42152365	42155034	-	42139700	42155034	A3SS	0.33	50	50	ENSMUST00000173489.3	ENSMUSG00000092416.3	Zfp141	chr7	protein_coding	zinc finger protein 141
chr7	42265457;42265783	42265657;42291904	-	42265457	42291904	cassetteExon	0.5	100	100	ENSMUST00000107994.3	ENSMUSG00000074158.10	Zfp976	chr7	protein_coding	zinc finger protein 976
chr7	42265457	42291904	-	42265457	42265657	5pMXE	0.5	50	50	ENSMUST00000187616.3	ENSMUSG00000074158.10	Zfp976	chr7	protein_coding	zinc finger protein 976
chr7	42340500	42342075	-	42314568	42342075	A3SS	0.5	50	50	ENSMUST00000107992.2	ENSMUSG00000069727.6	Zfp975	chr7	protein_coding	zinc finger protein 975
chr7	42574713	42577229	-	42574713;42576503	42576276;42577229	ES	0.25	50	50	ENSMUST00000163803.3	ENSMUSG00000090751.3	Vmn2r63	chr7	protein_coding	vomeronasal 2, receptor 63
chr7	42576332	42577229	-	42576503	42577229	A3SS	0.25	50	50	ENSMUST00000163803.3	ENSMUSG00000090751.3	Vmn2r63	chr7	protein_coding	vomeronasal 2, receptor 63
chr7	42574713	42577229	-	42574713;42576332	42576276;42577229	ES	0.25	50	50	ENSMUST00000233726.2	ENSMUSG00000090751.3	Vmn2r63	chr7	protein_coding	vomeronasal 2, receptor 63
chr7	42553594	42577229	-	42553594;42574713	42574590;42577229	ES	0.25	50	50	ENSMUST00000233303.2	ENSMUSG00000090751.3	Vmn2r63	chr7	protein_coding	vomeronasal 2, receptor 63
chr7	42576332	42577229	-	42553594	42577229	A3SS	0.25	50	50	ENSMUST00000232761.2	ENSMUSG00000090751.3	Vmn2r63	chr7	protein_coding	vomeronasal 2, receptor 63
chr7	42576503	42577229	-	42553594	42577229	A3SS	0.25	50	50	ENSMUST00000232761.2	ENSMUSG00000090751.3	Vmn2r63	chr7	protein_coding	vomeronasal 2, receptor 63
chr7	42836977;42838574	42838467;42838726	+	42836977	42838726	cassetteExon	0.5	100	100	ENSMUST00000205912.2	ENSMUSG00000064194.11	Zfp936	chr7	protein_coding	zinc finger protein 936
chr7	42827127	42836594	+	42763706	42836594	A5SS	0.5	50	50	ENSMUST00000205912.2	ENSMUSG00000064194.11	Zfp936	chr7	protein_coding	zinc finger protein 936
chr7	42863571	42872999	+	42863571;42870329	42870266;42872999	ES	0.5	50	50	ENSMUST00000205748.2	ENSMUSG00000074887.5	EU599041	chr7	lncRNA	expressed sequence EU599041
chr7	42863571	42868592	+	42863571	42870266	A3SS	0.33	50	50	ENSMUST00000205748.2	ENSMUSG00000074887.5	EU599041	chr7	lncRNA	expressed sequence EU599041
chr7	42863571	42868592	+	42863571	42872999	A3SS	0.33	50	50	ENSMUST00000206405.2	ENSMUSG00000074887.5	EU599041	chr7	lncRNA	expressed sequence EU599041
chr7	42951161;42957996	42957891;42960455	-	42951161	42960455	cassetteExon	0.5	100	100	ENSMUST00000012796.14	ENSMUSG00000012640.17	Zfp715	chr7	protein_coding	zinc finger protein 715
chr7	42949600	42950594	-	42947563	42950594	A3SS	0.5	50	50	ENSMUST00000012796.14	ENSMUSG00000012640.17	Zfp715	chr7	protein_coding	zinc finger protein 715
chr7	42960674	42962528	-	42960609	42962528	A3SS	0.5	50	50	ENSMUST00000012796.14	ENSMUSG00000012640.17	Zfp715	chr7	protein_coding	zinc finger protein 715
chr7	42960609	42962418	-	42960609	42962528	A5SS	0.5	50	50	ENSMUST00000012796.14	ENSMUSG00000012640.17	Zfp715	chr7	protein_coding	zinc finger protein 715
chr7	42960674	42962418	-	42960674	42962528	A5SS	0.5	50	50	ENSMUST00000145622.8	ENSMUSG00000012640.17	Zfp715	chr7	protein_coding	zinc finger protein 715
chr7	42960674	42962418	-	42960609	42962418	A3SS	0.5	50	50	ENSMUST00000139061.2	ENSMUSG00000012640.17	Zfp715	chr7	protein_coding	zinc finger protein 715
chr7	43005053	43005727	+	43005053	43005324	A3SS&ES	0.5	50	50	ENSMUST00000145867.3	ENSMUSG00000039013.17	Siglecf	chr7	protein_coding	sialic acid binding Ig-like lectin F
chr7	43005860	43005989	+	43005860	43008007	A3SS	0.5	50	50	ENSMUST00000145867.3	ENSMUSG00000039013.17	Siglecf	chr7	protein_coding	sialic acid binding Ig-like lectin F
chr7	43000976	43001071	+	43001008	43001071	A5SS	0.5	50	50	ENSMUST00000012798.14	ENSMUSG00000039013.17	Siglecf	chr7	protein_coding	sialic acid binding Ig-like lectin F
chr7	43079580	43080009	+	43079904	43080009	A5SS	0.5	50	50	ENSMUST00000177375.2	ENSMUSG00000093639.5	Gm52993	chr7	protein_coding	predicted gene, 52993
chr7	43087107	43087463	+	43087107;43087333	43087199;43087463	ES	0.5	50	50	ENSMUST00000070518.4	ENSMUSG00000004612.10	Nkg7	chr7	protein_coding	natural killer cell group 7 sequence
chr7	43101923	43103942	+	43101923;43102381	43102223;43103942	ES	0.5	50	50	ENSMUST00000004729.5	ENSMUSG00000004610.5	Etfb	chr7	protein_coding	electron transferring flavoprotein, beta polypeptide
chr7	43104004	43106994	+	43104004;43106061	43105903;43106994	ES	0.5	50	50	ENSMUST00000004729.5	ENSMUSG00000004610.5	Etfb	chr7	protein_coding	electron transferring flavoprotein, beta polypeptide
chr7	43106061	43112561	+	43106061	43106994	3pMXE	0.25	50	50	ENSMUST00000004729.5	ENSMUSG00000004610.5	Etfb	chr7	protein_coding	electron transferring flavoprotein, beta polypeptide
chr7	43106061	43106933	+	43106061	43106994	A3SS	0.25	50	50	ENSMUST00000004729.5	ENSMUSG00000004610.5	Etfb	chr7	protein_coding	electron transferring flavoprotein, beta polypeptide
chr7	43106061	43107100	+	43106061	43106994	A3SS	0.25	50	50	ENSMUST00000004729.5	ENSMUSG00000004610.5	Etfb	chr7	protein_coding	electron transferring flavoprotein, beta polypeptide
chr7	43104004	43106994	+	43104004	43105903	3pMXE	0.33	50	50	ENSMUST00000206196.2	ENSMUSG00000004610.5	Etfb	chr7	protein_coding	electron transferring flavoprotein, beta polypeptide
chr7	43104004	43112561	+	43104004	43105903	3pMXE	0.33	50	50	ENSMUST00000206196.2	ENSMUSG00000004610.5	Etfb	chr7	protein_coding	electron transferring flavoprotein, beta polypeptide
chr7	43106061	43112561	+	43106061	43107100	3pMXE	0.25	50	50	ENSMUST00000206411.2	ENSMUSG00000004610.5	Etfb	chr7	protein_coding	electron transferring flavoprotein, beta polypeptide
chr7	43106061	43106933	+	43106061	43107100	A3SS	0.25	50	50	ENSMUST00000206411.2	ENSMUSG00000004610.5	Etfb	chr7	protein_coding	electron transferring flavoprotein, beta polypeptide
chr7	43101923	43103942	+	43102381	43103942	5pMXE	0.5	50	50	ENSMUST00000205363.2	ENSMUSG00000004610.5	Etfb	chr7	protein_coding	electron transferring flavoprotein, beta polypeptide
chr7	43104004	43112561	+	43104004	43106994	3pMXE	0.33	50	50	ENSMUST00000205363.2	ENSMUSG00000004610.5	Etfb	chr7	protein_coding	electron transferring flavoprotein, beta polypeptide
chr7	43106061	43112561	+	43106061	43106933	3pMXE	0.25	50	50	ENSMUST00000143096.2	ENSMUSG00000004610.5	Etfb	chr7	protein_coding	electron transferring flavoprotein, beta polypeptide
chr7	43104004	43112561	+	43104004;43106061	43105903;43112561	ES	0.5	50	50	ENSMUST00000203633.3	ENSMUSG00000107482.3	Etfbl	chr7	protein_coding	electron transferring flavoprotein, beta polypeptide like
chr7	43112696	43113090	+	43112696	43112784	3pMXE	0.5	50	50	ENSMUST00000203633.3	ENSMUSG00000107482.3	Etfbl	chr7	protein_coding	electron transferring flavoprotein, beta polypeptide like
chr7	43117129	43117479	+	43117129	43117378	A3SS	0.5	50	50	ENSMUST00000107977.4	ENSMUSG00000070604.6	Vsig10l	chr7	protein_coding	V-set and immunoglobulin domain containing 10 like
chr7	43115247	43115790	+	43114929	43115790	A5SS	0.5	50	50	ENSMUST00000107977.4	ENSMUSG00000070604.6	Vsig10l	chr7	protein_coding	V-set and immunoglobulin domain containing 10 like
chr7	43126083	43127538	-	43126083;43126390	43126256;43127538	ES	0.5	50	50	ENSMUST00000107974.3	ENSMUSG00000013367.6	Iglon5	chr7	protein_coding	IgLON family member 5
chr7	43147756	43150440	-	43147756;43148878	43148597;43150440	ES	0.33	50	50	ENSMUST00000013497.8	ENSMUSG00000013353.11	4931406B18Rik	chr7	protein_coding	RIKEN cDNA 4931406B18 gene
chr7	43148878	43153607	-	43148878;43150730	43150440;43153607	ES	0.5	50	50	ENSMUST00000013497.8	ENSMUSG00000013353.11	4931406B18Rik	chr7	protein_coding	RIKEN cDNA 4931406B18 gene
chr7	43148878;43149446	43149371;43150440	-	43148878	43150440	cassetteExon	0.5	100	100	ENSMUST00000013497.8	ENSMUSG00000013353.11	4931406B18Rik	chr7	protein_coding	RIKEN cDNA 4931406B18 gene
chr7	43146097	43147233	-	43145158	43147233	A3SS	0.5	50	50	ENSMUST00000013497.8	ENSMUSG00000013353.11	4931406B18Rik	chr7	protein_coding	RIKEN cDNA 4931406B18 gene
chr7	43153708	43154811	-	43153708	43154715	A5SS	0.5	50	50	ENSMUST00000013497.8	ENSMUSG00000013353.11	4931406B18Rik	chr7	protein_coding	RIKEN cDNA 4931406B18 gene
chr7	43147756;43148878	43148597;43153607	-	43147756;43150730	43150440;43153607	MXE	0.5	100	100	ENSMUST00000163474.2	ENSMUSG00000013353.11	4931406B18Rik	chr7	protein_coding	RIKEN cDNA 4931406B18 gene
chr7	43149446	43150440	-	43147756	43150440	A3SS	0.33	50	50	ENSMUST00000163474.2	ENSMUSG00000013353.11	4931406B18Rik	chr7	protein_coding	RIKEN cDNA 4931406B18 gene
chr7	43148878	43149371	-	43148878	43153607	A5SS	0.33	50	50	ENSMUST00000163619.8	ENSMUSG00000013353.11	4931406B18Rik	chr7	protein_coding	RIKEN cDNA 4931406B18 gene
chr7	43148878	43153607	-	43150730	43153607	3pMXE	0.5	50	50	ENSMUST00000168883.2	ENSMUSG00000013353.11	4931406B18Rik	chr7	protein_coding	RIKEN cDNA 4931406B18 gene
chr7	43160730	43164996	-	43160730;43164264	43164114;43164996	ES	0.5	50	50	ENSMUST00000206158.2	ENSMUSG00000108695.2	Siglecl1	chr7	lncRNA	Siglec family like 1
chr7	43165101	43165547	-	43165101	43165735	A5SS	0.5	50	50	ENSMUST00000205521.2	ENSMUSG00000108695.2	Siglecl1	chr7	lncRNA	Siglec family like 1
chr7	43166291	43167889	-	43166291	43168365	A5SS	0.5	50	50	ENSMUST00000205521.2	ENSMUSG00000108695.2	Siglecl1	chr7	lncRNA	Siglec family like 1
chr7	43178432	43179636	-	43178432;43179356	43179290;43179636	ES	0.5	50	50	ENSMUST00000205503.2	ENSMUSG00000004609.12	Cd33	chr7	protein_coding	CD33 antigen
chr7	43178432;43178979	43178897;43179290	-	43178432	43179290	cassetteExon	0.5	100	100	ENSMUST00000205503.2	ENSMUSG00000004609.12	Cd33	chr7	protein_coding	CD33 antigen
chr7	43181740	43182255	-	43181740	43182026	A5SS	0.5	50	50	ENSMUST00000205503.2	ENSMUSG00000004609.12	Cd33	chr7	protein_coding	CD33 antigen
chr7	43178432;43179356	43178897;43179636	-	43178432	43179636	cassetteExon	0.5	100	100	ENSMUST00000206371.2	ENSMUSG00000004609.12	Cd33	chr7	protein_coding	CD33 antigen
chr7	43229190	43235778	+	43229190;43233720	43233492;43235778	ES	0.5	50	50	ENSMUST00000058104.8	ENSMUSG00000030469.11	Zfp719	chr7	protein_coding	zinc finger protein 719
chr7	43229190	43235778	+	43229190	43233492	3pMXE	0.5	50	50	ENSMUST00000147075.2	ENSMUSG00000030469.11	Zfp719	chr7	protein_coding	zinc finger protein 719
chr7	43256698;43259402	43259210;43261407	+	43256698	43261407	cassetteExon	0.5	100	100	ENSMUST00000120935.2	ENSMUSG00000055102.16	Zfp819	chr7	protein_coding	zinc finger protein 819
chr7	43256698	43259210	+	43256741	43259210	A5SS	0.5	50	50	ENSMUST00000127765.8	ENSMUSG00000055102.16	Zfp819	chr7	protein_coding	zinc finger protein 819
chr7	43256698	43261407	+	43259402	43261407	A5SS&ES	0.5	50	50	ENSMUST00000127765.8	ENSMUSG00000055102.16	Zfp819	chr7	protein_coding	zinc finger protein 819
chr7	43301113	43305950	-	43301113;43305597	43305516;43305950	ES	0.5	50	50	ENSMUST00000032667.10	ENSMUSG00000030474.10	Siglece	chr7	protein_coding	sialic acid binding Ig-like lectin E
chr7	43397214	43398075	-	43353277	43398075	A3SS	0.5	50	50	ENSMUST00000181454.7	ENSMUSG00000097178.8	2310002F09Rik	chr7	lncRNA	RIKEN cDNA 2310002F09 gene
chr7	43446332	43446844	-	43408008	43446844	A3SS	0.5	50	50	ENSMUST00000181454.7	ENSMUSG00000097178.8	2310002F09Rik	chr7	lncRNA	RIKEN cDNA 2310002F09 gene
chr7	43364477	43370391	+	43363306	43370391	A5SS	0.5	50	50	ENSMUST00000066834.8	ENSMUSG00000054046.8	Klk13	chr7	protein_coding	kallikrein related-peptidase 13
chr7	43425978	43426912	+	43425978;43426461	43426305;43426912	ES	0.33	50	50	ENSMUST00000080211.12	ENSMUSG00000067616.12	Klk11	chr7	protein_coding	kallikrein related-peptidase 11
chr7	43426465	43426912	+	43426461	43426912	A5SS	0.33	50	50	ENSMUST00000080211.12	ENSMUSG00000067616.12	Klk11	chr7	protein_coding	kallikrein related-peptidase 11
chr7	43425978;43426465	43426305;43426912	+	43425978	43426912	cassetteExon	0.5	100	100	ENSMUST00000205566.2	ENSMUSG00000067616.12	Klk11	chr7	protein_coding	kallikrein related-peptidase 11
chr7	43474015	43475033	+	43474015	43474934	A3SS	0.5	50	50	ENSMUST00000107968.10	ENSMUSG00000050063.19	Klk6	chr7	protein_coding	kallikrein related-peptidase 6
chr7	43474019	43474934	+	43474015	43474934	A5SS	0.5	50	50	ENSMUST00000107968.10	ENSMUSG00000050063.19	Klk6	chr7	protein_coding	kallikrein related-peptidase 6
chr7	43569065	43570023	+	43568088	43570023	A5SS	0.5	50	50	ENSMUST00000205342.2	ENSMUSG00000108444.2	Klk2-ps	chr7	transcribed_unprocessed_pseudogene	kallikrein-related peptidase 2, pseudogene
chr7	43871445	43871898	-	43871148	43871898	A3SS	0.5	50	50	ENSMUST00000072123.6	ENSMUSG00000062073.7	Gm10109	chr7	transcribed_unprocessed_pseudogene	predicted gene 10109
chr7	43872044	43872934	-	43872044	43875771	A5SS	0.5	50	50	ENSMUST00000072123.6	ENSMUSG00000062073.7	Gm10109	chr7	transcribed_unprocessed_pseudogene	predicted gene 10109
chr7	43874907	43876945	+	43874948	43876945	A5SS	0.5	50	50	ENSMUST00000075162.5	ENSMUSG00000063903.6	Klk1	chr7	protein_coding	kallikrein 1
chr7	43881980	43896007	-	43881980	43885493	5pMXE	0.5	50	50	ENSMUST00000236952.2	ENSMUSG00000038782.8	1700028J19Rik	chr7	protein_coding	RIKEN cDNA 1700028J19 gene
chr7	43880339	43880750	-	43880334	43880750	A3SS	0.5	50	50	ENSMUST00000236952.2	ENSMUSG00000038782.8	1700028J19Rik	chr7	protein_coding	RIKEN cDNA 1700028J19 gene
chr7	43880065	43880267	-	43880065	43880206	A5SS	0.5	50	50	ENSMUST00000236952.2	ENSMUSG00000038782.8	1700028J19Rik	chr7	protein_coding	RIKEN cDNA 1700028J19 gene
chr7	43888316	43892363	+	43888316;43892099	43891968;43892363	ES	0.5	50	50	ENSMUST00000223070.2	ENSMUSG00000108622.3	Gm36864	chr7	protein_coding	predicted gene, 36864
chr7	43885884	43888170	+	43887105	43888170	A5SS&ES	0.5	50	50	ENSMUST00000223070.2	ENSMUSG00000108622.3	Gm36864	chr7	protein_coding	predicted gene, 36864
chr7	43886024	43886837	+	43886497	43886837	A5SS	0.5	50	50	ENSMUST00000223070.2	ENSMUSG00000108622.3	Gm36864	chr7	protein_coding	predicted gene, 36864
chr7	43897719	43899445	+	43897719;43899023	43898966;43899445	ES	0.5	50	50	ENSMUST00000055858.14	ENSMUSG00000045411.17	2410002F23Rik	chr7	protein_coding	RIKEN cDNA 2410002F23 gene
chr7	43899764	43909591	+	43899764	43900037	3pMXE	0.33	50	50	ENSMUST00000055858.14	ENSMUSG00000045411.17	2410002F23Rik	chr7	protein_coding	RIKEN cDNA 2410002F23 gene
chr7	43896247;43896840	43896662;43897676	+	43896247	43897676	cassetteExon	0.5	100	100	ENSMUST00000055858.14	ENSMUSG00000045411.17	2410002F23Rik	chr7	protein_coding	RIKEN cDNA 2410002F23 gene
chr7	43896247;43896840	43896675;43897676	+	43896247	43897676	cassetteExon	0.5	100	100	ENSMUST00000055858.14	ENSMUSG00000045411.17	2410002F23Rik	chr7	protein_coding	RIKEN cDNA 2410002F23 gene
chr7	43899764	43900435	+	43899764	43900037	A3SS	0.33	50	50	ENSMUST00000055858.14	ENSMUSG00000045411.17	2410002F23Rik	chr7	protein_coding	RIKEN cDNA 2410002F23 gene
chr7	43896232	43897676	+	43896247	43897676	A5SS	0.25	50	50	ENSMUST00000055858.14	ENSMUSG00000045411.17	2410002F23Rik	chr7	protein_coding	RIKEN cDNA 2410002F23 gene
chr7	43897483	43897676	+	43896247	43897676	A5SS	0.25	50	50	ENSMUST00000055858.14	ENSMUSG00000045411.17	2410002F23Rik	chr7	protein_coding	RIKEN cDNA 2410002F23 gene
chr7	43896232;43896840	43896662;43897676	+	43896232	43897676	cassetteExon	0.5	100	100	ENSMUST00000137702.8	ENSMUSG00000045411.17	2410002F23Rik	chr7	protein_coding	RIKEN cDNA 2410002F23 gene
chr7	43896232;43896840	43896675;43897676	+	43896232	43897676	cassetteExon	0.5	100	100	ENSMUST00000137702.8	ENSMUSG00000045411.17	2410002F23Rik	chr7	protein_coding	RIKEN cDNA 2410002F23 gene
chr7	43896232;43897483	43897334;43897676	+	43896232	43897676	cassetteExon	0.5	100	100	ENSMUST00000137702.8	ENSMUSG00000045411.17	2410002F23Rik	chr7	protein_coding	RIKEN cDNA 2410002F23 gene
chr7	43896232;43897483	43897334;43897676	+	43896232;43896840	43896662;43897676	MXE	0.5	100	100	ENSMUST00000188111.7	ENSMUSG00000045411.17	2410002F23Rik	chr7	protein_coding	RIKEN cDNA 2410002F23 gene
chr7	43896840;43897483	43897334;43897676	+	43896840	43897676	cassetteExon	0.5	100	100	ENSMUST00000188111.7	ENSMUSG00000045411.17	2410002F23Rik	chr7	protein_coding	RIKEN cDNA 2410002F23 gene
chr7	43896232	43896675	+	43896232	43896662	A3SS	0.25	50	50	ENSMUST00000188111.7	ENSMUSG00000045411.17	2410002F23Rik	chr7	protein_coding	RIKEN cDNA 2410002F23 gene
chr7	43896247	43896662	+	43896232	43896662	A5SS	0.5	50	50	ENSMUST00000188111.7	ENSMUSG00000045411.17	2410002F23Rik	chr7	protein_coding	RIKEN cDNA 2410002F23 gene
chr7	43896247	43897676	+	43896840	43897676	A5SS&ES	0.25	50	50	ENSMUST00000188111.7	ENSMUSG00000045411.17	2410002F23Rik	chr7	protein_coding	RIKEN cDNA 2410002F23 gene
chr7	43896232;43897483	43897334;43897676	+	43896232;43896840	43896675;43897676	MXE	0.5	100	100	ENSMUST00000185481.7	ENSMUSG00000045411.17	2410002F23Rik	chr7	protein_coding	RIKEN cDNA 2410002F23 gene
chr7	43896247	43896675	+	43896232	43896675	A5SS	0.5	50	50	ENSMUST00000185481.7	ENSMUSG00000045411.17	2410002F23Rik	chr7	protein_coding	RIKEN cDNA 2410002F23 gene
chr7	43896247	43896662	+	43896247	43896675	A3SS	0.33	50	50	ENSMUST00000146155.8	ENSMUSG00000045411.17	2410002F23Rik	chr7	protein_coding	RIKEN cDNA 2410002F23 gene
chr7	43896232	43897334	+	43896840	43897334	A5SS&ES	0.5	50	50	ENSMUST00000146155.8	ENSMUSG00000045411.17	2410002F23Rik	chr7	protein_coding	RIKEN cDNA 2410002F23 gene
chr7	43896232	43897676	+	43897483	43897676	A5SS&ES	0.25	50	50	ENSMUST00000146155.8	ENSMUSG00000045411.17	2410002F23Rik	chr7	protein_coding	RIKEN cDNA 2410002F23 gene
chr7	43896232	43897676	+	43896840	43897676	A5SS&ES	0.25	50	50	ENSMUST00000084937.11	ENSMUSG00000045411.17	2410002F23Rik	chr7	protein_coding	RIKEN cDNA 2410002F23 gene
chr7	43896247	43897676	+	43896247	43896675	A3SS	0.33	50	50	ENSMUST00000107948.8	ENSMUSG00000045411.17	2410002F23Rik	chr7	protein_coding	RIKEN cDNA 2410002F23 gene
chr7	43896247	43897676	+	43896247	43896662	3pMXE	0.33	50	50	ENSMUST00000136210.3	ENSMUSG00000045411.17	2410002F23Rik	chr7	protein_coding	RIKEN cDNA 2410002F23 gene
chr7	43896232;43896840	43896662;43897334	+	43896232	43897334	cassetteExon	0.5	100	100	ENSMUST00000187524.7	ENSMUSG00000045411.17	2410002F23Rik	chr7	protein_coding	RIKEN cDNA 2410002F23 gene
chr7	43896232;43896840	43896675;43897334	+	43896232	43897334	cassetteExon	0.5	100	100	ENSMUST00000187524.7	ENSMUSG00000045411.17	2410002F23Rik	chr7	protein_coding	RIKEN cDNA 2410002F23 gene
chr7	43897719	43899445	+	43899023	43899445	A5SS	0.5	50	50	ENSMUST00000071296.11	ENSMUSG00000045411.17	2410002F23Rik	chr7	protein_coding	RIKEN cDNA 2410002F23 gene
chr7	43899764	43909591	+	43899764	43900435	3pMXE	0.33	50	50	ENSMUST00000191537.7	ENSMUSG00000045411.17	2410002F23Rik	chr7	protein_coding	RIKEN cDNA 2410002F23 gene
chr7	43903758	43904595	-	43903758;43904515	43904420;43904595	ES	0.5	50	50	ENSMUST00000107945.8	ENSMUSG00000012777.15	Acp4	chr7	protein_coding	acid phosphatase 4
chr7	43902623	43902702	-	43901866	43902702	A3SS	0.5	50	50	ENSMUST00000107945.8	ENSMUSG00000012777.15	Acp4	chr7	protein_coding	acid phosphatase 4
chr7	43983042	43991522	+	43983042;43983483	43983457;43991522	ES	0.33	50	50	ENSMUST00000107938.8	ENSMUSG00000038738.16	Shank1	chr7	protein_coding	SH3 and multiple ankyrin repeat domains 1
chr7	43993162	43993930	+	43993162;43993745	43993722;43993930	ES	0.5	50	50	ENSMUST00000107938.8	ENSMUSG00000038738.16	Shank1	chr7	protein_coding	SH3 and multiple ankyrin repeat domains 1
chr7	43991604	43991849	+	43991604	43991844	A3SS	0.5	50	50	ENSMUST00000107938.8	ENSMUSG00000038738.16	Shank1	chr7	protein_coding	SH3 and multiple ankyrin repeat domains 1
chr7	43985627	43991522	+	43983483	43991522	A5SS	0.33	50	50	ENSMUST00000107938.8	ENSMUSG00000038738.16	Shank1	chr7	protein_coding	SH3 and multiple ankyrin repeat domains 1
chr7	43985627	43991522	+	43983042	43991522	A5SS	0.33	50	50	ENSMUST00000107934.2	ENSMUSG00000038738.16	Shank1	chr7	protein_coding	SH3 and multiple ankyrin repeat domains 1
chr7	44012439	44022678	-	44012439	44023747	A5SS	0.5	50	50	ENSMUST00000107933.8	ENSMUSG00000008028.16	1700008O03Rik	chr7	protein_coding	RIKEN cDNA 1700008O03 gene
chr7	44012439	44035034	-	44012439	44023747	5pMXE	0.33	50	50	ENSMUST00000137946.2	ENSMUSG00000008028.16	1700008O03Rik	chr7	protein_coding	RIKEN cDNA 1700008O03 gene
chr7	44012439	44035034	-	44012439	44022678	5pMXE	0.33	50	50	ENSMUST00000150886.2	ENSMUSG00000008028.16	1700008O03Rik	chr7	protein_coding	RIKEN cDNA 1700008O03 gene
chr7	44030344	44035034	-	44012439	44035034	A3SS	0.5	50	50	ENSMUST00000150034.2	ENSMUSG00000008028.16	1700008O03Rik	chr7	protein_coding	RIKEN cDNA 1700008O03 gene
chr7	44034373	44034637	+	44034373	44035380	A3SS	0.25	50	50	ENSMUST00000118962.8	ENSMUSG00000030731.14	Syt3	chr7	protein_coding	synaptotagmin III
chr7	44034373	44035353	+	44034373	44035380	A3SS	0.25	50	50	ENSMUST00000118962.8	ENSMUSG00000030731.14	Syt3	chr7	protein_coding	synaptotagmin III
chr7	44034373	44035375	+	44034373	44035380	A3SS	0.25	50	50	ENSMUST00000118962.8	ENSMUSG00000030731.14	Syt3	chr7	protein_coding	synaptotagmin III
chr7	44034373	44035353	+	44034373	44034637	3pMXE	0.25	50	50	ENSMUST00000132399.8	ENSMUSG00000030731.14	Syt3	chr7	protein_coding	synaptotagmin III
chr7	44034373	44035375	+	44034373	44034637	3pMXE	0.25	50	50	ENSMUST00000132399.8	ENSMUSG00000030731.14	Syt3	chr7	protein_coding	synaptotagmin III
chr7	44034373	44035375	+	44034373	44035353	A3SS	0.25	50	50	ENSMUST00000118831.8	ENSMUSG00000030731.14	Syt3	chr7	protein_coding	synaptotagmin III
chr7	44091955	44094299	+	44078540	44094299	A5SS	0.33	50	50	ENSMUST00000127790.8	ENSMUSG00000047085.15	Lrrc4b	chr7	protein_coding	leucine rich repeat containing 4B
chr7	44092262	44094299	+	44078540	44094299	A5SS	0.33	50	50	ENSMUST00000127790.8	ENSMUSG00000047085.15	Lrrc4b	chr7	protein_coding	leucine rich repeat containing 4B
chr7	44092262	44094299	+	44091955	44094299	A5SS	0.33	50	50	ENSMUST00000058667.15	ENSMUSG00000047085.15	Lrrc4b	chr7	protein_coding	leucine rich repeat containing 4B
chr7	44115979	44116309	+	44115979;44116237	44116088;44116309	ES	0.5	50	50	ENSMUST00000035929.11	ENSMUSG00000038704.13	Aspdh	chr7	protein_coding	aspartate dehydrogenase domain containing
chr7	44116237	44116603	+	44116237;44116529	44116309;44116603	ES	0.5	50	50	ENSMUST00000035929.11	ENSMUSG00000038704.13	Aspdh	chr7	protein_coding	aspartate dehydrogenase domain containing
chr7	44114959	44115519	+	44114959	44115514	A3SS	0.5	50	50	ENSMUST00000035929.11	ENSMUSG00000038704.13	Aspdh	chr7	protein_coding	aspartate dehydrogenase domain containing
chr7	44114905	44115514	+	44114959	44115514	A5SS	0.33	50	50	ENSMUST00000035929.11	ENSMUSG00000038704.13	Aspdh	chr7	protein_coding	aspartate dehydrogenase domain containing
chr7	44114931	44115514	+	44114959	44115514	A5SS	0.33	50	50	ENSMUST00000035929.11	ENSMUSG00000038704.13	Aspdh	chr7	protein_coding	aspartate dehydrogenase domain containing
chr7	44114931	44115514	+	44114905	44115514	A5SS	0.33	50	50	ENSMUST00000146128.8	ENSMUSG00000038704.13	Aspdh	chr7	protein_coding	aspartate dehydrogenase domain containing
chr7	44115979	44116309	+	44115979	44116088	A3SS	0.5	50	50	ENSMUST00000133801.8	ENSMUSG00000038704.13	Aspdh	chr7	protein_coding	aspartate dehydrogenase domain containing
chr7	44115979;44116529	44116309;44116603	+	44115979;44116237	44116088;44116603	MXE	0.5	100	100	ENSMUST00000135624.2	ENSMUSG00000038704.13	Aspdh	chr7	protein_coding	aspartate dehydrogenase domain containing
chr7	44118393	44120537	+	44118393;44119961	44119836;44120537	ES	0.33	50	50	ENSMUST00000035844.11	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44119961	44120839	+	44119961;44120731	44120537;44120839	ES	0.33	50	50	ENSMUST00000035844.11	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44117614;44117841	44117730;44118234	+	44117614	44118234	cassetteExon	0.5	100	100	ENSMUST00000035844.11	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44117614;44117841	44117784;44118234	+	44117614	44118234	cassetteExon	0.5	100	100	ENSMUST00000035844.11	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44118393;44119596	44119407;44119836	+	44118393	44119836	cassetteExon	0.5	100	100	ENSMUST00000035844.11	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44119961;44120411	44120283;44120537	+	44119961	44120537	cassetteExon	0.5	100	100	ENSMUST00000035844.11	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44117614	44118231	+	44117614	44118234	A3SS	0.25	50	50	ENSMUST00000035844.11	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44118393	44119033	+	44118393	44119836	A3SS	0.2	50	50	ENSMUST00000035844.11	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44117583	44118234	+	44117614	44118234	A5SS	0.33	50	50	ENSMUST00000035844.11	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44117614;44117841	44117730;44118231	+	44117614	44118231	cassetteExon	0.5	100	100	ENSMUST00000206210.2	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44117614;44117841	44117784;44118231	+	44117614	44118231	cassetteExon	0.5	100	100	ENSMUST00000206210.2	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44117583	44118231	+	44117614	44118231	A5SS	0.33	50	50	ENSMUST00000206210.2	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44118393	44120839	+	44118393;44119961	44119836;44120839	ES	0.33	50	50	ENSMUST00000206887.2	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44118393;44120731	44120537;44120839	+	44118393;44119961	44119836;44120839	MXE	0.5	100	100	ENSMUST00000206887.2	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44119961;44120731	44120283;44120839	+	44119961	44120839	cassetteExon	0.5	100	100	ENSMUST00000206887.2	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44117583;44117841	44117730;44118231	+	44117583	44118231	cassetteExon	0.5	100	100	ENSMUST00000117324.8	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44117583;44117841	44117784;44118231	+	44117583	44118231	cassetteExon	0.5	100	100	ENSMUST00000117324.8	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44117583	44118234	+	44117583	44118231	A3SS	0.25	50	50	ENSMUST00000117324.8	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44117583;44117841	44117730;44118234	+	44117583	44118234	cassetteExon	0.5	100	100	ENSMUST00000120852.8	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44117583;44117841	44117784;44118234	+	44117583	44118234	cassetteExon	0.5	100	100	ENSMUST00000120852.8	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44118393;44120731	44120537;44120839	+	44118393	44120839	cassetteExon	0.5	100	100	ENSMUST00000134398.3	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44118393	44119033	+	44118393	44120839	A3SS	0.2	50	50	ENSMUST00000134398.3	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44118393	44119407	+	44118393	44120839	A3SS	0.2	50	50	ENSMUST00000134398.3	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44117614	44117730	+	44117614	44117784	A3SS	0.25	50	50	ENSMUST00000131817.2	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44117614	44118234	+	44117614	44117784	A3SS&ES	0.25	50	50	ENSMUST00000131817.2	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44117841	44118234	+	44117841	44118231	A3SS	0.5	50	50	ENSMUST00000131817.2	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44117583	44117784	+	44117614	44117784	A5SS	0.5	50	50	ENSMUST00000131817.2	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44117583	44118231	+	44117841	44118231	A5SS&ES	0.33	50	50	ENSMUST00000131817.2	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44117614	44118234	+	44117614	44117730	A3SS&ES	0.25	50	50	ENSMUST00000118493.8	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44117583	44117730	+	44117614	44117730	A5SS	0.5	50	50	ENSMUST00000118493.8	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44117583	44117784	+	44117583	44117730	A3SS	0.25	50	50	ENSMUST00000130220.8	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44117583	44118234	+	44117583	44117730	A3SS&ES	0.25	50	50	ENSMUST00000130220.8	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44117614	44118231	+	44117841	44118231	A5SS&ES	0.33	50	50	ENSMUST00000130220.8	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44120411	44120658	+	44120411	44120537	3pMXE	0.5	50	50	ENSMUST00000136609.8	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44118393	44119407	+	44118393	44119033	3pMXE	0.2	50	50	ENSMUST00000149341.8	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44118393	44120537	+	44118393	44119033	3pMXE	0.2	50	50	ENSMUST00000149341.8	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44118393	44120537	+	44118393	44119407	A3SS&ES	0.2	50	50	ENSMUST00000136679.8	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44119961	44120537	+	44119961	44120283	A3SS	0.33	50	50	ENSMUST00000136679.8	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44120411	44120537	+	44118393	44120537	A5SS	0.33	50	50	ENSMUST00000121922.3	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44118393	44120537	+	44118393	44119836	3pMXE	0.2	50	50	ENSMUST00000208117.2	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44118393	44120839	+	44118393	44119836	3pMXE	0.2	50	50	ENSMUST00000208117.2	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44117583	44118234	+	44117583	44117784	A3SS&ES	0.25	50	50	ENSMUST00000208117.2	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44117583	44118234	+	44117841	44118234	5pMXE	0.33	50	50	ENSMUST00000155659.2	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44117614	44118234	+	44117841	44118234	A5SS	0.33	50	50	ENSMUST00000155659.2	ENSMUSG00000038695.14	Josd2	chr7	protein_coding	Josephin domain containing 2
chr7	44140394;44140673	44140587;44141379	-	44140394	44141379	cassetteExon	0.5	100	100	ENSMUST00000118808.9	ENSMUSG00000008140.19	Emc10	chr7	protein_coding	ER membrane protein complex subunit 10
chr7	44142082	44142602	-	44142082	44142614	A5SS	0.5	50	50	ENSMUST00000118808.9	ENSMUSG00000008140.19	Emc10	chr7	protein_coding	ER membrane protein complex subunit 10
chr7	44140394	44141379	-	44140673	44141379	A3SS	0.5	50	50	ENSMUST00000147102.2	ENSMUSG00000008140.19	Emc10	chr7	protein_coding	ER membrane protein complex subunit 10
chr7	44146457	44149574	+	44146457;44147057	44146927;44149574	ES	0.5	50	50	ENSMUST00000107927.5	ENSMUSG00000051113.10	Fam71e1	chr7	protein_coding	family with sequence similarity 71, member E1
chr7	44149862	44150828	+	44149862	44150392	3pMXE	0.5	50	50	ENSMUST00000107927.5	ENSMUSG00000051113.10	Fam71e1	chr7	protein_coding	family with sequence similarity 71, member E1
chr7	44146457	44146830	+	44146457	44146927	A3SS	0.33	50	50	ENSMUST00000107927.5	ENSMUSG00000051113.10	Fam71e1	chr7	protein_coding	family with sequence similarity 71, member E1
chr7	44146488	44146927	+	44146457	44146927	A5SS	0.5	50	50	ENSMUST00000107927.5	ENSMUSG00000051113.10	Fam71e1	chr7	protein_coding	family with sequence similarity 71, member E1
chr7	44149920	44150392	+	44149862	44150392	A5SS	0.5	50	50	ENSMUST00000107927.5	ENSMUSG00000051113.10	Fam71e1	chr7	protein_coding	family with sequence similarity 71, member E1
chr7	44146457;44147057	44146830;44149574	+	44146457	44149574	cassetteExon	0.5	100	100	ENSMUST00000205819.2	ENSMUSG00000051113.10	Fam71e1	chr7	protein_coding	family with sequence similarity 71, member E1
chr7	44146457	44149574	+	44147057	44149574	A5SS&ES	0.5	50	50	ENSMUST00000206398.2	ENSMUSG00000051113.10	Fam71e1	chr7	protein_coding	family with sequence similarity 71, member E1
chr7	44157711	44158393	-	44157789	44158393	A3SS	0.5	50	50	ENSMUST00000165208.4	ENSMUSG00000038670.12	Mybpc2	chr7	protein_coding	myosin binding protein C, fast-type
chr7	44179407	44180647	-	44179353	44180647	A3SS	0.5	50	50	ENSMUST00000035323.6	ENSMUSG00000008193.14	Spib	chr7	protein_coding	Spi-B transcription factor (Spi-1/PU.1 related)
chr7	44183441	44183988	-	44183441;44183911	44183809;44183988	ES	0.5	50	50	ENSMUST00000049343.15	ENSMUSG00000038644.15	Pold1	chr7	protein_coding	polymerase (DNA directed), delta 1, catalytic subunit
chr7	44187179	44187751	-	44187179;44187529	44187416;44187751	ES	0.5	50	50	ENSMUST00000049343.15	ENSMUSG00000038644.15	Pold1	chr7	protein_coding	polymerase (DNA directed), delta 1, catalytic subunit
chr7	44191833	44192189	-	44191674	44192189	A3SS	0.5	50	50	ENSMUST00000049343.15	ENSMUSG00000038644.15	Pold1	chr7	protein_coding	polymerase (DNA directed), delta 1, catalytic subunit
chr7	44192860	44198036	-	44192860	44198179	A5SS	0.5	50	50	ENSMUST00000049343.15	ENSMUSG00000038644.15	Pold1	chr7	protein_coding	polymerase (DNA directed), delta 1, catalytic subunit
chr7	44183441	44183988	-	44183911	44183988	A3SS	0.5	50	50	ENSMUST00000136225.8	ENSMUSG00000038644.15	Pold1	chr7	protein_coding	polymerase (DNA directed), delta 1, catalytic subunit
chr7	44202044	44203003	-	44202044;44202181	44202121;44203003	ES	0.25	50	50	ENSMUST00000107912.8	ENSMUSG00000060601.14	Nr1h2	chr7	protein_coding	nuclear receptor subfamily 1, group H, member 2
chr7	44200831	44201024	-	44200921	44201024	A3SS	0.5	50	50	ENSMUST00000107912.8	ENSMUSG00000060601.14	Nr1h2	chr7	protein_coding	nuclear receptor subfamily 1, group H, member 2
chr7	44201660	44201931	-	44201669	44201931	A3SS	0.25	50	50	ENSMUST00000107912.8	ENSMUSG00000060601.14	Nr1h2	chr7	protein_coding	nuclear receptor subfamily 1, group H, member 2
chr7	44201767	44201931	-	44201669	44201931	A3SS	0.25	50	50	ENSMUST00000107912.8	ENSMUSG00000060601.14	Nr1h2	chr7	protein_coding	nuclear receptor subfamily 1, group H, member 2
chr7	44201788	44201931	-	44201669	44201931	A3SS	0.25	50	50	ENSMUST00000107912.8	ENSMUSG00000060601.14	Nr1h2	chr7	protein_coding	nuclear receptor subfamily 1, group H, member 2
chr7	44202143	44203003	-	44202181	44203003	A3SS	0.25	50	50	ENSMUST00000107912.8	ENSMUSG00000060601.14	Nr1h2	chr7	protein_coding	nuclear receptor subfamily 1, group H, member 2
chr7	44202178	44203003	-	44202181	44203003	A3SS	0.25	50	50	ENSMUST00000107912.8	ENSMUSG00000060601.14	Nr1h2	chr7	protein_coding	nuclear receptor subfamily 1, group H, member 2
chr7	44199932	44200061	-	44199932	44200169	A5SS	0.5	50	50	ENSMUST00000107912.8	ENSMUSG00000060601.14	Nr1h2	chr7	protein_coding	nuclear receptor subfamily 1, group H, member 2
chr7	44202044	44203003	-	44202044;44202178	44202121;44203003	ES	0.25	50	50	ENSMUST00000073488.12	ENSMUSG00000060601.14	Nr1h2	chr7	protein_coding	nuclear receptor subfamily 1, group H, member 2
chr7	44202143	44203003	-	44202178	44203003	A3SS	0.25	50	50	ENSMUST00000073488.12	ENSMUSG00000060601.14	Nr1h2	chr7	protein_coding	nuclear receptor subfamily 1, group H, member 2
chr7	44203132	44203229	-	44203132	44203233	A5SS	0.33	50	50	ENSMUST00000073488.12	ENSMUSG00000060601.14	Nr1h2	chr7	protein_coding	nuclear receptor subfamily 1, group H, member 2
chr7	44203132	44203247	-	44203132	44203233	A5SS	0.33	50	50	ENSMUST00000073488.12	ENSMUSG00000060601.14	Nr1h2	chr7	protein_coding	nuclear receptor subfamily 1, group H, member 2
chr7	44201767	44201931	-	44201660	44201931	A3SS	0.25	50	50	ENSMUST00000107911.8	ENSMUSG00000060601.14	Nr1h2	chr7	protein_coding	nuclear receptor subfamily 1, group H, member 2
chr7	44201788	44201931	-	44201660	44201931	A3SS	0.25	50	50	ENSMUST00000107911.8	ENSMUSG00000060601.14	Nr1h2	chr7	protein_coding	nuclear receptor subfamily 1, group H, member 2
chr7	44203132	44203247	-	44203132	44203229	A5SS	0.33	50	50	ENSMUST00000167197.8	ENSMUSG00000060601.14	Nr1h2	chr7	protein_coding	nuclear receptor subfamily 1, group H, member 2
chr7	44202044;44202143	44202121;44203003	-	44202044	44203003	cassetteExon	0.5	100	100	ENSMUST00000209017.2	ENSMUSG00000060601.14	Nr1h2	chr7	protein_coding	nuclear receptor subfamily 1, group H, member 2
chr7	44201788	44201931	-	44201767	44201931	A3SS	0.25	50	50	ENSMUST00000207550.2	ENSMUSG00000060601.14	Nr1h2	chr7	protein_coding	nuclear receptor subfamily 1, group H, member 2
chr7	44202044	44203003	-	44202044	44202121	5pMXE	0.5	50	50	ENSMUST00000142298.2	ENSMUSG00000060601.14	Nr1h2	chr7	protein_coding	nuclear receptor subfamily 1, group H, member 2
chr7	44202044	44203003	-	44202178	44203003	3pMXE	0.25	50	50	ENSMUST00000136611.2	ENSMUSG00000060601.14	Nr1h2	chr7	protein_coding	nuclear receptor subfamily 1, group H, member 2
chr7	44231965;44232333	44232122;44234423	+	44231965	44234423	cassetteExon	0.5	100	100	ENSMUST00000002274.10	ENSMUSG00000002204.10	Napsa	chr7	protein_coding	napsin A aspartic peptidase
chr7	44245692	44247808	+	44245692;44247043	44247014;44247808	ES	0.5	50	50	ENSMUST00000209177.2	ENSMUSG00000062785.15	Kcnc3	chr7	protein_coding	potassium voltage gated channel, Shaw-related subfamily, member 3
chr7	44245692	44247805	+	44245692	44247014	A3SS&ES	0.33	50	50	ENSMUST00000209177.2	ENSMUSG00000062785.15	Kcnc3	chr7	protein_coding	potassium voltage gated channel, Shaw-related subfamily, member 3
chr7	44247999	44250293	+	44247999	44248230	A3SS&ES	0.5	50	50	ENSMUST00000209177.2	ENSMUSG00000062785.15	Kcnc3	chr7	protein_coding	potassium voltage gated channel, Shaw-related subfamily, member 3
chr7	44248357	44250293	+	44248357	44250098	A3SS	0.5	50	50	ENSMUST00000209177.2	ENSMUSG00000062785.15	Kcnc3	chr7	protein_coding	potassium voltage gated channel, Shaw-related subfamily, member 3
chr7	44243564	44244585	+	44241182	44244585	A5SS	0.5	50	50	ENSMUST00000209177.2	ENSMUSG00000062785.15	Kcnc3	chr7	protein_coding	potassium voltage gated channel, Shaw-related subfamily, member 3
chr7	44247999	44251293	+	44247999;44250352	44250293;44251293	ES	0.5	50	50	ENSMUST00000207493.2	ENSMUSG00000062785.15	Kcnc3	chr7	protein_coding	potassium voltage gated channel, Shaw-related subfamily, member 3
chr7	44247999;44248357	44248230;44250293	+	44247999	44250293	cassetteExon	0.5	100	100	ENSMUST00000207493.2	ENSMUSG00000062785.15	Kcnc3	chr7	protein_coding	potassium voltage gated channel, Shaw-related subfamily, member 3
chr7	44245692	44247808	+	44245692	44247805	A3SS	0.33	50	50	ENSMUST00000207493.2	ENSMUSG00000062785.15	Kcnc3	chr7	protein_coding	potassium voltage gated channel, Shaw-related subfamily, member 3
chr7	44247999	44248230	+	44247999	44251293	A3SS	0.33	50	50	ENSMUST00000107907.10	ENSMUSG00000062785.15	Kcnc3	chr7	protein_coding	potassium voltage gated channel, Shaw-related subfamily, member 3
chr7	44283970;44285000	44284878;44287189	-	44283970	44287189	cassetteExon	0.5	100	100	ENSMUST00000107899.10	ENSMUSG00000030739.19	Myh14	chr7	protein_coding	myosin, heavy polypeptide 14
chr7	44305108;44306864	44306841;44307359	-	44305108	44307359	cassetteExon	0.5	100	100	ENSMUST00000107899.10	ENSMUSG00000030739.19	Myh14	chr7	protein_coding	myosin, heavy polypeptide 14
chr7	44263154	44263375	-	44263154	44263717	A5SS	0.5	50	50	ENSMUST00000107899.10	ENSMUSG00000030739.19	Myh14	chr7	protein_coding	myosin, heavy polypeptide 14
chr7	44279487	44279659	-	44279487	44280138	A5SS	0.5	50	50	ENSMUST00000107899.10	ENSMUSG00000030739.19	Myh14	chr7	protein_coding	myosin, heavy polypeptide 14
chr7	44281967	44282175	-	44281967	44282359	A5SS	0.5	50	50	ENSMUST00000107899.10	ENSMUSG00000030739.19	Myh14	chr7	protein_coding	myosin, heavy polypeptide 14
chr7	44305108	44307335	-	44305108	44307359	A5SS	0.33	50	50	ENSMUST00000107899.10	ENSMUSG00000030739.19	Myh14	chr7	protein_coding	myosin, heavy polypeptide 14
chr7	44305108	44307335	-	44305108	44306841	A5SS&ES	0.33	50	50	ENSMUST00000048102.15	ENSMUSG00000030739.19	Myh14	chr7	protein_coding	myosin, heavy polypeptide 14
chr7	44314924	44318667	-	44314924	44320224	A5SS	0.5	50	50	ENSMUST00000048102.15	ENSMUSG00000030739.19	Myh14	chr7	protein_coding	myosin, heavy polypeptide 14
chr7	44326785	44327176	+	44320023	44327176	A5SS	0.5	50	50	ENSMUST00000209111.2	ENSMUSG00000070574.3	2310016G11Rik	chr7	lncRNA	RIKEN cDNA 2310016G11 gene
chr7	44359955;44362502	44362422;44364752	+	44359955	44364752	cassetteExon	0.5	100	100	ENSMUST00000085422.4	ENSMUSG00000066500.6	Izumo2	chr7	protein_coding	IZUMO family member 2
chr7	44364875	44369182	+	44364875	44369167	A3SS	0.5	50	50	ENSMUST00000085422.4	ENSMUSG00000066500.6	Izumo2	chr7	protein_coding	IZUMO family member 2
chr7	44358394	44358480	+	44358398	44358480	A5SS	0.5	50	50	ENSMUST00000085422.4	ENSMUSG00000066500.6	Izumo2	chr7	protein_coding	IZUMO family member 2
chr7	44387455	44388927	-	44387458	44388927	A3SS	0.5	50	50	ENSMUST00000149011.9	ENSMUSG00000048012.20	Zfp473	chr7	protein_coding	zinc finger protein 473
chr7	44391289	44397334	-	44391289	44397776	A5SS	0.25	50	50	ENSMUST00000060270.13	ENSMUSG00000048012.20	Zfp473	chr7	protein_coding	zinc finger protein 473
chr7	44391289	44397360	-	44391289	44397776	A5SS	0.25	50	50	ENSMUST00000060270.13	ENSMUSG00000048012.20	Zfp473	chr7	protein_coding	zinc finger protein 473
chr7	44391289	44397653	-	44391289	44397776	A5SS	0.25	50	50	ENSMUST00000060270.13	ENSMUSG00000048012.20	Zfp473	chr7	protein_coding	zinc finger protein 473
chr7	44391289	44397653	-	44391289	44397360	5pMXE	0.25	50	50	ENSMUST00000120074.8	ENSMUSG00000048012.20	Zfp473	chr7	protein_coding	zinc finger protein 473
chr7	44391289	44397334	-	44391289	44397360	A5SS	0.25	50	50	ENSMUST00000120074.8	ENSMUSG00000048012.20	Zfp473	chr7	protein_coding	zinc finger protein 473
chr7	44391289	44397334	-	44391289	44397653	A5SS	0.25	50	50	ENSMUST00000118162.8	ENSMUSG00000048012.20	Zfp473	chr7	protein_coding	zinc finger protein 473
chr7	44398075	44403240	+	44398075;44401600	44401539;44403240	ES	0.5	50	50	ENSMUST00000002275.15	ENSMUSG00000002205.17	Vrk3	chr7	protein_coding	vaccinia related kinase 3
chr7	44407319	44410302	+	44407319;44409318	44409124;44410302	ES	0.5	50	50	ENSMUST00000002275.15	ENSMUSG00000002205.17	Vrk3	chr7	protein_coding	vaccinia related kinase 3
chr7	44409318	44412415	+	44409318;44410366	44410302;44412415	ES	0.5	50	50	ENSMUST00000002275.15	ENSMUSG00000002205.17	Vrk3	chr7	protein_coding	vaccinia related kinase 3
chr7	44420346	44426646	+	44420346;44424959	44424800;44426646	ES	0.5	50	50	ENSMUST00000002275.15	ENSMUSG00000002205.17	Vrk3	chr7	protein_coding	vaccinia related kinase 3
chr7	44407319	44408449	+	44407319	44409124	A3SS	0.25	50	50	ENSMUST00000002275.15	ENSMUSG00000002205.17	Vrk3	chr7	protein_coding	vaccinia related kinase 3
chr7	44407319	44408466	+	44407319	44409124	A3SS	0.25	50	50	ENSMUST00000002275.15	ENSMUSG00000002205.17	Vrk3	chr7	protein_coding	vaccinia related kinase 3
chr7	44398153	44401539	+	44398075	44401539	A5SS	0.33	50	50	ENSMUST00000002275.15	ENSMUSG00000002205.17	Vrk3	chr7	protein_coding	vaccinia related kinase 3
chr7	44398821	44401539	+	44398075	44401539	A5SS	0.33	50	50	ENSMUST00000002275.15	ENSMUSG00000002205.17	Vrk3	chr7	protein_coding	vaccinia related kinase 3
chr7	44407319	44410302	+	44407319	44409124	3pMXE	0.25	50	50	ENSMUST00000171821.8	ENSMUSG00000002205.17	Vrk3	chr7	protein_coding	vaccinia related kinase 3
chr7	44407319;44410366	44410302;44412415	+	44407319;44409318	44409124;44412415	MXE	0.5	100	100	ENSMUST00000147952.9	ENSMUSG00000002205.17	Vrk3	chr7	protein_coding	vaccinia related kinase 3
chr7	44398075	44403240	+	44401600	44403240	A5SS&ES	0.5	50	50	ENSMUST00000165957.8	ENSMUSG00000002205.17	Vrk3	chr7	protein_coding	vaccinia related kinase 3
chr7	44398821	44401539	+	44398153	44401539	A5SS	0.33	50	50	ENSMUST00000165957.8	ENSMUSG00000002205.17	Vrk3	chr7	protein_coding	vaccinia related kinase 3
chr7	44407319	44408449	+	44407319	44410302	A3SS	0.25	50	50	ENSMUST00000144515.9	ENSMUSG00000002205.17	Vrk3	chr7	protein_coding	vaccinia related kinase 3
chr7	44407319	44408466	+	44407319	44410302	A3SS	0.25	50	50	ENSMUST00000144515.9	ENSMUSG00000002205.17	Vrk3	chr7	protein_coding	vaccinia related kinase 3
chr7	44407319	44408466	+	44407319	44408449	A3SS	0.25	50	50	ENSMUST00000136069.9	ENSMUSG00000002205.17	Vrk3	chr7	protein_coding	vaccinia related kinase 3
chr7	44462666	44464413	-	44462944	44464413	A3SS	0.5	50	50	ENSMUST00000047356.11	ENSMUSG00000038539.16	Atf5	chr7	protein_coding	activating transcription factor 5
chr7	44464706	44464906	-	44464706	44465826	A5SS	0.5	50	50	ENSMUST00000047356.11	ENSMUSG00000038539.16	Atf5	chr7	protein_coding	activating transcription factor 5
chr7	44465896	44481540	+	44465896	44477911	3pMXE	0.5	50	50	ENSMUST00000208626.2	ENSMUSG00000109511.2	Nup62	chr7	protein_coding	nucleoporin 62
chr7	44465883	44477911	+	44465896	44477911	A5SS	0.2	50	50	ENSMUST00000208626.2	ENSMUSG00000109511.2	Nup62	chr7	protein_coding	nucleoporin 62
chr7	44465902	44477911	+	44465896	44477911	A5SS	0.2	50	50	ENSMUST00000208626.2	ENSMUSG00000109511.2	Nup62	chr7	protein_coding	nucleoporin 62
chr7	44465907	44477911	+	44465896	44477911	A5SS	0.2	50	50	ENSMUST00000208626.2	ENSMUSG00000109511.2	Nup62	chr7	protein_coding	nucleoporin 62
chr7	44467992	44477911	+	44465896	44477911	A5SS	0.2	50	50	ENSMUST00000208626.2	ENSMUSG00000109511.2	Nup62	chr7	protein_coding	nucleoporin 62
chr7	44465907	44481540	+	44465907	44477911	3pMXE	0.5	50	50	ENSMUST00000057195.17	ENSMUSG00000109511.2	Nup62	chr7	protein_coding	nucleoporin 62
chr7	44465883	44477911	+	44465907	44477911	A5SS	0.2	50	50	ENSMUST00000057195.17	ENSMUSG00000109511.2	Nup62	chr7	protein_coding	nucleoporin 62
chr7	44465902	44477911	+	44465907	44477911	A5SS	0.2	50	50	ENSMUST00000057195.17	ENSMUSG00000109511.2	Nup62	chr7	protein_coding	nucleoporin 62
chr7	44467992	44477911	+	44465907	44477911	A5SS	0.2	50	50	ENSMUST00000057195.17	ENSMUSG00000109511.2	Nup62	chr7	protein_coding	nucleoporin 62
chr7	44465902	44477911	+	44465883	44477911	A5SS	0.2	50	50	ENSMUST00000208172.2	ENSMUSG00000109511.2	Nup62	chr7	protein_coding	nucleoporin 62
chr7	44467992	44477911	+	44465883	44477911	A5SS	0.2	50	50	ENSMUST00000208172.2	ENSMUSG00000109511.2	Nup62	chr7	protein_coding	nucleoporin 62
chr7	44467992	44477911	+	44465902	44477911	A5SS	0.2	50	50	ENSMUST00000207103.2	ENSMUSG00000109511.2	Nup62	chr7	protein_coding	nucleoporin 62
chr7	44481605	44483375	+	44481605	44482018	3pMXE	0.5	50	50	ENSMUST00000149779.2	ENSMUSG00000074141.14	Il4i1	chr7	protein_coding	interleukin 4 induced 1
chr7	44465907	44481540	+	44465896	44481540	A5SS	0.5	50	50	ENSMUST00000149779.2	ENSMUSG00000074141.14	Il4i1	chr7	protein_coding	interleukin 4 induced 1
chr7	44485961	44486055	+	44483516	44486055	A5SS	0.5	50	50	ENSMUST00000118125.9	ENSMUSG00000074141.14	Il4i1	chr7	protein_coding	interleukin 4 induced 1
chr7	44492287	44492419	-	44492340	44492419	A3SS	0.5	50	50	ENSMUST00000047085.16	ENSMUSG00000038520.16	Tbc1d17	chr7	protein_coding	TBC1 domain family, member 17
chr7	44494752	44495299	-	44494792	44495299	A3SS	0.5	50	50	ENSMUST00000047085.16	ENSMUSG00000038520.16	Tbc1d17	chr7	protein_coding	TBC1 domain family, member 17
chr7	44495500	44496185	-	44495506	44496185	A3SS	0.5	50	50	ENSMUST00000047085.16	ENSMUSG00000038520.16	Tbc1d17	chr7	protein_coding	TBC1 domain family, member 17
chr7	44497943	44498273	-	44497958	44498273	A3SS	0.5	50	50	ENSMUST00000047085.16	ENSMUSG00000038520.16	Tbc1d17	chr7	protein_coding	TBC1 domain family, member 17
chr7	44491523	44491610	-	44491523	44491627	A5SS	0.5	50	50	ENSMUST00000047085.16	ENSMUSG00000038520.16	Tbc1d17	chr7	protein_coding	TBC1 domain family, member 17
chr7	44498772	44503204	+	44498772;44502383	44501995;44503204	ES	0.5	50	50	ENSMUST00000107885.8	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44502383	44503186	+	44502383	44503204	A3SS	0.5	50	50	ENSMUST00000107885.8	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44499113	44501995	+	44498772	44501995	A5SS	0.12	50	50	ENSMUST00000107885.8	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44499430	44501995	+	44498772	44501995	A5SS	0.12	50	50	ENSMUST00000107885.8	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44499679	44501995	+	44498772	44501995	A5SS	0.12	50	50	ENSMUST00000107885.8	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44499700	44501995	+	44498772	44501995	A5SS	0.12	50	50	ENSMUST00000107885.8	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44499720	44501995	+	44498772	44501995	A5SS	0.12	50	50	ENSMUST00000107885.8	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44499858	44501995	+	44498772	44501995	A5SS	0.12	50	50	ENSMUST00000107885.8	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44500029	44501995	+	44498772	44501995	A5SS	0.12	50	50	ENSMUST00000107885.8	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44498772	44503204	+	44502383	44503204	A5SS&ES	0.5	50	50	ENSMUST00000152091.8	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44499113	44501995	+	44499430	44501995	A5SS	0.12	50	50	ENSMUST00000152091.8	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44499679	44501995	+	44499430	44501995	A5SS	0.12	50	50	ENSMUST00000152091.8	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44499700	44501995	+	44499430	44501995	A5SS	0.12	50	50	ENSMUST00000152091.8	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44499720	44501995	+	44499430	44501995	A5SS	0.12	50	50	ENSMUST00000152091.8	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44499858	44501995	+	44499430	44501995	A5SS	0.12	50	50	ENSMUST00000152091.8	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44500029	44501995	+	44499430	44501995	A5SS	0.12	50	50	ENSMUST00000152091.8	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44499679	44501995	+	44499113	44501995	A5SS	0.12	50	50	ENSMUST00000150335.2	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44499700	44501995	+	44499113	44501995	A5SS	0.12	50	50	ENSMUST00000150335.2	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44499720	44501995	+	44499113	44501995	A5SS	0.12	50	50	ENSMUST00000150335.2	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44499858	44501995	+	44499113	44501995	A5SS	0.12	50	50	ENSMUST00000150335.2	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44500029	44501995	+	44499113	44501995	A5SS	0.12	50	50	ENSMUST00000150335.2	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44499679	44501995	+	44499700	44501995	A5SS	0.12	50	50	ENSMUST00000141311.8	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44499720	44501995	+	44499700	44501995	A5SS	0.12	50	50	ENSMUST00000141311.8	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44499858	44501995	+	44499700	44501995	A5SS	0.12	50	50	ENSMUST00000141311.8	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44500029	44501995	+	44499700	44501995	A5SS	0.12	50	50	ENSMUST00000141311.8	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44499679	44501995	+	44499720	44501995	A5SS	0.12	50	50	ENSMUST00000107880.9	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44499858	44501995	+	44499720	44501995	A5SS	0.12	50	50	ENSMUST00000107880.9	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44500029	44501995	+	44499720	44501995	A5SS	0.12	50	50	ENSMUST00000107880.9	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44499858	44501995	+	44499679	44501995	A5SS	0.12	50	50	ENSMUST00000208384.2	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44500029	44501995	+	44499679	44501995	A5SS	0.12	50	50	ENSMUST00000208384.2	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44500029	44501995	+	44499858	44501995	A5SS	0.12	50	50	ENSMUST00000136232.2	ENSMUSG00000011096.18	Akt1s1	chr7	protein_coding	AKT1 substrate 1 (proline-rich)
chr7	44506978	44507877	+	44506978;44507633	44507587;44507877	ES	0.5	50	50	ENSMUST00000107876.8	ENSMUSG00000002963.18	Pnkp	chr7	protein_coding	polynucleotide kinase 3'- phosphatase
chr7	44508173	44509312	+	44508173;44509226	44509147;44509312	ES	0.5	50	50	ENSMUST00000107876.8	ENSMUSG00000002963.18	Pnkp	chr7	protein_coding	polynucleotide kinase 3'- phosphatase
chr7	44509369	44509784	+	44509369;44509608	44509501;44509784	ES	0.5	50	50	ENSMUST00000107876.8	ENSMUSG00000002963.18	Pnkp	chr7	protein_coding	polynucleotide kinase 3'- phosphatase
chr7	44510663	44510924	+	44510663;44510838	44510742;44510924	ES	0.5	50	50	ENSMUST00000107876.8	ENSMUSG00000002963.18	Pnkp	chr7	protein_coding	polynucleotide kinase 3'- phosphatase
chr7	44510985	44511618	+	44510985;44511182	44511073;44511618	ES	0.5	50	50	ENSMUST00000107876.8	ENSMUSG00000002963.18	Pnkp	chr7	protein_coding	polynucleotide kinase 3'- phosphatase
chr7	44506978	44507526	+	44506978	44507587	A3SS	0.33	50	50	ENSMUST00000107876.8	ENSMUSG00000002963.18	Pnkp	chr7	protein_coding	polynucleotide kinase 3'- phosphatase
chr7	44510483	44510613	+	44510483	44510571	A3SS	0.5	50	50	ENSMUST00000107876.8	ENSMUSG00000002963.18	Pnkp	chr7	protein_coding	polynucleotide kinase 3'- phosphatase
chr7	44511851	44511927	+	44511851	44511923	A3SS	0.33	50	50	ENSMUST00000107876.8	ENSMUSG00000002963.18	Pnkp	chr7	protein_coding	polynucleotide kinase 3'- phosphatase
chr7	44511851	44511993	+	44511851	44511923	A3SS	0.33	50	50	ENSMUST00000107876.8	ENSMUSG00000002963.18	Pnkp	chr7	protein_coding	polynucleotide kinase 3'- phosphatase
chr7	44506676	44506819	+	44506726	44506819	A5SS	0.5	50	50	ENSMUST00000107876.8	ENSMUSG00000002963.18	Pnkp	chr7	protein_coding	polynucleotide kinase 3'- phosphatase
chr7	44508173;44509608	44509501;44509784	+	44508173;44509369	44509147;44509784	MXE	0.5	100	100	ENSMUST00000145850.8	ENSMUSG00000002963.18	Pnkp	chr7	protein_coding	polynucleotide kinase 3'- phosphatase
chr7	44506978	44507877	+	44506978	44507587	A3SS	0.33	50	50	ENSMUST00000145850.8	ENSMUSG00000002963.18	Pnkp	chr7	protein_coding	polynucleotide kinase 3'- phosphatase
chr7	44506978;44507633	44507526;44507877	+	44506978	44507877	cassetteExon	0.5	100	100	ENSMUST00000139003.8	ENSMUSG00000002963.18	Pnkp	chr7	protein_coding	polynucleotide kinase 3'- phosphatase
chr7	44510663	44510924	+	44510663	44510742	3pMXE	0.5	50	50	ENSMUST00000124168.8	ENSMUSG00000002963.18	Pnkp	chr7	protein_coding	polynucleotide kinase 3'- phosphatase
chr7	44508173	44509312	+	44508173	44509147	A3SS	0.33	50	50	ENSMUST00000124168.8	ENSMUSG00000002963.18	Pnkp	chr7	protein_coding	polynucleotide kinase 3'- phosphatase
chr7	44508173	44509501	+	44508173	44509147	A3SS&ES	0.33	50	50	ENSMUST00000124168.8	ENSMUSG00000002963.18	Pnkp	chr7	protein_coding	polynucleotide kinase 3'- phosphatase
chr7	44509369	44509501	+	44509369	44510413	A3SS	0.33	50	50	ENSMUST00000124168.8	ENSMUSG00000002963.18	Pnkp	chr7	protein_coding	polynucleotide kinase 3'- phosphatase
chr7	44509369	44509784	+	44509369	44510413	A3SS	0.33	50	50	ENSMUST00000124168.8	ENSMUSG00000002963.18	Pnkp	chr7	protein_coding	polynucleotide kinase 3'- phosphatase
chr7	44510335	44510413	+	44509369	44510413	A5SS	0.5	50	50	ENSMUST00000124168.8	ENSMUSG00000002963.18	Pnkp	chr7	protein_coding	polynucleotide kinase 3'- phosphatase
chr7	44508173	44509501	+	44508173;44509369	44509312;44509501	ES	0.5	50	50	ENSMUST00000123015.8	ENSMUSG00000002963.18	Pnkp	chr7	protein_coding	polynucleotide kinase 3'- phosphatase
chr7	44508173;44509369	44509147;44509501	+	44508173	44509501	cassetteExon	0.5	100	100	ENSMUST00000208666.2	ENSMUSG00000002963.18	Pnkp	chr7	protein_coding	polynucleotide kinase 3'- phosphatase
chr7	44508173;44509369	44509147;44510413	+	44508173;44510335	44509501;44510413	MXE	0.5	100	100	ENSMUST00000208666.2	ENSMUSG00000002963.18	Pnkp	chr7	protein_coding	polynucleotide kinase 3'- phosphatase
chr7	44508173;44509369	44509312;44509784	+	44508173;44509608	44509501;44509784	MXE	0.5	100	100	ENSMUST00000208666.2	ENSMUSG00000002963.18	Pnkp	chr7	protein_coding	polynucleotide kinase 3'- phosphatase
chr7	44508173;44509369	44509312;44510413	+	44508173;44510335	44509501;44510413	MXE	0.5	100	100	ENSMUST00000208666.2	ENSMUSG00000002963.18	Pnkp	chr7	protein_coding	polynucleotide kinase 3'- phosphatase
chr7	44510985	44511618	+	44510985	44511073	3pMXE	0.5	50	50	ENSMUST00000126860.6	ENSMUSG00000002963.18	Pnkp	chr7	protein_coding	polynucleotide kinase 3'- phosphatase
chr7	44510663	44510924	+	44510838	44510924	5pMXE	0.5	50	50	ENSMUST00000202646.4	ENSMUSG00000002963.18	Pnkp	chr7	protein_coding	polynucleotide kinase 3'- phosphatase
chr7	44511851	44511927	+	44511851	44511993	A3SS	0.33	50	50	ENSMUST00000202646.4	ENSMUSG00000002963.18	Pnkp	chr7	protein_coding	polynucleotide kinase 3'- phosphatase
chr7	44510985	44511618	+	44511182	44511618	5pMXE	0.5	50	50	ENSMUST00000144669.3	ENSMUSG00000002963.18	Pnkp	chr7	protein_coding	polynucleotide kinase 3'- phosphatase
chr7	44513048	44513807	-	44513156	44513807	A3SS	0.5	50	50	ENSMUST00000207416.2	ENSMUSG00000038502.18	Ptov1	chr7	protein_coding	prostate tumor over expressed gene 1
chr7	44514090	44514186	-	44514093	44514186	A3SS	0.5	50	50	ENSMUST00000207416.2	ENSMUSG00000038502.18	Ptov1	chr7	protein_coding	prostate tumor over expressed gene 1
chr7	44515047	44516234	-	44515051	44516234	A3SS	0.5	50	50	ENSMUST00000046575.17	ENSMUSG00000038502.18	Ptov1	chr7	protein_coding	prostate tumor over expressed gene 1
chr7	44516936	44518289	-	44516936	44518775	A5SS	0.5	50	50	ENSMUST00000046575.17	ENSMUSG00000038502.18	Ptov1	chr7	protein_coding	prostate tumor over expressed gene 1
chr7	44516341	44516484	-	44513911	44516484	A3SS	0.5	50	50	ENSMUST00000209018.2	ENSMUSG00000038502.18	Ptov1	chr7	protein_coding	prostate tumor over expressed gene 1
chr7	44513911	44514036	-	44513911	44516484	A5SS	0.5	50	50	ENSMUST00000209018.2	ENSMUSG00000038502.18	Ptov1	chr7	protein_coding	prostate tumor over expressed gene 1
chr7	44529894	44530347	-	44529894;44530062	44529991;44530347	ES	0.33	50	50	ENSMUST00000208253.2	ENSMUSG00000002968.10	Med25	chr7	protein_coding	mediator complex subunit 25
chr7	44535694	44541523	-	44535694;44541331	44541207;44541523	ES	0.5	50	50	ENSMUST00000208253.2	ENSMUSG00000002968.10	Med25	chr7	protein_coding	mediator complex subunit 25
chr7	44535694;44538890	44538711;44541207	-	44535694	44541207	cassetteExon	0.5	100	100	ENSMUST00000208253.2	ENSMUSG00000002968.10	Med25	chr7	protein_coding	mediator complex subunit 25
chr7	44535694;44538941	44538711;44541207	-	44535694	44541207	cassetteExon	0.5	100	100	ENSMUST00000208253.2	ENSMUSG00000002968.10	Med25	chr7	protein_coding	mediator complex subunit 25
chr7	44528938	44529351	-	44527714	44529351	A3SS	0.5	50	50	ENSMUST00000208253.2	ENSMUSG00000002968.10	Med25	chr7	protein_coding	mediator complex subunit 25
chr7	44529888	44530347	-	44530062	44530347	A3SS&ES	0.33	50	50	ENSMUST00000208253.2	ENSMUSG00000002968.10	Med25	chr7	protein_coding	mediator complex subunit 25
chr7	44533388	44533543	-	44532608	44533543	A3SS	0.5	50	50	ENSMUST00000208253.2	ENSMUSG00000002968.10	Med25	chr7	protein_coding	mediator complex subunit 25
chr7	44533674	44533987	-	44533671	44533987	A3SS	0.5	50	50	ENSMUST00000208253.2	ENSMUSG00000002968.10	Med25	chr7	protein_coding	mediator complex subunit 25
chr7	44541331	44541489	-	44541331	44541523	A5SS	0.33	50	50	ENSMUST00000208253.2	ENSMUSG00000002968.10	Med25	chr7	protein_coding	mediator complex subunit 25
chr7	44529888	44530347	-	44529894	44530347	A3SS	0.33	50	50	ENSMUST00000207278.2	ENSMUSG00000002968.10	Med25	chr7	protein_coding	mediator complex subunit 25
chr7	44535694	44541523	-	44535694	44541207	A5SS&ES	0.33	50	50	ENSMUST00000207278.2	ENSMUSG00000002968.10	Med25	chr7	protein_coding	mediator complex subunit 25
chr7	44541331	44541489	-	44541331	44541569	A5SS	0.33	50	50	ENSMUST00000207278.2	ENSMUSG00000002968.10	Med25	chr7	protein_coding	mediator complex subunit 25
chr7	44541331	44541523	-	44541331	44541569	A5SS	0.33	50	50	ENSMUST00000207278.2	ENSMUSG00000002968.10	Med25	chr7	protein_coding	mediator complex subunit 25
chr7	44529894	44530347	-	44530062	44530347	A3SS	0.33	50	50	ENSMUST00000207206.2	ENSMUSG00000002968.10	Med25	chr7	protein_coding	mediator complex subunit 25
chr7	44538890	44541207	-	44538941	44541207	A3SS	0.33	50	50	ENSMUST00000207654.2	ENSMUSG00000002968.10	Med25	chr7	protein_coding	mediator complex subunit 25
chr7	44535694	44538711	-	44535694	44541523	A5SS	0.33	50	50	ENSMUST00000207788.2	ENSMUSG00000002968.10	Med25	chr7	protein_coding	mediator complex subunit 25
chr7	44535694	44541523	-	44541331	44541523	3pMXE	0.5	50	50	ENSMUST00000207196.2	ENSMUSG00000002968.10	Med25	chr7	protein_coding	mediator complex subunit 25
chr7	44545786	44546339	+	44545786;44546092	44545971;44546339	ES	0.33	50	50	ENSMUST00000071207.14	ENSMUSG00000011658.17	Fuz	chr7	protein_coding	fuzzy planar cell polarity protein
chr7	44546092	44546685	+	44546092;44546423	44546339;44546685	ES	0.25	50	50	ENSMUST00000071207.14	ENSMUSG00000011658.17	Fuz	chr7	protein_coding	fuzzy planar cell polarity protein
chr7	44547048	44548200	+	44547048;44548124	44547927;44548200	ES	0.5	50	50	ENSMUST00000071207.14	ENSMUSG00000011658.17	Fuz	chr7	protein_coding	fuzzy planar cell polarity protein
chr7	44548810	44550672	+	44548810	44549557	3pMXE	0.33	50	50	ENSMUST00000071207.14	ENSMUSG00000011658.17	Fuz	chr7	protein_coding	fuzzy planar cell polarity protein
chr7	44548810	44550795	+	44548810	44549557	3pMXE	0.33	50	50	ENSMUST00000071207.14	ENSMUSG00000011658.17	Fuz	chr7	protein_coding	fuzzy planar cell polarity protein
chr7	44547048	44547940	+	44547048	44547927	A3SS	0.33	50	50	ENSMUST00000071207.14	ENSMUSG00000011658.17	Fuz	chr7	protein_coding	fuzzy planar cell polarity protein
chr7	44546069	44546685	+	44546423	44546685	A5SS&ES	0.25	50	50	ENSMUST00000071207.14	ENSMUSG00000011658.17	Fuz	chr7	protein_coding	fuzzy planar cell polarity protein
chr7	44546144	44546339	+	44546092	44546339	A5SS	0.33	50	50	ENSMUST00000071207.14	ENSMUSG00000011658.17	Fuz	chr7	protein_coding	fuzzy planar cell polarity protein
chr7	44546768	44546944	+	44546753	44546944	A5SS	0.5	50	50	ENSMUST00000071207.14	ENSMUSG00000011658.17	Fuz	chr7	protein_coding	fuzzy planar cell polarity protein
chr7	44547048	44548200	+	44547048;44548124	44547940;44548200	ES	0.5	50	50	ENSMUST00000208600.2	ENSMUSG00000011658.17	Fuz	chr7	protein_coding	fuzzy planar cell polarity protein
chr7	44548810	44550795	+	44548810	44550672	A3SS	0.33	50	50	ENSMUST00000208291.2	ENSMUSG00000011658.17	Fuz	chr7	protein_coding	fuzzy planar cell polarity protein
chr7	44547048	44548200	+	44548124	44548200	A5SS	0.5	50	50	ENSMUST00000207480.2	ENSMUSG00000011658.17	Fuz	chr7	protein_coding	fuzzy planar cell polarity protein
chr7	44545786;44546069	44545971;44546685	+	44545786	44546685	cassetteExon	0.5	100	100	ENSMUST00000207069.2	ENSMUSG00000011658.17	Fuz	chr7	protein_coding	fuzzy planar cell polarity protein
chr7	44545786;44546092	44545971;44546685	+	44545786	44546685	cassetteExon	0.5	100	100	ENSMUST00000207069.2	ENSMUSG00000011658.17	Fuz	chr7	protein_coding	fuzzy planar cell polarity protein
chr7	44545786;44546423	44545971;44546685	+	44545786	44546685	cassetteExon	0.5	100	100	ENSMUST00000207069.2	ENSMUSG00000011658.17	Fuz	chr7	protein_coding	fuzzy planar cell polarity protein
chr7	44545786;44546423	44546339;44546685	+	44545786	44546685	cassetteExon	0.5	100	100	ENSMUST00000207069.2	ENSMUSG00000011658.17	Fuz	chr7	protein_coding	fuzzy planar cell polarity protein
chr7	44545786	44546339	+	44545786;44546144	44545971;44546339	ES	0.33	50	50	ENSMUST00000207154.2	ENSMUSG00000011658.17	Fuz	chr7	protein_coding	fuzzy planar cell polarity protein
chr7	44547048	44548200	+	44547048	44547927	3pMXE	0.33	50	50	ENSMUST00000207154.2	ENSMUSG00000011658.17	Fuz	chr7	protein_coding	fuzzy planar cell polarity protein
chr7	44546092	44546685	+	44546423	44546685	A5SS&ES	0.25	50	50	ENSMUST00000207154.2	ENSMUSG00000011658.17	Fuz	chr7	protein_coding	fuzzy planar cell polarity protein
chr7	44545786;44546069	44545971;44546685	+	44545786;44546423	44546339;44546685	MXE	0.5	100	100	ENSMUST00000207939.3	ENSMUSG00000011658.17	Fuz	chr7	protein_coding	fuzzy planar cell polarity protein
chr7	44545786;44546092	44545971;44546685	+	44545786;44546423	44546339;44546685	MXE	0.5	100	100	ENSMUST00000207939.3	ENSMUSG00000011658.17	Fuz	chr7	protein_coding	fuzzy planar cell polarity protein
chr7	44546092	44546685	+	44546069	44546685	A5SS	0.25	50	50	ENSMUST00000207485.2	ENSMUSG00000011658.17	Fuz	chr7	protein_coding	fuzzy planar cell polarity protein
chr7	44552624	44553165	-	44552624;44552951	44552886;44553165	ES	0.5	50	50	ENSMUST00000166972.9	ENSMUSG00000060279.15	Ap2a1	chr7	protein_coding	adaptor-related protein complex 2, alpha 1 subunit
chr7	44565894;44573339	44573231;44578704	-	44565894	44578704	cassetteExon	0.5	100	100	ENSMUST00000166972.9	ENSMUSG00000060279.15	Ap2a1	chr7	protein_coding	adaptor-related protein complex 2, alpha 1 subunit
chr7	44558798	44559123	-	44558745	44559123	A3SS	0.5	50	50	ENSMUST00000166972.9	ENSMUSG00000060279.15	Ap2a1	chr7	protein_coding	adaptor-related protein complex 2, alpha 1 subunit
chr7	44565894	44577954	-	44565894	44578704	A5SS	0.33	50	50	ENSMUST00000166972.9	ENSMUSG00000060279.15	Ap2a1	chr7	protein_coding	adaptor-related protein complex 2, alpha 1 subunit
chr7	44565894	44577954	-	44565894	44573231	A5SS&ES	0.33	50	50	ENSMUST00000208405.2	ENSMUSG00000060279.15	Ap2a1	chr7	protein_coding	adaptor-related protein complex 2, alpha 1 subunit
chr7	44592877	44593206	+	44592673	44593206	A5SS	0.5	50	50	ENSMUST00000207719.2	ENSMUSG00000059891.15	Tsks	chr7	protein_coding	testis-specific serine kinase substrate
chr7	44600546	44601287	+	44600546	44601260	A3SS	0.5	50	50	ENSMUST00000120929.9	ENSMUSG00000059891.15	Tsks	chr7	protein_coding	testis-specific serine kinase substrate
chr7	44606011	44606978	+	44606011	44607021	A3SS	0.5	50	50	ENSMUST00000120929.9	ENSMUSG00000059891.15	Tsks	chr7	protein_coding	testis-specific serine kinase substrate
chr7	44607177	44607280	+	44607145	44607280	A5SS	0.5	50	50	ENSMUST00000120929.9	ENSMUSG00000059891.15	Tsks	chr7	protein_coding	testis-specific serine kinase substrate
chr7	44610334	44610943	-	44610433	44610943	A3SS	0.5	50	50	ENSMUST00000211901.2	ENSMUSG00000007783.11	Cpt1c	chr7	protein_coding	carnitine palmitoyltransferase 1c
chr7	44616331	44616482	-	44616328	44616482	A3SS	0.5	50	50	ENSMUST00000211901.2	ENSMUSG00000007783.11	Cpt1c	chr7	protein_coding	carnitine palmitoyltransferase 1c
chr7	44622573	44624019	-	44622573	44623151	A5SS&ES	0.5	50	50	ENSMUST00000212836.2	ENSMUSG00000007783.11	Cpt1c	chr7	protein_coding	carnitine palmitoyltransferase 1c
chr7	44623304	44624019	-	44623304	44624021	A5SS	0.5	50	50	ENSMUST00000212836.2	ENSMUSG00000007783.11	Cpt1c	chr7	protein_coding	carnitine palmitoyltransferase 1c
chr7	44622573	44624019	-	44622573;44623304	44623151;44624019	ES	0.5	50	50	ENSMUST00000063761.8	ENSMUSG00000007783.11	Cpt1c	chr7	protein_coding	carnitine palmitoyltransferase 1c
chr7	44628394	44631011	-	44628394;44628949	44628807;44631011	ES	0.5	50	50	ENSMUST00000207370.2	ENSMUSG00000109324.3	Prmt1	chr7	protein_coding	protein arginine N-methyltransferase 1
chr7	44633011;44633557	44633159;44635707	-	44633011	44635707	cassetteExon	0.5	100	100	ENSMUST00000207370.2	ENSMUSG00000109324.3	Prmt1	chr7	protein_coding	protein arginine N-methyltransferase 1
chr7	44633011;44633557	44633195;44635707	-	44633011	44635707	cassetteExon	0.5	100	100	ENSMUST00000207370.2	ENSMUSG00000109324.3	Prmt1	chr7	protein_coding	protein arginine N-methyltransferase 1
chr7	44633011;44633557	44633504;44635707	-	44633011	44635707	cassetteExon	0.5	100	100	ENSMUST00000207370.2	ENSMUSG00000109324.3	Prmt1	chr7	protein_coding	protein arginine N-methyltransferase 1
chr7	44627677	44635707	-	44633011	44635707	A3SS&ES	0.2	50	50	ENSMUST00000207370.2	ENSMUSG00000109324.3	Prmt1	chr7	protein_coding	protein arginine N-methyltransferase 1
chr7	44628172	44628307	-	44628214	44628307	A3SS	0.5	50	50	ENSMUST00000207370.2	ENSMUSG00000109324.3	Prmt1	chr7	protein_coding	protein arginine N-methyltransferase 1
chr7	44631314	44635707	-	44633011	44635707	A3SS&ES	0.2	50	50	ENSMUST00000207370.2	ENSMUSG00000109324.3	Prmt1	chr7	protein_coding	protein arginine N-methyltransferase 1
chr7	44631074	44631171	-	44631074	44631162	A5SS	0.5	50	50	ENSMUST00000207370.2	ENSMUSG00000109324.3	Prmt1	chr7	protein_coding	protein arginine N-methyltransferase 1
chr7	44628394	44631011	-	44628949	44631011	A3SS&ES	0.5	50	50	ENSMUST00000207659.2	ENSMUSG00000109324.3	Prmt1	chr7	protein_coding	protein arginine N-methyltransferase 1
chr7	44633011;44633299	44633159;44633504	-	44633011	44633504	cassetteExon	0.5	100	100	ENSMUST00000107843.11	ENSMUSG00000109324.3	Prmt1	chr7	protein_coding	protein arginine N-methyltransferase 1
chr7	44633011;44633299	44633195;44633504	-	44633011	44633504	cassetteExon	0.5	100	100	ENSMUST00000107843.11	ENSMUSG00000109324.3	Prmt1	chr7	protein_coding	protein arginine N-methyltransferase 1
chr7	44627677	44635707	-	44633557	44635707	A3SS&ES	0.2	50	50	ENSMUST00000107843.11	ENSMUSG00000109324.3	Prmt1	chr7	protein_coding	protein arginine N-methyltransferase 1
chr7	44631314	44635707	-	44633557	44635707	A3SS&ES	0.2	50	50	ENSMUST00000107843.11	ENSMUSG00000109324.3	Prmt1	chr7	protein_coding	protein arginine N-methyltransferase 1
chr7	44628949	44635707	-	44627677	44635707	A3SS	0.2	50	50	ENSMUST00000208829.2	ENSMUSG00000109324.3	Prmt1	chr7	protein_coding	protein arginine N-methyltransferase 1
chr7	44631314	44635707	-	44627677	44635707	A3SS	0.2	50	50	ENSMUST00000208829.2	ENSMUSG00000109324.3	Prmt1	chr7	protein_coding	protein arginine N-methyltransferase 1
chr7	44628394;44631314	44631011;44635707	-	44628394;44628949	44628807;44635707	MXE	0.5	100	100	ENSMUST00000209124.2	ENSMUSG00000109324.3	Prmt1	chr7	protein_coding	protein arginine N-methyltransferase 1
chr7	44628949;44631314	44631011;44635707	-	44628949	44635707	cassetteExon	0.5	100	100	ENSMUST00000209124.2	ENSMUSG00000109324.3	Prmt1	chr7	protein_coding	protein arginine N-methyltransferase 1
chr7	44633011	44635707	-	44628949	44635707	A3SS	0.2	50	50	ENSMUST00000209124.2	ENSMUSG00000109324.3	Prmt1	chr7	protein_coding	protein arginine N-methyltransferase 1
chr7	44633557	44635707	-	44628949	44635707	A3SS	0.2	50	50	ENSMUST00000209124.2	ENSMUSG00000109324.3	Prmt1	chr7	protein_coding	protein arginine N-methyltransferase 1
chr7	44628394	44631011	-	44628394	44628807	5pMXE	0.5	50	50	ENSMUST00000208778.2	ENSMUSG00000109324.3	Prmt1	chr7	protein_coding	protein arginine N-methyltransferase 1
chr7	44627701;44628394	44628099;44628807	-	44627701	44628807	cassetteExon	0.5	100	100	ENSMUST00000208312.2	ENSMUSG00000109324.3	Prmt1	chr7	protein_coding	protein arginine N-methyltransferase 1
chr7	44627701;44628394	44628099;44631011	-	44627701;44628949	44628807;44631011	MXE	0.5	100	100	ENSMUST00000208312.2	ENSMUSG00000109324.3	Prmt1	chr7	protein_coding	protein arginine N-methyltransferase 1
chr7	44633011	44633195	-	44633011	44633159	A5SS	0.25	50	50	ENSMUST00000207522.2	ENSMUSG00000109324.3	Prmt1	chr7	protein_coding	protein arginine N-methyltransferase 1
chr7	44633011	44633504	-	44633011	44633195	A5SS	0.25	50	50	ENSMUST00000207702.2	ENSMUSG00000109324.3	Prmt1	chr7	protein_coding	protein arginine N-methyltransferase 1
chr7	44636794	44640373	+	44636794	44640801	A3SS	0.5	50	50	ENSMUST00000141011.2	ENSMUSG00000087138.2	Gm15545	chr7	lncRNA	predicted gene 15545
chr7	44636794	44640373	+	44636794	44643407	A3SS	0.25	50	50	ENSMUST00000150613.2	ENSMUSG00000087138.2	Gm15545	chr7	lncRNA	predicted gene 15545
chr7	44636794	44640801	+	44636794	44643407	A3SS	0.25	50	50	ENSMUST00000150613.2	ENSMUSG00000087138.2	Gm15545	chr7	lncRNA	predicted gene 15545
chr7	44636794	44641447	+	44636794	44643407	A3SS	0.25	50	50	ENSMUST00000150613.2	ENSMUSG00000087138.2	Gm15545	chr7	lncRNA	predicted gene 15545
chr7	44636794	44641447	+	44636794	44640373	3pMXE	0.25	50	50	ENSMUST00000123517.2	ENSMUSG00000087138.2	Gm15545	chr7	lncRNA	predicted gene 15545
chr7	44636794	44640801	+	44636794	44641447	A3SS	0.25	50	50	ENSMUST00000152595.2	ENSMUSG00000087138.2	Gm15545	chr7	lncRNA	predicted gene 15545
chr7	44642455	44643787	-	44642455;44643695	44643604;44643787	ES	0.5	50	50	ENSMUST00000003290.12	ENSMUSG00000003190.13	Bcl2l12	chr7	protein_coding	BCL2-like 12 (proline rich)
chr7	44643900	44645968	-	44643873	44645968	A3SS	0.5	50	50	ENSMUST00000003290.12	ENSMUSG00000003190.13	Bcl2l12	chr7	protein_coding	BCL2-like 12 (proline rich)
chr7	44642455	44643235	-	44642455	44643604	A5SS	0.33	50	50	ENSMUST00000003290.12	ENSMUSG00000003190.13	Bcl2l12	chr7	protein_coding	BCL2-like 12 (proline rich)
chr7	44642455	44643787	-	44642455;44643695	44643235;44643787	ES	0.5	50	50	ENSMUST00000208128.2	ENSMUSG00000003190.13	Bcl2l12	chr7	protein_coding	BCL2-like 12 (proline rich)
chr7	44642455	44643787	-	44643695	44643787	3pMXE	0.5	50	50	ENSMUST00000207443.2	ENSMUSG00000003190.13	Bcl2l12	chr7	protein_coding	BCL2-like 12 (proline rich)
chr7	44649970	44651097	+	44649970;44650446	44650069;44651097	ES	0.33	50	50	ENSMUST00000003284.16	ENSMUSG00000003184.16	Irf3	chr7	protein_coding	interferon regulatory factor 3
chr7	44650446	44651588	+	44650446;44651212	44651097;44651588	ES	0.5	50	50	ENSMUST00000003284.16	ENSMUSG00000003184.16	Irf3	chr7	protein_coding	interferon regulatory factor 3
chr7	44647490	44648129	+	44647332	44648129	A5SS	0.5	50	50	ENSMUST00000003284.16	ENSMUSG00000003184.16	Irf3	chr7	protein_coding	interferon regulatory factor 3
chr7	44650240	44651097	+	44650446	44651097	A5SS	0.33	50	50	ENSMUST00000003284.16	ENSMUSG00000003184.16	Irf3	chr7	protein_coding	interferon regulatory factor 3
chr7	44649970	44651097	+	44650446	44651097	A5SS	0.33	50	50	ENSMUST00000207476.2	ENSMUSG00000003184.16	Irf3	chr7	protein_coding	interferon regulatory factor 3
chr7	44649970;44650240	44650069;44651097	+	44649970	44651097	cassetteExon	0.5	100	100	ENSMUST00000207128.2	ENSMUSG00000003184.16	Irf3	chr7	protein_coding	interferon regulatory factor 3
chr7	44649970;44650446	44650069;44651588	+	44649970;44651212	44651097;44651588	MXE	0.5	100	100	ENSMUST00000207128.2	ENSMUSG00000003184.16	Irf3	chr7	protein_coding	interferon regulatory factor 3
chr7	44649970	44651097	+	44649970	44650069	3pMXE	0.5	50	50	ENSMUST00000208143.2	ENSMUSG00000003184.16	Irf3	chr7	protein_coding	interferon regulatory factor 3
chr7	44649970	44651097	+	44650240	44651097	5pMXE	0.33	50	50	ENSMUST00000208958.2	ENSMUSG00000003184.16	Irf3	chr7	protein_coding	interferon regulatory factor 3
chr7	44650446	44651588	+	44651212	44651588	A5SS&ES	0.5	50	50	ENSMUST00000208958.2	ENSMUSG00000003184.16	Irf3	chr7	protein_coding	interferon regulatory factor 3
chr7	44663017	44665504	-	44663017	44663629	5pMXE	0.5	50	50	ENSMUST00000211735.2	ENSMUSG00000038406.18	Scaf1	chr7	protein_coding	SR-related CTD-associated factor 1
chr7	44660422	44661547	-	44658396	44661547	A3SS	0.5	50	50	ENSMUST00000211735.2	ENSMUSG00000038406.18	Scaf1	chr7	protein_coding	SR-related CTD-associated factor 1
chr7	44663017;44663759	44663629;44665504	-	44663017	44665504	cassetteExon	0.5	100	100	ENSMUST00000085383.11	ENSMUSG00000038406.18	Scaf1	chr7	protein_coding	SR-related CTD-associated factor 1
chr7	44663759	44664262	-	44663759	44665504	A5SS	0.33	50	50	ENSMUST00000210056.2	ENSMUSG00000038406.18	Scaf1	chr7	protein_coding	SR-related CTD-associated factor 1
chr7	44663759	44664889	-	44663759	44665504	A5SS	0.33	50	50	ENSMUST00000210056.2	ENSMUSG00000038406.18	Scaf1	chr7	protein_coding	SR-related CTD-associated factor 1
chr7	44663759	44664262	-	44663759	44664889	A5SS	0.33	50	50	ENSMUST00000211680.2	ENSMUSG00000038406.18	Scaf1	chr7	protein_coding	SR-related CTD-associated factor 1
chr7	44669829	44670511	+	44669829;44670022	44669914;44670511	ES	0.5	50	50	ENSMUST00000044111.10	ENSMUSG00000038387.10	Rras	chr7	protein_coding	related RAS viral (r-ras) oncogene
chr7	44669019	44669524	+	44667592	44669524	A5SS	0.5	50	50	ENSMUST00000044111.10	ENSMUSG00000038387.10	Rras	chr7	protein_coding	related RAS viral (r-ras) oncogene
chr7	44704071	44709396	-	44704071;44706308	44706167;44709396	ES	0.5	50	50	ENSMUST00000210690.2	ENSMUSG00000007837.12	Prrg2	chr7	protein_coding	proline-rich Gla (G-carboxyglutamic acid) polypeptide 2
chr7	44709435	44710165	-	44709435;44709810	44709629;44710165	ES	0.25	50	50	ENSMUST00000210690.2	ENSMUSG00000007837.12	Prrg2	chr7	protein_coding	proline-rich Gla (G-carboxyglutamic acid) polypeptide 2
chr7	44710316	44711802	-	44710316;44711075	44711012;44711802	ES	0.5	50	50	ENSMUST00000210690.2	ENSMUSG00000007837.12	Prrg2	chr7	protein_coding	proline-rich Gla (G-carboxyglutamic acid) polypeptide 2
chr7	44709783	44710165	-	44709810	44710165	A3SS	0.25	50	50	ENSMUST00000210690.2	ENSMUSG00000007837.12	Prrg2	chr7	protein_coding	proline-rich Gla (G-carboxyglutamic acid) polypeptide 2
chr7	44709839	44710165	-	44709810	44710165	A3SS	0.25	50	50	ENSMUST00000210690.2	ENSMUSG00000007837.12	Prrg2	chr7	protein_coding	proline-rich Gla (G-carboxyglutamic acid) polypeptide 2
chr7	44710316	44711802	-	44710316	44711012	5pMXE	0.5	50	50	ENSMUST00000007981.9	ENSMUSG00000007837.12	Prrg2	chr7	protein_coding	proline-rich Gla (G-carboxyglutamic acid) polypeptide 2
chr7	44709435;44709783	44709629;44710165	-	44709435	44710165	cassetteExon	0.5	100	100	ENSMUST00000209920.2	ENSMUSG00000007837.12	Prrg2	chr7	protein_coding	proline-rich Gla (G-carboxyglutamic acid) polypeptide 2
chr7	44709435;44709839	44709629;44710165	-	44709435	44710165	cassetteExon	0.5	100	100	ENSMUST00000209920.2	ENSMUSG00000007837.12	Prrg2	chr7	protein_coding	proline-rich Gla (G-carboxyglutamic acid) polypeptide 2
chr7	44709839	44710165	-	44709783	44710165	A3SS	0.25	50	50	ENSMUST00000210500.2	ENSMUSG00000007837.12	Prrg2	chr7	protein_coding	proline-rich Gla (G-carboxyglutamic acid) polypeptide 2
chr7	44704071	44709396	-	44706308	44709396	3pMXE	0.5	50	50	ENSMUST00000209219.2	ENSMUSG00000007837.12	Prrg2	chr7	protein_coding	proline-rich Gla (G-carboxyglutamic acid) polypeptide 2
chr7	44725852	44726245	+	44725852;44726163	44726051;44726245	ES	0.33	50	50	ENSMUST00000107829.9	ENSMUSG00000003421.14	Nosip	chr7	protein_coding	nitric oxide synthase interacting protein
chr7	44725852	44725976	+	44725852	44726051	A3SS	0.33	50	50	ENSMUST00000107829.9	ENSMUSG00000003421.14	Nosip	chr7	protein_coding	nitric oxide synthase interacting protein
chr7	44724105	44725493	+	44724111	44725493	A5SS	0.33	50	50	ENSMUST00000107829.9	ENSMUSG00000003421.14	Nosip	chr7	protein_coding	nitric oxide synthase interacting protein
chr7	44725265	44725493	+	44724111	44725493	A5SS	0.33	50	50	ENSMUST00000107829.9	ENSMUSG00000003421.14	Nosip	chr7	protein_coding	nitric oxide synthase interacting protein
chr7	44725852	44726245	+	44725852;44726163	44725976;44726245	ES	0.33	50	50	ENSMUST00000003513.11	ENSMUSG00000003421.14	Nosip	chr7	protein_coding	nitric oxide synthase interacting protein
chr7	44725852	44726245	+	44725852	44725976	3pMXE	0.33	50	50	ENSMUST00000211465.2	ENSMUSG00000003421.14	Nosip	chr7	protein_coding	nitric oxide synthase interacting protein
chr7	44725265	44725493	+	44724105	44725493	A5SS	0.33	50	50	ENSMUST00000211465.2	ENSMUSG00000003421.14	Nosip	chr7	protein_coding	nitric oxide synthase interacting protein
chr7	44725652;44725852	44725734;44726245	+	44725652	44726245	cassetteExon	0.5	100	100	ENSMUST00000210520.2	ENSMUSG00000003421.14	Nosip	chr7	protein_coding	nitric oxide synthase interacting protein
chr7	44725652;44726163	44725734;44726245	+	44725652	44726245	cassetteExon	0.5	100	100	ENSMUST00000210520.2	ENSMUSG00000003421.14	Nosip	chr7	protein_coding	nitric oxide synthase interacting protein
chr7	44725652	44726245	+	44726163	44726245	5pMXE	0.33	50	50	ENSMUST00000210668.2	ENSMUSG00000003421.14	Nosip	chr7	protein_coding	nitric oxide synthase interacting protein
chr7	44725852	44726245	+	44726163	44726245	A5SS	0.33	50	50	ENSMUST00000210668.2	ENSMUSG00000003421.14	Nosip	chr7	protein_coding	nitric oxide synthase interacting protein
chr7	44732787	44734328	-	44732787;44733189	44732990;44734328	ES	0.5	50	50	ENSMUST00000211352.2	ENSMUSG00000019539.12	Rcn3	chr7	protein_coding	reticulocalbin 3, EF-hand calcium binding domain
chr7	44732787	44733093	-	44732787	44732990	A5SS	0.33	50	50	ENSMUST00000211352.2	ENSMUSG00000019539.12	Rcn3	chr7	protein_coding	reticulocalbin 3, EF-hand calcium binding domain
chr7	44741112	44741520	-	44741112	44741529	A5SS	0.25	50	50	ENSMUST00000211352.2	ENSMUSG00000019539.12	Rcn3	chr7	protein_coding	reticulocalbin 3, EF-hand calcium binding domain
chr7	44741112	44741551	-	44741112	44741529	A5SS	0.25	50	50	ENSMUST00000211352.2	ENSMUSG00000019539.12	Rcn3	chr7	protein_coding	reticulocalbin 3, EF-hand calcium binding domain
chr7	44741112	44741584	-	44741112	44741529	A5SS	0.25	50	50	ENSMUST00000211352.2	ENSMUSG00000019539.12	Rcn3	chr7	protein_coding	reticulocalbin 3, EF-hand calcium binding domain
chr7	44741112	44741551	-	44741112	44741520	A5SS	0.25	50	50	ENSMUST00000019683.11	ENSMUSG00000019539.12	Rcn3	chr7	protein_coding	reticulocalbin 3, EF-hand calcium binding domain
chr7	44741112	44741584	-	44741112	44741520	A5SS	0.25	50	50	ENSMUST00000019683.11	ENSMUSG00000019539.12	Rcn3	chr7	protein_coding	reticulocalbin 3, EF-hand calcium binding domain
chr7	44732787	44734328	-	44732787;44733189	44733093;44734328	ES	0.5	50	50	ENSMUST00000209761.2	ENSMUSG00000019539.12	Rcn3	chr7	protein_coding	reticulocalbin 3, EF-hand calcium binding domain
chr7	44732787	44734328	-	44732787	44732990	5pMXE	0.33	50	50	ENSMUST00000210615.2	ENSMUSG00000019539.12	Rcn3	chr7	protein_coding	reticulocalbin 3, EF-hand calcium binding domain
chr7	44732787	44734328	-	44733189	44734328	3pMXE	0.5	50	50	ENSMUST00000210734.2	ENSMUSG00000019539.12	Rcn3	chr7	protein_coding	reticulocalbin 3, EF-hand calcium binding domain
chr7	44741112	44741584	-	44741112	44741551	A5SS	0.25	50	50	ENSMUST00000210734.2	ENSMUSG00000019539.12	Rcn3	chr7	protein_coding	reticulocalbin 3, EF-hand calcium binding domain
chr7	44752017	44752427	-	44752095	44752427	A3SS	0.5	50	50	ENSMUST00000003512.9	ENSMUSG00000003420.9	Fcgrt	chr7	protein_coding	Fc fragment of IgG receptor and transporter
chr7	44751609	44751826	-	44751609	44751838	A5SS	0.5	50	50	ENSMUST00000003512.9	ENSMUSG00000003420.9	Fcgrt	chr7	protein_coding	Fc fragment of IgG receptor and transporter
chr7	44771972	44772253	-	44771982	44772253	A3SS	0.5	50	50	ENSMUST00000003521.10	ENSMUSG00000003429.12	Rps11	chr7	protein_coding	ribosomal protein S11
chr7	44772382	44772620	-	44772382	44772587	A5SS	0.5	50	50	ENSMUST00000003521.10	ENSMUSG00000003429.12	Rps11	chr7	protein_coding	ribosomal protein S11
chr7	44775961	44776415	-	44775961;44776218	44776133;44776415	ES	0.33	50	50	ENSMUST00000150350.9	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44776516	44776920	-	44776516;44776698	44776633;44776920	ES	0.5	50	50	ENSMUST00000150350.9	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44776992	44781652	-	44776992	44778124	5pMXE	0.25	50	50	ENSMUST00000150350.9	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44775441	44776133	-	44775961	44776133	A3SS&ES	0.5	50	50	ENSMUST00000150350.9	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44775677	44775902	-	44775661	44775902	A3SS	0.5	50	50	ENSMUST00000150350.9	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44776251	44776415	-	44776218	44776415	A3SS	0.33	50	50	ENSMUST00000150350.9	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44776511	44776633	-	44776516	44776633	A3SS	0.33	50	50	ENSMUST00000150350.9	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44775661	44776166	-	44775661	44775902	A5SS&ES	0.5	50	50	ENSMUST00000150350.9	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44776218	44776382	-	44776218	44776415	A5SS	0.5	50	50	ENSMUST00000150350.9	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44776992	44777252	-	44776992	44778124	A5SS	0.25	50	50	ENSMUST00000150350.9	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44776992	44777966	-	44776992	44778124	A5SS	0.25	50	50	ENSMUST00000150350.9	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44776516	44776920	-	44776698	44776920	A3SS&ES	0.5	50	50	ENSMUST00000209812.2	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44775961	44776415	-	44776218	44776415	A3SS&ES	0.33	50	50	ENSMUST00000211037.2	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44775961	44776633	-	44776516	44776633	A3SS&ES	0.33	50	50	ENSMUST00000211037.2	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44775961	44776633	-	44775961	44776133	A5SS&ES	0.33	50	50	ENSMUST00000210073.2	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44775961	44776415	-	44775961	44776133	5pMXE	0.33	50	50	ENSMUST00000210792.2	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44775961;44776698	44776633;44776920	-	44775961;44776516	44776133;44776920	MXE	0.5	100	100	ENSMUST00000209927.2	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44776992	44781652	-	44776992	44777966	5pMXE	0.25	50	50	ENSMUST00000209711.2	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44775661;44776511	44776166;44776633	-	44775661;44775961	44775902;44776633	MXE	0.5	100	100	ENSMUST00000209711.2	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44775961;44776511	44776133;44776633	-	44775961	44776633	cassetteExon	0.5	100	100	ENSMUST00000209711.2	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44775961;44776511	44776415;44776633	-	44775961	44776633	cassetteExon	0.5	100	100	ENSMUST00000209711.2	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44775661;44776516	44776166;44776633	-	44775661;44775961	44775902;44776633	MXE	0.5	100	100	ENSMUST00000209711.2	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44775961;44776516	44776133;44776633	-	44775961	44776633	cassetteExon	0.5	100	100	ENSMUST00000209711.2	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44775961;44776516	44776415;44776633	-	44775961	44776633	cassetteExon	0.5	100	100	ENSMUST00000209711.2	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44775661;44776516	44776166;44776920	-	44775661;44776698	44775902;44776920	MXE	0.5	100	100	ENSMUST00000209711.2	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44775961;44776516	44776415;44776920	-	44775961;44776698	44776633;44776920	MXE	0.5	100	100	ENSMUST00000209711.2	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44776992	44777252	-	44776992	44777966	A5SS	0.25	50	50	ENSMUST00000209711.2	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44775661;44776218	44776166;44776415	-	44775661;44775961	44775902;44776415	MXE	0.5	100	100	ENSMUST00000209212.2	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44775661;44776251	44776166;44776415	-	44775661;44775961	44775902;44776415	MXE	0.5	100	100	ENSMUST00000209212.2	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44775961;44776251	44776133;44776415	-	44775961	44776415	cassetteExon	0.5	100	100	ENSMUST00000209212.2	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44776992	44781652	-	44776992	44777252	5pMXE	0.25	50	50	ENSMUST00000209965.2	ENSMUSG00000074129.15	Rpl13a	chr7	protein_coding	ribosomal protein L13A
chr7	44781836;44782925	44782847;44783306	-	44781836	44783306	cassetteExon	0.5	100	100	ENSMUST00000209467.2	ENSMUSG00000089989.11	Gm45713	chr7	protein_coding	predicted gene 45713
chr7	44779418	44781652	-	44776992	44781652	A3SS	0.25	50	50	ENSMUST00000209467.2	ENSMUSG00000089989.11	Gm45713	chr7	protein_coding	predicted gene 45713
chr7	44780855	44781652	-	44776992	44781652	A3SS	0.25	50	50	ENSMUST00000209467.2	ENSMUSG00000089989.11	Gm45713	chr7	protein_coding	predicted gene 45713
chr7	44781561	44781652	-	44776992	44781652	A3SS	0.25	50	50	ENSMUST00000209467.2	ENSMUSG00000089989.11	Gm45713	chr7	protein_coding	predicted gene 45713
chr7	44781836	44783322	-	44781836	44783306	A5SS	0.25	50	50	ENSMUST00000209467.2	ENSMUSG00000089989.11	Gm45713	chr7	protein_coding	predicted gene 45713
chr7	44779418;44780855	44780826;44781652	-	44779418	44781652	cassetteExon	0.5	100	100	ENSMUST00000210832.2	ENSMUSG00000110206.2	Flt3l	chr7	protein_coding	FMS-like tyrosine kinase 3 ligand
chr7	44779418;44781561	44781493;44781652	-	44779418	44781652	cassetteExon	0.5	100	100	ENSMUST00000210832.2	ENSMUSG00000110206.2	Flt3l	chr7	protein_coding	FMS-like tyrosine kinase 3 ligand
chr7	44785201	44785442	-	44781836	44785442	A3SS	0.5	50	50	ENSMUST00000210832.2	ENSMUSG00000110206.2	Flt3l	chr7	protein_coding	FMS-like tyrosine kinase 3 ligand
chr7	44781836	44782847	-	44781836	44785442	A5SS	0.25	50	50	ENSMUST00000210832.2	ENSMUSG00000110206.2	Flt3l	chr7	protein_coding	FMS-like tyrosine kinase 3 ligand
chr7	44781836	44783306	-	44781836	44785442	A5SS	0.25	50	50	ENSMUST00000210832.2	ENSMUSG00000110206.2	Flt3l	chr7	protein_coding	FMS-like tyrosine kinase 3 ligand
chr7	44781836	44783322	-	44781836	44785442	A5SS	0.25	50	50	ENSMUST00000210832.2	ENSMUSG00000110206.2	Flt3l	chr7	protein_coding	FMS-like tyrosine kinase 3 ligand
chr7	44779418	44781493	-	44779418	44780826	5pMXE	0.33	50	50	ENSMUST00000210175.2	ENSMUSG00000110206.2	Flt3l	chr7	protein_coding	FMS-like tyrosine kinase 3 ligand
chr7	44779418	44781652	-	44779418	44780826	5pMXE	0.33	50	50	ENSMUST00000210175.2	ENSMUSG00000110206.2	Flt3l	chr7	protein_coding	FMS-like tyrosine kinase 3 ligand
chr7	44779418;44780855	44780826;44781493	-	44779418	44781493	cassetteExon	0.5	100	100	ENSMUST00000211503.2	ENSMUSG00000110206.2	Flt3l	chr7	protein_coding	FMS-like tyrosine kinase 3 ligand
chr7	44779418;44780855	44780826;44781652	-	44779418;44781561	44781493;44781652	MXE	0.5	100	100	ENSMUST00000211503.2	ENSMUSG00000110206.2	Flt3l	chr7	protein_coding	FMS-like tyrosine kinase 3 ligand
chr7	44779418;44780990	44780826;44781493	-	44779418	44781493	cassetteExon	0.5	100	100	ENSMUST00000211503.2	ENSMUSG00000110206.2	Flt3l	chr7	protein_coding	FMS-like tyrosine kinase 3 ligand
chr7	44779418;44781164	44780826;44781493	-	44779418	44781493	cassetteExon	0.5	100	100	ENSMUST00000211503.2	ENSMUSG00000110206.2	Flt3l	chr7	protein_coding	FMS-like tyrosine kinase 3 ligand
chr7	44779418	44781493	-	44780990	44781493	3pMXE	0.25	50	50	ENSMUST00000211429.2	ENSMUSG00000110206.2	Flt3l	chr7	protein_coding	FMS-like tyrosine kinase 3 ligand
chr7	44780990;44781164	44781091;44781493	-	44780990	44781493	cassetteExon	0.5	100	100	ENSMUST00000211429.2	ENSMUSG00000110206.2	Flt3l	chr7	protein_coding	FMS-like tyrosine kinase 3 ligand
chr7	44780855	44781493	-	44780990	44781493	A3SS	0.25	50	50	ENSMUST00000211429.2	ENSMUSG00000110206.2	Flt3l	chr7	protein_coding	FMS-like tyrosine kinase 3 ligand
chr7	44780855	44781652	-	44781561	44781652	A3SS&ES	0.5	50	50	ENSMUST00000211429.2	ENSMUSG00000110206.2	Flt3l	chr7	protein_coding	FMS-like tyrosine kinase 3 ligand
chr7	44779418	44781652	-	44780855	44781652	3pMXE	0.25	50	50	ENSMUST00000210818.2	ENSMUSG00000110206.2	Flt3l	chr7	protein_coding	FMS-like tyrosine kinase 3 ligand
chr7	44780855;44781561	44781493;44781652	-	44780855	44781652	cassetteExon	0.5	100	100	ENSMUST00000210818.2	ENSMUSG00000110206.2	Flt3l	chr7	protein_coding	FMS-like tyrosine kinase 3 ligand
chr7	44781836;44782925	44782847;44783322	-	44781836	44783322	cassetteExon	0.5	100	100	ENSMUST00000210818.2	ENSMUSG00000110206.2	Flt3l	chr7	protein_coding	FMS-like tyrosine kinase 3 ligand
chr7	44779418	44781493	-	44780855	44781493	3pMXE	0.25	50	50	ENSMUST00000211542.2	ENSMUSG00000110206.2	Flt3l	chr7	protein_coding	FMS-like tyrosine kinase 3 ligand
chr7	44781164	44781493	-	44780855	44781493	A3SS	0.25	50	50	ENSMUST00000211542.2	ENSMUSG00000110206.2	Flt3l	chr7	protein_coding	FMS-like tyrosine kinase 3 ligand
chr7	44779418	44781652	-	44781561	44781652	3pMXE	0.25	50	50	ENSMUST00000210083.2	ENSMUSG00000110206.2	Flt3l	chr7	protein_coding	FMS-like tyrosine kinase 3 ligand
chr7	44781836	44783306	-	44781836	44782847	A5SS&ES	0.25	50	50	ENSMUST00000210197.2	ENSMUSG00000110206.2	Flt3l	chr7	protein_coding	FMS-like tyrosine kinase 3 ligand
chr7	44782925	44783306	-	44782925	44783322	A5SS	0.5	50	50	ENSMUST00000210197.2	ENSMUSG00000110206.2	Flt3l	chr7	protein_coding	FMS-like tyrosine kinase 3 ligand
chr7	44781836	44783306	-	44782925	44783306	3pMXE	0.5	50	50	ENSMUST00000209612.2	ENSMUSG00000110206.2	Flt3l	chr7	protein_coding	FMS-like tyrosine kinase 3 ligand
chr7	44798164	44803816	-	44798164;44799190	44798725;44803816	ES	0.33	50	50	ENSMUST00000209581.2	ENSMUSG00000007833.16	Aldh16a1	chr7	protein_coding	aldehyde dehydrogenase 16 family, member A1
chr7	44796945	44797149	-	44797004	44797149	A3SS	0.5	50	50	ENSMUST00000209581.2	ENSMUSG00000007833.16	Aldh16a1	chr7	protein_coding	aldehyde dehydrogenase 16 family, member A1
chr7	44798164	44799088	-	44798164	44798725	A5SS	0.33	50	50	ENSMUST00000209581.2	ENSMUSG00000007833.16	Aldh16a1	chr7	protein_coding	aldehyde dehydrogenase 16 family, member A1
chr7	44798164	44803816	-	44798164;44799190	44799088;44803816	ES	0.33	50	50	ENSMUST00000209963.2	ENSMUSG00000007833.16	Aldh16a1	chr7	protein_coding	aldehyde dehydrogenase 16 family, member A1
chr7	44792722	44793937	-	44791526	44793937	A3SS	0.5	50	50	ENSMUST00000211169.2	ENSMUSG00000007833.16	Aldh16a1	chr7	protein_coding	aldehyde dehydrogenase 16 family, member A1
chr7	44791526	44792204	-	44791526	44793937	A5SS	0.5	50	50	ENSMUST00000211169.2	ENSMUSG00000007833.16	Aldh16a1	chr7	protein_coding	aldehyde dehydrogenase 16 family, member A1
chr7	44798164	44803816	-	44797226	44803816	A3SS	0.33	50	50	ENSMUST00000210125.2	ENSMUSG00000007833.16	Aldh16a1	chr7	protein_coding	aldehyde dehydrogenase 16 family, member A1
chr7	44799190	44803816	-	44797226	44803816	A3SS	0.33	50	50	ENSMUST00000210125.2	ENSMUSG00000007833.16	Aldh16a1	chr7	protein_coding	aldehyde dehydrogenase 16 family, member A1
chr7	44797226	44797308	-	44797226	44803816	A5SS	0.5	50	50	ENSMUST00000210125.2	ENSMUSG00000007833.16	Aldh16a1	chr7	protein_coding	aldehyde dehydrogenase 16 family, member A1
chr7	44798164	44803816	-	44799190	44803816	3pMXE	0.33	50	50	ENSMUST00000209889.2	ENSMUSG00000007833.16	Aldh16a1	chr7	protein_coding	aldehyde dehydrogenase 16 family, member A1
chr7	44803844;44804329	44804235;44805730	+	44803844	44805730	cassetteExon	0.5	100	100	ENSMUST00000210139.2	ENSMUSG00000003423.16	Pih1d1	chr7	protein_coding	PIH1 domain containing 1
chr7	44803844	44805717	+	44803844	44805730	A3SS	0.33	50	50	ENSMUST00000210139.2	ENSMUSG00000003423.16	Pih1d1	chr7	protein_coding	PIH1 domain containing 1
chr7	44803964	44805730	+	44803844	44805730	A5SS	0.2	50	50	ENSMUST00000210139.2	ENSMUSG00000003423.16	Pih1d1	chr7	protein_coding	PIH1 domain containing 1
chr7	44805269	44805730	+	44803844	44805730	A5SS	0.2	50	50	ENSMUST00000210139.2	ENSMUSG00000003423.16	Pih1d1	chr7	protein_coding	PIH1 domain containing 1
chr7	44805479	44805730	+	44803844	44805730	A5SS	0.2	50	50	ENSMUST00000210139.2	ENSMUSG00000003423.16	Pih1d1	chr7	protein_coding	PIH1 domain containing 1
chr7	44803844	44805717	+	44803844	44804235	A3SS&ES	0.33	50	50	ENSMUST00000211709.2	ENSMUSG00000003423.16	Pih1d1	chr7	protein_coding	PIH1 domain containing 1
chr7	44803964	44805730	+	44804329	44805730	A5SS&ES	0.2	50	50	ENSMUST00000211709.2	ENSMUSG00000003423.16	Pih1d1	chr7	protein_coding	PIH1 domain containing 1
chr7	44805269	44805730	+	44804329	44805730	A5SS	0.2	50	50	ENSMUST00000211709.2	ENSMUSG00000003423.16	Pih1d1	chr7	protein_coding	PIH1 domain containing 1
chr7	44805479	44805730	+	44804329	44805730	A5SS	0.2	50	50	ENSMUST00000211709.2	ENSMUSG00000003423.16	Pih1d1	chr7	protein_coding	PIH1 domain containing 1
chr7	44805269	44805730	+	44803964	44805730	A5SS	0.2	50	50	ENSMUST00000085375.13	ENSMUSG00000003423.16	Pih1d1	chr7	protein_coding	PIH1 domain containing 1
chr7	44805479	44805730	+	44803964	44805730	A5SS	0.2	50	50	ENSMUST00000085375.13	ENSMUSG00000003423.16	Pih1d1	chr7	protein_coding	PIH1 domain containing 1
chr7	44805479	44805730	+	44805269	44805730	A5SS	0.33	50	50	ENSMUST00000209954.2	ENSMUSG00000003423.16	Pih1d1	chr7	protein_coding	PIH1 domain containing 1
chr7	44818391;44819009	44818935;44819241	+	44818391	44819241	cassetteExon	0.5	100	100	ENSMUST00000085374.7	ENSMUSG00000070570.6	Slc17a7	chr7	protein_coding	solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7
chr7	44828271	44828913	-	44828351	44828913	A3SS	0.5	50	50	ENSMUST00000179443.3	ENSMUSG00000095276.3	Gfy	chr7	protein_coding	golgi-associated olfactory signaling regulator
chr7	44838341	44838765	-	44833677	44838765	A3SS	0.5	50	50	ENSMUST00000211277.2	ENSMUSG00000038292.15	Kash5	chr7	protein_coding	KASH domain containing 5
chr7	44833677	44834702	-	44833677	44838765	A5SS	0.5	50	50	ENSMUST00000211277.2	ENSMUSG00000038292.15	Kash5	chr7	protein_coding	KASH domain containing 5
chr7	44859895	44861180	-	44859895;44860994	44860825;44861180	ES	0.5	50	50	ENSMUST00000033057.9	ENSMUSG00000030792.9	Dkkl1	chr7	protein_coding	dickkopf-like 1
chr7	44860994	44861175	-	44860994	44861180	A5SS	0.5	50	50	ENSMUST00000033057.9	ENSMUSG00000030792.9	Dkkl1	chr7	protein_coding	dickkopf-like 1
chr7	44859895	44861180	-	44859895	44860825	A5SS&ES	0.5	50	50	ENSMUST00000209466.2	ENSMUSG00000030792.9	Dkkl1	chr7	protein_coding	dickkopf-like 1
chr7	44859895	44861180	-	44860994	44861180	3pMXE	0.5	50	50	ENSMUST00000210454.2	ENSMUSG00000030792.9	Dkkl1	chr7	protein_coding	dickkopf-like 1
chr7	44870125	44870512	+	44870125	44873105	A3SS	0.5	50	50	ENSMUST00000033060.14	ENSMUSG00000030796.18	Tead2	chr7	protein_coding	TEA domain family member 2
chr7	44865298	44866637	+	44865256	44866637	A5SS	0.25	50	50	ENSMUST00000033060.14	ENSMUSG00000030796.18	Tead2	chr7	protein_coding	TEA domain family member 2
chr7	44865330	44866637	+	44865256	44866637	A5SS	0.25	50	50	ENSMUST00000033060.14	ENSMUSG00000030796.18	Tead2	chr7	protein_coding	TEA domain family member 2
chr7	44866202	44866637	+	44865256	44866637	A5SS	0.25	50	50	ENSMUST00000033060.14	ENSMUSG00000030796.18	Tead2	chr7	protein_coding	TEA domain family member 2
chr7	44866769	44867505	+	44866874	44867505	A5SS	0.5	50	50	ENSMUST00000033060.14	ENSMUSG00000030796.18	Tead2	chr7	protein_coding	TEA domain family member 2
chr7	44872148	44873105	+	44870125	44873105	A5SS	0.5	50	50	ENSMUST00000033060.14	ENSMUSG00000030796.18	Tead2	chr7	protein_coding	TEA domain family member 2
chr7	44880855	44881607	+	44880894	44881607	A5SS	0.5	50	50	ENSMUST00000033060.14	ENSMUSG00000030796.18	Tead2	chr7	protein_coding	TEA domain family member 2
chr7	44865330	44866637	+	44865298	44866637	A5SS	0.25	50	50	ENSMUST00000210447.2	ENSMUSG00000030796.18	Tead2	chr7	protein_coding	TEA domain family member 2
chr7	44866202	44866637	+	44865298	44866637	A5SS	0.25	50	50	ENSMUST00000210447.2	ENSMUSG00000030796.18	Tead2	chr7	protein_coding	TEA domain family member 2
chr7	44866202	44866637	+	44865330	44866637	A5SS	0.25	50	50	ENSMUST00000211744.2	ENSMUSG00000030796.18	Tead2	chr7	protein_coding	TEA domain family member 2
chr7	44887996	44888384	-	44887996	44888084	5pMXE	0.5	50	50	ENSMUST00000098461.10	ENSMUSG00000030798.16	Cd37	chr7	protein_coding	CD37 antigen
chr7	44883924	44884108	-	44883402	44884108	A3SS	0.5	50	50	ENSMUST00000098461.10	ENSMUSG00000030798.16	Cd37	chr7	protein_coding	CD37 antigen
chr7	44883402	44884048	-	44883402	44884108	A5SS	0.5	50	50	ENSMUST00000098461.10	ENSMUSG00000030798.16	Cd37	chr7	protein_coding	CD37 antigen
chr7	44887996	44888384	-	44887996;44888158	44888084;44888384	ES	0.5	50	50	ENSMUST00000033063.15	ENSMUSG00000030798.16	Cd37	chr7	protein_coding	CD37 antigen
chr7	44932391	44933974	+	44932391	44935866	A3SS	0.5	50	50	ENSMUST00000210861.2	ENSMUSG00000070568.13	Slc6a21	chr7	protein_coding	solute carrier family 6 member 21
chr7	44937281	44937555	+	44937281	44937496	A3SS	0.5	50	50	ENSMUST00000210861.2	ENSMUSG00000070568.13	Slc6a21	chr7	protein_coding	solute carrier family 6 member 21
chr7	44976564;44976876	44976696;44982806	-	44976564	44982806	cassetteExon	0.5	100	100	ENSMUST00000211431.2	ENSMUSG00000038260.11	Trpm4	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 4
chr7	44977319	44982806	-	44976564	44982806	A3SS	0.33	50	50	ENSMUST00000211431.2	ENSMUSG00000038260.11	Trpm4	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 4
chr7	44954291	44954713	-	44954291	44954372	A5SS&ES	0.5	50	50	ENSMUST00000211431.2	ENSMUSG00000038260.11	Trpm4	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 4
chr7	44954504	44954697	-	44954504	44954798	A5SS	0.33	50	50	ENSMUST00000211431.2	ENSMUSG00000038260.11	Trpm4	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 4
chr7	44954504	44954713	-	44954504	44954798	A5SS	0.33	50	50	ENSMUST00000211431.2	ENSMUSG00000038260.11	Trpm4	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 4
chr7	44982876	44983000	-	44982876	44983111	A5SS	0.5	50	50	ENSMUST00000211431.2	ENSMUSG00000038260.11	Trpm4	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 4
chr7	44954291	44954713	-	44954291;44954504	44954372;44954713	ES	0.5	50	50	ENSMUST00000042194.10	ENSMUSG00000038260.11	Trpm4	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 4
chr7	44976876	44982806	-	44976876;44977319	44977145;44982806	ES	0.33	50	50	ENSMUST00000042194.10	ENSMUSG00000038260.11	Trpm4	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 4
chr7	44954504	44954697	-	44954504	44954713	A5SS	0.33	50	50	ENSMUST00000042194.10	ENSMUSG00000038260.11	Trpm4	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 4
chr7	44985049	44987578	+	44987379	44987578	A5SS&ES	0.5	50	50	ENSMUST00000085351.7	ENSMUSG00000038239.12	Hrc	chr7	protein_coding	histidine rich calcium binding protein
chr7	44991925	44993165	-	44991925;44993003	44992977;44993165	ES	0.5	50	50	ENSMUST00000210479.2	ENSMUSG00000003863.19	Ppfia3	chr7	protein_coding	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
chr7	44989426	44989613	-	44989504	44989613	A3SS	0.25	50	50	ENSMUST00000210479.2	ENSMUSG00000003863.19	Ppfia3	chr7	protein_coding	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
chr7	44989441	44989613	-	44989504	44989613	A3SS	0.25	50	50	ENSMUST00000210479.2	ENSMUSG00000003863.19	Ppfia3	chr7	protein_coding	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
chr7	44989479	44989613	-	44989504	44989613	A3SS	0.25	50	50	ENSMUST00000210479.2	ENSMUSG00000003863.19	Ppfia3	chr7	protein_coding	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
chr7	45001698	45002754	-	45001698	45002943	A5SS	0.5	50	50	ENSMUST00000210479.2	ENSMUSG00000003863.19	Ppfia3	chr7	protein_coding	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
chr7	44989426	44989613	-	44989441	44989613	A3SS	0.25	50	50	ENSMUST00000211067.2	ENSMUSG00000003863.19	Ppfia3	chr7	protein_coding	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
chr7	44989479	44989613	-	44989441	44989613	A3SS	0.25	50	50	ENSMUST00000211067.2	ENSMUSG00000003863.19	Ppfia3	chr7	protein_coding	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
chr7	45011243	45016083	-	45011243	45016079	A5SS	0.5	50	50	ENSMUST00000211067.2	ENSMUSG00000003863.19	Ppfia3	chr7	protein_coding	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
chr7	44989479	44989613	-	44989426	44989613	A3SS	0.25	50	50	ENSMUST00000210586.2	ENSMUSG00000003863.19	Ppfia3	chr7	protein_coding	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
chr7	45017891	45018565	-	45017914	45018565	A3SS	0.5	50	50	ENSMUST00000210865.2	ENSMUSG00000003872.10	Lin7b	chr7	protein_coding	lin-7 homolog B (C. elegans)
chr7	45030242;45032608	45032549;45033228	-	45030242	45033228	cassetteExon	0.5	100	100	ENSMUST00000074575.11	ENSMUSG00000063511.12	Snrnp70	chr7	protein_coding	small nuclear ribonucleoprotein 70 (U1)
chr7	45044239;45044596	45044517;45044933	-	45044239	45044933	cassetteExon	0.5	100	100	ENSMUST00000074575.11	ENSMUSG00000063511.12	Snrnp70	chr7	protein_coding	small nuclear ribonucleoprotein 70 (U1)
chr7	45030042	45030141	-	45026867	45030141	A3SS	0.5	50	50	ENSMUST00000074575.11	ENSMUSG00000063511.12	Snrnp70	chr7	protein_coding	small nuclear ribonucleoprotein 70 (U1)
chr7	45030242	45031249	-	45030242	45033228	A5SS	0.33	50	50	ENSMUST00000074575.11	ENSMUSG00000063511.12	Snrnp70	chr7	protein_coding	small nuclear ribonucleoprotein 70 (U1)
chr7	45036877	45041498	-	45036877	45041503	A5SS	0.5	50	50	ENSMUST00000074575.11	ENSMUSG00000063511.12	Snrnp70	chr7	protein_coding	small nuclear ribonucleoprotein 70 (U1)
chr7	45041749	45042129	-	45041749	45044083	A5SS	0.5	50	50	ENSMUST00000074575.11	ENSMUSG00000063511.12	Snrnp70	chr7	protein_coding	small nuclear ribonucleoprotein 70 (U1)
chr7	45026137	45026819	-	45026100	45026819	A3SS	0.5	50	50	ENSMUST00000210514.2	ENSMUSG00000063511.12	Snrnp70	chr7	protein_coding	small nuclear ribonucleoprotein 70 (U1)
chr7	45030242	45033228	-	45032608	45033228	A3SS	0.5	50	50	ENSMUST00000211366.2	ENSMUSG00000063511.12	Snrnp70	chr7	protein_coding	small nuclear ribonucleoprotein 70 (U1)
chr7	45030242	45033228	-	45030242;45032608	45031249;45033228	ES	0.5	50	50	ENSMUST00000211290.2	ENSMUSG00000063511.12	Snrnp70	chr7	protein_coding	small nuclear ribonucleoprotein 70 (U1)
chr7	45030242	45032549	-	45030242	45031249	A5SS	0.33	50	50	ENSMUST00000211290.2	ENSMUSG00000063511.12	Snrnp70	chr7	protein_coding	small nuclear ribonucleoprotein 70 (U1)
chr7	45044239	45044933	-	45044239	45044517	5pMXE	0.5	50	50	ENSMUST00000211378.2	ENSMUSG00000063511.12	Snrnp70	chr7	protein_coding	small nuclear ribonucleoprotein 70 (U1)
chr7	45064017	45064155	+	45063212	45064155	A5SS	0.5	50	50	ENSMUST00000058879.8	ENSMUSG00000074121.4	Ntf5	chr7	protein_coding	neurotrophin 5
chr7	45069252	45070739	+	45069252	45069467	A3SS	0.5	50	50	ENSMUST00000238591.2	ENSMUSG00000118462.2	Lhb	chr7	protein_coding	luteinizing hormone beta
chr7	45071429	45071809	-	45071429;45071630	45071516;45071809	ES	0.33	50	50	ENSMUST00000211214.2	ENSMUSG00000003868.15	Ruvbl2	chr7	protein_coding	RuvB-like protein 2
chr7	45074674	45078077	-	45074674;45077969	45077903;45078077	ES	0.5	50	50	ENSMUST00000211214.2	ENSMUSG00000003868.15	Ruvbl2	chr7	protein_coding	RuvB-like protein 2
chr7	45071558	45071809	-	45071630	45071809	A3SS	0.33	50	50	ENSMUST00000211214.2	ENSMUSG00000003868.15	Ruvbl2	chr7	protein_coding	RuvB-like protein 2
chr7	45078959	45079333	-	45079019	45079333	A3SS	0.5	50	50	ENSMUST00000211214.2	ENSMUSG00000003868.15	Ruvbl2	chr7	protein_coding	RuvB-like protein 2
chr7	45083780	45084044	-	45083780	45084305	A5SS	0.5	50	50	ENSMUST00000211214.2	ENSMUSG00000003868.15	Ruvbl2	chr7	protein_coding	RuvB-like protein 2
chr7	45071429	45071809	-	45071429;45071558	45071516;45071809	ES	0.33	50	50	ENSMUST00000209426.2	ENSMUSG00000003868.15	Ruvbl2	chr7	protein_coding	RuvB-like protein 2
chr7	45086137	45088903	+	45086137;45087717	45087526;45088903	ES	0.5	50	50	ENSMUST00000003964.17	ENSMUSG00000003865.17	Gys1	chr7	protein_coding	glycogen synthase 1, muscle
chr7	45097077	45097322	+	45094281	45097322	A5SS	0.5	50	50	ENSMUST00000003964.17	ENSMUSG00000003865.17	Gys1	chr7	protein_coding	glycogen synthase 1, muscle
chr7	45097452	45097677	+	45097435	45097677	A5SS	0.5	50	50	ENSMUST00000003964.17	ENSMUSG00000003865.17	Gys1	chr7	protein_coding	glycogen synthase 1, muscle
chr7	45108105	45108508	-	45108084	45108508	A3SS	0.5	50	50	ENSMUST00000094434.13	ENSMUSG00000050708.17	Ftl1	chr7	protein_coding	ferritin light polypeptide 1
chr7	45108654	45108748	-	45108654	45108954	A5SS	0.5	50	50	ENSMUST00000094434.13	ENSMUSG00000050708.17	Ftl1	chr7	protein_coding	ferritin light polypeptide 1
chr7	45114748	45115644	-	45114748;45115547	45115401;45115644	ES	0.5	50	50	ENSMUST00000211365.2	ENSMUSG00000003873.12	Bax	chr7	protein_coding	BCL2-associated X protein
chr7	45115695	45125029	-	45115695	45116166	5pMXE	0.5	50	50	ENSMUST00000211365.2	ENSMUSG00000003873.12	Bax	chr7	protein_coding	BCL2-associated X protein
chr7	45111390	45112823	-	45111386	45112823	A3SS	0.5	50	50	ENSMUST00000211365.2	ENSMUSG00000003873.12	Bax	chr7	protein_coding	BCL2-associated X protein
chr7	45115730	45116166	-	45115695	45116166	A3SS	0.5	50	50	ENSMUST00000211365.2	ENSMUSG00000003873.12	Bax	chr7	protein_coding	BCL2-associated X protein
chr7	45114748	45115644	-	45114748	45115401	5pMXE	0.5	50	50	ENSMUST00000211615.2	ENSMUSG00000003873.12	Bax	chr7	protein_coding	BCL2-associated X protein
chr7	45114748	45115644	-	45115547	45115644	3pMXE	0.5	50	50	ENSMUST00000210701.2	ENSMUSG00000109926.2	Gm45808	chr7	protein_coding	predicted gene 45808
chr7	45124799	45125029	-	45115695	45125029	A3SS	0.5	50	50	ENSMUST00000210701.2	ENSMUSG00000109926.2	Gm45808	chr7	protein_coding	predicted gene 45808
chr7	45128557	45129032	-	45128557	45131213	A5SS	0.5	50	50	ENSMUST00000210701.2	ENSMUSG00000109926.2	Gm45808	chr7	protein_coding	predicted gene 45808
chr7	45164130	45165663	+	45164130;45164980	45164842;45165663	ES	0.2	50	50	ENSMUST00000211413.2	ENSMUSG00000023467.19	Tulp2	chr7	protein_coding	tubby-like protein 2
chr7	45163627	45164079	+	45135907	45164079	A5SS	0.5	50	50	ENSMUST00000211413.2	ENSMUSG00000023467.19	Tulp2	chr7	protein_coding	tubby-like protein 2
chr7	45164994	45165663	+	45164980	45165663	A5SS	0.2	50	50	ENSMUST00000211413.2	ENSMUSG00000023467.19	Tulp2	chr7	protein_coding	tubby-like protein 2
chr7	45165408	45165663	+	45164980	45165663	A5SS	0.2	50	50	ENSMUST00000211413.2	ENSMUSG00000023467.19	Tulp2	chr7	protein_coding	tubby-like protein 2
chr7	45171772	45172885	+	45171772	45171864	3pMXE	0.5	50	50	ENSMUST00000210813.2	ENSMUSG00000023467.19	Tulp2	chr7	protein_coding	tubby-like protein 2
chr7	45135907;45164130	45164079;45165663	+	45135907	45165663	cassetteExon	0.5	100	100	ENSMUST00000210813.2	ENSMUSG00000023467.19	Tulp2	chr7	protein_coding	tubby-like protein 2
chr7	45164980	45165663	+	45135907	45165663	A5SS	0.2	50	50	ENSMUST00000210813.2	ENSMUSG00000023467.19	Tulp2	chr7	protein_coding	tubby-like protein 2
chr7	45164994	45165663	+	45135907	45165663	A5SS	0.2	50	50	ENSMUST00000210813.2	ENSMUSG00000023467.19	Tulp2	chr7	protein_coding	tubby-like protein 2
chr7	45165408	45165663	+	45135907	45165663	A5SS	0.2	50	50	ENSMUST00000210813.2	ENSMUSG00000023467.19	Tulp2	chr7	protein_coding	tubby-like protein 2
chr7	45165764	45165940	+	45165800	45165940	A5SS	0.5	50	50	ENSMUST00000210813.2	ENSMUSG00000023467.19	Tulp2	chr7	protein_coding	tubby-like protein 2
chr7	45168309	45169155	+	45168330	45169155	A5SS	0.5	50	50	ENSMUST00000210813.2	ENSMUSG00000023467.19	Tulp2	chr7	protein_coding	tubby-like protein 2
chr7	45164130	45165663	+	45164130;45164994	45164842;45165663	ES	0.25	50	50	ENSMUST00000210532.2	ENSMUSG00000023467.19	Tulp2	chr7	protein_coding	tubby-like protein 2
chr7	45165408	45165663	+	45164994	45165663	A5SS	0.25	50	50	ENSMUST00000210532.2	ENSMUSG00000023467.19	Tulp2	chr7	protein_coding	tubby-like protein 2
chr7	45135907	45165663	+	45164130	45165663	5pMXE	0.2	50	50	ENSMUST00000085331.14	ENSMUSG00000023467.19	Tulp2	chr7	protein_coding	tubby-like protein 2
chr7	45165408	45165663	+	45164130	45165663	A5SS	0.2	50	50	ENSMUST00000085331.14	ENSMUSG00000023467.19	Tulp2	chr7	protein_coding	tubby-like protein 2
chr7	45151139	45159130	-	45151139;45152709	45152602;45159130	ES	0.5	50	50	ENSMUST00000211765.2	ENSMUSG00000030824.18	Nucb1	chr7	protein_coding	nucleobindin 1
chr7	45143625	45144042	-	45143637	45144042	A3SS	0.5	50	50	ENSMUST00000211765.2	ENSMUSG00000030824.18	Nucb1	chr7	protein_coding	nucleobindin 1
chr7	45159271	45159514	-	45159271	45159747	A5SS	0.33	50	50	ENSMUST00000211765.2	ENSMUSG00000030824.18	Nucb1	chr7	protein_coding	nucleobindin 1
chr7	45159271	45159656	-	45159271	45159747	A5SS	0.33	50	50	ENSMUST00000211765.2	ENSMUSG00000030824.18	Nucb1	chr7	protein_coding	nucleobindin 1
chr7	45151139	45152602	-	45148334	45152602	A3SS	0.5	50	50	ENSMUST00000210449.2	ENSMUSG00000030824.18	Nucb1	chr7	protein_coding	nucleobindin 1
chr7	45148334	45149226	-	45148334	45152602	A5SS	0.5	50	50	ENSMUST00000210449.2	ENSMUSG00000030824.18	Nucb1	chr7	protein_coding	nucleobindin 1
chr7	45151139	45159130	-	45151139	45152602	5pMXE	0.5	50	50	ENSMUST00000210394.2	ENSMUSG00000030824.18	Nucb1	chr7	protein_coding	nucleobindin 1
chr7	45159271	45159514	-	45159271	45159656	A5SS	0.33	50	50	ENSMUST00000211682.2	ENSMUSG00000030824.18	Nucb1	chr7	protein_coding	nucleobindin 1
chr7	45148334;45152709	45152602;45159130	-	45148334;45151139	45149226;45159130	MXE	0.5	100	100	ENSMUST00000211343.2	ENSMUSG00000030824.18	Nucb1	chr7	protein_coding	nucleobindin 1
chr7	45151139	45159130	-	45152709	45159130	3pMXE	0.5	50	50	ENSMUST00000209509.2	ENSMUSG00000030824.18	Nucb1	chr7	protein_coding	nucleobindin 1
chr7	45172746	45173163	-	45172697	45173163	A3SS	0.5	50	50	ENSMUST00000211212.2	ENSMUSG00000040435.13	Ppp1r15a	chr7	protein_coding	protein phosphatase 1, regulatory subunit 15A
chr7	45183834	45184168	+	45183834;45184031	45183931;45184168	ES	0.5	50	50	ENSMUST00000211227.2	ENSMUSG00000040428.20	Plekha4	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4
chr7	45187901	45189904	+	45187901;45188713	45188630;45189904	ES	0.5	50	50	ENSMUST00000211227.2	ENSMUSG00000040428.20	Plekha4	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4
chr7	45197514;45198027	45197942;45198484	+	45197514	45198484	cassetteExon	0.5	100	100	ENSMUST00000211227.2	ENSMUSG00000040428.20	Plekha4	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4
chr7	45179557	45179993	+	45175865	45179993	A5SS	0.5	50	50	ENSMUST00000211227.2	ENSMUSG00000040428.20	Plekha4	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4
chr7	45199389	45202993	+	45199389;45202718	45202669;45202993	ES	0.33	50	50	ENSMUST00000051810.15	ENSMUSG00000040428.20	Plekha4	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4
chr7	45202718	45203189	+	45202718;45203105	45202993;45203189	ES	0.33	50	50	ENSMUST00000051810.15	ENSMUSG00000040428.20	Plekha4	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4
chr7	45203105	45203198	+	45203105	45203189	A3SS	0.5	50	50	ENSMUST00000051810.15	ENSMUSG00000040428.20	Plekha4	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4
chr7	45198730	45202993	+	45198730;45199389	45199228;45202993	ES	0.33	50	50	ENSMUST00000211797.2	ENSMUSG00000040428.20	Plekha4	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4
chr7	45199389	45203189	+	45199389;45203105	45202993;45203189	ES	0.33	50	50	ENSMUST00000211797.2	ENSMUSG00000040428.20	Plekha4	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4
chr7	45199389;45202718	45202669;45203189	+	45199389;45203105	45202993;45203189	MXE	0.5	100	100	ENSMUST00000211797.2	ENSMUSG00000040428.20	Plekha4	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4
chr7	45179557	45179906	+	45179557	45181561	A3SS	0.33	50	50	ENSMUST00000211797.2	ENSMUSG00000040428.20	Plekha4	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4
chr7	45179557	45179993	+	45179557	45181561	A3SS	0.33	50	50	ENSMUST00000211797.2	ENSMUSG00000040428.20	Plekha4	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4
chr7	45179557	45179993	+	45179557	45179906	A3SS	0.33	50	50	ENSMUST00000210480.2	ENSMUSG00000040428.20	Plekha4	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4
chr7	45202718	45202993	+	45198730	45202993	A5SS	0.33	50	50	ENSMUST00000211155.2	ENSMUSG00000040428.20	Plekha4	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4
chr7	45199389	45203189	+	45199389;45202718	45202669;45203189	ES	0.33	50	50	ENSMUST00000210797.2	ENSMUSG00000040428.20	Plekha4	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4
chr7	45199389;45203105	45202669;45203189	+	45199389	45203189	cassetteExon	0.5	100	100	ENSMUST00000211348.2	ENSMUSG00000040428.20	Plekha4	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4
chr7	45199389	45203189	+	45203105	45203189	5pMXE	0.33	50	50	ENSMUST00000211106.2	ENSMUSG00000040428.20	Plekha4	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4
chr7	45202718	45203189	+	45203105	45203189	A5SS	0.33	50	50	ENSMUST00000211106.2	ENSMUSG00000040428.20	Plekha4	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4
chr7	45212443	45215544	+	45212443;45215446	45215379;45215544	ES	0.5	50	50	ENSMUST00000107752.12	ENSMUSG00000030825.20	Hsd17b14	chr7	protein_coding	hydroxysteroid (17-beta) dehydrogenase 14
chr7	45215640	45216993	+	45215640	45216071	3pMXE	0.5	50	50	ENSMUST00000107752.12	ENSMUSG00000030825.20	Hsd17b14	chr7	protein_coding	hydroxysteroid (17-beta) dehydrogenase 14
chr7	45207098;45208530	45208450;45208805	+	45207098	45208805	cassetteExon	0.5	100	100	ENSMUST00000107752.12	ENSMUSG00000030825.20	Hsd17b14	chr7	protein_coding	hydroxysteroid (17-beta) dehydrogenase 14
chr7	45211629	45212339	+	45208896	45212339	A5SS	0.5	50	50	ENSMUST00000107752.12	ENSMUSG00000030825.20	Hsd17b14	chr7	protein_coding	hydroxysteroid (17-beta) dehydrogenase 14
chr7	45212578	45215379	+	45212443	45215379	A5SS	0.5	50	50	ENSMUST00000107752.12	ENSMUSG00000030825.20	Hsd17b14	chr7	protein_coding	hydroxysteroid (17-beta) dehydrogenase 14
chr7	45212443	45215544	+	45212443	45215379	3pMXE	0.5	50	50	ENSMUST00000211029.2	ENSMUSG00000030825.20	Hsd17b14	chr7	protein_coding	hydroxysteroid (17-beta) dehydrogenase 14
chr7	45223946	45224551	-	45223946;45224201	45224032;45224551	ES	0.2	50	50	ENSMUST00000210383.2	ENSMUSG00000109644.2	0610005C13Rik	chr7	lncRNA	RIKEN cDNA 0610005C13 gene
chr7	45217803;45220609	45220410;45223837	-	45217803	45223837	cassetteExon	0.5	100	100	ENSMUST00000210383.2	ENSMUSG00000109644.2	0610005C13Rik	chr7	lncRNA	RIKEN cDNA 0610005C13 gene
chr7	45217803;45220616	45220410;45223837	-	45217803	45223837	cassetteExon	0.5	100	100	ENSMUST00000210383.2	ENSMUSG00000109644.2	0610005C13Rik	chr7	lncRNA	RIKEN cDNA 0610005C13 gene
chr7	45224106	45224551	-	45224201	45224551	A3SS	0.2	50	50	ENSMUST00000210383.2	ENSMUSG00000109644.2	0610005C13Rik	chr7	lncRNA	RIKEN cDNA 0610005C13 gene
chr7	45224231	45224551	-	45224201	45224551	A3SS	0.2	50	50	ENSMUST00000210383.2	ENSMUSG00000109644.2	0610005C13Rik	chr7	lncRNA	RIKEN cDNA 0610005C13 gene
chr7	45224270	45224551	-	45224201	45224551	A3SS	0.2	50	50	ENSMUST00000210383.2	ENSMUSG00000109644.2	0610005C13Rik	chr7	lncRNA	RIKEN cDNA 0610005C13 gene
chr7	45219706	45220410	-	45217803	45220410	A3SS	0.33	50	50	ENSMUST00000210569.2	ENSMUSG00000109644.2	0610005C13Rik	chr7	lncRNA	RIKEN cDNA 0610005C13 gene
chr7	45219979	45220410	-	45217803	45220410	A3SS	0.33	50	50	ENSMUST00000210569.2	ENSMUSG00000109644.2	0610005C13Rik	chr7	lncRNA	RIKEN cDNA 0610005C13 gene
chr7	45220609	45223837	-	45220616	45223837	A3SS	0.33	50	50	ENSMUST00000210569.2	ENSMUSG00000109644.2	0610005C13Rik	chr7	lncRNA	RIKEN cDNA 0610005C13 gene
chr7	45223946	45224551	-	45223946;45224270	45224032;45224551	ES	0.2	50	50	ENSMUST00000209416.2	ENSMUSG00000109644.2	0610005C13Rik	chr7	lncRNA	RIKEN cDNA 0610005C13 gene
chr7	45224106	45224551	-	45224270	45224551	A3SS	0.2	50	50	ENSMUST00000209416.2	ENSMUSG00000109644.2	0610005C13Rik	chr7	lncRNA	RIKEN cDNA 0610005C13 gene
chr7	45224231	45224551	-	45224270	45224551	A3SS	0.2	50	50	ENSMUST00000209416.2	ENSMUSG00000109644.2	0610005C13Rik	chr7	lncRNA	RIKEN cDNA 0610005C13 gene
chr7	45223946	45224551	-	45223946;45224231	45224032;45224551	ES	0.2	50	50	ENSMUST00000211209.2	ENSMUSG00000109644.2	0610005C13Rik	chr7	lncRNA	RIKEN cDNA 0610005C13 gene
chr7	45224106	45224551	-	45224231	45224551	A3SS	0.2	50	50	ENSMUST00000211209.2	ENSMUSG00000109644.2	0610005C13Rik	chr7	lncRNA	RIKEN cDNA 0610005C13 gene
chr7	45223946;45224106	45224032;45224551	-	45223946	45224551	cassetteExon	0.5	100	100	ENSMUST00000209910.2	ENSMUSG00000109644.2	0610005C13Rik	chr7	lncRNA	RIKEN cDNA 0610005C13 gene
chr7	45217803	45223837	-	45220616	45223837	3pMXE	0.33	50	50	ENSMUST00000210866.2	ENSMUSG00000109644.2	0610005C13Rik	chr7	lncRNA	RIKEN cDNA 0610005C13 gene
chr7	45219706	45220410	-	45219979	45220410	A3SS	0.33	50	50	ENSMUST00000211521.2	ENSMUSG00000109644.2	0610005C13Rik	chr7	lncRNA	RIKEN cDNA 0610005C13 gene
chr7	45237215	45237663	+	45237215;45237444	45237359;45237663	ES	0.5	50	50	ENSMUST00000033098.16	ENSMUSG00000030826.20	Bcat2	chr7	protein_coding	branched chain aminotransferase 2, mitochondrial
chr7	45234451	45234550	+	45234451	45234535	A3SS	0.5	50	50	ENSMUST00000033098.16	ENSMUSG00000030826.20	Bcat2	chr7	protein_coding	branched chain aminotransferase 2, mitochondrial
chr7	45220976	45224855	+	45219823	45224855	A5SS	0.25	50	50	ENSMUST00000033098.16	ENSMUSG00000030826.20	Bcat2	chr7	protein_coding	branched chain aminotransferase 2, mitochondrial
chr7	45224614	45224855	+	45219823	45224855	A5SS	0.25	50	50	ENSMUST00000033098.16	ENSMUSG00000030826.20	Bcat2	chr7	protein_coding	branched chain aminotransferase 2, mitochondrial
chr7	45224622	45224855	+	45219823	45224855	A5SS	0.25	50	50	ENSMUST00000033098.16	ENSMUSG00000030826.20	Bcat2	chr7	protein_coding	branched chain aminotransferase 2, mitochondrial
chr7	45224614	45224855	+	45220976	45224855	A5SS	0.25	50	50	ENSMUST00000209204.2	ENSMUSG00000030826.20	Bcat2	chr7	protein_coding	branched chain aminotransferase 2, mitochondrial
chr7	45224622	45224855	+	45220976	45224855	A5SS	0.25	50	50	ENSMUST00000209204.2	ENSMUSG00000030826.20	Bcat2	chr7	protein_coding	branched chain aminotransferase 2, mitochondrial
chr7	45224622	45224855	+	45224614	45224855	A5SS	0.5	50	50	ENSMUST00000211173.2	ENSMUSG00000030826.20	Bcat2	chr7	protein_coding	branched chain aminotransferase 2, mitochondrial
chr7	45267171	45268184	+	45267171	45268046	3pMXE	0.5	50	50	ENSMUST00000210150.2	ENSMUSG00000008461.7	Fut1	chr7	protein_coding	fucosyltransferase 1
chr7	45281219	45282092	-	45280639	45282092	A3SS	0.5	50	50	ENSMUST00000211418.2	ENSMUSG00000109998.2	Gm45437	chr7	lncRNA	predicted gene 45437
chr7	45300772;45305020	45304917;45315622	-	45300772	45315622	cassetteExon	0.5	100	100	ENSMUST00000069800.6	ENSMUSG00000055978.6	Fut2	chr7	protein_coding	fucosyltransferase 2
chr7	45301014	45315622	-	45300772	45315622	A3SS	0.25	50	50	ENSMUST00000069800.6	ENSMUSG00000055978.6	Fut2	chr7	protein_coding	fucosyltransferase 2
chr7	45315248	45315622	-	45300772	45315622	A3SS	0.25	50	50	ENSMUST00000069800.6	ENSMUSG00000055978.6	Fut2	chr7	protein_coding	fucosyltransferase 2
chr7	45301014	45315622	-	45305020	45315622	A3SS&ES	0.25	50	50	ENSMUST00000210620.2	ENSMUSG00000055978.6	Fut2	chr7	protein_coding	fucosyltransferase 2
chr7	45315248	45315622	-	45305020	45315622	A3SS	0.25	50	50	ENSMUST00000210620.2	ENSMUSG00000055978.6	Fut2	chr7	protein_coding	fucosyltransferase 2
chr7	45315248	45315622	-	45301014	45315622	A3SS	0.25	50	50	ENSMUST00000211324.2	ENSMUSG00000055978.6	Fut2	chr7	protein_coding	fucosyltransferase 2
chr7	45336249	45340836	+	45336249;45340659	45340471;45340836	ES	0.5	50	50	ENSMUST00000182750.10	ENSMUSG00000070564.16	Ntn5	chr7	protein_coding	netrin 5
chr7	45341845;45342678	45342620;45343420	+	45341845	45343420	cassetteExon	0.5	100	100	ENSMUST00000182750.10	ENSMUSG00000070564.16	Ntn5	chr7	protein_coding	netrin 5
chr7	45333922	45335605	+	45333922	45336001	A3SS	0.5	50	50	ENSMUST00000182750.10	ENSMUSG00000070564.16	Ntn5	chr7	protein_coding	netrin 5
chr7	45350790	45352257	+	45350790;45352043	45351858;45352257	ES	0.5	50	50	ENSMUST00000003360.10	ENSMUSG00000003273.15	Car11	chr7	protein_coding	carbonic anhydrase 11
chr7	45352352	45352883	+	45352352;45352558	45352486;45352883	ES	0.5	50	50	ENSMUST00000003360.10	ENSMUSG00000003273.15	Car11	chr7	protein_coding	carbonic anhydrase 11
chr7	45353037	45353913	+	45353037;45353302	45353137;45353913	ES	0.5	50	50	ENSMUST00000003360.10	ENSMUSG00000003273.15	Car11	chr7	protein_coding	carbonic anhydrase 11
chr7	45352352	45352883	+	45352558	45352883	A5SS	0.5	50	50	ENSMUST00000210872.2	ENSMUSG00000003273.15	Car11	chr7	protein_coding	carbonic anhydrase 11
chr7	45355186	45357684	+	45355186;45356440	45356030;45357684	ES	0.33	50	50	ENSMUST00000080885.12	ENSMUSG00000059824.13	Dbp	chr7	protein_coding	D site albumin promoter binding protein
chr7	45356140	45357684	+	45356440	45357684	A5SS	0.33	50	50	ENSMUST00000080885.12	ENSMUSG00000059824.13	Dbp	chr7	protein_coding	D site albumin promoter binding protein
chr7	45355186;45356140	45356030;45357684	+	45355186	45357684	cassetteExon	0.5	100	100	ENSMUST00000211513.2	ENSMUSG00000059824.13	Dbp	chr7	protein_coding	D site albumin promoter binding protein
chr7	45361775	45362684	-	45361775;45362029	45361880;45362684	ES	0.5	50	50	ENSMUST00000107737.11	ENSMUSG00000057342.16	Sphk2	chr7	protein_coding	sphingosine kinase 2
chr7	45363152	45367125	-	45363152;45366487	45366417;45367125	ES	0.5	50	50	ENSMUST00000107737.11	ENSMUSG00000057342.16	Sphk2	chr7	protein_coding	sphingosine kinase 2
chr7	45363152	45364021	-	45363152	45366417	A5SS	0.33	50	50	ENSMUST00000107737.11	ENSMUSG00000057342.16	Sphk2	chr7	protein_coding	sphingosine kinase 2
chr7	45363152	45364021	-	45363152	45367125	A5SS	0.33	50	50	ENSMUST00000210060.2	ENSMUSG00000057342.16	Sphk2	chr7	protein_coding	sphingosine kinase 2
chr7	45367563	45368953	+	45367563;45368763	45368677;45368953	ES	0.5	50	50	ENSMUST00000210640.2	ENSMUSG00000059070.17	Rpl18	chr7	protein_coding	ribosomal protein L18
chr7	45369060	45369718	+	45369060;45369442	45369344;45369718	ES	0.5	50	50	ENSMUST00000210640.2	ENSMUSG00000059070.17	Rpl18	chr7	protein_coding	ribosomal protein L18
chr7	45369442	45370138	+	45369442;45369911	45369718;45370138	ES	0.5	50	50	ENSMUST00000210640.2	ENSMUSG00000059070.17	Rpl18	chr7	protein_coding	ribosomal protein L18
chr7	45369442	45369862	+	45369442	45369718	A3SS	0.33	50	50	ENSMUST00000210640.2	ENSMUSG00000059070.17	Rpl18	chr7	protein_coding	ribosomal protein L18
chr7	45368004	45368677	+	45367563	45368677	A5SS	0.5	50	50	ENSMUST00000210640.2	ENSMUSG00000059070.17	Rpl18	chr7	protein_coding	ribosomal protein L18
chr7	45369060;45369442	45369344;45370138	+	45369060;45369911	45369718;45370138	MXE	0.5	100	100	ENSMUST00000209693.2	ENSMUSG00000059070.17	Rpl18	chr7	protein_coding	ribosomal protein L18
chr7	45367563	45368953	+	45368763	45368953	5pMXE	0.5	50	50	ENSMUST00000211325.2	ENSMUSG00000059070.17	Rpl18	chr7	protein_coding	ribosomal protein L18
chr7	45369060	45369718	+	45369060	45369344	3pMXE	0.5	50	50	ENSMUST00000211325.2	ENSMUSG00000059070.17	Rpl18	chr7	protein_coding	ribosomal protein L18
chr7	45369442	45370138	+	45369442	45369718	3pMXE	0.33	50	50	ENSMUST00000211435.2	ENSMUSG00000059070.17	Rpl18	chr7	protein_coding	ribosomal protein L18
chr7	45369060	45369718	+	45369442	45369718	A5SS	0.5	50	50	ENSMUST00000211425.2	ENSMUSG00000059070.17	Rpl18	chr7	protein_coding	ribosomal protein L18
chr7	45369442;45369911	45369862;45370138	+	45369442	45370138	cassetteExon	0.5	100	100	ENSMUST00000209867.2	ENSMUSG00000059070.17	Rpl18	chr7	protein_coding	ribosomal protein L18
chr7	45369442	45370138	+	45369911	45370138	5pMXE	0.5	50	50	ENSMUST00000209723.2	ENSMUSG00000059070.17	Rpl18	chr7	protein_coding	ribosomal protein L18
chr7	45375336	45376056	+	45373402	45376056	A5SS	0.5	50	50	ENSMUST00000129507.5	ENSMUSG00000054161.13	Fam83e	chr7	protein_coding	family with sequence similarity 83, member E
chr7	45391620	45433208	-	45391620	45408816	5pMXE	0.25	50	50	ENSMUST00000075571.16	ENSMUSG00000003271.18	Sult2b1	chr7	protein_coding	sulfotransferase family, cytosolic, 2B, member 1
chr7	45408317	45408816	-	45391620	45408816	A3SS	0.5	50	50	ENSMUST00000075571.16	ENSMUSG00000003271.18	Sult2b1	chr7	protein_coding	sulfotransferase family, cytosolic, 2B, member 1
chr7	45391620	45391735	-	45391620	45408816	A5SS	0.25	50	50	ENSMUST00000075571.16	ENSMUSG00000003271.18	Sult2b1	chr7	protein_coding	sulfotransferase family, cytosolic, 2B, member 1
chr7	45391620	45392055	-	45391620	45408816	A5SS	0.25	50	50	ENSMUST00000075571.16	ENSMUSG00000003271.18	Sult2b1	chr7	protein_coding	sulfotransferase family, cytosolic, 2B, member 1
chr7	45391620	45391735	-	45391620	45433208	A5SS	0.25	50	50	ENSMUST00000209739.2	ENSMUSG00000003271.18	Sult2b1	chr7	protein_coding	sulfotransferase family, cytosolic, 2B, member 1
chr7	45391620	45392055	-	45391620	45433208	A5SS	0.25	50	50	ENSMUST00000209739.2	ENSMUSG00000003271.18	Sult2b1	chr7	protein_coding	sulfotransferase family, cytosolic, 2B, member 1
chr7	45391620	45392055	-	45391620	45391735	5pMXE	0.25	50	50	ENSMUST00000210147.2	ENSMUSG00000003271.18	Sult2b1	chr7	protein_coding	sulfotransferase family, cytosolic, 2B, member 1
chr7	45436894;45437178	45437070;45437328	+	45436894	45437328	cassetteExon	0.5	100	100	ENSMUST00000209617.2	ENSMUSG00000062044.17	Lmtk3	chr7	protein_coding	lemur tyrosine kinase 3
chr7	45437446;45438739	45438574;45440299	+	45437446	45440299	cassetteExon	0.5	100	100	ENSMUST00000209617.2	ENSMUSG00000062044.17	Lmtk3	chr7	protein_coding	lemur tyrosine kinase 3
chr7	45433350	45434993	+	45433404	45434993	A5SS	0.33	50	50	ENSMUST00000209617.2	ENSMUSG00000062044.17	Lmtk3	chr7	protein_coding	lemur tyrosine kinase 3
chr7	45434872	45434993	+	45433404	45434993	A5SS	0.33	50	50	ENSMUST00000209617.2	ENSMUSG00000062044.17	Lmtk3	chr7	protein_coding	lemur tyrosine kinase 3
chr7	45434872	45434993	+	45433350	45434993	A5SS	0.33	50	50	ENSMUST00000209701.2	ENSMUSG00000062044.17	Lmtk3	chr7	protein_coding	lemur tyrosine kinase 3
chr7	45436894	45437328	+	45436894	45437070	3pMXE	0.5	50	50	ENSMUST00000211309.2	ENSMUSG00000062044.17	Lmtk3	chr7	protein_coding	lemur tyrosine kinase 3
chr7	45436894	45437328	+	45437178	45437328	5pMXE	0.5	50	50	ENSMUST00000211127.2	ENSMUSG00000062044.17	Lmtk3	chr7	protein_coding	lemur tyrosine kinase 3
chr7	45461722	45462433	-	45461722;45462337	45462271;45462433	ES	0.5	50	50	ENSMUST00000107729.10	ENSMUSG00000003269.18	Cyth2	chr7	protein_coding	cytohesin 2
chr7	45462580	45463844	-	45462580	45463522	5pMXE	0.5	50	50	ENSMUST00000107729.10	ENSMUSG00000003269.18	Cyth2	chr7	protein_coding	cytohesin 2
chr7	45457873;45458156	45458154;45459551	-	45457873	45459551	cassetteExon	0.5	100	100	ENSMUST00000107729.10	ENSMUSG00000003269.18	Cyth2	chr7	protein_coding	cytohesin 2
chr7	45457876	45459551	-	45457873	45459551	A3SS	0.33	50	50	ENSMUST00000107729.10	ENSMUSG00000003269.18	Cyth2	chr7	protein_coding	cytohesin 2
chr7	45457873	45459547	-	45457873	45459551	A5SS	0.33	50	50	ENSMUST00000107729.10	ENSMUSG00000003269.18	Cyth2	chr7	protein_coding	cytohesin 2
chr7	45458156	45459551	-	45457876	45459551	A3SS	0.33	50	50	ENSMUST00000056820.13	ENSMUSG00000003269.18	Cyth2	chr7	protein_coding	cytohesin 2
chr7	45461033	45461604	-	45457511	45461604	A3SS	0.5	50	50	ENSMUST00000210137.2	ENSMUSG00000003269.18	Cyth2	chr7	protein_coding	cytohesin 2
chr7	45457511	45457600	-	45457511	45461604	A5SS	0.5	50	50	ENSMUST00000210137.2	ENSMUSG00000003269.18	Cyth2	chr7	protein_coding	cytohesin 2
chr7	45457873	45458154	-	45457873	45459547	A5SS	0.33	50	50	ENSMUST00000209245.2	ENSMUSG00000003269.18	Cyth2	chr7	protein_coding	cytohesin 2
chr7	45457873	45458154	-	45457902	45458154	A3SS	0.5	50	50	ENSMUST00000210853.3	ENSMUSG00000003269.18	Cyth2	chr7	protein_coding	cytohesin 2
chr7	45457873	45459551	-	45458156	45459551	A3SS&ES	0.33	50	50	ENSMUST00000210853.3	ENSMUSG00000003269.18	Cyth2	chr7	protein_coding	cytohesin 2
chr7	45469557	45472733	-	45469557	45474041	A5SS	0.5	50	50	ENSMUST00000071937.7	ENSMUSG00000058743.7	Kcnj14	chr7	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 14
chr7	45479568	45480019	-	45479568;45479833	45479716;45480019	ES	0.5	50	50	ENSMUST00000131384.3	ENSMUSG00000053801.19	Grwd1	chr7	protein_coding	glutamate-rich WD repeat containing 1
chr7	45479568	45480019	-	45479833	45480019	A3SS&ES	0.5	50	50	ENSMUST00000211265.2	ENSMUSG00000053801.19	Grwd1	chr7	protein_coding	glutamate-rich WD repeat containing 1
chr7	45480374	45483645	+	45480524	45483645	A5SS	0.33	50	50	ENSMUST00000209301.2	ENSMUSG00000110020.2	Gm45441	chr7	lncRNA	predicted gene 45441
chr7	45483513	45483645	+	45480524	45483645	A5SS	0.33	50	50	ENSMUST00000209301.2	ENSMUSG00000110020.2	Gm45441	chr7	lncRNA	predicted gene 45441
chr7	45483513	45483645	+	45480374	45483645	A5SS	0.33	50	50	ENSMUST00000209250.2	ENSMUSG00000110020.2	Gm45441	chr7	lncRNA	predicted gene 45441
chr7	45522598	45523183	+	45522525	45523183	A5SS	0.5	50	50	ENSMUST00000002855.14	ENSMUSG00000002778.15	Kdelr1	chr7	protein_coding	KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1
chr7	45530983	45532401	+	45531176	45532401	A5SS	0.5	50	50	ENSMUST00000002855.14	ENSMUSG00000002778.15	Kdelr1	chr7	protein_coding	KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1
chr7	45536549	45538036	-	45534679	45538036	A3SS	0.33	50	50	ENSMUST00000211254.2	ENSMUSG00000040231.17	Syngr4	chr7	protein_coding	synaptogyrin 4
chr7	45536930	45538036	-	45534679	45538036	A3SS	0.33	50	50	ENSMUST00000211254.2	ENSMUSG00000040231.17	Syngr4	chr7	protein_coding	synaptogyrin 4
chr7	45545315	45546032	-	45545312	45546032	A3SS	0.5	50	50	ENSMUST00000211254.2	ENSMUSG00000040231.17	Syngr4	chr7	protein_coding	synaptogyrin 4
chr7	45536549	45538036	-	45536549;45536930	45536791;45538036	ES	0.5	50	50	ENSMUST00000039049.16	ENSMUSG00000040231.17	Syngr4	chr7	protein_coding	synaptogyrin 4
chr7	45547090	45556342	+	45547090;45549160	45549056;45556342	ES	0.5	50	50	ENSMUST00000069772.16	ENSMUSG00000002781.20	Tmem143	chr7	protein_coding	transmembrane protein 143
chr7	45556536	45558746	+	45556536;45557661	45557531;45558746	ES	0.33	50	50	ENSMUST00000069772.16	ENSMUSG00000002781.20	Tmem143	chr7	protein_coding	transmembrane protein 143
chr7	45549160	45556371	+	45549160	45556342	A3SS	0.5	50	50	ENSMUST00000069772.16	ENSMUSG00000002781.20	Tmem143	chr7	protein_coding	transmembrane protein 143
chr7	45547173	45549056	+	45547090	45549056	A5SS	0.5	50	50	ENSMUST00000069772.16	ENSMUSG00000002781.20	Tmem143	chr7	protein_coding	transmembrane protein 143
chr7	45558357	45558746	+	45557661	45558746	A5SS	0.33	50	50	ENSMUST00000069772.16	ENSMUSG00000002781.20	Tmem143	chr7	protein_coding	transmembrane protein 143
chr7	45558357	45558746	+	45556536	45558746	A5SS	0.33	50	50	ENSMUST00000209292.2	ENSMUSG00000002781.20	Tmem143	chr7	protein_coding	transmembrane protein 143
chr7	45547090	45556342	+	45549160	45556342	A5SS&ES	0.5	50	50	ENSMUST00000209580.2	ENSMUSG00000002781.20	Tmem143	chr7	protein_coding	transmembrane protein 143
chr7	45547090	45556342	+	45547090	45549056	3pMXE	0.5	50	50	ENSMUST00000210044.2	ENSMUSG00000002781.20	Tmem143	chr7	protein_coding	transmembrane protein 143
chr7	45556536	45558746	+	45556536	45557531	3pMXE	0.5	50	50	ENSMUST00000210692.2	ENSMUSG00000002781.20	Tmem143	chr7	protein_coding	transmembrane protein 143
chr7	45569461	45570666	-	45569461;45569828	45569713;45570666	ES	0.5	50	50	ENSMUST00000038876.13	ENSMUSG00000040212.13	Emp3	chr7	protein_coding	epithelial membrane protein 3
chr7	45569828	45570060	-	45569828	45570666	A5SS	0.33	50	50	ENSMUST00000038876.13	ENSMUSG00000040212.13	Emp3	chr7	protein_coding	epithelial membrane protein 3
chr7	45569828	45570551	-	45569828	45570666	A5SS	0.33	50	50	ENSMUST00000038876.13	ENSMUSG00000040212.13	Emp3	chr7	protein_coding	epithelial membrane protein 3
chr7	45569828	45570551	-	45569828	45570060	5pMXE	0.33	50	50	ENSMUST00000164119.3	ENSMUSG00000040212.13	Emp3	chr7	protein_coding	epithelial membrane protein 3
chr7	45573810	45573922	+	45573690	45573922	A5SS	0.5	50	50	ENSMUST00000210602.2	ENSMUSG00000040189.19	Odad1	chr7	protein_coding	outer dynein arm docking complex subunit 1
chr7	45586093	45591084	+	45586093;45589146	45589079;45591084	ES	0.5	50	50	ENSMUST00000210039.3	ENSMUSG00000040189.19	Odad1	chr7	protein_coding	outer dynein arm docking complex subunit 1
chr7	45578680	45580486	+	45578680	45585695	A3SS	0.5	50	50	ENSMUST00000210039.3	ENSMUSG00000040189.19	Odad1	chr7	protein_coding	outer dynein arm docking complex subunit 1
chr7	45597144	45597410	+	45597144	45597406	A3SS	0.5	50	50	ENSMUST00000210039.3	ENSMUSG00000040189.19	Odad1	chr7	protein_coding	outer dynein arm docking complex subunit 1
chr7	45626368	45626668	-	45617144	45626668	A3SS	0.5	50	50	ENSMUST00000211220.2	ENSMUSG00000030834.8	Abcc6	chr7	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 6
chr7	45617144	45622649	-	45617144	45626668	A5SS	0.5	50	50	ENSMUST00000211220.2	ENSMUSG00000030834.8	Abcc6	chr7	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 6
chr7	45646246;45646398	45646337;45648074	-	45646246	45648074	cassetteExon	0.5	100	100	ENSMUST00000002850.8	ENSMUSG00000030834.8	Abcc6	chr7	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 6
chr7	45749076;45749306	45749248;45750052	-	45749076	45750052	cassetteExon	0.5	100	100	ENSMUST00000180081.3	ENSMUSG00000096146.3	Kcnj11	chr7	protein_coding	potassium inwardly rectifying channel, subfamily J, member 11
chr7	45749076	45750052	-	45749076	45749248	5pMXE	0.5	50	50	ENSMUST00000209881.2	ENSMUSG00000096146.3	Kcnj11	chr7	protein_coding	potassium inwardly rectifying channel, subfamily J, member 11
chr7	45749076	45750052	-	45749306	45750052	A3SS	0.5	50	50	ENSMUST00000209291.2	ENSMUSG00000096146.3	Kcnj11	chr7	protein_coding	potassium inwardly rectifying channel, subfamily J, member 11
chr7	45754185	45755233	-	45754185;45754950	45754888;45755233	ES	0.5	50	50	ENSMUST00000210655.2	ENSMUSG00000040136.11	Abcc8	chr7	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 8
chr7	45754185;45754434	45754325;45754888	-	45754185	45754888	cassetteExon	0.5	100	100	ENSMUST00000210655.2	ENSMUSG00000040136.11	Abcc8	chr7	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 8
chr7	45765267	45765381	-	45765267	45766330	A5SS	0.5	50	50	ENSMUST00000210655.2	ENSMUSG00000040136.11	Abcc8	chr7	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 8
chr7	45774305	45776191	-	45774305	45776209	A5SS	0.5	50	50	ENSMUST00000210655.2	ENSMUSG00000040136.11	Abcc8	chr7	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 8
chr7	45754185	45754325	-	45754185	45755233	A5SS	0.33	50	50	ENSMUST00000210770.2	ENSMUSG00000040136.11	Abcc8	chr7	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 8
chr7	45824905;45826304	45826066;45827866	-	45824905	45827866	cassetteExon	0.5	100	100	ENSMUST00000033123.8	ENSMUSG00000040136.11	Abcc8	chr7	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 8
chr7	45846675	45850398	-	45846675;45847886	45847777;45850398	ES	0.5	50	50	ENSMUST00000078680.13	ENSMUSG00000030838.21	Ush1c	chr7	protein_coding	USH1 protein network component harmonin
chr7	45851098	45868723	-	45851098;45865503	45865442;45868723	ES	0.33	50	50	ENSMUST00000078680.13	ENSMUSG00000030838.21	Ush1c	chr7	protein_coding	USH1 protein network component harmonin
chr7	45870959	45871273	-	45870959;45871121	45871065;45871273	ES	0.5	50	50	ENSMUST00000078680.13	ENSMUSG00000030838.21	Ush1c	chr7	protein_coding	USH1 protein network component harmonin
chr7	45872326	45874608	-	45872326;45874356	45874262;45874608	ES	0.5	50	50	ENSMUST00000078680.13	ENSMUSG00000030838.21	Ush1c	chr7	protein_coding	USH1 protein network component harmonin
chr7	45874665	45874967	-	45874665;45874858	45874834;45874967	ES	0.5	50	50	ENSMUST00000078680.13	ENSMUSG00000030838.21	Ush1c	chr7	protein_coding	USH1 protein network component harmonin
chr7	45845158;45846221	45846128;45846620	-	45845158	45846620	cassetteExon	0.5	100	100	ENSMUST00000078680.13	ENSMUSG00000030838.21	Ush1c	chr7	protein_coding	USH1 protein network component harmonin
chr7	45845158;45846221	45846136;45846620	-	45845158	45846620	cassetteExon	0.5	100	100	ENSMUST00000078680.13	ENSMUSG00000030838.21	Ush1c	chr7	protein_coding	USH1 protein network component harmonin
chr7	45845158;45846244	45846128;45846620	-	45845158	45846620	cassetteExon	0.5	100	100	ENSMUST00000078680.13	ENSMUSG00000030838.21	Ush1c	chr7	protein_coding	USH1 protein network component harmonin
chr7	45845158;45846244	45846136;45846620	-	45845158	45846620	cassetteExon	0.5	100	100	ENSMUST00000078680.13	ENSMUSG00000030838.21	Ush1c	chr7	protein_coding	USH1 protein network component harmonin
chr7	45864404	45868723	-	45865503	45868723	A3SS&ES	0.33	50	50	ENSMUST00000078680.13	ENSMUSG00000030838.21	Ush1c	chr7	protein_coding	USH1 protein network component harmonin
chr7	45851098	45853554	-	45851098	45865442	A5SS	0.33	50	50	ENSMUST00000078680.13	ENSMUSG00000030838.21	Ush1c	chr7	protein_coding	USH1 protein network component harmonin
chr7	45868847	45869066	-	45868847	45869873	A5SS	0.5	50	50	ENSMUST00000078680.13	ENSMUSG00000030838.21	Ush1c	chr7	protein_coding	USH1 protein network component harmonin
chr7	45879555	45879899	-	45879555	45887853	A5SS	0.5	50	50	ENSMUST00000078680.13	ENSMUSG00000030838.21	Ush1c	chr7	protein_coding	USH1 protein network component harmonin
chr7	45851098;45865503	45865442;45868723	-	45851098;45864404	45853554;45868723	MXE	0.5	100	100	ENSMUST00000143155.8	ENSMUSG00000030838.21	Ush1c	chr7	protein_coding	USH1 protein network component harmonin
chr7	45846244	45846620	-	45846221	45846620	A3SS	0.33	50	50	ENSMUST00000143155.8	ENSMUSG00000030838.21	Ush1c	chr7	protein_coding	USH1 protein network component harmonin
chr7	45845158	45846128	-	45845158	45846136	A5SS	0.33	50	50	ENSMUST00000143155.8	ENSMUSG00000030838.21	Ush1c	chr7	protein_coding	USH1 protein network component harmonin
chr7	45864404	45868723	-	45851098	45868723	A3SS	0.33	50	50	ENSMUST00000148527.2	ENSMUSG00000030838.21	Ush1c	chr7	protein_coding	USH1 protein network component harmonin
chr7	45851098	45853554	-	45851098	45868723	A5SS	0.33	50	50	ENSMUST00000148527.2	ENSMUSG00000030838.21	Ush1c	chr7	protein_coding	USH1 protein network component harmonin
chr7	45944878	45945267	+	45940452	45945267	A5SS	0.5	50	50	ENSMUST00000164538.2	ENSMUSG00000009487.11	Otog	chr7	protein_coding	otogelin
chr7	45996761	45998060	-	45995668	45998060	A3SS	0.33	50	50	ENSMUST00000209655.2	ENSMUSG00000109962.2	1700025L06Rik	chr7	lncRNA	RIKEN cDNA 1700025L06 gene
chr7	45997769	45998060	-	45995668	45998060	A3SS	0.33	50	50	ENSMUST00000209655.2	ENSMUSG00000109962.2	1700025L06Rik	chr7	lncRNA	RIKEN cDNA 1700025L06 gene
chr7	45997769	45998060	-	45996761	45998060	A3SS	0.33	50	50	ENSMUST00000211477.2	ENSMUSG00000109962.2	1700025L06Rik	chr7	lncRNA	RIKEN cDNA 1700025L06 gene
chr7	46072179	46076770	+	46047671	46076770	A5SS	0.5	50	50	ENSMUST00000025202.8	ENSMUSG00000058975.8	Kcnc1	chr7	protein_coding	potassium voltage gated channel, Shaw-related subfamily, member 1
chr7	46162484	46165092	-	46092959	46165092	A3SS	0.5	50	50	ENSMUST00000033127.12	ENSMUSG00000030839.13	Sergef	chr7	protein_coding	secretion regulating guanine nucleotide exchange factor
chr7	46092959	46161379	-	46092959	46165092	A5SS	0.5	50	50	ENSMUST00000033127.12	ENSMUSG00000030839.13	Sergef	chr7	protein_coding	secretion regulating guanine nucleotide exchange factor
chr7	46240197	46252524	-	46240197	46264042	A5SS	0.5	50	50	ENSMUST00000033127.12	ENSMUSG00000030839.13	Sergef	chr7	protein_coding	secretion regulating guanine nucleotide exchange factor
chr7	46284980	46288685	-	46284980	46289137	A5SS	0.33	50	50	ENSMUST00000033127.12	ENSMUSG00000030839.13	Sergef	chr7	protein_coding	secretion regulating guanine nucleotide exchange factor
chr7	46284980	46288699	-	46284980	46289137	A5SS	0.33	50	50	ENSMUST00000033127.12	ENSMUSG00000030839.13	Sergef	chr7	protein_coding	secretion regulating guanine nucleotide exchange factor
chr7	46092959	46165092	-	46092959;46162484	46161379;46165092	ES	0.5	50	50	ENSMUST00000216505.2	ENSMUSG00000030839.13	Sergef	chr7	protein_coding	secretion regulating guanine nucleotide exchange factor
chr7	46284980	46288685	-	46284980	46288699	A5SS	0.33	50	50	ENSMUST00000135035.2	ENSMUSG00000030839.13	Sergef	chr7	protein_coding	secretion regulating guanine nucleotide exchange factor
chr7	46300410	46303165	-	46300410;46302408	46302282;46303165	ES	0.5	50	50	ENSMUST00000049298.15	ENSMUSG00000040046.15	Tph1	chr7	protein_coding	tryptophan hydroxylase 1
chr7	46303300	46306632	-	46303300;46306480	46306284;46306632	ES	0.5	50	50	ENSMUST00000049298.15	ENSMUSG00000040046.15	Tph1	chr7	protein_coding	tryptophan hydroxylase 1
chr7	46309940	46311249	-	46309940	46311431	A5SS	0.5	50	50	ENSMUST00000049298.15	ENSMUSG00000040046.15	Tph1	chr7	protein_coding	tryptophan hydroxylase 1
chr7	46314732	46316687	-	46314732	46321536	A5SS	0.5	50	50	ENSMUST00000049298.15	ENSMUSG00000040046.15	Tph1	chr7	protein_coding	tryptophan hydroxylase 1
chr7	46303300	46306632	-	46306480	46306632	3pMXE	0.5	50	50	ENSMUST00000170045.2	ENSMUSG00000040046.15	Tph1	chr7	protein_coding	tryptophan hydroxylase 1
chr7	46349142;46349817	46349764;46351205	-	46349142	46351205	cassetteExon	0.5	100	100	ENSMUST00000143082.4	ENSMUSG00000006763.15	Saal1	chr7	protein_coding	serum amyloid A-like 1
chr7	46348971	46349060	-	46348976	46349060	A3SS	0.5	50	50	ENSMUST00000143082.4	ENSMUSG00000006763.15	Saal1	chr7	protein_coding	serum amyloid A-like 1
chr7	46351712	46351826	-	46351385	46351826	A3SS	0.5	50	50	ENSMUST00000143082.4	ENSMUSG00000006763.15	Saal1	chr7	protein_coding	serum amyloid A-like 1
chr7	46351916	46352045	-	46351941	46352045	A3SS	0.5	50	50	ENSMUST00000143082.4	ENSMUSG00000006763.15	Saal1	chr7	protein_coding	serum amyloid A-like 1
chr7	46362151	46363085	-	46362151	46364434	A5SS	0.5	50	50	ENSMUST00000006956.9	ENSMUSG00000040026.9	Saa3	chr7	protein_coding	serum amyloid A 3
chr7	46401288	46402842	+	46401288;46401805	46401711;46402842	ES	0.5	50	50	ENSMUST00000210769.2	ENSMUSG00000057465.6	Saa2	chr7	protein_coding	serum amyloid A 2
chr7	46401288	46401714	+	46401288	46401711	A3SS	0.33	50	50	ENSMUST00000210769.2	ENSMUSG00000057465.6	Saa2	chr7	protein_coding	serum amyloid A 2
chr7	46401288;46401805	46401714;46402842	+	46401288	46402842	cassetteExon	0.5	100	100	ENSMUST00000210272.2	ENSMUSG00000057465.6	Saa2	chr7	protein_coding	serum amyloid A 2
chr7	46412637	46416518	-	46412637;46414349	46414243;46416518	ES	0.5	50	50	ENSMUST00000142663.8	ENSMUSG00000014418.17	Hps5	chr7	protein_coding	HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
chr7	46414349	46417457	-	46414349;46416631	46416518;46417457	ES	0.33	50	50	ENSMUST00000142663.8	ENSMUSG00000014418.17	Hps5	chr7	protein_coding	HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
chr7	46417576	46418717	-	46417576;46418516	46418361;46418717	ES	0.5	50	50	ENSMUST00000142663.8	ENSMUSG00000014418.17	Hps5	chr7	protein_coding	HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
chr7	46421605	46422544	-	46421605;46421967	46421896;46422544	ES	0.5	50	50	ENSMUST00000142663.8	ENSMUSG00000014418.17	Hps5	chr7	protein_coding	HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
chr7	46424361	46425189	-	46424361;46424708	46424578;46425189	ES	0.5	50	50	ENSMUST00000142663.8	ENSMUSG00000014418.17	Hps5	chr7	protein_coding	HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
chr7	46438416	46440341	-	46438416;46438623	46438513;46440341	ES	0.5	50	50	ENSMUST00000142663.8	ENSMUSG00000014418.17	Hps5	chr7	protein_coding	HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
chr7	46440496	46445331	-	46440496	46444852	5pMXE	0.5	50	50	ENSMUST00000142663.8	ENSMUSG00000014418.17	Hps5	chr7	protein_coding	HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
chr7	46416563	46417457	-	46416631	46417457	A3SS	0.33	50	50	ENSMUST00000142663.8	ENSMUSG00000014418.17	Hps5	chr7	protein_coding	HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
chr7	46427524	46428496	-	46427623	46428496	A3SS	0.5	50	50	ENSMUST00000142663.8	ENSMUSG00000014418.17	Hps5	chr7	protein_coding	HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
chr7	46433141	46435934	-	46433107	46435934	A3SS	0.5	50	50	ENSMUST00000142663.8	ENSMUSG00000014418.17	Hps5	chr7	protein_coding	HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
chr7	46440472	46444852	-	46440496	46444852	A3SS	0.5	50	50	ENSMUST00000142663.8	ENSMUSG00000014418.17	Hps5	chr7	protein_coding	HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
chr7	46421967	46422582	-	46421967	46422544	A5SS	0.5	50	50	ENSMUST00000142663.8	ENSMUSG00000014418.17	Hps5	chr7	protein_coding	HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
chr7	46440496	46445331	-	46440472	46445331	A3SS	0.5	50	50	ENSMUST00000107654.8	ENSMUSG00000014418.17	Hps5	chr7	protein_coding	HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
chr7	46440472	46444852	-	46440472	46445331	A5SS	0.5	50	50	ENSMUST00000107654.8	ENSMUSG00000014418.17	Hps5	chr7	protein_coding	HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
chr7	46421605	46422544	-	46421605	46421896	A5SS&ES	0.5	50	50	ENSMUST00000211347.2	ENSMUSG00000014418.17	Hps5	chr7	protein_coding	HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
chr7	46414349	46417457	-	46414349;46416563	46416518;46417457	ES	0.33	50	50	ENSMUST00000138480.2	ENSMUSG00000014418.17	Hps5	chr7	protein_coding	HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
chr7	46417576	46418717	-	46417576	46418361	5pMXE	0.5	50	50	ENSMUST00000138480.2	ENSMUSG00000014418.17	Hps5	chr7	protein_coding	HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
chr7	46412637;46414349	46414243;46417457	-	46412637;46416631	46416518;46417457	MXE	0.5	100	100	ENSMUST00000211571.2	ENSMUSG00000014418.17	Hps5	chr7	protein_coding	HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
chr7	46412637;46416563	46416518;46417457	-	46412637;46414349	46414243;46417457	MXE	0.5	100	100	ENSMUST00000153789.8	ENSMUSG00000014418.17	Hps5	chr7	protein_coding	HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
chr7	46412637	46416518	-	46414349	46416518	3pMXE	0.5	50	50	ENSMUST00000130365.2	ENSMUSG00000014418.17	Hps5	chr7	protein_coding	HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
chr7	46414349	46417457	-	46416631	46417457	3pMXE	0.33	50	50	ENSMUST00000143627.2	ENSMUSG00000014418.17	Hps5	chr7	protein_coding	HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
chr7	46451264	46454385	+	46451264;46453433	46453241;46454385	ES	0.5	50	50	ENSMUST00000006774.11	ENSMUSG00000006599.14	Gtf2h1	chr7	protein_coding	general transcription factor II H, polypeptide 1
chr7	46445712;46446889	46446821;46451096	+	46445712	46451096	cassetteExon	0.5	100	100	ENSMUST00000006774.11	ENSMUSG00000006599.14	Gtf2h1	chr7	protein_coding	general transcription factor II H, polypeptide 1
chr7	46446187	46446821	+	46445712	46446821	A5SS	0.5	50	50	ENSMUST00000165031.8	ENSMUSG00000006599.14	Gtf2h1	chr7	protein_coding	general transcription factor II H, polypeptide 1
chr7	46500482	46503407	+	46500482	46501301	3pMXE	0.5	50	50	ENSMUST00000147535.8	ENSMUSG00000063229.16	Ldha	chr7	protein_coding	lactate dehydrogenase A
chr7	46497169	46498448	+	46497169	46498397	A3SS	0.5	50	50	ENSMUST00000147535.8	ENSMUSG00000063229.16	Ldha	chr7	protein_coding	lactate dehydrogenase A
chr7	46498514	46499628	+	46498514	46499602	A3SS	0.33	50	50	ENSMUST00000147535.8	ENSMUSG00000063229.16	Ldha	chr7	protein_coding	lactate dehydrogenase A
chr7	46495341	46497020	+	46491076	46497020	A5SS	0.2	50	50	ENSMUST00000147535.8	ENSMUSG00000063229.16	Ldha	chr7	protein_coding	lactate dehydrogenase A
chr7	46495870	46497020	+	46491076	46497020	A5SS	0.2	50	50	ENSMUST00000147535.8	ENSMUSG00000063229.16	Ldha	chr7	protein_coding	lactate dehydrogenase A
chr7	46496812	46497020	+	46491076	46497020	A5SS	0.2	50	50	ENSMUST00000147535.8	ENSMUSG00000063229.16	Ldha	chr7	protein_coding	lactate dehydrogenase A
chr7	46496920	46497020	+	46491076	46497020	A5SS	0.2	50	50	ENSMUST00000147535.8	ENSMUSG00000063229.16	Ldha	chr7	protein_coding	lactate dehydrogenase A
chr7	46500482	46503407	+	46500482;46501418	46501301;46503407	ES	0.5	50	50	ENSMUST00000048209.16	ENSMUSG00000063229.16	Ldha	chr7	protein_coding	lactate dehydrogenase A
chr7	46495341;46495870	46495726;46497020	+	46495341	46497020	cassetteExon	0.5	100	100	ENSMUST00000048209.16	ENSMUSG00000063229.16	Ldha	chr7	protein_coding	lactate dehydrogenase A
chr7	46495341;46496920	46496813;46497020	+	46495341	46497020	cassetteExon	0.5	100	100	ENSMUST00000048209.16	ENSMUSG00000063229.16	Ldha	chr7	protein_coding	lactate dehydrogenase A
chr7	46495341	46496963	+	46495341	46497020	A3SS	0.25	50	50	ENSMUST00000048209.16	ENSMUSG00000063229.16	Ldha	chr7	protein_coding	lactate dehydrogenase A
chr7	46496812	46497020	+	46495341	46497020	A5SS	0.2	50	50	ENSMUST00000048209.16	ENSMUSG00000063229.16	Ldha	chr7	protein_coding	lactate dehydrogenase A
chr7	46495341;46495870	46495726;46497020	+	46495341;46496920	46496813;46497020	MXE	0.5	100	100	ENSMUST00000125862.8	ENSMUSG00000063229.16	Ldha	chr7	protein_coding	lactate dehydrogenase A
chr7	46495341	46496963	+	46495341	46496813	A3SS&ES	0.25	50	50	ENSMUST00000125862.8	ENSMUSG00000063229.16	Ldha	chr7	protein_coding	lactate dehydrogenase A
chr7	46498514;46501418	46501301;46503407	+	46498514;46500482	46499602;46503407	MXE	0.5	100	100	ENSMUST00000209548.2	ENSMUSG00000063229.16	Ldha	chr7	protein_coding	lactate dehydrogenase A
chr7	46498514	46499602	+	46498514	46501301	A3SS	0.33	50	50	ENSMUST00000210968.2	ENSMUSG00000063229.16	Ldha	chr7	protein_coding	lactate dehydrogenase A
chr7	46498514	46499628	+	46498514	46501301	A3SS	0.33	50	50	ENSMUST00000210968.2	ENSMUSG00000063229.16	Ldha	chr7	protein_coding	lactate dehydrogenase A
chr7	46500482	46501301	+	46498514	46501301	A5SS	0.5	50	50	ENSMUST00000210968.2	ENSMUSG00000063229.16	Ldha	chr7	protein_coding	lactate dehydrogenase A
chr7	46495341	46496963	+	46495341	46495726	A3SS&ES	0.25	50	50	ENSMUST00000092621.12	ENSMUSG00000063229.16	Ldha	chr7	protein_coding	lactate dehydrogenase A
chr7	46496812	46497020	+	46495870	46497020	A5SS	0.25	50	50	ENSMUST00000092621.12	ENSMUSG00000063229.16	Ldha	chr7	protein_coding	lactate dehydrogenase A
chr7	46495341	46497020	+	46495870	46497020	5pMXE	0.2	50	50	ENSMUST00000133062.2	ENSMUSG00000063229.16	Ldha	chr7	protein_coding	lactate dehydrogenase A
chr7	46496920	46497020	+	46495870	46497020	A5SS	0.2	50	50	ENSMUST00000133062.2	ENSMUSG00000063229.16	Ldha	chr7	protein_coding	lactate dehydrogenase A
chr7	46496920	46497020	+	46496812	46497020	A5SS	0.2	50	50	ENSMUST00000209984.2	ENSMUSG00000063229.16	Ldha	chr7	protein_coding	lactate dehydrogenase A
chr7	46519196	46525100	+	46519196;46522509	46522336;46525100	ES	0.5	50	50	ENSMUST00000014545.11	ENSMUSG00000030851.16	Ldhc	chr7	protein_coding	lactate dehydrogenase C
chr7	46510800	46511187	+	46510725	46511187	A5SS	0.33	50	50	ENSMUST00000014545.11	ENSMUSG00000030851.16	Ldhc	chr7	protein_coding	lactate dehydrogenase C
chr7	46510985	46511187	+	46510725	46511187	A5SS	0.33	50	50	ENSMUST00000014545.11	ENSMUSG00000030851.16	Ldhc	chr7	protein_coding	lactate dehydrogenase C
chr7	46519196	46522336	+	46519196	46527137	A3SS	0.33	50	50	ENSMUST00000211784.2	ENSMUSG00000030851.16	Ldhc	chr7	protein_coding	lactate dehydrogenase C
chr7	46519196	46525100	+	46519196	46527137	A3SS	0.33	50	50	ENSMUST00000211784.2	ENSMUSG00000030851.16	Ldhc	chr7	protein_coding	lactate dehydrogenase C
chr7	46526021	46527137	+	46519196	46527137	A5SS	0.5	50	50	ENSMUST00000211784.2	ENSMUSG00000030851.16	Ldhc	chr7	protein_coding	lactate dehydrogenase C
chr7	46510985	46511187	+	46510800	46511187	A5SS	0.33	50	50	ENSMUST00000148565.8	ENSMUSG00000030851.16	Ldhc	chr7	protein_coding	lactate dehydrogenase C
chr7	46558816	46563126	-	46558816;46560558	46560493;46563126	ES	0.5	50	50	ENSMUST00000014546.15	ENSMUSG00000014402.16	Tsg101	chr7	protein_coding	tumor susceptibility gene 101
chr7	46560558	46569569	-	46560558;46563210	46563126;46569569	ES	0.5	50	50	ENSMUST00000014546.15	ENSMUSG00000014402.16	Tsg101	chr7	protein_coding	tumor susceptibility gene 101
chr7	46539452;46540451	46540339;46540670	-	46539452	46540670	cassetteExon	0.5	100	100	ENSMUST00000014546.15	ENSMUSG00000014402.16	Tsg101	chr7	protein_coding	tumor susceptibility gene 101
chr7	46558711	46560493	-	46558816	46560493	A3SS	0.33	50	50	ENSMUST00000014546.15	ENSMUSG00000014402.16	Tsg101	chr7	protein_coding	tumor susceptibility gene 101
chr7	46558739	46560493	-	46558816	46560493	A3SS	0.33	50	50	ENSMUST00000014546.15	ENSMUSG00000014402.16	Tsg101	chr7	protein_coding	tumor susceptibility gene 101
chr7	46563210	46563955	-	46563210	46569569	A5SS	0.5	50	50	ENSMUST00000014546.15	ENSMUSG00000014402.16	Tsg101	chr7	protein_coding	tumor susceptibility gene 101
chr7	46553336	46556799	-	46542308	46556799	A3SS	0.5	50	50	ENSMUST00000209538.2	ENSMUSG00000014402.16	Tsg101	chr7	protein_coding	tumor susceptibility gene 101
chr7	46542308	46550775	-	46542308	46556799	A5SS	0.5	50	50	ENSMUST00000209538.2	ENSMUSG00000014402.16	Tsg101	chr7	protein_coding	tumor susceptibility gene 101
chr7	46558816;46563210	46563126;46569569	-	46558816;46560558	46560493;46569569	MXE	0.5	100	100	ENSMUST00000156335.9	ENSMUSG00000014402.16	Tsg101	chr7	protein_coding	tumor susceptibility gene 101
chr7	46558711	46560493	-	46558739	46560493	A3SS	0.33	50	50	ENSMUST00000211076.2	ENSMUSG00000014402.16	Tsg101	chr7	protein_coding	tumor susceptibility gene 101
chr7	46558816	46563126	-	46560558	46563126	A3SS&ES	0.5	50	50	ENSMUST00000211076.2	ENSMUSG00000014402.16	Tsg101	chr7	protein_coding	tumor susceptibility gene 101
chr7	46597796	46604772	-	46597796;46600739	46600576;46604772	ES	0.5	50	50	ENSMUST00000094398.13	ENSMUSG00000043262.17	Uevld	chr7	protein_coding	UEV and lactate/malate dehyrogenase domains
chr7	46580800;46584788	46584631;46587639	-	46580800	46587639	cassetteExon	0.5	100	100	ENSMUST00000094398.13	ENSMUSG00000043262.17	Uevld	chr7	protein_coding	UEV and lactate/malate dehyrogenase domains
chr7	46604837;46605268	46605194;46605366	-	46604837	46605366	cassetteExon	0.5	100	100	ENSMUST00000094398.13	ENSMUSG00000043262.17	Uevld	chr7	protein_coding	UEV and lactate/malate dehyrogenase domains
chr7	46590025	46593536	-	46590051	46593536	A3SS	0.5	50	50	ENSMUST00000094398.13	ENSMUSG00000043262.17	Uevld	chr7	protein_coding	UEV and lactate/malate dehyrogenase domains
chr7	46618456	46620083	-	46618456;46619152	46618901;46620083	ES	0.5	50	50	ENSMUST00000209497.2	ENSMUSG00000110001.2	C86187	chr7	lncRNA	expressed sequence C86187
chr7	46619152	46624602	-	46619152;46620189	46620083;46624602	ES	0.33	50	50	ENSMUST00000209497.2	ENSMUSG00000110001.2	C86187	chr7	lncRNA	expressed sequence C86187
chr7	46618456;46619152	46618901;46624602	-	46618456	46624602	cassetteExon	0.5	100	100	ENSMUST00000210486.2	ENSMUSG00000110001.2	C86187	chr7	lncRNA	expressed sequence C86187
chr7	46618456;46620189	46620083;46624602	-	46618456	46624602	cassetteExon	0.5	100	100	ENSMUST00000210486.2	ENSMUSG00000110001.2	C86187	chr7	lncRNA	expressed sequence C86187
chr7	46618456;46620189	46620083;46624602	-	46618456;46619152	46618901;46624602	MXE	0.5	100	100	ENSMUST00000209331.2	ENSMUSG00000110001.2	C86187	chr7	lncRNA	expressed sequence C86187
chr7	46634121	46636757	+	46634130	46636757	A5SS	0.5	50	50	ENSMUST00000070660.11	ENSMUSG00000056509.11	Gm9999	chr7	protein_coding	predicted gene 9999
chr7	46658341	46658472	+	46658194	46658472	A5SS	0.5	50	50	ENSMUST00000208993.2	ENSMUSG00000109118.2	Gm32031	chr7	lncRNA	predicted gene, 32031
chr7	46701668	46702598	+	46700549	46702598	A5SS	0.5	50	50	ENSMUST00000010451.8	ENSMUSG00000010307.8	Tmem86a	chr7	protein_coding	transmembrane protein 86A
chr7	46762545;46782407	46782026;46783004	-	46762545	46783004	cassetteExon	0.5	100	100	ENSMUST00000102626.10	ENSMUSG00000030854.18	Ptpn5	chr7	protein_coding	protein tyrosine phosphatase, non-receptor type 5
chr7	46782854	46783004	-	46762545	46783004	A3SS	0.33	50	50	ENSMUST00000102626.10	ENSMUSG00000030854.18	Ptpn5	chr7	protein_coding	protein tyrosine phosphatase, non-receptor type 5
chr7	46741318	46762362	-	46741318	46762469	A5SS	0.5	50	50	ENSMUST00000102626.10	ENSMUSG00000030854.18	Ptpn5	chr7	protein_coding	protein tyrosine phosphatase, non-receptor type 5
chr7	46762545	46762878	-	46762545	46783004	A5SS	0.25	50	50	ENSMUST00000102626.10	ENSMUSG00000030854.18	Ptpn5	chr7	protein_coding	protein tyrosine phosphatase, non-receptor type 5
chr7	46762545	46781258	-	46762545	46783004	A5SS	0.25	50	50	ENSMUST00000102626.10	ENSMUSG00000030854.18	Ptpn5	chr7	protein_coding	protein tyrosine phosphatase, non-receptor type 5
chr7	46762545	46783004	-	46762545	46782026	5pMXE	0.25	50	50	ENSMUST00000209161.2	ENSMUSG00000030854.18	Ptpn5	chr7	protein_coding	protein tyrosine phosphatase, non-receptor type 5
chr7	46762545;46781308	46781258;46782026	-	46762545	46782026	cassetteExon	0.5	100	100	ENSMUST00000209161.2	ENSMUSG00000030854.18	Ptpn5	chr7	protein_coding	protein tyrosine phosphatase, non-receptor type 5
chr7	46762545	46762878	-	46762545	46782026	A5SS	0.25	50	50	ENSMUST00000209161.2	ENSMUSG00000030854.18	Ptpn5	chr7	protein_coding	protein tyrosine phosphatase, non-receptor type 5
chr7	46782854	46783004	-	46782407	46783004	A3SS	0.33	50	50	ENSMUST00000209179.2	ENSMUSG00000030854.18	Ptpn5	chr7	protein_coding	protein tyrosine phosphatase, non-receptor type 5
chr7	46762545	46762878	-	46762545	46781258	A5SS	0.25	50	50	ENSMUST00000209179.2	ENSMUSG00000030854.18	Ptpn5	chr7	protein_coding	protein tyrosine phosphatase, non-receptor type 5
chr7	46835721	46838407	-	46835721	46838406	A5SS	0.5	50	50	ENSMUST00000073793.5	ENSMUSG00000052303.7	Mrgpra6	chr7	protein_coding	MAS-related GPR, member A6
chr7	46885651	46902533	-	46885654	46902533	A3SS	0.5	50	50	ENSMUST00000179005.3	ENSMUSG00000074111.5	Mrgpra9	chr7	protein_coding	MAS-related GPR, member A9
chr7	47114719	47178542	-	47114719	47139236	5pMXE	0.5	50	50	ENSMUST00000119798.3	ENSMUSG00000096719.2	Mrgpra2b	chr7	protein_coding	MAS-related GPR, member A2B
chr7	48097020	48105945	-	48097899	48105945	A3SS	0.5	50	50	ENSMUST00000094384.4	ENSMUSG00000070547.5	Mrgprb1	chr7	protein_coding	MAS-related GPR, member B1
chr7	48097020;48097899	48097658;48105945	-	48097020	48105945	cassetteExon	0.5	100	100	ENSMUST00000188095.2	ENSMUSG00000070547.5	Mrgprb1	chr7	protein_coding	MAS-related GPR, member B1
chr7	48132805	48145749	-	48132805	48148899	A5SS	0.5	50	50	ENSMUST00000098433.5	ENSMUSG00000074109.5	Mrgprx2	chr7	protein_coding	MAS-related GPR, member X2
chr7	48438885	48449577	+	48438885;48445794	48445649;48449577	ES	0.5	50	50	ENSMUST00000118927.8	ENSMUSG00000030471.18	Zdhhc13	chr7	protein_coding	zinc finger, DHHC domain containing 13
chr7	48438885	48445654	+	48438885	48445649	A3SS	0.33	50	50	ENSMUST00000118927.8	ENSMUSG00000030471.18	Zdhhc13	chr7	protein_coding	zinc finger, DHHC domain containing 13
chr7	48438885;48445794	48445654;48449577	+	48438885	48449577	cassetteExon	0.5	100	100	ENSMUST00000125280.8	ENSMUSG00000030471.18	Zdhhc13	chr7	protein_coding	zinc finger, DHHC domain containing 13
chr7	48489306	48494829	-	48489306	48493344	5pMXE	0.33	50	50	ENSMUST00000167786.4	ENSMUSG00000030470.16	Csrp3	chr7	protein_coding	cysteine and glycine-rich protein 3
chr7	48489306	48497746	-	48489306	48493344	5pMXE	0.33	50	50	ENSMUST00000167786.4	ENSMUSG00000030470.16	Csrp3	chr7	protein_coding	cysteine and glycine-rich protein 3
chr7	48489306	48494829	-	48489306	48497746	A5SS	0.33	50	50	ENSMUST00000032658.14	ENSMUSG00000030470.16	Csrp3	chr7	protein_coding	cysteine and glycine-rich protein 3
chr7	48530149	48531156	-	48530149	48530409	5pMXE	0.5	50	50	ENSMUST00000058745.15	ENSMUSG00000046179.18	E2f8	chr7	protein_coding	E2F transcription factor 8
chr7	48527860	48528082	+	48527860	48528079	A3SS	0.5	50	50	ENSMUST00000129551.2	ENSMUSG00000085995.3	Gm2788	chr7	lncRNA	predicted gene 2788
chr7	48528195	48530381	+	48528195	48535185	A3SS	0.5	50	50	ENSMUST00000129551.2	ENSMUSG00000085995.3	Gm2788	chr7	lncRNA	predicted gene 2788
chr7	48531265	48535185	+	48528195	48535185	A5SS	0.33	50	50	ENSMUST00000129551.2	ENSMUSG00000085995.3	Gm2788	chr7	lncRNA	predicted gene 2788
chr7	48534871	48535185	+	48528195	48535185	A5SS	0.33	50	50	ENSMUST00000129551.2	ENSMUSG00000085995.3	Gm2788	chr7	lncRNA	predicted gene 2788
chr7	48559465	48597451	+	48559465	48559691	3pMXE	0.5	50	50	ENSMUST00000210463.2	ENSMUSG00000085995.3	Gm2788	chr7	lncRNA	predicted gene 2788
chr7	48527860	48528079	+	48527860	48548457	A3SS	0.33	50	50	ENSMUST00000210463.2	ENSMUSG00000085995.3	Gm2788	chr7	lncRNA	predicted gene 2788
chr7	48527860	48528082	+	48527860	48548457	A3SS	0.33	50	50	ENSMUST00000210463.2	ENSMUSG00000085995.3	Gm2788	chr7	lncRNA	predicted gene 2788
chr7	48537178	48548457	+	48527860	48548457	A5SS	0.5	50	50	ENSMUST00000210463.2	ENSMUSG00000085995.3	Gm2788	chr7	lncRNA	predicted gene 2788
chr7	48558493	48558877	+	48557746	48558877	A5SS	0.5	50	50	ENSMUST00000210463.2	ENSMUSG00000085995.3	Gm2788	chr7	lncRNA	predicted gene 2788
chr7	48548812	48555966	+	48548812	48557616	A3SS	0.5	50	50	ENSMUST00000209849.2	ENSMUSG00000085995.3	Gm2788	chr7	lncRNA	predicted gene 2788
chr7	48556469	48557616	+	48548812	48557616	A5SS	0.5	50	50	ENSMUST00000209849.2	ENSMUSG00000085995.3	Gm2788	chr7	lncRNA	predicted gene 2788
chr7	48531265	48535185	+	48534871	48535185	A5SS&ES	0.33	50	50	ENSMUST00000209288.2	ENSMUSG00000085995.3	Gm2788	chr7	lncRNA	predicted gene 2788
chr7	48608925	48613546	+	48597581	48613546	A5SS	0.5	50	50	ENSMUST00000184336.2	ENSMUSG00000052512.18	Nav2	chr7	protein_coding	neuron navigator 2
chr7	49058654;49062642	49062574;49069922	+	49058654	49069922	cassetteExon	0.5	100	100	ENSMUST00000183659.8	ENSMUSG00000052512.18	Nav2	chr7	protein_coding	neuron navigator 2
chr7	49070088	49086610	+	49070088	49102147	A3SS	0.5	50	50	ENSMUST00000183659.8	ENSMUSG00000052512.18	Nav2	chr7	protein_coding	neuron navigator 2
chr7	49107956	49111657	+	49107956	49111660	A3SS	0.5	50	50	ENSMUST00000183659.8	ENSMUSG00000052512.18	Nav2	chr7	protein_coding	neuron navigator 2
chr7	48896946	49011846	+	48614188	49011846	A5SS	0.25	50	50	ENSMUST00000183659.8	ENSMUSG00000052512.18	Nav2	chr7	protein_coding	neuron navigator 2
chr7	48896946	49022065	+	49011963	49022065	A5SS&ES	0.33	50	50	ENSMUST00000183659.8	ENSMUSG00000052512.18	Nav2	chr7	protein_coding	neuron navigator 2
chr7	48954306	49011846	+	48614188	49011846	A5SS	0.25	50	50	ENSMUST00000183659.8	ENSMUSG00000052512.18	Nav2	chr7	protein_coding	neuron navigator 2
chr7	48993376	49011846	+	48614188	49011846	A5SS	0.25	50	50	ENSMUST00000183659.8	ENSMUSG00000052512.18	Nav2	chr7	protein_coding	neuron navigator 2
chr7	49014881	49022065	+	49011963	49022065	A5SS	0.33	50	50	ENSMUST00000183659.8	ENSMUSG00000052512.18	Nav2	chr7	protein_coding	neuron navigator 2
chr7	49100631	49102147	+	49070088	49102147	A5SS	0.5	50	50	ENSMUST00000183659.8	ENSMUSG00000052512.18	Nav2	chr7	protein_coding	neuron navigator 2
chr7	48896946	49022065	+	48896946;49011963	49011846;49022065	ES	0.33	50	50	ENSMUST00000184809.8	ENSMUSG00000052512.18	Nav2	chr7	protein_coding	neuron navigator 2
chr7	48954306	49011846	+	48896946	49011846	A5SS	0.25	50	50	ENSMUST00000184809.8	ENSMUSG00000052512.18	Nav2	chr7	protein_coding	neuron navigator 2
chr7	48993376	49011846	+	48896946	49011846	A5SS	0.25	50	50	ENSMUST00000184809.8	ENSMUSG00000052512.18	Nav2	chr7	protein_coding	neuron navigator 2
chr7	49014881	49022065	+	48896946	49022065	A5SS	0.33	50	50	ENSMUST00000184124.8	ENSMUSG00000052512.18	Nav2	chr7	protein_coding	neuron navigator 2
chr7	48993376	49011846	+	48954306	49011846	A5SS	0.25	50	50	ENSMUST00000184928.8	ENSMUSG00000052512.18	Nav2	chr7	protein_coding	neuron navigator 2
chr7	49201797	49202588	+	49201797	49206658	A3SS	0.5	50	50	ENSMUST00000184109.2	ENSMUSG00000052512.18	Nav2	chr7	protein_coding	neuron navigator 2
chr7	49204007	49206658	+	49201797	49206658	A5SS	0.5	50	50	ENSMUST00000184109.2	ENSMUSG00000052512.18	Nav2	chr7	protein_coding	neuron navigator 2
chr7	48773811	48809120	-	48773811	48783865	5pMXE	0.5	50	50	ENSMUST00000208636.2	ENSMUSG00000108950.2	9130015G15Rik	chr7	lncRNA	RIKEN cDNA 9130015G15 gene
chr7	49409059	49409290	+	49408893	49409290	A5SS	0.5	50	50	ENSMUST00000208048.2	ENSMUSG00000039745.9	Htatip2	chr7	protein_coding	HIV-1 Tat interactive protein 2
chr7	49409059	49409346	+	49409059	49409290	A3SS	0.5	50	50	ENSMUST00000085272.7	ENSMUSG00000039745.9	Htatip2	chr7	protein_coding	HIV-1 Tat interactive protein 2
chr7	49430139	49430259	+	49430139	49430869	A3SS	0.5	50	50	ENSMUST00000140656.8	ENSMUSG00000030505.18	Prmt3	chr7	protein_coding	protein arginine N-methyltransferase 3
chr7	49429659	49430057	+	49428461	49430057	A5SS	0.5	50	50	ENSMUST00000140656.8	ENSMUSG00000030505.18	Prmt3	chr7	protein_coding	protein arginine N-methyltransferase 3
chr7	49430091	49430869	+	49430139	49430869	A5SS	0.5	50	50	ENSMUST00000140656.8	ENSMUSG00000030505.18	Prmt3	chr7	protein_coding	protein arginine N-methyltransferase 3
chr7	49561991	49566977	+	49561991;49564598	49564460;49566977	ES	0.5	50	50	ENSMUST00000056442.12	ENSMUSG00000039728.16	Slc6a5	chr7	protein_coding	solute carrier family 6 (neurotransmitter transporter, glycine), member 5
chr7	49560653	49561449	+	49560129	49561449	A5SS	0.5	50	50	ENSMUST00000056442.12	ENSMUSG00000039728.16	Slc6a5	chr7	protein_coding	solute carrier family 6 (neurotransmitter transporter, glycine), member 5
chr7	49870084	49878540	+	49870084	49929266	A3SS	0.5	50	50	ENSMUST00000151721.8	ENSMUSG00000055409.15	Nell1	chr7	protein_coding	NEL-like 1
chr7	49748321	49770278	+	49712516	49770278	A5SS	0.5	50	50	ENSMUST00000151721.8	ENSMUSG00000055409.15	Nell1	chr7	protein_coding	NEL-like 1
chr7	49908013	49929266	+	49870084	49929266	A5SS	0.5	50	50	ENSMUST00000151721.8	ENSMUSG00000055409.15	Nell1	chr7	protein_coding	NEL-like 1
chr7	50350999	50498231	+	50350999;50476148	50476008;50498231	ES	0.5	50	50	ENSMUST00000081872.13	ENSMUSG00000055409.15	Nell1	chr7	protein_coding	NEL-like 1
chr7	50198964	50225587	-	50212685	50225587	A3SS&ES	0.5	50	50	ENSMUST00000134584.2	ENSMUSG00000085265.2	Nell1os	chr7	lncRNA	NEL-like 1, opposite strand
chr7	50212685	50223717	-	50212685	50225587	A5SS	0.5	50	50	ENSMUST00000134584.2	ENSMUSG00000085265.2	Nell1os	chr7	lncRNA	NEL-like 1, opposite strand
chr7	51175999	51187470	+	51175999;51185237	51185196;51187470	ES	0.5	50	50	ENSMUST00000043944.6	ENSMUSG00000055489.9	Ano5	chr7	protein_coding	anoctamin 5
chr7	51237564	51243372	+	51237564;51240416	51240311;51243372	ES	0.5	50	50	ENSMUST00000043944.6	ENSMUSG00000055489.9	Ano5	chr7	protein_coding	anoctamin 5
chr7	51168608;51169215	51169181;51175946	+	51168608	51175946	cassetteExon	0.5	100	100	ENSMUST00000043944.6	ENSMUSG00000055489.9	Ano5	chr7	protein_coding	anoctamin 5
chr7	51224648	51226360	+	51224648	51226252	A3SS	0.5	50	50	ENSMUST00000043944.6	ENSMUSG00000055489.9	Ano5	chr7	protein_coding	anoctamin 5
chr7	51294867	51298900	+	51294867;51296022	51295935;51298900	ES	0.5	50	50	ENSMUST00000032710.7	ENSMUSG00000030500.7	Slc17a6	chr7	protein_coding	solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
chr7	51279301	51294753	+	51276710	51294753	A5SS	0.5	50	50	ENSMUST00000032710.7	ENSMUSG00000030500.7	Slc17a6	chr7	protein_coding	solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
chr7	51298990	51308426	+	51298986	51308426	A5SS	0.5	50	50	ENSMUST00000032710.7	ENSMUSG00000030500.7	Slc17a6	chr7	protein_coding	solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
chr7	51294867	51298900	+	51294867	51295935	3pMXE	0.5	50	50	ENSMUST00000207375.2	ENSMUSG00000030500.7	Slc17a6	chr7	protein_coding	solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
chr7	51537824	51546999	+	51537824;51546266	51546055;51546999	ES	0.5	50	50	ENSMUST00000129604.8	ENSMUSG00000030498.16	Gas2	chr7	protein_coding	growth arrest specific 2
chr7	51576292;51581174	51581112;51586302	+	51576292	51586302	cassetteExon	0.5	100	100	ENSMUST00000129604.8	ENSMUSG00000030498.16	Gas2	chr7	protein_coding	growth arrest specific 2
chr7	51603049	51606125	+	51603049	51643039	A3SS	0.33	50	50	ENSMUST00000129604.8	ENSMUSG00000030498.16	Gas2	chr7	protein_coding	growth arrest specific 2
chr7	51603049	51615025	+	51603049	51643039	A3SS	0.33	50	50	ENSMUST00000129604.8	ENSMUSG00000030498.16	Gas2	chr7	protein_coding	growth arrest specific 2
chr7	51513841	51514030	+	51512192	51514030	A5SS	0.5	50	50	ENSMUST00000129604.8	ENSMUSG00000030498.16	Gas2	chr7	protein_coding	growth arrest specific 2
chr7	51528989	51537660	+	51514117	51537660	A5SS	0.25	50	50	ENSMUST00000129604.8	ENSMUSG00000030498.16	Gas2	chr7	protein_coding	growth arrest specific 2
chr7	51529118	51537660	+	51514117	51537660	A5SS	0.25	50	50	ENSMUST00000129604.8	ENSMUSG00000030498.16	Gas2	chr7	protein_coding	growth arrest specific 2
chr7	51530258	51537660	+	51514117	51537660	A5SS	0.25	50	50	ENSMUST00000129604.8	ENSMUSG00000030498.16	Gas2	chr7	protein_coding	growth arrest specific 2
chr7	51603049	51606125	+	51603049	51615025	A3SS	0.33	50	50	ENSMUST00000107589.8	ENSMUSG00000030498.16	Gas2	chr7	protein_coding	growth arrest specific 2
chr7	51529118	51537660	+	51528989	51537660	A5SS	0.25	50	50	ENSMUST00000051912.13	ENSMUSG00000030498.16	Gas2	chr7	protein_coding	growth arrest specific 2
chr7	51530258	51537660	+	51528989	51537660	A5SS	0.25	50	50	ENSMUST00000051912.13	ENSMUSG00000030498.16	Gas2	chr7	protein_coding	growth arrest specific 2
chr7	51530258	51537660	+	51529118	51537660	A5SS	0.25	50	50	ENSMUST00000107591.9	ENSMUSG00000030498.16	Gas2	chr7	protein_coding	growth arrest specific 2
chr7	51653733	51655291	-	51653733	51655486	A5SS	0.5	50	50	ENSMUST00000098414.5	ENSMUSG00000074093.5	Svip	chr7	protein_coding	small VCP/p97-interacting protein
chr7	51661586	51664604	-	51661586;51663334	51663230;51664604	ES	0.33	50	50	ENSMUST00000180038.8	ENSMUSG00000094445.8	1700015G11Rik	chr7	protein_coding	RIKEN cDNA 1700015G11 gene
chr7	51663295	51664604	-	51663334	51664604	A3SS	0.33	50	50	ENSMUST00000180038.8	ENSMUSG00000094445.8	1700015G11Rik	chr7	protein_coding	RIKEN cDNA 1700015G11 gene
chr7	51663334	51664608	-	51663334	51664604	A5SS	0.5	50	50	ENSMUST00000180038.8	ENSMUSG00000094445.8	1700015G11Rik	chr7	protein_coding	RIKEN cDNA 1700015G11 gene
chr7	51661586	51664604	-	51661586	51663230	A5SS&ES	0.5	50	50	ENSMUST00000185758.2	ENSMUSG00000094445.8	1700015G11Rik	chr7	protein_coding	RIKEN cDNA 1700015G11 gene
chr7	51661586;51663295	51663230;51664604	-	51661586	51664604	cassetteExon	0.5	100	100	ENSMUST00000190307.7	ENSMUSG00000094445.8	1700015G11Rik	chr7	protein_coding	RIKEN cDNA 1700015G11 gene
chr7	55418469	55419080	+	55418469;55418855	55418635;55419080	ES	0.33	50	50	ENSMUST00000172988.8	ENSMUSG00000051504.19	Siglech	chr7	protein_coding	sialic acid binding Ig-like lectin H
chr7	55418118	55418408	+	55418118	55418219	A3SS	0.5	50	50	ENSMUST00000172988.8	ENSMUSG00000051504.19	Siglech	chr7	protein_coding	sialic acid binding Ig-like lectin H
chr7	55421444	55422254	+	55421444	55422250	A3SS	0.5	50	50	ENSMUST00000172988.8	ENSMUSG00000051504.19	Siglech	chr7	protein_coding	sialic acid binding Ig-like lectin H
chr7	55418913	55419080	+	55418855	55419080	A5SS	0.33	50	50	ENSMUST00000172988.8	ENSMUSG00000051504.19	Siglech	chr7	protein_coding	sialic acid binding Ig-like lectin H
chr7	55418913	55421351	+	55419127	55421351	A5SS&ES	0.5	50	50	ENSMUST00000172988.8	ENSMUSG00000051504.19	Siglech	chr7	protein_coding	sialic acid binding Ig-like lectin H
chr7	55418469;55418913	55418635;55419080	+	55418469	55419080	cassetteExon	0.5	100	100	ENSMUST00000121492.8	ENSMUSG00000051504.19	Siglech	chr7	protein_coding	sialic acid binding Ig-like lectin H
chr7	55418469;55418913	55418635;55421351	+	55418469;55419127	55419080;55421351	MXE	0.5	100	100	ENSMUST00000121492.8	ENSMUSG00000051504.19	Siglech	chr7	protein_coding	sialic acid binding Ig-like lectin H
chr7	55418913	55421351	+	55418913;55419127	55419080;55421351	ES	0.5	50	50	ENSMUST00000171077.8	ENSMUSG00000051504.19	Siglech	chr7	protein_coding	sialic acid binding Ig-like lectin H
chr7	55444088	55445787	+	55444088;55445699	55445646;55445787	ES	0.5	50	50	ENSMUST00000032627.5	ENSMUSG00000033790.12	Tubgcp5	chr7	protein_coding	tubulin, gamma complex associated protein 5
chr7	55466404	55468462	+	55466404;55467175	55466987;55468462	ES	0.5	50	50	ENSMUST00000032627.5	ENSMUSG00000033790.12	Tubgcp5	chr7	protein_coding	tubulin, gamma complex associated protein 5
chr7	55476069;55478844	55478766;55479079	+	55476069	55479079	cassetteExon	0.5	100	100	ENSMUST00000032627.5	ENSMUSG00000033790.12	Tubgcp5	chr7	protein_coding	tubulin, gamma complex associated protein 5
chr7	55450445	55454329	+	55450512	55454329	A5SS	0.5	50	50	ENSMUST00000032627.5	ENSMUSG00000033790.12	Tubgcp5	chr7	protein_coding	tubulin, gamma complex associated protein 5
chr7	55466404	55468462	+	55466404	55466987	3pMXE	0.5	50	50	ENSMUST00000205779.2	ENSMUSG00000033790.12	Tubgcp5	chr7	protein_coding	tubulin, gamma complex associated protein 5
chr7	55466404	55468462	+	55467175	55468462	5pMXE	0.5	50	50	ENSMUST00000205718.2	ENSMUSG00000033790.12	Tubgcp5	chr7	protein_coding	tubulin, gamma complex associated protein 5
chr7	55521724	55523194	+	55521724;55521904	55521815;55523194	ES	0.5	50	50	ENSMUST00000168271.9	ENSMUSG00000030447.16	Cyfip1	chr7	protein_coding	cytoplasmic FMR1 interacting protein 1
chr7	55523271	55524655	+	55523271;55523506	55523405;55524655	ES	0.5	50	50	ENSMUST00000168271.9	ENSMUSG00000030447.16	Cyfip1	chr7	protein_coding	cytoplasmic FMR1 interacting protein 1
chr7	55492055	55521607	+	55491814	55521607	A5SS	0.33	50	50	ENSMUST00000168271.9	ENSMUSG00000030447.16	Cyfip1	chr7	protein_coding	cytoplasmic FMR1 interacting protein 1
chr7	55503802	55521607	+	55491814	55521607	A5SS	0.33	50	50	ENSMUST00000168271.9	ENSMUSG00000030447.16	Cyfip1	chr7	protein_coding	cytoplasmic FMR1 interacting protein 1
chr7	55492055;55503802	55503750;55521607	+	55492055	55521607	cassetteExon	0.5	100	100	ENSMUST00000032629.16	ENSMUSG00000030447.16	Cyfip1	chr7	protein_coding	cytoplasmic FMR1 interacting protein 1
chr7	55546563;55547720	55547573;55547986	+	55546563	55547986	cassetteExon	0.5	100	100	ENSMUST00000032629.16	ENSMUSG00000030447.16	Cyfip1	chr7	protein_coding	cytoplasmic FMR1 interacting protein 1
chr7	55546563;55547720	55547573;55549663	+	55546563;55548139	55547986;55549663	MXE	0.5	100	100	ENSMUST00000032629.16	ENSMUSG00000030447.16	Cyfip1	chr7	protein_coding	cytoplasmic FMR1 interacting protein 1
chr7	55547720;55548139	55547986;55549663	+	55547720	55549663	cassetteExon	0.5	100	100	ENSMUST00000085255.11	ENSMUSG00000030447.16	Cyfip1	chr7	protein_coding	cytoplasmic FMR1 interacting protein 1
chr7	55546563	55547986	+	55547720	55547986	5pMXE	0.5	50	50	ENSMUST00000173384.2	ENSMUSG00000030447.16	Cyfip1	chr7	protein_coding	cytoplasmic FMR1 interacting protein 1
chr7	55587410	55594229	-	55587410;55592784	55592728;55594229	ES	0.5	50	50	ENSMUST00000119041.8	ENSMUSG00000030452.17	Nipa2	chr7	protein_coding	non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)
chr7	55611320	55612144	-	55611320	55611935	5pMXE	0.25	50	50	ENSMUST00000119041.8	ENSMUSG00000030452.17	Nipa2	chr7	protein_coding	non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)
chr7	55594457;55594833	55594707;55611200	-	55594457	55611200	cassetteExon	0.5	100	100	ENSMUST00000119041.8	ENSMUSG00000030452.17	Nipa2	chr7	protein_coding	non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)
chr7	55587410	55611948	-	55587410	55592728	A5SS&ES	0.33	50	50	ENSMUST00000119041.8	ENSMUSG00000030452.17	Nipa2	chr7	protein_coding	non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)
chr7	55594457	55611948	-	55594457	55611200	A5SS&ES	0.33	50	50	ENSMUST00000119041.8	ENSMUSG00000030452.17	Nipa2	chr7	protein_coding	non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)
chr7	55611320	55611712	-	55611320	55611935	A5SS	0.25	50	50	ENSMUST00000119041.8	ENSMUSG00000030452.17	Nipa2	chr7	protein_coding	non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)
chr7	55611320	55611948	-	55611320	55611935	A5SS	0.25	50	50	ENSMUST00000119041.8	ENSMUSG00000030452.17	Nipa2	chr7	protein_coding	non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)
chr7	55594457;55611320	55611200;55611948	-	55594457	55611948	cassetteExon	0.5	100	100	ENSMUST00000117812.8	ENSMUSG00000030452.17	Nipa2	chr7	protein_coding	non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)
chr7	55594457	55594707	-	55594457	55611948	A5SS	0.33	50	50	ENSMUST00000117812.8	ENSMUSG00000030452.17	Nipa2	chr7	protein_coding	non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)
chr7	55611320	55611712	-	55611320	55611948	A5SS	0.25	50	50	ENSMUST00000032635.14	ENSMUSG00000030452.17	Nipa2	chr7	protein_coding	non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)
chr7	55611320	55612144	-	55611320	55611948	A5SS	0.25	50	50	ENSMUST00000032635.14	ENSMUSG00000030452.17	Nipa2	chr7	protein_coding	non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)
chr7	55587410;55594457	55594229;55611948	-	55587410	55611948	cassetteExon	0.5	100	100	ENSMUST00000147950.8	ENSMUSG00000030452.17	Nipa2	chr7	protein_coding	non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)
chr7	55611320	55611948	-	55587410	55611948	A3SS	0.33	50	50	ENSMUST00000147950.8	ENSMUSG00000030452.17	Nipa2	chr7	protein_coding	non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)
chr7	55611320	55611712	-	55611320	55612144	A5SS	0.25	50	50	ENSMUST00000126604.8	ENSMUSG00000030452.17	Nipa2	chr7	protein_coding	non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)
chr7	55587410	55594229	-	55592784	55594229	3pMXE	0.5	50	50	ENSMUST00000135849.8	ENSMUSG00000030452.17	Nipa2	chr7	protein_coding	non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)
chr7	55621909	55625440	+	55621909	55622652	3pMXE	0.5	50	50	ENSMUST00000149506.8	ENSMUSG00000087178.8	A230056P14Rik	chr7	lncRNA	RIKEN cDNA A230056P14 gene
chr7	55700050	55700604	+	55700277	55700604	A5SS	0.33	50	50	ENSMUST00000205653.2	ENSMUSG00000030451.17	Herc2	chr7	protein_coding	HECT and RLD domain containing E3 ubiquitin protein ligase 2
chr7	55700234	55700604	+	55700277	55700604	A5SS	0.33	50	50	ENSMUST00000205653.2	ENSMUSG00000030451.17	Herc2	chr7	protein_coding	HECT and RLD domain containing E3 ubiquitin protein ligase 2
chr7	55813882	55814886	+	55813882;55814771	55814663;55814886	ES	0.5	50	50	ENSMUST00000076226.13	ENSMUSG00000030451.17	Herc2	chr7	protein_coding	HECT and RLD domain containing E3 ubiquitin protein ligase 2
chr7	55846957	55853524	+	55846957;55851956	55851849;55853524	ES	0.5	50	50	ENSMUST00000076226.13	ENSMUSG00000030451.17	Herc2	chr7	protein_coding	HECT and RLD domain containing E3 ubiquitin protein ligase 2
chr7	55700234	55700604	+	55700050	55700604	A5SS	0.33	50	50	ENSMUST00000076226.13	ENSMUSG00000030451.17	Herc2	chr7	protein_coding	HECT and RLD domain containing E3 ubiquitin protein ligase 2
chr7	55872741	55876267	+	55872741	55880608	A3SS	0.5	50	50	ENSMUST00000205678.2	ENSMUSG00000030451.17	Herc2	chr7	protein_coding	HECT and RLD domain containing E3 ubiquitin protein ligase 2
chr7	55879621	55880608	+	55872741	55880608	A5SS	0.5	50	50	ENSMUST00000205678.2	ENSMUSG00000030451.17	Herc2	chr7	protein_coding	HECT and RLD domain containing E3 ubiquitin protein ligase 2
chr7	55945268	55964483	+	55945268;55947001	55946848;55964483	ES	0.33	50	50	ENSMUST00000032633.12	ENSMUSG00000030450.12	Oca2	chr7	protein_coding	oculocutaneous albinism II
chr7	55889629;55900456	55900320;55904517	+	55889629	55904517	cassetteExon	0.5	100	100	ENSMUST00000032633.12	ENSMUSG00000030450.12	Oca2	chr7	protein_coding	oculocutaneous albinism II
chr7	55927187;55929544	55929250;55930499	+	55927187	55930499	cassetteExon	0.5	100	100	ENSMUST00000032633.12	ENSMUSG00000030450.12	Oca2	chr7	protein_coding	oculocutaneous albinism II
chr7	55889629	55904521	+	55889629	55904517	A3SS	0.33	50	50	ENSMUST00000032633.12	ENSMUSG00000030450.12	Oca2	chr7	protein_coding	oculocutaneous albinism II
chr7	55956382	55964483	+	55947001	55964483	A5SS	0.33	50	50	ENSMUST00000032633.12	ENSMUSG00000030450.12	Oca2	chr7	protein_coding	oculocutaneous albinism II
chr7	55889629	55904521	+	55889629	55900320	A3SS&ES	0.33	50	50	ENSMUST00000155533.2	ENSMUSG00000030450.12	Oca2	chr7	protein_coding	oculocutaneous albinism II
chr7	55956382	55964483	+	55945268	55964483	A5SS	0.33	50	50	ENSMUST00000152693.8	ENSMUSG00000030450.12	Oca2	chr7	protein_coding	oculocutaneous albinism II
chr7	56829485	56973396	-	56634911	56973396	A3SS	0.5	50	50	ENSMUST00000068911.13	ENSMUSG00000055026.14	Gabrg3	chr7	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3
chr7	57157886	57158246	-	57157886	57159488	A5SS	0.33	50	50	ENSMUST00000068456.8	ENSMUSG00000055078.8	Gabra5	chr7	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 5
chr7	57157886	57159752	-	57157886	57159488	A5SS	0.33	50	50	ENSMUST00000068456.8	ENSMUSG00000055078.8	Gabra5	chr7	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 5
chr7	57157886	57158246	-	57157886	57159752	A5SS	0.33	50	50	ENSMUST00000206734.2	ENSMUSG00000055078.8	Gabra5	chr7	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 5
chr7	57240396	57241229	+	57200725	57241229	A5SS	0.33	50	50	ENSMUST00000085240.11	ENSMUSG00000033676.14	Gabrb3	chr7	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit beta 3
chr7	57241103	57241229	+	57200725	57241229	A5SS	0.33	50	50	ENSMUST00000085240.11	ENSMUSG00000033676.14	Gabrb3	chr7	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit beta 3
chr7	57241103	57241229	+	57240396	57241229	A5SS	0.33	50	50	ENSMUST00000196198.5	ENSMUSG00000033676.14	Gabrb3	chr7	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit beta 3
chr7	57415392	57438614	+	57415392	57461802	A3SS	0.5	50	50	ENSMUST00000138350.2	ENSMUSG00000033676.14	Gabrb3	chr7	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit beta 3
chr7	57442377	57461802	+	57415392	57461802	A5SS	0.5	50	50	ENSMUST00000138350.2	ENSMUSG00000033676.14	Gabrb3	chr7	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit beta 3
chr7	58936007	58938154	+	58936007;58936780	58936616;58938154	ES	0.5	50	50	ENSMUST00000202945.4	ENSMUSG00000025326.13	Ube3a	chr7	protein_coding	ubiquitin protein ligase E3A
chr7	58936780	58938455	+	58936780;58938309	58938154;58938455	ES	0.5	50	50	ENSMUST00000202945.4	ENSMUSG00000025326.13	Ube3a	chr7	protein_coding	ubiquitin protein ligase E3A
chr7	58879019;58890781	58890715;58896921	+	58879019	58896921	cassetteExon	0.5	100	100	ENSMUST00000202945.4	ENSMUSG00000025326.13	Ube3a	chr7	protein_coding	ubiquitin protein ligase E3A
chr7	58879019;58893217	58893098;58896921	+	58879019	58896921	cassetteExon	0.5	100	100	ENSMUST00000202945.4	ENSMUSG00000025326.13	Ube3a	chr7	protein_coding	ubiquitin protein ligase E3A
chr7	58896965	58921891	+	58896965	58921695	A3SS	0.5	50	50	ENSMUST00000202945.4	ENSMUSG00000025326.13	Ube3a	chr7	protein_coding	ubiquitin protein ligase E3A
chr7	58949854	58953416	+	58938528	58953416	A5SS	0.5	50	50	ENSMUST00000107537.5	ENSMUSG00000025326.13	Ube3a	chr7	protein_coding	ubiquitin protein ligase E3A
chr7	58879019;58890781	58890715;58893098	+	58879019	58893098	cassetteExon	0.5	100	100	ENSMUST00000201794.4	ENSMUSG00000025326.13	Ube3a	chr7	protein_coding	ubiquitin protein ligase E3A
chr7	58879019;58890781	58890715;58896921	+	58879019;58893217	58893098;58896921	MXE	0.5	100	100	ENSMUST00000201794.4	ENSMUSG00000025326.13	Ube3a	chr7	protein_coding	ubiquitin protein ligase E3A
chr7	58879110	58893098	+	58879019	58893098	A5SS	0.33	50	50	ENSMUST00000201794.4	ENSMUSG00000025326.13	Ube3a	chr7	protein_coding	ubiquitin protein ligase E3A
chr7	58890781;58893217	58893098;58896921	+	58890781	58896921	cassetteExon	0.5	100	100	ENSMUST00000202440.4	ENSMUSG00000025326.13	Ube3a	chr7	protein_coding	ubiquitin protein ligase E3A
chr7	58879221	58890715	+	58879019	58890715	A5SS	0.33	50	50	ENSMUST00000202440.4	ENSMUSG00000025326.13	Ube3a	chr7	protein_coding	ubiquitin protein ligase E3A
chr7	58879430	58890715	+	58879019	58890715	A5SS	0.33	50	50	ENSMUST00000202440.4	ENSMUSG00000025326.13	Ube3a	chr7	protein_coding	ubiquitin protein ligase E3A
chr7	58879110	58893098	+	58890781	58893098	A5SS&ES	0.33	50	50	ENSMUST00000200758.4	ENSMUSG00000025326.13	Ube3a	chr7	protein_coding	ubiquitin protein ligase E3A
chr7	58890781	58896921	+	58893217	58896921	A5SS&ES	0.5	50	50	ENSMUST00000201409.4	ENSMUSG00000025326.13	Ube3a	chr7	protein_coding	ubiquitin protein ligase E3A
chr7	58879221	58890715	+	58879430	58890715	A5SS	0.33	50	50	ENSMUST00000207686.2	ENSMUSG00000025326.13	Ube3a	chr7	protein_coding	ubiquitin protein ligase E3A
chr7	58879019	58896921	+	58893217	58896921	5pMXE	0.33	50	50	ENSMUST00000200709.2	ENSMUSG00000025326.13	Ube3a	chr7	protein_coding	ubiquitin protein ligase E3A
chr7	58936007;58936780	58936616;58938455	+	58936007;58938309	58938154;58938455	MXE	0.5	100	100	ENSMUST00000202247.4	ENSMUSG00000025326.13	Ube3a	chr7	protein_coding	ubiquitin protein ligase E3A
chr7	59326232	59326366	-	59326232	59524478	A5SS	0.33	50	50	ENSMUST00000185693.7	ENSMUSG00000100826.7	Snhg14	chr7	lncRNA	small nucleolar RNA host gene 14
chr7	59326232	59328607	-	59326232	59524478	A5SS	0.33	50	50	ENSMUST00000185693.7	ENSMUSG00000100826.7	Snhg14	chr7	lncRNA	small nucleolar RNA host gene 14
chr7	59326232	59328607	-	59326232	59326366	5pMXE	0.33	50	50	ENSMUST00000191191.2	ENSMUSG00000100826.7	Snhg14	chr7	lncRNA	small nucleolar RNA host gene 14
chr7	59343463	59345842	-	59333830	59345842	A3SS	0.5	50	50	ENSMUST00000185815.2	ENSMUSG00000100826.7	Snhg14	chr7	lncRNA	small nucleolar RNA host gene 14
chr7	59605472	59618910	-	59605472;59606548	59606430;59618910	ES	0.5	50	50	ENSMUST00000189581.7	ENSMUSG00000100826.7	Snhg14	chr7	lncRNA	small nucleolar RNA host gene 14
chr7	59649161	59781998	-	59649161	59654784	5pMXE	0.5	50	50	ENSMUST00000189432.7	ENSMUSG00000000948.17	Gm38393	chr7	protein_coding	predicted gene, 38393
chr7	59630904	59632012	-	59623923	59632012	A3SS	0.5	50	50	ENSMUST00000189432.7	ENSMUSG00000000948.17	Gm38393	chr7	protein_coding	predicted gene, 38393
chr7	59633025	59633117	-	59632133	59633117	A3SS	0.5	50	50	ENSMUST00000189432.7	ENSMUSG00000000948.17	Gm38393	chr7	protein_coding	predicted gene, 38393
chr7	59645302	59649066	-	59634911	59649066	A3SS	0.5	50	50	ENSMUST00000189432.7	ENSMUSG00000000948.17	Gm38393	chr7	protein_coding	predicted gene, 38393
chr7	59623923	59630240	-	59623923	59632012	A5SS	0.5	50	50	ENSMUST00000189432.7	ENSMUSG00000000948.17	Gm38393	chr7	protein_coding	predicted gene, 38393
chr7	59632133	59632182	-	59632133	59633117	A5SS	0.5	50	50	ENSMUST00000189432.7	ENSMUSG00000000948.17	Gm38393	chr7	protein_coding	predicted gene, 38393
chr7	59634911	59635579	-	59634911	59649066	A5SS	0.5	50	50	ENSMUST00000189432.7	ENSMUSG00000000948.17	Gm38393	chr7	protein_coding	predicted gene, 38393
chr7	59623923	59632012	-	59623923;59630904	59630240;59632012	ES	0.5	50	50	ENSMUST00000179360.3	ENSMUSG00000000948.17	Gm38393	chr7	protein_coding	predicted gene, 38393
chr7	59638495	59645154	-	59632292	59645154	A3SS	0.5	50	50	ENSMUST00000179360.3	ENSMUSG00000000948.17	Gm38393	chr7	protein_coding	predicted gene, 38393
chr7	61185236	61195749	-	61185236	61254264	A5SS	0.5	50	50	ENSMUST00000209115.2	ENSMUSG00000109006.3	B230209E15Rik	chr7	lncRNA	RIKEN cDNA B230209E15 gene
chr7	61356600	61360647	-	61356600	61384994	A5SS	0.5	50	50	ENSMUST00000208953.2	ENSMUSG00000109394.3	A230057D06Rik	chr7	lncRNA	RIKEN cDNA A230057D06 gene
chr7	61360288	61360647	-	61356600	61360647	A3SS	0.5	50	50	ENSMUST00000231418.2	ENSMUSG00000109394.3	A230057D06Rik	chr7	lncRNA	RIKEN cDNA A230057D06 gene
chr7	61513730	61561111	-	61364492	61561111	A3SS	0.5	50	50	ENSMUST00000231418.2	ENSMUSG00000109394.3	A230057D06Rik	chr7	lncRNA	RIKEN cDNA A230057D06 gene
chr7	61563083	61563838	-	61563083	61563849	A5SS	0.5	50	50	ENSMUST00000231418.2	ENSMUSG00000109394.3	A230057D06Rik	chr7	lncRNA	RIKEN cDNA A230057D06 gene
chr7	61624838	61631744	-	61624838;61631516	61631425;61631744	ES	0.5	50	50	ENSMUST00000208822.2	ENSMUSG00000109321.2	A330076H08Rik	chr7	lncRNA	RIKEN cDNA A330076H08 gene
chr7	61767766	61768643	-	61767650	61768643	A3SS	0.5	50	50	ENSMUST00000208965.2	ENSMUSG00000045813.8	Gm9801	chr7	lncRNA	predicted gene 9801
chr7	62791543	62798331	-	62760224	62798331	A3SS	0.5	50	50	ENSMUST00000032738.7	ENSMUSG00000030525.9	Chrna7	chr7	protein_coding	cholinergic receptor, nicotinic, alpha polypeptide 7
chr7	63404494	63407058	+	63404494;63404748	63404664;63407058	ES	0.5	50	50	ENSMUST00000058476.14	ENSMUSG00000033510.15	Otud7a	chr7	protein_coding	OTU domain containing 7A
chr7	63265166	63267534	+	63265166	63299357	A3SS	0.5	50	50	ENSMUST00000058476.14	ENSMUSG00000033510.15	Otud7a	chr7	protein_coding	OTU domain containing 7A
chr7	63335299	63346762	+	63335299	63346759	A3SS	0.5	50	50	ENSMUST00000058476.14	ENSMUSG00000033510.15	Otud7a	chr7	protein_coding	OTU domain containing 7A
chr7	63378937	63379541	+	63378937	63379562	A3SS	0.5	50	50	ENSMUST00000058476.14	ENSMUSG00000033510.15	Otud7a	chr7	protein_coding	OTU domain containing 7A
chr7	63541545	63574418	-	63541545	63587715	A5SS	0.33	50	50	ENSMUST00000063694.10	ENSMUSG00000052040.11	Klf13	chr7	protein_coding	Kruppel-like factor 13
chr7	63541545	63585978	-	63541545	63587715	A5SS	0.33	50	50	ENSMUST00000063694.10	ENSMUSG00000052040.11	Klf13	chr7	protein_coding	Kruppel-like factor 13
chr7	63541545	63574418	-	63541545	63585978	A5SS	0.33	50	50	ENSMUST00000185175.2	ENSMUSG00000052040.11	Klf13	chr7	protein_coding	Kruppel-like factor 13
chr7	63547749	63547822	+	63546307	63547822	A5SS	0.5	50	50	ENSMUST00000183782.8	ENSMUSG00000098708.8	Gm27252	chr7	lncRNA	predicted gene 27252
chr7	63657598;63661529	63661397;63668580	+	63657598	63668580	cassetteExon	0.5	100	100	ENSMUST00000205726.2	ENSMUSG00000108393.2	Gm32633	chr7	lncRNA	predicted gene, 32633
chr7	63847104	63851635	+	63847104;63849106	63848911;63851635	ES	0.5	50	50	ENSMUST00000085222.12	ENSMUSG00000030523.19	Trpm1	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 1
chr7	63852878	63858024	+	63852878;63854341	63854170;63858024	ES	0.5	50	50	ENSMUST00000085222.12	ENSMUSG00000030523.19	Trpm1	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 1
chr7	63860686	63868856	+	63860686;63867408	63867238;63868856	ES	0.5	50	50	ENSMUST00000085222.12	ENSMUSG00000030523.19	Trpm1	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 1
chr7	63884828	63887404	+	63884828;63885625	63885494;63887404	ES	0.5	50	50	ENSMUST00000085222.12	ENSMUSG00000030523.19	Trpm1	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 1
chr7	63849106	63851585	+	63849106	63851635	A3SS	0.5	50	50	ENSMUST00000085222.12	ENSMUSG00000030523.19	Trpm1	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 1
chr7	63860686	63867305	+	63860686	63867238	A3SS	0.33	50	50	ENSMUST00000085222.12	ENSMUSG00000030523.19	Trpm1	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 1
chr7	63880033	63880785	+	63880033	63884706	A3SS	0.5	50	50	ENSMUST00000085222.12	ENSMUSG00000030523.19	Trpm1	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 1
chr7	63835371	63847025	+	63803854	63847025	A5SS	0.25	50	50	ENSMUST00000085222.12	ENSMUSG00000030523.19	Trpm1	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 1
chr7	63836220	63847025	+	63803854	63847025	A5SS	0.25	50	50	ENSMUST00000085222.12	ENSMUSG00000030523.19	Trpm1	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 1
chr7	63836220	63848911	+	63847104	63848911	A5SS&ES	0.5	50	50	ENSMUST00000085222.12	ENSMUSG00000030523.19	Trpm1	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 1
chr7	63844582	63847025	+	63803854	63847025	A5SS	0.25	50	50	ENSMUST00000085222.12	ENSMUSG00000030523.19	Trpm1	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 1
chr7	63893363	63894598	+	63893345	63894598	A5SS	0.5	50	50	ENSMUST00000085222.12	ENSMUSG00000030523.19	Trpm1	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 1
chr7	63895024	63895692	+	63894618	63895692	A5SS	0.33	50	50	ENSMUST00000085222.12	ENSMUSG00000030523.19	Trpm1	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 1
chr7	63860686	63868856	+	63860686;63867408	63867305;63868856	ES	0.5	50	50	ENSMUST00000205348.2	ENSMUSG00000030523.19	Trpm1	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 1
chr7	63851848	63852754	+	63851848	63895692	A3SS	0.5	50	50	ENSMUST00000206314.2	ENSMUSG00000030523.19	Trpm1	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 1
chr7	63894618	63895692	+	63851848	63895692	A5SS	0.33	50	50	ENSMUST00000206314.2	ENSMUSG00000030523.19	Trpm1	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 1
chr7	63895024	63895692	+	63851848	63895692	A5SS	0.33	50	50	ENSMUST00000206314.2	ENSMUSG00000030523.19	Trpm1	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 1
chr7	63835371;63836220	63836135;63847025	+	63835371	63847025	cassetteExon	0.5	100	100	ENSMUST00000205960.2	ENSMUSG00000030523.19	Trpm1	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 1
chr7	63835371;63836220	63836135;63848911	+	63835371;63847104	63847025;63848911	MXE	0.5	100	100	ENSMUST00000205960.2	ENSMUSG00000030523.19	Trpm1	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 1
chr7	63835371;63844582	63844360;63847025	+	63835371	63847025	cassetteExon	0.5	100	100	ENSMUST00000205960.2	ENSMUSG00000030523.19	Trpm1	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 1
chr7	63836220;63847104	63847025;63848911	+	63836220	63848911	cassetteExon	0.5	100	100	ENSMUST00000205728.2	ENSMUSG00000030523.19	Trpm1	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 1
chr7	63835371	63844360	+	63835371	63836135	A3SS&ES	0.33	50	50	ENSMUST00000205728.2	ENSMUSG00000030523.19	Trpm1	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 1
chr7	63835371;63836220	63836135;63847025	+	63835371;63844582	63844360;63847025	MXE	0.5	100	100	ENSMUST00000206107.2	ENSMUSG00000030523.19	Trpm1	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 1
chr7	63835371;63836220	63836135;63848911	+	63835371;63847104	63844360;63848911	MXE	0.5	100	100	ENSMUST00000206107.2	ENSMUSG00000030523.19	Trpm1	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 1
chr7	63860686	63868856	+	63860686	63867238	3pMXE	0.33	50	50	ENSMUST00000205731.2	ENSMUSG00000030523.19	Trpm1	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 1
chr7	63852878	63858024	+	63852878	63854170	A3SS&ES	0.5	50	50	ENSMUST00000206453.2	ENSMUSG00000030523.19	Trpm1	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 1
chr7	63854341	63858024	+	63854341	63859705	A3SS	0.5	50	50	ENSMUST00000206453.2	ENSMUSG00000030523.19	Trpm1	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 1
chr7	63858740	63859705	+	63854341	63859705	A5SS	0.5	50	50	ENSMUST00000206453.2	ENSMUSG00000030523.19	Trpm1	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 1
chr7	63950430	63963832	+	63950430;63957966	63957876;63963832	ES	0.33	50	50	ENSMUST00000032736.11	ENSMUSG00000030522.15	Mtmr10	chr7	protein_coding	myotubularin related protein 10
chr7	63957966;63959928	63959768;63963832	+	63957966	63963832	cassetteExon	0.5	100	100	ENSMUST00000032736.11	ENSMUSG00000030522.15	Mtmr10	chr7	protein_coding	myotubularin related protein 10
chr7	63959928	63963832	+	63950430	63963832	A5SS	0.33	50	50	ENSMUST00000206680.2	ENSMUSG00000030522.15	Mtmr10	chr7	protein_coding	myotubularin related protein 10
chr7	64042591	64049917	+	64042591	64048441	3pMXE	0.33	50	50	ENSMUST00000206138.2	ENSMUSG00000033429.11	Mcee	chr7	protein_coding	methylmalonyl CoA epimerase
chr7	64042591	64061583	+	64042591	64048441	3pMXE	0.33	50	50	ENSMUST00000206138.2	ENSMUSG00000033429.11	Mcee	chr7	protein_coding	methylmalonyl CoA epimerase
chr7	64042591	64061583	+	64042591;64050254	64049917;64061583	ES	0.33	50	50	ENSMUST00000037205.11	ENSMUSG00000033429.11	Mcee	chr7	protein_coding	methylmalonyl CoA epimerase
chr7	64050092	64061583	+	64050254	64061583	A5SS	0.33	50	50	ENSMUST00000037205.11	ENSMUSG00000033429.11	Mcee	chr7	protein_coding	methylmalonyl CoA epimerase
chr7	64042591;64050092	64049917;64061583	+	64042591	64061583	cassetteExon	0.5	100	100	ENSMUST00000206882.2	ENSMUSG00000033429.11	Mcee	chr7	protein_coding	methylmalonyl CoA epimerase
chr7	64203519	64344772	+	64203519;64284832	64284779;64344772	ES	0.5	50	50	ENSMUST00000032732.15	ENSMUSG00000030519.15	Apba2	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family A, member 2
chr7	64383406	64386629	+	64383406;64384438	64384403;64386629	ES	0.5	50	50	ENSMUST00000032732.15	ENSMUSG00000030519.15	Apba2	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family A, member 2
chr7	64395565	64402819	+	64395565;64399991	64399851;64402819	ES	0.5	50	50	ENSMUST00000032732.15	ENSMUSG00000030519.15	Apba2	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family A, member 2
chr7	64152001	64203395	+	64151566	64203395	A5SS	0.5	50	50	ENSMUST00000032732.15	ENSMUSG00000030519.15	Apba2	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family A, member 2
chr7	64379219	64383261	+	64365295	64383261	A5SS	0.5	50	50	ENSMUST00000032732.15	ENSMUSG00000030519.15	Apba2	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family A, member 2
chr7	64393714	64394164	+	64393187	64394164	A5SS	0.5	50	50	ENSMUST00000032732.15	ENSMUSG00000030519.15	Apba2	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family A, member 2
chr7	64203519	64344772	+	64284832	64344772	5pMXE	0.5	50	50	ENSMUST00000206246.2	ENSMUSG00000030519.15	Apba2	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family A, member 2
chr7	64469647	64633129	-	64469647;64505967	64505857;64633129	ES	0.5	50	50	ENSMUST00000119118.8	ENSMUSG00000030518.18	Fam189a1	chr7	protein_coding	family with sequence similarity 189, member A1
chr7	64417475	64423164	-	64417475	64425452	A5SS	0.5	50	50	ENSMUST00000119118.8	ENSMUSG00000030518.18	Fam189a1	chr7	protein_coding	family with sequence similarity 189, member A1
chr7	64505967	64575222	-	64505967	64633129	A5SS	0.5	50	50	ENSMUST00000119118.8	ENSMUSG00000030518.18	Fam189a1	chr7	protein_coding	family with sequence similarity 189, member A1
chr7	64469647	64633129	-	64469647	64505857	5pMXE	0.5	50	50	ENSMUST00000144535.2	ENSMUSG00000030518.18	Fam189a1	chr7	protein_coding	family with sequence similarity 189, member A1
chr7	64963172	64964407	-	64963172;64964080	64963841;64964407	ES	0.5	50	50	ENSMUST00000102592.10	ENSMUSG00000030516.15	Tjp1	chr7	protein_coding	tight junction protein 1
chr7	65004636	65162947	-	65004636	65020558	5pMXE	0.5	50	50	ENSMUST00000102592.10	ENSMUSG00000030516.15	Tjp1	chr7	protein_coding	tight junction protein 1
chr7	64947415	64949418	-	64947415	64949478	A5SS	0.33	50	50	ENSMUST00000102592.10	ENSMUSG00000030516.15	Tjp1	chr7	protein_coding	tight junction protein 1
chr7	64947415	64949457	-	64947415	64949478	A5SS	0.33	50	50	ENSMUST00000102592.10	ENSMUSG00000030516.15	Tjp1	chr7	protein_coding	tight junction protein 1
chr7	64951031	64951881	-	64951031	64952492	A5SS	0.5	50	50	ENSMUST00000102592.10	ENSMUSG00000030516.15	Tjp1	chr7	protein_coding	tight junction protein 1
chr7	64947415	64949457	-	64947415	64949418	A5SS	0.33	50	50	ENSMUST00000032729.8	ENSMUSG00000030516.15	Tjp1	chr7	protein_coding	tight junction protein 1
chr7	65336290	65339716	+	65336290;65338699	65338627;65339716	ES	0.5	50	50	ENSMUST00000032728.9	ENSMUSG00000030515.10	Tarsl2	chr7	protein_coding	threonyl-tRNA synthetase-like 2
chr7	65343317	65344891	+	65343317;65343691	65343599;65344891	ES	0.5	50	50	ENSMUST00000065574.9	ENSMUSG00000078681.11	Tm2d3	chr7	protein_coding	TM2 domain containing 3
chr7	65343317	65343614	+	65343317	65343599	A3SS	0.16	50	50	ENSMUST00000065574.9	ENSMUSG00000078681.11	Tm2d3	chr7	protein_coding	TM2 domain containing 3
chr7	65343317	65344918	+	65343317	65343599	A3SS&ES	0.16	50	50	ENSMUST00000065574.9	ENSMUSG00000078681.11	Tm2d3	chr7	protein_coding	TM2 domain containing 3
chr7	65343317	65344922	+	65343317	65343599	A3SS&ES	0.16	50	50	ENSMUST00000065574.9	ENSMUSG00000078681.11	Tm2d3	chr7	protein_coding	TM2 domain containing 3
chr7	65343691	65344918	+	65343691	65344891	A3SS	0.5	50	50	ENSMUST00000065574.9	ENSMUSG00000078681.11	Tm2d3	chr7	protein_coding	TM2 domain containing 3
chr7	65343317	65347444	+	65343317;65345075	65344891;65347444	ES	0.5	50	50	ENSMUST00000032726.14	ENSMUSG00000078681.11	Tm2d3	chr7	protein_coding	TM2 domain containing 3
chr7	65343317;65343691	65343614;65344891	+	65343317	65344891	cassetteExon	0.5	100	100	ENSMUST00000032726.14	ENSMUSG00000078681.11	Tm2d3	chr7	protein_coding	TM2 domain containing 3
chr7	65343317	65344918	+	65343317	65344891	A3SS	0.16	50	50	ENSMUST00000032726.14	ENSMUSG00000078681.11	Tm2d3	chr7	protein_coding	TM2 domain containing 3
chr7	65343317	65344922	+	65343317	65344891	A3SS	0.16	50	50	ENSMUST00000032726.14	ENSMUSG00000078681.11	Tm2d3	chr7	protein_coding	TM2 domain containing 3
chr7	65343317	65347444	+	65343317;65345075	65344918;65347444	ES	0.5	50	50	ENSMUST00000143508.3	ENSMUSG00000078681.11	Tm2d3	chr7	protein_coding	TM2 domain containing 3
chr7	65343317;65343691	65343599;65344918	+	65343317	65344918	cassetteExon	0.5	100	100	ENSMUST00000143508.3	ENSMUSG00000078681.11	Tm2d3	chr7	protein_coding	TM2 domain containing 3
chr7	65343317;65343691	65343614;65344918	+	65343317	65344918	cassetteExon	0.5	100	100	ENSMUST00000143508.3	ENSMUSG00000078681.11	Tm2d3	chr7	protein_coding	TM2 domain containing 3
chr7	65343317	65344922	+	65343317	65344918	A3SS	0.16	50	50	ENSMUST00000143508.3	ENSMUSG00000078681.11	Tm2d3	chr7	protein_coding	TM2 domain containing 3
chr7	65343317;65345075	65344922;65347444	+	65343317	65347444	cassetteExon	0.5	100	100	ENSMUST00000206934.2	ENSMUSG00000078681.11	Tm2d3	chr7	protein_coding	TM2 domain containing 3
chr7	65343317	65343599	+	65343317	65347444	A3SS	0.16	50	50	ENSMUST00000206934.2	ENSMUSG00000078681.11	Tm2d3	chr7	protein_coding	TM2 domain containing 3
chr7	65343317	65343614	+	65343317	65347444	A3SS	0.16	50	50	ENSMUST00000206934.2	ENSMUSG00000078681.11	Tm2d3	chr7	protein_coding	TM2 domain containing 3
chr7	65343317	65344891	+	65343317	65343599	A3SS&ES	0.16	50	50	ENSMUST00000206517.2	ENSMUSG00000078681.11	Tm2d3	chr7	protein_coding	TM2 domain containing 3
chr7	65343317	65344918	+	65343317	65343614	A3SS&ES	0.2	50	50	ENSMUST00000206837.2	ENSMUSG00000078681.11	Tm2d3	chr7	protein_coding	TM2 domain containing 3
chr7	65343317	65344922	+	65343317	65343614	A3SS&ES	0.2	50	50	ENSMUST00000206837.2	ENSMUSG00000078681.11	Tm2d3	chr7	protein_coding	TM2 domain containing 3
chr7	65343317	65344891	+	65343317	65343614	A3SS&ES	0.16	50	50	ENSMUST00000206628.2	ENSMUSG00000078681.11	Tm2d3	chr7	protein_coding	TM2 domain containing 3
chr7	65512191	65559950	+	65511514	65559950	A5SS	0.5	50	50	ENSMUST00000176199.8	ENSMUSG00000030513.15	Pcsk6	chr7	protein_coding	proprotein convertase subtilisin/kexin type 6
chr7	65675155	65681497	+	65675155;65675352	65675314;65681497	ES	0.5	50	50	ENSMUST00000055576.12	ENSMUSG00000030513.15	Pcsk6	chr7	protein_coding	proprotein convertase subtilisin/kexin type 6
chr7	65697417	65711872	+	65697417	65698654	3pMXE	0.5	50	50	ENSMUST00000055576.12	ENSMUSG00000030513.15	Pcsk6	chr7	protein_coding	proprotein convertase subtilisin/kexin type 6
chr7	65612752	65618716	+	65612752	65629895	A3SS	0.5	50	50	ENSMUST00000176209.2	ENSMUSG00000030513.15	Pcsk6	chr7	protein_coding	proprotein convertase subtilisin/kexin type 6
chr7	65620407	65629895	+	65612752	65629895	A5SS	0.5	50	50	ENSMUST00000176209.2	ENSMUSG00000030513.15	Pcsk6	chr7	protein_coding	proprotein convertase subtilisin/kexin type 6
chr7	65708835	65711872	+	65697417	65711872	A5SS	0.2	50	50	ENSMUST00000206065.2	ENSMUSG00000108793.2	Gm45213	chr7	protein_coding	predicted gene 45213
chr7	65710333	65711872	+	65697417	65711872	A5SS	0.2	50	50	ENSMUST00000206065.2	ENSMUSG00000108793.2	Gm45213	chr7	protein_coding	predicted gene 45213
chr7	65710440	65711872	+	65697417	65711872	A5SS	0.2	50	50	ENSMUST00000206065.2	ENSMUSG00000108793.2	Gm45213	chr7	protein_coding	predicted gene 45213
chr7	65710743	65711872	+	65697417	65711872	A5SS	0.2	50	50	ENSMUST00000206065.2	ENSMUSG00000108793.2	Gm45213	chr7	protein_coding	predicted gene 45213
chr7	65719274;65719946	65719867;65720338	+	65719274	65720338	cassetteExon	0.5	100	100	ENSMUST00000206150.2	ENSMUSG00000030512.14	Snrpa1	chr7	protein_coding	small nuclear ribonucleoprotein polypeptide A'
chr7	65710333	65711872	+	65708835	65711872	A5SS	0.2	50	50	ENSMUST00000206150.2	ENSMUSG00000030512.14	Snrpa1	chr7	protein_coding	small nuclear ribonucleoprotein polypeptide A'
chr7	65710440	65711872	+	65708835	65711872	A5SS	0.2	50	50	ENSMUST00000206150.2	ENSMUSG00000030512.14	Snrpa1	chr7	protein_coding	small nuclear ribonucleoprotein polypeptide A'
chr7	65710440	65718915	+	65713593	65718915	A5SS&ES	0.5	50	50	ENSMUST00000206150.2	ENSMUSG00000030512.14	Snrpa1	chr7	protein_coding	small nuclear ribonucleoprotein polypeptide A'
chr7	65710440	65719172	+	65718961	65719172	A5SS&ES	0.5	50	50	ENSMUST00000206150.2	ENSMUSG00000030512.14	Snrpa1	chr7	protein_coding	small nuclear ribonucleoprotein polypeptide A'
chr7	65710743	65711872	+	65708835	65711872	A5SS	0.2	50	50	ENSMUST00000206150.2	ENSMUSG00000030512.14	Snrpa1	chr7	protein_coding	small nuclear ribonucleoprotein polypeptide A'
chr7	65710440	65711872	+	65710333	65711872	A5SS	0.2	50	50	ENSMUST00000123157.8	ENSMUSG00000030512.14	Snrpa1	chr7	protein_coding	small nuclear ribonucleoprotein polypeptide A'
chr7	65710743	65711872	+	65710333	65711872	A5SS	0.2	50	50	ENSMUST00000123157.8	ENSMUSG00000030512.14	Snrpa1	chr7	protein_coding	small nuclear ribonucleoprotein polypeptide A'
chr7	65710743	65711872	+	65710440	65711872	A5SS	0.2	50	50	ENSMUST00000153609.8	ENSMUSG00000030512.14	Snrpa1	chr7	protein_coding	small nuclear ribonucleoprotein polypeptide A'
chr7	65710440;65718961	65718915;65719172	+	65710440	65719172	cassetteExon	0.5	100	100	ENSMUST00000206166.2	ENSMUSG00000030512.14	Snrpa1	chr7	protein_coding	small nuclear ribonucleoprotein polypeptide A'
chr7	65710440	65711872	+	65710440	65719172	A3SS	0.33	50	50	ENSMUST00000206166.2	ENSMUSG00000030512.14	Snrpa1	chr7	protein_coding	small nuclear ribonucleoprotein polypeptide A'
chr7	65710440	65711872	+	65710440	65718915	A3SS	0.33	50	50	ENSMUST00000206409.2	ENSMUSG00000030512.14	Snrpa1	chr7	protein_coding	small nuclear ribonucleoprotein polypeptide A'
chr7	65729566	65730080	+	65729537	65730080	A5SS	0.33	50	50	ENSMUST00000101801.8	ENSMUSG00000075701.11	Selenos	chr7	protein_coding	selenoprotein S
chr7	65729787	65730080	+	65729537	65730080	A5SS	0.33	50	50	ENSMUST00000101801.8	ENSMUSG00000075701.11	Selenos	chr7	protein_coding	selenoprotein S
chr7	65737016	65738515	+	65737019	65738515	A5SS	0.5	50	50	ENSMUST00000101801.8	ENSMUSG00000075701.11	Selenos	chr7	protein_coding	selenoprotein S
chr7	65729787	65730080	+	65729566	65730080	A5SS	0.33	50	50	ENSMUST00000205279.2	ENSMUSG00000075701.11	Selenos	chr7	protein_coding	selenoprotein S
chr7	65909841	65911486	-	65876689	65911486	A3SS	0.5	50	50	ENSMUST00000167705.8	ENSMUSG00000015133.18	Lrrk1	chr7	protein_coding	leucine-rich repeat kinase 1
chr7	65916356;65918965	65918820;65919486	-	65916356	65919486	cassetteExon	0.5	100	100	ENSMUST00000015277.14	ENSMUSG00000015133.18	Lrrk1	chr7	protein_coding	leucine-rich repeat kinase 1
chr7	65991754	65992510	-	65983034	65992510	A3SS	0.5	50	50	ENSMUST00000015277.14	ENSMUSG00000015133.18	Lrrk1	chr7	protein_coding	leucine-rich repeat kinase 1
chr7	65915289	65916208	-	65915289	65916239	A5SS	0.5	50	50	ENSMUST00000015277.14	ENSMUSG00000015133.18	Lrrk1	chr7	protein_coding	leucine-rich repeat kinase 1
chr7	65992673	65992761	-	65992673	66031200	A5SS	0.5	50	50	ENSMUST00000015277.14	ENSMUSG00000015133.18	Lrrk1	chr7	protein_coding	leucine-rich repeat kinase 1
chr7	66057651	66061250	-	66057651;66059027	66058914;66061250	ES	0.5	50	50	ENSMUST00000015278.15	ENSMUSG00000015134.16	Aldh1a3	chr7	protein_coding	aldehyde dehydrogenase family 1, subfamily A3
chr7	66072063	66075274	-	66072063	66077062	A5SS	0.33	50	50	ENSMUST00000015278.15	ENSMUSG00000015134.16	Aldh1a3	chr7	protein_coding	aldehyde dehydrogenase family 1, subfamily A3
chr7	66072063	66076178	-	66072063	66077062	A5SS	0.33	50	50	ENSMUST00000015278.15	ENSMUSG00000015134.16	Aldh1a3	chr7	protein_coding	aldehyde dehydrogenase family 1, subfamily A3
chr7	66057651	66061250	-	66059027	66061250	3pMXE	0.5	50	50	ENSMUST00000174209.8	ENSMUSG00000015134.16	Aldh1a3	chr7	protein_coding	aldehyde dehydrogenase family 1, subfamily A3
chr7	66072063	66075274	-	66072063	66076178	A5SS	0.33	50	50	ENSMUST00000174209.8	ENSMUSG00000015134.16	Aldh1a3	chr7	protein_coding	aldehyde dehydrogenase family 1, subfamily A3
chr7	66310003	66328828	-	66310003;66327993	66327905;66328828	ES	0.5	50	50	ENSMUST00000131320.8	ENSMUSG00000030509.18	Asb7	chr7	protein_coding	ankyrin repeat and SOCS box-containing 7
chr7	66331556;66337706	66337632;66338571	-	66331556	66338571	cassetteExon	0.5	100	100	ENSMUST00000131320.8	ENSMUSG00000030509.18	Asb7	chr7	protein_coding	ankyrin repeat and SOCS box-containing 7
chr7	66297673	66304537	-	66297673	66309398	A5SS	0.5	50	50	ENSMUST00000131320.8	ENSMUSG00000030509.18	Asb7	chr7	protein_coding	ankyrin repeat and SOCS box-containing 7
chr7	66310003	66328828	-	66327993	66328828	3pMXE	0.5	50	50	ENSMUST00000068980.4	ENSMUSG00000030509.18	Asb7	chr7	protein_coding	ankyrin repeat and SOCS box-containing 7
chr7	66339771;66346054	66345924;66357788	+	66339771	66357788	cassetteExon	0.5	100	100	ENSMUST00000153007.2	ENSMUSG00000053091.17	Lins1	chr7	protein_coding	lines homolog 1
chr7	66356872	66357788	+	66339771	66357788	A5SS	0.33	50	50	ENSMUST00000153007.2	ENSMUSG00000053091.17	Lins1	chr7	protein_coding	lines homolog 1
chr7	66346054;66356872	66356773;66357788	+	66346054	66357788	cassetteExon	0.5	100	100	ENSMUST00000121777.9	ENSMUSG00000053091.17	Lins1	chr7	protein_coding	lines homolog 1
chr7	66346054	66355550	+	66346054	66357788	A3SS	0.33	50	50	ENSMUST00000121777.9	ENSMUSG00000053091.17	Lins1	chr7	protein_coding	lines homolog 1
chr7	66359183	66359978	+	66359183	66359907	A3SS	0.5	50	50	ENSMUST00000121777.9	ENSMUSG00000053091.17	Lins1	chr7	protein_coding	lines homolog 1
chr7	66360494	66361677	+	66360494	66361621	A3SS	0.5	50	50	ENSMUST00000121777.9	ENSMUSG00000053091.17	Lins1	chr7	protein_coding	lines homolog 1
chr7	66358208	66358387	+	66358301	66358387	A5SS	0.5	50	50	ENSMUST00000121777.9	ENSMUSG00000053091.17	Lins1	chr7	protein_coding	lines homolog 1
chr7	66358208	66359042	+	66358491	66359042	A5SS&ES	0.33	50	50	ENSMUST00000121777.9	ENSMUSG00000053091.17	Lins1	chr7	protein_coding	lines homolog 1
chr7	66358476	66359042	+	66358491	66359042	A5SS	0.33	50	50	ENSMUST00000121777.9	ENSMUSG00000053091.17	Lins1	chr7	protein_coding	lines homolog 1
chr7	66346054;66355602	66355550;66356773	+	66346054	66356773	cassetteExon	0.5	100	100	ENSMUST00000150071.8	ENSMUSG00000053091.17	Lins1	chr7	protein_coding	lines homolog 1
chr7	66358208	66359042	+	66358476	66359042	A5SS&ES	0.33	50	50	ENSMUST00000128486.8	ENSMUSG00000053091.17	Lins1	chr7	protein_coding	lines homolog 1
chr7	66358208	66359042	+	66358208;66358476	66358387;66359042	ES	0.33	50	50	ENSMUST00000132351.8	ENSMUSG00000053091.17	Lins1	chr7	protein_coding	lines homolog 1
chr7	66358208;66358491	66358387;66359042	+	66358208	66359042	cassetteExon	0.5	100	100	ENSMUST00000153773.2	ENSMUSG00000053091.17	Lins1	chr7	protein_coding	lines homolog 1
chr7	66499620	66538049	+	66499620;66529338	66529219;66538049	ES	0.5	50	50	ENSMUST00000156396.8	ENSMUSG00000058145.17	Adamts17	chr7	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17
chr7	66499620	66521481	+	66499620	66529219	A3SS	0.33	50	50	ENSMUST00000156396.8	ENSMUSG00000058145.17	Adamts17	chr7	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17
chr7	66492104	66499455	+	66490366	66499455	A5SS	0.5	50	50	ENSMUST00000156396.8	ENSMUSG00000058145.17	Adamts17	chr7	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17
chr7	66499620	66521481	+	66499620	66538049	A3SS	0.33	50	50	ENSMUST00000148538.8	ENSMUSG00000058145.17	Adamts17	chr7	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17
chr7	66618662	66618959	+	66618662	66652206	A3SS	0.5	50	50	ENSMUST00000148538.8	ENSMUSG00000058145.17	Adamts17	chr7	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17
chr7	66701785	66720337	+	66701785;66711894	66711814;66720337	ES	0.5	50	50	ENSMUST00000098382.10	ENSMUSG00000058145.17	Adamts17	chr7	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17
chr7	66701785	66720337	+	66701785	66711814	3pMXE	0.5	50	50	ENSMUST00000147880.8	ENSMUSG00000058145.17	Adamts17	chr7	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17
chr7	66872377;66872786	66872724;66873357	+	66872377	66873357	cassetteExon	0.5	100	100	ENSMUST00000208512.2	ENSMUSG00000043831.13	Lysmd4	chr7	protein_coding	LysM, putative peptidoglycan-binding, domain containing 4
chr7	66873639	66874124	+	66873639	66891367	A3SS	0.2	50	50	ENSMUST00000208512.2	ENSMUSG00000043831.13	Lysmd4	chr7	protein_coding	LysM, putative peptidoglycan-binding, domain containing 4
chr7	66873639	66874774	+	66873639	66891367	A3SS	0.2	50	50	ENSMUST00000208512.2	ENSMUSG00000043831.13	Lysmd4	chr7	protein_coding	LysM, putative peptidoglycan-binding, domain containing 4
chr7	66873639	66875612	+	66873639	66891367	A3SS	0.2	50	50	ENSMUST00000208512.2	ENSMUSG00000043831.13	Lysmd4	chr7	protein_coding	LysM, putative peptidoglycan-binding, domain containing 4
chr7	66873639	66884675	+	66873639	66891367	A3SS	0.2	50	50	ENSMUST00000208512.2	ENSMUSG00000043831.13	Lysmd4	chr7	protein_coding	LysM, putative peptidoglycan-binding, domain containing 4
chr7	66873639	66875612	+	66873639;66874907	66874774;66875612	ES	0.33	50	50	ENSMUST00000208213.2	ENSMUSG00000043831.13	Lysmd4	chr7	protein_coding	LysM, putative peptidoglycan-binding, domain containing 4
chr7	66873639;66874149	66874124;66874774	+	66873639	66874774	cassetteExon	0.5	100	100	ENSMUST00000208213.2	ENSMUSG00000043831.13	Lysmd4	chr7	protein_coding	LysM, putative peptidoglycan-binding, domain containing 4
chr7	66873639;66874149	66874124;66875612	+	66873639;66874907	66874774;66875612	MXE	0.5	100	100	ENSMUST00000208213.2	ENSMUSG00000043831.13	Lysmd4	chr7	protein_coding	LysM, putative peptidoglycan-binding, domain containing 4
chr7	66873639	66874774	+	66873639	66874124	3pMXE	0.2	50	50	ENSMUST00000207757.2	ENSMUSG00000043831.13	Lysmd4	chr7	protein_coding	LysM, putative peptidoglycan-binding, domain containing 4
chr7	66873639	66875612	+	66873639	66874124	3pMXE	0.2	50	50	ENSMUST00000207757.2	ENSMUSG00000043831.13	Lysmd4	chr7	protein_coding	LysM, putative peptidoglycan-binding, domain containing 4
chr7	66873639	66884675	+	66873639	66874124	3pMXE	0.2	50	50	ENSMUST00000207757.2	ENSMUSG00000043831.13	Lysmd4	chr7	protein_coding	LysM, putative peptidoglycan-binding, domain containing 4
chr7	66873639	66884675	+	66873639	66875612	3pMXE	0.2	50	50	ENSMUST00000058771.13	ENSMUSG00000043831.13	Lysmd4	chr7	protein_coding	LysM, putative peptidoglycan-binding, domain containing 4
chr7	66873639;66874149	66874124;66875612	+	66873639	66875612	cassetteExon	0.5	100	100	ENSMUST00000058771.13	ENSMUSG00000043831.13	Lysmd4	chr7	protein_coding	LysM, putative peptidoglycan-binding, domain containing 4
chr7	66874149	66875612	+	66874149	66874774	A3SS	0.5	50	50	ENSMUST00000207823.2	ENSMUSG00000043831.13	Lysmd4	chr7	protein_coding	LysM, putative peptidoglycan-binding, domain containing 4
chr7	66872377	66873357	+	66872786	66873357	A5SS	0.5	50	50	ENSMUST00000208998.2	ENSMUSG00000043831.13	Lysmd4	chr7	protein_coding	LysM, putative peptidoglycan-binding, domain containing 4
chr7	66874149;66874907	66874774;66875612	+	66874149	66875612	cassetteExon	0.5	100	100	ENSMUST00000179106.3	ENSMUSG00000043831.13	Lysmd4	chr7	protein_coding	LysM, putative peptidoglycan-binding, domain containing 4
chr7	66873639	66874774	+	66873639	66884675	A3SS	0.2	50	50	ENSMUST00000208569.2	ENSMUSG00000043831.13	Lysmd4	chr7	protein_coding	LysM, putative peptidoglycan-binding, domain containing 4
chr7	66890188	66901405	-	66890188;66894292	66894269;66901405	ES	0.5	50	50	ENSMUST00000156690.8	ENSMUSG00000030557.18	Mef2a	chr7	protein_coding	myocyte enhancer factor 2A
chr7	66915910;66917952	66917815;66945123	-	66915910;66918148	66918017;66945123	MXE	0.5	100	100	ENSMUST00000156690.8	ENSMUSG00000030557.18	Mef2a	chr7	protein_coding	myocyte enhancer factor 2A
chr7	66918148;66943488	66943342;66945123	-	66918148	66945123	cassetteExon	0.5	100	100	ENSMUST00000156690.8	ENSMUSG00000030557.18	Mef2a	chr7	protein_coding	myocyte enhancer factor 2A
chr7	66901490	66914613	-	66901592	66914613	A3SS	0.5	50	50	ENSMUST00000156690.8	ENSMUSG00000030557.18	Mef2a	chr7	protein_coding	myocyte enhancer factor 2A
chr7	66966730	66999597	-	66966730	66999617	A5SS	0.5	50	50	ENSMUST00000156690.8	ENSMUSG00000030557.18	Mef2a	chr7	protein_coding	myocyte enhancer factor 2A
chr7	66915910	66918017	-	66915910	66917815	A5SS	0.5	50	50	ENSMUST00000207794.2	ENSMUSG00000030557.18	Mef2a	chr7	protein_coding	myocyte enhancer factor 2A
chr7	66943488	66945123	-	66917952	66945123	A3SS	0.33	50	50	ENSMUST00000076325.12	ENSMUSG00000030557.18	Mef2a	chr7	protein_coding	myocyte enhancer factor 2A
chr7	66915910;66917952	66917815;66945123	-	66915910;66943488	66918017;66945123	MXE	0.5	100	100	ENSMUST00000072460.13	ENSMUSG00000030557.18	Mef2a	chr7	protein_coding	myocyte enhancer factor 2A
chr7	66917952	66945123	-	66918148	66945123	A3SS	0.33	50	50	ENSMUST00000207486.2	ENSMUSG00000030557.18	Mef2a	chr7	protein_coding	myocyte enhancer factor 2A
chr7	67195216	67267741	-	67195216;67209812	67209606;67267741	ES	0.2	50	50	ENSMUST00000053950.10	ENSMUSG00000030556.14	Lrrc28	chr7	protein_coding	leucine rich repeat containing 28
chr7	67268859	67290852	-	67268859;67278083	67278043;67290852	ES	0.5	50	50	ENSMUST00000053950.10	ENSMUSG00000030556.14	Lrrc28	chr7	protein_coding	leucine rich repeat containing 28
chr7	67268859;67272345	67272319;67278043	-	67268859	67278043	cassetteExon	0.5	100	100	ENSMUST00000053950.10	ENSMUSG00000030556.14	Lrrc28	chr7	protein_coding	leucine rich repeat containing 28
chr7	67209717	67267741	-	67209812	67267741	A3SS	0.2	50	50	ENSMUST00000053950.10	ENSMUSG00000030556.14	Lrrc28	chr7	protein_coding	leucine rich repeat containing 28
chr7	67245479	67267741	-	67209812	67267741	A3SS	0.2	50	50	ENSMUST00000053950.10	ENSMUSG00000030556.14	Lrrc28	chr7	protein_coding	leucine rich repeat containing 28
chr7	67181538	67185001	-	67181538	67195114	A5SS	0.33	50	50	ENSMUST00000053950.10	ENSMUSG00000030556.14	Lrrc28	chr7	protein_coding	leucine rich repeat containing 28
chr7	67209812	67229438	-	67209812	67267741	A5SS	0.5	50	50	ENSMUST00000053950.10	ENSMUSG00000030556.14	Lrrc28	chr7	protein_coding	leucine rich repeat containing 28
chr7	67268859	67269665	-	67268859	67278043	A5SS	0.2	50	50	ENSMUST00000053950.10	ENSMUSG00000030556.14	Lrrc28	chr7	protein_coding	leucine rich repeat containing 28
chr7	67268859	67269700	-	67268859	67278043	A5SS	0.2	50	50	ENSMUST00000053950.10	ENSMUSG00000030556.14	Lrrc28	chr7	protein_coding	leucine rich repeat containing 28
chr7	67195216	67267741	-	67195216;67209717	67209606;67267741	ES	0.2	50	50	ENSMUST00000187953.8	ENSMUSG00000030556.14	Lrrc28	chr7	protein_coding	leucine rich repeat containing 28
chr7	67245479	67267741	-	67209717	67267741	A3SS	0.2	50	50	ENSMUST00000187953.8	ENSMUSG00000030556.14	Lrrc28	chr7	protein_coding	leucine rich repeat containing 28
chr7	67209717	67256815	-	67209717	67267741	A5SS	0.5	50	50	ENSMUST00000187953.8	ENSMUSG00000030556.14	Lrrc28	chr7	protein_coding	leucine rich repeat containing 28
chr7	67268859	67269665	-	67268859	67290852	A5SS	0.2	50	50	ENSMUST00000187953.8	ENSMUSG00000030556.14	Lrrc28	chr7	protein_coding	leucine rich repeat containing 28
chr7	67268859	67269700	-	67268859	67290852	A5SS	0.2	50	50	ENSMUST00000187953.8	ENSMUSG00000030556.14	Lrrc28	chr7	protein_coding	leucine rich repeat containing 28
chr7	67268859	67272319	-	67268859	67290852	A5SS	0.2	50	50	ENSMUST00000187953.8	ENSMUSG00000030556.14	Lrrc28	chr7	protein_coding	leucine rich repeat containing 28
chr7	67181538	67267741	-	67181538	67185001	5pMXE	0.33	50	50	ENSMUST00000185818.2	ENSMUSG00000030556.14	Lrrc28	chr7	protein_coding	leucine rich repeat containing 28
chr7	67268859	67272319	-	67268859	67269700	5pMXE	0.2	50	50	ENSMUST00000190770.7	ENSMUSG00000030556.14	Lrrc28	chr7	protein_coding	leucine rich repeat containing 28
chr7	67181538;67195216	67195114;67267741	-	67181538	67267741	cassetteExon	0.5	100	100	ENSMUST00000190770.7	ENSMUSG00000030556.14	Lrrc28	chr7	protein_coding	leucine rich repeat containing 28
chr7	67209717	67267741	-	67181538	67267741	A3SS	0.2	50	50	ENSMUST00000190770.7	ENSMUSG00000030556.14	Lrrc28	chr7	protein_coding	leucine rich repeat containing 28
chr7	67209812	67267741	-	67181538	67267741	A3SS	0.2	50	50	ENSMUST00000190770.7	ENSMUSG00000030556.14	Lrrc28	chr7	protein_coding	leucine rich repeat containing 28
chr7	67245479	67267741	-	67181538	67267741	A3SS	0.2	50	50	ENSMUST00000190770.7	ENSMUSG00000030556.14	Lrrc28	chr7	protein_coding	leucine rich repeat containing 28
chr7	67268859	67269665	-	67268859	67269700	A5SS	0.2	50	50	ENSMUST00000190770.7	ENSMUSG00000030556.14	Lrrc28	chr7	protein_coding	leucine rich repeat containing 28
chr7	67268859	67272319	-	67268859	67269665	5pMXE	0.2	50	50	ENSMUST00000188971.7	ENSMUSG00000030556.14	Lrrc28	chr7	protein_coding	leucine rich repeat containing 28
chr7	67181538	67267741	-	67195216	67267741	3pMXE	0.2	50	50	ENSMUST00000190276.7	ENSMUSG00000030556.14	Lrrc28	chr7	protein_coding	leucine rich repeat containing 28
chr7	67245479	67267741	-	67195216	67267741	A3SS	0.2	50	50	ENSMUST00000190276.7	ENSMUSG00000030556.14	Lrrc28	chr7	protein_coding	leucine rich repeat containing 28
chr7	67297593	67316911	+	67297593;67312274	67312075;67316911	ES	0.2	50	50	ENSMUST00000133710.8	ENSMUSG00000030555.17	Ttc23	chr7	protein_coding	tetratricopeptide repeat domain 23
chr7	67297593;67299106	67298892;67316911	+	67297593;67312274	67312075;67316911	MXE	0.5	100	100	ENSMUST00000133710.8	ENSMUSG00000030555.17	Ttc23	chr7	protein_coding	tetratricopeptide repeat domain 23
chr7	67297593	67301671	+	67297593	67312075	A3SS	0.25	50	50	ENSMUST00000133710.8	ENSMUSG00000030555.17	Ttc23	chr7	protein_coding	tetratricopeptide repeat domain 23
chr7	67305153	67316911	+	67312274	67316911	A5SS&ES	0.2	50	50	ENSMUST00000133710.8	ENSMUSG00000030555.17	Ttc23	chr7	protein_coding	tetratricopeptide repeat domain 23
chr7	67305317	67312075	+	67297593	67312075	A5SS	0.5	50	50	ENSMUST00000133710.8	ENSMUSG00000030555.17	Ttc23	chr7	protein_coding	tetratricopeptide repeat domain 23
chr7	67316691	67316911	+	67312274	67316911	A5SS	0.2	50	50	ENSMUST00000133710.8	ENSMUSG00000030555.17	Ttc23	chr7	protein_coding	tetratricopeptide repeat domain 23
chr7	67328819	67347972	+	67328819;67342768	67342643;67347972	ES	0.33	50	50	ENSMUST00000032774.16	ENSMUSG00000030555.17	Ttc23	chr7	protein_coding	tetratricopeptide repeat domain 23
chr7	67328819;67329068	67328976;67347972	+	67328819;67342768	67342643;67347972	MXE	0.5	100	100	ENSMUST00000032774.16	ENSMUSG00000030555.17	Ttc23	chr7	protein_coding	tetratricopeptide repeat domain 23
chr7	67375064	67375296	+	67375064	67375776	A3SS	0.5	50	50	ENSMUST00000032774.16	ENSMUSG00000030555.17	Ttc23	chr7	protein_coding	tetratricopeptide repeat domain 23
chr7	67328819;67329068	67328976;67347972	+	67328819	67347972	cassetteExon	0.5	100	100	ENSMUST00000107471.8	ENSMUSG00000030555.17	Ttc23	chr7	protein_coding	tetratricopeptide repeat domain 23
chr7	67297593;67299106	67298892;67316911	+	67297593	67316911	cassetteExon	0.5	100	100	ENSMUST00000126093.8	ENSMUSG00000030555.17	Ttc23	chr7	protein_coding	tetratricopeptide repeat domain 23
chr7	67297593	67301671	+	67297593	67316911	A3SS	0.25	50	50	ENSMUST00000126093.8	ENSMUSG00000030555.17	Ttc23	chr7	protein_coding	tetratricopeptide repeat domain 23
chr7	67305153	67316911	+	67297593	67316911	A5SS	0.2	50	50	ENSMUST00000126093.8	ENSMUSG00000030555.17	Ttc23	chr7	protein_coding	tetratricopeptide repeat domain 23
chr7	67316691	67316911	+	67297593	67316911	A5SS	0.2	50	50	ENSMUST00000126093.8	ENSMUSG00000030555.17	Ttc23	chr7	protein_coding	tetratricopeptide repeat domain 23
chr7	67297593	67301671	+	67297593	67298892	3pMXE	0.25	50	50	ENSMUST00000125839.2	ENSMUSG00000030555.17	Ttc23	chr7	protein_coding	tetratricopeptide repeat domain 23
chr7	67297593	67312075	+	67297593	67298892	3pMXE	0.25	50	50	ENSMUST00000125839.2	ENSMUSG00000030555.17	Ttc23	chr7	protein_coding	tetratricopeptide repeat domain 23
chr7	67297593	67316911	+	67297593	67298892	3pMXE	0.25	50	50	ENSMUST00000125839.2	ENSMUSG00000030555.17	Ttc23	chr7	protein_coding	tetratricopeptide repeat domain 23
chr7	67297593	67316911	+	67299106	67316911	5pMXE	0.2	50	50	ENSMUST00000130681.8	ENSMUSG00000030555.17	Ttc23	chr7	protein_coding	tetratricopeptide repeat domain 23
chr7	67305153	67316911	+	67299106	67316911	A5SS	0.2	50	50	ENSMUST00000130681.8	ENSMUSG00000030555.17	Ttc23	chr7	protein_coding	tetratricopeptide repeat domain 23
chr7	67312274	67316911	+	67299106	67316911	A5SS	0.2	50	50	ENSMUST00000130681.8	ENSMUSG00000030555.17	Ttc23	chr7	protein_coding	tetratricopeptide repeat domain 23
chr7	67316691	67316911	+	67299106	67316911	A5SS	0.2	50	50	ENSMUST00000130681.8	ENSMUSG00000030555.17	Ttc23	chr7	protein_coding	tetratricopeptide repeat domain 23
chr7	67328819	67342643	+	67328819	67328976	3pMXE	0.33	50	50	ENSMUST00000153475.8	ENSMUSG00000030555.17	Ttc23	chr7	protein_coding	tetratricopeptide repeat domain 23
chr7	67328819	67347972	+	67328819	67328976	3pMXE	0.33	50	50	ENSMUST00000153475.8	ENSMUSG00000030555.17	Ttc23	chr7	protein_coding	tetratricopeptide repeat domain 23
chr7	67316691	67316911	+	67305153	67316911	A5SS	0.2	50	50	ENSMUST00000153475.8	ENSMUSG00000030555.17	Ttc23	chr7	protein_coding	tetratricopeptide repeat domain 23
chr7	67361251	67374982	+	67361251	67401508	A3SS	0.5	50	50	ENSMUST00000208764.2	ENSMUSG00000030555.17	Ttc23	chr7	protein_coding	tetratricopeptide repeat domain 23
chr7	67328819	67347972	+	67329068	67347972	5pMXE	0.33	50	50	ENSMUST00000137919.2	ENSMUSG00000030555.17	Ttc23	chr7	protein_coding	tetratricopeptide repeat domain 23
chr7	67342768	67347972	+	67329068	67347972	A5SS	0.33	50	50	ENSMUST00000137919.2	ENSMUSG00000030555.17	Ttc23	chr7	protein_coding	tetratricopeptide repeat domain 23
chr7	67383301	67388853	-	67386654	67388853	A3SS	0.5	50	50	ENSMUST00000074233.12	ENSMUSG00000030554.17	Synm	chr7	protein_coding	synemin, intermediate filament protein
chr7	67388923	67390277	-	67388923	67401552	A5SS	0.5	50	50	ENSMUST00000074233.12	ENSMUSG00000030554.17	Synm	chr7	protein_coding	synemin, intermediate filament protein
chr7	67383301	67384208	-	67383301	67388853	A5SS	0.5	50	50	ENSMUST00000208231.2	ENSMUSG00000030554.17	Synm	chr7	protein_coding	synemin, intermediate filament protein
chr7	67383301	67388853	-	67383301;67386654	67384208;67388853	ES	0.5	50	50	ENSMUST00000051389.10	ENSMUSG00000030554.17	Synm	chr7	protein_coding	synemin, intermediate filament protein
chr7	67436342	67438202	-	67436342	67453113	A5SS	0.5	50	50	ENSMUST00000181235.3	ENSMUSG00000097697.3	4833412C05Rik	chr7	lncRNA	RIKEN cDNA 4833412C05 gene
chr7	67798455	67814741	+	67654103	67814741	A5SS	0.5	50	50	ENSMUST00000005671.10	ENSMUSG00000005533.11	Igf1r	chr7	protein_coding	insulin-like growth factor I receptor
chr7	67888942;67909037	67908985;67913892	-	67888942	67913892	cassetteExon	0.5	100	100	ENSMUST00000032770.4	ENSMUSG00000030553.4	Pgpep1l	chr7	protein_coding	pyroglutamyl-peptidase I-like
chr7	67919982	67924906	-	67919982	67924654	5pMXE	0.5	50	50	ENSMUST00000135564.8	ENSMUSG00000086628.8	Gm16157	chr7	lncRNA	predicted gene 16157
chr7	67971653	67999982	+	67971653;67979147	67978970;67999982	ES	0.33	50	50	ENSMUST00000125685.9	ENSMUSG00000074071.12	Fam169b	chr7	protein_coding	family with sequence similarity 169, member B
chr7	67925789	67950581	+	67923639	67950581	A5SS	0.5	50	50	ENSMUST00000125685.9	ENSMUSG00000074071.12	Fam169b	chr7	protein_coding	family with sequence similarity 169, member B
chr7	67925789	67954300	+	67950711	67954300	A5SS&ES	0.5	50	50	ENSMUST00000125685.9	ENSMUSG00000074071.12	Fam169b	chr7	protein_coding	family with sequence similarity 169, member B
chr7	67988861	67999982	+	67979147	67999982	A5SS	0.33	50	50	ENSMUST00000125685.9	ENSMUSG00000074071.12	Fam169b	chr7	protein_coding	family with sequence similarity 169, member B
chr7	67925789;67950711	67950581;67954300	+	67925789	67954300	cassetteExon	0.5	100	100	ENSMUST00000153805.8	ENSMUSG00000074071.12	Fam169b	chr7	protein_coding	family with sequence similarity 169, member B
chr7	67988861	67999982	+	67971653	67999982	A5SS	0.33	50	50	ENSMUST00000153805.8	ENSMUSG00000074071.12	Fam169b	chr7	protein_coding	family with sequence similarity 169, member B
chr7	67989048	68002906	-	67989048	68002779	A5SS	0.5	50	50	ENSMUST00000123509.8	ENSMUSG00000086410.8	Gm16158	chr7	lncRNA	predicted gene 16158
chr7	68034897	68039115	+	68034897	68035056	3pMXE	0.33	50	50	ENSMUST00000208346.2	ENSMUSG00000109458.2	Gm44889	chr7	lncRNA	predicted gene 44889
chr7	68034897	68041075	+	68034897	68035056	3pMXE	0.33	50	50	ENSMUST00000208346.2	ENSMUSG00000109458.2	Gm44889	chr7	lncRNA	predicted gene 44889
chr7	68034897;68039326	68039115;68041075	+	68034897	68041075	cassetteExon	0.5	100	100	ENSMUST00000208160.2	ENSMUSG00000109458.2	Gm44889	chr7	lncRNA	predicted gene 44889
chr7	68106710	68137815	+	68106710	68137843	A3SS	0.5	50	50	ENSMUST00000208300.2	ENSMUSG00000108828.2	Gm34549	chr7	lncRNA	predicted gene, 34549
chr7	68083620	68105070	+	68103728	68105070	A5SS&ES	0.5	50	50	ENSMUST00000208300.2	ENSMUSG00000108828.2	Gm34549	chr7	lncRNA	predicted gene, 34549
chr7	68083088;68083620	68083523;68085305	+	68083088	68085305	cassetteExon	0.5	100	100	ENSMUST00000208336.2	ENSMUSG00000108828.2	Gm34549	chr7	lncRNA	predicted gene, 34549
chr7	68083620	68105070	+	68083620	68085305	3pMXE	0.5	50	50	ENSMUST00000207057.2	ENSMUSG00000108828.2	Gm34549	chr7	lncRNA	predicted gene, 34549
chr7	68083088	68085305	+	68083088	68083523	A3SS&ES	0.5	50	50	ENSMUST00000207356.2	ENSMUSG00000108828.2	Gm34549	chr7	lncRNA	predicted gene, 34549
chr7	68493485	68537242	-	68493485;68515263	68515117;68537242	ES	0.5	50	50	ENSMUST00000207661.2	ENSMUSG00000109407.2	Gm34664	chr7	lncRNA	predicted gene, 34664
chr7	68537353;68540492	68540365;68564254	-	68537353	68564254	cassetteExon	0.5	100	100	ENSMUST00000207661.2	ENSMUSG00000109407.2	Gm34664	chr7	lncRNA	predicted gene, 34664
chr7	68562647	68564254	-	68537353	68564254	A3SS	0.25	50	50	ENSMUST00000207661.2	ENSMUSG00000109407.2	Gm34664	chr7	lncRNA	predicted gene, 34664
chr7	68562647	68564254	-	68540492	68564254	A3SS	0.25	50	50	ENSMUST00000208503.2	ENSMUSG00000109407.2	Gm34664	chr7	lncRNA	predicted gene, 34664
chr7	68493485;68537353	68537242;68564254	-	68493485	68564254	cassetteExon	0.5	100	100	ENSMUST00000207409.2	ENSMUSG00000109407.2	Gm34664	chr7	lncRNA	predicted gene, 34664
chr7	68540492	68564254	-	68493485	68564254	A3SS	0.25	50	50	ENSMUST00000207409.2	ENSMUSG00000109407.2	Gm34664	chr7	lncRNA	predicted gene, 34664
chr7	68562647	68564254	-	68493485	68564254	A3SS	0.25	50	50	ENSMUST00000207409.2	ENSMUSG00000109407.2	Gm34664	chr7	lncRNA	predicted gene, 34664
chr7	68493485	68515117	-	68493485	68564254	A5SS	0.33	50	50	ENSMUST00000207409.2	ENSMUSG00000109407.2	Gm34664	chr7	lncRNA	predicted gene, 34664
chr7	69146474	69149045	+	69146474	69148575	A3SS	0.5	50	50	ENSMUST00000207348.2	ENSMUSG00000108885.2	4930402F11Rik	chr7	lncRNA	RIKEN cDNA 4930402F11 gene
chr7	69167964	69168661	+	69168246	69168661	A5SS	0.5	50	50	ENSMUST00000208612.2	ENSMUSG00000108885.2	4930402F11Rik	chr7	lncRNA	RIKEN cDNA 4930402F11 gene
chr7	69935385	69987451	-	69859136	69987451	A3SS	0.33	50	50	ENSMUST00000208511.2	ENSMUSG00000109097.2	Gm29683	chr7	lncRNA	predicted gene, 29683
chr7	69958937	69987451	-	69859136	69987451	A3SS	0.33	50	50	ENSMUST00000208511.2	ENSMUSG00000109097.2	Gm29683	chr7	lncRNA	predicted gene, 29683
chr7	69958937	69987451	-	69935385	69987451	A3SS	0.5	50	50	ENSMUST00000209071.2	ENSMUSG00000109097.2	Gm29683	chr7	lncRNA	predicted gene, 29683
chr7	70008038	70015841	-	70008038	70009636	5pMXE	0.33	50	50	ENSMUST00000032768.15	ENSMUSG00000030551.15	Nr2f2	chr7	protein_coding	nuclear receptor subfamily 2, group F, member 2
chr7	70008038	70009562	-	70008038	70009636	A5SS	0.33	50	50	ENSMUST00000032768.15	ENSMUSG00000030551.15	Nr2f2	chr7	protein_coding	nuclear receptor subfamily 2, group F, member 2
chr7	70008038	70009562	-	70008038	70015841	A5SS	0.33	50	50	ENSMUST00000089565.6	ENSMUSG00000030551.15	Nr2f2	chr7	protein_coding	nuclear receptor subfamily 2, group F, member 2
chr7	70038207	70039945	+	70038207;70038633	70038452;70039945	ES	0.5	50	50	ENSMUST00000189966.7	ENSMUSG00000100005.8	B130024G19Rik	chr7	lncRNA	RIKEN cDNA B130024G19 gene
chr7	70051939	70052171	+	70051939	70052176	A3SS	0.5	50	50	ENSMUST00000189966.7	ENSMUSG00000100005.8	B130024G19Rik	chr7	lncRNA	RIKEN cDNA B130024G19 gene
chr7	70060229	70060337	+	70056486	70060337	A5SS	0.5	50	50	ENSMUST00000189966.7	ENSMUSG00000100005.8	B130024G19Rik	chr7	lncRNA	RIKEN cDNA B130024G19 gene
chr7	70038207	70039945	+	70038207	70038452	3pMXE	0.5	50	50	ENSMUST00000080024.6	ENSMUSG00000100005.8	B130024G19Rik	chr7	lncRNA	RIKEN cDNA B130024G19 gene
chr7	70606964	70621791	+	70606964;70607801	70607686;70621791	ES	0.25	50	50	ENSMUST00000208276.2	ENSMUSG00000109532.2	Gm42397	chr7	lncRNA	predicted gene, 42397
chr7	70521004;70584020	70583962;70606752	+	70521004	70606752	cassetteExon	0.5	100	100	ENSMUST00000208276.2	ENSMUSG00000109532.2	Gm42397	chr7	lncRNA	predicted gene, 42397
chr7	70606964;70610359	70610214;70621791	+	70606964;70607801	70607686;70621791	MXE	0.5	100	100	ENSMUST00000208276.2	ENSMUSG00000109532.2	Gm42397	chr7	lncRNA	predicted gene, 42397
chr7	70521004	70561604	+	70521004	70606752	A3SS	0.25	50	50	ENSMUST00000208276.2	ENSMUSG00000109532.2	Gm42397	chr7	lncRNA	predicted gene, 42397
chr7	70606964	70621791	+	70606964;70610359	70610214;70621791	ES	0.25	50	50	ENSMUST00000208692.2	ENSMUSG00000109532.2	Gm42397	chr7	lncRNA	predicted gene, 42397
chr7	70521004	70561604	+	70521004	70583962	A3SS	0.25	50	50	ENSMUST00000208692.2	ENSMUSG00000109532.2	Gm42397	chr7	lncRNA	predicted gene, 42397
chr7	70622694	70624688	+	70622694	70634159	A3SS	0.5	50	50	ENSMUST00000208692.2	ENSMUSG00000109532.2	Gm42397	chr7	lncRNA	predicted gene, 42397
chr7	70521004	70621791	+	70521004;70606964	70606752;70621791	ES	0.25	50	50	ENSMUST00000207709.2	ENSMUSG00000109532.2	Gm42397	chr7	lncRNA	predicted gene, 42397
chr7	70621867	70622568	+	70621867	70722291	A3SS	0.5	50	50	ENSMUST00000208808.2	ENSMUSG00000109532.2	Gm42397	chr7	lncRNA	predicted gene, 42397
chr7	70521004	70561604	+	70521004	70621791	A3SS	0.25	50	50	ENSMUST00000208057.2	ENSMUSG00000109532.2	Gm42397	chr7	lncRNA	predicted gene, 42397
chr7	70521004	70583962	+	70521004	70621791	A3SS	0.25	50	50	ENSMUST00000208057.2	ENSMUSG00000109532.2	Gm42397	chr7	lncRNA	predicted gene, 42397
chr7	70607801	70621791	+	70521004	70621791	A5SS	0.25	50	50	ENSMUST00000208057.2	ENSMUSG00000109532.2	Gm42397	chr7	lncRNA	predicted gene, 42397
chr7	70610359	70621791	+	70521004	70621791	A5SS	0.25	50	50	ENSMUST00000208057.2	ENSMUSG00000109532.2	Gm42397	chr7	lncRNA	predicted gene, 42397
chr7	71020171	71026988	+	71020171;71023167	71023042;71026988	ES	0.25	50	50	ENSMUST00000209182.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	71018675;71019298	71019211;71019521	+	71018675	71019521	cassetteExon	0.5	100	100	ENSMUST00000209182.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	71018675;71019298	71019211;71020083	+	71018675;71019640	71019521;71020083	MXE	0.5	100	100	ENSMUST00000209182.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	71023167;71024949	71024880;71026988	+	71023167	71026988	cassetteExon	0.5	100	100	ENSMUST00000209182.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	71020171	71023130	+	71020171	71023042	A3SS	0.25	50	50	ENSMUST00000209182.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	71020171	71026898	+	71020171	71023042	A3SS&ES	0.25	50	50	ENSMUST00000209182.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	70914049	71020083	+	71019640	71020083	A5SS&ES	0.2	50	50	ENSMUST00000209182.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	71019576	71020083	+	71019640	71020083	A5SS	0.2	50	50	ENSMUST00000209182.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	71019576	71026988	+	71023167	71026988	A5SS&ES	0.25	50	50	ENSMUST00000209182.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	71019767	71020083	+	71019640	71020083	A5SS	0.2	50	50	ENSMUST00000209182.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	70914049;71019767	71019762;71020083	+	70914049	71020083	cassetteExon	0.5	100	100	ENSMUST00000207237.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	71020171;71023167	71023130;71026988	+	71020171	71026988	cassetteExon	0.5	100	100	ENSMUST00000207237.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	71020171	71026898	+	71020171	71026988	A3SS	0.25	50	50	ENSMUST00000207237.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	71019298	71020083	+	70914049	71020083	A5SS	0.2	50	50	ENSMUST00000207237.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	71019576	71020083	+	70914049	71020083	A5SS	0.2	50	50	ENSMUST00000207237.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	71019576	71026988	+	71020171	71026988	A5SS&ES	0.25	50	50	ENSMUST00000207237.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	71024949	71026988	+	71020171	71026988	A5SS	0.25	50	50	ENSMUST00000207237.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	71019298	71020083	+	71019767	71020083	A5SS&ES	0.2	50	50	ENSMUST00000209171.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	71019576	71020083	+	71019767	71020083	A5SS&ES	0.2	50	50	ENSMUST00000209171.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	71020171	71023130	+	71020171	71026898	A3SS	0.25	50	50	ENSMUST00000208757.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	71019576;71020171	71020083;71026988	+	71019576	71026988	cassetteExon	0.5	100	100	ENSMUST00000207149.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	71024949	71026988	+	71019576	71026988	A5SS	0.25	50	50	ENSMUST00000207149.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	71018675;71019576	71019521;71020083	+	71018675;71019298	71019211;71020083	MXE	0.5	100	100	ENSMUST00000208934.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	71018675;71019576	71019521;71026988	+	71018675;71020171	71019211;71026988	MXE	0.5	100	100	ENSMUST00000208934.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	71018675;71019767	71019521;71020083	+	71018675;71019298	71019211;71020083	MXE	0.5	100	100	ENSMUST00000208934.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	71019298;71019576	71019521;71020083	+	71019298	71020083	cassetteExon	0.5	100	100	ENSMUST00000208934.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	71019298;71019576	71019521;71026988	+	71019298;71020171	71020083;71026988	MXE	0.5	100	100	ENSMUST00000208934.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	71019298;71019640	71019521;71020083	+	71019298	71020083	cassetteExon	0.5	100	100	ENSMUST00000208934.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	71019298;71019767	71019521;71020083	+	71019298	71020083	cassetteExon	0.5	100	100	ENSMUST00000208934.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	71018675	71019521	+	71019298	71019521	5pMXE	0.5	50	50	ENSMUST00000207120.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	70914049	71020083	+	71019767	71020083	5pMXE	0.2	50	50	ENSMUST00000207076.2	ENSMUSG00000099853.4	Gm29328	chr7	lncRNA	predicted gene 29328
chr7	71777008;71807555	71807498;71810888	-	71777008	71810888	cassetteExon	0.5	100	100	ENSMUST00000079323.8	ENSMUSG00000032776.10	Mctp2	chr7	protein_coding	multiple C2 domains, transmembrane 2
chr7	71753001	71760281	-	71753001	71771446	A5SS	0.5	50	50	ENSMUST00000079323.8	ENSMUSG00000032776.10	Mctp2	chr7	protein_coding	multiple C2 domains, transmembrane 2
chr7	72835719	72838356	+	72835719;72836934	72836819;72838356	ES	0.5	50	50	ENSMUST00000205849.2	ENSMUSG00000108778.2	Gm20083	chr7	lncRNA	predicted gene, 20083
chr7	72966190;72982253	72982176;73025265	-	72966190	73025265	cassetteExon	0.5	100	100	ENSMUST00000181299.3	ENSMUSG00000097756.3	A730056A06Rik	chr7	lncRNA	RIKEN cDNA A730056A06 gene
chr7	73025636;73041244	73041129;73058980	+	73025636	73058980	cassetteExon	0.5	100	100	ENSMUST00000119206.3	ENSMUSG00000070509.16	Rgma	chr7	protein_coding	repulsive guidance molecule family member A
chr7	73040949	73041129	+	73025636	73041129	A5SS	0.5	50	50	ENSMUST00000094312.12	ENSMUSG00000070509.16	Rgma	chr7	protein_coding	repulsive guidance molecule family member A
chr7	73025636	73058980	+	73041244	73058980	5pMXE	0.5	50	50	ENSMUST00000139780.3	ENSMUSG00000070509.16	Rgma	chr7	protein_coding	repulsive guidance molecule family member A
chr7	73128478	73130709	-	73128478;73130301	73130149;73130709	ES	0.5	50	50	ENSMUST00000169922.9	ENSMUSG00000078671.12	Chd2	chr7	protein_coding	chromodomain helicase DNA binding protein 2
chr7	73149520	73150683	-	73149520;73149731	73149687;73150683	ES	0.5	50	50	ENSMUST00000169922.9	ENSMUSG00000078671.12	Chd2	chr7	protein_coding	chromodomain helicase DNA binding protein 2
chr7	73149731	73151657	-	73149731;73150783	73150683;73151657	ES	0.5	50	50	ENSMUST00000169922.9	ENSMUSG00000078671.12	Chd2	chr7	protein_coding	chromodomain helicase DNA binding protein 2
chr7	73154876	73163838	-	73154876;73157661	73157554;73163838	ES	0.5	50	50	ENSMUST00000169922.9	ENSMUSG00000078671.12	Chd2	chr7	protein_coding	chromodomain helicase DNA binding protein 2
chr7	73169456	73190994	-	73169456;73190652	73190520;73190994	ES	0.5	50	50	ENSMUST00000169922.9	ENSMUSG00000078671.12	Chd2	chr7	protein_coding	chromodomain helicase DNA binding protein 2
chr7	73104199;73104551	73104439;73105239	-	73104199	73105239	cassetteExon	0.5	100	100	ENSMUST00000169922.9	ENSMUSG00000078671.12	Chd2	chr7	protein_coding	chromodomain helicase DNA binding protein 2
chr7	73104199;73104562	73104439;73105239	-	73104199	73105239	cassetteExon	0.5	100	100	ENSMUST00000169922.9	ENSMUSG00000078671.12	Chd2	chr7	protein_coding	chromodomain helicase DNA binding protein 2
chr7	73101638	73102847	-	73101587	73102847	A3SS	0.5	50	50	ENSMUST00000169922.9	ENSMUSG00000078671.12	Chd2	chr7	protein_coding	chromodomain helicase DNA binding protein 2
chr7	73125327	73128407	-	73125241	73128407	A3SS	0.5	50	50	ENSMUST00000169922.9	ENSMUSG00000078671.12	Chd2	chr7	protein_coding	chromodomain helicase DNA binding protein 2
chr7	73189663	73190520	-	73169456	73190520	A3SS	0.5	50	50	ENSMUST00000169922.9	ENSMUSG00000078671.12	Chd2	chr7	protein_coding	chromodomain helicase DNA binding protein 2
chr7	73085726	73091517	-	73085726	73091334	A5SS	0.5	50	50	ENSMUST00000169922.9	ENSMUSG00000078671.12	Chd2	chr7	protein_coding	chromodomain helicase DNA binding protein 2
chr7	73105660	73111347	-	73105660	73113384	A5SS	0.5	50	50	ENSMUST00000169922.9	ENSMUSG00000078671.12	Chd2	chr7	protein_coding	chromodomain helicase DNA binding protein 2
chr7	73169456	73187057	-	73169456	73190520	A5SS	0.33	50	50	ENSMUST00000169922.9	ENSMUSG00000078671.12	Chd2	chr7	protein_coding	chromodomain helicase DNA binding protein 2
chr7	73104562	73105239	-	73104551	73105239	A3SS	0.33	50	50	ENSMUST00000199809.5	ENSMUSG00000078671.12	Chd2	chr7	protein_coding	chromodomain helicase DNA binding protein 2
chr7	73085726	73091517	-	73085726;73091427	73091334;73091517	ES	0.5	50	50	ENSMUST00000208458.2	ENSMUSG00000078671.12	Chd2	chr7	protein_coding	chromodomain helicase DNA binding protein 2
chr7	73149520;73150783	73150683;73151657	-	73149520;73149731	73149687;73151657	MXE	0.5	100	100	ENSMUST00000199601.2	ENSMUSG00000078671.12	Chd2	chr7	protein_coding	chromodomain helicase DNA binding protein 2
chr7	73149731	73151657	-	73150783	73151657	3pMXE	0.5	50	50	ENSMUST00000026895.14	ENSMUSG00000078671.12	Chd2	chr7	protein_coding	chromodomain helicase DNA binding protein 2
chr7	73154876	73163838	-	73157661	73163838	3pMXE	0.5	50	50	ENSMUST00000172704.6	ENSMUSG00000078671.12	Chd2	chr7	protein_coding	chromodomain helicase DNA binding protein 2
chr7	73169456	73190994	-	73169456	73187057	5pMXE	0.33	50	50	ENSMUST00000172704.6	ENSMUSG00000078671.12	Chd2	chr7	protein_coding	chromodomain helicase DNA binding protein 2
chr7	73169456	73190994	-	73190652	73190994	3pMXE	0.5	50	50	ENSMUST00000200218.2	ENSMUSG00000078671.12	Chd2	chr7	protein_coding	chromodomain helicase DNA binding protein 2
chr7	73199400	73205603	-	73199400;73205081	73205003;73205603	ES	0.5	50	50	ENSMUST00000184587.5	ENSMUSG00000101970.9	Chaserr	chr7	lncRNA	CHD2 adjacent suppressive regulatory RNA
chr7	73205081	73207787	-	73205081;73205668	73205603;73207787	ES	0.5	50	50	ENSMUST00000184587.5	ENSMUSG00000101970.9	Chaserr	chr7	lncRNA	CHD2 adjacent suppressive regulatory RNA
chr7	73199400;73203337	73203247;73205003	-	73199400	73205003	cassetteExon	0.5	100	100	ENSMUST00000184587.5	ENSMUSG00000101970.9	Chaserr	chr7	lncRNA	CHD2 adjacent suppressive regulatory RNA
chr7	73194158	73199345	-	73194130	73199345	A3SS	0.5	50	50	ENSMUST00000184587.5	ENSMUSG00000101970.9	Chaserr	chr7	lncRNA	CHD2 adjacent suppressive regulatory RNA
chr7	73205668	73207523	-	73205668	73207787	A5SS	0.5	50	50	ENSMUST00000184587.5	ENSMUSG00000101970.9	Chaserr	chr7	lncRNA	CHD2 adjacent suppressive regulatory RNA
chr7	73199400;73205668	73205603;73207787	-	73199400;73205081	73205003;73207787	MXE	0.5	100	100	ENSMUST00000190028.7	ENSMUSG00000101970.9	Chaserr	chr7	lncRNA	CHD2 adjacent suppressive regulatory RNA
chr7	73205081	73207787	-	73205081	73205603	5pMXE	0.5	50	50	ENSMUST00000183916.8	ENSMUSG00000101970.9	Chaserr	chr7	lncRNA	CHD2 adjacent suppressive regulatory RNA
chr7	73199400	73203247	-	73199400	73205603	A5SS	0.33	50	50	ENSMUST00000184855.8	ENSMUSG00000101970.9	Chaserr	chr7	lncRNA	CHD2 adjacent suppressive regulatory RNA
chr7	73199400	73205603	-	73205081	73205603	3pMXE	0.5	50	50	ENSMUST00000184655.4	ENSMUSG00000101970.9	Chaserr	chr7	lncRNA	CHD2 adjacent suppressive regulatory RNA
chr7	73416366	73425672	+	73416366	73424644	A3SS	0.5	50	50	ENSMUST00000107456.4	ENSMUSG00000078670.4	Fam174b	chr7	protein_coding	family with sequence similarity 174, member B
chr7	73415647	73416235	+	73390576	73416235	A5SS	0.5	50	50	ENSMUST00000107456.4	ENSMUSG00000078670.4	Fam174b	chr7	protein_coding	family with sequence similarity 174, member B
chr7	73461322	73465685	-	73461322;73462730	73462626;73465685	ES	0.5	50	50	ENSMUST00000186073.7	ENSMUSG00000074067.10	Gm10619	chr7	lncRNA	predicted gene 10619
chr7	73459930	73460115	-	73433870	73460115	A3SS	0.5	50	50	ENSMUST00000186073.7	ENSMUSG00000074067.10	Gm10619	chr7	lncRNA	predicted gene 10619
chr7	73621794	73663145	-	73621794;73626468	73626406;73663145	ES	0.5	50	50	ENSMUST00000026896.10	ENSMUSG00000025789.10	St8sia2	chr7	protein_coding	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
chr7	73996659	74153925	-	73996659;74009667	74009569;74153925	ES	0.5	50	50	ENSMUST00000098371.9	ENSMUSG00000025790.15	Slco3a1	chr7	protein_coding	solute carrier organic anion transporter family, member 3a1
chr7	73980799	73996396	-	73977772	73996396	A3SS	0.5	50	50	ENSMUST00000098371.9	ENSMUSG00000025790.15	Slco3a1	chr7	protein_coding	solute carrier organic anion transporter family, member 3a1
chr7	74154390	74179673	-	74154390	74204159	A5SS	0.33	50	50	ENSMUST00000098371.9	ENSMUSG00000025790.15	Slco3a1	chr7	protein_coding	solute carrier organic anion transporter family, member 3a1
chr7	74154390	74201860	-	74154390	74204159	A5SS	0.33	50	50	ENSMUST00000098371.9	ENSMUSG00000025790.15	Slco3a1	chr7	protein_coding	solute carrier organic anion transporter family, member 3a1
chr7	73996659	74153925	-	74009667	74153925	3pMXE	0.5	50	50	ENSMUST00000136389.2	ENSMUSG00000025790.15	Slco3a1	chr7	protein_coding	solute carrier organic anion transporter family, member 3a1
chr7	74154390	74179673	-	74154390	74201860	A5SS	0.33	50	50	ENSMUST00000138099.2	ENSMUSG00000025790.15	Slco3a1	chr7	protein_coding	solute carrier organic anion transporter family, member 3a1
chr7	74502294	74503295	-	74469101	74503295	A3SS	0.5	50	50	ENSMUST00000206672.2	ENSMUSG00000108652.2	0610006L08Rik	chr7	lncRNA	RIKEN cDNA 0610006L08 gene
chr7	74786210;74788696	74788637;74789824	-	74786210	74789824	cassetteExon	0.5	100	100	ENSMUST00000165175.8	ENSMUSG00000053025.14	Sv2b	chr7	protein_coding	synaptic vesicle glycoprotein 2 b
chr7	74807197	74810938	-	74807197	74855838	A5SS	0.5	50	50	ENSMUST00000165175.8	ENSMUSG00000053025.14	Sv2b	chr7	protein_coding	synaptic vesicle glycoprotein 2 b
chr7	74856670	74869554	-	74856670	74958622	A5SS	0.33	50	50	ENSMUST00000165175.8	ENSMUSG00000053025.14	Sv2b	chr7	protein_coding	synaptic vesicle glycoprotein 2 b
chr7	74856670	74957953	-	74856670	74958622	A5SS	0.33	50	50	ENSMUST00000165175.8	ENSMUSG00000053025.14	Sv2b	chr7	protein_coding	synaptic vesicle glycoprotein 2 b
chr7	74856670	74869554	-	74856670	74957953	A5SS	0.33	50	50	ENSMUST00000085164.7	ENSMUSG00000053025.14	Sv2b	chr7	protein_coding	synaptic vesicle glycoprotein 2 b
chr7	74961926	74979153	+	74961926	74967955	3pMXE	0.5	50	50	ENSMUST00000205989.2	ENSMUSG00000097247.3	1500012K07Rik	chr7	lncRNA	RIKEN cDNA 1500012K07 gene
chr7	74958668	74961816	+	74958664	74961816	A5SS	0.5	50	50	ENSMUST00000205989.2	ENSMUSG00000097247.3	1500012K07Rik	chr7	lncRNA	RIKEN cDNA 1500012K07 gene
chr7	75327227	75333142	+	75327227;75329621	75329568;75333142	ES	0.5	50	50	ENSMUST00000207750.2	ENSMUSG00000066406.17	Akap13	chr7	protein_coding	A kinase (PRKA) anchor protein 13
chr7	75329621	75334865	+	75329621;75333207	75333142;75334865	ES	0.33	50	50	ENSMUST00000207750.2	ENSMUSG00000066406.17	Akap13	chr7	protein_coding	A kinase (PRKA) anchor protein 13
chr7	75105843	75184556	+	75105496	75184556	A5SS	0.5	50	50	ENSMUST00000207750.2	ENSMUSG00000066406.17	Akap13	chr7	protein_coding	A kinase (PRKA) anchor protein 13
chr7	75261308	75264669	+	75261296	75264669	A5SS	0.33	50	50	ENSMUST00000207750.2	ENSMUSG00000066406.17	Akap13	chr7	protein_coding	A kinase (PRKA) anchor protein 13
chr7	75262188	75264669	+	75261296	75264669	A5SS	0.33	50	50	ENSMUST00000207750.2	ENSMUSG00000066406.17	Akap13	chr7	protein_coding	A kinase (PRKA) anchor protein 13
chr7	75293212	75313160	+	75264796	75313160	A5SS	0.33	50	50	ENSMUST00000207750.2	ENSMUSG00000066406.17	Akap13	chr7	protein_coding	A kinase (PRKA) anchor protein 13
chr7	75293964	75313160	+	75264796	75313160	A5SS	0.33	50	50	ENSMUST00000207750.2	ENSMUSG00000066406.17	Akap13	chr7	protein_coding	A kinase (PRKA) anchor protein 13
chr7	75340803	75345372	+	75337069	75345372	A5SS	0.5	50	50	ENSMUST00000207750.2	ENSMUSG00000066406.17	Akap13	chr7	protein_coding	A kinase (PRKA) anchor protein 13
chr7	75351900	75354113	+	75347182	75354113	A5SS	0.5	50	50	ENSMUST00000207750.2	ENSMUSG00000066406.17	Akap13	chr7	protein_coding	A kinase (PRKA) anchor protein 13
chr7	75327227	75334865	+	75327227;75329621	75329568;75334865	ES	0.33	50	50	ENSMUST00000166315.7	ENSMUSG00000066406.17	Akap13	chr7	protein_coding	A kinase (PRKA) anchor protein 13
chr7	75327227;75333207	75333142;75334865	+	75327227;75329621	75329568;75334865	MXE	0.5	100	100	ENSMUST00000166315.7	ENSMUSG00000066406.17	Akap13	chr7	protein_coding	A kinase (PRKA) anchor protein 13
chr7	75262188	75264669	+	75261308	75264669	A5SS	0.33	50	50	ENSMUST00000166315.7	ENSMUSG00000066406.17	Akap13	chr7	protein_coding	A kinase (PRKA) anchor protein 13
chr7	75327227;75333207	75333142;75334865	+	75327227	75334865	cassetteExon	0.5	100	100	ENSMUST00000207923.2	ENSMUSG00000066406.17	Akap13	chr7	protein_coding	A kinase (PRKA) anchor protein 13
chr7	75264796	75313160	+	75264796	75326854	A3SS	0.5	50	50	ENSMUST00000208456.2	ENSMUSG00000066406.17	Akap13	chr7	protein_coding	A kinase (PRKA) anchor protein 13
chr7	75316396	75326854	+	75264796	75326854	A5SS	0.5	50	50	ENSMUST00000208456.2	ENSMUSG00000066406.17	Akap13	chr7	protein_coding	A kinase (PRKA) anchor protein 13
chr7	75293964	75313160	+	75293212	75313160	A5SS	0.33	50	50	ENSMUST00000207998.2	ENSMUSG00000066406.17	Akap13	chr7	protein_coding	A kinase (PRKA) anchor protein 13
chr7	75498221	75522446	+	75498221;75516889	75515085;75522446	ES	0.5	50	50	ENSMUST00000171155.4	ENSMUSG00000055652.15	Klhl25	chr7	protein_coding	kelch-like 25
chr7	75498232	75515085	+	75498221	75515085	A5SS	0.33	50	50	ENSMUST00000171155.4	ENSMUSG00000055652.15	Klhl25	chr7	protein_coding	kelch-like 25
chr7	75498324	75515085	+	75498221	75515085	A5SS	0.33	50	50	ENSMUST00000171155.4	ENSMUSG00000055652.15	Klhl25	chr7	protein_coding	kelch-like 25
chr7	75498221	75522446	+	75516889	75522446	A5SS&ES	0.5	50	50	ENSMUST00000092073.11	ENSMUSG00000055652.15	Klhl25	chr7	protein_coding	kelch-like 25
chr7	75498324	75515085	+	75498232	75515085	A5SS	0.33	50	50	ENSMUST00000092073.11	ENSMUSG00000055652.15	Klhl25	chr7	protein_coding	kelch-like 25
chr7	75498221	75515085	+	75498221	75522446	A3SS	0.5	50	50	ENSMUST00000206418.2	ENSMUSG00000055652.15	Klhl25	chr7	protein_coding	kelch-like 25
chr7	76061029	76063274	+	76059106	76063274	A5SS	0.5	50	50	ENSMUST00000156166.8	ENSMUSG00000025754.12	Agbl1	chr7	protein_coding	ATP/GTP binding protein-like 1
chr7	78167241	78244147	-	78167241	78227284	5pMXE	0.33	50	50	ENSMUST00000039431.14	ENSMUSG00000059146.13	Ntrk3	chr7	protein_coding	neurotrophic tyrosine kinase, receptor, type 3
chr7	77848699;77853892	77853851;77896903	-	77848699	77896903	cassetteExon	0.5	100	100	ENSMUST00000039431.14	ENSMUSG00000059146.13	Ntrk3	chr7	protein_coding	neurotrophic tyrosine kinase, receptor, type 3
chr7	77879309	77896903	-	77848699	77896903	A3SS	0.33	50	50	ENSMUST00000039431.14	ENSMUSG00000059146.13	Ntrk3	chr7	protein_coding	neurotrophic tyrosine kinase, receptor, type 3
chr7	77952495	78005775	-	77910162	78005775	A3SS	0.33	50	50	ENSMUST00000039431.14	ENSMUSG00000059146.13	Ntrk3	chr7	protein_coding	neurotrophic tyrosine kinase, receptor, type 3
chr7	77954174	78005775	-	77910162	78005775	A3SS	0.33	50	50	ENSMUST00000039431.14	ENSMUSG00000059146.13	Ntrk3	chr7	protein_coding	neurotrophic tyrosine kinase, receptor, type 3
chr7	77910162	77911556	-	77910162	78005775	A5SS	0.5	50	50	ENSMUST00000039431.14	ENSMUSG00000059146.13	Ntrk3	chr7	protein_coding	neurotrophic tyrosine kinase, receptor, type 3
chr7	78005963	78027454	-	78005963	78100635	A5SS	0.5	50	50	ENSMUST00000039431.14	ENSMUSG00000059146.13	Ntrk3	chr7	protein_coding	neurotrophic tyrosine kinase, receptor, type 3
chr7	78101703	78101797	-	78101703	78103071	A5SS	0.5	50	50	ENSMUST00000039431.14	ENSMUSG00000059146.13	Ntrk3	chr7	protein_coding	neurotrophic tyrosine kinase, receptor, type 3
chr7	78167241	78221419	-	78167241	78227284	A5SS	0.33	50	50	ENSMUST00000039431.14	ENSMUSG00000059146.13	Ntrk3	chr7	protein_coding	neurotrophic tyrosine kinase, receptor, type 3
chr7	77853892	77896903	-	77853892;77879309	77879235;77896903	ES	0.33	50	50	ENSMUST00000195262.6	ENSMUSG00000059146.13	Ntrk3	chr7	protein_coding	neurotrophic tyrosine kinase, receptor, type 3
chr7	77952495	78005775	-	77952495;77954174	77954040;78005775	ES	0.5	50	50	ENSMUST00000039438.9	ENSMUSG00000059146.13	Ntrk3	chr7	protein_coding	neurotrophic tyrosine kinase, receptor, type 3
chr7	78167241	78244147	-	78167241	78221419	5pMXE	0.33	50	50	ENSMUST00000206167.2	ENSMUSG00000059146.13	Ntrk3	chr7	protein_coding	neurotrophic tyrosine kinase, receptor, type 3
chr7	78244334	78307383	-	78244334	78272974	5pMXE	0.5	50	50	ENSMUST00000205700.2	ENSMUSG00000059146.13	Ntrk3	chr7	protein_coding	neurotrophic tyrosine kinase, receptor, type 3
chr7	78235248	78244147	-	78167241	78244147	A3SS	0.33	50	50	ENSMUST00000205700.2	ENSMUSG00000059146.13	Ntrk3	chr7	protein_coding	neurotrophic tyrosine kinase, receptor, type 3
chr7	78237589	78244147	-	78167241	78244147	A3SS	0.33	50	50	ENSMUST00000205700.2	ENSMUSG00000059146.13	Ntrk3	chr7	protein_coding	neurotrophic tyrosine kinase, receptor, type 3
chr7	78227546	78235179	-	78227546	78227999	5pMXE	0.5	50	50	ENSMUST00000206268.2	ENSMUSG00000059146.13	Ntrk3	chr7	protein_coding	neurotrophic tyrosine kinase, receptor, type 3
chr7	78235248;78244334	78244147;78307383	-	78235248	78307383	cassetteExon	0.5	100	100	ENSMUST00000206091.2	ENSMUSG00000059146.13	Ntrk3	chr7	protein_coding	neurotrophic tyrosine kinase, receptor, type 3
chr7	78232506	78235179	-	78227546	78235179	A3SS	0.5	50	50	ENSMUST00000206091.2	ENSMUSG00000059146.13	Ntrk3	chr7	protein_coding	neurotrophic tyrosine kinase, receptor, type 3
chr7	78307483;78307729	78307612;78310365	-	78307483	78310365	cassetteExon	0.5	100	100	ENSMUST00000206849.2	ENSMUSG00000059146.13	Ntrk3	chr7	protein_coding	neurotrophic tyrosine kinase, receptor, type 3
chr7	78237589	78244147	-	78235248	78244147	A3SS	0.5	50	50	ENSMUST00000206849.2	ENSMUSG00000059146.13	Ntrk3	chr7	protein_coding	neurotrophic tyrosine kinase, receptor, type 3
chr7	78377250	78381461	-	78333651	78381461	A3SS	0.5	50	50	ENSMUST00000206877.2	ENSMUSG00000059146.13	Ntrk3	chr7	protein_coding	neurotrophic tyrosine kinase, receptor, type 3
chr7	78333651	78359209	-	78333651	78381461	A5SS	0.5	50	50	ENSMUST00000206877.2	ENSMUSG00000059146.13	Ntrk3	chr7	protein_coding	neurotrophic tyrosine kinase, receptor, type 3
chr7	78235248	78307383	-	78244334	78307383	3pMXE	0.5	50	50	ENSMUST00000206752.2	ENSMUSG00000059146.13	Ntrk3	chr7	protein_coding	neurotrophic tyrosine kinase, receptor, type 3
chr7	78307483	78310365	-	78307483	78307612	5pMXE	0.5	50	50	ENSMUST00000206752.2	ENSMUSG00000059146.13	Ntrk3	chr7	protein_coding	neurotrophic tyrosine kinase, receptor, type 3
chr7	78431334	78432999	-	78431334	78432555	5pMXE	0.5	50	50	ENSMUST00000032841.7	ENSMUSG00000030612.7	Mrpl46	chr7	protein_coding	mitochondrial ribosomal protein L46
chr7	78433434	78438423	+	78433428	78438423	A5SS	0.5	50	50	ENSMUST00000032840.5	ENSMUSG00000030611.11	Mrps11	chr7	protein_coding	mitochondrial ribosomal protein S11
chr7	78477860	78483859	-	78473008	78483859	A3SS	0.5	50	50	ENSMUST00000138062.3	ENSMUSG00000030610.14	Det1	chr7	protein_coding	de-etiolated homolog 1 (Arabidopsis)
chr7	78489940	78492920	-	78489940	78492584	A5SS	0.5	50	50	ENSMUST00000107431.3	ENSMUSG00000030610.14	Det1	chr7	protein_coding	de-etiolated homolog 1 (Arabidopsis)
chr7	78545762;78552389	78551978;78555591	+	78545762	78555591	cassetteExon	0.5	100	100	ENSMUST00000123824.2	ENSMUSG00000030609.19	Aen	chr7	protein_coding	apoptosis enhancing nuclease
chr7	78545762;78552389	78552092;78555591	+	78545762	78555591	cassetteExon	0.5	100	100	ENSMUST00000123824.2	ENSMUSG00000030609.19	Aen	chr7	protein_coding	apoptosis enhancing nuclease
chr7	78545762;78552578	78552092;78555591	+	78545762	78555591	cassetteExon	0.5	100	100	ENSMUST00000123824.2	ENSMUSG00000030609.19	Aen	chr7	protein_coding	apoptosis enhancing nuclease
chr7	78545762	78549119	+	78545762	78555591	A3SS	0.25	50	50	ENSMUST00000123824.2	ENSMUSG00000030609.19	Aen	chr7	protein_coding	apoptosis enhancing nuclease
chr7	78545762	78555591	+	78545762;78552578	78551978;78555591	ES	0.33	50	50	ENSMUST00000107425.8	ENSMUSG00000030609.19	Aen	chr7	protein_coding	apoptosis enhancing nuclease
chr7	78545762	78549119	+	78545762	78551978	A3SS	0.25	50	50	ENSMUST00000107425.8	ENSMUSG00000030609.19	Aen	chr7	protein_coding	apoptosis enhancing nuclease
chr7	78545762	78552092	+	78545762	78551978	A3SS	0.25	50	50	ENSMUST00000107425.8	ENSMUSG00000030609.19	Aen	chr7	protein_coding	apoptosis enhancing nuclease
chr7	78545949	78551978	+	78545762	78551978	A5SS	0.33	50	50	ENSMUST00000107425.8	ENSMUSG00000030609.19	Aen	chr7	protein_coding	apoptosis enhancing nuclease
chr7	78550315	78551978	+	78545762	78551978	A5SS	0.33	50	50	ENSMUST00000107425.8	ENSMUSG00000030609.19	Aen	chr7	protein_coding	apoptosis enhancing nuclease
chr7	78552389	78555591	+	78552578	78555591	A5SS	0.33	50	50	ENSMUST00000107425.8	ENSMUSG00000030609.19	Aen	chr7	protein_coding	apoptosis enhancing nuclease
chr7	78545762	78549119	+	78545762	78552092	A3SS	0.25	50	50	ENSMUST00000107421.8	ENSMUSG00000030609.19	Aen	chr7	protein_coding	apoptosis enhancing nuclease
chr7	78547920	78552092	+	78545762	78552092	A5SS	0.5	50	50	ENSMUST00000107421.8	ENSMUSG00000030609.19	Aen	chr7	protein_coding	apoptosis enhancing nuclease
chr7	78545762	78555591	+	78552578	78555591	A5SS&ES	0.33	50	50	ENSMUST00000107423.2	ENSMUSG00000030609.19	Aen	chr7	protein_coding	apoptosis enhancing nuclease
chr7	78550315	78551978	+	78545949	78551978	A5SS	0.33	50	50	ENSMUST00000107423.2	ENSMUSG00000030609.19	Aen	chr7	protein_coding	apoptosis enhancing nuclease
chr7	78545762	78555591	+	78552389	78555591	5pMXE	0.33	50	50	ENSMUST00000206661.2	ENSMUSG00000030609.19	Aen	chr7	protein_coding	apoptosis enhancing nuclease
chr7	78566481	78569460	+	78566481	78569794	A3SS	0.33	50	50	ENSMUST00000118867.8	ENSMUSG00000039236.19	Isg20	chr7	protein_coding	interferon-stimulated protein
chr7	78566481	78569549	+	78566481	78569794	A3SS	0.33	50	50	ENSMUST00000118867.8	ENSMUSG00000039236.19	Isg20	chr7	protein_coding	interferon-stimulated protein
chr7	78563790	78564070	+	78563242	78564070	A5SS	0.5	50	50	ENSMUST00000118867.8	ENSMUSG00000039236.19	Isg20	chr7	protein_coding	interferon-stimulated protein
chr7	78566481	78569549	+	78566481	78569460	A3SS	0.33	50	50	ENSMUST00000121645.8	ENSMUSG00000039236.19	Isg20	chr7	protein_coding	interferon-stimulated protein
chr7	78750982;78757976	78757863;78761042	+	78750982	78761042	cassetteExon	0.5	100	100	ENSMUST00000032835.7	ENSMUSG00000030607.8	Acan	chr7	protein_coding	aggrecan
chr7	78771763;78772240	78772147;78773118	-	78771763	78773118	cassetteExon	0.5	100	100	ENSMUST00000206092.2	ENSMUSG00000030606.9	Hapln3	chr7	protein_coding	hyaluronan and proteoglycan link protein 3
chr7	78767899	78771639	-	78767899	78771395	A5SS	0.5	50	50	ENSMUST00000206092.2	ENSMUSG00000030606.9	Hapln3	chr7	protein_coding	hyaluronan and proteoglycan link protein 3
chr7	78773299	78778367	-	78773299	78780655	A5SS	0.5	50	50	ENSMUST00000206092.2	ENSMUSG00000030606.9	Hapln3	chr7	protein_coding	hyaluronan and proteoglycan link protein 3
chr7	78792798;78793136	78793026;78794995	-	78792798	78794995	cassetteExon	0.5	100	100	ENSMUST00000107409.5	ENSMUSG00000030605.16	Mfge8	chr7	protein_coding	milk fat globule EGF and factor V/VIII domain containing
chr7	78795492	78797015	-	78795492	78798643	A5SS	0.33	50	50	ENSMUST00000107409.5	ENSMUSG00000030605.16	Mfge8	chr7	protein_coding	milk fat globule EGF and factor V/VIII domain containing
chr7	78795492	78797743	-	78795492	78798643	A5SS	0.33	50	50	ENSMUST00000107409.5	ENSMUSG00000030605.16	Mfge8	chr7	protein_coding	milk fat globule EGF and factor V/VIII domain containing
chr7	78795492	78797743	-	78795492	78797015	5pMXE	0.33	50	50	ENSMUST00000205688.2	ENSMUSG00000030605.16	Mfge8	chr7	protein_coding	milk fat globule EGF and factor V/VIII domain containing
chr7	78921605	78922715	-	78921605	78922491	5pMXE	0.5	50	50	ENSMUST00000206795.2	ENSMUSG00000108387.2	Gm31510	chr7	lncRNA	predicted gene, 31510
chr7	78975349	78991520	+	78975349	78998008	A3SS	0.5	50	50	ENSMUST00000037315.13	ENSMUSG00000039202.13	Abhd2	chr7	protein_coding	abhydrolase domain containing 2
chr7	78947051	78973217	+	78946955	78973217	A5SS	0.5	50	50	ENSMUST00000037315.13	ENSMUSG00000039202.13	Abhd2	chr7	protein_coding	abhydrolase domain containing 2
chr7	79033792	79034407	-	79033710	79034407	A3SS	0.5	50	50	ENSMUST00000179243.3	ENSMUSG00000039194.17	Rlbp1	chr7	protein_coding	retinaldehyde binding protein 1
chr7	79034527	79036086	-	79034527	79036437	A5SS	0.33	50	50	ENSMUST00000179243.3	ENSMUSG00000039194.17	Rlbp1	chr7	protein_coding	retinaldehyde binding protein 1
chr7	79034527	79036218	-	79034527	79036437	A5SS	0.33	50	50	ENSMUST00000179243.3	ENSMUSG00000039194.17	Rlbp1	chr7	protein_coding	retinaldehyde binding protein 1
chr7	79034527	79036086	-	79034527	79036218	A5SS	0.33	50	50	ENSMUST00000206320.3	ENSMUSG00000039194.17	Rlbp1	chr7	protein_coding	retinaldehyde binding protein 1
chr7	79042139	79045641	+	79042013	79045641	A5SS	0.5	50	50	ENSMUST00000126456.8	ENSMUSG00000039187.17	Fanci	chr7	protein_coding	Fanconi anemia, complementation group I
chr7	79067764	79073954	+	79067764;79070098	79070011;79073954	ES	0.33	50	50	ENSMUST00000036865.13	ENSMUSG00000039187.17	Fanci	chr7	protein_coding	Fanconi anemia, complementation group I
chr7	79093823	79094426	+	79093823	79093906	A3SS&ES	0.5	50	50	ENSMUST00000036865.13	ENSMUSG00000039187.17	Fanci	chr7	protein_coding	Fanconi anemia, complementation group I
chr7	79062503;79067764	79067584;79073954	+	79062503	79073954	cassetteExon	0.5	100	100	ENSMUST00000132091.8	ENSMUSG00000039187.17	Fanci	chr7	protein_coding	Fanconi anemia, complementation group I
chr7	79070098	79073954	+	79062503	79073954	A5SS	0.33	50	50	ENSMUST00000132091.8	ENSMUSG00000039187.17	Fanci	chr7	protein_coding	Fanconi anemia, complementation group I
chr7	79105896	79106456	-	79105896;79106260	79106183;79106456	ES	0.5	50	50	ENSMUST00000073889.14	ENSMUSG00000039176.18	Polg	chr7	protein_coding	polymerase (DNA directed), gamma
chr7	79111641;79113709	79113531;79114352	-	79111641	79114352	cassetteExon	0.5	100	100	ENSMUST00000073889.14	ENSMUSG00000039176.18	Polg	chr7	protein_coding	polymerase (DNA directed), gamma
chr7	79099282	79100233	-	79099785	79100233	A3SS	0.5	50	50	ENSMUST00000073889.14	ENSMUSG00000039176.18	Polg	chr7	protein_coding	polymerase (DNA directed), gamma
chr7	79101420	79101608	-	79101498	79101608	A3SS	0.5	50	50	ENSMUST00000073889.14	ENSMUSG00000039176.18	Polg	chr7	protein_coding	polymerase (DNA directed), gamma
chr7	79101917	79103453	-	79101977	79103453	A3SS	0.5	50	50	ENSMUST00000073889.14	ENSMUSG00000039176.18	Polg	chr7	protein_coding	polymerase (DNA directed), gamma
chr7	79105936	79106183	-	79105896	79106183	A3SS	0.5	50	50	ENSMUST00000073889.14	ENSMUSG00000039176.18	Polg	chr7	protein_coding	polymerase (DNA directed), gamma
chr7	79109048	79109261	-	79109048	79109185	A5SS	0.33	50	50	ENSMUST00000073889.14	ENSMUSG00000039176.18	Polg	chr7	protein_coding	polymerase (DNA directed), gamma
chr7	79109048	79109459	-	79109048	79109185	A5SS&ES	0.33	50	50	ENSMUST00000073889.14	ENSMUSG00000039176.18	Polg	chr7	protein_coding	polymerase (DNA directed), gamma
chr7	79109333	79109459	-	79109333	79109437	A5SS	0.5	50	50	ENSMUST00000073889.14	ENSMUSG00000039176.18	Polg	chr7	protein_coding	polymerase (DNA directed), gamma
chr7	79115119	79115651	-	79115119	79115818	A5SS	0.5	50	50	ENSMUST00000073889.14	ENSMUSG00000039176.18	Polg	chr7	protein_coding	polymerase (DNA directed), gamma
chr7	79099282;79099785	79099697;79100233	-	79099282	79100233	cassetteExon	0.5	100	100	ENSMUST00000201662.2	ENSMUSG00000039176.18	Polg	chr7	protein_coding	polymerase (DNA directed), gamma
chr7	79109048	79109459	-	79109048	79109261	A5SS&ES	0.33	50	50	ENSMUST00000149444.8	ENSMUSG00000039176.18	Polg	chr7	protein_coding	polymerase (DNA directed), gamma
chr7	79105896	79106456	-	79106260	79106456	A3SS&ES	0.5	50	50	ENSMUST00000132048.5	ENSMUSG00000039176.18	Polg	chr7	protein_coding	polymerase (DNA directed), gamma
chr7	79109048;79109333	79109185;79109459	-	79109048	79109459	cassetteExon	0.5	100	100	ENSMUST00000143672.3	ENSMUSG00000039176.18	Polg	chr7	protein_coding	polymerase (DNA directed), gamma
chr7	79109048;79109333	79109261;79109459	-	79109048	79109459	cassetteExon	0.5	100	100	ENSMUST00000143672.3	ENSMUSG00000039176.18	Polg	chr7	protein_coding	polymerase (DNA directed), gamma
chr7	79109048	79109459	-	79109333	79109459	3pMXE	0.5	50	50	ENSMUST00000142915.3	ENSMUSG00000039176.18	Polg	chr7	protein_coding	polymerase (DNA directed), gamma
chr7	79149998;79173724	79173665;79180934	+	79149998	79180934	cassetteExon	0.5	100	100	ENSMUST00000182495.2	ENSMUSG00000097023.9	Mir9-3hg	chr7	lncRNA	Mir9-3 host gene
chr7	79149998;79177617	79177511;79180934	+	79149998	79180934	cassetteExon	0.5	100	100	ENSMUST00000182495.2	ENSMUSG00000097023.9	Mir9-3hg	chr7	lncRNA	Mir9-3 host gene
chr7	79165420	79180934	+	79149998	79180934	A5SS	0.25	50	50	ENSMUST00000182495.2	ENSMUSG00000097023.9	Mir9-3hg	chr7	lncRNA	Mir9-3 host gene
chr7	79149998;79173724	79173665;79177511	+	79149998	79177511	cassetteExon	0.5	100	100	ENSMUST00000183043.8	ENSMUSG00000097023.9	Mir9-3hg	chr7	lncRNA	Mir9-3 host gene
chr7	79149998;79173724	79173665;79180934	+	79149998;79177617	79177511;79180934	MXE	0.5	100	100	ENSMUST00000183043.8	ENSMUSG00000097023.9	Mir9-3hg	chr7	lncRNA	Mir9-3 host gene
chr7	79177617	79180751	+	79177617	79180934	A3SS	0.5	50	50	ENSMUST00000183043.8	ENSMUSG00000097023.9	Mir9-3hg	chr7	lncRNA	Mir9-3 host gene
chr7	79165420	79180934	+	79177617	79180934	A5SS&ES	0.25	50	50	ENSMUST00000183043.8	ENSMUSG00000097023.9	Mir9-3hg	chr7	lncRNA	Mir9-3 host gene
chr7	79174424	79177511	+	79149998	79177511	A5SS	0.33	50	50	ENSMUST00000183043.8	ENSMUSG00000097023.9	Mir9-3hg	chr7	lncRNA	Mir9-3 host gene
chr7	79173724;79177617	79177511;79180934	+	79173724	79180934	cassetteExon	0.5	100	100	ENSMUST00000181511.9	ENSMUSG00000097023.9	Mir9-3hg	chr7	lncRNA	Mir9-3 host gene
chr7	79173724	79174294	+	79173724	79180934	A3SS	0.33	50	50	ENSMUST00000181511.9	ENSMUSG00000097023.9	Mir9-3hg	chr7	lncRNA	Mir9-3 host gene
chr7	79165420	79173665	+	79149998	79173665	A5SS	0.5	50	50	ENSMUST00000181511.9	ENSMUSG00000097023.9	Mir9-3hg	chr7	lncRNA	Mir9-3 host gene
chr7	79165420	79180934	+	79173724	79180934	A5SS&ES	0.25	50	50	ENSMUST00000181511.9	ENSMUSG00000097023.9	Mir9-3hg	chr7	lncRNA	Mir9-3 host gene
chr7	79173724	79177511	+	79173724;79174424	79174294;79177511	ES	0.33	50	50	ENSMUST00000182937.8	ENSMUSG00000097023.9	Mir9-3hg	chr7	lncRNA	Mir9-3 host gene
chr7	79165420;79173724	79173665;79180934	+	79165420	79180934	cassetteExon	0.5	100	100	ENSMUST00000180881.3	ENSMUSG00000097023.9	Mir9-3hg	chr7	lncRNA	Mir9-3 host gene
chr7	79243425	79244530	-	79243548	79244530	A3SS	0.5	50	50	ENSMUST00000032766.5	ENSMUSG00000030549.7	Rhcg	chr7	protein_coding	Rhesus blood group-associated C glycoprotein
chr7	79341727	79345683	+	79341727;79345570	79343449;79345683	ES	0.5	50	50	ENSMUST00000035977.9	ENSMUSG00000046591.11	Ticrr	chr7	protein_coding	TOPBP1-interacting checkpoint and replication regulator
chr7	79325156	79325258	+	79325156	79326975	A3SS	0.5	50	50	ENSMUST00000035977.9	ENSMUSG00000046591.11	Ticrr	chr7	protein_coding	TOPBP1-interacting checkpoint and replication regulator
chr7	79325210	79326975	+	79325156	79326975	A5SS	0.5	50	50	ENSMUST00000035977.9	ENSMUSG00000046591.11	Ticrr	chr7	protein_coding	TOPBP1-interacting checkpoint and replication regulator
chr7	79330795	79331558	+	79330756	79331558	A5SS	0.5	50	50	ENSMUST00000035977.9	ENSMUSG00000046591.11	Ticrr	chr7	protein_coding	TOPBP1-interacting checkpoint and replication regulator
chr7	79335703	79337974	+	79335686	79337974	A5SS	0.5	50	50	ENSMUST00000035977.9	ENSMUSG00000046591.11	Ticrr	chr7	protein_coding	TOPBP1-interacting checkpoint and replication regulator
chr7	79341727	79343449	+	79341727	79345683	A3SS	0.5	50	50	ENSMUST00000206622.2	ENSMUSG00000046591.11	Ticrr	chr7	protein_coding	TOPBP1-interacting checkpoint and replication regulator
chr7	79345570	79345683	+	79341727	79345683	A5SS	0.5	50	50	ENSMUST00000206622.2	ENSMUSG00000046591.11	Ticrr	chr7	protein_coding	TOPBP1-interacting checkpoint and replication regulator
chr7	79352027	79352201	-	79352030	79352201	A3SS	0.5	50	50	ENSMUST00000183846.8	ENSMUSG00000050382.15	Kif7	chr7	protein_coding	kinesin family member 7
chr7	79381903	79382434	-	79381903	79382490	A5SS	0.5	50	50	ENSMUST00000205915.2	ENSMUSG00000030546.15	Plin1	chr7	protein_coding	perilipin 1
chr7	79387658	79392658	-	79387658;79390028	79389913;79392658	ES	0.5	50	50	ENSMUST00000032761.8	ENSMUSG00000030545.10	Pex11a	chr7	protein_coding	peroxisomal biogenesis factor 11 alpha
chr7	79387658	79392658	-	79387658	79389913	5pMXE	0.5	50	50	ENSMUST00000139620.2	ENSMUSG00000030545.10	Pex11a	chr7	protein_coding	peroxisomal biogenesis factor 11 alpha
chr7	79492408	79510667	-	79492408	79497893	5pMXE	0.33	50	50	ENSMUST00000107392.8	ENSMUSG00000039062.16	Anpep	chr7	protein_coding	alanyl (membrane) aminopeptidase
chr7	79492408;79492856	79492775;79497893	-	79492408	79497893	cassetteExon	0.5	100	100	ENSMUST00000107392.8	ENSMUSG00000039062.16	Anpep	chr7	protein_coding	alanyl (membrane) aminopeptidase
chr7	79492408	79497893	-	79477411	79497893	A3SS	0.33	50	50	ENSMUST00000205502.2	ENSMUSG00000039062.16	Anpep	chr7	protein_coding	alanyl (membrane) aminopeptidase
chr7	79492856	79497893	-	79477411	79497893	A3SS	0.33	50	50	ENSMUST00000205502.2	ENSMUSG00000039062.16	Anpep	chr7	protein_coding	alanyl (membrane) aminopeptidase
chr7	79477411	79483335	-	79477411	79497893	A5SS	0.5	50	50	ENSMUST00000205502.2	ENSMUSG00000039062.16	Anpep	chr7	protein_coding	alanyl (membrane) aminopeptidase
chr7	79492408	79492775	-	79492408	79510667	A5SS	0.33	50	50	ENSMUST00000206235.2	ENSMUSG00000039062.16	Anpep	chr7	protein_coding	alanyl (membrane) aminopeptidase
chr7	79565855;79567070	79566979;79570257	-	79565855	79570257	cassetteExon	0.5	100	100	ENSMUST00000075657.8	ENSMUSG00000063801.8	Ap3s2	chr7	protein_coding	adaptor-related protein complex 3, sigma 2 subunit
chr7	79736356;79738380	79738283;79740083	+	79736356	79740083	cassetteExon	0.5	100	100	ENSMUST00000164056.9	ENSMUSG00000048897.16	Zfp710	chr7	protein_coding	zinc finger protein 710
chr7	79676231	79730797	+	79674734	79730797	A5SS	0.33	50	50	ENSMUST00000164056.9	ENSMUSG00000048897.16	Zfp710	chr7	protein_coding	zinc finger protein 710
chr7	79677833	79730797	+	79674734	79730797	A5SS	0.33	50	50	ENSMUST00000164056.9	ENSMUSG00000048897.16	Zfp710	chr7	protein_coding	zinc finger protein 710
chr7	79677833	79730797	+	79676231	79730797	A5SS	0.33	50	50	ENSMUST00000049680.10	ENSMUSG00000048897.16	Zfp710	chr7	protein_coding	zinc finger protein 710
chr7	79723999	79724823	-	79719406	79724823	A3SS	0.5	50	50	ENSMUST00000206111.2	ENSMUSG00000108714.2	Gm21057	chr7	lncRNA	predicted gene, 21057
chr7	79747703	79748519	-	79747703;79748020	79747884;79748519	ES	0.33	50	50	ENSMUST00000107384.10	ENSMUSG00000030541.17	Idh2	chr7	protein_coding	isocitrate dehydrogenase 2 (NADP+), mitochondrial
chr7	79745883;79746958	79746920;79747552	-	79745883	79747552	cassetteExon	0.5	100	100	ENSMUST00000107384.10	ENSMUSG00000030541.17	Idh2	chr7	protein_coding	isocitrate dehydrogenase 2 (NADP+), mitochondrial
chr7	79748129	79748519	-	79748020	79748519	A3SS	0.33	50	50	ENSMUST00000107384.10	ENSMUSG00000030541.17	Idh2	chr7	protein_coding	isocitrate dehydrogenase 2 (NADP+), mitochondrial
chr7	79747703	79748519	-	79747703;79748129	79747884;79748519	ES	0.33	50	50	ENSMUST00000134328.8	ENSMUSG00000030541.17	Idh2	chr7	protein_coding	isocitrate dehydrogenase 2 (NADP+), mitochondrial
chr7	79880172	79882258	-	79880172;79882126	79882092;79882258	ES	0.33	50	50	ENSMUST00000065163.15	ENSMUSG00000030538.16	Cib1	chr7	protein_coding	calcium and integrin binding 1 (calmyrin)
chr7	79880172;79880738	79880673;79882092	-	79880172	79882092	cassetteExon	0.5	100	100	ENSMUST00000065163.15	ENSMUSG00000030538.16	Cib1	chr7	protein_coding	calcium and integrin binding 1 (calmyrin)
chr7	79878281	79880064	-	79878296	79880064	A3SS	0.5	50	50	ENSMUST00000065163.15	ENSMUSG00000030538.16	Cib1	chr7	protein_coding	calcium and integrin binding 1 (calmyrin)
chr7	79878296	79882258	-	79882126	79882258	A3SS&ES	0.33	50	50	ENSMUST00000206084.2	ENSMUSG00000030538.16	Cib1	chr7	protein_coding	calcium and integrin binding 1 (calmyrin)
chr7	79878296;79880172	79880064;79882258	-	79878296	79882258	cassetteExon	0.5	100	100	ENSMUST00000071457.12	ENSMUSG00000030538.16	Cib1	chr7	protein_coding	calcium and integrin binding 1 (calmyrin)
chr7	79880172	79882258	-	79880172	79882092	5pMXE	0.33	50	50	ENSMUST00000123279.8	ENSMUSG00000030538.16	Cib1	chr7	protein_coding	calcium and integrin binding 1 (calmyrin)
chr7	79878296	79882258	-	79878296	79880064	5pMXE	0.5	50	50	ENSMUST00000206211.2	ENSMUSG00000030538.16	Cib1	chr7	protein_coding	calcium and integrin binding 1 (calmyrin)
chr7	79880172	79880673	-	79880172	79882258	A5SS	0.33	50	50	ENSMUST00000205996.2	ENSMUSG00000030538.16	Cib1	chr7	protein_coding	calcium and integrin binding 1 (calmyrin)
chr7	79880172	79882258	-	79882126	79882258	3pMXE	0.33	50	50	ENSMUST00000144295.2	ENSMUSG00000030538.16	Cib1	chr7	protein_coding	calcium and integrin binding 1 (calmyrin)
chr7	79909441	79909821	+	79909441	79910077	A3SS	0.5	50	50	ENSMUST00000058266.9	ENSMUSG00000045467.14	Ttll13	chr7	protein_coding	tubulin tyrosine ligase-like family, member 13
chr7	79924057	79925794	+	79924057;79924433	79924372;79925794	ES	0.5	50	50	ENSMUST00000032749.12	ENSMUSG00000030534.14	Vps33b	chr7	protein_coding	vacuolar protein sorting 33B
chr7	79940312	79941375	+	79940312	79940863	3pMXE	0.5	50	50	ENSMUST00000032749.12	ENSMUSG00000030534.14	Vps33b	chr7	protein_coding	vacuolar protein sorting 33B
chr7	79929781	79932233	+	79929765	79932233	A5SS	0.5	50	50	ENSMUST00000032749.12	ENSMUSG00000030534.14	Vps33b	chr7	protein_coding	vacuolar protein sorting 33B
chr7	79924057;79924433	79924372;79929720	+	79924057;79926213	79925794;79929720	MXE	0.5	100	100	ENSMUST00000135053.8	ENSMUSG00000030534.14	Vps33b	chr7	protein_coding	vacuolar protein sorting 33B
chr7	79924433;79926213	79925794;79929720	+	79924433	79929720	cassetteExon	0.5	100	100	ENSMUST00000145594.3	ENSMUSG00000030534.14	Vps33b	chr7	protein_coding	vacuolar protein sorting 33B
chr7	79970929	79973498	-	79970929;79971091	79971025;79973498	ES	0.5	50	50	ENSMUST00000047362.11	ENSMUSG00000038930.12	Rccd1	chr7	protein_coding	RCC1 domain containing 1
chr7	79970903	79971025	-	79970929	79971025	A3SS	0.5	50	50	ENSMUST00000047362.11	ENSMUSG00000038930.12	Rccd1	chr7	protein_coding	RCC1 domain containing 1
chr7	79970929	79973498	-	79971091	79973498	A3SS&ES	0.5	50	50	ENSMUST00000121882.8	ENSMUSG00000038930.12	Rccd1	chr7	protein_coding	RCC1 domain containing 1
chr7	79950181	79954109	+	79950181;79950907	79950785;79954109	ES	0.5	50	50	ENSMUST00000163812.9	ENSMUSG00000038943.17	Prc1	chr7	protein_coding	protein regulator of cytokinesis 1
chr7	79957443	79960489	+	79957443;79959236	79959141;79960489	ES	0.5	50	50	ENSMUST00000163812.9	ENSMUSG00000038943.17	Prc1	chr7	protein_coding	protein regulator of cytokinesis 1
chr7	79962956;79963316	79963275;79964862	+	79962956	79964862	cassetteExon	0.5	100	100	ENSMUST00000163812.9	ENSMUSG00000038943.17	Prc1	chr7	protein_coding	protein regulator of cytokinesis 1
chr7	79962956;79963316	79963278;79964862	+	79962956	79964862	cassetteExon	0.5	100	100	ENSMUST00000163812.9	ENSMUSG00000038943.17	Prc1	chr7	protein_coding	protein regulator of cytokinesis 1
chr7	79960919	79961965	+	79960928	79961965	A5SS	0.5	50	50	ENSMUST00000163812.9	ENSMUSG00000038943.17	Prc1	chr7	protein_coding	protein regulator of cytokinesis 1
chr7	79962879	79964862	+	79962956	79964862	A5SS	0.33	50	50	ENSMUST00000163812.9	ENSMUSG00000038943.17	Prc1	chr7	protein_coding	protein regulator of cytokinesis 1
chr7	79962879;79963316	79963275;79964862	+	79962879	79964862	cassetteExon	0.5	100	100	ENSMUST00000174199.8	ENSMUSG00000038943.17	Prc1	chr7	protein_coding	protein regulator of cytokinesis 1
chr7	79950181	79954109	+	79950181	79950785	A3SS	0.5	50	50	ENSMUST00000173914.3	ENSMUSG00000038943.17	Prc1	chr7	protein_coding	protein regulator of cytokinesis 1
chr7	79962956	79963278	+	79962956	79963275	A3SS	0.33	50	50	ENSMUST00000174172.8	ENSMUSG00000038943.17	Prc1	chr7	protein_coding	protein regulator of cytokinesis 1
chr7	79962879	79963275	+	79962956	79963275	A5SS	0.5	50	50	ENSMUST00000174172.8	ENSMUSG00000038943.17	Prc1	chr7	protein_coding	protein regulator of cytokinesis 1
chr7	79962879	79964862	+	79963316	79964862	A5SS&ES	0.33	50	50	ENSMUST00000174172.8	ENSMUSG00000038943.17	Prc1	chr7	protein_coding	protein regulator of cytokinesis 1
chr7	79957443	79960489	+	79959236	79960489	5pMXE	0.5	50	50	ENSMUST00000174051.8	ENSMUSG00000038943.17	Prc1	chr7	protein_coding	protein regulator of cytokinesis 1
chr7	79962956	79964862	+	79963316	79964862	A5SS&ES	0.33	50	50	ENSMUST00000174111.8	ENSMUSG00000038943.17	Prc1	chr7	protein_coding	protein regulator of cytokinesis 1
chr7	79962879	79964862	+	79962879	79963275	3pMXE	0.5	50	50	ENSMUST00000174599.2	ENSMUSG00000038943.17	Prc1	chr7	protein_coding	protein regulator of cytokinesis 1
chr7	79978879	79979254	-	79978910	79979254	A3SS	0.5	50	50	ENSMUST00000154428.9	ENSMUSG00000030533.17	Unc45a	chr7	protein_coding	unc-45 myosin chaperone A
chr7	79988907	79989062	-	79988764	79989062	A3SS	0.5	50	50	ENSMUST00000154428.9	ENSMUSG00000030533.17	Unc45a	chr7	protein_coding	unc-45 myosin chaperone A
chr7	79989455	79989817	-	79989460	79989817	A3SS	0.5	50	50	ENSMUST00000154428.9	ENSMUSG00000030533.17	Unc45a	chr7	protein_coding	unc-45 myosin chaperone A
chr7	79989460	79989862	-	79989460	79989817	A5SS	0.33	50	50	ENSMUST00000154428.9	ENSMUSG00000030533.17	Unc45a	chr7	protein_coding	unc-45 myosin chaperone A
chr7	79989460	79990094	-	79989460	79989817	A5SS	0.33	50	50	ENSMUST00000154428.9	ENSMUSG00000030533.17	Unc45a	chr7	protein_coding	unc-45 myosin chaperone A
chr7	79989460	79989862	-	79989460	79990094	A5SS	0.33	50	50	ENSMUST00000107368.9	ENSMUSG00000030533.17	Unc45a	chr7	protein_coding	unc-45 myosin chaperone A
chr7	79993704	79999869	+	79993704	79995396	3pMXE	0.14	50	50	ENSMUST00000032747.7	ENSMUSG00000030532.7	Hddc3	chr7	protein_coding	HD domain containing 3
chr7	79993342	79993427	+	79993342	79993464	A3SS	0.5	50	50	ENSMUST00000032747.7	ENSMUSG00000030532.7	Hddc3	chr7	protein_coding	HD domain containing 3
chr7	79993704	79993850	+	79993704	79995396	A3SS	0.14	50	50	ENSMUST00000032747.7	ENSMUSG00000030532.7	Hddc3	chr7	protein_coding	HD domain containing 3
chr7	79993704	79994362	+	79993704	79995396	A3SS	0.14	50	50	ENSMUST00000032747.7	ENSMUSG00000030532.7	Hddc3	chr7	protein_coding	HD domain containing 3
chr7	79993704	79994659	+	79993704	79995396	A3SS	0.14	50	50	ENSMUST00000032747.7	ENSMUSG00000030532.7	Hddc3	chr7	protein_coding	HD domain containing 3
chr7	79993704	79994814	+	79993704	79995396	A3SS	0.14	50	50	ENSMUST00000032747.7	ENSMUSG00000030532.7	Hddc3	chr7	protein_coding	HD domain containing 3
chr7	79993704	79994925	+	79993704	79995396	A3SS	0.14	50	50	ENSMUST00000032747.7	ENSMUSG00000030532.7	Hddc3	chr7	protein_coding	HD domain containing 3
chr7	79993203	79993287	+	79992997	79993287	A5SS	0.5	50	50	ENSMUST00000032747.7	ENSMUSG00000030532.7	Hddc3	chr7	protein_coding	HD domain containing 3
chr7	79993704	79999869	+	79993704	79994925	3pMXE	0.14	50	50	ENSMUST00000206074.2	ENSMUSG00000030532.7	Hddc3	chr7	protein_coding	HD domain containing 3
chr7	79993704	79993850	+	79993704	79994925	A3SS	0.14	50	50	ENSMUST00000206074.2	ENSMUSG00000030532.7	Hddc3	chr7	protein_coding	HD domain containing 3
chr7	79993704	79994362	+	79993704	79994925	A3SS	0.14	50	50	ENSMUST00000206074.2	ENSMUSG00000030532.7	Hddc3	chr7	protein_coding	HD domain containing 3
chr7	79993704	79994659	+	79993704	79994925	A3SS	0.14	50	50	ENSMUST00000206074.2	ENSMUSG00000030532.7	Hddc3	chr7	protein_coding	HD domain containing 3
chr7	79993704	79994814	+	79993704	79994925	A3SS	0.14	50	50	ENSMUST00000206074.2	ENSMUSG00000030532.7	Hddc3	chr7	protein_coding	HD domain containing 3
chr7	79993704	79999869	+	79993704	79994659	3pMXE	0.14	50	50	ENSMUST00000206122.2	ENSMUSG00000030532.7	Hddc3	chr7	protein_coding	HD domain containing 3
chr7	79993704	79993850	+	79993704	79994659	A3SS	0.14	50	50	ENSMUST00000206122.2	ENSMUSG00000030532.7	Hddc3	chr7	protein_coding	HD domain containing 3
chr7	79993704	79994362	+	79993704	79994659	A3SS	0.14	50	50	ENSMUST00000206122.2	ENSMUSG00000030532.7	Hddc3	chr7	protein_coding	HD domain containing 3
chr7	79993704	79994814	+	79993704	79994659	A3SS	0.14	50	50	ENSMUST00000206122.2	ENSMUSG00000030532.7	Hddc3	chr7	protein_coding	HD domain containing 3
chr7	79993704	79999869	+	79993704	79994814	3pMXE	0.14	50	50	ENSMUST00000205531.2	ENSMUSG00000030532.7	Hddc3	chr7	protein_coding	HD domain containing 3
chr7	79993704	79993850	+	79993704	79994814	A3SS	0.14	50	50	ENSMUST00000205531.2	ENSMUSG00000030532.7	Hddc3	chr7	protein_coding	HD domain containing 3
chr7	79993704	79994362	+	79993704	79994814	A3SS	0.14	50	50	ENSMUST00000205531.2	ENSMUSG00000030532.7	Hddc3	chr7	protein_coding	HD domain containing 3
chr7	79993704	79999869	+	79993704	79994362	3pMXE	0.14	50	50	ENSMUST00000205768.2	ENSMUSG00000030532.7	Hddc3	chr7	protein_coding	HD domain containing 3
chr7	79993704	79993850	+	79993704	79994362	A3SS	0.14	50	50	ENSMUST00000205768.2	ENSMUSG00000030532.7	Hddc3	chr7	protein_coding	HD domain containing 3
chr7	79993704	79999869	+	79993704	79993850	3pMXE	0.14	50	50	ENSMUST00000205448.2	ENSMUSG00000030532.7	Hddc3	chr7	protein_coding	HD domain containing 3
chr7	80003110;80005810	80005736;80006090	-	80003110	80006090	cassetteExon	0.5	100	100	ENSMUST00000205318.2	ENSMUSG00000038886.11	Man2a2	chr7	protein_coding	mannosidase 2, alpha 2
chr7	80012986	80013215	-	80013084	80013215	A3SS	0.5	50	50	ENSMUST00000098346.5	ENSMUSG00000038886.11	Man2a2	chr7	protein_coding	mannosidase 2, alpha 2
chr7	80019520	80020480	-	80019493	80020480	A3SS	0.5	50	50	ENSMUST00000098346.5	ENSMUSG00000038886.11	Man2a2	chr7	protein_coding	mannosidase 2, alpha 2
chr7	80029482	80029566	-	80029452	80029566	A3SS	0.5	50	50	ENSMUST00000205617.2	ENSMUSG00000053158.11	Fes	chr7	protein_coding	feline sarcoma oncogene
chr7	80032138	80032269	-	80032144	80032269	A3SS	0.33	50	50	ENSMUST00000205617.2	ENSMUSG00000053158.11	Fes	chr7	protein_coding	feline sarcoma oncogene
chr7	80032179	80032269	-	80032144	80032269	A3SS	0.33	50	50	ENSMUST00000205617.2	ENSMUSG00000053158.11	Fes	chr7	protein_coding	feline sarcoma oncogene
chr7	80036920	80037585	-	80037091	80037585	A3SS	0.33	50	50	ENSMUST00000205617.2	ENSMUSG00000053158.11	Fes	chr7	protein_coding	feline sarcoma oncogene
chr7	80037195	80037585	-	80037091	80037585	A3SS	0.33	50	50	ENSMUST00000205617.2	ENSMUSG00000053158.11	Fes	chr7	protein_coding	feline sarcoma oncogene
chr7	80033765	80033988	-	80033765	80033939	A5SS	0.5	50	50	ENSMUST00000205617.2	ENSMUSG00000053158.11	Fes	chr7	protein_coding	feline sarcoma oncogene
chr7	80032138	80032269	-	80032179	80032269	A3SS	0.33	50	50	ENSMUST00000206744.2	ENSMUSG00000053158.11	Fes	chr7	protein_coding	feline sarcoma oncogene
chr7	80037195	80037585	-	80036920	80037585	A3SS	0.33	50	50	ENSMUST00000206539.2	ENSMUSG00000053158.11	Fes	chr7	protein_coding	feline sarcoma oncogene
chr7	80048676	80053020	-	80048676	80052278	5pMXE	0.25	50	50	ENSMUST00000122232.8	ENSMUSG00000030530.16	Furin	chr7	protein_coding	furin (paired basic amino acid cleaving enzyme)
chr7	80048676	80055067	-	80048676	80052278	5pMXE	0.25	50	50	ENSMUST00000122232.8	ENSMUSG00000030530.16	Furin	chr7	protein_coding	furin (paired basic amino acid cleaving enzyme)
chr7	80047720	80052278	-	80048676	80052278	A3SS&ES	0.5	50	50	ENSMUST00000122232.8	ENSMUSG00000030530.16	Furin	chr7	protein_coding	furin (paired basic amino acid cleaving enzyme)
chr7	80048676	80051175	-	80048676	80052278	A5SS	0.25	50	50	ENSMUST00000122232.8	ENSMUSG00000030530.16	Furin	chr7	protein_coding	furin (paired basic amino acid cleaving enzyme)
chr7	80048676	80051175	-	80048676	80055067	A5SS	0.25	50	50	ENSMUST00000107362.10	ENSMUSG00000030530.16	Furin	chr7	protein_coding	furin (paired basic amino acid cleaving enzyme)
chr7	80048676	80053020	-	80048676	80055067	A5SS	0.25	50	50	ENSMUST00000107362.10	ENSMUSG00000030530.16	Furin	chr7	protein_coding	furin (paired basic amino acid cleaving enzyme)
chr7	80048676	80053020	-	80048676	80051175	5pMXE	0.25	50	50	ENSMUST00000120753.3	ENSMUSG00000030530.16	Furin	chr7	protein_coding	furin (paired basic amino acid cleaving enzyme)
chr7	80108744;80110600	80110390;80113521	-	80108744	80113521	cassetteExon	0.5	100	100	ENSMUST00000206901.2	ENSMUSG00000030528.13	Blm	chr7	protein_coding	Bloom syndrome, RecQ like helicase
chr7	80108744;80110600	80110478;80113521	-	80108744	80113521	cassetteExon	0.5	100	100	ENSMUST00000206901.2	ENSMUSG00000030528.13	Blm	chr7	protein_coding	Bloom syndrome, RecQ like helicase
chr7	80105184	80106780	-	80105184	80108561	A5SS	0.5	50	50	ENSMUST00000206901.2	ENSMUSG00000030528.13	Blm	chr7	protein_coding	Bloom syndrome, RecQ like helicase
chr7	80108744	80110390	-	80108744	80110478	A5SS	0.33	50	50	ENSMUST00000081314.11	ENSMUSG00000030528.13	Blm	chr7	protein_coding	Bloom syndrome, RecQ like helicase
chr7	80116661	80117073	-	80116661	80119338	A5SS	0.5	50	50	ENSMUST00000081314.11	ENSMUSG00000030528.13	Blm	chr7	protein_coding	Bloom syndrome, RecQ like helicase
chr7	80164438	80184399	-	80164438	80184791	A5SS	0.5	50	50	ENSMUST00000081314.11	ENSMUSG00000030528.13	Blm	chr7	protein_coding	Bloom syndrome, RecQ like helicase
chr7	80108744	80113521	-	80108744	80110390	5pMXE	0.33	50	50	ENSMUST00000206989.2	ENSMUSG00000030528.13	Blm	chr7	protein_coding	Bloom syndrome, RecQ like helicase
chr7	80259680	80268342	-	80259680;80266313	80266213;80268342	ES	0.5	50	50	ENSMUST00000122255.8	ENSMUSG00000030527.16	Crtc3	chr7	protein_coding	CREB regulated transcription coactivator 3
chr7	80254148	80255496	-	80245656	80255496	A3SS	0.5	50	50	ENSMUST00000149176.2	ENSMUSG00000030527.16	Crtc3	chr7	protein_coding	CREB regulated transcription coactivator 3
chr7	80245656	80248495	-	80245656	80255496	A5SS	0.5	50	50	ENSMUST00000149176.2	ENSMUSG00000030527.16	Crtc3	chr7	protein_coding	CREB regulated transcription coactivator 3
chr7	80449697	80458796	-	80449697	80452889	5pMXE	0.5	50	50	ENSMUST00000167377.3	ENSMUSG00000030536.11	Iqgap1	chr7	protein_coding	IQ motif containing GTPase activating protein 1
chr7	80378829;80379439	80379392;80379817	-	80378829	80379817	cassetteExon	0.5	100	100	ENSMUST00000167377.3	ENSMUSG00000030536.11	Iqgap1	chr7	protein_coding	IQ motif containing GTPase activating protein 1
chr7	80458862	80471526	-	80458862	80466514	5pMXE	0.5	50	50	ENSMUST00000205813.2	ENSMUSG00000030536.11	Iqgap1	chr7	protein_coding	IQ motif containing GTPase activating protein 1
chr7	80401751	80402685	+	80401751	80406387	A3SS	0.5	50	50	ENSMUST00000206896.2	ENSMUSG00000108321.2	Gm44649	chr7	lncRNA	predicted gene 44649
chr7	80510825	80512916	+	80510825	80512913	A3SS	0.5	50	50	ENSMUST00000132163.8	ENSMUSG00000038797.14	Zscan2	chr7	protein_coding	zinc finger and SCAN domain containing 2
chr7	80512056	80512913	+	80510825	80512913	A5SS	0.5	50	50	ENSMUST00000132163.8	ENSMUSG00000038797.14	Zscan2	chr7	protein_coding	zinc finger and SCAN domain containing 2
chr7	80510825	80512916	+	80511082	80512916	A5SS	0.5	50	50	ENSMUST00000205361.2	ENSMUSG00000038797.14	Zscan2	chr7	protein_coding	zinc finger and SCAN domain containing 2
chr7	80547735	80550096	-	80547735;80548339	80548251;80550096	ES	0.5	50	50	ENSMUST00000026816.15	ENSMUSG00000025722.17	Wdr73	chr7	protein_coding	WD repeat domain 73
chr7	80543014	80543397	-	80543089	80543397	A3SS	0.5	50	50	ENSMUST00000026816.15	ENSMUSG00000025722.17	Wdr73	chr7	protein_coding	WD repeat domain 73
chr7	80550201	80550392	-	80550184	80550392	A3SS	0.5	50	50	ENSMUST00000026816.15	ENSMUSG00000025722.17	Wdr73	chr7	protein_coding	WD repeat domain 73
chr7	80550459	80550644	-	80550459	80550933	A5SS	0.5	50	50	ENSMUST00000026816.15	ENSMUSG00000025722.17	Wdr73	chr7	protein_coding	WD repeat domain 73
chr7	80552246	80553882	-	80552251	80553882	A3SS	0.5	50	50	ENSMUST00000146619.3	ENSMUSG00000025723.13	Nmb	chr7	protein_coding	neuromedin B
chr7	80565980;80572132	80572095;80572849	-	80565980	80572849	cassetteExon	0.5	100	100	ENSMUST00000147813.8	ENSMUSG00000025724.13	Sec11a	chr7	protein_coding	SEC11 homolog A, signal peptidase complex subunit
chr7	80557788	80565923	-	80554799	80565923	A3SS	0.33	50	50	ENSMUST00000147813.8	ENSMUSG00000025724.13	Sec11a	chr7	protein_coding	SEC11 homolog A, signal peptidase complex subunit
chr7	80565652	80565923	-	80554799	80565923	A3SS	0.33	50	50	ENSMUST00000147813.8	ENSMUSG00000025724.13	Sec11a	chr7	protein_coding	SEC11 homolog A, signal peptidase complex subunit
chr7	80584884	80597150	-	80572963	80597150	A3SS	0.5	50	50	ENSMUST00000147813.8	ENSMUSG00000025724.13	Sec11a	chr7	protein_coding	SEC11 homolog A, signal peptidase complex subunit
chr7	80572968;80575378	80575346;80577485	-	80572968	80577485	cassetteExon	0.5	100	100	ENSMUST00000120285.8	ENSMUSG00000025724.13	Sec11a	chr7	protein_coding	SEC11 homolog A, signal peptidase complex subunit
chr7	80565652	80565923	-	80557788	80565923	A3SS	0.33	50	50	ENSMUST00000120285.8	ENSMUSG00000025724.13	Sec11a	chr7	protein_coding	SEC11 homolog A, signal peptidase complex subunit
chr7	80572968	80577485	-	80572968	80575346	5pMXE	0.5	50	50	ENSMUST00000150049.8	ENSMUSG00000025724.13	Sec11a	chr7	protein_coding	SEC11 homolog A, signal peptidase complex subunit
chr7	80764729	80765271	+	80764625	80765271	A5SS	0.5	50	50	ENSMUST00000026820.11	ENSMUSG00000025726.12	Slc28a1	chr7	protein_coding	solute carrier family 28 (sodium-coupled nucleoside transporter), member 1
chr7	80958729;80959643	80959447;80964858	+	80958729	80964858	cassetteExon	0.5	100	100	ENSMUST00000026672.8	ENSMUSG00000025584.18	Pde8a	chr7	protein_coding	phosphodiesterase 8A
chr7	80958729;80964532	80964489;80964858	+	80958729	80964858	cassetteExon	0.5	100	100	ENSMUST00000026672.8	ENSMUSG00000025584.18	Pde8a	chr7	protein_coding	phosphodiesterase 8A
chr7	80958729;80959643	80959447;80964858	+	80958729;80964532	80964489;80964858	MXE	0.5	100	100	ENSMUST00000128154.8	ENSMUSG00000025584.18	Pde8a	chr7	protein_coding	phosphodiesterase 8A
chr7	80994164	80994687	-	80994164	80994605	A5SS	0.5	50	50	ENSMUST00000080813.5	ENSMUSG00000061787.16	Rps17	chr7	protein_coding	ribosomal protein S17
chr7	81086125	81104960	-	81086125	81104382	5pMXE	0.33	50	50	ENSMUST00000098331.10	ENSMUSG00000025586.18	Cpeb1	chr7	protein_coding	cytoplasmic polyadenylation element binding protein 1
chr7	81086125	81104981	-	81086125	81104382	5pMXE	0.33	50	50	ENSMUST00000098331.10	ENSMUSG00000025586.18	Cpeb1	chr7	protein_coding	cytoplasmic polyadenylation element binding protein 1
chr7	80999573	81000093	-	80999620	81000093	A3SS	0.5	50	50	ENSMUST00000098331.10	ENSMUSG00000025586.18	Cpeb1	chr7	protein_coding	cytoplasmic polyadenylation element binding protein 1
chr7	81021951	81085951	-	81021948	81085951	A3SS	0.5	50	50	ENSMUST00000098331.10	ENSMUSG00000025586.18	Cpeb1	chr7	protein_coding	cytoplasmic polyadenylation element binding protein 1
chr7	81005759	81006657	-	81005759	81006642	A5SS	0.5	50	50	ENSMUST00000098331.10	ENSMUSG00000025586.18	Cpeb1	chr7	protein_coding	cytoplasmic polyadenylation element binding protein 1
chr7	81021948	81022157	-	81021948	81085951	A5SS	0.5	50	50	ENSMUST00000098331.10	ENSMUSG00000025586.18	Cpeb1	chr7	protein_coding	cytoplasmic polyadenylation element binding protein 1
chr7	81086125	81104960	-	81086125	81104981	A5SS	0.33	50	50	ENSMUST00000135177.8	ENSMUSG00000025586.18	Cpeb1	chr7	protein_coding	cytoplasmic polyadenylation element binding protein 1
chr7	81127814	81134584	-	81127814;81134269	81134174;81134584	ES	0.5	50	50	ENSMUST00000082090.15	ENSMUSG00000062444.16	Ap3b2	chr7	protein_coding	adaptor-related protein complex 3, beta 2 subunit
chr7	81115513;81115835	81115779;81115919	-	81115513	81115919	cassetteExon	0.5	100	100	ENSMUST00000082090.15	ENSMUSG00000062444.16	Ap3b2	chr7	protein_coding	adaptor-related protein complex 3, beta 2 subunit
chr7	81129745	81134174	-	81127814	81134174	A3SS	0.5	50	50	ENSMUST00000082090.15	ENSMUSG00000062444.16	Ap3b2	chr7	protein_coding	adaptor-related protein complex 3, beta 2 subunit
chr7	81127814	81127962	-	81127814	81134174	A5SS	0.33	50	50	ENSMUST00000082090.15	ENSMUSG00000062444.16	Ap3b2	chr7	protein_coding	adaptor-related protein complex 3, beta 2 subunit
chr7	81134857	81139286	-	81134857	81143256	A5SS	0.5	50	50	ENSMUST00000082090.15	ENSMUSG00000062444.16	Ap3b2	chr7	protein_coding	adaptor-related protein complex 3, beta 2 subunit
chr7	81127814	81127962	-	81127814	81134584	A5SS	0.33	50	50	ENSMUST00000238711.2	ENSMUSG00000062444.16	Ap3b2	chr7	protein_coding	adaptor-related protein complex 3, beta 2 subunit
chr7	81145528	81146598	-	81145528;81145908	81145891;81146598	ES	0.5	50	50	ENSMUST00000073406.12	ENSMUSG00000061877.14	BC048679	chr7	protein_coding	cDNA sequence BC048679
chr7	81145121	81145327	-	81145003	81145327	A3SS	0.5	50	50	ENSMUST00000073406.12	ENSMUSG00000061877.14	BC048679	chr7	protein_coding	cDNA sequence BC048679
chr7	81173424	81179095	+	81173424	81178535	A3SS&ES	0.5	50	50	ENSMUST00000181903.8	ENSMUSG00000097277.8	2900076A07Rik	chr7	lncRNA	RIKEN cDNA 2900076A07 gene
chr7	81178688	81179095	+	81178688	81178905	A3SS	0.5	50	50	ENSMUST00000181903.8	ENSMUSG00000097277.8	2900076A07Rik	chr7	lncRNA	RIKEN cDNA 2900076A07 gene
chr7	81173471	81178535	+	81173424	81178535	A5SS	0.5	50	50	ENSMUST00000181903.8	ENSMUSG00000097277.8	2900076A07Rik	chr7	lncRNA	RIKEN cDNA 2900076A07 gene
chr7	81173424;81178688	81178535;81179095	+	81173424	81179095	cassetteExon	0.5	100	100	ENSMUST00000180385.2	ENSMUSG00000097277.8	2900076A07Rik	chr7	lncRNA	RIKEN cDNA 2900076A07 gene
chr7	81173424;81179006	81178535;81179095	+	81173424	81179095	cassetteExon	0.5	100	100	ENSMUST00000180385.2	ENSMUSG00000097277.8	2900076A07Rik	chr7	lncRNA	RIKEN cDNA 2900076A07 gene
chr7	81178688;81179006	81178905;81179095	+	81178688	81179095	cassetteExon	0.5	100	100	ENSMUST00000181164.8	ENSMUSG00000097277.8	2900076A07Rik	chr7	lncRNA	RIKEN cDNA 2900076A07 gene
chr7	81173424	81179095	+	81178688	81179095	A5SS&ES	0.33	50	50	ENSMUST00000181164.8	ENSMUSG00000097277.8	2900076A07Rik	chr7	lncRNA	RIKEN cDNA 2900076A07 gene
chr7	81221772	81224294	+	81221657	81224294	A5SS	0.5	50	50	ENSMUST00000207123.2	ENSMUSG00000045795.11	Whamm	chr7	protein_coding	WAS protein homolog associated with actin, golgi membranes and microtubules
chr7	81224467	81227899	+	81224450	81227899	A5SS	0.5	50	50	ENSMUST00000207123.2	ENSMUSG00000045795.11	Whamm	chr7	protein_coding	WAS protein homolog associated with actin, golgi membranes and microtubules
chr7	81299458	81356507	-	81299458	81342564	5pMXE	0.25	50	50	ENSMUST00000098326.3	ENSMUSG00000025813.15	Homer2	chr7	protein_coding	homer scaffolding protein 2
chr7	81299458	81357168	-	81299458	81342564	5pMXE	0.25	50	50	ENSMUST00000098326.3	ENSMUSG00000025813.15	Homer2	chr7	protein_coding	homer scaffolding protein 2
chr7	81299458;81338337	81338030;81342564	-	81299458	81342564	cassetteExon	0.5	100	100	ENSMUST00000098326.3	ENSMUSG00000025813.15	Homer2	chr7	protein_coding	homer scaffolding protein 2
chr7	81268430	81274000	-	81268463	81274000	A3SS	0.33	50	50	ENSMUST00000098326.3	ENSMUSG00000025813.15	Homer2	chr7	protein_coding	homer scaffolding protein 2
chr7	81268502	81274000	-	81268463	81274000	A3SS	0.33	50	50	ENSMUST00000098326.3	ENSMUSG00000025813.15	Homer2	chr7	protein_coding	homer scaffolding protein 2
chr7	81262119	81263931	-	81262119	81264091	A5SS	0.5	50	50	ENSMUST00000098326.3	ENSMUSG00000025813.15	Homer2	chr7	protein_coding	homer scaffolding protein 2
chr7	81299458	81357168	-	81299458	81356507	5pMXE	0.25	50	50	ENSMUST00000207983.2	ENSMUSG00000025813.15	Homer2	chr7	protein_coding	homer scaffolding protein 2
chr7	81299458	81338030	-	81299458	81356507	A5SS	0.25	50	50	ENSMUST00000207983.2	ENSMUSG00000025813.15	Homer2	chr7	protein_coding	homer scaffolding protein 2
chr7	81268502	81274000	-	81268430	81274000	A3SS	0.33	50	50	ENSMUST00000026922.15	ENSMUSG00000025813.15	Homer2	chr7	protein_coding	homer scaffolding protein 2
chr7	81299458	81338030	-	81299458	81357168	A5SS	0.25	50	50	ENSMUST00000207371.2	ENSMUSG00000025813.15	Homer2	chr7	protein_coding	homer scaffolding protein 2
chr7	81260301	81260645	+	81260102	81260645	A5SS	0.5	50	50	ENSMUST00000208858.2	ENSMUSG00000109194.2	Gm44570	chr7	lncRNA	predicted gene 44570
chr7	81413011	81417275	+	81412804	81417275	A5SS	0.33	50	50	ENSMUST00000042166.11	ENSMUSG00000038646.14	Ramac	chr7	protein_coding	RNA guanine-7 methyltransferase activating subunit
chr7	81413112	81417275	+	81412804	81417275	A5SS	0.33	50	50	ENSMUST00000042166.11	ENSMUSG00000038646.14	Ramac	chr7	protein_coding	RNA guanine-7 methyltransferase activating subunit
chr7	81413112	81417275	+	81413011	81417275	A5SS	0.33	50	50	ENSMUST00000133034.2	ENSMUSG00000038646.14	Ramac	chr7	protein_coding	RNA guanine-7 methyltransferase activating subunit
chr7	81438324	81438705	-	81438324	81439103	A5SS	0.25	50	50	ENSMUST00000026092.9	ENSMUSG00000025102.15	3110040N11Rik	chr7	protein_coding	RIKEN cDNA 3110040N11 gene
chr7	81438324	81439000	-	81438324	81439103	A5SS	0.25	50	50	ENSMUST00000026092.9	ENSMUSG00000025102.15	3110040N11Rik	chr7	protein_coding	RIKEN cDNA 3110040N11 gene
chr7	81438324	81439176	-	81438324	81439103	A5SS	0.25	50	50	ENSMUST00000026092.9	ENSMUSG00000025102.15	3110040N11Rik	chr7	protein_coding	RIKEN cDNA 3110040N11 gene
chr7	81438324	81438705	-	81438324	81439176	A5SS	0.25	50	50	ENSMUST00000142557.8	ENSMUSG00000025102.15	3110040N11Rik	chr7	protein_coding	RIKEN cDNA 3110040N11 gene
chr7	81438324	81439000	-	81438324	81439176	A5SS	0.25	50	50	ENSMUST00000142557.8	ENSMUSG00000025102.15	3110040N11Rik	chr7	protein_coding	RIKEN cDNA 3110040N11 gene
chr7	81438324	81439000	-	81438324	81438705	5pMXE	0.25	50	50	ENSMUST00000154937.8	ENSMUSG00000025102.15	3110040N11Rik	chr7	protein_coding	RIKEN cDNA 3110040N11 gene
chr7	81446831	81450133	-	81446831	81450706	A5SS	0.5	50	50	ENSMUST00000026093.9	ENSMUSG00000025103.9	Btbd1	chr7	protein_coding	BTB (POZ) domain containing 1
chr7	81455687	81478721	-	81455687	81465663	5pMXE	0.5	50	50	ENSMUST00000208178.2	ENSMUSG00000025103.9	Btbd1	chr7	protein_coding	BTB (POZ) domain containing 1
chr7	81468099	81478721	-	81455687	81478721	A3SS	0.5	50	50	ENSMUST00000208566.2	ENSMUSG00000025103.9	Btbd1	chr7	protein_coding	BTB (POZ) domain containing 1
chr7	81518492	81521117	+	81518492;81520527	81520445;81521117	ES	0.5	50	50	ENSMUST00000041890.8	ENSMUSG00000038623.10	Tm6sf1	chr7	protein_coding	transmembrane 6 superfamily member 1
chr7	81521238	81525472	+	81521238;81523584	81523480;81525472	ES	0.5	50	50	ENSMUST00000041890.8	ENSMUSG00000038623.10	Tm6sf1	chr7	protein_coding	transmembrane 6 superfamily member 1
chr7	81512466	81512898	+	81509288	81512898	A5SS	0.5	50	50	ENSMUST00000041890.8	ENSMUSG00000038623.10	Tm6sf1	chr7	protein_coding	transmembrane 6 superfamily member 1
chr7	81518492	81521117	+	81520527	81521117	5pMXE	0.5	50	50	ENSMUST00000147977.2	ENSMUSG00000038623.10	Tm6sf1	chr7	protein_coding	transmembrane 6 superfamily member 1
chr7	81521238	81525472	+	81523584	81525472	5pMXE	0.5	50	50	ENSMUST00000130006.2	ENSMUSG00000038623.10	Tm6sf1	chr7	protein_coding	transmembrane 6 superfamily member 1
chr7	81769893;81771141	81770835;81773226	+	81769893	81773226	cassetteExon	0.5	100	100	ENSMUST00000208138.2	ENSMUSG00000108868.2	Gm32850	chr7	lncRNA	predicted gene, 32850
chr7	81923202	81933263	+	81923202;81925493	81925335;81933263	ES	0.5	50	50	ENSMUST00000179318.8	ENSMUSG00000030638.14	Sh3gl3	chr7	protein_coding	SH3-domain GRB2-like 3
chr7	81909408	81917495	+	81909408	81917488	A3SS	0.5	50	50	ENSMUST00000179318.8	ENSMUSG00000030638.14	Sh3gl3	chr7	protein_coding	SH3-domain GRB2-like 3
chr7	81917560	81919988	+	81917560	81919981	A3SS	0.5	50	50	ENSMUST00000179318.8	ENSMUSG00000030638.14	Sh3gl3	chr7	protein_coding	SH3-domain GRB2-like 3
chr7	81824767	81909340	+	81823985	81909340	A5SS	0.33	50	50	ENSMUST00000179318.8	ENSMUSG00000030638.14	Sh3gl3	chr7	protein_coding	SH3-domain GRB2-like 3
chr7	81825064	81909340	+	81823985	81909340	A5SS	0.33	50	50	ENSMUST00000179318.8	ENSMUSG00000030638.14	Sh3gl3	chr7	protein_coding	SH3-domain GRB2-like 3
chr7	81925493	81955998	+	81925493	81933263	3pMXE	0.5	50	50	ENSMUST00000180183.8	ENSMUSG00000030638.14	Sh3gl3	chr7	protein_coding	SH3-domain GRB2-like 3
chr7	81825064	81909340	+	81824767	81909340	A5SS	0.33	50	50	ENSMUST00000032874.14	ENSMUSG00000030638.14	Sh3gl3	chr7	protein_coding	SH3-domain GRB2-like 3
chr7	81825064	81825191	+	81825064	81909340	A3SS	0.5	50	50	ENSMUST00000180243.8	ENSMUSG00000030638.14	Sh3gl3	chr7	protein_coding	SH3-domain GRB2-like 3
chr7	81923202	81933263	+	81923202	81925335	A3SS&ES	0.5	50	50	ENSMUST00000178526.2	ENSMUSG00000030638.14	Sh3gl3	chr7	protein_coding	SH3-domain GRB2-like 3
chr7	81934338	81955998	+	81925493	81955998	A5SS	0.5	50	50	ENSMUST00000178526.2	ENSMUSG00000030638.14	Sh3gl3	chr7	protein_coding	SH3-domain GRB2-like 3
chr7	81986494	82028701	+	81986494	81989112	3pMXE	0.5	50	50	ENSMUST00000172490.2	ENSMUSG00000070469.13	Adamtsl3	chr7	protein_coding	ADAMTS-like 3
chr7	82057834	82077542	+	82028820	82077542	A5SS	0.5	50	50	ENSMUST00000173287.8	ENSMUSG00000070469.13	Adamtsl3	chr7	protein_coding	ADAMTS-like 3
chr7	82261098	82261600	+	82261081	82261600	A5SS	0.5	50	50	ENSMUST00000173287.8	ENSMUSG00000070469.13	Adamtsl3	chr7	protein_coding	ADAMTS-like 3
chr7	82284615;82295037	82294858;82297600	-	82284615;82293057	82292855;82297600	MXE	0.5	100	100	ENSMUST00000056728.5	ENSMUSG00000038570.16	Saxo2	chr7	protein_coding	stabilizer of axonemal microtubules 2
chr7	82293057;82295037	82294858;82297600	-	82293057	82297600	cassetteExon	0.5	100	100	ENSMUST00000056728.5	ENSMUSG00000038570.16	Saxo2	chr7	protein_coding	stabilizer of axonemal microtubules 2
chr7	82284615;82295054	82294858;82297600	-	82284615;82293057	82292855;82297600	MXE	0.5	100	100	ENSMUST00000056728.5	ENSMUSG00000038570.16	Saxo2	chr7	protein_coding	stabilizer of axonemal microtubules 2
chr7	82293057;82295054	82294858;82297600	-	82293057	82297600	cassetteExon	0.5	100	100	ENSMUST00000056728.5	ENSMUSG00000038570.16	Saxo2	chr7	protein_coding	stabilizer of axonemal microtubules 2
chr7	82295668	82297600	-	82293057	82297600	A3SS	0.25	50	50	ENSMUST00000056728.5	ENSMUSG00000038570.16	Saxo2	chr7	protein_coding	stabilizer of axonemal microtubules 2
chr7	82284615;82293057	82292855;82294858	-	82284615	82294858	cassetteExon	0.5	100	100	ENSMUST00000207693.2	ENSMUSG00000038570.16	Saxo2	chr7	protein_coding	stabilizer of axonemal microtubules 2
chr7	82295037	82297600	-	82295054	82297600	A3SS	0.25	50	50	ENSMUST00000207693.2	ENSMUSG00000038570.16	Saxo2	chr7	protein_coding	stabilizer of axonemal microtubules 2
chr7	82295668	82297600	-	82295054	82297600	A3SS	0.25	50	50	ENSMUST00000207693.2	ENSMUSG00000038570.16	Saxo2	chr7	protein_coding	stabilizer of axonemal microtubules 2
chr7	82295668	82297600	-	82295037	82297600	A3SS	0.25	50	50	ENSMUST00000156720.8	ENSMUSG00000038570.16	Saxo2	chr7	protein_coding	stabilizer of axonemal microtubules 2
chr7	82284615	82294858	-	82293057	82294858	3pMXE	0.5	50	50	ENSMUST00000151632.8	ENSMUSG00000038570.16	Saxo2	chr7	protein_coding	stabilizer of axonemal microtubules 2
chr7	82297886	82298734	+	82297857	82298734	A5SS	0.5	50	50	ENSMUST00000141726.8	ENSMUSG00000038563.15	Efl1	chr7	protein_coding	elongation factor like GTPase 1
chr7	82319530	82320813	+	82307349	82320813	A5SS	0.5	50	50	ENSMUST00000141726.8	ENSMUSG00000038563.15	Efl1	chr7	protein_coding	elongation factor like GTPase 1
chr7	82507644	82508127	+	82507644	82509010	A3SS	0.33	50	50	ENSMUST00000179662.8	ENSMUSG00000030636.16	1700010L04Rik	chr7	lncRNA	RIKEN cDNA 1700010L04 gene
chr7	82507644	82508513	+	82507644	82509010	A3SS	0.33	50	50	ENSMUST00000179662.8	ENSMUSG00000030636.16	1700010L04Rik	chr7	lncRNA	RIKEN cDNA 1700010L04 gene
chr7	82505509	82506592	+	82503269	82506592	A5SS	0.5	50	50	ENSMUST00000179662.8	ENSMUSG00000030636.16	1700010L04Rik	chr7	lncRNA	RIKEN cDNA 1700010L04 gene
chr7	82505509	82505599	+	82505509	82506592	A3SS	0.5	50	50	ENSMUST00000178848.6	ENSMUSG00000030636.16	1700010L04Rik	chr7	lncRNA	RIKEN cDNA 1700010L04 gene
chr7	82507644	82508127	+	82507644	82508513	A3SS	0.33	50	50	ENSMUST00000178848.6	ENSMUSG00000030636.16	1700010L04Rik	chr7	lncRNA	RIKEN cDNA 1700010L04 gene
chr7	82734230	82804385	+	82711315	82804385	A5SS	0.33	50	50	ENSMUST00000208611.2	ENSMUSG00000053528.7	A530021J07Rik	chr7	lncRNA	Riken cDNA A530021J07 gene
chr7	82798411	82804385	+	82711315	82804385	A5SS	0.33	50	50	ENSMUST00000208611.2	ENSMUSG00000053528.7	A530021J07Rik	chr7	lncRNA	Riken cDNA A530021J07 gene
chr7	82798411	82804385	+	82734230	82804385	A5SS	0.33	50	50	ENSMUST00000208699.2	ENSMUSG00000053528.7	A530021J07Rik	chr7	lncRNA	Riken cDNA A530021J07 gene
chr7	82990813	83005679	-	82990813;82994088	82993921;83005679	ES	0.5	50	50	ENSMUST00000208251.2	ENSMUSG00000109506.2	Gm44724	chr7	lncRNA	predicted gene 44724
chr7	83192315;83194656	83194553;83197941	-	83192315	83197941	cassetteExon	0.5	100	100	ENSMUST00000207184.2	ENSMUSG00000094841.3	Gm10610	chr7	lncRNA	predicted gene 10610
chr7	83265191	83265941	+	83265188	83265941	A5SS	0.5	50	50	ENSMUST00000163297.8	ENSMUSG00000038540.15	Tmc3	chr7	protein_coding	transmembrane channel-like gene family 3
chr7	83267379	83269107	+	83267379;83267830	83267744;83269107	ES	0.5	50	50	ENSMUST00000039317.14	ENSMUSG00000038540.15	Tmc3	chr7	protein_coding	transmembrane channel-like gene family 3
chr7	83275082	83279974	-	83261595	83279974	A3SS	0.5	50	50	ENSMUST00000148687.2	ENSMUSG00000087088.3	Gm16638	chr7	lncRNA	predicted gene, 16638
chr7	83281347	83282338	+	83281347;83281993	83281944;83282338	ES	0.5	50	50	ENSMUST00000075418.15	ENSMUSG00000046027.18	Stard5	chr7	protein_coding	StAR-related lipid transfer (START) domain containing 5
chr7	83286905	83293649	+	83286905	83289630	3pMXE	0.5	50	50	ENSMUST00000075418.15	ENSMUSG00000046027.18	Stard5	chr7	protein_coding	StAR-related lipid transfer (START) domain containing 5
chr7	83281853	83281944	+	83281347	83281944	A5SS	0.5	50	50	ENSMUST00000075418.15	ENSMUSG00000046027.18	Stard5	chr7	protein_coding	StAR-related lipid transfer (START) domain containing 5
chr7	83371905	83388986	-	83371905	83384606	5pMXE	0.25	50	50	ENSMUST00000001792.12	ENSMUSG00000001741.13	Il16	chr7	protein_coding	interleukin 16
chr7	83371905	83394885	-	83371905	83384606	5pMXE	0.25	50	50	ENSMUST00000001792.12	ENSMUSG00000001741.13	Il16	chr7	protein_coding	interleukin 16
chr7	83327309;83328726	83328653;83329833	-	83327309	83329833	cassetteExon	0.5	100	100	ENSMUST00000001792.12	ENSMUSG00000001741.13	Il16	chr7	protein_coding	interleukin 16
chr7	83330543	83332024	-	83329943	83332024	A3SS	0.5	50	50	ENSMUST00000001792.12	ENSMUSG00000001741.13	Il16	chr7	protein_coding	interleukin 16
chr7	83371905	83381272	-	83371905	83384606	A5SS	0.25	50	50	ENSMUST00000001792.12	ENSMUSG00000001741.13	Il16	chr7	protein_coding	interleukin 16
chr7	83371905	83381272	-	83371905	83394885	A5SS	0.25	50	50	ENSMUST00000153560.2	ENSMUSG00000001741.13	Il16	chr7	protein_coding	interleukin 16
chr7	83371905	83388986	-	83371905	83394885	A5SS	0.25	50	50	ENSMUST00000153560.2	ENSMUSG00000001741.13	Il16	chr7	protein_coding	interleukin 16
chr7	83371905	83388986	-	83371905	83381272	5pMXE	0.25	50	50	ENSMUST00000131916.2	ENSMUSG00000001741.13	Il16	chr7	protein_coding	interleukin 16
chr7	83425370	83426278	-	83425370	83426200	A5SS	0.5	50	50	ENSMUST00000119134.8	ENSMUSG00000011154.18	Cfap161	chr7	protein_coding	cilia and flagella associated protein 161
chr7	83429530	83433048	-	83429530	83440840	A5SS	0.5	50	50	ENSMUST00000119134.8	ENSMUSG00000011154.18	Cfap161	chr7	protein_coding	cilia and flagella associated protein 161
chr7	83541683	83544738	+	83533863	83544738	A5SS	0.33	50	50	ENSMUST00000138803.8	ENSMUSG00000038503.16	Mesd	chr7	protein_coding	mesoderm development LRP chaperone
chr7	83542082	83544738	+	83533863	83544738	A5SS	0.33	50	50	ENSMUST00000138803.8	ENSMUSG00000038503.16	Mesd	chr7	protein_coding	mesoderm development LRP chaperone
chr7	83542082	83544738	+	83541683	83544738	A5SS	0.33	50	50	ENSMUST00000094215.10	ENSMUSG00000038503.16	Mesd	chr7	protein_coding	mesoderm development LRP chaperone
chr7	83624423	83625258	-	83624423	83631400	A5SS	0.5	50	50	ENSMUST00000064174.12	ENSMUSG00000052353.14	Cemip	chr7	protein_coding	cell migration inducing protein, hyaluronan binding
chr7	83763638	83785267	-	83763638	83800490	A5SS	0.5	50	50	ENSMUST00000117085.2	ENSMUSG00000038459.11	Abhd17c	chr7	protein_coding	abhydrolase domain containing 17C
chr7	83801892	83838200	+	83801892	83802648	3pMXE	0.5	50	50	ENSMUST00000208101.2	ENSMUSG00000097016.3	Gm26708	chr7	lncRNA	predicted gene, 26708
chr7	83838377	83843228	+	83838377;83841398	83841271;83843228	ES	0.5	50	50	ENSMUST00000208236.2	ENSMUSG00000097016.3	Gm26708	chr7	lncRNA	predicted gene, 26708
chr7	84010876;84021855	84021576;84059063	-	84010876	84059063	cassetteExon	0.5	100	100	ENSMUST00000085077.5	ENSMUSG00000015709.10	Arnt2	chr7	protein_coding	aryl hydrocarbon receptor nuclear translocator 2
chr7	84010876;84021855	84021731;84059063	-	84010876	84059063	cassetteExon	0.5	100	100	ENSMUST00000085077.5	ENSMUSG00000015709.10	Arnt2	chr7	protein_coding	aryl hydrocarbon receptor nuclear translocator 2
chr7	83911746	83912387	-	83911751	83912387	A3SS	0.5	50	50	ENSMUST00000085077.5	ENSMUSG00000015709.10	Arnt2	chr7	protein_coding	aryl hydrocarbon receptor nuclear translocator 2
chr7	83996751	84003728	-	83996763	84003728	A3SS	0.5	50	50	ENSMUST00000085077.5	ENSMUSG00000015709.10	Arnt2	chr7	protein_coding	aryl hydrocarbon receptor nuclear translocator 2
chr7	83912525	83912807	-	83912525	83914783	A5SS	0.5	50	50	ENSMUST00000085077.5	ENSMUSG00000015709.10	Arnt2	chr7	protein_coding	aryl hydrocarbon receptor nuclear translocator 2
chr7	83931379	83931482	-	83931379	83933201	A5SS	0.33	50	50	ENSMUST00000085077.5	ENSMUSG00000015709.10	Arnt2	chr7	protein_coding	aryl hydrocarbon receptor nuclear translocator 2
chr7	83931379	83933144	-	83931379	83933201	A5SS	0.33	50	50	ENSMUST00000085077.5	ENSMUSG00000015709.10	Arnt2	chr7	protein_coding	aryl hydrocarbon receptor nuclear translocator 2
chr7	83960183	83960328	-	83960183	83992950	A5SS	0.5	50	50	ENSMUST00000085077.5	ENSMUSG00000015709.10	Arnt2	chr7	protein_coding	aryl hydrocarbon receptor nuclear translocator 2
chr7	84010876	84016452	-	84010876	84059063	A5SS	0.25	50	50	ENSMUST00000085077.5	ENSMUSG00000015709.10	Arnt2	chr7	protein_coding	aryl hydrocarbon receptor nuclear translocator 2
chr7	84010876	84059063	-	84010876	84021576	5pMXE	0.25	50	50	ENSMUST00000208232.2	ENSMUSG00000015709.10	Arnt2	chr7	protein_coding	aryl hydrocarbon receptor nuclear translocator 2
chr7	84010876	84016452	-	84010876	84021576	A5SS	0.25	50	50	ENSMUST00000208232.2	ENSMUSG00000015709.10	Arnt2	chr7	protein_coding	aryl hydrocarbon receptor nuclear translocator 2
chr7	84010876	84021731	-	84010876	84021576	A5SS	0.25	50	50	ENSMUST00000208232.2	ENSMUSG00000015709.10	Arnt2	chr7	protein_coding	aryl hydrocarbon receptor nuclear translocator 2
chr7	83931379	83931482	-	83931379	83933144	A5SS	0.33	50	50	ENSMUST00000208129.2	ENSMUSG00000015709.10	Arnt2	chr7	protein_coding	aryl hydrocarbon receptor nuclear translocator 2
chr7	84010876	84021731	-	84010876;84021638	84021576;84021731	ES	0.5	50	50	ENSMUST00000208995.2	ENSMUSG00000015709.10	Arnt2	chr7	protein_coding	aryl hydrocarbon receptor nuclear translocator 2
chr7	84010876	84059063	-	84010876	84021731	5pMXE	0.25	50	50	ENSMUST00000208863.2	ENSMUSG00000015709.10	Arnt2	chr7	protein_coding	aryl hydrocarbon receptor nuclear translocator 2
chr7	84010876	84016452	-	84010876	84021731	A5SS	0.25	50	50	ENSMUST00000208863.2	ENSMUSG00000015709.10	Arnt2	chr7	protein_coding	aryl hydrocarbon receptor nuclear translocator 2
chr7	84178397;84215955	84215671;84224913	+	84178397	84224913	cassetteExon	0.5	100	100	ENSMUST00000180387.3	ENSMUSG00000097789.3	Gm2115	chr7	protein_coding	predicted gene 2115
chr7	84246483	84249985	-	84246483;84248352	84248262;84249985	ES	0.5	50	50	ENSMUST00000032865.17	ENSMUSG00000030630.17	Fah	chr7	protein_coding	fumarylacetoacetate hydrolase
chr7	84251399	84255758	-	84251399	84254851	5pMXE	0.5	50	50	ENSMUST00000032865.17	ENSMUSG00000030630.17	Fah	chr7	protein_coding	fumarylacetoacetate hydrolase
chr7	84250362	84251242	-	84250362	84251289	A5SS	0.5	50	50	ENSMUST00000032865.17	ENSMUSG00000030630.17	Fah	chr7	protein_coding	fumarylacetoacetate hydrolase
chr7	84283617;84291645	84291494;84338954	-	84283617	84338954	cassetteExon	0.5	100	100	ENSMUST00000209117.2	ENSMUSG00000030629.16	Zfand6	chr7	protein_coding	zinc finger, AN1-type domain 6
chr7	84283617;84302250	84302090;84338954	-	84283617	84338954	cassetteExon	0.5	100	100	ENSMUST00000209117.2	ENSMUSG00000030629.16	Zfand6	chr7	protein_coding	zinc finger, AN1-type domain 6
chr7	84283198	84283447	-	84283201	84283447	A3SS	0.5	50	50	ENSMUST00000209117.2	ENSMUSG00000030629.16	Zfand6	chr7	protein_coding	zinc finger, AN1-type domain 6
chr7	84283617	84328518	-	84283617	84338954	A5SS	0.2	50	50	ENSMUST00000209117.2	ENSMUSG00000030629.16	Zfand6	chr7	protein_coding	zinc finger, AN1-type domain 6
chr7	84283617	84328552	-	84283617	84338954	A5SS	0.2	50	50	ENSMUST00000209117.2	ENSMUSG00000030629.16	Zfand6	chr7	protein_coding	zinc finger, AN1-type domain 6
chr7	84283617	84328518	-	84283617;84302250	84302090;84328518	ES	0.33	50	50	ENSMUST00000069537.3	ENSMUSG00000030629.16	Zfand6	chr7	protein_coding	zinc finger, AN1-type domain 6
chr7	84302250	84338954	-	84302250	84328518	5pMXE	0.5	50	50	ENSMUST00000069537.3	ENSMUSG00000030629.16	Zfand6	chr7	protein_coding	zinc finger, AN1-type domain 6
chr7	84283617;84291645	84291494;84328518	-	84283617;84302250	84302090;84328518	MXE	0.5	100	100	ENSMUST00000069537.3	ENSMUSG00000030629.16	Zfand6	chr7	protein_coding	zinc finger, AN1-type domain 6
chr7	84283617	84328552	-	84283617	84302090	A5SS&ES	0.25	50	50	ENSMUST00000069537.3	ENSMUSG00000030629.16	Zfand6	chr7	protein_coding	zinc finger, AN1-type domain 6
chr7	84283617;84291645	84291494;84328518	-	84283617	84328518	cassetteExon	0.5	100	100	ENSMUST00000178385.9	ENSMUSG00000030629.16	Zfand6	chr7	protein_coding	zinc finger, AN1-type domain 6
chr7	84283617	84328552	-	84283617	84328518	A5SS	0.2	50	50	ENSMUST00000178385.9	ENSMUSG00000030629.16	Zfand6	chr7	protein_coding	zinc finger, AN1-type domain 6
chr7	84283617;84291645	84291494;84338954	-	84283617;84302250	84302090;84338954	MXE	0.5	100	100	ENSMUST00000209165.2	ENSMUSG00000030629.16	Zfand6	chr7	protein_coding	zinc finger, AN1-type domain 6
chr7	84283617	84328518	-	84283617	84302090	A5SS&ES	0.2	50	50	ENSMUST00000209165.2	ENSMUSG00000030629.16	Zfand6	chr7	protein_coding	zinc finger, AN1-type domain 6
chr7	84291645	84338954	-	84291645	84328518	5pMXE	0.5	50	50	ENSMUST00000207865.2	ENSMUSG00000030629.16	Zfand6	chr7	protein_coding	zinc finger, AN1-type domain 6
chr7	84283617	84328552	-	84283617	84291494	A5SS&ES	0.25	50	50	ENSMUST00000207865.2	ENSMUSG00000030629.16	Zfand6	chr7	protein_coding	zinc finger, AN1-type domain 6
chr7	84283617	84328518	-	84283617	84291494	A5SS&ES	0.2	50	50	ENSMUST00000207975.2	ENSMUSG00000030629.16	Zfand6	chr7	protein_coding	zinc finger, AN1-type domain 6
chr7	84414502	84428163	+	84414502	84424423	3pMXE	0.5	50	50	ENSMUST00000129059.3	ENSMUSG00000085236.4	2610206C17Rik	chr7	lncRNA	RIKEN cDNA 2610206C17 gene
chr7	84402435	84414083	+	84386347	84414083	A5SS	0.5	50	50	ENSMUST00000129059.3	ENSMUSG00000085236.4	2610206C17Rik	chr7	lncRNA	RIKEN cDNA 2610206C17 gene
chr7	84562361;84563751	84563724;84564967	+	84562361	84564967	cassetteExon	0.5	100	100	ENSMUST00000216367.2	ENSMUSG00000070459.7	Olfr290	chr7	protein_coding	olfactory receptor 290
chr7	84592930	84596580	-	84592930;84596208	84595408;84596580	ES	0.5	50	50	ENSMUST00000044583.10	ENSMUSG00000066372.7	Vmn2r65	chr7	protein_coding	vomeronasal 2, receptor 65
chr7	84598392	84613024	-	84596859	84613024	A3SS	0.5	50	50	ENSMUST00000044583.10	ENSMUSG00000066372.7	Vmn2r65	chr7	protein_coding	vomeronasal 2, receptor 65
chr7	84596859	84597715	-	84596859	84613024	A5SS	0.5	50	50	ENSMUST00000044583.10	ENSMUSG00000066372.7	Vmn2r65	chr7	protein_coding	vomeronasal 2, receptor 65
chr7	84596859	84613024	-	84596859;84598392	84597715;84613024	ES	0.5	50	50	ENSMUST00000232823.2	ENSMUSG00000066372.7	Vmn2r65	chr7	protein_coding	vomeronasal 2, receptor 65
chr7	84592930	84596580	-	84596208	84596580	A3SS	0.5	50	50	ENSMUST00000233024.2	ENSMUSG00000066372.7	Vmn2r65	chr7	protein_coding	vomeronasal 2, receptor 65
chr7	84592930	84595408	-	84592930	84596580	A5SS	0.5	50	50	ENSMUST00000233469.2	ENSMUSG00000066372.7	Vmn2r65	chr7	protein_coding	vomeronasal 2, receptor 65
chr7	84657156	84661032	-	84657206	84661032	A3SS	0.5	50	50	ENSMUST00000124773.3	ENSMUSG00000094950.3	Vmn2r66	chr7	protein_coding	vomeronasal 2, receptor 66
chr7	84644772	84654301	-	84644772	84654322	A5SS	0.5	50	50	ENSMUST00000124773.3	ENSMUSG00000094950.3	Vmn2r66	chr7	protein_coding	vomeronasal 2, receptor 66
chr7	84801457	84801823	-	84801394	84801823	A3SS	0.5	50	50	ENSMUST00000233789.2	ENSMUSG00000095664.3	Vmn2r67	chr7	protein_coding	vomeronasal 2, receptor 67
chr7	84799952	84800651	-	84799952	84801183	A5SS	0.5	50	50	ENSMUST00000233789.2	ENSMUSG00000095664.3	Vmn2r67	chr7	protein_coding	vomeronasal 2, receptor 67
chr7	85054204	85058924	-	85056500	85058924	A3SS	0.5	50	50	ENSMUST00000171213.3	ENSMUSG00000091006.4	Vmn2r69	chr7	protein_coding	vomeronasal 2, receptor 69
chr7	85061258	85061496	-	85061105	85061496	A3SS	0.5	50	50	ENSMUST00000171213.3	ENSMUSG00000091006.4	Vmn2r69	chr7	protein_coding	vomeronasal 2, receptor 69
chr7	85056500	85058292	-	85056500	85058924	A5SS	0.5	50	50	ENSMUST00000171213.3	ENSMUSG00000091006.4	Vmn2r69	chr7	protein_coding	vomeronasal 2, receptor 69
chr7	85214664	85215056	-	85214664	85215047	A5SS	0.5	50	50	ENSMUST00000168230.3	ENSMUSG00000090806.3	Vmn2r70	chr7	protein_coding	vomeronasal 2, receptor 70
chr7	85223922	85267745	+	85237228	85267745	A5SS&ES	0.33	50	50	ENSMUST00000208545.3	ENSMUSG00000091205.4	Vmn2r71	chr7	protein_coding	vomeronasal 2, receptor 71
chr7	85264866	85267745	+	85237228	85267745	A5SS	0.33	50	50	ENSMUST00000208545.3	ENSMUSG00000091205.4	Vmn2r71	chr7	protein_coding	vomeronasal 2, receptor 71
chr7	85269094	85269787	+	85268024	85269787	A5SS	0.5	50	50	ENSMUST00000208545.3	ENSMUSG00000091205.4	Vmn2r71	chr7	protein_coding	vomeronasal 2, receptor 71
chr7	85264866	85267745	+	85223922	85267745	A5SS	0.33	50	50	ENSMUST00000208273.2	ENSMUSG00000091205.4	Vmn2r71	chr7	protein_coding	vomeronasal 2, receptor 71
chr7	85387911;85395241	85395043;85398328	-	85387911	85398328	cassetteExon	0.5	100	100	ENSMUST00000063425.9	ENSMUSG00000051877.9	Vmn2r72	chr7	protein_coding	vomeronasal 2, receptor 72
chr7	85401239	85403993	-	85401239	85404012	A5SS	0.5	50	50	ENSMUST00000063425.9	ENSMUSG00000051877.9	Vmn2r72	chr7	protein_coding	vomeronasal 2, receptor 72
chr7	85519105	85520680	-	85519105;85519669	85519442;85520680	ES	0.5	50	50	ENSMUST00000077478.8	ENSMUSG00000070458.6	Vmn2r73	chr7	protein_coding	vomeronasal 2, receptor 73
chr7	85507671;85509869	85509836;85518982	-	85507671	85518982	cassetteExon	0.5	100	100	ENSMUST00000077478.8	ENSMUSG00000070458.6	Vmn2r73	chr7	protein_coding	vomeronasal 2, receptor 73
chr7	85521426	85521861	-	85521489	85521861	A3SS	0.5	50	50	ENSMUST00000077478.8	ENSMUSG00000070458.6	Vmn2r73	chr7	protein_coding	vomeronasal 2, receptor 73
chr7	85607524	85610494	-	85607524;85608681	85608487;85610494	ES	0.5	50	50	ENSMUST00000233635.2	ENSMUSG00000090774.3	Vmn2r74	chr7	protein_coding	vomeronasal 2, receptor 74
chr7	85606858	85607245	-	85606858	85607236	A5SS	0.5	50	50	ENSMUST00000233635.2	ENSMUSG00000090774.3	Vmn2r74	chr7	protein_coding	vomeronasal 2, receptor 74
chr7	85606795	85607245	-	85606858	85607245	A3SS	0.5	50	50	ENSMUST00000232886.2	ENSMUSG00000090774.3	Vmn2r74	chr7	protein_coding	vomeronasal 2, receptor 74
chr7	85878093	85880190	-	85878093;85879803	85878997;85880190	ES	0.33	50	50	ENSMUST00000233075.2	ENSMUSG00000091239.3	Vmn2r76	chr7	protein_coding	vomeronasal 2, receptor 76
chr7	85880478;85889851	85889583;85895204	-	85880478	85895204	cassetteExon	0.5	100	100	ENSMUST00000233075.2	ENSMUSG00000091239.3	Vmn2r76	chr7	protein_coding	vomeronasal 2, receptor 76
chr7	85864067	85877388	-	85860973	85877388	A3SS	0.33	50	50	ENSMUST00000233075.2	ENSMUSG00000091239.3	Vmn2r76	chr7	protein_coding	vomeronasal 2, receptor 76
chr7	85875321	85877388	-	85860973	85877388	A3SS	0.33	50	50	ENSMUST00000233075.2	ENSMUSG00000091239.3	Vmn2r76	chr7	protein_coding	vomeronasal 2, receptor 76
chr7	85879194	85880190	-	85879803	85880190	A3SS	0.33	50	50	ENSMUST00000233075.2	ENSMUSG00000091239.3	Vmn2r76	chr7	protein_coding	vomeronasal 2, receptor 76
chr7	85864067	85877388	-	85875321	85877388	A3SS	0.33	50	50	ENSMUST00000233317.2	ENSMUSG00000091239.3	Vmn2r76	chr7	protein_coding	vomeronasal 2, receptor 76
chr7	85878093	85880190	-	85878093	85878997	A5SS	0.5	50	50	ENSMUST00000233211.2	ENSMUSG00000091239.3	Vmn2r76	chr7	protein_coding	vomeronasal 2, receptor 76
chr7	85878093;85879194	85878997;85880190	-	85878093	85880190	cassetteExon	0.5	100	100	ENSMUST00000232799.2	ENSMUSG00000091239.3	Vmn2r76	chr7	protein_coding	vomeronasal 2, receptor 76
chr7	85879803	85880190	-	85878093	85880190	A3SS	0.33	50	50	ENSMUST00000232799.2	ENSMUSG00000091239.3	Vmn2r76	chr7	protein_coding	vomeronasal 2, receptor 76
chr7	85970836	85974499	-	85972076	85974499	A3SS	0.5	50	50	ENSMUST00000214977.2	ENSMUSG00000054498.7	Olfr308	chr7	protein_coding	olfactory receptor 308
chr7	85985621	85986518	-	85985624	85986518	A3SS	0.5	50	50	ENSMUST00000213705.2	ENSMUSG00000055610.6	Olfr307	chr7	protein_coding	olfactory receptor 307
chr7	86013562	86016108	-	86013562	86015798	5pMXE	0.33	50	50	ENSMUST00000213255.2	ENSMUSG00000055571.5	Olfr305	chr7	protein_coding	olfactory receptor 305
chr7	86013562	86015813	-	86013562	86015798	A5SS	0.33	50	50	ENSMUST00000213255.2	ENSMUSG00000055571.5	Olfr305	chr7	protein_coding	olfactory receptor 305
chr7	86013562	86016108	-	86013562	86015813	5pMXE	0.33	50	50	ENSMUST00000216700.2	ENSMUSG00000055571.5	Olfr305	chr7	protein_coding	olfactory receptor 305
chr7	86044837	86046712	-	86044837	86046607	5pMXE	0.5	50	50	ENSMUST00000215733.2	ENSMUSG00000039608.7	Olfr303	chr7	protein_coding	olfactory receptor 303
chr7	86043233	86043694	-	86043233	86043721	A5SS	0.5	50	50	ENSMUST00000215532.2	ENSMUSG00000039608.7	Olfr303	chr7	protein_coding	olfactory receptor 303
chr7	86138775	86141665	-	86138775	86140997	A5SS&ES	0.5	50	50	ENSMUST00000217110.2	ENSMUSG00000062878.4	Olfr298	chr7	protein_coding	olfactory receptor 298
chr7	86141173	86141665	-	86141173	86141561	A5SS	0.5	50	50	ENSMUST00000217110.2	ENSMUSG00000062878.4	Olfr298	chr7	protein_coding	olfactory receptor 298
chr7	86138775;86141173	86140997;86141665	-	86138775	86141665	cassetteExon	0.5	100	100	ENSMUST00000213223.2	ENSMUSG00000062878.4	Olfr298	chr7	protein_coding	olfactory receptor 298
chr7	86298391	86306546	+	86298391;86302060	86301892;86306546	ES	0.5	50	50	ENSMUST00000214401.3	ENSMUSG00000063394.4	Olfr293	chr7	protein_coding	olfactory receptor 293
chr7	86395405	86406146	-	86395405;86396091	86395993;86406146	ES	0.5	50	50	ENSMUST00000001824.7	ENSMUSG00000001773.15	Folh1	chr7	protein_coding	folate hydrolase 1
chr7	86395405	86406146	-	86396091	86406146	3pMXE	0.5	50	50	ENSMUST00000209082.2	ENSMUSG00000001773.15	Folh1	chr7	protein_coding	folate hydrolase 1
chr7	86444554	86450602	+	86444554;86450241	86449962;86450602	ES	0.5	50	50	ENSMUST00000233099.2	ENSMUSG00000090949.3	Vmn2r77	chr7	protein_coding	vomeronasal 2, receptor 77
chr7	86444554	86450060	+	86444554	86449962	A3SS	0.33	50	50	ENSMUST00000233099.2	ENSMUSG00000090949.3	Vmn2r77	chr7	protein_coding	vomeronasal 2, receptor 77
chr7	86444554;86450241	86450060;86450602	+	86444554	86450602	cassetteExon	0.5	100	100	ENSMUST00000233167.2	ENSMUSG00000090949.3	Vmn2r77	chr7	protein_coding	vomeronasal 2, receptor 77
chr7	86515856	86534077	+	86515856;86533502	86533400;86534077	ES	0.5	50	50	ENSMUST00000236022.2	ENSMUSG00000092195.3	Vmn2r-ps87	chr7	transcribed_unprocessed_pseudogene	vomeronasal 2, receptor, pseudogene 87
chr7	86514362	86515103	+	86514362	86515085	A3SS	0.5	50	50	ENSMUST00000236022.2	ENSMUSG00000092195.3	Vmn2r-ps87	chr7	transcribed_unprocessed_pseudogene	vomeronasal 2, receptor, pseudogene 87
chr7	86572276	86603460	+	86572276	86573260	3pMXE	0.5	50	50	ENSMUST00000233033.2	ENSMUSG00000091962.4	Vmn2r78	chr7	protein_coding	vomeronasal 2, receptor 78
chr7	86653372	86686257	+	86653372	86654378	3pMXE	0.5	50	50	ENSMUST00000233714.2	ENSMUSG00000090362.3	Vmn2r79	chr7	protein_coding	vomeronasal 2, receptor 79
chr7	86650692	86650818	+	86650692	86651080	A3SS	0.5	50	50	ENSMUST00000233714.2	ENSMUSG00000090362.3	Vmn2r79	chr7	protein_coding	vomeronasal 2, receptor 79
chr7	86651886	86652612	+	86651886	86652594	A3SS	0.5	50	50	ENSMUST00000233714.2	ENSMUSG00000090362.3	Vmn2r79	chr7	protein_coding	vomeronasal 2, receptor 79
chr7	86896791	86936381	+	86896791	86944992	A3SS	0.33	50	50	ENSMUST00000124057.8	ENSMUSG00000030562.18	Nox4	chr7	protein_coding	NADPH oxidase 4
chr7	86896791	86944996	+	86896791	86944992	A3SS	0.33	50	50	ENSMUST00000124057.8	ENSMUSG00000030562.18	Nox4	chr7	protein_coding	NADPH oxidase 4
chr7	86896791	86944996	+	86896791	86936381	3pMXE	0.33	50	50	ENSMUST00000124269.8	ENSMUSG00000030562.18	Nox4	chr7	protein_coding	NADPH oxidase 4
chr7	86973203	86976339	+	86973203	86988165	A3SS	0.5	50	50	ENSMUST00000032781.14	ENSMUSG00000030562.18	Nox4	chr7	protein_coding	NADPH oxidase 4
chr7	87025490	87041338	+	87025490	87045979	A3SS	0.33	50	50	ENSMUST00000032781.14	ENSMUSG00000030562.18	Nox4	chr7	protein_coding	NADPH oxidase 4
chr7	87025490	87044878	+	87025490	87045979	A3SS	0.33	50	50	ENSMUST00000032781.14	ENSMUSG00000030562.18	Nox4	chr7	protein_coding	NADPH oxidase 4
chr7	86980950	86988165	+	86973203	86988165	A5SS	0.5	50	50	ENSMUST00000032781.14	ENSMUSG00000030562.18	Nox4	chr7	protein_coding	NADPH oxidase 4
chr7	87025490	87044878	+	87025490	87041338	3pMXE	0.33	50	50	ENSMUST00000136577.9	ENSMUSG00000030562.18	Nox4	chr7	protein_coding	NADPH oxidase 4
chr7	87119393	87121607	-	87087326	87121607	A3SS	0.5	50	50	ENSMUST00000004770.7	ENSMUSG00000004651.7	Tyr	chr7	protein_coding	tyrosinase
chr7	87233748;87235926	87235723;87245324	+	87233748	87245324	cassetteExon	0.5	100	100	ENSMUST00000208791.2	ENSMUSG00000049583.16	Grm5	chr7	protein_coding	glutamate receptor, metabotropic 5
chr7	87233748	87245324	+	87233748	87235723	3pMXE	0.5	50	50	ENSMUST00000208878.2	ENSMUSG00000049583.16	Grm5	chr7	protein_coding	glutamate receptor, metabotropic 5
chr7	87724338;87765496	87765401;87779189	+	87724338	87779189	cassetteExon	0.5	100	100	ENSMUST00000125009.9	ENSMUSG00000049583.16	Grm5	chr7	protein_coding	glutamate receptor, metabotropic 5
chr7	87453272	87458509	+	87453272	87624343	A3SS	0.5	50	50	ENSMUST00000125009.9	ENSMUSG00000049583.16	Grm5	chr7	protein_coding	glutamate receptor, metabotropic 5
chr7	87927582	87930598	+	87927582	87930595	A3SS	0.5	50	50	ENSMUST00000032779.12	ENSMUSG00000030560.18	Ctsc	chr7	protein_coding	cathepsin C
chr7	87930740	87936102	+	87930740	87946291	A3SS	0.5	50	50	ENSMUST00000032779.12	ENSMUSG00000030560.18	Ctsc	chr7	protein_coding	cathepsin C
chr7	88099835	88139816	+	88099969	88139816	A5SS	0.5	50	50	ENSMUST00000107256.4	ENSMUSG00000030559.9	Rab38	chr7	protein_coding	RAB38, member RAS oncogene family
chr7	88956472	89053281	-	88956472	88987656	5pMXE	0.5	50	50	ENSMUST00000041968.11	ENSMUSG00000039428.12	Tmem135	chr7	protein_coding	transmembrane protein 135
chr7	88797017	88797178	-	88793963	88797178	A3SS	0.5	50	50	ENSMUST00000041968.11	ENSMUSG00000039428.12	Tmem135	chr7	protein_coding	transmembrane protein 135
chr7	88954746	88956345	-	88953981	88956345	A3SS	0.5	50	50	ENSMUST00000041968.11	ENSMUSG00000039428.12	Tmem135	chr7	protein_coding	transmembrane protein 135
chr7	88808223	88808724	-	88808223	88814333	A5SS	0.5	50	50	ENSMUST00000041968.11	ENSMUSG00000039428.12	Tmem135	chr7	protein_coding	transmembrane protein 135
chr7	88929208	88947446	-	88929208	88953889	A5SS	0.5	50	50	ENSMUST00000041968.11	ENSMUSG00000039428.12	Tmem135	chr7	protein_coding	transmembrane protein 135
chr7	89075656	89090715	+	89075656	89079056	3pMXE	0.5	50	50	ENSMUST00000209026.2	ENSMUSG00000109311.2	AI314278	chr7	lncRNA	expressed sequence AI314278
chr7	89160078	89167039	-	89160078	89166655	5pMXE	0.16	50	50	ENSMUST00000041761.7	ENSMUSG00000039405.8	Prss23	chr7	protein_coding	protease, serine 23
chr7	89160078	89167232	-	89160078	89166655	5pMXE	0.16	50	50	ENSMUST00000041761.7	ENSMUSG00000039405.8	Prss23	chr7	protein_coding	protease, serine 23
chr7	89160078	89167315	-	89160078	89166655	5pMXE	0.16	50	50	ENSMUST00000041761.7	ENSMUSG00000039405.8	Prss23	chr7	protein_coding	protease, serine 23
chr7	89160078	89167648	-	89160078	89166655	5pMXE	0.16	50	50	ENSMUST00000041761.7	ENSMUSG00000039405.8	Prss23	chr7	protein_coding	protease, serine 23
chr7	89160078	89176227	-	89160078	89166655	5pMXE	0.16	50	50	ENSMUST00000041761.7	ENSMUSG00000039405.8	Prss23	chr7	protein_coding	protease, serine 23
chr7	89160075	89166655	-	89160078	89166655	A3SS	0.5	50	50	ENSMUST00000041761.7	ENSMUSG00000039405.8	Prss23	chr7	protein_coding	protease, serine 23
chr7	89160078	89167039	-	89160078	89176227	A5SS	0.16	50	50	ENSMUST00000207932.2	ENSMUSG00000039405.8	Prss23	chr7	protein_coding	protease, serine 23
chr7	89160078	89167232	-	89160078	89176227	A5SS	0.16	50	50	ENSMUST00000207932.2	ENSMUSG00000039405.8	Prss23	chr7	protein_coding	protease, serine 23
chr7	89160078	89167315	-	89160078	89176227	A5SS	0.16	50	50	ENSMUST00000207932.2	ENSMUSG00000039405.8	Prss23	chr7	protein_coding	protease, serine 23
chr7	89160078	89167648	-	89160078	89176227	A5SS	0.16	50	50	ENSMUST00000207932.2	ENSMUSG00000039405.8	Prss23	chr7	protein_coding	protease, serine 23
chr7	89160078	89167039	-	89160010	89167039	A3SS	0.5	50	50	ENSMUST00000209118.2	ENSMUSG00000039405.8	Prss23	chr7	protein_coding	protease, serine 23
chr7	89160078	89167648	-	89160078	89167232	5pMXE	0.16	50	50	ENSMUST00000208402.2	ENSMUSG00000039405.8	Prss23	chr7	protein_coding	protease, serine 23
chr7	89160078	89167039	-	89160078	89167232	A5SS	0.16	50	50	ENSMUST00000208402.2	ENSMUSG00000039405.8	Prss23	chr7	protein_coding	protease, serine 23
chr7	89160078	89167315	-	89160078	89167232	A5SS	0.16	50	50	ENSMUST00000208402.2	ENSMUSG00000039405.8	Prss23	chr7	protein_coding	protease, serine 23
chr7	89160078	89167648	-	89160078	89167315	5pMXE	0.16	50	50	ENSMUST00000207636.2	ENSMUSG00000039405.8	Prss23	chr7	protein_coding	protease, serine 23
chr7	89160078	89167039	-	89160078	89167315	A5SS	0.16	50	50	ENSMUST00000207636.2	ENSMUSG00000039405.8	Prss23	chr7	protein_coding	protease, serine 23
chr7	89160078	89167648	-	89160078	89167039	5pMXE	0.16	50	50	ENSMUST00000207538.2	ENSMUSG00000039405.8	Prss23	chr7	protein_coding	protease, serine 23
chr7	89160218	89160787	+	89160218	89160979	A3SS	0.5	50	50	ENSMUST00000209064.2	ENSMUSG00000030623.5	Prss23os	chr7	lncRNA	protease, serine 23, opposite strand
chr7	89282301	89288399	+	89282301	89385836	A3SS	0.5	50	50	ENSMUST00000159504.8	ENSMUSG00000030621.18	Me3	chr7	protein_coding	malic enzyme 3, NADP(+)-dependent, mitochondrial
chr7	89389164	89412528	+	89389164	89435634	A3SS	0.5	50	50	ENSMUST00000159504.8	ENSMUSG00000030621.18	Me3	chr7	protein_coding	malic enzyme 3, NADP(+)-dependent, mitochondrial
chr7	89416938	89435634	+	89389164	89435634	A5SS	0.5	50	50	ENSMUST00000159504.8	ENSMUSG00000030621.18	Me3	chr7	protein_coding	malic enzyme 3, NADP(+)-dependent, mitochondrial
chr7	89455958	89467094	+	89455958	89482905	A3SS	0.33	50	50	ENSMUST00000032856.13	ENSMUSG00000030621.18	Me3	chr7	protein_coding	malic enzyme 3, NADP(+)-dependent, mitochondrial
chr7	89455958	89467829	+	89455958	89482905	A3SS	0.33	50	50	ENSMUST00000032856.13	ENSMUSG00000030621.18	Me3	chr7	protein_coding	malic enzyme 3, NADP(+)-dependent, mitochondrial
chr7	89478548	89482905	+	89455958	89482905	A5SS	0.5	50	50	ENSMUST00000032856.13	ENSMUSG00000030621.18	Me3	chr7	protein_coding	malic enzyme 3, NADP(+)-dependent, mitochondrial
chr7	89455958	89467829	+	89455958	89467094	3pMXE	0.33	50	50	ENSMUST00000159491.8	ENSMUSG00000030621.18	Me3	chr7	protein_coding	malic enzyme 3, NADP(+)-dependent, mitochondrial
chr7	89515854	89518829	-	89515854;89516030	89515932;89518829	ES	0.5	50	50	ENSMUST00000131966.8	ENSMUSG00000039391.12	Ccdc81	chr7	protein_coding	coiled-coil domain containing 81
chr7	89539679	89542320	-	89539677	89542320	A3SS	0.5	50	50	ENSMUST00000131966.8	ENSMUSG00000039391.12	Ccdc81	chr7	protein_coding	coiled-coil domain containing 81
chr7	89569399	89584935	-	89569399;89572923	89572772;89584935	ES	0.33	50	50	ENSMUST00000153470.9	ENSMUSG00000062797.15	Hikeshi	chr7	protein_coding	heat shock protein nuclear import factor
chr7	89572923	89590177	-	89572923;89585172	89584935;89590177	ES	0.25	50	50	ENSMUST00000153470.9	ENSMUSG00000062797.15	Hikeshi	chr7	protein_coding	heat shock protein nuclear import factor
chr7	89572923;89579668	89579528;89584935	-	89572923	89584935	cassetteExon	0.5	100	100	ENSMUST00000153470.9	ENSMUSG00000062797.15	Hikeshi	chr7	protein_coding	heat shock protein nuclear import factor
chr7	89572923;89579668	89579528;89590177	-	89572923;89585172	89584935;89590177	MXE	0.5	100	100	ENSMUST00000153470.9	ENSMUSG00000062797.15	Hikeshi	chr7	protein_coding	heat shock protein nuclear import factor
chr7	89585172;89589251	89589188;89590177	-	89585172	89590177	cassetteExon	0.5	100	100	ENSMUST00000153470.9	ENSMUSG00000062797.15	Hikeshi	chr7	protein_coding	heat shock protein nuclear import factor
chr7	89569399;89572923	89572772;89590177	-	89569399;89585172	89584935;89590177	MXE	0.5	100	100	ENSMUST00000207309.2	ENSMUSG00000062797.15	Hikeshi	chr7	protein_coding	heat shock protein nuclear import factor
chr7	89579668	89584935	-	89569399	89584935	A3SS	0.33	50	50	ENSMUST00000207309.2	ENSMUSG00000062797.15	Hikeshi	chr7	protein_coding	heat shock protein nuclear import factor
chr7	89579668	89590177	-	89585172	89590177	A3SS&ES	0.25	50	50	ENSMUST00000207309.2	ENSMUSG00000062797.15	Hikeshi	chr7	protein_coding	heat shock protein nuclear import factor
chr7	89579668	89590177	-	89579668;89585172	89584935;89590177	ES	0.25	50	50	ENSMUST00000078918.10	ENSMUSG00000062797.15	Hikeshi	chr7	protein_coding	heat shock protein nuclear import factor
chr7	89572923;89579668	89579528;89590177	-	89572923	89590177	cassetteExon	0.5	100	100	ENSMUST00000208357.2	ENSMUSG00000062797.15	Hikeshi	chr7	protein_coding	heat shock protein nuclear import factor
chr7	89589251	89590177	-	89572923	89590177	A3SS	0.25	50	50	ENSMUST00000208357.2	ENSMUSG00000062797.15	Hikeshi	chr7	protein_coding	heat shock protein nuclear import factor
chr7	89572923;89579668	89579528;89590177	-	89572923;89589251	89584935;89590177	MXE	0.5	100	100	ENSMUST00000075010.12	ENSMUSG00000062797.15	Hikeshi	chr7	protein_coding	heat shock protein nuclear import factor
chr7	89569399	89584935	-	89569399	89572772	5pMXE	0.5	50	50	ENSMUST00000150740.2	ENSMUSG00000062797.15	Hikeshi	chr7	protein_coding	heat shock protein nuclear import factor
chr7	89589251	89590177	-	89579668	89590177	A3SS	0.25	50	50	ENSMUST00000130609.3	ENSMUSG00000062797.15	Hikeshi	chr7	protein_coding	heat shock protein nuclear import factor
chr7	89621531	89629620	-	89621531;89626257	89626105;89629620	ES	0.5	50	50	ENSMUST00000238981.2	ENSMUSG00000030619.11	Eed	chr7	protein_coding	embryonic ectoderm development
chr7	89620813;89621003	89620904;89621439	-	89620813	89621439	cassetteExon	0.5	100	100	ENSMUST00000238981.2	ENSMUSG00000030619.11	Eed	chr7	protein_coding	embryonic ectoderm development
chr7	89604812	89605552	-	89604812	89605463	A5SS	0.5	50	50	ENSMUST00000238981.2	ENSMUSG00000030619.11	Eed	chr7	protein_coding	embryonic ectoderm development
chr7	89621531	89629620	-	89626257	89629620	3pMXE	0.5	50	50	ENSMUST00000157001.2	ENSMUSG00000030619.11	Eed	chr7	protein_coding	embryonic ectoderm development
chr7	89678435	89686087	+	89660484	89686087	A5SS	0.5	50	50	ENSMUST00000207458.2	ENSMUSG00000097585.3	E230029C05Rik	chr7	lncRNA	RIKEN cDNA E230029C05 gene
chr7	89678435	89686087	+	89678435	89686186	A3SS	0.5	50	50	ENSMUST00000208362.2	ENSMUSG00000097585.3	E230029C05Rik	chr7	lncRNA	RIKEN cDNA E230029C05 gene
chr7	89690339	89697903	+	89690339	89697871	A3SS	0.5	50	50	ENSMUST00000208547.2	ENSMUSG00000097585.3	E230029C05Rik	chr7	lncRNA	RIKEN cDNA E230029C05 gene
chr7	89687278	89689938	+	89687282	89689938	A5SS	0.5	50	50	ENSMUST00000208547.2	ENSMUSG00000097585.3	E230029C05Rik	chr7	lncRNA	RIKEN cDNA E230029C05 gene
chr7	89774240;89776252	89776136;89779080	-	89774240	89779080	cassetteExon	0.5	100	100	ENSMUST00000209166.2	ENSMUSG00000097162.3	2310010J17Rik	chr7	lncRNA	RIKEN cDNA 2310010J17 gene
chr7	89776252	89776805	-	89776252	89779080	A5SS	0.5	50	50	ENSMUST00000209164.2	ENSMUSG00000097162.3	2310010J17Rik	chr7	lncRNA	RIKEN cDNA 2310010J17 gene
chr7	89810543	89818390	+	89810543;89814824	89814722;89818390	ES	0.5	50	50	ENSMUST00000207225.2	ENSMUSG00000039361.12	Picalm	chr7	protein_coding	phosphatidylinositol binding clathrin assembly protein
chr7	89826811;89831576	89831427;89838358	+	89826811	89838358	cassetteExon	0.5	100	100	ENSMUST00000207225.2	ENSMUSG00000039361.12	Picalm	chr7	protein_coding	phosphatidylinositol binding clathrin assembly protein
chr7	89840961;89843504	89843481;89844863	+	89840961	89844863	cassetteExon	0.5	100	100	ENSMUST00000207225.2	ENSMUSG00000039361.12	Picalm	chr7	protein_coding	phosphatidylinositol binding clathrin assembly protein
chr7	89846228;89855469	89855368;89856791	+	89846228	89856791	cassetteExon	0.5	100	100	ENSMUST00000207225.2	ENSMUSG00000039361.12	Picalm	chr7	protein_coding	phosphatidylinositol binding clathrin assembly protein
chr7	89838465	89840349	+	89838465	89840364	A3SS	0.5	50	50	ENSMUST00000207225.2	ENSMUSG00000039361.12	Picalm	chr7	protein_coding	phosphatidylinositol binding clathrin assembly protein
chr7	89780908	89809656	+	89779910	89809656	A5SS	0.5	50	50	ENSMUST00000207225.2	ENSMUSG00000039361.12	Picalm	chr7	protein_coding	phosphatidylinositol binding clathrin assembly protein
chr7	89810543	89818390	+	89810543	89814722	3pMXE	0.5	50	50	ENSMUST00000208684.2	ENSMUSG00000039361.12	Picalm	chr7	protein_coding	phosphatidylinositol binding clathrin assembly protein
chr7	89810543	89818390	+	89814824	89818390	5pMXE	0.5	50	50	ENSMUST00000207084.2	ENSMUSG00000039361.12	Picalm	chr7	protein_coding	phosphatidylinositol binding clathrin assembly protein
chr7	89884216	89886086	-	89879120	89886086	A3SS	0.33	50	50	ENSMUST00000107221.9	ENSMUSG00000030617.14	Ccdc83	chr7	protein_coding	coiled-coil domain containing 83
chr7	89885711	89886086	-	89879120	89886086	A3SS	0.33	50	50	ENSMUST00000107221.9	ENSMUSG00000030617.14	Ccdc83	chr7	protein_coding	coiled-coil domain containing 83
chr7	89885711	89886086	-	89884216	89886086	A3SS	0.33	50	50	ENSMUST00000107220.8	ENSMUSG00000030617.14	Ccdc83	chr7	protein_coding	coiled-coil domain containing 83
chr7	90007492	90009334	+	90007492	90009253	A3SS	0.5	50	50	ENSMUST00000207578.2	ENSMUSG00000030616.17	Sytl2	chr7	protein_coding	synaptotagmin-like 2
chr7	90032390	90034251	+	90028781	90034251	A5SS	0.33	50	50	ENSMUST00000208720.2	ENSMUSG00000030616.17	Sytl2	chr7	protein_coding	synaptotagmin-like 2
chr7	90033328	90034251	+	90028781	90034251	A5SS	0.33	50	50	ENSMUST00000208720.2	ENSMUSG00000030616.17	Sytl2	chr7	protein_coding	synaptotagmin-like 2
chr7	90036764	90041567	+	90036764;90038123	90038076;90041567	ES	0.5	50	50	ENSMUST00000190837.7	ENSMUSG00000030616.17	Sytl2	chr7	protein_coding	synaptotagmin-like 2
chr7	90041661	90045682	+	90041661;90044490	90044371;90045682	ES	0.5	50	50	ENSMUST00000190837.7	ENSMUSG00000030616.17	Sytl2	chr7	protein_coding	synaptotagmin-like 2
chr7	90041661;90042823	90042731;90044371	+	90041661	90044371	cassetteExon	0.5	100	100	ENSMUST00000190837.7	ENSMUSG00000030616.17	Sytl2	chr7	protein_coding	synaptotagmin-like 2
chr7	90041661	90042731	+	90041661	90045682	A3SS	0.33	50	50	ENSMUST00000107210.3	ENSMUSG00000030616.17	Sytl2	chr7	protein_coding	synaptotagmin-like 2
chr7	90033328	90034251	+	90032390	90034251	A5SS	0.33	50	50	ENSMUST00000190365.8	ENSMUSG00000030616.17	Sytl2	chr7	protein_coding	synaptotagmin-like 2
chr7	90093585;90093940	90093826;90094633	+	90093585	90094633	cassetteExon	0.5	100	100	ENSMUST00000107206.3	ENSMUSG00000051451.7	Crebzf	chr7	protein_coding	CREB/ATF bZIP transcription factor
chr7	90093410	90093508	+	90093295	90093508	A5SS	0.5	50	50	ENSMUST00000107206.3	ENSMUSG00000051451.7	Crebzf	chr7	protein_coding	CREB/ATF bZIP transcription factor
chr7	90093585	90094633	+	90093585	90093826	3pMXE	0.5	50	50	ENSMUST00000126041.2	ENSMUSG00000051451.7	Crebzf	chr7	protein_coding	CREB/ATF bZIP transcription factor
chr7	90093585	90094633	+	90093940	90094633	5pMXE	0.5	50	50	ENSMUST00000146291.2	ENSMUSG00000051451.7	Crebzf	chr7	protein_coding	CREB/ATF bZIP transcription factor
chr7	90100865	90104632	-	90100865;90102108	90101937;90104632	ES	0.5	50	50	ENSMUST00000136652.8	ENSMUSG00000030615.13	Tmem126a	chr7	protein_coding	transmembrane protein 126A
chr7	90100865	90101915	-	90100865	90101937	A5SS	0.33	50	50	ENSMUST00000136652.8	ENSMUSG00000030615.13	Tmem126a	chr7	protein_coding	transmembrane protein 126A
chr7	90100865	90104632	-	90100865;90102108	90101915;90104632	ES	0.5	50	50	ENSMUST00000032844.7	ENSMUSG00000030615.13	Tmem126a	chr7	protein_coding	transmembrane protein 126A
chr7	90126487	90126928	+	90126019	90126928	A5SS	0.5	50	50	ENSMUST00000208919.2	ENSMUSG00000052572.20	Dlg2	chr7	protein_coding	discs large MAGUK scaffold protein 2
chr7	90154145	90381103	+	90154145	90171779	3pMXE	0.5	50	50	ENSMUST00000209170.2	ENSMUSG00000052572.20	Dlg2	chr7	protein_coding	discs large MAGUK scaffold protein 2
chr7	91617464	91690006	+	91617464;91646529	91646374;91690006	ES	0.5	50	50	ENSMUST00000231777.3	ENSMUSG00000052572.20	Dlg2	chr7	protein_coding	discs large MAGUK scaffold protein 2
chr7	92036198;92066531	92066432;92076899	+	92036198;92067341	92067296;92076899	MXE	0.5	100	100	ENSMUST00000231777.3	ENSMUSG00000052572.20	Dlg2	chr7	protein_coding	discs large MAGUK scaffold protein 2
chr7	92067341;92069881	92069840;92076899	+	92067341	92076899	cassetteExon	0.5	100	100	ENSMUST00000231777.3	ENSMUSG00000052572.20	Dlg2	chr7	protein_coding	discs large MAGUK scaffold protein 2
chr7	90536927	90564668	+	90501971	90564668	A5SS	0.5	50	50	ENSMUST00000231777.3	ENSMUSG00000052572.20	Dlg2	chr7	protein_coding	discs large MAGUK scaffold protein 2
chr7	90740256	91098962	+	90564742	91098962	A5SS	0.5	50	50	ENSMUST00000231777.3	ENSMUSG00000052572.20	Dlg2	chr7	protein_coding	discs large MAGUK scaffold protein 2
chr7	91192399	91382299	+	91099123	91382299	A5SS	0.25	50	50	ENSMUST00000231777.3	ENSMUSG00000052572.20	Dlg2	chr7	protein_coding	discs large MAGUK scaffold protein 2
chr7	91322162	91382299	+	91099123	91382299	A5SS	0.25	50	50	ENSMUST00000231777.3	ENSMUSG00000052572.20	Dlg2	chr7	protein_coding	discs large MAGUK scaffold protein 2
chr7	91361006	91382299	+	91099123	91382299	A5SS	0.25	50	50	ENSMUST00000231777.3	ENSMUSG00000052572.20	Dlg2	chr7	protein_coding	discs large MAGUK scaffold protein 2
chr7	91361006	91459687	+	91382352	91459687	A5SS&ES	0.5	50	50	ENSMUST00000231777.3	ENSMUSG00000052572.20	Dlg2	chr7	protein_coding	discs large MAGUK scaffold protein 2
chr7	91715614	91737770	+	91690074	91737770	A5SS	0.5	50	50	ENSMUST00000231777.3	ENSMUSG00000052572.20	Dlg2	chr7	protein_coding	discs large MAGUK scaffold protein 2
chr7	91830229	91935699	+	91775850	91935699	A5SS	0.25	50	50	ENSMUST00000231777.3	ENSMUSG00000052572.20	Dlg2	chr7	protein_coding	discs large MAGUK scaffold protein 2
chr7	91830260	91935699	+	91775850	91935699	A5SS	0.25	50	50	ENSMUST00000231777.3	ENSMUSG00000052572.20	Dlg2	chr7	protein_coding	discs large MAGUK scaffold protein 2
chr7	91884432	91935699	+	91775850	91935699	A5SS	0.25	50	50	ENSMUST00000231777.3	ENSMUSG00000052572.20	Dlg2	chr7	protein_coding	discs large MAGUK scaffold protein 2
chr7	92066531;92069881	92069840;92076899	+	92066531	92076899	cassetteExon	0.5	100	100	ENSMUST00000074273.10	ENSMUSG00000052572.20	Dlg2	chr7	protein_coding	discs large MAGUK scaffold protein 2
chr7	91322162	91382299	+	91192399	91382299	A5SS	0.25	50	50	ENSMUST00000239136.2	ENSMUSG00000052572.20	Dlg2	chr7	protein_coding	discs large MAGUK scaffold protein 2
chr7	91361006	91382299	+	91192399	91382299	A5SS	0.25	50	50	ENSMUST00000239136.2	ENSMUSG00000052572.20	Dlg2	chr7	protein_coding	discs large MAGUK scaffold protein 2
chr7	91361006	91382299	+	91322162	91382299	A5SS	0.25	50	50	ENSMUST00000238619.2	ENSMUSG00000052572.20	Dlg2	chr7	protein_coding	discs large MAGUK scaffold protein 2
chr7	92036198;92067341	92067296;92069840	+	92036198;92066531	92066432;92069840	MXE	0.5	100	100	ENSMUST00000238467.2	ENSMUSG00000052572.20	Dlg2	chr7	protein_coding	discs large MAGUK scaffold protein 2
chr7	92036198;92067341	92067296;92076899	+	92036198;92069881	92066432;92076899	MXE	0.5	100	100	ENSMUST00000238467.2	ENSMUSG00000052572.20	Dlg2	chr7	protein_coding	discs large MAGUK scaffold protein 2
chr7	91617464	91690006	+	91617464	91646374	3pMXE	0.5	50	50	ENSMUST00000152139.8	ENSMUSG00000052572.20	Dlg2	chr7	protein_coding	discs large MAGUK scaffold protein 2
chr7	92036198;92066531	92066432;92076899	+	92036198;92069881	92067296;92076899	MXE	0.5	100	100	ENSMUST00000238608.2	ENSMUSG00000052572.20	Dlg2	chr7	protein_coding	discs large MAGUK scaffold protein 2
chr7	91361006	91459687	+	91361006;91382352	91382299;91459687	ES	0.5	50	50	ENSMUST00000128592.3	ENSMUSG00000052572.20	Dlg2	chr7	protein_coding	discs large MAGUK scaffold protein 2
chr7	91830229	91935699	+	91830260	91935699	A5SS	0.25	50	50	ENSMUST00000129818.2	ENSMUSG00000052572.20	Dlg2	chr7	protein_coding	discs large MAGUK scaffold protein 2
chr7	91884432	91935699	+	91830260	91935699	A5SS	0.25	50	50	ENSMUST00000129818.2	ENSMUSG00000052572.20	Dlg2	chr7	protein_coding	discs large MAGUK scaffold protein 2
chr7	91884432	91935699	+	91830229	91935699	A5SS	0.25	50	50	ENSMUST00000207798.2	ENSMUSG00000052572.20	Dlg2	chr7	protein_coding	discs large MAGUK scaffold protein 2
chr7	92210843	92216830	+	92210843	92213724	3pMXE	0.5	50	50	ENSMUST00000153776.2	ENSMUSG00000030613.14	Ccdc90b	chr7	protein_coding	coiled-coil domain containing 90B
chr7	92217783	92223830	+	92217783;92221848	92221747;92223830	ES	0.5	50	50	ENSMUST00000032842.13	ENSMUSG00000030613.14	Ccdc90b	chr7	protein_coding	coiled-coil domain containing 90B
chr7	92263760	92273176	-	92263760;92268891	92268756;92273176	ES	0.33	50	50	ENSMUST00000056106.14	ENSMUSG00000041343.20	Ankrd42	chr7	protein_coding	ankyrin repeat domain 42
chr7	92254588;92259194	92258982;92259753	-	92254588	92259753	cassetteExon	0.5	100	100	ENSMUST00000056106.14	ENSMUSG00000041343.20	Ankrd42	chr7	protein_coding	ankyrin repeat domain 42
chr7	92259579	92259753	-	92254588	92259753	A3SS	0.33	50	50	ENSMUST00000056106.14	ENSMUSG00000041343.20	Ankrd42	chr7	protein_coding	ankyrin repeat domain 42
chr7	92268933	92273176	-	92268891	92273176	A3SS	0.33	50	50	ENSMUST00000056106.14	ENSMUSG00000041343.20	Ankrd42	chr7	protein_coding	ankyrin repeat domain 42
chr7	92263760	92273176	-	92263760;92268933	92268756;92273176	ES	0.33	50	50	ENSMUST00000126305.8	ENSMUSG00000041343.20	Ankrd42	chr7	protein_coding	ankyrin repeat domain 42
chr7	92254588	92259753	-	92254588	92258982	5pMXE	0.5	50	50	ENSMUST00000138215.2	ENSMUSG00000041343.20	Ankrd42	chr7	protein_coding	ankyrin repeat domain 42
chr7	92254588	92259753	-	92259194	92259753	3pMXE	0.33	50	50	ENSMUST00000138267.2	ENSMUSG00000041343.20	Ankrd42	chr7	protein_coding	ankyrin repeat domain 42
chr7	92259579	92259753	-	92259194	92259753	A3SS	0.33	50	50	ENSMUST00000138267.2	ENSMUSG00000041343.20	Ankrd42	chr7	protein_coding	ankyrin repeat domain 42
chr7	92308074	92308613	-	92308074	92309006	A5SS	0.5	50	50	ENSMUST00000119954.9	ENSMUSG00000041328.17	Pcf11	chr7	protein_coding	PCF11 cleavage and polyadenylation factor subunit
chr7	92469291	92478734	+	92469291;92473089	92473006;92478734	ES	0.5	50	50	ENSMUST00000032879.15	ENSMUSG00000030643.15	Rab30	chr7	protein_coding	RAB30, member RAS oncogene family
chr7	92469291	92473022	+	92469291	92473006	A3SS	0.33	50	50	ENSMUST00000032879.15	ENSMUSG00000030643.15	Rab30	chr7	protein_coding	RAB30, member RAS oncogene family
chr7	92426898	92469191	+	92391050	92469191	A5SS	0.5	50	50	ENSMUST00000032879.15	ENSMUSG00000030643.15	Rab30	chr7	protein_coding	RAB30, member RAS oncogene family
chr7	92469291	92478734	+	92469291;92473089	92473022;92478734	ES	0.5	50	50	ENSMUST00000208470.2	ENSMUSG00000030643.15	Rab30	chr7	protein_coding	RAB30, member RAS oncogene family
chr7	92515907;92517398	92517320;92521970	-	92515907	92521970	cassetteExon	0.5	100	100	ENSMUST00000032877.11	ENSMUSG00000030641.11	Ddias	chr7	protein_coding	DNA damage-induced apoptosis suppressor
chr7	92515907;92517406	92517320;92521970	-	92515907	92521970	cassetteExon	0.5	100	100	ENSMUST00000032877.11	ENSMUSG00000030641.11	Ddias	chr7	protein_coding	DNA damage-induced apoptosis suppressor
chr7	92516410	92517320	-	92515907	92517320	A3SS	0.5	50	50	ENSMUST00000208356.2	ENSMUSG00000030641.11	Ddias	chr7	protein_coding	DNA damage-induced apoptosis suppressor
chr7	92517398	92521970	-	92517406	92521970	A3SS	0.33	50	50	ENSMUST00000208356.2	ENSMUSG00000030641.11	Ddias	chr7	protein_coding	DNA damage-induced apoptosis suppressor
chr7	92554420	92555557	+	92554420	92559343	A3SS	0.5	50	50	ENSMUST00000076052.8	ENSMUSG00000061119.8	Prcp	chr7	protein_coding	prolylcarboxypeptidase (angiotensinase C)
chr7	92566929	92568210	+	92567034	92568210	A5SS	0.5	50	50	ENSMUST00000076052.8	ENSMUSG00000061119.8	Prcp	chr7	protein_coding	prolylcarboxypeptidase (angiotensinase C)
chr7	92717347	92729099	-	92702228	92729099	A3SS	0.5	50	50	ENSMUST00000098303.3	ENSMUSG00000054061.10	Gm9934	chr7	lncRNA	predicted gene 9934
chr7	96086065	96199219	+	96086065;96145547	96145451;96199219	ES	0.33	50	50	ENSMUST00000107162.8	ENSMUSG00000048078.17	Tenm4	chr7	protein_coding	teneurin transmembrane protein 4
chr7	96202954	96343977	+	96202954;96293415	96293206;96343977	ES	0.5	50	50	ENSMUST00000107162.8	ENSMUSG00000048078.17	Tenm4	chr7	protein_coding	teneurin transmembrane protein 4
chr7	96344232	96353133	+	96344232;96351947	96351849;96353133	ES	0.5	50	50	ENSMUST00000107162.8	ENSMUSG00000048078.17	Tenm4	chr7	protein_coding	teneurin transmembrane protein 4
chr7	96446712;96454338	96454312;96461040	+	96446712	96461040	cassetteExon	0.5	100	100	ENSMUST00000107162.8	ENSMUSG00000048078.17	Tenm4	chr7	protein_coding	teneurin transmembrane protein 4
chr7	96501789;96503944	96503924;96512657	+	96501789	96512657	cassetteExon	0.5	100	100	ENSMUST00000107162.8	ENSMUSG00000048078.17	Tenm4	chr7	protein_coding	teneurin transmembrane protein 4
chr7	96086065	96145455	+	96086065	96145451	A3SS	0.33	50	50	ENSMUST00000107162.8	ENSMUSG00000048078.17	Tenm4	chr7	protein_coding	teneurin transmembrane protein 4
chr7	96145547	96147938	+	96145547	96199219	A3SS	0.5	50	50	ENSMUST00000107162.8	ENSMUSG00000048078.17	Tenm4	chr7	protein_coding	teneurin transmembrane protein 4
chr7	95858991	96004563	+	95820700	96004563	A5SS	0.2	50	50	ENSMUST00000107162.8	ENSMUSG00000048078.17	Tenm4	chr7	protein_coding	teneurin transmembrane protein 4
chr7	95859616	96004563	+	95820700	96004563	A5SS	0.2	50	50	ENSMUST00000107162.8	ENSMUSG00000048078.17	Tenm4	chr7	protein_coding	teneurin transmembrane protein 4
chr7	95859977	96004563	+	95820700	96004563	A5SS	0.2	50	50	ENSMUST00000107162.8	ENSMUSG00000048078.17	Tenm4	chr7	protein_coding	teneurin transmembrane protein 4
chr7	95861197	96004563	+	95820700	96004563	A5SS	0.2	50	50	ENSMUST00000107162.8	ENSMUSG00000048078.17	Tenm4	chr7	protein_coding	teneurin transmembrane protein 4
chr7	96171708	96199219	+	96145547	96199219	A5SS	0.33	50	50	ENSMUST00000107162.8	ENSMUSG00000048078.17	Tenm4	chr7	protein_coding	teneurin transmembrane protein 4
chr7	96445963	96446527	+	96427226	96446527	A5SS	0.5	50	50	ENSMUST00000107162.8	ENSMUSG00000048078.17	Tenm4	chr7	protein_coding	teneurin transmembrane protein 4
chr7	95859616	96004563	+	95858991	96004563	A5SS	0.2	50	50	ENSMUST00000144263.8	ENSMUSG00000048078.17	Tenm4	chr7	protein_coding	teneurin transmembrane protein 4
chr7	95859977	96004563	+	95858991	96004563	A5SS	0.2	50	50	ENSMUST00000144263.8	ENSMUSG00000048078.17	Tenm4	chr7	protein_coding	teneurin transmembrane protein 4
chr7	95861197	96004563	+	95858991	96004563	A5SS	0.2	50	50	ENSMUST00000144263.8	ENSMUSG00000048078.17	Tenm4	chr7	protein_coding	teneurin transmembrane protein 4
chr7	95859977	96004563	+	95859616	96004563	A5SS	0.2	50	50	ENSMUST00000129445.8	ENSMUSG00000048078.17	Tenm4	chr7	protein_coding	teneurin transmembrane protein 4
chr7	95861197	96004563	+	95859616	96004563	A5SS	0.2	50	50	ENSMUST00000129445.8	ENSMUSG00000048078.17	Tenm4	chr7	protein_coding	teneurin transmembrane protein 4
chr7	96086065;96145547	96145455;96199219	+	96086065	96199219	cassetteExon	0.5	100	100	ENSMUST00000138760.8	ENSMUSG00000048078.17	Tenm4	chr7	protein_coding	teneurin transmembrane protein 4
chr7	96171708	96199219	+	96086065	96199219	A5SS	0.33	50	50	ENSMUST00000138760.8	ENSMUSG00000048078.17	Tenm4	chr7	protein_coding	teneurin transmembrane protein 4
chr7	95861197	96004563	+	95859977	96004563	A5SS	0.2	50	50	ENSMUST00000107166.8	ENSMUSG00000048078.17	Tenm4	chr7	protein_coding	teneurin transmembrane protein 4
chr7	96202954	96343977	+	96293415	96343977	5pMXE	0.5	50	50	ENSMUST00000131541.2	ENSMUSG00000048078.17	Tenm4	chr7	protein_coding	teneurin transmembrane protein 4
chr7	96594888	96598060	-	96594888	96596120	5pMXE	0.5	50	50	ENSMUST00000136294.3	ENSMUSG00000085560.3	C230038L03Rik	chr7	lncRNA	RIKEN cDNA C230038L03 gene
chr7	96568046	96594802	-	96557753	96594802	A3SS	0.5	50	50	ENSMUST00000136294.3	ENSMUSG00000085560.3	C230038L03Rik	chr7	lncRNA	RIKEN cDNA C230038L03 gene
chr7	96599382	96600810	-	96599382	96600654	5pMXE	0.5	50	50	ENSMUST00000129409.2	ENSMUSG00000085560.3	C230038L03Rik	chr7	lncRNA	RIKEN cDNA C230038L03 gene
chr7	96684504	96706655	+	96684504;96689243	96689106;96706655	ES	0.5	50	50	ENSMUST00000044466.12	ENSMUSG00000018995.13	Nars2	chr7	protein_coding	asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)
chr7	96680643	96680758	+	96680643	96680753	A3SS	0.5	50	50	ENSMUST00000044466.12	ENSMUSG00000018995.13	Nars2	chr7	protein_coding	asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)
chr7	96689243	96689478	+	96689243	96706655	A3SS	0.5	50	50	ENSMUST00000044466.12	ENSMUSG00000018995.13	Nars2	chr7	protein_coding	asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)
chr7	96600862	96605151	+	96601151	96605151	A5SS	0.5	50	50	ENSMUST00000044466.12	ENSMUSG00000018995.13	Nars2	chr7	protein_coding	asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)
chr7	96709080	96711776	+	96709019	96711776	A5SS	0.5	50	50	ENSMUST00000044466.12	ENSMUSG00000018995.13	Nars2	chr7	protein_coding	asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)
chr7	96684504	96706655	+	96689243	96706655	5pMXE	0.5	50	50	ENSMUST00000150681.3	ENSMUSG00000018995.13	Nars2	chr7	protein_coding	asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)
chr7	96951666	96952234	+	96951666	96952231	A3SS	0.5	50	50	ENSMUST00000004622.7	ENSMUSG00000004508.7	Gab2	chr7	protein_coding	growth factor receptor bound protein 2-associated protein 2
chr7	96971385;96971678	96971481;96973415	-	96971385	96973415	cassetteExon	0.5	100	100	ENSMUST00000168435.7	ENSMUSG00000035713.16	Usp35	chr7	protein_coding	ubiquitin specific peptidase 35
chr7	96968789	96969174	-	96964134	96969174	A3SS	0.5	50	50	ENSMUST00000168435.7	ENSMUSG00000035713.16	Usp35	chr7	protein_coding	ubiquitin specific peptidase 35
chr7	96964134	96964287	-	96964134	96969174	A5SS	0.33	50	50	ENSMUST00000168435.7	ENSMUSG00000035713.16	Usp35	chr7	protein_coding	ubiquitin specific peptidase 35
chr7	96964134	96964294	-	96964134	96969174	A5SS	0.33	50	50	ENSMUST00000168435.7	ENSMUSG00000035713.16	Usp35	chr7	protein_coding	ubiquitin specific peptidase 35
chr7	96964134	96964287	-	96964134	96964294	A5SS	0.5	50	50	ENSMUST00000181651.3	ENSMUSG00000035713.16	Usp35	chr7	protein_coding	ubiquitin specific peptidase 35
chr7	97036148	97037690	+	97036148	97037656	A3SS	0.5	50	50	ENSMUST00000098300.6	ENSMUSG00000035704.18	Alg8	chr7	protein_coding	asparagine-linked glycosylation 8 (alpha-1,3-glucosyltransferase)
chr7	97037795	97039434	+	97037795	97039449	A3SS	0.5	50	50	ENSMUST00000098300.6	ENSMUSG00000035704.18	Alg8	chr7	protein_coding	asparagine-linked glycosylation 8 (alpha-1,3-glucosyltransferase)
chr7	97036475	97037656	+	97036148	97037656	A5SS	0.5	50	50	ENSMUST00000098300.6	ENSMUSG00000035704.18	Alg8	chr7	protein_coding	asparagine-linked glycosylation 8 (alpha-1,3-glucosyltransferase)
chr7	97102669;97104184	97104064;97106801	+	97102669	97106801	cassetteExon	0.5	100	100	ENSMUST00000206658.2	ENSMUSG00000051727.15	Kctd14	chr7	protein_coding	potassium channel tetramerisation domain containing 14
chr7	97102669;97104184	97104097;97106801	+	97102669	97106801	cassetteExon	0.5	100	100	ENSMUST00000206658.2	ENSMUSG00000051727.15	Kctd14	chr7	protein_coding	potassium channel tetramerisation domain containing 14
chr7	97102669	97104064	+	97102669	97104097	A3SS	0.33	50	50	ENSMUST00000121987.3	ENSMUSG00000051727.15	Kctd14	chr7	protein_coding	potassium channel tetramerisation domain containing 14
chr7	97155342;97156507	97156219;97156923	+	97155342	97156923	cassetteExon	0.5	100	100	ENSMUST00000026126.10	ENSMUSG00000025133.10	Ints4	chr7	protein_coding	integrator complex subunit 4
chr7	97199948	97214358	-	97199948;97207433	97207338;97214358	ES	0.5	50	50	ENSMUST00000178078.8	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97214507	97228463	-	97214507	97224795	5pMXE	0.2	50	50	ENSMUST00000178078.8	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97214507	97228573	-	97214507	97224795	5pMXE	0.2	50	50	ENSMUST00000178078.8	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97214507;97217822	97217659;97224795	-	97214507	97224795	cassetteExon	0.5	100	100	ENSMUST00000178078.8	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97214507;97218981	97218894;97224795	-	97214507	97224795	cassetteExon	0.5	100	100	ENSMUST00000178078.8	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97199948	97224795	-	97199948;97214507	97214358;97224795	ES	0.25	50	50	ENSMUST00000042627.16	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97207433	97228573	-	97207433;97214507	97214358;97228573	ES	0.16	50	50	ENSMUST00000136757.8	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97199948;97224898	97224795;97228573	-	97199948;97214507	97207338;97228573	MXE	0.5	100	100	ENSMUST00000136757.8	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97214507;97224898	97224795;97228573	-	97214507	97228573	cassetteExon	0.5	100	100	ENSMUST00000136757.8	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97227839	97228573	-	97214507	97228573	A3SS	0.16	50	50	ENSMUST00000136757.8	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97227971	97228573	-	97214507	97228573	A3SS	0.16	50	50	ENSMUST00000136757.8	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97214507	97217659	-	97214507	97228573	A5SS	0.2	50	50	ENSMUST00000136757.8	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97214507	97218894	-	97214507	97228573	A5SS	0.2	50	50	ENSMUST00000136757.8	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97214507	97228463	-	97214507	97228573	A5SS	0.2	50	50	ENSMUST00000136757.8	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97199948;97207433	97207338;97228573	-	97199948;97224898	97214358;97228573	MXE	0.5	100	100	ENSMUST00000072725.12	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97224898;97227839	97227665;97228573	-	97224898	97228573	cassetteExon	0.5	100	100	ENSMUST00000072725.12	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97224898;97227971	97227665;97228573	-	97224898	97228573	cassetteExon	0.5	100	100	ENSMUST00000072725.12	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97224898	97226948	-	97224898	97228573	A5SS	0.33	50	50	ENSMUST00000072725.12	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97214507;97218981	97218894;97224795	-	97214507;97217822	97217659;97224795	MXE	0.5	100	100	ENSMUST00000126085.8	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97214507	97228463	-	97214507	97217659	A5SS&ES	0.2	50	50	ENSMUST00000126085.8	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97199948;97207433	97207338;97228573	-	97199948	97228573	cassetteExon	0.5	100	100	ENSMUST00000140805.2	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97199948;97214507	97214358;97228573	-	97199948	97228573	cassetteExon	0.5	100	100	ENSMUST00000140805.2	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97199948;97224898	97224795;97228573	-	97199948	97228573	cassetteExon	0.5	100	100	ENSMUST00000140805.2	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97227839	97228573	-	97199948	97228573	A3SS	0.16	50	50	ENSMUST00000140805.2	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97227971	97228573	-	97199948	97228573	A3SS	0.16	50	50	ENSMUST00000140805.2	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97199948;97214507	97214358;97228573	-	97199948;97207433	97207338;97228573	MXE	0.5	100	100	ENSMUST00000124552.3	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97199948;97224898	97224795;97228573	-	97199948;97207433	97207338;97228573	MXE	0.5	100	100	ENSMUST00000124552.3	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97227839	97228573	-	97207433	97228573	A3SS	0.16	50	50	ENSMUST00000124552.3	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97227971	97228573	-	97207433	97228573	A3SS	0.16	50	50	ENSMUST00000124552.3	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97199948;97214507	97214358;97228573	-	97199948;97224898	97224795;97228573	MXE	0.5	100	100	ENSMUST00000144858.8	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97217822	97224795	-	97199948	97224795	A3SS	0.25	50	50	ENSMUST00000144858.8	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97218981	97224795	-	97199948	97224795	A3SS	0.25	50	50	ENSMUST00000144858.8	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97214507	97228463	-	97214507	97218894	A5SS&ES	0.2	50	50	ENSMUST00000154779.8	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97199948	97224795	-	97199948	97207338	A5SS&ES	0.25	50	50	ENSMUST00000146605.8	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97199948	97228573	-	97199948	97207338	A5SS&ES	0.25	50	50	ENSMUST00000146605.8	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97207433	97228573	-	97207433	97214358	A5SS&ES	0.5	50	50	ENSMUST00000146605.8	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97227971	97228573	-	97227839	97228573	A3SS	0.16	50	50	ENSMUST00000135998.8	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97224898	97226948	-	97224898	97227665	A5SS	0.33	50	50	ENSMUST00000135998.8	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97199948;97207433	97207338;97228573	-	97199948;97227971	97214358;97228573	MXE	0.5	100	100	ENSMUST00000151840.2	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97224898;97227839	97227665;97228573	-	97224898;97227971	97226948;97228573	MXE	0.5	100	100	ENSMUST00000151840.2	ENSMUSG00000035642.17	Aamdc	chr7	protein_coding	adipogenesis associated Mth938 domain containing
chr7	97266141;97280826	97280616;97285584	+	97266141	97285584	cassetteExon	0.5	100	100	ENSMUST00000156060.8	ENSMUSG00000035623.15	Rsf1	chr7	protein_coding	remodeling and spacing factor 1
chr7	97311788;97312817	97312785;97313767	+	97311788	97313767	cassetteExon	0.5	100	100	ENSMUST00000156060.8	ENSMUSG00000035623.15	Rsf1	chr7	protein_coding	remodeling and spacing factor 1
chr7	97323842;97324007	97323952;97325363	+	97323842	97325363	cassetteExon	0.5	100	100	ENSMUST00000156060.8	ENSMUSG00000035623.15	Rsf1	chr7	protein_coding	remodeling and spacing factor 1
chr7	97345674	97345915	-	97345674	97345783	5pMXE	0.5	50	50	ENSMUST00000147690.2	ENSMUSG00000086993.2	Rsf1os2	chr7	lncRNA	remodeling and spacing factor 1, opposite strand 2
chr7	97346076	97360907	+	97346076;97354932	97354796;97360907	ES	0.5	50	50	ENSMUST00000026506.5	ENSMUSG00000025439.6	Clns1a	chr7	protein_coding	chloride channel, nucleotide-sensitive, 1A
chr7	97375911	97386576	-	97375911;97378294	97378178;97386576	ES	0.5	50	50	ENSMUST00000206389.2	ENSMUSG00000042797.10	Aqp11	chr7	protein_coding	aquaporin 11
chr7	97378294	97379549	-	97378294	97386576	A5SS	0.5	50	50	ENSMUST00000206389.2	ENSMUSG00000042797.10	Aqp11	chr7	protein_coding	aquaporin 11
chr7	97375911	97386576	-	97375911	97378178	5pMXE	0.5	50	50	ENSMUST00000205784.2	ENSMUSG00000042797.10	Aqp11	chr7	protein_coding	aquaporin 11
chr7	97492348	97503643	+	97438181	97503643	A5SS	0.5	50	50	ENSMUST00000205757.2	ENSMUSG00000030774.14	Pak1	chr7	protein_coding	p21 (RAC1) activated kinase 1
chr7	97520819	97532679	+	97520819	97543172	A3SS	0.5	50	50	ENSMUST00000156637.3	ENSMUSG00000030774.14	Pak1	chr7	protein_coding	p21 (RAC1) activated kinase 1
chr7	97538227	97543172	+	97520819	97543172	A5SS	0.5	50	50	ENSMUST00000156637.3	ENSMUSG00000030774.14	Pak1	chr7	protein_coding	p21 (RAC1) activated kinase 1
chr7	97734728;97739620	97739567;97740229	-	97734728	97740229	cassetteExon	0.5	100	100	ENSMUST00000107128.8	ENSMUSG00000030761.17	Myo7a	chr7	protein_coding	myosin VIIA
chr7	97747578;97748698	97748681;97751757	-	97747578	97751757	cassetteExon	0.5	100	100	ENSMUST00000107128.8	ENSMUSG00000030761.17	Myo7a	chr7	protein_coding	myosin VIIA
chr7	97756312;97761408	97761372;97766923	-	97756312	97766923	cassetteExon	0.5	100	100	ENSMUST00000107128.8	ENSMUSG00000030761.17	Myo7a	chr7	protein_coding	myosin VIIA
chr7	97713516	97713941	-	97713444	97713941	A3SS	0.5	50	50	ENSMUST00000107128.8	ENSMUSG00000030761.17	Myo7a	chr7	protein_coding	myosin VIIA
chr7	97714988	97715548	-	97715102	97715548	A3SS	0.5	50	50	ENSMUST00000107128.8	ENSMUSG00000030761.17	Myo7a	chr7	protein_coding	myosin VIIA
chr7	97702447	97703019	-	97702447	97703013	A5SS	0.5	50	50	ENSMUST00000107128.8	ENSMUSG00000030761.17	Myo7a	chr7	protein_coding	myosin VIIA
chr7	97732873	97733835	-	97732873	97734591	A5SS	0.5	50	50	ENSMUST00000107128.8	ENSMUSG00000030761.17	Myo7a	chr7	protein_coding	myosin VIIA
chr7	97751909	97752394	-	97751909	97756199	A5SS	0.5	50	50	ENSMUST00000107128.8	ENSMUSG00000030761.17	Myo7a	chr7	protein_coding	myosin VIIA
chr7	97756312	97758349	-	97756312	97766923	A5SS	0.25	50	50	ENSMUST00000107128.8	ENSMUSG00000030761.17	Myo7a	chr7	protein_coding	myosin VIIA
chr7	97756312	97760517	-	97756312	97766923	A5SS	0.25	50	50	ENSMUST00000107128.8	ENSMUSG00000030761.17	Myo7a	chr7	protein_coding	myosin VIIA
chr7	97756312	97760517	-	97756312	97758349	5pMXE	0.25	50	50	ENSMUST00000084979.11	ENSMUSG00000030761.17	Myo7a	chr7	protein_coding	myosin VIIA
chr7	97756312	97761372	-	97756312	97758349	5pMXE	0.25	50	50	ENSMUST00000084979.11	ENSMUSG00000030761.17	Myo7a	chr7	protein_coding	myosin VIIA
chr7	97761408	97766923	-	97761408	97761815	5pMXE	0.5	50	50	ENSMUST00000153657.8	ENSMUSG00000030761.17	Myo7a	chr7	protein_coding	myosin VIIA
chr7	97758122	97761372	-	97756312	97761372	A3SS	0.5	50	50	ENSMUST00000153657.8	ENSMUSG00000030761.17	Myo7a	chr7	protein_coding	myosin VIIA
chr7	97756312	97760517	-	97756312	97761372	A5SS	0.33	50	50	ENSMUST00000153657.8	ENSMUSG00000030761.17	Myo7a	chr7	protein_coding	myosin VIIA
chr7	97794963	97801019	-	97785175	97801019	A3SS	0.5	50	50	ENSMUST00000040971.14	ENSMUSG00000035547.15	Capn5	chr7	protein_coding	calpain 5
chr7	97811317	97811483	-	97811317	97827251	A5SS	0.25	50	50	ENSMUST00000040971.14	ENSMUSG00000035547.15	Capn5	chr7	protein_coding	calpain 5
chr7	97811317	97813918	-	97811317	97827251	A5SS	0.25	50	50	ENSMUST00000040971.14	ENSMUSG00000035547.15	Capn5	chr7	protein_coding	calpain 5
chr7	97811317	97814322	-	97811317	97827251	A5SS	0.25	50	50	ENSMUST00000040971.14	ENSMUSG00000035547.15	Capn5	chr7	protein_coding	calpain 5
chr7	97811317	97813918	-	97811317	97811483	5pMXE	0.25	50	50	ENSMUST00000107112.2	ENSMUSG00000035547.15	Capn5	chr7	protein_coding	calpain 5
chr7	97811317	97814322	-	97811317	97811483	5pMXE	0.25	50	50	ENSMUST00000107112.2	ENSMUSG00000035547.15	Capn5	chr7	protein_coding	calpain 5
chr7	97811317	97814322	-	97811317	97813918	5pMXE	0.25	50	50	ENSMUST00000155056.2	ENSMUSG00000035547.15	Capn5	chr7	protein_coding	calpain 5
chr7	97826695	97827629	+	97826695	97828532	A3SS	0.5	50	50	ENSMUST00000205893.2	ENSMUSG00000097749.3	Gm16938	chr7	lncRNA	predicted gene, 16938
chr7	97906984	97910794	-	97906984;97908664	97908612;97910794	ES	0.5	50	50	ENSMUST00000033020.14	ENSMUSG00000030760.15	Acer3	chr7	protein_coding	alkaline ceramidase 3
chr7	97915454	97970332	-	97915454	97958555	5pMXE	0.5	50	50	ENSMUST00000033020.14	ENSMUSG00000030760.15	Acer3	chr7	protein_coding	alkaline ceramidase 3
chr7	97875707;97879820	97879657;97893156	-	97875707	97893156	cassetteExon	0.5	100	100	ENSMUST00000033020.14	ENSMUSG00000030760.15	Acer3	chr7	protein_coding	alkaline ceramidase 3
chr7	98002337	98008565	-	98002337;98002823	98002684;98008565	ES	0.5	50	50	ENSMUST00000094161.11	ENSMUSG00000049580.13	Tsku	chr7	protein_coding	tsukushi, small leucine rich proteoglycan
chr7	98002337	98009228	-	98002337	98002684	A5SS&ES	0.16	50	50	ENSMUST00000094161.11	ENSMUSG00000049580.13	Tsku	chr7	protein_coding	tsukushi, small leucine rich proteoglycan
chr7	98002337	98010366	-	98002337	98002684	A5SS&ES	0.16	50	50	ENSMUST00000094161.11	ENSMUSG00000049580.13	Tsku	chr7	protein_coding	tsukushi, small leucine rich proteoglycan
chr7	98002337	98010485	-	98002337	98002684	A5SS&ES	0.16	50	50	ENSMUST00000094161.11	ENSMUSG00000049580.13	Tsku	chr7	protein_coding	tsukushi, small leucine rich proteoglycan
chr7	98008674	98009228	-	98008674	98010449	A5SS	0.5	50	50	ENSMUST00000094161.11	ENSMUSG00000049580.13	Tsku	chr7	protein_coding	tsukushi, small leucine rich proteoglycan
chr7	98002337	98010449	-	98002337;98008674	98008565;98010449	ES	0.5	50	50	ENSMUST00000164726.8	ENSMUSG00000049580.13	Tsku	chr7	protein_coding	tsukushi, small leucine rich proteoglycan
chr7	98002337	98009228	-	98002337	98008565	A5SS&ES	0.16	50	50	ENSMUST00000164726.8	ENSMUSG00000049580.13	Tsku	chr7	protein_coding	tsukushi, small leucine rich proteoglycan
chr7	98002337	98010366	-	98002337	98008565	A5SS&ES	0.16	50	50	ENSMUST00000164726.8	ENSMUSG00000049580.13	Tsku	chr7	protein_coding	tsukushi, small leucine rich proteoglycan
chr7	98002337	98010485	-	98002337	98008565	A5SS&ES	0.16	50	50	ENSMUST00000164726.8	ENSMUSG00000049580.13	Tsku	chr7	protein_coding	tsukushi, small leucine rich proteoglycan
chr7	98002337	98009228	-	98002337	98010366	A5SS	0.16	50	50	ENSMUST00000167405.3	ENSMUSG00000049580.13	Tsku	chr7	protein_coding	tsukushi, small leucine rich proteoglycan
chr7	98002337	98010449	-	98002337	98010366	A5SS	0.16	50	50	ENSMUST00000167405.3	ENSMUSG00000049580.13	Tsku	chr7	protein_coding	tsukushi, small leucine rich proteoglycan
chr7	98002337	98010485	-	98002337	98010366	A5SS	0.16	50	50	ENSMUST00000167405.3	ENSMUSG00000049580.13	Tsku	chr7	protein_coding	tsukushi, small leucine rich proteoglycan
chr7	98002337	98009228	-	98002337	98010485	A5SS	0.16	50	50	ENSMUST00000165257.8	ENSMUSG00000049580.13	Tsku	chr7	protein_coding	tsukushi, small leucine rich proteoglycan
chr7	98002337	98010449	-	98002337	98010485	A5SS	0.16	50	50	ENSMUST00000165257.8	ENSMUSG00000049580.13	Tsku	chr7	protein_coding	tsukushi, small leucine rich proteoglycan
chr7	98002337	98010449	-	98002337	98009228	5pMXE	0.16	50	50	ENSMUST00000179780.3	ENSMUSG00000049580.13	Tsku	chr7	protein_coding	tsukushi, small leucine rich proteoglycan
chr7	98002337;98008674	98008565;98009228	-	98002337	98009228	cassetteExon	0.5	100	100	ENSMUST00000179780.3	ENSMUSG00000049580.13	Tsku	chr7	protein_coding	tsukushi, small leucine rich proteoglycan
chr7	98002337	98002684	-	98002337	98010449	A5SS	0.16	50	50	ENSMUST00000206414.2	ENSMUSG00000049580.13	Tsku	chr7	protein_coding	tsukushi, small leucine rich proteoglycan
chr7	98002337	98008565	-	98002823	98008565	3pMXE	0.5	50	50	ENSMUST00000206770.2	ENSMUSG00000049580.13	Tsku	chr7	protein_coding	tsukushi, small leucine rich proteoglycan
chr7	98120766	98121496	+	98120395	98121496	A5SS	0.5	50	50	ENSMUST00000206435.2	ENSMUSG00000074003.5	Gucy2d	chr7	protein_coding	guanylate cyclase 2d
chr7	98139304	98143421	+	98138601	98143421	A5SS	0.5	50	50	ENSMUST00000205937.2	ENSMUSG00000090958.3	Lrrc32	chr7	protein_coding	leucine rich repeat containing 32
chr7	98240091	98243959	-	98240091;98243017	98242538;98243959	ES	0.25	50	50	ENSMUST00000205276.2	ENSMUSG00000035401.10	Emsy	chr7	protein_coding	EMSY, BRCA2-interacting transcriptional repressor
chr7	98246391	98251790	-	98246391;98250034	98249879;98251790	ES	0.5	50	50	ENSMUST00000205276.2	ENSMUSG00000035401.10	Emsy	chr7	protein_coding	EMSY, BRCA2-interacting transcriptional repressor
chr7	98250034	98259874	-	98250034;98251954	98251790;98259874	ES	0.33	50	50	ENSMUST00000205276.2	ENSMUSG00000035401.10	Emsy	chr7	protein_coding	EMSY, BRCA2-interacting transcriptional repressor
chr7	98290875	98295656	-	98290875;98294415	98294374;98295656	ES	0.5	50	50	ENSMUST00000205276.2	ENSMUSG00000035401.10	Emsy	chr7	protein_coding	EMSY, BRCA2-interacting transcriptional repressor
chr7	98246391;98249000	98248959;98249879	-	98246391	98249879	cassetteExon	0.5	100	100	ENSMUST00000205276.2	ENSMUSG00000035401.10	Emsy	chr7	protein_coding	EMSY, BRCA2-interacting transcriptional repressor
chr7	98286727;98289090	98288938;98290700	-	98286727	98290700	cassetteExon	0.5	100	100	ENSMUST00000205276.2	ENSMUSG00000035401.10	Emsy	chr7	protein_coding	EMSY, BRCA2-interacting transcriptional repressor
chr7	98242873	98243959	-	98243017	98243959	A3SS	0.25	50	50	ENSMUST00000205276.2	ENSMUSG00000035401.10	Emsy	chr7	protein_coding	EMSY, BRCA2-interacting transcriptional repressor
chr7	98243192	98243959	-	98243017	98243959	A3SS	0.25	50	50	ENSMUST00000205276.2	ENSMUSG00000035401.10	Emsy	chr7	protein_coding	EMSY, BRCA2-interacting transcriptional repressor
chr7	98240091	98243959	-	98240091;98242873	98242538;98243959	ES	0.25	50	50	ENSMUST00000205911.2	ENSMUSG00000035401.10	Emsy	chr7	protein_coding	EMSY, BRCA2-interacting transcriptional repressor
chr7	98246391;98250034	98249879;98259874	-	98246391	98259874	cassetteExon	0.5	100	100	ENSMUST00000205911.2	ENSMUSG00000035401.10	Emsy	chr7	protein_coding	EMSY, BRCA2-interacting transcriptional repressor
chr7	98246391;98251954	98251790;98259874	-	98246391	98259874	cassetteExon	0.5	100	100	ENSMUST00000205911.2	ENSMUSG00000035401.10	Emsy	chr7	protein_coding	EMSY, BRCA2-interacting transcriptional repressor
chr7	98290875;98295730	98295656;98297012	-	98290875	98297012	cassetteExon	0.5	100	100	ENSMUST00000205911.2	ENSMUSG00000035401.10	Emsy	chr7	protein_coding	EMSY, BRCA2-interacting transcriptional repressor
chr7	98243192	98243959	-	98242873	98243959	A3SS	0.25	50	50	ENSMUST00000205911.2	ENSMUSG00000035401.10	Emsy	chr7	protein_coding	EMSY, BRCA2-interacting transcriptional repressor
chr7	98246391	98248959	-	98246391	98259874	A5SS	0.25	50	50	ENSMUST00000205911.2	ENSMUSG00000035401.10	Emsy	chr7	protein_coding	EMSY, BRCA2-interacting transcriptional repressor
chr7	98290875	98294374	-	98290875	98297012	A5SS	0.33	50	50	ENSMUST00000205911.2	ENSMUSG00000035401.10	Emsy	chr7	protein_coding	EMSY, BRCA2-interacting transcriptional repressor
chr7	98243192	98243959	-	98240091	98243959	A3SS	0.25	50	50	ENSMUST00000038359.6	ENSMUSG00000035401.10	Emsy	chr7	protein_coding	EMSY, BRCA2-interacting transcriptional repressor
chr7	98246391;98251954	98251790;98259874	-	98246391;98250034	98249879;98259874	MXE	0.5	100	100	ENSMUST00000205886.2	ENSMUSG00000035401.10	Emsy	chr7	protein_coding	EMSY, BRCA2-interacting transcriptional repressor
chr7	98246391	98248959	-	98246391	98251790	A5SS	0.25	50	50	ENSMUST00000206626.2	ENSMUSG00000035401.10	Emsy	chr7	protein_coding	EMSY, BRCA2-interacting transcriptional repressor
chr7	98246391	98251790	-	98250034	98251790	3pMXE	0.5	50	50	ENSMUST00000205485.2	ENSMUSG00000035401.10	Emsy	chr7	protein_coding	EMSY, BRCA2-interacting transcriptional repressor
chr7	98250034	98259874	-	98250034	98251790	5pMXE	0.5	50	50	ENSMUST00000205485.2	ENSMUSG00000035401.10	Emsy	chr7	protein_coding	EMSY, BRCA2-interacting transcriptional repressor
chr7	98246391	98259874	-	98251954	98259874	3pMXE	0.33	50	50	ENSMUST00000206619.2	ENSMUSG00000035401.10	Emsy	chr7	protein_coding	EMSY, BRCA2-interacting transcriptional repressor
chr7	98250034	98259874	-	98251954	98259874	3pMXE	0.33	50	50	ENSMUST00000206619.2	ENSMUSG00000035401.10	Emsy	chr7	protein_coding	EMSY, BRCA2-interacting transcriptional repressor
chr7	98290875	98295656	-	98290875	98294374	5pMXE	0.33	50	50	ENSMUST00000206256.2	ENSMUSG00000035401.10	Emsy	chr7	protein_coding	EMSY, BRCA2-interacting transcriptional repressor
chr7	98356324	98359333	+	98356324;98357238	98357144;98359333	ES	0.5	50	50	ENSMUST00000126356.8	ENSMUSG00000030753.16	Thap12	chr7	protein_coding	THAP domain containing 12
chr7	98362160	98364189	+	98362102	98364189	A5SS	0.5	50	50	ENSMUST00000126356.8	ENSMUSG00000030753.16	Thap12	chr7	protein_coding	THAP domain containing 12
chr7	98484555;98485428	98485269;98488215	+	98484555	98488215	cassetteExon	0.5	100	100	ENSMUST00000165122.8	ENSMUSG00000015957.13	Wnt11	chr7	protein_coding	wingless-type MMTV integration site family, member 11
chr7	98488397	98495663	+	98488397	98495581	A3SS	0.5	50	50	ENSMUST00000165122.8	ENSMUSG00000015957.13	Wnt11	chr7	protein_coding	wingless-type MMTV integration site family, member 11
chr7	98496494	98499434	+	98496658	98499434	A5SS	0.33	50	50	ENSMUST00000163913.8	ENSMUSG00000015957.13	Wnt11	chr7	protein_coding	wingless-type MMTV integration site family, member 11
chr7	98498424	98499434	+	98496658	98499434	A5SS	0.33	50	50	ENSMUST00000163913.8	ENSMUSG00000015957.13	Wnt11	chr7	protein_coding	wingless-type MMTV integration site family, member 11
chr7	98498424	98499434	+	98496494	98499434	A5SS	0.33	50	50	ENSMUST00000165240.2	ENSMUSG00000015957.13	Wnt11	chr7	protein_coding	wingless-type MMTV integration site family, member 11
chr7	98537799;98549210	98548857;98555699	-	98537799	98555699	cassetteExon	0.5	100	100	ENSMUST00000037968.10	ENSMUSG00000035354.10	Uvrag	chr7	protein_coding	UV radiation resistance associated gene
chr7	98629008;98633473	98633298;98637391	-	98629008	98637391	cassetteExon	0.5	100	100	ENSMUST00000037968.10	ENSMUSG00000035354.10	Uvrag	chr7	protein_coding	UV radiation resistance associated gene
chr7	98737382;98741478	98741366;98748519	-	98737382	98748519	cassetteExon	0.5	100	100	ENSMUST00000037968.10	ENSMUSG00000035354.10	Uvrag	chr7	protein_coding	UV radiation resistance associated gene
chr7	98705361	98715007	-	98665881	98715007	A3SS	0.5	50	50	ENSMUST00000037968.10	ENSMUSG00000035354.10	Uvrag	chr7	protein_coding	UV radiation resistance associated gene
chr7	98761586	98767395	-	98758304	98767395	A3SS	0.5	50	50	ENSMUST00000037968.10	ENSMUSG00000035354.10	Uvrag	chr7	protein_coding	UV radiation resistance associated gene
chr7	98589176	98592992	-	98589176	98628843	A5SS	0.5	50	50	ENSMUST00000037968.10	ENSMUSG00000035354.10	Uvrag	chr7	protein_coding	UV radiation resistance associated gene
chr7	98554741	98554951	+	98553846	98554951	A5SS	0.5	50	50	ENSMUST00000209090.2	ENSMUSG00000109130.2	Gm45187	chr7	lncRNA	predicted gene 45187
chr7	98814396;98818728	98818631;98818905	-	98814396	98818905	cassetteExon	0.5	100	100	ENSMUST00000033001.6	ENSMUSG00000030747.6	Dgat2	chr7	protein_coding	diacylglycerol O-acyltransferase 2
chr7	98818215	98818905	-	98814396	98818905	A3SS	0.25	50	50	ENSMUST00000033001.6	ENSMUSG00000030747.6	Dgat2	chr7	protein_coding	diacylglycerol O-acyltransferase 2
chr7	98819033	98829423	-	98819033	98831599	A5SS	0.33	50	50	ENSMUST00000033001.6	ENSMUSG00000030747.6	Dgat2	chr7	protein_coding	diacylglycerol O-acyltransferase 2
chr7	98819033	98831479	-	98819033	98831599	A5SS	0.33	50	50	ENSMUST00000033001.6	ENSMUSG00000030747.6	Dgat2	chr7	protein_coding	diacylglycerol O-acyltransferase 2
chr7	98814396	98818905	-	98808244	98818905	A3SS	0.25	50	50	ENSMUST00000207491.2	ENSMUSG00000030747.6	Dgat2	chr7	protein_coding	diacylglycerol O-acyltransferase 2
chr7	98818215	98818905	-	98808244	98818905	A3SS	0.25	50	50	ENSMUST00000207491.2	ENSMUSG00000030747.6	Dgat2	chr7	protein_coding	diacylglycerol O-acyltransferase 2
chr7	98818728	98818905	-	98808244	98818905	A3SS	0.25	50	50	ENSMUST00000207491.2	ENSMUSG00000030747.6	Dgat2	chr7	protein_coding	diacylglycerol O-acyltransferase 2
chr7	98808244	98813842	-	98808244	98818905	A5SS	0.5	50	50	ENSMUST00000207491.2	ENSMUSG00000030747.6	Dgat2	chr7	protein_coding	diacylglycerol O-acyltransferase 2
chr7	98819033	98829423	-	98819033	98831479	A5SS	0.33	50	50	ENSMUST00000207491.2	ENSMUSG00000030747.6	Dgat2	chr7	protein_coding	diacylglycerol O-acyltransferase 2
chr7	98818215	98818905	-	98818728	98818905	A3SS&ES	0.25	50	50	ENSMUST00000208591.2	ENSMUSG00000030747.6	Dgat2	chr7	protein_coding	diacylglycerol O-acyltransferase 2
chr7	98875838	98881665	-	98872912	98881665	A3SS	0.5	50	50	ENSMUST00000064231.8	ENSMUSG00000052396.8	Mogat2	chr7	protein_coding	monoacylglycerol O-acyltransferase 2
chr7	98965109;98966875	98966679;98985192	+	98965109	98985192	cassetteExon	0.5	100	100	ENSMUST00000122101.8	ENSMUSG00000055407.15	Map6	chr7	protein_coding	microtubule-associated protein 6
chr7	98966875	98969706	+	98966875	98985192	A3SS	0.5	50	50	ENSMUST00000068973.11	ENSMUSG00000055407.15	Map6	chr7	protein_coding	microtubule-associated protein 6
chr7	98965109	98985192	+	98965109	98966679	3pMXE	0.5	50	50	ENSMUST00000127492.2	ENSMUSG00000055407.15	Map6	chr7	protein_coding	microtubule-associated protein 6
chr7	98998671	99001031	-	98998671	99002089	A5SS	0.25	50	50	ENSMUST00000169437.9	ENSMUSG00000070436.13	Serpinh1	chr7	protein_coding	serine (or cysteine) peptidase inhibitor, clade H, member 1
chr7	98998671	99002094	-	98998671	99002089	A5SS	0.25	50	50	ENSMUST00000169437.9	ENSMUSG00000070436.13	Serpinh1	chr7	protein_coding	serine (or cysteine) peptidase inhibitor, clade H, member 1
chr7	98998671	99002260	-	98998671	99002089	A5SS	0.25	50	50	ENSMUST00000169437.9	ENSMUSG00000070436.13	Serpinh1	chr7	protein_coding	serine (or cysteine) peptidase inhibitor, clade H, member 1
chr7	98998671;99001074	99001031;99002260	-	98998671	99002260	cassetteExon	0.5	100	100	ENSMUST00000094154.6	ENSMUSG00000070436.13	Serpinh1	chr7	protein_coding	serine (or cysteine) peptidase inhibitor, clade H, member 1
chr7	98998671;99002172	99002089;99002260	-	98998671	99002260	cassetteExon	0.5	100	100	ENSMUST00000094154.6	ENSMUSG00000070436.13	Serpinh1	chr7	protein_coding	serine (or cysteine) peptidase inhibitor, clade H, member 1
chr7	98998671;99002172	99002094;99002260	-	98998671	99002260	cassetteExon	0.5	100	100	ENSMUST00000094154.6	ENSMUSG00000070436.13	Serpinh1	chr7	protein_coding	serine (or cysteine) peptidase inhibitor, clade H, member 1
chr7	98998671;99001074	99001031;99002260	-	98998671;99002172	99002089;99002260	MXE	0.5	100	100	ENSMUST00000208119.2	ENSMUSG00000070436.13	Serpinh1	chr7	protein_coding	serine (or cysteine) peptidase inhibitor, clade H, member 1
chr7	98998671;99002172	99002094;99002260	-	98998671;99001074	99001031;99002260	MXE	0.5	100	100	ENSMUST00000207849.2	ENSMUSG00000070436.13	Serpinh1	chr7	protein_coding	serine (or cysteine) peptidase inhibitor, clade H, member 1
chr7	99001074;99002172	99002094;99002260	-	99001074	99002260	cassetteExon	0.5	100	100	ENSMUST00000207849.2	ENSMUSG00000070436.13	Serpinh1	chr7	protein_coding	serine (or cysteine) peptidase inhibitor, clade H, member 1
chr7	98998671	99002094	-	98998671;99001074	99001031;99002094	ES	0.5	50	50	ENSMUST00000208749.2	ENSMUSG00000070436.13	Serpinh1	chr7	protein_coding	serine (or cysteine) peptidase inhibitor, clade H, member 1
chr7	98998671	99002260	-	98998671	99002094	A5SS	0.25	50	50	ENSMUST00000207989.2	ENSMUSG00000070436.13	Serpinh1	chr7	protein_coding	serine (or cysteine) peptidase inhibitor, clade H, member 1
chr7	99001074	99002260	-	99001074	99002094	5pMXE	0.5	50	50	ENSMUST00000208292.2	ENSMUSG00000070436.13	Serpinh1	chr7	protein_coding	serine (or cysteine) peptidase inhibitor, clade H, member 1
chr7	99036395;99054406	99054299;99059616	+	99036395	99059616	cassetteExon	0.5	100	100	ENSMUST00000037528.10	ENSMUSG00000035314.11	Gdpd5	chr7	protein_coding	glycerophosphodiester phosphodiesterase domain containing 5
chr7	99105741;99106218	99106204;99107981	+	99105741	99107981	cassetteExon	0.5	100	100	ENSMUST00000037528.10	ENSMUSG00000035314.11	Gdpd5	chr7	protein_coding	glycerophosphodiester phosphodiesterase domain containing 5
chr7	99035168	99036311	+	99031415	99036311	A5SS	0.5	50	50	ENSMUST00000037528.10	ENSMUSG00000035314.11	Gdpd5	chr7	protein_coding	glycerophosphodiester phosphodiesterase domain containing 5
chr7	99063931	99073260	+	99059698	99073260	A5SS	0.5	50	50	ENSMUST00000037528.10	ENSMUSG00000035314.11	Gdpd5	chr7	protein_coding	glycerophosphodiester phosphodiesterase domain containing 5
chr7	99118311	99120164	+	99118311;99119555	99119371;99120164	ES	0.5	50	50	ENSMUST00000037359.9	ENSMUSG00000035298.9	Klhl35	chr7	protein_coding	kelch-like 35
chr7	99122137	99122403	+	99122137	99122914	A3SS	0.5	50	50	ENSMUST00000037359.9	ENSMUSG00000035298.9	Klhl35	chr7	protein_coding	kelch-like 35
chr7	99118311	99120164	+	99119555	99120164	5pMXE	0.5	50	50	ENSMUST00000142339.2	ENSMUSG00000035298.9	Klhl35	chr7	protein_coding	kelch-like 35
chr7	99128534	99130904	-	99129270	99130904	A3SS&ES	0.5	50	50	ENSMUST00000032998.13	ENSMUSG00000030744.14	Rps3	chr7	protein_coding	ribosomal protein S3
chr7	99232927	99237205	+	99232927;99236466	99236422;99237205	ES	0.5	50	50	ENSMUST00000098266.9	ENSMUSG00000018909.16	Arrb1	chr7	protein_coding	arrestin, beta 1
chr7	99245313	99247698	+	99245313;99246266	99246243;99247698	ES	0.5	50	50	ENSMUST00000098266.9	ENSMUSG00000018909.16	Arrb1	chr7	protein_coding	arrestin, beta 1
chr7	99245313	99247504	+	99245313	99246243	A3SS&ES	0.33	50	50	ENSMUST00000098266.9	ENSMUSG00000018909.16	Arrb1	chr7	protein_coding	arrestin, beta 1
chr7	99249059	99249211	+	99249059	99250305	A3SS	0.5	50	50	ENSMUST00000098266.9	ENSMUSG00000018909.16	Arrb1	chr7	protein_coding	arrestin, beta 1
chr7	99189086	99231468	+	99185005	99231468	A5SS	0.33	50	50	ENSMUST00000098266.9	ENSMUSG00000018909.16	Arrb1	chr7	protein_coding	arrestin, beta 1
chr7	99222397	99231468	+	99185005	99231468	A5SS	0.33	50	50	ENSMUST00000098266.9	ENSMUSG00000018909.16	Arrb1	chr7	protein_coding	arrestin, beta 1
chr7	99245313	99247504	+	99245313	99247504	A3SS	0.33	50	0	ENSMUST00000179755.8	ENSMUSG00000018909.16	Arrb1	chr7	protein_coding	arrestin, beta 1
chr7	99245313	99247698	+	99245313	99247504	A3SS&ES	0.33	50	0	ENSMUST00000179755.8	ENSMUSG00000018909.16	Arrb1	chr7	protein_coding	arrestin, beta 1
chr7	99247504	99247672	+	99247504	99247672	A5SS	1	50	0	ENSMUST00000179755.8	ENSMUSG00000018909.16	Arrb1	chr7	protein_coding	arrestin, beta 1
chr7	99222397	99231468	+	99189086	99231468	A5SS	0.33	50	50	ENSMUST00000161525.2	ENSMUSG00000018909.16	Arrb1	chr7	protein_coding	arrestin, beta 1
chr7	99309327	99310311	-	99309383	99310311	A3SS	0.5	50	50	ENSMUST00000032985.11	ENSMUSG00000030737.18	Slco2b1	chr7	protein_coding	solute carrier organic anion transporter family, member 2b1
chr7	99341100	99344270	-	99341100	99360470	A5SS	0.25	50	50	ENSMUST00000032985.11	ENSMUSG00000030737.18	Slco2b1	chr7	protein_coding	solute carrier organic anion transporter family, member 2b1
chr7	99341100	99344742	-	99341100	99360470	A5SS	0.25	50	50	ENSMUST00000032985.11	ENSMUSG00000030737.18	Slco2b1	chr7	protein_coding	solute carrier organic anion transporter family, member 2b1
chr7	99341100	99355718	-	99341100	99360470	A5SS	0.25	50	50	ENSMUST00000032985.11	ENSMUSG00000030737.18	Slco2b1	chr7	protein_coding	solute carrier organic anion transporter family, member 2b1
chr7	99341100	99355718	-	99341100	99344742	5pMXE	0.25	50	50	ENSMUST00000107086.9	ENSMUSG00000030737.18	Slco2b1	chr7	protein_coding	solute carrier organic anion transporter family, member 2b1
chr7	99341100;99344424	99344270;99344742	-	99341100	99344742	cassetteExon	0.5	100	100	ENSMUST00000107086.9	ENSMUSG00000030737.18	Slco2b1	chr7	protein_coding	solute carrier organic anion transporter family, member 2b1
chr7	99341100;99344574	99344270;99344742	-	99341100	99344742	cassetteExon	0.5	100	100	ENSMUST00000107086.9	ENSMUSG00000030737.18	Slco2b1	chr7	protein_coding	solute carrier organic anion transporter family, member 2b1
chr7	99341100	99344270	-	99341100	99355718	A5SS	0.25	50	50	ENSMUST00000107088.8	ENSMUSG00000030737.18	Slco2b1	chr7	protein_coding	solute carrier organic anion transporter family, member 2b1
chr7	99344574	99344742	-	99344424	99344742	A3SS	0.33	50	50	ENSMUST00000208225.2	ENSMUSG00000030737.18	Slco2b1	chr7	protein_coding	solute carrier organic anion transporter family, member 2b1
chr7	99344424	99344767	-	99344424	99344742	A5SS	0.5	50	50	ENSMUST00000208225.2	ENSMUSG00000030737.18	Slco2b1	chr7	protein_coding	solute carrier organic anion transporter family, member 2b1
chr7	99344424	99344767	-	99344574	99344767	A3SS	0.5	50	50	ENSMUST00000145381.8	ENSMUSG00000030737.18	Slco2b1	chr7	protein_coding	solute carrier organic anion transporter family, member 2b1
chr7	99341100	99344742	-	99341100	99344270	A5SS&ES	0.5	50	50	ENSMUST00000145381.8	ENSMUSG00000030737.18	Slco2b1	chr7	protein_coding	solute carrier organic anion transporter family, member 2b1
chr7	99344574	99344742	-	99344574	99344767	A5SS	0.5	50	50	ENSMUST00000145381.8	ENSMUSG00000030737.18	Slco2b1	chr7	protein_coding	solute carrier organic anion transporter family, member 2b1
chr7	99314415	99316104	+	99310868	99316104	A5SS	0.33	50	50	ENSMUST00000131160.3	ENSMUSG00000085095.3	Gm15635	chr7	lncRNA	predicted gene 15635
chr7	99315007	99316104	+	99310868	99316104	A5SS	0.33	50	50	ENSMUST00000131160.3	ENSMUSG00000085095.3	Gm15635	chr7	lncRNA	predicted gene 15635
chr7	99314415;99315007	99314650;99316104	+	99314415	99316104	cassetteExon	0.5	100	100	ENSMUST00000148972.2	ENSMUSG00000085095.3	Gm15635	chr7	lncRNA	predicted gene 15635
chr7	99412768	99416306	+	99412768	99416330	A3SS	0.5	50	50	ENSMUST00000220001.2	ENSMUSG00000073997.4	Olfr521	chr7	protein_coding	olfactory receptor 521
chr7	99498266	99511592	-	99498266	99507971	5pMXE	0.16	50	50	ENSMUST00000036274.8	ENSMUSG00000035227.8	Spcs2	chr7	protein_coding	signal peptidase complex subunit 2 homolog (S. cerevisiae)
chr7	99498266	99512028	-	99498266	99507971	5pMXE	0.16	50	50	ENSMUST00000036274.8	ENSMUSG00000035227.8	Spcs2	chr7	protein_coding	signal peptidase complex subunit 2 homolog (S. cerevisiae)
chr7	99498266	99512435	-	99498266	99507971	5pMXE	0.16	50	50	ENSMUST00000036274.8	ENSMUSG00000035227.8	Spcs2	chr7	protein_coding	signal peptidase complex subunit 2 homolog (S. cerevisiae)
chr7	99489090;99490031	99489899;99493907	-	99489090	99493907	cassetteExon	0.5	100	100	ENSMUST00000036274.8	ENSMUSG00000035227.8	Spcs2	chr7	protein_coding	signal peptidase complex subunit 2 homolog (S. cerevisiae)
chr7	99498266;99498459	99498364;99507971	-	99498266	99507971	cassetteExon	0.5	100	100	ENSMUST00000036274.8	ENSMUSG00000035227.8	Spcs2	chr7	protein_coding	signal peptidase complex subunit 2 homolog (S. cerevisiae)
chr7	99498266;99505721	99505620;99507971	-	99498266	99507971	cassetteExon	0.5	100	100	ENSMUST00000036274.8	ENSMUSG00000035227.8	Spcs2	chr7	protein_coding	signal peptidase complex subunit 2 homolog (S. cerevisiae)
chr7	99493966	99498183	-	99497666	99498183	A3SS&ES	0.5	50	50	ENSMUST00000036274.8	ENSMUSG00000035227.8	Spcs2	chr7	protein_coding	signal peptidase complex subunit 2 homolog (S. cerevisiae)
chr7	99498266;99505721	99505620;99507971	-	99498266;99498459	99498364;99507971	MXE	0.5	100	100	ENSMUST00000208477.2	ENSMUSG00000035227.8	Spcs2	chr7	protein_coding	signal peptidase complex subunit 2 homolog (S. cerevisiae)
chr7	99498266	99512435	-	99498266;99512201	99512028;99512435	ES	0.33	50	50	ENSMUST00000207137.2	ENSMUSG00000035227.8	Spcs2	chr7	protein_coding	signal peptidase complex subunit 2 homolog (S. cerevisiae)
chr7	99498266;99511736	99511592;99512435	-	99498266;99512201	99512028;99512435	MXE	0.5	100	100	ENSMUST00000207137.2	ENSMUSG00000035227.8	Spcs2	chr7	protein_coding	signal peptidase complex subunit 2 homolog (S. cerevisiae)
chr7	99498266	99498364	-	99498266	99512028	A5SS	0.16	50	50	ENSMUST00000207137.2	ENSMUSG00000035227.8	Spcs2	chr7	protein_coding	signal peptidase complex subunit 2 homolog (S. cerevisiae)
chr7	99498266	99505620	-	99498266	99512028	A5SS	0.16	50	50	ENSMUST00000207137.2	ENSMUSG00000035227.8	Spcs2	chr7	protein_coding	signal peptidase complex subunit 2 homolog (S. cerevisiae)
chr7	99498266;99511736	99511592;99512435	-	99498266	99512435	cassetteExon	0.5	100	100	ENSMUST00000207063.2	ENSMUSG00000035227.8	Spcs2	chr7	protein_coding	signal peptidase complex subunit 2 homolog (S. cerevisiae)
chr7	99498266	99498364	-	99498266	99512435	A5SS	0.16	50	50	ENSMUST00000207063.2	ENSMUSG00000035227.8	Spcs2	chr7	protein_coding	signal peptidase complex subunit 2 homolog (S. cerevisiae)
chr7	99498266	99505620	-	99498266	99512435	A5SS	0.16	50	50	ENSMUST00000207063.2	ENSMUSG00000035227.8	Spcs2	chr7	protein_coding	signal peptidase complex subunit 2 homolog (S. cerevisiae)
chr7	99498266	99498364	-	99498266	99511592	A5SS	0.16	50	50	ENSMUST00000207580.2	ENSMUSG00000035227.8	Spcs2	chr7	protein_coding	signal peptidase complex subunit 2 homolog (S. cerevisiae)
chr7	99498266	99505620	-	99498266	99511592	A5SS	0.16	50	50	ENSMUST00000207580.2	ENSMUSG00000035227.8	Spcs2	chr7	protein_coding	signal peptidase complex subunit 2 homolog (S. cerevisiae)
chr7	99498266	99512435	-	99512201	99512435	3pMXE	0.33	50	50	ENSMUST00000208562.2	ENSMUSG00000035227.8	Spcs2	chr7	protein_coding	signal peptidase complex subunit 2 homolog (S. cerevisiae)
chr7	99511736	99512435	-	99512201	99512435	3pMXE	0.33	50	50	ENSMUST00000208562.2	ENSMUSG00000035227.8	Spcs2	chr7	protein_coding	signal peptidase complex subunit 2 homolog (S. cerevisiae)
chr7	99524433	99525374	+	99524433	99525425	A3SS	0.5	50	50	ENSMUST00000036155.10	ENSMUSG00000035211.10	Xrra1	chr7	protein_coding	X-ray radiation resistance associated 1
chr7	99528674	99530167	+	99528674	99535210	A3SS	0.5	50	50	ENSMUST00000036155.10	ENSMUSG00000035211.10	Xrra1	chr7	protein_coding	X-ray radiation resistance associated 1
chr7	99512885	99516554	+	99511564	99516554	A5SS	0.5	50	50	ENSMUST00000036155.10	ENSMUSG00000035211.10	Xrra1	chr7	protein_coding	X-ray radiation resistance associated 1
chr7	99524523;99524806	99524636;99537289	-	99524523	99537289	cassetteExon	0.5	100	100	ENSMUST00000207760.2	ENSMUSG00000109002.2	Gm38405	chr7	lncRNA	predicted gene, 38405
chr7	99524523	99537289	-	99524806	99537289	A3SS&ES	0.5	50	50	ENSMUST00000208548.2	ENSMUSG00000109002.2	Gm38405	chr7	lncRNA	predicted gene, 38405
chr7	99524806	99525492	-	99524806	99537289	A5SS	0.5	50	50	ENSMUST00000208548.2	ENSMUSG00000109002.2	Gm38405	chr7	lncRNA	predicted gene, 38405
chr7	99604747	99614449	-	99604747	99629179	A5SS	0.5	50	50	ENSMUST00000080817.6	ENSMUSG00000058761.6	Rnf169	chr7	protein_coding	ring finger protein 169
chr7	99676939	99678385	+	99676939;99678053	99677859;99678385	ES	0.5	50	50	ENSMUST00000032977.11	ENSMUSG00000030732.14	Chrdl2	chr7	protein_coding	chordin-like 2
chr7	99659326	99666185	+	99655854	99666185	A5SS	0.5	50	50	ENSMUST00000032977.11	ENSMUSG00000030732.14	Chrdl2	chr7	protein_coding	chordin-like 2
chr7	99749888	99757719	-	99749888;99755902	99755770;99757719	ES	0.5	50	50	ENSMUST00000032969.14	ENSMUSG00000030726.17	Pold3	chr7	protein_coding	polymerase (DNA-directed), delta 3, accessory subunit
chr7	99757758	99768881	-	99757758;99761579	99761477;99768881	ES	0.5	50	50	ENSMUST00000032969.14	ENSMUSG00000030726.17	Pold3	chr7	protein_coding	polymerase (DNA-directed), delta 3, accessory subunit
chr7	99768936;99769149	99769104;99770571	-	99768936	99770571	cassetteExon	0.5	100	100	ENSMUST00000032969.14	ENSMUSG00000030726.17	Pold3	chr7	protein_coding	polymerase (DNA-directed), delta 3, accessory subunit
chr7	99749888	99750563	-	99749888	99755770	A5SS	0.33	50	50	ENSMUST00000032969.14	ENSMUSG00000030726.17	Pold3	chr7	protein_coding	polymerase (DNA-directed), delta 3, accessory subunit
chr7	99768936	99770549	-	99768936	99770571	A5SS	0.33	50	50	ENSMUST00000032969.14	ENSMUSG00000030726.17	Pold3	chr7	protein_coding	polymerase (DNA-directed), delta 3, accessory subunit
chr7	99749888	99757719	-	99749888	99750563	5pMXE	0.33	50	50	ENSMUST00000208704.2	ENSMUSG00000030726.17	Pold3	chr7	protein_coding	polymerase (DNA-directed), delta 3, accessory subunit
chr7	99768936	99770549	-	99768936	99769104	A5SS&ES	0.33	50	50	ENSMUST00000208670.2	ENSMUSG00000030726.17	Pold3	chr7	protein_coding	polymerase (DNA-directed), delta 3, accessory subunit
chr7	99757758	99768881	-	99757758	99761477	A5SS&ES	0.5	50	50	ENSMUST00000208184.2	ENSMUSG00000030726.17	Pold3	chr7	protein_coding	polymerase (DNA-directed), delta 3, accessory subunit
chr7	99808725	99809381	+	99808954	99809381	A5SS	0.5	50	50	ENSMUST00000032967.4	ENSMUSG00000030725.5	Lipt2	chr7	protein_coding	lipoyl(octanoyl) transferase 2 (putative)
chr7	99830481	99831940	+	99830481	99831889	A3SS	0.5	50	50	ENSMUST00000208555.2	ENSMUSG00000035165.15	Kcne3	chr7	protein_coding	potassium voltage-gated channel, Isk-related subfamily, gene 3
chr7	99825990	99827194	+	99825783	99827194	A5SS	0.5	50	50	ENSMUST00000208555.2	ENSMUSG00000035165.15	Kcne3	chr7	protein_coding	potassium voltage-gated channel, Isk-related subfamily, gene 3
chr7	99827973	99830358	+	99827280	99830358	A5SS	0.5	50	50	ENSMUST00000208555.2	ENSMUSG00000035165.15	Kcne3	chr7	protein_coding	potassium voltage-gated channel, Isk-related subfamily, gene 3
chr7	99832030;99832281	99832199;99833345	+	99832030	99833345	cassetteExon	0.5	100	100	ENSMUST00000178946.9	ENSMUSG00000035165.15	Kcne3	chr7	protein_coding	potassium voltage-gated channel, Isk-related subfamily, gene 3
chr7	99827973	99830343	+	99827449	99830343	A5SS	0.5	50	50	ENSMUST00000178946.9	ENSMUSG00000035165.15	Kcne3	chr7	protein_coding	potassium voltage-gated channel, Isk-related subfamily, gene 3
chr7	99827973	99833345	+	99832030	99833345	A5SS&ES	0.33	50	50	ENSMUST00000178946.9	ENSMUSG00000035165.15	Kcne3	chr7	protein_coding	potassium voltage-gated channel, Isk-related subfamily, gene 3
chr7	99827973	99830343	+	99827973	99830358	A3SS	0.33	50	50	ENSMUST00000207358.2	ENSMUSG00000035165.15	Kcne3	chr7	protein_coding	potassium voltage-gated channel, Isk-related subfamily, gene 3
chr7	99827973	99830343	+	99827973	99833345	A3SS	0.33	50	50	ENSMUST00000207995.2	ENSMUSG00000035165.15	Kcne3	chr7	protein_coding	potassium voltage-gated channel, Isk-related subfamily, gene 3
chr7	99827973	99830358	+	99827973	99833345	A3SS	0.33	50	50	ENSMUST00000207995.2	ENSMUSG00000035165.15	Kcne3	chr7	protein_coding	potassium voltage-gated channel, Isk-related subfamily, gene 3
chr7	99832281	99833345	+	99827973	99833345	A5SS	0.33	50	50	ENSMUST00000207995.2	ENSMUSG00000035165.15	Kcne3	chr7	protein_coding	potassium voltage-gated channel, Isk-related subfamily, gene 3
chr7	99832030	99833345	+	99832281	99833345	A5SS	0.33	50	50	ENSMUST00000170954.10	ENSMUSG00000035165.15	Kcne3	chr7	protein_coding	potassium voltage-gated channel, Isk-related subfamily, gene 3
chr7	99909284	99911273	+	99909284;99910996	99910807;99911273	ES	0.5	50	50	ENSMUST00000084935.11	ENSMUSG00000030729.18	Pgm2l1	chr7	protein_coding	phosphoglucomutase 2-like 1
chr7	99962572	99966249	+	99962572;99963877	99963815;99966249	ES	0.5	50	50	ENSMUST00000057023.12	ENSMUSG00000051048.18	P4ha3	chr7	protein_coding	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide III
chr7	99934975	99941783	+	99934933	99941783	A5SS	0.5	50	50	ENSMUST00000057023.12	ENSMUSG00000051048.18	P4ha3	chr7	protein_coding	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide III
chr7	99950879	99954707	+	99949895	99954707	A5SS	0.5	50	50	ENSMUST00000057023.12	ENSMUSG00000051048.18	P4ha3	chr7	protein_coding	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide III
chr7	99997382	100003916	-	99997386	100003916	A3SS	0.5	50	50	ENSMUST00000032963.10	ENSMUSG00000030718.10	Ppme1	chr7	protein_coding	protein phosphatase methylesterase 1
chr7	100004568	100016737	-	100004568	100020930	A5SS	0.5	50	50	ENSMUST00000032963.10	ENSMUSG00000030718.10	Ppme1	chr7	protein_coding	protein phosphatase methylesterase 1
chr7	100029332;100037362	100037163;100039286	+	100029332	100039286	cassetteExon	0.5	100	100	ENSMUST00000098259.11	ENSMUSG00000047248.21	C2cd3	chr7	protein_coding	C2 calcium-dependent domain containing 3
chr7	100100996;100103579	100103498;100103810	+	100100996	100103810	cassetteExon	0.5	100	100	ENSMUST00000098259.11	ENSMUSG00000047248.21	C2cd3	chr7	protein_coding	C2 calcium-dependent domain containing 3
chr7	100023740	100029233	+	100023740	100029175	A3SS	0.5	50	50	ENSMUST00000098259.11	ENSMUSG00000047248.21	C2cd3	chr7	protein_coding	C2 calcium-dependent domain containing 3
chr7	100059657	100062537	+	100059657	100062533	A3SS	0.5	50	50	ENSMUST00000098259.11	ENSMUSG00000047248.21	C2cd3	chr7	protein_coding	C2 calcium-dependent domain containing 3
chr7	100046374	100048875	+	100045051	100048875	A5SS	0.5	50	50	ENSMUST00000098259.11	ENSMUSG00000047248.21	C2cd3	chr7	protein_coding	C2 calcium-dependent domain containing 3
chr7	100078432	100079257	+	100076503	100079257	A5SS	0.5	50	50	ENSMUST00000098259.11	ENSMUSG00000047248.21	C2cd3	chr7	protein_coding	C2 calcium-dependent domain containing 3
chr7	100113522	100118586	+	100109095	100118586	A5SS	0.33	50	50	ENSMUST00000051777.15	ENSMUSG00000047248.21	C2cd3	chr7	protein_coding	C2 calcium-dependent domain containing 3
chr7	100114764	100118586	+	100109095	100118586	A5SS	0.33	50	50	ENSMUST00000051777.15	ENSMUSG00000047248.21	C2cd3	chr7	protein_coding	C2 calcium-dependent domain containing 3
chr7	100100996	100103810	+	100100996	100103498	3pMXE	0.5	50	50	ENSMUST00000119647.9	ENSMUSG00000047248.21	C2cd3	chr7	protein_coding	C2 calcium-dependent domain containing 3
chr7	100114764	100118586	+	100113522	100118586	A5SS	0.33	50	50	ENSMUST00000151573.3	ENSMUSG00000047248.21	C2cd3	chr7	protein_coding	C2 calcium-dependent domain containing 3
chr7	100113868	100123915	-	100098088	100123915	A3SS	0.5	50	50	ENSMUST00000183512.2	ENSMUSG00000099137.2	Gm10603	chr7	lncRNA	predicted gene 10603
chr7	100113018	100113735	-	100113018	100116274	A5SS	0.5	50	50	ENSMUST00000184420.2	ENSMUSG00000099137.2	Gm10603	chr7	lncRNA	predicted gene 10603
chr7	100122301	100128641	+	100122301	100128581	A3SS	0.5	50	50	ENSMUST00000128044.8	ENSMUSG00000032942.15	Ucp3	chr7	protein_coding	uncoupling protein 3 (mitochondrial, proton carrier)
chr7	100142672	100143459	+	100142672	100143421	A3SS	0.5	50	50	ENSMUST00000126534.8	ENSMUSG00000033685.14	Ucp2	chr7	protein_coding	uncoupling protein 2 (mitochondrial, proton carrier)
chr7	100147656	100147776	+	100147656	100147943	A3SS	0.33	50	50	ENSMUST00000126534.8	ENSMUSG00000033685.14	Ucp2	chr7	protein_coding	uncoupling protein 2 (mitochondrial, proton carrier)
chr7	100147656	100147805	+	100147656	100147943	A3SS	0.33	50	50	ENSMUST00000126534.8	ENSMUSG00000033685.14	Ucp2	chr7	protein_coding	uncoupling protein 2 (mitochondrial, proton carrier)
chr7	100143217	100143421	+	100142672	100143421	A5SS	0.5	50	50	ENSMUST00000126534.8	ENSMUSG00000033685.14	Ucp2	chr7	protein_coding	uncoupling protein 2 (mitochondrial, proton carrier)
chr7	100145414	100145933	+	100143582	100145933	A5SS	0.5	50	50	ENSMUST00000126534.8	ENSMUSG00000033685.14	Ucp2	chr7	protein_coding	uncoupling protein 2 (mitochondrial, proton carrier)
chr7	100146010	100147555	+	100147479	100147555	A5SS&ES	0.5	50	50	ENSMUST00000126534.8	ENSMUSG00000033685.14	Ucp2	chr7	protein_coding	uncoupling protein 2 (mitochondrial, proton carrier)
chr7	100147656	100147805	+	100147656	100147776	A3SS	0.33	50	50	ENSMUST00000151221.8	ENSMUSG00000033685.14	Ucp2	chr7	protein_coding	uncoupling protein 2 (mitochondrial, proton carrier)
chr7	100155402	100159902	-	100155402;100156740	100156583;100159902	ES	0.5	50	50	ENSMUST00000207405.2	ENSMUSG00000030708.15	Dnajb13	chr7	protein_coding	DnaJ heat shock protein family (Hsp40) member B13
chr7	100153785	100155289	-	100153827	100155289	A3SS	0.5	50	50	ENSMUST00000207405.2	ENSMUSG00000030708.15	Dnajb13	chr7	protein_coding	DnaJ heat shock protein family (Hsp40) member B13
chr7	100161060	100162467	-	100161060	100163900	A5SS	0.5	50	50	ENSMUST00000207405.2	ENSMUSG00000030708.15	Dnajb13	chr7	protein_coding	DnaJ heat shock protein family (Hsp40) member B13
chr7	100186472	100188279	+	100186399	100188279	A5SS	0.5	50	50	ENSMUST00000054310.4	ENSMUSG00000044881.8	Coa4	chr7	protein_coding	cytochrome c oxidase assembly factor 4
chr7	100220496	100232197	-	100220496;100223721	100223669;100232197	ES	0.5	50	50	ENSMUST00000150042.8	ENSMUSG00000030706.18	Mrpl48	chr7	protein_coding	mitochondrial ribosomal protein L48
chr7	100223721	100240418	-	100223721	100232197	5pMXE	0.25	50	50	ENSMUST00000150042.8	ENSMUSG00000030706.18	Mrpl48	chr7	protein_coding	mitochondrial ribosomal protein L48
chr7	100223721	100256765	-	100223721	100232197	5pMXE	0.25	50	50	ENSMUST00000150042.8	ENSMUSG00000030706.18	Mrpl48	chr7	protein_coding	mitochondrial ribosomal protein L48
chr7	100223721	100257098	-	100223721	100232197	5pMXE	0.25	50	50	ENSMUST00000150042.8	ENSMUSG00000030706.18	Mrpl48	chr7	protein_coding	mitochondrial ribosomal protein L48
chr7	100220496;100220722	100220655;100223669	-	100220496	100223669	cassetteExon	0.5	100	100	ENSMUST00000150042.8	ENSMUSG00000030706.18	Mrpl48	chr7	protein_coding	mitochondrial ribosomal protein L48
chr7	100214634	100220459	-	100214486	100220459	A3SS	0.5	50	50	ENSMUST00000150042.8	ENSMUSG00000030706.18	Mrpl48	chr7	protein_coding	mitochondrial ribosomal protein L48
chr7	100220496	100232197	-	100220496	100223669	A5SS&ES	0.33	50	50	ENSMUST00000146003.9	ENSMUSG00000030706.18	Mrpl48	chr7	protein_coding	mitochondrial ribosomal protein L48
chr7	100223721	100240418	-	100223721	100257098	A5SS	0.25	50	50	ENSMUST00000146003.9	ENSMUSG00000030706.18	Mrpl48	chr7	protein_coding	mitochondrial ribosomal protein L48
chr7	100223721	100256765	-	100223721	100257098	A5SS	0.25	50	50	ENSMUST00000146003.9	ENSMUSG00000030706.18	Mrpl48	chr7	protein_coding	mitochondrial ribosomal protein L48
chr7	100223721	100256765	-	100223721	100240418	5pMXE	0.25	50	50	ENSMUST00000137777.8	ENSMUSG00000030706.18	Mrpl48	chr7	protein_coding	mitochondrial ribosomal protein L48
chr7	100247657	100256765	-	100223721	100256765	A3SS	0.5	50	50	ENSMUST00000138448.3	ENSMUSG00000030706.18	Mrpl48	chr7	protein_coding	mitochondrial ribosomal protein L48
chr7	100220496	100220655	-	100220496	100232197	A5SS	0.33	50	50	ENSMUST00000152876.3	ENSMUSG00000030706.18	Mrpl48	chr7	protein_coding	mitochondrial ribosomal protein L48
chr7	100277664;100279150	100279045;100280949	+	100277664;100278978	100278873;100280949	MXE	0.5	100	100	ENSMUST00000107048.8	ENSMUSG00000030704.15	Rab6a	chr7	protein_coding	RAB6A, member RAS oncogene family
chr7	100257500	100275759	+	100256727	100275759	A5SS	0.5	50	50	ENSMUST00000107048.8	ENSMUSG00000030704.15	Rab6a	chr7	protein_coding	RAB6A, member RAS oncogene family
chr7	100294876	100303809	-	100294876;100302900	100302861;100303809	ES	0.5	50	50	ENSMUST00000107046.8	ENSMUSG00000030701.18	Plekhb1	chr7	protein_coding	pleckstrin homology domain containing, family B (evectins) member 1
chr7	100294876;100299239	100299135;100302861	-	100294876	100302861	cassetteExon	0.5	100	100	ENSMUST00000107046.8	ENSMUSG00000030701.18	Plekhb1	chr7	protein_coding	pleckstrin homology domain containing, family B (evectins) member 1
chr7	100311203	100311365	-	100311199	100311365	A3SS	0.5	50	50	ENSMUST00000107047.10	ENSMUSG00000030701.18	Plekhb1	chr7	protein_coding	pleckstrin homology domain containing, family B (evectins) member 1
chr7	100306017	100306281	-	100306017	100311126	A5SS	0.25	50	50	ENSMUST00000107047.10	ENSMUSG00000030701.18	Plekhb1	chr7	protein_coding	pleckstrin homology domain containing, family B (evectins) member 1
chr7	100306017	100307500	-	100306017	100311126	A5SS	0.25	50	50	ENSMUST00000107047.10	ENSMUSG00000030701.18	Plekhb1	chr7	protein_coding	pleckstrin homology domain containing, family B (evectins) member 1
chr7	100306017	100307510	-	100306017	100311126	A5SS	0.25	50	50	ENSMUST00000107047.10	ENSMUSG00000030701.18	Plekhb1	chr7	protein_coding	pleckstrin homology domain containing, family B (evectins) member 1
chr7	100306017	100306281	-	100306017	100307500	A5SS	0.25	50	50	ENSMUST00000107044.10	ENSMUSG00000030701.18	Plekhb1	chr7	protein_coding	pleckstrin homology domain containing, family B (evectins) member 1
chr7	100306017	100307510	-	100306017	100307500	A5SS	0.25	50	50	ENSMUST00000107044.10	ENSMUSG00000030701.18	Plekhb1	chr7	protein_coding	pleckstrin homology domain containing, family B (evectins) member 1
chr7	100294876	100299135	-	100294876	100303809	A5SS	0.33	50	50	ENSMUST00000107043.8	ENSMUSG00000030701.18	Plekhb1	chr7	protein_coding	pleckstrin homology domain containing, family B (evectins) member 1
chr7	100294876	100303809	-	100294876	100302861	5pMXE	0.33	50	50	ENSMUST00000135255.2	ENSMUSG00000030701.18	Plekhb1	chr7	protein_coding	pleckstrin homology domain containing, family B (evectins) member 1
chr7	100306017	100307510	-	100306017	100306281	5pMXE	0.25	50	50	ENSMUST00000139708.9	ENSMUSG00000030701.18	Plekhb1	chr7	protein_coding	pleckstrin homology domain containing, family B (evectins) member 1
chr7	100324370	100326519	+	100324370;100325517	100325325;100326519	ES	0.5	50	50	ENSMUST00000207308.2	ENSMUSG00000108866.2	Gm35082	chr7	lncRNA	predicted gene, 35082
chr7	100462207	100473339	+	100462207;100467969	100467943;100473339	ES	0.33	50	50	ENSMUST00000107042.9	ENSMUSG00000029461.18	Fam168a	chr7	protein_coding	family with sequence similarity 168, member A
chr7	100356100;100363361	100363322;100436011	+	100356100	100436011	cassetteExon	0.5	100	100	ENSMUST00000107042.9	ENSMUSG00000029461.18	Fam168a	chr7	protein_coding	family with sequence similarity 168, member A
chr7	100467969;100472491	100472444;100473339	+	100467969	100473339	cassetteExon	0.5	100	100	ENSMUST00000107042.9	ENSMUSG00000029461.18	Fam168a	chr7	protein_coding	family with sequence similarity 168, member A
chr7	100462207	100462575	+	100462207	100467943	A3SS	0.33	50	50	ENSMUST00000107042.9	ENSMUSG00000029461.18	Fam168a	chr7	protein_coding	family with sequence similarity 168, member A
chr7	100435631	100436011	+	100356100	100436011	A5SS	0.33	50	50	ENSMUST00000107042.9	ENSMUSG00000029461.18	Fam168a	chr7	protein_coding	family with sequence similarity 168, member A
chr7	100356100	100436011	+	100356100	100363322	3pMXE	0.5	50	50	ENSMUST00000208387.2	ENSMUSG00000029461.18	Fam168a	chr7	protein_coding	family with sequence similarity 168, member A
chr7	100462207	100462575	+	100462207	100473339	A3SS	0.33	50	50	ENSMUST00000208406.2	ENSMUSG00000029461.18	Fam168a	chr7	protein_coding	family with sequence similarity 168, member A
chr7	100472491	100473339	+	100462207	100473339	A5SS	0.33	50	50	ENSMUST00000208406.2	ENSMUSG00000029461.18	Fam168a	chr7	protein_coding	family with sequence similarity 168, member A
chr7	100473464	100480535	+	100473464	100484534	A3SS	0.5	50	50	ENSMUST00000207564.2	ENSMUSG00000029461.18	Fam168a	chr7	protein_coding	family with sequence similarity 168, member A
chr7	100483390	100484534	+	100473464	100484534	A5SS	0.5	50	50	ENSMUST00000207564.2	ENSMUSG00000029461.18	Fam168a	chr7	protein_coding	family with sequence similarity 168, member A
chr7	100435631	100436011	+	100363361	100436011	A5SS	0.33	50	50	ENSMUST00000049053.9	ENSMUSG00000029461.18	Fam168a	chr7	protein_coding	family with sequence similarity 168, member A
chr7	100497480	100498006	-	100497480;100497710	100497629;100498006	ES	0.5	50	50	ENSMUST00000008462.11	ENSMUSG00000008318.11	Relt	chr7	protein_coding	RELT tumor necrosis factor receptor
chr7	100499529	100500561	-	100499529;100500379	100500300;100500561	ES	0.5	50	50	ENSMUST00000008462.11	ENSMUSG00000008318.11	Relt	chr7	protein_coding	RELT tumor necrosis factor receptor
chr7	100502322	100504582	-	100502322	100512501	A5SS	0.2	50	50	ENSMUST00000008462.11	ENSMUSG00000008318.11	Relt	chr7	protein_coding	RELT tumor necrosis factor receptor
chr7	100502322	100505424	-	100502322	100512501	A5SS	0.2	50	50	ENSMUST00000008462.11	ENSMUSG00000008318.11	Relt	chr7	protein_coding	RELT tumor necrosis factor receptor
chr7	100502322	100512213	-	100502322	100512501	A5SS	0.2	50	50	ENSMUST00000008462.11	ENSMUSG00000008318.11	Relt	chr7	protein_coding	RELT tumor necrosis factor receptor
chr7	100502322	100512319	-	100502322	100512501	A5SS	0.2	50	50	ENSMUST00000008462.11	ENSMUSG00000008318.11	Relt	chr7	protein_coding	RELT tumor necrosis factor receptor
chr7	100499529	100500561	-	100500379	100500561	3pMXE	0.5	50	50	ENSMUST00000156855.8	ENSMUSG00000008318.11	Relt	chr7	protein_coding	RELT tumor necrosis factor receptor
chr7	100502322	100505424	-	100502322	100504582	5pMXE	0.2	50	50	ENSMUST00000156855.8	ENSMUSG00000008318.11	Relt	chr7	protein_coding	RELT tumor necrosis factor receptor
chr7	100502322	100512213	-	100502322	100504582	5pMXE	0.2	50	50	ENSMUST00000156855.8	ENSMUSG00000008318.11	Relt	chr7	protein_coding	RELT tumor necrosis factor receptor
chr7	100502322	100512319	-	100502322	100504582	5pMXE	0.2	50	50	ENSMUST00000156855.8	ENSMUSG00000008318.11	Relt	chr7	protein_coding	RELT tumor necrosis factor receptor
chr7	100502322	100512213	-	100502322	100505424	5pMXE	0.2	50	50	ENSMUST00000139604.8	ENSMUSG00000008318.11	Relt	chr7	protein_coding	RELT tumor necrosis factor receptor
chr7	100502322	100512319	-	100502322	100505424	5pMXE	0.2	50	50	ENSMUST00000139604.8	ENSMUSG00000008318.11	Relt	chr7	protein_coding	RELT tumor necrosis factor receptor
chr7	100502322	100512319	-	100502322	100512213	A5SS	0.2	50	50	ENSMUST00000136231.2	ENSMUSG00000008318.11	Relt	chr7	protein_coding	RELT tumor necrosis factor receptor
chr7	100528159	100528659	-	100528261	100528659	A3SS	0.5	50	50	ENSMUST00000107032.3	ENSMUSG00000032875.9	Arhgef17	chr7	protein_coding	Rho guanine nucleotide exchange factor (GEF) 17
chr7	100539705	100543650	-	100539705	100577776	A5SS	0.5	50	50	ENSMUST00000107032.3	ENSMUSG00000032875.9	Arhgef17	chr7	protein_coding	Rho guanine nucleotide exchange factor (GEF) 17
chr7	100589225	100623722	-	100589225	100613426	5pMXE	0.5	50	50	ENSMUST00000060174.6	ENSMUSG00000048779.6	P2ry6	chr7	protein_coding	pyrimidinergic receptor P2Y, G-protein coupled, 6
chr7	100648307	100660919	-	100648307;100652961	100652771;100660919	ES	0.5	50	50	ENSMUST00000037540.5	ENSMUSG00000032860.6	P2ry2	chr7	protein_coding	purinergic receptor P2Y, G-protein coupled 2
chr7	100652961	100661137	-	100652961	100660919	A5SS	0.5	50	50	ENSMUST00000037540.5	ENSMUSG00000032860.6	P2ry2	chr7	protein_coding	purinergic receptor P2Y, G-protein coupled 2
chr7	100648307	100660919	-	100648307	100652771	5pMXE	0.33	50	50	ENSMUST00000208340.2	ENSMUSG00000032860.6	P2ry2	chr7	protein_coding	purinergic receptor P2Y, G-protein coupled 2
chr7	100648307	100661615	-	100648307	100652771	5pMXE	0.33	50	50	ENSMUST00000208340.2	ENSMUSG00000032860.6	P2ry2	chr7	protein_coding	purinergic receptor P2Y, G-protein coupled 2
chr7	100648307	100661615	-	100648307	100660919	5pMXE	0.33	50	50	ENSMUST00000178340.3	ENSMUSG00000032860.6	P2ry2	chr7	protein_coding	purinergic receptor P2Y, G-protein coupled 2
chr7	100826427	100840874	+	100826427;100835739	100835595;100840874	ES	0.5	50	50	ENSMUST00000208439.2	ENSMUSG00000030691.16	Fchsd2	chr7	protein_coding	FCH and double SH3 domains 2
chr7	100758246	100759946	+	100742133	100759946	A5SS	0.5	50	50	ENSMUST00000208439.2	ENSMUSG00000030691.16	Fchsd2	chr7	protein_coding	FCH and double SH3 domains 2
chr7	100759979	100826351	+	100788403	100826351	A5SS&ES	0.5	50	50	ENSMUST00000208439.2	ENSMUSG00000030691.16	Fchsd2	chr7	protein_coding	FCH and double SH3 domains 2
chr7	100893423	100899652	+	100893423;100895580	100895509;100899652	ES	0.5	50	50	ENSMUST00000032931.9	ENSMUSG00000030691.16	Fchsd2	chr7	protein_coding	FCH and double SH3 domains 2
chr7	100847816	100852928	+	100847816	100883079	A3SS	0.5	50	50	ENSMUST00000032931.9	ENSMUSG00000030691.16	Fchsd2	chr7	protein_coding	FCH and double SH3 domains 2
chr7	100939141	100939377	-	100921014	100939377	A3SS	0.5	50	50	ENSMUST00000207740.2	ENSMUSG00000047767.18	Atg16l2	chr7	protein_coding	autophagy related 16-like 2 (S. cerevisiae)
chr7	100943191	100945328	-	100943191;100944128	100944066;100945328	ES	0.5	50	50	ENSMUST00000120267.9	ENSMUSG00000047767.18	Atg16l2	chr7	protein_coding	autophagy related 16-like 2 (S. cerevisiae)
chr7	100945441	100945964	-	100945441;100945780	100945715;100945964	ES	0.5	50	50	ENSMUST00000120267.9	ENSMUSG00000047767.18	Atg16l2	chr7	protein_coding	autophagy related 16-like 2 (S. cerevisiae)
chr7	100946440	100949319	-	100946440;100948315	100948213;100949319	ES	0.5	50	50	ENSMUST00000120267.9	ENSMUSG00000047767.18	Atg16l2	chr7	protein_coding	autophagy related 16-like 2 (S. cerevisiae)
chr7	100940799	100940922	-	100940799	100941086	A5SS	0.5	50	50	ENSMUST00000120267.9	ENSMUSG00000047767.18	Atg16l2	chr7	protein_coding	autophagy related 16-like 2 (S. cerevisiae)
chr7	100949418	100951104	-	100949418	100951108	A5SS	0.5	50	50	ENSMUST00000120267.9	ENSMUSG00000047767.18	Atg16l2	chr7	protein_coding	autophagy related 16-like 2 (S. cerevisiae)
chr7	100945441	100945964	-	100945441	100945715	5pMXE	0.5	50	50	ENSMUST00000146445.2	ENSMUSG00000047767.18	Atg16l2	chr7	protein_coding	autophagy related 16-like 2 (S. cerevisiae)
chr7	100946440	100949319	-	100948315	100949319	3pMXE	0.5	50	50	ENSMUST00000207121.2	ENSMUSG00000047767.18	Atg16l2	chr7	protein_coding	autophagy related 16-like 2 (S. cerevisiae)
chr7	100992494	100994842	+	100992494;100993241	100993124;100994842	ES	0.5	50	50	ENSMUST00000163799.9	ENSMUSG00000030688.16	Stard10	chr7	protein_coding	START domain containing 10
chr7	100993241	100995099	+	100993241;100994894	100994842;100995099	ES	0.5	50	50	ENSMUST00000163799.9	ENSMUSG00000030688.16	Stard10	chr7	protein_coding	START domain containing 10
chr7	100970757	100970921	+	100970559	100970921	A5SS	0.5	50	50	ENSMUST00000163799.9	ENSMUSG00000030688.16	Stard10	chr7	protein_coding	START domain containing 10
chr7	100971102	100991705	+	100971240	100991705	A5SS	0.5	50	50	ENSMUST00000163799.9	ENSMUSG00000030688.16	Stard10	chr7	protein_coding	START domain containing 10
chr7	100991836	100992391	+	100991852	100992391	A5SS	0.5	50	50	ENSMUST00000163799.9	ENSMUSG00000030688.16	Stard10	chr7	protein_coding	START domain containing 10
chr7	100992494;100994894	100994842;100995099	+	100992494;100993241	100993124;100995099	MXE	0.5	100	100	ENSMUST00000167888.9	ENSMUSG00000030688.16	Stard10	chr7	protein_coding	START domain containing 10
chr7	100992494	100994842	+	100992494	100993124	3pMXE	0.5	50	50	ENSMUST00000174083.2	ENSMUSG00000030688.16	Stard10	chr7	protein_coding	START domain containing 10
chr7	101047638	101048686	+	101047638;101048005	101047903;101048686	ES	0.5	50	50	ENSMUST00000107010.9	ENSMUSG00000032812.19	Arap1	chr7	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr7	101060276	101100609	+	101060276	101060511	3pMXE	0.5	50	50	ENSMUST00000107010.9	ENSMUSG00000032812.19	Arap1	chr7	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr7	101053632;101054172	101054140;101057254	+	101053632	101057254	cassetteExon	0.5	100	100	ENSMUST00000107010.9	ENSMUSG00000032812.19	Arap1	chr7	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr7	101035480	101035641	+	101035480	101035599	A3SS	0.5	50	50	ENSMUST00000107010.9	ENSMUSG00000032812.19	Arap1	chr7	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr7	101042836	101043133	+	101042836	101043941	A3SS	0.5	50	50	ENSMUST00000107010.9	ENSMUSG00000032812.19	Arap1	chr7	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr7	101010546	101016228	+	100997406	101016228	A5SS	0.33	50	50	ENSMUST00000107010.9	ENSMUSG00000032812.19	Arap1	chr7	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr7	101011443	101016228	+	100997406	101016228	A5SS	0.33	50	50	ENSMUST00000107010.9	ENSMUSG00000032812.19	Arap1	chr7	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr7	101027739	101034069	+	101022708	101034069	A5SS	0.2	50	50	ENSMUST00000107010.9	ENSMUSG00000032812.19	Arap1	chr7	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr7	101027739	101034759	+	101034247	101034759	A5SS&ES	0.33	50	50	ENSMUST00000107010.9	ENSMUSG00000032812.19	Arap1	chr7	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr7	101032163	101034069	+	101022708	101034069	A5SS	0.2	50	50	ENSMUST00000107010.9	ENSMUSG00000032812.19	Arap1	chr7	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr7	101032191	101034069	+	101022708	101034069	A5SS	0.2	50	50	ENSMUST00000107010.9	ENSMUSG00000032812.19	Arap1	chr7	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr7	101033313	101034069	+	101022708	101034069	A5SS	0.2	50	50	ENSMUST00000107010.9	ENSMUSG00000032812.19	Arap1	chr7	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr7	101034631	101034759	+	101034247	101034759	A5SS	0.33	50	50	ENSMUST00000107010.9	ENSMUSG00000032812.19	Arap1	chr7	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr7	101043674	101043941	+	101042836	101043941	A5SS	0.5	50	50	ENSMUST00000107010.9	ENSMUSG00000032812.19	Arap1	chr7	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr7	101045185	101045268	+	101044115	101045268	A5SS	0.5	50	50	ENSMUST00000107010.9	ENSMUSG00000032812.19	Arap1	chr7	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr7	101011443	101016228	+	101010546	101016228	A5SS	0.33	50	50	ENSMUST00000137384.8	ENSMUSG00000032812.19	Arap1	chr7	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr7	101027739;101034247	101034069;101034759	+	101027739	101034759	cassetteExon	0.5	100	100	ENSMUST00000084895.12	ENSMUSG00000032812.19	Arap1	chr7	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr7	101034631	101034759	+	101027739	101034759	A5SS	0.33	50	50	ENSMUST00000084895.12	ENSMUSG00000032812.19	Arap1	chr7	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr7	101032163	101034069	+	101027739	101034069	A5SS	0.2	50	50	ENSMUST00000127873.8	ENSMUSG00000032812.19	Arap1	chr7	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr7	101032191	101034069	+	101027739	101034069	A5SS	0.2	50	50	ENSMUST00000127873.8	ENSMUSG00000032812.19	Arap1	chr7	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr7	101033313	101034069	+	101027739	101034069	A5SS	0.2	50	50	ENSMUST00000127873.8	ENSMUSG00000032812.19	Arap1	chr7	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr7	101032191	101034069	+	101032163	101034069	A5SS	0.2	50	50	ENSMUST00000152082.8	ENSMUSG00000032812.19	Arap1	chr7	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr7	101033313	101034069	+	101032163	101034069	A5SS	0.2	50	50	ENSMUST00000152082.8	ENSMUSG00000032812.19	Arap1	chr7	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr7	101033313	101034069	+	101032191	101034069	A5SS	0.2	50	50	ENSMUST00000141083.9	ENSMUSG00000032812.19	Arap1	chr7	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr7	101100675	101130578	+	101100675;101110748	101110687;101130578	ES	0.33	50	50	ENSMUST00000084894.15	ENSMUSG00000030653.18	Gm45837	chr7	protein_coding	predicted gene 45837
chr7	101152149	101152494	+	101152149	101152506	A3SS	0.5	50	50	ENSMUST00000084894.15	ENSMUSG00000030653.18	Gm45837	chr7	protein_coding	predicted gene 45837
chr7	101071202	101100609	+	101060276	101100609	A5SS	0.33	50	50	ENSMUST00000084894.15	ENSMUSG00000030653.18	Gm45837	chr7	protein_coding	predicted gene 45837
chr7	101099935	101100609	+	101060276	101100609	A5SS	0.33	50	50	ENSMUST00000084894.15	ENSMUSG00000030653.18	Gm45837	chr7	protein_coding	predicted gene 45837
chr7	101101640	101130578	+	101110748	101130578	A5SS&ES	0.33	50	50	ENSMUST00000084894.15	ENSMUSG00000030653.18	Gm45837	chr7	protein_coding	predicted gene 45837
chr7	101105426	101110687	+	101100675	101110687	A5SS	0.33	50	50	ENSMUST00000084894.15	ENSMUSG00000030653.18	Gm45837	chr7	protein_coding	predicted gene 45837
chr7	101110374	101110687	+	101100675	101110687	A5SS	0.33	50	50	ENSMUST00000084894.15	ENSMUSG00000030653.18	Gm45837	chr7	protein_coding	predicted gene 45837
chr7	101099935	101100609	+	101071202	101100609	A5SS	0.33	50	50	ENSMUST00000163751.10	ENSMUSG00000110195.2	Pde2a	chr7	protein_coding	phosphodiesterase 2A, cGMP-stimulated
chr7	101101640	101130578	+	101100675	101130578	A5SS	0.33	50	50	ENSMUST00000163751.10	ENSMUSG00000110195.2	Pde2a	chr7	protein_coding	phosphodiesterase 2A, cGMP-stimulated
chr7	101110374	101110687	+	101105426	101110687	A5SS	0.33	50	50	ENSMUST00000210100.2	ENSMUSG00000110195.2	Pde2a	chr7	protein_coding	phosphodiesterase 2A, cGMP-stimulated
chr7	101228149	101229111	-	101228149	101229120	A5SS	0.5	50	50	ENSMUST00000209526.2	ENSMUSG00000030651.6	Art2b	chr7	protein_coding	ADP-ribosyltransferase 2b
chr7	101355793	101371912	+	101355793;101371279	101371152;101371912	ES	0.33	50	50	ENSMUST00000137214.8	ENSMUSG00000001829.18	Clpb	chr7	protein_coding	ClpB caseinolytic peptidase B
chr7	101313420;101315457	101315369;101316455	+	101313420	101316455	cassetteExon	0.5	100	100	ENSMUST00000137214.8	ENSMUSG00000001829.18	Clpb	chr7	protein_coding	ClpB caseinolytic peptidase B
chr7	101355793;101360707	101360618;101371912	+	101355793;101371279	101371152;101371912	MXE	0.5	100	100	ENSMUST00000137214.8	ENSMUSG00000001829.18	Clpb	chr7	protein_coding	ClpB caseinolytic peptidase B
chr7	101331419	101336495	+	101316506	101336495	A5SS	0.33	50	50	ENSMUST00000137214.8	ENSMUSG00000001829.18	Clpb	chr7	protein_coding	ClpB caseinolytic peptidase B
chr7	101332446	101336495	+	101316506	101336495	A5SS	0.33	50	50	ENSMUST00000137214.8	ENSMUSG00000001829.18	Clpb	chr7	protein_coding	ClpB caseinolytic peptidase B
chr7	101355793;101360707	101360618;101371912	+	101355793	101371912	cassetteExon	0.5	100	100	ENSMUST00000001884.14	ENSMUSG00000001829.18	Clpb	chr7	protein_coding	ClpB caseinolytic peptidase B
chr7	101412902	101418009	+	101412902	101422287	A3SS	0.5	50	50	ENSMUST00000001884.14	ENSMUSG00000001829.18	Clpb	chr7	protein_coding	ClpB caseinolytic peptidase B
chr7	101332446	101336495	+	101331419	101336495	A5SS	0.33	50	50	ENSMUST00000147439.8	ENSMUSG00000001829.18	Clpb	chr7	protein_coding	ClpB caseinolytic peptidase B
chr7	101472610	101473100	-	101472610;101472853	101472720;101473100	ES	0.5	50	50	ENSMUST00000035836.14	ENSMUSG00000032737.14	Inppl1	chr7	protein_coding	inositol polyphosphate phosphatase-like 1
chr7	101478903	101479260	-	101478879	101479260	A3SS	0.5	50	50	ENSMUST00000035836.14	ENSMUSG00000032737.14	Inppl1	chr7	protein_coding	inositol polyphosphate phosphatase-like 1
chr7	101483045	101485825	-	101483045	101485778	A5SS	0.5	50	50	ENSMUST00000035836.14	ENSMUSG00000032737.14	Inppl1	chr7	protein_coding	inositol polyphosphate phosphatase-like 1
chr7	101486158	101486872	-	101486158	101487096	A5SS	0.33	50	50	ENSMUST00000035836.14	ENSMUSG00000032737.14	Inppl1	chr7	protein_coding	inositol polyphosphate phosphatase-like 1
chr7	101486158	101486928	-	101486158	101487096	A5SS	0.33	50	50	ENSMUST00000035836.14	ENSMUSG00000032737.14	Inppl1	chr7	protein_coding	inositol polyphosphate phosphatase-like 1
chr7	101486158	101486872	-	101486158	101486928	A5SS	0.33	50	50	ENSMUST00000165052.8	ENSMUSG00000032737.14	Inppl1	chr7	protein_coding	inositol polyphosphate phosphatase-like 1
chr7	101487378	101488009	+	101486624	101488009	A5SS	0.5	50	50	ENSMUST00000211428.2	ENSMUSG00000073985.3	Gm10602	chr7	lncRNA	predicted gene 10602
chr7	101493031	101506052	-	101493031	101494411	5pMXE	0.5	50	50	ENSMUST00000094141.7	ENSMUSG00000032725.11	Folr2	chr7	protein_coding	folate receptor 2 (fetal)
chr7	101490204;101492625	101492593;101492875	-	101490204	101492875	cassetteExon	0.5	100	100	ENSMUST00000094141.7	ENSMUSG00000032725.11	Folr2	chr7	protein_coding	folate receptor 2 (fetal)
chr7	101493027	101494411	-	101493031	101494411	A3SS	0.5	50	50	ENSMUST00000094141.7	ENSMUSG00000032725.11	Folr2	chr7	protein_coding	folate receptor 2 (fetal)
chr7	101513301	101517605	-	101513301	101516485	5pMXE	0.33	50	50	ENSMUST00000106982.8	ENSMUSG00000001827.13	Folr1	chr7	protein_coding	folate receptor 1 (adult)
chr7	101513301	101518364	-	101513301	101516485	5pMXE	0.33	50	50	ENSMUST00000106982.8	ENSMUSG00000001827.13	Folr1	chr7	protein_coding	folate receptor 1 (adult)
chr7	101513301	101518364	-	101513301;101517758	101517605;101518364	ES	0.2	50	50	ENSMUST00000106986.9	ENSMUSG00000001827.13	Folr1	chr7	protein_coding	folate receptor 1 (adult)
chr7	101513313	101517605	-	101513301	101517605	A3SS	0.5	50	50	ENSMUST00000106986.9	ENSMUSG00000001827.13	Folr1	chr7	protein_coding	folate receptor 1 (adult)
chr7	101517674	101518364	-	101517758	101518364	A3SS	0.2	50	50	ENSMUST00000106986.9	ENSMUSG00000001827.13	Folr1	chr7	protein_coding	folate receptor 1 (adult)
chr7	101517677	101518364	-	101517758	101518364	A3SS	0.2	50	50	ENSMUST00000106986.9	ENSMUSG00000001827.13	Folr1	chr7	protein_coding	folate receptor 1 (adult)
chr7	101517761	101518364	-	101517758	101518364	A3SS	0.2	50	50	ENSMUST00000106986.9	ENSMUSG00000001827.13	Folr1	chr7	protein_coding	folate receptor 1 (adult)
chr7	101518524	101519816	-	101518511	101519816	A3SS	0.5	50	50	ENSMUST00000106986.9	ENSMUSG00000001827.13	Folr1	chr7	protein_coding	folate receptor 1 (adult)
chr7	101517758	101518200	-	101517758	101518364	A5SS	0.5	50	50	ENSMUST00000106986.9	ENSMUSG00000001827.13	Folr1	chr7	protein_coding	folate receptor 1 (adult)
chr7	101518511	101519245	-	101518511	101519816	A5SS	0.33	50	50	ENSMUST00000106986.9	ENSMUSG00000001827.13	Folr1	chr7	protein_coding	folate receptor 1 (adult)
chr7	101518511	101519522	-	101518511	101519816	A5SS	0.33	50	50	ENSMUST00000106986.9	ENSMUSG00000001827.13	Folr1	chr7	protein_coding	folate receptor 1 (adult)
chr7	101513301	101518364	-	101513301;101517761	101517605;101518364	ES	0.2	50	50	ENSMUST00000106985.8	ENSMUSG00000001827.13	Folr1	chr7	protein_coding	folate receptor 1 (adult)
chr7	101517674	101518364	-	101517761	101518364	A3SS	0.2	50	50	ENSMUST00000106985.8	ENSMUSG00000001827.13	Folr1	chr7	protein_coding	folate receptor 1 (adult)
chr7	101517677	101518364	-	101517761	101518364	A3SS	0.2	50	50	ENSMUST00000106985.8	ENSMUSG00000001827.13	Folr1	chr7	protein_coding	folate receptor 1 (adult)
chr7	101513301	101518364	-	101513301;101517674	101517605;101518364	ES	0.2	50	50	ENSMUST00000106983.8	ENSMUSG00000001827.13	Folr1	chr7	protein_coding	folate receptor 1 (adult)
chr7	101517677	101518364	-	101517674	101518364	A3SS	0.2	50	50	ENSMUST00000106983.8	ENSMUSG00000001827.13	Folr1	chr7	protein_coding	folate receptor 1 (adult)
chr7	101513301;101517677	101517605;101518364	-	101513301	101518364	cassetteExon	0.5	100	100	ENSMUST00000140068.8	ENSMUSG00000001827.13	Folr1	chr7	protein_coding	folate receptor 1 (adult)
chr7	101513301	101518364	-	101517674	101518364	A3SS&ES	0.2	50	50	ENSMUST00000151706.8	ENSMUSG00000001827.13	Folr1	chr7	protein_coding	folate receptor 1 (adult)
chr7	101513301	101518364	-	101513301	101517605	5pMXE	0.33	50	50	ENSMUST00000150184.2	ENSMUSG00000001827.13	Folr1	chr7	protein_coding	folate receptor 1 (adult)
chr7	101513301	101518364	-	101517758	101518364	A3SS&ES	0.2	50	50	ENSMUST00000124026.8	ENSMUSG00000001827.13	Folr1	chr7	protein_coding	folate receptor 1 (adult)
chr7	101518511	101519245	-	101518511	101519522	A5SS	0.33	50	50	ENSMUST00000124026.8	ENSMUSG00000001827.13	Folr1	chr7	protein_coding	folate receptor 1 (adult)
chr7	101547024	101547154	+	101547024	101547149	A3SS	0.5	50	50	ENSMUST00000209334.2	ENSMUSG00000030649.19	Anapc15	chr7	protein_coding	anaphase promoting complex C subunit 15
chr7	101528508	101546940	+	101513036	101546940	A5SS	0.16	50	50	ENSMUST00000209334.2	ENSMUSG00000030649.19	Anapc15	chr7	protein_coding	anaphase promoting complex C subunit 15
chr7	101530609	101546940	+	101513036	101546940	A5SS	0.16	50	50	ENSMUST00000209334.2	ENSMUSG00000030649.19	Anapc15	chr7	protein_coding	anaphase promoting complex C subunit 15
chr7	101545457	101546940	+	101513036	101546940	A5SS	0.16	50	50	ENSMUST00000209334.2	ENSMUSG00000030649.19	Anapc15	chr7	protein_coding	anaphase promoting complex C subunit 15
chr7	101545657	101546940	+	101513036	101546940	A5SS	0.16	50	50	ENSMUST00000209334.2	ENSMUSG00000030649.19	Anapc15	chr7	protein_coding	anaphase promoting complex C subunit 15
chr7	101545657	101547149	+	101547024	101547149	A5SS&ES	0.5	50	50	ENSMUST00000209334.2	ENSMUSG00000030649.19	Anapc15	chr7	protein_coding	anaphase promoting complex C subunit 15
chr7	101546567	101546940	+	101513036	101546940	A5SS	0.16	50	50	ENSMUST00000209334.2	ENSMUSG00000030649.19	Anapc15	chr7	protein_coding	anaphase promoting complex C subunit 15
chr7	101521943	101528424	+	101521943	101522314	3pMXE	0.5	50	50	ENSMUST00000211100.2	ENSMUSG00000030649.19	Anapc15	chr7	protein_coding	anaphase promoting complex C subunit 15
chr7	101530609	101546940	+	101528508	101546940	A5SS	0.2	50	50	ENSMUST00000210984.2	ENSMUSG00000030649.19	Anapc15	chr7	protein_coding	anaphase promoting complex C subunit 15
chr7	101545457	101546940	+	101528508	101546940	A5SS	0.2	50	50	ENSMUST00000210984.2	ENSMUSG00000030649.19	Anapc15	chr7	protein_coding	anaphase promoting complex C subunit 15
chr7	101545657	101546940	+	101528508	101546940	A5SS	0.2	50	50	ENSMUST00000210984.2	ENSMUSG00000030649.19	Anapc15	chr7	protein_coding	anaphase promoting complex C subunit 15
chr7	101546567	101546940	+	101528508	101546940	A5SS	0.2	50	50	ENSMUST00000210984.2	ENSMUSG00000030649.19	Anapc15	chr7	protein_coding	anaphase promoting complex C subunit 15
chr7	101548244	101550139	+	101548244	101548401	3pMXE	0.5	50	50	ENSMUST00000106978.8	ENSMUSG00000030649.19	Anapc15	chr7	protein_coding	anaphase promoting complex C subunit 15
chr7	101545457	101546940	+	101530609	101546940	A5SS	0.16	50	50	ENSMUST00000106978.8	ENSMUSG00000030649.19	Anapc15	chr7	protein_coding	anaphase promoting complex C subunit 15
chr7	101545657	101546940	+	101530609	101546940	A5SS	0.16	50	50	ENSMUST00000106978.8	ENSMUSG00000030649.19	Anapc15	chr7	protein_coding	anaphase promoting complex C subunit 15
chr7	101546567	101546940	+	101530609	101546940	A5SS	0.16	50	50	ENSMUST00000106978.8	ENSMUSG00000030649.19	Anapc15	chr7	protein_coding	anaphase promoting complex C subunit 15
chr7	101548235	101548401	+	101548244	101548401	A5SS	0.5	50	50	ENSMUST00000106978.8	ENSMUSG00000030649.19	Anapc15	chr7	protein_coding	anaphase promoting complex C subunit 15
chr7	101545657	101546940	+	101545457	101546940	A5SS	0.16	50	50	ENSMUST00000131269.8	ENSMUSG00000030649.19	Anapc15	chr7	protein_coding	anaphase promoting complex C subunit 15
chr7	101546567	101546940	+	101545457	101546940	A5SS	0.16	50	50	ENSMUST00000131269.8	ENSMUSG00000030649.19	Anapc15	chr7	protein_coding	anaphase promoting complex C subunit 15
chr7	101546994	101547154	+	101547024	101547154	A5SS	0.5	50	50	ENSMUST00000131269.8	ENSMUSG00000030649.19	Anapc15	chr7	protein_coding	anaphase promoting complex C subunit 15
chr7	101545657	101547149	+	101545657	101546940	A3SS&ES	0.5	50	50	ENSMUST00000035395.14	ENSMUSG00000030649.19	Anapc15	chr7	protein_coding	anaphase promoting complex C subunit 15
chr7	101546567	101546940	+	101545657	101546940	A5SS	0.16	50	50	ENSMUST00000035395.14	ENSMUSG00000030649.19	Anapc15	chr7	protein_coding	anaphase promoting complex C subunit 15
chr7	101545657;101547024	101546940;101547149	+	101545657	101547149	cassetteExon	0.5	100	100	ENSMUST00000106973.8	ENSMUSG00000030649.19	Anapc15	chr7	protein_coding	anaphase promoting complex C subunit 15
chr7	101551494	101555506	-	101551494	101552923	5pMXE	0.5	50	50	ENSMUST00000106969.9	ENSMUSG00000078630.9	Tomt	chr7	protein_coding	transmembrane O-methyltransferase
chr7	101559753	101575636	+	101559753	101560480	3pMXE	0.5	50	50	ENSMUST00000033131.12	ENSMUSG00000030842.13	Lamtor1	chr7	protein_coding	late endosomal/lysosomal adaptor, MAPK and MTOR activator 1
chr7	101569981	101570711	-	101569981	101570376	5pMXE	0.25	50	50	ENSMUST00000106968.8	ENSMUSG00000064307.14	Lrrc51	chr7	protein_coding	leucine rich repeat containing 51
chr7	101569981	101582957	-	101569981	101570376	5pMXE	0.25	50	50	ENSMUST00000106968.8	ENSMUSG00000064307.14	Lrrc51	chr7	protein_coding	leucine rich repeat containing 51
chr7	101569981	101582971	-	101569981	101570376	5pMXE	0.25	50	50	ENSMUST00000106968.8	ENSMUSG00000064307.14	Lrrc51	chr7	protein_coding	leucine rich repeat containing 51
chr7	101562415	101562642	-	101562419	101562642	A3SS	0.5	50	50	ENSMUST00000106968.8	ENSMUSG00000064307.14	Lrrc51	chr7	protein_coding	leucine rich repeat containing 51
chr7	101564974	101582971	-	101564974	101569844	5pMXE	0.5	50	50	ENSMUST00000163903.8	ENSMUSG00000064307.14	Lrrc51	chr7	protein_coding	leucine rich repeat containing 51
chr7	101569981	101582971	-	101569981;101570773	101570711;101582971	ES	0.33	50	50	ENSMUST00000078448.11	ENSMUSG00000064307.14	Lrrc51	chr7	protein_coding	leucine rich repeat containing 51
chr7	101569981	101582957	-	101569981	101570711	A5SS&ES	0.25	50	50	ENSMUST00000078448.11	ENSMUSG00000064307.14	Lrrc51	chr7	protein_coding	leucine rich repeat containing 51
chr7	101564974	101582971	-	101564974;101569981	101569844;101582971	ES	0.33	50	50	ENSMUST00000106966.8	ENSMUSG00000064307.14	Lrrc51	chr7	protein_coding	leucine rich repeat containing 51
chr7	101569981;101570773	101570376;101582971	-	101569981	101582971	cassetteExon	0.5	100	100	ENSMUST00000106966.8	ENSMUSG00000064307.14	Lrrc51	chr7	protein_coding	leucine rich repeat containing 51
chr7	101569981	101582957	-	101569981	101582971	A5SS	0.25	50	50	ENSMUST00000106966.8	ENSMUSG00000064307.14	Lrrc51	chr7	protein_coding	leucine rich repeat containing 51
chr7	101570773	101582971	-	101564974	101582971	A3SS	0.33	50	50	ENSMUST00000130155.2	ENSMUSG00000064307.14	Lrrc51	chr7	protein_coding	leucine rich repeat containing 51
chr7	101640935	101642432	+	101640935;101641925	101641845;101642432	ES	0.5	50	50	ENSMUST00000209639.2	ENSMUSG00000066306.14	Numa1	chr7	protein_coding	nuclear mitotic apparatus protein 1
chr7	101583382	101626587	+	101583524	101626587	A5SS	0.2	50	50	ENSMUST00000209639.2	ENSMUSG00000066306.14	Numa1	chr7	protein_coding	nuclear mitotic apparatus protein 1
chr7	101619176	101626587	+	101583524	101626587	A5SS	0.2	50	50	ENSMUST00000209639.2	ENSMUSG00000066306.14	Numa1	chr7	protein_coding	nuclear mitotic apparatus protein 1
chr7	101619561	101626587	+	101583524	101626587	A5SS	0.2	50	50	ENSMUST00000209639.2	ENSMUSG00000066306.14	Numa1	chr7	protein_coding	nuclear mitotic apparatus protein 1
chr7	101620034	101626587	+	101583524	101626587	A5SS	0.2	50	50	ENSMUST00000209639.2	ENSMUSG00000066306.14	Numa1	chr7	protein_coding	nuclear mitotic apparatus protein 1
chr7	101619176	101626587	+	101583382	101626587	A5SS	0.2	50	50	ENSMUST00000210679.2	ENSMUSG00000066306.14	Numa1	chr7	protein_coding	nuclear mitotic apparatus protein 1
chr7	101619561	101626587	+	101583382	101626587	A5SS	0.2	50	50	ENSMUST00000210679.2	ENSMUSG00000066306.14	Numa1	chr7	protein_coding	nuclear mitotic apparatus protein 1
chr7	101620034	101626587	+	101583382	101626587	A5SS	0.2	50	50	ENSMUST00000210679.2	ENSMUSG00000066306.14	Numa1	chr7	protein_coding	nuclear mitotic apparatus protein 1
chr7	101650866;101651543	101651502;101656693	+	101650866	101656693	cassetteExon	0.5	100	100	ENSMUST00000084852.13	ENSMUSG00000066306.14	Numa1	chr7	protein_coding	nuclear mitotic apparatus protein 1
chr7	101619561	101626587	+	101619176	101626587	A5SS	0.2	50	50	ENSMUST00000084852.13	ENSMUSG00000066306.14	Numa1	chr7	protein_coding	nuclear mitotic apparatus protein 1
chr7	101620034	101626587	+	101619176	101626587	A5SS	0.2	50	50	ENSMUST00000084852.13	ENSMUSG00000066306.14	Numa1	chr7	protein_coding	nuclear mitotic apparatus protein 1
chr7	101620034	101626587	+	101619561	101626587	A5SS	0.2	50	50	ENSMUST00000210475.2	ENSMUSG00000066306.14	Numa1	chr7	protein_coding	nuclear mitotic apparatus protein 1
chr7	101666558	101667317	-	101666558;101666871	101666804;101667317	ES	0.33	50	50	ENSMUST00000209844.2	ENSMUSG00000070427.5	Il18bp	chr7	protein_coding	interleukin 18 binding protein
chr7	101666844	101667317	-	101666871	101667317	A3SS	0.33	50	50	ENSMUST00000209844.2	ENSMUSG00000070427.5	Il18bp	chr7	protein_coding	interleukin 18 binding protein
chr7	101666558	101667317	-	101666558;101666844	101666804;101667317	ES	0.33	50	50	ENSMUST00000094134.5	ENSMUSG00000070427.5	Il18bp	chr7	protein_coding	interleukin 18 binding protein
chr7	101678339	101684514	-	101678339;101680808	101680701;101684514	ES	0.5	50	50	ENSMUST00000096639.12	ENSMUSG00000070426.13	Rnf121	chr7	protein_coding	ring finger protein 121
chr7	101691871	101714474	-	101691871	101714273	5pMXE	0.25	50	50	ENSMUST00000096639.12	ENSMUSG00000070426.13	Rnf121	chr7	protein_coding	ring finger protein 121
chr7	101684622	101688757	-	101684668	101688757	A3SS	0.5	50	50	ENSMUST00000096639.12	ENSMUSG00000070426.13	Rnf121	chr7	protein_coding	ring finger protein 121
chr7	101691871	101708300	-	101691871	101714273	A5SS	0.25	50	50	ENSMUST00000096639.12	ENSMUSG00000070426.13	Rnf121	chr7	protein_coding	ring finger protein 121
chr7	101691871	101713984	-	101691871	101714273	A5SS	0.25	50	50	ENSMUST00000096639.12	ENSMUSG00000070426.13	Rnf121	chr7	protein_coding	ring finger protein 121
chr7	101691871	101708300	-	101691871	101714474	A5SS	0.25	50	50	ENSMUST00000089052.11	ENSMUSG00000070426.13	Rnf121	chr7	protein_coding	ring finger protein 121
chr7	101691871	101713984	-	101691871	101714474	A5SS	0.25	50	50	ENSMUST00000089052.11	ENSMUSG00000070426.13	Rnf121	chr7	protein_coding	ring finger protein 121
chr7	101691871	101713984	-	101691871	101708300	5pMXE	0.25	50	50	ENSMUST00000106953.8	ENSMUSG00000070426.13	Rnf121	chr7	protein_coding	ring finger protein 121
chr7	101715011;101719198	101719104;101720394	+	101715011	101720394	cassetteExon	0.5	100	100	ENSMUST00000106950.8	ENSMUSG00000099481.7	Xndc1	chr7	protein_coding	Xrcc1 N-terminal domain containing 1
chr7	101715011	101715667	+	101715011	101720394	A3SS	0.25	50	50	ENSMUST00000106950.8	ENSMUSG00000099481.7	Xndc1	chr7	protein_coding	Xrcc1 N-terminal domain containing 1
chr7	101715011	101720426	+	101715011	101720394	A3SS	0.25	50	50	ENSMUST00000106950.8	ENSMUSG00000099481.7	Xndc1	chr7	protein_coding	Xrcc1 N-terminal domain containing 1
chr7	101715149	101720394	+	101715011	101720394	A5SS	0.33	50	50	ENSMUST00000106950.8	ENSMUSG00000099481.7	Xndc1	chr7	protein_coding	Xrcc1 N-terminal domain containing 1
chr7	101728104	101728212	+	101728025	101728212	A5SS	0.5	50	50	ENSMUST00000106950.8	ENSMUSG00000099481.7	Xndc1	chr7	protein_coding	Xrcc1 N-terminal domain containing 1
chr7	101730309	101730690	+	101729811	101730690	A5SS	0.5	50	50	ENSMUST00000106950.8	ENSMUSG00000099481.7	Xndc1	chr7	protein_coding	Xrcc1 N-terminal domain containing 1
chr7	101715011	101720426	+	101715011;101719198	101719104;101720426	ES	0.5	50	50	ENSMUST00000153176.8	ENSMUSG00000099481.7	Xndc1	chr7	protein_coding	Xrcc1 N-terminal domain containing 1
chr7	101715011;101715836	101715667;101719104	+	101715011	101719104	cassetteExon	0.5	100	100	ENSMUST00000153176.8	ENSMUSG00000099481.7	Xndc1	chr7	protein_coding	Xrcc1 N-terminal domain containing 1
chr7	101715011	101720394	+	101715011	101719104	A3SS&ES	0.25	50	50	ENSMUST00000153176.8	ENSMUSG00000099481.7	Xndc1	chr7	protein_coding	Xrcc1 N-terminal domain containing 1
chr7	101719198	101720394	+	101719198	101720426	A3SS	0.5	50	50	ENSMUST00000153176.8	ENSMUSG00000099481.7	Xndc1	chr7	protein_coding	Xrcc1 N-terminal domain containing 1
chr7	101715149	101719104	+	101715011	101719104	A5SS	0.33	50	50	ENSMUST00000153176.8	ENSMUSG00000099481.7	Xndc1	chr7	protein_coding	Xrcc1 N-terminal domain containing 1
chr7	101715149	101719104	+	101715836	101719104	A5SS&ES	0.33	50	50	ENSMUST00000141646.2	ENSMUSG00000099481.7	Xndc1	chr7	protein_coding	Xrcc1 N-terminal domain containing 1
chr7	101715149	101720394	+	101715149;101719198	101719104;101720394	ES	0.33	50	50	ENSMUST00000146450.8	ENSMUSG00000099481.7	Xndc1	chr7	protein_coding	Xrcc1 N-terminal domain containing 1
chr7	101715011	101720394	+	101719198	101720394	A5SS&ES	0.33	50	50	ENSMUST00000146450.8	ENSMUSG00000099481.7	Xndc1	chr7	protein_coding	Xrcc1 N-terminal domain containing 1
chr7	101715011	101720426	+	101715011	101719104	A3SS&ES	0.25	50	50	ENSMUST00000094130.4	ENSMUSG00000099481.7	Xndc1	chr7	protein_coding	Xrcc1 N-terminal domain containing 1
chr7	101715149	101720394	+	101719198	101720394	A5SS&ES	0.33	50	50	ENSMUST00000094130.4	ENSMUSG00000099481.7	Xndc1	chr7	protein_coding	Xrcc1 N-terminal domain containing 1
chr7	101715011	101715667	+	101715011	101720426	A3SS	0.25	50	50	ENSMUST00000123372.8	ENSMUSG00000070425.14	Xntrpc	chr7	protein_coding	Xndc1-transient receptor potential cation channel, subfamily C, member 2 readthrough
chr7	101732225	101733068	+	101731648	101733068	A5SS	0.33	50	50	ENSMUST00000123372.8	ENSMUSG00000070425.14	Xntrpc	chr7	protein_coding	Xndc1-transient receptor potential cation channel, subfamily C, member 2 readthrough
chr7	101732393	101733068	+	101731648	101733068	A5SS	0.33	50	50	ENSMUST00000123372.8	ENSMUSG00000070425.14	Xntrpc	chr7	protein_coding	Xndc1-transient receptor potential cation channel, subfamily C, member 2 readthrough
chr7	101732393	101733068	+	101732225	101733068	A5SS	0.33	50	50	ENSMUST00000084843.10	ENSMUSG00000070425.14	Xntrpc	chr7	protein_coding	Xndc1-transient receptor potential cation channel, subfamily C, member 2 readthrough
chr7	101749148	101758445	-	101749148	101751961	5pMXE	0.5	50	50	ENSMUST00000094128.9	ENSMUSG00000070424.13	Art5	chr7	protein_coding	ADP-ribosyltransferase 5
chr7	101748798	101749038	-	101748850	101749038	A3SS	0.5	50	50	ENSMUST00000094128.9	ENSMUSG00000070424.13	Art5	chr7	protein_coding	ADP-ribosyltransferase 5
chr7	101746547	101747423	-	101746547	101746988	A5SS	0.5	50	50	ENSMUST00000094128.9	ENSMUSG00000070424.13	Art5	chr7	protein_coding	ADP-ribosyltransferase 5
chr7	101755572	101756546	+	101755572	101755874	A3SS	0.5	50	50	ENSMUST00000033300.4	ENSMUSG00000030996.9	Art1	chr7	protein_coding	ADP-ribosyltransferase 1
chr7	101803035	101812896	-	101809935	101812896	A3SS&ES	0.5	50	50	ENSMUST00000210682.2	ENSMUSG00000063550.9	Nup98	chr7	protein_coding	nucleoporin 98
chr7	101813020	101825520	-	101818710	101825520	A3SS&ES	0.5	50	50	ENSMUST00000210682.2	ENSMUSG00000063550.9	Nup98	chr7	protein_coding	nucleoporin 98
chr7	101825612	101829635	-	101825612	101829584	A5SS	0.5	50	50	ENSMUST00000210682.2	ENSMUSG00000063550.9	Nup98	chr7	protein_coding	nucleoporin 98
chr7	101845095	101858946	-	101845095	101859225	A5SS	0.5	50	50	ENSMUST00000210682.2	ENSMUSG00000063550.9	Nup98	chr7	protein_coding	nucleoporin 98
chr7	101859798	101872586	+	101859798;101872008	101871989;101872586	ES	0.2	50	50	ENSMUST00000147536.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101859798	101870090	+	101859798	101871989	A3SS	0.33	50	50	ENSMUST00000147536.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101871692	101871989	+	101859798	101871989	A5SS	0.5	50	50	ENSMUST00000147536.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101871937	101872586	+	101872008	101872586	A5SS&ES	0.2	50	50	ENSMUST00000147536.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101872357	101872586	+	101872008	101872586	A5SS	0.2	50	50	ENSMUST00000147536.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101872504	101872586	+	101872008	101872586	A5SS	0.2	50	50	ENSMUST00000147536.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101859798;101872357	101871989;101875478	+	101859798	101875478	cassetteExon	0.5	100	100	ENSMUST00000140631.2	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101859798;101872697	101872586;101875478	+	101859798	101875478	cassetteExon	0.5	100	100	ENSMUST00000140631.2	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101859798	101870090	+	101859798	101875478	A3SS	0.25	50	50	ENSMUST00000140631.2	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101875067	101875478	+	101859798	101875478	A5SS	0.25	50	50	ENSMUST00000140631.2	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101875652	101885655	+	101875652;101885553	101885301;101885655	ES	0.33	50	50	ENSMUST00000120879.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101859798;101872357	101871989;101872586	+	101859798	101872586	cassetteExon	0.5	100	100	ENSMUST00000120879.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101859798;101872357	101871989;101875478	+	101859798;101872697	101872586;101875478	MXE	0.5	100	100	ENSMUST00000120879.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101875652;101884966	101884869;101885301	+	101875652	101885301	cassetteExon	0.5	100	100	ENSMUST00000120879.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101875652;101885079	101884869;101885301	+	101875652	101885301	cassetteExon	0.5	100	100	ENSMUST00000120879.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101859798	101870090	+	101859798	101872586	A3SS	0.25	50	50	ENSMUST00000120879.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101871937	101872586	+	101859798	101872586	A5SS	0.2	50	50	ENSMUST00000120879.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101872504	101872586	+	101859798	101872586	A5SS	0.2	50	50	ENSMUST00000120879.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101875067	101875478	+	101872697	101875478	A5SS	0.25	50	50	ENSMUST00000120879.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101880632	101885301	+	101875652	101885301	A5SS	0.25	50	50	ENSMUST00000120879.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101885761	101886329	+	101885749	101886329	A5SS	0.5	50	50	ENSMUST00000120879.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101872697	101885655	+	101872697	101875478	3pMXE	0.5	50	50	ENSMUST00000146996.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101872357	101875478	+	101872697	101875478	A5SS&ES	0.25	50	50	ENSMUST00000146996.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101875652	101885655	+	101875652	101885301	A3SS	0.33	50	50	ENSMUST00000127804.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101872357	101872586	+	101871937	101872586	A5SS	0.2	50	50	ENSMUST00000153020.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101872504	101872586	+	101871937	101872586	A5SS	0.2	50	50	ENSMUST00000153020.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101859798	101872586	+	101872357	101872586	5pMXE	0.2	50	50	ENSMUST00000156529.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101872357	101875478	+	101872357;101872697	101872586;101875478	ES	0.33	50	50	ENSMUST00000156529.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101872357	101875629	+	101872357	101872586	A3SS&ES	0.33	50	50	ENSMUST00000156529.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101872504	101872586	+	101872357	101872586	A5SS	0.2	50	50	ENSMUST00000156529.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101859798	101875478	+	101872357	101875478	5pMXE	0.25	50	50	ENSMUST00000138479.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101872357;101872697	101872586;101885655	+	101872357;101885553	101875478;101885655	MXE	0.5	100	100	ENSMUST00000138479.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101872357	101875629	+	101872357	101875478	A3SS	0.33	50	50	ENSMUST00000138479.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101875067	101875478	+	101872357	101875478	A5SS	0.25	50	50	ENSMUST00000138479.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101872357;101872697	101872586;101885655	+	101872357;101875652	101875478;101885655	MXE	0.5	100	100	ENSMUST00000129340.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101875652	101884869	+	101875652	101885655	A3SS	0.33	50	50	ENSMUST00000129340.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101872504	101872611	+	101872504	101872586	A3SS	0.5	50	50	ENSMUST00000126914.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101872357;101875652	101875629;101885655	+	101872357;101872697	101872586;101885655	MXE	0.5	100	100	ENSMUST00000133311.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101872697;101875652	101875478;101885655	+	101872697	101885655	cassetteExon	0.5	100	100	ENSMUST00000133311.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101885553	101885655	+	101872697	101885655	A5SS	0.33	50	50	ENSMUST00000133311.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101880632	101885301	+	101885079	101885301	A5SS&ES	0.25	50	50	ENSMUST00000145352.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101884966	101885301	+	101885079	101885301	A5SS	0.25	50	50	ENSMUST00000145352.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101880632	101885301	+	101884966	101885301	A5SS&ES	0.25	50	50	ENSMUST00000119816.9	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101872357;101872697	101872586;101885655	+	101872357;101885553	101875629;101885655	MXE	0.5	100	100	ENSMUST00000150891.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101859798	101875478	+	101872697	101875478	5pMXE	0.25	50	50	ENSMUST00000138753.8	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101875652	101885655	+	101885553	101885655	5pMXE	0.33	50	50	ENSMUST00000134621.2	ENSMUSG00000030990.19	Pgap2	chr7	protein_coding	post-GPI attachment to proteins 2
chr7	101875652	101885301	+	101885079	101885301	5pMXE	0.25	50	50	ENSMUST00000214560.2	ENSMUSG00000111339.2	00R_Pgap2	chr7	lncRNA	--
chr7	101889519	101899252	-	101889519;101898595	101898509;101899252	ES	0.5	50	50	ENSMUST00000106923.2	ENSMUSG00000073982.12	Rhog	chr7	protein_coding	ras homolog family member G
chr7	101889519	101905198	-	101889519	101899252	5pMXE	0.33	50	50	ENSMUST00000098230.11	ENSMUSG00000073982.12	Rhog	chr7	protein_coding	ras homolog family member G
chr7	101889519	101898509	-	101889519	101905198	A5SS	0.33	50	50	ENSMUST00000209968.2	ENSMUSG00000073982.12	Rhog	chr7	protein_coding	ras homolog family member G
chr7	102076524;102078073	102077981;102080092	+	102076524	102080092	cassetteExon	0.5	100	100	ENSMUST00000033289.6	ENSMUSG00000030987.6	Stim1	chr7	protein_coding	stromal interaction molecule 1
chr7	102080158;102082440	102082404;102084591	+	102080158	102084591	cassetteExon	0.5	100	100	ENSMUST00000033289.6	ENSMUSG00000030987.6	Stim1	chr7	protein_coding	stromal interaction molecule 1
chr7	102080482	102084591	+	102080158	102084591	A5SS	0.33	50	50	ENSMUST00000033289.6	ENSMUSG00000030987.6	Stim1	chr7	protein_coding	stromal interaction molecule 1
chr7	102082440	102084591	+	102080482	102084591	A5SS	0.33	50	50	ENSMUST00000209255.2	ENSMUSG00000030987.6	Stim1	chr7	protein_coding	stromal interaction molecule 1
chr7	102091250;102091546	102091483;102092194	+	102091250	102092194	cassetteExon	0.5	100	100	ENSMUST00000033283.10	ENSMUSG00000030978.11	Rrm1	chr7	protein_coding	ribonucleotide reductase M1
chr7	102115020	102116071	+	102115020	102116085	A3SS	0.5	50	50	ENSMUST00000033283.10	ENSMUSG00000030978.11	Rrm1	chr7	protein_coding	ribonucleotide reductase M1
chr7	102213332	102214596	-	102213332;102213547	102213479;102214596	ES	0.5	50	50	ENSMUST00000033264.12	ENSMUSG00000030966.14	Trim21	chr7	protein_coding	tripartite motif-containing 21
chr7	102287790;102288837	102288694;102289400	+	102287790	102289400	cassetteExon	0.5	100	100	ENSMUST00000215995.2	ENSMUSG00000073971.4	Olfr554	chr7	protein_coding	olfactory receptor 554
chr7	102314372;102317873	102317790;102319004	+	102314372	102319004	cassetteExon	0.5	100	100	ENSMUST00000217526.2	ENSMUSG00000073969.4	Olfr556	chr7	protein_coding	olfactory receptor 556
chr7	102328343	102329344	-	102328343;102328903	102328881;102329344	ES	0.5	50	50	ENSMUST00000082175.7	ENSMUSG00000073968.5	Trim68	chr7	protein_coding	tripartite motif-containing 68
chr7	102393683	102395225	-	102392259	102395225	A3SS	0.5	50	50	ENSMUST00000217123.3	ENSMUSG00000043366.17	Olfr78	chr7	protein_coding	olfactory receptor 78
chr7	102395357	102408517	-	102395357;102402340	102401472;102408517	ES	0.2	50	50	ENSMUST00000060187.15	ENSMUSG00000043366.17	Olfr78	chr7	protein_coding	olfactory receptor 78
chr7	102403119	102408517	-	102402340	102408517	A3SS	0.2	50	50	ENSMUST00000060187.15	ENSMUSG00000043366.17	Olfr78	chr7	protein_coding	olfactory receptor 78
chr7	102403135	102408517	-	102402340	102408517	A3SS	0.2	50	50	ENSMUST00000060187.15	ENSMUSG00000043366.17	Olfr78	chr7	protein_coding	olfactory receptor 78
chr7	102407614	102408517	-	102402340	102408517	A3SS	0.2	50	50	ENSMUST00000060187.15	ENSMUSG00000043366.17	Olfr78	chr7	protein_coding	olfactory receptor 78
chr7	102402340	102408517	-	102395357	102408517	A3SS	0.2	50	50	ENSMUST00000168007.3	ENSMUSG00000043366.17	Olfr78	chr7	protein_coding	olfactory receptor 78
chr7	102403119	102408517	-	102395357	102408517	A3SS	0.2	50	50	ENSMUST00000168007.3	ENSMUSG00000043366.17	Olfr78	chr7	protein_coding	olfactory receptor 78
chr7	102403135	102408517	-	102395357	102408517	A3SS	0.2	50	50	ENSMUST00000168007.3	ENSMUSG00000043366.17	Olfr78	chr7	protein_coding	olfactory receptor 78
chr7	102407614	102408517	-	102395357	102408517	A3SS	0.2	50	50	ENSMUST00000168007.3	ENSMUSG00000043366.17	Olfr78	chr7	protein_coding	olfactory receptor 78
chr7	102395357	102401472	-	102395357	102408517	A5SS	0.5	50	50	ENSMUST00000168007.3	ENSMUSG00000043366.17	Olfr78	chr7	protein_coding	olfactory receptor 78
chr7	102403119	102408517	-	102403135	102408517	A3SS	0.2	50	50	ENSMUST00000210453.3	ENSMUSG00000110008.6	Olfr560	chr7	protein_coding	olfactory receptor 560
chr7	102407614	102408517	-	102403135	102408517	A3SS	0.2	50	50	ENSMUST00000210453.3	ENSMUSG00000110008.6	Olfr560	chr7	protein_coding	olfactory receptor 560
chr7	102403135	102406460	-	102403135	102408517	A5SS	0.5	50	50	ENSMUST00000210453.3	ENSMUSG00000110008.6	Olfr560	chr7	protein_coding	olfactory receptor 560
chr7	102407614	102408517	-	102403119	102408517	A3SS	0.2	50	50	ENSMUST00000232246.3	ENSMUSG00000110008.6	Olfr560	chr7	protein_coding	olfactory receptor 560
chr7	102403135	102408517	-	102403135;102407614	102406460;102408517	ES	0.25	50	50	ENSMUST00000239110.2	ENSMUSG00000110008.6	Olfr560	chr7	protein_coding	olfactory receptor 560
chr7	102559065	102566355	-	102559065	102566360	A5SS	0.5	50	50	ENSMUST00000215773.2	ENSMUSG00000043310.5	Olfr571	chr7	protein_coding	olfactory receptor 571
chr7	102573662	102576735	+	102573662;102574285	102574181;102576735	ES	0.5	50	50	ENSMUST00000215782.3	ENSMUSG00000073963.4	Olfr572	chr7	protein_coding	olfactory receptor 572
chr7	102606174	102607934	-	102606162	102607934	A3SS	0.5	50	50	ENSMUST00000216420.2	ENSMUSG00000066269.8	Olfr575	chr7	protein_coding	olfactory receptor 575
chr7	102624132	102624801	-	102624132	102624939	A5SS	0.5	50	50	ENSMUST00000215237.2	ENSMUSG00000043354.3	Olfr577	chr7	protein_coding	olfactory receptor 577
chr7	102687592	102690658	+	102687592	102690615	A3SS	0.5	50	50	ENSMUST00000211036.3	ENSMUSG00000073961.5	Olfr582	chr7	protein_coding	olfactory receptor 582
chr7	102687724	102690615	+	102687592	102690615	A5SS	0.5	50	50	ENSMUST00000211036.3	ENSMUSG00000073961.5	Olfr582	chr7	protein_coding	olfactory receptor 582
chr7	102772126;102773723	102773309;102774777	-	102772126	102774777	cassetteExon	0.5	100	100	ENSMUST00000211075.3	ENSMUSG00000066268.7	Olfr586	chr7	protein_coding	olfactory receptor 586
chr7	102772126	102774777	-	102773723	102774777	A3SS	0.5	50	50	ENSMUST00000215304.2	ENSMUSG00000066268.7	Olfr586	chr7	protein_coding	olfactory receptor 586
chr7	102822871	102824104	-	102818705	102824104	A3SS	0.5	50	50	ENSMUST00000218115.2	ENSMUSG00000057461.4	Olfr591	chr7	protein_coding	olfactory receptor 591
chr7	103008453	103011797	-	103008456	103011797	A3SS	0.33	50	50	ENSMUST00000214110.2	ENSMUSG00000109951.3	Olfr601	chr7	protein_coding	olfactory receptor 601
chr7	103008500	103011797	-	103008456	103011797	A3SS	0.33	50	50	ENSMUST00000214110.2	ENSMUSG00000109951.3	Olfr601	chr7	protein_coding	olfactory receptor 601
chr7	103008500	103011797	-	103008453	103011797	A3SS	0.33	50	50	ENSMUST00000217416.2	ENSMUSG00000109951.3	Olfr601	chr7	protein_coding	olfactory receptor 601
chr7	103065952	103066735	+	103064328	103066735	A5SS	0.5	50	50	ENSMUST00000106892.2	ENSMUSG00000058976.5	Usp17lc	chr7	protein_coding	ubiquitin specific peptidase 17-like C
chr7	103098646	103100473	+	103098299	103100473	A5SS	0.5	50	50	ENSMUST00000217250.2	ENSMUSG00000073949.5	Olfr606	chr7	protein_coding	olfactory receptor 606
chr7	103142253;103145238	103145128;103146493	-	103142253	103146493	cassetteExon	0.5	100	100	ENSMUST00000216360.2	ENSMUSG00000046396.8	Olfr609	chr7	protein_coding	olfactory receptor 609
chr7	103156179	103161285	-	103155922	103161285	A3SS	0.5	50	50	ENSMUST00000213422.2	ENSMUSG00000045584.5	Olfr610	chr7	protein_coding	olfactory receptor 610
chr7	103205319;103205800	103205735;103209637	+	103205319	103209637	cassetteExon	0.5	100	100	ENSMUST00000214345.2	ENSMUSG00000073947.5	Olfr615	chr7	protein_coding	olfactory receptor 615
chr7	103214523	103218294	-	103214523	103217768	5pMXE	0.5	50	50	ENSMUST00000214806.2	ENSMUSG00000047544.8	Olfr616	chr7	protein_coding	olfactory receptor 616
chr7	103222453	103222719	+	103222396	103222719	A5SS	0.5	50	50	ENSMUST00000216516.2	ENSMUSG00000073946.6	Olfr617	chr7	protein_coding	olfactory receptor 617
chr7	103289396	103291500	-	103289110	103291500	A3SS	0.33	50	50	ENSMUST00000216337.2	ENSMUSG00000050085.6	Olfr622	chr7	protein_coding	olfactory receptor 622
chr7	103289493	103291500	-	103289110	103291500	A3SS	0.33	50	50	ENSMUST00000216337.2	ENSMUSG00000050085.6	Olfr622	chr7	protein_coding	olfactory receptor 622
chr7	103289396	103291500	-	103289493	103291500	A3SS	0.33	50	50	ENSMUST00000213536.2	ENSMUSG00000050085.6	Olfr622	chr7	protein_coding	olfactory receptor 622
chr7	103391169	103393791	-	103391169	103393652	5pMXE	0.5	50	50	ENSMUST00000216300.2	ENSMUSG00000047545.6	Olfr629	chr7	protein_coding	olfactory receptor 629
chr7	103405708	103406520	-	103404863	103406520	A3SS	0.5	50	50	ENSMUST00000106880.3	ENSMUSG00000050281.5	Olfr630	chr7	protein_coding	olfactory receptor 630
chr7	103553124	103553388	+	103552774	103553388	A5SS	0.5	50	50	ENSMUST00000106864.5	ENSMUSG00000110259.3	Olfr65	chr7	protein_coding	olfactory receptor 65
chr7	103583617	103587147	+	103583617	103586569	A3SS	0.5	50	50	ENSMUST00000214711.2	ENSMUSG00000073938.4	Olfr632	chr7	protein_coding	olfactory receptor 632
chr7	103671608	103672394	-	103661935	103672394	A3SS	0.5	50	50	ENSMUST00000138055.2	ENSMUSG00000109824.5	Olfr643	chr7	protein_coding	olfactory receptor 643
chr7	103672563	103674658	-	103672548	103674658	A3SS	0.5	50	50	ENSMUST00000138055.2	ENSMUSG00000109824.5	Olfr643	chr7	protein_coding	olfactory receptor 643
chr7	103661935	103666439	-	103661935	103672394	A5SS	0.5	50	50	ENSMUST00000138055.2	ENSMUSG00000109824.5	Olfr643	chr7	protein_coding	olfactory receptor 643
chr7	103708842	103710556	-	103708842	103761318	A5SS	0.5	50	50	ENSMUST00000138055.2	ENSMUSG00000109824.5	Olfr643	chr7	protein_coding	olfactory receptor 643
chr7	103684685	103689211	+	103684685	103688935	A3SS	0.5	50	50	ENSMUST00000213214.2	ENSMUSG00000073932.3	Olfr641	chr7	protein_coding	olfactory receptor 641
chr7	103718268	103720344	-	103718268;103719177	103719112;103720344	ES	0.5	50	50	ENSMUST00000213184.2	ENSMUSG00000110012.3	Olfr644	chr7	protein_coding	olfactory receptor 644
chr7	103754306	103755423	+	103754306	103756086	A3SS	0.5	50	50	ENSMUST00000214291.2	ENSMUSG00000073931.4	Olfr646	chr7	protein_coding	olfactory receptor 646
chr7	103809724	103810912	-	103809724;103810134	103809910;103810912	ES	0.5	50	50	ENSMUST00000051137.15	ENSMUSG00000044265.17	Olfm5	chr7	protein_coding	olfactomedin 5
chr7	103868090;103870505	103870423;103874714	+	103868090	103874714	cassetteExon	0.5	100	100	ENSMUST00000144538.2	ENSMUSG00000072244.12	Trim6	chr7	protein_coding	tripartite motif-containing 6
chr7	103868744	103874714	+	103868090	103874714	A5SS	0.33	50	50	ENSMUST00000144538.2	ENSMUSG00000072244.12	Trim6	chr7	protein_coding	tripartite motif-containing 6
chr7	103868744	103874714	+	103870505	103874714	A5SS&ES	0.33	50	50	ENSMUST00000144455.2	ENSMUSG00000072244.12	Trim6	chr7	protein_coding	tripartite motif-containing 6
chr7	103868090	103874714	+	103870505	103874714	5pMXE	0.33	50	50	ENSMUST00000153324.2	ENSMUSG00000072244.12	Trim6	chr7	protein_coding	tripartite motif-containing 6
chr7	103893792	103896738	+	103893799	103896738	A5SS	0.33	50	50	ENSMUST00000106849.9	ENSMUSG00000056144.15	Trim34a	chr7	protein_coding	tripartite motif-containing 34A
chr7	103893813	103896738	+	103893799	103896738	A5SS	0.33	50	50	ENSMUST00000106849.9	ENSMUSG00000056144.15	Trim34a	chr7	protein_coding	tripartite motif-containing 34A
chr7	103893792	103896738	+	103893813	103896738	A5SS	0.33	50	50	ENSMUST00000060315.12	ENSMUSG00000056144.15	Trim34a	chr7	protein_coding	tripartite motif-containing 34A
chr7	103915773;103922583	103922561;103925813	-	103915773;103924002	103923980;103925813	MXE	0.5	100	100	ENSMUST00000098179.9	ENSMUSG00000060441.16	Trim5	chr7	protein_coding	tripartite motif-containing 5
chr7	103950069	103950301	-	103950069	103950199	5pMXE	0.5	50	50	ENSMUST00000142641.2	ENSMUSG00000066258.14	Trim12a	chr7	protein_coding	tripartite motif-containing 12A
chr7	103953593;103955301	103955206;103956119	-	103953593	103956119	cassetteExon	0.5	100	100	ENSMUST00000106837.8	ENSMUSG00000066258.14	Trim12a	chr7	protein_coding	tripartite motif-containing 12A
chr7	103956594	103963692	-	103956594	103964618	A5SS	0.33	50	50	ENSMUST00000106837.8	ENSMUSG00000066258.14	Trim12a	chr7	protein_coding	tripartite motif-containing 12A
chr7	103956594	103964508	-	103956594	103964618	A5SS	0.33	50	50	ENSMUST00000106837.8	ENSMUSG00000066258.14	Trim12a	chr7	protein_coding	tripartite motif-containing 12A
chr7	103956594;103963849	103963692;103964508	-	103956594	103964508	cassetteExon	0.5	100	100	ENSMUST00000070943.7	ENSMUSG00000066258.14	Trim12a	chr7	protein_coding	tripartite motif-containing 12A
chr7	103956594	103964508	-	103963849	103964508	3pMXE	0.5	50	50	ENSMUST00000134564.2	ENSMUSG00000066258.14	Trim12a	chr7	protein_coding	tripartite motif-containing 12A
chr7	103968093;103972841	103972686;103973739	+	103968093	103973739	cassetteExon	0.5	100	100	ENSMUST00000152031.8	ENSMUSG00000087175.8	Gm15133	chr7	lncRNA	predicted gene 15133
chr7	103980660	103983792	+	103980660	103980845	A3SS&ES	0.5	50	50	ENSMUST00000180136.2	ENSMUSG00000090215.10	Trim34b	chr7	protein_coding	tripartite motif-containing 34B
chr7	103997610	104002511	-	103997610	104002401	A5SS	0.5	50	50	ENSMUST00000059037.15	ENSMUSG00000057143.16	Trim12c	chr7	protein_coding	tripartite motif-containing 12C
chr7	104008971	104012909	-	104008971	104011914	A5SS	0.5	50	50	ENSMUST00000145982.2	ENSMUSG00000052749.10	Trim30b	chr7	protein_coding	tripartite motif-containing 30B
chr7	104061522	104066030	-	104061522	104070642	A5SS	0.5	50	50	ENSMUST00000076922.6	ENSMUSG00000030921.18	Trim30a	chr7	protein_coding	tripartite motif-containing 30A
chr7	104121842	104122386	-	104121842;104122117	104122091;104122386	ES	0.5	50	50	ENSMUST00000071069.13	ENSMUSG00000057596.14	Trim30d	chr7	protein_coding	tripartite motif-containing 30D
chr7	104133480;104137258	104136783;104156878	-	104133480	104156878	cassetteExon	0.5	100	100	ENSMUST00000071069.13	ENSMUSG00000057596.14	Trim30d	chr7	protein_coding	tripartite motif-containing 30D
chr7	104199405	104202098	+	104199405	104202448	A3SS	0.5	50	50	ENSMUST00000216246.2	ENSMUSG00000073928.6	Olfr651	chr7	protein_coding	olfactory receptor 651
chr7	104210374	104210802	+	104210374	104212780	A3SS	0.5	50	50	ENSMUST00000219111.2	ENSMUSG00000073927.7	Olfr652	chr7	protein_coding	olfactory receptor 652
chr7	104210374	104210802	+	104210273	104210802	A5SS	0.5	50	50	ENSMUST00000215410.2	ENSMUSG00000073927.7	Olfr652	chr7	protein_coding	olfactory receptor 652
chr7	104226805	104228602	+	104226805	104228581	A3SS	0.5	50	50	ENSMUST00000217466.2	ENSMUSG00000073926.5	Olfr653	chr7	protein_coding	olfactory receptor 653
chr7	104246426	104250894	-	104246426	104250861	A5SS	0.5	50	50	ENSMUST00000216750.2	ENSMUSG00000051182.6	Olfr655	chr7	protein_coding	olfactory receptor 655
chr7	104246426	104250894	-	104245720	104250894	A3SS	0.5	50	50	ENSMUST00000215434.2	ENSMUSG00000051182.6	Olfr655	chr7	protein_coding	olfactory receptor 655
chr7	104274138	104284879	+	104274138;104284241	104283793;104284879	ES	0.5	50	50	ENSMUST00000215454.3	ENSMUSG00000073923.5	Olfr657	chr7	protein_coding	olfactory receptor 657
chr7	104336320	104337233	+	104336320	104336987	A3SS	0.5	50	50	ENSMUST00000214876.2	ENSMUSG00000073920.5	Olfr661	chr7	protein_coding	olfactory receptor 661
chr7	104419010;104422158	104422057;104426650	-	104419010;104419888	104419787;104426650	MXE	0.5	100	100	ENSMUST00000211384.2	ENSMUSG00000043073.11	Usp17le	chr7	protein_coding	ubiquitin specific peptidase 17-like E
chr7	104490897	104491684	-	104490894	104491684	A3SS	0.5	50	50	ENSMUST00000106814.3	ENSMUSG00000062369.3	Usp17lb	chr7	protein_coding	ubiquitin specific peptidase 17-like B
chr7	104527265;104528240	104528017;104529844	+	104527265	104529844	cassetteExon	0.5	100	100	ENSMUST00000216257.2	ENSMUSG00000073917.3	Olfr665	chr7	protein_coding	olfactory receptor 665
chr7	104527265	104529844	+	104528240	104529844	A5SS	0.5	50	50	ENSMUST00000216971.2	ENSMUSG00000073917.3	Olfr665	chr7	protein_coding	olfactory receptor 665
chr7	104559381	104559477	+	104558103	104559477	A5SS	0.5	50	50	ENSMUST00000209737.2	ENSMUSG00000109734.2	Gm45272	chr7	lncRNA	predicted gene 45272
chr7	104583632	104587676	+	104583632;104585175	104585035;104587676	ES	0.5	50	50	ENSMUST00000214260.2	ENSMUSG00000073916.4	Olfr669	chr7	protein_coding	olfactory receptor 669
chr7	104625215	104628290	-	104625215;104625765	104625689;104628290	ES	0.5	50	50	ENSMUST00000217091.2	ENSMUSG00000094531.4	Olfr671	chr7	protein_coding	olfactory receptor 671
chr7	104674271	104675495	-	104674199	104675495	A3SS	0.5	50	50	ENSMUST00000210113.3	ENSMUSG00000096773.5	Olfr675	chr7	protein_coding	olfactory receptor 675
chr7	104674271;104675585	104675495;104677626	-	104674271	104677626	cassetteExon	0.5	100	100	ENSMUST00000215899.2	ENSMUSG00000096773.5	Olfr675	chr7	protein_coding	olfactory receptor 675
chr7	104682100	104684762	+	104682100	104684352	A3SS	0.5	50	50	ENSMUST00000219602.2	ENSMUSG00000073915.6	Olfr676	chr7	protein_coding	olfactory receptor 676
chr7	104730467;104734189	104734024;104734888	+	104730467	104734888	cassetteExon	0.5	100	100	ENSMUST00000215704.2	ENSMUSG00000096029.5	Olfr679	chr7	protein_coding	olfactory receptor 679
chr7	104730467	104734993	+	104730467	104734888	A3SS	0.33	50	50	ENSMUST00000215704.2	ENSMUSG00000096029.5	Olfr679	chr7	protein_coding	olfactory receptor 679
chr7	104730467	104734993	+	104730467	104734024	A3SS&ES	0.33	50	50	ENSMUST00000214328.3	ENSMUSG00000096029.5	Olfr679	chr7	protein_coding	olfactory receptor 679
chr7	104767343	104770629	+	104767343;104769934	104769587;104770629	ES	0.5	50	50	ENSMUST00000216247.2	ENSMUSG00000095248.4	Olfr681	chr7	protein_coding	olfactory receptor 681
chr7	104767343	104769771	+	104767343	104769587	A3SS	0.33	50	50	ENSMUST00000216247.2	ENSMUSG00000095248.4	Olfr681	chr7	protein_coding	olfactory receptor 681
chr7	104769934	104770734	+	104769934	104770629	A3SS	0.5	50	50	ENSMUST00000216247.2	ENSMUSG00000095248.4	Olfr681	chr7	protein_coding	olfactory receptor 681
chr7	104767343;104769934	104769771;104770629	+	104767343	104770629	cassetteExon	0.5	100	100	ENSMUST00000215517.2	ENSMUSG00000095248.4	Olfr681	chr7	protein_coding	olfactory receptor 681
chr7	104767343	104770629	+	104767343	104769771	A3SS&ES	0.33	50	50	ENSMUST00000215180.2	ENSMUSG00000095248.4	Olfr681	chr7	protein_coding	olfactory receptor 681
chr7	104807002	104812783	-	104807002	104812629	5pMXE	0.5	50	50	ENSMUST00000215552.2	ENSMUSG00000047225.9	Olfr684	chr7	protein_coding	olfactory receptor 684
chr7	104832492	104835127	-	104832492;104834001	104833855;104835127	ES	0.33	50	50	ENSMUST00000214712.2	ENSMUSG00000047794.7	Olfr685	chr7	protein_coding	olfactory receptor 685
chr7	104833921	104835127	-	104834001	104835127	A3SS	0.33	50	50	ENSMUST00000214712.2	ENSMUSG00000047794.7	Olfr685	chr7	protein_coding	olfactory receptor 685
chr7	104832492	104835127	-	104832492;104833921	104833855;104835127	ES	0.33	50	50	ENSMUST00000217432.2	ENSMUSG00000047794.7	Olfr685	chr7	protein_coding	olfactory receptor 685
chr7	104853580	104856008	-	104853580	104854266	5pMXE	0.33	50	50	ENSMUST00000216613.2	ENSMUSG00000048425.4	Olfr686	chr7	protein_coding	olfactory receptor 686
chr7	104853580	104856597	-	104853580	104854266	5pMXE	0.33	50	50	ENSMUST00000216613.2	ENSMUSG00000048425.4	Olfr686	chr7	protein_coding	olfactory receptor 686
chr7	104853580	104856597	-	104853580	104856008	5pMXE	0.33	50	50	ENSMUST00000214147.2	ENSMUSG00000048425.4	Olfr686	chr7	protein_coding	olfactory receptor 686
chr7	104979468	104983264	-	104979431	104983264	A3SS	0.5	50	50	ENSMUST00000211006.3	ENSMUSG00000050266.7	Olfr690	chr7	protein_coding	olfactory receptor 690
chr7	105034358	105037391	-	105034358;105034629	105034550;105037391	ES	0.5	50	50	ENSMUST00000179474.9	ENSMUSG00000044465.20	Fam160a2	chr7	protein_coding	family with sequence similarity 160, member A2
chr7	105039559;105040874	105040784;105049091	-	105039559	105049091	cassetteExon	0.5	100	100	ENSMUST00000179474.9	ENSMUSG00000044465.20	Fam160a2	chr7	protein_coding	family with sequence similarity 160, member A2
chr7	105030519	105032988	-	105030784	105032988	A3SS&ES	0.5	50	50	ENSMUST00000179474.9	ENSMUSG00000044465.20	Fam160a2	chr7	protein_coding	family with sequence similarity 160, member A2
chr7	105038131	105038461	-	105038144	105038461	A3SS	0.5	50	50	ENSMUST00000179474.9	ENSMUSG00000044465.20	Fam160a2	chr7	protein_coding	family with sequence similarity 160, member A2
chr7	105030449	105030583	-	105030449	105030606	A5SS	0.5	50	50	ENSMUST00000179474.9	ENSMUSG00000044465.20	Fam160a2	chr7	protein_coding	family with sequence similarity 160, member A2
chr7	105030784	105033582	-	105030784	105032988	A5SS	0.5	50	50	ENSMUST00000179474.9	ENSMUSG00000044465.20	Fam160a2	chr7	protein_coding	family with sequence similarity 160, member A2
chr7	105033779	105034153	-	105033779	105034195	A5SS	0.5	50	50	ENSMUST00000179474.9	ENSMUSG00000044465.20	Fam160a2	chr7	protein_coding	family with sequence similarity 160, member A2
chr7	105039559	105048855	-	105039559	105049091	A5SS	0.33	50	50	ENSMUST00000179474.9	ENSMUSG00000044465.20	Fam160a2	chr7	protein_coding	family with sequence similarity 160, member A2
chr7	105039559	105048855	-	105039559	105040784	A5SS&ES	0.33	50	50	ENSMUST00000122327.7	ENSMUSG00000044465.20	Fam160a2	chr7	protein_coding	family with sequence similarity 160, member A2
chr7	105034358	105037391	-	105034629	105037391	3pMXE	0.5	50	50	ENSMUST00000136298.2	ENSMUSG00000044465.20	Fam160a2	chr7	protein_coding	family with sequence similarity 160, member A2
chr7	105024376	105026306	+	105024376	105026277	A3SS	0.5	50	50	ENSMUST00000211523.2	ENSMUSG00000078611.4	Gm5901	chr7	protein_coding	predicted gene 5901
chr7	105027104	105027462	+	105027104	105027364	A3SS	0.5	50	50	ENSMUST00000106805.4	ENSMUSG00000078611.4	Gm5901	chr7	protein_coding	predicted gene 5901
chr7	105083902	105119817	+	105083902	105084097	3pMXE	0.5	50	50	ENSMUST00000033189.6	ENSMUSG00000030898.16	Cckbr	chr7	protein_coding	cholecystokinin B receptor
chr7	105214854;105215158	105215153;105215258	-	105214854	105215258	cassetteExon	0.5	100	100	ENSMUST00000191011.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105214860	105215258	-	105214854	105215258	A3SS	0.33	50	50	ENSMUST00000191011.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105215904	105216286	-	105215904	105216290	A5SS	0.5	50	50	ENSMUST00000191011.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105216691	105218447	-	105216691	105216785	A5SS&ES	0.5	50	50	ENSMUST00000191011.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105216960	105217826	-	105216960	105222889	A5SS	0.2	50	50	ENSMUST00000191011.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105216960	105218000	-	105216960	105222889	A5SS	0.2	50	50	ENSMUST00000191011.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105216960	105218447	-	105216960	105222889	A5SS	0.2	50	50	ENSMUST00000191011.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105216960	105230342	-	105216960	105222889	A5SS&ES	0.2	50	50	ENSMUST00000191011.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105223623	105224637	-	105223623	105230690	A5SS	0.33	50	50	ENSMUST00000191011.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105223623	105230342	-	105223623	105230690	A5SS	0.33	50	50	ENSMUST00000191011.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105216960	105218000	-	105216960	105217826	5pMXE	0.2	50	50	ENSMUST00000188368.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105216960	105218447	-	105216960	105217826	5pMXE	0.2	50	50	ENSMUST00000188368.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105216960	105230342	-	105216960	105217826	5pMXE	0.2	50	50	ENSMUST00000188368.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105214860	105215258	-	105215158	105215258	A3SS&ES	0.33	50	50	ENSMUST00000188368.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105216960	105218447	-	105216960;105217838	105217826;105218447	ES	0.2	50	50	ENSMUST00000190369.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105216960;105218083	105218000;105218447	-	105216960;105217838	105217826;105218447	MXE	0.5	100	100	ENSMUST00000190369.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105217865	105218447	-	105217838	105218447	A3SS	0.2	50	50	ENSMUST00000190369.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105216691	105218447	-	105216691;105216960	105216785;105218447	ES	0.2	50	50	ENSMUST00000189072.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105216960	105230342	-	105216960	105218447	5pMXE	0.2	50	50	ENSMUST00000189072.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105216960;105217865	105217826;105218447	-	105216960	105218447	cassetteExon	0.5	100	100	ENSMUST00000189072.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105216960;105218083	105217826;105218447	-	105216960	105218447	cassetteExon	0.5	100	100	ENSMUST00000189072.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105216960;105218083	105218000;105218447	-	105216960	105218447	cassetteExon	0.5	100	100	ENSMUST00000189072.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105216960	105230342	-	105216960;105223623	105222889;105230342	ES	0.33	50	50	ENSMUST00000191601.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105223623;105224751	105224637;105230342	-	105223623	105230342	cassetteExon	0.5	100	100	ENSMUST00000191601.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105216960	105218447	-	105216960	105218000	5pMXE	0.2	50	50	ENSMUST00000188001.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105216960	105230342	-	105216960	105218000	5pMXE	0.2	50	50	ENSMUST00000188001.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105216960;105217865	105217826;105218000	-	105216960	105218000	cassetteExon	0.5	100	100	ENSMUST00000188001.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105214592;105216353	105216290;105216461	-	105214592;105215385	105214740;105216461	MXE	0.5	100	100	ENSMUST00000189265.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105217838	105218447	-	105216691	105218447	A3SS	0.2	50	50	ENSMUST00000189265.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105217865	105218447	-	105216691	105218447	A3SS	0.2	50	50	ENSMUST00000189265.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105218083	105218447	-	105216691	105218447	A3SS	0.2	50	50	ENSMUST00000189265.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105215385	105215755	-	105215385	105216461	A5SS	0.5	50	50	ENSMUST00000189265.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105215904	105216290	-	105214592	105216290	A3SS	0.5	50	50	ENSMUST00000211614.2	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105214592	105214740	-	105214592	105216290	A5SS	0.5	50	50	ENSMUST00000211614.2	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105214854	105215258	-	105215158	105215258	A3SS	0.33	50	50	ENSMUST00000186814.2	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105223623	105230342	-	105216960	105230342	A3SS	0.33	50	50	ENSMUST00000188440.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105224751	105230342	-	105216960	105230342	A3SS	0.33	50	50	ENSMUST00000188440.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105217865	105218447	-	105217865;105218083	105218000;105218447	ES	0.2	50	50	ENSMUST00000187683.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105217838	105218447	-	105218083	105218447	A3SS&ES	0.2	50	50	ENSMUST00000187683.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105216960;105217865	105217826;105218447	-	105216960;105218083	105218000;105218447	MXE	0.5	100	100	ENSMUST00000210079.2	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105217865	105218773	-	105217865	105218447	5pMXE	0.33	50	50	ENSMUST00000187051.7	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105215385	105216461	-	105216353	105216461	3pMXE	0.5	50	50	ENSMUST00000186868.2	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105217865	105218000	-	105217865	105218773	A5SS	0.33	50	50	ENSMUST00000186868.2	ENSMUSG00000037032.17	Apbb1	chr7	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 1
chr7	105245557	105248869	-	105248585	105248869	A3SS&ES	0.5	50	50	ENSMUST00000033185.10	ENSMUSG00000030895.10	Hpx	chr7	protein_coding	hemopexin
chr7	105260417	105260536	-	105253886	105260536	A3SS	0.5	50	50	ENSMUST00000106791.8	ENSMUSG00000036989.17	Trim3	chr7	protein_coding	tripartite motif-containing 3
chr7	105268435	105268590	-	105268417	105268590	A3SS	0.5	50	50	ENSMUST00000106791.8	ENSMUSG00000036989.17	Trim3	chr7	protein_coding	tripartite motif-containing 3
chr7	105268417	105268595	-	105268417	105268590	A5SS	0.5	50	50	ENSMUST00000106791.8	ENSMUSG00000036989.17	Trim3	chr7	protein_coding	tripartite motif-containing 3
chr7	105274778	105282399	-	105274778	105282584	A5SS	0.33	50	50	ENSMUST00000106791.8	ENSMUSG00000036989.17	Trim3	chr7	protein_coding	tripartite motif-containing 3
chr7	105274778	105282610	-	105274778	105282584	A5SS	0.33	50	50	ENSMUST00000106791.8	ENSMUSG00000036989.17	Trim3	chr7	protein_coding	tripartite motif-containing 3
chr7	105274778	105282399	-	105274778	105282610	A5SS	0.33	50	50	ENSMUST00000057525.14	ENSMUSG00000036989.17	Trim3	chr7	protein_coding	tripartite motif-containing 3
chr7	105286485	105287416	-	105286485;105287247	105287026;105287416	ES	0.5	50	50	ENSMUST00000131446.8	ENSMUSG00000030881.16	Arfip2	chr7	protein_coding	ADP-ribosylation factor interacting protein 2
chr7	105287551	105288216	-	105287534	105288216	A3SS	0.5	50	50	ENSMUST00000131446.8	ENSMUSG00000030881.16	Arfip2	chr7	protein_coding	ADP-ribosylation factor interacting protein 2
chr7	105288300	105288532	-	105288312	105288532	A3SS	0.33	50	50	ENSMUST00000131446.8	ENSMUSG00000030881.16	Arfip2	chr7	protein_coding	ADP-ribosylation factor interacting protein 2
chr7	105288396	105288532	-	105288312	105288532	A3SS	0.33	50	50	ENSMUST00000131446.8	ENSMUSG00000030881.16	Arfip2	chr7	protein_coding	ADP-ribosylation factor interacting protein 2
chr7	105288632	105289452	-	105288672	105289452	A3SS	0.5	50	50	ENSMUST00000131446.8	ENSMUSG00000030881.16	Arfip2	chr7	protein_coding	ADP-ribosylation factor interacting protein 2
chr7	105286485	105286859	-	105286485	105287026	A5SS	0.2	50	50	ENSMUST00000131446.8	ENSMUSG00000030881.16	Arfip2	chr7	protein_coding	ADP-ribosylation factor interacting protein 2
chr7	105286485	105287070	-	105286485	105287026	A5SS	0.2	50	50	ENSMUST00000131446.8	ENSMUSG00000030881.16	Arfip2	chr7	protein_coding	ADP-ribosylation factor interacting protein 2
chr7	105286485	105287147	-	105286485	105287026	A5SS	0.2	50	50	ENSMUST00000131446.8	ENSMUSG00000030881.16	Arfip2	chr7	protein_coding	ADP-ribosylation factor interacting protein 2
chr7	105288672	105289347	-	105288672	105289452	A5SS	0.5	50	50	ENSMUST00000131446.8	ENSMUSG00000030881.16	Arfip2	chr7	protein_coding	ADP-ribosylation factor interacting protein 2
chr7	105286485	105287147	-	105286485	105286859	5pMXE	0.2	50	50	ENSMUST00000127853.8	ENSMUSG00000030881.16	Arfip2	chr7	protein_coding	ADP-ribosylation factor interacting protein 2
chr7	105286485	105287416	-	105286485	105286859	5pMXE	0.2	50	50	ENSMUST00000127853.8	ENSMUSG00000030881.16	Arfip2	chr7	protein_coding	ADP-ribosylation factor interacting protein 2
chr7	105286485	105287070	-	105286485	105286859	A5SS	0.2	50	50	ENSMUST00000127853.8	ENSMUSG00000030881.16	Arfip2	chr7	protein_coding	ADP-ribosylation factor interacting protein 2
chr7	105286485	105287416	-	105286485;105287247	105287147;105287416	ES	0.5	50	50	ENSMUST00000137931.8	ENSMUSG00000030881.16	Arfip2	chr7	protein_coding	ADP-ribosylation factor interacting protein 2
chr7	105286485	105287070	-	105286485	105287147	A5SS	0.2	50	50	ENSMUST00000137931.8	ENSMUSG00000030881.16	Arfip2	chr7	protein_coding	ADP-ribosylation factor interacting protein 2
chr7	105286485	105287416	-	105286485;105287247	105287070;105287416	ES	0.5	50	50	ENSMUST00000209870.2	ENSMUSG00000030881.16	Arfip2	chr7	protein_coding	ADP-ribosylation factor interacting protein 2
chr7	105286485;105286932	105286859;105287070	-	105286485	105287070	cassetteExon	0.5	100	100	ENSMUST00000209870.2	ENSMUSG00000030881.16	Arfip2	chr7	protein_coding	ADP-ribosylation factor interacting protein 2
chr7	105288396	105288532	-	105288300	105288532	A3SS	0.33	50	50	ENSMUST00000209550.2	ENSMUSG00000030881.16	Arfip2	chr7	protein_coding	ADP-ribosylation factor interacting protein 2
chr7	105286485;105287247	105286859;105287416	-	105286485	105287416	cassetteExon	0.5	100	100	ENSMUST00000210911.2	ENSMUSG00000030881.16	Arfip2	chr7	protein_coding	ADP-ribosylation factor interacting protein 2
chr7	105286485	105287416	-	105286485	105287026	5pMXE	0.2	50	50	ENSMUST00000134613.2	ENSMUSG00000030881.16	Arfip2	chr7	protein_coding	ADP-ribosylation factor interacting protein 2
chr7	105286485	105287416	-	105287247	105287416	3pMXE	0.5	50	50	ENSMUST00000157028.2	ENSMUSG00000030881.16	Arfip2	chr7	protein_coding	ADP-ribosylation factor interacting protein 2
chr7	105289829	105290235	+	105289829;105290064	105289969;105290235	ES	0.33	50	50	ENSMUST00000106783.8	ENSMUSG00000089847.9	Timm10b	chr7	protein_coding	translocase of inner mitochondrial membrane 10B
chr7	105289829	105290020	+	105289829	105289969	A3SS	0.33	50	50	ENSMUST00000106783.8	ENSMUSG00000089847.9	Timm10b	chr7	protein_coding	translocase of inner mitochondrial membrane 10B
chr7	105289882	105289969	+	105289829	105289969	A5SS	0.5	50	50	ENSMUST00000106783.8	ENSMUSG00000089847.9	Timm10b	chr7	protein_coding	translocase of inner mitochondrial membrane 10B
chr7	105290075	105290235	+	105290064	105290235	A5SS	0.33	50	50	ENSMUST00000106783.8	ENSMUSG00000089847.9	Timm10b	chr7	protein_coding	translocase of inner mitochondrial membrane 10B
chr7	105290435	105292518	+	105290435	105290829	3pMXE	0.25	50	50	ENSMUST00000058333.10	ENSMUSG00000089847.9	Timm10b	chr7	protein_coding	translocase of inner mitochondrial membrane 10B
chr7	105290435	105300279	+	105290435	105290829	3pMXE	0.25	50	50	ENSMUST00000058333.10	ENSMUSG00000089847.9	Timm10b	chr7	protein_coding	translocase of inner mitochondrial membrane 10B
chr7	105290435	105304829	+	105290435	105290829	3pMXE	0.25	50	50	ENSMUST00000058333.10	ENSMUSG00000089847.9	Timm10b	chr7	protein_coding	translocase of inner mitochondrial membrane 10B
chr7	105290367	105290829	+	105290435	105290829	A5SS	0.5	50	50	ENSMUST00000058333.10	ENSMUSG00000089847.9	Timm10b	chr7	protein_coding	translocase of inner mitochondrial membrane 10B
chr7	105290367	105292518	+	105290367	105290829	3pMXE	0.25	50	50	ENSMUST00000210350.2	ENSMUSG00000089847.9	Timm10b	chr7	protein_coding	translocase of inner mitochondrial membrane 10B
chr7	105290367	105300279	+	105290367	105290829	3pMXE	0.25	50	50	ENSMUST00000210350.2	ENSMUSG00000089847.9	Timm10b	chr7	protein_coding	translocase of inner mitochondrial membrane 10B
chr7	105290367	105304829	+	105290367	105290829	3pMXE	0.25	50	50	ENSMUST00000210350.2	ENSMUSG00000089847.9	Timm10b	chr7	protein_coding	translocase of inner mitochondrial membrane 10B
chr7	105289829	105290235	+	105289829	105289969	A3SS	0.33	50	50	ENSMUST00000151193.2	ENSMUSG00000089847.9	Timm10b	chr7	protein_coding	translocase of inner mitochondrial membrane 10B
chr7	105289829	105290235	+	105290064	105290235	A5SS&ES	0.33	50	50	ENSMUST00000150479.2	ENSMUSG00000089847.9	Timm10b	chr7	protein_coding	translocase of inner mitochondrial membrane 10B
chr7	105289829;105290075	105289969;105290235	+	105289829	105290235	cassetteExon	0.5	100	100	ENSMUST00000209588.2	ENSMUSG00000089847.9	Timm10b	chr7	protein_coding	translocase of inner mitochondrial membrane 10B
chr7	105289829;105290064	105290020;105290235	+	105289829	105290235	cassetteExon	0.5	100	100	ENSMUST00000209588.2	ENSMUSG00000089847.9	Timm10b	chr7	protein_coding	translocase of inner mitochondrial membrane 10B
chr7	105289829;105290075	105290020;105290235	+	105289829	105290235	cassetteExon	0.5	100	100	ENSMUST00000209588.2	ENSMUSG00000089847.9	Timm10b	chr7	protein_coding	translocase of inner mitochondrial membrane 10B
chr7	105290435	105300279	+	105290435	105292518	3pMXE	0.25	50	50	ENSMUST00000106780.2	ENSMUSG00000089847.9	Timm10b	chr7	protein_coding	translocase of inner mitochondrial membrane 10B
chr7	105290435	105304829	+	105290435	105292518	3pMXE	0.25	50	50	ENSMUST00000106780.2	ENSMUSG00000089847.9	Timm10b	chr7	protein_coding	translocase of inner mitochondrial membrane 10B
chr7	105290367	105292518	+	105290435	105292518	A5SS	0.5	50	50	ENSMUST00000106780.2	ENSMUSG00000089847.9	Timm10b	chr7	protein_coding	translocase of inner mitochondrial membrane 10B
chr7	105290367	105300279	+	105290367	105292518	3pMXE	0.25	50	50	ENSMUST00000209445.2	ENSMUSG00000089847.9	Timm10b	chr7	protein_coding	translocase of inner mitochondrial membrane 10B
chr7	105290367	105304829	+	105290367	105292518	3pMXE	0.25	50	50	ENSMUST00000209445.2	ENSMUSG00000089847.9	Timm10b	chr7	protein_coding	translocase of inner mitochondrial membrane 10B
chr7	105290367	105304829	+	105290367	105300279	3pMXE	0.25	50	50	ENSMUST00000106785.8	ENSMUSG00000110234.3	Gm45799	chr7	protein_coding	predicted gene 45799
chr7	105290435	105300279	+	105290367	105300279	A5SS	0.33	50	50	ENSMUST00000106785.8	ENSMUSG00000110234.3	Gm45799	chr7	protein_coding	predicted gene 45799
chr7	105300148	105300279	+	105290367	105300279	A5SS	0.33	50	50	ENSMUST00000106785.8	ENSMUSG00000110234.3	Gm45799	chr7	protein_coding	predicted gene 45799
chr7	105306491	105317653	+	105306491	105308118	3pMXE	0.5	50	50	ENSMUST00000142363.8	ENSMUSG00000110234.3	Gm45799	chr7	protein_coding	predicted gene 45799
chr7	105290367	105304829	+	105301513	105304829	A5SS&ES	0.33	50	50	ENSMUST00000142363.8	ENSMUSG00000110234.3	Gm45799	chr7	protein_coding	predicted gene 45799
chr7	105300148	105300279	+	105290435	105300279	A5SS	0.33	50	50	ENSMUST00000142363.8	ENSMUSG00000110234.3	Gm45799	chr7	protein_coding	predicted gene 45799
chr7	105317809	105322997	+	105317809	105323027	A3SS	0.5	50	50	ENSMUST00000142874.9	ENSMUSG00000110234.3	Gm45799	chr7	protein_coding	predicted gene 45799
chr7	105290435	105304829	+	105290367	105304829	A5SS	0.33	50	50	ENSMUST00000106786.8	ENSMUSG00000110234.3	Gm45799	chr7	protein_coding	predicted gene 45799
chr7	105290435	105304829	+	105290435	105300279	3pMXE	0.25	50	50	ENSMUST00000211054.2	ENSMUSG00000110234.3	Gm45799	chr7	protein_coding	predicted gene 45799
chr7	105301513	105304829	+	105290435	105304829	A5SS	0.33	50	50	ENSMUST00000210312.2	ENSMUSG00000110234.3	Gm45799	chr7	protein_coding	predicted gene 45799
chr7	105384263	105386272	-	105384263	105385505	5pMXE	0.33	50	50	ENSMUST00000033179.14	ENSMUSG00000030888.15	Rrp8	chr7	protein_coding	ribosomal RNA processing 8
chr7	105383104	105383198	-	105383104	105383207	A5SS	0.5	50	50	ENSMUST00000033179.14	ENSMUSG00000030888.15	Rrp8	chr7	protein_coding	ribosomal RNA processing 8
chr7	105384263	105385535	-	105384263	105385505	A5SS	0.33	50	50	ENSMUST00000033179.14	ENSMUSG00000030888.15	Rrp8	chr7	protein_coding	ribosomal RNA processing 8
chr7	105384263	105385535	-	105384263	105386272	A5SS	0.33	50	50	ENSMUST00000098148.6	ENSMUSG00000030888.15	Rrp8	chr7	protein_coding	ribosomal RNA processing 8
chr7	105389549	105389978	+	105389549;105389815	105389720;105389978	ES	0.5	50	50	ENSMUST00000033182.10	ENSMUSG00000030890.17	Ilk	chr7	protein_coding	integrin linked kinase
chr7	105386013	105386308	+	105385923	105386308	A5SS	0.5	50	50	ENSMUST00000033182.10	ENSMUSG00000030890.17	Ilk	chr7	protein_coding	integrin linked kinase
chr7	105390746	105390994	+	105390914	105390994	A5SS&ES	0.5	50	50	ENSMUST00000033182.10	ENSMUSG00000030890.17	Ilk	chr7	protein_coding	integrin linked kinase
chr7	105389549	105389978	+	105389549	105389720	A3SS	0.5	50	50	ENSMUST00000149695.8	ENSMUSG00000030890.17	Ilk	chr7	protein_coding	integrin linked kinase
chr7	105389549	105389978	+	105389815	105389978	5pMXE	0.5	50	50	ENSMUST00000153557.2	ENSMUSG00000030890.17	Ilk	chr7	protein_coding	integrin linked kinase
chr7	105399537	105401189	-	105399537;105400936	105400797;105401189	ES	0.5	50	50	ENSMUST00000033184.6	ENSMUSG00000030894.6	Tpp1	chr7	protein_coding	tripeptidyl peptidase I
chr7	105399645	105400797	-	105399537	105400797	A3SS	0.5	50	50	ENSMUST00000033184.6	ENSMUSG00000030894.6	Tpp1	chr7	protein_coding	tripeptidyl peptidase I
chr7	105400936	105401167	-	105400936	105401189	A5SS	0.5	50	50	ENSMUST00000033184.6	ENSMUSG00000030894.6	Tpp1	chr7	protein_coding	tripeptidyl peptidase I
chr7	105399537	105401189	-	105400936	105401189	A3SS	0.5	50	50	ENSMUST00000210840.2	ENSMUSG00000030894.6	Tpp1	chr7	protein_coding	tripeptidyl peptidase I
chr7	105399537	105401189	-	105399537	105400797	A5SS&ES	0.5	50	50	ENSMUST00000211659.2	ENSMUSG00000030894.6	Tpp1	chr7	protein_coding	tripeptidyl peptidase I
chr7	105459351	105459496	-	105459351	105459657	A5SS	0.33	50	50	ENSMUST00000124482.3	ENSMUSG00000030879.11	Mrpl17	chr7	protein_coding	mitochondrial ribosomal protein L17
chr7	105459351	105459591	-	105459351	105459657	A5SS	0.33	50	50	ENSMUST00000124482.3	ENSMUSG00000030879.11	Mrpl17	chr7	protein_coding	mitochondrial ribosomal protein L17
chr7	105459725	105460197	-	105459725	105460015	A5SS	0.5	50	50	ENSMUST00000124482.3	ENSMUSG00000030879.11	Mrpl17	chr7	protein_coding	mitochondrial ribosomal protein L17
chr7	105459351	105459591	-	105459351	105459496	A5SS	0.33	50	50	ENSMUST00000176158.2	ENSMUSG00000030879.11	Mrpl17	chr7	protein_coding	mitochondrial ribosomal protein L17
chr7	105553054;105563754	105563701;105603062	-	105553054	105603062	cassetteExon	0.5	100	100	ENSMUST00000106766.9	ENSMUSG00000078606.9	Gvin2	chr7	protein_coding	GTPase, very large interferon inducible, family member 2
chr7	105576497	105603062	-	105553054	105603062	A3SS	0.33	50	50	ENSMUST00000106766.9	ENSMUSG00000078606.9	Gvin2	chr7	protein_coding	GTPase, very large interferon inducible, family member 2
chr7	105553054	105562821	-	105553054	105603062	A5SS	0.33	50	50	ENSMUST00000106766.9	ENSMUSG00000078606.9	Gvin2	chr7	protein_coding	GTPase, very large interferon inducible, family member 2
chr7	105553054	105563701	-	105553054;105562960	105562821;105563701	ES	0.5	50	50	ENSMUST00000176467.8	ENSMUSG00000078606.9	Gvin2	chr7	protein_coding	GTPase, very large interferon inducible, family member 2
chr7	105576497	105603062	-	105563754	105603062	A3SS	0.33	50	50	ENSMUST00000176467.8	ENSMUSG00000078606.9	Gvin2	chr7	protein_coding	GTPase, very large interferon inducible, family member 2
chr7	105775167	105814432	-	105764471	105814432	A3SS	0.5	50	50	ENSMUST00000006667.11	ENSMUSG00000045868.13	Gvin1	chr7	protein_coding	GTPase, very large interferon inducible 1
chr7	105764471	105774234	-	105764471	105814432	A5SS	0.5	50	50	ENSMUST00000006667.11	ENSMUSG00000045868.13	Gvin1	chr7	protein_coding	GTPase, very large interferon inducible 1
chr7	106288956	106290360	-	106288956	106290249	5pMXE	0.33	50	50	ENSMUST00000216895.2	ENSMUSG00000064223.5	Olfr694	chr7	protein_coding	olfactory receptor 694
chr7	106288956	106290757	-	106288956	106290249	5pMXE	0.33	50	50	ENSMUST00000216895.2	ENSMUSG00000064223.5	Olfr694	chr7	protein_coding	olfactory receptor 694
chr7	106288956	106290360	-	106288956	106290757	A5SS	0.33	50	50	ENSMUST00000216118.3	ENSMUSG00000064223.5	Olfr694	chr7	protein_coding	olfactory receptor 694
chr7	106352611	106354097	-	106352611	106354102	A5SS	0.5	50	50	ENSMUST00000214306.2	ENSMUSG00000059087.5	Olfr698	chr7	protein_coding	olfactory receptor 698
chr7	106352496	106354097	-	106352611	106354097	A3SS	0.5	50	50	ENSMUST00000216255.2	ENSMUSG00000059087.5	Olfr698	chr7	protein_coding	olfactory receptor 698
chr7	106390947	106391991	-	106390423	106391991	A3SS	0.5	50	50	ENSMUST00000215952.2	ENSMUSG00000096714.3	Olfr699	chr7	protein_coding	olfactory receptor 699
chr7	106415362;106416216	106416140;106417270	+	106415362	106417270	cassetteExon	0.5	100	100	ENSMUST00000166880.3	ENSMUSG00000036744.14	Olfr701	chr7	protein_coding	olfactory receptor 701
chr7	106413423	106414155	+	106413428	106414155	A5SS	0.5	50	50	ENSMUST00000166880.3	ENSMUSG00000036744.14	Olfr701	chr7	protein_coding	olfactory receptor 701
chr7	106423751	106428076	-	106425997	106428076	A3SS&ES	0.5	50	50	ENSMUST00000219803.2	ENSMUSG00000056863.6	Olfr702	chr7	protein_coding	olfactory receptor 702
chr7	106462924	106466692	+	106462924	106464170	3pMXE	0.5	50	50	ENSMUST00000080925.7	ENSMUSG00000073900.6	Olfr704	chr7	protein_coding	olfactory receptor 704
chr7	106462924;106464553	106464170;106466692	+	106462924	106466692	cassetteExon	0.5	100	100	ENSMUST00000217204.3	ENSMUSG00000073900.6	Olfr704	chr7	protein_coding	olfactory receptor 704
chr7	106473647	106475585	-	106473563	106475585	A3SS	0.5	50	50	ENSMUST00000213721.2	ENSMUSG00000109058.4	Olfr705	chr7	protein_coding	olfactory receptor 705
chr7	106484036;106486044	106485658;106486672	-	106484036	106486672	cassetteExon	0.5	100	100	ENSMUST00000214495.2	ENSMUSG00000109354.3	Olfr706	chr7	protein_coding	olfactory receptor 706
chr7	106483174	106483994	-	106483210	106483994	A3SS	0.5	50	50	ENSMUST00000214495.2	ENSMUSG00000109354.3	Olfr706	chr7	protein_coding	olfactory receptor 706
chr7	106484036	106486672	-	106486044	106486672	A3SS	0.5	50	50	ENSMUST00000213918.2	ENSMUSG00000109354.3	Olfr706	chr7	protein_coding	olfactory receptor 706
chr7	106491330;106494689	106494650;106498426	-	106491330	106498426	cassetteExon	0.5	100	100	ENSMUST00000210644.3	ENSMUSG00000069390.6	Olfr707	chr7	protein_coding	olfactory receptor 707
chr7	106491330	106498508	-	106491330	106498426	A5SS	0.33	50	50	ENSMUST00000210644.3	ENSMUSG00000069390.6	Olfr707	chr7	protein_coding	olfactory receptor 707
chr7	106491330	106494650	-	106491330	106498508	A5SS	0.33	50	50	ENSMUST00000214112.2	ENSMUSG00000069390.6	Olfr707	chr7	protein_coding	olfactory receptor 707
chr7	106491330	106498426	-	106491330	106494650	A5SS&ES	0.33	50	50	ENSMUST00000213251.2	ENSMUSG00000069390.6	Olfr707	chr7	protein_coding	olfactory receptor 707
chr7	106494689	106498426	-	106494689	106500390	A5SS	0.5	50	50	ENSMUST00000213251.2	ENSMUSG00000069390.6	Olfr707	chr7	protein_coding	olfactory receptor 707
chr7	106507539	106513391	+	106507564	106513391	A5SS	0.5	50	50	ENSMUST00000215949.2	ENSMUSG00000073899.4	Olfr1532-ps1	chr7	protein_coding	olfactory receptor 1532, pseudogene 1
chr7	106556343;106558821	106558721;106560285	-	106556343	106560285	cassetteExon	0.5	100	100	ENSMUST00000213552.2	ENSMUSG00000036647.6	Olfr6	chr7	protein_coding	olfactory receptor 6
chr7	106556343	106560285	-	106558821	106560285	A3SS	0.5	50	50	ENSMUST00000040983.6	ENSMUSG00000036647.6	Olfr6	chr7	protein_coding	olfactory receptor 6
chr7	106571607	106574402	-	106571607;106573365	106573297;106574402	ES	0.5	50	50	ENSMUST00000051715.8	ENSMUSG00000045013.8	Olfr711	chr7	protein_coding	olfactory receptor 711
chr7	106571607	106574402	-	106573365	106574402	A3SS	0.5	50	50	ENSMUST00000216335.2	ENSMUSG00000045013.8	Olfr711	chr7	protein_coding	olfactory receptor 711
chr7	106595246	106605128	-	106595246;106601188	106600082;106605128	ES	0.33	50	50	ENSMUST00000207280.4	ENSMUSG00000070417.7	Olfr2	chr7	protein_coding	olfactory receptor 2
chr7	106601188;106604768	106604726;106605128	-	106601188	106605128	cassetteExon	0.5	100	100	ENSMUST00000207280.4	ENSMUSG00000070417.7	Olfr2	chr7	protein_coding	olfactory receptor 2
chr7	106601188	106601670	-	106601188	106605128	A5SS	0.33	50	50	ENSMUST00000207280.4	ENSMUSG00000070417.7	Olfr2	chr7	protein_coding	olfactory receptor 2
chr7	106601188	106605128	-	106595246	106605128	A3SS	0.33	50	50	ENSMUST00000217764.2	ENSMUSG00000070417.7	Olfr2	chr7	protein_coding	olfactory receptor 2
chr7	106604768	106605128	-	106595246	106605128	A3SS	0.33	50	50	ENSMUST00000217764.2	ENSMUSG00000070417.7	Olfr2	chr7	protein_coding	olfactory receptor 2
chr7	106595246	106600082	-	106595246	106605128	A5SS	0.5	50	50	ENSMUST00000217764.2	ENSMUSG00000070417.7	Olfr2	chr7	protein_coding	olfactory receptor 2
chr7	106601188;106601943	106601670;106604726	-	106601188	106604726	cassetteExon	0.5	100	100	ENSMUST00000211432.3	ENSMUSG00000070417.7	Olfr2	chr7	protein_coding	olfactory receptor 2
chr7	106604768	106604870	-	106604768	106605128	A5SS	0.5	50	50	ENSMUST00000211432.3	ENSMUSG00000070417.7	Olfr2	chr7	protein_coding	olfactory receptor 2
chr7	106601188	106604726	-	106601188	106601670	5pMXE	0.33	50	50	ENSMUST00000094109.3	ENSMUSG00000070417.7	Olfr2	chr7	protein_coding	olfactory receptor 2
chr7	106737734	106746505	+	106737734;106738311	106738212;106746505	ES	0.25	50	50	ENSMUST00000213367.3	ENSMUSG00000073896.6	Olfr716	chr7	protein_coding	olfactory receptor 716
chr7	106737734;106738408	106738379;106746505	+	106737734;106738311	106738212;106746505	MXE	0.5	100	100	ENSMUST00000213367.3	ENSMUSG00000073896.6	Olfr716	chr7	protein_coding	olfactory receptor 716
chr7	106740630	106746505	+	106738311	106746505	A5SS	0.25	50	50	ENSMUST00000213367.3	ENSMUSG00000073896.6	Olfr716	chr7	protein_coding	olfactory receptor 716
chr7	106737734;106738408	106738212;106746505	+	106737734	106746505	cassetteExon	0.5	100	100	ENSMUST00000214819.3	ENSMUSG00000073896.6	Olfr716	chr7	protein_coding	olfactory receptor 716
chr7	106737734;106738408	106738379;106746505	+	106737734	106746505	cassetteExon	0.5	100	100	ENSMUST00000214819.3	ENSMUSG00000073896.6	Olfr716	chr7	protein_coding	olfactory receptor 716
chr7	106740630	106746505	+	106737734	106746505	A5SS	0.25	50	50	ENSMUST00000214819.3	ENSMUSG00000073896.6	Olfr716	chr7	protein_coding	olfactory receptor 716
chr7	106737734	106746505	+	106738311	106746505	A5SS	0.25	50	50	ENSMUST00000216871.3	ENSMUSG00000073896.6	Olfr716	chr7	protein_coding	olfactory receptor 716
chr7	106738408	106746505	+	106738311	106746505	A5SS	0.25	50	50	ENSMUST00000216871.3	ENSMUSG00000073896.6	Olfr716	chr7	protein_coding	olfactory receptor 716
chr7	106740630	106746505	+	106738408	106746505	A5SS	0.25	50	50	ENSMUST00000215284.3	ENSMUSG00000073896.6	Olfr716	chr7	protein_coding	olfactory receptor 716
chr7	106786590	106789230	+	106785919	106789230	A5SS	0.5	50	50	ENSMUST00000084763.5	ENSMUSG00000016626.11	Nlrp14	chr7	protein_coding	NLR family, pyrin domain containing 14
chr7	106970354;107024605	107024254;107035482	+	106970354	107035482	cassetteExon	0.5	100	100	ENSMUST00000137663.2	ENSMUSG00000062542.12	Syt9	chr7	protein_coding	synaptotagmin IX
chr7	106970354	107035482	+	106970354	107024254	A3SS&ES	0.5	50	50	ENSMUST00000130414.8	ENSMUSG00000062542.12	Syt9	chr7	protein_coding	synaptotagmin IX
chr7	107024605	107035482	+	107024605	107101300	A3SS	0.5	50	50	ENSMUST00000130414.8	ENSMUSG00000062542.12	Syt9	chr7	protein_coding	synaptotagmin IX
chr7	107103540	107105701	+	107103540	107105696	A3SS	0.5	50	50	ENSMUST00000130414.8	ENSMUSG00000062542.12	Syt9	chr7	protein_coding	synaptotagmin IX
chr7	107036028	107101300	+	107024605	107101300	A5SS	0.5	50	50	ENSMUST00000130414.8	ENSMUSG00000062542.12	Syt9	chr7	protein_coding	synaptotagmin IX
chr7	107024605	107101300	+	107024605;107036028	107035482;107101300	ES	0.5	50	50	ENSMUST00000073459.12	ENSMUSG00000062542.12	Syt9	chr7	protein_coding	synaptotagmin IX
chr7	107194938	107236421	+	107194586	107236421	A5SS	0.33	50	50	ENSMUST00000207852.2	ENSMUSG00000036528.17	Ppfibp2	chr7	protein_coding	PTPRF interacting protein, binding protein 2 (liprin beta 2)
chr7	107206143	107236421	+	107194586	107236421	A5SS	0.33	50	50	ENSMUST00000207852.2	ENSMUSG00000036528.17	Ppfibp2	chr7	protein_coding	PTPRF interacting protein, binding protein 2 (liprin beta 2)
chr7	107326992	107328346	+	107326992;107327955	107327923;107328346	ES	0.5	50	50	ENSMUST00000040056.15	ENSMUSG00000036528.17	Ppfibp2	chr7	protein_coding	PTPRF interacting protein, binding protein 2 (liprin beta 2)
chr7	107296905;107304673	107304491;107307987	+	107296905	107307987	cassetteExon	0.5	100	100	ENSMUST00000040056.15	ENSMUSG00000036528.17	Ppfibp2	chr7	protein_coding	PTPRF interacting protein, binding protein 2 (liprin beta 2)
chr7	107264657	107280969	+	107252439	107280969	A5SS	0.5	50	50	ENSMUST00000040056.15	ENSMUSG00000036528.17	Ppfibp2	chr7	protein_coding	PTPRF interacting protein, binding protein 2 (liprin beta 2)
chr7	107206143	107236421	+	107194938	107236421	A5SS	0.33	50	50	ENSMUST00000208956.2	ENSMUSG00000036528.17	Ppfibp2	chr7	protein_coding	PTPRF interacting protein, binding protein 2 (liprin beta 2)
chr7	107343560	107346754	+	107343560;107345643	107345578;107346754	ES	0.5	50	50	ENSMUST00000098134.5	ENSMUSG00000036528.17	Ppfibp2	chr7	protein_coding	PTPRF interacting protein, binding protein 2 (liprin beta 2)
chr7	107352506	107353053	-	107352554	107353053	A3SS	0.5	50	50	ENSMUST00000052438.8	ENSMUSG00000048065.9	Cyb5r2	chr7	protein_coding	cytochrome b5 reductase 2
chr7	107381569	107385197	+	107381569;107381833	107381688;107385197	ES	0.5	50	50	ENSMUST00000207742.2	ENSMUSG00000109402.2	Gm45040	chr7	lncRNA	predicted gene 45040
chr7	107411553	107413773	+	107411553	107413776	A3SS	0.5	50	50	ENSMUST00000208563.3	ENSMUSG00000066242.4	Olfr467	chr7	protein_coding	olfactory receptor 467
chr7	107497336;107500784	107500683;107501908	+	107497336	107501908	cassetteExon	0.5	100	100	ENSMUST00000209670.4	ENSMUSG00000073893.7	Olfr472	chr7	protein_coding	olfactory receptor 472
chr7	107855372	107857499	-	107855372	107856325	5pMXE	0.5	50	50	ENSMUST00000211508.3	ENSMUSG00000096465.4	Olfr488	chr7	protein_coding	olfactory receptor 488
chr7	107912843;107915970	107915840;107916085	+	107912843	107916085	cassetteExon	0.5	100	100	ENSMUST00000214605.2	ENSMUSG00000094612.4	Olfr491	chr7	protein_coding	olfactory receptor 491
chr7	108246761	108250915	-	108246761;108247195	108247067;108250915	ES	0.33	50	50	ENSMUST00000213756.2	ENSMUSG00000049280.5	Olfr509	chr7	protein_coding	olfactory receptor 509
chr7	108247183	108250915	-	108247195	108250915	A3SS	0.33	50	50	ENSMUST00000213756.2	ENSMUSG00000049280.5	Olfr509	chr7	protein_coding	olfactory receptor 509
chr7	108246761;108247183	108247067;108250915	-	108246761	108250915	cassetteExon	0.5	100	100	ENSMUST00000215075.2	ENSMUSG00000049280.5	Olfr509	chr7	protein_coding	olfactory receptor 509
chr7	108265804	108266596	+	108265651	108266596	A5SS	0.33	50	50	ENSMUST00000213979.3	ENSMUSG00000096209.5	Olfr510	chr7	protein_coding	olfactory receptor 510
chr7	108266484	108266596	+	108265651	108266596	A5SS	0.33	50	50	ENSMUST00000213979.3	ENSMUSG00000096209.5	Olfr510	chr7	protein_coding	olfactory receptor 510
chr7	108265804	108266596	+	108265804;108266484	108266381;108266596	ES	0.5	50	50	ENSMUST00000216331.2	ENSMUSG00000096209.5	Olfr510	chr7	protein_coding	olfactory receptor 510
chr7	108445391	108449693	-	108445391	108449548	5pMXE	0.5	50	50	ENSMUST00000216092.2	ENSMUSG00000062434.3	Olfr516	chr7	protein_coding	olfactory receptor 516
chr7	108610345	108619724	+	108549978	108619724	A5SS	0.33	50	50	ENSMUST00000207583.2	ENSMUSG00000031028.15	Tub	chr7	protein_coding	tubby bipartite transcription factor
chr7	108617235	108619724	+	108549978	108619724	A5SS	0.33	50	50	ENSMUST00000207583.2	ENSMUSG00000031028.15	Tub	chr7	protein_coding	tubby bipartite transcription factor
chr7	108617235	108619724	+	108610345	108619724	A5SS	0.33	50	50	ENSMUST00000033341.12	ENSMUSG00000031028.15	Tub	chr7	protein_coding	tubby bipartite transcription factor
chr7	108647300	108653572	-	108647303	108653572	A3SS	0.5	50	50	ENSMUST00000147580.8	ENSMUSG00000048330.15	Ric3	chr7	protein_coding	RIC3 acetylcholine receptor chaperone
chr7	108656023	108656990	-	108656112	108656990	A3SS	0.5	50	50	ENSMUST00000147580.8	ENSMUSG00000048330.15	Ric3	chr7	protein_coding	RIC3 acetylcholine receptor chaperone
chr7	108680276	108682370	-	108657216	108682370	A3SS	0.5	50	50	ENSMUST00000055993.13	ENSMUSG00000048330.15	Ric3	chr7	protein_coding	RIC3 acetylcholine receptor chaperone
chr7	108742876	108774145	-	108742876	108769190	5pMXE	0.33	50	50	ENSMUST00000036992.9	ENSMUSG00000036111.9	Lmo1	chr7	protein_coding	LIM domain only 1
chr7	108742876	108769532	-	108742876	108769190	A5SS	0.33	50	50	ENSMUST00000036992.9	ENSMUSG00000036111.9	Lmo1	chr7	protein_coding	LIM domain only 1
chr7	108742876	108769532	-	108742876	108774145	A5SS	0.33	50	50	ENSMUST00000207178.2	ENSMUSG00000036111.9	Lmo1	chr7	protein_coding	LIM domain only 1
chr7	108940846	109038124	-	108940846	109037786	5pMXE	0.33	50	50	ENSMUST00000121748.8	ENSMUSG00000031027.16	Stk33	chr7	protein_coding	serine/threonine kinase 33
chr7	108940846	108952766	-	108940846	109037786	A5SS	0.33	50	50	ENSMUST00000121748.8	ENSMUSG00000031027.16	Stk33	chr7	protein_coding	serine/threonine kinase 33
chr7	108940846	109038124	-	108940846;108952959	108952766;109038124	ES	0.25	50	50	ENSMUST00000106745.9	ENSMUSG00000031027.16	Stk33	chr7	protein_coding	serine/threonine kinase 33
chr7	108937640	109038124	-	108911627	109038124	A3SS	0.25	50	50	ENSMUST00000141210.2	ENSMUSG00000031027.16	Stk33	chr7	protein_coding	serine/threonine kinase 33
chr7	108940846	109038124	-	108911627	109038124	A3SS	0.25	50	50	ENSMUST00000141210.2	ENSMUSG00000031027.16	Stk33	chr7	protein_coding	serine/threonine kinase 33
chr7	108952959	109038124	-	108911627	109038124	A3SS	0.25	50	50	ENSMUST00000141210.2	ENSMUSG00000031027.16	Stk33	chr7	protein_coding	serine/threonine kinase 33
chr7	108911627	108920004	-	108911627	109038124	A5SS	0.5	50	50	ENSMUST00000141210.2	ENSMUSG00000031027.16	Stk33	chr7	protein_coding	serine/threonine kinase 33
chr7	108940846	109038124	-	108937640	109038124	A3SS	0.25	50	50	ENSMUST00000121378.2	ENSMUSG00000031027.16	Stk33	chr7	protein_coding	serine/threonine kinase 33
chr7	108952959	109038124	-	108937640	109038124	A3SS	0.25	50	50	ENSMUST00000121378.2	ENSMUSG00000031027.16	Stk33	chr7	protein_coding	serine/threonine kinase 33
chr7	108937640	108939576	-	108937640	109038124	A5SS	0.5	50	50	ENSMUST00000121378.2	ENSMUSG00000031027.16	Stk33	chr7	protein_coding	serine/threonine kinase 33
chr7	109085357	109106948	-	109085357	109092514	5pMXE	0.33	50	50	ENSMUST00000106739.8	ENSMUSG00000031026.16	Trim66	chr7	protein_coding	tripartite motif-containing 66
chr7	109085357	109107011	-	109085357	109092514	5pMXE	0.33	50	50	ENSMUST00000106739.8	ENSMUSG00000031026.16	Trim66	chr7	protein_coding	tripartite motif-containing 66
chr7	109069398	109071441	-	109060221	109071441	A3SS	0.5	50	50	ENSMUST00000106739.8	ENSMUSG00000031026.16	Trim66	chr7	protein_coding	tripartite motif-containing 66
chr7	109053241	109054234	-	109053241	109054209	A5SS	0.5	50	50	ENSMUST00000106739.8	ENSMUSG00000031026.16	Trim66	chr7	protein_coding	tripartite motif-containing 66
chr7	109085357	109107011	-	109085357	109106948	A5SS	0.33	50	50	ENSMUST00000106741.10	ENSMUSG00000031026.16	Trim66	chr7	protein_coding	tripartite motif-containing 66
chr7	109118682	109118792	+	109118429	109118792	A5SS	0.5	50	50	ENSMUST00000143107.2	ENSMUSG00000046364.15	Rpl27a	chr7	protein_coding	ribosomal protein L27A
chr7	109152318	109169214	-	109152318;109156668	109155418;109169214	ES	0.5	50	50	ENSMUST00000079282.8	ENSMUSG00000031024.14	Denn2b	chr7	protein_coding	DENN domain containing 2B
chr7	109123737	109139599	-	109139053	109139599	A3SS&ES	0.5	50	50	ENSMUST00000079282.8	ENSMUSG00000031024.14	Denn2b	chr7	protein_coding	DENN domain containing 2B
chr7	109156668	109215505	-	109156668	109169214	A5SS&ES	0.5	50	50	ENSMUST00000079282.8	ENSMUSG00000031024.14	Denn2b	chr7	protein_coding	DENN domain containing 2B
chr7	109169318	109201762	-	109169318	109216265	A5SS	0.33	50	50	ENSMUST00000079282.8	ENSMUSG00000031024.14	Denn2b	chr7	protein_coding	DENN domain containing 2B
chr7	109169318	109215505	-	109169318	109216265	A5SS	0.33	50	50	ENSMUST00000079282.8	ENSMUSG00000031024.14	Denn2b	chr7	protein_coding	DENN domain containing 2B
chr7	109156668	109169214	-	109152318	109169214	A3SS	0.5	50	50	ENSMUST00000168005.8	ENSMUSG00000031024.14	Denn2b	chr7	protein_coding	DENN domain containing 2B
chr7	109152318	109155418	-	109152318	109169214	A5SS	0.5	50	50	ENSMUST00000168005.8	ENSMUSG00000031024.14	Denn2b	chr7	protein_coding	DENN domain containing 2B
chr7	109156668	109215505	-	109169318	109215505	A3SS&ES	0.5	50	50	ENSMUST00000084738.5	ENSMUSG00000031024.14	Denn2b	chr7	protein_coding	DENN domain containing 2B
chr7	109169318	109201762	-	109169318	109215505	A5SS	0.33	50	50	ENSMUST00000084738.5	ENSMUSG00000031024.14	Denn2b	chr7	protein_coding	DENN domain containing 2B
chr7	109156668	109215505	-	109156668;109169318	109169214;109215505	ES	0.5	50	50	ENSMUST00000077909.9	ENSMUSG00000031024.14	Denn2b	chr7	protein_coding	DENN domain containing 2B
chr7	109216354	109271127	-	109216354	109302745	A5SS	0.33	50	50	ENSMUST00000207745.2	ENSMUSG00000031024.14	Denn2b	chr7	protein_coding	DENN domain containing 2B
chr7	109216354	109271409	-	109216354	109302745	A5SS	0.33	50	50	ENSMUST00000207745.2	ENSMUSG00000031024.14	Denn2b	chr7	protein_coding	DENN domain containing 2B
chr7	109216354	109271127	-	109216354	109271409	A5SS	0.33	50	50	ENSMUST00000207394.2	ENSMUSG00000031024.14	Denn2b	chr7	protein_coding	DENN domain containing 2B
chr7	109303377	109304160	+	109303377	109304158	A3SS	0.5	50	50	ENSMUST00000033335.6	ENSMUSG00000031023.6	Akip1	chr7	protein_coding	A kinase (PRKA) interacting protein 1
chr7	109315694	109319738	-	109315694;109317366	109317132;109319738	ES	0.5	50	50	ENSMUST00000106735.9	ENSMUSG00000031022.16	BC051019	chr7	protein_coding	cDNA sequence BC051019
chr7	109322510	109323003	-	109322510	109322611	5pMXE	0.5	50	50	ENSMUST00000106735.9	ENSMUSG00000031022.16	BC051019	chr7	protein_coding	cDNA sequence BC051019
chr7	109319894	109320166	-	109319894	109322326	A5SS	0.5	50	50	ENSMUST00000106735.9	ENSMUSG00000031022.16	BC051019	chr7	protein_coding	cDNA sequence BC051019
chr7	109349311	109351804	-	109349311	109351278	5pMXE	0.5	50	50	ENSMUST00000033333.13	ENSMUSG00000031021.14	Tmem9b	chr7	protein_coding	TMEM9 domain family, member B
chr7	109349331	109351278	-	109349311	109351278	A3SS	0.5	50	50	ENSMUST00000033333.13	ENSMUSG00000031021.14	Tmem9b	chr7	protein_coding	TMEM9 domain family, member B
chr7	109365820	109380507	-	109365841	109380507	A3SS	0.5	50	50	ENSMUST00000041460.13	ENSMUSG00000034825.15	Nrip3	chr7	protein_coding	nuclear receptor interacting protein 3
chr7	109403967	109407616	-	109403967;109405447	109405250;109407616	ES	0.5	50	50	ENSMUST00000007423.12	ENSMUSG00000007279.15	Scube2	chr7	protein_coding	signal peptide, CUB domain, EGF-like 2
chr7	109408452	109423972	-	109408452;109409962	109409792;109423972	ES	0.33	50	50	ENSMUST00000007423.12	ENSMUSG00000007279.15	Scube2	chr7	protein_coding	signal peptide, CUB domain, EGF-like 2
chr7	109428346;109430087	109430004;109430335	-	109428346	109430335	cassetteExon	0.5	100	100	ENSMUST00000007423.12	ENSMUSG00000007279.15	Scube2	chr7	protein_coding	signal peptide, CUB domain, EGF-like 2
chr7	109409958	109423972	-	109409962	109423972	A3SS	0.33	50	50	ENSMUST00000007423.12	ENSMUSG00000007279.15	Scube2	chr7	protein_coding	signal peptide, CUB domain, EGF-like 2
chr7	109405447	109407118	-	109405447	109407616	A5SS	0.5	50	50	ENSMUST00000007423.12	ENSMUSG00000007279.15	Scube2	chr7	protein_coding	signal peptide, CUB domain, EGF-like 2
chr7	109437403	109440051	-	109437403	109442387	A5SS	0.5	50	50	ENSMUST00000007423.12	ENSMUSG00000007279.15	Scube2	chr7	protein_coding	signal peptide, CUB domain, EGF-like 2
chr7	109408452;109409958	109409792;109423972	-	109408452	109423972	cassetteExon	0.5	100	100	ENSMUST00000106729.8	ENSMUSG00000007279.15	Scube2	chr7	protein_coding	signal peptide, CUB domain, EGF-like 2
chr7	109430451	109430874	-	109424178	109430874	A3SS	0.5	50	50	ENSMUST00000106728.3	ENSMUSG00000007279.15	Scube2	chr7	protein_coding	signal peptide, CUB domain, EGF-like 2
chr7	109424178	109424526	-	109424178	109430874	A5SS	0.5	50	50	ENSMUST00000106728.3	ENSMUSG00000007279.15	Scube2	chr7	protein_coding	signal peptide, CUB domain, EGF-like 2
chr7	109534009;109534760	109534689;109559281	-	109534009	109559281	cassetteExon	0.5	100	100	ENSMUST00000106722.2	ENSMUSG00000035901.15	Dennd5a	chr7	protein_coding	DENN/MADD domain containing 5A
chr7	109520718	109524053	-	109520718	109526034	A5SS	0.5	50	50	ENSMUST00000106722.2	ENSMUSG00000035901.15	Dennd5a	chr7	protein_coding	DENN/MADD domain containing 5A
chr7	109534760	109559484	-	109534760	109559281	A5SS	0.5	50	50	ENSMUST00000080437.13	ENSMUSG00000035901.15	Dennd5a	chr7	protein_coding	DENN/MADD domain containing 5A
chr7	109534009	109559281	-	109534009	109534689	A5SS&ES	0.5	50	50	ENSMUST00000151923.2	ENSMUSG00000035901.15	Dennd5a	chr7	protein_coding	DENN/MADD domain containing 5A
chr7	109580324	109585169	-	109580324;109581980	109581863;109585169	ES	0.5	50	50	ENSMUST00000094097.12	ENSMUSG00000047554.15	Tmem41b	chr7	protein_coding	transmembrane protein 41B
chr7	109578696	109580196	-	109578689	109580196	A3SS	0.5	50	50	ENSMUST00000094097.12	ENSMUSG00000047554.15	Tmem41b	chr7	protein_coding	transmembrane protein 41B
chr7	109578021;109581980	109581863;109585169	-	109578021;109580324	109578596;109585169	MXE	0.5	100	100	ENSMUST00000154831.9	ENSMUSG00000047554.15	Tmem41b	chr7	protein_coding	transmembrane protein 41B
chr7	109580324	109581863	-	109578021	109581863	A3SS	0.5	50	50	ENSMUST00000124821.9	ENSMUSG00000047554.15	Tmem41b	chr7	protein_coding	transmembrane protein 41B
chr7	109580324	109585169	-	109581980	109585169	A3SS&ES	0.5	50	50	ENSMUST00000124821.9	ENSMUSG00000047554.15	Tmem41b	chr7	protein_coding	transmembrane protein 41B
chr7	109578021	109578596	-	109578021	109581863	A5SS	0.5	50	50	ENSMUST00000124821.9	ENSMUSG00000047554.15	Tmem41b	chr7	protein_coding	transmembrane protein 41B
chr7	109602922	109746835	-	109602922	109605765	5pMXE	0.5	50	50	ENSMUST00000191157.7	ENSMUSG00000101585.7	1600010M07Rik	chr7	lncRNA	RIKEN cDNA 1600010M07 gene
chr7	109600462	109602793	-	109597980	109602793	A3SS	0.5	50	50	ENSMUST00000191157.7	ENSMUSG00000101585.7	1600010M07Rik	chr7	lncRNA	RIKEN cDNA 1600010M07 gene
chr7	109597980	109598157	-	109597980	109602793	A5SS	0.5	50	50	ENSMUST00000191157.7	ENSMUSG00000101585.7	1600010M07Rik	chr7	lncRNA	RIKEN cDNA 1600010M07 gene
chr7	109641322	109642036	+	109641322	109641993	A3SS	0.5	50	50	ENSMUST00000084731.5	ENSMUSG00000066232.5	Ipo7	chr7	protein_coding	importin 7
chr7	109643692	109650681	+	109643692	109643825	A3SS&ES	0.5	50	50	ENSMUST00000084731.5	ENSMUSG00000066232.5	Ipo7	chr7	protein_coding	importin 7
chr7	109626355	109642036	+	109641322	109642036	A5SS&ES	0.5	50	50	ENSMUST00000208821.2	ENSMUSG00000066232.5	Ipo7	chr7	protein_coding	importin 7
chr7	109670662	109673275	+	109670662;109671409	109671329;109673275	ES	0.5	50	50	ENSMUST00000209505.2	ENSMUSG00000061079.15	Zfp143	chr7	protein_coding	zinc finger protein 143
chr7	109670662	109671326	+	109670662	109671329	A3SS	0.33	50	50	ENSMUST00000209505.2	ENSMUSG00000061079.15	Zfp143	chr7	protein_coding	zinc finger protein 143
chr7	109660982	109668691	+	109660761	109668691	A5SS	0.5	50	50	ENSMUST00000209505.2	ENSMUSG00000061079.15	Zfp143	chr7	protein_coding	zinc finger protein 143
chr7	109670662	109673275	+	109670662;109671409	109671326;109673275	ES	0.5	50	50	ENSMUST00000084727.11	ENSMUSG00000061079.15	Zfp143	chr7	protein_coding	zinc finger protein 143
chr7	110038145	110040659	-	110038145;110040285	110040157;110040659	ES	0.5	50	50	ENSMUST00000164759.8	ENSMUSG00000038371.16	Sbf2	chr7	protein_coding	SET binding factor 2
chr7	110041574	110049102	-	110041574;110046334	110046221;110049102	ES	0.5	50	50	ENSMUST00000164759.8	ENSMUSG00000038371.16	Sbf2	chr7	protein_coding	SET binding factor 2
chr7	110063914	110159465	-	110063914;110088565	110088428;110159465	ES	0.33	50	50	ENSMUST00000164759.8	ENSMUSG00000038371.16	Sbf2	chr7	protein_coding	SET binding factor 2
chr7	110088565	110213914	-	110088565;110159553	110159465;110213914	ES	0.33	50	50	ENSMUST00000164759.8	ENSMUSG00000038371.16	Sbf2	chr7	protein_coding	SET binding factor 2
chr7	109939281;109940571	109940497;109948062	-	109939281	109948062	cassetteExon	0.5	100	100	ENSMUST00000164759.8	ENSMUSG00000038371.16	Sbf2	chr7	protein_coding	SET binding factor 2
chr7	109939281;109947189	109947094;109948062	-	109939281	109948062	cassetteExon	0.5	100	100	ENSMUST00000164759.8	ENSMUSG00000038371.16	Sbf2	chr7	protein_coding	SET binding factor 2
chr7	110088565;110107637	110107576;110159465	-	110088565	110159465	cassetteExon	0.5	100	100	ENSMUST00000164759.8	ENSMUSG00000038371.16	Sbf2	chr7	protein_coding	SET binding factor 2
chr7	110159550	110213914	-	110159553	110213914	A3SS	0.33	50	50	ENSMUST00000164759.8	ENSMUSG00000038371.16	Sbf2	chr7	protein_coding	SET binding factor 2
chr7	109939281;109947189	109947094;109948062	-	109939281;109940571	109940497;109948062	MXE	0.5	100	100	ENSMUST00000033058.14	ENSMUSG00000038371.16	Sbf2	chr7	protein_coding	SET binding factor 2
chr7	109940571;109947189	109947094;109948062	-	109940571	109948062	cassetteExon	0.5	100	100	ENSMUST00000033058.14	ENSMUSG00000038371.16	Sbf2	chr7	protein_coding	SET binding factor 2
chr7	110063914;110088565	110088428;110213914	-	110063914;110159553	110159465;110213914	MXE	0.5	100	100	ENSMUST00000166020.8	ENSMUSG00000038371.16	Sbf2	chr7	protein_coding	SET binding factor 2
chr7	110107637	110159465	-	110063914	110159465	A3SS	0.33	50	50	ENSMUST00000166020.8	ENSMUSG00000038371.16	Sbf2	chr7	protein_coding	SET binding factor 2
chr7	109939281;109940571	109940497;109947094	-	109939281	109947094	cassetteExon	0.5	100	100	ENSMUST00000164599.8	ENSMUSG00000038371.16	Sbf2	chr7	protein_coding	SET binding factor 2
chr7	109939281	109947094	-	109940571	109947094	3pMXE	0.5	50	50	ENSMUST00000164525.2	ENSMUSG00000038371.16	Sbf2	chr7	protein_coding	SET binding factor 2
chr7	110088565	110213914	-	110088565;110159550	110159465;110213914	ES	0.33	50	50	ENSMUST00000167880.8	ENSMUSG00000038371.16	Sbf2	chr7	protein_coding	SET binding factor 2
chr7	110063914;110159550	110159465;110213914	-	110063914;110088565	110088428;110213914	MXE	0.5	100	100	ENSMUST00000167652.2	ENSMUSG00000038371.16	Sbf2	chr7	protein_coding	SET binding factor 2
chr7	110088565	110107576	-	110088565	110213914	A5SS	0.33	50	50	ENSMUST00000167652.2	ENSMUSG00000038371.16	Sbf2	chr7	protein_coding	SET binding factor 2
chr7	110377231	110390395	+	110377231;110388021	110387817;110390395	ES	0.5	50	50	ENSMUST00000170374.8	ENSMUSG00000005686.18	Ampd3	chr7	protein_coding	adenosine monophosphate deaminase 3
chr7	110368139	110377006	+	110367586	110377006	A5SS	0.2	50	50	ENSMUST00000170374.8	ENSMUSG00000005686.18	Ampd3	chr7	protein_coding	adenosine monophosphate deaminase 3
chr7	110372103	110377006	+	110367586	110377006	A5SS	0.2	50	50	ENSMUST00000170374.8	ENSMUSG00000005686.18	Ampd3	chr7	protein_coding	adenosine monophosphate deaminase 3
chr7	110373187	110377006	+	110367586	110377006	A5SS	0.2	50	50	ENSMUST00000170374.8	ENSMUSG00000005686.18	Ampd3	chr7	protein_coding	adenosine monophosphate deaminase 3
chr7	110373520	110377006	+	110367586	110377006	A5SS	0.2	50	50	ENSMUST00000170374.8	ENSMUSG00000005686.18	Ampd3	chr7	protein_coding	adenosine monophosphate deaminase 3
chr7	110372103	110377006	+	110368139	110377006	A5SS	0.2	50	50	ENSMUST00000213373.2	ENSMUSG00000005686.18	Ampd3	chr7	protein_coding	adenosine monophosphate deaminase 3
chr7	110373187	110377006	+	110368139	110377006	A5SS	0.2	50	50	ENSMUST00000213373.2	ENSMUSG00000005686.18	Ampd3	chr7	protein_coding	adenosine monophosphate deaminase 3
chr7	110373520	110377006	+	110368139	110377006	A5SS	0.2	50	50	ENSMUST00000213373.2	ENSMUSG00000005686.18	Ampd3	chr7	protein_coding	adenosine monophosphate deaminase 3
chr7	110373187	110377006	+	110372103	110377006	A5SS	0.2	50	50	ENSMUST00000005829.13	ENSMUSG00000005686.18	Ampd3	chr7	protein_coding	adenosine monophosphate deaminase 3
chr7	110373520	110377006	+	110372103	110377006	A5SS	0.2	50	50	ENSMUST00000005829.13	ENSMUSG00000005686.18	Ampd3	chr7	protein_coding	adenosine monophosphate deaminase 3
chr7	110377231	110390395	+	110377231	110387817	3pMXE	0.5	50	50	ENSMUST00000143786.2	ENSMUSG00000005686.18	Ampd3	chr7	protein_coding	adenosine monophosphate deaminase 3
chr7	110373520	110377006	+	110373187	110377006	A5SS	0.2	50	50	ENSMUST00000143786.2	ENSMUSG00000005686.18	Ampd3	chr7	protein_coding	adenosine monophosphate deaminase 3
chr7	110415191	110420461	-	110400758	110420461	A3SS	0.25	50	50	ENSMUST00000176210.2	ENSMUSG00000030788.17	Rnf141	chr7	protein_coding	ring finger protein 141
chr7	110416054	110420461	-	110400758	110420461	A3SS	0.25	50	50	ENSMUST00000176210.2	ENSMUSG00000030788.17	Rnf141	chr7	protein_coding	ring finger protein 141
chr7	110416057	110420461	-	110400758	110420461	A3SS	0.25	50	50	ENSMUST00000176210.2	ENSMUSG00000030788.17	Rnf141	chr7	protein_coding	ring finger protein 141
chr7	110433052	110443546	-	110433052;110436477	110436284;110443546	ES	0.5	50	50	ENSMUST00000177236.8	ENSMUSG00000030788.17	Rnf141	chr7	protein_coding	ring finger protein 141
chr7	110415191	110420461	-	110416057	110420461	A3SS	0.25	50	50	ENSMUST00000177236.8	ENSMUSG00000030788.17	Rnf141	chr7	protein_coding	ring finger protein 141
chr7	110416054	110420461	-	110416057	110420461	A3SS	0.25	50	50	ENSMUST00000177236.8	ENSMUSG00000030788.17	Rnf141	chr7	protein_coding	ring finger protein 141
chr7	110430168	110432944	-	110424605	110432944	A3SS	0.5	50	50	ENSMUST00000177236.8	ENSMUSG00000030788.17	Rnf141	chr7	protein_coding	ring finger protein 141
chr7	110433052	110436370	-	110433052	110436284	A5SS	0.33	50	50	ENSMUST00000177236.8	ENSMUSG00000030788.17	Rnf141	chr7	protein_coding	ring finger protein 141
chr7	110436477	110436616	-	110436477	110443546	A5SS	0.25	50	50	ENSMUST00000177236.8	ENSMUSG00000030788.17	Rnf141	chr7	protein_coding	ring finger protein 141
chr7	110436477	110443006	-	110436477	110443546	A5SS	0.25	50	50	ENSMUST00000177236.8	ENSMUSG00000030788.17	Rnf141	chr7	protein_coding	ring finger protein 141
chr7	110436477	110443224	-	110436477	110443546	A5SS	0.25	50	50	ENSMUST00000177236.8	ENSMUSG00000030788.17	Rnf141	chr7	protein_coding	ring finger protein 141
chr7	110436477	110443006	-	110436477	110436616	5pMXE	0.25	50	50	ENSMUST00000175981.8	ENSMUSG00000030788.17	Rnf141	chr7	protein_coding	ring finger protein 141
chr7	110436477	110443224	-	110436477	110436616	5pMXE	0.25	50	50	ENSMUST00000175981.8	ENSMUSG00000030788.17	Rnf141	chr7	protein_coding	ring finger protein 141
chr7	110416054	110420461	-	110415191	110420461	A3SS	0.33	50	50	ENSMUST00000177462.8	ENSMUSG00000030788.17	Rnf141	chr7	protein_coding	ring finger protein 141
chr7	110436477	110443224	-	110436477	110443006	A5SS	0.25	50	50	ENSMUST00000106682.10	ENSMUSG00000030788.17	Rnf141	chr7	protein_coding	ring finger protein 141
chr7	110433052;110436477	110436370;110443546	-	110433052	110443546	cassetteExon	0.5	100	100	ENSMUST00000176746.8	ENSMUSG00000030788.17	Rnf141	chr7	protein_coding	ring finger protein 141
chr7	110523794;110524539	110524462;110525550	-	110523794	110525550	cassetteExon	0.5	100	100	ENSMUST00000127935.8	ENSMUSG00000005611.16	Irag1	chr7	protein_coding	inositol 1,4,5-triphosphate receptor associated 1
chr7	110519261	110520521	-	110504757	110520521	A3SS	0.5	50	50	ENSMUST00000127935.8	ENSMUSG00000005611.16	Irag1	chr7	protein_coding	inositol 1,4,5-triphosphate receptor associated 1
chr7	110528769	110545040	-	110528785	110545040	A3SS	0.5	50	50	ENSMUST00000005751.13	ENSMUSG00000005611.16	Irag1	chr7	protein_coding	inositol 1,4,5-triphosphate receptor associated 1
chr7	110545188	110581298	-	110545188	110581220	A5SS	0.5	50	50	ENSMUST00000005751.13	ENSMUSG00000005611.16	Irag1	chr7	protein_coding	inositol 1,4,5-triphosphate receptor associated 1
chr7	110650803	110651421	+	110650803	110651509	A3SS	0.5	50	50	ENSMUST00000005749.6	ENSMUSG00000005609.17	Ctr9	chr7	protein_coding	CTR9 homolog, Paf1/RNA polymerase II complex component
chr7	110674919	110675903	-	110674919;110675600	110675487;110675903	ES	0.5	50	50	ENSMUST00000162415.9	ENSMUSG00000005610.18	Eif4g2	chr7	protein_coding	eukaryotic translation initiation factor 4, gamma 2
chr7	110680778	110681992	-	110680840	110681992	A3SS	0.5	50	50	ENSMUST00000162415.9	ENSMUSG00000005610.18	Eif4g2	chr7	protein_coding	eukaryotic translation initiation factor 4, gamma 2
chr7	110671964	110672319	-	110671964	110673036	A5SS	0.5	50	50	ENSMUST00000162415.9	ENSMUSG00000005610.18	Eif4g2	chr7	protein_coding	eukaryotic translation initiation factor 4, gamma 2
chr7	110674919	110675156	-	110674919	110675487	A5SS	0.33	50	50	ENSMUST00000162415.9	ENSMUSG00000005610.18	Eif4g2	chr7	protein_coding	eukaryotic translation initiation factor 4, gamma 2
chr7	110680840	110681235	-	110680840	110681992	A5SS	0.5	50	50	ENSMUST00000162415.9	ENSMUSG00000005610.18	Eif4g2	chr7	protein_coding	eukaryotic translation initiation factor 4, gamma 2
chr7	110674919;110675600	110675156;110675903	-	110674919	110675903	cassetteExon	0.5	100	100	ENSMUST00000161051.8	ENSMUSG00000005610.18	Eif4g2	chr7	protein_coding	eukaryotic translation initiation factor 4, gamma 2
chr7	110674919	110675903	-	110674919	110675156	5pMXE	0.33	50	50	ENSMUST00000161790.2	ENSMUSG00000005610.18	Eif4g2	chr7	protein_coding	eukaryotic translation initiation factor 4, gamma 2
chr7	110717096	110720115	-	110682729	110720115	A3SS	0.33	50	50	ENSMUST00000209597.2	ENSMUSG00000110424.2	1700012D14Rik	chr7	lncRNA	RIKEN cDNA 1700012D14 gene
chr7	110717099	110720115	-	110682729	110720115	A3SS	0.33	50	50	ENSMUST00000209597.2	ENSMUSG00000110424.2	1700012D14Rik	chr7	lncRNA	RIKEN cDNA 1700012D14 gene
chr7	110720230	110721590	-	110720230	110721715	A5SS	0.5	50	50	ENSMUST00000209597.2	ENSMUSG00000110424.2	1700012D14Rik	chr7	lncRNA	RIKEN cDNA 1700012D14 gene
chr7	110717099	110720115	-	110717096	110720115	A3SS	0.33	50	50	ENSMUST00000210788.2	ENSMUSG00000110424.2	1700012D14Rik	chr7	lncRNA	RIKEN cDNA 1700012D14 gene
chr7	111119382	111147883	-	111119382	111147838	A5SS	0.5	50	50	ENSMUST00000049430.15	ENSMUSG00000038296.15	Galnt18	chr7	protein_coding	polypeptide N-acetylgalactosaminyltransferase 18
chr7	111622953;111646193	111646134;111652424	+	111622953	111652424	cassetteExon	0.5	100	100	ENSMUST00000106653.4	ENSMUSG00000059263.10	Usp47	chr7	protein_coding	ubiquitin specific peptidase 47
chr7	111677166;111679438	111679379;111681637	+	111677166	111681637	cassetteExon	0.5	100	100	ENSMUST00000106653.4	ENSMUSG00000059263.10	Usp47	chr7	protein_coding	ubiquitin specific peptidase 47
chr7	111931246;111944560	111944453;111945929	+	111931246	111945929	cassetteExon	0.5	100	100	ENSMUST00000050149.12	ENSMUSG00000038244.15	Mical2	chr7	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 2
chr7	111931246	111933036	+	111931246	111945929	A3SS	0.33	50	50	ENSMUST00000050149.12	ENSMUSG00000038244.15	Mical2	chr7	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 2
chr7	111950634	111964170	+	111950634	111953106	3pMXE	0.5	50	50	ENSMUST00000037991.12	ENSMUSG00000038244.15	Mical2	chr7	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 2
chr7	111931246	111933036	+	111931246	111944453	A3SS	0.33	50	50	ENSMUST00000150428.2	ENSMUSG00000038244.15	Mical2	chr7	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 2
chr7	111936181	111944453	+	111931246	111944453	A5SS	0.5	50	50	ENSMUST00000150428.2	ENSMUSG00000038244.15	Mical2	chr7	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 2
chr7	111953161	111964170	+	111953161	111954154	3pMXE	0.5	50	50	ENSMUST00000144509.2	ENSMUSG00000038244.15	Mical2	chr7	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 2
chr7	111950634	111964170	+	111950634;111953161	111953106;111964170	ES	0.5	50	50	ENSMUST00000215412.2	ENSMUSG00000038244.15	Mical2	chr7	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 2
chr7	111994081	111994289	+	111994081	111996679	A3SS	0.5	50	50	ENSMUST00000215412.2	ENSMUSG00000038244.15	Mical2	chr7	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 2
chr7	111996772	112006764	+	111996772	112006767	A3SS	0.5	50	50	ENSMUST00000215412.2	ENSMUSG00000038244.15	Mical2	chr7	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 2
chr7	111973860	111975222	+	111967665	111975222	A5SS	0.33	50	50	ENSMUST00000215412.2	ENSMUSG00000038244.15	Mical2	chr7	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 2
chr7	111974139	111975222	+	111967665	111975222	A5SS	0.33	50	50	ENSMUST00000215412.2	ENSMUSG00000038244.15	Mical2	chr7	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 2
chr7	111974139	111975222	+	111973860	111975222	A5SS	0.33	50	50	ENSMUST00000033033.11	ENSMUSG00000038244.15	Mical2	chr7	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 2
chr7	112027307;112100476	112100384;112143384	+	112027307	112143384	cassetteExon	0.5	100	100	ENSMUST00000106643.8	ENSMUSG00000030770.16	Parva	chr7	protein_coding	parvin, alpha
chr7	112119035	112143384	+	112027307	112143384	A5SS	0.33	50	50	ENSMUST00000106643.8	ENSMUSG00000030770.16	Parva	chr7	protein_coding	parvin, alpha
chr7	112168596	112172078	+	112167085	112172078	A5SS	0.5	50	50	ENSMUST00000106643.8	ENSMUSG00000030770.16	Parva	chr7	protein_coding	parvin, alpha
chr7	112119035	112143384	+	112100476	112143384	A5SS	0.33	50	50	ENSMUST00000139720.8	ENSMUSG00000030770.16	Parva	chr7	protein_coding	parvin, alpha
chr7	112267107	112277056	-	112217874	112277056	A3SS	0.5	50	50	ENSMUST00000146145.4	ENSMUSG00000085945.4	2310014F06Rik	chr7	lncRNA	RIKEN cDNA 2310014F06 gene
chr7	112438687	112456005	+	112438687;112441309	112441247;112456005	ES	0.33	50	50	ENSMUST00000084705.13	ENSMUSG00000055320.19	Tead1	chr7	protein_coding	TEA domain family member 1
chr7	112460763	112490926	+	112460763;112475455	112475282;112490926	ES	0.5	50	50	ENSMUST00000084705.13	ENSMUSG00000055320.19	Tead1	chr7	protein_coding	TEA domain family member 1
chr7	112438687;112441157	112441095;112441247	+	112438687	112441247	cassetteExon	0.5	100	100	ENSMUST00000084705.13	ENSMUSG00000055320.19	Tead1	chr7	protein_coding	TEA domain family member 1
chr7	112438687;112455271	112455260;112456005	+	112438687;112441309	112441247;112456005	MXE	0.5	100	100	ENSMUST00000084705.13	ENSMUSG00000055320.19	Tead1	chr7	protein_coding	TEA domain family member 1
chr7	112441309;112455271	112455260;112456005	+	112441309	112456005	cassetteExon	0.5	100	100	ENSMUST00000084705.13	ENSMUSG00000055320.19	Tead1	chr7	protein_coding	TEA domain family member 1
chr7	112358846	112405872	+	112358846	112438623	A3SS	0.5	50	50	ENSMUST00000084705.13	ENSMUSG00000055320.19	Tead1	chr7	protein_coding	TEA domain family member 1
chr7	112293022	112358591	+	112278933	112358591	A5SS	0.33	50	50	ENSMUST00000084705.13	ENSMUSG00000055320.19	Tead1	chr7	protein_coding	TEA domain family member 1
chr7	112341336	112358591	+	112278933	112358591	A5SS	0.33	50	50	ENSMUST00000084705.13	ENSMUSG00000055320.19	Tead1	chr7	protein_coding	TEA domain family member 1
chr7	112441157	112455260	+	112441157;112441309	112441247;112455260	ES	0.33	50	50	ENSMUST00000239442.2	ENSMUSG00000055320.19	Tead1	chr7	protein_coding	TEA domain family member 1
chr7	112438687	112455260	+	112438687;112441309	112441247;112455260	ES	0.33	50	50	ENSMUST00000239404.2	ENSMUSG00000055320.19	Tead1	chr7	protein_coding	TEA domain family member 1
chr7	112438687;112441157	112441095;112455260	+	112438687;112441309	112441247;112455260	MXE	0.5	100	100	ENSMUST00000239404.2	ENSMUSG00000055320.19	Tead1	chr7	protein_coding	TEA domain family member 1
chr7	112438687	112455260	+	112438687	112441247	3pMXE	0.25	50	50	ENSMUST00000172065.8	ENSMUSG00000055320.19	Tead1	chr7	protein_coding	TEA domain family member 1
chr7	112438687	112456005	+	112438687	112441247	3pMXE	0.25	50	50	ENSMUST00000172065.8	ENSMUSG00000055320.19	Tead1	chr7	protein_coding	TEA domain family member 1
chr7	112341336	112358591	+	112293022	112358591	A5SS	0.5	50	50	ENSMUST00000171373.3	ENSMUSG00000055320.19	Tead1	chr7	protein_coding	TEA domain family member 1
chr7	112438687;112441309	112441095;112456005	+	112438687	112456005	cassetteExon	0.5	100	100	ENSMUST00000170352.9	ENSMUSG00000055320.19	Tead1	chr7	protein_coding	TEA domain family member 1
chr7	112438687;112455271	112455260;112456005	+	112438687	112456005	cassetteExon	0.5	100	100	ENSMUST00000170352.9	ENSMUSG00000055320.19	Tead1	chr7	protein_coding	TEA domain family member 1
chr7	112438687;112441157	112441095;112455260	+	112438687	112455260	cassetteExon	0.5	100	100	ENSMUST00000168981.8	ENSMUSG00000055320.19	Tead1	chr7	protein_coding	TEA domain family member 1
chr7	112438687;112441309	112441095;112455260	+	112438687	112455260	cassetteExon	0.5	100	100	ENSMUST00000168981.8	ENSMUSG00000055320.19	Tead1	chr7	protein_coding	TEA domain family member 1
chr7	112438687;112441309	112441095;112456005	+	112438687;112455271	112455260;112456005	MXE	0.5	100	100	ENSMUST00000168981.8	ENSMUSG00000055320.19	Tead1	chr7	protein_coding	TEA domain family member 1
chr7	112438687;112441309	112441247;112456005	+	112438687;112455271	112441095;112456005	MXE	0.5	100	100	ENSMUST00000165036.8	ENSMUSG00000055320.19	Tead1	chr7	protein_coding	TEA domain family member 1
chr7	112441157;112441309	112441247;112456005	+	112441157;112455271	112455260;112456005	MXE	0.5	100	100	ENSMUST00000165036.8	ENSMUSG00000055320.19	Tead1	chr7	protein_coding	TEA domain family member 1
chr7	112438687	112455260	+	112438687	112441095	3pMXE	0.25	50	50	ENSMUST00000168328.2	ENSMUSG00000055320.19	Tead1	chr7	protein_coding	TEA domain family member 1
chr7	112438687	112456005	+	112438687	112441095	3pMXE	0.25	50	50	ENSMUST00000168328.2	ENSMUSG00000055320.19	Tead1	chr7	protein_coding	TEA domain family member 1
chr7	112438687	112441247	+	112438687	112441095	A3SS	0.25	50	50	ENSMUST00000168328.2	ENSMUSG00000055320.19	Tead1	chr7	protein_coding	TEA domain family member 1
chr7	112701284;112701956	112701859;112711955	-	112701284	112711955	cassetteExon	0.5	100	100	ENSMUST00000209589.2	ENSMUSG00000110009.2	4930543E12Rik	chr7	lncRNA	RIKEN cDNA 4930543E12 gene
chr7	112740196	112741026	-	112740196	112741204	A5SS	0.5	50	50	ENSMUST00000209589.2	ENSMUSG00000110009.2	4930543E12Rik	chr7	lncRNA	RIKEN cDNA 4930543E12 gene
chr7	112880009	112882728	+	112880009;112882502	112882464;112882728	ES	0.5	50	50	ENSMUST00000047321.9	ENSMUSG00000055116.9	Arntl	chr7	protein_coding	aryl hydrocarbon receptor nuclear translocator-like
chr7	112833903;112842718	112842559;112873833	+	112833903	112873833	cassetteExon	0.5	100	100	ENSMUST00000047321.9	ENSMUSG00000055116.9	Arntl	chr7	protein_coding	aryl hydrocarbon receptor nuclear translocator-like
chr7	112880009;112880629	112880609;112882464	+	112880009	112882464	cassetteExon	0.5	100	100	ENSMUST00000047321.9	ENSMUSG00000055116.9	Arntl	chr7	protein_coding	aryl hydrocarbon receptor nuclear translocator-like
chr7	112833903	112842559	+	112833903	112879857	A3SS	0.33	50	50	ENSMUST00000210074.2	ENSMUSG00000055116.9	Arntl	chr7	protein_coding	aryl hydrocarbon receptor nuclear translocator-like
chr7	112833903	112873833	+	112833903	112879857	A3SS	0.33	50	50	ENSMUST00000210074.2	ENSMUSG00000055116.9	Arntl	chr7	protein_coding	aryl hydrocarbon receptor nuclear translocator-like
chr7	112880009	112880609	+	112880009	112882728	A3SS	0.33	50	50	ENSMUST00000210074.2	ENSMUSG00000055116.9	Arntl	chr7	protein_coding	aryl hydrocarbon receptor nuclear translocator-like
chr7	112878789	112879857	+	112833903	112879857	A5SS	0.5	50	50	ENSMUST00000210074.2	ENSMUSG00000055116.9	Arntl	chr7	protein_coding	aryl hydrocarbon receptor nuclear translocator-like
chr7	112934725	112950988	-	112934725	112946239	5pMXE	0.33	50	50	ENSMUST00000117577.8	ENSMUSG00000038187.15	Btbd10	chr7	protein_coding	BTB (POZ) domain containing 10
chr7	112934725	112968079	-	112934725	112946239	5pMXE	0.33	50	50	ENSMUST00000117577.8	ENSMUSG00000038187.15	Btbd10	chr7	protein_coding	BTB (POZ) domain containing 10
chr7	112927666	112929151	-	112927666	112929062	A5SS	0.5	50	50	ENSMUST00000117577.8	ENSMUSG00000038187.15	Btbd10	chr7	protein_coding	BTB (POZ) domain containing 10
chr7	112964176	112968079	-	112934725	112968079	A3SS	0.5	50	50	ENSMUST00000119278.8	ENSMUSG00000038187.15	Btbd10	chr7	protein_coding	BTB (POZ) domain containing 10
chr7	112934725	112950988	-	112934725	112968079	A5SS	0.33	50	50	ENSMUST00000119278.8	ENSMUSG00000038187.15	Btbd10	chr7	protein_coding	BTB (POZ) domain containing 10
chr7	113151209;113153495	113153324;113160583	+	113151209;113153020	113152849;113160583	MXE	0.5	100	100	ENSMUST00000033018.15	ENSMUSG00000030759.17	Far1	chr7	protein_coding	fatty acyl CoA reductase 1
chr7	113125245	113138484	+	113125245	113138480	A3SS	0.5	50	50	ENSMUST00000033018.15	ENSMUSG00000030759.17	Far1	chr7	protein_coding	fatty acyl CoA reductase 1
chr7	113113235	113125195	+	113113144	113125195	A5SS	0.33	50	50	ENSMUST00000033018.15	ENSMUSG00000030759.17	Far1	chr7	protein_coding	fatty acyl CoA reductase 1
chr7	113113580	113125195	+	113113144	113125195	A5SS	0.33	50	50	ENSMUST00000033018.15	ENSMUSG00000030759.17	Far1	chr7	protein_coding	fatty acyl CoA reductase 1
chr7	113113580	113125195	+	113113235	113125195	A5SS	0.33	50	50	ENSMUST00000129087.8	ENSMUSG00000030759.17	Far1	chr7	protein_coding	fatty acyl CoA reductase 1
chr7	113139893;113145051	113144967;113149845	-	113139893	113149845	cassetteExon	0.5	100	100	ENSMUST00000156875.8	ENSMUSG00000084984.9	Far1os	chr7	lncRNA	fatty acyl CoA reductase 1, opposite strand
chr7	113137706	113139814	-	113129901	113139814	A3SS	0.5	50	50	ENSMUST00000156875.8	ENSMUSG00000084984.9	Far1os	chr7	lncRNA	fatty acyl CoA reductase 1, opposite strand
chr7	113650933	113657775	-	113649654	113657775	A3SS	0.5	50	50	ENSMUST00000069449.7	ENSMUSG00000055723.7	Rras2	chr7	protein_coding	related RAS viral (r-ras) oncogene 2
chr7	113816946	113817227	-	113816946	113818761	A5SS	0.5	50	50	ENSMUST00000033012.9	ENSMUSG00000030754.10	Copb1	chr7	protein_coding	coatomer protein complex, subunit beta 1
chr7	113873695	113875196	-	113873695	113875236	A5SS	0.5	50	50	ENSMUST00000033008.10	ENSMUSG00000030751.19	Psma1	chr7	protein_coding	proteasome subunit alpha 1
chr7	113995270	114014098	-	113920486	114014098	A3SS	0.5	50	50	ENSMUST00000163996.2	ENSMUSG00000087475.4	4933406I18Rik	chr7	lncRNA	RIKEN cDNA 4933406I18 gene
chr7	114151317;114153870	114153826;114161968	-	114151317;114152588	114151956;114161968	MXE	0.5	100	100	ENSMUST00000211506.2	ENSMUSG00000030670.17	Cyp2r1	chr7	protein_coding	cytochrome P450, family 2, subfamily r, polypeptide 1
chr7	114152588;114153870	114153826;114161968	-	114152588	114161968	cassetteExon	0.5	100	100	ENSMUST00000211506.2	ENSMUSG00000030670.17	Cyp2r1	chr7	protein_coding	cytochrome P450, family 2, subfamily r, polypeptide 1
chr7	114151317;114153967	114153826;114161968	-	114151317;114152588	114151956;114161968	MXE	0.5	100	100	ENSMUST00000211506.2	ENSMUSG00000030670.17	Cyp2r1	chr7	protein_coding	cytochrome P450, family 2, subfamily r, polypeptide 1
chr7	114152588;114153967	114153826;114161968	-	114152588	114161968	cassetteExon	0.5	100	100	ENSMUST00000211506.2	ENSMUSG00000030670.17	Cyp2r1	chr7	protein_coding	cytochrome P450, family 2, subfamily r, polypeptide 1
chr7	114151081	114151956	-	114151317	114151956	A3SS	0.5	50	50	ENSMUST00000211506.2	ENSMUSG00000030670.17	Cyp2r1	chr7	protein_coding	cytochrome P450, family 2, subfamily r, polypeptide 1
chr7	114151317	114153826	-	114151317;114152588	114151956;114153826	ES	0.2	50	50	ENSMUST00000032908.15	ENSMUSG00000030670.17	Cyp2r1	chr7	protein_coding	cytochrome P450, family 2, subfamily r, polypeptide 1
chr7	114152045	114153826	-	114152588	114153826	A3SS	0.2	50	50	ENSMUST00000032908.15	ENSMUSG00000030670.17	Cyp2r1	chr7	protein_coding	cytochrome P450, family 2, subfamily r, polypeptide 1
chr7	114152111	114153826	-	114152588	114153826	A3SS	0.2	50	50	ENSMUST00000032908.15	ENSMUSG00000030670.17	Cyp2r1	chr7	protein_coding	cytochrome P450, family 2, subfamily r, polypeptide 1
chr7	114152179	114153826	-	114152588	114153826	A3SS	0.2	50	50	ENSMUST00000032908.15	ENSMUSG00000030670.17	Cyp2r1	chr7	protein_coding	cytochrome P450, family 2, subfamily r, polypeptide 1
chr7	114153870	114161968	-	114153967	114161968	A3SS	0.33	50	50	ENSMUST00000032908.15	ENSMUSG00000030670.17	Cyp2r1	chr7	protein_coding	cytochrome P450, family 2, subfamily r, polypeptide 1
chr7	114151317	114153826	-	114151317;114152111	114151956;114153826	ES	0.2	50	50	ENSMUST00000138712.8	ENSMUSG00000030670.17	Cyp2r1	chr7	protein_coding	cytochrome P450, family 2, subfamily r, polypeptide 1
chr7	114152045	114153826	-	114152111	114153826	A3SS	0.2	50	50	ENSMUST00000138712.8	ENSMUSG00000030670.17	Cyp2r1	chr7	protein_coding	cytochrome P450, family 2, subfamily r, polypeptide 1
chr7	114152179	114153826	-	114152111	114153826	A3SS	0.2	50	50	ENSMUST00000138712.8	ENSMUSG00000030670.17	Cyp2r1	chr7	protein_coding	cytochrome P450, family 2, subfamily r, polypeptide 1
chr7	114152588	114161968	-	114153870	114161968	A3SS&ES	0.33	50	50	ENSMUST00000138712.8	ENSMUSG00000030670.17	Cyp2r1	chr7	protein_coding	cytochrome P450, family 2, subfamily r, polypeptide 1
chr7	114151317;114152045	114151956;114153826	-	114151317	114153826	cassetteExon	0.5	100	100	ENSMUST00000119712.8	ENSMUSG00000030670.17	Cyp2r1	chr7	protein_coding	cytochrome P450, family 2, subfamily r, polypeptide 1
chr7	114151317;114152179	114151956;114153826	-	114151317	114153826	cassetteExon	0.5	100	100	ENSMUST00000119712.8	ENSMUSG00000030670.17	Cyp2r1	chr7	protein_coding	cytochrome P450, family 2, subfamily r, polypeptide 1
chr7	114152588	114153826	-	114151317	114153826	A3SS	0.2	50	50	ENSMUST00000119712.8	ENSMUSG00000030670.17	Cyp2r1	chr7	protein_coding	cytochrome P450, family 2, subfamily r, polypeptide 1
chr7	114152588	114161968	-	114153967	114161968	A3SS&ES	0.33	50	50	ENSMUST00000119712.8	ENSMUSG00000030670.17	Cyp2r1	chr7	protein_coding	cytochrome P450, family 2, subfamily r, polypeptide 1
chr7	114152588	114161968	-	114152588	114153826	5pMXE	0.5	50	50	ENSMUST00000128587.8	ENSMUSG00000030670.17	Cyp2r1	chr7	protein_coding	cytochrome P450, family 2, subfamily r, polypeptide 1
chr7	114152045	114153826	-	114152179	114153826	A3SS	0.2	50	50	ENSMUST00000133484.8	ENSMUSG00000030670.17	Cyp2r1	chr7	protein_coding	cytochrome P450, family 2, subfamily r, polypeptide 1
chr7	114233020	114233703	-	114231834	114233703	A3SS	0.5	50	50	ENSMUST00000032906.11	ENSMUSG00000030669.14	Calca	chr7	protein_coding	calcitonin/calcitonin-related polypeptide, alpha
chr7	114234456	114235423	-	114234456	114235447	A5SS	0.5	50	50	ENSMUST00000032906.11	ENSMUSG00000030669.14	Calca	chr7	protein_coding	calcitonin/calcitonin-related polypeptide, alpha
chr7	114319449;114320947	114320870;114321210	+	114319449	114321210	cassetteExon	0.5	100	100	ENSMUST00000032902.11	ENSMUSG00000030666.12	Calcb	chr7	protein_coding	calcitonin-related polypeptide, beta
chr7	114345241	114368167	+	114343211	114368167	A5SS	0.25	50	50	ENSMUST00000161800.2	ENSMUSG00000048782.16	Insc	chr7	protein_coding	INSC spindle orientation adaptor protein
chr7	114353141	114368167	+	114343211	114368167	A5SS	0.25	50	50	ENSMUST00000161800.2	ENSMUSG00000048782.16	Insc	chr7	protein_coding	INSC spindle orientation adaptor protein
chr7	114368057	114368167	+	114343211	114368167	A5SS	0.25	50	50	ENSMUST00000161800.2	ENSMUSG00000048782.16	Insc	chr7	protein_coding	INSC spindle orientation adaptor protein
chr7	114371328	114390187	+	114368267	114390187	A5SS	0.5	50	50	ENSMUST00000161800.2	ENSMUSG00000048782.16	Insc	chr7	protein_coding	INSC spindle orientation adaptor protein
chr7	114353141	114368167	+	114345241	114368167	A5SS	0.25	50	50	ENSMUST00000136645.8	ENSMUSG00000048782.16	Insc	chr7	protein_coding	INSC spindle orientation adaptor protein
chr7	114368057	114368167	+	114345241	114368167	A5SS	0.25	50	50	ENSMUST00000136645.8	ENSMUSG00000048782.16	Insc	chr7	protein_coding	INSC spindle orientation adaptor protein
chr7	114403827	114428269	+	114403827;114410963	114410838;114428269	ES	0.5	50	50	ENSMUST00000169913.8	ENSMUSG00000048782.16	Insc	chr7	protein_coding	INSC spindle orientation adaptor protein
chr7	114368057	114368167	+	114353141	114368167	A5SS	0.25	50	50	ENSMUST00000139670.2	ENSMUSG00000048782.16	Insc	chr7	protein_coding	INSC spindle orientation adaptor protein
chr7	114548156;114556873	114556743;114557262	+	114548156	114557262	cassetteExon	0.5	100	100	ENSMUST00000205913.2	ENSMUSG00000108379.2	A730082K24Rik	chr7	lncRNA	RIKEN cDNA A730082K24 gene
chr7	114573368;114574391	114574225;114581902	+	114573368	114581902	cassetteExon	0.5	100	100	ENSMUST00000205913.2	ENSMUSG00000108379.2	A730082K24Rik	chr7	lncRNA	RIKEN cDNA A730082K24 gene
chr7	114550576	114557262	+	114548156	114557262	A5SS	0.25	50	50	ENSMUST00000205913.2	ENSMUSG00000108379.2	A730082K24Rik	chr7	lncRNA	RIKEN cDNA A730082K24 gene
chr7	114550591	114557262	+	114548156	114557262	A5SS	0.25	50	50	ENSMUST00000205913.2	ENSMUSG00000108379.2	A730082K24Rik	chr7	lncRNA	RIKEN cDNA A730082K24 gene
chr7	114550576	114557262	+	114556873	114557262	A5SS&ES	0.25	50	50	ENSMUST00000205365.2	ENSMUSG00000108379.2	A730082K24Rik	chr7	lncRNA	RIKEN cDNA A730082K24 gene
chr7	114550591	114557262	+	114556873	114557262	A5SS&ES	0.25	50	50	ENSMUST00000205365.2	ENSMUSG00000108379.2	A730082K24Rik	chr7	lncRNA	RIKEN cDNA A730082K24 gene
chr7	114573368	114581902	+	114573368	114574225	3pMXE	0.5	50	50	ENSMUST00000206806.2	ENSMUSG00000108379.2	A730082K24Rik	chr7	lncRNA	RIKEN cDNA A730082K24 gene
chr7	114550591	114557262	+	114550576	114557262	A5SS	0.25	50	50	ENSMUST00000206806.2	ENSMUSG00000108379.2	A730082K24Rik	chr7	lncRNA	RIKEN cDNA A730082K24 gene
chr7	115543197	115632613	-	115543197	115630095	5pMXE	0.2	50	50	ENSMUST00000206034.2	ENSMUSG00000051910.14	Sox6	chr7	protein_coding	SRY (sex determining region Y)-box 6
chr7	115543197	115633350	-	115543197	115630095	5pMXE	0.2	50	50	ENSMUST00000206034.2	ENSMUSG00000051910.14	Sox6	chr7	protein_coding	SRY (sex determining region Y)-box 6
chr7	115543197	115637912	-	115543197	115630095	5pMXE	0.2	50	50	ENSMUST00000206034.2	ENSMUSG00000051910.14	Sox6	chr7	protein_coding	SRY (sex determining region Y)-box 6
chr7	115149394	115179800	-	115149391	115179800	A3SS	0.33	50	50	ENSMUST00000206034.2	ENSMUSG00000051910.14	Sox6	chr7	protein_coding	SRY (sex determining region Y)-box 6
chr7	115178373	115179800	-	115149391	115179800	A3SS	0.33	50	50	ENSMUST00000206034.2	ENSMUSG00000051910.14	Sox6	chr7	protein_coding	SRY (sex determining region Y)-box 6
chr7	115196851	115258751	-	115196854	115258751	A3SS	0.5	50	50	ENSMUST00000206034.2	ENSMUSG00000051910.14	Sox6	chr7	protein_coding	SRY (sex determining region Y)-box 6
chr7	115196854	115197053	-	115196854	115258751	A5SS	0.5	50	50	ENSMUST00000206034.2	ENSMUSG00000051910.14	Sox6	chr7	protein_coding	SRY (sex determining region Y)-box 6
chr7	115400844	115423654	-	115400844	115543129	A5SS	0.25	50	50	ENSMUST00000206034.2	ENSMUSG00000051910.14	Sox6	chr7	protein_coding	SRY (sex determining region Y)-box 6
chr7	115400844	115445264	-	115400844	115543129	A5SS	0.25	50	50	ENSMUST00000206034.2	ENSMUSG00000051910.14	Sox6	chr7	protein_coding	SRY (sex determining region Y)-box 6
chr7	115400844	115459020	-	115400844	115543129	A5SS	0.25	50	50	ENSMUST00000206034.2	ENSMUSG00000051910.14	Sox6	chr7	protein_coding	SRY (sex determining region Y)-box 6
chr7	115543197	115594226	-	115543197	115630095	A5SS	0.2	50	50	ENSMUST00000206034.2	ENSMUSG00000051910.14	Sox6	chr7	protein_coding	SRY (sex determining region Y)-box 6
chr7	115149394	115179800	-	115149394;115178373	115178251;115179800	ES	0.33	50	50	ENSMUST00000072804.11	ENSMUSG00000051910.14	Sox6	chr7	protein_coding	SRY (sex determining region Y)-box 6
chr7	115543197	115632613	-	115543197	115594226	5pMXE	0.2	50	50	ENSMUST00000072804.11	ENSMUSG00000051910.14	Sox6	chr7	protein_coding	SRY (sex determining region Y)-box 6
chr7	115543197	115633350	-	115543197	115594226	5pMXE	0.2	50	50	ENSMUST00000072804.11	ENSMUSG00000051910.14	Sox6	chr7	protein_coding	SRY (sex determining region Y)-box 6
chr7	115543197	115637912	-	115543197	115594226	5pMXE	0.2	50	50	ENSMUST00000072804.11	ENSMUSG00000051910.14	Sox6	chr7	protein_coding	SRY (sex determining region Y)-box 6
chr7	115543197	115632613	-	115543197	115637912	A5SS	0.2	50	50	ENSMUST00000166877.8	ENSMUSG00000051910.14	Sox6	chr7	protein_coding	SRY (sex determining region Y)-box 6
chr7	115543197	115633350	-	115543197	115637912	A5SS	0.2	50	50	ENSMUST00000166877.8	ENSMUSG00000051910.14	Sox6	chr7	protein_coding	SRY (sex determining region Y)-box 6
chr7	115400844	115445264	-	115400844	115423654	5pMXE	0.25	50	50	ENSMUST00000169129.8	ENSMUSG00000051910.14	Sox6	chr7	protein_coding	SRY (sex determining region Y)-box 6
chr7	115400844	115459020	-	115400844	115423654	5pMXE	0.25	50	50	ENSMUST00000169129.8	ENSMUSG00000051910.14	Sox6	chr7	protein_coding	SRY (sex determining region Y)-box 6
chr7	115400844	115459020	-	115400844	115445264	5pMXE	0.25	50	50	ENSMUST00000166207.3	ENSMUSG00000051910.14	Sox6	chr7	protein_coding	SRY (sex determining region Y)-box 6
chr7	115543197	115633350	-	115543197	115632613	5pMXE	0.2	50	50	ENSMUST00000205980.2	ENSMUSG00000051910.14	Sox6	chr7	protein_coding	SRY (sex determining region Y)-box 6
chr7	115687649;115692622	115692260;115698675	+	115687649	115698675	cassetteExon	0.5	100	100	ENSMUST00000205427.2	ENSMUSG00000030663.13	1110004F10Rik	chr7	protein_coding	RIKEN cDNA 1110004F10 gene
chr7	115687649;115692760	115692260;115698675	+	115687649	115698675	cassetteExon	0.5	100	100	ENSMUST00000205427.2	ENSMUSG00000030663.13	1110004F10Rik	chr7	protein_coding	RIKEN cDNA 1110004F10 gene
chr7	115697188	115698675	+	115687649	115698675	A5SS	0.25	50	50	ENSMUST00000205427.2	ENSMUSG00000030663.13	1110004F10Rik	chr7	protein_coding	RIKEN cDNA 1110004F10 gene
chr7	115701239	115702430	+	115701239	115702446	A3SS	0.5	50	50	ENSMUST00000205450.2	ENSMUSG00000030663.13	1110004F10Rik	chr7	protein_coding	RIKEN cDNA 1110004F10 gene
chr7	115692622	115698675	+	115697188	115698675	A5SS&ES	0.25	50	50	ENSMUST00000205450.2	ENSMUSG00000030663.13	1110004F10Rik	chr7	protein_coding	RIKEN cDNA 1110004F10 gene
chr7	115692622	115702446	+	115701239	115702446	A5SS&ES	0.5	50	50	ENSMUST00000205450.2	ENSMUSG00000030663.13	1110004F10Rik	chr7	protein_coding	RIKEN cDNA 1110004F10 gene
chr7	115692760	115698675	+	115697188	115698675	A5SS&ES	0.25	50	50	ENSMUST00000205450.2	ENSMUSG00000030663.13	1110004F10Rik	chr7	protein_coding	RIKEN cDNA 1110004F10 gene
chr7	115687649	115698675	+	115692760	115698675	5pMXE	0.25	50	50	ENSMUST00000032899.12	ENSMUSG00000030663.13	1110004F10Rik	chr7	protein_coding	RIKEN cDNA 1110004F10 gene
chr7	115692622	115698675	+	115692760	115698675	A5SS	0.25	50	50	ENSMUST00000032899.12	ENSMUSG00000030663.13	1110004F10Rik	chr7	protein_coding	RIKEN cDNA 1110004F10 gene
chr7	115687649	115698675	+	115692622	115698675	5pMXE	0.25	50	50	ENSMUST00000106608.8	ENSMUSG00000030663.13	1110004F10Rik	chr7	protein_coding	RIKEN cDNA 1110004F10 gene
chr7	115692622	115698675	+	115692622	115702446	A3SS	0.5	50	50	ENSMUST00000106607.2	ENSMUSG00000030663.13	1110004F10Rik	chr7	protein_coding	RIKEN cDNA 1110004F10 gene
chr7	115681321	115688348	-	115681321;115685990	115685862;115688348	ES	0.5	50	50	ENSMUST00000140689.8	ENSMUSG00000087621.8	1700003G18Rik	chr7	lncRNA	RIKEN cDNA 1700003G18 gene
chr7	115788588	115857558	-	115788588	115836687	5pMXE	0.14	50	50	ENSMUST00000182834.8	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115788588	115863278	-	115788588	115836687	5pMXE	0.14	50	50	ENSMUST00000182834.8	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115788588	115907160	-	115788588	115836687	5pMXE	0.14	50	50	ENSMUST00000182834.8	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115724055;115726276	115726171;115727789	-	115724055	115727789	cassetteExon	0.5	100	100	ENSMUST00000182834.8	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115724055;115726281	115726171;115727789	-	115724055	115727789	cassetteExon	0.5	100	100	ENSMUST00000182834.8	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115744473;115747568	115747488;115753868	-	115744473	115753868	cassetteExon	0.5	100	100	ENSMUST00000182834.8	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115753921;115756210	115756091;115756717	-	115753921	115756717	cassetteExon	0.5	100	100	ENSMUST00000182834.8	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115770072	115774964	-	115770072	115774947	A5SS	0.5	50	50	ENSMUST00000182834.8	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115780520	115783722	-	115780520	115788505	A5SS	0.33	50	50	ENSMUST00000182834.8	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115780520	115786179	-	115780520	115788505	A5SS	0.33	50	50	ENSMUST00000182834.8	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115788588	115788712	-	115788588	115836687	A5SS	0.14	50	50	ENSMUST00000182834.8	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115788588	115789011	-	115788588	115836687	A5SS	0.14	50	50	ENSMUST00000182834.8	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115788588	115797542	-	115788588	115836687	A5SS	0.14	50	50	ENSMUST00000182834.8	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115726276	115727789	-	115726281	115727789	A3SS	0.33	50	50	ENSMUST00000217046.2	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115788588	115788712	-	115788588	115907160	A5SS	0.14	50	50	ENSMUST00000181998.8	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115788588	115789011	-	115788588	115907160	A5SS	0.14	50	50	ENSMUST00000181998.8	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115788588	115797542	-	115788588	115907160	A5SS	0.14	50	50	ENSMUST00000181998.8	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115788588	115857558	-	115788588	115907160	A5SS	0.14	50	50	ENSMUST00000181998.8	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115788588	115863278	-	115788588	115907160	A5SS	0.14	50	50	ENSMUST00000181998.8	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115788588	115797542	-	115788588	115789011	5pMXE	0.14	50	50	ENSMUST00000084664.11	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115788588	115857558	-	115788588	115789011	5pMXE	0.14	50	50	ENSMUST00000084664.11	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115788588	115863278	-	115788588	115789011	5pMXE	0.14	50	50	ENSMUST00000084664.11	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115788588	115788712	-	115788588	115789011	A5SS	0.14	50	50	ENSMUST00000084664.11	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115788588	115857558	-	115788588	115797542	5pMXE	0.14	50	50	ENSMUST00000181981.8	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115788588	115863278	-	115788588	115797542	5pMXE	0.14	50	50	ENSMUST00000181981.8	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115788588	115788712	-	115788588	115797542	A5SS	0.14	50	50	ENSMUST00000181981.8	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115788588	115857558	-	115788588	115788712	5pMXE	0.14	50	50	ENSMUST00000182511.8	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115788588	115863278	-	115788588	115788712	5pMXE	0.14	50	50	ENSMUST00000182511.8	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115780520	115786179	-	115780520	115783722	5pMXE	0.33	50	50	ENSMUST00000182549.8	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115788588	115863278	-	115788588	115857558	5pMXE	0.14	50	50	ENSMUST00000206662.2	ENSMUSG00000045659.19	Plekha7	chr7	protein_coding	pleckstrin homology domain containing, family A member 7
chr7	115881072	115881918	-	115880912	115881918	A3SS	0.5	50	50	ENSMUST00000206322.2	ENSMUSG00000108650.2	Gm44867	chr7	lncRNA	predicted gene 44867
chr7	115949377	115951033	-	115949377;115950164	115950008;115951033	ES	0.5	50	50	ENSMUST00000170430.3	ENSMUSG00000030660.10	Pik3c2a	chr7	protein_coding	phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha
chr7	115993593	116016688	-	115993593;116005198	116005095;116016688	ES	0.5	50	50	ENSMUST00000170430.3	ENSMUSG00000030660.10	Pik3c2a	chr7	protein_coding	phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha
chr7	116017816;116041913	116041826;116042539	-	116017816	116042539	cassetteExon	0.5	100	100	ENSMUST00000170430.3	ENSMUSG00000030660.10	Pik3c2a	chr7	protein_coding	phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha
chr7	116103719;116105333	116105253;116108690	+	116103719	116108690	cassetteExon	0.5	100	100	ENSMUST00000032895.15	ENSMUSG00000030659.15	Nucb2	chr7	protein_coding	nucleobindin 2
chr7	116128302;116129826	116129684;116132307	+	116128302	116132307	cassetteExon	0.5	100	100	ENSMUST00000032895.15	ENSMUSG00000030659.15	Nucb2	chr7	protein_coding	nucleobindin 2
chr7	117714469	117714695	-	117714469	117715359	A5SS	0.25	50	50	ENSMUST00000131374.8	ENSMUSG00000008683.17	Rps15a	chr7	protein_coding	ribosomal protein S15A
chr7	117714469	117714963	-	117714469	117715359	A5SS	0.25	50	50	ENSMUST00000131374.8	ENSMUSG00000008683.17	Rps15a	chr7	protein_coding	ribosomal protein S15A
chr7	117714469	117715320	-	117714469	117715359	A5SS	0.25	50	50	ENSMUST00000131374.8	ENSMUSG00000008683.17	Rps15a	chr7	protein_coding	ribosomal protein S15A
chr7	117714469	117714963	-	117714469	117714695	5pMXE	0.25	50	50	ENSMUST00000106588.8	ENSMUSG00000008683.17	Rps15a	chr7	protein_coding	ribosomal protein S15A
chr7	117714469	117715320	-	117714469	117714695	5pMXE	0.25	50	50	ENSMUST00000106588.8	ENSMUSG00000008683.17	Rps15a	chr7	protein_coding	ribosomal protein S15A
chr7	117714469	117715320	-	117714469	117714963	A5SS	0.25	50	50	ENSMUST00000131840.3	ENSMUSG00000008683.17	Rps15a	chr7	protein_coding	ribosomal protein S15A
chr7	117721266	117726357	-	117721266;117725738	117725619;117726357	ES	0.5	50	50	ENSMUST00000032888.10	ENSMUSG00000030654.10	Arl6ip1	chr7	protein_coding	ADP-ribosylation factor-like 6 interacting protein 1
chr7	117725738	117728692	-	117725738;117726490	117726357;117728692	ES	0.33	50	50	ENSMUST00000032888.10	ENSMUSG00000030654.10	Arl6ip1	chr7	protein_coding	ADP-ribosylation factor-like 6 interacting protein 1
chr7	117725738;117728291	117728119;117728692	-	117725738;117726490	117726357;117728692	MXE	0.5	100	100	ENSMUST00000032888.10	ENSMUSG00000030654.10	Arl6ip1	chr7	protein_coding	ADP-ribosylation factor-like 6 interacting protein 1
chr7	117726490;117728291	117728119;117728692	-	117726490	117728692	cassetteExon	0.5	100	100	ENSMUST00000032888.10	ENSMUSG00000030654.10	Arl6ip1	chr7	protein_coding	ADP-ribosylation factor-like 6 interacting protein 1
chr7	117725738	117728119	-	117725738;117726490	117726357;117728119	ES	0.5	50	50	ENSMUST00000205182.3	ENSMUSG00000030654.10	Arl6ip1	chr7	protein_coding	ADP-ribosylation factor-like 6 interacting protein 1
chr7	117726490	117728692	-	117726490	117728119	5pMXE	0.5	50	50	ENSMUST00000205182.3	ENSMUSG00000030654.10	Arl6ip1	chr7	protein_coding	ADP-ribosylation factor-like 6 interacting protein 1
chr7	117721266;117726490	117726357;117728692	-	117721266;117725738	117725619;117728692	MXE	0.5	100	100	ENSMUST00000203154.3	ENSMUSG00000030654.10	Arl6ip1	chr7	protein_coding	ADP-ribosylation factor-like 6 interacting protein 1
chr7	117725738;117728291	117728119;117728692	-	117725738	117728692	cassetteExon	0.5	100	100	ENSMUST00000203154.3	ENSMUSG00000030654.10	Arl6ip1	chr7	protein_coding	ADP-ribosylation factor-like 6 interacting protein 1
chr7	117721266;117726490	117726357;117728119	-	117721266;117725738	117725619;117728119	MXE	0.5	100	100	ENSMUST00000204005.3	ENSMUSG00000030654.10	Arl6ip1	chr7	protein_coding	ADP-ribosylation factor-like 6 interacting protein 1
chr7	117721266;117726490	117726357;117728692	-	117721266;117728291	117725619;117728692	MXE	0.5	100	100	ENSMUST00000204005.3	ENSMUSG00000030654.10	Arl6ip1	chr7	protein_coding	ADP-ribosylation factor-like 6 interacting protein 1
chr7	117721266	117726357	-	117725738	117726357	3pMXE	0.5	50	50	ENSMUST00000206536.2	ENSMUSG00000030654.10	Arl6ip1	chr7	protein_coding	ADP-ribosylation factor-like 6 interacting protein 1
chr7	117810098	117812112	-	117810098;117811798	117811643;117812112	ES	0.5	50	50	ENSMUST00000032891.15	ENSMUSG00000030655.16	Smg1	chr7	protein_coding	SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)
chr7	117812275;117817000	117816943;117842428	-	117812275	117842428	cassetteExon	0.5	100	100	ENSMUST00000032891.15	ENSMUSG00000030655.16	Smg1	chr7	protein_coding	SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)
chr7	117734841	117734954	-	117734841	117735909	A5SS	0.5	50	50	ENSMUST00000032891.15	ENSMUSG00000030655.16	Smg1	chr7	protein_coding	SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)
chr7	118042359	118047037	-	118042359	118042569	5pMXE	0.5	50	50	ENSMUST00000081574.8	ENSMUSG00000058420.9	Syt17	chr7	protein_coding	synaptotagmin XVII
chr7	118042359	118047037	-	118042364	118047037	A3SS	0.5	50	50	ENSMUST00000203796.4	ENSMUSG00000058420.9	Syt17	chr7	protein_coding	synaptotagmin XVII
chr7	118124517	118125047	-	118116623	118125047	A3SS	0.33	50	50	ENSMUST00000098090.10	ENSMUSG00000030652.12	Coq7	chr7	protein_coding	demethyl-Q 7
chr7	118124588	118125047	-	118116623	118125047	A3SS	0.33	50	50	ENSMUST00000098090.10	ENSMUSG00000030652.12	Coq7	chr7	protein_coding	demethyl-Q 7
chr7	118124588	118125047	-	118124517	118125047	A3SS	0.33	50	50	ENSMUST00000032887.4	ENSMUSG00000030652.12	Coq7	chr7	protein_coding	demethyl-Q 7
chr7	118171612	118183827	-	118165648	118183827	A3SS	0.5	50	50	ENSMUST00000044195.6	ENSMUSG00000042246.6	Tmc7	chr7	protein_coding	transmembrane channel-like gene family 7
chr7	118191683;118194257	118194176;118195648	+	118191683	118195648	cassetteExon	0.5	100	100	ENSMUST00000208859.2	ENSMUSG00000109284.2	B230311B06Rik	chr7	lncRNA	RIKEN cDNA B230311B06 gene
chr7	118191832	118194176	+	118191683	118194176	A5SS	0.33	50	50	ENSMUST00000209113.2	ENSMUSG00000109284.2	B230311B06Rik	chr7	lncRNA	RIKEN cDNA B230311B06 gene
chr7	118191859	118194176	+	118191683	118194176	A5SS	0.33	50	50	ENSMUST00000209113.2	ENSMUSG00000109284.2	B230311B06Rik	chr7	lncRNA	RIKEN cDNA B230311B06 gene
chr7	118191683	118195648	+	118194257	118195648	A5SS&ES	0.5	50	50	ENSMUST00000207610.2	ENSMUSG00000109284.2	B230311B06Rik	chr7	lncRNA	RIKEN cDNA B230311B06 gene
chr7	118191832	118194176	+	118191859	118194176	A5SS	0.33	50	50	ENSMUST00000207610.2	ENSMUSG00000109284.2	B230311B06Rik	chr7	lncRNA	RIKEN cDNA B230311B06 gene
chr7	118199530;118221884	118221754;118222226	+	118199530	118222226	cassetteExon	0.5	100	100	ENSMUST00000098088.11	ENSMUSG00000030650.19	Tmc5	chr7	protein_coding	transmembrane channel-like gene family 5
chr7	118233491	118237352	+	118228065	118237352	A5SS	0.5	50	50	ENSMUST00000098088.11	ENSMUSG00000030650.19	Tmc5	chr7	protein_coding	transmembrane channel-like gene family 5
chr7	118199530	118222226	+	118221884	118222226	5pMXE	0.5	50	50	ENSMUST00000155572.2	ENSMUSG00000030650.19	Tmc5	chr7	protein_coding	transmembrane channel-like gene family 5
chr7	118297949	118304613	-	118297953	118304613	A3SS	0.33	50	50	ENSMUST00000038791.15	ENSMUSG00000033917.16	Gde1	chr7	protein_coding	glycerophosphodiester phosphodiesterase 1
chr7	118297953	118304494	-	118297953	118304613	A5SS	0.5	50	50	ENSMUST00000038791.15	ENSMUSG00000033917.16	Gde1	chr7	protein_coding	glycerophosphodiester phosphodiesterase 1
chr7	118297949	118304613	-	118291017	118304613	A3SS	0.33	50	50	ENSMUST00000207323.2	ENSMUSG00000033917.16	Gde1	chr7	protein_coding	glycerophosphodiester phosphodiesterase 1
chr7	118297953	118304613	-	118291017	118304613	A3SS	0.33	50	50	ENSMUST00000207323.2	ENSMUSG00000033917.16	Gde1	chr7	protein_coding	glycerophosphodiester phosphodiesterase 1
chr7	118291017	118293716	-	118291017	118304613	A5SS	0.5	50	50	ENSMUST00000207323.2	ENSMUSG00000033917.16	Gde1	chr7	protein_coding	glycerophosphodiester phosphodiesterase 1
chr7	118331676	118334491	+	118331676;118332195	118332110;118334491	ES	0.5	50	50	ENSMUST00000106557.8	ENSMUSG00000033904.17	Ccp110	chr7	protein_coding	centriolar coiled coil protein 110
chr7	118400569	118406214	+	118400569;118403407	118403327;118406214	ES	0.5	50	50	ENSMUST00000059390.13	ENSMUSG00000030982.20	Vps35l	chr7	protein_coding	VPS35 endosomal protein sorting factor like
chr7	118406277	118411028	+	118406277;118409199	118409101;118411028	ES	0.5	50	50	ENSMUST00000059390.13	ENSMUSG00000030982.20	Vps35l	chr7	protein_coding	VPS35 endosomal protein sorting factor like
chr7	118409199	118412753	+	118409199;118411105	118411028;118412753	ES	0.5	50	50	ENSMUST00000059390.13	ENSMUSG00000030982.20	Vps35l	chr7	protein_coding	VPS35 endosomal protein sorting factor like
chr7	118339998	118342833	+	118339998	118342818	A3SS	0.5	50	50	ENSMUST00000059390.13	ENSMUSG00000030982.20	Vps35l	chr7	protein_coding	VPS35 endosomal protein sorting factor like
chr7	118359468	118360989	+	118359468	118365588	A3SS	0.5	50	50	ENSMUST00000059390.13	ENSMUSG00000030982.20	Vps35l	chr7	protein_coding	VPS35 endosomal protein sorting factor like
chr7	118379522	118382978	+	118379522	118389233	A3SS	0.5	50	50	ENSMUST00000059390.13	ENSMUSG00000030982.20	Vps35l	chr7	protein_coding	VPS35 endosomal protein sorting factor like
chr7	118363919	118365588	+	118359468	118365588	A5SS	0.5	50	50	ENSMUST00000059390.13	ENSMUSG00000030982.20	Vps35l	chr7	protein_coding	VPS35 endosomal protein sorting factor like
chr7	118420945	118425407	+	118412867	118425407	A5SS	0.33	50	50	ENSMUST00000059390.13	ENSMUSG00000030982.20	Vps35l	chr7	protein_coding	VPS35 endosomal protein sorting factor like
chr7	118423944	118425407	+	118412867	118425407	A5SS	0.33	50	50	ENSMUST00000059390.13	ENSMUSG00000030982.20	Vps35l	chr7	protein_coding	VPS35 endosomal protein sorting factor like
chr7	118406277;118411105	118411028;118412753	+	118406277;118409199	118409101;118412753	MXE	0.5	100	100	ENSMUST00000106552.8	ENSMUSG00000030982.20	Vps35l	chr7	protein_coding	VPS35 endosomal protein sorting factor like
chr7	118374608	118378911	+	118374608	118389233	A3SS	0.5	50	50	ENSMUST00000106552.8	ENSMUSG00000030982.20	Vps35l	chr7	protein_coding	VPS35 endosomal protein sorting factor like
chr7	118379522	118389233	+	118374608	118389233	A5SS	0.5	50	50	ENSMUST00000106552.8	ENSMUSG00000030982.20	Vps35l	chr7	protein_coding	VPS35 endosomal protein sorting factor like
chr7	118423944	118425407	+	118420945	118425407	A5SS	0.33	50	50	ENSMUST00000131162.2	ENSMUSG00000030982.20	Vps35l	chr7	protein_coding	VPS35 endosomal protein sorting factor like
chr7	118449912	118454846	-	118449912;118452563	118451626;118454846	ES	0.33	50	50	ENSMUST00000116280.9	ENSMUSG00000030980.18	Knop1	chr7	protein_coding	lysine rich nucleolar protein 1
chr7	118452563;118453510	118453408;118454846	-	118452563	118454846	cassetteExon	0.5	100	100	ENSMUST00000116280.9	ENSMUSG00000030980.18	Knop1	chr7	protein_coding	lysine rich nucleolar protein 1
chr7	118447797	118452112	-	118447797	118449844	A5SS&ES	0.5	50	50	ENSMUST00000116280.9	ENSMUSG00000030980.18	Knop1	chr7	protein_coding	lysine rich nucleolar protein 1
chr7	118449912	118452112	-	118449912	118451626	A5SS	0.33	50	50	ENSMUST00000116280.9	ENSMUSG00000030980.18	Knop1	chr7	protein_coding	lysine rich nucleolar protein 1
chr7	118452563	118454611	-	118452563	118454846	A5SS	0.33	50	50	ENSMUST00000116280.9	ENSMUSG00000030980.18	Knop1	chr7	protein_coding	lysine rich nucleolar protein 1
chr7	118447797	118452112	-	118447797;118449912	118449844;118452112	ES	0.5	50	50	ENSMUST00000063607.12	ENSMUSG00000030980.18	Knop1	chr7	protein_coding	lysine rich nucleolar protein 1
chr7	118449912	118454846	-	118449912;118452563	118452112;118454846	ES	0.33	50	50	ENSMUST00000063607.12	ENSMUSG00000030980.18	Knop1	chr7	protein_coding	lysine rich nucleolar protein 1
chr7	118447797;118449912	118449844;118454846	-	118447797;118452563	118452112;118454846	MXE	0.5	100	100	ENSMUST00000126792.9	ENSMUSG00000030980.18	Knop1	chr7	protein_coding	lysine rich nucleolar protein 1
chr7	118453510	118454846	-	118449912	118454846	A3SS	0.33	50	50	ENSMUST00000033277.9	ENSMUSG00000030980.18	Knop1	chr7	protein_coding	lysine rich nucleolar protein 1
chr7	118449912	118451626	-	118449912	118454846	A5SS	0.33	50	50	ENSMUST00000033277.9	ENSMUSG00000030980.18	Knop1	chr7	protein_coding	lysine rich nucleolar protein 1
chr7	118452563	118453408	-	118452563	118454611	A5SS	0.33	50	50	ENSMUST00000106549.9	ENSMUSG00000030980.18	Knop1	chr7	protein_coding	lysine rich nucleolar protein 1
chr7	118455184;118472108	118472044;118475465	+	118455184	118475465	cassetteExon	0.5	100	100	ENSMUST00000153518.8	ENSMUSG00000073856.12	Iqck	chr7	protein_coding	IQ motif containing K
chr7	118455184;118472117	118472044;118475465	+	118455184	118475465	cassetteExon	0.5	100	100	ENSMUST00000153518.8	ENSMUSG00000073856.12	Iqck	chr7	protein_coding	IQ motif containing K
chr7	118472108	118475465	+	118472117	118475465	A5SS	0.33	50	50	ENSMUST00000098087.9	ENSMUSG00000073856.12	Iqck	chr7	protein_coding	IQ motif containing K
chr7	118536442	118540808	+	118514818	118540808	A5SS	0.5	50	50	ENSMUST00000098087.9	ENSMUSG00000073856.12	Iqck	chr7	protein_coding	IQ motif containing K
chr7	118572459	118575736	-	118574426	118575736	A3SS	0.5	50	50	ENSMUST00000008878.10	ENSMUSG00000008734.10	Gprc5b	chr7	protein_coding	G protein-coupled receptor, family C, group 5, member B
chr7	119044747;119046424	119046340;119048201	-	119044747	119048201	cassetteExon	0.5	100	100	ENSMUST00000207887.3	ENSMUSG00000030954.12	Gp2	chr7	protein_coding	glycoprotein 2 (zymogen granule membrane)
chr7	119056519	119058408	-	119056519	119058453	A5SS	0.5	50	50	ENSMUST00000207887.3	ENSMUSG00000030954.12	Gp2	chr7	protein_coding	glycoprotein 2 (zymogen granule membrane)
chr7	119077597	119078375	-	119077541	119078375	A3SS	0.5	50	50	ENSMUST00000209095.2	ENSMUSG00000030963.7	Umod	chr7	protein_coding	uromodulin
chr7	119077597	119078222	-	119077597	119078375	A5SS	0.33	50	50	ENSMUST00000033263.6	ENSMUSG00000030963.7	Umod	chr7	protein_coding	uromodulin
chr7	119077597	119078436	-	119077597	119078375	A5SS	0.33	50	50	ENSMUST00000033263.6	ENSMUSG00000030963.7	Umod	chr7	protein_coding	uromodulin
chr7	119077597	119078436	-	119077597	119078222	5pMXE	0.33	50	50	ENSMUST00000207460.2	ENSMUSG00000030963.7	Umod	chr7	protein_coding	uromodulin
chr7	119094340;119095831	119095760;119097181	-	119094340	119097181	cassetteExon	0.5	100	100	ENSMUST00000033267.4	ENSMUSG00000030968.4	Pdilt	chr7	protein_coding	protein disulfide isomerase-like, testis expressed
chr7	119097496	119097946	-	119097496	119099595	A5SS	0.5	50	50	ENSMUST00000033267.4	ENSMUSG00000030968.4	Pdilt	chr7	protein_coding	protein disulfide isomerase-like, testis expressed
chr7	119140133	119141540	+	119140133;119141300	119141203;119141540	ES	0.5	50	50	ENSMUST00000207796.2	ENSMUSG00000030972.7	Acsm5	chr7	protein_coding	acyl-CoA synthetase medium-chain family member 5
chr7	119141659	119141938	+	119141659	119144730	A3SS	0.5	50	50	ENSMUST00000207796.2	ENSMUSG00000030972.7	Acsm5	chr7	protein_coding	acyl-CoA synthetase medium-chain family member 5
chr7	119133637	119133985	+	119133600	119133985	A5SS	0.5	50	50	ENSMUST00000207796.2	ENSMUSG00000030972.7	Acsm5	chr7	protein_coding	acyl-CoA synthetase medium-chain family member 5
chr7	119125660;119126616	119126527;119127642	+	119125660	119127642	cassetteExon	0.5	100	100	ENSMUST00000066465.3	ENSMUSG00000030972.7	Acsm5	chr7	protein_coding	acyl-CoA synthetase medium-chain family member 5
chr7	119172546	119177313	+	119172546	119172775	A3SS&ES	0.5	50	50	ENSMUST00000098084.11	ENSMUSG00000030945.18	Acsm2	chr7	protein_coding	acyl-CoA synthetase medium-chain family member 2
chr7	119190377	119190471	+	119190377	119190486	A3SS	0.5	50	50	ENSMUST00000098084.11	ENSMUSG00000030945.18	Acsm2	chr7	protein_coding	acyl-CoA synthetase medium-chain family member 2
chr7	119161036	119162720	+	119153758	119162720	A5SS	0.5	50	50	ENSMUST00000098084.11	ENSMUSG00000030945.18	Acsm2	chr7	protein_coding	acyl-CoA synthetase medium-chain family member 2
chr7	119190537	119191446	+	119190585	119191446	A5SS	0.5	50	50	ENSMUST00000098084.11	ENSMUSG00000030945.18	Acsm2	chr7	protein_coding	acyl-CoA synthetase medium-chain family member 2
chr7	119161036	119172399	+	119161036	119162720	A3SS&ES	0.5	50	50	ENSMUST00000167935.10	ENSMUSG00000030945.18	Acsm2	chr7	protein_coding	acyl-CoA synthetase medium-chain family member 2
chr7	119217120	119221721	+	119206346	119221721	A5SS	0.5	50	50	ENSMUST00000126367.8	ENSMUSG00000033533.15	Acsm1	chr7	protein_coding	acyl-CoA synthetase medium-chain family member 1
chr7	119253678	119255205	+	119253678;119254719	119254639;119255205	ES	0.5	50	50	ENSMUST00000047929.13	ENSMUSG00000033533.15	Acsm1	chr7	protein_coding	acyl-CoA synthetase medium-chain family member 1
chr7	119210784;119219520	119219448;119230400	-	119210784	119230400	cassetteExon	0.5	100	100	ENSMUST00000208167.2	ENSMUSG00000109093.2	Gm19950	chr7	lncRNA	predicted gene, 19950
chr7	119210784	119211994	-	119210784	119230400	A5SS	0.33	50	50	ENSMUST00000208167.2	ENSMUSG00000109093.2	Gm19950	chr7	lncRNA	predicted gene, 19950
chr7	119210784	119230400	-	119210784	119219448	5pMXE	0.33	50	50	ENSMUST00000207110.2	ENSMUSG00000109093.2	Gm19950	chr7	lncRNA	predicted gene, 19950
chr7	119210784;119212110	119211994;119219448	-	119210784	119219448	cassetteExon	0.5	100	100	ENSMUST00000207110.2	ENSMUSG00000109093.2	Gm19950	chr7	lncRNA	predicted gene, 19950
chr7	119210784;119212113	119211994;119219448	-	119210784	119219448	cassetteExon	0.5	100	100	ENSMUST00000207110.2	ENSMUSG00000109093.2	Gm19950	chr7	lncRNA	predicted gene, 19950
chr7	119212110	119219448	-	119212113	119219448	A3SS	0.33	50	50	ENSMUST00000207060.2	ENSMUSG00000109093.2	Gm19950	chr7	lncRNA	predicted gene, 19950
chr7	119210784	119219448	-	119212110	119219448	3pMXE	0.33	50	50	ENSMUST00000207364.2	ENSMUSG00000109093.2	Gm19950	chr7	lncRNA	predicted gene, 19950
chr7	119360205	119366114	+	119360205;119365797	119365596;119366114	ES	0.33	50	50	ENSMUST00000106528.8	ENSMUSG00000030935.16	Acsm3	chr7	protein_coding	acyl-CoA synthetase medium-chain family member 3
chr7	119360302	119366114	+	119365797	119366114	A5SS&ES	0.33	50	50	ENSMUST00000106528.8	ENSMUSG00000030935.16	Acsm3	chr7	protein_coding	acyl-CoA synthetase medium-chain family member 3
chr7	119360302	119366114	+	119360205	119366114	A5SS	0.33	50	50	ENSMUST00000106527.8	ENSMUSG00000030935.16	Acsm3	chr7	protein_coding	acyl-CoA synthetase medium-chain family member 3
chr7	119360205	119366114	+	119365797	119366114	5pMXE	0.33	50	50	ENSMUST00000106526.2	ENSMUSG00000030935.16	Acsm3	chr7	protein_coding	acyl-CoA synthetase medium-chain family member 3
chr7	119386050	119386957	-	119386050;119386708	119386627;119386957	ES	0.5	50	50	ENSMUST00000106523.8	ENSMUSG00000030929.18	Eri2	chr7	protein_coding	exoribonuclease 2
chr7	119390451	119391654	-	119390451;119391571	119391488;119391654	ES	0.33	50	50	ENSMUST00000106523.8	ENSMUSG00000030929.18	Eri2	chr7	protein_coding	exoribonuclease 2
chr7	119371842	119385962	-	119368115	119385962	A3SS	0.33	50	50	ENSMUST00000106523.8	ENSMUSG00000030929.18	Eri2	chr7	protein_coding	exoribonuclease 2
chr7	119385767	119385962	-	119368115	119385962	A3SS	0.33	50	50	ENSMUST00000106523.8	ENSMUSG00000030929.18	Eri2	chr7	protein_coding	exoribonuclease 2
chr7	119391566	119391654	-	119391571	119391654	A3SS	0.33	50	50	ENSMUST00000106523.8	ENSMUSG00000030929.18	Eri2	chr7	protein_coding	exoribonuclease 2
chr7	119385767	119385962	-	119371842	119385962	A3SS	0.5	50	50	ENSMUST00000063902.14	ENSMUSG00000030929.18	Eri2	chr7	protein_coding	exoribonuclease 2
chr7	119386050	119386957	-	119386708	119386957	A3SS	0.5	50	50	ENSMUST00000125595.8	ENSMUSG00000030929.18	Eri2	chr7	protein_coding	exoribonuclease 2
chr7	119390451	119391654	-	119390451;119391566	119391488;119391654	ES	0.33	50	50	ENSMUST00000033224.14	ENSMUSG00000030929.18	Eri2	chr7	protein_coding	exoribonuclease 2
chr7	119386050	119386957	-	119386050	119386627	A5SS	0.5	50	50	ENSMUST00000133926.2	ENSMUSG00000030929.18	Eri2	chr7	protein_coding	exoribonuclease 2
chr7	119426599	119431894	+	119426599;119427429	119427315;119431894	ES	0.5	50	50	ENSMUST00000033218.15	ENSMUSG00000030924.17	Rexo5	chr7	protein_coding	RNA exonuclease 5
chr7	119433624;119443287	119443071;119447955	+	119433624	119447955	cassetteExon	0.5	100	100	ENSMUST00000033218.15	ENSMUSG00000030924.17	Rexo5	chr7	protein_coding	RNA exonuclease 5
chr7	119423117	119423268	+	119423117	119426526	A3SS	0.5	50	50	ENSMUST00000033218.15	ENSMUSG00000030924.17	Rexo5	chr7	protein_coding	RNA exonuclease 5
chr7	119433624	119442465	+	119433624	119447955	A3SS	0.33	50	50	ENSMUST00000033218.15	ENSMUSG00000030924.17	Rexo5	chr7	protein_coding	RNA exonuclease 5
chr7	119424861	119426526	+	119423117	119426526	A5SS	0.5	50	50	ENSMUST00000033218.15	ENSMUSG00000030924.17	Rexo5	chr7	protein_coding	RNA exonuclease 5
chr7	119426602	119427315	+	119426599	119427315	A5SS	0.5	50	50	ENSMUST00000033218.15	ENSMUSG00000030924.17	Rexo5	chr7	protein_coding	RNA exonuclease 5
chr7	119444724	119447955	+	119433624	119447955	A5SS	0.25	50	50	ENSMUST00000033218.15	ENSMUSG00000030924.17	Rexo5	chr7	protein_coding	RNA exonuclease 5
chr7	119433624	119443071	+	119433624;119442557	119442465;119443071	ES	0.5	50	50	ENSMUST00000106520.9	ENSMUSG00000030924.17	Rexo5	chr7	protein_coding	RNA exonuclease 5
chr7	119443287	119444606	+	119443287;119443669	119443482;119444606	ES	0.5	50	50	ENSMUST00000106520.9	ENSMUSG00000030924.17	Rexo5	chr7	protein_coding	RNA exonuclease 5
chr7	119426599	119431894	+	119427429	119431894	A5SS&ES	0.5	50	50	ENSMUST00000106520.9	ENSMUSG00000030924.17	Rexo5	chr7	protein_coding	RNA exonuclease 5
chr7	119426599	119447955	+	119444724	119447955	A5SS&ES	0.25	50	50	ENSMUST00000106520.9	ENSMUSG00000030924.17	Rexo5	chr7	protein_coding	RNA exonuclease 5
chr7	119443287;119444724	119444606;119447955	+	119443287	119447955	cassetteExon	0.5	100	100	ENSMUST00000133758.9	ENSMUSG00000030924.17	Rexo5	chr7	protein_coding	RNA exonuclease 5
chr7	119393725	119398788	+	119393725	119404366	A3SS	0.5	50	50	ENSMUST00000133758.9	ENSMUSG00000030924.17	Rexo5	chr7	protein_coding	RNA exonuclease 5
chr7	119443287	119443482	+	119443287	119447955	A3SS	0.33	50	50	ENSMUST00000133758.9	ENSMUSG00000030924.17	Rexo5	chr7	protein_coding	RNA exonuclease 5
chr7	119402060	119404366	+	119393725	119404366	A5SS	0.5	50	50	ENSMUST00000133758.9	ENSMUSG00000030924.17	Rexo5	chr7	protein_coding	RNA exonuclease 5
chr7	119426599	119427315	+	119426599	119447955	A3SS	0.33	50	50	ENSMUST00000207042.2	ENSMUSG00000030924.17	Rexo5	chr7	protein_coding	RNA exonuclease 5
chr7	119426599	119431894	+	119426599	119447955	A3SS	0.33	50	50	ENSMUST00000207042.2	ENSMUSG00000030924.17	Rexo5	chr7	protein_coding	RNA exonuclease 5
chr7	119433624	119447955	+	119426599	119447955	A5SS	0.25	50	50	ENSMUST00000207042.2	ENSMUSG00000030924.17	Rexo5	chr7	protein_coding	RNA exonuclease 5
chr7	119443287	119447955	+	119426599	119447955	A5SS	0.25	50	50	ENSMUST00000207042.2	ENSMUSG00000030924.17	Rexo5	chr7	protein_coding	RNA exonuclease 5
chr7	119433624	119447955	+	119433624	119443071	3pMXE	0.33	50	50	ENSMUST00000138689.2	ENSMUSG00000030924.17	Rexo5	chr7	protein_coding	RNA exonuclease 5
chr7	119443287	119444606	+	119443669	119444606	5pMXE	0.5	50	50	ENSMUST00000151248.2	ENSMUSG00000030924.17	Rexo5	chr7	protein_coding	RNA exonuclease 5
chr7	119459138	119495308	-	119459138	119494781	5pMXE	0.2	50	50	ENSMUST00000059851.14	ENSMUSG00000048787.14	Dcun1d3	chr7	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
chr7	119459138	119460970	-	119459138	119494781	A5SS	0.2	50	50	ENSMUST00000059851.14	ENSMUSG00000048787.14	Dcun1d3	chr7	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
chr7	119459138	119461026	-	119459138	119494781	A5SS	0.2	50	50	ENSMUST00000059851.14	ENSMUSG00000048787.14	Dcun1d3	chr7	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
chr7	119459138	119494475	-	119459138	119494781	A5SS	0.2	50	50	ENSMUST00000059851.14	ENSMUSG00000048787.14	Dcun1d3	chr7	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
chr7	119459138	119495308	-	119459138	119494475	5pMXE	0.2	50	50	ENSMUST00000098080.9	ENSMUSG00000048787.14	Dcun1d3	chr7	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
chr7	119459138	119460970	-	119459138	119494475	A5SS	0.2	50	50	ENSMUST00000098080.9	ENSMUSG00000048787.14	Dcun1d3	chr7	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
chr7	119459138	119461026	-	119459138	119494475	A5SS	0.2	50	50	ENSMUST00000098080.9	ENSMUSG00000048787.14	Dcun1d3	chr7	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
chr7	119459138	119460970	-	119459138	119495308	A5SS	0.2	50	50	ENSMUST00000106519.8	ENSMUSG00000048787.14	Dcun1d3	chr7	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
chr7	119459138	119461026	-	119459138	119495308	A5SS	0.2	50	50	ENSMUST00000106519.8	ENSMUSG00000048787.14	Dcun1d3	chr7	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
chr7	119459138	119460970	-	119459138	119461026	A5SS	0.2	50	50	ENSMUST00000142120.2	ENSMUSG00000048787.14	Dcun1d3	chr7	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
chr7	119495113;119499531	119499334;119509027	+	119495113	119509027	cassetteExon	0.5	100	100	ENSMUST00000106518.9	ENSMUSG00000030922.13	Lyrm1	chr7	protein_coding	LYR motif containing 1
chr7	119495113;119499531	119499334;119513396	+	119495113;119509185	119509027;119513396	MXE	0.5	100	100	ENSMUST00000106518.9	ENSMUSG00000030922.13	Lyrm1	chr7	protein_coding	LYR motif containing 1
chr7	119495113	119508894	+	119495113	119509027	A3SS	0.33	50	50	ENSMUST00000106518.9	ENSMUSG00000030922.13	Lyrm1	chr7	protein_coding	LYR motif containing 1
chr7	119536383	119550769	+	119515508	119550769	A5SS	0.5	50	50	ENSMUST00000207270.2	ENSMUSG00000030922.13	Lyrm1	chr7	protein_coding	LYR motif containing 1
chr7	119499531	119513396	+	119499531;119509185	119509027;119513396	ES	0.5	50	50	ENSMUST00000208424.2	ENSMUSG00000030922.13	Lyrm1	chr7	protein_coding	LYR motif containing 1
chr7	119495113	119508894	+	119495113	119499334	A3SS&ES	0.33	50	50	ENSMUST00000208424.2	ENSMUSG00000030922.13	Lyrm1	chr7	protein_coding	LYR motif containing 1
chr7	119495113;119499531	119499334;119513396	+	119495113;119509185	119508894;119513396	MXE	0.5	100	100	ENSMUST00000208202.2	ENSMUSG00000030922.13	Lyrm1	chr7	protein_coding	LYR motif containing 1
chr7	119495795	119508894	+	119495113	119508894	A5SS	0.5	50	50	ENSMUST00000208202.2	ENSMUSG00000030922.13	Lyrm1	chr7	protein_coding	LYR motif containing 1
chr7	119499531	119513396	+	119509185	119513396	A5SS&ES	0.5	50	50	ENSMUST00000106517.9	ENSMUSG00000030922.13	Lyrm1	chr7	protein_coding	LYR motif containing 1
chr7	119495113	119509027	+	119499531	119509027	5pMXE	0.5	50	50	ENSMUST00000106516.2	ENSMUSG00000030922.13	Lyrm1	chr7	protein_coding	LYR motif containing 1
chr7	119672967	119676995	-	119675779	119676995	A3SS&ES	0.5	50	50	ENSMUST00000213149.2	ENSMUSG00000052273.5	Dnah3	chr7	protein_coding	dynein, axonemal, heavy chain 3
chr7	119686015	119689085	-	119686006	119689085	A3SS	0.5	50	50	ENSMUST00000213149.2	ENSMUSG00000052273.5	Dnah3	chr7	protein_coding	dynein, axonemal, heavy chain 3
chr7	119608650	119610095	-	119608650	119610065	A5SS	0.5	50	50	ENSMUST00000213149.2	ENSMUSG00000052273.5	Dnah3	chr7	protein_coding	dynein, axonemal, heavy chain 3
chr7	119668927	119670126	-	119668927	119670130	A5SS	0.5	50	50	ENSMUST00000213149.2	ENSMUSG00000052273.5	Dnah3	chr7	protein_coding	dynein, axonemal, heavy chain 3
chr7	119686006	119689079	-	119686006	119689085	A5SS	0.5	50	50	ENSMUST00000213149.2	ENSMUSG00000052273.5	Dnah3	chr7	protein_coding	dynein, axonemal, heavy chain 3
chr7	119701738;119702179	119702138;119703853	+	119701738	119703853	cassetteExon	0.5	100	100	ENSMUST00000033210.13	ENSMUSG00000030917.14	Tmem159	chr7	protein_coding	transmembrane protein 159
chr7	119701738	119703853	+	119702179	119703853	5pMXE	0.5	50	50	ENSMUST00000208968.2	ENSMUSG00000030917.14	Tmem159	chr7	protein_coding	transmembrane protein 159
chr7	119731769	119732561	-	119726214	119732561	A3SS	0.5	50	50	ENSMUST00000208874.2	ENSMUSG00000030911.8	Zp2	chr7	protein_coding	zona pellucida glycoprotein 2
chr7	119741204	119742127	-	119741204	119742813	A5SS	0.5	50	50	ENSMUST00000208874.2	ENSMUSG00000030911.8	Zp2	chr7	protein_coding	zona pellucida glycoprotein 2
chr7	119810860	119815352	+	119810860;119812018	119811859;119815352	ES	0.5	50	50	ENSMUST00000143257.8	ENSMUSG00000062017.16	Abca14	chr7	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 14
chr7	119815611	119822748	+	119815611;119821625	119821518;119822748	ES	0.5	50	50	ENSMUST00000143257.8	ENSMUSG00000062017.16	Abca14	chr7	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 14
chr7	119847370	119850383	+	119847370	119847616	3pMXE	0.5	50	50	ENSMUST00000143257.8	ENSMUSG00000062017.16	Abca14	chr7	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 14
chr7	119810860	119815352	+	119810860	119811859	3pMXE	0.5	50	50	ENSMUST00000130646.8	ENSMUSG00000062017.16	Abca14	chr7	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 14
chr7	120038565	120052182	+	120038565	120052180	A3SS	0.5	50	50	ENSMUST00000144122.8	ENSMUSG00000051900.13	Abca16	chr7	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 16
chr7	120026480	120030331	+	120008989	120030331	A5SS	0.5	50	50	ENSMUST00000144122.8	ENSMUSG00000051900.13	Abca16	chr7	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 16
chr7	120035990	120038392	+	120035175	120038392	A5SS	0.5	50	50	ENSMUST00000144122.8	ENSMUSG00000051900.13	Abca16	chr7	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 16
chr7	120236968	120239457	+	120236968;120237220	120237071;120239457	ES	0.5	50	50	ENSMUST00000033176.7	ENSMUSG00000030884.13	Uqcrc2	chr7	protein_coding	ubiquinol cytochrome c reductase core protein 2
chr7	120234545;120234817	120234652;120236885	+	120234545	120236885	cassetteExon	0.5	100	100	ENSMUST00000033176.7	ENSMUSG00000030884.13	Uqcrc2	chr7	protein_coding	ubiquinol cytochrome c reductase core protein 2
chr7	120234545	120236885	+	120234817	120236885	5pMXE	0.5	50	50	ENSMUST00000123704.9	ENSMUSG00000030884.13	Uqcrc2	chr7	protein_coding	ubiquinol cytochrome c reductase core protein 2
chr7	120259585	120267603	-	120259585;120262249	120262060;120267603	ES	0.33	50	50	ENSMUST00000033178.4	ENSMUSG00000030887.5	Pdzd9	chr7	protein_coding	PDZ domain containing 9
chr7	120262112	120267603	-	120262249	120267603	A3SS	0.33	50	50	ENSMUST00000033178.4	ENSMUSG00000030887.5	Pdzd9	chr7	protein_coding	PDZ domain containing 9
chr7	120259585	120267603	-	120259585;120262112	120262060;120267603	ES	0.33	50	50	ENSMUST00000127845.2	ENSMUSG00000030887.5	Pdzd9	chr7	protein_coding	PDZ domain containing 9
chr7	120274499	120276524	-	120274499;120275879	120275631;120276524	ES	0.5	50	50	ENSMUST00000180933.3	ENSMUSG00000097343.3	9030407P20Rik	chr7	lncRNA	RIKEN cDNA 9030407P20 gene
chr7	120274499	120276524	-	120274499	120275631	5pMXE	0.5	50	50	ENSMUST00000207861.2	ENSMUSG00000097343.3	9030407P20Rik	chr7	lncRNA	RIKEN cDNA 9030407P20 gene
chr7	120277093	120325343	+	120277093;120324641	120324458;120325343	ES	0.25	50	50	ENSMUST00000207065.2	ENSMUSG00000046096.8	Mosmo	chr7	protein_coding	modulator of smoothened
chr7	120325555	120331588	+	120325555	120329700	3pMXE	0.5	50	50	ENSMUST00000207065.2	ENSMUSG00000046096.8	Mosmo	chr7	protein_coding	modulator of smoothened
chr7	120315997	120325343	+	120324641	120325343	A5SS&ES	0.25	50	50	ENSMUST00000207065.2	ENSMUSG00000046096.8	Mosmo	chr7	protein_coding	modulator of smoothened
chr7	120316790	120325343	+	120324641	120325343	A5SS&ES	0.25	50	50	ENSMUST00000207065.2	ENSMUSG00000046096.8	Mosmo	chr7	protein_coding	modulator of smoothened
chr7	120315997	120325343	+	120277093	120325343	A5SS	0.25	50	50	ENSMUST00000208454.2	ENSMUSG00000046096.8	Mosmo	chr7	protein_coding	modulator of smoothened
chr7	120316790	120325343	+	120277093	120325343	A5SS	0.25	50	50	ENSMUST00000208454.2	ENSMUSG00000046096.8	Mosmo	chr7	protein_coding	modulator of smoothened
chr7	120316790	120325343	+	120315997	120325343	A5SS	0.33	50	50	ENSMUST00000208319.2	ENSMUSG00000046096.8	Mosmo	chr7	protein_coding	modulator of smoothened
chr7	120383387	120389278	+	120383387;120385717	120385647;120389278	ES	0.5	50	50	ENSMUST00000168600.9	ENSMUSG00000030889.15	Vwa3a	chr7	protein_coding	von Willebrand factor A domain containing 3A
chr7	120381957	120383192	+	120381957	120382442	A3SS&ES	0.5	50	50	ENSMUST00000168600.9	ENSMUSG00000030889.15	Vwa3a	chr7	protein_coding	von Willebrand factor A domain containing 3A
chr7	120403762	120404142	+	120403762	120404120	A3SS	0.5	50	50	ENSMUST00000033180.13	ENSMUSG00000030889.15	Vwa3a	chr7	protein_coding	von Willebrand factor A domain containing 3A
chr7	120383387	120389278	+	120385717	120389278	5pMXE	0.5	50	50	ENSMUST00000166083.2	ENSMUSG00000030889.15	Vwa3a	chr7	protein_coding	von Willebrand factor A domain containing 3A
chr7	120498769	120499484	+	120498769	120502505	A3SS	0.5	50	50	ENSMUST00000047875.16	ENSMUSG00000035064.18	Eef2k	chr7	protein_coding	eukaryotic elongation factor-2 kinase
chr7	120443008	120457567	+	120442323	120457567	A5SS	0.2	50	50	ENSMUST00000047875.16	ENSMUSG00000035064.18	Eef2k	chr7	protein_coding	eukaryotic elongation factor-2 kinase
chr7	120444012	120457567	+	120442323	120457567	A5SS	0.2	50	50	ENSMUST00000047875.16	ENSMUSG00000035064.18	Eef2k	chr7	protein_coding	eukaryotic elongation factor-2 kinase
chr7	120450509	120457567	+	120442323	120457567	A5SS	0.2	50	50	ENSMUST00000047875.16	ENSMUSG00000035064.18	Eef2k	chr7	protein_coding	eukaryotic elongation factor-2 kinase
chr7	120450592	120457567	+	120442323	120457567	A5SS	0.2	50	50	ENSMUST00000047875.16	ENSMUSG00000035064.18	Eef2k	chr7	protein_coding	eukaryotic elongation factor-2 kinase
chr7	120443008	120457567	+	120443008;120444012	120443919;120457567	ES	0.25	50	50	ENSMUST00000143279.3	ENSMUSG00000035064.18	Eef2k	chr7	protein_coding	eukaryotic elongation factor-2 kinase
chr7	120450509	120457567	+	120444012	120457567	A5SS	0.25	50	50	ENSMUST00000143279.3	ENSMUSG00000035064.18	Eef2k	chr7	protein_coding	eukaryotic elongation factor-2 kinase
chr7	120450592	120457567	+	120444012	120457567	A5SS	0.25	50	50	ENSMUST00000143279.3	ENSMUSG00000035064.18	Eef2k	chr7	protein_coding	eukaryotic elongation factor-2 kinase
chr7	120450509	120457567	+	120443008	120457567	A5SS	0.2	50	50	ENSMUST00000106489.9	ENSMUSG00000035064.18	Eef2k	chr7	protein_coding	eukaryotic elongation factor-2 kinase
chr7	120450592	120457567	+	120443008	120457567	A5SS	0.2	50	50	ENSMUST00000106489.9	ENSMUSG00000035064.18	Eef2k	chr7	protein_coding	eukaryotic elongation factor-2 kinase
chr7	120450592	120457567	+	120450509	120457567	A5SS	0.2	50	50	ENSMUST00000143322.9	ENSMUSG00000035064.18	Eef2k	chr7	protein_coding	eukaryotic elongation factor-2 kinase
chr7	120488974;120491276	120490819;120494407	+	120488974	120494407	cassetteExon	0.5	100	100	ENSMUST00000146482.3	ENSMUSG00000035064.18	Eef2k	chr7	protein_coding	eukaryotic elongation factor-2 kinase
chr7	120488974	120494407	+	120491276	120494407	5pMXE	0.5	50	50	ENSMUST00000128813.2	ENSMUSG00000035064.18	Eef2k	chr7	protein_coding	eukaryotic elongation factor-2 kinase
chr7	120523495;120526244	120526167;120527111	+	120523495	120527111	cassetteExon	0.5	100	100	ENSMUST00000207481.2	ENSMUSG00000030880.15	Polr3e	chr7	protein_coding	polymerase (RNA) III (DNA directed) polypeptide E
chr7	120569661	120580757	-	120569661	120581200	A5SS	0.5	50	50	ENSMUST00000033169.9	ENSMUSG00000030878.12	Cdr2	chr7	protein_coding	cerebellar degeneration-related 2
chr7	120594757	120599318	+	120594757;120598207	120598124;120599318	ES	0.5	50	50	ENSMUST00000033166.10	ENSMUSG00000030877.12	Mfsd13b	chr7	protein_coding	major facilitator superfamily domain containing 13B
chr7	120581953;120586716	120586691;120588183	+	120581953;120585616	120585485;120588183	MXE	0.5	100	100	ENSMUST00000033166.10	ENSMUSG00000030877.12	Mfsd13b	chr7	protein_coding	major facilitator superfamily domain containing 13B
chr7	120599440	120613740	+	120599440	120613743	A3SS	0.5	50	50	ENSMUST00000033166.10	ENSMUSG00000030877.12	Mfsd13b	chr7	protein_coding	major facilitator superfamily domain containing 13B
chr7	120581916	120588183	+	120585616	120588183	A5SS&ES	0.25	50	50	ENSMUST00000033166.10	ENSMUSG00000030877.12	Mfsd13b	chr7	protein_coding	major facilitator superfamily domain containing 13B
chr7	120587644	120588183	+	120585616	120588183	A5SS	0.25	50	50	ENSMUST00000033166.10	ENSMUSG00000030877.12	Mfsd13b	chr7	protein_coding	major facilitator superfamily domain containing 13B
chr7	120586716	120588183	+	120581916	120588183	A5SS	0.25	50	50	ENSMUST00000149535.2	ENSMUSG00000030877.12	Mfsd13b	chr7	protein_coding	major facilitator superfamily domain containing 13B
chr7	120587644	120588183	+	120581916	120588183	A5SS	0.25	50	50	ENSMUST00000149535.2	ENSMUSG00000030877.12	Mfsd13b	chr7	protein_coding	major facilitator superfamily domain containing 13B
chr7	120586716;120587644	120587586;120588183	+	120586716	120588183	cassetteExon	0.5	100	100	ENSMUST00000138177.2	ENSMUSG00000030877.12	Mfsd13b	chr7	protein_coding	major facilitator superfamily domain containing 13B
chr7	120581953;120585616	120585485;120588183	+	120581953;120587644	120586691;120588183	MXE	0.5	100	100	ENSMUST00000216241.2	ENSMUSG00000030877.12	Mfsd13b	chr7	protein_coding	major facilitator superfamily domain containing 13B
chr7	120634899	120647061	+	120634198	120647061	A5SS	0.33	50	50	ENSMUST00000033163.8	ENSMUSG00000030876.8	Mettl9	chr7	protein_coding	methyltransferase like 9
chr7	120635024	120647061	+	120634198	120647061	A5SS	0.33	50	50	ENSMUST00000033163.8	ENSMUSG00000030876.8	Mettl9	chr7	protein_coding	methyltransferase like 9
chr7	120634899	120647061	+	120635024	120647061	A5SS	0.33	50	50	ENSMUST00000207332.2	ENSMUSG00000030876.8	Mettl9	chr7	protein_coding	methyltransferase like 9
chr7	120682721	120689943	+	120682736	120689943	A5SS	0.5	50	50	ENSMUST00000171880.3	ENSMUSG00000034990.16	Otoa	chr7	protein_coding	otoancorin
chr7	120682721	120690766	+	120690573	120690766	A5SS&ES	0.33	50	50	ENSMUST00000171880.3	ENSMUSG00000034990.16	Otoa	chr7	protein_coding	otoancorin
chr7	120682736	120689943	+	120682736	120690766	A3SS	0.5	50	50	ENSMUST00000047025.15	ENSMUSG00000034990.16	Otoa	chr7	protein_coding	otoancorin
chr7	120682721	120690766	+	120682736	120690766	A5SS	0.33	50	50	ENSMUST00000047025.15	ENSMUSG00000034990.16	Otoa	chr7	protein_coding	otoancorin
chr7	120690573	120690766	+	120682736	120690766	A5SS	0.33	50	50	ENSMUST00000047025.15	ENSMUSG00000034990.16	Otoa	chr7	protein_coding	otoancorin
chr7	120717637	120717765	+	120713832	120717765	A5SS	0.5	50	50	ENSMUST00000047025.15	ENSMUSG00000034990.16	Otoa	chr7	protein_coding	otoancorin
chr7	120682721	120689943	+	120682721	120690766	A3SS	0.5	50	50	ENSMUST00000170106.2	ENSMUSG00000034990.16	Otoa	chr7	protein_coding	otoancorin
chr7	120992437	121099641	+	120992437	120996577	3pMXE	0.5	50	50	ENSMUST00000206880.2	ENSMUSG00000046321.9	Hs3st2	chr7	protein_coding	heparan sulfate (glucosamine) 3-O-sulfotransferase 2
chr7	121163547	121188434	-	121091957	121188434	A3SS	0.5	50	50	ENSMUST00000205739.2	ENSMUSG00000108811.2	4933432K03Rik	chr7	lncRNA	RIKEN cDNA 4933432K03 gene
chr7	121515810	121516573	+	121515810	121516723	A3SS	0.5	50	50	ENSMUST00000033161.7	ENSMUSG00000030873.10	Scnn1b	chr7	protein_coding	sodium channel, nonvoltage-gated 1 beta
chr7	121498772	121501498	+	121498772	121509623	A3SS	0.5	50	50	ENSMUST00000206079.2	ENSMUSG00000030873.10	Scnn1b	chr7	protein_coding	sodium channel, nonvoltage-gated 1 beta
chr7	121502113	121509623	+	121498772	121509623	A5SS	0.5	50	50	ENSMUST00000206079.2	ENSMUSG00000030873.10	Scnn1b	chr7	protein_coding	sodium channel, nonvoltage-gated 1 beta
chr7	121529836;121531424	121531276;121534881	-	121529836	121534881	cassetteExon	0.5	100	100	ENSMUST00000205438.2	ENSMUSG00000034951.11	Cog7	chr7	protein_coding	component of oligomeric golgi complex 7
chr7	121522691	121524647	-	121480338	121524647	A3SS	0.5	50	50	ENSMUST00000205438.2	ENSMUSG00000034951.11	Cog7	chr7	protein_coding	component of oligomeric golgi complex 7
chr7	121639070	121643525	-	121639119	121643525	A3SS	0.5	50	50	ENSMUST00000151530.8	ENSMUSG00000030871.12	Ears2	chr7	protein_coding	glutamyl-tRNA synthetase 2, mitochondrial
chr7	121671238;121673780	121673690;121675331	+	121671238	121675331	cassetteExon	0.5	100	100	ENSMUST00000033158.6	ENSMUSG00000030870.13	Ubfd1	chr7	protein_coding	ubiquitin family domain containing 1
chr7	121666707	121666844	+	121666707	121666887	A3SS	0.5	50	50	ENSMUST00000033158.6	ENSMUSG00000030870.13	Ubfd1	chr7	protein_coding	ubiquitin family domain containing 1
chr7	121687829	121690809	-	121687561	121690809	A3SS	0.25	50	50	ENSMUST00000033157.10	ENSMUSG00000030869.12	Ndufab1	chr7	protein_coding	NADH:ubiquinone oxidoreductase subunit AB1
chr7	121690186	121690809	-	121687561	121690809	A3SS	0.25	50	50	ENSMUST00000033157.10	ENSMUSG00000030869.12	Ndufab1	chr7	protein_coding	NADH:ubiquinone oxidoreductase subunit AB1
chr7	121690212	121690809	-	121687561	121690809	A3SS	0.25	50	50	ENSMUST00000033157.10	ENSMUSG00000030869.12	Ndufab1	chr7	protein_coding	NADH:ubiquinone oxidoreductase subunit AB1
chr7	121693272	121695832	-	121692927	121695832	A3SS	0.5	50	50	ENSMUST00000033157.10	ENSMUSG00000030869.12	Ndufab1	chr7	protein_coding	NADH:ubiquinone oxidoreductase subunit AB1
chr7	121695954	121700451	-	121695954	121700878	A5SS	0.5	50	50	ENSMUST00000033157.10	ENSMUSG00000030869.12	Ndufab1	chr7	protein_coding	NADH:ubiquinone oxidoreductase subunit AB1
chr7	121690186	121690809	-	121687829	121690809	A3SS	0.25	50	50	ENSMUST00000146964.2	ENSMUSG00000030869.12	Ndufab1	chr7	protein_coding	NADH:ubiquinone oxidoreductase subunit AB1
chr7	121690212	121690809	-	121687829	121690809	A3SS	0.25	50	50	ENSMUST00000146964.2	ENSMUSG00000030869.12	Ndufab1	chr7	protein_coding	NADH:ubiquinone oxidoreductase subunit AB1
chr7	121690212	121690809	-	121690186	121690809	A3SS	0.25	50	50	ENSMUST00000123296.8	ENSMUSG00000030869.12	Ndufab1	chr7	protein_coding	NADH:ubiquinone oxidoreductase subunit AB1
chr7	121727666	121728897	-	121727666;121728239	121728146;121728897	ES	0.33	50	50	ENSMUST00000106469.8	ENSMUSG00000044702.14	Palb2	chr7	protein_coding	partner and localizer of BRCA2
chr7	121710993	121711168	-	121710053	121711168	A3SS	0.5	50	50	ENSMUST00000106469.8	ENSMUSG00000044702.14	Palb2	chr7	protein_coding	partner and localizer of BRCA2
chr7	121722931	121723617	-	121722931	121723480	A5SS	0.33	50	50	ENSMUST00000106469.8	ENSMUSG00000044702.14	Palb2	chr7	protein_coding	partner and localizer of BRCA2
chr7	121724150	121726272	-	121724150	121727361	A5SS	0.5	50	50	ENSMUST00000106469.8	ENSMUSG00000044702.14	Palb2	chr7	protein_coding	partner and localizer of BRCA2
chr7	121727666	121728897	-	121722931	121728897	A3SS	0.33	50	50	ENSMUST00000063587.13	ENSMUSG00000044702.14	Palb2	chr7	protein_coding	partner and localizer of BRCA2
chr7	121728239	121728897	-	121722931	121728897	A3SS	0.33	50	50	ENSMUST00000063587.13	ENSMUSG00000044702.14	Palb2	chr7	protein_coding	partner and localizer of BRCA2
chr7	121722931	121723480	-	121722931	121728897	A5SS	0.33	50	50	ENSMUST00000063587.13	ENSMUSG00000044702.14	Palb2	chr7	protein_coding	partner and localizer of BRCA2
chr7	121722931	121723617	-	121722931	121728897	A5SS	0.33	50	50	ENSMUST00000063587.13	ENSMUSG00000044702.14	Palb2	chr7	protein_coding	partner and localizer of BRCA2
chr7	121743110;121745301	121745172;121747280	+	121743110	121747280	cassetteExon	0.5	100	100	ENSMUST00000033156.5	ENSMUSG00000030868.7	Dctn5	chr7	protein_coding	dynactin 5
chr7	121732558	121733392	+	121732404	121733392	A5SS	0.5	50	50	ENSMUST00000033156.5	ENSMUSG00000030868.7	Dctn5	chr7	protein_coding	dynactin 5
chr7	121759927	121761616	+	121759927;121760874	121760730;121761616	ES	0.5	50	50	ENSMUST00000033154.8	ENSMUSG00000030867.8	Plk1	chr7	protein_coding	polo like kinase 1
chr7	121773286	121775412	-	121773283	121775412	A3SS	0.5	50	50	ENSMUST00000206198.2	ENSMUSG00000030866.9	Ern2	chr7	protein_coding	endoplasmic reticulum (ER) to nucleus signalling 2
chr7	121769644	121769724	-	121769644	121769728	A5SS	0.5	50	50	ENSMUST00000206198.2	ENSMUSG00000030866.9	Ern2	chr7	protein_coding	endoplasmic reticulum (ER) to nucleus signalling 2
chr7	121820942	121821055	+	121820386	121821055	A5SS	0.5	50	50	ENSMUST00000033152.5	ENSMUSG00000030865.5	Chp2	chr7	protein_coding	calcineurin-like EF hand protein 2
chr7	122200053	122232968	+	122200053;122227094	122226879;122232968	ES	0.5	50	50	ENSMUST00000143692.8	ENSMUSG00000052889.12	Prkcb	chr7	protein_coding	protein kinase C, beta
chr7	121889544	121889736	+	121888740	121889736	A5SS	0.5	50	50	ENSMUST00000143692.8	ENSMUSG00000052889.12	Prkcb	chr7	protein_coding	protein kinase C, beta
chr7	122015424	122024182	+	121889767	122024182	A5SS	0.5	50	50	ENSMUST00000143692.8	ENSMUSG00000052889.12	Prkcb	chr7	protein_coding	protein kinase C, beta
chr7	122199410	122199913	+	122194296	122199913	A5SS	0.5	50	50	ENSMUST00000143692.8	ENSMUSG00000052889.12	Prkcb	chr7	protein_coding	protein kinase C, beta
chr7	122200053	122232968	+	122200053	122226879	3pMXE	0.5	50	50	ENSMUST00000064989.12	ENSMUSG00000052889.12	Prkcb	chr7	protein_coding	protein kinase C, beta
chr7	122271207	122361406	+	122271207;122353812	122353729;122361406	ES	0.5	50	50	ENSMUST00000084615.10	ENSMUSG00000066189.10	Cacng3	chr7	protein_coding	calcium channel, voltage-dependent, gamma subunit 3
chr7	122353812	122367558	+	122353812;122361546	122361406;122367558	ES	0.5	50	50	ENSMUST00000084615.10	ENSMUSG00000066189.10	Cacng3	chr7	protein_coding	calcium channel, voltage-dependent, gamma subunit 3
chr7	122271207;122361546	122361406;122367558	+	122271207;122353812	122353729;122367558	MXE	0.5	100	100	ENSMUST00000182563.2	ENSMUSG00000066189.10	Cacng3	chr7	protein_coding	calcium channel, voltage-dependent, gamma subunit 3
chr7	122596528	122597748	+	122596528;122596920	122596819;122597748	ES	0.5	50	50	ENSMUST00000052135.14	ENSMUSG00000030779.17	Rbbp6	chr7	protein_coding	retinoblastoma binding protein 6, ubiquitin ligase
chr7	122585022;122586952	122586839;122587825	+	122585022	122587825	cassetteExon	0.5	100	100	ENSMUST00000052135.14	ENSMUSG00000030779.17	Rbbp6	chr7	protein_coding	retinoblastoma binding protein 6, ubiquitin ligase
chr7	122661021	122665263	+	122661021	122768759	A3SS	0.5	50	50	ENSMUST00000211170.2	ENSMUSG00000110230.2	Gm45846	chr7	lncRNA	predicted gene 45846
chr7	122762100	122768759	+	122661021	122768759	A5SS	0.5	50	50	ENSMUST00000211170.2	ENSMUSG00000110230.2	Gm45846	chr7	lncRNA	predicted gene 45846
chr7	122723938;122743060	122742973;122751387	+	122723938	122751387	cassetteExon	0.5	100	100	ENSMUST00000206458.2	ENSMUSG00000052707.9	Tnrc6a	chr7	protein_coding	trinucleotide repeat containing 6a
chr7	122723938;122743060	122742973;122761717	+	122723938;122751408	122751387;122761717	MXE	0.5	100	100	ENSMUST00000206458.2	ENSMUSG00000052707.9	Tnrc6a	chr7	protein_coding	trinucleotide repeat containing 6a
chr7	122723938	122751387	+	122723938	122742973	A3SS&ES	0.5	50	50	ENSMUST00000205514.2	ENSMUSG00000052707.9	Tnrc6a	chr7	protein_coding	trinucleotide repeat containing 6a
chr7	122743060	122751387	+	122743060	122793145	A3SS	0.33	50	50	ENSMUST00000205514.2	ENSMUSG00000052707.9	Tnrc6a	chr7	protein_coding	trinucleotide repeat containing 6a
chr7	122743060	122761717	+	122743060	122793145	A3SS	0.33	50	50	ENSMUST00000205514.2	ENSMUSG00000052707.9	Tnrc6a	chr7	protein_coding	trinucleotide repeat containing 6a
chr7	122743060	122761717	+	122743060;122751408	122751387;122761717	ES	0.5	50	50	ENSMUST00000094053.7	ENSMUSG00000052707.9	Tnrc6a	chr7	protein_coding	trinucleotide repeat containing 6a
chr7	122773542	122776047	+	122773542;122774681	122774649;122776047	ES	0.5	50	50	ENSMUST00000094053.7	ENSMUSG00000052707.9	Tnrc6a	chr7	protein_coding	trinucleotide repeat containing 6a
chr7	122779082;122779618	122779472;122779763	+	122779082	122779763	cassetteExon	0.5	100	100	ENSMUST00000094053.7	ENSMUSG00000052707.9	Tnrc6a	chr7	protein_coding	trinucleotide repeat containing 6a
chr7	122814220	122832211	+	122814220;122828214	122828132;122832211	ES	0.5	50	50	ENSMUST00000131933.8	ENSMUSG00000030769.16	Slc5a11	chr7	protein_coding	solute carrier family 5 (sodium/glucose cotransporter), member 11
chr7	122834977	122838592	+	122834977;122837418	122837347;122838592	ES	0.5	50	50	ENSMUST00000131933.8	ENSMUSG00000030769.16	Slc5a11	chr7	protein_coding	solute carrier family 5 (sodium/glucose cotransporter), member 11
chr7	122814220;122820111	122819916;122828132	+	122814220	122828132	cassetteExon	0.5	100	100	ENSMUST00000131933.8	ENSMUSG00000030769.16	Slc5a11	chr7	protein_coding	solute carrier family 5 (sodium/glucose cotransporter), member 11
chr7	122864519	122864880	+	122864519	122864810	A3SS	0.5	50	50	ENSMUST00000131933.8	ENSMUSG00000030769.16	Slc5a11	chr7	protein_coding	solute carrier family 5 (sodium/glucose cotransporter), member 11
chr7	122839570	122839962	+	122838696	122839962	A5SS	0.5	50	50	ENSMUST00000131933.8	ENSMUSG00000030769.16	Slc5a11	chr7	protein_coding	solute carrier family 5 (sodium/glucose cotransporter), member 11
chr7	122814220	122819916	+	122814220	122832211	A3SS	0.33	50	50	ENSMUST00000033035.13	ENSMUSG00000030769.16	Slc5a11	chr7	protein_coding	solute carrier family 5 (sodium/glucose cotransporter), member 11
chr7	122814220	122832211	+	122828214	122832211	5pMXE	0.5	50	50	ENSMUST00000131461.3	ENSMUSG00000030769.16	Slc5a11	chr7	protein_coding	solute carrier family 5 (sodium/glucose cotransporter), member 11
chr7	122879339	122885721	-	122879339;122884690	122884643;122885721	ES	0.33	50	50	ENSMUST00000207010.2	ENSMUSG00000030766.16	Arhgap17	chr7	protein_coding	Rho GTPase activating protein 17
chr7	122907636	122913867	-	122907636;122913718	122913637;122913867	ES	0.5	50	50	ENSMUST00000207010.2	ENSMUSG00000030766.16	Arhgap17	chr7	protein_coding	Rho GTPase activating protein 17
chr7	122926566	122968977	-	122926566;122930488	122930449;122968977	ES	0.5	50	50	ENSMUST00000207010.2	ENSMUSG00000030766.16	Arhgap17	chr7	protein_coding	Rho GTPase activating protein 17
chr7	122879339;122883048	122883000;122885721	-	122879339;122884690	122884643;122885721	MXE	0.5	100	100	ENSMUST00000207010.2	ENSMUSG00000030766.16	Arhgap17	chr7	protein_coding	Rho GTPase activating protein 17
chr7	122891428;122893928	122893695;122895633	-	122891428	122895633	cassetteExon	0.5	100	100	ENSMUST00000207010.2	ENSMUSG00000030766.16	Arhgap17	chr7	protein_coding	Rho GTPase activating protein 17
chr7	122879339;122883048	122883000;122885721	-	122879339	122885721	cassetteExon	0.5	100	100	ENSMUST00000106442.9	ENSMUSG00000030766.16	Arhgap17	chr7	protein_coding	Rho GTPase activating protein 17
chr7	122977478	122999661	+	122969245	122999661	A5SS	0.5	50	50	ENSMUST00000206721.2	ENSMUSG00000030763.8	Lcmt1	chr7	protein_coding	leucine carboxyl methyltransferase 1
chr7	123007658	123009947	+	123003707	123009947	A5SS	0.5	50	50	ENSMUST00000033025.7	ENSMUSG00000030763.8	Lcmt1	chr7	protein_coding	leucine carboxyl methyltransferase 1
chr7	123061681	123061794	+	123061681	123061797	A3SS	0.5	50	50	ENSMUST00000033023.10	ENSMUSG00000030762.12	Aqp8	chr7	protein_coding	aquaporin 8
chr7	123063064	123063412	+	123062041	123063412	A5SS	0.5	50	50	ENSMUST00000033023.10	ENSMUSG00000030762.12	Aqp8	chr7	protein_coding	aquaporin 8
chr7	123079995;123081907	123081864;123084163	-	123079995	123084163	cassetteExon	0.5	100	100	ENSMUST00000042470.14	ENSMUSG00000030757.14	Zkscan2	chr7	protein_coding	zinc finger with KRAB and SCAN domains 2
chr7	123566243	123567353	-	123558469	123567353	A3SS	0.5	50	50	ENSMUST00000183263.2	ENSMUSG00000098160.4	Gm26974	chr7	lncRNA	predicted gene, 26974
chr7	124933698	124944772	-	124933698	124937378	5pMXE	0.33	50	50	ENSMUST00000205794.2	ENSMUSG00000045928.3	4933440M02Rik	chr7	lncRNA	RIKEN cDNA 4933440M02 gene
chr7	124933698	124948698	-	124933698	124937378	5pMXE	0.33	50	50	ENSMUST00000205794.2	ENSMUSG00000045928.3	4933440M02Rik	chr7	lncRNA	RIKEN cDNA 4933440M02 gene
chr7	124933698;124944840	124944772;124948698	-	124933698	124948698	cassetteExon	0.5	100	100	ENSMUST00000061823.3	ENSMUSG00000045928.3	4933440M02Rik	chr7	lncRNA	RIKEN cDNA 4933440M02 gene
chr7	125043964	125054263	+	125043964;125051900	125051400;125054263	ES	0.5	50	50	ENSMUST00000033010.9	ENSMUSG00000030752.9	Kdm8	chr7	protein_coding	lysine (K)-specific demethylase 8
chr7	125071401	125077627	-	125071401	125085510	A5SS	0.5	50	50	ENSMUST00000033006.14	ENSMUSG00000030750.14	Nsmce1	chr7	protein_coding	NSE1 homolog, SMC5-SMC6 complex component
chr7	125085656	125090468	-	125085656	125090585	A5SS	0.5	50	50	ENSMUST00000033006.14	ENSMUSG00000030750.14	Nsmce1	chr7	protein_coding	NSE1 homolog, SMC5-SMC6 complex component
chr7	125151500	125164809	+	125151500;125163899	125163724;125164809	ES	0.33	50	50	ENSMUST00000033004.8	ENSMUSG00000030748.10	Il4ra	chr7	protein_coding	interleukin 4 receptor, alpha
chr7	125151500;125162544	125162498;125163724	+	125151500	125163724	cassetteExon	0.5	100	100	ENSMUST00000033004.8	ENSMUSG00000030748.10	Il4ra	chr7	protein_coding	interleukin 4 receptor, alpha
chr7	125170762;125171219	125171106;125172023	+	125170762	125172023	cassetteExon	0.5	100	100	ENSMUST00000033004.8	ENSMUSG00000030748.10	Il4ra	chr7	protein_coding	interleukin 4 receptor, alpha
chr7	125163908	125164809	+	125163899	125164809	A5SS	0.33	50	50	ENSMUST00000033004.8	ENSMUSG00000030748.10	Il4ra	chr7	protein_coding	interleukin 4 receptor, alpha
chr7	125151500;125163908	125163724;125164809	+	125151500	125164809	cassetteExon	0.5	100	100	ENSMUST00000205985.2	ENSMUSG00000030748.10	Il4ra	chr7	protein_coding	interleukin 4 receptor, alpha
chr7	125151500	125162498	+	125151500	125164809	A3SS	0.33	50	50	ENSMUST00000205985.2	ENSMUSG00000030748.10	Il4ra	chr7	protein_coding	interleukin 4 receptor, alpha
chr7	125222102;125224539	125224437;125226055	+	125222102	125226055	cassetteExon	0.5	100	100	ENSMUST00000206234.2	ENSMUSG00000030745.10	Il21r	chr7	protein_coding	interleukin 21 receptor
chr7	125228215;125229006	125228910;125229877	+	125228215	125229877	cassetteExon	0.5	100	100	ENSMUST00000206234.2	ENSMUSG00000030745.10	Il21r	chr7	protein_coding	interleukin 21 receptor
chr7	125262718	125266484	-	125262718;125266373	125266196;125266484	ES	0.5	50	50	ENSMUST00000205659.2	ENSMUSG00000032777.10	Gtf3c1	chr7	protein_coding	general transcription factor III C 1
chr7	125280435	125295633	-	125280435;125292434	125292311;125295633	ES	0.5	50	50	ENSMUST00000205659.2	ENSMUSG00000032777.10	Gtf3c1	chr7	protein_coding	general transcription factor III C 1
chr7	125245905;125246799	125246512;125247569	-	125245905	125247569	cassetteExon	0.5	100	100	ENSMUST00000205659.2	ENSMUSG00000032777.10	Gtf3c1	chr7	protein_coding	general transcription factor III C 1
chr7	125253751;125253978	125253877;125255016	-	125253751	125255016	cassetteExon	0.5	100	100	ENSMUST00000205659.2	ENSMUSG00000032777.10	Gtf3c1	chr7	protein_coding	general transcription factor III C 1
chr7	125303212	125305659	-	125303212	125306629	A5SS	0.5	50	50	ENSMUST00000205659.2	ENSMUSG00000032777.10	Gtf3c1	chr7	protein_coding	general transcription factor III C 1
chr7	125245905	125247569	-	125246799	125247569	3pMXE	0.5	50	50	ENSMUST00000206183.2	ENSMUSG00000032777.10	Gtf3c1	chr7	protein_coding	general transcription factor III C 1
chr7	125262718;125266580	125266196;125267166	-	125262718	125267166	cassetteExon	0.5	100	100	ENSMUST00000205444.2	ENSMUSG00000032777.10	Gtf3c1	chr7	protein_coding	general transcription factor III C 1
chr7	125262718;125266580	125266484;125267166	-	125262718	125267166	cassetteExon	0.5	100	100	ENSMUST00000205444.2	ENSMUSG00000032777.10	Gtf3c1	chr7	protein_coding	general transcription factor III C 1
chr7	125280435	125295633	-	125292434	125295633	3pMXE	0.5	50	50	ENSMUST00000205347.2	ENSMUSG00000032777.10	Gtf3c1	chr7	protein_coding	general transcription factor III C 1
chr7	125466839	125469815	+	125466839;125468021	125467911;125469815	ES	0.5	50	50	ENSMUST00000124223.8	ENSMUSG00000032743.16	Katnip	chr7	protein_coding	katanin interacting protein
chr7	125307120;125327536	125327481;125352145	+	125307120	125352145	cassetteExon	0.5	100	100	ENSMUST00000124223.8	ENSMUSG00000032743.16	Katnip	chr7	protein_coding	katanin interacting protein
chr7	125459877	125460787	+	125459877	125464417	A3SS	0.5	50	50	ENSMUST00000124223.8	ENSMUSG00000032743.16	Katnip	chr7	protein_coding	katanin interacting protein
chr7	125307252	125352145	+	125307120	125352145	A5SS	0.33	50	50	ENSMUST00000124223.8	ENSMUSG00000032743.16	Katnip	chr7	protein_coding	katanin interacting protein
chr7	125385538	125394388	+	125369875	125394388	A5SS	0.5	50	50	ENSMUST00000124223.8	ENSMUSG00000032743.16	Katnip	chr7	protein_coding	katanin interacting protein
chr7	125442226	125449471	+	125442625	125449471	A5SS	0.5	50	50	ENSMUST00000124223.8	ENSMUSG00000032743.16	Katnip	chr7	protein_coding	katanin interacting protein
chr7	125307252	125352145	+	125327536	125352145	A5SS&ES	0.33	50	50	ENSMUST00000069660.13	ENSMUSG00000032743.16	Katnip	chr7	protein_coding	katanin interacting protein
chr7	125730306	125748406	-	125730306;125739846	125739737;125748406	ES	0.5	50	50	ENSMUST00000168189.8	ENSMUSG00000000131.16	Xpo6	chr7	protein_coding	exportin 6
chr7	125752451	125760033	-	125752451;125755973	125755896;125760033	ES	0.5	50	50	ENSMUST00000168189.8	ENSMUSG00000000131.16	Xpo6	chr7	protein_coding	exportin 6
chr7	125768498	125773330	-	125768498;125770314	125770202;125773330	ES	0.5	50	50	ENSMUST00000168189.8	ENSMUSG00000000131.16	Xpo6	chr7	protein_coding	exportin 6
chr7	125770314	125799071	-	125770314;125773420	125773330;125799071	ES	0.5	50	50	ENSMUST00000168189.8	ENSMUSG00000000131.16	Xpo6	chr7	protein_coding	exportin 6
chr7	125701562;125702362	125702251;125703876	-	125701562	125703876	cassetteExon	0.5	100	100	ENSMUST00000168189.8	ENSMUSG00000000131.16	Xpo6	chr7	protein_coding	exportin 6
chr7	125748532;125748709	125748676;125751998	-	125748532	125751998	cassetteExon	0.5	100	100	ENSMUST00000168189.8	ENSMUSG00000000131.16	Xpo6	chr7	protein_coding	exportin 6
chr7	125702887	125703876	-	125701562	125703876	A3SS	0.33	50	50	ENSMUST00000168189.8	ENSMUSG00000000131.16	Xpo6	chr7	protein_coding	exportin 6
chr7	125703961	125704273	-	125704106	125704273	A3SS	0.5	50	50	ENSMUST00000168189.8	ENSMUSG00000000131.16	Xpo6	chr7	protein_coding	exportin 6
chr7	125708027	125709086	-	125708072	125709086	A3SS	0.5	50	50	ENSMUST00000168189.8	ENSMUSG00000000131.16	Xpo6	chr7	protein_coding	exportin 6
chr7	125728809	125730198	-	125728812	125730198	A3SS	0.5	50	50	ENSMUST00000168189.8	ENSMUSG00000000131.16	Xpo6	chr7	protein_coding	exportin 6
chr7	125751709	125751998	-	125748532	125751998	A3SS	0.33	50	50	ENSMUST00000168189.8	ENSMUSG00000000131.16	Xpo6	chr7	protein_coding	exportin 6
chr7	125708072	125709126	-	125708072	125709086	A5SS	0.5	50	50	ENSMUST00000168189.8	ENSMUSG00000000131.16	Xpo6	chr7	protein_coding	exportin 6
chr7	125773420	125780703	-	125773420	125799071	A5SS	0.5	50	50	ENSMUST00000168189.8	ENSMUSG00000000131.16	Xpo6	chr7	protein_coding	exportin 6
chr7	125702362	125703876	-	125702362;125702887	125702795;125703876	ES	0.33	50	50	ENSMUST00000166719.8	ENSMUSG00000000131.16	Xpo6	chr7	protein_coding	exportin 6
chr7	125748532	125751998	-	125748532	125748676	A5SS&ES	0.5	50	50	ENSMUST00000170675.8	ENSMUSG00000000131.16	Xpo6	chr7	protein_coding	exportin 6
chr7	125748709	125751998	-	125748709	125750396	A5SS	0.5	50	50	ENSMUST00000170675.8	ENSMUSG00000000131.16	Xpo6	chr7	protein_coding	exportin 6
chr7	125730306	125739737	-	125723703	125739737	A3SS	0.5	50	50	ENSMUST00000166538.2	ENSMUSG00000000131.16	Xpo6	chr7	protein_coding	exportin 6
chr7	125723703	125727399	-	125723703	125739737	A5SS	0.5	50	50	ENSMUST00000166538.2	ENSMUSG00000000131.16	Xpo6	chr7	protein_coding	exportin 6
chr7	125730306	125748406	-	125739846	125748406	3pMXE	0.5	50	50	ENSMUST00000164741.2	ENSMUSG00000000131.16	Xpo6	chr7	protein_coding	exportin 6
chr7	125751709	125751998	-	125748709	125751998	A3SS	0.33	50	50	ENSMUST00000168649.8	ENSMUSG00000000131.16	Xpo6	chr7	protein_coding	exportin 6
chr7	125768498;125770314	125770202;125799071	-	125768498;125773420	125773330;125799071	MXE	0.5	100	100	ENSMUST00000167147.2	ENSMUSG00000000131.16	Xpo6	chr7	protein_coding	exportin 6
chr7	125872271	125889029	+	125848284	125889029	A5SS	0.33	50	50	ENSMUST00000239081.2	ENSMUSG00000042978.12	Sbk1	chr7	protein_coding	SH3-binding kinase 1
chr7	125872689	125889029	+	125848284	125889029	A5SS	0.33	50	50	ENSMUST00000239081.2	ENSMUSG00000042978.12	Sbk1	chr7	protein_coding	SH3-binding kinase 1
chr7	125872689	125889029	+	125872271	125889029	A5SS	0.33	50	50	ENSMUST00000056028.11	ENSMUSG00000042978.12	Sbk1	chr7	protein_coding	SH3-binding kinase 1
chr7	125950112	125950651	-	125947695	125950651	A3SS	0.5	50	50	ENSMUST00000206881.2	ENSMUSG00000108417.2	Gm30928	chr7	lncRNA	predicted gene, 30928
chr7	125967278;125967387	125967358;125967471	-	125967278	125967471	cassetteExon	0.5	100	100	ENSMUST00000206793.2	ENSMUSG00000030742.8	Lat	chr7	protein_coding	linker for activation of T cells
chr7	125967712	125967974	-	125967754	125967974	A3SS	0.5	50	50	ENSMUST00000206793.2	ENSMUSG00000030742.8	Lat	chr7	protein_coding	linker for activation of T cells
chr7	125969585	125970350	-	125969585;125970078	125969907;125970350	ES	0.5	50	50	ENSMUST00000032994.15	ENSMUSG00000030741.16	Spns1	chr7	protein_coding	spinster homolog 1
chr7	125971319	125971917	-	125971319;125971739	125971584;125971917	ES	0.5	50	50	ENSMUST00000032994.15	ENSMUSG00000030741.16	Spns1	chr7	protein_coding	spinster homolog 1
chr7	125973145	125974239	-	125973245	125974239	A3SS	0.25	50	50	ENSMUST00000032994.15	ENSMUSG00000030741.16	Spns1	chr7	protein_coding	spinster homolog 1
chr7	125973451	125974239	-	125973245	125974239	A3SS	0.25	50	50	ENSMUST00000032994.15	ENSMUSG00000030741.16	Spns1	chr7	protein_coding	spinster homolog 1
chr7	125974084	125974239	-	125973245	125974239	A3SS	0.25	50	50	ENSMUST00000032994.15	ENSMUSG00000030741.16	Spns1	chr7	protein_coding	spinster homolog 1
chr7	125975911	125976290	-	125975911	125976009	A5SS	0.5	50	50	ENSMUST00000032994.15	ENSMUSG00000030741.16	Spns1	chr7	protein_coding	spinster homolog 1
chr7	125973145	125974239	-	125973145;125973451	125973373;125974239	ES	0.25	50	50	ENSMUST00000138141.8	ENSMUSG00000030741.16	Spns1	chr7	protein_coding	spinster homolog 1
chr7	125974084	125974239	-	125973451	125974239	A3SS	0.25	50	50	ENSMUST00000138141.8	ENSMUSG00000030741.16	Spns1	chr7	protein_coding	spinster homolog 1
chr7	125969585;125970078	125969907;125972942	-	125969585;125972062	125970350;125972942	MXE	0.5	100	100	ENSMUST00000119754.8	ENSMUSG00000030741.16	Spns1	chr7	protein_coding	spinster homolog 1
chr7	125972062	125972942	-	125970078	125972942	A3SS	0.5	50	50	ENSMUST00000205930.2	ENSMUSG00000030741.16	Spns1	chr7	protein_coding	spinster homolog 1
chr7	125970078	125970350	-	125970078	125972942	A5SS	0.5	50	50	ENSMUST00000205930.2	ENSMUSG00000030741.16	Spns1	chr7	protein_coding	spinster homolog 1
chr7	125971319	125971917	-	125971319	125971584	A5SS	0.5	50	50	ENSMUST00000137263.3	ENSMUSG00000030741.16	Spns1	chr7	protein_coding	spinster homolog 1
chr7	125974084	125974239	-	125973145	125974239	A3SS	0.25	50	50	ENSMUST00000205366.2	ENSMUSG00000030741.16	Spns1	chr7	protein_coding	spinster homolog 1
chr7	125975911	125976290	-	125975911;125976217	125976009;125976290	ES	0.5	50	50	ENSMUST00000150476.3	ENSMUSG00000030741.16	Spns1	chr7	protein_coding	spinster homolog 1
chr7	125984311;125986928	125986574;125989558	-	125984311	125989558	cassetteExon	0.5	100	100	ENSMUST00000142947.2	ENSMUSG00000030722.8	Nfatc2ip	chr7	protein_coding	nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 interacting protein
chr7	126011350	126012563	-	126011353	126012563	A3SS	0.5	50	50	ENSMUST00000205997.2	ENSMUSG00000030724.8	Cd19	chr7	protein_coding	CD19 antigen
chr7	126028957;126033604	126033468;126034832	+	126028957	126034832	cassetteExon	0.5	100	100	ENSMUST00000151304.8	ENSMUSG00000030727.13	Rabep2	chr7	protein_coding	rabaptin, RAB GTPase binding effector protein 2
chr7	126034989;126035517	126035449;126037542	+	126034989	126037542	cassetteExon	0.5	100	100	ENSMUST00000151304.8	ENSMUSG00000030727.13	Rabep2	chr7	protein_coding	rabaptin, RAB GTPase binding effector protein 2
chr7	126028578	126028748	+	126028328	126028748	A5SS	0.5	50	50	ENSMUST00000151304.8	ENSMUSG00000030727.13	Rabep2	chr7	protein_coding	rabaptin, RAB GTPase binding effector protein 2
chr7	126045298	126046043	-	126045298;126045758	126045717;126046043	ES	0.5	50	50	ENSMUST00000032974.13	ENSMUSG00000030730.13	Atp2a1	chr7	protein_coding	ATPase, Ca++ transporting, cardiac muscle, fast twitch 1
chr7	126066945	126067645	-	126066945;126067221	126067122;126067645	ES	0.5	50	50	ENSMUST00000205440.2	ENSMUSG00000030733.11	Sh2b1	chr7	protein_coding	SH2B adaptor protein 1
chr7	126072266	126074168	-	126072266;126072787	126072651;126074168	ES	0.5	50	50	ENSMUST00000205440.2	ENSMUSG00000030733.11	Sh2b1	chr7	protein_coding	SH2B adaptor protein 1
chr7	126068500;126068742	126068660;126070294	-	126068500	126070294	cassetteExon	0.5	100	100	ENSMUST00000205440.2	ENSMUSG00000030733.11	Sh2b1	chr7	protein_coding	SH2B adaptor protein 1
chr7	126066945	126067592	-	126066945	126067122	A5SS&ES	0.33	50	50	ENSMUST00000205440.2	ENSMUSG00000030733.11	Sh2b1	chr7	protein_coding	SH2B adaptor protein 1
chr7	126067221	126067592	-	126067221	126067645	A5SS	0.5	50	50	ENSMUST00000205440.2	ENSMUSG00000030733.11	Sh2b1	chr7	protein_coding	SH2B adaptor protein 1
chr7	126072266	126073791	-	126072266	126072651	A5SS&ES	0.33	50	50	ENSMUST00000205440.2	ENSMUSG00000030733.11	Sh2b1	chr7	protein_coding	SH2B adaptor protein 1
chr7	126066945	126067592	-	126066945;126067221	126067122;126067592	ES	0.5	50	50	ENSMUST00000032978.8	ENSMUSG00000030733.11	Sh2b1	chr7	protein_coding	SH2B adaptor protein 1
chr7	126072266	126074357	-	126072266	126073791	5pMXE	0.25	50	50	ENSMUST00000032978.8	ENSMUSG00000030733.11	Sh2b1	chr7	protein_coding	SH2B adaptor protein 1
chr7	126066945	126067645	-	126066945	126067122	A5SS&ES	0.33	50	50	ENSMUST00000032978.8	ENSMUSG00000030733.11	Sh2b1	chr7	protein_coding	SH2B adaptor protein 1
chr7	126072266	126074168	-	126072266	126073791	A5SS	0.25	50	50	ENSMUST00000032978.8	ENSMUSG00000030733.11	Sh2b1	chr7	protein_coding	SH2B adaptor protein 1
chr7	126068742	126069317	-	126068742	126070294	A5SS	0.5	50	50	ENSMUST00000206664.2	ENSMUSG00000030733.11	Sh2b1	chr7	protein_coding	SH2B adaptor protein 1
chr7	126066945	126067592	-	126066945	126067645	A5SS	0.33	50	50	ENSMUST00000205733.2	ENSMUSG00000030733.11	Sh2b1	chr7	protein_coding	SH2B adaptor protein 1
chr7	126072266	126074357	-	126072266	126074168	5pMXE	0.25	50	50	ENSMUST00000205497.2	ENSMUSG00000030733.11	Sh2b1	chr7	protein_coding	SH2B adaptor protein 1
chr7	126072266	126072651	-	126072266	126074357	A5SS	0.25	50	50	ENSMUST00000206643.2	ENSMUSG00000030733.11	Sh2b1	chr7	protein_coding	SH2B adaptor protein 1
chr7	126086954	126087822	+	126086954;126087598	126087432;126087822	ES	0.5	50	50	ENSMUST00000098048.6	ENSMUSG00000073838.11	Tufm	chr7	protein_coding	Tu translation elongation factor, mitochondrial
chr7	126087926	126088060	+	126087926	126088009	A3SS	0.5	50	50	ENSMUST00000098048.6	ENSMUSG00000073838.11	Tufm	chr7	protein_coding	Tu translation elongation factor, mitochondrial
chr7	126091387;126091657	126091616;126091984	-	126091387	126091984	cassetteExon	0.5	100	100	ENSMUST00000040202.15	ENSMUSG00000032637.16	Atxn2l	chr7	protein_coding	ataxin 2-like
chr7	126091387;126091657	126091621;126091984	-	126091387	126091984	cassetteExon	0.5	100	100	ENSMUST00000040202.15	ENSMUSG00000032637.16	Atxn2l	chr7	protein_coding	ataxin 2-like
chr7	126095800	126096426	-	126095818	126096426	A3SS	0.5	50	50	ENSMUST00000040202.15	ENSMUSG00000032637.16	Atxn2l	chr7	protein_coding	ataxin 2-like
chr7	126100630	126101125	-	126100630	126102072	A5SS	0.25	50	50	ENSMUST00000040202.15	ENSMUSG00000032637.16	Atxn2l	chr7	protein_coding	ataxin 2-like
chr7	126100630	126101402	-	126100630	126102072	A5SS	0.25	50	50	ENSMUST00000040202.15	ENSMUSG00000032637.16	Atxn2l	chr7	protein_coding	ataxin 2-like
chr7	126100630	126101468	-	126100630	126102072	A5SS	0.25	50	50	ENSMUST00000040202.15	ENSMUSG00000032637.16	Atxn2l	chr7	protein_coding	ataxin 2-like
chr7	126100630	126101125	-	126100630	126101468	A5SS	0.25	50	50	ENSMUST00000167759.8	ENSMUSG00000032637.16	Atxn2l	chr7	protein_coding	ataxin 2-like
chr7	126100630	126101402	-	126100630	126101468	A5SS	0.25	50	50	ENSMUST00000167759.8	ENSMUSG00000032637.16	Atxn2l	chr7	protein_coding	ataxin 2-like
chr7	126091387	126091621	-	126091387	126091616	A5SS	0.33	50	50	ENSMUST00000206577.2	ENSMUSG00000032637.16	Atxn2l	chr7	protein_coding	ataxin 2-like
chr7	126091387	126091984	-	126091387	126091616	A5SS&ES	0.33	50	50	ENSMUST00000206577.2	ENSMUSG00000032637.16	Atxn2l	chr7	protein_coding	ataxin 2-like
chr7	126100630	126101125	-	126100630	126101402	A5SS	0.25	50	50	ENSMUST00000166682.9	ENSMUSG00000032637.16	Atxn2l	chr7	protein_coding	ataxin 2-like
chr7	126162924	126163875	-	126162924;126163777	126163588;126163875	ES	0.5	50	50	ENSMUST00000032992.7	ENSMUSG00000030738.12	Eif3c	chr7	protein_coding	eukaryotic translation initiation factor 3, subunit C
chr7	126179584	126180818	-	126179584;126180036	126179965;126180818	ES	0.33	50	50	ENSMUST00000084589.11	ENSMUSG00000030720.17	Cln3	chr7	protein_coding	ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
chr7	126180036;126180628	126180572;126180818	-	126180036	126180818	cassetteExon	0.5	100	100	ENSMUST00000084589.11	ENSMUSG00000030720.17	Cln3	chr7	protein_coding	ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
chr7	126171553	126171643	-	126171558	126171643	A3SS	0.5	50	50	ENSMUST00000084589.11	ENSMUSG00000030720.17	Cln3	chr7	protein_coding	ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
chr7	126182272	126182475	-	126182268	126182475	A3SS	0.5	50	50	ENSMUST00000084589.11	ENSMUSG00000030720.17	Cln3	chr7	protein_coding	ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
chr7	126183452	126183667	-	126183452	126184467	A5SS	0.33	50	50	ENSMUST00000084589.11	ENSMUSG00000030720.17	Cln3	chr7	protein_coding	ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
chr7	126183452	126183778	-	126183452	126184467	A5SS	0.33	50	50	ENSMUST00000084589.11	ENSMUSG00000030720.17	Cln3	chr7	protein_coding	ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
chr7	126180628	126180818	-	126179584	126180818	A3SS	0.33	50	50	ENSMUST00000098036.9	ENSMUSG00000030720.17	Cln3	chr7	protein_coding	ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
chr7	126180036	126180818	-	126180628	126180818	A3SS	0.33	50	50	ENSMUST00000134406.2	ENSMUSG00000030720.17	Cln3	chr7	protein_coding	ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
chr7	126183452	126183778	-	126183452	126183667	5pMXE	0.33	50	50	ENSMUST00000150311.8	ENSMUSG00000030720.17	Cln3	chr7	protein_coding	ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
chr7	126184240	126187069	+	126184240;126186983	126184548;126187069	ES	0.33	50	50	ENSMUST00000039522.8	ENSMUSG00000042759.13	Apobr	chr7	protein_coding	apolipoprotein B receptor
chr7	126186410	126187069	+	126186983	126187069	A5SS	0.33	50	50	ENSMUST00000039522.8	ENSMUSG00000042759.13	Apobr	chr7	protein_coding	apolipoprotein B receptor
chr7	126184240	126184548	+	126184240	126187069	A3SS	0.5	50	50	ENSMUST00000137646.8	ENSMUSG00000042759.13	Apobr	chr7	protein_coding	apolipoprotein B receptor
chr7	126186410	126187069	+	126184240	126187069	A5SS	0.33	50	50	ENSMUST00000137646.8	ENSMUSG00000042759.13	Apobr	chr7	protein_coding	apolipoprotein B receptor
chr7	126186983	126187069	+	126184240	126187069	A5SS	0.33	50	50	ENSMUST00000137646.8	ENSMUSG00000042759.13	Apobr	chr7	protein_coding	apolipoprotein B receptor
chr7	126224307	126224495	-	126224205	126224495	A3SS	0.33	50	50	ENSMUST00000032961.4	ENSMUSG00000030717.10	Nupr1	chr7	protein_coding	nuclear protein transcription regulator 1
chr7	126224357	126224495	-	126224205	126224495	A3SS	0.33	50	50	ENSMUST00000032961.4	ENSMUSG00000030717.10	Nupr1	chr7	protein_coding	nuclear protein transcription regulator 1
chr7	126224357	126224495	-	126224307	126224495	A3SS	0.33	50	50	ENSMUST00000191192.2	ENSMUSG00000030717.10	Nupr1	chr7	protein_coding	nuclear protein transcription regulator 1
chr7	126260320	126263101	+	126260320;126262224	126262200;126263101	ES	0.33	50	50	ENSMUST00000123571.8	ENSMUSG00000030714.15	Sgf29	chr7	protein_coding	SAGA complex associated factor 29
chr7	126260320;126261823	126261738;126263101	+	126260320;126262224	126262200;126263101	MXE	0.5	100	100	ENSMUST00000123571.8	ENSMUSG00000030714.15	Sgf29	chr7	protein_coding	SAGA complex associated factor 29
chr7	126260320;126261823	126261738;126263101	+	126260320	126263101	cassetteExon	0.5	100	100	ENSMUST00000032956.10	ENSMUSG00000030714.15	Sgf29	chr7	protein_coding	SAGA complex associated factor 29
chr7	126260320;126262224	126261738;126263101	+	126260320	126263101	cassetteExon	0.5	100	100	ENSMUST00000032956.10	ENSMUSG00000030714.15	Sgf29	chr7	protein_coding	SAGA complex associated factor 29
chr7	126270839	126270941	+	126270839	126270906	A3SS	0.5	50	50	ENSMUST00000032956.10	ENSMUSG00000030714.15	Sgf29	chr7	protein_coding	SAGA complex associated factor 29
chr7	126270832	126270906	+	126270839	126270906	A5SS	0.5	50	50	ENSMUST00000032956.10	ENSMUSG00000030714.15	Sgf29	chr7	protein_coding	SAGA complex associated factor 29
chr7	126273623	126274221	-	126273569	126274221	A3SS	0.5	50	50	ENSMUST00000106373.9	ENSMUSG00000030711.17	Sult1a1	chr7	protein_coding	sulfotransferase family 1A, phenol-preferring, member 1
chr7	126291831	126294597	-	126291831;126291976	126291925;126294597	ES	0.5	50	50	ENSMUST00000144897.2	ENSMUSG00000059772.13	Slx1b	chr7	protein_coding	SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)
chr7	126295271	126295393	+	126295271	126295355	A3SS	0.5	50	50	ENSMUST00000130498.2	ENSMUSG00000047721.9	Bola2	chr7	protein_coding	bolA-like 2 (E. coli)
chr7	126299157	126299756	-	126299157;126299644	126299429;126299756	ES	0.5	50	50	ENSMUST00000106364.8	ENSMUSG00000030707.16	Coro1a	chr7	protein_coding	coronin, actin binding protein 1A
chr7	126301091	126302148	-	126301091;126301300	126301178;126302148	ES	0.5	50	50	ENSMUST00000106364.8	ENSMUSG00000030707.16	Coro1a	chr7	protein_coding	coronin, actin binding protein 1A
chr7	126302346	126303600	-	126302346	126303141	5pMXE	0.25	50	50	ENSMUST00000106364.8	ENSMUSG00000030707.16	Coro1a	chr7	protein_coding	coronin, actin binding protein 1A
chr7	126302346	126303824	-	126302346	126303141	5pMXE	0.25	50	50	ENSMUST00000106364.8	ENSMUSG00000030707.16	Coro1a	chr7	protein_coding	coronin, actin binding protein 1A
chr7	126302346	126306912	-	126302346	126303141	5pMXE	0.25	50	50	ENSMUST00000106364.8	ENSMUSG00000030707.16	Coro1a	chr7	protein_coding	coronin, actin binding protein 1A
chr7	126299986	126300164	-	126300057	126300164	A3SS	0.5	50	50	ENSMUST00000106364.8	ENSMUSG00000030707.16	Coro1a	chr7	protein_coding	coronin, actin binding protein 1A
chr7	126302346	126306912	-	126302346	126303824	5pMXE	0.25	50	50	ENSMUST00000032949.14	ENSMUSG00000030707.16	Coro1a	chr7	protein_coding	coronin, actin binding protein 1A
chr7	126302367	126303824	-	126302346	126303824	A3SS	0.5	50	50	ENSMUST00000032949.14	ENSMUSG00000030707.16	Coro1a	chr7	protein_coding	coronin, actin binding protein 1A
chr7	126302346	126303600	-	126302346	126303824	A5SS	0.25	50	50	ENSMUST00000032949.14	ENSMUSG00000030707.16	Coro1a	chr7	protein_coding	coronin, actin binding protein 1A
chr7	126299157	126299756	-	126299644	126299756	3pMXE	0.5	50	50	ENSMUST00000133718.8	ENSMUSG00000030707.16	Coro1a	chr7	protein_coding	coronin, actin binding protein 1A
chr7	126301091	126302148	-	126301091	126301178	5pMXE	0.5	50	50	ENSMUST00000123511.8	ENSMUSG00000030707.16	Coro1a	chr7	protein_coding	coronin, actin binding protein 1A
chr7	126302346	126306912	-	126302346	126303600	5pMXE	0.25	50	50	ENSMUST00000135087.8	ENSMUSG00000030707.16	Coro1a	chr7	protein_coding	coronin, actin binding protein 1A
chr7	126362396	126362913	+	126362396;126362686	126362570;126362913	ES	0.5	50	50	ENSMUST00000050201.11	ENSMUSG00000063065.14	Mapk3	chr7	protein_coding	mitogen-activated protein kinase 3
chr7	126363027	126363706	+	126363027;126363537	126363406;126363706	ES	0.5	50	50	ENSMUST00000050201.11	ENSMUSG00000063065.14	Mapk3	chr7	protein_coding	mitogen-activated protein kinase 3
chr7	126359034	126359903	+	126358990	126359903	A5SS	0.5	50	50	ENSMUST00000050201.11	ENSMUSG00000063065.14	Mapk3	chr7	protein_coding	mitogen-activated protein kinase 3
chr7	126362396	126362913	+	126362686	126362913	5pMXE	0.5	50	50	ENSMUST00000135649.2	ENSMUSG00000063065.14	Mapk3	chr7	protein_coding	mitogen-activated protein kinase 3
chr7	126363027	126363706	+	126363027	126363406	3pMXE	0.5	50	50	ENSMUST00000135649.2	ENSMUSG00000063065.14	Mapk3	chr7	protein_coding	mitogen-activated protein kinase 3
chr7	126367024	126367292	+	126367024	126367742	A3SS	0.5	50	50	ENSMUST00000032944.9	ENSMUSG00000030703.9	Gdpd3	chr7	protein_coding	glycerophosphodiester phosphodiesterase domain containing 3
chr7	126373631	126375730	-	126367393	126375730	A3SS	0.5	50	50	ENSMUST00000205660.2	ENSMUSG00000055323.6	Gm9967	chr7	lncRNA	predicted gene 9967
chr7	126377125	126377478	+	126377125;126377269	126377226;126377478	ES	0.5	50	50	ENSMUST00000038614.12	ENSMUSG00000042675.16	Ypel3	chr7	protein_coding	yippee like 3
chr7	126376275;126376789	126376678;126376943	+	126376275	126376943	cassetteExon	0.5	100	100	ENSMUST00000038614.12	ENSMUSG00000042675.16	Ypel3	chr7	protein_coding	yippee like 3
chr7	126376275	126377042	+	126376275	126376943	A3SS	0.33	50	50	ENSMUST00000038614.12	ENSMUSG00000042675.16	Ypel3	chr7	protein_coding	yippee like 3
chr7	126376375	126376943	+	126376275	126376943	A5SS	0.25	50	50	ENSMUST00000038614.12	ENSMUSG00000042675.16	Ypel3	chr7	protein_coding	yippee like 3
chr7	126376413	126376943	+	126376275	126376943	A5SS	0.25	50	50	ENSMUST00000038614.12	ENSMUSG00000042675.16	Ypel3	chr7	protein_coding	yippee like 3
chr7	126376413	126376943	+	126376375	126376943	A5SS	0.25	50	50	ENSMUST00000170882.8	ENSMUSG00000042675.16	Ypel3	chr7	protein_coding	yippee like 3
chr7	126376789	126376943	+	126376375	126376943	A5SS	0.25	50	50	ENSMUST00000170882.8	ENSMUSG00000042675.16	Ypel3	chr7	protein_coding	yippee like 3
chr7	126377125	126377478	+	126377125	126377226	3pMXE	0.5	50	50	ENSMUST00000106359.2	ENSMUSG00000042675.16	Ypel3	chr7	protein_coding	yippee like 3
chr7	126376275	126377042	+	126376275	126376678	A3SS&ES	0.33	50	50	ENSMUST00000106359.2	ENSMUSG00000042675.16	Ypel3	chr7	protein_coding	yippee like 3
chr7	126376413	126376943	+	126376789	126376943	A5SS&ES	0.25	50	50	ENSMUST00000106359.2	ENSMUSG00000042675.16	Ypel3	chr7	protein_coding	yippee like 3
chr7	126383782	126383864	+	126382749	126383864	A5SS	0.5	50	50	ENSMUST00000172352.8	ENSMUSG00000030699.17	Tbx6	chr7	protein_coding	T-box 6
chr7	126386518	126387289	-	126386518;126386782	126386609;126387289	ES	0.5	50	50	ENSMUST00000032936.8	ENSMUSG00000030697.8	Ppp4c	chr7	protein_coding	protein phosphatase 4, catalytic subunit
chr7	126387606	126391233	-	126387606;126388247	126388196;126391233	ES	0.33	50	50	ENSMUST00000032936.8	ENSMUSG00000030697.8	Ppp4c	chr7	protein_coding	protein phosphatase 4, catalytic subunit
chr7	126388306	126391233	-	126388247	126391233	A3SS	0.33	50	50	ENSMUST00000032936.8	ENSMUSG00000030697.8	Ppp4c	chr7	protein_coding	protein phosphatase 4, catalytic subunit
chr7	126386518;126387390	126387289;126387556	-	126386518	126387556	cassetteExon	0.5	100	100	ENSMUST00000205786.2	ENSMUSG00000030697.8	Ppp4c	chr7	protein_coding	protein phosphatase 4, catalytic subunit
chr7	126386518	126386609	-	126386518	126387556	A5SS	0.33	50	50	ENSMUST00000205786.2	ENSMUSG00000030697.8	Ppp4c	chr7	protein_coding	protein phosphatase 4, catalytic subunit
chr7	126387606;126388306	126388196;126391233	-	126387606	126391233	cassetteExon	0.5	100	100	ENSMUST00000205935.2	ENSMUSG00000030697.8	Ppp4c	chr7	protein_coding	protein phosphatase 4, catalytic subunit
chr7	126387606	126391233	-	126387606	126388196	5pMXE	0.5	50	50	ENSMUST00000206353.2	ENSMUSG00000030697.8	Ppp4c	chr7	protein_coding	protein phosphatase 4, catalytic subunit
chr7	126386518	126387289	-	126386782	126387289	3pMXE	0.5	50	50	ENSMUST00000206334.2	ENSMUSG00000030697.8	Ppp4c	chr7	protein_coding	protein phosphatase 4, catalytic subunit
chr7	126386518	126387556	-	126387390	126387556	3pMXE	0.5	50	50	ENSMUST00000205950.2	ENSMUSG00000030697.8	Ppp4c	chr7	protein_coding	protein phosphatase 4, catalytic subunit
chr7	126396948	126399174	-	126396948	126398217	5pMXE	0.16	50	50	ENSMUST00000032934.12	ENSMUSG00000030695.17	Aldoa	chr7	protein_coding	aldolase A, fructose-bisphosphate
chr7	126396948	126399460	-	126396948	126398217	5pMXE	0.16	50	50	ENSMUST00000032934.12	ENSMUSG00000030695.17	Aldoa	chr7	protein_coding	aldolase A, fructose-bisphosphate
chr7	126396948;126397298	126397146;126398217	-	126396948	126398217	cassetteExon	0.5	100	100	ENSMUST00000032934.12	ENSMUSG00000030695.17	Aldoa	chr7	protein_coding	aldolase A, fructose-bisphosphate
chr7	126396948;126398084	126397995;126398217	-	126396948	126398217	cassetteExon	0.5	100	100	ENSMUST00000032934.12	ENSMUSG00000030695.17	Aldoa	chr7	protein_coding	aldolase A, fructose-bisphosphate
chr7	126396948	126397368	-	126396948	126398217	A5SS	0.16	50	50	ENSMUST00000032934.12	ENSMUSG00000030695.17	Aldoa	chr7	protein_coding	aldolase A, fructose-bisphosphate
chr7	126396948	126397146	-	126396948	126399460	A5SS	0.16	50	50	ENSMUST00000106348.8	ENSMUSG00000030695.17	Aldoa	chr7	protein_coding	aldolase A, fructose-bisphosphate
chr7	126396948	126397368	-	126396948	126399460	A5SS	0.16	50	50	ENSMUST00000106348.8	ENSMUSG00000030695.17	Aldoa	chr7	protein_coding	aldolase A, fructose-bisphosphate
chr7	126396948	126397995	-	126396948	126399460	A5SS	0.16	50	50	ENSMUST00000106348.8	ENSMUSG00000030695.17	Aldoa	chr7	protein_coding	aldolase A, fructose-bisphosphate
chr7	126396948	126399174	-	126396948	126399460	A5SS	0.16	50	50	ENSMUST00000106348.8	ENSMUSG00000030695.17	Aldoa	chr7	protein_coding	aldolase A, fructose-bisphosphate
chr7	126397298	126399174	-	126397298	126398217	5pMXE	0.33	50	50	ENSMUST00000087566.11	ENSMUSG00000030695.17	Aldoa	chr7	protein_coding	aldolase A, fructose-bisphosphate
chr7	126396948;126398084	126397995;126398217	-	126396948;126397298	126397146;126398217	MXE	0.5	100	100	ENSMUST00000087566.11	ENSMUSG00000030695.17	Aldoa	chr7	protein_coding	aldolase A, fructose-bisphosphate
chr7	126397298;126398084	126397995;126398217	-	126397298	126398217	cassetteExon	0.5	100	100	ENSMUST00000087566.11	ENSMUSG00000030695.17	Aldoa	chr7	protein_coding	aldolase A, fructose-bisphosphate
chr7	126396948	126397368	-	126396948	126397146	A5SS&ES	0.25	50	50	ENSMUST00000087566.11	ENSMUSG00000030695.17	Aldoa	chr7	protein_coding	aldolase A, fructose-bisphosphate
chr7	126396948	126397995	-	126396948	126397368	5pMXE	0.16	50	50	ENSMUST00000135707.8	ENSMUSG00000030695.17	Aldoa	chr7	protein_coding	aldolase A, fructose-bisphosphate
chr7	126396948	126399174	-	126396948	126397368	5pMXE	0.16	50	50	ENSMUST00000135707.8	ENSMUSG00000030695.17	Aldoa	chr7	protein_coding	aldolase A, fructose-bisphosphate
chr7	126396948;126397298	126397146;126399174	-	126396948	126399174	cassetteExon	0.5	100	100	ENSMUST00000151137.8	ENSMUSG00000030695.17	Aldoa	chr7	protein_coding	aldolase A, fructose-bisphosphate
chr7	126396948	126397995	-	126396948	126399174	A5SS	0.16	50	50	ENSMUST00000151137.8	ENSMUSG00000030695.17	Aldoa	chr7	protein_coding	aldolase A, fructose-bisphosphate
chr7	126396948	126398217	-	126396948	126397995	5pMXE	0.16	50	50	ENSMUST00000205890.2	ENSMUSG00000030695.17	Aldoa	chr7	protein_coding	aldolase A, fructose-bisphosphate
chr7	126396948;126397298	126397146;126397995	-	126396948	126397995	cassetteExon	0.5	100	100	ENSMUST00000205890.2	ENSMUSG00000030695.17	Aldoa	chr7	protein_coding	aldolase A, fructose-bisphosphate
chr7	126396948	126397995	-	126396948	126397146	A5SS&ES	0.2	50	50	ENSMUST00000133514.8	ENSMUSG00000030695.17	Aldoa	chr7	protein_coding	aldolase A, fructose-bisphosphate
chr7	126396948	126398217	-	126396948	126397146	A5SS&ES	0.2	50	50	ENSMUST00000133514.8	ENSMUSG00000030695.17	Aldoa	chr7	protein_coding	aldolase A, fructose-bisphosphate
chr7	126397298	126397995	-	126397298	126399174	A5SS	0.33	50	50	ENSMUST00000133514.8	ENSMUSG00000030695.17	Aldoa	chr7	protein_coding	aldolase A, fructose-bisphosphate
chr7	126416173	126416289	+	126416173	126416361	A3SS	0.33	50	50	ENSMUST00000205324.2	ENSMUSG00000058966.14	Tlcd3b	chr7	protein_coding	TLC domain containing 3B
chr7	126419126	126420750	+	126419126	126424183	A3SS	0.5	50	50	ENSMUST00000205324.2	ENSMUSG00000058966.14	Tlcd3b	chr7	protein_coding	TLC domain containing 3B
chr7	126412118	126416057	+	126396864	126416057	A5SS	0.33	50	50	ENSMUST00000205324.2	ENSMUSG00000058966.14	Tlcd3b	chr7	protein_coding	TLC domain containing 3B
chr7	126413352	126416057	+	126396864	126416057	A5SS	0.33	50	50	ENSMUST00000205324.2	ENSMUSG00000058966.14	Tlcd3b	chr7	protein_coding	TLC domain containing 3B
chr7	126423384	126424183	+	126419126	126424183	A5SS	0.5	50	50	ENSMUST00000205324.2	ENSMUSG00000058966.14	Tlcd3b	chr7	protein_coding	TLC domain containing 3B
chr7	126416173	126418996	+	126416173	126416289	A3SS&ES	0.33	50	50	ENSMUST00000205888.2	ENSMUSG00000058966.14	Tlcd3b	chr7	protein_coding	TLC domain containing 3B
chr7	126413352	126416057	+	126412118	126416057	A5SS	0.33	50	50	ENSMUST00000205888.2	ENSMUSG00000058966.14	Tlcd3b	chr7	protein_coding	TLC domain containing 3B
chr7	126416173	126416361	+	126416173	126418996	A3SS	0.33	50	50	ENSMUST00000205722.2	ENSMUSG00000058966.14	Tlcd3b	chr7	protein_coding	TLC domain containing 3B
chr7	126417565	126418996	+	126416173	126418996	A5SS	0.5	50	50	ENSMUST00000205722.2	ENSMUSG00000058966.14	Tlcd3b	chr7	protein_coding	TLC domain containing 3B
chr7	126407408	126408042	-	126407466	126408042	A3SS	0.5	50	50	ENSMUST00000153686.2	ENSMUSG00000114515.3	Aldoa	chr7	protein_coding	aldolase A, fructose-bisphosphate
chr7	126429790	126430044	-	126429790;126429969	126429882;126430044	ES	0.5	50	50	ENSMUST00000061695.5	ENSMUSG00000045989.5	4930451I11Rik	chr7	protein_coding	RIKEN cDNA 4930451I11 gene
chr7	126430199	126430785	-	126430199	126430583	5pMXE	0.5	50	50	ENSMUST00000061695.5	ENSMUSG00000045989.5	4930451I11Rik	chr7	protein_coding	RIKEN cDNA 4930451I11 gene
chr7	126446934	126447587	+	126446692	126447587	A5SS	0.33	50	50	ENSMUST00000141805.8	ENSMUSG00000052301.15	Doc2a	chr7	protein_coding	double C2, alpha
chr7	126447204	126447587	+	126446692	126447587	A5SS	0.33	50	50	ENSMUST00000141805.8	ENSMUSG00000052301.15	Doc2a	chr7	protein_coding	double C2, alpha
chr7	126447204	126447610	+	126447204	126447587	A3SS	0.33	50	50	ENSMUST00000064110.14	ENSMUSG00000052301.15	Doc2a	chr7	protein_coding	double C2, alpha
chr7	126447204	126447679	+	126447204	126447587	A3SS	0.33	50	50	ENSMUST00000064110.14	ENSMUSG00000052301.15	Doc2a	chr7	protein_coding	double C2, alpha
chr7	126446934	126447587	+	126447204	126447587	A5SS	0.33	50	50	ENSMUST00000064110.14	ENSMUSG00000052301.15	Doc2a	chr7	protein_coding	double C2, alpha
chr7	126450547	126450709	+	126450618	126450709	A5SS	0.5	50	50	ENSMUST00000064110.14	ENSMUSG00000052301.15	Doc2a	chr7	protein_coding	double C2, alpha
chr7	126446934	126447679	+	126446934	126447587	A3SS	0.33	50	50	ENSMUST00000152406.2	ENSMUSG00000052301.15	Doc2a	chr7	protein_coding	double C2, alpha
chr7	126446934	126447745	+	126446934	126447587	A3SS	0.33	50	50	ENSMUST00000152406.2	ENSMUSG00000052301.15	Doc2a	chr7	protein_coding	double C2, alpha
chr7	126446934	126447745	+	126446934	126447679	A3SS	0.33	50	50	ENSMUST00000205938.2	ENSMUSG00000052301.15	Doc2a	chr7	protein_coding	double C2, alpha
chr7	126447204	126447679	+	126446934	126447679	A5SS	0.5	50	50	ENSMUST00000205938.2	ENSMUSG00000052301.15	Doc2a	chr7	protein_coding	double C2, alpha
chr7	126447204	126447610	+	126447204	126447679	A3SS	0.33	50	50	ENSMUST00000147257.2	ENSMUSG00000052301.15	Doc2a	chr7	protein_coding	double C2, alpha
chr7	126457124	126460648	-	126457124	126460412	5pMXE	0.5	50	50	ENSMUST00000205619.2	ENSMUSG00000030689.16	Ino80e	chr7	protein_coding	INO80 complex subunit E
chr7	126452163	126456398	-	126450362	126456398	A3SS	0.33	50	50	ENSMUST00000205619.2	ENSMUSG00000030689.16	Ino80e	chr7	protein_coding	INO80 complex subunit E
chr7	126452163	126456848	-	126456514	126456848	A3SS&ES	0.33	50	50	ENSMUST00000205619.2	ENSMUSG00000030689.16	Ino80e	chr7	protein_coding	INO80 complex subunit E
chr7	126452752	126456398	-	126450362	126456398	A3SS	0.33	50	50	ENSMUST00000205619.2	ENSMUSG00000030689.16	Ino80e	chr7	protein_coding	INO80 complex subunit E
chr7	126456463	126456848	-	126456514	126456848	A3SS	0.33	50	50	ENSMUST00000205619.2	ENSMUSG00000030689.16	Ino80e	chr7	protein_coding	INO80 complex subunit E
chr7	126456894	126457046	-	126456959	126457046	A3SS	0.5	50	50	ENSMUST00000205619.2	ENSMUSG00000030689.16	Ino80e	chr7	protein_coding	INO80 complex subunit E
chr7	126452163	126456848	-	126452163;126456514	126456398;126456848	ES	0.33	50	50	ENSMUST00000050833.14	ENSMUSG00000030689.16	Ino80e	chr7	protein_coding	INO80 complex subunit E
chr7	126452163;126452752	126452661;126456398	-	126452163	126456398	cassetteExon	0.5	100	100	ENSMUST00000050833.14	ENSMUSG00000030689.16	Ino80e	chr7	protein_coding	INO80 complex subunit E
chr7	126457124	126460648	-	126457124;126460464	126460412;126460648	ES	0.5	50	50	ENSMUST00000106342.8	ENSMUSG00000030689.16	Ino80e	chr7	protein_coding	INO80 complex subunit E
chr7	126460718	126460877	-	126460718	126460798	5pMXE	0.5	50	50	ENSMUST00000106342.8	ENSMUSG00000030689.16	Ino80e	chr7	protein_coding	INO80 complex subunit E
chr7	126460464	126460877	-	126460464;126460718	126460648;126460877	ES	0.33	50	50	ENSMUST00000106343.3	ENSMUSG00000030689.16	Ino80e	chr7	protein_coding	INO80 complex subunit E
chr7	126460739	126460877	-	126460718	126460877	A3SS	0.33	50	50	ENSMUST00000106343.3	ENSMUSG00000030689.16	Ino80e	chr7	protein_coding	INO80 complex subunit E
chr7	126452163	126456848	-	126452163	126456398	A5SS	0.33	50	50	ENSMUST00000125624.8	ENSMUSG00000030689.16	Ino80e	chr7	protein_coding	INO80 complex subunit E
chr7	126452163;126456463	126456398;126456848	-	126452163	126456848	cassetteExon	0.5	100	100	ENSMUST00000206349.2	ENSMUSG00000030689.16	Ino80e	chr7	protein_coding	INO80 complex subunit E
chr7	126452163	126452661	-	126452163	126456848	A5SS	0.33	50	50	ENSMUST00000206349.2	ENSMUSG00000030689.16	Ino80e	chr7	protein_coding	INO80 complex subunit E
chr7	126457124;126460718	126460648;126460877	-	126457124;126460464	126460412;126460877	MXE	0.5	100	100	ENSMUST00000205958.2	ENSMUSG00000030689.16	Ino80e	chr7	protein_coding	INO80 complex subunit E
chr7	126457124;126460739	126460648;126460877	-	126457124;126460464	126460412;126460877	MXE	0.5	100	100	ENSMUST00000205958.2	ENSMUSG00000030689.16	Ino80e	chr7	protein_coding	INO80 complex subunit E
chr7	126460464;126460739	126460648;126460877	-	126460464	126460877	cassetteExon	0.5	100	100	ENSMUST00000205958.2	ENSMUSG00000030689.16	Ino80e	chr7	protein_coding	INO80 complex subunit E
chr7	126457124	126460648	-	126460464	126460648	A3SS	0.5	50	50	ENSMUST00000154881.8	ENSMUSG00000030689.16	Ino80e	chr7	protein_coding	INO80 complex subunit E
chr7	126460464	126460877	-	126460464	126460648	5pMXE	0.5	50	50	ENSMUST00000129812.2	ENSMUSG00000030689.16	Ino80e	chr7	protein_coding	INO80 complex subunit E
chr7	126467494	126470574	-	126467494;126468079	126468011;126470574	ES	0.5	50	50	ENSMUST00000214525.2	ENSMUSG00000059981.13	Taok2	chr7	protein_coding	TAO kinase 2
chr7	126485487;126488232	126488063;126490775	-	126485487	126490775	cassetteExon	0.5	100	100	ENSMUST00000154174.2	ENSMUSG00000060538.15	Tmem219	chr7	protein_coding	transmembrane protein 219
chr7	126496110	126497396	-	126496110	126496198	5pMXE	0.33	50	50	ENSMUST00000120007.8	ENSMUSG00000060538.15	Tmem219	chr7	protein_coding	transmembrane protein 219
chr7	126496110	126521982	-	126496110	126496198	5pMXE	0.33	50	50	ENSMUST00000120007.8	ENSMUSG00000060538.15	Tmem219	chr7	protein_coding	transmembrane protein 219
chr7	126485487	126490775	-	126485487	126488063	5pMXE	0.5	50	50	ENSMUST00000137875.8	ENSMUSG00000060538.15	Tmem219	chr7	protein_coding	transmembrane protein 219
chr7	126496110	126497396	-	126496110;126496396	126496198;126497396	ES	0.33	50	50	ENSMUST00000121532.8	ENSMUSG00000060538.15	Tmem219	chr7	protein_coding	transmembrane protein 219
chr7	126496396	126497969	-	126496396	126497396	5pMXE	0.5	50	50	ENSMUST00000121532.8	ENSMUSG00000060538.15	Tmem219	chr7	protein_coding	transmembrane protein 219
chr7	126496399	126497396	-	126496396	126497396	A3SS	0.33	50	50	ENSMUST00000121532.8	ENSMUSG00000060538.15	Tmem219	chr7	protein_coding	transmembrane protein 219
chr7	126496110	126497396	-	126496110;126496399	126496198;126497396	ES	0.33	50	50	ENSMUST00000032926.12	ENSMUSG00000060538.15	Tmem219	chr7	protein_coding	transmembrane protein 219
chr7	126496399	126497969	-	126496399	126497396	5pMXE	0.5	50	50	ENSMUST00000032926.12	ENSMUSG00000060538.15	Tmem219	chr7	protein_coding	transmembrane protein 219
chr7	126496399	126497969	-	126496396	126497969	A3SS	0.5	50	50	ENSMUST00000119781.8	ENSMUSG00000060538.15	Tmem219	chr7	protein_coding	transmembrane protein 219
chr7	126485487	126490775	-	126488232	126490775	3pMXE	0.5	50	50	ENSMUST00000121612.4	ENSMUSG00000060538.15	Tmem219	chr7	protein_coding	transmembrane protein 219
chr7	126498095	126521982	-	126496110	126521982	A3SS	0.5	50	50	ENSMUST00000121612.4	ENSMUSG00000060538.15	Tmem219	chr7	protein_coding	transmembrane protein 219
chr7	126496110	126497396	-	126496110	126521982	A5SS	0.33	50	50	ENSMUST00000121612.4	ENSMUSG00000060538.15	Tmem219	chr7	protein_coding	transmembrane protein 219
chr7	126541514	126546177	+	126541514	126544057	3pMXE	0.5	50	50	ENSMUST00000032924.6	ENSMUSG00000030685.6	Kctd13	chr7	protein_coding	potassium channel tetramerisation domain containing 13
chr7	126550288	126551946	+	126550288;126551303	126551172;126551946	ES	0.5	50	50	ENSMUST00000123117.2	ENSMUSG00000095334.3	Gm21984	chr7	lncRNA	predicted gene 21984
chr7	126551303	126552126	+	126551303	126551946	3pMXE	0.5	50	50	ENSMUST00000123117.2	ENSMUSG00000095334.3	Gm21984	chr7	lncRNA	predicted gene 21984
chr7	126547619	126548730	-	126547811	126548730	A3SS	0.5	50	50	ENSMUST00000052937.12	ENSMUSG00000046378.12	Asphd1	chr7	protein_coding	aspartate beta-hydroxylase domain containing 1
chr7	126566377;126566917	126566879;126567099	+	126566377	126567099	cassetteExon	0.5	100	100	ENSMUST00000106335.8	ENSMUSG00000030683.12	Sez6l2	chr7	protein_coding	seizure related 6 homolog like 2
chr7	126567450	126569225	+	126567428	126569225	A5SS	0.5	50	50	ENSMUST00000106335.8	ENSMUSG00000030683.12	Sez6l2	chr7	protein_coding	seizure related 6 homolog like 2
chr7	126550288	126551946	+	126550288	126551172	A3SS&ES	0.5	50	50	ENSMUST00000106332.3	ENSMUSG00000030683.12	Sez6l2	chr7	protein_coding	seizure related 6 homolog like 2
chr7	126573682	126574112	-	126573682;126573884	126573851;126574112	ES	0.5	50	50	ENSMUST00000205437.3	ENSMUSG00000097075.4	Cdiptos	chr7	protein_coding	CDIP transferase, opposite strand
chr7	126574563	126575241	-	126574563	126574686	5pMXE	0.25	50	50	ENSMUST00000205437.3	ENSMUSG00000097075.4	Cdiptos	chr7	protein_coding	CDIP transferase, opposite strand
chr7	126573725	126573851	-	126573682	126573851	A3SS	0.5	50	50	ENSMUST00000205437.3	ENSMUSG00000097075.4	Cdiptos	chr7	protein_coding	CDIP transferase, opposite strand
chr7	126573682	126573781	-	126573682	126573851	A5SS	0.33	50	50	ENSMUST00000205437.3	ENSMUSG00000097075.4	Cdiptos	chr7	protein_coding	CDIP transferase, opposite strand
chr7	126574563	126574998	-	126574563	126574686	A5SS	0.25	50	50	ENSMUST00000205437.3	ENSMUSG00000097075.4	Cdiptos	chr7	protein_coding	CDIP transferase, opposite strand
chr7	126574563	126575082	-	126574563	126574686	A5SS	0.25	50	50	ENSMUST00000205437.3	ENSMUSG00000097075.4	Cdiptos	chr7	protein_coding	CDIP transferase, opposite strand
chr7	126573682	126574112	-	126573682;126573884	126573781;126574112	ES	0.5	50	50	ENSMUST00000205903.2	ENSMUSG00000097075.4	Cdiptos	chr7	protein_coding	CDIP transferase, opposite strand
chr7	126574563	126574998	-	126574563	126575241	A5SS	0.25	50	50	ENSMUST00000181859.3	ENSMUSG00000097075.4	Cdiptos	chr7	protein_coding	CDIP transferase, opposite strand
chr7	126574563	126575082	-	126574563	126575241	A5SS	0.25	50	50	ENSMUST00000181859.3	ENSMUSG00000097075.4	Cdiptos	chr7	protein_coding	CDIP transferase, opposite strand
chr7	126574563	126575082	-	126574563	126574998	5pMXE	0.25	50	50	ENSMUST00000206816.2	ENSMUSG00000097075.4	Cdiptos	chr7	protein_coding	CDIP transferase, opposite strand
chr7	126578168	126578707	+	126578168;126578575	126578494;126578707	ES	0.5	50	50	ENSMUST00000032920.5	ENSMUSG00000030682.5	Cdipt	chr7	protein_coding	CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
chr7	126575978	126576175	+	126575978	126576090	A3SS	0.5	50	50	ENSMUST00000032920.5	ENSMUSG00000030682.5	Cdipt	chr7	protein_coding	CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
chr7	126577587	126578038	+	126577587	126578087	A3SS	0.5	50	50	ENSMUST00000032920.5	ENSMUSG00000030682.5	Cdipt	chr7	protein_coding	CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
chr7	126578168	126578430	+	126578168	126578494	A3SS	0.25	50	50	ENSMUST00000032920.5	ENSMUSG00000030682.5	Cdipt	chr7	protein_coding	CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
chr7	126578168	126578477	+	126578168	126578494	A3SS	0.25	50	50	ENSMUST00000032920.5	ENSMUSG00000030682.5	Cdipt	chr7	protein_coding	CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
chr7	126578168	126578707	+	126578168	126578494	3pMXE	0.25	50	50	ENSMUST00000206780.2	ENSMUSG00000030682.5	Cdipt	chr7	protein_coding	CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
chr7	126578168	126578707	+	126578168;126578575	126578430;126578707	ES	0.5	50	50	ENSMUST00000206170.2	ENSMUSG00000030682.5	Cdipt	chr7	protein_coding	CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
chr7	126578168	126578477	+	126578168	126578430	A3SS	0.25	50	50	ENSMUST00000206170.2	ENSMUSG00000030682.5	Cdipt	chr7	protein_coding	CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
chr7	126578168	126578707	+	126578168;126578575	126578477;126578707	ES	0.5	50	50	ENSMUST00000206346.2	ENSMUSG00000030682.5	Cdipt	chr7	protein_coding	CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
chr7	126601130	126614420	-	126601130	126613691	5pMXE	0.33	50	50	ENSMUST00000165096.9	ENSMUSG00000030681.19	Mvp	chr7	protein_coding	major vault protein
chr7	126601130	126610973	-	126601130	126613691	A5SS	0.33	50	50	ENSMUST00000165096.9	ENSMUSG00000030681.19	Mvp	chr7	protein_coding	major vault protein
chr7	126601130	126614420	-	126601130	126610973	5pMXE	0.33	50	50	ENSMUST00000133172.2	ENSMUSG00000030681.19	Mvp	chr7	protein_coding	major vault protein
chr7	126615454	126615730	-	126615454	126615615	5pMXE	0.25	50	50	ENSMUST00000172958.7	ENSMUSG00000092534.9	Pagr1b	chr7	protein_coding	PAXIP1 associated glutamate rich protein 1B
chr7	126615454	126616449	-	126615454	126615615	5pMXE	0.25	50	50	ENSMUST00000172958.7	ENSMUSG00000092534.9	Pagr1b	chr7	protein_coding	PAXIP1 associated glutamate rich protein 1B
chr7	126615454	126620177	-	126615454	126615615	5pMXE	0.25	50	50	ENSMUST00000172958.7	ENSMUSG00000092534.9	Pagr1b	chr7	protein_coding	PAXIP1 associated glutamate rich protein 1B
chr7	126615454	126620177	-	126615454	126616449	5pMXE	0.25	50	50	ENSMUST00000162069.3	ENSMUSG00000030680.7	Pagr1a	chr7	protein_coding	PAXIP1 associated glutamate rich protein 1A
chr7	126615454;126616099	126615615;126616449	-	126615454	126616449	cassetteExon	0.5	100	100	ENSMUST00000162069.3	ENSMUSG00000030680.7	Pagr1a	chr7	protein_coding	PAXIP1 associated glutamate rich protein 1A
chr7	126615454;126616099	126615730;126616449	-	126615454	126616449	cassetteExon	0.5	100	100	ENSMUST00000162069.3	ENSMUSG00000030680.7	Pagr1a	chr7	protein_coding	PAXIP1 associated glutamate rich protein 1A
chr7	126616099	126620177	-	126616099	126616449	5pMXE	0.5	50	50	ENSMUST00000206416.2	ENSMUSG00000030680.7	Pagr1a	chr7	protein_coding	PAXIP1 associated glutamate rich protein 1A
chr7	126615454;126616099	126615615;126620177	-	126615454	126620177	cassetteExon	0.5	100	100	ENSMUST00000201606.2	ENSMUSG00000107068.2	Gm42742	chr7	protein_coding	predicted gene 42742
chr7	126615454;126616099	126615730;126620177	-	126615454	126620177	cassetteExon	0.5	100	100	ENSMUST00000201606.2	ENSMUSG00000107068.2	Gm42742	chr7	protein_coding	predicted gene 42742
chr7	126618702	126620177	-	126615454	126620177	A3SS	0.25	50	50	ENSMUST00000201606.2	ENSMUSG00000107068.2	Gm42742	chr7	protein_coding	predicted gene 42742
chr7	126619527	126620177	-	126615454	126620177	A3SS	0.25	50	50	ENSMUST00000201606.2	ENSMUSG00000107068.2	Gm42742	chr7	protein_coding	predicted gene 42742
chr7	126618702	126620177	-	126616099	126620177	A3SS	0.25	50	50	ENSMUST00000202624.2	ENSMUSG00000107068.2	Gm42742	chr7	protein_coding	predicted gene 42742
chr7	126619527	126620177	-	126616099	126620177	A3SS	0.25	50	50	ENSMUST00000202624.2	ENSMUSG00000107068.2	Gm42742	chr7	protein_coding	predicted gene 42742
chr7	126617902	126618056	-	126616059	126618056	A3SS	0.5	50	50	ENSMUST00000161728.2	ENSMUSG00000107068.2	Gm42742	chr7	protein_coding	predicted gene 42742
chr7	126618702	126620177	-	126619527	126620177	A3SS&ES	0.33	50	50	ENSMUST00000161728.2	ENSMUSG00000107068.2	Gm42742	chr7	protein_coding	predicted gene 42742
chr7	126618177	126620020	-	126618177	126619443	A5SS&ES	0.5	50	50	ENSMUST00000161728.2	ENSMUSG00000107068.2	Gm42742	chr7	protein_coding	predicted gene 42742
chr7	126619527	126620020	-	126619527	126620177	A5SS	0.5	50	50	ENSMUST00000161728.2	ENSMUSG00000107068.2	Gm42742	chr7	protein_coding	predicted gene 42742
chr7	126618177	126620020	-	126619527	126620020	A3SS	0.5	50	50	ENSMUST00000160767.2	ENSMUSG00000045114.11	Prrt2	chr7	protein_coding	proline-rich transmembrane protein 2
chr7	126618177;126619527	126619443;126620020	-	126618177	126620020	cassetteExon	0.5	100	100	ENSMUST00000201963.2	ENSMUSG00000045114.11	Prrt2	chr7	protein_coding	proline-rich transmembrane protein 2
chr7	126622340	126623616	-	126622340;126622878	126622654;126623616	ES	0.5	50	50	ENSMUST00000205568.2	ENSMUSG00000030678.8	Maz	chr7	protein_coding	MYC-associated zinc finger protein (purine-binding transcription factor)
chr7	126625423	126626123	-	126625486	126626123	A3SS	0.5	50	50	ENSMUST00000206254.2	ENSMUSG00000030678.8	Maz	chr7	protein_coding	MYC-associated zinc finger protein (purine-binding transcription factor)
chr7	126625326	126625400	-	126623787	126625400	A3SS	0.5	50	50	ENSMUST00000205461.2	ENSMUSG00000030678.8	Maz	chr7	protein_coding	MYC-associated zinc finger protein (purine-binding transcription factor)
chr7	126623787	126624048	-	126623787	126625400	A5SS	0.5	50	50	ENSMUST00000205461.2	ENSMUSG00000030678.8	Maz	chr7	protein_coding	MYC-associated zinc finger protein (purine-binding transcription factor)
chr7	126635112;126635275	126635203;126641516	-	126635112	126641516	cassetteExon	0.5	100	100	ENSMUST00000032915.8	ENSMUSG00000030677.9	Kif22	chr7	protein_coding	kinesin family member 22
chr7	126651152	126651904	-	126651152	126651805	5pMXE	0.5	50	50	ENSMUST00000205424.2	ENSMUSG00000049350.7	Zg16	chr7	protein_coding	zymogen granule protein 16
chr7	126672267	126686252	-	126652058	126686252	A3SS	0.5	50	50	ENSMUST00000205559.2	ENSMUSG00000049350.7	Zg16	chr7	protein_coding	zymogen granule protein 16
chr7	126690644	126691383	+	126690644	126691341	A3SS	0.5	50	50	ENSMUST00000056288.7	ENSMUSG00000045165.7	AI467606	chr7	protein_coding	expressed sequence AI467606
chr7	126708416;126717489	126717325;126721145	-	126708416	126721145	cassetteExon	0.5	100	100	ENSMUST00000032912.6	ENSMUSG00000030674.6	Qprt	chr7	protein_coding	quinolinate phosphoribosyltransferase
chr7	126715391	126721145	-	126708416	126721145	A3SS	0.33	50	50	ENSMUST00000032912.6	ENSMUSG00000030674.6	Qprt	chr7	protein_coding	quinolinate phosphoribosyltransferase
chr7	126715391	126721145	-	126717489	126721145	A3SS&ES	0.33	50	50	ENSMUST00000129332.2	ENSMUSG00000030674.6	Qprt	chr7	protein_coding	quinolinate phosphoribosyltransferase
chr7	126794011	126794195	-	126794073	126794195	A3SS	0.5	50	50	ENSMUST00000166791.8	ENSMUSG00000042502.11	Cd2bp2	chr7	protein_coding	CD2 cytoplasmic tail binding protein 2
chr7	126794639	126795101	-	126794633	126795101	A3SS	0.5	50	50	ENSMUST00000166791.8	ENSMUSG00000042502.11	Cd2bp2	chr7	protein_coding	CD2 cytoplasmic tail binding protein 2
chr7	126794633	126794959	-	126794633	126795101	A5SS	0.33	50	50	ENSMUST00000166791.8	ENSMUSG00000042502.11	Cd2bp2	chr7	protein_coding	CD2 cytoplasmic tail binding protein 2
chr7	126794633	126795087	-	126794633	126795101	A5SS	0.33	50	50	ENSMUST00000166791.8	ENSMUSG00000042502.11	Cd2bp2	chr7	protein_coding	CD2 cytoplasmic tail binding protein 2
chr7	126794633	126795087	-	126794639	126795087	A3SS	0.5	50	50	ENSMUST00000206026.2	ENSMUSG00000042502.11	Cd2bp2	chr7	protein_coding	CD2 cytoplasmic tail binding protein 2
chr7	126794639	126794959	-	126794639	126795087	A5SS	0.33	50	50	ENSMUST00000206026.2	ENSMUSG00000042502.11	Cd2bp2	chr7	protein_coding	CD2 cytoplasmic tail binding protein 2
chr7	126794639	126795101	-	126794639	126795087	A5SS	0.33	50	50	ENSMUST00000206026.2	ENSMUSG00000042502.11	Cd2bp2	chr7	protein_coding	CD2 cytoplasmic tail binding protein 2
chr7	126794639	126794959	-	126794639	126795101	A5SS	0.33	50	50	ENSMUST00000205316.2	ENSMUSG00000042502.11	Cd2bp2	chr7	protein_coding	CD2 cytoplasmic tail binding protein 2
chr7	126794633	126794959	-	126794639	126794959	A3SS	0.5	50	50	ENSMUST00000035771.5	ENSMUSG00000042502.11	Cd2bp2	chr7	protein_coding	CD2 cytoplasmic tail binding protein 2
chr7	126794633	126794959	-	126794633	126795087	A5SS	0.33	50	50	ENSMUST00000205321.2	ENSMUSG00000042502.11	Cd2bp2	chr7	protein_coding	CD2 cytoplasmic tail binding protein 2
chr7	126798624	126799267	-	126798624;126799094	126798905;126799267	ES	0.5	50	50	ENSMUST00000120705.3	ENSMUSG00000042492.13	Tbc1d10b	chr7	protein_coding	TBC1 domain family, member 10b
chr7	126798624	126799267	-	126798624	126798905	5pMXE	0.33	50	50	ENSMUST00000153857.2	ENSMUSG00000042492.13	Tbc1d10b	chr7	protein_coding	TBC1 domain family, member 10b
chr7	126798624	126802344	-	126798624	126798905	5pMXE	0.33	50	50	ENSMUST00000153857.2	ENSMUSG00000042492.13	Tbc1d10b	chr7	protein_coding	TBC1 domain family, member 10b
chr7	126798624;126799571	126799267;126802344	-	126798624	126802344	cassetteExon	0.5	100	100	ENSMUST00000124240.8	ENSMUSG00000042492.13	Tbc1d10b	chr7	protein_coding	TBC1 domain family, member 10b
chr7	126798624	126799267	-	126799094	126799267	3pMXE	0.5	50	50	ENSMUST00000137987.8	ENSMUSG00000042492.13	Tbc1d10b	chr7	protein_coding	TBC1 domain family, member 10b
chr7	126798624	126802344	-	126799571	126802344	3pMXE	0.5	50	50	ENSMUST00000138219.2	ENSMUSG00000042492.13	Tbc1d10b	chr7	protein_coding	TBC1 domain family, member 10b
chr7	126811879	126812033	+	126810935	126812033	A5SS	0.33	50	50	ENSMUST00000206204.2	ENSMUSG00000030672.13	Mylpf	chr7	protein_coding	myosin light chain, phosphorylatable, fast skeletal muscle
chr7	126808123	126808456	+	126808123	126812033	A3SS	0.5	50	50	ENSMUST00000206772.2	ENSMUSG00000030672.13	Mylpf	chr7	protein_coding	myosin light chain, phosphorylatable, fast skeletal muscle
chr7	126810935	126812033	+	126808123	126812033	A5SS	0.33	50	50	ENSMUST00000206772.2	ENSMUSG00000030672.13	Mylpf	chr7	protein_coding	myosin light chain, phosphorylatable, fast skeletal muscle
chr7	126811879	126812033	+	126808123	126812033	A5SS	0.33	50	50	ENSMUST00000206772.2	ENSMUSG00000030672.13	Mylpf	chr7	protein_coding	myosin light chain, phosphorylatable, fast skeletal muscle
chr7	126814927	126815862	-	126814927;126815141	126815040;126815862	ES	0.5	50	50	ENSMUST00000106314.8	ENSMUSG00000000486.14	Septin1	chr7	protein_coding	septin 1
chr7	126816207	126817143	-	126816207;126816914	126816791;126817143	ES	0.5	50	50	ENSMUST00000106314.8	ENSMUSG00000000486.14	Septin1	chr7	protein_coding	septin 1
chr7	126817403	126831737	-	126817403	126817579	5pMXE	0.33	50	50	ENSMUST00000106314.8	ENSMUSG00000000486.14	Septin1	chr7	protein_coding	septin 1
chr7	126817403	126817497	-	126817403	126817579	A5SS	0.33	50	50	ENSMUST00000106314.8	ENSMUSG00000000486.14	Septin1	chr7	protein_coding	septin 1
chr7	126814927	126815862	-	126815141	126815862	3pMXE	0.5	50	50	ENSMUST00000142356.3	ENSMUSG00000000486.14	Septin1	chr7	protein_coding	septin 1
chr7	126817403	126831737	-	126817403	126817497	5pMXE	0.33	50	50	ENSMUST00000142356.3	ENSMUSG00000000486.14	Septin1	chr7	protein_coding	septin 1
chr7	126816207	126817143	-	126816207	126816791	A5SS	0.5	50	50	ENSMUST00000133733.3	ENSMUSG00000000486.14	Septin1	chr7	protein_coding	septin 1
chr7	126832689	126834436	+	126832658	126834436	A5SS	0.5	50	50	ENSMUST00000106312.4	ENSMUSG00000045598.11	Zfp553	chr7	protein_coding	zinc finger protein 553
chr7	126844306;126844870	126844745;126852977	+	126844306	126852977	cassetteExon	0.5	100	100	ENSMUST00000052509.6	ENSMUSG00000054716.5	Zfp771	chr7	protein_coding	zinc finger protein 771
chr7	126844306	126852977	+	126844306	126844745	3pMXE	0.5	50	50	ENSMUST00000151893.2	ENSMUSG00000054716.5	Zfp771	chr7	protein_coding	zinc finger protein 771
chr7	126844306	126852977	+	126844870	126852977	5pMXE	0.5	50	50	ENSMUST00000205583.2	ENSMUSG00000054716.5	Zfp771	chr7	protein_coding	zinc finger protein 771
chr7	126887500	126888282	+	126887162	126888282	A5SS	0.5	50	50	ENSMUST00000205924.2	ENSMUSG00000108760.2	Gm31897	chr7	lncRNA	predicted gene, 31897
chr7	126908792	126909357	+	126906118	126909357	A5SS	0.5	50	50	ENSMUST00000117762.8	ENSMUSG00000030830.19	Itgal	chr7	protein_coding	integrin alpha L
chr7	126916538	126921067	+	126916535	126921067	A5SS	0.5	50	50	ENSMUST00000117762.8	ENSMUSG00000030830.19	Itgal	chr7	protein_coding	integrin alpha L
chr7	126944038	126944321	-	126944047	126944321	A3SS	0.5	50	50	ENSMUST00000060783.7	ENSMUSG00000047371.8	Zfp768	chr7	protein_coding	zinc finger protein 768
chr7	126974674	126974889	-	126974674	126974815	A5SS	0.5	50	50	ENSMUST00000067425.6	ENSMUSG00000054381.6	Zfp747	chr7	protein_coding	zinc finger protein 747
chr7	126985805	126986020	-	126985805	126985946	A5SS	0.5	50	50	ENSMUST00000049052.4	ENSMUSG00000030823.7	9130019O22Rik	chr7	protein_coding	RIKEN cDNA 9130019O22 gene
chr7	126992283	126992425	-	126992286	126992425	A3SS	0.5	50	50	ENSMUST00000165495.2	ENSMUSG00000078580.4	E430018J23Rik	chr7	protein_coding	RIKEN cDNA E430018J23 gene
chr7	126992286	126992462	-	126992286	126992425	A5SS	0.5	50	50	ENSMUST00000165495.2	ENSMUSG00000078580.4	E430018J23Rik	chr7	protein_coding	RIKEN cDNA E430018J23 gene
chr7	127005451	127005630	-	127005451	127005593	A5SS	0.5	50	50	ENSMUST00000059199.7	ENSMUSG00000045757.7	Zfp764	chr7	protein_coding	zinc finger protein 764
chr7	127018813;127019277	127019182;127020577	-	127018813	127020577	cassetteExon	0.5	100	100	ENSMUST00000136123.8	ENSMUSG00000045251.14	Zfp688	chr7	protein_coding	zinc finger protein 688
chr7	127018813	127020981	-	127018813	127020577	A5SS	0.33	50	50	ENSMUST00000136123.8	ENSMUSG00000045251.14	Zfp688	chr7	protein_coding	zinc finger protein 688
chr7	127018813	127020981	-	127018813;127020690	127020577;127020981	ES	0.5	50	50	ENSMUST00000106300.2	ENSMUSG00000045251.14	Zfp688	chr7	protein_coding	zinc finger protein 688
chr7	127020690	127020795	-	127020690	127020981	A5SS	0.5	50	50	ENSMUST00000106300.2	ENSMUSG00000045251.14	Zfp688	chr7	protein_coding	zinc finger protein 688
chr7	127019277	127020795	-	127019277;127020690	127020577;127020795	ES	0.5	50	50	ENSMUST00000148483.8	ENSMUSG00000045251.14	Zfp688	chr7	protein_coding	zinc finger protein 688
chr7	127018813	127020981	-	127018813	127019182	A5SS&ES	0.33	50	50	ENSMUST00000148483.8	ENSMUSG00000045251.14	Zfp688	chr7	protein_coding	zinc finger protein 688
chr7	127018813	127020577	-	127018813	127019182	A5SS	0.33	50	50	ENSMUST00000135886.2	ENSMUSG00000045251.14	Zfp688	chr7	protein_coding	zinc finger protein 688
chr7	127018813;127020690	127020577;127020795	-	127018813;127019277	127019182;127020795	MXE	0.5	100	100	ENSMUST00000129038.2	ENSMUSG00000045251.14	Zfp688	chr7	protein_coding	zinc finger protein 688
chr7	127048743	127058687	+	127048743	127056152	3pMXE	0.5	50	50	ENSMUST00000147487.2	ENSMUSG00000086502.2	B130055M24Rik	chr7	lncRNA	RIKEN cDNA B130055M24 gene
chr7	127069595	127070157	+	127069595	127069724	A3SS	0.5	50	50	ENSMUST00000128805.2	ENSMUSG00000030822.16	Prr14	chr7	protein_coding	proline rich 14
chr7	127070291	127071270	+	127070291;127071149	127071078;127071270	ES	0.5	50	50	ENSMUST00000106292.8	ENSMUSG00000030822.16	Prr14	chr7	protein_coding	proline rich 14
chr7	127073158	127073686	+	127073158;127073594	127073551;127073686	ES	0.5	50	50	ENSMUST00000106292.8	ENSMUSG00000030822.16	Prr14	chr7	protein_coding	proline rich 14
chr7	127070291	127070877	+	127070291	127071078	A3SS	0.33	50	50	ENSMUST00000106292.8	ENSMUSG00000030822.16	Prr14	chr7	protein_coding	proline rich 14
chr7	127075465	127075616	+	127075465	127075556	A3SS	0.5	50	50	ENSMUST00000106292.8	ENSMUSG00000030822.16	Prr14	chr7	protein_coding	proline rich 14
chr7	127070291;127071149	127070877;127071270	+	127070291	127071270	cassetteExon	0.5	100	100	ENSMUST00000133817.8	ENSMUSG00000030822.16	Prr14	chr7	protein_coding	proline rich 14
chr7	127070291	127071270	+	127071149	127071270	5pMXE	0.5	50	50	ENSMUST00000033095.10	ENSMUSG00000030822.16	Prr14	chr7	protein_coding	proline rich 14
chr7	127088422	127088626	+	127088422	127088560	A3SS	0.5	50	50	ENSMUST00000205432.3	ENSMUSG00000042423.10	Fbrs	chr7	protein_coding	fibrosin
chr7	127086070	127086437	+	127086061	127086437	A5SS	0.33	50	50	ENSMUST00000205432.3	ENSMUSG00000042423.10	Fbrs	chr7	protein_coding	fibrosin
chr7	127079287;127080190	127080039;127081955	+	127079287	127081955	cassetteExon	0.5	100	100	ENSMUST00000206394.2	ENSMUSG00000042423.10	Fbrs	chr7	protein_coding	fibrosin
chr7	127082393	127083714	+	127082393	127086437	A3SS	0.5	50	50	ENSMUST00000206394.2	ENSMUSG00000042423.10	Fbrs	chr7	protein_coding	fibrosin
chr7	127086061	127086437	+	127082393	127086437	A5SS	0.33	50	50	ENSMUST00000206394.2	ENSMUSG00000042423.10	Fbrs	chr7	protein_coding	fibrosin
chr7	127086070	127086437	+	127082393	127086437	A5SS	0.33	50	50	ENSMUST00000206394.2	ENSMUSG00000042423.10	Fbrs	chr7	protein_coding	fibrosin
chr7	127113412;127114482	127114376;127115114	+	127113412	127115114	cassetteExon	0.5	100	100	ENSMUST00000185401.7	ENSMUSG00000053877.13	Srcap	chr7	protein_coding	Snf2-related CREBBP activator protein
chr7	127111802	127113337	+	127111510	127113337	A5SS	0.25	50	50	ENSMUST00000185401.7	ENSMUSG00000053877.13	Srcap	chr7	protein_coding	Snf2-related CREBBP activator protein
chr7	127112218	127113337	+	127111510	127113337	A5SS	0.25	50	50	ENSMUST00000185401.7	ENSMUSG00000053877.13	Srcap	chr7	protein_coding	Snf2-related CREBBP activator protein
chr7	127112295	127113337	+	127111510	127113337	A5SS	0.25	50	50	ENSMUST00000185401.7	ENSMUSG00000053877.13	Srcap	chr7	protein_coding	Snf2-related CREBBP activator protein
chr7	127127661	127128307	+	127127661	127128310	A3SS	0.5	50	50	ENSMUST00000188124.7	ENSMUSG00000053877.13	Srcap	chr7	protein_coding	Snf2-related CREBBP activator protein
chr7	127113412	127115114	+	127113412	127114376	3pMXE	0.5	50	50	ENSMUST00000187442.7	ENSMUSG00000053877.13	Srcap	chr7	protein_coding	Snf2-related CREBBP activator protein
chr7	127137940	127138929	+	127137940	127138121	3pMXE	0.5	50	50	ENSMUST00000186672.7	ENSMUSG00000053877.13	Srcap	chr7	protein_coding	Snf2-related CREBBP activator protein
chr7	127112218	127113337	+	127111802	127113337	A5SS	0.25	50	50	ENSMUST00000186672.7	ENSMUSG00000053877.13	Srcap	chr7	protein_coding	Snf2-related CREBBP activator protein
chr7	127112295	127113337	+	127111802	127113337	A5SS	0.25	50	50	ENSMUST00000186672.7	ENSMUSG00000053877.13	Srcap	chr7	protein_coding	Snf2-related CREBBP activator protein
chr7	127112295	127113337	+	127112218	127113337	A5SS	0.25	50	50	ENSMUST00000187164.7	ENSMUSG00000053877.13	Srcap	chr7	protein_coding	Snf2-related CREBBP activator protein
chr7	127137940	127138929	+	127137940;127138408	127138121;127138929	ES	0.5	50	50	ENSMUST00000187040.7	ENSMUSG00000053877.13	Srcap	chr7	protein_coding	Snf2-related CREBBP activator protein
chr7	127139093	127139828	+	127139093;127139605	127139423;127139828	ES	0.5	50	50	ENSMUST00000187040.7	ENSMUSG00000053877.13	Srcap	chr7	protein_coding	Snf2-related CREBBP activator protein
chr7	127162464	127165904	+	127162464	127163956	A3SS	0.5	50	50	ENSMUST00000189629.5	ENSMUSG00000107023.3	Gm42715	chr7	protein_coding	predicted gene 42715
chr7	127172628	127173026	+	127172628	127172917	A3SS	0.5	50	50	ENSMUST00000129457.2	ENSMUSG00000030815.12	Phkg2	chr7	protein_coding	phosphorylase kinase, gamma 2 (testis)
chr7	127176818	127178839	+	127176860	127178839	A5SS	0.33	50	50	ENSMUST00000146383.8	ENSMUSG00000030815.12	Phkg2	chr7	protein_coding	phosphorylase kinase, gamma 2 (testis)
chr7	127177201	127178839	+	127176860	127178839	A5SS	0.33	50	50	ENSMUST00000146383.8	ENSMUSG00000030815.12	Phkg2	chr7	protein_coding	phosphorylase kinase, gamma 2 (testis)
chr7	127176818;127177201	127177147;127178839	+	127176818	127178839	cassetteExon	0.5	100	100	ENSMUST00000205633.2	ENSMUSG00000030815.12	Phkg2	chr7	protein_coding	phosphorylase kinase, gamma 2 (testis)
chr7	127176818	127177147	+	127176882	127177147	A5SS	0.5	50	50	ENSMUST00000033086.8	ENSMUSG00000030815.12	Phkg2	chr7	protein_coding	phosphorylase kinase, gamma 2 (testis)
chr7	127176818	127178839	+	127177201	127178839	A5SS&ES	0.33	50	50	ENSMUST00000033086.8	ENSMUSG00000030815.12	Phkg2	chr7	protein_coding	phosphorylase kinase, gamma 2 (testis)
chr7	127179145;127181619	127181295;127181691	+	127179145	127181691	cassetteExon	0.5	100	100	ENSMUST00000206818.2	ENSMUSG00000030815.12	Phkg2	chr7	protein_coding	phosphorylase kinase, gamma 2 (testis)
chr7	127184225	127184626	-	127184225;127184433	127184317;127184626	ES	0.5	50	50	ENSMUST00000072155.5	ENSMUSG00000057176.5	Ccdc189	chr7	protein_coding	coiled-coil domain containing 189
chr7	127184225	127184626	-	127184225	127184317	A5SS	0.5	50	50	ENSMUST00000206891.2	ENSMUSG00000057176.5	Ccdc189	chr7	protein_coding	coiled-coil domain containing 189
chr7	127191009	127191969	+	127191009;127191880	127191761;127191969	ES	0.5	50	50	ENSMUST00000205694.2	ENSMUSG00000030816.9	Rnf40	chr7	protein_coding	ring finger protein 40
chr7	127191009	127193779	+	127191009;127192148	127191969;127193779	ES	0.5	50	50	ENSMUST00000033088.8	ENSMUSG00000030816.9	Rnf40	chr7	protein_coding	ring finger protein 40
chr7	127191009;127192148	127191761;127193779	+	127191009	127193779	cassetteExon	0.5	100	100	ENSMUST00000206914.2	ENSMUSG00000030816.9	Rnf40	chr7	protein_coding	ring finger protein 40
chr7	127191009	127191969	+	127191880	127191969	5pMXE	0.5	50	50	ENSMUST00000206699.2	ENSMUSG00000030816.9	Rnf40	chr7	protein_coding	ring finger protein 40
chr7	127191009	127193779	+	127192148	127193779	5pMXE	0.5	50	50	ENSMUST00000206724.2	ENSMUSG00000030816.9	Rnf40	chr7	protein_coding	ring finger protein 40
chr7	127211945	127213944	-	127211945	127213125	5pMXE	0.12	50	50	ENSMUST00000058038.12	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127211945	127214116	-	127211945	127213125	5pMXE	0.12	50	50	ENSMUST00000058038.12	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127211945	127214255	-	127211945	127213125	5pMXE	0.12	50	50	ENSMUST00000058038.12	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127211945	127214941	-	127211945	127213125	5pMXE	0.12	50	50	ENSMUST00000058038.12	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127208006	127211839	-	127211734	127211839	A3SS	0.33	50	50	ENSMUST00000058038.12	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127211753	127211839	-	127211734	127211839	A3SS	0.33	50	50	ENSMUST00000058038.12	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127211945	127212176	-	127211945	127213125	A5SS	0.12	50	50	ENSMUST00000058038.12	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127211945	127213073	-	127211945	127213125	A5SS	0.12	50	50	ENSMUST00000058038.12	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127211945	127213449	-	127211945	127213125	A5SS	0.12	50	50	ENSMUST00000058038.12	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127211945	127214255	-	127211945;127212253	127212176;127214255	ES	0.5	50	50	ENSMUST00000122066.8	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127211945	127213073	-	127211945	127212176	A5SS&ES	0.14	50	50	ENSMUST00000122066.8	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127211945	127213449	-	127211945	127212176	A5SS&ES	0.14	50	50	ENSMUST00000122066.8	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127211945	127213944	-	127211945	127212176	A5SS&ES	0.14	50	50	ENSMUST00000122066.8	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127211945	127214116	-	127211945	127212176	A5SS&ES	0.14	50	50	ENSMUST00000122066.8	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127211945	127214941	-	127211945	127214255	5pMXE	0.12	50	50	ENSMUST00000084564.10	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127211945	127213073	-	127211945	127214255	A5SS	0.12	50	50	ENSMUST00000084564.10	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127211945	127213449	-	127211945	127214255	A5SS	0.12	50	50	ENSMUST00000084564.10	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127211945	127213944	-	127211945	127214255	A5SS	0.12	50	50	ENSMUST00000084564.10	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127211945	127214116	-	127211945	127214255	A5SS	0.12	50	50	ENSMUST00000084564.10	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127211945	127214116	-	127211945	127213944	5pMXE	0.12	50	50	ENSMUST00000151107.8	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127211945	127214941	-	127211945	127213944	5pMXE	0.12	50	50	ENSMUST00000151107.8	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127211753	127211839	-	127208006	127211839	A3SS	0.33	50	50	ENSMUST00000151107.8	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127211945	127213073	-	127211945	127213944	A5SS	0.12	50	50	ENSMUST00000151107.8	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127211945	127213449	-	127211945	127213944	A5SS	0.12	50	50	ENSMUST00000151107.8	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127211945	127214941	-	127211945	127214116	5pMXE	0.12	50	50	ENSMUST00000134446.8	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127211945	127213073	-	127211945	127214116	A5SS	0.12	50	50	ENSMUST00000134446.8	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127211945	127213449	-	127211945	127214116	A5SS	0.12	50	50	ENSMUST00000134446.8	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127211945	127212176	-	127211945	127214941	A5SS	0.12	50	50	ENSMUST00000132524.8	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127211945	127213073	-	127211945	127214941	A5SS	0.12	50	50	ENSMUST00000132524.8	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127211945	127213449	-	127211945	127214941	A5SS	0.12	50	50	ENSMUST00000132524.8	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127211945;127213124	127213073;127213449	-	127211945	127213449	cassetteExon	0.5	100	100	ENSMUST00000131318.8	ENSMUSG00000045639.15	Zfp629	chr7	protein_coding	zinc finger protein 629
chr7	127304984	127307052	-	127304984;127306476	127306348;127307052	ES	0.33	50	50	ENSMUST00000106282.8	ENSMUSG00000030814.18	Bcl7c	chr7	protein_coding	B cell CLL/lymphoma 7C
chr7	127304984;127306132	127305751;127306348	-	127304984	127306348	cassetteExon	0.5	100	100	ENSMUST00000106282.8	ENSMUSG00000030814.18	Bcl7c	chr7	protein_coding	B cell CLL/lymphoma 7C
chr7	127304347	127304899	-	127266218	127304899	A3SS	0.5	50	50	ENSMUST00000106282.8	ENSMUSG00000030814.18	Bcl7c	chr7	protein_coding	B cell CLL/lymphoma 7C
chr7	127306713	127307052	-	127306476	127307052	A3SS	0.33	50	50	ENSMUST00000106282.8	ENSMUSG00000030814.18	Bcl7c	chr7	protein_coding	B cell CLL/lymphoma 7C
chr7	127306713	127307608	-	127307130	127307608	A3SS&ES	0.5	50	50	ENSMUST00000106282.8	ENSMUSG00000030814.18	Bcl7c	chr7	protein_coding	B cell CLL/lymphoma 7C
chr7	127306713	127307608	-	127306713;127307130	127307052;127307608	ES	0.5	50	50	ENSMUST00000205977.2	ENSMUSG00000030814.18	Bcl7c	chr7	protein_coding	B cell CLL/lymphoma 7C
chr7	127304984;127307130	127307052;127307608	-	127304984;127306713	127306348;127307608	MXE	0.5	100	100	ENSMUST00000206200.2	ENSMUSG00000030814.18	Bcl7c	chr7	protein_coding	B cell CLL/lymphoma 7C
chr7	127304984;127306713	127306348;127307052	-	127304984	127307052	cassetteExon	0.5	100	100	ENSMUST00000207019.2	ENSMUSG00000030814.18	Bcl7c	chr7	protein_coding	B cell CLL/lymphoma 7C
chr7	127304984	127305751	-	127304984	127307052	A5SS	0.33	50	50	ENSMUST00000207019.2	ENSMUSG00000030814.18	Bcl7c	chr7	protein_coding	B cell CLL/lymphoma 7C
chr7	127306713	127307608	-	127306713	127307052	5pMXE	0.5	50	50	ENSMUST00000144103.3	ENSMUSG00000030814.18	Bcl7c	chr7	protein_coding	B cell CLL/lymphoma 7C
chr7	127312193	127313097	+	127311951	127313097	A5SS	0.25	50	50	ENSMUST00000047393.7	ENSMUSG00000042340.7	Ctf1	chr7	protein_coding	cardiotrophin 1
chr7	127312779	127313097	+	127311951	127313097	A5SS	0.25	50	50	ENSMUST00000047393.7	ENSMUSG00000042340.7	Ctf1	chr7	protein_coding	cardiotrophin 1
chr7	127312858	127313097	+	127311951	127313097	A5SS	0.25	50	50	ENSMUST00000047393.7	ENSMUSG00000042340.7	Ctf1	chr7	protein_coding	cardiotrophin 1
chr7	127312193	127313097	+	127312193	127313100	A3SS	0.5	50	50	ENSMUST00000206997.2	ENSMUSG00000042340.7	Ctf1	chr7	protein_coding	cardiotrophin 1
chr7	127312779	127313097	+	127312193	127313097	A5SS	0.25	50	50	ENSMUST00000206506.2	ENSMUSG00000042340.7	Ctf1	chr7	protein_coding	cardiotrophin 1
chr7	127312858	127313097	+	127312193	127313097	A5SS	0.25	50	50	ENSMUST00000206506.2	ENSMUSG00000042340.7	Ctf1	chr7	protein_coding	cardiotrophin 1
chr7	127312858	127313097	+	127312779	127313097	A5SS	0.25	50	50	ENSMUST00000206073.2	ENSMUSG00000042340.7	Ctf1	chr7	protein_coding	cardiotrophin 1
chr7	127322447	127331218	-	127322447	127324739	5pMXE	0.5	50	50	ENSMUST00000076091.4	ENSMUSG00000060034.6	Ctf2	chr7	protein_coding	cardiotrophin 2
chr7	127344504	127347422	+	127343956	127347422	A5SS	0.25	50	50	ENSMUST00000205689.2	ENSMUSG00000030811.15	Fbxl19	chr7	protein_coding	F-box and leucine-rich repeat protein 19
chr7	127345039	127347422	+	127343956	127347422	A5SS	0.25	50	50	ENSMUST00000205689.2	ENSMUSG00000030811.15	Fbxl19	chr7	protein_coding	F-box and leucine-rich repeat protein 19
chr7	127346309	127347422	+	127343956	127347422	A5SS	0.25	50	50	ENSMUST00000205689.2	ENSMUSG00000030811.15	Fbxl19	chr7	protein_coding	F-box and leucine-rich repeat protein 19
chr7	127349239	127350037	+	127349239;127349538	127349320;127350037	ES	0.5	50	50	ENSMUST00000186207.7	ENSMUSG00000030811.15	Fbxl19	chr7	protein_coding	F-box and leucine-rich repeat protein 19
chr7	127345039	127347422	+	127344504	127347422	A5SS	0.25	50	50	ENSMUST00000186207.7	ENSMUSG00000030811.15	Fbxl19	chr7	protein_coding	F-box and leucine-rich repeat protein 19
chr7	127346309	127347422	+	127344504	127347422	A5SS	0.25	50	50	ENSMUST00000186207.7	ENSMUSG00000030811.15	Fbxl19	chr7	protein_coding	F-box and leucine-rich repeat protein 19
chr7	127350069	127351182	+	127350198	127351182	A5SS	0.33	50	50	ENSMUST00000186207.7	ENSMUSG00000030811.15	Fbxl19	chr7	protein_coding	F-box and leucine-rich repeat protein 19
chr7	127350200	127351182	+	127350198	127351182	A5SS	0.33	50	50	ENSMUST00000186207.7	ENSMUSG00000030811.15	Fbxl19	chr7	protein_coding	F-box and leucine-rich repeat protein 19
chr7	127345039	127347460	+	127345039	127347422	A3SS	0.5	50	50	ENSMUST00000189562.7	ENSMUSG00000030811.15	Fbxl19	chr7	protein_coding	F-box and leucine-rich repeat protein 19
chr7	127346309	127347422	+	127345039	127347422	A5SS	0.25	50	50	ENSMUST00000189562.7	ENSMUSG00000030811.15	Fbxl19	chr7	protein_coding	F-box and leucine-rich repeat protein 19
chr7	127350069	127351182	+	127350200	127351182	A5SS	0.33	50	50	ENSMUST00000186116.7	ENSMUSG00000030811.15	Fbxl19	chr7	protein_coding	F-box and leucine-rich repeat protein 19
chr7	127369388;127370050	127369906;127372729	+	127369388	127372729	cassetteExon	0.5	100	100	ENSMUST00000118865.8	ENSMUSG00000043964.15	Orai3	chr7	protein_coding	ORAI calcium release-activated calcium modulator 3
chr7	127379827	127380983	+	127379827	127382801	A3SS	0.5	50	50	ENSMUST00000047075.14	ENSMUSG00000042308.15	Setd1a	chr7	protein_coding	SET domain containing 1A
chr7	127376480	127377285	+	127376519	127377285	A5SS	0.25	50	50	ENSMUST00000047075.14	ENSMUSG00000042308.15	Setd1a	chr7	protein_coding	SET domain containing 1A
chr7	127376685	127377285	+	127376519	127377285	A5SS	0.25	50	50	ENSMUST00000047075.14	ENSMUSG00000042308.15	Setd1a	chr7	protein_coding	SET domain containing 1A
chr7	127376956	127377285	+	127376519	127377285	A5SS	0.25	50	50	ENSMUST00000047075.14	ENSMUSG00000042308.15	Setd1a	chr7	protein_coding	SET domain containing 1A
chr7	127376685	127377285	+	127376480	127377285	A5SS	0.25	50	50	ENSMUST00000144406.8	ENSMUSG00000042308.15	Setd1a	chr7	protein_coding	SET domain containing 1A
chr7	127376956	127377285	+	127376480	127377285	A5SS	0.25	50	50	ENSMUST00000144406.8	ENSMUSG00000042308.15	Setd1a	chr7	protein_coding	SET domain containing 1A
chr7	127376956	127377285	+	127376685	127377285	A5SS	0.25	50	50	ENSMUST00000126761.8	ENSMUSG00000042308.15	Setd1a	chr7	protein_coding	SET domain containing 1A
chr7	127400418	127401006	+	127400418;127400788	127400633;127401006	ES	0.5	50	50	ENSMUST00000154987.8	ENSMUSG00000108815.2	Gm49388	chr7	protein_coding	predicted gene, 49388
chr7	127401285	127401958	+	127401285;127401570	127401408;127401958	ES	0.5	50	50	ENSMUST00000154987.8	ENSMUSG00000108815.2	Gm49388	chr7	protein_coding	predicted gene, 49388
chr7	127398652	127400247	+	127398652	127400299	A3SS	0.5	50	50	ENSMUST00000154987.8	ENSMUSG00000108815.2	Gm49388	chr7	protein_coding	predicted gene, 49388
chr7	127400418	127400564	+	127400418	127400633	A3SS	0.25	50	50	ENSMUST00000154987.8	ENSMUSG00000108815.2	Gm49388	chr7	protein_coding	predicted gene, 49388
chr7	127401285	127401501	+	127401285	127401408	A3SS	0.33	50	50	ENSMUST00000154987.8	ENSMUSG00000108815.2	Gm49388	chr7	protein_coding	predicted gene, 49388
chr7	127399886	127400299	+	127398652	127400299	A5SS	0.33	50	50	ENSMUST00000154987.8	ENSMUSG00000108815.2	Gm49388	chr7	protein_coding	predicted gene, 49388
chr7	127400222	127400299	+	127398652	127400299	A5SS	0.33	50	50	ENSMUST00000154987.8	ENSMUSG00000108815.2	Gm49388	chr7	protein_coding	predicted gene, 49388
chr7	127400535	127400633	+	127400418	127400633	A5SS	0.5	50	50	ENSMUST00000154987.8	ENSMUSG00000108815.2	Gm49388	chr7	protein_coding	predicted gene, 49388
chr7	127399886	127400247	+	127398652	127400247	A5SS	0.5	50	50	ENSMUST00000136823.8	ENSMUSG00000108815.2	Gm49388	chr7	protein_coding	predicted gene, 49388
chr7	127399886	127400224	+	127399886	127400247	A3SS	0.33	50	50	ENSMUST00000046863.12	ENSMUSG00000042289.12	Hsd3b7	chr7	protein_coding	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
chr7	127399886	127400299	+	127399886	127400247	A3SS	0.33	50	50	ENSMUST00000046863.12	ENSMUSG00000042289.12	Hsd3b7	chr7	protein_coding	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
chr7	127400418	127401186	+	127400418	127400633	A3SS&ES	0.25	50	50	ENSMUST00000132702.8	ENSMUSG00000042289.12	Hsd3b7	chr7	protein_coding	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
chr7	127401285	127401958	+	127401285	127401408	A3SS	0.33	50	50	ENSMUST00000144748.8	ENSMUSG00000042289.12	Hsd3b7	chr7	protein_coding	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
chr7	127400418;127401114	127400633;127401186	+	127400418	127401186	cassetteExon	0.5	100	100	ENSMUST00000206674.2	ENSMUSG00000042289.12	Hsd3b7	chr7	protein_coding	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
chr7	127400418;127401114	127401006;127401186	+	127400418	127401186	cassetteExon	0.5	100	100	ENSMUST00000206674.2	ENSMUSG00000042289.12	Hsd3b7	chr7	protein_coding	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
chr7	127400418	127400564	+	127400418	127401186	A3SS	0.25	50	50	ENSMUST00000206674.2	ENSMUSG00000042289.12	Hsd3b7	chr7	protein_coding	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
chr7	127401285	127401501	+	127401373	127401501	A5SS	0.5	50	50	ENSMUST00000206674.2	ENSMUSG00000042289.12	Hsd3b7	chr7	protein_coding	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
chr7	127401285	127401958	+	127401285;127401570	127401501;127401958	ES	0.5	50	50	ENSMUST00000106272.8	ENSMUSG00000042289.12	Hsd3b7	chr7	protein_coding	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
chr7	127399886	127400224	+	127399886	127400299	A3SS	0.33	50	50	ENSMUST00000125188.8	ENSMUSG00000042289.12	Hsd3b7	chr7	protein_coding	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
chr7	127400222	127400299	+	127399886	127400299	A5SS	0.33	50	50	ENSMUST00000125188.8	ENSMUSG00000042289.12	Hsd3b7	chr7	protein_coding	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
chr7	127400418	127401006	+	127400418;127400788	127400564;127401006	ES	0.5	50	50	ENSMUST00000155005.3	ENSMUSG00000042289.12	Hsd3b7	chr7	protein_coding	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
chr7	127400418	127401006	+	127400788	127401006	A5SS	0.5	50	50	ENSMUST00000206995.2	ENSMUSG00000042289.12	Hsd3b7	chr7	protein_coding	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
chr7	127400418	127401006	+	127400418	127400633	3pMXE	0.25	50	50	ENSMUST00000138432.2	ENSMUSG00000042289.12	Hsd3b7	chr7	protein_coding	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
chr7	127445300;127445448	127445372;127445660	+	127445300	127445660	cassetteExon	0.5	100	100	ENSMUST00000152310.8	ENSMUSG00000030805.15	Stx4a	chr7	protein_coding	syntaxin 4A (placental)
chr7	127447670;127447839	127447741;127447923	+	127447670	127447923	cassetteExon	0.5	100	100	ENSMUST00000152310.8	ENSMUSG00000030805.15	Stx4a	chr7	protein_coding	syntaxin 4A (placental)
chr7	127441716	127441856	+	127423589	127441856	A5SS	0.5	50	50	ENSMUST00000152310.8	ENSMUSG00000030805.15	Stx4a	chr7	protein_coding	syntaxin 4A (placental)
chr7	127441537	127441595	+	127441537	127441617	A3SS	0.5	50	50	ENSMUST00000033075.14	ENSMUSG00000030805.15	Stx4a	chr7	protein_coding	syntaxin 4A (placental)
chr7	127447670	127447923	+	127447670	127447741	A3SS	0.5	50	50	ENSMUST00000121705.8	ENSMUSG00000030805.15	Stx4a	chr7	protein_coding	syntaxin 4A (placental)
chr7	127445300	127445660	+	127445448	127445660	A5SS	0.5	50	50	ENSMUST00000138294.2	ENSMUSG00000030805.15	Stx4a	chr7	protein_coding	syntaxin 4A (placental)
chr7	127447670	127447923	+	127447839	127447923	A5SS	0.5	50	50	ENSMUST00000125861.2	ENSMUSG00000030805.15	Stx4a	chr7	protein_coding	syntaxin 4A (placental)
chr7	127467596;127473930	127473849;127475219	-	127467596	127475219	cassetteExon	0.5	100	100	ENSMUST00000054415.12	ENSMUSG00000049728.15	Zfp668	chr7	protein_coding	zinc finger protein 668
chr7	127467596	127474449	-	127467596	127475219	A5SS	0.25	50	50	ENSMUST00000054415.12	ENSMUSG00000049728.15	Zfp668	chr7	protein_coding	zinc finger protein 668
chr7	127467596	127474821	-	127467596	127475219	A5SS	0.25	50	50	ENSMUST00000054415.12	ENSMUSG00000049728.15	Zfp668	chr7	protein_coding	zinc finger protein 668
chr7	127473099	127473849	-	127467596	127473849	A3SS	0.5	50	50	ENSMUST00000106263.8	ENSMUSG00000049728.15	Zfp668	chr7	protein_coding	zinc finger protein 668
chr7	127467596	127474449	-	127467596	127473849	A5SS&ES	0.25	50	50	ENSMUST00000106263.8	ENSMUSG00000049728.15	Zfp668	chr7	protein_coding	zinc finger protein 668
chr7	127467596	127474821	-	127467596	127473849	A5SS&ES	0.25	50	50	ENSMUST00000106263.8	ENSMUSG00000049728.15	Zfp668	chr7	protein_coding	zinc finger protein 668
chr7	127467596	127474821	-	127467596	127474449	5pMXE	0.25	50	50	ENSMUST00000106261.8	ENSMUSG00000049728.15	Zfp668	chr7	protein_coding	zinc finger protein 668
chr7	127485453	127486122	-	127485453;127485916	127485700;127486122	ES	0.5	50	50	ENSMUST00000121394.3	ENSMUSG00000044139.13	Prss53	chr7	protein_coding	protease, serine 53
chr7	127488929	127492419	-	127488929	127490031	5pMXE	0.5	50	50	ENSMUST00000121394.3	ENSMUSG00000044139.13	Prss53	chr7	protein_coding	protease, serine 53
chr7	127493786	127494355	-	127493786	127494581	A5SS	0.33	50	50	ENSMUST00000126662.2	ENSMUSG00000030804.9	Gm21974	chr7	protein_coding	predicted gene 21974
chr7	127493786	127494459	-	127493786	127494581	A5SS	0.33	50	50	ENSMUST00000126662.2	ENSMUSG00000030804.9	Gm21974	chr7	protein_coding	predicted gene 21974
chr7	127493786	127494459	-	127493786	127494355	5pMXE	0.33	50	50	ENSMUST00000206053.2	ENSMUSG00000096145.3	Vkorc1	chr7	protein_coding	vitamin K epoxide reductase complex, subunit 1
chr7	127506519	127507093	+	127506519;127506703	127506614;127507093	ES	0.5	50	50	ENSMUST00000071056.14	ENSMUSG00000030802.15	Bckdk	chr7	protein_coding	branched chain ketoacid dehydrogenase kinase
chr7	127504652	127504948	+	127504652	127504921	A3SS	0.5	50	50	ENSMUST00000071056.14	ENSMUSG00000030802.15	Bckdk	chr7	protein_coding	branched chain ketoacid dehydrogenase kinase
chr7	127507251	127507406	+	127507251	127507339	A3SS	0.5	50	50	ENSMUST00000071056.14	ENSMUSG00000030802.15	Bckdk	chr7	protein_coding	branched chain ketoacid dehydrogenase kinase
chr7	127513654	127514400	+	127511914	127514400	A5SS	0.5	50	50	ENSMUST00000206071.2	ENSMUSG00000030801.11	Kat8	chr7	protein_coding	K(lysine) acetyltransferase 8
chr7	127526442	127527087	-	127526442	127526981	A5SS	0.5	50	50	ENSMUST00000032988.10	ENSMUSG00000030800.11	Prss8	chr7	protein_coding	protease, serine 8 (prostasin)
chr7	127532664	127533682	-	127532664;127533004	127532739;127533682	ES	0.5	50	50	ENSMUST00000153110.8	ENSMUSG00000070371.12	Prss36	chr7	protein_coding	protease, serine 36
chr7	127533799	127534674	-	127533799	127534619	5pMXE	0.33	50	50	ENSMUST00000153110.8	ENSMUSG00000070371.12	Prss36	chr7	protein_coding	protease, serine 36
chr7	127532664	127533311	-	127532664	127532739	A5SS&ES	0.25	50	50	ENSMUST00000153110.8	ENSMUSG00000070371.12	Prss36	chr7	protein_coding	protease, serine 36
chr7	127532664	127533562	-	127532664	127532739	A5SS&ES	0.25	50	50	ENSMUST00000153110.8	ENSMUSG00000070371.12	Prss36	chr7	protein_coding	protease, serine 36
chr7	127533004	127533311	-	127533004	127533682	A5SS	0.5	50	50	ENSMUST00000153110.8	ENSMUSG00000070371.12	Prss36	chr7	protein_coding	protease, serine 36
chr7	127533799	127534575	-	127533799	127534619	A5SS	0.33	50	50	ENSMUST00000153110.8	ENSMUSG00000070371.12	Prss36	chr7	protein_coding	protease, serine 36
chr7	127532664	127533562	-	127532664;127533452	127533311;127533562	ES	0.5	50	50	ENSMUST00000152697.3	ENSMUSG00000070371.12	Prss36	chr7	protein_coding	protease, serine 36
chr7	127532664;127533004	127532739;127533311	-	127532664	127533311	cassetteExon	0.5	100	100	ENSMUST00000152697.3	ENSMUSG00000070371.12	Prss36	chr7	protein_coding	protease, serine 36
chr7	127532664	127533682	-	127532664	127533311	A5SS&ES	0.25	50	50	ENSMUST00000152697.3	ENSMUSG00000070371.12	Prss36	chr7	protein_coding	protease, serine 36
chr7	127535208	127535497	-	127535175	127535497	A3SS	0.5	50	50	ENSMUST00000118755.8	ENSMUSG00000070371.12	Prss36	chr7	protein_coding	protease, serine 36
chr7	127532286	127534619	-	127532286	127532543	A5SS&ES	0.5	50	50	ENSMUST00000118755.8	ENSMUSG00000070371.12	Prss36	chr7	protein_coding	protease, serine 36
chr7	127532664	127533682	-	127532664	127532739	A5SS&ES	0.25	50	50	ENSMUST00000118755.8	ENSMUSG00000070371.12	Prss36	chr7	protein_coding	protease, serine 36
chr7	127533799	127534575	-	127533799	127534674	A5SS	0.33	50	50	ENSMUST00000118755.8	ENSMUSG00000070371.12	Prss36	chr7	protein_coding	protease, serine 36
chr7	127532664	127533562	-	127532664	127533682	A5SS	0.25	50	50	ENSMUST00000141385.7	ENSMUSG00000070371.12	Prss36	chr7	protein_coding	protease, serine 36
chr7	127533799	127534619	-	127532286	127534619	A3SS	0.5	50	50	ENSMUST00000144192.2	ENSMUSG00000070371.12	Prss36	chr7	protein_coding	protease, serine 36
chr7	127568758	127571010	+	127568758;127569043	127568889;127571010	ES	0.5	50	50	ENSMUST00000106251.10	ENSMUSG00000030795.19	Fus	chr7	protein_coding	fused in sarcoma
chr7	127571942	127575060	+	127571942;127573606	127573572;127575060	ES	0.5	50	50	ENSMUST00000106251.10	ENSMUSG00000030795.19	Fus	chr7	protein_coding	fused in sarcoma
chr7	127569043	127571013	+	127569043	127571010	A3SS	0.5	50	50	ENSMUST00000106251.10	ENSMUSG00000030795.19	Fus	chr7	protein_coding	fused in sarcoma
chr7	127579165	127579382	+	127579165	127579295	A3SS	0.5	50	50	ENSMUST00000106251.10	ENSMUSG00000030795.19	Fus	chr7	protein_coding	fused in sarcoma
chr7	127568758	127571010	+	127568758	127568889	A3SS&ES	0.5	50	50	ENSMUST00000077609.12	ENSMUSG00000030795.19	Fus	chr7	protein_coding	fused in sarcoma
chr7	127571942	127575060	+	127573606	127575060	5pMXE	0.5	50	50	ENSMUST00000155941.8	ENSMUSG00000030795.19	Fus	chr7	protein_coding	fused in sarcoma
chr7	127716018	127725980	+	127716018	127716478	3pMXE	0.5	50	50	ENSMUST00000064821.14	ENSMUSG00000030786.19	Itgam	chr7	protein_coding	integrin alpha M
chr7	127667868	127669703	+	127667868	127669801	A3SS	0.33	50	50	ENSMUST00000064821.14	ENSMUSG00000030786.19	Itgam	chr7	protein_coding	integrin alpha M
chr7	127667868	127669772	+	127667868	127669801	A3SS	0.33	50	50	ENSMUST00000064821.14	ENSMUSG00000030786.19	Itgam	chr7	protein_coding	integrin alpha M
chr7	127700728	127700809	+	127700728	127700806	A3SS	0.5	50	50	ENSMUST00000064821.14	ENSMUSG00000030786.19	Itgam	chr7	protein_coding	integrin alpha M
chr7	127715675	127725980	+	127715675	127715908	3pMXE	0.5	50	50	ENSMUST00000120355.8	ENSMUSG00000030786.19	Itgam	chr7	protein_coding	integrin alpha M
chr7	127685244;127701018	127700588;127706800	+	127685244	127706800	cassetteExon	0.5	100	100	ENSMUST00000106240.9	ENSMUSG00000030786.19	Itgam	chr7	protein_coding	integrin alpha M
chr7	127667868	127669772	+	127667868	127669703	A3SS	0.33	50	50	ENSMUST00000119696.8	ENSMUSG00000030786.19	Itgam	chr7	protein_coding	integrin alpha M
chr7	127715675	127725980	+	127715675;127716018	127715908;127725980	ES	0.5	50	50	ENSMUST00000098015.10	ENSMUSG00000108596.2	Gm49368	chr7	protein_coding	predicted gene, 49368
chr7	127732585	127732838	+	127732585	127732833	A3SS	0.5	50	50	ENSMUST00000033053.8	ENSMUSG00000030789.10	Itgax	chr7	protein_coding	integrin alpha X
chr7	127802882	127803707	+	127802882;127803123	127803022;127803707	ES	0.5	50	50	ENSMUST00000106237.10	ENSMUSG00000070369.14	Itgad	chr7	protein_coding	integrin, alpha D
chr7	127803817	127822774	+	127803817	127804234	3pMXE	0.5	50	50	ENSMUST00000106237.10	ENSMUSG00000070369.14	Itgad	chr7	protein_coding	integrin, alpha D
chr7	127782290;127782619	127782512;127784822	+	127782290	127784822	cassetteExon	0.5	100	100	ENSMUST00000106237.10	ENSMUSG00000070369.14	Itgad	chr7	protein_coding	integrin, alpha D
chr7	127773196	127774805	+	127754007	127774805	A5SS	0.5	50	50	ENSMUST00000106237.10	ENSMUSG00000070369.14	Itgad	chr7	protein_coding	integrin, alpha D
chr7	127802882	127803707	+	127803123	127803707	5pMXE	0.5	50	50	ENSMUST00000176249.2	ENSMUSG00000070369.14	Itgad	chr7	protein_coding	integrin, alpha D
chr7	127802213	127802311	-	127792633	127802311	A3SS	0.5	50	50	ENSMUST00000205646.2	ENSMUSG00000108354.2	4931431B13Rik	chr7	lncRNA	RIKEN cDNA 4931431B13 gene
chr7	127847644	127848059	+	127847644;127847892	127847750;127848059	ES	0.5	50	50	ENSMUST00000164710.8	ENSMUSG00000030782.18	Tgfb1i1	chr7	protein_coding	transforming growth factor beta 1 induced transcript 1
chr7	127847892	127848262	+	127847892;127848146	127848059;127848262	ES	0.5	50	50	ENSMUST00000164710.8	ENSMUSG00000030782.18	Tgfb1i1	chr7	protein_coding	transforming growth factor beta 1 induced transcript 1
chr7	127846180;127847464	127847349;127847592	+	127846180	127847592	cassetteExon	0.5	100	100	ENSMUST00000164710.8	ENSMUSG00000030782.18	Tgfb1i1	chr7	protein_coding	transforming growth factor beta 1 induced transcript 1
chr7	127847644	127847816	+	127847644	127847750	A3SS	0.33	50	50	ENSMUST00000164710.8	ENSMUSG00000030782.18	Tgfb1i1	chr7	protein_coding	transforming growth factor beta 1 induced transcript 1
chr7	127847892	127848076	+	127847892	127848059	A3SS	0.33	50	50	ENSMUST00000164710.8	ENSMUSG00000030782.18	Tgfb1i1	chr7	protein_coding	transforming growth factor beta 1 induced transcript 1
chr7	127848146	127848293	+	127848146	127848262	A3SS	0.5	50	50	ENSMUST00000164710.8	ENSMUSG00000030782.18	Tgfb1i1	chr7	protein_coding	transforming growth factor beta 1 induced transcript 1
chr7	127846180	127847592	+	127847464	127847592	A5SS	0.5	50	50	ENSMUST00000070656.12	ENSMUSG00000030782.18	Tgfb1i1	chr7	protein_coding	transforming growth factor beta 1 induced transcript 1
chr7	127847644;127847892	127847750;127848262	+	127847644;127848146	127848059;127848262	MXE	0.5	100	100	ENSMUST00000169919.8	ENSMUSG00000030782.18	Tgfb1i1	chr7	protein_coding	transforming growth factor beta 1 induced transcript 1
chr7	127847644;127847892	127847816;127848059	+	127847644	127848059	cassetteExon	0.5	100	100	ENSMUST00000169919.8	ENSMUSG00000030782.18	Tgfb1i1	chr7	protein_coding	transforming growth factor beta 1 induced transcript 1
chr7	127847644;127847892	127847816;127848262	+	127847644;127848146	127848059;127848262	MXE	0.5	100	100	ENSMUST00000169919.8	ENSMUSG00000030782.18	Tgfb1i1	chr7	protein_coding	transforming growth factor beta 1 induced transcript 1
chr7	127847892	127848262	+	127847892	127848059	A3SS&ES	0.33	50	50	ENSMUST00000168825.8	ENSMUSG00000030782.18	Tgfb1i1	chr7	protein_coding	transforming growth factor beta 1 induced transcript 1
chr7	127847892	127848262	+	127847892;127848146	127848076;127848262	ES	0.5	50	50	ENSMUST00000166755.8	ENSMUSG00000030782.18	Tgfb1i1	chr7	protein_coding	transforming growth factor beta 1 induced transcript 1
chr7	127847644	127848059	+	127847644	127847750	A3SS	0.33	50	50	ENSMUST00000171888.8	ENSMUSG00000030782.18	Tgfb1i1	chr7	protein_coding	transforming growth factor beta 1 induced transcript 1
chr7	127847892	127848262	+	127848146	127848262	A5SS	0.5	50	50	ENSMUST00000171888.8	ENSMUSG00000030782.18	Tgfb1i1	chr7	protein_coding	transforming growth factor beta 1 induced transcript 1
chr7	127864988	127865665	+	127864988;127865576	127865517;127865665	ES	0.33	50	50	ENSMUST00000146735.2	ENSMUSG00000030781.14	Slc5a2	chr7	protein_coding	solute carrier family 5 (sodium/glucose cotransporter), member 2
chr7	127865588	127865665	+	127865576	127865665	A5SS	0.33	50	50	ENSMUST00000146735.2	ENSMUSG00000030781.14	Slc5a2	chr7	protein_coding	solute carrier family 5 (sodium/glucose cotransporter), member 2
chr7	127864988	127865665	+	127864988;127865588	127865517;127865665	ES	0.33	50	50	ENSMUST00000118169.8	ENSMUSG00000030781.14	Slc5a2	chr7	protein_coding	solute carrier family 5 (sodium/glucose cotransporter), member 2
chr7	127870124	127870921	+	127870124;127870422	127870207;127870921	ES	0.5	50	50	ENSMUST00000118169.8	ENSMUSG00000030781.14	Slc5a2	chr7	protein_coding	solute carrier family 5 (sodium/glucose cotransporter), member 2
chr7	127867984	127868202	+	127867984	127868125	A3SS	0.5	50	50	ENSMUST00000118169.8	ENSMUSG00000030781.14	Slc5a2	chr7	protein_coding	solute carrier family 5 (sodium/glucose cotransporter), member 2
chr7	127870124	127870287	+	127870124	127870207	A3SS	0.33	50	50	ENSMUST00000118169.8	ENSMUSG00000030781.14	Slc5a2	chr7	protein_coding	solute carrier family 5 (sodium/glucose cotransporter), member 2
chr7	127865886	127866509	+	127865769	127866509	A5SS	0.5	50	50	ENSMUST00000118169.8	ENSMUSG00000030781.14	Slc5a2	chr7	protein_coding	solute carrier family 5 (sodium/glucose cotransporter), member 2
chr7	127869559;127870124	127869692;127870207	+	127869559	127870207	cassetteExon	0.5	100	100	ENSMUST00000205720.2	ENSMUSG00000030781.14	Slc5a2	chr7	protein_coding	solute carrier family 5 (sodium/glucose cotransporter), member 2
chr7	127869559;127870124	127869692;127870921	+	127869559;127870422	127870207;127870921	MXE	0.5	100	100	ENSMUST00000205720.2	ENSMUSG00000030781.14	Slc5a2	chr7	protein_coding	solute carrier family 5 (sodium/glucose cotransporter), member 2
chr7	127864988	127865665	+	127865588	127865665	5pMXE	0.33	50	50	ENSMUST00000033045.11	ENSMUSG00000030781.14	Slc5a2	chr7	protein_coding	solute carrier family 5 (sodium/glucose cotransporter), member 2
chr7	127870124;127870422	127870287;127870921	+	127870124	127870921	cassetteExon	0.5	100	100	ENSMUST00000206716.2	ENSMUSG00000030781.14	Slc5a2	chr7	protein_coding	solute carrier family 5 (sodium/glucose cotransporter), member 2
chr7	127873895	127875258	-	127873875	127875258	A3SS	0.5	50	50	ENSMUST00000033044.16	ENSMUSG00000030780.16	Rusf1	chr7	protein_coding	RUS family member 1
chr7	127889807	127896634	-	127884386	127896634	A3SS	0.5	50	50	ENSMUST00000139452.8	ENSMUSG00000030780.16	Rusf1	chr7	protein_coding	RUS family member 1
chr7	127884386	127887436	-	127884386	127896634	A5SS	0.5	50	50	ENSMUST00000139452.8	ENSMUSG00000030780.16	Rusf1	chr7	protein_coding	RUS family member 1
chr7	128006201	128020305	-	128006201	128019790	5pMXE	0.5	50	50	ENSMUST00000033133.12	ENSMUSG00000030844.12	Rgs10	chr7	protein_coding	regulator of G-protein signalling 10
chr7	127975766	127977944	-	127975766	127990688	A5SS	0.5	50	50	ENSMUST00000033133.12	ENSMUSG00000030844.12	Rgs10	chr7	protein_coding	regulator of G-protein signalling 10
chr7	127990831	127995254	-	127990831	128004894	A5SS	0.5	50	50	ENSMUST00000033133.12	ENSMUSG00000030844.12	Rgs10	chr7	protein_coding	regulator of G-protein signalling 10
chr7	128045670;128045824	128045766;128046005	-	128045670	128046005	cassetteExon	0.5	100	100	ENSMUST00000106226.9	ENSMUSG00000030846.16	Tial1	chr7	protein_coding	Tia1 cytotoxic granule-associated RNA binding protein-like 1
chr7	128047994;128048522	128048455;128049845	-	128047994	128049845	cassetteExon	0.5	100	100	ENSMUST00000106226.9	ENSMUSG00000030846.16	Tial1	chr7	protein_coding	Tia1 cytotoxic granule-associated RNA binding protein-like 1
chr7	128047994;128048831	128048455;128049845	-	128047994	128049845	cassetteExon	0.5	100	100	ENSMUST00000106226.9	ENSMUSG00000030846.16	Tial1	chr7	protein_coding	Tia1 cytotoxic granule-associated RNA binding protein-like 1
chr7	128056756;128060380	128060321;128062849	-	128056756	128062849	cassetteExon	0.5	100	100	ENSMUST00000106226.9	ENSMUSG00000030846.16	Tial1	chr7	protein_coding	Tia1 cytotoxic granule-associated RNA binding protein-like 1
chr7	128050443	128056660	-	128050494	128056660	A3SS	0.33	50	50	ENSMUST00000106226.9	ENSMUSG00000030846.16	Tial1	chr7	protein_coding	Tia1 cytotoxic granule-associated RNA binding protein-like 1
chr7	128050120	128062849	-	128056756	128062849	A3SS&ES	0.33	50	50	ENSMUST00000205835.2	ENSMUSG00000030846.16	Tial1	chr7	protein_coding	Tia1 cytotoxic granule-associated RNA binding protein-like 1
chr7	128050443	128056660	-	128044383	128056660	A3SS	0.33	50	50	ENSMUST00000205835.2	ENSMUSG00000030846.16	Tial1	chr7	protein_coding	Tia1 cytotoxic granule-associated RNA binding protein-like 1
chr7	128050494	128056660	-	128044383	128056660	A3SS	0.33	50	50	ENSMUST00000205835.2	ENSMUSG00000030846.16	Tial1	chr7	protein_coding	Tia1 cytotoxic granule-associated RNA binding protein-like 1
chr7	128044383	128045531	-	128044383	128056660	A5SS	0.5	50	50	ENSMUST00000205835.2	ENSMUSG00000030846.16	Tial1	chr7	protein_coding	Tia1 cytotoxic granule-associated RNA binding protein-like 1
chr7	128048522	128049845	-	128048831	128049845	A3SS	0.33	50	50	ENSMUST00000123666.8	ENSMUSG00000030846.16	Tial1	chr7	protein_coding	Tia1 cytotoxic granule-associated RNA binding protein-like 1
chr7	128044383;128056756	128056660;128062849	-	128044383;128050120	128045531;128062849	MXE	0.5	100	100	ENSMUST00000141126.8	ENSMUSG00000030846.16	Tial1	chr7	protein_coding	Tia1 cytotoxic granule-associated RNA binding protein-like 1
chr7	128060380	128062849	-	128050120	128062849	A3SS	0.33	50	50	ENSMUST00000141126.8	ENSMUSG00000030846.16	Tial1	chr7	protein_coding	Tia1 cytotoxic granule-associated RNA binding protein-like 1
chr7	128050120	128050345	-	128050120	128062849	A5SS	0.5	50	50	ENSMUST00000141126.8	ENSMUSG00000030846.16	Tial1	chr7	protein_coding	Tia1 cytotoxic granule-associated RNA binding protein-like 1
chr7	128048522;128048831	128048763;128049845	-	128048522	128049845	cassetteExon	0.5	100	100	ENSMUST00000133089.8	ENSMUSG00000030846.16	Tial1	chr7	protein_coding	Tia1 cytotoxic granule-associated RNA binding protein-like 1
chr7	128271722	128277022	+	128271722	128272824	3pMXE	0.5	50	50	ENSMUST00000098007.11	ENSMUSG00000042105.19	Inpp5f	chr7	protein_coding	inositol polyphosphate-5-phosphatase F
chr7	128265490	128265686	+	128265490	128265701	A3SS	0.5	50	50	ENSMUST00000098007.11	ENSMUSG00000042105.19	Inpp5f	chr7	protein_coding	inositol polyphosphate-5-phosphatase F
chr7	128289331	128292351	+	128287008	128292351	A5SS	0.33	50	50	ENSMUST00000043138.13	ENSMUSG00000042105.19	Inpp5f	chr7	protein_coding	inositol polyphosphate-5-phosphatase F
chr7	128290970	128292351	+	128287008	128292351	A5SS	0.33	50	50	ENSMUST00000043138.13	ENSMUSG00000042105.19	Inpp5f	chr7	protein_coding	inositol polyphosphate-5-phosphatase F
chr7	128290970	128292351	+	128289331	128292351	A5SS	0.33	50	50	ENSMUST00000151237.5	ENSMUSG00000042105.19	Inpp5f	chr7	protein_coding	inositol polyphosphate-5-phosphatase F
chr7	128300294	128303967	-	128300294;128301131	128301043;128303967	ES	0.5	50	50	ENSMUST00000057557.14	ENSMUSG00000048170.15	Mcmbp	chr7	protein_coding	minichromosome maintenance complex binding protein
chr7	128300294	128300865	-	128300294	128301043	A5SS	0.33	50	50	ENSMUST00000057557.14	ENSMUSG00000048170.15	Mcmbp	chr7	protein_coding	minichromosome maintenance complex binding protein
chr7	128300294;128301131	128300865;128303967	-	128300294	128303967	cassetteExon	0.5	100	100	ENSMUST00000119081.2	ENSMUSG00000048170.15	Mcmbp	chr7	protein_coding	minichromosome maintenance complex binding protein
chr7	128300294	128303967	-	128300294	128300865	5pMXE	0.33	50	50	ENSMUST00000140714.2	ENSMUSG00000048170.15	Mcmbp	chr7	protein_coding	minichromosome maintenance complex binding protein
chr7	128300294	128303967	-	128301131	128303967	3pMXE	0.5	50	50	ENSMUST00000127807.2	ENSMUSG00000048170.15	Mcmbp	chr7	protein_coding	minichromosome maintenance complex binding protein
chr7	128346902	128354430	+	128346902;128352309	128351783;128354430	ES	0.5	50	50	ENSMUST00000042942.10	ENSMUSG00000055319.9	Sec23ip	chr7	protein_coding	Sec23 interacting protein
chr7	128347222	128351783	+	128346902	128351783	A5SS	0.5	50	50	ENSMUST00000042942.10	ENSMUSG00000055319.9	Sec23ip	chr7	protein_coding	Sec23 interacting protein
chr7	128346902	128351783	+	128346902	128354430	A3SS	0.5	50	50	ENSMUST00000205856.2	ENSMUSG00000055319.9	Sec23ip	chr7	protein_coding	Sec23 interacting protein
chr7	128352309	128354430	+	128346902	128354430	A5SS	0.5	50	50	ENSMUST00000205856.2	ENSMUSG00000055319.9	Sec23ip	chr7	protein_coding	Sec23 interacting protein
chr7	128923276	128981071	+	128923276;128925211	128925087;128981071	ES	0.5	50	50	ENSMUST00000094018.6	ENSMUSG00000070366.6	Plpp4	chr7	protein_coding	phospholipid phosphatase 4
chr7	128858893;128883244	128883118;128909348	+	128858893	128909348	cassetteExon	0.5	100	100	ENSMUST00000094018.6	ENSMUSG00000070366.6	Plpp4	chr7	protein_coding	phospholipid phosphatase 4
chr7	128923276	128925122	+	128923276	128925087	A3SS	0.33	50	50	ENSMUST00000094018.6	ENSMUSG00000070366.6	Plpp4	chr7	protein_coding	phospholipid phosphatase 4
chr7	128923276	128981071	+	128923276	128925087	3pMXE	0.33	50	50	ENSMUST00000206551.2	ENSMUSG00000070366.6	Plpp4	chr7	protein_coding	phospholipid phosphatase 4
chr7	128923276	128981071	+	128923276;128925211	128925122;128981071	ES	0.5	50	50	ENSMUST00000205630.2	ENSMUSG00000070366.6	Plpp4	chr7	protein_coding	phospholipid phosphatase 4
chr7	129208436	129209485	+	129208436;129208821	129208721;129209485	ES	0.5	50	50	ENSMUST00000084519.7	ENSMUSG00000042055.14	Wdr11	chr7	protein_coding	WD repeat domain 11
chr7	129226081	129226880	+	129226081;129226543	129226429;129226880	ES	0.5	50	50	ENSMUST00000084519.7	ENSMUSG00000042055.14	Wdr11	chr7	protein_coding	WD repeat domain 11
chr7	129231707	129232898	+	129231707;129232521	129232344;129232898	ES	0.5	50	50	ENSMUST00000084519.7	ENSMUSG00000042055.14	Wdr11	chr7	protein_coding	WD repeat domain 11
chr7	129208368	129208721	+	129208436	129208721	A5SS	0.5	50	50	ENSMUST00000084519.7	ENSMUSG00000042055.14	Wdr11	chr7	protein_coding	WD repeat domain 11
chr7	129208436	129209485	+	129208821	129209485	A5SS&ES	0.5	50	50	ENSMUST00000143849.8	ENSMUSG00000042055.14	Wdr11	chr7	protein_coding	WD repeat domain 11
chr7	129231707	129232898	+	129231707	129232344	A3SS	0.5	50	50	ENSMUST00000149541.8	ENSMUSG00000042055.14	Wdr11	chr7	protein_coding	WD repeat domain 11
chr7	129260872	129264255	+	129260872;129262684	129262471;129264255	ES	0.5	50	50	ENSMUST00000206679.2	ENSMUSG00000108580.2	Gm39094	chr7	lncRNA	predicted gene, 39094
chr7	129270170	129294830	+	129270170;129292933	129292850;129294830	ES	0.5	50	50	ENSMUST00000206954.2	ENSMUSG00000108481.2	Gm33248	chr7	lncRNA	predicted gene, 33248
chr7	129269256	129269957	+	129269256	129269920	A3SS	0.5	50	50	ENSMUST00000206954.2	ENSMUSG00000108481.2	Gm33248	chr7	lncRNA	predicted gene, 33248
chr7	129798104	129802713	-	129798104;129801635	129801488;129802713	ES	0.33	50	50	ENSMUST00000120187.9	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	129798104;129800293	129800149;129802713	-	129798104;129801635	129801488;129802713	MXE	0.5	100	100	ENSMUST00000120187.9	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	129820851;129828959	129828843;129830353	-	129820851	129830353	cassetteExon	0.5	100	100	ENSMUST00000120187.9	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	129830522;129843007	129842930;129863479	-	129830522	129863479	cassetteExon	0.5	100	100	ENSMUST00000120187.9	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	129765945	129769433	-	129765853	129769433	A3SS	0.33	50	50	ENSMUST00000120187.9	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	129765947	129769433	-	129765853	129769433	A3SS	0.33	50	50	ENSMUST00000120187.9	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	129844374	129863479	-	129830522	129863479	A3SS	0.25	50	50	ENSMUST00000120187.9	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	129787110	129797908	-	129787110	129797902	A5SS	0.5	50	50	ENSMUST00000120187.9	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	129863796	129865275	-	129863796	129867524	A5SS	0.5	50	50	ENSMUST00000120187.9	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	132601074	132683486	-	129774669	132683486	A3SS	0.14	50	50	ENSMUST00000124096.8	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	132616919	132683486	-	129774669	132683486	A3SS	0.14	50	50	ENSMUST00000124096.8	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	132627601	132683486	-	129774669	132683486	A3SS	0.14	50	50	ENSMUST00000124096.8	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	132631358	132683486	-	129774669	132683486	A3SS	0.14	50	50	ENSMUST00000124096.8	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	132645549	132683486	-	129774669	132683486	A3SS	0.14	50	50	ENSMUST00000124096.8	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	132654750	132683486	-	129774669	132683486	A3SS	0.14	50	50	ENSMUST00000124096.8	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	129774669	129779405	-	129774669	132683486	A5SS	0.5	50	50	ENSMUST00000124096.8	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	132683589	132684195	-	132683589	132724870	A5SS	0.2	50	50	ENSMUST00000124096.8	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	132683589	132713470	-	132683589	132724870	A5SS	0.2	50	50	ENSMUST00000124096.8	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	132683589	132714350	-	132683589	132724870	A5SS	0.2	50	50	ENSMUST00000124096.8	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	132683589	132724165	-	132683589	132724870	A5SS	0.2	50	50	ENSMUST00000124096.8	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	129798104	129820728	-	129798104;129802903	129802713;129820728	ES	0.5	50	50	ENSMUST00000153166.8	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	129843007	129863479	-	129843007;129844374	129844108;129863479	ES	0.25	50	50	ENSMUST00000153166.8	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	129798104;129800293	129800149;129802713	-	129798104	129802713	cassetteExon	0.5	100	100	ENSMUST00000153166.8	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	129765947	129769433	-	129765945	129769433	A3SS	0.33	50	50	ENSMUST00000130557.2	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	129830522	129863479	-	129802903	129863479	A3SS	0.25	50	50	ENSMUST00000121064.8	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	129843007	129863479	-	129802903	129863479	A3SS	0.25	50	50	ENSMUST00000121064.8	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	129844374	129863479	-	129802903	129863479	A3SS	0.25	50	50	ENSMUST00000121064.8	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	129798104	129820728	-	129798104	129801488	A5SS&ES	0.25	50	50	ENSMUST00000121064.8	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	129802903	129820728	-	129802903	129863479	A5SS	0.5	50	50	ENSMUST00000121064.8	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	129798104	129820728	-	129798104	129800149	A5SS&ES	0.25	50	50	ENSMUST00000117754.8	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	129798104;129802903	129802713;129863479	-	129798104;129844374	129820728;129863479	MXE	0.5	100	100	ENSMUST00000120715.8	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	129798104	129802713	-	129801635	129802713	3pMXE	0.33	50	50	ENSMUST00000127091.2	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	129800293	129802713	-	129801635	129802713	3pMXE	0.33	50	50	ENSMUST00000127091.2	ENSMUSG00000030849.19	Fgfr2	chr7	protein_coding	fibroblast growth factor receptor 2
chr7	130115554	130121086	-	130115554;130117898	130117835;130121086	ES	0.5	50	50	ENSMUST00000035458.15	ENSMUSG00000030850.18	Ate1	chr7	protein_coding	arginyltransferase 1
chr7	130117898	130121607	-	130117898	130121086	5pMXE	0.5	50	50	ENSMUST00000035458.15	ENSMUSG00000030850.18	Ate1	chr7	protein_coding	arginyltransferase 1
chr7	130069167;130106552	130106424;130109212	-	130069167;130105580	130083413;130109212	MXE	0.5	100	100	ENSMUST00000035458.15	ENSMUSG00000030850.18	Ate1	chr7	protein_coding	arginyltransferase 1
chr7	130083445;130106552	130106424;130109212	-	130083445;130105580	130105452;130109212	MXE	0.5	100	100	ENSMUST00000035458.15	ENSMUSG00000030850.18	Ate1	chr7	protein_coding	arginyltransferase 1
chr7	130105580;130106552	130106424;130109212	-	130105580	130109212	cassetteExon	0.5	100	100	ENSMUST00000035458.15	ENSMUSG00000030850.18	Ate1	chr7	protein_coding	arginyltransferase 1
chr7	130069167	130106424	-	130069167;130083445	130083413;130106424	ES	0.33	50	50	ENSMUST00000033139.15	ENSMUSG00000030850.18	Ate1	chr7	protein_coding	arginyltransferase 1
chr7	130083445;130105580	130105452;130106424	-	130083445	130106424	cassetteExon	0.5	100	100	ENSMUST00000033139.15	ENSMUSG00000030850.18	Ate1	chr7	protein_coding	arginyltransferase 1
chr7	130105580	130106424	-	130069167	130106424	A3SS	0.33	50	50	ENSMUST00000207041.2	ENSMUSG00000030850.18	Ate1	chr7	protein_coding	arginyltransferase 1
chr7	130105580	130109212	-	130106552	130109212	A3SS&ES	0.5	50	50	ENSMUST00000207041.2	ENSMUSG00000030850.18	Ate1	chr7	protein_coding	arginyltransferase 1
chr7	130115554	130121086	-	130115554	130117835	A5SS&ES	0.5	50	50	ENSMUST00000178534.8	ENSMUSG00000030850.18	Ate1	chr7	protein_coding	arginyltransferase 1
chr7	130129056	130130436	+	130129056	130130429	A3SS	0.33	50	50	ENSMUST00000210214.2	ENSMUSG00000099422.5	Gm4275	chr7	transcribed_unitary_pseudogene	predicted gene 4275
chr7	130129056	130130550	+	130129056	130130429	A3SS	0.33	50	50	ENSMUST00000210214.2	ENSMUSG00000099422.5	Gm4275	chr7	transcribed_unitary_pseudogene	predicted gene 4275
chr7	130127805	130128981	+	130125786	130128981	A5SS	0.5	50	50	ENSMUST00000210214.2	ENSMUSG00000099422.5	Gm4275	chr7	transcribed_unitary_pseudogene	predicted gene 4275
chr7	130129056	130130436	+	130129056	130130550	A3SS	0.33	50	50	ENSMUST00000210838.2	ENSMUSG00000099422.5	Gm4275	chr7	transcribed_unitary_pseudogene	predicted gene 4275
chr7	130144540;130145154	130145096;130147625	-	130144540	130147625	cassetteExon	0.5	100	100	ENSMUST00000160289.9	ENSMUSG00000040331.17	Nsmce4a	chr7	protein_coding	NSE4 homolog A, SMC5-SMC6 complex component
chr7	130144540	130145096	-	130144540	130174756	A5SS	0.33	50	50	ENSMUST00000159694.3	ENSMUSG00000040331.17	Nsmce4a	chr7	protein_coding	NSE4 homolog A, SMC5-SMC6 complex component
chr7	130144540	130147625	-	130144540	130174756	A5SS	0.33	50	50	ENSMUST00000159694.3	ENSMUSG00000040331.17	Nsmce4a	chr7	protein_coding	NSE4 homolog A, SMC5-SMC6 complex component
chr7	130228571	130264746	+	130228571;130229229	130229128;130264746	ES	0.2	50	50	ENSMUST00000207918.2	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130179246;130191756	130191700;130203567	+	130179246	130203567	cassetteExon	0.5	100	100	ENSMUST00000207918.2	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130198149	130203567	+	130179246	130203567	A5SS	0.33	50	50	ENSMUST00000207918.2	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130247296	130264746	+	130229229	130264746	A5SS	0.2	50	50	ENSMUST00000207918.2	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130248160	130264746	+	130229229	130264746	A5SS	0.2	50	50	ENSMUST00000207918.2	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130248160	130276332	+	130264871	130276332	A5SS&ES	0.5	50	50	ENSMUST00000207918.2	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130294717	130318433	+	130276469	130318433	A5SS	0.33	50	50	ENSMUST00000207918.2	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130315791	130318433	+	130276469	130318433	A5SS	0.33	50	50	ENSMUST00000207918.2	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130203667	130264746	+	130203667	130223451	3pMXE	0.5	50	50	ENSMUST00000215492.2	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130198149	130203567	+	130191756	130203567	A5SS	0.33	50	50	ENSMUST00000215492.2	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130331558;130333296	130333261;130335236	+	130331558	130335236	cassetteExon	0.5	100	100	ENSMUST00000207789.2	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130331558	130335248	+	130331558	130335236	A3SS	0.33	50	50	ENSMUST00000207789.2	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130344031	130345274	+	130344031	130352920	A3SS	0.5	50	50	ENSMUST00000207789.2	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130355391	130360897	+	130355391	130360895	A3SS	0.5	50	50	ENSMUST00000207789.2	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130361765	130362906	+	130361765	130365984	A3SS	0.5	50	50	ENSMUST00000207789.2	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130228571	130264746	+	130203667	130264746	A5SS	0.2	50	50	ENSMUST00000207789.2	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130229229	130264746	+	130203667	130264746	A5SS	0.2	50	50	ENSMUST00000207789.2	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130247296	130264746	+	130203667	130264746	A5SS	0.2	50	50	ENSMUST00000207789.2	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130248160	130264746	+	130203667	130264746	A5SS	0.2	50	50	ENSMUST00000207789.2	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130336958	130341542	+	130336880	130341542	A5SS	0.33	50	50	ENSMUST00000207789.2	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130336973	130341542	+	130336880	130341542	A5SS	0.33	50	50	ENSMUST00000207789.2	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130346346	130352920	+	130344031	130352920	A5SS	0.5	50	50	ENSMUST00000207789.2	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130203667	130264746	+	130203667;130228571	130223451;130264746	ES	0.2	50	50	ENSMUST00000084513.12	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130331558	130335248	+	130331558	130333261	A3SS&ES	0.33	50	50	ENSMUST00000084513.12	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130247296	130264746	+	130228571	130264746	A5SS	0.2	50	50	ENSMUST00000084513.12	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130248160	130264746	+	130228571	130264746	A5SS	0.2	50	50	ENSMUST00000084513.12	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130336973	130341542	+	130336958	130341542	A5SS	0.33	50	50	ENSMUST00000084513.12	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130248160	130264746	+	130247296	130264746	A5SS	0.2	50	50	ENSMUST00000208882.2	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130248160	130276332	+	130248160;130264871	130264746;130276332	ES	0.5	50	50	ENSMUST00000208106.2	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130315791	130318433	+	130294717	130318433	A5SS	0.33	50	50	ENSMUST00000208743.2	ENSMUSG00000030852.19	Tacc2	chr7	protein_coding	transforming, acidic coiled-coil containing protein 2
chr7	130378875	130381287	+	130378923	130381287	A5SS	0.5	50	50	ENSMUST00000207155.2	ENSMUSG00000040298.7	Btbd16	chr7	protein_coding	BTB (POZ) domain containing 16
chr7	130407670	130420748	+	130407670;130417537	130417446;130420748	ES	0.5	50	50	ENSMUST00000048453.7	ENSMUSG00000040298.7	Btbd16	chr7	protein_coding	BTB (POZ) domain containing 16
chr7	130422791	130423160	+	130422245	130423160	A5SS	0.5	50	50	ENSMUST00000048453.7	ENSMUSG00000040298.7	Btbd16	chr7	protein_coding	BTB (POZ) domain containing 16
chr7	130510155	130512562	+	130510155;130511465	130511318;130512562	ES	0.25	50	50	ENSMUST00000120441.8	ENSMUSG00000040268.18	Plekha1	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
chr7	130503975;130506287	130506049;130506600	+	130503975	130506600	cassetteExon	0.5	100	100	ENSMUST00000120441.8	ENSMUSG00000040268.18	Plekha1	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
chr7	130467730	130479464	+	130467713	130479464	A5SS	0.5	50	50	ENSMUST00000120441.8	ENSMUSG00000040268.18	Plekha1	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
chr7	130504006	130506600	+	130503975	130506600	A5SS	0.33	50	50	ENSMUST00000120441.8	ENSMUSG00000040268.18	Plekha1	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
chr7	130511358	130512562	+	130511465	130512562	A5SS	0.25	50	50	ENSMUST00000120441.8	ENSMUSG00000040268.18	Plekha1	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
chr7	130511388	130512562	+	130511465	130512562	A5SS	0.25	50	50	ENSMUST00000120441.8	ENSMUSG00000040268.18	Plekha1	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
chr7	130510155	130512562	+	130510155;130511358	130511318;130512562	ES	0.25	50	50	ENSMUST00000075181.11	ENSMUSG00000040268.18	Plekha1	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
chr7	130511388	130512562	+	130511358	130512562	A5SS	0.25	50	50	ENSMUST00000075181.11	ENSMUSG00000040268.18	Plekha1	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
chr7	130510155;130511388	130511318;130512562	+	130510155	130512562	cassetteExon	0.5	100	100	ENSMUST00000048180.12	ENSMUSG00000040268.18	Plekha1	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
chr7	130484116	130487133	+	130484116	130499055	A3SS	0.5	50	50	ENSMUST00000048180.12	ENSMUSG00000040268.18	Plekha1	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
chr7	130494008	130499055	+	130484116	130499055	A5SS	0.5	50	50	ENSMUST00000048180.12	ENSMUSG00000040268.18	Plekha1	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
chr7	130510155	130512562	+	130510155	130511318	3pMXE	0.5	50	50	ENSMUST00000136963.8	ENSMUSG00000040268.18	Plekha1	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
chr7	130504006	130506600	+	130506287	130506600	A5SS&ES	0.33	50	50	ENSMUST00000136963.8	ENSMUSG00000040268.18	Plekha1	chr7	protein_coding	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
chr7	130545324	130563243	+	130538473	130563243	A5SS	0.5	50	50	ENSMUST00000150717.8	ENSMUSG00000006205.14	Htra1	chr7	protein_coding	HtrA serine peptidase 1
chr7	130584511	130585390	+	130584024	130585390	A5SS	0.5	50	50	ENSMUST00000006367.8	ENSMUSG00000006205.14	Htra1	chr7	protein_coding	HtrA serine peptidase 1
chr7	130636437;130640779	130640747;130642617	+	130636437	130642617	cassetteExon	0.5	100	100	ENSMUST00000084509.7	ENSMUSG00000047517.14	Dmbt1	chr7	protein_coding	deleted in malignant brain tumors 1
chr7	130721407;130722601	130722520;130722798	+	130721407	130722798	cassetteExon	0.5	100	100	ENSMUST00000084509.7	ENSMUSG00000047517.14	Dmbt1	chr7	protein_coding	deleted in malignant brain tumors 1
chr7	130636437	130639552	+	130636437	130642617	A3SS	0.33	50	50	ENSMUST00000084509.7	ENSMUSG00000047517.14	Dmbt1	chr7	protein_coding	deleted in malignant brain tumors 1
chr7	130721087	130722798	+	130721407	130722798	A5SS&ES	0.33	50	50	ENSMUST00000084509.7	ENSMUSG00000047517.14	Dmbt1	chr7	protein_coding	deleted in malignant brain tumors 1
chr7	130636437	130640747	+	130636437;130639863	130639552;130640747	ES	0.5	50	50	ENSMUST00000213064.3	ENSMUSG00000047517.14	Dmbt1	chr7	protein_coding	deleted in malignant brain tumors 1
chr7	130660056	130663062	+	130660056	130671463	A3SS	0.5	50	50	ENSMUST00000213064.3	ENSMUSG00000047517.14	Dmbt1	chr7	protein_coding	deleted in malignant brain tumors 1
chr7	130672949	130674581	+	130672949	130682910	A3SS	0.5	50	50	ENSMUST00000213064.3	ENSMUSG00000047517.14	Dmbt1	chr7	protein_coding	deleted in malignant brain tumors 1
chr7	130668468	130671463	+	130660056	130671463	A5SS	0.5	50	50	ENSMUST00000213064.3	ENSMUSG00000047517.14	Dmbt1	chr7	protein_coding	deleted in malignant brain tumors 1
chr7	130681275	130682910	+	130672949	130682910	A5SS	0.5	50	50	ENSMUST00000213064.3	ENSMUSG00000047517.14	Dmbt1	chr7	protein_coding	deleted in malignant brain tumors 1
chr7	130721087	130722798	+	130722601	130722798	A5SS&ES	0.33	50	50	ENSMUST00000209015.3	ENSMUSG00000047517.14	Dmbt1	chr7	protein_coding	deleted in malignant brain tumors 1
chr7	130748257	130750130	+	130748257;130749402	130749364;130750130	ES	0.5	50	50	ENSMUST00000190866.7	ENSMUSG00000100759.7	1700029B22Rik	chr7	lncRNA	RIKEN cDNA 1700029B22 gene
chr7	130748270	130749364	+	130748257	130749364	A5SS	0.5	50	50	ENSMUST00000190866.7	ENSMUSG00000100759.7	1700029B22Rik	chr7	lncRNA	RIKEN cDNA 1700029B22 gene
chr7	130748257	130750130	+	130749402	130750130	A5SS&ES	0.5	50	50	ENSMUST00000186532.7	ENSMUSG00000100759.7	1700029B22Rik	chr7	lncRNA	RIKEN cDNA 1700029B22 gene
chr7	130783771	130785208	+	130783771	130790474	A3SS	0.5	50	50	ENSMUST00000050586.6	ENSMUSG00000006204.8	Cdcp3	chr7	protein_coding	CUB domain containing protein 3
chr7	130836826	130837373	+	130836826	130839695	A3SS	0.5	50	50	ENSMUST00000050586.6	ENSMUSG00000006204.8	Cdcp3	chr7	protein_coding	CUB domain containing protein 3
chr7	130790108	130790474	+	130783771	130790474	A5SS	0.5	50	50	ENSMUST00000050586.6	ENSMUSG00000006204.8	Cdcp3	chr7	protein_coding	CUB domain containing protein 3
chr7	130838561	130839695	+	130836826	130839695	A5SS	0.5	50	50	ENSMUST00000050586.6	ENSMUSG00000006204.8	Cdcp3	chr7	protein_coding	CUB domain containing protein 3
chr7	130936338	130937229	+	130935749	130937229	A5SS	0.33	50	50	ENSMUST00000207439.2	ENSMUSG00000030859.9	Fam24a	chr7	protein_coding	family with sequence similarity 24, member A
chr7	130936378	130937229	+	130935749	130937229	A5SS	0.33	50	50	ENSMUST00000207439.2	ENSMUSG00000030859.9	Fam24a	chr7	protein_coding	family with sequence similarity 24, member A
chr7	130936378	130937229	+	130936338	130937229	A5SS	0.33	50	50	ENSMUST00000207784.2	ENSMUSG00000030859.9	Fam24a	chr7	protein_coding	family with sequence similarity 24, member A
chr7	130963661	130964237	-	130963665	130964237	A3SS	0.5	50	50	ENSMUST00000059438.11	ENSMUSG00000040177.11	2310057M21Rik	chr7	protein_coding	RIKEN cDNA 2310057M21 gene
chr7	130945533	130950421	-	130945533	130952380	A5SS	0.5	50	50	ENSMUST00000059438.11	ENSMUSG00000040177.11	2310057M21Rik	chr7	protein_coding	RIKEN cDNA 2310057M21 gene
chr7	130963665	130963938	-	130963665	130964237	A5SS	0.33	50	50	ENSMUST00000059438.11	ENSMUSG00000040177.11	2310057M21Rik	chr7	protein_coding	RIKEN cDNA 2310057M21 gene
chr7	130963665	130964103	-	130963665	130964237	A5SS	0.33	50	50	ENSMUST00000059438.11	ENSMUSG00000040177.11	2310057M21Rik	chr7	protein_coding	RIKEN cDNA 2310057M21 gene
chr7	130963665	130963938	-	130963665	130964103	A5SS	0.33	50	50	ENSMUST00000207354.2	ENSMUSG00000040177.11	2310057M21Rik	chr7	protein_coding	RIKEN cDNA 2310057M21 gene
chr7	130973118	130975794	+	130973118;130975559	130975265;130975794	ES	0.5	50	50	ENSMUST00000075610.13	ENSMUSG00000063179.14	Pstk	chr7	protein_coding	phosphoseryl-tRNA kinase
chr7	130985729	130989347	+	130985729;130986322	130986229;130989347	ES	0.33	50	50	ENSMUST00000075610.13	ENSMUSG00000063179.14	Pstk	chr7	protein_coding	phosphoseryl-tRNA kinase
chr7	130986322	130994229	+	130986322	130989347	3pMXE	0.33	50	50	ENSMUST00000075610.13	ENSMUSG00000063179.14	Pstk	chr7	protein_coding	phosphoseryl-tRNA kinase
chr7	130986322;130986593	130986528;130989347	+	130986322	130989347	cassetteExon	0.5	100	100	ENSMUST00000075610.13	ENSMUSG00000063179.14	Pstk	chr7	protein_coding	phosphoseryl-tRNA kinase
chr7	130985729	130986240	+	130985729	130986229	A3SS	0.33	50	50	ENSMUST00000075610.13	ENSMUSG00000063179.14	Pstk	chr7	protein_coding	phosphoseryl-tRNA kinase
chr7	130985729	130989347	+	130985729;130986322	130986240;130989347	ES	0.33	50	50	ENSMUST00000145114.8	ENSMUSG00000063179.14	Pstk	chr7	protein_coding	phosphoseryl-tRNA kinase
chr7	130973118	130975794	+	130973118	130975265	3pMXE	0.5	50	50	ENSMUST00000207933.2	ENSMUSG00000063179.14	Pstk	chr7	protein_coding	phosphoseryl-tRNA kinase
chr7	130973118	130975794	+	130975559	130975794	5pMXE	0.5	50	50	ENSMUST00000128092.3	ENSMUSG00000063179.14	Pstk	chr7	protein_coding	phosphoseryl-tRNA kinase
chr7	130985729;130986593	130986229;130989347	+	130985729	130989347	cassetteExon	0.5	100	100	ENSMUST00000128092.3	ENSMUSG00000063179.14	Pstk	chr7	protein_coding	phosphoseryl-tRNA kinase
chr7	130985729;130986593	130986240;130989347	+	130985729	130989347	cassetteExon	0.5	100	100	ENSMUST00000128092.3	ENSMUSG00000063179.14	Pstk	chr7	protein_coding	phosphoseryl-tRNA kinase
chr7	130985729	130989347	+	130985729	130986229	A3SS&ES	0.33	50	50	ENSMUST00000207489.2	ENSMUSG00000063179.14	Pstk	chr7	protein_coding	phosphoseryl-tRNA kinase
chr7	130986322	130986528	+	130986322	130994229	A3SS	0.33	50	50	ENSMUST00000207489.2	ENSMUSG00000063179.14	Pstk	chr7	protein_coding	phosphoseryl-tRNA kinase
chr7	130985729	130989347	+	130986322	130989347	5pMXE	0.33	50	50	ENSMUST00000148533.2	ENSMUSG00000063179.14	Pstk	chr7	protein_coding	phosphoseryl-tRNA kinase
chr7	130998580;131010807	131010660;131012116	-	130998580	131012116	cassetteExon	0.5	100	100	ENSMUST00000046306.15	ENSMUSG00000040167.17	Ikzf5	chr7	protein_coding	IKAROS family zinc finger 5
chr7	130993850	130995484	-	130994309	130995484	A3SS	0.25	50	50	ENSMUST00000046306.15	ENSMUSG00000040167.17	Ikzf5	chr7	protein_coding	IKAROS family zinc finger 5
chr7	130994448	130995484	-	130994309	130995484	A3SS	0.25	50	50	ENSMUST00000046306.15	ENSMUSG00000040167.17	Ikzf5	chr7	protein_coding	IKAROS family zinc finger 5
chr7	130995362	130995484	-	130994309	130995484	A3SS	0.25	50	50	ENSMUST00000046306.15	ENSMUSG00000040167.17	Ikzf5	chr7	protein_coding	IKAROS family zinc finger 5
chr7	130998580	131012042	-	130998580	131012116	A5SS	0.33	50	50	ENSMUST00000046306.15	ENSMUSG00000040167.17	Ikzf5	chr7	protein_coding	IKAROS family zinc finger 5
chr7	130994448	130995484	-	130993850	130995484	A3SS	0.25	50	50	ENSMUST00000121033.8	ENSMUSG00000040167.17	Ikzf5	chr7	protein_coding	IKAROS family zinc finger 5
chr7	130995362	130995484	-	130993850	130995484	A3SS	0.25	50	50	ENSMUST00000121033.8	ENSMUSG00000040167.17	Ikzf5	chr7	protein_coding	IKAROS family zinc finger 5
chr7	130998580	131010660	-	130998580	131012042	A5SS	0.33	50	50	ENSMUST00000154602.8	ENSMUSG00000040167.17	Ikzf5	chr7	protein_coding	IKAROS family zinc finger 5
chr7	130995362	130995484	-	130994448	130995484	A3SS	0.25	50	50	ENSMUST00000207243.2	ENSMUSG00000040167.17	Ikzf5	chr7	protein_coding	IKAROS family zinc finger 5
chr7	131012516	131026166	+	131012516	131026201	A3SS	0.5	50	50	ENSMUST00000015829.15	ENSMUSG00000030861.16	Acadsb	chr7	protein_coding	acyl-Coenzyme A dehydrogenase, short/branched chain
chr7	131165214	131169913	+	131165214;131168080	131167922;131169913	ES	0.5	50	50	ENSMUST00000084502.7	ENSMUSG00000066979.7	Bub3	chr7	protein_coding	BUB3 mitotic checkpoint protein
chr7	131163335;131164091	131164027;131165063	+	131163335	131165063	cassetteExon	0.5	100	100	ENSMUST00000084502.7	ENSMUSG00000066979.7	Bub3	chr7	protein_coding	BUB3 mitotic checkpoint protein
chr7	131165214;131165434	131165362;131167922	+	131165214	131167922	cassetteExon	0.5	100	100	ENSMUST00000084502.7	ENSMUSG00000066979.7	Bub3	chr7	protein_coding	BUB3 mitotic checkpoint protein
chr7	131170090	131170334	+	131170090	131170234	A3SS	0.5	50	50	ENSMUST00000084502.7	ENSMUSG00000066979.7	Bub3	chr7	protein_coding	BUB3 mitotic checkpoint protein
chr7	131162637	131165063	+	131163335	131165063	A5SS&ES	0.33	50	50	ENSMUST00000084502.7	ENSMUSG00000066979.7	Bub3	chr7	protein_coding	BUB3 mitotic checkpoint protein
chr7	131162637	131165063	+	131164091	131165063	A5SS&ES	0.33	50	50	ENSMUST00000207736.2	ENSMUSG00000066979.7	Bub3	chr7	protein_coding	BUB3 mitotic checkpoint protein
chr7	131165214	131165362	+	131165214	131169913	A3SS	0.33	50	50	ENSMUST00000208571.2	ENSMUSG00000066979.7	Bub3	chr7	protein_coding	BUB3 mitotic checkpoint protein
chr7	131645875	131649444	-	131634587	131649444	A3SS	0.5	50	50	ENSMUST00000209155.2	ENSMUSG00000030862.14	Cpxm2	chr7	protein_coding	carboxypeptidase X 2 (M14 family)
chr7	131661706	131663796	-	131661659	131663796	A3SS	0.5	50	50	ENSMUST00000033149.5	ENSMUSG00000030862.14	Cpxm2	chr7	protein_coding	carboxypeptidase X 2 (M14 family)
chr7	131745495	131747104	-	131745495	131756015	A5SS	0.5	50	50	ENSMUST00000033149.5	ENSMUSG00000030862.14	Cpxm2	chr7	protein_coding	carboxypeptidase X 2 (M14 family)
chr7	131872730	131918776	-	131872730	131918034	5pMXE	0.33	50	50	ENSMUST00000077472.10	ENSMUSG00000030930.15	Chst15	chr7	protein_coding	carbohydrate sulfotransferase 15
chr7	131872730	131880190	-	131872730	131918034	A5SS	0.33	50	50	ENSMUST00000077472.10	ENSMUSG00000030930.15	Chst15	chr7	protein_coding	carbohydrate sulfotransferase 15
chr7	131872730	131880190	-	131872730	131918776	A5SS	0.33	50	50	ENSMUST00000080215.6	ENSMUSG00000030930.15	Chst15	chr7	protein_coding	carbohydrate sulfotransferase 15
chr7	132171869	132177240	-	132171869	132178024	A5SS	0.5	50	50	ENSMUST00000084500.8	ENSMUSG00000030934.10	Oat	chr7	protein_coding	ornithine aminotransferase
chr7	132199264	132201127	+	132199416	132201127	A5SS	0.33	50	50	ENSMUST00000138891.8	ENSMUSG00000087657.9	Gm16764	chr7	lncRNA	predicted gene, 16764
chr7	132200063	132201127	+	132199416	132201127	A5SS	0.33	50	50	ENSMUST00000138891.8	ENSMUSG00000087657.9	Gm16764	chr7	lncRNA	predicted gene, 16764
chr7	132199264;132200063	132200004;132201127	+	132199264	132201127	cassetteExon	0.5	100	100	ENSMUST00000164986.8	ENSMUSG00000087657.9	Gm16764	chr7	lncRNA	predicted gene, 16764
chr7	132212559	132232211	+	132212559;132219055	132218939;132232211	ES	0.25	50	50	ENSMUST00000148669.2	ENSMUSG00000030946.14	Lhpp	chr7	protein_coding	phospholysine phosphohistidine inorganic pyrophosphate phosphatase
chr7	132222672	132232211	+	132219055	132232211	A5SS	0.25	50	50	ENSMUST00000148669.2	ENSMUSG00000030946.14	Lhpp	chr7	protein_coding	phospholysine phosphohistidine inorganic pyrophosphate phosphatase
chr7	132223921	132232211	+	132219055	132232211	A5SS	0.25	50	50	ENSMUST00000148669.2	ENSMUSG00000030946.14	Lhpp	chr7	protein_coding	phospholysine phosphohistidine inorganic pyrophosphate phosphatase
chr7	132212559	132235730	+	132212559;132232398	132232211;132235730	ES	0.5	50	50	ENSMUST00000033241.6	ENSMUSG00000030946.14	Lhpp	chr7	protein_coding	phospholysine phosphohistidine inorganic pyrophosphate phosphatase
chr7	132244308	132307321	+	132244308;132252078	132251987;132307321	ES	0.5	50	50	ENSMUST00000033241.6	ENSMUSG00000030946.14	Lhpp	chr7	protein_coding	phospholysine phosphohistidine inorganic pyrophosphate phosphatase
chr7	132252078	132272095	+	132252078	132307321	A3SS	0.5	50	50	ENSMUST00000033241.6	ENSMUSG00000030946.14	Lhpp	chr7	protein_coding	phospholysine phosphohistidine inorganic pyrophosphate phosphatase
chr7	132222672	132232211	+	132212559	132232211	A5SS	0.25	50	50	ENSMUST00000033241.6	ENSMUSG00000030946.14	Lhpp	chr7	protein_coding	phospholysine phosphohistidine inorganic pyrophosphate phosphatase
chr7	132223921	132232211	+	132212559	132232211	A5SS	0.25	50	50	ENSMUST00000033241.6	ENSMUSG00000030946.14	Lhpp	chr7	protein_coding	phospholysine phosphohistidine inorganic pyrophosphate phosphatase
chr7	132212559	132218939	+	132212559	132235730	A3SS	0.33	50	50	ENSMUST00000133969.8	ENSMUSG00000030946.14	Lhpp	chr7	protein_coding	phospholysine phosphohistidine inorganic pyrophosphate phosphatase
chr7	132222672;132223921	132223761;132232211	+	132222672	132232211	cassetteExon	0.5	100	100	ENSMUST00000209903.2	ENSMUSG00000030946.14	Lhpp	chr7	protein_coding	phospholysine phosphohistidine inorganic pyrophosphate phosphatase
chr7	132212559	132235730	+	132232398	132235730	5pMXE	0.5	50	50	ENSMUST00000130672.2	ENSMUSG00000030946.14	Lhpp	chr7	protein_coding	phospholysine phosphohistidine inorganic pyrophosphate phosphatase
chr7	132317731	132373307	-	132317731;132361896	132361118;132373307	ES	0.5	50	50	ENSMUST00000097999.9	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132381114	132415310	-	132381114	132414795	5pMXE	0.12	50	50	ENSMUST00000097999.9	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132381114	132415492	-	132381114	132414795	5pMXE	0.12	50	50	ENSMUST00000097999.9	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132373358	132378485	-	132373358	132380865	A5SS	0.5	50	50	ENSMUST00000097999.9	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132381114	132381603	-	132381114	132414795	A5SS	0.12	50	50	ENSMUST00000097999.9	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132381114	132388597	-	132381114	132414795	A5SS	0.12	50	50	ENSMUST00000097999.9	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132381114	132404213	-	132381114	132414795	A5SS	0.12	50	50	ENSMUST00000097999.9	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132381114	132404236	-	132381114	132414795	A5SS	0.12	50	50	ENSMUST00000097999.9	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132381114	132409018	-	132381114	132414795	A5SS	0.12	50	50	ENSMUST00000097999.9	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132381114	132404213	-	132381114	132388597	5pMXE	0.12	50	50	ENSMUST00000065371.14	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132381114	132404236	-	132381114	132388597	5pMXE	0.12	50	50	ENSMUST00000065371.14	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132381114	132409018	-	132381114	132388597	5pMXE	0.12	50	50	ENSMUST00000065371.14	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132381114	132415310	-	132381114	132388597	5pMXE	0.12	50	50	ENSMUST00000065371.14	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132381114	132415492	-	132381114	132388597	5pMXE	0.12	50	50	ENSMUST00000065371.14	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132381114	132381603	-	132381114	132388597	A5SS	0.12	50	50	ENSMUST00000065371.14	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132361896	132373307	-	132317731	132373307	A3SS	0.5	50	50	ENSMUST00000097998.9	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132317731	132361118	-	132317731	132373307	A5SS	0.5	50	50	ENSMUST00000097998.9	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132381114	132381603	-	132381114	132415492	A5SS	0.12	50	50	ENSMUST00000097998.9	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132381114	132404213	-	132381114	132415492	A5SS	0.12	50	50	ENSMUST00000097998.9	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132381114	132404236	-	132381114	132415492	A5SS	0.12	50	50	ENSMUST00000097998.9	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132381114	132409018	-	132381114	132415492	A5SS	0.12	50	50	ENSMUST00000097998.9	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132381114	132415310	-	132381114	132415492	A5SS	0.12	50	50	ENSMUST00000097998.9	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132381114	132409018	-	132381114	132404236	5pMXE	0.12	50	50	ENSMUST00000106169.8	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132381114	132415310	-	132381114	132404236	5pMXE	0.12	50	50	ENSMUST00000106169.8	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132381114	132381603	-	132381114	132404236	A5SS	0.12	50	50	ENSMUST00000106169.8	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132381114	132404213	-	132381114	132404236	A5SS	0.12	50	50	ENSMUST00000106169.8	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132381114	132381603	-	132381114	132415310	A5SS	0.12	50	50	ENSMUST00000134946.3	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132381114	132404213	-	132381114	132415310	A5SS	0.12	50	50	ENSMUST00000134946.3	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132381114	132409018	-	132381114	132415310	A5SS	0.12	50	50	ENSMUST00000134946.3	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132381114	132381603	-	132381114	132409018	A5SS	0.12	50	50	ENSMUST00000140865.3	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132381114	132404213	-	132381114	132409018	A5SS	0.12	50	50	ENSMUST00000140865.3	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132381114	132404213	-	132381114	132381603	5pMXE	0.12	50	50	ENSMUST00000146460.2	ENSMUSG00000030956.16	Fam53b	chr7	protein_coding	family with sequence similarity 53, member B
chr7	132429611	132438829	-	132429611;132433305	132433089;132438829	ES	0.5	50	50	ENSMUST00000033257.15	ENSMUSG00000030960.17	Eef1akmt2	chr7	protein_coding	EEF1A lysine methyltransferase 2
chr7	132438936	132453155	-	132438936;132452438	132452324;132453155	ES	0.5	50	50	ENSMUST00000033257.15	ENSMUSG00000030960.17	Eef1akmt2	chr7	protein_coding	EEF1A lysine methyltransferase 2
chr7	132438936	132452320	-	132438936	132452324	A5SS	0.33	50	50	ENSMUST00000033257.15	ENSMUSG00000030960.17	Eef1akmt2	chr7	protein_coding	EEF1A lysine methyltransferase 2
chr7	132453220	132453941	-	132453220	132454228	A5SS	0.5	50	50	ENSMUST00000033257.15	ENSMUSG00000030960.17	Eef1akmt2	chr7	protein_coding	EEF1A lysine methyltransferase 2
chr7	132429611;132438936	132438829;132452324	-	132429611	132452324	cassetteExon	0.5	100	100	ENSMUST00000120425.8	ENSMUSG00000030960.17	Eef1akmt2	chr7	protein_coding	EEF1A lysine methyltransferase 2
chr7	132429611;132438936	132438829;132453155	-	132429611;132452438	132452324;132453155	MXE	0.5	100	100	ENSMUST00000120425.8	ENSMUSG00000030960.17	Eef1akmt2	chr7	protein_coding	EEF1A lysine methyltransferase 2
chr7	132429611	132433089	-	132429611	132452324	A5SS	0.33	50	50	ENSMUST00000120425.8	ENSMUSG00000030960.17	Eef1akmt2	chr7	protein_coding	EEF1A lysine methyltransferase 2
chr7	132438936	132453155	-	132438936;132452438	132452320;132453155	ES	0.5	50	50	ENSMUST00000135932.8	ENSMUSG00000030960.17	Eef1akmt2	chr7	protein_coding	EEF1A lysine methyltransferase 2
chr7	132429611	132452324	-	132429611	132438829	A5SS&ES	0.33	50	50	ENSMUST00000135932.8	ENSMUSG00000030960.17	Eef1akmt2	chr7	protein_coding	EEF1A lysine methyltransferase 2
chr7	132429611	132438829	-	132433305	132438829	3pMXE	0.5	50	50	ENSMUST00000152410.8	ENSMUSG00000030960.17	Eef1akmt2	chr7	protein_coding	EEF1A lysine methyltransferase 2
chr7	132438936	132453155	-	132452438	132453155	3pMXE	0.5	50	50	ENSMUST00000154914.2	ENSMUSG00000030960.17	Eef1akmt2	chr7	protein_coding	EEF1A lysine methyltransferase 2
chr7	132476746	132478365	+	132476746	132478327	A3SS	0.5	50	50	ENSMUST00000084497.12	ENSMUSG00000030965.20	Abraxas2	chr7	protein_coding	BRISC complex subunit
chr7	132466712	132470762	+	132466782	132470762	A5SS	0.5	50	50	ENSMUST00000084497.12	ENSMUSG00000030965.20	Abraxas2	chr7	protein_coding	BRISC complex subunit
chr7	132466782	132476556	+	132473367	132476556	A5SS&ES	0.5	50	50	ENSMUST00000147786.9	ENSMUSG00000030965.20	Abraxas2	chr7	protein_coding	BRISC complex subunit
chr7	132466782	132470762	+	132466782	132476556	A3SS	0.5	50	50	ENSMUST00000134784.2	ENSMUSG00000030965.20	Abraxas2	chr7	protein_coding	BRISC complex subunit
chr7	132491807	132494875	-	132476767	132494875	A3SS	0.5	50	50	ENSMUST00000209767.2	ENSMUSG00000097595.3	1500002F19Rik	chr7	lncRNA	RIKEN cDNA 1500002F19 gene
chr7	132476767	132490284	-	132476767	132494875	A5SS	0.5	50	50	ENSMUST00000209767.2	ENSMUSG00000097595.3	1500002F19Rik	chr7	lncRNA	RIKEN cDNA 1500002F19 gene
chr7	132549937	132551314	+	132533274	132551314	A5SS	0.5	50	50	ENSMUST00000106157.8	ENSMUSG00000030967.16	Zranb1	chr7	protein_coding	zinc finger, RAN-binding domain containing 1
chr7	132568423	132572915	+	132568423	132583010	A3SS	0.5	50	50	ENSMUST00000210507.2	ENSMUSG00000030967.16	Zranb1	chr7	protein_coding	zinc finger, RAN-binding domain containing 1
chr7	132575352	132583010	+	132568423	132583010	A5SS	0.5	50	50	ENSMUST00000210507.2	ENSMUSG00000030967.16	Zranb1	chr7	protein_coding	zinc finger, RAN-binding domain containing 1
chr7	132601074	132625292	-	132601074	132615247	5pMXE	0.25	50	50	ENSMUST00000169570.8	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132601074	132627442	-	132601074	132615247	5pMXE	0.25	50	50	ENSMUST00000169570.8	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132601074	132683486	-	132601074	132615247	5pMXE	0.25	50	50	ENSMUST00000169570.8	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132601074;132627601	132627442;132683486	-	132601074	132683486	cassetteExon	0.5	100	100	ENSMUST00000166439.8	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132616919	132683486	-	132601074	132683486	A3SS	0.16	50	50	ENSMUST00000166439.8	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132631358	132683486	-	132601074	132683486	A3SS	0.16	50	50	ENSMUST00000166439.8	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132645549	132683486	-	132601074	132683486	A3SS	0.16	50	50	ENSMUST00000166439.8	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132654750	132683486	-	132601074	132683486	A3SS	0.16	50	50	ENSMUST00000166439.8	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132601074	132625292	-	132601074	132683486	A5SS	0.25	50	50	ENSMUST00000166439.8	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132627601;132631358	132631200;132683486	-	132627601	132683486	cassetteExon	0.5	100	100	ENSMUST00000033269.15	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132627601;132654750	132654581;132683486	-	132627601	132683486	cassetteExon	0.5	100	100	ENSMUST00000033269.15	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132616919	132627442	-	132601074	132627442	A3SS	0.25	50	50	ENSMUST00000033269.15	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132616919	132683486	-	132627601	132683486	A3SS&ES	0.16	50	50	ENSMUST00000033269.15	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132617065	132627442	-	132601074	132627442	A3SS	0.25	50	50	ENSMUST00000033269.15	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132617105	132627442	-	132601074	132627442	A3SS	0.25	50	50	ENSMUST00000033269.15	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132645549	132683486	-	132627601	132683486	A3SS	0.16	50	50	ENSMUST00000033269.15	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132601074	132625292	-	132601074	132627442	A5SS	0.25	50	50	ENSMUST00000033269.15	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132683589	132713470	-	132683589	132684195	A5SS&ES	0.33	50	50	ENSMUST00000172341.8	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132683589	132714350	-	132683589	132684195	A5SS&ES	0.33	50	50	ENSMUST00000172341.8	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132627601;132654750	132654581;132683486	-	132627601;132631358	132631200;132683486	MXE	0.5	100	100	ENSMUST00000165534.8	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132617065	132627442	-	132616919	132627442	A3SS	0.25	50	50	ENSMUST00000165534.8	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132617105	132627442	-	132616919	132627442	A3SS	0.25	50	50	ENSMUST00000165534.8	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132645549	132683486	-	132631358	132683486	A3SS	0.2	50	50	ENSMUST00000165534.8	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132631358	132631720	-	132631358	132683486	A5SS	0.5	50	50	ENSMUST00000165534.8	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132616919	132683486	-	132616919;132627601	132627442;132683486	ES	0.2	50	50	ENSMUST00000166400.8	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132631358	132683486	-	132616919	132683486	A3SS	0.14	50	50	ENSMUST00000163601.8	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132645549	132683486	-	132616919	132683486	A3SS	0.14	50	50	ENSMUST00000163601.8	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132654750	132683486	-	132616919	132683486	A3SS	0.14	50	50	ENSMUST00000163601.8	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132683589	132724165	-	132683589	132714350	5pMXE	0.2	50	50	ENSMUST00000171727.8	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132683589	132713470	-	132683589	132714350	A5SS	0.2	50	50	ENSMUST00000171727.8	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132725085	132726018	-	132725085	132725387	5pMXE	0.5	50	50	ENSMUST00000164896.8	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132617105	132627442	-	132617065	132627442	A3SS	0.25	50	50	ENSMUST00000167218.8	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132683589	132684195	-	132683589	132724165	A5SS	0.2	50	50	ENSMUST00000167218.8	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132683589	132713470	-	132683589	132724165	A5SS	0.2	50	50	ENSMUST00000167218.8	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132601074	132683486	-	132627601	132683486	3pMXE	0.14	50	50	ENSMUST00000171882.8	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	132645549	132683486	-	132654750	132683486	A3SS&ES	0.25	50	50	ENSMUST00000171022.8	ENSMUSG00000030970.17	Ctbp2	chr7	protein_coding	C-terminal binding protein 2
chr7	133245878	133249074	+	133245878;133248820	133248719;133249074	ES	0.5	50	50	ENSMUST00000051169.13	ENSMUSG00000039990.17	Edrf1	chr7	protein_coding	erythroid differentiation regulatory factor 1
chr7	133260373	133261865	+	133260373	133261800	A3SS	0.5	50	50	ENSMUST00000051169.13	ENSMUSG00000039990.17	Edrf1	chr7	protein_coding	erythroid differentiation regulatory factor 1
chr7	133269420	133273098	+	133269420	133273095	A3SS	0.5	50	50	ENSMUST00000051169.13	ENSMUSG00000039990.17	Edrf1	chr7	protein_coding	erythroid differentiation regulatory factor 1
chr7	133276434	133277591	-	133276434;133276767	133276595;133277591	ES	0.5	50	50	ENSMUST00000033278.8	ENSMUSG00000030981.10	Mmp21	chr7	protein_coding	matrix metallopeptidase 21
chr7	133302639	133304059	-	133302639;133303651	133303568;133304059	ES	0.5	50	50	ENSMUST00000135760.8	ENSMUSG00000030979.14	Uros	chr7	protein_coding	uroporphyrinogen III synthase
chr7	133304198	133311458	-	133304198	133310738	5pMXE	0.33	50	50	ENSMUST00000135760.8	ENSMUSG00000030979.14	Uros	chr7	protein_coding	uroporphyrinogen III synthase
chr7	133294385	133299398	-	133292895	133299398	A3SS	0.5	50	50	ENSMUST00000135760.8	ENSMUSG00000030979.14	Uros	chr7	protein_coding	uroporphyrinogen III synthase
chr7	133304331	133310738	-	133304198	133310738	A3SS	0.5	50	50	ENSMUST00000135760.8	ENSMUSG00000030979.14	Uros	chr7	protein_coding	uroporphyrinogen III synthase
chr7	133299472	133299709	-	133299472	133300873	A5SS	0.5	50	50	ENSMUST00000135760.8	ENSMUSG00000030979.14	Uros	chr7	protein_coding	uroporphyrinogen III synthase
chr7	133304198	133310653	-	133304198	133310738	A5SS	0.33	50	50	ENSMUST00000135760.8	ENSMUSG00000030979.14	Uros	chr7	protein_coding	uroporphyrinogen III synthase
chr7	133304198	133310653	-	133304148	133310653	A3SS	0.5	50	50	ENSMUST00000106146.8	ENSMUSG00000030979.14	Uros	chr7	protein_coding	uroporphyrinogen III synthase
chr7	133304198	133311458	-	133304198	133310653	5pMXE	0.33	50	50	ENSMUST00000106145.10	ENSMUSG00000030979.14	Uros	chr7	protein_coding	uroporphyrinogen III synthase
chr7	133302639	133304059	-	133303651	133304059	3pMXE	0.5	50	50	ENSMUST00000153698.3	ENSMUSG00000030979.14	Uros	chr7	protein_coding	uroporphyrinogen III synthase
chr7	133316526	133316628	+	133315991	133316628	A5SS	0.5	50	50	ENSMUST00000033282.5	ENSMUSG00000030983.5	Bccip	chr7	protein_coding	BRCA2 and CDKN1A interacting protein
chr7	133344530	133361129	-	133344530;133350765	133350572;133361129	ES	0.33	50	50	ENSMUST00000033290.12	ENSMUSG00000030986.14	Dhx32	chr7	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 32
chr7	133350765	133378331	-	133350765;133361642	133361129;133378331	ES	0.5	50	50	ENSMUST00000033290.12	ENSMUSG00000030986.14	Dhx32	chr7	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 32
chr7	133361642	133384397	-	133361642	133378331	5pMXE	0.2	50	50	ENSMUST00000033290.12	ENSMUSG00000030986.14	Dhx32	chr7	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 32
chr7	133350720	133361129	-	133350765	133361129	A3SS	0.33	50	50	ENSMUST00000033290.12	ENSMUSG00000030986.14	Dhx32	chr7	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 32
chr7	133327124	133332460	-	133327124	133335697	A5SS	0.5	50	50	ENSMUST00000033290.12	ENSMUSG00000030986.14	Dhx32	chr7	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 32
chr7	133361642	133361750	-	133361642	133378331	A5SS	0.2	50	50	ENSMUST00000033290.12	ENSMUSG00000030986.14	Dhx32	chr7	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 32
chr7	133361642	133377871	-	133361642	133378331	A5SS	0.2	50	50	ENSMUST00000033290.12	ENSMUSG00000030986.14	Dhx32	chr7	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 32
chr7	133361642	133378190	-	133361642	133378331	A5SS	0.2	50	50	ENSMUST00000033290.12	ENSMUSG00000030986.14	Dhx32	chr7	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 32
chr7	133361642	133377871	-	133361642	133361750	5pMXE	0.2	50	50	ENSMUST00000140593.9	ENSMUSG00000030986.14	Dhx32	chr7	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 32
chr7	133361642	133378190	-	133361642	133361750	5pMXE	0.2	50	50	ENSMUST00000140593.9	ENSMUSG00000030986.14	Dhx32	chr7	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 32
chr7	133361642	133384397	-	133361642	133361750	5pMXE	0.2	50	50	ENSMUST00000140593.9	ENSMUSG00000030986.14	Dhx32	chr7	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 32
chr7	133361642	133378331	-	133350765	133378331	A3SS	0.5	50	50	ENSMUST00000106139.8	ENSMUSG00000030986.14	Dhx32	chr7	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 32
chr7	133344530	133361129	-	133344530	133350572	A5SS&ES	0.5	50	50	ENSMUST00000106139.8	ENSMUSG00000030986.14	Dhx32	chr7	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 32
chr7	133350765	133361129	-	133350765	133378331	A5SS	0.5	50	50	ENSMUST00000106139.8	ENSMUSG00000030986.14	Dhx32	chr7	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 32
chr7	133361642	133377871	-	133361642	133384397	A5SS	0.2	50	50	ENSMUST00000063669.8	ENSMUSG00000030986.14	Dhx32	chr7	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 32
chr7	133361642	133378190	-	133361642	133384397	A5SS	0.2	50	50	ENSMUST00000063669.8	ENSMUSG00000030986.14	Dhx32	chr7	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 32
chr7	133344530;133350720	133350572;133361129	-	133344530	133361129	cassetteExon	0.5	100	100	ENSMUST00000211450.2	ENSMUSG00000030986.14	Dhx32	chr7	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 32
chr7	133344530;133350765	133350572;133378331	-	133344530;133361642	133361129;133378331	MXE	0.5	100	100	ENSMUST00000211450.2	ENSMUSG00000030986.14	Dhx32	chr7	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 32
chr7	133344530	133361129	-	133350765	133361129	3pMXE	0.33	50	50	ENSMUST00000146211.2	ENSMUSG00000030986.14	Dhx32	chr7	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 32
chr7	133344530	133361129	-	133350720	133361129	3pMXE	0.33	50	50	ENSMUST00000149876.2	ENSMUSG00000030986.14	Dhx32	chr7	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 32
chr7	133361642	133377871	-	133361642	133378190	A5SS	0.2	50	50	ENSMUST00000130182.2	ENSMUSG00000030986.14	Dhx32	chr7	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 32
chr7	133378699;133400577	133400444;133454895	+	133378699	133454895	cassetteExon	0.5	100	100	ENSMUST00000065359.12	ENSMUSG00000053111.14	Fank1	chr7	protein_coding	fibronectin type 3 and ankyrin repeat domains 1
chr7	133378699;133433792	133433705;133454895	+	133378699	133454895	cassetteExon	0.5	100	100	ENSMUST00000065359.12	ENSMUSG00000053111.14	Fank1	chr7	protein_coding	fibronectin type 3 and ankyrin repeat domains 1
chr7	133391286	133454895	+	133378699	133454895	A5SS	0.25	50	50	ENSMUST00000065359.12	ENSMUSG00000053111.14	Fank1	chr7	protein_coding	fibronectin type 3 and ankyrin repeat domains 1
chr7	133378699;133400577	133400444;133454895	+	133378699;133433792	133433705;133454895	MXE	0.5	100	100	ENSMUST00000209511.2	ENSMUSG00000053111.14	Fank1	chr7	protein_coding	fibronectin type 3 and ankyrin repeat domains 1
chr7	133391286	133454895	+	133433792	133454895	A5SS&ES	0.25	50	50	ENSMUST00000209511.2	ENSMUSG00000053111.14	Fank1	chr7	protein_coding	fibronectin type 3 and ankyrin repeat domains 1
chr7	133391286	133454895	+	133400577	133454895	A5SS&ES	0.25	50	50	ENSMUST00000151031.2	ENSMUSG00000053111.14	Fank1	chr7	protein_coding	fibronectin type 3 and ankyrin repeat domains 1
chr7	133455072	133463832	+	133455072	133482327	A3SS	0.5	50	50	ENSMUST00000121560.2	ENSMUSG00000053111.14	Fank1	chr7	protein_coding	fibronectin type 3 and ankyrin repeat domains 1
chr7	133482217	133482327	+	133455072	133482327	A5SS	0.5	50	50	ENSMUST00000121560.2	ENSMUSG00000053111.14	Fank1	chr7	protein_coding	fibronectin type 3 and ankyrin repeat domains 1
chr7	133774609	133833657	-	133774609	133826516	5pMXE	0.33	50	50	ENSMUST00000067680.11	ENSMUSG00000054555.12	Adam12	chr7	protein_coding	a disintegrin and metallopeptidase domain 12 (meltrin alpha)
chr7	133774609	133833753	-	133774609	133826516	5pMXE	0.33	50	50	ENSMUST00000067680.11	ENSMUSG00000054555.12	Adam12	chr7	protein_coding	a disintegrin and metallopeptidase domain 12 (meltrin alpha)
chr7	133793089	133826516	-	133774609	133826516	A3SS	0.5	50	50	ENSMUST00000067680.11	ENSMUSG00000054555.12	Adam12	chr7	protein_coding	a disintegrin and metallopeptidase domain 12 (meltrin alpha)
chr7	133774609	133833753	-	133774609	133833657	5pMXE	0.33	50	50	ENSMUST00000134504.8	ENSMUSG00000054555.12	Adam12	chr7	protein_coding	a disintegrin and metallopeptidase domain 12 (meltrin alpha)
chr7	133789529	133833753	-	133774609	133833753	A3SS	0.5	50	50	ENSMUST00000127524.2	ENSMUSG00000054555.12	Adam12	chr7	protein_coding	a disintegrin and metallopeptidase domain 12 (meltrin alpha)
chr7	133951557;133959815	133959724;133978446	-	133951557	133978446	cassetteExon	0.5	100	100	ENSMUST00000094002.10	ENSMUSG00000030994.17	D7Ertd443e	chr7	protein_coding	DNA segment, Chr 7, ERATO Doi 443, expressed
chr7	133977771	133978446	-	133951557	133978446	A3SS	0.33	50	50	ENSMUST00000094002.10	ENSMUSG00000030994.17	D7Ertd443e	chr7	protein_coding	DNA segment, Chr 7, ERATO Doi 443, expressed
chr7	133900129	133938106	-	133900129	133950441	A5SS	0.5	50	50	ENSMUST00000094002.10	ENSMUSG00000030994.17	D7Ertd443e	chr7	protein_coding	DNA segment, Chr 7, ERATO Doi 443, expressed
chr7	133959815	133967085	-	133959815	133966460	5pMXE	0.2	50	50	ENSMUST00000172947.8	ENSMUSG00000030994.17	D7Ertd443e	chr7	protein_coding	DNA segment, Chr 7, ERATO Doi 443, expressed
chr7	133959815	133976766	-	133959815	133966460	5pMXE	0.2	50	50	ENSMUST00000172947.8	ENSMUSG00000030994.17	D7Ertd443e	chr7	protein_coding	DNA segment, Chr 7, ERATO Doi 443, expressed
chr7	133959815	133978446	-	133959815	133966460	5pMXE	0.2	50	50	ENSMUST00000172947.8	ENSMUSG00000030994.17	D7Ertd443e	chr7	protein_coding	DNA segment, Chr 7, ERATO Doi 443, expressed
chr7	133959815	134061823	-	133959815	133966460	5pMXE	0.2	50	50	ENSMUST00000172947.8	ENSMUSG00000030994.17	D7Ertd443e	chr7	protein_coding	DNA segment, Chr 7, ERATO Doi 443, expressed
chr7	133956200	133959724	-	133951557	133959724	A3SS	0.5	50	50	ENSMUST00000172947.8	ENSMUSG00000030994.17	D7Ertd443e	chr7	protein_coding	DNA segment, Chr 7, ERATO Doi 443, expressed
chr7	133900129	133950441	-	133871986	133950441	A3SS	0.5	50	50	ENSMUST00000174700.2	ENSMUSG00000030994.17	D7Ertd443e	chr7	protein_coding	DNA segment, Chr 7, ERATO Doi 443, expressed
chr7	133871986	133894957	-	133871986	133950441	A5SS	0.5	50	50	ENSMUST00000174700.2	ENSMUSG00000030994.17	D7Ertd443e	chr7	protein_coding	DNA segment, Chr 7, ERATO Doi 443, expressed
chr7	134027388	134100589	-	134061898	134100589	A3SS&ES	0.5	50	50	ENSMUST00000238294.2	ENSMUSG00000030994.17	D7Ertd443e	chr7	protein_coding	DNA segment, Chr 7, ERATO Doi 443, expressed
chr7	133951557	133978446	-	133951557	133959724	A5SS&ES	0.5	50	50	ENSMUST00000238294.2	ENSMUSG00000030994.17	D7Ertd443e	chr7	protein_coding	DNA segment, Chr 7, ERATO Doi 443, expressed
chr7	133959815	133967085	-	133959815	134061823	A5SS	0.2	50	50	ENSMUST00000238294.2	ENSMUSG00000030994.17	D7Ertd443e	chr7	protein_coding	DNA segment, Chr 7, ERATO Doi 443, expressed
chr7	133959815	133976766	-	133959815	134061823	A5SS	0.2	50	50	ENSMUST00000238294.2	ENSMUSG00000030994.17	D7Ertd443e	chr7	protein_coding	DNA segment, Chr 7, ERATO Doi 443, expressed
chr7	133959815	133978446	-	133959815	134061823	A5SS	0.2	50	50	ENSMUST00000238294.2	ENSMUSG00000030994.17	D7Ertd443e	chr7	protein_coding	DNA segment, Chr 7, ERATO Doi 443, expressed
chr7	133977771	133978446	-	133959815	133978446	A3SS	0.33	50	50	ENSMUST00000173195.8	ENSMUSG00000030994.17	D7Ertd443e	chr7	protein_coding	DNA segment, Chr 7, ERATO Doi 443, expressed
chr7	133959815	133967085	-	133959815	133978446	A5SS	0.2	50	50	ENSMUST00000173195.8	ENSMUSG00000030994.17	D7Ertd443e	chr7	protein_coding	DNA segment, Chr 7, ERATO Doi 443, expressed
chr7	133959815	133976766	-	133959815	133978446	A5SS	0.2	50	50	ENSMUST00000173195.8	ENSMUSG00000030994.17	D7Ertd443e	chr7	protein_coding	DNA segment, Chr 7, ERATO Doi 443, expressed
chr7	133959815	133967085	-	133959815	133976766	A5SS	0.25	50	50	ENSMUST00000173754.8	ENSMUSG00000030994.17	D7Ertd443e	chr7	protein_coding	DNA segment, Chr 7, ERATO Doi 443, expressed
chr7	134384576	134384731	+	134384576	134390880	A3SS	0.5	50	50	ENSMUST00000211570.2	ENSMUSG00000058325.7	Dock1	chr7	protein_coding	dedicator of cytokinesis 1
chr7	134272954	134326059	+	134272573	134326059	A5SS	0.5	50	50	ENSMUST00000211570.2	ENSMUSG00000058325.7	Dock1	chr7	protein_coding	dedicator of cytokinesis 1
chr7	134601047	134624946	+	134601047	134678864	A3SS	0.5	50	50	ENSMUST00000084488.5	ENSMUSG00000058325.7	Dock1	chr7	protein_coding	dedicator of cytokinesis 1
chr7	134520533	134539441	-	134500946	134539441	A3SS	0.5	50	50	ENSMUST00000210055.2	ENSMUSG00000073805.6	Insyn2a	chr7	protein_coding	inhibitory synaptic factor 2A
chr7	134500946	134519372	-	134500946	134539441	A5SS	0.5	50	50	ENSMUST00000210055.2	ENSMUSG00000073805.6	Insyn2a	chr7	protein_coding	inhibitory synaptic factor 2A
chr7	134500946	134539441	-	134500946;134520533	134519372;134539441	ES	0.5	50	50	ENSMUST00000171394.3	ENSMUSG00000073805.6	Insyn2a	chr7	protein_coding	inhibitory synaptic factor 2A
chr7	134795678	134797700	-	134795632	134797700	A3SS	0.5	50	50	ENSMUST00000190881.7	ENSMUSG00000100717.7	1700120G07Rik	chr7	lncRNA	RIKEN cDNA 1700120G07 gene
chr7	134870375	134870488	+	134869326	134870488	A5SS	0.5	50	50	ENSMUST00000210907.2	ENSMUSG00000073804.6	Nps	chr7	protein_coding	neuropeptide S
chr7	135139845	135245587	+	135139845;135203216	135203194;135245587	ES	0.33	50	50	ENSMUST00000211140.2	ENSMUSG00000041836.11	Ptpre	chr7	protein_coding	protein tyrosine phosphatase, receptor type, E
chr7	135271586;135271787	135271731;135272428	+	135271586	135272428	cassetteExon	0.5	100	100	ENSMUST00000211140.2	ENSMUSG00000041836.11	Ptpre	chr7	protein_coding	protein tyrosine phosphatase, receptor type, E
chr7	135195268	135203194	+	135139845	135203194	A5SS	0.5	50	50	ENSMUST00000211140.2	ENSMUSG00000041836.11	Ptpre	chr7	protein_coding	protein tyrosine phosphatase, receptor type, E
chr7	135207612	135245587	+	135203216	135245587	A5SS	0.33	50	50	ENSMUST00000211140.2	ENSMUSG00000041836.11	Ptpre	chr7	protein_coding	protein tyrosine phosphatase, receptor type, E
chr7	135253743	135253819	+	135253575	135253819	A5SS	0.5	50	50	ENSMUST00000211140.2	ENSMUSG00000041836.11	Ptpre	chr7	protein_coding	protein tyrosine phosphatase, receptor type, E
chr7	135207612	135245587	+	135139845	135245587	A5SS	0.33	50	50	ENSMUST00000209256.2	ENSMUSG00000041836.11	Ptpre	chr7	protein_coding	protein tyrosine phosphatase, receptor type, E
chr7	135250987	135252573	-	135248272	135252573	A3SS	0.5	50	50	ENSMUST00000180693.8	ENSMUSG00000097471.9	5830432E09Rik	chr7	lncRNA	RIKEN cDNA 5830432E09 gene
chr7	135309215	135310495	-	135310049	135310495	A3SS	0.5	50	50	ENSMUST00000033310.9	ENSMUSG00000031004.9	Mki67	chr7	protein_coding	antigen identified by monoclonal antibody Ki 67
chr7	135371533	135427437	+	135344573	135427437	A5SS	0.5	50	50	ENSMUST00000209956.2	ENSMUSG00000109831.2	Gm36431	chr7	lncRNA	predicted gene, 36431
chr7	135870205;135870676	135870643;135877803	+	135870205	135877803	cassetteExon	0.5	100	100	ENSMUST00000210438.2	ENSMUSG00000110027.2	C030029H02Rik	chr7	lncRNA	RIKEN cDNA C030029H02 gene
chr7	136800310	136800823	-	136800418	136800823	A3SS	0.5	50	50	ENSMUST00000169486.9	ENSMUSG00000010476.15	Ebf3	chr7	protein_coding	early B cell factor 3
chr7	136900621	136909214	-	136837717	136909214	A3SS	0.5	50	50	ENSMUST00000169486.9	ENSMUSG00000010476.15	Ebf3	chr7	protein_coding	early B cell factor 3
chr7	136827615	136832893	-	136827615	136832920	A5SS	0.5	50	50	ENSMUST00000169486.9	ENSMUSG00000010476.15	Ebf3	chr7	protein_coding	early B cell factor 3
chr7	136837717	136868994	-	136837717	136909214	A5SS	0.5	50	50	ENSMUST00000169486.9	ENSMUSG00000010476.15	Ebf3	chr7	protein_coding	early B cell factor 3
chr7	136915700	136915915	-	136915700	136915908	A5SS	0.5	50	50	ENSMUST00000106118.10	ENSMUSG00000010476.15	Ebf3	chr7	protein_coding	early B cell factor 3
chr7	136978080;136989430	136989100;137012369	-	136978080	137012369	cassetteExon	0.5	100	100	ENSMUST00000145881.8	ENSMUSG00000040139.15	9430038I01Rik	chr7	protein_coding	RIKEN cDNA 9430038I01 gene
chr7	136978080	136978684	-	136978080	137012369	A5SS	0.33	50	50	ENSMUST00000145881.8	ENSMUSG00000040139.15	9430038I01Rik	chr7	protein_coding	RIKEN cDNA 9430038I01 gene
chr7	136978080;136978846	136978684;136989100	-	136978080	136989100	cassetteExon	0.5	100	100	ENSMUST00000068996.13	ENSMUSG00000040139.15	9430038I01Rik	chr7	protein_coding	RIKEN cDNA 9430038I01 gene
chr7	136978080	137012369	-	136989430	137012369	3pMXE	0.5	50	50	ENSMUST00000135335.2	ENSMUSG00000040139.15	9430038I01Rik	chr7	protein_coding	RIKEN cDNA 9430038I01 gene
chr7	137046816;137054270	137054182;137054426	+	137046816	137054426	cassetteExon	0.5	100	100	ENSMUST00000064404.8	ENSMUSG00000031068.9	Glrx3	chr7	protein_coding	glutaredoxin 3
chr7	137039500	137043115	+	137039500	137046708	A3SS	0.5	50	50	ENSMUST00000064404.8	ENSMUSG00000031068.9	Glrx3	chr7	protein_coding	glutaredoxin 3
chr7	137054500	137055142	+	137054500	137061210	A3SS	0.5	50	50	ENSMUST00000209696.2	ENSMUSG00000031068.9	Glrx3	chr7	protein_coding	glutaredoxin 3
chr7	137061024	137061210	+	137054500	137061210	A5SS	0.5	50	50	ENSMUST00000209696.2	ENSMUSG00000031068.9	Glrx3	chr7	protein_coding	glutaredoxin 3
chr7	137861681	137872981	-	137861681	137878315	A5SS	0.5	50	50	ENSMUST00000160436.2	ENSMUSG00000091002.3	Tcerg1l	chr7	protein_coding	transcription elongation regulator 1-like
chr7	138157056	138158002	+	138157056	138168382	A3SS	0.5	50	50	ENSMUST00000209357.2	ENSMUSG00000110037.2	4930543N07Rik	chr7	lncRNA	RIKEN cDNA 4930543N07 gene
chr7	138156148	138156947	+	138156155	138156947	A5SS	0.5	50	50	ENSMUST00000209357.2	ENSMUSG00000110037.2	4930543N07Rik	chr7	lncRNA	RIKEN cDNA 4930543N07 gene
chr7	138165682	138168382	+	138157056	138168382	A5SS	0.5	50	50	ENSMUST00000209357.2	ENSMUSG00000110037.2	4930543N07Rik	chr7	lncRNA	RIKEN cDNA 4930543N07 gene
chr7	138438759	138447686	-	138438759;138442663	138442306;138447686	ES	0.33	50	50	ENSMUST00000119664.2	ENSMUSG00000041775.8	Mapk1ip1	chr7	protein_coding	mitogen-activated protein kinase 1 interacting protein 1
chr7	138438655	138447686	-	138442663	138447686	A3SS&ES	0.33	50	50	ENSMUST00000119664.2	ENSMUSG00000041775.8	Mapk1ip1	chr7	protein_coding	mitogen-activated protein kinase 1 interacting protein 1
chr7	138438655	138447686	-	138438759	138447686	A3SS	0.33	50	50	ENSMUST00000075667.5	ENSMUSG00000041775.8	Mapk1ip1	chr7	protein_coding	mitogen-activated protein kinase 1 interacting protein 1
chr7	138448433;138450394	138450188;138470139	+	138448433	138470139	cassetteExon	0.5	100	100	ENSMUST00000128157.2	ENSMUSG00000041769.14	Ppp2r2d	chr7	protein_coding	protein phosphatase 2, regulatory subunit B, delta
chr7	138448433;138466846	138466750;138470139	+	138448433	138470139	cassetteExon	0.5	100	100	ENSMUST00000128157.2	ENSMUSG00000041769.14	Ppp2r2d	chr7	protein_coding	protein phosphatase 2, regulatory subunit B, delta
chr7	138448812	138470139	+	138448433	138470139	A5SS	0.2	50	50	ENSMUST00000128157.2	ENSMUSG00000041769.14	Ppp2r2d	chr7	protein_coding	protein phosphatase 2, regulatory subunit B, delta
chr7	138462638	138470139	+	138448433	138470139	A5SS	0.2	50	50	ENSMUST00000128157.2	ENSMUSG00000041769.14	Ppp2r2d	chr7	protein_coding	protein phosphatase 2, regulatory subunit B, delta
chr7	138470236	138472119	+	138470236;138471584	138471419;138472119	ES	0.5	50	50	ENSMUST00000041097.13	ENSMUSG00000041769.14	Ppp2r2d	chr7	protein_coding	protein phosphatase 2, regulatory subunit B, delta
chr7	138472231	138474730	+	138472231	138474603	A3SS	0.5	50	50	ENSMUST00000041097.13	ENSMUSG00000041769.14	Ppp2r2d	chr7	protein_coding	protein phosphatase 2, regulatory subunit B, delta
chr7	138470236	138472119	+	138470236	138471419	3pMXE	0.5	50	50	ENSMUST00000148453.8	ENSMUSG00000041769.14	Ppp2r2d	chr7	protein_coding	protein phosphatase 2, regulatory subunit B, delta
chr7	138448433;138466846	138466750;138470139	+	138448433;138450394	138450188;138470139	MXE	0.5	100	100	ENSMUST00000148453.8	ENSMUSG00000041769.14	Ppp2r2d	chr7	protein_coding	protein phosphatase 2, regulatory subunit B, delta
chr7	138448812	138470139	+	138450394	138470139	A5SS&ES	0.2	50	50	ENSMUST00000148453.8	ENSMUSG00000041769.14	Ppp2r2d	chr7	protein_coding	protein phosphatase 2, regulatory subunit B, delta
chr7	138462638	138470139	+	138450394	138470139	A5SS	0.2	50	50	ENSMUST00000148453.8	ENSMUSG00000041769.14	Ppp2r2d	chr7	protein_coding	protein phosphatase 2, regulatory subunit B, delta
chr7	138448812	138470139	+	138466846	138470139	A5SS&ES	0.2	50	50	ENSMUST00000152104.8	ENSMUSG00000041769.14	Ppp2r2d	chr7	protein_coding	protein phosphatase 2, regulatory subunit B, delta
chr7	138462638	138470139	+	138466846	138470139	A5SS&ES	0.2	50	50	ENSMUST00000152104.8	ENSMUSG00000041769.14	Ppp2r2d	chr7	protein_coding	protein phosphatase 2, regulatory subunit B, delta
chr7	138462638	138470139	+	138448812	138470139	A5SS	0.2	50	50	ENSMUST00000140047.8	ENSMUSG00000041769.14	Ppp2r2d	chr7	protein_coding	protein phosphatase 2, regulatory subunit B, delta
chr7	138500557	138511035	-	138500557	138511092	A5SS	0.5	50	50	ENSMUST00000106112.2	ENSMUSG00000078566.9	Bnip3	chr7	protein_coding	BCL2/adenovirus E1B interacting protein 3
chr7	138609530;138619468	138619253;138620836	+	138609530	138620836	cassetteExon	0.5	100	100	ENSMUST00000106111.9	ENSMUSG00000056856.15	Jakmip3	chr7	protein_coding	janus kinase and microtubule interacting protein 3
chr7	138609530	138620842	+	138609530	138620836	A3SS	0.33	50	50	ENSMUST00000106111.9	ENSMUSG00000056856.15	Jakmip3	chr7	protein_coding	janus kinase and microtubule interacting protein 3
chr7	138657613	138661595	+	138646174	138661595	A5SS	0.5	50	50	ENSMUST00000106111.9	ENSMUSG00000056856.15	Jakmip3	chr7	protein_coding	janus kinase and microtubule interacting protein 3
chr7	138609530	138620842	+	138609530	138619253	A3SS&ES	0.33	50	50	ENSMUST00000166163.4	ENSMUSG00000056856.15	Jakmip3	chr7	protein_coding	janus kinase and microtubule interacting protein 3
chr7	138668314	138669426	+	138666077	138669426	A5SS	0.5	50	50	ENSMUST00000026551.15	ENSMUSG00000025478.16	Dpysl4	chr7	protein_coding	dihydropyrimidinase-like 4
chr7	138666077	138669426	+	138666077	138671778	A3SS	0.5	50	50	ENSMUST00000139364.8	ENSMUSG00000025478.16	Dpysl4	chr7	protein_coding	dihydropyrimidinase-like 4
chr7	138670259	138671778	+	138666077	138671778	A5SS	0.5	50	50	ENSMUST00000139364.8	ENSMUSG00000025478.16	Dpysl4	chr7	protein_coding	dihydropyrimidinase-like 4
chr7	138721046	138793128	-	138721046	138768015	5pMXE	0.5	50	50	ENSMUST00000016125.12	ENSMUSG00000015981.13	Stk32c	chr7	protein_coding	serine/threonine kinase 32C
chr7	138794875;138796806	138796665;138798144	+	138794875	138798144	cassetteExon	0.5	100	100	ENSMUST00000016124.15	ENSMUSG00000015980.15	Lrrc27	chr7	protein_coding	leucine rich repeat containing 27
chr7	138818615;138820269	138820187;138822536	+	138818615	138822536	cassetteExon	0.5	100	100	ENSMUST00000016124.15	ENSMUSG00000015980.15	Lrrc27	chr7	protein_coding	leucine rich repeat containing 27
chr7	138806277	138807883	+	138806277	138807836	A3SS	0.5	50	50	ENSMUST00000016124.15	ENSMUSG00000015980.15	Lrrc27	chr7	protein_coding	leucine rich repeat containing 27
chr7	138807982	138808560	+	138807982	138810119	A3SS	0.5	50	50	ENSMUST00000016124.15	ENSMUSG00000015980.15	Lrrc27	chr7	protein_coding	leucine rich repeat containing 27
chr7	138793090	138794591	+	138793183	138794591	A5SS	0.33	50	50	ENSMUST00000016124.15	ENSMUSG00000015980.15	Lrrc27	chr7	protein_coding	leucine rich repeat containing 27
chr7	138794321	138794591	+	138793183	138794591	A5SS	0.33	50	50	ENSMUST00000016124.15	ENSMUSG00000015980.15	Lrrc27	chr7	protein_coding	leucine rich repeat containing 27
chr7	138800554	138801310	+	138798274	138801310	A5SS	0.5	50	50	ENSMUST00000016124.15	ENSMUSG00000015980.15	Lrrc27	chr7	protein_coding	leucine rich repeat containing 27
chr7	138814007	138816786	+	138810212	138816786	A5SS	0.33	50	50	ENSMUST00000016124.15	ENSMUSG00000015980.15	Lrrc27	chr7	protein_coding	leucine rich repeat containing 27
chr7	138815831	138816786	+	138810212	138816786	A5SS	0.33	50	50	ENSMUST00000016124.15	ENSMUSG00000015980.15	Lrrc27	chr7	protein_coding	leucine rich repeat containing 27
chr7	138794321	138794591	+	138793090	138794591	A5SS	0.33	50	50	ENSMUST00000156768.8	ENSMUSG00000015980.15	Lrrc27	chr7	protein_coding	leucine rich repeat containing 27
chr7	138815831	138816786	+	138814007	138816786	A5SS	0.33	50	50	ENSMUST00000126213.8	ENSMUSG00000015980.15	Lrrc27	chr7	protein_coding	leucine rich repeat containing 27
chr7	138836381	138846388	+	138836076	138846388	A5SS	0.5	50	50	ENSMUST00000093993.5	ENSMUSG00000060260.14	Pwwp2b	chr7	protein_coding	PWWP domain containing 2B
chr7	139061635	139077620	+	139061635	139091324	A3SS	0.5	50	50	ENSMUST00000106098.8	ENSMUSG00000025477.15	Inpp5a	chr7	protein_coding	inositol polyphosphate-5-phosphatase A
chr7	138980662	139033970	+	138969380	139033970	A5SS	0.5	50	50	ENSMUST00000106098.8	ENSMUSG00000025477.15	Inpp5a	chr7	protein_coding	inositol polyphosphate-5-phosphatase A
chr7	139058043	139061548	+	139058011	139061548	A5SS	0.5	50	50	ENSMUST00000106098.8	ENSMUSG00000025477.15	Inpp5a	chr7	protein_coding	inositol polyphosphate-5-phosphatase A
chr7	139158134	139158270	+	139158185	139158270	A5SS	0.5	50	50	ENSMUST00000106098.8	ENSMUSG00000025477.15	Inpp5a	chr7	protein_coding	inositol polyphosphate-5-phosphatase A
chr7	139183440	139183792	-	139183440	139183743	A5SS	0.5	50	50	ENSMUST00000196540.5	ENSMUSG00000049571.19	Cfap46	chr7	protein_coding	cilia and flagella associated protein 46
chr7	139192045	139194323	-	139192045;139193504	139193425;139194323	ES	0.5	50	50	ENSMUST00000129990.9	ENSMUSG00000049571.19	Cfap46	chr7	protein_coding	cilia and flagella associated protein 46
chr7	139255982	139259241	-	139255982;139258516	139258406;139259241	ES	0.5	50	50	ENSMUST00000129990.9	ENSMUSG00000049571.19	Cfap46	chr7	protein_coding	cilia and flagella associated protein 46
chr7	139263051	139263638	-	139263051;139263386	139263262;139263638	ES	0.5	50	50	ENSMUST00000129990.9	ENSMUSG00000049571.19	Cfap46	chr7	protein_coding	cilia and flagella associated protein 46
chr7	139234612;139234970	139234859;139235722	-	139234612	139235722	cassetteExon	0.5	100	100	ENSMUST00000129990.9	ENSMUSG00000049571.19	Cfap46	chr7	protein_coding	cilia and flagella associated protein 46
chr7	139232736	139233255	-	139232736	139233311	A5SS	0.5	50	50	ENSMUST00000129990.9	ENSMUSG00000049571.19	Cfap46	chr7	protein_coding	cilia and flagella associated protein 46
chr7	139262461	139262923	-	139262461	139262920	A5SS	0.5	50	50	ENSMUST00000129990.9	ENSMUSG00000049571.19	Cfap46	chr7	protein_coding	cilia and flagella associated protein 46
chr7	139255982	139259241	-	139258516	139259241	3pMXE	0.5	50	50	ENSMUST00000138129.2	ENSMUSG00000049571.19	Cfap46	chr7	protein_coding	cilia and flagella associated protein 46
chr7	139415313	139425501	+	139415313;139420733	139420144;139425501	ES	0.5	50	50	ENSMUST00000026548.14	ENSMUSG00000025475.18	Adgra1	chr7	protein_coding	adhesion G protein-coupled receptor A1
chr7	139415313	139420144	+	139415313	139425501	A3SS	0.5	50	50	ENSMUST00000137584.2	ENSMUSG00000025475.18	Adgra1	chr7	protein_coding	adhesion G protein-coupled receptor A1
chr7	139420733	139425501	+	139415313	139425501	A5SS	0.5	50	50	ENSMUST00000137584.2	ENSMUSG00000025475.18	Adgra1	chr7	protein_coding	adhesion G protein-coupled receptor A1
chr7	139542799	139547672	+	139542799	139542935	3pMXE	0.33	50	50	ENSMUST00000134312.9	ENSMUSG00000086742.9	Gm16201	chr7	lncRNA	predicted gene 16201
chr7	139542799	139555218	+	139542799	139542935	3pMXE	0.33	50	50	ENSMUST00000134312.9	ENSMUSG00000086742.9	Gm16201	chr7	lncRNA	predicted gene 16201
chr7	139530390	139530651	+	139530390	139542713	A3SS	0.5	50	50	ENSMUST00000139218.2	ENSMUSG00000086742.9	Gm16201	chr7	lncRNA	predicted gene 16201
chr7	139542799	139547672	+	139542799	139555218	A3SS	0.33	50	50	ENSMUST00000139218.2	ENSMUSG00000086742.9	Gm16201	chr7	lncRNA	predicted gene 16201
chr7	139531865	139542713	+	139530390	139542713	A5SS	0.5	50	50	ENSMUST00000139218.2	ENSMUSG00000086742.9	Gm16201	chr7	lncRNA	predicted gene 16201
chr7	139552520	139555891	-	139552520	139555775	A5SS&ES	0.5	50	50	ENSMUST00000146974.2	ENSMUSG00000073795.12	Spef1l	chr7	protein_coding	sperm flagellar 1 like
chr7	139555871	139555954	-	139555871	139556392	A5SS	0.25	50	50	ENSMUST00000146974.2	ENSMUSG00000073795.12	Spef1l	chr7	protein_coding	sperm flagellar 1 like
chr7	139555871	139555967	-	139555871	139556392	A5SS	0.25	50	50	ENSMUST00000146974.2	ENSMUSG00000073795.12	Spef1l	chr7	protein_coding	sperm flagellar 1 like
chr7	139555871	139556388	-	139555871	139556392	A5SS	0.25	50	50	ENSMUST00000146974.2	ENSMUSG00000073795.12	Spef1l	chr7	protein_coding	sperm flagellar 1 like
chr7	139555871	139556388	-	139555871;139556041	139555954;139556388	ES	0.5	50	50	ENSMUST00000097970.9	ENSMUSG00000073795.12	Spef1l	chr7	protein_coding	sperm flagellar 1 like
chr7	139555871	139555967	-	139555871	139555954	A5SS	0.25	50	50	ENSMUST00000097970.9	ENSMUSG00000073795.12	Spef1l	chr7	protein_coding	sperm flagellar 1 like
chr7	139552520;139556041	139555891;139556388	-	139552520;139555871	139555775;139556388	MXE	0.5	100	100	ENSMUST00000209335.2	ENSMUSG00000073795.12	Spef1l	chr7	protein_coding	sperm flagellar 1 like
chr7	139555871;139556041	139555967;139556388	-	139555871	139556388	cassetteExon	0.5	100	100	ENSMUST00000209335.2	ENSMUSG00000073795.12	Spef1l	chr7	protein_coding	sperm flagellar 1 like
chr7	139566399	139566646	-	139566381	139566646	A3SS	0.5	50	50	ENSMUST00000156647.8	ENSMUSG00000025473.17	Adam8	chr7	protein_coding	a disintegrin and metallopeptidase domain 8
chr7	139570042	139571259	-	139570042;139570261	139570185;139571259	ES	0.5	50	50	ENSMUST00000026546.16	ENSMUSG00000025473.17	Adam8	chr7	protein_coding	a disintegrin and metallopeptidase domain 8
chr7	139571362	139572345	-	139571359	139572345	A3SS	0.5	50	50	ENSMUST00000026546.16	ENSMUSG00000025473.17	Adam8	chr7	protein_coding	a disintegrin and metallopeptidase domain 8
chr7	139568208	139568292	-	139568208	139568376	A5SS	0.5	50	50	ENSMUST00000026546.16	ENSMUSG00000025473.17	Adam8	chr7	protein_coding	a disintegrin and metallopeptidase domain 8
chr7	139613711	139616260	-	139613711	139616009	5pMXE	0.33	50	50	ENSMUST00000210224.2	ENSMUSG00000025474.10	Tubgcp2	chr7	protein_coding	tubulin, gamma complex associated protein 2
chr7	139588007;139609899	139609740;139610924	-	139588007	139610924	cassetteExon	0.5	100	100	ENSMUST00000210224.2	ENSMUSG00000025474.10	Tubgcp2	chr7	protein_coding	tubulin, gamma complex associated protein 2
chr7	139612219	139613526	-	139612160	139613526	A3SS	0.5	50	50	ENSMUST00000210224.2	ENSMUSG00000025474.10	Tubgcp2	chr7	protein_coding	tubulin, gamma complex associated protein 2
chr7	139613711	139616083	-	139613711	139616009	A5SS	0.33	50	50	ENSMUST00000210224.2	ENSMUSG00000025474.10	Tubgcp2	chr7	protein_coding	tubulin, gamma complex associated protein 2
chr7	139613711	139616083	-	139613711	139616260	A5SS	0.33	50	50	ENSMUST00000211638.2	ENSMUSG00000025474.10	Tubgcp2	chr7	protein_coding	tubulin, gamma complex associated protein 2
chr7	139588007	139610924	-	139609899	139610924	3pMXE	0.5	50	50	ENSMUST00000211261.2	ENSMUSG00000025474.10	Tubgcp2	chr7	protein_coding	tubulin, gamma complex associated protein 2
chr7	139616806;139617334	139617031;139617429	+	139616806	139617429	cassetteExon	0.5	100	100	ENSMUST00000211789.2	ENSMUSG00000025470.12	Zfp511	chr7	protein_coding	zinc finger protein 511
chr7	139616806;139617334	139617133;139617429	+	139616806	139617429	cassetteExon	0.5	100	100	ENSMUST00000211789.2	ENSMUSG00000025470.12	Zfp511	chr7	protein_coding	zinc finger protein 511
chr7	139616806	139617031	+	139616806	139617133	A3SS	0.33	50	50	ENSMUST00000168194.3	ENSMUSG00000025470.12	Zfp511	chr7	protein_coding	zinc finger protein 511
chr7	139616806	139617429	+	139616806	139617031	A3SS	0.33	50	50	ENSMUST00000210936.2	ENSMUSG00000025470.12	Zfp511	chr7	protein_coding	zinc finger protein 511
chr7	139628053	139628699	-	139628053	139628631	A5SS	0.5	50	50	ENSMUST00000055353.9	ENSMUSG00000025469.11	Msx3	chr7	protein_coding	msh homeobox 3
chr7	139654013	139661294	-	139654013	139662375	A5SS	0.33	50	50	ENSMUST00000026541.15	ENSMUSG00000025468.16	Caly	chr7	protein_coding	calcyon neuron-specific vesicular protein
chr7	139654013	139662006	-	139654013	139662375	A5SS	0.33	50	50	ENSMUST00000026541.15	ENSMUSG00000025468.16	Caly	chr7	protein_coding	calcyon neuron-specific vesicular protein
chr7	139654013;139661451	139661294;139662006	-	139654013	139662006	cassetteExon	0.5	100	100	ENSMUST00000211044.2	ENSMUSG00000025468.16	Caly	chr7	protein_coding	calcyon neuron-specific vesicular protein
chr7	139681101	139681514	-	139681101;139681315	139681245;139681514	ES	0.33	50	50	ENSMUST00000120034.8	ENSMUSG00000025466.20	Fuom	chr7	protein_coding	fucose mutarotase
chr7	139679528	139681514	-	139681315	139681514	A3SS&ES	0.33	50	50	ENSMUST00000120034.8	ENSMUSG00000025466.20	Fuom	chr7	protein_coding	fucose mutarotase
chr7	139679535	139679792	-	139676952	139679792	A3SS	0.33	50	50	ENSMUST00000120034.8	ENSMUSG00000025466.20	Fuom	chr7	protein_coding	fucose mutarotase
chr7	139679619	139679792	-	139676952	139679792	A3SS	0.33	50	50	ENSMUST00000120034.8	ENSMUSG00000025466.20	Fuom	chr7	protein_coding	fucose mutarotase
chr7	139680073	139681003	-	139679865	139681003	A3SS	0.5	50	50	ENSMUST00000120034.8	ENSMUSG00000025466.20	Fuom	chr7	protein_coding	fucose mutarotase
chr7	139681582	139681708	-	139681582	139682220	A5SS	0.33	50	50	ENSMUST00000120034.8	ENSMUSG00000025466.20	Fuom	chr7	protein_coding	fucose mutarotase
chr7	139681582	139681994	-	139681582	139682220	A5SS	0.33	50	50	ENSMUST00000120034.8	ENSMUSG00000025466.20	Fuom	chr7	protein_coding	fucose mutarotase
chr7	139679619	139679792	-	139679619	139679716	A5SS	0.5	50	50	ENSMUST00000148716.8	ENSMUSG00000025466.20	Fuom	chr7	protein_coding	fucose mutarotase
chr7	139679619	139679792	-	139679535	139679792	A3SS	0.33	50	50	ENSMUST00000142105.8	ENSMUSG00000025466.20	Fuom	chr7	protein_coding	fucose mutarotase
chr7	139681101	139681514	-	139679528	139681514	A3SS	0.33	50	50	ENSMUST00000143197.8	ENSMUSG00000025466.20	Fuom	chr7	protein_coding	fucose mutarotase
chr7	139681582	139681708	-	139681582	139681994	A5SS	0.33	50	50	ENSMUST00000143197.8	ENSMUSG00000025466.20	Fuom	chr7	protein_coding	fucose mutarotase
chr7	139681101	139681514	-	139681315	139681514	A3SS	0.33	50	50	ENSMUST00000155777.8	ENSMUSG00000025466.20	Fuom	chr7	protein_coding	fucose mutarotase
chr7	139692459	139696220	-	139692459;139693046	139692849;139696220	ES	0.5	50	50	ENSMUST00000026538.13	ENSMUSG00000025465.14	Echs1	chr7	protein_coding	enoyl Coenzyme A hydratase, short chain, 1, mitochondrial
chr7	139692459	139696220	-	139693046	139696220	A3SS	0.5	50	50	ENSMUST00000155647.2	ENSMUSG00000025465.14	Echs1	chr7	protein_coding	enoyl Coenzyme A hydratase, short chain, 1, mitochondrial
chr7	139697269	139708931	+	139697269;139707620	139707421;139708931	ES	0.33	50	50	ENSMUST00000211757.2	ENSMUSG00000025464.16	Paox	chr7	protein_coding	polyamine oxidase (exo-N4-amino)
chr7	139697269;139706728	139706239;139707421	+	139697269	139707421	cassetteExon	0.5	100	100	ENSMUST00000211757.2	ENSMUSG00000025464.16	Paox	chr7	protein_coding	polyamine oxidase (exo-N4-amino)
chr7	139705795	139708931	+	139707620	139708931	A5SS&ES	0.33	50	50	ENSMUST00000211757.2	ENSMUSG00000025464.16	Paox	chr7	protein_coding	polyamine oxidase (exo-N4-amino)
chr7	139697269	139706239	+	139697269	139708931	A3SS	0.33	50	50	ENSMUST00000209908.2	ENSMUSG00000025464.16	Paox	chr7	protein_coding	polyamine oxidase (exo-N4-amino)
chr7	139705795	139708931	+	139697269	139708931	A5SS	0.33	50	50	ENSMUST00000209908.2	ENSMUSG00000025464.16	Paox	chr7	protein_coding	polyamine oxidase (exo-N4-amino)
chr7	139697269	139707421	+	139697269	139706239	3pMXE	0.33	50	50	ENSMUST00000210240.2	ENSMUSG00000025464.16	Paox	chr7	protein_coding	polyamine oxidase (exo-N4-amino)
chr7	139705795	139706239	+	139697269	139706239	A5SS	0.5	50	50	ENSMUST00000210240.2	ENSMUSG00000025464.16	Paox	chr7	protein_coding	polyamine oxidase (exo-N4-amino)
chr7	139705795	139706239	+	139705795	139708931	A3SS	0.5	50	50	ENSMUST00000097967.4	ENSMUSG00000025464.16	Paox	chr7	protein_coding	polyamine oxidase (exo-N4-amino)
chr7	139717966	139718232	+	139717686	139718232	A5SS	0.5	50	50	ENSMUST00000036977.9	ENSMUSG00000039018.16	Mtg1	chr7	protein_coding	mitochondrial ribosome-associated GTPase 1
chr7	139728960	139729661	+	139727247	139729661	A5SS	0.5	50	50	ENSMUST00000036977.9	ENSMUSG00000039018.16	Mtg1	chr7	protein_coding	mitochondrial ribosome-associated GTPase 1
chr7	139717686	139718232	+	139717686	139723651	A3SS	0.5	50	50	ENSMUST00000211171.2	ENSMUSG00000039018.16	Mtg1	chr7	protein_coding	mitochondrial ribosome-associated GTPase 1
chr7	139720213	139723651	+	139717686	139723651	A5SS	0.5	50	50	ENSMUST00000211171.2	ENSMUSG00000039018.16	Mtg1	chr7	protein_coding	mitochondrial ribosome-associated GTPase 1
chr7	139754161;139754700	139754573;139755521	+	139754161	139755521	cassetteExon	0.5	100	100	ENSMUST00000209314.3	ENSMUSG00000051051.8	Olfr523	chr7	protein_coding	olfactory receptor 523
chr7	139754161	139755746	+	139754161	139755521	A3SS	0.33	50	50	ENSMUST00000209314.3	ENSMUSG00000051051.8	Olfr523	chr7	protein_coding	olfactory receptor 523
chr7	139753417	139753931	+	139753424	139753931	A5SS	0.5	50	50	ENSMUST00000209314.3	ENSMUSG00000051051.8	Olfr523	chr7	protein_coding	olfactory receptor 523
chr7	139754161	139754573	+	139754161	139755746	A3SS	0.33	50	50	ENSMUST00000213953.2	ENSMUSG00000051051.8	Olfr523	chr7	protein_coding	olfactory receptor 523
chr7	139808731	139809658	+	139808731;139808971	139808895;139809658	ES	0.5	50	50	ENSMUST00000211540.2	ENSMUSG00000025461.12	Scart1	chr7	protein_coding	scavenger receptor family member expressed on T cells 1
chr7	139808731	139808948	+	139808731	139808895	A3SS	0.25	50	50	ENSMUST00000211540.2	ENSMUSG00000025461.12	Scart1	chr7	protein_coding	scavenger receptor family member expressed on T cells 1
chr7	139808731	139809628	+	139808731	139808895	A3SS&ES	0.25	50	50	ENSMUST00000211540.2	ENSMUSG00000025461.12	Scart1	chr7	protein_coding	scavenger receptor family member expressed on T cells 1
chr7	139808731	139809658	+	139808731;139808971	139808948;139809658	ES	0.5	50	50	ENSMUST00000084460.7	ENSMUSG00000025461.12	Scart1	chr7	protein_coding	scavenger receptor family member expressed on T cells 1
chr7	139808731	139809628	+	139808731	139808948	A3SS&ES	0.25	50	50	ENSMUST00000084460.7	ENSMUSG00000025461.12	Scart1	chr7	protein_coding	scavenger receptor family member expressed on T cells 1
chr7	139808731	139809658	+	139808731	139809628	A3SS	0.25	50	50	ENSMUST00000209398.2	ENSMUSG00000025461.12	Scart1	chr7	protein_coding	scavenger receptor family member expressed on T cells 1
chr7	139829042	139874572	+	139829042;139833601	139833522;139874572	ES	0.33	50	50	ENSMUST00000210212.2	ENSMUSG00000054672.14	Scart2	chr7	protein_coding	scavenger receptor family member expressed on T cells 2
chr7	139829042	139841398	+	139829042	139833522	A3SS&ES	0.33	50	50	ENSMUST00000210212.2	ENSMUSG00000054672.14	Scart2	chr7	protein_coding	scavenger receptor family member expressed on T cells 2
chr7	139854046	139874572	+	139833601	139874572	A5SS	0.33	50	50	ENSMUST00000210212.2	ENSMUSG00000054672.14	Scart2	chr7	protein_coding	scavenger receptor family member expressed on T cells 2
chr7	139829042	139841398	+	139829042	139874572	A3SS	0.33	50	50	ENSMUST00000059882.13	ENSMUSG00000054672.14	Scart2	chr7	protein_coding	scavenger receptor family member expressed on T cells 2
chr7	139854046	139874572	+	139829042	139874572	A5SS	0.33	50	50	ENSMUST00000059882.13	ENSMUSG00000054672.14	Scart2	chr7	protein_coding	scavenger receptor family member expressed on T cells 2
chr7	139829042;139833601	139833522;139874572	+	139829042;139854046	139841398;139874572	MXE	0.5	100	100	ENSMUST00000164583.8	ENSMUSG00000054672.14	Scart2	chr7	protein_coding	scavenger receptor family member expressed on T cells 2
chr7	139900853	139902485	+	139900853	139902939	A3SS	0.5	50	50	ENSMUST00000215542.2	ENSMUSG00000061489.4	Olfr525	chr7	protein_coding	olfactory receptor 525
chr7	139915325	139915426	+	139914252	139915426	A5SS	0.5	50	50	ENSMUST00000214858.2	ENSMUSG00000062782.5	Olfr527	chr7	protein_coding	olfactory receptor 527
chr7	139927139	139941457	-	139927139;139927825	139927763;139941457	ES	0.33	50	50	ENSMUST00000215023.2	ENSMUSG00000060112.5	Olfr60	chr7	protein_coding	olfactory receptor 60
chr7	139926010	139926901	-	139926007	139926901	A3SS	0.5	50	50	ENSMUST00000215023.2	ENSMUSG00000060112.5	Olfr60	chr7	protein_coding	olfactory receptor 60
chr7	139926010	139941457	-	139927825	139941457	A3SS&ES	0.33	50	50	ENSMUST00000215023.2	ENSMUSG00000060112.5	Olfr60	chr7	protein_coding	olfactory receptor 60
chr7	139926010	139941457	-	139926010;139927139	139926901;139941457	ES	0.33	50	50	ENSMUST00000211031.3	ENSMUSG00000060112.5	Olfr60	chr7	protein_coding	olfactory receptor 60
chr7	139926010	139941457	-	139926010;139927825	139926901;139941457	ES	0.33	50	50	ENSMUST00000216027.2	ENSMUSG00000060112.5	Olfr60	chr7	protein_coding	olfactory receptor 60
chr7	139927139	139941457	-	139927825	139941457	A3SS	0.33	50	50	ENSMUST00000216027.2	ENSMUSG00000060112.5	Olfr60	chr7	protein_coding	olfactory receptor 60
chr7	139980877	139982566	-	139981011	139982566	A3SS	0.33	50	50	ENSMUST00000080153.4	ENSMUSG00000062712.4	Olfr531	chr7	protein_coding	olfactory receptor 531
chr7	139981021	139982566	-	139981011	139982566	A3SS	0.33	50	50	ENSMUST00000080153.4	ENSMUSG00000062712.4	Olfr531	chr7	protein_coding	olfactory receptor 531
chr7	139981021	139982566	-	139980877	139982566	A3SS	0.33	50	50	ENSMUST00000217032.2	ENSMUSG00000062712.4	Olfr531	chr7	protein_coding	olfactory receptor 531
chr7	139999800	140001499	-	139999359	140001499	A3SS	0.5	50	50	ENSMUST00000213172.2	ENSMUSG00000063823.3	Olfr532	chr7	protein_coding	olfactory receptor 532
chr7	140043332	140043863	+	140043332	140043831	A3SS	0.5	50	50	ENSMUST00000211093.3	ENSMUSG00000056883.6	Olfr533	chr7	protein_coding	olfactory receptor 533
chr7	140045500	140046720	+	140045500	140045983	A3SS	0.5	50	50	ENSMUST00000211093.3	ENSMUSG00000056883.6	Olfr533	chr7	protein_coding	olfactory receptor 533
chr7	140064454;140065271	140065178;140066841	+	140064454	140066841	cassetteExon	0.5	100	100	ENSMUST00000214296.2	ENSMUSG00000063230.6	Olfr535	chr7	protein_coding	olfactory receptor 535
chr7	140069270	140072452	+	140069270	140072383	A3SS	0.25	50	50	ENSMUST00000214296.2	ENSMUSG00000063230.6	Olfr535	chr7	protein_coding	olfactory receptor 535
chr7	140069270	140072517	+	140069270	140072383	A3SS	0.25	50	50	ENSMUST00000214296.2	ENSMUSG00000063230.6	Olfr535	chr7	protein_coding	olfactory receptor 535
chr7	140069270	140072668	+	140069270	140072383	A3SS	0.25	50	50	ENSMUST00000214296.2	ENSMUSG00000063230.6	Olfr535	chr7	protein_coding	olfactory receptor 535
chr7	140069270	140072452	+	140069270	140072668	A3SS	0.25	50	50	ENSMUST00000216962.2	ENSMUSG00000063230.6	Olfr535	chr7	protein_coding	olfactory receptor 535
chr7	140069270	140072517	+	140069270	140072668	A3SS	0.25	50	50	ENSMUST00000216962.2	ENSMUSG00000063230.6	Olfr535	chr7	protein_coding	olfactory receptor 535
chr7	140069270	140072517	+	140069270	140072452	A3SS	0.25	50	50	ENSMUST00000213715.3	ENSMUSG00000063230.6	Olfr535	chr7	protein_coding	olfactory receptor 535
chr7	140084461	140086151	-	140084461;140085798	140085608;140086151	ES	0.33	50	50	ENSMUST00000215768.2	ENSMUSG00000052508.11	Olfr536	chr7	protein_coding	olfactory receptor 536
chr7	140086220;140086761	140086712;140087195	-	140086220;140087010	140086856;140087195	MXE	0.5	100	100	ENSMUST00000215768.2	ENSMUSG00000052508.11	Olfr536	chr7	protein_coding	olfactory receptor 536
chr7	140084464	140086151	-	140085798	140086151	A3SS&ES	0.33	50	50	ENSMUST00000215768.2	ENSMUSG00000052508.11	Olfr536	chr7	protein_coding	olfactory receptor 536
chr7	140084461	140086151	-	140084464	140086151	A3SS	0.33	50	50	ENSMUST00000215340.2	ENSMUSG00000052508.11	Olfr536	chr7	protein_coding	olfactory receptor 536
chr7	140109566;140113827	140113774;140118322	+	140109566	140118322	cassetteExon	0.5	100	100	ENSMUST00000209871.3	ENSMUSG00000110092.3	Olfr537-ps1	chr7	polymorphic_pseudogene	olfactory receptor 537, pseudogene 1
chr7	140185550	140190001	+	140185550	140190066	A3SS	0.5	50	50	ENSMUST00000214180.2	ENSMUSG00000093942.4	Olfr46	chr7	protein_coding	olfactory receptor 46
chr7	140209038	140217510	+	140209038	140217774	A3SS	0.33	50	50	ENSMUST00000210373.2	ENSMUSG00000096069.5	Olfr61	chr7	protein_coding	olfactory receptor 61
chr7	140209038	140217513	+	140209038	140217774	A3SS	0.33	50	50	ENSMUST00000210373.2	ENSMUSG00000096069.5	Olfr61	chr7	protein_coding	olfactory receptor 61
chr7	140209038	140217510	+	140209038	140217513	A3SS	0.33	50	50	ENSMUST00000210241.4	ENSMUSG00000096069.5	Olfr61	chr7	protein_coding	olfactory receptor 61
chr7	140226501;140229792	140229737;140231808	+	140226501	140231808	cassetteExon	0.5	100	100	ENSMUST00000084456.6	ENSMUSG00000094819.4	Olfr53	chr7	protein_coding	olfactory receptor 53
chr7	140226501	140231812	+	140226501	140231808	A3SS	0.33	50	50	ENSMUST00000084456.6	ENSMUSG00000094819.4	Olfr53	chr7	protein_coding	olfactory receptor 53
chr7	140226501	140229737	+	140226501	140231812	A3SS	0.33	50	50	ENSMUST00000211057.2	ENSMUSG00000094819.4	Olfr53	chr7	protein_coding	olfactory receptor 53
chr7	140239920	140250617	+	140239920;140245728	140245628;140250617	ES	0.5	50	50	ENSMUST00000219579.2	ENSMUSG00000059136.5	Olfr539	chr7	protein_coding	olfactory receptor 539
chr7	140245728	140247187	+	140245728	140250617	A3SS	0.5	50	50	ENSMUST00000219579.2	ENSMUSG00000059136.5	Olfr539	chr7	protein_coding	olfactory receptor 539
chr7	140239920	140250617	+	140239920	140245628	A3SS&ES	0.5	50	50	ENSMUST00000218865.2	ENSMUSG00000059136.5	Olfr539	chr7	protein_coding	olfactory receptor 539
chr7	140277383	140284130	+	140277383	140284082	A3SS	0.5	50	50	ENSMUST00000210357.4	ENSMUSG00000057997.7	Olfr541	chr7	protein_coding	olfactory receptor 541
chr7	140349637	140350855	+	140349637;140350141	140349965;140350855	ES	0.5	50	50	ENSMUST00000026552.9	ENSMUSG00000025479.10	Cyp2e1	chr7	protein_coding	cytochrome P450, family 2, subfamily e, polypeptide 1
chr7	140349158	140349477	+	140349158	140352932	A3SS	0.5	50	50	ENSMUST00000210235.2	ENSMUSG00000025479.10	Cyp2e1	chr7	protein_coding	cytochrome P450, family 2, subfamily e, polypeptide 1
chr7	140350996	140352932	+	140349158	140352932	A5SS	0.5	50	50	ENSMUST00000210235.2	ENSMUSG00000025479.10	Cyp2e1	chr7	protein_coding	cytochrome P450, family 2, subfamily e, polypeptide 1
chr7	140360847	140367649	-	140360847;140362002	140361940;140367649	ES	0.5	50	50	ENSMUST00000026553.6	ENSMUSG00000025480.6	Syce1	chr7	protein_coding	synaptonemal complex central element protein 1
chr7	140398627	140434437	-	140398627	140401948	5pMXE	0.5	50	50	ENSMUST00000080651.13	ENSMUSG00000060314.14	Zfp941	chr7	protein_coding	zinc finger protein 941
chr7	140393227	140398377	-	140393227	140398501	A5SS	0.5	50	50	ENSMUST00000080651.13	ENSMUSG00000060314.14	Zfp941	chr7	protein_coding	zinc finger protein 941
chr7	140434536	140434987	-	140434536;140434734	140434678;140434987	ES	0.25	50	50	ENSMUST00000209690.2	ENSMUSG00000110136.2	Gm45785	chr7	protein_coding	predicted gene 45785
chr7	140435078;140435843	140435719;140436134	-	140435078	140436134	cassetteExon	0.5	100	100	ENSMUST00000209690.2	ENSMUSG00000110136.2	Gm45785	chr7	protein_coding	predicted gene 45785
chr7	140434714	140434987	-	140434734	140434987	A3SS	0.25	50	50	ENSMUST00000209690.2	ENSMUSG00000110136.2	Gm45785	chr7	protein_coding	predicted gene 45785
chr7	140434850	140434987	-	140434734	140434987	A3SS	0.25	50	50	ENSMUST00000209690.2	ENSMUSG00000110136.2	Gm45785	chr7	protein_coding	predicted gene 45785
chr7	140416795	140417496	+	140416795	140417599	A3SS	0.33	50	50	ENSMUST00000106050.8	ENSMUSG00000025481.13	Urah	chr7	protein_coding	urate (5-hydroxyiso-) hydrolase
chr7	140416795	140417620	+	140416795	140417599	A3SS	0.33	50	50	ENSMUST00000106050.8	ENSMUSG00000025481.13	Urah	chr7	protein_coding	urate (5-hydroxyiso-) hydrolase
chr7	140415315	140415525	+	140415171	140415525	A5SS	0.33	50	50	ENSMUST00000106050.8	ENSMUSG00000025481.13	Urah	chr7	protein_coding	urate (5-hydroxyiso-) hydrolase
chr7	140415368	140415525	+	140415171	140415525	A5SS	0.33	50	50	ENSMUST00000106050.8	ENSMUSG00000025481.13	Urah	chr7	protein_coding	urate (5-hydroxyiso-) hydrolase
chr7	140415368	140415525	+	140415315	140415525	A5SS	0.33	50	50	ENSMUST00000211372.2	ENSMUSG00000025481.13	Urah	chr7	protein_coding	urate (5-hydroxyiso-) hydrolase
chr7	140416795	140417620	+	140416795	140417496	A3SS	0.33	50	50	ENSMUST00000209978.2	ENSMUSG00000025481.13	Urah	chr7	protein_coding	urate (5-hydroxyiso-) hydrolase
chr7	140434536	140434987	-	140434536	140434678	A5SS	0.5	50	50	ENSMUST00000210195.2	ENSMUSG00000025484.10	Bet1l	chr7	protein_coding	Bet1 golgi vesicular membrane trafficking protein like
chr7	140436262	140437254	-	140436262;140436768	140436677;140437254	ES	0.5	50	50	ENSMUST00000211624.2	ENSMUSG00000025484.10	Bet1l	chr7	protein_coding	Bet1 golgi vesicular membrane trafficking protein like
chr7	140434536	140434987	-	140434536;140434714	140434678;140434987	ES	0.25	50	50	ENSMUST00000211590.2	ENSMUSG00000025484.10	Bet1l	chr7	protein_coding	Bet1 golgi vesicular membrane trafficking protein like
chr7	140434850	140434987	-	140434714	140434987	A3SS	0.25	50	50	ENSMUST00000211590.2	ENSMUSG00000025484.10	Bet1l	chr7	protein_coding	Bet1 golgi vesicular membrane trafficking protein like
chr7	140434536;140434850	140434678;140434987	-	140434536	140434987	cassetteExon	0.5	100	100	ENSMUST00000211527.2	ENSMUSG00000025484.10	Bet1l	chr7	protein_coding	Bet1 golgi vesicular membrane trafficking protein like
chr7	140434536	140434987	-	140434734	140434987	3pMXE	0.25	50	50	ENSMUST00000210710.2	ENSMUSG00000025484.10	Bet1l	chr7	protein_coding	Bet1 golgi vesicular membrane trafficking protein like
chr7	140436262	140437254	-	140436262	140436677	5pMXE	0.5	50	50	ENSMUST00000209318.2	ENSMUSG00000025484.10	Bet1l	chr7	protein_coding	Bet1 golgi vesicular membrane trafficking protein like
chr7	140437467	140437687	+	140437467	140437758	A3SS	0.5	50	50	ENSMUST00000026558.7	ENSMUSG00000025485.14	Ric8a	chr7	protein_coding	RIC8 guanine nucleotide exchange factor A
chr7	140441872	140443111	+	140441872	140442224	A3SS	0.5	50	50	ENSMUST00000026558.7	ENSMUSG00000025485.14	Ric8a	chr7	protein_coding	RIC8 guanine nucleotide exchange factor A
chr7	140437541	140437758	+	140437467	140437758	A5SS	0.5	50	50	ENSMUST00000026558.7	ENSMUSG00000025485.14	Ric8a	chr7	protein_coding	RIC8 guanine nucleotide exchange factor A
chr7	140445097	140449402	-	140445097;140445739	140445579;140449402	ES	0.33	50	50	ENSMUST00000210296.2	ENSMUSG00000025486.18	Sirt3	chr7	protein_coding	sirtuin 3
chr7	140445097;140447799	140447644;140449402	-	140445097;140445739	140445579;140449402	MXE	0.5	100	100	ENSMUST00000210296.2	ENSMUSG00000025486.18	Sirt3	chr7	protein_coding	sirtuin 3
chr7	140458058	140462071	-	140458050	140462071	A3SS	0.5	50	50	ENSMUST00000210296.2	ENSMUSG00000025486.18	Sirt3	chr7	protein_coding	sirtuin 3
chr7	140458050	140461676	-	140458050	140462071	A5SS	0.5	50	50	ENSMUST00000210296.2	ENSMUSG00000025486.18	Sirt3	chr7	protein_coding	sirtuin 3
chr7	140445097	140456267	-	140445097;140449563	140449402;140456267	ES	0.5	50	50	ENSMUST00000106048.10	ENSMUSG00000025486.18	Sirt3	chr7	protein_coding	sirtuin 3
chr7	140458058	140462071	-	140458058	140461676	5pMXE	0.5	50	50	ENSMUST00000106048.10	ENSMUSG00000025486.18	Sirt3	chr7	protein_coding	sirtuin 3
chr7	140445097;140447799	140447644;140449402	-	140445097	140449402	cassetteExon	0.5	100	100	ENSMUST00000106048.10	ENSMUSG00000025486.18	Sirt3	chr7	protein_coding	sirtuin 3
chr7	140457964	140461676	-	140458058	140461676	A3SS	0.33	50	50	ENSMUST00000106048.10	ENSMUSG00000025486.18	Sirt3	chr7	protein_coding	sirtuin 3
chr7	140458050	140461676	-	140458058	140461676	A3SS	0.33	50	50	ENSMUST00000106048.10	ENSMUSG00000025486.18	Sirt3	chr7	protein_coding	sirtuin 3
chr7	140445097	140445579	-	140445097	140456267	A5SS	0.25	50	50	ENSMUST00000137024.8	ENSMUSG00000025486.18	Sirt3	chr7	protein_coding	sirtuin 3
chr7	140445097	140447644	-	140445097	140456267	A5SS	0.25	50	50	ENSMUST00000137024.8	ENSMUSG00000025486.18	Sirt3	chr7	protein_coding	sirtuin 3
chr7	140445097	140456267	-	140449563	140456267	3pMXE	0.5	50	50	ENSMUST00000147331.9	ENSMUSG00000025486.18	Sirt3	chr7	protein_coding	sirtuin 3
chr7	140457964	140461676	-	140458050	140461676	A3SS	0.33	50	50	ENSMUST00000147331.9	ENSMUSG00000025486.18	Sirt3	chr7	protein_coding	sirtuin 3
chr7	140463491	140466424	+	140463491;140466335	140466301;140466424	ES	0.5	50	50	ENSMUST00000026560.14	ENSMUSG00000025487.16	Psmd13	chr7	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
chr7	140474456	140477521	+	140474456;140477410	140477330;140477521	ES	0.33	50	50	ENSMUST00000026560.14	ENSMUSG00000025487.16	Psmd13	chr7	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
chr7	140469389	140477521	+	140469389	140470245	A3SS&ES	0.5	50	50	ENSMUST00000151644.8	ENSMUSG00000025487.16	Psmd13	chr7	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
chr7	140474456	140477521	+	140474456	140477330	A3SS	0.5	50	50	ENSMUST00000151644.8	ENSMUSG00000025487.16	Psmd13	chr7	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
chr7	140463491	140466424	+	140463491	140466301	A3SS	0.5	50	50	ENSMUST00000146875.8	ENSMUSG00000025487.16	Psmd13	chr7	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
chr7	140474456	140477521	+	140469389	140477521	A5SS	0.33	50	50	ENSMUST00000164681.8	ENSMUSG00000025487.16	Psmd13	chr7	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
chr7	140477410	140477521	+	140469389	140477521	A5SS	0.33	50	50	ENSMUST00000164681.8	ENSMUSG00000025487.16	Psmd13	chr7	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
chr7	140486574	140486740	+	140486574	140487175	A3SS	0.33	50	50	ENSMUST00000210080.2	ENSMUSG00000109628.2	BC024386	chr7	lncRNA	cDNA sequence BC023486
chr7	140486574	140487172	+	140486574	140487175	A3SS	0.33	50	50	ENSMUST00000210080.2	ENSMUSG00000109628.2	BC024386	chr7	lncRNA	cDNA sequence BC023486
chr7	140487618	140487704	+	140487618	140487753	A3SS	0.5	50	50	ENSMUST00000210080.2	ENSMUSG00000109628.2	BC024386	chr7	lncRNA	cDNA sequence BC023486
chr7	140486049	140486279	+	140485978	140486279	A5SS	0.5	50	50	ENSMUST00000210080.2	ENSMUSG00000109628.2	BC024386	chr7	lncRNA	cDNA sequence BC023486
chr7	140486049	140486431	+	140486049	140486279	A3SS	0.5	50	50	ENSMUST00000209817.2	ENSMUSG00000109628.2	BC024386	chr7	lncRNA	cDNA sequence BC023486
chr7	140486574	140486740	+	140486574	140487172	A3SS	0.33	50	50	ENSMUST00000209817.2	ENSMUSG00000109628.2	BC024386	chr7	lncRNA	cDNA sequence BC023486
chr7	140486049	140486431	+	140486119	140486431	A5SS	0.5	50	50	ENSMUST00000209842.2	ENSMUSG00000109628.2	BC024386	chr7	lncRNA	cDNA sequence BC023486
chr7	140504069	140505029	+	140504069	140504990	A3SS	0.5	50	50	ENSMUST00000106045.8	ENSMUSG00000038745.16	Nlrp6	chr7	protein_coding	NLR family, pyrin domain containing 6
chr7	140521556;140522478	140522198;140522899	+	140521556	140522899	cassetteExon	0.5	100	100	ENSMUST00000164337.8	ENSMUSG00000062031.14	Pgghg	chr7	protein_coding	protein glucosylgalactosylhydroxylysine glucosidase
chr7	140521556;140522478	140522317;140522899	+	140521556	140522899	cassetteExon	0.5	100	100	ENSMUST00000164337.8	ENSMUSG00000062031.14	Pgghg	chr7	protein_coding	protein glucosylgalactosylhydroxylysine glucosidase
chr7	140525440;140525926	140525869;140526020	+	140525440;140525675	140525539;140526020	MXE	0.5	100	100	ENSMUST00000164337.8	ENSMUSG00000062031.14	Pgghg	chr7	protein_coding	protein glucosylgalactosylhydroxylysine glucosidase
chr7	140525675;140525926	140525793;140526020	+	140525675	140526020	cassetteExon	0.5	100	100	ENSMUST00000164337.8	ENSMUSG00000062031.14	Pgghg	chr7	protein_coding	protein glucosylgalactosylhydroxylysine glucosidase
chr7	140523109	140523170	+	140523109	140523190	A3SS	0.5	50	50	ENSMUST00000164337.8	ENSMUSG00000062031.14	Pgghg	chr7	protein_coding	protein glucosylgalactosylhydroxylysine glucosidase
chr7	140526626	140526707	+	140526626	140526702	A3SS	0.5	50	50	ENSMUST00000164337.8	ENSMUSG00000062031.14	Pgghg	chr7	protein_coding	protein glucosylgalactosylhydroxylysine glucosidase
chr7	140521556	140522317	+	140521556	140522198	A3SS	0.33	50	50	ENSMUST00000164580.3	ENSMUSG00000062031.14	Pgghg	chr7	protein_coding	protein glucosylgalactosylhydroxylysine glucosidase
chr7	140525440	140525869	+	140525440	140525539	A3SS&ES	0.5	50	50	ENSMUST00000164580.3	ENSMUSG00000062031.14	Pgghg	chr7	protein_coding	protein glucosylgalactosylhydroxylysine glucosidase
chr7	140521556	140522899	+	140522478	140522899	5pMXE	0.5	50	50	ENSMUST00000163094.9	ENSMUSG00000062031.14	Pgghg	chr7	protein_coding	protein glucosylgalactosylhydroxylysine glucosidase
chr7	140529361	140535583	-	140529361	140529931	5pMXE	0.5	50	50	ENSMUST00000026562.6	ENSMUSG00000025489.6	Ifitm5	chr7	protein_coding	interferon induced transmembrane protein 5
chr7	140535086	140535583	-	140529361	140535583	A3SS	0.5	50	50	ENSMUST00000211129.2	ENSMUSG00000110104.2	Gm45717	chr7	protein_coding	predicted gene 45717
chr7	140547964	140548153	+	140547479	140548153	A5SS	0.5	50	50	ENSMUST00000106042.9	ENSMUSG00000025491.15	Ifitm1	chr7	protein_coding	interferon induced transmembrane protein 1
chr7	140596780	140597286	-	140596780	140597789	A5SS	0.5	50	50	ENSMUST00000209328.2	ENSMUSG00000059108.5	Ifitm6	chr7	protein_coding	interferon induced transmembrane protein 6
chr7	140660014;140662101	140661975;140662255	+	140660014	140662255	cassetteExon	0.5	100	100	ENSMUST00000106039.9	ENSMUSG00000054065.13	Pkp3	chr7	protein_coding	plakophilin 3
chr7	140659108	140659819	+	140658347	140659819	A5SS	0.5	50	50	ENSMUST00000106039.9	ENSMUSG00000054065.13	Pkp3	chr7	protein_coding	plakophilin 3
chr7	140668297	140668394	+	140668314	140668394	A5SS	0.5	50	50	ENSMUST00000106039.9	ENSMUSG00000054065.13	Pkp3	chr7	protein_coding	plakophilin 3
chr7	140672608	140672891	-	140672642	140672891	A3SS	0.5	50	50	ENSMUST00000210167.2	ENSMUSG00000025494.9	Sigirr	chr7	protein_coding	single immunoglobulin and toll-interleukin 1 receptor (TIR) domain
chr7	140675230	140680392	-	140674858	140680392	A3SS	0.5	50	50	ENSMUST00000210167.2	ENSMUSG00000025494.9	Sigirr	chr7	protein_coding	single immunoglobulin and toll-interleukin 1 receptor (TIR) domain
chr7	140674858	140676473	-	140674858	140680392	A5SS	0.5	50	50	ENSMUST00000210167.2	ENSMUSG00000025494.9	Sigirr	chr7	protein_coding	single immunoglobulin and toll-interleukin 1 receptor (TIR) domain
chr7	140682439	140682975	-	140682439	140683000	A5SS	0.5	50	50	ENSMUST00000067836.9	ENSMUSG00000054662.9	Ano9	chr7	protein_coding	anoctamin 9
chr7	140684057	140684151	-	140684057	140684155	A5SS	0.5	50	50	ENSMUST00000067836.9	ENSMUSG00000054662.9	Ano9	chr7	protein_coding	anoctamin 9
chr7	140715323	140726994	+	140715323;140723088	140723006;140726994	ES	0.5	50	50	ENSMUST00000174373.8	ENSMUSG00000025495.16	Ptdss2	chr7	protein_coding	phosphatidylserine synthase 2
chr7	140723088	140723260	+	140723088	140726994	A3SS	0.5	50	50	ENSMUST00000174373.8	ENSMUSG00000025495.16	Ptdss2	chr7	protein_coding	phosphatidylserine synthase 2
chr7	140710267	140715222	+	140712519	140715222	A5SS&ES	0.33	50	50	ENSMUST00000174373.8	ENSMUSG00000025495.16	Ptdss2	chr7	protein_coding	phosphatidylserine synthase 2
chr7	140711430	140712410	+	140702307	140712410	A5SS	0.5	50	50	ENSMUST00000174373.8	ENSMUSG00000025495.16	Ptdss2	chr7	protein_coding	phosphatidylserine synthase 2
chr7	140711430	140715222	+	140712519	140715222	A5SS&ES	0.33	50	50	ENSMUST00000174373.8	ENSMUSG00000025495.16	Ptdss2	chr7	protein_coding	phosphatidylserine synthase 2
chr7	140711430	140715222	+	140710267	140715222	A5SS	0.33	50	50	ENSMUST00000172787.8	ENSMUSG00000025495.16	Ptdss2	chr7	protein_coding	phosphatidylserine synthase 2
chr7	140711430;140712519	140712410;140715222	+	140711430	140715222	cassetteExon	0.5	100	100	ENSMUST00000026568.10	ENSMUSG00000025495.16	Ptdss2	chr7	protein_coding	phosphatidylserine synthase 2
chr7	140734615	140734851	+	140734615	140734724	A3SS	0.5	50	50	ENSMUST00000026568.10	ENSMUSG00000025495.16	Ptdss2	chr7	protein_coding	phosphatidylserine synthase 2
chr7	140715323	140726994	+	140715323	140723006	3pMXE	0.5	50	50	ENSMUST00000174058.8	ENSMUSG00000025495.16	Ptdss2	chr7	protein_coding	phosphatidylserine synthase 2
chr7	140746700	140752655	-	140746700	140748487	5pMXE	0.2	50	50	ENSMUST00000210314.2	ENSMUSG00000038650.16	Rnh1	chr7	protein_coding	ribonuclease/angiogenin inhibitor 1
chr7	140746700	140747822	-	140746700	140748487	A5SS	0.2	50	50	ENSMUST00000210314.2	ENSMUSG00000038650.16	Rnh1	chr7	protein_coding	ribonuclease/angiogenin inhibitor 1
chr7	140746700	140748039	-	140746700	140748487	A5SS	0.2	50	50	ENSMUST00000210314.2	ENSMUSG00000038650.16	Rnh1	chr7	protein_coding	ribonuclease/angiogenin inhibitor 1
chr7	140746700	140748589	-	140746700	140748487	A5SS	0.2	50	50	ENSMUST00000210314.2	ENSMUSG00000038650.16	Rnh1	chr7	protein_coding	ribonuclease/angiogenin inhibitor 1
chr7	140746700	140752655	-	140746700	140748589	5pMXE	0.2	50	50	ENSMUST00000106033.5	ENSMUSG00000038650.16	Rnh1	chr7	protein_coding	ribonuclease/angiogenin inhibitor 1
chr7	140746700	140747822	-	140746700	140748589	A5SS	0.2	50	50	ENSMUST00000106033.5	ENSMUSG00000038650.16	Rnh1	chr7	protein_coding	ribonuclease/angiogenin inhibitor 1
chr7	140746700	140748039	-	140746700	140748589	A5SS	0.2	50	50	ENSMUST00000106033.5	ENSMUSG00000038650.16	Rnh1	chr7	protein_coding	ribonuclease/angiogenin inhibitor 1
chr7	140746700	140747822	-	140746700	140752655	A5SS	0.2	50	50	ENSMUST00000167493.9	ENSMUSG00000038650.16	Rnh1	chr7	protein_coding	ribonuclease/angiogenin inhibitor 1
chr7	140746700	140748039	-	140746700	140752655	A5SS	0.2	50	50	ENSMUST00000167493.9	ENSMUSG00000038650.16	Rnh1	chr7	protein_coding	ribonuclease/angiogenin inhibitor 1
chr7	140746700	140748039	-	140746700	140747822	A5SS	0.2	50	50	ENSMUST00000209378.2	ENSMUSG00000038650.16	Rnh1	chr7	protein_coding	ribonuclease/angiogenin inhibitor 1
chr7	140771380;140771949	140771868;140772044	-	140771380	140772044	cassetteExon	0.5	100	100	ENSMUST00000026572.11	ENSMUSG00000025499.19	Hras	chr7	protein_coding	Harvey rat sarcoma virus oncogene
chr7	140771140	140771255	-	140771107	140771255	A3SS	0.5	50	50	ENSMUST00000026572.11	ENSMUSG00000025499.19	Hras	chr7	protein_coding	Harvey rat sarcoma virus oncogene
chr7	140772253	140772355	-	140772203	140772355	A3SS	0.5	50	50	ENSMUST00000026572.11	ENSMUSG00000025499.19	Hras	chr7	protein_coding	Harvey rat sarcoma virus oncogene
chr7	140771380	140772044	-	140771380	140771868	5pMXE	0.5	50	50	ENSMUST00000134008.2	ENSMUSG00000025499.19	Hras	chr7	protein_coding	Harvey rat sarcoma virus oncogene
chr7	140777082	140779692	+	140777082;140778274	140778187;140779692	ES	0.5	50	50	ENSMUST00000084446.9	ENSMUSG00000038637.16	Lrrc56	chr7	protein_coding	leucine rich repeat containing 56
chr7	140787163;140787536	140787400;140787744	+	140787163	140787744	cassetteExon	0.5	100	100	ENSMUST00000084446.9	ENSMUSG00000038637.16	Lrrc56	chr7	protein_coding	leucine rich repeat containing 56
chr7	140777082	140778131	+	140777082	140778187	A3SS	0.33	50	50	ENSMUST00000084446.9	ENSMUSG00000038637.16	Lrrc56	chr7	protein_coding	leucine rich repeat containing 56
chr7	140775129	140775821	+	140774530	140775821	A5SS	0.5	50	50	ENSMUST00000084446.9	ENSMUSG00000038637.16	Lrrc56	chr7	protein_coding	leucine rich repeat containing 56
chr7	140777082	140779692	+	140778274	140779692	A5SS	0.5	50	50	ENSMUST00000144199.2	ENSMUSG00000038637.16	Lrrc56	chr7	protein_coding	leucine rich repeat containing 56
chr7	140777082	140779692	+	140777082	140778131	3pMXE	0.33	50	50	ENSMUST00000150141.2	ENSMUSG00000038637.16	Lrrc56	chr7	protein_coding	leucine rich repeat containing 56
chr7	140777082;140778274	140778131;140779692	+	140777082	140779692	cassetteExon	0.5	100	100	ENSMUST00000209220.2	ENSMUSG00000038637.16	Lrrc56	chr7	protein_coding	leucine rich repeat containing 56
chr7	140793232	140793547	-	140793202	140793547	A3SS	0.5	50	50	ENSMUST00000026573.7	ENSMUSG00000025500.13	Lmntd2	chr7	protein_coding	lamin tail domain containing 2
chr7	140795853	140796913	+	140795853;140796764	140796634;140796913	ES	0.5	50	50	ENSMUST00000046890.12	ENSMUSG00000038618.13	Rassf7	chr7	protein_coding	Ras association (RalGDS/AF-6) domain family (N-terminal) member 7
chr7	140796764	140796942	+	140796764	140796913	A3SS	0.33	50	50	ENSMUST00000046890.12	ENSMUSG00000038618.13	Rassf7	chr7	protein_coding	Ras association (RalGDS/AF-6) domain family (N-terminal) member 7
chr7	140796764	140797501	+	140796764	140796913	A3SS	0.33	50	50	ENSMUST00000046890.12	ENSMUSG00000038618.13	Rassf7	chr7	protein_coding	Ras association (RalGDS/AF-6) domain family (N-terminal) member 7
chr7	140796024	140796634	+	140795853	140796634	A5SS	0.25	50	50	ENSMUST00000046890.12	ENSMUSG00000038618.13	Rassf7	chr7	protein_coding	Ras association (RalGDS/AF-6) domain family (N-terminal) member 7
chr7	140796147	140796634	+	140795853	140796634	A5SS	0.25	50	50	ENSMUST00000046890.12	ENSMUSG00000038618.13	Rassf7	chr7	protein_coding	Ras association (RalGDS/AF-6) domain family (N-terminal) member 7
chr7	140796172	140796634	+	140795853	140796634	A5SS	0.25	50	50	ENSMUST00000046890.12	ENSMUSG00000038618.13	Rassf7	chr7	protein_coding	Ras association (RalGDS/AF-6) domain family (N-terminal) member 7
chr7	140795853	140796913	+	140795853	140796634	A3SS&ES	0.5	50	50	ENSMUST00000127613.2	ENSMUSG00000038618.13	Rassf7	chr7	protein_coding	Ras association (RalGDS/AF-6) domain family (N-terminal) member 7
chr7	140796764	140797501	+	140796764	140796942	A3SS	0.33	50	50	ENSMUST00000127613.2	ENSMUSG00000038618.13	Rassf7	chr7	protein_coding	Ras association (RalGDS/AF-6) domain family (N-terminal) member 7
chr7	140796024	140796634	+	140796147	140796634	A5SS	0.25	50	50	ENSMUST00000210993.2	ENSMUSG00000038618.13	Rassf7	chr7	protein_coding	Ras association (RalGDS/AF-6) domain family (N-terminal) member 7
chr7	140796172	140796634	+	140796147	140796634	A5SS	0.25	50	50	ENSMUST00000210993.2	ENSMUSG00000038618.13	Rassf7	chr7	protein_coding	Ras association (RalGDS/AF-6) domain family (N-terminal) member 7
chr7	140796172	140796634	+	140796024	140796634	A5SS	0.25	50	50	ENSMUST00000133763.8	ENSMUSG00000038618.13	Rassf7	chr7	protein_coding	Ras association (RalGDS/AF-6) domain family (N-terminal) member 7
chr7	140795853	140796913	+	140796764	140796913	5pMXE	0.5	50	50	ENSMUST00000141804.2	ENSMUSG00000038618.13	Rassf7	chr7	protein_coding	Ras association (RalGDS/AF-6) domain family (N-terminal) member 7
chr7	140823809;140826857	140826760;140827134	+	140823809	140827134	cassetteExon	0.5	100	100	ENSMUST00000155123.8	ENSMUSG00000038611.18	Phrf1	chr7	protein_coding	PHD and ring finger domains 1
chr7	140836835	140837162	+	140836835	140837257	A3SS	0.5	50	50	ENSMUST00000155123.8	ENSMUSG00000038611.18	Phrf1	chr7	protein_coding	PHD and ring finger domains 1
chr7	140840620	140840828	+	140840620	140840873	A3SS	0.5	50	50	ENSMUST00000155123.8	ENSMUSG00000038611.18	Phrf1	chr7	protein_coding	PHD and ring finger domains 1
chr7	140841027	140841201	+	140841027	140841126	A3SS	0.5	50	50	ENSMUST00000155123.8	ENSMUSG00000038611.18	Phrf1	chr7	protein_coding	PHD and ring finger domains 1
chr7	140814159	140817410	+	140812454	140817410	A5SS	0.5	50	50	ENSMUST00000155123.8	ENSMUSG00000038611.18	Phrf1	chr7	protein_coding	PHD and ring finger domains 1
chr7	140843961	140844406	-	140843961;140844228	140844136;140844406	ES	0.5	50	50	ENSMUST00000106023.8	ENSMUSG00000025498.16	Irf7	chr7	protein_coding	interferon regulatory factor 7
chr7	140844472	140844988	-	140844472;140844696	140844638;140844988	ES	0.33	50	50	ENSMUST00000106023.8	ENSMUSG00000025498.16	Irf7	chr7	protein_coding	interferon regulatory factor 7
chr7	140844568	140844638	-	140844472	140844638	A3SS	0.5	50	50	ENSMUST00000106023.8	ENSMUSG00000025498.16	Irf7	chr7	protein_coding	interferon regulatory factor 7
chr7	140845452	140845822	-	140845452	140845536	A5SS	0.5	50	50	ENSMUST00000106023.8	ENSMUSG00000025498.16	Irf7	chr7	protein_coding	interferon regulatory factor 7
chr7	140844472	140844988	-	140844696	140844988	A3SS&ES	0.33	50	50	ENSMUST00000026571.11	ENSMUSG00000025498.16	Irf7	chr7	protein_coding	interferon regulatory factor 7
chr7	140844472;140844696	140844638;140845536	-	140844472;140845452	140844988;140845536	MXE	0.5	100	100	ENSMUST00000209899.2	ENSMUSG00000025498.16	Irf7	chr7	protein_coding	interferon regulatory factor 7
chr7	140843961;140844472	140844136;140844988	-	140843961	140844988	cassetteExon	0.5	100	100	ENSMUST00000123525.2	ENSMUSG00000025498.16	Irf7	chr7	protein_coding	interferon regulatory factor 7
chr7	140843961;140844472	140844406;140844988	-	140843961	140844988	cassetteExon	0.5	100	100	ENSMUST00000123525.2	ENSMUSG00000025498.16	Irf7	chr7	protein_coding	interferon regulatory factor 7
chr7	140843961;140844696	140844406;140844988	-	140843961	140844988	cassetteExon	0.5	100	100	ENSMUST00000123525.2	ENSMUSG00000025498.16	Irf7	chr7	protein_coding	interferon regulatory factor 7
chr7	140844696	140845536	-	140844696	140844988	5pMXE	0.5	50	50	ENSMUST00000127223.8	ENSMUSG00000025498.16	Irf7	chr7	protein_coding	interferon regulatory factor 7
chr7	140843961	140844406	-	140844228	140844406	A3SS	0.5	50	50	ENSMUST00000127223.8	ENSMUSG00000025498.16	Irf7	chr7	protein_coding	interferon regulatory factor 7
chr7	140843961	140844988	-	140844696	140844988	A3SS&ES	0.33	50	50	ENSMUST00000127223.8	ENSMUSG00000025498.16	Irf7	chr7	protein_coding	interferon regulatory factor 7
chr7	140843961;140845452	140844988;140845536	-	140843961;140844696	140844136;140845536	MXE	0.5	100	100	ENSMUST00000131399.8	ENSMUSG00000025498.16	Irf7	chr7	protein_coding	interferon regulatory factor 7
chr7	140844696;140845452	140844988;140845536	-	140844696	140845536	cassetteExon	0.5	100	100	ENSMUST00000131399.8	ENSMUSG00000025498.16	Irf7	chr7	protein_coding	interferon regulatory factor 7
chr7	140844696	140845536	-	140845452	140845536	3pMXE	0.5	50	50	ENSMUST00000127161.2	ENSMUSG00000025498.16	Irf7	chr7	protein_coding	interferon regulatory factor 7
chr7	140849930	140852176	-	140849930;140852098	140852014;140852176	ES	0.5	50	50	ENSMUST00000080654.7	ENSMUSG00000025497.16	Cdhr5	chr7	protein_coding	cadherin-related family member 5
chr7	140849930;140851633	140851430;140852014	-	140849930	140852014	cassetteExon	0.5	100	100	ENSMUST00000080654.7	ENSMUSG00000025497.16	Cdhr5	chr7	protein_coding	cadherin-related family member 5
chr7	140849930;140851915	140851430;140852014	-	140849930	140852014	cassetteExon	0.5	100	100	ENSMUST00000080654.7	ENSMUSG00000025497.16	Cdhr5	chr7	protein_coding	cadherin-related family member 5
chr7	140851633	140852014	-	140851915	140852014	A3SS	0.33	50	50	ENSMUST00000167263.9	ENSMUSG00000025497.16	Cdhr5	chr7	protein_coding	cadherin-related family member 5
chr7	140849930	140851430	-	140849930	140852176	A5SS	0.33	50	50	ENSMUST00000210773.2	ENSMUSG00000025497.16	Cdhr5	chr7	protein_coding	cadherin-related family member 5
chr7	140858452	140858531	-	140858434	140858531	A3SS	0.5	50	50	ENSMUST00000210928.2	ENSMUSG00000038580.14	Sct	chr7	protein_coding	secretin
chr7	140858628	140858746	-	140858635	140858746	A3SS	0.5	50	50	ENSMUST00000046156.13	ENSMUSG00000038580.14	Sct	chr7	protein_coding	secretin
chr7	140877529	140890675	-	140877529;140881602	140881513;140890675	ES	0.25	50	50	ENSMUST00000080553.9	ENSMUSG00000058886.10	Deaf1	chr7	protein_coding	DEAF1, transcription factor
chr7	140894375	140901023	-	140894375;140894901	140894775;140901023	ES	0.33	50	50	ENSMUST00000080553.9	ENSMUSG00000058886.10	Deaf1	chr7	protein_coding	DEAF1, transcription factor
chr7	140902521	140903995	-	140902521;140902932	140902803;140903995	ES	0.5	50	50	ENSMUST00000080553.9	ENSMUSG00000058886.10	Deaf1	chr7	protein_coding	DEAF1, transcription factor
chr7	140881602;140887540	140887400;140890675	-	140881602	140890675	cassetteExon	0.5	100	100	ENSMUST00000080553.9	ENSMUSG00000058886.10	Deaf1	chr7	protein_coding	DEAF1, transcription factor
chr7	140894901;140895160	140894991;140901023	-	140894901	140901023	cassetteExon	0.5	100	100	ENSMUST00000080553.9	ENSMUSG00000058886.10	Deaf1	chr7	protein_coding	DEAF1, transcription factor
chr7	140904092;140904529	140904355;140907192	-	140904092	140907192	cassetteExon	0.5	100	100	ENSMUST00000080553.9	ENSMUSG00000058886.10	Deaf1	chr7	protein_coding	DEAF1, transcription factor
chr7	140881599	140890675	-	140881602	140890675	A3SS	0.25	50	50	ENSMUST00000080553.9	ENSMUSG00000058886.10	Deaf1	chr7	protein_coding	DEAF1, transcription factor
chr7	140877529;140881599	140881513;140890675	-	140877529	140890675	cassetteExon	0.5	100	100	ENSMUST00000209600.2	ENSMUSG00000058886.10	Deaf1	chr7	protein_coding	DEAF1, transcription factor
chr7	140887540	140890675	-	140877529	140890675	A3SS	0.25	50	50	ENSMUST00000209600.2	ENSMUSG00000058886.10	Deaf1	chr7	protein_coding	DEAF1, transcription factor
chr7	140881599	140890675	-	140887540	140890675	A3SS&ES	0.25	50	50	ENSMUST00000211146.2	ENSMUSG00000058886.10	Deaf1	chr7	protein_coding	DEAF1, transcription factor
chr7	140877529	140890675	-	140881599	140890675	3pMXE	0.25	50	50	ENSMUST00000211537.2	ENSMUSG00000058886.10	Deaf1	chr7	protein_coding	DEAF1, transcription factor
chr7	140894375;140895160	140894775;140901023	-	140894375	140901023	cassetteExon	0.5	100	100	ENSMUST00000210816.2	ENSMUSG00000058886.10	Deaf1	chr7	protein_coding	DEAF1, transcription factor
chr7	140908179;140911474	140911331;140912823	+	140908179	140912823	cassetteExon	0.5	100	100	ENSMUST00000155657.2	ENSMUSG00000025505.17	Tmem80	chr7	protein_coding	transmembrane protein 80
chr7	140913644	140915758	+	140913644;140914016	140913924;140915758	ES	0.5	50	50	ENSMUST00000126510.8	ENSMUSG00000025505.17	Tmem80	chr7	protein_coding	transmembrane protein 80
chr7	140913644	140915758	+	140914016	140915758	A5SS	0.5	50	50	ENSMUST00000134221.2	ENSMUSG00000025505.17	Tmem80	chr7	protein_coding	transmembrane protein 80
chr7	140918971;140920098	140920060;140921806	+	140918971	140921806	cassetteExon	0.5	100	100	ENSMUST00000026577.13	ENSMUSG00000025504.15	Eps8l2	chr7	protein_coding	EPS8-like 2
chr7	140922903;140930219	140930037;140934859	+	140922903	140934859	cassetteExon	0.5	100	100	ENSMUST00000026577.13	ENSMUSG00000025504.15	Eps8l2	chr7	protein_coding	EPS8-like 2
chr7	140922903	140923656	+	140922903	140934859	A3SS	0.33	50	50	ENSMUST00000026577.13	ENSMUSG00000025504.15	Eps8l2	chr7	protein_coding	EPS8-like 2
chr7	140941087	140941294	+	140941034	140941294	A5SS	0.5	50	50	ENSMUST00000026577.13	ENSMUSG00000025504.15	Eps8l2	chr7	protein_coding	EPS8-like 2
chr7	140922903	140930037	+	140922903	140923656	3pMXE	0.33	50	50	ENSMUST00000210251.2	ENSMUSG00000025504.15	Eps8l2	chr7	protein_coding	EPS8-like 2
chr7	140941949	140944948	-	140942732	140944948	A3SS	0.5	50	50	ENSMUST00000134845.2	ENSMUSG00000086844.2	B230206H07Rik	chr7	lncRNA	RIKEN cDNA B230206H07 gene
chr7	140972231	140975962	+	140972231;140975657	140975523;140975962	ES	0.5	50	50	ENSMUST00000211654.2	ENSMUSG00000025503.6	Taldo1	chr7	protein_coding	transaldolase 1
chr7	140979378	140980201	+	140978515	140980201	A5SS	0.5	50	50	ENSMUST00000211654.2	ENSMUSG00000025503.6	Taldo1	chr7	protein_coding	transaldolase 1
chr7	140990798	140991726	-	140990798	140990899	A5SS&ES	0.5	50	50	ENSMUST00000106008.3	ENSMUSG00000051007.16	Gatd1	chr7	protein_coding	glutamine amidotransferase like class 1 domain containing 1
chr7	141007916	141009188	-	141007916	141009225	A5SS	0.33	50	50	ENSMUST00000084436.10	ENSMUSG00000060240.13	Cend1	chr7	protein_coding	cell cycle exit and neuronal differentiation 1
chr7	141007916	141009230	-	141007916	141009225	A5SS	0.33	50	50	ENSMUST00000084436.10	ENSMUSG00000060240.13	Cend1	chr7	protein_coding	cell cycle exit and neuronal differentiation 1
chr7	141007916	141009188	-	141007916	141009230	A5SS	0.33	50	50	ENSMUST00000124444.2	ENSMUSG00000060240.13	Cend1	chr7	protein_coding	cell cycle exit and neuronal differentiation 1
chr7	141011171	141011415	-	141011171;141011338	141011263;141011415	ES	0.5	50	50	ENSMUST00000019226.14	ENSMUSG00000019082.19	Slc25a22	chr7	protein_coding	solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr7	141011462	141011934	-	141011826	141011934	A3SS&ES	0.5	50	50	ENSMUST00000019226.14	ENSMUSG00000019082.19	Slc25a22	chr7	protein_coding	solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr7	141012048	141012576	-	141012052	141012576	A3SS	0.33	50	50	ENSMUST00000019226.14	ENSMUSG00000019082.19	Slc25a22	chr7	protein_coding	solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr7	141012071	141012576	-	141012052	141012576	A3SS	0.33	50	50	ENSMUST00000019226.14	ENSMUSG00000019082.19	Slc25a22	chr7	protein_coding	solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr7	141012052	141012527	-	141012052	141012576	A5SS	0.5	50	50	ENSMUST00000019226.14	ENSMUSG00000019082.19	Slc25a22	chr7	protein_coding	solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr7	141012666	141013489	-	141012666	141013494	A5SS	0.33	50	50	ENSMUST00000019226.14	ENSMUSG00000019082.19	Slc25a22	chr7	protein_coding	solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr7	141012666	141013506	-	141012666	141013494	A5SS	0.33	50	50	ENSMUST00000019226.14	ENSMUSG00000019082.19	Slc25a22	chr7	protein_coding	solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr7	141013938	141014214	-	141013938	141014069	A5SS	0.5	50	50	ENSMUST00000019226.14	ENSMUSG00000019082.19	Slc25a22	chr7	protein_coding	solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr7	141014242	141014382	-	141014242	141017482	A5SS	0.16	50	50	ENSMUST00000019226.14	ENSMUSG00000019082.19	Slc25a22	chr7	protein_coding	solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr7	141014242	141014444	-	141014242	141017482	A5SS	0.16	50	50	ENSMUST00000019226.14	ENSMUSG00000019082.19	Slc25a22	chr7	protein_coding	solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr7	141014242	141014500	-	141014242	141017482	A5SS	0.16	50	50	ENSMUST00000019226.14	ENSMUSG00000019082.19	Slc25a22	chr7	protein_coding	solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr7	141014242	141015201	-	141014242	141017482	A5SS	0.16	50	50	ENSMUST00000019226.14	ENSMUSG00000019082.19	Slc25a22	chr7	protein_coding	solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr7	141014242	141017468	-	141014242	141017482	A5SS	0.16	50	50	ENSMUST00000019226.14	ENSMUSG00000019082.19	Slc25a22	chr7	protein_coding	solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr7	141014242	141015201	-	141014242	141014444	5pMXE	0.16	50	50	ENSMUST00000106007.10	ENSMUSG00000019082.19	Slc25a22	chr7	protein_coding	solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr7	141014242	141017468	-	141014242	141014444	5pMXE	0.16	50	50	ENSMUST00000106007.10	ENSMUSG00000019082.19	Slc25a22	chr7	protein_coding	solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr7	141014242	141014382	-	141014242	141014444	A5SS	0.16	50	50	ENSMUST00000106007.10	ENSMUSG00000019082.19	Slc25a22	chr7	protein_coding	solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr7	141014242	141014500	-	141014242	141014444	A5SS	0.16	50	50	ENSMUST00000106007.10	ENSMUSG00000019082.19	Slc25a22	chr7	protein_coding	solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr7	141014242	141014382	-	141014242	141017468	A5SS	0.16	50	50	ENSMUST00000106006.8	ENSMUSG00000019082.19	Slc25a22	chr7	protein_coding	solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr7	141014242	141014500	-	141014242	141017468	A5SS	0.16	50	50	ENSMUST00000106006.8	ENSMUSG00000019082.19	Slc25a22	chr7	protein_coding	solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr7	141014242	141015201	-	141014242	141017468	A5SS	0.16	50	50	ENSMUST00000106006.8	ENSMUSG00000019082.19	Slc25a22	chr7	protein_coding	solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr7	141012048	141012576	-	141012071	141012576	A3SS	0.33	50	50	ENSMUST00000124266.8	ENSMUSG00000019082.19	Slc25a22	chr7	protein_coding	solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr7	141011171	141011415	-	141011338	141011415	3pMXE	0.5	50	50	ENSMUST00000144174.8	ENSMUSG00000019082.19	Slc25a22	chr7	protein_coding	solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr7	141014242	141014382	-	141014242	141015201	A5SS	0.16	50	50	ENSMUST00000138865.8	ENSMUSG00000019082.19	Slc25a22	chr7	protein_coding	solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr7	141014242	141014500	-	141014242	141015201	A5SS	0.16	50	50	ENSMUST00000138865.8	ENSMUSG00000019082.19	Slc25a22	chr7	protein_coding	solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr7	141012666	141013489	-	141012666	141013506	A5SS	0.33	50	50	ENSMUST00000201127.5	ENSMUSG00000019082.19	Slc25a22	chr7	protein_coding	solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr7	141013938;141014136	141014069;141014214	-	141013938	141014214	cassetteExon	0.5	100	100	ENSMUST00000172654.8	ENSMUSG00000019082.19	Slc25a22	chr7	protein_coding	solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr7	141014242	141014382	-	141014242	141014500	A5SS	0.16	50	50	ENSMUST00000202840.4	ENSMUSG00000019082.19	Slc25a22	chr7	protein_coding	solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr7	141020434	141020599	-	141020518	141020599	A3SS	0.5	50	50	ENSMUST00000190068.7	ENSMUSG00000025507.14	Pidd1	chr7	protein_coding	p53 induced death domain protein 1
chr7	141021229	141021388	-	141021287	141021388	A3SS	0.5	50	50	ENSMUST00000190068.7	ENSMUSG00000025507.14	Pidd1	chr7	protein_coding	p53 induced death domain protein 1
chr7	141021734	141022064	-	141021697	141022064	A3SS	0.33	50	50	ENSMUST00000190068.7	ENSMUSG00000025507.14	Pidd1	chr7	protein_coding	p53 induced death domain protein 1
chr7	141021773	141022064	-	141021697	141022064	A3SS	0.33	50	50	ENSMUST00000190068.7	ENSMUSG00000025507.14	Pidd1	chr7	protein_coding	p53 induced death domain protein 1
chr7	141021773	141022064	-	141021734	141022064	A3SS	0.33	50	50	ENSMUST00000128703.8	ENSMUSG00000025507.14	Pidd1	chr7	protein_coding	p53 induced death domain protein 1
chr7	141023147	141023882	-	141023266	141023882	A3SS	0.5	50	50	ENSMUST00000131980.8	ENSMUSG00000025507.14	Pidd1	chr7	protein_coding	p53 induced death domain protein 1
chr7	141027654	141027821	+	141027620	141027821	A5SS	0.5	50	50	ENSMUST00000084434.11	ENSMUSG00000025508.14	Rplp2	chr7	protein_coding	ribosomal protein, large P2
chr7	141038403	141038758	+	141038403;141038672	141038505;141038758	ES	0.5	50	50	ENSMUST00000164016.8	ENSMUSG00000025509.16	Pnpla2	chr7	protein_coding	patatin-like phospholipase domain containing 2
chr7	141035386;141036562	141036481;141037186	+	141035386	141037186	cassetteExon	0.5	100	100	ENSMUST00000164016.8	ENSMUSG00000025509.16	Pnpla2	chr7	protein_coding	patatin-like phospholipase domain containing 2
chr7	141037570	141037997	+	141037570	141037918	A3SS	0.33	50	50	ENSMUST00000164016.8	ENSMUSG00000025509.16	Pnpla2	chr7	protein_coding	patatin-like phospholipase domain containing 2
chr7	141037570	141038020	+	141037570	141037918	A3SS	0.33	50	50	ENSMUST00000164016.8	ENSMUSG00000025509.16	Pnpla2	chr7	protein_coding	patatin-like phospholipase domain containing 2
chr7	141035577	141037186	+	141035386	141037186	A5SS	0.33	50	50	ENSMUST00000164016.8	ENSMUSG00000025509.16	Pnpla2	chr7	protein_coding	patatin-like phospholipase domain containing 2
chr7	141035577	141037186	+	141036562	141037186	A5SS&ES	0.33	50	50	ENSMUST00000026583.15	ENSMUSG00000025509.16	Pnpla2	chr7	protein_coding	patatin-like phospholipase domain containing 2
chr7	141037570	141037997	+	141037570	141038020	A3SS	0.33	50	50	ENSMUST00000169665.8	ENSMUSG00000025509.16	Pnpla2	chr7	protein_coding	patatin-like phospholipase domain containing 2
chr7	141038403	141038758	+	141038403	141038505	3pMXE	0.5	50	50	ENSMUST00000169723.2	ENSMUSG00000025509.16	Pnpla2	chr7	protein_coding	patatin-like phospholipase domain containing 2
chr7	141045269	141045679	+	141045269;141045598	141045432;141045679	ES	0.5	50	50	ENSMUST00000053670.12	ENSMUSG00000048200.13	Cracr2b	chr7	protein_coding	calcium release activated channel regulator 2B
chr7	141045750	141045922	+	141045750	141045959	A3SS	0.5	50	50	ENSMUST00000053670.12	ENSMUSG00000048200.13	Cracr2b	chr7	protein_coding	calcium release activated channel regulator 2B
chr7	141041846	141043297	+	141041102	141043297	A5SS	0.33	50	50	ENSMUST00000053670.12	ENSMUSG00000048200.13	Cracr2b	chr7	protein_coding	calcium release activated channel regulator 2B
chr7	141042332	141043297	+	141041102	141043297	A5SS	0.33	50	50	ENSMUST00000053670.12	ENSMUSG00000048200.13	Cracr2b	chr7	protein_coding	calcium release activated channel regulator 2B
chr7	141042332	141043297	+	141041846	141043297	A5SS	0.33	50	50	ENSMUST00000167491.8	ENSMUSG00000048200.13	Cracr2b	chr7	protein_coding	calcium release activated channel regulator 2B
chr7	141045269	141045959	+	141045269;141045750	141045679;141045959	ES	0.5	50	50	ENSMUST00000170879.4	ENSMUSG00000048200.13	Cracr2b	chr7	protein_coding	calcium release activated channel regulator 2B
chr7	141045269	141045679	+	141045269	141045432	3pMXE	0.33	50	50	ENSMUST00000167572.2	ENSMUSG00000048200.13	Cracr2b	chr7	protein_coding	calcium release activated channel regulator 2B
chr7	141045269	141045959	+	141045269	141045432	3pMXE	0.33	50	50	ENSMUST00000167572.2	ENSMUSG00000048200.13	Cracr2b	chr7	protein_coding	calcium release activated channel regulator 2B
chr7	141045269;141045750	141045432;141045959	+	141045269	141045959	cassetteExon	0.5	100	100	ENSMUST00000171994.2	ENSMUSG00000048200.13	Cracr2b	chr7	protein_coding	calcium release activated channel regulator 2B
chr7	141045269	141045679	+	141045598	141045679	5pMXE	0.5	50	50	ENSMUST00000116247.3	ENSMUSG00000048200.13	Cracr2b	chr7	protein_coding	calcium release activated channel regulator 2B
chr7	141042176	141043540	-	141042176	141046795	A5SS	0.5	50	50	ENSMUST00000097947.4	ENSMUSG00000073787.5	Gm10575	chr7	lncRNA	predicted gene 10575
chr7	141047497	141049168	+	141047497	141048332	3pMXE	0.5	50	50	ENSMUST00000211522.2	ENSMUSG00000025510.15	Cd151	chr7	protein_coding	CD151 antigen
chr7	141047379	141048332	+	141047497	141048332	A5SS	0.5	50	50	ENSMUST00000211522.2	ENSMUSG00000025510.15	Cd151	chr7	protein_coding	CD151 antigen
chr7	141047497	141049168	+	141047497;141048459	141048332;141049168	ES	0.25	50	50	ENSMUST00000106000.10	ENSMUSG00000025510.15	Cd151	chr7	protein_coding	CD151 antigen
chr7	141047379	141049168	+	141048459	141049168	A5SS&ES	0.25	50	50	ENSMUST00000106000.10	ENSMUSG00000025510.15	Cd151	chr7	protein_coding	CD151 antigen
chr7	141048809	141049168	+	141048459	141049168	A5SS	0.25	50	50	ENSMUST00000106000.10	ENSMUSG00000025510.15	Cd151	chr7	protein_coding	CD151 antigen
chr7	141047379;141048459	141048332;141049168	+	141047379	141049168	cassetteExon	0.5	100	100	ENSMUST00000209892.2	ENSMUSG00000025510.15	Cd151	chr7	protein_coding	CD151 antigen
chr7	141047379;141048809	141048332;141049168	+	141047379	141049168	cassetteExon	0.5	100	100	ENSMUST00000209892.2	ENSMUSG00000025510.15	Cd151	chr7	protein_coding	CD151 antigen
chr7	141047497	141049168	+	141047379	141049168	A5SS	0.25	50	50	ENSMUST00000209892.2	ENSMUSG00000025510.15	Cd151	chr7	protein_coding	CD151 antigen
chr7	141047497	141049168	+	141048459	141049168	A5SS&ES	0.25	50	50	ENSMUST00000177840.9	ENSMUSG00000025510.15	Cd151	chr7	protein_coding	CD151 antigen
chr7	141047497;141048809	141048332;141049168	+	141047497	141049168	cassetteExon	0.5	100	100	ENSMUST00000209988.2	ENSMUSG00000025510.15	Cd151	chr7	protein_coding	CD151 antigen
chr7	141047379	141049168	+	141048809	141049168	5pMXE	0.25	50	50	ENSMUST00000058746.7	ENSMUSG00000025510.15	Cd151	chr7	protein_coding	CD151 antigen
chr7	141047497	141049168	+	141048809	141049168	5pMXE	0.25	50	50	ENSMUST00000058746.7	ENSMUSG00000025510.15	Cd151	chr7	protein_coding	CD151 antigen
chr7	141055473	141062400	+	141055410	141062400	A5SS	0.2	50	50	ENSMUST00000026585.14	ENSMUSG00000025511.16	Tspan4	chr7	protein_coding	tetraspanin 4
chr7	141055664	141062400	+	141055410	141062400	A5SS	0.2	50	50	ENSMUST00000026585.14	ENSMUSG00000025511.16	Tspan4	chr7	protein_coding	tetraspanin 4
chr7	141055872	141062400	+	141055410	141062400	A5SS	0.2	50	50	ENSMUST00000026585.14	ENSMUSG00000025511.16	Tspan4	chr7	protein_coding	tetraspanin 4
chr7	141056391	141062400	+	141055410	141062400	A5SS	0.2	50	50	ENSMUST00000026585.14	ENSMUSG00000025511.16	Tspan4	chr7	protein_coding	tetraspanin 4
chr7	141055664	141062400	+	141055473	141062400	A5SS	0.2	50	50	ENSMUST00000138092.8	ENSMUSG00000025511.16	Tspan4	chr7	protein_coding	tetraspanin 4
chr7	141055872	141062400	+	141055473	141062400	A5SS	0.2	50	50	ENSMUST00000138092.8	ENSMUSG00000025511.16	Tspan4	chr7	protein_coding	tetraspanin 4
chr7	141056391	141062400	+	141055473	141062400	A5SS	0.2	50	50	ENSMUST00000138092.8	ENSMUSG00000025511.16	Tspan4	chr7	protein_coding	tetraspanin 4
chr7	141055872	141062400	+	141055664	141062400	A5SS	0.2	50	50	ENSMUST00000146305.8	ENSMUSG00000025511.16	Tspan4	chr7	protein_coding	tetraspanin 4
chr7	141056391	141062400	+	141055664	141062400	A5SS	0.2	50	50	ENSMUST00000146305.8	ENSMUSG00000025511.16	Tspan4	chr7	protein_coding	tetraspanin 4
chr7	141056391	141062400	+	141055872	141062400	A5SS	0.2	50	50	ENSMUST00000140858.8	ENSMUSG00000025511.16	Tspan4	chr7	protein_coding	tetraspanin 4
chr7	141102614	141107512	-	141102614;141106406	141106345;141107512	ES	0.5	50	50	ENSMUST00000153191.8	ENSMUSG00000025512.16	Chid1	chr7	protein_coding	chitinase domain containing 1
chr7	141076594;141081508	141081453;141093647	-	141076594	141093647	cassetteExon	0.5	100	100	ENSMUST00000153191.8	ENSMUSG00000025512.16	Chid1	chr7	protein_coding	chitinase domain containing 1
chr7	141090498	141093647	-	141076594	141093647	A3SS	0.25	50	50	ENSMUST00000153191.8	ENSMUSG00000025512.16	Chid1	chr7	protein_coding	chitinase domain containing 1
chr7	141091952	141093647	-	141076594	141093647	A3SS	0.25	50	50	ENSMUST00000153191.8	ENSMUSG00000025512.16	Chid1	chr7	protein_coding	chitinase domain containing 1
chr7	141101013	141102522	-	141095416	141102522	A3SS	0.33	50	50	ENSMUST00000153191.8	ENSMUSG00000025512.16	Chid1	chr7	protein_coding	chitinase domain containing 1
chr7	141076594	141077315	-	141076594	141093647	A5SS	0.25	50	50	ENSMUST00000153191.8	ENSMUSG00000025512.16	Chid1	chr7	protein_coding	chitinase domain containing 1
chr7	141095416	141099867	-	141095416	141102522	A5SS	0.5	50	50	ENSMUST00000153191.8	ENSMUSG00000025512.16	Chid1	chr7	protein_coding	chitinase domain containing 1
chr7	141112886	141119389	-	141112886	141119686	A5SS	0.5	50	50	ENSMUST00000153191.8	ENSMUSG00000025512.16	Chid1	chr7	protein_coding	chitinase domain containing 1
chr7	141095416	141102522	-	141076594	141102522	A3SS	0.33	50	50	ENSMUST00000026586.13	ENSMUSG00000025512.16	Chid1	chr7	protein_coding	chitinase domain containing 1
chr7	141101013	141102522	-	141076594	141102522	A3SS	0.33	50	50	ENSMUST00000026586.13	ENSMUSG00000025512.16	Chid1	chr7	protein_coding	chitinase domain containing 1
chr7	141076594	141077315	-	141076594	141102522	A5SS	0.25	50	50	ENSMUST00000026586.13	ENSMUSG00000025512.16	Chid1	chr7	protein_coding	chitinase domain containing 1
chr7	141076594	141081453	-	141076594	141102522	A5SS	0.25	50	50	ENSMUST00000026586.13	ENSMUSG00000025512.16	Chid1	chr7	protein_coding	chitinase domain containing 1
chr7	141076594	141093647	-	141076594	141102522	A5SS	0.25	50	50	ENSMUST00000026586.13	ENSMUSG00000025512.16	Chid1	chr7	protein_coding	chitinase domain containing 1
chr7	141090498	141093647	-	141081508	141093647	A3SS	0.25	50	50	ENSMUST00000209452.2	ENSMUSG00000025512.16	Chid1	chr7	protein_coding	chitinase domain containing 1
chr7	141091952	141093647	-	141081508	141093647	A3SS	0.25	50	50	ENSMUST00000209452.2	ENSMUSG00000025512.16	Chid1	chr7	protein_coding	chitinase domain containing 1
chr7	141076594	141077315	-	141076594	141081453	A5SS	0.25	50	50	ENSMUST00000209452.2	ENSMUSG00000025512.16	Chid1	chr7	protein_coding	chitinase domain containing 1
chr7	141076594;141081508	141081453;141093647	-	141076594;141090498	141077315;141093647	MXE	0.5	100	100	ENSMUST00000064642.12	ENSMUSG00000025512.16	Chid1	chr7	protein_coding	chitinase domain containing 1
chr7	141091952	141093647	-	141090498	141093647	A3SS	0.25	50	50	ENSMUST00000064642.12	ENSMUSG00000025512.16	Chid1	chr7	protein_coding	chitinase domain containing 1
chr7	141102614	141107512	-	141102614	141106345	5pMXE	0.5	50	50	ENSMUST00000155305.2	ENSMUSG00000025512.16	Chid1	chr7	protein_coding	chitinase domain containing 1
chr7	141142665	141168199	+	141142339	141168199	A5SS	0.5	50	50	ENSMUST00000003038.12	ENSMUSG00000002957.12	Ap2a2	chr7	protein_coding	adaptor-related protein complex 2, alpha 2 subunit
chr7	141347447	141347638	+	141347450	141347638	A5SS	0.5	50	50	ENSMUST00000155534.9	ENSMUSG00000037974.17	Muc5ac	chr7	protein_coding	mucin 5, subtypes A and C, tracheobronchial/gastric
chr7	141446626	141472172	-	141446626	141456013	5pMXE	0.33	50	50	ENSMUST00000055819.13	ENSMUSG00000025139.15	Tollip	chr7	protein_coding	toll interacting protein
chr7	141446626;141452520	141452432;141456013	-	141446626	141456013	cassetteExon	0.5	100	100	ENSMUST00000055819.13	ENSMUSG00000025139.15	Tollip	chr7	protein_coding	toll interacting protein
chr7	141438318	141443244	-	141428932	141443244	A3SS	0.5	50	50	ENSMUST00000055819.13	ENSMUSG00000025139.15	Tollip	chr7	protein_coding	toll interacting protein
chr7	141446626	141452432	-	141446626	141472172	A5SS	0.33	50	50	ENSMUST00000151890.3	ENSMUSG00000025139.15	Tollip	chr7	protein_coding	toll interacting protein
chr7	141539769	141541488	+	141539769;141541190	141541159;141541488	ES	0.5	50	50	ENSMUST00000078200.12	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141552295	141552657	+	141552295;141552459	141552370;141552657	ES	0.5	50	50	ENSMUST00000078200.12	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141552459	141554579	+	141552459	141552657	3pMXE	0.25	50	50	ENSMUST00000078200.12	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141552459	141555800	+	141552459	141552657	3pMXE	0.25	50	50	ENSMUST00000078200.12	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141552459	141556212	+	141552459	141552657	3pMXE	0.25	50	50	ENSMUST00000078200.12	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141542173;141544150	141544085;141545977	+	141542173	141545977	cassetteExon	0.5	100	100	ENSMUST00000078200.12	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141536807	141538131	+	141536803	141538131	A5SS	0.5	50	50	ENSMUST00000078200.12	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141539670	141541159	+	141539769	141541159	A5SS	0.5	50	50	ENSMUST00000078200.12	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141551378	141552115	+	141550749	141552115	A5SS	0.5	50	50	ENSMUST00000078200.12	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141552295;141552751	141552657;141556212	+	141552295;141552459	141552370;141556212	MXE	0.5	100	100	ENSMUST00000018971.15	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141552459;141552751	141552657;141556212	+	141552459	141556212	cassetteExon	0.5	100	100	ENSMUST00000018971.15	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141552459;141554623	141554579;141556212	+	141552459	141556212	cassetteExon	0.5	100	100	ENSMUST00000018971.15	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141552459;141554626	141554579;141556212	+	141552459	141556212	cassetteExon	0.5	100	100	ENSMUST00000018971.15	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141552459	141555800	+	141552459	141556212	A3SS	0.25	50	50	ENSMUST00000018971.15	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141552459;141554623	141554579;141556212	+	141552459;141552751	141552657;141556212	MXE	0.5	100	100	ENSMUST00000174405.8	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141552459;141554626	141554579;141556212	+	141552459;141552751	141552657;141556212	MXE	0.5	100	100	ENSMUST00000174405.8	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141552751;141554623	141554579;141556212	+	141552751	141556212	cassetteExon	0.5	100	100	ENSMUST00000174405.8	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141552751;141554626	141554579;141556212	+	141552751	141556212	cassetteExon	0.5	100	100	ENSMUST00000174405.8	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141552459	141554579	+	141552459;141552751	141552657;141554579	ES	0.5	50	50	ENSMUST00000105989.9	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141552751	141556212	+	141552751	141554579	3pMXE	0.5	50	50	ENSMUST00000105989.9	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141552459	141555800	+	141552459;141554626	141554579;141555800	ES	0.5	50	50	ENSMUST00000075528.12	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141554626	141556212	+	141554626	141555800	3pMXE	0.25	50	50	ENSMUST00000075528.12	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141554626	141557730	+	141554626	141555800	3pMXE	0.25	50	50	ENSMUST00000075528.12	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141552295;141552751	141552657;141554579	+	141552295;141552459	141552370;141554579	MXE	0.5	100	100	ENSMUST00000075528.12	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141554626	141555752	+	141554626	141555800	A3SS	0.25	50	50	ENSMUST00000075528.12	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141552459	141555800	+	141552459	141554579	A3SS&ES	0.25	50	50	ENSMUST00000174499.8	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141552459	141556212	+	141552459	141554579	A3SS&ES	0.25	50	50	ENSMUST00000174499.8	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141554626	141556212	+	141554626	141555752	A3SS	0.25	50	50	ENSMUST00000174499.8	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141554626	141557730	+	141554626	141555752	A3SS	0.25	50	50	ENSMUST00000174499.8	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141552295;141552459	141552370;141555800	+	141552295;141554626	141552657;141555800	MXE	0.5	100	100	ENSMUST00000172967.8	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141539769	141541488	+	141541190	141541488	A5SS&ES	0.5	50	50	ENSMUST00000173924.8	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141554626	141557730	+	141554626	141556212	3pMXE	0.25	50	50	ENSMUST00000173705.8	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141554623	141556212	+	141554626	141556212	A5SS	0.25	50	50	ENSMUST00000173705.8	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141552295	141552657	+	141552295	141552370	A3SS&ES	0.5	50	50	ENSMUST00000174237.8	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141552295;141552751	141552657;141556212	+	141552295;141554623	141552370;141556212	MXE	0.5	100	100	ENSMUST00000173313.3	ENSMUSG00000053046.17	Brsk2	chr7	protein_coding	BR serine/threonine kinase 2
chr7	141570242	141614722	-	141570242;141587029	141586873;141614722	ES	0.25	50	50	ENSMUST00000211000.2	ENSMUSG00000025147.8	Mob2	chr7	protein_coding	MOB kinase activator 2
chr7	141570242;141578213	141578011;141614722	-	141570242;141587029	141586873;141614722	MXE	0.5	100	100	ENSMUST00000211000.2	ENSMUSG00000025147.8	Mob2	chr7	protein_coding	MOB kinase activator 2
chr7	141570242;141579694	141579567;141614722	-	141570242;141587029	141586873;141614722	MXE	0.5	100	100	ENSMUST00000211000.2	ENSMUSG00000025147.8	Mob2	chr7	protein_coding	MOB kinase activator 2
chr7	141569909	141570131	-	141569909	141570082	A5SS	0.5	50	50	ENSMUST00000211000.2	ENSMUSG00000025147.8	Mob2	chr7	protein_coding	MOB kinase activator 2
chr7	141570242	141613874	-	141570242	141586873	A5SS&ES	0.2	50	50	ENSMUST00000211000.2	ENSMUSG00000025147.8	Mob2	chr7	protein_coding	MOB kinase activator 2
chr7	141570242	141614722	-	141570242	141613874	5pMXE	0.2	50	50	ENSMUST00000211206.2	ENSMUSG00000025147.8	Mob2	chr7	protein_coding	MOB kinase activator 2
chr7	141570242	141578011	-	141570242	141613874	A5SS	0.2	50	50	ENSMUST00000211206.2	ENSMUSG00000025147.8	Mob2	chr7	protein_coding	MOB kinase activator 2
chr7	141570242	141579567	-	141570242	141613874	A5SS	0.2	50	50	ENSMUST00000211206.2	ENSMUSG00000025147.8	Mob2	chr7	protein_coding	MOB kinase activator 2
chr7	141570242;141578213	141578011;141614722	-	141570242	141614722	cassetteExon	0.5	100	100	ENSMUST00000084418.4	ENSMUSG00000025147.8	Mob2	chr7	protein_coding	MOB kinase activator 2
chr7	141570242;141579694	141579567;141614722	-	141570242	141614722	cassetteExon	0.5	100	100	ENSMUST00000084418.4	ENSMUSG00000025147.8	Mob2	chr7	protein_coding	MOB kinase activator 2
chr7	141570242	141586873	-	141570242	141579567	5pMXE	0.2	50	50	ENSMUST00000209732.2	ENSMUSG00000025147.8	Mob2	chr7	protein_coding	MOB kinase activator 2
chr7	141570242	141614722	-	141570242	141579567	5pMXE	0.2	50	50	ENSMUST00000209732.2	ENSMUSG00000025147.8	Mob2	chr7	protein_coding	MOB kinase activator 2
chr7	141570242	141578011	-	141570242	141579567	A5SS	0.2	50	50	ENSMUST00000209732.2	ENSMUSG00000025147.8	Mob2	chr7	protein_coding	MOB kinase activator 2
chr7	141570242;141578213	141578011;141614722	-	141570242;141579694	141579567;141614722	MXE	0.5	100	100	ENSMUST00000209725.2	ENSMUSG00000025147.8	Mob2	chr7	protein_coding	MOB kinase activator 2
chr7	141644003	141649515	-	141644003	141648660	5pMXE	0.5	50	50	ENSMUST00000039926.10	ENSMUSG00000037887.12	Dusp8	chr7	protein_coding	dual specificity phosphatase 8
chr7	141882428	141904147	-	141882428	141891642	5pMXE	0.5	50	50	ENSMUST00000131791.2	ENSMUSG00000045777.15	Ifitm10	chr7	protein_coding	interferon induced transmembrane protein 10
chr7	141904243	141925899	-	141904243;141925047	141924595;141925899	ES	0.5	50	50	ENSMUST00000059223.15	ENSMUSG00000045777.15	Ifitm10	chr7	protein_coding	interferon induced transmembrane protein 10
chr7	141925047	141926418	-	141925047	141925899	5pMXE	0.2	50	50	ENSMUST00000059223.15	ENSMUSG00000045777.15	Ifitm10	chr7	protein_coding	interferon induced transmembrane protein 10
chr7	141925047	141927313	-	141925047	141925899	5pMXE	0.2	50	50	ENSMUST00000059223.15	ENSMUSG00000045777.15	Ifitm10	chr7	protein_coding	interferon induced transmembrane protein 10
chr7	141925047	141930338	-	141925047	141925899	5pMXE	0.2	50	50	ENSMUST00000059223.15	ENSMUSG00000045777.15	Ifitm10	chr7	protein_coding	interferon induced transmembrane protein 10
chr7	141925047	141930570	-	141925047	141925899	5pMXE	0.2	50	50	ENSMUST00000059223.15	ENSMUSG00000045777.15	Ifitm10	chr7	protein_coding	interferon induced transmembrane protein 10
chr7	141909851	141924595	-	141904243	141924595	A3SS	0.5	50	50	ENSMUST00000059223.15	ENSMUSG00000045777.15	Ifitm10	chr7	protein_coding	interferon induced transmembrane protein 10
chr7	141925047	141930338	-	141925047	141927313	5pMXE	0.2	50	50	ENSMUST00000105988.2	ENSMUSG00000045777.15	Ifitm10	chr7	protein_coding	interferon induced transmembrane protein 10
chr7	141925047	141930570	-	141925047	141927313	5pMXE	0.2	50	50	ENSMUST00000105988.2	ENSMUSG00000045777.15	Ifitm10	chr7	protein_coding	interferon induced transmembrane protein 10
chr7	141925047	141926418	-	141925047	141927313	A5SS	0.2	50	50	ENSMUST00000105988.2	ENSMUSG00000045777.15	Ifitm10	chr7	protein_coding	interferon induced transmembrane protein 10
chr7	141925047	141930338	-	141925047	141926418	5pMXE	0.2	50	50	ENSMUST00000123543.2	ENSMUSG00000045777.15	Ifitm10	chr7	protein_coding	interferon induced transmembrane protein 10
chr7	141925047	141930570	-	141925047	141926418	5pMXE	0.2	50	50	ENSMUST00000123543.2	ENSMUSG00000045777.15	Ifitm10	chr7	protein_coding	interferon induced transmembrane protein 10
chr7	141925047	141930570	-	141925047;141930475	141930338;141930570	ES	0.5	50	50	ENSMUST00000209263.2	ENSMUSG00000110040.2	Gm49369	chr7	protein_coding	predicted gene, 49369
chr7	141930907	141931088	-	141930907	141931070	A5SS	0.5	50	50	ENSMUST00000209263.2	ENSMUSG00000110040.2	Gm49369	chr7	protein_coding	predicted gene, 49369
chr7	141925047	141930570	-	141930475	141930570	3pMXE	0.5	50	50	ENSMUST00000151120.9	ENSMUSG00000007891.17	Ctsd	chr7	protein_coding	cathepsin D
chr7	141993258;141993502	141993397;141993588	+	141993258	141993588	cassetteExon	0.5	100	100	ENSMUST00000150192.8	ENSMUSG00000031098.19	Syt8	chr7	protein_coding	synaptotagmin VIII
chr7	141988818	141992631	+	141988638	141992631	A5SS	0.25	50	50	ENSMUST00000150192.8	ENSMUSG00000031098.19	Syt8	chr7	protein_coding	synaptotagmin VIII
chr7	141988829	141992631	+	141988638	141992631	A5SS	0.25	50	50	ENSMUST00000150192.8	ENSMUSG00000031098.19	Syt8	chr7	protein_coding	synaptotagmin VIII
chr7	141992281	141992631	+	141988638	141992631	A5SS	0.25	50	50	ENSMUST00000150192.8	ENSMUSG00000031098.19	Syt8	chr7	protein_coding	synaptotagmin VIII
chr7	141988818;141992281	141991900;141992631	+	141988818	141992631	cassetteExon	0.5	100	100	ENSMUST00000128481.2	ENSMUSG00000031098.19	Syt8	chr7	protein_coding	synaptotagmin VIII
chr7	141988829	141992631	+	141988818	141992631	A5SS	0.25	50	50	ENSMUST00000128481.2	ENSMUSG00000031098.19	Syt8	chr7	protein_coding	synaptotagmin VIII
chr7	141988829	141991900	+	141988829	141991807	A3SS	0.33	50	50	ENSMUST00000118276.8	ENSMUSG00000031098.19	Syt8	chr7	protein_coding	synaptotagmin VIII
chr7	141992010	141992112	+	141992010	141992094	A3SS	0.5	50	50	ENSMUST00000118276.8	ENSMUSG00000031098.19	Syt8	chr7	protein_coding	synaptotagmin VIII
chr7	141988818	141992631	+	141992281	141992631	A5SS&ES	0.33	50	50	ENSMUST00000118276.8	ENSMUSG00000031098.19	Syt8	chr7	protein_coding	synaptotagmin VIII
chr7	141988829	141991900	+	141988818	141991900	A5SS	0.33	50	50	ENSMUST00000105976.8	ENSMUSG00000031098.19	Syt8	chr7	protein_coding	synaptotagmin VIII
chr7	141988829	141992631	+	141992281	141992631	A5SS&ES	0.33	50	50	ENSMUST00000105976.8	ENSMUSG00000031098.19	Syt8	chr7	protein_coding	synaptotagmin VIII
chr7	141990676	141991900	+	141988818	141991900	A5SS	0.33	50	50	ENSMUST00000105976.8	ENSMUSG00000031098.19	Syt8	chr7	protein_coding	synaptotagmin VIII
chr7	141990676	141991900	+	141988829	141991900	A5SS	0.33	50	50	ENSMUST00000097939.9	ENSMUSG00000031098.19	Syt8	chr7	protein_coding	synaptotagmin VIII
chr7	141988829;141992281	141991807;141992631	+	141988829	141992631	cassetteExon	0.5	100	100	ENSMUST00000148896.8	ENSMUSG00000031098.19	Syt8	chr7	protein_coding	synaptotagmin VIII
chr7	141988829;141992281	141991900;141992631	+	141988829	141992631	cassetteExon	0.5	100	100	ENSMUST00000148896.8	ENSMUSG00000031098.19	Syt8	chr7	protein_coding	synaptotagmin VIII
chr7	141996949	141997055	+	141996949	141997040	A3SS	0.5	50	50	ENSMUST00000105971.8	ENSMUSG00000031097.16	Tnni2	chr7	protein_coding	troponin I, skeletal, fast 2
chr7	141997168	141997269	+	141997168	141997308	A3SS	0.5	50	50	ENSMUST00000105971.8	ENSMUSG00000031097.16	Tnni2	chr7	protein_coding	troponin I, skeletal, fast 2
chr7	141995630	141996206	+	141995605	141996206	A5SS	0.5	50	50	ENSMUST00000105971.8	ENSMUSG00000031097.16	Tnni2	chr7	protein_coding	troponin I, skeletal, fast 2
chr7	141997565	141997643	+	141997397	141997643	A5SS	0.5	50	50	ENSMUST00000105971.8	ENSMUSG00000031097.16	Tnni2	chr7	protein_coding	troponin I, skeletal, fast 2
chr7	142042252	142042603	+	142042252	142042585	A3SS	0.5	50	50	ENSMUST00000105968.8	ENSMUSG00000018819.11	Lsp1	chr7	protein_coding	lymphocyte specific 1
chr7	142044402	142047973	+	142044402	142047978	A3SS	0.5	50	50	ENSMUST00000105968.8	ENSMUSG00000018819.11	Lsp1	chr7	protein_coding	lymphocyte specific 1
chr7	142026101	142038216	+	142014703	142038216	A5SS	0.16	50	50	ENSMUST00000105968.8	ENSMUSG00000018819.11	Lsp1	chr7	protein_coding	lymphocyte specific 1
chr7	142029154	142038216	+	142014703	142038216	A5SS	0.16	50	50	ENSMUST00000105968.8	ENSMUSG00000018819.11	Lsp1	chr7	protein_coding	lymphocyte specific 1
chr7	142031103	142038216	+	142014703	142038216	A5SS	0.16	50	50	ENSMUST00000105968.8	ENSMUSG00000018819.11	Lsp1	chr7	protein_coding	lymphocyte specific 1
chr7	142037028	142038216	+	142014703	142038216	A5SS	0.16	50	50	ENSMUST00000105968.8	ENSMUSG00000018819.11	Lsp1	chr7	protein_coding	lymphocyte specific 1
chr7	142037184	142038216	+	142014703	142038216	A5SS	0.16	50	50	ENSMUST00000105968.8	ENSMUSG00000018819.11	Lsp1	chr7	protein_coding	lymphocyte specific 1
chr7	142029154	142038216	+	142026101	142038216	A5SS	0.16	50	50	ENSMUST00000038946.9	ENSMUSG00000018819.11	Lsp1	chr7	protein_coding	lymphocyte specific 1
chr7	142031103	142038216	+	142026101	142038216	A5SS	0.16	50	50	ENSMUST00000038946.9	ENSMUSG00000018819.11	Lsp1	chr7	protein_coding	lymphocyte specific 1
chr7	142037028	142038216	+	142026101	142038216	A5SS	0.16	50	50	ENSMUST00000038946.9	ENSMUSG00000018819.11	Lsp1	chr7	protein_coding	lymphocyte specific 1
chr7	142037184	142038216	+	142026101	142038216	A5SS	0.16	50	50	ENSMUST00000038946.9	ENSMUSG00000018819.11	Lsp1	chr7	protein_coding	lymphocyte specific 1
chr7	142031103	142038216	+	142029154	142038216	A5SS	0.16	50	50	ENSMUST00000132956.8	ENSMUSG00000018819.11	Lsp1	chr7	protein_coding	lymphocyte specific 1
chr7	142037028	142038216	+	142029154	142038216	A5SS	0.16	50	50	ENSMUST00000132956.8	ENSMUSG00000018819.11	Lsp1	chr7	protein_coding	lymphocyte specific 1
chr7	142037184	142038216	+	142029154	142038216	A5SS	0.16	50	50	ENSMUST00000132956.8	ENSMUSG00000018819.11	Lsp1	chr7	protein_coding	lymphocyte specific 1
chr7	142037028	142038216	+	142031103	142038216	A5SS	0.16	50	50	ENSMUST00000149521.8	ENSMUSG00000018819.11	Lsp1	chr7	protein_coding	lymphocyte specific 1
chr7	142037184	142038216	+	142031103	142038216	A5SS	0.16	50	50	ENSMUST00000149521.8	ENSMUSG00000018819.11	Lsp1	chr7	protein_coding	lymphocyte specific 1
chr7	142037184	142038216	+	142037028	142038216	A5SS	0.16	50	50	ENSMUST00000140626.8	ENSMUSG00000018819.11	Lsp1	chr7	protein_coding	lymphocyte specific 1
chr7	142046872;142050708	142050612;142060174	-	142046872	142060174	cassetteExon	0.5	100	100	ENSMUST00000054910.9	ENSMUSG00000043795.11	Prr33	chr7	protein_coding	proline rich 33
chr7	142046872	142060174	-	142046872	142050612	5pMXE	0.5	50	50	ENSMUST00000238347.2	ENSMUSG00000043795.11	Prr33	chr7	protein_coding	proline rich 33
chr7	142055579	142057785	+	142055579;142056494	142056477;142057785	ES	0.5	50	50	ENSMUST00000078497.15	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142057802	142059253	+	142057802;142058001	142057987;142059253	ES	0.33	50	50	ENSMUST00000078497.15	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142059267	142062072	+	142059267;142061525	142061487;142062072	ES	0.2	50	50	ENSMUST00000078497.15	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142066359	142069513	+	142066359;142068103	142068063;142069513	ES	0.33	50	50	ENSMUST00000078497.15	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142058001;142059036	142059025;142059253	+	142058001	142059253	cassetteExon	0.5	100	100	ENSMUST00000078497.15	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142058001;142059036	142059025;142062072	+	142058001;142061525	142059253;142062072	MXE	0.5	100	100	ENSMUST00000078497.15	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142061525;142061600	142061582;142064401	+	142061525;142062090	142062072;142064401	MXE	0.5	100	100	ENSMUST00000078497.15	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142066359;142067442	142067402;142069513	+	142066359;142068103	142068063;142069513	MXE	0.5	100	100	ENSMUST00000078497.15	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142058001	142058428	+	142058001	142059253	A3SS	0.33	50	50	ENSMUST00000078497.15	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142061544	142064401	+	142062090	142064401	A5SS&ES	0.33	50	50	ENSMUST00000078497.15	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142055579;142056494	142056477;142062072	+	142055579;142061525	142057785;142062072	MXE	0.5	100	100	ENSMUST00000105953.10	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142066359;142067442	142067402;142069513	+	142066359	142069513	cassetteExon	0.5	100	100	ENSMUST00000125649.8	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142059036	142059253	+	142057802	142059253	A5SS	0.33	50	50	ENSMUST00000125649.8	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142059036	142062072	+	142061525	142062072	A5SS&ES	0.2	50	50	ENSMUST00000125649.8	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142058001	142058428	+	142058001	142059025	A3SS	0.33	50	50	ENSMUST00000179658.8	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142059036	142062072	+	142059036;142059267	142059253;142062072	ES	0.2	50	50	ENSMUST00000105952.10	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142059267;142061544	142061487;142064401	+	142059267;142062090	142062072;142064401	MXE	0.5	100	100	ENSMUST00000105952.10	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142059267;142061600	142061487;142064401	+	142059267;142062090	142062072;142064401	MXE	0.5	100	100	ENSMUST00000105952.10	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142058001;142059036	142059025;142062072	+	142058001;142059267	142059253;142062072	MXE	0.5	100	100	ENSMUST00000105955.8	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142055579;142056494	142056477;142062072	+	142055579;142059036	142057785;142062072	MXE	0.5	100	100	ENSMUST00000074187.13	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142057802;142059267	142059253;142062072	+	142057802;142059036	142057987;142062072	MXE	0.5	100	100	ENSMUST00000074187.13	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142061600	142064401	+	142062090	142064401	A5SS&ES	0.33	50	50	ENSMUST00000074187.13	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142056494;142062090	142062072;142064401	+	142056494;142061544	142057785;142064401	MXE	0.5	100	100	ENSMUST00000105957.10	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142057802;142062090	142062072;142064401	+	142057802;142061544	142057987;142064401	MXE	0.5	100	100	ENSMUST00000105957.10	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142057802	142059253	+	142057802	142057987	A3SS&ES	0.33	50	50	ENSMUST00000105957.10	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142061600	142064401	+	142061544	142064401	A5SS	0.33	50	50	ENSMUST00000105957.10	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142056494;142062090	142062072;142064401	+	142056494;142061600	142057785;142064401	MXE	0.5	100	100	ENSMUST00000180152.8	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142057802;142062090	142062072;142064401	+	142057802;142061600	142057987;142064401	MXE	0.5	100	100	ENSMUST00000180152.8	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142059036;142062090	142062072;142064401	+	142059036;142061600	142059253;142064401	MXE	0.5	100	100	ENSMUST00000180152.8	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142058001	142059253	+	142058001	142059025	3pMXE	0.33	50	50	ENSMUST00000209807.2	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142057802	142062072	+	142057802;142059267	142059253;142062072	ES	0.2	50	50	ENSMUST00000105949.8	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142055579;142056494	142056477;142062072	+	142055579;142059267	142057785;142062072	MXE	0.5	100	100	ENSMUST00000105949.8	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142059036	142062072	+	142059267	142062072	A5SS&ES	0.2	50	50	ENSMUST00000105949.8	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142056494	142062072	+	142056494;142057802	142057785;142062072	ES	0.2	50	50	ENSMUST00000128294.8	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142057802	142057987	+	142057802	142062072	A3SS	0.33	50	50	ENSMUST00000128294.8	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142059036	142062072	+	142057802	142062072	A5SS	0.2	50	50	ENSMUST00000128294.8	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142061525	142062072	+	142057802	142062072	A5SS	0.2	50	50	ENSMUST00000128294.8	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142055579;142057802	142057785;142062072	+	142055579;142056494	142056477;142062072	MXE	0.5	100	100	ENSMUST00000146804.8	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142059036	142062072	+	142056494	142062072	A5SS	0.2	50	50	ENSMUST00000146804.8	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142059267	142062072	+	142056494	142062072	A5SS	0.2	50	50	ENSMUST00000146804.8	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142061525	142062072	+	142056494	142062072	A5SS	0.2	50	50	ENSMUST00000146804.8	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142066359	142069513	+	142068103	142069513	5pMXE	0.33	50	50	ENSMUST00000144259.2	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142067442	142069513	+	142068103	142069513	5pMXE	0.33	50	50	ENSMUST00000144259.2	ENSMUSG00000061723.19	Tnnt3	chr7	protein_coding	troponin T3, skeletal, fast
chr7	142086931	142088742	+	142086567	142088742	A5SS	0.25	50	50	ENSMUST00000137345.9	ENSMUSG00000037772.14	Mrpl23	chr7	protein_coding	mitochondrial ribosomal protein L23
chr7	142086978	142088742	+	142086567	142088742	A5SS	0.25	50	50	ENSMUST00000137345.9	ENSMUSG00000037772.14	Mrpl23	chr7	protein_coding	mitochondrial ribosomal protein L23
chr7	142087745	142088742	+	142086567	142088742	A5SS	0.25	50	50	ENSMUST00000137345.9	ENSMUSG00000037772.14	Mrpl23	chr7	protein_coding	mitochondrial ribosomal protein L23
chr7	142086978	142088742	+	142086931	142088742	A5SS	0.25	50	50	ENSMUST00000038675.7	ENSMUSG00000037772.14	Mrpl23	chr7	protein_coding	mitochondrial ribosomal protein L23
chr7	142087745	142088742	+	142086931	142088742	A5SS	0.25	50	50	ENSMUST00000038675.7	ENSMUSG00000037772.14	Mrpl23	chr7	protein_coding	mitochondrial ribosomal protein L23
chr7	142087745	142088742	+	142086978	142088742	A5SS	0.25	50	50	ENSMUST00000210803.2	ENSMUSG00000037772.14	Mrpl23	chr7	protein_coding	mitochondrial ribosomal protein L23
chr7	142130480	142130566	-	142130484	142130566	A3SS	0.5	50	50	ENSMUST00000136359.8	ENSMUSG00000000031.17	H19	chr7	lncRNA	H19, imprinted maternally expressed transcript
chr7	142209553	142212101	-	142209553	142211125	5pMXE	0.16	50	50	ENSMUST00000000033.12	ENSMUSG00000048583.17	Igf2	chr7	protein_coding	insulin-like growth factor 2
chr7	142209553	142214669	-	142209553	142211125	5pMXE	0.16	50	50	ENSMUST00000000033.12	ENSMUSG00000048583.17	Igf2	chr7	protein_coding	insulin-like growth factor 2
chr7	142209553	142215548	-	142209553	142211125	5pMXE	0.16	50	50	ENSMUST00000000033.12	ENSMUSG00000048583.17	Igf2	chr7	protein_coding	insulin-like growth factor 2
chr7	142209553	142220513	-	142209553	142211125	5pMXE	0.16	50	50	ENSMUST00000000033.12	ENSMUSG00000048583.17	Igf2	chr7	protein_coding	insulin-like growth factor 2
chr7	142209553	142221230	-	142209553	142211125	5pMXE	0.16	50	50	ENSMUST00000000033.12	ENSMUSG00000048583.17	Igf2	chr7	protein_coding	insulin-like growth factor 2
chr7	142205361	142206592	-	142205361	142205421	A5SS&ES	0.5	50	50	ENSMUST00000097936.9	ENSMUSG00000048583.17	Igf2	chr7	protein_coding	insulin-like growth factor 2
chr7	142209553	142214669	-	142209553	142212101	5pMXE	0.16	50	50	ENSMUST00000121128.8	ENSMUSG00000048583.17	Igf2	chr7	protein_coding	insulin-like growth factor 2
chr7	142209553	142215548	-	142209553	142212101	5pMXE	0.16	50	50	ENSMUST00000121128.8	ENSMUSG00000048583.17	Igf2	chr7	protein_coding	insulin-like growth factor 2
chr7	142209553	142220513	-	142209553	142212101	5pMXE	0.16	50	50	ENSMUST00000121128.8	ENSMUSG00000048583.17	Igf2	chr7	protein_coding	insulin-like growth factor 2
chr7	142209553	142221230	-	142209553	142212101	5pMXE	0.16	50	50	ENSMUST00000121128.8	ENSMUSG00000048583.17	Igf2	chr7	protein_coding	insulin-like growth factor 2
chr7	142209553	142215548	-	142209553	142214669	5pMXE	0.16	50	50	ENSMUST00000105936.8	ENSMUSG00000048583.17	Igf2	chr7	protein_coding	insulin-like growth factor 2
chr7	142209553	142220513	-	142209553	142214669	5pMXE	0.16	50	50	ENSMUST00000105936.8	ENSMUSG00000048583.17	Igf2	chr7	protein_coding	insulin-like growth factor 2
chr7	142209553	142221230	-	142209553	142214669	5pMXE	0.16	50	50	ENSMUST00000105936.8	ENSMUSG00000048583.17	Igf2	chr7	protein_coding	insulin-like growth factor 2
chr7	142209553	142221230	-	142209553	142220513	5pMXE	0.16	50	50	ENSMUST00000105935.8	ENSMUSG00000048583.17	Igf2	chr7	protein_coding	insulin-like growth factor 2
chr7	142209553	142215548	-	142209553	142220513	A5SS	0.16	50	50	ENSMUST00000105935.8	ENSMUSG00000048583.17	Igf2	chr7	protein_coding	insulin-like growth factor 2
chr7	142209553	142221230	-	142209553	142215548	5pMXE	0.16	50	50	ENSMUST00000145896.3	ENSMUSG00000048583.17	Igf2	chr7	protein_coding	insulin-like growth factor 2
chr7	142218920	142219259	+	142214766	142219259	A5SS	0.5	50	50	ENSMUST00000141681.2	ENSMUSG00000086266.2	Igf2os	chr7	lncRNA	insulin-like growth factor 2, opposite strand
chr7	142233284	142253172	-	142233284	142233399	5pMXE	0.5	50	50	ENSMUST00000105931.8	ENSMUSG00000000215.12	Ins2	chr7	protein_coding	insulin II
chr7	142232470	142233084	-	142232639	142233084	A3SS	0.2	50	50	ENSMUST00000105931.8	ENSMUSG00000000215.12	Ins2	chr7	protein_coding	insulin II
chr7	142232559	142233084	-	142232639	142233084	A3SS	0.2	50	50	ENSMUST00000105931.8	ENSMUSG00000000215.12	Ins2	chr7	protein_coding	insulin II
chr7	142232595	142233084	-	142232639	142233084	A3SS	0.2	50	50	ENSMUST00000105931.8	ENSMUSG00000000215.12	Ins2	chr7	protein_coding	insulin II
chr7	142232746	142233084	-	142232639	142233084	A3SS	0.2	50	50	ENSMUST00000105931.8	ENSMUSG00000000215.12	Ins2	chr7	protein_coding	insulin II
chr7	142233296	142233399	-	142233284	142233399	A3SS	0.5	50	50	ENSMUST00000105931.8	ENSMUSG00000000215.12	Ins2	chr7	protein_coding	insulin II
chr7	142232470	142233084	-	142232595	142233084	A3SS	0.2	50	50	ENSMUST00000105934.8	ENSMUSG00000000215.12	Ins2	chr7	protein_coding	insulin II
chr7	142232559	142233084	-	142232595	142233084	A3SS	0.2	50	50	ENSMUST00000105934.8	ENSMUSG00000000215.12	Ins2	chr7	protein_coding	insulin II
chr7	142232746	142233084	-	142232595	142233084	A3SS	0.2	50	50	ENSMUST00000105934.8	ENSMUSG00000000215.12	Ins2	chr7	protein_coding	insulin II
chr7	142233296	142233399	-	142233296	142268574	A5SS	0.5	50	50	ENSMUST00000210288.2	ENSMUSG00000000215.12	Ins2	chr7	protein_coding	insulin II
chr7	142232470	142233084	-	142232746	142233084	A3SS	0.2	50	50	ENSMUST00000105930.8	ENSMUSG00000000215.12	Ins2	chr7	protein_coding	insulin II
chr7	142232559	142233084	-	142232746	142233084	A3SS	0.2	50	50	ENSMUST00000105930.8	ENSMUSG00000000215.12	Ins2	chr7	protein_coding	insulin II
chr7	142232559	142233084	-	142232470	142233084	A3SS	0.2	50	50	ENSMUST00000125933.2	ENSMUSG00000000215.12	Ins2	chr7	protein_coding	insulin II
chr7	142387616	142404656	+	142369028	142404656	A5SS	0.5	50	50	ENSMUST00000148734.3	ENSMUSG00000073781.5	Gm6471	chr7	lncRNA	predicted gene 6471
chr7	142449189	142449766	-	142449189;142449405	142449260;142449766	ES	0.33	50	50	ENSMUST00000000219.10	ENSMUSG00000000214.12	Th	chr7	protein_coding	tyrosine hydroxylase
chr7	142451927	142484331	-	142451927	142453609	5pMXE	0.5	50	50	ENSMUST00000000219.10	ENSMUSG00000000214.12	Th	chr7	protein_coding	tyrosine hydroxylase
chr7	142451748	142453609	-	142451927	142453609	A3SS	0.5	50	50	ENSMUST00000000219.10	ENSMUSG00000000214.12	Th	chr7	protein_coding	tyrosine hydroxylase
chr7	142450839;142451927	142451703;142484331	-	142450839	142484331	cassetteExon	0.5	100	100	ENSMUST00000105929.11	ENSMUSG00000000214.12	Th	chr7	protein_coding	tyrosine hydroxylase
chr7	142448895;142449189	142449054;142449766	-	142448895	142449766	cassetteExon	0.5	100	100	ENSMUST00000124951.8	ENSMUSG00000000214.12	Th	chr7	protein_coding	tyrosine hydroxylase
chr7	142448895;142449405	142449054;142449766	-	142448895	142449766	cassetteExon	0.5	100	100	ENSMUST00000124951.8	ENSMUSG00000000214.12	Th	chr7	protein_coding	tyrosine hydroxylase
chr7	142560742	142568696	+	142560742;142564845	142564771;142568696	ES	0.33	50	50	ENSMUST00000009396.13	ENSMUSG00000000244.18	Tspan32	chr7	protein_coding	tetraspanin 32
chr7	142564845	142569318	+	142564845;142568797	142568696;142569318	ES	0.5	50	50	ENSMUST00000009396.13	ENSMUSG00000000244.18	Tspan32	chr7	protein_coding	tetraspanin 32
chr7	142569404	142571316	+	142569404;142571021	142570938;142571316	ES	0.5	50	50	ENSMUST00000009396.13	ENSMUSG00000000244.18	Tspan32	chr7	protein_coding	tetraspanin 32
chr7	142564845;142566083	142565895;142568696	+	142564845	142568696	cassetteExon	0.5	100	100	ENSMUST00000009396.13	ENSMUSG00000000244.18	Tspan32	chr7	protein_coding	tetraspanin 32
chr7	142560742	142564771	+	142560742	142570938	A3SS	0.33	50	50	ENSMUST00000207211.2	ENSMUSG00000000244.18	Tspan32	chr7	protein_coding	tetraspanin 32
chr7	142560742	142568696	+	142560742	142570938	A3SS	0.33	50	50	ENSMUST00000207211.2	ENSMUSG00000000244.18	Tspan32	chr7	protein_coding	tetraspanin 32
chr7	142569404	142570938	+	142560742	142570938	A5SS	0.5	50	50	ENSMUST00000207211.2	ENSMUSG00000000244.18	Tspan32	chr7	protein_coding	tetraspanin 32
chr7	142569404	142571316	+	142571021	142571316	A5SS&ES	0.5	50	50	ENSMUST00000207211.2	ENSMUSG00000000244.18	Tspan32	chr7	protein_coding	tetraspanin 32
chr7	142569404	142572428	+	142571410	142572428	A5SS&ES	0.5	50	50	ENSMUST00000207211.2	ENSMUSG00000000244.18	Tspan32	chr7	protein_coding	tetraspanin 32
chr7	142569404	142572428	+	142569404;142571410	142571316;142572428	ES	0.5	50	50	ENSMUST00000145212.8	ENSMUSG00000000244.18	Tspan32	chr7	protein_coding	tetraspanin 32
chr7	142560742;142571021	142570938;142571316	+	142560742;142569404	142564771;142571316	MXE	0.5	100	100	ENSMUST00000145212.8	ENSMUSG00000000244.18	Tspan32	chr7	protein_coding	tetraspanin 32
chr7	142560742;142568797	142568696;142569318	+	142560742;142564845	142564771;142569318	MXE	0.5	100	100	ENSMUST00000105923.8	ENSMUSG00000000244.18	Tspan32	chr7	protein_coding	tetraspanin 32
chr7	142564845	142565895	+	142564845	142569318	A3SS	0.33	50	50	ENSMUST00000105923.8	ENSMUSG00000000244.18	Tspan32	chr7	protein_coding	tetraspanin 32
chr7	142560742;142571410	142570938;142572428	+	142560742;142569404	142564771;142572428	MXE	0.5	100	100	ENSMUST00000105925.8	ENSMUSG00000000244.18	Tspan32	chr7	protein_coding	tetraspanin 32
chr7	142569404;142571410	142570938;142572428	+	142569404	142572428	cassetteExon	0.5	100	100	ENSMUST00000105925.8	ENSMUSG00000000244.18	Tspan32	chr7	protein_coding	tetraspanin 32
chr7	142566083	142568696	+	142560742	142568696	A5SS	0.33	50	50	ENSMUST00000143512.3	ENSMUSG00000000244.18	Tspan32	chr7	protein_coding	tetraspanin 32
chr7	142591118;142593050	142592916;142598232	-	142591118	142598232	cassetteExon	0.5	100	100	ENSMUST00000133630.8	ENSMUSG00000059277.13	R74862	chr7	lncRNA	expressed sequence R74862
chr7	142607083	142616230	+	142606803	142616230	A5SS	0.33	50	50	ENSMUST00000037941.10	ENSMUSG00000037706.18	Cd81	chr7	protein_coding	CD81 antigen
chr7	142612387	142616230	+	142606803	142616230	A5SS	0.33	50	50	ENSMUST00000037941.10	ENSMUSG00000037706.18	Cd81	chr7	protein_coding	CD81 antigen
chr7	142612387	142616230	+	142607083	142616230	A5SS	0.33	50	50	ENSMUST00000207448.2	ENSMUSG00000037706.18	Cd81	chr7	protein_coding	CD81 antigen
chr7	142625240	142626468	-	142623202	142626468	A3SS	0.33	50	50	ENSMUST00000148715.8	ENSMUSG00000009246.15	Trpm5	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 5
chr7	142626173	142626468	-	142623202	142626468	A3SS	0.33	50	50	ENSMUST00000148715.8	ENSMUSG00000009246.15	Trpm5	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 5
chr7	142626173	142626468	-	142625240	142626468	A3SS	0.33	50	50	ENSMUST00000136602.8	ENSMUSG00000009246.15	Trpm5	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 5
chr7	142628340;142629156	142629071;142629230	-	142628340	142629230	cassetteExon	0.5	100	100	ENSMUST00000150589.8	ENSMUSG00000009246.15	Trpm5	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 5
chr7	142634808;142635010	142634919;142635484	-	142634808	142635484	cassetteExon	0.5	100	100	ENSMUST00000150589.8	ENSMUSG00000009246.15	Trpm5	chr7	protein_coding	transient receptor potential cation channel, subfamily M, member 5
chr7	142623557	142623673	+	142623587	142623673	A5SS	0.5	50	50	ENSMUST00000060433.10	ENSMUSG00000045752.14	Tssc4	chr7	protein_coding	tumor-suppressing subchromosomal transferable fragment 4
chr7	142660347	142702485	+	142660180	142702485	A5SS	0.25	50	50	ENSMUST00000186488.7	ENSMUSG00000009545.15	Kcnq1	chr7	protein_coding	potassium voltage-gated channel, subfamily Q, member 1
chr7	142660675	142702485	+	142660180	142702485	A5SS	0.25	50	50	ENSMUST00000186488.7	ENSMUSG00000009545.15	Kcnq1	chr7	protein_coding	potassium voltage-gated channel, subfamily Q, member 1
chr7	142661478	142703235	+	142702544	142703235	A5SS&ES	0.33	50	50	ENSMUST00000186488.7	ENSMUSG00000009545.15	Kcnq1	chr7	protein_coding	potassium voltage-gated channel, subfamily Q, member 1
chr7	142662477	142702485	+	142660180	142702485	A5SS	0.25	50	50	ENSMUST00000186488.7	ENSMUSG00000009545.15	Kcnq1	chr7	protein_coding	potassium voltage-gated channel, subfamily Q, member 1
chr7	142663172	142703235	+	142702544	142703235	A5SS&ES	0.33	50	50	ENSMUST00000186488.7	ENSMUSG00000009545.15	Kcnq1	chr7	protein_coding	potassium voltage-gated channel, subfamily Q, member 1
chr7	142660675	142702485	+	142660347	142702485	A5SS	0.25	50	50	ENSMUST00000186288.7	ENSMUSG00000009545.15	Kcnq1	chr7	protein_coding	potassium voltage-gated channel, subfamily Q, member 1
chr7	142662477	142702485	+	142660347	142702485	A5SS	0.25	50	50	ENSMUST00000186288.7	ENSMUSG00000009545.15	Kcnq1	chr7	protein_coding	potassium voltage-gated channel, subfamily Q, member 1
chr7	142662477	142702485	+	142660675	142702485	A5SS	0.25	50	50	ENSMUST00000186798.2	ENSMUSG00000009545.15	Kcnq1	chr7	protein_coding	potassium voltage-gated channel, subfamily Q, member 1
chr7	142663172	142703235	+	142661478	142703235	A5SS	0.33	50	50	ENSMUST00000009689.11	ENSMUSG00000009545.15	Kcnq1	chr7	protein_coding	potassium voltage-gated channel, subfamily Q, member 1
chr7	142815113	142912447	+	142815113	142979647	A3SS	0.5	50	50	ENSMUST00000185383.2	ENSMUSG00000009545.15	Kcnq1	chr7	protein_coding	potassium voltage-gated channel, subfamily Q, member 1
chr7	142917431	142979647	+	142815113	142979647	A5SS	0.5	50	50	ENSMUST00000185383.2	ENSMUSG00000009545.15	Kcnq1	chr7	protein_coding	potassium voltage-gated channel, subfamily Q, member 1
chr7	143014415	143014590	-	143014453	143014590	A3SS	0.5	50	50	ENSMUST00000167912.9	ENSMUSG00000037664.14	Cdkn1c	chr7	protein_coding	cyclin-dependent kinase inhibitor 1C (P57)
chr7	143012987	143013496	-	143012987	143013532	A5SS	0.5	50	50	ENSMUST00000167912.9	ENSMUSG00000037664.14	Cdkn1c	chr7	protein_coding	cyclin-dependent kinase inhibitor 1C (P57)
chr7	143030042	143033457	+	143030042;143033119	143033022;143033457	ES	0.5	50	50	ENSMUST00000052348.12	ENSMUSG00000000154.17	Slc22a18	chr7	protein_coding	solute carrier family 22 (organic cation transporter), member 18
chr7	143045590	143046543	+	143045590	143046579	A3SS	0.5	50	50	ENSMUST00000052348.12	ENSMUSG00000000154.17	Slc22a18	chr7	protein_coding	solute carrier family 22 (organic cation transporter), member 18
chr7	143028975	143029807	+	143027574	143029807	A5SS	0.5	50	50	ENSMUST00000052348.12	ENSMUSG00000000154.17	Slc22a18	chr7	protein_coding	solute carrier family 22 (organic cation transporter), member 18
chr7	143030042;143033617	143033457;143034127	+	143030042	143034127	cassetteExon	0.5	100	100	ENSMUST00000150791.8	ENSMUSG00000000154.17	Slc22a18	chr7	protein_coding	solute carrier family 22 (organic cation transporter), member 18
chr7	143030042	143033022	+	143030042	143034127	A3SS	0.33	50	50	ENSMUST00000150791.8	ENSMUSG00000000154.17	Slc22a18	chr7	protein_coding	solute carrier family 22 (organic cation transporter), member 18
chr7	143068374	143074121	-	143068374;143072622	143072587;143074121	ES	0.5	50	50	ENSMUST00000072727.7	ENSMUSG00000059119.10	Nap1l4	chr7	protein_coding	nucleosome assembly protein 1-like 4
chr7	143086117	143089388	-	143086117;143088154	143088023;143089388	ES	0.5	50	50	ENSMUST00000072727.7	ENSMUSG00000059119.10	Nap1l4	chr7	protein_coding	nucleosome assembly protein 1-like 4
chr7	143093983;143094467	143094423;143095485	-	143093983	143095485	cassetteExon	0.5	100	100	ENSMUST00000072727.7	ENSMUSG00000059119.10	Nap1l4	chr7	protein_coding	nucleosome assembly protein 1-like 4
chr7	143095515	143099866	-	143095515	143102779	A5SS	0.33	50	50	ENSMUST00000072727.7	ENSMUSG00000059119.10	Nap1l4	chr7	protein_coding	nucleosome assembly protein 1-like 4
chr7	143095515	143102474	-	143095515	143102779	A5SS	0.33	50	50	ENSMUST00000072727.7	ENSMUSG00000059119.10	Nap1l4	chr7	protein_coding	nucleosome assembly protein 1-like 4
chr7	143095515	143099866	-	143095515	143102474	A5SS	0.33	50	50	ENSMUST00000209098.2	ENSMUSG00000059119.10	Nap1l4	chr7	protein_coding	nucleosome assembly protein 1-like 4
chr7	143081048	143088023	-	143081048	143083155	5pMXE	0.5	50	50	ENSMUST00000207244.2	ENSMUSG00000059119.10	Nap1l4	chr7	protein_coding	nucleosome assembly protein 1-like 4
chr7	143081048;143088154	143088023;143089388	-	143081048;143086117	143083155;143089388	MXE	0.5	100	100	ENSMUST00000208317.2	ENSMUSG00000059119.10	Nap1l4	chr7	protein_coding	nucleosome assembly protein 1-like 4
chr7	143086117	143088023	-	143081048	143088023	A3SS	0.5	50	50	ENSMUST00000207948.2	ENSMUSG00000059119.10	Nap1l4	chr7	protein_coding	nucleosome assembly protein 1-like 4
chr7	143095515	143102779	-	143088154	143102779	A3SS	0.5	50	50	ENSMUST00000207948.2	ENSMUSG00000059119.10	Nap1l4	chr7	protein_coding	nucleosome assembly protein 1-like 4
chr7	143088154	143089388	-	143088154	143102779	A5SS	0.5	50	50	ENSMUST00000207948.2	ENSMUSG00000059119.10	Nap1l4	chr7	protein_coding	nucleosome assembly protein 1-like 4
chr7	143113445	143116698	-	143113445;143115663	143115596;143116698	ES	0.5	50	50	ENSMUST00000010899.14	ENSMUSG00000010755.18	Cars	chr7	protein_coding	cysteinyl-tRNA synthetase
chr7	143142320	143153719	-	143142320;143146397	143146149;143153719	ES	0.33	50	50	ENSMUST00000010899.14	ENSMUSG00000010755.18	Cars	chr7	protein_coding	cysteinyl-tRNA synthetase
chr7	143146397;143147063	143146921;143153719	-	143146397	143153719	cassetteExon	0.5	100	100	ENSMUST00000010899.14	ENSMUSG00000010755.18	Cars	chr7	protein_coding	cysteinyl-tRNA synthetase
chr7	143142320	143150279	-	143142320	143146149	A5SS&ES	0.25	50	50	ENSMUST00000010899.14	ENSMUSG00000010755.18	Cars	chr7	protein_coding	cysteinyl-tRNA synthetase
chr7	143142320	143153249	-	143142320	143146149	A5SS&ES	0.25	50	50	ENSMUST00000010899.14	ENSMUSG00000010755.18	Cars	chr7	protein_coding	cysteinyl-tRNA synthetase
chr7	143147063	143153719	-	143142320	143153719	A3SS	0.33	50	50	ENSMUST00000105909.4	ENSMUSG00000010755.18	Cars	chr7	protein_coding	cysteinyl-tRNA synthetase
chr7	143142320	143150279	-	143142320	143153719	A5SS	0.25	50	50	ENSMUST00000105909.4	ENSMUSG00000010755.18	Cars	chr7	protein_coding	cysteinyl-tRNA synthetase
chr7	143142320	143153249	-	143142320	143153719	A5SS	0.25	50	50	ENSMUST00000105909.4	ENSMUSG00000010755.18	Cars	chr7	protein_coding	cysteinyl-tRNA synthetase
chr7	143113445	143116698	-	143115663	143116698	3pMXE	0.5	50	50	ENSMUST00000135032.2	ENSMUSG00000010755.18	Cars	chr7	protein_coding	cysteinyl-tRNA synthetase
chr7	143142320	143153249	-	143142320	143150279	5pMXE	0.25	50	50	ENSMUST00000154022.8	ENSMUSG00000010755.18	Cars	chr7	protein_coding	cysteinyl-tRNA synthetase
chr7	143173167	143181535	-	143173167	143182353	A5SS	0.5	50	50	ENSMUST00000208124.2	ENSMUSG00000045362.9	Tnfrsf26	chr7	protein_coding	tumor necrosis factor receptor superfamily, member 26
chr7	143182142	143221984	+	143182142	143183082	3pMXE	0.5	50	50	ENSMUST00000207959.2	ENSMUSG00000109251.2	E230032D23Rik	chr7	lncRNA	RIKEN cDNA E230032D23 gene
chr7	143192173;143193026	143192982;143193639	-	143192173	143193639	cassetteExon	0.5	100	100	ENSMUST00000075588.13	ENSMUSG00000010751.16	Tnfrsf22	chr7	protein_coding	tumor necrosis factor receptor superfamily, member 22
chr7	143192173	143193639	-	143193026	143193639	3pMXE	0.5	50	50	ENSMUST00000084396.4	ENSMUSG00000010751.16	Tnfrsf22	chr7	protein_coding	tumor necrosis factor receptor superfamily, member 22
chr7	143223792	143233682	-	143223792;143224752	143224569;143233682	ES	0.33	50	50	ENSMUST00000035742.14	ENSMUSG00000037613.17	Tnfrsf23	chr7	protein_coding	tumor necrosis factor receptor superfamily, member 23
chr7	143224680	143233682	-	143224752	143233682	A3SS	0.33	50	50	ENSMUST00000035742.14	ENSMUSG00000037613.17	Tnfrsf23	chr7	protein_coding	tumor necrosis factor receptor superfamily, member 23
chr7	143223792	143233682	-	143223792;143224680	143224569;143233682	ES	0.33	50	50	ENSMUST00000152703.2	ENSMUSG00000037613.17	Tnfrsf23	chr7	protein_coding	tumor necrosis factor receptor superfamily, member 23
chr7	143269559	143295410	-	143269559	143294007	5pMXE	0.33	50	50	ENSMUST00000119499.8	ENSMUSG00000037606.19	Osbpl5	chr7	protein_coding	oxysterol binding protein-like 5
chr7	143269559	143310673	-	143269559	143294007	5pMXE	0.33	50	50	ENSMUST00000119499.8	ENSMUSG00000037606.19	Osbpl5	chr7	protein_coding	oxysterol binding protein-like 5
chr7	143267745	143269403	-	143267315	143269403	A3SS	0.5	50	50	ENSMUST00000119499.8	ENSMUSG00000037606.19	Osbpl5	chr7	protein_coding	oxysterol binding protein-like 5
chr7	143269559	143310673	-	143269559	143295410	5pMXE	0.33	50	50	ENSMUST00000020411.14	ENSMUSG00000037606.19	Osbpl5	chr7	protein_coding	oxysterol binding protein-like 5
chr7	143352320	143353528	-	143352320;143352847	143352778;143353528	ES	0.5	50	50	ENSMUST00000033415.15	ENSMUSG00000031090.15	Nadsyn1	chr7	protein_coding	NAD synthetase 1
chr7	143365037	143366500	-	143365037;143366344	143366227;143366500	ES	0.5	50	50	ENSMUST00000033415.15	ENSMUSG00000031090.15	Nadsyn1	chr7	protein_coding	NAD synthetase 1
chr7	143369964	143374909	-	143369964;143372946	143372830;143374909	ES	0.5	50	50	ENSMUST00000033415.15	ENSMUSG00000031090.15	Nadsyn1	chr7	protein_coding	NAD synthetase 1
chr7	143372946	143376396	-	143372946;143374969	143374909;143376396	ES	0.5	50	50	ENSMUST00000033415.15	ENSMUSG00000031090.15	Nadsyn1	chr7	protein_coding	NAD synthetase 1
chr7	143369459	143369911	-	143369412	143369911	A3SS	0.5	50	50	ENSMUST00000033415.15	ENSMUSG00000031090.15	Nadsyn1	chr7	protein_coding	NAD synthetase 1
chr7	143369964;143374969	143374909;143376396	-	143369964;143372946	143372830;143376396	MXE	0.5	100	100	ENSMUST00000156638.8	ENSMUSG00000031090.15	Nadsyn1	chr7	protein_coding	NAD synthetase 1
chr7	143377277	143383876	+	143377277	143377835	3pMXE	0.5	50	50	ENSMUST00000139748.3	ENSMUSG00000058454.16	Dhcr7	chr7	protein_coding	7-dehydrocholesterol reductase
chr7	143384002;143386657	143386587;143390375	+	143384002	143390375	cassetteExon	0.5	100	100	ENSMUST00000128454.8	ENSMUSG00000058454.16	Dhcr7	chr7	protein_coding	7-dehydrocholesterol reductase
chr7	143384002;143387673	143387505;143390375	+	143384002	143390375	cassetteExon	0.5	100	100	ENSMUST00000128454.8	ENSMUSG00000058454.16	Dhcr7	chr7	protein_coding	7-dehydrocholesterol reductase
chr7	143384002;143387673	143387546;143390375	+	143384002	143390375	cassetteExon	0.5	100	100	ENSMUST00000128454.8	ENSMUSG00000058454.16	Dhcr7	chr7	protein_coding	7-dehydrocholesterol reductase
chr7	143383476	143383876	+	143377277	143383876	A5SS	0.5	50	50	ENSMUST00000128454.8	ENSMUSG00000058454.16	Dhcr7	chr7	protein_coding	7-dehydrocholesterol reductase
chr7	143384136	143390375	+	143384002	143390375	A5SS	0.25	50	50	ENSMUST00000128454.8	ENSMUSG00000058454.16	Dhcr7	chr7	protein_coding	7-dehydrocholesterol reductase
chr7	143391721	143395077	+	143391721	143394170	A3SS&ES	0.5	50	50	ENSMUST00000073878.12	ENSMUSG00000058454.16	Dhcr7	chr7	protein_coding	7-dehydrocholesterol reductase
chr7	143395108	143396862	+	143395108	143396851	A3SS	0.5	50	50	ENSMUST00000073878.12	ENSMUSG00000058454.16	Dhcr7	chr7	protein_coding	7-dehydrocholesterol reductase
chr7	143384002	143386587	+	143384002	143387546	A3SS	0.25	50	50	ENSMUST00000141916.8	ENSMUSG00000058454.16	Dhcr7	chr7	protein_coding	7-dehydrocholesterol reductase
chr7	143384002	143387505	+	143384002	143387546	A3SS	0.25	50	50	ENSMUST00000141916.8	ENSMUSG00000058454.16	Dhcr7	chr7	protein_coding	7-dehydrocholesterol reductase
chr7	143384002	143390375	+	143384002	143387546	A3SS&ES	0.25	50	50	ENSMUST00000141916.8	ENSMUSG00000058454.16	Dhcr7	chr7	protein_coding	7-dehydrocholesterol reductase
chr7	143387673	143390375	+	143387673	143390255	A3SS	0.5	50	50	ENSMUST00000141916.8	ENSMUSG00000058454.16	Dhcr7	chr7	protein_coding	7-dehydrocholesterol reductase
chr7	143390466	143394895	+	143390466	143391499	A3SS&ES	0.5	50	50	ENSMUST00000144034.8	ENSMUSG00000058454.16	Dhcr7	chr7	protein_coding	7-dehydrocholesterol reductase
chr7	143384002;143386657	143386587;143390375	+	143384002;143387673	143387505;143390375	MXE	0.5	100	100	ENSMUST00000143338.2	ENSMUSG00000058454.16	Dhcr7	chr7	protein_coding	7-dehydrocholesterol reductase
chr7	143384136	143390375	+	143387673	143390375	A5SS&ES	0.25	50	50	ENSMUST00000143338.2	ENSMUSG00000058454.16	Dhcr7	chr7	protein_coding	7-dehydrocholesterol reductase
chr7	143384002;143387673	143387546;143390375	+	143384002;143386657	143386587;143390375	MXE	0.5	100	100	ENSMUST00000207143.2	ENSMUSG00000058454.16	Dhcr7	chr7	protein_coding	7-dehydrocholesterol reductase
chr7	143384136	143390375	+	143386657	143390375	A5SS&ES	0.25	50	50	ENSMUST00000207143.2	ENSMUSG00000058454.16	Dhcr7	chr7	protein_coding	7-dehydrocholesterol reductase
chr7	143394260	143394895	+	143390466	143394895	A5SS	0.5	50	50	ENSMUST00000208631.2	ENSMUSG00000058454.16	Dhcr7	chr7	protein_coding	7-dehydrocholesterol reductase
chr7	143425598	143445397	+	143425598;143435013	143434903;143445397	ES	0.25	50	50	ENSMUST00000208457.2	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143450224	143453419	+	143450224	143450962	3pMXE	0.5	50	50	ENSMUST00000208457.2	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143423032;143424126	143423945;143425470	+	143423032	143425470	cassetteExon	0.5	100	100	ENSMUST00000208457.2	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143423032;143424126	143423945;143434903	+	143423032;143425598	143425470;143434903	MXE	0.5	100	100	ENSMUST00000208457.2	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143425598;143426514	143426220;143434903	+	143425598	143434903	cassetteExon	0.5	100	100	ENSMUST00000208457.2	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143435013;143435453	143435375;143445397	+	143435013	143445397	cassetteExon	0.5	100	100	ENSMUST00000208457.2	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143435013;143437745	143437327;143445397	+	143435013	143445397	cassetteExon	0.5	100	100	ENSMUST00000208457.2	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143435013;143437745	143437661;143445397	+	143435013	143445397	cassetteExon	0.5	100	100	ENSMUST00000208457.2	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143423032;143424126	143423945;143434903	+	143423032;143426514	143425470;143434903	MXE	0.5	100	100	ENSMUST00000134455.3	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143435013;143435453	143435375;143437661	+	143435013	143437661	cassetteExon	0.5	100	100	ENSMUST00000134455.3	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143435013;143435453	143435375;143445397	+	143435013;143437745	143437661;143445397	MXE	0.5	100	100	ENSMUST00000134455.3	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143435013	143437327	+	143435013	143437661	A3SS	0.25	50	50	ENSMUST00000134455.3	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143435453	143445397	+	143435453;143437745	143437661;143445397	ES	0.25	50	50	ENSMUST00000207482.2	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143435013	143437327	+	143435013	143435375	A3SS&ES	0.25	50	50	ENSMUST00000207482.2	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143435453	143437327	+	143435453	143437661	A3SS	0.33	50	50	ENSMUST00000207482.2	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143435013;143437745	143437327;143445397	+	143435013;143435453	143435375;143445397	MXE	0.5	100	100	ENSMUST00000207630.2	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143435453;143437745	143437327;143445397	+	143435453	143445397	cassetteExon	0.5	100	100	ENSMUST00000207630.2	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143435013	143437327	+	143435013;143435453	143435375;143437327	ES	0.5	50	50	ENSMUST00000208761.2	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143435013	143437661	+	143435013	143435375	A3SS&ES	0.25	50	50	ENSMUST00000208761.2	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143447945	143453419	+	143447945;143450224	143450043;143453419	ES	0.5	50	50	ENSMUST00000207235.2	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143424126;143435013	143434903;143445397	+	143424126;143425598	143425470;143445397	MXE	0.5	100	100	ENSMUST00000208625.2	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143425598	143426220	+	143425598	143445397	A3SS	0.33	50	50	ENSMUST00000208625.2	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143435453	143445397	+	143425598	143445397	A5SS	0.25	50	50	ENSMUST00000208625.2	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143437745	143445397	+	143425598	143445397	A5SS	0.25	50	50	ENSMUST00000208625.2	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143423032;143425598	143425470;143445397	+	143423032;143437745	143423945;143445397	MXE	0.5	100	100	ENSMUST00000207642.2	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143424126;143425598	143425470;143434903	+	143424126	143434903	cassetteExon	0.5	100	100	ENSMUST00000207642.2	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143424126;143425598	143425470;143445397	+	143424126;143437745	143434903;143445397	MXE	0.5	100	100	ENSMUST00000207642.2	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143426514	143434903	+	143424126	143434903	A5SS	0.33	50	50	ENSMUST00000207642.2	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143447945	143453419	+	143447945	143450043	3pMXE	0.5	50	50	ENSMUST00000179036.8	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143425598	143434903	+	143426514	143434903	5pMXE	0.33	50	50	ENSMUST00000207388.2	ENSMUSG00000031085.17	Acte1	chr7	protein_coding	actin, epsilon 1
chr7	143682142;143682971	143682801;143733492	+	143682142	143733492	cassetteExon	0.5	100	100	ENSMUST00000105902.8	ENSMUSG00000037541.23	Shank2	chr7	protein_coding	SH3 and multiple ankyrin repeat domains 2
chr7	143950168;143950383	143950375;143959067	+	143950168	143959067	cassetteExon	0.5	100	100	ENSMUST00000105902.8	ENSMUSG00000037541.23	Shank2	chr7	protein_coding	SH3 and multiple ankyrin repeat domains 2
chr7	143729693	143733492	+	143682142	143733492	A5SS	0.33	50	50	ENSMUST00000105902.8	ENSMUSG00000037541.23	Shank2	chr7	protein_coding	SH3 and multiple ankyrin repeat domains 2
chr7	143792830	143812802	+	143746267	143812802	A5SS	0.5	50	50	ENSMUST00000105902.8	ENSMUSG00000037541.23	Shank2	chr7	protein_coding	SH3 and multiple ankyrin repeat domains 2
chr7	143951998	143959067	+	143950168	143959067	A5SS	0.33	50	50	ENSMUST00000105902.8	ENSMUSG00000037541.23	Shank2	chr7	protein_coding	SH3 and multiple ankyrin repeat domains 2
chr7	143972096	143974296	+	143965605	143974296	A5SS	0.5	50	50	ENSMUST00000105902.8	ENSMUSG00000037541.23	Shank2	chr7	protein_coding	SH3 and multiple ankyrin repeat domains 2
chr7	143729693	143733492	+	143682971	143733492	A5SS	0.33	50	50	ENSMUST00000213146.2	ENSMUSG00000037541.23	Shank2	chr7	protein_coding	SH3 and multiple ankyrin repeat domains 2
chr7	143950383	143959067	+	143950383;143951998	143951978;143959067	ES	0.33	50	50	ENSMUST00000105900.9	ENSMUSG00000037541.23	Shank2	chr7	protein_coding	SH3 and multiple ankyrin repeat domains 2
chr7	143995584	144003297	-	143995584;143999609	143999540;144003297	ES	0.5	50	50	ENSMUST00000033407.13	ENSMUSG00000031078.16	Cttn	chr7	protein_coding	cortactin
chr7	144003352;144003758	144003674;144005764	-	144003352	144005764	cassetteExon	0.5	100	100	ENSMUST00000033407.13	ENSMUSG00000031078.16	Cttn	chr7	protein_coding	cortactin
chr7	144003352;144004825	144004715;144005764	-	144003352	144005764	cassetteExon	0.5	100	100	ENSMUST00000033407.13	ENSMUSG00000031078.16	Cttn	chr7	protein_coding	cortactin
chr7	144011516	144012438	-	144011516	144014916	A5SS	0.5	50	50	ENSMUST00000033407.13	ENSMUSG00000031078.16	Cttn	chr7	protein_coding	cortactin
chr7	144003352;144003758	144003674;144005764	-	144003352;144004825	144004715;144005764	MXE	0.5	100	100	ENSMUST00000103079.4	ENSMUSG00000031078.16	Cttn	chr7	protein_coding	cortactin
chr7	143995584	144003297	-	143995584	143999540	5pMXE	0.5	50	50	ENSMUST00000126018.2	ENSMUSG00000031078.16	Cttn	chr7	protein_coding	cortactin
chr7	143995584	144003297	-	143999609	144003297	3pMXE	0.5	50	50	ENSMUST00000150607.2	ENSMUSG00000031078.16	Cttn	chr7	protein_coding	cortactin
chr7	144031726	144034822	-	144031726;144032834	144032764;144034822	ES	0.5	50	50	ENSMUST00000168134.10	ENSMUSG00000037519.18	Ppfia1	chr7	protein_coding	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
chr7	144038945	144042934	-	144038945;144042454	144042428;144042934	ES	0.5	50	50	ENSMUST00000168134.10	ENSMUSG00000037519.18	Ppfia1	chr7	protein_coding	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
chr7	144054140	144058640	-	144054140;144056633	144056604;144058640	ES	0.5	50	50	ENSMUST00000168134.10	ENSMUSG00000037519.18	Ppfia1	chr7	protein_coding	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
chr7	144068261;144068683	144068609;144069723	-	144068261	144069723	cassetteExon	0.5	100	100	ENSMUST00000168134.10	ENSMUSG00000037519.18	Ppfia1	chr7	protein_coding	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
chr7	144074575	144074697	-	144074526	144074697	A3SS	0.5	50	50	ENSMUST00000168134.10	ENSMUSG00000037519.18	Ppfia1	chr7	protein_coding	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
chr7	144038945	144045189	-	144038945	144042934	5pMXE	0.33	50	50	ENSMUST00000182982.8	ENSMUSG00000037519.18	Ppfia1	chr7	protein_coding	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
chr7	144038945;144042996	144042934;144045189	-	144038945	144045189	cassetteExon	0.5	100	100	ENSMUST00000182958.8	ENSMUSG00000037519.18	Ppfia1	chr7	protein_coding	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
chr7	144038945	144042428	-	144038945	144045189	A5SS	0.33	50	50	ENSMUST00000182958.8	ENSMUSG00000037519.18	Ppfia1	chr7	protein_coding	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
chr7	144031726	144034822	-	144031726	144032764	5pMXE	0.5	50	50	ENSMUST00000207298.2	ENSMUSG00000037519.18	Ppfia1	chr7	protein_coding	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
chr7	144172657	144175405	-	144172657;144173223	144173212;144175405	ES	0.5	50	50	ENSMUST00000121758.8	ENSMUSG00000031075.20	Ano1	chr7	protein_coding	anoctamin 1, calcium activated chloride channel
chr7	144232516	144305623	-	144232516	144292100	5pMXE	0.33	50	50	ENSMUST00000121758.8	ENSMUSG00000031075.20	Ano1	chr7	protein_coding	anoctamin 1, calcium activated chloride channel
chr7	144168661;144169711	144169634;144172586	-	144168661	144172586	cassetteExon	0.5	100	100	ENSMUST00000121758.8	ENSMUSG00000031075.20	Ano1	chr7	protein_coding	anoctamin 1, calcium activated chloride channel
chr7	144201816;144202377	144202312;144204240	-	144201816	144204240	cassetteExon	0.5	100	100	ENSMUST00000121758.8	ENSMUSG00000031075.20	Ano1	chr7	protein_coding	anoctamin 1, calcium activated chloride channel
chr7	144170350	144172586	-	144168661	144172586	A3SS	0.33	50	50	ENSMUST00000121758.8	ENSMUSG00000031075.20	Ano1	chr7	protein_coding	anoctamin 1, calcium activated chloride channel
chr7	144232516	144292097	-	144232516	144292100	A5SS	0.33	50	50	ENSMUST00000121758.8	ENSMUSG00000031075.20	Ano1	chr7	protein_coding	anoctamin 1, calcium activated chloride channel
chr7	144232516	144305623	-	144232516	144292097	5pMXE	0.33	50	50	ENSMUST00000238848.2	ENSMUSG00000031075.20	Ano1	chr7	protein_coding	anoctamin 1, calcium activated chloride channel
chr7	144170350	144172586	-	144169711	144172586	A3SS	0.33	50	50	ENSMUST00000238848.2	ENSMUSG00000031075.20	Ano1	chr7	protein_coding	anoctamin 1, calcium activated chloride channel
chr7	144301080	144301405	+	144299400	144301405	A5SS	0.5	50	50	ENSMUST00000208733.2	ENSMUSG00000108851.2	Gm44930	chr7	lncRNA	predicted gene 44930
chr7	144319160	144323385	+	144319160;144322130	144322063;144323385	ES	0.5	50	50	ENSMUST00000209134.2	ENSMUSG00000109009.2	Gm44929	chr7	lncRNA	predicted gene 44929
chr7	144415569	144415969	+	144401268	144415969	A5SS	0.5	50	50	ENSMUST00000208265.2	ENSMUSG00000050917.6	Fgf4	chr7	protein_coding	fibroblast growth factor 4
chr7	144450956	144451048	+	144450956	144453386	A3SS	0.33	50	50	ENSMUST00000033389.7	ENSMUSG00000031073.7	Fgf15	chr7	protein_coding	fibroblast growth factor 15
chr7	144450956	144453491	+	144450956	144453386	A3SS	0.33	50	50	ENSMUST00000033389.7	ENSMUSG00000031073.7	Fgf15	chr7	protein_coding	fibroblast growth factor 15
chr7	144450956	144453491	+	144450956	144451048	3pMXE	0.33	50	50	ENSMUST00000207033.2	ENSMUSG00000031073.7	Fgf15	chr7	protein_coding	fibroblast growth factor 15
chr7	144471417;144473078	144472961;144482662	+	144471417	144482662	cassetteExon	0.5	100	100	ENSMUST00000128057.8	ENSMUSG00000031072.15	LTO1	chr7	protein_coding	ABCE maturation factor
chr7	144469279	144470165	+	144469066	144470165	A5SS	0.5	50	50	ENSMUST00000128057.8	ENSMUSG00000031072.15	LTO1	chr7	protein_coding	ABCE maturation factor
chr7	144473078	144482662	+	144473078	144473347	3pMXE	0.33	50	50	ENSMUST00000033388.12	ENSMUSG00000031072.15	LTO1	chr7	protein_coding	ABCE maturation factor
chr7	144473078	144485157	+	144473078	144473347	3pMXE	0.33	50	50	ENSMUST00000033388.12	ENSMUSG00000031072.15	LTO1	chr7	protein_coding	ABCE maturation factor
chr7	144473078	144485157	+	144473078	144482662	3pMXE	0.33	50	50	ENSMUST00000105895.2	ENSMUSG00000031072.15	LTO1	chr7	protein_coding	ABCE maturation factor
chr7	144471417	144482662	+	144471417	144472961	A3SS&ES	0.5	50	50	ENSMUST00000207453.2	ENSMUSG00000031072.15	LTO1	chr7	protein_coding	ABCE maturation factor
chr7	144812351;144814737	144814609;144815670	-	144812351	144815670	cassetteExon	0.5	100	100	ENSMUST00000208328.2	ENSMUSG00000048677.10	Tpcn2	chr7	protein_coding	two pore segment channel 2
chr7	144810333	144810467	-	144750520	144810467	A3SS	0.5	50	50	ENSMUST00000208328.2	ENSMUSG00000048677.10	Tpcn2	chr7	protein_coding	two pore segment channel 2
chr7	144815416	144815670	-	144812351	144815670	A3SS	0.33	50	50	ENSMUST00000208328.2	ENSMUSG00000048677.10	Tpcn2	chr7	protein_coding	two pore segment channel 2
chr7	144831468	144832474	-	144830962	144832474	A3SS	0.5	50	50	ENSMUST00000208328.2	ENSMUSG00000048677.10	Tpcn2	chr7	protein_coding	two pore segment channel 2
chr7	144812351	144813764	-	144812351	144815670	A5SS	0.25	50	50	ENSMUST00000208328.2	ENSMUSG00000048677.10	Tpcn2	chr7	protein_coding	two pore segment channel 2
chr7	144812351	144813826	-	144812351	144815670	A5SS	0.25	50	50	ENSMUST00000208328.2	ENSMUSG00000048677.10	Tpcn2	chr7	protein_coding	two pore segment channel 2
chr7	144814737	144815670	-	144814737;144815416	144815298;144815670	ES	0.33	50	50	ENSMUST00000209047.2	ENSMUSG00000048677.10	Tpcn2	chr7	protein_coding	two pore segment channel 2
chr7	144812351;144813875	144813764;144814609	-	144812351	144814609	cassetteExon	0.5	100	100	ENSMUST00000209047.2	ENSMUSG00000048677.10	Tpcn2	chr7	protein_coding	two pore segment channel 2
chr7	144812351;144813875	144813826;144814609	-	144812351	144814609	cassetteExon	0.5	100	100	ENSMUST00000209047.2	ENSMUSG00000048677.10	Tpcn2	chr7	protein_coding	two pore segment channel 2
chr7	144808435	144809188	-	144769264	144809188	A3SS	0.5	50	50	ENSMUST00000209047.2	ENSMUSG00000048677.10	Tpcn2	chr7	protein_coding	two pore segment channel 2
chr7	144808435	144809049	-	144808435	144809188	A5SS	0.5	50	50	ENSMUST00000058022.6	ENSMUSG00000048677.10	Tpcn2	chr7	protein_coding	two pore segment channel 2
chr7	144812351	144813764	-	144812351	144813826	A5SS	0.25	50	50	ENSMUST00000058022.6	ENSMUSG00000048677.10	Tpcn2	chr7	protein_coding	two pore segment channel 2
chr7	144760318	144760692	-	144760318	144760666	A5SS	0.5	50	50	ENSMUST00000208788.2	ENSMUSG00000109305.2	Smim38	chr7	protein_coding	small integral membrane protein 38
chr7	144857665;144861224	144861098;144861488	+	144857665	144861488	cassetteExon	0.5	100	100	ENSMUST00000033386.12	ENSMUSG00000031070.16	Mrgprf	chr7	protein_coding	MAS-related GPR, member F
chr8	3206023	3208696	-	3203679	3208696	A3SS	0.5	50	50	ENSMUST00000208839.2	ENSMUSG00000005534.11	Insr	chr8	protein_coding	insulin receptor
chr8	3224888;3231737	3231702;3234951	-	3224888	3234951	cassetteExon	0.5	100	100	ENSMUST00000091291.5	ENSMUSG00000005534.11	Insr	chr8	protein_coding	insulin receptor
chr8	3403730	3414628	+	3403730	3430258	A3SS	0.5	50	50	ENSMUST00000208363.2	ENSMUSG00000004568.14	Arhgef18	chr8	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 18
chr8	3436417	3436636	+	3436417	3436922	A3SS	0.5	50	50	ENSMUST00000208363.2	ENSMUSG00000004568.14	Arhgef18	chr8	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 18
chr8	3438418	3477349	+	3438418	3438723	3pMXE	0.5	50	50	ENSMUST00000098966.5	ENSMUSG00000004568.14	Arhgef18	chr8	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 18
chr8	3410941	3414628	+	3403730	3414628	A5SS	0.5	50	50	ENSMUST00000098966.5	ENSMUSG00000004568.14	Arhgef18	chr8	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 18
chr8	3477490	3479090	+	3477490	3479232	A3SS	0.5	50	50	ENSMUST00000239102.2	ENSMUSG00000004568.14	Arhgef18	chr8	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 18
chr8	3443102	3477349	+	3438418	3477349	A5SS	0.33	50	50	ENSMUST00000239102.2	ENSMUSG00000004568.14	Arhgef18	chr8	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 18
chr8	3443224	3477349	+	3438418	3477349	A5SS	0.33	50	50	ENSMUST00000239102.2	ENSMUSG00000004568.14	Arhgef18	chr8	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 18
chr8	3443224	3477349	+	3443102	3477349	A5SS	0.33	50	50	ENSMUST00000131773.8	ENSMUSG00000004568.14	Arhgef18	chr8	protein_coding	rho/rac guanine nucleotide exchange factor (GEF) 18
chr8	3514100	3517572	-	3514100;3515971	3515783;3517572	ES	0.5	50	50	ENSMUST00000004686.13	ENSMUSG00000069633.13	Pex11g	chr8	protein_coding	peroxisomal biogenesis factor 11 gamma
chr8	3513746	3513922	-	3510334	3513922	A3SS	0.5	50	50	ENSMUST00000004686.13	ENSMUSG00000069633.13	Pex11g	chr8	protein_coding	peroxisomal biogenesis factor 11 gamma
chr8	3533770	3534052	+	3533765	3534052	A5SS	0.5	50	50	ENSMUST00000159076.8	ENSMUSG00000040340.14	Tex45	chr8	protein_coding	testis expressed 45
chr8	3543309;3543887	3543805;3545382	+	3543309	3545382	cassetteExon	0.5	100	100	ENSMUST00000061508.8	ENSMUSG00000047264.9	Zfp358	chr8	protein_coding	zinc finger protein 358
chr8	3562865	3565014	+	3562865;3564913	3564783;3565014	ES	0.5	50	50	ENSMUST00000004683.13	ENSMUSG00000004567.17	Mcoln1	chr8	protein_coding	mucolipin 1
chr8	3555943	3556909	+	3555943	3557149	A3SS	0.33	50	50	ENSMUST00000004683.13	ENSMUSG00000004567.17	Mcoln1	chr8	protein_coding	mucolipin 1
chr8	3562865	3564790	+	3562865	3564783	A3SS	0.33	50	50	ENSMUST00000004683.13	ENSMUSG00000004567.17	Mcoln1	chr8	protein_coding	mucolipin 1
chr8	3555943	3562650	+	3555943	3556909	3pMXE	0.33	50	50	ENSMUST00000160338.2	ENSMUSG00000004567.17	Mcoln1	chr8	protein_coding	mucolipin 1
chr8	3555943	3557149	+	3555943	3562650	A3SS	0.33	50	50	ENSMUST00000208306.2	ENSMUSG00000004567.17	Mcoln1	chr8	protein_coding	mucolipin 1
chr8	3561810	3562650	+	3555943	3562650	A5SS	0.5	50	50	ENSMUST00000208306.2	ENSMUSG00000004567.17	Mcoln1	chr8	protein_coding	mucolipin 1
chr8	3562865	3565014	+	3562865;3564913	3564790;3565014	ES	0.5	50	50	ENSMUST00000208359.2	ENSMUSG00000004567.17	Mcoln1	chr8	protein_coding	mucolipin 1
chr8	3562865	3565014	+	3562865	3564783	A3SS	0.33	50	50	ENSMUST00000161842.2	ENSMUSG00000004567.17	Mcoln1	chr8	protein_coding	mucolipin 1
chr8	3562865	3565014	+	3564913	3565014	5pMXE	0.5	50	50	ENSMUST00000161705.3	ENSMUSG00000004567.17	Mcoln1	chr8	protein_coding	mucolipin 1
chr8	3565556	3566681	+	3565556;3566568	3566510;3566681	ES	0.33	50	50	ENSMUST00000111070.4	ENSMUSG00000004565.16	Pnpla6	chr8	protein_coding	patatin-like phospholipase domain containing 6
chr8	3587520	3591291	+	3587520;3588085	3587969;3591291	ES	0.33	50	50	ENSMUST00000111070.4	ENSMUSG00000004565.16	Pnpla6	chr8	protein_coding	patatin-like phospholipase domain containing 6
chr8	3587520;3587883	3587767;3591291	+	3587520;3588085	3587969;3591291	MXE	0.5	100	100	ENSMUST00000111070.4	ENSMUSG00000004565.16	Pnpla6	chr8	protein_coding	patatin-like phospholipase domain containing 6
chr8	3565556	3566507	+	3565556	3566510	A3SS	0.33	50	50	ENSMUST00000111070.4	ENSMUSG00000004565.16	Pnpla6	chr8	protein_coding	patatin-like phospholipase domain containing 6
chr8	3573867	3574011	+	3573867	3573999	A3SS	0.5	50	50	ENSMUST00000111070.4	ENSMUSG00000004565.16	Pnpla6	chr8	protein_coding	patatin-like phospholipase domain containing 6
chr8	3574329	3574948	+	3574329	3580962	A3SS	0.5	50	50	ENSMUST00000111070.4	ENSMUSG00000004565.16	Pnpla6	chr8	protein_coding	patatin-like phospholipase domain containing 6
chr8	3586002	3586572	+	3586002	3586543	A3SS	0.5	50	50	ENSMUST00000111070.4	ENSMUSG00000004565.16	Pnpla6	chr8	protein_coding	patatin-like phospholipase domain containing 6
chr8	3591592	3592313	+	3591592	3592298	A3SS	0.5	50	50	ENSMUST00000111070.4	ENSMUSG00000004565.16	Pnpla6	chr8	protein_coding	patatin-like phospholipase domain containing 6
chr8	3565465	3566510	+	3565556	3566510	A5SS	0.5	50	50	ENSMUST00000111070.4	ENSMUSG00000004565.16	Pnpla6	chr8	protein_coding	patatin-like phospholipase domain containing 6
chr8	3565465	3566681	+	3566568	3566681	A5SS&ES	0.33	50	50	ENSMUST00000111070.4	ENSMUSG00000004565.16	Pnpla6	chr8	protein_coding	patatin-like phospholipase domain containing 6
chr8	3565556;3566568	3566507;3566681	+	3565556	3566681	cassetteExon	0.5	100	100	ENSMUST00000004681.14	ENSMUSG00000004565.16	Pnpla6	chr8	protein_coding	patatin-like phospholipase domain containing 6
chr8	3565465	3566681	+	3565556	3566681	A5SS	0.33	50	50	ENSMUST00000004681.14	ENSMUSG00000004565.16	Pnpla6	chr8	protein_coding	patatin-like phospholipase domain containing 6
chr8	3565465;3566568	3566510;3566681	+	3565465	3566681	cassetteExon	0.5	100	100	ENSMUST00000208310.2	ENSMUSG00000004565.16	Pnpla6	chr8	protein_coding	patatin-like phospholipase domain containing 6
chr8	3565690	3566507	+	3565556	3566507	A5SS	0.5	50	50	ENSMUST00000208006.2	ENSMUSG00000004565.16	Pnpla6	chr8	protein_coding	patatin-like phospholipase domain containing 6
chr8	3565556	3566681	+	3566568	3566681	A5SS&ES	0.33	50	50	ENSMUST00000207146.2	ENSMUSG00000004565.16	Pnpla6	chr8	protein_coding	patatin-like phospholipase domain containing 6
chr8	3587520	3591291	+	3587520	3587969	3pMXE	0.33	50	50	ENSMUST00000208851.2	ENSMUSG00000004565.16	Pnpla6	chr8	protein_coding	patatin-like phospholipase domain containing 6
chr8	3587520	3587767	+	3587520	3587969	A3SS	0.33	50	50	ENSMUST00000208851.2	ENSMUSG00000004565.16	Pnpla6	chr8	protein_coding	patatin-like phospholipase domain containing 6
chr8	3587520;3587883	3587767;3591291	+	3587520	3591291	cassetteExon	0.5	100	100	ENSMUST00000207941.2	ENSMUSG00000004565.16	Pnpla6	chr8	protein_coding	patatin-like phospholipase domain containing 6
chr8	3587520;3588085	3587767;3591291	+	3587520	3591291	cassetteExon	0.5	100	100	ENSMUST00000207941.2	ENSMUSG00000004565.16	Pnpla6	chr8	protein_coding	patatin-like phospholipase domain containing 6
chr8	3587520	3591291	+	3588085	3591291	5pMXE	0.33	50	50	ENSMUST00000207336.2	ENSMUSG00000004565.16	Pnpla6	chr8	protein_coding	patatin-like phospholipase domain containing 6
chr8	3587883	3591291	+	3588085	3591291	5pMXE	0.33	50	50	ENSMUST00000207336.2	ENSMUSG00000004565.16	Pnpla6	chr8	protein_coding	patatin-like phospholipase domain containing 6
chr8	3629921	3633835	+	3629921;3630474	3630400;3633835	ES	0.5	50	50	ENSMUST00000136592.2	ENSMUSG00000065952.14	Rps23rg1	chr8	protein_coding	ribosomal protein S23, retrogene 1
chr8	3629921	3633835	+	3630474	3633835	5pMXE	0.5	50	50	ENSMUST00000086479.7	ENSMUSG00000065952.14	Rps23rg1	chr8	protein_coding	ribosomal protein S23, retrogene 1
chr8	3656406	3657791	+	3656406;3656820	3656504;3657791	ES	0.5	50	50	ENSMUST00000057028.15	ENSMUSG00000044433.17	Camsap3	chr8	protein_coding	calmodulin regulated spectrin-associated protein family, member 3
chr8	3648988;3649249	3649217;3650676	+	3648988	3650676	cassetteExon	0.5	100	100	ENSMUST00000057028.15	ENSMUSG00000044433.17	Camsap3	chr8	protein_coding	calmodulin regulated spectrin-associated protein family, member 3
chr8	3648988;3650405	3650358;3650676	+	3648988	3650676	cassetteExon	0.5	100	100	ENSMUST00000057028.15	ENSMUSG00000044433.17	Camsap3	chr8	protein_coding	calmodulin regulated spectrin-associated protein family, member 3
chr8	3652279	3652368	+	3652279	3652371	A3SS	0.5	50	50	ENSMUST00000057028.15	ENSMUSG00000044433.17	Camsap3	chr8	protein_coding	calmodulin regulated spectrin-associated protein family, member 3
chr8	3653501	3654854	+	3653501	3653606	A3SS	0.5	50	50	ENSMUST00000057028.15	ENSMUSG00000044433.17	Camsap3	chr8	protein_coding	calmodulin regulated spectrin-associated protein family, member 3
chr8	3638229	3647842	+	3637959	3647842	A5SS	0.5	50	50	ENSMUST00000057028.15	ENSMUSG00000044433.17	Camsap3	chr8	protein_coding	calmodulin regulated spectrin-associated protein family, member 3
chr8	3648988;3650405	3650358;3650676	+	3648988;3649249	3649217;3650676	MXE	0.5	100	100	ENSMUST00000207970.2	ENSMUSG00000044433.17	Camsap3	chr8	protein_coding	calmodulin regulated spectrin-associated protein family, member 3
chr8	3649249;3650405	3650358;3650676	+	3649249	3650676	cassetteExon	0.5	100	100	ENSMUST00000207970.2	ENSMUSG00000044433.17	Camsap3	chr8	protein_coding	calmodulin regulated spectrin-associated protein family, member 3
chr8	3648988;3649249	3649217;3650358	+	3648988	3650358	cassetteExon	0.5	100	100	ENSMUST00000207533.2	ENSMUSG00000044433.17	Camsap3	chr8	protein_coding	calmodulin regulated spectrin-associated protein family, member 3
chr8	3656406	3657791	+	3656406	3656504	A3SS	0.5	50	50	ENSMUST00000207930.2	ENSMUSG00000044433.17	Camsap3	chr8	protein_coding	calmodulin regulated spectrin-associated protein family, member 3
chr8	3666125	3666250	-	3666158	3666250	A3SS	0.5	50	50	ENSMUST00000163038.8	ENSMUSG00000019470.13	Xab2	chr8	protein_coding	XPA binding protein 2
chr8	3668666	3668859	-	3668666	3668945	A5SS	0.5	50	50	ENSMUST00000163038.8	ENSMUSG00000019470.13	Xab2	chr8	protein_coding	XPA binding protein 2
chr8	3671695	3672342	+	3671611	3672342	A5SS	0.5	50	50	ENSMUST00000208950.2	ENSMUSG00000087687.4	Pet100	chr8	protein_coding	PET100 homolog
chr8	3673558;3673754	3673696;3674508	-	3673558	3674508	cassetteExon	0.5	100	100	ENSMUST00000136105.8	ENSMUSG00000004630.19	Pcp2	chr8	protein_coding	Purkinje cell protein 2 (L7)
chr8	3674900	3675002	-	3674900	3675470	A5SS	0.33	50	50	ENSMUST00000136105.8	ENSMUSG00000004630.19	Pcp2	chr8	protein_coding	Purkinje cell protein 2 (L7)
chr8	3674900	3675210	-	3674900	3675470	A5SS	0.33	50	50	ENSMUST00000136105.8	ENSMUSG00000004630.19	Pcp2	chr8	protein_coding	Purkinje cell protein 2 (L7)
chr8	3674900	3675210	-	3674900	3675002	5pMXE	0.33	50	50	ENSMUST00000133459.8	ENSMUSG00000004630.19	Pcp2	chr8	protein_coding	Purkinje cell protein 2 (L7)
chr8	3682269	3683291	+	3682269;3682581	3682500;3683291	ES	0.25	50	50	ENSMUST00000160708.8	ENSMUSG00000004626.15	Stxbp2	chr8	protein_coding	syntaxin binding protein 2
chr8	3684123	3685446	+	3684123;3684623	3684475;3685446	ES	0.5	50	50	ENSMUST00000160708.8	ENSMUSG00000004626.15	Stxbp2	chr8	protein_coding	syntaxin binding protein 2
chr8	3689617	3691735	+	3689617;3691206	3691111;3691735	ES	0.5	50	50	ENSMUST00000160708.8	ENSMUSG00000004626.15	Stxbp2	chr8	protein_coding	syntaxin binding protein 2
chr8	3683367	3683831	+	3683367	3683848	A3SS	0.5	50	50	ENSMUST00000160708.8	ENSMUSG00000004626.15	Stxbp2	chr8	protein_coding	syntaxin binding protein 2
chr8	3689617	3690749	+	3689617	3691111	A3SS	0.33	50	50	ENSMUST00000160708.8	ENSMUSG00000004626.15	Stxbp2	chr8	protein_coding	syntaxin binding protein 2
chr8	3691820	3691895	+	3691820	3691898	A3SS	0.5	50	50	ENSMUST00000160708.8	ENSMUSG00000004626.15	Stxbp2	chr8	protein_coding	syntaxin binding protein 2
chr8	3681278	3682220	+	3681204	3682220	A5SS	0.5	50	50	ENSMUST00000160708.8	ENSMUSG00000004626.15	Stxbp2	chr8	protein_coding	syntaxin binding protein 2
chr8	3682600	3683291	+	3682581	3683291	A5SS	0.25	50	50	ENSMUST00000160708.8	ENSMUSG00000004626.15	Stxbp2	chr8	protein_coding	syntaxin binding protein 2
chr8	3681204	3683291	+	3681204;3682269	3682220;3683291	ES	0.25	50	50	ENSMUST00000162867.8	ENSMUSG00000004626.15	Stxbp2	chr8	protein_coding	syntaxin binding protein 2
chr8	3682269;3682600	3682500;3683291	+	3682269	3683291	cassetteExon	0.5	100	100	ENSMUST00000162867.8	ENSMUSG00000004626.15	Stxbp2	chr8	protein_coding	syntaxin binding protein 2
chr8	3681204	3683291	+	3682581	3683291	A5SS&ES	0.25	50	50	ENSMUST00000159888.8	ENSMUSG00000004626.15	Stxbp2	chr8	protein_coding	syntaxin binding protein 2
chr8	3684123	3685446	+	3684123	3684475	3pMXE	0.5	50	50	ENSMUST00000162737.8	ENSMUSG00000004626.15	Stxbp2	chr8	protein_coding	syntaxin binding protein 2
chr8	3681204;3682581	3682220;3683291	+	3681204	3683291	cassetteExon	0.5	100	100	ENSMUST00000163044.2	ENSMUSG00000004626.15	Stxbp2	chr8	protein_coding	syntaxin binding protein 2
chr8	3681204;3682600	3682220;3683291	+	3681204	3683291	cassetteExon	0.5	100	100	ENSMUST00000163044.2	ENSMUSG00000004626.15	Stxbp2	chr8	protein_coding	syntaxin binding protein 2
chr8	3689617	3691735	+	3689617	3690749	3pMXE	0.33	50	50	ENSMUST00000160435.2	ENSMUSG00000004626.15	Stxbp2	chr8	protein_coding	syntaxin binding protein 2
chr8	3689617;3691206	3690749;3691735	+	3689617	3691735	cassetteExon	0.5	100	100	ENSMUST00000159370.8	ENSMUSG00000004626.15	Stxbp2	chr8	protein_coding	syntaxin binding protein 2
chr8	3689617	3691735	+	3691206	3691735	5pMXE	0.5	50	50	ENSMUST00000159652.8	ENSMUSG00000004626.15	Stxbp2	chr8	protein_coding	syntaxin binding protein 2
chr8	3738349	3738798	-	3738349;3738596	3738534;3738798	ES	0.5	50	50	ENSMUST00000005678.6	ENSMUSG00000005540.11	Fcer2a	chr8	protein_coding	Fc receptor, IgE, low affinity II, alpha polypeptide
chr8	3738596	3739777	-	3738596;3738860	3738798;3739777	ES	0.5	50	50	ENSMUST00000005678.6	ENSMUSG00000005540.11	Fcer2a	chr8	protein_coding	Fc receptor, IgE, low affinity II, alpha polypeptide
chr8	3739830	3741119	-	3739830;3740141	3740022;3741119	ES	0.33	50	50	ENSMUST00000005678.6	ENSMUSG00000005540.11	Fcer2a	chr8	protein_coding	Fc receptor, IgE, low affinity II, alpha polypeptide
chr8	3740060	3741119	-	3740141	3741119	A3SS	0.33	50	50	ENSMUST00000005678.6	ENSMUSG00000005540.11	Fcer2a	chr8	protein_coding	Fc receptor, IgE, low affinity II, alpha polypeptide
chr8	3740141	3740327	-	3740141	3741119	A5SS	0.33	50	50	ENSMUST00000005678.6	ENSMUSG00000005540.11	Fcer2a	chr8	protein_coding	Fc receptor, IgE, low affinity II, alpha polypeptide
chr8	3740141	3740809	-	3740141	3741119	A5SS	0.33	50	50	ENSMUST00000005678.6	ENSMUSG00000005540.11	Fcer2a	chr8	protein_coding	Fc receptor, IgE, low affinity II, alpha polypeptide
chr8	3740141	3740809	-	3740141	3740327	5pMXE	0.33	50	50	ENSMUST00000208145.2	ENSMUSG00000005540.11	Fcer2a	chr8	protein_coding	Fc receptor, IgE, low affinity II, alpha polypeptide
chr8	3738349;3738596	3738534;3739777	-	3738349;3738860	3738798;3739777	MXE	0.5	100	100	ENSMUST00000208438.2	ENSMUSG00000005540.11	Fcer2a	chr8	protein_coding	Fc receptor, IgE, low affinity II, alpha polypeptide
chr8	3739830	3741119	-	3739830;3740060	3740022;3741119	ES	0.33	50	50	ENSMUST00000207635.2	ENSMUSG00000005540.11	Fcer2a	chr8	protein_coding	Fc receptor, IgE, low affinity II, alpha polypeptide
chr8	3739830	3741119	-	3740141	3741119	A3SS	0.33	50	50	ENSMUST00000207327.2	ENSMUSG00000005540.11	Fcer2a	chr8	protein_coding	Fc receptor, IgE, low affinity II, alpha polypeptide
chr8	3766556	3767194	-	3758826	3767194	A3SS	0.5	50	50	ENSMUST00000160527.8	ENSMUSG00000074491.10	Clec4g	chr8	protein_coding	C-type lectin domain family 4, member g
chr8	3767827	3768345	-	3767827	3768342	A5SS	0.5	50	50	ENSMUST00000062037.7	ENSMUSG00000074491.10	Clec4g	chr8	protein_coding	C-type lectin domain family 4, member g
chr8	3797032	3798324	-	3797032;3797711	3797631;3798324	ES	0.5	50	50	ENSMUST00000012847.3	ENSMUSG00000031494.8	Cd209a	chr8	protein_coding	CD209a antigen
chr8	3797032;3798759	3798324;3798861	-	3797032;3797711	3797631;3798861	MXE	0.5	100	100	ENSMUST00000208960.2	ENSMUSG00000031494.8	Cd209a	chr8	protein_coding	CD209a antigen
chr8	3797711;3798759	3798324;3798861	-	3797711	3798861	cassetteExon	0.5	100	100	ENSMUST00000208960.2	ENSMUSG00000031494.8	Cd209a	chr8	protein_coding	CD209a antigen
chr8	3797711	3798861	-	3797711	3798324	A5SS&ES	0.5	50	50	ENSMUST00000207906.2	ENSMUSG00000031494.8	Cd209a	chr8	protein_coding	CD209a antigen
chr8	3927130	3928251	-	3927130;3927969	3927880;3928251	ES	0.5	50	50	ENSMUST00000011445.8	ENSMUSG00000031495.9	Cd209d	chr8	protein_coding	CD209d antigen
chr8	3975435	3976552	-	3975435;3976026	3975937;3976552	ES	0.5	50	50	ENSMUST00000111014.8	ENSMUSG00000065987.13	Cd209b	chr8	protein_coding	CD209b antigen
chr8	3968827;3968982	3968920;3969950	-	3968827	3969950	cassetteExon	0.5	100	100	ENSMUST00000111014.8	ENSMUSG00000065987.13	Cd209b	chr8	protein_coding	CD209b antigen
chr8	3970059;3971491	3971340;3971983	-	3970059	3971983	cassetteExon	0.5	100	100	ENSMUST00000111014.8	ENSMUSG00000065987.13	Cd209b	chr8	protein_coding	CD209b antigen
chr8	3994182	3995677	-	3994182;3995038	3994887;3995677	ES	0.5	50	50	ENSMUST00000044060.14	ENSMUSG00000040165.15	Cd209c	chr8	protein_coding	CD209c antigen
chr8	3995763	4003393	-	3995763	3995872	5pMXE	0.5	50	50	ENSMUST00000044060.14	ENSMUSG00000040165.15	Cd209c	chr8	protein_coding	CD209c antigen
chr8	4153822	4154102	-	4153734	4154102	A3SS	0.5	50	50	ENSMUST00000145007.8	ENSMUSG00000051906.16	Cd209f	chr8	protein_coding	CD209f antigen
chr8	4154310	4154485	-	4154253	4154485	A3SS	0.5	50	50	ENSMUST00000145007.8	ENSMUSG00000051906.16	Cd209f	chr8	protein_coding	CD209f antigen
chr8	4243366	4250868	+	4243366	4243549	3pMXE	0.5	50	50	ENSMUST00000239400.2	ENSMUSG00000011832.17	Evi5l	chr8	protein_coding	ecotropic viral integration site 5 like
chr8	4250921	4252936	+	4250921;4251966	4251934;4252936	ES	0.5	50	50	ENSMUST00000176149.9	ENSMUSG00000011832.17	Evi5l	chr8	protein_coding	ecotropic viral integration site 5 like
chr8	4250921	4251818	+	4250921	4251934	A3SS	0.25	50	50	ENSMUST00000176149.9	ENSMUSG00000011832.17	Evi5l	chr8	protein_coding	ecotropic viral integration site 5 like
chr8	4253174	4253514	+	4253076	4253514	A5SS	0.33	50	50	ENSMUST00000176149.9	ENSMUSG00000011832.17	Evi5l	chr8	protein_coding	ecotropic viral integration site 5 like
chr8	4250921;4253076	4252936;4253514	+	4250921	4253514	cassetteExon	0.5	100	100	ENSMUST00000176072.9	ENSMUSG00000011832.17	Evi5l	chr8	protein_coding	ecotropic viral integration site 5 like
chr8	4250921;4253174	4252936;4253514	+	4250921	4253514	cassetteExon	0.5	100	100	ENSMUST00000176072.9	ENSMUSG00000011832.17	Evi5l	chr8	protein_coding	ecotropic viral integration site 5 like
chr8	4250921	4251818	+	4250921	4253514	A3SS	0.25	50	50	ENSMUST00000176072.9	ENSMUSG00000011832.17	Evi5l	chr8	protein_coding	ecotropic viral integration site 5 like
chr8	4250921	4251934	+	4250921	4253514	A3SS	0.25	50	50	ENSMUST00000176072.9	ENSMUSG00000011832.17	Evi5l	chr8	protein_coding	ecotropic viral integration site 5 like
chr8	4250921;4251966	4251818;4252936	+	4250921	4252936	cassetteExon	0.5	100	100	ENSMUST00000176764.9	ENSMUSG00000011832.17	Evi5l	chr8	protein_coding	ecotropic viral integration site 5 like
chr8	4250921	4252936	+	4250921	4251818	A3SS	0.25	50	50	ENSMUST00000177309.2	ENSMUSG00000011832.17	Evi5l	chr8	protein_coding	ecotropic viral integration site 5 like
chr8	4266555	4266849	-	4266555	4266868	A5SS	0.33	50	50	ENSMUST00000168386.9	ENSMUSG00000064125.15	Prr36	chr8	protein_coding	proline rich 36
chr8	4266555	4266857	-	4266555	4266868	A5SS	0.33	50	50	ENSMUST00000168386.9	ENSMUSG00000064125.15	Prr36	chr8	protein_coding	proline rich 36
chr8	4266555	4266849	-	4266555	4266857	A5SS	0.33	50	50	ENSMUST00000177491.8	ENSMUSG00000064125.15	Prr36	chr8	protein_coding	proline rich 36
chr8	4281462	4281662	+	4277005	4281662	A5SS	0.5	50	50	ENSMUST00000053035.7	ENSMUSG00000046589.8	Lrrc8e	chr8	protein_coding	leucine rich repeat containing 8 family, member E
chr8	4294775	4295543	+	4294775;4295003	4294861;4295543	ES	0.5	50	50	ENSMUST00000110998.9	ENSMUSG00000002948.20	Map2k7	chr8	protein_coding	mitogen-activated protein kinase kinase 7
chr8	4289033;4290735	4290688;4293304	+	4289033	4293304	cassetteExon	0.5	100	100	ENSMUST00000110998.9	ENSMUSG00000002948.20	Map2k7	chr8	protein_coding	mitogen-activated protein kinase kinase 7
chr8	4290289	4293304	+	4289033	4293304	A5SS	0.33	50	50	ENSMUST00000110998.9	ENSMUSG00000002948.20	Map2k7	chr8	protein_coding	mitogen-activated protein kinase kinase 7
chr8	4290289	4293304	+	4290735	4293304	A5SS&ES	0.33	50	50	ENSMUST00000062686.11	ENSMUSG00000002948.20	Map2k7	chr8	protein_coding	mitogen-activated protein kinase kinase 7
chr8	4295825	4299205	+	4295825	4297657	3pMXE	0.5	50	50	ENSMUST00000003027.14	ENSMUSG00000002948.20	Map2k7	chr8	protein_coding	mitogen-activated protein kinase kinase 7
chr8	4298352	4299205	+	4295825	4299205	A5SS	0.5	50	50	ENSMUST00000145165.8	ENSMUSG00000109061.2	Gm49320	chr8	protein_coding	predicted gene, 49320
chr8	4301177	4301293	+	4300921	4301293	A5SS	0.5	50	50	ENSMUST00000110993.2	ENSMUSG00000089736.3	Tgfbr3l	chr8	protein_coding	transforming growth factor, beta receptor III-like
chr8	4303651	4304282	+	4303304	4304282	A5SS	0.5	50	50	ENSMUST00000011981.5	ENSMUSG00000011837.5	Snapc2	chr8	protein_coding	small nuclear RNA activating complex, polypeptide 2
chr8	4317540	4317637	-	4317340	4317637	A3SS	0.5	50	50	ENSMUST00000149827.8	ENSMUSG00000002949.16	Timm44	chr8	protein_coding	translocase of inner mitochondrial membrane 44
chr8	4318016	4318300	-	4318013	4318300	A3SS	0.5	50	50	ENSMUST00000149827.8	ENSMUSG00000002949.16	Timm44	chr8	protein_coding	translocase of inner mitochondrial membrane 44
chr8	4361786	4362557	-	4361786	4374886	A5SS	0.5	50	50	ENSMUST00000098950.6	ENSMUSG00000040028.11	Elavl1	chr8	protein_coding	ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)
chr8	4377893;4399894	4399606;4403883	+	4377893	4403883	cassetteExon	0.5	100	100	ENSMUST00000155797.8	ENSMUSG00000023235.15	Ccl25	chr8	protein_coding	chemokine (C-C motif) ligand 25
chr8	4377893	4383123	+	4377893	4403883	A3SS	0.2	50	50	ENSMUST00000155797.8	ENSMUSG00000023235.15	Ccl25	chr8	protein_coding	chemokine (C-C motif) ligand 25
chr8	4377893	4397714	+	4377893	4403883	A3SS	0.2	50	50	ENSMUST00000155797.8	ENSMUSG00000023235.15	Ccl25	chr8	protein_coding	chemokine (C-C motif) ligand 25
chr8	4377893	4398503	+	4377893	4403883	A3SS	0.2	50	50	ENSMUST00000155797.8	ENSMUSG00000023235.15	Ccl25	chr8	protein_coding	chemokine (C-C motif) ligand 25
chr8	4377893	4399606	+	4377893	4398503	3pMXE	0.2	50	50	ENSMUST00000069762.16	ENSMUSG00000023235.15	Ccl25	chr8	protein_coding	chemokine (C-C motif) ligand 25
chr8	4377893	4383123	+	4377893	4398503	A3SS	0.2	50	50	ENSMUST00000069762.16	ENSMUSG00000023235.15	Ccl25	chr8	protein_coding	chemokine (C-C motif) ligand 25
chr8	4377893	4397714	+	4377893	4398503	A3SS	0.2	50	50	ENSMUST00000069762.16	ENSMUSG00000023235.15	Ccl25	chr8	protein_coding	chemokine (C-C motif) ligand 25
chr8	4398340	4398503	+	4377893	4398503	A5SS	0.5	50	50	ENSMUST00000069762.16	ENSMUSG00000023235.15	Ccl25	chr8	protein_coding	chemokine (C-C motif) ligand 25
chr8	4377893	4398503	+	4377893;4398340	4397714;4398503	ES	0.5	50	50	ENSMUST00000098949.11	ENSMUSG00000023235.15	Ccl25	chr8	protein_coding	chemokine (C-C motif) ligand 25
chr8	4377893	4383123	+	4377893	4397714	A3SS	0.33	50	50	ENSMUST00000098949.11	ENSMUSG00000023235.15	Ccl25	chr8	protein_coding	chemokine (C-C motif) ligand 25
chr8	4377893	4383123	+	4377893	4399606	A3SS	0.2	50	50	ENSMUST00000127460.8	ENSMUSG00000023235.15	Ccl25	chr8	protein_coding	chemokine (C-C motif) ligand 25
chr8	4377893	4397714	+	4377893	4399606	A3SS	0.2	50	50	ENSMUST00000127460.8	ENSMUSG00000023235.15	Ccl25	chr8	protein_coding	chemokine (C-C motif) ligand 25
chr8	4377850	4399772	+	4399655	4399772	A5SS&ES	0.5	50	50	ENSMUST00000127460.8	ENSMUSG00000023235.15	Ccl25	chr8	protein_coding	chemokine (C-C motif) ligand 25
chr8	4377893	4403883	+	4399894	4403883	A5SS&ES	0.5	50	50	ENSMUST00000136191.8	ENSMUSG00000023235.15	Ccl25	chr8	protein_coding	chemokine (C-C motif) ligand 25
chr8	4565728;4566990	4566873;4568240	+	4565728	4568240	cassetteExon	0.5	100	100	ENSMUST00000177010.10	ENSMUSG00000008206.17	Cers4	chr8	protein_coding	ceramide synthase 4
chr8	4543169	4543405	+	4543068	4543405	A5SS	0.5	50	50	ENSMUST00000177010.10	ENSMUSG00000008206.17	Cers4	chr8	protein_coding	ceramide synthase 4
chr8	4570308	4573354	+	4571280	4573354	A5SS&ES	0.5	50	50	ENSMUST00000175781.5	ENSMUSG00000008206.17	Cers4	chr8	protein_coding	ceramide synthase 4
chr8	4570308	4570554	+	4570308	4573354	A3SS	0.5	50	50	ENSMUST00000176130.10	ENSMUSG00000008206.17	Cers4	chr8	protein_coding	ceramide synthase 4
chr8	4791966	4798705	-	4791966;4794578	4794447;4798705	ES	0.5	50	50	ENSMUST00000022945.9	ENSMUSG00000022322.9	Shcbp1	chr8	protein_coding	Shc SH2-domain binding protein 1
chr8	4815089	4818144	-	4815089;4818022	4817907;4818144	ES	0.5	50	50	ENSMUST00000022945.9	ENSMUSG00000022322.9	Shcbp1	chr8	protein_coding	Shc SH2-domain binding protein 1
chr8	4818022	4829421	-	4818022;4818311	4818144;4829421	ES	0.5	50	50	ENSMUST00000022945.9	ENSMUSG00000022322.9	Shcbp1	chr8	protein_coding	Shc SH2-domain binding protein 1
chr8	4791966	4798705	-	4791966	4794447	5pMXE	0.5	50	50	ENSMUST00000207665.2	ENSMUSG00000022322.9	Shcbp1	chr8	protein_coding	Shc SH2-domain binding protein 1
chr8	4815089;4818311	4818144;4829421	-	4815089;4818022	4817907;4829421	MXE	0.5	100	100	ENSMUST00000207262.2	ENSMUSG00000022322.9	Shcbp1	chr8	protein_coding	Shc SH2-domain binding protein 1
chr8	4818022	4829421	-	4818311	4829421	A3SS	0.5	50	50	ENSMUST00000207725.2	ENSMUSG00000022322.9	Shcbp1	chr8	protein_coding	Shc SH2-domain binding protein 1
chr8	4815089	4818144	-	4815089	4817907	A5SS	0.5	50	50	ENSMUST00000207725.2	ENSMUSG00000022322.9	Shcbp1	chr8	protein_coding	Shc SH2-domain binding protein 1
chr8	8491468	8534618	-	8471963	8534618	A3SS	0.5	50	50	ENSMUST00000208946.2	ENSMUSG00000109127.2	Gm31135	chr8	lncRNA	predicted gene, 31135
chr8	8672444	8689206	-	8672444;8673240	8673148;8689206	ES	0.5	50	50	ENSMUST00000001319.15	ENSMUSG00000001300.17	Efnb2	chr8	protein_coding	ephrin B2
chr8	8731467;8731948	8731841;8733748	-	8731467	8733748	cassetteExon	0.5	100	100	ENSMUST00000048545.10	ENSMUSG00000040459.12	Arglu1	chr8	protein_coding	arginine and glutamate rich 1
chr8	8731467;8731948	8731891;8733748	-	8731467	8733748	cassetteExon	0.5	100	100	ENSMUST00000048545.10	ENSMUSG00000040459.12	Arglu1	chr8	protein_coding	arginine and glutamate rich 1
chr8	8731467	8731891	-	8731467	8731841	A5SS	0.33	50	50	ENSMUST00000207817.2	ENSMUSG00000040459.12	Arglu1	chr8	protein_coding	arginine and glutamate rich 1
chr8	8731467	8733748	-	8731467	8731891	5pMXE	0.33	50	50	ENSMUST00000207070.2	ENSMUSG00000040459.12	Arglu1	chr8	protein_coding	arginine and glutamate rich 1
chr8	9258032;9259546	9259501;9282934	-	9258032	9282934	cassetteExon	0.5	100	100	ENSMUST00000110969.5	ENSMUSG00000079157.5	Fam155a	chr8	protein_coding	family with sequence similarity 155, member A
chr8	9624786	9820077	-	9283105	9820077	A3SS	0.5	50	50	ENSMUST00000110969.5	ENSMUSG00000079157.5	Fam155a	chr8	protein_coding	family with sequence similarity 155, member A
chr8	9283105	9372887	-	9283105	9820077	A5SS	0.5	50	50	ENSMUST00000110969.5	ENSMUSG00000079157.5	Fam155a	chr8	protein_coding	family with sequence similarity 155, member A
chr8	10023807	10027513	-	10023807	10026031	5pMXE	0.5	50	50	ENSMUST00000095476.6	ENSMUSG00000049717.10	Lig4	chr8	protein_coding	ligase IV, DNA, ATP-dependent
chr8	10028019	10037385	+	10028019;10032970	10032864;10037385	ES	0.5	50	50	ENSMUST00000139793.8	ENSMUSG00000040396.13	Abhd13	chr8	protein_coding	abhydrolase domain containing 13
chr8	10064261	10081310	+	10064261;10071487	10071373;10081310	ES	0.33	50	50	ENSMUST00000208683.2	ENSMUSG00000031497.11	Tnfsf13b	chr8	protein_coding	tumor necrosis factor (ligand) superfamily, member 13b
chr8	10071429	10081310	+	10071487	10081310	A5SS	0.33	50	50	ENSMUST00000208683.2	ENSMUSG00000031497.11	Tnfsf13b	chr8	protein_coding	tumor necrosis factor (ligand) superfamily, member 13b
chr8	10064261	10081310	+	10064261;10071429	10071373;10081310	ES	0.33	50	50	ENSMUST00000207792.3	ENSMUSG00000031497.11	Tnfsf13b	chr8	protein_coding	tumor necrosis factor (ligand) superfamily, member 13b
chr8	10071429	10075870	+	10071429	10081310	A3SS	0.5	50	50	ENSMUST00000207792.3	ENSMUSG00000031497.11	Tnfsf13b	chr8	protein_coding	tumor necrosis factor (ligand) superfamily, member 13b
chr8	10064261	10081310	+	10064261	10071373	3pMXE	0.5	50	50	ENSMUST00000208166.2	ENSMUSG00000031497.11	Tnfsf13b	chr8	protein_coding	tumor necrosis factor (ligand) superfamily, member 13b
chr8	10440239	10448595	+	10440239;10446916	10446851;10448595	ES	0.5	50	50	ENSMUST00000208309.2	ENSMUSG00000039057.12	Myo16	chr8	protein_coding	myosin XVI
chr8	10463290	10485779	+	10463290	10476471	3pMXE	0.5	50	50	ENSMUST00000208309.2	ENSMUSG00000039057.12	Myo16	chr8	protein_coding	myosin XVI
chr8	10299723	10322534	+	10204246	10322534	A5SS	0.5	50	50	ENSMUST00000208309.2	ENSMUSG00000039057.12	Myo16	chr8	protein_coding	myosin XVI
chr8	10485890	10489617	+	10485890	10488799	A3SS&ES	0.5	50	50	ENSMUST00000207477.2	ENSMUSG00000039057.12	Myo16	chr8	protein_coding	myosin XVI
chr8	10740677	10741287	+	10738953	10741287	A5SS	0.5	50	50	ENSMUST00000207379.2	ENSMUSG00000109432.2	Gm44785	chr8	lncRNA	predicted gene 44785
chr8	10924445	10929003	-	10926279	10929003	A3SS&ES	0.5	50	50	ENSMUST00000207718.2	ENSMUSG00000109473.2	B930025P03Rik	chr8	lncRNA	RIKEN cDNA B930025P03 gene
chr8	10929090	10929782	-	10929087	10929782	A3SS	0.5	50	50	ENSMUST00000207718.2	ENSMUSG00000109473.2	B930025P03Rik	chr8	lncRNA	RIKEN cDNA B930025P03 gene
chr8	10976995;10977521	10977285;10978020	-	10976995	10978020	cassetteExon	0.5	100	100	ENSMUST00000040608.5	ENSMUSG00000038917.5	3930402G23Rik	chr8	lncRNA	RIKEN cDNA 3930402G23 gene
chr8	11249882	11252894	-	11249882;11251830	11251658;11252894	ES	0.5	50	50	ENSMUST00000033898.10	ENSMUSG00000031502.12	Col4a1	chr8	protein_coding	collagen, type IV, alpha 1
chr8	11253008;11254552	11254536;11256226	-	11253008	11256226	cassetteExon	0.5	100	100	ENSMUST00000033898.10	ENSMUSG00000031502.12	Col4a1	chr8	protein_coding	collagen, type IV, alpha 1
chr8	11270349	11291122	-	11290067	11291122	A3SS&ES	0.5	50	50	ENSMUST00000033898.10	ENSMUSG00000031502.12	Col4a1	chr8	protein_coding	collagen, type IV, alpha 1
chr8	11282030	11282368	-	11282030	11283828	A5SS	0.5	50	50	ENSMUST00000033898.10	ENSMUSG00000031502.12	Col4a1	chr8	protein_coding	collagen, type IV, alpha 1
chr8	11317656	11329621	-	11317656	11362516	A5SS	0.5	50	50	ENSMUST00000033898.10	ENSMUSG00000031502.12	Col4a1	chr8	protein_coding	collagen, type IV, alpha 1
chr8	11554930	11556707	+	11554930;11555519	11555431;11556707	ES	0.5	50	50	ENSMUST00000177955.8	ENSMUSG00000031505.12	Naxd	chr8	protein_coding	NAD(P)HX dehydratase
chr8	11560347	11562895	+	11560347;11561997	11561877;11562895	ES	0.5	50	50	ENSMUST00000177955.8	ENSMUSG00000031505.12	Naxd	chr8	protein_coding	NAD(P)HX dehydratase
chr8	11547740	11552622	+	11547626	11552622	A5SS	0.5	50	50	ENSMUST00000177955.8	ENSMUSG00000031505.12	Naxd	chr8	protein_coding	NAD(P)HX dehydratase
chr8	11592590;11592977	11592902;11597727	-	11592590	11597727	cassetteExon	0.5	100	100	ENSMUST00000049461.7	ENSMUSG00000056228.11	Cars2	chr8	protein_coding	cysteinyl-tRNA synthetase 2 (mitochondrial)(putative)
chr8	11564186	11564493	-	11564191	11564493	A3SS	0.5	50	50	ENSMUST00000049461.7	ENSMUSG00000056228.11	Cars2	chr8	protein_coding	cysteinyl-tRNA synthetase 2 (mitochondrial)(putative)
chr8	11572208	11576002	-	11568990	11576002	A3SS	0.33	50	50	ENSMUST00000049461.7	ENSMUSG00000056228.11	Cars2	chr8	protein_coding	cysteinyl-tRNA synthetase 2 (mitochondrial)(putative)
chr8	11572218	11576002	-	11568990	11576002	A3SS	0.33	50	50	ENSMUST00000049461.7	ENSMUSG00000056228.11	Cars2	chr8	protein_coding	cysteinyl-tRNA synthetase 2 (mitochondrial)(putative)
chr8	11579885	11580295	-	11579713	11580295	A3SS	0.5	50	50	ENSMUST00000049461.7	ENSMUSG00000056228.11	Cars2	chr8	protein_coding	cysteinyl-tRNA synthetase 2 (mitochondrial)(putative)
chr8	11580424	11587272	-	11580427	11587272	A3SS	0.33	50	50	ENSMUST00000049461.7	ENSMUSG00000056228.11	Cars2	chr8	protein_coding	cysteinyl-tRNA synthetase 2 (mitochondrial)(putative)
chr8	11580618	11587272	-	11580427	11587272	A3SS	0.33	50	50	ENSMUST00000049461.7	ENSMUSG00000056228.11	Cars2	chr8	protein_coding	cysteinyl-tRNA synthetase 2 (mitochondrial)(putative)
chr8	11587351	11591898	-	11587355	11591898	A3SS	0.5	50	50	ENSMUST00000049461.7	ENSMUSG00000056228.11	Cars2	chr8	protein_coding	cysteinyl-tRNA synthetase 2 (mitochondrial)(putative)
chr8	11597087	11597727	-	11592590	11597727	A3SS	0.33	50	50	ENSMUST00000049461.7	ENSMUSG00000056228.11	Cars2	chr8	protein_coding	cysteinyl-tRNA synthetase 2 (mitochondrial)(putative)
chr8	11580424	11587272	-	11580618	11587272	A3SS	0.33	50	50	ENSMUST00000210478.2	ENSMUSG00000056228.11	Cars2	chr8	protein_coding	cysteinyl-tRNA synthetase 2 (mitochondrial)(putative)
chr8	11572208	11576002	-	11572218	11576002	A3SS	0.33	50	50	ENSMUST00000209218.2	ENSMUSG00000056228.11	Cars2	chr8	protein_coding	cysteinyl-tRNA synthetase 2 (mitochondrial)(putative)
chr8	11592977;11597087	11597030;11597727	-	11592977	11597727	cassetteExon	0.5	100	100	ENSMUST00000209236.2	ENSMUSG00000056228.11	Cars2	chr8	protein_coding	cysteinyl-tRNA synthetase 2 (mitochondrial)(putative)
chr8	11592977	11597727	-	11597087	11597727	3pMXE	0.33	50	50	ENSMUST00000210845.2	ENSMUSG00000056228.11	Cars2	chr8	protein_coding	cysteinyl-tRNA synthetase 2 (mitochondrial)(putative)
chr8	11606095	11611418	+	11605978	11611418	A5SS	0.16	50	50	ENSMUST00000211007.2	ENSMUSG00000045969.9	Ing1	chr8	protein_coding	inhibitor of growth family, member 1
chr8	11606200	11611418	+	11605978	11611418	A5SS	0.16	50	50	ENSMUST00000211007.2	ENSMUSG00000045969.9	Ing1	chr8	protein_coding	inhibitor of growth family, member 1
chr8	11607045	11611418	+	11605978	11611418	A5SS	0.16	50	50	ENSMUST00000211007.2	ENSMUSG00000045969.9	Ing1	chr8	protein_coding	inhibitor of growth family, member 1
chr8	11608244	11611418	+	11605978	11611418	A5SS	0.16	50	50	ENSMUST00000211007.2	ENSMUSG00000045969.9	Ing1	chr8	protein_coding	inhibitor of growth family, member 1
chr8	11608566	11611418	+	11605978	11611418	A5SS	0.16	50	50	ENSMUST00000211007.2	ENSMUSG00000045969.9	Ing1	chr8	protein_coding	inhibitor of growth family, member 1
chr8	11606200	11611418	+	11606095	11611418	A5SS	0.16	50	50	ENSMUST00000210740.2	ENSMUSG00000045969.9	Ing1	chr8	protein_coding	inhibitor of growth family, member 1
chr8	11607045	11611418	+	11606095	11611418	A5SS	0.16	50	50	ENSMUST00000210740.2	ENSMUSG00000045969.9	Ing1	chr8	protein_coding	inhibitor of growth family, member 1
chr8	11608244	11611418	+	11606095	11611418	A5SS	0.16	50	50	ENSMUST00000210740.2	ENSMUSG00000045969.9	Ing1	chr8	protein_coding	inhibitor of growth family, member 1
chr8	11608566	11611418	+	11606095	11611418	A5SS	0.16	50	50	ENSMUST00000210740.2	ENSMUSG00000045969.9	Ing1	chr8	protein_coding	inhibitor of growth family, member 1
chr8	11606200	11611418	+	11606200;11607045	11607003;11611418	ES	0.2	50	50	ENSMUST00000210670.2	ENSMUSG00000045969.9	Ing1	chr8	protein_coding	inhibitor of growth family, member 1
chr8	11608244	11611418	+	11607045	11611418	A5SS	0.2	50	50	ENSMUST00000210670.2	ENSMUSG00000045969.9	Ing1	chr8	protein_coding	inhibitor of growth family, member 1
chr8	11608566	11611418	+	11607045	11611418	A5SS	0.2	50	50	ENSMUST00000210670.2	ENSMUSG00000045969.9	Ing1	chr8	protein_coding	inhibitor of growth family, member 1
chr8	11606200	11611418	+	11607045	11611418	A5SS	0.16	50	50	ENSMUST00000054399.6	ENSMUSG00000045969.9	Ing1	chr8	protein_coding	inhibitor of growth family, member 1
chr8	11608244	11611418	+	11606200	11611418	A5SS	0.16	50	50	ENSMUST00000209646.2	ENSMUSG00000045969.9	Ing1	chr8	protein_coding	inhibitor of growth family, member 1
chr8	11608566	11611418	+	11606200	11611418	A5SS	0.16	50	50	ENSMUST00000209646.2	ENSMUSG00000045969.9	Ing1	chr8	protein_coding	inhibitor of growth family, member 1
chr8	11608566	11611418	+	11608244	11611418	A5SS	0.16	50	50	ENSMUST00000210041.2	ENSMUSG00000045969.9	Ing1	chr8	protein_coding	inhibitor of growth family, member 1
chr8	11669297	11678439	-	11669297;11670373	11670262;11678439	ES	0.33	50	50	ENSMUST00000210530.2	ENSMUSG00000031508.15	Ankrd10	chr8	protein_coding	ankyrin repeat domain 10
chr8	11669297;11673858	11673697;11678439	-	11669297;11670373	11670262;11678439	MXE	0.5	100	100	ENSMUST00000210530.2	ENSMUSG00000031508.15	Ankrd10	chr8	protein_coding	ankyrin repeat domain 10
chr8	11683018	11683653	-	11683018	11685411	A5SS	0.33	50	50	ENSMUST00000210530.2	ENSMUSG00000031508.15	Ankrd10	chr8	protein_coding	ankyrin repeat domain 10
chr8	11683018	11684811	-	11683018	11685411	A5SS	0.33	50	50	ENSMUST00000210530.2	ENSMUSG00000031508.15	Ankrd10	chr8	protein_coding	ankyrin repeat domain 10
chr8	11669297;11673858	11673697;11678439	-	11669297	11678439	cassetteExon	0.5	100	100	ENSMUST00000169782.3	ENSMUSG00000031508.15	Ankrd10	chr8	protein_coding	ankyrin repeat domain 10
chr8	11669297	11678439	-	11669297	11673697	5pMXE	0.33	50	50	ENSMUST00000211690.2	ENSMUSG00000031508.15	Ankrd10	chr8	protein_coding	ankyrin repeat domain 10
chr8	11669297	11670262	-	11669297	11673697	A5SS	0.33	50	50	ENSMUST00000211690.2	ENSMUSG00000031508.15	Ankrd10	chr8	protein_coding	ankyrin repeat domain 10
chr8	11683018	11683653	-	11683018	11684811	A5SS	0.33	50	50	ENSMUST00000211445.2	ENSMUSG00000031508.15	Ankrd10	chr8	protein_coding	ankyrin repeat domain 10
chr8	11706189	11712590	-	11706189;11711755	11711672;11712590	ES	0.5	50	50	ENSMUST00000033906.11	ENSMUSG00000031509.11	1700016D06Rik	chr8	protein_coding	RIKEN cDNA 1700016D06 gene
chr8	11715098	11750991	-	11715098	11728576	5pMXE	0.5	50	50	ENSMUST00000033906.11	ENSMUSG00000031509.11	1700016D06Rik	chr8	protein_coding	RIKEN cDNA 1700016D06 gene
chr8	11712773	11715036	-	11712691	11715036	A3SS	0.5	50	50	ENSMUST00000033906.11	ENSMUSG00000031509.11	1700016D06Rik	chr8	protein_coding	RIKEN cDNA 1700016D06 gene
chr8	11706189	11710542	-	11706189	11711672	A5SS	0.33	50	50	ENSMUST00000033906.11	ENSMUSG00000031509.11	1700016D06Rik	chr8	protein_coding	RIKEN cDNA 1700016D06 gene
chr8	11706189	11712590	-	11706189	11710542	5pMXE	0.33	50	50	ENSMUST00000190787.2	ENSMUSG00000031509.11	1700016D06Rik	chr8	protein_coding	RIKEN cDNA 1700016D06 gene
chr8	11865300	11869638	+	11865300;11867884	11867660;11869638	ES	0.5	50	50	ENSMUST00000110909.9	ENSMUSG00000031511.17	Arhgef7	chr8	protein_coding	Rho guanine nucleotide exchange factor (GEF7)
chr8	11872049	11881493	+	11872049	11874505	3pMXE	0.5	50	50	ENSMUST00000110909.9	ENSMUSG00000031511.17	Arhgef7	chr8	protein_coding	Rho guanine nucleotide exchange factor (GEF7)
chr8	11832655;11832932	11832832;11835713	+	11832655	11835713	cassetteExon	0.5	100	100	ENSMUST00000110909.9	ENSMUSG00000031511.17	Arhgef7	chr8	protein_coding	Rho guanine nucleotide exchange factor (GEF7)
chr8	11865300	11865631	+	11865300	11867660	A3SS	0.25	50	50	ENSMUST00000110909.9	ENSMUSG00000031511.17	Arhgef7	chr8	protein_coding	Rho guanine nucleotide exchange factor (GEF7)
chr8	11865300	11865791	+	11865300	11867660	A3SS	0.25	50	50	ENSMUST00000110909.9	ENSMUSG00000031511.17	Arhgef7	chr8	protein_coding	Rho guanine nucleotide exchange factor (GEF7)
chr8	11847576	11850460	+	11841544	11850460	A5SS	0.5	50	50	ENSMUST00000110909.9	ENSMUSG00000031511.17	Arhgef7	chr8	protein_coding	Rho guanine nucleotide exchange factor (GEF7)
chr8	11808517	11835713	+	11808517;11832655	11831155;11835713	ES	0.33	50	50	ENSMUST00000209686.2	ENSMUSG00000031511.17	Arhgef7	chr8	protein_coding	Rho guanine nucleotide exchange factor (GEF7)
chr8	11872049;11874681	11874505;11881493	+	11872049	11881493	cassetteExon	0.5	100	100	ENSMUST00000074856.13	ENSMUSG00000031511.17	Arhgef7	chr8	protein_coding	Rho guanine nucleotide exchange factor (GEF7)
chr8	11808517	11831155	+	11808517	11835713	A3SS	0.5	50	50	ENSMUST00000210012.2	ENSMUSG00000031511.17	Arhgef7	chr8	protein_coding	Rho guanine nucleotide exchange factor (GEF7)
chr8	11832655	11835713	+	11808517	11835713	A5SS	0.33	50	50	ENSMUST00000210012.2	ENSMUSG00000031511.17	Arhgef7	chr8	protein_coding	Rho guanine nucleotide exchange factor (GEF7)
chr8	11832932	11835713	+	11808517	11835713	A5SS	0.33	50	50	ENSMUST00000210012.2	ENSMUSG00000031511.17	Arhgef7	chr8	protein_coding	Rho guanine nucleotide exchange factor (GEF7)
chr8	11865300	11865631	+	11865300	11869638	A3SS	0.25	50	50	ENSMUST00000110904.2	ENSMUSG00000031511.17	Arhgef7	chr8	protein_coding	Rho guanine nucleotide exchange factor (GEF7)
chr8	11865300	11865791	+	11865300	11869638	A3SS	0.25	50	50	ENSMUST00000110904.2	ENSMUSG00000031511.17	Arhgef7	chr8	protein_coding	Rho guanine nucleotide exchange factor (GEF7)
chr8	11865300	11865631	+	11865300	11865791	A3SS	0.25	50	50	ENSMUST00000154204.2	ENSMUSG00000031511.17	Arhgef7	chr8	protein_coding	Rho guanine nucleotide exchange factor (GEF7)
chr8	11890976;11892162	11891997;11904155	+	11890976;11903194	11894152;11904155	MXE	0.5	100	100	ENSMUST00000033909.14	ENSMUSG00000031512.16	Tex29	chr8	protein_coding	testis expressed 29
chr8	11894262;11897599	11897451;11903125	+	11894262	11903125	cassetteExon	0.5	100	100	ENSMUST00000033909.14	ENSMUSG00000031512.16	Tex29	chr8	protein_coding	testis expressed 29
chr8	11890976	11894027	+	11890976	11894152	A3SS	0.33	50	50	ENSMUST00000033909.14	ENSMUSG00000031512.16	Tex29	chr8	protein_coding	testis expressed 29
chr8	11890976;11892162	11891997;11904155	+	11890976;11903194	11894027;11904155	MXE	0.5	100	100	ENSMUST00000209692.2	ENSMUSG00000031512.16	Tex29	chr8	protein_coding	testis expressed 29
chr8	11892162	11904155	+	11892162	11894030	3pMXE	0.5	50	50	ENSMUST00000144007.2	ENSMUSG00000031512.16	Tex29	chr8	protein_coding	testis expressed 29
chr8	11890976	11894027	+	11890976	11891997	A3SS&ES	0.33	50	50	ENSMUST00000144007.2	ENSMUSG00000031512.16	Tex29	chr8	protein_coding	testis expressed 29
chr8	11890976	11894152	+	11890976	11891997	A3SS&ES	0.33	50	50	ENSMUST00000144007.2	ENSMUSG00000031512.16	Tex29	chr8	protein_coding	testis expressed 29
chr8	11903194	11904155	+	11892162	11904155	A5SS	0.5	50	50	ENSMUST00000132536.2	ENSMUSG00000031512.16	Tex29	chr8	protein_coding	testis expressed 29
chr8	12623199	12630944	+	12623199;12629933	12629742;12630944	ES	0.5	50	50	ENSMUST00000211182.2	ENSMUSG00000010435.8	Spaca7	chr8	protein_coding	sperm acrosome associated 7
chr8	12636539;12639276	12639205;12648944	+	12636539	12648944	cassetteExon	0.5	100	100	ENSMUST00000211182.2	ENSMUSG00000010435.8	Spaca7	chr8	protein_coding	sperm acrosome associated 7
chr8	12636539;12639276	12639209;12648944	+	12636539	12648944	cassetteExon	0.5	100	100	ENSMUST00000211182.2	ENSMUSG00000010435.8	Spaca7	chr8	protein_coding	sperm acrosome associated 7
chr8	12636539	12639209	+	12636539	12639205	A3SS	0.33	50	50	ENSMUST00000210424.2	ENSMUSG00000010435.8	Spaca7	chr8	protein_coding	sperm acrosome associated 7
chr8	12698787;12699822	12699690;12700154	-	12698787	12700154	cassetteExon	0.5	100	100	ENSMUST00000164774.8	ENSMUSG00000000759.15	Tubgcp3	chr8	protein_coding	tubulin, gamma complex associated protein 3
chr8	12705974	12707446	-	12705978	12707446	A3SS	0.5	50	50	ENSMUST00000164774.8	ENSMUSG00000000759.15	Tubgcp3	chr8	protein_coding	tubulin, gamma complex associated protein 3
chr8	12705978	12711300	-	12705978	12707446	5pMXE	0.5	50	50	ENSMUST00000164971.8	ENSMUSG00000000759.15	Tubgcp3	chr8	protein_coding	tubulin, gamma complex associated protein 3
chr8	12698787	12700154	-	12699822	12700154	A3SS	0.5	50	50	ENSMUST00000164971.8	ENSMUSG00000000759.15	Tubgcp3	chr8	protein_coding	tubulin, gamma complex associated protein 3
chr8	12708377	12711300	-	12705978	12711300	A3SS	0.5	50	50	ENSMUST00000172056.2	ENSMUSG00000000759.15	Tubgcp3	chr8	protein_coding	tubulin, gamma complex associated protein 3
chr8	12909479	12914920	+	12909479;12913862	12913759;12914920	ES	0.33	50	50	ENSMUST00000033818.10	ENSMUSG00000031441.16	Atp11a	chr8	protein_coding	ATPase, class VI, type 11A
chr8	12909479;12911724	12911640;12914920	+	12909479;12913862	12913759;12914920	MXE	0.5	100	100	ENSMUST00000033818.10	ENSMUSG00000031441.16	Atp11a	chr8	protein_coding	ATPase, class VI, type 11A
chr8	12901172	12901633	+	12901172	12906934	A3SS	0.5	50	50	ENSMUST00000033818.10	ENSMUSG00000031441.16	Atp11a	chr8	protein_coding	ATPase, class VI, type 11A
chr8	12909479	12911912	+	12909479	12913759	A3SS	0.25	50	50	ENSMUST00000033818.10	ENSMUSG00000031441.16	Atp11a	chr8	protein_coding	ATPase, class VI, type 11A
chr8	12876612	12877448	+	12876406	12877448	A5SS	0.5	50	50	ENSMUST00000033818.10	ENSMUSG00000031441.16	Atp11a	chr8	protein_coding	ATPase, class VI, type 11A
chr8	12909479;12911724	12911640;12914920	+	12909479	12914920	cassetteExon	0.5	100	100	ENSMUST00000091237.12	ENSMUSG00000031441.16	Atp11a	chr8	protein_coding	ATPase, class VI, type 11A
chr8	12909479	12911912	+	12909479	12914920	A3SS	0.25	50	50	ENSMUST00000091237.12	ENSMUSG00000031441.16	Atp11a	chr8	protein_coding	ATPase, class VI, type 11A
chr8	12909479	12911912	+	12909479	12911640	A3SS&ES	0.25	50	50	ENSMUST00000132974.8	ENSMUSG00000031441.16	Atp11a	chr8	protein_coding	ATPase, class VI, type 11A
chr8	12911724	12911912	+	12911724	12914920	A3SS	0.5	50	50	ENSMUST00000132974.8	ENSMUSG00000031441.16	Atp11a	chr8	protein_coding	ATPase, class VI, type 11A
chr8	12909479;12911724	12911640;12911912	+	12909479	12911912	cassetteExon	0.5	100	100	ENSMUST00000143359.8	ENSMUSG00000031441.16	Atp11a	chr8	protein_coding	ATPase, class VI, type 11A
chr8	12909479	12914920	+	12911724	12914920	5pMXE	0.33	50	50	ENSMUST00000139545.2	ENSMUSG00000031441.16	Atp11a	chr8	protein_coding	ATPase, class VI, type 11A
chr8	12913862	12914920	+	12911724	12914920	A5SS	0.33	50	50	ENSMUST00000139545.2	ENSMUSG00000031441.16	Atp11a	chr8	protein_coding	ATPase, class VI, type 11A
chr8	12881416	12883768	-	12881416	12881870	5pMXE	0.5	50	50	ENSMUST00000147398.8	ENSMUSG00000084780.8	Gm15350	chr8	lncRNA	predicted gene 15350
chr8	12924016	12929882	+	12924061	12929882	A5SS	0.5	50	50	ENSMUST00000156560.2	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	13063650;13064007	13063737;13067347	+	13063650	13067347	cassetteExon	0.5	100	100	ENSMUST00000095456.10	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	13063650;13064007	13063915;13067347	+	13063650	13067347	cassetteExon	0.5	100	100	ENSMUST00000095456.10	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	13063650;13064893	13064819;13067347	+	13063650	13067347	cassetteExon	0.5	100	100	ENSMUST00000095456.10	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	12930150	12940062	+	12930150	13013164	A3SS	0.5	50	50	ENSMUST00000095456.10	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	13034950	13041645	+	13034950	13043829	A3SS	0.5	50	50	ENSMUST00000095456.10	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	12965495	13013164	+	12930150	13013164	A5SS	0.14	50	50	ENSMUST00000095456.10	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	12966054	13013164	+	12930150	13013164	A5SS	0.14	50	50	ENSMUST00000095456.10	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	12976733	13013164	+	12930150	13013164	A5SS	0.14	50	50	ENSMUST00000095456.10	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	12981885	13013164	+	12930150	13013164	A5SS	0.14	50	50	ENSMUST00000095456.10	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	12998186	13013164	+	12930150	13013164	A5SS	0.14	50	50	ENSMUST00000095456.10	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	12999676	13013164	+	12930150	13013164	A5SS	0.14	50	50	ENSMUST00000095456.10	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	13034514	13034860	+	13023093	13034860	A5SS	0.33	50	50	ENSMUST00000095456.10	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	13034647	13034860	+	13023093	13034860	A5SS	0.33	50	50	ENSMUST00000095456.10	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	12966054	13013164	+	12965495	13013164	A5SS	0.14	50	50	ENSMUST00000173099.8	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	12976733	13013164	+	12965495	13013164	A5SS	0.14	50	50	ENSMUST00000173099.8	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	12981885	13013164	+	12965495	13013164	A5SS	0.14	50	50	ENSMUST00000173099.8	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	12998186	13013164	+	12965495	13013164	A5SS	0.14	50	50	ENSMUST00000173099.8	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	12999676	13013164	+	12965495	13013164	A5SS	0.14	50	50	ENSMUST00000173099.8	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	13063650	13064819	+	13063650;13064007	13063915;13064819	ES	0.33	50	50	ENSMUST00000110876.9	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	13064007	13067347	+	13064007;13064893	13064819;13067347	ES	0.33	50	50	ENSMUST00000110876.9	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	13063650	13063737	+	13063650	13063915	A3SS	0.25	50	50	ENSMUST00000110876.9	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	12976733	13013164	+	12966054	13013164	A5SS	0.14	50	50	ENSMUST00000110876.9	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	12981885	13013164	+	12966054	13013164	A5SS	0.14	50	50	ENSMUST00000110876.9	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	12998186	13013164	+	12966054	13013164	A5SS	0.14	50	50	ENSMUST00000110876.9	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	12999676	13013164	+	12966054	13013164	A5SS	0.14	50	50	ENSMUST00000110876.9	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	13063998	13064819	+	13064007	13064819	A5SS	0.33	50	50	ENSMUST00000110876.9	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	13068799	13068886	+	13068799	13068939	A3SS	0.5	50	50	ENSMUST00000110879.9	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	12981885	13013164	+	12976733	13013164	A5SS	0.14	50	50	ENSMUST00000098927.10	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	12998186	13013164	+	12976733	13013164	A5SS	0.14	50	50	ENSMUST00000098927.10	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	12999676	13013164	+	12976733	13013164	A5SS	0.14	50	50	ENSMUST00000098927.10	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	12998186	13013164	+	12981885	13013164	A5SS	0.14	50	50	ENSMUST00000238472.2	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	12999676	13013164	+	12981885	13013164	A5SS	0.14	50	50	ENSMUST00000238472.2	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	12999676	13013164	+	12998186	13013164	A5SS	0.14	50	50	ENSMUST00000130302.2	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	13063650	13064819	+	13063650	13063737	3pMXE	0.25	50	50	ENSMUST00000110871.8	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	13063650	13067347	+	13063650	13063737	3pMXE	0.25	50	50	ENSMUST00000110871.8	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	13034514	13034860	+	13034647	13034860	A5SS	0.33	50	50	ENSMUST00000110873.10	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	13063650;13063998	13063737;13064819	+	13063650	13064819	cassetteExon	0.5	100	100	ENSMUST00000126905.8	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	13063650;13064007	13063737;13064819	+	13063650	13064819	cassetteExon	0.5	100	100	ENSMUST00000126905.8	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	13063650;13064007	13063737;13067347	+	13063650;13064893	13064819;13067347	MXE	0.5	100	100	ENSMUST00000126905.8	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	13063650;13063998	13063915;13064819	+	13063650	13064819	cassetteExon	0.5	100	100	ENSMUST00000126905.8	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	13063650;13064007	13063915;13067347	+	13063650;13064893	13064819;13067347	MXE	0.5	100	100	ENSMUST00000126905.8	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	13064007	13067347	+	13064893	13067347	A5SS&ES	0.33	50	50	ENSMUST00000134227.8	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	13063650	13067347	+	13063650	13064819	3pMXE	0.25	50	50	ENSMUST00000127229.2	ENSMUSG00000031442.22	Mcf2l	chr8	protein_coding	mcf.2 transforming sequence-like
chr8	12930281	12933602	-	12930281;12931886	12931714;12933602	ES	0.5	50	50	ENSMUST00000110860.2	ENSMUSG00000079146.3	Gm15353	chr8	lncRNA	predicted gene 15353
chr8	12962595	12965423	-	12949367	12965423	A3SS	0.33	50	50	ENSMUST00000123920.2	ENSMUSG00000086770.2	Gm15351	chr8	lncRNA	predicted gene 15351
chr8	12964801	12965423	-	12949367	12965423	A3SS	0.33	50	50	ENSMUST00000123920.2	ENSMUSG00000086770.2	Gm15351	chr8	lncRNA	predicted gene 15351
chr8	12964801	12965423	-	12962595	12965423	A3SS	0.33	50	50	ENSMUST00000153095.2	ENSMUSG00000086770.2	Gm15351	chr8	lncRNA	predicted gene 15351
chr8	13087547	13087625	+	13087547	13087815	A3SS	0.5	50	50	ENSMUST00000063820.12	ENSMUSG00000031444.17	F10	chr8	protein_coding	coagulation factor X
chr8	13103463	13105293	+	13103473	13105293	A5SS	0.33	50	50	ENSMUST00000063820.12	ENSMUSG00000031444.17	F10	chr8	protein_coding	coagulation factor X
chr8	13103469	13105293	+	13103473	13105293	A5SS	0.33	50	50	ENSMUST00000063820.12	ENSMUSG00000031444.17	F10	chr8	protein_coding	coagulation factor X
chr8	13103463	13105293	+	13103469	13105293	A5SS	0.33	50	50	ENSMUST00000128418.8	ENSMUSG00000031444.17	F10	chr8	protein_coding	coagulation factor X
chr8	13122593	13123437	+	13122593	13123096	3pMXE	0.5	50	50	ENSMUST00000211363.2	ENSMUSG00000031445.6	Proz	chr8	protein_coding	protein Z, vitamin K-dependent plasma glycoprotein
chr8	13113568	13114602	+	13113414	13114602	A5SS	0.5	50	50	ENSMUST00000211363.2	ENSMUSG00000031445.6	Proz	chr8	protein_coding	protein Z, vitamin K-dependent plasma glycoprotein
chr8	13136326	13144143	-	13136326;13140760	13140657;13144143	ES	0.5	50	50	ENSMUST00000168164.8	ENSMUSG00000038542.15	Pcid2	chr8	protein_coding	PCI domain containing 2
chr8	13148636	13150325	-	13144197	13150325	A3SS	0.5	50	50	ENSMUST00000168164.8	ENSMUSG00000038542.15	Pcid2	chr8	protein_coding	PCI domain containing 2
chr8	13136326	13136559	-	13136326	13140657	A5SS	0.33	50	50	ENSMUST00000168164.8	ENSMUSG00000038542.15	Pcid2	chr8	protein_coding	PCI domain containing 2
chr8	13144197	13145831	-	13144197	13150325	A5SS	0.5	50	50	ENSMUST00000168164.8	ENSMUSG00000038542.15	Pcid2	chr8	protein_coding	PCI domain containing 2
chr8	13147668;13148065	13147967;13148563	-	13147668	13148563	cassetteExon	0.5	100	100	ENSMUST00000164416.8	ENSMUSG00000038542.15	Pcid2	chr8	protein_coding	PCI domain containing 2
chr8	13136326	13144143	-	13136326	13136559	5pMXE	0.33	50	50	ENSMUST00000165097.8	ENSMUSG00000038542.15	Pcid2	chr8	protein_coding	PCI domain containing 2
chr8	13192598	13194277	+	13192598;13193134	13192962;13194277	ES	0.5	50	50	ENSMUST00000016680.14	ENSMUSG00000031446.15	Cul4a	chr8	protein_coding	cullin 4A
chr8	13173959;13174684	13174560;13174791	+	13173959	13174791	cassetteExon	0.5	100	100	ENSMUST00000016680.14	ENSMUSG00000031446.15	Cul4a	chr8	protein_coding	cullin 4A
chr8	13239747	13250049	-	13239747;13242208	13242050;13250049	ES	0.5	50	50	ENSMUST00000209895.2	ENSMUSG00000038515.11	Grtp1	chr8	protein_coding	GH regulated TBC protein 1
chr8	13236979;13238560	13238510;13239623	-	13236979	13239623	cassetteExon	0.5	100	100	ENSMUST00000209895.2	ENSMUSG00000038515.11	Grtp1	chr8	protein_coding	GH regulated TBC protein 1
chr8	13229508	13229583	-	13222612	13229583	A3SS	0.5	50	50	ENSMUST00000209895.2	ENSMUSG00000038515.11	Grtp1	chr8	protein_coding	GH regulated TBC protein 1
chr8	13229755	13236883	-	13229759	13236883	A3SS	0.5	50	50	ENSMUST00000209895.2	ENSMUSG00000038515.11	Grtp1	chr8	protein_coding	GH regulated TBC protein 1
chr8	13227142;13228917	13228806;13229323	-	13227142	13229323	cassetteExon	0.5	100	100	ENSMUST00000210317.2	ENSMUSG00000038515.11	Grtp1	chr8	protein_coding	GH regulated TBC protein 1
chr8	13227142;13228947	13228806;13229323	-	13227142	13229323	cassetteExon	0.5	100	100	ENSMUST00000210317.2	ENSMUSG00000038515.11	Grtp1	chr8	protein_coding	GH regulated TBC protein 1
chr8	13228947	13229323	-	13228917	13229323	A3SS	0.33	50	50	ENSMUST00000209516.2	ENSMUSG00000038515.11	Grtp1	chr8	protein_coding	GH regulated TBC protein 1
chr8	13239747	13250049	-	13239747	13242050	5pMXE	0.5	50	50	ENSMUST00000209465.2	ENSMUSG00000038515.11	Grtp1	chr8	protein_coding	GH regulated TBC protein 1
chr8	13227142	13229323	-	13228947	13229323	3pMXE	0.33	50	50	ENSMUST00000211128.2	ENSMUSG00000038515.11	Grtp1	chr8	protein_coding	GH regulated TBC protein 1
chr8	13251293;13251725	13251688;13257364	+	13251293	13257364	cassetteExon	0.5	100	100	ENSMUST00000190673.2	ENSMUSG00000099338.2	2810030D12Rik	chr8	lncRNA	RIKEN cDNA 2810030D12 gene
chr8	13251293	13257526	+	13251293	13257364	A3SS	0.33	50	50	ENSMUST00000190673.2	ENSMUSG00000099338.2	2810030D12Rik	chr8	lncRNA	RIKEN cDNA 2810030D12 gene
chr8	13251293	13251688	+	13251293	13257526	A3SS	0.33	50	50	ENSMUST00000185622.2	ENSMUSG00000099338.2	2810030D12Rik	chr8	lncRNA	RIKEN cDNA 2810030D12 gene
chr8	13296167	13303818	-	13296167;13298717	13298553;13303818	ES	0.5	50	50	ENSMUST00000204916.3	ENSMUSG00000031448.13	Adprhl1	chr8	protein_coding	ADP-ribosylhydrolase like 1
chr8	13298717	13304051	-	13298717	13303818	A5SS	0.5	50	50	ENSMUST00000204916.3	ENSMUSG00000031448.13	Adprhl1	chr8	protein_coding	ADP-ribosylhydrolase like 1
chr8	13296167	13303818	-	13296167	13298553	A5SS&ES	0.5	50	50	ENSMUST00000171619.2	ENSMUSG00000031448.13	Adprhl1	chr8	protein_coding	ADP-ribosylhydrolase like 1
chr8	13307976;13309043	13308947;13321590	-	13307976	13321590	cassetteExon	0.5	100	100	ENSMUST00000110840.8	ENSMUSG00000038506.14	Dcun1d2	chr8	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)
chr8	13307976;13311467	13311385;13321590	-	13307976	13321590	cassetteExon	0.5	100	100	ENSMUST00000110840.8	ENSMUSG00000038506.14	Dcun1d2	chr8	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)
chr8	13328685	13330917	-	13328685	13330909	A5SS	0.5	50	50	ENSMUST00000110840.8	ENSMUSG00000038506.14	Dcun1d2	chr8	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)
chr8	13307976;13309043	13308947;13311385	-	13307976	13311385	cassetteExon	0.5	100	100	ENSMUST00000110839.10	ENSMUSG00000038506.14	Dcun1d2	chr8	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)
chr8	13307976;13309043	13308947;13321590	-	13307976;13311467	13311385;13321590	MXE	0.5	100	100	ENSMUST00000110839.10	ENSMUSG00000038506.14	Dcun1d2	chr8	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)
chr8	13309043	13321590	-	13309043;13311467	13311385;13321590	ES	0.33	50	50	ENSMUST00000203467.3	ENSMUSG00000038506.14	Dcun1d2	chr8	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)
chr8	13331125	13337804	-	13321720	13337804	A3SS	0.5	50	50	ENSMUST00000204673.2	ENSMUSG00000038506.14	Dcun1d2	chr8	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)
chr8	13321720	13328517	-	13321720	13337804	A5SS	0.5	50	50	ENSMUST00000204673.2	ENSMUSG00000038506.14	Dcun1d2	chr8	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)
chr8	13307976	13321590	-	13311467	13321590	3pMXE	0.33	50	50	ENSMUST00000203604.2	ENSMUSG00000038506.14	Dcun1d2	chr8	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)
chr8	13309043	13321590	-	13311467	13321590	3pMXE	0.33	50	50	ENSMUST00000203604.2	ENSMUSG00000038506.14	Dcun1d2	chr8	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)
chr8	13344502	13344846	+	13342889	13344846	A5SS	0.5	50	50	ENSMUST00000210063.2	ENSMUSG00000038497.8	Tmco3	chr8	protein_coding	transmembrane and coiled-coil domains 3
chr8	13363956	13369763	+	13363956;13368922	13368843;13369763	ES	0.5	50	50	ENSMUST00000045229.7	ENSMUSG00000038497.8	Tmco3	chr8	protein_coding	transmembrane and coiled-coil domains 3
chr8	13363956;13364650	13364558;13368843	+	13363956	13368843	cassetteExon	0.5	100	100	ENSMUST00000045229.7	ENSMUSG00000038497.8	Tmco3	chr8	protein_coding	transmembrane and coiled-coil domains 3
chr8	13346108	13346608	+	13346108	13348213	A3SS	0.5	50	50	ENSMUST00000045229.7	ENSMUSG00000038497.8	Tmco3	chr8	protein_coding	transmembrane and coiled-coil domains 3
chr8	13363540	13363806	+	13360340	13363806	A5SS	0.5	50	50	ENSMUST00000045229.7	ENSMUSG00000038497.8	Tmco3	chr8	protein_coding	transmembrane and coiled-coil domains 3
chr8	13367826	13368843	+	13363956	13368843	A5SS	0.33	50	50	ENSMUST00000045229.7	ENSMUSG00000038497.8	Tmco3	chr8	protein_coding	transmembrane and coiled-coil domains 3
chr8	13363956	13364558	+	13363956	13369763	A3SS	0.33	50	50	ENSMUST00000210600.2	ENSMUSG00000038497.8	Tmco3	chr8	protein_coding	transmembrane and coiled-coil domains 3
chr8	13367826	13368843	+	13364650	13368843	A5SS	0.33	50	50	ENSMUST00000210762.2	ENSMUSG00000038497.8	Tmco3	chr8	protein_coding	transmembrane and coiled-coil domains 3
chr8	13389739	13415089	+	13389739;13407109	13407043;13415089	ES	0.5	50	50	ENSMUST00000209885.2	ENSMUSG00000038482.12	Tfdp1	chr8	protein_coding	transcription factor Dp 1
chr8	13420646	13421352	+	13420646;13421022	13420879;13421352	ES	0.5	50	50	ENSMUST00000209885.2	ENSMUSG00000038482.12	Tfdp1	chr8	protein_coding	transcription factor Dp 1
chr8	13419580;13420274	13420169;13420481	+	13419580	13420481	cassetteExon	0.5	100	100	ENSMUST00000209885.2	ENSMUSG00000038482.12	Tfdp1	chr8	protein_coding	transcription factor Dp 1
chr8	13388911	13389665	+	13388806	13389665	A5SS	0.25	50	50	ENSMUST00000209885.2	ENSMUSG00000038482.12	Tfdp1	chr8	protein_coding	transcription factor Dp 1
chr8	13388920	13389665	+	13388806	13389665	A5SS	0.25	50	50	ENSMUST00000209885.2	ENSMUSG00000038482.12	Tfdp1	chr8	protein_coding	transcription factor Dp 1
chr8	13389440	13389665	+	13388806	13389665	A5SS	0.25	50	50	ENSMUST00000209885.2	ENSMUSG00000038482.12	Tfdp1	chr8	protein_coding	transcription factor Dp 1
chr8	13389739	13419459	+	13389739;13415195	13415089;13419459	ES	0.5	50	50	ENSMUST00000209396.2	ENSMUSG00000038482.12	Tfdp1	chr8	protein_coding	transcription factor Dp 1
chr8	13388920	13389665	+	13388911	13389665	A5SS	0.25	50	50	ENSMUST00000210501.2	ENSMUSG00000038482.12	Tfdp1	chr8	protein_coding	transcription factor Dp 1
chr8	13389440	13389665	+	13388911	13389665	A5SS	0.25	50	50	ENSMUST00000210501.2	ENSMUSG00000038482.12	Tfdp1	chr8	protein_coding	transcription factor Dp 1
chr8	13389440	13389665	+	13388920	13389665	A5SS	0.25	50	50	ENSMUST00000211606.2	ENSMUSG00000038482.12	Tfdp1	chr8	protein_coding	transcription factor Dp 1
chr8	13420646	13421352	+	13421022	13421352	A5SS	0.5	50	50	ENSMUST00000211606.2	ENSMUSG00000038482.12	Tfdp1	chr8	protein_coding	transcription factor Dp 1
chr8	13420646	13421352	+	13420646	13420879	3pMXE	0.5	50	50	ENSMUST00000210165.2	ENSMUSG00000038482.12	Tfdp1	chr8	protein_coding	transcription factor Dp 1
chr8	13389739	13407043	+	13389739	13419459	A3SS	0.33	50	50	ENSMUST00000210165.2	ENSMUSG00000038482.12	Tfdp1	chr8	protein_coding	transcription factor Dp 1
chr8	13389739	13419459	+	13415195	13419459	5pMXE	0.5	50	50	ENSMUST00000210518.2	ENSMUSG00000038482.12	Tfdp1	chr8	protein_coding	transcription factor Dp 1
chr8	13491280;13494049	13493987;13501026	+	13491280	13501026	cassetteExon	0.5	100	100	ENSMUST00000211356.2	ENSMUSG00000038457.18	Tmem255b	chr8	protein_coding	transmembrane protein 255B
chr8	13505214;13506072	13505913;13506951	+	13505214	13506951	cassetteExon	0.5	100	100	ENSMUST00000211356.2	ENSMUSG00000038457.18	Tmem255b	chr8	protein_coding	transmembrane protein 255B
chr8	13507094	13511205	+	13507094	13518331	A3SS	0.5	50	50	ENSMUST00000211356.2	ENSMUSG00000038457.18	Tmem255b	chr8	protein_coding	transmembrane protein 255B
chr8	13485667	13491138	+	13485247	13491138	A5SS	0.5	50	50	ENSMUST00000211356.2	ENSMUSG00000038457.18	Tmem255b	chr8	protein_coding	transmembrane protein 255B
chr8	13485667	13501026	+	13491280	13501026	A5SS&ES	0.33	50	50	ENSMUST00000211356.2	ENSMUSG00000038457.18	Tmem255b	chr8	protein_coding	transmembrane protein 255B
chr8	13505631	13505913	+	13505214	13505913	A5SS	0.5	50	50	ENSMUST00000167505.3	ENSMUSG00000038457.18	Tmem255b	chr8	protein_coding	transmembrane protein 255B
chr8	13485667	13501026	+	13485667;13491280	13491138;13501026	ES	0.33	50	50	ENSMUST00000167071.9	ENSMUSG00000038457.18	Tmem255b	chr8	protein_coding	transmembrane protein 255B
chr8	13494049	13501026	+	13485667	13501026	A5SS	0.33	50	50	ENSMUST00000210804.2	ENSMUSG00000038457.18	Tmem255b	chr8	protein_coding	transmembrane protein 255B
chr8	13601716	13604654	-	13601921	13604654	A3SS	0.33	50	50	ENSMUST00000187391.7	ENSMUSG00000031452.16	1700029H14Rik	chr8	protein_coding	RIKEN cDNA 1700029H14 gene
chr8	13601832	13604654	-	13601921	13604654	A3SS	0.33	50	50	ENSMUST00000187391.7	ENSMUSG00000031452.16	1700029H14Rik	chr8	protein_coding	RIKEN cDNA 1700029H14 gene
chr8	13601716	13604654	-	13601832	13604654	A3SS	0.33	50	50	ENSMUST00000134023.9	ENSMUSG00000031452.16	1700029H14Rik	chr8	protein_coding	RIKEN cDNA 1700029H14 gene
chr8	13607702;13608921	13608625;13610082	-	13607702	13610082	cassetteExon	0.5	100	100	ENSMUST00000132787.2	ENSMUSG00000031452.16	1700029H14Rik	chr8	protein_coding	RIKEN cDNA 1700029H14 gene
chr8	13681892;13710022	13709939;13727393	-	13681892	13727393	cassetteExon	0.5	100	100	ENSMUST00000117551.4	ENSMUSG00000031453.17	Rasa3	chr8	protein_coding	RAS p21 protein activator 3
chr8	13786021;13788488	13788319;13792654	+	13786021	13792654	cassetteExon	0.5	100	100	ENSMUST00000166277.5	ENSMUSG00000090336.6	Cfap97d2	chr8	protein_coding	CFAP97 domain containing 2
chr8	13786021;13788488	13788328;13792654	+	13786021	13792654	cassetteExon	0.5	100	100	ENSMUST00000166277.5	ENSMUSG00000090336.6	Cfap97d2	chr8	protein_coding	CFAP97 domain containing 2
chr8	13756056	13756236	+	13756056	13784831	A3SS	0.5	50	50	ENSMUST00000166277.5	ENSMUSG00000090336.6	Cfap97d2	chr8	protein_coding	CFAP97 domain containing 2
chr8	13759655	13784831	+	13756056	13784831	A5SS	0.5	50	50	ENSMUST00000166277.5	ENSMUSG00000090336.6	Cfap97d2	chr8	protein_coding	CFAP97 domain containing 2
chr8	13786021	13788319	+	13786021	13788328	A3SS	0.33	50	50	ENSMUST00000214337.2	ENSMUSG00000090336.6	Cfap97d2	chr8	protein_coding	CFAP97 domain containing 2
chr8	13786021	13792654	+	13786021	13788319	3pMXE	0.33	50	50	ENSMUST00000208283.2	ENSMUSG00000090336.6	Cfap97d2	chr8	protein_coding	CFAP97 domain containing 2
chr8	13807854;13809052	13808998;13809140	+	13807854	13809140	cassetteExon	0.5	100	100	ENSMUST00000130173.9	ENSMUSG00000038416.16	Cdc16	chr8	protein_coding	CDC16 cell division cycle 16
chr8	13807854	13808048	+	13807854	13809140	A3SS	0.33	50	50	ENSMUST00000130173.9	ENSMUSG00000038416.16	Cdc16	chr8	protein_coding	CDC16 cell division cycle 16
chr8	13807854;13808305	13808048;13808998	+	13807854	13808998	cassetteExon	0.5	100	100	ENSMUST00000043962.9	ENSMUSG00000038416.16	Cdc16	chr8	protein_coding	CDC16 cell division cycle 16
chr8	13919838	13927798	+	13919811	13927798	A5SS	0.5	50	50	ENSMUST00000051870.8	ENSMUSG00000047710.9	Champ1	chr8	protein_coding	chromosome alignment maintaining phosphoprotein 1
chr8	13937826	13939853	-	13937826	13940167	A5SS	0.5	50	50	ENSMUST00000033839.9	ENSMUSG00000031458.9	Coprs	chr8	protein_coding	coordinator of PRMT5, differentiation stimulator
chr8	13985289	13989563	+	13985289;13988948	13988922;13989563	ES	0.5	50	50	ENSMUST00000209913.2	ENSMUSG00000038365.9	Fbxo25	chr8	protein_coding	F-box protein 25
chr8	13979440	13981182	+	13979440	13981185	A3SS	0.5	50	50	ENSMUST00000209913.2	ENSMUSG00000038365.9	Fbxo25	chr8	protein_coding	F-box protein 25
chr8	13985289	13989563	+	13988948	13989563	5pMXE	0.5	50	50	ENSMUST00000209310.2	ENSMUSG00000038365.9	Fbxo25	chr8	protein_coding	F-box protein 25
chr8	14004135	14024541	-	14004135;14005817	14005720;14024541	ES	0.5	50	50	ENSMUST00000062613.12	ENSMUSG00000050052.13	Tdrp	chr8	protein_coding	testis development related protein
chr8	14005817	14011729	-	14005817	14024541	A5SS	0.5	50	50	ENSMUST00000062613.12	ENSMUSG00000050052.13	Tdrp	chr8	protein_coding	testis development related protein
chr8	14049146	14052844	+	14036149	14052844	A5SS	0.5	50	50	ENSMUST00000209784.2	ENSMUSG00000110058.2	Gm5907	chr8	lncRNA	predicted gene 5907
chr8	14083764;14098731	14098699;14114205	-	14083764	14114205	cassetteExon	0.5	100	100	ENSMUST00000110813.5	ENSMUSG00000051978.10	Erich1	chr8	protein_coding	glutamate rich 1
chr8	14872695	14879869	+	14872695;14873615	14873574;14879869	ES	0.5	50	50	ENSMUST00000152652.8	ENSMUSG00000047495.16	Dlgap2	chr8	protein_coding	DLG associated protein 2
chr8	14146141;14229681	14229583;14307972	+	14146141	14307972	cassetteExon	0.5	100	100	ENSMUST00000152652.8	ENSMUSG00000047495.16	Dlgap2	chr8	protein_coding	DLG associated protein 2
chr8	14793461	14810753	+	14793461	14823234	A3SS	0.5	50	50	ENSMUST00000152652.8	ENSMUSG00000047495.16	Dlgap2	chr8	protein_coding	DLG associated protein 2
chr8	14432188	14581029	+	14308026	14581029	A5SS	0.33	50	50	ENSMUST00000152652.8	ENSMUSG00000047495.16	Dlgap2	chr8	protein_coding	DLG associated protein 2
chr8	14504526	14581029	+	14308026	14581029	A5SS	0.33	50	50	ENSMUST00000152652.8	ENSMUSG00000047495.16	Dlgap2	chr8	protein_coding	DLG associated protein 2
chr8	14792804	14793250	+	14777998	14793250	A5SS	0.5	50	50	ENSMUST00000152652.8	ENSMUSG00000047495.16	Dlgap2	chr8	protein_coding	DLG associated protein 2
chr8	14827814	14828196	+	14823381	14828196	A5SS	0.5	50	50	ENSMUST00000152652.8	ENSMUSG00000047495.16	Dlgap2	chr8	protein_coding	DLG associated protein 2
chr8	14146141	14307972	+	14229681	14307972	5pMXE	0.5	50	50	ENSMUST00000150247.8	ENSMUSG00000047495.16	Dlgap2	chr8	protein_coding	DLG associated protein 2
chr8	14432188	14581029	+	14432188	14557010	3pMXE	0.33	50	50	ENSMUST00000141155.2	ENSMUSG00000047495.16	Dlgap2	chr8	protein_coding	DLG associated protein 2
chr8	14432188	14504401	+	14432188	14557010	A3SS	0.33	50	50	ENSMUST00000141155.2	ENSMUSG00000047495.16	Dlgap2	chr8	protein_coding	DLG associated protein 2
chr8	14432188	14581029	+	14432188;14504526	14504401;14581029	ES	0.5	50	50	ENSMUST00000136000.8	ENSMUSG00000047495.16	Dlgap2	chr8	protein_coding	DLG associated protein 2
chr8	14938076	14944572	+	14931860	14944572	A5SS	0.2	50	50	ENSMUST00000132001.2	ENSMUSG00000026317.8	Cln8	chr8	protein_coding	CLN8 transmembrane ER and ERGIC protein
chr8	14939118	14944572	+	14931860	14944572	A5SS	0.2	50	50	ENSMUST00000132001.2	ENSMUSG00000026317.8	Cln8	chr8	protein_coding	CLN8 transmembrane ER and ERGIC protein
chr8	14939417	14944572	+	14931860	14944572	A5SS	0.2	50	50	ENSMUST00000132001.2	ENSMUSG00000026317.8	Cln8	chr8	protein_coding	CLN8 transmembrane ER and ERGIC protein
chr8	14940623	14944572	+	14931860	14944572	A5SS	0.2	50	50	ENSMUST00000132001.2	ENSMUSG00000026317.8	Cln8	chr8	protein_coding	CLN8 transmembrane ER and ERGIC protein
chr8	14939118	14944572	+	14938076	14944572	A5SS	0.2	50	50	ENSMUST00000123990.2	ENSMUSG00000026317.8	Cln8	chr8	protein_coding	CLN8 transmembrane ER and ERGIC protein
chr8	14939417	14944572	+	14938076	14944572	A5SS	0.2	50	50	ENSMUST00000123990.2	ENSMUSG00000026317.8	Cln8	chr8	protein_coding	CLN8 transmembrane ER and ERGIC protein
chr8	14940623	14944572	+	14938076	14944572	A5SS	0.2	50	50	ENSMUST00000123990.2	ENSMUSG00000026317.8	Cln8	chr8	protein_coding	CLN8 transmembrane ER and ERGIC protein
chr8	14939118;14940623	14940492;14944572	+	14939118	14944572	cassetteExon	0.5	100	100	ENSMUST00000027554.8	ENSMUSG00000026317.8	Cln8	chr8	protein_coding	CLN8 transmembrane ER and ERGIC protein
chr8	14939417	14944572	+	14939118	14944572	A5SS	0.2	50	50	ENSMUST00000027554.8	ENSMUSG00000026317.8	Cln8	chr8	protein_coding	CLN8 transmembrane ER and ERGIC protein
chr8	14939417	14944572	+	14940623	14944572	A5SS&ES	0.33	50	50	ENSMUST00000133578.2	ENSMUSG00000026317.8	Cln8	chr8	protein_coding	CLN8 transmembrane ER and ERGIC protein
chr8	14990372	14995280	+	14990372;14992726	14992610;14995280	ES	0.5	50	50	ENSMUST00000084207.12	ENSMUSG00000071176.11	Arhgef10	chr8	protein_coding	Rho guanine nucleotide exchange factor (GEF) 10
chr8	15027669	15029800	+	15027669;15028523	15028437;15029800	ES	0.5	50	50	ENSMUST00000084207.12	ENSMUSG00000071176.11	Arhgef10	chr8	protein_coding	Rho guanine nucleotide exchange factor (GEF) 10
chr8	14982420	14984773	+	14982420	14984770	A3SS	0.5	50	50	ENSMUST00000084207.12	ENSMUSG00000071176.11	Arhgef10	chr8	protein_coding	Rho guanine nucleotide exchange factor (GEF) 10
chr8	15040670	15041060	+	15033912	15041060	A5SS	0.5	50	50	ENSMUST00000084207.12	ENSMUSG00000071176.11	Arhgef10	chr8	protein_coding	Rho guanine nucleotide exchange factor (GEF) 10
chr8	15046434	15047542	+	15041234	15047542	A5SS	0.5	50	50	ENSMUST00000084207.12	ENSMUSG00000071176.11	Arhgef10	chr8	protein_coding	Rho guanine nucleotide exchange factor (GEF) 10
chr8	15061478	15076651	+	15061314	15076651	A5SS	0.5	50	50	ENSMUST00000069399.7	ENSMUSG00000055675.7	Kbtbd11	chr8	protein_coding	kelch repeat and BTB (POZ) domain containing 11
chr8	15082508	15082860	+	15082508	15082857	A3SS	0.5	50	50	ENSMUST00000183471.2	ENSMUSG00000055675.7	Kbtbd11	chr8	protein_coding	kelch repeat and BTB (POZ) domain containing 11
chr8	15093093	15095949	-	15093093	15095967	A5SS	0.5	50	50	ENSMUST00000050493.4	ENSMUSG00000049008.5	BB014433	chr8	protein_coding	expressed sequence BB014433
chr8	15109113	15113843	+	15107739	15113843	A5SS	0.33	50	50	ENSMUST00000033842.4	ENSMUSG00000031461.5	Myom2	chr8	protein_coding	myomesin 2
chr8	15110422	15113843	+	15107739	15113843	A5SS	0.33	50	50	ENSMUST00000033842.4	ENSMUSG00000031461.5	Myom2	chr8	protein_coding	myomesin 2
chr8	15169076	15169221	+	15167932	15169221	A5SS	0.5	50	50	ENSMUST00000033842.4	ENSMUSG00000031461.5	Myom2	chr8	protein_coding	myomesin 2
chr8	15110422	15113843	+	15109113	15113843	A5SS	0.33	50	50	ENSMUST00000135908.2	ENSMUSG00000031461.5	Myom2	chr8	protein_coding	myomesin 2
chr8	15191251	15216075	+	15191251	15417905	A3SS	0.5	50	50	ENSMUST00000211278.2	ENSMUSG00000110286.2	Gm7706	chr8	lncRNA	predicted gene 7706
chr8	15956166	15960420	-	15956166;15959174	15959130;15960420	ES	0.5	50	50	ENSMUST00000082104.7	ENSMUSG00000060924.16	Csmd1	chr8	protein_coding	CUB and Sushi multiple domains 1
chr8	16129806	16129927	-	16121501	16129927	A3SS	0.5	50	50	ENSMUST00000082104.7	ENSMUSG00000060924.16	Csmd1	chr8	protein_coding	CUB and Sushi multiple domains 1
chr8	16395831	16396585	-	16338761	16396585	A3SS	0.5	50	50	ENSMUST00000082104.7	ENSMUSG00000060924.16	Csmd1	chr8	protein_coding	CUB and Sushi multiple domains 1
chr8	17442690	17584906	-	17266839	17584906	A3SS	0.5	50	50	ENSMUST00000082104.7	ENSMUSG00000060924.16	Csmd1	chr8	protein_coding	CUB and Sushi multiple domains 1
chr8	15982636	15994994	-	15982636	15995005	A5SS	0.5	50	50	ENSMUST00000082104.7	ENSMUSG00000060924.16	Csmd1	chr8	protein_coding	CUB and Sushi multiple domains 1
chr8	16483249	16486483	+	16483249	16485207	3pMXE	0.5	50	50	ENSMUST00000149000.2	ENSMUSG00000087363.2	Gm16347	chr8	lncRNA	predicted gene 16347
chr8	18672710	18677134	+	18672710;18675690	18675576;18677134	ES	0.5	50	50	ENSMUST00000039412.15	ENSMUSG00000039842.16	Mcph1	chr8	protein_coding	microcephaly, primary autosomal recessive 1
chr8	18691681	18702479	+	18691681	18718962	A3SS	0.5	50	50	ENSMUST00000039412.15	ENSMUSG00000039842.16	Mcph1	chr8	protein_coding	microcephaly, primary autosomal recessive 1
chr8	18739075	18761570	+	18739075	18838255	A3SS	0.5	50	50	ENSMUST00000039412.15	ENSMUSG00000039842.16	Mcph1	chr8	protein_coding	microcephaly, primary autosomal recessive 1
chr8	18677334	18679562	+	18677256	18679562	A5SS	0.5	50	50	ENSMUST00000039412.15	ENSMUSG00000039842.16	Mcph1	chr8	protein_coding	microcephaly, primary autosomal recessive 1
chr8	18672710	18677134	+	18675690	18677134	5pMXE	0.5	50	50	ENSMUST00000133417.2	ENSMUSG00000039842.16	Mcph1	chr8	protein_coding	microcephaly, primary autosomal recessive 1
chr8	18749185	18749434	-	18749185	18753495	A5SS	0.5	50	50	ENSMUST00000033846.7	ENSMUSG00000031465.7	Angpt2	chr8	protein_coding	angiopoietin 2
chr8	18929748	18931754	+	18929744	18931754	A5SS	0.5	50	50	ENSMUST00000149565.8	ENSMUSG00000031467.11	Agpat5	chr8	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)
chr8	18998758	19000892	-	18998758	18999715	5pMXE	0.33	50	50	ENSMUST00000144987.8	ENSMUSG00000039814.16	Xkr5	chr8	protein_coding	X-linked Kx blood group related 5
chr8	18992145;18995795	18995670;18998575	-	18992145	18998575	cassetteExon	0.5	100	100	ENSMUST00000144987.8	ENSMUSG00000039814.16	Xkr5	chr8	protein_coding	X-linked Kx blood group related 5
chr8	18998758	19000552	-	18998758	18999715	A5SS	0.33	50	50	ENSMUST00000144987.8	ENSMUSG00000039814.16	Xkr5	chr8	protein_coding	X-linked Kx blood group related 5
chr8	18998758	19000892	-	18998758	19000552	A5SS	0.33	50	50	ENSMUST00000055503.12	ENSMUSG00000039814.16	Xkr5	chr8	protein_coding	X-linked Kx blood group related 5
chr8	19190874	19196196	+	19190874	19191387	3pMXE	0.25	50	50	ENSMUST00000110767.2	ENSMUSG00000059463.8	Spag11b	chr8	protein_coding	sperm associated antigen 11B
chr8	19190874	19209273	+	19190874	19191387	3pMXE	0.25	50	50	ENSMUST00000110767.2	ENSMUSG00000059463.8	Spag11b	chr8	protein_coding	sperm associated antigen 11B
chr8	19190874	19191390	+	19190874	19191387	A3SS	0.25	50	50	ENSMUST00000110767.2	ENSMUSG00000059463.8	Spag11b	chr8	protein_coding	sperm associated antigen 11B
chr8	19190874	19191390	+	19190874	19209273	A3SS	0.25	50	50	ENSMUST00000212226.2	ENSMUSG00000110641.2	Gm45826	chr8	protein_coding	predicted gene 45826
chr8	19190874	19196196	+	19190874	19209273	A3SS	0.25	50	50	ENSMUST00000212226.2	ENSMUSG00000110641.2	Gm45826	chr8	protein_coding	predicted gene 45826
chr8	19205719	19209273	+	19190874	19209273	A5SS	0.33	50	50	ENSMUST00000212226.2	ENSMUSG00000110641.2	Gm45826	chr8	protein_coding	predicted gene 45826
chr8	19208015	19209273	+	19190874	19209273	A5SS	0.33	50	50	ENSMUST00000212226.2	ENSMUSG00000110641.2	Gm45826	chr8	protein_coding	predicted gene 45826
chr8	19190874	19191390	+	19190874	19196196	A3SS	0.25	50	50	ENSMUST00000212965.2	ENSMUSG00000110641.2	Gm45826	chr8	protein_coding	predicted gene 45826
chr8	19208015	19209273	+	19205719	19209273	A5SS	0.33	50	50	ENSMUST00000212965.2	ENSMUSG00000110641.2	Gm45826	chr8	protein_coding	predicted gene 45826
chr8	20158178	20163110	+	20157999	20163110	A5SS	0.5	50	50	ENSMUST00000153748.2	ENSMUSG00000071796.14	6820431F20Rik	chr8	transcribed_unprocessed_pseudogene	RIKEN cDNA 6820431F20 gene
chr8	20167157	20169061	+	20167157	20169060	A3SS	0.5	50	50	ENSMUST00000150051.8	ENSMUSG00000071796.14	6820431F20Rik	chr8	transcribed_unprocessed_pseudogene	RIKEN cDNA 6820431F20 gene
chr8	21390964	21391932	-	21390973	21391932	A3SS	0.5	50	50	ENSMUST00000167686.3	ENSMUSG00000082976.11	Gm15056	chr8	protein_coding	predicted gene 15056
chr8	22460741	22463134	+	22459851	22463134	A5SS	0.5	50	50	ENSMUST00000070649.2	ENSMUSG00000017049.5	Ccdc70	chr8	protein_coding	coiled-coil domain containing 70
chr8	22550786	22555016	+	22550786;22552132	22551902;22555016	ES	0.5	50	50	ENSMUST00000072572.13	ENSMUSG00000063362.14	Alg11	chr8	protein_coding	asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase)
chr8	22552132	22555142	+	22552132	22555016	A3SS	0.5	50	50	ENSMUST00000072572.13	ENSMUSG00000063362.14	Alg11	chr8	protein_coding	asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase)
chr8	22550786	22555016	+	22550786	22551902	A3SS&ES	0.5	50	50	ENSMUST00000110737.3	ENSMUSG00000063362.14	Alg11	chr8	protein_coding	asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase)
chr8	22564110	22569103	-	22564110;22568589	22568472;22569103	ES	0.5	50	50	ENSMUST00000169834.2	ENSMUSG00000037738.12	Nek5	chr8	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 5
chr8	22580564;22584314	22584222;22585224	-	22580564	22585224	cassetteExon	0.5	100	100	ENSMUST00000169834.2	ENSMUSG00000037738.12	Nek5	chr8	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 5
chr8	22571416	22573346	-	22569211	22573346	A3SS	0.5	50	50	ENSMUST00000169834.2	ENSMUSG00000037738.12	Nek5	chr8	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 5
chr8	22575585	22578818	-	22575599	22578818	A3SS	0.5	50	50	ENSMUST00000169834.2	ENSMUSG00000037738.12	Nek5	chr8	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 5
chr8	22597765	22597856	-	22597779	22597856	A3SS	0.5	50	50	ENSMUST00000169834.2	ENSMUSG00000037738.12	Nek5	chr8	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 5
chr8	22613697	22615002	-	22608855	22615002	A3SS	0.5	50	50	ENSMUST00000210824.2	ENSMUSG00000037738.12	Nek5	chr8	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 5
chr8	22608855	22610800	-	22608855	22615002	A5SS	0.5	50	50	ENSMUST00000210824.2	ENSMUSG00000037738.12	Nek5	chr8	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 5
chr8	22622215	22623009	-	22622209	22623009	A3SS	0.5	50	50	ENSMUST00000033865.16	ENSMUSG00000031478.17	Nek3	chr8	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 3
chr8	22717445	22733013	+	22717445;22728613	22728471;22733013	ES	0.5	50	50	ENSMUST00000069828.10	ENSMUSG00000031480.16	Thsd1	chr8	protein_coding	thrombospondin, type I, domain 1
chr8	22733972	22748308	+	22733972;22742327	22742169;22748308	ES	0.5	50	50	ENSMUST00000069828.10	ENSMUSG00000031480.16	Thsd1	chr8	protein_coding	thrombospondin, type I, domain 1
chr8	22849502;22851217	22851095;22855930	+	22849502	22855930	cassetteExon	0.5	100	100	ENSMUST00000211497.2	ENSMUSG00000031481.9	Tpte	chr8	protein_coding	transmembrane phosphatase with tensin homology
chr8	22787235	22792818	+	22787321	22792818	A5SS	0.5	50	50	ENSMUST00000211497.2	ENSMUSG00000031481.9	Tpte	chr8	protein_coding	transmembrane phosphatase with tensin homology
chr8	22963596	22966522	-	22963596;22964490	22964432;22966522	ES	0.5	50	50	ENSMUST00000163774.3	ENSMUSG00000031534.16	Smim19	chr8	protein_coding	small integral membrane protein 19
chr8	22967054	23025035	+	22966941	23025035	A5SS	0.25	50	50	ENSMUST00000067786.9	ENSMUSG00000037656.10	Slc20a2	chr8	protein_coding	solute carrier family 20, member 2
chr8	22996308	23025035	+	22966941	23025035	A5SS	0.25	50	50	ENSMUST00000067786.9	ENSMUSG00000037656.10	Slc20a2	chr8	protein_coding	solute carrier family 20, member 2
chr8	22996670	23025035	+	22966941	23025035	A5SS	0.25	50	50	ENSMUST00000067786.9	ENSMUSG00000037656.10	Slc20a2	chr8	protein_coding	solute carrier family 20, member 2
chr8	22996308	23025035	+	22967054	23025035	A5SS	0.25	50	50	ENSMUST00000209305.2	ENSMUSG00000037656.10	Slc20a2	chr8	protein_coding	solute carrier family 20, member 2
chr8	22996670	23025035	+	22967054	23025035	A5SS	0.25	50	50	ENSMUST00000209305.2	ENSMUSG00000037656.10	Slc20a2	chr8	protein_coding	solute carrier family 20, member 2
chr8	22996308;22996670	22996597;23025035	+	22996308	23025035	cassetteExon	0.5	100	100	ENSMUST00000209347.2	ENSMUSG00000037656.10	Slc20a2	chr8	protein_coding	solute carrier family 20, member 2
chr8	23073752	23077569	-	23073752	23077566	A5SS	0.5	50	50	ENSMUST00000179233.2	ENSMUSG00000008892.13	Vdac3	chr8	protein_coding	voltage-dependent anion channel 3
chr8	23132372	23137429	-	23132372;23135110	23135061;23137429	ES	0.5	50	50	ENSMUST00000033938.7	ENSMUSG00000031536.7	Polb	chr8	protein_coding	polymerase (DNA directed), beta
chr8	23150678	23151418	-	23150475	23151418	A3SS	0.5	50	50	ENSMUST00000033939.13	ENSMUSG00000031537.16	Ikbkb	chr8	protein_coding	inhibitor of kappaB kinase beta
chr8	23159741	23161647	-	23159746	23161647	A3SS	0.5	50	50	ENSMUST00000033939.13	ENSMUSG00000031537.16	Ikbkb	chr8	protein_coding	inhibitor of kappaB kinase beta
chr8	23192889	23196098	-	23185273	23196098	A3SS	0.5	50	50	ENSMUST00000033939.13	ENSMUSG00000031537.16	Ikbkb	chr8	protein_coding	inhibitor of kappaB kinase beta
chr8	23183948	23184028	-	23183948	23185179	A5SS	0.5	50	50	ENSMUST00000033939.13	ENSMUSG00000031537.16	Ikbkb	chr8	protein_coding	inhibitor of kappaB kinase beta
chr8	23247844	23248943	+	23247844	23257096	A3SS	0.5	50	50	ENSMUST00000210960.2	ENSMUSG00000031538.7	Plat	chr8	protein_coding	plasminogen activator, tissue
chr8	23294118	23295592	-	23294118	23295530	A5SS	0.5	50	50	ENSMUST00000163739.3	ENSMUSG00000031539.7	Ap3m2	chr8	protein_coding	adaptor-related protein complex 3, mu 2 subunit
chr8	23404403	23409341	+	23404403;23407846	23407697;23409341	ES	0.5	50	50	ENSMUST00000238975.2	ENSMUSG00000031540.15	Kat6a	chr8	protein_coding	K(lysine) acetyltransferase 6A
chr8	23349648;23351618	23351533;23351904	+	23349648	23351904	cassetteExon	0.5	100	100	ENSMUST00000238975.2	ENSMUSG00000031540.15	Kat6a	chr8	protein_coding	K(lysine) acetyltransferase 6A
chr8	23403854	23404285	+	23401992	23404285	A5SS	0.5	50	50	ENSMUST00000238975.2	ENSMUSG00000031540.15	Kat6a	chr8	protein_coding	K(lysine) acetyltransferase 6A
chr8	23631245	23638297	+	23631245;23631736	23631612;23638297	ES	0.25	50	50	ENSMUST00000110688.9	ENSMUSG00000031543.19	Ank1	chr8	protein_coding	ankyrin 1, erythroid
chr8	23599745;23600386	23600363;23601376	+	23599745	23601376	cassetteExon	0.5	100	100	ENSMUST00000110688.9	ENSMUSG00000031543.19	Ank1	chr8	protein_coding	ankyrin 1, erythroid
chr8	23613994;23622487	23622113;23622578	+	23613994	23622578	cassetteExon	0.5	100	100	ENSMUST00000110688.9	ENSMUSG00000031543.19	Ank1	chr8	protein_coding	ankyrin 1, erythroid
chr8	23613994;23622499	23622113;23622578	+	23613994	23622578	cassetteExon	0.5	100	100	ENSMUST00000110688.9	ENSMUSG00000031543.19	Ank1	chr8	protein_coding	ankyrin 1, erythroid
chr8	23588059	23588941	+	23588059	23588937	A3SS	0.5	50	50	ENSMUST00000110688.9	ENSMUSG00000031543.19	Ank1	chr8	protein_coding	ankyrin 1, erythroid
chr8	23604951	23605470	+	23604951	23605372	A3SS	0.5	50	50	ENSMUST00000110688.9	ENSMUSG00000031543.19	Ank1	chr8	protein_coding	ankyrin 1, erythroid
chr8	23612916	23613322	+	23612916	23613848	A3SS	0.5	50	50	ENSMUST00000110688.9	ENSMUSG00000031543.19	Ank1	chr8	protein_coding	ankyrin 1, erythroid
chr8	23613994	23621454	+	23613994	23622578	A3SS	0.33	50	50	ENSMUST00000110688.9	ENSMUSG00000031543.19	Ank1	chr8	protein_coding	ankyrin 1, erythroid
chr8	23525261	23554968	+	23465277	23554968	A5SS	0.33	50	50	ENSMUST00000110688.9	ENSMUSG00000031543.19	Ank1	chr8	protein_coding	ankyrin 1, erythroid
chr8	23548686	23554968	+	23465277	23554968	A5SS	0.33	50	50	ENSMUST00000110688.9	ENSMUSG00000031543.19	Ank1	chr8	protein_coding	ankyrin 1, erythroid
chr8	23629511	23630161	+	23625850	23630161	A5SS	0.5	50	50	ENSMUST00000110688.9	ENSMUSG00000031543.19	Ank1	chr8	protein_coding	ankyrin 1, erythroid
chr8	23631320	23631612	+	23631245	23631612	A5SS	0.5	50	50	ENSMUST00000110688.9	ENSMUSG00000031543.19	Ank1	chr8	protein_coding	ankyrin 1, erythroid
chr8	23631320	23638297	+	23631736	23638297	A5SS&ES	0.25	50	50	ENSMUST00000110688.9	ENSMUSG00000031543.19	Ank1	chr8	protein_coding	ankyrin 1, erythroid
chr8	23613994;23621570	23621454;23622113	+	23613994	23622113	cassetteExon	0.5	100	100	ENSMUST00000121802.9	ENSMUSG00000031543.19	Ank1	chr8	protein_coding	ankyrin 1, erythroid
chr8	23613994	23622578	+	23613994	23622113	A3SS	0.33	50	50	ENSMUST00000121802.9	ENSMUSG00000031543.19	Ank1	chr8	protein_coding	ankyrin 1, erythroid
chr8	23630244	23638297	+	23630244;23631245	23631180;23638297	ES	0.25	50	50	ENSMUST00000117270.9	ENSMUSG00000031543.19	Ank1	chr8	protein_coding	ankyrin 1, erythroid
chr8	23631320	23638297	+	23631245	23638297	A5SS	0.25	50	50	ENSMUST00000117270.9	ENSMUSG00000031543.19	Ank1	chr8	protein_coding	ankyrin 1, erythroid
chr8	23548686	23554968	+	23525261	23554968	A5SS	0.33	50	50	ENSMUST00000117662.8	ENSMUSG00000031543.19	Ank1	chr8	protein_coding	ankyrin 1, erythroid
chr8	23631320	23638297	+	23631320;23631736	23631612;23638297	ES	0.25	50	50	ENSMUST00000117296.8	ENSMUSG00000031543.19	Ank1	chr8	protein_coding	ankyrin 1, erythroid
chr8	23631245	23638297	+	23631736	23638297	A5SS&ES	0.25	50	50	ENSMUST00000117296.8	ENSMUSG00000031543.19	Ank1	chr8	protein_coding	ankyrin 1, erythroid
chr8	23630244	23638297	+	23630244;23631320	23631180;23638297	ES	0.25	50	50	ENSMUST00000141784.9	ENSMUSG00000031543.19	Ank1	chr8	protein_coding	ankyrin 1, erythroid
chr8	23622499	23622578	+	23622487	23622578	A5SS	0.33	50	50	ENSMUST00000084038.11	ENSMUSG00000031543.19	Ank1	chr8	protein_coding	ankyrin 1, erythroid
chr8	23631736	23638297	+	23630244	23638297	A5SS	0.25	50	50	ENSMUST00000174435.2	ENSMUSG00000031543.19	Ank1	chr8	protein_coding	ankyrin 1, erythroid
chr8	23672979	23680732	-	23672979;23674614	23674545;23680732	ES	0.5	50	50	ENSMUST00000167004.3	ENSMUSG00000031545.7	Gpat4	chr8	protein_coding	glycerol-3-phosphate acyltransferase 4
chr8	24287447;24312212	24312172;24392031	+	24287447	24392031	cassetteExon	0.5	100	100	ENSMUST00000131410.8	ENSMUSG00000037492.17	Zmat4	chr8	protein_coding	zinc finger, matrin type 4
chr8	24159817	24238416	+	24126108	24238416	A5SS	0.33	50	50	ENSMUST00000131410.8	ENSMUSG00000037492.17	Zmat4	chr8	protein_coding	zinc finger, matrin type 4
chr8	24191124	24238416	+	24126108	24238416	A5SS	0.33	50	50	ENSMUST00000131410.8	ENSMUSG00000037492.17	Zmat4	chr8	protein_coding	zinc finger, matrin type 4
chr8	24505228	24622179	+	24505228	24549762	3pMXE	0.5	50	50	ENSMUST00000042352.11	ENSMUSG00000037492.17	Zmat4	chr8	protein_coding	zinc finger, matrin type 4
chr8	24191124	24238416	+	24159817	24238416	A5SS	0.33	50	50	ENSMUST00000042352.11	ENSMUSG00000037492.17	Zmat4	chr8	protein_coding	zinc finger, matrin type 4
chr8	25043856	25048164	-	25043856	25044257	5pMXE	0.5	50	50	ENSMUST00000140417.9	ENSMUSG00000031549.17	Ido2	chr8	protein_coding	indoleamine 2,3-dioxygenase 2
chr8	25040903	25043737	-	25040903	25043623	A5SS	0.5	50	50	ENSMUST00000140417.9	ENSMUSG00000031549.17	Ido2	chr8	protein_coding	indoleamine 2,3-dioxygenase 2
chr8	25083444	25086857	-	25083444	25085418	5pMXE	0.5	50	50	ENSMUST00000110667.8	ENSMUSG00000031551.13	Ido1	chr8	protein_coding	indoleamine 2,3-dioxygenase 1
chr8	25104878	25115803	-	25104922	25115803	A3SS	0.5	50	50	ENSMUST00000033957.12	ENSMUSG00000031552.14	Adam18	chr8	protein_coding	a disintegrin and metallopeptidase domain 18
chr8	25115883	25118106	-	25092401	25118106	A3SS	0.5	50	50	ENSMUST00000138232.2	ENSMUSG00000031552.14	Adam18	chr8	protein_coding	a disintegrin and metallopeptidase domain 18
chr8	25092401	25100998	-	25092401	25118106	A5SS	0.5	50	50	ENSMUST00000138232.2	ENSMUSG00000031552.14	Adam18	chr8	protein_coding	a disintegrin and metallopeptidase domain 18
chr8	25174749	25177898	-	25167407	25177898	A3SS	0.5	50	50	ENSMUST00000167431.2	ENSMUSG00000031553.17	Adam3	chr8	protein_coding	a disintegrin and metallopeptidase domain 3 (cyritestin)
chr8	25167407	25170723	-	25167407	25177898	A5SS	0.5	50	50	ENSMUST00000167431.2	ENSMUSG00000031553.17	Adam3	chr8	protein_coding	a disintegrin and metallopeptidase domain 3 (cyritestin)
chr8	25205130	25209431	-	25205130;25205618	25205542;25209431	ES	0.33	50	50	ENSMUST00000033958.15	ENSMUSG00000031553.17	Adam3	chr8	protein_coding	a disintegrin and metallopeptidase domain 3 (cyritestin)
chr8	25205130;25209149	25209100;25209431	-	25205130;25205618	25205542;25209431	MXE	0.5	100	100	ENSMUST00000033958.15	ENSMUSG00000031553.17	Adam3	chr8	protein_coding	a disintegrin and metallopeptidase domain 3 (cyritestin)
chr8	25205618;25209149	25209100;25209431	-	25205618	25209431	cassetteExon	0.5	100	100	ENSMUST00000033958.15	ENSMUSG00000031553.17	Adam3	chr8	protein_coding	a disintegrin and metallopeptidase domain 3 (cyritestin)
chr8	25205117	25205542	-	25205130	25205542	A3SS	0.5	50	50	ENSMUST00000033958.15	ENSMUSG00000031553.17	Adam3	chr8	protein_coding	a disintegrin and metallopeptidase domain 3 (cyritestin)
chr8	25205130	25205549	-	25205130	25205542	A5SS	0.25	50	50	ENSMUST00000033958.15	ENSMUSG00000031553.17	Adam3	chr8	protein_coding	a disintegrin and metallopeptidase domain 3 (cyritestin)
chr8	25213557	25215261	-	25213557	25215295	A5SS	0.5	50	50	ENSMUST00000033958.15	ENSMUSG00000031553.17	Adam3	chr8	protein_coding	a disintegrin and metallopeptidase domain 3 (cyritestin)
chr8	25205130	25209431	-	25205130;25205618	25205549;25209431	ES	0.33	50	50	ENSMUST00000170318.8	ENSMUSG00000031553.17	Adam3	chr8	protein_coding	a disintegrin and metallopeptidase domain 3 (cyritestin)
chr8	25205130;25209149	25209100;25209431	-	25205130;25205618	25205549;25209431	MXE	0.5	100	100	ENSMUST00000170318.8	ENSMUSG00000031553.17	Adam3	chr8	protein_coding	a disintegrin and metallopeptidase domain 3 (cyritestin)
chr8	25205130;25209149	25209100;25209431	-	25205130	25209431	cassetteExon	0.5	100	100	ENSMUST00000170740.8	ENSMUSG00000031553.17	Adam3	chr8	protein_coding	a disintegrin and metallopeptidase domain 3 (cyritestin)
chr8	25205130;25205618	25205542;25209100	-	25205130	25209100	cassetteExon	0.5	100	100	ENSMUST00000168662.8	ENSMUSG00000031553.17	Adam3	chr8	protein_coding	a disintegrin and metallopeptidase domain 3 (cyritestin)
chr8	25205130;25205618	25205549;25209100	-	25205130	25209100	cassetteExon	0.5	100	100	ENSMUST00000168662.8	ENSMUSG00000031553.17	Adam3	chr8	protein_coding	a disintegrin and metallopeptidase domain 3 (cyritestin)
chr8	25205130	25209431	-	25205618	25209431	A3SS&ES	0.33	50	50	ENSMUST00000166986.9	ENSMUSG00000031553.17	Adam3	chr8	protein_coding	a disintegrin and metallopeptidase domain 3 (cyritestin)
chr8	25223173	25236673	-	25217446	25236673	A3SS	0.33	50	50	ENSMUST00000132180.8	ENSMUSG00000031554.19	Adam5	chr8	protein_coding	a disintegrin and metallopeptidase domain 5
chr8	25234293	25236673	-	25217446	25236673	A3SS	0.33	50	50	ENSMUST00000132180.8	ENSMUSG00000031554.19	Adam5	chr8	protein_coding	a disintegrin and metallopeptidase domain 5
chr8	25217446	25232114	-	25217446	25236673	A5SS	0.33	50	50	ENSMUST00000132180.8	ENSMUSG00000031554.19	Adam5	chr8	protein_coding	a disintegrin and metallopeptidase domain 5
chr8	25223173	25232114	-	25217446	25232114	A3SS	0.5	50	50	ENSMUST00000050300.15	ENSMUSG00000031554.19	Adam5	chr8	protein_coding	a disintegrin and metallopeptidase domain 5
chr8	25223173	25236673	-	25234293	25236673	A3SS&ES	0.33	50	50	ENSMUST00000050300.15	ENSMUSG00000031554.19	Adam5	chr8	protein_coding	a disintegrin and metallopeptidase domain 5
chr8	25303578	25305106	-	25217446	25305106	A3SS	0.5	50	50	ENSMUST00000130939.2	ENSMUSG00000031554.19	Adam5	chr8	protein_coding	a disintegrin and metallopeptidase domain 5
chr8	25217446	25232114	-	25217446	25305106	A5SS	0.33	50	50	ENSMUST00000130939.2	ENSMUSG00000031554.19	Adam5	chr8	protein_coding	a disintegrin and metallopeptidase domain 5
chr8	25217446	25236673	-	25217446	25305106	A5SS	0.33	50	50	ENSMUST00000130939.2	ENSMUSG00000031554.19	Adam5	chr8	protein_coding	a disintegrin and metallopeptidase domain 5
chr8	25223173	25232114	-	25223173	25236673	A5SS	0.5	50	50	ENSMUST00000209935.2	ENSMUSG00000031554.19	Adam5	chr8	protein_coding	a disintegrin and metallopeptidase domain 5
chr8	25406332	25409926	-	25406372	25409926	A3SS	0.5	50	50	ENSMUST00000121438.9	ENSMUSG00000037437.19	Adam32	chr8	protein_coding	a disintegrin and metallopeptidase domain 32
chr8	25327837	25342193	-	25327837	25342256	A5SS	0.5	50	50	ENSMUST00000121438.9	ENSMUSG00000037437.19	Adam32	chr8	protein_coding	a disintegrin and metallopeptidase domain 32
chr8	25354468	25360702	-	25342294	25360702	A3SS	0.5	50	50	ENSMUST00000173069.8	ENSMUSG00000037437.19	Adam32	chr8	protein_coding	a disintegrin and metallopeptidase domain 32
chr8	25342294	25353405	-	25342294	25360702	A5SS	0.5	50	50	ENSMUST00000173069.8	ENSMUSG00000037437.19	Adam32	chr8	protein_coding	a disintegrin and metallopeptidase domain 32
chr8	25368845	25374454	-	25342294	25374454	A3SS	0.5	50	50	ENSMUST00000140573.8	ENSMUSG00000037437.19	Adam32	chr8	protein_coding	a disintegrin and metallopeptidase domain 32
chr8	25342294	25353405	-	25342294	25374454	A5SS	0.33	50	50	ENSMUST00000140573.8	ENSMUSG00000037437.19	Adam32	chr8	protein_coding	a disintegrin and metallopeptidase domain 32
chr8	25342294	25360702	-	25342294	25374454	A5SS	0.33	50	50	ENSMUST00000140573.8	ENSMUSG00000037437.19	Adam32	chr8	protein_coding	a disintegrin and metallopeptidase domain 32
chr8	25483131;25484100	25484030;25485126	-	25483131	25485126	cassetteExon	0.5	100	100	ENSMUST00000084035.12	ENSMUSG00000031555.16	Adam9	chr8	protein_coding	a disintegrin and metallopeptidase domain 9 (meltrin gamma)
chr8	25446015	25452876	-	25446015	25452930	A5SS	0.5	50	50	ENSMUST00000084035.12	ENSMUSG00000031555.16	Adam9	chr8	protein_coding	a disintegrin and metallopeptidase domain 9 (meltrin gamma)
chr8	25493352	25494795	-	25481348	25494795	A3SS	0.5	50	50	ENSMUST00000207132.2	ENSMUSG00000031555.16	Adam9	chr8	protein_coding	a disintegrin and metallopeptidase domain 9 (meltrin gamma)
chr8	25481348	25482090	-	25481348	25494795	A5SS	0.5	50	50	ENSMUST00000207132.2	ENSMUSG00000031555.16	Adam9	chr8	protein_coding	a disintegrin and metallopeptidase domain 9 (meltrin gamma)
chr8	25507608	25510455	+	25507608;25508169	25508082;25510455	ES	0.33	50	50	ENSMUST00000033961.7	ENSMUSG00000031556.7	Tm2d2	chr8	protein_coding	TM2 domain containing 2
chr8	25508690	25510455	+	25508169	25510455	A5SS	0.33	50	50	ENSMUST00000033961.7	ENSMUSG00000031556.7	Tm2d2	chr8	protein_coding	TM2 domain containing 2
chr8	25507608	25510455	+	25507608;25508690	25508082;25510455	ES	0.33	50	50	ENSMUST00000210758.2	ENSMUSG00000031556.7	Tm2d2	chr8	protein_coding	TM2 domain containing 2
chr8	25508690	25510455	+	25507608	25510455	A5SS	0.33	50	50	ENSMUST00000210536.2	ENSMUSG00000031556.7	Tm2d2	chr8	protein_coding	TM2 domain containing 2
chr8	25562071	25592050	-	25562071;25578521	25578358;25592050	ES	0.5	50	50	ENSMUST00000064883.14	ENSMUSG00000031557.17	Plekha2	chr8	protein_coding	pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2
chr8	25578521	25581299	-	25578521	25592050	A5SS	0.25	50	50	ENSMUST00000064883.14	ENSMUSG00000031557.17	Plekha2	chr8	protein_coding	pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2
chr8	25578521	25591663	-	25578521	25592050	A5SS	0.25	50	50	ENSMUST00000064883.14	ENSMUSG00000031557.17	Plekha2	chr8	protein_coding	pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2
chr8	25578521	25591676	-	25578521	25592050	A5SS	0.25	50	50	ENSMUST00000064883.14	ENSMUSG00000031557.17	Plekha2	chr8	protein_coding	pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2
chr8	25578521	25581299	-	25578521	25591676	A5SS	0.25	50	50	ENSMUST00000128715.8	ENSMUSG00000031557.17	Plekha2	chr8	protein_coding	pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2
chr8	25578521	25591663	-	25578521	25591676	A5SS	0.25	50	50	ENSMUST00000128715.8	ENSMUSG00000031557.17	Plekha2	chr8	protein_coding	pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2
chr8	25578521	25581299	-	25578521	25591663	A5SS	0.25	50	50	ENSMUST00000098866.11	ENSMUSG00000031557.17	Plekha2	chr8	protein_coding	pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2
chr8	25592227	25599270	+	25592231	25599270	A5SS	0.33	50	50	ENSMUST00000210072.2	ENSMUSG00000110148.2	5830408C22Rik	chr8	lncRNA	RIKEN cDNA 5830408C22 gene
chr8	25592715	25599270	+	25592231	25599270	A5SS	0.33	50	50	ENSMUST00000210072.2	ENSMUSG00000110148.2	5830408C22Rik	chr8	lncRNA	RIKEN cDNA 5830408C22 gene
chr8	25592715	25599270	+	25592227	25599270	A5SS	0.33	50	50	ENSMUST00000211653.2	ENSMUSG00000110148.2	5830408C22Rik	chr8	lncRNA	RIKEN cDNA 5830408C22 gene
chr8	25668010	25730810	-	25668010	25691138	5pMXE	0.16	50	50	ENSMUST00000084512.11	ENSMUSG00000065954.12	Tacc1	chr8	protein_coding	transforming, acidic coiled-coil containing protein 1
chr8	25668010	25731510	-	25668010	25691138	5pMXE	0.16	50	50	ENSMUST00000084512.11	ENSMUSG00000065954.12	Tacc1	chr8	protein_coding	transforming, acidic coiled-coil containing protein 1
chr8	25668010;25690222	25690107;25691138	-	25668010	25691138	cassetteExon	0.5	100	100	ENSMUST00000084512.11	ENSMUSG00000065954.12	Tacc1	chr8	protein_coding	transforming, acidic coiled-coil containing protein 1
chr8	25672946	25691138	-	25668010	25691138	A3SS	0.33	50	50	ENSMUST00000084512.11	ENSMUSG00000065954.12	Tacc1	chr8	protein_coding	transforming, acidic coiled-coil containing protein 1
chr8	25668010	25669287	-	25668010	25691138	A5SS	0.16	50	50	ENSMUST00000084512.11	ENSMUSG00000065954.12	Tacc1	chr8	protein_coding	transforming, acidic coiled-coil containing protein 1
chr8	25668010	25671839	-	25668010	25691138	A5SS	0.16	50	50	ENSMUST00000084512.11	ENSMUSG00000065954.12	Tacc1	chr8	protein_coding	transforming, acidic coiled-coil containing protein 1
chr8	25668010	25690107	-	25668010;25672946	25671839;25690107	ES	0.5	50	50	ENSMUST00000084030.6	ENSMUSG00000065954.12	Tacc1	chr8	protein_coding	transforming, acidic coiled-coil containing protein 1
chr8	25672946	25691138	-	25672946;25690222	25690107;25691138	ES	0.33	50	50	ENSMUST00000084030.6	ENSMUSG00000065954.12	Tacc1	chr8	protein_coding	transforming, acidic coiled-coil containing protein 1
chr8	25690222	25746378	-	25690222	25691138	5pMXE	0.5	50	50	ENSMUST00000084030.6	ENSMUSG00000065954.12	Tacc1	chr8	protein_coding	transforming, acidic coiled-coil containing protein 1
chr8	25668010	25669287	-	25668010	25671839	A5SS	0.25	50	50	ENSMUST00000084030.6	ENSMUSG00000065954.12	Tacc1	chr8	protein_coding	transforming, acidic coiled-coil containing protein 1
chr8	25668010	25669287	-	25668010	25731510	A5SS	0.16	50	50	ENSMUST00000210016.2	ENSMUSG00000065954.12	Tacc1	chr8	protein_coding	transforming, acidic coiled-coil containing protein 1
chr8	25668010	25671839	-	25668010	25731510	A5SS	0.16	50	50	ENSMUST00000210016.2	ENSMUSG00000065954.12	Tacc1	chr8	protein_coding	transforming, acidic coiled-coil containing protein 1
chr8	25668010	25690107	-	25668010	25731510	A5SS	0.16	50	50	ENSMUST00000210016.2	ENSMUSG00000065954.12	Tacc1	chr8	protein_coding	transforming, acidic coiled-coil containing protein 1
chr8	25668010	25730810	-	25668010	25731510	A5SS	0.16	50	50	ENSMUST00000210016.2	ENSMUSG00000065954.12	Tacc1	chr8	protein_coding	transforming, acidic coiled-coil containing protein 1
chr8	25672946	25730810	-	25668010	25730810	A3SS	0.5	50	50	ENSMUST00000210933.2	ENSMUSG00000065954.12	Tacc1	chr8	protein_coding	transforming, acidic coiled-coil containing protein 1
chr8	25668010	25669287	-	25668010	25730810	A5SS	0.16	50	50	ENSMUST00000210933.2	ENSMUSG00000065954.12	Tacc1	chr8	protein_coding	transforming, acidic coiled-coil containing protein 1
chr8	25668010	25671839	-	25668010	25730810	A5SS	0.16	50	50	ENSMUST00000210933.2	ENSMUSG00000065954.12	Tacc1	chr8	protein_coding	transforming, acidic coiled-coil containing protein 1
chr8	25668010	25690107	-	25668010	25730810	A5SS	0.16	50	50	ENSMUST00000210933.2	ENSMUSG00000065954.12	Tacc1	chr8	protein_coding	transforming, acidic coiled-coil containing protein 1
chr8	25672946	25690107	-	25668010	25690107	A3SS	0.5	50	50	ENSMUST00000210767.2	ENSMUSG00000065954.12	Tacc1	chr8	protein_coding	transforming, acidic coiled-coil containing protein 1
chr8	25668010	25669287	-	25668010	25690107	A5SS	0.16	50	50	ENSMUST00000210767.2	ENSMUSG00000065954.12	Tacc1	chr8	protein_coding	transforming, acidic coiled-coil containing protein 1
chr8	25668010	25671839	-	25668010	25690107	A5SS	0.16	50	50	ENSMUST00000210767.2	ENSMUSG00000065954.12	Tacc1	chr8	protein_coding	transforming, acidic coiled-coil containing protein 1
chr8	25668010	25691138	-	25668010	25690107	A5SS&ES	0.16	50	50	ENSMUST00000210767.2	ENSMUSG00000065954.12	Tacc1	chr8	protein_coding	transforming, acidic coiled-coil containing protein 1
chr8	25672946	25690107	-	25672946	25730810	A5SS	0.33	50	50	ENSMUST00000210488.2	ENSMUSG00000065954.12	Tacc1	chr8	protein_coding	transforming, acidic coiled-coil containing protein 1
chr8	25672946	25691138	-	25672946	25730810	A5SS	0.33	50	50	ENSMUST00000210488.2	ENSMUSG00000065954.12	Tacc1	chr8	protein_coding	transforming, acidic coiled-coil containing protein 1
chr8	25672946	25691138	-	25672946	25690107	A5SS&ES	0.33	50	50	ENSMUST00000209827.2	ENSMUSG00000065954.12	Tacc1	chr8	protein_coding	transforming, acidic coiled-coil containing protein 1
chr8	25931036	25931222	+	25930693	25931222	A5SS	0.5	50	50	ENSMUST00000211673.2	ENSMUSG00000110017.2	Gm45237	chr8	lncRNA	predicted gene 45237
chr8	26022444	26047747	+	26022444	26045524	3pMXE	0.33	50	50	ENSMUST00000155564.8	ENSMUSG00000031565.19	Fgfr1	chr8	protein_coding	fibroblast growth factor receptor 1
chr8	26022444	26045485	+	26022444	26045524	A3SS	0.33	50	50	ENSMUST00000155564.8	ENSMUSG00000031565.19	Fgfr1	chr8	protein_coding	fibroblast growth factor receptor 1
chr8	26009445	26022266	+	26004267	26022266	A5SS	0.25	50	50	ENSMUST00000155564.8	ENSMUSG00000031565.19	Fgfr1	chr8	protein_coding	fibroblast growth factor receptor 1
chr8	26009939	26022266	+	26004267	26022266	A5SS	0.25	50	50	ENSMUST00000155564.8	ENSMUSG00000031565.19	Fgfr1	chr8	protein_coding	fibroblast growth factor receptor 1
chr8	26022177	26022266	+	26004267	26022266	A5SS	0.25	50	50	ENSMUST00000155564.8	ENSMUSG00000031565.19	Fgfr1	chr8	protein_coding	fibroblast growth factor receptor 1
chr8	26022313	26045524	+	26022444	26045524	A5SS	0.5	50	50	ENSMUST00000155564.8	ENSMUSG00000031565.19	Fgfr1	chr8	protein_coding	fibroblast growth factor receptor 1
chr8	26022444	26047747	+	26022444;26045790	26045524;26047747	ES	0.33	50	50	ENSMUST00000084027.13	ENSMUSG00000031565.19	Fgfr1	chr8	protein_coding	fibroblast growth factor receptor 1
chr8	26052344;26053540	26053390;26054356	+	26052344	26054356	cassetteExon	0.5	100	100	ENSMUST00000084027.13	ENSMUSG00000031565.19	Fgfr1	chr8	protein_coding	fibroblast growth factor receptor 1
chr8	26052344;26053540	26053390;26056727	+	26052344;26054500	26054356;26056727	MXE	0.5	100	100	ENSMUST00000084027.13	ENSMUSG00000031565.19	Fgfr1	chr8	protein_coding	fibroblast growth factor receptor 1
chr8	26009939	26022266	+	26009445	26022266	A5SS	0.25	50	50	ENSMUST00000084027.13	ENSMUSG00000031565.19	Fgfr1	chr8	protein_coding	fibroblast growth factor receptor 1
chr8	26022177	26022266	+	26009445	26022266	A5SS	0.25	50	50	ENSMUST00000084027.13	ENSMUSG00000031565.19	Fgfr1	chr8	protein_coding	fibroblast growth factor receptor 1
chr8	26022313	26047747	+	26045790	26047747	A5SS&ES	0.33	50	50	ENSMUST00000084027.13	ENSMUSG00000031565.19	Fgfr1	chr8	protein_coding	fibroblast growth factor receptor 1
chr8	26047830	26048087	+	26047836	26048087	A5SS	0.5	50	50	ENSMUST00000084027.13	ENSMUSG00000031565.19	Fgfr1	chr8	protein_coding	fibroblast growth factor receptor 1
chr8	26056923	26058204	+	26056929	26058204	A5SS	0.33	50	50	ENSMUST00000084027.13	ENSMUSG00000031565.19	Fgfr1	chr8	protein_coding	fibroblast growth factor receptor 1
chr8	26057370	26058204	+	26056929	26058204	A5SS	0.33	50	50	ENSMUST00000084027.13	ENSMUSG00000031565.19	Fgfr1	chr8	protein_coding	fibroblast growth factor receptor 1
chr8	26022444;26045790	26045485;26047747	+	26022444	26047747	cassetteExon	0.5	100	100	ENSMUST00000178276.8	ENSMUSG00000031565.19	Fgfr1	chr8	protein_coding	fibroblast growth factor receptor 1
chr8	26053540;26054500	26054356;26056727	+	26053540	26056727	cassetteExon	0.5	100	100	ENSMUST00000178276.8	ENSMUSG00000031565.19	Fgfr1	chr8	protein_coding	fibroblast growth factor receptor 1
chr8	26022313	26047747	+	26022444	26047747	A5SS	0.33	50	50	ENSMUST00000178276.8	ENSMUSG00000031565.19	Fgfr1	chr8	protein_coding	fibroblast growth factor receptor 1
chr8	26022313	26047747	+	26022313	26045524	3pMXE	0.5	50	50	ENSMUST00000148322.2	ENSMUSG00000031565.19	Fgfr1	chr8	protein_coding	fibroblast growth factor receptor 1
chr8	26022313;26045790	26045524;26047747	+	26022313	26047747	cassetteExon	0.5	100	100	ENSMUST00000210778.2	ENSMUSG00000031565.19	Fgfr1	chr8	protein_coding	fibroblast growth factor receptor 1
chr8	26022177	26022266	+	26009939	26022266	A5SS	0.25	50	50	ENSMUST00000124228.2	ENSMUSG00000031565.19	Fgfr1	chr8	protein_coding	fibroblast growth factor receptor 1
chr8	26022444	26047747	+	26045790	26047747	5pMXE	0.33	50	50	ENSMUST00000138104.9	ENSMUSG00000031565.19	Fgfr1	chr8	protein_coding	fibroblast growth factor receptor 1
chr8	26057370	26058204	+	26056923	26058204	A5SS	0.33	50	50	ENSMUST00000138104.9	ENSMUSG00000031565.19	Fgfr1	chr8	protein_coding	fibroblast growth factor receptor 1
chr8	26052344	26054356	+	26052344	26053390	3pMXE	0.5	50	50	ENSMUST00000138455.2	ENSMUSG00000031565.19	Fgfr1	chr8	protein_coding	fibroblast growth factor receptor 1
chr8	26053540	26056727	+	26054500	26056727	A5SS	0.5	50	50	ENSMUST00000126118.9	ENSMUSG00000031565.19	Fgfr1	chr8	protein_coding	fibroblast growth factor receptor 1
chr8	26042903	26043535	-	26039061	26043535	A3SS	0.5	50	50	ENSMUST00000126122.2	ENSMUSG00000086134.2	Gm16159	chr8	lncRNA	predicted gene 16159
chr8	26077449	26079286	-	26077449	26082468	A5SS	0.33	50	50	ENSMUST00000079160.8	ENSMUSG00000037363.10	Letm2	chr8	protein_coding	leucine zipper-EF-hand containing transmembrane protein 2
chr8	26077449	26079471	-	26077449	26082468	A5SS	0.33	50	50	ENSMUST00000079160.8	ENSMUSG00000037363.10	Letm2	chr8	protein_coding	leucine zipper-EF-hand containing transmembrane protein 2
chr8	26082611	26083767	-	26082611	26083735	A5SS	0.5	50	50	ENSMUST00000079160.8	ENSMUSG00000037363.10	Letm2	chr8	protein_coding	leucine zipper-EF-hand containing transmembrane protein 2
chr8	26084182	26086980	-	26084182	26086378	A5SS&ES	0.5	50	50	ENSMUST00000079160.8	ENSMUSG00000037363.10	Letm2	chr8	protein_coding	leucine zipper-EF-hand containing transmembrane protein 2
chr8	26086461	26086980	-	26086461	26087136	A5SS	0.25	50	50	ENSMUST00000079160.8	ENSMUSG00000037363.10	Letm2	chr8	protein_coding	leucine zipper-EF-hand containing transmembrane protein 2
chr8	26086461	26087291	-	26086461	26087136	A5SS	0.25	50	50	ENSMUST00000079160.8	ENSMUSG00000037363.10	Letm2	chr8	protein_coding	leucine zipper-EF-hand containing transmembrane protein 2
chr8	26086461	26087515	-	26086461	26087136	A5SS	0.25	50	50	ENSMUST00000079160.8	ENSMUSG00000037363.10	Letm2	chr8	protein_coding	leucine zipper-EF-hand containing transmembrane protein 2
chr8	26086461	26086980	-	26086461	26087291	A5SS	0.25	50	50	ENSMUST00000210321.2	ENSMUSG00000037363.10	Letm2	chr8	protein_coding	leucine zipper-EF-hand containing transmembrane protein 2
chr8	26086461	26087515	-	26086461	26087291	A5SS	0.25	50	50	ENSMUST00000210321.2	ENSMUSG00000037363.10	Letm2	chr8	protein_coding	leucine zipper-EF-hand containing transmembrane protein 2
chr8	26077449	26079286	-	26077449	26079471	A5SS	0.33	50	50	ENSMUST00000209539.2	ENSMUSG00000037363.10	Letm2	chr8	protein_coding	leucine zipper-EF-hand containing transmembrane protein 2
chr8	26084182	26086980	-	26084182;26086461	26086378;26086980	ES	0.5	50	50	ENSMUST00000210810.2	ENSMUSG00000037363.10	Letm2	chr8	protein_coding	leucine zipper-EF-hand containing transmembrane protein 2
chr8	26086461	26087515	-	26086461	26086980	5pMXE	0.25	50	50	ENSMUST00000210810.2	ENSMUSG00000037363.10	Letm2	chr8	protein_coding	leucine zipper-EF-hand containing transmembrane protein 2
chr8	26165758	26168732	+	26165758	26166719	3pMXE	0.5	50	50	ENSMUST00000155861.8	ENSMUSG00000054823.18	Nsd3	chr8	protein_coding	nuclear receptor binding SET domain protein 3
chr8	26092752	26130593	+	26092009	26130593	A5SS	0.5	50	50	ENSMUST00000155861.8	ENSMUSG00000054823.18	Nsd3	chr8	protein_coding	nuclear receptor binding SET domain protein 3
chr8	26173338;26181188	26181042;26184716	+	26173338	26184716	cassetteExon	0.5	100	100	ENSMUST00000139966.8	ENSMUSG00000054823.18	Nsd3	chr8	protein_coding	nuclear receptor binding SET domain protein 3
chr8	26184212	26184716	+	26173338	26184716	A5SS	0.33	50	50	ENSMUST00000139966.8	ENSMUSG00000054823.18	Nsd3	chr8	protein_coding	nuclear receptor binding SET domain protein 3
chr8	26188645	26188761	+	26184872	26188761	A5SS	0.5	50	50	ENSMUST00000139966.8	ENSMUSG00000054823.18	Nsd3	chr8	protein_coding	nuclear receptor binding SET domain protein 3
chr8	26196635	26199090	+	26196668	26199090	A5SS	0.5	50	50	ENSMUST00000139966.8	ENSMUSG00000054823.18	Nsd3	chr8	protein_coding	nuclear receptor binding SET domain protein 3
chr8	26184212	26184716	+	26181188	26184716	A5SS	0.33	50	50	ENSMUST00000142395.8	ENSMUSG00000054823.18	Nsd3	chr8	protein_coding	nuclear receptor binding SET domain protein 3
chr8	26210672	26211689	+	26210672;26211264	26211201;26211689	ES	0.5	50	50	ENSMUST00000068916.16	ENSMUSG00000031570.18	Plpp5	chr8	protein_coding	phospholipid phosphatase 5
chr8	26212627;26213140	26213058;26214107	+	26212627	26214107	cassetteExon	0.5	100	100	ENSMUST00000068916.16	ENSMUSG00000031570.18	Plpp5	chr8	protein_coding	phospholipid phosphatase 5
chr8	26211813	26212499	+	26211813	26212457	A3SS	0.5	50	50	ENSMUST00000068916.16	ENSMUSG00000031570.18	Plpp5	chr8	protein_coding	phospholipid phosphatase 5
chr8	26212627	26214208	+	26212627	26214107	A3SS	0.33	50	50	ENSMUST00000068916.16	ENSMUSG00000031570.18	Plpp5	chr8	protein_coding	phospholipid phosphatase 5
chr8	26210362	26210582	+	26210402	26210582	A5SS	0.33	50	50	ENSMUST00000068916.16	ENSMUSG00000031570.18	Plpp5	chr8	protein_coding	phospholipid phosphatase 5
chr8	26210510	26210582	+	26210402	26210582	A5SS	0.33	50	50	ENSMUST00000068916.16	ENSMUSG00000031570.18	Plpp5	chr8	protein_coding	phospholipid phosphatase 5
chr8	26210510	26210582	+	26210362	26210582	A5SS	0.33	50	50	ENSMUST00000124764.8	ENSMUSG00000031570.18	Plpp5	chr8	protein_coding	phospholipid phosphatase 5
chr8	26212627	26214208	+	26212627	26213058	A3SS&ES	0.33	50	50	ENSMUST00000139836.8	ENSMUSG00000031570.18	Plpp5	chr8	protein_coding	phospholipid phosphatase 5
chr8	26212627	26214107	+	26213140	26214107	5pMXE	0.5	50	50	ENSMUST00000146762.2	ENSMUSG00000031570.18	Plpp5	chr8	protein_coding	phospholipid phosphatase 5
chr8	26229612	26231628	-	26229612;26231381	26231314;26231628	ES	0.5	50	50	ENSMUST00000033975.9	ENSMUSG00000061313.11	Ddhd2	chr8	protein_coding	DDHD domain containing 2
chr8	26237662	26238565	-	26236980	26238565	A3SS	0.5	50	50	ENSMUST00000033975.9	ENSMUSG00000061313.11	Ddhd2	chr8	protein_coding	DDHD domain containing 2
chr8	26242257	26242975	-	26242317	26242975	A3SS	0.5	50	50	ENSMUST00000033975.9	ENSMUSG00000061313.11	Ddhd2	chr8	protein_coding	DDHD domain containing 2
chr8	26225138	26228242	-	26225138	26225772	A5SS&ES	0.5	50	50	ENSMUST00000033975.9	ENSMUSG00000061313.11	Ddhd2	chr8	protein_coding	DDHD domain containing 2
chr8	26243200	26244294	-	26243200	26244213	A5SS	0.5	50	50	ENSMUST00000033975.9	ENSMUSG00000061313.11	Ddhd2	chr8	protein_coding	DDHD domain containing 2
chr8	26282355	26283705	+	26282253	26283705	A5SS	0.5	50	50	ENSMUST00000038421.8	ENSMUSG00000037296.8	Lsm1	chr8	protein_coding	LSM1 homolog, mRNA degradation associated
chr8	26275745	26282185	+	26275745	26291956	A3SS	0.5	50	50	ENSMUST00000211168.2	ENSMUSG00000037296.8	Lsm1	chr8	protein_coding	LSM1 homolog, mRNA degradation associated
chr8	26283820	26291956	+	26275745	26291956	A5SS	0.5	50	50	ENSMUST00000211168.2	ENSMUSG00000037296.8	Lsm1	chr8	protein_coding	LSM1 homolog, mRNA degradation associated
chr8	26307691	26309654	-	26307691;26308672	26308574;26309654	ES	0.5	50	50	ENSMUST00000068892.15	ENSMUSG00000031575.19	Ash2l	chr8	protein_coding	ASH2 like histone lysine methyltransferase complex subunit
chr8	26317419	26321301	-	26317419;26318887	26318794;26321301	ES	0.5	50	50	ENSMUST00000068892.15	ENSMUSG00000031575.19	Ash2l	chr8	protein_coding	ASH2 like histone lysine methyltransferase complex subunit
chr8	26318887	26322668	-	26318887;26321376	26321301;26322668	ES	0.5	50	50	ENSMUST00000068892.15	ENSMUSG00000031575.19	Ash2l	chr8	protein_coding	ASH2 like histone lysine methyltransferase complex subunit
chr8	26330103	26337607	-	26330103	26330610	5pMXE	0.33	50	50	ENSMUST00000068892.15	ENSMUSG00000031575.19	Ash2l	chr8	protein_coding	ASH2 like histone lysine methyltransferase complex subunit
chr8	26330103	26330397	-	26330103	26330610	A5SS	0.33	50	50	ENSMUST00000068892.15	ENSMUSG00000031575.19	Ash2l	chr8	protein_coding	ASH2 like histone lysine methyltransferase complex subunit
chr8	26317419;26318887	26318794;26322668	-	26317419;26321376	26321301;26322668	MXE	0.5	100	100	ENSMUST00000139946.8	ENSMUSG00000031575.19	Ash2l	chr8	protein_coding	ASH2 like histone lysine methyltransferase complex subunit
chr8	26307691	26309654	-	26308672	26309654	A3SS	0.5	50	50	ENSMUST00000151856.8	ENSMUSG00000031575.19	Ash2l	chr8	protein_coding	ASH2 like histone lysine methyltransferase complex subunit
chr8	26330103	26330397	-	26330103	26337607	A5SS	0.33	50	50	ENSMUST00000110610.8	ENSMUSG00000031575.19	Ash2l	chr8	protein_coding	ASH2 like histone lysine methyltransferase complex subunit
chr8	26317419	26321301	-	26317419	26318794	5pMXE	0.5	50	50	ENSMUST00000142358.2	ENSMUSG00000031575.19	Ash2l	chr8	protein_coding	ASH2 like histone lysine methyltransferase complex subunit
chr8	26401777	26403612	+	26400974	26403612	A5SS	0.33	50	50	ENSMUST00000098858.11	ENSMUSG00000031576.17	Kcnu1	chr8	protein_coding	potassium channel, subfamily U, member 1
chr8	26402046	26403612	+	26400974	26403612	A5SS	0.33	50	50	ENSMUST00000098858.11	ENSMUSG00000031576.17	Kcnu1	chr8	protein_coding	potassium channel, subfamily U, member 1
chr8	26401777;26402046	26401988;26403612	+	26401777	26403612	cassetteExon	0.5	100	100	ENSMUST00000120653.8	ENSMUSG00000031576.17	Kcnu1	chr8	protein_coding	potassium channel, subfamily U, member 1
chr8	26461730	26461828	-	26461730	26462870	A5SS	0.5	50	50	ENSMUST00000037609.8	ENSMUSG00000037260.9	Hgsnat	chr8	protein_coding	heparan-alpha-glucosaminide N-acetyltransferase
chr8	26462985	26463988	-	26462985	26466553	A5SS	0.5	50	50	ENSMUST00000037609.8	ENSMUSG00000037260.9	Hgsnat	chr8	protein_coding	heparan-alpha-glucosaminide N-acetyltransferase
chr8	26522058;26522559	26522456;26524959	-	26522058	26524959	cassetteExon	0.5	100	100	ENSMUST00000037182.14	ENSMUSG00000037234.18	Hook3	chr8	protein_coding	hook microtubule tethering protein 3
chr8	26556896	26557878	-	26551474	26557878	A3SS	0.5	50	50	ENSMUST00000037182.14	ENSMUSG00000037234.18	Hook3	chr8	protein_coding	hook microtubule tethering protein 3
chr8	26538367	26549268	-	26529779	26549268	A3SS	0.5	50	50	ENSMUST00000147613.3	ENSMUSG00000037234.18	Hook3	chr8	protein_coding	hook microtubule tethering protein 3
chr8	26529779	26534268	-	26529779	26549268	A5SS	0.5	50	50	ENSMUST00000147613.3	ENSMUSG00000037234.18	Hook3	chr8	protein_coding	hook microtubule tethering protein 3
chr8	26579026	26579122	+	26579026	26585815	A3SS	0.5	50	50	ENSMUST00000153552.9	ENSMUSG00000085437.9	1700047A11Rik	chr8	lncRNA	RIKEN cDNA 1700047A11 gene
chr8	26610591	26615932	+	26610591;26614015	26613875;26615932	ES	0.5	50	50	ENSMUST00000014022.15	ENSMUSG00000013878.19	Rnf170	chr8	protein_coding	ring finger protein 170
chr8	26619183	26629008	+	26619183;26625730	26625657;26629008	ES	0.5	50	50	ENSMUST00000014022.15	ENSMUSG00000013878.19	Rnf170	chr8	protein_coding	ring finger protein 170
chr8	26609628	26610473	+	26609628	26610468	A3SS	0.5	50	50	ENSMUST00000014022.15	ENSMUSG00000013878.19	Rnf170	chr8	protein_coding	ring finger protein 170
chr8	26619183	26628733	+	26619183	26625657	A3SS&ES	0.25	50	50	ENSMUST00000014022.15	ENSMUSG00000013878.19	Rnf170	chr8	protein_coding	ring finger protein 170
chr8	26619183	26628897	+	26619183	26625657	A3SS&ES	0.25	50	50	ENSMUST00000014022.15	ENSMUSG00000013878.19	Rnf170	chr8	protein_coding	ring finger protein 170
chr8	26619183	26650803	+	26619183	26640614	3pMXE	0.16	50	50	ENSMUST00000209300.2	ENSMUSG00000013878.19	Rnf170	chr8	protein_coding	ring finger protein 170
chr8	26619183	26625657	+	26619183	26640614	A3SS	0.16	50	50	ENSMUST00000209300.2	ENSMUSG00000013878.19	Rnf170	chr8	protein_coding	ring finger protein 170
chr8	26619183	26628733	+	26619183	26640614	A3SS	0.16	50	50	ENSMUST00000209300.2	ENSMUSG00000013878.19	Rnf170	chr8	protein_coding	ring finger protein 170
chr8	26619183	26628897	+	26619183	26640614	A3SS	0.16	50	50	ENSMUST00000209300.2	ENSMUSG00000013878.19	Rnf170	chr8	protein_coding	ring finger protein 170
chr8	26619183	26629008	+	26619183	26640614	A3SS	0.16	50	50	ENSMUST00000209300.2	ENSMUSG00000013878.19	Rnf170	chr8	protein_coding	ring finger protein 170
chr8	26619183	26628733	+	26619183	26629008	A3SS	0.25	50	50	ENSMUST00000124757.8	ENSMUSG00000013878.19	Rnf170	chr8	protein_coding	ring finger protein 170
chr8	26619183	26628897	+	26619183	26629008	A3SS	0.25	50	50	ENSMUST00000124757.8	ENSMUSG00000013878.19	Rnf170	chr8	protein_coding	ring finger protein 170
chr8	26609987	26610473	+	26609628	26610473	A5SS	0.5	50	50	ENSMUST00000209707.2	ENSMUSG00000013878.19	Rnf170	chr8	protein_coding	ring finger protein 170
chr8	26619183	26628897	+	26619183;26628777	26628733;26628897	ES	0.5	50	50	ENSMUST00000110579.10	ENSMUSG00000013878.19	Rnf170	chr8	protein_coding	ring finger protein 170
chr8	26629118	26630839	+	26629007	26630839	A5SS	0.5	50	50	ENSMUST00000110579.10	ENSMUSG00000013878.19	Rnf170	chr8	protein_coding	ring finger protein 170
chr8	26610591	26615932	+	26614015	26615932	5pMXE	0.5	50	50	ENSMUST00000124867.3	ENSMUSG00000013878.19	Rnf170	chr8	protein_coding	ring finger protein 170
chr8	26619183	26625657	+	26619183	26650803	A3SS	0.16	50	50	ENSMUST00000131138.9	ENSMUSG00000109850.2	Gm45692	chr8	protein_coding	predicted gene 45692
chr8	26619183	26628733	+	26619183	26650803	A3SS	0.16	50	50	ENSMUST00000131138.9	ENSMUSG00000109850.2	Gm45692	chr8	protein_coding	predicted gene 45692
chr8	26619183	26628897	+	26619183	26650803	A3SS	0.16	50	50	ENSMUST00000131138.9	ENSMUSG00000109850.2	Gm45692	chr8	protein_coding	predicted gene 45692
chr8	26619183	26629008	+	26619183	26650803	A3SS	0.16	50	50	ENSMUST00000131138.9	ENSMUSG00000109850.2	Gm45692	chr8	protein_coding	predicted gene 45692
chr8	26648549	26650803	+	26619183	26650803	A5SS	0.33	50	50	ENSMUST00000131138.9	ENSMUSG00000109850.2	Gm45692	chr8	protein_coding	predicted gene 45692
chr8	26649178	26650803	+	26619183	26650803	A5SS	0.33	50	50	ENSMUST00000131138.9	ENSMUSG00000109850.2	Gm45692	chr8	protein_coding	predicted gene 45692
chr8	26648549;26649178	26649126;26650803	+	26648549	26650803	cassetteExon	0.5	100	100	ENSMUST00000036807.13	ENSMUSG00000037214.13	Thap1	chr8	protein_coding	THAP domain containing, apoptosis associated protein 1
chr8	26648549	26650803	+	26648549	26649126	3pMXE	0.5	50	50	ENSMUST00000127536.2	ENSMUSG00000037214.13	Thap1	chr8	protein_coding	THAP domain containing, apoptosis associated protein 1
chr8	26648549	26650803	+	26649178	26650803	5pMXE	0.33	50	50	ENSMUST00000209926.2	ENSMUSG00000037214.13	Thap1	chr8	protein_coding	THAP domain containing, apoptosis associated protein 1
chr8	26947621	26963349	-	26947621	26958531	5pMXE	0.5	50	50	ENSMUST00000210553.2	ENSMUSG00000109961.2	Gm31983	chr8	lncRNA	predicted gene, 31983
chr8	27305333	27370368	-	27305333	27314242	5pMXE	0.5	50	50	ENSMUST00000189978.2	ENSMUSG00000100335.3	2310008N11Rik	chr8	lncRNA	RIKEN cDNA 2310008N11 gene
chr8	27331564	27370368	-	27305333	27370368	A3SS	0.5	50	50	ENSMUST00000210732.2	ENSMUSG00000100335.3	2310008N11Rik	chr8	lncRNA	RIKEN cDNA 2310008N11 gene
chr8	27331564	27370368	-	27331564	27331939	5pMXE	0.5	50	50	ENSMUST00000210955.2	ENSMUSG00000100335.3	2310008N11Rik	chr8	lncRNA	RIKEN cDNA 2310008N11 gene
chr8	27370610	27374079	-	27370610	27372517	5pMXE	0.5	50	50	ENSMUST00000211079.2	ENSMUSG00000100335.3	2310008N11Rik	chr8	lncRNA	RIKEN cDNA 2310008N11 gene
chr8	27467639	27468596	+	27467639;27468423	27468263;27468596	ES	0.5	50	50	ENSMUST00000209610.2	ENSMUSG00000085795.9	Zfp703	chr8	protein_coding	zinc finger protein 703
chr8	27467639	27468290	+	27467639	27468263	A3SS	0.33	50	50	ENSMUST00000209610.2	ENSMUSG00000085795.9	Zfp703	chr8	protein_coding	zinc finger protein 703
chr8	27467639	27468596	+	27467639;27468423	27468290;27468596	ES	0.5	50	50	ENSMUST00000127097.9	ENSMUSG00000085795.9	Zfp703	chr8	protein_coding	zinc finger protein 703
chr8	27467639	27468596	+	27468423	27468596	5pMXE	0.5	50	50	ENSMUST00000209411.2	ENSMUSG00000085795.9	Zfp703	chr8	protein_coding	zinc finger protein 703
chr8	27513654;27514955	27514862;27515085	+	27513654	27515085	cassetteExon	0.5	100	100	ENSMUST00000209795.2	ENSMUSG00000031483.9	Erlin2	chr8	protein_coding	ER lipid raft associated 2
chr8	27518973	27519203	+	27518973	27519367	A3SS	0.5	50	50	ENSMUST00000209795.2	ENSMUSG00000031483.9	Erlin2	chr8	protein_coding	ER lipid raft associated 2
chr8	27513934	27515085	+	27513654	27515085	A5SS	0.25	50	50	ENSMUST00000209795.2	ENSMUSG00000031483.9	Erlin2	chr8	protein_coding	ER lipid raft associated 2
chr8	27514193	27515085	+	27513654	27515085	A5SS	0.25	50	50	ENSMUST00000209795.2	ENSMUSG00000031483.9	Erlin2	chr8	protein_coding	ER lipid raft associated 2
chr8	27521415	27521726	+	27519697	27521726	A5SS	0.5	50	50	ENSMUST00000209795.2	ENSMUSG00000031483.9	Erlin2	chr8	protein_coding	ER lipid raft associated 2
chr8	27513934	27514862	+	27513654	27514862	A5SS	0.33	50	50	ENSMUST00000209976.2	ENSMUSG00000031483.9	Erlin2	chr8	protein_coding	ER lipid raft associated 2
chr8	27513934	27515085	+	27514955	27515085	A5SS&ES	0.25	50	50	ENSMUST00000209976.2	ENSMUSG00000031483.9	Erlin2	chr8	protein_coding	ER lipid raft associated 2
chr8	27514193	27514862	+	27513654	27514862	A5SS	0.33	50	50	ENSMUST00000209976.2	ENSMUSG00000031483.9	Erlin2	chr8	protein_coding	ER lipid raft associated 2
chr8	27514193	27515085	+	27514955	27515085	A5SS&ES	0.25	50	50	ENSMUST00000209976.2	ENSMUSG00000031483.9	Erlin2	chr8	protein_coding	ER lipid raft associated 2
chr8	27513934;27514955	27514862;27515085	+	27513934	27515085	cassetteExon	0.5	100	100	ENSMUST00000033873.9	ENSMUSG00000031483.9	Erlin2	chr8	protein_coding	ER lipid raft associated 2
chr8	27523503	27526018	+	27523503	27526042	A3SS	0.5	50	50	ENSMUST00000033873.9	ENSMUSG00000031483.9	Erlin2	chr8	protein_coding	ER lipid raft associated 2
chr8	27514193	27515085	+	27513934	27515085	A5SS	0.25	50	50	ENSMUST00000033873.9	ENSMUSG00000031483.9	Erlin2	chr8	protein_coding	ER lipid raft associated 2
chr8	27514193	27514862	+	27513934	27514862	A5SS	0.33	50	50	ENSMUST00000211043.2	ENSMUSG00000031483.9	Erlin2	chr8	protein_coding	ER lipid raft associated 2
chr8	27514193	27515085	+	27514193;27514955	27514862;27515085	ES	0.33	50	50	ENSMUST00000209563.2	ENSMUSG00000031483.9	Erlin2	chr8	protein_coding	ER lipid raft associated 2
chr8	27535163	27535952	+	27535163;27535461	27535426;27535952	ES	0.5	50	50	ENSMUST00000033875.10	ENSMUSG00000031485.16	Plpbp	chr8	protein_coding	pyridoxal phosphate binding protein
chr8	27535461	27535828	+	27535461	27535952	A3SS	0.5	50	50	ENSMUST00000033875.10	ENSMUSG00000031485.16	Plpbp	chr8	protein_coding	pyridoxal phosphate binding protein
chr8	27542362	27543140	+	27542362	27543314	A3SS	0.5	50	50	ENSMUST00000033875.10	ENSMUSG00000031485.16	Plpbp	chr8	protein_coding	pyridoxal phosphate binding protein
chr8	27533130	27535056	+	27532741	27535056	A5SS	0.5	50	50	ENSMUST00000033875.10	ENSMUSG00000031485.16	Plpbp	chr8	protein_coding	pyridoxal phosphate binding protein
chr8	27535163	27535952	+	27535163	27535426	A3SS&ES	0.5	50	50	ENSMUST00000211490.2	ENSMUSG00000031485.16	Plpbp	chr8	protein_coding	pyridoxal phosphate binding protein
chr8	27535163	27535952	+	27535461	27535952	5pMXE	0.5	50	50	ENSMUST00000210225.2	ENSMUSG00000031485.16	Plpbp	chr8	protein_coding	pyridoxal phosphate binding protein
chr8	27604534	27605265	+	27604534	27608752	A3SS	0.5	50	50	ENSMUST00000178514.8	ENSMUSG00000031486.16	Adgra2	chr8	protein_coding	adhesion G protein-coupled receptor A2
chr8	27608879	27609852	+	27608879	27609162	A3SS&ES	0.5	50	50	ENSMUST00000178514.8	ENSMUSG00000031486.16	Adgra2	chr8	protein_coding	adhesion G protein-coupled receptor A2
chr8	27607543	27608752	+	27604534	27608752	A5SS	0.5	50	50	ENSMUST00000178514.8	ENSMUSG00000031486.16	Adgra2	chr8	protein_coding	adhesion G protein-coupled receptor A2
chr8	27605489	27605817	+	27605489	27605683	A3SS	0.5	50	50	ENSMUST00000033876.14	ENSMUSG00000031486.16	Adgra2	chr8	protein_coding	adhesion G protein-coupled receptor A2
chr8	27614648	27615478	-	27614648	27615848	A5SS	0.5	50	50	ENSMUST00000033877.6	ENSMUSG00000031487.6	Brf2	chr8	protein_coding	BRF2, RNA polymerase III transcription initiation factor 50kDa subunit
chr8	27617547	27618253	-	27617547	27618449	A5SS	0.25	50	50	ENSMUST00000033877.6	ENSMUSG00000031487.6	Brf2	chr8	protein_coding	BRF2, RNA polymerase III transcription initiation factor 50kDa subunit
chr8	27617547	27618343	-	27617547	27618449	A5SS	0.25	50	50	ENSMUST00000033877.6	ENSMUSG00000031487.6	Brf2	chr8	protein_coding	BRF2, RNA polymerase III transcription initiation factor 50kDa subunit
chr8	27617547	27618525	-	27617547	27618449	A5SS	0.25	50	50	ENSMUST00000033877.6	ENSMUSG00000031487.6	Brf2	chr8	protein_coding	BRF2, RNA polymerase III transcription initiation factor 50kDa subunit
chr8	27617547	27618253	-	27617547	27618525	A5SS	0.25	50	50	ENSMUST00000210230.2	ENSMUSG00000031487.6	Brf2	chr8	protein_coding	BRF2, RNA polymerase III transcription initiation factor 50kDa subunit
chr8	27617547	27618343	-	27617547	27618525	A5SS	0.25	50	50	ENSMUST00000210230.2	ENSMUSG00000031487.6	Brf2	chr8	protein_coding	BRF2, RNA polymerase III transcription initiation factor 50kDa subunit
chr8	27617547	27618343	-	27617547	27618253	A5SS	0.25	50	50	ENSMUST00000211151.2	ENSMUSG00000031487.6	Brf2	chr8	protein_coding	BRF2, RNA polymerase III transcription initiation factor 50kDa subunit
chr8	27640831	27644174	-	27640831;27643187	27641625;27644174	ES	0.5	50	50	ENSMUST00000054212.7	ENSMUSG00000031488.15	Rab11fip1	chr8	protein_coding	RAB11 family interacting protein 1 (class I)
chr8	27633422;27639122	27639064;27640723	-	27633422	27640723	cassetteExon	0.5	100	100	ENSMUST00000054212.7	ENSMUSG00000031488.15	Rab11fip1	chr8	protein_coding	RAB11 family interacting protein 1 (class I)
chr8	27652813	27664237	-	27646697	27664237	A3SS	0.33	50	50	ENSMUST00000054212.7	ENSMUSG00000031488.15	Rab11fip1	chr8	protein_coding	RAB11 family interacting protein 1 (class I)
chr8	27657110	27664237	-	27646697	27664237	A3SS	0.33	50	50	ENSMUST00000054212.7	ENSMUSG00000031488.15	Rab11fip1	chr8	protein_coding	RAB11 family interacting protein 1 (class I)
chr8	27643187	27644174	-	27640831	27644174	A3SS	0.5	50	50	ENSMUST00000033878.14	ENSMUSG00000031488.15	Rab11fip1	chr8	protein_coding	RAB11 family interacting protein 1 (class I)
chr8	27640831	27641625	-	27640831	27644174	A5SS	0.5	50	50	ENSMUST00000033878.14	ENSMUSG00000031488.15	Rab11fip1	chr8	protein_coding	RAB11 family interacting protein 1 (class I)
chr8	27657110	27664237	-	27652813	27664237	A3SS	0.33	50	50	ENSMUST00000210919.2	ENSMUSG00000031488.15	Rab11fip1	chr8	protein_coding	RAB11 family interacting protein 1 (class I)
chr8	27692679	27713716	-	27692491	27713716	A3SS	0.5	50	50	ENSMUST00000211002.2	ENSMUSG00000039720.8	Got1l1	chr8	protein_coding	glutamic-oxaloacetic transaminase 1-like 1
chr8	27716497	27716754	-	27716556	27716754	A3SS	0.5	50	50	ENSMUST00000081438.10	ENSMUSG00000031489.16	Adrb3	chr8	protein_coding	adrenergic receptor, beta 3
chr8	27716924	27717285	-	27716821	27717285	A3SS	0.5	50	50	ENSMUST00000081438.10	ENSMUSG00000031489.16	Adrb3	chr8	protein_coding	adrenergic receptor, beta 3
chr8	27757117	27763351	+	27750578	27763351	A5SS	0.5	50	50	ENSMUST00000033880.7	ENSMUSG00000031490.7	Eif4ebp1	chr8	protein_coding	eukaryotic translation initiation factor 4E binding protein 1
chr8	27875224	27883328	+	27875224;27876854	27876810;27883328	ES	0.5	50	50	ENSMUST00000060943.5	ENSMUSG00000031492.14	Chrnb3	chr8	protein_coding	cholinergic receptor, nicotinic, beta polypeptide 3
chr8	28099244	28100153	+	28099244	28100210	A3SS	0.5	50	50	ENSMUST00000209669.2	ENSMUSG00000110333.2	Gm45861	chr8	protein_coding	predicted gene 45861
chr8	28085684	28089529	+	28085684	28094404	A3SS	0.5	50	50	ENSMUST00000210427.2	ENSMUSG00000110333.2	Gm45861	chr8	protein_coding	predicted gene 45861
chr8	28091728	28094404	+	28085684	28094404	A5SS	0.5	50	50	ENSMUST00000210427.2	ENSMUSG00000110333.2	Gm45861	chr8	protein_coding	predicted gene 45861
chr8	29214434	29231508	-	29214434;29215190	29215176;29231508	ES	0.5	50	50	ENSMUST00000168630.4	ENSMUSG00000063626.7	Unc5d	chr8	protein_coding	unc-5 netrin receptor D
chr8	29249150	29251727	-	29249150;29250920	29250753;29251727	ES	0.5	50	50	ENSMUST00000168630.4	ENSMUSG00000063626.7	Unc5d	chr8	protein_coding	unc-5 netrin receptor D
chr8	29165467	29173191	-	29165467	29173131	A5SS	0.5	50	50	ENSMUST00000168630.4	ENSMUSG00000063626.7	Unc5d	chr8	protein_coding	unc-5 netrin receptor D
chr8	29210022	29214288	-	29210022	29214249	A5SS	0.5	50	50	ENSMUST00000168630.4	ENSMUSG00000063626.7	Unc5d	chr8	protein_coding	unc-5 netrin receptor D
chr8	29214434	29248986	-	29214434;29231540	29231508;29248986	ES	0.5	50	50	ENSMUST00000210785.2	ENSMUSG00000063626.7	Unc5d	chr8	protein_coding	unc-5 netrin receptor D
chr8	29214434	29215176	-	29214434	29248986	A5SS	0.33	50	50	ENSMUST00000211448.2	ENSMUSG00000063626.7	Unc5d	chr8	protein_coding	unc-5 netrin receptor D
chr8	31579923	31581833	+	31579923;31580330	31580188;31581833	ES	0.5	50	50	ENSMUST00000036631.14	ENSMUSG00000039661.15	Dusp26	chr8	protein_coding	dual specificity phosphatase 26 (putative)
chr8	31602200;31604725	31604602;31608459	+	31602200	31608459	cassetteExon	0.5	100	100	ENSMUST00000046941.8	ENSMUSG00000039328.12	Rnf122	chr8	protein_coding	ring finger protein 122
chr8	31615235	31618280	+	31615235	31618283	A3SS	0.5	50	50	ENSMUST00000046941.8	ENSMUSG00000039328.12	Rnf122	chr8	protein_coding	ring finger protein 122
chr8	31650015	31651819	+	31650077	31651819	A5SS	0.5	50	50	ENSMUST00000098842.3	ENSMUSG00000031577.11	Tti2	chr8	protein_coding	TELO2 interacting protein 2
chr8	31691532	31749928	+	31691532;31726458	31725623;31749928	ES	0.5	50	50	ENSMUST00000066173.12	ENSMUSG00000046152.17	Fut10	chr8	protein_coding	fucosyltransferase 10
chr8	31677490;31678434	31678330;31684982	+	31677490	31684982	cassetteExon	0.5	100	100	ENSMUST00000066173.12	ENSMUSG00000046152.17	Fut10	chr8	protein_coding	fucosyltransferase 10
chr8	31691532;31715929	31715830;31725623	+	31691532	31725623	cassetteExon	0.5	100	100	ENSMUST00000066173.12	ENSMUSG00000046152.17	Fut10	chr8	protein_coding	fucosyltransferase 10
chr8	31691532	31749928	+	31691532	31725623	3pMXE	0.33	50	50	ENSMUST00000161788.8	ENSMUSG00000046152.17	Fut10	chr8	protein_coding	fucosyltransferase 10
chr8	31691532	31715830	+	31691532	31749928	A3SS	0.33	50	50	ENSMUST00000110527.9	ENSMUSG00000046152.17	Fut10	chr8	protein_coding	fucosyltransferase 10
chr8	31726458	31749928	+	31691532	31749928	A5SS	0.5	50	50	ENSMUST00000110527.9	ENSMUSG00000046152.17	Fut10	chr8	protein_coding	fucosyltransferase 10
chr8	32095938	32149377	-	32095938;32114654	32114406;32149377	ES	0.33	50	50	ENSMUST00000210303.2	ENSMUSG00000110329.2	Gm45304	chr8	lncRNA	predicted gene 45304
chr8	32115580	32149377	-	32114654	32149377	A3SS	0.33	50	50	ENSMUST00000210303.2	ENSMUSG00000110329.2	Gm45304	chr8	lncRNA	predicted gene 45304
chr8	32115580	32149377	-	32095938	32149377	A3SS	0.33	50	50	ENSMUST00000211064.2	ENSMUSG00000110329.2	Gm45304	chr8	lncRNA	predicted gene 45304
chr8	32316383	32327698	-	32316383;32321256	32321233;32327698	ES	0.33	50	50	ENSMUST00000207470.3	ENSMUSG00000062991.10	Nrg1	chr8	protein_coding	neuregulin 1
chr8	32458213	32782861	-	32458213	32499038	5pMXE	0.25	50	50	ENSMUST00000207470.3	ENSMUSG00000062991.10	Nrg1	chr8	protein_coding	neuregulin 1
chr8	32458213	33373544	-	32458213	32499038	5pMXE	0.25	50	50	ENSMUST00000207470.3	ENSMUSG00000062991.10	Nrg1	chr8	protein_coding	neuregulin 1
chr8	32458213	33374791	-	32458213	32499038	5pMXE	0.25	50	50	ENSMUST00000207470.3	ENSMUSG00000062991.10	Nrg1	chr8	protein_coding	neuregulin 1
chr8	32308710;32309222	32309081;32311270	-	32308710	32311270	cassetteExon	0.5	100	100	ENSMUST00000207470.3	ENSMUSG00000062991.10	Nrg1	chr8	protein_coding	neuregulin 1
chr8	32316383;32323258	32323181;32327698	-	32316383;32321256	32321233;32327698	MXE	0.5	100	100	ENSMUST00000207470.3	ENSMUSG00000062991.10	Nrg1	chr8	protein_coding	neuregulin 1
chr8	32316383;32328356	32328289;32339338	-	32316383;32327756	32321233;32339338	MXE	0.5	100	100	ENSMUST00000207470.3	ENSMUSG00000062991.10	Nrg1	chr8	protein_coding	neuregulin 1
chr8	32327756;32328356	32328289;32339338	-	32327756	32339338	cassetteExon	0.5	100	100	ENSMUST00000207470.3	ENSMUSG00000062991.10	Nrg1	chr8	protein_coding	neuregulin 1
chr8	32339467	32376334	-	32339467	32437012	A5SS	0.25	50	50	ENSMUST00000207470.3	ENSMUSG00000062991.10	Nrg1	chr8	protein_coding	neuregulin 1
chr8	32339467	32407565	-	32339467	32437012	A5SS	0.25	50	50	ENSMUST00000207470.3	ENSMUSG00000062991.10	Nrg1	chr8	protein_coding	neuregulin 1
chr8	32316383;32323258	32323181;32327698	-	32316383	32327698	cassetteExon	0.5	100	100	ENSMUST00000207417.3	ENSMUSG00000062991.10	Nrg1	chr8	protein_coding	neuregulin 1
chr8	32316383;32328356	32328289;32339338	-	32316383;32327756	32327698;32339338	MXE	0.5	100	100	ENSMUST00000207417.3	ENSMUSG00000062991.10	Nrg1	chr8	protein_coding	neuregulin 1
chr8	32458213	33374791	-	32458213	33373544	5pMXE	0.25	50	50	ENSMUST00000209107.4	ENSMUSG00000062991.10	Nrg1	chr8	protein_coding	neuregulin 1
chr8	32458213	32782861	-	32458213	33373544	A5SS	0.25	50	50	ENSMUST00000209107.4	ENSMUSG00000062991.10	Nrg1	chr8	protein_coding	neuregulin 1
chr8	32458213	32782861	-	32458213	33374791	A5SS	0.25	50	50	ENSMUST00000238791.2	ENSMUSG00000062991.10	Nrg1	chr8	protein_coding	neuregulin 1
chr8	32316383;32327756	32327698;32328289	-	32316383	32328289	cassetteExon	0.5	100	100	ENSMUST00000208617.3	ENSMUSG00000062991.10	Nrg1	chr8	protein_coding	neuregulin 1
chr8	32316383	32321233	-	32316383	32328289	A5SS	0.25	50	50	ENSMUST00000208617.3	ENSMUSG00000062991.10	Nrg1	chr8	protein_coding	neuregulin 1
chr8	32316383	32323181	-	32316383	32328289	A5SS	0.25	50	50	ENSMUST00000208617.3	ENSMUSG00000062991.10	Nrg1	chr8	protein_coding	neuregulin 1
chr8	32339467	32448540	-	32339467	32407565	5pMXE	0.25	50	50	ENSMUST00000073884.7	ENSMUSG00000062991.10	Nrg1	chr8	protein_coding	neuregulin 1
chr8	32339467	32376334	-	32339467	32407565	A5SS	0.25	50	50	ENSMUST00000073884.7	ENSMUSG00000062991.10	Nrg1	chr8	protein_coding	neuregulin 1
chr8	32316383;32328356	32328289;32339338	-	32316383;32327756	32323181;32339338	MXE	0.5	100	100	ENSMUST00000208488.2	ENSMUSG00000062991.10	Nrg1	chr8	protein_coding	neuregulin 1
chr8	32439995	32448540	-	32339467	32448540	A3SS	0.5	50	50	ENSMUST00000239067.2	ENSMUSG00000062991.10	Nrg1	chr8	protein_coding	neuregulin 1
chr8	32339467	32376334	-	32339467	32448540	A5SS	0.25	50	50	ENSMUST00000239067.2	ENSMUSG00000062991.10	Nrg1	chr8	protein_coding	neuregulin 1
chr8	32339467	32437012	-	32339467	32448540	A5SS	0.25	50	50	ENSMUST00000239067.2	ENSMUSG00000062991.10	Nrg1	chr8	protein_coding	neuregulin 1
chr8	32308710	32311270	-	32309222	32311270	3pMXE	0.5	50	50	ENSMUST00000238816.2	ENSMUSG00000062991.10	Nrg1	chr8	protein_coding	neuregulin 1
chr8	32316383	32328289	-	32327756	32328289	3pMXE	0.5	50	50	ENSMUST00000239080.2	ENSMUSG00000062991.10	Nrg1	chr8	protein_coding	neuregulin 1
chr8	33819244	33819876	-	33819244	33824204	A5SS	0.5	50	50	ENSMUST00000033991.13	ENSMUSG00000031583.14	Wrn	chr8	protein_coding	Werner syndrome RecQ like helicase
chr8	33843427	33851196	-	33843427	33875480	A5SS	0.33	50	50	ENSMUST00000033991.13	ENSMUSG00000031583.14	Wrn	chr8	protein_coding	Werner syndrome RecQ like helicase
chr8	33843427	33875370	-	33843427	33875480	A5SS	0.33	50	50	ENSMUST00000033991.13	ENSMUSG00000031583.14	Wrn	chr8	protein_coding	Werner syndrome RecQ like helicase
chr8	33843427;33851296	33851196;33875370	-	33843427	33875370	cassetteExon	0.5	100	100	ENSMUST00000033990.7	ENSMUSG00000031583.14	Wrn	chr8	protein_coding	Werner syndrome RecQ like helicase
chr8	34007455	34017252	+	34007072	34017252	A5SS	0.5	50	50	ENSMUST00000149399.8	ENSMUSG00000009628.15	Tex15	chr8	protein_coding	testis expressed gene 15
chr8	34055233	34067381	+	34055233	34060603	3pMXE	0.5	50	50	ENSMUST00000124496.8	ENSMUSG00000009628.15	Tex15	chr8	protein_coding	testis expressed gene 15
chr8	34125387	34126163	-	34125387	34128508	A5SS	0.5	50	50	ENSMUST00000095349.6	ENSMUSG00000052906.8	Ubxn8	chr8	protein_coding	UBX domain protein 8
chr8	34143807	34159181	+	34142598	34159181	A5SS	0.33	50	50	ENSMUST00000154745.8	ENSMUSG00000031584.17	Gsr	chr8	protein_coding	glutathione reductase
chr8	34159062	34159181	+	34142598	34159181	A5SS	0.33	50	50	ENSMUST00000154745.8	ENSMUSG00000031584.17	Gsr	chr8	protein_coding	glutathione reductase
chr8	34159062	34159181	+	34143807	34159181	A5SS	0.33	50	50	ENSMUST00000033992.9	ENSMUSG00000031584.17	Gsr	chr8	protein_coding	glutathione reductase
chr8	34221105	34221670	-	34221105	34221817	A5SS	0.5	50	50	ENSMUST00000079376.12	ENSMUSG00000049476.13	1700104B16Rik	chr8	lncRNA	RIKEN cDNA 1700104B16 gene
chr8	34222157	34225762	+	34222016	34225762	A5SS	0.2	50	50	ENSMUST00000170705.8	ENSMUSG00000031585.14	Gtf2e2	chr8	protein_coding	general transcription factor II E, polypeptide 2 (beta subunit)
chr8	34222543	34225762	+	34222016	34225762	A5SS	0.2	50	50	ENSMUST00000170705.8	ENSMUSG00000031585.14	Gtf2e2	chr8	protein_coding	general transcription factor II E, polypeptide 2 (beta subunit)
chr8	34222662	34225762	+	34222016	34225762	A5SS	0.2	50	50	ENSMUST00000170705.8	ENSMUSG00000031585.14	Gtf2e2	chr8	protein_coding	general transcription factor II E, polypeptide 2 (beta subunit)
chr8	34223556	34225762	+	34222016	34225762	A5SS	0.2	50	50	ENSMUST00000170705.8	ENSMUSG00000031585.14	Gtf2e2	chr8	protein_coding	general transcription factor II E, polypeptide 2 (beta subunit)
chr8	34255058	34265972	+	34252131	34265972	A5SS	0.5	50	50	ENSMUST00000170705.8	ENSMUSG00000031585.14	Gtf2e2	chr8	protein_coding	general transcription factor II E, polypeptide 2 (beta subunit)
chr8	34222543	34225762	+	34222157	34225762	A5SS	0.2	50	50	ENSMUST00000167264.8	ENSMUSG00000031585.14	Gtf2e2	chr8	protein_coding	general transcription factor II E, polypeptide 2 (beta subunit)
chr8	34222662	34225762	+	34222157	34225762	A5SS	0.2	50	50	ENSMUST00000167264.8	ENSMUSG00000031585.14	Gtf2e2	chr8	protein_coding	general transcription factor II E, polypeptide 2 (beta subunit)
chr8	34223556	34225762	+	34222157	34225762	A5SS	0.2	50	50	ENSMUST00000167264.8	ENSMUSG00000031585.14	Gtf2e2	chr8	protein_coding	general transcription factor II E, polypeptide 2 (beta subunit)
chr8	34222662	34225762	+	34222543	34225762	A5SS	0.2	50	50	ENSMUST00000187392.7	ENSMUSG00000031585.14	Gtf2e2	chr8	protein_coding	general transcription factor II E, polypeptide 2 (beta subunit)
chr8	34223556	34225762	+	34222543	34225762	A5SS	0.2	50	50	ENSMUST00000187392.7	ENSMUSG00000031585.14	Gtf2e2	chr8	protein_coding	general transcription factor II E, polypeptide 2 (beta subunit)
chr8	34223556	34225762	+	34222662	34225762	A5SS	0.2	50	50	ENSMUST00000190675.2	ENSMUSG00000031585.14	Gtf2e2	chr8	protein_coding	general transcription factor II E, polypeptide 2 (beta subunit)
chr8	34285178	34324332	-	34285178;34296878	34296745;34324332	ES	0.5	50	50	ENSMUST00000053251.12	ENSMUSG00000031586.18	Rbpms	chr8	protein_coding	RNA binding protein gene with multiple splicing
chr8	34274214;34279523	34279420;34285110	-	34274214	34285110	cassetteExon	0.5	100	100	ENSMUST00000053251.12	ENSMUSG00000031586.18	Rbpms	chr8	protein_coding	RNA binding protein gene with multiple splicing
chr8	34285178;34287031	34286902;34296745	-	34285178	34296745	cassetteExon	0.5	100	100	ENSMUST00000053251.12	ENSMUSG00000031586.18	Rbpms	chr8	protein_coding	RNA binding protein gene with multiple splicing
chr8	34294210	34296745	-	34285178	34296745	A3SS	0.33	50	50	ENSMUST00000053251.12	ENSMUSG00000031586.18	Rbpms	chr8	protein_coding	RNA binding protein gene with multiple splicing
chr8	34324482	34333501	-	34324482	34353014	A5SS	0.25	50	50	ENSMUST00000053251.12	ENSMUSG00000031586.18	Rbpms	chr8	protein_coding	RNA binding protein gene with multiple splicing
chr8	34324482	34334647	-	34324482	34353014	A5SS	0.25	50	50	ENSMUST00000053251.12	ENSMUSG00000031586.18	Rbpms	chr8	protein_coding	RNA binding protein gene with multiple splicing
chr8	34324482	34343638	-	34324482	34353014	A5SS	0.25	50	50	ENSMUST00000053251.12	ENSMUSG00000031586.18	Rbpms	chr8	protein_coding	RNA binding protein gene with multiple splicing
chr8	34356432	34379637	-	34356432	34419504	A5SS	0.25	50	50	ENSMUST00000053251.12	ENSMUSG00000031586.18	Rbpms	chr8	protein_coding	RNA binding protein gene with multiple splicing
chr8	34356432	34381635	-	34356432	34419504	A5SS	0.25	50	50	ENSMUST00000053251.12	ENSMUSG00000031586.18	Rbpms	chr8	protein_coding	RNA binding protein gene with multiple splicing
chr8	34356432	34419203	-	34356432	34419504	A5SS	0.25	50	50	ENSMUST00000053251.12	ENSMUSG00000031586.18	Rbpms	chr8	protein_coding	RNA binding protein gene with multiple splicing
chr8	34285178	34286902	-	34285178	34324332	A5SS	0.33	50	50	ENSMUST00000033994.15	ENSMUSG00000031586.18	Rbpms	chr8	protein_coding	RNA binding protein gene with multiple splicing
chr8	34324482	34343638	-	34324482	34334647	5pMXE	0.25	50	50	ENSMUST00000182256.8	ENSMUSG00000031586.18	Rbpms	chr8	protein_coding	RNA binding protein gene with multiple splicing
chr8	34324482	34333501	-	34324482	34334647	A5SS	0.25	50	50	ENSMUST00000182256.8	ENSMUSG00000031586.18	Rbpms	chr8	protein_coding	RNA binding protein gene with multiple splicing
chr8	34294210	34296745	-	34287031	34296745	A3SS	0.33	50	50	ENSMUST00000183336.8	ENSMUSG00000031586.18	Rbpms	chr8	protein_coding	RNA binding protein gene with multiple splicing
chr8	34324482	34333501	-	34324482	34343638	A5SS	0.25	50	50	ENSMUST00000182184.8	ENSMUSG00000031586.18	Rbpms	chr8	protein_coding	RNA binding protein gene with multiple splicing
chr8	34285178	34296745	-	34285178	34286902	5pMXE	0.33	50	50	ENSMUST00000183122.2	ENSMUSG00000031586.18	Rbpms	chr8	protein_coding	RNA binding protein gene with multiple splicing
chr8	34285178	34324332	-	34296878	34324332	3pMXE	0.5	50	50	ENSMUST00000183062.2	ENSMUSG00000031586.18	Rbpms	chr8	protein_coding	RNA binding protein gene with multiple splicing
chr8	34356432	34381635	-	34356432	34379637	5pMXE	0.25	50	50	ENSMUST00000183088.2	ENSMUSG00000031586.18	Rbpms	chr8	protein_coding	RNA binding protein gene with multiple splicing
chr8	34356432	34419203	-	34356432	34379637	5pMXE	0.25	50	50	ENSMUST00000183088.2	ENSMUSG00000031586.18	Rbpms	chr8	protein_coding	RNA binding protein gene with multiple splicing
chr8	34356432	34381635	-	34356432	34419203	A5SS	0.25	50	50	ENSMUST00000231786.2	ENSMUSG00000031586.18	Rbpms	chr8	protein_coding	RNA binding protein gene with multiple splicing
chr8	34521912	34522566	+	34516497	34522566	A5SS	0.5	50	50	ENSMUST00000139529.2	ENSMUSG00000054618.9	Gm9951	chr8	lncRNA	predicted gene 9951
chr8	34560830	34564343	-	34560830	34562038	5pMXE	0.5	50	50	ENSMUST00000155296.8	ENSMUSG00000031516.12	Dctn6	chr8	protein_coding	dynactin 6
chr8	34557996;34559267	34559158;34559665	-	34557996	34559665	cassetteExon	0.5	100	100	ENSMUST00000155296.8	ENSMUSG00000031516.12	Dctn6	chr8	protein_coding	dynactin 6
chr8	34560830	34564343	-	34560830;34562126	34562038;34564343	ES	0.5	50	50	ENSMUST00000033913.11	ENSMUSG00000031516.12	Dctn6	chr8	protein_coding	dynactin 6
chr8	34564448;34566255	34566073;34573496	-	34564448	34573496	cassetteExon	0.5	100	100	ENSMUST00000033913.11	ENSMUSG00000031516.12	Dctn6	chr8	protein_coding	dynactin 6
chr8	34564448;34572193	34572140;34573496	-	34564448	34573496	cassetteExon	0.5	100	100	ENSMUST00000033913.11	ENSMUSG00000031516.12	Dctn6	chr8	protein_coding	dynactin 6
chr8	34564448;34572252	34572140;34573496	-	34564448	34573496	cassetteExon	0.5	100	100	ENSMUST00000033913.11	ENSMUSG00000031516.12	Dctn6	chr8	protein_coding	dynactin 6
chr8	34573560	34574729	-	34573560	34575573	A5SS	0.5	50	50	ENSMUST00000033913.11	ENSMUSG00000031516.12	Dctn6	chr8	protein_coding	dynactin 6
chr8	34564448;34566255	34566073;34573496	-	34564448;34572252	34572140;34573496	MXE	0.5	100	100	ENSMUST00000117243.8	ENSMUSG00000031516.12	Dctn6	chr8	protein_coding	dynactin 6
chr8	34572193	34573496	-	34572252	34573496	A3SS	0.25	50	50	ENSMUST00000117243.8	ENSMUSG00000031516.12	Dctn6	chr8	protein_coding	dynactin 6
chr8	34564448;34572193	34572140;34573496	-	34564448;34566255	34566073;34573496	MXE	0.5	100	100	ENSMUST00000131839.8	ENSMUSG00000031516.12	Dctn6	chr8	protein_coding	dynactin 6
chr8	34560830	34564343	-	34562126	34564343	3pMXE	0.5	50	50	ENSMUST00000153537.2	ENSMUSG00000031516.12	Dctn6	chr8	protein_coding	dynactin 6
chr8	34621990	34622174	+	34621990	34628349	A3SS	0.5	50	50	ENSMUST00000239436.2	ENSMUSG00000031532.8	Saraf	chr8	protein_coding	store-operated calcium entry-associated regulatory factor
chr8	34625709	34628349	+	34621990	34628349	A5SS	0.5	50	50	ENSMUST00000239436.2	ENSMUSG00000031532.8	Saraf	chr8	protein_coding	store-operated calcium entry-associated regulatory factor
chr8	35298845	35305538	-	35301748	35305538	A3SS&ES	0.5	50	50	ENSMUST00000033929.6	ENSMUSG00000031529.6	Tnks	chr8	protein_coding	tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
chr8	35385628	35385724	-	35385628	35407850	A5SS	0.5	50	50	ENSMUST00000033929.6	ENSMUSG00000031529.6	Tnks	chr8	protein_coding	tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
chr8	35434213	35434669	+	35434361	35434669	A5SS&ES	0.5	50	50	ENSMUST00000210603.2	ENSMUSG00000054247.7	Gm9939	chr8	lncRNA	predicted gene 9939
chr8	35842959	35851138	+	35843095	35851138	A5SS	0.33	50	50	ENSMUST00000210337.2	ENSMUSG00000046794.10	Ppp1r3b	chr8	protein_coding	protein phosphatase 1, regulatory subunit 3B
chr8	35843907	35851138	+	35843095	35851138	A5SS	0.33	50	50	ENSMUST00000210337.2	ENSMUSG00000046794.10	Ppp1r3b	chr8	protein_coding	protein phosphatase 1, regulatory subunit 3B
chr8	35842959;35843907	35843721;35851138	+	35842959	35851138	cassetteExon	0.5	100	100	ENSMUST00000070481.8	ENSMUSG00000046794.10	Ppp1r3b	chr8	protein_coding	protein phosphatase 1, regulatory subunit 3B
chr8	35843907	35845011	+	35843907	35851138	A3SS	0.5	50	50	ENSMUST00000211648.2	ENSMUSG00000046794.10	Ppp1r3b	chr8	protein_coding	protein phosphatase 1, regulatory subunit 3B
chr8	35958533	35963143	-	35958533	35962426	5pMXE	0.33	50	50	ENSMUST00000033927.8	ENSMUSG00000031527.8	Eri1	chr8	protein_coding	exoribonuclease 1
chr8	35958533	35961795	-	35958533	35962426	A5SS	0.33	50	50	ENSMUST00000033927.8	ENSMUSG00000031527.8	Eri1	chr8	protein_coding	exoribonuclease 1
chr8	35958533	35961795	-	35958533	35963143	A5SS	0.33	50	50	ENSMUST00000210884.2	ENSMUSG00000031527.8	Eri1	chr8	protein_coding	exoribonuclease 1
chr8	36131948;36138985	36138876;36143884	+	36131948	36143884	cassetteExon	0.5	100	100	ENSMUST00000037666.6	ENSMUSG00000070056.7	Mfhas1	chr8	protein_coding	malignant fibrous histiocytoma amplified sequence 1
chr8	36058240	36131822	+	36058512	36131822	A5SS	0.33	50	50	ENSMUST00000037666.6	ENSMUSG00000070056.7	Mfhas1	chr8	protein_coding	malignant fibrous histiocytoma amplified sequence 1
chr8	36074578	36131822	+	36058512	36131822	A5SS	0.33	50	50	ENSMUST00000037666.6	ENSMUSG00000070056.7	Mfhas1	chr8	protein_coding	malignant fibrous histiocytoma amplified sequence 1
chr8	36074578	36131822	+	36058240	36131822	A5SS	0.33	50	50	ENSMUST00000209953.2	ENSMUSG00000070056.7	Mfhas1	chr8	protein_coding	malignant fibrous histiocytoma amplified sequence 1
chr8	36192671	36198016	+	36192671	36193456	3pMXE	0.33	50	50	ENSMUST00000210976.2	ENSMUSG00000109714.2	Gm35021	chr8	lncRNA	predicted gene, 35021
chr8	36192671	36215704	+	36192671	36193456	3pMXE	0.33	50	50	ENSMUST00000210976.2	ENSMUSG00000109714.2	Gm35021	chr8	lncRNA	predicted gene, 35021
chr8	36191622	36191733	+	36191622	36191716	A3SS	0.5	50	50	ENSMUST00000211555.2	ENSMUSG00000109714.2	Gm35021	chr8	lncRNA	predicted gene, 35021
chr8	36192671	36198016	+	36192671	36215704	A3SS	0.33	50	50	ENSMUST00000210105.2	ENSMUSG00000109714.2	Gm35021	chr8	lncRNA	predicted gene, 35021
chr8	36627000	36627539	+	36627000	36627085	A3SS	0.5	50	50	ENSMUST00000209819.2	ENSMUSG00000109704.2	Gm38414	chr8	lncRNA	predicted gene, 38414
chr8	36626733	36626901	+	36623562	36626901	A5SS	0.5	50	50	ENSMUST00000209819.2	ENSMUSG00000109704.2	Gm38414	chr8	lncRNA	predicted gene, 38414
chr8	36642213	36643018	-	36641322	36643018	A3SS	0.5	50	50	ENSMUST00000210407.2	ENSMUSG00000110321.2	Gm39164	chr8	lncRNA	predicted gene, 39164
chr8	36972879	36978727	+	36972879;36975566	36975479;36978727	ES	0.33	50	50	ENSMUST00000135373.8	ENSMUSG00000039620.18	Trmt9b	chr8	protein_coding	tRNA methyltransferase 9B
chr8	36972879;36977478	36977342;36978727	+	36972879;36975566	36975479;36978727	MXE	0.5	100	100	ENSMUST00000135373.8	ENSMUSG00000039620.18	Trmt9b	chr8	protein_coding	tRNA methyltransferase 9B
chr8	36924792	36925312	+	36925045	36925312	A5SS	0.5	50	50	ENSMUST00000135373.8	ENSMUSG00000039620.18	Trmt9b	chr8	protein_coding	tRNA methyltransferase 9B
chr8	36972879;36977478	36977342;36978727	+	36972879	36978727	cassetteExon	0.5	100	100	ENSMUST00000147525.9	ENSMUSG00000039620.18	Trmt9b	chr8	protein_coding	tRNA methyltransferase 9B
chr8	37066594	37199742	-	37066594	37080713	5pMXE	0.33	50	50	ENSMUST00000033923.14	ENSMUSG00000031523.17	Dlc1	chr8	protein_coding	deleted in liver cancer 1
chr8	37066594	37230799	-	37066594	37080713	5pMXE	0.33	50	50	ENSMUST00000033923.14	ENSMUSG00000031523.17	Dlc1	chr8	protein_coding	deleted in liver cancer 1
chr8	37066594	37230799	-	37066594	37199742	5pMXE	0.33	50	50	ENSMUST00000098826.10	ENSMUSG00000031523.17	Dlc1	chr8	protein_coding	deleted in liver cancer 1
chr8	37405912	37420099	-	37405912	37419275	5pMXE	0.5	50	50	ENSMUST00000163663.3	ENSMUSG00000031523.17	Dlc1	chr8	protein_coding	deleted in liver cancer 1
chr8	37816064	37816940	-	37814787	37816940	A3SS	0.5	50	50	ENSMUST00000210944.2	ENSMUSG00000110312.2	Gm45368	chr8	lncRNA	predicted gene 45368
chr8	38012647	38030295	-	38006857	38030295	A3SS	0.5	50	50	ENSMUST00000118896.2	ENSMUSG00000039539.14	Sgcz	chr8	protein_coding	sarcoglycan zeta
chr8	38006857	38007199	-	38006857	38030295	A5SS	0.5	50	50	ENSMUST00000118896.2	ENSMUSG00000039539.14	Sgcz	chr8	protein_coding	sarcoglycan zeta
chr8	39513838	39534776	+	39513838;39530462	39530345;39534776	ES	0.5	50	50	ENSMUST00000239508.1	ENSMUSG00000118664.1	Tusc3	chr8	protein_coding	--
chr8	39538670	39593683	+	39538670;39564168	39564079;39593683	ES	0.5	50	50	ENSMUST00000239508.1	ENSMUSG00000118664.1	Tusc3	chr8	protein_coding	--
chr8	39610391;39614111	39614048;39617867	+	39610391	39617867	cassetteExon	0.5	100	100	ENSMUST00000239508.1	ENSMUSG00000118664.1	Tusc3	chr8	protein_coding	--
chr8	40077376;40080795	40080740;40084322	-	40077376	40084322	cassetteExon	0.5	100	100	ENSMUST00000026021.14	ENSMUSG00000025044.17	Msr1	chr8	protein_coding	macrophage scavenger receptor 1
chr8	40059023	40061126	-	40042519	40061126	A3SS	0.5	50	50	ENSMUST00000026021.14	ENSMUSG00000025044.17	Msr1	chr8	protein_coding	macrophage scavenger receptor 1
chr8	40077376	40080740	-	40077122	40080740	A3SS	0.5	50	50	ENSMUST00000210525.2	ENSMUSG00000025044.17	Msr1	chr8	protein_coding	macrophage scavenger receptor 1
chr8	40077376	40084322	-	40080795	40084322	A3SS&ES	0.5	50	50	ENSMUST00000210525.2	ENSMUSG00000025044.17	Msr1	chr8	protein_coding	macrophage scavenger receptor 1
chr8	40734255	40761171	-	40734255	40739463	5pMXE	0.5	50	50	ENSMUST00000034014.14	ENSMUSG00000031603.15	Fgf20	chr8	protein_coding	fibroblast growth factor 20
chr8	40807426	40809897	+	40807426	40819190	A3SS	0.5	50	50	ENSMUST00000136835.2	ENSMUSG00000039478.16	Micu3	chr8	protein_coding	mitochondrial calcium uptake family, member 3
chr8	40812489	40819190	+	40807426	40819190	A5SS	0.5	50	50	ENSMUST00000136835.2	ENSMUSG00000039478.16	Micu3	chr8	protein_coding	mitochondrial calcium uptake family, member 3
chr8	40927848	40963116	+	40927848	40936747	3pMXE	0.5	50	50	ENSMUST00000049389.11	ENSMUSG00000039470.16	Zdhhc2	chr8	protein_coding	zinc finger, DHHC domain containing 2
chr8	40900186	40907558	+	40900186	40907539	A3SS	0.5	50	50	ENSMUST00000049389.11	ENSMUSG00000039470.16	Zdhhc2	chr8	protein_coding	zinc finger, DHHC domain containing 2
chr8	40953544	40963116	+	40927848	40963116	A5SS	0.5	50	50	ENSMUST00000128166.8	ENSMUSG00000039470.16	Zdhhc2	chr8	protein_coding	zinc finger, DHHC domain containing 2
chr8	40947156	40952336	-	40947156;40948956	40948846;40952336	ES	0.5	50	50	ENSMUST00000034012.10	ENSMUSG00000031601.17	Cnot7	chr8	protein_coding	CCR4-NOT transcription complex, subunit 7
chr8	40963267	40965733	-	40963267	40964581	5pMXE	0.33	50	50	ENSMUST00000034012.10	ENSMUSG00000031601.17	Cnot7	chr8	protein_coding	CCR4-NOT transcription complex, subunit 7
chr8	40963267	40968745	-	40963267	40964581	5pMXE	0.33	50	50	ENSMUST00000034012.10	ENSMUSG00000031601.17	Cnot7	chr8	protein_coding	CCR4-NOT transcription complex, subunit 7
chr8	40963267;40965880	40965733;40968745	-	40963267	40968745	cassetteExon	0.5	100	100	ENSMUST00000132032.8	ENSMUSG00000031601.17	Cnot7	chr8	protein_coding	CCR4-NOT transcription complex, subunit 7
chr8	40947156	40952336	-	40948956	40952336	3pMXE	0.5	50	50	ENSMUST00000132740.2	ENSMUSG00000031601.17	Cnot7	chr8	protein_coding	CCR4-NOT transcription complex, subunit 7
chr8	40971979	40979968	+	40965274	40979968	A5SS	0.5	50	50	ENSMUST00000238390.2	ENSMUSG00000031600.12	Vps37a	chr8	protein_coding	vacuolar protein sorting 37A
chr8	41008957	41011197	-	41008957;41009573	41009486;41011197	ES	0.5	50	50	ENSMUST00000048890.17	ENSMUSG00000039431.17	Mtmr7	chr8	protein_coding	myotubularin related protein 7
chr8	41059964	41087741	-	41059964;41062059	41061937;41087741	ES	0.33	50	50	ENSMUST00000048890.17	ENSMUSG00000039431.17	Mtmr7	chr8	protein_coding	myotubularin related protein 7
chr8	41062059;41079180	41079062;41087741	-	41062059	41087741	cassetteExon	0.5	100	100	ENSMUST00000048890.17	ENSMUSG00000039431.17	Mtmr7	chr8	protein_coding	myotubularin related protein 7
chr8	41007438	41008817	-	41007642	41008817	A3SS	0.5	50	50	ENSMUST00000048890.17	ENSMUSG00000039431.17	Mtmr7	chr8	protein_coding	myotubularin related protein 7
chr8	41079180	41087741	-	41059964	41087741	A3SS	0.33	50	50	ENSMUST00000173957.2	ENSMUSG00000039431.17	Mtmr7	chr8	protein_coding	myotubularin related protein 7
chr8	41358764;41361571	41361435;41364032	+	41358764;41361232	41361093;41364032	MXE	0.5	100	100	ENSMUST00000098816.10	ENSMUSG00000031596.16	Slc7a2	chr8	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
chr8	41316087	41351974	+	41315594	41351974	A5SS	0.33	50	50	ENSMUST00000098816.10	ENSMUSG00000031596.16	Slc7a2	chr8	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
chr8	41328081	41351974	+	41315594	41351974	A5SS	0.33	50	50	ENSMUST00000098816.10	ENSMUSG00000031596.16	Slc7a2	chr8	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
chr8	41328081	41351974	+	41316087	41351974	A5SS	0.33	50	50	ENSMUST00000141505.2	ENSMUSG00000031596.16	Slc7a2	chr8	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
chr8	41455556;41461906	41461782;41468425	-	41455556	41468425	cassetteExon	0.5	100	100	ENSMUST00000059115.13	ENSMUSG00000045636.17	Mtus1	chr8	protein_coding	mitochondrial tumor suppressor 1
chr8	41503153;41509721	41509572;41529269	-	41503153	41529269	cassetteExon	0.5	100	100	ENSMUST00000059115.13	ENSMUSG00000045636.17	Mtus1	chr8	protein_coding	mitochondrial tumor suppressor 1
chr8	41467435	41468425	-	41455556	41468425	A3SS	0.33	50	50	ENSMUST00000059115.13	ENSMUSG00000045636.17	Mtus1	chr8	protein_coding	mitochondrial tumor suppressor 1
chr8	41472131	41475417	-	41468491	41475417	A3SS	0.33	50	50	ENSMUST00000059115.13	ENSMUSG00000045636.17	Mtus1	chr8	protein_coding	mitochondrial tumor suppressor 1
chr8	41472653	41475417	-	41468491	41475417	A3SS	0.33	50	50	ENSMUST00000059115.13	ENSMUSG00000045636.17	Mtus1	chr8	protein_coding	mitochondrial tumor suppressor 1
chr8	41468491	41469238	-	41468491	41475417	A5SS	0.25	50	50	ENSMUST00000059115.13	ENSMUSG00000045636.17	Mtus1	chr8	protein_coding	mitochondrial tumor suppressor 1
chr8	41468491	41469568	-	41468491	41475417	A5SS	0.25	50	50	ENSMUST00000059115.13	ENSMUSG00000045636.17	Mtus1	chr8	protein_coding	mitochondrial tumor suppressor 1
chr8	41468491	41469723	-	41468491	41475417	A5SS	0.25	50	50	ENSMUST00000059115.13	ENSMUSG00000045636.17	Mtus1	chr8	protein_coding	mitochondrial tumor suppressor 1
chr8	41475631	41492322	-	41475631	41501085	A5SS	0.33	50	50	ENSMUST00000059115.13	ENSMUSG00000045636.17	Mtus1	chr8	protein_coding	mitochondrial tumor suppressor 1
chr8	41475631	41494510	-	41475631	41501085	A5SS	0.33	50	50	ENSMUST00000059115.13	ENSMUSG00000045636.17	Mtus1	chr8	protein_coding	mitochondrial tumor suppressor 1
chr8	41503153	41507559	-	41503153	41529269	A5SS	0.33	50	50	ENSMUST00000059115.13	ENSMUSG00000045636.17	Mtus1	chr8	protein_coding	mitochondrial tumor suppressor 1
chr8	41537877	41567577	-	41537877	41586518	A5SS	0.33	50	50	ENSMUST00000059115.13	ENSMUSG00000045636.17	Mtus1	chr8	protein_coding	mitochondrial tumor suppressor 1
chr8	41537877	41586698	-	41537877	41586518	A5SS	0.33	50	50	ENSMUST00000059115.13	ENSMUSG00000045636.17	Mtus1	chr8	protein_coding	mitochondrial tumor suppressor 1
chr8	41503153	41509572	-	41503153	41507559	5pMXE	0.33	50	50	ENSMUST00000093534.11	ENSMUSG00000045636.17	Mtus1	chr8	protein_coding	mitochondrial tumor suppressor 1
chr8	41537877	41586698	-	41537877	41567577	5pMXE	0.33	50	50	ENSMUST00000118835.8	ENSMUSG00000045636.17	Mtus1	chr8	protein_coding	mitochondrial tumor suppressor 1
chr8	41475631	41492322	-	41475631	41494510	A5SS	0.33	50	50	ENSMUST00000051379.14	ENSMUSG00000045636.17	Mtus1	chr8	protein_coding	mitochondrial tumor suppressor 1
chr8	41467435	41468425	-	41461906	41468425	A3SS	0.33	50	50	ENSMUST00000155626.8	ENSMUSG00000045636.17	Mtus1	chr8	protein_coding	mitochondrial tumor suppressor 1
chr8	41468491	41469238	-	41468491	41469723	A5SS	0.25	50	50	ENSMUST00000155626.8	ENSMUSG00000045636.17	Mtus1	chr8	protein_coding	mitochondrial tumor suppressor 1
chr8	41468491	41469568	-	41468491	41469723	A5SS	0.25	50	50	ENSMUST00000155626.8	ENSMUSG00000045636.17	Mtus1	chr8	protein_coding	mitochondrial tumor suppressor 1
chr8	41468491	41469238	-	41468491	41469568	A5SS	0.25	50	50	ENSMUST00000117735.8	ENSMUSG00000045636.17	Mtus1	chr8	protein_coding	mitochondrial tumor suppressor 1
chr8	41472653	41475417	-	41472131	41475417	A3SS	0.33	50	50	ENSMUST00000142936.2	ENSMUSG00000045636.17	Mtus1	chr8	protein_coding	mitochondrial tumor suppressor 1
chr8	41714218	41720224	+	41714218;41714513	41714397;41720224	ES	0.5	50	50	ENSMUST00000211090.2	ENSMUSG00000031592.11	Pcm1	chr8	protein_coding	pericentriolar material 1
chr8	41711073	41712173	+	41711073	41712074	A3SS	0.5	50	50	ENSMUST00000211090.2	ENSMUSG00000031592.11	Pcm1	chr8	protein_coding	pericentriolar material 1
chr8	41795978	41796443	-	41795978	41796556	A5SS	0.5	50	50	ENSMUST00000034000.15	ENSMUSG00000031591.15	Asah1	chr8	protein_coding	N-acylsphingosine amidohydrolase 1
chr8	41807954	41827543	-	41807954	41813290	A5SS&ES	0.5	50	50	ENSMUST00000034000.15	ENSMUSG00000031591.15	Asah1	chr8	protein_coding	N-acylsphingosine amidohydrolase 1
chr8	41813336	41827543	-	41813336	41827547	A5SS	0.5	50	50	ENSMUST00000034000.15	ENSMUSG00000031591.15	Asah1	chr8	protein_coding	N-acylsphingosine amidohydrolase 1
chr8	41807954	41827543	-	41807954;41813336	41813290;41827543	ES	0.5	50	50	ENSMUST00000110417.8	ENSMUSG00000031591.15	Asah1	chr8	protein_coding	N-acylsphingosine amidohydrolase 1
chr8	41864385	41865326	-	41864385	41867840	A5SS	0.5	50	50	ENSMUST00000033999.8	ENSMUSG00000031590.9	Frg1	chr8	protein_coding	FSHD region gene 1
chr8	43583722	43589313	-	43583725	43589313	A3SS	0.33	50	50	ENSMUST00000059692.4	ENSMUSG00000031651.6	Triml1	chr8	protein_coding	tripartite motif family-like 1
chr8	43584610	43589313	-	43583725	43589313	A3SS	0.33	50	50	ENSMUST00000059692.4	ENSMUSG00000031651.6	Triml1	chr8	protein_coding	tripartite motif family-like 1
chr8	43583725	43584109	-	43583725	43589313	A5SS	0.5	50	50	ENSMUST00000059692.4	ENSMUSG00000031651.6	Triml1	chr8	protein_coding	tripartite motif family-like 1
chr8	43583725	43589313	-	43583725;43584610	43584109;43589313	ES	0.33	50	50	ENSMUST00000211446.2	ENSMUSG00000031651.6	Triml1	chr8	protein_coding	tripartite motif family-like 1
chr8	43583722	43589313	-	43584610	43589313	A3SS&ES	0.33	50	50	ENSMUST00000211446.2	ENSMUSG00000031651.6	Triml1	chr8	protein_coding	tripartite motif family-like 1
chr8	43638495	43643106	+	43638495;43640748	43640608;43643106	ES	0.5	50	50	ENSMUST00000209200.2	ENSMUSG00000091490.4	Triml2	chr8	protein_coding	tripartite motif family-like 2
chr8	43633649;43635394	43635379;43636159	+	43633649	43636159	cassetteExon	0.5	100	100	ENSMUST00000209200.2	ENSMUSG00000091490.4	Triml2	chr8	protein_coding	tripartite motif family-like 2
chr8	43753742	43757513	-	43753742;43756016	43755912;43757513	ES	0.5	50	50	ENSMUST00000211248.2	ENSMUSG00000051176.7	Zfp42	chr8	protein_coding	zinc finger protein 42
chr8	43757594	43759878	-	43757596	43759878	A3SS	0.5	50	50	ENSMUST00000211248.2	ENSMUSG00000051176.7	Zfp42	chr8	protein_coding	zinc finger protein 42
chr8	44105763	44152482	-	44105763;44145940	44145849;44152482	ES	0.5	50	50	ENSMUST00000110411.4	ENSMUSG00000079058.4	Adam34	chr8	protein_coding	a disintegrin and metallopeptidase domain 34
chr8	45463648;45465124	45465056;45466001	+	45463648	45466001	cassetteExon	0.5	100	100	ENSMUST00000191428.7	ENSMUSG00000070047.15	Fat1	chr8	protein_coding	FAT atypical cadherin 1
chr8	45498205;45502914	45502879;45503818	+	45498205	45503818	cassetteExon	0.5	100	100	ENSMUST00000191428.7	ENSMUSG00000070047.15	Fat1	chr8	protein_coding	FAT atypical cadherin 1
chr8	45498205	45498770	+	45498205	45503818	A3SS	0.25	50	50	ENSMUST00000191428.7	ENSMUSG00000070047.15	Fat1	chr8	protein_coding	FAT atypical cadherin 1
chr8	45498205	45500687	+	45498205	45503818	A3SS	0.25	50	50	ENSMUST00000191428.7	ENSMUSG00000070047.15	Fat1	chr8	protein_coding	FAT atypical cadherin 1
chr8	45498205;45500746	45500687;45502879	+	45498205	45502879	cassetteExon	0.5	100	100	ENSMUST00000189017.8	ENSMUSG00000070047.15	Fat1	chr8	protein_coding	FAT atypical cadherin 1
chr8	45498205	45498770	+	45498205	45502879	A3SS	0.25	50	50	ENSMUST00000189017.8	ENSMUSG00000070047.15	Fat1	chr8	protein_coding	FAT atypical cadherin 1
chr8	45498205;45498822	45498770;45500687	+	45498205	45500687	cassetteExon	0.5	100	100	ENSMUST00000215588.2	ENSMUSG00000070047.15	Fat1	chr8	protein_coding	FAT atypical cadherin 1
chr8	45498205	45503818	+	45498205	45502879	3pMXE	0.25	50	50	ENSMUST00000189367.2	ENSMUSG00000070047.15	Fat1	chr8	protein_coding	FAT atypical cadherin 1
chr8	45522439;45538678	45538591;45540234	+	45522439	45540234	cassetteExon	0.5	100	100	ENSMUST00000067984.9	ENSMUSG00000054764.10	Mtnr1a	chr8	protein_coding	melatonin receptor 1A
chr8	45522439	45540234	+	45538678	45540234	5pMXE	0.5	50	50	ENSMUST00000209488.2	ENSMUSG00000054764.10	Mtnr1a	chr8	protein_coding	melatonin receptor 1A
chr8	45576336	45577022	+	45563613	45577022	A5SS	0.5	50	50	ENSMUST00000209448.2	ENSMUSG00000110260.2	Gm30504	chr8	lncRNA	predicted gene, 30504
chr8	45642309	45648914	+	45589538	45648914	A5SS	0.5	50	50	ENSMUST00000209316.2	ENSMUSG00000110260.2	Gm30504	chr8	lncRNA	predicted gene, 30504
chr8	45708403	45714979	-	45708403;45714118	45714063;45714979	ES	0.5	50	50	ENSMUST00000034064.5	ENSMUSG00000031645.5	F11	chr8	protein_coding	coagulation factor XI
chr8	45808766	45834190	-	45808766	45811435	5pMXE	0.5	50	50	ENSMUST00000135912.8	ENSMUSG00000070044.16	Fam149a	chr8	protein_coding	family with sequence similarity 149, member A
chr8	45794321	45795428	-	45794321	45795419	A5SS	0.5	50	50	ENSMUST00000135912.8	ENSMUSG00000070044.16	Fam149a	chr8	protein_coding	family with sequence similarity 149, member A
chr8	45861772	45863490	-	45861772;45863027	45862833;45863490	ES	0.25	50	50	ENSMUST00000034056.12	ENSMUSG00000031639.13	Tlr3	chr8	protein_coding	toll-like receptor 3
chr8	45861772;45863336	45863157;45863490	-	45861772;45863027	45862833;45863490	MXE	0.5	100	100	ENSMUST00000034056.12	ENSMUSG00000031639.13	Tlr3	chr8	protein_coding	toll-like receptor 3
chr8	45863015	45863490	-	45863027	45863490	A3SS	0.25	50	50	ENSMUST00000034056.12	ENSMUSG00000031639.13	Tlr3	chr8	protein_coding	toll-like receptor 3
chr8	45861772;45863015	45862833;45863490	-	45861772	45863490	cassetteExon	0.5	100	100	ENSMUST00000167106.3	ENSMUSG00000031639.13	Tlr3	chr8	protein_coding	toll-like receptor 3
chr8	45861772;45863336	45863157;45863490	-	45861772	45863490	cassetteExon	0.5	100	100	ENSMUST00000167106.3	ENSMUSG00000031639.13	Tlr3	chr8	protein_coding	toll-like receptor 3
chr8	45863015	45863490	-	45863015	45863337	5pMXE	0.33	50	50	ENSMUST00000209772.2	ENSMUSG00000031639.13	Tlr3	chr8	protein_coding	toll-like receptor 3
chr8	45861772	45863157	-	45861772	45862833	A5SS&ES	0.5	50	50	ENSMUST00000209772.2	ENSMUSG00000031639.13	Tlr3	chr8	protein_coding	toll-like receptor 3
chr8	45863015	45863157	-	45863015	45863337	A5SS	0.33	50	50	ENSMUST00000209772.2	ENSMUSG00000031639.13	Tlr3	chr8	protein_coding	toll-like receptor 3
chr8	45861772;45863336	45863157;45863490	-	45861772;45863015	45862833;45863490	MXE	0.5	100	100	ENSMUST00000211370.2	ENSMUSG00000031639.13	Tlr3	chr8	protein_coding	toll-like receptor 3
chr8	45863015;45863336	45863157;45863490	-	45863015	45863490	cassetteExon	0.5	100	100	ENSMUST00000211370.2	ENSMUSG00000031639.13	Tlr3	chr8	protein_coding	toll-like receptor 3
chr8	45861772	45863490	-	45861772	45863157	5pMXE	0.33	50	50	ENSMUST00000210996.2	ENSMUSG00000031639.13	Tlr3	chr8	protein_coding	toll-like receptor 3
chr8	45861772;45863015	45862833;45863157	-	45861772	45863157	cassetteExon	0.5	100	100	ENSMUST00000210996.2	ENSMUSG00000031639.13	Tlr3	chr8	protein_coding	toll-like receptor 3
chr8	45861772	45863490	-	45863027	45863490	3pMXE	0.25	50	50	ENSMUST00000209269.2	ENSMUSG00000031639.13	Tlr3	chr8	protein_coding	toll-like receptor 3
chr8	45863336	45863490	-	45863027	45863490	A3SS	0.25	50	50	ENSMUST00000209269.2	ENSMUSG00000031639.13	Tlr3	chr8	protein_coding	toll-like receptor 3
chr8	45861772	45863157	-	45863015	45863157	3pMXE	0.5	50	50	ENSMUST00000210354.2	ENSMUSG00000031639.13	Tlr3	chr8	protein_coding	toll-like receptor 3
chr8	45863015	45863490	-	45863015	45863157	5pMXE	0.33	50	50	ENSMUST00000210354.2	ENSMUSG00000031639.13	Tlr3	chr8	protein_coding	toll-like receptor 3
chr8	46189239	46198457	+	46189239;46194616	46194524;46198457	ES	0.5	50	50	ENSMUST00000067065.14	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46222932	46225571	+	46222932;46223627	46223583;46225571	ES	0.5	50	50	ENSMUST00000067065.14	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46235997	46238306	+	46235997;46236663	46236580;46238306	ES	0.33	50	50	ENSMUST00000067065.14	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46236663	46243013	+	46236663;46238362	46238306;46243013	ES	0.25	50	50	ENSMUST00000067065.14	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46246005	46252747	+	46246005;46249595	46248015;46252747	ES	0.5	50	50	ENSMUST00000067065.14	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	45960994;46098889	46098798;46111840	+	45960994	46111840	cassetteExon	0.5	100	100	ENSMUST00000067065.14	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46111978;46147650	46147595;46189190	+	46111978	46189190	cassetteExon	0.5	100	100	ENSMUST00000067065.14	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46198483	46198823	+	46198483	46198754	A3SS	0.5	50	50	ENSMUST00000067065.14	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46198878	46199592	+	46198878	46212090	A3SS	0.5	50	50	ENSMUST00000067065.14	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46228740	46229440	+	46228740	46235839	A3SS	0.25	50	50	ENSMUST00000067065.14	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46258890	46260025	+	46258890	46272756	A3SS	0.33	50	50	ENSMUST00000067065.14	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46258890	46262446	+	46258890	46272756	A3SS	0.33	50	50	ENSMUST00000067065.14	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46272805	46273616	+	46272805	46276766	A3SS	0.33	50	50	ENSMUST00000067065.14	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46272805	46276796	+	46272805	46276766	A3SS	0.33	50	50	ENSMUST00000067065.14	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46081309	46111840	+	45960994	46111840	A5SS	0.25	50	50	ENSMUST00000067065.14	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46111508	46111840	+	45960994	46111840	A5SS	0.25	50	50	ENSMUST00000067065.14	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46115118	46189190	+	46111978	46189190	A5SS	0.25	50	50	ENSMUST00000067065.14	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46141484	46189190	+	46111978	46189190	A5SS	0.25	50	50	ENSMUST00000067065.14	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46217054	46222866	+	46216228	46222866	A5SS	0.5	50	50	ENSMUST00000067065.14	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46252838	46254002	+	46252835	46254002	A5SS	0.5	50	50	ENSMUST00000067065.14	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46263228	46272756	+	46258890	46272756	A5SS	0.5	50	50	ENSMUST00000067065.14	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46246005	46252747	+	46246005	46248015	3pMXE	0.5	50	50	ENSMUST00000138049.9	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46228740;46235997	46235839;46243013	+	46228740	46243013	cassetteExon	0.5	100	100	ENSMUST00000138049.9	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46228740;46238362	46238306;46243013	+	46228740	46243013	cassetteExon	0.5	100	100	ENSMUST00000138049.9	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46228740	46229440	+	46228740	46243013	A3SS	0.25	50	50	ENSMUST00000138049.9	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46236663	46243013	+	46228740	46243013	A5SS	0.25	50	50	ENSMUST00000138049.9	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46228740	46238306	+	46228740;46235997	46235839;46238306	ES	0.33	50	50	ENSMUST00000132139.9	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46235997	46243013	+	46235997;46238362	46238306;46243013	ES	0.25	50	50	ENSMUST00000132139.9	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46235997;46236663	46236580;46243013	+	46235997;46238362	46238306;46243013	MXE	0.5	100	100	ENSMUST00000132139.9	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46098889	46101233	+	46098889	46111840	A3SS	0.5	50	50	ENSMUST00000132139.9	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46272805	46273616	+	46272805	46276796	A3SS	0.33	50	50	ENSMUST00000132139.9	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46081309	46098798	+	45960994	46098798	A5SS	0.5	50	50	ENSMUST00000132139.9	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46081309	46111840	+	46098889	46111840	A5SS&ES	0.25	50	50	ENSMUST00000132139.9	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46111508	46111840	+	46098889	46111840	A5SS	0.25	50	50	ENSMUST00000132139.9	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46249595	46252747	+	46246005	46252747	A5SS	0.5	50	50	ENSMUST00000132139.9	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46228740	46238306	+	46228740	46229440	3pMXE	0.25	50	50	ENSMUST00000141039.8	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46228740;46235997	46235839;46243013	+	46228740;46238362	46238306;46243013	MXE	0.5	100	100	ENSMUST00000171337.10	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46236663	46238306	+	46228740	46238306	A5SS	0.33	50	50	ENSMUST00000171337.10	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46236663	46243013	+	46238362	46243013	A5SS&ES	0.25	50	50	ENSMUST00000171337.10	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46081309	46111840	+	46081309;46098889	46098798;46111840	ES	0.33	50	50	ENSMUST00000145458.9	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46111508	46111840	+	46081309	46111840	A5SS	0.25	50	50	ENSMUST00000134321.8	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46189239	46212090	+	46189239	46198457	3pMXE	0.33	50	50	ENSMUST00000133864.2	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46189239;46198878	46198457;46212090	+	46189239	46212090	cassetteExon	0.5	100	100	ENSMUST00000211095.2	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46189239	46194524	+	46189239	46212090	A3SS	0.33	50	50	ENSMUST00000211095.2	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46115118	46189190	+	46147650	46189190	A5SS&ES	0.25	50	50	ENSMUST00000143820.8	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46141484	46189190	+	46147650	46189190	A5SS&ES	0.25	50	50	ENSMUST00000143820.8	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46141484	46189190	+	46115118	46189190	A5SS	0.25	50	50	ENSMUST00000149752.8	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46235997;46236663	46236580;46243013	+	46235997	46243013	cassetteExon	0.5	100	100	ENSMUST00000130011.8	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46222932	46225571	+	46223627	46225571	5pMXE	0.5	50	50	ENSMUST00000155858.8	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46228740;46238362	46238306;46243013	+	46228740;46236663	46235839;46243013	MXE	0.5	100	100	ENSMUST00000155858.8	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46258890	46272756	+	46258890;46263228	46262446;46272756	ES	0.5	50	50	ENSMUST00000238803.2	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46258890	46260025	+	46258890	46262446	A3SS	0.33	50	50	ENSMUST00000238803.2	ENSMUSG00000031626.19	Sorbs2	chr8	protein_coding	sorbin and SH3 domain containing 2
chr8	46049453	46049726	-	46049453	46058069	A5SS	0.5	50	50	ENSMUST00000209660.2	ENSMUSG00000084954.3	Gm16351	chr8	lncRNA	predicted gene 16351
chr8	46353596	46362056	+	46353596	46361506	A3SS&ES	0.5	50	50	ENSMUST00000034053.7	ENSMUSG00000031636.8	Pdlim3	chr8	protein_coding	PDZ and LIM domain 3
chr8	46366997	46368166	+	46361693	46368166	A5SS	0.5	50	50	ENSMUST00000034053.7	ENSMUSG00000031636.8	Pdlim3	chr8	protein_coding	PDZ and LIM domain 3
chr8	46353596;46361693	46361506;46368166	+	46353596;46366997	46362056;46368166	MXE	0.5	100	100	ENSMUST00000210422.2	ENSMUSG00000031636.8	Pdlim3	chr8	protein_coding	PDZ and LIM domain 3
chr8	46388201	46392330	+	46388201;46392007	46391952;46392330	ES	0.5	50	50	ENSMUST00000095326.10	ENSMUSG00000071104.11	Ccdc110	chr8	protein_coding	coiled-coil domain containing 110
chr8	46421201;46421979	46421902;46423391	-	46421201	46423391	cassetteExon	0.5	100	100	ENSMUST00000095323.8	ENSMUSG00000071103.11	1700029J07Rik	chr8	protein_coding	RIKEN cDNA 1700029J07 gene
chr8	46433676	46437078	+	46433676;46436717	46436560;46437078	ES	0.33	50	50	ENSMUST00000034051.7	ENSMUSG00000031634.14	Ufsp2	chr8	protein_coding	UFM1-specific peptidase 2
chr8	46428835	46432246	+	46428625	46432246	A5SS	0.5	50	50	ENSMUST00000034051.7	ENSMUSG00000031634.14	Ufsp2	chr8	protein_coding	UFM1-specific peptidase 2
chr8	46433504	46433610	+	46433529	46433610	A5SS	0.5	50	50	ENSMUST00000034051.7	ENSMUSG00000031634.14	Ufsp2	chr8	protein_coding	UFM1-specific peptidase 2
chr8	46433529	46437078	+	46436717	46437078	A5SS&ES	0.33	50	50	ENSMUST00000210081.2	ENSMUSG00000031634.14	Ufsp2	chr8	protein_coding	UFM1-specific peptidase 2
chr8	46433529	46437078	+	46433529	46433610	3pMXE	0.5	50	50	ENSMUST00000123041.8	ENSMUSG00000031634.14	Ufsp2	chr8	protein_coding	UFM1-specific peptidase 2
chr8	46433529	46437078	+	46433529;46433676	46433610;46437078	ES	0.33	50	50	ENSMUST00000123307.8	ENSMUSG00000031634.14	Ufsp2	chr8	protein_coding	UFM1-specific peptidase 2
chr8	46452440	46454291	-	46452440	46452654	5pMXE	0.33	50	50	ENSMUST00000053558.10	ENSMUSG00000050914.17	Ankrd37	chr8	protein_coding	ankyrin repeat domain 37
chr8	46452440	46452688	-	46452440	46452654	A5SS	0.33	50	50	ENSMUST00000053558.10	ENSMUSG00000050914.17	Ankrd37	chr8	protein_coding	ankyrin repeat domain 37
chr8	46452440	46454291	-	46452440	46452688	5pMXE	0.33	50	50	ENSMUST00000153674.8	ENSMUSG00000050914.17	Ankrd37	chr8	protein_coding	ankyrin repeat domain 37
chr8	46473784;46475269	46475049;46475900	+	46473784	46475900	cassetteExon	0.5	100	100	ENSMUST00000110380.8	ENSMUSG00000031637.14	Lrp2bp	chr8	protein_coding	Lrp2 binding protein
chr8	46466219	46473464	+	46466219	46473457	A3SS	0.5	50	50	ENSMUST00000110380.8	ENSMUSG00000031637.14	Lrp2bp	chr8	protein_coding	Lrp2 binding protein
chr8	46452738	46464151	+	46452542	46464151	A5SS	0.33	50	50	ENSMUST00000110380.8	ENSMUSG00000031637.14	Lrp2bp	chr8	protein_coding	Lrp2 binding protein
chr8	46463837	46464151	+	46452542	46464151	A5SS	0.33	50	50	ENSMUST00000110380.8	ENSMUSG00000031637.14	Lrp2bp	chr8	protein_coding	Lrp2 binding protein
chr8	46475617	46475900	+	46473784	46475900	A5SS	0.33	50	50	ENSMUST00000110380.8	ENSMUSG00000031637.14	Lrp2bp	chr8	protein_coding	Lrp2 binding protein
chr8	46463837	46464151	+	46452738	46464151	A5SS	0.33	50	50	ENSMUST00000066451.10	ENSMUSG00000031637.14	Lrp2bp	chr8	protein_coding	Lrp2 binding protein
chr8	46475617	46475900	+	46475269	46475900	A5SS	0.33	50	50	ENSMUST00000145597.8	ENSMUSG00000031637.14	Lrp2bp	chr8	protein_coding	Lrp2 binding protein
chr8	46521219	46558156	-	46556738	46558156	A3SS&ES	0.5	50	50	ENSMUST00000170416.8	ENSMUSG00000038291.17	Snx25	chr8	protein_coding	sorting nexin 25
chr8	46509160	46509381	-	46509160	46511504	A5SS	0.5	50	50	ENSMUST00000170416.8	ENSMUSG00000038291.17	Snx25	chr8	protein_coding	sorting nexin 25
chr8	46533329	46542673	-	46533329	46556552	A5SS	0.5	50	50	ENSMUST00000170416.8	ENSMUSG00000038291.17	Snx25	chr8	protein_coding	sorting nexin 25
chr8	46577183	46604599	-	46577183	46604819	A5SS	0.5	50	50	ENSMUST00000110378.9	ENSMUSG00000038291.17	Snx25	chr8	protein_coding	sorting nexin 25
chr8	46521274	46533259	-	46486859	46533259	A3SS	0.5	50	50	ENSMUST00000177186.2	ENSMUSG00000038291.17	Snx25	chr8	protein_coding	sorting nexin 25
chr8	46486859	46487439	-	46486859	46533259	A5SS	0.5	50	50	ENSMUST00000177186.2	ENSMUSG00000038291.17	Snx25	chr8	protein_coding	sorting nexin 25
chr8	46616786	46622596	+	46604950	46622596	A5SS	0.25	50	50	ENSMUST00000154040.2	ENSMUSG00000031631.16	Cfap97	chr8	protein_coding	cilia and flagella associated protein 97
chr8	46616900	46622596	+	46604950	46622596	A5SS	0.25	50	50	ENSMUST00000154040.2	ENSMUSG00000031631.16	Cfap97	chr8	protein_coding	cilia and flagella associated protein 97
chr8	46617933	46622596	+	46604950	46622596	A5SS	0.25	50	50	ENSMUST00000154040.2	ENSMUSG00000031631.16	Cfap97	chr8	protein_coding	cilia and flagella associated protein 97
chr8	46616786;46617933	46617799;46622596	+	46616786	46622596	cassetteExon	0.5	100	100	ENSMUST00000034048.13	ENSMUSG00000031631.16	Cfap97	chr8	protein_coding	cilia and flagella associated protein 97
chr8	46616900	46622596	+	46616786	46622596	A5SS	0.25	50	50	ENSMUST00000034048.13	ENSMUSG00000031631.16	Cfap97	chr8	protein_coding	cilia and flagella associated protein 97
chr8	46616900	46617799	+	46616786	46617799	A5SS	0.5	50	50	ENSMUST00000145080.8	ENSMUSG00000031631.16	Cfap97	chr8	protein_coding	cilia and flagella associated protein 97
chr8	46616900	46622596	+	46617933	46622596	A5SS&ES	0.33	50	50	ENSMUST00000145080.8	ENSMUSG00000031631.16	Cfap97	chr8	protein_coding	cilia and flagella associated protein 97
chr8	46616900	46622596	+	46616900;46617933	46617799;46622596	ES	0.33	50	50	ENSMUST00000145229.2	ENSMUSG00000031631.16	Cfap97	chr8	protein_coding	cilia and flagella associated protein 97
chr8	46616786	46622596	+	46617933	46622596	A5SS&ES	0.33	50	50	ENSMUST00000145229.2	ENSMUSG00000031631.16	Cfap97	chr8	protein_coding	cilia and flagella associated protein 97
chr8	46924267	46958686	+	46924267;46946063	46945837;46958686	ES	0.5	50	50	ENSMUST00000034046.13	ENSMUSG00000018796.14	Acsl1	chr8	protein_coding	acyl-CoA synthetase long-chain family member 1
chr8	46924267;46925086	46924910;46945837	+	46924267	46945837	cassetteExon	0.5	100	100	ENSMUST00000034046.13	ENSMUSG00000018796.14	Acsl1	chr8	protein_coding	acyl-CoA synthetase long-chain family member 1
chr8	46972071;46974524	46974447;46977980	+	46972071;46974382	46974305;46977980	MXE	0.5	100	100	ENSMUST00000034046.13	ENSMUSG00000018796.14	Acsl1	chr8	protein_coding	acyl-CoA synthetase long-chain family member 1
chr8	46984968	46986419	+	46984968	46986403	A3SS	0.5	50	50	ENSMUST00000034046.13	ENSMUSG00000018796.14	Acsl1	chr8	protein_coding	acyl-CoA synthetase long-chain family member 1
chr8	46944087	46945837	+	46924267	46945837	A5SS	0.25	50	50	ENSMUST00000034046.13	ENSMUSG00000018796.14	Acsl1	chr8	protein_coding	acyl-CoA synthetase long-chain family member 1
chr8	46944198	46945837	+	46924267	46945837	A5SS	0.25	50	50	ENSMUST00000034046.13	ENSMUSG00000018796.14	Acsl1	chr8	protein_coding	acyl-CoA synthetase long-chain family member 1
chr8	46958768	46961370	+	46958803	46961370	A5SS	0.5	50	50	ENSMUST00000034046.13	ENSMUSG00000018796.14	Acsl1	chr8	protein_coding	acyl-CoA synthetase long-chain family member 1
chr8	46924267	46924910	+	46924267	46958686	A3SS	0.33	50	50	ENSMUST00000211644.2	ENSMUSG00000018796.14	Acsl1	chr8	protein_coding	acyl-CoA synthetase long-chain family member 1
chr8	46944087	46945837	+	46925086	46945837	A5SS	0.25	50	50	ENSMUST00000135955.8	ENSMUSG00000018796.14	Acsl1	chr8	protein_coding	acyl-CoA synthetase long-chain family member 1
chr8	46944198	46945837	+	46925086	46945837	A5SS	0.25	50	50	ENSMUST00000135955.8	ENSMUSG00000018796.14	Acsl1	chr8	protein_coding	acyl-CoA synthetase long-chain family member 1
chr8	46924267	46958686	+	46924267	46945837	A3SS&ES	0.33	50	50	ENSMUST00000210929.2	ENSMUSG00000018796.14	Acsl1	chr8	protein_coding	acyl-CoA synthetase long-chain family member 1
chr8	46944087	46945837	+	46944198	46945837	A5SS	0.25	50	50	ENSMUST00000110372.9	ENSMUSG00000018796.14	Acsl1	chr8	protein_coding	acyl-CoA synthetase long-chain family member 1
chr8	46924267	46958686	+	46946063	46958686	5pMXE	0.5	50	50	ENSMUST00000110371.8	ENSMUSG00000018796.14	Acsl1	chr8	protein_coding	acyl-CoA synthetase long-chain family member 1
chr8	47021714	47025787	+	47021714;47023114	47023006;47025787	ES	0.5	50	50	ENSMUST00000034045.15	ENSMUSG00000031629.15	Cenpu	chr8	protein_coding	centromere protein U
chr8	47007098;47008595	47008490;47009117	+	47007098	47009117	cassetteExon	0.5	100	100	ENSMUST00000034045.15	ENSMUSG00000031629.15	Cenpu	chr8	protein_coding	centromere protein U
chr8	47013366	47014813	+	47013006	47014813	A5SS	0.5	50	50	ENSMUST00000034045.15	ENSMUSG00000031629.15	Cenpu	chr8	protein_coding	centromere protein U
chr8	47014858	47015453	+	47014873	47015453	A5SS	0.5	50	50	ENSMUST00000034045.15	ENSMUSG00000031629.15	Cenpu	chr8	protein_coding	centromere protein U
chr8	47013006	47014813	+	47013006	47021645	A3SS	0.5	50	50	ENSMUST00000210368.2	ENSMUSG00000031629.15	Cenpu	chr8	protein_coding	centromere protein U
chr8	47015680	47021645	+	47013006	47021645	A5SS	0.5	50	50	ENSMUST00000210368.2	ENSMUSG00000031629.15	Cenpu	chr8	protein_coding	centromere protein U
chr8	47005162	47007050	+	47005162	47012904	A3SS	0.5	50	50	ENSMUST00000093518.5	ENSMUSG00000031629.15	Cenpu	chr8	protein_coding	centromere protein U
chr8	47009228	47012904	+	47005162	47012904	A5SS	0.5	50	50	ENSMUST00000093518.5	ENSMUSG00000031629.15	Cenpu	chr8	protein_coding	centromere protein U
chr8	47039731;47040832	47040714;47043250	-	47039731	47043250	cassetteExon	0.5	100	100	ENSMUST00000211400.2	ENSMUSG00000038225.16	Primpol	chr8	protein_coding	primase and polymerase (DNA-directed)
chr8	47065481	47065996	-	47065481	47070169	A5SS	0.33	50	50	ENSMUST00000211400.2	ENSMUSG00000038225.16	Primpol	chr8	protein_coding	primase and polymerase (DNA-directed)
chr8	47065481	47070047	-	47065481	47070169	A5SS	0.33	50	50	ENSMUST00000211400.2	ENSMUSG00000038225.16	Primpol	chr8	protein_coding	primase and polymerase (DNA-directed)
chr8	47065481	47070047	-	47065481	47065996	5pMXE	0.33	50	50	ENSMUST00000125319.2	ENSMUSG00000038225.16	Primpol	chr8	protein_coding	primase and polymerase (DNA-directed)
chr8	47070531	47082769	+	47070536	47082769	A5SS	0.5	50	50	ENSMUST00000211115.2	ENSMUSG00000031628.10	Casp3	chr8	protein_coding	caspase 3
chr8	47184897	47189307	-	47131896	47189307	A3SS	0.5	50	50	ENSMUST00000208508.3	ENSMUSG00000097534.4	Gm16675	chr8	lncRNA	predicted gene, 16675
chr8	47192971	47259506	+	47192971;47246620	47246528;47259506	ES	0.5	50	50	ENSMUST00000034041.9	ENSMUSG00000031627.10	Irf2	chr8	protein_coding	interferon regulatory factor 2
chr8	47260786	47290709	+	47260786;47271943	47271826;47290709	ES	0.5	50	50	ENSMUST00000034041.9	ENSMUSG00000031627.10	Irf2	chr8	protein_coding	interferon regulatory factor 2
chr8	47246620	47300046	+	47246620	47259506	A3SS&ES	0.5	50	50	ENSMUST00000034041.9	ENSMUSG00000031627.10	Irf2	chr8	protein_coding	interferon regulatory factor 2
chr8	47192831	47246528	+	47192971	47246528	A5SS	0.25	50	50	ENSMUST00000034041.9	ENSMUSG00000031627.10	Irf2	chr8	protein_coding	interferon regulatory factor 2
chr8	47193266	47246528	+	47192971	47246528	A5SS	0.25	50	50	ENSMUST00000034041.9	ENSMUSG00000031627.10	Irf2	chr8	protein_coding	interferon regulatory factor 2
chr8	47193380	47246528	+	47192971	47246528	A5SS	0.25	50	50	ENSMUST00000034041.9	ENSMUSG00000031627.10	Irf2	chr8	protein_coding	interferon regulatory factor 2
chr8	47192971	47259506	+	47246620	47259506	A5SS&ES	0.5	50	50	ENSMUST00000208507.2	ENSMUSG00000031627.10	Irf2	chr8	protein_coding	interferon regulatory factor 2
chr8	47193266	47246528	+	47192831	47246528	A5SS	0.25	50	50	ENSMUST00000208507.2	ENSMUSG00000031627.10	Irf2	chr8	protein_coding	interferon regulatory factor 2
chr8	47193380	47246528	+	47192831	47246528	A5SS	0.25	50	50	ENSMUST00000208507.2	ENSMUSG00000031627.10	Irf2	chr8	protein_coding	interferon regulatory factor 2
chr8	47193380	47246528	+	47193266	47246528	A5SS	0.25	50	50	ENSMUST00000208433.2	ENSMUSG00000031627.10	Irf2	chr8	protein_coding	interferon regulatory factor 2
chr8	47260786	47290709	+	47260786	47271826	3pMXE	0.5	50	50	ENSMUST00000210334.2	ENSMUSG00000031627.10	Irf2	chr8	protein_coding	interferon regulatory factor 2
chr8	47535573	47535899	+	47535573	47546029	A3SS	0.5	50	50	ENSMUST00000039840.15	ENSMUSG00000038173.16	Enpp6	chr8	protein_coding	ectonucleotide pyrophosphatase/phosphodiesterase 6
chr8	47656308	47805066	-	47656308	47740915	5pMXE	0.2	50	50	ENSMUST00000079195.6	ENSMUSG00000038143.17	Stox2	chr8	protein_coding	storkhead box 2
chr8	47656308	47865983	-	47656308	47740915	5pMXE	0.2	50	50	ENSMUST00000079195.6	ENSMUSG00000038143.17	Stox2	chr8	protein_coding	storkhead box 2
chr8	47639607;47644721	47644668;47644874	-	47639607	47644874	cassetteExon	0.5	100	100	ENSMUST00000079195.6	ENSMUSG00000038143.17	Stox2	chr8	protein_coding	storkhead box 2
chr8	47647139;47651363	47651262;47656156	-	47647139	47656156	cassetteExon	0.5	100	100	ENSMUST00000079195.6	ENSMUSG00000038143.17	Stox2	chr8	protein_coding	storkhead box 2
chr8	47656308	47673140	-	47656308	47740915	A5SS	0.2	50	50	ENSMUST00000079195.6	ENSMUSG00000038143.17	Stox2	chr8	protein_coding	storkhead box 2
chr8	47656308	47695369	-	47656308	47740915	A5SS	0.2	50	50	ENSMUST00000079195.6	ENSMUSG00000038143.17	Stox2	chr8	protein_coding	storkhead box 2
chr8	47866423	47867018	-	47866423	47866616	5pMXE	0.5	50	50	ENSMUST00000211882.2	ENSMUSG00000038143.17	Stox2	chr8	protein_coding	storkhead box 2
chr8	47748379	47865983	-	47656308	47865983	A3SS	0.5	50	50	ENSMUST00000211882.2	ENSMUSG00000038143.17	Stox2	chr8	protein_coding	storkhead box 2
chr8	47656308	47673140	-	47656308	47865983	A5SS	0.2	50	50	ENSMUST00000211882.2	ENSMUSG00000038143.17	Stox2	chr8	protein_coding	storkhead box 2
chr8	47656308	47695369	-	47656308	47865983	A5SS	0.2	50	50	ENSMUST00000211882.2	ENSMUSG00000038143.17	Stox2	chr8	protein_coding	storkhead box 2
chr8	47656308	47805066	-	47656308	47865983	A5SS	0.2	50	50	ENSMUST00000211882.2	ENSMUSG00000038143.17	Stox2	chr8	protein_coding	storkhead box 2
chr8	47656308	47673140	-	47656308	47805066	A5SS	0.2	50	50	ENSMUST00000110367.10	ENSMUSG00000038143.17	Stox2	chr8	protein_coding	storkhead box 2
chr8	47656308	47695369	-	47656308	47805066	A5SS	0.2	50	50	ENSMUST00000110367.10	ENSMUSG00000038143.17	Stox2	chr8	protein_coding	storkhead box 2
chr8	47639607	47644874	-	47644721	47644874	3pMXE	0.5	50	50	ENSMUST00000210030.2	ENSMUSG00000038143.17	Stox2	chr8	protein_coding	storkhead box 2
chr8	47656308	47695369	-	47656308	47673140	5pMXE	0.2	50	50	ENSMUST00000210030.2	ENSMUSG00000038143.17	Stox2	chr8	protein_coding	storkhead box 2
chr8	47990394	47995727	+	47990394	47995731	A3SS	0.5	50	50	ENSMUST00000175692.8	ENSMUSG00000031568.17	Rwdd4a	chr8	protein_coding	RWD domain containing 4A
chr8	48122371	48127541	-	48122371	48126564	5pMXE	0.33	50	50	ENSMUST00000146625.3	ENSMUSG00000063049.5	Ing2	chr8	protein_coding	inhibitor of growth family, member 2
chr8	48122371	48128546	-	48122371	48126564	5pMXE	0.33	50	50	ENSMUST00000146625.3	ENSMUSG00000063049.5	Ing2	chr8	protein_coding	inhibitor of growth family, member 2
chr8	48122371	48128546	-	48122371	48127541	5pMXE	0.33	50	50	ENSMUST00000080353.3	ENSMUSG00000063049.5	Ing2	chr8	protein_coding	inhibitor of growth family, member 2
chr8	48165329	48165923	-	48165329	48165954	A5SS	0.5	50	50	ENSMUST00000038738.7	ENSMUSG00000038069.7	Cdkn2aip	chr8	protein_coding	CDKN2A interacting protein
chr8	48200400	48201315	-	48198152	48201315	A3SS	0.5	50	50	ENSMUST00000212305.2	ENSMUSG00000110665.2	Gm31786	chr8	lncRNA	predicted gene, 31786
chr8	48590409	48591214	+	48590409	48591817	A3SS	0.5	50	50	ENSMUST00000174278.8	ENSMUSG00000031562.16	Dctd	chr8	protein_coding	dCMP deaminase
chr8	48563283	48564694	+	48552176	48564694	A5SS	0.25	50	50	ENSMUST00000174278.8	ENSMUSG00000031562.16	Dctd	chr8	protein_coding	dCMP deaminase
chr8	48563316	48564694	+	48552176	48564694	A5SS	0.25	50	50	ENSMUST00000174278.8	ENSMUSG00000031562.16	Dctd	chr8	protein_coding	dCMP deaminase
chr8	48563551	48564694	+	48552176	48564694	A5SS	0.25	50	50	ENSMUST00000174278.8	ENSMUSG00000031562.16	Dctd	chr8	protein_coding	dCMP deaminase
chr8	48563316	48564694	+	48563283	48564694	A5SS	0.25	50	50	ENSMUST00000170263.9	ENSMUSG00000031562.16	Dctd	chr8	protein_coding	dCMP deaminase
chr8	48563551	48564694	+	48563283	48564694	A5SS	0.25	50	50	ENSMUST00000170263.9	ENSMUSG00000031562.16	Dctd	chr8	protein_coding	dCMP deaminase
chr8	48563551	48564694	+	48563316	48564694	A5SS	0.25	50	50	ENSMUST00000033966.13	ENSMUSG00000031562.16	Dctd	chr8	protein_coding	dCMP deaminase
chr8	48565138	48606194	+	48565138	48590293	3pMXE	0.5	50	50	ENSMUST00000173991.8	ENSMUSG00000031562.16	Dctd	chr8	protein_coding	dCMP deaminase
chr8	48732225	48740826	-	48732225;48740188	48740168;48740826	ES	0.5	50	50	ENSMUST00000033965.14	ENSMUSG00000031561.17	Tenm3	chr8	protein_coding	teneurin transmembrane protein 3
chr8	48763804	48788624	-	48763804;48766299	48766273;48788624	ES	0.5	50	50	ENSMUST00000033965.14	ENSMUSG00000031561.17	Tenm3	chr8	protein_coding	teneurin transmembrane protein 3
chr8	48752748	48753031	-	48752748	48753790	A5SS	0.5	50	50	ENSMUST00000033965.14	ENSMUSG00000031561.17	Tenm3	chr8	protein_coding	teneurin transmembrane protein 3
chr8	48848709	49008188	-	48848709	48870043	A5SS&ES	0.5	50	50	ENSMUST00000033965.14	ENSMUSG00000031561.17	Tenm3	chr8	protein_coding	teneurin transmembrane protein 3
chr8	48870280	49008188	-	48870280	49099293	A5SS	0.25	50	50	ENSMUST00000033965.14	ENSMUSG00000031561.17	Tenm3	chr8	protein_coding	teneurin transmembrane protein 3
chr8	48870280	49008750	-	48870280	49099293	A5SS	0.25	50	50	ENSMUST00000033965.14	ENSMUSG00000031561.17	Tenm3	chr8	protein_coding	teneurin transmembrane protein 3
chr8	48870280	49008913	-	48870280	49099293	A5SS	0.25	50	50	ENSMUST00000033965.14	ENSMUSG00000031561.17	Tenm3	chr8	protein_coding	teneurin transmembrane protein 3
chr8	48848709	49008188	-	48848709;48870280	48870043;49008188	ES	0.5	50	50	ENSMUST00000110346.9	ENSMUSG00000031561.17	Tenm3	chr8	protein_coding	teneurin transmembrane protein 3
chr8	48870280	49008750	-	48870280	49008188	5pMXE	0.25	50	50	ENSMUST00000110346.9	ENSMUSG00000031561.17	Tenm3	chr8	protein_coding	teneurin transmembrane protein 3
chr8	48870280	49008913	-	48870280	49008188	5pMXE	0.25	50	50	ENSMUST00000110346.9	ENSMUSG00000031561.17	Tenm3	chr8	protein_coding	teneurin transmembrane protein 3
chr8	48870280	49008913	-	48870280	49008750	5pMXE	0.25	50	50	ENSMUST00000110345.8	ENSMUSG00000031561.17	Tenm3	chr8	protein_coding	teneurin transmembrane protein 3
chr8	49296926	49297138	+	49296926	49317223	A3SS	0.33	50	50	ENSMUST00000187946.7	ENSMUSG00000100706.7	Gm19744	chr8	lncRNA	predicted gene, 19744
chr8	49296926	49300375	+	49296926	49317223	A3SS	0.33	50	50	ENSMUST00000187946.7	ENSMUSG00000100706.7	Gm19744	chr8	lncRNA	predicted gene, 19744
chr8	49312284	49317223	+	49296926	49317223	A5SS	0.5	50	50	ENSMUST00000187946.7	ENSMUSG00000100706.7	Gm19744	chr8	lncRNA	predicted gene, 19744
chr8	49296926	49297138	+	49296926	49300375	A3SS	0.33	50	50	ENSMUST00000190967.2	ENSMUSG00000100706.7	Gm19744	chr8	lncRNA	predicted gene, 19744
chr8	49297281	49297440	+	49297285	49297440	A5SS	0.5	50	50	ENSMUST00000186135.2	ENSMUSG00000100706.7	Gm19744	chr8	lncRNA	predicted gene, 19744
chr8	49297281	49297604	+	49297281	49297440	3pMXE	0.5	50	50	ENSMUST00000185458.2	ENSMUSG00000100706.7	Gm19744	chr8	lncRNA	predicted gene, 19744
chr8	49825050	49916270	+	49825050	49830064	3pMXE	0.5	50	50	ENSMUST00000143556.9	ENSMUSG00000031559.16	4930555F03Rik	chr8	lncRNA	RIKEN cDNA 4930555F03 gene
chr8	49825050;49916436	49916270;49948328	+	49825050;49896786	49830064;49948328	MXE	0.5	100	100	ENSMUST00000212179.2	ENSMUSG00000031559.16	4930555F03Rik	chr8	lncRNA	RIKEN cDNA 4930555F03 gene
chr8	49953541	49970756	+	49953541	49985735	A3SS	0.5	50	50	ENSMUST00000212179.2	ENSMUSG00000031559.16	4930555F03Rik	chr8	lncRNA	RIKEN cDNA 4930555F03 gene
chr8	49938667	49953465	+	49948465	49953465	A5SS&ES	0.33	50	50	ENSMUST00000212179.2	ENSMUSG00000031559.16	4930555F03Rik	chr8	lncRNA	RIKEN cDNA 4930555F03 gene
chr8	49948530	49953465	+	49948465	49953465	A5SS	0.33	50	50	ENSMUST00000212179.2	ENSMUSG00000031559.16	4930555F03Rik	chr8	lncRNA	RIKEN cDNA 4930555F03 gene
chr8	49896786	49948328	+	49916436	49948328	A5SS&ES	0.5	50	50	ENSMUST00000033963.13	ENSMUSG00000031559.16	4930555F03Rik	chr8	lncRNA	RIKEN cDNA 4930555F03 gene
chr8	49938667	49953465	+	49948530	49953465	A5SS&ES	0.33	50	50	ENSMUST00000033963.13	ENSMUSG00000031559.16	4930555F03Rik	chr8	lncRNA	RIKEN cDNA 4930555F03 gene
chr8	50274562	50350367	+	50274562	50296426	3pMXE	0.5	50	50	ENSMUST00000210742.2	ENSMUSG00000109907.2	Gm45321	chr8	lncRNA	predicted gene 45321
chr8	50354697;50387540	50387403;50399629	+	50354697	50399629	cassetteExon	0.5	100	100	ENSMUST00000209758.2	ENSMUSG00000109907.2	Gm45321	chr8	lncRNA	predicted gene 45321
chr8	50350505	50352465	+	50350505	50354609	A3SS	0.5	50	50	ENSMUST00000209758.2	ENSMUSG00000109907.2	Gm45321	chr8	lncRNA	predicted gene 45321
chr8	50349113	50350367	+	50274562	50350367	A5SS	0.5	50	50	ENSMUST00000209758.2	ENSMUSG00000109907.2	Gm45321	chr8	lncRNA	predicted gene 45321
chr8	50654723	50868169	-	50571392	50868169	A3SS	0.33	50	50	ENSMUST00000210850.2	ENSMUSG00000109838.2	Gm45341	chr8	lncRNA	predicted gene 45341
chr8	50846006	50868169	-	50571392	50868169	A3SS	0.33	50	50	ENSMUST00000210850.2	ENSMUSG00000109838.2	Gm45341	chr8	lncRNA	predicted gene 45341
chr8	50846006	50868169	-	50654723	50868169	A3SS	0.33	50	50	ENSMUST00000209514.2	ENSMUSG00000109741.2	Gm45455	chr8	lncRNA	predicted gene 45455
chr8	51264799	51368900	-	51264799;51356985	51356938;51368900	ES	0.5	50	50	ENSMUST00000210222.2	ENSMUSG00000110246.2	C130073E24Rik	chr8	lncRNA	RIKEN cDNA C130073E24 gene
chr8	53894170	53918418	+	53894170	53931295	A3SS	0.5	50	50	ENSMUST00000210964.2	ENSMUSG00000110362.2	Gm45554	chr8	lncRNA	predicted gene 45554
chr8	53889484	53894076	+	53889333	53894076	A5SS	0.5	50	50	ENSMUST00000210964.2	ENSMUSG00000110362.2	Gm45554	chr8	lncRNA	predicted gene 45554
chr8	53970903;53971730	53971651;53971951	+	53970903	53971951	cassetteExon	0.5	100	100	ENSMUST00000211424.2	ENSMUSG00000031521.6	Aga	chr8	protein_coding	aspartylglucosaminidase
chr8	53965943	53966577	+	53964966	53966577	A5SS	0.5	50	50	ENSMUST00000211424.2	ENSMUSG00000031521.6	Aga	chr8	protein_coding	aspartylglucosaminidase
chr8	54042134	54044381	-	54042134	54052134	A5SS	0.5	50	50	ENSMUST00000047768.11	ENSMUSG00000039396.12	Neil3	chr8	protein_coding	nei like 3 (E. coli)
chr8	54062573	54062763	-	54062573	54076653	A5SS	0.25	50	50	ENSMUST00000047768.11	ENSMUSG00000039396.12	Neil3	chr8	protein_coding	nei like 3 (E. coli)
chr8	54062573	54064324	-	54062573	54076653	A5SS	0.25	50	50	ENSMUST00000047768.11	ENSMUSG00000039396.12	Neil3	chr8	protein_coding	nei like 3 (E. coli)
chr8	54062573	54065380	-	54062573	54076653	A5SS	0.25	50	50	ENSMUST00000047768.11	ENSMUSG00000039396.12	Neil3	chr8	protein_coding	nei like 3 (E. coli)
chr8	54076777	54091497	-	54076777	54091791	A5SS	0.5	50	50	ENSMUST00000047768.11	ENSMUSG00000039396.12	Neil3	chr8	protein_coding	nei like 3 (E. coli)
chr8	54062573	54064324	-	54062573;54062847	54062763;54064324	ES	0.5	50	50	ENSMUST00000149053.8	ENSMUSG00000039396.12	Neil3	chr8	protein_coding	nei like 3 (E. coli)
chr8	54062573	54065380	-	54062573	54064324	5pMXE	0.25	50	50	ENSMUST00000126157.8	ENSMUSG00000039396.12	Neil3	chr8	protein_coding	nei like 3 (E. coli)
chr8	54062573	54062763	-	54062573	54065380	A5SS	0.25	50	50	ENSMUST00000153267.3	ENSMUSG00000039396.12	Neil3	chr8	protein_coding	nei like 3 (E. coli)
chr8	54612518	54633737	+	54612518;54622211	54622060;54633737	ES	0.5	50	50	ENSMUST00000033919.6	ENSMUSG00000031520.7	Vegfc	chr8	protein_coding	vascular endothelial growth factor C
chr8	54610194	54612449	+	54610194	54612328	A3SS	0.5	50	50	ENSMUST00000033919.6	ENSMUSG00000031520.7	Vegfc	chr8	protein_coding	vascular endothelial growth factor C
chr8	54612518	54633737	+	54612518	54622060	3pMXE	0.5	50	50	ENSMUST00000209703.2	ENSMUSG00000031520.7	Vegfc	chr8	protein_coding	vascular endothelial growth factor C
chr8	55003675	55033861	+	54982872	55033861	A5SS	0.2	50	50	ENSMUST00000209937.2	ENSMUSG00000031519.5	Asb5	chr8	protein_coding	ankyrin repeat and SOCs box-containing 5
chr8	55024545	55033861	+	54982872	55033861	A5SS	0.2	50	50	ENSMUST00000209937.2	ENSMUSG00000031519.5	Asb5	chr8	protein_coding	ankyrin repeat and SOCs box-containing 5
chr8	55024770	55033861	+	54982872	55033861	A5SS	0.2	50	50	ENSMUST00000209937.2	ENSMUSG00000031519.5	Asb5	chr8	protein_coding	ankyrin repeat and SOCs box-containing 5
chr8	55030561	55033861	+	54982872	55033861	A5SS	0.2	50	50	ENSMUST00000209937.2	ENSMUSG00000031519.5	Asb5	chr8	protein_coding	ankyrin repeat and SOCs box-containing 5
chr8	55024545	55033861	+	55003675	55033861	A5SS	0.2	50	50	ENSMUST00000033918.4	ENSMUSG00000031519.5	Asb5	chr8	protein_coding	ankyrin repeat and SOCs box-containing 5
chr8	55024770	55033861	+	55003675	55033861	A5SS	0.2	50	50	ENSMUST00000033918.4	ENSMUSG00000031519.5	Asb5	chr8	protein_coding	ankyrin repeat and SOCs box-containing 5
chr8	55030561	55033861	+	55003675	55033861	A5SS	0.2	50	50	ENSMUST00000033918.4	ENSMUSG00000031519.5	Asb5	chr8	protein_coding	ankyrin repeat and SOCs box-containing 5
chr8	55024545	55033861	+	55024770	55033861	A5SS	0.2	50	50	ENSMUST00000239166.2	ENSMUSG00000031519.5	Asb5	chr8	protein_coding	ankyrin repeat and SOCs box-containing 5
chr8	55030561	55033861	+	55024770	55033861	A5SS	0.2	50	50	ENSMUST00000239166.2	ENSMUSG00000031519.5	Asb5	chr8	protein_coding	ankyrin repeat and SOCs box-containing 5
chr8	55024545	55033861	+	55024545;55030561	55030501;55033861	ES	0.33	50	50	ENSMUST00000239106.2	ENSMUSG00000031519.5	Asb5	chr8	protein_coding	ankyrin repeat and SOCs box-containing 5
chr8	55096260	55101255	-	55096260;55098393	55098373;55101255	ES	0.5	50	50	ENSMUST00000144711.9	ENSMUSG00000039375.17	Wdr17	chr8	protein_coding	WD repeat domain 17
chr8	55118165	55123336	-	55118165;55121470	55121384;55123336	ES	0.5	50	50	ENSMUST00000144711.9	ENSMUSG00000039375.17	Wdr17	chr8	protein_coding	WD repeat domain 17
chr8	55143269	55149304	-	55143269;55146275	55146092;55149304	ES	0.5	50	50	ENSMUST00000144711.9	ENSMUSG00000039375.17	Wdr17	chr8	protein_coding	WD repeat domain 17
chr8	55156974	55177323	-	55156974	55171665	5pMXE	0.33	50	50	ENSMUST00000144711.9	ENSMUSG00000039375.17	Wdr17	chr8	protein_coding	WD repeat domain 17
chr8	55088574	55091322	-	55088578	55091322	A3SS	0.5	50	50	ENSMUST00000144711.9	ENSMUSG00000039375.17	Wdr17	chr8	protein_coding	WD repeat domain 17
chr8	55096284	55098373	-	55096260	55098373	A3SS	0.5	50	50	ENSMUST00000144711.9	ENSMUSG00000039375.17	Wdr17	chr8	protein_coding	WD repeat domain 17
chr8	55140812	55143039	-	55140761	55143039	A3SS	0.33	50	50	ENSMUST00000144711.9	ENSMUSG00000039375.17	Wdr17	chr8	protein_coding	WD repeat domain 17
chr8	55156974	55159488	-	55156974	55171665	A5SS	0.33	50	50	ENSMUST00000144711.9	ENSMUSG00000039375.17	Wdr17	chr8	protein_coding	WD repeat domain 17
chr8	55149432	55177323	-	55149432;55156974	55156869;55177323	ES	0.33	50	50	ENSMUST00000127511.9	ENSMUSG00000039375.17	Wdr17	chr8	protein_coding	WD repeat domain 17
chr8	55096260	55101255	-	55098393	55101255	A3SS&ES	0.5	50	50	ENSMUST00000127511.9	ENSMUSG00000039375.17	Wdr17	chr8	protein_coding	WD repeat domain 17
chr8	55156974	55159488	-	55156974	55177323	A5SS	0.33	50	50	ENSMUST00000127511.9	ENSMUSG00000039375.17	Wdr17	chr8	protein_coding	WD repeat domain 17
chr8	55149432	55228331	-	55149432	55177323	5pMXE	0.33	50	50	ENSMUST00000175915.8	ENSMUSG00000039375.17	Wdr17	chr8	protein_coding	WD repeat domain 17
chr8	55140761	55143039	-	55134565	55143039	A3SS	0.33	50	50	ENSMUST00000144482.2	ENSMUSG00000039375.17	Wdr17	chr8	protein_coding	WD repeat domain 17
chr8	55140812	55143039	-	55134565	55143039	A3SS	0.33	50	50	ENSMUST00000144482.2	ENSMUSG00000039375.17	Wdr17	chr8	protein_coding	WD repeat domain 17
chr8	55134565	55138431	-	55134565	55143039	A5SS	0.5	50	50	ENSMUST00000144482.2	ENSMUSG00000039375.17	Wdr17	chr8	protein_coding	WD repeat domain 17
chr8	55143269;55149432	55149304;55177323	-	55143269	55177323	cassetteExon	0.5	100	100	ENSMUST00000126316.8	ENSMUSG00000039375.17	Wdr17	chr8	protein_coding	WD repeat domain 17
chr8	55156974	55177323	-	55143269	55177323	A3SS	0.33	50	50	ENSMUST00000126316.8	ENSMUSG00000039375.17	Wdr17	chr8	protein_coding	WD repeat domain 17
chr8	55143269	55146092	-	55143269	55177323	A5SS	0.33	50	50	ENSMUST00000126316.8	ENSMUSG00000039375.17	Wdr17	chr8	protein_coding	WD repeat domain 17
chr8	55143269	55149304	-	55146275	55149304	3pMXE	0.5	50	50	ENSMUST00000176866.8	ENSMUSG00000039375.17	Wdr17	chr8	protein_coding	WD repeat domain 17
chr8	55334876	55339942	-	55228457	55339942	A3SS	0.5	50	50	ENSMUST00000176866.8	ENSMUSG00000039375.17	Wdr17	chr8	protein_coding	WD repeat domain 17
chr8	55149432	55156869	-	55149432	55228331	A5SS	0.33	50	50	ENSMUST00000176866.8	ENSMUSG00000039375.17	Wdr17	chr8	protein_coding	WD repeat domain 17
chr8	55162588	55163278	+	55162577	55163278	A5SS	0.5	50	50	ENSMUST00000161681.2	ENSMUSG00000089719.2	Gm15758	chr8	lncRNA	predicted gene 15758
chr8	56492840	56515466	+	56492840	56495195	3pMXE	0.5	50	50	ENSMUST00000164020.2	ENSMUSG00000038257.11	Glra3	chr8	protein_coding	glycine receptor, alpha 3 subunit
chr8	56985935	56991646	-	56985935;56986070	56986020;56991646	ES	0.5	50	50	ENSMUST00000123493.8	ENSMUSG00000038215.16	Cep44	chr8	protein_coding	centrosomal protein 44
chr8	57000559;57003156	57003098;57003580	-	57000559	57003580	cassetteExon	0.5	100	100	ENSMUST00000040330.15	ENSMUSG00000038215.16	Cep44	chr8	protein_coding	centrosomal protein 44
chr8	57000559	57002260	-	57000559	57003580	A5SS	0.25	50	50	ENSMUST00000040330.15	ENSMUSG00000038215.16	Cep44	chr8	protein_coding	centrosomal protein 44
chr8	57000559	57003723	-	57000559	57003580	A5SS	0.25	50	50	ENSMUST00000040330.15	ENSMUSG00000038215.16	Cep44	chr8	protein_coding	centrosomal protein 44
chr8	57000559	57003723	-	57000559;57003156	57003098;57003723	ES	0.5	50	50	ENSMUST00000140107.8	ENSMUSG00000038215.16	Cep44	chr8	protein_coding	centrosomal protein 44
chr8	57000559;57002419	57002260;57003098	-	57000559	57003098	cassetteExon	0.5	100	100	ENSMUST00000140107.8	ENSMUSG00000038215.16	Cep44	chr8	protein_coding	centrosomal protein 44
chr8	57000559	57003580	-	57000559	57003098	A5SS&ES	0.25	50	50	ENSMUST00000140107.8	ENSMUSG00000038215.16	Cep44	chr8	protein_coding	centrosomal protein 44
chr8	57003156	57003580	-	57003156	57003723	A5SS	0.5	50	50	ENSMUST00000140107.8	ENSMUSG00000038215.16	Cep44	chr8	protein_coding	centrosomal protein 44
chr8	57000559	57002260	-	57000559	57003723	A5SS	0.25	50	50	ENSMUST00000135337.8	ENSMUSG00000038215.16	Cep44	chr8	protein_coding	centrosomal protein 44
chr8	57000559	57003723	-	57000559	57003098	A5SS&ES	0.25	50	50	ENSMUST00000130930.2	ENSMUSG00000038215.16	Cep44	chr8	protein_coding	centrosomal protein 44
chr8	57000559	57003098	-	57002419	57003098	3pMXE	0.5	50	50	ENSMUST00000127877.2	ENSMUSG00000038215.16	Cep44	chr8	protein_coding	centrosomal protein 44
chr8	57004411;57017198	57017096;57017593	+	57004411	57017593	cassetteExon	0.5	100	100	ENSMUST00000156840.3	ENSMUSG00000038206.14	Fbxo8	chr8	protein_coding	F-box protein 8
chr8	57022445	57041042	+	57022445	57044471	A3SS	0.5	50	50	ENSMUST00000110322.9	ENSMUSG00000038206.14	Fbxo8	chr8	protein_coding	F-box protein 8
chr8	57043289	57044471	+	57022445	57044471	A5SS	0.5	50	50	ENSMUST00000110322.9	ENSMUSG00000038206.14	Fbxo8	chr8	protein_coding	F-box protein 8
chr8	57329537	57341528	-	57314394	57341528	A3SS	0.5	50	50	ENSMUST00000209257.2	ENSMUSG00000110000.2	Gm33501	chr8	lncRNA	predicted gene, 33501
chr8	57757467	57760114	-	57741548	57760114	A3SS	0.2	50	50	ENSMUST00000226075.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57757548	57760114	-	57741548	57760114	A3SS	0.2	50	50	ENSMUST00000226075.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57758450	57760114	-	57741548	57760114	A3SS	0.2	50	50	ENSMUST00000226075.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57760053	57760114	-	57741548	57760114	A3SS	0.2	50	50	ENSMUST00000226075.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57760210	57773219	-	57760474	57773219	A3SS&ES	0.12	50	50	ENSMUST00000226075.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57767646	57773219	-	57760474	57773219	A3SS	0.12	50	50	ENSMUST00000226075.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57767649	57773219	-	57760474	57773219	A3SS	0.12	50	50	ENSMUST00000226075.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57771482	57773219	-	57760474	57773219	A3SS	0.12	50	50	ENSMUST00000226075.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57772623	57773219	-	57760474	57773219	A3SS	0.12	50	50	ENSMUST00000226075.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57773115	57773219	-	57760474	57773219	A3SS	0.12	50	50	ENSMUST00000226075.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57760206	57766674	-	57760206	57760332	A5SS&ES	0.5	50	50	ENSMUST00000226075.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57741548;57760210	57760114;57773219	-	57741548	57773219	cassetteExon	0.5	100	100	ENSMUST00000223874.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57741548;57760474	57760114;57773219	-	57741548	57773219	cassetteExon	0.5	100	100	ENSMUST00000223874.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57767646	57773219	-	57741548	57773219	A3SS	0.12	50	50	ENSMUST00000223874.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57767649	57773219	-	57741548	57773219	A3SS	0.12	50	50	ENSMUST00000223874.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57771482	57773219	-	57741548	57773219	A3SS	0.12	50	50	ENSMUST00000223874.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57772623	57773219	-	57741548	57773219	A3SS	0.12	50	50	ENSMUST00000223874.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57773115	57773219	-	57741548	57773219	A3SS	0.12	50	50	ENSMUST00000223874.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57773475	57773724	-	57773323	57773724	A3SS	0.5	50	50	ENSMUST00000223874.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57760210	57773219	-	57760210	57767550	5pMXE	0.25	50	50	ENSMUST00000225073.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57760210;57766872	57766674;57767550	-	57760210	57767550	cassetteExon	0.5	100	100	ENSMUST00000225073.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57757467	57758290	-	57746227	57758290	A3SS	0.5	50	50	ENSMUST00000225073.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57757467	57760114	-	57758450	57760114	A3SS&ES	0.25	50	50	ENSMUST00000225073.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57757548	57760114	-	57758450	57760114	A3SS&ES	0.25	50	50	ENSMUST00000225073.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57760053	57760114	-	57758450	57760114	A3SS	0.25	50	50	ENSMUST00000225073.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57760210	57764528	-	57760210	57767550	A5SS	0.25	50	50	ENSMUST00000225073.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57757467	57760114	-	57757467;57758450	57758290;57760114	ES	0.25	50	50	ENSMUST00000225995.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57760206	57766674	-	57760210	57766674	A3SS	0.5	50	50	ENSMUST00000225995.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57757467	57757923	-	57757467	57758290	A5SS	0.33	50	50	ENSMUST00000225995.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57760210	57764528	-	57760210	57766674	A5SS	0.33	50	50	ENSMUST00000225995.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57767649	57773219	-	57767649	57772520	5pMXE	0.2	50	50	ENSMUST00000224717.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57767649;57771482	57771441;57772520	-	57767649	57772520	cassetteExon	0.5	100	100	ENSMUST00000224717.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57767649	57768390	-	57767649	57772520	A5SS	0.2	50	50	ENSMUST00000224717.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57767649	57772968	-	57767649	57772520	A5SS	0.2	50	50	ENSMUST00000224717.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57767649	57771441	-	57767649;57768421	57768390;57771441	ES	0.5	50	50	ENSMUST00000186386.8	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57767649;57772623	57772520;57773219	-	57767649;57771482	57768390;57773219	MXE	0.5	100	100	ENSMUST00000186386.8	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57771482;57772623	57772520;57773219	-	57771482	57773219	cassetteExon	0.5	100	100	ENSMUST00000186386.8	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57767649;57773115	57772968;57773219	-	57767649;57771482	57768390;57773219	MXE	0.5	100	100	ENSMUST00000186386.8	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57767646	57773219	-	57771482	57773219	A3SS&ES	0.14	50	50	ENSMUST00000186386.8	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57760210	57773219	-	57760210;57767649	57767550;57773219	ES	0.14	50	50	ENSMUST00000185946.7	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57767649;57771482	57771441;57773219	-	57767649	57773219	cassetteExon	0.5	100	100	ENSMUST00000185946.7	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57767649;57772623	57772520;57773219	-	57767649	57773219	cassetteExon	0.5	100	100	ENSMUST00000185946.7	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57767649;57773115	57772968;57773219	-	57767649	57773219	cassetteExon	0.5	100	100	ENSMUST00000185946.7	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57767646	57773219	-	57767649	57773219	A3SS	0.14	50	50	ENSMUST00000185946.7	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57767649	57768390	-	57767649	57773219	A5SS	0.2	50	50	ENSMUST00000185946.7	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57772623	57773219	-	57767646	57773219	A3SS	0.14	50	50	ENSMUST00000224148.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57773115	57773219	-	57767646	57773219	A3SS	0.14	50	50	ENSMUST00000224148.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57760210;57767646	57767550;57773219	-	57760210	57773219	cassetteExon	0.5	100	100	ENSMUST00000185793.7	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57757548	57760114	-	57757467	57760114	A3SS	0.2	50	50	ENSMUST00000185793.7	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57760053	57760114	-	57757467	57760114	A3SS	0.2	50	50	ENSMUST00000185793.7	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57771482	57773219	-	57760210	57773219	A3SS	0.14	50	50	ENSMUST00000185793.7	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57772623	57773219	-	57760210	57773219	A3SS	0.14	50	50	ENSMUST00000185793.7	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57773115	57773219	-	57760210	57773219	A3SS	0.14	50	50	ENSMUST00000185793.7	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57757467	57757923	-	57757467	57760114	A5SS	0.33	50	50	ENSMUST00000185793.7	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57760210	57764528	-	57760210	57773219	A5SS	0.25	50	50	ENSMUST00000185793.7	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57760210	57766674	-	57760210	57773219	A5SS	0.25	50	50	ENSMUST00000185793.7	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57767649;57772623	57772520;57773219	-	57767649;57771482	57771441;57773219	MXE	0.5	100	100	ENSMUST00000224827.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57767649;57773115	57772968;57773219	-	57767649;57771482	57771441;57773219	MXE	0.5	100	100	ENSMUST00000224827.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57767649;57773115	57772968;57773219	-	57767649;57772623	57771441;57773219	MXE	0.5	100	100	ENSMUST00000224153.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57760053	57760114	-	57757548	57760114	A3SS	0.2	50	50	ENSMUST00000223980.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57741548	57773219	-	57760210	57773219	3pMXE	0.12	50	50	ENSMUST00000225291.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57773475	57773638	-	57773475	57773724	A5SS	0.5	50	50	ENSMUST00000226014.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57760206;57760474	57760332;57773219	-	57760206;57767649	57766674;57773219	MXE	0.5	100	100	ENSMUST00000225650.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57760210	57767550	-	57766872	57767550	A3SS&ES	0.5	50	50	ENSMUST00000225650.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57760210	57773219	-	57767649	57773219	A3SS&ES	0.14	50	50	ENSMUST00000225650.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57767649;57772623	57772520;57773219	-	57767649;57773115	57772968;57773219	MXE	0.5	100	100	ENSMUST00000225042.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57767649	57768390	-	57767649	57772968	A5SS	0.2	50	50	ENSMUST00000225042.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57767649	57773219	-	57771482	57773219	3pMXE	0.12	50	50	ENSMUST00000225514.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57773115	57773219	-	57771482	57773219	A3SS	0.12	50	50	ENSMUST00000225514.2	ENSMUSG00000100510.8	Hand2os1	chr8	lncRNA	Hand2, opposite strand 1
chr8	57785883	57787423	-	57785883	57786782	A5SS&ES	0.5	50	50	ENSMUST00000211434.2	ENSMUSG00000109697.2	Gm34030	chr8	lncRNA	predicted gene, 34030
chr8	57785668	57785805	+	57785668	57798251	A3SS	0.5	50	50	ENSMUST00000210614.2	ENSMUSG00000097910.3	Hdnr	chr8	lncRNA	Hand2 downstream lncRNA
chr8	57794097	57798251	+	57785668	57798251	A5SS	0.5	50	50	ENSMUST00000210614.2	ENSMUSG00000097910.3	Hdnr	chr8	lncRNA	Hand2 downstream lncRNA
chr8	57958942	57959562	+	57943501	57959562	A5SS	0.5	50	50	ENSMUST00000180690.2	ENSMUSG00000096917.3	2500002B13Rik	chr8	lncRNA	RIKEN cDNA 2500002B13 gene
chr8	57965039	57965549	+	57965039	57965609	A3SS	0.5	50	50	ENSMUST00000067925.8	ENSMUSG00000054717.8	Hmgb2	chr8	protein_coding	high mobility group box 2
chr8	57993171;57996051	57995869;57998363	-	57993171;57995728	57995546;57998363	MXE	0.5	100	100	ENSMUST00000034021.12	ENSMUSG00000031608.14	Galnt7	chr8	protein_coding	polypeptide N-acetylgalactosaminyltransferase 7
chr8	57991242	57991389	-	57991242	57993054	A5SS	0.5	50	50	ENSMUST00000034021.12	ENSMUSG00000031608.14	Galnt7	chr8	protein_coding	polypeptide N-acetylgalactosaminyltransferase 7
chr8	57995728	57998363	-	57996051	57998363	A3SS	0.5	50	50	ENSMUST00000156907.2	ENSMUSG00000031608.14	Galnt7	chr8	protein_coding	polypeptide N-acetylgalactosaminyltransferase 7
chr8	58105984	58110422	+	58105021	58110422	A5SS	0.5	50	50	ENSMUST00000211284.2	ENSMUSG00000110419.2	AW046200	chr8	lncRNA	expressed sequence AW046200
chr8	58110548	58115331	+	58112698	58115331	A5SS&ES	0.5	50	50	ENSMUST00000211284.2	ENSMUSG00000110419.2	AW046200	chr8	lncRNA	expressed sequence AW046200
chr8	58989048;59352765	59352672;59364371	-	58989048	59364371	cassetteExon	0.5	100	100	ENSMUST00000204128.3	ENSMUSG00000096914.4	Galntl6	chr8	protein_coding	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
chr8	58954492	58988940	-	58926016	58988940	A3SS	0.5	50	50	ENSMUST00000204128.3	ENSMUSG00000096914.4	Galntl6	chr8	protein_coding	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
chr8	58248064	58249308	-	58248064	58257248	A5SS	0.5	50	50	ENSMUST00000204128.3	ENSMUSG00000096914.4	Galntl6	chr8	protein_coding	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
chr8	58290442	58295999	-	58290442	58310551	A5SS	0.5	50	50	ENSMUST00000204128.3	ENSMUSG00000096914.4	Galntl6	chr8	protein_coding	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
chr8	58989048	59046725	-	58989048	59364371	A5SS	0.33	50	50	ENSMUST00000204128.3	ENSMUSG00000096914.4	Galntl6	chr8	protein_coding	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
chr8	58989048	59046725	-	58989048	59352672	A5SS	0.33	50	50	ENSMUST00000146513.8	ENSMUSG00000096914.4	Galntl6	chr8	protein_coding	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
chr8	60971640	60973029	+	60971640	60979605	A3SS	0.5	50	50	ENSMUST00000079472.4	ENSMUSG00000057228.7	Aadat	chr8	protein_coding	aminoadipate aminotransferase
chr8	60959651	60960123	+	60959313	60960123	A5SS	0.5	50	50	ENSMUST00000079472.4	ENSMUSG00000057228.7	Aadat	chr8	protein_coding	aminoadipate aminotransferase
chr8	61086092;61109923	61109494;61124058	+	61086092	61124058	cassetteExon	0.5	100	100	ENSMUST00000161421.2	ENSMUSG00000031647.11	Mfap3l	chr8	protein_coding	microfibrillar-associated protein 3-like
chr8	61108479	61109494	+	61086092	61109494	A5SS	0.33	50	50	ENSMUST00000160719.8	ENSMUSG00000031647.11	Mfap3l	chr8	protein_coding	microfibrillar-associated protein 3-like
chr8	61108700	61109494	+	61086092	61109494	A5SS	0.33	50	50	ENSMUST00000160719.8	ENSMUSG00000031647.11	Mfap3l	chr8	protein_coding	microfibrillar-associated protein 3-like
chr8	61108700	61109494	+	61108479	61109494	A5SS	0.33	50	50	ENSMUST00000161702.8	ENSMUSG00000031647.11	Mfap3l	chr8	protein_coding	microfibrillar-associated protein 3-like
chr8	61343570	61346735	+	61343570	61358582	A3SS	0.5	50	50	ENSMUST00000146863.2	ENSMUSG00000038005.16	Hpf1	chr8	protein_coding	histone PARylation factor 1
chr8	61357121	61358582	+	61343570	61358582	A5SS	0.5	50	50	ENSMUST00000146863.2	ENSMUSG00000038005.16	Hpf1	chr8	protein_coding	histone PARylation factor 1
chr8	61349870	61357034	+	61349870;61353268	61353118;61357034	ES	0.5	50	50	ENSMUST00000149267.8	ENSMUSG00000038005.16	Hpf1	chr8	protein_coding	histone PARylation factor 1
chr8	61346894;61348684	61348495;61349772	+	61346894	61349772	cassetteExon	0.5	100	100	ENSMUST00000149267.8	ENSMUSG00000038005.16	Hpf1	chr8	protein_coding	histone PARylation factor 1
chr8	61394448	61428766	-	61394448	61407577	5pMXE	0.33	50	50	ENSMUST00000056508.12	ENSMUSG00000004319.16	Clcn3	chr8	protein_coding	chloride channel, voltage-sensitive 3
chr8	61394448	61435810	-	61394448	61407577	5pMXE	0.33	50	50	ENSMUST00000056508.12	ENSMUSG00000004319.16	Clcn3	chr8	protein_coding	chloride channel, voltage-sensitive 3
chr8	61366209;61367862	61367612;61372374	-	61366209	61372374	cassetteExon	0.5	100	100	ENSMUST00000056508.12	ENSMUSG00000004319.16	Clcn3	chr8	protein_coding	chloride channel, voltage-sensitive 3
chr8	61366209;61367862	61367787;61372374	-	61366209	61372374	cassetteExon	0.5	100	100	ENSMUST00000056508.12	ENSMUSG00000004319.16	Clcn3	chr8	protein_coding	chloride channel, voltage-sensitive 3
chr8	61394448;61428941	61428766;61435810	-	61394448	61435810	cassetteExon	0.5	100	100	ENSMUST00000093490.9	ENSMUSG00000004319.16	Clcn3	chr8	protein_coding	chloride channel, voltage-sensitive 3
chr8	61366209	61367787	-	61366209	61367612	A5SS	0.33	50	50	ENSMUST00000145741.8	ENSMUSG00000004319.16	Clcn3	chr8	protein_coding	chloride channel, voltage-sensitive 3
chr8	61459810	61465127	+	61459810;61460289	61460193;61465127	ES	0.5	50	50	ENSMUST00000120689.8	ENSMUSG00000031644.20	Nek1	chr8	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 1
chr8	61497141	61502818	+	61497141;61497367	61497293;61502818	ES	0.5	50	50	ENSMUST00000120689.8	ENSMUSG00000031644.20	Nek1	chr8	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 1
chr8	61507656	61525310	+	61507656;61524868	61524785;61525310	ES	0.5	50	50	ENSMUST00000120689.8	ENSMUSG00000031644.20	Nek1	chr8	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 1
chr8	61502981;61503193	61503062;61507554	+	61502981	61507554	cassetteExon	0.5	100	100	ENSMUST00000120689.8	ENSMUSG00000031644.20	Nek1	chr8	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 1
chr8	61497141	61502818	+	61497141	61497293	3pMXE	0.5	50	50	ENSMUST00000125717.8	ENSMUSG00000031644.20	Nek1	chr8	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 1
chr8	61816279	61817388	+	61816279	61825542	A3SS	0.5	50	50	ENSMUST00000034060.7	ENSMUSG00000031642.10	Sh3rf1	chr8	protein_coding	SH3 domain containing ring finger 1
chr8	61943094;61943727	61943620;61944579	+	61943094	61944579	cassetteExon	0.5	100	100	ENSMUST00000034058.14	ENSMUSG00000031641.15	Cbr4	chr8	protein_coding	carbonyl reductase 4
chr8	62003279	62137769	-	62003279	62044094	5pMXE	0.5	50	50	ENSMUST00000121200.9	ENSMUSG00000058056.17	Palld	chr8	protein_coding	palladin, cytoskeletal associated protein
chr8	61986609;61987942	61987892;61988720	-	61986609	61988720	cassetteExon	0.5	100	100	ENSMUST00000121200.9	ENSMUSG00000058056.17	Palld	chr8	protein_coding	palladin, cytoskeletal associated protein
chr8	61968068	61968237	-	61966558	61968237	A3SS	0.5	50	50	ENSMUST00000121200.9	ENSMUSG00000058056.17	Palld	chr8	protein_coding	palladin, cytoskeletal associated protein
chr8	61991857	62003200	-	61991857	62002605	A5SS	0.5	50	50	ENSMUST00000121200.9	ENSMUSG00000058056.17	Palld	chr8	protein_coding	palladin, cytoskeletal associated protein
chr8	61991857	62137769	-	61991857;62003279	62002605;62137769	ES	0.5	50	50	ENSMUST00000121493.9	ENSMUSG00000058056.17	Palld	chr8	protein_coding	palladin, cytoskeletal associated protein
chr8	62173728	62329947	-	62173728	62212845	5pMXE	0.5	50	50	ENSMUST00000121493.9	ENSMUSG00000058056.17	Palld	chr8	protein_coding	palladin, cytoskeletal associated protein
chr8	61991857;62003279	62003200;62137769	-	61991857	62137769	cassetteExon	0.5	100	100	ENSMUST00000034057.14	ENSMUSG00000058056.17	Palld	chr8	protein_coding	palladin, cytoskeletal associated protein
chr8	61991857	62002605	-	61991857	62137769	A5SS	0.33	50	50	ENSMUST00000034057.14	ENSMUSG00000058056.17	Palld	chr8	protein_coding	palladin, cytoskeletal associated protein
chr8	62366211	62374605	+	62304585	62374605	A5SS	0.5	50	50	ENSMUST00000133752.2	ENSMUSG00000086866.3	4930512H18Rik	chr8	lncRNA	RIKEN cDNA 4930512H18 gene
chr8	62375104	62380799	-	62375104	62378733	A5SS&ES	0.5	50	50	ENSMUST00000210693.2	ENSMUSG00000109729.2	Gm45418	chr8	lncRNA	predicted gene 45418
chr8	62381310	62393033	+	62381310;62382128	62382023;62393033	ES	0.33	50	50	ENSMUST00000154398.8	ENSMUSG00000037921.16	Ddx60	chr8	protein_coding	DExD/H box helicase 60
chr8	62381310;62390908	62390805;62393033	+	62381310;62382128	62382023;62393033	MXE	0.5	100	100	ENSMUST00000154398.8	ENSMUSG00000037921.16	Ddx60	chr8	protein_coding	DExD/H box helicase 60
chr8	62415383	62416618	+	62411710	62416618	A5SS	0.5	50	50	ENSMUST00000154398.8	ENSMUSG00000037921.16	Ddx60	chr8	protein_coding	DExD/H box helicase 60
chr8	62381310	62393033	+	62381310;62390908	62390805;62393033	ES	0.33	50	50	ENSMUST00000156980.8	ENSMUSG00000037921.16	Ddx60	chr8	protein_coding	DExD/H box helicase 60
chr8	62517491	62529296	-	62517491	62527579	A5SS&ES	0.5	50	50	ENSMUST00000034052.14	ENSMUSG00000031635.15	Anxa10	chr8	protein_coding	annexin A10
chr8	63405022;63566476	63566468;63566577	+	63405022	63566577	cassetteExon	0.5	100	100	ENSMUST00000117377.8	ENSMUSG00000054162.16	Spock3	chr8	protein_coding	sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3
chr8	63405022	63420043	+	63405022	63566577	A3SS	0.33	50	50	ENSMUST00000117377.8	ENSMUSG00000054162.16	Spock3	chr8	protein_coding	sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3
chr8	63404562	63404834	+	63404335	63404834	A5SS	0.5	50	50	ENSMUST00000117377.8	ENSMUSG00000054162.16	Spock3	chr8	protein_coding	sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3
chr8	63405022	63420043	+	63405022	63566468	A3SS	0.33	50	50	ENSMUST00000118003.8	ENSMUSG00000054162.16	Spock3	chr8	protein_coding	sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3
chr8	64160957	64192484	-	64162401	64192484	A3SS&ES	0.5	50	50	ENSMUST00000211745.2	ENSMUSG00000109825.2	Gm45589	chr8	lncRNA	predicted gene 45589
chr8	64154639	64157545	-	64154639	64162249	A5SS	0.5	50	50	ENSMUST00000211745.2	ENSMUSG00000109825.2	Gm45589	chr8	lncRNA	predicted gene 45589
chr8	64154639;64162401	64162249;64192484	-	64154639;64160957	64157545;64192484	MXE	0.5	100	100	ENSMUST00000209366.2	ENSMUSG00000109825.2	Gm45589	chr8	lncRNA	predicted gene 45589
chr8	65048049	65049673	-	65048049	65050494	A5SS	0.5	50	50	ENSMUST00000048967.9	ENSMUSG00000037852.9	Cpe	chr8	protein_coding	carboxypeptidase E
chr8	65072581	65073453	-	65072581	65145677	A5SS	0.33	50	50	ENSMUST00000048967.9	ENSMUSG00000037852.9	Cpe	chr8	protein_coding	carboxypeptidase E
chr8	65072581	65074646	-	65072581	65145677	A5SS	0.33	50	50	ENSMUST00000048967.9	ENSMUSG00000037852.9	Cpe	chr8	protein_coding	carboxypeptidase E
chr8	65072581	65074646	-	65072581	65073453	5pMXE	0.33	50	50	ENSMUST00000210680.2	ENSMUSG00000037852.9	Cpe	chr8	protein_coding	carboxypeptidase E
chr8	65180942;65182669	65182628;65186542	-	65180942	65186542	cassetteExon	0.5	100	100	ENSMUST00000034015.11	ENSMUSG00000031604.11	Msmo1	chr8	protein_coding	methylsterol monoxygenase 1
chr8	65173557	65175498	-	65173530	65175498	A3SS	0.5	50	50	ENSMUST00000034015.11	ENSMUSG00000031604.11	Msmo1	chr8	protein_coding	methylsterol monoxygenase 1
chr8	65173530	65174863	-	65173530	65175498	A5SS	0.5	50	50	ENSMUST00000034015.11	ENSMUSG00000031604.11	Msmo1	chr8	protein_coding	methylsterol monoxygenase 1
chr8	65180942	65183806	-	65180942	65186542	A5SS	0.33	50	50	ENSMUST00000034015.11	ENSMUSG00000031604.11	Msmo1	chr8	protein_coding	methylsterol monoxygenase 1
chr8	65180942	65186542	-	65175624	65186542	A3SS	0.33	50	50	ENSMUST00000145216.8	ENSMUSG00000031604.11	Msmo1	chr8	protein_coding	methylsterol monoxygenase 1
chr8	65182669	65186542	-	65175624	65186542	A3SS	0.33	50	50	ENSMUST00000145216.8	ENSMUSG00000031604.11	Msmo1	chr8	protein_coding	methylsterol monoxygenase 1
chr8	65175624	65176622	-	65175624	65186542	A5SS	0.5	50	50	ENSMUST00000145216.8	ENSMUSG00000031604.11	Msmo1	chr8	protein_coding	methylsterol monoxygenase 1
chr8	65180942	65182628	-	65180942	65183806	A5SS	0.33	50	50	ENSMUST00000147419.2	ENSMUSG00000031604.11	Msmo1	chr8	protein_coding	methylsterol monoxygenase 1
chr8	65232894	65251395	-	65232894	65264332	A5SS	0.5	50	50	ENSMUST00000034017.9	ENSMUSG00000031605.9	Klhl2	chr8	protein_coding	kelch-like 2, Mayven
chr8	65287220	65294797	-	65287220	65302285	A5SS	0.5	50	50	ENSMUST00000034017.9	ENSMUSG00000031605.9	Klhl2	chr8	protein_coding	kelch-like 2, Mayven
chr8	65412261	65418191	+	65412261;65416984	65416850;65418191	ES	0.33	50	50	ENSMUST00000026595.13	ENSMUSG00000025521.16	Tmem192	chr8	protein_coding	transmembrane protein 192
chr8	65409184	65412061	+	65409184	65411997	A3SS	0.5	50	50	ENSMUST00000026595.13	ENSMUSG00000025521.16	Tmem192	chr8	protein_coding	transmembrane protein 192
chr8	65418293	65418945	+	65418293	65421363	A3SS	0.5	50	50	ENSMUST00000026595.13	ENSMUSG00000025521.16	Tmem192	chr8	protein_coding	transmembrane protein 192
chr8	65417184	65418191	+	65416984	65418191	A5SS	0.33	50	50	ENSMUST00000026595.13	ENSMUSG00000025521.16	Tmem192	chr8	protein_coding	transmembrane protein 192
chr8	65412261;65417184	65416850;65418191	+	65412261	65418191	cassetteExon	0.5	100	100	ENSMUST00000079896.9	ENSMUSG00000025521.16	Tmem192	chr8	protein_coding	transmembrane protein 192
chr8	65436754	65440217	-	65436754	65440245	A5SS	0.5	50	50	ENSMUST00000095295.3	ENSMUSG00000071089.4	Trim75	chr8	protein_coding	tripartite motif-containing 75
chr8	65467552	65471110	-	65454501	65471110	A3SS	0.5	50	50	ENSMUST00000048565.9	ENSMUSG00000053490.9	Trim60	chr8	protein_coding	tripartite motif-containing 60
chr8	65467552	65488317	-	65467552	65471110	5pMXE	0.5	50	50	ENSMUST00000078409.5	ENSMUSG00000109718.2	Trim61	chr8	protein_coding	tripartite motif-containing 61
chr8	65481643	65488317	-	65467552	65488317	A3SS	0.5	50	50	ENSMUST00000148141.3	ENSMUSG00000109805.2	Gm45886	chr8	lncRNA	predicted gene 45886
chr8	66332058	66574403	+	66332058;66419907	66419699;66574403	ES	0.5	50	50	ENSMUST00000152320.8	ENSMUSG00000036469.17	Marchf1	chr8	protein_coding	membrane associated ring-CH-type finger 1
chr8	66419907	66729314	+	66419907;66574551	66574403;66729314	ES	0.5	50	50	ENSMUST00000152320.8	ENSMUSG00000036469.17	Marchf1	chr8	protein_coding	membrane associated ring-CH-type finger 1
chr8	66839171	66839461	+	66839171	66871468	A3SS	0.5	50	50	ENSMUST00000152320.8	ENSMUSG00000036469.17	Marchf1	chr8	protein_coding	membrane associated ring-CH-type finger 1
chr8	66071415	66331982	+	66070834	66331982	A5SS	0.5	50	50	ENSMUST00000152320.8	ENSMUSG00000036469.17	Marchf1	chr8	protein_coding	membrane associated ring-CH-type finger 1
chr8	66840213	66871468	+	66839171	66871468	A5SS	0.5	50	50	ENSMUST00000152320.8	ENSMUSG00000036469.17	Marchf1	chr8	protein_coding	membrane associated ring-CH-type finger 1
chr8	66908840	66920884	+	66908852	66920884	A5SS	0.5	50	50	ENSMUST00000152320.8	ENSMUSG00000036469.17	Marchf1	chr8	protein_coding	membrane associated ring-CH-type finger 1
chr8	66332058;66419907	66419699;66729314	+	66332058;66574551	66574403;66729314	MXE	0.5	100	100	ENSMUST00000110258.8	ENSMUSG00000036469.17	Marchf1	chr8	protein_coding	membrane associated ring-CH-type finger 1
chr8	66839171	66871468	+	66839171;66840213	66839461;66871468	ES	0.5	50	50	ENSMUST00000110256.8	ENSMUSG00000036469.17	Marchf1	chr8	protein_coding	membrane associated ring-CH-type finger 1
chr8	66332058	66574403	+	66332058	66419699	3pMXE	0.5	50	50	ENSMUST00000155804.8	ENSMUSG00000036469.17	Marchf1	chr8	protein_coding	membrane associated ring-CH-type finger 1
chr8	66419907	66729314	+	66574551	66729314	5pMXE	0.5	50	50	ENSMUST00000098708.11	ENSMUSG00000036469.17	Marchf1	chr8	protein_coding	membrane associated ring-CH-type finger 1
chr8	66935251	66936710	-	66935195	66936710	A3SS	0.5	50	50	ENSMUST00000026681.7	ENSMUSG00000025591.7	Tma16	chr8	protein_coding	translation machinery associated 16
chr8	67134800;67140147	67140025;67140617	-	67134800	67140617	cassetteExon	0.5	100	100	ENSMUST00000070810.8	ENSMUSG00000044014.10	Npy5r	chr8	protein_coding	neuropeptide Y receptor Y5
chr8	67134800	67140533	-	67134800	67140617	A5SS	0.33	50	50	ENSMUST00000070810.8	ENSMUSG00000044014.10	Npy5r	chr8	protein_coding	neuropeptide Y receptor Y5
chr8	67134800	67140025	-	67134800	67140533	A5SS	0.33	50	50	ENSMUST00000212563.2	ENSMUSG00000044014.10	Npy5r	chr8	protein_coding	neuropeptide Y receptor Y5
chr8	67150174	67152020	+	67150174	67156435	A3SS	0.5	50	50	ENSMUST00000039303.7	ENSMUSG00000036437.7	Npy1r	chr8	protein_coding	neuropeptide Y receptor Y1
chr8	67154188	67156435	+	67150174	67156435	A5SS	0.5	50	50	ENSMUST00000039303.7	ENSMUSG00000036437.7	Npy1r	chr8	protein_coding	neuropeptide Y receptor Y1
chr8	67317352;67324910	67324807;67332251	+	67317352;67330412	67330319;67332251	MXE	0.5	100	100	ENSMUST00000118009.2	ENSMUSG00000014907.11	Naf1	chr8	protein_coding	nuclear assembly factor 1 ribonucleoprotein
chr8	67947725	67953886	+	67947554	67953886	A5SS	0.5	50	50	ENSMUST00000093470.7	ENSMUSG00000051147.11	Nat2	chr8	protein_coding	N-acetyltransferase 2 (arylamine N-acetyltransferase)
chr8	68417006	68453369	-	68417006	68426785	5pMXE	0.5	50	50	ENSMUST00000098696.10	ENSMUSG00000030465.20	Psd3	chr8	protein_coding	pleckstrin and Sec7 domain containing 3
chr8	68166011	68166335	-	68149839	68166335	A3SS	0.5	50	50	ENSMUST00000098696.10	ENSMUSG00000030465.20	Psd3	chr8	protein_coding	pleckstrin and Sec7 domain containing 3
chr8	68310003	68335633	-	68243593	68335633	A3SS	0.33	50	50	ENSMUST00000098696.10	ENSMUSG00000030465.20	Psd3	chr8	protein_coding	pleckstrin and Sec7 domain containing 3
chr8	68331264	68335633	-	68243593	68335633	A3SS	0.33	50	50	ENSMUST00000098696.10	ENSMUSG00000030465.20	Psd3	chr8	protein_coding	pleckstrin and Sec7 domain containing 3
chr8	68358948	68361138	-	68359023	68361138	A3SS	0.5	50	50	ENSMUST00000098696.10	ENSMUSG00000030465.20	Psd3	chr8	protein_coding	pleckstrin and Sec7 domain containing 3
chr8	68361538	68413039	-	68361541	68413039	A3SS	0.5	50	50	ENSMUST00000098696.10	ENSMUSG00000030465.20	Psd3	chr8	protein_coding	pleckstrin and Sec7 domain containing 3
chr8	68243593	68270600	-	68243593	68335633	A5SS	0.5	50	50	ENSMUST00000098696.10	ENSMUSG00000030465.20	Psd3	chr8	protein_coding	pleckstrin and Sec7 domain containing 3
chr8	68361541	68363459	-	68361541	68413039	A5SS	0.33	50	50	ENSMUST00000098696.10	ENSMUSG00000030465.20	Psd3	chr8	protein_coding	pleckstrin and Sec7 domain containing 3
chr8	68361541	68404337	-	68361541	68413039	A5SS	0.33	50	50	ENSMUST00000098696.10	ENSMUSG00000030465.20	Psd3	chr8	protein_coding	pleckstrin and Sec7 domain containing 3
chr8	68335722	68354460	-	68335722	68356763	A5SS	0.33	50	50	ENSMUST00000038959.16	ENSMUSG00000030465.20	Psd3	chr8	protein_coding	pleckstrin and Sec7 domain containing 3
chr8	68335722	68356769	-	68335722	68356763	A5SS	0.33	50	50	ENSMUST00000038959.16	ENSMUSG00000030465.20	Psd3	chr8	protein_coding	pleckstrin and Sec7 domain containing 3
chr8	68335722	68356769	-	68335722;68354462	68354460;68356769	ES	0.5	50	50	ENSMUST00000093469.11	ENSMUSG00000030465.20	Psd3	chr8	protein_coding	pleckstrin and Sec7 domain containing 3
chr8	68361541	68404337	-	68361541	68363459	5pMXE	0.33	50	50	ENSMUST00000093468.12	ENSMUSG00000030465.20	Psd3	chr8	protein_coding	pleckstrin and Sec7 domain containing 3
chr8	68453477	68573400	-	68453477	68514796	5pMXE	0.5	50	50	ENSMUST00000212505.2	ENSMUSG00000030465.20	Psd3	chr8	protein_coding	pleckstrin and Sec7 domain containing 3
chr8	68552212	68573400	-	68453477	68573400	A3SS	0.33	50	50	ENSMUST00000212960.2	ENSMUSG00000030465.20	Psd3	chr8	protein_coding	pleckstrin and Sec7 domain containing 3
chr8	68573050	68573400	-	68453477	68573400	A3SS	0.33	50	50	ENSMUST00000212960.2	ENSMUSG00000030465.20	Psd3	chr8	protein_coding	pleckstrin and Sec7 domain containing 3
chr8	68331264	68335633	-	68310003	68335633	A3SS	0.5	50	50	ENSMUST00000130307.3	ENSMUSG00000030465.20	Psd3	chr8	protein_coding	pleckstrin and Sec7 domain containing 3
chr8	68573050	68573400	-	68552212	68573400	A3SS	0.33	50	50	ENSMUST00000185416.3	ENSMUSG00000030465.20	Psd3	chr8	protein_coding	pleckstrin and Sec7 domain containing 3
chr8	68798825	68799849	+	68798825	68799306	A3SS	0.5	50	50	ENSMUST00000066594.4	ENSMUSG00000053886.5	Sh2d4a	chr8	protein_coding	SH2 domain containing 4A
chr8	69009772;69041076	69041006;69098451	-	69009772	69098451	cassetteExon	0.5	100	100	ENSMUST00000078350.13	ENSMUSG00000036356.16	Csgalnact1	chr8	protein_coding	chondroitin sulfate N-acetylgalactosaminyltransferase 1
chr8	69098587;69104693	69104575;69187678	-	69098587	69187678	cassetteExon	0.5	100	100	ENSMUST00000078350.13	ENSMUSG00000036356.16	Csgalnact1	chr8	protein_coding	chondroitin sulfate N-acetylgalactosaminyltransferase 1
chr8	69098587;69171809	69171506;69187678	-	69098587	69187678	cassetteExon	0.5	100	100	ENSMUST00000078350.13	ENSMUSG00000036356.16	Csgalnact1	chr8	protein_coding	chondroitin sulfate N-acetylgalactosaminyltransferase 1
chr8	69172146	69187678	-	69098587	69187678	A3SS	0.2	50	50	ENSMUST00000078350.13	ENSMUSG00000036356.16	Csgalnact1	chr8	protein_coding	chondroitin sulfate N-acetylgalactosaminyltransferase 1
chr8	68914503	68982221	-	68914503	69009624	A5SS	0.33	50	50	ENSMUST00000078350.13	ENSMUSG00000036356.16	Csgalnact1	chr8	protein_coding	chondroitin sulfate N-acetylgalactosaminyltransferase 1
chr8	69098587;69104693	69104575;69187678	-	69098587;69171809	69171506;69187678	MXE	0.5	100	100	ENSMUST00000130214.8	ENSMUSG00000036356.16	Csgalnact1	chr8	protein_coding	chondroitin sulfate N-acetylgalactosaminyltransferase 1
chr8	69172146	69187678	-	69171809	69187678	A3SS	0.2	50	50	ENSMUST00000130214.8	ENSMUSG00000036356.16	Csgalnact1	chr8	protein_coding	chondroitin sulfate N-acetylgalactosaminyltransferase 1
chr8	69098587	69187678	-	69098587;69172146	69171506;69187678	ES	0.2	50	50	ENSMUST00000136060.8	ENSMUSG00000036356.16	Csgalnact1	chr8	protein_coding	chondroitin sulfate N-acetylgalactosaminyltransferase 1
chr8	69098587;69104693	69104575;69187678	-	69098587;69172146	69171506;69187678	MXE	0.5	100	100	ENSMUST00000136060.8	ENSMUSG00000036356.16	Csgalnact1	chr8	protein_coding	chondroitin sulfate N-acetylgalactosaminyltransferase 1
chr8	69098587	69187678	-	68914503	69187678	A3SS	0.2	50	50	ENSMUST00000143586.8	ENSMUSG00000036356.16	Csgalnact1	chr8	protein_coding	chondroitin sulfate N-acetylgalactosaminyltransferase 1
chr8	69104693	69187678	-	68914503	69187678	A3SS	0.2	50	50	ENSMUST00000143586.8	ENSMUSG00000036356.16	Csgalnact1	chr8	protein_coding	chondroitin sulfate N-acetylgalactosaminyltransferase 1
chr8	69171809	69187678	-	68914503	69187678	A3SS	0.2	50	50	ENSMUST00000143586.8	ENSMUSG00000036356.16	Csgalnact1	chr8	protein_coding	chondroitin sulfate N-acetylgalactosaminyltransferase 1
chr8	69172146	69187678	-	68914503	69187678	A3SS	0.2	50	50	ENSMUST00000143586.8	ENSMUSG00000036356.16	Csgalnact1	chr8	protein_coding	chondroitin sulfate N-acetylgalactosaminyltransferase 1
chr8	68914503	68982221	-	68914503	69187678	A5SS	0.33	50	50	ENSMUST00000143586.8	ENSMUSG00000036356.16	Csgalnact1	chr8	protein_coding	chondroitin sulfate N-acetylgalactosaminyltransferase 1
chr8	68914503	69009624	-	68914503	69187678	A5SS	0.33	50	50	ENSMUST00000143586.8	ENSMUSG00000036356.16	Csgalnact1	chr8	protein_coding	chondroitin sulfate N-acetylgalactosaminyltransferase 1
chr8	69172146	69187678	-	69104693	69187678	A3SS	0.25	50	50	ENSMUST00000139141.2	ENSMUSG00000036356.16	Csgalnact1	chr8	protein_coding	chondroitin sulfate N-acetylgalactosaminyltransferase 1
chr8	68821997	68824651	+	68821997	68824648	A3SS	0.5	50	50	ENSMUST00000124929.8	ENSMUSG00000085197.8	1700125H03Rik	chr8	lncRNA	RIKEN cDNA 1700125H03 gene
chr8	69274902;69276919	69276842;69279929	+	69274902	69279929	cassetteExon	0.5	100	100	ENSMUST00000034328.13	ENSMUSG00000031864.17	Ints10	chr8	protein_coding	integrator complex subunit 10
chr8	69274902;69277781	69277704;69279929	+	69274902	69279929	cassetteExon	0.5	100	100	ENSMUST00000034328.13	ENSMUSG00000031864.17	Ints10	chr8	protein_coding	integrator complex subunit 10
chr8	69274902;69277781	69277704;69279929	+	69274902;69276919	69276842;69279929	MXE	0.5	100	100	ENSMUST00000110242.8	ENSMUSG00000031864.17	Ints10	chr8	protein_coding	integrator complex subunit 10
chr8	69276919;69277781	69277704;69279929	+	69276919	69279929	cassetteExon	0.5	100	100	ENSMUST00000110242.8	ENSMUSG00000031864.17	Ints10	chr8	protein_coding	integrator complex subunit 10
chr8	69274902;69276919	69276842;69277704	+	69274902	69277704	cassetteExon	0.5	100	100	ENSMUST00000070713.8	ENSMUSG00000031864.17	Ints10	chr8	protein_coding	integrator complex subunit 10
chr8	69344240	69345247	+	69340255	69345247	A5SS	0.5	50	50	ENSMUST00000015712.15	ENSMUSG00000015568.17	Lpl	chr8	protein_coding	lipoprotein lipase
chr8	69527957	69541633	-	69527957;69529915	69529841;69541633	ES	0.33	50	50	ENSMUST00000037478.13	ENSMUSG00000036330.13	Slc18a1	chr8	protein_coding	solute carrier family 18 (vesicular monoamine), member 1
chr8	69529915;69540923	69540846;69541633	-	69529915	69541633	cassetteExon	0.5	100	100	ENSMUST00000037478.13	ENSMUSG00000036330.13	Slc18a1	chr8	protein_coding	solute carrier family 18 (vesicular monoamine), member 1
chr8	69527957	69541633	-	69527957	69529841	5pMXE	0.5	50	50	ENSMUST00000142548.8	ENSMUSG00000036330.13	Slc18a1	chr8	protein_coding	solute carrier family 18 (vesicular monoamine), member 1
chr8	69540923	69541633	-	69527957	69541633	A3SS	0.33	50	50	ENSMUST00000142710.2	ENSMUSG00000036330.13	Slc18a1	chr8	protein_coding	solute carrier family 18 (vesicular monoamine), member 1
chr8	69619938	69636626	-	69593738	69636626	A3SS	0.33	50	50	ENSMUST00000185176.8	ENSMUSG00000036306.14	Lzts1	chr8	protein_coding	leucine zipper, putative tumor suppressor 1
chr8	69634983	69636626	-	69593738	69636626	A3SS	0.33	50	50	ENSMUST00000185176.8	ENSMUSG00000036306.14	Lzts1	chr8	protein_coding	leucine zipper, putative tumor suppressor 1
chr8	69634983	69636626	-	69619938	69636626	A3SS	0.33	50	50	ENSMUST00000181890.2	ENSMUSG00000036306.14	Lzts1	chr8	protein_coding	leucine zipper, putative tumor suppressor 1
chr8	69679121	69680495	+	69679121;69679381	69679324;69680495	ES	0.5	50	50	ENSMUST00000212681.2	ENSMUSG00000059897.6	Zfp930	chr8	protein_coding	zinc finger protein 930
chr8	69743974	69744282	+	69743974	69759832	A3SS	0.5	50	50	ENSMUST00000212443.2	ENSMUSG00000079038.4	D130040H23Rik	chr8	protein_coding	RIKEN cDNA D130040H23 gene
chr8	69828084;69829247	69829138;69848093	-	69828084	69848093	cassetteExon	0.5	100	100	ENSMUST00000072427.7	ENSMUSG00000110444.3	Gm10033	chr8	protein_coding	predicted gene 10033
chr8	69835050	69848093	-	69828084	69848093	A3SS	0.33	50	50	ENSMUST00000072427.7	ENSMUSG00000110444.3	Gm10033	chr8	protein_coding	predicted gene 10033
chr8	69828084	69847985	-	69828084	69848093	A5SS	0.33	50	50	ENSMUST00000072427.7	ENSMUSG00000110444.3	Gm10033	chr8	protein_coding	predicted gene 10033
chr8	69835050	69848093	-	69829247	69848093	A3SS	0.33	50	50	ENSMUST00000213012.2	ENSMUSG00000110444.3	Gm10033	chr8	protein_coding	predicted gene 10033
chr8	69828084	69847985	-	69828084	69829138	A5SS&ES	0.33	50	50	ENSMUST00000213012.2	ENSMUSG00000110444.3	Gm10033	chr8	protein_coding	predicted gene 10033
chr8	70160344	70160989	-	70160344;70160821	70160761;70160989	ES	0.5	50	50	ENSMUST00000238292.2	ENSMUSG00000054648.9	Zfp869	chr8	protein_coding	zinc finger protein 869
chr8	70163634	70169550	-	70163634	70168934	5pMXE	0.16	50	50	ENSMUST00000238292.2	ENSMUSG00000054648.9	Zfp869	chr8	protein_coding	zinc finger protein 869
chr8	70163634;70167059	70166952;70168934	-	70163634	70168934	cassetteExon	0.5	100	100	ENSMUST00000238292.2	ENSMUSG00000054648.9	Zfp869	chr8	protein_coding	zinc finger protein 869
chr8	70163625	70168934	-	70163634	70168934	A3SS	0.33	50	50	ENSMUST00000238292.2	ENSMUSG00000054648.9	Zfp869	chr8	protein_coding	zinc finger protein 869
chr8	70163634	70165927	-	70163634	70168934	A5SS	0.16	50	50	ENSMUST00000238292.2	ENSMUSG00000054648.9	Zfp869	chr8	protein_coding	zinc finger protein 869
chr8	70163634	70169035	-	70163634	70168934	A5SS	0.16	50	50	ENSMUST00000238292.2	ENSMUSG00000054648.9	Zfp869	chr8	protein_coding	zinc finger protein 869
chr8	70163634	70169418	-	70163634	70168934	A5SS	0.16	50	50	ENSMUST00000238292.2	ENSMUSG00000054648.9	Zfp869	chr8	protein_coding	zinc finger protein 869
chr8	70163634	70166952	-	70163634;70166015	70165927;70166952	ES	0.5	50	50	ENSMUST00000238657.2	ENSMUSG00000054648.9	Zfp869	chr8	protein_coding	zinc finger protein 869
chr8	70167059	70169550	-	70167059	70168934	5pMXE	0.33	50	50	ENSMUST00000238657.2	ENSMUSG00000054648.9	Zfp869	chr8	protein_coding	zinc finger protein 869
chr8	70163625	70168934	-	70167059	70168934	A3SS&ES	0.33	50	50	ENSMUST00000238657.2	ENSMUSG00000054648.9	Zfp869	chr8	protein_coding	zinc finger protein 869
chr8	70163634	70169035	-	70163634	70165927	A5SS&ES	0.2	50	50	ENSMUST00000238657.2	ENSMUSG00000054648.9	Zfp869	chr8	protein_coding	zinc finger protein 869
chr8	70163634	70169418	-	70163634	70165927	A5SS&ES	0.2	50	50	ENSMUST00000238657.2	ENSMUSG00000054648.9	Zfp869	chr8	protein_coding	zinc finger protein 869
chr8	70167059	70169418	-	70167059	70168934	A5SS	0.33	50	50	ENSMUST00000238657.2	ENSMUSG00000054648.9	Zfp869	chr8	protein_coding	zinc finger protein 869
chr8	70163634;70167059	70166952;70169418	-	70163634	70169418	cassetteExon	0.5	100	100	ENSMUST00000238418.2	ENSMUSG00000054648.9	Zfp869	chr8	protein_coding	zinc finger protein 869
chr8	70163634	70169035	-	70163634	70169418	A5SS	0.16	50	50	ENSMUST00000238418.2	ENSMUSG00000054648.9	Zfp869	chr8	protein_coding	zinc finger protein 869
chr8	70163634	70169550	-	70163634	70169418	A5SS	0.16	50	50	ENSMUST00000238418.2	ENSMUSG00000054648.9	Zfp869	chr8	protein_coding	zinc finger protein 869
chr8	70163634	70169550	-	70163634;70167059	70166952;70169550	ES	0.5	50	50	ENSMUST00000238753.2	ENSMUSG00000054648.9	Zfp869	chr8	protein_coding	zinc finger protein 869
chr8	70163634	70168934	-	70163634	70166952	A5SS&ES	0.16	50	50	ENSMUST00000238753.2	ENSMUSG00000054648.9	Zfp869	chr8	protein_coding	zinc finger protein 869
chr8	70163634	70169035	-	70163634	70166952	A5SS&ES	0.16	50	50	ENSMUST00000238753.2	ENSMUSG00000054648.9	Zfp869	chr8	protein_coding	zinc finger protein 869
chr8	70163634	70169418	-	70163634	70166952	A5SS&ES	0.16	50	50	ENSMUST00000238753.2	ENSMUSG00000054648.9	Zfp869	chr8	protein_coding	zinc finger protein 869
chr8	70167059	70169418	-	70167059	70169550	A5SS	0.33	50	50	ENSMUST00000238753.2	ENSMUSG00000054648.9	Zfp869	chr8	protein_coding	zinc finger protein 869
chr8	70163634	70169550	-	70163634	70169035	5pMXE	0.16	50	50	ENSMUST00000238460.2	ENSMUSG00000054648.9	Zfp869	chr8	protein_coding	zinc finger protein 869
chr8	70160344	70160989	-	70160821	70160989	3pMXE	0.5	50	50	ENSMUST00000238761.2	ENSMUSG00000054648.9	Zfp869	chr8	protein_coding	zinc finger protein 869
chr8	70163634	70165927	-	70163634	70169550	A5SS	0.16	50	50	ENSMUST00000238311.2	ENSMUSG00000054648.9	Zfp869	chr8	protein_coding	zinc finger protein 869
chr8	70197237	70219292	-	70197237	70202482	5pMXE	0.5	50	50	ENSMUST00000130458.8	ENSMUSG00000092260.8	Zfp963	chr8	protein_coding	zinc finger protein 963
chr8	70195919	70196842	-	70196260	70196842	A3SS	0.5	50	50	ENSMUST00000130458.8	ENSMUSG00000092260.8	Zfp963	chr8	protein_coding	zinc finger protein 963
chr8	70195919	70197111	-	70196902	70197111	A3SS&ES	0.5	50	50	ENSMUST00000130458.8	ENSMUSG00000092260.8	Zfp963	chr8	protein_coding	zinc finger protein 963
chr8	70195919	70197111	-	70195919;70196902	70196842;70197111	ES	0.5	50	50	ENSMUST00000154063.2	ENSMUSG00000092260.8	Zfp963	chr8	protein_coding	zinc finger protein 963
chr8	70221897	70231153	-	70221897	70227440	5pMXE	0.5	50	50	ENSMUST00000149782.8	ENSMUSG00000092544.9	Gm20422	chr8	protein_coding	predicted gene 20422
chr8	70216145	70219292	-	70197237	70219292	A3SS	0.5	50	50	ENSMUST00000149782.8	ENSMUSG00000092544.9	Gm20422	chr8	protein_coding	predicted gene 20422
chr8	70249801	70250357	+	70249801;70249981	70249875;70250357	ES	0.5	50	50	ENSMUST00000034326.7	ENSMUSG00000031862.12	Atp13a1	chr8	protein_coding	ATPase type 13A1
chr8	70252128	70252482	+	70252128	70252412	A3SS	0.5	50	50	ENSMUST00000034326.7	ENSMUSG00000031862.12	Atp13a1	chr8	protein_coding	ATPase type 13A1
chr8	70256309	70256407	+	70256309	70256390	A3SS	0.5	50	50	ENSMUST00000034326.7	ENSMUSG00000031862.12	Atp13a1	chr8	protein_coding	ATPase type 13A1
chr8	70249801	70250357	+	70249981	70250357	A5SS	0.5	50	50	ENSMUST00000238710.2	ENSMUSG00000031862.12	Atp13a1	chr8	protein_coding	ATPase type 13A1
chr8	70270760	70273247	+	70270760;70273150	70273084;70273247	ES	0.5	50	50	ENSMUST00000036074.15	ENSMUSG00000036246.15	Gmip	chr8	protein_coding	Gem-interacting protein
chr8	70267241	70268094	+	70267241	70268084	A3SS	0.5	50	50	ENSMUST00000036074.15	ENSMUSG00000036246.15	Gmip	chr8	protein_coding	Gem-interacting protein
chr8	70270760	70271456	+	70270760	70273084	A3SS	0.33	50	50	ENSMUST00000036074.15	ENSMUSG00000036246.15	Gmip	chr8	protein_coding	Gem-interacting protein
chr8	70270760	70273247	+	70270760	70271456	3pMXE	0.33	50	50	ENSMUST00000142659.2	ENSMUSG00000036246.15	Gmip	chr8	protein_coding	Gem-interacting protein
chr8	70311803	70317474	+	70311803;70317200	70316962;70317474	ES	0.5	50	50	ENSMUST00000081503.13	ENSMUSG00000031860.18	Pbx4	chr8	protein_coding	pre B cell leukemia homeobox 4
chr8	70319253	70323228	+	70319253;70322832	70322679;70323228	ES	0.33	50	50	ENSMUST00000081503.13	ENSMUSG00000031860.18	Pbx4	chr8	protein_coding	pre B cell leukemia homeobox 4
chr8	70311803	70317548	+	70311803	70316962	A3SS&ES	0.16	50	50	ENSMUST00000081503.13	ENSMUSG00000031860.18	Pbx4	chr8	protein_coding	pre B cell leukemia homeobox 4
chr8	70300741	70311730	+	70285501	70311730	A5SS	0.5	50	50	ENSMUST00000081503.13	ENSMUSG00000031860.18	Pbx4	chr8	protein_coding	pre B cell leukemia homeobox 4
chr8	70311803	70319118	+	70311803;70317664	70317548;70319118	ES	0.5	50	50	ENSMUST00000156319.8	ENSMUSG00000031860.18	Pbx4	chr8	protein_coding	pre B cell leukemia homeobox 4
chr8	70311803	70317474	+	70311803	70317548	A3SS	0.16	50	50	ENSMUST00000156319.8	ENSMUSG00000031860.18	Pbx4	chr8	protein_coding	pre B cell leukemia homeobox 4
chr8	70311803;70319253	70319118;70323228	+	70311803	70323228	cassetteExon	0.5	100	100	ENSMUST00000131637.9	ENSMUSG00000031860.18	Pbx4	chr8	protein_coding	pre B cell leukemia homeobox 4
chr8	70311803;70322832	70322679;70323228	+	70311803	70323228	cassetteExon	0.5	100	100	ENSMUST00000131637.9	ENSMUSG00000031860.18	Pbx4	chr8	protein_coding	pre B cell leukemia homeobox 4
chr8	70311803	70316962	+	70311803	70323228	A3SS	0.16	50	50	ENSMUST00000131637.9	ENSMUSG00000031860.18	Pbx4	chr8	protein_coding	pre B cell leukemia homeobox 4
chr8	70311803	70317474	+	70311803	70323228	A3SS	0.16	50	50	ENSMUST00000131637.9	ENSMUSG00000031860.18	Pbx4	chr8	protein_coding	pre B cell leukemia homeobox 4
chr8	70311803	70317548	+	70311803	70323228	A3SS	0.16	50	50	ENSMUST00000131637.9	ENSMUSG00000031860.18	Pbx4	chr8	protein_coding	pre B cell leukemia homeobox 4
chr8	70311803;70319253	70319118;70322679	+	70311803	70322679	cassetteExon	0.5	100	100	ENSMUST00000132899.8	ENSMUSG00000031860.18	Pbx4	chr8	protein_coding	pre B cell leukemia homeobox 4
chr8	70311803;70319253	70319118;70323228	+	70311803;70322832	70322679;70323228	MXE	0.5	100	100	ENSMUST00000132899.8	ENSMUSG00000031860.18	Pbx4	chr8	protein_coding	pre B cell leukemia homeobox 4
chr8	70311803	70316962	+	70311803	70322679	A3SS	0.16	50	50	ENSMUST00000132899.8	ENSMUSG00000031860.18	Pbx4	chr8	protein_coding	pre B cell leukemia homeobox 4
chr8	70311803	70317474	+	70311803	70322679	A3SS	0.16	50	50	ENSMUST00000132899.8	ENSMUSG00000031860.18	Pbx4	chr8	protein_coding	pre B cell leukemia homeobox 4
chr8	70311803	70317548	+	70311803	70322679	A3SS	0.16	50	50	ENSMUST00000132899.8	ENSMUSG00000031860.18	Pbx4	chr8	protein_coding	pre B cell leukemia homeobox 4
chr8	70311803;70317664	70317474;70319118	+	70311803	70319118	cassetteExon	0.5	100	100	ENSMUST00000134777.10	ENSMUSG00000031860.18	Pbx4	chr8	protein_coding	pre B cell leukemia homeobox 4
chr8	70311803	70316962	+	70311803	70319118	A3SS	0.16	50	50	ENSMUST00000134777.10	ENSMUSG00000031860.18	Pbx4	chr8	protein_coding	pre B cell leukemia homeobox 4
chr8	70311803	70319118	+	70311803	70317474	3pMXE	0.16	50	50	ENSMUST00000132259.2	ENSMUSG00000031860.18	Pbx4	chr8	protein_coding	pre B cell leukemia homeobox 4
chr8	70311803	70322679	+	70319253	70322679	5pMXE	0.5	50	50	ENSMUST00000156251.2	ENSMUSG00000031860.18	Pbx4	chr8	protein_coding	pre B cell leukemia homeobox 4
chr8	70311803	70323228	+	70319253	70323228	5pMXE	0.33	50	50	ENSMUST00000135952.2	ENSMUSG00000031860.18	Pbx4	chr8	protein_coding	pre B cell leukemia homeobox 4
chr8	70340672	70340769	-	70340672	70341637	A5SS	0.33	50	50	ENSMUST00000152938.9	ENSMUSG00000048967.17	Yjefn3	chr8	protein_coding	YjeF N-terminal domain containing 3
chr8	70340672	70341050	-	70340672	70341637	A5SS	0.33	50	50	ENSMUST00000152938.9	ENSMUSG00000048967.17	Yjefn3	chr8	protein_coding	YjeF N-terminal domain containing 3
chr8	70340672	70340769	-	70340672	70341050	A5SS	0.33	50	50	ENSMUST00000180068.2	ENSMUSG00000048967.17	Yjefn3	chr8	protein_coding	YjeF N-terminal domain containing 3
chr8	70342203	70343516	-	70342203	70355348	A5SS	0.5	50	50	ENSMUST00000180068.2	ENSMUSG00000048967.17	Yjefn3	chr8	protein_coding	YjeF N-terminal domain containing 3
chr8	70364519	70364814	-	70364519	70365552	A5SS	0.5	50	50	ENSMUST00000177851.9	ENSMUSG00000036180.16	Gatad2a	chr8	protein_coding	GATA zinc finger domain containing 2A
chr8	70369098	70369219	-	70369098	70369210	A5SS	0.5	50	50	ENSMUST00000177851.9	ENSMUSG00000036180.16	Gatad2a	chr8	protein_coding	GATA zinc finger domain containing 2A
chr8	70388686	70389111	-	70388686	70403303	A5SS	0.5	50	50	ENSMUST00000177851.9	ENSMUSG00000036180.16	Gatad2a	chr8	protein_coding	GATA zinc finger domain containing 2A
chr8	70403404	70410950	-	70403404	70448593	A5SS	0.33	50	50	ENSMUST00000177851.9	ENSMUSG00000036180.16	Gatad2a	chr8	protein_coding	GATA zinc finger domain containing 2A
chr8	70403404	70426740	-	70403404	70448593	A5SS	0.33	50	50	ENSMUST00000177851.9	ENSMUSG00000036180.16	Gatad2a	chr8	protein_coding	GATA zinc finger domain containing 2A
chr8	70369098	70369219	-	70369101	70369219	A3SS	0.5	50	50	ENSMUST00000065169.12	ENSMUSG00000036180.16	Gatad2a	chr8	protein_coding	GATA zinc finger domain containing 2A
chr8	70403404	70410950	-	70403404	70426740	A5SS	0.33	50	50	ENSMUST00000116463.4	ENSMUSG00000036180.16	Gatad2a	chr8	protein_coding	GATA zinc finger domain containing 2A
chr8	70472303	70472397	-	70472310	70472397	A3SS	0.5	50	50	ENSMUST00000168013.3	ENSMUSG00000031858.17	Mau2	chr8	protein_coding	MAU2 sister chromatid cohesion factor
chr8	70475319	70476257	-	70475319	70476261	A5SS	0.33	50	50	ENSMUST00000168013.3	ENSMUSG00000031858.17	Mau2	chr8	protein_coding	MAU2 sister chromatid cohesion factor
chr8	70475319	70476264	-	70475319	70476261	A5SS	0.33	50	50	ENSMUST00000168013.3	ENSMUSG00000031858.17	Mau2	chr8	protein_coding	MAU2 sister chromatid cohesion factor
chr8	70485894	70486261	-	70485894	70491953	A5SS	0.5	50	50	ENSMUST00000168013.3	ENSMUSG00000031858.17	Mau2	chr8	protein_coding	MAU2 sister chromatid cohesion factor
chr8	70475319	70476257	-	70475319	70476264	A5SS	0.33	50	50	ENSMUST00000050561.13	ENSMUSG00000031858.17	Mau2	chr8	protein_coding	MAU2 sister chromatid cohesion factor
chr8	70530164	70530537	+	70530164	70530531	A3SS	0.5	50	50	ENSMUST00000110160.9	ENSMUSG00000036151.16	Tm6sf2	chr8	protein_coding	transmembrane 6 superfamily member 2
chr8	70530632	70530724	+	70530632	70530960	A3SS	0.5	50	50	ENSMUST00000110160.9	ENSMUSG00000036151.16	Tm6sf2	chr8	protein_coding	transmembrane 6 superfamily member 2
chr8	70536213	70537432	+	70536213;70537190	70537070;70537432	ES	0.5	50	50	ENSMUST00000007738.11	ENSMUSG00000007594.11	Hapln4	chr8	protein_coding	hyaluronan and proteoglycan link protein 4
chr8	70536213	70537432	+	70537190	70537432	5pMXE	0.5	50	50	ENSMUST00000213092.2	ENSMUSG00000007594.11	Hapln4	chr8	protein_coding	hyaluronan and proteoglycan link protein 4
chr8	70588041	70588186	-	70588041	70588216	A5SS	0.5	50	50	ENSMUST00000075724.9	ENSMUSG00000036120.11	Rfxank	chr8	protein_coding	regulatory factor X-associated ankyrin-containing protein
chr8	70584658;70585167	70585062;70585237	+	70584658	70585237	cassetteExon	0.5	100	100	ENSMUST00000211898.2	ENSMUSG00000071078.7	Nr2c2ap	chr8	protein_coding	nuclear receptor 2C2-associated protein
chr8	70595188;70597247	70597148;70597674	+	70595188	70597674	cassetteExon	0.5	100	100	ENSMUST00000002418.15	ENSMUSG00000002345.19	Borcs8	chr8	protein_coding	BLOC-1 related complex subunit 8
chr8	70593006	70594514	+	70592422	70594514	A5SS	0.5	50	50	ENSMUST00000002418.15	ENSMUSG00000002345.19	Borcs8	chr8	protein_coding	BLOC-1 related complex subunit 8
chr8	70619076	70619469	+	70619076;70619348	70619264;70619469	ES	0.33	50	50	ENSMUST00000163756.2	ENSMUSG00000079033.11	Mef2b	chr8	protein_coding	myocyte enhancer factor 2B
chr8	70592422	70594514	+	70592422	70616879	A3SS	0.5	50	50	ENSMUST00000163756.2	ENSMUSG00000079033.11	Mef2b	chr8	protein_coding	myocyte enhancer factor 2B
chr8	70605494	70616879	+	70592422	70616879	A5SS	0.5	50	50	ENSMUST00000163756.2	ENSMUSG00000079033.11	Mef2b	chr8	protein_coding	myocyte enhancer factor 2B
chr8	70619046	70619264	+	70619076	70619264	A5SS	0.5	50	50	ENSMUST00000163756.2	ENSMUSG00000079033.11	Mef2b	chr8	protein_coding	myocyte enhancer factor 2B
chr8	70619046	70619469	+	70619348	70619469	A5SS&ES	0.33	50	50	ENSMUST00000163756.2	ENSMUSG00000079033.11	Mef2b	chr8	protein_coding	myocyte enhancer factor 2B
chr8	70619046	70619469	+	70619046;70619348	70619264;70619469	ES	0.33	50	50	ENSMUST00000110143.8	ENSMUSG00000079033.11	Mef2b	chr8	protein_coding	myocyte enhancer factor 2B
chr8	70619076	70619469	+	70619348	70619469	A5SS&ES	0.33	50	50	ENSMUST00000110143.8	ENSMUSG00000079033.11	Mef2b	chr8	protein_coding	myocyte enhancer factor 2B
chr8	70619046	70619469	+	70619076	70619469	A5SS	0.33	50	50	ENSMUST00000110141.9	ENSMUSG00000079033.11	Mef2b	chr8	protein_coding	myocyte enhancer factor 2B
chr8	70625090;70627056	70626953;70633189	+	70625090	70633189	cassetteExon	0.5	100	100	ENSMUST00000125755.8	ENSMUSG00000002342.18	Tmem161a	chr8	protein_coding	transmembrane protein 161A
chr8	70625090;70629988	70629495;70633189	+	70625090	70633189	cassetteExon	0.5	100	100	ENSMUST00000125755.8	ENSMUSG00000002342.18	Tmem161a	chr8	protein_coding	transmembrane protein 161A
chr8	70631668	70633189	+	70625090	70633189	A5SS	0.2	50	50	ENSMUST00000125755.8	ENSMUSG00000002342.18	Tmem161a	chr8	protein_coding	transmembrane protein 161A
chr8	70631672	70633189	+	70625090	70633189	A5SS	0.2	50	50	ENSMUST00000125755.8	ENSMUSG00000002342.18	Tmem161a	chr8	protein_coding	transmembrane protein 161A
chr8	70625090;70629988	70629495;70633189	+	70625090;70627056	70626953;70633189	MXE	0.5	100	100	ENSMUST00000182715.8	ENSMUSG00000002342.18	Tmem161a	chr8	protein_coding	transmembrane protein 161A
chr8	70627056;70629988	70629495;70633189	+	70627056	70633189	cassetteExon	0.5	100	100	ENSMUST00000182715.8	ENSMUSG00000002342.18	Tmem161a	chr8	protein_coding	transmembrane protein 161A
chr8	70627056	70629457	+	70627056	70633189	A3SS	0.33	50	50	ENSMUST00000182715.8	ENSMUSG00000002342.18	Tmem161a	chr8	protein_coding	transmembrane protein 161A
chr8	70631668	70633189	+	70627056	70633189	A5SS	0.2	50	50	ENSMUST00000182715.8	ENSMUSG00000002342.18	Tmem161a	chr8	protein_coding	transmembrane protein 161A
chr8	70631672	70633189	+	70627056	70633189	A5SS	0.2	50	50	ENSMUST00000182715.8	ENSMUSG00000002342.18	Tmem161a	chr8	protein_coding	transmembrane protein 161A
chr8	70633518	70633799	+	70633699	70633799	A5SS&ES	0.5	50	50	ENSMUST00000182715.8	ENSMUSG00000002342.18	Tmem161a	chr8	protein_coding	transmembrane protein 161A
chr8	70625090	70629495	+	70625090;70627056	70626953;70629495	ES	0.5	50	50	ENSMUST00000002413.15	ENSMUSG00000002342.18	Tmem161a	chr8	protein_coding	transmembrane protein 161A
chr8	70629988	70631517	+	70629988;70630258	70630102;70631517	ES	0.5	50	50	ENSMUST00000002413.15	ENSMUSG00000002342.18	Tmem161a	chr8	protein_coding	transmembrane protein 161A
chr8	70627056	70629457	+	70627056	70629495	A3SS	0.33	50	50	ENSMUST00000002413.15	ENSMUSG00000002342.18	Tmem161a	chr8	protein_coding	transmembrane protein 161A
chr8	70629988	70630177	+	70629988	70630102	A3SS	0.25	50	50	ENSMUST00000002413.15	ENSMUSG00000002342.18	Tmem161a	chr8	protein_coding	transmembrane protein 161A
chr8	70631672	70633189	+	70631668	70633189	A5SS	0.2	50	50	ENSMUST00000002413.15	ENSMUSG00000002342.18	Tmem161a	chr8	protein_coding	transmembrane protein 161A
chr8	70625090;70627056	70626953;70633189	+	70625090;70631668	70629495;70633189	MXE	0.5	100	100	ENSMUST00000182980.8	ENSMUSG00000002342.18	Tmem161a	chr8	protein_coding	transmembrane protein 161A
chr8	70627056	70633189	+	70627056	70629495	3pMXE	0.33	50	50	ENSMUST00000133339.8	ENSMUSG00000002342.18	Tmem161a	chr8	protein_coding	transmembrane protein 161A
chr8	70625090	70629495	+	70625090	70626953	A3SS&ES	0.5	50	50	ENSMUST00000123923.2	ENSMUSG00000002342.18	Tmem161a	chr8	protein_coding	transmembrane protein 161A
chr8	70629988;70631668	70631517;70633189	+	70629988	70633189	cassetteExon	0.5	100	100	ENSMUST00000182365.8	ENSMUSG00000002342.18	Tmem161a	chr8	protein_coding	transmembrane protein 161A
chr8	70629988;70631672	70631517;70633189	+	70629988	70633189	cassetteExon	0.5	100	100	ENSMUST00000182365.8	ENSMUSG00000002342.18	Tmem161a	chr8	protein_coding	transmembrane protein 161A
chr8	70629988	70630102	+	70629988	70633189	A3SS	0.25	50	50	ENSMUST00000182365.8	ENSMUSG00000002342.18	Tmem161a	chr8	protein_coding	transmembrane protein 161A
chr8	70629988	70630177	+	70629988	70633189	A3SS	0.25	50	50	ENSMUST00000182365.8	ENSMUSG00000002342.18	Tmem161a	chr8	protein_coding	transmembrane protein 161A
chr8	70625090	70629495	+	70627056	70629495	5pMXE	0.5	50	50	ENSMUST00000149105.2	ENSMUSG00000002342.18	Tmem161a	chr8	protein_coding	transmembrane protein 161A
chr8	70629988	70631517	+	70629988;70630258	70630177;70631517	ES	0.5	50	50	ENSMUST00000149105.2	ENSMUSG00000002342.18	Tmem161a	chr8	protein_coding	transmembrane protein 161A
chr8	70629988	70633189	+	70629988	70631517	3pMXE	0.25	50	50	ENSMUST00000182942.2	ENSMUSG00000002342.18	Tmem161a	chr8	protein_coding	transmembrane protein 161A
chr8	70629988	70631517	+	70630258	70631517	5pMXE	0.5	50	50	ENSMUST00000125906.8	ENSMUSG00000002342.18	Tmem161a	chr8	protein_coding	transmembrane protein 161A
chr8	70629988	70633189	+	70631668	70633189	5pMXE	0.2	50	50	ENSMUST00000133084.8	ENSMUSG00000002342.18	Tmem161a	chr8	protein_coding	transmembrane protein 161A
chr8	70684056	70686596	-	70684056	70686760	A5SS	0.5	50	50	ENSMUST00000019679.12	ENSMUSG00000002343.12	Armc6	chr8	protein_coding	armadillo repeat containing 6
chr8	70689444;70695011	70694811;70695141	+	70689444	70695141	cassetteExon	0.5	100	100	ENSMUST00000164403.8	ENSMUSG00000036054.16	Sugp2	chr8	protein_coding	SURP and G patch domain containing 2
chr8	70696706	70701079	+	70696706	70701076	A3SS	0.5	50	50	ENSMUST00000164403.8	ENSMUSG00000036054.16	Sugp2	chr8	protein_coding	SURP and G patch domain containing 2
chr8	70689182	70689318	+	70687302	70689318	A5SS	0.5	50	50	ENSMUST00000164403.8	ENSMUSG00000036054.16	Sugp2	chr8	protein_coding	SURP and G patch domain containing 2
chr8	70713239	70715521	+	70713967	70715521	A5SS	0.5	50	50	ENSMUST00000131489.8	ENSMUSG00000036054.16	Sugp2	chr8	protein_coding	SURP and G patch domain containing 2
chr8	70713239;70713967	70713881;70715521	+	70713239	70715521	cassetteExon	0.5	100	100	ENSMUST00000093458.11	ENSMUSG00000036054.16	Sugp2	chr8	protein_coding	SURP and G patch domain containing 2
chr8	70706340	70709780	+	70706340	70731073	A3SS	0.5	50	50	ENSMUST00000148378.8	ENSMUSG00000036054.16	Sugp2	chr8	protein_coding	SURP and G patch domain containing 2
chr8	70726276	70731073	+	70706340	70731073	A5SS	0.5	50	50	ENSMUST00000148378.8	ENSMUSG00000036054.16	Sugp2	chr8	protein_coding	SURP and G patch domain containing 2
chr8	70738712	70742044	+	70738712	70738946	3pMXE	0.5	50	50	ENSMUST00000087467.12	ENSMUSG00000003573.16	Homer3	chr8	protein_coding	homer scaffolding protein 3
chr8	70744078	70744167	+	70744078	70744176	A3SS	0.5	50	50	ENSMUST00000140212.8	ENSMUSG00000003573.16	Homer3	chr8	protein_coding	homer scaffolding protein 3
chr8	70743813;70744253	70743968;70745625	+	70743813	70745625	cassetteExon	0.5	100	100	ENSMUST00000135368.2	ENSMUSG00000003573.16	Homer3	chr8	protein_coding	homer scaffolding protein 3
chr8	70747485	70748017	-	70747411	70748017	A3SS	0.5	50	50	ENSMUST00000008004.10	ENSMUSG00000057788.14	Ddx49	chr8	protein_coding	DEAD box helicase 49
chr8	70757346	70759149	+	70757346;70758385	70758285;70759149	ES	0.5	50	50	ENSMUST00000066469.14	ENSMUSG00000055681.15	Cope	chr8	protein_coding	coatomer protein complex, subunit epsilon
chr8	70759301	70761145	+	70759301;70760653	70760600;70761145	ES	0.5	50	50	ENSMUST00000066469.14	ENSMUSG00000055681.15	Cope	chr8	protein_coding	coatomer protein complex, subunit epsilon
chr8	70763141	70765356	+	70763141;70764346	70764278;70765356	ES	0.5	50	50	ENSMUST00000066469.14	ENSMUSG00000055681.15	Cope	chr8	protein_coding	coatomer protein complex, subunit epsilon
chr8	70757346	70759149	+	70757346	70758285	3pMXE	0.5	50	50	ENSMUST00000140363.2	ENSMUSG00000055681.15	Cope	chr8	protein_coding	coatomer protein complex, subunit epsilon
chr8	70757346	70759149	+	70758385	70759149	5pMXE	0.5	50	50	ENSMUST00000128003.8	ENSMUSG00000055681.15	Cope	chr8	protein_coding	coatomer protein complex, subunit epsilon
chr8	70771443	70774154	+	70771000	70774154	A5SS	0.5	50	50	ENSMUST00000165819.9	ENSMUSG00000087408.11	Cers1	chr8	protein_coding	ceramide synthase 1
chr8	70792491	70792632	-	70792491	70792665	A5SS	0.5	50	50	ENSMUST00000215817.2	ENSMUSG00000058301.9	Upf1	chr8	protein_coding	UPF1 regulator of nonsense transcripts homolog (yeast)
chr8	70827074	70828380	+	70827074;70827624	70827455;70828380	ES	0.33	50	50	ENSMUST00000003659.9	ENSMUSG00000031849.10	Comp	chr8	protein_coding	cartilage oligomeric matrix protein
chr8	70834067	70834536	+	70834067;70834461	70834322;70834536	ES	0.5	50	50	ENSMUST00000003659.9	ENSMUSG00000031849.10	Comp	chr8	protein_coding	cartilage oligomeric matrix protein
chr8	70828238	70828380	+	70827624	70828380	A5SS	0.33	50	50	ENSMUST00000003659.9	ENSMUSG00000031849.10	Comp	chr8	protein_coding	cartilage oligomeric matrix protein
chr8	70828238	70828380	+	70827074	70828380	A5SS	0.33	50	50	ENSMUST00000213072.2	ENSMUSG00000031849.10	Comp	chr8	protein_coding	cartilage oligomeric matrix protein
chr8	70861661	70883810	-	70861661	70892083	A5SS	0.5	50	50	ENSMUST00000076615.6	ENSMUSG00000003575.14	Crtc1	chr8	protein_coding	CREB regulated transcription coactivator 1
chr8	70905567	70908116	-	70905503	70908116	A3SS	0.33	50	50	ENSMUST00000209415.2	ENSMUSG00000055707.14	Klhl26	chr8	protein_coding	kelch-like 26
chr8	70905669	70908116	-	70905503	70908116	A3SS	0.33	50	50	ENSMUST00000209415.2	ENSMUSG00000055707.14	Klhl26	chr8	protein_coding	kelch-like 26
chr8	70905669	70929500	-	70908298	70929500	A3SS&ES	0.5	50	50	ENSMUST00000209415.2	ENSMUSG00000055707.14	Klhl26	chr8	protein_coding	kelch-like 26
chr8	70908298	70928457	-	70908298	70929500	A5SS	0.5	50	50	ENSMUST00000209415.2	ENSMUSG00000055707.14	Klhl26	chr8	protein_coding	kelch-like 26
chr8	70905669	70908116	-	70905567	70908116	A3SS	0.33	50	50	ENSMUST00000210250.2	ENSMUSG00000055707.14	Klhl26	chr8	protein_coding	kelch-like 26
chr8	70905669	70929500	-	70905669;70908298	70908116;70929500	ES	0.5	50	50	ENSMUST00000066597.13	ENSMUSG00000055707.14	Klhl26	chr8	protein_coding	kelch-like 26
chr8	70938004	70938325	-	70937832	70938325	A3SS	0.5	50	50	ENSMUST00000045286.9	ENSMUSG00000035964.9	Tmem59l	chr8	protein_coding	transmembrane protein 59-like
chr8	70946050	70951743	+	70946050;70951528	70951247;70951743	ES	0.5	50	50	ENSMUST00000008032.14	ENSMUSG00000007888.16	Crlf1	chr8	protein_coding	cytokine receptor-like factor 1
chr8	70956142	70956471	+	70956142;70956289	70956247;70956471	ES	0.5	50	50	ENSMUST00000008032.14	ENSMUSG00000007888.16	Crlf1	chr8	protein_coding	cytokine receptor-like factor 1
chr8	70957159	70958406	-	70957159;70957710	70957634;70958406	ES	0.5	50	50	ENSMUST00000135773.8	ENSMUSG00000058833.12	Rex1bd	chr8	protein_coding	required for excision 1-B domain containing
chr8	70957178	70957634	-	70957159	70957634	A3SS	0.5	50	50	ENSMUST00000135773.8	ENSMUSG00000058833.12	Rex1bd	chr8	protein_coding	required for excision 1-B domain containing
chr8	70958610	70958942	-	70958610	70959147	A5SS	0.5	50	50	ENSMUST00000135773.8	ENSMUSG00000058833.12	Rex1bd	chr8	protein_coding	required for excision 1-B domain containing
chr8	70957159	70958406	-	70957710	70958406	A3SS&ES	0.5	50	50	ENSMUST00000136913.2	ENSMUSG00000058833.12	Rex1bd	chr8	protein_coding	required for excision 1-B domain containing
chr8	70962284	70962768	-	70962281	70962768	A3SS	0.5	50	50	ENSMUST00000140679.8	ENSMUSG00000090137.9	Uba52	chr8	protein_coding	ubiquitin A-52 residue ribosomal protein fusion product 1
chr8	70962281	70962988	-	70962281	70962768	A5SS	0.5	50	50	ENSMUST00000140679.8	ENSMUSG00000090137.9	Uba52	chr8	protein_coding	ubiquitin A-52 residue ribosomal protein fusion product 1
chr8	70962284	70963334	-	70962284	70962768	5pMXE	0.25	50	50	ENSMUST00000129909.8	ENSMUSG00000090137.9	Uba52	chr8	protein_coding	ubiquitin A-52 residue ribosomal protein fusion product 1
chr8	70962284	70968045	-	70962284	70962768	5pMXE	0.25	50	50	ENSMUST00000129909.8	ENSMUSG00000090137.9	Uba52	chr8	protein_coding	ubiquitin A-52 residue ribosomal protein fusion product 1
chr8	70962284	70962988	-	70962284	70962768	A5SS	0.25	50	50	ENSMUST00000129909.8	ENSMUSG00000090137.9	Uba52	chr8	protein_coding	ubiquitin A-52 residue ribosomal protein fusion product 1
chr8	70962284	70963334	-	70962284	70962988	5pMXE	0.25	50	50	ENSMUST00000125184.8	ENSMUSG00000090137.9	Uba52	chr8	protein_coding	ubiquitin A-52 residue ribosomal protein fusion product 1
chr8	70962284	70968045	-	70962284	70962988	5pMXE	0.25	50	50	ENSMUST00000125184.8	ENSMUSG00000090137.9	Uba52	chr8	protein_coding	ubiquitin A-52 residue ribosomal protein fusion product 1
chr8	70962281	70962988	-	70962284	70962988	A3SS	0.5	50	50	ENSMUST00000125184.8	ENSMUSG00000090137.9	Uba52	chr8	protein_coding	ubiquitin A-52 residue ribosomal protein fusion product 1
chr8	70962284	70968045	-	70962284	70963334	5pMXE	0.25	50	50	ENSMUST00000135446.8	ENSMUSG00000090137.9	Uba52	chr8	protein_coding	ubiquitin A-52 residue ribosomal protein fusion product 1
chr8	70972711	70975828	-	70972711	70975713	5pMXE	0.25	50	50	ENSMUST00000121623.8	ENSMUSG00000055553.17	Kxd1	chr8	protein_coding	KxDL motif containing 1
chr8	70972711	70980295	-	70972711	70975713	5pMXE	0.25	50	50	ENSMUST00000121623.8	ENSMUSG00000055553.17	Kxd1	chr8	protein_coding	KxDL motif containing 1
chr8	70972711;70973208	70973138;70975713	-	70972711	70975713	cassetteExon	0.5	100	100	ENSMUST00000121623.8	ENSMUSG00000055553.17	Kxd1	chr8	protein_coding	KxDL motif containing 1
chr8	70966818	70968045	-	70962284	70968045	A3SS	0.33	50	50	ENSMUST00000121623.8	ENSMUSG00000055553.17	Kxd1	chr8	protein_coding	KxDL motif containing 1
chr8	70967398	70968045	-	70962284	70968045	A3SS	0.33	50	50	ENSMUST00000121623.8	ENSMUSG00000055553.17	Kxd1	chr8	protein_coding	KxDL motif containing 1
chr8	70971167	70972522	-	70971167	70972587	A5SS	0.5	50	50	ENSMUST00000121623.8	ENSMUSG00000055553.17	Kxd1	chr8	protein_coding	KxDL motif containing 1
chr8	70972711	70973138	-	70972711	70980295	A5SS	0.25	50	50	ENSMUST00000138260.8	ENSMUSG00000055553.17	Kxd1	chr8	protein_coding	KxDL motif containing 1
chr8	70972711	70975828	-	70972711	70980295	A5SS	0.25	50	50	ENSMUST00000138260.8	ENSMUSG00000055553.17	Kxd1	chr8	protein_coding	KxDL motif containing 1
chr8	70966818;70967398	70967245;70968045	-	70966818	70968045	cassetteExon	0.5	100	100	ENSMUST00000093456.12	ENSMUSG00000055553.17	Kxd1	chr8	protein_coding	KxDL motif containing 1
chr8	70972711	70973138	-	70972711	70975828	A5SS	0.25	50	50	ENSMUST00000118850.8	ENSMUSG00000055553.17	Kxd1	chr8	protein_coding	KxDL motif containing 1
chr8	70966818	70968045	-	70967398	70968045	3pMXE	0.33	50	50	ENSMUST00000117580.8	ENSMUSG00000055553.17	Kxd1	chr8	protein_coding	KxDL motif containing 1
chr8	70983923	70984172	+	70983923	70984175	A3SS	0.5	50	50	ENSMUST00000119353.9	ENSMUSG00000019428.17	Fkbp8	chr8	protein_coding	FK506 binding protein 8
chr8	70986844	70987038	+	70986844	70987133	A3SS	0.5	50	50	ENSMUST00000119353.9	ENSMUSG00000019428.17	Fkbp8	chr8	protein_coding	FK506 binding protein 8
chr8	70980685	70982041	+	70980486	70982041	A5SS	0.33	50	50	ENSMUST00000119353.9	ENSMUSG00000019428.17	Fkbp8	chr8	protein_coding	FK506 binding protein 8
chr8	70981916	70982041	+	70980486	70982041	A5SS	0.33	50	50	ENSMUST00000119353.9	ENSMUSG00000019428.17	Fkbp8	chr8	protein_coding	FK506 binding protein 8
chr8	70981916	70982041	+	70980685	70982041	A5SS	0.33	50	50	ENSMUST00000119698.8	ENSMUSG00000019428.17	Fkbp8	chr8	protein_coding	FK506 binding protein 8
chr8	70992491	71025513	+	70992142	71025513	A5SS	0.5	50	50	ENSMUST00000210155.2	ENSMUSG00000070002.8	Ell	chr8	protein_coding	elongation factor RNA polymerase II
chr8	71047634	71048355	+	71047634	71047789	3pMXE	0.5	50	50	ENSMUST00000211117.2	ENSMUSG00000019139.11	Isyna1	chr8	protein_coding	myo-inositol 1-phosphate synthase A1
chr8	71047193;71047398	71047270;71047473	+	71047193	71047473	cassetteExon	0.5	100	100	ENSMUST00000211117.2	ENSMUSG00000019139.11	Isyna1	chr8	protein_coding	myo-inositol 1-phosphate synthase A1
chr8	71047193	71047473	+	71047193	71047270	A3SS	0.5	50	50	ENSMUST00000210358.2	ENSMUSG00000019139.11	Isyna1	chr8	protein_coding	myo-inositol 1-phosphate synthase A1
chr8	71047634	71048355	+	71047634;71047921	71047789;71048355	ES	0.33	50	50	ENSMUST00000209285.2	ENSMUSG00000019139.11	Isyna1	chr8	protein_coding	myo-inositol 1-phosphate synthase A1
chr8	71047921;71048204	71048011;71048355	+	71047921	71048355	cassetteExon	0.5	100	100	ENSMUST00000209285.2	ENSMUSG00000019139.11	Isyna1	chr8	protein_coding	myo-inositol 1-phosphate synthase A1
chr8	71047193	71047473	+	71047398	71047473	A5SS	0.5	50	50	ENSMUST00000210005.2	ENSMUSG00000019139.11	Isyna1	chr8	protein_coding	myo-inositol 1-phosphate synthase A1
chr8	71047634	71048355	+	71047634;71048204	71047789;71048355	ES	0.33	50	50	ENSMUST00000210878.2	ENSMUSG00000019139.11	Isyna1	chr8	protein_coding	myo-inositol 1-phosphate synthase A1
chr8	71047921	71048355	+	71048204	71048355	A5SS	0.33	50	50	ENSMUST00000210878.2	ENSMUSG00000019139.11	Isyna1	chr8	protein_coding	myo-inositol 1-phosphate synthase A1
chr8	71051678	71052024	-	71051678;71051813	71051768;71052024	ES	0.5	50	50	ENSMUST00000049908.11	ENSMUSG00000070003.8	Ssbp4	chr8	protein_coding	single stranded DNA binding protein 4
chr8	71052407	71053046	-	71052407;71052549	71052490;71053046	ES	0.33	50	50	ENSMUST00000049908.11	ENSMUSG00000070003.8	Ssbp4	chr8	protein_coding	single stranded DNA binding protein 4
chr8	71055296	71061223	-	71055296	71060775	5pMXE	0.33	50	50	ENSMUST00000049908.11	ENSMUSG00000070003.8	Ssbp4	chr8	protein_coding	single stranded DNA binding protein 4
chr8	71052549;71052712	71052659;71053046	-	71052549	71053046	cassetteExon	0.5	100	100	ENSMUST00000049908.11	ENSMUSG00000070003.8	Ssbp4	chr8	protein_coding	single stranded DNA binding protein 4
chr8	71053135;71053700	71053502;71054882	-	71053135	71054882	cassetteExon	0.5	100	100	ENSMUST00000049908.11	ENSMUSG00000070003.8	Ssbp4	chr8	protein_coding	single stranded DNA binding protein 4
chr8	71050418	71050547	-	71050418	71050663	A5SS	0.5	50	50	ENSMUST00000049908.11	ENSMUSG00000070003.8	Ssbp4	chr8	protein_coding	single stranded DNA binding protein 4
chr8	71054966	71055085	-	71054966	71055051	A5SS	0.5	50	50	ENSMUST00000049908.11	ENSMUSG00000070003.8	Ssbp4	chr8	protein_coding	single stranded DNA binding protein 4
chr8	71055296	71060647	-	71055296	71060775	A5SS	0.33	50	50	ENSMUST00000049908.11	ENSMUSG00000070003.8	Ssbp4	chr8	protein_coding	single stranded DNA binding protein 4
chr8	71055296	71060647	-	71055296	71061223	A5SS	0.33	50	50	ENSMUST00000210369.2	ENSMUSG00000070003.8	Ssbp4	chr8	protein_coding	single stranded DNA binding protein 4
chr8	71051678	71052024	-	71051813	71052024	A3SS	0.5	50	50	ENSMUST00000211134.2	ENSMUSG00000070003.8	Ssbp4	chr8	protein_coding	single stranded DNA binding protein 4
chr8	71052407	71053046	-	71052407	71052490	5pMXE	0.5	50	50	ENSMUST00000210699.2	ENSMUSG00000070003.8	Ssbp4	chr8	protein_coding	single stranded DNA binding protein 4
chr8	71052407;71052712	71052490;71053046	-	71052407	71053046	cassetteExon	0.5	100	100	ENSMUST00000211608.2	ENSMUSG00000070003.8	Ssbp4	chr8	protein_coding	single stranded DNA binding protein 4
chr8	71104064	71110078	-	71104064;71105171	71105055;71110078	ES	0.33	50	50	ENSMUST00000070173.9	ENSMUSG00000056204.9	Pgpep1	chr8	protein_coding	pyroglutamyl-peptidase I
chr8	71110130	71112951	-	71110130	71112260	5pMXE	0.33	50	50	ENSMUST00000070173.9	ENSMUSG00000056204.9	Pgpep1	chr8	protein_coding	pyroglutamyl-peptidase I
chr8	71105171;71107152	71107084;71110078	-	71105171	71110078	cassetteExon	0.5	100	100	ENSMUST00000070173.9	ENSMUSG00000056204.9	Pgpep1	chr8	protein_coding	pyroglutamyl-peptidase I
chr8	71110130;71111542	71111428;71112260	-	71110130	71112260	cassetteExon	0.5	100	100	ENSMUST00000070173.9	ENSMUSG00000056204.9	Pgpep1	chr8	protein_coding	pyroglutamyl-peptidase I
chr8	71105171	71107886	-	71105171	71110078	A5SS	0.33	50	50	ENSMUST00000070173.9	ENSMUSG00000056204.9	Pgpep1	chr8	protein_coding	pyroglutamyl-peptidase I
chr8	71104064	71110078	-	71105171	71110078	A3SS&ES	0.33	50	50	ENSMUST00000211715.2	ENSMUSG00000056204.9	Pgpep1	chr8	protein_coding	pyroglutamyl-peptidase I
chr8	71105171	71107084	-	71105171	71107886	A5SS	0.33	50	50	ENSMUST00000211526.2	ENSMUSG00000056204.9	Pgpep1	chr8	protein_coding	pyroglutamyl-peptidase I
chr8	71110130	71112260	-	71110130	71111428	5pMXE	0.33	50	50	ENSMUST00000210459.2	ENSMUSG00000056204.9	Pgpep1	chr8	protein_coding	pyroglutamyl-peptidase I
chr8	71110130	71112951	-	71110130	71111428	5pMXE	0.33	50	50	ENSMUST00000210459.2	ENSMUSG00000056204.9	Pgpep1	chr8	protein_coding	pyroglutamyl-peptidase I
chr8	71107152	71110078	-	71104064	71110078	A3SS	0.33	50	50	ENSMUST00000209768.2	ENSMUSG00000056204.9	Pgpep1	chr8	protein_coding	pyroglutamyl-peptidase I
chr8	71129246	71130604	+	71129246;71130526	71130428;71130604	ES	0.33	50	50	ENSMUST00000034311.15	ENSMUSG00000031848.16	Lsm4	chr8	protein_coding	LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
chr8	71129246	71130408	+	71129246	71130428	A3SS	0.33	50	50	ENSMUST00000034311.15	ENSMUSG00000031848.16	Lsm4	chr8	protein_coding	LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
chr8	71130508	71130604	+	71130526	71130604	A5SS	0.33	50	50	ENSMUST00000034311.15	ENSMUSG00000031848.16	Lsm4	chr8	protein_coding	LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
chr8	71129246	71130604	+	71129246;71130508	71130428;71130604	ES	0.33	50	50	ENSMUST00000146972.3	ENSMUSG00000031848.16	Lsm4	chr8	protein_coding	LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
chr8	71129246	71130604	+	71129246;71130526	71130408;71130604	ES	0.33	50	50	ENSMUST00000210071.2	ENSMUSG00000031848.16	Lsm4	chr8	protein_coding	LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
chr8	71129246;71130508	71130408;71130604	+	71129246	71130604	cassetteExon	0.5	100	100	ENSMUST00000210987.2	ENSMUSG00000031848.16	Lsm4	chr8	protein_coding	LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
chr8	71129246	71130604	+	71130526	71130604	5pMXE	0.33	50	50	ENSMUST00000153689.2	ENSMUSG00000031848.16	Lsm4	chr8	protein_coding	LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
chr8	71171281	71174426	+	71171281;71173377	71173069;71174426	ES	0.5	50	50	ENSMUST00000179347.3	ENSMUSG00000095026.3	Gm3336	chr8	protein_coding	predicted gene 3336
chr8	71179698;71182933	71182757;71197923	+	71179698	71197923	cassetteExon	0.5	100	100	ENSMUST00000123739.8	ENSMUSG00000031842.16	Pde4c	chr8	protein_coding	phosphodiesterase 4C, cAMP specific
chr8	71176866	71177164	+	71177017	71177164	A5SS	0.5	50	50	ENSMUST00000123739.8	ENSMUSG00000031842.16	Pde4c	chr8	protein_coding	phosphodiesterase 4C, cAMP specific
chr8	71195898	71197923	+	71179698	71197923	A5SS	0.33	50	50	ENSMUST00000123739.8	ENSMUSG00000031842.16	Pde4c	chr8	protein_coding	phosphodiesterase 4C, cAMP specific
chr8	71201682	71201872	+	71201682	71201974	A3SS	0.5	50	50	ENSMUST00000034307.14	ENSMUSG00000031842.16	Pde4c	chr8	protein_coding	phosphodiesterase 4C, cAMP specific
chr8	71195898	71197923	+	71182933	71197923	A5SS	0.33	50	50	ENSMUST00000239435.2	ENSMUSG00000031842.16	Pde4c	chr8	protein_coding	phosphodiesterase 4C, cAMP specific
chr8	71207517	71208633	+	71207517	71208503	A3SS	0.5	50	50	ENSMUST00000110093.9	ENSMUSG00000031840.15	Rab3a	chr8	protein_coding	RAB3A, member RAS oncogene family
chr8	71207512	71208503	+	71207517	71208503	A5SS	0.5	50	50	ENSMUST00000110093.9	ENSMUSG00000031840.15	Rab3a	chr8	protein_coding	RAB3A, member RAS oncogene family
chr8	71207512	71208478	+	71207512	71208503	A3SS	0.5	50	50	ENSMUST00000034301.12	ENSMUSG00000031840.15	Rab3a	chr8	protein_coding	RAB3A, member RAS oncogene family
chr8	71212113;71212899	71212739;71213014	-	71212113	71213014	cassetteExon	0.5	100	100	ENSMUST00000038626.10	ENSMUSG00000035559.10	Mpv17l2	chr8	protein_coding	MPV17 mitochondrial membrane protein-like 2
chr8	71213180	71213366	-	71213184	71213366	A3SS	0.5	50	50	ENSMUST00000038626.10	ENSMUSG00000035559.10	Mpv17l2	chr8	protein_coding	MPV17 mitochondrial membrane protein-like 2
chr8	71225339;71225560	71225465;71227300	-	71225339	71227300	cassetteExon	0.5	100	100	ENSMUST00000034296.15	ENSMUSG00000031834.16	Pik3r2	chr8	protein_coding	phosphoinositide-3-kinase regulatory subunit 2
chr8	71227996;71228700	71228492;71229251	-	71227996	71229251	cassetteExon	0.5	100	100	ENSMUST00000034296.15	ENSMUSG00000031834.16	Pik3r2	chr8	protein_coding	phosphoinositide-3-kinase regulatory subunit 2
chr8	71232581	71232917	-	71232581	71232839	A5SS	0.5	50	50	ENSMUST00000212140.2	ENSMUSG00000031833.11	Mast3	chr8	protein_coding	microtubule associated serine/threonine kinase 3
chr8	71249446	71252102	-	71249446	71249544	5pMXE	0.5	50	50	ENSMUST00000166004.3	ENSMUSG00000031833.11	Mast3	chr8	protein_coding	microtubule associated serine/threonine kinase 3
chr8	71241928;71242347	71242327;71242492	-	71241928	71242492	cassetteExon	0.5	100	100	ENSMUST00000166004.3	ENSMUSG00000031833.11	Mast3	chr8	protein_coding	microtubule associated serine/threonine kinase 3
chr8	71242561	71242641	-	71242564	71242641	A3SS	0.5	50	50	ENSMUST00000166004.3	ENSMUSG00000031833.11	Mast3	chr8	protein_coding	microtubule associated serine/threonine kinase 3
chr8	71242729	71243301	-	71242729	71249357	A5SS	0.33	50	50	ENSMUST00000166004.3	ENSMUSG00000031833.11	Mast3	chr8	protein_coding	microtubule associated serine/threonine kinase 3
chr8	71242729	71244870	-	71242729	71249357	A5SS	0.33	50	50	ENSMUST00000166004.3	ENSMUSG00000031833.11	Mast3	chr8	protein_coding	microtubule associated serine/threonine kinase 3
chr8	71242729	71252102	-	71242729	71244870	5pMXE	0.25	50	50	ENSMUST00000211948.2	ENSMUSG00000031833.11	Mast3	chr8	protein_coding	microtubule associated serine/threonine kinase 3
chr8	71242729	71243301	-	71242729	71244870	A5SS	0.25	50	50	ENSMUST00000211948.2	ENSMUSG00000031833.11	Mast3	chr8	protein_coding	microtubule associated serine/threonine kinase 3
chr8	71242729;71249446	71249357;71252102	-	71242729	71252102	cassetteExon	0.5	100	100	ENSMUST00000212757.2	ENSMUSG00000031833.11	Mast3	chr8	protein_coding	microtubule associated serine/threonine kinase 3
chr8	71242729	71243301	-	71242729	71252102	A5SS	0.25	50	50	ENSMUST00000212757.2	ENSMUSG00000031833.11	Mast3	chr8	protein_coding	microtubule associated serine/threonine kinase 3
chr8	71261262;71262250	71261992;71262475	+	71261262	71262475	cassetteExon	0.5	100	100	ENSMUST00000211936.2	ENSMUSG00000000791.10	Il12rb1	chr8	protein_coding	interleukin 12 receptor, beta 1
chr8	71269990	71272326	+	71269990;71272065	71271969;71272326	ES	0.5	50	50	ENSMUST00000000808.8	ENSMUSG00000000791.10	Il12rb1	chr8	protein_coding	interleukin 12 receptor, beta 1
chr8	71290190	71292252	-	71290190	71291338	A5SS&ES	0.5	50	50	ENSMUST00000002989.11	ENSMUSG00000002910.12	Arrdc2	chr8	protein_coding	arrestin domain containing 2
chr8	71291689	71292252	-	71291689	71291772	A5SS	0.5	50	50	ENSMUST00000002989.11	ENSMUSG00000002910.12	Arrdc2	chr8	protein_coding	arrestin domain containing 2
chr8	71290190;71291689	71291338;71292252	-	71290190	71292252	cassetteExon	0.5	100	100	ENSMUST00000212405.2	ENSMUSG00000002910.12	Arrdc2	chr8	protein_coding	arrestin domain containing 2
chr8	71299208	71300819	-	71299208;71300708	71300697;71300819	ES	0.33	50	50	ENSMUST00000110081.10	ENSMUSG00000002908.18	Kcnn1	chr8	protein_coding	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1
chr8	71300946	71303244	-	71300946;71301532	71301422;71303244	ES	0.5	50	50	ENSMUST00000110081.10	ENSMUSG00000002908.18	Kcnn1	chr8	protein_coding	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1
chr8	71308121	71314309	-	71308121	71309576	5pMXE	0.33	50	50	ENSMUST00000110081.10	ENSMUSG00000002908.18	Kcnn1	chr8	protein_coding	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1
chr8	71308121	71314342	-	71308121	71309576	5pMXE	0.33	50	50	ENSMUST00000110081.10	ENSMUSG00000002908.18	Kcnn1	chr8	protein_coding	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1
chr8	71299208;71299416	71299408;71300819	-	71299208;71300708	71300697;71300819	MXE	0.5	100	100	ENSMUST00000110081.10	ENSMUSG00000002908.18	Kcnn1	chr8	protein_coding	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1
chr8	71299208	71300819	-	71299208;71299416	71299408;71300819	ES	0.33	50	50	ENSMUST00000110078.5	ENSMUSG00000002908.18	Kcnn1	chr8	protein_coding	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1
chr8	71299416	71300844	-	71299416	71300819	A5SS	0.5	50	50	ENSMUST00000110078.5	ENSMUSG00000002908.18	Kcnn1	chr8	protein_coding	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1
chr8	71308121	71314342	-	71308121	71314309	A5SS	0.33	50	50	ENSMUST00000212611.2	ENSMUSG00000002908.18	Kcnn1	chr8	protein_coding	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1
chr8	71299208	71300697	-	71299208	71299408	A5SS&ES	0.33	50	50	ENSMUST00000212243.2	ENSMUSG00000002908.18	Kcnn1	chr8	protein_coding	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1
chr8	71299208	71300819	-	71299208	71299408	A5SS&ES	0.33	50	50	ENSMUST00000212243.2	ENSMUSG00000002908.18	Kcnn1	chr8	protein_coding	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1
chr8	71322718	71325688	-	71322718	71326103	A5SS	0.5	50	50	ENSMUST00000007865.7	ENSMUSG00000007721.7	Ccdc124	chr8	protein_coding	coiled-coil domain containing 124
chr8	71348151	71348560	-	71348151;71348353	71348244;71348560	ES	0.5	50	50	ENSMUST00000054220.10	ENSMUSG00000045128.10	Rpl18a	chr8	protein_coding	ribosomal protein L18A
chr8	71348824	71350003	-	71348956	71350003	A3SS	0.5	50	50	ENSMUST00000054220.10	ENSMUSG00000045128.10	Rpl18a	chr8	protein_coding	ribosomal protein L18A
chr8	71348689	71348790	-	71348689	71348777	A5SS	0.5	50	50	ENSMUST00000054220.10	ENSMUSG00000045128.10	Rpl18a	chr8	protein_coding	ribosomal protein L18A
chr8	71348956	71349773	-	71348956	71350003	A5SS	0.33	50	50	ENSMUST00000054220.10	ENSMUSG00000045128.10	Rpl18a	chr8	protein_coding	ribosomal protein L18A
chr8	71348956	71349977	-	71348956	71350003	A5SS	0.33	50	50	ENSMUST00000054220.10	ENSMUSG00000045128.10	Rpl18a	chr8	protein_coding	ribosomal protein L18A
chr8	71348151	71348560	-	71348353	71348560	A3SS	0.5	50	50	ENSMUST00000212796.2	ENSMUSG00000045128.10	Rpl18a	chr8	protein_coding	ribosomal protein L18A
chr8	71348151	71348560	-	71348151	71348244	A5SS	0.5	50	50	ENSMUST00000212019.2	ENSMUSG00000045128.10	Rpl18a	chr8	protein_coding	ribosomal protein L18A
chr8	71348956	71349977	-	71348956	71349773	5pMXE	0.33	50	50	ENSMUST00000212709.2	ENSMUSG00000045128.10	Rpl18a	chr8	protein_coding	ribosomal protein L18A
chr8	71363693;71364170	71364014;71364490	+	71363693	71364490	cassetteExon	0.5	100	100	ENSMUST00000019405.4	ENSMUSG00000019261.4	Map1s	chr8	protein_coding	microtubule-associated protein 1S
chr8	71363693;71364170	71364051;71364490	+	71363693	71364490	cassetteExon	0.5	100	100	ENSMUST00000019405.4	ENSMUSG00000019261.4	Map1s	chr8	protein_coding	microtubule-associated protein 1S
chr8	71363693;71364170	71364088;71364490	+	71363693	71364490	cassetteExon	0.5	100	100	ENSMUST00000019405.4	ENSMUSG00000019261.4	Map1s	chr8	protein_coding	microtubule-associated protein 1S
chr8	71367638;71368185	71368118;71368995	+	71367638	71368995	cassetteExon	0.5	100	100	ENSMUST00000019405.4	ENSMUSG00000019261.4	Map1s	chr8	protein_coding	microtubule-associated protein 1S
chr8	71359203	71363589	+	71358771	71363589	A5SS	0.5	50	50	ENSMUST00000019405.4	ENSMUSG00000019261.4	Map1s	chr8	protein_coding	microtubule-associated protein 1S
chr8	71363693	71364014	+	71363693	71364088	A3SS	0.25	50	50	ENSMUST00000212544.2	ENSMUSG00000019261.4	Map1s	chr8	protein_coding	microtubule-associated protein 1S
chr8	71363693	71364051	+	71363693	71364088	A3SS	0.25	50	50	ENSMUST00000212544.2	ENSMUSG00000019261.4	Map1s	chr8	protein_coding	microtubule-associated protein 1S
chr8	71363693	71364490	+	71363693	71364014	3pMXE	0.25	50	50	ENSMUST00000211880.2	ENSMUSG00000019261.4	Map1s	chr8	protein_coding	microtubule-associated protein 1S
chr8	71363693	71364051	+	71363693	71364014	A3SS	0.25	50	50	ENSMUST00000211880.2	ENSMUSG00000019261.4	Map1s	chr8	protein_coding	microtubule-associated protein 1S
chr8	71463152	71479272	-	71463152;71473902	71473752;71479272	ES	0.5	50	50	ENSMUST00000211950.2	ENSMUSG00000101854.3	1700026F02Rik	chr8	lncRNA	RIKEN cDNA 1700026F02 gene
chr8	71401179	71409291	-	71401182	71409291	A3SS	0.5	50	50	ENSMUST00000211950.2	ENSMUSG00000101854.3	1700026F02Rik	chr8	lncRNA	RIKEN cDNA 1700026F02 gene
chr8	71459530	71462958	-	71409596	71462958	A3SS	0.5	50	50	ENSMUST00000211950.2	ENSMUSG00000101854.3	1700026F02Rik	chr8	lncRNA	RIKEN cDNA 1700026F02 gene
chr8	71463152	71495293	-	71463152	71479272	5pMXE	0.33	50	50	ENSMUST00000211987.2	ENSMUSG00000101854.3	1700026F02Rik	chr8	lncRNA	RIKEN cDNA 1700026F02 gene
chr8	71463152	71473752	-	71463152	71495293	A5SS	0.33	50	50	ENSMUST00000212266.2	ENSMUSG00000101854.3	1700026F02Rik	chr8	lncRNA	RIKEN cDNA 1700026F02 gene
chr8	71715748	71724928	-	71715748;71721928	71721870;71724928	ES	0.5	50	50	ENSMUST00000123495.8	ENSMUSG00000035439.14	Haus8	chr8	protein_coding	4HAUS augmin-like complex, subunit 8
chr8	71708356;71708764	71708652;71709103	-	71708356	71709103	cassetteExon	0.5	100	100	ENSMUST00000123495.8	ENSMUSG00000035439.14	Haus8	chr8	protein_coding	4HAUS augmin-like complex, subunit 8
chr8	71709198	71710000	-	71709195	71710000	A3SS	0.5	50	50	ENSMUST00000123495.8	ENSMUSG00000035439.14	Haus8	chr8	protein_coding	4HAUS augmin-like complex, subunit 8
chr8	71713154	71715696	-	71710069	71715696	A3SS	0.5	50	50	ENSMUST00000123495.8	ENSMUSG00000035439.14	Haus8	chr8	protein_coding	4HAUS augmin-like complex, subunit 8
chr8	71708356	71709103	-	71708764	71709103	3pMXE	0.5	50	50	ENSMUST00000129455.2	ENSMUSG00000035439.14	Haus8	chr8	protein_coding	4HAUS augmin-like complex, subunit 8
chr8	71787038;71789609	71789520;71791551	+	71787038	71791551	cassetteExon	0.5	100	100	ENSMUST00000212935.2	ENSMUSG00000004677.18	Myo9b	chr8	protein_coding	myosin IXb
chr8	71810880;71811307	71811260;71811607	+	71810880	71811607	cassetteExon	0.5	100	100	ENSMUST00000212935.2	ENSMUSG00000004677.18	Myo9b	chr8	protein_coding	myosin IXb
chr8	71786475	71786960	+	71786475	71786957	A3SS	0.5	50	50	ENSMUST00000212935.2	ENSMUSG00000004677.18	Myo9b	chr8	protein_coding	myosin IXb
chr8	71806779	71807161	+	71806779	71807158	A3SS	0.5	50	50	ENSMUST00000212935.2	ENSMUSG00000004677.18	Myo9b	chr8	protein_coding	myosin IXb
chr8	71812096	71812202	+	71812096	71812308	A3SS	0.5	50	50	ENSMUST00000212935.2	ENSMUSG00000004677.18	Myo9b	chr8	protein_coding	myosin IXb
chr8	71802839	71803571	+	71802833	71803571	A5SS	0.5	50	50	ENSMUST00000212935.2	ENSMUSG00000004677.18	Myo9b	chr8	protein_coding	myosin IXb
chr8	71820013	71820142	+	71820013	71820288	A3SS	0.5	50	50	ENSMUST00000110053.9	ENSMUSG00000002395.15	Use1	chr8	protein_coding	unconventional SNARE in the ER 1 homolog (S. cerevisiae)
chr8	71824629;71825277	71825112;71825393	+	71824629	71825393	cassetteExon	0.5	100	100	ENSMUST00000110051.2	ENSMUSG00000002396.9	Ocel1	chr8	protein_coding	occludin/ELL domain containing 1
chr8	71824629	71825112	+	71824629	71827361	A3SS	0.33	50	50	ENSMUST00000110052.2	ENSMUSG00000002396.9	Ocel1	chr8	protein_coding	occludin/ELL domain containing 1
chr8	71824629	71825393	+	71824629	71827361	A3SS	0.33	50	50	ENSMUST00000110052.2	ENSMUSG00000002396.9	Ocel1	chr8	protein_coding	occludin/ELL domain containing 1
chr8	71824629	71825393	+	71825277	71825393	5pMXE	0.5	50	50	ENSMUST00000126049.2	ENSMUSG00000002396.9	Ocel1	chr8	protein_coding	occludin/ELL domain containing 1
chr8	71827398;71828212	71828147;71828393	-	71827398	71828393	cassetteExon	0.5	100	100	ENSMUST00000132630.2	ENSMUSG00000002393.15	Nr2f6	chr8	protein_coding	nuclear receptor subfamily 2, group F, member 6
chr8	71828146	71828393	-	71827398	71828393	A3SS	0.33	50	50	ENSMUST00000132630.2	ENSMUSG00000002393.15	Nr2f6	chr8	protein_coding	nuclear receptor subfamily 2, group F, member 6
chr8	71831171	71833635	-	71831127	71833635	A3SS	0.33	50	50	ENSMUST00000002466.9	ENSMUSG00000002393.15	Nr2f6	chr8	protein_coding	nuclear receptor subfamily 2, group F, member 6
chr8	71831200	71833635	-	71831127	71833635	A3SS	0.33	50	50	ENSMUST00000002466.9	ENSMUSG00000002393.15	Nr2f6	chr8	protein_coding	nuclear receptor subfamily 2, group F, member 6
chr8	71827398	71828393	-	71827398	71828147	A5SS	0.5	50	50	ENSMUST00000155463.2	ENSMUSG00000002393.15	Nr2f6	chr8	protein_coding	nuclear receptor subfamily 2, group F, member 6
chr8	71828212	71828393	-	71828146	71828393	A3SS	0.33	50	50	ENSMUST00000156270.2	ENSMUSG00000002393.15	Nr2f6	chr8	protein_coding	nuclear receptor subfamily 2, group F, member 6
chr8	71831171	71833635	-	71831171	71833497	5pMXE	0.5	50	50	ENSMUST00000127443.2	ENSMUSG00000002393.15	Nr2f6	chr8	protein_coding	nuclear receptor subfamily 2, group F, member 6
chr8	71831200	71833635	-	71831171	71833635	A3SS	0.33	50	50	ENSMUST00000124732.2	ENSMUSG00000002393.15	Nr2f6	chr8	protein_coding	nuclear receptor subfamily 2, group F, member 6
chr8	71843425	71843565	-	71843373	71843565	A3SS	0.5	50	50	ENSMUST00000212626.2	ENSMUSG00000034911.9	Ushbp1	chr8	protein_coding	USH1 protein network component harmonin binding protein 1
chr8	71852451	71852609	+	71852451	71854324	A3SS	0.5	50	50	ENSMUST00000002473.10	ENSMUSG00000031820.10	Babam1	chr8	protein_coding	BRISC and BRCA1 A complex member 1
chr8	71859617	71859917	+	71859617	71859857	A3SS	0.5	50	50	ENSMUST00000119976.8	ENSMUSG00000046295.14	Ankle1	chr8	protein_coding	ankyrin repeat and LEM domain containing 1
chr8	71921969	71924681	+	71921969;71922336	71922187;71924681	ES	0.33	50	50	ENSMUST00000147843.8	ENSMUSG00000074247.11	Dda1	chr8	protein_coding	DET1 and DDB1 associated 1
chr8	71924761	71926419	+	71924761	71924839	3pMXE	0.5	50	50	ENSMUST00000147843.8	ENSMUSG00000074247.11	Dda1	chr8	protein_coding	DET1 and DDB1 associated 1
chr8	71921969	71924685	+	71921969	71922187	A3SS&ES	0.33	50	50	ENSMUST00000147843.8	ENSMUSG00000074247.11	Dda1	chr8	protein_coding	DET1 and DDB1 associated 1
chr8	71923204	71924681	+	71922336	71924681	A5SS	0.33	50	50	ENSMUST00000147843.8	ENSMUSG00000074247.11	Dda1	chr8	protein_coding	DET1 and DDB1 associated 1
chr8	71921969	71927132	+	71921969	71924685	3pMXE	0.25	50	50	ENSMUST00000127885.2	ENSMUSG00000074247.11	Dda1	chr8	protein_coding	DET1 and DDB1 associated 1
chr8	71921969	71924681	+	71921969	71924685	A3SS	0.25	50	50	ENSMUST00000127885.2	ENSMUSG00000074247.11	Dda1	chr8	protein_coding	DET1 and DDB1 associated 1
chr8	71924761	71926419	+	71924761;71924890	71924839;71926419	ES	0.5	50	50	ENSMUST00000124745.8	ENSMUSG00000074247.11	Dda1	chr8	protein_coding	DET1 and DDB1 associated 1
chr8	71924890	71927132	+	71924890;71926480	71926419;71927132	ES	0.33	50	50	ENSMUST00000124745.8	ENSMUSG00000074247.11	Dda1	chr8	protein_coding	DET1 and DDB1 associated 1
chr8	71923204	71924681	+	71921969	71924681	A5SS	0.33	50	50	ENSMUST00000124745.8	ENSMUSG00000074247.11	Dda1	chr8	protein_coding	DET1 and DDB1 associated 1
chr8	71924761;71924890	71924839;71927132	+	71924761;71926480	71926419;71927132	MXE	0.5	100	100	ENSMUST00000130098.8	ENSMUSG00000074247.11	Dda1	chr8	protein_coding	DET1 and DDB1 associated 1
chr8	71921969;71924890	71924681;71927132	+	71921969	71927132	cassetteExon	0.5	100	100	ENSMUST00000138892.2	ENSMUSG00000074247.11	Dda1	chr8	protein_coding	DET1 and DDB1 associated 1
chr8	71921969;71924890	71924685;71927132	+	71921969	71927132	cassetteExon	0.5	100	100	ENSMUST00000138892.2	ENSMUSG00000074247.11	Dda1	chr8	protein_coding	DET1 and DDB1 associated 1
chr8	71921969	71922187	+	71921969	71927132	A3SS	0.25	50	50	ENSMUST00000138892.2	ENSMUSG00000074247.11	Dda1	chr8	protein_coding	DET1 and DDB1 associated 1
chr8	71926480	71927132	+	71921969	71927132	A5SS	0.33	50	50	ENSMUST00000138892.2	ENSMUSG00000074247.11	Dda1	chr8	protein_coding	DET1 and DDB1 associated 1
chr8	71924761	71926419	+	71924890	71926419	A5SS	0.5	50	50	ENSMUST00000098645.11	ENSMUSG00000074247.11	Dda1	chr8	protein_coding	DET1 and DDB1 associated 1
chr8	71921969	71927132	+	71921969	71924681	3pMXE	0.25	50	50	ENSMUST00000150984.2	ENSMUSG00000074247.11	Dda1	chr8	protein_coding	DET1 and DDB1 associated 1
chr8	71933886	71934777	-	71933886;71934670	71934596;71934777	ES	0.5	50	50	ENSMUST00000093450.6	ENSMUSG00000034863.10	Ano8	chr8	protein_coding	anoctamin 8
chr8	71935054	71935624	-	71935054;71935303	71935151;71935624	ES	0.5	50	50	ENSMUST00000093450.6	ENSMUSG00000034863.10	Ano8	chr8	protein_coding	anoctamin 8
chr8	71933886;71934394	71934263;71934596	-	71933886	71934596	cassetteExon	0.5	100	100	ENSMUST00000093450.6	ENSMUSG00000034863.10	Ano8	chr8	protein_coding	anoctamin 8
chr8	71933886;71934670	71934263;71934777	-	71933886	71934777	cassetteExon	0.5	100	100	ENSMUST00000213016.2	ENSMUSG00000034863.10	Ano8	chr8	protein_coding	anoctamin 8
chr8	71943181	71943710	+	71943181;71943611	71943539;71943710	ES	0.5	50	50	ENSMUST00000007754.13	ENSMUSG00000007610.16	Gtpbp3	chr8	protein_coding	GTP binding protein 3
chr8	71941962	71942069	+	71941962	71942072	A3SS	0.5	50	50	ENSMUST00000007754.13	ENSMUSG00000007610.16	Gtpbp3	chr8	protein_coding	GTP binding protein 3
chr8	71943181	71943299	+	71943181	71943539	A3SS	0.33	50	50	ENSMUST00000007754.13	ENSMUSG00000007610.16	Gtpbp3	chr8	protein_coding	GTP binding protein 3
chr8	71943181;71943611	71943299;71943710	+	71943181	71943710	cassetteExon	0.5	100	100	ENSMUST00000095259.10	ENSMUSG00000007610.16	Gtpbp3	chr8	protein_coding	GTP binding protein 3
chr8	71988580	71989003	-	71988469	71989003	A3SS	0.5	50	50	ENSMUST00000051672.9	ENSMUSG00000046718.9	Bst2	chr8	protein_coding	bone marrow stromal cell antigen 2
chr8	71995875;71996127	71996031;71997868	+	71995875	71997868	cassetteExon	0.5	100	100	ENSMUST00000212954.2	ENSMUSG00000031813.9	Mvb12a	chr8	protein_coding	multivesicular body subunit 12A
chr8	71996767	71997868	+	71995875	71997868	A5SS	0.33	50	50	ENSMUST00000212954.2	ENSMUSG00000031813.9	Mvb12a	chr8	protein_coding	multivesicular body subunit 12A
chr8	71996127;71996767	71996601;71997868	+	71996127	71997868	cassetteExon	0.5	100	100	ENSMUST00000034272.9	ENSMUSG00000031813.9	Mvb12a	chr8	protein_coding	multivesicular body subunit 12A
chr8	71995875	71997868	+	71995875	71996031	3pMXE	0.5	50	50	ENSMUST00000212234.2	ENSMUSG00000031813.9	Mvb12a	chr8	protein_coding	multivesicular body subunit 12A
chr8	72021667;72022092	72021986;72023365	+	72021667	72023365	cassetteExon	0.5	100	100	ENSMUST00000212889.2	ENSMUSG00000031808.8	Slc27a1	chr8	protein_coding	solute carrier family 27 (fatty acid transporter), member 1
chr8	72021667;72022485	72021986;72023365	+	72021667	72023365	cassetteExon	0.5	100	100	ENSMUST00000212889.2	ENSMUSG00000031808.8	Slc27a1	chr8	protein_coding	solute carrier family 27 (fatty acid transporter), member 1
chr8	72021667;72022485	72021986;72032048	+	72021667;72023532	72023365;72032048	MXE	0.5	100	100	ENSMUST00000212889.2	ENSMUSG00000031808.8	Slc27a1	chr8	protein_coding	solute carrier family 27 (fatty acid transporter), member 1
chr8	72022956	72023365	+	72021667	72023365	A5SS	0.25	50	50	ENSMUST00000212889.2	ENSMUSG00000031808.8	Slc27a1	chr8	protein_coding	solute carrier family 27 (fatty acid transporter), member 1
chr8	72022092	72023365	+	72022956	72023365	A5SS&ES	0.25	50	50	ENSMUST00000212989.2	ENSMUSG00000031808.8	Slc27a1	chr8	protein_coding	solute carrier family 27 (fatty acid transporter), member 1
chr8	72022485	72023365	+	72022956	72023365	A5SS&ES	0.25	50	50	ENSMUST00000212989.2	ENSMUSG00000031808.8	Slc27a1	chr8	protein_coding	solute carrier family 27 (fatty acid transporter), member 1
chr8	72022485	72023365	+	72022092	72023365	A5SS	0.25	50	50	ENSMUST00000034267.5	ENSMUSG00000031808.8	Slc27a1	chr8	protein_coding	solute carrier family 27 (fatty acid transporter), member 1
chr8	72022485	72032048	+	72023532	72032048	A5SS&ES	0.5	50	50	ENSMUST00000034267.5	ENSMUSG00000031808.8	Slc27a1	chr8	protein_coding	solute carrier family 27 (fatty acid transporter), member 1
chr8	72022485;72023532	72023365;72032048	+	72022485	72032048	cassetteExon	0.5	100	100	ENSMUST00000212225.2	ENSMUSG00000031808.8	Slc27a1	chr8	protein_coding	solute carrier family 27 (fatty acid transporter), member 1
chr8	72021667	72023365	+	72022485	72023365	5pMXE	0.25	50	50	ENSMUST00000212111.2	ENSMUSG00000031808.8	Slc27a1	chr8	protein_coding	solute carrier family 27 (fatty acid transporter), member 1
chr8	72047845	72051722	+	72047845	72048701	3pMXE	0.5	50	50	ENSMUST00000034264.11	ENSMUSG00000031807.11	Pgls	chr8	protein_coding	6-phosphogluconolactonase
chr8	72047414	72047650	+	72047414	72047705	A3SS	0.5	50	50	ENSMUST00000034264.11	ENSMUSG00000031807.11	Pgls	chr8	protein_coding	6-phosphogluconolactonase
chr8	72045432	72046728	+	72045148	72046728	A5SS	0.5	50	50	ENSMUST00000034264.11	ENSMUSG00000031807.11	Pgls	chr8	protein_coding	6-phosphogluconolactonase
chr8	72053173	72054743	+	72053173	72053330	3pMXE	0.5	50	50	ENSMUST00000127626.8	ENSMUSG00000031807.11	Pgls	chr8	protein_coding	6-phosphogluconolactonase
chr8	72050467	72051722	+	72047845	72051722	A5SS	0.5	50	50	ENSMUST00000127626.8	ENSMUSG00000031807.11	Pgls	chr8	protein_coding	6-phosphogluconolactonase
chr8	72057679	72059305	+	72057679;72058362	72058251;72059305	ES	0.5	50	50	ENSMUST00000143662.8	ENSMUSG00000043243.16	Niban3	chr8	protein_coding	niban apoptosis regulator 3
chr8	72059388	72060149	+	72059388	72060185	A3SS	0.25	50	50	ENSMUST00000143662.8	ENSMUSG00000043243.16	Niban3	chr8	protein_coding	niban apoptosis regulator 3
chr8	72059388	72060153	+	72059388	72060185	A3SS	0.25	50	50	ENSMUST00000143662.8	ENSMUSG00000043243.16	Niban3	chr8	protein_coding	niban apoptosis regulator 3
chr8	72059388	72060171	+	72059388	72060185	A3SS	0.25	50	50	ENSMUST00000143662.8	ENSMUSG00000043243.16	Niban3	chr8	protein_coding	niban apoptosis regulator 3
chr8	72059388	72060153	+	72059388	72060149	A3SS	0.25	50	50	ENSMUST00000124485.8	ENSMUSG00000043243.16	Niban3	chr8	protein_coding	niban apoptosis regulator 3
chr8	72059388	72060171	+	72059388	72060149	A3SS	0.25	50	50	ENSMUST00000124485.8	ENSMUSG00000043243.16	Niban3	chr8	protein_coding	niban apoptosis regulator 3
chr8	72057679	72059305	+	72058362	72059305	A5SS	0.5	50	50	ENSMUST00000124485.8	ENSMUSG00000043243.16	Niban3	chr8	protein_coding	niban apoptosis regulator 3
chr8	72059388	72060153	+	72059388	72060171	A3SS	0.25	50	50	ENSMUST00000126559.2	ENSMUSG00000043243.16	Niban3	chr8	protein_coding	niban apoptosis regulator 3
chr8	72075474	72075682	+	72075474	72075734	A3SS	0.5	50	50	ENSMUST00000047903.10	ENSMUSG00000034807.10	Colgalt1	chr8	protein_coding	collagen beta(1-O)galactosyltransferase 1
chr8	72118722	72124270	-	72118722;72119314	72119285;72124270	ES	0.5	50	50	ENSMUST00000030170.15	ENSMUSG00000034799.17	Unc13a	chr8	protein_coding	unc-13 homolog A
chr8	72083690;72086139	72086083;72087161	-	72083690	72087161	cassetteExon	0.5	100	100	ENSMUST00000030170.15	ENSMUSG00000034799.17	Unc13a	chr8	protein_coding	unc-13 homolog A
chr8	72090571	72091861	-	72090454	72091861	A3SS	0.5	50	50	ENSMUST00000030170.15	ENSMUSG00000034799.17	Unc13a	chr8	protein_coding	unc-13 homolog A
chr8	72092436	72094000	-	72092467	72094000	A3SS	0.5	50	50	ENSMUST00000030170.15	ENSMUSG00000034799.17	Unc13a	chr8	protein_coding	unc-13 homolog A
chr8	72094850	72095739	-	72094850	72095736	A5SS	0.5	50	50	ENSMUST00000030170.15	ENSMUSG00000034799.17	Unc13a	chr8	protein_coding	unc-13 homolog A
chr8	72108945	72110668	-	72108945	72110647	A5SS	0.5	50	50	ENSMUST00000030170.15	ENSMUSG00000034799.17	Unc13a	chr8	protein_coding	unc-13 homolog A
chr8	72115179	72115484	-	72115179	72115499	A5SS	0.5	50	50	ENSMUST00000030170.15	ENSMUSG00000034799.17	Unc13a	chr8	protein_coding	unc-13 homolog A
chr8	72118722	72124270	-	72118722	72119285	5pMXE	0.5	50	50	ENSMUST00000175780.2	ENSMUSG00000034799.17	Unc13a	chr8	protein_coding	unc-13 homolog A
chr8	72130245	72130973	+	72129227	72130973	A5SS	0.5	50	50	ENSMUST00000110013.10	ENSMUSG00000031805.18	Jak3	chr8	protein_coding	Janus kinase 3
chr8	72142076	72142816	+	72140806	72142816	A5SS	0.5	50	50	ENSMUST00000051995.14	ENSMUSG00000031805.18	Jak3	chr8	protein_coding	Janus kinase 3
chr8	72162770	72163642	-	72162770;72163138	72162983;72163642	ES	0.5	50	50	ENSMUST00000093444.13	ENSMUSG00000070000.14	Fcho1	chr8	protein_coding	FCH domain only 1
chr8	72167696	72168121	-	72167571	72168121	A3SS	0.5	50	50	ENSMUST00000093444.13	ENSMUSG00000070000.14	Fcho1	chr8	protein_coding	FCH domain only 1
chr8	72168574	72169201	-	72168427	72169201	A3SS	0.5	50	50	ENSMUST00000093444.13	ENSMUSG00000070000.14	Fcho1	chr8	protein_coding	FCH domain only 1
chr8	72167416	72167523	-	72167416	72167527	A5SS	0.5	50	50	ENSMUST00000093444.13	ENSMUSG00000070000.14	Fcho1	chr8	protein_coding	FCH domain only 1
chr8	72173944	72174463	-	72173948	72174463	A3SS	0.5	50	50	ENSMUST00000146100.8	ENSMUSG00000070000.14	Fcho1	chr8	protein_coding	FCH domain only 1
chr8	72174503	72175879	-	72174503	72178277	A5SS	0.5	50	50	ENSMUST00000146100.8	ENSMUSG00000070000.14	Fcho1	chr8	protein_coding	FCH domain only 1
chr8	72604266;72605126	72604967;72606050	-	72604266	72606050	cassetteExon	0.5	100	100	ENSMUST00000212931.2	ENSMUSG00000110685.2	Gm5373	chr8	transcribed_unprocessed_pseudogene	predicted gene 5373
chr8	72585821	72595525	-	72585821	72595494	A5SS	0.5	50	50	ENSMUST00000212931.2	ENSMUSG00000110685.2	Gm5373	chr8	transcribed_unprocessed_pseudogene	predicted gene 5373
chr8	72636577	72641108	+	72636052	72641108	A5SS	0.5	50	50	ENSMUST00000188685.7	ENSMUSG00000056019.13	Zfp709	chr8	protein_coding	zinc finger protein 709
chr8	72662622	72666966	+	72662582	72666966	A5SS	0.33	50	50	ENSMUST00000110002.8	ENSMUSG00000089857.10	Zfp882	chr8	protein_coding	zinc finger protein 882
chr8	72663125	72666966	+	72662582	72666966	A5SS	0.33	50	50	ENSMUST00000110002.8	ENSMUSG00000089857.10	Zfp882	chr8	protein_coding	zinc finger protein 882
chr8	72663125	72666966	+	72662622	72666966	A5SS	0.33	50	50	ENSMUST00000125802.8	ENSMUSG00000089857.10	Zfp882	chr8	protein_coding	zinc finger protein 882
chr8	72662582	72666966	+	72662582	72682046	A3SS	0.5	50	50	ENSMUST00000131544.8	ENSMUSG00000066880.16	Zfp617	chr8	protein_coding	zinc finger protein 617
chr8	72676816	72682046	+	72662582	72682046	A5SS	0.5	50	50	ENSMUST00000131544.8	ENSMUSG00000066880.16	Zfp617	chr8	protein_coding	zinc finger protein 617
chr8	72719764	72721743	+	72719764;72720004	72719944;72721743	ES	0.33	50	50	ENSMUST00000131237.8	ENSMUSG00000052446.18	Zfp961	chr8	protein_coding	zinc finger protein 961
chr8	72705004	72719638	+	72704947	72719638	A5SS	0.33	50	50	ENSMUST00000131237.8	ENSMUSG00000052446.18	Zfp961	chr8	protein_coding	zinc finger protein 961
chr8	72705004	72719944	+	72719764	72719944	A5SS&ES	0.25	50	50	ENSMUST00000131237.8	ENSMUSG00000052446.18	Zfp961	chr8	protein_coding	zinc finger protein 961
chr8	72705004	72721743	+	72720004	72721743	A5SS&ES	0.33	50	50	ENSMUST00000131237.8	ENSMUSG00000052446.18	Zfp961	chr8	protein_coding	zinc finger protein 961
chr8	72707522	72719638	+	72704947	72719638	A5SS	0.33	50	50	ENSMUST00000131237.8	ENSMUSG00000052446.18	Zfp961	chr8	protein_coding	zinc finger protein 961
chr8	72719760	72719944	+	72719764	72719944	A5SS	0.25	50	50	ENSMUST00000131237.8	ENSMUSG00000052446.18	Zfp961	chr8	protein_coding	zinc finger protein 961
chr8	72719834	72719944	+	72719764	72719944	A5SS	0.25	50	50	ENSMUST00000131237.8	ENSMUSG00000052446.18	Zfp961	chr8	protein_coding	zinc finger protein 961
chr8	72705004	72719944	+	72705004;72719760	72719638;72719944	ES	0.25	50	50	ENSMUST00000138304.8	ENSMUSG00000052446.18	Zfp961	chr8	protein_coding	zinc finger protein 961
chr8	72707522	72719638	+	72705004	72719638	A5SS	0.33	50	50	ENSMUST00000138304.8	ENSMUSG00000052446.18	Zfp961	chr8	protein_coding	zinc finger protein 961
chr8	72719764	72721743	+	72720004	72721743	A5SS&ES	0.33	50	50	ENSMUST00000138304.8	ENSMUSG00000052446.18	Zfp961	chr8	protein_coding	zinc finger protein 961
chr8	72719834	72719944	+	72719760	72719944	A5SS	0.25	50	50	ENSMUST00000138304.8	ENSMUSG00000052446.18	Zfp961	chr8	protein_coding	zinc finger protein 961
chr8	72705004	72721743	+	72705004;72719764	72719638;72721743	ES	0.33	50	50	ENSMUST00000136516.9	ENSMUSG00000052446.18	Zfp961	chr8	protein_coding	zinc finger protein 961
chr8	72705004;72720004	72719944;72721743	+	72705004;72719764	72719638;72721743	MXE	0.5	100	100	ENSMUST00000136516.9	ENSMUSG00000052446.18	Zfp961	chr8	protein_coding	zinc finger protein 961
chr8	72705004	72719944	+	72705004;72719834	72719638;72719944	ES	0.25	50	50	ENSMUST00000145256.8	ENSMUSG00000052446.18	Zfp961	chr8	protein_coding	zinc finger protein 961
chr8	72705004	72719944	+	72705004;72719764	72719638;72719944	ES	0.25	50	50	ENSMUST00000109997.10	ENSMUSG00000052446.18	Zfp961	chr8	protein_coding	zinc finger protein 961
chr8	72705004	72721743	+	72705004;72720004	72719944;72721743	ES	0.33	50	50	ENSMUST00000139781.8	ENSMUSG00000052446.18	Zfp961	chr8	protein_coding	zinc finger protein 961
chr8	72705004	72746692	+	72705004	72721743	3pMXE	0.25	50	50	ENSMUST00000144807.2	ENSMUSG00000052446.18	Zfp961	chr8	protein_coding	zinc finger protein 961
chr8	72705004;72720004	72719638;72721743	+	72705004	72721743	cassetteExon	0.5	100	100	ENSMUST00000144807.2	ENSMUSG00000052446.18	Zfp961	chr8	protein_coding	zinc finger protein 961
chr8	72705004	72719638	+	72705004	72746692	A3SS	0.25	50	50	ENSMUST00000136878.3	ENSMUSG00000052446.18	Zfp961	chr8	protein_coding	zinc finger protein 961
chr8	72705004	72719944	+	72705004	72746692	A3SS	0.25	50	50	ENSMUST00000136878.3	ENSMUSG00000052446.18	Zfp961	chr8	protein_coding	zinc finger protein 961
chr8	72743615	72743723	-	72743615	72743705	A5SS	0.5	50	50	ENSMUST00000003574.5	ENSMUSG00000003484.5	Cyp4f18	chr8	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 18
chr8	72839616	72853069	+	72837305	72853069	A5SS	0.5	50	50	ENSMUST00000213940.2	ENSMUSG00000061561.6	Olfr373	chr8	protein_coding	olfactory receptor 373
chr8	72861014	72870498	+	72861014	72863405	A3SS	0.5	50	50	ENSMUST00000210435.4	ENSMUSG00000046881.8	Olfr374	chr8	protein_coding	olfactory receptor 374
chr8	72889297	72892432	+	72888893	72892432	A5SS	0.33	50	50	ENSMUST00000123177.3	ENSMUSG00000031799.11	Tpm4	chr8	protein_coding	tropomyosin 4
chr8	72889764	72892432	+	72888893	72892432	A5SS	0.33	50	50	ENSMUST00000123177.3	ENSMUSG00000031799.11	Tpm4	chr8	protein_coding	tropomyosin 4
chr8	72889764	72892432	+	72889297	72892432	A5SS	0.33	50	50	ENSMUST00000003575.11	ENSMUSG00000031799.11	Tpm4	chr8	protein_coding	tropomyosin 4
chr8	72915256	72922271	+	72915326	72922271	A5SS	0.5	50	50	ENSMUST00000003121.9	ENSMUSG00000003037.17	Rab8a	chr8	protein_coding	RAB8A, member RAS oncogene family
chr8	72994087;72995782	72995568;73000483	+	72994087	73000483	cassetteExon	0.5	100	100	ENSMUST00000003117.15	ENSMUSG00000003033.16	Ap1m1	chr8	protein_coding	adaptor-related protein complex AP-1, mu subunit 1
chr8	72994087	73000497	+	72994087	73000483	A3SS	0.33	50	50	ENSMUST00000003117.15	ENSMUSG00000003033.16	Ap1m1	chr8	protein_coding	adaptor-related protein complex AP-1, mu subunit 1
chr8	73000639	73002933	+	73000639	73002957	A3SS	0.5	50	50	ENSMUST00000003117.15	ENSMUSG00000003033.16	Ap1m1	chr8	protein_coding	adaptor-related protein complex AP-1, mu subunit 1
chr8	72994097	73000483	+	72994087	73000483	A5SS	0.25	50	50	ENSMUST00000003117.15	ENSMUSG00000003033.16	Ap1m1	chr8	protein_coding	adaptor-related protein complex AP-1, mu subunit 1
chr8	72994311	73000483	+	72994087	73000483	A5SS	0.25	50	50	ENSMUST00000003117.15	ENSMUSG00000003033.16	Ap1m1	chr8	protein_coding	adaptor-related protein complex AP-1, mu subunit 1
chr8	72994087	72995568	+	72994087	73000497	A3SS	0.33	50	50	ENSMUST00000212708.2	ENSMUSG00000003033.16	Ap1m1	chr8	protein_coding	adaptor-related protein complex AP-1, mu subunit 1
chr8	72994311	73000483	+	72994097	73000483	A5SS	0.25	50	50	ENSMUST00000212940.2	ENSMUSG00000003033.16	Ap1m1	chr8	protein_coding	adaptor-related protein complex AP-1, mu subunit 1
chr8	72995782	73000483	+	72994097	73000483	A5SS	0.25	50	50	ENSMUST00000212940.2	ENSMUSG00000003033.16	Ap1m1	chr8	protein_coding	adaptor-related protein complex AP-1, mu subunit 1
chr8	72994311	73000483	+	72995782	73000483	A5SS&ES	0.25	50	50	ENSMUST00000145213.8	ENSMUSG00000003033.16	Ap1m1	chr8	protein_coding	adaptor-related protein complex AP-1, mu subunit 1
chr8	73100015	73121748	-	73100015;73112289	73112157;73121748	ES	0.33	50	50	ENSMUST00000163643.3	ENSMUSG00000006276.11	Eps15l1	chr8	protein_coding	epidermal growth factor receptor pathway substrate 15-like 1
chr8	73127790	73132928	-	73127790	73132835	A5SS	0.5	50	50	ENSMUST00000163643.3	ENSMUSG00000006276.11	Eps15l1	chr8	protein_coding	epidermal growth factor receptor pathway substrate 15-like 1
chr8	73095368;73100015	73099810;73121748	-	73095368	73121748	cassetteExon	0.5	100	100	ENSMUST00000212121.2	ENSMUSG00000006276.11	Eps15l1	chr8	protein_coding	epidermal growth factor receptor pathway substrate 15-like 1
chr8	73112289	73121748	-	73095368	73121748	A3SS	0.33	50	50	ENSMUST00000212121.2	ENSMUSG00000006276.11	Eps15l1	chr8	protein_coding	epidermal growth factor receptor pathway substrate 15-like 1
chr8	73095368	73121748	-	73100015	73121748	3pMXE	0.33	50	50	ENSMUST00000212257.2	ENSMUSG00000006276.11	Eps15l1	chr8	protein_coding	epidermal growth factor receptor pathway substrate 15-like 1
chr8	73100015	73121748	-	73112289	73121748	3pMXE	0.33	50	50	ENSMUST00000212950.2	ENSMUSG00000006276.11	Eps15l1	chr8	protein_coding	epidermal growth factor receptor pathway substrate 15-like 1
chr8	73188728	73188808	-	73188728	73192276	A5SS	0.5	50	50	ENSMUST00000019876.12	ENSMUSG00000019732.15	Calr3	chr8	protein_coding	calreticulin 3
chr8	73205276	73209060	+	73205276	73208958	A3SS	0.5	50	50	ENSMUST00000064853.13	ENSMUSG00000052794.14	1700030K09Rik	chr8	protein_coding	RIKEN cDNA 1700030K09 gene
chr8	73222330	73223708	-	73222363	73223708	A3SS	0.5	50	50	ENSMUST00000079510.6	ENSMUSG00000052488.8	Cherp	chr8	protein_coding	calcium homeostasis endoplasmic reticulum protein
chr8	73228624	73228902	-	73228629	73228902	A3SS	0.5	50	50	ENSMUST00000079510.6	ENSMUSG00000052488.8	Cherp	chr8	protein_coding	calcium homeostasis endoplasmic reticulum protein
chr8	73335116;73338661	73338544;73339706	+	73335116	73339706	cassetteExon	0.5	100	100	ENSMUST00000212763.2	ENSMUSG00000031791.9	Tmem38a	chr8	protein_coding	transmembrane protein 38A
chr8	73333563	73335029	+	73333563	73333804	A3SS&ES	0.5	50	50	ENSMUST00000212763.2	ENSMUSG00000031791.9	Tmem38a	chr8	protein_coding	transmembrane protein 38A
chr8	73333988	73335029	+	73333988	73335064	A3SS	0.5	50	50	ENSMUST00000212763.2	ENSMUSG00000031791.9	Tmem38a	chr8	protein_coding	transmembrane protein 38A
chr8	73333563	73335029	+	73333563;73333988	73333804;73335029	ES	0.5	50	50	ENSMUST00000034244.9	ENSMUSG00000031791.9	Tmem38a	chr8	protein_coding	transmembrane protein 38A
chr8	73383805	73393238	+	73383805;73389072	73388775;73393238	ES	0.5	50	50	ENSMUST00000161386.8	ENSMUSG00000048148.19	Nwd1	chr8	protein_coding	NACHT and WD repeat domain containing 1
chr8	73377157	73380114	+	73373637	73380114	A5SS	0.5	50	50	ENSMUST00000161386.8	ENSMUSG00000048148.19	Nwd1	chr8	protein_coding	NACHT and WD repeat domain containing 1
chr8	73429601	73431589	+	73429601	73431463	A3SS	0.5	50	50	ENSMUST00000093427.11	ENSMUSG00000048148.19	Nwd1	chr8	protein_coding	NACHT and WD repeat domain containing 1
chr8	73431696	73434015	+	73431739	73434015	A5SS	0.5	50	50	ENSMUST00000093427.11	ENSMUSG00000048148.19	Nwd1	chr8	protein_coding	NACHT and WD repeat domain containing 1
chr8	73466116	73468102	+	73466116	73466358	3pMXE	0.5	50	50	ENSMUST00000109950.5	ENSMUSG00000031622.17	Sin3b	chr8	protein_coding	transcriptional regulator, SIN3B (yeast)
chr8	73450246	73450672	+	73450036	73450672	A5SS	0.5	50	50	ENSMUST00000109950.5	ENSMUSG00000031622.17	Sin3b	chr8	protein_coding	transcriptional regulator, SIN3B (yeast)
chr8	73940940;74066914	74066822;74079094	-	73940940	74079094	cassetteExon	0.5	100	100	ENSMUST00000004497.11	ENSMUSG00000004383.19	Large1	chr8	protein_coding	LARGE xylosyl- and glucuronyltransferase 1
chr8	73940940	74079100	-	73940940	74079094	A5SS	0.33	50	50	ENSMUST00000004497.11	ENSMUSG00000004383.19	Large1	chr8	protein_coding	LARGE xylosyl- and glucuronyltransferase 1
chr8	73940940	74066822	-	73940940	74079100	A5SS	0.33	50	50	ENSMUST00000119826.7	ENSMUSG00000004383.19	Large1	chr8	protein_coding	LARGE xylosyl- and glucuronyltransferase 1
chr8	75512954	75560079	-	75555048	75560079	A3SS&ES	0.5	50	50	ENSMUST00000127757.8	ENSMUSG00000079011.10	Gm11033	chr8	lncRNA	predicted gene 11033
chr8	75555048	75560362	-	75555048	75560079	A5SS&ES	0.5	50	50	ENSMUST00000127757.8	ENSMUSG00000079011.10	Gm11033	chr8	lncRNA	predicted gene 11033
chr8	75560151	75560476	-	75560151	75560480	A5SS	0.5	50	50	ENSMUST00000127757.8	ENSMUSG00000079011.10	Gm11033	chr8	lncRNA	predicted gene 11033
chr8	75618502	75619296	+	75618543	75619296	A5SS	0.5	50	50	ENSMUST00000034034.10	ENSMUSG00000031621.10	Isx	chr8	protein_coding	intestine specific homeobox
chr8	75720377	75726188	+	75720377;75725566	75725463;75726188	ES	0.5	50	50	ENSMUST00000041759.14	ENSMUSG00000034518.15	Hmgxb4	chr8	protein_coding	HMG box domain containing 4
chr8	75726519;75726741	75726627;75727278	+	75726519	75727278	cassetteExon	0.5	100	100	ENSMUST00000041759.14	ENSMUSG00000034518.15	Hmgxb4	chr8	protein_coding	HMG box domain containing 4
chr8	75743034	75746872	+	75728212	75746872	A5SS	0.5	50	50	ENSMUST00000041759.14	ENSMUSG00000034518.15	Hmgxb4	chr8	protein_coding	HMG box domain containing 4
chr8	75720377	75726188	+	75720377	75725463	3pMXE	0.5	50	50	ENSMUST00000134126.2	ENSMUSG00000034518.15	Hmgxb4	chr8	protein_coding	HMG box domain containing 4
chr8	75774705	75778136	+	75774705;75776896	75776818;75778136	ES	0.33	50	50	ENSMUST00000165630.3	ENSMUSG00000042870.16	Tom1	chr8	protein_coding	target of myb1 trafficking protein
chr8	75776896	75778551	+	75776896;75778285	75778136;75778551	ES	0.33	50	50	ENSMUST00000165630.3	ENSMUSG00000042870.16	Tom1	chr8	protein_coding	target of myb1 trafficking protein
chr8	75785534;75785888	75785817;75787061	+	75785534	75787061	cassetteExon	0.5	100	100	ENSMUST00000165630.3	ENSMUSG00000042870.16	Tom1	chr8	protein_coding	target of myb1 trafficking protein
chr8	75781020	75781205	+	75778924	75781205	A5SS	0.33	50	50	ENSMUST00000165630.3	ENSMUSG00000042870.16	Tom1	chr8	protein_coding	target of myb1 trafficking protein
chr8	75760455;75778285	75778136;75778551	+	75760455	75778551	cassetteExon	0.5	100	100	ENSMUST00000212651.2	ENSMUSG00000042870.16	Tom1	chr8	protein_coding	target of myb1 trafficking protein
chr8	75760455	75774621	+	75760455	75778551	A3SS	0.25	50	50	ENSMUST00000212651.2	ENSMUSG00000042870.16	Tom1	chr8	protein_coding	target of myb1 trafficking protein
chr8	75776896	75778551	+	75760455	75778551	A5SS	0.33	50	50	ENSMUST00000212651.2	ENSMUSG00000042870.16	Tom1	chr8	protein_coding	target of myb1 trafficking protein
chr8	75760455	75778136	+	75760455;75774705	75774621;75778136	ES	0.33	50	50	ENSMUST00000212564.2	ENSMUSG00000042870.16	Tom1	chr8	protein_coding	target of myb1 trafficking protein
chr8	75774705;75776896	75776818;75778551	+	75774705;75778285	75778136;75778551	MXE	0.5	100	100	ENSMUST00000212564.2	ENSMUSG00000042870.16	Tom1	chr8	protein_coding	target of myb1 trafficking protein
chr8	75760455;75778924	75778551;75781205	+	75760455	75781205	cassetteExon	0.5	100	100	ENSMUST00000212388.2	ENSMUSG00000042870.16	Tom1	chr8	protein_coding	target of myb1 trafficking protein
chr8	75760455	75774621	+	75760455	75781205	A3SS	0.25	50	50	ENSMUST00000212388.2	ENSMUSG00000042870.16	Tom1	chr8	protein_coding	target of myb1 trafficking protein
chr8	75760455	75778136	+	75760455	75781205	A3SS	0.25	50	50	ENSMUST00000212388.2	ENSMUSG00000042870.16	Tom1	chr8	protein_coding	target of myb1 trafficking protein
chr8	75781020	75781205	+	75760455	75781205	A5SS	0.33	50	50	ENSMUST00000212388.2	ENSMUSG00000042870.16	Tom1	chr8	protein_coding	target of myb1 trafficking protein
chr8	75760455;75778285	75778136;75778551	+	75760455;75776896	75774621;75778551	MXE	0.5	100	100	ENSMUST00000212299.2	ENSMUSG00000042870.16	Tom1	chr8	protein_coding	target of myb1 trafficking protein
chr8	75776896	75778136	+	75760455	75778136	A5SS	0.33	50	50	ENSMUST00000211869.2	ENSMUSG00000042870.16	Tom1	chr8	protein_coding	target of myb1 trafficking protein
chr8	75776896	75778551	+	75778285	75778551	A5SS&ES	0.33	50	50	ENSMUST00000211869.2	ENSMUSG00000042870.16	Tom1	chr8	protein_coding	target of myb1 trafficking protein
chr8	75836225	75836328	+	75836249	75836328	A5SS	0.5	50	50	ENSMUST00000164309.3	ENSMUSG00000005410.7	Mcm5	chr8	protein_coding	minichromosome maintenance complex component 5
chr8	75941495	75945164	+	75940706	75945164	A5SS	0.5	50	50	ENSMUST00000139848.8	ENSMUSG00000034472.14	Rasd2	chr8	protein_coding	RASD family, member 2
chr8	76175634;76189354	76189237;76281471	+	76175634	76281471	cassetteExon	0.5	100	100	ENSMUST00000034033.15	ENSMUSG00000031620.17	Iqcm	chr8	protein_coding	IQ motif containing M
chr8	76192518	76281471	+	76175634	76281471	A5SS	0.33	50	50	ENSMUST00000034033.15	ENSMUSG00000031620.17	Iqcm	chr8	protein_coding	IQ motif containing M
chr8	76189354;76192518	76192493;76281471	+	76189354	76281471	cassetteExon	0.5	100	100	ENSMUST00000212704.2	ENSMUSG00000031620.17	Iqcm	chr8	protein_coding	IQ motif containing M
chr8	77568958	77626734	-	77568958	77626522	5pMXE	0.5	50	50	ENSMUST00000143324.2	ENSMUSG00000074235.5	Gm10649	chr8	lncRNA	predicted gene 10649
chr8	77568958	77626734	-	77477183	77626734	A3SS	0.5	50	50	ENSMUST00000136538.2	ENSMUSG00000074235.5	Gm10649	chr8	lncRNA	predicted gene 10649
chr8	77626888	77634899	+	77626195	77634899	A5SS	0.25	50	50	ENSMUST00000143284.2	ENSMUSG00000031618.14	Nr3c2	chr8	protein_coding	nuclear receptor subfamily 3, group C, member 2
chr8	77629168	77634899	+	77626195	77634899	A5SS	0.25	50	50	ENSMUST00000143284.2	ENSMUSG00000031618.14	Nr3c2	chr8	protein_coding	nuclear receptor subfamily 3, group C, member 2
chr8	77633252	77634899	+	77626195	77634899	A5SS	0.25	50	50	ENSMUST00000143284.2	ENSMUSG00000031618.14	Nr3c2	chr8	protein_coding	nuclear receptor subfamily 3, group C, member 2
chr8	77881947	77914149	+	77881947;77912743	77912405;77914149	ES	0.5	50	50	ENSMUST00000109913.9	ENSMUSG00000031618.14	Nr3c2	chr8	protein_coding	nuclear receptor subfamily 3, group C, member 2
chr8	77629168	77634899	+	77626888	77634899	A5SS	0.25	50	50	ENSMUST00000109913.9	ENSMUSG00000031618.14	Nr3c2	chr8	protein_coding	nuclear receptor subfamily 3, group C, member 2
chr8	77633252	77634899	+	77626888	77634899	A5SS	0.25	50	50	ENSMUST00000109913.9	ENSMUSG00000031618.14	Nr3c2	chr8	protein_coding	nuclear receptor subfamily 3, group C, member 2
chr8	77812307	77881831	+	77812295	77881831	A5SS	0.33	50	50	ENSMUST00000109913.9	ENSMUSG00000031618.14	Nr3c2	chr8	protein_coding	nuclear receptor subfamily 3, group C, member 2
chr8	77854777	77881831	+	77812295	77881831	A5SS	0.33	50	50	ENSMUST00000109913.9	ENSMUSG00000031618.14	Nr3c2	chr8	protein_coding	nuclear receptor subfamily 3, group C, member 2
chr8	77629168;77633252	77633222;77634899	+	77629168	77634899	cassetteExon	0.5	100	100	ENSMUST00000148106.8	ENSMUSG00000031618.14	Nr3c2	chr8	protein_coding	nuclear receptor subfamily 3, group C, member 2
chr8	77881947;77914293	77914149;77937273	+	77881947	77937273	cassetteExon	0.5	100	100	ENSMUST00000148106.8	ENSMUSG00000031618.14	Nr3c2	chr8	protein_coding	nuclear receptor subfamily 3, group C, member 2
chr8	77881947	77912405	+	77881947	77937273	A3SS	0.33	50	50	ENSMUST00000148106.8	ENSMUSG00000031618.14	Nr3c2	chr8	protein_coding	nuclear receptor subfamily 3, group C, member 2
chr8	77854777	77881831	+	77812307	77881831	A5SS	0.33	50	50	ENSMUST00000034031.6	ENSMUSG00000031618.14	Nr3c2	chr8	protein_coding	nuclear receptor subfamily 3, group C, member 2
chr8	77881947	77914149	+	77881947	77912405	3pMXE	0.33	50	50	ENSMUST00000126697.2	ENSMUSG00000031618.14	Nr3c2	chr8	protein_coding	nuclear receptor subfamily 3, group C, member 2
chr8	77984046	78003777	-	77984046;77985838	77985686;78003777	ES	0.5	50	50	ENSMUST00000076316.6	ENSMUSG00000037148.9	Arhgap10	chr8	protein_coding	Rho GTPase activating protein 10
chr8	78091789	78111380	-	78091789;78109419	78109354;78111380	ES	0.5	50	50	ENSMUST00000076316.6	ENSMUSG00000037148.9	Arhgap10	chr8	protein_coding	Rho GTPase activating protein 10
chr8	78287603	78289078	+	78287603	78289043	A3SS	0.5	50	50	ENSMUST00000056237.15	ENSMUSG00000037134.18	Prmt9	chr8	protein_coding	protein arginine methyltransferase 9
chr8	78336948	78337112	-	78336948	78337291	A5SS	0.5	50	50	ENSMUST00000152168.8	ENSMUSG00000031617.17	Tmem184c	chr8	protein_coding	transmembrane protein 184C
chr8	78385996	78386351	+	78379109	78386351	A5SS	0.5	50	50	ENSMUST00000139140.8	ENSMUSG00000086451.9	4933431K23Rik	chr8	lncRNA	RIKEN cDNA 4933431K23 gene
chr8	78394593	78395776	+	78394593	78430763	A3SS	0.5	50	50	ENSMUST00000153937.2	ENSMUSG00000086451.9	4933431K23Rik	chr8	lncRNA	RIKEN cDNA 4933431K23 gene
chr8	78453160	78482016	+	78430855	78482016	A5SS	0.5	50	50	ENSMUST00000153937.2	ENSMUSG00000086451.9	4933431K23Rik	chr8	lncRNA	RIKEN cDNA 4933431K23 gene
chr8	78491180	78493904	+	78484776	78493904	A5SS	0.5	50	50	ENSMUST00000153937.2	ENSMUSG00000086451.9	4933431K23Rik	chr8	lncRNA	RIKEN cDNA 4933431K23 gene
chr8	78775585	78777203	+	78774047	78777203	A5SS	0.5	50	50	ENSMUST00000211010.2	ENSMUSG00000110382.2	Gm29895	chr8	lncRNA	predicted gene, 29895
chr8	78940073;78940312	78940234;78940637	+	78940073	78940637	cassetteExon	0.5	100	100	ENSMUST00000117845.8	ENSMUSG00000037101.17	Ttc29	chr8	protein_coding	tetratricopeptide repeat domain 29
chr8	78940700	78944494	+	78940700	78944534	A3SS	0.5	50	50	ENSMUST00000117845.8	ENSMUSG00000037101.17	Ttc29	chr8	protein_coding	tetratricopeptide repeat domain 29
chr8	78940177	78940637	+	78940073	78940637	A5SS	0.33	50	50	ENSMUST00000117845.8	ENSMUSG00000037101.17	Ttc29	chr8	protein_coding	tetratricopeptide repeat domain 29
chr8	78940177	78940637	+	78940312	78940637	A5SS&ES	0.33	50	50	ENSMUST00000137424.8	ENSMUSG00000037101.17	Ttc29	chr8	protein_coding	tetratricopeptide repeat domain 29
chr8	79118106	79119700	+	79060411	79119700	A5SS	0.5	50	50	ENSMUST00000049395.15	ENSMUSG00000037101.17	Ttc29	chr8	protein_coding	tetratricopeptide repeat domain 29
chr8	78940073	78940637	+	78940312	78940637	A5SS	0.33	50	50	ENSMUST00000156432.2	ENSMUSG00000037101.17	Ttc29	chr8	protein_coding	tetratricopeptide repeat domain 29
chr8	79233446	79235428	-	79233492	79235428	A3SS	0.5	50	50	ENSMUST00000049245.10	ENSMUSG00000037070.11	Rbmxl1	chr8	protein_coding	RNA binding motif protein, X-linked like-1
chr8	79236303	79251791	+	79236303;79242297	79242215;79251791	ES	0.5	50	50	ENSMUST00000211332.2	ENSMUSG00000031684.12	Slc10a7	chr8	protein_coding	solute carrier family 10 (sodium/bile acid cotransporter family), member 7
chr8	79251927	79305348	+	79251927;79257787	79257712;79305348	ES	0.33	50	50	ENSMUST00000211332.2	ENSMUSG00000031684.12	Slc10a7	chr8	protein_coding	solute carrier family 10 (sodium/bile acid cotransporter family), member 7
chr8	79389651	79423795	+	79389651;79413297	79413214;79423795	ES	0.5	50	50	ENSMUST00000211332.2	ENSMUSG00000031684.12	Slc10a7	chr8	protein_coding	solute carrier family 10 (sodium/bile acid cotransporter family), member 7
chr8	79433577	79454810	+	79433577	79436946	3pMXE	0.33	50	50	ENSMUST00000211332.2	ENSMUSG00000031684.12	Slc10a7	chr8	protein_coding	solute carrier family 10 (sodium/bile acid cotransporter family), member 7
chr8	79433577	79456247	+	79433577	79436946	3pMXE	0.33	50	50	ENSMUST00000211332.2	ENSMUSG00000031684.12	Slc10a7	chr8	protein_coding	solute carrier family 10 (sodium/bile acid cotransporter family), member 7
chr8	79305386	79374641	+	79305386	79389616	A3SS	0.5	50	50	ENSMUST00000211332.2	ENSMUSG00000031684.12	Slc10a7	chr8	protein_coding	solute carrier family 10 (sodium/bile acid cotransporter family), member 7
chr8	79304777	79305348	+	79257787	79305348	A5SS	0.33	50	50	ENSMUST00000211332.2	ENSMUSG00000031684.12	Slc10a7	chr8	protein_coding	solute carrier family 10 (sodium/bile acid cotransporter family), member 7
chr8	79315662	79389616	+	79305386	79389616	A5SS	0.5	50	50	ENSMUST00000211332.2	ENSMUSG00000031684.12	Slc10a7	chr8	protein_coding	solute carrier family 10 (sodium/bile acid cotransporter family), member 7
chr8	79423960;79425200	79425149;79456247	+	79423960	79456247	cassetteExon	0.5	100	100	ENSMUST00000209490.2	ENSMUSG00000031684.12	Slc10a7	chr8	protein_coding	solute carrier family 10 (sodium/bile acid cotransporter family), member 7
chr8	79433577	79456247	+	79423960	79456247	A5SS	0.33	50	50	ENSMUST00000209490.2	ENSMUSG00000031684.12	Slc10a7	chr8	protein_coding	solute carrier family 10 (sodium/bile acid cotransporter family), member 7
chr8	79425200	79456247	+	79425200;79433577	79433504;79456247	ES	0.33	50	50	ENSMUST00000034111.10	ENSMUSG00000031684.12	Slc10a7	chr8	protein_coding	solute carrier family 10 (sodium/bile acid cotransporter family), member 7
chr8	79433577	79454810	+	79433577	79456247	A3SS	0.33	50	50	ENSMUST00000034111.10	ENSMUSG00000031684.12	Slc10a7	chr8	protein_coding	solute carrier family 10 (sodium/bile acid cotransporter family), member 7
chr8	79304777	79305348	+	79251927	79305348	A5SS	0.33	50	50	ENSMUST00000210630.2	ENSMUSG00000031684.12	Slc10a7	chr8	protein_coding	solute carrier family 10 (sodium/bile acid cotransporter family), member 7
chr8	79389651	79423795	+	79389651	79413214	3pMXE	0.5	50	50	ENSMUST00000211315.2	ENSMUSG00000031684.12	Slc10a7	chr8	protein_coding	solute carrier family 10 (sodium/bile acid cotransporter family), member 7
chr8	79539709	79547677	-	79539709;79546714	79546616;79547677	ES	0.5	50	50	ENSMUST00000130325.8	ENSMUSG00000031683.17	Lsm6	chr8	protein_coding	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
chr8	79912982	79916296	+	79912982;79914810	79914778;79916296	ES	0.33	50	50	ENSMUST00000098614.9	ENSMUSG00000071064.16	Zfp827	chr8	protein_coding	zinc finger protein 827
chr8	79902599	79905519	+	79902599	79905537	A3SS	0.5	50	50	ENSMUST00000098614.9	ENSMUSG00000071064.16	Zfp827	chr8	protein_coding	zinc finger protein 827
chr8	79912982	79914783	+	79912982	79914778	A3SS	0.33	50	50	ENSMUST00000098614.9	ENSMUSG00000071064.16	Zfp827	chr8	protein_coding	zinc finger protein 827
chr8	79912987	79914778	+	79912982	79914778	A5SS	0.5	50	50	ENSMUST00000098614.9	ENSMUSG00000071064.16	Zfp827	chr8	protein_coding	zinc finger protein 827
chr8	79912987	79916296	+	79914810	79916296	A5SS&ES	0.33	50	50	ENSMUST00000098614.9	ENSMUSG00000071064.16	Zfp827	chr8	protein_coding	zinc finger protein 827
chr8	79912987	79916296	+	79912987;79914810	79914778;79916296	ES	0.33	50	50	ENSMUST00000119254.8	ENSMUSG00000071064.16	Zfp827	chr8	protein_coding	zinc finger protein 827
chr8	79912982	79916296	+	79914810	79916296	A5SS&ES	0.33	50	50	ENSMUST00000119254.8	ENSMUSG00000071064.16	Zfp827	chr8	protein_coding	zinc finger protein 827
chr8	79912982;79914810	79914783;79916296	+	79912982	79916296	cassetteExon	0.5	100	100	ENSMUST00000238669.2	ENSMUSG00000071064.16	Zfp827	chr8	protein_coding	zinc finger protein 827
chr8	79912987	79916296	+	79912982	79916296	A5SS	0.33	50	50	ENSMUST00000238669.2	ENSMUSG00000071064.16	Zfp827	chr8	protein_coding	zinc finger protein 827
chr8	79949987	79955946	-	79946934	79955946	A3SS	0.5	50	50	ENSMUST00000034109.6	ENSMUSG00000031682.6	1700011L22Rik	chr8	protein_coding	RIKEN cDNA 1700011L22 gene
chr8	80004953	80007810	-	80004953	80007806	A5SS	0.5	50	50	ENSMUST00000048718.4	ENSMUSG00000037022.4	Mmaa	chr8	protein_coding	methylmalonic aciduria (cobalamin deficiency) type A
chr8	80008283	80010838	-	80008283	80021543	A5SS	0.5	50	50	ENSMUST00000048718.4	ENSMUSG00000037022.4	Mmaa	chr8	protein_coding	methylmalonic aciduria (cobalamin deficiency) type A
chr8	80022136	80032232	+	80022136;80023280	80023241;80032232	ES	0.5	50	50	ENSMUST00000181030.3	ENSMUSG00000097174.3	Gm4890	chr8	lncRNA	predicted gene 4890
chr8	80082625	80082841	-	80080075	80082841	A3SS	0.5	50	50	ENSMUST00000066091.14	ENSMUSG00000031681.17	Smad1	chr8	protein_coding	SMAD family member 1
chr8	80224355	80225867	+	80218320	80225867	A5SS	0.5	50	50	ENSMUST00000211703.2	ENSMUSG00000109774.2	Gm45602	chr8	lncRNA	predicted gene 45602
chr8	80386091	80387670	+	80386091	80387667	A3SS	0.5	50	50	ENSMUST00000173078.8	ENSMUSG00000036990.14	Otud4	chr8	protein_coding	OTU domain containing 4
chr8	80391646	80393345	+	80391772	80393345	A5SS	0.5	50	50	ENSMUST00000173078.8	ENSMUSG00000036990.14	Otud4	chr8	protein_coding	OTU domain containing 4
chr8	80492013	80501561	+	80455879	80501561	A5SS	0.5	50	50	ENSMUST00000048147.9	ENSMUSG00000036977.9	Anapc10	chr8	protein_coding	anaphase promoting complex subunit 10
chr8	81453346	81454245	-	81452995	81454245	A3SS	0.5	50	50	ENSMUST00000043359.9	ENSMUSG00000031715.15	Smarca5	chr8	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
chr8	81501656	81511256	-	81501656;81502879	81502790;81511256	ES	0.5	50	50	ENSMUST00000210676.2	ENSMUSG00000031714.10	Gab1	chr8	protein_coding	growth factor receptor bound protein 2-associated protein 1
chr8	81527024	81557417	-	81527024	81606161	A5SS	0.5	50	50	ENSMUST00000210676.2	ENSMUSG00000031714.10	Gab1	chr8	protein_coding	growth factor receptor bound protein 2-associated protein 1
chr8	81727141	81727682	-	81722469	81727682	A3SS	0.5	50	50	ENSMUST00000042724.8	ENSMUSG00000038250.10	Usp38	chr8	protein_coding	ubiquitin specific peptidase 38
chr8	81742061	81764264	+	81741582	81764264	A5SS	0.5	50	50	ENSMUST00000123595.8	ENSMUSG00000037982.17	Gm9725	chr8	lncRNA	predicted gene 9725
chr8	82441893;82463546	82463475;82467927	+	82441893	82467927	cassetteExon	0.5	100	100	ENSMUST00000172167.9	ENSMUSG00000037940.18	Inpp4b	chr8	protein_coding	inositol polyphosphate-4-phosphatase, type II
chr8	82199448	82467937	+	82199448	82441830	A3SS&ES	0.5	50	50	ENSMUST00000172167.9	ENSMUSG00000037940.18	Inpp4b	chr8	protein_coding	inositol polyphosphate-4-phosphatase, type II
chr8	82470443	82497437	+	82470443;82494841	82494723;82497437	ES	0.5	50	50	ENSMUST00000213285.2	ENSMUSG00000037940.18	Inpp4b	chr8	protein_coding	inositol polyphosphate-4-phosphatase, type II
chr8	82497553	82583321	+	82497553;82571135	82571085;82583321	ES	0.5	50	50	ENSMUST00000213285.2	ENSMUSG00000037940.18	Inpp4b	chr8	protein_coding	inositol polyphosphate-4-phosphatase, type II
chr8	82497553	82538427	+	82497553	82571085	A3SS	0.33	50	50	ENSMUST00000213285.2	ENSMUSG00000037940.18	Inpp4b	chr8	protein_coding	inositol polyphosphate-4-phosphatase, type II
chr8	82494541	82494723	+	82470443	82494723	A5SS	0.5	50	50	ENSMUST00000213285.2	ENSMUSG00000037940.18	Inpp4b	chr8	protein_coding	inositol polyphosphate-4-phosphatase, type II
chr8	82499767	82571085	+	82497553	82571085	A5SS	0.5	50	50	ENSMUST00000213285.2	ENSMUSG00000037940.18	Inpp4b	chr8	protein_coding	inositol polyphosphate-4-phosphatase, type II
chr8	82798464	82849232	+	82798464	82847846	3pMXE	0.5	50	50	ENSMUST00000217122.2	ENSMUSG00000037940.18	Inpp4b	chr8	protein_coding	inositol polyphosphate-4-phosphatase, type II
chr8	82497553	82538427	+	82497553	82583321	A3SS	0.33	50	50	ENSMUST00000042529.14	ENSMUSG00000037940.18	Inpp4b	chr8	protein_coding	inositol polyphosphate-4-phosphatase, type II
chr8	82497553	82583321	+	82571135	82583321	5pMXE	0.5	50	50	ENSMUST00000216387.2	ENSMUSG00000037940.18	Inpp4b	chr8	protein_coding	inositol polyphosphate-4-phosphatase, type II
chr8	82393110	82393695	-	82393110	82393636	A5SS	0.5	50	50	ENSMUST00000168243.2	ENSMUSG00000090732.2	4930579O11Rik	chr8	lncRNA	RIKEN cDNA 4930579O11 gene
chr8	82927811	82930203	-	82919063	82930203	A3SS	0.5	50	50	ENSMUST00000209515.2	ENSMUSG00000110045.2	Gm38590	chr8	lncRNA	predicted gene, 38590
chr8	82919063	82927245	-	82919063	82930203	A5SS	0.5	50	50	ENSMUST00000209515.2	ENSMUSG00000110045.2	Gm38590	chr8	lncRNA	predicted gene, 38590
chr8	83061235	83069868	-	83061235;83064239	83064195;83069868	ES	0.5	50	50	ENSMUST00000209363.2	ENSMUSG00000031712.11	Il15	chr8	protein_coding	interleukin 15
chr8	83069952;83070665	83070588;83071004	-	83069952	83071004	cassetteExon	0.5	100	100	ENSMUST00000209363.2	ENSMUSG00000031712.11	Il15	chr8	protein_coding	interleukin 15
chr8	83061187	83064195	-	83061235	83064195	A3SS	0.5	50	50	ENSMUST00000209363.2	ENSMUSG00000031712.11	Il15	chr8	protein_coding	interleukin 15
chr8	83072327	83128919	-	83072327	83106123	A5SS&ES	0.5	50	50	ENSMUST00000209363.2	ENSMUSG00000031712.11	Il15	chr8	protein_coding	interleukin 15
chr8	83106244	83125182	-	83106244	83128929	A5SS	0.25	50	50	ENSMUST00000209363.2	ENSMUSG00000031712.11	Il15	chr8	protein_coding	interleukin 15
chr8	83106244	83128274	-	83106244	83128929	A5SS	0.25	50	50	ENSMUST00000209363.2	ENSMUSG00000031712.11	Il15	chr8	protein_coding	interleukin 15
chr8	83106244	83128919	-	83106244	83128929	A5SS	0.25	50	50	ENSMUST00000209363.2	ENSMUSG00000031712.11	Il15	chr8	protein_coding	interleukin 15
chr8	83106244	83128919	-	83106244	83128274	5pMXE	0.25	50	50	ENSMUST00000209573.3	ENSMUSG00000031712.11	Il15	chr8	protein_coding	interleukin 15
chr8	83106244	83125182	-	83106244	83128274	A5SS	0.25	50	50	ENSMUST00000209573.3	ENSMUSG00000031712.11	Il15	chr8	protein_coding	interleukin 15
chr8	83072327	83128919	-	83072327;83106244	83106123;83128919	ES	0.5	50	50	ENSMUST00000034148.7	ENSMUSG00000031712.11	Il15	chr8	protein_coding	interleukin 15
chr8	83106244	83125182	-	83106244	83128919	A5SS	0.25	50	50	ENSMUST00000034148.7	ENSMUSG00000031712.11	Il15	chr8	protein_coding	interleukin 15
chr8	83061235	83069868	-	83064239	83069868	A3SS&ES	0.5	50	50	ENSMUST00000211565.2	ENSMUSG00000031712.11	Il15	chr8	protein_coding	interleukin 15
chr8	83069952	83071004	-	83070665	83071004	3pMXE	0.5	50	50	ENSMUST00000210094.2	ENSMUSG00000031712.11	Il15	chr8	protein_coding	interleukin 15
chr8	83072327	83128919	-	83106244	83128919	3pMXE	0.5	50	50	ENSMUST00000210472.2	ENSMUSG00000031712.11	Il15	chr8	protein_coding	interleukin 15
chr8	83497987	83499509	-	83496028	83499509	A3SS	0.5	50	50	ENSMUST00000211462.2	ENSMUSG00000031711.8	Zfp330	chr8	protein_coding	zinc finger protein 330
chr8	83496028	83497430	-	83496028	83499509	A5SS	0.5	50	50	ENSMUST00000211462.2	ENSMUSG00000031711.8	Zfp330	chr8	protein_coding	zinc finger protein 330
chr8	83591119	83630637	+	83591119	83716976	A3SS	0.5	50	50	ENSMUST00000078525.7	ENSMUSG00000047747.11	Rnf150	chr8	protein_coding	ring finger protein 150
chr8	83948185	83960109	+	83948185	83966460	A3SS	0.5	50	50	ENSMUST00000034145.11	ENSMUSG00000031709.16	Tbc1d9	chr8	protein_coding	TBC1 domain family, member 9
chr8	83963348	83966460	+	83948185	83966460	A5SS	0.5	50	50	ENSMUST00000034145.11	ENSMUSG00000031709.16	Tbc1d9	chr8	protein_coding	TBC1 domain family, member 9
chr8	84057887	84058979	-	84057887	84058984	A5SS	0.5	50	50	ENSMUST00000177594.8	ENSMUSG00000035151.13	Elmod2	chr8	protein_coding	ELMO/CED-12 domain containing 2
chr8	84116729	84122072	+	84116606	84122072	A5SS	0.5	50	50	ENSMUST00000002259.13	ENSMUSG00000002190.14	Clgn	chr8	protein_coding	calmegin
chr8	84164685	84184890	-	84164685	84169051	5pMXE	0.25	50	50	ENSMUST00000212473.2	ENSMUSG00000063253.12	Scoc	chr8	protein_coding	short coiled-coil protein
chr8	84157233;84164262	84164182;84164614	-	84157233	84164614	cassetteExon	0.5	100	100	ENSMUST00000212473.2	ENSMUSG00000063253.12	Scoc	chr8	protein_coding	short coiled-coil protein
chr8	84157233;84164265	84164182;84164614	-	84157233	84164614	cassetteExon	0.5	100	100	ENSMUST00000212473.2	ENSMUSG00000063253.12	Scoc	chr8	protein_coding	short coiled-coil protein
chr8	84164685	84164805	-	84164685	84169051	A5SS	0.25	50	50	ENSMUST00000212473.2	ENSMUSG00000063253.12	Scoc	chr8	protein_coding	short coiled-coil protein
chr8	84164685	84165759	-	84164685	84169051	A5SS	0.25	50	50	ENSMUST00000212473.2	ENSMUSG00000063253.12	Scoc	chr8	protein_coding	short coiled-coil protein
chr8	84162669	84164182	-	84157233	84164182	A3SS	0.5	50	50	ENSMUST00000212449.2	ENSMUSG00000063253.12	Scoc	chr8	protein_coding	short coiled-coil protein
chr8	84164262	84164614	-	84164265	84164614	A3SS	0.33	50	50	ENSMUST00000212449.2	ENSMUSG00000063253.12	Scoc	chr8	protein_coding	short coiled-coil protein
chr8	84164685	84164805	-	84164685	84184890	A5SS	0.25	50	50	ENSMUST00000081506.11	ENSMUSG00000063253.12	Scoc	chr8	protein_coding	short coiled-coil protein
chr8	84164685	84165759	-	84164685	84184890	A5SS	0.25	50	50	ENSMUST00000081506.11	ENSMUSG00000063253.12	Scoc	chr8	protein_coding	short coiled-coil protein
chr8	84164685	84165759	-	84164685	84164805	5pMXE	0.25	50	50	ENSMUST00000212905.2	ENSMUSG00000063253.12	Scoc	chr8	protein_coding	short coiled-coil protein
chr8	84157233	84164614	-	84164265	84164614	3pMXE	0.33	50	50	ENSMUST00000212871.2	ENSMUSG00000063253.12	Scoc	chr8	protein_coding	short coiled-coil protein
chr8	84262715	84267564	+	84262715	84267632	A3SS	0.5	50	50	ENSMUST00000214156.2	ENSMUSG00000047286.8	Olfr370	chr8	protein_coding	olfactory receptor 370
chr8	84299952	84300500	-	84299952;84300084	84300040;84300500	ES	0.5	50	50	ENSMUST00000238997.2	ENSMUSG00000031708.18	Tecr	chr8	protein_coding	trans-2,3-enoyl-CoA reductase
chr8	84299674	84299849	-	84299772	84299849	A3SS	0.5	50	50	ENSMUST00000238997.2	ENSMUSG00000031708.18	Tecr	chr8	protein_coding	trans-2,3-enoyl-CoA reductase
chr8	84299917	84301107	-	84300551	84301107	A3SS&ES	0.5	50	50	ENSMUST00000238997.2	ENSMUSG00000031708.18	Tecr	chr8	protein_coding	trans-2,3-enoyl-CoA reductase
chr8	84300084	84300338	-	84300084	84300500	A5SS	0.5	50	50	ENSMUST00000238997.2	ENSMUSG00000031708.18	Tecr	chr8	protein_coding	trans-2,3-enoyl-CoA reductase
chr8	84301157	84334520	-	84301157	84320969	5pMXE	0.33	50	50	ENSMUST00000163837.2	ENSMUSG00000031708.18	Tecr	chr8	protein_coding	trans-2,3-enoyl-CoA reductase
chr8	84301157;84316930	84316812;84320969	-	84301157	84320969	cassetteExon	0.5	100	100	ENSMUST00000163837.2	ENSMUSG00000031708.18	Tecr	chr8	protein_coding	trans-2,3-enoyl-CoA reductase
chr8	84299952	84300500	-	84299952	84300040	A5SS&ES	0.5	50	50	ENSMUST00000163837.2	ENSMUSG00000031708.18	Tecr	chr8	protein_coding	trans-2,3-enoyl-CoA reductase
chr8	84301157	84316812	-	84301157	84334520	A5SS	0.33	50	50	ENSMUST00000211972.2	ENSMUSG00000031708.18	Tecr	chr8	protein_coding	trans-2,3-enoyl-CoA reductase
chr8	84335389	84336443	+	84335171	84336443	A5SS	0.5	50	50	ENSMUST00000005620.10	ENSMUSG00000005483.11	Dnajb1	chr8	protein_coding	DnaJ heat shock protein family (Hsp40) member B1
chr8	84379366	84388584	+	84379366;84387909	84387588;84388584	ES	0.5	50	50	ENSMUST00000019577.10	ENSMUSG00000019433.10	Gipc1	chr8	protein_coding	GIPC PDZ domain containing family, member 1
chr8	84379366;84383855	84383649;84387588	+	84379366	84387588	cassetteExon	0.5	100	100	ENSMUST00000019577.10	ENSMUSG00000019433.10	Gipc1	chr8	protein_coding	GIPC PDZ domain containing family, member 1
chr8	84379366	84383649	+	84379366	84388584	A3SS	0.33	50	50	ENSMUST00000211985.2	ENSMUSG00000019433.10	Gipc1	chr8	protein_coding	GIPC PDZ domain containing family, member 1
chr8	84398070	84398536	-	84398070;84398422	84398346;84398536	ES	0.5	50	50	ENSMUST00000005616.16	ENSMUSG00000057672.17	Pkn1	chr8	protein_coding	protein kinase N1
chr8	84419565;84424701	84424637;84425596	-	84419565	84425596	cassetteExon	0.5	100	100	ENSMUST00000005616.16	ENSMUSG00000057672.17	Pkn1	chr8	protein_coding	protein kinase N1
chr8	84419565	84420589	-	84419565	84425596	A5SS	0.33	50	50	ENSMUST00000005616.16	ENSMUSG00000057672.17	Pkn1	chr8	protein_coding	protein kinase N1
chr8	84419565	84424637	-	84419565	84420589	5pMXE	0.33	50	50	ENSMUST00000144258.8	ENSMUSG00000057672.17	Pkn1	chr8	protein_coding	protein kinase N1
chr8	84398070	84398536	-	84398070	84398346	5pMXE	0.5	50	50	ENSMUST00000138898.2	ENSMUSG00000057672.17	Pkn1	chr8	protein_coding	protein kinase N1
chr8	84447769;84448153	84448095;84448363	+	84447769	84448363	cassetteExon	0.5	100	100	ENSMUST00000019576.15	ENSMUSG00000005481.19	Ddx39a	chr8	protein_coding	DEAD box helicase 39a
chr8	84442475	84446016	+	84441966	84446016	A5SS	0.5	50	50	ENSMUST00000019576.15	ENSMUSG00000005481.19	Ddx39a	chr8	protein_coding	DEAD box helicase 39a
chr8	84456154;84456886	84456740;84460043	-	84456154	84460043	cassetteExon	0.5	100	100	ENSMUST00000166939.8	ENSMUSG00000002885.15	Adgre5	chr8	protein_coding	adhesion G protein-coupled receptor E5
chr8	84458666	84460043	-	84456154	84460043	A3SS	0.33	50	50	ENSMUST00000166939.8	ENSMUSG00000002885.15	Adgre5	chr8	protein_coding	adhesion G protein-coupled receptor E5
chr8	84461039	84467736	-	84460981	84467736	A3SS	0.5	50	50	ENSMUST00000166939.8	ENSMUSG00000002885.15	Adgre5	chr8	protein_coding	adhesion G protein-coupled receptor E5
chr8	84460754	84460925	-	84460754	84460931	A5SS	0.5	50	50	ENSMUST00000166939.8	ENSMUSG00000002885.15	Adgre5	chr8	protein_coding	adhesion G protein-coupled receptor E5
chr8	84456886	84460043	-	84456886;84458666	84458532;84460043	ES	0.33	50	50	ENSMUST00000075843.13	ENSMUSG00000002885.15	Adgre5	chr8	protein_coding	adhesion G protein-coupled receptor E5
chr8	84664406	84664979	+	84664406;84664562	84664545;84664979	ES	0.5	50	50	ENSMUST00000141158.8	ENSMUSG00000013033.17	Adgrl1	chr8	protein_coding	adhesion G protein-coupled receptor L1
chr8	84649737;84650984	84650835;84656093	+	84649737	84656093	cassetteExon	0.5	100	100	ENSMUST00000141158.8	ENSMUSG00000013033.17	Adgrl1	chr8	protein_coding	adhesion G protein-coupled receptor L1
chr8	84649737;84652905	84652891;84656093	+	84649737	84656093	cassetteExon	0.5	100	100	ENSMUST00000141158.8	ENSMUSG00000013033.17	Adgrl1	chr8	protein_coding	adhesion G protein-coupled receptor L1
chr8	84649737	84652891	+	84649737;84650984	84650835;84652891	ES	0.5	50	50	ENSMUST00000124355.8	ENSMUSG00000013033.17	Adgrl1	chr8	protein_coding	adhesion G protein-coupled receptor L1
chr8	84650984	84656093	+	84650984;84652905	84652891;84656093	ES	0.33	50	50	ENSMUST00000124355.8	ENSMUSG00000013033.17	Adgrl1	chr8	protein_coding	adhesion G protein-coupled receptor L1
chr8	84649737;84650984	84650835;84656093	+	84649737;84652905	84652891;84656093	MXE	0.5	100	100	ENSMUST00000045393.15	ENSMUSG00000013033.17	Adgrl1	chr8	protein_coding	adhesion G protein-coupled receptor L1
chr8	84649737	84652891	+	84650984	84652891	5pMXE	0.5	50	50	ENSMUST00000131717.2	ENSMUSG00000013033.17	Adgrl1	chr8	protein_coding	adhesion G protein-coupled receptor L1
chr8	84661235	84662361	-	84661235;84661699	84661488;84662361	ES	0.5	50	50	ENSMUST00000098595.3	ENSMUSG00000074219.4	Gm10644	chr8	lncRNA	predicted gene 10644
chr8	84662457	84681732	-	84662457;84662804	84662697;84681732	ES	0.5	50	50	ENSMUST00000098595.3	ENSMUSG00000074219.4	Gm10644	chr8	lncRNA	predicted gene 10644
chr8	84660252	84660355	-	84660201	84660355	A3SS	0.5	50	50	ENSMUST00000238640.2	ENSMUSG00000074219.4	Gm10644	chr8	lncRNA	predicted gene 10644
chr8	84691775	84694448	+	84691775	84694463	A3SS	0.5	50	50	ENSMUST00000005607.9	ENSMUSG00000005470.9	Asf1b	chr8	protein_coding	anti-silencing function 1B histone chaperone
chr8	84703723	84707403	+	84699861	84707403	A5SS	0.5	50	50	ENSMUST00000005606.8	ENSMUSG00000005469.11	Prkaca	chr8	protein_coding	protein kinase, cAMP dependent, catalytic, alpha
chr8	84728534	84729490	+	84728534	84729487	A3SS	0.5	50	50	ENSMUST00000060357.15	ENSMUSG00000046408.16	1700067K01Rik	chr8	protein_coding	RIKEN cDNA 1700067K01 gene
chr8	84730752	84731080	+	84730688	84731080	A5SS	0.5	50	50	ENSMUST00000060357.15	ENSMUSG00000046408.16	1700067K01Rik	chr8	protein_coding	RIKEN cDNA 1700067K01 gene
chr8	84737121	84737770	-	84737121;84737401	84737340;84737770	ES	0.33	50	50	ENSMUST00000190457.2	ENSMUSG00000074217.9	Misp3	chr8	protein_coding	MISP family member 3
chr8	84737401;84737636	84737588;84737770	-	84737401	84737770	cassetteExon	0.5	100	100	ENSMUST00000190457.2	ENSMUSG00000074217.9	Misp3	chr8	protein_coding	MISP family member 3
chr8	84737121;84737636	84737340;84737770	-	84737121	84737770	cassetteExon	0.5	100	100	ENSMUST00000056686.12	ENSMUSG00000074217.9	Misp3	chr8	protein_coding	MISP family member 3
chr8	84738377	84738743	-	84738399	84738743	A3SS	0.5	50	50	ENSMUST00000185457.2	ENSMUSG00000074217.9	Misp3	chr8	protein_coding	MISP family member 3
chr8	84767484	84768716	-	84767718	84768716	A3SS&ES	0.5	50	50	ENSMUST00000005601.9	ENSMUSG00000005465.10	Il27ra	chr8	protein_coding	interleukin 27 receptor, alpha
chr8	84760922	84762470	-	84760922	84762714	A5SS	0.5	50	50	ENSMUST00000005601.9	ENSMUSG00000005465.10	Il27ra	chr8	protein_coding	interleukin 27 receptor, alpha
chr8	84762902	84763002	-	84762902	84762992	A5SS	0.5	50	50	ENSMUST00000005601.9	ENSMUSG00000005465.10	Il27ra	chr8	protein_coding	interleukin 27 receptor, alpha
chr8	84822302	84822426	+	84822302	84822390	A3SS	0.5	50	50	ENSMUST00000211046.2	ENSMUSG00000031706.8	Rfx1	chr8	protein_coding	regulatory factor X, 1 (influences HLA class II expression)
chr8	84829682;84830109	84830056;84831246	-	84829682	84831246	cassetteExon	0.5	100	100	ENSMUST00000041367.9	ENSMUSG00000037103.9	Dcaf15	chr8	protein_coding	DDB1 and CUL4 associated factor 15
chr8	84824137	84824366	-	84824137	84824252	A5SS	0.5	50	50	ENSMUST00000041367.9	ENSMUSG00000037103.9	Dcaf15	chr8	protein_coding	DDB1 and CUL4 associated factor 15
chr8	84870138;84870371	84870237;84870587	-	84870138	84870587	cassetteExon	0.5	100	100	ENSMUST00000117424.9	ENSMUSG00000036686.17	Cc2d1a	chr8	protein_coding	coiled-coil and C2 domain containing 1A
chr8	84865458	84865919	-	84865455	84865919	A3SS	0.5	50	50	ENSMUST00000117424.9	ENSMUSG00000036686.17	Cc2d1a	chr8	protein_coding	coiled-coil and C2 domain containing 1A
chr8	84873160	84874276	-	84873078	84874276	A3SS	0.5	50	50	ENSMUST00000117424.9	ENSMUSG00000036686.17	Cc2d1a	chr8	protein_coding	coiled-coil and C2 domain containing 1A
chr8	84887920	84893210	+	84887920	84888929	3pMXE	0.5	50	50	ENSMUST00000143833.8	ENSMUSG00000008129.15	Brme1	chr8	protein_coding	break repair meiotic recombinase recruitment factor 1
chr8	84875027	84875467	+	84874693	84875467	A5SS	0.5	50	50	ENSMUST00000143833.8	ENSMUSG00000008129.15	Brme1	chr8	protein_coding	break repair meiotic recombinase recruitment factor 1
chr8	84887920	84893210	+	84887920;84889033	84888929;84893210	ES	0.5	50	50	ENSMUST00000118856.8	ENSMUSG00000008129.15	Brme1	chr8	protein_coding	break repair meiotic recombinase recruitment factor 1
chr8	84900601	84902692	-	84900601	84911655	A5SS	0.33	50	50	ENSMUST00000211482.2	ENSMUSG00000056155.7	Nanos3	chr8	protein_coding	nanos C2HC-type zinc finger 3
chr8	84900601	84902704	-	84900601	84911655	A5SS	0.33	50	50	ENSMUST00000211482.2	ENSMUSG00000056155.7	Nanos3	chr8	protein_coding	nanos C2HC-type zinc finger 3
chr8	84900601	84902704	-	84900601	84902692	A5SS	0.33	50	50	ENSMUST00000070102.6	ENSMUSG00000056155.7	Nanos3	chr8	protein_coding	nanos C2HC-type zinc finger 3
chr8	84980981	84983519	-	84980981;84983048	84982873;84983519	ES	0.5	50	50	ENSMUST00000126435.8	ENSMUSG00000004996.10	Mri1	chr8	protein_coding	methylthioribose-1-phosphate isomerase 1
chr8	84977771	84980492	-	84978340	84980492	A3SS	0.5	50	50	ENSMUST00000126435.8	ENSMUSG00000004996.10	Mri1	chr8	protein_coding	methylthioribose-1-phosphate isomerase 1
chr8	84980716	84980814	-	84980716	84980805	A5SS	0.5	50	50	ENSMUST00000126435.8	ENSMUSG00000004996.10	Mri1	chr8	protein_coding	methylthioribose-1-phosphate isomerase 1
chr8	84980981	84982937	-	84980981	84982873	A5SS	0.33	50	50	ENSMUST00000126435.8	ENSMUSG00000004996.10	Mri1	chr8	protein_coding	methylthioribose-1-phosphate isomerase 1
chr8	84980981	84983519	-	84980981	84982873	5pMXE	0.33	50	50	ENSMUST00000125498.2	ENSMUSG00000004996.10	Mri1	chr8	protein_coding	methylthioribose-1-phosphate isomerase 1
chr8	84980981	84983519	-	84980981;84983048	84982937;84983519	ES	0.5	50	50	ENSMUST00000005122.4	ENSMUSG00000004996.10	Mri1	chr8	protein_coding	methylthioribose-1-phosphate isomerase 1
chr8	84980981	84983519	-	84983048	84983519	3pMXE	0.5	50	50	ENSMUST00000127747.2	ENSMUSG00000004996.10	Mri1	chr8	protein_coding	methylthioribose-1-phosphate isomerase 1
chr8	84985555	84986923	-	84985555;84985880	84985742;84986923	ES	0.5	50	50	ENSMUST00000098578.10	ENSMUSG00000004994.13	Ccdc130	chr8	protein_coding	coiled-coil domain containing 130
chr8	84990573	84993465	-	84990573;84990991	84990938;84993465	ES	0.5	50	50	ENSMUST00000098578.10	ENSMUSG00000004994.13	Ccdc130	chr8	protein_coding	coiled-coil domain containing 130
chr8	84988429	84989596	-	84988429	84989622	A5SS	0.5	50	50	ENSMUST00000098578.10	ENSMUSG00000004994.13	Ccdc130	chr8	protein_coding	coiled-coil domain containing 130
chr8	84985555	84986923	-	84985880	84986923	3pMXE	0.5	50	50	ENSMUST00000172320.2	ENSMUSG00000004994.13	Ccdc130	chr8	protein_coding	coiled-coil domain containing 130
chr8	84990573	84993465	-	84990991	84993465	3pMXE	0.5	50	50	ENSMUST00000166728.2	ENSMUSG00000004994.13	Ccdc130	chr8	protein_coding	coiled-coil domain containing 130
chr8	85328134	85328553	+	85328134;85328450	85328385;85328553	ES	0.5	50	50	ENSMUST00000238701.2	ENSMUSG00000034656.19	Cacna1a	chr8	protein_coding	calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
chr8	85339041;85342299	85342203;85344421	+	85339041;85341420	85341324;85344421	MXE	0.5	100	100	ENSMUST00000238701.2	ENSMUSG00000034656.19	Cacna1a	chr8	protein_coding	calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
chr8	85263087	85264068	+	85263087	85264065	A3SS	0.5	50	50	ENSMUST00000238701.2	ENSMUSG00000034656.19	Cacna1a	chr8	protein_coding	calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
chr8	85115151	85142273	+	85083754	85142273	A5SS	0.5	50	50	ENSMUST00000238701.2	ENSMUSG00000034656.19	Cacna1a	chr8	protein_coding	calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
chr8	85142537	85189315	+	85188224	85189315	A5SS&ES	0.5	50	50	ENSMUST00000238701.2	ENSMUSG00000034656.19	Cacna1a	chr8	protein_coding	calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
chr8	85273989	85275138	+	85271412	85275138	A5SS	0.5	50	50	ENSMUST00000238701.2	ENSMUSG00000034656.19	Cacna1a	chr8	protein_coding	calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
chr8	85327290	85328018	+	85320849	85328018	A5SS	0.5	50	50	ENSMUST00000238701.2	ENSMUSG00000034656.19	Cacna1a	chr8	protein_coding	calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
chr8	85365671	85365867	+	85365494	85365867	A5SS	0.5	50	50	ENSMUST00000238701.2	ENSMUSG00000034656.19	Cacna1a	chr8	protein_coding	calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
chr8	85338377	85344421	+	85338377	85338914	3pMXE	0.5	50	50	ENSMUST00000141981.8	ENSMUSG00000034656.19	Cacna1a	chr8	protein_coding	calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
chr8	85341420	85344421	+	85338377	85344421	A5SS	0.33	50	50	ENSMUST00000144879.8	ENSMUSG00000034656.19	Cacna1a	chr8	protein_coding	calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
chr8	85342299	85344421	+	85338377	85344421	A5SS	0.33	50	50	ENSMUST00000144879.8	ENSMUSG00000034656.19	Cacna1a	chr8	protein_coding	calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
chr8	85402887	85403051	-	85402887	85402970	A5SS	0.5	50	50	ENSMUST00000001975.6	ENSMUSG00000001910.6	Nacc1	chr8	protein_coding	nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
chr8	85403881	85413677	-	85403881	85414304	A5SS	0.25	50	50	ENSMUST00000001975.6	ENSMUSG00000001910.6	Nacc1	chr8	protein_coding	nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
chr8	85403881	85413998	-	85403881	85414304	A5SS	0.25	50	50	ENSMUST00000001975.6	ENSMUSG00000001910.6	Nacc1	chr8	protein_coding	nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
chr8	85403881	85414019	-	85403881	85414304	A5SS	0.25	50	50	ENSMUST00000001975.6	ENSMUSG00000001910.6	Nacc1	chr8	protein_coding	nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
chr8	85403881	85413998	-	85403881	85413677	5pMXE	0.25	50	50	ENSMUST00000238301.2	ENSMUSG00000001910.6	Nacc1	chr8	protein_coding	nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
chr8	85403881	85414019	-	85403881	85413677	5pMXE	0.25	50	50	ENSMUST00000238301.2	ENSMUSG00000001910.6	Nacc1	chr8	protein_coding	nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
chr8	85403881	85414019	-	85403881	85413998	A5SS	0.25	50	50	ENSMUST00000238449.2	ENSMUSG00000001910.6	Nacc1	chr8	protein_coding	nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
chr8	85413328	85413636	+	85413328	85416337	A3SS	0.33	50	50	ENSMUST00000175980.8	ENSMUSG00000001909.17	Trmt1	chr8	protein_coding	tRNA methyltransferase 1
chr8	85413328	85416261	+	85413328	85416337	A3SS	0.33	50	50	ENSMUST00000175980.8	ENSMUSG00000001909.17	Trmt1	chr8	protein_coding	tRNA methyltransferase 1
chr8	85416537	85417279	+	85416537	85417146	A3SS	0.5	50	50	ENSMUST00000175980.8	ENSMUSG00000001909.17	Trmt1	chr8	protein_coding	tRNA methyltransferase 1
chr8	85415978	85416337	+	85413328	85416337	A5SS	0.33	50	50	ENSMUST00000175980.8	ENSMUSG00000001909.17	Trmt1	chr8	protein_coding	tRNA methyltransferase 1
chr8	85416005	85416337	+	85413328	85416337	A5SS	0.33	50	50	ENSMUST00000175980.8	ENSMUSG00000001909.17	Trmt1	chr8	protein_coding	tRNA methyltransferase 1
chr8	85413328	85416261	+	85413328	85413636	3pMXE	0.33	50	50	ENSMUST00000176914.2	ENSMUSG00000001909.17	Trmt1	chr8	protein_coding	tRNA methyltransferase 1
chr8	85417201	85417402	+	85417201	85417440	A3SS	0.25	50	50	ENSMUST00000177531.8	ENSMUSG00000001909.17	Trmt1	chr8	protein_coding	tRNA methyltransferase 1
chr8	85417201	85417414	+	85417201	85417440	A3SS	0.25	50	50	ENSMUST00000177531.8	ENSMUSG00000001909.17	Trmt1	chr8	protein_coding	tRNA methyltransferase 1
chr8	85417201	85417431	+	85417201	85417440	A3SS	0.25	50	50	ENSMUST00000177531.8	ENSMUSG00000001909.17	Trmt1	chr8	protein_coding	tRNA methyltransferase 1
chr8	85415978	85416261	+	85413328	85416261	A5SS	0.33	50	50	ENSMUST00000177531.8	ENSMUSG00000001909.17	Trmt1	chr8	protein_coding	tRNA methyltransferase 1
chr8	85416005	85416261	+	85413328	85416261	A5SS	0.33	50	50	ENSMUST00000177531.8	ENSMUSG00000001909.17	Trmt1	chr8	protein_coding	tRNA methyltransferase 1
chr8	85423604	85423898	+	85423604;85423830	85423744;85423898	ES	0.5	50	50	ENSMUST00000001974.11	ENSMUSG00000001909.17	Trmt1	chr8	protein_coding	tRNA methyltransferase 1
chr8	85416005	85416337	+	85416005	85416261	A3SS	0.5	50	50	ENSMUST00000001974.11	ENSMUSG00000001909.17	Trmt1	chr8	protein_coding	tRNA methyltransferase 1
chr8	85418068	85418501	+	85418068	85421851	A3SS	0.5	50	50	ENSMUST00000001974.11	ENSMUSG00000001909.17	Trmt1	chr8	protein_coding	tRNA methyltransferase 1
chr8	85415978	85416261	+	85416005	85416261	A5SS	0.33	50	50	ENSMUST00000001974.11	ENSMUSG00000001909.17	Trmt1	chr8	protein_coding	tRNA methyltransferase 1
chr8	85421953	85422057	+	85421966	85422057	A5SS	0.5	50	50	ENSMUST00000001974.11	ENSMUSG00000001909.17	Trmt1	chr8	protein_coding	tRNA methyltransferase 1
chr8	85423977	85424054	+	85423967	85424054	A5SS	0.5	50	50	ENSMUST00000001974.11	ENSMUSG00000001909.17	Trmt1	chr8	protein_coding	tRNA methyltransferase 1
chr8	85424400	85424814	+	85424360	85424814	A5SS	0.5	50	50	ENSMUST00000001974.11	ENSMUSG00000001909.17	Trmt1	chr8	protein_coding	tRNA methyltransferase 1
chr8	85415978	85416337	+	85415978	85416261	A3SS	0.5	50	50	ENSMUST00000109767.9	ENSMUSG00000001909.17	Trmt1	chr8	protein_coding	tRNA methyltransferase 1
chr8	85416005	85416337	+	85415978	85416337	A5SS	0.33	50	50	ENSMUST00000176053.8	ENSMUSG00000001909.17	Trmt1	chr8	protein_coding	tRNA methyltransferase 1
chr8	85417201	85417414	+	85417201	85417402	A3SS	0.25	50	50	ENSMUST00000131700.8	ENSMUSG00000001909.17	Trmt1	chr8	protein_coding	tRNA methyltransferase 1
chr8	85417201	85417431	+	85417201	85417402	A3SS	0.25	50	50	ENSMUST00000131700.8	ENSMUSG00000001909.17	Trmt1	chr8	protein_coding	tRNA methyltransferase 1
chr8	85417201	85417414	+	85417201	85417431	A3SS	0.25	50	50	ENSMUST00000152301.9	ENSMUSG00000001909.17	Trmt1	chr8	protein_coding	tRNA methyltransferase 1
chr8	85423604	85423898	+	85423604	85423744	3pMXE	0.5	50	50	ENSMUST00000128022.9	ENSMUSG00000001909.17	Trmt1	chr8	protein_coding	tRNA methyltransferase 1
chr8	85423604	85423898	+	85423830	85423898	5pMXE	0.5	50	50	ENSMUST00000175884.3	ENSMUSG00000001909.17	Trmt1	chr8	protein_coding	tRNA methyltransferase 1
chr8	85431517	85434289	-	85426848	85434289	A3SS	0.5	50	50	ENSMUST00000148644.2	ENSMUSG00000001911.17	Nfix	chr8	protein_coding	nuclear factor I/X
chr8	85440486	85448272	-	85440486;85442917	85442770;85448272	ES	0.5	50	50	ENSMUST00000109764.8	ENSMUSG00000001911.17	Nfix	chr8	protein_coding	nuclear factor I/X
chr8	85448447	85453098	-	85448447;85450479	85450357;85453098	ES	0.5	50	50	ENSMUST00000109764.8	ENSMUSG00000001911.17	Nfix	chr8	protein_coding	nuclear factor I/X
chr8	85498944	85526627	-	85498944	85499983	5pMXE	0.5	50	50	ENSMUST00000109764.8	ENSMUSG00000001911.17	Nfix	chr8	protein_coding	nuclear factor I/X
chr8	85453231	85453753	-	85453234	85453753	A3SS	0.5	50	50	ENSMUST00000109764.8	ENSMUSG00000001911.17	Nfix	chr8	protein_coding	nuclear factor I/X
chr8	85429352	85429716	+	85429624	85429716	A5SS	0.5	50	50	ENSMUST00000238562.2	ENSMUSG00000034041.6	Lyl1	chr8	protein_coding	lymphoblastomic leukemia 1
chr8	85543162	85558799	-	85543162	85548998	5pMXE	0.5	50	50	ENSMUST00000065539.6	ENSMUSG00000053226.8	Dand5	chr8	protein_coding	DAN domain family member 5, BMP antagonist
chr8	85562303	85562384	-	85560953	85562384	A3SS	0.5	50	50	ENSMUST00000144675.8	ENSMUSG00000003813.16	Rad23a	chr8	protein_coding	RAD23 homolog A, nucleotide excision repair protein
chr8	85564219	85564318	-	85564222	85564318	A3SS	0.5	50	50	ENSMUST00000144675.8	ENSMUSG00000003813.16	Rad23a	chr8	protein_coding	RAD23 homolog A, nucleotide excision repair protein
chr8	85564940	85565098	-	85564957	85565098	A3SS	0.5	50	50	ENSMUST00000003911.13	ENSMUSG00000003813.16	Rad23a	chr8	protein_coding	RAD23 homolog A, nucleotide excision repair protein
chr8	85562303	85562449	-	85562303	85562384	A5SS	0.5	50	50	ENSMUST00000003911.13	ENSMUSG00000003813.16	Rad23a	chr8	protein_coding	RAD23 homolog A, nucleotide excision repair protein
chr8	85574296	85574699	+	85573949	85574699	A5SS	0.5	50	50	ENSMUST00000147538.2	ENSMUSG00000087685.2	1700122E12Rik	chr8	lncRNA	RIKEN cDNA 1700122E12 gene
chr8	85594277	85594382	+	85594277	85594379	A3SS	0.5	50	50	ENSMUST00000003906.13	ENSMUSG00000003808.19	Farsa	chr8	protein_coding	phenylalanyl-tRNA synthetase, alpha subunit
chr8	85587586	85587756	+	85587672	85587756	A5SS	0.5	50	50	ENSMUST00000003906.13	ENSMUSG00000003808.19	Farsa	chr8	protein_coding	phenylalanyl-tRNA synthetase, alpha subunit
chr8	85599461	85612564	+	85599461;85610213	85610060;85612564	ES	0.5	50	50	ENSMUST00000170296.2	ENSMUSG00000003824.13	Syce2	chr8	protein_coding	synaptonemal complex central element protein 2
chr8	85598882	85599349	+	85598882	85599331	A3SS	0.5	50	50	ENSMUST00000170296.2	ENSMUSG00000003824.13	Syce2	chr8	protein_coding	synaptonemal complex central element protein 2
chr8	85635791	85636155	+	85635791;85635964	85635886;85636155	ES	0.5	50	50	ENSMUST00000003910.13	ENSMUSG00000003812.14	Dnase2a	chr8	protein_coding	deoxyribonuclease II alpha
chr8	85635964	85636401	+	85635964;85636319	85636155;85636401	ES	0.5	50	50	ENSMUST00000003910.13	ENSMUSG00000003812.14	Dnase2a	chr8	protein_coding	deoxyribonuclease II alpha
chr8	85635503	85635614	+	85635499	85635614	A5SS	0.5	50	50	ENSMUST00000003910.13	ENSMUSG00000003812.14	Dnase2a	chr8	protein_coding	deoxyribonuclease II alpha
chr8	85635791	85636155	+	85635791	85635886	3pMXE	0.5	50	50	ENSMUST00000153215.8	ENSMUSG00000003812.14	Dnase2a	chr8	protein_coding	deoxyribonuclease II alpha
chr8	85635791;85635964	85635886;85636401	+	85635791;85636319	85636155;85636401	MXE	0.5	100	100	ENSMUST00000145292.8	ENSMUSG00000003812.14	Dnase2a	chr8	protein_coding	deoxyribonuclease II alpha
chr8	85640157	85647023	+	85640157	85640691	3pMXE	0.5	50	50	ENSMUST00000128400.2	ENSMUSG00000003812.14	Dnase2a	chr8	protein_coding	deoxyribonuclease II alpha
chr8	85648107	85650358	-	85648107	85650360	A5SS	0.5	50	50	ENSMUST00000109741.9	ENSMUSG00000053693.17	Mast1	chr8	protein_coding	microtubule associated serine/threonine kinase 1
chr8	85684482	85684595	-	85684493	85684595	A3SS	0.5	50	50	ENSMUST00000109738.10	ENSMUSG00000052926.17	Rnaseh2a	chr8	protein_coding	ribonuclease H2, large subunit
chr8	85692916	85693419	-	85692916	85694292	A5SS	0.5	50	50	ENSMUST00000109736.9	ENSMUSG00000052926.17	Rnaseh2a	chr8	protein_coding	ribonuclease H2, large subunit
chr8	85694497	85695727	-	85694497	85695915	A5SS	0.33	50	50	ENSMUST00000109736.9	ENSMUSG00000052926.17	Rnaseh2a	chr8	protein_coding	ribonuclease H2, large subunit
chr8	85694497	85696351	-	85694497	85695915	A5SS	0.33	50	50	ENSMUST00000109736.9	ENSMUSG00000052926.17	Rnaseh2a	chr8	protein_coding	ribonuclease H2, large subunit
chr8	85694497	85695727	-	85694497	85696351	A5SS	0.33	50	50	ENSMUST00000140561.8	ENSMUSG00000052926.17	Rnaseh2a	chr8	protein_coding	ribonuclease H2, large subunit
chr8	85696391	85696869	+	85696391	85696781	A3SS	0.5	50	50	ENSMUST00000109734.8	ENSMUSG00000005161.16	Prdx2	chr8	protein_coding	peroxiredoxin 2
chr8	85696637	85696869	+	85696391	85696869	A5SS	0.5	50	50	ENSMUST00000005292.15	ENSMUSG00000005161.16	Prdx2	chr8	protein_coding	peroxiredoxin 2
chr8	85725567	85727784	+	85725153	85727784	A5SS	0.5	50	50	ENSMUST00000209764.2	ENSMUSG00000052566.9	Hook2	chr8	protein_coding	hook microtubule tethering protein 2
chr8	85740215	85740888	-	85740215	85741006	A5SS	0.5	50	50	ENSMUST00000059072.6	ENSMUSG00000052819.7	Best2	chr8	protein_coding	bestrophin 2
chr8	85746679	85750807	-	85746537	85750807	A3SS	0.5	50	50	ENSMUST00000064314.10	ENSMUSG00000052456.10	Get3	chr8	protein_coding	guided entry of tail-anchored proteins factor 3, ATPase
chr8	85750954	85751307	-	85750954	85751734	A5SS	0.5	50	50	ENSMUST00000064314.10	ENSMUSG00000052456.10	Get3	chr8	protein_coding	guided entry of tail-anchored proteins factor 3, ATPase
chr8	85781050	85781351	+	85781050	85781321	A3SS	0.5	50	50	ENSMUST00000093360.12	ENSMUSG00000031691.15	Tnpo2	chr8	protein_coding	transportin 2 (importin 3, karyopherin beta 2b)
chr8	85767610	85771041	+	85767392	85771041	A5SS	0.5	50	50	ENSMUST00000093360.12	ENSMUSG00000031691.15	Tnpo2	chr8	protein_coding	transportin 2 (importin 3, karyopherin beta 2b)
chr8	85764269	85765007	+	85763920	85765007	A5SS	0.5	50	50	ENSMUST00000211601.2	ENSMUSG00000031691.15	Tnpo2	chr8	protein_coding	transportin 2 (importin 3, karyopherin beta 2b)
chr8	85781861	85786873	-	85781861	85787036	A5SS	0.5	50	50	ENSMUST00000125244.8	ENSMUSG00000087026.8	A230103J11Rik	chr8	lncRNA	RIKEN cDNA A230103J11 gene
chr8	85787979	85788575	+	85787165	85788575	A5SS	0.5	50	50	ENSMUST00000095220.4	ENSMUSG00000008167.15	Fbxw9	chr8	protein_coding	F-box and WD-40 domain protein 9
chr8	85792247	85792450	+	85791301	85792450	A5SS	0.5	50	50	ENSMUST00000095220.4	ENSMUSG00000008167.15	Fbxw9	chr8	protein_coding	F-box and WD-40 domain protein 9
chr8	85799245	85800132	+	85799245;85800045	85799924;85800132	ES	0.5	50	50	ENSMUST00000078665.13	ENSMUSG00000060038.15	Dhps	chr8	protein_coding	deoxyhypusine synthase
chr8	85799245	85800132	+	85800045	85800132	5pMXE	0.5	50	50	ENSMUST00000154575.8	ENSMUSG00000060038.15	Dhps	chr8	protein_coding	deoxyhypusine synthase
chr8	85801972	85802653	-	85801972;85802566	85802452;85802653	ES	0.5	50	50	ENSMUST00000131909.8	ENSMUSG00000005150.17	Wdr83	chr8	protein_coding	WD repeat domain containing 83
chr8	85802566	85806210	-	85802566;85802913	85802653;85806210	ES	0.5	50	50	ENSMUST00000136696.8	ENSMUSG00000005150.17	Wdr83	chr8	protein_coding	WD repeat domain containing 83
chr8	85806466	85806683	-	85806466	85806749	A5SS	0.5	50	50	ENSMUST00000093357.12	ENSMUSG00000005150.17	Wdr83	chr8	protein_coding	WD repeat domain containing 83
chr8	85801972;85802913	85802653;85806210	-	85801972;85802566	85802452;85806210	MXE	0.5	100	100	ENSMUST00000145880.8	ENSMUSG00000005150.17	Wdr83	chr8	protein_coding	WD repeat domain containing 83
chr8	85802566	85806210	-	85802566	85802653	5pMXE	0.5	50	50	ENSMUST00000146900.2	ENSMUSG00000005150.17	Wdr83	chr8	protein_coding	WD repeat domain containing 83
chr8	85801972	85802653	-	85802566	85802653	A3SS	0.5	50	50	ENSMUST00000152186.2	ENSMUSG00000005150.17	Wdr83	chr8	protein_coding	WD repeat domain containing 83
chr8	85808503	85808612	+	85808503	85808575	A3SS	0.5	50	50	ENSMUST00000079764.14	ENSMUSG00000059355.14	Wdr83os	chr8	protein_coding	WD repeat domain 83 opposite strand
chr8	85810117;85811132	85811030;85811270	+	85810117	85811270	cassetteExon	0.5	100	100	ENSMUST00000209361.2	ENSMUSG00000005142.11	Man2b1	chr8	protein_coding	mannosidase 2, alpha B1
chr8	85810117	85811030	+	85810040	85811030	A5SS	0.5	50	50	ENSMUST00000209264.2	ENSMUSG00000005142.11	Man2b1	chr8	protein_coding	mannosidase 2, alpha B1
chr8	85810117	85811270	+	85811132	85811270	A5SS&ES	0.5	50	50	ENSMUST00000209264.2	ENSMUSG00000005142.11	Man2b1	chr8	protein_coding	mannosidase 2, alpha B1
chr8	86015909	86016335	-	86014448	86016335	A3SS	0.5	50	50	ENSMUST00000034131.10	ENSMUSG00000031696.10	Vps35	chr8	protein_coding	VPS35 retromer complex component
chr8	86018313	86021488	-	86016431	86021488	A3SS	0.5	50	50	ENSMUST00000034131.10	ENSMUSG00000031696.10	Vps35	chr8	protein_coding	VPS35 retromer complex component
chr8	86026621	86029425	+	86026621;86027867	86027738;86029425	ES	0.33	50	50	ENSMUST00000211597.2	ENSMUSG00000031697.13	Orc6	chr8	protein_coding	origin recognition complex, subunit 6
chr8	86030080	86031838	+	86030080	86030332	3pMXE	0.33	50	50	ENSMUST00000211597.2	ENSMUSG00000031697.13	Orc6	chr8	protein_coding	origin recognition complex, subunit 6
chr8	86030080	86032846	+	86030080	86030332	3pMXE	0.33	50	50	ENSMUST00000211597.2	ENSMUSG00000031697.13	Orc6	chr8	protein_coding	origin recognition complex, subunit 6
chr8	86027867;86028353	86028252;86029425	+	86027867	86029425	cassetteExon	0.5	100	100	ENSMUST00000211597.2	ENSMUSG00000031697.13	Orc6	chr8	protein_coding	origin recognition complex, subunit 6
chr8	86030080	86032846	+	86030080	86031838	3pMXE	0.33	50	50	ENSMUST00000211396.2	ENSMUSG00000031697.13	Orc6	chr8	protein_coding	origin recognition complex, subunit 6
chr8	86030080	86032846	+	86030080;86031950	86031838;86032846	ES	0.5	50	50	ENSMUST00000170141.3	ENSMUSG00000031697.13	Orc6	chr8	protein_coding	origin recognition complex, subunit 6
chr8	86028353	86029425	+	86026621	86029425	A5SS	0.33	50	50	ENSMUST00000170141.3	ENSMUSG00000031697.13	Orc6	chr8	protein_coding	origin recognition complex, subunit 6
chr8	86026621	86029425	+	86026621	86027738	3pMXE	0.5	50	50	ENSMUST00000209733.2	ENSMUSG00000031697.13	Orc6	chr8	protein_coding	origin recognition complex, subunit 6
chr8	86087202	86107488	-	86087202	86091318	5pMXE	0.25	50	50	ENSMUST00000034133.14	ENSMUSG00000031698.15	Mylk3	chr8	protein_coding	myosin light chain kinase 3
chr8	86087202	86112737	-	86087202	86091318	5pMXE	0.25	50	50	ENSMUST00000034133.14	ENSMUSG00000031698.15	Mylk3	chr8	protein_coding	myosin light chain kinase 3
chr8	86087202	86091507	-	86087202	86091318	A5SS	0.25	50	50	ENSMUST00000034133.14	ENSMUSG00000031698.15	Mylk3	chr8	protein_coding	myosin light chain kinase 3
chr8	86087202	86112737	-	86087202	86107488	5pMXE	0.25	50	50	ENSMUST00000122452.8	ENSMUSG00000031698.15	Mylk3	chr8	protein_coding	myosin light chain kinase 3
chr8	86087202	86091507	-	86087202	86107488	A5SS	0.25	50	50	ENSMUST00000122452.8	ENSMUSG00000031698.15	Mylk3	chr8	protein_coding	myosin light chain kinase 3
chr8	86087202	86112737	-	86087202	86091507	5pMXE	0.25	50	50	ENSMUST00000121972.8	ENSMUSG00000031698.15	Mylk3	chr8	protein_coding	myosin light chain kinase 3
chr8	86138924	86159288	-	86138924;86153585	86153489;86159288	ES	0.33	50	50	ENSMUST00000047749.7	ENSMUSG00000036934.10	4921524J17Rik	chr8	protein_coding	RIKEN cDNA 4921524J17 gene
chr8	86153585;86154391	86154300;86159288	-	86153585	86159288	cassetteExon	0.5	100	100	ENSMUST00000047749.7	ENSMUSG00000036934.10	4921524J17Rik	chr8	protein_coding	RIKEN cDNA 4921524J17 gene
chr8	86154391	86159288	-	86138924	86159288	A3SS	0.33	50	50	ENSMUST00000209355.2	ENSMUSG00000036934.10	4921524J17Rik	chr8	protein_coding	RIKEN cDNA 4921524J17 gene
chr8	86232496	86235808	+	86232316	86235808	A5SS	0.5	50	50	ENSMUST00000034136.12	ENSMUSG00000031700.12	Gpt2	chr8	protein_coding	glutamic pyruvate transaminase (alanine aminotransferase) 2
chr8	86400759	86427270	-	86400759	86417464	5pMXE	0.5	50	50	ENSMUST00000109686.4	ENSMUSG00000036902.12	Neto2	chr8	protein_coding	neuropilin (NRP) and tolloid (TLL)-like 2
chr8	86374573;86381376	86381199;86389808	-	86374573	86389808	cassetteExon	0.5	100	100	ENSMUST00000109686.4	ENSMUSG00000036902.12	Neto2	chr8	protein_coding	neuropilin (NRP) and tolloid (TLL)-like 2
chr8	86389935	86390016	-	86389935	86390037	A5SS	0.5	50	50	ENSMUST00000109686.4	ENSMUSG00000036902.12	Neto2	chr8	protein_coding	neuropilin (NRP) and tolloid (TLL)-like 2
chr8	86567732	86602263	+	86567732;86569741	86569650;86602263	ES	0.33	50	50	ENSMUST00000159716.8	ENSMUSG00000036879.16	Phkb	chr8	protein_coding	phosphorylase kinase beta
chr8	86569741;86575360	86575303;86602263	+	86569741	86602263	cassetteExon	0.5	100	100	ENSMUST00000159716.8	ENSMUSG00000036879.16	Phkb	chr8	protein_coding	phosphorylase kinase beta
chr8	86567732	86569633	+	86567732	86569650	A3SS	0.33	50	50	ENSMUST00000159716.8	ENSMUSG00000036879.16	Phkb	chr8	protein_coding	phosphorylase kinase beta
chr8	86567686	86569650	+	86567732	86569650	A5SS	0.5	50	50	ENSMUST00000159716.8	ENSMUSG00000036879.16	Phkb	chr8	protein_coding	phosphorylase kinase beta
chr8	86623166	86628506	+	86623166;86623386	86623298;86628506	ES	0.5	50	50	ENSMUST00000160611.8	ENSMUSG00000036879.16	Phkb	chr8	protein_coding	phosphorylase kinase beta
chr8	86662100	86667470	+	86662100	86662651	3pMXE	0.5	50	50	ENSMUST00000160611.8	ENSMUSG00000036879.16	Phkb	chr8	protein_coding	phosphorylase kinase beta
chr8	86567732	86602263	+	86569741	86602263	A5SS&ES	0.33	50	50	ENSMUST00000160611.8	ENSMUSG00000036879.16	Phkb	chr8	protein_coding	phosphorylase kinase beta
chr8	86567732	86602263	+	86567732;86569741	86569633;86602263	ES	0.33	50	50	ENSMUST00000053771.14	ENSMUSG00000036879.16	Phkb	chr8	protein_coding	phosphorylase kinase beta
chr8	86756313	86756662	+	86756313	86770339	A3SS	0.5	50	50	ENSMUST00000053771.14	ENSMUSG00000036879.16	Phkb	chr8	protein_coding	phosphorylase kinase beta
chr8	86762373	86770339	+	86756313	86770339	A5SS	0.5	50	50	ENSMUST00000053771.14	ENSMUSG00000036879.16	Phkb	chr8	protein_coding	phosphorylase kinase beta
chr8	86575360	86602263	+	86567732	86602263	A5SS	0.33	50	50	ENSMUST00000161850.8	ENSMUSG00000036879.16	Phkb	chr8	protein_coding	phosphorylase kinase beta
chr8	87258242;87259283	87259151;87261152	-	87258242	87261152	cassetteExon	0.5	100	100	ENSMUST00000129898.8	ENSMUSG00000036872.17	Abcc12	chr8	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 12
chr8	87261637;87264853	87264754;87264952	-	87261637	87264952	cassetteExon	0.5	100	100	ENSMUST00000129898.8	ENSMUSG00000036872.17	Abcc12	chr8	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 12
chr8	87234605	87235710	-	87234605	87235720	A5SS	0.5	50	50	ENSMUST00000129898.8	ENSMUSG00000036872.17	Abcc12	chr8	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 12
chr8	87378267	87378804	+	87368428	87378804	A5SS	0.5	50	50	ENSMUST00000034141.18	ENSMUSG00000047866.21	Lonp2	chr8	protein_coding	lon peptidase 2, peroxisomal
chr8	88251055	88251618	+	88251055	88252043	A3SS	0.33	50	50	ENSMUST00000210935.2	ENSMUSG00000097248.10	Gm2694	chr8	lncRNA	predicted gene 2694
chr8	88251055	88251860	+	88251055	88252043	A3SS	0.33	50	50	ENSMUST00000210935.2	ENSMUSG00000097248.10	Gm2694	chr8	lncRNA	predicted gene 2694
chr8	88199588	88248364	+	88240524	88248364	A5SS&ES	0.25	50	50	ENSMUST00000210935.2	ENSMUSG00000097248.10	Gm2694	chr8	lncRNA	predicted gene 2694
chr8	88199858	88240437	+	88222489	88240437	A5SS&ES	0.33	50	50	ENSMUST00000210935.2	ENSMUSG00000097248.10	Gm2694	chr8	lncRNA	predicted gene 2694
chr8	88199858	88248364	+	88240524	88248364	A5SS&ES	0.25	50	50	ENSMUST00000210935.2	ENSMUSG00000097248.10	Gm2694	chr8	lncRNA	predicted gene 2694
chr8	88200076	88240437	+	88222489	88240437	A5SS&ES	0.33	50	50	ENSMUST00000210935.2	ENSMUSG00000097248.10	Gm2694	chr8	lncRNA	predicted gene 2694
chr8	88229646	88248364	+	88240524	88248364	A5SS&ES	0.25	50	50	ENSMUST00000210935.2	ENSMUSG00000097248.10	Gm2694	chr8	lncRNA	predicted gene 2694
chr8	88199858	88248364	+	88199588	88248364	A5SS	0.25	50	50	ENSMUST00000180700.9	ENSMUSG00000097248.10	Gm2694	chr8	lncRNA	predicted gene 2694
chr8	88229646	88248364	+	88199588	88248364	A5SS	0.25	50	50	ENSMUST00000180700.9	ENSMUSG00000097248.10	Gm2694	chr8	lncRNA	predicted gene 2694
chr8	88251055	88251618	+	88251055	88251860	A3SS	0.33	50	50	ENSMUST00000181159.8	ENSMUSG00000097248.10	Gm2694	chr8	lncRNA	predicted gene 2694
chr8	88199858	88248364	+	88199858;88240524	88240437;88248364	ES	0.33	50	50	ENSMUST00000182650.8	ENSMUSG00000097248.10	Gm2694	chr8	lncRNA	predicted gene 2694
chr8	88200076	88240437	+	88199858	88240437	A5SS	0.33	50	50	ENSMUST00000182650.8	ENSMUSG00000097248.10	Gm2694	chr8	lncRNA	predicted gene 2694
chr8	88229646	88248364	+	88199858	88248364	A5SS	0.25	50	50	ENSMUST00000211631.2	ENSMUSG00000097248.10	Gm2694	chr8	lncRNA	predicted gene 2694
chr8	88200076	88240437	+	88200076	88229590	3pMXE	0.5	50	50	ENSMUST00000181898.2	ENSMUSG00000097248.10	Gm2694	chr8	lncRNA	predicted gene 2694
chr8	88200076;88229646	88229590;88248364	+	88200076;88240524	88240437;88248364	MXE	0.5	100	100	ENSMUST00000211487.2	ENSMUSG00000097248.10	Gm2694	chr8	lncRNA	predicted gene 2694
chr8	88197079	88197460	-	88197079	88198320	A5SS	0.5	50	50	ENSMUST00000034076.16	ENSMUSG00000031654.17	Cbln1	chr8	protein_coding	cerebellin 1 precursor protein
chr8	88510041	88585912	-	88510041	88530980	5pMXE	0.33	50	50	ENSMUST00000165770.9	ENSMUSG00000045333.16	Zfp423	chr8	protein_coding	zinc finger protein 423
chr8	88510041	88530348	-	88510041	88530980	A5SS	0.33	50	50	ENSMUST00000165770.9	ENSMUSG00000045333.16	Zfp423	chr8	protein_coding	zinc finger protein 423
chr8	88510041	88530348	-	88510041	88585912	A5SS	0.33	50	50	ENSMUST00000109655.9	ENSMUSG00000045333.16	Zfp423	chr8	protein_coding	zinc finger protein 423
chr8	88586112	88622299	-	88586112	88631117	A5SS	0.5	50	50	ENSMUST00000109655.9	ENSMUSG00000045333.16	Zfp423	chr8	protein_coding	zinc finger protein 423
chr8	88631176	88670344	-	88631176	88685824	A5SS	0.25	50	50	ENSMUST00000109655.9	ENSMUSG00000045333.16	Zfp423	chr8	protein_coding	zinc finger protein 423
chr8	88631176	88675316	-	88631176	88685824	A5SS	0.25	50	50	ENSMUST00000109655.9	ENSMUSG00000045333.16	Zfp423	chr8	protein_coding	zinc finger protein 423
chr8	88631176	88680428	-	88631176	88685824	A5SS	0.25	50	50	ENSMUST00000109655.9	ENSMUSG00000045333.16	Zfp423	chr8	protein_coding	zinc finger protein 423
chr8	88631176	88670344	-	88631176	88680428	A5SS	0.25	50	50	ENSMUST00000174764.2	ENSMUSG00000045333.16	Zfp423	chr8	protein_coding	zinc finger protein 423
chr8	88631176	88675316	-	88631176	88680428	A5SS	0.25	50	50	ENSMUST00000174764.2	ENSMUSG00000045333.16	Zfp423	chr8	protein_coding	zinc finger protein 423
chr8	88631176	88675316	-	88631176	88670344	5pMXE	0.25	50	50	ENSMUST00000173725.8	ENSMUSG00000045333.16	Zfp423	chr8	protein_coding	zinc finger protein 423
chr8	88846479	88856323	+	88846479;88851783	88851710;88856323	ES	0.5	50	50	ENSMUST00000095214.10	ENSMUSG00000036810.17	Cnep1r1	chr8	protein_coding	CTD nuclear envelope phosphatase 1 regulatory subunit 1
chr8	88856432	88856969	+	88856432	88856975	A3SS	0.5	50	50	ENSMUST00000095214.10	ENSMUSG00000036810.17	Cnep1r1	chr8	protein_coding	CTD nuclear envelope phosphatase 1 regulatory subunit 1
chr8	88857029	88857345	+	88857029	88860416	A3SS	0.33	50	50	ENSMUST00000095214.10	ENSMUSG00000036810.17	Cnep1r1	chr8	protein_coding	CTD nuclear envelope phosphatase 1 regulatory subunit 1
chr8	88857029	88857364	+	88857029	88860416	A3SS	0.33	50	50	ENSMUST00000095214.10	ENSMUSG00000036810.17	Cnep1r1	chr8	protein_coding	CTD nuclear envelope phosphatase 1 regulatory subunit 1
chr8	88857029	88857345	+	88857029	88857364	A3SS	0.33	50	50	ENSMUST00000131891.8	ENSMUSG00000036810.17	Cnep1r1	chr8	protein_coding	CTD nuclear envelope phosphatase 1 regulatory subunit 1
chr8	88864651	88864903	+	88864785	88864903	A5SS	0.5	50	50	ENSMUST00000034079.14	ENSMUSG00000031657.17	Heatr3	chr8	protein_coding	HEAT repeat containing 3
chr8	88974244;88975861	88975733;88977268	+	88974244	88977268	cassetteExon	0.5	100	100	ENSMUST00000066748.10	ENSMUSG00000036779.13	Tent4b	chr8	protein_coding	terminal nucleotidyltransferase 4B
chr8	88925941	88926585	+	88925941	88926559	A3SS	0.5	50	50	ENSMUST00000066748.10	ENSMUSG00000036779.13	Tent4b	chr8	protein_coding	terminal nucleotidyltransferase 4B
chr8	88978913	88979155	+	88978913	88979014	A3SS	0.5	50	50	ENSMUST00000066748.10	ENSMUSG00000036779.13	Tent4b	chr8	protein_coding	terminal nucleotidyltransferase 4B
chr8	88974244	88977268	+	88974244	88975733	3pMXE	0.5	50	50	ENSMUST00000125043.2	ENSMUSG00000036779.13	Tent4b	chr8	protein_coding	terminal nucleotidyltransferase 4B
chr8	89049661	89051062	+	89049661;89050435	89050260;89051062	ES	0.5	50	50	ENSMUST00000169037.9	ENSMUSG00000031659.14	Adcy7	chr8	protein_coding	adenylate cyclase 7
chr8	89052141	89053019	+	89052141;89052828	89052724;89053019	ES	0.5	50	50	ENSMUST00000169037.9	ENSMUSG00000031659.14	Adcy7	chr8	protein_coding	adenylate cyclase 7
chr8	89009646	89021655	+	88999241	89021655	A5SS	0.25	50	50	ENSMUST00000169037.9	ENSMUSG00000031659.14	Adcy7	chr8	protein_coding	adenylate cyclase 7
chr8	89015816	89021655	+	88999241	89021655	A5SS	0.25	50	50	ENSMUST00000169037.9	ENSMUSG00000031659.14	Adcy7	chr8	protein_coding	adenylate cyclase 7
chr8	89020890	89021655	+	88999241	89021655	A5SS	0.25	50	50	ENSMUST00000169037.9	ENSMUSG00000031659.14	Adcy7	chr8	protein_coding	adenylate cyclase 7
chr8	89027138	89032978	+	89022307	89032978	A5SS	0.5	50	50	ENSMUST00000169037.9	ENSMUSG00000031659.14	Adcy7	chr8	protein_coding	adenylate cyclase 7
chr8	89015816	89021655	+	89009646	89021655	A5SS	0.25	50	50	ENSMUST00000168545.8	ENSMUSG00000031659.14	Adcy7	chr8	protein_coding	adenylate cyclase 7
chr8	89020890	89021655	+	89009646	89021655	A5SS	0.25	50	50	ENSMUST00000168545.8	ENSMUSG00000031659.14	Adcy7	chr8	protein_coding	adenylate cyclase 7
chr8	89020890	89021655	+	89015816	89021655	A5SS	0.25	50	50	ENSMUST00000171456.9	ENSMUSG00000031659.14	Adcy7	chr8	protein_coding	adenylate cyclase 7
chr8	89060847	89063709	-	89060844	89063709	A3SS	0.5	50	50	ENSMUST00000034085.8	ENSMUSG00000031660.14	Brd7	chr8	protein_coding	bromodomain containing 7
chr8	89254405	89300826	+	89249048	89300826	A5SS	0.5	50	50	ENSMUST00000034086.13	ENSMUSG00000031661.13	Nkd1	chr8	protein_coding	naked cuticle 1
chr8	89309564	89309831	+	89300892	89309831	A5SS	0.5	50	50	ENSMUST00000034086.13	ENSMUSG00000031661.13	Nkd1	chr8	protein_coding	naked cuticle 1
chr8	89387272	89390260	+	89387272	89390326	A3SS	0.5	50	50	ENSMUST00000118370.8	ENSMUSG00000055994.16	Nod2	chr8	protein_coding	nucleotide-binding oligomerization domain containing 2
chr8	89378076	89379493	+	89374037	89379493	A5SS	0.5	50	50	ENSMUST00000118370.8	ENSMUSG00000055994.16	Nod2	chr8	protein_coding	nucleotide-binding oligomerization domain containing 2
chr8	89423727;89429066	89428933;89431854	+	89423727	89431854	cassetteExon	0.5	100	100	ENSMUST00000043526.15	ENSMUSG00000036712.16	Cyld	chr8	protein_coding	CYLD lysine 63 deubiquitinase
chr8	89436624	89442631	+	89436624	89445917	A3SS	0.25	50	50	ENSMUST00000043526.15	ENSMUSG00000036712.16	Cyld	chr8	protein_coding	CYLD lysine 63 deubiquitinase
chr8	89436624	89444918	+	89436624	89445917	A3SS	0.25	50	50	ENSMUST00000043526.15	ENSMUSG00000036712.16	Cyld	chr8	protein_coding	CYLD lysine 63 deubiquitinase
chr8	89436624	89445926	+	89436624	89445917	A3SS	0.25	50	50	ENSMUST00000043526.15	ENSMUSG00000036712.16	Cyld	chr8	protein_coding	CYLD lysine 63 deubiquitinase
chr8	89436624;89444926	89444918;89445926	+	89436624	89445926	cassetteExon	0.5	100	100	ENSMUST00000211554.2	ENSMUSG00000036712.16	Cyld	chr8	protein_coding	CYLD lysine 63 deubiquitinase
chr8	89436624	89442631	+	89436624	89445926	A3SS	0.25	50	50	ENSMUST00000211554.2	ENSMUSG00000036712.16	Cyld	chr8	protein_coding	CYLD lysine 63 deubiquitinase
chr8	89436624	89442631	+	89436624	89444918	A3SS	0.25	50	50	ENSMUST00000209532.2	ENSMUSG00000036712.16	Cyld	chr8	protein_coding	CYLD lysine 63 deubiquitinase
chr8	89423727	89431854	+	89429066	89431854	5pMXE	0.5	50	50	ENSMUST00000209206.2	ENSMUSG00000036712.16	Cyld	chr8	protein_coding	CYLD lysine 63 deubiquitinase
chr8	89449840	89456087	+	89449840	89458303	A3SS	0.5	50	50	ENSMUST00000209206.2	ENSMUSG00000036712.16	Cyld	chr8	protein_coding	CYLD lysine 63 deubiquitinase
chr8	89457449	89458303	+	89449840	89458303	A5SS	0.5	50	50	ENSMUST00000209206.2	ENSMUSG00000036712.16	Cyld	chr8	protein_coding	CYLD lysine 63 deubiquitinase
chr8	90997108	91001260	-	90997111	91001260	A3SS	0.5	50	50	ENSMUST00000109621.10	ENSMUSG00000043668.14	Tox3	chr8	protein_coding	TOX high mobility group box family member 3
chr8	90997108	91074491	-	91001322	91074491	A3SS&ES	0.5	50	50	ENSMUST00000109621.10	ENSMUSG00000043668.14	Tox3	chr8	protein_coding	TOX high mobility group box family member 3
chr8	90997108	91074491	-	90997108;91001322	91001260;91074491	ES	0.5	50	50	ENSMUST00000176616.8	ENSMUSG00000043668.14	Tox3	chr8	protein_coding	TOX high mobility group box family member 3
chr8	91753515	91759967	+	91753515;91757312	91757110;91759967	ES	0.5	50	50	ENSMUST00000048665.8	ENSMUSG00000056608.15	Chd9	chr8	protein_coding	chromodomain helicase DNA binding protein 9
chr8	91576387	91597999	+	91576387	91658877	A3SS	0.25	50	50	ENSMUST00000048665.8	ENSMUSG00000056608.15	Chd9	chr8	protein_coding	chromodomain helicase DNA binding protein 9
chr8	91576387	91600832	+	91576387	91658877	A3SS	0.25	50	50	ENSMUST00000048665.8	ENSMUSG00000056608.15	Chd9	chr8	protein_coding	chromodomain helicase DNA binding protein 9
chr8	91576387	91617605	+	91576387	91658877	A3SS	0.25	50	50	ENSMUST00000048665.8	ENSMUSG00000056608.15	Chd9	chr8	protein_coding	chromodomain helicase DNA binding protein 9
chr8	91760872	91761536	+	91760872	91761533	A3SS	0.5	50	50	ENSMUST00000048665.8	ENSMUSG00000056608.15	Chd9	chr8	protein_coding	chromodomain helicase DNA binding protein 9
chr8	91635432	91658877	+	91576387	91658877	A5SS	0.5	50	50	ENSMUST00000048665.8	ENSMUSG00000056608.15	Chd9	chr8	protein_coding	chromodomain helicase DNA binding protein 9
chr8	91681957	91683011	+	91660490	91683011	A5SS	0.33	50	50	ENSMUST00000048665.8	ENSMUSG00000056608.15	Chd9	chr8	protein_coding	chromodomain helicase DNA binding protein 9
chr8	91682310	91683011	+	91660490	91683011	A5SS	0.33	50	50	ENSMUST00000048665.8	ENSMUSG00000056608.15	Chd9	chr8	protein_coding	chromodomain helicase DNA binding protein 9
chr8	91683070	91699753	+	91683342	91699753	A5SS	0.5	50	50	ENSMUST00000048665.8	ENSMUSG00000056608.15	Chd9	chr8	protein_coding	chromodomain helicase DNA binding protein 9
chr8	91763226	91764035	+	91763178	91764035	A5SS	0.5	50	50	ENSMUST00000048665.8	ENSMUSG00000056608.15	Chd9	chr8	protein_coding	chromodomain helicase DNA binding protein 9
chr8	91576387	91597999	+	91576387	91617605	A3SS	0.25	50	50	ENSMUST00000209474.2	ENSMUSG00000056608.15	Chd9	chr8	protein_coding	chromodomain helicase DNA binding protein 9
chr8	91576387	91600832	+	91576387	91617605	A3SS	0.25	50	50	ENSMUST00000209474.2	ENSMUSG00000056608.15	Chd9	chr8	protein_coding	chromodomain helicase DNA binding protein 9
chr8	91576387	91597999	+	91576387	91600832	A3SS	0.25	50	50	ENSMUST00000211034.2	ENSMUSG00000056608.15	Chd9	chr8	protein_coding	chromodomain helicase DNA binding protein 9
chr8	91682310	91683011	+	91681957	91683011	A5SS	0.33	50	50	ENSMUST00000210947.2	ENSMUSG00000056608.15	Chd9	chr8	protein_coding	chromodomain helicase DNA binding protein 9
chr8	91805572	91812061	+	91805572;91810055	91809927;91812061	ES	0.5	50	50	ENSMUST00000034091.8	ENSMUSG00000031666.16	Rbl2	chr8	protein_coding	RB transcriptional corepressor like 2
chr8	91822286	91823422	+	91822286	91823392	A3SS	0.5	50	50	ENSMUST00000034091.8	ENSMUSG00000031666.16	Rbl2	chr8	protein_coding	RB transcriptional corepressor like 2
chr8	91856433	91860528	-	91856433	91857669	5pMXE	0.5	50	50	ENSMUST00000120426.9	ENSMUSG00000031667.17	Aktip	chr8	protein_coding	AKT interacting protein
chr8	91851306	91851451	-	91839258	91851451	A3SS	0.5	50	50	ENSMUST00000120426.9	ENSMUSG00000031667.17	Aktip	chr8	protein_coding	AKT interacting protein
chr8	91856471	91857669	-	91856433	91857669	A3SS	0.5	50	50	ENSMUST00000120426.9	ENSMUSG00000031667.17	Aktip	chr8	protein_coding	AKT interacting protein
chr8	91857780	91860528	-	91857780;91858631	91858551;91860528	ES	0.2	50	50	ENSMUST00000120213.9	ENSMUSG00000031667.17	Aktip	chr8	protein_coding	AKT interacting protein
chr8	91857780;91858517	91858465;91860528	-	91857780;91858631	91858551;91860528	MXE	0.5	100	100	ENSMUST00000120213.9	ENSMUSG00000031667.17	Aktip	chr8	protein_coding	AKT interacting protein
chr8	91857776	91860528	-	91858631	91860528	A3SS&ES	0.2	50	50	ENSMUST00000120213.9	ENSMUSG00000031667.17	Aktip	chr8	protein_coding	AKT interacting protein
chr8	91857780	91860162	-	91857780	91858551	A5SS&ES	0.25	50	50	ENSMUST00000120213.9	ENSMUSG00000031667.17	Aktip	chr8	protein_coding	AKT interacting protein
chr8	91857776	91894567	-	91857776	91860958	5pMXE	0.33	50	50	ENSMUST00000120349.8	ENSMUSG00000031667.17	Aktip	chr8	protein_coding	AKT interacting protein
chr8	91857776	91860528	-	91857776	91860958	A5SS	0.33	50	50	ENSMUST00000120349.8	ENSMUSG00000031667.17	Aktip	chr8	protein_coding	AKT interacting protein
chr8	91856433	91860528	-	91856433;91857780	91857669;91860528	ES	0.2	50	50	ENSMUST00000125257.3	ENSMUSG00000031667.17	Aktip	chr8	protein_coding	AKT interacting protein
chr8	91857780	91926513	-	91857780	91860528	5pMXE	0.2	50	50	ENSMUST00000125257.3	ENSMUSG00000031667.17	Aktip	chr8	protein_coding	AKT interacting protein
chr8	91857780;91858517	91858465;91860528	-	91857780	91860528	cassetteExon	0.5	100	100	ENSMUST00000125257.3	ENSMUSG00000031667.17	Aktip	chr8	protein_coding	AKT interacting protein
chr8	91857780;91858631	91858465;91860528	-	91857780	91860528	cassetteExon	0.5	100	100	ENSMUST00000125257.3	ENSMUSG00000031667.17	Aktip	chr8	protein_coding	AKT interacting protein
chr8	91857776	91860528	-	91857780	91860528	A3SS	0.2	50	50	ENSMUST00000125257.3	ENSMUSG00000031667.17	Aktip	chr8	protein_coding	AKT interacting protein
chr8	91857780	91860162	-	91857780	91860528	A5SS	0.2	50	50	ENSMUST00000125257.3	ENSMUSG00000031667.17	Aktip	chr8	protein_coding	AKT interacting protein
chr8	91856433	91860528	-	91856433;91857776	91857669;91860528	ES	0.2	50	50	ENSMUST00000109609.9	ENSMUSG00000031667.17	Aktip	chr8	protein_coding	AKT interacting protein
chr8	91857776	91894567	-	91857776	91860528	5pMXE	0.33	50	50	ENSMUST00000109609.9	ENSMUSG00000031667.17	Aktip	chr8	protein_coding	AKT interacting protein
chr8	91858517	91860528	-	91857776	91860528	A3SS	0.2	50	50	ENSMUST00000109609.9	ENSMUSG00000031667.17	Aktip	chr8	protein_coding	AKT interacting protein
chr8	91858517	91860528	-	91856433	91860528	A3SS	0.2	50	50	ENSMUST00000211050.2	ENSMUSG00000031667.17	Aktip	chr8	protein_coding	AKT interacting protein
chr8	91858631	91860528	-	91856433	91860528	A3SS	0.2	50	50	ENSMUST00000211050.2	ENSMUSG00000031667.17	Aktip	chr8	protein_coding	AKT interacting protein
chr8	91894651	91926513	-	91857780	91926513	A3SS	0.33	50	50	ENSMUST00000210426.2	ENSMUSG00000031667.17	Aktip	chr8	protein_coding	AKT interacting protein
chr8	91915970	91926513	-	91857780	91926513	A3SS	0.33	50	50	ENSMUST00000210426.2	ENSMUSG00000031667.17	Aktip	chr8	protein_coding	AKT interacting protein
chr8	91857780	91858465	-	91857780	91926513	A5SS	0.2	50	50	ENSMUST00000210426.2	ENSMUSG00000031667.17	Aktip	chr8	protein_coding	AKT interacting protein
chr8	91857780	91858551	-	91857780	91926513	A5SS	0.2	50	50	ENSMUST00000210426.2	ENSMUSG00000031667.17	Aktip	chr8	protein_coding	AKT interacting protein
chr8	91857780	91860162	-	91857780	91926513	A5SS	0.2	50	50	ENSMUST00000210426.2	ENSMUSG00000031667.17	Aktip	chr8	protein_coding	AKT interacting protein
chr8	91856433	91860528	-	91857780	91860528	A3SS&ES	0.2	50	50	ENSMUST00000211618.2	ENSMUSG00000031667.17	Aktip	chr8	protein_coding	AKT interacting protein
chr8	91857780	91858465	-	91857780	91860162	A5SS	0.2	50	50	ENSMUST00000209444.2	ENSMUSG00000031667.17	Aktip	chr8	protein_coding	AKT interacting protein
chr8	91915970	91926513	-	91894651	91926513	A3SS	0.33	50	50	ENSMUST00000209311.2	ENSMUSG00000031667.17	Aktip	chr8	protein_coding	AKT interacting protein
chr8	92007485	92014214	-	92007485;92012935	92012862;92014214	ES	0.5	50	50	ENSMUST00000047783.14	ENSMUSG00000033282.15	Rpgrip1l	chr8	protein_coding	Rpgrip1-like
chr8	92026000;92026467	92026391;92027406	-	92026000	92027406	cassetteExon	0.5	100	100	ENSMUST00000047783.14	ENSMUSG00000033282.15	Rpgrip1l	chr8	protein_coding	Rpgrip1-like
chr8	91959619	91968771	-	91959619	91975337	A5SS	0.5	50	50	ENSMUST00000047783.14	ENSMUSG00000033282.15	Rpgrip1l	chr8	protein_coding	Rpgrip1-like
chr8	92037057	92037548	-	92037057	92039831	A5SS	0.5	50	50	ENSMUST00000047783.14	ENSMUSG00000033282.15	Rpgrip1l	chr8	protein_coding	Rpgrip1-like
chr8	91990288	91996727	-	91979894	91996727	A3SS	0.5	50	50	ENSMUST00000209616.2	ENSMUSG00000033282.15	Rpgrip1l	chr8	protein_coding	Rpgrip1-like
chr8	91979894	91987373	-	91979894	91996727	A5SS	0.5	50	50	ENSMUST00000209616.2	ENSMUSG00000033282.15	Rpgrip1l	chr8	protein_coding	Rpgrip1-like
chr8	92136469	92194945	+	92136469;92168434	92168291;92194945	ES	0.33	50	50	ENSMUST00000069718.15	ENSMUSG00000055932.16	Fto	chr8	protein_coding	fat mass and obesity associated
chr8	92040248;92114405	92114366;92128435	+	92040248	92128435	cassetteExon	0.5	100	100	ENSMUST00000069718.15	ENSMUSG00000055932.16	Fto	chr8	protein_coding	fat mass and obesity associated
chr8	92118178	92128435	+	92040248	92128435	A5SS	0.33	50	50	ENSMUST00000069718.15	ENSMUSG00000055932.16	Fto	chr8	protein_coding	fat mass and obesity associated
chr8	92194490	92194945	+	92168434	92194945	A5SS	0.33	50	50	ENSMUST00000069718.15	ENSMUSG00000055932.16	Fto	chr8	protein_coding	fat mass and obesity associated
chr8	92136469	92194945	+	92136469	92168291	3pMXE	0.5	50	50	ENSMUST00000125471.8	ENSMUSG00000055932.16	Fto	chr8	protein_coding	fat mass and obesity associated
chr8	92118178	92128435	+	92114405	92128435	A5SS	0.33	50	50	ENSMUST00000166548.9	ENSMUSG00000055932.16	Fto	chr8	protein_coding	fat mass and obesity associated
chr8	92194490	92194945	+	92136469	92194945	A5SS	0.33	50	50	ENSMUST00000166548.9	ENSMUSG00000055932.16	Fto	chr8	protein_coding	fat mass and obesity associated
chr8	92526105	92526301	-	92526105	92526287	A5SS	0.5	50	50	ENSMUST00000093312.6	ENSMUSG00000031734.14	Irx3	chr8	protein_coding	Iroquois related homeobox 3
chr8	92528931	92530441	+	92527166	92530441	A5SS	0.5	50	50	ENSMUST00000133337.8	ENSMUSG00000046413.15	Irx3os	chr8	lncRNA	iroquois homeobox 3,  opposite strand
chr8	92704144	92716968	-	92701633	92716968	A3SS	0.5	50	50	ENSMUST00000210400.2	ENSMUSG00000109696.2	Gm36670	chr8	lncRNA	predicted gene, 36670
chr8	92717077	92718167	-	92717130	92718167	A3SS	0.5	50	50	ENSMUST00000210400.2	ENSMUSG00000109696.2	Gm36670	chr8	lncRNA	predicted gene, 36670
chr8	93062999	93071481	-	93053090	93071481	A3SS	0.5	50	50	ENSMUST00000178064.9	ENSMUSG00000031736.12	Crnde	chr8	lncRNA	colorectal neoplasia differentially expressed (non-protein coding)
chr8	93073540	93077319	-	93073732	93077319	A3SS&ES	0.33	50	50	ENSMUST00000179421.9	ENSMUSG00000031736.12	Crnde	chr8	lncRNA	colorectal neoplasia differentially expressed (non-protein coding)
chr8	93073546	93077319	-	93073732	93077319	A3SS&ES	0.33	50	50	ENSMUST00000179421.9	ENSMUSG00000031736.12	Crnde	chr8	lncRNA	colorectal neoplasia differentially expressed (non-protein coding)
chr8	93053090	93071481	-	93053090	93073598	A5SS	0.33	50	50	ENSMUST00000179421.9	ENSMUSG00000031736.12	Crnde	chr8	lncRNA	colorectal neoplasia differentially expressed (non-protein coding)
chr8	93053090;93073732	93073598;93077319	-	93053090;93073546	93071481;93077319	MXE	0.5	100	100	ENSMUST00000034183.10	ENSMUSG00000031736.12	Crnde	chr8	lncRNA	colorectal neoplasia differentially expressed (non-protein coding)
chr8	93073540	93077319	-	93073546	93077319	A3SS	0.33	50	50	ENSMUST00000034183.10	ENSMUSG00000031736.12	Crnde	chr8	lncRNA	colorectal neoplasia differentially expressed (non-protein coding)
chr8	93077382	93082316	-	93053090	93082316	A3SS	0.5	50	50	ENSMUST00000179029.2	ENSMUSG00000031736.12	Crnde	chr8	lncRNA	colorectal neoplasia differentially expressed (non-protein coding)
chr8	93053090	93071481	-	93053090	93082316	A5SS	0.33	50	50	ENSMUST00000179029.2	ENSMUSG00000031736.12	Crnde	chr8	lncRNA	colorectal neoplasia differentially expressed (non-protein coding)
chr8	93053090	93073598	-	93053090	93082316	A5SS	0.33	50	50	ENSMUST00000179029.2	ENSMUSG00000031736.12	Crnde	chr8	lncRNA	colorectal neoplasia differentially expressed (non-protein coding)
chr8	93405445	93406277	+	93405445	93406274	A3SS	0.5	50	50	ENSMUST00000034185.13	ENSMUSG00000031738.15	Irx6	chr8	protein_coding	Iroquois homeobox 6
chr8	93570245	93570448	+	93567159	93570448	A5SS	0.5	50	50	ENSMUST00000034187.9	ENSMUSG00000031740.9	Mmp2	chr8	protein_coding	matrix metallopeptidase 2
chr8	93597878	93600861	+	93597878;93599736	93599676;93600861	ES	0.5	50	50	ENSMUST00000046290.3	ENSMUSG00000033192.6	Lpcat2	chr8	protein_coding	lysophosphatidylcholine acyltransferase 2
chr8	93635597	93635815	+	93617454	93635815	A5SS	0.5	50	50	ENSMUST00000046290.3	ENSMUSG00000033192.6	Lpcat2	chr8	protein_coding	lysophosphatidylcholine acyltransferase 2
chr8	93597878;93600919	93600861;93602183	+	93597878	93602183	cassetteExon	0.5	100	100	ENSMUST00000210099.2	ENSMUSG00000033192.6	Lpcat2	chr8	protein_coding	lysophosphatidylcholine acyltransferase 2
chr8	93597878	93599676	+	93597878	93602183	A3SS	0.33	50	50	ENSMUST00000210099.2	ENSMUSG00000033192.6	Lpcat2	chr8	protein_coding	lysophosphatidylcholine acyltransferase 2
chr8	93760013	93767372	+	93744981	93767372	A5SS	0.5	50	50	ENSMUST00000210764.2	ENSMUSG00000109651.2	Gm45463	chr8	lncRNA	predicted gene 45463
chr8	93758517	93759901	+	93754163	93759901	A5SS	0.5	50	50	ENSMUST00000210735.2	ENSMUSG00000109651.2	Gm45463	chr8	lncRNA	predicted gene 45463
chr8	93766210	93767466	-	93766210	93768591	A5SS	0.5	50	50	ENSMUST00000095211.5	ENSMUSG00000071047.6	Ces1a	chr8	protein_coding	carboxylesterase 1A
chr8	93847000;93847266	93847240;93849728	-	93847000	93849728	cassetteExon	0.5	100	100	ENSMUST00000034189.17	ENSMUSG00000057400.15	Ces1c	chr8	protein_coding	carboxylesterase 1C
chr8	93950727	93955998	-	93950730	93955998	A3SS	0.5	50	50	ENSMUST00000034173.14	ENSMUSG00000061959.14	Ces1e	chr8	protein_coding	carboxylesterase 1E
chr8	94002074;94003257	94003184;94006277	-	94002074	94006277	cassetteExon	0.5	100	100	ENSMUST00000034178.9	ENSMUSG00000031725.9	Ces1f	chr8	protein_coding	carboxylesterase 1F
chr8	94154136	94156796	+	94090403	94156796	A5SS	0.5	50	50	ENSMUST00000212027.2	ENSMUSG00000110718.2	Gm45765	chr8	lncRNA	predicted gene 45765
chr8	94228254	94228806	-	94226388	94228806	A3SS	0.5	50	50	ENSMUST00000212009.2	ENSMUSG00000058019.14	Ces5a	chr8	protein_coding	carboxylesterase 5A
chr8	94228955	94233030	-	94228955	94240823	A5SS	0.33	50	50	ENSMUST00000212009.2	ENSMUSG00000058019.14	Ces5a	chr8	protein_coding	carboxylesterase 5A
chr8	94228955	94240091	-	94228955	94240823	A5SS	0.33	50	50	ENSMUST00000212009.2	ENSMUSG00000058019.14	Ces5a	chr8	protein_coding	carboxylesterase 5A
chr8	94261340	94262251	-	94261340	94262263	A5SS	0.5	50	50	ENSMUST00000212009.2	ENSMUSG00000058019.14	Ces5a	chr8	protein_coding	carboxylesterase 5A
chr8	94228955	94240091	-	94228955	94233030	5pMXE	0.33	50	50	ENSMUST00000080391.14	ENSMUSG00000058019.14	Ces5a	chr8	protein_coding	carboxylesterase 5A
chr8	94294088	94301956	-	94294088	94314836	A5SS	0.5	50	50	ENSMUST00000212785.2	ENSMUSG00000110534.2	Gm45708	chr8	lncRNA	predicted gene 45708
chr8	94535512	94538249	-	94535512	94536313	5pMXE	0.5	50	50	ENSMUST00000181864.3	ENSMUSG00000097520.3	4930488L21Rik	chr8	lncRNA	RIKEN cDNA 4930488L21 gene
chr8	94524018	94535364	-	94479263	94535364	A3SS	0.5	50	50	ENSMUST00000181864.3	ENSMUSG00000097520.3	4930488L21Rik	chr8	lncRNA	RIKEN cDNA 4930488L21 gene
chr8	94538081	94538279	+	94536757	94538279	A5SS	0.5	50	50	ENSMUST00000137202.8	ENSMUSG00000031748.17	Gnao1	chr8	protein_coding	guanine nucleotide binding protein, alpha O
chr8	94690165	94694660	+	94690165;94693711	94693496;94694660	ES	0.33	50	50	ENSMUST00000034198.15	ENSMUSG00000031748.17	Gnao1	chr8	protein_coding	guanine nucleotide binding protein, alpha O
chr8	94677059	94680603	+	94677059	94690012	A3SS	0.5	50	50	ENSMUST00000034198.15	ENSMUSG00000031748.17	Gnao1	chr8	protein_coding	guanine nucleotide binding protein, alpha O
chr8	94693617	94694660	+	94693711	94694660	A5SS	0.33	50	50	ENSMUST00000034198.15	ENSMUSG00000031748.17	Gnao1	chr8	protein_coding	guanine nucleotide binding protein, alpha O
chr8	94690165	94694660	+	94690165	94693496	A3SS	0.5	50	50	ENSMUST00000125716.8	ENSMUSG00000031748.17	Gnao1	chr8	protein_coding	guanine nucleotide binding protein, alpha O
chr8	94679652	94680603	+	94677059	94680603	A5SS	0.5	50	50	ENSMUST00000138659.9	ENSMUSG00000031748.17	Gnao1	chr8	protein_coding	guanine nucleotide binding protein, alpha O
chr8	94670986	94676032	+	94670986	94690012	A3SS	0.5	50	50	ENSMUST00000127900.2	ENSMUSG00000031748.17	Gnao1	chr8	protein_coding	guanine nucleotide binding protein, alpha O
chr8	94677059	94690012	+	94670986	94690012	A5SS	0.5	50	50	ENSMUST00000127900.2	ENSMUSG00000031748.17	Gnao1	chr8	protein_coding	guanine nucleotide binding protein, alpha O
chr8	94690165	94694660	+	94690165;94693617	94693496;94694660	ES	0.33	50	50	ENSMUST00000142466.2	ENSMUSG00000031748.17	Gnao1	chr8	protein_coding	guanine nucleotide binding protein, alpha O
chr8	94699942	94700555	-	94699942	94700687	A5SS	0.5	50	50	ENSMUST00000053766.14	ENSMUSG00000031751.15	Amfr	chr8	protein_coding	autocrine motility factor receptor
chr8	94731853	94738636	-	94731853	94738847	A5SS	0.5	50	50	ENSMUST00000053766.14	ENSMUSG00000031751.15	Amfr	chr8	protein_coding	autocrine motility factor receptor
chr8	94746332	94751170	-	94746332;94749517	94749403;94751170	ES	0.5	50	50	ENSMUST00000034204.11	ENSMUSG00000031754.11	Nudt21	chr8	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 21
chr8	94759130	94763254	-	94759130	94763405	A5SS	0.5	50	50	ENSMUST00000034204.11	ENSMUSG00000031754.11	Nudt21	chr8	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 21
chr8	94746332	94751170	-	94749517	94751170	3pMXE	0.5	50	50	ENSMUST00000212911.2	ENSMUSG00000031754.11	Nudt21	chr8	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 21
chr8	94764070	94773900	+	94764070;94765738	94765593;94773900	ES	0.5	50	50	ENSMUST00000109556.9	ENSMUSG00000033009.16	Ogfod1	chr8	protein_coding	2-oxoglutarate and iron-dependent oxygenase domain containing 1
chr8	94781972	94782672	+	94781972;94782292	94782164;94782672	ES	0.5	50	50	ENSMUST00000109556.9	ENSMUSG00000033009.16	Ogfod1	chr8	protein_coding	2-oxoglutarate and iron-dependent oxygenase domain containing 1
chr8	94764070	94765596	+	94764070	94765593	A3SS	0.33	50	50	ENSMUST00000109556.9	ENSMUSG00000033009.16	Ogfod1	chr8	protein_coding	2-oxoglutarate and iron-dependent oxygenase domain containing 1
chr8	94764070	94773900	+	94764070	94765593	3pMXE	0.33	50	50	ENSMUST00000141636.2	ENSMUSG00000033009.16	Ogfod1	chr8	protein_coding	2-oxoglutarate and iron-dependent oxygenase domain containing 1
chr8	94764070;94765738	94765596;94773900	+	94764070	94773900	cassetteExon	0.5	100	100	ENSMUST00000127634.8	ENSMUSG00000033009.16	Ogfod1	chr8	protein_coding	2-oxoglutarate and iron-dependent oxygenase domain containing 1
chr8	94801888	94803585	-	94801888	94803580	A5SS	0.5	50	50	ENSMUST00000034206.6	ENSMUSG00000031755.7	Bbs2	chr8	protein_coding	Bardet-Biedl syndrome 2 (human)
chr8	94879718	94880325	+	94879718	94880529	A3SS	0.5	50	50	ENSMUST00000034211.10	ENSMUSG00000031760.10	Mt3	chr8	protein_coding	metallothionein 3
chr8	94899580	94899755	+	94899503	94899755	A5SS	0.5	50	50	ENSMUST00000034214.8	ENSMUSG00000031762.8	Mt2	chr8	protein_coding	metallothionein 2
chr8	94941259;94947239	94947188;94954291	+	94941259	94954291	cassetteExon	0.5	100	100	ENSMUST00000079961.14	ENSMUSG00000032939.15	Nup93	chr8	protein_coding	nucleoporin 93
chr8	94993851	95007899	+	94970399	95007899	A5SS	0.33	50	50	ENSMUST00000079961.14	ENSMUSG00000032939.15	Nup93	chr8	protein_coding	nucleoporin 93
chr8	94995485	95007899	+	94970399	95007899	A5SS	0.33	50	50	ENSMUST00000079961.14	ENSMUSG00000032939.15	Nup93	chr8	protein_coding	nucleoporin 93
chr8	95022666	95023078	+	95021738	95023078	A5SS	0.5	50	50	ENSMUST00000079961.14	ENSMUSG00000032939.15	Nup93	chr8	protein_coding	nucleoporin 93
chr8	94995485	95007899	+	94993851	95007899	A5SS	0.33	50	50	ENSMUST00000212167.2	ENSMUSG00000032939.15	Nup93	chr8	protein_coding	nucleoporin 93
chr8	95085151	95085361	+	95085151	95092448	A3SS	0.5	50	50	ENSMUST00000034218.5	ENSMUSG00000031766.5	Slc12a3	chr8	protein_coding	solute carrier family 12, member 3
chr8	95116061	95116152	+	95116061	95116149	A3SS	0.5	50	50	ENSMUST00000161576.8	ENSMUSG00000031770.17	Herpud1	chr8	protein_coding	homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
chr8	95114208	95115984	+	95113366	95115984	A5SS	0.33	50	50	ENSMUST00000161576.8	ENSMUSG00000031770.17	Herpud1	chr8	protein_coding	homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
chr8	95114314	95115984	+	95113366	95115984	A5SS	0.33	50	50	ENSMUST00000161576.8	ENSMUSG00000031770.17	Herpud1	chr8	protein_coding	homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
chr8	95114314	95115984	+	95114208	95115984	A5SS	0.33	50	50	ENSMUST00000161085.8	ENSMUSG00000031770.17	Herpud1	chr8	protein_coding	homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
chr8	95161061;95186427	95186320;95196445	+	95161061;95172761	95172686;95196445	MXE	0.5	100	100	ENSMUST00000212382.2	ENSMUSG00000074151.14	Nlrc5	chr8	protein_coding	NLR family, CARD domain containing 5
chr8	95172761;95186427	95186320;95196445	+	95172761	95196445	cassetteExon	0.5	100	100	ENSMUST00000212382.2	ENSMUSG00000074151.14	Nlrc5	chr8	protein_coding	NLR family, CARD domain containing 5
chr8	95161061	95186320	+	95161061;95172761	95172686;95186320	ES	0.5	50	50	ENSMUST00000211816.2	ENSMUSG00000074151.14	Nlrc5	chr8	protein_coding	NLR family, CARD domain containing 5
chr8	95210784	95211166	+	95210760	95211166	A5SS	0.5	50	50	ENSMUST00000211816.2	ENSMUSG00000074151.14	Nlrc5	chr8	protein_coding	NLR family, CARD domain containing 5
chr8	95275173	95275964	+	95275173	95277798	A3SS	0.5	50	50	ENSMUST00000048653.10	ENSMUSG00000034361.11	Cpne2	chr8	protein_coding	copine II
chr8	95290718	95295222	+	95290718	95295219	A3SS	0.5	50	50	ENSMUST00000048653.10	ENSMUSG00000034361.11	Cpne2	chr8	protein_coding	copine II
chr8	95282686	95284048	+	95282686	95286737	A3SS	0.5	50	50	ENSMUST00000212550.2	ENSMUSG00000034361.11	Cpne2	chr8	protein_coding	copine II
chr8	95284886	95286737	+	95282686	95286737	A5SS	0.5	50	50	ENSMUST00000212550.2	ENSMUSG00000034361.11	Cpne2	chr8	protein_coding	copine II
chr8	95302485;95302847	95302735;95306028	-	95302485	95306028	cassetteExon	0.5	100	100	ENSMUST00000034226.8	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035;95317916	95317801;95328125	-	95316035	95328125	cassetteExon	0.5	100	100	ENSMUST00000034226.8	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035;95318330	95318197;95328125	-	95316035	95328125	cassetteExon	0.5	100	100	ENSMUST00000034226.8	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035;95323736	95323679;95328125	-	95316035	95328125	cassetteExon	0.5	100	100	ENSMUST00000034226.8	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035	95328031	-	95316035	95328125	A5SS	0.14	50	50	ENSMUST00000034226.8	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035	95328172	-	95316035	95328125	A5SS	0.14	50	50	ENSMUST00000034226.8	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035	95328263	-	95316035	95328125	A5SS	0.14	50	50	ENSMUST00000034226.8	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035	95328125	-	95306092	95328125	A3SS	0.2	50	50	ENSMUST00000212262.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95317916	95328125	-	95306092	95328125	A3SS	0.2	50	50	ENSMUST00000212262.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95318330	95328125	-	95306092	95328125	A3SS	0.2	50	50	ENSMUST00000212262.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95323736	95328125	-	95306092	95328125	A3SS	0.2	50	50	ENSMUST00000212262.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95306092	95309512	-	95306092	95328125	A5SS	0.5	50	50	ENSMUST00000212262.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035	95328263	-	95316035;95323736	95323679;95328263	ES	0.5	50	50	ENSMUST00000212791.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035;95317916	95317801;95323679	-	95316035	95323679	cassetteExon	0.5	100	100	ENSMUST00000212791.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035;95318330	95318197;95323679	-	95316035	95323679	cassetteExon	0.5	100	100	ENSMUST00000212791.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035	95328031	-	95316035	95323679	A5SS&ES	0.14	50	50	ENSMUST00000212791.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035	95328125	-	95316035	95323679	A5SS&ES	0.14	50	50	ENSMUST00000212791.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035	95328172	-	95316035	95323679	A5SS&ES	0.14	50	50	ENSMUST00000212791.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95323736	95328125	-	95323736	95328263	A5SS	0.5	50	50	ENSMUST00000212791.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035;95317916	95317801;95328172	-	95316035	95328172	cassetteExon	0.5	100	100	ENSMUST00000213022.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035	95318197	-	95316035	95328172	A5SS	0.14	50	50	ENSMUST00000213022.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035	95328031	-	95316035	95328172	A5SS	0.14	50	50	ENSMUST00000213022.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035	95328263	-	95316035	95328172	A5SS	0.14	50	50	ENSMUST00000213022.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035	95328263	-	95316035	95328031	5pMXE	0.14	50	50	ENSMUST00000212083.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035	95317801	-	95316035	95328031	A5SS	0.14	50	50	ENSMUST00000212083.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035	95318197	-	95316035	95328031	A5SS	0.14	50	50	ENSMUST00000212083.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95317916	95328125	-	95317916;95323736	95323679;95328125	ES	0.25	50	50	ENSMUST00000213008.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035;95318330	95318197;95323679	-	95316035;95317916	95317801;95323679	MXE	0.5	100	100	ENSMUST00000213008.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035;95318330	95318197;95328125	-	95316035;95323736	95317801;95328125	MXE	0.5	100	100	ENSMUST00000213008.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035	95328172	-	95316035	95317801	A5SS&ES	0.14	50	50	ENSMUST00000213008.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035	95328263	-	95316035	95317801	A5SS&ES	0.14	50	50	ENSMUST00000213008.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95317916	95328172	-	95317916	95323679	A5SS&ES	0.33	50	50	ENSMUST00000213008.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035;95317916	95317801;95328125	-	95316035;95318330	95318197;95328125	MXE	0.5	100	100	ENSMUST00000212159.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035;95323736	95323679;95328125	-	95316035;95318330	95318197;95328125	MXE	0.5	100	100	ENSMUST00000212159.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95318330;95323736	95323679;95328125	-	95318330	95328125	cassetteExon	0.5	100	100	ENSMUST00000212159.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035	95328263	-	95316035	95318197	A5SS&ES	0.14	50	50	ENSMUST00000212159.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035;95323736	95323679;95328125	-	95316035;95317916	95317801;95328125	MXE	0.5	100	100	ENSMUST00000212258.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95317916	95328172	-	95317916	95328125	A5SS	0.33	50	50	ENSMUST00000212258.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035	95318197	-	95316035	95317801	A5SS&ES	0.14	50	50	ENSMUST00000212765.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035	95323679	-	95316035	95317801	A5SS&ES	0.14	50	50	ENSMUST00000212765.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035	95328125	-	95316035	95317801	A5SS&ES	0.14	50	50	ENSMUST00000212765.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035	95328263	-	95316035	95323679	A5SS&ES	0.14	50	50	ENSMUST00000212547.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95316035	95323679	-	95318330	95323679	3pMXE	0.33	50	50	ENSMUST00000212429.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95317916	95323679	-	95318330	95323679	3pMXE	0.33	50	50	ENSMUST00000212429.2	ENSMUSG00000031774.9	Psme3ip1	chr8	protein_coding	proteasome activator subunit 3 interacting protein 1
chr8	95329058	95355684	+	95329058;95349963	95349462;95355684	ES	0.5	50	50	ENSMUST00000060389.10	ENSMUSG00000050079.11	Rspry1	chr8	protein_coding	ring finger and SPRY domain containing 1
chr8	95328732	95349462	+	95329058	95349462	A5SS	0.5	50	50	ENSMUST00000060389.10	ENSMUSG00000050079.11	Rspry1	chr8	protein_coding	ring finger and SPRY domain containing 1
chr8	95329058	95349462	+	95329058	95355684	A3SS	0.5	50	50	ENSMUST00000212729.2	ENSMUSG00000050079.11	Rspry1	chr8	protein_coding	ring finger and SPRY domain containing 1
chr8	95349963	95355684	+	95329058	95355684	A5SS	0.5	50	50	ENSMUST00000212729.2	ENSMUSG00000050079.11	Rspry1	chr8	protein_coding	ring finger and SPRY domain containing 1
chr8	95397055	95398690	+	95397055;95398008	95397923;95398690	ES	0.5	50	50	ENSMUST00000034228.16	ENSMUSG00000031776.18	Arl2bp	chr8	protein_coding	ADP-ribosylation factor-like 2 binding protein
chr8	95393858	95394225	+	95393529	95394225	A5SS	0.5	50	50	ENSMUST00000034228.16	ENSMUSG00000031776.18	Arl2bp	chr8	protein_coding	ADP-ribosylation factor-like 2 binding protein
chr8	95397055	95398690	+	95397055	95397923	A3SS&ES	0.5	50	50	ENSMUST00000211858.2	ENSMUSG00000031776.18	Arl2bp	chr8	protein_coding	ADP-ribosylation factor-like 2 binding protein
chr8	95403976	95405166	-	95403976	95405973	A5SS	0.5	50	50	ENSMUST00000034227.6	ENSMUSG00000031775.6	Pllp	chr8	protein_coding	plasma membrane proteolipid
chr8	95406146	95406623	-	95406146	95422664	A5SS	0.5	50	50	ENSMUST00000034227.6	ENSMUSG00000031775.6	Pllp	chr8	protein_coding	plasma membrane proteolipid
chr8	95472414;95473161	95473053;95473530	+	95472414	95473530	cassetteExon	0.5	100	100	ENSMUST00000034231.4	ENSMUSG00000031779.4	Ccl22	chr8	protein_coding	chemokine (C-C motif) ligand 22
chr8	95498962	95506188	+	95498962;95504776	95504656;95506188	ES	0.5	50	50	ENSMUST00000034230.7	ENSMUSG00000031778.14	Cx3cl1	chr8	protein_coding	chemokine (C-X3-C motif) ligand 1
chr8	95498962;95503328	95503228;95504656	+	95498962	95504656	cassetteExon	0.5	100	100	ENSMUST00000034230.7	ENSMUSG00000031778.14	Cx3cl1	chr8	protein_coding	chemokine (C-X3-C motif) ligand 1
chr8	95498962;95504021	95503936;95504656	+	95498962	95504656	cassetteExon	0.5	100	100	ENSMUST00000034230.7	ENSMUSG00000031778.14	Cx3cl1	chr8	protein_coding	chemokine (C-X3-C motif) ligand 1
chr8	95504776	95505364	+	95504776	95506188	A3SS	0.5	50	50	ENSMUST00000034230.7	ENSMUSG00000031778.14	Cx3cl1	chr8	protein_coding	chemokine (C-X3-C motif) ligand 1
chr8	95498962	95506188	+	95498962	95504656	3pMXE	0.25	50	50	ENSMUST00000211956.2	ENSMUSG00000031778.14	Cx3cl1	chr8	protein_coding	chemokine (C-X3-C motif) ligand 1
chr8	95498962;95504021	95503936;95504656	+	95498962;95503328	95503228;95504656	MXE	0.5	100	100	ENSMUST00000135970.2	ENSMUSG00000031778.14	Cx3cl1	chr8	protein_coding	chemokine (C-X3-C motif) ligand 1
chr8	95498962	95503228	+	95498962	95506188	A3SS	0.25	50	50	ENSMUST00000211947.2	ENSMUSG00000031778.14	Cx3cl1	chr8	protein_coding	chemokine (C-X3-C motif) ligand 1
chr8	95498962	95503936	+	95498962	95506188	A3SS	0.25	50	50	ENSMUST00000211947.2	ENSMUSG00000031778.14	Cx3cl1	chr8	protein_coding	chemokine (C-X3-C motif) ligand 1
chr8	95550359	95553263	-	95550359;95551959	95551844;95553263	ES	0.5	50	50	ENSMUST00000162538.9	ENSMUSG00000031781.15	Ciapin1	chr8	protein_coding	cytokine induced apoptosis inhibitor 1
chr8	95551959	95554905	-	95551959;95553336	95553263;95554905	ES	0.5	50	50	ENSMUST00000162538.9	ENSMUSG00000031781.15	Ciapin1	chr8	protein_coding	cytokine induced apoptosis inhibitor 1
chr8	95555858	95559143	-	95555858;95558553	95558401;95559143	ES	0.5	50	50	ENSMUST00000162538.9	ENSMUSG00000031781.15	Ciapin1	chr8	protein_coding	cytokine induced apoptosis inhibitor 1
chr8	95558553	95564582	-	95558553	95559143	A5SS&ES	0.5	50	50	ENSMUST00000162538.9	ENSMUSG00000031781.15	Ciapin1	chr8	protein_coding	cytokine induced apoptosis inhibitor 1
chr8	95559328	95564582	-	95559328	95564880	A5SS	0.5	50	50	ENSMUST00000162538.9	ENSMUSG00000031781.15	Ciapin1	chr8	protein_coding	cytokine induced apoptosis inhibitor 1
chr8	95558553	95564582	-	95558553;95559328	95559143;95564582	ES	0.5	50	50	ENSMUST00000034233.15	ENSMUSG00000031781.15	Ciapin1	chr8	protein_coding	cytokine induced apoptosis inhibitor 1
chr8	95555858	95559143	-	95555858	95558401	5pMXE	0.5	50	50	ENSMUST00000161762.4	ENSMUSG00000031781.15	Ciapin1	chr8	protein_coding	cytokine induced apoptosis inhibitor 1
chr8	95551959	95554905	-	95551959	95553263	A5SS&ES	0.5	50	50	ENSMUST00000161762.4	ENSMUSG00000031781.15	Ciapin1	chr8	protein_coding	cytokine induced apoptosis inhibitor 1
chr8	95550359	95553263	-	95551959	95553263	3pMXE	0.5	50	50	ENSMUST00000160898.2	ENSMUSG00000031781.15	Ciapin1	chr8	protein_coding	cytokine induced apoptosis inhibitor 1
chr8	95577227	95579743	+	95577227;95578583	95578479;95579743	ES	0.5	50	50	ENSMUST00000034234.15	ENSMUSG00000031782.16	Coq9	chr8	protein_coding	coenzyme Q9
chr8	95577267	95578479	+	95577227	95578479	A5SS	0.5	50	50	ENSMUST00000034234.15	ENSMUSG00000031782.16	Coq9	chr8	protein_coding	coenzyme Q9
chr8	95577227	95579743	+	95578583	95579743	A5SS&ES	0.5	50	50	ENSMUST00000159638.8	ENSMUSG00000031782.16	Coq9	chr8	protein_coding	coenzyme Q9
chr8	95586940	95588339	+	95586940;95587124	95587072;95588339	ES	0.5	50	50	ENSMUST00000109521.4	ENSMUSG00000031783.11	Polr2c	chr8	protein_coding	polymerase (RNA) II (DNA directed) polypeptide C
chr8	95588861	95589438	+	95588861;95589317	95589149;95589438	ES	0.5	50	50	ENSMUST00000109521.4	ENSMUSG00000031783.11	Polr2c	chr8	protein_coding	polymerase (RNA) II (DNA directed) polypeptide C
chr8	95589512	95593990	+	95589512	95590080	3pMXE	0.5	50	50	ENSMUST00000109521.4	ENSMUSG00000031783.11	Polr2c	chr8	protein_coding	polymerase (RNA) II (DNA directed) polypeptide C
chr8	95588467;95588771	95588702;95589149	+	95588467;95588861	95588810;95589149	MXE	0.5	100	100	ENSMUST00000109521.4	ENSMUSG00000031783.11	Polr2c	chr8	protein_coding	polymerase (RNA) II (DNA directed) polypeptide C
chr8	95588467	95588702	+	95588467	95588810	A3SS	0.5	50	50	ENSMUST00000212124.2	ENSMUSG00000031783.11	Polr2c	chr8	protein_coding	polymerase (RNA) II (DNA directed) polypeptide C
chr8	95588861	95589438	+	95588861	95589149	A3SS	0.5	50	50	ENSMUST00000212848.2	ENSMUSG00000031783.11	Polr2c	chr8	protein_coding	polymerase (RNA) II (DNA directed) polypeptide C
chr8	95597696	95598254	-	95597696	95602759	A5SS	0.33	50	50	ENSMUST00000046461.9	ENSMUSG00000040631.9	Dok4	chr8	protein_coding	docking protein 4
chr8	95597696	95602520	-	95597696	95602759	A5SS	0.33	50	50	ENSMUST00000046461.9	ENSMUSG00000040631.9	Dok4	chr8	protein_coding	docking protein 4
chr8	95597696	95602520	-	95597696	95598254	5pMXE	0.33	50	50	ENSMUST00000211892.2	ENSMUSG00000040631.9	Dok4	chr8	protein_coding	docking protein 4
chr8	95640436	95643950	-	95640436	95644610	A5SS	0.5	50	50	ENSMUST00000077955.6	ENSMUSG00000063605.6	Ccdc102a	chr8	protein_coding	coiled-coil domain containing 102A
chr8	95650385	95659976	+	95650385	95659971	A3SS	0.5	50	50	ENSMUST00000153448.9	ENSMUSG00000061577.13	Adgrg5	chr8	protein_coding	adhesion G protein-coupled receptor G5
chr8	95660199	95660503	+	95660199	95660660	A3SS	0.33	50	50	ENSMUST00000153448.9	ENSMUSG00000061577.13	Adgrg5	chr8	protein_coding	adhesion G protein-coupled receptor G5
chr8	95660199	95660515	+	95660199	95660660	A3SS	0.33	50	50	ENSMUST00000153448.9	ENSMUSG00000061577.13	Adgrg5	chr8	protein_coding	adhesion G protein-coupled receptor G5
chr8	95660997	95661089	+	95660783	95661089	A5SS	0.33	50	50	ENSMUST00000153448.9	ENSMUSG00000061577.13	Adgrg5	chr8	protein_coding	adhesion G protein-coupled receptor G5
chr8	95660199	95660515	+	95660199	95660503	A3SS	0.33	50	50	ENSMUST00000166802.9	ENSMUSG00000061577.13	Adgrg5	chr8	protein_coding	adhesion G protein-coupled receptor G5
chr8	95663140	95663852	+	95663140	95663849	A3SS	0.5	50	50	ENSMUST00000166802.9	ENSMUSG00000061577.13	Adgrg5	chr8	protein_coding	adhesion G protein-coupled receptor G5
chr8	95660783	95661089	+	95660659	95661089	A5SS	0.33	50	50	ENSMUST00000166802.9	ENSMUSG00000061577.13	Adgrg5	chr8	protein_coding	adhesion G protein-coupled receptor G5
chr8	95660997	95661089	+	95660659	95661089	A5SS	0.33	50	50	ENSMUST00000166802.9	ENSMUSG00000061577.13	Adgrg5	chr8	protein_coding	adhesion G protein-coupled receptor G5
chr8	95729141	95729864	+	95729141	95729879	A3SS	0.5	50	50	ENSMUST00000211850.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95703678	95729067	+	95701524	95729067	A5SS	0.09	50	50	ENSMUST00000211850.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95704045	95729067	+	95701524	95729067	A5SS	0.09	50	50	ENSMUST00000211850.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95711285	95729067	+	95701524	95729067	A5SS	0.09	50	50	ENSMUST00000211850.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95712310	95729067	+	95701524	95729067	A5SS	0.09	50	50	ENSMUST00000211850.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95721117	95729067	+	95701524	95729067	A5SS	0.09	50	50	ENSMUST00000211850.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95721521	95729067	+	95701524	95729067	A5SS	0.09	50	50	ENSMUST00000211850.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95721627	95729067	+	95701524	95729067	A5SS	0.09	50	50	ENSMUST00000211850.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95722426	95729067	+	95701524	95729067	A5SS	0.09	50	50	ENSMUST00000211850.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95724044	95729067	+	95701524	95729067	A5SS	0.09	50	50	ENSMUST00000211850.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95727610	95729067	+	95701524	95729067	A5SS	0.09	50	50	ENSMUST00000211850.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95704045	95729067	+	95703678	95729067	A5SS	0.09	50	50	ENSMUST00000212581.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95711285	95729067	+	95703678	95729067	A5SS	0.09	50	50	ENSMUST00000212581.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95712310	95729067	+	95703678	95729067	A5SS	0.09	50	50	ENSMUST00000212581.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95721117	95729067	+	95703678	95729067	A5SS	0.09	50	50	ENSMUST00000212581.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95721521	95729067	+	95703678	95729067	A5SS	0.09	50	50	ENSMUST00000212581.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95721627	95729067	+	95703678	95729067	A5SS	0.09	50	50	ENSMUST00000212581.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95722426	95729067	+	95703678	95729067	A5SS	0.09	50	50	ENSMUST00000212581.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95724044	95729067	+	95703678	95729067	A5SS	0.09	50	50	ENSMUST00000212581.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95727610	95729067	+	95703678	95729067	A5SS	0.09	50	50	ENSMUST00000212581.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95711285	95729067	+	95704045	95729067	A5SS	0.09	50	50	ENSMUST00000179619.9	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95712310	95729067	+	95704045	95729067	A5SS	0.09	50	50	ENSMUST00000179619.9	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95721117	95729067	+	95704045	95729067	A5SS	0.09	50	50	ENSMUST00000179619.9	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95721521	95729067	+	95704045	95729067	A5SS	0.09	50	50	ENSMUST00000179619.9	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95721627	95729067	+	95704045	95729067	A5SS	0.09	50	50	ENSMUST00000179619.9	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95722426	95729067	+	95704045	95729067	A5SS	0.09	50	50	ENSMUST00000179619.9	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95724044	95729067	+	95704045	95729067	A5SS	0.09	50	50	ENSMUST00000179619.9	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95727610	95729067	+	95704045	95729067	A5SS	0.09	50	50	ENSMUST00000179619.9	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95712310	95729067	+	95711285	95729067	A5SS	0.09	50	50	ENSMUST00000093271.8	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95721117	95729067	+	95711285	95729067	A5SS	0.09	50	50	ENSMUST00000093271.8	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95721521	95729067	+	95711285	95729067	A5SS	0.09	50	50	ENSMUST00000093271.8	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95721627	95729067	+	95711285	95729067	A5SS	0.09	50	50	ENSMUST00000093271.8	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95722426	95729067	+	95711285	95729067	A5SS	0.09	50	50	ENSMUST00000093271.8	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95724044	95729067	+	95711285	95729067	A5SS	0.09	50	50	ENSMUST00000093271.8	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95727610	95729067	+	95711285	95729067	A5SS	0.09	50	50	ENSMUST00000093271.8	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95721117	95729067	+	95712310	95729067	A5SS	0.09	50	50	ENSMUST00000212799.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95721521	95729067	+	95712310	95729067	A5SS	0.09	50	50	ENSMUST00000212799.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95721627	95729067	+	95712310	95729067	A5SS	0.09	50	50	ENSMUST00000212799.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95722426	95729067	+	95712310	95729067	A5SS	0.09	50	50	ENSMUST00000212799.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95724044	95729067	+	95712310	95729067	A5SS	0.09	50	50	ENSMUST00000212799.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95727610	95729067	+	95712310	95729067	A5SS	0.09	50	50	ENSMUST00000212799.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95721521	95729067	+	95721117	95729067	A5SS	0.09	50	50	ENSMUST00000212141.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95721627	95729067	+	95721117	95729067	A5SS	0.09	50	50	ENSMUST00000212141.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95722426	95729067	+	95721117	95729067	A5SS	0.09	50	50	ENSMUST00000212141.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95724044	95729067	+	95721117	95729067	A5SS	0.09	50	50	ENSMUST00000212141.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95727610	95729067	+	95721117	95729067	A5SS	0.09	50	50	ENSMUST00000212141.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95721627	95729067	+	95721627;95724044	95723929;95729067	ES	0.16	50	50	ENSMUST00000212995.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95721521	95729067	+	95724044	95729067	A5SS&ES	0.16	50	50	ENSMUST00000212995.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95722426	95729067	+	95724044	95729067	A5SS&ES	0.16	50	50	ENSMUST00000212995.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95727610	95729067	+	95724044	95729067	A5SS	0.16	50	50	ENSMUST00000212995.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95721521	95729067	+	95721627	95729067	A5SS	0.09	50	50	ENSMUST00000212956.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95722426	95729067	+	95721627	95729067	A5SS	0.09	50	50	ENSMUST00000212956.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95727610	95729067	+	95721627	95729067	A5SS	0.09	50	50	ENSMUST00000212956.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95722426	95729067	+	95721521	95729067	A5SS	0.09	50	50	ENSMUST00000212531.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95727610	95729067	+	95721521	95729067	A5SS	0.09	50	50	ENSMUST00000212531.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95727610	95729067	+	95722426	95729067	A5SS	0.09	50	50	ENSMUST00000211984.2	ENSMUSG00000031785.17	Adgrg1	chr8	protein_coding	adhesion G protein-coupled receptor G1
chr8	95762572;95762956	95762835;95763069	+	95762572	95763069	cassetteExon	0.5	100	100	ENSMUST00000051259.10	ENSMUSG00000060470.8	Adgrg3	chr8	protein_coding	adhesion G protein-coupled receptor G3
chr8	95766571	95766862	+	95766571	95766888	A3SS	0.5	50	50	ENSMUST00000051259.10	ENSMUSG00000060470.8	Adgrg3	chr8	protein_coding	adhesion G protein-coupled receptor G3
chr8	95747412	95747561	+	95744448	95747561	A5SS	0.5	50	50	ENSMUST00000051259.10	ENSMUSG00000060470.8	Adgrg3	chr8	protein_coding	adhesion G protein-coupled receptor G3
chr8	95816705	95820542	+	95816705;95820244	95820144;95820542	ES	0.5	50	50	ENSMUST00000034239.9	ENSMUSG00000031787.9	Katnb1	chr8	protein_coding	katanin p80 (WD40-containing) subunit B 1
chr8	95832452	95833121	-	95832452	95833091	A5SS	0.5	50	50	ENSMUST00000169353.3	ENSMUSG00000031788.15	Kifc3	chr8	protein_coding	kinesin family member C3
chr8	95864747	95875685	-	95864747	95869060	5pMXE	0.33	50	50	ENSMUST00000034240.15	ENSMUSG00000031788.15	Kifc3	chr8	protein_coding	kinesin family member C3
chr8	95864747	95909261	-	95864747	95869060	5pMXE	0.33	50	50	ENSMUST00000034240.15	ENSMUSG00000031788.15	Kifc3	chr8	protein_coding	kinesin family member C3
chr8	95861487;95864493	95864203;95869060	-	95861487;95864747	95864543;95869060	MXE	0.5	100	100	ENSMUST00000034240.15	ENSMUSG00000031788.15	Kifc3	chr8	protein_coding	kinesin family member C3
chr8	95861487;95864493	95864437;95869060	-	95861487;95864747	95864543;95869060	MXE	0.5	100	100	ENSMUST00000034240.15	ENSMUSG00000031788.15	Kifc3	chr8	protein_coding	kinesin family member C3
chr8	95855962	95861345	-	95837387	95861345	A3SS	0.5	50	50	ENSMUST00000034240.15	ENSMUSG00000031788.15	Kifc3	chr8	protein_coding	kinesin family member C3
chr8	95837387	95839857	-	95837387	95861345	A5SS	0.33	50	50	ENSMUST00000034240.15	ENSMUSG00000031788.15	Kifc3	chr8	protein_coding	kinesin family member C3
chr8	95837387	95853154	-	95837387	95861345	A5SS	0.33	50	50	ENSMUST00000034240.15	ENSMUSG00000031788.15	Kifc3	chr8	protein_coding	kinesin family member C3
chr8	95837387	95839857	-	95837387	95853154	A5SS	0.33	50	50	ENSMUST00000169748.9	ENSMUSG00000031788.15	Kifc3	chr8	protein_coding	kinesin family member C3
chr8	95861487	95864203	-	95861487	95864437	A5SS	0.33	50	50	ENSMUST00000169748.9	ENSMUSG00000031788.15	Kifc3	chr8	protein_coding	kinesin family member C3
chr8	95861487	95864203	-	95861487	95864543	A5SS	0.33	50	50	ENSMUST00000212424.2	ENSMUSG00000031788.15	Kifc3	chr8	protein_coding	kinesin family member C3
chr8	95861487	95864437	-	95861487	95864543	A5SS	0.33	50	50	ENSMUST00000212424.2	ENSMUSG00000031788.15	Kifc3	chr8	protein_coding	kinesin family member C3
chr8	95864747	95875685	-	95864747	95909261	A5SS	0.33	50	50	ENSMUST00000212424.2	ENSMUSG00000031788.15	Kifc3	chr8	protein_coding	kinesin family member C3
chr8	95997593;96002451	96002184;96004384	-	95997593	96004384	cassetteExon	0.5	100	100	ENSMUST00000119870.9	ENSMUSG00000031789.18	Cngb1	chr8	protein_coding	cyclic nucleotide gated channel beta 1
chr8	96017715	96020184	-	96013391	96020184	A3SS	0.5	50	50	ENSMUST00000119870.9	ENSMUSG00000031789.18	Cngb1	chr8	protein_coding	cyclic nucleotide gated channel beta 1
chr8	96026157	96026279	-	96026154	96026279	A3SS	0.5	50	50	ENSMUST00000119870.9	ENSMUSG00000031789.18	Cngb1	chr8	protein_coding	cyclic nucleotide gated channel beta 1
chr8	96004955	96007965	-	96004955	96010796	A5SS	0.33	50	50	ENSMUST00000119870.9	ENSMUSG00000031789.18	Cngb1	chr8	protein_coding	cyclic nucleotide gated channel beta 1
chr8	96004955	96008044	-	96004955	96010796	A5SS	0.33	50	50	ENSMUST00000119870.9	ENSMUSG00000031789.18	Cngb1	chr8	protein_coding	cyclic nucleotide gated channel beta 1
chr8	96020220	96020669	-	96020220	96021748	A5SS	0.5	50	50	ENSMUST00000119870.9	ENSMUSG00000031789.18	Cngb1	chr8	protein_coding	cyclic nucleotide gated channel beta 1
chr8	96004955	96007965	-	96004955	96008044	A5SS	0.33	50	50	ENSMUST00000120044.9	ENSMUSG00000031789.18	Cngb1	chr8	protein_coding	cyclic nucleotide gated channel beta 1
chr8	96037292	96039583	+	96037284	96039583	A5SS	0.33	50	50	ENSMUST00000162555.2	ENSMUSG00000090206.9	Tepp	chr8	protein_coding	testis, prostate and placenta expressed
chr8	96038318	96039583	+	96037284	96039583	A5SS	0.33	50	50	ENSMUST00000162555.2	ENSMUSG00000090206.9	Tepp	chr8	protein_coding	testis, prostate and placenta expressed
chr8	96038318	96039583	+	96037292	96039583	A5SS	0.33	50	50	ENSMUST00000135142.8	ENSMUSG00000090206.9	Tepp	chr8	protein_coding	testis, prostate and placenta expressed
chr8	96038318	96046304	+	96039807	96046304	A5SS&ES	0.5	50	50	ENSMUST00000135142.8	ENSMUSG00000090206.9	Tepp	chr8	protein_coding	testis, prostate and placenta expressed
chr8	96038318	96046304	+	96038318;96039807	96039583;96046304	ES	0.5	50	50	ENSMUST00000161029.9	ENSMUSG00000090206.9	Tepp	chr8	protein_coding	testis, prostate and placenta expressed
chr8	96047566	96052115	+	96047566	96047788	3pMXE	0.5	50	50	ENSMUST00000161029.9	ENSMUSG00000090206.9	Tepp	chr8	protein_coding	testis, prostate and placenta expressed
chr8	96038318	96046304	+	96038318	96039583	A3SS&ES	0.5	50	50	ENSMUST00000212056.2	ENSMUSG00000090206.9	Tepp	chr8	protein_coding	testis, prostate and placenta expressed
chr8	96047342;96047566	96047534;96052115	+	96047342	96052115	cassetteExon	0.5	100	100	ENSMUST00000153991.2	ENSMUSG00000090206.9	Tepp	chr8	protein_coding	testis, prostate and placenta expressed
chr8	96059074	96059996	+	96059093	96059996	A5SS	0.33	50	50	ENSMUST00000034245.16	ENSMUSG00000031792.16	Usb1	chr8	protein_coding	U6 snRNA biogenesis 1
chr8	96059910	96059996	+	96059093	96059996	A5SS	0.33	50	50	ENSMUST00000034245.16	ENSMUSG00000031792.16	Usb1	chr8	protein_coding	U6 snRNA biogenesis 1
chr8	96059910	96059996	+	96059074	96059996	A5SS	0.33	50	50	ENSMUST00000213059.2	ENSMUSG00000031792.16	Usb1	chr8	protein_coding	U6 snRNA biogenesis 1
chr8	96149522	96161116	-	96151324	96161116	A3SS	0.5	50	50	ENSMUST00000212731.2	ENSMUSG00000031796.8	Cfap20	chr8	protein_coding	cilia and flagella associated protein 20
chr8	96151324	96151810	-	96151324	96161116	A5SS	0.5	50	50	ENSMUST00000212731.2	ENSMUSG00000031796.8	Cfap20	chr8	protein_coding	cilia and flagella associated protein 20
chr8	96149522	96161116	-	96149522;96151324	96151245;96161116	ES	0.5	50	50	ENSMUST00000034249.8	ENSMUSG00000031796.8	Cfap20	chr8	protein_coding	cilia and flagella associated protein 20
chr8	96149522;96150583	96150335;96151245	-	96149522	96151245	cassetteExon	0.5	100	100	ENSMUST00000034249.8	ENSMUSG00000031796.8	Cfap20	chr8	protein_coding	cilia and flagella associated protein 20
chr8	96149522	96150335	-	96149522	96161116	A5SS	0.33	50	50	ENSMUST00000212684.2	ENSMUSG00000031796.8	Cfap20	chr8	protein_coding	cilia and flagella associated protein 20
chr8	96149522	96161116	-	96149522	96151245	5pMXE	0.33	50	50	ENSMUST00000212807.2	ENSMUSG00000031796.8	Cfap20	chr8	protein_coding	cilia and flagella associated protein 20
chr8	96184116	96187306	-	96184116;96186801	96186700;96187306	ES	0.5	50	50	ENSMUST00000056919.9	ENSMUSG00000046707.10	Csnk2a2	chr8	protein_coding	casein kinase 2, alpha prime polypeptide
chr8	96187416	96192279	-	96187416;96188257	96188174;96192279	ES	0.5	50	50	ENSMUST00000056919.9	ENSMUSG00000046707.10	Csnk2a2	chr8	protein_coding	casein kinase 2, alpha prime polypeptide
chr8	96188257	96199999	-	96188257;96192338	96192279;96199999	ES	0.5	50	50	ENSMUST00000056919.9	ENSMUSG00000046707.10	Csnk2a2	chr8	protein_coding	casein kinase 2, alpha prime polypeptide
chr8	96214304	96216585	-	96214304	96214972	5pMXE	0.25	50	50	ENSMUST00000056919.9	ENSMUSG00000046707.10	Csnk2a2	chr8	protein_coding	casein kinase 2, alpha prime polypeptide
chr8	96214304	96214830	-	96214304	96214972	A5SS	0.25	50	50	ENSMUST00000056919.9	ENSMUSG00000046707.10	Csnk2a2	chr8	protein_coding	casein kinase 2, alpha prime polypeptide
chr8	96214304	96215031	-	96214304	96214972	A5SS	0.25	50	50	ENSMUST00000056919.9	ENSMUSG00000046707.10	Csnk2a2	chr8	protein_coding	casein kinase 2, alpha prime polypeptide
chr8	96203941	96214193	-	96192338	96214193	A3SS	0.5	50	50	ENSMUST00000212616.2	ENSMUSG00000046707.10	Csnk2a2	chr8	protein_coding	casein kinase 2, alpha prime polypeptide
chr8	96188257	96199999	-	96188257	96192279	A5SS&ES	0.5	50	50	ENSMUST00000212616.2	ENSMUSG00000046707.10	Csnk2a2	chr8	protein_coding	casein kinase 2, alpha prime polypeptide
chr8	96192338	96199999	-	96192338	96214193	A5SS	0.5	50	50	ENSMUST00000212616.2	ENSMUSG00000046707.10	Csnk2a2	chr8	protein_coding	casein kinase 2, alpha prime polypeptide
chr8	96187416;96188257	96188174;96199999	-	96187416;96192338	96192279;96199999	MXE	0.5	100	100	ENSMUST00000212952.2	ENSMUSG00000046707.10	Csnk2a2	chr8	protein_coding	casein kinase 2, alpha prime polypeptide
chr8	96214304	96216585	-	96214304	96215031	5pMXE	0.25	50	50	ENSMUST00000212441.2	ENSMUSG00000046707.10	Csnk2a2	chr8	protein_coding	casein kinase 2, alpha prime polypeptide
chr8	96214304	96214830	-	96214304	96215031	A5SS	0.25	50	50	ENSMUST00000212441.2	ENSMUSG00000046707.10	Csnk2a2	chr8	protein_coding	casein kinase 2, alpha prime polypeptide
chr8	96214304	96216585	-	96214304	96214830	5pMXE	0.25	50	50	ENSMUST00000211980.2	ENSMUSG00000046707.10	Csnk2a2	chr8	protein_coding	casein kinase 2, alpha prime polypeptide
chr8	96188257;96192338	96192279;96214193	-	96188257;96203941	96199999;96214193	MXE	0.5	100	100	ENSMUST00000211980.2	ENSMUSG00000046707.10	Csnk2a2	chr8	protein_coding	casein kinase 2, alpha prime polypeptide
chr8	96187416	96192279	-	96188257	96192279	3pMXE	0.5	50	50	ENSMUST00000212615.2	ENSMUSG00000046707.10	Csnk2a2	chr8	protein_coding	casein kinase 2, alpha prime polypeptide
chr8	96225484	96226943	+	96225484;96225908	96225842;96226943	ES	0.5	50	50	ENSMUST00000212602.2	ENSMUSG00000110427.2	4933406B17Rik	chr8	lncRNA	RIKEN cDNA 4933406B17 gene
chr8	96292340	96297632	-	96292337	96297632	A3SS	0.5	50	50	ENSMUST00000212513.2	ENSMUSG00000048400.14	Prss54	chr8	protein_coding	protease, serine 54
chr8	96286450	96290978	-	96286450	96291984	A5SS	0.5	50	50	ENSMUST00000212513.2	ENSMUSG00000048400.14	Prss54	chr8	protein_coding	protease, serine 54
chr8	96302235	96302735	-	96302235	96302899	A5SS	0.5	50	50	ENSMUST00000212513.2	ENSMUSG00000048400.14	Prss54	chr8	protein_coding	protease, serine 54
chr8	96320381	96328453	+	96320381;96327263	96327034;96328453	ES	0.33	50	50	ENSMUST00000211925.2	ENSMUSG00000110447.2	Gm31518	chr8	lncRNA	predicted gene, 31518
chr8	96328376	96328453	+	96327263	96328453	A5SS	0.33	50	50	ENSMUST00000211925.2	ENSMUSG00000110447.2	Gm31518	chr8	lncRNA	predicted gene, 31518
chr8	96328376	96328453	+	96320381	96328453	A5SS	0.33	50	50	ENSMUST00000212011.2	ENSMUSG00000110447.2	Gm31518	chr8	lncRNA	predicted gene, 31518
chr8	96328599	96337881	+	96328599	96346084	A3SS	0.5	50	50	ENSMUST00000213069.2	ENSMUSG00000110447.2	Gm31518	chr8	lncRNA	predicted gene, 31518
chr8	96426785	96432790	+	96426785	96432816	A3SS	0.5	50	50	ENSMUST00000160964.8	ENSMUSG00000036564.18	Ndrg4	chr8	protein_coding	N-myc downstream regulated gene 4
chr8	96405011	96423822	+	96404499	96423822	A5SS	0.5	50	50	ENSMUST00000160964.8	ENSMUSG00000036564.18	Ndrg4	chr8	protein_coding	N-myc downstream regulated gene 4
chr8	96429805	96432816	+	96426785	96432816	A5SS	0.5	50	50	ENSMUST00000160964.8	ENSMUSG00000036564.18	Ndrg4	chr8	protein_coding	N-myc downstream regulated gene 4
chr8	96436582	96437562	+	96436582;96437339	96437292;96437562	ES	0.5	50	50	ENSMUST00000041318.14	ENSMUSG00000036564.18	Ndrg4	chr8	protein_coding	N-myc downstream regulated gene 4
chr8	96437772	96439806	+	96437772;96438991	96438953;96439806	ES	0.5	50	50	ENSMUST00000041318.14	ENSMUSG00000036564.18	Ndrg4	chr8	protein_coding	N-myc downstream regulated gene 4
chr8	96436582	96437274	+	96436582	96437292	A3SS	0.33	50	50	ENSMUST00000041318.14	ENSMUSG00000036564.18	Ndrg4	chr8	protein_coding	N-myc downstream regulated gene 4
chr8	96433617;96435461	96435236;96435711	+	96433617	96435711	cassetteExon	0.5	100	100	ENSMUST00000212160.2	ENSMUSG00000036564.18	Ndrg4	chr8	protein_coding	N-myc downstream regulated gene 4
chr8	96436582	96437562	+	96436582;96437339	96437274;96437562	ES	0.5	50	50	ENSMUST00000160915.8	ENSMUSG00000036564.18	Ndrg4	chr8	protein_coding	N-myc downstream regulated gene 4
chr8	96436582	96437562	+	96437339	96437562	5pMXE	0.5	50	50	ENSMUST00000159632.2	ENSMUSG00000036564.18	Ndrg4	chr8	protein_coding	N-myc downstream regulated gene 4
chr8	96437772	96439806	+	96438991	96439806	5pMXE	0.5	50	50	ENSMUST00000161314.2	ENSMUSG00000036564.18	Ndrg4	chr8	protein_coding	N-myc downstream regulated gene 4
chr8	96442591	96443235	+	96443122	96443235	A5SS&ES	0.5	50	50	ENSMUST00000034096.6	ENSMUSG00000031671.12	Setd6	chr8	protein_coding	SET domain containing 6
chr8	96443606	96444549	+	96443669	96444549	A5SS	0.33	50	50	ENSMUST00000034096.6	ENSMUSG00000031671.12	Setd6	chr8	protein_coding	SET domain containing 6
chr8	96443690	96444549	+	96443669	96444549	A5SS	0.33	50	50	ENSMUST00000034096.6	ENSMUSG00000031671.12	Setd6	chr8	protein_coding	SET domain containing 6
chr8	96443429	96444821	+	96443429	96443549	3pMXE	0.5	50	50	ENSMUST00000126888.2	ENSMUSG00000031671.12	Setd6	chr8	protein_coding	SET domain containing 6
chr8	96444729	96444821	+	96443429	96444821	A5SS	0.5	50	50	ENSMUST00000141900.8	ENSMUSG00000031671.12	Setd6	chr8	protein_coding	SET domain containing 6
chr8	96443690	96444549	+	96443606	96444549	A5SS	0.33	50	50	ENSMUST00000148727.3	ENSMUSG00000031671.12	Setd6	chr8	protein_coding	SET domain containing 6
chr8	96447113	96448134	-	96447113;96447405	96447271;96448134	ES	0.5	50	50	ENSMUST00000098473.11	ENSMUSG00000036550.17	Cnot1	chr8	protein_coding	CCR4-NOT transcription complex, subunit 1
chr8	96460776	96462314	-	96460776;96460977	96460869;96462314	ES	0.5	50	50	ENSMUST00000098473.11	ENSMUSG00000036550.17	Cnot1	chr8	protein_coding	CCR4-NOT transcription complex, subunit 1
chr8	96463021	96466436	-	96463073	96466436	A3SS	0.5	50	50	ENSMUST00000098473.11	ENSMUSG00000036550.17	Cnot1	chr8	protein_coding	CCR4-NOT transcription complex, subunit 1
chr8	96481736	96482720	-	96481739	96482720	A3SS	0.5	50	50	ENSMUST00000098473.11	ENSMUSG00000036550.17	Cnot1	chr8	protein_coding	CCR4-NOT transcription complex, subunit 1
chr8	96501350	96501907	-	96501356	96501907	A3SS	0.5	50	50	ENSMUST00000098473.11	ENSMUSG00000036550.17	Cnot1	chr8	protein_coding	CCR4-NOT transcription complex, subunit 1
chr8	96457289	96459699	-	96457289	96459720	A5SS	0.5	50	50	ENSMUST00000098473.11	ENSMUSG00000036550.17	Cnot1	chr8	protein_coding	CCR4-NOT transcription complex, subunit 1
chr8	96479778	96481608	-	96479778	96481593	A5SS	0.5	50	50	ENSMUST00000098473.11	ENSMUSG00000036550.17	Cnot1	chr8	protein_coding	CCR4-NOT transcription complex, subunit 1
chr8	96460776	96462314	-	96460977	96462314	3pMXE	0.5	50	50	ENSMUST00000212712.2	ENSMUSG00000036550.17	Cnot1	chr8	protein_coding	CCR4-NOT transcription complex, subunit 1
chr8	96502014	96515258	-	96475027	96515258	A3SS	0.5	50	50	ENSMUST00000213046.2	ENSMUSG00000036550.17	Cnot1	chr8	protein_coding	CCR4-NOT transcription complex, subunit 1
chr8	96475027	96475472	-	96475027	96515258	A5SS	0.5	50	50	ENSMUST00000213046.2	ENSMUSG00000036550.17	Cnot1	chr8	protein_coding	CCR4-NOT transcription complex, subunit 1
chr8	96536925	96548051	+	96536925;96543074	96542996;96548051	ES	0.5	50	50	ENSMUST00000145562.8	ENSMUSG00000074136.10	4930513N10Rik	chr8	lncRNA	RIKEN cDNA 4930513N10 gene
chr8	96539128	96544707	-	96539128	96544254	5pMXE	0.5	50	50	ENSMUST00000212289.2	ENSMUSG00000110489.2	Gm31659	chr8	lncRNA	predicted gene, 31659
chr8	96535387	96539089	-	96535387	96539052	A5SS	0.5	50	50	ENSMUST00000212289.2	ENSMUSG00000110489.2	Gm31659	chr8	lncRNA	predicted gene, 31659
chr8	96575396	96580114	-	96575396	96579430	A5SS&ES	0.5	50	50	ENSMUST00000040481.4	ENSMUSG00000036534.7	Slc38a7	chr8	protein_coding	solute carrier family 38, member 7
chr8	96579535	96580114	-	96579535	96580100	A5SS	0.5	50	50	ENSMUST00000040481.4	ENSMUSG00000036534.7	Slc38a7	chr8	protein_coding	solute carrier family 38, member 7
chr8	96575396	96580114	-	96575396;96579535	96579430;96580114	ES	0.5	50	50	ENSMUST00000212270.2	ENSMUSG00000036534.7	Slc38a7	chr8	protein_coding	solute carrier family 38, member 7
chr8	97240005	97240144	+	97239329	97240144	A5SS	0.5	50	50	ENSMUST00000212030.2	ENSMUSG00000110717.2	1700047G07Rik	chr8	lncRNA	RIKEN cDNA 1700047G07 gene
chr8	97942723	97945270	+	97942723;97945155	97945024;97945270	ES	0.5	50	50	ENSMUST00000212210.2	ENSMUSG00000110552.2	Gm45788	chr8	lncRNA	predicted gene 45788
chr8	99825579	99897898	-	99825579;99838424	99838303;99897898	ES	0.5	50	50	ENSMUST00000155527.8	ENSMUSG00000036510.18	Cdh8	chr8	protein_coding	cadherin 8
chr8	99950581	99957035	-	99927032	99957035	A3SS	0.5	50	50	ENSMUST00000155527.8	ENSMUSG00000036510.18	Cdh8	chr8	protein_coding	cadherin 8
chr8	99751589	99757508	-	99751589	99757471	A5SS	0.5	50	50	ENSMUST00000155527.8	ENSMUSG00000036510.18	Cdh8	chr8	protein_coding	cadherin 8
chr8	99756543	99757508	-	99751589	99757508	A3SS	0.5	50	50	ENSMUST00000142129.8	ENSMUSG00000036510.18	Cdh8	chr8	protein_coding	cadherin 8
chr8	100143409	100146411	+	100143409	100403179	A3SS	0.5	50	50	ENSMUST00000153366.2	ENSMUSG00000052479.6	A330008L17Rik	chr8	lncRNA	RIKEN cDNA A330008L17 gene
chr8	104330514	104361820	+	104330514	104350193	3pMXE	0.5	50	50	ENSMUST00000209714.2	ENSMUSG00000110336.2	4933400L20Rik	chr8	lncRNA	RIKEN cDNA 4933400L20 gene
chr8	104838146	104839512	+	104828364	104839512	A5SS	0.5	50	50	ENSMUST00000034339.10	ENSMUSG00000031871.10	Cdh5	chr8	protein_coding	cadherin 5
chr8	104937801	104941646	+	104937801;104940658	104940548;104941646	ES	0.5	50	50	ENSMUST00000164076.3	ENSMUSG00000031872.15	Bean1	chr8	protein_coding	brain expressed, associated with Nedd4, 1
chr8	104897636;104908751	104908275;104937550	+	104897636	104937550	cassetteExon	0.5	100	100	ENSMUST00000164076.3	ENSMUSG00000031872.15	Bean1	chr8	protein_coding	brain expressed, associated with Nedd4, 1
chr8	104897636;104908751	104908643;104937550	+	104897636	104937550	cassetteExon	0.5	100	100	ENSMUST00000164076.3	ENSMUSG00000031872.15	Bean1	chr8	protein_coding	brain expressed, associated with Nedd4, 1
chr8	104897636	104908643	+	104897636;104908380	104908275;104908643	ES	0.5	50	50	ENSMUST00000171018.8	ENSMUSG00000031872.15	Bean1	chr8	protein_coding	brain expressed, associated with Nedd4, 1
chr8	104897643	104908275	+	104897636	104908275	A5SS	0.5	50	50	ENSMUST00000171018.8	ENSMUSG00000031872.15	Bean1	chr8	protein_coding	brain expressed, associated with Nedd4, 1
chr8	104897636	104908643	+	104908380	104908643	A5SS&ES	0.5	50	50	ENSMUST00000212979.2	ENSMUSG00000031872.15	Bean1	chr8	protein_coding	brain expressed, associated with Nedd4, 1
chr8	104897636	104937550	+	104908751	104937550	A5SS&ES	0.5	50	50	ENSMUST00000212979.2	ENSMUSG00000031872.15	Bean1	chr8	protein_coding	brain expressed, associated with Nedd4, 1
chr8	104957880	104965376	-	104957880;104963477	104963404;104965376	ES	0.5	50	50	ENSMUST00000050211.7	ENSMUSG00000035824.8	Tk2	chr8	protein_coding	thymidine kinase 2, mitochondrial
chr8	104970091	104975033	-	104970091;104974316	104974279;104975033	ES	0.5	50	50	ENSMUST00000050211.7	ENSMUSG00000035824.8	Tk2	chr8	protein_coding	thymidine kinase 2, mitochondrial
chr8	104965607	104967748	-	104965465	104967748	A3SS	0.5	50	50	ENSMUST00000050211.7	ENSMUSG00000035824.8	Tk2	chr8	protein_coding	thymidine kinase 2, mitochondrial
chr8	104974316	104974658	-	104974316	104975033	A5SS	0.5	50	50	ENSMUST00000050211.7	ENSMUSG00000035824.8	Tk2	chr8	protein_coding	thymidine kinase 2, mitochondrial
chr8	104970091	104975033	-	104970091	104974279	A5SS&ES	0.5	50	50	ENSMUST00000212854.2	ENSMUSG00000035824.8	Tk2	chr8	protein_coding	thymidine kinase 2, mitochondrial
chr8	104984075	104989903	+	104984075;104988201	104988106;104989903	ES	0.33	50	50	ENSMUST00000034342.13	ENSMUSG00000054400.17	Cklf	chr8	protein_coding	chemokine-like factor
chr8	104988201;104988913	104988800;104989903	+	104988201	104989903	cassetteExon	0.5	100	100	ENSMUST00000034342.13	ENSMUSG00000054400.17	Cklf	chr8	protein_coding	chemokine-like factor
chr8	104984075	104984703	+	104984075	104988106	A3SS	0.33	50	50	ENSMUST00000034342.13	ENSMUSG00000054400.17	Cklf	chr8	protein_coding	chemokine-like factor
chr8	104985303	104988106	+	104984075	104988106	A5SS	0.5	50	50	ENSMUST00000034342.13	ENSMUSG00000054400.17	Cklf	chr8	protein_coding	chemokine-like factor
chr8	104984075	104990092	+	104984075	104989903	3pMXE	0.25	50	50	ENSMUST00000211809.2	ENSMUSG00000054400.17	Cklf	chr8	protein_coding	chemokine-like factor
chr8	104984075	104984703	+	104984075	104989903	A3SS	0.25	50	50	ENSMUST00000211809.2	ENSMUSG00000054400.17	Cklf	chr8	protein_coding	chemokine-like factor
chr8	104988913	104989903	+	104984075	104989903	A5SS	0.33	50	50	ENSMUST00000211809.2	ENSMUSG00000054400.17	Cklf	chr8	protein_coding	chemokine-like factor
chr8	104984075	104984703	+	104984075	104990092	A3SS	0.25	50	50	ENSMUST00000098464.6	ENSMUSG00000054400.17	Cklf	chr8	protein_coding	chemokine-like factor
chr8	104984075	104988106	+	104984075	104990092	A3SS	0.25	50	50	ENSMUST00000098464.6	ENSMUSG00000054400.17	Cklf	chr8	protein_coding	chemokine-like factor
chr8	104988201	104989903	+	104988913	104989903	5pMXE	0.33	50	50	ENSMUST00000212259.2	ENSMUSG00000054400.17	Cklf	chr8	protein_coding	chemokine-like factor
chr8	105019428	105020154	-	105019428	105019530	5pMXE	0.5	50	50	ENSMUST00000034344.10	ENSMUSG00000074127.7	Cmtm2a	chr8	protein_coding	CKLF-like MARVEL transmembrane domain containing 2A
chr8	105017932	105019270	-	105010579	105019270	A3SS	0.33	50	50	ENSMUST00000034344.10	ENSMUSG00000074127.7	Cmtm2a	chr8	protein_coding	CKLF-like MARVEL transmembrane domain containing 2A
chr8	105010579	105019270	-	105008129	105019270	A3SS	0.33	50	50	ENSMUST00000212492.2	ENSMUSG00000074127.7	Cmtm2a	chr8	protein_coding	CKLF-like MARVEL transmembrane domain containing 2A
chr8	105017932	105019270	-	105008129	105019270	A3SS	0.33	50	50	ENSMUST00000212492.2	ENSMUSG00000074127.7	Cmtm2a	chr8	protein_coding	CKLF-like MARVEL transmembrane domain containing 2A
chr8	105008129	105009806	-	105008129	105019270	A5SS	0.5	50	50	ENSMUST00000212492.2	ENSMUSG00000074127.7	Cmtm2a	chr8	protein_coding	CKLF-like MARVEL transmembrane domain containing 2A
chr8	105031862	105036112	-	105031862	105035848	A5SS	0.5	50	50	ENSMUST00000162616.8	ENSMUSG00000031876.19	Gm45711	chr8	protein_coding	predicted gene 45711
chr8	105049399	105057047	+	105049399;105056497	105056396;105057047	ES	0.5	50	50	ENSMUST00000041973.7	ENSMUSG00000035785.7	Cmtm2b	chr8	protein_coding	CKLF-like MARVEL transmembrane domain containing 2B
chr8	105066991	105067312	+	105066119	105067312	A5SS	0.25	50	50	ENSMUST00000212139.2	ENSMUSG00000031875.8	Cmtm3	chr8	protein_coding	CKLF-like MARVEL transmembrane domain containing 3
chr8	105067143	105067312	+	105066119	105067312	A5SS	0.25	50	50	ENSMUST00000212139.2	ENSMUSG00000031875.8	Cmtm3	chr8	protein_coding	CKLF-like MARVEL transmembrane domain containing 3
chr8	105067185	105067312	+	105066119	105067312	A5SS	0.25	50	50	ENSMUST00000212139.2	ENSMUSG00000031875.8	Cmtm3	chr8	protein_coding	CKLF-like MARVEL transmembrane domain containing 3
chr8	105067143	105067312	+	105066991	105067312	A5SS	0.25	50	50	ENSMUST00000212081.2	ENSMUSG00000031875.8	Cmtm3	chr8	protein_coding	CKLF-like MARVEL transmembrane domain containing 3
chr8	105067185	105067312	+	105066991	105067312	A5SS	0.25	50	50	ENSMUST00000212081.2	ENSMUSG00000031875.8	Cmtm3	chr8	protein_coding	CKLF-like MARVEL transmembrane domain containing 3
chr8	105067185	105067312	+	105067143	105067312	A5SS	0.25	50	50	ENSMUST00000211885.2	ENSMUSG00000031875.8	Cmtm3	chr8	protein_coding	CKLF-like MARVEL transmembrane domain containing 3
chr8	105149862	105152071	-	105149862;105150259	105150218;105152071	ES	0.5	50	50	ENSMUST00000041769.8	ENSMUSG00000035770.9	Dync1li2	chr8	protein_coding	dynein, cytoplasmic 1 light intermediate chain 2
chr8	105147314;105148035	105147917;105148919	-	105147314	105148919	cassetteExon	0.5	100	100	ENSMUST00000041769.8	ENSMUSG00000035770.9	Dync1li2	chr8	protein_coding	dynein, cytoplasmic 1 light intermediate chain 2
chr8	105167222;105167486	105167333;105169106	-	105167222	105169106	cassetteExon	0.5	100	100	ENSMUST00000041769.8	ENSMUSG00000035770.9	Dync1li2	chr8	protein_coding	dynein, cytoplasmic 1 light intermediate chain 2
chr8	105147306	105148919	-	105147314	105148919	A3SS	0.33	50	50	ENSMUST00000041769.8	ENSMUSG00000035770.9	Dync1li2	chr8	protein_coding	dynein, cytoplasmic 1 light intermediate chain 2
chr8	105167222	105167936	-	105167222	105169106	A5SS	0.33	50	50	ENSMUST00000041769.8	ENSMUSG00000035770.9	Dync1li2	chr8	protein_coding	dynein, cytoplasmic 1 light intermediate chain 2
chr8	105148035	105148919	-	105147306	105148919	A3SS	0.33	50	50	ENSMUST00000212343.2	ENSMUSG00000035770.9	Dync1li2	chr8	protein_coding	dynein, cytoplasmic 1 light intermediate chain 2
chr8	105167222	105167333	-	105167222	105167936	A5SS	0.33	50	50	ENSMUST00000212678.2	ENSMUSG00000035770.9	Dync1li2	chr8	protein_coding	dynein, cytoplasmic 1 light intermediate chain 2
chr8	105179406;105192077	105191914;105195360	-	105179406	105195360	cassetteExon	0.5	100	100	ENSMUST00000064576.8	ENSMUSG00000052616.11	Terb1	chr8	protein_coding	telomere repeat binding bouquet formation protein 1
chr8	105212120	105215119	-	105212123	105215119	A3SS	0.5	50	50	ENSMUST00000064576.8	ENSMUSG00000052616.11	Terb1	chr8	protein_coding	telomere repeat binding bouquet formation protein 1
chr8	105178492	105179233	-	105178492	105179257	A5SS	0.5	50	50	ENSMUST00000064576.8	ENSMUSG00000052616.11	Terb1	chr8	protein_coding	telomere repeat binding bouquet formation protein 1
chr8	105224727	105225165	-	105224727	105225125	A5SS	0.5	50	50	ENSMUST00000064576.8	ENSMUSG00000052616.11	Terb1	chr8	protein_coding	telomere repeat binding bouquet formation protein 1
chr8	105234478	105235998	-	105234478	105235899	A5SS	0.5	50	50	ENSMUST00000064576.8	ENSMUSG00000052616.11	Terb1	chr8	protein_coding	telomere repeat binding bouquet formation protein 1
chr8	105211034	105211989	-	105199670	105211989	A3SS	0.5	50	50	ENSMUST00000161520.8	ENSMUSG00000052616.11	Terb1	chr8	protein_coding	telomere repeat binding bouquet formation protein 1
chr8	105199670	105208805	-	105199670	105211989	A5SS	0.5	50	50	ENSMUST00000161520.8	ENSMUSG00000052616.11	Terb1	chr8	protein_coding	telomere repeat binding bouquet formation protein 1
chr8	105244895;105246455	105246177;105249279	-	105244895;105246613	105246485;105249279	MXE	0.5	100	100	ENSMUST00000161462.8	ENSMUSG00000031878.19	Nae1	chr8	protein_coding	NEDD8 activating enzyme E1 subunit 1
chr8	105253794;105254081	105254010;105254819	-	105253794	105254819	cassetteExon	0.5	100	100	ENSMUST00000162466.8	ENSMUSG00000031878.19	Nae1	chr8	protein_coding	NEDD8 activating enzyme E1 subunit 1
chr8	105237899;105240087	105239832;105242761	-	105237899	105242761	cassetteExon	0.5	100	100	ENSMUST00000161411.8	ENSMUSG00000031878.19	Nae1	chr8	protein_coding	NEDD8 activating enzyme E1 subunit 1
chr8	105246613	105249279	-	105246455	105249279	A3SS	0.5	50	50	ENSMUST00000160913.8	ENSMUSG00000031878.19	Nae1	chr8	protein_coding	NEDD8 activating enzyme E1 subunit 1
chr8	105253794	105254819	-	105253794	105254010	A5SS	0.5	50	50	ENSMUST00000159393.9	ENSMUSG00000031878.19	Nae1	chr8	protein_coding	NEDD8 activating enzyme E1 subunit 1
chr8	105267557	105270042	+	105261855	105270042	A5SS	0.33	50	50	ENSMUST00000159416.8	ENSMUSG00000031883.14	Car7	chr8	protein_coding	carbonic anhydrase 7
chr8	105268032	105270042	+	105261855	105270042	A5SS	0.33	50	50	ENSMUST00000159416.8	ENSMUSG00000031883.14	Car7	chr8	protein_coding	carbonic anhydrase 7
chr8	105268032	105270042	+	105267557	105270042	A5SS	0.33	50	50	ENSMUST00000056051.11	ENSMUSG00000031883.14	Car7	chr8	protein_coding	carbonic anhydrase 7
chr8	105282517	105282644	-	105281228	105282644	A3SS	0.5	50	50	ENSMUST00000212567.2	ENSMUSG00000110607.2	Gm45843	chr8	lncRNA	predicted gene 45843
chr8	105328860	105341766	-	105328860	105339629	5pMXE	0.5	50	50	ENSMUST00000212318.2	ENSMUSG00000031881.7	Cdh16	chr8	protein_coding	cadherin 16
chr8	105346703	105348597	-	105346703;105348285	105348127;105348597	ES	0.5	50	50	ENSMUST00000212882.2	ENSMUSG00000031881.7	Cdh16	chr8	protein_coding	cadherin 16
chr8	105348960	105350013	-	105348960;105349769	105349680;105350013	ES	0.33	50	50	ENSMUST00000212882.2	ENSMUSG00000031881.7	Cdh16	chr8	protein_coding	cadherin 16
chr8	105340981	105344257	-	105343698	105344257	A3SS&ES	0.33	50	50	ENSMUST00000212882.2	ENSMUSG00000031881.7	Cdh16	chr8	protein_coding	cadherin 16
chr8	105341070	105341766	-	105328860	105341766	A3SS	0.25	50	50	ENSMUST00000212882.2	ENSMUSG00000031881.7	Cdh16	chr8	protein_coding	cadherin 16
chr8	105341113	105341766	-	105328860	105341766	A3SS	0.25	50	50	ENSMUST00000212882.2	ENSMUSG00000031881.7	Cdh16	chr8	protein_coding	cadherin 16
chr8	105341139	105341766	-	105328860	105341766	A3SS	0.25	50	50	ENSMUST00000212882.2	ENSMUSG00000031881.7	Cdh16	chr8	protein_coding	cadherin 16
chr8	105344401	105348805	-	105348735	105348805	A3SS&ES	0.5	50	50	ENSMUST00000212882.2	ENSMUSG00000031881.7	Cdh16	chr8	protein_coding	cadherin 16
chr8	105348986	105350013	-	105349769	105350013	A3SS&ES	0.33	50	50	ENSMUST00000212882.2	ENSMUSG00000031881.7	Cdh16	chr8	protein_coding	cadherin 16
chr8	105350070	105350452	-	105350070	105350780	A5SS	0.5	50	50	ENSMUST00000212882.2	ENSMUSG00000031881.7	Cdh16	chr8	protein_coding	cadherin 16
chr8	105341070	105341766	-	105341113	105341766	A3SS	0.25	50	50	ENSMUST00000211903.2	ENSMUSG00000031881.7	Cdh16	chr8	protein_coding	cadherin 16
chr8	105341139	105341766	-	105341113	105341766	A3SS	0.25	50	50	ENSMUST00000211903.2	ENSMUSG00000031881.7	Cdh16	chr8	protein_coding	cadherin 16
chr8	105341113	105341839	-	105341113	105341766	A5SS	0.5	50	50	ENSMUST00000211903.2	ENSMUSG00000031881.7	Cdh16	chr8	protein_coding	cadherin 16
chr8	105348986	105350013	-	105348960	105350013	A3SS	0.33	50	50	ENSMUST00000163783.4	ENSMUSG00000031881.7	Cdh16	chr8	protein_coding	cadherin 16
chr8	105340981	105344257	-	105341882	105344257	A3SS&ES	0.33	50	50	ENSMUST00000213033.2	ENSMUSG00000031881.7	Cdh16	chr8	protein_coding	cadherin 16
chr8	105343698	105344257	-	105341882	105344257	A3SS	0.33	50	50	ENSMUST00000213033.2	ENSMUSG00000031881.7	Cdh16	chr8	protein_coding	cadherin 16
chr8	105341882	105342644	-	105341882	105344257	A5SS	0.5	50	50	ENSMUST00000213033.2	ENSMUSG00000031881.7	Cdh16	chr8	protein_coding	cadherin 16
chr8	105341139	105341766	-	105341070	105341766	A3SS	0.25	50	50	ENSMUST00000211889.2	ENSMUSG00000031881.7	Cdh16	chr8	protein_coding	cadherin 16
chr8	105346703	105348597	-	105348285	105348597	3pMXE	0.5	50	50	ENSMUST00000212662.2	ENSMUSG00000031881.7	Cdh16	chr8	protein_coding	cadherin 16
chr8	105357560	105357755	-	105357612	105357755	A3SS	0.5	50	50	ENSMUST00000034351.8	ENSMUSG00000031880.8	Rrad	chr8	protein_coding	Ras-related associated with diabetes
chr8	105358415	105361131	+	105360350	105361131	A5SS&ES	0.5	50	50	ENSMUST00000212450.2	ENSMUSG00000110652.2	Gm33023	chr8	lncRNA	predicted gene, 33023
chr8	105367720	105367943	-	105367725	105367943	A3SS	0.5	50	50	ENSMUST00000164884.9	ENSMUSG00000031879.15	Ciao2b	chr8	protein_coding	cytosolic iron-sulfur assembly component 2B
chr8	105380949	105383913	+	105368515	105383913	A5SS	0.5	50	50	ENSMUST00000171130.9	ENSMUSG00000023737.15	1700082M22Rik	chr8	lncRNA	RIKEN cDNA 1700082M22 gene
chr8	105403374	105403763	-	105403371	105403763	A3SS	0.5	50	50	ENSMUST00000212442.2	ENSMUSG00000110568.2	Gm7208	chr8	transcribed_unprocessed_pseudogene	predicted gene 7208
chr8	105404540	105404819	-	105404537	105404819	A3SS	0.5	50	50	ENSMUST00000212442.2	ENSMUSG00000110568.2	Gm7208	chr8	transcribed_unprocessed_pseudogene	predicted gene 7208
chr8	105432910	105433780	-	105432910;105433132	105432999;105433780	ES	0.5	50	50	ENSMUST00000212733.3	ENSMUSG00000110557.3	Gm5159	chr8	transcribed_unprocessed_pseudogene	predicted gene 5159
chr8	105464182	105465662	+	105464182;105465384	105465286;105465662	ES	0.5	50	50	ENSMUST00000034346.15	ENSMUSG00000055730.17	Ces2a	chr8	protein_coding	carboxylesterase 2A
chr8	105463843	105464100	+	105463843	105463924	A3SS	0.5	50	50	ENSMUST00000034346.15	ENSMUSG00000055730.17	Ces2a	chr8	protein_coding	carboxylesterase 2A
chr8	105558379	105559217	+	105558379	105559212	A3SS	0.5	50	50	ENSMUST00000059449.7	ENSMUSG00000050097.7	Ces2b	chr8	protein_coding	carboxyesterase 2B
chr8	105676736;105677818	105677345;105678587	+	105676736	105678587	cassetteExon	0.5	100	100	ENSMUST00000212926.2	ENSMUSG00000062826.8	Ces2f	chr8	protein_coding	carboxylesterase 2F
chr8	105777247	105778364	+	105777247;105778253	105778100;105778364	ES	0.5	50	50	ENSMUST00000093222.13	ENSMUSG00000069922.13	Ces3a	chr8	protein_coding	carboxylesterase 3A
chr8	105780080	105782211	+	105780080;105780316	105780176;105782211	ES	0.5	50	50	ENSMUST00000093222.13	ENSMUSG00000069922.13	Ces3a	chr8	protein_coding	carboxylesterase 3A
chr8	105783163	105783271	+	105783163	105784093	A3SS	0.5	50	50	ENSMUST00000093222.13	ENSMUSG00000069922.13	Ces3a	chr8	protein_coding	carboxylesterase 3A
chr8	105777247	105778364	+	105777247	105778100	3pMXE	0.5	50	50	ENSMUST00000212329.2	ENSMUSG00000069922.13	Ces3a	chr8	protein_coding	carboxylesterase 3A
chr8	105780080	105782211	+	105780316	105782211	5pMXE	0.5	50	50	ENSMUST00000212481.2	ENSMUSG00000069922.13	Ces3a	chr8	protein_coding	carboxylesterase 3A
chr8	105818290	105819527	+	105818290;105819386	105819237;105819527	ES	0.5	50	50	ENSMUST00000093221.13	ENSMUSG00000062181.15	Ces3b	chr8	protein_coding	carboxylesterase 3B
chr8	105818216	105819237	+	105818290	105819237	A5SS	0.5	50	50	ENSMUST00000093221.13	ENSMUSG00000062181.15	Ces3b	chr8	protein_coding	carboxylesterase 3B
chr8	105818290	105819527	+	105819386	105819527	A5SS&ES	0.5	50	50	ENSMUST00000173088.2	ENSMUSG00000062181.15	Ces3b	chr8	protein_coding	carboxylesterase 3B
chr8	105898024	105921107	+	105898024;105905341	105905225;105921107	ES	0.5	50	50	ENSMUST00000052209.9	ENSMUSG00000031885.15	Cbfb	chr8	protein_coding	core binding factor beta
chr8	105921223	105942536	+	105921223;105929179	105929084;105942536	ES	0.33	50	50	ENSMUST00000052209.9	ENSMUSG00000031885.15	Cbfb	chr8	protein_coding	core binding factor beta
chr8	105898296	105905225	+	105898024	105905225	A5SS	0.33	50	50	ENSMUST00000052209.9	ENSMUSG00000031885.15	Cbfb	chr8	protein_coding	core binding factor beta
chr8	105898492	105905225	+	105898024	105905225	A5SS	0.33	50	50	ENSMUST00000052209.9	ENSMUSG00000031885.15	Cbfb	chr8	protein_coding	core binding factor beta
chr8	105929210	105942536	+	105929179	105942536	A5SS	0.33	50	50	ENSMUST00000052209.9	ENSMUSG00000031885.15	Cbfb	chr8	protein_coding	core binding factor beta
chr8	105921223	105942536	+	105921223;105929210	105929084;105942536	ES	0.33	50	50	ENSMUST00000109392.9	ENSMUSG00000031885.15	Cbfb	chr8	protein_coding	core binding factor beta
chr8	105898024	105921107	+	105898024	105905225	3pMXE	0.5	50	50	ENSMUST00000186070.2	ENSMUSG00000031885.15	Cbfb	chr8	protein_coding	core binding factor beta
chr8	105898492	105905225	+	105898296	105905225	A5SS	0.33	50	50	ENSMUST00000190915.7	ENSMUSG00000031885.15	Cbfb	chr8	protein_coding	core binding factor beta
chr8	105966704	105967659	+	105966704;105967570	105967473;105967659	ES	0.33	50	50	ENSMUST00000034361.10	ENSMUSG00000031889.10	D230025D16Rik	chr8	protein_coding	RIKEN cDNA D230025D16 gene
chr8	105967771	105973470	+	105967771;105973186	105973053;105973470	ES	0.5	50	50	ENSMUST00000034361.10	ENSMUSG00000031889.10	D230025D16Rik	chr8	protein_coding	RIKEN cDNA D230025D16 gene
chr8	105975418	105975961	+	105975418	105976051	A3SS	0.33	50	50	ENSMUST00000034361.10	ENSMUSG00000031889.10	D230025D16Rik	chr8	protein_coding	RIKEN cDNA D230025D16 gene
chr8	105966382	105967659	+	105966382;105966704	105966610;105967659	ES	0.33	50	50	ENSMUST00000141957.8	ENSMUSG00000031889.10	D230025D16Rik	chr8	protein_coding	RIKEN cDNA D230025D16 gene
chr8	105975418;105976287	105975961;105977351	+	105975418	105977351	cassetteExon	0.5	100	100	ENSMUST00000124113.8	ENSMUSG00000031889.10	D230025D16Rik	chr8	protein_coding	RIKEN cDNA D230025D16 gene
chr8	105975418;105976287	105976051;105977351	+	105975418	105977351	cassetteExon	0.5	100	100	ENSMUST00000124113.8	ENSMUSG00000031889.10	D230025D16Rik	chr8	protein_coding	RIKEN cDNA D230025D16 gene
chr8	105967570	105967659	+	105966382	105967659	A5SS	0.33	50	50	ENSMUST00000124113.8	ENSMUSG00000031889.10	D230025D16Rik	chr8	protein_coding	RIKEN cDNA D230025D16 gene
chr8	105966382	105967659	+	105966382	105966610	3pMXE	0.5	50	50	ENSMUST00000132964.2	ENSMUSG00000031889.10	D230025D16Rik	chr8	protein_coding	RIKEN cDNA D230025D16 gene
chr8	105967771	105973470	+	105973186	105973470	5pMXE	0.5	50	50	ENSMUST00000133035.2	ENSMUSG00000031889.10	D230025D16Rik	chr8	protein_coding	RIKEN cDNA D230025D16 gene
chr8	105986261	105987154	-	105986261;105986619	105986342;105987154	ES	0.33	50	50	ENSMUST00000034359.10	ENSMUSG00000031887.14	Tradd	chr8	protein_coding	TNFRSF1A-associated via death domain
chr8	105986796	105987154	-	105986619	105987154	A3SS	0.33	50	50	ENSMUST00000034359.10	ENSMUSG00000031887.14	Tradd	chr8	protein_coding	TNFRSF1A-associated via death domain
chr8	105986261	105987154	-	105986261	105986342	5pMXE	0.5	50	50	ENSMUST00000136239.2	ENSMUSG00000031887.14	Tradd	chr8	protein_coding	TNFRSF1A-associated via death domain
chr8	105986261;105986796	105986342;105987154	-	105986261	105987154	cassetteExon	0.5	100	100	ENSMUST00000144762.8	ENSMUSG00000031887.14	Tradd	chr8	protein_coding	TNFRSF1A-associated via death domain
chr8	105986261	105987154	-	105986796	105987154	3pMXE	0.33	50	50	ENSMUST00000147670.2	ENSMUSG00000031887.14	Tradd	chr8	protein_coding	TNFRSF1A-associated via death domain
chr8	105993797;105994498	105994297;105994642	+	105993797	105994642	cassetteExon	0.5	100	100	ENSMUST00000036221.12	ENSMUSG00000033313.12	Fbxl8	chr8	protein_coding	F-box and leucine-rich repeat protein 8
chr8	105996628	105997401	+	105996628;105997287	105997179;105997401	ES	0.5	50	50	ENSMUST00000173640.8	ENSMUSG00000033249.11	Hsf4	chr8	protein_coding	heat shock transcription factor 4
chr8	105998840	105999442	+	105998840;105999216	105999092;105999442	ES	0.5	50	50	ENSMUST00000173640.8	ENSMUSG00000033249.11	Hsf4	chr8	protein_coding	heat shock transcription factor 4
chr8	105999216	106001278	+	105999216;105999565	105999442;106001278	ES	0.5	50	50	ENSMUST00000173640.8	ENSMUSG00000033249.11	Hsf4	chr8	protein_coding	heat shock transcription factor 4
chr8	106001545	106002136	+	106001545;106001744	106001675;106002136	ES	0.5	50	50	ENSMUST00000173640.8	ENSMUSG00000033249.11	Hsf4	chr8	protein_coding	heat shock transcription factor 4
chr8	105998840	105999078	+	105998840	105999092	A3SS	0.33	50	50	ENSMUST00000173640.8	ENSMUSG00000033249.11	Hsf4	chr8	protein_coding	heat shock transcription factor 4
chr8	105999216	105999338	+	105999216	105999442	A3SS	0.33	50	50	ENSMUST00000173640.8	ENSMUSG00000033249.11	Hsf4	chr8	protein_coding	heat shock transcription factor 4
chr8	105999216	106001278	+	105999216;105999565	105999338;106001278	ES	0.5	50	50	ENSMUST00000036127.9	ENSMUSG00000033249.11	Hsf4	chr8	protein_coding	heat shock transcription factor 4
chr8	105998840	105999442	+	105998840	105999092	A3SS&ES	0.33	50	50	ENSMUST00000036127.9	ENSMUSG00000033249.11	Hsf4	chr8	protein_coding	heat shock transcription factor 4
chr8	105998840;105999216	105999078;105999442	+	105998840	105999442	cassetteExon	0.5	100	100	ENSMUST00000172525.8	ENSMUSG00000033249.11	Hsf4	chr8	protein_coding	heat shock transcription factor 4
chr8	105998840;105999216	105999078;106001278	+	105998840;105999565	105999442;106001278	MXE	0.5	100	100	ENSMUST00000172525.8	ENSMUSG00000033249.11	Hsf4	chr8	protein_coding	heat shock transcription factor 4
chr8	105998840;105999216	105999092;106001278	+	105998840;105999565	105999442;106001278	MXE	0.5	100	100	ENSMUST00000172525.8	ENSMUSG00000033249.11	Hsf4	chr8	protein_coding	heat shock transcription factor 4
chr8	106012501	106016036	-	106012501	106015401	5pMXE	0.33	50	50	ENSMUST00000212922.2	ENSMUSG00000014837.16	4931428F04Rik	chr8	protein_coding	RIKEN cDNA 4931428F04 gene
chr8	106012501	106015425	-	106012501	106015401	A5SS	0.33	50	50	ENSMUST00000212922.2	ENSMUSG00000014837.16	4931428F04Rik	chr8	protein_coding	RIKEN cDNA 4931428F04 gene
chr8	106012501;106015797	106015401;106016036	-	106012501	106016036	cassetteExon	0.5	100	100	ENSMUST00000014981.8	ENSMUSG00000014837.16	4931428F04Rik	chr8	protein_coding	RIKEN cDNA 4931428F04 gene
chr8	106012501;106015797	106015425;106016036	-	106012501	106016036	cassetteExon	0.5	100	100	ENSMUST00000014981.8	ENSMUSG00000014837.16	4931428F04Rik	chr8	protein_coding	RIKEN cDNA 4931428F04 gene
chr8	106012501	106016036	-	106012501	106015425	5pMXE	0.33	50	50	ENSMUST00000212219.2	ENSMUSG00000014837.16	4931428F04Rik	chr8	protein_coding	RIKEN cDNA 4931428F04 gene
chr8	106014701	106015425	-	106012501	106015425	A3SS	0.5	50	50	ENSMUST00000212219.2	ENSMUSG00000014837.16	4931428F04Rik	chr8	protein_coding	RIKEN cDNA 4931428F04 gene
chr8	106017194	106017536	+	106016371	106017536	A5SS	0.5	50	50	ENSMUST00000212232.2	ENSMUSG00000110611.2	Gm20163	chr8	lncRNA	predicted gene, 20163
chr8	106021816	106022258	-	106021816;106022067	106021892;106022258	ES	0.5	50	50	ENSMUST00000057855.4	ENSMUSG00000043251.7	Exoc3l	chr8	protein_coding	exocyst complex component 3-like
chr8	106022067	106022538	-	106022067;106022338	106022258;106022538	ES	0.33	50	50	ENSMUST00000057855.4	ENSMUSG00000043251.7	Exoc3l	chr8	protein_coding	exocyst complex component 3-like
chr8	106021816	106022538	-	106021816;106022338	106022258;106022538	ES	0.33	50	50	ENSMUST00000212777.2	ENSMUSG00000043251.7	Exoc3l	chr8	protein_coding	exocyst complex component 3-like
chr8	106021816;106022067	106021892;106022538	-	106021816;106022338	106022258;106022538	MXE	0.5	100	100	ENSMUST00000212777.2	ENSMUSG00000043251.7	Exoc3l	chr8	protein_coding	exocyst complex component 3-like
chr8	106021816;106022067	106021892;106022538	-	106021816	106022538	cassetteExon	0.5	100	100	ENSMUST00000212215.2	ENSMUSG00000043251.7	Exoc3l	chr8	protein_coding	exocyst complex component 3-like
chr8	106021816;106022338	106021892;106022538	-	106021816	106022538	cassetteExon	0.5	100	100	ENSMUST00000212215.2	ENSMUSG00000043251.7	Exoc3l	chr8	protein_coding	exocyst complex component 3-like
chr8	106021816	106022538	-	106022338	106022538	3pMXE	0.33	50	50	ENSMUST00000212261.2	ENSMUSG00000043251.7	Exoc3l	chr8	protein_coding	exocyst complex component 3-like
chr8	106022067	106022538	-	106022338	106022538	A3SS	0.33	50	50	ENSMUST00000212261.2	ENSMUSG00000043251.7	Exoc3l	chr8	protein_coding	exocyst complex component 3-like
chr8	106024507	106024704	+	106024507	106024913	A3SS	0.5	50	50	ENSMUST00000015003.10	ENSMUSG00000014859.10	E2f4	chr8	protein_coding	E2F transcription factor 4
chr8	106032639;106032819	106032747;106033228	+	106032639	106033228	cassetteExon	0.5	100	100	ENSMUST00000212046.2	ENSMUSG00000014791.11	Elmo3	chr8	protein_coding	engulfment and cell motility 3
chr8	106032639;106033060	106032747;106033228	+	106032639	106033228	cassetteExon	0.5	100	100	ENSMUST00000212046.2	ENSMUSG00000014791.11	Elmo3	chr8	protein_coding	engulfment and cell motility 3
chr8	106033397	106033486	+	106033397	106033473	A3SS	0.5	50	50	ENSMUST00000212046.2	ENSMUSG00000014791.11	Elmo3	chr8	protein_coding	engulfment and cell motility 3
chr8	106032819	106033228	+	106032819;106033060	106033010;106033228	ES	0.33	50	50	ENSMUST00000109375.4	ENSMUSG00000014791.11	Elmo3	chr8	protein_coding	engulfment and cell motility 3
chr8	106032628	106032747	+	106032639	106032747	A5SS	0.5	50	50	ENSMUST00000109375.4	ENSMUSG00000014791.11	Elmo3	chr8	protein_coding	engulfment and cell motility 3
chr8	106032819	106033228	+	106032819	106033010	A3SS	0.5	50	50	ENSMUST00000212345.2	ENSMUSG00000014791.11	Elmo3	chr8	protein_coding	engulfment and cell motility 3
chr8	106039894;106040528	106040053;106041708	-	106039894	106041708	cassetteExon	0.5	100	100	ENSMUST00000209964.2	ENSMUSG00000041679.10	Lrrc29	chr8	protein_coding	leucine rich repeat containing 29
chr8	106042700	106049897	-	106042654	106049897	A3SS	0.5	50	50	ENSMUST00000209964.2	ENSMUSG00000041679.10	Lrrc29	chr8	protein_coding	leucine rich repeat containing 29
chr8	106039894	106041708	-	106040528	106041708	A3SS&ES	0.5	50	50	ENSMUST00000211199.2	ENSMUSG00000041679.10	Lrrc29	chr8	protein_coding	leucine rich repeat containing 29
chr8	106055090	106055404	+	106055090;106055324	106055240;106055404	ES	0.5	50	50	ENSMUST00000015000.12	ENSMUSG00000014856.13	Tmem208	chr8	protein_coding	transmembrane protein 208
chr8	106055116	106055240	+	106055090	106055240	A5SS	0.5	50	50	ENSMUST00000015000.12	ENSMUSG00000014856.13	Tmem208	chr8	protein_coding	transmembrane protein 208
chr8	106055090	106055404	+	106055324	106055404	A5SS&ES	0.5	50	50	ENSMUST00000153146.9	ENSMUSG00000014856.13	Tmem208	chr8	protein_coding	transmembrane protein 208
chr8	106055090;106055534	106055240;106061275	+	106055090	106061275	cassetteExon	0.5	100	100	ENSMUST00000098453.9	ENSMUSG00000014856.13	Tmem208	chr8	protein_coding	transmembrane protein 208
chr8	106055090;106055534	106055404;106061275	+	106055090	106061275	cassetteExon	0.5	100	100	ENSMUST00000098453.9	ENSMUSG00000014856.13	Tmem208	chr8	protein_coding	transmembrane protein 208
chr8	106061434	106063014	-	106061434;106062892	106062869;106063014	ES	0.5	50	50	ENSMUST00000132777.8	ENSMUSG00000014778.11	Fhod1	chr8	protein_coding	formin homology 2 domain containing 1
chr8	106064113	106064307	-	106064061	106064307	A3SS	0.5	50	50	ENSMUST00000132777.8	ENSMUSG00000014778.11	Fhod1	chr8	protein_coding	formin homology 2 domain containing 1
chr8	106084115	106085006	+	106084115;106084283	106084213;106085006	ES	0.5	50	50	ENSMUST00000073149.7	ENSMUSG00000014786.9	Slc9a5	chr8	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 5
chr8	106086085;106088270	106088193;106089895	+	106086085	106089895	cassetteExon	0.5	100	100	ENSMUST00000073149.7	ENSMUSG00000014786.9	Slc9a5	chr8	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 5
chr8	106100494;106101531	106101385;106102096	+	106100494	106102096	cassetteExon	0.5	100	100	ENSMUST00000160650.2	ENSMUSG00000014782.17	Plekhg4	chr8	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 4
chr8	106100494;106101613	106101385;106102096	+	106100494	106102096	cassetteExon	0.5	100	100	ENSMUST00000160650.2	ENSMUSG00000014782.17	Plekhg4	chr8	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 4
chr8	106101613	106102096	+	106101531	106102096	A5SS	0.33	50	50	ENSMUST00000214056.2	ENSMUSG00000014782.17	Plekhg4	chr8	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 4
chr8	106102376	106102822	+	106102743	106102822	A5SS&ES	0.5	50	50	ENSMUST00000214056.2	ENSMUSG00000014782.17	Plekhg4	chr8	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 4
chr8	106100494	106102096	+	106101613	106102096	5pMXE	0.33	50	50	ENSMUST00000159286.8	ENSMUSG00000014782.17	Plekhg4	chr8	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 4
chr8	106122094	106134960	-	106122094;106123112	106122962;106134960	ES	0.5	50	50	ENSMUST00000167294.8	ENSMUSG00000051648.14	Kctd19	chr8	protein_coding	potassium channel tetramerisation domain containing 19
chr8	106118715;106120263	106120195;106120458	-	106118715	106120458	cassetteExon	0.5	100	100	ENSMUST00000167294.8	ENSMUSG00000051648.14	Kctd19	chr8	protein_coding	potassium channel tetramerisation domain containing 19
chr8	106109681	106111363	-	106109701	106111363	A3SS	0.5	50	50	ENSMUST00000167294.8	ENSMUSG00000051648.14	Kctd19	chr8	protein_coding	potassium channel tetramerisation domain containing 19
chr8	106111806	106111962	-	106111809	106111962	A3SS	0.5	50	50	ENSMUST00000167294.8	ENSMUSG00000051648.14	Kctd19	chr8	protein_coding	potassium channel tetramerisation domain containing 19
chr8	106140342	106151889	+	106140255	106151889	A5SS	0.5	50	50	ENSMUST00000139900.9	ENSMUSG00000054320.17	Lrrc36	chr8	protein_coding	leucine rich repeat containing 36
chr8	106172888	106176013	+	106172888	106176019	A3SS	0.5	50	50	ENSMUST00000213547.2	ENSMUSG00000054320.17	Lrrc36	chr8	protein_coding	leucine rich repeat containing 36
chr8	106178931	106181837	+	106178931	106181826	A3SS	0.5	50	50	ENSMUST00000213547.2	ENSMUSG00000054320.17	Lrrc36	chr8	protein_coding	leucine rich repeat containing 36
chr8	106187764	106190466	+	106187764	106190375	A3SS	0.5	50	50	ENSMUST00000213547.2	ENSMUSG00000054320.17	Lrrc36	chr8	protein_coding	leucine rich repeat containing 36
chr8	106195265	106195351	-	106195265	106197912	A5SS	0.5	50	50	ENSMUST00000014990.13	ENSMUSG00000014846.13	Tppp3	chr8	protein_coding	tubulin polymerization-promoting protein family member 3
chr8	106203161	106203649	-	106203161;106203370	106203246;106203649	ES	0.5	50	50	ENSMUST00000212303.2	ENSMUSG00000039199.7	Zdhhc1	chr8	protein_coding	zinc finger, DHHC domain containing 1
chr8	106199872	106200116	-	106199931	106200116	A3SS	0.5	50	50	ENSMUST00000212303.2	ENSMUSG00000039199.7	Zdhhc1	chr8	protein_coding	zinc finger, DHHC domain containing 1
chr8	106293102	106294599	+	106293102	106304096	A3SS	0.5	50	50	ENSMUST00000192691.2	ENSMUSG00000104168.2	Gm38250	chr8	lncRNA	predicted gene, 38250
chr8	106294358	106306282	-	106294358	106294848	5pMXE	0.33	50	50	ENSMUST00000005849.11	ENSMUSG00000005705.11	Agrp	chr8	protein_coding	agouti related neuropeptide
chr8	106294358	106310968	-	106294358	106294848	5pMXE	0.33	50	50	ENSMUST00000005849.11	ENSMUSG00000005705.11	Agrp	chr8	protein_coding	agouti related neuropeptide
chr8	106351107	106363912	-	106311009	106363912	A3SS	0.5	50	50	ENSMUST00000194091.6	ENSMUSG00000005705.11	Agrp	chr8	protein_coding	agouti related neuropeptide
chr8	106294358	106306282	-	106294358	106310968	A5SS	0.33	50	50	ENSMUST00000194091.6	ENSMUSG00000005705.11	Agrp	chr8	protein_coding	agouti related neuropeptide
chr8	106351107	106363912	-	106351107	106363748	A5SS	0.5	50	50	ENSMUST00000182863.2	ENSMUSG00000098120.2	Gm5914	chr8	lncRNA	predicted gene 5914
chr8	106370264	106390386	+	106370264	106393291	A3SS	0.5	50	50	ENSMUST00000132679.8	ENSMUSG00000005698.16	Ctcf	chr8	protein_coding	CCCTC-binding factor
chr8	106403982	106406035	+	106403982	106406706	A3SS	0.33	50	50	ENSMUST00000132679.8	ENSMUSG00000005698.16	Ctcf	chr8	protein_coding	CCCTC-binding factor
chr8	106403982	106406703	+	106403982	106406706	A3SS	0.33	50	50	ENSMUST00000132679.8	ENSMUSG00000005698.16	Ctcf	chr8	protein_coding	CCCTC-binding factor
chr8	106363596	106370148	+	106363352	106370148	A5SS	0.33	50	50	ENSMUST00000132679.8	ENSMUSG00000005698.16	Ctcf	chr8	protein_coding	CCCTC-binding factor
chr8	106364211	106370148	+	106363352	106370148	A5SS	0.33	50	50	ENSMUST00000132679.8	ENSMUSG00000005698.16	Ctcf	chr8	protein_coding	CCCTC-binding factor
chr8	106391658	106393291	+	106370264	106393291	A5SS	0.5	50	50	ENSMUST00000132679.8	ENSMUSG00000005698.16	Ctcf	chr8	protein_coding	CCCTC-binding factor
chr8	106403982	106406035	+	106403982	106406703	A3SS	0.33	50	50	ENSMUST00000005841.16	ENSMUSG00000005698.16	Ctcf	chr8	protein_coding	CCCTC-binding factor
chr8	106364211	106370148	+	106363596	106370148	A5SS	0.33	50	50	ENSMUST00000128510.8	ENSMUSG00000005698.16	Ctcf	chr8	protein_coding	CCCTC-binding factor
chr8	106424070	106424500	+	106424070;106424273	106424193;106424500	ES	0.5	50	50	ENSMUST00000213019.2	ENSMUSG00000050357.10	Carmil2	chr8	protein_coding	capping protein regulator and myosin 1 linker 2
chr8	106426123	106426493	-	106426123;106426362	106426211;106426493	ES	0.5	50	50	ENSMUST00000211870.2	ENSMUSG00000038000.11	Acd	chr8	protein_coding	adrenocortical dysplasia
chr8	106427172	106427552	-	106427172;106427471	106427335;106427552	ES	0.5	50	50	ENSMUST00000211870.2	ENSMUSG00000038000.11	Acd	chr8	protein_coding	adrenocortical dysplasia
chr8	106426680	106426914	-	106426792	106426914	A3SS	0.5	50	50	ENSMUST00000211870.2	ENSMUSG00000038000.11	Acd	chr8	protein_coding	adrenocortical dysplasia
chr8	106427034	106427335	-	106427172	106427335	A3SS&ES	0.5	50	50	ENSMUST00000211870.2	ENSMUSG00000038000.11	Acd	chr8	protein_coding	adrenocortical dysplasia
chr8	106427172	106427552	-	106427471	106427552	A3SS&ES	0.5	50	50	ENSMUST00000212642.2	ENSMUSG00000038000.11	Acd	chr8	protein_coding	adrenocortical dysplasia
chr8	106429028	106429243	+	106429028	106429240	A3SS	0.5	50	50	ENSMUST00000212634.2	ENSMUSG00000005699.17	Pard6a	chr8	protein_coding	par-6 family cell polarity regulator alpha
chr8	106427949	106428806	+	106427918	106428806	A5SS	0.33	50	50	ENSMUST00000212634.2	ENSMUSG00000005699.17	Pard6a	chr8	protein_coding	par-6 family cell polarity regulator alpha
chr8	106428435	106428806	+	106427918	106428806	A5SS	0.33	50	50	ENSMUST00000212634.2	ENSMUSG00000005699.17	Pard6a	chr8	protein_coding	par-6 family cell polarity regulator alpha
chr8	106428938	106429240	+	106429028	106429240	A5SS	0.5	50	50	ENSMUST00000212634.2	ENSMUSG00000005699.17	Pard6a	chr8	protein_coding	par-6 family cell polarity regulator alpha
chr8	106428435	106428806	+	106427949	106428806	A5SS	0.33	50	50	ENSMUST00000098444.9	ENSMUSG00000005699.17	Pard6a	chr8	protein_coding	par-6 family cell polarity regulator alpha
chr8	106435147	106435428	+	106434471	106435428	A5SS	0.5	50	50	ENSMUST00000212144.2	ENSMUSG00000013158.7	4933405L10Rik	chr8	protein_coding	RIKEN cDNA 4933405L10 gene
chr8	106436216	106436320	+	106436216	106436293	A3SS	0.5	50	50	ENSMUST00000013302.7	ENSMUSG00000013158.7	4933405L10Rik	chr8	protein_coding	RIKEN cDNA 4933405L10 gene
chr8	106444282;106449676	106449481;106454620	-	106444282	106454620	cassetteExon	0.5	100	100	ENSMUST00000013294.16	ENSMUSG00000013150.16	Gfod2	chr8	protein_coding	glucose-fructose oxidoreductase domain containing 2
chr8	106453792	106454620	-	106444282	106454620	A3SS	0.33	50	50	ENSMUST00000013294.16	ENSMUSG00000013150.16	Gfod2	chr8	protein_coding	glucose-fructose oxidoreductase domain containing 2
chr8	106453792	106454620	-	106449676	106454620	A3SS	0.33	50	50	ENSMUST00000155038.3	ENSMUSG00000013150.16	Gfod2	chr8	protein_coding	glucose-fructose oxidoreductase domain containing 2
chr8	106569414;106570849	106570523;106571016	+	106569414	106571016	cassetteExon	0.5	100	100	ENSMUST00000212566.2	ENSMUSG00000031893.8	Tsnaxip1	chr8	protein_coding	translin-associated factor X (Tsnax) interacting protein 1
chr8	106554459	106560091	+	106554459	106566623	A3SS	0.5	50	50	ENSMUST00000211949.2	ENSMUSG00000031893.8	Tsnaxip1	chr8	protein_coding	translin-associated factor X (Tsnax) interacting protein 1
chr8	106565432	106566623	+	106554459	106566623	A5SS	0.5	50	50	ENSMUST00000211949.2	ENSMUSG00000031893.8	Tsnaxip1	chr8	protein_coding	translin-associated factor X (Tsnax) interacting protein 1
chr8	106576555;106577726	106577593;106578503	-	106576555	106578503	cassetteExon	0.5	100	100	ENSMUST00000212357.2	ENSMUSG00000036672.6	Cenpt	chr8	protein_coding	centromere protein T
chr8	106576153	106578503	-	106576555	106578503	A3SS	0.2	50	50	ENSMUST00000212357.2	ENSMUSG00000036672.6	Cenpt	chr8	protein_coding	centromere protein T
chr8	106576401	106578503	-	106576555	106578503	A3SS	0.2	50	50	ENSMUST00000212357.2	ENSMUSG00000036672.6	Cenpt	chr8	protein_coding	centromere protein T
chr8	106576419	106578503	-	106576555	106578503	A3SS	0.2	50	50	ENSMUST00000212357.2	ENSMUSG00000036672.6	Cenpt	chr8	protein_coding	centromere protein T
chr8	106572068	106572948	-	106572068;106572853	106572797;106572948	ES	0.5	50	50	ENSMUST00000212431.2	ENSMUSG00000036672.6	Cenpt	chr8	protein_coding	centromere protein T
chr8	106576153	106578503	-	106576153;106576419	106576258;106578503	ES	0.2	50	50	ENSMUST00000212431.2	ENSMUSG00000036672.6	Cenpt	chr8	protein_coding	centromere protein T
chr8	106575531;106575687	106575645;106575819	-	106575531	106575819	cassetteExon	0.5	100	100	ENSMUST00000212431.2	ENSMUSG00000036672.6	Cenpt	chr8	protein_coding	centromere protein T
chr8	106576181	106576258	-	106576153	106576258	A3SS	0.5	50	50	ENSMUST00000212431.2	ENSMUSG00000036672.6	Cenpt	chr8	protein_coding	centromere protein T
chr8	106576401	106578503	-	106576419	106578503	A3SS	0.2	50	50	ENSMUST00000212431.2	ENSMUSG00000036672.6	Cenpt	chr8	protein_coding	centromere protein T
chr8	106577726	106578503	-	106576419	106578503	A3SS	0.2	50	50	ENSMUST00000212431.2	ENSMUSG00000036672.6	Cenpt	chr8	protein_coding	centromere protein T
chr8	106572068	106572948	-	106572068	106572797	A5SS	0.5	50	50	ENSMUST00000212803.2	ENSMUSG00000036672.6	Cenpt	chr8	protein_coding	centromere protein T
chr8	106576153	106578503	-	106576153;106576555	106576258;106578503	ES	0.2	50	50	ENSMUST00000212625.2	ENSMUSG00000036672.6	Cenpt	chr8	protein_coding	centromere protein T
chr8	106575531	106575819	-	106575687	106575819	3pMXE	0.5	50	50	ENSMUST00000212839.2	ENSMUSG00000036672.6	Cenpt	chr8	protein_coding	centromere protein T
chr8	106576153	106578503	-	106576401	106578503	A3SS&ES	0.2	50	50	ENSMUST00000212839.2	ENSMUSG00000036672.6	Cenpt	chr8	protein_coding	centromere protein T
chr8	106577726	106578503	-	106576401	106578503	A3SS	0.2	50	50	ENSMUST00000212839.2	ENSMUSG00000036672.6	Cenpt	chr8	protein_coding	centromere protein T
chr8	106576153;106576401	106576258;106578503	-	106576153	106578503	cassetteExon	0.5	100	100	ENSMUST00000212797.2	ENSMUSG00000036672.6	Cenpt	chr8	protein_coding	centromere protein T
chr8	106577726	106578503	-	106576153	106578503	A3SS	0.2	50	50	ENSMUST00000212797.2	ENSMUSG00000036672.6	Cenpt	chr8	protein_coding	centromere protein T
chr8	106587337;106593305	106593030;106602166	+	106587337	106602166	cassetteExon	0.5	100	100	ENSMUST00000008594.9	ENSMUSG00000008450.9	Nutf2	chr8	protein_coding	nuclear transport factor 2
chr8	106587337;106597064	106596883;106602166	+	106587337	106602166	cassetteExon	0.5	100	100	ENSMUST00000008594.9	ENSMUSG00000008450.9	Nutf2	chr8	protein_coding	nuclear transport factor 2
chr8	106587337;106601368	106601180;106602166	+	106587337	106602166	cassetteExon	0.5	100	100	ENSMUST00000008594.9	ENSMUSG00000008450.9	Nutf2	chr8	protein_coding	nuclear transport factor 2
chr8	106587788	106602166	+	106587337	106602166	A5SS	0.2	50	50	ENSMUST00000008594.9	ENSMUSG00000008450.9	Nutf2	chr8	protein_coding	nuclear transport factor 2
chr8	106587337;106597064	106596883;106602166	+	106587337;106593305	106593030;106602166	MXE	0.5	100	100	ENSMUST00000212610.2	ENSMUSG00000008450.9	Nutf2	chr8	protein_coding	nuclear transport factor 2
chr8	106587337;106601368	106601180;106602166	+	106587337;106593305	106593030;106602166	MXE	0.5	100	100	ENSMUST00000212610.2	ENSMUSG00000008450.9	Nutf2	chr8	protein_coding	nuclear transport factor 2
chr8	106587788	106602166	+	106593305	106602166	A5SS&ES	0.2	50	50	ENSMUST00000212610.2	ENSMUSG00000008450.9	Nutf2	chr8	protein_coding	nuclear transport factor 2
chr8	106587337;106601368	106601180;106602166	+	106587337;106597064	106596883;106602166	MXE	0.5	100	100	ENSMUST00000212484.2	ENSMUSG00000008450.9	Nutf2	chr8	protein_coding	nuclear transport factor 2
chr8	106587788	106602166	+	106597064	106602166	A5SS&ES	0.2	50	50	ENSMUST00000212484.2	ENSMUSG00000008450.9	Nutf2	chr8	protein_coding	nuclear transport factor 2
chr8	106587788	106602166	+	106601368	106602166	A5SS&ES	0.2	50	50	ENSMUST00000212200.2	ENSMUSG00000008450.9	Nutf2	chr8	protein_coding	nuclear transport factor 2
chr8	106614677	106614750	+	106614677	106614753	A3SS	0.5	50	50	ENSMUST00000040254.16	ENSMUSG00000036270.17	Edc4	chr8	protein_coding	enhancer of mRNA decapping 4
chr8	106615150	106615228	+	106615150	106615231	A3SS	0.5	50	50	ENSMUST00000040254.16	ENSMUSG00000036270.17	Edc4	chr8	protein_coding	enhancer of mRNA decapping 4
chr8	106616172	106616263	+	106616172	106616257	A3SS	0.33	50	50	ENSMUST00000040254.16	ENSMUSG00000036270.17	Edc4	chr8	protein_coding	enhancer of mRNA decapping 4
chr8	106616172	106616305	+	106616172	106616257	A3SS	0.33	50	50	ENSMUST00000040254.16	ENSMUSG00000036270.17	Edc4	chr8	protein_coding	enhancer of mRNA decapping 4
chr8	106617079	106617154	+	106617049	106617154	A5SS	0.5	50	50	ENSMUST00000040254.16	ENSMUSG00000036270.17	Edc4	chr8	protein_coding	enhancer of mRNA decapping 4
chr8	106616172	106616263	+	106616172	106616305	A3SS	0.33	50	50	ENSMUST00000119261.8	ENSMUSG00000036270.17	Edc4	chr8	protein_coding	enhancer of mRNA decapping 4
chr8	106613491;106613845	106613586;106613933	+	106613491	106613933	cassetteExon	0.5	100	100	ENSMUST00000136048.8	ENSMUSG00000036270.17	Edc4	chr8	protein_coding	enhancer of mRNA decapping 4
chr8	106620299	106621001	+	106620299	106620998	A3SS	0.5	50	50	ENSMUST00000136048.8	ENSMUSG00000036270.17	Edc4	chr8	protein_coding	enhancer of mRNA decapping 4
chr8	106663386	106663498	-	106663386	106663614	A5SS	0.5	50	50	ENSMUST00000212332.2	ENSMUSG00000031897.10	Psmb10	chr8	protein_coding	proteasome (prosome, macropain) subunit, beta type 10
chr8	106687402	106691026	-	106687402	106692557	A5SS	0.33	50	50	ENSMUST00000116429.9	ENSMUSG00000017765.18	Slc12a4	chr8	protein_coding	solute carrier family 12, member 4
chr8	106687402	106692551	-	106687402	106692557	A5SS	0.33	50	50	ENSMUST00000116429.9	ENSMUSG00000017765.18	Slc12a4	chr8	protein_coding	solute carrier family 12, member 4
chr8	106687402	106691026	-	106687402	106692551	A5SS	0.33	50	50	ENSMUST00000034370.17	ENSMUSG00000017765.18	Slc12a4	chr8	protein_coding	solute carrier family 12, member 4
chr8	106716015	106716524	-	106716015;106716230	106716101;106716524	ES	0.5	50	50	ENSMUST00000117555.8	ENSMUSG00000053687.16	Dpep2	chr8	protein_coding	dipeptidase 2
chr8	106716650;106717542	106717228;106718280	-	106716650	106718280	cassetteExon	0.5	100	100	ENSMUST00000117555.8	ENSMUSG00000053687.16	Dpep2	chr8	protein_coding	dipeptidase 2
chr8	106713126	106714716	-	106712888	106714716	A3SS	0.5	50	50	ENSMUST00000117555.8	ENSMUSG00000053687.16	Dpep2	chr8	protein_coding	dipeptidase 2
chr8	106717542	106722815	-	106717542	106718280	5pMXE	0.5	50	50	ENSMUST00000034373.8	ENSMUSG00000053687.16	Dpep2	chr8	protein_coding	dipeptidase 2
chr8	106716015	106716524	-	106716230	106716524	A3SS&ES	0.5	50	50	ENSMUST00000081998.13	ENSMUSG00000115067.2	Dpep2	chr8	protein_coding	dipeptidase 2
chr8	106716650	106718280	-	106716650	106717228	A5SS&ES	0.5	50	50	ENSMUST00000081998.13	ENSMUSG00000115067.2	Dpep2	chr8	protein_coding	dipeptidase 2
chr8	106738210	106742456	+	106722655	106742456	A5SS	0.5	50	50	ENSMUST00000142898.2	ENSMUSG00000031901.13	Dus2	chr8	protein_coding	dihydrouridine synthase 2
chr8	106757075	106760355	+	106757075;106758373	106758330;106760355	ES	0.5	50	50	ENSMUST00000034375.11	ENSMUSG00000031901.13	Dus2	chr8	protein_coding	dihydrouridine synthase 2
chr8	106786625	106805236	+	106785550	106805236	A5SS	0.5	50	50	ENSMUST00000212936.2	ENSMUSG00000031902.11	Nfatc3	chr8	protein_coding	nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3
chr8	106835761;106846057	106845954;106854550	+	106835761	106854550	cassetteExon	0.5	100	100	ENSMUST00000212742.2	ENSMUSG00000031902.11	Nfatc3	chr8	protein_coding	nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3
chr8	106859568	106859641	-	106859539	106859641	A3SS	0.5	50	50	ENSMUST00000115979.9	ENSMUSG00000084128.11	Esrp2	chr8	protein_coding	epithelial splicing regulatory protein 2
chr8	106860518	106860592	-	106860521	106860592	A3SS	0.5	50	50	ENSMUST00000115979.9	ENSMUSG00000084128.11	Esrp2	chr8	protein_coding	epithelial splicing regulatory protein 2
chr8	106863982;106864176	106864101;106864460	+	106863982	106864460	cassetteExon	0.5	100	100	ENSMUST00000137995.8	ENSMUSG00000086390.8	1810019D21Rik	chr8	lncRNA	RIKEN cDNA 1810019D21 gene
chr8	106862253	106863799	+	106863320	106863799	A5SS&ES	0.5	50	50	ENSMUST00000137995.8	ENSMUSG00000086390.8	1810019D21Rik	chr8	lncRNA	RIKEN cDNA 1810019D21 gene
chr8	106887311	106887716	+	106887311	106887841	A3SS	0.5	50	50	ENSMUST00000212963.2	ENSMUSG00000031903.8	Pla2g15	chr8	protein_coding	phospholipase A2, group XV
chr8	106885188	106886795	+	106881656	106886795	A5SS	0.5	50	50	ENSMUST00000212963.2	ENSMUSG00000031903.8	Pla2g15	chr8	protein_coding	phospholipase A2, group XV
chr8	106895586	106916249	+	106895586;106906292	106905734;106916249	ES	0.33	50	50	ENSMUST00000034378.5	ENSMUSG00000031904.6	Slc7a6	chr8	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 6
chr8	106916374	106919067	+	106916374	106918971	A3SS	0.5	50	50	ENSMUST00000034378.5	ENSMUSG00000031904.6	Slc7a6	chr8	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 6
chr8	106895768	106905734	+	106895586	106905734	A5SS	0.25	50	50	ENSMUST00000034378.5	ENSMUSG00000031904.6	Slc7a6	chr8	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 6
chr8	106895832	106905734	+	106895586	106905734	A5SS	0.25	50	50	ENSMUST00000034378.5	ENSMUSG00000031904.6	Slc7a6	chr8	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 6
chr8	106905039	106905734	+	106895586	106905734	A5SS	0.25	50	50	ENSMUST00000034378.5	ENSMUSG00000031904.6	Slc7a6	chr8	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 6
chr8	106905919	106916249	+	106906292	106916249	A5SS	0.33	50	50	ENSMUST00000034378.5	ENSMUSG00000031904.6	Slc7a6	chr8	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 6
chr8	106905919	106916249	+	106905919;106906292	106906119;106916249	ES	0.33	50	50	ENSMUST00000212377.2	ENSMUSG00000031904.6	Slc7a6	chr8	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 6
chr8	106895586;106905919	106905734;106916249	+	106895586	106916249	cassetteExon	0.5	100	100	ENSMUST00000212421.2	ENSMUSG00000031904.6	Slc7a6	chr8	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 6
chr8	106906292	106916249	+	106895586	106916249	A5SS	0.33	50	50	ENSMUST00000212421.2	ENSMUSG00000031904.6	Slc7a6	chr8	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 6
chr8	106895832	106905734	+	106895768	106905734	A5SS	0.25	50	50	ENSMUST00000211824.2	ENSMUSG00000031904.6	Slc7a6	chr8	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 6
chr8	106905039	106905734	+	106895768	106905734	A5SS	0.25	50	50	ENSMUST00000211824.2	ENSMUSG00000031904.6	Slc7a6	chr8	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 6
chr8	106905039	106905734	+	106895832	106905734	A5SS	0.25	50	50	ENSMUST00000212837.2	ENSMUSG00000031904.6	Slc7a6	chr8	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 6
chr8	106931172	106937351	-	106931172;106937263	106936997;106937351	ES	0.5	50	50	ENSMUST00000035925.7	ENSMUSG00000033106.7	Slc7a6os	chr8	protein_coding	solute carrier family 7, member 6 opposite strand
chr8	106931172	106937351	-	106937263	106937351	3pMXE	0.5	50	50	ENSMUST00000212397.2	ENSMUSG00000033106.7	Slc7a6os	chr8	protein_coding	solute carrier family 7, member 6 opposite strand
chr8	106938154	106939008	+	106937714	106939008	A5SS	0.5	50	50	ENSMUST00000071592.12	ENSMUSG00000060098.12	Prmt7	chr8	protein_coding	protein arginine N-methyltransferase 7
chr8	106964589	106967818	+	106964034	106967818	A5SS	0.5	50	50	ENSMUST00000071592.12	ENSMUSG00000060098.12	Prmt7	chr8	protein_coding	protein arginine N-methyltransferase 7
chr8	106992756	107007527	-	106992756	107014765	A5SS	0.5	50	50	ENSMUST00000067512.8	ENSMUSG00000031906.10	Smpd3	chr8	protein_coding	sphingomyelin phosphodiesterase 3, neutral
chr8	107142402	107145629	+	107142402	107145703	A3SS	0.5	50	50	ENSMUST00000213045.2	ENSMUSG00000031907.10	Zfp90	chr8	protein_coding	zinc finger protein 90
chr8	107145829	107146147	+	107145829	107146053	A3SS	0.5	50	50	ENSMUST00000213045.2	ENSMUSG00000031907.10	Zfp90	chr8	protein_coding	zinc finger protein 90
chr8	107146242	107150489	+	107146242	107150545	A3SS	0.5	50	50	ENSMUST00000213045.2	ENSMUSG00000031907.10	Zfp90	chr8	protein_coding	zinc finger protein 90
chr8	107426879	107431572	+	107426879	107443241	A3SS	0.5	50	50	ENSMUST00000048359.5	ENSMUSG00000041949.7	Tango6	chr8	protein_coding	transport and golgi organization 6
chr8	107603625	107610847	+	107603625	107604537	3pMXE	0.5	50	50	ENSMUST00000034385.12	ENSMUSG00000031910.15	Has3	chr8	protein_coding	hyaluronan synthase 3
chr8	107597583	107600540	+	107597046	107600540	A5SS	0.5	50	50	ENSMUST00000034385.12	ENSMUSG00000031910.15	Has3	chr8	protein_coding	hyaluronan synthase 3
chr8	107613158	107613933	-	107613158;107613669	107613552;107613933	ES	0.33	50	50	ENSMUST00000177068.8	ENSMUSG00000046691.15	Chtf8	chr8	protein_coding	CTF8, chromosome transmission fidelity factor 8
chr8	107613669	107620133	-	107613669;107613988	107613933;107620133	ES	0.33	50	50	ENSMUST00000177068.8	ENSMUSG00000046691.15	Chtf8	chr8	protein_coding	CTF8, chromosome transmission fidelity factor 8
chr8	107613683	107613933	-	107613669	107613933	A3SS	0.33	50	50	ENSMUST00000177068.8	ENSMUSG00000046691.15	Chtf8	chr8	protein_coding	CTF8, chromosome transmission fidelity factor 8
chr8	107613988	107619765	-	107613988	107620133	A5SS	0.5	50	50	ENSMUST00000177068.8	ENSMUSG00000046691.15	Chtf8	chr8	protein_coding	CTF8, chromosome transmission fidelity factor 8
chr8	107613158	107620133	-	107613158;107613669	107613552;107620133	ES	0.33	50	50	ENSMUST00000176090.2	ENSMUSG00000046691.15	Chtf8	chr8	protein_coding	CTF8, chromosome transmission fidelity factor 8
chr8	107613158;107613988	107613933;107620133	-	107613158;107613669	107613552;107620133	MXE	0.5	100	100	ENSMUST00000176090.2	ENSMUSG00000046691.15	Chtf8	chr8	protein_coding	CTF8, chromosome transmission fidelity factor 8
chr8	107613158	107613933	-	107613158;107613683	107613552;107613933	ES	0.33	50	50	ENSMUST00000176515.2	ENSMUSG00000046691.15	Chtf8	chr8	protein_coding	CTF8, chromosome transmission fidelity factor 8
chr8	107613669	107620133	-	107613988	107620133	A3SS&ES	0.33	50	50	ENSMUST00000176515.2	ENSMUSG00000046691.15	Chtf8	chr8	protein_coding	CTF8, chromosome transmission fidelity factor 8
chr8	107613158;107613988	107613552;107620133	-	107613158	107620133	cassetteExon	0.5	100	100	ENSMUST00000169312.2	ENSMUSG00000117748.2	Derpc	chr8	protein_coding	DERPC proline and glycine rich nuclear protein
chr8	107613158;107613988	107613933;107620133	-	107613158	107620133	cassetteExon	0.5	100	100	ENSMUST00000169312.2	ENSMUSG00000117748.2	Derpc	chr8	protein_coding	DERPC proline and glycine rich nuclear protein
chr8	107620344	107621223	+	107620604	107621223	A5SS	0.5	50	50	ENSMUST00000212272.2	ENSMUSG00000041438.9	Utp4	chr8	protein_coding	UTP4 small subunit processome component
chr8	107728338	107737924	+	107728338;107736597	107736413;107737924	ES	0.5	50	50	ENSMUST00000212524.2	ENSMUSG00000041308.7	Sntb2	chr8	protein_coding	syntrophin, basic 2
chr8	107773903	107775415	-	107773903	107774693	5pMXE	0.5	50	50	ENSMUST00000055316.10	ENSMUSG00000078931.5	Pdf	chr8	protein_coding	peptide deformylase (mitochondrial)
chr8	107780861	107782760	-	107780861	107782893	A5SS	0.5	50	50	ENSMUST00000095517.12	ENSMUSG00000031916.18	Cog8	chr8	protein_coding	component of oligomeric golgi complex 8
chr8	107784043	107785009	+	107784043;107784819	107784679;107785009	ES	0.5	50	50	ENSMUST00000034392.13	ENSMUSG00000031917.13	Nip7	chr8	protein_coding	NIP7, nucleolar pre-rRNA processing protein
chr8	107784043	107785009	+	107784043	107784679	3pMXE	0.5	50	50	ENSMUST00000212281.2	ENSMUSG00000031917.13	Nip7	chr8	protein_coding	NIP7, nucleolar pre-rRNA processing protein
chr8	107806101;107806426	107806327;107807725	-	107806101	107807725	cassetteExon	0.5	100	100	ENSMUST00000133925.8	ENSMUSG00000031921.18	Terf2	chr8	protein_coding	telomeric repeat binding factor 2
chr8	107803631	107806001	-	107803628	107806001	A3SS	0.5	50	50	ENSMUST00000133925.8	ENSMUSG00000031921.18	Terf2	chr8	protein_coding	telomeric repeat binding factor 2
chr8	107799277	107799354	-	107799277	107803242	A5SS	0.33	50	50	ENSMUST00000133925.8	ENSMUSG00000031921.18	Terf2	chr8	protein_coding	telomeric repeat binding factor 2
chr8	107799277	107803511	-	107799277	107803242	A5SS	0.33	50	50	ENSMUST00000133925.8	ENSMUSG00000031921.18	Terf2	chr8	protein_coding	telomeric repeat binding factor 2
chr8	107799277;107799430	107799354;107803511	-	107799277	107803511	cassetteExon	0.5	100	100	ENSMUST00000142616.8	ENSMUSG00000031921.18	Terf2	chr8	protein_coding	telomeric repeat binding factor 2
chr8	107892604	107896443	+	107877505	107896443	A5SS	0.5	50	50	ENSMUST00000034400.5	ENSMUSG00000031924.5	Cyb5b	chr8	protein_coding	cytochrome b5 type B
chr8	108020530	108051271	+	108020530;108022266	108022213;108051271	ES	0.5	50	50	ENSMUST00000151582.2	ENSMUSG00000003847.17	Nfat5	chr8	protein_coding	nuclear factor of activated T cells 5
chr8	108051396	108065441	+	108051396;108064988	108064927;108065441	ES	0.5	50	50	ENSMUST00000154474.8	ENSMUSG00000003847.17	Nfat5	chr8	protein_coding	nuclear factor of activated T cells 5
chr8	108074489	108082147	+	108074489;108078231	108078059;108082147	ES	0.5	50	50	ENSMUST00000154474.8	ENSMUSG00000003847.17	Nfat5	chr8	protein_coding	nuclear factor of activated T cells 5
chr8	108085398	108088379	+	108085398	108088376	A3SS	0.5	50	50	ENSMUST00000154474.8	ENSMUSG00000003847.17	Nfat5	chr8	protein_coding	nuclear factor of activated T cells 5
chr8	108142882	108145332	-	108145074	108145332	A3SS&ES	0.5	50	50	ENSMUST00000170796.8	ENSMUSG00000003848.15	Nob1	chr8	protein_coding	NIN1/RPN12 binding protein 1 homolog
chr8	108142882	108143626	-	108142882	108145332	A5SS	0.5	50	50	ENSMUST00000169311.8	ENSMUSG00000003848.15	Nob1	chr8	protein_coding	NIN1/RPN12 binding protein 1 homolog
chr8	108148244	108148680	-	108148244	108151370	A5SS	0.33	50	50	ENSMUST00000169311.8	ENSMUSG00000003848.15	Nob1	chr8	protein_coding	NIN1/RPN12 binding protein 1 homolog
chr8	108148244	108151384	-	108148244	108151370	A5SS	0.33	50	50	ENSMUST00000169311.8	ENSMUSG00000003848.15	Nob1	chr8	protein_coding	NIN1/RPN12 binding protein 1 homolog
chr8	108148244	108151384	-	108148244	108148680	5pMXE	0.33	50	50	ENSMUST00000076585.13	ENSMUSG00000003848.15	Nob1	chr8	protein_coding	NIN1/RPN12 binding protein 1 homolog
chr8	108184633	108212178	+	108184633;108210101	108209964;108212178	ES	0.5	50	50	ENSMUST00000166615.3	ENSMUSG00000031930.12	Wwp2	chr8	protein_coding	WW domain containing E3 ubiquitin protein ligase 2
chr8	108163073;108178259	108178220;108179611	+	108163073	108179611	cassetteExon	0.5	100	100	ENSMUST00000166615.3	ENSMUSG00000031930.12	Wwp2	chr8	protein_coding	WW domain containing E3 ubiquitin protein ligase 2
chr8	108229430	108232939	+	108212274	108232939	A5SS	0.5	50	50	ENSMUST00000166615.3	ENSMUSG00000031930.12	Wwp2	chr8	protein_coding	WW domain containing E3 ubiquitin protein ligase 2
chr8	108271978	108272076	+	108267430	108272076	A5SS	0.5	50	50	ENSMUST00000166615.3	ENSMUSG00000031930.12	Wwp2	chr8	protein_coding	WW domain containing E3 ubiquitin protein ligase 2
chr8	108184633	108212178	+	108184633	108209964	3pMXE	0.5	50	50	ENSMUST00000212645.2	ENSMUSG00000031930.12	Wwp2	chr8	protein_coding	WW domain containing E3 ubiquitin protein ligase 2
chr8	108184633	108212178	+	108210101	108212178	5pMXE	0.5	50	50	ENSMUST00000212063.2	ENSMUSG00000031930.12	Wwp2	chr8	protein_coding	WW domain containing E3 ubiquitin protein ligase 2
chr8	109430867	109526827	+	109430867;109521601	109518834;109526827	ES	0.5	50	50	ENSMUST00000220518.2	ENSMUSG00000038872.11	Zfhx3	chr8	protein_coding	zinc finger homeobox 3
chr8	109051929	109116657	+	109051929	109244278	A3SS	0.5	50	50	ENSMUST00000220518.2	ENSMUSG00000038872.11	Zfhx3	chr8	protein_coding	zinc finger homeobox 3
chr8	109401234	109403803	+	109401234	109430394	A3SS	0.5	50	50	ENSMUST00000220518.2	ENSMUSG00000038872.11	Zfhx3	chr8	protein_coding	zinc finger homeobox 3
chr8	108727414	108860049	+	108669332	108860049	A5SS	0.5	50	50	ENSMUST00000220518.2	ENSMUSG00000038872.11	Zfhx3	chr8	protein_coding	zinc finger homeobox 3
chr8	109339248	109400874	+	109371426	109400874	A5SS&ES	0.33	50	50	ENSMUST00000220518.2	ENSMUSG00000038872.11	Zfhx3	chr8	protein_coding	zinc finger homeobox 3
chr8	109364715	109400874	+	109371426	109400874	A5SS&ES	0.33	50	50	ENSMUST00000220518.2	ENSMUSG00000038872.11	Zfhx3	chr8	protein_coding	zinc finger homeobox 3
chr8	109441962	109518834	+	109430867	109518834	A5SS	0.5	50	50	ENSMUST00000220518.2	ENSMUSG00000038872.11	Zfhx3	chr8	protein_coding	zinc finger homeobox 3
chr8	108727414	108730580	+	108727414	108860049	A3SS	0.5	50	50	ENSMUST00000221632.2	ENSMUSG00000038872.11	Zfhx3	chr8	protein_coding	zinc finger homeobox 3
chr8	109364715	109400874	+	109339248	109400874	A5SS	0.33	50	50	ENSMUST00000221100.2	ENSMUSG00000038872.11	Zfhx3	chr8	protein_coding	zinc finger homeobox 3
chr8	109430867	109518834	+	109430867	109526827	A3SS	0.5	50	50	ENSMUST00000188994.2	ENSMUSG00000038872.11	Zfhx3	chr8	protein_coding	zinc finger homeobox 3
chr8	109521601	109526827	+	109430867	109526827	A5SS	0.5	50	50	ENSMUST00000188994.2	ENSMUSG00000038872.11	Zfhx3	chr8	protein_coding	zinc finger homeobox 3
chr8	109263466	109263667	-	109255416	109263667	A3SS	0.5	50	50	ENSMUST00000209663.2	ENSMUSG00000109868.2	Gm39244	chr8	lncRNA	predicted gene, 39244
chr8	109255416	109262878	-	109255416	109263667	A5SS	0.5	50	50	ENSMUST00000209663.2	ENSMUSG00000109868.2	Gm39244	chr8	lncRNA	predicted gene, 39244
chr8	109802376	109904325	+	109802376;109898678	109898453;109904325	ES	0.5	50	50	ENSMUST00000180524.8	ENSMUSG00000097393.9	D030068K23Rik	chr8	lncRNA	RIKEN cDNA D030068K23 gene
chr8	109976555	109992733	+	109976555	109977736	3pMXE	0.5	50	50	ENSMUST00000180524.8	ENSMUSG00000097393.9	D030068K23Rik	chr8	lncRNA	RIKEN cDNA D030068K23 gene
chr8	109905958;109946813	109946720;109949766	+	109905958	109949766	cassetteExon	0.5	100	100	ENSMUST00000180524.8	ENSMUSG00000097393.9	D030068K23Rik	chr8	lncRNA	RIKEN cDNA D030068K23 gene
chr8	109949811	109954130	+	109949811	109955781	A3SS	0.5	50	50	ENSMUST00000180524.8	ENSMUSG00000097393.9	D030068K23Rik	chr8	lncRNA	RIKEN cDNA D030068K23 gene
chr8	110221872	110226016	+	110221587	110226016	A5SS	0.5	50	50	ENSMUST00000034162.8	ENSMUSG00000031727.9	Pmfbp1	chr8	protein_coding	polyamine modulated factor 1 binding protein 1
chr8	110304194	110305089	-	110304194	110305642	A5SS	0.33	50	50	ENSMUST00000074898.8	ENSMUSG00000031722.11	Hp	chr8	protein_coding	haptoglobin
chr8	110304194	110305582	-	110304194	110305642	A5SS	0.33	50	50	ENSMUST00000074898.8	ENSMUSG00000031722.11	Hp	chr8	protein_coding	haptoglobin
chr8	110304194	110305089	-	110304194	110305582	A5SS	0.33	50	50	ENSMUST00000212918.2	ENSMUSG00000031722.11	Hp	chr8	protein_coding	haptoglobin
chr8	110328137	110329935	-	110328137;110328370	110328277;110329935	ES	0.33	50	50	ENSMUST00000133353.8	ENSMUSG00000031730.19	Dhodh	chr8	protein_coding	dihydroorotate dehydrogenase
chr8	110328370;110328846	110328783;110329935	-	110328370	110329935	cassetteExon	0.5	100	100	ENSMUST00000133353.8	ENSMUSG00000031730.19	Dhodh	chr8	protein_coding	dihydroorotate dehydrogenase
chr8	110328846	110329935	-	110328137	110329935	A3SS	0.33	50	50	ENSMUST00000123605.9	ENSMUSG00000031730.19	Dhodh	chr8	protein_coding	dihydroorotate dehydrogenase
chr8	110333052	110335172	-	110333052	110334984	A5SS	0.5	50	50	ENSMUST00000123605.9	ENSMUSG00000031730.19	Dhodh	chr8	protein_coding	dihydroorotate dehydrogenase
chr8	110320763;110321701	110321252;110322279	-	110320763	110322279	cassetteExon	0.5	100	100	ENSMUST00000143900.8	ENSMUSG00000031730.19	Dhodh	chr8	protein_coding	dihydroorotate dehydrogenase
chr8	110320763	110322279	-	110320763	110321252	5pMXE	0.5	50	50	ENSMUST00000124138.2	ENSMUSG00000031730.19	Dhodh	chr8	protein_coding	dihydroorotate dehydrogenase
chr8	110355444;110356877	110356788;110357687	+	110355444	110357687	cassetteExon	0.5	100	100	ENSMUST00000057344.3	ENSMUSG00000048827.13	Pkd1l3	chr8	protein_coding	polycystic kidney disease 1 like 3
chr8	110353514	110355328	+	110353514	110355268	A3SS	0.5	50	50	ENSMUST00000057344.3	ENSMUSG00000048827.13	Pkd1l3	chr8	protein_coding	polycystic kidney disease 1 like 3
chr8	110402056;110402434	110402275;110403390	-	110402056	110403390	cassetteExon	0.5	100	100	ENSMUST00000034164.6	ENSMUSG00000031729.7	Ist1	chr8	protein_coding	increased sodium tolerance 1 homolog (yeast)
chr8	110433051;110434776	110434661;110436043	+	110433051	110436043	cassetteExon	0.5	100	100	ENSMUST00000212964.2	ENSMUSG00000031728.11	Zfp821	chr8	protein_coding	zinc finger protein 821
chr8	110444519	110447827	+	110444538	110447827	A5SS	0.5	50	50	ENSMUST00000212964.2	ENSMUSG00000031728.11	Zfp821	chr8	protein_coding	zinc finger protein 821
chr8	110461995	110464263	-	110461995;110462157	110462092;110464263	ES	0.5	50	50	ENSMUST00000093162.4	ENSMUSG00000069895.5	Atxn1l	chr8	protein_coding	ataxin 1-like
chr8	110556307	110559349	+	110556307;110557253	110557245;110559349	ES	0.5	50	50	ENSMUST00000093157.13	ENSMUSG00000031731.17	Ap1g1	chr8	protein_coding	adaptor protein complex AP-1, gamma 1 subunit
chr8	110529782	110532105	+	110529782	110545550	A3SS	0.5	50	50	ENSMUST00000093157.13	ENSMUSG00000031731.17	Ap1g1	chr8	protein_coding	adaptor protein complex AP-1, gamma 1 subunit
chr8	110589355	110594928	-	110587961	110594928	A3SS	0.5	50	50	ENSMUST00000173980.2	ENSMUSG00000078143.4	Gm17344	chr8	lncRNA	predicted gene, 17344
chr8	110681373	110686345	-	110675294	110686345	A3SS	0.5	50	50	ENSMUST00000001722.14	ENSMUSG00000001672.15	Marveld3	chr8	protein_coding	MARVEL (membrane-associating) domain containing 3
chr8	110717182	110718105	+	110717152	110718105	A5SS	0.5	50	50	ENSMUST00000001720.14	ENSMUSG00000001670.14	Tat	chr8	protein_coding	tyrosine aminotransferase
chr8	110757613	110766056	-	110757613	110765874	5pMXE	0.33	50	50	ENSMUST00000109222.4	ENSMUSG00000035930.10	Chst4	chr8	protein_coding	carbohydrate sulfotransferase 4
chr8	110757613	110765945	-	110757613	110765874	A5SS	0.33	50	50	ENSMUST00000109222.4	ENSMUSG00000035930.10	Chst4	chr8	protein_coding	carbohydrate sulfotransferase 4
chr8	110757613	110765945	-	110757613	110766056	A5SS	0.33	50	50	ENSMUST00000211894.2	ENSMUSG00000035930.10	Chst4	chr8	protein_coding	carbohydrate sulfotransferase 4
chr8	110809374	110810239	+	110809374	110810289	A3SS	0.5	50	50	ENSMUST00000212754.2	ENSMUSG00000044676.11	Zfp612	chr8	protein_coding	zinc finger protein 612
chr8	110869832	110872284	-	110864441	110872284	A3SS	0.5	50	50	ENSMUST00000212297.2	ENSMUSG00000003657.10	Calb2	chr8	protein_coding	calbindin 2
chr8	111171222	111172986	+	111146508	111172986	A5SS	0.5	50	50	ENSMUST00000043141.7	ENSMUSG00000059854.9	Hydin	chr8	protein_coding	HYDIN, axonemal central pair apparatus protein
chr8	111380309	111409124	+	111380309;111397814	111397658;111409124	ES	0.5	50	50	ENSMUST00000213003.2	ENSMUSG00000010936.12	Vac14	chr8	protein_coding	Vac14 homolog (S. cerevisiae)
chr8	111409256	111436954	+	111409256	111436950	A3SS	0.5	50	50	ENSMUST00000213003.2	ENSMUSG00000010936.12	Vac14	chr8	protein_coding	Vac14 homolog (S. cerevisiae)
chr8	111439459	111440729	+	111439459	111442059	A3SS	0.5	50	50	ENSMUST00000213003.2	ENSMUSG00000010936.12	Vac14	chr8	protein_coding	Vac14 homolog (S. cerevisiae)
chr8	111359248	111360085	+	111359243	111360085	A5SS	0.5	50	50	ENSMUST00000213003.2	ENSMUSG00000010936.12	Vac14	chr8	protein_coding	Vac14 homolog (S. cerevisiae)
chr8	111437124	111438225	+	111437188	111438225	A5SS	0.5	50	50	ENSMUST00000213003.2	ENSMUSG00000010936.12	Vac14	chr8	protein_coding	Vac14 homolog (S. cerevisiae)
chr8	111456752	111458594	+	111456752	111458690	A3SS	0.5	50	50	ENSMUST00000052457.15	ENSMUSG00000033763.15	Mtss2	chr8	protein_coding	MTSS I-BAR domain containing 2
chr8	111458810	111463775	+	111458810	111463778	A3SS	0.5	50	50	ENSMUST00000052457.15	ENSMUSG00000033763.15	Mtss2	chr8	protein_coding	MTSS I-BAR domain containing 2
chr8	111452645	111452826	+	111448422	111452826	A5SS	0.5	50	50	ENSMUST00000052457.15	ENSMUSG00000033763.15	Mtss2	chr8	protein_coding	MTSS I-BAR domain containing 2
chr8	111469411	111474875	-	111469411;111473567	111473450;111474875	ES	0.5	50	50	ENSMUST00000150680.2	ENSMUSG00000031750.16	Il34	chr8	protein_coding	interleukin 34
chr8	111482282	111517421	-	111482282	111532366	A5SS	0.33	50	50	ENSMUST00000150680.2	ENSMUSG00000031750.16	Il34	chr8	protein_coding	interleukin 34
chr8	111482282	111532374	-	111482282	111532366	A5SS	0.33	50	50	ENSMUST00000150680.2	ENSMUSG00000031750.16	Il34	chr8	protein_coding	interleukin 34
chr8	111482282	111532374	-	111482282	111517421	5pMXE	0.33	50	50	ENSMUST00000148732.2	ENSMUSG00000031750.16	Il34	chr8	protein_coding	interleukin 34
chr8	111576582	111578918	+	111576582;111578082	111577968;111578918	ES	0.5	50	50	ENSMUST00000165867.8	ENSMUSG00000031753.17	Cog4	chr8	protein_coding	component of oligomeric golgi complex 4
chr8	111578082	111580302	+	111578082;111579092	111578918;111580302	ES	0.5	50	50	ENSMUST00000165867.8	ENSMUSG00000031753.17	Cog4	chr8	protein_coding	component of oligomeric golgi complex 4
chr8	111590016	111593193	+	111590016;111592727	111592609;111593193	ES	0.5	50	50	ENSMUST00000165867.8	ENSMUSG00000031753.17	Cog4	chr8	protein_coding	component of oligomeric golgi complex 4
chr8	111594999	111605638	+	111594999;111600840	111600778;111605638	ES	0.5	50	50	ENSMUST00000165867.8	ENSMUSG00000031753.17	Cog4	chr8	protein_coding	component of oligomeric golgi complex 4
chr8	111576582	111578034	+	111576582	111577968	A3SS	0.33	50	50	ENSMUST00000165867.8	ENSMUSG00000031753.17	Cog4	chr8	protein_coding	component of oligomeric golgi complex 4
chr8	111593359	111594886	+	111593359	111594834	A3SS	0.5	50	50	ENSMUST00000165867.8	ENSMUSG00000031753.17	Cog4	chr8	protein_coding	component of oligomeric golgi complex 4
chr8	111573841	111576500	+	111573444	111576500	A5SS	0.5	50	50	ENSMUST00000165867.8	ENSMUSG00000031753.17	Cog4	chr8	protein_coding	component of oligomeric golgi complex 4
chr8	111573841	111577968	+	111576582	111577968	A5SS&ES	0.33	50	50	ENSMUST00000165867.8	ENSMUSG00000031753.17	Cog4	chr8	protein_coding	component of oligomeric golgi complex 4
chr8	111576554	111577968	+	111576582	111577968	A5SS	0.33	50	50	ENSMUST00000165867.8	ENSMUSG00000031753.17	Cog4	chr8	protein_coding	component of oligomeric golgi complex 4
chr8	111573841	111577968	+	111573841;111576554	111576500;111577968	ES	0.33	50	50	ENSMUST00000174165.8	ENSMUSG00000031753.17	Cog4	chr8	protein_coding	component of oligomeric golgi complex 4
chr8	111576582	111578918	+	111578082	111578918	A5SS&ES	0.5	50	50	ENSMUST00000174165.8	ENSMUSG00000031753.17	Cog4	chr8	protein_coding	component of oligomeric golgi complex 4
chr8	111576582	111578918	+	111576582;111578082	111578034;111578918	ES	0.5	50	50	ENSMUST00000172668.8	ENSMUSG00000031753.17	Cog4	chr8	protein_coding	component of oligomeric golgi complex 4
chr8	111578082	111580302	+	111578082	111578918	3pMXE	0.5	50	50	ENSMUST00000172668.8	ENSMUSG00000031753.17	Cog4	chr8	protein_coding	component of oligomeric golgi complex 4
chr8	111573841	111577968	+	111573841	111576500	A3SS&ES	0.5	50	50	ENSMUST00000172668.8	ENSMUSG00000031753.17	Cog4	chr8	protein_coding	component of oligomeric golgi complex 4
chr8	111573841	111577968	+	111573841;111576582	111576500;111577968	ES	0.33	50	50	ENSMUST00000034203.17	ENSMUSG00000031753.17	Cog4	chr8	protein_coding	component of oligomeric golgi complex 4
chr8	111573841;111578082	111577968;111578918	+	111573841;111576582	111576500;111578918	MXE	0.5	100	100	ENSMUST00000174723.8	ENSMUSG00000031753.17	Cog4	chr8	protein_coding	component of oligomeric golgi complex 4
chr8	111573841;111578082	111577968;111580302	+	111573841;111579092	111576500;111580302	MXE	0.5	100	100	ENSMUST00000174723.8	ENSMUSG00000031753.17	Cog4	chr8	protein_coding	component of oligomeric golgi complex 4
chr8	111576582;111578082	111577968;111580302	+	111576582;111579092	111578918;111580302	MXE	0.5	100	100	ENSMUST00000174723.8	ENSMUSG00000031753.17	Cog4	chr8	protein_coding	component of oligomeric golgi complex 4
chr8	111576582;111578082	111578034;111580302	+	111576582;111579092	111578918;111580302	MXE	0.5	100	100	ENSMUST00000174723.8	ENSMUSG00000031753.17	Cog4	chr8	protein_coding	component of oligomeric golgi complex 4
chr8	111616372	111616808	-	111616470	111616808	A3SS	0.5	50	50	ENSMUST00000212971.2	ENSMUSG00000033703.10	Fcsk	chr8	protein_coding	fucose kinase
chr8	111646737;111648243	111648041;111683390	+	111646737	111683390	cassetteExon	0.5	100	100	ENSMUST00000117534.8	ENSMUSG00000031749.13	St3gal2	chr8	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 2
chr8	111658637	111683390	+	111646737	111683390	A5SS	0.25	50	50	ENSMUST00000117534.8	ENSMUSG00000031749.13	St3gal2	chr8	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 2
chr8	111667732	111683390	+	111646737	111683390	A5SS	0.25	50	50	ENSMUST00000117534.8	ENSMUSG00000031749.13	St3gal2	chr8	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 2
chr8	111658637	111683390	+	111648243	111683390	A5SS	0.25	50	50	ENSMUST00000129639.2	ENSMUSG00000031749.13	St3gal2	chr8	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 2
chr8	111667732	111683390	+	111648243	111683390	A5SS	0.25	50	50	ENSMUST00000129639.2	ENSMUSG00000031749.13	St3gal2	chr8	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 2
chr8	111667732	111683390	+	111658637	111683390	A5SS	0.25	50	50	ENSMUST00000141464.2	ENSMUSG00000031749.13	St3gal2	chr8	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 2
chr8	111750646	111758254	-	111750646	111754230	5pMXE	0.5	50	50	ENSMUST00000040241.15	ENSMUSG00000033658.17	Ddx19b	chr8	protein_coding	DEAD box helicase 19b
chr8	111760576	111763541	+	111760540	111763541	A5SS	0.33	50	50	ENSMUST00000125268.2	ENSMUSG00000031960.15	Aars	chr8	protein_coding	alanyl-tRNA synthetase
chr8	111760895	111763541	+	111760540	111763541	A5SS	0.33	50	50	ENSMUST00000125268.2	ENSMUSG00000031960.15	Aars	chr8	protein_coding	alanyl-tRNA synthetase
chr8	111760576	111763541	+	111760895	111763541	A5SS	0.33	50	50	ENSMUST00000034441.8	ENSMUSG00000031960.15	Aars	chr8	protein_coding	alanyl-tRNA synthetase
chr8	111787871	111790970	-	111787871;111789078	111788924;111790970	ES	0.5	50	50	ENSMUST00000190778.7	ENSMUSG00000033633.16	Clec18a	chr8	protein_coding	C-type lectin domain family 18, member A
chr8	111808369	111817047	-	111808369	111808661	5pMXE	0.5	50	50	ENSMUST00000190778.7	ENSMUSG00000033633.16	Clec18a	chr8	protein_coding	C-type lectin domain family 18, member A
chr8	111798378	111798618	-	111798317	111798618	A3SS	0.5	50	50	ENSMUST00000190778.7	ENSMUSG00000033633.16	Clec18a	chr8	protein_coding	C-type lectin domain family 18, member A
chr8	111807563	111808135	-	111807682	111808135	A3SS	0.5	50	50	ENSMUST00000190778.7	ENSMUSG00000033633.16	Clec18a	chr8	protein_coding	C-type lectin domain family 18, member A
chr8	111808340	111808661	-	111808369	111808661	A3SS	0.5	50	50	ENSMUST00000190778.7	ENSMUSG00000033633.16	Clec18a	chr8	protein_coding	C-type lectin domain family 18, member A
chr8	111821458	111828446	+	111821458	111828493	A3SS	0.5	50	50	ENSMUST00000135302.8	ENSMUSG00000033624.11	Pdpr	chr8	protein_coding	pyruvate dehydrogenase phosphatase regulatory subunit
chr8	111854969;111856103	111856025;111856238	+	111854969	111856238	cassetteExon	0.5	100	100	ENSMUST00000039333.10	ENSMUSG00000033624.11	Pdpr	chr8	protein_coding	pyruvate dehydrogenase phosphatase regulatory subunit
chr8	111864184;111870356	111870234;111872036	-	111864184	111872036	cassetteExon	0.5	100	100	ENSMUST00000127301.8	ENSMUSG00000084808.8	9430091E24Rik	chr8	lncRNA	RIKEN cDNA 9430091E24 gene
chr8	111926854	111985403	-	111926854;111928190	111928158;111985403	ES	0.5	50	50	ENSMUST00000169020.8	ENSMUSG00000003316.15	Glg1	chr8	protein_coding	golgi apparatus protein 1
chr8	111887442	111888058	-	111887373	111888058	A3SS	0.5	50	50	ENSMUST00000169020.8	ENSMUSG00000003316.15	Glg1	chr8	protein_coding	golgi apparatus protein 1
chr8	112011997	112014690	-	112010021	112014690	A3SS	0.5	50	50	ENSMUST00000038739.5	ENSMUSG00000033596.6	Rfwd3	chr8	protein_coding	ring finger and WD repeat domain 3
chr8	112038709	112041597	-	112038709	112041573	A5SS	0.5	50	50	ENSMUST00000056157.14	ENSMUSG00000012519.15	Mlkl	chr8	protein_coding	mixed lineage kinase domain-like
chr8	112042174	112042540	-	112042174	112042995	A5SS	0.5	50	50	ENSMUST00000056157.14	ENSMUSG00000012519.15	Mlkl	chr8	protein_coding	mixed lineage kinase domain-like
chr8	112073153;112073474	112073426;112074563	-	112073153	112074563	cassetteExon	0.5	100	100	ENSMUST00000159336.8	ENSMUSG00000033579.17	Fa2h	chr8	protein_coding	fatty acid 2-hydroxylase
chr8	112187544;112187886	112187833;112188788	-	112187544	112188788	cassetteExon	0.5	100	100	ENSMUST00000038193.15	ENSMUSG00000031959.16	Wdr59	chr8	protein_coding	WD repeat domain 59
chr8	112193554;112199318	112199262;112202676	-	112193554	112202676	cassetteExon	0.5	100	100	ENSMUST00000038193.15	ENSMUSG00000031959.16	Wdr59	chr8	protein_coding	WD repeat domain 59
chr8	112185678	112187215	-	112185681	112187215	A3SS	0.5	50	50	ENSMUST00000038193.15	ENSMUSG00000031959.16	Wdr59	chr8	protein_coding	WD repeat domain 59
chr8	112264196	112345838	+	112264196;112336020	112335925;112345838	ES	0.5	50	50	ENSMUST00000172856.8	ENSMUSG00000033545.15	Znrf1	chr8	protein_coding	zinc and ring finger 1
chr8	112264196;112333480	112333379;112335925	+	112264196	112335925	cassetteExon	0.5	100	100	ENSMUST00000172856.8	ENSMUSG00000033545.15	Znrf1	chr8	protein_coding	zinc and ring finger 1
chr8	112348319	112349107	+	112348319	112349431	A3SS	0.5	50	50	ENSMUST00000172856.8	ENSMUSG00000033545.15	Znrf1	chr8	protein_coding	zinc and ring finger 1
chr8	112264281	112335925	+	112264196	112335925	A5SS	0.2	50	50	ENSMUST00000172856.8	ENSMUSG00000033545.15	Znrf1	chr8	protein_coding	zinc and ring finger 1
chr8	112265098	112335925	+	112264196	112335925	A5SS	0.2	50	50	ENSMUST00000172856.8	ENSMUSG00000033545.15	Znrf1	chr8	protein_coding	zinc and ring finger 1
chr8	112267956	112335925	+	112264196	112335925	A5SS	0.2	50	50	ENSMUST00000172856.8	ENSMUSG00000033545.15	Znrf1	chr8	protein_coding	zinc and ring finger 1
chr8	112345861	112348228	+	112345943	112348228	A5SS	0.5	50	50	ENSMUST00000172856.8	ENSMUSG00000033545.15	Znrf1	chr8	protein_coding	zinc and ring finger 1
chr8	112264196	112333379	+	112264196	112345838	A3SS	0.33	50	50	ENSMUST00000171182.8	ENSMUSG00000033545.15	Znrf1	chr8	protein_coding	zinc and ring finger 1
chr8	112264281	112335925	+	112333480	112335925	A5SS&ES	0.2	50	50	ENSMUST00000174376.8	ENSMUSG00000033545.15	Znrf1	chr8	protein_coding	zinc and ring finger 1
chr8	112265098	112335925	+	112333480	112335925	A5SS&ES	0.2	50	50	ENSMUST00000174376.8	ENSMUSG00000033545.15	Znrf1	chr8	protein_coding	zinc and ring finger 1
chr8	112265335	112333379	+	112264196	112333379	A5SS	0.33	50	50	ENSMUST00000174376.8	ENSMUSG00000033545.15	Znrf1	chr8	protein_coding	zinc and ring finger 1
chr8	112267956	112335925	+	112333480	112335925	A5SS&ES	0.2	50	50	ENSMUST00000174376.8	ENSMUSG00000033545.15	Znrf1	chr8	protein_coding	zinc and ring finger 1
chr8	112288867	112333379	+	112264196	112333379	A5SS	0.33	50	50	ENSMUST00000174376.8	ENSMUSG00000033545.15	Znrf1	chr8	protein_coding	zinc and ring finger 1
chr8	112265098	112335925	+	112264281	112335925	A5SS	0.2	50	50	ENSMUST00000174454.8	ENSMUSG00000033545.15	Znrf1	chr8	protein_coding	zinc and ring finger 1
chr8	112267956	112335925	+	112264281	112335925	A5SS	0.2	50	50	ENSMUST00000174454.8	ENSMUSG00000033545.15	Znrf1	chr8	protein_coding	zinc and ring finger 1
chr8	112267956	112335925	+	112265098	112335925	A5SS	0.2	50	50	ENSMUST00000174333.8	ENSMUSG00000033545.15	Znrf1	chr8	protein_coding	zinc and ring finger 1
chr8	112288867	112333379	+	112265335	112333379	A5SS	0.33	50	50	ENSMUST00000173481.2	ENSMUSG00000033545.15	Znrf1	chr8	protein_coding	zinc and ring finger 1
chr8	112264196	112335925	+	112333480	112335925	5pMXE	0.2	50	50	ENSMUST00000173922.2	ENSMUSG00000033545.15	Znrf1	chr8	protein_coding	zinc and ring finger 1
chr8	112264196	112345838	+	112336020	112345838	5pMXE	0.5	50	50	ENSMUST00000173819.2	ENSMUSG00000033545.15	Znrf1	chr8	protein_coding	zinc and ring finger 1
chr8	112392836;112394470	112394364;112396123	+	112392836	112396123	cassetteExon	0.5	100	100	ENSMUST00000212072.2	ENSMUSG00000055835.11	Zfp1	chr8	protein_coding	zinc finger protein 1
chr8	112385073	112392710	+	112385073	112392693	A3SS	0.33	50	50	ENSMUST00000212072.2	ENSMUSG00000055835.11	Zfp1	chr8	protein_coding	zinc finger protein 1
chr8	112385073	112392752	+	112385073	112392693	A3SS	0.33	50	50	ENSMUST00000212072.2	ENSMUSG00000055835.11	Zfp1	chr8	protein_coding	zinc finger protein 1
chr8	112385073	112392752	+	112385073	112392710	A3SS	0.33	50	50	ENSMUST00000212206.2	ENSMUSG00000055835.11	Zfp1	chr8	protein_coding	zinc finger protein 1
chr8	112447963	112458671	-	112447963	112470321	A5SS	0.5	50	50	ENSMUST00000166232.4	ENSMUSG00000031955.11	Bcar1	chr8	protein_coding	breast cancer anti-estrogen resistance 1
chr8	112645588;112653557	112653478;112659992	-	112645588	112659992	cassetteExon	0.5	100	100	ENSMUST00000034429.9	ENSMUSG00000031951.9	Tmem231	chr8	protein_coding	transmembrane protein 231
chr8	112698794	112708794	-	112706076	112708794	A3SS&ES	0.5	50	50	ENSMUST00000034427.12	ENSMUSG00000031949.18	Adat1	chr8	protein_coding	adenosine deaminase, tRNA-specific 1
chr8	112732420	112737842	-	112732420;112735018	112734839;112737842	ES	0.2	50	50	ENSMUST00000093120.13	ENSMUSG00000031948.15	Kars	chr8	protein_coding	lysyl-tRNA synthetase
chr8	112735018;112735171	112735114;112737842	-	112735018	112737842	cassetteExon	0.5	100	100	ENSMUST00000093120.13	ENSMUSG00000031948.15	Kars	chr8	protein_coding	lysyl-tRNA synthetase
chr8	112736912	112737842	-	112735018	112737842	A3SS	0.2	50	50	ENSMUST00000093120.13	ENSMUSG00000031948.15	Kars	chr8	protein_coding	lysyl-tRNA synthetase
chr8	112735171;112736912	112736854;112737842	-	112735171	112737842	cassetteExon	0.5	100	100	ENSMUST00000164470.3	ENSMUSG00000031948.15	Kars	chr8	protein_coding	lysyl-tRNA synthetase
chr8	112730072	112737842	-	112730072;112732420	112732264;112737842	ES	0.2	50	50	ENSMUST00000034426.14	ENSMUSG00000031948.15	Kars	chr8	protein_coding	lysyl-tRNA synthetase
chr8	112732420;112735171	112734839;112737842	-	112732420	112737842	cassetteExon	0.5	100	100	ENSMUST00000034426.14	ENSMUSG00000031948.15	Kars	chr8	protein_coding	lysyl-tRNA synthetase
chr8	112736912	112737842	-	112732420	112737842	A3SS	0.2	50	50	ENSMUST00000034426.14	ENSMUSG00000031948.15	Kars	chr8	protein_coding	lysyl-tRNA synthetase
chr8	112735018	112737842	-	112730072	112737842	A3SS	0.2	50	50	ENSMUST00000211978.2	ENSMUSG00000031948.15	Kars	chr8	protein_coding	lysyl-tRNA synthetase
chr8	112735171	112737842	-	112730072	112737842	A3SS	0.2	50	50	ENSMUST00000211978.2	ENSMUSG00000031948.15	Kars	chr8	protein_coding	lysyl-tRNA synthetase
chr8	112736912	112737842	-	112730072	112737842	A3SS	0.2	50	50	ENSMUST00000211978.2	ENSMUSG00000031948.15	Kars	chr8	protein_coding	lysyl-tRNA synthetase
chr8	113512527	113517459	+	113512527	113529682	A3SS	0.5	50	50	ENSMUST00000125976.8	ENSMUSG00000031772.18	Cntnap4	chr8	protein_coding	contactin associated protein-like 4
chr8	113458201	113460045	+	113391932	113460045	A5SS	0.5	50	50	ENSMUST00000125976.8	ENSMUSG00000031772.18	Cntnap4	chr8	protein_coding	contactin associated protein-like 4
chr8	114369935	114378238	+	114369935;114376181	114376119;114378238	ES	0.5	50	50	ENSMUST00000095173.3	ENSMUSG00000033409.15	Syce1l	chr8	protein_coding	synaptonemal complex central element protein 1 like
chr8	114379509;114380471	114380408;114380664	+	114379509	114380664	cassetteExon	0.5	100	100	ENSMUST00000095173.3	ENSMUSG00000033409.15	Syce1l	chr8	protein_coding	synaptonemal complex central element protein 1 like
chr8	114464293	114469669	-	114464293;114465558	114465428;114469669	ES	0.5	50	50	ENSMUST00000093113.5	ENSMUSG00000053399.10	Adamts18	chr8	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18
chr8	114481291	114493678	-	114481291;114491005	114490852;114493678	ES	0.25	50	50	ENSMUST00000093113.5	ENSMUSG00000053399.10	Adamts18	chr8	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18
chr8	114502081	114571487	-	114502081;114504594	114504312;114571487	ES	0.5	50	50	ENSMUST00000093113.5	ENSMUSG00000053399.10	Adamts18	chr8	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18
chr8	114463460	114493678	-	114491005	114493678	A3SS&ES	0.25	50	50	ENSMUST00000093113.5	ENSMUSG00000053399.10	Adamts18	chr8	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18
chr8	114492831	114493678	-	114491005	114493678	A3SS	0.25	50	50	ENSMUST00000093113.5	ENSMUSG00000053399.10	Adamts18	chr8	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18
chr8	114499924	114501566	-	114499856	114501566	A3SS	0.5	50	50	ENSMUST00000093113.5	ENSMUSG00000053399.10	Adamts18	chr8	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18
chr8	114477881	114481201	-	114477881	114481196	A5SS	0.5	50	50	ENSMUST00000093113.5	ENSMUSG00000053399.10	Adamts18	chr8	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18
chr8	114502081	114504308	-	114502081	114504312	A5SS	0.33	50	50	ENSMUST00000093113.5	ENSMUSG00000053399.10	Adamts18	chr8	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18
chr8	114502081	114571487	-	114502081;114504594	114504308;114571487	ES	0.5	50	50	ENSMUST00000212665.2	ENSMUSG00000053399.10	Adamts18	chr8	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18
chr8	114463460	114493678	-	114481291	114493678	A3SS&ES	0.25	50	50	ENSMUST00000212665.2	ENSMUSG00000053399.10	Adamts18	chr8	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18
chr8	114492831	114493678	-	114481291	114493678	A3SS	0.25	50	50	ENSMUST00000212665.2	ENSMUSG00000053399.10	Adamts18	chr8	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18
chr8	114492831	114493678	-	114463460	114493678	A3SS	0.25	50	50	ENSMUST00000213076.2	ENSMUSG00000053399.10	Adamts18	chr8	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18
chr8	114860440	114874635	+	114860440;114863231	114863078;114874635	ES	0.5	50	50	ENSMUST00000073521.12	ENSMUSG00000031767.14	Nudt7	chr8	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 7
chr8	114862180	114863078	+	114860440	114863078	A5SS	0.5	50	50	ENSMUST00000073521.12	ENSMUSG00000031767.14	Nudt7	chr8	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 7
chr8	114874733	114878394	+	114874793	114878394	A5SS	0.5	50	50	ENSMUST00000073521.12	ENSMUSG00000031767.14	Nudt7	chr8	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 7
chr8	114860440	114874635	+	114863231	114874635	A5SS&ES	0.5	50	50	ENSMUST00000109109.8	ENSMUSG00000031767.14	Nudt7	chr8	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 7
chr8	114932687;114955062	114955026;114956946	+	114932687	114956946	cassetteExon	0.5	100	100	ENSMUST00000142591.2	ENSMUSG00000046844.7	Vat1l	chr8	protein_coding	vesicle amine transport protein 1 like
chr8	114932682	114956946	+	114932687	114956946	A5SS	0.33	50	50	ENSMUST00000142591.2	ENSMUSG00000046844.7	Vat1l	chr8	protein_coding	vesicle amine transport protein 1 like
chr8	114955062	114956946	+	114932682	114956946	A5SS	0.33	50	50	ENSMUST00000049509.7	ENSMUSG00000046844.7	Vat1l	chr8	protein_coding	vesicle amine transport protein 1 like
chr8	115438991;115860428	115860337;116078377	+	115438991	116078377	cassetteExon	0.5	100	100	ENSMUST00000004756.14	ENSMUSG00000004637.16	Wwox	chr8	protein_coding	WW domain-containing oxidoreductase
chr8	115175078	115177257	+	115175078	115215638	A3SS	0.33	50	50	ENSMUST00000004756.14	ENSMUSG00000004637.16	Wwox	chr8	protein_coding	WW domain-containing oxidoreductase
chr8	115175078	115199366	+	115175078	115215638	A3SS	0.33	50	50	ENSMUST00000004756.14	ENSMUSG00000004637.16	Wwox	chr8	protein_coding	WW domain-containing oxidoreductase
chr8	115215744	115240312	+	115215744	115406527	A3SS	0.5	50	50	ENSMUST00000004756.14	ENSMUSG00000004637.16	Wwox	chr8	protein_coding	WW domain-containing oxidoreductase
chr8	115438991	115444838	+	115438991	116078377	A3SS	0.2	50	50	ENSMUST00000004756.14	ENSMUSG00000004637.16	Wwox	chr8	protein_coding	WW domain-containing oxidoreductase
chr8	115438991	115601341	+	115438991	116078377	A3SS	0.2	50	50	ENSMUST00000004756.14	ENSMUSG00000004637.16	Wwox	chr8	protein_coding	WW domain-containing oxidoreductase
chr8	115438991	115745968	+	115438991	116078377	A3SS	0.2	50	50	ENSMUST00000004756.14	ENSMUSG00000004637.16	Wwox	chr8	protein_coding	WW domain-containing oxidoreductase
chr8	115335394	115406527	+	115215744	115406527	A5SS	0.5	50	50	ENSMUST00000004756.14	ENSMUSG00000004637.16	Wwox	chr8	protein_coding	WW domain-containing oxidoreductase
chr8	115438991	115601341	+	115438991	115444838	3pMXE	0.2	50	50	ENSMUST00000160862.8	ENSMUSG00000004637.16	Wwox	chr8	protein_coding	WW domain-containing oxidoreductase
chr8	115438991	115745968	+	115438991	115444838	3pMXE	0.2	50	50	ENSMUST00000160862.8	ENSMUSG00000004637.16	Wwox	chr8	protein_coding	WW domain-containing oxidoreductase
chr8	115438991	115860337	+	115438991	115444838	3pMXE	0.2	50	50	ENSMUST00000160862.8	ENSMUSG00000004637.16	Wwox	chr8	protein_coding	WW domain-containing oxidoreductase
chr8	115438991	115745968	+	115438991	115601341	3pMXE	0.2	50	50	ENSMUST00000109108.9	ENSMUSG00000004637.16	Wwox	chr8	protein_coding	WW domain-containing oxidoreductase
chr8	115438991	115860337	+	115438991	115601341	3pMXE	0.2	50	50	ENSMUST00000109108.9	ENSMUSG00000004637.16	Wwox	chr8	protein_coding	WW domain-containing oxidoreductase
chr8	115175078	115199366	+	115175078	115177257	3pMXE	0.33	50	50	ENSMUST00000160005.2	ENSMUSG00000004637.16	Wwox	chr8	protein_coding	WW domain-containing oxidoreductase
chr8	115438991	115860337	+	115438991	115745968	3pMXE	0.2	50	50	ENSMUST00000159870.2	ENSMUSG00000004637.16	Wwox	chr8	protein_coding	WW domain-containing oxidoreductase
chr8	117241704	117242419	+	117241704	117242448	A3SS	0.5	50	50	ENSMUST00000213007.2	ENSMUSG00000034467.8	Dynlrb2	chr8	protein_coding	dynein light chain roadblock-type 2
chr8	117616598	117637823	-	117616598	117620827	5pMXE	0.33	50	50	ENSMUST00000155260.2	ENSMUSG00000014633.16	Cmc2	chr8	protein_coding	COX assembly mitochondrial protein 2
chr8	117616598	117637867	-	117616598	117620827	5pMXE	0.33	50	50	ENSMUST00000155260.2	ENSMUSG00000014633.16	Cmc2	chr8	protein_coding	COX assembly mitochondrial protein 2
chr8	117616598	117637867	-	117616598;117620898	117620827;117637867	ES	0.33	50	50	ENSMUST00000148235.8	ENSMUSG00000014633.16	Cmc2	chr8	protein_coding	COX assembly mitochondrial protein 2
chr8	117620898	117648090	-	117620898;117637973	117637867;117648090	ES	0.5	50	50	ENSMUST00000148235.8	ENSMUSG00000014633.16	Cmc2	chr8	protein_coding	COX assembly mitochondrial protein 2
chr8	117620898;117623253	117623079;117637867	-	117620898	117637867	cassetteExon	0.5	100	100	ENSMUST00000148235.8	ENSMUSG00000014633.16	Cmc2	chr8	protein_coding	COX assembly mitochondrial protein 2
chr8	117620898	117637823	-	117620898	117637867	A5SS	0.25	50	50	ENSMUST00000148235.8	ENSMUSG00000014633.16	Cmc2	chr8	protein_coding	COX assembly mitochondrial protein 2
chr8	117616598	117637823	-	117616598;117620898	117620827;117637823	ES	0.5	50	50	ENSMUST00000131616.8	ENSMUSG00000014633.16	Cmc2	chr8	protein_coding	COX assembly mitochondrial protein 2
chr8	117620898	117648090	-	117620898;117637973	117637823;117648090	ES	0.5	50	50	ENSMUST00000131616.8	ENSMUSG00000014633.16	Cmc2	chr8	protein_coding	COX assembly mitochondrial protein 2
chr8	117620898	117623079	-	117620898	117637823	A5SS	0.25	50	50	ENSMUST00000131616.8	ENSMUSG00000014633.16	Cmc2	chr8	protein_coding	COX assembly mitochondrial protein 2
chr8	117616598;117620898	117620827;117648090	-	117616598;117637973	117637867;117648090	MXE	0.5	100	100	ENSMUST00000078589.7	ENSMUSG00000014633.16	Cmc2	chr8	protein_coding	COX assembly mitochondrial protein 2
chr8	117623253	117637867	-	117616598	117637867	A3SS	0.33	50	50	ENSMUST00000078589.7	ENSMUSG00000014633.16	Cmc2	chr8	protein_coding	COX assembly mitochondrial protein 2
chr8	117616598	117637823	-	117616598	117637867	A5SS	0.33	50	50	ENSMUST00000078589.7	ENSMUSG00000014633.16	Cmc2	chr8	protein_coding	COX assembly mitochondrial protein 2
chr8	117616598;117637973	117637823;117648090	-	117616598;117620898	117620827;117648090	MXE	0.5	100	100	ENSMUST00000134356.2	ENSMUSG00000014633.16	Cmc2	chr8	protein_coding	COX assembly mitochondrial protein 2
chr8	117620898	117623079	-	117620898	117648090	A5SS	0.25	50	50	ENSMUST00000134356.2	ENSMUSG00000014633.16	Cmc2	chr8	protein_coding	COX assembly mitochondrial protein 2
chr8	117653001	117657817	+	117653001;117655320	117655275;117657817	ES	0.5	50	50	ENSMUST00000034205.5	ENSMUSG00000031756.6	Cenpn	chr8	protein_coding	centromere protein N
chr8	117658409	117659531	+	117658409	117660026	A3SS	0.5	50	50	ENSMUST00000034205.5	ENSMUSG00000031756.6	Cenpn	chr8	protein_coding	centromere protein N
chr8	117700438	117705514	-	117700438	117705518	A5SS	0.5	50	50	ENSMUST00000070577.7	ENSMUSG00000031847.9	1700030J22Rik	chr8	protein_coding	RIKEN cDNA 1700030J22 gene
chr8	117715942	117717965	-	117715942	117720027	A5SS	0.5	50	50	ENSMUST00000040484.6	ENSMUSG00000034424.6	Gcsh	chr8	protein_coding	glycine cleavage system protein H (aminomethyl carrier)
chr8	117743742	117747779	-	117743742;117746281	117746144;117747779	ES	0.5	50	50	ENSMUST00000109093.9	ENSMUSG00000034416.19	Pkd1l2	chr8	protein_coding	polycystic kidney disease 1 like 2
chr8	117772926	117774118	-	117772926	117774115	A5SS	0.5	50	50	ENSMUST00000109093.9	ENSMUSG00000034416.19	Pkd1l2	chr8	protein_coding	polycystic kidney disease 1 like 2
chr8	117857448;117857995	117857791;117859713	+	117857448	117859713	cassetteExon	0.5	100	100	ENSMUST00000034308.16	ENSMUSG00000031845.17	Bco1	chr8	protein_coding	beta-carotene oxygenase 1
chr8	118076114	118103814	+	117984140	118103814	A5SS	0.5	50	50	ENSMUST00000166750.9	ENSMUSG00000034390.17	Cmip	chr8	protein_coding	c-Maf inducing protein
chr8	118391819	118400339	-	118391819	118397948	5pMXE	0.5	50	50	ENSMUST00000037955.14	ENSMUSG00000034308.14	Sdr42e1	chr8	protein_coding	short chain dehydrogenase/reductase family 42E, member 1
chr8	118391819;118398082	118397948;118400339	-	118391819	118400339	cassetteExon	0.5	100	100	ENSMUST00000173522.8	ENSMUSG00000034308.14	Sdr42e1	chr8	protein_coding	short chain dehydrogenase/reductase family 42E, member 1
chr8	118414394	118416674	+	118414394;118415996	118415910;118416674	ES	0.5	50	50	ENSMUST00000209648.2	ENSMUSG00000110151.3	Gm38416	chr8	lncRNA	predicted gene, 38416
chr8	118429002	118434139	+	118429002	118461233	A3SS	0.5	50	50	ENSMUST00000034304.9	ENSMUSG00000031844.9	Hsd17b2	chr8	protein_coding	hydroxysteroid (17-beta) dehydrogenase 2
chr8	118447767	118461233	+	118429002	118461233	A5SS	0.5	50	50	ENSMUST00000034304.9	ENSMUSG00000031844.9	Hsd17b2	chr8	protein_coding	hydroxysteroid (17-beta) dehydrogenase 2
chr8	119484223;119514534	119514348;119578458	+	119484223	119578458	cassetteExon	0.5	100	100	ENSMUST00000117160.2	ENSMUSG00000031841.20	Cdh13	chr8	protein_coding	cadherin 13
chr8	119578610	119582106	+	119578610	119694788	A3SS	0.5	50	50	ENSMUST00000117160.2	ENSMUSG00000031841.20	Cdh13	chr8	protein_coding	cadherin 13
chr8	119044750	119232343	+	119010637	119232343	A5SS	0.5	50	50	ENSMUST00000117160.2	ENSMUSG00000031841.20	Cdh13	chr8	protein_coding	cadherin 13
chr8	119878292	119925594	+	119822102	119925594	A5SS	0.5	50	50	ENSMUST00000117160.2	ENSMUSG00000031841.20	Cdh13	chr8	protein_coding	cadherin 13
chr8	120004248	120015325	+	119969182	120015325	A5SS	0.5	50	50	ENSMUST00000117160.2	ENSMUSG00000031841.20	Cdh13	chr8	protein_coding	cadherin 13
chr8	120072472;120073606	120073564;120074775	+	120072472	120074775	cassetteExon	0.5	100	100	ENSMUST00000034300.8	ENSMUSG00000031839.8	Hsbp1	chr8	protein_coding	heat shock factor binding protein 1
chr8	120168241	120169655	+	120168241;120169308	120169172;120169655	ES	0.5	50	50	ENSMUST00000131448.8	ENSMUSG00000074063.11	Osgin1	chr8	protein_coding	oxidative stress induced growth inhibitor 1
chr8	120168241	120169238	+	120168241	120169172	A3SS	0.33	50	50	ENSMUST00000131448.8	ENSMUSG00000074063.11	Osgin1	chr8	protein_coding	oxidative stress induced growth inhibitor 1
chr8	120170022	120171698	+	120170022	120171696	A3SS	0.5	50	50	ENSMUST00000152420.8	ENSMUSG00000074063.11	Osgin1	chr8	protein_coding	oxidative stress induced growth inhibitor 1
chr8	120168241;120169308	120169238;120169655	+	120168241	120169655	cassetteExon	0.5	100	100	ENSMUST00000126414.8	ENSMUSG00000074063.11	Osgin1	chr8	protein_coding	oxidative stress induced growth inhibitor 1
chr8	120168241	120169655	+	120168241	120169172	A3SS	0.33	50	50	ENSMUST00000145604.8	ENSMUSG00000074063.11	Osgin1	chr8	protein_coding	oxidative stress induced growth inhibitor 1
chr8	120179877	120180940	+	120178929	120180940	A5SS	0.5	50	50	ENSMUST00000098363.10	ENSMUSG00000031837.15	Necab2	chr8	protein_coding	N-terminal EF-hand calcium binding protein 2
chr8	120227978	120228263	-	120227930	120228263	A3SS	0.5	50	50	ENSMUST00000036748.15	ENSMUSG00000034224.15	Slc38a8	chr8	protein_coding	solute carrier family 38, member 8
chr8	120222932	120223552	-	120222932	120226400	A5SS	0.5	50	50	ENSMUST00000036748.15	ENSMUSG00000034224.15	Slc38a8	chr8	protein_coding	solute carrier family 38, member 8
chr8	120274624;120276445	120276297;120285385	-	120274624	120285385	cassetteExon	0.5	100	100	ENSMUST00000212601.2	ENSMUSG00000031835.17	Mbtps1	chr8	protein_coding	membrane-bound transcription factor peptidase, site 1
chr8	120242448	120242547	-	120242448	120244878	A5SS	0.5	50	50	ENSMUST00000212601.2	ENSMUSG00000031835.17	Mbtps1	chr8	protein_coding	membrane-bound transcription factor peptidase, site 1
chr8	120274624	120285129	-	120274624	120285385	A5SS	0.33	50	50	ENSMUST00000212601.2	ENSMUSG00000031835.17	Mbtps1	chr8	protein_coding	membrane-bound transcription factor peptidase, site 1
chr8	120274624	120285129	-	120274624	120276297	A5SS&ES	0.33	50	50	ENSMUST00000098362.11	ENSMUSG00000031835.17	Mbtps1	chr8	protein_coding	membrane-bound transcription factor peptidase, site 1
chr8	120294730;120301263	120301188;120301831	-	120294730	120301831	cassetteExon	0.5	100	100	ENSMUST00000036049.6	ENSMUSG00000034189.6	Hsdl1	chr8	protein_coding	hydroxysteroid dehydrogenase like 1
chr8	120294689	120301831	-	120294730	120301831	A3SS	0.33	50	50	ENSMUST00000036049.6	ENSMUSG00000034189.6	Hsdl1	chr8	protein_coding	hydroxysteroid dehydrogenase like 1
chr8	120294689	120301831	-	120294689	120296717	5pMXE	0.5	50	50	ENSMUST00000212517.2	ENSMUSG00000034189.6	Hsdl1	chr8	protein_coding	hydroxysteroid dehydrogenase like 1
chr8	120301263	120301831	-	120294689	120301831	A3SS	0.33	50	50	ENSMUST00000212065.2	ENSMUSG00000034189.6	Hsdl1	chr8	protein_coding	hydroxysteroid dehydrogenase like 1
chr8	120328519	120329570	-	120328519	120329497	A5SS	0.5	50	50	ENSMUST00000212929.2	ENSMUSG00000031832.16	Taf1c	chr8	protein_coding	TATA-box binding protein associated factor, RNA polymerase I, C
chr8	120327535;120328171	120327690;120328281	-	120327535	120328281	cassetteExon	0.5	100	100	ENSMUST00000126547.2	ENSMUSG00000031832.16	Taf1c	chr8	protein_coding	TATA-box binding protein associated factor, RNA polymerase I, C
chr8	120452961	120453065	+	120452961	120461027	A3SS	0.5	50	50	ENSMUST00000212454.2	ENSMUSG00000034112.10	Atp2c2	chr8	protein_coding	ATPase, Ca++ transporting, type 2C, member 2
chr8	120457017	120461027	+	120452961	120461027	A5SS	0.5	50	50	ENSMUST00000212454.2	ENSMUSG00000034112.10	Atp2c2	chr8	protein_coding	ATPase, Ca++ transporting, type 2C, member 2
chr8	120500179	120504885	-	120500179	120505099	A5SS	0.5	50	50	ENSMUST00000049156.7	ENSMUSG00000034105.10	Meak7	chr8	protein_coding	MTOR associated protein , eak-7 homolog
chr8	120591818;120593349	120593222;120596361	+	120591818	120596361	cassetteExon	0.5	100	100	ENSMUST00000212636.2	ENSMUSG00000031828.10	Klhl36	chr8	protein_coding	kelch-like 36
chr8	120680084	120682937	+	120680084;120681672	120681528;120682937	ES	0.5	50	50	ENSMUST00000144458.8	ENSMUSG00000031826.21	Usp10	chr8	protein_coding	ubiquitin specific peptidase 10
chr8	120663327	120667852	+	120663327	120667849	A3SS	0.5	50	50	ENSMUST00000144458.8	ENSMUSG00000031826.21	Usp10	chr8	protein_coding	ubiquitin specific peptidase 10
chr8	120678837	120679141	+	120678837	120679919	A3SS	0.5	50	50	ENSMUST00000144458.8	ENSMUSG00000031826.21	Usp10	chr8	protein_coding	ubiquitin specific peptidase 10
chr8	120683002	120683896	+	120683002	120683322	A3SS	0.5	50	50	ENSMUST00000144458.8	ENSMUSG00000031826.21	Usp10	chr8	protein_coding	ubiquitin specific peptidase 10
chr8	120670985	120673814	+	120668877	120673814	A5SS	0.33	50	50	ENSMUST00000144458.8	ENSMUSG00000031826.21	Usp10	chr8	protein_coding	ubiquitin specific peptidase 10
chr8	120637678	120658588	+	120637678	120673814	A3SS	0.5	50	50	ENSMUST00000108982.11	ENSMUSG00000031826.21	Usp10	chr8	protein_coding	ubiquitin specific peptidase 10
chr8	120668877	120673814	+	120637678	120673814	A5SS	0.33	50	50	ENSMUST00000108982.11	ENSMUSG00000031826.21	Usp10	chr8	protein_coding	ubiquitin specific peptidase 10
chr8	120670985	120673814	+	120637678	120673814	A5SS	0.33	50	50	ENSMUST00000108982.11	ENSMUSG00000031826.21	Usp10	chr8	protein_coding	ubiquitin specific peptidase 10
chr8	120680084	120682937	+	120680084	120681528	3pMXE	0.5	50	50	ENSMUST00000137310.2	ENSMUSG00000031826.21	Usp10	chr8	protein_coding	ubiquitin specific peptidase 10
chr8	120637678	120658588	+	120637678	125022097	A3SS	0.33	50	50	ENSMUST00000127664.2	ENSMUSG00000092329.2	Galnt2l	chr8	protein_coding	polypeptide N-acetylgalactosaminyltransferase 2-like
chr8	120637678	120673814	+	120637678	125022097	A3SS	0.33	50	50	ENSMUST00000127664.2	ENSMUSG00000092329.2	Galnt2l	chr8	protein_coding	polypeptide N-acetylgalactosaminyltransferase 2-like
chr8	125022190	125072039	+	125022190	125032254	A3SS&ES	0.5	50	50	ENSMUST00000127664.2	ENSMUSG00000092329.2	Galnt2l	chr8	protein_coding	polypeptide N-acetylgalactosaminyltransferase 2-like
chr8	124958388	125022097	+	120637678	125022097	A5SS	0.33	50	50	ENSMUST00000127664.2	ENSMUSG00000092329.2	Galnt2l	chr8	protein_coding	polypeptide N-acetylgalactosaminyltransferase 2-like
chr8	125022008	125022097	+	120637678	125022097	A5SS	0.33	50	50	ENSMUST00000127664.2	ENSMUSG00000092329.2	Galnt2l	chr8	protein_coding	polypeptide N-acetylgalactosaminyltransferase 2-like
chr8	120745692	120750304	+	120745692	120750307	A3SS	0.5	50	50	ENSMUST00000132583.8	ENSMUSG00000031825.17	Crispld2	chr8	protein_coding	cysteine-rich secretory protein LCCL domain containing 2
chr8	120729590	120737173	+	120719339	120737173	A5SS	0.5	50	50	ENSMUST00000132583.8	ENSMUSG00000031825.17	Crispld2	chr8	protein_coding	cysteine-rich secretory protein LCCL domain containing 2
chr8	120740136	120740749	+	120737490	120740749	A5SS	0.5	50	50	ENSMUST00000132583.8	ENSMUSG00000031825.17	Crispld2	chr8	protein_coding	cysteine-rich secretory protein LCCL domain containing 2
chr8	120819740	120827593	-	120819740	120827831	A5SS	0.5	50	50	ENSMUST00000034280.9	ENSMUSG00000031823.15	Zdhhc7	chr8	protein_coding	zinc finger, DHHC domain containing 7
chr8	120871318	120871942	+	120841056	120871942	A5SS	0.25	50	50	ENSMUST00000212474.2	ENSMUSG00000031824.16	6430548M08Rik	chr8	protein_coding	RIKEN cDNA 6430548M08 gene
chr8	120871534	120871942	+	120841056	120871942	A5SS	0.25	50	50	ENSMUST00000212474.2	ENSMUSG00000031824.16	6430548M08Rik	chr8	protein_coding	RIKEN cDNA 6430548M08 gene
chr8	120871812	120871942	+	120841056	120871942	A5SS	0.25	50	50	ENSMUST00000212474.2	ENSMUSG00000031824.16	6430548M08Rik	chr8	protein_coding	RIKEN cDNA 6430548M08 gene
chr8	120883113	120886698	+	120883113;120884236	120884207;120886698	ES	0.5	50	50	ENSMUST00000034281.13	ENSMUSG00000031824.16	6430548M08Rik	chr8	protein_coding	RIKEN cDNA 6430548M08 gene
chr8	120882736	120883036	+	120880739	120883036	A5SS	0.5	50	50	ENSMUST00000034281.13	ENSMUSG00000031824.16	6430548M08Rik	chr8	protein_coding	RIKEN cDNA 6430548M08 gene
chr8	120871534	120871942	+	120871318	120871942	A5SS	0.25	50	50	ENSMUST00000132229.2	ENSMUSG00000031824.16	6430548M08Rik	chr8	protein_coding	RIKEN cDNA 6430548M08 gene
chr8	120871812	120871942	+	120871318	120871942	A5SS	0.25	50	50	ENSMUST00000132229.2	ENSMUSG00000031824.16	6430548M08Rik	chr8	protein_coding	RIKEN cDNA 6430548M08 gene
chr8	120871812	120871942	+	120871534	120871942	A5SS	0.25	50	50	ENSMUST00000153725.8	ENSMUSG00000031824.16	6430548M08Rik	chr8	protein_coding	RIKEN cDNA 6430548M08 gene
chr8	120898728	120901449	-	120898728;120898883	120898815;120901449	ES	0.5	50	50	ENSMUST00000048786.13	ENSMUSG00000042269.16	Cibar2	chr8	protein_coding	CBY1 interacting BAR domain containing 2
chr8	120898883	120904053	-	120898883;120901683	120901449;120904053	ES	0.5	50	50	ENSMUST00000048786.13	ENSMUSG00000042269.16	Cibar2	chr8	protein_coding	CBY1 interacting BAR domain containing 2
chr8	120896548	120898345	-	120896548	120898479	A5SS	0.5	50	50	ENSMUST00000048786.13	ENSMUSG00000042269.16	Cibar2	chr8	protein_coding	CBY1 interacting BAR domain containing 2
chr8	120901683	120903979	-	120901683	120904053	A5SS	0.5	50	50	ENSMUST00000048786.13	ENSMUSG00000042269.16	Cibar2	chr8	protein_coding	CBY1 interacting BAR domain containing 2
chr8	120898728;120901683	120901449;120904053	-	120898728;120898883	120898815;120904053	MXE	0.5	100	100	ENSMUST00000153177.2	ENSMUSG00000042269.16	Cibar2	chr8	protein_coding	CBY1 interacting BAR domain containing 2
chr8	121215890	121280323	+	121080918	121280323	A5SS	0.25	50	50	ENSMUST00000180448.3	ENSMUSG00000031822.21	Gse1	chr8	protein_coding	genetic suppressor element 1, coiled-coil protein
chr8	121262693	121280323	+	121080918	121280323	A5SS	0.25	50	50	ENSMUST00000180448.3	ENSMUSG00000031822.21	Gse1	chr8	protein_coding	genetic suppressor element 1, coiled-coil protein
chr8	121264301	121280323	+	121080918	121280323	A5SS	0.25	50	50	ENSMUST00000180448.3	ENSMUSG00000031822.21	Gse1	chr8	protein_coding	genetic suppressor element 1, coiled-coil protein
chr8	121299645	121301673	+	121299645;121301017	121300910;121301673	ES	0.5	50	50	ENSMUST00000034279.16	ENSMUSG00000031822.21	Gse1	chr8	protein_coding	genetic suppressor element 1, coiled-coil protein
chr8	121289564	121290404	+	121289564	121293107	A3SS	0.5	50	50	ENSMUST00000034279.16	ENSMUSG00000031822.21	Gse1	chr8	protein_coding	genetic suppressor element 1, coiled-coil protein
chr8	121262693	121280323	+	121215890	121280323	A5SS	0.25	50	50	ENSMUST00000034279.16	ENSMUSG00000031822.21	Gse1	chr8	protein_coding	genetic suppressor element 1, coiled-coil protein
chr8	121264301	121280323	+	121215890	121280323	A5SS	0.25	50	50	ENSMUST00000034279.16	ENSMUSG00000031822.21	Gse1	chr8	protein_coding	genetic suppressor element 1, coiled-coil protein
chr8	121264301	121280323	+	121262693	121280323	A5SS	0.25	50	50	ENSMUST00000120493.8	ENSMUSG00000031822.21	Gse1	chr8	protein_coding	genetic suppressor element 1, coiled-coil protein
chr8	121312931;121314289	121314195;121315464	-	121312931	121315464	cassetteExon	0.5	100	100	ENSMUST00000146526.8	ENSMUSG00000031821.12	Gins2	chr8	protein_coding	GINS complex subunit 2 (Psf2 homolog)
chr8	121355256	121374259	-	121355256	121361007	5pMXE	0.25	50	50	ENSMUST00000123927.9	ENSMUSG00000043687.17	1190005I06Rik	chr8	protein_coding	RIKEN cDNA 1190005I06 gene
chr8	121355256	121394496	-	121355256	121361007	5pMXE	0.25	50	50	ENSMUST00000123927.9	ENSMUSG00000043687.17	1190005I06Rik	chr8	protein_coding	RIKEN cDNA 1190005I06 gene
chr8	121355256	121360881	-	121355256	121361007	A5SS	0.25	50	50	ENSMUST00000123927.9	ENSMUSG00000043687.17	1190005I06Rik	chr8	protein_coding	RIKEN cDNA 1190005I06 gene
chr8	121355256	121394496	-	121355256	121374259	5pMXE	0.25	50	50	ENSMUST00000180677.2	ENSMUSG00000043687.17	1190005I06Rik	chr8	protein_coding	RIKEN cDNA 1190005I06 gene
chr8	121355256	121360881	-	121355256	121374259	A5SS	0.25	50	50	ENSMUST00000180677.2	ENSMUSG00000043687.17	1190005I06Rik	chr8	protein_coding	RIKEN cDNA 1190005I06 gene
chr8	121355256	121394496	-	121355256	121360881	5pMXE	0.25	50	50	ENSMUST00000144417.2	ENSMUSG00000043687.17	1190005I06Rik	chr8	protein_coding	RIKEN cDNA 1190005I06 gene
chr8	121384987	121394496	-	121355256	121394496	A3SS	0.33	50	50	ENSMUST00000181333.2	ENSMUSG00000097919.2	Gm27021	chr8	protein_coding	predicted gene, 27021
chr8	121387599	121394496	-	121355256	121394496	A3SS	0.33	50	50	ENSMUST00000181333.2	ENSMUSG00000097919.2	Gm27021	chr8	protein_coding	predicted gene, 27021
chr8	121385813;121386756	121386698;121387523	-	121385813	121387523	cassetteExon	0.5	100	100	ENSMUST00000034277.14	ENSMUSG00000031819.14	Emc8	chr8	protein_coding	ER membrane protein complex subunit 8
chr8	121385813;121386926	121386698;121387523	-	121385813	121387523	cassetteExon	0.5	100	100	ENSMUST00000034277.14	ENSMUSG00000031819.14	Emc8	chr8	protein_coding	ER membrane protein complex subunit 8
chr8	121387409	121387523	-	121385813	121387523	A3SS	0.25	50	50	ENSMUST00000034277.14	ENSMUSG00000031819.14	Emc8	chr8	protein_coding	ER membrane protein complex subunit 8
chr8	121384987	121385291	-	121384987	121385267	A5SS	0.33	50	50	ENSMUST00000034277.14	ENSMUSG00000031819.14	Emc8	chr8	protein_coding	ER membrane protein complex subunit 8
chr8	121385813	121387574	-	121385813	121387523	A5SS	0.33	50	50	ENSMUST00000034277.14	ENSMUSG00000031819.14	Emc8	chr8	protein_coding	ER membrane protein complex subunit 8
chr8	121386926;121387409	121387233;121387523	-	121386926	121387523	cassetteExon	0.5	100	100	ENSMUST00000181402.2	ENSMUSG00000031819.14	Emc8	chr8	protein_coding	ER membrane protein complex subunit 8
chr8	121386756	121387523	-	121386926	121387523	A3SS	0.25	50	50	ENSMUST00000181402.2	ENSMUSG00000031819.14	Emc8	chr8	protein_coding	ER membrane protein complex subunit 8
chr8	121385813	121387574	-	121385813	121386698	A5SS&ES	0.33	50	50	ENSMUST00000181402.2	ENSMUSG00000031819.14	Emc8	chr8	protein_coding	ER membrane protein complex subunit 8
chr8	121387599	121394496	-	121384987	121394496	A3SS	0.33	50	50	ENSMUST00000181950.2	ENSMUSG00000031819.14	Emc8	chr8	protein_coding	ER membrane protein complex subunit 8
chr8	121384987	121385267	-	121384987	121394496	A5SS	0.33	50	50	ENSMUST00000181950.2	ENSMUSG00000031819.14	Emc8	chr8	protein_coding	ER membrane protein complex subunit 8
chr8	121384987	121385291	-	121384987	121394496	A5SS	0.33	50	50	ENSMUST00000181950.2	ENSMUSG00000031819.14	Emc8	chr8	protein_coding	ER membrane protein complex subunit 8
chr8	121386756	121387523	-	121387409	121387523	A3SS&ES	0.25	50	50	ENSMUST00000180417.8	ENSMUSG00000031819.14	Emc8	chr8	protein_coding	ER membrane protein complex subunit 8
chr8	121385813	121387523	-	121386756	121387523	3pMXE	0.25	50	50	ENSMUST00000181334.2	ENSMUSG00000031819.14	Emc8	chr8	protein_coding	ER membrane protein complex subunit 8
chr8	121396121;121397883	121397742;121399464	+	121396121	121399464	cassetteExon	0.5	100	100	ENSMUST00000034276.13	ENSMUSG00000031818.13	Cox4i1	chr8	protein_coding	cytochrome c oxidase subunit 4I1
chr8	121396121	121399468	+	121396121	121399464	A3SS	0.33	50	50	ENSMUST00000034276.13	ENSMUSG00000031818.13	Cox4i1	chr8	protein_coding	cytochrome c oxidase subunit 4I1
chr8	121395090	121396048	+	121395094	121396048	A5SS	0.33	50	50	ENSMUST00000034276.13	ENSMUSG00000031818.13	Cox4i1	chr8	protein_coding	cytochrome c oxidase subunit 4I1
chr8	121395114	121396048	+	121395094	121396048	A5SS	0.33	50	50	ENSMUST00000034276.13	ENSMUSG00000031818.13	Cox4i1	chr8	protein_coding	cytochrome c oxidase subunit 4I1
chr8	121395090	121396048	+	121395114	121396048	A5SS	0.33	50	50	ENSMUST00000181586.8	ENSMUSG00000031818.13	Cox4i1	chr8	protein_coding	cytochrome c oxidase subunit 4I1
chr8	121396121	121397742	+	121396121	121399468	A3SS	0.33	50	50	ENSMUST00000181795.2	ENSMUSG00000031818.13	Cox4i1	chr8	protein_coding	cytochrome c oxidase subunit 4I1
chr8	121466730	121470445	+	121466730	121473942	A3SS	0.5	50	50	ENSMUST00000160943.3	ENSMUSG00000041515.11	Irf8	chr8	protein_coding	interferon regulatory factor 8
chr8	121465965	121466556	+	121463148	121466556	A5SS	0.5	50	50	ENSMUST00000160943.3	ENSMUSG00000041515.11	Irf8	chr8	protein_coding	interferon regulatory factor 8
chr8	121472447	121473942	+	121466730	121473942	A5SS	0.5	50	50	ENSMUST00000160943.3	ENSMUSG00000041515.11	Irf8	chr8	protein_coding	interferon regulatory factor 8
chr8	121479184	121480092	+	121475085	121480092	A5SS	0.5	50	50	ENSMUST00000160943.3	ENSMUSG00000041515.11	Irf8	chr8	protein_coding	interferon regulatory factor 8
chr8	121792518;121793585	121793404;121800262	-	121792518	121800262	cassetteExon	0.5	100	100	ENSMUST00000181530.8	ENSMUSG00000097336.9	Fendrr	chr8	lncRNA	Foxf1 adjacent non-coding developmental regulatory RNA
chr8	121786129	121786224	-	121781791	121786224	A3SS	0.5	50	50	ENSMUST00000181530.8	ENSMUSG00000097336.9	Fendrr	chr8	lncRNA	Foxf1 adjacent non-coding developmental regulatory RNA
chr8	121828275	121831131	-	121828275;121829743	121829653;121831131	ES	0.25	50	50	ENSMUST00000047282.12	ENSMUSG00000031816.16	Mthfsd	chr8	protein_coding	methenyltetrahydrofolate synthetase domain containing
chr8	121831244;121832426	121832313;121833609	-	121831244;121832570	121832457;121833609	MXE	0.5	100	100	ENSMUST00000047282.12	ENSMUSG00000031816.16	Mthfsd	chr8	protein_coding	methenyltetrahydrofolate synthetase domain containing
chr8	121833712;121834381	121834261;121834933	-	121833712	121834933	cassetteExon	0.5	100	100	ENSMUST00000047282.12	ENSMUSG00000031816.16	Mthfsd	chr8	protein_coding	methenyltetrahydrofolate synthetase domain containing
chr8	121830914	121831131	-	121829743	121831131	A3SS	0.25	50	50	ENSMUST00000047282.12	ENSMUSG00000031816.16	Mthfsd	chr8	protein_coding	methenyltetrahydrofolate synthetase domain containing
chr8	121830919	121831131	-	121829743	121831131	A3SS	0.25	50	50	ENSMUST00000047282.12	ENSMUSG00000031816.16	Mthfsd	chr8	protein_coding	methenyltetrahydrofolate synthetase domain containing
chr8	121831297	121832457	-	121831244	121832457	A3SS	0.5	50	50	ENSMUST00000047282.12	ENSMUSG00000031816.16	Mthfsd	chr8	protein_coding	methenyltetrahydrofolate synthetase domain containing
chr8	121833712	121834730	-	121833712	121834933	A5SS	0.25	50	50	ENSMUST00000047282.12	ENSMUSG00000031816.16	Mthfsd	chr8	protein_coding	methenyltetrahydrofolate synthetase domain containing
chr8	121833712	121835027	-	121833712	121834933	A5SS	0.25	50	50	ENSMUST00000047282.12	ENSMUSG00000031816.16	Mthfsd	chr8	protein_coding	methenyltetrahydrofolate synthetase domain containing
chr8	121824664	121825447	-	121821985	121825447	A3SS	0.5	50	50	ENSMUST00000133058.8	ENSMUSG00000031816.16	Mthfsd	chr8	protein_coding	methenyltetrahydrofolate synthetase domain containing
chr8	121833712	121834261	-	121833712	121835027	A5SS	0.25	50	50	ENSMUST00000116415.9	ENSMUSG00000031816.16	Mthfsd	chr8	protein_coding	methenyltetrahydrofolate synthetase domain containing
chr8	121833712	121834730	-	121833712	121835027	A5SS	0.25	50	50	ENSMUST00000116415.9	ENSMUSG00000031816.16	Mthfsd	chr8	protein_coding	methenyltetrahydrofolate synthetase domain containing
chr8	121831297;121832570	121832457;121833609	-	121831297;121832426	121832313;121833609	MXE	0.5	100	100	ENSMUST00000128052.8	ENSMUSG00000031816.16	Mthfsd	chr8	protein_coding	methenyltetrahydrofolate synthetase domain containing
chr8	121831244	121832313	-	121831297	121832313	A3SS	0.5	50	50	ENSMUST00000128052.8	ENSMUSG00000031816.16	Mthfsd	chr8	protein_coding	methenyltetrahydrofolate synthetase domain containing
chr8	121828275	121831131	-	121829743	121831131	A3SS	0.25	50	50	ENSMUST00000149718.8	ENSMUSG00000031816.16	Mthfsd	chr8	protein_coding	methenyltetrahydrofolate synthetase domain containing
chr8	121833712	121834730	-	121833712	121834261	A5SS&ES	0.33	50	50	ENSMUST00000134758.8	ENSMUSG00000031816.16	Mthfsd	chr8	protein_coding	methenyltetrahydrofolate synthetase domain containing
chr8	121831244	121832457	-	121831244	121832313	5pMXE	0.5	50	50	ENSMUST00000138908.8	ENSMUSG00000031816.16	Mthfsd	chr8	protein_coding	methenyltetrahydrofolate synthetase domain containing
chr8	121830914	121831131	-	121828275	121831131	A3SS	0.25	50	50	ENSMUST00000138908.8	ENSMUSG00000031816.16	Mthfsd	chr8	protein_coding	methenyltetrahydrofolate synthetase domain containing
chr8	121830919	121831131	-	121828275	121831131	A3SS	0.25	50	50	ENSMUST00000138908.8	ENSMUSG00000031816.16	Mthfsd	chr8	protein_coding	methenyltetrahydrofolate synthetase domain containing
chr8	121833712	121834933	-	121833712	121834261	5pMXE	0.25	50	50	ENSMUST00000156606.8	ENSMUSG00000031816.16	Mthfsd	chr8	protein_coding	methenyltetrahydrofolate synthetase domain containing
chr8	121830914	121831131	-	121830919	121831131	A3SS	0.25	50	50	ENSMUST00000145991.2	ENSMUSG00000031816.16	Mthfsd	chr8	protein_coding	methenyltetrahydrofolate synthetase domain containing
chr8	122267319	122268909	-	122267319	122268458	5pMXE	0.5	50	50	ENSMUST00000034265.11	ENSMUSG00000031809.11	1700018B08Rik	chr8	protein_coding	RIKEN cDNA 1700018B08 gene
chr8	122267315	122268458	-	122267319	122268458	A3SS	0.5	50	50	ENSMUST00000034265.11	ENSMUSG00000031809.11	1700018B08Rik	chr8	protein_coding	RIKEN cDNA 1700018B08 gene
chr8	122266746	122267268	-	122266746	122267276	A5SS	0.5	50	50	ENSMUST00000034265.11	ENSMUSG00000031809.11	1700018B08Rik	chr8	protein_coding	RIKEN cDNA 1700018B08 gene
chr8	122271461;122272096	122272006;122273854	+	122271461	122273854	cassetteExon	0.5	100	100	ENSMUST00000181133.3	ENSMUSG00000097424.3	1700030M09Rik	chr8	lncRNA	RIKEN cDNA 1700030M09 gene
chr8	122287201;122291463	122291377;122293014	-	122287201	122293014	cassetteExon	0.5	100	100	ENSMUST00000059018.14	ENSMUSG00000052934.15	Fbxo31	chr8	protein_coding	F-box protein 31
chr8	122282098	122282859	-	122282098	122282981	A5SS	0.5	50	50	ENSMUST00000059018.14	ENSMUSG00000052934.15	Fbxo31	chr8	protein_coding	F-box protein 31
chr8	122287201	122293014	-	122291463	122293014	3pMXE	0.5	50	50	ENSMUST00000181663.2	ENSMUSG00000052934.15	Fbxo31	chr8	protein_coding	F-box protein 31
chr8	122317662	122320229	+	122317303	122320229	A5SS	0.5	50	50	ENSMUST00000034270.17	ENSMUSG00000031812.17	Map1lc3b	chr8	protein_coding	microtubule-associated protein 1 light chain 3 beta
chr8	122320389	122322725	+	122320284	122322725	A5SS	0.5	50	50	ENSMUST00000034270.17	ENSMUSG00000031812.17	Map1lc3b	chr8	protein_coding	microtubule-associated protein 1 light chain 3 beta
chr8	122328988	122330547	-	122329070	122330547	A3SS	0.5	50	50	ENSMUST00000046386.5	ENSMUSG00000061410.7	Zcchc14	chr8	protein_coding	zinc finger, CCHC domain containing 14
chr8	122457743	122479706	+	122456462	122479706	A5SS	0.5	50	50	ENSMUST00000169735.2	ENSMUSG00000025318.14	Jph3	chr8	protein_coding	junctophilin 3
chr8	122531845	122540446	-	122531845;122533337	122533245;122540446	ES	0.5	50	50	ENSMUST00000045884.17	ENSMUSG00000040263.17	Klhdc4	chr8	protein_coding	kelch domain containing 4
chr8	122546959	122548521	-	122546959;122548097	122548019;122548521	ES	0.5	50	50	ENSMUST00000045884.17	ENSMUSG00000040263.17	Klhdc4	chr8	protein_coding	kelch domain containing 4
chr8	122548097	122556121	-	122548097;122548612	122548521;122556121	ES	0.25	50	50	ENSMUST00000045884.17	ENSMUSG00000040263.17	Klhdc4	chr8	protein_coding	kelch domain containing 4
chr8	122548736	122556121	-	122548612	122556121	A3SS	0.25	50	50	ENSMUST00000045884.17	ENSMUSG00000040263.17	Klhdc4	chr8	protein_coding	kelch domain containing 4
chr8	122531845	122532015	-	122531845	122533245	A5SS	0.33	50	50	ENSMUST00000045884.17	ENSMUSG00000040263.17	Klhdc4	chr8	protein_coding	kelch domain containing 4
chr8	122531845	122532015	-	122531845	122540446	A5SS	0.33	50	50	ENSMUST00000174717.8	ENSMUSG00000040263.17	Klhdc4	chr8	protein_coding	kelch domain containing 4
chr8	122546959	122556121	-	122546959;122548612	122548521;122556121	ES	0.25	50	50	ENSMUST00000174665.8	ENSMUSG00000040263.17	Klhdc4	chr8	protein_coding	kelch domain containing 4
chr8	122546959;122548097	122548019;122556121	-	122546959;122548612	122548521;122556121	MXE	0.5	100	100	ENSMUST00000174665.8	ENSMUSG00000040263.17	Klhdc4	chr8	protein_coding	kelch domain containing 4
chr8	122546959;122548097	122548019;122556121	-	122546959	122556121	cassetteExon	0.5	100	100	ENSMUST00000174192.2	ENSMUSG00000040263.17	Klhdc4	chr8	protein_coding	kelch domain containing 4
chr8	122546959;122548736	122548521;122556121	-	122546959	122556121	cassetteExon	0.5	100	100	ENSMUST00000174192.2	ENSMUSG00000040263.17	Klhdc4	chr8	protein_coding	kelch domain containing 4
chr8	122546959	122556121	-	122548097	122556121	3pMXE	0.25	50	50	ENSMUST00000172470.2	ENSMUSG00000040263.17	Klhdc4	chr8	protein_coding	kelch domain containing 4
chr8	122548097;122548736	122548521;122556121	-	122548097	122556121	cassetteExon	0.5	100	100	ENSMUST00000172470.2	ENSMUSG00000040263.17	Klhdc4	chr8	protein_coding	kelch domain containing 4
chr8	122546959	122548521	-	122548097	122548521	3pMXE	0.5	50	50	ENSMUST00000174255.2	ENSMUSG00000040263.17	Klhdc4	chr8	protein_coding	kelch domain containing 4
chr8	122578719	122586835	+	122577153	122586835	A5SS	0.5	50	50	ENSMUST00000181776.2	ENSMUSG00000097812.2	Gm26812	chr8	lncRNA	predicted gene, 26812
chr8	122615166;122622926	122622882;122623167	-	122615166	122623167	cassetteExon	0.5	100	100	ENSMUST00000045557.10	ENSMUSG00000040010.11	Slc7a5	chr8	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 5
chr8	122653940	122654124	-	122653940	122666374	A5SS	0.5	50	50	ENSMUST00000057653.8	ENSMUSG00000025317.8	Car5a	chr8	protein_coding	carbonic anhydrase 5a, mitochondrial
chr8	122705493;122716810	122716694;122718267	+	122705493	122718267	cassetteExon	0.5	100	100	ENSMUST00000172628.8	ENSMUSG00000025316.17	Banp	chr8	protein_coding	BTG3 associated nuclear protein
chr8	122702730	122705318	+	122702730	122705294	A3SS	0.33	50	50	ENSMUST00000172628.8	ENSMUSG00000025316.17	Banp	chr8	protein_coding	BTG3 associated nuclear protein
chr8	122702730	122705341	+	122702730	122705294	A3SS	0.33	50	50	ENSMUST00000172628.8	ENSMUSG00000025316.17	Banp	chr8	protein_coding	BTG3 associated nuclear protein
chr8	122677387	122701166	+	122676586	122701166	A5SS	0.33	50	50	ENSMUST00000172628.8	ENSMUSG00000025316.17	Banp	chr8	protein_coding	BTG3 associated nuclear protein
chr8	122700624	122701166	+	122676586	122701166	A5SS	0.33	50	50	ENSMUST00000172628.8	ENSMUSG00000025316.17	Banp	chr8	protein_coding	BTG3 associated nuclear protein
chr8	122734530	122750742	+	122734530;122747383	122747258;122750742	ES	0.5	50	50	ENSMUST00000093078.13	ENSMUSG00000025316.17	Banp	chr8	protein_coding	BTG3 associated nuclear protein
chr8	122677387	122696523	+	122677387	122701166	A3SS	0.5	50	50	ENSMUST00000093078.13	ENSMUSG00000025316.17	Banp	chr8	protein_coding	BTG3 associated nuclear protein
chr8	122732421	122733830	+	122732421	122733839	A3SS	0.5	50	50	ENSMUST00000093078.13	ENSMUSG00000025316.17	Banp	chr8	protein_coding	BTG3 associated nuclear protein
chr8	122700624	122701166	+	122677387	122701166	A5SS	0.33	50	50	ENSMUST00000093078.13	ENSMUSG00000025316.17	Banp	chr8	protein_coding	BTG3 associated nuclear protein
chr8	122727481	122727703	+	122724018	122727703	A5SS	0.5	50	50	ENSMUST00000093078.13	ENSMUSG00000025316.17	Banp	chr8	protein_coding	BTG3 associated nuclear protein
chr8	122702730	122705318	+	122702730	122705341	A3SS	0.33	50	50	ENSMUST00000172681.8	ENSMUSG00000025316.17	Banp	chr8	protein_coding	BTG3 associated nuclear protein
chr8	122705493	122718267	+	122705493	122716694	3pMXE	0.5	50	50	ENSMUST00000172513.2	ENSMUSG00000025316.17	Banp	chr8	protein_coding	BTG3 associated nuclear protein
chr8	122734530	122750742	+	122734530	122747258	3pMXE	0.5	50	50	ENSMUST00000173925.8	ENSMUSG00000025316.17	Banp	chr8	protein_coding	BTG3 associated nuclear protein
chr8	123061766	123062252	+	123061766	123061852	A3SS&ES	0.5	50	50	ENSMUST00000054052.15	ENSMUSG00000049577.16	Zfpm1	chr8	protein_coding	zinc finger protein, multitype 1
chr8	123061998	123062252	+	123061998	123062171	A3SS	0.5	50	50	ENSMUST00000054052.15	ENSMUSG00000049577.16	Zfpm1	chr8	protein_coding	zinc finger protein, multitype 1
chr8	123034146	123034231	+	123032219	123034231	A5SS	0.5	50	50	ENSMUST00000054052.15	ENSMUSG00000049577.16	Zfpm1	chr8	protein_coding	zinc finger protein, multitype 1
chr8	123061766	123062252	+	123061766;123061998	123061852;123062252	ES	0.5	50	50	ENSMUST00000176690.2	ENSMUSG00000049577.16	Zfpm1	chr8	protein_coding	zinc finger protein, multitype 1
chr8	123113685	123124557	+	123113685;123114503	123114432;123124557	ES	0.5	50	50	ENSMUST00000017622.12	ENSMUSG00000017478.16	Zc3h18	chr8	protein_coding	zinc finger CCCH-type containing 18
chr8	123135107	123138023	+	123135107;123137724	123137620;123138023	ES	0.5	50	50	ENSMUST00000017622.12	ENSMUSG00000017478.16	Zc3h18	chr8	protein_coding	zinc finger CCCH-type containing 18
chr8	123138166	123139729	+	123138166;123138442	123138377;123139729	ES	0.5	50	50	ENSMUST00000017622.12	ENSMUSG00000017478.16	Zc3h18	chr8	protein_coding	zinc finger CCCH-type containing 18
chr8	123103539;123105476	123105448;123110139	+	123103539	123110139	cassetteExon	0.5	100	100	ENSMUST00000017622.12	ENSMUSG00000017478.16	Zc3h18	chr8	protein_coding	zinc finger CCCH-type containing 18
chr8	123130158	123132525	+	123130158	123134071	A3SS	0.5	50	50	ENSMUST00000017622.12	ENSMUSG00000017478.16	Zc3h18	chr8	protein_coding	zinc finger CCCH-type containing 18
chr8	123113685	123124557	+	123113685	123114432	3pMXE	0.5	50	50	ENSMUST00000177386.2	ENSMUSG00000017478.16	Zc3h18	chr8	protein_coding	zinc finger CCCH-type containing 18
chr8	123135107	123138023	+	123137724	123138023	A5SS	0.5	50	50	ENSMUST00000177123.2	ENSMUSG00000017478.16	Zc3h18	chr8	protein_coding	zinc finger CCCH-type containing 18
chr8	123135107	123138023	+	123135107	123137620	3pMXE	0.5	50	50	ENSMUST00000175798.2	ENSMUSG00000017478.16	Zc3h18	chr8	protein_coding	zinc finger CCCH-type containing 18
chr8	123153006;123153758	123153675;123153968	-	123153006	123153968	cassetteExon	0.5	100	100	ENSMUST00000212600.2	ENSMUSG00000006519.12	Cyba	chr8	protein_coding	cytochrome b-245, alpha polypeptide
chr8	123154463;123155433	123155139;123159549	-	123154463	123159549	cassetteExon	0.5	100	100	ENSMUST00000212600.2	ENSMUSG00000006519.12	Cyba	chr8	protein_coding	cytochrome b-245, alpha polypeptide
chr8	123166491	123166921	-	123166491;123166797	123166695;123166921	ES	0.5	50	50	ENSMUST00000211883.2	ENSMUSG00000006517.6	Mvd	chr8	protein_coding	mevalonate (diphospho) decarboxylase
chr8	123197095	123202384	-	123197095	123202602	A5SS	0.5	50	50	ENSMUST00000014614.4	ENSMUSG00000014470.5	Rnf166	chr8	protein_coding	ring finger protein 166
chr8	123203034	123203645	+	123203034;123203328	123203254;123203645	ES	0.5	50	50	ENSMUST00000116412.8	ENSMUSG00000049482.17	Ctu2	chr8	protein_coding	cytosolic thiouridylase subunit 2
chr8	123207744	123207872	+	123207744	123207825	A3SS	0.5	50	50	ENSMUST00000116412.8	ENSMUSG00000049482.17	Ctu2	chr8	protein_coding	cytosolic thiouridylase subunit 2
chr8	123208268	123208351	+	123208268	123208335	A3SS	0.33	50	50	ENSMUST00000116412.8	ENSMUSG00000049482.17	Ctu2	chr8	protein_coding	cytosolic thiouridylase subunit 2
chr8	123208268	123208360	+	123208268	123208335	A3SS	0.33	50	50	ENSMUST00000116412.8	ENSMUSG00000049482.17	Ctu2	chr8	protein_coding	cytosolic thiouridylase subunit 2
chr8	123203999	123204924	+	123203975	123204924	A5SS	0.5	50	50	ENSMUST00000116412.8	ENSMUSG00000049482.17	Ctu2	chr8	protein_coding	cytosolic thiouridylase subunit 2
chr8	123203034	123203645	+	123203034	123203254	A3SS	0.5	50	50	ENSMUST00000154099.8	ENSMUSG00000049482.17	Ctu2	chr8	protein_coding	cytosolic thiouridylase subunit 2
chr8	123203034	123203645	+	123203328	123203645	A5SS	0.5	50	50	ENSMUST00000149925.8	ENSMUSG00000049482.17	Ctu2	chr8	protein_coding	cytosolic thiouridylase subunit 2
chr8	123208268	123208351	+	123208268	123208360	A3SS	0.33	50	50	ENSMUST00000136253.2	ENSMUSG00000049482.17	Ctu2	chr8	protein_coding	cytosolic thiouridylase subunit 2
chr8	123213682	123214214	-	123213682;123214007	123213749;123214214	ES	0.5	50	50	ENSMUST00000156333.9	ENSMUSG00000014444.18	Piezo1	chr8	protein_coding	piezo-type mechanosensitive ion channel component 1
chr8	123216355	123216802	-	123216365	123216802	A3SS	0.5	50	50	ENSMUST00000156333.9	ENSMUSG00000014444.18	Piezo1	chr8	protein_coding	piezo-type mechanosensitive ion channel component 1
chr8	123221742	123222156	-	123221733	123222156	A3SS	0.5	50	50	ENSMUST00000156333.9	ENSMUSG00000014444.18	Piezo1	chr8	protein_coding	piezo-type mechanosensitive ion channel component 1
chr8	123229047	123232768	-	123229050	123232768	A3SS	0.5	50	50	ENSMUST00000156333.9	ENSMUSG00000014444.18	Piezo1	chr8	protein_coding	piezo-type mechanosensitive ion channel component 1
chr8	123302274;123302970	123302620;123303254	-	123302274	123303254	cassetteExon	0.5	100	100	ENSMUST00000006764.9	ENSMUSG00000006589.9	Aprt	chr8	protein_coding	adenine phosphoribosyl transferase
chr8	123302274;123302970	123302858;123303254	-	123302274	123303254	cassetteExon	0.5	100	100	ENSMUST00000006764.9	ENSMUSG00000006589.9	Aprt	chr8	protein_coding	adenine phosphoribosyl transferase
chr8	123302274;123302991	123302620;123303254	-	123302274	123303254	cassetteExon	0.5	100	100	ENSMUST00000006764.9	ENSMUSG00000006589.9	Aprt	chr8	protein_coding	adenine phosphoribosyl transferase
chr8	123302274;123302991	123302858;123303254	-	123302274	123303254	cassetteExon	0.5	100	100	ENSMUST00000006764.9	ENSMUSG00000006589.9	Aprt	chr8	protein_coding	adenine phosphoribosyl transferase
chr8	123302274;123302745	123302620;123302858	-	123302274	123302858	cassetteExon	0.5	100	100	ENSMUST00000212093.2	ENSMUSG00000006589.9	Aprt	chr8	protein_coding	adenine phosphoribosyl transferase
chr8	123302991	123303254	-	123302970	123303254	A3SS	0.33	50	50	ENSMUST00000212093.2	ENSMUSG00000006589.9	Aprt	chr8	protein_coding	adenine phosphoribosyl transferase
chr8	123302274	123303254	-	123302274	123302858	A5SS	0.33	50	50	ENSMUST00000213029.2	ENSMUSG00000006589.9	Aprt	chr8	protein_coding	adenine phosphoribosyl transferase
chr8	123302274	123303254	-	123302970	123303254	3pMXE	0.33	50	50	ENSMUST00000211810.2	ENSMUSG00000006589.9	Aprt	chr8	protein_coding	adenine phosphoribosyl transferase
chr8	123305936;123306126	123306034;123307790	-	123305936	123307790	cassetteExon	0.5	100	100	ENSMUST00000015171.11	ENSMUSG00000015027.12	Galns	chr8	protein_coding	galactosamine (N-acetyl)-6-sulfate sulfatase
chr8	123319076	123322505	-	123311772	123322505	A3SS	0.5	50	50	ENSMUST00000212319.2	ENSMUSG00000015027.12	Galns	chr8	protein_coding	galactosamine (N-acetyl)-6-sulfate sulfatase
chr8	123311772	123318177	-	123311772	123322505	A5SS	0.5	50	50	ENSMUST00000212319.2	ENSMUSG00000015027.12	Galns	chr8	protein_coding	galactosamine (N-acetyl)-6-sulfate sulfatase
chr8	123340747	123341047	+	123340747	123340899	3pMXE	0.5	50	50	ENSMUST00000212477.2	ENSMUSG00000015013.10	Trappc2l	chr8	protein_coding	trafficking protein particle complex 2-like
chr8	123348908	123349173	-	123348863	123349173	A3SS	0.5	50	50	ENSMUST00000093059.3	ENSMUSG00000069867.4	Pabpn1l	chr8	protein_coding	poly(A)binding protein nuclear 1-like
chr8	123370272	123377069	-	123370272;123374517	123374440;123377069	ES	0.5	50	50	ENSMUST00000127984.9	ENSMUSG00000006362.17	Cbfa2t3	chr8	protein_coding	CBFA2/RUNX1 translocation partner 3
chr8	123370272	123373151	-	123370272	123374440	A5SS	0.25	50	50	ENSMUST00000127984.9	ENSMUSG00000006362.17	Cbfa2t3	chr8	protein_coding	CBFA2/RUNX1 translocation partner 3
chr8	123370272	123404601	-	123370272	123374440	A5SS&ES	0.25	50	50	ENSMUST00000127984.9	ENSMUSG00000006362.17	Cbfa2t3	chr8	protein_coding	CBFA2/RUNX1 translocation partner 3
chr8	123377215	123404601	-	123377215	123425554	A5SS	0.33	50	50	ENSMUST00000127984.9	ENSMUSG00000006362.17	Cbfa2t3	chr8	protein_coding	CBFA2/RUNX1 translocation partner 3
chr8	123377215	123405377	-	123377215	123425554	A5SS	0.33	50	50	ENSMUST00000127984.9	ENSMUSG00000006362.17	Cbfa2t3	chr8	protein_coding	CBFA2/RUNX1 translocation partner 3
chr8	123370272	123404601	-	123370272;123377215	123377069;123404601	ES	0.5	50	50	ENSMUST00000006525.14	ENSMUSG00000006362.17	Cbfa2t3	chr8	protein_coding	CBFA2/RUNX1 translocation partner 3
chr8	123377215	123405377	-	123377215	123404601	5pMXE	0.33	50	50	ENSMUST00000006525.14	ENSMUSG00000006362.17	Cbfa2t3	chr8	protein_coding	CBFA2/RUNX1 translocation partner 3
chr8	123370272	123373151	-	123370272	123377069	A5SS	0.25	50	50	ENSMUST00000006525.14	ENSMUSG00000006362.17	Cbfa2t3	chr8	protein_coding	CBFA2/RUNX1 translocation partner 3
chr8	123370272	123404601	-	123370272	123373151	5pMXE	0.25	50	50	ENSMUST00000142535.8	ENSMUSG00000006362.17	Cbfa2t3	chr8	protein_coding	CBFA2/RUNX1 translocation partner 3
chr8	123456633	123460827	-	123456633	123478853	A5SS	0.5	50	50	ENSMUST00000212444.2	ENSMUSG00000110523.2	C230057M02Rik	chr8	lncRNA	RIKEN cDNA C230057M02 gene
chr8	123488913	123489393	-	123488913	123489402	A5SS	0.5	50	50	ENSMUST00000212007.2	ENSMUSG00000110682.2	A530010L16Rik	chr8	lncRNA	RIKEN cDNA A530010L16 gene
chr8	123502329;123504962	123504816;123506685	+	123502329	123506685	cassetteExon	0.5	100	100	ENSMUST00000212903.2	ENSMUSG00000015016.9	Acsf3	chr8	protein_coding	acyl-CoA synthetase family member 3
chr8	123510840;123512703	123512558;123517329	+	123510840	123517329	cassetteExon	0.5	100	100	ENSMUST00000212903.2	ENSMUSG00000015016.9	Acsf3	chr8	protein_coding	acyl-CoA synthetase family member 3
chr8	123502367	123506685	+	123502329	123506685	A5SS	0.33	50	50	ENSMUST00000212903.2	ENSMUSG00000015016.9	Acsf3	chr8	protein_coding	acyl-CoA synthetase family member 3
chr8	123502367	123506685	+	123504962	123506685	A5SS&ES	0.33	50	50	ENSMUST00000212781.2	ENSMUSG00000015016.9	Acsf3	chr8	protein_coding	acyl-CoA synthetase family member 3
chr8	123626888	123635407	-	123626888;123627437	123627341;123635407	ES	0.33	50	50	ENSMUST00000172906.8	ENSMUSG00000035569.18	Ankrd11	chr8	protein_coding	ankyrin repeat domain 11
chr8	123626543	123626718	-	123626546	123626718	A3SS	0.5	50	50	ENSMUST00000172906.8	ENSMUSG00000035569.18	Ankrd11	chr8	protein_coding	ankyrin repeat domain 11
chr8	123629186	123635407	-	123627437	123635407	A3SS	0.33	50	50	ENSMUST00000172906.8	ENSMUSG00000035569.18	Ankrd11	chr8	protein_coding	ankyrin repeat domain 11
chr8	123658797	123701468	-	123642784	123701468	A3SS	0.5	50	50	ENSMUST00000172906.8	ENSMUSG00000035569.18	Ankrd11	chr8	protein_coding	ankyrin repeat domain 11
chr8	123629186	123635407	-	123626888	123635407	A3SS	0.33	50	50	ENSMUST00000098334.13	ENSMUSG00000035569.18	Ankrd11	chr8	protein_coding	ankyrin repeat domain 11
chr8	123626888	123635407	-	123626888	123627341	5pMXE	0.5	50	50	ENSMUST00000212337.2	ENSMUSG00000035569.18	Ankrd11	chr8	protein_coding	ankyrin repeat domain 11
chr8	123806278	123807376	+	123806278	123806708	3pMXE	0.5	50	50	ENSMUST00000142541.8	ENSMUSG00000000738.19	Spg7	chr8	protein_coding	SPG7, paraplegin matrix AAA peptidase subunit
chr8	123789773;123793314	123793212;123797119	+	123789773	123797119	cassetteExon	0.5	100	100	ENSMUST00000142541.8	ENSMUSG00000000738.19	Spg7	chr8	protein_coding	SPG7, paraplegin matrix AAA peptidase subunit
chr8	123792448	123797119	+	123789773	123797119	A5SS	0.33	50	50	ENSMUST00000142541.8	ENSMUSG00000000738.19	Spg7	chr8	protein_coding	SPG7, paraplegin matrix AAA peptidase subunit
chr8	123806278	123807376	+	123806278;123806870	123806708;123807376	ES	0.5	50	50	ENSMUST00000125975.8	ENSMUSG00000000738.19	Spg7	chr8	protein_coding	SPG7, paraplegin matrix AAA peptidase subunit
chr8	123815786	123818374	+	123815786;123816973	123816863;123818374	ES	0.5	50	50	ENSMUST00000125975.8	ENSMUSG00000000738.19	Spg7	chr8	protein_coding	SPG7, paraplegin matrix AAA peptidase subunit
chr8	123820486	123821897	+	123820486;123821379	123821213;123821897	ES	0.33	50	50	ENSMUST00000125975.8	ENSMUSG00000000738.19	Spg7	chr8	protein_coding	SPG7, paraplegin matrix AAA peptidase subunit
chr8	123807549;123810682	123810561;123814067	+	123807549	123814067	cassetteExon	0.5	100	100	ENSMUST00000125975.8	ENSMUSG00000000738.19	Spg7	chr8	protein_coding	SPG7, paraplegin matrix AAA peptidase subunit
chr8	123793314	123797115	+	123793314	123797119	A3SS	0.5	50	50	ENSMUST00000125975.8	ENSMUSG00000000738.19	Spg7	chr8	protein_coding	SPG7, paraplegin matrix AAA peptidase subunit
chr8	123815786	123816814	+	123815786	123816863	A3SS	0.33	50	50	ENSMUST00000125975.8	ENSMUSG00000000738.19	Spg7	chr8	protein_coding	SPG7, paraplegin matrix AAA peptidase subunit
chr8	123792448	123793212	+	123789773	123793212	A5SS	0.5	50	50	ENSMUST00000125975.8	ENSMUSG00000000738.19	Spg7	chr8	protein_coding	SPG7, paraplegin matrix AAA peptidase subunit
chr8	123792448	123797119	+	123793314	123797119	A5SS&ES	0.33	50	50	ENSMUST00000125975.8	ENSMUSG00000000738.19	Spg7	chr8	protein_coding	SPG7, paraplegin matrix AAA peptidase subunit
chr8	123821488	123821897	+	123821379	123821897	A5SS	0.33	50	50	ENSMUST00000125975.8	ENSMUSG00000000738.19	Spg7	chr8	protein_coding	SPG7, paraplegin matrix AAA peptidase subunit
chr8	123792448	123797119	+	123792448	123793212	A3SS&ES	0.5	50	50	ENSMUST00000149248.9	ENSMUSG00000000738.19	Spg7	chr8	protein_coding	SPG7, paraplegin matrix AAA peptidase subunit
chr8	123815786;123816973	123816814;123818374	+	123815786	123818374	cassetteExon	0.5	100	100	ENSMUST00000153285.9	ENSMUSG00000000738.19	Spg7	chr8	protein_coding	SPG7, paraplegin matrix AAA peptidase subunit
chr8	123792448;123793314	123793212;123797119	+	123792448	123797119	cassetteExon	0.5	100	100	ENSMUST00000128803.8	ENSMUSG00000000738.19	Spg7	chr8	protein_coding	SPG7, paraplegin matrix AAA peptidase subunit
chr8	123820486	123824133	+	123820486;123821974	123821897;123824133	ES	0.5	50	50	ENSMUST00000128234.8	ENSMUSG00000000738.19	Spg7	chr8	protein_coding	SPG7, paraplegin matrix AAA peptidase subunit
chr8	123820486;123821488	123821213;123821897	+	123820486	123821897	cassetteExon	0.5	100	100	ENSMUST00000128234.8	ENSMUSG00000000738.19	Spg7	chr8	protein_coding	SPG7, paraplegin matrix AAA peptidase subunit
chr8	123820486	123821213	+	123820486	123824133	A3SS	0.33	50	50	ENSMUST00000135991.2	ENSMUSG00000000738.19	Spg7	chr8	protein_coding	SPG7, paraplegin matrix AAA peptidase subunit
chr8	123820486	123821897	+	123821488	123821897	5pMXE	0.33	50	50	ENSMUST00000212364.2	ENSMUSG00000000738.19	Spg7	chr8	protein_coding	SPG7, paraplegin matrix AAA peptidase subunit
chr8	123853473	123853560	+	123853473	123854092	A3SS	0.5	50	50	ENSMUST00000037900.9	ENSMUSG00000034796.15	Cpne7	chr8	protein_coding	copine VII
chr8	123872261	123875049	-	123872261;123874884	123874790;123875049	ES	0.5	50	50	ENSMUST00000000755.15	ENSMUSG00000000739.15	Sult5a1	chr8	protein_coding	sulfotransferase family 5A, member 1
chr8	123876172;123880006	123879891;123884178	-	123876172	123884178	cassetteExon	0.5	100	100	ENSMUST00000000755.15	ENSMUSG00000000739.15	Sult5a1	chr8	protein_coding	sulfotransferase family 5A, member 1
chr8	123884341	123884927	-	123884326	123884927	A3SS	0.5	50	50	ENSMUST00000000755.15	ENSMUSG00000000739.15	Sult5a1	chr8	protein_coding	sulfotransferase family 5A, member 1
chr8	123872261	123875049	-	123874884	123875049	3pMXE	0.5	50	50	ENSMUST00000146007.2	ENSMUSG00000000739.15	Sult5a1	chr8	protein_coding	sulfotransferase family 5A, member 1
chr8	123920400	123920772	+	123913180	123920772	A5SS	0.5	50	50	ENSMUST00000019422.6	ENSMUSG00000019278.6	Dpep1	chr8	protein_coding	dipeptidase 1
chr8	123940053	123941053	+	123940053	123948557	A3SS	0.5	50	50	ENSMUST00000212523.2	ENSMUSG00000048478.8	Spata33	chr8	protein_coding	spermatogenesis associated 33
chr8	123939736	123939827	+	123939609	123939827	A5SS	0.5	50	50	ENSMUST00000212523.2	ENSMUSG00000048478.8	Spata33	chr8	protein_coding	spermatogenesis associated 33
chr8	123939976	123948557	+	123940053	123948557	A5SS	0.5	50	50	ENSMUST00000212523.2	ENSMUSG00000048478.8	Spata33	chr8	protein_coding	spermatogenesis associated 33
chr8	123939976	123948557	+	123939976	123941053	3pMXE	0.5	50	50	ENSMUST00000212892.2	ENSMUSG00000048478.8	Spata33	chr8	protein_coding	spermatogenesis associated 33
chr8	123940053	123941053	+	123939976	123941053	A5SS	0.5	50	50	ENSMUST00000212892.2	ENSMUSG00000048478.8	Spata33	chr8	protein_coding	spermatogenesis associated 33
chr8	123953756	123954399	+	123953756;123954264	123954162;123954399	ES	0.5	50	50	ENSMUST00000036880.8	ENSMUSG00000033862.8	Cdk10	chr8	protein_coding	cyclin-dependent kinase 10
chr8	123958151	123966213	+	123958151	123958373	3pMXE	0.5	50	50	ENSMUST00000036880.8	ENSMUSG00000033862.8	Cdk10	chr8	protein_coding	cyclin-dependent kinase 10
chr8	123953756;123954066	123954020;123954162	+	123953756	123954162	cassetteExon	0.5	100	100	ENSMUST00000036880.8	ENSMUSG00000033862.8	Cdk10	chr8	protein_coding	cyclin-dependent kinase 10
chr8	123951669	123953086	+	123951707	123953086	A5SS	0.5	50	50	ENSMUST00000036880.8	ENSMUSG00000033862.8	Cdk10	chr8	protein_coding	cyclin-dependent kinase 10
chr8	123954504	123955068	+	123954480	123955068	A5SS	0.5	50	50	ENSMUST00000036880.8	ENSMUSG00000033862.8	Cdk10	chr8	protein_coding	cyclin-dependent kinase 10
chr8	123955673	123955851	+	123955639	123955851	A5SS	0.5	50	50	ENSMUST00000036880.8	ENSMUSG00000033862.8	Cdk10	chr8	protein_coding	cyclin-dependent kinase 10
chr8	123953756;123954264	123954020;123954399	+	123953756	123954399	cassetteExon	0.5	100	100	ENSMUST00000212021.2	ENSMUSG00000033862.8	Cdk10	chr8	protein_coding	cyclin-dependent kinase 10
chr8	123960984	123962257	-	123957423	123962257	A3SS	0.5	50	50	ENSMUST00000211845.2	ENSMUSG00000033594.12	Spata2l	chr8	protein_coding	spermatogenesis associated 2-like
chr8	123962662	123962889	-	123962588	123962889	A3SS	0.5	50	50	ENSMUST00000098327.2	ENSMUSG00000033594.12	Spata2l	chr8	protein_coding	spermatogenesis associated 2-like
chr8	123962292	123966213	+	123958151	123966213	A5SS	0.5	50	50	ENSMUST00000211876.2	ENSMUSG00000110505.2	Gm45842	chr8	lncRNA	predicted gene 45842
chr8	123971949	123972683	-	123971949;123972451	123972246;123972683	ES	0.5	50	50	ENSMUST00000149490.8	ENSMUSG00000001062.19	Vps9d1	chr8	protein_coding	VPS9 domain containing 1
chr8	123970534	123971853	-	123970531	123971853	A3SS	0.5	50	50	ENSMUST00000149490.8	ENSMUSG00000001062.19	Vps9d1	chr8	protein_coding	VPS9 domain containing 1
chr8	123973358	123973464	-	123972812	123973464	A3SS	0.5	50	50	ENSMUST00000149490.8	ENSMUSG00000001062.19	Vps9d1	chr8	protein_coding	VPS9 domain containing 1
chr8	123974617	123974706	-	123974538	123974706	A3SS	0.5	50	50	ENSMUST00000149490.8	ENSMUSG00000001062.19	Vps9d1	chr8	protein_coding	VPS9 domain containing 1
chr8	123974810	123974893	-	123974793	123974893	A3SS	0.5	50	50	ENSMUST00000149490.8	ENSMUSG00000001062.19	Vps9d1	chr8	protein_coding	VPS9 domain containing 1
chr8	123971949	123972221	-	123971949	123972246	A5SS	0.33	50	50	ENSMUST00000149490.8	ENSMUSG00000001062.19	Vps9d1	chr8	protein_coding	VPS9 domain containing 1
chr8	123971949	123972683	-	123972451	123972683	A3SS	0.5	50	50	ENSMUST00000146136.8	ENSMUSG00000001062.19	Vps9d1	chr8	protein_coding	VPS9 domain containing 1
chr8	123971949	123972683	-	123971949;123972451	123972221;123972683	ES	0.5	50	50	ENSMUST00000117643.9	ENSMUSG00000001062.19	Vps9d1	chr8	protein_coding	VPS9 domain containing 1
chr8	123982749	123983158	+	123982749;123983069	123983023;123983158	ES	0.5	50	50	ENSMUST00000001092.15	ENSMUSG00000001065.16	Zfp276	chr8	protein_coding	zinc finger protein (C2H2 type) 276
chr8	123992170	123994244	+	123992170	123994339	A3SS	0.5	50	50	ENSMUST00000001092.15	ENSMUSG00000001065.16	Zfp276	chr8	protein_coding	zinc finger protein (C2H2 type) 276
chr8	123985096	123986170	+	123985128	123986170	A5SS	0.5	50	50	ENSMUST00000001092.15	ENSMUSG00000001065.16	Zfp276	chr8	protein_coding	zinc finger protein (C2H2 type) 276
chr8	123982749	123983023	+	123982749	123991555	A3SS	0.33	50	50	ENSMUST00000154450.3	ENSMUSG00000001065.16	Zfp276	chr8	protein_coding	zinc finger protein (C2H2 type) 276
chr8	123982749	123983158	+	123982749	123991555	A3SS	0.33	50	50	ENSMUST00000154450.3	ENSMUSG00000001065.16	Zfp276	chr8	protein_coding	zinc finger protein (C2H2 type) 276
chr8	123986253	123991555	+	123982749	123991555	A5SS	0.5	50	50	ENSMUST00000154450.3	ENSMUSG00000001065.16	Zfp276	chr8	protein_coding	zinc finger protein (C2H2 type) 276
chr8	124002043;124004702	124004569;124004999	-	124002043	124004999	cassetteExon	0.5	100	100	ENSMUST00000035495.15	ENSMUSG00000032815.17	Fanca	chr8	protein_coding	Fanconi anemia, complementation group A
chr8	123996201	123996599	-	123996101	123996599	A3SS	0.5	50	50	ENSMUST00000035495.15	ENSMUSG00000032815.17	Fanca	chr8	protein_coding	Fanconi anemia, complementation group A
chr8	124030733	124031031	-	124026859	124031031	A3SS	0.5	50	50	ENSMUST00000035495.15	ENSMUSG00000032815.17	Fanca	chr8	protein_coding	Fanconi anemia, complementation group A
chr8	123996101	123996671	-	123996101	123996599	A5SS	0.5	50	50	ENSMUST00000035495.15	ENSMUSG00000032815.17	Fanca	chr8	protein_coding	Fanconi anemia, complementation group A
chr8	124002043	124003289	-	124002043	124004999	A5SS	0.33	50	50	ENSMUST00000035495.15	ENSMUSG00000032815.17	Fanca	chr8	protein_coding	Fanconi anemia, complementation group A
chr8	124002043	124004999	-	124002043	124004569	5pMXE	0.33	50	50	ENSMUST00000126834.8	ENSMUSG00000032815.17	Fanca	chr8	protein_coding	Fanconi anemia, complementation group A
chr8	124002043	124003289	-	124002043	124004569	A5SS	0.33	50	50	ENSMUST00000126834.8	ENSMUSG00000032815.17	Fanca	chr8	protein_coding	Fanconi anemia, complementation group A
chr8	124002043	124004999	-	124004702	124004999	3pMXE	0.5	50	50	ENSMUST00000155279.2	ENSMUSG00000032815.17	Fanca	chr8	protein_coding	Fanconi anemia, complementation group A
chr8	124018212;124021931	124021745;124023033	-	124018212	124023033	cassetteExon	0.5	100	100	ENSMUST00000212953.2	ENSMUSG00000032815.17	Fanca	chr8	protein_coding	Fanconi anemia, complementation group A
chr8	124077169	124080758	+	124073422	124080758	A5SS	0.5	50	50	ENSMUST00000010298.7	ENSMUSG00000010154.8	Spire2	chr8	protein_coding	spire type actin nucleation factor 2
chr8	124108300	124110064	+	124108300;124109340	124109266;124110064	ES	0.5	50	50	ENSMUST00000212571.2	ENSMUSG00000001472.18	Tcf25	chr8	protein_coding	transcription factor 25 (basic helix-loop-helix)
chr8	124115386;124115576	124115492;124116404	+	124115386	124116404	cassetteExon	0.5	100	100	ENSMUST00000212571.2	ENSMUSG00000001472.18	Tcf25	chr8	protein_coding	transcription factor 25 (basic helix-loop-helix)
chr8	124115386	124116470	+	124115386	124116404	A3SS	0.33	50	50	ENSMUST00000212571.2	ENSMUSG00000001472.18	Tcf25	chr8	protein_coding	transcription factor 25 (basic helix-loop-helix)
chr8	124127436	124127797	+	124127436	124129889	A3SS	0.25	50	50	ENSMUST00000212571.2	ENSMUSG00000001472.18	Tcf25	chr8	protein_coding	transcription factor 25 (basic helix-loop-helix)
chr8	124127436	124127815	+	124127436	124129889	A3SS	0.25	50	50	ENSMUST00000212571.2	ENSMUSG00000001472.18	Tcf25	chr8	protein_coding	transcription factor 25 (basic helix-loop-helix)
chr8	124127436	124129886	+	124127436	124129889	A3SS	0.25	50	50	ENSMUST00000212571.2	ENSMUSG00000001472.18	Tcf25	chr8	protein_coding	transcription factor 25 (basic helix-loop-helix)
chr8	124127436	124127797	+	124127436	124129886	A3SS	0.25	50	50	ENSMUST00000108840.4	ENSMUSG00000001472.18	Tcf25	chr8	protein_coding	transcription factor 25 (basic helix-loop-helix)
chr8	124127436	124127815	+	124127436	124129886	A3SS	0.25	50	50	ENSMUST00000108840.4	ENSMUSG00000001472.18	Tcf25	chr8	protein_coding	transcription factor 25 (basic helix-loop-helix)
chr8	124127436	124127797	+	124127436	124127815	A3SS	0.25	50	50	ENSMUST00000057934.10	ENSMUSG00000001472.18	Tcf25	chr8	protein_coding	transcription factor 25 (basic helix-loop-helix)
chr8	124115386	124116470	+	124115386	124115492	A3SS&ES	0.33	50	50	ENSMUST00000211964.2	ENSMUSG00000001472.18	Tcf25	chr8	protein_coding	transcription factor 25 (basic helix-loop-helix)
chr8	124145789	124147351	+	124145789	124147346	A3SS	0.5	50	50	ENSMUST00000071134.4	ENSMUSG00000062380.5	Tubb3	chr8	protein_coding	tubulin, beta 3 class III
chr8	124169790	124174527	+	124150382	124174527	A5SS	0.14	50	50	ENSMUST00000212883.2	ENSMUSG00000001482.16	Def8	chr8	protein_coding	differentially expressed in FDCP 8
chr8	124170184	124174527	+	124150382	124174527	A5SS	0.14	50	50	ENSMUST00000212883.2	ENSMUSG00000001482.16	Def8	chr8	protein_coding	differentially expressed in FDCP 8
chr8	124172923	124174527	+	124150382	124174527	A5SS	0.14	50	50	ENSMUST00000212883.2	ENSMUSG00000001482.16	Def8	chr8	protein_coding	differentially expressed in FDCP 8
chr8	124173892	124174527	+	124150382	124174527	A5SS	0.14	50	50	ENSMUST00000212883.2	ENSMUSG00000001482.16	Def8	chr8	protein_coding	differentially expressed in FDCP 8
chr8	124174007	124174527	+	124150382	124174527	A5SS	0.14	50	50	ENSMUST00000212883.2	ENSMUSG00000001482.16	Def8	chr8	protein_coding	differentially expressed in FDCP 8
chr8	124174102	124174527	+	124150382	124174527	A5SS	0.14	50	50	ENSMUST00000212883.2	ENSMUSG00000001482.16	Def8	chr8	protein_coding	differentially expressed in FDCP 8
chr8	124169790;124172923	124172837;124174527	+	124169790	124174527	cassetteExon	0.5	100	100	ENSMUST00000093049.10	ENSMUSG00000001482.16	Def8	chr8	protein_coding	differentially expressed in FDCP 8
chr8	124169790;124172923	124172862;124174527	+	124169790	124174527	cassetteExon	0.5	100	100	ENSMUST00000093049.10	ENSMUSG00000001482.16	Def8	chr8	protein_coding	differentially expressed in FDCP 8
chr8	124169790;124174102	124174056;124174527	+	124169790	124174527	cassetteExon	0.5	100	100	ENSMUST00000093049.10	ENSMUSG00000001482.16	Def8	chr8	protein_coding	differentially expressed in FDCP 8
chr8	124170184	124174527	+	124169790	124174527	A5SS	0.14	50	50	ENSMUST00000093049.10	ENSMUSG00000001482.16	Def8	chr8	protein_coding	differentially expressed in FDCP 8
chr8	124173892	124174527	+	124169790	124174527	A5SS	0.14	50	50	ENSMUST00000093049.10	ENSMUSG00000001482.16	Def8	chr8	protein_coding	differentially expressed in FDCP 8
chr8	124174007	124174527	+	124169790	124174527	A5SS	0.14	50	50	ENSMUST00000093049.10	ENSMUSG00000001482.16	Def8	chr8	protein_coding	differentially expressed in FDCP 8
chr8	124169790;124174102	124174056;124174527	+	124169790;124172923	124172837;124174527	MXE	0.5	100	100	ENSMUST00000001522.10	ENSMUSG00000001482.16	Def8	chr8	protein_coding	differentially expressed in FDCP 8
chr8	124172923;124174102	124174056;124174527	+	124172923	124174527	cassetteExon	0.5	100	100	ENSMUST00000001522.10	ENSMUSG00000001482.16	Def8	chr8	protein_coding	differentially expressed in FDCP 8
chr8	124169790	124172862	+	124169790	124172837	A3SS	0.25	50	50	ENSMUST00000001522.10	ENSMUSG00000001482.16	Def8	chr8	protein_coding	differentially expressed in FDCP 8
chr8	124170184	124174527	+	124172923	124174527	A5SS&ES	0.16	50	50	ENSMUST00000001522.10	ENSMUSG00000001482.16	Def8	chr8	protein_coding	differentially expressed in FDCP 8
chr8	124173892	124174527	+	124172923	124174527	A5SS	0.16	50	50	ENSMUST00000001522.10	ENSMUSG00000001482.16	Def8	chr8	protein_coding	differentially expressed in FDCP 8
chr8	124174007	124174527	+	124172923	124174527	A5SS	0.16	50	50	ENSMUST00000001522.10	ENSMUSG00000001482.16	Def8	chr8	protein_coding	differentially expressed in FDCP 8
chr8	124169790;124172923	124172837;124174056	+	124169790	124174056	cassetteExon	0.5	100	100	ENSMUST00000124741.8	ENSMUSG00000001482.16	Def8	chr8	protein_coding	differentially expressed in FDCP 8
chr8	124169790;124172923	124172862;124174056	+	124169790	124174056	cassetteExon	0.5	100	100	ENSMUST00000124741.8	ENSMUSG00000001482.16	Def8	chr8	protein_coding	differentially expressed in FDCP 8
chr8	124169790;124172923	124172862;124174527	+	124169790;124174102	124174056;124174527	MXE	0.5	100	100	ENSMUST00000124741.8	ENSMUSG00000001482.16	Def8	chr8	protein_coding	differentially expressed in FDCP 8
chr8	124170184	124174527	+	124174102	124174527	A5SS&ES	0.16	50	50	ENSMUST00000124741.8	ENSMUSG00000001482.16	Def8	chr8	protein_coding	differentially expressed in FDCP 8
chr8	124173892	124174527	+	124174102	124174527	A5SS&ES	0.16	50	50	ENSMUST00000124741.8	ENSMUSG00000001482.16	Def8	chr8	protein_coding	differentially expressed in FDCP 8
chr8	124174007	124174527	+	124174102	124174527	A5SS&ES	0.16	50	50	ENSMUST00000124741.8	ENSMUSG00000001482.16	Def8	chr8	protein_coding	differentially expressed in FDCP 8
chr8	124173892	124174527	+	124170184	124174527	A5SS	0.14	50	50	ENSMUST00000108830.2	ENSMUSG00000001482.16	Def8	chr8	protein_coding	differentially expressed in FDCP 8
chr8	124174007	124174527	+	124170184	124174527	A5SS	0.14	50	50	ENSMUST00000108830.2	ENSMUSG00000001482.16	Def8	chr8	protein_coding	differentially expressed in FDCP 8
chr8	124174007	124174527	+	124173892	124174527	A5SS	0.14	50	50	ENSMUST00000212391.2	ENSMUSG00000001482.16	Def8	chr8	protein_coding	differentially expressed in FDCP 8
chr8	124207884	124212628	+	124207884;124211427	124211342;124212628	ES	0.5	50	50	ENSMUST00000001520.13	ENSMUSG00000031967.16	Afg3l1	chr8	protein_coding	AFG3-like AAA ATPase 1
chr8	124225437	124227972	+	124225437;124226846	124226731;124227972	ES	0.5	50	50	ENSMUST00000001520.13	ENSMUSG00000031967.16	Afg3l1	chr8	protein_coding	AFG3-like AAA ATPase 1
chr8	124233577	124236581	-	124232424	124236581	A3SS	0.33	50	50	ENSMUST00000176286.8	ENSMUSG00000031970.17	Dbndd1	chr8	protein_coding	dysbindin (dystrobrevin binding protein 1) domain containing 1
chr8	124235962	124236581	-	124232424	124236581	A3SS	0.33	50	50	ENSMUST00000176286.8	ENSMUSG00000031970.17	Dbndd1	chr8	protein_coding	dysbindin (dystrobrevin binding protein 1) domain containing 1
chr8	124233577;124235962	124235822;124236581	-	124233577	124236581	cassetteExon	0.5	100	100	ENSMUST00000177240.8	ENSMUSG00000031970.17	Dbndd1	chr8	protein_coding	dysbindin (dystrobrevin binding protein 1) domain containing 1
chr8	124555797	124557010	+	124555797	124556972	A3SS	0.5	50	50	ENSMUST00000118535.9	ENSMUSG00000019478.18	Rab4a	chr8	protein_coding	RAB4A, member RAS oncogene family
chr8	124620448;124621250	124621161;124621431	-	124620448	124621431	cassetteExon	0.5	100	100	ENSMUST00000034453.6	ENSMUSG00000031972.6	Acta1	chr8	protein_coding	actin, alpha 1, skeletal muscle
chr8	124679450	124684873	+	124679378	124684873	A5SS	0.5	50	50	ENSMUST00000212188.2	ENSMUSG00000110615.2	Gm45890	chr8	lncRNA	predicted gene 45890
chr8	124730440	124736428	-	124730440;124735034	124734930;124736428	ES	0.5	50	50	ENSMUST00000093039.6	ENSMUSG00000038697.16	Taf5l	chr8	protein_coding	TATA-box binding protein associated factor 5 like
chr8	124736572	124747928	-	124736572	124747600	5pMXE	0.5	50	50	ENSMUST00000093039.6	ENSMUSG00000038697.16	Taf5l	chr8	protein_coding	TATA-box binding protein associated factor 5 like
chr8	124761927	124763375	+	124761914	124763375	A5SS	0.5	50	50	ENSMUST00000173168.8	ENSMUSG00000031976.15	Urb2	chr8	protein_coding	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)
chr8	125022008	125022097	+	124958388	125022097	A5SS	0.33	50	50	ENSMUST00000034458.9	ENSMUSG00000089704.10	Galnt2	chr8	protein_coding	polypeptide N-acetylgalactosaminyltransferase 2
chr8	125032407	125050411	+	125032407	125059307	A3SS	0.5	50	50	ENSMUST00000142578.8	ENSMUSG00000089704.10	Galnt2	chr8	protein_coding	polypeptide N-acetylgalactosaminyltransferase 2
chr8	125058835	125059307	+	125032407	125059307	A5SS	0.5	50	50	ENSMUST00000142578.8	ENSMUSG00000089704.10	Galnt2	chr8	protein_coding	polypeptide N-acetylgalactosaminyltransferase 2
chr8	125111361	125166242	-	125111361	125160538	5pMXE	0.33	50	50	ENSMUST00000052580.10	ENSMUSG00000050751.15	Pgbd5	chr8	protein_coding	piggyBac transposable element derived 5
chr8	125101182	125102166	-	125101182	125102849	A5SS	0.5	50	50	ENSMUST00000052580.10	ENSMUSG00000050751.15	Pgbd5	chr8	protein_coding	piggyBac transposable element derived 5
chr8	125111361	125119929	-	125111361	125160538	A5SS	0.33	50	50	ENSMUST00000052580.10	ENSMUSG00000050751.15	Pgbd5	chr8	protein_coding	piggyBac transposable element derived 5
chr8	125111361	125119929	-	125111361	125166242	A5SS	0.33	50	50	ENSMUST00000172566.8	ENSMUSG00000050751.15	Pgbd5	chr8	protein_coding	piggyBac transposable element derived 5
chr8	125247690	125252408	+	125247690	125252370	A3SS	0.5	50	50	ENSMUST00000034460.11	ENSMUSG00000031979.18	Cog2	chr8	protein_coding	component of oligomeric golgi complex 2
chr8	125253904	125255717	+	125253904	125255715	A3SS	0.5	50	50	ENSMUST00000034460.11	ENSMUSG00000031979.18	Cog2	chr8	protein_coding	component of oligomeric golgi complex 2
chr8	125340628	125341203	+	125340628	125341287	A3SS	0.5	50	50	ENSMUST00000093033.6	ENSMUSG00000031981.8	Capn9	chr8	protein_coding	calpain 9
chr8	125302959	125315772	+	125303096	125315772	A5SS	0.5	50	50	ENSMUST00000093033.6	ENSMUSG00000031981.8	Capn9	chr8	protein_coding	calpain 9
chr8	125417098	125436642	-	125417098;125426460	125426395;125436642	ES	0.33	50	50	ENSMUST00000117624.9	ENSMUSG00000037300.20	Ttc13	chr8	protein_coding	tetratricopeptide repeat domain 13
chr8	125403186	125405741	-	125403189	125405741	A3SS	0.5	50	50	ENSMUST00000117624.9	ENSMUSG00000037300.20	Ttc13	chr8	protein_coding	tetratricopeptide repeat domain 13
chr8	125422491	125426395	-	125417098	125426395	A3SS	0.33	50	50	ENSMUST00000117624.9	ENSMUSG00000037300.20	Ttc13	chr8	protein_coding	tetratricopeptide repeat domain 13
chr8	125422491	125436642	-	125426460	125436642	A3SS&ES	0.33	50	50	ENSMUST00000117624.9	ENSMUSG00000037300.20	Ttc13	chr8	protein_coding	tetratricopeptide repeat domain 13
chr8	125424825	125426395	-	125417098	125426395	A3SS	0.33	50	50	ENSMUST00000117624.9	ENSMUSG00000037300.20	Ttc13	chr8	protein_coding	tetratricopeptide repeat domain 13
chr8	125417098	125421569	-	125417098	125426395	A5SS	0.33	50	50	ENSMUST00000117624.9	ENSMUSG00000037300.20	Ttc13	chr8	protein_coding	tetratricopeptide repeat domain 13
chr8	125422491	125436642	-	125417098	125436642	A3SS	0.33	50	50	ENSMUST00000231984.2	ENSMUSG00000037300.20	Ttc13	chr8	protein_coding	tetratricopeptide repeat domain 13
chr8	125417098	125421569	-	125417098	125436642	A5SS	0.33	50	50	ENSMUST00000231984.2	ENSMUSG00000037300.20	Ttc13	chr8	protein_coding	tetratricopeptide repeat domain 13
chr8	125422491	125426395	-	125422491;125424825	125424733;125426395	ES	0.33	50	50	ENSMUST00000214828.2	ENSMUSG00000037300.20	Ttc13	chr8	protein_coding	tetratricopeptide repeat domain 13
chr8	125417098;125426460	125426395;125436642	-	125417098;125422491	125421569;125436642	MXE	0.5	100	100	ENSMUST00000118134.3	ENSMUSG00000037300.20	Ttc13	chr8	protein_coding	tetratricopeptide repeat domain 13
chr8	125422491;125426460	125426395;125436642	-	125422491	125436642	cassetteExon	0.5	100	100	ENSMUST00000118134.3	ENSMUSG00000037300.20	Ttc13	chr8	protein_coding	tetratricopeptide repeat domain 13
chr8	125422491	125424733	-	125422491	125436642	A5SS	0.33	50	50	ENSMUST00000118134.3	ENSMUSG00000037300.20	Ttc13	chr8	protein_coding	tetratricopeptide repeat domain 13
chr8	125452114	125455108	+	125452114	125455068	A3SS	0.5	50	50	ENSMUST00000034463.4	ENSMUSG00000031982.6	Arv1	chr8	protein_coding	ARV1 homolog, fatty acid homeostasis modulator
chr8	125455221	125457578	+	125455221	125457531	A3SS	0.5	50	50	ENSMUST00000034463.4	ENSMUSG00000031982.6	Arv1	chr8	protein_coding	ARV1 homolog, fatty acid homeostasis modulator
chr8	125600218	125600958	+	125600248	125600958	A5SS	0.5	50	50	ENSMUST00000034466.10	ENSMUSG00000031985.10	Gnpat	chr8	protein_coding	glyceronephosphate O-acyltransferase
chr8	125628878	125629430	+	125628631	125629430	A5SS	0.5	50	50	ENSMUST00000034467.7	ENSMUSG00000031986.7	Sprtn	chr8	protein_coding	SprT-like N-terminal domain
chr8	125881849	125944836	+	125881849;125891920	125891732;125944836	ES	0.5	50	50	ENSMUST00000098311.11	ENSMUSG00000043051.18	Disc1	chr8	protein_coding	disrupted in schizophrenia 1
chr8	125781023;125801905	125801789;125814193	+	125781023	125814193	cassetteExon	0.5	100	100	ENSMUST00000098311.11	ENSMUSG00000043051.18	Disc1	chr8	protein_coding	disrupted in schizophrenia 1
chr8	125817181	125829346	+	125817181	125851232	A3SS	0.5	50	50	ENSMUST00000098311.11	ENSMUSG00000043051.18	Disc1	chr8	protein_coding	disrupted in schizophrenia 1
chr8	126149441	126159917	-	126149441;126149985	126149932;126159917	ES	0.5	50	50	ENSMUST00000108775.2	ENSMUSG00000001995.10	Sipa1l2	chr8	protein_coding	signal-induced proliferation-associated 1 like 2
chr8	126311913	126317598	+	126311913	126314617	3pMXE	0.25	50	50	ENSMUST00000212512.2	ENSMUSG00000110629.2	4930567H12Rik	chr8	lncRNA	RIKEN cDNA 4930567H12 gene
chr8	126311913	126342841	+	126311913	126314617	3pMXE	0.25	50	50	ENSMUST00000212512.2	ENSMUSG00000110629.2	4930567H12Rik	chr8	lncRNA	RIKEN cDNA 4930567H12 gene
chr8	126311913	126350995	+	126311913	126314617	3pMXE	0.25	50	50	ENSMUST00000212512.2	ENSMUSG00000110629.2	4930567H12Rik	chr8	lncRNA	RIKEN cDNA 4930567H12 gene
chr8	126311913	126350995	+	126311913	126342841	3pMXE	0.25	50	50	ENSMUST00000212260.2	ENSMUSG00000110629.2	4930567H12Rik	chr8	lncRNA	RIKEN cDNA 4930567H12 gene
chr8	126311913	126317598	+	126311913	126342841	A3SS	0.25	50	50	ENSMUST00000212260.2	ENSMUSG00000110629.2	4930567H12Rik	chr8	lncRNA	RIKEN cDNA 4930567H12 gene
chr8	126311913	126317598	+	126311913	126350995	A3SS	0.25	50	50	ENSMUST00000213085.2	ENSMUSG00000110629.2	4930567H12Rik	chr8	lncRNA	RIKEN cDNA 4930567H12 gene
chr8	126456801	126462807	+	126456801;126459970	126459845;126462807	ES	0.25	50	50	ENSMUST00000146055.8	ENSMUSG00000031851.15	Ntpcr	chr8	protein_coding	nucleoside-triphosphatase, cancer-related
chr8	126462969	126471975	+	126462969;126464158	126464062;126471975	ES	0.5	50	50	ENSMUST00000146055.8	ENSMUSG00000031851.15	Ntpcr	chr8	protein_coding	nucleoside-triphosphatase, cancer-related
chr8	126464158	126464794	+	126464158	126471975	A3SS	0.33	50	50	ENSMUST00000146055.8	ENSMUSG00000031851.15	Ntpcr	chr8	protein_coding	nucleoside-triphosphatase, cancer-related
chr8	126464158	126471979	+	126464158	126471975	A3SS	0.33	50	50	ENSMUST00000146055.8	ENSMUSG00000031851.15	Ntpcr	chr8	protein_coding	nucleoside-triphosphatase, cancer-related
chr8	126461088	126462807	+	126459970	126462807	A5SS	0.25	50	50	ENSMUST00000146055.8	ENSMUSG00000031851.15	Ntpcr	chr8	protein_coding	nucleoside-triphosphatase, cancer-related
chr8	126462625	126462807	+	126459970	126462807	A5SS	0.25	50	50	ENSMUST00000146055.8	ENSMUSG00000031851.15	Ntpcr	chr8	protein_coding	nucleoside-triphosphatase, cancer-related
chr8	126461088	126462807	+	126456801	126462807	A5SS	0.25	50	50	ENSMUST00000143504.8	ENSMUSG00000031851.15	Ntpcr	chr8	protein_coding	nucleoside-triphosphatase, cancer-related
chr8	126462625	126462807	+	126456801	126462807	A5SS	0.25	50	50	ENSMUST00000143504.8	ENSMUSG00000031851.15	Ntpcr	chr8	protein_coding	nucleoside-triphosphatase, cancer-related
chr8	126464158	126471979	+	126464158	126464794	3pMXE	0.33	50	50	ENSMUST00000151172.8	ENSMUSG00000031851.15	Ntpcr	chr8	protein_coding	nucleoside-triphosphatase, cancer-related
chr8	126456801	126462807	+	126459970	126462807	5pMXE	0.25	50	50	ENSMUST00000138656.2	ENSMUSG00000031851.15	Ntpcr	chr8	protein_coding	nucleoside-triphosphatase, cancer-related
chr8	126462969	126471975	+	126462969	126464062	A3SS&ES	0.5	50	50	ENSMUST00000138656.2	ENSMUSG00000031851.15	Ntpcr	chr8	protein_coding	nucleoside-triphosphatase, cancer-related
chr8	126462625	126462807	+	126461088	126462807	A5SS	0.25	50	50	ENSMUST00000034313.13	ENSMUSG00000031851.15	Ntpcr	chr8	protein_coding	nucleoside-triphosphatase, cancer-related
chr8	126618771	126624668	-	126587999	126624668	A3SS	0.5	50	50	ENSMUST00000187772.2	ENSMUSG00000060212.14	Pcnx2	chr8	protein_coding	pecanex homolog 2
chr8	126587999	126589825	-	126587999	126624668	A5SS	0.5	50	50	ENSMUST00000187772.2	ENSMUSG00000060212.14	Pcnx2	chr8	protein_coding	pecanex homolog 2
chr8	126866482	127108854	+	126866482;127048062	127047738;127108854	ES	0.5	50	50	ENSMUST00000238518.2	ENSMUSG00000057060.9	Slc35f3	chr8	protein_coding	solute carrier family 35, member F3
chr8	127025600	127047738	+	126866482	127047738	A5SS	0.5	50	50	ENSMUST00000238518.2	ENSMUSG00000057060.9	Slc35f3	chr8	protein_coding	solute carrier family 35, member F3
chr8	127571738	127634785	-	127571738	127603150	5pMXE	0.5	50	50	ENSMUST00000212406.2	ENSMUSG00000110697.2	Gm31718	chr8	lncRNA	predicted gene, 31718
chr8	127568003	127568296	-	127545884	127568296	A3SS	0.5	50	50	ENSMUST00000212639.2	ENSMUSG00000110697.2	Gm31718	chr8	lncRNA	predicted gene, 31718
chr8	127545884	127546928	-	127545884	127568296	A5SS	0.5	50	50	ENSMUST00000212639.2	ENSMUSG00000110697.2	Gm31718	chr8	lncRNA	predicted gene, 31718
chr8	127667975	127672354	-	127663932	127672354	A3SS	0.5	50	50	ENSMUST00000212771.2	ENSMUSG00000093904.3	Tomm20	chr8	protein_coding	translocase of outer mitochondrial membrane 20
chr8	127663932	127666622	-	127663932	127672354	A5SS	0.5	50	50	ENSMUST00000212771.2	ENSMUSG00000093904.3	Tomm20	chr8	protein_coding	translocase of outer mitochondrial membrane 20
chr8	127686335	127692132	-	127686335;127688721	127688662;127692132	ES	0.5	50	50	ENSMUST00000045994.8	ENSMUSG00000033931.10	Rbm34	chr8	protein_coding	RNA binding motif protein 34
chr8	128032989	128083756	+	128032989;128050653	128050522;128083756	ES	0.33	50	50	ENSMUST00000162309.8	ENSMUSG00000025812.19	Pard3	chr8	protein_coding	par-3 family cell polarity regulator
chr8	128083847	128096729	+	128083847;128086291	128086208;128096729	ES	0.5	50	50	ENSMUST00000162309.8	ENSMUSG00000025812.19	Pard3	chr8	protein_coding	par-3 family cell polarity regulator
chr8	128104795	128114991	+	128104795;128106984	128106946;128114991	ES	0.5	50	50	ENSMUST00000162309.8	ENSMUSG00000025812.19	Pard3	chr8	protein_coding	par-3 family cell polarity regulator
chr8	127791223;127867277	127867160;127887960	+	127791223	127887960	cassetteExon	0.5	100	100	ENSMUST00000162309.8	ENSMUSG00000025812.19	Pard3	chr8	protein_coding	par-3 family cell polarity regulator
chr8	127791223;128071541	128071490;128083756	+	127791223;128050653	127887960;128083756	MXE	0.5	100	100	ENSMUST00000162309.8	ENSMUSG00000025812.19	Pard3	chr8	protein_coding	par-3 family cell polarity regulator
chr8	128125231	128126879	+	128125231	128131856	A3SS	0.5	50	50	ENSMUST00000162309.8	ENSMUSG00000025812.19	Pard3	chr8	protein_coding	par-3 family cell polarity regulator
chr8	128153234	128159276	+	128153234	128186755	A3SS	0.5	50	50	ENSMUST00000162309.8	ENSMUSG00000025812.19	Pard3	chr8	protein_coding	par-3 family cell polarity regulator
chr8	127800036	127887960	+	127791223	127887960	A5SS	0.33	50	50	ENSMUST00000162309.8	ENSMUSG00000025812.19	Pard3	chr8	protein_coding	par-3 family cell polarity regulator
chr8	127898496	128003502	+	127888061	128003502	A5SS	0.5	50	50	ENSMUST00000162309.8	ENSMUSG00000025812.19	Pard3	chr8	protein_coding	par-3 family cell polarity regulator
chr8	128026284	128032811	+	128003682	128032811	A5SS	0.5	50	50	ENSMUST00000162309.8	ENSMUSG00000025812.19	Pard3	chr8	protein_coding	par-3 family cell polarity regulator
chr8	128125240	128131856	+	128125231	128131856	A5SS	0.5	50	50	ENSMUST00000162309.8	ENSMUSG00000025812.19	Pard3	chr8	protein_coding	par-3 family cell polarity regulator
chr8	128136098	128137210	+	128136185	128137210	A5SS	0.33	50	50	ENSMUST00000162309.8	ENSMUSG00000025812.19	Pard3	chr8	protein_coding	par-3 family cell polarity regulator
chr8	128136188	128137210	+	128136185	128137210	A5SS	0.33	50	50	ENSMUST00000162309.8	ENSMUSG00000025812.19	Pard3	chr8	protein_coding	par-3 family cell polarity regulator
chr8	128136188	128142051	+	128137254	128142051	A5SS&ES	0.5	50	50	ENSMUST00000162309.8	ENSMUSG00000025812.19	Pard3	chr8	protein_coding	par-3 family cell polarity regulator
chr8	128174287	128186755	+	128153234	128186755	A5SS	0.5	50	50	ENSMUST00000162309.8	ENSMUSG00000025812.19	Pard3	chr8	protein_coding	par-3 family cell polarity regulator
chr8	128306284	128319542	+	128201096	128319542	A5SS	0.5	50	50	ENSMUST00000162309.8	ENSMUSG00000025812.19	Pard3	chr8	protein_coding	par-3 family cell polarity regulator
chr8	128136188	128142051	+	128136188;128137254	128137210;128142051	ES	0.5	50	50	ENSMUST00000079777.12	ENSMUSG00000025812.19	Pard3	chr8	protein_coding	par-3 family cell polarity regulator
chr8	128136098	128137210	+	128136188	128137210	A5SS	0.33	50	50	ENSMUST00000079777.12	ENSMUSG00000025812.19	Pard3	chr8	protein_coding	par-3 family cell polarity regulator
chr8	128125240	128126879	+	128125231	128126879	A5SS	0.5	50	50	ENSMUST00000162907.8	ENSMUSG00000025812.19	Pard3	chr8	protein_coding	par-3 family cell polarity regulator
chr8	127791223;128071541	128071490;128083756	+	127791223;128032989	127887960;128083756	MXE	0.5	100	100	ENSMUST00000162536.8	ENSMUSG00000025812.19	Pard3	chr8	protein_coding	par-3 family cell polarity regulator
chr8	127800036	127887960	+	127867277	127887960	A5SS&ES	0.33	50	50	ENSMUST00000159141.8	ENSMUSG00000025812.19	Pard3	chr8	protein_coding	par-3 family cell polarity regulator
chr8	127791223	127867160	+	127791223	128071490	A3SS	0.33	50	50	ENSMUST00000159818.2	ENSMUSG00000025812.19	Pard3	chr8	protein_coding	par-3 family cell polarity regulator
chr8	127791223	127887960	+	127791223	128071490	A3SS	0.33	50	50	ENSMUST00000159818.2	ENSMUSG00000025812.19	Pard3	chr8	protein_coding	par-3 family cell polarity regulator
chr8	128032989	128083756	+	128071541	128083756	A5SS&ES	0.33	50	50	ENSMUST00000159818.2	ENSMUSG00000025812.19	Pard3	chr8	protein_coding	par-3 family cell polarity regulator
chr8	128050653	128083756	+	128071541	128083756	A5SS&ES	0.33	50	50	ENSMUST00000159818.2	ENSMUSG00000025812.19	Pard3	chr8	protein_coding	par-3 family cell polarity regulator
chr8	128136098	128137213	+	128136098	128137210	A3SS	0.5	50	50	ENSMUST00000162665.8	ENSMUSG00000025812.19	Pard3	chr8	protein_coding	par-3 family cell polarity regulator
chr8	128125240	128126879	+	128125240	128131856	A3SS	0.5	50	50	ENSMUST00000162602.8	ENSMUSG00000025812.19	Pard3	chr8	protein_coding	par-3 family cell polarity regulator
chr8	128083847	128096729	+	128083847	128086208	3pMXE	0.5	50	50	ENSMUST00000162035.2	ENSMUSG00000025812.19	Pard3	chr8	protein_coding	par-3 family cell polarity regulator
chr8	129433640	129439689	+	129433640;129436956	129436734;129439689	ES	0.5	50	50	ENSMUST00000090006.12	ENSMUSG00000025809.16	Itgb1	chr8	protein_coding	integrin beta 1 (fibronectin receptor beta)
chr8	129452667;129453544	129453464;129458504	+	129452667	129458504	cassetteExon	0.5	100	100	ENSMUST00000090006.12	ENSMUSG00000025809.16	Itgb1	chr8	protein_coding	integrin beta 1 (fibronectin receptor beta)
chr8	129433640	129439689	+	129433640	129436734	3pMXE	0.5	50	50	ENSMUST00000135281.2	ENSMUSG00000025809.16	Itgb1	chr8	protein_coding	integrin beta 1 (fibronectin receptor beta)
chr8	129516618	129523938	-	129516618;129523871	129523727;129523938	ES	0.5	50	50	ENSMUST00000217343.2	ENSMUSG00000025808.18	Ccdc7a	chr8	protein_coding	coiled-coil domain containing 7A
chr8	129460853;129461535	129461373;129463457	-	129460853	129463457	cassetteExon	0.5	100	100	ENSMUST00000217343.2	ENSMUSG00000025808.18	Ccdc7a	chr8	protein_coding	coiled-coil domain containing 7A
chr8	129463677;129465804	129465775;129472422	-	129463677	129472422	cassetteExon	0.5	100	100	ENSMUST00000217343.2	ENSMUSG00000025808.18	Ccdc7a	chr8	protein_coding	coiled-coil domain containing 7A
chr8	129788378	129791749	-	129788378;129789500	129789383;129791749	ES	0.5	50	50	ENSMUST00000214889.2	ENSMUSG00000025808.18	Ccdc7a	chr8	protein_coding	coiled-coil domain containing 7A
chr8	129772425	129774090	-	129754147	129774090	A3SS	0.5	50	50	ENSMUST00000214889.2	ENSMUSG00000025808.18	Ccdc7a	chr8	protein_coding	coiled-coil domain containing 7A
chr8	129793841	129798874	+	129793841	129811652	A3SS	0.5	50	50	ENSMUST00000108745.8	ENSMUSG00000056018.15	Ccdc7b	chr8	protein_coding	coiled-coil domain containing 7B
chr8	129811735	129828931	+	129811735	129859363	A3SS	0.5	50	50	ENSMUST00000108745.8	ENSMUSG00000056018.15	Ccdc7b	chr8	protein_coding	coiled-coil domain containing 7B
chr8	129802032	129811652	+	129793841	129811652	A5SS	0.5	50	50	ENSMUST00000108745.8	ENSMUSG00000056018.15	Ccdc7b	chr8	protein_coding	coiled-coil domain containing 7B
chr8	129857581	129859363	+	129811735	129859363	A5SS	0.5	50	50	ENSMUST00000108745.8	ENSMUSG00000056018.15	Ccdc7b	chr8	protein_coding	coiled-coil domain containing 7B
chr8	129860325	129863055	+	129859419	129863055	A5SS	0.5	50	50	ENSMUST00000108745.8	ENSMUSG00000056018.15	Ccdc7b	chr8	protein_coding	coiled-coil domain containing 7B
chr8	129870738	129872000	+	129864906	129872000	A5SS	0.5	50	50	ENSMUST00000108745.8	ENSMUSG00000056018.15	Ccdc7b	chr8	protein_coding	coiled-coil domain containing 7B
chr8	129907713	129910090	+	129907728	129910090	A5SS	0.5	50	50	ENSMUST00000108745.8	ENSMUSG00000056018.15	Ccdc7b	chr8	protein_coding	coiled-coil domain containing 7B
chr8	129850194	129857520	+	129837486	129857520	A5SS	0.33	50	50	ENSMUST00000140887.8	ENSMUSG00000056018.15	Ccdc7b	chr8	protein_coding	coiled-coil domain containing 7B
chr8	129799197	129836381	+	129799197	129801946	A3SS&ES	0.5	50	50	ENSMUST00000148234.8	ENSMUSG00000056018.15	Ccdc7b	chr8	protein_coding	coiled-coil domain containing 7B
chr8	129829038	129836381	+	129829038	129857520	A3SS	0.5	50	50	ENSMUST00000148234.8	ENSMUSG00000056018.15	Ccdc7b	chr8	protein_coding	coiled-coil domain containing 7B
chr8	129837486	129857520	+	129829038	129857520	A5SS	0.33	50	50	ENSMUST00000148234.8	ENSMUSG00000056018.15	Ccdc7b	chr8	protein_coding	coiled-coil domain containing 7B
chr8	129850194	129857520	+	129829038	129857520	A5SS	0.33	50	50	ENSMUST00000148234.8	ENSMUSG00000056018.15	Ccdc7b	chr8	protein_coding	coiled-coil domain containing 7B
chr8	129793841;129811735	129811652;129859363	+	129793841;129857581	129798874;129859363	MXE	0.5	100	100	ENSMUST00000026912.8	ENSMUSG00000056018.15	Ccdc7b	chr8	protein_coding	coiled-coil domain containing 7B
chr8	129829038	129836381	+	129799197	129836381	A5SS	0.5	50	50	ENSMUST00000026912.8	ENSMUSG00000056018.15	Ccdc7b	chr8	protein_coding	coiled-coil domain containing 7B
chr8	129944230	129948025	-	129944230;129946632	129946583;129948025	ES	0.5	50	50	ENSMUST00000190157.7	ENSMUSG00000071302.11	2610044O15Rik8	chr8	protein_coding	RIKEN cDNA 2610044O15 gene
chr8	129948431	129960790	-	129948431	129960386	5pMXE	0.5	50	50	ENSMUST00000190157.7	ENSMUSG00000071302.11	2610044O15Rik8	chr8	protein_coding	RIKEN cDNA 2610044O15 gene
chr8	129944230	129948025	-	129946632	129948025	3pMXE	0.5	50	50	ENSMUST00000186619.7	ENSMUSG00000071302.11	2610044O15Rik8	chr8	protein_coding	RIKEN cDNA 2610044O15 gene
chr8	129990205	129993966	+	129990205	130007504	A3SS	0.5	50	50	ENSMUST00000212180.2	ENSMUSG00000110605.2	Gm32856	chr8	lncRNA	predicted gene, 32856
chr9	3004107	3004572	+	3003697	3004572	A5SS	0.5	50	50	ENSMUST00000177722.8	ENSMUSG00000096385.8	Gm11168	chr9	protein_coding	predicted gene 11168
chr9	3005009	3005070	+	3004862	3005070	A5SS	0.5	50	50	ENSMUST00000177722.8	ENSMUSG00000096385.8	Gm11168	chr9	protein_coding	predicted gene 11168
chr9	3030886	3030947	+	3030652	3030947	A5SS	0.5	50	50	ENSMUST00000099051.11	ENSMUSG00000095891.8	Gm10717	chr9	protein_coding	predicted gene 10717
chr9	3338591	3344588	+	3338591;3343252	3343015;3344588	ES	0.5	50	50	ENSMUST00000212294.2	ENSMUSG00000025899.15	Alkbh8	chr9	protein_coding	alkB homolog 8, tRNA methyltransferase
chr9	3345876;3347908	3347804;3349420	+	3345876	3349420	cassetteExon	0.5	100	100	ENSMUST00000212294.2	ENSMUSG00000025899.15	Alkbh8	chr9	protein_coding	alkB homolog 8, tRNA methyltransferase
chr9	3345876	3347262	+	3345876	3349420	A3SS	0.33	50	50	ENSMUST00000212294.2	ENSMUSG00000025899.15	Alkbh8	chr9	protein_coding	alkB homolog 8, tRNA methyltransferase
chr9	3335594	3338456	+	3335250	3338456	A5SS	0.25	50	50	ENSMUST00000212294.2	ENSMUSG00000025899.15	Alkbh8	chr9	protein_coding	alkB homolog 8, tRNA methyltransferase
chr9	3335594	3343015	+	3338591	3343015	A5SS&ES	0.5	50	50	ENSMUST00000212294.2	ENSMUSG00000025899.15	Alkbh8	chr9	protein_coding	alkB homolog 8, tRNA methyltransferase
chr9	3335748	3338456	+	3335250	3338456	A5SS	0.25	50	50	ENSMUST00000212294.2	ENSMUSG00000025899.15	Alkbh8	chr9	protein_coding	alkB homolog 8, tRNA methyltransferase
chr9	3336831	3338456	+	3335250	3338456	A5SS	0.25	50	50	ENSMUST00000212294.2	ENSMUSG00000025899.15	Alkbh8	chr9	protein_coding	alkB homolog 8, tRNA methyltransferase
chr9	3379336	3382694	+	3369914	3382694	A5SS	0.5	50	50	ENSMUST00000212294.2	ENSMUSG00000025899.15	Alkbh8	chr9	protein_coding	alkB homolog 8, tRNA methyltransferase
chr9	3335594	3343015	+	3335594;3338591	3338456;3343015	ES	0.5	50	50	ENSMUST00000211884.2	ENSMUSG00000025899.15	Alkbh8	chr9	protein_coding	alkB homolog 8, tRNA methyltransferase
chr9	3338591	3344588	+	3338591	3343015	3pMXE	0.5	50	50	ENSMUST00000211884.2	ENSMUSG00000025899.15	Alkbh8	chr9	protein_coding	alkB homolog 8, tRNA methyltransferase
chr9	3335748	3338456	+	3335594	3338456	A5SS	0.25	50	50	ENSMUST00000211884.2	ENSMUSG00000025899.15	Alkbh8	chr9	protein_coding	alkB homolog 8, tRNA methyltransferase
chr9	3336831	3338456	+	3335594	3338456	A5SS	0.25	50	50	ENSMUST00000211884.2	ENSMUSG00000025899.15	Alkbh8	chr9	protein_coding	alkB homolog 8, tRNA methyltransferase
chr9	3345876	3347804	+	3345876;3347409	3347262;3347804	ES	0.5	50	50	ENSMUST00000212358.2	ENSMUSG00000025899.15	Alkbh8	chr9	protein_coding	alkB homolog 8, tRNA methyltransferase
chr9	3335748;3336831	3336743;3338456	+	3335748	3338456	cassetteExon	0.5	100	100	ENSMUST00000212358.2	ENSMUSG00000025899.15	Alkbh8	chr9	protein_coding	alkB homolog 8, tRNA methyltransferase
chr9	3347908	3349358	+	3347908	3349420	A3SS	0.5	50	50	ENSMUST00000212358.2	ENSMUSG00000025899.15	Alkbh8	chr9	protein_coding	alkB homolog 8, tRNA methyltransferase
chr9	3335594;3338591	3338456;3344588	+	3335594;3343252	3343015;3344588	MXE	0.5	100	100	ENSMUST00000212666.2	ENSMUSG00000025899.15	Alkbh8	chr9	protein_coding	alkB homolog 8, tRNA methyltransferase
chr9	3345876	3349420	+	3345876	3347804	A3SS&ES	0.33	50	50	ENSMUST00000212817.2	ENSMUSG00000025899.15	Alkbh8	chr9	protein_coding	alkB homolog 8, tRNA methyltransferase
chr9	4302631	4308694	-	4302631;4303215	4303094;4308694	ES	0.5	50	50	ENSMUST00000051589.9	ENSMUSG00000025894.12	Aasdhppt	chr9	protein_coding	aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase
chr9	4308919	4309288	-	4308919	4309254	A5SS	0.5	50	50	ENSMUST00000051589.9	ENSMUSG00000025894.12	Aasdhppt	chr9	protein_coding	aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase
chr9	4309934;4313806	4313702;4316827	+	4309934	4316827	cassetteExon	0.5	100	100	ENSMUST00000049648.9	ENSMUSG00000025893.9	Kbtbd3	chr9	protein_coding	kelch repeat and BTB (POZ) domain containing 3
chr9	4424454;4432887	4432773;4456005	-	4424454;4427144	4427030;4456005	MXE	0.5	100	100	ENSMUST00000063508.15	ENSMUSG00000025892.17	Gria4	chr9	protein_coding	glutamate receptor, ionotropic, AMPA4 (alpha 4)
chr9	4478852	4480178	-	4472218	4480178	A3SS	0.5	50	50	ENSMUST00000063508.15	ENSMUSG00000025892.17	Gria4	chr9	protein_coding	glutamate receptor, ionotropic, AMPA4 (alpha 4)
chr9	5298824	5299280	+	5298723	5299280	A5SS	0.5	50	50	ENSMUST00000027015.7	ENSMUSG00000025888.7	Casp1	chr9	protein_coding	caspase 1
chr9	5321512	5323625	+	5321512;5322917	5322820;5323625	ES	0.5	50	50	ENSMUST00000162846.8	ENSMUSG00000033538.14	Casp4	chr9	protein_coding	caspase 4, apoptosis-related cysteine peptidase
chr9	5308914	5321258	+	5308914	5321426	A3SS	0.5	50	50	ENSMUST00000162846.8	ENSMUSG00000033538.14	Casp4	chr9	protein_coding	caspase 4, apoptosis-related cysteine peptidase
chr9	5352845	5353623	+	5352845	5353634	A3SS	0.5	50	50	ENSMUST00000027009.11	ENSMUSG00000025887.11	Casp12	chr9	protein_coding	caspase 12
chr9	5346523	5348899	+	5346733	5348899	A5SS	0.5	50	50	ENSMUST00000027009.11	ENSMUSG00000025887.11	Casp12	chr9	protein_coding	caspase 12
chr9	6337441	6376895	+	6337441;6359917	6359703;6376895	ES	0.5	50	50	ENSMUST00000058692.9	ENSMUSG00000032006.16	Pdgfd	chr9	protein_coding	platelet-derived growth factor, D polypeptide
chr9	6168918	6288472	+	6168918	6288490	A3SS	0.5	50	50	ENSMUST00000058692.9	ENSMUSG00000032006.16	Pdgfd	chr9	protein_coding	platelet-derived growth factor, D polypeptide
chr9	7044428;7045369	7045349;7049083	-	7044428	7049083	cassetteExon	0.5	100	100	ENSMUST00000048417.13	ENSMUSG00000047193.17	Dync2h1	chr9	protein_coding	dynein cytoplasmic 2 heavy chain 1
chr9	7078009;7080399	7080343;7081004	-	7078009	7081004	cassetteExon	0.5	100	100	ENSMUST00000048417.13	ENSMUSG00000047193.17	Dync2h1	chr9	protein_coding	dynein cytoplasmic 2 heavy chain 1
chr9	7111571	7112048	-	7111592	7112048	A3SS	0.5	50	50	ENSMUST00000048417.13	ENSMUSG00000047193.17	Dync2h1	chr9	protein_coding	dynein cytoplasmic 2 heavy chain 1
chr9	7149656	7155081	-	7148740	7155081	A3SS	0.5	50	50	ENSMUST00000048417.13	ENSMUSG00000047193.17	Dync2h1	chr9	protein_coding	dynein cytoplasmic 2 heavy chain 1
chr9	7101187	7101305	-	7101187	7101492	A5SS	0.5	50	50	ENSMUST00000048417.13	ENSMUSG00000047193.17	Dync2h1	chr9	protein_coding	dynein cytoplasmic 2 heavy chain 1
chr9	7203555	7206720	+	7203555;7205400	7205298;7206720	ES	0.5	50	50	ENSMUST00000215683.2	ENSMUSG00000032002.11	Dcun1d5	chr9	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)
chr9	7205400	7206073	+	7205400	7206720	A3SS	0.5	50	50	ENSMUST00000215683.2	ENSMUSG00000032002.11	Dcun1d5	chr9	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)
chr9	7203555	7206720	+	7203555	7205298	3pMXE	0.5	50	50	ENSMUST00000216770.2	ENSMUSG00000032002.11	Dcun1d5	chr9	protein_coding	DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)
chr9	7347538	7348057	+	7347538	7348667	A3SS	0.25	50	50	ENSMUST00000120655.8	ENSMUSG00000049723.15	Mmp12	chr9	protein_coding	matrix metallopeptidase 12
chr9	7347538	7348527	+	7347538	7348667	A3SS	0.25	50	50	ENSMUST00000120655.8	ENSMUSG00000049723.15	Mmp12	chr9	protein_coding	matrix metallopeptidase 12
chr9	7347538	7348585	+	7347538	7348667	A3SS	0.25	50	50	ENSMUST00000120655.8	ENSMUSG00000049723.15	Mmp12	chr9	protein_coding	matrix metallopeptidase 12
chr9	7347538	7348057	+	7347538	7348585	A3SS	0.25	50	50	ENSMUST00000005950.12	ENSMUSG00000049723.15	Mmp12	chr9	protein_coding	matrix metallopeptidase 12
chr9	7347538	7348527	+	7347538	7348585	A3SS	0.25	50	50	ENSMUST00000005950.12	ENSMUSG00000049723.15	Mmp12	chr9	protein_coding	matrix metallopeptidase 12
chr9	7353049	7353446	+	7353049	7369165	A3SS	0.5	50	50	ENSMUST00000065079.6	ENSMUSG00000049723.15	Mmp12	chr9	protein_coding	matrix metallopeptidase 12
chr9	7347538	7348527	+	7347538	7348057	3pMXE	0.25	50	50	ENSMUST00000138220.2	ENSMUSG00000049723.15	Mmp12	chr9	protein_coding	matrix metallopeptidase 12
chr9	7573651	7577636	+	7573651;7577462	7577301;7577636	ES	0.5	50	50	ENSMUST00000120900.8	ENSMUSG00000070323.12	Mmp27	chr9	protein_coding	matrix metallopeptidase 27
chr9	7768341;7785327	7785212;7790843	+	7768341	7790843	cassetteExon	0.5	100	100	ENSMUST00000052865.16	ENSMUSG00000050912.16	Tmem123	chr9	protein_coding	transmembrane protein 123
chr9	7768341;7789386	7789301;7790843	+	7768341	7790843	cassetteExon	0.5	100	100	ENSMUST00000052865.16	ENSMUSG00000050912.16	Tmem123	chr9	protein_coding	transmembrane protein 123
chr9	7768341;7785327	7785212;7790843	+	7768341;7789386	7789301;7790843	MXE	0.5	100	100	ENSMUST00000136904.8	ENSMUSG00000050912.16	Tmem123	chr9	protein_coding	transmembrane protein 123
chr9	7835380	7836696	-	7835380	7836991	A5SS	0.5	50	50	ENSMUST00000190341.7	ENSMUSG00000057367.13	Birc2	chr9	protein_coding	baculoviral IAP repeat-containing 2
chr9	7861408	7873057	-	7861408	7872824	5pMXE	0.33	50	50	ENSMUST00000013949.15	ENSMUSG00000032000.18	Birc3	chr9	protein_coding	baculoviral IAP repeat-containing 3
chr9	7851087	7854368	-	7851172	7854368	A3SS	0.5	50	50	ENSMUST00000013949.15	ENSMUSG00000032000.18	Birc3	chr9	protein_coding	baculoviral IAP repeat-containing 3
chr9	7866518	7872824	-	7861408	7872824	A3SS	0.33	50	50	ENSMUST00000013949.15	ENSMUSG00000032000.18	Birc3	chr9	protein_coding	baculoviral IAP repeat-containing 3
chr9	7868928	7872824	-	7861408	7872824	A3SS	0.33	50	50	ENSMUST00000013949.15	ENSMUSG00000032000.18	Birc3	chr9	protein_coding	baculoviral IAP repeat-containing 3
chr9	7858780	7860318	-	7858780	7860264	A5SS	0.5	50	50	ENSMUST00000013949.15	ENSMUSG00000032000.18	Birc3	chr9	protein_coding	baculoviral IAP repeat-containing 3
chr9	7861408	7872991	-	7861408	7872824	A5SS	0.33	50	50	ENSMUST00000013949.15	ENSMUSG00000032000.18	Birc3	chr9	protein_coding	baculoviral IAP repeat-containing 3
chr9	7861408	7872991	-	7861408	7873057	A5SS	0.33	50	50	ENSMUST00000159323.2	ENSMUSG00000032000.18	Birc3	chr9	protein_coding	baculoviral IAP repeat-containing 3
chr9	7868928	7872824	-	7866518	7872824	A3SS	0.33	50	50	ENSMUST00000161099.2	ENSMUSG00000032000.18	Birc3	chr9	protein_coding	baculoviral IAP repeat-containing 3
chr9	7938539;7939153	7939141;7952954	-	7938539	7952954	cassetteExon	0.5	100	100	ENSMUST00000086580.12	ENSMUSG00000053110.14	Yap1	chr9	protein_coding	yes-associated protein 1
chr9	7938539;7939165	7939141;7952954	-	7938539	7952954	cassetteExon	0.5	100	100	ENSMUST00000086580.12	ENSMUSG00000053110.14	Yap1	chr9	protein_coding	yes-associated protein 1
chr9	7938539;7950540	7950493;7952954	-	7938539	7952954	cassetteExon	0.5	100	100	ENSMUST00000086580.12	ENSMUSG00000053110.14	Yap1	chr9	protein_coding	yes-associated protein 1
chr9	7953135	7962284	-	7953135	7962290	A5SS	0.5	50	50	ENSMUST00000086580.12	ENSMUSG00000053110.14	Yap1	chr9	protein_coding	yes-associated protein 1
chr9	7962403	7965642	-	7962403	7973797	A5SS	0.5	50	50	ENSMUST00000086580.12	ENSMUSG00000053110.14	Yap1	chr9	protein_coding	yes-associated protein 1
chr9	8001708	8003452	-	8001708	8004116	A5SS	0.33	50	50	ENSMUST00000086580.12	ENSMUSG00000053110.14	Yap1	chr9	protein_coding	yes-associated protein 1
chr9	8001708	8003649	-	8001708	8004116	A5SS	0.33	50	50	ENSMUST00000086580.12	ENSMUSG00000053110.14	Yap1	chr9	protein_coding	yes-associated protein 1
chr9	7938539;7939153	7939141;7950493	-	7938539	7950493	cassetteExon	0.5	100	100	ENSMUST00000065353.13	ENSMUSG00000053110.14	Yap1	chr9	protein_coding	yes-associated protein 1
chr9	7938539;7939153	7939141;7952954	-	7938539;7950540	7950493;7952954	MXE	0.5	100	100	ENSMUST00000065353.13	ENSMUSG00000053110.14	Yap1	chr9	protein_coding	yes-associated protein 1
chr9	7938539;7939165	7939141;7952954	-	7938539;7950540	7950493;7952954	MXE	0.5	100	100	ENSMUST00000065353.13	ENSMUSG00000053110.14	Yap1	chr9	protein_coding	yes-associated protein 1
chr9	7939153	7952954	-	7939153;7950540	7950493;7952954	ES	0.25	50	50	ENSMUST00000173264.8	ENSMUSG00000053110.14	Yap1	chr9	protein_coding	yes-associated protein 1
chr9	7939165	7952954	-	7950540	7952954	A3SS&ES	0.25	50	50	ENSMUST00000173264.8	ENSMUSG00000053110.14	Yap1	chr9	protein_coding	yes-associated protein 1
chr9	7939165	7952954	-	7939153	7952954	A3SS	0.25	50	50	ENSMUST00000173085.8	ENSMUSG00000053110.14	Yap1	chr9	protein_coding	yes-associated protein 1
chr9	8001708	8003649	-	8001708	8003452	A5SS	0.33	50	50	ENSMUST00000173227.8	ENSMUSG00000053110.14	Yap1	chr9	protein_coding	yes-associated protein 1
chr9	8027268	8037461	-	8022545	8037461	A3SS	0.5	50	50	ENSMUST00000215478.2	ENSMUSG00000053070.6	Cfap300	chr9	protein_coding	cilia and flagella associated protein 300
chr9	8022545	8023901	-	8022545	8037461	A5SS	0.5	50	50	ENSMUST00000215478.2	ENSMUSG00000053070.6	Cfap300	chr9	protein_coding	cilia and flagella associated protein 300
chr9	8103517	8112081	-	8103517;8105789	8104654;8112081	ES	0.5	50	50	ENSMUST00000238782.2	ENSMUSG00000040729.9	Cep126	chr9	protein_coding	centrosomal protein 126
chr9	8078359	8079496	-	8076947	8079496	A3SS	0.5	50	50	ENSMUST00000238782.2	ENSMUSG00000040729.9	Cep126	chr9	protein_coding	centrosomal protein 126
chr9	8105789	8112081	-	8103517	8112081	A3SS	0.5	50	50	ENSMUST00000037397.8	ENSMUSG00000040729.9	Cep126	chr9	protein_coding	centrosomal protein 126
chr9	8103517	8104654	-	8103517	8112081	A5SS	0.5	50	50	ENSMUST00000037397.8	ENSMUSG00000040729.9	Cep126	chr9	protein_coding	centrosomal protein 126
chr9	8643723	8652937	+	8643723;8649532	8649299;8652937	ES	0.5	50	50	ENSMUST00000050433.8	ENSMUSG00000031997.10	Trpc6	chr9	protein_coding	transient receptor potential cation channel, subfamily C, member 6
chr9	8723802	8740737	-	8720805	8740737	A3SS	0.5	50	50	ENSMUST00000215328.2	ENSMUSG00000111602.2	Gm32014	chr9	lncRNA	predicted gene, 32014
chr9	9059160;9075011	9074910;9115691	-	9059160	9115691	cassetteExon	0.5	100	100	ENSMUST00000093893.12	ENSMUSG00000050730.18	Arhgap42	chr9	protein_coding	Rho GTPase activating protein 42
chr9	9148255	9155304	-	9115762	9155304	A3SS	0.5	50	50	ENSMUST00000093893.12	ENSMUSG00000050730.18	Arhgap42	chr9	protein_coding	Rho GTPase activating protein 42
chr9	10172127	10419041	-	10048891	10419041	A3SS	0.5	50	50	ENSMUST00000162484.8	ENSMUSG00000039488.16	Cntn5	chr9	protein_coding	contactin 5
chr9	10048891	10090163	-	10048891	10419041	A5SS	0.5	50	50	ENSMUST00000162484.8	ENSMUSG00000039488.16	Cntn5	chr9	protein_coding	contactin 5
chr9	10640827	10904365	-	10640827	10904490	A5SS	0.5	50	50	ENSMUST00000162484.8	ENSMUSG00000039488.16	Cntn5	chr9	protein_coding	contactin 5
chr9	13091596;13095274	13095062;13097148	-	13091596	13097148	cassetteExon	0.5	100	100	ENSMUST00000215337.2	ENSMUSG00000111830.2	4930568E12Rik	chr9	lncRNA	RIKEN cDNA 4930568E12 gene
chr9	13097271	13105742	-	13097271	13105772	A5SS	0.5	50	50	ENSMUST00000215337.2	ENSMUSG00000111830.2	4930568E12Rik	chr9	lncRNA	RIKEN cDNA 4930568E12 gene
chr9	13246676	13252851	+	13246676;13252423	13251696;13252851	ES	0.5	50	50	ENSMUST00000217444.4	ENSMUSG00000079084.13	Ccdc82	chr9	protein_coding	coiled-coil domain containing 82
chr9	13246676;13248967	13248884;13251696	+	13246676	13251696	cassetteExon	0.5	100	100	ENSMUST00000217444.4	ENSMUSG00000079084.13	Ccdc82	chr9	protein_coding	coiled-coil domain containing 82
chr9	13246676	13248884	+	13246676	13252851	A3SS	0.33	50	50	ENSMUST00000239561.1	ENSMUSG00000079084.13	Ccdc82	chr9	protein_coding	coiled-coil domain containing 82
chr9	13246676	13251696	+	13246676	13252851	A3SS	0.33	50	50	ENSMUST00000239561.1	ENSMUSG00000079084.13	Ccdc82	chr9	protein_coding	coiled-coil domain containing 82
chr9	13252423	13252851	+	13246676	13252851	A5SS	0.5	50	50	ENSMUST00000239561.1	ENSMUSG00000079084.13	Ccdc82	chr9	protein_coding	coiled-coil domain containing 82
chr9	13573949	13608470	+	13532971	13608470	A5SS	0.5	50	50	ENSMUST00000159294.9	ENSMUSG00000031925.18	Maml2	chr9	protein_coding	mastermind like transcriptional coactivator 2
chr9	13660696;13671784	13671714;13693573	+	13660696	13693573	cassetteExon	0.5	100	100	ENSMUST00000034396.14	ENSMUSG00000031918.17	Mtmr2	chr9	protein_coding	myotubularin related protein 2
chr9	13693678;13695006	13694902;13697148	+	13693678	13697148	cassetteExon	0.5	100	100	ENSMUST00000034396.14	ENSMUSG00000031918.17	Mtmr2	chr9	protein_coding	myotubularin related protein 2
chr9	13677420	13693573	+	13660696	13693573	A5SS	0.25	50	50	ENSMUST00000034396.14	ENSMUSG00000031918.17	Mtmr2	chr9	protein_coding	myotubularin related protein 2
chr9	13678180	13693573	+	13660696	13693573	A5SS	0.25	50	50	ENSMUST00000034396.14	ENSMUSG00000031918.17	Mtmr2	chr9	protein_coding	myotubularin related protein 2
chr9	13677420	13693573	+	13671784	13693573	A5SS	0.25	50	50	ENSMUST00000155679.8	ENSMUSG00000031918.17	Mtmr2	chr9	protein_coding	myotubularin related protein 2
chr9	13678180	13693573	+	13671784	13693573	A5SS	0.25	50	50	ENSMUST00000155679.8	ENSMUSG00000031918.17	Mtmr2	chr9	protein_coding	myotubularin related protein 2
chr9	13693678	13697148	+	13693678	13694902	3pMXE	0.5	50	50	ENSMUST00000136735.8	ENSMUSG00000031918.17	Mtmr2	chr9	protein_coding	myotubularin related protein 2
chr9	13678180	13693573	+	13677420	13693573	A5SS	0.25	50	50	ENSMUST00000152532.8	ENSMUSG00000031918.17	Mtmr2	chr9	protein_coding	myotubularin related protein 2
chr9	13721300;13722158	13721923;13723929	-	13721300	13723929	cassetteExon	0.5	100	100	ENSMUST00000142494.8	ENSMUSG00000031922.13	Cep57	chr9	protein_coding	centrosomal protein 57
chr9	13721300;13722158	13721923;13724706	-	13721300;13724006	13723929;13724706	MXE	0.5	100	100	ENSMUST00000142494.8	ENSMUSG00000031922.13	Cep57	chr9	protein_coding	centrosomal protein 57
chr9	13724810	13727351	-	13724816	13727351	A3SS	0.5	50	50	ENSMUST00000142494.8	ENSMUSG00000031922.13	Cep57	chr9	protein_coding	centrosomal protein 57
chr9	13727428	13728113	-	13727428	13728183	A5SS	0.5	50	50	ENSMUST00000142494.8	ENSMUSG00000031922.13	Cep57	chr9	protein_coding	centrosomal protein 57
chr9	13729740	13729884	-	13729740	13730155	A5SS	0.5	50	50	ENSMUST00000142494.8	ENSMUSG00000031922.13	Cep57	chr9	protein_coding	centrosomal protein 57
chr9	13732979	13737838	-	13732979	13738152	A5SS	0.5	50	50	ENSMUST00000142494.8	ENSMUSG00000031922.13	Cep57	chr9	protein_coding	centrosomal protein 57
chr9	13722158	13724706	-	13722158;13724006	13723929;13724706	ES	0.5	50	50	ENSMUST00000034398.12	ENSMUSG00000031922.13	Cep57	chr9	protein_coding	centrosomal protein 57
chr9	13721300	13723929	-	13722158	13723929	3pMXE	0.5	50	50	ENSMUST00000151878.2	ENSMUSG00000031922.13	Cep57	chr9	protein_coding	centrosomal protein 57
chr9	13751037	13765942	+	13751037	13755325	3pMXE	0.5	50	50	ENSMUST00000059579.12	ENSMUSG00000037808.14	Fam76b	chr9	protein_coding	family with sequence similarity 76, member B
chr9	13747479;13748012	13747955;13748133	+	13747479	13748133	cassetteExon	0.5	100	100	ENSMUST00000059579.12	ENSMUSG00000037808.14	Fam76b	chr9	protein_coding	family with sequence similarity 76, member B
chr9	14016495	14020564	+	14016495	14027899	A3SS	0.5	50	50	ENSMUST00000216531.2	ENSMUSG00000111489.2	1700019J19Rik	chr9	lncRNA	RIKEN cDNA 1700019J19 gene
chr9	14001840	14004943	+	14001757	14004943	A5SS	0.5	50	50	ENSMUST00000216531.2	ENSMUSG00000111489.2	1700019J19Rik	chr9	lncRNA	RIKEN cDNA 1700019J19 gene
chr9	14015828	14016300	+	14005104	14016300	A5SS	0.5	50	50	ENSMUST00000216531.2	ENSMUSG00000111489.2	1700019J19Rik	chr9	lncRNA	RIKEN cDNA 1700019J19 gene
chr9	14015257	14015738	+	14014545	14015738	A5SS	0.5	50	50	ENSMUST00000213583.2	ENSMUSG00000111489.2	1700019J19Rik	chr9	lncRNA	RIKEN cDNA 1700019J19 gene
chr9	14219954;14221726	14221544;14225792	+	14219954	14225792	cassetteExon	0.5	100	100	ENSMUST00000209187.2	ENSMUSG00000032009.9	Sesn3	chr9	protein_coding	sestrin 3
chr9	14187925	14217495	+	14186733	14217495	A5SS	0.5	50	50	ENSMUST00000209187.2	ENSMUSG00000032009.9	Sesn3	chr9	protein_coding	sestrin 3
chr9	14219843	14231591	+	14227536	14231591	A5SS&ES	0.5	50	50	ENSMUST00000209187.2	ENSMUSG00000032009.9	Sesn3	chr9	protein_coding	sestrin 3
chr9	14290904	14291967	-	14269183	14291967	A3SS	0.5	50	50	ENSMUST00000167549.2	ENSMUSG00000037419.10	Endod1	chr9	protein_coding	endonuclease domain containing 1
chr9	14376163;14396988	14396823;14411404	-	14376163	14411404	cassetteExon	0.5	100	100	ENSMUST00000058796.7	ENSMUSG00000053914.10	Kdm4d	chr9	protein_coding	lysine (K)-specific demethylase 4D
chr9	14412039	14413212	+	14412077	14413212	A5SS	0.33	50	50	ENSMUST00000004200.9	ENSMUSG00000004096.10	Cwc15	chr9	protein_coding	CWC15 spliceosome-associated protein
chr9	14412597	14413212	+	14412077	14413212	A5SS	0.33	50	50	ENSMUST00000004200.9	ENSMUSG00000004096.10	Cwc15	chr9	protein_coding	CWC15 spliceosome-associated protein
chr9	14412597	14413212	+	14412039	14413212	A5SS	0.33	50	50	ENSMUST00000213913.2	ENSMUSG00000004096.10	Cwc15	chr9	protein_coding	CWC15 spliceosome-associated protein
chr9	14507896	14526497	-	14507896	14526030	5pMXE	0.25	50	50	ENSMUST00000013220.8	ENSMUSG00000013076.18	Amotl1	chr9	protein_coding	angiomotin-like 1
chr9	14507896	14545198	-	14507896	14526030	5pMXE	0.25	50	50	ENSMUST00000013220.8	ENSMUSG00000013076.18	Amotl1	chr9	protein_coding	angiomotin-like 1
chr9	14507896	14525768	-	14507896	14526030	A5SS	0.25	50	50	ENSMUST00000013220.8	ENSMUSG00000013076.18	Amotl1	chr9	protein_coding	angiomotin-like 1
chr9	14545248	14556216	-	14545248	14554748	5pMXE	0.5	50	50	ENSMUST00000160770.9	ENSMUSG00000013076.18	Amotl1	chr9	protein_coding	angiomotin-like 1
chr9	14507896	14525768	-	14507896	14545198	A5SS	0.25	50	50	ENSMUST00000160770.9	ENSMUSG00000013076.18	Amotl1	chr9	protein_coding	angiomotin-like 1
chr9	14507896	14526497	-	14507896	14545198	A5SS	0.25	50	50	ENSMUST00000160770.9	ENSMUSG00000013076.18	Amotl1	chr9	protein_coding	angiomotin-like 1
chr9	14507896	14525768	-	14507896	14526497	A5SS	0.25	50	50	ENSMUST00000162901.8	ENSMUSG00000013076.18	Amotl1	chr9	protein_coding	angiomotin-like 1
chr9	14555956	14556906	+	14555829	14556906	A5SS	0.5	50	50	ENSMUST00000214010.2	ENSMUSG00000111198.2	Gm34263	chr9	lncRNA	predicted gene, 34263
chr9	14614468	14616202	-	14614468;14615014	14614886;14616202	ES	0.5	50	50	ENSMUST00000136399.8	ENSMUSG00000036912.19	Piwil4	chr9	protein_coding	piwi-like RNA-mediated gene silencing 4
chr9	14613770	14614321	-	14611569	14614321	A3SS	0.5	50	50	ENSMUST00000136399.8	ENSMUSG00000036912.19	Piwil4	chr9	protein_coding	piwi-like RNA-mediated gene silencing 4
chr9	14626323;14627506	14627317;14629532	-	14626323;14627135	14627024;14629532	MXE	0.5	100	100	ENSMUST00000115644.10	ENSMUSG00000036912.19	Piwil4	chr9	protein_coding	piwi-like RNA-mediated gene silencing 4
chr9	14638774	14639940	-	14638822	14639940	A3SS	0.5	50	50	ENSMUST00000115644.10	ENSMUSG00000036912.19	Piwil4	chr9	protein_coding	piwi-like RNA-mediated gene silencing 4
chr9	14668013	14669642	-	14668013	14669619	A5SS	0.33	50	50	ENSMUST00000191167.2	ENSMUSG00000031927.10	1700012B09Rik	chr9	protein_coding	RIKEN cDNA 1700012B09 gene
chr9	14668013	14669680	-	14668013	14669619	A5SS	0.33	50	50	ENSMUST00000191167.2	ENSMUSG00000031927.10	1700012B09Rik	chr9	protein_coding	RIKEN cDNA 1700012B09 gene
chr9	14669751	14672918	-	14669751	14672901	A5SS	0.5	50	50	ENSMUST00000191167.2	ENSMUSG00000031927.10	1700012B09Rik	chr9	protein_coding	RIKEN cDNA 1700012B09 gene
chr9	14668013	14669680	-	14668013	14669642	A5SS	0.33	50	50	ENSMUST00000188350.7	ENSMUSG00000031927.10	1700012B09Rik	chr9	protein_coding	RIKEN cDNA 1700012B09 gene
chr9	14694258	14695536	-	14694258	14695816	A5SS	0.33	50	50	ENSMUST00000216372.2	ENSMUSG00000031931.5	Ankrd49	chr9	protein_coding	ankyrin repeat domain 49
chr9	14694258	14695757	-	14694258	14695816	A5SS	0.33	50	50	ENSMUST00000216372.2	ENSMUSG00000031931.5	Ankrd49	chr9	protein_coding	ankyrin repeat domain 49
chr9	14694258	14695536	-	14694258	14695757	A5SS	0.33	50	50	ENSMUST00000216037.2	ENSMUSG00000031931.5	Ankrd49	chr9	protein_coding	ankyrin repeat domain 49
chr9	14710966	14716652	+	14710966;14714245	14714060;14716652	ES	0.5	50	50	ENSMUST00000034405.11	ENSMUSG00000031928.16	Mre11a	chr9	protein_coding	MRE11A homolog A, double strand break repair nuclease
chr9	14716823	14723126	+	14716823;14721180	14721100;14723126	ES	0.5	50	50	ENSMUST00000034405.11	ENSMUSG00000031928.16	Mre11a	chr9	protein_coding	MRE11A homolog A, double strand break repair nuclease
chr9	14714245	14715061	+	14714245	14716652	A3SS	0.5	50	50	ENSMUST00000034405.11	ENSMUSG00000031928.16	Mre11a	chr9	protein_coding	MRE11A homolog A, double strand break repair nuclease
chr9	14696103	14696727	+	14696053	14696727	A5SS	0.33	50	50	ENSMUST00000034405.11	ENSMUSG00000031928.16	Mre11a	chr9	protein_coding	MRE11A homolog A, double strand break repair nuclease
chr9	14696328	14696727	+	14696053	14696727	A5SS	0.33	50	50	ENSMUST00000034405.11	ENSMUSG00000031928.16	Mre11a	chr9	protein_coding	MRE11A homolog A, double strand break repair nuclease
chr9	14696328	14696727	+	14696103	14696727	A5SS	0.33	50	50	ENSMUST00000147305.2	ENSMUSG00000031928.16	Mre11a	chr9	protein_coding	MRE11A homolog A, double strand break repair nuclease
chr9	14772216	14778145	+	14772216;14776193	14776068;14778145	ES	0.5	50	50	ENSMUST00000034408.12	ENSMUSG00000031932.15	Gpr83	chr9	protein_coding	G protein-coupled receptor 83
chr9	14813819;14814679	14814588;14815009	-	14813819	14815009	cassetteExon	0.5	100	100	ENSMUST00000069408.10	ENSMUSG00000031933.18	Izumo1r	chr9	protein_coding	IZUMO1 receptor, JUNO
chr9	14805418	14812029	-	14797640	14812029	A3SS	0.25	50	50	ENSMUST00000069408.10	ENSMUSG00000031933.18	Izumo1r	chr9	protein_coding	IZUMO1 receptor, JUNO
chr9	14811536	14812029	-	14797640	14812029	A3SS	0.25	50	50	ENSMUST00000069408.10	ENSMUSG00000031933.18	Izumo1r	chr9	protein_coding	IZUMO1 receptor, JUNO
chr9	14811920	14812029	-	14797640	14812029	A3SS	0.25	50	50	ENSMUST00000069408.10	ENSMUSG00000031933.18	Izumo1r	chr9	protein_coding	IZUMO1 receptor, JUNO
chr9	14811536	14812029	-	14805418	14812029	A3SS	0.33	50	50	ENSMUST00000117620.8	ENSMUSG00000031933.18	Izumo1r	chr9	protein_coding	IZUMO1 receptor, JUNO
chr9	14811920	14812029	-	14805418	14812029	A3SS	0.33	50	50	ENSMUST00000117620.8	ENSMUSG00000031933.18	Izumo1r	chr9	protein_coding	IZUMO1 receptor, JUNO
chr9	14811536	14812029	-	14811920	14812029	A3SS	0.25	50	50	ENSMUST00000034409.14	ENSMUSG00000031933.18	Izumo1r	chr9	protein_coding	IZUMO1 receptor, JUNO
chr9	14919315	14932678	-	14919315;14921552	14921332;14932678	ES	0.5	50	50	ENSMUST00000164273.9	ENSMUSG00000031934.15	Panx1	chr9	protein_coding	pannexin 1
chr9	14932817	14955048	-	14932817	14956153	A5SS	0.5	50	50	ENSMUST00000164273.9	ENSMUSG00000031934.15	Panx1	chr9	protein_coding	pannexin 1
chr9	14919315	14932678	-	14919315	14921332	5pMXE	0.5	50	50	ENSMUST00000166933.2	ENSMUSG00000031934.15	Panx1	chr9	protein_coding	pannexin 1
chr9	14919315	14932678	-	14921552	14932678	3pMXE	0.5	50	50	ENSMUST00000169288.2	ENSMUSG00000031934.15	Panx1	chr9	protein_coding	pannexin 1
chr9	15176765	15181639	-	15176765;15178847	15178710;15181639	ES	0.5	50	50	ENSMUST00000034411.10	ENSMUSG00000031935.10	Med17	chr9	protein_coding	mediator complex subunit 17
chr9	15181823	15182852	-	15181823	15182907	A5SS	0.5	50	50	ENSMUST00000034411.10	ENSMUSG00000031935.10	Med17	chr9	protein_coding	mediator complex subunit 17
chr9	15189019	15190846	-	15185881	15190846	A3SS	0.5	50	50	ENSMUST00000216406.2	ENSMUSG00000031935.10	Med17	chr9	protein_coding	mediator complex subunit 17
chr9	15185881	15187142	-	15185881	15190846	A5SS	0.5	50	50	ENSMUST00000216406.2	ENSMUSG00000031935.10	Med17	chr9	protein_coding	mediator complex subunit 17
chr9	15206055	15212663	-	15206055;15209237	15209139;15212663	ES	0.5	50	50	ENSMUST00000180339.8	ENSMUSG00000031938.16	4931406C07Rik	chr9	protein_coding	RIKEN cDNA 4931406C07 gene
chr9	15208140	15209139	-	15206055	15209139	A3SS	0.5	50	50	ENSMUST00000180339.8	ENSMUSG00000031938.16	4931406C07Rik	chr9	protein_coding	RIKEN cDNA 4931406C07 gene
chr9	15212809	15217333	-	15212809	15217510	A5SS	0.5	50	50	ENSMUST00000180339.8	ENSMUSG00000031938.16	4931406C07Rik	chr9	protein_coding	RIKEN cDNA 4931406C07 gene
chr9	15206055	15212663	-	15209237	15212663	3pMXE	0.5	50	50	ENSMUST00000213317.2	ENSMUSG00000031938.16	4931406C07Rik	chr9	protein_coding	RIKEN cDNA 4931406C07 gene
chr9	15222991	15224070	+	15222991	15223205	3pMXE	0.33	50	50	ENSMUST00000034415.6	ENSMUSG00000031939.17	Taf1d	chr9	protein_coding	TATA-box binding protein associated factor, RNA polymerase I, D
chr9	15217579;15218286	15218169;15219024	+	15217579	15219024	cassetteExon	0.5	100	100	ENSMUST00000034415.6	ENSMUSG00000031939.17	Taf1d	chr9	protein_coding	TATA-box binding protein associated factor, RNA polymerase I, D
chr9	15222991	15223114	+	15222991	15223205	A3SS	0.33	50	50	ENSMUST00000034415.6	ENSMUSG00000031939.17	Taf1d	chr9	protein_coding	TATA-box binding protein associated factor, RNA polymerase I, D
chr9	15217933	15219024	+	15217579	15219024	A5SS	0.33	50	50	ENSMUST00000034415.6	ENSMUSG00000031939.17	Taf1d	chr9	protein_coding	TATA-box binding protein associated factor, RNA polymerase I, D
chr9	15217579	15219024	+	15217579	15218169	A3SS	0.5	50	50	ENSMUST00000214054.2	ENSMUSG00000031939.17	Taf1d	chr9	protein_coding	TATA-box binding protein associated factor, RNA polymerase I, D
chr9	15222991	15223114	+	15222991	15224070	A3SS	0.33	50	50	ENSMUST00000214054.2	ENSMUSG00000031939.17	Taf1d	chr9	protein_coding	TATA-box binding protein associated factor, RNA polymerase I, D
chr9	15226772	15228185	+	15226736	15228185	A5SS	0.33	50	50	ENSMUST00000214054.2	ENSMUSG00000031939.17	Taf1d	chr9	protein_coding	TATA-box binding protein associated factor, RNA polymerase I, D
chr9	15227933	15228185	+	15226736	15228185	A5SS	0.33	50	50	ENSMUST00000214054.2	ENSMUSG00000031939.17	Taf1d	chr9	protein_coding	TATA-box binding protein associated factor, RNA polymerase I, D
chr9	15217933	15219024	+	15218286	15219024	A5SS&ES	0.33	50	50	ENSMUST00000215124.2	ENSMUSG00000031939.17	Taf1d	chr9	protein_coding	TATA-box binding protein associated factor, RNA polymerase I, D
chr9	15225328	15225509	+	15225328	15225527	A3SS	0.5	50	50	ENSMUST00000213763.2	ENSMUSG00000031939.17	Taf1d	chr9	protein_coding	TATA-box binding protein associated factor, RNA polymerase I, D
chr9	15227933	15228185	+	15226772	15228185	A5SS	0.33	50	50	ENSMUST00000216825.2	ENSMUSG00000031939.17	Taf1d	chr9	protein_coding	TATA-box binding protein associated factor, RNA polymerase I, D
chr9	15234379	15235445	-	15234379;15235006	15234865;15235445	ES	0.33	50	50	ENSMUST00000160946.8	ENSMUSG00000046111.18	Cep295	chr9	protein_coding	centrosomal protein 295
chr9	15235587	15237371	-	15235587;15237042	15236803;15237371	ES	0.5	50	50	ENSMUST00000160946.8	ENSMUSG00000046111.18	Cep295	chr9	protein_coding	centrosomal protein 295
chr9	15239247	15242050	-	15239247;15241944	15241801;15242050	ES	0.5	50	50	ENSMUST00000160946.8	ENSMUSG00000046111.18	Cep295	chr9	protein_coding	centrosomal protein 295
chr9	15228824	15228970	-	15228889	15228970	A3SS	0.5	50	50	ENSMUST00000160946.8	ENSMUSG00000046111.18	Cep295	chr9	protein_coding	centrosomal protein 295
chr9	15235009	15235445	-	15235006	15235445	A3SS	0.33	50	50	ENSMUST00000160946.8	ENSMUSG00000046111.18	Cep295	chr9	protein_coding	centrosomal protein 295
chr9	15242206	15244288	-	15242206	15243232	A5SS	0.5	50	50	ENSMUST00000160946.8	ENSMUSG00000046111.18	Cep295	chr9	protein_coding	centrosomal protein 295
chr9	15255227	15255420	-	15252920	15255420	A3SS	0.5	50	50	ENSMUST00000161132.9	ENSMUSG00000046111.18	Cep295	chr9	protein_coding	centrosomal protein 295
chr9	15234379	15235445	-	15234379;15235009	15234865;15235445	ES	0.33	50	50	ENSMUST00000217407.2	ENSMUSG00000046111.18	Cep295	chr9	protein_coding	centrosomal protein 295
chr9	15235587	15237371	-	15237042	15237371	3pMXE	0.5	50	50	ENSMUST00000162264.2	ENSMUSG00000046111.18	Cep295	chr9	protein_coding	centrosomal protein 295
chr9	15416937	15436924	+	15404925	15436924	A5SS	0.33	50	50	ENSMUST00000215907.2	ENSMUSG00000058173.13	Smco4	chr9	protein_coding	single-pass membrane protein with coiled-coil domains 4
chr9	15432175	15436924	+	15404925	15436924	A5SS	0.33	50	50	ENSMUST00000215907.2	ENSMUSG00000058173.13	Smco4	chr9	protein_coding	single-pass membrane protein with coiled-coil domains 4
chr9	15432175	15436924	+	15416937	15436924	A5SS	0.33	50	50	ENSMUST00000045620.10	ENSMUSG00000058173.13	Smco4	chr9	protein_coding	single-pass membrane protein with coiled-coil domains 4
chr9	15495625	15499282	-	15486640	15499282	A3SS	0.5	50	50	ENSMUST00000115592.8	ENSMUSG00000039977.17	Deup1	chr9	protein_coding	deuterosome assembly protein 1
chr9	15486640	15493821	-	15486640	15499282	A5SS	0.33	50	50	ENSMUST00000115592.8	ENSMUSG00000039977.17	Deup1	chr9	protein_coding	deuterosome assembly protein 1
chr9	15486640	15493828	-	15486640	15499282	A5SS	0.33	50	50	ENSMUST00000115592.8	ENSMUSG00000039977.17	Deup1	chr9	protein_coding	deuterosome assembly protein 1
chr9	15486640	15493828	-	15486640	15493821	A5SS	0.33	50	50	ENSMUST00000045513.13	ENSMUSG00000039977.17	Deup1	chr9	protein_coding	deuterosome assembly protein 1
chr9	15645602	15648245	+	15645602	15648168	A3SS	0.5	50	50	ENSMUST00000115588.8	ENSMUSG00000043885.15	Slc36a4	chr9	protein_coding	solute carrier family 36 (proton/amino acid symporter), member 4
chr9	15648337	15649370	+	15648324	15649370	A5SS	0.5	50	50	ENSMUST00000115588.8	ENSMUSG00000043885.15	Slc36a4	chr9	protein_coding	solute carrier family 36 (proton/amino acid symporter), member 4
chr9	15828291	15830460	-	15826917	15830460	A3SS	0.5	50	50	ENSMUST00000217308.3	ENSMUSG00000074505.7	Fat3	chr9	protein_coding	FAT atypical cadherin 3
chr9	15826917	15827500	-	15826917	15830460	A5SS	0.5	50	50	ENSMUST00000217308.3	ENSMUSG00000074505.7	Fat3	chr9	protein_coding	FAT atypical cadherin 3
chr9	15858864	15868959	-	15858864	15871040	A5SS	0.5	50	50	ENSMUST00000217308.3	ENSMUSG00000074505.7	Fat3	chr9	protein_coding	FAT atypical cadherin 3
chr9	18213479	18216589	+	18213479;18215682	18215579;18216589	ES	0.5	50	50	ENSMUST00000001825.9	ENSMUSG00000001774.9	Chordc1	chr9	protein_coding	cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1
chr9	18216647;18219580	18219518;18220046	+	18216647	18220046	cassetteExon	0.5	100	100	ENSMUST00000001825.9	ENSMUSG00000001774.9	Chordc1	chr9	protein_coding	cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1
chr9	18215682	18216592	+	18215682	18216589	A3SS	0.5	50	50	ENSMUST00000001825.9	ENSMUSG00000001774.9	Chordc1	chr9	protein_coding	cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1
chr9	18213479	18216589	+	18213479	18215579	A3SS&ES	0.5	50	50	ENSMUST00000217031.2	ENSMUSG00000001774.9	Chordc1	chr9	protein_coding	cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1
chr9	18216647	18220046	+	18216647	18219518	3pMXE	0.5	50	50	ENSMUST00000215421.2	ENSMUSG00000001774.9	Chordc1	chr9	protein_coding	cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1
chr9	18299490	18303395	-	18299490	18308524	A5SS	0.5	50	50	ENSMUST00000172171.8	ENSMUSG00000043943.15	Naalad2	chr9	protein_coding	N-acetylated alpha-linked acidic dipeptidase 2
chr9	18299490	18309328	-	18299490	18303395	5pMXE	0.25	50	50	ENSMUST00000001826.15	ENSMUSG00000043943.15	Naalad2	chr9	protein_coding	N-acetylated alpha-linked acidic dipeptidase 2
chr9	18299490	18313865	-	18299490	18303395	5pMXE	0.25	50	50	ENSMUST00000001826.15	ENSMUSG00000043943.15	Naalad2	chr9	protein_coding	N-acetylated alpha-linked acidic dipeptidase 2
chr9	18299490;18309419	18309328;18313865	-	18299490	18313865	cassetteExon	0.5	100	100	ENSMUST00000172116.8	ENSMUSG00000043943.15	Naalad2	chr9	protein_coding	N-acetylated alpha-linked acidic dipeptidase 2
chr9	18299490	18308524	-	18299490	18313865	A5SS	0.25	50	50	ENSMUST00000172116.8	ENSMUSG00000043943.15	Naalad2	chr9	protein_coding	N-acetylated alpha-linked acidic dipeptidase 2
chr9	18299490;18314090	18313865;18314165	-	18299490;18309419	18309328;18314165	MXE	0.5	100	100	ENSMUST00000101453.10	ENSMUSG00000043943.15	Naalad2	chr9	protein_coding	N-acetylated alpha-linked acidic dipeptidase 2
chr9	18309419;18314090	18313865;18314165	-	18309419	18314165	cassetteExon	0.5	100	100	ENSMUST00000101453.10	ENSMUSG00000043943.15	Naalad2	chr9	protein_coding	N-acetylated alpha-linked acidic dipeptidase 2
chr9	18299490	18308524	-	18299490	18309328	A5SS	0.25	50	50	ENSMUST00000101453.10	ENSMUSG00000043943.15	Naalad2	chr9	protein_coding	N-acetylated alpha-linked acidic dipeptidase 2
chr9	18371048	18379216	-	18371048;18372699	18372636;18379216	ES	0.5	50	50	ENSMUST00000159596.8	ENSMUSG00000074500.12	Zfp558	chr9	protein_coding	zinc finger protein 558
chr9	18380692	18384182	-	18380844	18384182	A3SS	0.5	50	50	ENSMUST00000159596.8	ENSMUSG00000074500.12	Zfp558	chr9	protein_coding	zinc finger protein 558
chr9	18384290	18388013	-	18385805	18388013	A3SS	0.5	50	50	ENSMUST00000159596.8	ENSMUSG00000074500.12	Zfp558	chr9	protein_coding	zinc finger protein 558
chr9	18388115	18389533	-	18388112	18389533	A3SS	0.5	50	50	ENSMUST00000159596.8	ENSMUSG00000074500.12	Zfp558	chr9	protein_coding	zinc finger protein 558
chr9	18384290	18388013	-	18384290	18384650	5pMXE	0.33	50	50	ENSMUST00000034647.11	ENSMUSG00000074500.12	Zfp558	chr9	protein_coding	zinc finger protein 558
chr9	18384290	18384446	-	18384290	18384650	A5SS	0.33	50	50	ENSMUST00000034647.11	ENSMUSG00000074500.12	Zfp558	chr9	protein_coding	zinc finger protein 558
chr9	18384290	18384446	-	18384290	18388013	A5SS	0.33	50	50	ENSMUST00000162441.3	ENSMUSG00000074500.12	Zfp558	chr9	protein_coding	zinc finger protein 558
chr9	18389729	18390467	+	18389688	18390467	A5SS	0.5	50	50	ENSMUST00000213625.2	ENSMUSG00000038691.6	Mbd3l1	chr9	protein_coding	methyl-CpG binding domain protein 3-like 1
chr9	18389729	18395859	+	18390525	18395859	A5SS&ES	0.5	50	50	ENSMUST00000213625.2	ENSMUSG00000038691.6	Mbd3l1	chr9	protein_coding	methyl-CpG binding domain protein 3-like 1
chr9	18389729	18395859	+	18389729;18390525	18390467;18395859	ES	0.5	50	50	ENSMUST00000069218.5	ENSMUSG00000038691.6	Mbd3l1	chr9	protein_coding	methyl-CpG binding domain protein 3-like 1
chr9	18521262;18529218	18528891;18530383	-	18521262	18530383	cassetteExon	0.5	100	100	ENSMUST00000207857.2	ENSMUSG00000109564.2	Muc16	chr9	protein_coding	mucin 16
chr9	18506546	18506650	-	18506546	18506635	A5SS	0.5	50	50	ENSMUST00000207857.2	ENSMUSG00000109564.2	Muc16	chr9	protein_coding	mucin 16
chr9	18516796	18519007	-	18508652	18519007	A3SS	0.5	50	50	ENSMUST00000208663.2	ENSMUSG00000109564.2	Muc16	chr9	protein_coding	mucin 16
chr9	18521262	18530383	-	18519042	18530383	A3SS	0.33	50	50	ENSMUST00000208663.2	ENSMUSG00000109564.2	Muc16	chr9	protein_coding	mucin 16
chr9	18529218	18530383	-	18519042	18530383	A3SS	0.33	50	50	ENSMUST00000208663.2	ENSMUSG00000109564.2	Muc16	chr9	protein_coding	mucin 16
chr9	18508652	18513780	-	18508652	18519007	A5SS	0.5	50	50	ENSMUST00000208663.2	ENSMUSG00000109564.2	Muc16	chr9	protein_coding	mucin 16
chr9	18519042	18519146	-	18519042	18530383	A5SS	0.5	50	50	ENSMUST00000208663.2	ENSMUSG00000109564.2	Muc16	chr9	protein_coding	mucin 16
chr9	18666939	18675103	-	18666127	18675103	A3SS	0.5	50	50	ENSMUST00000214366.2	ENSMUSG00000054141.6	Olfr24	chr9	protein_coding	olfactory receptor 24
chr9	19031925	19032224	+	19031711	19032224	A5SS	0.5	50	50	ENSMUST00000212730.3	ENSMUSG00000059303.7	Olfr836	chr9	protein_coding	olfactory receptor 836
chr9	19162507	19163130	-	19162507	19162692	A5SS	0.5	50	50	ENSMUST00000214019.2	ENSMUSG00000048391.4	Olfr843	chr9	protein_coding	olfactory receptor 843
chr9	19247928;19248297	19248172;19249745	+	19247928	19249745	cassetteExon	0.5	100	100	ENSMUST00000215572.3	ENSMUSG00000061614.6	Olfr845	chr9	protein_coding	olfactory receptor 845
chr9	19540502	19552362	+	19540502;19543684	19543630;19552362	ES	0.5	50	50	ENSMUST00000213725.2	ENSMUSG00000057551.11	Zfp317	chr9	protein_coding	zinc finger protein 317
chr9	19552550	19553260	+	19552550	19554905	A3SS	0.5	50	50	ENSMUST00000213725.2	ENSMUSG00000057551.11	Zfp317	chr9	protein_coding	zinc finger protein 317
chr9	19537291	19540393	+	19533581	19540393	A5SS	0.5	50	50	ENSMUST00000213725.2	ENSMUSG00000057551.11	Zfp317	chr9	protein_coding	zinc finger protein 317
chr9	19554020	19554905	+	19552550	19554905	A5SS	0.5	50	50	ENSMUST00000213725.2	ENSMUSG00000057551.11	Zfp317	chr9	protein_coding	zinc finger protein 317
chr9	19534528	19535528	+	19533704	19535528	A5SS	0.5	50	50	ENSMUST00000215372.2	ENSMUSG00000057551.11	Zfp317	chr9	protein_coding	zinc finger protein 317
chr9	19620919	19624112	+	19620919	19624147	A3SS	0.5	50	50	ENSMUST00000217450.4	ENSMUSG00000094678.6	Olfr857	chr9	protein_coding	olfactory receptor 857
chr9	19691820	19694418	+	19691820	19694453	A3SS	0.5	50	50	ENSMUST00000212363.2	ENSMUSG00000058659.7	Olfr58	chr9	protein_coding	olfactory receptor 58
chr9	19716481	19719605	+	19716415	19719605	A5SS	0.5	50	50	ENSMUST00000212540.3	ENSMUSG00000095448.4	Olfr859	chr9	protein_coding	olfactory receptor 859
chr9	19757926;19759344	19759211;19760833	-	19757926	19760833	cassetteExon	0.5	100	100	ENSMUST00000086482.4	ENSMUSG00000066905.5	Olfr860	chr9	protein_coding	olfactory receptor 860
chr9	19828731;19830120	19829973;19831491	+	19828731	19831491	cassetteExon	0.5	100	100	ENSMUST00000217347.2	ENSMUSG00000051118.10	Olfr77	chr9	protein_coding	olfactory receptor 77
chr9	19966384	19968765	-	19966773	19968765	A3SS	0.5	50	50	ENSMUST00000216538.2	ENSMUSG00000044454.6	Olfr867	chr9	protein_coding	olfactory receptor 867
chr9	20010119;20010988	20010952;20012053	+	20010119	20012053	cassetteExon	0.5	100	100	ENSMUST00000212767.4	ENSMUSG00000044106.6	Olfr868	chr9	protein_coding	olfactory receptor 868
chr9	20209938	20211524	+	20209938	20211769	A3SS	0.5	50	50	ENSMUST00000213445.2	ENSMUSG00000049028.9	Olfr873	chr9	protein_coding	olfactory receptor 873
chr9	20209938	20211524	+	20210383	20211524	A5SS	0.33	50	50	ENSMUST00000215540.2	ENSMUSG00000049028.9	Olfr873	chr9	protein_coding	olfactory receptor 873
chr9	20210007	20211524	+	20210383	20211524	A5SS	0.33	50	50	ENSMUST00000215540.2	ENSMUSG00000049028.9	Olfr873	chr9	protein_coding	olfactory receptor 873
chr9	20210007	20211524	+	20209938	20211524	A5SS	0.33	50	50	ENSMUST00000075717.7	ENSMUSG00000049028.9	Olfr873	chr9	protein_coding	olfactory receptor 873
chr9	20226161;20246396	20246386;20247209	-	20226161	20247209	cassetteExon	0.5	100	100	ENSMUST00000212943.4	ENSMUSG00000066896.7	Olfr18	chr9	protein_coding	olfactory receptor 18
chr9	20265545	20266770	-	20265545	20296313	A5SS	0.5	50	50	ENSMUST00000068079.14	ENSMUSG00000045519.16	Zfp560	chr9	protein_coding	zinc finger protein 560
chr9	20352751	20355555	-	20352751;20353561	20353476;20355555	ES	0.5	50	50	ENSMUST00000159569.9	ENSMUSG00000063108.16	Zfp26	chr9	protein_coding	zinc finger protein 26
chr9	20349733	20350818	-	20349956	20350818	A3SS	0.5	50	50	ENSMUST00000159569.9	ENSMUSG00000063108.16	Zfp26	chr9	protein_coding	zinc finger protein 26
chr9	20370957	20371202	-	20370957	20371241	A5SS	0.33	50	50	ENSMUST00000159569.9	ENSMUSG00000063108.16	Zfp26	chr9	protein_coding	zinc finger protein 26
chr9	20370957	20371316	-	20370957	20371241	A5SS	0.33	50	50	ENSMUST00000159569.9	ENSMUSG00000063108.16	Zfp26	chr9	protein_coding	zinc finger protein 26
chr9	20370957	20371316	-	20370957	20371202	5pMXE	0.33	50	50	ENSMUST00000098970.10	ENSMUSG00000063108.16	Zfp26	chr9	protein_coding	zinc finger protein 26
chr9	20384404	20387692	-	20384404;20386329	20386207;20387692	ES	0.33	50	50	ENSMUST00000168095.8	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20382541	20382995	-	20382544	20382995	A3SS	0.5	50	50	ENSMUST00000168095.8	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20386371	20387692	-	20386329	20387692	A3SS	0.33	50	50	ENSMUST00000168095.8	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20384404	20386203	-	20384404	20386207	A5SS	0.33	50	50	ENSMUST00000168095.8	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20384404	20387692	-	20384404;20386329	20386203;20387692	ES	0.33	50	50	ENSMUST00000115562.9	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20386329;20397721	20397626;20403682	-	20386329;20389550	20387692;20403682	MXE	0.5	100	100	ENSMUST00000115562.9	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20389550;20397721	20397626;20403682	-	20389550	20403682	cassetteExon	0.5	100	100	ENSMUST00000115562.9	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20386329;20397733	20397626;20403682	-	20386329;20389550	20387692;20403682	MXE	0.5	100	100	ENSMUST00000115562.9	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20389550;20397733	20397626;20403682	-	20389550	20403682	cassetteExon	0.5	100	100	ENSMUST00000115562.9	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20402778	20403682	-	20389550	20403682	A3SS	0.25	50	50	ENSMUST00000115562.9	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20397733	20403682	-	20397733;20402778	20401977;20403682	ES	0.25	50	50	ENSMUST00000167457.8	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20389454	20397626	-	20386329	20397626	A3SS	0.25	50	50	ENSMUST00000167457.8	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20389550	20397626	-	20386329	20397626	A3SS	0.25	50	50	ENSMUST00000167457.8	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20389575	20397626	-	20386329	20397626	A3SS	0.25	50	50	ENSMUST00000167457.8	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20397721	20403682	-	20402778	20403682	A3SS&ES	0.25	50	50	ENSMUST00000167457.8	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20384404	20387692	-	20384404	20386203	A5SS&ES	0.33	50	50	ENSMUST00000167457.8	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20386329	20387692	-	20386329	20397626	A5SS	0.5	50	50	ENSMUST00000167457.8	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20389550	20397626	-	20389454	20397626	A3SS	0.25	50	50	ENSMUST00000169558.8	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20389550	20403682	-	20397733	20403682	A3SS&ES	0.25	50	50	ENSMUST00000169558.8	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20389575	20397626	-	20389454	20397626	A3SS	0.25	50	50	ENSMUST00000169558.8	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20397721	20403682	-	20397733	20403682	A3SS	0.25	50	50	ENSMUST00000169558.8	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20402778	20403682	-	20397733	20403682	A3SS	0.25	50	50	ENSMUST00000169558.8	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20397733	20401977	-	20397733	20403682	A5SS	0.5	50	50	ENSMUST00000169558.8	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20389575	20397626	-	20389550	20397626	A3SS	0.25	50	50	ENSMUST00000080386.13	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20384404;20386329	20386203;20397626	-	20384404;20389575	20387692;20397626	MXE	0.5	100	100	ENSMUST00000163427.8	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20384404;20386329	20386207;20397626	-	20384404;20389575	20387692;20397626	MXE	0.5	100	100	ENSMUST00000163427.8	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20384404;20386371	20386203;20387692	-	20384404	20387692	cassetteExon	0.5	100	100	ENSMUST00000163427.8	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20384404;20386371	20386207;20387692	-	20384404	20387692	cassetteExon	0.5	100	100	ENSMUST00000163427.8	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20384404	20387692	-	20386329	20387692	3pMXE	0.33	50	50	ENSMUST00000169269.8	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20389550	20403682	-	20397721	20403682	A3SS&ES	0.25	50	50	ENSMUST00000164250.2	ENSMUSG00000059475.14	Zfp426	chr9	protein_coding	zinc finger protein 426
chr9	20417361	20419315	-	20417361;20418178	20418024;20419315	ES	0.33	50	50	ENSMUST00000174462.8	ENSMUSG00000060510.15	Zfp266	chr9	protein_coding	zinc finger protein 266
chr9	20419481	20432640	-	20419481;20432415	20432316;20432640	ES	0.5	50	50	ENSMUST00000174462.8	ENSMUSG00000060510.15	Zfp266	chr9	protein_coding	zinc finger protein 266
chr9	20418178;20419019	20418929;20419315	-	20418178	20419315	cassetteExon	0.5	100	100	ENSMUST00000174462.8	ENSMUSG00000060510.15	Zfp266	chr9	protein_coding	zinc finger protein 266
chr9	20419481	20432651	-	20419481	20432316	A5SS&ES	0.33	50	50	ENSMUST00000174462.8	ENSMUSG00000060510.15	Zfp266	chr9	protein_coding	zinc finger protein 266
chr9	20432415	20432651	-	20432415	20432640	A5SS	0.5	50	50	ENSMUST00000174462.8	ENSMUSG00000060510.15	Zfp266	chr9	protein_coding	zinc finger protein 266
chr9	20419481	20432651	-	20419481;20432415	20432316;20432651	ES	0.5	50	50	ENSMUST00000068296.8	ENSMUSG00000060510.15	Zfp266	chr9	protein_coding	zinc finger protein 266
chr9	20419481	20432640	-	20419481	20432316	A5SS&ES	0.33	50	50	ENSMUST00000068296.8	ENSMUSG00000060510.15	Zfp266	chr9	protein_coding	zinc finger protein 266
chr9	20419019	20419315	-	20417361	20419315	A3SS	0.33	50	50	ENSMUST00000215908.2	ENSMUSG00000060510.15	Zfp266	chr9	protein_coding	zinc finger protein 266
chr9	20419481	20432640	-	20419481	20432651	A5SS	0.33	50	50	ENSMUST00000213418.2	ENSMUSG00000060510.15	Zfp266	chr9	protein_coding	zinc finger protein 266
chr9	20417361	20419315	-	20418178	20419315	3pMXE	0.33	50	50	ENSMUST00000217488.2	ENSMUSG00000060510.15	Zfp266	chr9	protein_coding	zinc finger protein 266
chr9	20419481	20432640	-	20432415	20432640	3pMXE	0.5	50	50	ENSMUST00000213275.2	ENSMUSG00000060510.15	Zfp266	chr9	protein_coding	zinc finger protein 266
chr9	20499931;20500854	20500753;20502109	+	20499931	20502109	cassetteExon	0.5	100	100	ENSMUST00000115557.10	ENSMUSG00000058192.17	Zfp846	chr9	protein_coding	zinc finger protein 846
chr9	20519136	20525890	+	20518926	20525890	A5SS	0.33	50	50	ENSMUST00000136376.2	ENSMUSG00000062470.11	Fbxl12os	chr9	lncRNA	F-box and leucine-rich repeat protein 12, opposite strand
chr9	20520689	20525890	+	20518926	20525890	A5SS	0.33	50	50	ENSMUST00000136376.2	ENSMUSG00000062470.11	Fbxl12os	chr9	lncRNA	F-box and leucine-rich repeat protein 12, opposite strand
chr9	20519136	20525890	+	20520689	20525890	A5SS	0.33	50	50	ENSMUST00000138471.2	ENSMUSG00000062470.11	Fbxl12os	chr9	lncRNA	F-box and leucine-rich repeat protein 12, opposite strand
chr9	20553392	20555491	-	20553392	20553500	5pMXE	0.33	50	50	ENSMUST00000155301.8	ENSMUSG00000066892.15	Fbxl12	chr9	protein_coding	F-box and leucine-rich repeat protein 12
chr9	20553392	20555869	-	20553392	20553500	5pMXE	0.33	50	50	ENSMUST00000155301.8	ENSMUSG00000066892.15	Fbxl12	chr9	protein_coding	F-box and leucine-rich repeat protein 12
chr9	20550494	20553320	-	20529706	20553320	A3SS	0.5	50	50	ENSMUST00000155301.8	ENSMUSG00000066892.15	Fbxl12	chr9	protein_coding	F-box and leucine-rich repeat protein 12
chr9	20529706;20553392	20553320;20555869	-	20529706	20555869	cassetteExon	0.5	100	100	ENSMUST00000155280.8	ENSMUSG00000066892.15	Fbxl12	chr9	protein_coding	F-box and leucine-rich repeat protein 12
chr9	20555594	20555869	-	20529706	20555869	A3SS	0.33	50	50	ENSMUST00000155280.8	ENSMUSG00000066892.15	Fbxl12	chr9	protein_coding	F-box and leucine-rich repeat protein 12
chr9	20553392	20555869	-	20553392;20555594	20553500;20555869	ES	0.5	50	50	ENSMUST00000148631.8	ENSMUSG00000066892.15	Fbxl12	chr9	protein_coding	F-box and leucine-rich repeat protein 12
chr9	20553392;20555594	20555491;20555869	-	20553392	20555869	cassetteExon	0.5	100	100	ENSMUST00000151861.9	ENSMUSG00000066892.15	Fbxl12	chr9	protein_coding	F-box and leucine-rich repeat protein 12
chr9	20553392	20555869	-	20553392	20555491	A5SS	0.33	50	50	ENSMUST00000086458.10	ENSMUSG00000066892.15	Fbxl12	chr9	protein_coding	F-box and leucine-rich repeat protein 12
chr9	20556785	20556898	+	20556785	20556918	A3SS	0.5	50	50	ENSMUST00000154429.9	ENSMUSG00000084786.10	Ubl5	chr9	protein_coding	ubiquitin-like 5
chr9	20556272	20556489	+	20556189	20556489	A5SS	0.5	50	50	ENSMUST00000154429.9	ENSMUSG00000084786.10	Ubl5	chr9	protein_coding	ubiquitin-like 5
chr9	20556789	20556918	+	20556785	20556918	A5SS	0.5	50	50	ENSMUST00000154429.9	ENSMUSG00000084786.10	Ubl5	chr9	protein_coding	ubiquitin-like 5
chr9	20555684	20556120	+	20555434	20556120	A5SS	0.5	50	50	ENSMUST00000160682.8	ENSMUSG00000084786.10	Ubl5	chr9	protein_coding	ubiquitin-like 5
chr9	20587019	20657467	-	20587019	20639409	5pMXE	0.33	50	50	ENSMUST00000034692.9	ENSMUSG00000032172.9	Olfm2	chr9	protein_coding	olfactomedin 2
chr9	20587019	20637942	-	20587019	20639409	A5SS	0.33	50	50	ENSMUST00000034692.9	ENSMUSG00000032172.9	Olfm2	chr9	protein_coding	olfactomedin 2
chr9	20587019	20637942	-	20587019	20657467	A5SS	0.33	50	50	ENSMUST00000215999.2	ENSMUSG00000032172.9	Olfm2	chr9	protein_coding	olfactomedin 2
chr9	20780949	20781058	+	20780949	20782493	A3SS	0.5	50	50	ENSMUST00000043911.8	ENSMUSG00000038884.15	Shfl	chr9	protein_coding	shiftless antiviral inhibitor of ribosomal frameshifting
chr9	20801237	20802201	+	20801237;20802011	20801935;20802201	ES	0.5	50	50	ENSMUST00000004203.6	ENSMUSG00000004100.13	Ppan	chr9	protein_coding	peter pan homolog
chr9	20801237	20802201	+	20802011	20802201	5pMXE	0.5	50	50	ENSMUST00000153227.2	ENSMUSG00000004100.13	Ppan	chr9	protein_coding	peter pan homolog
chr9	20853915	20864004	-	20853915	20863142	5pMXE	0.33	50	50	ENSMUST00000178110.3	ENSMUSG00000004099.17	Dnmt1	chr9	protein_coding	DNA methyltransferase (cytosine-5) 1
chr9	20853915	20871029	-	20853915	20863142	5pMXE	0.33	50	50	ENSMUST00000178110.3	ENSMUSG00000004099.17	Dnmt1	chr9	protein_coding	DNA methyltransferase (cytosine-5) 1
chr9	20851850	20852669	-	20851847	20852669	A3SS	0.5	50	50	ENSMUST00000178110.3	ENSMUSG00000004099.17	Dnmt1	chr9	protein_coding	DNA methyltransferase (cytosine-5) 1
chr9	20853915	20871029	-	20853915	20864004	5pMXE	0.33	50	50	ENSMUST00000004202.17	ENSMUSG00000004099.17	Dnmt1	chr9	protein_coding	DNA methyltransferase (cytosine-5) 1
chr9	20851847	20864004	-	20853915	20864004	A3SS&ES	0.5	50	50	ENSMUST00000004202.17	ENSMUSG00000004099.17	Dnmt1	chr9	protein_coding	DNA methyltransferase (cytosine-5) 1
chr9	20851847	20864004	-	20851847	20852669	A5SS&ES	0.5	50	50	ENSMUST00000177754.9	ENSMUSG00000004099.17	Dnmt1	chr9	protein_coding	DNA methyltransferase (cytosine-5) 1
chr9	20879866;20886947	20886769;20887894	-	20879866	20887894	cassetteExon	0.5	100	100	ENSMUST00000054197.7	ENSMUSG00000043895.7	S1pr2	chr9	protein_coding	sphingosine-1-phosphate receptor 2
chr9	20879866	20885178	-	20879866	20887894	A5SS	0.33	50	50	ENSMUST00000054197.7	ENSMUSG00000043895.7	S1pr2	chr9	protein_coding	sphingosine-1-phosphate receptor 2
chr9	20879866	20886769	-	20879866	20885178	5pMXE	0.33	50	50	ENSMUST00000216499.2	ENSMUSG00000043895.7	S1pr2	chr9	protein_coding	sphingosine-1-phosphate receptor 2
chr9	20914700;20917182	20917159;20917430	+	20914700	20917430	cassetteExon	0.5	100	100	ENSMUST00000003386.7	ENSMUSG00000003299.11	Mrpl4	chr9	protein_coding	mitochondrial ribosomal protein L4
chr9	20918240	20918560	+	20918240	20918730	A3SS	0.25	50	50	ENSMUST00000003386.7	ENSMUSG00000003299.11	Mrpl4	chr9	protein_coding	mitochondrial ribosomal protein L4
chr9	20918240	20918624	+	20918240	20918730	A3SS	0.25	50	50	ENSMUST00000003386.7	ENSMUSG00000003299.11	Mrpl4	chr9	protein_coding	mitochondrial ribosomal protein L4
chr9	20918240	20918660	+	20918240	20918730	A3SS	0.25	50	50	ENSMUST00000003386.7	ENSMUSG00000003299.11	Mrpl4	chr9	protein_coding	mitochondrial ribosomal protein L4
chr9	20917531	20918123	+	20917481	20918123	A5SS	0.5	50	50	ENSMUST00000003386.7	ENSMUSG00000003299.11	Mrpl4	chr9	protein_coding	mitochondrial ribosomal protein L4
chr9	20918240	20918560	+	20918240	20918660	A3SS	0.25	50	50	ENSMUST00000216824.2	ENSMUSG00000003299.11	Mrpl4	chr9	protein_coding	mitochondrial ribosomal protein L4
chr9	20918240	20918624	+	20918240	20918660	A3SS	0.25	50	50	ENSMUST00000216824.2	ENSMUSG00000003299.11	Mrpl4	chr9	protein_coding	mitochondrial ribosomal protein L4
chr9	20918240	20918560	+	20918240	20918624	A3SS	0.25	50	50	ENSMUST00000216175.2	ENSMUSG00000003299.11	Mrpl4	chr9	protein_coding	mitochondrial ribosomal protein L4
chr9	20918152	20918624	+	20918240	20918624	A5SS	0.5	50	50	ENSMUST00000216175.2	ENSMUSG00000003299.11	Mrpl4	chr9	protein_coding	mitochondrial ribosomal protein L4
chr9	20991464	20992001	-	20991467	20992001	A3SS	0.5	50	50	ENSMUST00000217359.2	ENSMUSG00000111497.2	Gm38431	chr9	protein_coding	predicted gene, 38431
chr9	20984614	20984685	-	20984614	20986587	A5SS	0.5	50	50	ENSMUST00000217359.2	ENSMUSG00000111497.2	Gm38431	chr9	protein_coding	predicted gene, 38431
chr9	21025616;21026575	21026488;21026668	-	21025616	21026668	cassetteExon	0.5	100	100	ENSMUST00000213717.2	ENSMUSG00000032175.12	Tyk2	chr9	protein_coding	tyrosine kinase 2
chr9	21027537;21031999	21031556;21032688	-	21027537	21032688	cassetteExon	0.5	100	100	ENSMUST00000213717.2	ENSMUSG00000032175.12	Tyk2	chr9	protein_coding	tyrosine kinase 2
chr9	21035505	21035707	-	21035436	21035707	A3SS	0.5	50	50	ENSMUST00000213717.2	ENSMUSG00000032175.12	Tyk2	chr9	protein_coding	tyrosine kinase 2
chr9	21053973	21054243	-	21053826	21054243	A3SS	0.5	50	50	ENSMUST00000019615.11	ENSMUSG00000019471.11	Cdc37	chr9	protein_coding	cell division cycle 37
chr9	21093116	21102623	+	21077528	21102623	A5SS	0.33	50	50	ENSMUST00000039413.15	ENSMUSG00000032177.18	Pde4a	chr9	protein_coding	phosphodiesterase 4A, cAMP specific
chr9	21095847	21102623	+	21077528	21102623	A5SS	0.33	50	50	ENSMUST00000039413.15	ENSMUSG00000032177.18	Pde4a	chr9	protein_coding	phosphodiesterase 4A, cAMP specific
chr9	21108474	21109889	+	21106154	21109889	A5SS	0.5	50	50	ENSMUST00000039413.15	ENSMUSG00000032177.18	Pde4a	chr9	protein_coding	phosphodiesterase 4A, cAMP specific
chr9	21095847	21102623	+	21093116	21102623	A5SS	0.33	50	50	ENSMUST00000131769.8	ENSMUSG00000032177.18	Pde4a	chr9	protein_coding	phosphodiesterase 4A, cAMP specific
chr9	21145357	21148367	-	21145369	21148367	A3SS	0.33	50	50	ENSMUST00000194542.6	ENSMUSG00000003308.16	Keap1	chr9	protein_coding	kelch-like ECH-associated protein 1
chr9	21147612	21148367	-	21145369	21148367	A3SS	0.33	50	50	ENSMUST00000194542.6	ENSMUSG00000003308.16	Keap1	chr9	protein_coding	kelch-like ECH-associated protein 1
chr9	21149052	21150089	-	21149052	21150372	A5SS	0.33	50	50	ENSMUST00000194542.6	ENSMUSG00000003308.16	Keap1	chr9	protein_coding	kelch-like ECH-associated protein 1
chr9	21149052	21150204	-	21149052	21150372	A5SS	0.33	50	50	ENSMUST00000194542.6	ENSMUSG00000003308.16	Keap1	chr9	protein_coding	kelch-like ECH-associated protein 1
chr9	21149052	21150204	-	21149052	21150089	A5SS	0.33	50	50	ENSMUST00000049567.10	ENSMUSG00000003308.16	Keap1	chr9	protein_coding	kelch-like ECH-associated protein 1
chr9	21147612	21148367	-	21145357	21148367	A3SS	0.33	50	50	ENSMUST00000216436.2	ENSMUSG00000003308.16	Keap1	chr9	protein_coding	kelch-like ECH-associated protein 1
chr9	21179965;21180723	21180599;21182016	+	21179965	21182016	cassetteExon	0.5	100	100	ENSMUST00000065005.5	ENSMUSG00000002820.7	Atg4d	chr9	protein_coding	autophagy related 4D, cysteine peptidase
chr9	21177013	21177889	+	21177013	21178035	A3SS	0.5	50	50	ENSMUST00000065005.5	ENSMUSG00000002820.7	Atg4d	chr9	protein_coding	autophagy related 4D, cysteine peptidase
chr9	21200628;21201772	21201721;21202105	-	21200628	21202105	cassetteExon	0.5	100	100	ENSMUST00000215619.2	ENSMUSG00000096472.3	Cdkn2d	chr9	protein_coding	cyclin dependent kinase inhibitor 2D
chr9	21214067;21216704	21216578;21216789	-	21214067	21216789	cassetteExon	0.5	100	100	ENSMUST00000213762.2	ENSMUSG00000003309.15	Ap1m2	chr9	protein_coding	adaptor protein complex AP-1, mu 2 subunit
chr9	21216962	21220663	-	21217067	21220663	A3SS	0.5	50	50	ENSMUST00000213762.2	ENSMUSG00000003309.15	Ap1m2	chr9	protein_coding	adaptor protein complex AP-1, mu 2 subunit
chr9	21214061	21216578	-	21214067	21216578	A3SS	0.5	50	50	ENSMUST00000115433.11	ENSMUSG00000003309.15	Ap1m2	chr9	protein_coding	adaptor protein complex AP-1, mu 2 subunit
chr9	21214067	21216789	-	21216704	21216789	A3SS&ES	0.5	50	50	ENSMUST00000003397.9	ENSMUSG00000003309.15	Ap1m2	chr9	protein_coding	adaptor protein complex AP-1, mu 2 subunit
chr9	21263847;21264424	21264297;21264978	+	21263847	21264978	cassetteExon	0.5	100	100	ENSMUST00000217461.2	ENSMUSG00000057193.9	Slc44a2	chr9	protein_coding	solute carrier family 44, member 2
chr9	21263847;21264468	21264297;21264978	+	21263847	21264978	cassetteExon	0.5	100	100	ENSMUST00000217461.2	ENSMUSG00000057193.9	Slc44a2	chr9	protein_coding	solute carrier family 44, member 2
chr9	21258425	21259187	+	21258425	21259179	A3SS	0.5	50	50	ENSMUST00000217461.2	ENSMUSG00000057193.9	Slc44a2	chr9	protein_coding	solute carrier family 44, member 2
chr9	21249258	21249737	+	21232147	21249737	A5SS	0.5	50	50	ENSMUST00000217461.2	ENSMUSG00000057193.9	Slc44a2	chr9	protein_coding	solute carrier family 44, member 2
chr9	21264468	21264978	+	21264424	21264978	A5SS	0.33	50	50	ENSMUST00000214268.2	ENSMUSG00000057193.9	Slc44a2	chr9	protein_coding	solute carrier family 44, member 2
chr9	21303738	21305491	+	21303738;21305098	21305007;21305491	ES	0.5	50	50	ENSMUST00000067646.12	ENSMUSG00000032178.15	Ilf3	chr9	protein_coding	interleukin enhancer binding factor 3
chr9	21299093;21299446	21299408;21299820	+	21299093	21299820	cassetteExon	0.5	100	100	ENSMUST00000067646.12	ENSMUSG00000032178.15	Ilf3	chr9	protein_coding	interleukin enhancer binding factor 3
chr9	21311309;21311808	21311748;21314432	+	21311309	21314432	cassetteExon	0.5	100	100	ENSMUST00000067646.12	ENSMUSG00000032178.15	Ilf3	chr9	protein_coding	interleukin enhancer binding factor 3
chr9	21299093	21299805	+	21299093	21299820	A3SS	0.33	50	50	ENSMUST00000067646.12	ENSMUSG00000032178.15	Ilf3	chr9	protein_coding	interleukin enhancer binding factor 3
chr9	21309432	21310409	+	21309432	21310421	A3SS	0.5	50	50	ENSMUST00000067646.12	ENSMUSG00000032178.15	Ilf3	chr9	protein_coding	interleukin enhancer binding factor 3
chr9	21279898	21298996	+	21279395	21298996	A5SS	0.25	50	50	ENSMUST00000067646.12	ENSMUSG00000032178.15	Ilf3	chr9	protein_coding	interleukin enhancer binding factor 3
chr9	21284878	21298996	+	21279395	21298996	A5SS	0.25	50	50	ENSMUST00000067646.12	ENSMUSG00000032178.15	Ilf3	chr9	protein_coding	interleukin enhancer binding factor 3
chr9	21288509	21298996	+	21279395	21298996	A5SS	0.25	50	50	ENSMUST00000067646.12	ENSMUSG00000032178.15	Ilf3	chr9	protein_coding	interleukin enhancer binding factor 3
chr9	21315478	21315992	+	21315487	21315992	A5SS	0.5	50	50	ENSMUST00000067646.12	ENSMUSG00000032178.15	Ilf3	chr9	protein_coding	interleukin enhancer binding factor 3
chr9	21299093	21299805	+	21299093	21299408	A3SS&ES	0.33	50	50	ENSMUST00000213518.2	ENSMUSG00000032178.15	Ilf3	chr9	protein_coding	interleukin enhancer binding factor 3
chr9	21311309	21314432	+	21311309	21311748	3pMXE	0.5	50	50	ENSMUST00000214217.2	ENSMUSG00000032178.15	Ilf3	chr9	protein_coding	interleukin enhancer binding factor 3
chr9	21284878	21298996	+	21279898	21298996	A5SS	0.25	50	50	ENSMUST00000214474.2	ENSMUSG00000032178.15	Ilf3	chr9	protein_coding	interleukin enhancer binding factor 3
chr9	21288509	21298996	+	21279898	21298996	A5SS	0.25	50	50	ENSMUST00000214474.2	ENSMUSG00000032178.15	Ilf3	chr9	protein_coding	interleukin enhancer binding factor 3
chr9	21288509	21298996	+	21284878	21298996	A5SS	0.25	50	50	ENSMUST00000213603.2	ENSMUSG00000032178.15	Ilf3	chr9	protein_coding	interleukin enhancer binding factor 3
chr9	21303738	21305491	+	21305098	21305491	A5SS&ES	0.5	50	50	ENSMUST00000214821.2	ENSMUSG00000032178.15	Ilf3	chr9	protein_coding	interleukin enhancer binding factor 3
chr9	21323827;21326315	21326211;21328361	+	21323827	21328361	cassetteExon	0.5	100	100	ENSMUST00000002902.8	ENSMUSG00000002825.9	Qtrt1	chr9	protein_coding	queuine tRNA-ribosyltransferase catalytic subunit 1
chr9	21323597	21323667	+	21323597	21323689	A3SS	0.5	50	50	ENSMUST00000002902.8	ENSMUSG00000002825.9	Qtrt1	chr9	protein_coding	queuine tRNA-ribosyltransferase catalytic subunit 1
chr9	21329718	21330550	+	21329718	21330587	A3SS	0.5	50	50	ENSMUST00000002902.8	ENSMUSG00000002825.9	Qtrt1	chr9	protein_coding	queuine tRNA-ribosyltransferase catalytic subunit 1
chr9	21331008	21331338	+	21331008	21331332	A3SS	0.5	50	50	ENSMUST00000002902.8	ENSMUSG00000002825.9	Qtrt1	chr9	protein_coding	queuine tRNA-ribosyltransferase catalytic subunit 1
chr9	21323241	21323529	+	21323393	21323529	A5SS	0.5	50	50	ENSMUST00000002902.8	ENSMUSG00000002825.9	Qtrt1	chr9	protein_coding	queuine tRNA-ribosyltransferase catalytic subunit 1
chr9	21328693	21329580	+	21328683	21329580	A5SS	0.33	50	50	ENSMUST00000002902.8	ENSMUSG00000002825.9	Qtrt1	chr9	protein_coding	queuine tRNA-ribosyltransferase catalytic subunit 1
chr9	21329416	21329580	+	21328683	21329580	A5SS	0.33	50	50	ENSMUST00000002902.8	ENSMUSG00000002825.9	Qtrt1	chr9	protein_coding	queuine tRNA-ribosyltransferase catalytic subunit 1
chr9	21329416	21329580	+	21328693	21329580	A5SS	0.33	50	50	ENSMUST00000214681.2	ENSMUSG00000002825.9	Qtrt1	chr9	protein_coding	queuine tRNA-ribosyltransferase catalytic subunit 1
chr9	21336552	21376878	+	21336552;21368872	21368799;21376878	ES	0.5	50	50	ENSMUST00000165766.9	ENSMUSG00000033335.18	Dnm2	chr9	protein_coding	dynamin 2
chr9	21401090	21405800	+	21401090;21401965	21401954;21405800	ES	0.33	50	50	ENSMUST00000165766.9	ENSMUSG00000033335.18	Dnm2	chr9	protein_coding	dynamin 2
chr9	21389644;21391841	21391703;21392629	+	21389644;21390333	21390195;21392629	MXE	0.5	100	100	ENSMUST00000165766.9	ENSMUSG00000033335.18	Dnm2	chr9	protein_coding	dynamin 2
chr9	21397017;21398372	21398343;21401039	+	21397017	21401039	cassetteExon	0.5	100	100	ENSMUST00000165766.9	ENSMUSG00000033335.18	Dnm2	chr9	protein_coding	dynamin 2
chr9	21401090;21401217	21401206;21405800	+	21401090;21401965	21401954;21405800	MXE	0.5	100	100	ENSMUST00000165766.9	ENSMUSG00000033335.18	Dnm2	chr9	protein_coding	dynamin 2
chr9	21401965	21402542	+	21401965	21405800	A3SS	0.5	50	50	ENSMUST00000165766.9	ENSMUSG00000033335.18	Dnm2	chr9	protein_coding	dynamin 2
chr9	21417011	21417629	+	21417011	21418719	A3SS	0.33	50	50	ENSMUST00000165766.9	ENSMUSG00000033335.18	Dnm2	chr9	protein_coding	dynamin 2
chr9	21417011	21417632	+	21417011	21418719	A3SS	0.33	50	50	ENSMUST00000165766.9	ENSMUSG00000033335.18	Dnm2	chr9	protein_coding	dynamin 2
chr9	21368707	21368799	+	21336552	21368799	A5SS	0.5	50	50	ENSMUST00000165766.9	ENSMUSG00000033335.18	Dnm2	chr9	protein_coding	dynamin 2
chr9	21416540	21416760	+	21415958	21416760	A5SS	0.5	50	50	ENSMUST00000165766.9	ENSMUSG00000033335.18	Dnm2	chr9	protein_coding	dynamin 2
chr9	21417011	21417629	+	21417011	21417632	A3SS	0.33	50	50	ENSMUST00000173397.8	ENSMUSG00000033335.18	Dnm2	chr9	protein_coding	dynamin 2
chr9	21401090;21401217	21401206;21405800	+	21401090	21405800	cassetteExon	0.5	100	100	ENSMUST00000091087.13	ENSMUSG00000033335.18	Dnm2	chr9	protein_coding	dynamin 2
chr9	21401090	21401206	+	21401090	21401954	A3SS	0.5	50	50	ENSMUST00000169194.9	ENSMUSG00000033335.18	Dnm2	chr9	protein_coding	dynamin 2
chr9	21390333	21392629	+	21391841	21392629	5pMXE	0.5	50	50	ENSMUST00000172763.8	ENSMUSG00000033335.18	Dnm2	chr9	protein_coding	dynamin 2
chr9	21419687	21421290	-	21419687;21420647	21420227;21421290	ES	0.33	50	50	ENSMUST00000213316.2	ENSMUSG00000032180.12	Tmed1	chr9	protein_coding	transmembrane p24 trafficking protein 1
chr9	21420410	21421290	-	21420647	21421290	A3SS	0.33	50	50	ENSMUST00000213316.2	ENSMUSG00000032180.12	Tmed1	chr9	protein_coding	transmembrane p24 trafficking protein 1
chr9	21420410	21421290	-	21420410;21420647	21420550;21421290	ES	0.33	50	50	ENSMUST00000034698.9	ENSMUSG00000032180.12	Tmed1	chr9	protein_coding	transmembrane p24 trafficking protein 1
chr9	21420410	21420585	-	21420410	21420550	A5SS	0.33	50	50	ENSMUST00000034698.9	ENSMUSG00000032180.12	Tmed1	chr9	protein_coding	transmembrane p24 trafficking protein 1
chr9	21419687	21421290	-	21419687;21420410	21420227;21421290	ES	0.33	50	50	ENSMUST00000214285.2	ENSMUSG00000032180.12	Tmed1	chr9	protein_coding	transmembrane p24 trafficking protein 1
chr9	21420410;21420647	21420585;21421290	-	21420410	21421290	cassetteExon	0.5	100	100	ENSMUST00000214285.2	ENSMUSG00000032180.12	Tmed1	chr9	protein_coding	transmembrane p24 trafficking protein 1
chr9	21440379	21450383	+	21440379;21447293	21447204;21450383	ES	0.5	50	50	ENSMUST00000086361.12	ENSMUSG00000057191.14	AB124611	chr9	protein_coding	cDNA sequence AB124611
chr9	21437603;21437905	21437769;21440059	+	21437603	21440059	cassetteExon	0.5	100	100	ENSMUST00000086361.12	ENSMUSG00000057191.14	AB124611	chr9	protein_coding	cDNA sequence AB124611
chr9	21498881	21499345	+	21498881;21499215	21499147;21499345	ES	0.5	50	50	ENSMUST00000034703.15	ENSMUSG00000032185.16	Carm1	chr9	protein_coding	coactivator-associated arginine methyltransferase 1
chr9	21485889;21486310	21486190;21486710	+	21485889	21486710	cassetteExon	0.5	100	100	ENSMUST00000034703.15	ENSMUSG00000032185.16	Carm1	chr9	protein_coding	coactivator-associated arginine methyltransferase 1
chr9	21485889;21486389	21486190;21486710	+	21485889	21486710	cassetteExon	0.5	100	100	ENSMUST00000034703.15	ENSMUSG00000032185.16	Carm1	chr9	protein_coding	coactivator-associated arginine methyltransferase 1
chr9	21486814	21490692	+	21486814	21490695	A3SS	0.5	50	50	ENSMUST00000034703.15	ENSMUSG00000032185.16	Carm1	chr9	protein_coding	coactivator-associated arginine methyltransferase 1
chr9	21498881	21503392	+	21498881	21499345	3pMXE	0.33	50	50	ENSMUST00000115395.10	ENSMUSG00000032185.16	Carm1	chr9	protein_coding	coactivator-associated arginine methyltransferase 1
chr9	21498881	21503392	+	21498881	21499147	3pMXE	0.33	50	50	ENSMUST00000115394.8	ENSMUSG00000032185.16	Carm1	chr9	protein_coding	coactivator-associated arginine methyltransferase 1
chr9	21498881	21499345	+	21498881	21499147	A3SS	0.33	50	50	ENSMUST00000115394.8	ENSMUSG00000032185.16	Carm1	chr9	protein_coding	coactivator-associated arginine methyltransferase 1
chr9	21486310	21486710	+	21486389	21486710	A5SS	0.33	50	50	ENSMUST00000130032.8	ENSMUSG00000032185.16	Carm1	chr9	protein_coding	coactivator-associated arginine methyltransferase 1
chr9	21498881	21499345	+	21499215	21499345	A5SS	0.5	50	50	ENSMUST00000130100.2	ENSMUSG00000032185.16	Carm1	chr9	protein_coding	coactivator-associated arginine methyltransferase 1
chr9	21503514	21504023	-	21503514	21503824	A5SS&ES	0.5	50	50	ENSMUST00000078572.9	ENSMUSG00000032182.16	Yipf2	chr9	protein_coding	Yip1 domain family, member 2
chr9	21503884	21504023	-	21503884	21504033	A5SS	0.5	50	50	ENSMUST00000078572.9	ENSMUSG00000032182.16	Yipf2	chr9	protein_coding	Yip1 domain family, member 2
chr9	21503514	21504023	-	21503514;21503884	21503824;21504023	ES	0.5	50	50	ENSMUST00000180365.9	ENSMUSG00000032182.16	Yipf2	chr9	protein_coding	Yip1 domain family, member 2
chr9	21588973;21589347	21589249;21589612	+	21588973	21589612	cassetteExon	0.5	100	100	ENSMUST00000034707.15	ENSMUSG00000032187.17	Smarca4	chr9	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
chr9	21590443	21597309	+	21590443	21597318	A3SS	0.5	50	50	ENSMUST00000034707.15	ENSMUSG00000032187.17	Smarca4	chr9	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
chr9	21597571	21611099	+	21597571	21611096	A3SS	0.5	50	50	ENSMUST00000034707.15	ENSMUSG00000032187.17	Smarca4	chr9	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
chr9	21655359	21657028	+	21655359;21655681	21655526;21657028	ES	0.5	50	50	ENSMUST00000034713.9	ENSMUSG00000032193.10	Ldlr	chr9	protein_coding	low density lipoprotein receptor
chr9	21667591	21668586	-	21667591;21668489	21668413;21668586	ES	0.5	50	50	ENSMUST00000098942.6	ENSMUSG00000074476.7	Spc24	chr9	protein_coding	SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)
chr9	21669125	21671548	-	21669125	21671415	A5SS	0.5	50	50	ENSMUST00000098942.6	ENSMUSG00000074476.7	Spc24	chr9	protein_coding	SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)
chr9	21667591	21668586	-	21668489	21668586	3pMXE	0.5	50	50	ENSMUST00000214149.2	ENSMUSG00000074476.7	Spc24	chr9	protein_coding	SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)
chr9	21686048	21690997	-	21686048;21687084	21686997;21690997	ES	0.5	50	50	ENSMUST00000034717.7	ENSMUSG00000032194.10	Kank2	chr9	protein_coding	KN motif and ankyrin repeat domains 2
chr9	21707490;21708466	21708272;21709778	-	21707490	21709778	cassetteExon	0.5	100	100	ENSMUST00000034717.7	ENSMUSG00000032194.10	Kank2	chr9	protein_coding	KN motif and ankyrin repeat domains 2
chr9	21736826	21740770	-	21736826;21737171	21737079;21740770	ES	0.5	50	50	ENSMUST00000217336.2	ENSMUSG00000032198.10	Dock6	chr9	protein_coding	dedicator of cytokinesis 6
chr9	21737171	21741510	-	21737171;21740874	21740770;21741510	ES	0.33	50	50	ENSMUST00000217336.2	ENSMUSG00000032198.10	Dock6	chr9	protein_coding	dedicator of cytokinesis 6
chr9	21716088	21720817	-	21716146	21720817	A3SS	0.5	50	50	ENSMUST00000217336.2	ENSMUSG00000032198.10	Dock6	chr9	protein_coding	dedicator of cytokinesis 6
chr9	21734856	21735693	-	21733144	21735693	A3SS	0.5	50	50	ENSMUST00000217336.2	ENSMUSG00000032198.10	Dock6	chr9	protein_coding	dedicator of cytokinesis 6
chr9	21748847	21750047	-	21744937	21750047	A3SS	0.5	50	50	ENSMUST00000217336.2	ENSMUSG00000032198.10	Dock6	chr9	protein_coding	dedicator of cytokinesis 6
chr9	21714199	21715218	-	21714199	21714289	A5SS&ES	0.5	50	50	ENSMUST00000217336.2	ENSMUSG00000032198.10	Dock6	chr9	protein_coding	dedicator of cytokinesis 6
chr9	21736826	21741510	-	21736826;21740874	21740770;21741510	ES	0.33	50	50	ENSMUST00000034728.9	ENSMUSG00000032198.10	Dock6	chr9	protein_coding	dedicator of cytokinesis 6
chr9	21736826;21737171	21737079;21741510	-	21736826;21740874	21740770;21741510	MXE	0.5	100	100	ENSMUST00000034728.9	ENSMUSG00000032198.10	Dock6	chr9	protein_coding	dedicator of cytokinesis 6
chr9	21736826	21741510	-	21736826;21737171	21737079;21741510	ES	0.33	50	50	ENSMUST00000216626.2	ENSMUSG00000032198.10	Dock6	chr9	protein_coding	dedicator of cytokinesis 6
chr9	21827239;21827860	21827713;21829318	-	21827239	21829318	cassetteExon	0.5	100	100	ENSMUST00000115351.10	ENSMUSG00000019066.14	Rab3d	chr9	protein_coding	RAB3D, member RAS oncogene family
chr9	21820177	21826159	-	21826065	21826159	A3SS&ES	0.5	50	50	ENSMUST00000115351.10	ENSMUSG00000019066.14	Rab3d	chr9	protein_coding	RAB3D, member RAS oncogene family
chr9	21827362	21829318	-	21827239	21829318	A3SS	0.33	50	50	ENSMUST00000115351.10	ENSMUSG00000019066.14	Rab3d	chr9	protein_coding	RAB3D, member RAS oncogene family
chr9	21827860	21829318	-	21827362	21829318	A3SS	0.33	50	50	ENSMUST00000122211.8	ENSMUSG00000019066.14	Rab3d	chr9	protein_coding	RAB3D, member RAS oncogene family
chr9	21837653	21837971	-	21837653	21838588	A5SS	0.25	50	50	ENSMUST00000046831.11	ENSMUSG00000040883.19	Tmem205	chr9	protein_coding	transmembrane protein 205
chr9	21837653	21838477	-	21837653	21838588	A5SS	0.25	50	50	ENSMUST00000046831.11	ENSMUSG00000040883.19	Tmem205	chr9	protein_coding	transmembrane protein 205
chr9	21837653	21838583	-	21837653	21838588	A5SS	0.25	50	50	ENSMUST00000046831.11	ENSMUSG00000040883.19	Tmem205	chr9	protein_coding	transmembrane protein 205
chr9	21837653	21837971	-	21837653	21838583	A5SS	0.25	50	50	ENSMUST00000238930.2	ENSMUSG00000040883.19	Tmem205	chr9	protein_coding	transmembrane protein 205
chr9	21837653	21838477	-	21837653	21838583	A5SS	0.25	50	50	ENSMUST00000238930.2	ENSMUSG00000040883.19	Tmem205	chr9	protein_coding	transmembrane protein 205
chr9	21837653	21837971	-	21837653	21838477	A5SS	0.25	50	50	ENSMUST00000213698.2	ENSMUSG00000040883.19	Tmem205	chr9	protein_coding	transmembrane protein 205
chr9	21844286	21844992	+	21844286;21844909	21844842;21844992	ES	0.5	50	50	ENSMUST00000006403.7	ENSMUSG00000006241.17	Ccdc159	chr9	protein_coding	coiled-coil domain containing 159
chr9	21839021	21842995	+	21842639	21842995	A5SS&ES	0.5	50	50	ENSMUST00000006403.7	ENSMUSG00000006241.17	Ccdc159	chr9	protein_coding	coiled-coil domain containing 159
chr9	21839038	21840389	+	21839024	21840389	A5SS	0.5	50	50	ENSMUST00000006403.7	ENSMUSG00000006241.17	Ccdc159	chr9	protein_coding	coiled-coil domain containing 159
chr9	21850674	21852056	+	21850674	21851981	A3SS	0.5	50	50	ENSMUST00000046371.13	ENSMUSG00000040563.14	Plppr2	chr9	protein_coding	phospholipid phosphatase related 2
chr9	21858348	21858677	+	21858364	21858677	A5SS	0.5	50	50	ENSMUST00000046371.13	ENSMUSG00000040563.14	Plppr2	chr9	protein_coding	phospholipid phosphatase related 2
chr9	21899200	21900145	-	21899200;21899571	21899342;21900145	ES	0.5	50	50	ENSMUST00000214026.2	ENSMUSG00000040146.10	Rgl3	chr9	protein_coding	ral guanine nucleotide dissociation stimulator-like 3
chr9	21899195	21899342	-	21899200	21899342	A3SS	0.5	50	50	ENSMUST00000214026.2	ENSMUSG00000040146.10	Rgl3	chr9	protein_coding	ral guanine nucleotide dissociation stimulator-like 3
chr9	21899200	21900145	-	21899571	21900145	A3SS&ES	0.5	50	50	ENSMUST00000214713.2	ENSMUSG00000040146.10	Rgl3	chr9	protein_coding	ral guanine nucleotide dissociation stimulator-like 3
chr9	21904320	21904834	-	21904323	21904834	A3SS	0.5	50	50	ENSMUST00000115336.10	ENSMUSG00000039632.14	Odad3	chr9	protein_coding	outer dynein arm docking complex subunit 3
chr9	21914384	21914695	+	21914388	21914695	A5SS	0.5	50	50	ENSMUST00000216344.2	ENSMUSG00000003402.15	Prkcsh	chr9	protein_coding	protein kinase C substrate 80K-H
chr9	21922892	21922970	+	21922871	21922970	A5SS	0.5	50	50	ENSMUST00000216344.2	ENSMUSG00000003402.15	Prkcsh	chr9	protein_coding	protein kinase C substrate 80K-H
chr9	21948156	21976997	-	21948156	21962886	5pMXE	0.5	50	50	ENSMUST00000003501.9	ENSMUSG00000003410.9	Elavl3	chr9	protein_coding	ELAV like RNA binding protein 3
chr9	21927912	21935970	-	21930150	21935970	A3SS	0.5	50	50	ENSMUST00000003501.9	ENSMUSG00000003410.9	Elavl3	chr9	protein_coding	ELAV like RNA binding protein 3
chr9	21948153	21962886	-	21948156	21962886	A3SS	0.5	50	50	ENSMUST00000003501.9	ENSMUSG00000003410.9	Elavl3	chr9	protein_coding	ELAV like RNA binding protein 3
chr9	21969711	21976997	-	21948156	21976997	A3SS	0.5	50	50	ENSMUST00000213738.2	ENSMUSG00000111842.2	Gm49318	chr9	protein_coding	predicted gene, 49318
chr9	21968998	21969100	-	21968974	21969100	A3SS	0.5	50	50	ENSMUST00000043922.7	ENSMUSG00000038895.17	Zfp653	chr9	protein_coding	zinc finger protein 653
chr9	21982460	21987546	+	21982460;21987379	21987316;21987546	ES	0.5	50	50	ENSMUST00000216270.2	ENSMUSG00000096981.3	Gm16845	chr9	lncRNA	predicted gene, 16845
chr9	21987941	21996645	-	21987941;21989561	21989444;21996645	ES	0.33	50	50	ENSMUST00000179422.8	ENSMUSG00000066839.13	Ecsit	chr9	protein_coding	ECSIT signalling integrator
chr9	21989561;21995504	21995319;21996645	-	21989561	21996645	cassetteExon	0.5	100	100	ENSMUST00000179422.8	ENSMUSG00000066839.13	Ecsit	chr9	protein_coding	ECSIT signalling integrator
chr9	21995504	21996653	-	21995504	21996645	A5SS	0.5	50	50	ENSMUST00000098937.10	ENSMUSG00000066839.13	Ecsit	chr9	protein_coding	ECSIT signalling integrator
chr9	21987941	21996645	-	21987941	21989444	A5SS&ES	0.5	50	50	ENSMUST00000180180.8	ENSMUSG00000066839.13	Ecsit	chr9	protein_coding	ECSIT signalling integrator
chr9	21989561	21996645	-	21989561	21995319	A5SS&ES	0.5	50	50	ENSMUST00000180180.8	ENSMUSG00000066839.13	Ecsit	chr9	protein_coding	ECSIT signalling integrator
chr9	21995504	21996645	-	21987941	21996645	A3SS	0.33	50	50	ENSMUST00000177967.2	ENSMUSG00000066839.13	Ecsit	chr9	protein_coding	ECSIT signalling integrator
chr9	22011524	22012437	+	22010714	22012437	A5SS	0.5	50	50	ENSMUST00000214601.2	ENSMUSG00000001349.6	Cnn1	chr9	protein_coding	calponin 1
chr9	22015838	22016666	+	22015668	22016666	A5SS	0.5	50	50	ENSMUST00000214601.2	ENSMUSG00000001349.6	Cnn1	chr9	protein_coding	calponin 1
chr9	22025239	22027951	-	22025239	22028406	A5SS	0.33	50	50	ENSMUST00000013966.8	ENSMUSG00000013822.8	Elof1	chr9	protein_coding	ELF1 homolog, elongation factor 1
chr9	22025239	22028233	-	22025239	22028406	A5SS	0.33	50	50	ENSMUST00000013966.8	ENSMUSG00000013822.8	Elof1	chr9	protein_coding	ELF1 homolog, elongation factor 1
chr9	22025239	22027951	-	22025239	22028233	A5SS	0.33	50	50	ENSMUST00000214394.2	ENSMUSG00000013822.8	Elof1	chr9	protein_coding	ELF1 homolog, elongation factor 1
chr9	22041425	22046909	-	22041425	22043033	5pMXE	0.25	50	50	ENSMUST00000069330.14	ENSMUSG00000001348.16	Acp5	chr9	protein_coding	acid phosphatase 5, tartrate resistant
chr9	22041425;22041904	22041819;22043033	-	22041425	22043033	cassetteExon	0.5	100	100	ENSMUST00000069330.14	ENSMUSG00000001348.16	Acp5	chr9	protein_coding	acid phosphatase 5, tartrate resistant
chr9	22041425	22042797	-	22041425	22043033	A5SS	0.25	50	50	ENSMUST00000069330.14	ENSMUSG00000001348.16	Acp5	chr9	protein_coding	acid phosphatase 5, tartrate resistant
chr9	22044235	22046909	-	22041425	22046909	A3SS	0.5	50	50	ENSMUST00000165735.9	ENSMUSG00000001348.16	Acp5	chr9	protein_coding	acid phosphatase 5, tartrate resistant
chr9	22041425	22041819	-	22041425	22046909	A5SS	0.25	50	50	ENSMUST00000165735.9	ENSMUSG00000001348.16	Acp5	chr9	protein_coding	acid phosphatase 5, tartrate resistant
chr9	22041425	22042797	-	22041425	22046909	A5SS	0.25	50	50	ENSMUST00000165735.9	ENSMUSG00000001348.16	Acp5	chr9	protein_coding	acid phosphatase 5, tartrate resistant
chr9	22041425	22042797	-	22041425	22041819	5pMXE	0.25	50	50	ENSMUST00000115315.3	ENSMUSG00000001348.16	Acp5	chr9	protein_coding	acid phosphatase 5, tartrate resistant
chr9	22041425	22043033	-	22041425	22041819	5pMXE	0.25	50	50	ENSMUST00000115315.3	ENSMUSG00000001348.16	Acp5	chr9	protein_coding	acid phosphatase 5, tartrate resistant
chr9	22068323	22069028	+	22068209	22069028	A5SS	0.5	50	50	ENSMUST00000123680.2	ENSMUSG00000010607.9	Pigyl	chr9	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Y-like
chr9	22099527	22108363	+	22099469	22108363	A5SS	0.5	50	50	ENSMUST00000217301.2	ENSMUSG00000074472.11	Zfp872	chr9	protein_coding	zinc finger protein 872
chr9	22146442	22147324	+	22146442	22149838	A3SS	0.33	50	50	ENSMUST00000215902.2	ENSMUSG00000057982.9	Zfp809	chr9	protein_coding	zinc finger protein 809
chr9	22146442	22147498	+	22146442	22149838	A3SS	0.33	50	50	ENSMUST00000215902.2	ENSMUSG00000057982.9	Zfp809	chr9	protein_coding	zinc finger protein 809
chr9	22137366	22146316	+	22137128	22146316	A5SS	0.5	50	50	ENSMUST00000215902.2	ENSMUSG00000057982.9	Zfp809	chr9	protein_coding	zinc finger protein 809
chr9	22149080	22149838	+	22146442	22149838	A5SS	0.5	50	50	ENSMUST00000215902.2	ENSMUSG00000057982.9	Zfp809	chr9	protein_coding	zinc finger protein 809
chr9	22146442	22147498	+	22146442	22147324	A3SS	0.33	50	50	ENSMUST00000213371.2	ENSMUSG00000057982.9	Zfp809	chr9	protein_coding	zinc finger protein 809
chr9	22190576	22194464	-	22190576;22191855	22191749;22194464	ES	0.5	50	50	ENSMUST00000086278.7	ENSMUSG00000066829.8	Zfp810	chr9	protein_coding	zinc finger protein 810
chr9	22216898	22217821	-	22216898	22218845	A5SS	0.5	50	50	ENSMUST00000086278.7	ENSMUSG00000066829.8	Zfp810	chr9	protein_coding	zinc finger protein 810
chr9	22250384;22260596	22260543;22262216	-	22250384	22262216	cassetteExon	0.5	100	100	ENSMUST00000040912.9	ENSMUSG00000036777.9	Anln	chr9	protein_coding	anillin, actin binding protein
chr9	22263411	22263510	-	22263193	22263510	A3SS	0.5	50	50	ENSMUST00000040912.9	ENSMUSG00000036777.9	Anln	chr9	protein_coding	anillin, actin binding protein
chr9	22370037	22379860	-	22370037	22379370	5pMXE	0.5	50	50	ENSMUST00000215715.2	ENSMUSG00000032239.11	Rp9	chr9	protein_coding	retinitis pigmentosa 9 (human)
chr9	22360150	22361098	-	22323241	22361098	A3SS	0.5	50	50	ENSMUST00000215715.2	ENSMUSG00000032239.11	Rp9	chr9	protein_coding	retinitis pigmentosa 9 (human)
chr9	22323045	22335808	+	22323045	22335409	A3SS	0.33	50	50	ENSMUST00000058868.9	ENSMUSG00000036411.11	9530077C05Rik	chr9	protein_coding	RIKEN cDNA 9530077C05 gene
chr9	22345646	22346391	+	22343104	22346391	A5SS	0.5	50	50	ENSMUST00000058868.9	ENSMUSG00000036411.11	9530077C05Rik	chr9	protein_coding	RIKEN cDNA 9530077C05 gene
chr9	22323045	22335409	+	22323045	22342972	A3SS	0.33	50	50	ENSMUST00000213598.2	ENSMUSG00000036411.11	9530077C05Rik	chr9	protein_coding	RIKEN cDNA 9530077C05 gene
chr9	22323045	22335808	+	22323045	22342972	A3SS	0.33	50	50	ENSMUST00000213598.2	ENSMUSG00000036411.11	9530077C05Rik	chr9	protein_coding	RIKEN cDNA 9530077C05 gene
chr9	22341795	22342972	+	22323045	22342972	A5SS	0.5	50	50	ENSMUST00000213598.2	ENSMUSG00000036411.11	9530077C05Rik	chr9	protein_coding	RIKEN cDNA 9530077C05 gene
chr9	22387351;22387921	22387866;22402114	+	22387351	22402114	cassetteExon	0.5	100	100	ENSMUST00000039798.16	ENSMUSG00000035919.17	Bbs9	chr9	protein_coding	Bardet-Biedl syndrome 9 (human)
chr9	22557364;22559330	22559316;22566521	+	22557364	22566521	cassetteExon	0.5	100	100	ENSMUST00000039798.16	ENSMUSG00000035919.17	Bbs9	chr9	protein_coding	Bardet-Biedl syndrome 9 (human)
chr9	22387486	22402114	+	22387351	22402114	A5SS	0.25	50	50	ENSMUST00000039798.16	ENSMUSG00000035919.17	Bbs9	chr9	protein_coding	Bardet-Biedl syndrome 9 (human)
chr9	22400886	22402114	+	22387351	22402114	A5SS	0.25	50	50	ENSMUST00000039798.16	ENSMUSG00000035919.17	Bbs9	chr9	protein_coding	Bardet-Biedl syndrome 9 (human)
chr9	22423864	22425276	+	22415405	22425276	A5SS	0.5	50	50	ENSMUST00000039798.16	ENSMUSG00000035919.17	Bbs9	chr9	protein_coding	Bardet-Biedl syndrome 9 (human)
chr9	22485804	22486407	+	22479175	22486407	A5SS	0.5	50	50	ENSMUST00000039798.16	ENSMUSG00000035919.17	Bbs9	chr9	protein_coding	Bardet-Biedl syndrome 9 (human)
chr9	22565384	22566521	+	22557364	22566521	A5SS	0.33	50	50	ENSMUST00000039798.16	ENSMUSG00000035919.17	Bbs9	chr9	protein_coding	Bardet-Biedl syndrome 9 (human)
chr9	22387921;22400886	22400842;22402114	+	22387921	22402114	cassetteExon	0.5	100	100	ENSMUST00000150395.8	ENSMUSG00000035919.17	Bbs9	chr9	protein_coding	Bardet-Biedl syndrome 9 (human)
chr9	22387486	22387866	+	22387351	22387866	A5SS	0.5	50	50	ENSMUST00000150395.8	ENSMUSG00000035919.17	Bbs9	chr9	protein_coding	Bardet-Biedl syndrome 9 (human)
chr9	22387486	22402114	+	22387921	22402114	A5SS&ES	0.25	50	50	ENSMUST00000150395.8	ENSMUSG00000035919.17	Bbs9	chr9	protein_coding	Bardet-Biedl syndrome 9 (human)
chr9	22387486	22402114	+	22400886	22402114	A5SS&ES	0.25	50	50	ENSMUST00000142313.8	ENSMUSG00000035919.17	Bbs9	chr9	protein_coding	Bardet-Biedl syndrome 9 (human)
chr9	22387486;22387921	22387866;22402114	+	22387486	22402114	cassetteExon	0.5	100	100	ENSMUST00000147712.8	ENSMUSG00000035919.17	Bbs9	chr9	protein_coding	Bardet-Biedl syndrome 9 (human)
chr9	22387351	22402114	+	22387921	22402114	A5SS&ES	0.25	50	50	ENSMUST00000128812.8	ENSMUSG00000035919.17	Bbs9	chr9	protein_coding	Bardet-Biedl syndrome 9 (human)
chr9	22559330;22565384	22565368;22566521	+	22559330	22566521	cassetteExon	0.5	100	100	ENSMUST00000147405.8	ENSMUSG00000035919.17	Bbs9	chr9	protein_coding	Bardet-Biedl syndrome 9 (human)
chr9	23292770	23317791	+	23292770;23310975	23310646;23317791	ES	0.5	50	50	ENSMUST00000071982.7	ENSMUSG00000031963.9	Bmper	chr9	protein_coding	BMP-binding endothelial regulator
chr9	23136139	23139604	+	23136139	23165668	A3SS	0.5	50	50	ENSMUST00000071982.7	ENSMUSG00000031963.9	Bmper	chr9	protein_coding	BMP-binding endothelial regulator
chr9	24009362	24009455	+	24009328	24009455	A5SS	0.5	50	50	ENSMUST00000133787.8	ENSMUSG00000043659.12	Npsr1	chr9	protein_coding	neuropeptide S receptor 1
chr9	24194796	24198053	+	24165999	24198053	A5SS	0.5	50	50	ENSMUST00000133787.8	ENSMUSG00000043659.12	Npsr1	chr9	protein_coding	neuropeptide S receptor 1
chr9	24386749	24393225	-	24386749;24389123	24388945;24393225	ES	0.5	50	50	ENSMUST00000115277.9	ENSMUSG00000043067.16	Dpy19l1	chr9	protein_coding	dpy-19-like 1 (C. elegans)
chr9	24397025	24405244	-	24397025	24399083	5pMXE	0.33	50	50	ENSMUST00000115277.9	ENSMUSG00000043067.16	Dpy19l1	chr9	protein_coding	dpy-19-like 1 (C. elegans)
chr9	24397025	24414135	-	24397025	24399083	5pMXE	0.33	50	50	ENSMUST00000115277.9	ENSMUSG00000043067.16	Dpy19l1	chr9	protein_coding	dpy-19-like 1 (C. elegans)
chr9	24397025	24405244	-	24397025	24414135	A5SS	0.33	50	50	ENSMUST00000142064.8	ENSMUSG00000043067.16	Dpy19l1	chr9	protein_coding	dpy-19-like 1 (C. elegans)
chr9	24651625	24661608	-	24639168	24661608	A3SS	0.33	50	50	ENSMUST00000052946.12	ENSMUSG00000031965.16	Tbx20	chr9	protein_coding	T-box 20
chr9	24651999	24661608	-	24639168	24661608	A3SS	0.33	50	50	ENSMUST00000052946.12	ENSMUSG00000031965.16	Tbx20	chr9	protein_coding	T-box 20
chr9	24668635	24670022	-	24661684	24670022	A3SS	0.5	50	50	ENSMUST00000052946.12	ENSMUSG00000031965.16	Tbx20	chr9	protein_coding	T-box 20
chr9	24651999	24661608	-	24651625	24661608	A3SS	0.33	50	50	ENSMUST00000215802.2	ENSMUSG00000031965.16	Tbx20	chr9	protein_coding	T-box 20
chr9	25163995;25175503	25175499;25176690	+	25163995;25176602	25176598;25176690	MXE	0.5	100	100	ENSMUST00000115272.9	ENSMUSG00000001833.18	Septin7	chr9	protein_coding	septin 7
chr9	25163995;25175503	25175502;25176690	+	25163995;25176602	25176598;25176690	MXE	0.5	100	100	ENSMUST00000115272.9	ENSMUSG00000001833.18	Septin7	chr9	protein_coding	septin 7
chr9	25176792	25186527	+	25176792	25188840	A3SS	0.25	50	50	ENSMUST00000115272.9	ENSMUSG00000001833.18	Septin7	chr9	protein_coding	septin 7
chr9	25176792	25186591	+	25176792	25188840	A3SS	0.25	50	50	ENSMUST00000115272.9	ENSMUSG00000001833.18	Septin7	chr9	protein_coding	septin 7
chr9	25176792	25186630	+	25176792	25188840	A3SS	0.25	50	50	ENSMUST00000115272.9	ENSMUSG00000001833.18	Septin7	chr9	protein_coding	septin 7
chr9	25199614	25200874	+	25199614	25204981	A3SS	0.5	50	50	ENSMUST00000115272.9	ENSMUSG00000001833.18	Septin7	chr9	protein_coding	septin 7
chr9	25163995	25175502	+	25163995	25175499	A3SS	0.33	50	50	ENSMUST00000165594.4	ENSMUSG00000001833.18	Septin7	chr9	protein_coding	septin 7
chr9	25176792	25186591	+	25176792	25186527	A3SS	0.25	50	50	ENSMUST00000215692.2	ENSMUSG00000001833.18	Septin7	chr9	protein_coding	septin 7
chr9	25176792	25186630	+	25176792	25186527	A3SS	0.25	50	50	ENSMUST00000215692.2	ENSMUSG00000001833.18	Septin7	chr9	protein_coding	septin 7
chr9	25176792	25186630	+	25176792	25186591	A3SS	0.25	50	50	ENSMUST00000215721.2	ENSMUSG00000001833.18	Septin7	chr9	protein_coding	septin 7
chr9	25176602	25176690	+	25175503	25176690	A5SS	0.5	50	50	ENSMUST00000214911.2	ENSMUSG00000001833.18	Septin7	chr9	protein_coding	septin 7
chr9	25394615	25398398	+	25394615	25458848	A3SS	0.5	50	50	ENSMUST00000040677.6	ENSMUSG00000036611.6	Eepd1	chr9	protein_coding	endonuclease/exonuclease/phosphatase family domain containing 1
chr9	26639805	26641459	-	26633878	26641459	A3SS	0.5	50	50	ENSMUST00000216969.2	ENSMUSG00000110901.2	Gm48393	chr9	lncRNA	predicted gene, 48393
chr9	26669089	26673874	+	26669089	26670445	3pMXE	0.33	50	50	ENSMUST00000160899.8	ENSMUSG00000045994.18	B3gat1	chr9	protein_coding	beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)
chr9	26669089	26673946	+	26669089	26670445	3pMXE	0.33	50	50	ENSMUST00000160899.8	ENSMUSG00000045994.18	B3gat1	chr9	protein_coding	beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)
chr9	26669089	26673946	+	26669089	26673874	A3SS	0.33	50	50	ENSMUST00000159799.8	ENSMUSG00000045994.18	B3gat1	chr9	protein_coding	beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)
chr9	26707899	26717594	-	26707899;26708388	26708341;26717594	ES	0.33	50	50	ENSMUST00000040398.14	ENSMUSG00000036395.16	Glb1l2	chr9	protein_coding	galactosidase, beta 1-like 2
chr9	26692062;26702189	26702020;26703078	-	26692062	26703078	cassetteExon	0.5	100	100	ENSMUST00000040398.14	ENSMUSG00000036395.16	Glb1l2	chr9	protein_coding	galactosidase, beta 1-like 2
chr9	26707899	26708065	-	26707899	26708341	A5SS	0.33	50	50	ENSMUST00000040398.14	ENSMUSG00000036395.16	Glb1l2	chr9	protein_coding	galactosidase, beta 1-like 2
chr9	26707899;26708388	26708065;26717594	-	26707899	26717594	cassetteExon	0.5	100	100	ENSMUST00000066560.13	ENSMUSG00000036395.16	Glb1l2	chr9	protein_coding	galactosidase, beta 1-like 2
chr9	26707899	26717594	-	26703186	26717594	A3SS	0.33	50	50	ENSMUST00000162702.8	ENSMUSG00000036395.16	Glb1l2	chr9	protein_coding	galactosidase, beta 1-like 2
chr9	26708388	26717594	-	26703186	26717594	A3SS	0.33	50	50	ENSMUST00000162702.8	ENSMUSG00000036395.16	Glb1l2	chr9	protein_coding	galactosidase, beta 1-like 2
chr9	26703186	26705379	-	26703186	26717594	A5SS	0.5	50	50	ENSMUST00000162702.8	ENSMUSG00000036395.16	Glb1l2	chr9	protein_coding	galactosidase, beta 1-like 2
chr9	26737044	26737609	-	26737047	26737609	A3SS	0.5	50	50	ENSMUST00000034448.6	ENSMUSG00000031966.8	Glb1l3	chr9	protein_coding	galactosidase, beta 1 like 3
chr9	26729847	26735588	-	26729847	26736033	A5SS	0.5	50	50	ENSMUST00000034448.6	ENSMUSG00000031966.8	Glb1l3	chr9	protein_coding	galactosidase, beta 1 like 3
chr9	26740400	26740759	-	26740400	26742557	A5SS	0.5	50	50	ENSMUST00000034448.6	ENSMUSG00000031966.8	Glb1l3	chr9	protein_coding	galactosidase, beta 1 like 3
chr9	26800977	26805543	-	26800977;26804959	26804847;26805543	ES	0.33	50	50	ENSMUST00000217197.2	ENSMUSG00000079644.3	Gm1110	chr9	protein_coding	predicted gene 1110
chr9	26804953	26805543	-	26804959	26805543	A3SS	0.33	50	50	ENSMUST00000217197.2	ENSMUSG00000079644.3	Gm1110	chr9	protein_coding	predicted gene 1110
chr9	26795122	26800831	-	26795122	26800828	A5SS	0.5	50	50	ENSMUST00000217197.2	ENSMUSG00000079644.3	Gm1110	chr9	protein_coding	predicted gene 1110
chr9	26800977;26804953	26804847;26805543	-	26800977	26805543	cassetteExon	0.5	100	100	ENSMUST00000214847.2	ENSMUSG00000079644.3	Gm1110	chr9	protein_coding	predicted gene 1110
chr9	26901988	26903456	-	26901988;26902705	26902536;26903456	ES	0.5	50	50	ENSMUST00000120367.8	ENSMUSG00000031969.17	Acad8	chr9	protein_coding	acyl-Coenzyme A dehydrogenase family, member 8
chr9	26901492	26902536	-	26901988	26902536	A3SS&ES	0.5	50	50	ENSMUST00000120367.8	ENSMUSG00000031969.17	Acad8	chr9	protein_coding	acyl-Coenzyme A dehydrogenase family, member 8
chr9	26903584	26910690	-	26903556	26910690	A3SS	0.5	50	50	ENSMUST00000120367.8	ENSMUSG00000031969.17	Acad8	chr9	protein_coding	acyl-Coenzyme A dehydrogenase family, member 8
chr9	26901492	26902536	-	26901492;26901988	26901879;26902536	ES	0.5	50	50	ENSMUST00000060513.8	ENSMUSG00000031969.17	Acad8	chr9	protein_coding	acyl-Coenzyme A dehydrogenase family, member 8
chr9	26901492;26902705	26902536;26903456	-	26901492;26901988	26901879;26903456	MXE	0.5	100	100	ENSMUST00000215693.2	ENSMUSG00000031969.17	Acad8	chr9	protein_coding	acyl-Coenzyme A dehydrogenase family, member 8
chr9	26901988	26903456	-	26902705	26903456	3pMXE	0.5	50	50	ENSMUST00000138102.2	ENSMUSG00000031969.17	Acad8	chr9	protein_coding	acyl-Coenzyme A dehydrogenase family, member 8
chr9	26915074	26916442	+	26915060	26916442	A5SS	0.5	50	50	ENSMUST00000214910.2	ENSMUSG00000035443.11	Thyn1	chr9	protein_coding	thymocyte nuclear protein 1
chr9	26917743;26918247	26918097;26918454	+	26917743	26918454	cassetteExon	0.5	100	100	ENSMUST00000213770.2	ENSMUSG00000035443.11	Thyn1	chr9	protein_coding	thymocyte nuclear protein 1
chr9	26918247	26918457	+	26918247	26918454	A3SS	0.5	50	50	ENSMUST00000213683.2	ENSMUSG00000035443.11	Thyn1	chr9	protein_coding	thymocyte nuclear protein 1
chr9	26941795	26948281	+	26941795;26942126	26941919;26948281	ES	0.5	50	50	ENSMUST00000073127.14	ENSMUSG00000035024.17	Ncapd3	chr9	protein_coding	non-SMC condensin II complex, subunit D3
chr9	26994676;26994936	26994902;26997236	+	26994676	26997236	cassetteExon	0.5	100	100	ENSMUST00000073127.14	ENSMUSG00000035024.17	Ncapd3	chr9	protein_coding	non-SMC condensin II complex, subunit D3
chr9	26985760	26993702	+	26984098	26993702	A5SS	0.5	50	50	ENSMUST00000073127.14	ENSMUSG00000035024.17	Ncapd3	chr9	protein_coding	non-SMC condensin II complex, subunit D3
chr9	26941795	26948281	+	26942126	26948281	5pMXE	0.5	50	50	ENSMUST00000216677.2	ENSMUSG00000035024.17	Ncapd3	chr9	protein_coding	non-SMC condensin II complex, subunit D3
chr9	27017710	27037616	-	27017710	27066587	A5SS	0.33	50	50	ENSMUST00000034472.16	ENSMUSG00000031990.16	Jam3	chr9	protein_coding	junction adhesion molecule 3
chr9	27017710	27059889	-	27017710	27066587	A5SS	0.33	50	50	ENSMUST00000034472.16	ENSMUSG00000031990.16	Jam3	chr9	protein_coding	junction adhesion molecule 3
chr9	27017710	27059889	-	27017710	27037616	5pMXE	0.33	50	50	ENSMUST00000215446.2	ENSMUSG00000031990.16	Jam3	chr9	protein_coding	junction adhesion molecule 3
chr9	27235584	27238142	+	27235596	27238142	A5SS	0.5	50	50	ENSMUST00000214357.2	ENSMUSG00000034275.19	Igsf9b	chr9	protein_coding	immunoglobulin superfamily, member 9B
chr9	27308472;27308649	27308521;27308999	+	27308472	27308999	cassetteExon	0.5	100	100	ENSMUST00000214158.2	ENSMUSG00000031991.11	Spata19	chr9	protein_coding	spermatogenesis associated 19
chr9	27308472;27308834	27308521;27308999	+	27308472	27308999	cassetteExon	0.5	100	100	ENSMUST00000214158.2	ENSMUSG00000031991.11	Spata19	chr9	protein_coding	spermatogenesis associated 19
chr9	27308242	27308416	+	27308152	27308416	A5SS	0.5	50	50	ENSMUST00000214158.2	ENSMUSG00000031991.11	Spata19	chr9	protein_coding	spermatogenesis associated 19
chr9	27308834	27308999	+	27308649	27308999	A5SS	0.33	50	50	ENSMUST00000214240.2	ENSMUSG00000031991.11	Spata19	chr9	protein_coding	spermatogenesis associated 19
chr9	27308472	27308999	+	27308834	27308999	5pMXE	0.33	50	50	ENSMUST00000215658.2	ENSMUSG00000031991.11	Spata19	chr9	protein_coding	spermatogenesis associated 19
chr9	27308472	27308999	+	27308649	27308999	5pMXE	0.33	50	50	ENSMUST00000214287.2	ENSMUSG00000031991.11	Spata19	chr9	protein_coding	spermatogenesis associated 19
chr9	27702742	27940803	+	27702742	28315624	A3SS	0.5	50	50	ENSMUST00000115243.9	ENSMUSG00000062257.14	Opcml	chr9	protein_coding	opioid binding protein/cell adhesion molecule-like
chr9	28315708	28315920	+	28315708	28586430	A3SS	0.33	50	50	ENSMUST00000115243.9	ENSMUSG00000062257.14	Opcml	chr9	protein_coding	opioid binding protein/cell adhesion molecule-like
chr9	28315708	28561197	+	28315708	28586430	A3SS	0.33	50	50	ENSMUST00000115243.9	ENSMUSG00000062257.14	Opcml	chr9	protein_coding	opioid binding protein/cell adhesion molecule-like
chr9	28724708	28812812	+	28724708	28812815	A3SS	0.5	50	50	ENSMUST00000115243.9	ENSMUSG00000062257.14	Opcml	chr9	protein_coding	opioid binding protein/cell adhesion molecule-like
chr9	28573547	28586430	+	28315708	28586430	A5SS	0.5	50	50	ENSMUST00000115243.9	ENSMUSG00000062257.14	Opcml	chr9	protein_coding	opioid binding protein/cell adhesion molecule-like
chr9	28315708	28561197	+	28315708	28315920	3pMXE	0.33	50	50	ENSMUST00000133142.2	ENSMUSG00000062257.14	Opcml	chr9	protein_coding	opioid binding protein/cell adhesion molecule-like
chr9	28110113	28110359	+	28110113	28110456	A3SS	0.5	50	50	ENSMUST00000134006.8	ENSMUSG00000087531.8	Gm15606	chr9	lncRNA	predicted gene 15606
chr9	28907930;28912033	28912001;28920522	-	28907930	28920522	cassetteExon	0.5	100	100	ENSMUST00000075069.11	ENSMUSG00000059974.11	Ntm	chr9	protein_coding	neurotrimin
chr9	29322936;29585700	29585577;29874141	-	29322936	29874141	cassetteExon	0.5	100	100	ENSMUST00000075069.11	ENSMUSG00000059974.11	Ntm	chr9	protein_coding	neurotrimin
chr9	28917585	28920522	-	28907930	28920522	A3SS	0.33	50	50	ENSMUST00000075069.11	ENSMUSG00000059974.11	Ntm	chr9	protein_coding	neurotrimin
chr9	29853398	29874141	-	29322936	29874141	A3SS	0.33	50	50	ENSMUST00000075069.11	ENSMUSG00000059974.11	Ntm	chr9	protein_coding	neurotrimin
chr9	29020817	29020981	-	29020817	29090318	A5SS	0.5	50	50	ENSMUST00000075069.11	ENSMUSG00000059974.11	Ntm	chr9	protein_coding	neurotrimin
chr9	29090550	29096901	-	29090550	29322852	A5SS	0.5	50	50	ENSMUST00000075069.11	ENSMUSG00000059974.11	Ntm	chr9	protein_coding	neurotrimin
chr9	28912033	28920522	-	28912033;28917585	28917550;28920522	ES	0.33	50	50	ENSMUST00000155308.8	ENSMUSG00000059974.11	Ntm	chr9	protein_coding	neurotrimin
chr9	29853398	29874141	-	29585700	29874141	A3SS	0.33	50	50	ENSMUST00000146651.2	ENSMUSG00000059974.11	Ntm	chr9	protein_coding	neurotrimin
chr9	30351521	30374516	+	30351521;30373711	30373527;30374516	ES	0.5	50	50	ENSMUST00000164099.3	ENSMUSG00000031993.8	Snx19	chr9	protein_coding	sorting nexin 19
chr9	30823109	30832097	-	30823109	30832577	A5SS	0.5	50	50	ENSMUST00000065112.7	ENSMUSG00000033453.9	Adamts15	chr9	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 15
chr9	30862801	30864652	+	30862801;30864026	30863891;30864652	ES	0.5	50	50	ENSMUST00000068135.13	ENSMUSG00000031994.14	Adamts8	chr9	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 8
chr9	30897757	30897919	-	30868156	30897919	A3SS	0.5	50	50	ENSMUST00000214688.2	ENSMUSG00000111673.2	Gm29724	chr9	lncRNA	predicted gene, 29724
chr9	30898028	30921259	-	30898028	30942324	A5SS	0.5	50	50	ENSMUST00000214688.2	ENSMUSG00000111673.2	Gm29724	chr9	lncRNA	predicted gene, 29724
chr9	30965609	30967712	+	30965609	30973337	A3SS	0.5	50	50	ENSMUST00000216649.2	ENSMUSG00000047412.17	Zbtb44	chr9	protein_coding	zinc finger and BTB domain containing 44
chr9	30973421	30975475	+	30973421	30975529	A3SS	0.5	50	50	ENSMUST00000216649.2	ENSMUSG00000047412.17	Zbtb44	chr9	protein_coding	zinc finger and BTB domain containing 44
chr9	30978255	30980041	+	30978038	30980041	A5SS	0.5	50	50	ENSMUST00000216649.2	ENSMUSG00000047412.17	Zbtb44	chr9	protein_coding	zinc finger and BTB domain containing 44
chr9	31019578	31042842	-	31019578;31020026	31019867;31042842	ES	0.33	50	50	ENSMUST00000034478.3	ENSMUSG00000031995.10	St14	chr9	protein_coding	suppression of tumorigenicity 14 (colon carcinoma)
chr9	31020026;31041194	31041039;31042842	-	31020026	31042842	cassetteExon	0.5	100	100	ENSMUST00000034478.3	ENSMUSG00000031995.10	St14	chr9	protein_coding	suppression of tumorigenicity 14 (colon carcinoma)
chr9	31041194	31042842	-	31019578	31042842	A3SS	0.33	50	50	ENSMUST00000214418.2	ENSMUSG00000031995.10	St14	chr9	protein_coding	suppression of tumorigenicity 14 (colon carcinoma)
chr9	31064795;31067521	31067486;31068991	-	31064795	31068991	cassetteExon	0.5	100	100	ENSMUST00000217641.2	ENSMUSG00000031996.18	Aplp2	chr9	protein_coding	amyloid beta (A4) precursor-like protein 2
chr9	31075969;31079024	31078857;31080004	-	31075969	31080004	cassetteExon	0.5	100	100	ENSMUST00000217641.2	ENSMUSG00000031996.18	Aplp2	chr9	protein_coding	amyloid beta (A4) precursor-like protein 2
chr9	31064795	31068991	-	31064795	31067486	5pMXE	0.5	50	50	ENSMUST00000214396.2	ENSMUSG00000031996.18	Aplp2	chr9	protein_coding	amyloid beta (A4) precursor-like protein 2
chr9	31064795	31068991	-	31067521	31068991	3pMXE	0.5	50	50	ENSMUST00000213254.2	ENSMUSG00000031996.18	Aplp2	chr9	protein_coding	amyloid beta (A4) precursor-like protein 2
chr9	31075969	31080004	-	31075969	31078857	5pMXE	0.5	50	50	ENSMUST00000217516.2	ENSMUSG00000031996.18	Aplp2	chr9	protein_coding	amyloid beta (A4) precursor-like protein 2
chr9	31229867	31236977	+	31229867	31236923	A3SS	0.33	50	50	ENSMUST00000117389.8	ENSMUSG00000042496.19	Prdm10	chr9	protein_coding	PR domain containing 10
chr9	31229867	31238539	+	31229867	31236923	A3SS&ES	0.33	50	50	ENSMUST00000117389.8	ENSMUSG00000042496.19	Prdm10	chr9	protein_coding	PR domain containing 10
chr9	31191962	31224723	+	31191958	31224723	A5SS	0.5	50	50	ENSMUST00000117389.8	ENSMUSG00000042496.19	Prdm10	chr9	protein_coding	PR domain containing 10
chr9	31273795;31279030	31278995;31282120	+	31273795	31282120	cassetteExon	0.5	100	100	ENSMUST00000215499.2	ENSMUSG00000042496.19	Prdm10	chr9	protein_coding	PR domain containing 10
chr9	31229867	31238539	+	31229867	31236977	A3SS&ES	0.33	50	50	ENSMUST00000215499.2	ENSMUSG00000042496.19	Prdm10	chr9	protein_coding	PR domain containing 10
chr9	31265881	31268360	+	31265881	31268438	A3SS	0.5	50	50	ENSMUST00000215499.2	ENSMUSG00000042496.19	Prdm10	chr9	protein_coding	PR domain containing 10
chr9	31272257	31273627	+	31272218	31273627	A5SS	0.5	50	50	ENSMUST00000215499.2	ENSMUSG00000042496.19	Prdm10	chr9	protein_coding	PR domain containing 10
chr9	31307793	31308090	+	31307793	31308332	A3SS	0.33	50	50	ENSMUST00000086167.12	ENSMUSG00000042185.15	Nfrkb	chr9	protein_coding	nuclear factor related to kappa B binding protein
chr9	31307793	31308296	+	31307793	31308332	A3SS	0.33	50	50	ENSMUST00000086167.12	ENSMUSG00000042185.15	Nfrkb	chr9	protein_coding	nuclear factor related to kappa B binding protein
chr9	31298077	31300173	+	31297566	31300173	A5SS	0.5	50	50	ENSMUST00000086167.12	ENSMUSG00000042185.15	Nfrkb	chr9	protein_coding	nuclear factor related to kappa B binding protein
chr9	31303620	31305999	+	31303460	31305999	A5SS	0.5	50	50	ENSMUST00000086167.12	ENSMUSG00000042185.15	Nfrkb	chr9	protein_coding	nuclear factor related to kappa B binding protein
chr9	31308501	31309016	+	31308433	31309016	A5SS	0.5	50	50	ENSMUST00000086167.12	ENSMUSG00000042185.15	Nfrkb	chr9	protein_coding	nuclear factor related to kappa B binding protein
chr9	31307793	31308296	+	31307793	31308090	A3SS	0.33	50	50	ENSMUST00000132329.8	ENSMUSG00000042185.15	Nfrkb	chr9	protein_coding	nuclear factor related to kappa B binding protein
chr9	31340475	31375462	-	31340475;31342816	31342617;31375462	ES	0.33	50	50	ENSMUST00000048050.9	ENSMUSG00000041737.9	Tmem45b	chr9	protein_coding	transmembrane protein 45b
chr9	31342816;31372335	31372200;31375462	-	31342816	31375462	cassetteExon	0.5	100	100	ENSMUST00000048050.9	ENSMUSG00000041737.9	Tmem45b	chr9	protein_coding	transmembrane protein 45b
chr9	31372335	31375462	-	31340475	31375462	A3SS	0.33	50	50	ENSMUST00000217007.2	ENSMUSG00000041737.9	Tmem45b	chr9	protein_coding	transmembrane protein 45b
chr9	32063309;32064005	32063964;32064336	+	32063309	32064336	cassetteExon	0.5	100	100	ENSMUST00000174641.8	ENSMUSG00000041444.15	Arhgap32	chr9	protein_coding	Rho GTPase activating protein 32
chr9	32118945	32119480	+	32101357	32119480	A5SS	0.5	50	50	ENSMUST00000174641.8	ENSMUSG00000041444.15	Arhgap32	chr9	protein_coding	Rho GTPase activating protein 32
chr9	32135883	32150558	+	32119561	32150558	A5SS	0.33	50	50	ENSMUST00000174641.8	ENSMUSG00000041444.15	Arhgap32	chr9	protein_coding	Rho GTPase activating protein 32
chr9	32135948	32150558	+	32119561	32150558	A5SS	0.33	50	50	ENSMUST00000174641.8	ENSMUSG00000041444.15	Arhgap32	chr9	protein_coding	Rho GTPase activating protein 32
chr9	32135948	32150558	+	32135883	32150558	A5SS	0.33	50	50	ENSMUST00000168954.9	ENSMUSG00000041444.15	Arhgap32	chr9	protein_coding	Rho GTPase activating protein 32
chr9	32229198	32253518	-	32229198;32234315	32233377;32253518	ES	0.5	50	50	ENSMUST00000034533.7	ENSMUSG00000032034.7	Kcnj5	chr9	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 5
chr9	32234315	32255400	-	32234315;32253820	32253518;32255400	ES	0.5	50	50	ENSMUST00000034533.7	ENSMUSG00000032034.7	Kcnj5	chr9	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 5
chr9	32234315	32253518	-	32229198	32253518	A3SS	0.5	50	50	ENSMUST00000216033.2	ENSMUSG00000032034.7	Kcnj5	chr9	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 5
chr9	32234315	32255400	-	32253820	32255400	A3SS&ES	0.5	50	50	ENSMUST00000216033.2	ENSMUSG00000032034.7	Kcnj5	chr9	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 5
chr9	32229198	32233377	-	32229198	32253518	A5SS	0.5	50	50	ENSMUST00000216033.2	ENSMUSG00000032034.7	Kcnj5	chr9	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 5
chr9	32229198;32253820	32253518;32255400	-	32229198;32234315	32233377;32255400	MXE	0.5	100	100	ENSMUST00000214223.2	ENSMUSG00000032034.7	Kcnj5	chr9	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 5
chr9	32262592	32272553	+	32260274	32272553	A5SS	0.5	50	50	ENSMUST00000214720.2	ENSMUSG00000111056.2	Gm39317	chr9	lncRNA	predicted gene, 39317
chr9	32296641	32307617	+	32283909	32307617	A5SS	0.33	50	50	ENSMUST00000047334.10	ENSMUSG00000041248.10	Kcnj1	chr9	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 1
chr9	32305478	32307617	+	32283909	32307617	A5SS	0.33	50	50	ENSMUST00000047334.10	ENSMUSG00000041248.10	Kcnj1	chr9	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 1
chr9	32305478	32307617	+	32296641	32307617	A5SS	0.33	50	50	ENSMUST00000213393.2	ENSMUSG00000041248.10	Kcnj1	chr9	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 1
chr9	32388069	32453990	-	32388069	32452487	5pMXE	0.5	50	50	ENSMUST00000016231.14	ENSMUSG00000016087.14	Fli1	chr9	protein_coding	Friend leukemia integration 1
chr9	32607761	32639971	+	32576015	32639971	A5SS	0.5	50	50	ENSMUST00000183879.2	ENSMUSG00000032035.17	Ets1	chr9	protein_coding	E26 avian leukemia oncogene 1, 5' domain
chr9	32645484	32664095	+	32645484;32649655	32649395;32664095	ES	0.5	50	50	ENSMUST00000238819.2	ENSMUSG00000032035.17	Ets1	chr9	protein_coding	E26 avian leukemia oncogene 1, 5' domain
chr9	32607761	32649395	+	32645484	32649395	A5SS&ES	0.5	50	50	ENSMUST00000238819.2	ENSMUSG00000032035.17	Ets1	chr9	protein_coding	E26 avian leukemia oncogene 1, 5' domain
chr9	32649445	32665509	+	32664213	32665509	A5SS&ES	0.5	50	50	ENSMUST00000238819.2	ENSMUSG00000032035.17	Ets1	chr9	protein_coding	E26 avian leukemia oncogene 1, 5' domain
chr9	32607761;32649445	32649395;32665509	+	32607761;32664213	32639971;32665509	MXE	0.5	100	100	ENSMUST00000050797.14	ENSMUSG00000032035.17	Ets1	chr9	protein_coding	E26 avian leukemia oncogene 1, 5' domain
chr9	32607761;32649655	32649395;32664095	+	32607761;32645484	32639971;32664095	MXE	0.5	100	100	ENSMUST00000050797.14	ENSMUSG00000032035.17	Ets1	chr9	protein_coding	E26 avian leukemia oncogene 1, 5' domain
chr9	32645484;32649445	32649395;32665509	+	32645484;32664213	32664095;32665509	MXE	0.5	100	100	ENSMUST00000050797.14	ENSMUSG00000032035.17	Ets1	chr9	protein_coding	E26 avian leukemia oncogene 1, 5' domain
chr9	32607761	32639971	+	32607761	32649395	A3SS	0.5	50	50	ENSMUST00000184364.2	ENSMUSG00000032035.17	Ets1	chr9	protein_coding	E26 avian leukemia oncogene 1, 5' domain
chr9	32645484	32664095	+	32649655	32664095	A5SS&ES	0.5	50	50	ENSMUST00000184364.2	ENSMUSG00000032035.17	Ets1	chr9	protein_coding	E26 avian leukemia oncogene 1, 5' domain
chr9	34397571	34400000	+	34397480	34400000	A5SS	0.5	50	50	ENSMUST00000184203.8	ENSMUSG00000032036.16	Kirrel3	chr9	protein_coding	kirre like nephrin family adhesion molecule 3
chr9	34400454	34850408	+	34400454;34823157	34823080;34850408	ES	0.5	50	50	ENSMUST00000115148.9	ENSMUSG00000032036.16	Kirrel3	chr9	protein_coding	kirre like nephrin family adhesion molecule 3
chr9	34400454;34816321	34816221;34823080	+	34400454	34823080	cassetteExon	0.5	100	100	ENSMUST00000115148.9	ENSMUSG00000032036.16	Kirrel3	chr9	protein_coding	kirre like nephrin family adhesion molecule 3
chr9	34934948;34936442	34936407;34939628	+	34934948	34939628	cassetteExon	0.5	100	100	ENSMUST00000115148.9	ENSMUSG00000032036.16	Kirrel3	chr9	protein_coding	kirre like nephrin family adhesion molecule 3
chr9	34400454	34406315	+	34400454	34823080	A3SS	0.25	50	50	ENSMUST00000115148.9	ENSMUSG00000032036.16	Kirrel3	chr9	protein_coding	kirre like nephrin family adhesion molecule 3
chr9	34939810	34941070	+	34939735	34941070	A5SS	0.5	50	50	ENSMUST00000115148.9	ENSMUSG00000032036.16	Kirrel3	chr9	protein_coding	kirre like nephrin family adhesion molecule 3
chr9	34400454	34406315	+	34400454	34816221	A3SS	0.25	50	50	ENSMUST00000045091.13	ENSMUSG00000032036.16	Kirrel3	chr9	protein_coding	kirre like nephrin family adhesion molecule 3
chr9	34400454	34406315	+	34400454	34850408	A3SS	0.25	50	50	ENSMUST00000187182.7	ENSMUSG00000032036.16	Kirrel3	chr9	protein_coding	kirre like nephrin family adhesion molecule 3
chr9	34400454	34816221	+	34400454	34850408	A3SS	0.25	50	50	ENSMUST00000187182.7	ENSMUSG00000032036.16	Kirrel3	chr9	protein_coding	kirre like nephrin family adhesion molecule 3
chr9	34966945	35030299	-	34966945	35027994	5pMXE	0.16	50	50	ENSMUST00000034537.8	ENSMUSG00000032038.8	St3gal4	chr9	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 4
chr9	34966578	35010195	-	34966578	34966870	A5SS&ES	0.5	50	50	ENSMUST00000034537.8	ENSMUSG00000032038.8	St3gal4	chr9	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 4
chr9	34966945	34983867	-	34966945	35027994	A5SS	0.16	50	50	ENSMUST00000034537.8	ENSMUSG00000032038.8	St3gal4	chr9	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 4
chr9	34966945	34987613	-	34966945	35027994	A5SS	0.16	50	50	ENSMUST00000034537.8	ENSMUSG00000032038.8	St3gal4	chr9	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 4
chr9	34966945	35010195	-	34966945	35027994	A5SS	0.16	50	50	ENSMUST00000034537.8	ENSMUSG00000032038.8	St3gal4	chr9	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 4
chr9	34966945	35017871	-	34966945	35027994	A5SS	0.16	50	50	ENSMUST00000034537.8	ENSMUSG00000032038.8	St3gal4	chr9	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 4
chr9	34966945	34983867	-	34966945	35030299	A5SS	0.16	50	50	ENSMUST00000213526.2	ENSMUSG00000032038.8	St3gal4	chr9	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 4
chr9	34966945	34987613	-	34966945	35030299	A5SS	0.16	50	50	ENSMUST00000213526.2	ENSMUSG00000032038.8	St3gal4	chr9	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 4
chr9	34966945	35010195	-	34966945	35030299	A5SS	0.16	50	50	ENSMUST00000213526.2	ENSMUSG00000032038.8	St3gal4	chr9	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 4
chr9	34966945	35017871	-	34966945	35030299	A5SS	0.16	50	50	ENSMUST00000213526.2	ENSMUSG00000032038.8	St3gal4	chr9	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 4
chr9	34966945	34983867	-	34966945	35017871	A5SS	0.16	50	50	ENSMUST00000216557.2	ENSMUSG00000032038.8	St3gal4	chr9	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 4
chr9	34966945	34987613	-	34966945	35017871	A5SS	0.16	50	50	ENSMUST00000216557.2	ENSMUSG00000032038.8	St3gal4	chr9	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 4
chr9	34966945	35010195	-	34966945	35017871	A5SS	0.16	50	50	ENSMUST00000216557.2	ENSMUSG00000032038.8	St3gal4	chr9	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 4
chr9	34966578	35010195	-	34966578;34966945	34966870;35010195	ES	0.5	50	50	ENSMUST00000214526.2	ENSMUSG00000032038.8	St3gal4	chr9	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 4
chr9	34966945	34983867	-	34966945	35010195	A5SS	0.16	50	50	ENSMUST00000214526.2	ENSMUSG00000032038.8	St3gal4	chr9	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 4
chr9	34966945	34987613	-	34966945	35010195	A5SS	0.16	50	50	ENSMUST00000214526.2	ENSMUSG00000032038.8	St3gal4	chr9	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 4
chr9	34966945	34987613	-	34966945	34983867	5pMXE	0.16	50	50	ENSMUST00000217542.2	ENSMUSG00000032038.8	St3gal4	chr9	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 4
chr9	35029642	35037512	+	35029642	35034897	A3SS&ES	0.5	50	50	ENSMUST00000093873.9	ENSMUSG00000070315.13	4930581F22Rik	chr9	lncRNA	RIKEN cDNA 4930581F22 gene
chr9	35034990	35037508	+	35034990	35040075	A3SS	0.5	50	50	ENSMUST00000093873.9	ENSMUSG00000070315.13	4930581F22Rik	chr9	lncRNA	RIKEN cDNA 4930581F22 gene
chr9	35036140;35036639	35036463;35037603	-	35036140	35037603	cassetteExon	0.5	100	100	ENSMUST00000034539.12	ENSMUSG00000032040.16	Dcps	chr9	protein_coding	decapping enzyme, scavenger
chr9	35102992	35110507	-	35102992	35110517	A5SS	0.33	50	50	ENSMUST00000175765.8	ENSMUSG00000032041.16	Tirap	chr9	protein_coding	toll-interleukin 1 receptor (TIR) domain-containing adaptor protein
chr9	35102992	35111153	-	35102992	35110517	A5SS&ES	0.33	50	50	ENSMUST00000175765.8	ENSMUSG00000032041.16	Tirap	chr9	protein_coding	toll-interleukin 1 receptor (TIR) domain-containing adaptor protein
chr9	35110615	35111153	-	35110615	35111461	A5SS	0.33	50	50	ENSMUST00000175765.8	ENSMUSG00000032041.16	Tirap	chr9	protein_coding	toll-interleukin 1 receptor (TIR) domain-containing adaptor protein
chr9	35110615	35111157	-	35110615	35111461	A5SS	0.33	50	50	ENSMUST00000175765.8	ENSMUSG00000032041.16	Tirap	chr9	protein_coding	toll-interleukin 1 receptor (TIR) domain-containing adaptor protein
chr9	35102992	35111153	-	35102992;35110615	35110507;35111153	ES	0.5	50	50	ENSMUST00000176531.8	ENSMUSG00000032041.16	Tirap	chr9	protein_coding	toll-interleukin 1 receptor (TIR) domain-containing adaptor protein
chr9	35110615	35111157	-	35110615	35111153	A5SS	0.33	50	50	ENSMUST00000176531.8	ENSMUSG00000032041.16	Tirap	chr9	protein_coding	toll-interleukin 1 receptor (TIR) domain-containing adaptor protein
chr9	35102992	35111153	-	35102992	35110507	A5SS&ES	0.33	50	50	ENSMUST00000177129.8	ENSMUSG00000032041.16	Tirap	chr9	protein_coding	toll-interleukin 1 receptor (TIR) domain-containing adaptor protein
chr9	35102992	35111153	-	35102992;35110615	35110517;35111153	ES	0.5	50	50	ENSMUST00000176685.8	ENSMUSG00000032041.16	Tirap	chr9	protein_coding	toll-interleukin 1 receptor (TIR) domain-containing adaptor protein
chr9	35122701	35123288	+	35111509	35123288	A5SS	0.5	50	50	ENSMUST00000138287.8	ENSMUSG00000032042.12	Srpr	chr9	protein_coding	signal recognition particle receptor ('docking protein')
chr9	35127109	35159036	+	35127109	35127234	3pMXE	0.5	50	50	ENSMUST00000034541.12	ENSMUSG00000032042.12	Srpr	chr9	protein_coding	signal recognition particle receptor ('docking protein')
chr9	35118876	35120334	-	35118876;35119282	35119188;35120334	ES	0.25	50	50	ENSMUST00000154691.8	ENSMUSG00000039048.16	Foxred1	chr9	protein_coding	FAD-dependent oxidoreductase domain containing 1
chr9	35116437	35116601	-	35116419	35116601	A3SS	0.5	50	50	ENSMUST00000154691.8	ENSMUSG00000039048.16	Foxred1	chr9	protein_coding	FAD-dependent oxidoreductase domain containing 1
chr9	35119278	35120334	-	35119282	35120334	A3SS	0.25	50	50	ENSMUST00000154691.8	ENSMUSG00000039048.16	Foxred1	chr9	protein_coding	FAD-dependent oxidoreductase domain containing 1
chr9	35120825	35121241	-	35120803	35121241	A3SS	0.5	50	50	ENSMUST00000154691.8	ENSMUSG00000039048.16	Foxred1	chr9	protein_coding	FAD-dependent oxidoreductase domain containing 1
chr9	35121461	35122103	-	35121461	35122041	A5SS	0.5	50	50	ENSMUST00000154691.8	ENSMUSG00000039048.16	Foxred1	chr9	protein_coding	FAD-dependent oxidoreductase domain containing 1
chr9	35117595	35120334	-	35117595;35118876	35118775;35120334	ES	0.25	50	50	ENSMUST00000130072.8	ENSMUSG00000039048.16	Foxred1	chr9	protein_coding	FAD-dependent oxidoreductase domain containing 1
chr9	35118876;35119278	35119188;35120334	-	35118876	35120334	cassetteExon	0.5	100	100	ENSMUST00000130072.8	ENSMUSG00000039048.16	Foxred1	chr9	protein_coding	FAD-dependent oxidoreductase domain containing 1
chr9	35120825	35121236	-	35120825	35121241	A5SS	0.5	50	50	ENSMUST00000043805.15	ENSMUSG00000039048.16	Foxred1	chr9	protein_coding	FAD-dependent oxidoreductase domain containing 1
chr9	35119278	35120334	-	35117595	35120334	A3SS	0.25	50	50	ENSMUST00000142595.8	ENSMUSG00000039048.16	Foxred1	chr9	protein_coding	FAD-dependent oxidoreductase domain containing 1
chr9	35119282	35120334	-	35117595	35120334	A3SS	0.25	50	50	ENSMUST00000142595.8	ENSMUSG00000039048.16	Foxred1	chr9	protein_coding	FAD-dependent oxidoreductase domain containing 1
chr9	35129284	35134910	-	35129284;35132961	35132676;35134910	ES	0.33	50	50	ENSMUST00000063782.12	ENSMUSG00000050471.18	Fam118b	chr9	protein_coding	family with sequence similarity 118, member B
chr9	35146779	35179019	-	35146779;35156002	35155910;35179019	ES	0.2	50	50	ENSMUST00000063782.12	ENSMUSG00000050471.18	Fam118b	chr9	protein_coding	family with sequence similarity 118, member B
chr9	35135038;35138687	35138460;35146527	-	35135038	35146527	cassetteExon	0.5	100	100	ENSMUST00000063782.12	ENSMUSG00000050471.18	Fam118b	chr9	protein_coding	family with sequence similarity 118, member B
chr9	35146779;35149159	35149019;35155910	-	35146779	35155910	cassetteExon	0.5	100	100	ENSMUST00000063782.12	ENSMUSG00000050471.18	Fam118b	chr9	protein_coding	family with sequence similarity 118, member B
chr9	35156002;35160026	35159965;35179019	-	35156002	35179019	cassetteExon	0.5	100	100	ENSMUST00000063782.12	ENSMUSG00000050471.18	Fam118b	chr9	protein_coding	family with sequence similarity 118, member B
chr9	35132900	35134910	-	35132961	35134910	A3SS	0.33	50	50	ENSMUST00000063782.12	ENSMUSG00000050471.18	Fam118b	chr9	protein_coding	family with sequence similarity 118, member B
chr9	35178405	35179019	-	35156002	35179019	A3SS	0.2	50	50	ENSMUST00000063782.12	ENSMUSG00000050471.18	Fam118b	chr9	protein_coding	family with sequence similarity 118, member B
chr9	35178407	35179019	-	35156002	35179019	A3SS	0.2	50	50	ENSMUST00000063782.12	ENSMUSG00000050471.18	Fam118b	chr9	protein_coding	family with sequence similarity 118, member B
chr9	35156002	35156437	-	35156002	35179019	A5SS	0.33	50	50	ENSMUST00000063782.12	ENSMUSG00000050471.18	Fam118b	chr9	protein_coding	family with sequence similarity 118, member B
chr9	35156002;35160026	35159965;35179019	-	35156002;35178407	35156437;35179019	MXE	0.5	100	100	ENSMUST00000121564.8	ENSMUSG00000050471.18	Fam118b	chr9	protein_coding	family with sequence similarity 118, member B
chr9	35178405	35179019	-	35178407	35179019	A3SS	0.2	50	50	ENSMUST00000121564.8	ENSMUSG00000050471.18	Fam118b	chr9	protein_coding	family with sequence similarity 118, member B
chr9	35129284;35132900	35132676;35134910	-	35129284	35134910	cassetteExon	0.5	100	100	ENSMUST00000133739.8	ENSMUSG00000050471.18	Fam118b	chr9	protein_coding	family with sequence similarity 118, member B
chr9	35129284	35134910	-	35132900	35134910	3pMXE	0.33	50	50	ENSMUST00000217306.2	ENSMUSG00000050471.18	Fam118b	chr9	protein_coding	family with sequence similarity 118, member B
chr9	35160026	35179019	-	35146779	35179019	A3SS	0.2	50	50	ENSMUST00000217306.2	ENSMUSG00000050471.18	Fam118b	chr9	protein_coding	family with sequence similarity 118, member B
chr9	35178405	35179019	-	35146779	35179019	A3SS	0.2	50	50	ENSMUST00000217306.2	ENSMUSG00000050471.18	Fam118b	chr9	protein_coding	family with sequence similarity 118, member B
chr9	35178407	35179019	-	35146779	35179019	A3SS	0.2	50	50	ENSMUST00000217306.2	ENSMUSG00000050471.18	Fam118b	chr9	protein_coding	family with sequence similarity 118, member B
chr9	35146779	35149019	-	35146779	35179019	A5SS	0.33	50	50	ENSMUST00000217306.2	ENSMUSG00000050471.18	Fam118b	chr9	protein_coding	family with sequence similarity 118, member B
chr9	35129284	35134910	-	35132961	35134910	3pMXE	0.33	50	50	ENSMUST00000125087.2	ENSMUSG00000050471.18	Fam118b	chr9	protein_coding	family with sequence similarity 118, member B
chr9	35178405	35179019	-	35160026	35179019	A3SS	0.2	50	50	ENSMUST00000125087.2	ENSMUSG00000050471.18	Fam118b	chr9	protein_coding	family with sequence similarity 118, member B
chr9	35178407	35179019	-	35160026	35179019	A3SS	0.2	50	50	ENSMUST00000125087.2	ENSMUSG00000050471.18	Fam118b	chr9	protein_coding	family with sequence similarity 118, member B
chr9	35156002	35156437	-	35156002	35159965	A5SS	0.33	50	50	ENSMUST00000125087.2	ENSMUSG00000050471.18	Fam118b	chr9	protein_coding	family with sequence similarity 118, member B
chr9	35363473	35364169	+	35363473	35363957	A3SS	0.5	50	50	ENSMUST00000151682.8	ENSMUSG00000038119.16	Cdon	chr9	protein_coding	cell adhesion molecule-related/down-regulated by oncogenes
chr9	35332898	35363341	+	35332479	35363341	A5SS	0.25	50	50	ENSMUST00000151682.8	ENSMUSG00000038119.16	Cdon	chr9	protein_coding	cell adhesion molecule-related/down-regulated by oncogenes
chr9	35333111	35363341	+	35332479	35363341	A5SS	0.25	50	50	ENSMUST00000151682.8	ENSMUSG00000038119.16	Cdon	chr9	protein_coding	cell adhesion molecule-related/down-regulated by oncogenes
chr9	35342156	35363341	+	35332479	35363341	A5SS	0.25	50	50	ENSMUST00000151682.8	ENSMUSG00000038119.16	Cdon	chr9	protein_coding	cell adhesion molecule-related/down-regulated by oncogenes
chr9	35333111	35363341	+	35332898	35363341	A5SS	0.25	50	50	ENSMUST00000137200.9	ENSMUSG00000038119.16	Cdon	chr9	protein_coding	cell adhesion molecule-related/down-regulated by oncogenes
chr9	35342156	35363341	+	35332898	35363341	A5SS	0.25	50	50	ENSMUST00000137200.9	ENSMUSG00000038119.16	Cdon	chr9	protein_coding	cell adhesion molecule-related/down-regulated by oncogenes
chr9	35342156	35363341	+	35333111	35363341	A5SS	0.25	50	50	ENSMUST00000119129.10	ENSMUSG00000038119.16	Cdon	chr9	protein_coding	cell adhesion molecule-related/down-regulated by oncogenes
chr9	35523167	35557443	+	35523167	35580719	A3SS	0.5	50	50	ENSMUST00000098906.9	ENSMUSG00000074452.14	Pate2	chr9	protein_coding	prostate and testis expressed 2
chr9	35581198	35581778	+	35581198	35581775	A3SS	0.5	50	50	ENSMUST00000098906.9	ENSMUSG00000074452.14	Pate2	chr9	protein_coding	prostate and testis expressed 2
chr9	35485300	35485526	+	35481826	35485526	A5SS	0.5	50	50	ENSMUST00000098906.9	ENSMUSG00000074452.14	Pate2	chr9	protein_coding	prostate and testis expressed 2
chr9	35700408	35700910	-	35689405	35700910	A3SS	0.5	50	50	ENSMUST00000184431.2	ENSMUSG00000098847.2	Gm27235	chr9	protein_coding	predicted gene 27235
chr9	35759974	35760122	-	35759795	35760122	A3SS	0.5	50	50	ENSMUST00000214488.2	ENSMUSG00000098705.9	Gm3428	chr9	lncRNA	predicted gene 3428
chr9	35760745	35761105	-	35760629	35761105	A3SS	0.5	50	50	ENSMUST00000214488.2	ENSMUSG00000098705.9	Gm3428	chr9	lncRNA	predicted gene 3428
chr9	35819789	35819901	+	35819785	35819901	A5SS	0.5	50	50	ENSMUST00000176049.2	ENSMUSG00000078934.5	Pate13	chr9	protein_coding	prostate and testis expressed 13
chr9	35872209	35873830	-	35872209;35873395	35873238;35873830	ES	0.5	50	50	ENSMUST00000184065.9	ENSMUSG00000099201.9	Gm27187	chr9	lncRNA	predicted gene 27187
chr9	36046327	36046803	-	36046443	36046803	A3SS	0.5	50	50	ENSMUST00000184421.8	ENSMUSG00000098390.8	Gm3434	chr9	lncRNA	predicted gene 3434
chr9	36600822;36602462	36602425;36604162	-	36600822	36604162	cassetteExon	0.5	100	100	ENSMUST00000216487.2	ENSMUSG00000111683.2	Gm49367	chr9	lncRNA	predicted gene, 49367
chr9	36580367	36600705	-	36549197	36600705	A3SS	0.5	50	50	ENSMUST00000216487.2	ENSMUSG00000111683.2	Gm49367	chr9	lncRNA	predicted gene, 49367
chr9	36547280	36548583	-	36547280	36548500	A5SS	0.5	50	50	ENSMUST00000216487.2	ENSMUSG00000111683.2	Gm49367	chr9	lncRNA	predicted gene, 49367
chr9	36549197	36549782	-	36549197	36600705	A5SS	0.33	50	50	ENSMUST00000216487.2	ENSMUSG00000111683.2	Gm49367	chr9	lncRNA	predicted gene, 49367
chr9	36549197	36554467	-	36549197	36600705	A5SS	0.33	50	50	ENSMUST00000216487.2	ENSMUSG00000111683.2	Gm49367	chr9	lncRNA	predicted gene, 49367
chr9	36549197	36554467	-	36549197	36549782	5pMXE	0.33	50	50	ENSMUST00000093868.9	ENSMUSG00000070313.9	Pate14	chr9	protein_coding	prostate and testis expressed 14
chr9	36621726	36624617	-	36621726;36623439	36623338;36624617	ES	0.5	50	50	ENSMUST00000172702.9	ENSMUSG00000032113.17	Chek1	chr9	protein_coding	checkpoint kinase 1
chr9	36634121	36637093	-	36634121;36635316	36635093;36637093	ES	0.5	50	50	ENSMUST00000172702.9	ENSMUSG00000032113.17	Chek1	chr9	protein_coding	checkpoint kinase 1
chr9	36635316	36637859	-	36635316	36637093	5pMXE	0.5	50	50	ENSMUST00000172702.9	ENSMUSG00000032113.17	Chek1	chr9	protein_coding	checkpoint kinase 1
chr9	36635316	36637859	-	36635316;36637174	36637093;36637859	ES	0.5	50	50	ENSMUST00000034625.12	ENSMUSG00000032113.17	Chek1	chr9	protein_coding	checkpoint kinase 1
chr9	36637174	36637679	-	36637174	36637859	A5SS	0.5	50	50	ENSMUST00000034625.12	ENSMUSG00000032113.17	Chek1	chr9	protein_coding	checkpoint kinase 1
chr9	36634121;36635316	36635093;36637859	-	36634121;36637174	36637093;36637859	MXE	0.5	100	100	ENSMUST00000174105.8	ENSMUSG00000032113.17	Chek1	chr9	protein_coding	checkpoint kinase 1
chr9	36634121	36637093	-	36635316	36637093	3pMXE	0.5	50	50	ENSMUST00000173977.2	ENSMUSG00000032113.17	Chek1	chr9	protein_coding	checkpoint kinase 1
chr9	36670163	36674633	-	36670163;36670620	36670499;36674633	ES	0.33	50	50	ENSMUST00000120381.9	ENSMUSG00000032116.19	Stt3a	chr9	protein_coding	STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)
chr9	36674693	36678846	-	36674693;36676476	36676350;36678846	ES	0.5	50	50	ENSMUST00000120381.9	ENSMUSG00000032116.19	Stt3a	chr9	protein_coding	STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)
chr9	36644068	36662478	-	36661029	36662478	A3SS&ES	0.5	50	50	ENSMUST00000120381.9	ENSMUSG00000032116.19	Stt3a	chr9	protein_coding	STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)
chr9	36676476	36678359	-	36676476	36678846	A5SS	0.5	50	50	ENSMUST00000120381.9	ENSMUSG00000032116.19	Stt3a	chr9	protein_coding	STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)
chr9	36666192	36674633	-	36666192;36670163	36670018;36674633	ES	0.33	50	50	ENSMUST00000128270.8	ENSMUSG00000032116.19	Stt3a	chr9	protein_coding	STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)
chr9	36670620	36674633	-	36666192	36674633	A3SS	0.33	50	50	ENSMUST00000217599.2	ENSMUSG00000032116.19	Stt3a	chr9	protein_coding	STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)
chr9	36670163	36674633	-	36670163	36670499	5pMXE	0.5	50	50	ENSMUST00000143881.2	ENSMUSG00000032116.19	Stt3a	chr9	protein_coding	STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)
chr9	36670163	36674633	-	36670620	36674633	3pMXE	0.33	50	50	ENSMUST00000133060.3	ENSMUSG00000032116.19	Stt3a	chr9	protein_coding	STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)
chr9	36674693	36678846	-	36676476	36678846	A3SS	0.5	50	50	ENSMUST00000137994.3	ENSMUSG00000032116.19	Stt3a	chr9	protein_coding	STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)
chr9	36699549	36704536	-	36699549;36701221	36701076;36704536	ES	0.5	50	50	ENSMUST00000239021.2	ENSMUSG00000062762.18	Ei24	chr9	protein_coding	etoposide induced 2.4 mRNA
chr9	36704645	36708509	-	36704645	36708300	5pMXE	0.33	50	50	ENSMUST00000239021.2	ENSMUSG00000062762.18	Ei24	chr9	protein_coding	etoposide induced 2.4 mRNA
chr9	36701221	36701494	-	36701221	36704536	A5SS	0.5	50	50	ENSMUST00000239021.2	ENSMUSG00000062762.18	Ei24	chr9	protein_coding	etoposide induced 2.4 mRNA
chr9	36704645	36708255	-	36704645	36708300	A5SS	0.33	50	50	ENSMUST00000239021.2	ENSMUSG00000062762.18	Ei24	chr9	protein_coding	etoposide induced 2.4 mRNA
chr9	36704645	36708255	-	36704645	36708509	A5SS	0.33	50	50	ENSMUST00000238932.2	ENSMUSG00000062762.18	Ei24	chr9	protein_coding	etoposide induced 2.4 mRNA
chr9	36755313;36758157	36758084;36761643	+	36755313	36761643	cassetteExon	0.5	100	100	ENSMUST00000162633.9	ENSMUSG00000032118.17	Fez1	chr9	protein_coding	fasciculation and elongation protein zeta 1 (zygin I)
chr9	36744207	36754958	+	36733671	36754958	A5SS	0.33	50	50	ENSMUST00000162633.9	ENSMUSG00000032118.17	Fez1	chr9	protein_coding	fasciculation and elongation protein zeta 1 (zygin I)
chr9	36745132	36754958	+	36733671	36754958	A5SS	0.33	50	50	ENSMUST00000162633.9	ENSMUSG00000032118.17	Fez1	chr9	protein_coding	fasciculation and elongation protein zeta 1 (zygin I)
chr9	36744207	36754966	+	36744207	36754958	A3SS	0.5	50	50	ENSMUST00000034630.15	ENSMUSG00000032118.17	Fez1	chr9	protein_coding	fasciculation and elongation protein zeta 1 (zygin I)
chr9	36781852	36781965	+	36781852	36787593	A3SS	0.5	50	50	ENSMUST00000034630.15	ENSMUSG00000032118.17	Fez1	chr9	protein_coding	fasciculation and elongation protein zeta 1 (zygin I)
chr9	36787658	36788818	+	36787658	36789862	A3SS	0.5	50	50	ENSMUST00000034630.15	ENSMUSG00000032118.17	Fez1	chr9	protein_coding	fasciculation and elongation protein zeta 1 (zygin I)
chr9	36745132	36754958	+	36744207	36754958	A5SS	0.33	50	50	ENSMUST00000034630.15	ENSMUSG00000032118.17	Fez1	chr9	protein_coding	fasciculation and elongation protein zeta 1 (zygin I)
chr9	36847788	36879674	-	36847788;36866128	36865989;36879674	ES	0.33	50	50	ENSMUST00000177218.8	ENSMUSG00000035934.17	Pknox2	chr9	protein_coding	Pbx/knotted 1 homeobox 2
chr9	36866128;36868419	36868303;36879674	-	36866128	36879674	cassetteExon	0.5	100	100	ENSMUST00000177218.8	ENSMUSG00000035934.17	Pknox2	chr9	protein_coding	Pbx/knotted 1 homeobox 2
chr9	36866128;36898568	36898464;36994503	-	36866128;36879782	36879674;36994503	MXE	0.5	100	100	ENSMUST00000177218.8	ENSMUSG00000035934.17	Pknox2	chr9	protein_coding	Pbx/knotted 1 homeobox 2
chr9	36879782;36898568	36898464;36994503	-	36879782	36994503	cassetteExon	0.5	100	100	ENSMUST00000177218.8	ENSMUSG00000035934.17	Pknox2	chr9	protein_coding	Pbx/knotted 1 homeobox 2
chr9	36866128	36898464	-	36866128;36879782	36879674;36898464	ES	0.5	50	50	ENSMUST00000039674.13	ENSMUSG00000035934.17	Pknox2	chr9	protein_coding	Pbx/knotted 1 homeobox 2
chr9	36994572;37048860	37048642;37058537	-	36994572	37058537	cassetteExon	0.5	100	100	ENSMUST00000039674.13	ENSMUSG00000035934.17	Pknox2	chr9	protein_coding	Pbx/knotted 1 homeobox 2
chr9	36994572;37048860	37048646;37058537	-	36994572	37058537	cassetteExon	0.5	100	100	ENSMUST00000039674.13	ENSMUSG00000035934.17	Pknox2	chr9	protein_coding	Pbx/knotted 1 homeobox 2
chr9	36994572	37056846	-	36994572	37058537	A5SS	0.25	50	50	ENSMUST00000039674.13	ENSMUSG00000035934.17	Pknox2	chr9	protein_coding	Pbx/knotted 1 homeobox 2
chr9	36879782	36994503	-	36879782	36898464	5pMXE	0.5	50	50	ENSMUST00000175938.9	ENSMUSG00000035934.17	Pknox2	chr9	protein_coding	Pbx/knotted 1 homeobox 2
chr9	36847788;36866128	36865989;36898464	-	36847788;36879782	36879674;36898464	MXE	0.5	100	100	ENSMUST00000175938.9	ENSMUSG00000035934.17	Pknox2	chr9	protein_coding	Pbx/knotted 1 homeobox 2
chr9	36868419	36879674	-	36847788	36879674	A3SS	0.33	50	50	ENSMUST00000175938.9	ENSMUSG00000035934.17	Pknox2	chr9	protein_coding	Pbx/knotted 1 homeobox 2
chr9	36847788;36879782	36879674;36994503	-	36847788;36898568	36865989;36994503	MXE	0.5	100	100	ENSMUST00000177080.8	ENSMUSG00000035934.17	Pknox2	chr9	protein_coding	Pbx/knotted 1 homeobox 2
chr9	36866128	36868303	-	36866128	36898464	A5SS	0.33	50	50	ENSMUST00000177080.8	ENSMUSG00000035934.17	Pknox2	chr9	protein_coding	Pbx/knotted 1 homeobox 2
chr9	36994572	37056846	-	36994572	37048642	5pMXE	0.25	50	50	ENSMUST00000188348.7	ENSMUSG00000035934.17	Pknox2	chr9	protein_coding	Pbx/knotted 1 homeobox 2
chr9	36994572	37058537	-	36994572	37048642	5pMXE	0.25	50	50	ENSMUST00000188348.7	ENSMUSG00000035934.17	Pknox2	chr9	protein_coding	Pbx/knotted 1 homeobox 2
chr9	36994572	37048646	-	36994572	37048642	A5SS	0.25	50	50	ENSMUST00000188348.7	ENSMUSG00000035934.17	Pknox2	chr9	protein_coding	Pbx/knotted 1 homeobox 2
chr9	36847788	36879674	-	36866128	36879674	3pMXE	0.33	50	50	ENSMUST00000189294.7	ENSMUSG00000035934.17	Pknox2	chr9	protein_coding	Pbx/knotted 1 homeobox 2
chr9	36994572	37048646	-	36994572	37056846	A5SS	0.25	50	50	ENSMUST00000189294.7	ENSMUSG00000035934.17	Pknox2	chr9	protein_coding	Pbx/knotted 1 homeobox 2
chr9	36879782	36994503	-	36898568	36994503	3pMXE	0.5	50	50	ENSMUST00000188433.2	ENSMUSG00000035934.17	Pknox2	chr9	protein_coding	Pbx/knotted 1 homeobox 2
chr9	37142952;37144405	37144349;37144606	-	37142952	37144606	cassetteExon	0.5	100	100	ENSMUST00000115068.10	ENSMUSG00000032122.16	Slc37a2	chr9	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 2
chr9	37253917	37259034	-	37253917;37255329	37255180;37259034	ES	0.5	50	50	ENSMUST00000239439.2	ENSMUSG00000034303.9	Ccdc15	chr9	protein_coding	coiled-coil domain containing 15
chr9	37231806	37253722	-	37231806	37253732	A5SS	0.5	50	50	ENSMUST00000239439.2	ENSMUSG00000034303.9	Ccdc15	chr9	protein_coding	coiled-coil domain containing 15
chr9	37259219	37259564	-	37259219	37259330	A5SS	0.5	50	50	ENSMUST00000239439.2	ENSMUSG00000034303.9	Ccdc15	chr9	protein_coding	coiled-coil domain containing 15
chr9	37279057	37292003	+	37279057	37291759	A3SS	0.5	50	50	ENSMUST00000051839.9	ENSMUSG00000046240.9	Hepacam	chr9	protein_coding	hepatocyte cell adhesion molecule
chr9	37293119	37293652	+	37293119	37295150	A3SS	0.5	50	50	ENSMUST00000215951.2	ENSMUSG00000046240.9	Hepacam	chr9	protein_coding	hepatocyte cell adhesion molecule
chr9	37294750	37295150	+	37293119	37295150	A5SS	0.5	50	50	ENSMUST00000215951.2	ENSMUSG00000046240.9	Hepacam	chr9	protein_coding	hepatocyte cell adhesion molecule
chr9	37313447	37314448	+	37313447;37314183	37313851;37314448	ES	0.5	50	50	ENSMUST00000156972.3	ENSMUSG00000032125.22	Robo4	chr9	protein_coding	roundabout guidance receptor 4
chr9	37321785	37321996	+	37321785	37321975	A3SS	0.5	50	50	ENSMUST00000156972.3	ENSMUSG00000032125.22	Robo4	chr9	protein_coding	roundabout guidance receptor 4
chr9	37401129	37402680	+	37401129	37428513	A3SS	0.2	50	50	ENSMUST00000239459.2	ENSMUSG00000042138.10	Msantd2	chr9	protein_coding	Myb/SANT-like DNA-binding domain containing 2
chr9	37401129	37402752	+	37401129	37428513	A3SS	0.2	50	50	ENSMUST00000239459.2	ENSMUSG00000042138.10	Msantd2	chr9	protein_coding	Myb/SANT-like DNA-binding domain containing 2
chr9	37401129	37424910	+	37401129	37428513	A3SS	0.2	50	50	ENSMUST00000239459.2	ENSMUSG00000042138.10	Msantd2	chr9	protein_coding	Myb/SANT-like DNA-binding domain containing 2
chr9	37401129	37428669	+	37401129	37428513	A3SS	0.2	50	50	ENSMUST00000239459.2	ENSMUSG00000042138.10	Msantd2	chr9	protein_coding	Myb/SANT-like DNA-binding domain containing 2
chr9	37401129	37428669	+	37400682	37428669	A5SS	0.33	50	50	ENSMUST00000211060.2	ENSMUSG00000042138.10	Msantd2	chr9	protein_coding	Myb/SANT-like DNA-binding domain containing 2
chr9	37424999	37428669	+	37400682	37428669	A5SS	0.33	50	50	ENSMUST00000211060.2	ENSMUSG00000042138.10	Msantd2	chr9	protein_coding	Myb/SANT-like DNA-binding domain containing 2
chr9	37401129	37424910	+	37401129;37402865	37402752;37424910	ES	0.5	50	50	ENSMUST00000209391.2	ENSMUSG00000042138.10	Msantd2	chr9	protein_coding	Myb/SANT-like DNA-binding domain containing 2
chr9	37401129	37402680	+	37401129	37402752	A3SS	0.33	50	50	ENSMUST00000209391.2	ENSMUSG00000042138.10	Msantd2	chr9	protein_coding	Myb/SANT-like DNA-binding domain containing 2
chr9	37401129;37424999	37424910;37428669	+	37401129	37428669	cassetteExon	0.5	100	100	ENSMUST00000214298.2	ENSMUSG00000042138.10	Msantd2	chr9	protein_coding	Myb/SANT-like DNA-binding domain containing 2
chr9	37401129	37402680	+	37401129	37428669	A3SS	0.2	50	50	ENSMUST00000214298.2	ENSMUSG00000042138.10	Msantd2	chr9	protein_coding	Myb/SANT-like DNA-binding domain containing 2
chr9	37401129	37402752	+	37401129	37428669	A3SS	0.2	50	50	ENSMUST00000214298.2	ENSMUSG00000042138.10	Msantd2	chr9	protein_coding	Myb/SANT-like DNA-binding domain containing 2
chr9	37401129	37424910	+	37401129	37402680	3pMXE	0.2	50	50	ENSMUST00000211224.2	ENSMUSG00000042138.10	Msantd2	chr9	protein_coding	Myb/SANT-like DNA-binding domain containing 2
chr9	37401129;37402865	37402680;37424910	+	37401129	37424910	cassetteExon	0.5	100	100	ENSMUST00000211792.2	ENSMUSG00000042138.10	Msantd2	chr9	protein_coding	Myb/SANT-like DNA-binding domain containing 2
chr9	37448016	37448807	+	37448016	37448302	A3SS&ES	0.5	50	50	ENSMUST00000002011.14	ENSMUSG00000001946.15	Esam	chr9	protein_coding	endothelial cell-specific adhesion molecule
chr9	37440159	37442784	+	37439586	37442784	A5SS	0.25	50	50	ENSMUST00000002011.14	ENSMUSG00000001946.15	Esam	chr9	protein_coding	endothelial cell-specific adhesion molecule
chr9	37441806	37442784	+	37439586	37442784	A5SS	0.25	50	50	ENSMUST00000002011.14	ENSMUSG00000001946.15	Esam	chr9	protein_coding	endothelial cell-specific adhesion molecule
chr9	37442529	37442784	+	37439586	37442784	A5SS	0.25	50	50	ENSMUST00000002011.14	ENSMUSG00000001946.15	Esam	chr9	protein_coding	endothelial cell-specific adhesion molecule
chr9	37441806	37442784	+	37440159	37442784	A5SS	0.25	50	50	ENSMUST00000146860.8	ENSMUSG00000001946.15	Esam	chr9	protein_coding	endothelial cell-specific adhesion molecule
chr9	37442529	37442784	+	37440159	37442784	A5SS	0.25	50	50	ENSMUST00000146860.8	ENSMUSG00000001946.15	Esam	chr9	protein_coding	endothelial cell-specific adhesion molecule
chr9	37442529	37442784	+	37441806	37442784	A5SS	0.25	50	50	ENSMUST00000144596.2	ENSMUSG00000001946.15	Esam	chr9	protein_coding	endothelial cell-specific adhesion molecule
chr9	37450734	37451672	+	37450734	37451165	A3SS&ES	0.5	50	50	ENSMUST00000002008.7	ENSMUSG00000001943.9	Vsig2	chr9	protein_coding	V-set and immunoglobulin domain containing 2
chr9	37451797	37452623	+	37451797	37453885	A3SS	0.5	50	50	ENSMUST00000215957.2	ENSMUSG00000001943.9	Vsig2	chr9	protein_coding	V-set and immunoglobulin domain containing 2
chr9	37453770	37453885	+	37451797	37453885	A5SS	0.5	50	50	ENSMUST00000215957.2	ENSMUSG00000001943.9	Vsig2	chr9	protein_coding	V-set and immunoglobulin domain containing 2
chr9	37457013	37457384	-	37457013	37457244	A5SS	0.5	50	50	ENSMUST00000065668.12	ENSMUSG00000053310.12	Nrgn	chr9	protein_coding	neurogranin
chr9	37524907	37528096	+	37469518	37528096	A5SS	0.33	50	50	ENSMUST00000213126.2	ENSMUSG00000001942.9	Siae	chr9	protein_coding	sialic acid acetylesterase
chr9	37525222	37528096	+	37469518	37528096	A5SS	0.33	50	50	ENSMUST00000213126.2	ENSMUSG00000001942.9	Siae	chr9	protein_coding	sialic acid acetylesterase
chr9	37533160	37534195	+	37528257	37534195	A5SS	0.5	50	50	ENSMUST00000213126.2	ENSMUSG00000001942.9	Siae	chr9	protein_coding	sialic acid acetylesterase
chr9	37525222	37528096	+	37524907	37528096	A5SS	0.33	50	50	ENSMUST00000215829.2	ENSMUSG00000001942.9	Siae	chr9	protein_coding	sialic acid acetylesterase
chr9	37523314	37524556	-	37523314	37524852	A5SS	0.5	50	50	ENSMUST00000002013.11	ENSMUSG00000001948.11	Spa17	chr9	protein_coding	sperm autoantigenic protein 17
chr9	37578047;37578796	37578656;37580171	-	37578047	37580171	cassetteExon	0.5	100	100	ENSMUST00000011262.4	ENSMUSG00000011118.5	Panx3	chr9	protein_coding	pannexin 3
chr9	38202863	38203292	+	38202863	38203219	A3SS	0.5	50	50	ENSMUST00000216276.2	ENSMUSG00000111814.2	Olfr896-ps1	chr9	protein_coding	olfactory receptor 896, pseudogene 1
chr9	38202630	38202738	+	38202654	38202738	A5SS	0.5	50	50	ENSMUST00000216276.2	ENSMUSG00000111814.2	Olfr896-ps1	chr9	protein_coding	olfactory receptor 896, pseudogene 1
chr9	38260036	38260381	+	38260040	38260381	A5SS	0.5	50	50	ENSMUST00000217063.2	ENSMUSG00000094588.3	Olfr898	chr9	protein_coding	olfactory receptor 898
chr9	38340973;38341342	38341247;38341563	+	38340973	38341563	cassetteExon	0.5	100	100	ENSMUST00000216502.3	ENSMUSG00000052058.4	Olfr901	chr9	protein_coding	olfactory receptor 901
chr9	38569702	38570921	-	38569702;38570053	38569975;38570921	ES	0.5	50	50	ENSMUST00000214093.3	ENSMUSG00000094701.4	Olfr916	chr9	protein_coding	olfactory receptor 916
chr9	38584683	38585713	-	38584754	38585713	A3SS	0.5	50	50	ENSMUST00000215461.3	ENSMUSG00000046150.4	Olfr918	chr9	protein_coding	olfactory receptor 918
chr9	38613553	38614666	-	38613553	38614374	5pMXE	0.5	50	50	ENSMUST00000217508.2	ENSMUSG00000056961.3	Olfr919	chr9	protein_coding	olfactory receptor 919
chr9	38629683	38633669	+	38629683;38630629	38630554;38633669	ES	0.5	50	50	ENSMUST00000001544.12	ENSMUSG00000023186.15	Vwa5a	chr9	protein_coding	von Willebrand factor A domain containing 5A
chr9	38650016	38652394	+	38649912	38652394	A5SS	0.5	50	50	ENSMUST00000001544.12	ENSMUSG00000023186.15	Vwa5a	chr9	protein_coding	von Willebrand factor A domain containing 5A
chr9	38629683	38633669	+	38630629	38633669	5pMXE	0.5	50	50	ENSMUST00000129598.2	ENSMUSG00000023186.15	Vwa5a	chr9	protein_coding	von Willebrand factor A domain containing 5A
chr9	38684702;38685290	38685204;38686537	+	38684702	38686537	cassetteExon	0.5	100	100	ENSMUST00000217114.3	ENSMUSG00000049926.6	Olfr921	chr9	protein_coding	olfactory receptor 921
chr9	38738078	38738989	+	38738078	38739338	A3SS	0.5	50	50	ENSMUST00000213550.2	ENSMUSG00000044798.8	Olfr923	chr9	protein_coding	olfactory receptor 923
chr9	38898343	38899403	-	38898343	38899392	A5SS	0.5	50	50	ENSMUST00000216823.2	ENSMUSG00000057424.4	Olfr934	chr9	protein_coding	olfactory receptor 934
chr9	38930850	38934476	-	38930850	38934490	A5SS	0.33	50	50	ENSMUST00000214410.2	ENSMUSG00000058820.4	Olfr146	chr9	protein_coding	olfactory receptor 146
chr9	38930850	38934542	-	38930850	38934490	A5SS	0.33	50	50	ENSMUST00000214410.2	ENSMUSG00000058820.4	Olfr146	chr9	protein_coding	olfactory receptor 146
chr9	38930850	38934476	-	38930850	38934542	A5SS	0.33	50	50	ENSMUST00000215383.2	ENSMUSG00000058820.4	Olfr146	chr9	protein_coding	olfactory receptor 146
chr9	39039517	39055383	+	39039517;39041073	39040991;39055383	ES	0.5	50	50	ENSMUST00000216405.2	ENSMUSG00000049708.10	Olfr27	chr9	protein_coding	olfactory receptor 27
chr9	39077702;39090988	39090956;39095469	+	39077702	39095469	cassetteExon	0.5	100	100	ENSMUST00000213507.2	ENSMUSG00000094970.4	Olfr943	chr9	protein_coding	olfactory receptor 943
chr9	39077702;39090988	39090959;39095469	+	39077702	39095469	cassetteExon	0.5	100	100	ENSMUST00000213507.2	ENSMUSG00000094970.4	Olfr943	chr9	protein_coding	olfactory receptor 943
chr9	39077702	39090956	+	39077702	39090959	A3SS	0.33	50	50	ENSMUST00000071617.6	ENSMUSG00000094970.4	Olfr943	chr9	protein_coding	olfactory receptor 943
chr9	39119678	39128640	+	39119678;39120429	39120351;39128640	ES	0.5	50	50	ENSMUST00000215306.3	ENSMUSG00000096555.4	Olfr944	chr9	protein_coding	olfactory receptor 944
chr9	39201199	39210581	-	39201199	39210723	A5SS	0.33	50	50	ENSMUST00000214075.3	ENSMUSG00000111190.3	Olfr947-ps1	chr9	polymorphic_pseudogene	olfactory receptor 947, pseudogene 1
chr9	39201199	39210768	-	39201199	39210723	A5SS	0.33	50	50	ENSMUST00000214075.3	ENSMUSG00000111190.3	Olfr947-ps1	chr9	polymorphic_pseudogene	olfactory receptor 947, pseudogene 1
chr9	39201199	39210581	-	39201199	39210768	A5SS	0.33	50	50	ENSMUST00000214936.2	ENSMUSG00000111190.3	Olfr947-ps1	chr9	polymorphic_pseudogene	olfactory receptor 947, pseudogene 1
chr9	39382185	39383122	-	39379848	39383122	A3SS	0.5	50	50	ENSMUST00000219910.2	ENSMUSG00000063176.3	Olfr955	chr9	protein_coding	olfactory receptor 955
chr9	39396554	39405269	-	39396554;39404395	39404312;39405269	ES	0.5	50	50	ENSMUST00000215065.3	ENSMUSG00000062649.7	Olfr44	chr9	protein_coding	olfactory receptor 44
chr9	39464215	39465120	-	39463899	39465120	A3SS	0.5	50	50	ENSMUST00000215505.2	ENSMUSG00000050853.4	Olfr958	chr9	protein_coding	olfactory receptor 958
chr9	39486248	39486810	-	39486248	39486786	A5SS	0.5	50	50	ENSMUST00000216298.2	ENSMUSG00000059366.4	Olfr959	chr9	protein_coding	olfactory receptor 959
chr9	39514607	39515538	-	39514607	39515305	5pMXE	0.33	50	50	ENSMUST00000042485.11	ENSMUSG00000038112.16	AW551984	chr9	protein_coding	expressed sequence AW551984
chr9	39514607	39514823	-	39514607	39515305	A5SS	0.33	50	50	ENSMUST00000042485.11	ENSMUSG00000038112.16	AW551984	chr9	protein_coding	expressed sequence AW551984
chr9	39514607	39515538	-	39514607	39514823	5pMXE	0.33	50	50	ENSMUST00000119722.8	ENSMUSG00000038112.16	AW551984	chr9	protein_coding	expressed sequence AW551984
chr9	39622867	39625099	+	39622867	39630408	A3SS	0.5	50	50	ENSMUST00000215164.3	ENSMUSG00000095839.4	Olfr965	chr9	protein_coding	olfactory receptor 965
chr9	39777866	39784558	+	39777866;39784412	39784311;39784558	ES	0.5	50	50	ENSMUST00000215303.3	ENSMUSG00000094449.4	Olfr972	chr9	protein_coding	olfactory receptor 972
chr9	39868242	39872122	-	39868242	39870858	5pMXE	0.5	50	50	ENSMUST00000217630.2	ENSMUSG00000047352.7	Olfr976	chr9	protein_coding	olfactory receptor 976
chr9	39932909	39936447	+	39932909	39933627	A3SS	0.5	50	50	ENSMUST00000215956.3	ENSMUSG00000046678.7	Olfr981	chr9	protein_coding	olfactory receptor 981
chr9	40012811	40022235	-	40012811	40015566	5pMXE	0.33	50	50	ENSMUST00000213858.2	ENSMUSG00000045812.6	Olfr984	chr9	protein_coding	olfactory receptor 984
chr9	40012811	40025390	-	40012811	40015566	5pMXE	0.33	50	50	ENSMUST00000213858.2	ENSMUSG00000045812.6	Olfr984	chr9	protein_coding	olfactory receptor 984
chr9	40012811	40025390	-	40012811	40022235	5pMXE	0.33	50	50	ENSMUST00000214856.2	ENSMUSG00000045812.6	Olfr984	chr9	protein_coding	olfactory receptor 984
chr9	40060770	40061851	+	40060770;40061157	40061023;40061851	ES	0.5	50	50	ENSMUST00000046333.9	ENSMUSG00000040541.9	Tmem225	chr9	protein_coding	transmembrane protein 225
chr9	40092459	40098400	+	40092459	40097167	A3SS&ES	0.5	50	50	ENSMUST00000218134.2	ENSMUSG00000051095.8	Olfr986	chr9	protein_coding	olfactory receptor 986
chr9	40097272	40098400	+	40097272	40098294	A3SS	0.5	50	50	ENSMUST00000218134.2	ENSMUSG00000051095.8	Olfr986	chr9	protein_coding	olfactory receptor 986
chr9	40092459	40098400	+	40092459;40097272	40097167;40098400	ES	0.5	50	50	ENSMUST00000216720.2	ENSMUSG00000051095.8	Olfr986	chr9	protein_coding	olfactory receptor 986
chr9	40121192	40122192	+	40121192;40121856	40121737;40122192	ES	0.5	50	50	ENSMUST00000168691.2	ENSMUSG00000025602.14	Zfp202	chr9	protein_coding	zinc finger protein 202
chr9	40118990	40119601	+	40118986	40119601	A5SS	0.5	50	50	ENSMUST00000168691.2	ENSMUSG00000025602.14	Zfp202	chr9	protein_coding	zinc finger protein 202
chr9	40181343	40188368	+	40181343	40188364	A3SS	0.5	50	50	ENSMUST00000049941.12	ENSMUSG00000049281.17	Scn3b	chr9	protein_coding	sodium channel, voltage-gated, type III, beta
chr9	40199749	40199911	+	40199749	40199840	A3SS	0.33	50	50	ENSMUST00000049941.12	ENSMUSG00000049281.17	Scn3b	chr9	protein_coding	sodium channel, voltage-gated, type III, beta
chr9	40199749	40200518	+	40199749	40199840	A3SS	0.33	50	50	ENSMUST00000049941.12	ENSMUSG00000049281.17	Scn3b	chr9	protein_coding	sodium channel, voltage-gated, type III, beta
chr9	40188513	40190671	+	40188527	40190671	A5SS	0.5	50	50	ENSMUST00000049941.12	ENSMUSG00000049281.17	Scn3b	chr9	protein_coding	sodium channel, voltage-gated, type III, beta
chr9	40199749	40199911	+	40199749	40200518	A3SS	0.33	50	50	ENSMUST00000176547.2	ENSMUSG00000049281.17	Scn3b	chr9	protein_coding	sodium channel, voltage-gated, type III, beta
chr9	40211392;40211747	40211736;40214794	-	40211392	40214794	cassetteExon	0.5	100	100	ENSMUST00000137454.8	ENSMUSG00000040111.18	Gramd1b	chr9	protein_coding	GRAM domain containing 1B
chr9	40205723	40209242	-	40205723	40209282	A5SS	0.5	50	50	ENSMUST00000137454.8	ENSMUSG00000040111.18	Gramd1b	chr9	protein_coding	GRAM domain containing 1B
chr9	40244951	40274319	-	40244951	40257204	5pMXE	0.14	50	50	ENSMUST00000121357.8	ENSMUSG00000040111.18	Gramd1b	chr9	protein_coding	GRAM domain containing 1B
chr9	40244951	40287209	-	40244951	40257204	5pMXE	0.14	50	50	ENSMUST00000121357.8	ENSMUSG00000040111.18	Gramd1b	chr9	protein_coding	GRAM domain containing 1B
chr9	40244951	40302976	-	40244951	40257204	5pMXE	0.14	50	50	ENSMUST00000121357.8	ENSMUSG00000040111.18	Gramd1b	chr9	protein_coding	GRAM domain containing 1B
chr9	40244951	40303625	-	40244951	40257204	5pMXE	0.14	50	50	ENSMUST00000121357.8	ENSMUSG00000040111.18	Gramd1b	chr9	protein_coding	GRAM domain containing 1B
chr9	40244951	40312857	-	40244951	40257204	5pMXE	0.14	50	50	ENSMUST00000121357.8	ENSMUSG00000040111.18	Gramd1b	chr9	protein_coding	GRAM domain containing 1B
chr9	40244951	40324593	-	40244951	40257204	5pMXE	0.14	50	50	ENSMUST00000121357.8	ENSMUSG00000040111.18	Gramd1b	chr9	protein_coding	GRAM domain containing 1B
chr9	40228889	40231840	-	40228889	40238714	A5SS	0.5	50	50	ENSMUST00000121357.8	ENSMUSG00000040111.18	Gramd1b	chr9	protein_coding	GRAM domain containing 1B
chr9	40324670	40376767	-	40324670	40366590	5pMXE	0.33	50	50	ENSMUST00000045682.7	ENSMUSG00000040111.18	Gramd1b	chr9	protein_coding	GRAM domain containing 1B
chr9	40324670	40442316	-	40324670	40366590	5pMXE	0.33	50	50	ENSMUST00000045682.7	ENSMUSG00000040111.18	Gramd1b	chr9	protein_coding	GRAM domain containing 1B
chr9	40244951	40274319	-	40244951	40324593	A5SS	0.14	50	50	ENSMUST00000045682.7	ENSMUSG00000040111.18	Gramd1b	chr9	protein_coding	GRAM domain containing 1B
chr9	40244951	40287209	-	40244951	40324593	A5SS	0.14	50	50	ENSMUST00000045682.7	ENSMUSG00000040111.18	Gramd1b	chr9	protein_coding	GRAM domain containing 1B
chr9	40244951	40302976	-	40244951	40324593	A5SS	0.14	50	50	ENSMUST00000045682.7	ENSMUSG00000040111.18	Gramd1b	chr9	protein_coding	GRAM domain containing 1B
chr9	40244951	40303625	-	40244951	40324593	A5SS	0.14	50	50	ENSMUST00000045682.7	ENSMUSG00000040111.18	Gramd1b	chr9	protein_coding	GRAM domain containing 1B
chr9	40244951	40312857	-	40244951	40324593	A5SS	0.14	50	50	ENSMUST00000045682.7	ENSMUSG00000040111.18	Gramd1b	chr9	protein_coding	GRAM domain containing 1B
chr9	40244951	40302976	-	40244951	40287209	5pMXE	0.14	50	50	ENSMUST00000216821.2	ENSMUSG00000040111.18	Gramd1b	chr9	protein_coding	GRAM domain containing 1B
chr9	40244951	40303625	-	40244951	40287209	5pMXE	0.14	50	50	ENSMUST00000216821.2	ENSMUSG00000040111.18	Gramd1b	chr9	protein_coding	GRAM domain containing 1B
chr9	40244951	40312857	-	40244951	40287209	5pMXE	0.14	50	50	ENSMUST00000216821.2	ENSMUSG00000040111.18	Gramd1b	chr9	protein_coding	GRAM domain containing 1B
chr9	40244951	40274319	-	40244951	40287209	A5SS	0.14	50	50	ENSMUST00000216821.2	ENSMUSG00000040111.18	Gramd1b	chr9	protein_coding	GRAM domain containing 1B
chr9	40324670	40376767	-	40324670	40442316	A5SS	0.33	50	50	ENSMUST00000119373.9	ENSMUSG00000040111.18	Gramd1b	chr9	protein_coding	GRAM domain containing 1B
chr9	40244951	40274319	-	40244951	40312857	A5SS	0.14	50	50	ENSMUST00000211853.2	ENSMUSG00000040111.18	Gramd1b	chr9	protein_coding	GRAM domain containing 1B
chr9	40244951	40302976	-	40244951	40312857	A5SS	0.14	50	50	ENSMUST00000211853.2	ENSMUSG00000040111.18	Gramd1b	chr9	protein_coding	GRAM domain containing 1B
chr9	40244951	40303625	-	40244951	40312857	A5SS	0.14	50	50	ENSMUST00000211853.2	ENSMUSG00000040111.18	Gramd1b	chr9	protein_coding	GRAM domain containing 1B
chr9	40244951	40303625	-	40244951	40302976	5pMXE	0.14	50	50	ENSMUST00000118159.8	ENSMUSG00000040111.18	Gramd1b	chr9	protein_coding	GRAM domain containing 1B
chr9	40244951	40274319	-	40244951	40302976	A5SS	0.14	50	50	ENSMUST00000118159.8	ENSMUSG00000040111.18	Gramd1b	chr9	protein_coding	GRAM domain containing 1B
chr9	40244951;40274384	40274319;40303625	-	40244951	40303625	cassetteExon	0.5	100	100	ENSMUST00000137189.8	ENSMUSG00000040111.18	Gramd1b	chr9	protein_coding	GRAM domain containing 1B
chr9	40324667	40376767	-	40324670	40376767	A3SS	0.5	50	50	ENSMUST00000148170.2	ENSMUSG00000040111.18	Gramd1b	chr9	protein_coding	GRAM domain containing 1B
chr9	40253791	40254500	+	40253791	40254677	A3SS	0.5	50	50	ENSMUST00000140807.9	ENSMUSG00000087047.9	1700110K17Rik	chr9	lncRNA	RIKEN cDNA 1700110K17 gene
chr9	40244883	40253334	+	40234816	40253334	A5SS	0.5	50	50	ENSMUST00000140807.9	ENSMUSG00000087047.9	1700110K17Rik	chr9	lncRNA	RIKEN cDNA 1700110K17 gene
chr9	40468874;40469348	40469240;40470586	-	40468874	40470586	cassetteExon	0.5	100	100	ENSMUST00000213520.2	ENSMUSG00000111858.2	Gm48277	chr9	lncRNA	predicted gene, 48277
chr9	40597655	40672197	+	40597655;40648669	40648594;40672197	ES	0.5	50	50	ENSMUST00000139577.2	ENSMUSG00000032024.11	Clmp	chr9	protein_coding	CXADR-like membrane protein
chr9	40685575	40685659	+	40683824	40685659	A5SS	0.5	50	50	ENSMUST00000034522.8	ENSMUSG00000032024.11	Clmp	chr9	protein_coding	CXADR-like membrane protein
chr9	40672955	40673527	-	40672955	40673819	A5SS	0.5	50	50	ENSMUST00000213907.2	ENSMUSG00000111189.2	Gm48293	chr9	lncRNA	predicted gene, 48293
chr9	40692388	40694219	-	40692491	40694219	A3SS	0.5	50	50	ENSMUST00000149386.8	ENSMUSG00000087135.8	Gm16096	chr9	lncRNA	predicted gene 16096
chr9	40715991	40721239	+	40715991	40716228	3pMXE	0.5	50	50	ENSMUST00000015800.16	ENSMUSG00000015656.18	Hspa8	chr9	protein_coding	heat shock protein 8
chr9	40712644	40713285	+	40712644	40713214	A3SS	0.5	50	50	ENSMUST00000015800.16	ENSMUSG00000015656.18	Hspa8	chr9	protein_coding	heat shock protein 8
chr9	40713919	40714092	+	40713919	40714035	A3SS	0.5	50	50	ENSMUST00000015800.16	ENSMUSG00000015656.18	Hspa8	chr9	protein_coding	heat shock protein 8
chr9	40712916	40713214	+	40712644	40713214	A5SS	0.5	50	50	ENSMUST00000015800.16	ENSMUSG00000015656.18	Hspa8	chr9	protein_coding	heat shock protein 8
chr9	40872508	40873502	-	40872508	40875345	A5SS	0.5	50	50	ENSMUST00000034521.8	ENSMUSG00000032023.8	Jhy	chr9	protein_coding	junctional cadherin complex regulator
chr9	40889547	40892452	-	40889550	40892452	A3SS	0.5	50	50	ENSMUST00000180872.9	ENSMUSG00000032021.15	Crtam	chr9	protein_coding	cytotoxic and regulatory T cell molecule
chr9	40895657	40899077	-	40895678	40899077	A3SS	0.5	50	50	ENSMUST00000188848.8	ENSMUSG00000032021.15	Crtam	chr9	protein_coding	cytotoxic and regulatory T cell molecule
chr9	40962666	41072700	-	40962666	41068595	5pMXE	0.2	50	50	ENSMUST00000044155.15	ENSMUSG00000032020.16	Ubash3b	chr9	protein_coding	ubiquitin associated and SH3 domain containing, B
chr9	40962666;40988775	40988683;41068595	-	40962666	41068595	cassetteExon	0.5	100	100	ENSMUST00000044155.15	ENSMUSG00000032020.16	Ubash3b	chr9	protein_coding	ubiquitin associated and SH3 domain containing, B
chr9	40962666	40971253	-	40962666	41068595	A5SS	0.2	50	50	ENSMUST00000044155.15	ENSMUSG00000032020.16	Ubash3b	chr9	protein_coding	ubiquitin associated and SH3 domain containing, B
chr9	40962666	40990539	-	40962666	41068595	A5SS	0.2	50	50	ENSMUST00000044155.15	ENSMUSG00000032020.16	Ubash3b	chr9	protein_coding	ubiquitin associated and SH3 domain containing, B
chr9	40962666	41072700	-	40962666	40990539	5pMXE	0.2	50	50	ENSMUST00000151485.8	ENSMUSG00000032020.16	Ubash3b	chr9	protein_coding	ubiquitin associated and SH3 domain containing, B
chr9	40962666	40971253	-	40962666	40990539	A5SS	0.2	50	50	ENSMUST00000151485.8	ENSMUSG00000032020.16	Ubash3b	chr9	protein_coding	ubiquitin associated and SH3 domain containing, B
chr9	40962666	40988683	-	40962666	40990539	A5SS	0.2	50	50	ENSMUST00000151485.8	ENSMUSG00000032020.16	Ubash3b	chr9	protein_coding	ubiquitin associated and SH3 domain containing, B
chr9	40962666	41072700	-	40962666;40971349	40971253;41072700	ES	0.33	50	50	ENSMUST00000124819.2	ENSMUSG00000032020.16	Ubash3b	chr9	protein_coding	ubiquitin associated and SH3 domain containing, B
chr9	41071365	41072700	-	40971349	41072700	A3SS	0.33	50	50	ENSMUST00000124819.2	ENSMUSG00000032020.16	Ubash3b	chr9	protein_coding	ubiquitin associated and SH3 domain containing, B
chr9	40962666	40988683	-	40962666	40971253	A5SS&ES	0.2	50	50	ENSMUST00000124819.2	ENSMUSG00000032020.16	Ubash3b	chr9	protein_coding	ubiquitin associated and SH3 domain containing, B
chr9	41071365	41072700	-	40962666	41072700	A3SS	0.33	50	50	ENSMUST00000129906.2	ENSMUSG00000032020.16	Ubash3b	chr9	protein_coding	ubiquitin associated and SH3 domain containing, B
chr9	40962666	40988683	-	40962666	41072700	A5SS	0.2	50	50	ENSMUST00000129906.2	ENSMUSG00000032020.16	Ubash3b	chr9	protein_coding	ubiquitin associated and SH3 domain containing, B
chr9	41107484	41122134	+	41103851	41122134	A5SS	0.33	50	50	ENSMUST00000213914.2	ENSMUSG00000100837.8	1700063D05Rik	chr9	lncRNA	RIKEN cDNA 1700063D05 gene
chr9	41117625	41122134	+	41103851	41122134	A5SS	0.33	50	50	ENSMUST00000213914.2	ENSMUSG00000100837.8	1700063D05Rik	chr9	lncRNA	RIKEN cDNA 1700063D05 gene
chr9	41128347	41128581	+	41128109	41128581	A5SS	0.5	50	50	ENSMUST00000213914.2	ENSMUSG00000100837.8	1700063D05Rik	chr9	lncRNA	RIKEN cDNA 1700063D05 gene
chr9	41117625	41122134	+	41107484	41122134	A5SS	0.33	50	50	ENSMUST00000214568.2	ENSMUSG00000100837.8	1700063D05Rik	chr9	lncRNA	RIKEN cDNA 1700063D05 gene
chr9	41304595	41313420	+	41304595;41304713	41304677;41313420	ES	0.25	50	50	ENSMUST00000233562.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41313559	41399490	+	41313559;41386449	41386302;41399490	ES	0.33	50	50	ENSMUST00000233562.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41386449	41439419	+	41386449;41399564	41399490;41439419	ES	0.14	50	50	ENSMUST00000233562.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41313559;41379849	41379690;41439419	+	41313559;41399564	41386302;41439419	MXE	0.5	100	100	ENSMUST00000233562.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41386449;41389777	41389630;41439419	+	41386449;41399564	41399490;41439419	MXE	0.5	100	100	ENSMUST00000233562.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41386449;41398824	41398650;41399490	+	41386449	41399490	cassetteExon	0.5	100	100	ENSMUST00000233562.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41386449;41437792	41437550;41439419	+	41386449;41399564	41399490;41439419	MXE	0.5	100	100	ENSMUST00000233562.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41386449;41437796	41437550;41439419	+	41386449;41399564	41399490;41439419	MXE	0.5	100	100	ENSMUST00000233562.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41399564;41437792	41437550;41439419	+	41399564	41439419	cassetteExon	0.5	100	100	ENSMUST00000233562.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41399564;41437796	41437550;41439419	+	41399564	41439419	cassetteExon	0.5	100	100	ENSMUST00000233562.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41304595	41304674	+	41304595	41304677	A3SS	0.33	50	50	ENSMUST00000233562.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41313559	41343050	+	41313559	41386302	A3SS	0.16	50	50	ENSMUST00000233562.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41313559	41370960	+	41313559	41386302	A3SS	0.16	50	50	ENSMUST00000233562.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41240204	41313420	+	41304713	41313420	A5SS&ES	0.25	50	50	ENSMUST00000233562.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41287972	41304490	+	41238671	41304490	A5SS	0.5	50	50	ENSMUST00000233562.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41287972	41313420	+	41304713	41313420	A5SS&ES	0.25	50	50	ENSMUST00000233562.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41313559	41439419	+	41313559	41399490	3pMXE	0.16	50	50	ENSMUST00000233001.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41304595;41304713	41304674;41313420	+	41304595	41313420	cassetteExon	0.5	100	100	ENSMUST00000233001.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41313559	41343050	+	41313559	41399490	A3SS	0.16	50	50	ENSMUST00000233001.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41313559	41370960	+	41313559	41399490	A3SS	0.16	50	50	ENSMUST00000233001.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41313559	41379690	+	41313559	41399490	A3SS	0.16	50	50	ENSMUST00000233001.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41240204	41313420	+	41304595	41313420	A5SS&ES	0.25	50	50	ENSMUST00000233001.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41287972	41313420	+	41304595	41313420	A5SS&ES	0.25	50	50	ENSMUST00000233001.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41398824	41399490	+	41313559	41399490	A5SS	0.33	50	50	ENSMUST00000233001.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41439496	41565559	+	41439496	41523856	3pMXE	0.12	50	50	ENSMUST00000212373.3	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41439496	41605430	+	41439496	41523856	3pMXE	0.12	50	50	ENSMUST00000212373.3	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41313559;41379849	41379690;41439419	+	41313559	41439419	cassetteExon	0.5	100	100	ENSMUST00000212373.3	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41313559;41386449	41386302;41439419	+	41313559	41439419	cassetteExon	0.5	100	100	ENSMUST00000212373.3	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41313559;41399564	41399490;41439419	+	41313559	41439419	cassetteExon	0.5	100	100	ENSMUST00000212373.3	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41313559	41343050	+	41313559	41439419	A3SS	0.16	50	50	ENSMUST00000212373.3	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41313559	41370960	+	41313559	41439419	A3SS	0.16	50	50	ENSMUST00000212373.3	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41439496	41452192	+	41439496	41523856	A3SS	0.12	50	50	ENSMUST00000212373.3	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41439496	41469305	+	41439496	41523856	A3SS	0.12	50	50	ENSMUST00000212373.3	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41439496	41487704	+	41439496	41523856	A3SS	0.12	50	50	ENSMUST00000212373.3	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41439496	41501270	+	41439496	41523856	A3SS	0.12	50	50	ENSMUST00000212373.3	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41439496	41501495	+	41439496	41523856	A3SS	0.12	50	50	ENSMUST00000212373.3	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41389777	41439419	+	41313559	41439419	A5SS	0.14	50	50	ENSMUST00000212373.3	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41437792	41439419	+	41313559	41439419	A5SS	0.14	50	50	ENSMUST00000212373.3	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41437796	41439419	+	41313559	41439419	A5SS	0.14	50	50	ENSMUST00000212373.3	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41523856	+	41439496	41523856	A5SS	0.33	50	50	ENSMUST00000212373.3	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41511750	41523856	+	41439496	41523856	A5SS	0.33	50	50	ENSMUST00000212373.3	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41313559;41386449	41386302;41439419	+	41313559;41379849	41379690;41439419	MXE	0.5	100	100	ENSMUST00000232787.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41313559;41399564	41399490;41439419	+	41313559;41379849	41379690;41439419	MXE	0.5	100	100	ENSMUST00000232787.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41313559	41343050	+	41313559	41379690	A3SS	0.16	50	50	ENSMUST00000232787.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41313559	41370960	+	41313559	41379690	A3SS	0.16	50	50	ENSMUST00000232787.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41389777	41439419	+	41379849	41439419	A5SS	0.14	50	50	ENSMUST00000232787.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41437792	41439419	+	41379849	41439419	A5SS	0.14	50	50	ENSMUST00000232787.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41437796	41439419	+	41379849	41439419	A5SS	0.14	50	50	ENSMUST00000232787.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41313559	41343050	+	41313559	41370960	A3SS	0.16	50	50	ENSMUST00000233028.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41313559;41386449	41386302;41439419	+	41313559;41399564	41399490;41439419	MXE	0.5	100	100	ENSMUST00000233820.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41287972	41313420	+	41240204	41313420	A5SS	0.25	50	50	ENSMUST00000233820.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41389777	41439419	+	41399564	41439419	A5SS&ES	0.14	50	50	ENSMUST00000233820.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41287972	41313420	+	41287972;41304595	41304490;41313420	ES	0.33	50	50	ENSMUST00000233800.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41439496;41523967	41523856;41524579	+	41439496;41487845	41487704;41524579	MXE	0.5	100	100	ENSMUST00000233987.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41439496	41452192	+	41439496	41487704	A3SS	0.16	50	50	ENSMUST00000233987.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41439496	41469305	+	41439496	41487704	A3SS	0.16	50	50	ENSMUST00000233987.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41439496	41501270	+	41439496	41487704	A3SS&ES	0.16	50	50	ENSMUST00000233987.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41439496	41501495	+	41439496	41487704	A3SS&ES	0.16	50	50	ENSMUST00000233987.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41487845	41501270	+	41487845	41524579	A3SS	0.5	50	50	ENSMUST00000233987.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41524579	+	41487845	41524579	A5SS	0.33	50	50	ENSMUST00000233987.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41439496	41452192	+	41439496	41605430	A3SS	0.12	50	50	ENSMUST00000233927.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41439496	41469305	+	41439496	41605430	A3SS	0.12	50	50	ENSMUST00000233927.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41439496	41487704	+	41439496	41605430	A3SS	0.12	50	50	ENSMUST00000233927.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41439496	41501270	+	41439496	41605430	A3SS	0.12	50	50	ENSMUST00000233927.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41439496	41501495	+	41439496	41605430	A3SS	0.12	50	50	ENSMUST00000233927.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41439496	41565559	+	41439496	41605430	A3SS	0.12	50	50	ENSMUST00000233927.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41287972;41304713	41304490;41313420	+	41287972	41313420	cassetteExon	0.5	100	100	ENSMUST00000233406.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41439496	41501495	+	41439496	41501270	3pMXE	0.12	50	50	ENSMUST00000188945.7	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41439496	41565559	+	41439496	41501270	3pMXE	0.12	50	50	ENSMUST00000188945.7	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41439496;41487845	41487704;41501270	+	41439496	41501270	cassetteExon	0.5	100	100	ENSMUST00000188945.7	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41439496	41452192	+	41439496	41501270	A3SS	0.12	50	50	ENSMUST00000188945.7	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41439496	41469305	+	41439496	41501270	A3SS	0.12	50	50	ENSMUST00000188945.7	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41491494	41501270	+	41439496	41501270	A5SS	0.16	50	50	ENSMUST00000188945.7	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492066	41501270	+	41439496	41501270	A5SS	0.16	50	50	ENSMUST00000188945.7	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41501270	+	41439496	41501270	A5SS	0.16	50	50	ENSMUST00000188945.7	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41499457	41501270	+	41439496	41501270	A5SS	0.16	50	50	ENSMUST00000188945.7	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41287972	41313420	+	41287972	41304490	3pMXE	0.5	50	50	ENSMUST00000232890.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41439496	41469305	+	41439496	41452192	3pMXE	0.12	50	50	ENSMUST00000232964.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41439496	41501495	+	41439496	41452192	3pMXE	0.12	50	50	ENSMUST00000232964.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41439496	41565559	+	41439496	41452192	3pMXE	0.12	50	50	ENSMUST00000232964.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41313559	41439419	+	41386449	41439419	5pMXE	0.14	50	50	ENSMUST00000233321.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41379849	41439419	+	41386449	41439419	5pMXE	0.14	50	50	ENSMUST00000233321.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41439496	41565559	+	41439496	41501495	3pMXE	0.12	50	50	ENSMUST00000233321.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41386449;41389777	41389630;41439419	+	41386449	41439419	cassetteExon	0.5	100	100	ENSMUST00000233321.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41386449;41437792	41437550;41439419	+	41386449	41439419	cassetteExon	0.5	100	100	ENSMUST00000233321.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41386449;41437796	41437550;41439419	+	41386449	41439419	cassetteExon	0.5	100	100	ENSMUST00000233321.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41386449	41398650	+	41386449	41439419	A3SS	0.2	50	50	ENSMUST00000233321.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41439496	41469305	+	41439496	41501495	A3SS	0.12	50	50	ENSMUST00000233321.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41499457	41501495	+	41439496	41501495	A5SS	0.5	50	50	ENSMUST00000233321.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41386449;41389777	41389630;41439419	+	41386449;41437796	41437550;41439419	MXE	0.5	100	100	ENSMUST00000233366.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41386449;41399564	41399490;41437550	+	41386449	41437550	cassetteExon	0.5	100	100	ENSMUST00000233366.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41386449	41398650	+	41386449	41437550	A3SS	0.2	50	50	ENSMUST00000233366.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41437792	41439419	+	41437796	41439419	A5SS	0.2	50	50	ENSMUST00000233366.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41313559	41399490	+	41386449	41399490	5pMXE	0.33	50	50	ENSMUST00000232710.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41491494	41501270	+	41487845	41501270	A5SS	0.16	50	50	ENSMUST00000188277.9	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492066	41501270	+	41487845	41501270	A5SS	0.16	50	50	ENSMUST00000188277.9	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41501270	+	41487845	41501270	A5SS	0.16	50	50	ENSMUST00000188277.9	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41499457	41501270	+	41487845	41501270	A5SS	0.16	50	50	ENSMUST00000188277.9	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41523967	41537416	+	41523967	41524579	3pMXE	0.33	50	50	ENSMUST00000233288.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41523967	41524099	+	41523967	41524579	A3SS	0.33	50	50	ENSMUST00000233288.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41524579	+	41523967	41524579	A5SS&ES	0.33	50	50	ENSMUST00000233288.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41386449;41389777	41389630;41439419	+	41386449;41437792	41398650;41439419	MXE	0.5	100	100	ENSMUST00000232773.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41386449;41437792	41437550;41439419	+	41386449;41389777	41389630;41439419	MXE	0.5	100	100	ENSMUST00000233563.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41386449	41398650	+	41386449	41389630	A3SS&ES	0.2	50	50	ENSMUST00000233563.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41491494	41492009	+	41491494	41501516	A3SS	0.33	50	50	ENSMUST00000188774.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41491494	41501270	+	41491494	41501516	A3SS	0.33	50	50	ENSMUST00000188774.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41501516	+	41491494	41501516	A5SS	0.5	50	50	ENSMUST00000188774.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41491494	41501516	+	41491494;41492698	41492009;41501516	ES	0.5	50	50	ENSMUST00000181214.4	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41523856	+	41492698	41501516	3pMXE	0.12	50	50	ENSMUST00000181214.4	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41524579	+	41492698	41501516	3pMXE	0.12	50	50	ENSMUST00000181214.4	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41525317	+	41492698	41501516	3pMXE	0.12	50	50	ENSMUST00000181214.4	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41491494	41501270	+	41491494	41492009	A3SS&ES	0.33	50	50	ENSMUST00000181214.4	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41497533	+	41492698	41501516	A3SS	0.12	50	50	ENSMUST00000181214.4	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41498182	+	41492698	41501516	A3SS	0.12	50	50	ENSMUST00000181214.4	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41501206	+	41492698	41501516	A3SS	0.12	50	50	ENSMUST00000181214.4	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41501270	+	41492698	41501516	A3SS	0.12	50	50	ENSMUST00000181214.4	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41491494;41492066	41492009;41501270	+	41491494	41501270	cassetteExon	0.5	100	100	ENSMUST00000233256.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41501270	+	41491494	41501270	A5SS	0.16	50	50	ENSMUST00000233256.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41499457	41501270	+	41491494	41501270	A5SS	0.16	50	50	ENSMUST00000233256.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492066	41501270	+	41492066	41492232	3pMXE	0.5	50	50	ENSMUST00000233968.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492066;41492698	41492232;41501270	+	41492066	41501270	cassetteExon	0.5	100	100	ENSMUST00000233107.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41499457	41501270	+	41492066	41501270	A5SS	0.25	50	50	ENSMUST00000233107.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41523856	+	41492698	41501206	3pMXE	0.12	50	50	ENSMUST00000233926.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41524579	+	41492698	41501206	3pMXE	0.12	50	50	ENSMUST00000233926.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41525317	+	41492698	41501206	3pMXE	0.12	50	50	ENSMUST00000233926.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41497533	+	41492698	41501206	A3SS	0.12	50	50	ENSMUST00000233926.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41498182	+	41492698	41501206	A3SS	0.12	50	50	ENSMUST00000233926.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41501270	+	41492698	41501206	A3SS	0.12	50	50	ENSMUST00000233926.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41524579	+	41492698	41523856	3pMXE	0.12	50	50	ENSMUST00000180622.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41525317	+	41492698	41523856	3pMXE	0.12	50	50	ENSMUST00000180622.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41497533	+	41492698	41523856	A3SS	0.12	50	50	ENSMUST00000180622.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41498182	+	41492698	41523856	A3SS	0.12	50	50	ENSMUST00000180622.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41501270	+	41492698	41523856	A3SS	0.12	50	50	ENSMUST00000180622.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41511750	41523856	+	41492698	41523856	A5SS	0.33	50	50	ENSMUST00000180622.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698;41523967	41523856;41524579	+	41492698	41524579	cassetteExon	0.5	100	100	ENSMUST00000180818.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41497533	+	41492698	41524579	A3SS	0.12	50	50	ENSMUST00000180818.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41498182	+	41492698	41524579	A3SS	0.12	50	50	ENSMUST00000180818.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41501270	+	41492698	41524579	A3SS	0.12	50	50	ENSMUST00000180818.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41525317	+	41492698	41524579	A3SS&ES	0.12	50	50	ENSMUST00000180818.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41501270	+	41492698	41497533	3pMXE	0.12	50	50	ENSMUST00000233719.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41525317	+	41492698	41497533	3pMXE	0.12	50	50	ENSMUST00000233719.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41498182	+	41492698	41497533	A3SS	0.12	50	50	ENSMUST00000233719.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41498182	+	41492698	41525317	A3SS	0.12	50	50	ENSMUST00000232901.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41501270	+	41492698	41525317	A3SS	0.12	50	50	ENSMUST00000232901.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492698	41501270	+	41492698	41498182	A3SS&ES	0.2	50	50	ENSMUST00000233934.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41499457	41501270	+	41499457	41501495	A3SS	0.5	50	50	ENSMUST00000233934.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41492066	41501270	+	41492698	41501270	5pMXE	0.16	50	50	ENSMUST00000181955.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41499457	41501270	+	41492698	41501270	A5SS	0.16	50	50	ENSMUST00000181955.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41523967	41524099	+	41523967	41537416	A3SS	0.33	50	50	ENSMUST00000233259.2	ENSMUSG00000074415.15	Mir100hg	chr9	lncRNA	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
chr9	41439496	41469305	+	41439496	41565559	A3SS	0.12	50	50	ENSMUST00000212079.2	ENSMUSG00000111462.3	Gm49317	chr9	lncRNA	predicted gene, 49317
chr9	41439496	41487704	+	41439496	41565559	A3SS	0.12	50	50	ENSMUST00000212079.2	ENSMUSG00000111462.3	Gm49317	chr9	lncRNA	predicted gene, 49317
chr9	41563246	41565559	+	41439496	41565559	A5SS	0.5	50	50	ENSMUST00000212079.2	ENSMUSG00000111462.3	Gm49317	chr9	lncRNA	predicted gene, 49317
chr9	41464636	41466573	-	41463191	41466573	A3SS	0.5	50	50	ENSMUST00000213487.2	ENSMUSG00000111854.2	Gm48740	chr9	lncRNA	predicted gene, 48740
chr9	41715272	41764053	-	41715272	41716859	5pMXE	0.5	50	50	ENSMUST00000217147.2	ENSMUSG00000111511.2	6720432D03Rik	chr9	lncRNA	RIKEN cDNA 6720432D03 gene
chr9	41778807	41787391	-	41778807;41785860	41785739;41787391	ES	0.5	50	50	ENSMUST00000216860.2	ENSMUSG00000111511.2	6720432D03Rik	chr9	lncRNA	RIKEN cDNA 6720432D03 gene
chr9	41774482	41776944	-	41764158	41776944	A3SS	0.5	50	50	ENSMUST00000216860.2	ENSMUSG00000111511.2	6720432D03Rik	chr9	lncRNA	RIKEN cDNA 6720432D03 gene
chr9	41785860	41786840	-	41785860	41787391	A5SS	0.5	50	50	ENSMUST00000216860.2	ENSMUSG00000111511.2	6720432D03Rik	chr9	lncRNA	RIKEN cDNA 6720432D03 gene
chr9	41731713	41732533	+	41717178	41732533	A5SS	0.5	50	50	ENSMUST00000215885.2	ENSMUSG00000110981.2	Gm35940	chr9	lncRNA	predicted gene, 35940
chr9	41896936	41897018	-	41896936	41898762	A5SS	0.5	50	50	ENSMUST00000060989.9	ENSMUSG00000049313.9	Sorl1	chr9	protein_coding	sortilin-related receptor, LDLR class A repeats-containing
chr9	42053427	42054292	+	42053427	42054120	A3SS	0.5	50	50	ENSMUST00000217076.2	ENSMUSG00000111167.2	Gm39321	chr9	lncRNA	predicted gene, 39321
chr9	42053790	42054120	+	42053427	42054120	A5SS	0.5	50	50	ENSMUST00000217076.2	ENSMUSG00000111167.2	Gm39321	chr9	lncRNA	predicted gene, 39321
chr9	42113085	42116911	-	42097631	42116911	A3SS	0.5	50	50	ENSMUST00000213343.2	ENSMUSG00000111767.2	4930546K05Rik	chr9	lncRNA	RIKEN cDNA 4930546K05 gene
chr9	42097631	42104322	-	42097631	42116911	A5SS	0.5	50	50	ENSMUST00000213343.2	ENSMUSG00000111767.2	4930546K05Rik	chr9	lncRNA	RIKEN cDNA 4930546K05 gene
chr9	42171195	42175502	-	42171195;42173427	42173347;42175502	ES	0.5	50	50	ENSMUST00000052725.15	ENSMUSG00000032018.15	Sc5d	chr9	protein_coding	sterol-C5-desaturase
chr9	42173427	42175418	-	42173427	42175502	A5SS	0.5	50	50	ENSMUST00000052725.15	ENSMUSG00000032018.15	Sc5d	chr9	protein_coding	sterol-C5-desaturase
chr9	42251664	42254925	-	42251661	42254925	A3SS	0.5	50	50	ENSMUST00000159603.2	ENSMUSG00000037705.14	Tecta	chr9	protein_coding	tectorin alpha
chr9	42255205	42256699	-	42255220	42256699	A3SS	0.5	50	50	ENSMUST00000042190.14	ENSMUSG00000037705.14	Tecta	chr9	protein_coding	tectorin alpha
chr9	42363058	42372570	-	42363058	42368854	5pMXE	0.16	50	50	ENSMUST00000125995.8	ENSMUSG00000037287.16	Tbcel	chr9	protein_coding	tubulin folding cofactor E-like
chr9	42363058	42383314	-	42363058	42368854	5pMXE	0.16	50	50	ENSMUST00000125995.8	ENSMUSG00000037287.16	Tbcel	chr9	protein_coding	tubulin folding cofactor E-like
chr9	42363058	42383362	-	42363058	42368854	5pMXE	0.16	50	50	ENSMUST00000125995.8	ENSMUSG00000037287.16	Tbcel	chr9	protein_coding	tubulin folding cofactor E-like
chr9	42363058	42383476	-	42363058	42368854	5pMXE	0.16	50	50	ENSMUST00000125995.8	ENSMUSG00000037287.16	Tbcel	chr9	protein_coding	tubulin folding cofactor E-like
chr9	42363058	42419002	-	42363058	42368854	5pMXE	0.16	50	50	ENSMUST00000125995.8	ENSMUSG00000037287.16	Tbcel	chr9	protein_coding	tubulin folding cofactor E-like
chr9	42327445	42339368	-	42327445	42348411	A5SS	0.5	50	50	ENSMUST00000125995.8	ENSMUSG00000037287.16	Tbcel	chr9	protein_coding	tubulin folding cofactor E-like
chr9	42363058	42419002	-	42363058	42383362	5pMXE	0.16	50	50	ENSMUST00000066148.12	ENSMUSG00000037287.16	Tbcel	chr9	protein_coding	tubulin folding cofactor E-like
chr9	42363058	42372570	-	42363058	42383362	A5SS	0.16	50	50	ENSMUST00000066148.12	ENSMUSG00000037287.16	Tbcel	chr9	protein_coding	tubulin folding cofactor E-like
chr9	42363058	42383314	-	42363058	42383362	A5SS	0.16	50	50	ENSMUST00000066148.12	ENSMUSG00000037287.16	Tbcel	chr9	protein_coding	tubulin folding cofactor E-like
chr9	42363058	42383476	-	42363058	42383362	A5SS	0.16	50	50	ENSMUST00000066148.12	ENSMUSG00000037287.16	Tbcel	chr9	protein_coding	tubulin folding cofactor E-like
chr9	42363058	42383314	-	42363058	42372570	5pMXE	0.16	50	50	ENSMUST00000066179.14	ENSMUSG00000037287.16	Tbcel	chr9	protein_coding	tubulin folding cofactor E-like
chr9	42363058	42383476	-	42363058	42372570	5pMXE	0.16	50	50	ENSMUST00000066179.14	ENSMUSG00000037287.16	Tbcel	chr9	protein_coding	tubulin folding cofactor E-like
chr9	42363058	42419002	-	42363058	42372570	5pMXE	0.16	50	50	ENSMUST00000066179.14	ENSMUSG00000037287.16	Tbcel	chr9	protein_coding	tubulin folding cofactor E-like
chr9	42363058	42419002	-	42363058	42383476	5pMXE	0.16	50	50	ENSMUST00000138506.8	ENSMUSG00000037287.16	Tbcel	chr9	protein_coding	tubulin folding cofactor E-like
chr9	42363058	42383314	-	42363058	42383476	A5SS	0.16	50	50	ENSMUST00000138506.8	ENSMUSG00000037287.16	Tbcel	chr9	protein_coding	tubulin folding cofactor E-like
chr9	42363058	42419002	-	42363058	42383314	5pMXE	0.16	50	50	ENSMUST00000128959.8	ENSMUSG00000037287.16	Tbcel	chr9	protein_coding	tubulin folding cofactor E-like
chr9	42938591	42953887	-	42938591;42951892	42951836;42953887	ES	0.5	50	50	ENSMUST00000165665.9	ENSMUSG00000059495.15	Arhgef12	chr9	protein_coding	Rho guanine nucleotide exchange factor (GEF) 12
chr9	42955583	43018459	-	42955583	43016474	5pMXE	0.5	50	50	ENSMUST00000165665.9	ENSMUSG00000059495.15	Arhgef12	chr9	protein_coding	Rho guanine nucleotide exchange factor (GEF) 12
chr9	42919404	42921475	-	42919407	42921475	A3SS	0.5	50	50	ENSMUST00000165665.9	ENSMUSG00000059495.15	Arhgef12	chr9	protein_coding	Rho guanine nucleotide exchange factor (GEF) 12
chr9	42932079	42934107	-	42932079	42934111	A5SS	0.5	50	50	ENSMUST00000165665.9	ENSMUSG00000059495.15	Arhgef12	chr9	protein_coding	Rho guanine nucleotide exchange factor (GEF) 12
chr9	43020633	43024756	-	43023153	43024756	A3SS	0.5	50	50	ENSMUST00000061833.6	ENSMUSG00000048503.8	Tlcd5	chr9	protein_coding	TLC domain containing 5
chr9	43024930	43027772	-	43024955	43027772	A3SS	0.5	50	50	ENSMUST00000061833.6	ENSMUSG00000048503.8	Tlcd5	chr9	protein_coding	TLC domain containing 5
chr9	43023153	43024810	-	43023153	43024756	A5SS	0.5	50	50	ENSMUST00000061833.6	ENSMUSG00000048503.8	Tlcd5	chr9	protein_coding	TLC domain containing 5
chr9	43024955	43027697	-	43024955	43027772	A5SS	0.5	50	50	ENSMUST00000061833.6	ENSMUSG00000048503.8	Tlcd5	chr9	protein_coding	TLC domain containing 5
chr9	43110395	43121477	-	43110395	43116951	5pMXE	0.5	50	50	ENSMUST00000176636.5	ENSMUSG00000032015.17	Pou2f3	chr9	protein_coding	POU domain, class 2, transcription factor 3
chr9	43134136	43135173	-	43134136	43135194	A5SS	0.5	50	50	ENSMUST00000034512.7	ENSMUSG00000032014.7	Oaf	chr9	protein_coding	out at first homolog
chr9	43176783	43191151	+	43176783	43177197	3pMXE	0.5	50	50	ENSMUST00000210802.2	ENSMUSG00000095385.4	D630033O11Rik	chr9	lncRNA	RIKEN cDNA D630033O11 gene
chr9	43171356	43176613	+	43171208	43176613	A5SS	0.33	50	50	ENSMUST00000210802.2	ENSMUSG00000095385.4	D630033O11Rik	chr9	lncRNA	RIKEN cDNA D630033O11 gene
chr9	43175759	43176613	+	43171208	43176613	A5SS	0.33	50	50	ENSMUST00000210802.2	ENSMUSG00000095385.4	D630033O11Rik	chr9	lncRNA	RIKEN cDNA D630033O11 gene
chr9	43175759	43176613	+	43171356	43176613	A5SS	0.33	50	50	ENSMUST00000179013.4	ENSMUSG00000095385.4	D630033O11Rik	chr9	lncRNA	RIKEN cDNA D630033O11 gene
chr9	43182282	43191151	+	43176783	43191151	A5SS	0.33	50	50	ENSMUST00000179013.4	ENSMUSG00000095385.4	D630033O11Rik	chr9	lncRNA	RIKEN cDNA D630033O11 gene
chr9	43185652	43191151	+	43176783	43191151	A5SS	0.33	50	50	ENSMUST00000179013.4	ENSMUSG00000095385.4	D630033O11Rik	chr9	lncRNA	RIKEN cDNA D630033O11 gene
chr9	43185652	43191151	+	43182282	43191151	A5SS	0.33	50	50	ENSMUST00000209461.2	ENSMUSG00000095385.4	D630033O11Rik	chr9	lncRNA	RIKEN cDNA D630033O11 gene
chr9	43230468	43230623	+	43222976	43230623	A5SS	0.5	50	50	ENSMUST00000034511.7	ENSMUSG00000032013.7	Trim29	chr9	protein_coding	tripartite motif-containing 29
chr9	43425425	43426071	-	43425430	43426071	A3SS	0.5	50	50	ENSMUST00000216660.2	ENSMUSG00000111110.2	Gm36855	chr9	lncRNA	predicted gene, 36855
chr9	43519538;43529940	43529833;43531352	+	43519538;43526836	43526740;43531352	MXE	0.5	100	100	ENSMUST00000215154.2	ENSMUSG00000110988.2	Gm29909	chr9	lncRNA	predicted gene, 29909
chr9	43554455	43555172	-	43554401	43555172	A3SS	0.5	50	50	ENSMUST00000215431.2	ENSMUSG00000111400.2	Gm29961	chr9	lncRNA	predicted gene, 29961
chr9	43629660	43648181	-	43629660	43632180	5pMXE	0.5	50	50	ENSMUST00000216983.2	ENSMUSG00000111334.2	Gm30015	chr9	lncRNA	predicted gene, 30015
chr9	43635121	43648181	-	43629660	43648181	A3SS	0.5	50	50	ENSMUST00000216604.2	ENSMUSG00000111334.2	Gm30015	chr9	lncRNA	predicted gene, 30015
chr9	43650955	43656613	-	43648275	43656613	A3SS	0.5	50	50	ENSMUST00000216604.2	ENSMUSG00000111334.2	Gm30015	chr9	lncRNA	predicted gene, 30015
chr9	43705538	43741258	+	43705538	43714769	3pMXE	0.5	50	50	ENSMUST00000034510.9	ENSMUSG00000032012.10	Nectin1	chr9	protein_coding	nectin cell adhesion molecule 1
chr9	43734200	43742666	+	43741405	43742666	A5SS&ES	0.5	50	50	ENSMUST00000239313.2	ENSMUSG00000032012.10	Nectin1	chr9	protein_coding	nectin cell adhesion molecule 1
chr9	43876452	43881297	-	43852154	43881297	A3SS	0.5	50	50	ENSMUST00000215774.2	ENSMUSG00000111758.2	Gm30373	chr9	lncRNA	predicted gene, 30373
chr9	43957315	43957855	+	43957315	43957911	A3SS	0.33	50	50	ENSMUST00000114840.2	ENSMUSG00000032011.6	Thy1	chr9	protein_coding	thymus cell antigen 1, theta
chr9	43957315	43957919	+	43957315	43957911	A3SS	0.33	50	50	ENSMUST00000114840.2	ENSMUSG00000032011.6	Thy1	chr9	protein_coding	thymus cell antigen 1, theta
chr9	43955150	43957254	+	43954773	43957254	A5SS	0.5	50	50	ENSMUST00000114840.2	ENSMUSG00000032011.6	Thy1	chr9	protein_coding	thymus cell antigen 1, theta
chr9	43957315	43957855	+	43957315	43957919	A3SS	0.33	50	50	ENSMUST00000215156.2	ENSMUSG00000032011.6	Thy1	chr9	protein_coding	thymus cell antigen 1, theta
chr9	44007490	44022739	-	43978528	44022739	A3SS	0.33	50	50	ENSMUST00000162126.8	ENSMUSG00000111409.2	Gm49380	chr9	protein_coding	predicted gene, 49380
chr9	44009891	44022739	-	43978528	44022739	A3SS	0.33	50	50	ENSMUST00000162126.8	ENSMUSG00000111409.2	Gm49380	chr9	protein_coding	predicted gene, 49380
chr9	43978528	43982312	-	43978528	44022739	A5SS	0.5	50	50	ENSMUST00000162126.8	ENSMUSG00000111409.2	Gm49380	chr9	protein_coding	predicted gene, 49380
chr9	43978517;43979592	43979335;43986663	+	43978517	43986663	cassetteExon	0.5	100	100	ENSMUST00000034508.14	ENSMUSG00000032010.16	Usp2	chr9	protein_coding	ubiquitin specific peptidase 2
chr9	43980828	43986663	+	43978517	43986663	A5SS	0.25	50	50	ENSMUST00000034508.14	ENSMUSG00000032010.16	Usp2	chr9	protein_coding	ubiquitin specific peptidase 2
chr9	43983594	43986663	+	43978517	43986663	A5SS	0.25	50	50	ENSMUST00000034508.14	ENSMUSG00000032010.16	Usp2	chr9	protein_coding	ubiquitin specific peptidase 2
chr9	43996632	44000429	+	43987519	44000429	A5SS	0.33	50	50	ENSMUST00000034508.14	ENSMUSG00000032010.16	Usp2	chr9	protein_coding	ubiquitin specific peptidase 2
chr9	43998562	44000429	+	43987519	44000429	A5SS	0.33	50	50	ENSMUST00000034508.14	ENSMUSG00000032010.16	Usp2	chr9	protein_coding	ubiquitin specific peptidase 2
chr9	43980828	43986663	+	43979592	43986663	A5SS	0.25	50	50	ENSMUST00000177054.8	ENSMUSG00000032010.16	Usp2	chr9	protein_coding	ubiquitin specific peptidase 2
chr9	43983594	43986663	+	43979592	43986663	A5SS	0.25	50	50	ENSMUST00000177054.8	ENSMUSG00000032010.16	Usp2	chr9	protein_coding	ubiquitin specific peptidase 2
chr9	43983594	43986663	+	43980828	43986663	A5SS	0.25	50	50	ENSMUST00000114830.9	ENSMUSG00000032010.16	Usp2	chr9	protein_coding	ubiquitin specific peptidase 2
chr9	43996632	44000438	+	43996632	44000429	A3SS	0.5	50	50	ENSMUST00000065461.9	ENSMUSG00000032010.16	Usp2	chr9	protein_coding	ubiquitin specific peptidase 2
chr9	43998562	44000429	+	43996632	44000429	A5SS	0.33	50	50	ENSMUST00000065461.9	ENSMUSG00000032010.16	Usp2	chr9	protein_coding	ubiquitin specific peptidase 2
chr9	44007490	44022739	-	44007490;44009891	44009698;44022739	ES	0.5	50	50	ENSMUST00000065379.5	ENSMUSG00000053128.16	Rnf26	chr9	protein_coding	ring finger protein 26
chr9	44007490	44014239	-	44007490	44009698	A5SS&ES	0.33	50	50	ENSMUST00000065379.5	ENSMUSG00000053128.16	Rnf26	chr9	protein_coding	ring finger protein 26
chr9	44007490	44014239	-	44007490	44022739	A5SS	0.33	50	50	ENSMUST00000160985.2	ENSMUSG00000053128.16	Rnf26	chr9	protein_coding	ring finger protein 26
chr9	44013243	44013548	+	44013243;44013433	44013331;44013548	ES	0.5	50	50	ENSMUST00000034654.9	ENSMUSG00000034739.18	Mfrp	chr9	protein_coding	membrane frizzled-related protein
chr9	44016812	44017540	+	44016812;44017456	44017329;44017540	ES	0.5	50	50	ENSMUST00000034654.9	ENSMUSG00000034739.18	Mfrp	chr9	protein_coding	membrane frizzled-related protein
chr9	44016597	44016684	+	44016597	44016702	A3SS	0.5	50	50	ENSMUST00000034654.9	ENSMUSG00000034739.18	Mfrp	chr9	protein_coding	membrane frizzled-related protein
chr9	44016579	44016702	+	44016597	44016702	A5SS	0.5	50	50	ENSMUST00000034654.9	ENSMUSG00000034739.18	Mfrp	chr9	protein_coding	membrane frizzled-related protein
chr9	44018758	44019592	+	44019268	44019592	A5SS	0.5	50	50	ENSMUST00000034654.9	ENSMUSG00000034739.18	Mfrp	chr9	protein_coding	membrane frizzled-related protein
chr9	44014880	44014991	+	44014880	44016449	A3SS	0.5	50	50	ENSMUST00000161703.8	ENSMUSG00000034739.18	Mfrp	chr9	protein_coding	membrane frizzled-related protein
chr9	44016579	44016702	+	44016579	44016684	A3SS	0.5	50	50	ENSMUST00000161703.8	ENSMUSG00000034739.18	Mfrp	chr9	protein_coding	membrane frizzled-related protein
chr9	44016026	44016449	+	44014880	44016449	A5SS	0.5	50	50	ENSMUST00000161703.8	ENSMUSG00000034739.18	Mfrp	chr9	protein_coding	membrane frizzled-related protein
chr9	44016597	44016684	+	44016579	44016684	A5SS	0.5	50	50	ENSMUST00000161703.8	ENSMUSG00000034739.18	Mfrp	chr9	protein_coding	membrane frizzled-related protein
chr9	44018758	44019592	+	44018758;44019268	44019010;44019592	ES	0.5	50	50	ENSMUST00000206308.2	ENSMUSG00000034739.18	Mfrp	chr9	protein_coding	membrane frizzled-related protein
chr9	44018758	44019003	+	44018758	44019010	A3SS	0.33	50	50	ENSMUST00000206308.2	ENSMUSG00000034739.18	Mfrp	chr9	protein_coding	membrane frizzled-related protein
chr9	44018669	44019003	+	44018641	44019003	A5SS	0.2	50	50	ENSMUST00000114816.8	ENSMUSG00000079592.10	C1qtnf5	chr9	protein_coding	C1q and tumor necrosis factor related protein 5
chr9	44018675	44019003	+	44018641	44019003	A5SS	0.2	50	50	ENSMUST00000114816.8	ENSMUSG00000079592.10	C1qtnf5	chr9	protein_coding	C1q and tumor necrosis factor related protein 5
chr9	44018758	44019003	+	44018641	44019003	A5SS	0.2	50	50	ENSMUST00000114816.8	ENSMUSG00000079592.10	C1qtnf5	chr9	protein_coding	C1q and tumor necrosis factor related protein 5
chr9	44018780	44019003	+	44018641	44019003	A5SS	0.2	50	50	ENSMUST00000114816.8	ENSMUSG00000079592.10	C1qtnf5	chr9	protein_coding	C1q and tumor necrosis factor related protein 5
chr9	44018758	44019592	+	44018758;44019268	44019003;44019592	ES	0.5	50	50	ENSMUST00000114821.9	ENSMUSG00000079592.10	C1qtnf5	chr9	protein_coding	C1q and tumor necrosis factor related protein 5
chr9	44018669	44019003	+	44018758	44019003	A5SS	0.2	50	50	ENSMUST00000114821.9	ENSMUSG00000079592.10	C1qtnf5	chr9	protein_coding	C1q and tumor necrosis factor related protein 5
chr9	44018675	44019003	+	44018758	44019003	A5SS	0.2	50	50	ENSMUST00000114821.9	ENSMUSG00000079592.10	C1qtnf5	chr9	protein_coding	C1q and tumor necrosis factor related protein 5
chr9	44018780	44019003	+	44018758	44019003	A5SS	0.2	50	50	ENSMUST00000114821.9	ENSMUSG00000079592.10	C1qtnf5	chr9	protein_coding	C1q and tumor necrosis factor related protein 5
chr9	44018669	44019003	+	44018780	44019003	A5SS	0.2	50	50	ENSMUST00000152956.8	ENSMUSG00000079592.10	C1qtnf5	chr9	protein_coding	C1q and tumor necrosis factor related protein 5
chr9	44018675	44019003	+	44018780	44019003	A5SS	0.2	50	50	ENSMUST00000152956.8	ENSMUSG00000079592.10	C1qtnf5	chr9	protein_coding	C1q and tumor necrosis factor related protein 5
chr9	44018675	44019003	+	44018669	44019003	A5SS	0.2	50	50	ENSMUST00000114815.3	ENSMUSG00000079592.10	C1qtnf5	chr9	protein_coding	C1q and tumor necrosis factor related protein 5
chr9	44029559	44031420	+	44024532	44031420	A5SS	0.5	50	50	ENSMUST00000181106.3	ENSMUSG00000097467.3	Gm26737	chr9	lncRNA	predicted gene, 26737
chr9	44046053	44047815	+	44046053;44046572	44046398;44047815	ES	0.5	50	50	ENSMUST00000149241.8	ENSMUSG00000032135.16	Mcam	chr9	protein_coding	melanoma cell adhesion molecule
chr9	44046053	44047824	+	44046053	44046398	A3SS&ES	0.33	50	50	ENSMUST00000149241.8	ENSMUSG00000032135.16	Mcam	chr9	protein_coding	melanoma cell adhesion molecule
chr9	44052289	44053081	+	44052289;44052689	44052572;44053081	ES	0.5	50	50	ENSMUST00000034650.15	ENSMUSG00000032135.16	Mcam	chr9	protein_coding	melanoma cell adhesion molecule
chr9	44046053	44047824	+	44046053	44047815	A3SS	0.33	50	50	ENSMUST00000034650.15	ENSMUSG00000032135.16	Mcam	chr9	protein_coding	melanoma cell adhesion molecule
chr9	44070188	44074636	-	44070188;44070405	44070274;44074636	ES	0.33	50	50	ENSMUST00000206720.2	ENSMUSG00000034342.10	Cbl	chr9	protein_coding	Casitas B-lineage lymphoma
chr9	44064425	44065058	-	44064265	44065058	A3SS	0.5	50	50	ENSMUST00000206720.2	ENSMUSG00000034342.10	Cbl	chr9	protein_coding	Casitas B-lineage lymphoma
chr9	44071666	44074636	-	44070405	44074636	A3SS	0.33	50	50	ENSMUST00000206720.2	ENSMUSG00000034342.10	Cbl	chr9	protein_coding	Casitas B-lineage lymphoma
chr9	44075503	44076099	-	44075554	44076099	A3SS	0.5	50	50	ENSMUST00000206720.2	ENSMUSG00000034342.10	Cbl	chr9	protein_coding	Casitas B-lineage lymphoma
chr9	44084696	44097124	-	44084696	44112257	A5SS	0.5	50	50	ENSMUST00000206720.2	ENSMUSG00000034342.10	Cbl	chr9	protein_coding	Casitas B-lineage lymphoma
chr9	44112504	44144658	-	44112504	44144997	A5SS	0.5	50	50	ENSMUST00000206720.2	ENSMUSG00000034342.10	Cbl	chr9	protein_coding	Casitas B-lineage lymphoma
chr9	44071666	44074636	-	44070188	44074636	A3SS	0.33	50	50	ENSMUST00000037644.8	ENSMUSG00000034342.10	Cbl	chr9	protein_coding	Casitas B-lineage lymphoma
chr9	44152373	44154311	+	44152373	44152919	3pMXE	0.5	50	50	ENSMUST00000216995.2	ENSMUSG00000070306.4	Ccdc153	chr9	protein_coding	coiled-coil domain containing 153
chr9	44152020	44152295	+	44152020	44152279	A3SS	0.5	50	50	ENSMUST00000216995.2	ENSMUSG00000070306.4	Ccdc153	chr9	protein_coding	coiled-coil domain containing 153
chr9	44152373	44154311	+	44152373;44152984	44152919;44154311	ES	0.5	50	50	ENSMUST00000092426.5	ENSMUSG00000070306.4	Ccdc153	chr9	protein_coding	coiled-coil domain containing 153
chr9	44152984	44154869	+	44152984;44154430	44154311;44154869	ES	0.5	50	50	ENSMUST00000092426.5	ENSMUSG00000070306.4	Ccdc153	chr9	protein_coding	coiled-coil domain containing 153
chr9	44157139	44158033	+	44157139	44158054	A3SS	0.5	50	50	ENSMUST00000092426.5	ENSMUSG00000070306.4	Ccdc153	chr9	protein_coding	coiled-coil domain containing 153
chr9	44152373;44152984	44152919;44154869	+	44152373;44154430	44154311;44154869	MXE	0.5	100	100	ENSMUST00000217221.2	ENSMUSG00000070306.4	Ccdc153	chr9	protein_coding	coiled-coil domain containing 153
chr9	44152373	44154311	+	44152984	44154311	5pMXE	0.5	50	50	ENSMUST00000215711.2	ENSMUSG00000070306.4	Ccdc153	chr9	protein_coding	coiled-coil domain containing 153
chr9	44161040	44161140	-	44161044	44161140	A3SS	0.5	50	50	ENSMUST00000034618.6	ENSMUSG00000032105.6	Pdzd3	chr9	protein_coding	PDZ domain containing 3
chr9	44177162	44179798	-	44177162	44179601	5pMXE	0.25	50	50	ENSMUST00000034621.16	ENSMUSG00000032109.16	Nlrx1	chr9	protein_coding	NLR family member X1
chr9	44177162	44177721	-	44177162	44179601	A5SS	0.25	50	50	ENSMUST00000034621.16	ENSMUSG00000032109.16	Nlrx1	chr9	protein_coding	NLR family member X1
chr9	44177162	44179277	-	44177162	44179601	A5SS	0.25	50	50	ENSMUST00000034621.16	ENSMUSG00000032109.16	Nlrx1	chr9	protein_coding	NLR family member X1
chr9	44177162	44179277	-	44177154	44179277	A3SS	0.5	50	50	ENSMUST00000169651.3	ENSMUSG00000032109.16	Nlrx1	chr9	protein_coding	NLR family member X1
chr9	44177162	44177721	-	44177162	44179798	A5SS	0.25	50	50	ENSMUST00000168499.9	ENSMUSG00000032109.16	Nlrx1	chr9	protein_coding	NLR family member X1
chr9	44177162	44179277	-	44177162	44179798	A5SS	0.25	50	50	ENSMUST00000168499.9	ENSMUSG00000032109.16	Nlrx1	chr9	protein_coding	NLR family member X1
chr9	44177162	44177721	-	44177162	44179277	A5SS	0.25	50	50	ENSMUST00000213764.2	ENSMUSG00000032109.16	Nlrx1	chr9	protein_coding	NLR family member X1
chr9	44188394	44188755	-	44186705	44188755	A3SS	0.5	50	50	ENSMUST00000159385.8	ENSMUSG00000032131.17	Abcg4	chr9	protein_coding	ATP binding cassette subfamily G member 4
chr9	44189427	44190600	-	44189427;44190411	44190269;44190600	ES	0.5	50	50	ENSMUST00000034648.16	ENSMUSG00000032131.17	Abcg4	chr9	protein_coding	ATP binding cassette subfamily G member 4
chr9	44198776	44199311	-	44198762	44199311	A3SS	0.5	50	50	ENSMUST00000161354.9	ENSMUSG00000032131.17	Abcg4	chr9	protein_coding	ATP binding cassette subfamily G member 4
chr9	44198762	44199303	-	44198762	44199311	A5SS	0.5	50	50	ENSMUST00000161354.9	ENSMUSG00000032131.17	Abcg4	chr9	protein_coding	ATP binding cassette subfamily G member 4
chr9	44213884;44216145	44216079;44216913	-	44213884	44216913	cassetteExon	0.5	100	100	ENSMUST00000216508.2	ENSMUSG00000032119.6	Hinfp	chr9	protein_coding	histone H4 transcription factor
chr9	44214069	44216913	-	44213884	44216913	A3SS	0.33	50	50	ENSMUST00000216508.2	ENSMUSG00000032119.6	Hinfp	chr9	protein_coding	histone H4 transcription factor
chr9	44209708	44209869	-	44209708	44210170	A5SS	0.5	50	50	ENSMUST00000216508.2	ENSMUSG00000032119.6	Hinfp	chr9	protein_coding	histone H4 transcription factor
chr9	44216145	44216913	-	44214069	44216913	A3SS	0.33	50	50	ENSMUST00000034629.6	ENSMUSG00000032119.6	Hinfp	chr9	protein_coding	histone H4 transcription factor
chr9	44222608	44224803	-	44222564	44224803	A3SS	0.5	50	50	ENSMUST00000065080.10	ENSMUSG00000032120.12	C2cd2l	chr9	protein_coding	C2 calcium-dependent domain containing 2-like
chr9	44225311	44225452	-	44225308	44225452	A3SS	0.5	50	50	ENSMUST00000065080.10	ENSMUSG00000032120.12	C2cd2l	chr9	protein_coding	C2 calcium-dependent domain containing 2-like
chr9	44238502	44239250	+	44238502;44238969	44238849;44239250	ES	0.5	50	50	ENSMUST00000215248.2	ENSMUSG00000032123.6	Dpagt1	chr9	protein_coding	dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)
chr9	44238116	44238443	+	44237492	44238443	A5SS	0.5	50	50	ENSMUST00000215248.2	ENSMUSG00000032123.6	Dpagt1	chr9	protein_coding	dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)
chr9	44240434	44240709	+	44240434	44242415	A3SS	0.5	50	50	ENSMUST00000213461.2	ENSMUSG00000032123.6	Dpagt1	chr9	protein_coding	dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)
chr9	44252561	44253315	-	44252561;44252995	44252923;44253315	ES	0.5	50	50	ENSMUST00000077353.15	ENSMUSG00000032126.17	Hmbs	chr9	protein_coding	hydroxymethylbilane synthase
chr9	44253368	44253518	-	44253368	44255307	A5SS	0.5	50	50	ENSMUST00000077353.15	ENSMUSG00000032126.17	Hmbs	chr9	protein_coding	hydroxymethylbilane synthase
chr9	44267750	44269366	-	44267726	44269366	A3SS	0.5	50	50	ENSMUST00000034644.10	ENSMUSG00000032127.10	Vps11	chr9	protein_coding	VPS11, CORVET/HOPS core subunit
chr9	44267147	44267592	-	44267147	44267525	A5SS	0.5	50	50	ENSMUST00000034644.10	ENSMUSG00000032127.10	Vps11	chr9	protein_coding	VPS11, CORVET/HOPS core subunit
chr9	44290973	44291810	+	44290892	44291810	A5SS	0.25	50	50	ENSMUST00000066601.13	ENSMUSG00000032115.15	Hyou1	chr9	protein_coding	hypoxia up-regulated 1
chr9	44291038	44291810	+	44290892	44291810	A5SS	0.25	50	50	ENSMUST00000066601.13	ENSMUSG00000032115.15	Hyou1	chr9	protein_coding	hypoxia up-regulated 1
chr9	44291234	44291810	+	44290892	44291810	A5SS	0.25	50	50	ENSMUST00000066601.13	ENSMUSG00000032115.15	Hyou1	chr9	protein_coding	hypoxia up-regulated 1
chr9	44296568	44296864	+	44296602	44296864	A5SS	0.33	50	50	ENSMUST00000066601.13	ENSMUSG00000032115.15	Hyou1	chr9	protein_coding	hypoxia up-regulated 1
chr9	44292887	44293139	+	44292887	44296864	A3SS	0.5	50	50	ENSMUST00000162560.8	ENSMUSG00000032115.15	Hyou1	chr9	protein_coding	hypoxia up-regulated 1
chr9	44296568	44296864	+	44292887	44296864	A5SS	0.33	50	50	ENSMUST00000162560.8	ENSMUSG00000032115.15	Hyou1	chr9	protein_coding	hypoxia up-regulated 1
chr9	44296602	44296864	+	44292887	44296864	A5SS	0.33	50	50	ENSMUST00000162560.8	ENSMUSG00000032115.15	Hyou1	chr9	protein_coding	hypoxia up-regulated 1
chr9	44290973	44291810	+	44291038	44291810	A5SS	0.25	50	50	ENSMUST00000161318.8	ENSMUSG00000032115.15	Hyou1	chr9	protein_coding	hypoxia up-regulated 1
chr9	44291234	44291810	+	44291038	44291810	A5SS	0.25	50	50	ENSMUST00000161318.8	ENSMUSG00000032115.15	Hyou1	chr9	protein_coding	hypoxia up-regulated 1
chr9	44291234	44291810	+	44290973	44291810	A5SS	0.25	50	50	ENSMUST00000217019.2	ENSMUSG00000032115.15	Hyou1	chr9	protein_coding	hypoxia up-regulated 1
chr9	44312831;44313066	44313004;44313370	+	44312831	44313370	cassetteExon	0.5	100	100	ENSMUST00000215420.2	ENSMUSG00000032114.10	Slc37a4	chr9	protein_coding	solute carrier family 37 (glucose-6-phosphate transporter), member 4
chr9	44309918	44310515	+	44309918	44310546	A3SS	0.5	50	50	ENSMUST00000215420.2	ENSMUSG00000032114.10	Slc37a4	chr9	protein_coding	solute carrier family 37 (glucose-6-phosphate transporter), member 4
chr9	44308743	44309565	+	44308288	44309565	A5SS	0.33	50	50	ENSMUST00000215420.2	ENSMUSG00000032114.10	Slc37a4	chr9	protein_coding	solute carrier family 37 (glucose-6-phosphate transporter), member 4
chr9	44308770	44309565	+	44308288	44309565	A5SS	0.33	50	50	ENSMUST00000215420.2	ENSMUSG00000032114.10	Slc37a4	chr9	protein_coding	solute carrier family 37 (glucose-6-phosphate transporter), member 4
chr9	44308743	44309565	+	44308770	44309565	A5SS	0.33	50	50	ENSMUST00000215121.2	ENSMUSG00000032114.10	Slc37a4	chr9	protein_coding	solute carrier family 37 (glucose-6-phosphate transporter), member 4
chr9	44315757	44318101	-	44315757;44316643	44316540;44318101	ES	0.5	50	50	ENSMUST00000213747.2	ENSMUSG00000032112.11	Trappc4	chr9	protein_coding	trafficking protein particle complex 4
chr9	44318275	44318582	-	44318275	44318424	A5SS	0.5	50	50	ENSMUST00000034623.8	ENSMUSG00000032112.11	Trappc4	chr9	protein_coding	trafficking protein particle complex 4
chr9	44315757	44318101	-	44316643	44318101	3pMXE	0.5	50	50	ENSMUST00000215072.2	ENSMUSG00000032112.11	Trappc4	chr9	protein_coding	trafficking protein particle complex 4
chr9	44319054	44319983	+	44319054;44319380	44319285;44319983	ES	0.5	50	50	ENSMUST00000080300.9	ENSMUSG00000009927.10	Rps25	chr9	protein_coding	ribosomal protein S25
chr9	44319054	44319983	+	44319054	44319285	3pMXE	0.5	50	50	ENSMUST00000217231.2	ENSMUSG00000009927.10	Rps25	chr9	protein_coding	ribosomal protein S25
chr9	44319054	44319983	+	44319380	44319983	A5SS	0.5	50	50	ENSMUST00000215610.2	ENSMUSG00000009927.10	Rps25	chr9	protein_coding	ribosomal protein S25
chr9	44324311	44324434	-	44324319	44324434	A3SS	0.25	50	50	ENSMUST00000053286.9	ENSMUSG00000043923.9	Ccdc84	chr9	protein_coding	coiled-coil domain containing 84
chr9	44324340	44324434	-	44324319	44324434	A3SS	0.25	50	50	ENSMUST00000053286.9	ENSMUSG00000043923.9	Ccdc84	chr9	protein_coding	coiled-coil domain containing 84
chr9	44324363	44324434	-	44324319	44324434	A3SS	0.25	50	50	ENSMUST00000053286.9	ENSMUSG00000043923.9	Ccdc84	chr9	protein_coding	coiled-coil domain containing 84
chr9	44324498	44324740	-	44324498	44324768	A5SS	0.5	50	50	ENSMUST00000053286.9	ENSMUSG00000043923.9	Ccdc84	chr9	protein_coding	coiled-coil domain containing 84
chr9	44324830	44324916	-	44324830	44324904	A5SS	0.5	50	50	ENSMUST00000053286.9	ENSMUSG00000043923.9	Ccdc84	chr9	protein_coding	coiled-coil domain containing 84
chr9	44324311	44324434	-	44324340	44324434	A3SS	0.25	50	50	ENSMUST00000214494.2	ENSMUSG00000043923.9	Ccdc84	chr9	protein_coding	coiled-coil domain containing 84
chr9	44324363	44324434	-	44324340	44324434	A3SS	0.25	50	50	ENSMUST00000214494.2	ENSMUSG00000043923.9	Ccdc84	chr9	protein_coding	coiled-coil domain containing 84
chr9	44324311	44324434	-	44324363	44324434	A3SS	0.25	50	50	ENSMUST00000214748.2	ENSMUSG00000043923.9	Ccdc84	chr9	protein_coding	coiled-coil domain containing 84
chr9	44346606	44346720	-	44345320	44346720	A3SS	0.5	50	50	ENSMUST00000215375.3	ENSMUSG00000074397.6	Foxr1	chr9	protein_coding	forkhead box R1
chr9	44346949	44347156	-	44346878	44347156	A3SS	0.5	50	50	ENSMUST00000215375.3	ENSMUSG00000074397.6	Foxr1	chr9	protein_coding	forkhead box R1
chr9	44379811;44380072	44379914;44381343	+	44379811	44381343	cassetteExon	0.5	100	100	ENSMUST00000213746.2	ENSMUSG00000060380.4	C030014I23Rik	chr9	lncRNA	RIKEN cDNA C030014I23 gene
chr9	44382248;44384796	44384657;44388792	+	44382248	44388792	cassetteExon	0.5	100	100	ENSMUST00000213746.2	ENSMUSG00000060380.4	C030014I23Rik	chr9	lncRNA	RIKEN cDNA C030014I23 gene
chr9	44390708	44392842	+	44388967	44392842	A5SS	0.5	50	50	ENSMUST00000213746.2	ENSMUSG00000060380.4	C030014I23Rik	chr9	lncRNA	RIKEN cDNA C030014I23 gene
chr9	44394783	44400952	+	44394783	44412042	A3SS	0.5	50	50	ENSMUST00000220303.2	ENSMUSG00000063382.7	Bcl9l	chr9	protein_coding	B cell CLL/lymphoma 9-like
chr9	44410846	44412042	+	44394783	44412042	A5SS	0.5	50	50	ENSMUST00000220303.2	ENSMUSG00000063382.7	Bcl9l	chr9	protein_coding	B cell CLL/lymphoma 9-like
chr9	44398583	44400952	+	44394783	44400952	A5SS	0.5	50	50	ENSMUST00000217898.2	ENSMUSG00000063382.7	Bcl9l	chr9	protein_coding	B cell CLL/lymphoma 9-like
chr9	44409856	44410745	+	44401008	44410745	A5SS	0.33	50	50	ENSMUST00000217898.2	ENSMUSG00000063382.7	Bcl9l	chr9	protein_coding	B cell CLL/lymphoma 9-like
chr9	44410570	44410745	+	44401008	44410745	A5SS	0.33	50	50	ENSMUST00000217898.2	ENSMUSG00000063382.7	Bcl9l	chr9	protein_coding	B cell CLL/lymphoma 9-like
chr9	44410570	44410745	+	44409856	44410745	A5SS	0.33	50	50	ENSMUST00000220292.2	ENSMUSG00000063382.7	Bcl9l	chr9	protein_coding	B cell CLL/lymphoma 9-like
chr9	44466832	44467498	-	44437737	44467498	A3SS	0.5	50	50	ENSMUST00000215293.2	ENSMUSG00000047880.16	Cxcr5	chr9	protein_coding	chemokine (C-X-C motif) receptor 5
chr9	44516249	44518420	+	44516281	44518420	A5SS	0.5	50	50	ENSMUST00000170489.2	ENSMUSG00000032097.11	Ddx6	chr9	protein_coding	DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
chr9	44582570	44583337	-	44582570	44583439	A5SS	0.5	50	50	ENSMUST00000213859.2	ENSMUSG00000110755.2	BC049987	chr9	lncRNA	cDNA sequence BC049987
chr9	44592890	44594166	+	44592890;44594029	44593929;44594166	ES	0.5	50	50	ENSMUST00000034609.11	ENSMUSG00000032098.14	Treh	chr9	protein_coding	trehalase (brush-border membrane glycoprotein)
chr9	44595256	44596232	+	44595256;44596022	44595805;44596232	ES	0.5	50	50	ENSMUST00000034609.11	ENSMUSG00000032098.14	Treh	chr9	protein_coding	trehalase (brush-border membrane glycoprotein)
chr9	44584637	44592361	+	44584637	44592357	A3SS	0.5	50	50	ENSMUST00000034609.11	ENSMUSG00000032098.14	Treh	chr9	protein_coding	trehalase (brush-border membrane glycoprotein)
chr9	44598995	44599914	-	44598995;44599753	44599721;44599914	ES	0.5	50	50	ENSMUST00000147495.8	ENSMUSG00000048537.17	Phldb1	chr9	protein_coding	pleckstrin homology like domain, family B, member 1
chr9	44610993	44615100	-	44610993;44612383	44612243;44615100	ES	0.33	50	50	ENSMUST00000147495.8	ENSMUSG00000048537.17	Phldb1	chr9	protein_coding	pleckstrin homology like domain, family B, member 1
chr9	44609517;44610168	44610124;44610644	-	44609517	44610644	cassetteExon	0.5	100	100	ENSMUST00000147495.8	ENSMUSG00000048537.17	Phldb1	chr9	protein_coding	pleckstrin homology like domain, family B, member 1
chr9	44612383;44612967	44612800;44615100	-	44612383	44615100	cassetteExon	0.5	100	100	ENSMUST00000147495.8	ENSMUSG00000048537.17	Phldb1	chr9	protein_coding	pleckstrin homology like domain, family B, member 1
chr9	44619337;44619819	44619580;44622220	-	44619337	44622220	cassetteExon	0.5	100	100	ENSMUST00000147495.8	ENSMUSG00000048537.17	Phldb1	chr9	protein_coding	pleckstrin homology like domain, family B, member 1
chr9	44619337;44619819	44619691;44622220	-	44619337	44622220	cassetteExon	0.5	100	100	ENSMUST00000147495.8	ENSMUSG00000048537.17	Phldb1	chr9	protein_coding	pleckstrin homology like domain, family B, member 1
chr9	44607480	44609016	-	44607480	44609049	A5SS	0.5	50	50	ENSMUST00000147495.8	ENSMUSG00000048537.17	Phldb1	chr9	protein_coding	pleckstrin homology like domain, family B, member 1
chr9	44623219	44624470	-	44623219	44626611	A5SS	0.5	50	50	ENSMUST00000147495.8	ENSMUSG00000048537.17	Phldb1	chr9	protein_coding	pleckstrin homology like domain, family B, member 1
chr9	44629696	44632551	-	44629696	44637307	A5SS	0.33	50	50	ENSMUST00000147495.8	ENSMUSG00000048537.17	Phldb1	chr9	protein_coding	pleckstrin homology like domain, family B, member 1
chr9	44629696	44632567	-	44629696	44637307	A5SS	0.33	50	50	ENSMUST00000147495.8	ENSMUSG00000048537.17	Phldb1	chr9	protein_coding	pleckstrin homology like domain, family B, member 1
chr9	44637477	44637573	-	44637477	44638348	A5SS	0.5	50	50	ENSMUST00000147495.8	ENSMUSG00000048537.17	Phldb1	chr9	protein_coding	pleckstrin homology like domain, family B, member 1
chr9	44612967	44615100	-	44610993	44615100	A3SS	0.33	50	50	ENSMUST00000144251.8	ENSMUSG00000048537.17	Phldb1	chr9	protein_coding	pleckstrin homology like domain, family B, member 1
chr9	44619337	44619580	-	44619337	44619691	A5SS	0.33	50	50	ENSMUST00000144251.8	ENSMUSG00000048537.17	Phldb1	chr9	protein_coding	pleckstrin homology like domain, family B, member 1
chr9	44612383	44615100	-	44612383	44612800	5pMXE	0.5	50	50	ENSMUST00000135436.8	ENSMUSG00000048537.17	Phldb1	chr9	protein_coding	pleckstrin homology like domain, family B, member 1
chr9	44619337	44622220	-	44619337	44619580	5pMXE	0.33	50	50	ENSMUST00000123123.2	ENSMUSG00000048537.17	Phldb1	chr9	protein_coding	pleckstrin homology like domain, family B, member 1
chr9	44629696	44632551	-	44629696	44632567	A5SS	0.33	50	50	ENSMUST00000123406.8	ENSMUSG00000048537.17	Phldb1	chr9	protein_coding	pleckstrin homology like domain, family B, member 1
chr9	44667380	44668417	-	44663572	44668417	A3SS	0.5	50	50	ENSMUST00000034607.10	ENSMUSG00000032096.17	Arcn1	chr9	protein_coding	archain 1
chr9	44685081	44693397	+	44685081;44689935	44689859;44693397	ES	0.5	50	50	ENSMUST00000154090.8	ENSMUSG00000002031.14	Ift46	chr9	protein_coding	intraflagellar transport 46
chr9	44685081;44685528	44685480;44689859	+	44685081	44689859	cassetteExon	0.5	100	100	ENSMUST00000154090.8	ENSMUSG00000002031.14	Ift46	chr9	protein_coding	intraflagellar transport 46
chr9	44685081;44687734	44687654;44689859	+	44685081	44689859	cassetteExon	0.5	100	100	ENSMUST00000154090.8	ENSMUSG00000002031.14	Ift46	chr9	protein_coding	intraflagellar transport 46
chr9	44685081;44687758	44687654;44689859	+	44685081	44689859	cassetteExon	0.5	100	100	ENSMUST00000154090.8	ENSMUSG00000002031.14	Ift46	chr9	protein_coding	intraflagellar transport 46
chr9	44685081	44689891	+	44685081	44689859	A3SS	0.2	50	50	ENSMUST00000154090.8	ENSMUSG00000002031.14	Ift46	chr9	protein_coding	intraflagellar transport 46
chr9	44684584	44684985	+	44684470	44684985	A5SS	0.5	50	50	ENSMUST00000154090.8	ENSMUSG00000002031.14	Ift46	chr9	protein_coding	intraflagellar transport 46
chr9	44695102	44695629	+	44695102;44695350	44695257;44695629	ES	0.5	50	50	ENSMUST00000002099.11	ENSMUSG00000002031.14	Ift46	chr9	protein_coding	intraflagellar transport 46
chr9	44698201	44698456	+	44698201	44700864	A3SS	0.5	50	50	ENSMUST00000002099.11	ENSMUSG00000002031.14	Ift46	chr9	protein_coding	intraflagellar transport 46
chr9	44685081;44685528	44685480;44689859	+	44685081;44687758	44687654;44689859	MXE	0.5	100	100	ENSMUST00000128150.8	ENSMUSG00000002031.14	Ift46	chr9	protein_coding	intraflagellar transport 46
chr9	44685081	44689891	+	44685081	44687654	A3SS&ES	0.2	50	50	ENSMUST00000128150.8	ENSMUSG00000002031.14	Ift46	chr9	protein_coding	intraflagellar transport 46
chr9	44687734	44689859	+	44687758	44689859	A5SS	0.25	50	50	ENSMUST00000128150.8	ENSMUSG00000002031.14	Ift46	chr9	protein_coding	intraflagellar transport 46
chr9	44685081;44689935	44689891;44693397	+	44685081	44693397	cassetteExon	0.5	100	100	ENSMUST00000143654.8	ENSMUSG00000002031.14	Ift46	chr9	protein_coding	intraflagellar transport 46
chr9	44685081	44685480	+	44685081	44693397	A3SS	0.2	50	50	ENSMUST00000143654.8	ENSMUSG00000002031.14	Ift46	chr9	protein_coding	intraflagellar transport 46
chr9	44685081	44687654	+	44685081	44693397	A3SS	0.2	50	50	ENSMUST00000143654.8	ENSMUSG00000002031.14	Ift46	chr9	protein_coding	intraflagellar transport 46
chr9	44685081	44687654	+	44685081	44685480	3pMXE	0.2	50	50	ENSMUST00000124534.8	ENSMUSG00000002031.14	Ift46	chr9	protein_coding	intraflagellar transport 46
chr9	44685081	44689859	+	44685081	44685480	3pMXE	0.2	50	50	ENSMUST00000124534.8	ENSMUSG00000002031.14	Ift46	chr9	protein_coding	intraflagellar transport 46
chr9	44685081	44689891	+	44685081	44685480	3pMXE	0.2	50	50	ENSMUST00000124534.8	ENSMUSG00000002031.14	Ift46	chr9	protein_coding	intraflagellar transport 46
chr9	44685528	44689859	+	44685528;44687734	44687657;44689859	ES	0.25	50	50	ENSMUST00000125877.8	ENSMUSG00000002031.14	Ift46	chr9	protein_coding	intraflagellar transport 46
chr9	44695102	44695629	+	44695102	44695257	3pMXE	0.5	50	50	ENSMUST00000125877.8	ENSMUSG00000002031.14	Ift46	chr9	protein_coding	intraflagellar transport 46
chr9	44685081;44687734	44687654;44689859	+	44685081;44685528	44685480;44689859	MXE	0.5	100	100	ENSMUST00000151905.8	ENSMUSG00000002031.14	Ift46	chr9	protein_coding	intraflagellar transport 46
chr9	44685528;44687758	44687657;44689859	+	44685528	44689859	cassetteExon	0.5	100	100	ENSMUST00000151905.8	ENSMUSG00000002031.14	Ift46	chr9	protein_coding	intraflagellar transport 46
chr9	44685081	44689859	+	44687734	44689859	5pMXE	0.25	50	50	ENSMUST00000118186.2	ENSMUSG00000002031.14	Ift46	chr9	protein_coding	intraflagellar transport 46
chr9	44685528	44689859	+	44687734	44689859	5pMXE	0.25	50	50	ENSMUST00000118186.2	ENSMUSG00000002031.14	Ift46	chr9	protein_coding	intraflagellar transport 46
chr9	44685081	44693397	+	44689935	44693397	5pMXE	0.5	50	50	ENSMUST00000133167.2	ENSMUSG00000002031.14	Ift46	chr9	protein_coding	intraflagellar transport 46
chr9	44707009	44707621	-	44707009;44707424	44707293;44707621	ES	0.5	50	50	ENSMUST00000213203.2	ENSMUSG00000002032.18	Tmem25	chr9	protein_coding	transmembrane protein 25
chr9	44709760	44709961	-	44709729	44709961	A3SS	0.5	50	50	ENSMUST00000213203.2	ENSMUSG00000002032.18	Tmem25	chr9	protein_coding	transmembrane protein 25
chr9	44710054	44710478	-	44710057	44710478	A3SS	0.33	50	50	ENSMUST00000213203.2	ENSMUSG00000002032.18	Tmem25	chr9	protein_coding	transmembrane protein 25
chr9	44710095	44710478	-	44710057	44710478	A3SS	0.33	50	50	ENSMUST00000213203.2	ENSMUSG00000002032.18	Tmem25	chr9	protein_coding	transmembrane protein 25
chr9	44710057	44710379	-	44710057	44710478	A5SS	0.5	50	50	ENSMUST00000213203.2	ENSMUSG00000002032.18	Tmem25	chr9	protein_coding	transmembrane protein 25
chr9	44710095	44710478	-	44710054	44710478	A3SS	0.33	50	50	ENSMUST00000002100.8	ENSMUSG00000002032.18	Tmem25	chr9	protein_coding	transmembrane protein 25
chr9	44710054	44710327	-	44710054	44710478	A5SS	0.33	50	50	ENSMUST00000002100.8	ENSMUSG00000002032.18	Tmem25	chr9	protein_coding	transmembrane protein 25
chr9	44710054	44710379	-	44710054	44710478	A5SS	0.33	50	50	ENSMUST00000002100.8	ENSMUSG00000002032.18	Tmem25	chr9	protein_coding	transmembrane protein 25
chr9	44710054	44710379	-	44710057	44710379	A3SS	0.5	50	50	ENSMUST00000214833.2	ENSMUSG00000002032.18	Tmem25	chr9	protein_coding	transmembrane protein 25
chr9	44710054	44710327	-	44710054	44710379	A5SS	0.33	50	50	ENSMUST00000213363.2	ENSMUSG00000002032.18	Tmem25	chr9	protein_coding	transmembrane protein 25
chr9	44764304;44790101	44790003;44792147	-	44764304	44792147	cassetteExon	0.5	100	100	ENSMUST00000114689.8	ENSMUSG00000002028.14	Kmt2a	chr9	protein_coding	lysine (K)-specific methyltransferase 2A
chr9	44752377	44752860	-	44752381	44752860	A3SS	0.5	50	50	ENSMUST00000114689.8	ENSMUSG00000002028.14	Kmt2a	chr9	protein_coding	lysine (K)-specific methyltransferase 2A
chr9	44727956	44728902	-	44727956	44729003	A5SS	0.5	50	50	ENSMUST00000114689.8	ENSMUSG00000002028.14	Kmt2a	chr9	protein_coding	lysine (K)-specific methyltransferase 2A
chr9	44744342	44745204	-	44744342	44745195	A5SS	0.5	50	50	ENSMUST00000114689.8	ENSMUSG00000002028.14	Kmt2a	chr9	protein_coding	lysine (K)-specific methyltransferase 2A
chr9	44793230	44793785	+	44792581	44793785	A5SS	0.5	50	50	ENSMUST00000213180.2	ENSMUSG00000110773.2	Gm39326	chr9	lncRNA	predicted gene, 39326
chr9	44824764	44831908	-	44824764;44826109	44825949;44831908	ES	0.5	50	50	ENSMUST00000043675.9	ENSMUSG00000038717.10	Atp5l	chr9	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G
chr9	44824764	44831908	-	44824764	44825949	5pMXE	0.5	50	50	ENSMUST00000213999.2	ENSMUSG00000038717.10	Atp5l	chr9	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G
chr9	44852584	44856103	-	44852584;44854168	44853864;44856103	ES	0.5	50	50	ENSMUST00000117506.9	ENSMUSG00000059890.17	Ube4a	chr9	protein_coding	ubiquitination factor E4A
chr9	44871437	44876783	-	44871437;44874730	44874635;44876783	ES	0.5	50	50	ENSMUST00000117506.9	ENSMUSG00000059890.17	Ube4a	chr9	protein_coding	ubiquitination factor E4A
chr9	44846799;44849044	44848931;44849147	-	44846799	44849147	cassetteExon	0.5	100	100	ENSMUST00000117506.9	ENSMUSG00000059890.17	Ube4a	chr9	protein_coding	ubiquitination factor E4A
chr9	44864470	44871277	-	44864413	44871277	A3SS	0.33	50	50	ENSMUST00000117506.9	ENSMUSG00000059890.17	Ube4a	chr9	protein_coding	ubiquitination factor E4A
chr9	44868023	44871277	-	44864413	44871277	A3SS	0.33	50	50	ENSMUST00000117506.9	ENSMUSG00000059890.17	Ube4a	chr9	protein_coding	ubiquitination factor E4A
chr9	44871425	44874635	-	44871437	44874635	A3SS	0.5	50	50	ENSMUST00000117506.9	ENSMUSG00000059890.17	Ube4a	chr9	protein_coding	ubiquitination factor E4A
chr9	44871437	44874662	-	44871437	44874635	A5SS	0.25	50	50	ENSMUST00000117506.9	ENSMUSG00000059890.17	Ube4a	chr9	protein_coding	ubiquitination factor E4A
chr9	44871437	44876771	-	44871437	44874635	A5SS&ES	0.25	50	50	ENSMUST00000117506.9	ENSMUSG00000059890.17	Ube4a	chr9	protein_coding	ubiquitination factor E4A
chr9	44874730	44876771	-	44874730	44876783	A5SS	0.5	50	50	ENSMUST00000117506.9	ENSMUSG00000059890.17	Ube4a	chr9	protein_coding	ubiquitination factor E4A
chr9	44864470;44868023	44867840;44871277	-	44864470	44871277	cassetteExon	0.5	100	100	ENSMUST00000117549.8	ENSMUSG00000059890.17	Ube4a	chr9	protein_coding	ubiquitination factor E4A
chr9	44871437;44874730	44874662;44876783	-	44871437	44876783	cassetteExon	0.5	100	100	ENSMUST00000117549.8	ENSMUSG00000059890.17	Ube4a	chr9	protein_coding	ubiquitination factor E4A
chr9	44871437	44876771	-	44871437	44876783	A5SS	0.25	50	50	ENSMUST00000117549.8	ENSMUSG00000059890.17	Ube4a	chr9	protein_coding	ubiquitination factor E4A
chr9	44871437	44876771	-	44871437	44874662	A5SS&ES	0.25	50	50	ENSMUST00000145657.9	ENSMUSG00000059890.17	Ube4a	chr9	protein_coding	ubiquitination factor E4A
chr9	44871437;44874730	44874635;44876771	-	44871437	44876771	cassetteExon	0.5	100	100	ENSMUST00000213193.2	ENSMUSG00000059890.17	Ube4a	chr9	protein_coding	ubiquitination factor E4A
chr9	44871437;44874730	44874662;44876771	-	44871437	44876771	cassetteExon	0.5	100	100	ENSMUST00000213193.2	ENSMUSG00000059890.17	Ube4a	chr9	protein_coding	ubiquitination factor E4A
chr9	44871437	44876783	-	44871437	44874635	A5SS&ES	0.25	50	50	ENSMUST00000213890.2	ENSMUSG00000059890.17	Ube4a	chr9	protein_coding	ubiquitination factor E4A
chr9	44871437	44876783	-	44874730	44876783	A3SS&ES	0.5	50	50	ENSMUST00000125642.8	ENSMUSG00000059890.17	Ube4a	chr9	protein_coding	ubiquitination factor E4A
chr9	44864470	44871277	-	44868023	44871277	3pMXE	0.33	50	50	ENSMUST00000155400.3	ENSMUSG00000059890.17	Ube4a	chr9	protein_coding	ubiquitination factor E4A
chr9	44885688	44891564	-	44885688;44886568	44886545;44891564	ES	0.5	50	50	ENSMUST00000002101.12	ENSMUSG00000002033.15	Cd3g	chr9	protein_coding	CD3 antigen, gamma polypeptide
chr9	44897213	44897355	+	44897033	44897355	A5SS	0.5	50	50	ENSMUST00000034602.9	ENSMUSG00000032094.9	Cd3d	chr9	protein_coding	CD3 antigen, delta polypeptide
chr9	44951880	44953336	+	44951880	44954998	A3SS	0.5	50	50	ENSMUST00000217097.2	ENSMUSG00000032092.6	Mpzl2	chr9	protein_coding	myelin protein zero-like 2
chr9	44954092	44954998	+	44951880	44954998	A5SS	0.5	50	50	ENSMUST00000217097.2	ENSMUSG00000032092.6	Mpzl2	chr9	protein_coding	myelin protein zero-like 2
chr9	44953523	44953909	+	44953523	44955013	A3SS	0.5	50	50	ENSMUST00000215886.2	ENSMUSG00000032092.6	Mpzl2	chr9	protein_coding	myelin protein zero-like 2
chr9	44973505;44974267	44974162;44977637	+	44973505	44977637	cassetteExon	0.5	100	100	ENSMUST00000114664.8	ENSMUSG00000070305.11	Mpzl3	chr9	protein_coding	myelin protein zero-like 3
chr9	44970612	44973339	+	44966616	44973339	A5SS	0.5	50	50	ENSMUST00000114664.8	ENSMUSG00000070305.11	Mpzl3	chr9	protein_coding	myelin protein zero-like 3
chr9	44997814	44998139	+	44995404	44998139	A5SS	0.33	50	50	ENSMUST00000050020.8	ENSMUSG00000048534.8	Jaml	chr9	protein_coding	junction adhesion molecule like
chr9	45014221	45014333	+	45012443	45014333	A5SS	0.5	50	50	ENSMUST00000050020.8	ENSMUSG00000048534.8	Jaml	chr9	protein_coding	junction adhesion molecule like
chr9	44990594	44993931	+	44990594	44998139	A3SS	0.5	50	50	ENSMUST00000216426.2	ENSMUSG00000048534.8	Jaml	chr9	protein_coding	junction adhesion molecule like
chr9	44995404	44998139	+	44990594	44998139	A5SS	0.33	50	50	ENSMUST00000216426.2	ENSMUSG00000048534.8	Jaml	chr9	protein_coding	junction adhesion molecule like
chr9	44997814	44998139	+	44990594	44998139	A5SS	0.33	50	50	ENSMUST00000216426.2	ENSMUSG00000048534.8	Jaml	chr9	protein_coding	junction adhesion molecule like
chr9	45022057;45037071	45036975;45046077	-	45022057	45046077	cassetteExon	0.5	100	100	ENSMUST00000098827.3	ENSMUSG00000074385.4	Gm10684	chr9	lncRNA	predicted gene 10684
chr9	45079633	45079894	-	45079664	45079894	A3SS	0.5	50	50	ENSMUST00000213594.2	ENSMUSG00000111811.2	Gm39327	chr9	lncRNA	predicted gene, 39327
chr9	45085305	45086757	-	45085305;45086542	45086400;45086757	ES	0.5	50	50	ENSMUST00000034599.15	ENSMUSG00000032091.16	Tmprss4	chr9	protein_coding	transmembrane protease, serine 4
chr9	45095691	45097177	-	45095691	45097113	A5SS	0.5	50	50	ENSMUST00000034599.15	ENSMUSG00000032091.16	Tmprss4	chr9	protein_coding	transmembrane protease, serine 4
chr9	45095691	45097177	-	45095651	45097177	A3SS	0.5	50	50	ENSMUST00000170069.8	ENSMUSG00000032091.16	Tmprss4	chr9	protein_coding	transmembrane protease, serine 4
chr9	45085305	45086757	-	45086542	45086757	3pMXE	0.5	50	50	ENSMUST00000163945.2	ENSMUSG00000032091.16	Tmprss4	chr9	protein_coding	transmembrane protease, serine 4
chr9	45093613	45152691	+	45093613	45103886	3pMXE	0.5	50	50	ENSMUST00000171277.2	ENSMUSG00000091996.9	BC049352	chr9	protein_coding	cDNA sequence BC049352
chr9	45107291	45152691	+	45093613	45152691	A5SS	0.5	50	50	ENSMUST00000164650.8	ENSMUSG00000091996.9	BC049352	chr9	protein_coding	cDNA sequence BC049352
chr9	45177940	45180304	-	45177940;45178518	45178398;45180304	ES	0.33	50	50	ENSMUST00000034594.16	ENSMUSG00000032089.17	Il10ra	chr9	protein_coding	interleukin 10 receptor, alpha
chr9	45178512	45180304	-	45178518	45180304	A3SS	0.33	50	50	ENSMUST00000034594.16	ENSMUSG00000032089.17	Il10ra	chr9	protein_coding	interleukin 10 receptor, alpha
chr9	45177940;45178512	45178398;45180304	-	45177940	45180304	cassetteExon	0.5	100	100	ENSMUST00000176808.2	ENSMUSG00000032089.17	Il10ra	chr9	protein_coding	interleukin 10 receptor, alpha
chr9	45230617;45232818	45232667;45233265	-	45230617	45233265	cassetteExon	0.5	100	100	ENSMUST00000129215.8	ENSMUSG00000085831.8	Lncbate3	chr9	lncRNA	brown adipose tissue enriched long noncoding RNA 3
chr9	45281786	45286332	+	45281786	45301286	A3SS	0.5	50	50	ENSMUST00000085939.8	ENSMUSG00000066705.8	Fxyd6	chr9	protein_coding	FXYD domain-containing ion transport regulator 6
chr9	45301345	45301935	+	45301345	45301932	A3SS	0.5	50	50	ENSMUST00000085939.8	ENSMUSG00000066705.8	Fxyd6	chr9	protein_coding	FXYD domain-containing ion transport regulator 6
chr9	45319672	45321001	+	45319672;45320847	45320811;45321001	ES	0.5	50	50	ENSMUST00000214680.2	ENSMUSG00000059412.8	Fxyd2	chr9	protein_coding	FXYD domain-containing ion transport regulator 2
chr9	45311301;45314598	45314472;45319404	+	45311301	45319404	cassetteExon	0.5	100	100	ENSMUST00000214680.2	ENSMUSG00000059412.8	Fxyd2	chr9	protein_coding	FXYD domain-containing ion transport regulator 2
chr9	45321031	45321275	+	45321031	45321290	A3SS	0.5	50	50	ENSMUST00000214680.2	ENSMUSG00000059412.8	Fxyd2	chr9	protein_coding	FXYD domain-containing ion transport regulator 2
chr9	45315794	45319404	+	45311301	45319404	A5SS	0.16	50	50	ENSMUST00000214680.2	ENSMUSG00000059412.8	Fxyd2	chr9	protein_coding	FXYD domain-containing ion transport regulator 2
chr9	45317464	45319404	+	45311301	45319404	A5SS	0.16	50	50	ENSMUST00000214680.2	ENSMUSG00000059412.8	Fxyd2	chr9	protein_coding	FXYD domain-containing ion transport regulator 2
chr9	45317500	45319404	+	45311301	45319404	A5SS	0.16	50	50	ENSMUST00000214680.2	ENSMUSG00000059412.8	Fxyd2	chr9	protein_coding	FXYD domain-containing ion transport regulator 2
chr9	45318523	45319404	+	45311301	45319404	A5SS	0.16	50	50	ENSMUST00000214680.2	ENSMUSG00000059412.8	Fxyd2	chr9	protein_coding	FXYD domain-containing ion transport regulator 2
chr9	45319672	45321001	+	45319672	45320811	A3SS&ES	0.5	50	50	ENSMUST00000216289.2	ENSMUSG00000059412.8	Fxyd2	chr9	protein_coding	FXYD domain-containing ion transport regulator 2
chr9	45313794	45314472	+	45311301	45314472	A5SS	0.5	50	50	ENSMUST00000216289.2	ENSMUSG00000059412.8	Fxyd2	chr9	protein_coding	FXYD domain-containing ion transport regulator 2
chr9	45315794	45319404	+	45314598	45319404	A5SS	0.16	50	50	ENSMUST00000216289.2	ENSMUSG00000059412.8	Fxyd2	chr9	protein_coding	FXYD domain-containing ion transport regulator 2
chr9	45317464	45319404	+	45314598	45319404	A5SS	0.16	50	50	ENSMUST00000216289.2	ENSMUSG00000059412.8	Fxyd2	chr9	protein_coding	FXYD domain-containing ion transport regulator 2
chr9	45317500	45319404	+	45314598	45319404	A5SS	0.16	50	50	ENSMUST00000216289.2	ENSMUSG00000059412.8	Fxyd2	chr9	protein_coding	FXYD domain-containing ion transport regulator 2
chr9	45318523	45319404	+	45314598	45319404	A5SS	0.16	50	50	ENSMUST00000216289.2	ENSMUSG00000059412.8	Fxyd2	chr9	protein_coding	FXYD domain-containing ion transport regulator 2
chr9	45311301	45319404	+	45314598	45319404	5pMXE	0.16	50	50	ENSMUST00000214257.2	ENSMUSG00000059412.8	Fxyd2	chr9	protein_coding	FXYD domain-containing ion transport regulator 2
chr9	45319672	45321001	+	45320847	45321001	A5SS	0.5	50	50	ENSMUST00000214466.2	ENSMUSG00000059412.8	Fxyd2	chr9	protein_coding	FXYD domain-containing ion transport regulator 2
chr9	45317464	45319404	+	45315794	45319404	A5SS	0.16	50	50	ENSMUST00000216840.2	ENSMUSG00000059412.8	Fxyd2	chr9	protein_coding	FXYD domain-containing ion transport regulator 2
chr9	45317500	45319404	+	45315794	45319404	A5SS	0.16	50	50	ENSMUST00000216840.2	ENSMUSG00000059412.8	Fxyd2	chr9	protein_coding	FXYD domain-containing ion transport regulator 2
chr9	45318523	45319404	+	45315794	45319404	A5SS	0.16	50	50	ENSMUST00000216840.2	ENSMUSG00000059412.8	Fxyd2	chr9	protein_coding	FXYD domain-containing ion transport regulator 2
chr9	45317500	45319404	+	45317464	45319404	A5SS	0.16	50	50	ENSMUST00000213158.2	ENSMUSG00000059412.8	Fxyd2	chr9	protein_coding	FXYD domain-containing ion transport regulator 2
chr9	45318523	45319404	+	45317464	45319404	A5SS	0.16	50	50	ENSMUST00000213158.2	ENSMUSG00000059412.8	Fxyd2	chr9	protein_coding	FXYD domain-containing ion transport regulator 2
chr9	45318523	45319404	+	45317500	45319404	A5SS	0.16	50	50	ENSMUST00000214017.2	ENSMUSG00000059412.8	Fxyd2	chr9	protein_coding	FXYD domain-containing ion transport regulator 2
chr9	45341955	45342443	-	45333055	45342443	A3SS	0.5	50	50	ENSMUST00000181230.2	ENSMUSG00000097074.3	4833428L15Rik	chr9	lncRNA	RIKEN cDNA 4833428L15 gene
chr9	45337991	45338748	+	45337991;45338638	45338522;45338748	ES	0.5	50	50	ENSMUST00000217335.2	ENSMUSG00000032087.12	Dscaml1	chr9	protein_coding	DS cell adhesion molecule like 1
chr9	45361926	45572431	+	45361926	45482137	3pMXE	0.33	50	50	ENSMUST00000217335.2	ENSMUSG00000032087.12	Dscaml1	chr9	protein_coding	DS cell adhesion molecule like 1
chr9	45338944	45356951	+	45338944	45358963	A3SS	0.5	50	50	ENSMUST00000217335.2	ENSMUSG00000032087.12	Dscaml1	chr9	protein_coding	DS cell adhesion molecule like 1
chr9	45361926	45461831	+	45361926	45482137	A3SS	0.33	50	50	ENSMUST00000217335.2	ENSMUSG00000032087.12	Dscaml1	chr9	protein_coding	DS cell adhesion molecule like 1
chr9	45341810	45358963	+	45338944	45358963	A5SS	0.5	50	50	ENSMUST00000217335.2	ENSMUSG00000032087.12	Dscaml1	chr9	protein_coding	DS cell adhesion molecule like 1
chr9	45361926	45461831	+	45361926	45572431	A3SS	0.33	50	50	ENSMUST00000213919.2	ENSMUSG00000032087.12	Dscaml1	chr9	protein_coding	DS cell adhesion molecule like 1
chr9	45337991	45338748	+	45338638	45338748	5pMXE	0.5	50	50	ENSMUST00000216340.2	ENSMUSG00000032087.12	Dscaml1	chr9	protein_coding	DS cell adhesion molecule like 1
chr9	45634828	45651778	+	45634828;45643464	45643325;45651778	ES	0.5	50	50	ENSMUST00000239471.2	ENSMUSG00000032087.12	Dscaml1	chr9	protein_coding	DS cell adhesion molecule like 1
chr9	45655618	45656339	+	45655618	45656268	A3SS	0.5	50	50	ENSMUST00000239471.2	ENSMUSG00000032087.12	Dscaml1	chr9	protein_coding	DS cell adhesion molecule like 1
chr9	45584213	45585749	+	45584220	45585749	A5SS	0.5	50	50	ENSMUST00000239471.2	ENSMUSG00000032087.12	Dscaml1	chr9	protein_coding	DS cell adhesion molecule like 1
chr9	45691134	45698724	-	45691134;45697219	45697076;45698724	ES	0.5	50	50	ENSMUST00000117194.8	ENSMUSG00000043987.19	Cep164	chr9	protein_coding	centrosomal protein 164
chr9	45691134;45693546	45693250;45697076	-	45691134	45697076	cassetteExon	0.5	100	100	ENSMUST00000117194.8	ENSMUSG00000043987.19	Cep164	chr9	protein_coding	centrosomal protein 164
chr9	45735062;45738106	45738024;45739800	-	45735062	45739800	cassetteExon	0.5	100	100	ENSMUST00000117194.8	ENSMUSG00000043987.19	Cep164	chr9	protein_coding	centrosomal protein 164
chr9	45686202	45686490	-	45686205	45686490	A3SS	0.5	50	50	ENSMUST00000117194.8	ENSMUSG00000043987.19	Cep164	chr9	protein_coding	centrosomal protein 164
chr9	45696327	45697076	-	45691134	45697076	A3SS	0.33	50	50	ENSMUST00000117194.8	ENSMUSG00000043987.19	Cep164	chr9	protein_coding	centrosomal protein 164
chr9	45714066	45714471	-	45714075	45714471	A3SS	0.5	50	50	ENSMUST00000117194.8	ENSMUSG00000043987.19	Cep164	chr9	protein_coding	centrosomal protein 164
chr9	45718942	45721002	-	45714626	45721002	A3SS	0.5	50	50	ENSMUST00000117194.8	ENSMUSG00000043987.19	Cep164	chr9	protein_coding	centrosomal protein 164
chr9	45714626	45717284	-	45714626	45721002	A5SS	0.5	50	50	ENSMUST00000117194.8	ENSMUSG00000043987.19	Cep164	chr9	protein_coding	centrosomal protein 164
chr9	45693546	45697076	-	45693546;45696327	45696181;45697076	ES	0.33	50	50	ENSMUST00000213154.2	ENSMUSG00000043987.19	Cep164	chr9	protein_coding	centrosomal protein 164
chr9	45714626	45721002	-	45714626;45718942	45717284;45721002	ES	0.5	50	50	ENSMUST00000213154.2	ENSMUSG00000043987.19	Cep164	chr9	protein_coding	centrosomal protein 164
chr9	45691134	45693250	-	45691134	45698724	A5SS	0.33	50	50	ENSMUST00000217554.2	ENSMUSG00000043987.19	Cep164	chr9	protein_coding	centrosomal protein 164
chr9	45768546;45769799	45769698;45770208	+	45768546	45770208	cassetteExon	0.5	100	100	ENSMUST00000078111.11	ENSMUSG00000032086.13	Bace1	chr9	protein_coding	beta-site APP cleaving enzyme 1
chr9	45766141	45767461	+	45766141	45767386	A3SS	0.5	50	50	ENSMUST00000078111.11	ENSMUSG00000032086.13	Bace1	chr9	protein_coding	beta-site APP cleaving enzyme 1
chr9	45751340	45764186	+	45750586	45764186	A5SS	0.5	50	50	ENSMUST00000078111.11	ENSMUSG00000032086.13	Bace1	chr9	protein_coding	beta-site APP cleaving enzyme 1
chr9	45765953	45767386	+	45766141	45767386	A5SS	0.5	50	50	ENSMUST00000078111.11	ENSMUSG00000032086.13	Bace1	chr9	protein_coding	beta-site APP cleaving enzyme 1
chr9	45777959	45778798	-	45777959;45778349	45778245;45778798	ES	0.5	50	50	ENSMUST00000161203.8	ENSMUSG00000042790.17	Rnf214	chr9	protein_coding	ring finger protein 214
chr9	45809789	45816104	-	45809789;45811554	45811509;45816104	ES	0.5	50	50	ENSMUST00000161203.8	ENSMUSG00000042790.17	Rnf214	chr9	protein_coding	ring finger protein 214
chr9	45809789	45811044	-	45809789	45811509	A5SS	0.33	50	50	ENSMUST00000161203.8	ENSMUSG00000042790.17	Rnf214	chr9	protein_coding	ring finger protein 214
chr9	45811554	45816068	-	45811554	45816104	A5SS	0.5	50	50	ENSMUST00000161203.8	ENSMUSG00000042790.17	Rnf214	chr9	protein_coding	ring finger protein 214
chr9	45816217	45817650	-	45816217	45818036	A5SS	0.5	50	50	ENSMUST00000161203.8	ENSMUSG00000042790.17	Rnf214	chr9	protein_coding	ring finger protein 214
chr9	45809789	45816104	-	45809789;45811554	45811044;45816104	ES	0.5	50	50	ENSMUST00000058720.13	ENSMUSG00000042790.17	Rnf214	chr9	protein_coding	ring finger protein 214
chr9	45809789	45816104	-	45809789	45811044	A5SS&ES	0.33	50	50	ENSMUST00000162699.8	ENSMUSG00000042790.17	Rnf214	chr9	protein_coding	ring finger protein 214
chr9	45809789	45816104	-	45809789	45811509	A5SS&ES	0.33	50	50	ENSMUST00000160811.3	ENSMUSG00000042790.17	Rnf214	chr9	protein_coding	ring finger protein 214
chr9	45830651	45837209	+	45830651;45831192	45831090;45837209	ES	0.5	50	50	ENSMUST00000039059.8	ENSMUSG00000035382.10	Pcsk7	chr9	protein_coding	proprotein convertase subtilisin/kexin type 7
chr9	45838126;45838416	45838335;45838873	+	45838126	45838873	cassetteExon	0.5	100	100	ENSMUST00000039059.8	ENSMUSG00000035382.10	Pcsk7	chr9	protein_coding	proprotein convertase subtilisin/kexin type 7
chr9	45831192	45837216	+	45831192	45837209	A3SS	0.5	50	50	ENSMUST00000039059.8	ENSMUSG00000035382.10	Pcsk7	chr9	protein_coding	proprotein convertase subtilisin/kexin type 7
chr9	45818601	45819826	+	45818337	45819826	A5SS	0.5	50	50	ENSMUST00000039059.8	ENSMUSG00000035382.10	Pcsk7	chr9	protein_coding	proprotein convertase subtilisin/kexin type 7
chr9	45821821	45822382	+	45821807	45822382	A5SS	0.5	50	50	ENSMUST00000039059.8	ENSMUSG00000035382.10	Pcsk7	chr9	protein_coding	proprotein convertase subtilisin/kexin type 7
chr9	45829927	45830060	+	45827386	45830060	A5SS	0.5	50	50	ENSMUST00000039059.8	ENSMUSG00000035382.10	Pcsk7	chr9	protein_coding	proprotein convertase subtilisin/kexin type 7
chr9	45830651	45837209	+	45830651	45831090	A3SS&ES	0.5	50	50	ENSMUST00000215189.2	ENSMUSG00000035382.10	Pcsk7	chr9	protein_coding	proprotein convertase subtilisin/kexin type 7
chr9	45843071	45846844	-	45843071	45847132	A5SS	0.5	50	50	ENSMUST00000034590.4	ENSMUSG00000032085.6	Tagln	chr9	protein_coding	transgelin
chr9	45858353	45859513	-	45858353;45859186	45859134;45859513	ES	0.33	50	50	ENSMUST00000038488.17	ENSMUSG00000034908.17	Sidt2	chr9	protein_coding	SID1 transmembrane family, member 2
chr9	45857082;45857866	45857804;45858043	-	45857082	45858043	cassetteExon	0.5	100	100	ENSMUST00000038488.17	ENSMUSG00000034908.17	Sidt2	chr9	protein_coding	SID1 transmembrane family, member 2
chr9	45858353;45858850	45858839;45859134	-	45858353	45859134	cassetteExon	0.5	100	100	ENSMUST00000038488.17	ENSMUSG00000034908.17	Sidt2	chr9	protein_coding	SID1 transmembrane family, member 2
chr9	45858353;45858995	45858839;45859134	-	45858353	45859134	cassetteExon	0.5	100	100	ENSMUST00000038488.17	ENSMUSG00000034908.17	Sidt2	chr9	protein_coding	SID1 transmembrane family, member 2
chr9	45858353;45858995	45858927;45859134	-	45858353	45859134	cassetteExon	0.5	100	100	ENSMUST00000038488.17	ENSMUSG00000034908.17	Sidt2	chr9	protein_coding	SID1 transmembrane family, member 2
chr9	45850805	45852599	-	45850818	45852599	A3SS	0.5	50	50	ENSMUST00000038488.17	ENSMUSG00000034908.17	Sidt2	chr9	protein_coding	SID1 transmembrane family, member 2
chr9	45857064	45858043	-	45857082	45858043	A3SS	0.33	50	50	ENSMUST00000038488.17	ENSMUSG00000034908.17	Sidt2	chr9	protein_coding	SID1 transmembrane family, member 2
chr9	45859207	45859513	-	45859186	45859513	A3SS	0.33	50	50	ENSMUST00000038488.17	ENSMUSG00000034908.17	Sidt2	chr9	protein_coding	SID1 transmembrane family, member 2
chr9	45857064	45858043	-	45857866	45858043	A3SS&ES	0.33	50	50	ENSMUST00000114573.9	ENSMUSG00000034908.17	Sidt2	chr9	protein_coding	SID1 transmembrane family, member 2
chr9	45858353	45859134	-	45858353	45858927	5pMXE	0.25	50	50	ENSMUST00000160670.8	ENSMUSG00000034908.17	Sidt2	chr9	protein_coding	SID1 transmembrane family, member 2
chr9	45858353	45859513	-	45858353	45858927	5pMXE	0.25	50	50	ENSMUST00000160670.8	ENSMUSG00000034908.17	Sidt2	chr9	protein_coding	SID1 transmembrane family, member 2
chr9	45858353	45858839	-	45858353	45858927	A5SS	0.25	50	50	ENSMUST00000160670.8	ENSMUSG00000034908.17	Sidt2	chr9	protein_coding	SID1 transmembrane family, member 2
chr9	45858353;45858850	45858839;45859134	-	45858353;45858995	45858927;45859134	MXE	0.5	100	100	ENSMUST00000160138.8	ENSMUSG00000034908.17	Sidt2	chr9	protein_coding	SID1 transmembrane family, member 2
chr9	45858353;45859186	45858839;45859513	-	45858353	45859513	cassetteExon	0.5	100	100	ENSMUST00000162379.2	ENSMUSG00000034908.17	Sidt2	chr9	protein_coding	SID1 transmembrane family, member 2
chr9	45858353;45859186	45858927;45859513	-	45858353	45859513	cassetteExon	0.5	100	100	ENSMUST00000162379.2	ENSMUSG00000034908.17	Sidt2	chr9	protein_coding	SID1 transmembrane family, member 2
chr9	45858353;45859207	45858839;45859513	-	45858353	45859513	cassetteExon	0.5	100	100	ENSMUST00000162379.2	ENSMUSG00000034908.17	Sidt2	chr9	protein_coding	SID1 transmembrane family, member 2
chr9	45858353;45859207	45858927;45859513	-	45858353	45859513	cassetteExon	0.5	100	100	ENSMUST00000162379.2	ENSMUSG00000034908.17	Sidt2	chr9	protein_coding	SID1 transmembrane family, member 2
chr9	45858353;45859207	45859134;45859513	-	45858353	45859513	cassetteExon	0.5	100	100	ENSMUST00000162379.2	ENSMUSG00000034908.17	Sidt2	chr9	protein_coding	SID1 transmembrane family, member 2
chr9	45884362	45887339	-	45884362;45886495	45886379;45887339	ES	0.5	50	50	ENSMUST00000172450.3	ENSMUSG00000003131.8	Pafah1b2	chr9	protein_coding	platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
chr9	45890027	45896600	-	45890027	45896003	5pMXE	0.16	50	50	ENSMUST00000172450.3	ENSMUSG00000003131.8	Pafah1b2	chr9	protein_coding	platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
chr9	45890027	45923821	-	45890027	45896003	5pMXE	0.16	50	50	ENSMUST00000172450.3	ENSMUSG00000003131.8	Pafah1b2	chr9	protein_coding	platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
chr9	45890027;45895337	45895149;45896003	-	45890027	45896003	cassetteExon	0.5	100	100	ENSMUST00000172450.3	ENSMUSG00000003131.8	Pafah1b2	chr9	protein_coding	platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
chr9	45890021	45896003	-	45890027	45896003	A3SS	0.33	50	50	ENSMUST00000172450.3	ENSMUSG00000003131.8	Pafah1b2	chr9	protein_coding	platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
chr9	45890027	45895480	-	45890027	45896003	A5SS	0.16	50	50	ENSMUST00000172450.3	ENSMUSG00000003131.8	Pafah1b2	chr9	protein_coding	platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
chr9	45890027	45895957	-	45890027	45896003	A5SS	0.16	50	50	ENSMUST00000172450.3	ENSMUSG00000003131.8	Pafah1b2	chr9	protein_coding	platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
chr9	45890027	45923821	-	45890027	45896600	5pMXE	0.16	50	50	ENSMUST00000214179.2	ENSMUSG00000003131.8	Pafah1b2	chr9	protein_coding	platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
chr9	45890027	45895149	-	45890027	45896600	A5SS	0.16	50	50	ENSMUST00000214179.2	ENSMUSG00000003131.8	Pafah1b2	chr9	protein_coding	platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
chr9	45890027	45895480	-	45890027	45896600	A5SS	0.16	50	50	ENSMUST00000214179.2	ENSMUSG00000003131.8	Pafah1b2	chr9	protein_coding	platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
chr9	45890027	45895957	-	45890027	45896600	A5SS	0.16	50	50	ENSMUST00000214179.2	ENSMUSG00000003131.8	Pafah1b2	chr9	protein_coding	platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
chr9	45895337	45896003	-	45890021	45896003	A3SS	0.33	50	50	ENSMUST00000215060.2	ENSMUSG00000003131.8	Pafah1b2	chr9	protein_coding	platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
chr9	45884362	45887339	-	45886495	45887339	3pMXE	0.5	50	50	ENSMUST00000215427.2	ENSMUSG00000003131.8	Pafah1b2	chr9	protein_coding	platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
chr9	45890027	45895957	-	45890027	45895480	5pMXE	0.16	50	50	ENSMUST00000215427.2	ENSMUSG00000003131.8	Pafah1b2	chr9	protein_coding	platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
chr9	45890027	45923821	-	45890027	45895480	5pMXE	0.16	50	50	ENSMUST00000215427.2	ENSMUSG00000003131.8	Pafah1b2	chr9	protein_coding	platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
chr9	45890027	45895149	-	45890027	45895480	A5SS	0.16	50	50	ENSMUST00000215427.2	ENSMUSG00000003131.8	Pafah1b2	chr9	protein_coding	platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
chr9	45890027	45895149	-	45890027	45923821	A5SS	0.16	50	50	ENSMUST00000217514.2	ENSMUSG00000003131.8	Pafah1b2	chr9	protein_coding	platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
chr9	45890027	45895957	-	45890027	45923821	A5SS	0.16	50	50	ENSMUST00000217514.2	ENSMUSG00000003131.8	Pafah1b2	chr9	protein_coding	platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
chr9	45890027	45895149	-	45890027	45895957	A5SS	0.16	50	50	ENSMUST00000217636.2	ENSMUSG00000003131.8	Pafah1b2	chr9	protein_coding	platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
chr9	46106228	46107091	+	46106228;46106607	46106464;46107091	ES	0.5	50	50	ENSMUST00000126865.8	ENSMUSG00000034135.16	Sik3	chr9	protein_coding	SIK family kinase 3
chr9	46113368	46119220	+	46113368;46115647	46115504;46119220	ES	0.5	50	50	ENSMUST00000126865.8	ENSMUSG00000034135.16	Sik3	chr9	protein_coding	SIK family kinase 3
chr9	46122113	46123148	+	46122113	46122968	A3SS	0.5	50	50	ENSMUST00000126865.8	ENSMUSG00000034135.16	Sik3	chr9	protein_coding	SIK family kinase 3
chr9	46131640	46132458	+	46131640	46132365	A3SS	0.5	50	50	ENSMUST00000126865.8	ENSMUSG00000034135.16	Sik3	chr9	protein_coding	SIK family kinase 3
chr9	46146024	46146617	-	46146024	46146453	5pMXE	0.25	50	50	ENSMUST00000121916.8	ENSMUSG00000032081.11	Apoc3	chr9	protein_coding	apolipoprotein C-III
chr9	46146024	46146820	-	46146024	46146453	5pMXE	0.25	50	50	ENSMUST00000121916.8	ENSMUSG00000032081.11	Apoc3	chr9	protein_coding	apolipoprotein C-III
chr9	46145838	46146557	-	46145838	46145957	A5SS&ES	0.5	50	50	ENSMUST00000121916.8	ENSMUSG00000032081.11	Apoc3	chr9	protein_coding	apolipoprotein C-III
chr9	46146024	46146557	-	46146024	46146453	A5SS	0.25	50	50	ENSMUST00000121916.8	ENSMUSG00000032081.11	Apoc3	chr9	protein_coding	apolipoprotein C-III
chr9	46145838	46146557	-	46145838;46146024	46145957;46146557	ES	0.5	50	50	ENSMUST00000034586.9	ENSMUSG00000032081.11	Apoc3	chr9	protein_coding	apolipoprotein C-III
chr9	46146024	46146617	-	46146024	46146557	5pMXE	0.25	50	50	ENSMUST00000034586.9	ENSMUSG00000032081.11	Apoc3	chr9	protein_coding	apolipoprotein C-III
chr9	46146024	46146820	-	46146024	46146557	5pMXE	0.25	50	50	ENSMUST00000034586.9	ENSMUSG00000032081.11	Apoc3	chr9	protein_coding	apolipoprotein C-III
chr9	46146024	46146617	-	46146024	46146820	A5SS	0.25	50	50	ENSMUST00000118649.8	ENSMUSG00000032081.11	Apoc3	chr9	protein_coding	apolipoprotein C-III
chr9	46181216	46181449	+	46181216	46181358	A3SS	0.5	50	50	ENSMUST00000214202.2	ENSMUSG00000032079.13	Apoa5	chr9	protein_coding	apolipoprotein A-V
chr9	46184665	46185354	+	46184665;46184937	46184776;46185354	ES	0.5	50	50	ENSMUST00000156440.8	ENSMUSG00000032078.18	Zpr1	chr9	protein_coding	ZPR1 zinc finger
chr9	46187151	46187710	+	46187151;46187545	46187498;46187710	ES	0.5	50	50	ENSMUST00000156440.8	ENSMUSG00000032078.18	Zpr1	chr9	protein_coding	ZPR1 zinc finger
chr9	46184665	46184819	+	46184665	46184776	A3SS	0.33	50	50	ENSMUST00000156440.8	ENSMUSG00000032078.18	Zpr1	chr9	protein_coding	ZPR1 zinc finger
chr9	46184665	46185354	+	46184665;46184937	46184819;46185354	ES	0.5	50	50	ENSMUST00000125239.9	ENSMUSG00000032078.18	Zpr1	chr9	protein_coding	ZPR1 zinc finger
chr9	46184665	46185354	+	46184937	46185354	5pMXE	0.5	50	50	ENSMUST00000141763.8	ENSMUSG00000032078.18	Zpr1	chr9	protein_coding	ZPR1 zinc finger
chr9	46187151	46187710	+	46187545	46187710	5pMXE	0.5	50	50	ENSMUST00000143511.2	ENSMUSG00000032078.18	Zpr1	chr9	protein_coding	ZPR1 zinc finger
chr9	46202708	46202998	+	46202708	46202993	A3SS	0.5	50	50	ENSMUST00000138498.2	ENSMUSG00000032077.6	Bud13	chr9	protein_coding	BUD13 homolog
chr9	46202716	46202993	+	46202708	46202993	A5SS	0.5	50	50	ENSMUST00000138498.2	ENSMUSG00000032077.6	Bud13	chr9	protein_coding	BUD13 homolog
chr9	46199733	46201424	+	46199733	46203364	A3SS	0.5	50	50	ENSMUST00000124887.2	ENSMUSG00000032077.6	Bud13	chr9	protein_coding	BUD13 homolog
chr9	46203131	46203364	+	46199733	46203364	A5SS	0.5	50	50	ENSMUST00000124887.2	ENSMUSG00000032077.6	Bud13	chr9	protein_coding	BUD13 homolog
chr9	46222931;46226179	46226092;46227132	-	46222931	46227132	cassetteExon	0.5	100	100	ENSMUST00000159565.8	ENSMUSG00000056617.13	4931429L15Rik	chr9	protein_coding	RIKEN cDNA 4931429L15 gene
chr9	46238600;46239193	46238950;46240041	-	46238600	46240041	cassetteExon	0.5	100	100	ENSMUST00000181712.3	ENSMUSG00000097463.3	4930448E22Rik	chr9	lncRNA	RIKEN cDNA 4930448E22 gene
chr9	46238600;46239397	46238950;46240041	-	46238600	46240041	cassetteExon	0.5	100	100	ENSMUST00000181712.3	ENSMUSG00000097463.3	4930448E22Rik	chr9	lncRNA	RIKEN cDNA 4930448E22 gene
chr9	46239193	46240041	-	46239397	46240041	A3SS	0.33	50	50	ENSMUST00000215242.2	ENSMUSG00000097463.3	4930448E22Rik	chr9	lncRNA	RIKEN cDNA 4930448E22 gene
chr9	46238600	46240041	-	46239193	46240041	3pMXE	0.33	50	50	ENSMUST00000215349.2	ENSMUSG00000097463.3	4930448E22Rik	chr9	lncRNA	RIKEN cDNA 4930448E22 gene
chr9	46254124;46261030	46260930;46261778	+	46254124	46261778	cassetteExon	0.5	100	100	ENSMUST00000213885.2	ENSMUSG00000110864.2	Gm31374	chr9	lncRNA	predicted gene, 31374
chr9	46309333	46309914	+	46308704	46309914	A5SS	0.5	50	50	ENSMUST00000217145.2	ENSMUSG00000110802.2	Gm47141	chr9	lncRNA	predicted gene, 47141
chr9	46444267	46445206	+	46444267	46444515	3pMXE	0.5	50	50	ENSMUST00000217323.2	ENSMUSG00000110767.2	Gm31432	chr9	lncRNA	predicted gene, 31432
chr9	46583068	46585587	+	46580625	46585587	A5SS	0.5	50	50	ENSMUST00000213995.2	ENSMUSG00000111800.2	Gm31557	chr9	lncRNA	predicted gene, 31557
chr9	46833044	46833649	+	46833249	46833649	A5SS	0.5	50	50	ENSMUST00000191603.7	ENSMUSG00000099696.7	2900052N01Rik	chr9	lncRNA	RIKEN cDNA 2900052N01 gene
chr9	47040915	47047877	-	47040915	47077101	A5SS	0.5	50	50	ENSMUST00000214227.2	ENSMUSG00000111669.2	Gm31698	chr9	lncRNA	predicted gene, 31698
chr9	47272184	47279605	-	47272184	47273550	5pMXE	0.33	50	50	ENSMUST00000209591.2	ENSMUSG00000109844.3	Gm31816	chr9	lncRNA	predicted gene, 31816
chr9	47182097;47190227	47189877;47208463	-	47182097	47208463	cassetteExon	0.5	100	100	ENSMUST00000209591.2	ENSMUSG00000109844.3	Gm31816	chr9	lncRNA	predicted gene, 31816
chr9	47208634	47272035	-	47219310	47272035	A3SS&ES	0.33	50	50	ENSMUST00000209591.2	ENSMUSG00000109844.3	Gm31816	chr9	lncRNA	predicted gene, 31816
chr9	47272184	47273168	-	47272184	47273550	A5SS	0.33	50	50	ENSMUST00000209591.2	ENSMUSG00000109844.3	Gm31816	chr9	lncRNA	predicted gene, 31816
chr9	47182097;47208634	47208463;47272035	-	47182097	47272035	cassetteExon	0.5	100	100	ENSMUST00000210492.2	ENSMUSG00000109844.3	Gm31816	chr9	lncRNA	predicted gene, 31816
chr9	47219310	47272035	-	47182097	47272035	A3SS	0.33	50	50	ENSMUST00000210492.2	ENSMUSG00000109844.3	Gm31816	chr9	lncRNA	predicted gene, 31816
chr9	47182097	47189877	-	47182097	47272035	A5SS	0.33	50	50	ENSMUST00000210492.2	ENSMUSG00000109844.3	Gm31816	chr9	lncRNA	predicted gene, 31816
chr9	47208634	47279605	-	47208634;47272184	47272035;47279605	ES	0.5	50	50	ENSMUST00000209388.2	ENSMUSG00000109844.3	Gm31816	chr9	lncRNA	predicted gene, 31816
chr9	47272184	47273168	-	47272184	47279605	A5SS	0.33	50	50	ENSMUST00000209388.2	ENSMUSG00000109844.3	Gm31816	chr9	lncRNA	predicted gene, 31816
chr9	47182097;47272184	47272035;47279605	-	47182097;47208634	47208463;47279605	MXE	0.5	100	100	ENSMUST00000209906.3	ENSMUSG00000109844.3	Gm31816	chr9	lncRNA	predicted gene, 31816
chr9	47725243	47759465	+	47725243;47740707	47740675;47759465	ES	0.25	50	50	ENSMUST00000114548.8	ENSMUSG00000032076.21	Cadm1	chr9	protein_coding	cell adhesion molecule 1
chr9	47759596	47768557	+	47759596	47761570	3pMXE	0.5	50	50	ENSMUST00000114548.8	ENSMUSG00000032076.21	Cadm1	chr9	protein_coding	cell adhesion molecule 1
chr9	47725243;47730115	47730032;47740675	+	47725243	47740675	cassetteExon	0.5	100	100	ENSMUST00000114548.8	ENSMUSG00000032076.21	Cadm1	chr9	protein_coding	cell adhesion molecule 1
chr9	47725243;47730115	47730032;47759465	+	47725243;47740707	47740675;47759465	MXE	0.5	100	100	ENSMUST00000114548.8	ENSMUSG00000032076.21	Cadm1	chr9	protein_coding	cell adhesion molecule 1
chr9	47740707;47748068	47748015;47759465	+	47740707	47759465	cassetteExon	0.5	100	100	ENSMUST00000114548.8	ENSMUSG00000032076.21	Cadm1	chr9	protein_coding	cell adhesion molecule 1
chr9	47441803	47634105	+	47441803	47699269	A3SS	0.5	50	50	ENSMUST00000114548.8	ENSMUSG00000032076.21	Cadm1	chr9	protein_coding	cell adhesion molecule 1
chr9	47740707	47744867	+	47740707	47759465	A3SS	0.33	50	50	ENSMUST00000114548.8	ENSMUSG00000032076.21	Cadm1	chr9	protein_coding	cell adhesion molecule 1
chr9	47740707	47744867	+	47740707	47748015	A3SS	0.33	50	50	ENSMUST00000152459.8	ENSMUSG00000032076.21	Cadm1	chr9	protein_coding	cell adhesion molecule 1
chr9	47725243;47730115	47730032;47759465	+	47725243	47759465	cassetteExon	0.5	100	100	ENSMUST00000143026.9	ENSMUSG00000032076.21	Cadm1	chr9	protein_coding	cell adhesion molecule 1
chr9	47748068	47759465	+	47725243	47759465	A5SS	0.25	50	50	ENSMUST00000143026.9	ENSMUSG00000032076.21	Cadm1	chr9	protein_coding	cell adhesion molecule 1
chr9	47730115	47759465	+	47730115;47740707	47740675;47759465	ES	0.25	50	50	ENSMUST00000085909.9	ENSMUSG00000032076.21	Cadm1	chr9	protein_coding	cell adhesion molecule 1
chr9	47748068	47759465	+	47730115	47759465	A5SS	0.25	50	50	ENSMUST00000114547.8	ENSMUSG00000032076.21	Cadm1	chr9	protein_coding	cell adhesion molecule 1
chr9	47725243	47740675	+	47725243	47730032	3pMXE	0.33	50	50	ENSMUST00000124073.8	ENSMUSG00000032076.21	Cadm1	chr9	protein_coding	cell adhesion molecule 1
chr9	47725243	47759465	+	47725243	47730032	3pMXE	0.33	50	50	ENSMUST00000124073.8	ENSMUSG00000032076.21	Cadm1	chr9	protein_coding	cell adhesion molecule 1
chr9	48050706	48070003	-	48050706	48062488	5pMXE	0.5	50	50	ENSMUST00000213821.2	ENSMUSG00000110924.2	Gm40518	chr9	lncRNA	predicted gene, 40518
chr9	48073557	48266287	+	48073557	48144511	A3SS&ES	0.5	50	50	ENSMUST00000216998.2	ENSMUSG00000044229.10	Nxpe4	chr9	protein_coding	neurexophilin and PC-esterase domain family, member 4
chr9	48272814	48287173	+	48144582	48287173	A5SS	0.33	50	50	ENSMUST00000216998.2	ENSMUSG00000044229.10	Nxpe4	chr9	protein_coding	neurexophilin and PC-esterase domain family, member 4
chr9	48273475	48287173	+	48144582	48287173	A5SS	0.33	50	50	ENSMUST00000216998.2	ENSMUSG00000044229.10	Nxpe4	chr9	protein_coding	neurexophilin and PC-esterase domain family, member 4
chr9	48287367	48300172	+	48287204	48300172	A5SS	0.5	50	50	ENSMUST00000216998.2	ENSMUSG00000044229.10	Nxpe4	chr9	protein_coding	neurexophilin and PC-esterase domain family, member 4
chr9	48073557;48144582	48144511;48287173	+	48073557;48272814	48266287;48287173	MXE	0.5	100	100	ENSMUST00000215780.2	ENSMUSG00000044229.10	Nxpe4	chr9	protein_coding	neurexophilin and PC-esterase domain family, member 4
chr9	48273475	48287173	+	48272814	48287173	A5SS	0.33	50	50	ENSMUST00000215780.2	ENSMUSG00000044229.10	Nxpe4	chr9	protein_coding	neurexophilin and PC-esterase domain family, member 4
chr9	48234402	48250814	-	48234402;48238121	48237391;48250814	ES	0.33	50	50	ENSMUST00000034527.14	ENSMUSG00000032028.16	Nxpe2	chr9	protein_coding	neurexophilin and PC-esterase domain family, member 2
chr9	48250922	48264664	-	48250922	48251872	5pMXE	0.5	50	50	ENSMUST00000034527.14	ENSMUSG00000032028.16	Nxpe2	chr9	protein_coding	neurexophilin and PC-esterase domain family, member 2
chr9	48243081	48250814	-	48238121	48250814	A3SS	0.33	50	50	ENSMUST00000034527.14	ENSMUSG00000032028.16	Nxpe2	chr9	protein_coding	neurexophilin and PC-esterase domain family, member 2
chr9	48238121	48250814	-	48234402	48250814	A3SS	0.33	50	50	ENSMUST00000135457.8	ENSMUSG00000032028.16	Nxpe2	chr9	protein_coding	neurexophilin and PC-esterase domain family, member 2
chr9	48243081	48250814	-	48234402	48250814	A3SS	0.33	50	50	ENSMUST00000135457.8	ENSMUSG00000032028.16	Nxpe2	chr9	protein_coding	neurexophilin and PC-esterase domain family, member 2
chr9	48234402	48237391	-	48234402	48250814	A5SS	0.5	50	50	ENSMUST00000135457.8	ENSMUSG00000032028.16	Nxpe2	chr9	protein_coding	neurexophilin and PC-esterase domain family, member 2
chr9	48335166	48342288	+	48335166	48342304	A3SS	0.5	50	50	ENSMUST00000209981.3	ENSMUSG00000109675.3	Nxpe1-ps	chr9	transcribed_unprocessed_pseudogene	neurexophilin and PC-esterase domain family, member 1, pseudogene
chr9	48342500	48342708	+	48342507	48342708	A5SS	0.5	50	50	ENSMUST00000209981.3	ENSMUSG00000109675.3	Nxpe1-ps	chr9	transcribed_unprocessed_pseudogene	neurexophilin and PC-esterase domain family, member 1, pseudogene
chr9	48386497	48391707	-	48386497;48390693	48390610;48391707	ES	0.5	50	50	ENSMUST00000034524.5	ENSMUSG00000032026.8	Rexo2	chr9	protein_coding	RNA exonuclease 2
chr9	48384921	48385702	-	48384440	48385702	A3SS	0.5	50	50	ENSMUST00000034524.5	ENSMUSG00000032026.8	Rexo2	chr9	protein_coding	RNA exonuclease 2
chr9	48385670	48386420	-	48385813	48386420	A3SS&ES	0.33	50	50	ENSMUST00000034524.5	ENSMUSG00000032026.8	Rexo2	chr9	protein_coding	RNA exonuclease 2
chr9	48386199	48386420	-	48385813	48386420	A3SS	0.33	50	50	ENSMUST00000034524.5	ENSMUSG00000032026.8	Rexo2	chr9	protein_coding	RNA exonuclease 2
chr9	48385670	48386420	-	48386199	48386420	A3SS	0.33	50	50	ENSMUST00000213508.2	ENSMUSG00000032026.8	Rexo2	chr9	protein_coding	RNA exonuclease 2
chr9	48385670	48386420	-	48385670;48385813	48385761;48386420	ES	0.33	50	50	ENSMUST00000217037.2	ENSMUSG00000032026.8	Rexo2	chr9	protein_coding	RNA exonuclease 2
chr9	48385670;48386199	48385761;48386420	-	48385670	48386420	cassetteExon	0.5	100	100	ENSMUST00000216470.2	ENSMUSG00000032026.8	Rexo2	chr9	protein_coding	RNA exonuclease 2
chr9	48405481;48405687	48405583;48406455	-	48405481	48406455	cassetteExon	0.5	100	100	ENSMUST00000213276.2	ENSMUSG00000042396.11	Rbm7	chr9	protein_coding	RNA binding motif protein 7
chr9	48503662	48514654	-	48503662	48508294	5pMXE	0.33	50	50	ENSMUST00000136813.2	ENSMUSG00000032271.14	Nnmt	chr9	protein_coding	nicotinamide N-methyltransferase
chr9	48503662	48508523	-	48503662	48508294	A5SS	0.33	50	50	ENSMUST00000136813.2	ENSMUSG00000032271.14	Nnmt	chr9	protein_coding	nicotinamide N-methyltransferase
chr9	48503662	48508523	-	48503662	48514654	A5SS	0.33	50	50	ENSMUST00000034808.12	ENSMUSG00000032271.14	Nnmt	chr9	protein_coding	nicotinamide N-methyltransferase
chr9	48744399	48747354	-	48744399	48747088	5pMXE	0.5	50	50	ENSMUST00000093852.5	ENSMUSG00000066687.6	Zbtb16	chr9	protein_coding	zinc finger and BTB domain containing 16
chr9	48811308	48811861	-	48811290	48811861	A3SS	0.5	50	50	ENSMUST00000217289.2	ENSMUSG00000032269.9	Htr3a	chr9	protein_coding	5-hydroxytryptamine (serotonin) receptor 3A
chr9	48896837;48911728	48911651;48912808	+	48896837	48912808	cassetteExon	0.5	100	100	ENSMUST00000215788.2	ENSMUSG00000032267.9	Usp28	chr9	protein_coding	ubiquitin specific peptidase 28
chr9	48896837	48912808	+	48896837	48911651	3pMXE	0.5	50	50	ENSMUST00000216607.2	ENSMUSG00000032267.9	Usp28	chr9	protein_coding	ubiquitin specific peptidase 28
chr9	48929767	48935206	+	48929767	48935281	A3SS	0.5	50	50	ENSMUST00000213874.2	ENSMUSG00000032267.9	Usp28	chr9	protein_coding	ubiquitin specific peptidase 28
chr9	48943653	48943809	+	48943653	48946893	A3SS	0.5	50	50	ENSMUST00000213874.2	ENSMUSG00000032267.9	Usp28	chr9	protein_coding	ubiquitin specific peptidase 28
chr9	48944972	48946893	+	48943653	48946893	A5SS	0.5	50	50	ENSMUST00000213874.2	ENSMUSG00000032267.9	Usp28	chr9	protein_coding	ubiquitin specific peptidase 28
chr9	48947260	48948477	+	48947260	48950282	A3SS	0.5	50	50	ENSMUST00000215856.2	ENSMUSG00000032267.9	Usp28	chr9	protein_coding	ubiquitin specific peptidase 28
chr9	48949191	48950282	+	48947260	48950282	A5SS	0.5	50	50	ENSMUST00000215856.2	ENSMUSG00000032267.9	Usp28	chr9	protein_coding	ubiquitin specific peptidase 28
chr9	48981282	48982882	+	48981112	48982882	A5SS	0.5	50	50	ENSMUST00000034803.10	ENSMUSG00000032264.10	Zw10	chr9	protein_coding	zw10 kinetochore protein
chr9	49014123	49017371	+	49014123	49017414	A3SS	0.5	50	50	ENSMUST00000165088.8	ENSMUSG00000032268.14	Tmprss5	chr9	protein_coding	transmembrane protease, serine 5 (spinesin)
chr9	49017899	49018395	+	49017899	49018377	A3SS	0.5	50	50	ENSMUST00000165088.8	ENSMUSG00000032268.14	Tmprss5	chr9	protein_coding	transmembrane protease, serine 5 (spinesin)
chr9	49018499	49020312	+	49018499	49020302	A3SS	0.5	50	50	ENSMUST00000165088.8	ENSMUSG00000032268.14	Tmprss5	chr9	protein_coding	transmembrane protease, serine 5 (spinesin)
chr9	49020775	49022768	+	49020755	49022768	A5SS	0.5	50	50	ENSMUST00000165088.8	ENSMUSG00000032268.14	Tmprss5	chr9	protein_coding	transmembrane protease, serine 5 (spinesin)
chr9	49017516	49020302	+	49017516	49017801	3pMXE	0.5	50	50	ENSMUST00000171217.2	ENSMUSG00000032268.14	Tmprss5	chr9	protein_coding	transmembrane protease, serine 5 (spinesin)
chr9	49018499	49020302	+	49017516	49020302	A5SS	0.5	50	50	ENSMUST00000167095.8	ENSMUSG00000032268.14	Tmprss5	chr9	protein_coding	transmembrane protease, serine 5 (spinesin)
chr9	49457608;49461869	49461840;49468396	-	49457608	49468396	cassetteExon	0.5	100	100	ENSMUST00000193547.6	ENSMUSG00000039542.17	Ncam1	chr9	protein_coding	neural cell adhesion molecule 1
chr9	49418953	49419889	-	49416863	49419889	A3SS	0.5	50	50	ENSMUST00000193547.6	ENSMUSG00000039542.17	Ncam1	chr9	protein_coding	neural cell adhesion molecule 1
chr9	49428882	49431335	-	49421212	49431335	A3SS	0.5	50	50	ENSMUST00000193547.6	ENSMUSG00000039542.17	Ncam1	chr9	protein_coding	neural cell adhesion molecule 1
chr9	49431515	49434822	-	49431512	49434822	A3SS	0.5	50	50	ENSMUST00000193547.6	ENSMUSG00000039542.17	Ncam1	chr9	protein_coding	neural cell adhesion molecule 1
chr9	49443273	49454311	-	49434946	49454311	A3SS	0.33	50	50	ENSMUST00000193547.6	ENSMUSG00000039542.17	Ncam1	chr9	protein_coding	neural cell adhesion molecule 1
chr9	49453202	49454311	-	49434946	49454311	A3SS	0.33	50	50	ENSMUST00000193547.6	ENSMUSG00000039542.17	Ncam1	chr9	protein_coding	neural cell adhesion molecule 1
chr9	49553558	49709978	-	49481200	49709978	A3SS	0.5	50	50	ENSMUST00000193547.6	ENSMUSG00000039542.17	Ncam1	chr9	protein_coding	neural cell adhesion molecule 1
chr9	49416863	49418153	-	49416863	49419889	A5SS	0.5	50	50	ENSMUST00000193547.6	ENSMUSG00000039542.17	Ncam1	chr9	protein_coding	neural cell adhesion molecule 1
chr9	49434946	49443274	-	49434946	49454311	A5SS	0.33	50	50	ENSMUST00000193547.6	ENSMUSG00000039542.17	Ncam1	chr9	protein_coding	neural cell adhesion molecule 1
chr9	49434946	49446509	-	49434946	49454311	A5SS	0.33	50	50	ENSMUST00000193547.6	ENSMUSG00000039542.17	Ncam1	chr9	protein_coding	neural cell adhesion molecule 1
chr9	49416863	49419889	-	49416863;49418953	49418153;49419889	ES	0.5	50	50	ENSMUST00000194252.6	ENSMUSG00000039542.17	Ncam1	chr9	protein_coding	neural cell adhesion molecule 1
chr9	49448337	49453188	-	49443276	49453188	A3SS	0.5	50	50	ENSMUST00000194252.6	ENSMUSG00000039542.17	Ncam1	chr9	protein_coding	neural cell adhesion molecule 1
chr9	49434946	49446509	-	49434946	49443274	A5SS&ES	0.33	50	50	ENSMUST00000194252.6	ENSMUSG00000039542.17	Ncam1	chr9	protein_coding	neural cell adhesion molecule 1
chr9	49434946;49443276	49443274;49453188	-	49434946;49448337	49446509;49453188	MXE	0.5	100	100	ENSMUST00000194844.2	ENSMUSG00000039542.17	Ncam1	chr9	protein_coding	neural cell adhesion molecule 1
chr9	49443273	49454311	-	49453202	49454311	A3SS&ES	0.33	50	50	ENSMUST00000194844.2	ENSMUSG00000039542.17	Ncam1	chr9	protein_coding	neural cell adhesion molecule 1
chr9	49431556;49457643	49457447;49473367	+	49431556	49473367	cassetteExon	0.5	100	100	ENSMUST00000216483.2	ENSMUSG00000079564.4	Gm11149	chr9	lncRNA	predicted gene 11149
chr9	49431556;49472926	49472861;49473367	+	49431556	49473367	cassetteExon	0.5	100	100	ENSMUST00000216483.2	ENSMUSG00000079564.4	Gm11149	chr9	lncRNA	predicted gene 11149
chr9	49473532	49473868	+	49473532	49475313	A3SS	0.5	50	50	ENSMUST00000216483.2	ENSMUSG00000079564.4	Gm11149	chr9	lncRNA	predicted gene 11149
chr9	49473532	49482947	+	49473532	49473868	3pMXE	0.33	50	50	ENSMUST00000215465.2	ENSMUSG00000079564.4	Gm11149	chr9	lncRNA	predicted gene 11149
chr9	49431556;49457643	49457447;49473367	+	49431556;49472926	49472861;49473367	MXE	0.5	100	100	ENSMUST00000215465.2	ENSMUSG00000079564.4	Gm11149	chr9	lncRNA	predicted gene 11149
chr9	49473532	49475313	+	49473532	49482947	A3SS	0.33	50	50	ENSMUST00000215070.2	ENSMUSG00000079564.4	Gm11149	chr9	lncRNA	predicted gene 11149
chr9	50400787	50410226	-	50400787	50419002	A5SS	0.5	50	50	ENSMUST00000188703.2	ENSMUSG00000101304.2	Plet1os	chr9	lncRNA	placenta expressed transcript 1, opposite strand
chr9	50412428	50413022	+	50412428	50415577	A3SS	0.5	50	50	ENSMUST00000114474.8	ENSMUSG00000032068.15	Plet1	chr9	protein_coding	placenta expressed transcript 1
chr9	50438249;50439532	50439324;50439857	-	50438249	50439857	cassetteExon	0.5	100	100	ENSMUST00000034570.7	ENSMUSG00000032067.7	Pts	chr9	protein_coding	6-pyruvoyl-tetrahydropterin synthase
chr9	50438249;50439532	50439446;50439857	-	50438249	50439857	cassetteExon	0.5	100	100	ENSMUST00000034570.7	ENSMUSG00000032067.7	Pts	chr9	protein_coding	6-pyruvoyl-tetrahydropterin synthase
chr9	50436264	50436562	-	50436079	50436562	A3SS	0.5	50	50	ENSMUST00000034570.7	ENSMUSG00000032067.7	Pts	chr9	protein_coding	6-pyruvoyl-tetrahydropterin synthase
chr9	50438316	50439857	-	50438249	50439857	A3SS	0.25	50	50	ENSMUST00000034570.7	ENSMUSG00000032067.7	Pts	chr9	protein_coding	6-pyruvoyl-tetrahydropterin synthase
chr9	50436079	50436453	-	50436079	50436562	A5SS	0.33	50	50	ENSMUST00000034570.7	ENSMUSG00000032067.7	Pts	chr9	protein_coding	6-pyruvoyl-tetrahydropterin synthase
chr9	50436079	50439857	-	50438249	50439857	A3SS	0.25	50	50	ENSMUST00000213640.2	ENSMUSG00000032067.7	Pts	chr9	protein_coding	6-pyruvoyl-tetrahydropterin synthase
chr9	50438316	50439857	-	50436079	50439857	A3SS	0.25	50	50	ENSMUST00000215416.2	ENSMUSG00000032067.7	Pts	chr9	protein_coding	6-pyruvoyl-tetrahydropterin synthase
chr9	50439532	50439857	-	50436079	50439857	A3SS	0.25	50	50	ENSMUST00000215416.2	ENSMUSG00000032067.7	Pts	chr9	protein_coding	6-pyruvoyl-tetrahydropterin synthase
chr9	50436079	50436453	-	50436079	50439857	A5SS	0.33	50	50	ENSMUST00000215416.2	ENSMUSG00000032067.7	Pts	chr9	protein_coding	6-pyruvoyl-tetrahydropterin synthase
chr9	50436079	50436562	-	50436079	50439857	A5SS	0.33	50	50	ENSMUST00000215416.2	ENSMUSG00000032067.7	Pts	chr9	protein_coding	6-pyruvoyl-tetrahydropterin synthase
chr9	50439532	50439857	-	50438316	50439857	A3SS	0.25	50	50	ENSMUST00000214873.2	ENSMUSG00000032067.7	Pts	chr9	protein_coding	6-pyruvoyl-tetrahydropterin synthase
chr9	50438249	50439324	-	50438249	50439446	A5SS	0.33	50	50	ENSMUST00000214213.2	ENSMUSG00000032067.7	Pts	chr9	protein_coding	6-pyruvoyl-tetrahydropterin synthase
chr9	50438249	50439857	-	50438249	50439446	A5SS	0.33	50	50	ENSMUST00000216201.2	ENSMUSG00000032067.7	Pts	chr9	protein_coding	6-pyruvoyl-tetrahydropterin synthase
chr9	50486648;50488848	50488837;50489061	+	50486648;50488005	50487994;50489061	MXE	0.5	100	100	ENSMUST00000213916.2	ENSMUSG00000039217.14	Il18	chr9	protein_coding	interleukin 18
chr9	50489192;50490720	50490587;50492790	+	50489192	50492790	cassetteExon	0.5	100	100	ENSMUST00000213916.2	ENSMUSG00000039217.14	Il18	chr9	protein_coding	interleukin 18
chr9	50470598	50472526	-	50470585	50472526	A3SS	0.5	50	50	ENSMUST00000217236.2	ENSMUSG00000032065.7	Tex12	chr9	protein_coding	testis expressed 12
chr9	50526859;50527984	50527958;50528528	-	50526859	50528528	cassetteExon	0.5	100	100	ENSMUST00000131351.8	ENSMUSG00000059820.15	Nkapd1	chr9	protein_coding	NKAP domain containing 1
chr9	50526859	50528528	-	50526859	50527958	A5SS	0.5	50	50	ENSMUST00000145139.8	ENSMUSG00000059820.15	Nkapd1	chr9	protein_coding	NKAP domain containing 1
chr9	50528898;50529329	50529117;50529746	+	50528898	50529746	cassetteExon	0.5	100	100	ENSMUST00000000171.15	ENSMUSG00000000167.15	Pih1d2	chr9	protein_coding	PIH1 domain containing 2
chr9	50528898;50529556	50529117;50529746	+	50528898	50529746	cassetteExon	0.5	100	100	ENSMUST00000000171.15	ENSMUSG00000000167.15	Pih1d2	chr9	protein_coding	PIH1 domain containing 2
chr9	50531138	50532245	+	50531178	50532245	A5SS	0.5	50	50	ENSMUST00000000171.15	ENSMUSG00000000167.15	Pih1d2	chr9	protein_coding	PIH1 domain containing 2
chr9	50529949	50531055	+	50529949	50532921	A3SS	0.5	50	50	ENSMUST00000124029.2	ENSMUSG00000000167.15	Pih1d2	chr9	protein_coding	PIH1 domain containing 2
chr9	50532490	50532921	+	50529949	50532921	A5SS	0.5	50	50	ENSMUST00000124029.2	ENSMUSG00000000167.15	Pih1d2	chr9	protein_coding	PIH1 domain containing 2
chr9	50528898	50529746	+	50529556	50529746	A5SS&ES	0.33	50	50	ENSMUST00000151197.8	ENSMUSG00000000167.15	Pih1d2	chr9	protein_coding	PIH1 domain containing 2
chr9	50529329	50529746	+	50529556	50529746	A5SS&ES	0.33	50	50	ENSMUST00000151197.8	ENSMUSG00000000167.15	Pih1d2	chr9	protein_coding	PIH1 domain containing 2
chr9	50556406	50557270	-	50556406	50560932	A5SS	0.33	50	50	ENSMUST00000034567.4	ENSMUSG00000000168.11	Dlat	chr9	protein_coding	dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex)
chr9	50556406	50557405	-	50556406	50560932	A5SS	0.33	50	50	ENSMUST00000034567.4	ENSMUSG00000000168.11	Dlat	chr9	protein_coding	dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex)
chr9	50556406	50557270	-	50556406	50557405	A5SS	0.33	50	50	ENSMUST00000125919.8	ENSMUSG00000000168.11	Dlat	chr9	protein_coding	dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex)
chr9	50622272	50648944	-	50622272	50639086	5pMXE	0.5	50	50	ENSMUST00000034566.15	ENSMUSG00000032064.18	Dixdc1	chr9	protein_coding	DIX domain containing 1
chr9	50588281	50592787	-	50580855	50592787	A3SS	0.5	50	50	ENSMUST00000034566.15	ENSMUSG00000032064.18	Dixdc1	chr9	protein_coding	DIX domain containing 1
chr9	50606883	50608027	-	50606883	50613220	A5SS	0.2	50	50	ENSMUST00000034566.15	ENSMUSG00000032064.18	Dixdc1	chr9	protein_coding	DIX domain containing 1
chr9	50606883	50608890	-	50606883	50613220	A5SS	0.2	50	50	ENSMUST00000034566.15	ENSMUSG00000032064.18	Dixdc1	chr9	protein_coding	DIX domain containing 1
chr9	50606883	50609858	-	50606883	50613220	A5SS	0.2	50	50	ENSMUST00000034566.15	ENSMUSG00000032064.18	Dixdc1	chr9	protein_coding	DIX domain containing 1
chr9	50606883	50610666	-	50606883	50613220	A5SS	0.2	50	50	ENSMUST00000034566.15	ENSMUSG00000032064.18	Dixdc1	chr9	protein_coding	DIX domain containing 1
chr9	50617550	50622143	-	50617550	50622065	A5SS	0.5	50	50	ENSMUST00000034566.15	ENSMUSG00000032064.18	Dixdc1	chr9	protein_coding	DIX domain containing 1
chr9	50606883	50610666	-	50606883	50609858	5pMXE	0.2	50	50	ENSMUST00000141919.8	ENSMUSG00000032064.18	Dixdc1	chr9	protein_coding	DIX domain containing 1
chr9	50606883	50608027	-	50606883	50609858	A5SS	0.2	50	50	ENSMUST00000141919.8	ENSMUSG00000032064.18	Dixdc1	chr9	protein_coding	DIX domain containing 1
chr9	50606883	50608890	-	50606883	50609858	A5SS	0.2	50	50	ENSMUST00000141919.8	ENSMUSG00000032064.18	Dixdc1	chr9	protein_coding	DIX domain containing 1
chr9	50606883	50608890	-	50606883	50608027	5pMXE	0.2	50	50	ENSMUST00000119449.8	ENSMUSG00000032064.18	Dixdc1	chr9	protein_coding	DIX domain containing 1
chr9	50606883	50610666	-	50606883	50608027	5pMXE	0.2	50	50	ENSMUST00000119449.8	ENSMUSG00000032064.18	Dixdc1	chr9	protein_coding	DIX domain containing 1
chr9	50606883	50608890	-	50606883	50610666	A5SS	0.2	50	50	ENSMUST00000151109.8	ENSMUSG00000032064.18	Dixdc1	chr9	protein_coding	DIX domain containing 1
chr9	50662751	50663477	-	50663033	50663477	A3SS	0.5	50	50	ENSMUST00000042790.5	ENSMUSG00000038086.5	Hspb2	chr9	protein_coding	heat shock protein 2
chr9	50663247	50664381	+	50662876	50664381	A5SS	0.5	50	50	ENSMUST00000217475.2	ENSMUSG00000032060.11	Cryab	chr9	protein_coding	crystallin, alpha B
chr9	50664395	50664486	+	50664384	50664486	A5SS	0.5	50	50	ENSMUST00000214962.2	ENSMUSG00000032060.11	Cryab	chr9	protein_coding	crystallin, alpha B
chr9	50675590	50679158	-	50675590;50676226	50675996;50679158	ES	0.33	50	50	ENSMUST00000042468.9	ENSMUSG00000037971.11	1110032A03Rik	chr9	protein_coding	RIKEN cDNA 1110032A03 gene
chr9	50676226	50682101	-	50676226	50679158	5pMXE	0.2	50	50	ENSMUST00000042468.9	ENSMUSG00000037971.11	1110032A03Rik	chr9	protein_coding	RIKEN cDNA 1110032A03 gene
chr9	50676226;50676466	50676331;50679158	-	50676226	50679158	cassetteExon	0.5	100	100	ENSMUST00000042468.9	ENSMUSG00000037971.11	1110032A03Rik	chr9	protein_coding	RIKEN cDNA 1110032A03 gene
chr9	50675590	50676065	-	50675590	50675996	A5SS	0.33	50	50	ENSMUST00000042468.9	ENSMUSG00000037971.11	1110032A03Rik	chr9	protein_coding	RIKEN cDNA 1110032A03 gene
chr9	50676226	50677000	-	50676226	50679158	A5SS	0.2	50	50	ENSMUST00000042468.9	ENSMUSG00000037971.11	1110032A03Rik	chr9	protein_coding	RIKEN cDNA 1110032A03 gene
chr9	50676226	50679002	-	50676226	50679158	A5SS	0.2	50	50	ENSMUST00000042468.9	ENSMUSG00000037971.11	1110032A03Rik	chr9	protein_coding	RIKEN cDNA 1110032A03 gene
chr9	50675590;50676226	50676065;50679158	-	50675590	50679158	cassetteExon	0.5	100	100	ENSMUST00000177546.8	ENSMUSG00000037971.11	1110032A03Rik	chr9	protein_coding	RIKEN cDNA 1110032A03 gene
chr9	50675590;50676466	50675996;50679158	-	50675590	50679158	cassetteExon	0.5	100	100	ENSMUST00000177546.8	ENSMUSG00000037971.11	1110032A03Rik	chr9	protein_coding	RIKEN cDNA 1110032A03 gene
chr9	50675590;50676466	50676065;50679158	-	50675590	50679158	cassetteExon	0.5	100	100	ENSMUST00000177546.8	ENSMUSG00000037971.11	1110032A03Rik	chr9	protein_coding	RIKEN cDNA 1110032A03 gene
chr9	50676226	50679002	-	50676226	50677000	5pMXE	0.2	50	50	ENSMUST00000042576.11	ENSMUSG00000037971.11	1110032A03Rik	chr9	protein_coding	RIKEN cDNA 1110032A03 gene
chr9	50676226	50682101	-	50676226	50677000	5pMXE	0.2	50	50	ENSMUST00000042576.11	ENSMUSG00000037971.11	1110032A03Rik	chr9	protein_coding	RIKEN cDNA 1110032A03 gene
chr9	50676226	50676331	-	50676226	50677000	A5SS	0.2	50	50	ENSMUST00000042576.11	ENSMUSG00000037971.11	1110032A03Rik	chr9	protein_coding	RIKEN cDNA 1110032A03 gene
chr9	50680236	50682101	-	50676226	50682101	A3SS	0.5	50	50	ENSMUST00000176894.2	ENSMUSG00000037971.11	1110032A03Rik	chr9	protein_coding	RIKEN cDNA 1110032A03 gene
chr9	50676226	50676331	-	50676226	50682101	A5SS	0.2	50	50	ENSMUST00000176894.2	ENSMUSG00000037971.11	1110032A03Rik	chr9	protein_coding	RIKEN cDNA 1110032A03 gene
chr9	50676226	50679002	-	50676226	50682101	A5SS	0.2	50	50	ENSMUST00000176894.2	ENSMUSG00000037971.11	1110032A03Rik	chr9	protein_coding	RIKEN cDNA 1110032A03 gene
chr9	50676226	50676331	-	50676226	50679002	A5SS	0.2	50	50	ENSMUST00000177142.2	ENSMUSG00000037971.11	1110032A03Rik	chr9	protein_coding	RIKEN cDNA 1110032A03 gene
chr9	50681613	50682731	+	50681613;50682090	50681932;50682731	ES	0.5	50	50	ENSMUST00000042391.13	ENSMUSG00000037845.15	Fdxacb1	chr9	protein_coding	ferredoxin-fold anticodon binding domain containing 1
chr9	50680144	50681432	+	50680144	50681410	A3SS	0.5	50	50	ENSMUST00000042391.13	ENSMUSG00000037845.15	Fdxacb1	chr9	protein_coding	ferredoxin-fold anticodon binding domain containing 1
chr9	50681613	50682731	+	50682090	50682731	A5SS	0.5	50	50	ENSMUST00000176619.2	ENSMUSG00000037845.15	Fdxacb1	chr9	protein_coding	ferredoxin-fold anticodon binding domain containing 1
chr9	50690404	50699453	+	50690404;50694628	50694558;50699453	ES	0.33	50	50	ENSMUST00000034561.11	ENSMUSG00000032059.14	Alg9	chr9	protein_coding	asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase)
chr9	50717669	50733885	+	50717669;50720106	50719977;50733885	ES	0.5	50	50	ENSMUST00000034561.11	ENSMUSG00000032059.14	Alg9	chr9	protein_coding	asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase)
chr9	50720106	50754034	+	50720106;50734015	50733885;50754034	ES	0.25	50	50	ENSMUST00000034561.11	ENSMUSG00000032059.14	Alg9	chr9	protein_coding	asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase)
chr9	50694628;50698982	50698881;50699453	+	50694628	50699453	cassetteExon	0.5	100	100	ENSMUST00000034561.11	ENSMUSG00000032059.14	Alg9	chr9	protein_coding	asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase)
chr9	50687283	50687844	+	50686818	50687844	A5SS	0.33	50	50	ENSMUST00000034561.11	ENSMUSG00000032059.14	Alg9	chr9	protein_coding	asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase)
chr9	50687723	50687844	+	50686818	50687844	A5SS	0.33	50	50	ENSMUST00000034561.11	ENSMUSG00000032059.14	Alg9	chr9	protein_coding	asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase)
chr9	50734382	50754034	+	50734015	50754034	A5SS	0.25	50	50	ENSMUST00000034561.11	ENSMUSG00000032059.14	Alg9	chr9	protein_coding	asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase)
chr9	50746977	50754034	+	50734015	50754034	A5SS	0.25	50	50	ENSMUST00000034561.11	ENSMUSG00000032059.14	Alg9	chr9	protein_coding	asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase)
chr9	50698982	50699453	+	50690404	50699453	A5SS	0.33	50	50	ENSMUST00000162073.8	ENSMUSG00000032059.14	Alg9	chr9	protein_coding	asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase)
chr9	50690404	50699453	+	50690404	50694558	3pMXE	0.5	50	50	ENSMUST00000162363.8	ENSMUSG00000032059.14	Alg9	chr9	protein_coding	asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase)
chr9	50687723	50687844	+	50687283	50687844	A5SS	0.33	50	50	ENSMUST00000162363.8	ENSMUSG00000032059.14	Alg9	chr9	protein_coding	asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase)
chr9	50717669;50720106	50719977;50754034	+	50717669;50734015	50733885;50754034	MXE	0.5	100	100	ENSMUST00000177320.2	ENSMUSG00000032059.14	Alg9	chr9	protein_coding	asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase)
chr9	50720106;50734382	50733885;50754034	+	50720106	50754034	cassetteExon	0.5	100	100	ENSMUST00000175728.2	ENSMUSG00000032059.14	Alg9	chr9	protein_coding	asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase)
chr9	50746977	50754034	+	50720106	50754034	A5SS	0.25	50	50	ENSMUST00000175728.2	ENSMUSG00000032059.14	Alg9	chr9	protein_coding	asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase)
chr9	50720106	50754034	+	50734382	50754034	5pMXE	0.25	50	50	ENSMUST00000161200.2	ENSMUSG00000032059.14	Alg9	chr9	protein_coding	asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase)
chr9	50746977	50754034	+	50734382	50754034	A5SS	0.25	50	50	ENSMUST00000161200.2	ENSMUSG00000032059.14	Alg9	chr9	protein_coding	asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase)
chr9	50770251	50777744	+	50770251	50772831	3pMXE	0.33	50	50	ENSMUST00000174555.2	ENSMUSG00000032058.15	Ppp2r1b	chr9	protein_coding	protein phosphatase 2, regulatory subunit A, beta
chr9	50770251	50772593	+	50770251	50772831	A3SS	0.33	50	50	ENSMUST00000174555.2	ENSMUSG00000032058.15	Ppp2r1b	chr9	protein_coding	protein phosphatase 2, regulatory subunit A, beta
chr9	50768398	50769136	+	50756706	50769136	A5SS	0.5	50	50	ENSMUST00000174555.2	ENSMUSG00000032058.15	Ppp2r1b	chr9	protein_coding	protein phosphatase 2, regulatory subunit A, beta
chr9	50768398	50772831	+	50770251	50772831	A5SS&ES	0.5	50	50	ENSMUST00000174555.2	ENSMUSG00000032058.15	Ppp2r1b	chr9	protein_coding	protein phosphatase 2, regulatory subunit A, beta
chr9	50778696	50781363	+	50778696;50779097	50778963;50781363	ES	0.5	50	50	ENSMUST00000174628.8	ENSMUSG00000032058.15	Ppp2r1b	chr9	protein_coding	protein phosphatase 2, regulatory subunit A, beta
chr9	50794895	50803956	+	50794895;50803017	50802937;50803956	ES	0.5	50	50	ENSMUST00000174628.8	ENSMUSG00000032058.15	Ppp2r1b	chr9	protein_coding	protein phosphatase 2, regulatory subunit A, beta
chr9	50770251;50772764	50772593;50773666	+	50770251;50773063	50772831;50773666	MXE	0.5	100	100	ENSMUST00000174628.8	ENSMUSG00000032058.15	Ppp2r1b	chr9	protein_coding	protein phosphatase 2, regulatory subunit A, beta
chr9	50781536;50784608	50784497;50784947	+	50781536	50784947	cassetteExon	0.5	100	100	ENSMUST00000174628.8	ENSMUSG00000032058.15	Ppp2r1b	chr9	protein_coding	protein phosphatase 2, regulatory subunit A, beta
chr9	50790601	50791139	+	50790601	50794774	A3SS	0.5	50	50	ENSMUST00000174628.8	ENSMUSG00000032058.15	Ppp2r1b	chr9	protein_coding	protein phosphatase 2, regulatory subunit A, beta
chr9	50794895	50802917	+	50794895	50802937	A3SS	0.33	50	50	ENSMUST00000174628.8	ENSMUSG00000032058.15	Ppp2r1b	chr9	protein_coding	protein phosphatase 2, regulatory subunit A, beta
chr9	50794895	50803956	+	50794895;50803017	50802917;50803956	ES	0.5	50	50	ENSMUST00000034560.14	ENSMUSG00000032058.15	Ppp2r1b	chr9	protein_coding	protein phosphatase 2, regulatory subunit A, beta
chr9	50768398	50769136	+	50768398	50772831	A3SS	0.5	50	50	ENSMUST00000176349.8	ENSMUSG00000032058.15	Ppp2r1b	chr9	protein_coding	protein phosphatase 2, regulatory subunit A, beta
chr9	50770251	50777744	+	50773813	50777744	A5SS&ES	0.5	50	50	ENSMUST00000176349.8	ENSMUSG00000032058.15	Ppp2r1b	chr9	protein_coding	protein phosphatase 2, regulatory subunit A, beta
chr9	50772764	50773666	+	50773063	50773666	A5SS&ES	0.5	50	50	ENSMUST00000176349.8	ENSMUSG00000032058.15	Ppp2r1b	chr9	protein_coding	protein phosphatase 2, regulatory subunit A, beta
chr9	50770251	50772593	+	50770251	50777744	A3SS	0.33	50	50	ENSMUST00000175640.8	ENSMUSG00000032058.15	Ppp2r1b	chr9	protein_coding	protein phosphatase 2, regulatory subunit A, beta
chr9	50768398;50773063	50772831;50773666	+	50768398;50772764	50769136;50773666	MXE	0.5	100	100	ENSMUST00000175926.8	ENSMUSG00000032058.15	Ppp2r1b	chr9	protein_coding	protein phosphatase 2, regulatory subunit A, beta
chr9	50839588	50846716	-	50828952	50846716	A3SS	0.33	50	50	ENSMUST00000176824.8	ENSMUSG00000037112.17	Sik2	chr9	protein_coding	salt inducible kinase 2
chr9	50844265	50846716	-	50828952	50846716	A3SS	0.33	50	50	ENSMUST00000176824.8	ENSMUSG00000037112.17	Sik2	chr9	protein_coding	salt inducible kinase 2
chr9	50804689	50806644	-	50805381	50806644	A3SS	0.5	50	50	ENSMUST00000176663.8	ENSMUSG00000037112.17	Sik2	chr9	protein_coding	salt inducible kinase 2
chr9	50804689	50806644	-	50804689;50805381	50805258;50806644	ES	0.5	50	50	ENSMUST00000176491.8	ENSMUSG00000037112.17	Sik2	chr9	protein_coding	salt inducible kinase 2
chr9	50844265	50846716	-	50839588	50846716	A3SS	0.33	50	50	ENSMUST00000068484.16	ENSMUSG00000037112.17	Sik2	chr9	protein_coding	salt inducible kinase 2
chr9	50985445	50988186	-	50985445;50987645	50987622;50988186	ES	0.5	50	50	ENSMUST00000217212.2	ENSMUSG00000060594.7	Layn	chr9	protein_coding	layilin
chr9	50982835	50985148	-	50979496	50985148	A3SS	0.5	50	50	ENSMUST00000217212.2	ENSMUSG00000060594.7	Layn	chr9	protein_coding	layilin
chr9	50972254	50979869	+	50972254	51024629	A3SS	0.5	50	50	ENSMUST00000214452.2	ENSMUSG00000032056.11	Btg4	chr9	protein_coding	BTG anti-proliferation factor 4
chr9	51017273	51024629	+	50972254	51024629	A5SS	0.5	50	50	ENSMUST00000214452.2	ENSMUSG00000032056.11	Btg4	chr9	protein_coding	BTG anti-proliferation factor 4
chr9	51188990	51190876	-	51188990	51189649	5pMXE	0.33	50	50	ENSMUST00000215038.3	ENSMUSG00000079559.6	Colca2	chr9	protein_coding	COLCA2 homolog
chr9	51188990	51189640	-	51188990	51189649	A5SS	0.33	50	50	ENSMUST00000215038.3	ENSMUSG00000079559.6	Colca2	chr9	protein_coding	COLCA2 homolog
chr9	51188990	51190876	-	51188990	51189640	5pMXE	0.33	50	50	ENSMUST00000114427.4	ENSMUSG00000079559.6	Colca2	chr9	protein_coding	COLCA2 homolog
chr9	51206299	51229581	-	51206299	51223851	5pMXE	0.5	50	50	ENSMUST00000181366.3	ENSMUSG00000036027.14	1810046K07Rik	chr9	protein_coding	RIKEN cDNA 1810046K07 gene
chr9	51229690	51240108	-	51229683	51240108	A3SS	0.5	50	50	ENSMUST00000039959.11	ENSMUSG00000036027.14	1810046K07Rik	chr9	protein_coding	RIKEN cDNA 1810046K07 gene
chr9	51677144	51697036	+	51676911	51697036	A5SS	0.5	50	50	ENSMUST00000124907.2	ENSMUSG00000053199.14	Arhgap20	chr9	protein_coding	Rho GTPase activating protein 20
chr9	51727453	51727977	+	51697118	51727977	A5SS	0.5	50	50	ENSMUST00000146509.8	ENSMUSG00000053199.14	Arhgap20	chr9	protein_coding	Rho GTPase activating protein 20
chr9	51755075	51757541	+	51755075	51757425	A3SS	0.5	50	50	ENSMUST00000065496.12	ENSMUSG00000053199.14	Arhgap20	chr9	protein_coding	Rho GTPase activating protein 20
chr9	51752345	51787003	-	51752345	51753940	A5SS&ES	0.5	50	50	ENSMUST00000152203.8	ENSMUSG00000074354.12	Arhgap20os	chr9	lncRNA	Rho GTPase activating protein 20, opposite strand
chr9	51754002	51786910	-	51754002	51787031	A5SS	0.33	50	50	ENSMUST00000152203.8	ENSMUSG00000074354.12	Arhgap20os	chr9	lncRNA	Rho GTPase activating protein 20, opposite strand
chr9	51754002	51787003	-	51754002	51787031	A5SS	0.33	50	50	ENSMUST00000152203.8	ENSMUSG00000074354.12	Arhgap20os	chr9	lncRNA	Rho GTPase activating protein 20, opposite strand
chr9	51752345	51787003	-	51752345;51754002	51753940;51787003	ES	0.5	50	50	ENSMUST00000125400.8	ENSMUSG00000074354.12	Arhgap20os	chr9	lncRNA	Rho GTPase activating protein 20, opposite strand
chr9	51754002	51786910	-	51754002	51787003	A5SS	0.33	50	50	ENSMUST00000125400.8	ENSMUSG00000074354.12	Arhgap20os	chr9	lncRNA	Rho GTPase activating protein 20, opposite strand
chr9	51825859	51835402	+	51825859	51826995	3pMXE	0.33	50	50	ENSMUST00000213467.2	ENSMUSG00000111836.2	4933407I05Rik	chr9	lncRNA	RIKEN cDNA 4933407I05 gene
chr9	51825859	51835850	+	51825859	51826995	3pMXE	0.33	50	50	ENSMUST00000213467.2	ENSMUSG00000111836.2	4933407I05Rik	chr9	lncRNA	RIKEN cDNA 4933407I05 gene
chr9	51825859;51835637	51835402;51835850	+	51825859	51835850	cassetteExon	0.5	100	100	ENSMUST00000214646.2	ENSMUSG00000111836.2	4933407I05Rik	chr9	lncRNA	RIKEN cDNA 4933407I05 gene
chr9	51854949;51858497	51858315;51859877	-	51854949	51859877	cassetteExon	0.5	100	100	ENSMUST00000034552.8	ENSMUSG00000032051.10	Fdx1	chr9	protein_coding	ferredoxin 1
chr9	51854949	51859877	-	51858497	51859877	3pMXE	0.5	50	50	ENSMUST00000214013.2	ENSMUSG00000032051.10	Fdx1	chr9	protein_coding	ferredoxin 1
chr9	51984584	51986285	+	51984584	51992319	A3SS	0.5	50	50	ENSMUST00000163153.9	ENSMUSG00000032050.19	Rdx	chr9	protein_coding	radixin
chr9	51959732	51972132	+	51958535	51972132	A5SS	0.5	50	50	ENSMUST00000163153.9	ENSMUSG00000032050.19	Rdx	chr9	protein_coding	radixin
chr9	52055726	52079331	-	52055726	52079802	A5SS	0.5	50	50	ENSMUST00000213645.2	ENSMUSG00000035164.9	Zc3h12c	chr9	protein_coding	zinc finger CCCH type containing 12C
chr9	52313459	52327121	+	52313459	52334870	A3SS	0.5	50	50	ENSMUST00000215193.2	ENSMUSG00000111520.2	Gm33125	chr9	lncRNA	predicted gene, 33125
chr9	52589817	52590589	-	52589817	52590883	A5SS	0.5	50	50	ENSMUST00000213937.2	ENSMUSG00000078307.4	AI593442	chr9	protein_coding	expressed sequence AI593442
chr9	53252770	53264454	+	53251798	53264454	A5SS	0.5	50	50	ENSMUST00000051014.2	ENSMUSG00000034584.4	Exph5	chr9	protein_coding	exophilin 5
chr9	53303431	53305236	+	53303431	53310987	A3SS	0.5	50	50	ENSMUST00000214164.2	ENSMUSG00000034487.5	Poglut3	chr9	protein_coding	protein O-glucosyltransferase 3
chr9	53309324	53310987	+	53303431	53310987	A5SS	0.5	50	50	ENSMUST00000214164.2	ENSMUSG00000034487.5	Poglut3	chr9	protein_coding	protein O-glucosyltransferase 3
chr9	53316721	53325639	+	53314755	53325639	A5SS	0.33	50	50	ENSMUST00000215668.2	ENSMUSG00000005131.5	4930550C14Rik	chr9	protein_coding	RIKEN cDNA 4930550C14 gene
chr9	53323139	53325639	+	53314755	53325639	A5SS	0.33	50	50	ENSMUST00000215668.2	ENSMUSG00000005131.5	4930550C14Rik	chr9	protein_coding	RIKEN cDNA 4930550C14 gene
chr9	53316721	53325639	+	53323139	53325639	A5SS&ES	0.5	50	50	ENSMUST00000005262.2	ENSMUSG00000005131.5	4930550C14Rik	chr9	protein_coding	RIKEN cDNA 4930550C14 gene
chr9	53372310;53372420	53372412;53373781	-	53372310	53373781	cassetteExon	0.5	100	100	ENSMUST00000118282.9	ENSMUSG00000034218.17	Atm	chr9	protein_coding	ataxia telangiectasia mutated
chr9	53361934	53362960	-	53361934	53362849	A5SS	0.5	50	50	ENSMUST00000118282.9	ENSMUSG00000034218.17	Atm	chr9	protein_coding	ataxia telangiectasia mutated
chr9	53569980	53581151	-	53569980	53578338	5pMXE	0.5	50	50	ENSMUST00000166367.8	ENSMUSG00000032030.17	Cul5	chr9	protein_coding	cullin 5
chr9	53546365;53553898	53553818;53553981	-	53546365	53553981	cassetteExon	0.5	100	100	ENSMUST00000166367.8	ENSMUSG00000032030.17	Cul5	chr9	protein_coding	cullin 5
chr9	53566671;53567023	53566954;53569871	-	53566671	53569871	cassetteExon	0.5	100	100	ENSMUST00000166367.8	ENSMUSG00000032030.17	Cul5	chr9	protein_coding	cullin 5
chr9	53566671;53569485	53569258;53569871	-	53566671	53569871	cassetteExon	0.5	100	100	ENSMUST00000166367.8	ENSMUSG00000032030.17	Cul5	chr9	protein_coding	cullin 5
chr9	53566671;53567023	53566954;53569871	-	53566671;53569485	53569258;53569871	MXE	0.5	100	100	ENSMUST00000120122.8	ENSMUSG00000032030.17	Cul5	chr9	protein_coding	cullin 5
chr9	53546365	53553981	-	53546365	53553818	A5SS	0.5	50	50	ENSMUST00000123499.8	ENSMUSG00000032030.17	Cul5	chr9	protein_coding	cullin 5
chr9	53833383	53838739	-	53828657	53838739	A3SS	0.5	50	50	ENSMUST00000215313.2	ENSMUSG00000041986.17	Elmod1	chr9	protein_coding	ELMO/CED-12 domain containing 1
chr9	53843159	53854132	-	53843197	53854132	A3SS	0.5	50	50	ENSMUST00000215313.2	ENSMUSG00000041986.17	Elmod1	chr9	protein_coding	ELMO/CED-12 domain containing 1
chr9	53828657	53831684	-	53828657	53838739	A5SS	0.5	50	50	ENSMUST00000215313.2	ENSMUSG00000041986.17	Elmod1	chr9	protein_coding	ELMO/CED-12 domain containing 1
chr9	53843159	53854132	-	53843159	53844102	5pMXE	0.5	50	50	ENSMUST00000166580.2	ENSMUSG00000041986.17	Elmod1	chr9	protein_coding	ELMO/CED-12 domain containing 1
chr9	53974820	53975503	-	53934921	53975503	A3SS	0.5	50	50	ENSMUST00000098760.5	ENSMUSG00000074345.5	Tnfaip8l3	chr9	protein_coding	tumor necrosis factor, alpha-induced protein 8-like 3
chr9	54100700	54109265	-	54100700	54175356	A5SS	0.5	50	50	ENSMUST00000214358.2	ENSMUSG00000032274.10	Cyp19a1	chr9	protein_coding	cytochrome P450, family 19, subfamily a, polypeptide 1
chr9	54286287	54288192	-	54286287;54287121	54287059;54288192	ES	0.5	50	50	ENSMUST00000118163.8	ENSMUSG00000041268.18	Dmxl2	chr9	protein_coding	Dmx-like 2
chr9	54384812	54408635	-	54384812;54387749	54387624;54408635	ES	0.5	50	50	ENSMUST00000118163.8	ENSMUSG00000041268.18	Dmxl2	chr9	protein_coding	Dmx-like 2
chr9	54303651	54305331	-	54303654	54305331	A3SS	0.5	50	50	ENSMUST00000118163.8	ENSMUSG00000041268.18	Dmxl2	chr9	protein_coding	Dmx-like 2
chr9	54381199	54381349	-	54381199	54384741	A5SS	0.5	50	50	ENSMUST00000118163.8	ENSMUSG00000041268.18	Dmxl2	chr9	protein_coding	Dmx-like 2
chr9	54446413	54446735	+	54446413	54446662	A3SS	0.5	50	50	ENSMUST00000118413.3	ENSMUSG00000046460.16	Sh2d7	chr9	protein_coding	SH2 domain containing 7
chr9	54497204;54499539	54499445;54499678	+	54497204	54499678	cassetteExon	0.5	100	100	ENSMUST00000217484.2	ENSMUSG00000032279.12	Idh3a	chr9	protein_coding	isocitrate dehydrogenase 3 (NAD+) alpha
chr9	54549980;54550921	54550823;54568833	-	54549980	54568833	cassetteExon	0.5	100	100	ENSMUST00000034822.12	ENSMUSG00000032281.12	Acsbg1	chr9	protein_coding	acyl-CoA synthetase bubblegum family member 1
chr9	54549980	54550292	-	54549980	54568833	A5SS	0.33	50	50	ENSMUST00000034822.12	ENSMUSG00000032281.12	Acsbg1	chr9	protein_coding	acyl-CoA synthetase bubblegum family member 1
chr9	54549980	54550823	-	54549980	54550292	5pMXE	0.33	50	50	ENSMUST00000138315.2	ENSMUSG00000032281.12	Acsbg1	chr9	protein_coding	acyl-CoA synthetase bubblegum family member 1
chr9	54550921	54553553	-	54550921	54568833	A5SS	0.5	50	50	ENSMUST00000128624.2	ENSMUSG00000032281.12	Acsbg1	chr9	protein_coding	acyl-CoA synthetase bubblegum family member 1
chr9	54606924	54607006	+	54606697	54607006	A5SS	0.5	50	50	ENSMUST00000120452.8	ENSMUSG00000032285.16	Dnaja4	chr9	protein_coding	DnaJ heat shock protein family (Hsp40) member A4
chr9	54624719	54626535	-	54624409	54626535	A3SS	0.5	50	50	ENSMUST00000118771.8	ENSMUSG00000061559.16	Wdr61	chr9	protein_coding	WD repeat domain 61
chr9	54637940	54638671	-	54637945	54638671	A3SS	0.5	50	50	ENSMUST00000118771.8	ENSMUSG00000061559.16	Wdr61	chr9	protein_coding	WD repeat domain 61
chr9	54638721	54641759	-	54638721	54641653	A5SS	0.5	50	50	ENSMUST00000118771.8	ENSMUSG00000061559.16	Wdr61	chr9	protein_coding	WD repeat domain 61
chr9	54807856;54810523	54810464;54811175	+	54807856	54811175	cassetteExon	0.5	100	100	ENSMUST00000034843.9	ENSMUSG00000032293.9	Ireb2	chr9	protein_coding	iron responsive element binding protein 2
chr9	54825142	54825531	+	54825142	54827758	A3SS	0.5	50	50	ENSMUST00000039742.8	ENSMUSG00000035878.14	Hykk	chr9	protein_coding	hydroxylysine kinase 1
chr9	54829618	54837979	+	54829618	54844423	A3SS	0.5	50	50	ENSMUST00000039742.8	ENSMUSG00000035878.14	Hykk	chr9	protein_coding	hydroxylysine kinase 1
chr9	54859392	54859963	+	54859392;54859667	54859625;54859963	ES	0.5	50	50	ENSMUST00000034848.14	ENSMUSG00000032301.14	Psma4	chr9	protein_coding	proteasome subunit alpha 4
chr9	54858187;54858712	54858628;54859366	+	54858187	54859366	cassetteExon	0.5	100	100	ENSMUST00000034848.14	ENSMUSG00000032301.14	Psma4	chr9	protein_coding	proteasome subunit alpha 4
chr9	54859392	54859963	+	54859667	54859963	A5SS	0.5	50	50	ENSMUST00000171578.8	ENSMUSG00000032301.14	Psma4	chr9	protein_coding	proteasome subunit alpha 4
chr9	54858187	54859366	+	54858712	54859366	5pMXE	0.5	50	50	ENSMUST00000171900.2	ENSMUSG00000032301.14	Psma4	chr9	protein_coding	proteasome subunit alpha 4
chr9	54888531	54905296	+	54888399	54905296	A5SS	0.33	50	50	ENSMUST00000093844.5	ENSMUSG00000035594.11	Chrna5	chr9	protein_coding	cholinergic receptor, nicotinic, alpha polypeptide 5
chr9	54889005	54905296	+	54888399	54905296	A5SS	0.33	50	50	ENSMUST00000093844.5	ENSMUSG00000035594.11	Chrna5	chr9	protein_coding	cholinergic receptor, nicotinic, alpha polypeptide 5
chr9	54889005	54905296	+	54888531	54905296	A5SS	0.33	50	50	ENSMUST00000216865.2	ENSMUSG00000035594.11	Chrna5	chr9	protein_coding	cholinergic receptor, nicotinic, alpha polypeptide 5
chr9	54889005	54905296	+	54889005	54911620	A3SS	0.5	50	50	ENSMUST00000217408.2	ENSMUSG00000035594.11	Chrna5	chr9	protein_coding	cholinergic receptor, nicotinic, alpha polypeptide 5
chr9	55070353	55083475	+	55070353;55075591	55075487;55083475	ES	0.5	50	50	ENSMUST00000059555.15	ENSMUSG00000032307.17	Ube2q2	chr9	protein_coding	ubiquitin-conjugating enzyme E2Q family member 2
chr9	55057685	55070252	+	55057110	55070252	A5SS	0.5	50	50	ENSMUST00000059555.15	ENSMUSG00000032307.17	Ube2q2	chr9	protein_coding	ubiquitin-conjugating enzyme E2Q family member 2
chr9	55122282	55125718	+	55122282	55125599	A3SS	0.5	50	50	ENSMUST00000034859.15	ENSMUSG00000032309.16	Fbxo22	chr9	protein_coding	F-box protein 22
chr9	55116402	55116637	+	55116472	55116637	A5SS	0.5	50	50	ENSMUST00000034859.15	ENSMUSG00000032309.16	Fbxo22	chr9	protein_coding	F-box protein 22
chr9	55121065	55121193	+	55116775	55121193	A5SS	0.5	50	50	ENSMUST00000034859.15	ENSMUSG00000032309.16	Fbxo22	chr9	protein_coding	F-box protein 22
chr9	55156453	55190781	-	55156453;55189900	55189835;55190781	ES	0.5	50	50	ENSMUST00000139261.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55189900	55226877	-	55189900	55190781	5pMXE	0.5	50	50	ENSMUST00000139261.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55143803;55146778	55146716;55149345	-	55143803	55149345	cassetteExon	0.5	100	100	ENSMUST00000139261.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55156453;55165908	55165761;55189835	-	55156453	55189835	cassetteExon	0.5	100	100	ENSMUST00000139261.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55149491;55188267	55188174;55189835	-	55149491;55156453	55156380;55189835	MXE	0.5	100	100	ENSMUST00000139261.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55156453;55188267	55188174;55189835	-	55156453	55189835	cassetteExon	0.5	100	100	ENSMUST00000139261.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55132876	55133900	-	55128692	55133900	A3SS	0.5	50	50	ENSMUST00000139261.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55134000	55135137	-	55134038	55135137	A3SS	0.5	50	50	ENSMUST00000139261.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55149491	55149664	-	55149491	55156380	A5SS	0.33	50	50	ENSMUST00000139261.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55149491;55156453	55156380;55188174	-	55149491	55188174	cassetteExon	0.5	100	100	ENSMUST00000164721.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55149491;55156453	55156380;55190781	-	55149491;55189900	55188174;55190781	MXE	0.5	100	100	ENSMUST00000164721.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55165908	55189835	-	55188267	55189835	A3SS&ES	0.33	50	50	ENSMUST00000164721.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55166764	55188174	-	55149491	55188174	A3SS	0.33	50	50	ENSMUST00000164721.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55149491	55149664	-	55149491	55188174	A5SS	0.33	50	50	ENSMUST00000164721.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55188267	55189825	-	55188267	55189835	A5SS	0.5	50	50	ENSMUST00000164721.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55149491	55226877	-	55149491	55149664	5pMXE	0.25	50	50	ENSMUST00000144939.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55166764	55189825	-	55166764	55188174	A5SS&ES	0.5	50	50	ENSMUST00000145784.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55213746	55226877	-	55189900	55226877	A3SS	0.33	50	50	ENSMUST00000130158.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55226986	55227213	-	55226986	55233864	A5SS	0.5	50	50	ENSMUST00000130158.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55166764	55188174	-	55156453	55188174	A3SS	0.33	50	50	ENSMUST00000137675.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55166764	55189825	-	55188267	55189825	A3SS&ES	0.5	50	50	ENSMUST00000137675.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55156453	55165761	-	55156453	55188174	A5SS	0.25	50	50	ENSMUST00000137675.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55156453	55189835	-	55156453	55188174	A5SS&ES	0.25	50	50	ENSMUST00000137675.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55149491	55188174	-	55149491	55156380	A5SS&ES	0.33	50	50	ENSMUST00000126368.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55156453	55165761	-	55156453	55190781	A5SS	0.25	50	50	ENSMUST00000126368.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55156453	55188174	-	55156453	55190781	A5SS	0.25	50	50	ENSMUST00000126368.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55189900	55226877	-	55149491	55226877	A3SS	0.33	50	50	ENSMUST00000156112.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55213746	55226877	-	55149491	55226877	A3SS	0.33	50	50	ENSMUST00000156112.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55149491	55156380	-	55149491	55226877	A5SS	0.25	50	50	ENSMUST00000156112.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55149491	55188174	-	55149491	55226877	A5SS	0.25	50	50	ENSMUST00000156112.8	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55156453;55188267	55188174;55189835	-	55156453;55165908	55165761;55189835	MXE	0.5	100	100	ENSMUST00000128020.2	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55165908	55166656	-	55165908	55189835	A5SS	0.5	50	50	ENSMUST00000128020.2	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55166764;55188267	55188174;55189825	-	55166764	55189825	cassetteExon	0.5	100	100	ENSMUST00000134183.2	ENSMUSG00000032311.18	Nrg4	chr9	protein_coding	neuregulin 4
chr9	55288151	55305025	+	55288151;55303907	55303788;55305025	ES	0.5	50	50	ENSMUST00000085754.10	ENSMUSG00000032313.12	Tmem266	chr9	protein_coding	transmembrane protein 266
chr9	55240781	55284764	+	55234284	55284764	A5SS	0.5	50	50	ENSMUST00000085754.10	ENSMUSG00000032313.12	Tmem266	chr9	protein_coding	transmembrane protein 266
chr9	55407448;55408430	55408276;55419315	-	55407448	55419315	cassetteExon	0.5	100	100	ENSMUST00000034866.9	ENSMUSG00000032314.15	Etfa	chr9	protein_coding	electron transferring flavoprotein, alpha polypeptide
chr9	55381939	55389557	-	55372143	55389557	A3SS	0.5	50	50	ENSMUST00000034866.9	ENSMUSG00000032314.15	Etfa	chr9	protein_coding	electron transferring flavoprotein, alpha polypeptide
chr9	55394080	55394684	-	55394087	55394684	A3SS	0.5	50	50	ENSMUST00000034866.9	ENSMUSG00000032314.15	Etfa	chr9	protein_coding	electron transferring flavoprotein, alpha polypeptide
chr9	55407448	55418931	-	55407448	55419315	A5SS	0.33	50	50	ENSMUST00000034866.9	ENSMUSG00000032314.15	Etfa	chr9	protein_coding	electron transferring flavoprotein, alpha polypeptide
chr9	55407448	55418931	-	55407448	55408276	A5SS&ES	0.33	50	50	ENSMUST00000153186.8	ENSMUSG00000032314.15	Etfa	chr9	protein_coding	electron transferring flavoprotein, alpha polypeptide
chr9	55449573	55451360	+	55449573	55449681	3pMXE	0.5	50	50	ENSMUST00000175950.8	ENSMUSG00000032318.13	Isl2	chr9	protein_coding	insulin related protein 2 (islet 2)
chr9	55448622	55449384	+	55446228	55449384	A5SS	0.5	50	50	ENSMUST00000175950.8	ENSMUSG00000032318.13	Isl2	chr9	protein_coding	insulin related protein 2 (islet 2)
chr9	55449573	55451360	+	55449573;55449943	55449681;55451360	ES	0.5	50	50	ENSMUST00000034869.11	ENSMUSG00000032318.13	Isl2	chr9	protein_coding	insulin related protein 2 (islet 2)
chr9	55451648	55452225	+	55451643	55452225	A5SS	0.5	50	50	ENSMUST00000034869.11	ENSMUSG00000032318.13	Isl2	chr9	protein_coding	insulin related protein 2 (islet 2)
chr9	55449573	55451360	+	55449943	55451360	5pMXE	0.5	50	50	ENSMUST00000165302.2	ENSMUSG00000032318.13	Isl2	chr9	protein_coding	insulin related protein 2 (islet 2)
chr9	55447250	55447800	-	55447220	55447800	A3SS	0.5	50	50	ENSMUST00000171441.2	ENSMUSG00000090270.2	Gm17226	chr9	lncRNA	predicted gene 17226
chr9	55669648	55699452	-	55669648	55714297	A5SS	0.33	50	50	ENSMUST00000214747.2	ENSMUSG00000034007.11	Scaper	chr9	protein_coding	S phase cyclin A-associated protein in the ER
chr9	55767202	55771670	-	55767202	55771688	A5SS	0.5	50	50	ENSMUST00000214747.2	ENSMUSG00000034007.11	Scaper	chr9	protein_coding	S phase cyclin A-associated protein in the ER
chr9	55771888	55781929	-	55669648	55781929	A3SS	0.5	50	50	ENSMUST00000216595.2	ENSMUSG00000034007.11	Scaper	chr9	protein_coding	S phase cyclin A-associated protein in the ER
chr9	55669648	55699452	-	55669648	55781929	A5SS	0.33	50	50	ENSMUST00000216595.2	ENSMUSG00000034007.11	Scaper	chr9	protein_coding	S phase cyclin A-associated protein in the ER
chr9	55669648	55714297	-	55669648	55781929	A5SS	0.33	50	50	ENSMUST00000216595.2	ENSMUSG00000034007.11	Scaper	chr9	protein_coding	S phase cyclin A-associated protein in the ER
chr9	55949964	55960191	+	55949964;55952612	55952416;55960191	ES	0.5	50	50	ENSMUST00000147842.2	ENSMUSG00000032320.8	Rcn2	chr9	protein_coding	reticulocalbin 2
chr9	55949488	55949859	+	55949488	55949863	A3SS	0.5	50	50	ENSMUST00000147842.2	ENSMUSG00000032320.8	Rcn2	chr9	protein_coding	reticulocalbin 2
chr9	56027937;56029306	56029219;56030043	+	56027937	56030043	cassetteExon	0.5	100	100	ENSMUST00000059206.8	ENSMUSG00000032322.15	Pstpip1	chr9	protein_coding	proline-serine-threonine phosphatase-interacting protein 1
chr9	56054862	56068084	-	56054862	56067972	5pMXE	0.25	50	50	ENSMUST00000214970.2	ENSMUSG00000032324.12	Tspan3	chr9	protein_coding	tetraspanin 3
chr9	56054862	56072550	-	56054862	56067972	5pMXE	0.25	50	50	ENSMUST00000214970.2	ENSMUSG00000032324.12	Tspan3	chr9	protein_coding	tetraspanin 3
chr9	56054862	56067735	-	56054862	56067972	A5SS	0.25	50	50	ENSMUST00000214970.2	ENSMUSG00000032324.12	Tspan3	chr9	protein_coding	tetraspanin 3
chr9	56054862	56072550	-	56054862	56068084	5pMXE	0.25	50	50	ENSMUST00000034876.10	ENSMUSG00000032324.12	Tspan3	chr9	protein_coding	tetraspanin 3
chr9	56054862	56067735	-	56054862	56068084	A5SS	0.25	50	50	ENSMUST00000034876.10	ENSMUSG00000032324.12	Tspan3	chr9	protein_coding	tetraspanin 3
chr9	56054862	56072550	-	56054862	56067735	5pMXE	0.25	50	50	ENSMUST00000215906.2	ENSMUSG00000032324.12	Tspan3	chr9	protein_coding	tetraspanin 3
chr9	56148628	56164811	-	56148628	56151240	5pMXE	0.5	50	50	ENSMUST00000188142.7	ENSMUSG00000074305.10	Peak1	chr9	protein_coding	pseudopodium-enriched atypical kinase 1
chr9	56168046	56281660	-	56168046;56226104	56225947;56281660	ES	0.5	50	50	ENSMUST00000061552.15	ENSMUSG00000074305.10	Peak1	chr9	protein_coding	pseudopodium-enriched atypical kinase 1
chr9	56326215;56361753	56361641;56374642	+	56326215	56374642	cassetteExon	0.5	100	100	ENSMUST00000034879.5	ENSMUSG00000032329.5	Hmg20a	chr9	protein_coding	high mobility group 20A
chr9	56561116	56592404	-	56561116;56581793	56581707;56592404	ES	0.5	50	50	ENSMUST00000053568.2	ENSMUSG00000049556.6	Lingo1	chr9	protein_coding	leucine rich repeat and Ig domain containing 1
chr9	56581793	56631585	-	56581793	56592404	5pMXE	0.5	50	50	ENSMUST00000053568.2	ENSMUSG00000049556.6	Lingo1	chr9	protein_coding	leucine rich repeat and Ig domain containing 1
chr9	56528599	56542359	-	56528599	56560884	A5SS	0.33	50	50	ENSMUST00000053568.2	ENSMUSG00000049556.6	Lingo1	chr9	protein_coding	leucine rich repeat and Ig domain containing 1
chr9	56528599	56554869	-	56528599	56560884	A5SS	0.33	50	50	ENSMUST00000053568.2	ENSMUSG00000049556.6	Lingo1	chr9	protein_coding	leucine rich repeat and Ig domain containing 1
chr9	56581793	56631585	-	56581793;56592565	56592404;56631585	ES	0.33	50	50	ENSMUST00000210032.2	ENSMUSG00000049556.6	Lingo1	chr9	protein_coding	leucine rich repeat and Ig domain containing 1
chr9	56631629	56676280	-	56631629	56682823	A5SS	0.5	50	50	ENSMUST00000210032.2	ENSMUSG00000049556.6	Lingo1	chr9	protein_coding	leucine rich repeat and Ig domain containing 1
chr9	56528599	56554869	-	56528599	56542359	5pMXE	0.33	50	50	ENSMUST00000114256.2	ENSMUSG00000049556.6	Lingo1	chr9	protein_coding	leucine rich repeat and Ig domain containing 1
chr9	56561116	56631585	-	56561116;56592565	56592404;56631585	ES	0.33	50	50	ENSMUST00000209596.2	ENSMUSG00000049556.6	Lingo1	chr9	protein_coding	leucine rich repeat and Ig domain containing 1
chr9	56561116;56581793	56581707;56631585	-	56561116;56592565	56592404;56631585	MXE	0.5	100	100	ENSMUST00000209596.2	ENSMUSG00000049556.6	Lingo1	chr9	protein_coding	leucine rich repeat and Ig domain containing 1
chr9	56561116;56581793	56581707;56631585	-	56561116	56631585	cassetteExon	0.5	100	100	ENSMUST00000210332.2	ENSMUSG00000049556.6	Lingo1	chr9	protein_coding	leucine rich repeat and Ig domain containing 1
chr9	56561116	56631585	-	56581793	56631585	3pMXE	0.33	50	50	ENSMUST00000209332.2	ENSMUSG00000049556.6	Lingo1	chr9	protein_coding	leucine rich repeat and Ig domain containing 1
chr9	56561116	56631585	-	56592565	56631585	3pMXE	0.33	50	50	ENSMUST00000210995.2	ENSMUSG00000049556.6	Lingo1	chr9	protein_coding	leucine rich repeat and Ig domain containing 1
chr9	56581793	56631585	-	56592565	56631585	3pMXE	0.33	50	50	ENSMUST00000210995.2	ENSMUSG00000049556.6	Lingo1	chr9	protein_coding	leucine rich repeat and Ig domain containing 1
chr9	56759068	56759784	-	56759068	56759155	5pMXE	0.5	50	50	ENSMUST00000055036.7	ENSMUSG00000045620.8	Odf3l1	chr9	protein_coding	outer dense fiber of sperm tails 3-like 1
chr9	56934765	56943767	+	56934765;56940500	56940390;56943767	ES	0.5	50	50	ENSMUST00000034832.8	ENSMUSG00000032290.8	Ptpn9	chr9	protein_coding	protein tyrosine phosphatase, non-receptor type 9
chr9	56902940	56903766	+	56902940	56927188	A3SS	0.5	50	50	ENSMUST00000034832.8	ENSMUSG00000032290.8	Ptpn9	chr9	protein_coding	protein tyrosine phosphatase, non-receptor type 9
chr9	56994085	57001721	+	56994085	56996662	3pMXE	0.5	50	50	ENSMUST00000169879.8	ENSMUSG00000042557.15	Sin3a	chr9	protein_coding	transcriptional regulator, SIN3A (yeast)
chr9	56983914	56993865	+	56979347	56993865	A5SS	0.33	50	50	ENSMUST00000169879.8	ENSMUSG00000042557.15	Sin3a	chr9	protein_coding	transcriptional regulator, SIN3A (yeast)
chr9	56988486	56993865	+	56979347	56993865	A5SS	0.33	50	50	ENSMUST00000169879.8	ENSMUSG00000042557.15	Sin3a	chr9	protein_coding	transcriptional regulator, SIN3A (yeast)
chr9	56994085	57001721	+	56994085;56996838	56996662;57001721	ES	0.5	50	50	ENSMUST00000167715.8	ENSMUSG00000042557.15	Sin3a	chr9	protein_coding	transcriptional regulator, SIN3A (yeast)
chr9	56983914	56988379	+	56982629	56988379	A5SS	0.5	50	50	ENSMUST00000167715.8	ENSMUSG00000042557.15	Sin3a	chr9	protein_coding	transcriptional regulator, SIN3A (yeast)
chr9	56983914	56993865	+	56988486	56993865	A5SS&ES	0.5	50	50	ENSMUST00000167715.8	ENSMUSG00000042557.15	Sin3a	chr9	protein_coding	transcriptional regulator, SIN3A (yeast)
chr9	57025455	57026377	+	57025446	57026377	A5SS	0.5	50	50	ENSMUST00000167715.8	ENSMUSG00000042557.15	Sin3a	chr9	protein_coding	transcriptional regulator, SIN3A (yeast)
chr9	56983914	56993865	+	56983914;56988486	56988379;56993865	ES	0.5	50	50	ENSMUST00000168678.8	ENSMUSG00000042557.15	Sin3a	chr9	protein_coding	transcriptional regulator, SIN3A (yeast)
chr9	57035491	57037833	-	57022983	57037833	A3SS	0.33	50	50	ENSMUST00000125333.3	ENSMUSG00000086728.3	Man2c1os	chr9	lncRNA	mannosidase, alpha, class 2C, member 1, opposite strand
chr9	57037411	57037833	-	57022983	57037833	A3SS	0.33	50	50	ENSMUST00000125333.3	ENSMUSG00000086728.3	Man2c1os	chr9	lncRNA	mannosidase, alpha, class 2C, member 1, opposite strand
chr9	57037411	57037833	-	57035491	57037833	A3SS	0.33	50	50	ENSMUST00000162738.2	ENSMUSG00000086728.3	Man2c1os	chr9	lncRNA	mannosidase, alpha, class 2C, member 1, opposite strand
chr9	57040876	57042374	+	57040876	57041417	3pMXE	0.5	50	50	ENSMUST00000161393.8	ENSMUSG00000032295.16	Man2c1	chr9	protein_coding	mannosidase, alpha, class 2C, member 1
chr9	57038307	57038443	+	57038173	57038443	A5SS	0.5	50	50	ENSMUST00000161393.8	ENSMUSG00000032295.16	Man2c1	chr9	protein_coding	mannosidase, alpha, class 2C, member 1
chr9	57038542	57038816	+	57038569	57038816	A5SS	0.33	50	50	ENSMUST00000161393.8	ENSMUSG00000032295.16	Man2c1	chr9	protein_coding	mannosidase, alpha, class 2C, member 1
chr9	57038565	57038816	+	57038569	57038816	A5SS	0.33	50	50	ENSMUST00000161393.8	ENSMUSG00000032295.16	Man2c1	chr9	protein_coding	mannosidase, alpha, class 2C, member 1
chr9	57042551	57043977	+	57042551;57042918	57042729;57043977	ES	0.33	50	50	ENSMUST00000160147.8	ENSMUSG00000032295.16	Man2c1	chr9	protein_coding	mannosidase, alpha, class 2C, member 1
chr9	57045804	57046353	+	57045804;57046253	57046132;57046353	ES	0.5	50	50	ENSMUST00000160147.8	ENSMUSG00000032295.16	Man2c1	chr9	protein_coding	mannosidase, alpha, class 2C, member 1
chr9	57046992	57047483	+	57046992;57047248	57047154;57047483	ES	0.5	50	50	ENSMUST00000160147.8	ENSMUSG00000032295.16	Man2c1	chr9	protein_coding	mannosidase, alpha, class 2C, member 1
chr9	57042918;57043609	57043487;57043977	+	57042918	57043977	cassetteExon	0.5	100	100	ENSMUST00000160147.8	ENSMUSG00000032295.16	Man2c1	chr9	protein_coding	mannosidase, alpha, class 2C, member 1
chr9	57042918;57043609	57043524;57043977	+	57042918	57043977	cassetteExon	0.5	100	100	ENSMUST00000160147.8	ENSMUSG00000032295.16	Man2c1	chr9	protein_coding	mannosidase, alpha, class 2C, member 1
chr9	57038565	57042783	+	57038565	57038816	A3SS&ES	0.5	50	50	ENSMUST00000160147.8	ENSMUSG00000032295.16	Man2c1	chr9	protein_coding	mannosidase, alpha, class 2C, member 1
chr9	57045804	57046138	+	57045804	57046132	A3SS	0.33	50	50	ENSMUST00000160147.8	ENSMUSG00000032295.16	Man2c1	chr9	protein_coding	mannosidase, alpha, class 2C, member 1
chr9	57046685	57046972	+	57046685	57046895	A3SS	0.5	50	50	ENSMUST00000160147.8	ENSMUSG00000032295.16	Man2c1	chr9	protein_coding	mannosidase, alpha, class 2C, member 1
chr9	57038542	57038816	+	57038565	57038816	A5SS	0.33	50	50	ENSMUST00000160147.8	ENSMUSG00000032295.16	Man2c1	chr9	protein_coding	mannosidase, alpha, class 2C, member 1
chr9	57042918	57043524	+	57042918	57043487	A3SS	0.33	50	50	ENSMUST00000161663.8	ENSMUSG00000032295.16	Man2c1	chr9	protein_coding	mannosidase, alpha, class 2C, member 1
chr9	57045804	57046353	+	57045804;57046253	57046138;57046353	ES	0.5	50	50	ENSMUST00000034836.16	ENSMUSG00000032295.16	Man2c1	chr9	protein_coding	mannosidase, alpha, class 2C, member 1
chr9	57042551	57044242	+	57042551;57044083	57043977;57044242	ES	0.5	50	50	ENSMUST00000160584.8	ENSMUSG00000032295.16	Man2c1	chr9	protein_coding	mannosidase, alpha, class 2C, member 1
chr9	57038565;57042918	57042783;57043977	+	57038565;57042551	57038816;57043977	MXE	0.5	100	100	ENSMUST00000160584.8	ENSMUSG00000032295.16	Man2c1	chr9	protein_coding	mannosidase, alpha, class 2C, member 1
chr9	57043609	57043977	+	57042551	57043977	A5SS	0.33	50	50	ENSMUST00000160584.8	ENSMUSG00000032295.16	Man2c1	chr9	protein_coding	mannosidase, alpha, class 2C, member 1
chr9	57042551	57043977	+	57042918	57043977	A5SS&ES	0.33	50	50	ENSMUST00000159130.8	ENSMUSG00000032295.16	Man2c1	chr9	protein_coding	mannosidase, alpha, class 2C, member 1
chr9	57042551	57044242	+	57044083	57044242	A5SS&ES	0.5	50	50	ENSMUST00000159130.8	ENSMUSG00000032295.16	Man2c1	chr9	protein_coding	mannosidase, alpha, class 2C, member 1
chr9	57042551	57042729	+	57042551	57044242	A3SS	0.33	50	50	ENSMUST00000161182.8	ENSMUSG00000032295.16	Man2c1	chr9	protein_coding	mannosidase, alpha, class 2C, member 1
chr9	57042918	57043977	+	57042918	57043524	A3SS	0.33	50	50	ENSMUST00000161338.2	ENSMUSG00000032295.16	Man2c1	chr9	protein_coding	mannosidase, alpha, class 2C, member 1
chr9	57045804	57046353	+	57046253	57046353	5pMXE	0.5	50	50	ENSMUST00000159402.2	ENSMUSG00000032295.16	Man2c1	chr9	protein_coding	mannosidase, alpha, class 2C, member 1
chr9	57046992	57047483	+	57046992	57047154	3pMXE	0.5	50	50	ENSMUST00000159402.2	ENSMUSG00000032295.16	Man2c1	chr9	protein_coding	mannosidase, alpha, class 2C, member 1
chr9	57046992	57047483	+	57047248	57047483	A5SS	0.5	50	50	ENSMUST00000159843.8	ENSMUSG00000032295.16	Man2c1	chr9	protein_coding	mannosidase, alpha, class 2C, member 1
chr9	57063266	57063800	-	57063266;57063575	57063456;57063800	ES	0.5	50	50	ENSMUST00000214072.2	ENSMUSG00000032299.11	Commd4	chr9	protein_coding	COMM domain containing 4
chr9	57063839	57064351	-	57063839;57064124	57064059;57064351	ES	0.33	50	50	ENSMUST00000214072.2	ENSMUSG00000032299.11	Commd4	chr9	protein_coding	COMM domain containing 4
chr9	57063839;57064042	57064034;57064351	-	57063839;57064124	57064059;57064351	MXE	0.5	100	100	ENSMUST00000214072.2	ENSMUSG00000032299.11	Commd4	chr9	protein_coding	COMM domain containing 4
chr9	57063295	57063456	-	57063266	57063456	A3SS	0.25	50	50	ENSMUST00000214072.2	ENSMUSG00000032299.11	Commd4	chr9	protein_coding	COMM domain containing 4
chr9	57063317	57063456	-	57063266	57063456	A3SS	0.25	50	50	ENSMUST00000214072.2	ENSMUSG00000032299.11	Commd4	chr9	protein_coding	COMM domain containing 4
chr9	57063348	57063456	-	57063266	57063456	A3SS	0.25	50	50	ENSMUST00000214072.2	ENSMUSG00000032299.11	Commd4	chr9	protein_coding	COMM domain containing 4
chr9	57063317	57063456	-	57063295	57063456	A3SS	0.25	50	50	ENSMUST00000214174.2	ENSMUSG00000032299.11	Commd4	chr9	protein_coding	COMM domain containing 4
chr9	57063348	57063456	-	57063295	57063456	A3SS	0.25	50	50	ENSMUST00000214174.2	ENSMUSG00000032299.11	Commd4	chr9	protein_coding	COMM domain containing 4
chr9	57063839	57064351	-	57063839;57064042	57064034;57064351	ES	0.33	50	50	ENSMUST00000214640.2	ENSMUSG00000032299.11	Commd4	chr9	protein_coding	COMM domain containing 4
chr9	57063266	57063800	-	57063575	57063800	A3SS&ES	0.5	50	50	ENSMUST00000215013.2	ENSMUSG00000032299.11	Commd4	chr9	protein_coding	COMM domain containing 4
chr9	57063348	57063456	-	57063317	57063456	A3SS	0.25	50	50	ENSMUST00000215013.2	ENSMUSG00000032299.11	Commd4	chr9	protein_coding	COMM domain containing 4
chr9	57063839	57064351	-	57063839	57064059	5pMXE	0.33	50	50	ENSMUST00000215500.2	ENSMUSG00000032299.11	Commd4	chr9	protein_coding	COMM domain containing 4
chr9	57063839	57064034	-	57063839	57064059	A5SS	0.33	50	50	ENSMUST00000215500.2	ENSMUSG00000032299.11	Commd4	chr9	protein_coding	COMM domain containing 4
chr9	57063266	57063800	-	57063266	57063456	A5SS	0.5	50	50	ENSMUST00000214325.2	ENSMUSG00000032299.11	Commd4	chr9	protein_coding	COMM domain containing 4
chr9	57063839;57064124	57064034;57064351	-	57063839	57064351	cassetteExon	0.5	100	100	ENSMUST00000214097.2	ENSMUSG00000032299.11	Commd4	chr9	protein_coding	COMM domain containing 4
chr9	57161612	57169712	-	57161612;57166423	57163669;57169712	ES	0.33	50	50	ENSMUST00000034846.7	ENSMUSG00000032300.8	1700017B05Rik	chr9	protein_coding	RIKEN cDNA 1700017B05 gene
chr9	57166215	57169712	-	57166423	57169712	A3SS	0.33	50	50	ENSMUST00000034846.7	ENSMUSG00000032300.8	1700017B05Rik	chr9	protein_coding	RIKEN cDNA 1700017B05 gene
chr9	57161612	57166240	-	57161612	57163669	A5SS	0.33	50	50	ENSMUST00000034846.7	ENSMUSG00000032300.8	1700017B05Rik	chr9	protein_coding	RIKEN cDNA 1700017B05 gene
chr9	57166423	57168504	-	57166423	57169712	A5SS	0.5	50	50	ENSMUST00000034846.7	ENSMUSG00000032300.8	1700017B05Rik	chr9	protein_coding	RIKEN cDNA 1700017B05 gene
chr9	57161612	57169712	-	57161612;57166423	57166240;57169712	ES	0.33	50	50	ENSMUST00000215298.2	ENSMUSG00000032300.8	1700017B05Rik	chr9	protein_coding	RIKEN cDNA 1700017B05 gene
chr9	57166215	57169712	-	57161612	57169712	A3SS	0.33	50	50	ENSMUST00000214583.2	ENSMUSG00000032300.8	1700017B05Rik	chr9	protein_coding	RIKEN cDNA 1700017B05 gene
chr9	57161612	57163669	-	57161612	57169712	A5SS	0.33	50	50	ENSMUST00000214583.2	ENSMUSG00000032300.8	1700017B05Rik	chr9	protein_coding	RIKEN cDNA 1700017B05 gene
chr9	57161612	57169712	-	57166423	57169712	3pMXE	0.33	50	50	ENSMUST00000213199.2	ENSMUSG00000032300.8	1700017B05Rik	chr9	protein_coding	RIKEN cDNA 1700017B05 gene
chr9	57327574	57342186	-	57327574;57328504	57328409;57342186	ES	0.16	50	50	ENSMUST00000215961.2	ENSMUSG00000063849.7	Ppcdc	chr9	protein_coding	phosphopantothenoylcysteine decarboxylase
chr9	57293381	57306044	-	57292650	57306044	A3SS	0.5	50	50	ENSMUST00000215961.2	ENSMUSG00000063849.7	Ppcdc	chr9	protein_coding	phosphopantothenoylcysteine decarboxylase
chr9	57316297	57342186	-	57328504	57342186	A3SS&ES	0.16	50	50	ENSMUST00000215961.2	ENSMUSG00000063849.7	Ppcdc	chr9	protein_coding	phosphopantothenoylcysteine decarboxylase
chr9	57322009	57342186	-	57328504	57342186	A3SS&ES	0.16	50	50	ENSMUST00000215961.2	ENSMUSG00000063849.7	Ppcdc	chr9	protein_coding	phosphopantothenoylcysteine decarboxylase
chr9	57322537	57327446	-	57306128	57327446	A3SS	0.33	50	50	ENSMUST00000215961.2	ENSMUSG00000063849.7	Ppcdc	chr9	protein_coding	phosphopantothenoylcysteine decarboxylase
chr9	57322537	57342186	-	57328504	57342186	A3SS&ES	0.16	50	50	ENSMUST00000215961.2	ENSMUSG00000063849.7	Ppcdc	chr9	protein_coding	phosphopantothenoylcysteine decarboxylase
chr9	57322755	57327446	-	57306128	57327446	A3SS	0.33	50	50	ENSMUST00000215961.2	ENSMUSG00000063849.7	Ppcdc	chr9	protein_coding	phosphopantothenoylcysteine decarboxylase
chr9	57327574	57328561	-	57327574	57328409	A5SS&ES	0.33	50	50	ENSMUST00000215961.2	ENSMUSG00000063849.7	Ppcdc	chr9	protein_coding	phosphopantothenoylcysteine decarboxylase
chr9	57328504	57332215	-	57328504	57342186	A5SS	0.5	50	50	ENSMUST00000215961.2	ENSMUSG00000063849.7	Ppcdc	chr9	protein_coding	phosphopantothenoylcysteine decarboxylase
chr9	57344765;57346645	57346397;57347353	-	57344765	57347353	cassetteExon	0.5	100	100	ENSMUST00000214144.2	ENSMUSG00000063849.7	Ppcdc	chr9	protein_coding	phosphopantothenoylcysteine decarboxylase
chr9	57306128;57327574	57327446;57342186	-	57306128	57342186	cassetteExon	0.5	100	100	ENSMUST00000214166.2	ENSMUSG00000063849.7	Ppcdc	chr9	protein_coding	phosphopantothenoylcysteine decarboxylase
chr9	57316297	57342186	-	57306128	57342186	A3SS	0.16	50	50	ENSMUST00000214166.2	ENSMUSG00000063849.7	Ppcdc	chr9	protein_coding	phosphopantothenoylcysteine decarboxylase
chr9	57322009	57342186	-	57306128	57342186	A3SS	0.16	50	50	ENSMUST00000214166.2	ENSMUSG00000063849.7	Ppcdc	chr9	protein_coding	phosphopantothenoylcysteine decarboxylase
chr9	57322537	57342186	-	57306128	57342186	A3SS	0.16	50	50	ENSMUST00000214166.2	ENSMUSG00000063849.7	Ppcdc	chr9	protein_coding	phosphopantothenoylcysteine decarboxylase
chr9	57328504	57342186	-	57306128	57342186	A3SS	0.16	50	50	ENSMUST00000214166.2	ENSMUSG00000063849.7	Ppcdc	chr9	protein_coding	phosphopantothenoylcysteine decarboxylase
chr9	57322009	57342186	-	57316297	57342186	A3SS	0.16	50	50	ENSMUST00000214624.2	ENSMUSG00000063849.7	Ppcdc	chr9	protein_coding	phosphopantothenoylcysteine decarboxylase
chr9	57322537	57342186	-	57316297	57342186	A3SS	0.16	50	50	ENSMUST00000214624.2	ENSMUSG00000063849.7	Ppcdc	chr9	protein_coding	phosphopantothenoylcysteine decarboxylase
chr9	57327574	57342186	-	57316297	57342186	A3SS	0.16	50	50	ENSMUST00000214624.2	ENSMUSG00000063849.7	Ppcdc	chr9	protein_coding	phosphopantothenoylcysteine decarboxylase
chr9	57322755	57327446	-	57322537	57327446	A3SS	0.5	50	50	ENSMUST00000085709.6	ENSMUSG00000063849.7	Ppcdc	chr9	protein_coding	phosphopantothenoylcysteine decarboxylase
chr9	57327574	57342186	-	57327574	57328409	5pMXE	0.33	50	50	ENSMUST00000213479.2	ENSMUSG00000063849.7	Ppcdc	chr9	protein_coding	phosphopantothenoylcysteine decarboxylase
chr9	57322009;57322537	57322369;57342186	-	57322009	57342186	cassetteExon	0.5	100	100	ENSMUST00000214339.2	ENSMUSG00000063849.7	Ppcdc	chr9	protein_coding	phosphopantothenoylcysteine decarboxylase
chr9	57327574	57342186	-	57322009	57342186	A3SS	0.16	50	50	ENSMUST00000214339.2	ENSMUSG00000063849.7	Ppcdc	chr9	protein_coding	phosphopantothenoylcysteine decarboxylase
chr9	57327574	57342186	-	57327574	57328561	5pMXE	0.33	50	50	ENSMUST00000217255.2	ENSMUSG00000063849.7	Ppcdc	chr9	protein_coding	phosphopantothenoylcysteine decarboxylase
chr9	57322009	57342186	-	57322537	57342186	3pMXE	0.16	50	50	ENSMUST00000215883.2	ENSMUSG00000063849.7	Ppcdc	chr9	protein_coding	phosphopantothenoylcysteine decarboxylase
chr9	57322537;57327574	57327446;57342186	-	57322537	57342186	cassetteExon	0.5	100	100	ENSMUST00000215883.2	ENSMUSG00000063849.7	Ppcdc	chr9	protein_coding	phosphopantothenoylcysteine decarboxylase
chr9	57306128	57342186	-	57327574	57342186	3pMXE	0.16	50	50	ENSMUST00000215299.2	ENSMUSG00000063849.7	Ppcdc	chr9	protein_coding	phosphopantothenoylcysteine decarboxylase
chr9	57322537	57342186	-	57327574	57342186	3pMXE	0.16	50	50	ENSMUST00000215299.2	ENSMUSG00000063849.7	Ppcdc	chr9	protein_coding	phosphopantothenoylcysteine decarboxylase
chr9	57353456	57358639	-	57353456;57354516	57354360;57358639	ES	0.33	50	50	ENSMUST00000046587.8	ENSMUSG00000040722.8	Scamp5	chr9	protein_coding	secretory carrier membrane protein 5
chr9	57354516;57355665	57355518;57358639	-	57354516	57358639	cassetteExon	0.5	100	100	ENSMUST00000046587.8	ENSMUSG00000040722.8	Scamp5	chr9	protein_coding	secretory carrier membrane protein 5
chr9	57358765	57359263	-	57358767	57359263	A3SS	0.5	50	50	ENSMUST00000046587.8	ENSMUSG00000040722.8	Scamp5	chr9	protein_coding	secretory carrier membrane protein 5
chr9	57359317	57375043	-	57359317	57375216	A5SS	0.33	50	50	ENSMUST00000046587.8	ENSMUSG00000040722.8	Scamp5	chr9	protein_coding	secretory carrier membrane protein 5
chr9	57359317	57375099	-	57359317	57375216	A5SS	0.33	50	50	ENSMUST00000046587.8	ENSMUSG00000040722.8	Scamp5	chr9	protein_coding	secretory carrier membrane protein 5
chr9	57353456	57358639	-	57353456	57354360	5pMXE	0.5	50	50	ENSMUST00000215208.2	ENSMUSG00000040722.8	Scamp5	chr9	protein_coding	secretory carrier membrane protein 5
chr9	57359317	57375043	-	57359317	57375099	A5SS	0.33	50	50	ENSMUST00000214256.2	ENSMUSG00000040722.8	Scamp5	chr9	protein_coding	secretory carrier membrane protein 5
chr9	57355665	57358639	-	57353456	57358639	A3SS	0.33	50	50	ENSMUST00000215734.2	ENSMUSG00000040722.8	Scamp5	chr9	protein_coding	secretory carrier membrane protein 5
chr9	57446171;57446577	57446529;57447938	+	57446171	57447938	cassetteExon	0.5	100	100	ENSMUST00000093833.6	ENSMUSG00000032305.16	Fam219b	chr9	protein_coding	family with sequence similarity 219, member B
chr9	57456461;57456704	57456578;57457856	-	57456461	57457856	cassetteExon	0.5	100	100	ENSMUST00000034856.15	ENSMUSG00000032306.15	Mpi	chr9	protein_coding	mannose phosphate isomerase
chr9	57485020;57485685	57485557;57486716	+	57485020	57486716	cassetteExon	0.5	100	100	ENSMUST00000045791.11	ENSMUSG00000040188.11	Scamp2	chr9	protein_coding	secretory carrier membrane protein 2
chr9	57470254	57484476	+	57468393	57484476	A5SS	0.5	50	50	ENSMUST00000045791.11	ENSMUSG00000040188.11	Scamp2	chr9	protein_coding	secretory carrier membrane protein 2
chr9	57489219	57490135	+	57488932	57490135	A5SS	0.5	50	50	ENSMUST00000045791.11	ENSMUSG00000040188.11	Scamp2	chr9	protein_coding	secretory carrier membrane protein 2
chr9	57497747	57498021	+	57497747	57497944	A3SS	0.5	50	50	ENSMUST00000053230.7	ENSMUSG00000032308.10	Ulk3	chr9	protein_coding	unc-51-like kinase 3
chr9	57509744	57513264	-	57509744;57512087	57512000;57513264	ES	0.5	50	50	ENSMUST00000045068.10	ENSMUSG00000039714.10	Cplx3	chr9	protein_coding	complexin 3
chr9	57512087	57512268	-	57512087	57513264	A5SS	0.5	50	50	ENSMUST00000045068.10	ENSMUSG00000039714.10	Cplx3	chr9	protein_coding	complexin 3
chr9	57514563	57516445	-	57514563;57515616	57515489;57516445	ES	0.5	50	50	ENSMUST00000093832.11	ENSMUSG00000056271.14	Lman1l	chr9	protein_coding	lectin, mannose-binding 1 like
chr9	57516568	57518323	-	57516568;57517317	57517250;57518323	ES	0.5	50	50	ENSMUST00000093832.11	ENSMUSG00000056271.14	Lman1l	chr9	protein_coding	lectin, mannose-binding 1 like
chr9	57538726;57541328	57541278;57552278	-	57538726	57552278	cassetteExon	0.5	100	100	ENSMUST00000034863.8	ENSMUSG00000032312.8	Csk	chr9	protein_coding	c-src tyrosine kinase
chr9	57538726	57552848	-	57538726	57552278	A5SS	0.33	50	50	ENSMUST00000034863.8	ENSMUSG00000032312.8	Csk	chr9	protein_coding	c-src tyrosine kinase
chr9	57538726	57552278	-	57538726	57541278	5pMXE	0.33	50	50	ENSMUST00000217314.2	ENSMUSG00000032312.8	Csk	chr9	protein_coding	c-src tyrosine kinase
chr9	57538726	57552848	-	57538726	57541278	5pMXE	0.33	50	50	ENSMUST00000217314.2	ENSMUSG00000032312.8	Csk	chr9	protein_coding	c-src tyrosine kinase
chr9	57559275;57559985	57559850;57560560	-	57559275	57560560	cassetteExon	0.5	100	100	ENSMUST00000215396.2	ENSMUSG00000032312.8	Csk	chr9	protein_coding	c-src tyrosine kinase
chr9	57541328	57552278	-	57541328	57559115	A5SS	0.5	50	50	ENSMUST00000215396.2	ENSMUSG00000032312.8	Csk	chr9	protein_coding	c-src tyrosine kinase
chr9	57604982	57607360	+	57595376	57607360	A5SS	0.5	50	50	ENSMUST00000216433.2	ENSMUSG00000032315.7	Cyp1a1	chr9	protein_coding	cytochrome P450, family 1, subfamily a, polypeptide 1
chr9	57620844	57634469	+	57620844;57623550	57623231;57634469	ES	0.5	50	50	ENSMUST00000043990.14	ENSMUSG00000038957.14	Edc3	chr9	protein_coding	enhancer of mRNA decapping 3
chr9	57615982;57619758	57619663;57620664	+	57615982	57620664	cassetteExon	0.5	100	100	ENSMUST00000043990.14	ENSMUSG00000038957.14	Edc3	chr9	protein_coding	enhancer of mRNA decapping 3
chr9	57620844	57634469	+	57620844	57623231	3pMXE	0.5	50	50	ENSMUST00000142807.2	ENSMUSG00000038957.14	Edc3	chr9	protein_coding	enhancer of mRNA decapping 3
chr9	57660713	57660784	-	57660683	57660784	A3SS	0.5	50	50	ENSMUST00000216095.2	ENSMUSG00000032316.9	Clk3	chr9	protein_coding	CDC-like kinase 3
chr9	57665633	57668107	-	57665633	57665910	A5SS	0.5	50	50	ENSMUST00000216095.2	ENSMUSG00000032316.9	Clk3	chr9	protein_coding	CDC-like kinase 3
chr9	57669150	57671761	-	57669150	57672357	A5SS	0.5	50	50	ENSMUST00000216095.2	ENSMUSG00000032316.9	Clk3	chr9	protein_coding	CDC-like kinase 3
chr9	57665633	57668107	-	57665633;57666006	57665910;57668107	ES	0.5	50	50	ENSMUST00000065330.8	ENSMUSG00000032316.9	Clk3	chr9	protein_coding	CDC-like kinase 3
chr9	57733256	57734856	+	57685484	57734856	A5SS	0.33	50	50	ENSMUST00000170133.8	ENSMUSG00000091908.8	Gm17231	chr9	lncRNA	predicted gene 17231
chr9	57734735	57734856	+	57685484	57734856	A5SS	0.33	50	50	ENSMUST00000170133.8	ENSMUSG00000091908.8	Gm17231	chr9	lncRNA	predicted gene 17231
chr9	57734735	57734856	+	57733256	57734856	A5SS	0.33	50	50	ENSMUST00000165858.8	ENSMUSG00000091908.8	Gm17231	chr9	lncRNA	predicted gene 17231
chr9	57717520	57717622	-	57717520	57717692	A5SS	0.5	50	50	ENSMUST00000164010.8	ENSMUSG00000004661.16	Arid3b	chr9	protein_coding	AT rich interactive domain 3B (BRIGHT-like)
chr9	57717763	57727835	-	57717763	57740899	A5SS	0.5	50	50	ENSMUST00000164010.8	ENSMUSG00000004661.16	Arid3b	chr9	protein_coding	AT rich interactive domain 3B (BRIGHT-like)
chr9	57741515	57743965	-	57741515	57743759	A5SS	0.5	50	50	ENSMUST00000164010.8	ENSMUSG00000004661.16	Arid3b	chr9	protein_coding	AT rich interactive domain 3B (BRIGHT-like)
chr9	57699968	57703390	-	57699968;57702317	57702219;57703390	ES	0.5	50	50	ENSMUST00000171444.8	ENSMUSG00000004661.16	Arid3b	chr9	protein_coding	AT rich interactive domain 3B (BRIGHT-like)
chr9	57705508;57712822	57712714;57717448	-	57705508	57717448	cassetteExon	0.5	100	100	ENSMUST00000171444.8	ENSMUSG00000004661.16	Arid3b	chr9	protein_coding	AT rich interactive domain 3B (BRIGHT-like)
chr9	57699968	57703390	-	57702317	57703390	3pMXE	0.5	50	50	ENSMUST00000098686.4	ENSMUSG00000004661.16	Arid3b	chr9	protein_coding	AT rich interactive domain 3B (BRIGHT-like)
chr9	57821956;57824926	57824841;57826592	+	57821956	57826592	cassetteExon	0.5	100	100	ENSMUST00000216925.2	ENSMUSG00000055720.11	Ubl7	chr9	protein_coding	ubiquitin-like 7 (bone marrow stromal cell-derived)
chr9	57827406	57827668	+	57827406	57827787	A3SS	0.5	50	50	ENSMUST00000216925.2	ENSMUSG00000055720.11	Ubl7	chr9	protein_coding	ubiquitin-like 7 (bone marrow stromal cell-derived)
chr9	57818342	57819921	+	57818290	57819921	A5SS	0.2	50	50	ENSMUST00000216925.2	ENSMUSG00000055720.11	Ubl7	chr9	protein_coding	ubiquitin-like 7 (bone marrow stromal cell-derived)
chr9	57818454	57819921	+	57818290	57819921	A5SS	0.2	50	50	ENSMUST00000216925.2	ENSMUSG00000055720.11	Ubl7	chr9	protein_coding	ubiquitin-like 7 (bone marrow stromal cell-derived)
chr9	57818565	57819921	+	57818290	57819921	A5SS	0.2	50	50	ENSMUST00000216925.2	ENSMUSG00000055720.11	Ubl7	chr9	protein_coding	ubiquitin-like 7 (bone marrow stromal cell-derived)
chr9	57819108	57819921	+	57818290	57819921	A5SS	0.2	50	50	ENSMUST00000216925.2	ENSMUSG00000055720.11	Ubl7	chr9	protein_coding	ubiquitin-like 7 (bone marrow stromal cell-derived)
chr9	57820214	57821837	+	57820133	57821837	A5SS	0.5	50	50	ENSMUST00000216925.2	ENSMUSG00000055720.11	Ubl7	chr9	protein_coding	ubiquitin-like 7 (bone marrow stromal cell-derived)
chr9	57818342;57819108	57819000;57819921	+	57818342	57819921	cassetteExon	0.5	100	100	ENSMUST00000163329.2	ENSMUSG00000055720.11	Ubl7	chr9	protein_coding	ubiquitin-like 7 (bone marrow stromal cell-derived)
chr9	57818454	57819921	+	57818342	57819921	A5SS	0.2	50	50	ENSMUST00000163329.2	ENSMUSG00000055720.11	Ubl7	chr9	protein_coding	ubiquitin-like 7 (bone marrow stromal cell-derived)
chr9	57818565	57819921	+	57818342	57819921	A5SS	0.2	50	50	ENSMUST00000163329.2	ENSMUSG00000055720.11	Ubl7	chr9	protein_coding	ubiquitin-like 7 (bone marrow stromal cell-derived)
chr9	57818454	57819000	+	57818342	57819000	A5SS	0.5	50	50	ENSMUST00000217132.2	ENSMUSG00000055720.11	Ubl7	chr9	protein_coding	ubiquitin-like 7 (bone marrow stromal cell-derived)
chr9	57818454	57819921	+	57819108	57819921	A5SS&ES	0.25	50	50	ENSMUST00000217132.2	ENSMUSG00000055720.11	Ubl7	chr9	protein_coding	ubiquitin-like 7 (bone marrow stromal cell-derived)
chr9	57818565	57819921	+	57819108	57819921	A5SS&ES	0.25	50	50	ENSMUST00000217132.2	ENSMUSG00000055720.11	Ubl7	chr9	protein_coding	ubiquitin-like 7 (bone marrow stromal cell-derived)
chr9	57818454;57819108	57819000;57819921	+	57818454	57819921	cassetteExon	0.5	100	100	ENSMUST00000216841.2	ENSMUSG00000055720.11	Ubl7	chr9	protein_coding	ubiquitin-like 7 (bone marrow stromal cell-derived)
chr9	57818565	57819921	+	57818454	57819921	A5SS	0.2	50	50	ENSMUST00000216841.2	ENSMUSG00000055720.11	Ubl7	chr9	protein_coding	ubiquitin-like 7 (bone marrow stromal cell-derived)
chr9	57818342	57819921	+	57819108	57819921	A5SS&ES	0.25	50	50	ENSMUST00000214086.2	ENSMUSG00000055720.11	Ubl7	chr9	protein_coding	ubiquitin-like 7 (bone marrow stromal cell-derived)
chr9	57847611;57860961	57860819;57861453	+	57847611	57861453	cassetteExon	0.5	100	100	ENSMUST00000214314.2	ENSMUSG00000038264.9	Sema7a	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A
chr9	57923712;57925676	57925477;57926576	+	57923712	57926576	cassetteExon	0.5	100	100	ENSMUST00000188116.7	ENSMUSG00000032323.14	Cyp11a1	chr9	protein_coding	cytochrome P450, family 11, subfamily a, polypeptide 1
chr9	57922581	57923557	+	57913838	57923557	A5SS	0.5	50	50	ENSMUST00000188116.7	ENSMUSG00000032323.14	Cyp11a1	chr9	protein_coding	cytochrome P450, family 11, subfamily a, polypeptide 1
chr9	57924798	57925477	+	57923712	57925477	A5SS	0.5	50	50	ENSMUST00000034874.14	ENSMUSG00000032323.14	Cyp11a1	chr9	protein_coding	cytochrome P450, family 11, subfamily a, polypeptide 1
chr9	57923712	57926576	+	57923712	57925477	A3SS	0.5	50	50	ENSMUST00000188944.2	ENSMUSG00000032323.14	Cyp11a1	chr9	protein_coding	cytochrome P450, family 11, subfamily a, polypeptide 1
chr9	57965679	57976372	-	57965679;57974857	57974786;57976372	ES	0.5	50	50	ENSMUST00000042205.13	ENSMUSG00000037716.16	Ccdc33	chr9	protein_coding	coiled-coil domain containing 33
chr9	57984912	57989243	-	57984912;57988167	57988060;57989243	ES	0.5	50	50	ENSMUST00000042205.13	ENSMUSG00000037716.16	Ccdc33	chr9	protein_coding	coiled-coil domain containing 33
chr9	58005961	58024370	-	58005961	58009205	5pMXE	0.5	50	50	ENSMUST00000042205.13	ENSMUSG00000037716.16	Ccdc33	chr9	protein_coding	coiled-coil domain containing 33
chr9	57937703;57938545	57938339;57938898	-	57937703	57938898	cassetteExon	0.5	100	100	ENSMUST00000042205.13	ENSMUSG00000037716.16	Ccdc33	chr9	protein_coding	coiled-coil domain containing 33
chr9	57937703;57938545	57938444;57938898	-	57937703	57938898	cassetteExon	0.5	100	100	ENSMUST00000042205.13	ENSMUSG00000037716.16	Ccdc33	chr9	protein_coding	coiled-coil domain containing 33
chr9	57940591	57940839	-	57940594	57940839	A3SS	0.5	50	50	ENSMUST00000042205.13	ENSMUSG00000037716.16	Ccdc33	chr9	protein_coding	coiled-coil domain containing 33
chr9	57940998	57949247	-	57940998	57965524	A5SS	0.5	50	50	ENSMUST00000042205.13	ENSMUSG00000037716.16	Ccdc33	chr9	protein_coding	coiled-coil domain containing 33
chr9	57984912	57993826	-	57984912;57989352	57989243;57993826	ES	0.5	50	50	ENSMUST00000098682.10	ENSMUSG00000037716.16	Ccdc33	chr9	protein_coding	coiled-coil domain containing 33
chr9	57993959;58021622	58021580;58024370	-	57993959;58005961	58005798;58024370	MXE	0.5	100	100	ENSMUST00000098682.10	ENSMUSG00000037716.16	Ccdc33	chr9	protein_coding	coiled-coil domain containing 33
chr9	57937703	57938444	-	57937703	57938339	A5SS	0.33	50	50	ENSMUST00000098682.10	ENSMUSG00000037716.16	Ccdc33	chr9	protein_coding	coiled-coil domain containing 33
chr9	57965679	57976372	-	57974857	57976372	3pMXE	0.5	50	50	ENSMUST00000146741.2	ENSMUSG00000037716.16	Ccdc33	chr9	protein_coding	coiled-coil domain containing 33
chr9	58019302	58021580	-	57993959	58021580	A3SS	0.5	50	50	ENSMUST00000146741.2	ENSMUSG00000037716.16	Ccdc33	chr9	protein_coding	coiled-coil domain containing 33
chr9	57984912	57988060	-	57984912	57993826	A5SS	0.33	50	50	ENSMUST00000146741.2	ENSMUSG00000037716.16	Ccdc33	chr9	protein_coding	coiled-coil domain containing 33
chr9	57993959	58005798	-	57993959	58021580	A5SS	0.5	50	50	ENSMUST00000146741.2	ENSMUSG00000037716.16	Ccdc33	chr9	protein_coding	coiled-coil domain containing 33
chr9	58036433	58042357	+	57971171	58042357	A5SS	0.11	50	50	ENSMUST00000145886.2	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58036931	58042357	+	57971171	58042357	A5SS	0.11	50	50	ENSMUST00000145886.2	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58036964	58042357	+	57971171	58042357	A5SS	0.11	50	50	ENSMUST00000145886.2	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58039375	58042357	+	57971171	58042357	A5SS	0.11	50	50	ENSMUST00000145886.2	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58041429	58042357	+	57971171	58042357	A5SS	0.11	50	50	ENSMUST00000145886.2	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58041731	58042357	+	57971171	58042357	A5SS	0.11	50	50	ENSMUST00000145886.2	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58041938	58042357	+	57971171	58042357	A5SS	0.11	50	50	ENSMUST00000145886.2	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58042115	58042357	+	57971171	58042357	A5SS	0.11	50	50	ENSMUST00000145886.2	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58036931	58042357	+	58036433	58042357	A5SS	0.11	50	50	ENSMUST00000085677.9	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58036964	58042357	+	58036433	58042357	A5SS	0.11	50	50	ENSMUST00000085677.9	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58039375	58042357	+	58036433	58042357	A5SS	0.11	50	50	ENSMUST00000085677.9	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58041429	58042357	+	58036433	58042357	A5SS	0.11	50	50	ENSMUST00000085677.9	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58041731	58042357	+	58036433	58042357	A5SS	0.11	50	50	ENSMUST00000085677.9	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58041938	58042357	+	58036433	58042357	A5SS	0.11	50	50	ENSMUST00000085677.9	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58042115	58042357	+	58036433	58042357	A5SS	0.11	50	50	ENSMUST00000085677.9	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58036931	58042357	+	58036964	58042357	A5SS	0.11	50	50	ENSMUST00000034880.10	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58039375	58042357	+	58036964	58042357	A5SS	0.11	50	50	ENSMUST00000034880.10	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58041429	58042357	+	58036964	58042357	A5SS	0.11	50	50	ENSMUST00000034880.10	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58041731	58042357	+	58036964	58042357	A5SS	0.11	50	50	ENSMUST00000034880.10	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58041938	58042357	+	58036964	58042357	A5SS	0.11	50	50	ENSMUST00000034880.10	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58042115	58042357	+	58036964	58042357	A5SS	0.11	50	50	ENSMUST00000034880.10	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58039375	58042357	+	58036931	58042357	A5SS	0.11	50	50	ENSMUST00000133287.8	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58041429	58042357	+	58036931	58042357	A5SS	0.11	50	50	ENSMUST00000133287.8	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58041731	58042357	+	58036931	58042357	A5SS	0.11	50	50	ENSMUST00000133287.8	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58041938	58042357	+	58036931	58042357	A5SS	0.11	50	50	ENSMUST00000133287.8	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58042115	58042357	+	58036931	58042357	A5SS	0.11	50	50	ENSMUST00000133287.8	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58041429	58042357	+	58039375	58042357	A5SS	0.11	50	50	ENSMUST00000136338.8	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58041731	58042357	+	58039375	58042357	A5SS	0.11	50	50	ENSMUST00000136338.8	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58041938	58042357	+	58039375	58042357	A5SS	0.11	50	50	ENSMUST00000136338.8	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58042115	58042357	+	58039375	58042357	A5SS	0.11	50	50	ENSMUST00000136338.8	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58041731	58042357	+	58041429	58042357	A5SS	0.11	50	50	ENSMUST00000134955.8	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58041938	58042357	+	58041429	58042357	A5SS	0.11	50	50	ENSMUST00000134955.8	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58042115	58042357	+	58041429	58042357	A5SS	0.11	50	50	ENSMUST00000134955.8	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58041938	58042357	+	58041731	58042357	A5SS	0.11	50	50	ENSMUST00000147134.8	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58042115	58042357	+	58041731	58042357	A5SS	0.11	50	50	ENSMUST00000147134.8	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58042115	58042357	+	58041938	58042357	A5SS	0.11	50	50	ENSMUST00000128378.8	ENSMUSG00000032327.15	Stra6	chr9	protein_coding	stimulated by retinoic acid gene 6
chr9	58065513	58097177	-	58065513	58066245	5pMXE	0.33	50	50	ENSMUST00000041477.15	ENSMUSG00000037206.16	Islr	chr9	protein_coding	immunoglobulin superfamily containing leucine-rich repeat
chr9	58065513	58065710	-	58065513	58066245	A5SS	0.33	50	50	ENSMUST00000041477.15	ENSMUSG00000037206.16	Islr	chr9	protein_coding	immunoglobulin superfamily containing leucine-rich repeat
chr9	58065513	58097177	-	58065513	58065710	5pMXE	0.33	50	50	ENSMUST00000168864.4	ENSMUSG00000037206.16	Islr	chr9	protein_coding	immunoglobulin superfamily containing leucine-rich repeat
chr9	58107266	58108563	-	58097339	58108563	A3SS	0.25	50	50	ENSMUST00000217578.2	ENSMUSG00000037206.16	Islr	chr9	protein_coding	immunoglobulin superfamily containing leucine-rich repeat
chr9	58107726	58108563	-	58097339	58108563	A3SS	0.25	50	50	ENSMUST00000217578.2	ENSMUSG00000037206.16	Islr	chr9	protein_coding	immunoglobulin superfamily containing leucine-rich repeat
chr9	58107744	58108563	-	58097339	58108563	A3SS	0.25	50	50	ENSMUST00000217578.2	ENSMUSG00000037206.16	Islr	chr9	protein_coding	immunoglobulin superfamily containing leucine-rich repeat
chr9	58108655	58108873	-	58108655	58111502	A5SS	0.16	50	50	ENSMUST00000217578.2	ENSMUSG00000037206.16	Islr	chr9	protein_coding	immunoglobulin superfamily containing leucine-rich repeat
chr9	58108655	58109235	-	58108655	58111502	A5SS	0.16	50	50	ENSMUST00000217578.2	ENSMUSG00000037206.16	Islr	chr9	protein_coding	immunoglobulin superfamily containing leucine-rich repeat
chr9	58108655	58109564	-	58108655	58111502	A5SS	0.16	50	50	ENSMUST00000217578.2	ENSMUSG00000037206.16	Islr	chr9	protein_coding	immunoglobulin superfamily containing leucine-rich repeat
chr9	58108655	58109716	-	58108655	58111502	A5SS	0.16	50	50	ENSMUST00000217578.2	ENSMUSG00000037206.16	Islr	chr9	protein_coding	immunoglobulin superfamily containing leucine-rich repeat
chr9	58108655	58109859	-	58108655	58111502	A5SS	0.16	50	50	ENSMUST00000217578.2	ENSMUSG00000037206.16	Islr	chr9	protein_coding	immunoglobulin superfamily containing leucine-rich repeat
chr9	58107266;58107726	58107555;58108563	-	58107266	58108563	cassetteExon	0.5	100	100	ENSMUST00000163200.3	ENSMUSG00000051243.15	Islr2	chr9	protein_coding	immunoglobulin superfamily containing leucine-rich repeat 2
chr9	58107266;58107744	58107555;58108563	-	58107266	58108563	cassetteExon	0.5	100	100	ENSMUST00000163200.3	ENSMUSG00000051243.15	Islr2	chr9	protein_coding	immunoglobulin superfamily containing leucine-rich repeat 2
chr9	58108655	58109235	-	58108655	58108873	5pMXE	0.16	50	50	ENSMUST00000165276.2	ENSMUSG00000051243.15	Islr2	chr9	protein_coding	immunoglobulin superfamily containing leucine-rich repeat 2
chr9	58108655	58109564	-	58108655	58108873	5pMXE	0.16	50	50	ENSMUST00000165276.2	ENSMUSG00000051243.15	Islr2	chr9	protein_coding	immunoglobulin superfamily containing leucine-rich repeat 2
chr9	58108655	58109716	-	58108655	58108873	5pMXE	0.16	50	50	ENSMUST00000165276.2	ENSMUSG00000051243.15	Islr2	chr9	protein_coding	immunoglobulin superfamily containing leucine-rich repeat 2
chr9	58108655	58109859	-	58108655	58108873	5pMXE	0.16	50	50	ENSMUST00000165276.2	ENSMUSG00000051243.15	Islr2	chr9	protein_coding	immunoglobulin superfamily containing leucine-rich repeat 2
chr9	58108655	58109716	-	58108655	58109235	5pMXE	0.16	50	50	ENSMUST00000163897.8	ENSMUSG00000051243.15	Islr2	chr9	protein_coding	immunoglobulin superfamily containing leucine-rich repeat 2
chr9	58108655	58109859	-	58108655	58109235	5pMXE	0.16	50	50	ENSMUST00000163897.8	ENSMUSG00000051243.15	Islr2	chr9	protein_coding	immunoglobulin superfamily containing leucine-rich repeat 2
chr9	58107726	58108563	-	58107744	58108563	A3SS	0.33	50	50	ENSMUST00000163897.8	ENSMUSG00000051243.15	Islr2	chr9	protein_coding	immunoglobulin superfamily containing leucine-rich repeat 2
chr9	58108655	58109564	-	58108655	58109235	A5SS	0.16	50	50	ENSMUST00000163897.8	ENSMUSG00000051243.15	Islr2	chr9	protein_coding	immunoglobulin superfamily containing leucine-rich repeat 2
chr9	58108655	58109859	-	58108655	58109716	5pMXE	0.16	50	50	ENSMUST00000170421.8	ENSMUSG00000051243.15	Islr2	chr9	protein_coding	immunoglobulin superfamily containing leucine-rich repeat 2
chr9	58108655	58109564	-	58108655	58109716	A5SS	0.16	50	50	ENSMUST00000170421.8	ENSMUSG00000051243.15	Islr2	chr9	protein_coding	immunoglobulin superfamily containing leucine-rich repeat 2
chr9	58107266	58108563	-	58107266	58107555	5pMXE	0.5	50	50	ENSMUST00000217050.2	ENSMUSG00000051243.15	Islr2	chr9	protein_coding	immunoglobulin superfamily containing leucine-rich repeat 2
chr9	58108655	58109859	-	58108655	58109564	5pMXE	0.16	50	50	ENSMUST00000216231.2	ENSMUSG00000051243.15	Islr2	chr9	protein_coding	immunoglobulin superfamily containing leucine-rich repeat 2
chr9	58107266	58108563	-	58107726	58108563	3pMXE	0.25	50	50	ENSMUST00000213349.2	ENSMUSG00000051243.15	Islr2	chr9	protein_coding	immunoglobulin superfamily containing leucine-rich repeat 2
chr9	58127852	58136638	-	58127852;58129148	58128998;58136638	ES	0.33	50	50	ENSMUST00000085673.11	ENSMUSG00000036986.17	Pml	chr9	protein_coding	promyelocytic leukemia
chr9	58137369	58140436	-	58137369;58137911	58137774;58140436	ES	0.5	50	50	ENSMUST00000085673.11	ENSMUSG00000036986.17	Pml	chr9	protein_coding	promyelocytic leukemia
chr9	58154721;58154964	58154829;58156824	-	58154721	58156824	cassetteExon	0.5	100	100	ENSMUST00000085673.11	ENSMUSG00000036986.17	Pml	chr9	protein_coding	promyelocytic leukemia
chr9	58127340	58156824	-	58154721	58156824	A3SS&ES	0.25	50	50	ENSMUST00000085673.11	ENSMUSG00000036986.17	Pml	chr9	protein_coding	promyelocytic leukemia
chr9	58127847	58128998	-	58127852	58128998	A3SS	0.5	50	50	ENSMUST00000085673.11	ENSMUSG00000036986.17	Pml	chr9	protein_coding	promyelocytic leukemia
chr9	58127847	58136638	-	58129148	58136638	A3SS&ES	0.33	50	50	ENSMUST00000085673.11	ENSMUSG00000036986.17	Pml	chr9	protein_coding	promyelocytic leukemia
chr9	58154721	58156944	-	58154721	58156824	A5SS	0.33	50	50	ENSMUST00000085673.11	ENSMUSG00000036986.17	Pml	chr9	protein_coding	promyelocytic leukemia
chr9	58127847	58136638	-	58127847;58129148	58128998;58136638	ES	0.33	50	50	ENSMUST00000135310.8	ENSMUSG00000036986.17	Pml	chr9	protein_coding	promyelocytic leukemia
chr9	58127852	58136638	-	58129148	58136638	A3SS&ES	0.33	50	50	ENSMUST00000135310.8	ENSMUSG00000036986.17	Pml	chr9	protein_coding	promyelocytic leukemia
chr9	58127847	58136638	-	58127852	58136638	A3SS	0.33	50	50	ENSMUST00000148628.8	ENSMUSG00000036986.17	Pml	chr9	protein_coding	promyelocytic leukemia
chr9	58140530	58156824	-	58127340	58156824	A3SS	0.25	50	50	ENSMUST00000124063.2	ENSMUSG00000036986.17	Pml	chr9	protein_coding	promyelocytic leukemia
chr9	58154964	58156824	-	58127340	58156824	A3SS	0.25	50	50	ENSMUST00000124063.2	ENSMUSG00000036986.17	Pml	chr9	protein_coding	promyelocytic leukemia
chr9	58154721	58156824	-	58140530	58156824	A3SS	0.33	50	50	ENSMUST00000148301.2	ENSMUSG00000036986.17	Pml	chr9	protein_coding	promyelocytic leukemia
chr9	58154964	58156824	-	58140530	58156824	A3SS	0.33	50	50	ENSMUST00000148301.2	ENSMUSG00000036986.17	Pml	chr9	protein_coding	promyelocytic leukemia
chr9	58140530	58141636	-	58140530	58156824	A5SS	0.5	50	50	ENSMUST00000148301.2	ENSMUSG00000036986.17	Pml	chr9	protein_coding	promyelocytic leukemia
chr9	58137369	58140436	-	58137911	58140436	3pMXE	0.5	50	50	ENSMUST00000138775.2	ENSMUSG00000036986.17	Pml	chr9	protein_coding	promyelocytic leukemia
chr9	58154721	58154829	-	58154721	58156944	A5SS	0.33	50	50	ENSMUST00000124982.2	ENSMUSG00000036986.17	Pml	chr9	protein_coding	promyelocytic leukemia
chr9	58162323;58163096	58162817;58163923	+	58162323	58163923	cassetteExon	0.5	100	100	ENSMUST00000034883.7	ENSMUSG00000032333.7	Stoml1	chr9	protein_coding	stomatin-like 1
chr9	58167705	58168092	+	58167705	58168081	A3SS	0.5	50	50	ENSMUST00000034883.7	ENSMUSG00000032333.7	Stoml1	chr9	protein_coding	stomatin-like 1
chr9	58160560	58162217	+	58160682	58162217	A5SS	0.5	50	50	ENSMUST00000034883.7	ENSMUSG00000032333.7	Stoml1	chr9	protein_coding	stomatin-like 1
chr9	58162323	58163923	+	58162323	58162817	3pMXE	0.5	50	50	ENSMUST00000215488.2	ENSMUSG00000032333.7	Stoml1	chr9	protein_coding	stomatin-like 1
chr9	58268629	58269308	-	58268580	58269308	A3SS	0.5	50	50	ENSMUST00000040217.6	ENSMUSG00000036244.6	Tbc1d21	chr9	protein_coding	TBC1 domain family, member 21
chr9	58443035;58443895	58443842;58444552	-	58443035	58444552	cassetteExon	0.5	100	100	ENSMUST00000165365.3	ENSMUSG00000035914.12	Cd276	chr9	protein_coding	CD276 antigen
chr9	58444890	58447950	-	58438013	58447950	A3SS	0.5	50	50	ENSMUST00000216629.2	ENSMUSG00000035914.12	Cd276	chr9	protein_coding	CD276 antigen
chr9	58438013	58442739	-	58438013	58447950	A5SS	0.5	50	50	ENSMUST00000216629.2	ENSMUSG00000035914.12	Cd276	chr9	protein_coding	CD276 antigen
chr9	58489809	58530970	+	58489809;58526293	58525946;58530970	ES	0.5	50	50	ENSMUST00000177292.8	ENSMUSG00000032336.18	Nptn	chr9	protein_coding	neuroplastin
chr9	58535211	58550812	+	58535211;58548085	58547952;58550812	ES	0.5	50	50	ENSMUST00000177292.8	ENSMUSG00000032336.18	Nptn	chr9	protein_coding	neuroplastin
chr9	58551085	58557792	+	58551085	58557780	A3SS	0.33	50	50	ENSMUST00000177292.8	ENSMUSG00000032336.18	Nptn	chr9	protein_coding	neuroplastin
chr9	58551085	58558342	+	58551085	58557780	A3SS&ES	0.33	50	50	ENSMUST00000177292.8	ENSMUSG00000032336.18	Nptn	chr9	protein_coding	neuroplastin
chr9	58536538	58547952	+	58535211	58547952	A5SS	0.33	50	50	ENSMUST00000177292.8	ENSMUSG00000032336.18	Nptn	chr9	protein_coding	neuroplastin
chr9	58550967	58557780	+	58551085	58557780	A5SS	0.5	50	50	ENSMUST00000177292.8	ENSMUSG00000032336.18	Nptn	chr9	protein_coding	neuroplastin
chr9	58489809	58535117	+	58489809;58531138	58530970;58535117	ES	0.5	50	50	ENSMUST00000085651.12	ENSMUSG00000032336.18	Nptn	chr9	protein_coding	neuroplastin
chr9	58535211	58550812	+	58535211	58547952	3pMXE	0.5	50	50	ENSMUST00000177380.8	ENSMUSG00000032336.18	Nptn	chr9	protein_coding	neuroplastin
chr9	58551085	58558342	+	58551085	58557792	A3SS&ES	0.33	50	50	ENSMUST00000176557.8	ENSMUSG00000032336.18	Nptn	chr9	protein_coding	neuroplastin
chr9	58489809	58547952	+	58489809;58535211	58535117;58547952	ES	0.33	50	50	ENSMUST00000175945.7	ENSMUSG00000032336.18	Nptn	chr9	protein_coding	neuroplastin
chr9	58489809	58525946	+	58489809	58535117	A3SS	0.25	50	50	ENSMUST00000175945.7	ENSMUSG00000032336.18	Nptn	chr9	protein_coding	neuroplastin
chr9	58489809;58535211	58535117;58550812	+	58489809;58548085	58547952;58550812	MXE	0.5	100	100	ENSMUST00000177064.8	ENSMUSG00000032336.18	Nptn	chr9	protein_coding	neuroplastin
chr9	58489809	58525946	+	58489809	58547952	A3SS	0.25	50	50	ENSMUST00000177064.8	ENSMUSG00000032336.18	Nptn	chr9	protein_coding	neuroplastin
chr9	58489809	58530970	+	58489809	58547952	A3SS	0.25	50	50	ENSMUST00000177064.8	ENSMUSG00000032336.18	Nptn	chr9	protein_coding	neuroplastin
chr9	58536538	58547952	+	58489809	58547952	A5SS	0.33	50	50	ENSMUST00000177064.8	ENSMUSG00000032336.18	Nptn	chr9	protein_coding	neuroplastin
chr9	58489809;58548085	58547952;58550812	+	58489809;58535211	58530970;58550812	MXE	0.5	100	100	ENSMUST00000176126.2	ENSMUSG00000032336.18	Nptn	chr9	protein_coding	neuroplastin
chr9	58559292	58559650	+	58559292	58561312	A3SS	0.5	50	50	ENSMUST00000176916.8	ENSMUSG00000032336.18	Nptn	chr9	protein_coding	neuroplastin
chr9	58565126	58567457	-	58565126	58566404	5pMXE	0.5	50	50	ENSMUST00000175792.8	ENSMUSG00000074269.11	Rec114	chr9	protein_coding	REC114 meiotic recombination protein
chr9	58560389	58567457	-	58560389;58565126	58565040;58567457	ES	0.5	50	50	ENSMUST00000098674.6	ENSMUSG00000074269.11	Rec114	chr9	protein_coding	REC114 meiotic recombination protein
chr9	58619388	58651115	-	58619388	58648670	5pMXE	0.5	50	50	ENSMUST00000098674.6	ENSMUSG00000074269.11	Rec114	chr9	protein_coding	REC114 meiotic recombination protein
chr9	58567654	58571470	-	58567654	58573116	A5SS	0.5	50	50	ENSMUST00000098674.6	ENSMUSG00000074269.11	Rec114	chr9	protein_coding	REC114 meiotic recombination protein
chr9	58806516	58810197	-	58806516;58809398	58809366;58810197	ES	0.5	50	50	ENSMUST00000068664.7	ENSMUSG00000032340.9	Neo1	chr9	protein_coding	neogenin
chr9	58814329	58815687	-	58814377	58815687	A3SS	0.5	50	50	ENSMUST00000068664.7	ENSMUSG00000032340.9	Neo1	chr9	protein_coding	neogenin
chr9	58838398	58863242	-	58838458	58863242	A3SS	0.5	50	50	ENSMUST00000068664.7	ENSMUSG00000032340.9	Neo1	chr9	protein_coding	neogenin
chr9	59221134	59225217	+	59221134	59222014	3pMXE	0.33	50	50	ENSMUST00000217570.2	ENSMUSG00000025236.12	Adpgk	chr9	protein_coding	ADP-dependent glucokinase
chr9	59221134	59222017	+	59221134	59222014	A3SS	0.33	50	50	ENSMUST00000217570.2	ENSMUSG00000025236.12	Adpgk	chr9	protein_coding	ADP-dependent glucokinase
chr9	59221134	59225217	+	59221134	59222017	3pMXE	0.33	50	50	ENSMUST00000026266.9	ENSMUSG00000025236.12	Adpgk	chr9	protein_coding	ADP-dependent glucokinase
chr9	59230265	59231320	-	59230265;59230872	59230671;59231320	ES	0.5	50	50	ENSMUST00000026265.8	ENSMUSG00000025235.9	Bbs4	chr9	protein_coding	Bardet-Biedl syndrome 4 (human)
chr9	59251422	59260693	-	59251422;59253134	59253083;59260693	ES	0.5	50	50	ENSMUST00000026265.8	ENSMUSG00000025235.9	Bbs4	chr9	protein_coding	Bardet-Biedl syndrome 4 (human)
chr9	59251422	59260693	-	59253134	59260693	A3SS	0.5	50	50	ENSMUST00000214225.2	ENSMUSG00000025235.9	Bbs4	chr9	protein_coding	Bardet-Biedl syndrome 4 (human)
chr9	59303894	59313008	-	59303894;59310708	59310651;59313008	ES	0.5	50	50	ENSMUST00000171975.8	ENSMUSG00000025234.12	Arih1	chr9	protein_coding	ariadne RBR E3 ubiquitin protein ligase 1
chr9	59361752	59393499	-	59361752	59393262	A5SS	0.5	50	50	ENSMUST00000171975.8	ENSMUSG00000025234.12	Arih1	chr9	protein_coding	ariadne RBR E3 ubiquitin protein ligase 1
chr9	59315700	59319708	-	59313138	59319708	A3SS	0.5	50	50	ENSMUST00000026264.12	ENSMUSG00000025234.12	Arih1	chr9	protein_coding	ariadne RBR E3 ubiquitin protein ligase 1
chr9	59313138	59315159	-	59313138	59319708	A5SS	0.5	50	50	ENSMUST00000026264.12	ENSMUSG00000025234.12	Arih1	chr9	protein_coding	ariadne RBR E3 ubiquitin protein ligase 1
chr9	59432247;59432550	59432358;59432648	-	59432247	59432648	cassetteExon	0.5	100	100	ENSMUST00000055345.9	ENSMUSG00000049526.9	Tmem202	chr9	protein_coding	transmembrane protein 202
chr9	59427521	59432001	-	59427521	59446876	A5SS	0.5	50	50	ENSMUST00000214580.2	ENSMUSG00000049526.9	Tmem202	chr9	protein_coding	transmembrane protein 202
chr9	59489641	59509860	+	59489641;59497966	59497918;59509860	ES	0.5	50	50	ENSMUST00000143916.8	ENSMUSG00000032297.12	Celf6	chr9	protein_coding	CUGBP, Elav-like family member 6
chr9	59509988;59510162	59510083;59510278	+	59509988	59510278	cassetteExon	0.5	100	100	ENSMUST00000143916.8	ENSMUSG00000032297.12	Celf6	chr9	protein_coding	CUGBP, Elav-like family member 6
chr9	59510880;59511493	59511413;59511583	+	59510880;59511153	59511091;59511583	MXE	0.5	100	100	ENSMUST00000143916.8	ENSMUSG00000032297.12	Celf6	chr9	protein_coding	CUGBP, Elav-like family member 6
chr9	59510880;59511493	59511416;59511583	+	59510880;59511153	59511091;59511583	MXE	0.5	100	100	ENSMUST00000143916.8	ENSMUSG00000032297.12	Celf6	chr9	protein_coding	CUGBP, Elav-like family member 6
chr9	59511153;59511493	59511413;59511583	+	59511153	59511583	cassetteExon	0.5	100	100	ENSMUST00000143916.8	ENSMUSG00000032297.12	Celf6	chr9	protein_coding	CUGBP, Elav-like family member 6
chr9	59512395	59513272	+	59512395	59513263	A3SS	0.5	50	50	ENSMUST00000143916.8	ENSMUSG00000032297.12	Celf6	chr9	protein_coding	CUGBP, Elav-like family member 6
chr9	59496802	59497918	+	59489641	59497918	A5SS	0.5	50	50	ENSMUST00000143916.8	ENSMUSG00000032297.12	Celf6	chr9	protein_coding	CUGBP, Elav-like family member 6
chr9	59510880	59511413	+	59510880;59511153	59511091;59511413	ES	0.5	50	50	ENSMUST00000118549.8	ENSMUSG00000032297.12	Celf6	chr9	protein_coding	CUGBP, Elav-like family member 6
chr9	59510880	59511416	+	59510880	59511091	A3SS&ES	0.33	50	50	ENSMUST00000118549.8	ENSMUSG00000032297.12	Celf6	chr9	protein_coding	CUGBP, Elav-like family member 6
chr9	59510880	59511416	+	59510880	59511413	A3SS	0.33	50	50	ENSMUST00000034840.10	ENSMUSG00000032297.12	Celf6	chr9	protein_coding	CUGBP, Elav-like family member 6
chr9	59511153	59511583	+	59511493	59511583	5pMXE	0.5	50	50	ENSMUST00000129728.2	ENSMUSG00000032297.12	Celf6	chr9	protein_coding	CUGBP, Elav-like family member 6
chr9	59524691	59529632	+	59524691;59525990	59525751;59529632	ES	0.5	50	50	ENSMUST00000026267.16	ENSMUSG00000025237.17	Parp6	chr9	protein_coding	poly (ADP-ribose) polymerase family, member 6
chr9	59548379	59556113	+	59548379;59549093	59549024;59556113	ES	0.25	50	50	ENSMUST00000026267.16	ENSMUSG00000025237.17	Parp6	chr9	protein_coding	poly (ADP-ribose) polymerase family, member 6
chr9	59538676	59539033	+	59538676	59540199	A3SS	0.5	50	50	ENSMUST00000026267.16	ENSMUSG00000025237.17	Parp6	chr9	protein_coding	poly (ADP-ribose) polymerase family, member 6
chr9	59538052	59538623	+	59538112	59538623	A5SS	0.5	50	50	ENSMUST00000026267.16	ENSMUSG00000025237.17	Parp6	chr9	protein_coding	poly (ADP-ribose) polymerase family, member 6
chr9	59547432	59556113	+	59547432;59548379	59548307;59556113	ES	0.25	50	50	ENSMUST00000216351.2	ENSMUSG00000025237.17	Parp6	chr9	protein_coding	poly (ADP-ribose) polymerase family, member 6
chr9	59524691	59529632	+	59525990	59529632	5pMXE	0.5	50	50	ENSMUST00000167091.3	ENSMUSG00000025237.17	Parp6	chr9	protein_coding	poly (ADP-ribose) polymerase family, member 6
chr9	59549093	59556113	+	59547432	59556113	A5SS	0.25	50	50	ENSMUST00000167091.3	ENSMUSG00000025237.17	Parp6	chr9	protein_coding	poly (ADP-ribose) polymerase family, member 6
chr9	59547432	59556113	+	59547432;59549093	59548307;59556113	ES	0.25	50	50	ENSMUST00000216482.2	ENSMUSG00000025237.17	Parp6	chr9	protein_coding	poly (ADP-ribose) polymerase family, member 6
chr9	59548379	59556113	+	59549093	59556113	A5SS	0.25	50	50	ENSMUST00000216482.2	ENSMUSG00000025237.17	Parp6	chr9	protein_coding	poly (ADP-ribose) polymerase family, member 6
chr9	59544984;59547432	59547047;59556113	+	59544984	59556113	cassetteExon	0.5	100	100	ENSMUST00000214956.2	ENSMUSG00000025237.17	Parp6	chr9	protein_coding	poly (ADP-ribose) polymerase family, member 6
chr9	59548379	59556113	+	59544984	59556113	A5SS	0.25	50	50	ENSMUST00000214956.2	ENSMUSG00000025237.17	Parp6	chr9	protein_coding	poly (ADP-ribose) polymerase family, member 6
chr9	59549093	59556113	+	59544984	59556113	A5SS	0.25	50	50	ENSMUST00000214956.2	ENSMUSG00000025237.17	Parp6	chr9	protein_coding	poly (ADP-ribose) polymerase family, member 6
chr9	59563932;59564553	59564370;59572483	+	59563932	59572483	cassetteExon	0.5	100	100	ENSMUST00000034834.16	ENSMUSG00000032294.18	Pkm	chr9	protein_coding	pyruvate kinase, muscle
chr9	59563932;59564580	59564370;59572483	+	59563932	59572483	cassetteExon	0.5	100	100	ENSMUST00000034834.16	ENSMUSG00000032294.18	Pkm	chr9	protein_coding	pyruvate kinase, muscle
chr9	59563932;59570439	59570323;59572483	+	59563932	59572483	cassetteExon	0.5	100	100	ENSMUST00000034834.16	ENSMUSG00000032294.18	Pkm	chr9	protein_coding	pyruvate kinase, muscle
chr9	59579356;59582478	59582312;59585327	+	59579356;59583017	59582851;59585327	MXE	0.5	100	100	ENSMUST00000034834.16	ENSMUSG00000032294.18	Pkm	chr9	protein_coding	pyruvate kinase, muscle
chr9	59563981	59572483	+	59563932	59572483	A5SS	0.14	50	50	ENSMUST00000034834.16	ENSMUSG00000032294.18	Pkm	chr9	protein_coding	pyruvate kinase, muscle
chr9	59565832	59572483	+	59563932	59572483	A5SS	0.14	50	50	ENSMUST00000034834.16	ENSMUSG00000032294.18	Pkm	chr9	protein_coding	pyruvate kinase, muscle
chr9	59566436	59572483	+	59563932	59572483	A5SS	0.14	50	50	ENSMUST00000034834.16	ENSMUSG00000032294.18	Pkm	chr9	protein_coding	pyruvate kinase, muscle
chr9	59563932;59570439	59570323;59572483	+	59563932;59564553	59564370;59572483	MXE	0.5	100	100	ENSMUST00000215623.2	ENSMUSG00000032294.18	Pkm	chr9	protein_coding	pyruvate kinase, muscle
chr9	59564553;59566436	59566282;59572483	+	59564553	59572483	cassetteExon	0.5	100	100	ENSMUST00000215623.2	ENSMUSG00000032294.18	Pkm	chr9	protein_coding	pyruvate kinase, muscle
chr9	59563981	59572483	+	59564553	59572483	A5SS&ES	0.14	50	50	ENSMUST00000215623.2	ENSMUSG00000032294.18	Pkm	chr9	protein_coding	pyruvate kinase, muscle
chr9	59564580	59572483	+	59564553	59572483	A5SS	0.14	50	50	ENSMUST00000215623.2	ENSMUSG00000032294.18	Pkm	chr9	protein_coding	pyruvate kinase, muscle
chr9	59565832	59572483	+	59564553	59572483	A5SS	0.14	50	50	ENSMUST00000215623.2	ENSMUSG00000032294.18	Pkm	chr9	protein_coding	pyruvate kinase, muscle
chr9	59563932;59564580	59564370;59572483	+	59563932;59570439	59570323;59572483	MXE	0.5	100	100	ENSMUST00000215660.2	ENSMUSG00000032294.18	Pkm	chr9	protein_coding	pyruvate kinase, muscle
chr9	59563981	59572483	+	59570439	59572483	A5SS&ES	0.14	50	50	ENSMUST00000215660.2	ENSMUSG00000032294.18	Pkm	chr9	protein_coding	pyruvate kinase, muscle
chr9	59565832	59572483	+	59570439	59572483	A5SS&ES	0.14	50	50	ENSMUST00000215660.2	ENSMUSG00000032294.18	Pkm	chr9	protein_coding	pyruvate kinase, muscle
chr9	59566436	59572483	+	59570439	59572483	A5SS&ES	0.14	50	50	ENSMUST00000215660.2	ENSMUSG00000032294.18	Pkm	chr9	protein_coding	pyruvate kinase, muscle
chr9	59564580	59572483	+	59563981	59572483	A5SS	0.14	50	50	ENSMUST00000217353.2	ENSMUSG00000032294.18	Pkm	chr9	protein_coding	pyruvate kinase, muscle
chr9	59565832	59572483	+	59563981	59572483	A5SS	0.14	50	50	ENSMUST00000217353.2	ENSMUSG00000032294.18	Pkm	chr9	protein_coding	pyruvate kinase, muscle
chr9	59566436	59572483	+	59563981	59572483	A5SS	0.14	50	50	ENSMUST00000217353.2	ENSMUSG00000032294.18	Pkm	chr9	protein_coding	pyruvate kinase, muscle
chr9	59564580	59572483	+	59566436	59572483	A5SS&ES	0.2	50	50	ENSMUST00000216620.2	ENSMUSG00000032294.18	Pkm	chr9	protein_coding	pyruvate kinase, muscle
chr9	59565832	59572483	+	59566436	59572483	A5SS&ES	0.2	50	50	ENSMUST00000216620.2	ENSMUSG00000032294.18	Pkm	chr9	protein_coding	pyruvate kinase, muscle
chr9	59563932	59572483	+	59564580	59572483	5pMXE	0.14	50	50	ENSMUST00000217038.2	ENSMUSG00000032294.18	Pkm	chr9	protein_coding	pyruvate kinase, muscle
chr9	59565832	59572483	+	59564580	59572483	A5SS	0.14	50	50	ENSMUST00000217038.2	ENSMUSG00000032294.18	Pkm	chr9	protein_coding	pyruvate kinase, muscle
chr9	59570439	59572483	+	59564580	59572483	A5SS	0.14	50	50	ENSMUST00000217038.2	ENSMUSG00000032294.18	Pkm	chr9	protein_coding	pyruvate kinase, muscle
chr9	59579356	59582851	+	59579356	59582312	3pMXE	0.5	50	50	ENSMUST00000213220.2	ENSMUSG00000032294.18	Pkm	chr9	protein_coding	pyruvate kinase, muscle
chr9	59615042	59615283	+	59587535	59615283	A5SS	0.5	50	50	ENSMUST00000123914.8	ENSMUSG00000074259.11	Gramd2	chr9	protein_coding	GRAM domain containing 2
chr9	59619462	59621079	+	59619429	59621079	A5SS	0.5	50	50	ENSMUST00000123914.8	ENSMUSG00000074259.11	Gramd2	chr9	protein_coding	GRAM domain containing 2
chr9	59645151;59647315	59647223;59657861	-	59645151	59657861	cassetteExon	0.5	100	100	ENSMUST00000051039.5	ENSMUSG00000051705.14	Senp8	chr9	protein_coding	SUMO/sentrin specific peptidase 8
chr9	59645151;59647334	59647223;59657861	-	59645151	59657861	cassetteExon	0.5	100	100	ENSMUST00000051039.5	ENSMUSG00000051705.14	Senp8	chr9	protein_coding	SUMO/sentrin specific peptidase 8
chr9	59645151;59657654	59657545;59657861	-	59645151	59657861	cassetteExon	0.5	100	100	ENSMUST00000051039.5	ENSMUSG00000051705.14	Senp8	chr9	protein_coding	SUMO/sentrin specific peptidase 8
chr9	59645151;59647315	59647223;59657545	-	59645151	59657545	cassetteExon	0.5	100	100	ENSMUST00000177963.8	ENSMUSG00000051705.14	Senp8	chr9	protein_coding	SUMO/sentrin specific peptidase 8
chr9	59645151;59647315	59647223;59657861	-	59645151;59657654	59657545;59657861	MXE	0.5	100	100	ENSMUST00000177963.8	ENSMUSG00000051705.14	Senp8	chr9	protein_coding	SUMO/sentrin specific peptidase 8
chr9	59645151;59647334	59647223;59657545	-	59645151	59657545	cassetteExon	0.5	100	100	ENSMUST00000177963.8	ENSMUSG00000051705.14	Senp8	chr9	protein_coding	SUMO/sentrin specific peptidase 8
chr9	59645151;59647334	59647223;59657861	-	59645151;59657654	59657545;59657861	MXE	0.5	100	100	ENSMUST00000177963.8	ENSMUSG00000051705.14	Senp8	chr9	protein_coding	SUMO/sentrin specific peptidase 8
chr9	59647315;59657654	59657545;59657861	-	59647315	59657861	cassetteExon	0.5	100	100	ENSMUST00000163586.9	ENSMUSG00000051705.14	Senp8	chr9	protein_coding	SUMO/sentrin specific peptidase 8
chr9	59647334	59657861	-	59647315	59657861	A3SS	0.25	50	50	ENSMUST00000163586.9	ENSMUSG00000051705.14	Senp8	chr9	protein_coding	SUMO/sentrin specific peptidase 8
chr9	59647334	59657545	-	59647315	59657545	A3SS	0.33	50	50	ENSMUST00000217093.2	ENSMUSG00000051705.14	Senp8	chr9	protein_coding	SUMO/sentrin specific peptidase 8
chr9	59647334	59657861	-	59657654	59657861	A3SS&ES	0.25	50	50	ENSMUST00000217093.2	ENSMUSG00000051705.14	Senp8	chr9	protein_coding	SUMO/sentrin specific peptidase 8
chr9	59647334;59657654	59657545;59657861	-	59647334	59657861	cassetteExon	0.5	100	100	ENSMUST00000213257.2	ENSMUSG00000051705.14	Senp8	chr9	protein_coding	SUMO/sentrin specific peptidase 8
chr9	59647315	59657861	-	59657654	59657861	A3SS&ES	0.25	50	50	ENSMUST00000216045.2	ENSMUSG00000051705.14	Senp8	chr9	protein_coding	SUMO/sentrin specific peptidase 8
chr9	59781966	59791763	+	59781966;59782697	59782485;59791763	ES	0.5	50	50	ENSMUST00000136740.8	ENSMUSG00000039585.16	Myo9a	chr9	protein_coding	myosin IXa
chr9	59817990	59829006	+	59817990;59819873	59819820;59829006	ES	0.5	50	50	ENSMUST00000136740.8	ENSMUSG00000039585.16	Myo9a	chr9	protein_coding	myosin IXa
chr9	59791875	59792589	+	59791875	59796696	A3SS	0.5	50	50	ENSMUST00000136740.8	ENSMUSG00000039585.16	Myo9a	chr9	protein_coding	myosin IXa
chr9	59817990	59829006	+	59817990	59819820	3pMXE	0.5	50	50	ENSMUST00000127933.2	ENSMUSG00000039585.16	Myo9a	chr9	protein_coding	myosin IXa
chr9	59856099	59856208	-	59856107	59856208	A3SS	0.5	50	50	ENSMUST00000034831.3	ENSMUSG00000032292.9	Nr2e3	chr9	protein_coding	nuclear receptor subfamily 2, group E, member 3
chr9	59865388	59867882	-	59856311	59867882	A3SS	0.33	50	50	ENSMUST00000128060.8	ENSMUSG00000032292.9	Nr2e3	chr9	protein_coding	nuclear receptor subfamily 2, group E, member 3
chr9	59866748	59867882	-	59856311	59867882	A3SS	0.33	50	50	ENSMUST00000128060.8	ENSMUSG00000032292.9	Nr2e3	chr9	protein_coding	nuclear receptor subfamily 2, group E, member 3
chr9	59856311	59856465	-	59856311	59867882	A5SS	0.5	50	50	ENSMUST00000128060.8	ENSMUSG00000032292.9	Nr2e3	chr9	protein_coding	nuclear receptor subfamily 2, group E, member 3
chr9	59867943;59868697	59868349;59868907	-	59867943	59868907	cassetteExon	0.5	100	100	ENSMUST00000140263.8	ENSMUSG00000084847.8	Gm15507	chr9	lncRNA	predicted gene 15507
chr9	59866748	59867882	-	59865388	59867882	A3SS	0.33	50	50	ENSMUST00000140263.8	ENSMUSG00000084847.8	Gm15507	chr9	lncRNA	predicted gene 15507
chr9	59907320	59908624	-	59907320	59910134	A5SS	0.5	50	50	ENSMUST00000171654.8	ENSMUSG00000032289.16	Thsd4	chr9	protein_coding	thrombospondin, type I, domain containing 4
chr9	59964338	60048270	-	59964338	60159933	A5SS	0.5	50	50	ENSMUST00000171654.8	ENSMUSG00000032289.16	Thsd4	chr9	protein_coding	thrombospondin, type I, domain containing 4
chr9	60404488	60429149	-	60404488	60418124	5pMXE	0.5	50	50	ENSMUST00000098660.10	ENSMUSG00000032289.16	Thsd4	chr9	protein_coding	thrombospondin, type I, domain containing 4
chr9	60433778;60435713	60435599;60450479	-	60433778	60450479	cassetteExon	0.5	100	100	ENSMUST00000216749.2	ENSMUSG00000111761.2	9230112J17Rik	chr9	lncRNA	RIKEN cDNA 9230112J17 gene
chr9	60573715	60584363	-	60573715;60578644	60578578;60584363	ES	0.5	50	50	ENSMUST00000150060.8	ENSMUSG00000047766.16	Lrrc49	chr9	protein_coding	leucine rich repeat containing 49
chr9	60587454;60587985	60587788;60592318	-	60587454	60592318	cassetteExon	0.5	100	100	ENSMUST00000150060.8	ENSMUSG00000047766.16	Lrrc49	chr9	protein_coding	leucine rich repeat containing 49
chr9	60517704	60522377	-	60517704	60522282	A5SS	0.5	50	50	ENSMUST00000150060.8	ENSMUSG00000047766.16	Lrrc49	chr9	protein_coding	leucine rich repeat containing 49
chr9	60594478	60594694	-	60594478	60595095	A5SS	0.5	50	50	ENSMUST00000150060.8	ENSMUSG00000047766.16	Lrrc49	chr9	protein_coding	leucine rich repeat containing 49
chr9	60587454	60592318	-	60587985	60592318	3pMXE	0.5	50	50	ENSMUST00000132366.2	ENSMUSG00000047766.16	Lrrc49	chr9	protein_coding	leucine rich repeat containing 49
chr9	60761785	60763480	+	60761779	60763480	A5SS	0.5	50	50	ENSMUST00000214354.2	ENSMUSG00000034485.11	Uaca	chr9	protein_coding	uveal autoantigen with coiled-coil domains and ankyrin repeats
chr9	60961056	60962897	-	60958094	60962897	A3SS	0.5	50	50	ENSMUST00000217239.2	ENSMUSG00000111180.2	Gm39348	chr9	lncRNA	predicted gene, 39348
chr9	61017860	61018214	+	60989551	61018214	A5SS	0.5	50	50	ENSMUST00000215460.2	ENSMUSG00000111169.2	Gm34004	chr9	lncRNA	predicted gene, 34004
chr9	61309339	61314636	+	61309339;61314426	61314407;61314636	ES	0.33	50	50	ENSMUST00000178113.8	ENSMUSG00000032280.17	Tle3	chr9	protein_coding	transducin-like enhancer of split 3
chr9	61309339;61310750	61310734;61314636	+	61309339;61314426	61314407;61314636	MXE	0.5	100	100	ENSMUST00000178113.8	ENSMUSG00000032280.17	Tle3	chr9	protein_coding	transducin-like enhancer of split 3
chr9	61301994	61309138	+	61301994	61309135	A3SS	0.5	50	50	ENSMUST00000178113.8	ENSMUSG00000032280.17	Tle3	chr9	protein_coding	transducin-like enhancer of split 3
chr9	61280788	61281235	+	61280743	61281235	A5SS	0.33	50	50	ENSMUST00000178113.8	ENSMUSG00000032280.17	Tle3	chr9	protein_coding	transducin-like enhancer of split 3
chr9	61280841	61281235	+	61280743	61281235	A5SS	0.33	50	50	ENSMUST00000178113.8	ENSMUSG00000032280.17	Tle3	chr9	protein_coding	transducin-like enhancer of split 3
chr9	61301964	61309135	+	61301994	61309135	A5SS	0.5	50	50	ENSMUST00000178113.8	ENSMUSG00000032280.17	Tle3	chr9	protein_coding	transducin-like enhancer of split 3
chr9	61316662	61317218	+	61316698	61317218	A5SS	0.33	50	50	ENSMUST00000178113.8	ENSMUSG00000032280.17	Tle3	chr9	protein_coding	transducin-like enhancer of split 3
chr9	61316689	61317218	+	61316698	61317218	A5SS	0.33	50	50	ENSMUST00000178113.8	ENSMUSG00000032280.17	Tle3	chr9	protein_coding	transducin-like enhancer of split 3
chr9	61317402	61318545	+	61317417	61318545	A5SS	0.5	50	50	ENSMUST00000178113.8	ENSMUSG00000032280.17	Tle3	chr9	protein_coding	transducin-like enhancer of split 3
chr9	61309339	61314636	+	61309339;61310750	61310734;61314636	ES	0.33	50	50	ENSMUST00000159386.8	ENSMUSG00000032280.17	Tle3	chr9	protein_coding	transducin-like enhancer of split 3
chr9	61301964	61309138	+	61301964	61309135	A3SS	0.5	50	50	ENSMUST00000159386.8	ENSMUSG00000032280.17	Tle3	chr9	protein_coding	transducin-like enhancer of split 3
chr9	61316689	61317218	+	61316662	61317218	A5SS	0.33	50	50	ENSMUST00000159386.8	ENSMUSG00000032280.17	Tle3	chr9	protein_coding	transducin-like enhancer of split 3
chr9	61301994	61309138	+	61301964	61309138	A5SS	0.5	50	50	ENSMUST00000161993.8	ENSMUSG00000032280.17	Tle3	chr9	protein_coding	transducin-like enhancer of split 3
chr9	61280841	61281235	+	61280788	61281235	A5SS	0.33	50	50	ENSMUST00000160541.8	ENSMUSG00000032280.17	Tle3	chr9	protein_coding	transducin-like enhancer of split 3
chr9	61826252	61827157	-	61826252;61826975	61826894;61827157	ES	0.5	50	50	ENSMUST00000213159.2	ENSMUSG00000032254.11	Kif23	chr9	protein_coding	kinesin family member 23
chr9	61828528	61831914	-	61828528;61831498	61831187;61831914	ES	0.5	50	50	ENSMUST00000034815.9	ENSMUSG00000032254.11	Kif23	chr9	protein_coding	kinesin family member 23
chr9	61839469;61840552	61840511;61842662	-	61839469	61842662	cassetteExon	0.5	100	100	ENSMUST00000034815.9	ENSMUSG00000032254.11	Kif23	chr9	protein_coding	kinesin family member 23
chr9	61828528	61831914	-	61831498	61831914	3pMXE	0.5	50	50	ENSMUST00000216717.2	ENSMUSG00000032254.11	Kif23	chr9	protein_coding	kinesin family member 23
chr9	61883481	61896275	-	61871106	61896275	A3SS	0.5	50	50	ENSMUST00000135050.2	ENSMUSG00000032278.12	Paqr5	chr9	protein_coding	progestin and adipoQ receptor family member V
chr9	61871106	61876063	-	61871106	61896275	A5SS	0.5	50	50	ENSMUST00000135050.2	ENSMUSG00000032278.12	Paqr5	chr9	protein_coding	progestin and adipoQ receptor family member V
chr9	61883481	61883725	-	61883481	61896275	A5SS	0.5	50	50	ENSMUST00000034817.11	ENSMUSG00000032278.12	Paqr5	chr9	protein_coding	progestin and adipoQ receptor family member V
chr9	61977895	62029767	-	61977895;61995801	61995711;62029767	ES	0.5	50	50	ENSMUST00000185675.7	ENSMUSG00000032252.15	Glce	chr9	protein_coding	glucuronyl C5-epimerase
chr9	61989307	61995711	-	61977895	61995711	A3SS	0.5	50	50	ENSMUST00000185675.7	ENSMUSG00000032252.15	Glce	chr9	protein_coding	glucuronyl C5-epimerase
chr9	62248836	62279002	+	62248633	62279002	A5SS	0.11	50	50	ENSMUST00000138226.8	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62249292	62279002	+	62248633	62279002	A5SS	0.11	50	50	ENSMUST00000138226.8	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62249533	62279002	+	62248633	62279002	A5SS	0.11	50	50	ENSMUST00000138226.8	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62249785	62279002	+	62248633	62279002	A5SS	0.11	50	50	ENSMUST00000138226.8	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62251494	62279002	+	62248633	62279002	A5SS	0.11	50	50	ENSMUST00000138226.8	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62252169	62279002	+	62248633	62279002	A5SS	0.11	50	50	ENSMUST00000138226.8	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62274283	62279002	+	62248633	62279002	A5SS	0.11	50	50	ENSMUST00000138226.8	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62274625	62279002	+	62248633	62279002	A5SS	0.11	50	50	ENSMUST00000138226.8	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62249292	62279002	+	62248836	62279002	A5SS	0.11	50	50	ENSMUST00000085519.13	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62249533	62279002	+	62248836	62279002	A5SS	0.11	50	50	ENSMUST00000085519.13	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62249785	62279002	+	62248836	62279002	A5SS	0.11	50	50	ENSMUST00000085519.13	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62251494	62279002	+	62248836	62279002	A5SS	0.11	50	50	ENSMUST00000085519.13	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62252169	62279002	+	62248836	62279002	A5SS	0.11	50	50	ENSMUST00000085519.13	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62274283	62279002	+	62248836	62279002	A5SS	0.11	50	50	ENSMUST00000085519.13	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62274625	62279002	+	62248836	62279002	A5SS	0.11	50	50	ENSMUST00000085519.13	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62249533	62279002	+	62249292	62279002	A5SS	0.11	50	50	ENSMUST00000128636.8	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62249785	62279002	+	62249292	62279002	A5SS	0.11	50	50	ENSMUST00000128636.8	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62251494	62279002	+	62249292	62279002	A5SS	0.11	50	50	ENSMUST00000128636.8	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62252169	62279002	+	62249292	62279002	A5SS	0.11	50	50	ENSMUST00000128636.8	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62274283	62279002	+	62249292	62279002	A5SS	0.11	50	50	ENSMUST00000128636.8	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62274625	62279002	+	62249292	62279002	A5SS	0.11	50	50	ENSMUST00000128636.8	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62249785	62279002	+	62249533	62279002	A5SS	0.11	50	50	ENSMUST00000135395.8	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62251494	62279002	+	62249533	62279002	A5SS	0.11	50	50	ENSMUST00000135395.8	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62252169	62279002	+	62249533	62279002	A5SS	0.11	50	50	ENSMUST00000135395.8	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62274283	62279002	+	62249533	62279002	A5SS	0.11	50	50	ENSMUST00000135395.8	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62274625	62279002	+	62249533	62279002	A5SS	0.11	50	50	ENSMUST00000135395.8	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62251494	62279002	+	62249785	62279002	A5SS	0.11	50	50	ENSMUST00000156461.2	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62252169	62279002	+	62249785	62279002	A5SS	0.11	50	50	ENSMUST00000156461.2	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62274283	62279002	+	62249785	62279002	A5SS	0.11	50	50	ENSMUST00000156461.2	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62274625	62279002	+	62249785	62279002	A5SS	0.11	50	50	ENSMUST00000156461.2	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62252169	62279002	+	62251494	62279002	A5SS	0.11	50	50	ENSMUST00000141277.8	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62274283	62279002	+	62251494	62279002	A5SS	0.11	50	50	ENSMUST00000141277.8	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62274625	62279002	+	62251494	62279002	A5SS	0.11	50	50	ENSMUST00000141277.8	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62274283	62279002	+	62252169	62279002	A5SS	0.11	50	50	ENSMUST00000126451.8	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62274625	62279002	+	62252169	62279002	A5SS	0.11	50	50	ENSMUST00000126451.8	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62274283	62279002	+	62274625	62279002	A5SS	0.11	50	50	ENSMUST00000136603.8	ENSMUSG00000032249.15	Anp32a	chr9	protein_coding	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
chr9	62339788	62356362	-	62339788	62361811	A5SS	0.5	50	50	ENSMUST00000048043.12	ENSMUSG00000041729.16	Coro2b	chr9	protein_coding	coronin, actin binding protein, 2B
chr9	62396723	62417746	-	62396723	62443935	A5SS	0.33	50	50	ENSMUST00000048043.12	ENSMUSG00000041729.16	Coro2b	chr9	protein_coding	coronin, actin binding protein, 2B
chr9	62396723	62427654	-	62396723	62443935	A5SS	0.33	50	50	ENSMUST00000048043.12	ENSMUSG00000041729.16	Coro2b	chr9	protein_coding	coronin, actin binding protein, 2B
chr9	62396723	62427654	-	62396723	62417746	5pMXE	0.33	50	50	ENSMUST00000164246.9	ENSMUSG00000041729.16	Coro2b	chr9	protein_coding	coronin, actin binding protein, 2B
chr9	62746236;62747873	62747767;62751852	+	62746236	62751852	cassetteExon	0.5	100	100	ENSMUST00000034776.13	ENSMUSG00000032245.13	Cln6	chr9	protein_coding	ceroid-lipofuscinosis, neuronal 6
chr9	62753334	62754189	+	62753334	62754248	A3SS	0.5	50	50	ENSMUST00000034776.13	ENSMUSG00000032245.13	Cln6	chr9	protein_coding	ceroid-lipofuscinosis, neuronal 6
chr9	62754922	62756265	+	62754922	62756391	A3SS	0.5	50	50	ENSMUST00000034776.13	ENSMUSG00000032245.13	Cln6	chr9	protein_coding	ceroid-lipofuscinosis, neuronal 6
chr9	62756513	62757899	+	62756390	62757899	A5SS	0.5	50	50	ENSMUST00000124984.2	ENSMUSG00000032245.13	Cln6	chr9	protein_coding	ceroid-lipofuscinosis, neuronal 6
chr9	62758083	62775168	-	62758083	62769192	5pMXE	0.5	50	50	ENSMUST00000132250.8	ENSMUSG00000074250.12	Gm10653	chr9	transcribed_processed_pseudogene	predicted gene 10653
chr9	62765443;62765554	62765524;62778548	+	62765443	62778548	cassetteExon	0.5	100	100	ENSMUST00000213643.2	ENSMUSG00000032246.15	Calml4	chr9	protein_coding	calmodulin-like 4
chr9	62765443;62776099	62775959;62778548	+	62765443	62778548	cassetteExon	0.5	100	100	ENSMUST00000213643.2	ENSMUSG00000032246.15	Calml4	chr9	protein_coding	calmodulin-like 4
chr9	62778736	62782741	+	62778736	62782759	A3SS	0.5	50	50	ENSMUST00000213643.2	ENSMUSG00000032246.15	Calml4	chr9	protein_coding	calmodulin-like 4
chr9	62765443	62775959	+	62765443;62765554	62765524;62775959	ES	0.5	50	50	ENSMUST00000034777.14	ENSMUSG00000032246.15	Calml4	chr9	protein_coding	calmodulin-like 4
chr9	62765554	62778548	+	62765554;62776099	62775959;62778548	ES	0.33	50	50	ENSMUST00000034777.14	ENSMUSG00000032246.15	Calml4	chr9	protein_coding	calmodulin-like 4
chr9	62765443;62776099	62775959;62778548	+	62765443;62765554	62765524;62778548	MXE	0.5	100	100	ENSMUST00000163820.3	ENSMUSG00000032246.15	Calml4	chr9	protein_coding	calmodulin-like 4
chr9	62859482	62895138	-	62859482	62888130	5pMXE	0.5	50	50	ENSMUST00000098651.6	ENSMUSG00000032405.11	Pias1	chr9	protein_coding	protein inhibitor of activated STAT 1
chr9	62788545	62792054	-	62789543	62792054	A3SS	0.33	50	50	ENSMUST00000098651.6	ENSMUSG00000032405.11	Pias1	chr9	protein_coding	protein inhibitor of activated STAT 1
chr9	62790979	62792054	-	62789543	62792054	A3SS	0.33	50	50	ENSMUST00000098651.6	ENSMUSG00000032405.11	Pias1	chr9	protein_coding	protein inhibitor of activated STAT 1
chr9	62790979	62792054	-	62788545	62792054	A3SS	0.33	50	50	ENSMUST00000215501.2	ENSMUSG00000032405.11	Pias1	chr9	protein_coding	protein inhibitor of activated STAT 1
chr9	63053860	63056142	-	63053860	63054173	5pMXE	0.33	50	50	ENSMUST00000119146.8	ENSMUSG00000022245.16	Skor1	chr9	protein_coding	SKI family transcriptional corepressor 1
chr9	63053860	63054089	-	63053860	63054173	A5SS	0.33	50	50	ENSMUST00000119146.8	ENSMUSG00000022245.16	Skor1	chr9	protein_coding	SKI family transcriptional corepressor 1
chr9	63053860	63054089	-	63053860	63056142	A5SS	0.33	50	50	ENSMUST00000116613.9	ENSMUSG00000022245.16	Skor1	chr9	protein_coding	SKI family transcriptional corepressor 1
chr9	63247715	63250669	-	63246403	63250669	A3SS	0.5	50	50	ENSMUST00000034920.11	ENSMUSG00000058444.9	Map2k5	chr9	protein_coding	mitogen-activated protein kinase kinase 5
chr9	63301957	63306158	-	63301957	63305794	5pMXE	0.33	50	50	ENSMUST00000186165.2	ENSMUSG00000032403.9	2300009A05Rik	chr9	protein_coding	RIKEN cDNA 2300009A05 gene
chr9	63301957	63305826	-	63301957	63305794	A5SS	0.33	50	50	ENSMUST00000186165.2	ENSMUSG00000032403.9	2300009A05Rik	chr9	protein_coding	RIKEN cDNA 2300009A05 gene
chr9	63301957	63305826	-	63301957	63306158	A5SS	0.33	50	50	ENSMUST00000168665.3	ENSMUSG00000032403.9	2300009A05Rik	chr9	protein_coding	RIKEN cDNA 2300009A05 gene
chr9	63388052	63473929	+	63388052	63397534	3pMXE	0.5	50	50	ENSMUST00000191455.7	ENSMUSG00000086539.9	Gm16759	chr9	lncRNA	predicted gene, 16759
chr9	63368165	63387869	+	63384703	63387869	A5SS&ES	0.5	50	50	ENSMUST00000191455.7	ENSMUSG00000086539.9	Gm16759	chr9	lncRNA	predicted gene, 16759
chr9	63306734	63332669	+	63306734	63367572	A3SS	0.5	50	50	ENSMUST00000126238.3	ENSMUSG00000086539.9	Gm16759	chr9	lncRNA	predicted gene, 16759
chr9	63438689	63473929	+	63388052	63473929	A5SS	0.5	50	50	ENSMUST00000126238.3	ENSMUSG00000086539.9	Gm16759	chr9	lncRNA	predicted gene, 16759
chr9	63336356	63361842	-	63336356;63352878	63352756;63361842	ES	0.33	50	50	ENSMUST00000042322.11	ENSMUSG00000037801.14	Iqch	chr9	protein_coding	IQ motif containing H
chr9	63455300	63495612	-	63455300;63480010	63479894;63495612	ES	0.5	50	50	ENSMUST00000042322.11	ENSMUSG00000037801.14	Iqch	chr9	protein_coding	IQ motif containing H
chr9	63352791	63361842	-	63352878	63361842	A3SS	0.33	50	50	ENSMUST00000042322.11	ENSMUSG00000037801.14	Iqch	chr9	protein_coding	IQ motif containing H
chr9	63336356	63361842	-	63336356;63352791	63352756;63361842	ES	0.33	50	50	ENSMUST00000163982.8	ENSMUSG00000037801.14	Iqch	chr9	protein_coding	IQ motif containing H
chr9	63389969	63403326	-	63336356	63403326	A3SS	0.5	50	50	ENSMUST00000080527.12	ENSMUSG00000037801.14	Iqch	chr9	protein_coding	IQ motif containing H
chr9	63336356	63352756	-	63336356	63403326	A5SS	0.33	50	50	ENSMUST00000080527.12	ENSMUSG00000037801.14	Iqch	chr9	protein_coding	IQ motif containing H
chr9	63336356	63361842	-	63336356	63403326	A5SS	0.33	50	50	ENSMUST00000080527.12	ENSMUSG00000037801.14	Iqch	chr9	protein_coding	IQ motif containing H
chr9	63526513	63543666	+	63526513;63542669	63542587;63543666	ES	0.5	50	50	ENSMUST00000041551.9	ENSMUSG00000037257.9	Aagab	chr9	protein_coding	alpha- and gamma-adaptin binding protein
chr9	63573504	63573756	-	63573504	63574757	A5SS	0.5	50	50	ENSMUST00000034973.10	ENSMUSG00000032402.13	Smad3	chr9	protein_coding	SMAD family member 3
chr9	63575204	63619198	-	63575204	63664754	A5SS	0.25	50	50	ENSMUST00000034973.10	ENSMUSG00000032402.13	Smad3	chr9	protein_coding	SMAD family member 3
chr9	63575204	63650252	-	63575204	63664754	A5SS	0.25	50	50	ENSMUST00000034973.10	ENSMUSG00000032402.13	Smad3	chr9	protein_coding	SMAD family member 3
chr9	63575204	63658332	-	63575204	63664754	A5SS	0.25	50	50	ENSMUST00000034973.10	ENSMUSG00000032402.13	Smad3	chr9	protein_coding	SMAD family member 3
chr9	63575204	63650252	-	63575204	63619198	5pMXE	0.25	50	50	ENSMUST00000154323.8	ENSMUSG00000032402.13	Smad3	chr9	protein_coding	SMAD family member 3
chr9	63575204	63658332	-	63575204	63619198	5pMXE	0.25	50	50	ENSMUST00000154323.8	ENSMUSG00000032402.13	Smad3	chr9	protein_coding	SMAD family member 3
chr9	63575204	63650252	-	63575204	63658332	A5SS	0.25	50	50	ENSMUST00000133108.3	ENSMUSG00000032402.13	Smad3	chr9	protein_coding	SMAD family member 3
chr9	63834495	63834734	-	63834495	63844323	A5SS	0.5	50	50	ENSMUST00000214004.2	ENSMUSG00000111058.2	Gm36033	chr9	lncRNA	predicted gene, 36033
chr9	63861338;63896832	63896754;63914813	-	63861338	63914813	cassetteExon	0.5	100	100	ENSMUST00000041029.6	ENSMUSG00000036867.8	Smad6	chr9	protein_coding	SMAD family member 6
chr9	63919553	63924115	-	63919553	63927487	A5SS	0.5	50	50	ENSMUST00000041029.6	ENSMUSG00000036867.8	Smad6	chr9	protein_coding	SMAD family member 6
chr9	64029700	64034120	+	64029700;64034037	64033983;64034120	ES	0.5	50	50	ENSMUST00000034969.14	ENSMUSG00000032401.16	Lctl	chr9	protein_coding	lactase-like
chr9	64025130	64025265	+	64025130	64026062	A3SS	0.5	50	50	ENSMUST00000034969.14	ENSMUSG00000032401.16	Lctl	chr9	protein_coding	lactase-like
chr9	64042197	64045191	+	64042197	64045088	A3SS	0.5	50	50	ENSMUST00000034969.14	ENSMUSG00000032401.16	Lctl	chr9	protein_coding	lactase-like
chr9	64028962	64029388	+	64027130	64029388	A5SS	0.5	50	50	ENSMUST00000034969.14	ENSMUSG00000032401.16	Lctl	chr9	protein_coding	lactase-like
chr9	64063388	64068103	-	64063388;64066048	64065977;64068103	ES	0.5	50	50	ENSMUST00000122091.8	ENSMUSG00000032400.19	Zwilch	chr9	protein_coding	zwilch kinetochore protein
chr9	64070045	64072645	-	64070045;64071747	64071629;64072645	ES	0.25	50	50	ENSMUST00000122091.8	ENSMUSG00000032400.19	Zwilch	chr9	protein_coding	zwilch kinetochore protein
chr9	64072740	64080100	-	64072740;64075946	64075895;64080100	ES	0.33	50	50	ENSMUST00000122091.8	ENSMUSG00000032400.19	Zwilch	chr9	protein_coding	zwilch kinetochore protein
chr9	64054688;64056616	64056548;64056681	-	64054688	64056681	cassetteExon	0.5	100	100	ENSMUST00000122091.8	ENSMUSG00000032400.19	Zwilch	chr9	protein_coding	zwilch kinetochore protein
chr9	64071747;64071994	64071872;64072645	-	64071747	64072645	cassetteExon	0.5	100	100	ENSMUST00000122091.8	ENSMUSG00000032400.19	Zwilch	chr9	protein_coding	zwilch kinetochore protein
chr9	64075946;64078809	64078751;64080100	-	64075946	64080100	cassetteExon	0.5	100	100	ENSMUST00000122091.8	ENSMUSG00000032400.19	Zwilch	chr9	protein_coding	zwilch kinetochore protein
chr9	64054220	64054552	-	64054202	64054552	A3SS	0.5	50	50	ENSMUST00000122091.8	ENSMUSG00000032400.19	Zwilch	chr9	protein_coding	zwilch kinetochore protein
chr9	64070041	64072645	-	64071747	64072645	A3SS&ES	0.25	50	50	ENSMUST00000122091.8	ENSMUSG00000032400.19	Zwilch	chr9	protein_coding	zwilch kinetochore protein
chr9	64078809	64080100	-	64072740	64080100	A3SS	0.33	50	50	ENSMUST00000176299.8	ENSMUSG00000032400.19	Zwilch	chr9	protein_coding	zwilch kinetochore protein
chr9	64070045;64071994	64071629;64072645	-	64070045	64072645	cassetteExon	0.5	100	100	ENSMUST00000176378.9	ENSMUSG00000032400.19	Zwilch	chr9	protein_coding	zwilch kinetochore protein
chr9	64070041	64072645	-	64070045	64072645	A3SS	0.25	50	50	ENSMUST00000176378.9	ENSMUSG00000032400.19	Zwilch	chr9	protein_coding	zwilch kinetochore protein
chr9	64071994	64072645	-	64070041	64072645	A3SS	0.25	50	50	ENSMUST00000130127.8	ENSMUSG00000032400.19	Zwilch	chr9	protein_coding	zwilch kinetochore protein
chr9	64072740	64080100	-	64075946	64080100	3pMXE	0.33	50	50	ENSMUST00000151428.2	ENSMUSG00000032400.19	Zwilch	chr9	protein_coding	zwilch kinetochore protein
chr9	64101108	64102866	-	64101108	64111713	A5SS	0.5	50	50	ENSMUST00000005066.9	ENSMUSG00000004936.9	Map2k1	chr9	protein_coding	mitogen-activated protein kinase kinase 1
chr9	64188929	64195396	+	64188929	64195390	A3SS	0.5	50	50	ENSMUST00000215031.2	ENSMUSG00000032397.8	Tipin	chr9	protein_coding	timeless interacting protein
chr9	64188934	64195390	+	64188929	64195390	A5SS	0.5	50	50	ENSMUST00000215031.2	ENSMUSG00000032397.8	Tipin	chr9	protein_coding	timeless interacting protein
chr9	64188934	64195396	+	64188929	64195396	A5SS	0.5	50	50	ENSMUST00000213165.2	ENSMUSG00000032397.8	Tipin	chr9	protein_coding	timeless interacting protein
chr9	64188934	64195396	+	64188934	64195390	A3SS	0.5	50	50	ENSMUST00000213289.2	ENSMUSG00000032397.8	Tipin	chr9	protein_coding	timeless interacting protein
chr9	64244029	64246761	-	64238197	64246761	A3SS	0.5	50	50	ENSMUST00000168844.9	ENSMUSG00000032396.18	Dis3l	chr9	protein_coding	DIS3 like exosome 3'-5' exoribonuclease
chr9	64238197	64243095	-	64238197	64246761	A5SS	0.5	50	50	ENSMUST00000168844.9	ENSMUSG00000032396.18	Dis3l	chr9	protein_coding	DIS3 like exosome 3'-5' exoribonuclease
chr9	64246914	64247571	-	64246914	64248275	A5SS	0.33	50	50	ENSMUST00000168844.9	ENSMUSG00000032396.18	Dis3l	chr9	protein_coding	DIS3 like exosome 3'-5' exoribonuclease
chr9	64246914	64247830	-	64246914	64248275	A5SS	0.33	50	50	ENSMUST00000168844.9	ENSMUSG00000032396.18	Dis3l	chr9	protein_coding	DIS3 like exosome 3'-5' exoribonuclease
chr9	64246914	64247830	-	64246914	64247571	5pMXE	0.33	50	50	ENSMUST00000113890.2	ENSMUSG00000032396.18	Dis3l	chr9	protein_coding	DIS3 like exosome 3'-5' exoribonuclease
chr9	64607435	64613009	+	64607435	64607645	3pMXE	0.5	50	50	ENSMUST00000093829.9	ENSMUSG00000036466.18	Megf11	chr9	protein_coding	multiple EGF-like-domains 11
chr9	64416090;64451968	64451876;64545517	+	64416090	64545517	cassetteExon	0.5	100	100	ENSMUST00000093829.9	ENSMUSG00000036466.18	Megf11	chr9	protein_coding	multiple EGF-like-domains 11
chr9	64597412;64598631	64598503;64599077	+	64597412	64599077	cassetteExon	0.5	100	100	ENSMUST00000093829.9	ENSMUSG00000036466.18	Megf11	chr9	protein_coding	multiple EGF-like-domains 11
chr9	64601279;64602391	64602296;64602646	+	64601279	64602646	cassetteExon	0.5	100	100	ENSMUST00000093829.9	ENSMUSG00000036466.18	Megf11	chr9	protein_coding	multiple EGF-like-domains 11
chr9	64416090	64416259	+	64416090	64545517	A3SS	0.33	50	50	ENSMUST00000093829.9	ENSMUSG00000036466.18	Megf11	chr9	protein_coding	multiple EGF-like-domains 11
chr9	64408642	64408805	+	64293110	64408805	A5SS	0.5	50	50	ENSMUST00000093829.9	ENSMUSG00000036466.18	Megf11	chr9	protein_coding	multiple EGF-like-domains 11
chr9	64454305	64545517	+	64416090	64545517	A5SS	0.33	50	50	ENSMUST00000093829.9	ENSMUSG00000036466.18	Megf11	chr9	protein_coding	multiple EGF-like-domains 11
chr9	64416090	64416259	+	64416090	64451876	A3SS	0.33	50	50	ENSMUST00000118485.8	ENSMUSG00000036466.18	Megf11	chr9	protein_coding	multiple EGF-like-domains 11
chr9	64601279	64602296	+	64601279	64607379	A3SS	0.33	50	50	ENSMUST00000118485.8	ENSMUSG00000036466.18	Megf11	chr9	protein_coding	multiple EGF-like-domains 11
chr9	64601279	64602646	+	64601279	64607379	A3SS	0.33	50	50	ENSMUST00000118485.8	ENSMUSG00000036466.18	Megf11	chr9	protein_coding	multiple EGF-like-domains 11
chr9	64454305	64545517	+	64451968	64545517	A5SS	0.33	50	50	ENSMUST00000118485.8	ENSMUSG00000036466.18	Megf11	chr9	protein_coding	multiple EGF-like-domains 11
chr9	64605190	64607379	+	64601279	64607379	A5SS	0.5	50	50	ENSMUST00000118485.8	ENSMUSG00000036466.18	Megf11	chr9	protein_coding	multiple EGF-like-domains 11
chr9	64593308	64593645	+	64593308	64599077	A3SS	0.5	50	50	ENSMUST00000124881.2	ENSMUSG00000036466.18	Megf11	chr9	protein_coding	multiple EGF-like-domains 11
chr9	64597412	64599077	+	64593308	64599077	A5SS	0.33	50	50	ENSMUST00000124881.2	ENSMUSG00000036466.18	Megf11	chr9	protein_coding	multiple EGF-like-domains 11
chr9	64598631	64599077	+	64593308	64599077	A5SS	0.33	50	50	ENSMUST00000124881.2	ENSMUSG00000036466.18	Megf11	chr9	protein_coding	multiple EGF-like-domains 11
chr9	64624270	64633906	-	64624270;64632864	64632784;64633906	ES	0.5	50	50	ENSMUST00000172298.8	ENSMUSG00000004771.13	Rab11a	chr9	protein_coding	RAB11A, member RAS oncogene family
chr9	64634099	64644866	-	64634099;64635711	64635516;64644866	ES	0.33	50	50	ENSMUST00000172298.8	ENSMUSG00000004771.13	Rab11a	chr9	protein_coding	RAB11A, member RAS oncogene family
chr9	64624270	64632735	-	64624270	64632784	A5SS	0.33	50	50	ENSMUST00000172298.8	ENSMUSG00000004771.13	Rab11a	chr9	protein_coding	RAB11A, member RAS oncogene family
chr9	64632864	64633639	-	64632864	64633906	A5SS	0.33	50	50	ENSMUST00000172298.8	ENSMUSG00000004771.13	Rab11a	chr9	protein_coding	RAB11A, member RAS oncogene family
chr9	64635711	64643422	-	64635711	64644866	A5SS	0.5	50	50	ENSMUST00000172298.8	ENSMUSG00000004771.13	Rab11a	chr9	protein_coding	RAB11A, member RAS oncogene family
chr9	64624270;64634099	64633906;64644866	-	64624270;64632864	64632784;64644866	MXE	0.5	100	100	ENSMUST00000167569.8	ENSMUSG00000004771.13	Rab11a	chr9	protein_coding	RAB11A, member RAS oncogene family
chr9	64632864;64634099	64633639;64644866	-	64632864	64644866	cassetteExon	0.5	100	100	ENSMUST00000167569.8	ENSMUSG00000004771.13	Rab11a	chr9	protein_coding	RAB11A, member RAS oncogene family
chr9	64632864;64634099	64633906;64644866	-	64632864	64644866	cassetteExon	0.5	100	100	ENSMUST00000167569.8	ENSMUSG00000004771.13	Rab11a	chr9	protein_coding	RAB11A, member RAS oncogene family
chr9	64635711	64644866	-	64632864	64644866	A3SS	0.33	50	50	ENSMUST00000167569.8	ENSMUSG00000004771.13	Rab11a	chr9	protein_coding	RAB11A, member RAS oncogene family
chr9	64624270	64633906	-	64624270	64632784	5pMXE	0.33	50	50	ENSMUST00000172444.2	ENSMUSG00000004771.13	Rab11a	chr9	protein_coding	RAB11A, member RAS oncogene family
chr9	64624270	64633906	-	64624270;64632864	64632735;64633906	ES	0.5	50	50	ENSMUST00000168366.2	ENSMUSG00000004771.13	Rab11a	chr9	protein_coding	RAB11A, member RAS oncogene family
chr9	64632864	64644866	-	64632864	64633906	5pMXE	0.33	50	50	ENSMUST00000168366.2	ENSMUSG00000004771.13	Rab11a	chr9	protein_coding	RAB11A, member RAS oncogene family
chr9	64632864	64644866	-	64632864	64633639	5pMXE	0.33	50	50	ENSMUST00000166857.2	ENSMUSG00000004771.13	Rab11a	chr9	protein_coding	RAB11A, member RAS oncogene family
chr9	64624270	64633906	-	64632864	64633906	A3SS&ES	0.5	50	50	ENSMUST00000169058.8	ENSMUSG00000004771.13	Rab11a	chr9	protein_coding	RAB11A, member RAS oncogene family
chr9	64624270;64632864	64632735;64644866	-	64624270;64635711	64633906;64644866	MXE	0.5	100	100	ENSMUST00000004892.7	ENSMUSG00000004771.13	Rab11a	chr9	protein_coding	RAB11A, member RAS oncogene family
chr9	64624270;64632864	64632784;64644866	-	64624270;64635711	64633906;64644866	MXE	0.5	100	100	ENSMUST00000004892.7	ENSMUSG00000004771.13	Rab11a	chr9	protein_coding	RAB11A, member RAS oncogene family
chr9	64742634	64746095	+	64742634;64743363	64743236;64746095	ES	0.5	50	50	ENSMUST00000038890.6	ENSMUSG00000053641.10	Dennd4a	chr9	protein_coding	DENN/MADD domain containing 4A
chr9	64742634;64742868	64742790;64743236	+	64742634	64743236	cassetteExon	0.5	100	100	ENSMUST00000038890.6	ENSMUSG00000053641.10	Dennd4a	chr9	protein_coding	DENN/MADD domain containing 4A
chr9	64742634	64742790	+	64742634	64746095	A3SS	0.33	50	50	ENSMUST00000214001.2	ENSMUSG00000053641.10	Dennd4a	chr9	protein_coding	DENN/MADD domain containing 4A
chr9	64868539	64868976	+	64868220	64868976	A5SS	0.5	50	50	ENSMUST00000170517.9	ENSMUSG00000034263.14	Ints14	chr9	protein_coding	integrator complex subunit 14
chr9	64960455	64961701	+	64960455;64961112	64961051;64961701	ES	0.5	50	50	ENSMUST00000034960.14	ENSMUSG00000032393.16	Dpp8	chr9	protein_coding	dipeptidylpeptidase 8
chr9	64985387	64988013	+	64985387;64986067	64985956;64988013	ES	0.5	50	50	ENSMUST00000034960.14	ENSMUSG00000032393.16	Dpp8	chr9	protein_coding	dipeptidylpeptidase 8
chr9	64940208	64942157	+	64939905	64942157	A5SS	0.5	50	50	ENSMUST00000034960.14	ENSMUSG00000032393.16	Dpp8	chr9	protein_coding	dipeptidylpeptidase 8
chr9	64982410	64983018	+	64981867	64983018	A5SS	0.5	50	50	ENSMUST00000034960.14	ENSMUSG00000032393.16	Dpp8	chr9	protein_coding	dipeptidylpeptidase 8
chr9	65021723	65025999	+	65021723	65027500	A3SS	0.5	50	50	ENSMUST00000213533.2	ENSMUSG00000032816.16	Igdcc4	chr9	protein_coding	immunoglobulin superfamily, DCC subclass, member 4
chr9	65032704	65034037	+	65032704	65034040	A3SS	0.5	50	50	ENSMUST00000213533.2	ENSMUSG00000032816.16	Igdcc4	chr9	protein_coding	immunoglobulin superfamily, DCC subclass, member 4
chr9	65090386	65091055	+	65090386	65091115	A3SS	0.5	50	50	ENSMUST00000034961.6	ENSMUSG00000032394.7	Igdcc3	chr9	protein_coding	immunoglobulin superfamily, DCC subclass, member 3
chr9	65141122;65143223	65143119;65143923	+	65141122	65143923	cassetteExon	0.5	100	100	ENSMUST00000216702.2	ENSMUSG00000032392.12	Parp16	chr9	protein_coding	poly (ADP-ribose) polymerase family, member 16
chr9	65122145	65122631	+	65102757	65122631	A5SS	0.5	50	50	ENSMUST00000216702.2	ENSMUSG00000032392.12	Parp16	chr9	protein_coding	poly (ADP-ribose) polymerase family, member 16
chr9	65176899;65177302	65177204;65177413	+	65176899	65177413	cassetteExon	0.5	100	100	ENSMUST00000048762.8	ENSMUSG00000042254.15	Cilp	chr9	protein_coding	cartilage intermediate layer protein, nucleotide pyrophosphohydrolase
chr9	65217593	65223926	+	65217593;65219421	65219380;65223926	ES	0.5	50	50	ENSMUST00000015501.11	ENSMUSG00000015357.11	Clpx	chr9	protein_coding	caseinolytic mitochondrial matrix peptidase chaperone subunit
chr9	65264087	65264640	+	65264087	65265876	A3SS	0.5	50	50	ENSMUST00000048184.4	ENSMUSG00000041837.5	Pdcd7	chr9	protein_coding	programmed cell death 7
chr9	65268369	65276385	+	65268369	65273347	3pMXE	0.5	50	50	ENSMUST00000217103.2	ENSMUSG00000086228.4	Ubap1l	chr9	protein_coding	ubiquitin-associated protein 1-like
chr9	65275978	65276385	+	65268369	65276385	A5SS	0.5	50	50	ENSMUST00000147185.3	ENSMUSG00000086228.4	Ubap1l	chr9	protein_coding	ubiquitin-associated protein 1-like
chr9	65305949	65308201	+	65305949;65307079	65306576;65308201	ES	0.5	50	50	ENSMUST00000217172.2	ENSMUSG00000041696.15	Rasl12	chr9	protein_coding	RAS-like, family 12
chr9	65315782	65320689	+	65315782	65318063	3pMXE	0.5	50	50	ENSMUST00000217172.2	ENSMUSG00000041696.15	Rasl12	chr9	protein_coding	RAS-like, family 12
chr9	65305949	65306576	+	65305949	65308201	A3SS	0.5	50	50	ENSMUST00000215605.2	ENSMUSG00000041696.15	Rasl12	chr9	protein_coding	RAS-like, family 12
chr9	65307079	65308201	+	65305949	65308201	A5SS	0.5	50	50	ENSMUST00000215605.2	ENSMUSG00000041696.15	Rasl12	chr9	protein_coding	RAS-like, family 12
chr9	65349081	65351161	+	65348970	65351161	A5SS	0.5	50	50	ENSMUST00000074792.7	ENSMUSG00000059183.13	Mtfmt	chr9	protein_coding	mitochondrial methionyl-tRNA formyltransferase
chr9	65370186	65372546	+	65368436	65372546	A5SS	0.5	50	50	ENSMUST00000034955.8	ENSMUSG00000032388.8	Spg21	chr9	protein_coding	SPG21, maspardin
chr9	65408796	65409467	-	65398285	65409467	A3SS	0.5	50	50	ENSMUST00000217144.2	ENSMUSG00000066510.6	Ankdd1a	chr9	protein_coding	ankyrin repeat and death domain containing 1A
chr9	65410852	65411375	-	65410795	65411375	A3SS	0.5	50	50	ENSMUST00000061766.6	ENSMUSG00000066510.6	Ankdd1a	chr9	protein_coding	ankyrin repeat and death domain containing 1A
chr9	65466806	65469092	-	65466806	65471166	A5SS	0.5	50	50	ENSMUST00000214740.2	ENSMUSG00000050721.10	Plekho2	chr9	protein_coding	pleckstrin homology domain containing, family O member 2
chr9	65480411	65484340	-	65480411	65483920	A5SS&ES	0.5	50	50	ENSMUST00000214740.2	ENSMUSG00000050721.10	Plekho2	chr9	protein_coding	pleckstrin homology domain containing, family O member 2
chr9	65480411	65487220	-	65480411	65484340	5pMXE	0.33	50	50	ENSMUST00000213554.2	ENSMUSG00000050721.10	Plekho2	chr9	protein_coding	pleckstrin homology domain containing, family O member 2
chr9	65480411	65483920	-	65480411	65487220	A5SS	0.33	50	50	ENSMUST00000068944.9	ENSMUSG00000050721.10	Plekho2	chr9	protein_coding	pleckstrin homology domain containing, family O member 2
chr9	65494533	65494894	+	65494533	65494866	A3SS	0.5	50	50	ENSMUST00000134538.9	ENSMUSG00000041064.15	Pif1	chr9	protein_coding	PIF1 5'-to-3' DNA helicase
chr9	65497336	65498969	+	65497336	65499002	A3SS	0.5	50	50	ENSMUST00000134538.9	ENSMUSG00000041064.15	Pif1	chr9	protein_coding	PIF1 5'-to-3' DNA helicase
chr9	65494580	65494866	+	65494533	65494866	A5SS	0.5	50	50	ENSMUST00000134538.9	ENSMUSG00000041064.15	Pif1	chr9	protein_coding	PIF1 5'-to-3' DNA helicase
chr9	65494580	65494894	+	65494580	65494866	A3SS	0.5	50	50	ENSMUST00000136205.2	ENSMUSG00000041064.15	Pif1	chr9	protein_coding	PIF1 5'-to-3' DNA helicase
chr9	65494580	65494894	+	65494533	65494894	A5SS	0.5	50	50	ENSMUST00000131483.3	ENSMUSG00000041064.15	Pif1	chr9	protein_coding	PIF1 5'-to-3' DNA helicase
chr9	65557287	65558215	+	65557287;65557906	65557844;65558215	ES	0.5	50	50	ENSMUST00000169003.8	ENSMUSG00000032387.16	Rbpms2	chr9	protein_coding	RNA binding protein with multiple splicing 2
chr9	65558365	65558829	+	65558365	65558943	A3SS	0.5	50	50	ENSMUST00000169003.8	ENSMUSG00000032387.16	Rbpms2	chr9	protein_coding	RNA binding protein with multiple splicing 2
chr9	65538520	65556631	+	65538179	65556631	A5SS	0.33	50	50	ENSMUST00000169003.8	ENSMUSG00000032387.16	Rbpms2	chr9	protein_coding	RNA binding protein with multiple splicing 2
chr9	65538636	65556631	+	65538179	65556631	A5SS	0.33	50	50	ENSMUST00000169003.8	ENSMUSG00000032387.16	Rbpms2	chr9	protein_coding	RNA binding protein with multiple splicing 2
chr9	65538520	65556631	+	65538636	65556631	A5SS	0.33	50	50	ENSMUST00000213927.2	ENSMUSG00000032387.16	Rbpms2	chr9	protein_coding	RNA binding protein with multiple splicing 2
chr9	65595255	65595629	+	65595255	65596103	A3SS	0.5	50	50	ENSMUST00000128928.8	ENSMUSG00000040652.17	Oaz2	chr9	protein_coding	ornithine decarboxylase antizyme 2
chr9	65577130	65582446	+	65575459	65582446	A5SS	0.5	50	50	ENSMUST00000128928.8	ENSMUSG00000040652.17	Oaz2	chr9	protein_coding	ornithine decarboxylase antizyme 2
chr9	65584047	65593478	+	65582515	65593478	A5SS	0.5	50	50	ENSMUST00000128928.8	ENSMUSG00000040652.17	Oaz2	chr9	protein_coding	ornithine decarboxylase antizyme 2
chr9	65593550	65593555	+	65593553	65593555	A5SS	0.5	50	50	ENSMUST00000153700.9	ENSMUSG00000040652.17	Oaz2	chr9	protein_coding	ornithine decarboxylase antizyme 2
chr9	65607311	65608104	-	65604951	65608104	A3SS	0.5	50	50	ENSMUST00000159109.2	ENSMUSG00000040524.10	Zfp609	chr9	protein_coding	zinc finger protein 609
chr9	65702777	65704864	-	65702777	65734748	A5SS	0.5	50	50	ENSMUST00000159109.2	ENSMUSG00000040524.10	Zfp609	chr9	protein_coding	zinc finger protein 609
chr9	65804212	65815721	-	65804212;65805810	65805659;65815721	ES	0.25	50	50	ENSMUST00000179395.8	ENSMUSG00000032386.16	Trip4	chr9	protein_coding	thyroid hormone receptor interactor 4
chr9	65740730;65746319	65746217;65758649	-	65740730	65758649	cassetteExon	0.5	100	100	ENSMUST00000179395.8	ENSMUSG00000032386.16	Trip4	chr9	protein_coding	thyroid hormone receptor interactor 4
chr9	65792455	65815721	-	65805810	65815721	A3SS&ES	0.25	50	50	ENSMUST00000179395.8	ENSMUSG00000032386.16	Trip4	chr9	protein_coding	thyroid hormone receptor interactor 4
chr9	65802755	65803979	-	65792529	65803979	A3SS	0.5	50	50	ENSMUST00000179395.8	ENSMUSG00000032386.16	Trip4	chr9	protein_coding	thyroid hormone receptor interactor 4
chr9	65802755	65815721	-	65805810	65815721	A3SS&ES	0.25	50	50	ENSMUST00000179395.8	ENSMUSG00000032386.16	Trip4	chr9	protein_coding	thyroid hormone receptor interactor 4
chr9	65740730	65758649	-	65746319	65758649	3pMXE	0.5	50	50	ENSMUST00000132380.2	ENSMUSG00000032386.16	Trip4	chr9	protein_coding	thyroid hormone receptor interactor 4
chr9	65802755	65815721	-	65792455	65815721	A3SS	0.25	50	50	ENSMUST00000134338.8	ENSMUSG00000032386.16	Trip4	chr9	protein_coding	thyroid hormone receptor interactor 4
chr9	65804212	65815721	-	65792455	65815721	A3SS	0.25	50	50	ENSMUST00000134338.8	ENSMUSG00000032386.16	Trip4	chr9	protein_coding	thyroid hormone receptor interactor 4
chr9	65802755;65804212	65803979;65815721	-	65802755	65815721	cassetteExon	0.5	100	100	ENSMUST00000126517.8	ENSMUSG00000032386.16	Trip4	chr9	protein_coding	thyroid hormone receptor interactor 4
chr9	65804212	65815721	-	65805810	65815721	3pMXE	0.25	50	50	ENSMUST00000139346.2	ENSMUSG00000032386.16	Trip4	chr9	protein_coding	thyroid hormone receptor interactor 4
chr9	65866003	65888185	+	65866003;65880801	65880761;65888185	ES	0.5	50	50	ENSMUST00000205379.2	ENSMUSG00000032384.17	Csnk1g1	chr9	protein_coding	casein kinase 1, gamma 1
chr9	65880801	65906677	+	65880801;65888254	65888185;65906677	ES	0.5	50	50	ENSMUST00000205379.2	ENSMUSG00000032384.17	Csnk1g1	chr9	protein_coding	casein kinase 1, gamma 1
chr9	65939627	65951948	+	65939627	65946859	3pMXE	0.33	50	50	ENSMUST00000205379.2	ENSMUSG00000032384.17	Csnk1g1	chr9	protein_coding	casein kinase 1, gamma 1
chr9	65816450;65828350	65828286;65865611	+	65816450	65865611	cassetteExon	0.5	100	100	ENSMUST00000205379.2	ENSMUSG00000032384.17	Csnk1g1	chr9	protein_coding	casein kinase 1, gamma 1
chr9	65816450;65857346	65857298;65865611	+	65816450	65865611	cassetteExon	0.5	100	100	ENSMUST00000205379.2	ENSMUSG00000032384.17	Csnk1g1	chr9	protein_coding	casein kinase 1, gamma 1
chr9	65920136;65927194	65927084;65939521	+	65920136	65939521	cassetteExon	0.5	100	100	ENSMUST00000205379.2	ENSMUSG00000032384.17	Csnk1g1	chr9	protein_coding	casein kinase 1, gamma 1
chr9	65920136;65938138	65937907;65939521	+	65920136	65939521	cassetteExon	0.5	100	100	ENSMUST00000205379.2	ENSMUSG00000032384.17	Csnk1g1	chr9	protein_coding	casein kinase 1, gamma 1
chr9	65939627;65942355	65942332;65946859	+	65939627	65946859	cassetteExon	0.5	100	100	ENSMUST00000205379.2	ENSMUSG00000032384.17	Csnk1g1	chr9	protein_coding	casein kinase 1, gamma 1
chr9	65816944	65865611	+	65816450	65865611	A5SS	0.25	50	50	ENSMUST00000205379.2	ENSMUSG00000032384.17	Csnk1g1	chr9	protein_coding	casein kinase 1, gamma 1
chr9	65816450	65857298	+	65816450;65828350	65828286;65857298	ES	0.33	50	50	ENSMUST00000146069.8	ENSMUSG00000032384.17	Csnk1g1	chr9	protein_coding	casein kinase 1, gamma 1
chr9	65828350	65865611	+	65828350;65857346	65857298;65865611	ES	0.25	50	50	ENSMUST00000146069.8	ENSMUSG00000032384.17	Csnk1g1	chr9	protein_coding	casein kinase 1, gamma 1
chr9	65816944	65865611	+	65857346	65865611	A5SS&ES	0.25	50	50	ENSMUST00000146069.8	ENSMUSG00000032384.17	Csnk1g1	chr9	protein_coding	casein kinase 1, gamma 1
chr9	65831544	65857298	+	65828350	65857298	A5SS	0.33	50	50	ENSMUST00000146069.8	ENSMUSG00000032384.17	Csnk1g1	chr9	protein_coding	casein kinase 1, gamma 1
chr9	65920136;65938138	65937907;65939521	+	65920136;65927194	65927084;65939521	MXE	0.5	100	100	ENSMUST00000206048.2	ENSMUSG00000032384.17	Csnk1g1	chr9	protein_coding	casein kinase 1, gamma 1
chr9	65927194;65938138	65937907;65939521	+	65927194	65939521	cassetteExon	0.5	100	100	ENSMUST00000206048.2	ENSMUSG00000032384.17	Csnk1g1	chr9	protein_coding	casein kinase 1, gamma 1
chr9	65939627	65942332	+	65939627	65951948	A3SS	0.33	50	50	ENSMUST00000206048.2	ENSMUSG00000032384.17	Csnk1g1	chr9	protein_coding	casein kinase 1, gamma 1
chr9	65816450;65828350	65828286;65865611	+	65816450;65857346	65857298;65865611	MXE	0.5	100	100	ENSMUST00000034949.10	ENSMUSG00000032384.17	Csnk1g1	chr9	protein_coding	casein kinase 1, gamma 1
chr9	65831544	65857298	+	65816450	65857298	A5SS	0.33	50	50	ENSMUST00000034949.10	ENSMUSG00000032384.17	Csnk1g1	chr9	protein_coding	casein kinase 1, gamma 1
chr9	65866003;65880801	65880761;65906677	+	65866003;65888254	65888185;65906677	MXE	0.5	100	100	ENSMUST00000207167.2	ENSMUSG00000032384.17	Csnk1g1	chr9	protein_coding	casein kinase 1, gamma 1
chr9	65816944	65865611	+	65828350	65865611	A5SS&ES	0.25	50	50	ENSMUST00000154589.2	ENSMUSG00000032384.17	Csnk1g1	chr9	protein_coding	casein kinase 1, gamma 1
chr9	65866003	65888185	+	65866003	65880761	3pMXE	0.5	50	50	ENSMUST00000124688.8	ENSMUSG00000032384.17	Csnk1g1	chr9	protein_coding	casein kinase 1, gamma 1
chr9	65920136	65939521	+	65920136	65937907	3pMXE	0.33	50	50	ENSMUST00000130798.3	ENSMUSG00000032384.17	Csnk1g1	chr9	protein_coding	casein kinase 1, gamma 1
chr9	65920136;65927194	65927084;65937907	+	65920136	65937907	cassetteExon	0.5	100	100	ENSMUST00000130798.3	ENSMUSG00000032384.17	Csnk1g1	chr9	protein_coding	casein kinase 1, gamma 1
chr9	65927194	65939521	+	65927194	65937907	3pMXE	0.5	50	50	ENSMUST00000136773.3	ENSMUSG00000032384.17	Csnk1g1	chr9	protein_coding	casein kinase 1, gamma 1
chr9	65996471	65997869	-	65996471;65996890	65996810;65997869	ES	0.5	50	50	ENSMUST00000034946.15	ENSMUSG00000032382.15	Snx1	chr9	protein_coding	sorting nexin 1
chr9	66016910	66033725	-	66016910	66031889	5pMXE	0.5	50	50	ENSMUST00000034946.15	ENSMUSG00000032382.15	Snx1	chr9	protein_coding	sorting nexin 1
chr9	66139133;66149982	66149873;66153699	+	66139133	66153699	cassetteExon	0.5	100	100	ENSMUST00000034944.9	ENSMUSG00000032380.10	Dapk2	chr9	protein_coding	death-associated protein kinase 2
chr9	66162658	66163990	+	66162658	66175961	A3SS	0.5	50	50	ENSMUST00000034944.9	ENSMUSG00000032380.10	Dapk2	chr9	protein_coding	death-associated protein kinase 2
chr9	66369181	66370111	+	66369202	66370111	A5SS	0.5	50	50	ENSMUST00000042824.13	ENSMUSG00000038664.17	Herc1	chr9	protein_coding	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1
chr9	66447457	66451228	-	66447457;66449908	66449795;66451228	ES	0.33	50	50	ENSMUST00000127569.8	ENSMUSG00000032376.13	Usp3	chr9	protein_coding	ubiquitin specific peptidase 3
chr9	66455237	66474125	-	66455237;66469967	66469836;66474125	ES	0.5	50	50	ENSMUST00000127569.8	ENSMUSG00000032376.13	Usp3	chr9	protein_coding	ubiquitin specific peptidase 3
chr9	66449895	66451228	-	66449908	66451228	A3SS	0.33	50	50	ENSMUST00000127569.8	ENSMUSG00000032376.13	Usp3	chr9	protein_coding	ubiquitin specific peptidase 3
chr9	66474185	66483279	-	66474185	66500066	A5SS	0.5	50	50	ENSMUST00000127569.8	ENSMUSG00000032376.13	Usp3	chr9	protein_coding	ubiquitin specific peptidase 3
chr9	66447457	66451228	-	66447457;66449895	66449795;66451228	ES	0.33	50	50	ENSMUST00000139547.8	ENSMUSG00000032376.13	Usp3	chr9	protein_coding	ubiquitin specific peptidase 3
chr9	66455237;66474185	66474125;66500066	-	66455237	66500066	cassetteExon	0.5	100	100	ENSMUST00000139547.8	ENSMUSG00000032376.13	Usp3	chr9	protein_coding	ubiquitin specific peptidase 3
chr9	66455237	66469836	-	66455237	66500066	A5SS	0.33	50	50	ENSMUST00000139547.8	ENSMUSG00000032376.13	Usp3	chr9	protein_coding	ubiquitin specific peptidase 3
chr9	66661103	66670529	+	66661103;66669714	66669685;66670529	ES	0.5	50	50	ENSMUST00000071889.13	ENSMUSG00000032373.16	Car12	chr9	protein_coding	carbonic anhydrase 12
chr9	66658307	66659229	+	66658307	66659225	A3SS	0.5	50	50	ENSMUST00000071889.13	ENSMUSG00000032373.16	Car12	chr9	protein_coding	carbonic anhydrase 12
chr9	66659288	66659556	+	66659288	66659569	A3SS	0.5	50	50	ENSMUST00000071889.13	ENSMUSG00000032373.16	Car12	chr9	protein_coding	carbonic anhydrase 12
chr9	66691927	66697880	-	66691927;66697050	66696928;66697880	ES	0.5	50	50	ENSMUST00000034934.15	ENSMUSG00000032375.16	Aph1b	chr9	protein_coding	aph1 homolog B, gamma secretase subunit
chr9	66691927;66695733	66695481;66696928	-	66691927	66696928	cassetteExon	0.5	100	100	ENSMUST00000034934.15	ENSMUSG00000032375.16	Aph1b	chr9	protein_coding	aph1 homolog B, gamma secretase subunit
chr9	66691927	66695481	-	66691927	66697880	A5SS	0.33	50	50	ENSMUST00000113730.3	ENSMUSG00000032375.16	Aph1b	chr9	protein_coding	aph1 homolog B, gamma secretase subunit
chr9	66706348	66710516	-	66706348	66710005	5pMXE	0.33	50	50	ENSMUST00000168475.2	ENSMUSG00000092131.2	BC050972	chr9	lncRNA	cDNA sequence BC050972
chr9	66706348	66709656	-	66706348	66710005	A5SS	0.33	50	50	ENSMUST00000168475.2	ENSMUSG00000092131.2	BC050972	chr9	lncRNA	cDNA sequence BC050972
chr9	66706348	66710516	-	66706348	66709656	5pMXE	0.33	50	50	ENSMUST00000169420.2	ENSMUSG00000092131.2	BC050972	chr9	lncRNA	cDNA sequence BC050972
chr9	66740611	66741890	-	66740611	66741768	A5SS	0.5	50	50	ENSMUST00000169282.8	ENSMUSG00000053040.14	Aph1c	chr9	protein_coding	aph1 homolog C, gamma secretase subunit
chr9	66854979;66855999	66855921;66856611	+	66854979	66856611	cassetteExon	0.5	100	100	ENSMUST00000040917.14	ENSMUSG00000036781.14	Rps27l	chr9	protein_coding	ribosomal protein S27-like
chr9	66854979;66855999	66855923;66856611	+	66854979	66856611	cassetteExon	0.5	100	100	ENSMUST00000040917.14	ENSMUSG00000036781.14	Rps27l	chr9	protein_coding	ribosomal protein S27-like
chr9	66854979;66855999	66855925;66856611	+	66854979	66856611	cassetteExon	0.5	100	100	ENSMUST00000040917.14	ENSMUSG00000036781.14	Rps27l	chr9	protein_coding	ribosomal protein S27-like
chr9	66853794	66854113	+	66853462	66854113	A5SS	0.5	50	50	ENSMUST00000040917.14	ENSMUSG00000036781.14	Rps27l	chr9	protein_coding	ribosomal protein S27-like
chr9	66854979	66855923	+	66854979	66855921	A3SS	0.25	50	50	ENSMUST00000127896.8	ENSMUSG00000036781.14	Rps27l	chr9	protein_coding	ribosomal protein S27-like
chr9	66854979	66855925	+	66854979	66855921	A3SS	0.25	50	50	ENSMUST00000127896.8	ENSMUSG00000036781.14	Rps27l	chr9	protein_coding	ribosomal protein S27-like
chr9	66854979	66855925	+	66854979	66855923	A3SS	0.25	50	50	ENSMUST00000147394.8	ENSMUSG00000036781.14	Rps27l	chr9	protein_coding	ribosomal protein S27-like
chr9	66854979	66856611	+	66855999	66856611	5pMXE	0.5	50	50	ENSMUST00000123931.2	ENSMUSG00000036781.14	Rps27l	chr9	protein_coding	ribosomal protein S27-like
chr9	66863482;66875126	66874961;66877864	-	66863482	66877864	cassetteExon	0.5	100	100	ENSMUST00000215172.2	ENSMUSG00000032370.9	Lactb	chr9	protein_coding	lactamase, beta
chr9	66938796	66940076	-	66938796;66939823	66939748;66940076	ES	0.33	50	50	ENSMUST00000113696.8	ENSMUSG00000032366.16	Tpm1	chr9	protein_coding	tropomyosin 1, alpha
chr9	66940146	66943277	-	66940146;66941275	66941158;66943277	ES	0.5	50	50	ENSMUST00000113696.8	ENSMUSG00000032366.16	Tpm1	chr9	protein_coding	tropomyosin 1, alpha
chr9	66941275	66950860	-	66941275;66943410	66943277;66950860	ES	0.5	50	50	ENSMUST00000113696.8	ENSMUSG00000032366.16	Tpm1	chr9	protein_coding	tropomyosin 1, alpha
chr9	66943410	66955068	-	66943410	66950860	5pMXE	0.33	50	50	ENSMUST00000113696.8	ENSMUSG00000032366.16	Tpm1	chr9	protein_coding	tropomyosin 1, alpha
chr9	66943410	66955406	-	66943410	66950860	5pMXE	0.33	50	50	ENSMUST00000113696.8	ENSMUSG00000032366.16	Tpm1	chr9	protein_coding	tropomyosin 1, alpha
chr9	66938796;66939308	66939233;66940076	-	66938796;66939823	66939748;66940076	MXE	0.5	100	100	ENSMUST00000113696.8	ENSMUSG00000032366.16	Tpm1	chr9	protein_coding	tropomyosin 1, alpha
chr9	66931847	66938311	-	66930723	66938311	A3SS	0.25	50	50	ENSMUST00000113696.8	ENSMUSG00000032366.16	Tpm1	chr9	protein_coding	tropomyosin 1, alpha
chr9	66935449	66938311	-	66930723	66938311	A3SS	0.25	50	50	ENSMUST00000113696.8	ENSMUSG00000032366.16	Tpm1	chr9	protein_coding	tropomyosin 1, alpha
chr9	66937024	66938311	-	66930723	66938311	A3SS	0.25	50	50	ENSMUST00000113696.8	ENSMUSG00000032366.16	Tpm1	chr9	protein_coding	tropomyosin 1, alpha
chr9	66938796	66940076	-	66938796;66939308	66939233;66940076	ES	0.33	50	50	ENSMUST00000113705.8	ENSMUSG00000032366.16	Tpm1	chr9	protein_coding	tropomyosin 1, alpha
chr9	66943410;66955193	66955068;66955406	-	66943410	66955406	cassetteExon	0.5	100	100	ENSMUST00000113705.8	ENSMUSG00000032366.16	Tpm1	chr9	protein_coding	tropomyosin 1, alpha
chr9	66943410;66955193	66955068;66956301	-	66943410;66955531	66955406;66956301	MXE	0.5	100	100	ENSMUST00000113705.8	ENSMUSG00000032366.16	Tpm1	chr9	protein_coding	tropomyosin 1, alpha
chr9	66941275	66950860	-	66941275	66943277	A5SS&ES	0.5	50	50	ENSMUST00000113705.8	ENSMUSG00000032366.16	Tpm1	chr9	protein_coding	tropomyosin 1, alpha
chr9	66955193;66955531	66955406;66956301	-	66955193	66956301	cassetteExon	0.5	100	100	ENSMUST00000113707.9	ENSMUSG00000032366.16	Tpm1	chr9	protein_coding	tropomyosin 1, alpha
chr9	66935449	66938311	-	66931847	66938311	A3SS	0.25	50	50	ENSMUST00000113690.8	ENSMUSG00000032366.16	Tpm1	chr9	protein_coding	tropomyosin 1, alpha
chr9	66937024	66938311	-	66931847	66938311	A3SS	0.25	50	50	ENSMUST00000113690.8	ENSMUSG00000032366.16	Tpm1	chr9	protein_coding	tropomyosin 1, alpha
chr9	66940146;66943410	66943277;66950860	-	66940146;66941275	66941158;66950860	MXE	0.5	100	100	ENSMUST00000139046.8	ENSMUSG00000032366.16	Tpm1	chr9	protein_coding	tropomyosin 1, alpha
chr9	66935449	66938311	-	66935449;66937024	66936946;66938311	ES	0.5	50	50	ENSMUST00000113685.10	ENSMUSG00000032366.16	Tpm1	chr9	protein_coding	tropomyosin 1, alpha
chr9	66935449	66938311	-	66937024	66938311	3pMXE	0.25	50	50	ENSMUST00000030185.5	ENSMUSG00000032366.16	Tpm1	chr9	protein_coding	tropomyosin 1, alpha
chr9	66940146	66943277	-	66941275	66943277	3pMXE	0.5	50	50	ENSMUST00000131279.2	ENSMUSG00000032366.16	Tpm1	chr9	protein_coding	tropomyosin 1, alpha
chr9	67064462	67069911	+	67064462	67121008	A3SS	0.5	50	50	ENSMUST00000215645.2	ENSMUSG00000111556.2	Gm19299	chr9	lncRNA	predicted gene, 19299
chr9	67154884	67157825	-	67149714	67157825	A3SS	0.5	50	50	ENSMUST00000040025.14	ENSMUSG00000052698.16	Tln2	chr9	protein_coding	talin 2
chr9	67131383	67134345	-	67131383	67134390	A5SS	0.5	50	50	ENSMUST00000040025.14	ENSMUSG00000052698.16	Tln2	chr9	protein_coding	talin 2
chr9	67230463	67232067	-	67230463	67237830	A5SS	0.5	50	50	ENSMUST00000040025.14	ENSMUSG00000052698.16	Tln2	chr9	protein_coding	talin 2
chr9	67304965	67311534	-	67304965	67367198	A5SS	0.5	50	50	ENSMUST00000040025.14	ENSMUSG00000052698.16	Tln2	chr9	protein_coding	talin 2
chr9	67367271	67446614	-	67367271	67466896	A5SS	0.5	50	50	ENSMUST00000040025.14	ENSMUSG00000052698.16	Tln2	chr9	protein_coding	talin 2
chr9	67180011	67182603	-	67170262	67182603	A3SS	0.5	50	50	ENSMUST00000214859.2	ENSMUSG00000052698.16	Tln2	chr9	protein_coding	talin 2
chr9	67170262	67174059	-	67170262	67182603	A5SS	0.5	50	50	ENSMUST00000214859.2	ENSMUSG00000052698.16	Tln2	chr9	protein_coding	talin 2
chr9	67804479	67808727	+	67804479;67806032	67805915;67808727	ES	0.5	50	50	ENSMUST00000077879.7	ENSMUSG00000035284.11	Vps13c	chr9	protein_coding	vacuolar protein sorting 13C
chr9	67889901;67890688	67890605;67895245	+	67889901	67895245	cassetteExon	0.5	100	100	ENSMUST00000077879.7	ENSMUSG00000035284.11	Vps13c	chr9	protein_coding	vacuolar protein sorting 13C
chr9	67889901	67895245	+	67889901	67890605	3pMXE	0.5	50	50	ENSMUST00000213168.2	ENSMUSG00000035284.11	Vps13c	chr9	protein_coding	vacuolar protein sorting 13C
chr9	68562644	68570627	+	68561254	68570627	A5SS	0.5	50	50	ENSMUST00000140351.8	ENSMUSG00000032238.18	Rora	chr9	protein_coding	RAR-related orphan receptor alpha
chr9	69103386;69104871	69104790;69255414	+	69103386	69255414	cassetteExon	0.5	100	100	ENSMUST00000034766.14	ENSMUSG00000032238.18	Rora	chr9	protein_coding	RAR-related orphan receptor alpha
chr9	68561254	68570627	+	68561254	69103357	A3SS	0.5	50	50	ENSMUST00000034766.14	ENSMUSG00000032238.18	Rora	chr9	protein_coding	RAR-related orphan receptor alpha
chr9	69102930	69103357	+	68561254	69103357	A5SS	0.5	50	50	ENSMUST00000034766.14	ENSMUSG00000032238.18	Rora	chr9	protein_coding	RAR-related orphan receptor alpha
chr9	69197330	69255414	+	69103386	69255414	A5SS	0.33	50	50	ENSMUST00000034766.14	ENSMUSG00000032238.18	Rora	chr9	protein_coding	RAR-related orphan receptor alpha
chr9	69104871	69157776	+	69104871	69255414	A3SS	0.5	50	50	ENSMUST00000174296.2	ENSMUSG00000032238.18	Rora	chr9	protein_coding	RAR-related orphan receptor alpha
chr9	69197330	69255414	+	69104871	69255414	A5SS	0.33	50	50	ENSMUST00000174296.2	ENSMUSG00000032238.18	Rora	chr9	protein_coding	RAR-related orphan receptor alpha
chr9	69305335	69307759	+	69305335;69306369	69306228;69307759	ES	0.5	50	50	ENSMUST00000034761.15	ENSMUSG00000032235.16	Ice2	chr9	protein_coding	interactor of little elongation complex ELL subunit 2
chr9	69306369	69314399	+	69306369;69307863	69307759;69314399	ES	0.5	50	50	ENSMUST00000034761.15	ENSMUSG00000032235.16	Ice2	chr9	protein_coding	interactor of little elongation complex ELL subunit 2
chr9	69307863	69314547	+	69307863	69314399	A3SS	0.33	50	50	ENSMUST00000034761.15	ENSMUSG00000032235.16	Ice2	chr9	protein_coding	interactor of little elongation complex ELL subunit 2
chr9	69324094	69324216	+	69323643	69324216	A5SS	0.5	50	50	ENSMUST00000034761.15	ENSMUSG00000032235.16	Ice2	chr9	protein_coding	interactor of little elongation complex ELL subunit 2
chr9	69306369	69314399	+	69306369	69307759	A3SS&ES	0.5	50	50	ENSMUST00000142743.8	ENSMUSG00000032235.16	Ice2	chr9	protein_coding	interactor of little elongation complex ELL subunit 2
chr9	69307863	69317394	+	69307863	69314399	3pMXE	0.33	50	50	ENSMUST00000125938.2	ENSMUSG00000032235.16	Ice2	chr9	protein_coding	interactor of little elongation complex ELL subunit 2
chr9	69305335;69306369	69306228;69314399	+	69305335;69307863	69307759;69314399	MXE	0.5	100	100	ENSMUST00000125938.2	ENSMUSG00000032235.16	Ice2	chr9	protein_coding	interactor of little elongation complex ELL subunit 2
chr9	69307863	69317394	+	69307863	69314547	3pMXE	0.33	50	50	ENSMUST00000117610.8	ENSMUSG00000032235.16	Ice2	chr9	protein_coding	interactor of little elongation complex ELL subunit 2
chr9	69315661	69317394	+	69307863	69317394	A5SS	0.5	50	50	ENSMUST00000131233.2	ENSMUSG00000032235.16	Ice2	chr9	protein_coding	interactor of little elongation complex ELL subunit 2
chr9	69305335	69307759	+	69306369	69307759	5pMXE	0.5	50	50	ENSMUST00000151667.2	ENSMUSG00000032235.16	Ice2	chr9	protein_coding	interactor of little elongation complex ELL subunit 2
chr9	69361021;69361492	69361444;69371742	+	69361021	69371742	cassetteExon	0.5	100	100	ENSMUST00000034756.15	ENSMUSG00000032231.15	Anxa2	chr9	protein_coding	annexin A2
chr9	69361443	69371742	+	69361021	69371742	A5SS	0.33	50	50	ENSMUST00000034756.15	ENSMUSG00000032231.15	Anxa2	chr9	protein_coding	annexin A2
chr9	69387548	69390256	+	69387073	69390256	A5SS	0.5	50	50	ENSMUST00000034756.15	ENSMUSG00000032231.15	Anxa2	chr9	protein_coding	annexin A2
chr9	69361492	69371742	+	69361443	69371742	A5SS	0.33	50	50	ENSMUST00000134907.8	ENSMUSG00000032231.15	Anxa2	chr9	protein_coding	annexin A2
chr9	69730992	69736963	+	69730992;69736556	69736325;69736963	ES	0.5	50	50	ENSMUST00000180488.8	ENSMUSG00000097623.8	B230323A14Rik	chr9	lncRNA	RIKEN cDNA B230323A14 gene
chr9	69668494	69714069	+	69666439	69714069	A5SS	0.5	50	50	ENSMUST00000180488.8	ENSMUSG00000097623.8	B230323A14Rik	chr9	lncRNA	RIKEN cDNA B230323A14 gene
chr9	69910949	69914346	+	69910949;69911623	69911588;69914346	ES	0.5	50	50	ENSMUST00000034754.12	ENSMUSG00000011958.18	Bnip2	chr9	protein_coding	BCL2/adenovirus E1B interacting protein 2
chr9	69904539;69905588	69905530;69906376	+	69904539	69906376	cassetteExon	0.5	100	100	ENSMUST00000034754.12	ENSMUSG00000011958.18	Bnip2	chr9	protein_coding	BCL2/adenovirus E1B interacting protein 2
chr9	69904539;69905615	69905530;69906376	+	69904539	69906376	cassetteExon	0.5	100	100	ENSMUST00000034754.12	ENSMUSG00000011958.18	Bnip2	chr9	protein_coding	BCL2/adenovirus E1B interacting protein 2
chr9	69905588	69906376	+	69905615	69906376	A5SS	0.33	50	50	ENSMUST00000154772.8	ENSMUSG00000011958.18	Bnip2	chr9	protein_coding	BCL2/adenovirus E1B interacting protein 2
chr9	69904539	69906376	+	69905588	69906376	5pMXE	0.33	50	50	ENSMUST00000133307.2	ENSMUSG00000011958.18	Bnip2	chr9	protein_coding	BCL2/adenovirus E1B interacting protein 2
chr9	69910949	69914346	+	69910949	69911588	3pMXE	0.5	50	50	ENSMUST00000137472.2	ENSMUSG00000011958.18	Bnip2	chr9	protein_coding	BCL2/adenovirus E1B interacting protein 2
chr9	69924205	69929719	+	69924205;69926797	69926671;69929719	ES	0.5	50	50	ENSMUST00000118198.8	ENSMUSG00000033543.18	Gtf2a2	chr9	protein_coding	general transcription factor II A, 2
chr9	69919943;69921773	69921575;69922574	+	69919943	69922574	cassetteExon	0.5	100	100	ENSMUST00000118198.8	ENSMUSG00000033543.18	Gtf2a2	chr9	protein_coding	general transcription factor II A, 2
chr9	69919943;69922297	69922205;69922574	+	69919943	69922574	cassetteExon	0.5	100	100	ENSMUST00000118198.8	ENSMUSG00000033543.18	Gtf2a2	chr9	protein_coding	general transcription factor II A, 2
chr9	69922692;69923219	69923050;69924101	+	69922692	69924101	cassetteExon	0.5	100	100	ENSMUST00000118198.8	ENSMUSG00000033543.18	Gtf2a2	chr9	protein_coding	general transcription factor II A, 2
chr9	69924205;69924473	69924355;69926671	+	69924205	69926671	cassetteExon	0.5	100	100	ENSMUST00000118198.8	ENSMUSG00000033543.18	Gtf2a2	chr9	protein_coding	general transcription factor II A, 2
chr9	69924205;69926100	69925962;69926671	+	69924205	69926671	cassetteExon	0.5	100	100	ENSMUST00000118198.8	ENSMUSG00000033543.18	Gtf2a2	chr9	protein_coding	general transcription factor II A, 2
chr9	69920234	69922574	+	69919943	69922574	A5SS	0.25	50	50	ENSMUST00000118198.8	ENSMUSG00000033543.18	Gtf2a2	chr9	protein_coding	general transcription factor II A, 2
chr9	69924473;69926100	69925962;69926671	+	69924473	69926671	cassetteExon	0.5	100	100	ENSMUST00000131078.8	ENSMUSG00000033543.18	Gtf2a2	chr9	protein_coding	general transcription factor II A, 2
chr9	69924205	69926671	+	69924473	69926671	A5SS	0.33	50	50	ENSMUST00000131078.8	ENSMUSG00000033543.18	Gtf2a2	chr9	protein_coding	general transcription factor II A, 2
chr9	69924205	69929719	+	69926797	69929719	A5SS&ES	0.5	50	50	ENSMUST00000131078.8	ENSMUSG00000033543.18	Gtf2a2	chr9	protein_coding	general transcription factor II A, 2
chr9	69924205	69924355	+	69924205	69929719	A3SS	0.25	50	50	ENSMUST00000119905.8	ENSMUSG00000033543.18	Gtf2a2	chr9	protein_coding	general transcription factor II A, 2
chr9	69924205	69925962	+	69924205	69929719	A3SS	0.25	50	50	ENSMUST00000119905.8	ENSMUSG00000033543.18	Gtf2a2	chr9	protein_coding	general transcription factor II A, 2
chr9	69924205;69924473	69924355;69925962	+	69924205	69925962	cassetteExon	0.5	100	100	ENSMUST00000116552.8	ENSMUSG00000033543.18	Gtf2a2	chr9	protein_coding	general transcription factor II A, 2
chr9	69924205;69924473	69924355;69926671	+	69924205;69926100	69925962;69926671	MXE	0.5	100	100	ENSMUST00000116552.8	ENSMUSG00000033543.18	Gtf2a2	chr9	protein_coding	general transcription factor II A, 2
chr9	69921773	69922574	+	69920234	69922574	A5SS	0.25	50	50	ENSMUST00000119413.8	ENSMUSG00000033543.18	Gtf2a2	chr9	protein_coding	general transcription factor II A, 2
chr9	69922297	69922574	+	69920234	69922574	A5SS	0.25	50	50	ENSMUST00000119413.8	ENSMUSG00000033543.18	Gtf2a2	chr9	protein_coding	general transcription factor II A, 2
chr9	69924205	69929719	+	69924205	69926671	3pMXE	0.25	50	50	ENSMUST00000140305.8	ENSMUSG00000033543.18	Gtf2a2	chr9	protein_coding	general transcription factor II A, 2
chr9	69919943;69921773	69921575;69922574	+	69919943;69922297	69922205;69922574	MXE	0.5	100	100	ENSMUST00000140305.8	ENSMUSG00000033543.18	Gtf2a2	chr9	protein_coding	general transcription factor II A, 2
chr9	69924205	69925962	+	69924473	69925962	A5SS	0.5	50	50	ENSMUST00000145816.2	ENSMUSG00000033543.18	Gtf2a2	chr9	protein_coding	general transcription factor II A, 2
chr9	69924205	69926671	+	69926100	69926671	A5SS&ES	0.33	50	50	ENSMUST00000145816.2	ENSMUSG00000033543.18	Gtf2a2	chr9	protein_coding	general transcription factor II A, 2
chr9	69922692	69924101	+	69923219	69924101	5pMXE	0.5	50	50	ENSMUST00000148239.8	ENSMUSG00000033543.18	Gtf2a2	chr9	protein_coding	general transcription factor II A, 2
chr9	70033565	70048938	-	70033565	70048595	5pMXE	0.33	50	50	ENSMUST00000034749.16	ENSMUSG00000032224.16	Fam81a	chr9	protein_coding	family with sequence similarity 81, member A
chr9	70033565	70049529	-	70033565	70048595	5pMXE	0.33	50	50	ENSMUST00000034749.16	ENSMUSG00000032224.16	Fam81a	chr9	protein_coding	family with sequence similarity 81, member A
chr9	70009936	70010102	-	70006476	70010102	A3SS	0.5	50	50	ENSMUST00000034749.16	ENSMUSG00000032224.16	Fam81a	chr9	protein_coding	family with sequence similarity 81, member A
chr9	70033565	70049529	-	70033565	70048938	5pMXE	0.33	50	50	ENSMUST00000123206.8	ENSMUSG00000032224.16	Fam81a	chr9	protein_coding	family with sequence similarity 81, member A
chr9	70209069;70211909	70211842;70223874	+	70209069	70223874	cassetteExon	0.5	100	100	ENSMUST00000214767.2	ENSMUSG00000032220.11	Myo1e	chr9	protein_coding	myosin IE
chr9	70336961	70338213	-	70336937	70338213	A3SS	0.5	50	50	ENSMUST00000213208.2	ENSMUSG00000032217.14	Rnf111	chr9	protein_coding	ring finger 111
chr9	70357820	70360783	-	70357823	70360783	A3SS	0.5	50	50	ENSMUST00000213208.2	ENSMUSG00000032217.14	Rnf111	chr9	protein_coding	ring finger 111
chr9	70410284	70410741	-	70410284	70410514	5pMXE	0.5	50	50	ENSMUST00000215848.2	ENSMUSG00000032217.14	Rnf111	chr9	protein_coding	ring finger 111
chr9	70383950	70410741	-	70383950;70410284	70410222;70410741	ES	0.5	50	50	ENSMUST00000034739.12	ENSMUSG00000032217.14	Rnf111	chr9	protein_coding	ring finger 111
chr9	70383950	70410741	-	70383950	70410222	5pMXE	0.5	50	50	ENSMUST00000213647.2	ENSMUSG00000032217.14	Rnf111	chr9	protein_coding	ring finger 111
chr9	70450363	70466319	+	70450363;70451339	70451252;70466319	ES	0.5	50	50	ENSMUST00000216816.2	ENSMUSG00000032212.11	Sltm	chr9	protein_coding	SAFB-like, transcription modulator
chr9	70488746	70492035	+	70488746;70491394	70491214;70492035	ES	0.5	50	50	ENSMUST00000216816.2	ENSMUSG00000032212.11	Sltm	chr9	protein_coding	SAFB-like, transcription modulator
chr9	70479458	70480739	+	70479458	70480793	A3SS	0.5	50	50	ENSMUST00000216816.2	ENSMUSG00000032212.11	Sltm	chr9	protein_coding	SAFB-like, transcription modulator
chr9	70487337	70487414	+	70487337	70487449	A3SS	0.5	50	50	ENSMUST00000216816.2	ENSMUSG00000032212.11	Sltm	chr9	protein_coding	SAFB-like, transcription modulator
chr9	70450363	70466319	+	70450363	70451252	3pMXE	0.5	50	50	ENSMUST00000215714.2	ENSMUSG00000032212.11	Sltm	chr9	protein_coding	SAFB-like, transcription modulator
chr9	70466383	70469058	+	70466383	70479431	A3SS	0.5	50	50	ENSMUST00000213808.2	ENSMUSG00000032212.11	Sltm	chr9	protein_coding	SAFB-like, transcription modulator
chr9	70470143	70479431	+	70466383	70479431	A5SS	0.5	50	50	ENSMUST00000213808.2	ENSMUSG00000032212.11	Sltm	chr9	protein_coding	SAFB-like, transcription modulator
chr9	70512568	70514740	-	70512571	70514740	A3SS	0.5	50	50	ENSMUST00000049031.6	ENSMUSG00000042444.11	Mindy2	chr9	protein_coding	MINDY lysine 48 deubiquitinase 2
chr9	70673384	70674154	+	70673384	70674180	A3SS	0.5	50	50	ENSMUST00000140205.8	ENSMUSG00000054693.15	Adam10	chr9	protein_coding	a disintegrin and metallopeptidase domain 10
chr9	70586541	70610569	+	70586541	70647357	A3SS	0.5	50	50	ENSMUST00000144537.2	ENSMUSG00000054693.15	Adam10	chr9	protein_coding	a disintegrin and metallopeptidase domain 10
chr9	70630053	70647357	+	70586541	70647357	A5SS	0.5	50	50	ENSMUST00000144537.2	ENSMUSG00000054693.15	Adam10	chr9	protein_coding	a disintegrin and metallopeptidase domain 10
chr9	70730845	70859326	-	70730845	70841758	5pMXE	0.5	50	50	ENSMUST00000034731.10	ENSMUSG00000032207.11	Lipc	chr9	protein_coding	lipase, hepatic
chr9	70728180	70730655	-	70727824	70730655	A3SS	0.5	50	50	ENSMUST00000034731.10	ENSMUSG00000032207.11	Lipc	chr9	protein_coding	lipase, hepatic
chr9	70730845;70841890	70841758;70859326	-	70730845	70859326	cassetteExon	0.5	100	100	ENSMUST00000216798.2	ENSMUSG00000032207.11	Lipc	chr9	protein_coding	lipase, hepatic
chr9	71030290;71034112	71033963;71037703	-	71030290	71037703	cassetteExon	0.5	100	100	ENSMUST00000074465.9	ENSMUSG00000032204.14	Aqp9	chr9	protein_coding	aquaporin 9
chr9	71045496	71069599	-	71045496	71070255	A5SS	0.5	50	50	ENSMUST00000074465.9	ENSMUSG00000032204.14	Aqp9	chr9	protein_coding	aquaporin 9
chr9	71070428	71071823	-	71070428;71070872	71070694;71071823	ES	0.5	50	50	ENSMUST00000113570.8	ENSMUSG00000032204.14	Aqp9	chr9	protein_coding	aquaporin 9
chr9	71071930	71074766	-	71071864	71074766	A3SS	0.25	50	50	ENSMUST00000113570.8	ENSMUSG00000032204.14	Aqp9	chr9	protein_coding	aquaporin 9
chr9	71071935	71074766	-	71071864	71074766	A3SS	0.25	50	50	ENSMUST00000113570.8	ENSMUSG00000032204.14	Aqp9	chr9	protein_coding	aquaporin 9
chr9	71072524	71074766	-	71071864	71074766	A3SS	0.25	50	50	ENSMUST00000113570.8	ENSMUSG00000032204.14	Aqp9	chr9	protein_coding	aquaporin 9
chr9	71071935	71074766	-	71071935	71074788	A5SS	0.5	50	50	ENSMUST00000139495.8	ENSMUSG00000032204.14	Aqp9	chr9	protein_coding	aquaporin 9
chr9	71070428	71071823	-	71070872	71071823	3pMXE	0.5	50	50	ENSMUST00000133239.8	ENSMUSG00000032204.14	Aqp9	chr9	protein_coding	aquaporin 9
chr9	71071930	71074766	-	71071935	71074766	A3SS	0.25	50	50	ENSMUST00000133239.8	ENSMUSG00000032204.14	Aqp9	chr9	protein_coding	aquaporin 9
chr9	71072524	71074766	-	71071935	71074766	A3SS	0.25	50	50	ENSMUST00000133239.8	ENSMUSG00000032204.14	Aqp9	chr9	protein_coding	aquaporin 9
chr9	71072524	71074766	-	71071930	71074766	A3SS	0.25	50	50	ENSMUST00000153050.8	ENSMUSG00000032204.14	Aqp9	chr9	protein_coding	aquaporin 9
chr9	71083925	71085463	+	71083925	71114665	A3SS	0.5	50	50	ENSMUST00000214960.2	ENSMUSG00000111429.2	Gm32511	chr9	lncRNA	predicted gene, 32511
chr9	71080008	71083827	+	71071107	71083827	A5SS	0.5	50	50	ENSMUST00000214960.2	ENSMUSG00000111429.2	Gm32511	chr9	lncRNA	predicted gene, 32511
chr9	71086310	71114665	+	71083925	71114665	A5SS	0.5	50	50	ENSMUST00000214960.2	ENSMUSG00000111429.2	Gm32511	chr9	lncRNA	predicted gene, 32511
chr9	71390866	71392966	-	71391087	71392966	A3SS	0.5	50	50	ENSMUST00000034720.12	ENSMUSG00000032199.14	Polr2m	chr9	protein_coding	polymerase (RNA) II (DNA directed) polypeptide M
chr9	71391087	71392017	-	71391087	71392966	A5SS	0.5	50	50	ENSMUST00000034720.12	ENSMUSG00000032199.14	Polr2m	chr9	protein_coding	polymerase (RNA) II (DNA directed) polypeptide M
chr9	71422451	71453951	-	71422451;71432147	71432064;71453951	ES	0.5	50	50	ENSMUST00000163708.2	ENSMUSG00000041361.14	Myzap	chr9	protein_coding	myocardial zonula adherens protein
chr9	71486979;71493498	71493454;71499472	-	71486979	71499472	cassetteExon	0.5	100	100	ENSMUST00000163708.2	ENSMUSG00000041361.14	Myzap	chr9	protein_coding	myocardial zonula adherens protein
chr9	71486979	71487081	-	71486979	71499472	A5SS	0.33	50	50	ENSMUST00000163708.2	ENSMUSG00000041361.14	Myzap	chr9	protein_coding	myocardial zonula adherens protein
chr9	71486979	71493454	-	71486979	71487081	5pMXE	0.33	50	50	ENSMUST00000171977.8	ENSMUSG00000041361.14	Myzap	chr9	protein_coding	myocardial zonula adherens protein
chr9	71563534;71612642	71612430;71622605	-	71563534	71622605	cassetteExon	0.5	100	100	ENSMUST00000121322.8	ENSMUSG00000032232.15	Cgnl1	chr9	protein_coding	cingulin-like 1
chr9	71552935	71555518	-	71552935	71557504	A5SS	0.5	50	50	ENSMUST00000121322.8	ENSMUSG00000032232.15	Cgnl1	chr9	protein_coding	cingulin-like 1
chr9	71633364	71678314	-	71633364	71678791	A5SS	0.5	50	50	ENSMUST00000121322.8	ENSMUSG00000032232.15	Cgnl1	chr9	protein_coding	cingulin-like 1
chr9	71775560	71777356	-	71775560;71776352	71776281;71777356	ES	0.5	50	50	ENSMUST00000183404.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71830069	71907698	-	71830069;71851300	71851236;71907698	ES	0.5	50	50	ENSMUST00000183404.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71907800	72016958	-	71907800;71922993	71922920;72016958	ES	0.2	50	50	ENSMUST00000183404.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71830069;71841942	71841835;71851236	-	71830069	71851236	cassetteExon	0.5	100	100	ENSMUST00000183404.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71907800;71914044	71913983;71922920	-	71907800	71922920	cassetteExon	0.5	100	100	ENSMUST00000183404.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71907800;71914044	71913983;72016958	-	71907800;71922993	71922920;72016958	MXE	0.5	100	100	ENSMUST00000183404.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	72018106	72018858	-	72018116	72018858	A3SS	0.5	50	50	ENSMUST00000183404.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71791077	71791692	-	71791077	71792465	A5SS	0.5	50	50	ENSMUST00000183404.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71792570	71796950	-	71792570	71824287	A5SS	0.2	50	50	ENSMUST00000183404.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71792570	71803212	-	71792570	71824287	A5SS	0.2	50	50	ENSMUST00000183404.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	72018116	72018297	-	72018116	72018858	A5SS	0.5	50	50	ENSMUST00000183404.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71792570	71922920	-	71792570	71803212	5pMXE	0.2	50	50	ENSMUST00000184770.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71792570	72016958	-	71792570	71803212	5pMXE	0.2	50	50	ENSMUST00000184770.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71792570;71797055	71796950;71803212	-	71792570	71803212	cassetteExon	0.5	100	100	ENSMUST00000184770.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71792570;71922993	71922920;72016958	-	71792570	72016958	cassetteExon	0.5	100	100	ENSMUST00000184867.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71851300	72016958	-	71792570	72016958	A3SS	0.2	50	50	ENSMUST00000184867.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71907800	72016958	-	71792570	72016958	A3SS	0.2	50	50	ENSMUST00000184867.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71914044	72016958	-	71792570	72016958	A3SS	0.2	50	50	ENSMUST00000184867.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71792570	71796950	-	71792570	72016958	A5SS	0.2	50	50	ENSMUST00000184867.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71792570	71824287	-	71792570	72016958	A5SS	0.2	50	50	ENSMUST00000184867.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71907800	72016958	-	71907800;71914044	71913983;72016958	ES	0.2	50	50	ENSMUST00000184523.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71792570;71922993	71922920;72016958	-	71792570;71914044	71824287;72016958	MXE	0.5	100	100	ENSMUST00000184523.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71914044;71922993	71922920;72016958	-	71914044	72016958	cassetteExon	0.5	100	100	ENSMUST00000184523.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71830069;71907800	71907698;72016958	-	71830069;71851300	71851236;72016958	MXE	0.5	100	100	ENSMUST00000184072.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71851300;71907800	71907698;72016958	-	71851300	72016958	cassetteExon	0.5	100	100	ENSMUST00000184072.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71792570;71922993	71922920;72016958	-	71792570;71851300	71824287;72016958	MXE	0.5	100	100	ENSMUST00000184072.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71914044	72016958	-	71851300	72016958	A3SS	0.2	50	50	ENSMUST00000184072.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71830069	71841835	-	71830069	71907698	A5SS	0.33	50	50	ENSMUST00000184416.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71851300	72016958	-	71851300	71907698	5pMXE	0.5	50	50	ENSMUST00000183647.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71851300	72016958	-	71922993	72016958	A3SS&ES	0.2	50	50	ENSMUST00000183492.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71907800	71922920	-	71792570	71922920	A3SS	0.33	50	50	ENSMUST00000183492.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71907800	72016958	-	71922993	72016958	A3SS&ES	0.2	50	50	ENSMUST00000183492.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71914044	71922920	-	71792570	71922920	A3SS	0.33	50	50	ENSMUST00000183492.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71914044	72016958	-	71922993	72016958	A3SS&ES	0.2	50	50	ENSMUST00000183492.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71792570	71796950	-	71792570	71922920	A5SS	0.2	50	50	ENSMUST00000183492.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71792570	71824287	-	71792570	71922920	A5SS	0.2	50	50	ENSMUST00000183492.8	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71792570;71922993	71922920;72016958	-	71792570;71907800	71824287;72016958	MXE	0.5	100	100	ENSMUST00000183594.2	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	71830069	71907698	-	71851300	71907698	3pMXE	0.5	50	50	ENSMUST00000184196.2	ENSMUSG00000032228.17	Tcf12	chr9	protein_coding	transcription factor 12
chr9	72209048	72215233	+	72209048;72209288	72209149;72215233	ES	0.33	50	50	ENSMUST00000184036.8	ENSMUSG00000038535.18	Zfp280d	chr9	protein_coding	zinc finger protein 280D
chr9	72246330	72267568	+	72246330;72258852	72258807;72267568	ES	0.25	50	50	ENSMUST00000184036.8	ENSMUSG00000038535.18	Zfp280d	chr9	protein_coding	zinc finger protein 280D
chr9	72202604;72203317	72203257;72205984	+	72202604	72205984	cassetteExon	0.5	100	100	ENSMUST00000184036.8	ENSMUSG00000038535.18	Zfp280d	chr9	protein_coding	zinc finger protein 280D
chr9	72209288;72210609	72210527;72215233	+	72209288	72215233	cassetteExon	0.5	100	100	ENSMUST00000184036.8	ENSMUSG00000038535.18	Zfp280d	chr9	protein_coding	zinc finger protein 280D
chr9	72215350;72216688	72216534;72219360	+	72215350	72219360	cassetteExon	0.5	100	100	ENSMUST00000184036.8	ENSMUSG00000038535.18	Zfp280d	chr9	protein_coding	zinc finger protein 280D
chr9	72220042;72226123	72226006;72226374	+	72220042	72226374	cassetteExon	0.5	100	100	ENSMUST00000184036.8	ENSMUSG00000038535.18	Zfp280d	chr9	protein_coding	zinc finger protein 280D
chr9	72236444;72237235	72236792;72238148	+	72236444	72238148	cassetteExon	0.5	100	100	ENSMUST00000184036.8	ENSMUSG00000038535.18	Zfp280d	chr9	protein_coding	zinc finger protein 280D
chr9	72258852;72266862	72266804;72267568	+	72258852	72267568	cassetteExon	0.5	100	100	ENSMUST00000184036.8	ENSMUSG00000038535.18	Zfp280d	chr9	protein_coding	zinc finger protein 280D
chr9	72182311	72188366	+	72182311	72202561	A3SS	0.33	50	50	ENSMUST00000184036.8	ENSMUSG00000038535.18	Zfp280d	chr9	protein_coding	zinc finger protein 280D
chr9	72182311	72193069	+	72182311	72202561	A3SS	0.33	50	50	ENSMUST00000184036.8	ENSMUSG00000038535.18	Zfp280d	chr9	protein_coding	zinc finger protein 280D
chr9	72220042	72220807	+	72220042	72226374	A3SS	0.33	50	50	ENSMUST00000184036.8	ENSMUSG00000038535.18	Zfp280d	chr9	protein_coding	zinc finger protein 280D
chr9	72246330	72246898	+	72246330	72258807	A3SS	0.33	50	50	ENSMUST00000184036.8	ENSMUSG00000038535.18	Zfp280d	chr9	protein_coding	zinc finger protein 280D
chr9	72258852	72267575	+	72258852	72267568	A3SS	0.33	50	50	ENSMUST00000184036.8	ENSMUSG00000038535.18	Zfp280d	chr9	protein_coding	zinc finger protein 280D
chr9	72247621	72267568	+	72258852	72267568	A5SS&ES	0.25	50	50	ENSMUST00000184036.8	ENSMUSG00000038535.18	Zfp280d	chr9	protein_coding	zinc finger protein 280D
chr9	72246330	72267568	+	72246330	72246898	3pMXE	0.33	50	50	ENSMUST00000184517.8	ENSMUSG00000038535.18	Zfp280d	chr9	protein_coding	zinc finger protein 280D
chr9	72210609	72215233	+	72209048	72215233	A5SS	0.33	50	50	ENSMUST00000184399.8	ENSMUSG00000038535.18	Zfp280d	chr9	protein_coding	zinc finger protein 280D
chr9	72247621	72267568	+	72246330	72267568	A5SS	0.25	50	50	ENSMUST00000184399.8	ENSMUSG00000038535.18	Zfp280d	chr9	protein_coding	zinc finger protein 280D
chr9	72266862	72267568	+	72246330	72267568	A5SS	0.25	50	50	ENSMUST00000184399.8	ENSMUSG00000038535.18	Zfp280d	chr9	protein_coding	zinc finger protein 280D
chr9	72182311;72188446	72188366;72193069	+	72182311	72193069	cassetteExon	0.5	100	100	ENSMUST00000184968.2	ENSMUSG00000038535.18	Zfp280d	chr9	protein_coding	zinc finger protein 280D
chr9	72246330	72267568	+	72246330;72247621	72246898;72267568	ES	0.25	50	50	ENSMUST00000183801.8	ENSMUSG00000038535.18	Zfp280d	chr9	protein_coding	zinc finger protein 280D
chr9	72246330;72258852	72258807;72267568	+	72246330;72247621	72246898;72267568	MXE	0.5	100	100	ENSMUST00000183801.8	ENSMUSG00000038535.18	Zfp280d	chr9	protein_coding	zinc finger protein 280D
chr9	72266862	72267568	+	72247621	72267568	A5SS	0.25	50	50	ENSMUST00000183801.8	ENSMUSG00000038535.18	Zfp280d	chr9	protein_coding	zinc finger protein 280D
chr9	72220042	72226006	+	72220042	72220807	3pMXE	0.33	50	50	ENSMUST00000183608.2	ENSMUSG00000038535.18	Zfp280d	chr9	protein_coding	zinc finger protein 280D
chr9	72246330	72267568	+	72246330	72258807	A3SS&ES	0.33	50	50	ENSMUST00000184019.8	ENSMUSG00000038535.18	Zfp280d	chr9	protein_coding	zinc finger protein 280D
chr9	72258852	72266804	+	72258852	72267575	A3SS	0.33	50	50	ENSMUST00000184019.8	ENSMUSG00000038535.18	Zfp280d	chr9	protein_coding	zinc finger protein 280D
chr9	72316770	72316952	-	72269762	72316952	A3SS	0.5	50	50	ENSMUST00000180997.3	ENSMUSG00000097211.3	BC065403	chr9	lncRNA	cDNA sequence BC065403
chr9	72303516	72309851	+	72303516	72310808	A3SS	0.5	50	50	ENSMUST00000184671.2	ENSMUSG00000098959.2	Gm27230	chr9	lncRNA	predicted gene 27230
chr9	72353591	72359863	+	72353591	72355811	3pMXE	0.5	50	50	ENSMUST00000183809.8	ENSMUSG00000032221.15	Mns1	chr9	protein_coding	meiosis-specific nuclear structural protein 1
chr9	72356841	72359863	+	72353591	72359863	A5SS	0.5	50	50	ENSMUST00000184604.8	ENSMUSG00000032221.15	Mns1	chr9	protein_coding	meiosis-specific nuclear structural protein 1
chr9	72381074	72385622	-	72381074;72385192	72385019;72385622	ES	0.33	50	50	ENSMUST00000184312.8	ENSMUSG00000090626.10	Tex9	chr9	protein_coding	testis expressed gene 9
chr9	72381074;72383428	72383330;72385019	-	72381074	72385019	cassetteExon	0.5	100	100	ENSMUST00000184312.8	ENSMUSG00000090626.10	Tex9	chr9	protein_coding	testis expressed gene 9
chr9	72385704;72387283	72387206;72387879	-	72385704	72387879	cassetteExon	0.5	100	100	ENSMUST00000184312.8	ENSMUSG00000090626.10	Tex9	chr9	protein_coding	testis expressed gene 9
chr9	72388057;72389805	72389729;72391351	-	72388057	72391351	cassetteExon	0.5	100	100	ENSMUST00000184312.8	ENSMUSG00000090626.10	Tex9	chr9	protein_coding	testis expressed gene 9
chr9	72388057;72389811	72389729;72391351	-	72388057	72391351	cassetteExon	0.5	100	100	ENSMUST00000184312.8	ENSMUSG00000090626.10	Tex9	chr9	protein_coding	testis expressed gene 9
chr9	72368560	72369138	-	72366441	72369138	A3SS	0.5	50	50	ENSMUST00000184312.8	ENSMUSG00000090626.10	Tex9	chr9	protein_coding	testis expressed gene 9
chr9	72379923	72380940	-	72369272	72380940	A3SS	0.5	50	50	ENSMUST00000184312.8	ENSMUSG00000090626.10	Tex9	chr9	protein_coding	testis expressed gene 9
chr9	72369272	72379387	-	72369272	72380940	A5SS	0.33	50	50	ENSMUST00000184312.8	ENSMUSG00000090626.10	Tex9	chr9	protein_coding	testis expressed gene 9
chr9	72388029	72389729	-	72388057	72389729	A3SS	0.5	50	50	ENSMUST00000085358.12	ENSMUSG00000090626.10	Tex9	chr9	protein_coding	testis expressed gene 9
chr9	72389805	72391351	-	72389811	72391351	A3SS	0.33	50	50	ENSMUST00000085358.12	ENSMUSG00000090626.10	Tex9	chr9	protein_coding	testis expressed gene 9
chr9	72369272	72385622	-	72369272	72380940	5pMXE	0.33	50	50	ENSMUST00000183399.8	ENSMUSG00000090626.10	Tex9	chr9	protein_coding	testis expressed gene 9
chr9	72369272	72385622	-	72369272;72381074	72380940;72385622	ES	0.33	50	50	ENSMUST00000183574.8	ENSMUSG00000090626.10	Tex9	chr9	protein_coding	testis expressed gene 9
chr9	72381074	72383330	-	72381074	72385622	A5SS	0.33	50	50	ENSMUST00000183574.8	ENSMUSG00000090626.10	Tex9	chr9	protein_coding	testis expressed gene 9
chr9	72369272	72380940	-	72369272;72379923	72379387;72380940	ES	0.5	50	50	ENSMUST00000183856.8	ENSMUSG00000090626.10	Tex9	chr9	protein_coding	testis expressed gene 9
chr9	72385192	72385622	-	72369272	72385622	A3SS	0.33	50	50	ENSMUST00000184066.8	ENSMUSG00000090626.10	Tex9	chr9	protein_coding	testis expressed gene 9
chr9	72369272	72379387	-	72369272	72385622	A5SS	0.33	50	50	ENSMUST00000184066.8	ENSMUSG00000090626.10	Tex9	chr9	protein_coding	testis expressed gene 9
chr9	72385704	72387879	-	72385704	72387206	A5SS	0.5	50	50	ENSMUST00000184066.8	ENSMUSG00000090626.10	Tex9	chr9	protein_coding	testis expressed gene 9
chr9	72388057	72391351	-	72389811	72391351	A3SS&ES	0.33	50	50	ENSMUST00000183428.8	ENSMUSG00000090626.10	Tex9	chr9	protein_coding	testis expressed gene 9
chr9	72381074	72385622	-	72385192	72385622	3pMXE	0.33	50	50	ENSMUST00000183551.2	ENSMUSG00000090626.10	Tex9	chr9	protein_coding	testis expressed gene 9
chr9	72500642	72507599	+	72500642	72514905	A3SS	0.5	50	50	ENSMUST00000163401.9	ENSMUSG00000037674.16	Rfx7	chr9	protein_coding	regulatory factor X, 7
chr9	72584813	72616394	+	72584813;72593396	72593343;72616394	ES	0.5	50	50	ENSMUST00000034740.15	ENSMUSG00000032216.16	Nedd4	chr9	protein_coding	neural precursor cell expressed, developmentally down-regulated 4
chr9	72633812;72635748	72635549;72638184	+	72633812	72638184	cassetteExon	0.5	100	100	ENSMUST00000034740.15	ENSMUSG00000032216.16	Nedd4	chr9	protein_coding	neural precursor cell expressed, developmentally down-regulated 4
chr9	72569895	72570394	+	72569895	72577234	A3SS	0.5	50	50	ENSMUST00000034740.15	ENSMUSG00000032216.16	Nedd4	chr9	protein_coding	neural precursor cell expressed, developmentally down-regulated 4
chr9	72602148	72625500	+	72619548	72625500	A5SS&ES	0.5	50	50	ENSMUST00000034740.15	ENSMUSG00000032216.16	Nedd4	chr9	protein_coding	neural precursor cell expressed, developmentally down-regulated 4
chr9	72646810	72647450	+	72646810	72649935	A3SS	0.5	50	50	ENSMUST00000184020.8	ENSMUSG00000032216.16	Nedd4	chr9	protein_coding	neural precursor cell expressed, developmentally down-regulated 4
chr9	72648969	72649935	+	72646810	72649935	A5SS	0.5	50	50	ENSMUST00000184020.8	ENSMUSG00000032216.16	Nedd4	chr9	protein_coding	neural precursor cell expressed, developmentally down-regulated 4
chr9	72879360	72904684	+	72879360	72879609	3pMXE	0.5	50	50	ENSMUST00000098567.9	ENSMUSG00000092192.8	Dnaaf4	chr9	protein_coding	dynein axonemal assembly factor 4
chr9	72868011	72868540	+	72868011	72871373	A3SS	0.5	50	50	ENSMUST00000098567.9	ENSMUSG00000092192.8	Dnaaf4	chr9	protein_coding	dynein axonemal assembly factor 4
chr9	72869422	72871373	+	72868011	72871373	A5SS	0.5	50	50	ENSMUST00000098567.9	ENSMUSG00000092192.8	Dnaaf4	chr9	protein_coding	dynein axonemal assembly factor 4
chr9	72909157	72912937	+	72909157	72912923	A3SS	0.5	50	50	ENSMUST00000149692.2	ENSMUSG00000089865.3	Gm44503	chr9	protein_coding	predicted readthrough transcript (NMD candidate), 44503
chr9	72892955	72904684	+	72879360	72904684	A5SS	0.33	50	50	ENSMUST00000149692.2	ENSMUSG00000089865.3	Gm44503	chr9	protein_coding	predicted readthrough transcript (NMD candidate), 44503
chr9	72899888	72904684	+	72879360	72904684	A5SS	0.33	50	50	ENSMUST00000149692.2	ENSMUSG00000089865.3	Gm44503	chr9	protein_coding	predicted readthrough transcript (NMD candidate), 44503
chr9	72906426	72906745	+	72906420	72906745	A5SS	0.5	50	50	ENSMUST00000149692.2	ENSMUSG00000089865.3	Gm44503	chr9	protein_coding	predicted readthrough transcript (NMD candidate), 44503
chr9	72920274	72922614	+	72920608	72922614	A5SS	0.5	50	50	ENSMUST00000149692.2	ENSMUSG00000089865.3	Gm44503	chr9	protein_coding	predicted readthrough transcript (NMD candidate), 44503
chr9	72892955;72899888	72899776;72904684	+	72892955	72904684	cassetteExon	0.5	100	100	ENSMUST00000037977.15	ENSMUSG00000034563.17	Ccpg1	chr9	protein_coding	cell cycle progression 1
chr9	72929768;72930664	72930592;72936848	-	72929768;72930562	72930511;72936848	MXE	0.5	100	100	ENSMUST00000183746.8	ENSMUSG00000079469.11	Pigb	chr9	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class B
chr9	72922332	72923431	-	72922473	72923431	A3SS	0.5	50	50	ENSMUST00000184035.8	ENSMUSG00000079469.11	Pigb	chr9	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class B
chr9	72952293	72982675	+	72952293;72968406	72968258;72982675	ES	0.5	50	50	ENSMUST00000184146.8	ENSMUSG00000032202.12	Rab27a	chr9	protein_coding	RAB27A, member RAS oncogene family
chr9	73011171	73022170	+	73011171	73011625	3pMXE	0.5	50	50	ENSMUST00000173734.9	ENSMUSG00000092622.9	Khdc3	chr9	protein_coding	KH domain containing 3, subcortical maternal complex member
chr9	73010574	73010845	+	73010574	73010647	A3SS	0.5	50	50	ENSMUST00000167514.2	ENSMUSG00000092622.9	Khdc3	chr9	protein_coding	KH domain containing 3, subcortical maternal complex member
chr9	73020762	73022170	+	73011171	73022170	A5SS	0.25	50	50	ENSMUST00000174203.3	ENSMUSG00000092310.3	Gm20509	chr9	protein_coding	predicted gene 20509
chr9	73020865	73022170	+	73011171	73022170	A5SS	0.25	50	50	ENSMUST00000174203.3	ENSMUSG00000092310.3	Gm20509	chr9	protein_coding	predicted gene 20509
chr9	73022018	73022170	+	73011171	73022170	A5SS	0.25	50	50	ENSMUST00000174203.3	ENSMUSG00000092310.3	Gm20509	chr9	protein_coding	predicted gene 20509
chr9	73020865	73022170	+	73020762	73022170	A5SS	0.25	50	50	ENSMUST00000169399.8	ENSMUSG00000032215.16	Rsl24d1	chr9	protein_coding	ribosomal L24 domain containing 1
chr9	73022018	73022170	+	73020762	73022170	A5SS	0.25	50	50	ENSMUST00000169399.8	ENSMUSG00000032215.16	Rsl24d1	chr9	protein_coding	ribosomal L24 domain containing 1
chr9	73020865	73022160	+	73020865	73022170	A3SS	0.5	50	50	ENSMUST00000034738.14	ENSMUSG00000032215.16	Rsl24d1	chr9	protein_coding	ribosomal L24 domain containing 1
chr9	73022018	73022170	+	73020865	73022170	A5SS	0.25	50	50	ENSMUST00000034738.14	ENSMUSG00000032215.16	Rsl24d1	chr9	protein_coding	ribosomal L24 domain containing 1
chr9	74047015	74050770	+	74047015	74049233	3pMXE	0.5	50	50	ENSMUST00000098564.9	ENSMUSG00000044976.18	Wdr72	chr9	protein_coding	WD repeat domain 72
chr9	74017981	74019889	+	74017981	74041683	A3SS	0.5	50	50	ENSMUST00000098564.9	ENSMUSG00000044976.18	Wdr72	chr9	protein_coding	WD repeat domain 72
chr9	74055629	74056003	+	74055665	74056003	A5SS	0.5	50	50	ENSMUST00000055879.9	ENSMUSG00000044976.18	Wdr72	chr9	protein_coding	WD repeat domain 72
chr9	74181597	74183218	+	74126054	74183218	A5SS	0.5	50	50	ENSMUST00000055879.9	ENSMUSG00000044976.18	Wdr72	chr9	protein_coding	WD repeat domain 72
chr9	74756493	74767164	+	74756493	74758043	3pMXE	0.25	50	50	ENSMUST00000160979.9	ENSMUSG00000066477.14	Gm16551	chr9	lncRNA	predicted gene 16551
chr9	74756493	74796588	+	74756493	74758043	3pMXE	0.25	50	50	ENSMUST00000160979.9	ENSMUSG00000066477.14	Gm16551	chr9	lncRNA	predicted gene 16551
chr9	74756493	74758082	+	74756493	74758043	A3SS	0.25	50	50	ENSMUST00000160979.9	ENSMUSG00000066477.14	Gm16551	chr9	lncRNA	predicted gene 16551
chr9	74756493	74796588	+	74756493	74767164	3pMXE	0.25	50	50	ENSMUST00000161862.8	ENSMUSG00000066477.14	Gm16551	chr9	lncRNA	predicted gene 16551
chr9	74756493	74758082	+	74756493	74767164	A3SS	0.25	50	50	ENSMUST00000161862.8	ENSMUSG00000066477.14	Gm16551	chr9	lncRNA	predicted gene 16551
chr9	74756493	74796588	+	74756493	74758082	3pMXE	0.25	50	50	ENSMUST00000160017.2	ENSMUSG00000066477.14	Gm16551	chr9	lncRNA	predicted gene 16551
chr9	74770683	74796588	+	74756493	74796588	A5SS	0.33	50	50	ENSMUST00000160950.3	ENSMUSG00000093662.3	Gm20649	chr9	lncRNA	predicted gene 20649
chr9	74773921	74796588	+	74756493	74796588	A5SS	0.33	50	50	ENSMUST00000160950.3	ENSMUSG00000093662.3	Gm20649	chr9	lncRNA	predicted gene 20649
chr9	74773921	74796588	+	74770683	74796588	A5SS	0.33	50	50	ENSMUST00000056006.11	ENSMUSG00000043013.11	Onecut1	chr9	protein_coding	one cut domain, family member 1
chr9	74861112	74911547	+	74861112	74861191	3pMXE	0.5	50	50	ENSMUST00000216809.2	ENSMUSG00000034858.17	Fam214a	chr9	protein_coding	family with sequence similarity 214, member A
chr9	74860341	74860996	+	74860290	74860996	A5SS	0.33	50	50	ENSMUST00000216809.2	ENSMUSG00000034858.17	Fam214a	chr9	protein_coding	family with sequence similarity 214, member A
chr9	74860560	74860996	+	74860290	74860996	A5SS	0.33	50	50	ENSMUST00000216809.2	ENSMUSG00000034858.17	Fam214a	chr9	protein_coding	family with sequence similarity 214, member A
chr9	74860560	74860996	+	74860341	74860996	A5SS	0.33	50	50	ENSMUST00000215370.2	ENSMUSG00000034858.17	Fam214a	chr9	protein_coding	family with sequence similarity 214, member A
chr9	74883558	74911547	+	74861112	74911547	A5SS	0.5	50	50	ENSMUST00000215370.2	ENSMUSG00000034858.17	Fam214a	chr9	protein_coding	family with sequence similarity 214, member A
chr9	74931028	74932933	+	74930935	74932933	A5SS	0.5	50	50	ENSMUST00000215370.2	ENSMUSG00000034858.17	Fam214a	chr9	protein_coding	family with sequence similarity 214, member A
chr9	74945243	74963917	+	74945243;74959637	74959515;74963917	ES	0.5	50	50	ENSMUST00000168166.8	ENSMUSG00000007656.14	Arpp19	chr9	protein_coding	cAMP-regulated phosphoprotein 19
chr9	74945243;74950580	74950495;74959515	+	74945243	74959515	cassetteExon	0.5	100	100	ENSMUST00000168166.8	ENSMUSG00000007656.14	Arpp19	chr9	protein_coding	cAMP-regulated phosphoprotein 19
chr9	74945005	74945189	+	74945001	74945189	A5SS	0.5	50	50	ENSMUST00000168166.8	ENSMUSG00000007656.14	Arpp19	chr9	protein_coding	cAMP-regulated phosphoprotein 19
chr9	74945247	74959515	+	74945243	74959515	A5SS	0.25	50	50	ENSMUST00000168166.8	ENSMUSG00000007656.14	Arpp19	chr9	protein_coding	cAMP-regulated phosphoprotein 19
chr9	74959285	74959515	+	74945243	74959515	A5SS	0.25	50	50	ENSMUST00000168166.8	ENSMUSG00000007656.14	Arpp19	chr9	protein_coding	cAMP-regulated phosphoprotein 19
chr9	74945243	74963917	+	74959637	74963917	A5SS&ES	0.5	50	50	ENSMUST00000168301.2	ENSMUSG00000007656.14	Arpp19	chr9	protein_coding	cAMP-regulated phosphoprotein 19
chr9	74950580	74959515	+	74945247	74959515	A5SS	0.25	50	50	ENSMUST00000168301.2	ENSMUSG00000007656.14	Arpp19	chr9	protein_coding	cAMP-regulated phosphoprotein 19
chr9	74959285	74959515	+	74945247	74959515	A5SS	0.25	50	50	ENSMUST00000168301.2	ENSMUSG00000007656.14	Arpp19	chr9	protein_coding	cAMP-regulated phosphoprotein 19
chr9	74959285	74959515	+	74950580	74959515	A5SS	0.25	50	50	ENSMUST00000167885.8	ENSMUSG00000007656.14	Arpp19	chr9	protein_coding	cAMP-regulated phosphoprotein 19
chr9	74945243	74950495	+	74945243	74963917	A3SS	0.33	50	50	ENSMUST00000169188.2	ENSMUSG00000007656.14	Arpp19	chr9	protein_coding	cAMP-regulated phosphoprotein 19
chr9	75023578	75030193	+	75023578;75028126	75027955;75030193	ES	0.5	50	50	ENSMUST00000123128.8	ENSMUSG00000034593.17	Myo5a	chr9	protein_coding	myosin VA
chr9	75093404	75097182	+	75093404;75094812	75094804;75097182	ES	0.5	50	50	ENSMUST00000123128.8	ENSMUSG00000034593.17	Myo5a	chr9	protein_coding	myosin VA
chr9	75101419	75104925	+	75101419;75103482	75103408;75104925	ES	0.5	50	50	ENSMUST00000123128.8	ENSMUSG00000034593.17	Myo5a	chr9	protein_coding	myosin VA
chr9	75097282;75099746	75099666;75101221	+	75097282	75101221	cassetteExon	0.5	100	100	ENSMUST00000123128.8	ENSMUSG00000034593.17	Myo5a	chr9	protein_coding	myosin VA
chr9	75101419	75104925	+	75101419	75103408	3pMXE	0.5	50	50	ENSMUST00000129281.8	ENSMUSG00000034593.17	Myo5a	chr9	protein_coding	myosin VA
chr9	75097282	75101221	+	75097282	75099666	3pMXE	0.5	50	50	ENSMUST00000143355.2	ENSMUSG00000034593.17	Myo5a	chr9	protein_coding	myosin VA
chr9	75157798;75157986	75157872;75158723	+	75157798	75158723	cassetteExon	0.5	100	100	ENSMUST00000036555.8	ENSMUSG00000033590.9	Myo5c	chr9	protein_coding	myosin VC
chr9	75139457	75139705	+	75139457	75150044	A3SS	0.5	50	50	ENSMUST00000036555.8	ENSMUSG00000033590.9	Myo5c	chr9	protein_coding	myosin VC
chr9	75202533	75203356	+	75202533	75203292	A3SS	0.5	50	50	ENSMUST00000036555.8	ENSMUSG00000033590.9	Myo5c	chr9	protein_coding	myosin VC
chr9	75165466	75169490	+	75165506	75169490	A5SS	0.5	50	50	ENSMUST00000036555.8	ENSMUSG00000033590.9	Myo5c	chr9	protein_coding	myosin VC
chr9	75221665;75232429	75232236;75234415	+	75221665	75234415	cassetteExon	0.5	100	100	ENSMUST00000213990.2	ENSMUSG00000032192.10	Gnb5	chr9	protein_coding	guanine nucleotide binding protein (G protein), beta 5
chr9	75241642	75242933	+	75241583	75242933	A5SS	0.5	50	50	ENSMUST00000213990.2	ENSMUSG00000032192.10	Gnb5	chr9	protein_coding	guanine nucleotide binding protein (G protein), beta 5
chr9	75250516	75251763	+	75250886	75251763	A5SS&ES	0.5	50	50	ENSMUST00000213990.2	ENSMUSG00000032192.10	Gnb5	chr9	protein_coding	guanine nucleotide binding protein (G protein), beta 5
chr9	75306033	75317137	-	75306033	75316484	5pMXE	0.33	50	50	ENSMUST00000168937.8	ENSMUSG00000042688.17	Mapk6	chr9	protein_coding	mitogen-activated protein kinase 6
chr9	75306033	75317145	-	75306033	75316484	5pMXE	0.33	50	50	ENSMUST00000168937.8	ENSMUSG00000042688.17	Mapk6	chr9	protein_coding	mitogen-activated protein kinase 6
chr9	75306033	75317137	-	75306033	75317145	A5SS	0.33	50	50	ENSMUST00000049355.11	ENSMUSG00000042688.17	Mapk6	chr9	protein_coding	mitogen-activated protein kinase 6
chr9	75321658	75324330	+	75321658	75322486	3pMXE	0.5	50	50	ENSMUST00000180574.2	ENSMUSG00000097021.8	4933433G15Rik	chr9	lncRNA	RIKEN cDNA 4933433G15 gene
chr9	75383792	75385261	+	75375965	75385261	A5SS	0.5	50	50	ENSMUST00000208453.2	ENSMUSG00000109032.2	Gm7972	chr9	transcribed_unprocessed_pseudogene	predicted gene 7972
chr9	75390185	75390381	+	75388946	75390381	A5SS	0.5	50	50	ENSMUST00000208434.2	ENSMUSG00000109032.2	Gm7972	chr9	transcribed_unprocessed_pseudogene	predicted gene 7972
chr9	75428660	75436651	-	75423877	75436651	A3SS	0.5	50	50	ENSMUST00000072232.9	ENSMUSG00000058587.10	Tmod3	chr9	protein_coding	tropomodulin 3
chr9	75407432	75409705	-	75407432	75412122	A5SS	0.5	50	50	ENSMUST00000072232.9	ENSMUSG00000058587.10	Tmod3	chr9	protein_coding	tropomodulin 3
chr9	75439874	75448908	-	75439874	75466782	A5SS	0.5	50	50	ENSMUST00000072232.9	ENSMUSG00000058587.10	Tmod3	chr9	protein_coding	tropomodulin 3
chr9	75504684;75517595	75517383;75518306	-	75504684	75518306	cassetteExon	0.5	100	100	ENSMUST00000098552.10	ENSMUSG00000032186.16	Tmod2	chr9	protein_coding	tropomodulin 2
chr9	75504684;75517961	75517811;75518306	-	75504684	75518306	cassetteExon	0.5	100	100	ENSMUST00000098552.10	ENSMUSG00000032186.16	Tmod2	chr9	protein_coding	tropomodulin 2
chr9	75504678	75518306	-	75504684	75518306	A3SS	0.25	50	50	ENSMUST00000098552.10	ENSMUSG00000032186.16	Tmod2	chr9	protein_coding	tropomodulin 2
chr9	75504684	75504802	-	75504684	75518306	A5SS	0.2	50	50	ENSMUST00000098552.10	ENSMUSG00000032186.16	Tmod2	chr9	protein_coding	tropomodulin 2
chr9	75504684	75506050	-	75504684	75518306	A5SS	0.2	50	50	ENSMUST00000098552.10	ENSMUSG00000032186.16	Tmod2	chr9	protein_coding	tropomodulin 2
chr9	75517595	75518306	-	75504678	75518306	A3SS	0.25	50	50	ENSMUST00000064433.11	ENSMUSG00000032186.16	Tmod2	chr9	protein_coding	tropomodulin 2
chr9	75517961	75518306	-	75504678	75518306	A3SS	0.25	50	50	ENSMUST00000064433.11	ENSMUSG00000032186.16	Tmod2	chr9	protein_coding	tropomodulin 2
chr9	75504684;75517466	75517383;75517811	-	75504684	75517811	cassetteExon	0.5	100	100	ENSMUST00000215614.2	ENSMUSG00000032186.16	Tmod2	chr9	protein_coding	tropomodulin 2
chr9	75504684;75517595	75517383;75518306	-	75504684;75517961	75517811;75518306	MXE	0.5	100	100	ENSMUST00000215614.2	ENSMUSG00000032186.16	Tmod2	chr9	protein_coding	tropomodulin 2
chr9	75504684	75504802	-	75504684	75517811	A5SS	0.2	50	50	ENSMUST00000215614.2	ENSMUSG00000032186.16	Tmod2	chr9	protein_coding	tropomodulin 2
chr9	75504684	75506050	-	75504684	75517811	A5SS	0.2	50	50	ENSMUST00000215614.2	ENSMUSG00000032186.16	Tmod2	chr9	protein_coding	tropomodulin 2
chr9	75504684	75506050	-	75504684	75504802	5pMXE	0.2	50	50	ENSMUST00000164100.2	ENSMUSG00000032186.16	Tmod2	chr9	protein_coding	tropomodulin 2
chr9	75504684	75517383	-	75504684	75504802	5pMXE	0.2	50	50	ENSMUST00000164100.2	ENSMUSG00000032186.16	Tmod2	chr9	protein_coding	tropomodulin 2
chr9	75504684	75517383	-	75504684	75506050	5pMXE	0.2	50	50	ENSMUST00000215036.2	ENSMUSG00000032186.16	Tmod2	chr9	protein_coding	tropomodulin 2
chr9	75517595	75518306	-	75517961	75518306	A3SS&ES	0.25	50	50	ENSMUST00000217233.2	ENSMUSG00000032186.16	Tmod2	chr9	protein_coding	tropomodulin 2
chr9	75533306	75542668	+	75533319	75542668	A5SS	0.33	50	50	ENSMUST00000034702.6	ENSMUSG00000032184.6	Lysmd2	chr9	protein_coding	LysM, putative peptidoglycan-binding, domain containing 2
chr9	75533873	75542668	+	75533319	75542668	A5SS	0.33	50	50	ENSMUST00000034702.6	ENSMUSG00000032184.6	Lysmd2	chr9	protein_coding	LysM, putative peptidoglycan-binding, domain containing 2
chr9	75533873	75542668	+	75533306	75542668	A5SS	0.33	50	50	ENSMUST00000214961.2	ENSMUSG00000032184.6	Lysmd2	chr9	protein_coding	LysM, putative peptidoglycan-binding, domain containing 2
chr9	75589461	75590220	-	75589461;75589601	75589556;75590220	ES	0.33	50	50	ENSMUST00000034699.8	ENSMUSG00000032181.8	Scg3	chr9	protein_coding	secretogranin III
chr9	75589601	75590917	-	75589601;75590272	75590220;75590917	ES	0.33	50	50	ENSMUST00000034699.8	ENSMUSG00000032181.8	Scg3	chr9	protein_coding	secretogranin III
chr9	75589691	75590220	-	75589601	75590220	A3SS	0.33	50	50	ENSMUST00000034699.8	ENSMUSG00000032181.8	Scg3	chr9	protein_coding	secretogranin III
chr9	75568672	75570490	-	75568672	75570475	A5SS	0.5	50	50	ENSMUST00000034699.8	ENSMUSG00000032181.8	Scg3	chr9	protein_coding	secretogranin III
chr9	75590272	75590574	-	75590272	75590917	A5SS	0.5	50	50	ENSMUST00000034699.8	ENSMUSG00000032181.8	Scg3	chr9	protein_coding	secretogranin III
chr9	75589461	75590917	-	75589461;75590272	75590220;75590917	ES	0.33	50	50	ENSMUST00000215603.2	ENSMUSG00000032181.8	Scg3	chr9	protein_coding	secretogranin III
chr9	75589461;75589601	75589556;75590917	-	75589461;75590272	75590220;75590917	MXE	0.5	100	100	ENSMUST00000215603.2	ENSMUSG00000032181.8	Scg3	chr9	protein_coding	secretogranin III
chr9	75589461;75589691	75589556;75590220	-	75589461	75590220	cassetteExon	0.5	100	100	ENSMUST00000215603.2	ENSMUSG00000032181.8	Scg3	chr9	protein_coding	secretogranin III
chr9	75589461;75589601	75589556;75590917	-	75589461	75590917	cassetteExon	0.5	100	100	ENSMUST00000214244.2	ENSMUSG00000032181.8	Scg3	chr9	protein_coding	secretogranin III
chr9	75589461	75590220	-	75589691	75590220	3pMXE	0.33	50	50	ENSMUST00000215722.2	ENSMUSG00000032181.8	Scg3	chr9	protein_coding	secretogranin III
chr9	75746975	75750680	+	75746975	75780537	A3SS	0.5	50	50	ENSMUST00000012281.8	ENSMUSG00000032179.8	Bmp5	chr9	protein_coding	bone morphogenetic protein 5
chr9	75963841	75981950	+	75963841;75980004	75979909;75981950	ES	0.5	50	50	ENSMUST00000008052.13	ENSMUSG00000007908.15	Hmgcll1	chr9	protein_coding	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1
chr9	75963841;75991773	75991585;76037594	+	75963841	76037594	cassetteExon	0.5	100	100	ENSMUST00000183425.8	ENSMUSG00000007908.15	Hmgcll1	chr9	protein_coding	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1
chr9	75922464	75979909	+	75922464	75963453	A3SS&ES	0.5	50	50	ENSMUST00000183425.8	ENSMUSG00000007908.15	Hmgcll1	chr9	protein_coding	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1
chr9	75963841	75979909	+	75963841	76037594	A3SS	0.25	50	50	ENSMUST00000183425.8	ENSMUSG00000007908.15	Hmgcll1	chr9	protein_coding	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1
chr9	75963841	75981950	+	75963841	76037594	A3SS	0.25	50	50	ENSMUST00000183425.8	ENSMUSG00000007908.15	Hmgcll1	chr9	protein_coding	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1
chr9	75963841	75979909	+	75963841	75991585	A3SS	0.25	50	50	ENSMUST00000183979.8	ENSMUSG00000007908.15	Hmgcll1	chr9	protein_coding	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1
chr9	75963841	75981950	+	75963841	75991585	A3SS	0.25	50	50	ENSMUST00000183979.8	ENSMUSG00000007908.15	Hmgcll1	chr9	protein_coding	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1
chr9	75988736	75991585	+	75963841	75991585	A5SS	0.5	50	50	ENSMUST00000183979.8	ENSMUSG00000007908.15	Hmgcll1	chr9	protein_coding	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1
chr9	75922464;75963841	75963453;75979909	+	75922464	75979909	cassetteExon	0.5	100	100	ENSMUST00000183505.2	ENSMUSG00000007908.15	Hmgcll1	chr9	protein_coding	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1
chr9	75922464;75980004	75979909;75981950	+	75922464;75963841	75963453;75981950	MXE	0.5	100	100	ENSMUST00000117981.3	ENSMUSG00000007908.15	Hmgcll1	chr9	protein_coding	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1
chr9	76075372;76100735	76100485;76104310	-	76075372	76104310	cassetteExon	0.5	100	100	ENSMUST00000184693.8	ENSMUSG00000059383.15	Gfral	chr9	protein_coding	GDNF family receptor alpha like
chr9	76934286	76938971	-	76934290	76938971	A3SS	0.5	50	50	ENSMUST00000184897.8	ENSMUSG00000032357.13	Tinag	chr9	protein_coding	tubulointerstitial nephritis antigen
chr9	76869536	76904175	-	76869536	76904170	A5SS	0.5	50	50	ENSMUST00000184897.8	ENSMUSG00000032357.13	Tinag	chr9	protein_coding	tubulointerstitial nephritis antigen
chr9	77009675	77072047	-	77009675	77045632	5pMXE	0.33	50	50	ENSMUST00000183636.2	ENSMUSG00000032355.17	Mlip	chr9	protein_coding	muscular LMNA-interacting protein
chr9	77009675;77020309	77020256;77045632	-	77009675	77045632	cassetteExon	0.5	100	100	ENSMUST00000183636.2	ENSMUSG00000032355.17	Mlip	chr9	protein_coding	muscular LMNA-interacting protein
chr9	77009675;77020330	77020256;77045632	-	77009675	77045632	cassetteExon	0.5	100	100	ENSMUST00000183636.2	ENSMUSG00000032355.17	Mlip	chr9	protein_coding	muscular LMNA-interacting protein
chr9	77097665	77097954	-	77097665;77097872	77097789;77097954	ES	0.5	50	50	ENSMUST00000185144.8	ENSMUSG00000032355.17	Mlip	chr9	protein_coding	muscular LMNA-interacting protein
chr9	77124330	77146674	-	77124330;77138311	77136767;77146674	ES	0.2	50	50	ENSMUST00000185144.8	ENSMUSG00000032355.17	Mlip	chr9	protein_coding	muscular LMNA-interacting protein
chr9	77009675;77045838	77045632;77072047	-	77009675	77072047	cassetteExon	0.5	100	100	ENSMUST00000185144.8	ENSMUSG00000032355.17	Mlip	chr9	protein_coding	muscular LMNA-interacting protein
chr9	77147066;77151009	77150854;77254977	-	77147066	77254977	cassetteExon	0.5	100	100	ENSMUST00000185144.8	ENSMUSG00000032355.17	Mlip	chr9	protein_coding	muscular LMNA-interacting protein
chr9	77138236	77146674	-	77138311	77146674	A3SS	0.2	50	50	ENSMUST00000185144.8	ENSMUSG00000032355.17	Mlip	chr9	protein_coding	muscular LMNA-interacting protein
chr9	77009675	77020256	-	77009675	77072047	A5SS	0.33	50	50	ENSMUST00000185144.8	ENSMUSG00000032355.17	Mlip	chr9	protein_coding	muscular LMNA-interacting protein
chr9	77147066	77159029	-	77147066	77254977	A5SS	0.33	50	50	ENSMUST00000185144.8	ENSMUSG00000032355.17	Mlip	chr9	protein_coding	muscular LMNA-interacting protein
chr9	77098019;77124330	77124259;77146674	-	77098019	77146674	cassetteExon	0.5	100	100	ENSMUST00000034910.16	ENSMUSG00000032355.17	Mlip	chr9	protein_coding	muscular LMNA-interacting protein
chr9	77138236	77146674	-	77098019	77146674	A3SS	0.2	50	50	ENSMUST00000034910.16	ENSMUSG00000032355.17	Mlip	chr9	protein_coding	muscular LMNA-interacting protein
chr9	77138311	77146674	-	77098019	77146674	A3SS	0.2	50	50	ENSMUST00000034910.16	ENSMUSG00000032355.17	Mlip	chr9	protein_coding	muscular LMNA-interacting protein
chr9	77088678;77098019	77097606;77146674	-	77088678	77146674	cassetteExon	0.5	100	100	ENSMUST00000184848.8	ENSMUSG00000032355.17	Mlip	chr9	protein_coding	muscular LMNA-interacting protein
chr9	77124330	77146674	-	77088678	77146674	A3SS	0.2	50	50	ENSMUST00000184848.8	ENSMUSG00000032355.17	Mlip	chr9	protein_coding	muscular LMNA-interacting protein
chr9	77138236	77146674	-	77088678	77146674	A3SS	0.2	50	50	ENSMUST00000184848.8	ENSMUSG00000032355.17	Mlip	chr9	protein_coding	muscular LMNA-interacting protein
chr9	77138311	77146674	-	77088678	77146674	A3SS	0.2	50	50	ENSMUST00000184848.8	ENSMUSG00000032355.17	Mlip	chr9	protein_coding	muscular LMNA-interacting protein
chr9	77020330	77045632	-	77020309	77045632	A3SS	0.33	50	50	ENSMUST00000184415.8	ENSMUSG00000032355.17	Mlip	chr9	protein_coding	muscular LMNA-interacting protein
chr9	77138236	77146674	-	77124330	77146674	A3SS	0.2	50	50	ENSMUST00000184415.8	ENSMUSG00000032355.17	Mlip	chr9	protein_coding	muscular LMNA-interacting protein
chr9	77138311	77146674	-	77124330	77146674	A3SS	0.2	50	50	ENSMUST00000184415.8	ENSMUSG00000032355.17	Mlip	chr9	protein_coding	muscular LMNA-interacting protein
chr9	77124330	77136767	-	77124330	77146674	A5SS	0.5	50	50	ENSMUST00000184415.8	ENSMUSG00000032355.17	Mlip	chr9	protein_coding	muscular LMNA-interacting protein
chr9	77147066	77159029	-	77147066	77150854	A5SS&ES	0.33	50	50	ENSMUST00000184415.8	ENSMUSG00000032355.17	Mlip	chr9	protein_coding	muscular LMNA-interacting protein
chr9	77151009	77159029	-	77151009	77254977	A5SS	0.33	50	50	ENSMUST00000184415.8	ENSMUSG00000032355.17	Mlip	chr9	protein_coding	muscular LMNA-interacting protein
chr9	77151009	77247698	-	77151009	77254977	A5SS	0.33	50	50	ENSMUST00000184415.8	ENSMUSG00000032355.17	Mlip	chr9	protein_coding	muscular LMNA-interacting protein
chr9	77124330	77146674	-	77124330;77138236	77136767;77146674	ES	0.2	50	50	ENSMUST00000184322.8	ENSMUSG00000032355.17	Mlip	chr9	protein_coding	muscular LMNA-interacting protein
chr9	77147066;77151009	77150854;77159029	-	77147066	77159029	cassetteExon	0.5	100	100	ENSMUST00000184322.8	ENSMUSG00000032355.17	Mlip	chr9	protein_coding	muscular LMNA-interacting protein
chr9	77151009	77247698	-	77151009	77159029	5pMXE	0.33	50	50	ENSMUST00000183955.8	ENSMUSG00000032355.17	Mlip	chr9	protein_coding	muscular LMNA-interacting protein
chr9	77379512	77451747	-	77379512;77406633	77406516;77451747	ES	0.5	50	50	ENSMUST00000183873.8	ENSMUSG00000032352.17	Lrrc1	chr9	protein_coding	leucine rich repeat containing 1
chr9	77356869	77358640	-	77349574	77358640	A3SS	0.5	50	50	ENSMUST00000183873.8	ENSMUSG00000032352.17	Lrrc1	chr9	protein_coding	leucine rich repeat containing 1
chr9	77341412	77342373	-	77341412	77342329	A5SS	0.5	50	50	ENSMUST00000183873.8	ENSMUSG00000032352.17	Lrrc1	chr9	protein_coding	leucine rich repeat containing 1
chr9	77406633	77439697	-	77406633	77451747	A5SS	0.33	50	50	ENSMUST00000183873.8	ENSMUSG00000032352.17	Lrrc1	chr9	protein_coding	leucine rich repeat containing 1
chr9	77406633	77451306	-	77406633	77451747	A5SS	0.33	50	50	ENSMUST00000183873.8	ENSMUSG00000032352.17	Lrrc1	chr9	protein_coding	leucine rich repeat containing 1
chr9	77406633	77439697	-	77406633	77451306	A5SS	0.33	50	50	ENSMUST00000113421.10	ENSMUSG00000032352.17	Lrrc1	chr9	protein_coding	leucine rich repeat containing 1
chr9	77673581	77682361	+	77662241	77682361	A5SS	0.33	50	50	ENSMUST00000034905.9	ENSMUSG00000032350.10	Gclc	chr9	protein_coding	glutamate-cysteine ligase, catalytic subunit
chr9	77673587	77682361	+	77662241	77682361	A5SS	0.33	50	50	ENSMUST00000034905.9	ENSMUSG00000032350.10	Gclc	chr9	protein_coding	glutamate-cysteine ligase, catalytic subunit
chr9	77673587	77682361	+	77673581	77682361	A5SS	0.5	50	50	ENSMUST00000216315.2	ENSMUSG00000032350.10	Gclc	chr9	protein_coding	glutamate-cysteine ligase, catalytic subunit
chr9	77829303	77864423	+	77824808	77864423	A5SS	0.33	50	50	ENSMUST00000034904.14	ENSMUSG00000032349.14	Elovl5	chr9	protein_coding	ELOVL family member 5, elongation of long chain fatty acids (yeast)
chr9	77848696	77864423	+	77824808	77864423	A5SS	0.33	50	50	ENSMUST00000034904.14	ENSMUSG00000032349.14	Elovl5	chr9	protein_coding	ELOVL family member 5, elongation of long chain fatty acids (yeast)
chr9	77848696	77864423	+	77829303	77864423	A5SS	0.33	50	50	ENSMUST00000133757.8	ENSMUSG00000032349.14	Elovl5	chr9	protein_coding	ELOVL family member 5, elongation of long chain fatty acids (yeast)
chr9	77899940;77908335	77908280;77908529	+	77899940	77908529	cassetteExon	0.5	100	100	ENSMUST00000213816.2	ENSMUSG00000111610.2	Gm34829	chr9	lncRNA	predicted gene, 34829
chr9	78008968	78015573	-	78008968;78011636	78011553;78015573	ES	0.5	50	50	ENSMUST00000085311.13	ENSMUSG00000001366.15	Fbxo9	chr9	protein_coding	f-box protein 9
chr9	78011636	78016284	-	78011636	78015573	5pMXE	0.5	50	50	ENSMUST00000085311.13	ENSMUSG00000001366.15	Fbxo9	chr9	protein_coding	f-box protein 9
chr9	78008968	78015573	-	78008968	78011553	A5SS&ES	0.5	50	50	ENSMUST00000001402.14	ENSMUSG00000001366.15	Fbxo9	chr9	protein_coding	f-box protein 9
chr9	78016763	78017255	+	78016763	78038577	A3SS	0.5	50	50	ENSMUST00000118869.8	ENSMUSG00000009828.16	Cilk1	chr9	protein_coding	ciliogenesis associated kinase 1
chr9	78020737	78038577	+	78016763	78038577	A5SS	0.5	50	50	ENSMUST00000118869.8	ENSMUSG00000009828.16	Cilk1	chr9	protein_coding	ciliogenesis associated kinase 1
chr9	78020737	78032238	+	78020737	78025630	3pMXE	0.33	50	50	ENSMUST00000149821.2	ENSMUSG00000009828.16	Cilk1	chr9	protein_coding	ciliogenesis associated kinase 1
chr9	78020737	78038577	+	78020737	78025630	3pMXE	0.33	50	50	ENSMUST00000149821.2	ENSMUSG00000009828.16	Cilk1	chr9	protein_coding	ciliogenesis associated kinase 1
chr9	78020737	78032238	+	78020737	78038577	A3SS	0.33	50	50	ENSMUST00000142776.2	ENSMUSG00000009828.16	Cilk1	chr9	protein_coding	ciliogenesis associated kinase 1
chr9	78197284	78202066	+	78197284;78201397	78201284;78202066	ES	0.5	50	50	ENSMUST00000119823.8	ENSMUSG00000074179.12	Gsta5	chr9	protein_coding	glutathione S-transferase alpha 5
chr9	78219591	78220187	-	78219591;78219917	78219752;78220187	ES	0.33	50	50	ENSMUST00000173321.2	ENSMUSG00000066463.14	Omt2a	chr9	protein_coding	oocyte maturation, alpha
chr9	78219818	78220187	-	78219917	78220187	A3SS	0.33	50	50	ENSMUST00000173321.2	ENSMUSG00000066463.14	Omt2a	chr9	protein_coding	oocyte maturation, alpha
chr9	78219591;78219818	78219752;78220187	-	78219591	78220187	cassetteExon	0.5	100	100	ENSMUST00000173608.2	ENSMUSG00000066463.14	Omt2a	chr9	protein_coding	oocyte maturation, alpha
chr9	78220357	78221979	-	78220357	78220609	5pMXE	0.5	50	50	ENSMUST00000166056.9	ENSMUSG00000066463.14	Omt2a	chr9	protein_coding	oocyte maturation, alpha
chr9	78235974;78236413	78236248;78236574	+	78235974	78236574	cassetteExon	0.5	100	100	ENSMUST00000187667.7	ENSMUSG00000038750.13	Omt2b	chr9	protein_coding	oocyte maturation, beta
chr9	78249220;78249879	78249769;78254371	-	78249220	78254371	cassetteExon	0.5	100	100	ENSMUST00000034902.12	ENSMUSG00000057933.11	Gsta2	chr9	protein_coding	glutathione S-transferase, alpha 2 (Yc2)
chr9	78249220	78254371	-	78249220	78249769	A5SS&ES	0.5	50	50	ENSMUST00000125479.8	ENSMUSG00000057933.11	Gsta2	chr9	protein_coding	glutathione S-transferase, alpha 2 (Yc2)
chr9	78249879	78254371	-	78249879	78262941	A5SS	0.5	50	50	ENSMUST00000125479.8	ENSMUSG00000057933.11	Gsta2	chr9	protein_coding	glutathione S-transferase, alpha 2 (Yc2)
chr9	78340509	78341595	-	78340549	78341595	A3SS	0.5	50	50	ENSMUST00000070742.14	ENSMUSG00000032344.18	Cgas	chr9	protein_coding	cyclic GMP-AMP synthase
chr9	78343009	78344585	-	78342965	78344585	A3SS	0.5	50	50	ENSMUST00000070742.14	ENSMUSG00000032344.18	Cgas	chr9	protein_coding	cyclic GMP-AMP synthase
chr9	78357117	78364492	+	78357117;78360335	78360046;78364492	ES	0.5	50	50	ENSMUST00000034896.13	ENSMUSG00000032342.14	Mto1	chr9	protein_coding	mitochondrial tRNA translation optimization 1
chr9	78387970	78396356	-	78387970	78388921	5pMXE	0.5	50	50	ENSMUST00000042235.15	ENSMUSG00000037742.15	Eef1a1	chr9	protein_coding	eukaryotic translation elongation factor 1 alpha 1
chr9	78477226	78478304	-	78468088	78478304	A3SS	0.5	50	50	ENSMUST00000052441.12	ENSMUSG00000049624.15	Slc17a5	chr9	protein_coding	solute carrier family 17 (anion/sugar transporter), member 5
chr9	78482035	78484312	-	78482019	78484312	A3SS	0.5	50	50	ENSMUST00000052441.12	ENSMUSG00000049624.15	Slc17a5	chr9	protein_coding	solute carrier family 17 (anion/sugar transporter), member 5
chr9	78484467	78485793	-	78484545	78485793	A3SS	0.5	50	50	ENSMUST00000052441.12	ENSMUSG00000049624.15	Slc17a5	chr9	protein_coding	solute carrier family 17 (anion/sugar transporter), member 5
chr9	79508461	79509482	-	79507289	79509482	A3SS	0.5	50	50	ENSMUST00000135009.8	ENSMUSG00000032332.18	Col12a1	chr9	protein_coding	collagen, type XII, alpha 1
chr9	79622434	79622646	-	79615214	79622646	A3SS	0.5	50	50	ENSMUST00000071750.13	ENSMUSG00000032332.18	Col12a1	chr9	protein_coding	collagen, type XII, alpha 1
chr9	79665861	79666432	-	79665861	79666922	A5SS	0.5	50	50	ENSMUST00000034881.8	ENSMUSG00000032330.8	Cox7a2	chr9	protein_coding	cytochrome c oxidase subunit 7A2
chr9	79684613	79700256	-	79684613;79687930	79687823;79700256	ES	0.5	50	50	ENSMUST00000034878.12	ENSMUSG00000032328.13	Tmem30a	chr9	protein_coding	transmembrane protein 30A
chr9	79805758	79919925	-	79805758	79884738	5pMXE	0.33	50	50	ENSMUST00000239133.2	ENSMUSG00000034898.18	Filip1	chr9	protein_coding	filamin A interacting protein 1
chr9	79727988	79738156	-	79727988	79760904	A5SS	0.5	50	50	ENSMUST00000239133.2	ENSMUSG00000034898.18	Filip1	chr9	protein_coding	filamin A interacting protein 1
chr9	79805758	79869193	-	79805758	79884738	A5SS	0.33	50	50	ENSMUST00000239133.2	ENSMUSG00000034898.18	Filip1	chr9	protein_coding	filamin A interacting protein 1
chr9	79805758	79919925	-	79805758	79869193	5pMXE	0.33	50	50	ENSMUST00000172973.2	ENSMUSG00000034898.18	Filip1	chr9	protein_coding	filamin A interacting protein 1
chr9	79994805	79999549	+	79994805;79997188	79997131;79999549	ES	0.33	50	50	ENSMUST00000175673.2	ENSMUSG00000034252.15	Senp6	chr9	protein_coding	SUMO/sentrin specific peptidase 6
chr9	79975370	79994712	+	79974854	79994712	A5SS	0.5	50	50	ENSMUST00000175673.2	ENSMUSG00000034252.15	Senp6	chr9	protein_coding	SUMO/sentrin specific peptidase 6
chr9	80025924	80029146	+	80025924;80028642	80028609;80029146	ES	0.5	50	50	ENSMUST00000037484.15	ENSMUSG00000034252.15	Senp6	chr9	protein_coding	SUMO/sentrin specific peptidase 6
chr9	80038140	80043740	+	80038140;80040263	80040171;80043740	ES	0.5	50	50	ENSMUST00000037484.15	ENSMUSG00000034252.15	Senp6	chr9	protein_coding	SUMO/sentrin specific peptidase 6
chr9	80000923;80006188	80006168;80010976	+	80000923	80010976	cassetteExon	0.5	100	100	ENSMUST00000037484.15	ENSMUSG00000034252.15	Senp6	chr9	protein_coding	SUMO/sentrin specific peptidase 6
chr9	79974854;79994805	79994712;79999549	+	79974854	79999549	cassetteExon	0.5	100	100	ENSMUST00000176640.8	ENSMUSG00000034252.15	Senp6	chr9	protein_coding	SUMO/sentrin specific peptidase 6
chr9	79997188	79999549	+	79974854	79999549	A5SS	0.33	50	50	ENSMUST00000176640.8	ENSMUSG00000034252.15	Senp6	chr9	protein_coding	SUMO/sentrin specific peptidase 6
chr9	79974854	79994712	+	79974854	80010976	A3SS	0.33	50	50	ENSMUST00000164859.8	ENSMUSG00000034252.15	Senp6	chr9	protein_coding	SUMO/sentrin specific peptidase 6
chr9	79974854	79999549	+	79974854	80010976	A3SS	0.33	50	50	ENSMUST00000164859.8	ENSMUSG00000034252.15	Senp6	chr9	protein_coding	SUMO/sentrin specific peptidase 6
chr9	80000923	80010976	+	79974854	80010976	A5SS	0.33	50	50	ENSMUST00000164859.8	ENSMUSG00000034252.15	Senp6	chr9	protein_coding	SUMO/sentrin specific peptidase 6
chr9	80006188	80010976	+	79974854	80010976	A5SS	0.33	50	50	ENSMUST00000164859.8	ENSMUSG00000034252.15	Senp6	chr9	protein_coding	SUMO/sentrin specific peptidase 6
chr9	80011046	80018593	+	80011046	80023814	A3SS	0.5	50	50	ENSMUST00000176360.8	ENSMUSG00000034252.15	Senp6	chr9	protein_coding	SUMO/sentrin specific peptidase 6
chr9	80021396	80023814	+	80011046	80023814	A5SS	0.5	50	50	ENSMUST00000176360.8	ENSMUSG00000034252.15	Senp6	chr9	protein_coding	SUMO/sentrin specific peptidase 6
chr9	80207948	80214242	+	80207948;80210581	80210555;80214242	ES	0.33	50	50	ENSMUST00000035889.15	ENSMUSG00000033577.19	Myo6	chr9	protein_coding	myosin VI
chr9	80199799;80203963	80203925;80206428	+	80199799	80206428	cassetteExon	0.5	100	100	ENSMUST00000035889.15	ENSMUSG00000033577.19	Myo6	chr9	protein_coding	myosin VI
chr9	80199799	80200809	+	80199799	80206428	A3SS	0.25	50	50	ENSMUST00000035889.15	ENSMUSG00000033577.19	Myo6	chr9	protein_coding	myosin VI
chr9	80199799	80201227	+	80199799	80206428	A3SS	0.25	50	50	ENSMUST00000035889.15	ENSMUSG00000033577.19	Myo6	chr9	protein_coding	myosin VI
chr9	80213180	80214242	+	80210581	80214242	A5SS	0.33	50	50	ENSMUST00000035889.15	ENSMUSG00000033577.19	Myo6	chr9	protein_coding	myosin VI
chr9	80199799	80203925	+	80199799;80200835	80200809;80203925	ES	0.33	50	50	ENSMUST00000113268.8	ENSMUSG00000033577.19	Myo6	chr9	protein_coding	myosin VI
chr9	80199799;80201256	80201227;80203925	+	80199799;80200835	80200809;80203925	MXE	0.5	100	100	ENSMUST00000113268.8	ENSMUSG00000033577.19	Myo6	chr9	protein_coding	myosin VI
chr9	80200835;80201256	80201227;80203925	+	80200835	80203925	cassetteExon	0.5	100	100	ENSMUST00000113268.8	ENSMUSG00000033577.19	Myo6	chr9	protein_coding	myosin VI
chr9	80199799	80201227	+	80199799;80200835	80200809;80201227	ES	0.5	50	50	ENSMUST00000184480.8	ENSMUSG00000033577.19	Myo6	chr9	protein_coding	myosin VI
chr9	80199799	80203925	+	80199799;80201256	80201227;80203925	ES	0.33	50	50	ENSMUST00000127779.9	ENSMUSG00000033577.19	Myo6	chr9	protein_coding	myosin VI
chr9	80213180	80214242	+	80207948	80214242	A5SS	0.33	50	50	ENSMUST00000113266.8	ENSMUSG00000033577.19	Myo6	chr9	protein_coding	myosin VI
chr9	80199799;80201256	80200809;80203925	+	80199799	80203925	cassetteExon	0.5	100	100	ENSMUST00000076140.4	ENSMUSG00000033577.19	Myo6	chr9	protein_coding	myosin VI
chr9	80317518;80322936	80322706;80347276	-	80317518	80347276	cassetteExon	0.5	100	100	ENSMUST00000085289.12	ENSMUSG00000032343.16	Impg1	chr9	protein_coding	interphotoreceptor matrix proteoglycan 1
chr9	81514332;81518990	81518888;81524600	+	81514332	81524600	cassetteExon	0.5	100	100	ENSMUST00000181893.8	ENSMUSG00000097466.9	D430036J16Rik	chr9	lncRNA	RIKEN cDNA D430036J16 gene
chr9	81521236	81524600	+	81514332	81524600	A5SS	0.33	50	50	ENSMUST00000181893.8	ENSMUSG00000097466.9	D430036J16Rik	chr9	lncRNA	RIKEN cDNA D430036J16 gene
chr9	81518990	81524600	+	81518990;81521236	81521214;81524600	ES	0.33	50	50	ENSMUST00000181447.8	ENSMUSG00000097466.9	D430036J16Rik	chr9	lncRNA	RIKEN cDNA D430036J16 gene
chr9	81514533	81518888	+	81514332	81518888	A5SS	0.5	50	50	ENSMUST00000181447.8	ENSMUSG00000097466.9	D430036J16Rik	chr9	lncRNA	RIKEN cDNA D430036J16 gene
chr9	81745970	81809151	+	81745970;81772420	81772175;81809151	ES	0.5	50	50	ENSMUST00000057067.10	ENSMUSG00000043289.13	Mei4	chr9	protein_coding	meiotic double-stranded break formation protein 4
chr9	81861310	82086610	+	81861310	81907572	3pMXE	0.5	50	50	ENSMUST00000057067.10	ENSMUSG00000043289.13	Mei4	chr9	protein_coding	meiotic double-stranded break formation protein 4
chr9	82712392	82728352	+	82712392;82719536	82719471;82728352	ES	0.5	50	50	ENSMUST00000113245.9	ENSMUSG00000032251.13	Irak1bp1	chr9	protein_coding	interleukin-1 receptor-associated kinase 1 binding protein 1
chr9	82810251	82811028	-	82810251;82810922	82810882;82811028	ES	0.5	50	50	ENSMUST00000034787.12	ENSMUSG00000032253.14	Phip	chr9	protein_coding	pleckstrin homology domain interacting protein
chr9	82812427	82814899	-	82812427;82814639	82814539;82814899	ES	0.5	50	50	ENSMUST00000034787.12	ENSMUSG00000032253.14	Phip	chr9	protein_coding	pleckstrin homology domain interacting protein
chr9	82797477;82798077	82798015;82808450	-	82797477	82808450	cassetteExon	0.5	100	100	ENSMUST00000034787.12	ENSMUSG00000032253.14	Phip	chr9	protein_coding	pleckstrin homology domain interacting protein
chr9	82795940	82797349	-	82795966	82797349	A3SS	0.5	50	50	ENSMUST00000034787.12	ENSMUSG00000032253.14	Phip	chr9	protein_coding	pleckstrin homology domain interacting protein
chr9	82841904	82855770	-	82841904	82856727	A5SS	0.5	50	50	ENSMUST00000034787.12	ENSMUSG00000032253.14	Phip	chr9	protein_coding	pleckstrin homology domain interacting protein
chr9	82812427	82814899	-	82812427	82814539	5pMXE	0.5	50	50	ENSMUST00000186089.7	ENSMUSG00000032253.14	Phip	chr9	protein_coding	pleckstrin homology domain interacting protein
chr9	82992482	82992885	-	82992482	82992828	5pMXE	0.2	50	50	ENSMUST00000189777.2	ENSMUSG00000066456.15	Hmgn3	chr9	protein_coding	high mobility group nucleosomal binding domain 3
chr9	82992482	82993046	-	82992482	82992828	5pMXE	0.2	50	50	ENSMUST00000189777.2	ENSMUSG00000066456.15	Hmgn3	chr9	protein_coding	high mobility group nucleosomal binding domain 3
chr9	82992482	82993087	-	82992482	82992828	5pMXE	0.2	50	50	ENSMUST00000189777.2	ENSMUSG00000066456.15	Hmgn3	chr9	protein_coding	high mobility group nucleosomal binding domain 3
chr9	82992482	82992841	-	82992482	82992828	A5SS	0.2	50	50	ENSMUST00000189777.2	ENSMUSG00000066456.15	Hmgn3	chr9	protein_coding	high mobility group nucleosomal binding domain 3
chr9	82992482	82993046	-	82992482;82992927	82992841;82993046	ES	0.5	50	50	ENSMUST00000187193.7	ENSMUSG00000066456.15	Hmgn3	chr9	protein_coding	high mobility group nucleosomal binding domain 3
chr9	82992482	82992885	-	82992482	82992841	A5SS	0.2	50	50	ENSMUST00000187193.7	ENSMUSG00000066456.15	Hmgn3	chr9	protein_coding	high mobility group nucleosomal binding domain 3
chr9	82992482	82993087	-	82992482	82992841	A5SS&ES	0.2	50	50	ENSMUST00000187193.7	ENSMUSG00000066456.15	Hmgn3	chr9	protein_coding	high mobility group nucleosomal binding domain 3
chr9	82992482	82992885	-	82992482	82993087	A5SS	0.2	50	50	ENSMUST00000161796.9	ENSMUSG00000066456.15	Hmgn3	chr9	protein_coding	high mobility group nucleosomal binding domain 3
chr9	82992482	82993046	-	82992482	82993087	A5SS	0.2	50	50	ENSMUST00000161796.9	ENSMUSG00000066456.15	Hmgn3	chr9	protein_coding	high mobility group nucleosomal binding domain 3
chr9	82992482;82992927	82992828;82993046	-	82992482	82993046	cassetteExon	0.5	100	100	ENSMUST00000162246.9	ENSMUSG00000066456.15	Hmgn3	chr9	protein_coding	high mobility group nucleosomal binding domain 3
chr9	82992482;82992927	82992885;82993046	-	82992482	82993046	cassetteExon	0.5	100	100	ENSMUST00000162246.9	ENSMUSG00000066456.15	Hmgn3	chr9	protein_coding	high mobility group nucleosomal binding domain 3
chr9	82992482	82993046	-	82992482	82992885	A5SS	0.2	50	50	ENSMUST00000190154.2	ENSMUSG00000066456.15	Hmgn3	chr9	protein_coding	high mobility group nucleosomal binding domain 3
chr9	82992482	82993046	-	82992927	82993046	3pMXE	0.5	50	50	ENSMUST00000185359.2	ENSMUSG00000066456.15	Hmgn3	chr9	protein_coding	high mobility group nucleosomal binding domain 3
chr9	83123229	83135676	-	83123229;83132161	83132027;83135676	ES	0.5	50	50	ENSMUST00000184605.8	ENSMUSG00000098747.8	Gm27216	chr9	lncRNA	predicted gene 27216
chr9	83135735	83136469	-	83135735	83135997	5pMXE	0.5	50	50	ENSMUST00000184605.8	ENSMUSG00000098747.8	Gm27216	chr9	lncRNA	predicted gene 27216
chr9	83273926	83280565	-	83273926;83277432	83277210;83280565	ES	0.33	50	50	ENSMUST00000190514.7	ENSMUSG00000032258.16	Lca5	chr9	protein_coding	Leber congenital amaurosis 5 (human)
chr9	83278108	83280565	-	83277432	83280565	A3SS	0.33	50	50	ENSMUST00000190514.7	ENSMUSG00000032258.16	Lca5	chr9	protein_coding	Leber congenital amaurosis 5 (human)
chr9	83309014;83311001	83310933;83323094	-	83309014	83323094	cassetteExon	0.5	100	100	ENSMUST00000034793.15	ENSMUSG00000032258.16	Lca5	chr9	protein_coding	Leber congenital amaurosis 5 (human)
chr9	83278108	83280565	-	83273926	83280565	A3SS	0.33	50	50	ENSMUST00000034793.15	ENSMUSG00000032258.16	Lca5	chr9	protein_coding	Leber congenital amaurosis 5 (human)
chr9	83309014	83316592	-	83309014	83323094	A5SS	0.25	50	50	ENSMUST00000034793.15	ENSMUSG00000032258.16	Lca5	chr9	protein_coding	Leber congenital amaurosis 5 (human)
chr9	83309014	83322962	-	83309014	83323094	A5SS	0.25	50	50	ENSMUST00000034793.15	ENSMUSG00000032258.16	Lca5	chr9	protein_coding	Leber congenital amaurosis 5 (human)
chr9	83309014;83311001	83310933;83322962	-	83309014	83322962	cassetteExon	0.5	100	100	ENSMUST00000034791.15	ENSMUSG00000032258.16	Lca5	chr9	protein_coding	Leber congenital amaurosis 5 (human)
chr9	83309014	83316592	-	83309014	83322962	A5SS	0.25	50	50	ENSMUST00000034791.15	ENSMUSG00000032258.16	Lca5	chr9	protein_coding	Leber congenital amaurosis 5 (human)
chr9	83309014	83310933	-	83309014	83316592	A5SS	0.25	50	50	ENSMUST00000186802.2	ENSMUSG00000032258.16	Lca5	chr9	protein_coding	Leber congenital amaurosis 5 (human)
chr9	83309014	83322962	-	83309014	83310933	A5SS&ES	0.25	50	50	ENSMUST00000188548.7	ENSMUSG00000032258.16	Lca5	chr9	protein_coding	Leber congenital amaurosis 5 (human)
chr9	83311001	83322962	-	83311001	83323094	A5SS	0.5	50	50	ENSMUST00000188548.7	ENSMUSG00000032258.16	Lca5	chr9	protein_coding	Leber congenital amaurosis 5 (human)
chr9	83309014	83323094	-	83309014	83310933	A5SS&ES	0.25	50	50	ENSMUST00000188907.2	ENSMUSG00000032258.16	Lca5	chr9	protein_coding	Leber congenital amaurosis 5 (human)
chr9	83459674	83518144	+	83459674;83476791	83476711;83518144	ES	0.5	50	50	ENSMUST00000188241.7	ENSMUSG00000032261.17	Sh3bgrl2	chr9	protein_coding	SH3 domain binding glutamic acid-rich protein like 2
chr9	83476791	83479278	+	83476791	83518144	A3SS	0.5	50	50	ENSMUST00000188241.7	ENSMUSG00000032261.17	Sh3bgrl2	chr9	protein_coding	SH3 domain binding glutamic acid-rich protein like 2
chr9	83458963	83459489	+	83430556	83459489	A5SS	0.5	50	50	ENSMUST00000188241.7	ENSMUSG00000032261.17	Sh3bgrl2	chr9	protein_coding	SH3 domain binding glutamic acid-rich protein like 2
chr9	83667255	83687992	-	83672217	83687992	A3SS&ES	0.5	50	50	ENSMUST00000034796.14	ENSMUSG00000032262.14	Elovl4	chr9	protein_coding	elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4
chr9	83726194	83726403	+	83726194	83727966	A3SS	0.5	50	50	ENSMUST00000188445.7	ENSMUSG00000038379.16	Ttk	chr9	protein_coding	Ttk protein kinase
chr9	83745622	83750186	+	83745622	83747131	A3SS&ES	0.5	50	50	ENSMUST00000188445.7	ENSMUSG00000038379.16	Ttk	chr9	protein_coding	Ttk protein kinase
chr9	83716932	83717824	+	83716812	83717824	A5SS	0.5	50	50	ENSMUST00000188445.7	ENSMUSG00000038379.16	Ttk	chr9	protein_coding	Ttk protein kinase
chr9	83830968	83834577	+	83807412	83834577	A5SS	0.5	50	50	ENSMUST00000190637.7	ENSMUSG00000032263.15	Bckdhb	chr9	protein_coding	branched chain ketoacid dehydrogenase E1, beta polypeptide
chr9	83917930	83951158	+	83894672	83951158	A5SS	0.33	50	50	ENSMUST00000190637.7	ENSMUSG00000032263.15	Bckdhb	chr9	protein_coding	branched chain ketoacid dehydrogenase E1, beta polypeptide
chr9	83927972	83951158	+	83894672	83951158	A5SS	0.33	50	50	ENSMUST00000190637.7	ENSMUSG00000032263.15	Bckdhb	chr9	protein_coding	branched chain ketoacid dehydrogenase E1, beta polypeptide
chr9	83989680	84004287	+	83951244	84004287	A5SS	0.5	50	50	ENSMUST00000190637.7	ENSMUSG00000032263.15	Bckdhb	chr9	protein_coding	branched chain ketoacid dehydrogenase E1, beta polypeptide
chr9	83927972	83951158	+	83917930	83951158	A5SS	0.33	50	50	ENSMUST00000189819.7	ENSMUSG00000032263.15	Bckdhb	chr9	protein_coding	branched chain ketoacid dehydrogenase E1, beta polypeptide
chr9	83892036	83899303	-	83891566	83899303	A3SS	0.5	50	50	ENSMUST00000217260.2	ENSMUSG00000111757.2	Gm46124	chr9	lncRNA	predicted gene, 46124
chr9	84658830	84664752	+	84658830;84662119	84662022;84664752	ES	0.5	50	50	ENSMUST00000187735.2	ENSMUSG00000099724.3	4930554C24Rik	chr9	lncRNA	RIKEN cDNA 4930554C24 gene
chr9	84664961	84667929	+	84664961	84665999	3pMXE	0.33	50	50	ENSMUST00000187735.2	ENSMUSG00000099724.3	4930554C24Rik	chr9	lncRNA	RIKEN cDNA 4930554C24 gene
chr9	84664961	84674653	+	84664961	84665999	3pMXE	0.33	50	50	ENSMUST00000187735.2	ENSMUSG00000099724.3	4930554C24Rik	chr9	lncRNA	RIKEN cDNA 4930554C24 gene
chr9	84664961;84668008	84667929;84674653	+	84664961	84674653	cassetteExon	0.5	100	100	ENSMUST00000217202.2	ENSMUSG00000099724.3	4930554C24Rik	chr9	lncRNA	RIKEN cDNA 4930554C24 gene
chr9	84674771	84707654	+	84674771	84739540	A3SS	0.5	50	50	ENSMUST00000217202.2	ENSMUSG00000099724.3	4930554C24Rik	chr9	lncRNA	RIKEN cDNA 4930554C24 gene
chr9	84734420	84739540	+	84674771	84739540	A5SS	0.5	50	50	ENSMUST00000217202.2	ENSMUSG00000099724.3	4930554C24Rik	chr9	lncRNA	RIKEN cDNA 4930554C24 gene
chr9	85208858	85209096	-	85208858	85209041	A5SS	0.5	50	50	ENSMUST00000034802.15	ENSMUSG00000032265.15	Tent5a	chr9	protein_coding	terminal nucleotidyltransferase 5A
chr9	85217763	85230056	-	85217650	85230056	A3SS	0.5	50	50	ENSMUST00000214276.2	ENSMUSG00000111840.2	Gm48832	chr9	lncRNA	predicted gene, 48832
chr9	85603399	85606100	-	85603399;85604505	85604328;85606100	ES	0.5	50	50	ENSMUST00000039213.15	ENSMUSG00000035941.16	Ibtk	chr9	protein_coding	inhibitor of Bruton agammaglobulinemia tyrosine kinase
chr9	85601997	85602797	-	85602002	85602797	A3SS	0.5	50	50	ENSMUST00000039213.15	ENSMUSG00000035941.16	Ibtk	chr9	protein_coding	inhibitor of Bruton agammaglobulinemia tyrosine kinase
chr9	85705178	85724805	-	85705173	85724805	A3SS	0.5	50	50	ENSMUST00000069896.7	ENSMUSG00000056031.14	9330154J02Rik	chr9	lncRNA	RIKEN cDNA 9330154J02 gene
chr9	85705178	85724805	-	85705178	85724718	A5SS	0.5	50	50	ENSMUST00000185960.2	ENSMUSG00000056031.14	9330154J02Rik	chr9	lncRNA	RIKEN cDNA 9330154J02 gene
chr9	85725008	85725704	+	85724645	85725704	A5SS	0.33	50	50	ENSMUST00000006559.14	ENSMUSG00000035274.14	Tpbg	chr9	protein_coding	trophoblast glycoprotein
chr9	85725547	85725704	+	85724645	85725704	A5SS	0.33	50	50	ENSMUST00000006559.14	ENSMUSG00000035274.14	Tpbg	chr9	protein_coding	trophoblast glycoprotein
chr9	85725547	85725704	+	85725008	85725704	A5SS	0.33	50	50	ENSMUST00000098500.5	ENSMUSG00000035274.14	Tpbg	chr9	protein_coding	trophoblast glycoprotein
chr9	86189929	86304894	-	86189929;86254532	86254394;86304894	ES	0.5	50	50	ENSMUST00000034986.14	ENSMUSG00000032415.15	Ube2cbp	chr9	protein_coding	ubiquitin-conjugating enzyme E2C binding protein
chr9	86322807	86333867	-	86322807;86330906	86330816;86333867	ES	0.5	50	50	ENSMUST00000034986.14	ENSMUSG00000032415.15	Ube2cbp	chr9	protein_coding	ubiquitin-conjugating enzyme E2C binding protein
chr9	86382948	86385046	+	86382948;86384036	86383927;86385046	ES	0.5	50	50	ENSMUST00000190957.7	ENSMUSG00000034973.17	Dop1a	chr9	protein_coding	DOP1 leucine zipper like protein A
chr9	86388572	86389557	+	86388572;86388953	86388924;86389557	ES	0.33	50	50	ENSMUST00000190957.7	ENSMUSG00000034973.17	Dop1a	chr9	protein_coding	DOP1 leucine zipper like protein A
chr9	86403912	86405007	+	86403912;86404927	86404816;86405007	ES	0.5	50	50	ENSMUST00000190957.7	ENSMUSG00000034973.17	Dop1a	chr9	protein_coding	DOP1 leucine zipper like protein A
chr9	86427446	86430854	+	86427446;86430359	86430223;86430854	ES	0.5	50	50	ENSMUST00000190957.7	ENSMUSG00000034973.17	Dop1a	chr9	protein_coding	DOP1 leucine zipper like protein A
chr9	86382948	86383954	+	86382948	86383927	A3SS	0.33	50	50	ENSMUST00000190957.7	ENSMUSG00000034973.17	Dop1a	chr9	protein_coding	DOP1 leucine zipper like protein A
chr9	86388367	86388437	+	86388367	86388458	A3SS	0.33	50	50	ENSMUST00000190957.7	ENSMUSG00000034973.17	Dop1a	chr9	protein_coding	DOP1 leucine zipper like protein A
chr9	86389790	86394611	+	86389790	86394614	A3SS	0.5	50	50	ENSMUST00000190957.7	ENSMUSG00000034973.17	Dop1a	chr9	protein_coding	DOP1 leucine zipper like protein A
chr9	86406402	86406626	+	86406402	86408825	A3SS	0.5	50	50	ENSMUST00000190957.7	ENSMUSG00000034973.17	Dop1a	chr9	protein_coding	DOP1 leucine zipper like protein A
chr9	86388367	86389557	+	86388367;86388572	86388437;86389557	ES	0.33	50	50	ENSMUST00000186290.7	ENSMUSG00000034973.17	Dop1a	chr9	protein_coding	DOP1 leucine zipper like protein A
chr9	86382948;86384036	86383954;86385046	+	86382948	86385046	cassetteExon	0.5	100	100	ENSMUST00000190906.7	ENSMUSG00000034973.17	Dop1a	chr9	protein_coding	DOP1 leucine zipper like protein A
chr9	86382948	86385046	+	86382948	86383927	A3SS	0.33	50	50	ENSMUST00000187607.6	ENSMUSG00000034973.17	Dop1a	chr9	protein_coding	DOP1 leucine zipper like protein A
chr9	86388367	86389557	+	86388367;86388572	86388458;86389557	ES	0.33	50	50	ENSMUST00000188675.7	ENSMUSG00000034973.17	Dop1a	chr9	protein_coding	DOP1 leucine zipper like protein A
chr9	86388367;86388953	86388458;86389557	+	86388367	86389557	cassetteExon	0.5	100	100	ENSMUST00000186418.2	ENSMUSG00000034973.17	Dop1a	chr9	protein_coding	DOP1 leucine zipper like protein A
chr9	86438418	86440448	-	86438418;86439678	86439556;86440448	ES	0.5	50	50	ENSMUST00000070064.11	ENSMUSG00000056131.14	Pgm3	chr9	protein_coding	phosphoglucomutase 3
chr9	86438418	86440448	-	86438418	86439556	5pMXE	0.5	50	50	ENSMUST00000190924.2	ENSMUSG00000056131.14	Pgm3	chr9	protein_coding	phosphoglucomutase 3
chr9	86438418	86440448	-	86439678	86440448	3pMXE	0.5	50	50	ENSMUST00000187251.2	ENSMUSG00000056131.14	Pgm3	chr9	protein_coding	phosphoglucomutase 3
chr9	86454141	86454890	+	86454110	86454890	A5SS	0.33	50	50	ENSMUST00000185566.7	ENSMUSG00000032417.11	Rwdd2a	chr9	protein_coding	RWD domain containing 2A
chr9	86454270	86454890	+	86454110	86454890	A5SS	0.33	50	50	ENSMUST00000185566.7	ENSMUSG00000032417.11	Rwdd2a	chr9	protein_coding	RWD domain containing 2A
chr9	86454141	86454890	+	86454270	86454890	A5SS	0.33	50	50	ENSMUST00000034988.10	ENSMUSG00000032417.11	Rwdd2a	chr9	protein_coding	RWD domain containing 2A
chr9	86495691	86499030	-	86495691	86501778	A5SS	0.33	50	50	ENSMUST00000034989.15	ENSMUSG00000032418.16	Me1	chr9	protein_coding	malic enzyme 1, NADP(+)-dependent, cytosolic
chr9	86495691	86500659	-	86495691	86501778	A5SS	0.33	50	50	ENSMUST00000034989.15	ENSMUSG00000032418.16	Me1	chr9	protein_coding	malic enzyme 1, NADP(+)-dependent, cytosolic
chr9	86562005	86569011	-	86562005	86577726	A5SS	0.5	50	50	ENSMUST00000034989.15	ENSMUSG00000032418.16	Me1	chr9	protein_coding	malic enzyme 1, NADP(+)-dependent, cytosolic
chr9	86495691	86499030	-	86495691	86500659	A5SS	0.33	50	50	ENSMUST00000189968.7	ENSMUSG00000032418.16	Me1	chr9	protein_coding	malic enzyme 1, NADP(+)-dependent, cytosolic
chr9	86649389	86655572	-	86649389;86651614	86651512;86655572	ES	0.5	50	50	ENSMUST00000239074.2	ENSMUSG00000033419.17	Snap91	chr9	protein_coding	synaptosomal-associated protein 91
chr9	86655676	86657645	-	86655676;86656333	86656250;86657645	ES	0.5	50	50	ENSMUST00000239074.2	ENSMUSG00000033419.17	Snap91	chr9	protein_coding	synaptosomal-associated protein 91
chr9	86665487	86673538	-	86665487;86672192	86672109;86673538	ES	0.5	50	50	ENSMUST00000239074.2	ENSMUSG00000033419.17	Snap91	chr9	protein_coding	synaptosomal-associated protein 91
chr9	86674789	86680591	-	86674789;86675517	86675410;86680591	ES	0.33	50	50	ENSMUST00000239074.2	ENSMUSG00000033419.17	Snap91	chr9	protein_coding	synaptosomal-associated protein 91
chr9	86761634	86762525	-	86761634	86762314	5pMXE	0.33	50	50	ENSMUST00000239074.2	ENSMUSG00000033419.17	Snap91	chr9	protein_coding	synaptosomal-associated protein 91
chr9	86680752;86680897	86680883;86686508	-	86680752	86686508	cassetteExon	0.5	100	100	ENSMUST00000239074.2	ENSMUSG00000033419.17	Snap91	chr9	protein_coding	synaptosomal-associated protein 91
chr9	86691601;86691709	86691704;86697483	-	86691601	86697483	cassetteExon	0.5	100	100	ENSMUST00000239074.2	ENSMUSG00000033419.17	Snap91	chr9	protein_coding	synaptosomal-associated protein 91
chr9	86663757	86665353	-	86663772	86665353	A3SS	0.5	50	50	ENSMUST00000239074.2	ENSMUSG00000033419.17	Snap91	chr9	protein_coding	synaptosomal-associated protein 91
chr9	86665457	86680591	-	86675517	86680591	A3SS&ES	0.33	50	50	ENSMUST00000239074.2	ENSMUSG00000033419.17	Snap91	chr9	protein_coding	synaptosomal-associated protein 91
chr9	86707130	86711267	-	86707130	86717162	A5SS	0.5	50	50	ENSMUST00000239074.2	ENSMUSG00000033419.17	Snap91	chr9	protein_coding	synaptosomal-associated protein 91
chr9	86761634	86762374	-	86761634	86762314	A5SS	0.33	50	50	ENSMUST00000239074.2	ENSMUSG00000033419.17	Snap91	chr9	protein_coding	synaptosomal-associated protein 91
chr9	86680752	86686508	-	86665487	86686508	A3SS	0.33	50	50	ENSMUST00000074501.12	ENSMUSG00000033419.17	Snap91	chr9	protein_coding	synaptosomal-associated protein 91
chr9	86680897	86686508	-	86665487	86686508	A3SS	0.33	50	50	ENSMUST00000074501.12	ENSMUSG00000033419.17	Snap91	chr9	protein_coding	synaptosomal-associated protein 91
chr9	86665487	86672109	-	86665487	86686508	A5SS	0.33	50	50	ENSMUST00000074501.12	ENSMUSG00000033419.17	Snap91	chr9	protein_coding	synaptosomal-associated protein 91
chr9	86665487	86673538	-	86665487	86686508	A5SS	0.33	50	50	ENSMUST00000074501.12	ENSMUSG00000033419.17	Snap91	chr9	protein_coding	synaptosomal-associated protein 91
chr9	86674789	86680591	-	86665457	86680591	A3SS	0.33	50	50	ENSMUST00000190089.7	ENSMUSG00000033419.17	Snap91	chr9	protein_coding	synaptosomal-associated protein 91
chr9	86680752	86686508	-	86680752	86680883	5pMXE	0.5	50	50	ENSMUST00000189004.2	ENSMUSG00000033419.17	Snap91	chr9	protein_coding	synaptosomal-associated protein 91
chr9	86761634	86762374	-	86761634	86762525	A5SS	0.33	50	50	ENSMUST00000167014.3	ENSMUSG00000033419.17	Snap91	chr9	protein_coding	synaptosomal-associated protein 91
chr9	86911657	86914114	+	86911657	86914433	A3SS	0.5	50	50	ENSMUST00000168529.9	ENSMUSG00000032872.17	Cyb5r4	chr9	protein_coding	cytochrome b5 reductase 4
chr9	86941504	86948740	+	86941504	86948702	A3SS	0.5	50	50	ENSMUST00000168529.9	ENSMUSG00000032872.17	Cyb5r4	chr9	protein_coding	cytochrome b5 reductase 4
chr9	86948866	86949193	+	86948866	86958881	A3SS	0.5	50	50	ENSMUST00000168529.9	ENSMUSG00000032872.17	Cyb5r4	chr9	protein_coding	cytochrome b5 reductase 4
chr9	87026450	87051578	+	87026450;87027210	87027030;87051578	ES	0.33	50	50	ENSMUST00000113149.8	ENSMUSG00000042761.15	Mrap2	chr9	protein_coding	melanocortin 2 receptor accessory protein 2
chr9	87026450;87026728	87026584;87051578	+	87026450;87027210	87027030;87051578	MXE	0.5	100	100	ENSMUST00000113149.8	ENSMUSG00000042761.15	Mrap2	chr9	protein_coding	melanocortin 2 receptor accessory protein 2
chr9	87026450;87026728	87026584;87051578	+	87026450	87051578	cassetteExon	0.5	100	100	ENSMUST00000049457.14	ENSMUSG00000042761.15	Mrap2	chr9	protein_coding	melanocortin 2 receptor accessory protein 2
chr9	87089108	87091932	-	87089108	87092850	A5SS	0.5	50	50	ENSMUST00000093802.6	ENSMUSG00000056919.10	Cep162	chr9	protein_coding	centrosomal protein 162
chr9	87611718	87612512	-	87611718	87612588	A5SS	0.5	50	50	ENSMUST00000034991.8	ENSMUSG00000032419.9	Tbx18	chr9	protein_coding	T-box18
chr9	88237828	88239866	+	88237828	88245489	A3SS	0.5	50	50	ENSMUST00000034992.8	ENSMUSG00000032420.9	Nt5e	chr9	protein_coding	5' nucleotidase, ecto
chr9	88289535	88295534	-	88289535;88292695	88292611;88295534	ES	0.5	50	50	ENSMUST00000239462.2	ENSMUSG00000032422.19	Snx14	chr9	protein_coding	sorting nexin 14
chr9	88305071	88336256	-	88305071	88320721	5pMXE	0.5	50	50	ENSMUST00000239462.2	ENSMUSG00000032422.19	Snx14	chr9	protein_coding	sorting nexin 14
chr9	88280424;88282802	88282776;88283973	-	88280424	88283973	cassetteExon	0.5	100	100	ENSMUST00000239462.2	ENSMUSG00000032422.19	Snx14	chr9	protein_coding	sorting nexin 14
chr9	88284321	88285318	-	88266063	88285318	A3SS	0.5	50	50	ENSMUST00000173011.9	ENSMUSG00000032422.19	Snx14	chr9	protein_coding	sorting nexin 14
chr9	88266063	88267773	-	88266063	88285318	A5SS	0.5	50	50	ENSMUST00000173011.9	ENSMUSG00000032422.19	Snx14	chr9	protein_coding	sorting nexin 14
chr9	88297768	88302304	-	88292695	88302304	A3SS	0.5	50	50	ENSMUST00000173039.9	ENSMUSG00000032422.19	Snx14	chr9	protein_coding	sorting nexin 14
chr9	88289535	88295534	-	88289535	88292611	A5SS&ES	0.5	50	50	ENSMUST00000173039.9	ENSMUSG00000032422.19	Snx14	chr9	protein_coding	sorting nexin 14
chr9	88292695	88295534	-	88292695	88302304	A5SS	0.5	50	50	ENSMUST00000173039.9	ENSMUSG00000032422.19	Snx14	chr9	protein_coding	sorting nexin 14
chr9	88289535;88292695	88292611;88302304	-	88289535;88297768	88295534;88302304	MXE	0.5	100	100	ENSMUST00000126405.3	ENSMUSG00000032422.19	Snx14	chr9	protein_coding	sorting nexin 14
chr9	88336348	88338416	-	88336345	88338416	A3SS	0.5	50	50	ENSMUST00000173131.8	ENSMUSG00000092541.8	Gm20537	chr9	protein_coding	predicted gene 20537
chr9	88361965	88364109	-	88361965;88362818	88362659;88364109	ES	0.5	50	50	ENSMUST00000069221.12	ENSMUSG00000032423.13	Syncrip	chr9	protein_coding	synaptotagmin binding, cytoplasmic RNA interacting protein
chr9	88344438	88345113	-	88344438	88345008	A5SS	0.33	50	50	ENSMUST00000069221.12	ENSMUSG00000032423.13	Syncrip	chr9	protein_coding	synaptotagmin binding, cytoplasmic RNA interacting protein
chr9	88359018	88359153	-	88359018	88359127	A5SS	0.5	50	50	ENSMUST00000069221.12	ENSMUSG00000032423.13	Syncrip	chr9	protein_coding	synaptotagmin binding, cytoplasmic RNA interacting protein
chr9	88362818	88363058	-	88362818	88364109	A5SS	0.5	50	50	ENSMUST00000069221.12	ENSMUSG00000032423.13	Syncrip	chr9	protein_coding	synaptotagmin binding, cytoplasmic RNA interacting protein
chr9	88361965	88364109	-	88361965	88362659	5pMXE	0.5	50	50	ENSMUST00000174688.8	ENSMUSG00000032423.13	Syncrip	chr9	protein_coding	synaptotagmin binding, cytoplasmic RNA interacting protein
chr9	88346836	88358842	-	88344438	88358842	A3SS	0.5	50	50	ENSMUST00000174688.8	ENSMUSG00000032423.13	Syncrip	chr9	protein_coding	synaptotagmin binding, cytoplasmic RNA interacting protein
chr9	88346836	88361624	-	88359240	88361624	A3SS&ES	0.5	50	50	ENSMUST00000174688.8	ENSMUSG00000032423.13	Syncrip	chr9	protein_coding	synaptotagmin binding, cytoplasmic RNA interacting protein
chr9	88344438	88345008	-	88344438	88358842	A5SS	0.33	50	50	ENSMUST00000174688.8	ENSMUSG00000032423.13	Syncrip	chr9	protein_coding	synaptotagmin binding, cytoplasmic RNA interacting protein
chr9	88344438	88345113	-	88344438	88358842	A5SS	0.33	50	50	ENSMUST00000174688.8	ENSMUSG00000032423.13	Syncrip	chr9	protein_coding	synaptotagmin binding, cytoplasmic RNA interacting protein
chr9	88346836;88359240	88358842;88361624	-	88346836	88361624	cassetteExon	0.5	100	100	ENSMUST00000174145.2	ENSMUSG00000032423.13	Syncrip	chr9	protein_coding	synaptotagmin binding, cytoplasmic RNA interacting protein
chr9	88403769	88404360	-	88403769;88404028	88403971;88404360	ES	0.5	50	50	ENSMUST00000239357.2	ENSMUSG00000097195.11	Snhg5	chr9	lncRNA	small nucleolar RNA host gene 5
chr9	88404028	88404537	-	88404028;88404434	88404360;88404537	ES	0.33	50	50	ENSMUST00000239357.2	ENSMUSG00000097195.11	Snhg5	chr9	lncRNA	small nucleolar RNA host gene 5
chr9	88403501	88403703	-	88379518	88403703	A3SS	0.5	50	50	ENSMUST00000239357.2	ENSMUSG00000097195.11	Snhg5	chr9	lncRNA	small nucleolar RNA host gene 5
chr9	88403501	88403971	-	88403769	88403971	A3SS&ES	0.5	50	50	ENSMUST00000239357.2	ENSMUSG00000097195.11	Snhg5	chr9	lncRNA	small nucleolar RNA host gene 5
chr9	88404434	88404904	-	88404434	88404537	A5SS	0.5	50	50	ENSMUST00000239357.2	ENSMUSG00000097195.11	Snhg5	chr9	lncRNA	small nucleolar RNA host gene 5
chr9	88403501	88403971	-	88403501;88403769	88403703;88403971	ES	0.5	50	50	ENSMUST00000182232.9	ENSMUSG00000097195.11	Snhg5	chr9	lncRNA	small nucleolar RNA host gene 5
chr9	88404434	88404904	-	88404434;88404639	88404537;88404904	ES	0.33	50	50	ENSMUST00000182232.9	ENSMUSG00000097195.11	Snhg5	chr9	lncRNA	small nucleolar RNA host gene 5
chr9	88404681	88404904	-	88404639	88404904	A3SS	0.33	50	50	ENSMUST00000182232.9	ENSMUSG00000097195.11	Snhg5	chr9	lncRNA	small nucleolar RNA host gene 5
chr9	88403769	88404360	-	88404028	88404360	A3SS	0.5	50	50	ENSMUST00000183045.3	ENSMUSG00000097195.11	Snhg5	chr9	lncRNA	small nucleolar RNA host gene 5
chr9	88403769	88404537	-	88404434	88404537	A3SS&ES	0.33	50	50	ENSMUST00000183045.3	ENSMUSG00000097195.11	Snhg5	chr9	lncRNA	small nucleolar RNA host gene 5
chr9	88403501	88403971	-	88403501	88403703	A5SS	0.5	50	50	ENSMUST00000183045.3	ENSMUSG00000097195.11	Snhg5	chr9	lncRNA	small nucleolar RNA host gene 5
chr9	88404434	88404904	-	88404639	88404904	A3SS	0.33	50	50	ENSMUST00000239212.2	ENSMUSG00000097195.11	Snhg5	chr9	lncRNA	small nucleolar RNA host gene 5
chr9	88403769	88404360	-	88403769	88403971	A5SS	0.33	50	50	ENSMUST00000239212.2	ENSMUSG00000097195.11	Snhg5	chr9	lncRNA	small nucleolar RNA host gene 5
chr9	88403769	88404537	-	88403769	88403971	A5SS	0.33	50	50	ENSMUST00000239212.2	ENSMUSG00000097195.11	Snhg5	chr9	lncRNA	small nucleolar RNA host gene 5
chr9	88403769	88404537	-	88403769;88404028	88403971;88404537	ES	0.33	50	50	ENSMUST00000239386.2	ENSMUSG00000097195.11	Snhg5	chr9	lncRNA	small nucleolar RNA host gene 5
chr9	88403769;88404434	88404360;88404537	-	88403769;88404028	88403971;88404537	MXE	0.5	100	100	ENSMUST00000239386.2	ENSMUSG00000097195.11	Snhg5	chr9	lncRNA	small nucleolar RNA host gene 5
chr9	88404028	88404537	-	88404028	88404360	A5SS	0.5	50	50	ENSMUST00000239184.2	ENSMUSG00000097195.11	Snhg5	chr9	lncRNA	small nucleolar RNA host gene 5
chr9	88403769	88404537	-	88403769;88404434	88404360;88404537	ES	0.33	50	50	ENSMUST00000182872.4	ENSMUSG00000097195.11	Snhg5	chr9	lncRNA	small nucleolar RNA host gene 5
chr9	88403769	88404537	-	88403769;88404434	88403971;88404537	ES	0.33	50	50	ENSMUST00000239227.2	ENSMUSG00000097195.11	Snhg5	chr9	lncRNA	small nucleolar RNA host gene 5
chr9	88404434	88404904	-	88404434;88404681	88404537;88404904	ES	0.33	50	50	ENSMUST00000239227.2	ENSMUSG00000097195.11	Snhg5	chr9	lncRNA	small nucleolar RNA host gene 5
chr9	88404028	88404537	-	88404434	88404537	A3SS	0.33	50	50	ENSMUST00000239227.2	ENSMUSG00000097195.11	Snhg5	chr9	lncRNA	small nucleolar RNA host gene 5
chr9	88403769;88404434	88404360;88404904	-	88403769;88404681	88403971;88404904	MXE	0.5	100	100	ENSMUST00000239327.2	ENSMUSG00000097195.11	Snhg5	chr9	lncRNA	small nucleolar RNA host gene 5
chr9	88404028;88404434	88404360;88404904	-	88404028;88404681	88404537;88404904	MXE	0.5	100	100	ENSMUST00000239327.2	ENSMUSG00000097195.11	Snhg5	chr9	lncRNA	small nucleolar RNA host gene 5
chr9	88403501;88404028	88403971;88404537	-	88403501;88403769	88403703;88404537	MXE	0.5	100	100	ENSMUST00000239285.2	ENSMUSG00000097195.11	Snhg5	chr9	lncRNA	small nucleolar RNA host gene 5
chr9	88403501;88404434	88403971;88404537	-	88403501;88403769	88403703;88404537	MXE	0.5	100	100	ENSMUST00000239285.2	ENSMUSG00000097195.11	Snhg5	chr9	lncRNA	small nucleolar RNA host gene 5
chr9	88403501;88404028	88403971;88404360	-	88403501;88403769	88403703;88404360	MXE	0.5	100	100	ENSMUST00000180563.10	ENSMUSG00000097195.11	Snhg5	chr9	lncRNA	small nucleolar RNA host gene 5
chr9	88403501;88404028	88403971;88404537	-	88403501;88404434	88403703;88404537	MXE	0.5	100	100	ENSMUST00000180563.10	ENSMUSG00000097195.11	Snhg5	chr9	lncRNA	small nucleolar RNA host gene 5
chr9	88403769;88404639	88404537;88404904	-	88403769;88404434	88403971;88404904	MXE	0.5	100	100	ENSMUST00000239274.2	ENSMUSG00000097195.11	Snhg5	chr9	lncRNA	small nucleolar RNA host gene 5
chr9	88403769;88404681	88404537;88404904	-	88403769;88404434	88403971;88404904	MXE	0.5	100	100	ENSMUST00000239274.2	ENSMUSG00000097195.11	Snhg5	chr9	lncRNA	small nucleolar RNA host gene 5
chr9	88430561	88436429	+	88430561;88434914	88434769;88436429	ES	0.5	50	50	ENSMUST00000162827.8	ENSMUSG00000032425.16	Zfp949	chr9	protein_coding	zinc finger protein 949
chr9	88430561	88434715	+	88430561	88434769	A3SS	0.33	50	50	ENSMUST00000162827.8	ENSMUSG00000032425.16	Zfp949	chr9	protein_coding	zinc finger protein 949
chr9	88430353	88434769	+	88430561	88434769	A5SS	0.5	50	50	ENSMUST00000162827.8	ENSMUSG00000032425.16	Zfp949	chr9	protein_coding	zinc finger protein 949
chr9	88430561	88436429	+	88434914	88436429	A5SS&ES	0.5	50	50	ENSMUST00000160652.8	ENSMUSG00000032425.16	Zfp949	chr9	protein_coding	zinc finger protein 949
chr9	88430561	88436429	+	88430561;88434914	88434715;88436429	ES	0.5	50	50	ENSMUST00000161232.2	ENSMUSG00000032425.16	Zfp949	chr9	protein_coding	zinc finger protein 949
chr9	88463243	88464087	+	88463243	88466188	A3SS	0.5	50	50	ENSMUST00000215498.2	ENSMUSG00000090693.5	Trim43a	chr9	protein_coding	tripartite motif-containing 43A
chr9	88465181	88466188	+	88463243	88466188	A5SS	0.5	50	50	ENSMUST00000215498.2	ENSMUSG00000090693.5	Trim43a	chr9	protein_coding	tripartite motif-containing 43A
chr9	88481152	88481517	-	88481152	88481269	5pMXE	0.5	50	50	ENSMUST00000180723.8	ENSMUSG00000097073.8	9430037G07Rik	chr9	lncRNA	RIKEN cDNA 9430037G07 gene
chr9	88597802	88602202	-	88597802	88601712	5pMXE	0.33	50	50	ENSMUST00000113110.5	ENSMUSG00000079427.11	Mthfsl	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase-like
chr9	88586189	88597541	-	88571038	88597541	A3SS	0.5	50	50	ENSMUST00000113110.5	ENSMUSG00000079427.11	Mthfsl	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase-like
chr9	88571038	88601542	-	88571038	88597541	A5SS&ES	0.5	50	50	ENSMUST00000113110.5	ENSMUSG00000079427.11	Mthfsl	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase-like
chr9	88597802	88598547	-	88597802	88601712	A5SS	0.33	50	50	ENSMUST00000113110.5	ENSMUSG00000079427.11	Mthfsl	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase-like
chr9	88586189	88601542	-	88571038	88601542	A3SS	0.33	50	50	ENSMUST00000186721.2	ENSMUSG00000079427.11	Mthfsl	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase-like
chr9	88598616	88601542	-	88571038	88601542	A3SS	0.33	50	50	ENSMUST00000186721.2	ENSMUSG00000079427.11	Mthfsl	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase-like
chr9	88586189	88601542	-	88598616	88601542	A3SS&ES	0.33	50	50	ENSMUST00000186863.7	ENSMUSG00000079427.11	Mthfsl	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase-like
chr9	88586189	88597541	-	88586189	88601542	A5SS	0.5	50	50	ENSMUST00000190027.2	ENSMUSG00000079427.11	Mthfsl	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase-like
chr9	88597802	88598547	-	88597802	88602202	A5SS	0.33	50	50	ENSMUST00000191235.2	ENSMUSG00000079427.11	Mthfsl	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase-like
chr9	88723982	88724990	+	88723982	88724987	A3SS	0.5	50	50	ENSMUST00000163255.9	ENSMUSG00000067399.11	Trim43c	chr9	protein_coding	tripartite motif-containing 43C
chr9	88726319	88739867	-	88722779	88739867	A3SS	0.33	50	50	ENSMUST00000188156.7	ENSMUSG00000097177.9	9330159M07Rik	chr9	lncRNA	RIKEN cDNA 9330159M07 gene
chr9	88739636	88739867	-	88722779	88739867	A3SS	0.33	50	50	ENSMUST00000188156.7	ENSMUSG00000097177.9	9330159M07Rik	chr9	lncRNA	RIKEN cDNA 9330159M07 gene
chr9	88740497	88740756	-	88740497	88740862	A5SS	0.5	50	50	ENSMUST00000188156.7	ENSMUSG00000097177.9	9330159M07Rik	chr9	lncRNA	RIKEN cDNA 9330159M07 gene
chr9	88739636	88739867	-	88726319	88739867	A3SS	0.33	50	50	ENSMUST00000180712.8	ENSMUSG00000097177.9	9330159M07Rik	chr9	lncRNA	RIKEN cDNA 9330159M07 gene
chr9	88971644	88972646	-	88971647	88972646	A3SS	0.5	50	50	ENSMUST00000167113.8	ENSMUSG00000079162.9	Trim43b	chr9	protein_coding	tripartite motif-containing 43B
chr9	89081832	89097262	+	89081832	89089635	3pMXE	0.5	50	50	ENSMUST00000068569.5	ENSMUSG00000089929.2	Bcl2a1b	chr9	protein_coding	B cell leukemia/lymphoma 2 related protein A1b
chr9	89092874	89097262	+	89081832	89097262	A5SS	0.16	50	50	ENSMUST00000138109.2	ENSMUSG00000100838.2	Gm29094	chr9	protein_coding	predicted gene 29094
chr9	89093364	89097262	+	89081832	89097262	A5SS	0.16	50	50	ENSMUST00000138109.2	ENSMUSG00000100838.2	Gm29094	chr9	protein_coding	predicted gene 29094
chr9	89093534	89097262	+	89081832	89097262	A5SS	0.16	50	50	ENSMUST00000138109.2	ENSMUSG00000100838.2	Gm29094	chr9	protein_coding	predicted gene 29094
chr9	89095309	89097262	+	89081832	89097262	A5SS	0.16	50	50	ENSMUST00000138109.2	ENSMUSG00000100838.2	Gm29094	chr9	protein_coding	predicted gene 29094
chr9	89096534	89097262	+	89081832	89097262	A5SS	0.16	50	50	ENSMUST00000138109.2	ENSMUSG00000100838.2	Gm29094	chr9	protein_coding	predicted gene 29094
chr9	89097523	89121895	+	89097523;89108440	89108224;89121895	ES	0.25	50	50	ENSMUST00000127438.8	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89097523	89117725	+	89097523	89108224	A3SS&ES	0.33	50	50	ENSMUST00000127438.8	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89108440	89117725	+	89108440	89121895	A3SS	0.5	50	50	ENSMUST00000127438.8	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89093364	89097262	+	89092874	89097262	A5SS	0.16	50	50	ENSMUST00000127438.8	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89093534	89097262	+	89092874	89097262	A5SS	0.16	50	50	ENSMUST00000127438.8	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89093534	89108224	+	89097523	89108224	A5SS&ES	0.5	50	50	ENSMUST00000127438.8	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89093534	89121895	+	89108440	89121895	A5SS&ES	0.25	50	50	ENSMUST00000127438.8	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89095309	89097262	+	89092874	89097262	A5SS	0.16	50	50	ENSMUST00000127438.8	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89096534	89097262	+	89092874	89097262	A5SS	0.16	50	50	ENSMUST00000127438.8	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89100570	89121895	+	89108440	89121895	A5SS&ES	0.25	50	50	ENSMUST00000127438.8	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89097523	89121895	+	89097523	89108224	3pMXE	0.33	50	50	ENSMUST00000118870.8	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89093534	89097262	+	89093364	89097262	A5SS	0.16	50	50	ENSMUST00000118870.8	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89095309	89097262	+	89093364	89097262	A5SS	0.16	50	50	ENSMUST00000118870.8	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89096534	89097262	+	89093364	89097262	A5SS	0.16	50	50	ENSMUST00000118870.8	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89097523	89117725	+	89097523	89121895	A3SS	0.33	50	50	ENSMUST00000085256.8	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89093534	89121895	+	89097523	89121895	A5SS&ES	0.25	50	50	ENSMUST00000085256.8	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89100570	89121895	+	89097523	89121895	A5SS	0.25	50	50	ENSMUST00000085256.8	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89093534	89097262	+	89093534;89096534	89096465;89097262	ES	0.33	50	50	ENSMUST00000117314.8	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89093534;89108440	89108224;89121895	+	89093534;89097523	89096465;89121895	MXE	0.5	100	100	ENSMUST00000117314.8	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89093534	89094587	+	89093534	89096465	A3SS	0.2	50	50	ENSMUST00000117314.8	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89095309	89097262	+	89096534	89097262	A5SS&ES	0.33	50	50	ENSMUST00000117314.8	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89093534	89108224	+	89093534;89097523	89097262;89108224	ES	0.5	50	50	ENSMUST00000118887.8	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89093534	89094587	+	89093534	89097262	A3SS	0.25	50	50	ENSMUST00000118887.8	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89095309	89097262	+	89093534	89097262	A5SS	0.16	50	50	ENSMUST00000118887.8	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89093534	89214809	+	89093534	89121895	3pMXE	0.16	50	50	ENSMUST00000144930.2	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89093534;89097523	89097262;89121895	+	89093534	89121895	cassetteExon	0.5	100	100	ENSMUST00000144930.2	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89093534;89108440	89108224;89121895	+	89093534	89121895	cassetteExon	0.5	100	100	ENSMUST00000144930.2	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89093534	89094587	+	89093534	89121895	A3SS	0.16	50	50	ENSMUST00000144930.2	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89093534	89096465	+	89093534	89121895	A3SS	0.16	50	50	ENSMUST00000144930.2	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89100570	89121895	+	89093534	89121895	A5SS	0.25	50	50	ENSMUST00000144930.2	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89117797	89117975	+	89117797	89117924	3pMXE	0.5	50	50	ENSMUST00000149688.3	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89093534;89097523	89097262;89117725	+	89093534;89108440	89108224;89117725	MXE	0.5	100	100	ENSMUST00000149688.3	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89093534	89094587	+	89093534	89108224	A3SS	0.25	50	50	ENSMUST00000149688.3	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89093534	89096465	+	89093534	89108224	A3SS	0.25	50	50	ENSMUST00000149688.3	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89093534	89094587	+	89093534	89214809	A3SS	0.16	50	50	ENSMUST00000186009.2	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89093534	89096465	+	89093534	89214809	A3SS	0.16	50	50	ENSMUST00000186009.2	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89093534	89097262	+	89093534	89214809	A3SS	0.16	50	50	ENSMUST00000186009.2	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89093534	89108224	+	89093534	89214809	A3SS	0.16	50	50	ENSMUST00000186009.2	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89214936	89216321	+	89214936	89244733	A3SS	0.5	50	50	ENSMUST00000186009.2	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89093534	89097262	+	89093534;89095309	89094587;89097262	ES	0.33	50	50	ENSMUST00000187362.2	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89093534;89096534	89096465;89097262	+	89093534;89095309	89094587;89097262	MXE	0.5	100	100	ENSMUST00000187362.2	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89093534;89108440	89108224;89121895	+	89093534;89097523	89094587;89121895	MXE	0.5	100	100	ENSMUST00000187362.2	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89097523;89108440	89108224;89117725	+	89097523	89117725	cassetteExon	0.5	100	100	ENSMUST00000185894.2	ENSMUSG00000066442.18	Mthfs	chr9	protein_coding	5, 10-methenyltetrahydrofolate synthetase
chr9	89473353;89478128	89478063;89478489	-	89473353	89478489	cassetteExon	0.5	100	100	ENSMUST00000044491.13	ENSMUSG00000039313.15	Minar1	chr9	protein_coding	membrane integral NOTCH2 associated receptor 1
chr9	89612383	89620136	-	89612383	89620128	A5SS	0.5	50	50	ENSMUST00000060700.4	ENSMUSG00000047606.5	Ankrd34c	chr9	protein_coding	ankyrin repeat domain 34C
chr9	89715747	89720201	+	89715747	89738457	A3SS	0.5	50	50	ENSMUST00000183387.8	ENSMUSG00000098627.8	4930524O08Rik	chr9	lncRNA	RIKEN cDNA 4930524O08 gene
chr9	89709391	89712445	+	89709290	89712445	A5SS	0.33	50	50	ENSMUST00000183387.8	ENSMUSG00000098627.8	4930524O08Rik	chr9	lncRNA	RIKEN cDNA 4930524O08 gene
chr9	89710558	89712445	+	89709290	89712445	A5SS	0.33	50	50	ENSMUST00000183387.8	ENSMUSG00000098627.8	4930524O08Rik	chr9	lncRNA	RIKEN cDNA 4930524O08 gene
chr9	89709391	89712445	+	89710558	89712445	A5SS	0.33	50	50	ENSMUST00000184444.8	ENSMUSG00000098627.8	4930524O08Rik	chr9	lncRNA	RIKEN cDNA 4930524O08 gene
chr9	89792326	89806114	+	89792326	89793501	3pMXE	0.5	50	50	ENSMUST00000189545.2	ENSMUSG00000032356.13	Rasgrf1	chr9	protein_coding	RAS protein-specific guanine nucleotide-releasing factor 1
chr9	89942563	89944770	+	89942563;89943677	89943572;89944770	ES	0.33	50	50	ENSMUST00000132718.8	ENSMUSG00000032359.15	Ctsh	chr9	protein_coding	cathepsin H
chr9	89944840	89946560	+	89944840;89946310	89946206;89946560	ES	0.5	50	50	ENSMUST00000132718.8	ENSMUSG00000032359.15	Ctsh	chr9	protein_coding	cathepsin H
chr9	89942563;89943529	89943448;89944770	+	89942563;89943677	89943572;89944770	MXE	0.5	100	100	ENSMUST00000132718.8	ENSMUSG00000032359.15	Ctsh	chr9	protein_coding	cathepsin H
chr9	89942563	89943555	+	89942563	89943572	A3SS	0.25	50	50	ENSMUST00000132718.8	ENSMUSG00000032359.15	Ctsh	chr9	protein_coding	cathepsin H
chr9	89950526;89951033	89950963;89953872	+	89950526	89953872	cassetteExon	0.5	100	100	ENSMUST00000034915.15	ENSMUSG00000032359.15	Ctsh	chr9	protein_coding	cathepsin H
chr9	89942563	89944770	+	89942563;89943529	89943448;89944770	ES	0.33	50	50	ENSMUST00000143172.8	ENSMUSG00000032359.15	Ctsh	chr9	protein_coding	cathepsin H
chr9	89944840	89946560	+	89944840	89946206	3pMXE	0.5	50	50	ENSMUST00000143172.8	ENSMUSG00000032359.15	Ctsh	chr9	protein_coding	cathepsin H
chr9	89942563;89943677	89943555;89944770	+	89942563;89943529	89943448;89944770	MXE	0.5	100	100	ENSMUST00000143172.8	ENSMUSG00000032359.15	Ctsh	chr9	protein_coding	cathepsin H
chr9	89942563;89943677	89943448;89944770	+	89942563	89944770	cassetteExon	0.5	100	100	ENSMUST00000123320.8	ENSMUSG00000032359.15	Ctsh	chr9	protein_coding	cathepsin H
chr9	89942563;89943677	89943555;89944770	+	89942563	89944770	cassetteExon	0.5	100	100	ENSMUST00000123320.8	ENSMUSG00000032359.15	Ctsh	chr9	protein_coding	cathepsin H
chr9	89942563	89944770	+	89942563	89943555	3pMXE	0.25	50	50	ENSMUST00000187437.2	ENSMUSG00000032359.15	Ctsh	chr9	protein_coding	cathepsin H
chr9	89942563	89943448	+	89942563	89943555	A3SS	0.25	50	50	ENSMUST00000187437.2	ENSMUSG00000032359.15	Ctsh	chr9	protein_coding	cathepsin H
chr9	89979942	89984353	-	89979942;89982576	89982496;89984353	ES	0.5	50	50	ENSMUST00000085248.12	ENSMUSG00000062270.15	Morf4l1	chr9	protein_coding	mortality factor 4 like 1
chr9	89984439	89989288	-	89984439;89985824	89985708;89989288	ES	0.33	50	50	ENSMUST00000085248.12	ENSMUSG00000062270.15	Morf4l1	chr9	protein_coding	mortality factor 4 like 1
chr9	89985821	89989288	-	89985824	89989288	A3SS	0.33	50	50	ENSMUST00000085248.12	ENSMUSG00000062270.15	Morf4l1	chr9	protein_coding	mortality factor 4 like 1
chr9	89984439	89996267	-	89984439	89985708	A5SS&ES	0.25	50	50	ENSMUST00000085248.12	ENSMUSG00000062270.15	Morf4l1	chr9	protein_coding	mortality factor 4 like 1
chr9	89992225	89996267	-	89992225	89996589	A5SS	0.5	50	50	ENSMUST00000085248.12	ENSMUSG00000062270.15	Morf4l1	chr9	protein_coding	mortality factor 4 like 1
chr9	89984439;89985821	89985708;89989288	-	89984439	89989288	cassetteExon	0.5	100	100	ENSMUST00000169860.8	ENSMUSG00000062270.15	Morf4l1	chr9	protein_coding	mortality factor 4 like 1
chr9	89984439	89996267	-	89984439	89989288	A5SS&ES	0.25	50	50	ENSMUST00000169860.8	ENSMUSG00000062270.15	Morf4l1	chr9	protein_coding	mortality factor 4 like 1
chr9	89984439	89996589	-	89984439	89996267	5pMXE	0.25	50	50	ENSMUST00000187771.8	ENSMUSG00000062270.15	Morf4l1	chr9	protein_coding	mortality factor 4 like 1
chr9	89992225	89996267	-	89984439	89996267	A3SS	0.5	50	50	ENSMUST00000187771.8	ENSMUSG00000062270.15	Morf4l1	chr9	protein_coding	mortality factor 4 like 1
chr9	89979942	89984353	-	89982576	89984353	A3SS	0.5	50	50	ENSMUST00000190377.7	ENSMUSG00000062270.15	Morf4l1	chr9	protein_coding	mortality factor 4 like 1
chr9	89992225	89996589	-	89984439	89996589	A3SS	0.5	50	50	ENSMUST00000190345.2	ENSMUSG00000062270.15	Morf4l1	chr9	protein_coding	mortality factor 4 like 1
chr9	89984439	89985708	-	89984439	89996589	A5SS	0.25	50	50	ENSMUST00000190345.2	ENSMUSG00000062270.15	Morf4l1	chr9	protein_coding	mortality factor 4 like 1
chr9	89984439	89989288	-	89984439	89996589	A5SS	0.25	50	50	ENSMUST00000190345.2	ENSMUSG00000062270.15	Morf4l1	chr9	protein_coding	mortality factor 4 like 1
chr9	90068605	90070322	+	90068605;90069120	90068975;90070322	ES	0.5	50	50	ENSMUST00000113059.8	ENSMUSG00000032363.16	Adamts7	chr9	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7
chr9	90073553	90074434	+	90073553;90074015	90073889;90074434	ES	0.5	50	50	ENSMUST00000113059.8	ENSMUSG00000032363.16	Adamts7	chr9	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7
chr9	90079215	90089770	+	90079215	90081767	3pMXE	0.5	50	50	ENSMUST00000113059.8	ENSMUSG00000032363.16	Adamts7	chr9	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7
chr9	90074647	90075078	+	90074647	90074952	A3SS	0.5	50	50	ENSMUST00000113059.8	ENSMUSG00000032363.16	Adamts7	chr9	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7
chr9	90131997	90137903	-	90131997	90152405	A5SS	0.5	50	50	ENSMUST00000041767.14	ENSMUSG00000037410.14	Tbc1d2b	chr9	protein_coding	TBC1 domain family, member 2B
chr9	91244675	91245063	-	91244675	91246089	A5SS	0.5	50	50	ENSMUST00000034927.13	ENSMUSG00000032368.15	Zic1	chr9	protein_coding	zinc finger protein of the cerebellum 1
chr9	91250947	91254661	+	91244571	91254661	A5SS	0.14	50	50	ENSMUST00000173342.8	ENSMUSG00000036972.15	Zic4	chr9	protein_coding	zinc finger protein of the cerebellum 4
chr9	91251279	91254661	+	91244571	91254661	A5SS	0.14	50	50	ENSMUST00000173342.8	ENSMUSG00000036972.15	Zic4	chr9	protein_coding	zinc finger protein of the cerebellum 4
chr9	91252879	91254661	+	91244571	91254661	A5SS	0.14	50	50	ENSMUST00000173342.8	ENSMUSG00000036972.15	Zic4	chr9	protein_coding	zinc finger protein of the cerebellum 4
chr9	91253162	91254661	+	91244571	91254661	A5SS	0.14	50	50	ENSMUST00000173342.8	ENSMUSG00000036972.15	Zic4	chr9	protein_coding	zinc finger protein of the cerebellum 4
chr9	91253586	91254661	+	91244571	91254661	A5SS	0.14	50	50	ENSMUST00000173342.8	ENSMUSG00000036972.15	Zic4	chr9	protein_coding	zinc finger protein of the cerebellum 4
chr9	91254102	91254661	+	91244571	91254661	A5SS	0.14	50	50	ENSMUST00000173342.8	ENSMUSG00000036972.15	Zic4	chr9	protein_coding	zinc finger protein of the cerebellum 4
chr9	91250947	91254661	+	91250947	91251027	3pMXE	0.5	50	50	ENSMUST00000172978.2	ENSMUSG00000036972.15	Zic4	chr9	protein_coding	zinc finger protein of the cerebellum 4
chr9	91250947;91251279	91251027;91254661	+	91250947	91254661	cassetteExon	0.5	100	100	ENSMUST00000173054.8	ENSMUSG00000036972.15	Zic4	chr9	protein_coding	zinc finger protein of the cerebellum 4
chr9	91252879	91254661	+	91250947	91254661	A5SS	0.14	50	50	ENSMUST00000173054.8	ENSMUSG00000036972.15	Zic4	chr9	protein_coding	zinc finger protein of the cerebellum 4
chr9	91253162	91254661	+	91250947	91254661	A5SS	0.14	50	50	ENSMUST00000173054.8	ENSMUSG00000036972.15	Zic4	chr9	protein_coding	zinc finger protein of the cerebellum 4
chr9	91253586	91254661	+	91250947	91254661	A5SS	0.14	50	50	ENSMUST00000173054.8	ENSMUSG00000036972.15	Zic4	chr9	protein_coding	zinc finger protein of the cerebellum 4
chr9	91254102	91254661	+	91250947	91254661	A5SS	0.14	50	50	ENSMUST00000173054.8	ENSMUSG00000036972.15	Zic4	chr9	protein_coding	zinc finger protein of the cerebellum 4
chr9	91250947	91254661	+	91251279	91254661	A5SS	0.14	50	50	ENSMUST00000174611.8	ENSMUSG00000036972.15	Zic4	chr9	protein_coding	zinc finger protein of the cerebellum 4
chr9	91252879	91254661	+	91251279	91254661	A5SS	0.14	50	50	ENSMUST00000174611.8	ENSMUSG00000036972.15	Zic4	chr9	protein_coding	zinc finger protein of the cerebellum 4
chr9	91253162	91254661	+	91251279	91254661	A5SS	0.14	50	50	ENSMUST00000174611.8	ENSMUSG00000036972.15	Zic4	chr9	protein_coding	zinc finger protein of the cerebellum 4
chr9	91253586	91254661	+	91251279	91254661	A5SS	0.14	50	50	ENSMUST00000174611.8	ENSMUSG00000036972.15	Zic4	chr9	protein_coding	zinc finger protein of the cerebellum 4
chr9	91254102	91254661	+	91251279	91254661	A5SS	0.14	50	50	ENSMUST00000174611.8	ENSMUSG00000036972.15	Zic4	chr9	protein_coding	zinc finger protein of the cerebellum 4
chr9	91264536	91266067	+	91261455	91266067	A5SS	0.5	50	50	ENSMUST00000172646.8	ENSMUSG00000036972.15	Zic4	chr9	protein_coding	zinc finger protein of the cerebellum 4
chr9	91253162	91254661	+	91252879	91254661	A5SS	0.14	50	50	ENSMUST00000170572.2	ENSMUSG00000036972.15	Zic4	chr9	protein_coding	zinc finger protein of the cerebellum 4
chr9	91253586	91254661	+	91252879	91254661	A5SS	0.14	50	50	ENSMUST00000170572.2	ENSMUSG00000036972.15	Zic4	chr9	protein_coding	zinc finger protein of the cerebellum 4
chr9	91254102	91254661	+	91252879	91254661	A5SS	0.14	50	50	ENSMUST00000170572.2	ENSMUSG00000036972.15	Zic4	chr9	protein_coding	zinc finger protein of the cerebellum 4
chr9	91253586	91254661	+	91253162	91254661	A5SS	0.14	50	50	ENSMUST00000174212.8	ENSMUSG00000036972.15	Zic4	chr9	protein_coding	zinc finger protein of the cerebellum 4
chr9	91254102	91254661	+	91253162	91254661	A5SS	0.14	50	50	ENSMUST00000174212.8	ENSMUSG00000036972.15	Zic4	chr9	protein_coding	zinc finger protein of the cerebellum 4
chr9	91253586;91254102	91253869;91254661	+	91253586	91254661	cassetteExon	0.5	100	100	ENSMUST00000173933.8	ENSMUSG00000036972.15	Zic4	chr9	protein_coding	zinc finger protein of the cerebellum 4
chr9	92132477	92140101	+	92132413	92140101	A5SS	0.5	50	50	ENSMUST00000093801.10	ENSMUSG00000032369.14	Plscr1	chr9	protein_coding	phospholipid scramblase 1
chr9	92158066	92163294	+	92158066	92164165	A3SS	0.5	50	50	ENSMUST00000034932.14	ENSMUSG00000032372.15	Plscr2	chr9	protein_coding	phospholipid scramblase 2
chr9	92158071	92164165	+	92158066	92164165	A5SS	0.33	50	50	ENSMUST00000034932.14	ENSMUSG00000032372.15	Plscr2	chr9	protein_coding	phospholipid scramblase 2
chr9	92163836	92164165	+	92158066	92164165	A5SS	0.33	50	50	ENSMUST00000034932.14	ENSMUSG00000032372.15	Plscr2	chr9	protein_coding	phospholipid scramblase 2
chr9	92163836	92164165	+	92158071	92164165	A5SS	0.33	50	50	ENSMUST00000180154.8	ENSMUSG00000032372.15	Plscr2	chr9	protein_coding	phospholipid scramblase 2
chr9	92158066	92164165	+	92158066;92163836	92163294;92164165	ES	0.33	50	50	ENSMUST00000126911.2	ENSMUSG00000032372.15	Plscr2	chr9	protein_coding	phospholipid scramblase 2
chr9	92208543	92225504	+	92208543	92208628	3pMXE	0.5	50	50	ENSMUST00000126606.8	ENSMUSG00000074139.9	1700057G04Rik	chr9	protein_coding	RIKEN cDNA 1700057G04 gene
chr9	92191485	92225504	+	92191485;92208543	92208435;92225504	ES	0.5	50	50	ENSMUST00000150594.8	ENSMUSG00000074139.9	1700057G04Rik	chr9	protein_coding	RIKEN cDNA 1700057G04 gene
chr9	92225736	92232979	+	92225736;92229897	92229855;92232979	ES	0.5	50	50	ENSMUST00000098477.8	ENSMUSG00000074139.9	1700057G04Rik	chr9	protein_coding	RIKEN cDNA 1700057G04 gene
chr9	92225736;92228320	92228187;92229855	+	92225736	92229855	cassetteExon	0.5	100	100	ENSMUST00000098477.8	ENSMUSG00000074139.9	1700057G04Rik	chr9	protein_coding	RIKEN cDNA 1700057G04 gene
chr9	92234749;92235658	92235520;92236598	+	92234749	92236598	cassetteExon	0.5	100	100	ENSMUST00000098477.8	ENSMUSG00000074139.9	1700057G04Rik	chr9	protein_coding	RIKEN cDNA 1700057G04 gene
chr9	92225736	92228187	+	92225736	92232979	A3SS	0.33	50	50	ENSMUST00000185580.7	ENSMUSG00000074139.9	1700057G04Rik	chr9	protein_coding	RIKEN cDNA 1700057G04 gene
chr9	92482935;92484100	92484038;92485001	+	92482935	92485001	cassetteExon	0.5	100	100	ENSMUST00000070522.14	ENSMUSG00000032374.15	Plod2	chr9	protein_coding	procollagen lysine, 2-oxoglutarate 5-dioxygenase 2
chr9	92601131	92655497	+	92601131	92631165	3pMXE	0.5	50	50	ENSMUST00000189773.2	ENSMUSG00000101734.2	4933400C23Rik	chr9	lncRNA	RIKEN cDNA 4933400C23 gene
chr9	92862906	92885858	-	92862906	92872721	5pMXE	0.5	50	50	ENSMUST00000185830.7	ENSMUSG00000100294.7	1700034K08Rik	chr9	lncRNA	RIKEN cDNA 1700034K08 gene
chr9	92883772	92885858	-	92862906	92885858	A3SS	0.5	50	50	ENSMUST00000188082.7	ENSMUSG00000100294.7	1700034K08Rik	chr9	lncRNA	RIKEN cDNA 1700034K08 gene
chr9	92885989	92887737	-	92885956	92887737	A3SS	0.5	50	50	ENSMUST00000188082.7	ENSMUSG00000100294.7	1700034K08Rik	chr9	lncRNA	RIKEN cDNA 1700034K08 gene
chr9	94595024	94600465	+	94595024	94691980	A3SS	0.5	50	50	ENSMUST00000033463.10	ENSMUSG00000031129.10	Slc9a9	chr9	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 9
chr9	95004110	95005064	+	94937618	95005064	A5SS	0.5	50	50	ENSMUST00000033463.10	ENSMUSG00000031129.10	Slc9a9	chr9	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 9
chr9	95367718	95371753	-	95367718;95370842	95370799;95371753	ES	0.5	50	50	ENSMUST00000079659.12	ENSMUSG00000032407.15	U2surp	chr9	protein_coding	U2 snRNP-associated SURP domain containing
chr9	95377986	95384593	-	95377986;95382872	95382741;95384593	ES	0.33	50	50	ENSMUST00000079659.12	ENSMUSG00000032407.15	U2surp	chr9	protein_coding	U2 snRNP-associated SURP domain containing
chr9	95382926	95384593	-	95382872	95384593	A3SS	0.33	50	50	ENSMUST00000079659.12	ENSMUSG00000032407.15	U2surp	chr9	protein_coding	U2 snRNP-associated SURP domain containing
chr9	95373226	95373321	-	95373226	95373318	A5SS	0.5	50	50	ENSMUST00000079659.12	ENSMUSG00000032407.15	U2surp	chr9	protein_coding	U2 snRNP-associated SURP domain containing
chr9	95377986	95393870	-	95377986;95384637	95384593;95393870	ES	0.5	50	50	ENSMUST00000078374.13	ENSMUSG00000032407.15	U2surp	chr9	protein_coding	U2 snRNP-associated SURP domain containing
chr9	95377986;95382926	95382741;95384593	-	95377986	95384593	cassetteExon	0.5	100	100	ENSMUST00000078374.13	ENSMUSG00000032407.15	U2surp	chr9	protein_coding	U2 snRNP-associated SURP domain containing
chr9	95377986	95382741	-	95377986	95393870	A5SS	0.33	50	50	ENSMUST00000190019.2	ENSMUSG00000032407.15	U2surp	chr9	protein_coding	U2 snRNP-associated SURP domain containing
chr9	95377986	95393870	-	95384637	95393870	3pMXE	0.5	50	50	ENSMUST00000186076.2	ENSMUSG00000032407.15	U2surp	chr9	protein_coding	U2 snRNP-associated SURP domain containing
chr9	95439578	95440477	+	95436686	95440477	A5SS	0.5	50	50	ENSMUST00000213295.2	ENSMUSG00000110827.2	Gm32281	chr9	lncRNA	predicted gene, 32281
chr9	95562545	95563586	+	95560522	95563586	A5SS	0.5	50	50	ENSMUST00000015498.9	ENSMUSG00000015354.9	Pcolce2	chr9	protein_coding	procollagen C-endopeptidase enhancer 2
chr9	95614262	95625250	-	95614262;95618974	95618873;95625250	ES	0.5	50	50	ENSMUST00000189137.7	ENSMUSG00000032839.14	Trpc1	chr9	protein_coding	transient receptor potential cation channel, subfamily C, member 1
chr9	95618974	95631721	-	95618974;95625404	95625250;95631721	ES	0.33	50	50	ENSMUST00000189137.7	ENSMUSG00000032839.14	Trpc1	chr9	protein_coding	transient receptor potential cation channel, subfamily C, member 1
chr9	95608588	95614060	-	95608609	95614060	A3SS	0.5	50	50	ENSMUST00000189137.7	ENSMUSG00000032839.14	Trpc1	chr9	protein_coding	transient receptor potential cation channel, subfamily C, member 1
chr9	95614262	95631721	-	95614262;95625404	95625250;95631721	ES	0.33	50	50	ENSMUST00000053785.10	ENSMUSG00000032839.14	Trpc1	chr9	protein_coding	transient receptor potential cation channel, subfamily C, member 1
chr9	95614262;95618974	95618873;95631721	-	95614262;95625404	95625250;95631721	MXE	0.5	100	100	ENSMUST00000053785.10	ENSMUSG00000032839.14	Trpc1	chr9	protein_coding	transient receptor potential cation channel, subfamily C, member 1
chr9	95614262;95618974	95618873;95631721	-	95614262	95631721	cassetteExon	0.5	100	100	ENSMUST00000190604.7	ENSMUSG00000032839.14	Trpc1	chr9	protein_coding	transient receptor potential cation channel, subfamily C, member 1
chr9	95669149	95727224	-	95669149;95677919	95677815;95727224	ES	0.5	50	50	ENSMUST00000093800.9	ENSMUSG00000049493.14	Pls1	chr9	protein_coding	plastin 1 (I-isoform)
chr9	95677919	95697299	-	95677919	95727224	A5SS	0.5	50	50	ENSMUST00000093800.9	ENSMUSG00000049493.14	Pls1	chr9	protein_coding	plastin 1 (I-isoform)
chr9	95737613	95739560	-	95737613	95738525	A5SS&ES	0.5	50	50	ENSMUST00000189279.2	ENSMUSG00000096655.3	1700065D16Rik	chr9	lncRNA	RIKEN cDNA 1700065D16 gene
chr9	95765261	95770153	+	95765261;95767525	95767395;95770153	ES	0.5	50	50	ENSMUST00000034980.9	ENSMUSG00000032409.16	Atr	chr9	protein_coding	ataxia telangiectasia and Rad3 related
chr9	95790513	95792532	+	95790495	95792532	A5SS	0.5	50	50	ENSMUST00000034980.9	ENSMUSG00000032409.16	Atr	chr9	protein_coding	ataxia telangiectasia and Rad3 related
chr9	95828153	95836333	-	95828153	95841281	A5SS	0.33	50	50	ENSMUST00000180727.8	ENSMUSG00000097777.8	Gm16794	chr9	lncRNA	predicted gene, 16794
chr9	95828153	95836681	-	95828153	95841281	A5SS	0.33	50	50	ENSMUST00000180727.8	ENSMUSG00000097777.8	Gm16794	chr9	lncRNA	predicted gene, 16794
chr9	95828153	95836681	-	95828153	95836333	A5SS	0.33	50	50	ENSMUST00000188854.2	ENSMUSG00000097777.8	Gm16794	chr9	lncRNA	predicted gene, 16794
chr9	95855671	95856815	+	95855671;95856516	95856449;95856815	ES	0.5	50	50	ENSMUST00000034981.14	ENSMUSG00000032410.14	Xrn1	chr9	protein_coding	5'-3' exoribonuclease 1
chr9	95836996	95846110	+	95836996	95846024	A3SS	0.5	50	50	ENSMUST00000034981.14	ENSMUSG00000032410.14	Xrn1	chr9	protein_coding	5'-3' exoribonuclease 1
chr9	95921897	95927539	+	95921909	95927539	A5SS	0.5	50	50	ENSMUST00000034981.14	ENSMUSG00000032410.14	Xrn1	chr9	protein_coding	5'-3' exoribonuclease 1
chr9	95871059	95873029	+	95871059	95880269	A3SS	0.5	50	50	ENSMUST00000190665.2	ENSMUSG00000032410.14	Xrn1	chr9	protein_coding	5'-3' exoribonuclease 1
chr9	95877256	95880269	+	95871059	95880269	A5SS	0.5	50	50	ENSMUST00000190665.2	ENSMUSG00000032410.14	Xrn1	chr9	protein_coding	5'-3' exoribonuclease 1
chr9	95900308	95901384	-	95900308;95901280	95901222;95901384	ES	0.5	50	50	ENSMUST00000190970.2	ENSMUSG00000101867.2	C78334	chr9	lncRNA	expressed sequence C78334
chr9	96001665	96015442	+	96001665;96011147	96011054;96015442	ES	0.5	50	50	ENSMUST00000085217.12	ENSMUSG00000041440.19	Gk5	chr9	protein_coding	glycerol kinase 5 (putative)
chr9	96006658	96011054	+	96001665	96011054	A5SS	0.5	50	50	ENSMUST00000085217.12	ENSMUSG00000041440.19	Gk5	chr9	protein_coding	glycerol kinase 5 (putative)
chr9	96105251;96155995	96155892;96177018	+	96105251	96177018	cassetteExon	0.5	100	100	ENSMUST00000165120.9	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96084241	96114735	+	96084241	96105147	A3SS&ES	0.5	50	50	ENSMUST00000165120.9	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96105251	96114735	+	96105251	96177018	A3SS	0.25	50	50	ENSMUST00000165120.9	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96105251	96129103	+	96105251	96177018	A3SS	0.25	50	50	ENSMUST00000165120.9	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96177180	96179677	+	96177180	96179680	A3SS	0.5	50	50	ENSMUST00000165120.9	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96169775	96177018	+	96105251	96177018	A5SS	0.25	50	50	ENSMUST00000165120.9	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96172680	96177018	+	96105251	96177018	A5SS	0.25	50	50	ENSMUST00000165120.9	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96169775	96177018	+	96169775;96172680	96172633;96177018	ES	0.25	50	50	ENSMUST00000034982.16	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96084241;96114801	96114735;96155892	+	96084241;96105251	96105147;96155892	MXE	0.5	100	100	ENSMUST00000034982.16	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96105251;96114801	96114735;96155892	+	96105251	96155892	cassetteExon	0.5	100	100	ENSMUST00000034982.16	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96105251;96129141	96129103;96155892	+	96105251	96155892	cassetteExon	0.5	100	100	ENSMUST00000034982.16	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96140937	96155892	+	96105251	96155892	A5SS	0.16	50	50	ENSMUST00000034982.16	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96140941	96155892	+	96105251	96155892	A5SS	0.16	50	50	ENSMUST00000034982.16	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96141353	96155892	+	96105251	96155892	A5SS	0.16	50	50	ENSMUST00000034982.16	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96141353	96169654	+	96155995	96169654	A5SS&ES	0.5	50	50	ENSMUST00000034982.16	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96155995	96177018	+	96155995;96169775	96169654;96177018	ES	0.25	50	50	ENSMUST00000188008.7	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96084241;96105251	96105147;96114735	+	96084241	96114735	cassetteExon	0.5	100	100	ENSMUST00000188008.7	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96084241;96105251	96105147;96177018	+	96084241;96169775	96114735;96177018	MXE	0.5	100	100	ENSMUST00000188008.7	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96114801;96129141	96129103;96155892	+	96114801	96155892	cassetteExon	0.5	100	100	ENSMUST00000188008.7	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96140937	96155892	+	96114801	96155892	A5SS	0.16	50	50	ENSMUST00000188008.7	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96140941	96155892	+	96114801	96155892	A5SS	0.16	50	50	ENSMUST00000188008.7	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96141353	96155892	+	96114801	96155892	A5SS	0.16	50	50	ENSMUST00000188008.7	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96105251;96129141	96129103;96155892	+	96105251;96114801	96114735;96155892	MXE	0.5	100	100	ENSMUST00000188750.7	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96084241;96105251	96105147;96129103	+	96084241;96114801	96114735;96129103	MXE	0.5	100	100	ENSMUST00000185644.7	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96084241;96105251	96105147;96155892	+	96084241;96129141	96114735;96155892	MXE	0.5	100	100	ENSMUST00000185644.7	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96084241;96105251	96105147;96177018	+	96084241;96172680	96114735;96177018	MXE	0.5	100	100	ENSMUST00000185644.7	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96140937	96155892	+	96129141	96155892	A5SS	0.16	50	50	ENSMUST00000185644.7	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96140941	96155892	+	96129141	96155892	A5SS	0.16	50	50	ENSMUST00000185644.7	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96141353	96155892	+	96129141	96155892	A5SS	0.16	50	50	ENSMUST00000185644.7	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96105251	96129103	+	96105251;96114801	96114735;96129103	ES	0.5	50	50	ENSMUST00000190709.7	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96114801	96155892	+	96114801	96129103	3pMXE	0.5	50	50	ENSMUST00000190709.7	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96084241;96114801	96114735;96155892	+	96084241;96129141	96105147;96155892	MXE	0.5	100	100	ENSMUST00000188829.7	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96172680	96177018	+	96155995	96177018	A5SS	0.33	50	50	ENSMUST00000186609.7	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96155995	96177018	+	96155995	96169654	3pMXE	0.5	50	50	ENSMUST00000190104.7	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96140941	96155892	+	96140937	96155892	A5SS	0.16	50	50	ENSMUST00000190104.7	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96141353	96155892	+	96140937	96155892	A5SS	0.16	50	50	ENSMUST00000190104.7	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96141353	96155892	+	96140941	96155892	A5SS	0.16	50	50	ENSMUST00000189606.7	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96141353;96155995	96155892;96169654	+	96141353	96169654	cassetteExon	0.5	100	100	ENSMUST00000179065.8	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96141353;96155995	96155892;96177018	+	96141353;96172680	96169654;96177018	MXE	0.5	100	100	ENSMUST00000179065.8	ENSMUSG00000032411.16	Tfdp2	chr9	protein_coding	transcription factor Dp 2
chr9	96227946	96231241	-	96227946	96246099	A5SS	0.5	50	50	ENSMUST00000034983.7	ENSMUSG00000032412.9	Atp1b3	chr9	protein_coding	ATPase, Na+/K+ transporting, beta 3 polypeptide
chr9	96356058	96360468	-	96356058	96360461	A5SS	0.5	50	50	ENSMUST00000057500.6	ENSMUSG00000051234.7	Rnf7	chr9	protein_coding	ring finger protein 7
chr9	96493552	96513451	-	96493552	96513417	A5SS	0.5	50	50	ENSMUST00000034984.8	ENSMUSG00000032413.13	Rasa2	chr9	protein_coding	RAS p21 protein activator 2
chr9	96612322	96613345	-	96600362	96613345	A3SS	0.5	50	50	ENSMUST00000152594.8	ENSMUSG00000040433.17	Zbtb38	chr9	protein_coding	zinc finger and BTB domain containing 38
chr9	96630657	96633355	-	96614366	96633355	A3SS	0.5	50	50	ENSMUST00000152594.8	ENSMUSG00000040433.17	Zbtb38	chr9	protein_coding	zinc finger and BTB domain containing 38
chr9	96600362	96601343	-	96600362	96613345	A5SS	0.2	50	50	ENSMUST00000152594.8	ENSMUSG00000040433.17	Zbtb38	chr9	protein_coding	zinc finger and BTB domain containing 38
chr9	96600362	96601413	-	96600362	96613345	A5SS	0.2	50	50	ENSMUST00000152594.8	ENSMUSG00000040433.17	Zbtb38	chr9	protein_coding	zinc finger and BTB domain containing 38
chr9	96600362	96601839	-	96600362	96613345	A5SS	0.2	50	50	ENSMUST00000152594.8	ENSMUSG00000040433.17	Zbtb38	chr9	protein_coding	zinc finger and BTB domain containing 38
chr9	96600362	96611035	-	96600362	96613345	A5SS	0.2	50	50	ENSMUST00000152594.8	ENSMUSG00000040433.17	Zbtb38	chr9	protein_coding	zinc finger and BTB domain containing 38
chr9	96614366	96614734	-	96614366	96633355	A5SS	0.5	50	50	ENSMUST00000152594.8	ENSMUSG00000040433.17	Zbtb38	chr9	protein_coding	zinc finger and BTB domain containing 38
chr9	96600362	96611035	-	96600362	96601839	5pMXE	0.2	50	50	ENSMUST00000126066.8	ENSMUSG00000040433.17	Zbtb38	chr9	protein_coding	zinc finger and BTB domain containing 38
chr9	96600362	96601343	-	96600362	96601839	A5SS	0.2	50	50	ENSMUST00000126066.8	ENSMUSG00000040433.17	Zbtb38	chr9	protein_coding	zinc finger and BTB domain containing 38
chr9	96600362	96601413	-	96600362	96601839	A5SS	0.2	50	50	ENSMUST00000126066.8	ENSMUSG00000040433.17	Zbtb38	chr9	protein_coding	zinc finger and BTB domain containing 38
chr9	96600362	96611035	-	96600362	96601413	5pMXE	0.2	50	50	ENSMUST00000140121.8	ENSMUSG00000040433.17	Zbtb38	chr9	protein_coding	zinc finger and BTB domain containing 38
chr9	96600362	96601343	-	96600362	96601413	A5SS	0.2	50	50	ENSMUST00000140121.8	ENSMUSG00000040433.17	Zbtb38	chr9	protein_coding	zinc finger and BTB domain containing 38
chr9	96600362	96611035	-	96600362	96601343	5pMXE	0.2	50	50	ENSMUST00000128269.8	ENSMUSG00000040433.17	Zbtb38	chr9	protein_coding	zinc finger and BTB domain containing 38
chr9	96652149;96653666	96653534;96655289	+	96652149	96655289	cassetteExon	0.5	100	100	ENSMUST00000189815.7	ENSMUSG00000101581.7	C430002N11Rik	chr9	lncRNA	RIKEN cDNA C430002N11 gene
chr9	96652149;96653666	96653621;96655289	+	96652149	96655289	cassetteExon	0.5	100	100	ENSMUST00000189815.7	ENSMUSG00000101581.7	C430002N11Rik	chr9	lncRNA	RIKEN cDNA C430002N11 gene
chr9	96647731	96652004	+	96647769	96652004	A5SS	0.33	50	50	ENSMUST00000189815.7	ENSMUSG00000101581.7	C430002N11Rik	chr9	lncRNA	RIKEN cDNA C430002N11 gene
chr9	96651788	96652004	+	96647769	96652004	A5SS	0.33	50	50	ENSMUST00000189815.7	ENSMUSG00000101581.7	C430002N11Rik	chr9	lncRNA	RIKEN cDNA C430002N11 gene
chr9	96647731	96652004	+	96647731;96651788	96651671;96652004	ES	0.33	50	50	ENSMUST00000188819.7	ENSMUSG00000101581.7	C430002N11Rik	chr9	lncRNA	RIKEN cDNA C430002N11 gene
chr9	96652149	96653621	+	96652149	96653534	A3SS	0.33	50	50	ENSMUST00000188819.7	ENSMUSG00000101581.7	C430002N11Rik	chr9	lncRNA	RIKEN cDNA C430002N11 gene
chr9	96738552	96771412	-	96738552;96743061	96742844;96771412	ES	0.25	50	50	ENSMUST00000112951.9	ENSMUSG00000043587.16	Pxylp1	chr9	protein_coding	2-phosphoxylose phosphatase 1
chr9	96743061	96773957	-	96743061	96771412	5pMXE	0.33	50	50	ENSMUST00000112951.9	ENSMUSG00000043587.16	Pxylp1	chr9	protein_coding	2-phosphoxylose phosphatase 1
chr9	96722170;96738247	96738087;96738421	-	96722170	96738421	cassetteExon	0.5	100	100	ENSMUST00000112951.9	ENSMUSG00000043587.16	Pxylp1	chr9	protein_coding	2-phosphoxylose phosphatase 1
chr9	96738552;96765685	96765588;96771412	-	96738552;96743061	96742844;96771412	MXE	0.5	100	100	ENSMUST00000112951.9	ENSMUSG00000043587.16	Pxylp1	chr9	protein_coding	2-phosphoxylose phosphatase 1
chr9	96743079	96771412	-	96743061	96771412	A3SS	0.25	50	50	ENSMUST00000112951.9	ENSMUSG00000043587.16	Pxylp1	chr9	protein_coding	2-phosphoxylose phosphatase 1
chr9	96722170	96736555	-	96722170	96738421	A5SS	0.33	50	50	ENSMUST00000112951.9	ENSMUSG00000043587.16	Pxylp1	chr9	protein_coding	2-phosphoxylose phosphatase 1
chr9	96738552	96741951	-	96738552	96742844	A5SS	0.2	50	50	ENSMUST00000112951.9	ENSMUSG00000043587.16	Pxylp1	chr9	protein_coding	2-phosphoxylose phosphatase 1
chr9	96738552	96744889	-	96738552	96742844	A5SS&ES	0.2	50	50	ENSMUST00000112951.9	ENSMUSG00000043587.16	Pxylp1	chr9	protein_coding	2-phosphoxylose phosphatase 1
chr9	96743061	96744889	-	96743061	96771412	A5SS	0.33	50	50	ENSMUST00000112951.9	ENSMUSG00000043587.16	Pxylp1	chr9	protein_coding	2-phosphoxylose phosphatase 1
chr9	96738552	96774659	-	96738552	96771412	5pMXE	0.16	50	50	ENSMUST00000078478.8	ENSMUSG00000043587.16	Pxylp1	chr9	protein_coding	2-phosphoxylose phosphatase 1
chr9	96738552;96743079	96742844;96771412	-	96738552	96771412	cassetteExon	0.5	100	100	ENSMUST00000078478.8	ENSMUSG00000043587.16	Pxylp1	chr9	protein_coding	2-phosphoxylose phosphatase 1
chr9	96738552;96765685	96765588;96771412	-	96738552	96771412	cassetteExon	0.5	100	100	ENSMUST00000078478.8	ENSMUSG00000043587.16	Pxylp1	chr9	protein_coding	2-phosphoxylose phosphatase 1
chr9	96738552	96741951	-	96738552	96771412	A5SS	0.16	50	50	ENSMUST00000078478.8	ENSMUSG00000043587.16	Pxylp1	chr9	protein_coding	2-phosphoxylose phosphatase 1
chr9	96738552	96744889	-	96738552	96771412	A5SS	0.16	50	50	ENSMUST00000078478.8	ENSMUSG00000043587.16	Pxylp1	chr9	protein_coding	2-phosphoxylose phosphatase 1
chr9	96738552;96765685	96765588;96771412	-	96738552;96743079	96742844;96771412	MXE	0.5	100	100	ENSMUST00000120101.8	ENSMUSG00000043587.16	Pxylp1	chr9	protein_coding	2-phosphoxylose phosphatase 1
chr9	96738552	96741951	-	96738552	96765588	A5SS	0.2	50	50	ENSMUST00000119141.8	ENSMUSG00000043587.16	Pxylp1	chr9	protein_coding	2-phosphoxylose phosphatase 1
chr9	96738552	96744889	-	96738552	96765588	A5SS	0.2	50	50	ENSMUST00000119141.8	ENSMUSG00000043587.16	Pxylp1	chr9	protein_coding	2-phosphoxylose phosphatase 1
chr9	96722170	96736555	-	96722170	96738087	A5SS	0.33	50	50	ENSMUST00000126411.8	ENSMUSG00000043587.16	Pxylp1	chr9	protein_coding	2-phosphoxylose phosphatase 1
chr9	96738552	96744889	-	96738552;96742019	96741951;96744889	ES	0.33	50	50	ENSMUST00000121077.8	ENSMUSG00000043587.16	Pxylp1	chr9	protein_coding	2-phosphoxylose phosphatase 1
chr9	96738552;96743061	96742844;96744889	-	96738552;96742019	96741951;96744889	MXE	0.5	100	100	ENSMUST00000121077.8	ENSMUSG00000043587.16	Pxylp1	chr9	protein_coding	2-phosphoxylose phosphatase 1
chr9	96738552	96741951	-	96738552	96774659	A5SS	0.16	50	50	ENSMUST00000154146.8	ENSMUSG00000043587.16	Pxylp1	chr9	protein_coding	2-phosphoxylose phosphatase 1
chr9	96738552	96742844	-	96738552	96774659	A5SS	0.16	50	50	ENSMUST00000154146.8	ENSMUSG00000043587.16	Pxylp1	chr9	protein_coding	2-phosphoxylose phosphatase 1
chr9	96738552	96744889	-	96738552	96774659	A5SS	0.16	50	50	ENSMUST00000154146.8	ENSMUSG00000043587.16	Pxylp1	chr9	protein_coding	2-phosphoxylose phosphatase 1
chr9	96738552	96765588	-	96738552	96774659	A5SS	0.16	50	50	ENSMUST00000154146.8	ENSMUSG00000043587.16	Pxylp1	chr9	protein_coding	2-phosphoxylose phosphatase 1
chr9	96738552;96743061	96742844;96744889	-	96738552	96744889	cassetteExon	0.5	100	100	ENSMUST00000124923.2	ENSMUSG00000043587.16	Pxylp1	chr9	protein_coding	2-phosphoxylose phosphatase 1
chr9	96743061	96773957	-	96743061	96744889	5pMXE	0.33	50	50	ENSMUST00000141127.2	ENSMUSG00000043587.16	Pxylp1	chr9	protein_coding	2-phosphoxylose phosphatase 1
chr9	96826757	96853981	-	96826757	96877628	A5SS	0.33	50	50	ENSMUST00000055433.5	ENSMUSG00000046997.6	Spsb4	chr9	protein_coding	splA/ryanodine receptor domain and SOCS box containing 4
chr9	96826757	96866059	-	96826757	96877628	A5SS	0.33	50	50	ENSMUST00000055433.5	ENSMUSG00000046997.6	Spsb4	chr9	protein_coding	splA/ryanodine receptor domain and SOCS box containing 4
chr9	96826757	96853981	-	96826757	96866059	A5SS	0.33	50	50	ENSMUST00000162307.2	ENSMUSG00000046997.6	Spsb4	chr9	protein_coding	splA/ryanodine receptor domain and SOCS box containing 4
chr9	96899819	96900046	+	96898394	96900046	A5SS	0.5	50	50	ENSMUST00000145410.2	ENSMUSG00000085541.2	Gm16010	chr9	lncRNA	predicted gene 16010
chr9	96967176;96972227	96971873;96975130	-	96967176	96975130	cassetteExon	0.5	100	100	ENSMUST00000085206.11	ENSMUSG00000032449.14	Slc25a36	chr9	protein_coding	solute carrier family 25, member 36
chr9	96967176;96972227	96972146;96975130	-	96967176	96975130	cassetteExon	0.5	100	100	ENSMUST00000085206.11	ENSMUSG00000032449.14	Slc25a36	chr9	protein_coding	solute carrier family 25, member 36
chr9	96974658	96975130	-	96967176	96975130	A3SS	0.33	50	50	ENSMUST00000085206.11	ENSMUSG00000032449.14	Slc25a36	chr9	protein_coding	solute carrier family 25, member 36
chr9	96962535	96966446	-	96962535	96967110	A5SS	0.5	50	50	ENSMUST00000085206.11	ENSMUSG00000032449.14	Slc25a36	chr9	protein_coding	solute carrier family 25, member 36
chr9	96967176	96971544	-	96967176	96975130	A5SS	0.25	50	50	ENSMUST00000085206.11	ENSMUSG00000032449.14	Slc25a36	chr9	protein_coding	solute carrier family 25, member 36
chr9	96974658	96975130	-	96972227	96975130	A3SS	0.33	50	50	ENSMUST00000153070.8	ENSMUSG00000032449.14	Slc25a36	chr9	protein_coding	solute carrier family 25, member 36
chr9	96967176	96971544	-	96967176	96972146	A5SS	0.25	50	50	ENSMUST00000153070.8	ENSMUSG00000032449.14	Slc25a36	chr9	protein_coding	solute carrier family 25, member 36
chr9	96967176	96971873	-	96967176	96972146	A5SS	0.25	50	50	ENSMUST00000153070.8	ENSMUSG00000032449.14	Slc25a36	chr9	protein_coding	solute carrier family 25, member 36
chr9	96967176	96971873	-	96967176	96971544	A5SS	0.25	50	50	ENSMUST00000155291.8	ENSMUSG00000032449.14	Slc25a36	chr9	protein_coding	solute carrier family 25, member 36
chr9	96967176	96975130	-	96967176	96971873	5pMXE	0.25	50	50	ENSMUST00000137372.2	ENSMUSG00000032449.14	Slc25a36	chr9	protein_coding	solute carrier family 25, member 36
chr9	97885750	97891669	+	97885750	97886709	3pMXE	0.5	50	50	ENSMUST00000162370.8	ENSMUSG00000090255.8	4921534H16Rik	chr9	lncRNA	RIKEN cDNA 4921534H16 gene
chr9	98236217	98249423	+	98236217	98281509	A3SS	0.5	50	50	ENSMUST00000134253.8	ENSMUSG00000032456.14	Nmnat3	chr9	protein_coding	nicotinamide nucleotide adenylyltransferase 3
chr9	98179033	98236072	+	98169629	98236072	A5SS	0.5	50	50	ENSMUST00000134253.8	ENSMUSG00000032456.14	Nmnat3	chr9	protein_coding	nicotinamide nucleotide adenylyltransferase 3
chr9	98179033	98281509	+	98236217	98281509	A5SS&ES	0.5	50	50	ENSMUST00000134253.8	ENSMUSG00000032456.14	Nmnat3	chr9	protein_coding	nicotinamide nucleotide adenylyltransferase 3
chr9	98179033	98281509	+	98179033;98236217	98236072;98281509	ES	0.5	50	50	ENSMUST00000112935.8	ENSMUSG00000032456.14	Nmnat3	chr9	protein_coding	nicotinamide nucleotide adenylyltransferase 3
chr9	98285666	98302180	+	98285666	98292130	3pMXE	0.5	50	50	ENSMUST00000112935.8	ENSMUSG00000032456.14	Nmnat3	chr9	protein_coding	nicotinamide nucleotide adenylyltransferase 3
chr9	98179033	98281509	+	98179033	98236072	3pMXE	0.5	50	50	ENSMUST00000141427.2	ENSMUSG00000032456.14	Nmnat3	chr9	protein_coding	nicotinamide nucleotide adenylyltransferase 3
chr9	98368299	98372612	+	98368299	98372601	A3SS	0.5	50	50	ENSMUST00000189446.7	ENSMUSG00000032454.10	Rbp2	chr9	protein_coding	retinol binding protein 2, cellular
chr9	98373897	98380769	+	98372735	98380769	A5SS	0.5	50	50	ENSMUST00000189446.7	ENSMUSG00000032454.10	Rbp2	chr9	protein_coding	retinol binding protein 2, cellular
chr9	98445876	98450046	+	98445876	98446844	3pMXE	0.5	50	50	ENSMUST00000188913.2	ENSMUSG00000032458.7	Copb2	chr9	protein_coding	coatomer protein complex, subunit beta 2 (beta prime)
chr9	98868565;98873024	98872968;98874154	+	98868565	98874154	cassetteExon	0.5	100	100	ENSMUST00000035038.8	ENSMUSG00000032463.11	Faim	chr9	protein_coding	Fas apoptotic inhibitory molecule
chr9	98873905	98874154	+	98868565	98874154	A5SS	0.33	50	50	ENSMUST00000035038.8	ENSMUSG00000032463.11	Faim	chr9	protein_coding	Fas apoptotic inhibitory molecule
chr9	98873905	98874154	+	98873024	98874154	A5SS	0.33	50	50	ENSMUST00000112911.9	ENSMUSG00000032463.11	Faim	chr9	protein_coding	Fas apoptotic inhibitory molecule
chr9	99004429	99022375	-	99004429	99022044	5pMXE	0.33	50	50	ENSMUST00000035037.14	ENSMUSG00000032462.15	Pik3cb	chr9	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta
chr9	98946261	98947617	-	98946261	98947613	A5SS	0.5	50	50	ENSMUST00000035037.14	ENSMUSG00000032462.15	Pik3cb	chr9	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta
chr9	99004429	99021564	-	99004429	99022044	A5SS	0.33	50	50	ENSMUST00000035037.14	ENSMUSG00000032462.15	Pik3cb	chr9	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta
chr9	99004429	99022375	-	99004429	99021564	5pMXE	0.33	50	50	ENSMUST00000136965.8	ENSMUSG00000032462.15	Pik3cb	chr9	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta
chr9	99145002	99157631	+	99145002	99145682	3pMXE	0.5	50	50	ENSMUST00000185799.7	ENSMUSG00000056267.15	Cep70	chr9	protein_coding	centrosomal protein 70
chr9	99125543	99128320	+	99125543	99128276	A3SS	0.5	50	50	ENSMUST00000185799.7	ENSMUSG00000056267.15	Cep70	chr9	protein_coding	centrosomal protein 70
chr9	99145002	99157631	+	99145002;99145862	99145682;99157631	ES	0.5	50	50	ENSMUST00000093795.10	ENSMUSG00000056267.15	Cep70	chr9	protein_coding	centrosomal protein 70
chr9	99125894	99128320	+	99125543	99128320	A5SS	0.33	50	50	ENSMUST00000093795.10	ENSMUSG00000056267.15	Cep70	chr9	protein_coding	centrosomal protein 70
chr9	99125937	99128320	+	99125543	99128320	A5SS	0.33	50	50	ENSMUST00000093795.10	ENSMUSG00000056267.15	Cep70	chr9	protein_coding	centrosomal protein 70
chr9	99125937	99128320	+	99125894	99128320	A5SS	0.33	50	50	ENSMUST00000190078.7	ENSMUSG00000056267.15	Cep70	chr9	protein_coding	centrosomal protein 70
chr9	99202955	99203580	-	99202955;99203497	99203435;99203580	ES	0.5	50	50	ENSMUST00000042158.13	ENSMUSG00000037681.14	Esyt3	chr9	protein_coding	extended synaptotagmin-like protein 3
chr9	99276675	99283276	-	99276675	99293446	A5SS	0.5	50	50	ENSMUST00000035045.15	ENSMUSG00000032470.18	Mras	chr9	protein_coding	muscle and microspikes RAS
chr9	99293655	99302133	-	99293655	99318363	A5SS	0.25	50	50	ENSMUST00000035045.15	ENSMUSG00000032470.18	Mras	chr9	protein_coding	muscle and microspikes RAS
chr9	99293655	99307830	-	99293655	99318363	A5SS	0.25	50	50	ENSMUST00000035045.15	ENSMUSG00000032470.18	Mras	chr9	protein_coding	muscle and microspikes RAS
chr9	99293655	99318934	-	99293655	99318363	A5SS	0.25	50	50	ENSMUST00000035045.15	ENSMUSG00000032470.18	Mras	chr9	protein_coding	muscle and microspikes RAS
chr9	99293655	99302133	-	99293655	99318934	A5SS	0.25	50	50	ENSMUST00000122384.9	ENSMUSG00000032470.18	Mras	chr9	protein_coding	muscle and microspikes RAS
chr9	99293655	99307830	-	99293655	99318934	A5SS	0.25	50	50	ENSMUST00000122384.9	ENSMUSG00000032470.18	Mras	chr9	protein_coding	muscle and microspikes RAS
chr9	99293655	99302133	-	99293655	99307830	A5SS	0.25	50	50	ENSMUST00000119472.8	ENSMUSG00000032470.18	Mras	chr9	protein_coding	muscle and microspikes RAS
chr9	99419812	99450655	-	99419812;99433672	99433596;99450655	ES	0.5	50	50	ENSMUST00000035043.12	ENSMUSG00000032468.12	Armc8	chr9	protein_coding	armadillo repeat containing 8
chr9	99419812	99450655	-	99433672	99450655	3pMXE	0.5	50	50	ENSMUST00000191370.2	ENSMUSG00000032468.12	Armc8	chr9	protein_coding	armadillo repeat containing 8
chr9	99458753	99461410	+	99458753;99460574	99460494;99461410	ES	0.5	50	50	ENSMUST00000066650.12	ENSMUSG00000032469.13	Dbr1	chr9	protein_coding	debranching RNA lariats 1
chr9	99461495	99464075	+	99461495;99462416	99462192;99464075	ES	0.5	50	50	ENSMUST00000066650.12	ENSMUSG00000032469.13	Dbr1	chr9	protein_coding	debranching RNA lariats 1
chr9	99461495	99462298	+	99461495	99462192	A3SS	0.33	50	50	ENSMUST00000066650.12	ENSMUSG00000032469.13	Dbr1	chr9	protein_coding	debranching RNA lariats 1
chr9	99464155	99464444	+	99464155	99464370	A3SS	0.5	50	50	ENSMUST00000066650.12	ENSMUSG00000032469.13	Dbr1	chr9	protein_coding	debranching RNA lariats 1
chr9	99461495;99462416	99462298;99464075	+	99461495	99464075	cassetteExon	0.5	100	100	ENSMUST00000148987.8	ENSMUSG00000032469.13	Dbr1	chr9	protein_coding	debranching RNA lariats 1
chr9	99461495	99464075	+	99462416	99464075	5pMXE	0.5	50	50	ENSMUST00000139796.8	ENSMUSG00000032469.13	Dbr1	chr9	protein_coding	debranching RNA lariats 1
chr9	99511722	99519400	+	99511722;99514801	99514690;99519400	ES	0.25	50	50	ENSMUST00000131095.8	ENSMUSG00000037784.15	Dzip1l	chr9	protein_coding	DAZ interacting protein 1-like
chr9	99512015	99514690	+	99511722	99514690	A5SS	0.5	50	50	ENSMUST00000131095.8	ENSMUSG00000037784.15	Dzip1l	chr9	protein_coding	DAZ interacting protein 1-like
chr9	99512015	99519400	+	99514801	99519400	A5SS&ES	0.25	50	50	ENSMUST00000131095.8	ENSMUSG00000037784.15	Dzip1l	chr9	protein_coding	DAZ interacting protein 1-like
chr9	99516947	99519400	+	99514801	99519400	A5SS	0.25	50	50	ENSMUST00000131095.8	ENSMUSG00000037784.15	Dzip1l	chr9	protein_coding	DAZ interacting protein 1-like
chr9	99545210	99545582	+	99545210	99545579	A3SS	0.5	50	50	ENSMUST00000078367.12	ENSMUSG00000037784.15	Dzip1l	chr9	protein_coding	DAZ interacting protein 1-like
chr9	99512015	99519400	+	99511722	99519400	A5SS	0.25	50	50	ENSMUST00000078367.12	ENSMUSG00000037784.15	Dzip1l	chr9	protein_coding	DAZ interacting protein 1-like
chr9	99516947	99519400	+	99511722	99519400	A5SS	0.25	50	50	ENSMUST00000078367.12	ENSMUSG00000037784.15	Dzip1l	chr9	protein_coding	DAZ interacting protein 1-like
chr9	99526937	99529140	+	99524747	99529140	A5SS	0.5	50	50	ENSMUST00000078367.12	ENSMUSG00000037784.15	Dzip1l	chr9	protein_coding	DAZ interacting protein 1-like
chr9	99512015	99519400	+	99512015;99514801	99514690;99519400	ES	0.25	50	50	ENSMUST00000112885.9	ENSMUSG00000037784.15	Dzip1l	chr9	protein_coding	DAZ interacting protein 1-like
chr9	99511722	99519400	+	99514801	99519400	A5SS&ES	0.25	50	50	ENSMUST00000112885.9	ENSMUSG00000037784.15	Dzip1l	chr9	protein_coding	DAZ interacting protein 1-like
chr9	99516947	99519400	+	99512015	99519400	A5SS	0.25	50	50	ENSMUST00000112886.9	ENSMUSG00000037784.15	Dzip1l	chr9	protein_coding	DAZ interacting protein 1-like
chr9	99581026	99599049	-	99581026	99591782	5pMXE	0.5	50	50	ENSMUST00000035048.12	ENSMUSG00000032473.14	Cldn18	chr9	protein_coding	claudin 18
chr9	99574947	99578107	-	99574947	99578119	A5SS	0.5	50	50	ENSMUST00000035048.12	ENSMUSG00000032473.14	Cldn18	chr9	protein_coding	claudin 18
chr9	99905803;99910191	99910053;99916604	+	99905803	99916604	cassetteExon	0.5	100	100	ENSMUST00000185764.2	ENSMUSG00000101584.3	4930519F24Rik	chr9	lncRNA	RIKEN cDNA 4930519F24 gene
chr9	100266777	100271147	-	100266777	100266877	5pMXE	0.5	50	50	ENSMUST00000213597.2	ENSMUSG00000111258.2	Gm34397	chr9	lncRNA	predicted gene, 34397
chr9	100268671	100271147	-	100266777	100271147	A3SS	0.5	50	50	ENSMUST00000214991.2	ENSMUSG00000111258.2	Gm34397	chr9	lncRNA	predicted gene, 34397
chr9	100271241	100271507	-	100271245	100271507	A3SS	0.5	50	50	ENSMUST00000214991.2	ENSMUSG00000111258.2	Gm34397	chr9	lncRNA	predicted gene, 34397
chr9	100343585	100343703	-	100343585	100348266	A5SS	0.5	50	50	ENSMUST00000098458.4	ENSMUSG00000044244.19	Il20rb	chr9	protein_coding	interleukin 20 receptor beta
chr9	100350500	100352498	-	100350500	100355051	A5SS	0.5	50	50	ENSMUST00000098458.4	ENSMUSG00000044244.19	Il20rb	chr9	protein_coding	interleukin 20 receptor beta
chr9	100380023	100388779	-	100380023	100390482	A5SS	0.5	50	50	ENSMUST00000116522.8	ENSMUSG00000032475.16	Nck1	chr9	protein_coding	non-catalytic region of tyrosine kinase adaptor protein 1
chr9	100390725	100427600	-	100390725	100428048	A5SS	0.33	50	50	ENSMUST00000116522.8	ENSMUSG00000032475.16	Nck1	chr9	protein_coding	non-catalytic region of tyrosine kinase adaptor protein 1
chr9	100390725	100428080	-	100390725	100428048	A5SS	0.33	50	50	ENSMUST00000116522.8	ENSMUSG00000032475.16	Nck1	chr9	protein_coding	non-catalytic region of tyrosine kinase adaptor protein 1
chr9	100390725	100427600	-	100390725	100428080	A5SS	0.33	50	50	ENSMUST00000186591.7	ENSMUSG00000032475.16	Nck1	chr9	protein_coding	non-catalytic region of tyrosine kinase adaptor protein 1
chr9	100525849	100587206	+	100480162	100587206	A5SS	0.33	50	50	ENSMUST00000124487.8	ENSMUSG00000037286.16	Stag1	chr9	protein_coding	stromal antigen 1
chr9	100545351	100587206	+	100480162	100587206	A5SS	0.33	50	50	ENSMUST00000124487.8	ENSMUSG00000037286.16	Stag1	chr9	protein_coding	stromal antigen 1
chr9	100525849;100545351	100545303;100587206	+	100525849	100587206	cassetteExon	0.5	100	100	ENSMUST00000146312.8	ENSMUSG00000037286.16	Stag1	chr9	protein_coding	stromal antigen 1
chr9	100620195	100639743	+	100620195	100668545	A3SS	0.5	50	50	ENSMUST00000146312.8	ENSMUSG00000037286.16	Stag1	chr9	protein_coding	stromal antigen 1
chr9	100658885	100668545	+	100620195	100668545	A5SS	0.5	50	50	ENSMUST00000146312.8	ENSMUSG00000037286.16	Stag1	chr9	protein_coding	stromal antigen 1
chr9	100685407	100727069	+	100685407;100716594	100716471;100727069	ES	0.5	50	50	ENSMUST00000129269.8	ENSMUSG00000037286.16	Stag1	chr9	protein_coding	stromal antigen 1
chr9	100730791	100748153	+	100730791;100737957	100737850;100748153	ES	0.5	50	50	ENSMUST00000129269.8	ENSMUSG00000037286.16	Stag1	chr9	protein_coding	stromal antigen 1
chr9	100813779	100826822	+	100813779;100824792	100824691;100826822	ES	0.5	50	50	ENSMUST00000129269.8	ENSMUSG00000037286.16	Stag1	chr9	protein_coding	stromal antigen 1
chr9	100833834	100836274	+	100833834;100835649	100835539;100836274	ES	0.5	50	50	ENSMUST00000129269.8	ENSMUSG00000037286.16	Stag1	chr9	protein_coding	stromal antigen 1
chr9	100730791;100736207	100736135;100737850	+	100730791	100737850	cassetteExon	0.5	100	100	ENSMUST00000129269.8	ENSMUSG00000037286.16	Stag1	chr9	protein_coding	stromal antigen 1
chr9	100639839	100835546	+	100639839	100658809	A3SS&ES	0.5	50	50	ENSMUST00000129269.8	ENSMUSG00000037286.16	Stag1	chr9	protein_coding	stromal antigen 1
chr9	100639839;100835649	100835546;100836274	+	100639839;100833834	100658809;100836274	MXE	0.5	100	100	ENSMUST00000041418.13	ENSMUSG00000037286.16	Stag1	chr9	protein_coding	stromal antigen 1
chr9	100833834	100836274	+	100835649	100836274	A5SS&ES	0.5	50	50	ENSMUST00000155108.8	ENSMUSG00000037286.16	Stag1	chr9	protein_coding	stromal antigen 1
chr9	100790770;100824792	100824691;100826822	+	100790770;100813779	100810076;100826822	MXE	0.5	100	100	ENSMUST00000149771.8	ENSMUSG00000037286.16	Stag1	chr9	protein_coding	stromal antigen 1
chr9	100685407	100727069	+	100716594	100727069	5pMXE	0.5	50	50	ENSMUST00000143150.2	ENSMUSG00000037286.16	Stag1	chr9	protein_coding	stromal antigen 1
chr9	100730791	100736135	+	100730791	100748153	A3SS	0.33	50	50	ENSMUST00000146934.8	ENSMUSG00000037286.16	Stag1	chr9	protein_coding	stromal antigen 1
chr9	100730791	100748153	+	100730791	100737850	3pMXE	0.33	50	50	ENSMUST00000122824.2	ENSMUSG00000037286.16	Stag1	chr9	protein_coding	stromal antigen 1
chr9	100790770	100810076	+	100790770	100824691	A3SS	0.5	50	50	ENSMUST00000143955.2	ENSMUSG00000037286.16	Stag1	chr9	protein_coding	stromal antigen 1
chr9	100813779	100824691	+	100790770	100824691	A5SS	0.5	50	50	ENSMUST00000143955.2	ENSMUSG00000037286.16	Stag1	chr9	protein_coding	stromal antigen 1
chr9	100813779	100826822	+	100824792	100826822	A5SS&ES	0.5	50	50	ENSMUST00000143955.2	ENSMUSG00000037286.16	Stag1	chr9	protein_coding	stromal antigen 1
chr9	100909189	100913909	-	100909189;100912296	100912228;100913909	ES	0.5	50	50	ENSMUST00000149322.8	ENSMUSG00000032527.14	Pccb	chr9	protein_coding	propionyl Coenzyme A carboxylase, beta polypeptide
chr9	100912296	100916722	-	100912296;100914028	100913909;100916722	ES	0.5	50	50	ENSMUST00000149322.8	ENSMUSG00000032527.14	Pccb	chr9	protein_coding	propionyl Coenzyme A carboxylase, beta polypeptide
chr9	100881326;100894868	100894758;100905189	-	100881326	100905189	cassetteExon	0.5	100	100	ENSMUST00000149322.8	ENSMUSG00000032527.14	Pccb	chr9	protein_coding	propionyl Coenzyme A carboxylase, beta polypeptide
chr9	100894172	100894758	-	100881326	100894758	A3SS	0.5	50	50	ENSMUST00000035116.12	ENSMUSG00000032527.14	Pccb	chr9	protein_coding	propionyl Coenzyme A carboxylase, beta polypeptide
chr9	100909189;100914028	100913909;100916722	-	100909189;100912296	100912228;100916722	MXE	0.5	100	100	ENSMUST00000142676.8	ENSMUSG00000032527.14	Pccb	chr9	protein_coding	propionyl Coenzyme A carboxylase, beta polypeptide
chr9	100957473	100977770	+	100957473;100958009	100957933;100977770	ES	0.5	50	50	ENSMUST00000189616.2	ENSMUSG00000066415.5	Msl2	chr9	protein_coding	MSL complex subunit 2
chr9	100985168;100994503	100994377;101002222	-	100985168	101002222	cassetteExon	0.5	100	100	ENSMUST00000075941.12	ENSMUSG00000043154.16	Ppp2r3a	chr9	protein_coding	protein phosphatase 2, regulatory subunit B'', alpha
chr9	101083491	101088330	-	101071624	101088330	A3SS	0.5	50	50	ENSMUST00000075941.12	ENSMUSG00000043154.16	Ppp2r3a	chr9	protein_coding	protein phosphatase 2, regulatory subunit B'', alpha
chr9	101071624	101075830	-	101071624	101088330	A5SS	0.5	50	50	ENSMUST00000075941.12	ENSMUSG00000043154.16	Ppp2r3a	chr9	protein_coding	protein phosphatase 2, regulatory subunit B'', alpha
chr9	101648184	101699400	-	101647923	101699400	A3SS	0.5	50	50	ENSMUST00000216148.2	ENSMUSG00000100807.3	Gm29521	chr9	lncRNA	predicted gene 29521
chr9	101719407	101739528	-	101699563	101739528	A3SS	0.33	50	50	ENSMUST00000187061.2	ENSMUSG00000100807.3	Gm29521	chr9	lncRNA	predicted gene 29521
chr9	101739438	101739528	-	101699563	101739528	A3SS	0.33	50	50	ENSMUST00000187061.2	ENSMUSG00000100807.3	Gm29521	chr9	lncRNA	predicted gene 29521
chr9	101699563	101704979	-	101699563	101739528	A5SS	0.5	50	50	ENSMUST00000187061.2	ENSMUSG00000100807.3	Gm29521	chr9	lncRNA	predicted gene 29521
chr9	101739438	101739528	-	101719407	101739528	A3SS	0.33	50	50	ENSMUST00000216859.2	ENSMUSG00000100807.3	Gm29521	chr9	lncRNA	predicted gene 29521
chr9	101805732;101814567	101814408;101819882	+	101805732	101819882	cassetteExon	0.5	100	100	ENSMUST00000214589.2	ENSMUSG00000057710.8	9630041A04Rik	chr9	protein_coding	RIKEN cDNA 9630041A04 gene
chr9	101805732;101814717	101814408;101819882	+	101805732	101819882	cassetteExon	0.5	100	100	ENSMUST00000214589.2	ENSMUSG00000057710.8	9630041A04Rik	chr9	protein_coding	RIKEN cDNA 9630041A04 gene
chr9	101816895	101819882	+	101805732	101819882	A5SS	0.25	50	50	ENSMUST00000214589.2	ENSMUSG00000057710.8	9630041A04Rik	chr9	protein_coding	RIKEN cDNA 9630041A04 gene
chr9	101814717	101819882	+	101814567	101819882	A5SS	0.25	50	50	ENSMUST00000214127.2	ENSMUSG00000057710.8	9630041A04Rik	chr9	protein_coding	RIKEN cDNA 9630041A04 gene
chr9	101816895	101819882	+	101814567	101819882	A5SS	0.25	50	50	ENSMUST00000214127.2	ENSMUSG00000057710.8	9630041A04Rik	chr9	protein_coding	RIKEN cDNA 9630041A04 gene
chr9	101816895	101819882	+	101814717	101819882	A5SS	0.25	50	50	ENSMUST00000214563.2	ENSMUSG00000057710.8	9630041A04Rik	chr9	protein_coding	RIKEN cDNA 9630041A04 gene
chr9	101800793	101806466	-	101800793;101804849	101804694;101806466	ES	0.5	50	50	ENSMUST00000035129.14	ENSMUSG00000032537.16	Ephb1	chr9	protein_coding	Eph receptor B1
chr9	101848537	101873108	-	101848537;101861403	101861281;101873108	ES	0.5	50	50	ENSMUST00000035129.14	ENSMUSG00000032537.16	Ephb1	chr9	protein_coding	Eph receptor B1
chr9	101813417	101817535	-	101813417	101841131	A5SS	0.33	50	50	ENSMUST00000035129.14	ENSMUSG00000032537.16	Ephb1	chr9	protein_coding	Eph receptor B1
chr9	101813417	101817816	-	101813417	101841131	A5SS	0.33	50	50	ENSMUST00000035129.14	ENSMUSG00000032537.16	Ephb1	chr9	protein_coding	Eph receptor B1
chr9	101813417	101817535	-	101813417	101817816	A5SS	0.33	50	50	ENSMUST00000217014.2	ENSMUSG00000032537.16	Ephb1	chr9	protein_coding	Eph receptor B1
chr9	102479747	102484525	-	102479747;102480274	102480041;102484525	ES	0.5	50	50	ENSMUST00000162655.9	ENSMUSG00000032534.19	Cep63	chr9	protein_coding	centrosomal protein 63
chr9	102492569	102496891	-	102492569;102496187	102496010;102496891	ES	0.33	50	50	ENSMUST00000162655.9	ENSMUSG00000032534.19	Cep63	chr9	protein_coding	centrosomal protein 63
chr9	102496959;102498927	102498472;102503462	-	102496959	102503462	cassetteExon	0.5	100	100	ENSMUST00000162655.9	ENSMUSG00000032534.19	Cep63	chr9	protein_coding	centrosomal protein 63
chr9	102496959;102498927	102498895;102503462	-	102496959	102503462	cassetteExon	0.5	100	100	ENSMUST00000162655.9	ENSMUSG00000032534.19	Cep63	chr9	protein_coding	centrosomal protein 63
chr9	102467732	102471707	-	102464211	102471707	A3SS	0.5	50	50	ENSMUST00000162655.9	ENSMUSG00000032534.19	Cep63	chr9	protein_coding	centrosomal protein 63
chr9	102496235	102496891	-	102496187	102496891	A3SS	0.33	50	50	ENSMUST00000162655.9	ENSMUSG00000032534.19	Cep63	chr9	protein_coding	centrosomal protein 63
chr9	102464211	102465907	-	102464211	102471707	A5SS	0.5	50	50	ENSMUST00000162655.9	ENSMUSG00000032534.19	Cep63	chr9	protein_coding	centrosomal protein 63
chr9	102496959;102498493	102498472;102498895	-	102496959	102498895	cassetteExon	0.5	100	100	ENSMUST00000093791.10	ENSMUSG00000032534.19	Cep63	chr9	protein_coding	centrosomal protein 63
chr9	102496959	102503462	-	102496959	102498895	5pMXE	0.33	50	50	ENSMUST00000162960.8	ENSMUSG00000032534.19	Cep63	chr9	protein_coding	centrosomal protein 63
chr9	102492569	102496891	-	102492569	102496010	5pMXE	0.5	50	50	ENSMUST00000215253.2	ENSMUSG00000032534.19	Cep63	chr9	protein_coding	centrosomal protein 63
chr9	102479747	102484525	-	102480274	102484525	3pMXE	0.5	50	50	ENSMUST00000213636.2	ENSMUSG00000032534.19	Cep63	chr9	protein_coding	centrosomal protein 63
chr9	102492569;102496235	102496010;102496891	-	102492569	102496891	cassetteExon	0.5	100	100	ENSMUST00000213636.2	ENSMUSG00000032534.19	Cep63	chr9	protein_coding	centrosomal protein 63
chr9	102492569	102496891	-	102496235	102496891	3pMXE	0.33	50	50	ENSMUST00000161645.8	ENSMUSG00000032534.19	Cep63	chr9	protein_coding	centrosomal protein 63
chr9	102498927	102500755	-	102498927	102503462	A5SS	0.5	50	50	ENSMUST00000162297.2	ENSMUSG00000032534.19	Cep63	chr9	protein_coding	centrosomal protein 63
chr9	102503886	102506962	+	102503545	102506962	A5SS	0.25	50	50	ENSMUST00000190279.7	ENSMUSG00000035048.14	Anapc13	chr9	protein_coding	anaphase promoting complex subunit 13
chr9	102504117	102506962	+	102503545	102506962	A5SS	0.25	50	50	ENSMUST00000190279.7	ENSMUSG00000035048.14	Anapc13	chr9	protein_coding	anaphase promoting complex subunit 13
chr9	102506776	102506962	+	102503545	102506962	A5SS	0.25	50	50	ENSMUST00000190279.7	ENSMUSG00000035048.14	Anapc13	chr9	protein_coding	anaphase promoting complex subunit 13
chr9	102503886;102506776	102506746;102506962	+	102503886	102506962	cassetteExon	0.5	100	100	ENSMUST00000188398.7	ENSMUSG00000035048.14	Anapc13	chr9	protein_coding	anaphase promoting complex subunit 13
chr9	102504117	102506962	+	102503886	102506962	A5SS	0.25	50	50	ENSMUST00000188398.7	ENSMUSG00000035048.14	Anapc13	chr9	protein_coding	anaphase promoting complex subunit 13
chr9	102504117	102506962	+	102506776	102506962	A5SS&ES	0.33	50	50	ENSMUST00000038673.14	ENSMUSG00000035048.14	Anapc13	chr9	protein_coding	anaphase promoting complex subunit 13
chr9	102594010;102594285	102594162;102597280	+	102594010	102597280	cassetteExon	0.5	100	100	ENSMUST00000145913.2	ENSMUSG00000032531.16	Amotl2	chr9	protein_coding	angiomotin-like 2
chr9	102594010;102594641	102594162;102597280	+	102594010	102597280	cassetteExon	0.5	100	100	ENSMUST00000145913.2	ENSMUSG00000032531.16	Amotl2	chr9	protein_coding	angiomotin-like 2
chr9	102595101	102597280	+	102594010	102597280	A5SS	0.14	50	50	ENSMUST00000145913.2	ENSMUSG00000032531.16	Amotl2	chr9	protein_coding	angiomotin-like 2
chr9	102595729	102597280	+	102594010	102597280	A5SS	0.14	50	50	ENSMUST00000145913.2	ENSMUSG00000032531.16	Amotl2	chr9	protein_coding	angiomotin-like 2
chr9	102595880	102597280	+	102594010	102597280	A5SS	0.14	50	50	ENSMUST00000145913.2	ENSMUSG00000032531.16	Amotl2	chr9	protein_coding	angiomotin-like 2
chr9	102595912	102597280	+	102594010	102597280	A5SS	0.14	50	50	ENSMUST00000145913.2	ENSMUSG00000032531.16	Amotl2	chr9	protein_coding	angiomotin-like 2
chr9	102607375;102607784	102607686;102607992	+	102607375	102607992	cassetteExon	0.5	100	100	ENSMUST00000153965.8	ENSMUSG00000032531.16	Amotl2	chr9	protein_coding	angiomotin-like 2
chr9	102594641	102597280	+	102594285	102597280	A5SS	0.14	50	50	ENSMUST00000153965.8	ENSMUSG00000032531.16	Amotl2	chr9	protein_coding	angiomotin-like 2
chr9	102595101	102597280	+	102594285	102597280	A5SS	0.14	50	50	ENSMUST00000153965.8	ENSMUSG00000032531.16	Amotl2	chr9	protein_coding	angiomotin-like 2
chr9	102595729	102597280	+	102594285	102597280	A5SS	0.14	50	50	ENSMUST00000153965.8	ENSMUSG00000032531.16	Amotl2	chr9	protein_coding	angiomotin-like 2
chr9	102595880	102597280	+	102594285	102597280	A5SS	0.14	50	50	ENSMUST00000153965.8	ENSMUSG00000032531.16	Amotl2	chr9	protein_coding	angiomotin-like 2
chr9	102595912	102597280	+	102594285	102597280	A5SS	0.14	50	50	ENSMUST00000153965.8	ENSMUSG00000032531.16	Amotl2	chr9	protein_coding	angiomotin-like 2
chr9	102599576	102600768	+	102598075	102600768	A5SS	0.5	50	50	ENSMUST00000153965.8	ENSMUSG00000032531.16	Amotl2	chr9	protein_coding	angiomotin-like 2
chr9	102594010	102597280	+	102594641	102597280	5pMXE	0.14	50	50	ENSMUST00000153911.2	ENSMUSG00000032531.16	Amotl2	chr9	protein_coding	angiomotin-like 2
chr9	102595101	102597280	+	102594641	102597280	A5SS	0.14	50	50	ENSMUST00000153911.2	ENSMUSG00000032531.16	Amotl2	chr9	protein_coding	angiomotin-like 2
chr9	102595729	102597280	+	102594641	102597280	A5SS	0.14	50	50	ENSMUST00000153911.2	ENSMUSG00000032531.16	Amotl2	chr9	protein_coding	angiomotin-like 2
chr9	102595880	102597280	+	102594641	102597280	A5SS	0.14	50	50	ENSMUST00000153911.2	ENSMUSG00000032531.16	Amotl2	chr9	protein_coding	angiomotin-like 2
chr9	102595912	102597280	+	102594641	102597280	A5SS	0.14	50	50	ENSMUST00000153911.2	ENSMUSG00000032531.16	Amotl2	chr9	protein_coding	angiomotin-like 2
chr9	102595729	102597280	+	102595101	102597280	A5SS	0.14	50	50	ENSMUST00000035121.14	ENSMUSG00000032531.16	Amotl2	chr9	protein_coding	angiomotin-like 2
chr9	102595880	102597280	+	102595101	102597280	A5SS	0.14	50	50	ENSMUST00000035121.14	ENSMUSG00000032531.16	Amotl2	chr9	protein_coding	angiomotin-like 2
chr9	102595912	102597280	+	102595101	102597280	A5SS	0.14	50	50	ENSMUST00000035121.14	ENSMUSG00000032531.16	Amotl2	chr9	protein_coding	angiomotin-like 2
chr9	102595880	102597280	+	102595729	102597280	A5SS	0.14	50	50	ENSMUST00000156485.2	ENSMUSG00000032531.16	Amotl2	chr9	protein_coding	angiomotin-like 2
chr9	102595912	102597280	+	102595729	102597280	A5SS	0.14	50	50	ENSMUST00000156485.2	ENSMUSG00000032531.16	Amotl2	chr9	protein_coding	angiomotin-like 2
chr9	102595880	102597280	+	102595912	102597280	A5SS	0.14	50	50	ENSMUST00000145937.2	ENSMUSG00000032531.16	Amotl2	chr9	protein_coding	angiomotin-like 2
chr9	102712438	102744754	+	102712438;102739194	102739073;102744754	ES	0.5	50	50	ENSMUST00000175883.8	ENSMUSG00000032547.13	Ryk	chr9	protein_coding	receptor-like tyrosine kinase
chr9	102758953	102763202	+	102758953	102763193	A3SS	0.5	50	50	ENSMUST00000175883.8	ENSMUSG00000032547.13	Ryk	chr9	protein_coding	receptor-like tyrosine kinase
chr9	102723393	102739073	+	102712438	102739073	A5SS	0.5	50	50	ENSMUST00000175883.8	ENSMUSG00000032547.13	Ryk	chr9	protein_coding	receptor-like tyrosine kinase
chr9	102885914	102923884	+	102885914	102896025	3pMXE	0.5	50	50	ENSMUST00000185215.2	ENSMUSG00000032548.15	Slco2a1	chr9	protein_coding	solute carrier organic anion transporter family, member 2a1
chr9	102950511	102954123	+	102950511;102951764	102951575;102954123	ES	0.5	50	50	ENSMUST00000035148.13	ENSMUSG00000032548.15	Slco2a1	chr9	protein_coding	solute carrier organic anion transporter family, member 2a1
chr9	102961808	102962460	-	102960276	102962460	A3SS	0.5	50	50	ENSMUST00000215971.2	ENSMUSG00000110765.2	Gm47468	chr9	lncRNA	predicted gene, 47468
chr9	102989425;103017639	103017581;103038019	+	102989425	103038019	cassetteExon	0.5	100	100	ENSMUST00000189134.2	ENSMUSG00000032549.8	Rab6b	chr9	protein_coding	RAB6B, member RAS oncogene family
chr9	103067675	103068268	-	103067620	103068268	A3SS	0.5	50	50	ENSMUST00000035157.10	ENSMUSG00000032553.15	Srprb	chr9	protein_coding	signal recognition particle receptor, B subunit
chr9	103094717	103096422	-	103094732	103096422	A3SS	0.5	50	50	ENSMUST00000112645.8	ENSMUSG00000032554.16	Trf	chr9	protein_coding	transferrin
chr9	103094717	103097001	-	103096454	103097001	A3SS&ES	0.5	50	50	ENSMUST00000112645.8	ENSMUSG00000032554.16	Trf	chr9	protein_coding	transferrin
chr9	103105267	103105528	-	103105267	103107373	A5SS	0.5	50	50	ENSMUST00000112645.8	ENSMUSG00000032554.16	Trf	chr9	protein_coding	transferrin
chr9	103094717	103097001	-	103094717;103096454	103096422;103097001	ES	0.5	50	50	ENSMUST00000168142.8	ENSMUSG00000032554.16	Trf	chr9	protein_coding	transferrin
chr9	103159866	103181993	-	103159866	103165380	5pMXE	0.5	50	50	ENSMUST00000035163.10	ENSMUSG00000033688.11	1300017J02Rik	chr9	protein_coding	RIKEN cDNA 1300017J02 gene
chr9	103133828;103134282	103134271;103136569	-	103133828	103136569	cassetteExon	0.5	100	100	ENSMUST00000035163.10	ENSMUSG00000033688.11	1300017J02Rik	chr9	protein_coding	RIKEN cDNA 1300017J02 gene
chr9	103149517	103149686	-	103146982	103149686	A3SS	0.5	50	50	ENSMUST00000035163.10	ENSMUSG00000033688.11	1300017J02Rik	chr9	protein_coding	RIKEN cDNA 1300017J02 gene
chr9	103145653	103146811	-	103143458	103146811	A3SS	0.5	50	50	ENSMUST00000123530.8	ENSMUSG00000033688.11	1300017J02Rik	chr9	protein_coding	RIKEN cDNA 1300017J02 gene
chr9	103143458	103144831	-	103143458	103146811	A5SS	0.5	50	50	ENSMUST00000123530.8	ENSMUSG00000033688.11	1300017J02Rik	chr9	protein_coding	RIKEN cDNA 1300017J02 gene
chr9	103211378	103213263	+	103211378;103213157	103213011;103213263	ES	0.5	50	50	ENSMUST00000035164.10	ENSMUSG00000032555.11	Topbp1	chr9	protein_coding	topoisomerase (DNA) II binding protein 1
chr9	103221235	103222941	+	103221235;103222153	103221990;103222941	ES	0.5	50	50	ENSMUST00000035164.10	ENSMUSG00000032555.11	Topbp1	chr9	protein_coding	topoisomerase (DNA) II binding protein 1
chr9	103182840	103183296	+	103182570	103183296	A5SS	0.5	50	50	ENSMUST00000035164.10	ENSMUSG00000032555.11	Topbp1	chr9	protein_coding	topoisomerase (DNA) II binding protein 1
chr9	103221235	103222941	+	103222153	103222941	A5SS	0.5	50	50	ENSMUST00000190712.3	ENSMUSG00000032555.11	Topbp1	chr9	protein_coding	topoisomerase (DNA) II binding protein 1
chr9	103233225	103233479	-	103232512	103233479	A3SS	0.33	50	50	ENSMUST00000035484.11	ENSMUSG00000032803.16	Cdv3	chr9	protein_coding	carnitine deficiency-associated gene expressed in ventricle 3
chr9	103233228	103233479	-	103232512	103233479	A3SS	0.33	50	50	ENSMUST00000035484.11	ENSMUSG00000032803.16	Cdv3	chr9	protein_coding	carnitine deficiency-associated gene expressed in ventricle 3
chr9	103233632	103237075	-	103233638	103237075	A3SS	0.5	50	50	ENSMUST00000035484.11	ENSMUSG00000032803.16	Cdv3	chr9	protein_coding	carnitine deficiency-associated gene expressed in ventricle 3
chr9	103241250	103241662	-	103241250	103242253	A5SS	0.5	50	50	ENSMUST00000035484.11	ENSMUSG00000032803.16	Cdv3	chr9	protein_coding	carnitine deficiency-associated gene expressed in ventricle 3
chr9	103233225	103233479	-	103233228	103233479	A3SS	0.33	50	50	ENSMUST00000116517.9	ENSMUSG00000032803.16	Cdv3	chr9	protein_coding	carnitine deficiency-associated gene expressed in ventricle 3
chr9	103304014	103304888	+	103304014;103304585	103304349;103304888	ES	0.5	50	50	ENSMUST00000143564.8	ENSMUSG00000086236.10	5830418P13Rik	chr9	lncRNA	RIKEN cDNA 5830418P13 gene
chr9	103304585	103305573	+	103304585	103304888	A3SS&ES	0.5	50	50	ENSMUST00000143564.8	ENSMUSG00000086236.10	5830418P13Rik	chr9	lncRNA	RIKEN cDNA 5830418P13 gene
chr9	103305705	103320697	+	103305705	103337018	A3SS	0.5	50	50	ENSMUST00000143564.8	ENSMUSG00000086236.10	5830418P13Rik	chr9	lncRNA	RIKEN cDNA 5830418P13 gene
chr9	103303436	103303776	+	103300828	103303776	A5SS	0.5	50	50	ENSMUST00000143564.8	ENSMUSG00000086236.10	5830418P13Rik	chr9	lncRNA	RIKEN cDNA 5830418P13 gene
chr9	103304014	103305597	+	103304014;103304986	103304888;103305597	ES	0.5	50	50	ENSMUST00000145185.3	ENSMUSG00000086236.10	5830418P13Rik	chr9	lncRNA	RIKEN cDNA 5830418P13 gene
chr9	103304014	103304888	+	103304014	103304349	A3SS&ES	0.33	50	50	ENSMUST00000194378.3	ENSMUSG00000086236.10	5830418P13Rik	chr9	lncRNA	RIKEN cDNA 5830418P13 gene
chr9	103304014	103305597	+	103304014	103304349	A3SS&ES	0.33	50	50	ENSMUST00000194378.3	ENSMUSG00000086236.10	5830418P13Rik	chr9	lncRNA	RIKEN cDNA 5830418P13 gene
chr9	103318602	103320697	+	103305705	103320697	A5SS	0.5	50	50	ENSMUST00000194378.3	ENSMUSG00000086236.10	5830418P13Rik	chr9	lncRNA	RIKEN cDNA 5830418P13 gene
chr9	103325909	103327004	-	103325909	103326260	5pMXE	0.5	50	50	ENSMUST00000136636.2	ENSMUSG00000032556.12	Bfsp2	chr9	protein_coding	beaded filament structural protein 2, phakinin
chr9	103366995	103369299	+	103350147	103369299	A5SS	0.5	50	50	ENSMUST00000144420.2	ENSMUSG00000085168.3	Gm16252	chr9	lncRNA	predicted gene 16252
chr9	103486995	103630054	-	103486995	103569918	5pMXE	0.5	50	50	ENSMUST00000049452.15	ENSMUSG00000042757.17	Tmem108	chr9	protein_coding	transmembrane protein 108
chr9	103384314	103486910	-	103377407	103486910	A3SS	0.5	50	50	ENSMUST00000049452.15	ENSMUSG00000042757.17	Tmem108	chr9	protein_coding	transmembrane protein 108
chr9	103486991	103630054	-	103486995	103630054	A3SS	0.5	50	50	ENSMUST00000189588.7	ENSMUSG00000042757.17	Tmem108	chr9	protein_coding	transmembrane protein 108
chr9	103809362	103822914	-	103809362;103816744	103816651;103822914	ES	0.33	50	50	ENSMUST00000217020.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103816744	103824040	-	103816744	103822914	5pMXE	0.25	50	50	ENSMUST00000217020.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103816744	103833101	-	103816744	103822914	5pMXE	0.25	50	50	ENSMUST00000217020.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103816744	103836522	-	103816744	103822914	5pMXE	0.25	50	50	ENSMUST00000217020.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362;103812046	103811974;103816651	-	103809362	103816651	cassetteExon	0.5	100	100	ENSMUST00000217020.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362;103812066	103811974;103816651	-	103809362	103816651	cassetteExon	0.5	100	100	ENSMUST00000217020.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362;103814192	103813978;103816651	-	103809362	103816651	cassetteExon	0.5	100	100	ENSMUST00000217020.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075	103809271	-	103773136	103809271	A3SS	0.33	50	50	ENSMUST00000217020.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075	103816651	-	103809362	103816651	A3SS&ES	0.2	50	50	ENSMUST00000217020.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075	103822914	-	103816744	103822914	A3SS&ES	0.33	50	50	ENSMUST00000217020.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103803749	103809271	-	103773136	103809271	A3SS	0.33	50	50	ENSMUST00000217020.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075;103809362	103809271;103836522	-	103797075	103836522	cassetteExon	0.5	100	100	ENSMUST00000214481.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075;103816690	103816651;103836522	-	103797075	103836522	cassetteExon	0.5	100	100	ENSMUST00000214481.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075;103816744	103816651;103836522	-	103797075	103836522	cassetteExon	0.5	100	100	ENSMUST00000214481.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075;103824208	103824040;103836522	-	103797075	103836522	cassetteExon	0.5	100	100	ENSMUST00000214481.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103796830	103796918	-	103796291	103796918	A3SS	0.5	50	50	ENSMUST00000214481.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103824925	103836522	-	103797075	103836522	A3SS	0.09	50	50	ENSMUST00000214481.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103825925	103836522	-	103797075	103836522	A3SS	0.09	50	50	ENSMUST00000214481.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103829287	103836522	-	103797075	103836522	A3SS	0.09	50	50	ENSMUST00000214481.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103833970	103836522	-	103797075	103836522	A3SS	0.09	50	50	ENSMUST00000214481.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103834708	103836522	-	103797075	103836522	A3SS	0.09	50	50	ENSMUST00000214481.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103835621	103836522	-	103797075	103836522	A3SS	0.09	50	50	ENSMUST00000214481.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075	103803648	-	103797075	103836522	A5SS	0.14	50	50	ENSMUST00000214481.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075	103808813	-	103797075	103836522	A5SS	0.14	50	50	ENSMUST00000214481.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075	103822914	-	103797075	103836522	A5SS	0.14	50	50	ENSMUST00000214481.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103836618	103836996	-	103836618	103837313	A5SS	0.33	50	50	ENSMUST00000214481.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103836618	103837196	-	103836618	103837313	A5SS	0.33	50	50	ENSMUST00000214481.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075	103816651	-	103797075;103809362	103809271;103816651	ES	0.2	50	50	ENSMUST00000189536.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362	103836522	-	103809362;103816744	103816651;103836522	ES	0.09	50	50	ENSMUST00000189536.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075;103803749	103803648;103809271	-	103797075	103809271	cassetteExon	0.5	100	100	ENSMUST00000189536.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075;103824208	103824040;103836522	-	103797075;103816744	103809271;103836522	MXE	0.5	100	100	ENSMUST00000189536.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103816744;103824208	103824040;103836522	-	103816744	103836522	cassetteExon	0.5	100	100	ENSMUST00000189536.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362;103835621	103835493;103836522	-	103809362;103816744	103816651;103836522	MXE	0.5	100	100	ENSMUST00000189536.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103816690	103836522	-	103816744	103836522	A3SS	0.09	50	50	ENSMUST00000189536.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103824925	103836522	-	103816744	103836522	A3SS	0.09	50	50	ENSMUST00000189536.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103825925	103836522	-	103816744	103836522	A3SS	0.09	50	50	ENSMUST00000189536.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103829287	103836522	-	103816744	103836522	A3SS	0.09	50	50	ENSMUST00000189536.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103833970	103836522	-	103816744	103836522	A3SS	0.09	50	50	ENSMUST00000189536.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103834708	103836522	-	103816744	103836522	A3SS	0.09	50	50	ENSMUST00000189536.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075	103808813	-	103797075	103809271	A5SS	0.14	50	50	ENSMUST00000189536.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075	103822914	-	103797075	103809271	A5SS&ES	0.14	50	50	ENSMUST00000189536.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362	103822914	-	103809362	103816651	A5SS&ES	0.16	50	50	ENSMUST00000189536.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103816744	103833101	-	103816744	103836522	A5SS	0.25	50	50	ENSMUST00000189536.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362	103813978	-	103809362;103812066	103811974;103813978	ES	0.5	50	50	ENSMUST00000213824.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103812066	103816651	-	103812066;103814192	103813978;103816651	ES	0.2	50	50	ENSMUST00000213824.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103812046	103816651	-	103814192	103816651	A3SS&ES	0.2	50	50	ENSMUST00000213824.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075	103824040	-	103797075	103822914	5pMXE	0.14	50	50	ENSMUST00000216200.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075;103809362	103809271;103822914	-	103797075	103822914	cassetteExon	0.5	100	100	ENSMUST00000216200.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075;103816744	103816651;103822914	-	103797075	103822914	cassetteExon	0.5	100	100	ENSMUST00000216200.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075	103803648	-	103797075	103822914	A5SS	0.14	50	50	ENSMUST00000216200.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075	103808813	-	103797075	103822914	A5SS	0.14	50	50	ENSMUST00000216200.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362	103835493	-	103809362	103822914	5pMXE	0.16	50	50	ENSMUST00000215243.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362	103836522	-	103809362	103822914	5pMXE	0.16	50	50	ENSMUST00000215243.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075;103816744	103816651;103822914	-	103797075;103809362	103809271;103822914	MXE	0.5	100	100	ENSMUST00000215243.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362	103811974	-	103809362	103822914	A5SS	0.16	50	50	ENSMUST00000215243.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362	103813978	-	103809362	103822914	A5SS	0.16	50	50	ENSMUST00000215243.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362;103814192	103813978;103816651	-	103809362;103812066	103811974;103816651	MXE	0.5	100	100	ENSMUST00000214506.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362;103835621	103835493;103836522	-	103809362;103816744	103811974;103836522	MXE	0.5	100	100	ENSMUST00000214506.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103812046	103816651	-	103812066	103816651	A3SS	0.2	50	50	ENSMUST00000214506.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103836618	103836996	-	103836618	103837196	A5SS	0.33	50	50	ENSMUST00000214506.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075	103824040	-	103797075;103816744	103816651;103824040	ES	0.5	50	50	ENSMUST00000215433.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075;103809362	103809271;103836522	-	103797075;103824208	103816651;103836522	MXE	0.5	100	100	ENSMUST00000215433.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103824208;103824925	103824735;103836522	-	103824208	103836522	cassetteExon	0.5	100	100	ENSMUST00000215433.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103824208;103824925	103824764;103836522	-	103824208	103836522	cassetteExon	0.5	100	100	ENSMUST00000215433.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103824208;103834708	103834631;103836522	-	103824208	103836522	cassetteExon	0.5	100	100	ENSMUST00000215433.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103812046	103816651	-	103797075	103816651	A3SS	0.2	50	50	ENSMUST00000215433.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103812066	103816651	-	103797075	103816651	A3SS	0.2	50	50	ENSMUST00000215433.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103814192	103816651	-	103797075	103816651	A3SS	0.2	50	50	ENSMUST00000215433.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103816690	103836522	-	103824208	103836522	A3SS&ES	0.09	50	50	ENSMUST00000215433.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103825925	103836522	-	103824208	103836522	A3SS	0.09	50	50	ENSMUST00000215433.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103829287	103836522	-	103824208	103836522	A3SS	0.09	50	50	ENSMUST00000215433.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103833970	103836522	-	103824208	103836522	A3SS	0.09	50	50	ENSMUST00000215433.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103835621	103836522	-	103824208	103836522	A3SS	0.09	50	50	ENSMUST00000215433.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075	103803648	-	103797075	103816651	A5SS	0.14	50	50	ENSMUST00000215433.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075	103808813	-	103797075	103816651	A5SS	0.14	50	50	ENSMUST00000215433.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075	103822914	-	103797075	103816651	A5SS&ES	0.14	50	50	ENSMUST00000215433.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103816744	103833101	-	103816744	103824040	A5SS&ES	0.25	50	50	ENSMUST00000215433.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362;103812046	103811974;103816651	-	103809362;103814192	103813978;103816651	MXE	0.5	100	100	ENSMUST00000214068.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362;103835621	103835493;103836522	-	103809362;103816744	103813978;103836522	MXE	0.5	100	100	ENSMUST00000214068.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075;103824208	103824040;103836522	-	103797075;103816744	103803648;103836522	MXE	0.5	100	100	ENSMUST00000213447.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075	103808813	-	103797075	103803648	A5SS&ES	0.14	50	50	ENSMUST00000213447.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103825925	103836522	-	103825925;103829287	103829081;103836522	ES	0.09	50	50	ENSMUST00000217560.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103824208;103834708	103834631;103836522	-	103824208;103829287	103824735;103836522	MXE	0.5	100	100	ENSMUST00000217560.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103825925;103834708	103834631;103836522	-	103825925;103829287	103829081;103836522	MXE	0.5	100	100	ENSMUST00000217560.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362;103835621	103835493;103836522	-	103809362;103829287	103811974;103836522	MXE	0.5	100	100	ENSMUST00000217560.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103816690	103836522	-	103829287	103836522	A3SS&ES	0.09	50	50	ENSMUST00000217560.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103833970	103836522	-	103829287	103836522	A3SS	0.09	50	50	ENSMUST00000217560.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103824208	103824764	-	103824208	103824735	A5SS	0.25	50	50	ENSMUST00000217560.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362;103835621	103835493;103836522	-	103809362;103824208	103816651;103836522	MXE	0.5	100	100	ENSMUST00000214974.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362;103835621	103835493;103836522	-	103809362;103824208	103811974;103836522	MXE	0.5	100	100	ENSMUST00000215646.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075;103816690	103816651;103836522	-	103797075;103809362	103809271;103836522	MXE	0.5	100	100	ENSMUST00000217473.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362;103816690	103816651;103836522	-	103809362	103836522	cassetteExon	0.5	100	100	ENSMUST00000217473.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075;103816744	103816651;103836522	-	103797075;103809362	103809271;103836522	MXE	0.5	100	100	ENSMUST00000217473.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075;103824208	103824040;103836522	-	103797075;103809362	103809271;103836522	MXE	0.5	100	100	ENSMUST00000217473.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362;103835621	103835493;103836522	-	103809362	103836522	cassetteExon	0.5	100	100	ENSMUST00000217473.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103824925	103836522	-	103809362	103836522	A3SS	0.09	50	50	ENSMUST00000217473.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103825925	103836522	-	103809362	103836522	A3SS	0.09	50	50	ENSMUST00000217473.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103829287	103836522	-	103809362	103836522	A3SS	0.09	50	50	ENSMUST00000217473.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103833970	103836522	-	103809362	103836522	A3SS	0.09	50	50	ENSMUST00000217473.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103834708	103836522	-	103809362	103836522	A3SS	0.09	50	50	ENSMUST00000217473.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362	103811974	-	103809362	103836522	A5SS	0.16	50	50	ENSMUST00000217473.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362	103813978	-	103809362	103836522	A5SS	0.16	50	50	ENSMUST00000217473.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075;103824208	103824040;103836522	-	103797075;103816690	103809271;103836522	MXE	0.5	100	100	ENSMUST00000215443.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362;103835621	103835493;103836522	-	103809362;103816690	103816651;103836522	MXE	0.5	100	100	ENSMUST00000215443.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103824925	103836522	-	103816690	103836522	A3SS	0.09	50	50	ENSMUST00000215443.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103825925	103836522	-	103816690	103836522	A3SS	0.09	50	50	ENSMUST00000215443.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103833970	103836522	-	103816690	103836522	A3SS	0.09	50	50	ENSMUST00000215443.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103834708	103836522	-	103816690	103836522	A3SS	0.09	50	50	ENSMUST00000215443.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103824925	103836522	-	103824925;103825925	103825858;103836522	ES	0.09	50	50	ENSMUST00000213655.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103824208;103834708	103834631;103836522	-	103824208;103825925	103824764;103836522	MXE	0.5	100	100	ENSMUST00000213655.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103825925;103834708	103834631;103836522	-	103825925	103836522	cassetteExon	0.5	100	100	ENSMUST00000213655.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362;103835621	103835493;103836522	-	103809362;103825925	103811974;103836522	MXE	0.5	100	100	ENSMUST00000213655.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103833970	103836522	-	103825925	103836522	A3SS	0.09	50	50	ENSMUST00000213655.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075;103809362	103809271;103836522	-	103797075;103824925	103816651;103836522	MXE	0.5	100	100	ENSMUST00000214530.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103824208;103834708	103834631;103836522	-	103824208;103824925	103824735;103836522	MXE	0.5	100	100	ENSMUST00000214530.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103829287	103836522	-	103824925	103836522	A3SS	0.09	50	50	ENSMUST00000214530.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103833970	103836522	-	103824925	103836522	A3SS	0.09	50	50	ENSMUST00000214530.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103835621	103836522	-	103824925	103836522	A3SS	0.09	50	50	ENSMUST00000214530.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075;103816690	103816651;103836522	-	103797075;103824208	103824040;103836522	MXE	0.5	100	100	ENSMUST00000214189.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075;103816744	103816651;103836522	-	103797075;103824208	103824040;103836522	MXE	0.5	100	100	ENSMUST00000214189.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075	103803648	-	103797075	103824040	A5SS	0.14	50	50	ENSMUST00000214189.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075	103808813	-	103797075	103824040	A5SS	0.14	50	50	ENSMUST00000214189.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103835621	103836522	-	103816744	103836522	A3SS	0.09	50	50	ENSMUST00000217380.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362;103835621	103835493;103836522	-	103809362;103834708	103816651;103836522	MXE	0.5	100	100	ENSMUST00000214866.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103833970	103836522	-	103834708	103836522	A3SS&ES	0.09	50	50	ENSMUST00000214866.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075;103816690	103816651;103836522	-	103797075;103835621	103809271;103836522	MXE	0.5	100	100	ENSMUST00000213151.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075;103816744	103816651;103836522	-	103797075;103835621	103809271;103836522	MXE	0.5	100	100	ENSMUST00000213151.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075;103824208	103824040;103836522	-	103797075;103835621	103809271;103836522	MXE	0.5	100	100	ENSMUST00000213151.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103825925	103836522	-	103835621	103836522	A3SS&ES	0.09	50	50	ENSMUST00000213151.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103829287	103836522	-	103835621	103836522	A3SS&ES	0.09	50	50	ENSMUST00000213151.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103833970	103836522	-	103835621	103836522	A3SS&ES	0.09	50	50	ENSMUST00000213151.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103834708	103836522	-	103835621	103836522	A3SS&ES	0.09	50	50	ENSMUST00000213151.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362	103811974	-	103809362	103835493	A5SS	0.16	50	50	ENSMUST00000213151.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362	103813978	-	103809362	103835493	A5SS	0.16	50	50	ENSMUST00000213151.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103824208;103834708	103834631;103836522	-	103824208;103824925	103824764;103836522	MXE	0.5	100	100	ENSMUST00000216494.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362;103835621	103835493;103836522	-	103809362;103824925	103816651;103836522	MXE	0.5	100	100	ENSMUST00000216494.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075;103809362	103809271;103836522	-	103797075;103825925	103816651;103836522	MXE	0.5	100	100	ENSMUST00000214629.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362;103835621	103835493;103836522	-	103809362;103825925	103816651;103836522	MXE	0.5	100	100	ENSMUST00000213410.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075;103809362	103809271;103836522	-	103797075;103833970	103816651;103836522	MXE	0.5	100	100	ENSMUST00000213614.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075;103824208	103824040;103836522	-	103797075;103833970	103816651;103836522	MXE	0.5	100	100	ENSMUST00000213614.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103816744;103824208	103824040;103836522	-	103816744;103833970	103833101;103836522	MXE	0.5	100	100	ENSMUST00000213614.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075;103809362	103809271;103836522	-	103797075;103834708	103824040;103836522	MXE	0.5	100	100	ENSMUST00000215272.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075;103816690	103816651;103836522	-	103797075;103834708	103824040;103836522	MXE	0.5	100	100	ENSMUST00000215272.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075;103816744	103816651;103836522	-	103797075;103834708	103824040;103836522	MXE	0.5	100	100	ENSMUST00000215272.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103825925	103834631	-	103824208	103834631	A3SS	0.5	50	50	ENSMUST00000215272.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103825925	103836522	-	103834708	103836522	A3SS&ES	0.09	50	50	ENSMUST00000215272.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103829287	103836522	-	103834708	103836522	A3SS&ES	0.09	50	50	ENSMUST00000215272.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103797075	103836522	-	103816744	103836522	3pMXE	0.09	50	50	ENSMUST00000217242.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103809362	103836522	-	103816744	103836522	3pMXE	0.09	50	50	ENSMUST00000217242.2	ENSMUSG00000099722.4	Gm29154	chr9	lncRNA	predicted gene 29154
chr9	103900004	103901781	+	103900004;103900716	103900619;103901781	ES	0.5	50	50	ENSMUST00000193642.6	ENSMUSG00000032558.20	Nphp3	chr9	protein_coding	nephronophthisis 3 (adolescent)
chr9	103901883	103907161	+	103901883;103903183	103903101;103907161	ES	0.5	50	50	ENSMUST00000193642.6	ENSMUSG00000032558.20	Nphp3	chr9	protein_coding	nephronophthisis 3 (adolescent)
chr9	103914606	103915657	+	103914606	103915634	A3SS	0.5	50	50	ENSMUST00000193642.6	ENSMUSG00000032558.20	Nphp3	chr9	protein_coding	nephronophthisis 3 (adolescent)
chr9	103880000	103881913	+	103880360	103881913	A5SS	0.33	50	50	ENSMUST00000193642.6	ENSMUSG00000032558.20	Nphp3	chr9	protein_coding	nephronophthisis 3 (adolescent)
chr9	103880078	103881913	+	103880360	103881913	A5SS	0.33	50	50	ENSMUST00000193642.6	ENSMUSG00000032558.20	Nphp3	chr9	protein_coding	nephronophthisis 3 (adolescent)
chr9	103917946	103919151	+	103917946;103918453	103918338;103919151	ES	0.5	50	50	ENSMUST00000035167.15	ENSMUSG00000032558.20	Nphp3	chr9	protein_coding	nephronophthisis 3 (adolescent)
chr9	103918453	103950821	+	103918453	103919151	3pMXE	0.5	50	50	ENSMUST00000035167.15	ENSMUSG00000032558.20	Nphp3	chr9	protein_coding	nephronophthisis 3 (adolescent)
chr9	103916773	103917801	+	103916773	103917821	A3SS	0.5	50	50	ENSMUST00000035167.15	ENSMUSG00000032558.20	Nphp3	chr9	protein_coding	nephronophthisis 3 (adolescent)
chr9	103880078	103881913	+	103880000	103881913	A5SS	0.33	50	50	ENSMUST00000194774.6	ENSMUSG00000032558.20	Nphp3	chr9	protein_coding	nephronophthisis 3 (adolescent)
chr9	103917946	103919151	+	103917946	103918338	A3SS&ES	0.5	50	50	ENSMUST00000147249.3	ENSMUSG00000101152.2	Gm28305	chr9	protein_coding	predicted gene 28305
chr9	103940719	103950821	+	103918453	103950821	A5SS	0.33	50	50	ENSMUST00000147249.3	ENSMUSG00000101152.2	Gm28305	chr9	protein_coding	predicted gene 28305
chr9	103941102	103950821	+	103918453	103950821	A5SS	0.33	50	50	ENSMUST00000147249.3	ENSMUSG00000101152.2	Gm28305	chr9	protein_coding	predicted gene 28305
chr9	103926878	103927034	-	103926800	103927034	A3SS	0.5	50	50	ENSMUST00000035166.12	ENSMUSG00000032557.14	Uba5	chr9	protein_coding	ubiquitin-like modifier activating enzyme 5
chr9	103924885	103926489	-	103924885	103926433	A5SS	0.5	50	50	ENSMUST00000035166.12	ENSMUSG00000032557.14	Uba5	chr9	protein_coding	ubiquitin-like modifier activating enzyme 5
chr9	103931657	103932382	-	103931657	103932389	A5SS	0.5	50	50	ENSMUST00000035166.12	ENSMUSG00000032557.14	Uba5	chr9	protein_coding	ubiquitin-like modifier activating enzyme 5
chr9	103933088	103934104	-	103933088	103934073	A5SS	0.5	50	50	ENSMUST00000035166.12	ENSMUSG00000032557.14	Uba5	chr9	protein_coding	ubiquitin-like modifier activating enzyme 5
chr9	103934182	103937358	-	103934182	103937417	A5SS	0.33	50	50	ENSMUST00000035166.12	ENSMUSG00000032557.14	Uba5	chr9	protein_coding	ubiquitin-like modifier activating enzyme 5
chr9	103934182	103937422	-	103934182	103937417	A5SS	0.33	50	50	ENSMUST00000035166.12	ENSMUSG00000032557.14	Uba5	chr9	protein_coding	ubiquitin-like modifier activating enzyme 5
chr9	103934182	103937358	-	103934182	103937422	A5SS	0.33	50	50	ENSMUST00000144195.3	ENSMUSG00000032557.14	Uba5	chr9	protein_coding	ubiquitin-like modifier activating enzyme 5
chr9	103974651	103984825	+	103974651	103990661	A3SS	0.5	50	50	ENSMUST00000120854.8	ENSMUSG00000090150.11	Acad11	chr9	protein_coding	acyl-Coenzyme A dehydrogenase family, member 11
chr9	103941102	103950821	+	103940719	103950821	A5SS	0.33	50	50	ENSMUST00000120854.8	ENSMUSG00000090150.11	Acad11	chr9	protein_coding	acyl-Coenzyme A dehydrogenase family, member 11
chr9	103968472	103968791	+	103967534	103968791	A5SS	0.5	50	50	ENSMUST00000120854.8	ENSMUSG00000090150.11	Acad11	chr9	protein_coding	acyl-Coenzyme A dehydrogenase family, member 11
chr9	104001103	104001217	+	104000362	104001217	A5SS	0.5	50	50	ENSMUST00000120854.8	ENSMUSG00000090150.11	Acad11	chr9	protein_coding	acyl-Coenzyme A dehydrogenase family, member 11
chr9	103976954	103979478	-	103972503	103979478	A3SS	0.5	50	50	ENSMUST00000050139.5	ENSMUSG00000079355.6	Ackr4	chr9	protein_coding	atypical chemokine receptor 4
chr9	103976954	103978111	-	103976954	103979478	A5SS	0.5	50	50	ENSMUST00000076147.6	ENSMUSG00000079355.6	Ackr4	chr9	protein_coding	atypical chemokine receptor 4
chr9	104069967	104074358	-	104069967;104073306	104073222;104074358	ES	0.33	50	50	ENSMUST00000035170.13	ENSMUSG00000032560.15	Dnajc13	chr9	protein_coding	DnaJ heat shock protein family (Hsp40) member C13
chr9	104029622;104030575	104030467;104034013	-	104029622	104034013	cassetteExon	0.5	100	100	ENSMUST00000035170.13	ENSMUSG00000032560.15	Dnajc13	chr9	protein_coding	DnaJ heat shock protein family (Hsp40) member C13
chr9	104073306;104073529	104073401;104074358	-	104073306	104074358	cassetteExon	0.5	100	100	ENSMUST00000035170.13	ENSMUSG00000032560.15	Dnajc13	chr9	protein_coding	DnaJ heat shock protein family (Hsp40) member C13
chr9	104086586;104087082	104087068;104089960	-	104086586	104089960	cassetteExon	0.5	100	100	ENSMUST00000035170.13	ENSMUSG00000032560.15	Dnajc13	chr9	protein_coding	DnaJ heat shock protein family (Hsp40) member C13
chr9	104039612	104039846	-	104039612	104039854	A5SS	0.5	50	50	ENSMUST00000035170.13	ENSMUSG00000032560.15	Dnajc13	chr9	protein_coding	DnaJ heat shock protein family (Hsp40) member C13
chr9	104029622	104034013	-	104029622	104030467	5pMXE	0.5	50	50	ENSMUST00000189813.2	ENSMUSG00000032560.15	Dnajc13	chr9	protein_coding	DnaJ heat shock protein family (Hsp40) member C13
chr9	104069967;104073529	104073222;104074358	-	104069967	104074358	cassetteExon	0.5	100	100	ENSMUST00000189103.7	ENSMUSG00000032560.15	Dnajc13	chr9	protein_coding	DnaJ heat shock protein family (Hsp40) member C13
chr9	104069967	104074358	-	104073306	104074358	3pMXE	0.33	50	50	ENSMUST00000188592.2	ENSMUSG00000032560.15	Dnajc13	chr9	protein_coding	DnaJ heat shock protein family (Hsp40) member C13
chr9	104201403	104204080	-	104201403;104201928	104201842;104204080	ES	0.5	50	50	ENSMUST00000062723.14	ENSMUSG00000032561.16	Acpp	chr9	protein_coding	acid phosphatase, prostate
chr9	104177667	104178015	-	104168728	104178015	A3SS	0.5	50	50	ENSMUST00000062723.14	ENSMUSG00000032561.16	Acpp	chr9	protein_coding	acid phosphatase, prostate
chr9	104444099	104563624	+	104431831	104563624	A5SS	0.25	50	50	ENSMUST00000098443.9	ENSMUSG00000032564.17	Cpne4	chr9	protein_coding	copine IV
chr9	104447300	104563624	+	104431831	104563624	A5SS	0.25	50	50	ENSMUST00000098443.9	ENSMUSG00000032564.17	Cpne4	chr9	protein_coding	copine IV
chr9	104462792	104563624	+	104431831	104563624	A5SS	0.25	50	50	ENSMUST00000098443.9	ENSMUSG00000032564.17	Cpne4	chr9	protein_coding	copine IV
chr9	104447300	104563624	+	104444099	104563624	A5SS	0.25	50	50	ENSMUST00000157006.8	ENSMUSG00000032564.17	Cpne4	chr9	protein_coding	copine IV
chr9	104462792	104563624	+	104444099	104563624	A5SS	0.25	50	50	ENSMUST00000157006.8	ENSMUSG00000032564.17	Cpne4	chr9	protein_coding	copine IV
chr9	104462792	104563624	+	104447300	104563624	A5SS	0.25	50	50	ENSMUST00000057742.15	ENSMUSG00000032564.17	Cpne4	chr9	protein_coding	copine IV
chr9	104803038	104866771	+	104803038	104884733	A3SS	0.5	50	50	ENSMUST00000077190.7	ENSMUSG00000032564.17	Cpne4	chr9	protein_coding	copine IV
chr9	104871086	104884733	+	104803038	104884733	A5SS	0.33	50	50	ENSMUST00000077190.7	ENSMUSG00000032564.17	Cpne4	chr9	protein_coding	copine IV
chr9	104750057	104777417	+	104750057	104884733	A3SS	0.5	50	50	ENSMUST00000213452.2	ENSMUSG00000032564.17	Cpne4	chr9	protein_coding	copine IV
chr9	104803038	104884733	+	104750057	104884733	A5SS	0.33	50	50	ENSMUST00000213452.2	ENSMUSG00000032564.17	Cpne4	chr9	protein_coding	copine IV
chr9	104871086	104884733	+	104750057	104884733	A5SS	0.33	50	50	ENSMUST00000213452.2	ENSMUSG00000032564.17	Cpne4	chr9	protein_coding	copine IV
chr9	104934322;104938883	104938719;104939098	+	104934322	104939098	cassetteExon	0.5	100	100	ENSMUST00000149243.8	ENSMUSG00000032563.17	Mrpl3	chr9	protein_coding	mitochondrial ribosomal protein L3
chr9	104930711	104931624	+	104930711	104931620	A3SS	0.25	50	50	ENSMUST00000149243.8	ENSMUSG00000032563.17	Mrpl3	chr9	protein_coding	mitochondrial ribosomal protein L3
chr9	104930711	104931644	+	104930711	104931620	A3SS	0.25	50	50	ENSMUST00000149243.8	ENSMUSG00000032563.17	Mrpl3	chr9	protein_coding	mitochondrial ribosomal protein L3
chr9	104930711	104931714	+	104930711	104931620	A3SS	0.25	50	50	ENSMUST00000149243.8	ENSMUSG00000032563.17	Mrpl3	chr9	protein_coding	mitochondrial ribosomal protein L3
chr9	104941087	104941263	+	104939197	104941263	A5SS	0.5	50	50	ENSMUST00000149243.8	ENSMUSG00000032563.17	Mrpl3	chr9	protein_coding	mitochondrial ribosomal protein L3
chr9	104942251	104948575	+	104941323	104948575	A5SS	0.5	50	50	ENSMUST00000149243.8	ENSMUSG00000032563.17	Mrpl3	chr9	protein_coding	mitochondrial ribosomal protein L3
chr9	104930711	104931644	+	104930711	104931624	A3SS	0.25	50	50	ENSMUST00000190492.7	ENSMUSG00000032563.17	Mrpl3	chr9	protein_coding	mitochondrial ribosomal protein L3
chr9	104930711	104931714	+	104930711	104931624	A3SS	0.25	50	50	ENSMUST00000190492.7	ENSMUSG00000032563.17	Mrpl3	chr9	protein_coding	mitochondrial ribosomal protein L3
chr9	104930711	104931714	+	104930711	104931644	A3SS	0.25	50	50	ENSMUST00000214036.2	ENSMUSG00000032563.17	Mrpl3	chr9	protein_coding	mitochondrial ribosomal protein L3
chr9	105008755	105008842	-	105008761	105008842	A3SS	0.5	50	50	ENSMUST00000035179.9	ENSMUSG00000032565.10	Nudt16	chr9	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 16
chr9	105177599	105191886	-	105177599;105190740	105190614;105191886	ES	0.5	50	50	ENSMUST00000038648.11	ENSMUSG00000035032.13	Nek11	chr9	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 11
chr9	105200435	105270048	-	105200435;105225337	105225172;105270048	ES	0.5	50	50	ENSMUST00000038648.11	ENSMUSG00000035032.13	Nek11	chr9	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 11
chr9	105074881	105081989	-	105040446	105081989	A3SS	0.5	50	50	ENSMUST00000038648.11	ENSMUSG00000035032.13	Nek11	chr9	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 11
chr9	105270280	105272395	-	105270359	105272395	A3SS	0.5	50	50	ENSMUST00000038648.11	ENSMUSG00000035032.13	Nek11	chr9	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 11
chr9	105278885;105279975	105279917;105280595	+	105278885	105280595	cassetteExon	0.5	100	100	ENSMUST00000035181.10	ENSMUSG00000032567.17	Aste1	chr9	protein_coding	asteroid homolog 1
chr9	105273053	105273744	+	105272864	105273744	A5SS	0.5	50	50	ENSMUST00000035181.10	ENSMUSG00000032567.17	Aste1	chr9	protein_coding	asteroid homolog 1
chr9	105273904	105278675	+	105275057	105278675	A5SS	0.33	50	50	ENSMUST00000035181.10	ENSMUSG00000032567.17	Aste1	chr9	protein_coding	asteroid homolog 1
chr9	105277998	105278675	+	105275057	105278675	A5SS	0.33	50	50	ENSMUST00000035181.10	ENSMUSG00000032567.17	Aste1	chr9	protein_coding	asteroid homolog 1
chr9	105273904	105278675	+	105273904;105275057	105274824;105278675	ES	0.33	50	50	ENSMUST00000176597.8	ENSMUSG00000032567.17	Aste1	chr9	protein_coding	asteroid homolog 1
chr9	105273904	105273997	+	105273904	105274824	A3SS	0.33	50	50	ENSMUST00000176597.8	ENSMUSG00000032567.17	Aste1	chr9	protein_coding	asteroid homolog 1
chr9	105273904	105278675	+	105273904;105275057	105273997;105278675	ES	0.33	50	50	ENSMUST00000123807.8	ENSMUSG00000032567.17	Aste1	chr9	protein_coding	asteroid homolog 1
chr9	105273904	105273997	+	105273904	105278675	A3SS	0.33	50	50	ENSMUST00000176350.5	ENSMUSG00000032567.17	Aste1	chr9	protein_coding	asteroid homolog 1
chr9	105277998	105278675	+	105273904	105278675	A5SS	0.33	50	50	ENSMUST00000176350.5	ENSMUSG00000032567.17	Aste1	chr9	protein_coding	asteroid homolog 1
chr9	105280782	105290264	-	105280782;105284402	105284315;105290264	ES	0.5	50	50	ENSMUST00000177293.8	ENSMUSG00000032570.18	Atp2c1	chr9	protein_coding	ATPase, Ca++-sequestering
chr9	105312407	105313753	-	105312407	105316540	A5SS	0.5	50	50	ENSMUST00000177293.8	ENSMUSG00000032570.18	Atp2c1	chr9	protein_coding	ATPase, Ca++-sequestering
chr9	105326087	105328992	-	105326087	105329003	A5SS	0.5	50	50	ENSMUST00000177293.8	ENSMUSG00000032570.18	Atp2c1	chr9	protein_coding	ATPase, Ca++-sequestering
chr9	105280782	105291833	-	105280782;105290388	105290264;105291833	ES	0.5	50	50	ENSMUST00000176770.8	ENSMUSG00000032570.18	Atp2c1	chr9	protein_coding	ATPase, Ca++-sequestering
chr9	105338277	105343782	-	105338277;105341860	105341825;105343782	ES	0.5	50	50	ENSMUST00000176770.8	ENSMUSG00000032570.18	Atp2c1	chr9	protein_coding	ATPase, Ca++-sequestering
chr9	105347346	105404211	-	105347346	105398239	5pMXE	0.16	50	50	ENSMUST00000176770.8	ENSMUSG00000032570.18	Atp2c1	chr9	protein_coding	ATPase, Ca++-sequestering
chr9	105343871;105345016	105344900;105347236	-	105343871	105347236	cassetteExon	0.5	100	100	ENSMUST00000176770.8	ENSMUSG00000032570.18	Atp2c1	chr9	protein_coding	ATPase, Ca++-sequestering
chr9	105347346	105347493	-	105347346	105398239	A5SS	0.16	50	50	ENSMUST00000176770.8	ENSMUSG00000032570.18	Atp2c1	chr9	protein_coding	ATPase, Ca++-sequestering
chr9	105347346	105370742	-	105347346	105398239	A5SS	0.16	50	50	ENSMUST00000176770.8	ENSMUSG00000032570.18	Atp2c1	chr9	protein_coding	ATPase, Ca++-sequestering
chr9	105347346	105371614	-	105347346	105398239	A5SS	0.16	50	50	ENSMUST00000176770.8	ENSMUSG00000032570.18	Atp2c1	chr9	protein_coding	ATPase, Ca++-sequestering
chr9	105347346	105372092	-	105347346	105398239	A5SS	0.16	50	50	ENSMUST00000176770.8	ENSMUSG00000032570.18	Atp2c1	chr9	protein_coding	ATPase, Ca++-sequestering
chr9	105347346	105372092	-	105347346	105371614	5pMXE	0.16	50	50	ENSMUST00000177074.8	ENSMUSG00000032570.18	Atp2c1	chr9	protein_coding	ATPase, Ca++-sequestering
chr9	105347346	105404211	-	105347346	105371614	5pMXE	0.16	50	50	ENSMUST00000177074.8	ENSMUSG00000032570.18	Atp2c1	chr9	protein_coding	ATPase, Ca++-sequestering
chr9	105347346;105370753	105370742;105371614	-	105347346	105371614	cassetteExon	0.5	100	100	ENSMUST00000177074.8	ENSMUSG00000032570.18	Atp2c1	chr9	protein_coding	ATPase, Ca++-sequestering
chr9	105280782	105284315	-	105280782	105291833	A5SS	0.33	50	50	ENSMUST00000177074.8	ENSMUSG00000032570.18	Atp2c1	chr9	protein_coding	ATPase, Ca++-sequestering
chr9	105347346	105347493	-	105347346	105371614	A5SS	0.16	50	50	ENSMUST00000177074.8	ENSMUSG00000032570.18	Atp2c1	chr9	protein_coding	ATPase, Ca++-sequestering
chr9	105280782	105291833	-	105290388	105291833	3pMXE	0.5	50	50	ENSMUST00000112558.10	ENSMUSG00000032570.18	Atp2c1	chr9	protein_coding	ATPase, Ca++-sequestering
chr9	105347346	105372092	-	105347346;105371681	105371614;105372092	ES	0.33	50	50	ENSMUST00000112558.10	ENSMUSG00000032570.18	Atp2c1	chr9	protein_coding	ATPase, Ca++-sequestering
chr9	105371681	105372566	-	105371681	105372092	5pMXE	0.5	50	50	ENSMUST00000112558.10	ENSMUSG00000032570.18	Atp2c1	chr9	protein_coding	ATPase, Ca++-sequestering
chr9	105371796	105372092	-	105371681	105372092	A3SS	0.33	50	50	ENSMUST00000112558.10	ENSMUSG00000032570.18	Atp2c1	chr9	protein_coding	ATPase, Ca++-sequestering
chr9	105347346	105372092	-	105347346;105371796	105371614;105372092	ES	0.33	50	50	ENSMUST00000038118.15	ENSMUSG00000032570.18	Atp2c1	chr9	protein_coding	ATPase, Ca++-sequestering
chr9	105347346	105404211	-	105347346	105372092	5pMXE	0.16	50	50	ENSMUST00000163879.9	ENSMUSG00000032570.18	Atp2c1	chr9	protein_coding	ATPase, Ca++-sequestering
chr9	105347346	105347493	-	105347346	105372092	A5SS	0.16	50	50	ENSMUST00000163879.9	ENSMUSG00000032570.18	Atp2c1	chr9	protein_coding	ATPase, Ca++-sequestering
chr9	105347346	105370742	-	105347346	105372092	A5SS	0.16	50	50	ENSMUST00000163879.9	ENSMUSG00000032570.18	Atp2c1	chr9	protein_coding	ATPase, Ca++-sequestering
chr9	105347346	105370742	-	105347346	105347493	5pMXE	0.16	50	50	ENSMUST00000176651.8	ENSMUSG00000032570.18	Atp2c1	chr9	protein_coding	ATPase, Ca++-sequestering
chr9	105347346	105404211	-	105347346	105347493	5pMXE	0.16	50	50	ENSMUST00000176651.8	ENSMUSG00000032570.18	Atp2c1	chr9	protein_coding	ATPase, Ca++-sequestering
chr9	105347346	105370742	-	105347346	105404211	A5SS	0.16	50	50	ENSMUST00000190802.2	ENSMUSG00000032570.18	Atp2c1	chr9	protein_coding	ATPase, Ca++-sequestering
chr9	105338277	105343782	-	105341860	105343782	3pMXE	0.5	50	50	ENSMUST00000177334.2	ENSMUSG00000032570.18	Atp2c1	chr9	protein_coding	ATPase, Ca++-sequestering
chr9	105520226	105521395	+	105520589	105521395	A5SS	0.33	50	50	ENSMUST00000187573.7	ENSMUSG00000032571.15	Pik3r4	chr9	protein_coding	phosphoinositide-3-kinase regulatory subunit 4
chr9	105520620	105521395	+	105520589	105521395	A5SS	0.33	50	50	ENSMUST00000187573.7	ENSMUSG00000032571.15	Pik3r4	chr9	protein_coding	phosphoinositide-3-kinase regulatory subunit 4
chr9	105520620	105521395	+	105520226	105521395	A5SS	0.33	50	50	ENSMUST00000190358.2	ENSMUSG00000032571.15	Pik3r4	chr9	protein_coding	phosphoinositide-3-kinase regulatory subunit 4
chr9	105586783	105586807	-	105586783	105589696	A5SS	0.5	50	50	ENSMUST00000098441.10	ENSMUSG00000043719.15	Col6a6	chr9	protein_coding	collagen, type VI, alpha 6
chr9	105666191	105686630	-	105666191	105705102	A5SS	0.5	50	50	ENSMUST00000098441.10	ENSMUSG00000043719.15	Col6a6	chr9	protein_coding	collagen, type VI, alpha 6
chr9	105735883	105739029	-	105734536	105739029	A3SS	0.5	50	50	ENSMUST00000190193.8	ENSMUSG00000091345.10	Col6a5	chr9	protein_coding	collagen, type VI, alpha 5
chr9	105874420	105877411	-	105874420	105875491	5pMXE	0.5	50	50	ENSMUST00000149207.2	ENSMUSG00000032572.10	Col6a4	chr9	protein_coding	collagen, type VI, alpha 4
chr9	105948441	105949113	-	105945591	105949113	A3SS	0.5	50	50	ENSMUST00000121963.3	ENSMUSG00000032572.10	Col6a4	chr9	protein_coding	collagen, type VI, alpha 4
chr9	105999408	106003460	-	105999408;106003210	106002958;106003460	ES	0.5	50	50	ENSMUST00000213687.2	ENSMUSG00000100795.3	Gm29208	chr9	lncRNA	predicted gene 29208
chr9	105999408	106003134	-	105999408	106002958	A5SS	0.33	50	50	ENSMUST00000213687.2	ENSMUSG00000100795.3	Gm29208	chr9	lncRNA	predicted gene 29208
chr9	106003210	106003768	-	106003210	106003460	A5SS	0.33	50	50	ENSMUST00000213687.2	ENSMUSG00000100795.3	Gm29208	chr9	lncRNA	predicted gene 29208
chr9	106003210	106004004	-	106003210	106003460	A5SS	0.33	50	50	ENSMUST00000213687.2	ENSMUSG00000100795.3	Gm29208	chr9	lncRNA	predicted gene 29208
chr9	105999408;106003210	106003134;106003460	-	105999408	106003460	cassetteExon	0.5	100	100	ENSMUST00000213306.2	ENSMUSG00000100795.3	Gm29208	chr9	lncRNA	predicted gene 29208
chr9	105999408;106003647	106003460;106003768	-	105999408;106003210	106002958;106003768	MXE	0.5	100	100	ENSMUST00000187162.3	ENSMUSG00000100795.3	Gm29208	chr9	lncRNA	predicted gene 29208
chr9	106003210;106003647	106003460;106003768	-	106003210	106003768	cassetteExon	0.5	100	100	ENSMUST00000187162.3	ENSMUSG00000100795.3	Gm29208	chr9	lncRNA	predicted gene 29208
chr9	106003210	106004004	-	106003210	106003768	A5SS	0.33	50	50	ENSMUST00000187162.3	ENSMUSG00000100795.3	Gm29208	chr9	lncRNA	predicted gene 29208
chr9	105999408	106003460	-	105999408	106002958	A5SS	0.33	50	50	ENSMUST00000214544.2	ENSMUSG00000100795.3	Gm29208	chr9	lncRNA	predicted gene 29208
chr9	106033716	106036980	+	106033716	106034192	3pMXE	0.5	50	50	ENSMUST00000150953.2	ENSMUSG00000086296.3	D030055H07Rik	chr9	lncRNA	RIKEN cDNA D030055H07 gene
chr9	106033733	106034344	-	106033783	106034344	A3SS	0.5	50	50	ENSMUST00000036382.13	ENSMUSG00000020258.17	Glyctk	chr9	protein_coding	glycerate kinase
chr9	106035103	106035199	-	106035103	106035240	A5SS	0.33	50	50	ENSMUST00000112543.9	ENSMUSG00000020258.17	Glyctk	chr9	protein_coding	glycerate kinase
chr9	106035103	106035250	-	106035103	106035240	A5SS	0.33	50	50	ENSMUST00000112543.9	ENSMUSG00000020258.17	Glyctk	chr9	protein_coding	glycerate kinase
chr9	106035103	106035250	-	106035103	106035199	A5SS	0.33	50	50	ENSMUST00000162562.2	ENSMUSG00000020258.17	Glyctk	chr9	protein_coding	glycerate kinase
chr9	106048578	106057765	+	106048578;106053909	106053812;106057765	ES	0.5	50	50	ENSMUST00000020490.13	ENSMUSG00000020257.14	Wdr82	chr9	protein_coding	WD repeat domain containing 82
chr9	106053909	106060815	+	106053909;106057831	106057765;106060815	ES	0.5	50	50	ENSMUST00000020490.13	ENSMUSG00000020257.14	Wdr82	chr9	protein_coding	WD repeat domain containing 82
chr9	106057831	106061379	+	106057831;106060914	106060815;106061379	ES	0.5	50	50	ENSMUST00000020490.13	ENSMUSG00000020257.14	Wdr82	chr9	protein_coding	WD repeat domain containing 82
chr9	106048578;106053909	106053812;106060815	+	106048578;106057831	106057765;106060815	MXE	0.5	100	100	ENSMUST00000216761.2	ENSMUSG00000020257.14	Wdr82	chr9	protein_coding	WD repeat domain containing 82
chr9	106048578	106053812	+	106048578	106061882	A3SS	0.33	50	50	ENSMUST00000214444.2	ENSMUSG00000020257.14	Wdr82	chr9	protein_coding	WD repeat domain containing 82
chr9	106048578	106057765	+	106048578	106061882	A3SS	0.33	50	50	ENSMUST00000214444.2	ENSMUSG00000020257.14	Wdr82	chr9	protein_coding	WD repeat domain containing 82
chr9	106061495	106061882	+	106048578	106061882	A5SS	0.5	50	50	ENSMUST00000214444.2	ENSMUSG00000020257.14	Wdr82	chr9	protein_coding	WD repeat domain containing 82
chr9	106048578;106057831	106057765;106061379	+	106048578;106060914	106053812;106061379	MXE	0.5	100	100	ENSMUST00000217532.2	ENSMUSG00000020257.14	Wdr82	chr9	protein_coding	WD repeat domain containing 82
chr9	106053909;106057831	106057765;106061379	+	106053909;106060914	106060815;106061379	MXE	0.5	100	100	ENSMUST00000217532.2	ENSMUSG00000020257.14	Wdr82	chr9	protein_coding	WD repeat domain containing 82
chr9	106048578	106057765	+	106053909	106057765	5pMXE	0.5	50	50	ENSMUST00000190564.2	ENSMUSG00000020257.14	Wdr82	chr9	protein_coding	WD repeat domain containing 82
chr9	106073356	106073792	-	106073356;106073630	106073567;106073792	ES	0.5	50	50	ENSMUST00000136431.2	ENSMUSG00000020253.16	Ppm1m	chr9	protein_coding	protein phosphatase 1M
chr9	106074087	106074941	-	106074087;106074538	106074426;106074941	ES	0.5	50	50	ENSMUST00000076258.13	ENSMUSG00000020253.16	Ppm1m	chr9	protein_coding	protein phosphatase 1M
chr9	106075423	106076169	-	106075423	106075871	5pMXE	0.33	50	50	ENSMUST00000076258.13	ENSMUSG00000020253.16	Ppm1m	chr9	protein_coding	protein phosphatase 1M
chr9	106075423	106076678	-	106075423	106075871	5pMXE	0.33	50	50	ENSMUST00000076258.13	ENSMUSG00000020253.16	Ppm1m	chr9	protein_coding	protein phosphatase 1M
chr9	106074538	106075088	-	106074538	106074941	A5SS	0.5	50	50	ENSMUST00000076258.13	ENSMUSG00000020253.16	Ppm1m	chr9	protein_coding	protein phosphatase 1M
chr9	106075423	106076678	-	106075423	106076169	5pMXE	0.33	50	50	ENSMUST00000140761.9	ENSMUSG00000020253.16	Ppm1m	chr9	protein_coding	protein phosphatase 1M
chr9	106089096	106089931	+	106089096;106089550	106089455;106089931	ES	0.5	50	50	ENSMUST00000024047.12	ENSMUSG00000023277.14	Twf2	chr9	protein_coding	twinfilin actin binding protein 2
chr9	106089550	106090137	+	106089550;106090035	106089931;106090137	ES	0.5	50	50	ENSMUST00000024047.12	ENSMUSG00000023277.14	Twf2	chr9	protein_coding	twinfilin actin binding protein 2
chr9	106080483;106081446	106081109;106084088	+	106080483	106084088	cassetteExon	0.5	100	100	ENSMUST00000024047.12	ENSMUSG00000023277.14	Twf2	chr9	protein_coding	twinfilin actin binding protein 2
chr9	106084165	106088923	+	106084165	106088918	A3SS	0.5	50	50	ENSMUST00000024047.12	ENSMUSG00000023277.14	Twf2	chr9	protein_coding	twinfilin actin binding protein 2
chr9	106089096;106089550	106089455;106090137	+	106089096;106090035	106089931;106090137	MXE	0.5	100	100	ENSMUST00000216348.2	ENSMUSG00000023277.14	Twf2	chr9	protein_coding	twinfilin actin binding protein 2
chr9	106089096	106089931	+	106089096	106089455	3pMXE	0.5	50	50	ENSMUST00000187944.3	ENSMUSG00000023277.14	Twf2	chr9	protein_coding	twinfilin actin binding protein 2
chr9	106089550	106090137	+	106089550	106089931	3pMXE	0.5	50	50	ENSMUST00000187647.2	ENSMUSG00000023277.14	Twf2	chr9	protein_coding	twinfilin actin binding protein 2
chr9	106089096	106089931	+	106089550	106089931	5pMXE	0.5	50	50	ENSMUST00000217523.2	ENSMUSG00000023277.14	Twf2	chr9	protein_coding	twinfilin actin binding protein 2
chr9	106113907	106115842	-	106113907;106115438	106115274;106115842	ES	0.33	50	50	ENSMUST00000112524.9	ENSMUSG00000032786.17	Alas1	chr9	protein_coding	aminolevulinic acid synthase 1
chr9	106116915	106118835	-	106116915;106118537	106118315;106118835	ES	0.5	50	50	ENSMUST00000112524.9	ENSMUSG00000032786.17	Alas1	chr9	protein_coding	aminolevulinic acid synthase 1
chr9	106124177	106124984	-	106124177	106124373	5pMXE	0.5	50	50	ENSMUST00000112524.9	ENSMUSG00000032786.17	Alas1	chr9	protein_coding	aminolevulinic acid synthase 1
chr9	106115435	106115842	-	106115438	106115842	A3SS	0.33	50	50	ENSMUST00000112524.9	ENSMUSG00000032786.17	Alas1	chr9	protein_coding	aminolevulinic acid synthase 1
chr9	106120591	106123958	-	106120594	106123958	A3SS	0.5	50	50	ENSMUST00000112524.9	ENSMUSG00000032786.17	Alas1	chr9	protein_coding	aminolevulinic acid synthase 1
chr9	106113907	106115168	-	106113907	106115274	A5SS	0.33	50	50	ENSMUST00000112524.9	ENSMUSG00000032786.17	Alas1	chr9	protein_coding	aminolevulinic acid synthase 1
chr9	106120594	106120754	-	106120594	106123958	A5SS	0.5	50	50	ENSMUST00000112524.9	ENSMUSG00000032786.17	Alas1	chr9	protein_coding	aminolevulinic acid synthase 1
chr9	106113907	106115842	-	106113907;106115435	106115274;106115842	ES	0.33	50	50	ENSMUST00000074082.13	ENSMUSG00000032786.17	Alas1	chr9	protein_coding	aminolevulinic acid synthase 1
chr9	106113907	106115842	-	106113907;106115438	106115168;106115842	ES	0.33	50	50	ENSMUST00000143125.2	ENSMUSG00000032786.17	Alas1	chr9	protein_coding	aminolevulinic acid synthase 1
chr9	106113907;106115435	106115168;106115842	-	106113907	106115842	cassetteExon	0.5	100	100	ENSMUST00000214989.2	ENSMUSG00000032786.17	Alas1	chr9	protein_coding	aminolevulinic acid synthase 1
chr9	106113907	106115842	-	106115438	106115842	3pMXE	0.33	50	50	ENSMUST00000214249.2	ENSMUSG00000032786.17	Alas1	chr9	protein_coding	aminolevulinic acid synthase 1
chr9	106116915	106118835	-	106116915	106118315	A5SS	0.5	50	50	ENSMUST00000214249.2	ENSMUSG00000032786.17	Alas1	chr9	protein_coding	aminolevulinic acid synthase 1
chr9	106116915	106118835	-	106118537	106118835	3pMXE	0.5	50	50	ENSMUST00000219340.2	ENSMUSG00000032786.17	Alas1	chr9	protein_coding	aminolevulinic acid synthase 1
chr9	106185232	106226881	+	106185232;106207215	106207072;106226881	ES	0.5	50	50	ENSMUST00000072206.14	ENSMUSG00000023345.18	Poc1a	chr9	protein_coding	POC1 centriolar protein A
chr9	106185232;106202715	106202588;106207072	+	106185232	106207072	cassetteExon	0.5	100	100	ENSMUST00000072206.14	ENSMUSG00000023345.18	Poc1a	chr9	protein_coding	POC1 centriolar protein A
chr9	106185232;106203525	106203483;106207072	+	106185232	106207072	cassetteExon	0.5	100	100	ENSMUST00000072206.14	ENSMUSG00000023345.18	Poc1a	chr9	protein_coding	POC1 centriolar protein A
chr9	106158655	106160054	+	106158655	106160051	A3SS	0.5	50	50	ENSMUST00000072206.14	ENSMUSG00000023345.18	Poc1a	chr9	protein_coding	POC1 centriolar protein A
chr9	106185232	106207100	+	106185232	106207072	A3SS	0.2	50	50	ENSMUST00000072206.14	ENSMUSG00000023345.18	Poc1a	chr9	protein_coding	POC1 centriolar protein A
chr9	106158910	106160051	+	106158655	106160051	A5SS	0.25	50	50	ENSMUST00000072206.14	ENSMUSG00000023345.18	Poc1a	chr9	protein_coding	POC1 centriolar protein A
chr9	106158926	106160051	+	106158655	106160051	A5SS	0.25	50	50	ENSMUST00000072206.14	ENSMUSG00000023345.18	Poc1a	chr9	protein_coding	POC1 centriolar protein A
chr9	106158950	106160051	+	106158655	106160051	A5SS	0.25	50	50	ENSMUST00000072206.14	ENSMUSG00000023345.18	Poc1a	chr9	protein_coding	POC1 centriolar protein A
chr9	106168278	106172340	+	106165305	106172340	A5SS	0.5	50	50	ENSMUST00000072206.14	ENSMUSG00000023345.18	Poc1a	chr9	protein_coding	POC1 centriolar protein A
chr9	106178635	106182464	+	106172473	106182464	A5SS	0.5	50	50	ENSMUST00000072206.14	ENSMUSG00000023345.18	Poc1a	chr9	protein_coding	POC1 centriolar protein A
chr9	106205118	106207072	+	106185232	106207072	A5SS	0.25	50	50	ENSMUST00000072206.14	ENSMUSG00000023345.18	Poc1a	chr9	protein_coding	POC1 centriolar protein A
chr9	106185232;106207215	106207100;106226881	+	106185232	106226881	cassetteExon	0.5	100	100	ENSMUST00000191434.2	ENSMUSG00000023345.18	Poc1a	chr9	protein_coding	POC1 centriolar protein A
chr9	106185232	106202588	+	106185232	106226881	A3SS	0.2	50	50	ENSMUST00000191434.2	ENSMUSG00000023345.18	Poc1a	chr9	protein_coding	POC1 centriolar protein A
chr9	106185232	106203483	+	106185232	106226881	A3SS	0.2	50	50	ENSMUST00000191434.2	ENSMUSG00000023345.18	Poc1a	chr9	protein_coding	POC1 centriolar protein A
chr9	106158910	106160051	+	106158926	106160051	A5SS	0.25	50	50	ENSMUST00000216228.2	ENSMUSG00000023345.18	Poc1a	chr9	protein_coding	POC1 centriolar protein A
chr9	106158950	106160051	+	106158926	106160051	A5SS	0.25	50	50	ENSMUST00000216228.2	ENSMUSG00000023345.18	Poc1a	chr9	protein_coding	POC1 centriolar protein A
chr9	106185232;106203525	106203483;106207072	+	106185232;106202715	106202588;106207072	MXE	0.5	100	100	ENSMUST00000214540.2	ENSMUSG00000023345.18	Poc1a	chr9	protein_coding	POC1 centriolar protein A
chr9	106185232	106207100	+	106185232	106202588	A3SS&ES	0.2	50	50	ENSMUST00000214540.2	ENSMUSG00000023345.18	Poc1a	chr9	protein_coding	POC1 centriolar protein A
chr9	106158910	106160051	+	106158950	106160051	A5SS	0.25	50	50	ENSMUST00000214540.2	ENSMUSG00000023345.18	Poc1a	chr9	protein_coding	POC1 centriolar protein A
chr9	106205118	106207072	+	106202715	106207072	A5SS	0.25	50	50	ENSMUST00000214540.2	ENSMUSG00000023345.18	Poc1a	chr9	protein_coding	POC1 centriolar protein A
chr9	106185232	106207100	+	106185232;106203525	106203483;106207100	ES	0.5	50	50	ENSMUST00000214483.2	ENSMUSG00000023345.18	Poc1a	chr9	protein_coding	POC1 centriolar protein A
chr9	106185232	106202588	+	106185232	106203483	A3SS	0.2	50	50	ENSMUST00000214483.2	ENSMUSG00000023345.18	Poc1a	chr9	protein_coding	POC1 centriolar protein A
chr9	106185232	106207072	+	106185232	106203483	A3SS&ES	0.2	50	50	ENSMUST00000214483.2	ENSMUSG00000023345.18	Poc1a	chr9	protein_coding	POC1 centriolar protein A
chr9	106203525	106207072	+	106203525	106207100	A3SS	0.5	50	50	ENSMUST00000214483.2	ENSMUSG00000023345.18	Poc1a	chr9	protein_coding	POC1 centriolar protein A
chr9	106185232	106207100	+	106185232	106203483	A3SS&ES	0.2	50	50	ENSMUST00000216306.2	ENSMUSG00000023345.18	Poc1a	chr9	protein_coding	POC1 centriolar protein A
chr9	106205118	106207072	+	106203525	106207072	A5SS	0.25	50	50	ENSMUST00000216306.2	ENSMUSG00000023345.18	Poc1a	chr9	protein_coding	POC1 centriolar protein A
chr9	106248334	106250790	+	106248334	106250838	A3SS	0.5	50	50	ENSMUST00000172306.3	ENSMUSG00000053716.10	Dusp7	chr9	protein_coding	dual specificity phosphatase 7
chr9	106246905	106247900	+	106246522	106247900	A5SS	0.5	50	50	ENSMUST00000172306.3	ENSMUSG00000053716.10	Dusp7	chr9	protein_coding	dual specificity phosphatase 7
chr9	106306775	106307175	+	106306775	106307169	A3SS	0.5	50	50	ENSMUST00000150576.8	ENSMUSG00000048758.15	Rpl29	chr9	protein_coding	ribosomal protein L29
chr9	106306838	106307169	+	106306775	106307169	A5SS	0.33	50	50	ENSMUST00000150576.8	ENSMUSG00000048758.15	Rpl29	chr9	protein_coding	ribosomal protein L29
chr9	106307012	106307169	+	106306775	106307169	A5SS	0.33	50	50	ENSMUST00000150576.8	ENSMUSG00000048758.15	Rpl29	chr9	protein_coding	ribosomal protein L29
chr9	106307012	106307169	+	106306838	106307169	A5SS	0.33	50	50	ENSMUST00000059802.7	ENSMUSG00000048758.15	Rpl29	chr9	protein_coding	ribosomal protein L29
chr9	106313419	106314088	-	106313419;106313999	106313895;106314088	ES	0.5	50	50	ENSMUST00000190851.3	ENSMUSG00000023262.14	Acy1	chr9	protein_coding	aminoacylase 1
chr9	106311797	106312295	-	106312213	106312295	A3SS&ES	0.5	50	50	ENSMUST00000190851.3	ENSMUSG00000023262.14	Acy1	chr9	protein_coding	aminoacylase 1
chr9	106313208	106313325	-	106313059	106313325	A3SS	0.5	50	50	ENSMUST00000190851.3	ENSMUSG00000023262.14	Acy1	chr9	protein_coding	aminoacylase 1
chr9	106314936	106315332	-	106314932	106315332	A3SS	0.5	50	50	ENSMUST00000190851.3	ENSMUSG00000023262.14	Acy1	chr9	protein_coding	aminoacylase 1
chr9	106312723	106313374	-	106312723	106312814	A5SS&ES	0.5	50	50	ENSMUST00000190851.3	ENSMUSG00000023262.14	Acy1	chr9	protein_coding	aminoacylase 1
chr9	106312028	106312667	-	106312028;106312368	106312164;106312667	ES	0.5	50	50	ENSMUST00000189097.7	ENSMUSG00000023262.14	Acy1	chr9	protein_coding	aminoacylase 1
chr9	106313419	106314088	-	106313999	106314088	A3SS	0.5	50	50	ENSMUST00000189097.7	ENSMUSG00000023262.14	Acy1	chr9	protein_coding	aminoacylase 1
chr9	106313419	106314828	-	106314152	106314828	A3SS&ES	0.5	50	50	ENSMUST00000189097.7	ENSMUSG00000023262.14	Acy1	chr9	protein_coding	aminoacylase 1
chr9	106311797	106312295	-	106311797	106311884	A5SS&ES	0.5	50	50	ENSMUST00000189097.7	ENSMUSG00000023262.14	Acy1	chr9	protein_coding	aminoacylase 1
chr9	106313419	106314828	-	106313419;106314152	106314088;106314828	ES	0.5	50	50	ENSMUST00000214275.2	ENSMUSG00000023262.14	Acy1	chr9	protein_coding	aminoacylase 1
chr9	106311797;106312028	106311884;106312667	-	106311797;106312368	106312295;106312667	MXE	0.5	100	100	ENSMUST00000215395.2	ENSMUSG00000023262.14	Acy1	chr9	protein_coding	aminoacylase 1
chr9	106311797;106312213	106311884;106312295	-	106311797	106312295	cassetteExon	0.5	100	100	ENSMUST00000215395.2	ENSMUSG00000023262.14	Acy1	chr9	protein_coding	aminoacylase 1
chr9	106313419;106314152	106313895;106314828	-	106313419	106314828	cassetteExon	0.5	100	100	ENSMUST00000190803.2	ENSMUSG00000023262.14	Acy1	chr9	protein_coding	aminoacylase 1
chr9	106312028	106312667	-	106312368	106312667	3pMXE	0.5	50	50	ENSMUST00000190972.3	ENSMUSG00000023262.14	Acy1	chr9	protein_coding	aminoacylase 1
chr9	106318109	106321026	-	106318055	106321026	A3SS	0.5	50	50	ENSMUST00000048685.13	ENSMUSG00000042210.18	Abhd14a	chr9	protein_coding	abhydrolase domain containing 14A
chr9	106322855	106322970	-	106322850	106322970	A3SS	0.5	50	50	ENSMUST00000048685.13	ENSMUSG00000042210.18	Abhd14a	chr9	protein_coding	abhydrolase domain containing 14A
chr9	106323033	106324730	-	106323028	106324730	A3SS	0.33	50	50	ENSMUST00000048685.13	ENSMUSG00000042210.18	Abhd14a	chr9	protein_coding	abhydrolase domain containing 14A
chr9	106318055	106321005	-	106318055	106321026	A5SS	0.5	50	50	ENSMUST00000048685.13	ENSMUSG00000042210.18	Abhd14a	chr9	protein_coding	abhydrolase domain containing 14A
chr9	106321505	106321983	-	106321505	106322725	A5SS	0.33	50	50	ENSMUST00000048685.13	ENSMUSG00000042210.18	Abhd14a	chr9	protein_coding	abhydrolase domain containing 14A
chr9	106323028	106324588	-	106323028	106324730	A5SS	0.5	50	50	ENSMUST00000048685.13	ENSMUSG00000042210.18	Abhd14a	chr9	protein_coding	abhydrolase domain containing 14A
chr9	106321505	106324730	-	106321505;106323033	106322725;106324730	ES	0.33	50	50	ENSMUST00000171678.9	ENSMUSG00000042210.18	Abhd14a	chr9	protein_coding	abhydrolase domain containing 14A
chr9	106323033	106324570	-	106323033	106324730	A5SS	0.5	50	50	ENSMUST00000171678.9	ENSMUSG00000042210.18	Abhd14a	chr9	protein_coding	abhydrolase domain containing 14A
chr9	106321505;106323028	106322725;106324730	-	106321505	106324730	cassetteExon	0.5	100	100	ENSMUST00000171925.8	ENSMUSG00000042210.18	Abhd14a	chr9	protein_coding	abhydrolase domain containing 14A
chr9	106321505	106321983	-	106321505	106324730	A5SS	0.33	50	50	ENSMUST00000171925.8	ENSMUSG00000042210.18	Abhd14a	chr9	protein_coding	abhydrolase domain containing 14A
chr9	106325023;106325493	106325411;106327203	+	106325023	106327203	cassetteExon	0.5	100	100	ENSMUST00000216130.2	ENSMUSG00000042073.16	Abhd14b	chr9	protein_coding	abhydrolase domain containing 14b
chr9	106325023;106325527	106325411;106327203	+	106325023	106327203	cassetteExon	0.5	100	100	ENSMUST00000216130.2	ENSMUSG00000042073.16	Abhd14b	chr9	protein_coding	abhydrolase domain containing 14b
chr9	106325023;106325908	106325411;106327203	+	106325023	106327203	cassetteExon	0.5	100	100	ENSMUST00000216130.2	ENSMUSG00000042073.16	Abhd14b	chr9	protein_coding	abhydrolase domain containing 14b
chr9	106325023;106325908	106325411;106328592	+	106325023;106327430	106327203;106328592	MXE	0.5	100	100	ENSMUST00000216130.2	ENSMUSG00000042073.16	Abhd14b	chr9	protein_coding	abhydrolase domain containing 14b
chr9	106325130	106328592	+	106327430	106328592	A5SS&ES	0.33	50	50	ENSMUST00000216130.2	ENSMUSG00000042073.16	Abhd14b	chr9	protein_coding	abhydrolase domain containing 14b
chr9	106326001	106327203	+	106325023	106327203	A5SS	0.2	50	50	ENSMUST00000216130.2	ENSMUSG00000042073.16	Abhd14b	chr9	protein_coding	abhydrolase domain containing 14b
chr9	106325908	106328592	+	106325130	106328592	A5SS	0.33	50	50	ENSMUST00000215475.2	ENSMUSG00000042073.16	Abhd14b	chr9	protein_coding	abhydrolase domain containing 14b
chr9	106325493	106327203	+	106325527	106327203	A5SS	0.2	50	50	ENSMUST00000187106.7	ENSMUSG00000042073.16	Abhd14b	chr9	protein_coding	abhydrolase domain containing 14b
chr9	106325908	106327203	+	106325527	106327203	A5SS	0.2	50	50	ENSMUST00000187106.7	ENSMUSG00000042073.16	Abhd14b	chr9	protein_coding	abhydrolase domain containing 14b
chr9	106325908	106328592	+	106327430	106328592	A5SS&ES	0.33	50	50	ENSMUST00000187106.7	ENSMUSG00000042073.16	Abhd14b	chr9	protein_coding	abhydrolase domain containing 14b
chr9	106326001	106327203	+	106325527	106327203	A5SS	0.2	50	50	ENSMUST00000187106.7	ENSMUSG00000042073.16	Abhd14b	chr9	protein_coding	abhydrolase domain containing 14b
chr9	106325908	106327203	+	106325493	106327203	A5SS	0.2	50	50	ENSMUST00000190167.7	ENSMUSG00000042073.16	Abhd14b	chr9	protein_coding	abhydrolase domain containing 14b
chr9	106326001	106327203	+	106325493	106327203	A5SS	0.2	50	50	ENSMUST00000190167.7	ENSMUSG00000042073.16	Abhd14b	chr9	protein_coding	abhydrolase domain containing 14b
chr9	106325023	106327203	+	106325493	106327203	5pMXE	0.2	50	50	ENSMUST00000186361.7	ENSMUSG00000042073.16	Abhd14b	chr9	protein_coding	abhydrolase domain containing 14b
chr9	106325908	106328592	+	106325908;106327430	106327113;106328592	ES	0.5	50	50	ENSMUST00000185347.8	ENSMUSG00000042073.16	Abhd14b	chr9	protein_coding	abhydrolase domain containing 14b
chr9	106325908	106327203	+	106325908	106327113	A3SS	0.33	50	50	ENSMUST00000185347.8	ENSMUSG00000042073.16	Abhd14b	chr9	protein_coding	abhydrolase domain containing 14b
chr9	106325023	106327203	+	106325908	106327203	5pMXE	0.2	50	50	ENSMUST00000048527.15	ENSMUSG00000042073.16	Abhd14b	chr9	protein_coding	abhydrolase domain containing 14b
chr9	106325908	106328592	+	106325908;106327430	106327203;106328592	ES	0.5	50	50	ENSMUST00000048527.15	ENSMUSG00000042073.16	Abhd14b	chr9	protein_coding	abhydrolase domain containing 14b
chr9	106326001	106327203	+	106325908	106327203	A5SS	0.2	50	50	ENSMUST00000048527.15	ENSMUSG00000042073.16	Abhd14b	chr9	protein_coding	abhydrolase domain containing 14b
chr9	106337628	106338192	+	106337628;106337966	106337850;106338192	ES	0.5	50	50	ENSMUST00000185874.7	ENSMUSG00000023495.14	Pcbp4	chr9	protein_coding	poly(rC) binding protein 4
chr9	106331206;106333642	106333481;106337204	+	106331206	106337204	cassetteExon	0.5	100	100	ENSMUST00000185874.7	ENSMUSG00000023495.14	Pcbp4	chr9	protein_coding	poly(rC) binding protein 4
chr9	106331206	106331589	+	106331206	106337204	A3SS	0.25	50	50	ENSMUST00000185874.7	ENSMUSG00000023495.14	Pcbp4	chr9	protein_coding	poly(rC) binding protein 4
chr9	106331206	106337238	+	106331206	106337204	A3SS	0.25	50	50	ENSMUST00000185874.7	ENSMUSG00000023495.14	Pcbp4	chr9	protein_coding	poly(rC) binding protein 4
chr9	106337966	106338273	+	106337966	106338192	A3SS	0.5	50	50	ENSMUST00000185874.7	ENSMUSG00000023495.14	Pcbp4	chr9	protein_coding	poly(rC) binding protein 4
chr9	106338323	106339048	+	106338323;106338592	106338464;106339048	ES	0.5	50	50	ENSMUST00000024260.14	ENSMUSG00000023495.14	Pcbp4	chr9	protein_coding	poly(rC) binding protein 4
chr9	106339451	106339707	+	106339451;106339613	106339561;106339707	ES	0.5	50	50	ENSMUST00000024260.14	ENSMUSG00000023495.14	Pcbp4	chr9	protein_coding	poly(rC) binding protein 4
chr9	106339451	106339542	+	106339451	106339561	A3SS	0.33	50	50	ENSMUST00000024260.14	ENSMUSG00000023495.14	Pcbp4	chr9	protein_coding	poly(rC) binding protein 4
chr9	106339613	106339684	+	106339613	106339707	A3SS	0.33	50	50	ENSMUST00000024260.14	ENSMUSG00000023495.14	Pcbp4	chr9	protein_coding	poly(rC) binding protein 4
chr9	106339613	106339734	+	106339613	106339707	A3SS	0.33	50	50	ENSMUST00000024260.14	ENSMUSG00000023495.14	Pcbp4	chr9	protein_coding	poly(rC) binding protein 4
chr9	106339876	106340527	+	106339876	106340330	A3SS	0.5	50	50	ENSMUST00000024260.14	ENSMUSG00000023495.14	Pcbp4	chr9	protein_coding	poly(rC) binding protein 4
chr9	106339096	106339268	+	106339122	106339268	A5SS	0.5	50	50	ENSMUST00000024260.14	ENSMUSG00000023495.14	Pcbp4	chr9	protein_coding	poly(rC) binding protein 4
chr9	106331206	106333481	+	106331206	106331589	3pMXE	0.25	50	50	ENSMUST00000187975.2	ENSMUSG00000023495.14	Pcbp4	chr9	protein_coding	poly(rC) binding protein 4
chr9	106331206	106337238	+	106331206	106331589	3pMXE	0.25	50	50	ENSMUST00000187975.2	ENSMUSG00000023495.14	Pcbp4	chr9	protein_coding	poly(rC) binding protein 4
chr9	106338323	106339048	+	106338323	106338464	3pMXE	0.5	50	50	ENSMUST00000216379.2	ENSMUSG00000023495.14	Pcbp4	chr9	protein_coding	poly(rC) binding protein 4
chr9	106331206	106333481	+	106331206	106337238	A3SS	0.25	50	50	ENSMUST00000216379.2	ENSMUSG00000023495.14	Pcbp4	chr9	protein_coding	poly(rC) binding protein 4
chr9	106331206	106337204	+	106333642	106337204	5pMXE	0.5	50	50	ENSMUST00000190430.2	ENSMUSG00000023495.14	Pcbp4	chr9	protein_coding	poly(rC) binding protein 4
chr9	106337628	106338192	+	106337628	106337850	3pMXE	0.5	50	50	ENSMUST00000190799.2	ENSMUSG00000023495.14	Pcbp4	chr9	protein_coding	poly(rC) binding protein 4
chr9	106339613	106339734	+	106339613	106339684	A3SS	0.33	50	50	ENSMUST00000217405.2	ENSMUSG00000023495.14	Pcbp4	chr9	protein_coding	poly(rC) binding protein 4
chr9	106339451	106339707	+	106339451;106339613	106339542;106339707	ES	0.5	50	50	ENSMUST00000185507.7	ENSMUSG00000023495.14	Pcbp4	chr9	protein_coding	poly(rC) binding protein 4
chr9	106338323	106339048	+	106338592	106339048	5pMXE	0.5	50	50	ENSMUST00000189882.2	ENSMUSG00000023495.14	Pcbp4	chr9	protein_coding	poly(rC) binding protein 4
chr9	106339451	106339707	+	106339451	106339561	A3SS&ES	0.33	50	50	ENSMUST00000213752.2	ENSMUSG00000023495.14	Pcbp4	chr9	protein_coding	poly(rC) binding protein 4
chr9	106339451	106339707	+	106339613	106339707	A5SS	0.5	50	50	ENSMUST00000188448.2	ENSMUSG00000023495.14	Pcbp4	chr9	protein_coding	poly(rC) binding protein 4
chr9	106350718	106351257	-	106350718;106351032	106350880;106351257	ES	0.5	50	50	ENSMUST00000067218.14	ENSMUSG00000023249.16	Parp3	chr9	protein_coding	poly (ADP-ribose) polymerase family, member 3
chr9	106351734	106351879	-	106351719	106351879	A3SS	0.5	50	50	ENSMUST00000067218.14	ENSMUSG00000023249.16	Parp3	chr9	protein_coding	poly (ADP-ribose) polymerase family, member 3
chr9	106353181	106353281	-	106353181	106353692	A5SS	0.33	50	50	ENSMUST00000067218.14	ENSMUSG00000023249.16	Parp3	chr9	protein_coding	poly (ADP-ribose) polymerase family, member 3
chr9	106353181	106353524	-	106353181	106353692	A5SS	0.33	50	50	ENSMUST00000067218.14	ENSMUSG00000023249.16	Parp3	chr9	protein_coding	poly (ADP-ribose) polymerase family, member 3
chr9	106353181	106353524	-	106353181	106353281	A5SS	0.33	50	50	ENSMUST00000123555.8	ENSMUSG00000023249.16	Parp3	chr9	protein_coding	poly (ADP-ribose) polymerase family, member 3
chr9	106350718	106351257	-	106351032	106351257	A3SS	0.5	50	50	ENSMUST00000145396.8	ENSMUSG00000023249.16	Parp3	chr9	protein_coding	poly (ADP-ribose) polymerase family, member 3
chr9	106354633	106354870	+	106353193	106354870	A5SS	0.5	50	50	ENSMUST00000123464.8	ENSMUSG00000041506.16	Rrp9	chr9	protein_coding	ribosomal RNA processing 9, U3 small nucleolar RNA binding protein
chr9	106361555	106362276	+	106361555;106361718	106361639;106362276	ES	0.5	50	50	ENSMUST00000047721.10	ENSMUSG00000041506.16	Rrp9	chr9	protein_coding	ribosomal RNA processing 9, U3 small nucleolar RNA binding protein
chr9	106359230	106360111	+	106359085	106360111	A5SS	0.5	50	50	ENSMUST00000047721.10	ENSMUSG00000041506.16	Rrp9	chr9	protein_coding	ribosomal RNA processing 9, U3 small nucleolar RNA binding protein
chr9	106377240;106377801	106377697;106378996	+	106377240	106378996	cassetteExon	0.5	100	100	ENSMUST00000164965.3	ENSMUSG00000066383.8	Iqcf1	chr9	protein_coding	IQ motif containing F1
chr9	106378812	106378996	+	106377240	106378996	A5SS	0.33	50	50	ENSMUST00000164965.3	ENSMUSG00000066383.8	Iqcf1	chr9	protein_coding	IQ motif containing F1
chr9	106377801;106378812	106378713;106378996	+	106377801	106378996	cassetteExon	0.5	100	100	ENSMUST00000085114.8	ENSMUSG00000066383.8	Iqcf1	chr9	protein_coding	IQ motif containing F1
chr9	106421645	106429938	-	106421645	106421817	5pMXE	0.33	50	50	ENSMUST00000189866.2	ENSMUSG00000118396.3	IQCF2	chr9	protein_coding	--
chr9	106421645	106430781	-	106421645	106421817	5pMXE	0.33	50	50	ENSMUST00000189866.2	ENSMUSG00000118396.3	IQCF2	chr9	protein_coding	--
chr9	106402737	106404155	-	106382340	106404155	A3SS	0.5	50	50	ENSMUST00000189866.2	ENSMUSG00000118396.3	IQCF2	chr9	protein_coding	--
chr9	106421057	106421598	-	106404217	106421598	A3SS	0.5	50	50	ENSMUST00000189866.2	ENSMUSG00000118396.3	IQCF2	chr9	protein_coding	--
chr9	106421645	106430781	-	106421645;106430119	106429938;106430781	ES	0.5	50	50	ENSMUST00000062917.16	ENSMUSG00000118396.3	IQCF2	chr9	protein_coding	--
chr9	106430119	106431322	-	106430119;106430867	106430781;106431322	ES	0.5	50	50	ENSMUST00000062917.16	ENSMUSG00000118396.3	IQCF2	chr9	protein_coding	--
chr9	106431426	106438150	-	106431426;106434764	106434660;106438150	ES	0.33	50	50	ENSMUST00000062917.16	ENSMUSG00000118396.3	IQCF2	chr9	protein_coding	--
chr9	106434761	106438150	-	106434764	106438150	A3SS	0.33	50	50	ENSMUST00000062917.16	ENSMUSG00000118396.3	IQCF2	chr9	protein_coding	--
chr9	106421645;106430119	106429938;106431322	-	106421645;106430867	106430781;106431322	MXE	0.5	100	100	ENSMUST00010181659.1	ENSMUSG00001074846.1	Iqcf3	chr9	protein_coding	--
chr9	106430119	106431322	-	106430867	106431322	3pMXE	0.5	50	50	ENSMUST00010126732.2	ENSMUSG00001074846.1	Iqcf3	chr9	protein_coding	--
chr9	106431426	106438150	-	106431426;106434761	106434660;106438150	ES	0.33	50	50	ENSMUST00010126732.2	ENSMUSG00001074846.1	Iqcf3	chr9	protein_coding	--
chr9	106522290	106522496	-	106521340	106522496	A3SS	0.5	50	50	ENSMUST00000200826.4	ENSMUSG00000023192.13	Grm2	chr9	protein_coding	glutamate receptor, metabotropic 2
chr9	106522676	106523654	-	106522676	106524350	A5SS	0.5	50	50	ENSMUST00000200826.4	ENSMUSG00000023192.13	Grm2	chr9	protein_coding	glutamate receptor, metabotropic 2
chr9	106550937	106562128	-	106550937;106559362	106559067;106562128	ES	0.5	50	50	ENSMUST00000169068.8	ENSMUSG00000040813.17	Tex264	chr9	protein_coding	testis expressed gene 264
chr9	106562194	106563034	-	106562194	106562834	5pMXE	0.25	50	50	ENSMUST00000169068.8	ENSMUSG00000040813.17	Tex264	chr9	protein_coding	testis expressed gene 264
chr9	106555309	106559067	-	106550937	106559067	A3SS	0.5	50	50	ENSMUST00000169068.8	ENSMUSG00000040813.17	Tex264	chr9	protein_coding	testis expressed gene 264
chr9	106539727	106540400	-	106539727	106550716	A5SS	0.5	50	50	ENSMUST00000169068.8	ENSMUSG00000040813.17	Tex264	chr9	protein_coding	testis expressed gene 264
chr9	106550937	106562146	-	106550937	106559067	A5SS&ES	0.33	50	50	ENSMUST00000169068.8	ENSMUSG00000040813.17	Tex264	chr9	protein_coding	testis expressed gene 264
chr9	106559362	106562146	-	106559362	106562128	A5SS	0.5	50	50	ENSMUST00000169068.8	ENSMUSG00000040813.17	Tex264	chr9	protein_coding	testis expressed gene 264
chr9	106562194	106562443	-	106562194	106562834	A5SS	0.25	50	50	ENSMUST00000169068.8	ENSMUSG00000040813.17	Tex264	chr9	protein_coding	testis expressed gene 264
chr9	106562194	106562817	-	106562194	106562834	A5SS	0.25	50	50	ENSMUST00000169068.8	ENSMUSG00000040813.17	Tex264	chr9	protein_coding	testis expressed gene 264
chr9	106562194	106563034	-	106562194	106562443	5pMXE	0.25	50	50	ENSMUST00000163441.8	ENSMUSG00000040813.17	Tex264	chr9	protein_coding	testis expressed gene 264
chr9	106562194	106562817	-	106562194	106562443	A5SS	0.25	50	50	ENSMUST00000163441.8	ENSMUSG00000040813.17	Tex264	chr9	protein_coding	testis expressed gene 264
chr9	106562194	106562817	-	106562194	106563034	A5SS	0.25	50	50	ENSMUST00000046735.11	ENSMUSG00000040813.17	Tex264	chr9	protein_coding	testis expressed gene 264
chr9	106550937	106563034	-	106550937;106562194	106562146;106563034	ES	0.5	50	50	ENSMUST00000185257.7	ENSMUSG00000040813.17	Tex264	chr9	protein_coding	testis expressed gene 264
chr9	106550937;106559362	106559067;106562146	-	106550937	106562146	cassetteExon	0.5	100	100	ENSMUST00000185257.7	ENSMUSG00000040813.17	Tex264	chr9	protein_coding	testis expressed gene 264
chr9	106550937	106562128	-	106550937	106562146	A5SS	0.25	50	50	ENSMUST00000185257.7	ENSMUSG00000040813.17	Tex264	chr9	protein_coding	testis expressed gene 264
chr9	106550937	106563034	-	106550937	106562128	A5SS&ES	0.25	50	50	ENSMUST00000188892.7	ENSMUSG00000040813.17	Tex264	chr9	protein_coding	testis expressed gene 264
chr9	106550937;106562194	106562128;106563034	-	106550937	106563034	cassetteExon	0.5	100	100	ENSMUST00000188120.2	ENSMUSG00000040813.17	Tex264	chr9	protein_coding	testis expressed gene 264
chr9	106550937	106559067	-	106550937	106563034	A5SS	0.25	50	50	ENSMUST00000188120.2	ENSMUSG00000040813.17	Tex264	chr9	protein_coding	testis expressed gene 264
chr9	106599406	106599915	-	106597663	106599915	A3SS	0.5	50	50	ENSMUST00000046502.7	ENSMUSG00000040661.7	Rad54l2	chr9	protein_coding	RAD54 like 2 (S. cerevisiae)
chr9	106742898;106751507	106751255;106757133	+	106742898	106757133	cassetteExon	0.5	100	100	ENSMUST00000159645.8	ENSMUSG00000040325.17	Dcaf1	chr9	protein_coding	DDB1 and CUL4 associated factor 1
chr9	106741819	106742212	+	106741819	106742230	A3SS	0.5	50	50	ENSMUST00000159645.8	ENSMUSG00000040325.17	Dcaf1	chr9	protein_coding	DDB1 and CUL4 associated factor 1
chr9	106751507	106757136	+	106751507	106757133	A3SS	0.5	50	50	ENSMUST00000055009.15	ENSMUSG00000040325.17	Dcaf1	chr9	protein_coding	DDB1 and CUL4 associated factor 1
chr9	106746560	106747402	-	106715656	106747402	A3SS	0.5	50	50	ENSMUST00000159620.9	ENSMUSG00000032575.17	Manf	chr9	protein_coding	mesencephalic astrocyte-derived neurotrophic factor
chr9	106766424	106767360	-	106747471	106767360	A3SS	0.33	50	50	ENSMUST00000159620.9	ENSMUSG00000032575.17	Manf	chr9	protein_coding	mesencephalic astrocyte-derived neurotrophic factor
chr9	106766465	106767360	-	106747471	106767360	A3SS	0.33	50	50	ENSMUST00000159620.9	ENSMUSG00000032575.17	Manf	chr9	protein_coding	mesencephalic astrocyte-derived neurotrophic factor
chr9	106766465	106767360	-	106766424	106767360	A3SS	0.33	50	50	ENSMUST00000159283.8	ENSMUSG00000032575.17	Manf	chr9	protein_coding	mesencephalic astrocyte-derived neurotrophic factor
chr9	106770033	106772311	+	106770033	106770647	3pMXE	0.5	50	50	ENSMUST00000161822.2	ENSMUSG00000090207.3	4930524O07Rik	chr9	lncRNA	RIKEN cDNA 4930524O07 gene
chr9	106818577	106821106	-	106818577;106818723	106818697;106821106	ES	0.5	50	50	ENSMUST00000044532.11	ENSMUSG00000039716.13	Dock3	chr9	protein_coding	dedicator of cyto-kinesis 3
chr9	107012041	107056280	-	107012041;107036654	107036614;107056280	ES	0.5	50	50	ENSMUST00000044532.11	ENSMUSG00000039716.13	Dock3	chr9	protein_coding	dedicator of cyto-kinesis 3
chr9	106774017;106774656	106774534;106777906	-	106774017	106777906	cassetteExon	0.5	100	100	ENSMUST00000044532.11	ENSMUSG00000039716.13	Dock3	chr9	protein_coding	dedicator of cyto-kinesis 3
chr9	106783913	106784429	-	106783979	106784429	A3SS	0.5	50	50	ENSMUST00000044532.11	ENSMUSG00000039716.13	Dock3	chr9	protein_coding	dedicator of cyto-kinesis 3
chr9	106785736	106785849	-	106785736	106788450	A5SS	0.5	50	50	ENSMUST00000044532.11	ENSMUSG00000039716.13	Dock3	chr9	protein_coding	dedicator of cyto-kinesis 3
chr9	106842004	106844318	-	106842004	106844276	A5SS	0.5	50	50	ENSMUST00000044532.11	ENSMUSG00000039716.13	Dock3	chr9	protein_coding	dedicator of cyto-kinesis 3
chr9	107134341	107135529	-	107134341;107134699	107134614;107135529	ES	0.5	50	50	ENSMUST00000035194.8	ENSMUSG00000032577.17	Mapkapk3	chr9	protein_coding	mitogen-activated protein kinase-activated protein kinase 3
chr9	107136269	107137244	-	107136088	107137244	A3SS	0.5	50	50	ENSMUST00000035194.8	ENSMUSG00000032577.17	Mapkapk3	chr9	protein_coding	mitogen-activated protein kinase-activated protein kinase 3
chr9	107162340	107166319	-	107140963	107166319	A3SS	0.5	50	50	ENSMUST00000035194.8	ENSMUSG00000032577.17	Mapkapk3	chr9	protein_coding	mitogen-activated protein kinase-activated protein kinase 3
chr9	107140963	107157845	-	107140963	107166319	A5SS	0.5	50	50	ENSMUST00000035194.8	ENSMUSG00000032577.17	Mapkapk3	chr9	protein_coding	mitogen-activated protein kinase-activated protein kinase 3
chr9	107134341	107136013	-	107134341;107135653	107135529;107136013	ES	0.5	50	50	ENSMUST00000143487.8	ENSMUSG00000032577.17	Mapkapk3	chr9	protein_coding	mitogen-activated protein kinase-activated protein kinase 3
chr9	107134341	107134614	-	107134341	107136013	A5SS	0.33	50	50	ENSMUST00000192054.2	ENSMUSG00000032577.17	Mapkapk3	chr9	protein_coding	mitogen-activated protein kinase-activated protein kinase 3
chr9	107174233	107177567	+	107174233;107177343	107177123;107177567	ES	0.5	50	50	ENSMUST00000085102.6	ENSMUSG00000032578.8	Cish	chr9	protein_coding	cytokine inducible SH2-containing protein
chr9	107176412	107177123	+	107174233	107177123	A5SS	0.5	50	50	ENSMUST00000085102.6	ENSMUSG00000032578.8	Cish	chr9	protein_coding	cytokine inducible SH2-containing protein
chr9	107174233	107177567	+	107177343	107177567	A5SS&ES	0.5	50	50	ENSMUST00000165664.2	ENSMUSG00000032578.8	Cish	chr9	protein_coding	cytokine inducible SH2-containing protein
chr9	107174233	107177567	+	107174233	107177123	A3SS&ES	0.5	50	50	ENSMUST00000167072.2	ENSMUSG00000032578.8	Cish	chr9	protein_coding	cytokine inducible SH2-containing protein
chr9	107206631	107207909	-	107206631	107207972	A5SS	0.33	50	50	ENSMUST00000035196.14	ENSMUSG00000032579.15	Hemk1	chr9	protein_coding	HemK methyltransferase family member 1
chr9	107214577	107215480	-	107206631	107215480	A3SS	0.5	50	50	ENSMUST00000118051.2	ENSMUSG00000032579.15	Hemk1	chr9	protein_coding	HemK methyltransferase family member 1
chr9	107206631	107207909	-	107206631	107215480	A5SS	0.33	50	50	ENSMUST00000118051.2	ENSMUSG00000032579.15	Hemk1	chr9	protein_coding	HemK methyltransferase family member 1
chr9	107206631	107207972	-	107206631	107215480	A5SS	0.33	50	50	ENSMUST00000118051.2	ENSMUSG00000032579.15	Hemk1	chr9	protein_coding	HemK methyltransferase family member 1
chr9	107395468;107396398	107396378;107399322	+	107395468	107399322	cassetteExon	0.5	100	100	ENSMUST00000010210.13	ENSMUSG00000010066.16	Cacna2d2	chr9	protein_coding	calcium channel, voltage-dependent, alpha 2/delta subunit 2
chr9	107390830	107390926	+	107390830	107391034	A3SS	0.5	50	50	ENSMUST00000010210.13	ENSMUSG00000010066.16	Cacna2d2	chr9	protein_coding	calcium channel, voltage-dependent, alpha 2/delta subunit 2
chr9	107395468	107399304	+	107395468	107399322	A3SS	0.33	50	50	ENSMUST00000010210.13	ENSMUSG00000010066.16	Cacna2d2	chr9	protein_coding	calcium channel, voltage-dependent, alpha 2/delta subunit 2
chr9	107402631	107402812	+	107402631	107402809	A3SS	0.5	50	50	ENSMUST00000010210.13	ENSMUSG00000010066.16	Cacna2d2	chr9	protein_coding	calcium channel, voltage-dependent, alpha 2/delta subunit 2
chr9	107404245	107404347	+	107404245	107404353	A3SS	0.5	50	50	ENSMUST00000010210.13	ENSMUSG00000010066.16	Cacna2d2	chr9	protein_coding	calcium channel, voltage-dependent, alpha 2/delta subunit 2
chr9	107382883	107383147	+	107374718	107383147	A5SS	0.5	50	50	ENSMUST00000010210.13	ENSMUSG00000010066.16	Cacna2d2	chr9	protein_coding	calcium channel, voltage-dependent, alpha 2/delta subunit 2
chr9	107395468	107399304	+	107395468	107396378	A3SS&ES	0.33	50	50	ENSMUST00000168532.8	ENSMUSG00000010066.16	Cacna2d2	chr9	protein_coding	calcium channel, voltage-dependent, alpha 2/delta subunit 2
chr9	107418239	107419234	-	107418239	107418696	5pMXE	0.5	50	50	ENSMUST00000041459.9	ENSMUSG00000037190.13	Cyb561d2	chr9	protein_coding	cytochrome b-561 domain containing 2
chr9	107418268	107418696	-	107418239	107418696	A3SS	0.5	50	50	ENSMUST00000041459.9	ENSMUSG00000037190.13	Cyb561d2	chr9	protein_coding	cytochrome b-561 domain containing 2
chr9	107418239	107419234	-	107418239;107418849	107418696;107419234	ES	0.5	50	50	ENSMUST00000195235.6	ENSMUSG00000037190.13	Cyb561d2	chr9	protein_coding	cytochrome b-561 domain containing 2
chr9	107418239	107419234	-	107418849	107419234	A3SS&ES	0.5	50	50	ENSMUST00000194967.2	ENSMUSG00000037190.13	Cyb561d2	chr9	protein_coding	cytochrome b-561 domain containing 2
chr9	107420814	107421376	+	107420814	107421350	A3SS	0.5	50	50	ENSMUST00000010201.9	ENSMUSG00000010057.9	Nprl2	chr9	protein_coding	NPR2 like, GATOR1 complex subunit
chr9	107424843	107424999	+	107424747	107424999	A5SS	0.5	50	50	ENSMUST00000010188.9	ENSMUSG00000010044.13	Zmynd10	chr9	protein_coding	zinc finger, MYND domain containing 10
chr9	107424747	107424999	+	107424747	107426079	A3SS	0.5	50	50	ENSMUST00000193303.6	ENSMUSG00000010044.13	Zmynd10	chr9	protein_coding	zinc finger, MYND domain containing 10
chr9	107425985	107426079	+	107424747	107426079	A5SS	0.5	50	50	ENSMUST00000193303.6	ENSMUSG00000010044.13	Zmynd10	chr9	protein_coding	zinc finger, MYND domain containing 10
chr9	107429045	107434652	+	107429045;107431443	107431337;107434652	ES	0.2	50	50	ENSMUST00000093786.9	ENSMUSG00000010067.14	Rassf1	chr9	protein_coding	Ras association (RalGDS/AF-6) domain family member 1
chr9	107429045	107431325	+	107429045	107431337	A3SS	0.33	50	50	ENSMUST00000093786.9	ENSMUSG00000010067.14	Rassf1	chr9	protein_coding	Ras association (RalGDS/AF-6) domain family member 1
chr9	107429049	107431337	+	107429045	107431337	A5SS	0.5	50	50	ENSMUST00000093786.9	ENSMUSG00000010067.14	Rassf1	chr9	protein_coding	Ras association (RalGDS/AF-6) domain family member 1
chr9	107432124	107434652	+	107431443	107434652	A5SS	0.2	50	50	ENSMUST00000093786.9	ENSMUSG00000010067.14	Rassf1	chr9	protein_coding	Ras association (RalGDS/AF-6) domain family member 1
chr9	107432917	107434652	+	107431443	107434652	A5SS	0.2	50	50	ENSMUST00000093786.9	ENSMUSG00000010067.14	Rassf1	chr9	protein_coding	Ras association (RalGDS/AF-6) domain family member 1
chr9	107433950	107434652	+	107431443	107434652	A5SS	0.2	50	50	ENSMUST00000093786.9	ENSMUSG00000010067.14	Rassf1	chr9	protein_coding	Ras association (RalGDS/AF-6) domain family member 1
chr9	107429045	107434652	+	107429045;107431443	107431325;107434652	ES	0.2	50	50	ENSMUST00000122225.8	ENSMUSG00000010067.14	Rassf1	chr9	protein_coding	Ras association (RalGDS/AF-6) domain family member 1
chr9	107432124	107434652	+	107429045	107434652	A5SS	0.2	50	50	ENSMUST00000156198.8	ENSMUSG00000010067.14	Rassf1	chr9	protein_coding	Ras association (RalGDS/AF-6) domain family member 1
chr9	107432917	107434652	+	107429045	107434652	A5SS	0.2	50	50	ENSMUST00000156198.8	ENSMUSG00000010067.14	Rassf1	chr9	protein_coding	Ras association (RalGDS/AF-6) domain family member 1
chr9	107433950	107434652	+	107429045	107434652	A5SS	0.2	50	50	ENSMUST00000156198.8	ENSMUSG00000010067.14	Rassf1	chr9	protein_coding	Ras association (RalGDS/AF-6) domain family member 1
chr9	107432917	107434652	+	107432124	107434652	A5SS	0.2	50	50	ENSMUST00000010211.7	ENSMUSG00000010067.14	Rassf1	chr9	protein_coding	Ras association (RalGDS/AF-6) domain family member 1
chr9	107433950	107434652	+	107432124	107434652	A5SS	0.2	50	50	ENSMUST00000010211.7	ENSMUSG00000010067.14	Rassf1	chr9	protein_coding	Ras association (RalGDS/AF-6) domain family member 1
chr9	107433950	107434652	+	107432917	107434652	A5SS	0.2	50	50	ENSMUST00000191832.6	ENSMUSG00000010067.14	Rassf1	chr9	protein_coding	Ras association (RalGDS/AF-6) domain family member 1
chr9	107441112;107444067	107443723;107445525	-	107441112	107445525	cassetteExon	0.5	100	100	ENSMUST00000180865.3	ENSMUSG00000097099.3	Gm9917	chr9	lncRNA	predicted gene 9917
chr9	107441973	107443723	-	107441112	107443723	A3SS	0.5	50	50	ENSMUST00000181099.2	ENSMUSG00000097099.3	Gm9917	chr9	lncRNA	predicted gene 9917
chr9	107441112	107445525	-	107441112	107443723	5pMXE	0.5	50	50	ENSMUST00000194628.2	ENSMUSG00000097099.3	Gm9917	chr9	lncRNA	predicted gene 9917
chr9	107440731	107441028	+	107440731	107441775	A3SS	0.5	50	50	ENSMUST00000010198.5	ENSMUSG00000010054.5	Tusc2	chr9	protein_coding	tumor suppressor 2, mitochondrial calcium regulator
chr9	107441871	107442046	+	107441895	107442046	A5SS	0.5	50	50	ENSMUST00000010198.5	ENSMUSG00000010054.5	Tusc2	chr9	protein_coding	tumor suppressor 2, mitochondrial calcium regulator
chr9	107445175;107446432	107446182;107447303	+	107445175	107447303	cassetteExon	0.5	100	100	ENSMUST00000192887.6	ENSMUSG00000010047.13	Hyal2	chr9	protein_coding	hyaluronoglucosaminidase 2
chr9	107445175;107446628	107446182;107447303	+	107445175	107447303	cassetteExon	0.5	100	100	ENSMUST00000192887.6	ENSMUSG00000010047.13	Hyal2	chr9	protein_coding	hyaluronoglucosaminidase 2
chr9	107446628	107447303	+	107446432	107447303	A5SS	0.33	50	50	ENSMUST00000195752.6	ENSMUSG00000010047.13	Hyal2	chr9	protein_coding	hyaluronoglucosaminidase 2
chr9	107445175	107447303	+	107446432	107447303	5pMXE	0.33	50	50	ENSMUST00000010191.13	ENSMUSG00000010047.13	Hyal2	chr9	protein_coding	hyaluronoglucosaminidase 2
chr9	107445175	107447303	+	107446628	107447303	5pMXE	0.33	50	50	ENSMUST00000194794.2	ENSMUSG00000010047.13	Hyal2	chr9	protein_coding	hyaluronoglucosaminidase 2
chr9	107455675	107456299	+	107455675;107456169	107456080;107456299	ES	0.5	50	50	ENSMUST00000112387.9	ENSMUSG00000010051.16	Hyal1	chr9	protein_coding	hyaluronoglucosaminidase 1
chr9	107456584	107460016	+	107456584	107457656	3pMXE	0.5	50	50	ENSMUST00000112387.9	ENSMUSG00000010051.16	Hyal1	chr9	protein_coding	hyaluronoglucosaminidase 1
chr9	107454277	107455527	+	107454277	107454752	A3SS	0.5	50	50	ENSMUST00000112387.9	ENSMUSG00000010051.16	Hyal1	chr9	protein_coding	hyaluronoglucosaminidase 1
chr9	107456169	107460016	+	107456169	107456299	3pMXE	0.5	50	50	ENSMUST00000123005.8	ENSMUSG00000010051.16	Hyal1	chr9	protein_coding	hyaluronoglucosaminidase 1
chr9	107455675	107456299	+	107456169	107456299	5pMXE	0.5	50	50	ENSMUST00000149638.8	ENSMUSG00000079334.9	Naa80	chr9	protein_coding	N(alpha)-acetyltransferase 80, NatH catalytic subunit
chr9	107458134	107461951	+	107458134	107460335	3pMXE	0.33	50	50	ENSMUST00000149638.8	ENSMUSG00000079334.9	Naa80	chr9	protein_coding	N(alpha)-acetyltransferase 80, NatH catalytic subunit
chr9	107458134	107460016	+	107458134	107460335	A3SS	0.33	50	50	ENSMUST00000149638.8	ENSMUSG00000079334.9	Naa80	chr9	protein_coding	N(alpha)-acetyltransferase 80, NatH catalytic subunit
chr9	107456169	107460016	+	107456169;107456584	107456299;107460016	ES	0.33	50	50	ENSMUST00000130053.8	ENSMUSG00000079334.9	Naa80	chr9	protein_coding	N(alpha)-acetyltransferase 80, NatH catalytic subunit
chr9	107456584;107458134	107457656;107460016	+	107456584	107460016	cassetteExon	0.5	100	100	ENSMUST00000130053.8	ENSMUSG00000079334.9	Naa80	chr9	protein_coding	N(alpha)-acetyltransferase 80, NatH catalytic subunit
chr9	107456169	107460016	+	107456169;107458134	107456299;107460016	ES	0.33	50	50	ENSMUST00000122985.8	ENSMUSG00000079334.9	Naa80	chr9	protein_coding	N(alpha)-acetyltransferase 80, NatH catalytic subunit
chr9	107458134	107461951	+	107458134	107460016	3pMXE	0.33	50	50	ENSMUST00000122985.8	ENSMUSG00000079334.9	Naa80	chr9	protein_coding	N(alpha)-acetyltransferase 80, NatH catalytic subunit
chr9	107456584	107460016	+	107458134	107460016	A5SS	0.33	50	50	ENSMUST00000122985.8	ENSMUSG00000079334.9	Naa80	chr9	protein_coding	N(alpha)-acetyltransferase 80, NatH catalytic subunit
chr9	107458134	107460016	+	107456169	107460016	A5SS	0.33	50	50	ENSMUST00000127380.8	ENSMUSG00000079334.9	Naa80	chr9	protein_coding	N(alpha)-acetyltransferase 80, NatH catalytic subunit
chr9	107462864	107463774	+	107462864;107463670	107463581;107463774	ES	0.5	50	50	ENSMUST00000148440.8	ENSMUSG00000036091.9	Hyal3	chr9	protein_coding	hyaluronoglucosaminidase 3
chr9	107458535	107461951	+	107458134	107461951	A5SS	0.5	50	50	ENSMUST00000148440.8	ENSMUSG00000036091.9	Hyal3	chr9	protein_coding	hyaluronoglucosaminidase 3
chr9	107468309	107468767	+	107468309;107468506	107468401;107468767	ES	0.5	50	50	ENSMUST00000010192.11	ENSMUSG00000010048.11	Ifrd2	chr9	protein_coding	interferon-related developmental regulator 2
chr9	107467621	107468251	+	107467621	107467704	A3SS&ES	0.5	50	50	ENSMUST00000010192.11	ENSMUSG00000010048.11	Ifrd2	chr9	protein_coding	interferon-related developmental regulator 2
chr9	107469402	107469456	+	107469402	107469475	A3SS	0.5	50	50	ENSMUST00000010192.11	ENSMUSG00000010048.11	Ifrd2	chr9	protein_coding	interferon-related developmental regulator 2
chr9	107468309	107468767	+	107468309	107468401	3pMXE	0.5	50	50	ENSMUST00000193153.2	ENSMUSG00000010048.11	Ifrd2	chr9	protein_coding	interferon-related developmental regulator 2
chr9	107482354	107483749	-	107482354	107482646	5pMXE	0.2	50	50	ENSMUST00000123926.8	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107482354	107483755	-	107482354	107482646	5pMXE	0.2	50	50	ENSMUST00000123926.8	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107482354	107483953	-	107482354	107482646	5pMXE	0.2	50	50	ENSMUST00000123926.8	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107477306	107477529	-	107477239	107477529	A3SS	0.5	50	50	ENSMUST00000123926.8	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107482354	107482471	-	107482354	107482646	A5SS	0.2	50	50	ENSMUST00000123926.8	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107482786	107486320	-	107482786;107484291	107484233;107486320	ES	0.33	50	50	ENSMUST00000102532.10	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107482354;107484133	107483749;107484233	-	107482354;107482786	107482646;107484233	MXE	0.5	100	100	ENSMUST00000102532.10	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107482354;107484133	107483755;107484233	-	107482354;107482786	107482646;107484233	MXE	0.5	100	100	ENSMUST00000102532.10	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107482354;107484133	107483953;107484233	-	107482354;107482786	107482646;107484233	MXE	0.5	100	100	ENSMUST00000102532.10	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107482786;107484133	107483749;107484233	-	107482786	107484233	cassetteExon	0.5	100	100	ENSMUST00000102532.10	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107482786;107484133	107483755;107484233	-	107482786	107484233	cassetteExon	0.5	100	100	ENSMUST00000102532.10	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107484295	107486320	-	107484291	107486320	A3SS	0.33	50	50	ENSMUST00000102532.10	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107482354	107483749	-	107482354;107482786	107482646;107483749	ES	0.5	50	50	ENSMUST00000102530.8	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107482786	107483755	-	107482786	107483749	A5SS	0.25	50	50	ENSMUST00000102530.8	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107482354	107483755	-	107482354;107482786	107482646;107483755	ES	0.5	50	50	ENSMUST00000073448.12	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107482786	107484233	-	107482786	107483755	5pMXE	0.25	50	50	ENSMUST00000073448.12	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107482786	107486320	-	107482786	107483755	5pMXE	0.25	50	50	ENSMUST00000073448.12	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107482354	107483749	-	107482354	107482471	5pMXE	0.2	50	50	ENSMUST00000102529.10	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107482354	107483755	-	107482354	107482471	5pMXE	0.2	50	50	ENSMUST00000102529.10	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107482354	107483953	-	107482354	107482471	5pMXE	0.2	50	50	ENSMUST00000102529.10	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107482354;107484291	107483953;107486320	-	107482354;107482786	107482646;107486320	MXE	0.5	100	100	ENSMUST00000102531.7	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107482354;107484295	107483953;107486320	-	107482354;107482786	107482646;107486320	MXE	0.5	100	100	ENSMUST00000102531.7	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107482786;107484295	107484233;107486320	-	107482786	107486320	cassetteExon	0.5	100	100	ENSMUST00000102531.7	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107482786	107483749	-	107482786	107486320	A5SS	0.25	50	50	ENSMUST00000102531.7	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107482354	107483953	-	107482354	107483749	5pMXE	0.2	50	50	ENSMUST00000195662.6	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107482354;107482786	107482471;107483749	-	107482354	107483749	cassetteExon	0.5	100	100	ENSMUST00000195662.6	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107482354	107483755	-	107482354	107483749	A5SS	0.2	50	50	ENSMUST00000195662.6	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107482354	107483953	-	107482354	107483755	5pMXE	0.2	50	50	ENSMUST00000194606.2	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107482354;107482786	107482471;107483755	-	107482354	107483755	cassetteExon	0.5	100	100	ENSMUST00000194606.2	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107482354;107482786	107482471;107484233	-	107482354;107484133	107483953;107484233	MXE	0.5	100	100	ENSMUST00000195057.2	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107482354;107482786	107482471;107486320	-	107482354;107484295	107483953;107486320	MXE	0.5	100	100	ENSMUST00000195057.2	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107482786	107486320	-	107482786	107484233	5pMXE	0.25	50	50	ENSMUST00000193551.2	ENSMUSG00000057969.16	Sema3b	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr9	107497661;107511682	107511598;107512299	-	107497661	107512299	cassetteExon	0.5	100	100	ENSMUST00000192615.6	ENSMUSG00000032562.14	Gnai2	chr9	protein_coding	guanine nucleotide binding protein (G protein), alpha inhibiting 2
chr9	107492297	107492811	-	107491914	107492811	A3SS	0.5	50	50	ENSMUST00000192615.6	ENSMUSG00000032562.14	Gnai2	chr9	protein_coding	guanine nucleotide binding protein (G protein), alpha inhibiting 2
chr9	107497661	107503703	-	107497661	107512299	A5SS	0.33	50	50	ENSMUST00000192615.6	ENSMUSG00000032562.14	Gnai2	chr9	protein_coding	guanine nucleotide binding protein (G protein), alpha inhibiting 2
chr9	107497661	107511598	-	107497661	107503703	5pMXE	0.33	50	50	ENSMUST00000193394.2	ENSMUSG00000032562.14	Gnai2	chr9	protein_coding	guanine nucleotide binding protein (G protein), alpha inhibiting 2
chr9	107532666	107532784	-	107532579	107532784	A3SS	0.5	50	50	ENSMUST00000167868.8	ENSMUSG00000010064.16	Slc38a3	chr9	protein_coding	solute carrier family 38, member 3
chr9	107534257	107534829	-	107533876	107534829	A3SS	0.5	50	50	ENSMUST00000167868.8	ENSMUSG00000010064.16	Slc38a3	chr9	protein_coding	solute carrier family 38, member 3
chr9	107532884	107533163	-	107532884	107533134	A5SS	0.5	50	50	ENSMUST00000167868.8	ENSMUSG00000010064.16	Slc38a3	chr9	protein_coding	solute carrier family 38, member 3
chr9	107536443	107545914	-	107536443	107544335	5pMXE	0.14	50	50	ENSMUST00000010208.14	ENSMUSG00000010064.16	Slc38a3	chr9	protein_coding	solute carrier family 38, member 3
chr9	107536443	107546052	-	107536443	107544335	5pMXE	0.14	50	50	ENSMUST00000010208.14	ENSMUSG00000010064.16	Slc38a3	chr9	protein_coding	solute carrier family 38, member 3
chr9	107536443	107546628	-	107536443	107544335	5pMXE	0.14	50	50	ENSMUST00000010208.14	ENSMUSG00000010064.16	Slc38a3	chr9	protein_coding	solute carrier family 38, member 3
chr9	107536443	107536567	-	107536443	107544335	A5SS	0.14	50	50	ENSMUST00000010208.14	ENSMUSG00000010064.16	Slc38a3	chr9	protein_coding	solute carrier family 38, member 3
chr9	107536443	107542369	-	107536443	107544335	A5SS	0.14	50	50	ENSMUST00000010208.14	ENSMUSG00000010064.16	Slc38a3	chr9	protein_coding	solute carrier family 38, member 3
chr9	107536443	107544503	-	107536443	107544335	A5SS	0.14	50	50	ENSMUST00000010208.14	ENSMUSG00000010064.16	Slc38a3	chr9	protein_coding	solute carrier family 38, member 3
chr9	107536443	107546628	-	107536443	107546052	5pMXE	0.14	50	50	ENSMUST00000194895.6	ENSMUSG00000010064.16	Slc38a3	chr9	protein_coding	solute carrier family 38, member 3
chr9	107536443;107545945	107545914;107546052	-	107536443	107546052	cassetteExon	0.5	100	100	ENSMUST00000194895.6	ENSMUSG00000010064.16	Slc38a3	chr9	protein_coding	solute carrier family 38, member 3
chr9	107536443	107536567	-	107536443	107546052	A5SS	0.14	50	50	ENSMUST00000194895.6	ENSMUSG00000010064.16	Slc38a3	chr9	protein_coding	solute carrier family 38, member 3
chr9	107536443	107542369	-	107536443	107546052	A5SS	0.14	50	50	ENSMUST00000194895.6	ENSMUSG00000010064.16	Slc38a3	chr9	protein_coding	solute carrier family 38, member 3
chr9	107536443	107544503	-	107536443	107546052	A5SS	0.14	50	50	ENSMUST00000194895.6	ENSMUSG00000010064.16	Slc38a3	chr9	protein_coding	solute carrier family 38, member 3
chr9	107536443	107545914	-	107536443	107544503	5pMXE	0.14	50	50	ENSMUST00000193932.6	ENSMUSG00000010064.16	Slc38a3	chr9	protein_coding	solute carrier family 38, member 3
chr9	107536443	107546628	-	107536443	107544503	5pMXE	0.14	50	50	ENSMUST00000193932.6	ENSMUSG00000010064.16	Slc38a3	chr9	protein_coding	solute carrier family 38, member 3
chr9	107536443	107536567	-	107536443	107544503	A5SS	0.14	50	50	ENSMUST00000193932.6	ENSMUSG00000010064.16	Slc38a3	chr9	protein_coding	solute carrier family 38, member 3
chr9	107536443	107542369	-	107536443	107544503	A5SS	0.14	50	50	ENSMUST00000193932.6	ENSMUSG00000010064.16	Slc38a3	chr9	protein_coding	solute carrier family 38, member 3
chr9	107536443	107536567	-	107536443	107546628	A5SS	0.14	50	50	ENSMUST00000192323.6	ENSMUSG00000010064.16	Slc38a3	chr9	protein_coding	solute carrier family 38, member 3
chr9	107536443	107542369	-	107536443	107546628	A5SS	0.14	50	50	ENSMUST00000192323.6	ENSMUSG00000010064.16	Slc38a3	chr9	protein_coding	solute carrier family 38, member 3
chr9	107536443	107545914	-	107536443	107546628	A5SS	0.14	50	50	ENSMUST00000192323.6	ENSMUSG00000010064.16	Slc38a3	chr9	protein_coding	solute carrier family 38, member 3
chr9	107536443;107542676	107542369;107545914	-	107536443	107545914	cassetteExon	0.5	100	100	ENSMUST00000192990.6	ENSMUSG00000010064.16	Slc38a3	chr9	protein_coding	solute carrier family 38, member 3
chr9	107536443	107536567	-	107536443	107545914	A5SS	0.16	50	50	ENSMUST00000192990.6	ENSMUSG00000010064.16	Slc38a3	chr9	protein_coding	solute carrier family 38, member 3
chr9	107536443	107545914	-	107536443	107542369	5pMXE	0.14	50	50	ENSMUST00000195843.2	ENSMUSG00000010064.16	Slc38a3	chr9	protein_coding	solute carrier family 38, member 3
chr9	107536443;107536663	107536567;107542369	-	107536443	107542369	cassetteExon	0.5	100	100	ENSMUST00000195843.2	ENSMUSG00000010064.16	Slc38a3	chr9	protein_coding	solute carrier family 38, member 3
chr9	107554872;107555442	107555195;107556642	-	107554872	107556642	cassetteExon	0.5	100	100	ENSMUST00000010205.9	ENSMUSG00000034837.13	Gnat1	chr9	protein_coding	guanine nucleotide binding protein, alpha transducing 1
chr9	107554872	107555578	-	107554872	107556642	A5SS	0.33	50	50	ENSMUST00000010205.9	ENSMUSG00000034837.13	Gnat1	chr9	protein_coding	guanine nucleotide binding protein, alpha transducing 1
chr9	107554872	107555195	-	107554872	107555578	A5SS	0.33	50	50	ENSMUST00000195129.6	ENSMUSG00000034837.13	Gnat1	chr9	protein_coding	guanine nucleotide binding protein, alpha transducing 1
chr9	107554872	107556642	-	107554872	107555195	5pMXE	0.33	50	50	ENSMUST00000194153.2	ENSMUSG00000034837.13	Gnat1	chr9	protein_coding	guanine nucleotide binding protein, alpha transducing 1
chr9	107566978;107568647	107568329;107569367	-	107566978	107569367	cassetteExon	0.5	100	100	ENSMUST00000080560.9	ENSMUSG00000034684.13	Sema3f	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
chr9	107566978;107568647	107568555;107569367	-	107566978	107569367	cassetteExon	0.5	100	100	ENSMUST00000080560.9	ENSMUSG00000034684.13	Sema3f	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
chr9	107561783	107561887	-	107561790	107561887	A3SS	0.5	50	50	ENSMUST00000080560.9	ENSMUSG00000034684.13	Sema3f	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
chr9	107569504	107569588	-	107569486	107569588	A3SS	0.5	50	50	ENSMUST00000080560.9	ENSMUSG00000034684.13	Sema3f	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
chr9	107565548	107566849	-	107565548	107566885	A5SS	0.5	50	50	ENSMUST00000080560.9	ENSMUSG00000034684.13	Sema3f	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
chr9	107582790	107586617	-	107582790	107587523	A5SS	0.5	50	50	ENSMUST00000080560.9	ENSMUSG00000034684.13	Sema3f	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
chr9	107566978;107568414	107568329;107568555	-	107566978	107568555	cassetteExon	0.5	100	100	ENSMUST00000192727.6	ENSMUSG00000034684.13	Sema3f	chr9	protein_coding	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
chr9	107626998	107627662	-	107626998;107627291	107627207;107627662	ES	0.5	50	50	ENSMUST00000182659.8	ENSMUSG00000032580.13	Rbm5	chr9	protein_coding	RNA binding motif protein 5
chr9	107631687	107634108	-	107631687;107633112	107633052;107634108	ES	0.5	50	50	ENSMUST00000182659.8	ENSMUSG00000032580.13	Rbm5	chr9	protein_coding	RNA binding motif protein 5
chr9	107634191	107637521	-	107634191;107637048	107636975;107637521	ES	0.5	50	50	ENSMUST00000182659.8	ENSMUSG00000032580.13	Rbm5	chr9	protein_coding	RNA binding motif protein 5
chr9	107626995	107627207	-	107626998	107627207	A3SS	0.5	50	50	ENSMUST00000182659.8	ENSMUSG00000032580.13	Rbm5	chr9	protein_coding	RNA binding motif protein 5
chr9	107642845	107644742	-	107642849	107644742	A3SS	0.5	50	50	ENSMUST00000182659.8	ENSMUSG00000032580.13	Rbm5	chr9	protein_coding	RNA binding motif protein 5
chr9	107646825	107647648	-	107646825	107648084	A5SS	0.25	50	50	ENSMUST00000182659.8	ENSMUSG00000032580.13	Rbm5	chr9	protein_coding	RNA binding motif protein 5
chr9	107646825	107647751	-	107646825	107648084	A5SS	0.25	50	50	ENSMUST00000182659.8	ENSMUSG00000032580.13	Rbm5	chr9	protein_coding	RNA binding motif protein 5
chr9	107646825	107647760	-	107646825	107648084	A5SS	0.25	50	50	ENSMUST00000182659.8	ENSMUSG00000032580.13	Rbm5	chr9	protein_coding	RNA binding motif protein 5
chr9	107626998	107627662	-	107627291	107627662	A3SS&ES	0.5	50	50	ENSMUST00000035199.13	ENSMUSG00000032580.13	Rbm5	chr9	protein_coding	RNA binding motif protein 5
chr9	107646825	107647751	-	107646825	107647648	5pMXE	0.25	50	50	ENSMUST00000182304.8	ENSMUSG00000032580.13	Rbm5	chr9	protein_coding	RNA binding motif protein 5
chr9	107646825	107647760	-	107646825	107647648	5pMXE	0.25	50	50	ENSMUST00000182304.8	ENSMUSG00000032580.13	Rbm5	chr9	protein_coding	RNA binding motif protein 5
chr9	107634191	107637521	-	107637048	107637521	3pMXE	0.5	50	50	ENSMUST00000182007.8	ENSMUSG00000032580.13	Rbm5	chr9	protein_coding	RNA binding motif protein 5
chr9	107646825	107647760	-	107646825	107647751	A5SS	0.25	50	50	ENSMUST00000182022.8	ENSMUSG00000032580.13	Rbm5	chr9	protein_coding	RNA binding motif protein 5
chr9	107728203	107737548	-	107728203;107730873	107729324;107737548	ES	0.2	50	50	ENSMUST00000035201.13	ENSMUSG00000032582.15	Rbm6	chr9	protein_coding	RNA binding motif protein 6
chr9	107737658;107738928	107738822;107749848	-	107737658	107749848	cassetteExon	0.5	100	100	ENSMUST00000035201.13	ENSMUSG00000032582.15	Rbm6	chr9	protein_coding	RNA binding motif protein 6
chr9	107737658;107742192	107742117;107749848	-	107737658	107749848	cassetteExon	0.5	100	100	ENSMUST00000035201.13	ENSMUSG00000032582.15	Rbm6	chr9	protein_coding	RNA binding motif protein 6
chr9	107665097	107665307	-	107665063	107665307	A3SS	0.5	50	50	ENSMUST00000035201.13	ENSMUSG00000032582.15	Rbm6	chr9	protein_coding	RNA binding motif protein 6
chr9	107689566	107710633	-	107677972	107710633	A3SS	0.5	50	50	ENSMUST00000035201.13	ENSMUSG00000032582.15	Rbm6	chr9	protein_coding	RNA binding motif protein 6
chr9	107730602	107737548	-	107730873	107737548	A3SS	0.2	50	50	ENSMUST00000035201.13	ENSMUSG00000032582.15	Rbm6	chr9	protein_coding	RNA binding motif protein 6
chr9	107737658	107749402	-	107737658	107749848	A5SS	0.25	50	50	ENSMUST00000035201.13	ENSMUSG00000032582.15	Rbm6	chr9	protein_coding	RNA binding motif protein 6
chr9	107728203	107737548	-	107728203;107730602	107729324;107737548	ES	0.2	50	50	ENSMUST00000183032.8	ENSMUSG00000032582.15	Rbm6	chr9	protein_coding	RNA binding motif protein 6
chr9	107724536	107737548	-	107673736	107737548	A3SS	0.2	50	50	ENSMUST00000181986.8	ENSMUSG00000032582.15	Rbm6	chr9	protein_coding	RNA binding motif protein 6
chr9	107728203	107737548	-	107673736	107737548	A3SS	0.2	50	50	ENSMUST00000181986.8	ENSMUSG00000032582.15	Rbm6	chr9	protein_coding	RNA binding motif protein 6
chr9	107730602	107737548	-	107673736	107737548	A3SS	0.2	50	50	ENSMUST00000181986.8	ENSMUSG00000032582.15	Rbm6	chr9	protein_coding	RNA binding motif protein 6
chr9	107730873	107737548	-	107673736	107737548	A3SS	0.2	50	50	ENSMUST00000181986.8	ENSMUSG00000032582.15	Rbm6	chr9	protein_coding	RNA binding motif protein 6
chr9	107673736	107677898	-	107673736	107737548	A5SS	0.5	50	50	ENSMUST00000181986.8	ENSMUSG00000032582.15	Rbm6	chr9	protein_coding	RNA binding motif protein 6
chr9	107724536	107737548	-	107724536;107728203	107728114;107737548	ES	0.2	50	50	ENSMUST00000195883.6	ENSMUSG00000032582.15	Rbm6	chr9	protein_coding	RNA binding motif protein 6
chr9	107730602	107737548	-	107728203	107737548	A3SS	0.2	50	50	ENSMUST00000195883.6	ENSMUSG00000032582.15	Rbm6	chr9	protein_coding	RNA binding motif protein 6
chr9	107730873	107737548	-	107728203	107737548	A3SS	0.2	50	50	ENSMUST00000195883.6	ENSMUSG00000032582.15	Rbm6	chr9	protein_coding	RNA binding motif protein 6
chr9	107728203	107729324	-	107728203	107737548	A5SS	0.5	50	50	ENSMUST00000195883.6	ENSMUSG00000032582.15	Rbm6	chr9	protein_coding	RNA binding motif protein 6
chr9	107730602	107737548	-	107724536	107737548	A3SS	0.25	50	50	ENSMUST00000193957.6	ENSMUSG00000032582.15	Rbm6	chr9	protein_coding	RNA binding motif protein 6
chr9	107730873	107737548	-	107724536	107737548	A3SS	0.25	50	50	ENSMUST00000193957.6	ENSMUSG00000032582.15	Rbm6	chr9	protein_coding	RNA binding motif protein 6
chr9	107724536	107737548	-	107724536	107728114	5pMXE	0.5	50	50	ENSMUST00000183179.2	ENSMUSG00000032582.15	Rbm6	chr9	protein_coding	RNA binding motif protein 6
chr9	107737658;107738928	107738822;107749848	-	107737658;107742192	107742117;107749848	MXE	0.5	100	100	ENSMUST00000195866.6	ENSMUSG00000032582.15	Rbm6	chr9	protein_coding	RNA binding motif protein 6
chr9	107737658	107749402	-	107737658	107742117	A5SS&ES	0.25	50	50	ENSMUST00000195866.6	ENSMUSG00000032582.15	Rbm6	chr9	protein_coding	RNA binding motif protein 6
chr9	107737658	107738822	-	107737658	107749402	A5SS	0.25	50	50	ENSMUST00000183035.2	ENSMUSG00000032582.15	Rbm6	chr9	protein_coding	RNA binding motif protein 6
chr9	107791768	107791908	+	107791768	107791911	A3SS	0.5	50	50	ENSMUST00000035203.9	ENSMUSG00000032584.13	Mst1r	chr9	protein_coding	macrophage stimulating 1 receptor (c-met-related tyrosine kinase)
chr9	107785607	107788719	+	107785579	107788719	A5SS	0.5	50	50	ENSMUST00000035203.9	ENSMUSG00000032584.13	Mst1r	chr9	protein_coding	macrophage stimulating 1 receptor (c-met-related tyrosine kinase)
chr9	107822581	107822719	+	107822581	107822688	A3SS	0.5	50	50	ENSMUST00000035700.14	ENSMUSG00000032936.14	Camkv	chr9	protein_coding	CaM kinase-like vesicle-associated
chr9	107823659	107823990	+	107823659	107823817	A3SS&ES	0.5	50	50	ENSMUST00000035700.14	ENSMUSG00000032936.14	Camkv	chr9	protein_coding	CaM kinase-like vesicle-associated
chr9	107814750	107822478	+	107813250	107822478	A5SS	0.5	50	50	ENSMUST00000035700.14	ENSMUSG00000032936.14	Camkv	chr9	protein_coding	CaM kinase-like vesicle-associated
chr9	107845948	107847203	+	107845948;107846973	107846907;107847203	ES	0.5	50	50	ENSMUST00000194538.6	ENSMUSG00000032586.10	Traip	chr9	protein_coding	TRAF-interacting protein
chr9	107833121	107833593	+	107833121	107833545	A3SS	0.5	50	50	ENSMUST00000194538.6	ENSMUSG00000032586.10	Traip	chr9	protein_coding	TRAF-interacting protein
chr9	107833628	107834086	+	107833628	107836015	A3SS	0.5	50	50	ENSMUST00000194538.6	ENSMUSG00000032586.10	Traip	chr9	protein_coding	TRAF-interacting protein
chr9	107837757	107838177	+	107836765	107838177	A5SS	0.5	50	50	ENSMUST00000194538.6	ENSMUSG00000032586.10	Traip	chr9	protein_coding	TRAF-interacting protein
chr9	107853164	107853254	+	107853164	107853234	A3SS	0.33	50	50	ENSMUST00000176037.8	ENSMUSG00000032596.15	Uba7	chr9	protein_coding	ubiquitin-like modifier activating enzyme 7
chr9	107853164	107853267	+	107853164	107853234	A3SS	0.33	50	50	ENSMUST00000176037.8	ENSMUSG00000032596.15	Uba7	chr9	protein_coding	ubiquitin-like modifier activating enzyme 7
chr9	107860562	107869506	+	107860562	107861016	3pMXE	0.33	50	50	ENSMUST00000035216.11	ENSMUSG00000032596.15	Uba7	chr9	protein_coding	ubiquitin-like modifier activating enzyme 7
chr9	107853164	107853267	+	107853164	107853254	A3SS	0.33	50	50	ENSMUST00000035216.11	ENSMUSG00000032596.15	Uba7	chr9	protein_coding	ubiquitin-like modifier activating enzyme 7
chr9	107853611	107853854	+	107853611	107853909	A3SS	0.33	50	50	ENSMUST00000035216.11	ENSMUSG00000032596.15	Uba7	chr9	protein_coding	ubiquitin-like modifier activating enzyme 7
chr9	107855515	107855666	+	107855515	107855664	A3SS	0.5	50	50	ENSMUST00000035216.11	ENSMUSG00000032596.15	Uba7	chr9	protein_coding	ubiquitin-like modifier activating enzyme 7
chr9	107858495	107858717	+	107858495	107858589	A3SS	0.5	50	50	ENSMUST00000035216.11	ENSMUSG00000032596.15	Uba7	chr9	protein_coding	ubiquitin-like modifier activating enzyme 7
chr9	107860562	107860955	+	107860562	107861016	A3SS	0.33	50	50	ENSMUST00000035216.11	ENSMUSG00000032596.15	Uba7	chr9	protein_coding	ubiquitin-like modifier activating enzyme 7
chr9	107853611	107853854	+	107853611	107855408	A3SS	0.33	50	50	ENSMUST00000176478.8	ENSMUSG00000032596.15	Uba7	chr9	protein_coding	ubiquitin-like modifier activating enzyme 7
chr9	107853611	107853909	+	107853611	107855408	A3SS	0.33	50	50	ENSMUST00000176478.8	ENSMUSG00000032596.15	Uba7	chr9	protein_coding	ubiquitin-like modifier activating enzyme 7
chr9	107855221	107855408	+	107853611	107855408	A5SS	0.5	50	50	ENSMUST00000176478.8	ENSMUSG00000032596.15	Uba7	chr9	protein_coding	ubiquitin-like modifier activating enzyme 7
chr9	107860562	107869506	+	107860562	107860955	3pMXE	0.33	50	50	ENSMUST00000176340.2	ENSMUSG00000032596.15	Uba7	chr9	protein_coding	ubiquitin-like modifier activating enzyme 7
chr9	107869773	107870046	+	107869605	107870046	A5SS	0.5	50	50	ENSMUST00000176382.8	ENSMUSG00000079323.10	Gm20661	chr9	protein_coding	predicted gene 20661
chr9	107862263	107862701	-	107862263	107862896	A5SS	0.5	50	50	ENSMUST00000048568.6	ENSMUSG00000042106.6	Inka1	chr9	protein_coding	inka box actin regulator 1
chr9	107873530	107874080	+	107873530;107873999	107873796;107874080	ES	0.5	50	50	ENSMUST00000177173.8	ENSMUSG00000032595.11	Cdhr4	chr9	protein_coding	cadherin-related family member 4
chr9	107874219	107874688	+	107874219;107874602	107874452;107874688	ES	0.5	50	50	ENSMUST00000177173.8	ENSMUSG00000032595.11	Cdhr4	chr9	protein_coding	cadherin-related family member 4
chr9	107875261	107875901	+	107875261;107875768	107875712;107875901	ES	0.5	50	50	ENSMUST00000177173.8	ENSMUSG00000032595.11	Cdhr4	chr9	protein_coding	cadherin-related family member 4
chr9	107876226	107901302	+	107876226	107876729	3pMXE	0.5	50	50	ENSMUST00000177173.8	ENSMUSG00000032595.11	Cdhr4	chr9	protein_coding	cadherin-related family member 4
chr9	107872965	107873132	+	107872965	107873067	A3SS	0.5	50	50	ENSMUST00000177173.8	ENSMUSG00000032595.11	Cdhr4	chr9	protein_coding	cadherin-related family member 4
chr9	107873271	107873437	+	107873220	107873437	A5SS	0.5	50	50	ENSMUST00000177173.8	ENSMUSG00000032595.11	Cdhr4	chr9	protein_coding	cadherin-related family member 4
chr9	107874980	107875119	+	107874908	107875119	A5SS	0.33	50	50	ENSMUST00000177173.8	ENSMUSG00000032595.11	Cdhr4	chr9	protein_coding	cadherin-related family member 4
chr9	107875964	107876196	+	107875988	107876196	A5SS	0.25	50	50	ENSMUST00000177173.8	ENSMUSG00000032595.11	Cdhr4	chr9	protein_coding	cadherin-related family member 4
chr9	107874219	107876196	+	107874219	107875119	3pMXE	0.25	50	50	ENSMUST00000176306.8	ENSMUSG00000032595.11	Cdhr4	chr9	protein_coding	cadherin-related family member 4
chr9	107874219;107874908	107874452;107875119	+	107874219	107875119	cassetteExon	0.5	100	100	ENSMUST00000176306.8	ENSMUSG00000032595.11	Cdhr4	chr9	protein_coding	cadherin-related family member 4
chr9	107874219;107874908	107874688;107875119	+	107874219	107875119	cassetteExon	0.5	100	100	ENSMUST00000176306.8	ENSMUSG00000032595.11	Cdhr4	chr9	protein_coding	cadherin-related family member 4
chr9	107874219;107874980	107874688;107875119	+	107874219	107875119	cassetteExon	0.5	100	100	ENSMUST00000176306.8	ENSMUSG00000032595.11	Cdhr4	chr9	protein_coding	cadherin-related family member 4
chr9	107874219;107875261	107875119;107876196	+	107874219	107876196	cassetteExon	0.5	100	100	ENSMUST00000177226.8	ENSMUSG00000032595.11	Cdhr4	chr9	protein_coding	cadherin-related family member 4
chr9	107874219	107874452	+	107874219	107876196	A3SS	0.25	50	50	ENSMUST00000177226.8	ENSMUSG00000032595.11	Cdhr4	chr9	protein_coding	cadherin-related family member 4
chr9	107874219	107874688	+	107874219	107876196	A3SS	0.25	50	50	ENSMUST00000177226.8	ENSMUSG00000032595.11	Cdhr4	chr9	protein_coding	cadherin-related family member 4
chr9	107875964	107876196	+	107874219	107876196	A5SS	0.25	50	50	ENSMUST00000177226.8	ENSMUSG00000032595.11	Cdhr4	chr9	protein_coding	cadherin-related family member 4
chr9	107875988	107876196	+	107874219	107876196	A5SS	0.25	50	50	ENSMUST00000177226.8	ENSMUSG00000032595.11	Cdhr4	chr9	protein_coding	cadherin-related family member 4
chr9	107875261;107875964	107875712;107876196	+	107875261	107876196	cassetteExon	0.5	100	100	ENSMUST00000035215.9	ENSMUSG00000032595.11	Cdhr4	chr9	protein_coding	cadherin-related family member 4
chr9	107875261;107875988	107875712;107876196	+	107875261	107876196	cassetteExon	0.5	100	100	ENSMUST00000035215.9	ENSMUSG00000032595.11	Cdhr4	chr9	protein_coding	cadherin-related family member 4
chr9	107875261;107875964	107875901;107876196	+	107875261	107876196	cassetteExon	0.5	100	100	ENSMUST00000035215.9	ENSMUSG00000032595.11	Cdhr4	chr9	protein_coding	cadherin-related family member 4
chr9	107875261;107875988	107875901;107876196	+	107875261	107876196	cassetteExon	0.5	100	100	ENSMUST00000035215.9	ENSMUSG00000032595.11	Cdhr4	chr9	protein_coding	cadherin-related family member 4
chr9	107874219	107875119	+	107874219	107874688	3pMXE	0.25	50	50	ENSMUST00000176183.8	ENSMUSG00000032595.11	Cdhr4	chr9	protein_coding	cadherin-related family member 4
chr9	107873530	107874080	+	107873999	107874080	5pMXE	0.5	50	50	ENSMUST00000175802.8	ENSMUSG00000032595.11	Cdhr4	chr9	protein_coding	cadherin-related family member 4
chr9	107874219	107874688	+	107874602	107874688	5pMXE	0.5	50	50	ENSMUST00000176334.8	ENSMUSG00000032595.11	Cdhr4	chr9	protein_coding	cadherin-related family member 4
chr9	107874219	107875119	+	107874908	107875119	5pMXE	0.33	50	50	ENSMUST00000177508.8	ENSMUSG00000032595.11	Cdhr4	chr9	protein_coding	cadherin-related family member 4
chr9	107874219	107875119	+	107874980	107875119	5pMXE	0.33	50	50	ENSMUST00000176373.3	ENSMUSG00000032595.11	Cdhr4	chr9	protein_coding	cadherin-related family member 4
chr9	107901649	107918104	+	107901649;107909408	107909198;107918104	ES	0.5	50	50	ENSMUST00000176454.2	ENSMUSG00000093456.8	Gm20662	chr9	protein_coding	predicted gene 20662
chr9	107922099	107922662	+	107922099	107922445	3pMXE	0.33	50	50	ENSMUST00000176454.2	ENSMUSG00000093456.8	Gm20662	chr9	protein_coding	predicted gene 20662
chr9	107922099	107922206	+	107922099	107922445	A3SS	0.33	50	50	ENSMUST00000176454.2	ENSMUSG00000093456.8	Gm20662	chr9	protein_coding	predicted gene 20662
chr9	107879894	107901302	+	107876226	107901302	A5SS	0.33	50	50	ENSMUST00000176454.2	ENSMUSG00000093456.8	Gm20662	chr9	protein_coding	predicted gene 20662
chr9	107879894	107909198	+	107901649	107909198	A5SS&ES	0.33	50	50	ENSMUST00000176454.2	ENSMUSG00000093456.8	Gm20662	chr9	protein_coding	predicted gene 20662
chr9	107880021	107901302	+	107876226	107901302	A5SS	0.33	50	50	ENSMUST00000176454.2	ENSMUSG00000093456.8	Gm20662	chr9	protein_coding	predicted gene 20662
chr9	107901522	107909198	+	107901649	107909198	A5SS	0.33	50	50	ENSMUST00000176454.2	ENSMUSG00000093456.8	Gm20662	chr9	protein_coding	predicted gene 20662
chr9	107874219	107876196	+	107875261	107876196	5pMXE	0.25	50	50	ENSMUST00000176356.8	ENSMUSG00000093456.8	Gm20662	chr9	protein_coding	predicted gene 20662
chr9	107901649	107918104	+	107901649	107909198	3pMXE	0.5	50	50	ENSMUST00000176356.8	ENSMUSG00000093456.8	Gm20662	chr9	protein_coding	predicted gene 20662
chr9	107879894	107909198	+	107901522	107909198	A5SS&ES	0.33	50	50	ENSMUST00000176459.2	ENSMUSG00000093456.8	Gm20662	chr9	protein_coding	predicted gene 20662
chr9	107922099;107922221	107922206;107922662	+	107922099	107922662	cassetteExon	0.5	100	100	ENSMUST00000035214.11	ENSMUSG00000032594.12	Ip6k1	chr9	protein_coding	inositol hexaphosphate kinase 1
chr9	107922099;107922512	107922206;107922662	+	107922099	107922662	cassetteExon	0.5	100	100	ENSMUST00000035214.11	ENSMUSG00000032594.12	Ip6k1	chr9	protein_coding	inositol hexaphosphate kinase 1
chr9	107922099;107922512	107922445;107922662	+	107922099	107922662	cassetteExon	0.5	100	100	ENSMUST00000035214.11	ENSMUSG00000032594.12	Ip6k1	chr9	protein_coding	inositol hexaphosphate kinase 1
chr9	107879894	107901302	+	107880021	107901302	A5SS	0.33	50	50	ENSMUST00000035214.11	ENSMUSG00000032594.12	Ip6k1	chr9	protein_coding	inositol hexaphosphate kinase 1
chr9	107879894;107901522	107901302;107909198	+	107879894	107909198	cassetteExon	0.5	100	100	ENSMUST00000177396.8	ENSMUSG00000032594.12	Ip6k1	chr9	protein_coding	inositol hexaphosphate kinase 1
chr9	107879894;107901649	107901302;107909198	+	107879894	107909198	cassetteExon	0.5	100	100	ENSMUST00000177396.8	ENSMUSG00000032594.12	Ip6k1	chr9	protein_coding	inositol hexaphosphate kinase 1
chr9	107879894;107901649	107901302;107918104	+	107879894;107909408	107909198;107918104	MXE	0.5	100	100	ENSMUST00000177396.8	ENSMUSG00000032594.12	Ip6k1	chr9	protein_coding	inositol hexaphosphate kinase 1
chr9	107922099	107922662	+	107922512	107922662	A5SS	0.33	50	50	ENSMUST00000167159.9	ENSMUSG00000032594.12	Ip6k1	chr9	protein_coding	inositol hexaphosphate kinase 1
chr9	107922221	107922662	+	107922512	107922662	A5SS	0.33	50	50	ENSMUST00000167159.9	ENSMUSG00000032594.12	Ip6k1	chr9	protein_coding	inositol hexaphosphate kinase 1
chr9	107901649	107918104	+	107909408	107918104	A5SS&ES	0.5	50	50	ENSMUST00000176566.2	ENSMUSG00000032594.12	Ip6k1	chr9	protein_coding	inositol hexaphosphate kinase 1
chr9	107922099;107922221	107922206;107922662	+	107922099;107922512	107922445;107922662	MXE	0.5	100	100	ENSMUST00000177158.2	ENSMUSG00000032594.12	Ip6k1	chr9	protein_coding	inositol hexaphosphate kinase 1
chr9	107926619	107926711	+	107926560	107926711	A5SS	0.5	50	50	ENSMUST00000150700.2	ENSMUSG00000070284.11	Gmppb	chr9	protein_coding	GDP-mannose pyrophosphorylase B
chr9	107927456;107927971	107927650;107928048	+	107927456	107928048	cassetteExon	0.5	100	100	ENSMUST00000145330.3	ENSMUSG00000070284.11	Gmppb	chr9	protein_coding	GDP-mannose pyrophosphorylase B
chr9	107955096;107960136	107960023;107960465	-	107955096	107960465	cassetteExon	0.5	100	100	ENSMUST00000160249.8	ENSMUSG00000041528.16	Rnf123	chr9	protein_coding	ring finger protein 123
chr9	107933647	107933720	-	107933631	107933720	A3SS	0.5	50	50	ENSMUST00000160249.8	ENSMUSG00000041528.16	Rnf123	chr9	protein_coding	ring finger protein 123
chr9	107939058	107939761	-	107939060	107939761	A3SS	0.5	50	50	ENSMUST00000160249.8	ENSMUSG00000041528.16	Rnf123	chr9	protein_coding	ring finger protein 123
chr9	107935795	107935992	-	107935795	107935982	A5SS	0.5	50	50	ENSMUST00000160249.8	ENSMUSG00000041528.16	Rnf123	chr9	protein_coding	ring finger protein 123
chr9	107940880	107941102	-	107940880	107941120	A5SS	0.5	50	50	ENSMUST00000160249.8	ENSMUSG00000041528.16	Rnf123	chr9	protein_coding	ring finger protein 123
chr9	107948656	107950065	-	107948656	107954548	A5SS	0.5	50	50	ENSMUST00000160249.8	ENSMUSG00000041528.16	Rnf123	chr9	protein_coding	ring finger protein 123
chr9	107955096	107955999	-	107955096	107960465	A5SS	0.16	50	50	ENSMUST00000160249.8	ENSMUSG00000041528.16	Rnf123	chr9	protein_coding	ring finger protein 123
chr9	107955096	107956374	-	107955096	107960465	A5SS	0.16	50	50	ENSMUST00000160249.8	ENSMUSG00000041528.16	Rnf123	chr9	protein_coding	ring finger protein 123
chr9	107955096	107956468	-	107955096	107960465	A5SS	0.16	50	50	ENSMUST00000160249.8	ENSMUSG00000041528.16	Rnf123	chr9	protein_coding	ring finger protein 123
chr9	107955096	107956889	-	107955096	107960465	A5SS	0.16	50	50	ENSMUST00000160249.8	ENSMUSG00000041528.16	Rnf123	chr9	protein_coding	ring finger protein 123
chr9	107955096	107956889	-	107955096	107955999	5pMXE	0.16	50	50	ENSMUST00000162355.8	ENSMUSG00000041528.16	Rnf123	chr9	protein_coding	ring finger protein 123
chr9	107955096	107960023	-	107955096	107955999	5pMXE	0.16	50	50	ENSMUST00000162355.8	ENSMUSG00000041528.16	Rnf123	chr9	protein_coding	ring finger protein 123
chr9	107955096	107956374	-	107955096	107955999	A5SS	0.16	50	50	ENSMUST00000162355.8	ENSMUSG00000041528.16	Rnf123	chr9	protein_coding	ring finger protein 123
chr9	107955096	107956468	-	107955096	107955999	A5SS	0.16	50	50	ENSMUST00000162355.8	ENSMUSG00000041528.16	Rnf123	chr9	protein_coding	ring finger protein 123
chr9	107955096	107956889	-	107955096	107956468	5pMXE	0.16	50	50	ENSMUST00000178267.8	ENSMUSG00000041528.16	Rnf123	chr9	protein_coding	ring finger protein 123
chr9	107955096	107960023	-	107955096	107956468	5pMXE	0.16	50	50	ENSMUST00000178267.8	ENSMUSG00000041528.16	Rnf123	chr9	protein_coding	ring finger protein 123
chr9	107955038	107956468	-	107955096	107956468	A3SS	0.5	50	50	ENSMUST00000178267.8	ENSMUSG00000041528.16	Rnf123	chr9	protein_coding	ring finger protein 123
chr9	107955096	107956374	-	107955096	107956468	A5SS	0.16	50	50	ENSMUST00000178267.8	ENSMUSG00000041528.16	Rnf123	chr9	protein_coding	ring finger protein 123
chr9	107955096	107960023	-	107955096	107956889	5pMXE	0.16	50	50	ENSMUST00000161673.8	ENSMUSG00000041528.16	Rnf123	chr9	protein_coding	ring finger protein 123
chr9	107955096	107956374	-	107955096	107956889	A5SS	0.16	50	50	ENSMUST00000161673.8	ENSMUSG00000041528.16	Rnf123	chr9	protein_coding	ring finger protein 123
chr9	107955096	107960023	-	107955096	107956374	5pMXE	0.16	50	50	ENSMUST00000162516.3	ENSMUSG00000041528.16	Rnf123	chr9	protein_coding	ring finger protein 123
chr9	107957729	107958373	+	107957729	107958344	A3SS	0.5	50	50	ENSMUST00000035211.14	ENSMUSG00000032591.16	Mst1	chr9	protein_coding	macrophage stimulating 1 (hepatocyte growth factor-like)
chr9	107959520	107959691	+	107959520	107959664	A3SS	0.5	50	50	ENSMUST00000035211.14	ENSMUSG00000032591.16	Mst1	chr9	protein_coding	macrophage stimulating 1 (hepatocyte growth factor-like)
chr9	107961784	107961973	+	107961831	107961973	A5SS	0.5	50	50	ENSMUST00000035211.14	ENSMUSG00000032591.16	Mst1	chr9	protein_coding	macrophage stimulating 1 (hepatocyte growth factor-like)
chr9	107964302	107964380	-	107964257	107964380	A3SS	0.5	50	50	ENSMUST00000081309.13	ENSMUSG00000032590.15	Apeh	chr9	protein_coding	acylpeptide hydrolase
chr9	107965113	107965460	-	107965060	107965460	A3SS	0.5	50	50	ENSMUST00000081309.13	ENSMUSG00000032590.15	Apeh	chr9	protein_coding	acylpeptide hydrolase
chr9	107985385	107987261	-	107985385	107987084	A5SS	0.5	50	50	ENSMUST00000035208.14	ENSMUSG00000032589.15	Bsn	chr9	protein_coding	bassoon
chr9	108014340	108014616	+	108010989	108014616	A5SS	0.5	50	50	ENSMUST00000194283.6	ENSMUSG00000102224.6	4930447F24Rik	chr9	lncRNA	RIKEN cDNA 4930447F24 gene
chr9	108095609	108140979	-	108095609;108130356	108130300;108140979	ES	0.5	50	50	ENSMUST00000191899.6	ENSMUSG00000039952.16	Dag1	chr9	protein_coding	dystroglycan 1
chr9	108095609;108120222	108120088;108130300	-	108095609	108130300	cassetteExon	0.5	100	100	ENSMUST00000191899.6	ENSMUSG00000039952.16	Dag1	chr9	protein_coding	dystroglycan 1
chr9	108095609	108130208	-	108095609	108130300	A5SS	0.25	50	50	ENSMUST00000191899.6	ENSMUSG00000039952.16	Dag1	chr9	protein_coding	dystroglycan 1
chr9	108130356	108140680	-	108130356	108140979	A5SS	0.33	50	50	ENSMUST00000191899.6	ENSMUSG00000039952.16	Dag1	chr9	protein_coding	dystroglycan 1
chr9	108130356	108140824	-	108130356	108140979	A5SS	0.33	50	50	ENSMUST00000191899.6	ENSMUSG00000039952.16	Dag1	chr9	protein_coding	dystroglycan 1
chr9	108095609	108140979	-	108095609	108130300	A5SS&ES	0.25	50	50	ENSMUST00000080435.9	ENSMUSG00000039952.16	Dag1	chr9	protein_coding	dystroglycan 1
chr9	108130356	108140680	-	108130356	108140824	A5SS	0.33	50	50	ENSMUST00000080435.9	ENSMUSG00000039952.16	Dag1	chr9	protein_coding	dystroglycan 1
chr9	108095609;108130356	108130208;108140979	-	108095609	108140979	cassetteExon	0.5	100	100	ENSMUST00000166905.8	ENSMUSG00000039952.16	Dag1	chr9	protein_coding	dystroglycan 1
chr9	108095609	108120088	-	108095609	108140979	A5SS	0.25	50	50	ENSMUST00000166905.8	ENSMUSG00000039952.16	Dag1	chr9	protein_coding	dystroglycan 1
chr9	108095609	108120088	-	108095609	108130208	A5SS	0.33	50	50	ENSMUST00000195429.6	ENSMUSG00000039952.16	Dag1	chr9	protein_coding	dystroglycan 1
chr9	108168192	108170535	+	108167861	108170535	A5SS	0.5	50	50	ENSMUST00000035227.8	ENSMUSG00000032606.8	Nicn1	chr9	protein_coding	nicolin 1
chr9	108174224	108174327	+	108174224	108174341	A3SS	0.5	50	50	ENSMUST00000160025.8	ENSMUSG00000032607.13	Amt	chr9	protein_coding	aminomethyltransferase
chr9	108181403	108182525	-	108181452	108182525	A3SS	0.5	50	50	ENSMUST00000044725.9	ENSMUSG00000039461.13	Tcta	chr9	protein_coding	T cell leukemia translocation altered gene
chr9	108182579	108182921	-	108182627	108182921	A3SS	0.5	50	50	ENSMUST00000044725.9	ENSMUSG00000039461.13	Tcta	chr9	protein_coding	T cell leukemia translocation altered gene
chr9	108184142	108192507	+	108183752	108192507	A5SS	0.33	50	50	ENSMUST00000007959.14	ENSMUSG00000007815.14	Rhoa	chr9	protein_coding	ras homolog family member A
chr9	108184275	108192507	+	108183752	108192507	A5SS	0.33	50	50	ENSMUST00000007959.14	ENSMUSG00000007815.14	Rhoa	chr9	protein_coding	ras homolog family member A
chr9	108184142	108192507	+	108184275	108192507	A5SS	0.33	50	50	ENSMUST00000194701.6	ENSMUSG00000007815.14	Rhoa	chr9	protein_coding	ras homolog family member A
chr9	108216757	108216979	+	108216757	108216976	A3SS	0.5	50	50	ENSMUST00000082429.8	ENSMUSG00000063856.9	Gpx1	chr9	protein_coding	glutathione peroxidase 1
chr9	108240097	108243960	+	108240097;108243169	108243029;108243960	ES	0.5	50	50	ENSMUST00000035237.12	ENSMUSG00000032612.15	Usp4	chr9	protein_coding	ubiquitin specific peptidase 4 (proto-oncogene)
chr9	108258751	108261596	+	108258751;108261354	108261284;108261596	ES	0.5	50	50	ENSMUST00000035237.12	ENSMUSG00000032612.15	Usp4	chr9	protein_coding	ubiquitin specific peptidase 4 (proto-oncogene)
chr9	108262155	108268179	+	108262155;108265579	108265476;108268179	ES	0.5	50	50	ENSMUST00000035237.12	ENSMUSG00000032612.15	Usp4	chr9	protein_coding	ubiquitin specific peptidase 4 (proto-oncogene)
chr9	108233740	108234666	+	108233740	108237294	A3SS	0.5	50	50	ENSMUST00000035237.12	ENSMUSG00000032612.15	Usp4	chr9	protein_coding	ubiquitin specific peptidase 4 (proto-oncogene)
chr9	108261354	108261581	+	108261354	108261596	A3SS	0.5	50	50	ENSMUST00000035237.12	ENSMUSG00000032612.15	Usp4	chr9	protein_coding	ubiquitin specific peptidase 4 (proto-oncogene)
chr9	108258751	108261596	+	108258751	108261284	A3SS&ES	0.5	50	50	ENSMUST00000193288.6	ENSMUSG00000032612.15	Usp4	chr9	protein_coding	ubiquitin specific peptidase 4 (proto-oncogene)
chr9	108272584	108274392	+	108272584	108288028	A3SS	0.5	50	50	ENSMUST00000192995.6	ENSMUSG00000032611.10	1700102P08Rik	chr9	protein_coding	RIKEN cDNA 1700102P08 gene
chr9	108315736	108322296	+	108315736	108322399	A3SS	0.5	50	50	ENSMUST00000057265.8	ENSMUSG00000050641.8	BC048562	chr9	protein_coding	cDNA sequence BC048562
chr9	108313758	108315623	+	108313778	108315623	A5SS	0.5	50	50	ENSMUST00000057265.8	ENSMUSG00000050641.8	BC048562	chr9	protein_coding	cDNA sequence BC048562
chr9	108332110	108335876	-	108332110;108332774	108332593;108335876	ES	0.5	50	50	ENSMUST00000193286.6	ENSMUSG00000032609.13	Klhdc8b	chr9	protein_coding	kelch domain containing 8B
chr9	108332072	108332593	-	108332110	108332593	A3SS	0.5	50	50	ENSMUST00000193286.6	ENSMUSG00000032609.13	Klhdc8b	chr9	protein_coding	kelch domain containing 8B
chr9	108326984	108327478	-	108326984	108328075	A5SS	0.5	50	50	ENSMUST00000193286.6	ENSMUSG00000032609.13	Klhdc8b	chr9	protein_coding	kelch domain containing 8B
chr9	108328590	108329806	-	108328590	108329516	A5SS	0.5	50	50	ENSMUST00000193286.6	ENSMUSG00000032609.13	Klhdc8b	chr9	protein_coding	kelch domain containing 8B
chr9	108336035	108338010	-	108336035	108336424	A5SS&ES	0.5	50	50	ENSMUST00000193286.6	ENSMUSG00000032609.13	Klhdc8b	chr9	protein_coding	kelch domain containing 8B
chr9	108336508	108336702	-	108336508	108338652	A5SS	0.25	50	50	ENSMUST00000193286.6	ENSMUSG00000032609.13	Klhdc8b	chr9	protein_coding	kelch domain containing 8B
chr9	108336508	108338010	-	108336508	108338652	A5SS	0.25	50	50	ENSMUST00000193286.6	ENSMUSG00000032609.13	Klhdc8b	chr9	protein_coding	kelch domain containing 8B
chr9	108336508	108338015	-	108336508	108338652	A5SS	0.25	50	50	ENSMUST00000193286.6	ENSMUSG00000032609.13	Klhdc8b	chr9	protein_coding	kelch domain containing 8B
chr9	108336035	108338010	-	108336035;108336508	108336424;108338010	ES	0.5	50	50	ENSMUST00000193895.6	ENSMUSG00000032609.13	Klhdc8b	chr9	protein_coding	kelch domain containing 8B
chr9	108332110	108335876	-	108332774	108335876	A3SS&ES	0.5	50	50	ENSMUST00000193895.6	ENSMUSG00000032609.13	Klhdc8b	chr9	protein_coding	kelch domain containing 8B
chr9	108336508	108336702	-	108336508	108338010	A5SS	0.25	50	50	ENSMUST00000193895.6	ENSMUSG00000032609.13	Klhdc8b	chr9	protein_coding	kelch domain containing 8B
chr9	108336508	108338015	-	108336508	108338010	A5SS	0.25	50	50	ENSMUST00000193895.6	ENSMUSG00000032609.13	Klhdc8b	chr9	protein_coding	kelch domain containing 8B
chr9	108336508	108336702	-	108336508	108338015	A5SS	0.25	50	50	ENSMUST00000192196.6	ENSMUSG00000032609.13	Klhdc8b	chr9	protein_coding	kelch domain containing 8B
chr9	108332110	108335876	-	108332110	108332593	5pMXE	0.5	50	50	ENSMUST00000193331.2	ENSMUSG00000032609.13	Klhdc8b	chr9	protein_coding	kelch domain containing 8B
chr9	108337787	108340137	+	108337816	108340137	A5SS	0.33	50	50	ENSMUST00000061209.7	ENSMUSG00000049305.7	Ccdc71	chr9	protein_coding	coiled-coil domain containing 71
chr9	108338793	108340137	+	108337816	108340137	A5SS	0.33	50	50	ENSMUST00000061209.7	ENSMUSG00000049305.7	Ccdc71	chr9	protein_coding	coiled-coil domain containing 71
chr9	108338793	108340137	+	108337787	108340137	A5SS	0.33	50	50	ENSMUST00000193269.2	ENSMUSG00000049305.7	Ccdc71	chr9	protein_coding	coiled-coil domain containing 71
chr9	108357113	108357257	+	108357173	108357257	A5SS	0.33	50	50	ENSMUST00000194147.2	ENSMUSG00000052911.10	Lamb2	chr9	protein_coding	laminin, beta 2
chr9	108357168	108357257	+	108357173	108357257	A5SS	0.33	50	50	ENSMUST00000194147.2	ENSMUSG00000052911.10	Lamb2	chr9	protein_coding	laminin, beta 2
chr9	108357113	108357257	+	108357168	108357257	A5SS	0.33	50	50	ENSMUST00000195483.6	ENSMUSG00000052911.10	Lamb2	chr9	protein_coding	laminin, beta 2
chr9	108371722	108372011	+	108371722;108371897	108371826;108372011	ES	0.33	50	50	ENSMUST00000006854.13	ENSMUSG00000006676.17	Usp19	chr9	protein_coding	ubiquitin specific peptidase 19
chr9	108377468	108379039	+	108377468	108378393	3pMXE	0.5	50	50	ENSMUST00000006854.13	ENSMUSG00000006676.17	Usp19	chr9	protein_coding	ubiquitin specific peptidase 19
chr9	108370682	108370760	+	108370682	108370763	A3SS	0.5	50	50	ENSMUST00000006854.13	ENSMUSG00000006676.17	Usp19	chr9	protein_coding	ubiquitin specific peptidase 19
chr9	108372126	108372239	+	108372126	108372233	A3SS	0.5	50	50	ENSMUST00000006854.13	ENSMUSG00000006676.17	Usp19	chr9	protein_coding	ubiquitin specific peptidase 19
chr9	108375235	108375331	+	108375235	108375322	A3SS	0.5	50	50	ENSMUST00000006854.13	ENSMUSG00000006676.17	Usp19	chr9	protein_coding	ubiquitin specific peptidase 19
chr9	108370912	108371215	+	108371062	108371215	A5SS	0.5	50	50	ENSMUST00000006854.13	ENSMUSG00000006676.17	Usp19	chr9	protein_coding	ubiquitin specific peptidase 19
chr9	108371886	108372011	+	108371897	108372011	A5SS	0.33	50	50	ENSMUST00000006854.13	ENSMUSG00000006676.17	Usp19	chr9	protein_coding	ubiquitin specific peptidase 19
chr9	108375768	108375879	+	108375778	108375879	A5SS	0.5	50	50	ENSMUST00000006854.13	ENSMUSG00000006676.17	Usp19	chr9	protein_coding	ubiquitin specific peptidase 19
chr9	108371722;108371886	108371826;108372011	+	108371722	108372011	cassetteExon	0.5	100	100	ENSMUST00000166103.9	ENSMUSG00000006676.17	Usp19	chr9	protein_coding	ubiquitin specific peptidase 19
chr9	108371722	108372011	+	108371897	108372011	5pMXE	0.33	50	50	ENSMUST00000194171.6	ENSMUSG00000006676.17	Usp19	chr9	protein_coding	ubiquitin specific peptidase 19
chr9	108385398	108386076	+	108385398;108385729	108385582;108386076	ES	0.33	50	50	ENSMUST00000006838.16	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108387547	108388530	+	108387547;108388409	108388338;108388530	ES	0.5	50	50	ENSMUST00000006838.16	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108388409	108388731	+	108388409;108388615	108388530;108388731	ES	0.5	50	50	ENSMUST00000006838.16	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108388615	108389682	+	108388615;108388817	108388731;108389682	ES	0.5	50	50	ENSMUST00000006838.16	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108390395	108390868	+	108390395;108390577	108390485;108390868	ES	0.5	50	50	ENSMUST00000006838.16	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108392072	108392306	+	108392072;108392232	108392166;108392306	ES	0.33	50	50	ENSMUST00000006838.16	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108392232	108392995	+	108392232;108392431	108392306;108392995	ES	0.5	50	50	ENSMUST00000006838.16	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108388817	108389630	+	108388817	108389682	A3SS	0.5	50	50	ENSMUST00000006838.16	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108390577	108390923	+	108390577	108390868	A3SS	0.5	50	50	ENSMUST00000006838.16	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108392232	108392319	+	108392232	108392306	A3SS	0.25	50	50	ENSMUST00000006838.16	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108392232	108392331	+	108392232	108392306	A3SS	0.25	50	50	ENSMUST00000006838.16	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108385107	108385582	+	108385398	108385582	A5SS	0.33	50	50	ENSMUST00000006838.16	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108385362	108385582	+	108385398	108385582	A5SS	0.33	50	50	ENSMUST00000006838.16	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108385680	108386076	+	108385729	108386076	A5SS	0.33	50	50	ENSMUST00000006838.16	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108386203	108386348	+	108386185	108386348	A5SS	0.5	50	50	ENSMUST00000006838.16	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108386672	108388338	+	108387547	108388338	A5SS&ES	0.5	50	50	ENSMUST00000006838.16	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108386925	108387294	+	108386704	108387294	A5SS	0.5	50	50	ENSMUST00000006838.16	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108389768	108389899	+	108389781	108389899	A5SS	0.5	50	50	ENSMUST00000006838.16	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108392028	108392166	+	108392072	108392166	A5SS	0.33	50	50	ENSMUST00000006838.16	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108392043	108392166	+	108392072	108392166	A5SS	0.33	50	50	ENSMUST00000006838.16	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108387547;108388615	108388530;108388731	+	108387547;108388409	108388338;108388731	MXE	0.5	100	100	ENSMUST00000208069.2	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108385362	108385582	+	108385107	108385582	A5SS	0.33	50	50	ENSMUST00000208102.2	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108385398	108386076	+	108385729	108386076	A5SS&ES	0.33	50	50	ENSMUST00000208102.2	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108388409;108388817	108388731;108389682	+	108388409;108388615	108388530;108389682	MXE	0.5	100	100	ENSMUST00000207810.2	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108385398	108386076	+	108385398	108385582	A3SS	0.5	50	50	ENSMUST00000141201.7	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108388615	108389682	+	108388615	108388731	3pMXE	0.5	50	50	ENSMUST00000154324.3	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108388409	108388731	+	108388409	108388530	3pMXE	0.5	50	50	ENSMUST00000208162.2	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108385398;108385680	108385582;108386076	+	108385398	108386076	cassetteExon	0.5	100	100	ENSMUST00000208162.2	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108387547;108388615	108388530;108389682	+	108387547;108388817	108388338;108389682	MXE	0.5	100	100	ENSMUST00000207947.2	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108391179	108392306	+	108391179	108391264	A3SS&ES	0.5	50	50	ENSMUST00000207126.2	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108392072	108392306	+	108392072	108392166	A3SS	0.5	50	50	ENSMUST00000207126.2	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108387547	108388530	+	108388409	108388530	5pMXE	0.5	50	50	ENSMUST00000208074.2	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108388615	108389682	+	108388817	108389682	5pMXE	0.5	50	50	ENSMUST00000192659.2	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108390395	108390868	+	108390395	108390485	3pMXE	0.5	50	50	ENSMUST00000192659.2	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108390395	108390868	+	108390577	108390868	A5SS	0.5	50	50	ENSMUST00000131005.8	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108392072	108392306	+	108391179	108392306	A5SS	0.33	50	50	ENSMUST00000141903.4	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108392232	108392306	+	108391179	108392306	A5SS	0.33	50	50	ENSMUST00000141903.4	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108392043	108392166	+	108392028	108392166	A5SS	0.33	50	50	ENSMUST00000194045.7	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108392072	108392306	+	108392232	108392306	A5SS&ES	0.5	50	50	ENSMUST00000194045.7	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108392232	108392995	+	108392232;108392431	108392319;108392995	ES	0.5	50	50	ENSMUST00000208506.2	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108392232	108392331	+	108392232	108392319	A3SS	0.25	50	50	ENSMUST00000208506.2	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108392072;108392431	108392306;108392995	+	108392072;108392232	108392166;108392995	MXE	0.5	100	100	ENSMUST00000208177.2	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108392232;108392431	108392331;108392995	+	108392232	108392995	cassetteExon	0.5	100	100	ENSMUST00000208177.2	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108392232	108392995	+	108392431	108392995	A5SS	0.5	50	50	ENSMUST00000137655.3	ENSMUSG00000032604.17	Qars	chr9	protein_coding	glutaminyl-tRNA synthetase
chr9	108406117	108418887	+	108406117	108410786	3pMXE	0.5	50	50	ENSMUST00000195563.6	ENSMUSG00000006673.15	Qrich1	chr9	protein_coding	glutamine-rich 1
chr9	108394451;108396025	108395902;108405788	+	108394451	108405788	cassetteExon	0.5	100	100	ENSMUST00000195563.6	ENSMUSG00000006673.15	Qrich1	chr9	protein_coding	glutamine-rich 1
chr9	108394451;108396025	108395966;108405788	+	108394451	108405788	cassetteExon	0.5	100	100	ENSMUST00000195563.6	ENSMUSG00000006673.15	Qrich1	chr9	protein_coding	glutamine-rich 1
chr9	108394439	108405788	+	108394451	108405788	A5SS	0.33	50	50	ENSMUST00000195563.6	ENSMUSG00000006673.15	Qrich1	chr9	protein_coding	glutamine-rich 1
chr9	108394439	108405788	+	108394439;108396025	108395966;108405788	ES	0.33	50	50	ENSMUST00000195513.6	ENSMUSG00000006673.15	Qrich1	chr9	protein_coding	glutamine-rich 1
chr9	108394439	108395902	+	108394439	108395966	A3SS	0.33	50	50	ENSMUST00000195513.6	ENSMUSG00000006673.15	Qrich1	chr9	protein_coding	glutamine-rich 1
chr9	108394451	108395966	+	108394439	108395966	A5SS	0.33	50	50	ENSMUST00000195513.6	ENSMUSG00000006673.15	Qrich1	chr9	protein_coding	glutamine-rich 1
chr9	108394451	108405788	+	108396025	108405788	A5SS&ES	0.33	50	50	ENSMUST00000195513.6	ENSMUSG00000006673.15	Qrich1	chr9	protein_coding	glutamine-rich 1
chr9	108395175	108395966	+	108394439	108395966	A5SS	0.33	50	50	ENSMUST00000195513.6	ENSMUSG00000006673.15	Qrich1	chr9	protein_coding	glutamine-rich 1
chr9	108395175	108395966	+	108395175	108395902	A3SS	0.5	50	50	ENSMUST00000192331.2	ENSMUSG00000006673.15	Qrich1	chr9	protein_coding	glutamine-rich 1
chr9	108394439	108395902	+	108395175	108395902	A5SS	0.33	50	50	ENSMUST00000192331.2	ENSMUSG00000006673.15	Qrich1	chr9	protein_coding	glutamine-rich 1
chr9	108394451	108395902	+	108395175	108395902	A5SS	0.33	50	50	ENSMUST00000192331.2	ENSMUSG00000006673.15	Qrich1	chr9	protein_coding	glutamine-rich 1
chr9	108406117	108418887	+	108406117;108411817	108410786;108418887	ES	0.5	50	50	ENSMUST00000193258.6	ENSMUSG00000006673.15	Qrich1	chr9	protein_coding	glutamine-rich 1
chr9	108394439;108396025	108395902;108405788	+	108394439	108405788	cassetteExon	0.5	100	100	ENSMUST00000193258.6	ENSMUSG00000006673.15	Qrich1	chr9	protein_coding	glutamine-rich 1
chr9	108394451	108395902	+	108394439	108395902	A5SS	0.33	50	50	ENSMUST00000006851.15	ENSMUSG00000006673.15	Qrich1	chr9	protein_coding	glutamine-rich 1
chr9	108394451	108395902	+	108394451	108395966	A3SS	0.33	50	50	ENSMUST00000192932.6	ENSMUSG00000006673.15	Qrich1	chr9	protein_coding	glutamine-rich 1
chr9	108394439	108405788	+	108396025	108405788	A5SS&ES	0.33	50	50	ENSMUST00000192932.6	ENSMUSG00000006673.15	Qrich1	chr9	protein_coding	glutamine-rich 1
chr9	108395175	108395966	+	108394451	108395966	A5SS	0.33	50	50	ENSMUST00000192932.6	ENSMUSG00000006673.15	Qrich1	chr9	protein_coding	glutamine-rich 1
chr9	108411817	108418887	+	108406117	108418887	A5SS	0.5	50	50	ENSMUST00000194385.2	ENSMUSG00000006673.15	Qrich1	chr9	protein_coding	glutamine-rich 1
chr9	108438897	108439373	+	108438897;108439056	108438982;108439373	ES	0.5	50	50	ENSMUST00000081111.14	ENSMUSG00000062867.14	Impdh2	chr9	protein_coding	inosine monophosphate dehydrogenase 2
chr9	108440890;108441183	108441112;108441834	+	108440890	108441834	cassetteExon	0.5	100	100	ENSMUST00000081111.14	ENSMUSG00000062867.14	Impdh2	chr9	protein_coding	inosine monophosphate dehydrogenase 2
chr9	108438897	108439373	+	108439056	108439373	A5SS	0.5	50	50	ENSMUST00000194365.2	ENSMUSG00000062867.14	Impdh2	chr9	protein_coding	inosine monophosphate dehydrogenase 2
chr9	108443458	108443755	-	108443458;108443606	108443540;108443755	ES	0.5	50	50	ENSMUST00000074208.6	ENSMUSG00000070283.5	Ndufaf3	chr9	protein_coding	NADH:ubiquinone oxidoreductase complex assembly factor 3
chr9	108447644	108447821	+	108447644	108447763	A3SS	0.5	50	50	ENSMUST00000019183.14	ENSMUSG00000019039.15	Dalrd3	chr9	protein_coding	DALR anticodon binding domain containing 3
chr9	108448372	108448635	+	108448372	108448645	A3SS	0.5	50	50	ENSMUST00000019183.14	ENSMUSG00000019039.15	Dalrd3	chr9	protein_coding	DALR anticodon binding domain containing 3
chr9	108449660	108449724	+	108449660	108449750	A3SS	0.5	50	50	ENSMUST00000019183.14	ENSMUSG00000019039.15	Dalrd3	chr9	protein_coding	DALR anticodon binding domain containing 3
chr9	108459203;108459378	108459281;108460046	-	108459203	108460046	cassetteExon	0.5	100	100	ENSMUST00000006853.11	ENSMUSG00000006675.11	P4htm	chr9	protein_coding	prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)
chr9	108460335	108460841	-	108460142	108460841	A3SS	0.5	50	50	ENSMUST00000006853.11	ENSMUSG00000006675.11	P4htm	chr9	protein_coding	prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)
chr9	108456507	108456622	-	108456507	108456915	A5SS	0.5	50	50	ENSMUST00000006853.11	ENSMUSG00000006675.11	P4htm	chr9	protein_coding	prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)
chr9	108485952	108487096	-	108485952;108486998	108486977;108487096	ES	0.5	50	50	ENSMUST00000013338.14	ENSMUSG00000064145.13	Arih2	chr9	protein_coding	ariadne RBR E3 ubiquitin protein ligase 2
chr9	108497325;108506533	108506488;108521225	-	108497325	108521225	cassetteExon	0.5	100	100	ENSMUST00000013338.14	ENSMUSG00000064145.13	Arih2	chr9	protein_coding	ariadne RBR E3 ubiquitin protein ligase 2
chr9	108482671	108484487	-	108482616	108484487	A3SS	0.33	50	50	ENSMUST00000013338.14	ENSMUSG00000064145.13	Arih2	chr9	protein_coding	ariadne RBR E3 ubiquitin protein ligase 2
chr9	108482903	108484487	-	108482616	108484487	A3SS	0.33	50	50	ENSMUST00000013338.14	ENSMUSG00000064145.13	Arih2	chr9	protein_coding	ariadne RBR E3 ubiquitin protein ligase 2
chr9	108487291	108488832	-	108487146	108488832	A3SS	0.5	50	50	ENSMUST00000013338.14	ENSMUSG00000064145.13	Arih2	chr9	protein_coding	ariadne RBR E3 ubiquitin protein ligase 2
chr9	108494017	108497258	-	108494634	108497258	A3SS&ES	0.5	50	50	ENSMUST00000013338.14	ENSMUSG00000064145.13	Arih2	chr9	protein_coding	ariadne RBR E3 ubiquitin protein ligase 2
chr9	108521564	108522132	-	108521567	108522132	A3SS	0.5	50	50	ENSMUST00000013338.14	ENSMUSG00000064145.13	Arih2	chr9	protein_coding	ariadne RBR E3 ubiquitin protein ligase 2
chr9	108482903	108484487	-	108482671	108484487	A3SS	0.33	50	50	ENSMUST00000194073.6	ENSMUSG00000064145.13	Arih2	chr9	protein_coding	ariadne RBR E3 ubiquitin protein ligase 2
chr9	108494027	108494571	-	108491034	108494571	A3SS	0.5	50	50	ENSMUST00000193197.6	ENSMUSG00000064145.13	Arih2	chr9	protein_coding	ariadne RBR E3 ubiquitin protein ligase 2
chr9	108522193	108526428	-	108497325	108526428	A3SS	0.5	50	50	ENSMUST00000193197.6	ENSMUSG00000064145.13	Arih2	chr9	protein_coding	ariadne RBR E3 ubiquitin protein ligase 2
chr9	108491034	108492224	-	108491034	108494571	A5SS	0.5	50	50	ENSMUST00000193197.6	ENSMUSG00000064145.13	Arih2	chr9	protein_coding	ariadne RBR E3 ubiquitin protein ligase 2
chr9	108497325	108506488	-	108497325	108526428	A5SS	0.33	50	50	ENSMUST00000193197.6	ENSMUSG00000064145.13	Arih2	chr9	protein_coding	ariadne RBR E3 ubiquitin protein ligase 2
chr9	108497325	108521225	-	108497325	108526428	A5SS	0.33	50	50	ENSMUST00000193197.6	ENSMUSG00000064145.13	Arih2	chr9	protein_coding	ariadne RBR E3 ubiquitin protein ligase 2
chr9	108491034;108494634	108494571;108497258	-	108491034;108494017	108492224;108497258	MXE	0.5	100	100	ENSMUST00000193552.6	ENSMUSG00000064145.13	Arih2	chr9	protein_coding	ariadne RBR E3 ubiquitin protein ligase 2
chr9	108497325	108521225	-	108497325	108506488	5pMXE	0.33	50	50	ENSMUST00000195741.6	ENSMUSG00000064145.13	Arih2	chr9	protein_coding	ariadne RBR E3 ubiquitin protein ligase 2
chr9	108569911	108591472	+	108566771	108591472	A5SS	0.5	50	50	ENSMUST00000192344.2	ENSMUSG00000032601.14	Prkar2a	chr9	protein_coding	protein kinase, cAMP dependent regulatory, type II alpha
chr9	108617961	108622681	+	108617961;108621494	108621429;108622681	ES	0.5	50	50	ENSMUST00000035220.12	ENSMUSG00000032601.14	Prkar2a	chr9	protein_coding	protein kinase, cAMP dependent regulatory, type II alpha
chr9	108617961	108622681	+	108617961	108621429	3pMXE	0.5	50	50	ENSMUST00000192068.2	ENSMUSG00000032601.14	Prkar2a	chr9	protein_coding	protein kinase, cAMP dependent regulatory, type II alpha
chr9	108673595	108675309	+	108673595	108674406	3pMXE	0.14	50	50	ENSMUST00000192307.6	ENSMUSG00000032599.13	Ip6k2	chr9	protein_coding	inositol hexaphosphate kinase 2
chr9	108673595	108675470	+	108673595	108674406	3pMXE	0.14	50	50	ENSMUST00000192307.6	ENSMUSG00000032599.13	Ip6k2	chr9	protein_coding	inositol hexaphosphate kinase 2
chr9	108673595	108675539	+	108673595	108674406	3pMXE	0.14	50	50	ENSMUST00000192307.6	ENSMUSG00000032599.13	Ip6k2	chr9	protein_coding	inositol hexaphosphate kinase 2
chr9	108673595;108673982	108673740;108674406	+	108673595	108674406	cassetteExon	0.5	100	100	ENSMUST00000192307.6	ENSMUSG00000032599.13	Ip6k2	chr9	protein_coding	inositol hexaphosphate kinase 2
chr9	108673595;108673982	108673854;108674406	+	108673595	108674406	cassetteExon	0.5	100	100	ENSMUST00000192307.6	ENSMUSG00000032599.13	Ip6k2	chr9	protein_coding	inositol hexaphosphate kinase 2
chr9	108673595	108674483	+	108673595	108674406	A3SS	0.14	50	50	ENSMUST00000192307.6	ENSMUSG00000032599.13	Ip6k2	chr9	protein_coding	inositol hexaphosphate kinase 2
chr9	108673595	108673740	+	108673595	108675539	A3SS	0.14	50	50	ENSMUST00000193560.6	ENSMUSG00000032599.13	Ip6k2	chr9	protein_coding	inositol hexaphosphate kinase 2
chr9	108673595	108673854	+	108673595	108675539	A3SS	0.14	50	50	ENSMUST00000193560.6	ENSMUSG00000032599.13	Ip6k2	chr9	protein_coding	inositol hexaphosphate kinase 2
chr9	108673595	108674483	+	108673595	108675539	A3SS	0.14	50	50	ENSMUST00000193560.6	ENSMUSG00000032599.13	Ip6k2	chr9	protein_coding	inositol hexaphosphate kinase 2
chr9	108673595	108675309	+	108673595	108675539	A3SS	0.14	50	50	ENSMUST00000193560.6	ENSMUSG00000032599.13	Ip6k2	chr9	protein_coding	inositol hexaphosphate kinase 2
chr9	108673595	108675470	+	108673595	108675539	A3SS	0.14	50	50	ENSMUST00000193560.6	ENSMUSG00000032599.13	Ip6k2	chr9	protein_coding	inositol hexaphosphate kinase 2
chr9	108673595	108674406	+	108673595	108673740	3pMXE	0.14	50	50	ENSMUST00000195580.6	ENSMUSG00000032599.13	Ip6k2	chr9	protein_coding	inositol hexaphosphate kinase 2
chr9	108673595	108674483	+	108673595	108673740	3pMXE	0.14	50	50	ENSMUST00000195580.6	ENSMUSG00000032599.13	Ip6k2	chr9	protein_coding	inositol hexaphosphate kinase 2
chr9	108673595	108675309	+	108673595	108673740	3pMXE	0.14	50	50	ENSMUST00000195580.6	ENSMUSG00000032599.13	Ip6k2	chr9	protein_coding	inositol hexaphosphate kinase 2
chr9	108673595	108675470	+	108673595	108673740	3pMXE	0.14	50	50	ENSMUST00000195580.6	ENSMUSG00000032599.13	Ip6k2	chr9	protein_coding	inositol hexaphosphate kinase 2
chr9	108673595	108673854	+	108673595	108673740	A3SS	0.14	50	50	ENSMUST00000195580.6	ENSMUSG00000032599.13	Ip6k2	chr9	protein_coding	inositol hexaphosphate kinase 2
chr9	108673595;108673771	108673740;108673854	+	108673595	108673854	cassetteExon	0.5	100	100	ENSMUST00000192226.6	ENSMUSG00000032599.13	Ip6k2	chr9	protein_coding	inositol hexaphosphate kinase 2
chr9	108673595	108674483	+	108673595	108673854	A3SS&ES	0.25	50	50	ENSMUST00000192226.6	ENSMUSG00000032599.13	Ip6k2	chr9	protein_coding	inositol hexaphosphate kinase 2
chr9	108673595	108675309	+	108673595	108674483	3pMXE	0.14	50	50	ENSMUST00000194875.6	ENSMUSG00000032599.13	Ip6k2	chr9	protein_coding	inositol hexaphosphate kinase 2
chr9	108673595	108675470	+	108673595	108674483	3pMXE	0.14	50	50	ENSMUST00000194875.6	ENSMUSG00000032599.13	Ip6k2	chr9	protein_coding	inositol hexaphosphate kinase 2
chr9	108673595;108673771	108673740;108674483	+	108673595	108674483	cassetteExon	0.5	100	100	ENSMUST00000194875.6	ENSMUSG00000032599.13	Ip6k2	chr9	protein_coding	inositol hexaphosphate kinase 2
chr9	108673595;108675377	108675309;108675470	+	108673595	108675470	cassetteExon	0.5	100	100	ENSMUST00000195514.6	ENSMUSG00000032599.13	Ip6k2	chr9	protein_coding	inositol hexaphosphate kinase 2
chr9	108673595	108673854	+	108673595	108675470	A3SS	0.14	50	50	ENSMUST00000195514.6	ENSMUSG00000032599.13	Ip6k2	chr9	protein_coding	inositol hexaphosphate kinase 2
chr9	108673595	108673854	+	108673595	108675309	A3SS	0.14	50	50	ENSMUST00000085018.6	ENSMUSG00000032599.13	Ip6k2	chr9	protein_coding	inositol hexaphosphate kinase 2
chr9	108673771	108673870	+	108673771	108673854	A3SS	0.33	50	50	ENSMUST00000194782.6	ENSMUSG00000032599.13	Ip6k2	chr9	protein_coding	inositol hexaphosphate kinase 2
chr9	108673771	108674483	+	108673771	108673854	A3SS&ES	0.33	50	50	ENSMUST00000194782.6	ENSMUSG00000032599.13	Ip6k2	chr9	protein_coding	inositol hexaphosphate kinase 2
chr9	108673771	108674483	+	108673771	108673870	A3SS&ES	0.33	50	50	ENSMUST00000192028.6	ENSMUSG00000032599.13	Ip6k2	chr9	protein_coding	inositol hexaphosphate kinase 2
chr9	108689168	108691148	+	108689168;108689908	108689418;108691148	ES	0.5	50	50	ENSMUST00000035218.9	ENSMUSG00000032598.9	Nckipsd	chr9	protein_coding	NCK interacting protein with SH3 domain
chr9	108685853;108688101	108688021;108688245	+	108685853	108688245	cassetteExon	0.5	100	100	ENSMUST00000035218.9	ENSMUSG00000032598.9	Nckipsd	chr9	protein_coding	NCK interacting protein with SH3 domain
chr9	108685819	108688245	+	108685853	108688245	A5SS	0.33	50	50	ENSMUST00000035218.9	ENSMUSG00000032598.9	Nckipsd	chr9	protein_coding	NCK interacting protein with SH3 domain
chr9	108685819	108688245	+	108688101	108688245	A5SS&ES	0.33	50	50	ENSMUST00000195323.2	ENSMUSG00000032598.9	Nckipsd	chr9	protein_coding	NCK interacting protein with SH3 domain
chr9	108715764;108715973	108715959;108717199	+	108715764	108717199	cassetteExon	0.5	100	100	ENSMUST00000024238.11	ENSMUSG00000023473.14	Celsr3	chr9	protein_coding	cadherin, EGF LAG seven-pass G-type receptor 3
chr9	108709527	108709887	+	108709527	108709893	A3SS	0.5	50	50	ENSMUST00000024238.11	ENSMUSG00000023473.14	Celsr3	chr9	protein_coding	cadherin, EGF LAG seven-pass G-type receptor 3
chr9	108721741	108722241	+	108721741	108722244	A3SS	0.5	50	50	ENSMUST00000024238.11	ENSMUSG00000023473.14	Celsr3	chr9	protein_coding	cadherin, EGF LAG seven-pass G-type receptor 3
chr9	108734249	108734391	+	108734304	108734391	A5SS	0.5	50	50	ENSMUST00000192507.7	ENSMUSG00000023259.18	Slc26a6	chr9	protein_coding	solute carrier family 26, member 6
chr9	108732033	108732976	+	108731385	108732976	A5SS	0.33	50	50	ENSMUST00000192559.7	ENSMUSG00000023259.18	Slc26a6	chr9	protein_coding	solute carrier family 26, member 6
chr9	108732913	108732976	+	108731385	108732976	A5SS	0.33	50	50	ENSMUST00000192559.7	ENSMUSG00000023259.18	Slc26a6	chr9	protein_coding	solute carrier family 26, member 6
chr9	108732913	108732976	+	108732033	108732976	A5SS	0.33	50	50	ENSMUST00000193291.7	ENSMUSG00000023259.18	Slc26a6	chr9	protein_coding	solute carrier family 26, member 6
chr9	108771238	108773758	+	108771238;108773241	108773112;108773758	ES	0.5	50	50	ENSMUST00000026743.14	ENSMUSG00000025651.15	Uqcrc1	chr9	protein_coding	ubiquinol-cytochrome c reductase core protein 1
chr9	108765855	108766135	+	108765855	108766084	A3SS	0.5	50	50	ENSMUST00000026743.14	ENSMUSG00000025651.15	Uqcrc1	chr9	protein_coding	ubiquinol-cytochrome c reductase core protein 1
chr9	108773241	108773704	+	108773241	108773758	A3SS	0.5	50	50	ENSMUST00000026743.14	ENSMUSG00000025651.15	Uqcrc1	chr9	protein_coding	ubiquinol-cytochrome c reductase core protein 1
chr9	108765937	108766084	+	108765855	108766084	A5SS	0.5	50	50	ENSMUST00000026743.14	ENSMUSG00000025651.15	Uqcrc1	chr9	protein_coding	ubiquinol-cytochrome c reductase core protein 1
chr9	108777682	108778503	+	108778082	108778503	A5SS&ES	0.5	50	50	ENSMUST00000026743.14	ENSMUSG00000025651.15	Uqcrc1	chr9	protein_coding	ubiquinol-cytochrome c reductase core protein 1
chr9	108771238	108773758	+	108771238	108773112	A3SS&ES	0.5	50	50	ENSMUST00000195738.2	ENSMUSG00000025651.15	Uqcrc1	chr9	protein_coding	ubiquinol-cytochrome c reductase core protein 1
chr9	108854219;108854706	108854544;108856588	+	108854219	108856588	cassetteExon	0.5	100	100	ENSMUST00000198140.5	ENSMUSG00000025648.19	Pfkfb4	chr9	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4
chr9	108821180	108827910	+	108821180	108827927	A3SS	0.33	50	50	ENSMUST00000198140.5	ENSMUSG00000025648.19	Pfkfb4	chr9	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4
chr9	108821180	108827975	+	108821180	108827927	A3SS	0.33	50	50	ENSMUST00000198140.5	ENSMUSG00000025648.19	Pfkfb4	chr9	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4
chr9	108836816	108837380	+	108836816	108837417	A3SS	0.5	50	50	ENSMUST00000198140.5	ENSMUSG00000025648.19	Pfkfb4	chr9	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4
chr9	108837538	108839410	+	108837538	108839517	A3SS	0.5	50	50	ENSMUST00000198140.5	ENSMUSG00000025648.19	Pfkfb4	chr9	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4
chr9	108828337	108834640	+	108828277	108834640	A5SS	0.5	50	50	ENSMUST00000198140.5	ENSMUSG00000025648.19	Pfkfb4	chr9	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4
chr9	108846661	108854115	+	108840372	108854115	A5SS	0.5	50	50	ENSMUST00000198140.5	ENSMUSG00000025648.19	Pfkfb4	chr9	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4
chr9	108854197	108856588	+	108854219	108856588	A5SS	0.33	50	50	ENSMUST00000198140.5	ENSMUSG00000025648.19	Pfkfb4	chr9	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4
chr9	108821180	108827910	+	108821180	108827975	A3SS	0.33	50	50	ENSMUST00000051873.15	ENSMUSG00000025648.19	Pfkfb4	chr9	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4
chr9	108854706	108856588	+	108854197	108856588	A5SS	0.33	50	50	ENSMUST00000199591.5	ENSMUSG00000025648.19	Pfkfb4	chr9	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4
chr9	108870094	108880435	+	108870094	108880432	A3SS	0.5	50	50	ENSMUST00000112059.10	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108869552	108869938	+	108867832	108869938	A5SS	0.5	50	50	ENSMUST00000112059.10	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108880203	108880432	+	108870094	108880432	A5SS	0.2	50	50	ENSMUST00000112059.10	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108880296	108880432	+	108870094	108880432	A5SS	0.2	50	50	ENSMUST00000112059.10	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108880301	108880432	+	108870094	108880432	A5SS	0.2	50	50	ENSMUST00000112059.10	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108880322	108880432	+	108870094	108880432	A5SS	0.2	50	50	ENSMUST00000112059.10	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108882048	108885046	+	108880521	108885046	A5SS	0.2	50	50	ENSMUST00000112059.10	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108884075	108885046	+	108880521	108885046	A5SS	0.2	50	50	ENSMUST00000112059.10	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108884147	108885046	+	108880521	108885046	A5SS	0.2	50	50	ENSMUST00000112059.10	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108884331	108885046	+	108880521	108885046	A5SS	0.2	50	50	ENSMUST00000112059.10	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108880296	108880435	+	108870094	108880435	A5SS	0.25	50	50	ENSMUST00000026737.12	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108880322	108880435	+	108870094	108880435	A5SS	0.25	50	50	ENSMUST00000026737.12	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108880353	108880435	+	108870094	108880435	A5SS	0.25	50	50	ENSMUST00000026737.12	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108880296	108880432	+	108880203	108880432	A5SS	0.2	50	50	ENSMUST00000198708.5	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108880301	108880432	+	108880203	108880432	A5SS	0.2	50	50	ENSMUST00000198708.5	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108880322	108880432	+	108880203	108880432	A5SS	0.2	50	50	ENSMUST00000198708.5	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108880296	108880432	+	108880296	108880435	A3SS	0.5	50	50	ENSMUST00000200629.5	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108880322	108880435	+	108880296	108880435	A5SS	0.25	50	50	ENSMUST00000200629.5	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108880353	108880435	+	108880296	108880435	A5SS	0.25	50	50	ENSMUST00000200629.5	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108880322	108880435	+	108880322	108880432	A3SS	0.5	50	50	ENSMUST00000197689.5	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108880296	108880432	+	108880322	108880432	A5SS	0.2	50	50	ENSMUST00000197689.5	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108880301	108880432	+	108880322	108880432	A5SS	0.2	50	50	ENSMUST00000197689.5	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108880353	108880435	+	108880322	108880435	A5SS	0.25	50	50	ENSMUST00000196954.5	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108880296	108880432	+	108880301	108880432	A5SS	0.2	50	50	ENSMUST00000198376.5	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108884075	108885046	+	108882048	108885046	A5SS	0.2	50	50	ENSMUST00000198591.5	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108884147	108885046	+	108882048	108885046	A5SS	0.2	50	50	ENSMUST00000198591.5	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108884331	108885046	+	108882048	108885046	A5SS	0.2	50	50	ENSMUST00000198591.5	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108884147	108885046	+	108884075	108885046	A5SS	0.2	50	50	ENSMUST00000154184.5	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108884331	108885046	+	108884075	108885046	A5SS	0.2	50	50	ENSMUST00000154184.5	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108884147	108885046	+	108884331	108885046	A5SS	0.2	50	50	ENSMUST00000200366.5	ENSMUSG00000025647.17	Shisa5	chr9	protein_coding	shisa family member 5
chr9	108887996	108888886	-	108887996	108888715	5pMXE	0.33	50	50	ENSMUST00000061973.5	ENSMUSG00000049734.10	Trex1	chr9	protein_coding	three prime repair exonuclease 1
chr9	108887996	108888257	-	108887996	108888715	A5SS	0.33	50	50	ENSMUST00000061973.5	ENSMUSG00000049734.10	Trex1	chr9	protein_coding	three prime repair exonuclease 1
chr9	108887996	108888886	-	108887996	108888257	5pMXE	0.33	50	50	ENSMUST00000112053.2	ENSMUSG00000049734.10	Trex1	chr9	protein_coding	three prime repair exonuclease 1
chr9	108889580	108890178	-	108889580;108889777	108889697;108890178	ES	0.5	50	50	ENSMUST00000160217.8	ENSMUSG00000025646.10	Atrip	chr9	protein_coding	ATR interacting protein
chr9	108890266	108890600	-	108890269	108890600	A3SS	0.5	50	50	ENSMUST00000160217.8	ENSMUSG00000025646.10	Atrip	chr9	protein_coding	ATR interacting protein
chr9	108890736	108894196	-	108890736	108894281	A5SS	0.5	50	50	ENSMUST00000160217.8	ENSMUSG00000025646.10	Atrip	chr9	protein_coding	ATR interacting protein
chr9	108901805	108902727	-	108901805	108902823	A5SS	0.5	50	50	ENSMUST00000160217.8	ENSMUSG00000025646.10	Atrip	chr9	protein_coding	ATR interacting protein
chr9	108889580	108890178	-	108889777	108890178	3pMXE	0.5	50	50	ENSMUST00000159614.3	ENSMUSG00000025646.10	Atrip	chr9	protein_coding	ATR interacting protein
chr9	108911157	108911395	-	108903969	108911395	A3SS	0.33	50	50	ENSMUST00000192801.2	ENSMUSG00000091537.3	Tma7	chr9	protein_coding	translational machinery associated 7
chr9	108911294	108911395	-	108903969	108911395	A3SS	0.33	50	50	ENSMUST00000192801.2	ENSMUSG00000091537.3	Tma7	chr9	protein_coding	translational machinery associated 7
chr9	108911157	108911395	-	108911157;108911294	108911239;108911395	ES	0.5	50	50	ENSMUST00000167504.3	ENSMUSG00000091537.3	Tma7	chr9	protein_coding	translational machinery associated 7
chr9	108911157	108911395	-	108911294	108911395	A3SS	0.33	50	50	ENSMUST00000192442.2	ENSMUSG00000091537.3	Tma7	chr9	protein_coding	translational machinery associated 7
chr9	108925270	108928339	+	108924713	108928339	A5SS	0.33	50	50	ENSMUST00000072093.13	ENSMUSG00000053646.14	Plxnb1	chr9	protein_coding	plexin B1
chr9	108925882	108928339	+	108924713	108928339	A5SS	0.33	50	50	ENSMUST00000072093.13	ENSMUSG00000053646.14	Plxnb1	chr9	protein_coding	plexin B1
chr9	108934166	108935509	+	108935422	108935509	A5SS&ES	0.5	50	50	ENSMUST00000072093.13	ENSMUSG00000053646.14	Plxnb1	chr9	protein_coding	plexin B1
chr9	108925882	108928339	+	108925270	108928339	A5SS	0.33	50	50	ENSMUST00000131462.8	ENSMUSG00000053646.14	Plxnb1	chr9	protein_coding	plexin B1
chr9	108977296	108986586	-	108977296;108985484	108985366;108986586	ES	0.5	50	50	ENSMUST00000054925.13	ENSMUSG00000047237.14	Fbxw21	chr9	protein_coding	F-box and WD-40 domain protein 21
chr9	108975794	108977087	-	108975773	108977087	A3SS	0.5	50	50	ENSMUST00000054925.13	ENSMUSG00000047237.14	Fbxw21	chr9	protein_coding	F-box and WD-40 domain protein 21
chr9	109021853	109024104	-	109021853;109023914	109023751;109024104	ES	0.5	50	50	ENSMUST00000061456.8	ENSMUSG00000049314.12	Fbxw13	chr9	protein_coding	F-box and WD-40 domain protein 13
chr9	109024141	109024561	-	109024141	109024922	A5SS	0.5	50	50	ENSMUST00000061456.8	ENSMUSG00000049314.12	Fbxw13	chr9	protein_coding	F-box and WD-40 domain protein 13
chr9	109053582	109061337	-	109053582;109055136	109054927;109061337	ES	0.5	50	50	ENSMUST00000079548.12	ENSMUSG00000061701.12	Fbxw20	chr9	protein_coding	F-box and WD-40 domain protein 20
chr9	109100357	109103099	-	109100190	109103099	A3SS	0.5	50	50	ENSMUST00000198048.5	ENSMUSG00000105589.5	Fbxw14	chr9	protein_coding	F-box and WD-40 domain protein 14
chr9	109105383	109107752	-	109105383;109106414	109106256;109107752	ES	0.5	50	50	ENSMUST00000198844.5	ENSMUSG00000105589.5	Fbxw14	chr9	protein_coding	F-box and WD-40 domain protein 14
chr9	109157466	109159824	-	109157466;109158501	109158343;109159824	ES	0.5	50	50	ENSMUST00000112040.9	ENSMUSG00000054087.12	Fbxw28	chr9	protein_coding	F-box and WD-40 domain protein 28
chr9	109152466	109155190	-	109152299	109155190	A3SS	0.5	50	50	ENSMUST00000112040.9	ENSMUSG00000054087.12	Fbxw28	chr9	protein_coding	F-box and WD-40 domain protein 28
chr9	109166562	109167464	-	109166454	109167464	A3SS	0.5	50	50	ENSMUST00000112040.9	ENSMUSG00000054087.12	Fbxw28	chr9	protein_coding	F-box and WD-40 domain protein 28
chr9	109232267	109232456	-	109215835	109232456	A3SS	0.5	50	50	ENSMUST00000197213.2	ENSMUSG00000070324.7	Fbxw22	chr9	protein_coding	F-box and WD-40 domain protein 22
chr9	109215835	109231038	-	109215835	109232456	A5SS	0.5	50	50	ENSMUST00000197213.2	ENSMUSG00000070324.7	Fbxw22	chr9	protein_coding	F-box and WD-40 domain protein 22
chr9	109355115	109361545	-	109355115	109363804	A5SS	0.5	50	50	ENSMUST00000198015.2	ENSMUSG00000104572.6	Fbxw23	chr9	transcribed_unprocessed_pseudogene	F-box and WD-40 domain protein 23
chr9	109388996	109395874	-	109388996	109394403	A5SS&ES	0.5	50	50	ENSMUST00000056745.12	ENSMUSG00000074060.11	Fbxw15	chr9	protein_coding	F-box and WD-40 domain protein 15
chr9	109387372	109388787	-	109384339	109388787	A3SS	0.5	50	50	ENSMUST00000198397.5	ENSMUSG00000074060.11	Fbxw15	chr9	protein_coding	F-box and WD-40 domain protein 15
chr9	109384339	109384629	-	109384339	109388787	A5SS	0.5	50	50	ENSMUST00000198397.5	ENSMUSG00000074060.11	Fbxw15	chr9	protein_coding	F-box and WD-40 domain protein 15
chr9	109595278	109608632	-	109595278;109599245	109599121;109608632	ES	0.5	50	50	ENSMUST00000199430.5	ENSMUSG00000104614.6	Fbxw27	chr9	protein_coding	F-box and WD-40 domain protein 27
chr9	109595278	109601128	-	109595278	109599121	A5SS&ES	0.33	50	50	ENSMUST00000199430.5	ENSMUSG00000104614.6	Fbxw27	chr9	protein_coding	F-box and WD-40 domain protein 27
chr9	109599245	109599541	-	109599245	109608632	A5SS	0.33	50	50	ENSMUST00000199430.5	ENSMUSG00000104614.6	Fbxw27	chr9	protein_coding	F-box and WD-40 domain protein 27
chr9	109599245	109601128	-	109599245	109608632	A5SS	0.33	50	50	ENSMUST00000199430.5	ENSMUSG00000104614.6	Fbxw27	chr9	protein_coding	F-box and WD-40 domain protein 27
chr9	109595278;109599245	109599121;109601128	-	109595278	109601128	cassetteExon	0.5	100	100	ENSMUST00000200610.5	ENSMUSG00000104614.6	Fbxw27	chr9	protein_coding	F-box and WD-40 domain protein 27
chr9	109595278;109599582	109599121;109601128	-	109595278	109601128	cassetteExon	0.5	100	100	ENSMUST00000200610.5	ENSMUSG00000104614.6	Fbxw27	chr9	protein_coding	F-box and WD-40 domain protein 27
chr9	109599719	109601128	-	109595278	109601128	A3SS	0.25	50	50	ENSMUST00000200610.5	ENSMUSG00000104614.6	Fbxw27	chr9	protein_coding	F-box and WD-40 domain protein 27
chr9	109595278	109608632	-	109595278	109599121	5pMXE	0.33	50	50	ENSMUST00000212674.2	ENSMUSG00000104614.6	Fbxw27	chr9	protein_coding	F-box and WD-40 domain protein 27
chr9	109599245	109601128	-	109599245;109599582	109599541;109601128	ES	0.25	50	50	ENSMUST00000211814.2	ENSMUSG00000104614.6	Fbxw27	chr9	protein_coding	F-box and WD-40 domain protein 27
chr9	109599719	109601128	-	109599582	109601128	A3SS	0.25	50	50	ENSMUST00000211814.2	ENSMUSG00000104614.6	Fbxw27	chr9	protein_coding	F-box and WD-40 domain protein 27
chr9	109599245;109599719	109599541;109601128	-	109599245	109601128	cassetteExon	0.5	100	100	ENSMUST00000198666.2	ENSMUSG00000104614.6	Fbxw27	chr9	protein_coding	F-box and WD-40 domain protein 27
chr9	109602350	109602820	-	109602350	109602943	A5SS	0.5	50	50	ENSMUST00000198666.2	ENSMUSG00000104614.6	Fbxw27	chr9	protein_coding	F-box and WD-40 domain protein 27
chr9	109595278	109601128	-	109595278	109608632	A5SS	0.33	50	50	ENSMUST00000197125.3	ENSMUSG00000104614.6	Fbxw27	chr9	protein_coding	F-box and WD-40 domain protein 27
chr9	109649764	109655440	+	109649764;109653619	109653577;109655440	ES	0.5	50	50	ENSMUST00000198988.5	ENSMUSG00000050074.13	Spink8	chr9	protein_coding	serine peptidase inhibitor, Kazal type 8
chr9	109660497	109661415	-	109660497	109661281	A5SS	0.5	50	50	ENSMUST00000144161.2	ENSMUSG00000070282.7	3000002C10Rik	chr9	transcribed_processed_pseudogene	RIKEN cDNA 3000002C10 gene
chr9	109662363	109668676	+	109662363;109664482	109664386;109668676	ES	0.5	50	50	ENSMUST00000200005.5	ENSMUSG00000032478.15	Nme6	chr9	protein_coding	NME/NM23 nucleoside diphosphate kinase 6
chr9	109668778	109670995	+	109668778;109670583	109670544;109670995	ES	0.5	50	50	ENSMUST00000200005.5	ENSMUSG00000032478.15	Nme6	chr9	protein_coding	NME/NM23 nucleoside diphosphate kinase 6
chr9	109662363	109664338	+	109662363	109664386	A3SS	0.25	50	50	ENSMUST00000200005.5	ENSMUSG00000032478.15	Nme6	chr9	protein_coding	NME/NM23 nucleoside diphosphate kinase 6
chr9	109670583	109671030	+	109670583	109670995	A3SS	0.5	50	50	ENSMUST00000200005.5	ENSMUSG00000032478.15	Nme6	chr9	protein_coding	NME/NM23 nucleoside diphosphate kinase 6
chr9	109661875	109662264	+	109661956	109662264	A5SS	0.5	50	50	ENSMUST00000200005.5	ENSMUSG00000032478.15	Nme6	chr9	protein_coding	NME/NM23 nucleoside diphosphate kinase 6
chr9	109662363;109668778	109668676;109670544	+	109662363	109670544	cassetteExon	0.5	100	100	ENSMUST00000196797.5	ENSMUSG00000032478.15	Nme6	chr9	protein_coding	NME/NM23 nucleoside diphosphate kinase 6
chr9	109662363;109668778	109668676;109670995	+	109662363;109670583	109670544;109670995	MXE	0.5	100	100	ENSMUST00000196797.5	ENSMUSG00000032478.15	Nme6	chr9	protein_coding	NME/NM23 nucleoside diphosphate kinase 6
chr9	109662363;109668778	109668676;109671520	+	109662363;109671155	109670544;109671520	MXE	0.5	100	100	ENSMUST00000196797.5	ENSMUSG00000032478.15	Nme6	chr9	protein_coding	NME/NM23 nucleoside diphosphate kinase 6
chr9	109662363	109664338	+	109662363	109670544	A3SS	0.25	50	50	ENSMUST00000196797.5	ENSMUSG00000032478.15	Nme6	chr9	protein_coding	NME/NM23 nucleoside diphosphate kinase 6
chr9	109662363	109664386	+	109662363	109670544	A3SS	0.25	50	50	ENSMUST00000196797.5	ENSMUSG00000032478.15	Nme6	chr9	protein_coding	NME/NM23 nucleoside diphosphate kinase 6
chr9	109662363	109668676	+	109662363;109664482	109664338;109668676	ES	0.5	50	50	ENSMUST00000200345.5	ENSMUSG00000032478.15	Nme6	chr9	protein_coding	NME/NM23 nucleoside diphosphate kinase 6
chr9	109662363	109668676	+	109662363	109664386	3pMXE	0.25	50	50	ENSMUST00000196762.5	ENSMUSG00000032478.15	Nme6	chr9	protein_coding	NME/NM23 nucleoside diphosphate kinase 6
chr9	109668778	109671520	+	109668778;109671155	109670995;109671520	ES	0.5	50	50	ENSMUST00000199758.5	ENSMUSG00000032478.15	Nme6	chr9	protein_coding	NME/NM23 nucleoside diphosphate kinase 6
chr9	109662363;109670583	109670544;109670995	+	109662363;109668778	109664386;109670995	MXE	0.5	100	100	ENSMUST00000199758.5	ENSMUSG00000032478.15	Nme6	chr9	protein_coding	NME/NM23 nucleoside diphosphate kinase 6
chr9	109668778	109670995	+	109668778	109670544	A3SS&ES	0.33	50	50	ENSMUST00000197627.5	ENSMUSG00000032478.15	Nme6	chr9	protein_coding	NME/NM23 nucleoside diphosphate kinase 6
chr9	109662363	109670544	+	109662363	109668676	A3SS&ES	0.25	50	50	ENSMUST00000200660.5	ENSMUSG00000032478.15	Nme6	chr9	protein_coding	NME/NM23 nucleoside diphosphate kinase 6
chr9	109668778	109670544	+	109668778	109671520	A3SS	0.33	50	50	ENSMUST00000200660.5	ENSMUSG00000032478.15	Nme6	chr9	protein_coding	NME/NM23 nucleoside diphosphate kinase 6
chr9	109706302	109708299	+	109706302;109707378	109707336;109708299	ES	0.5	50	50	ENSMUST00000094324.8	ENSMUSG00000032477.15	Cdc25a	chr9	protein_coding	cell division cycle 25A
chr9	109718909	109721147	+	109718909;109720924	109720813;109721147	ES	0.5	50	50	ENSMUST00000094324.8	ENSMUSG00000032477.15	Cdc25a	chr9	protein_coding	cell division cycle 25A
chr9	109718909	109721147	+	109718909	109720813	A3SS	0.5	50	50	ENSMUST00000198308.5	ENSMUSG00000032477.15	Cdc25a	chr9	protein_coding	cell division cycle 25A
chr9	109718909	109721147	+	109720924	109721147	A5SS	0.5	50	50	ENSMUST00000199353.2	ENSMUSG00000032477.15	Cdc25a	chr9	protein_coding	cell division cycle 25A
chr9	109892191	109896553	+	109892191;109893517	109893296;109896553	ES	0.5	50	50	ENSMUST00000035055.15	ENSMUSG00000032479.16	Map4	chr9	protein_coding	microtubule-associated protein 4
chr9	109898053	109901681	+	109898053;109900207	109900094;109901681	ES	0.5	50	50	ENSMUST00000035055.15	ENSMUSG00000032479.16	Map4	chr9	protein_coding	microtubule-associated protein 4
chr9	109828908	109831814	+	109828908	109855169	A3SS	0.5	50	50	ENSMUST00000035055.15	ENSMUSG00000032479.16	Map4	chr9	protein_coding	microtubule-associated protein 4
chr9	109856860	109856967	+	109856860	109861167	A3SS	0.5	50	50	ENSMUST00000035055.15	ENSMUSG00000032479.16	Map4	chr9	protein_coding	microtubule-associated protein 4
chr9	109865923	109866356	+	109865923	109892085	A3SS	0.5	50	50	ENSMUST00000035055.15	ENSMUSG00000032479.16	Map4	chr9	protein_coding	microtubule-associated protein 4
chr9	109908961	109910909	+	109908961	109910489	A3SS&ES	0.5	50	50	ENSMUST00000035055.15	ENSMUSG00000032479.16	Map4	chr9	protein_coding	microtubule-associated protein 4
chr9	109910678	109910909	+	109910678	109910803	A3SS	0.5	50	50	ENSMUST00000035055.15	ENSMUSG00000032479.16	Map4	chr9	protein_coding	microtubule-associated protein 4
chr9	109798169	109807918	+	109761008	109807918	A5SS	0.5	50	50	ENSMUST00000035055.15	ENSMUSG00000032479.16	Map4	chr9	protein_coding	microtubule-associated protein 4
chr9	109869535	109892085	+	109865923	109892085	A5SS	0.33	50	50	ENSMUST00000035055.15	ENSMUSG00000032479.16	Map4	chr9	protein_coding	microtubule-associated protein 4
chr9	109882590	109892085	+	109865923	109892085	A5SS	0.33	50	50	ENSMUST00000035055.15	ENSMUSG00000032479.16	Map4	chr9	protein_coding	microtubule-associated protein 4
chr9	109898008	109900094	+	109898053	109900094	A5SS	0.5	50	50	ENSMUST00000035055.15	ENSMUSG00000032479.16	Map4	chr9	protein_coding	microtubule-associated protein 4
chr9	109908964	109910489	+	109908961	109910489	A5SS	0.5	50	50	ENSMUST00000035055.15	ENSMUSG00000032479.16	Map4	chr9	protein_coding	microtubule-associated protein 4
chr9	109908961	109910909	+	109908961;109910678	109910489;109910909	ES	0.33	50	50	ENSMUST00000165876.8	ENSMUSG00000032479.16	Map4	chr9	protein_coding	microtubule-associated protein 4
chr9	109908964	109910909	+	109910678	109910909	A5SS&ES	0.33	50	50	ENSMUST00000165876.8	ENSMUSG00000032479.16	Map4	chr9	protein_coding	microtubule-associated protein 4
chr9	109865923	109892085	+	109865923;109869535	109866356;109892085	ES	0.33	50	50	ENSMUST00000163190.8	ENSMUSG00000032479.16	Map4	chr9	protein_coding	microtubule-associated protein 4
chr9	109882590	109892085	+	109869535	109892085	A5SS	0.33	50	50	ENSMUST00000163190.8	ENSMUSG00000032479.16	Map4	chr9	protein_coding	microtubule-associated protein 4
chr9	109898053	109901681	+	109900207	109901681	A5SS&ES	0.5	50	50	ENSMUST00000163190.8	ENSMUSG00000032479.16	Map4	chr9	protein_coding	microtubule-associated protein 4
chr9	109898053	109907071	+	109898053;109901773	109901681;109907071	ES	0.5	50	50	ENSMUST00000164930.8	ENSMUSG00000032479.16	Map4	chr9	protein_coding	microtubule-associated protein 4
chr9	109898053	109900094	+	109898053	109907071	A3SS	0.33	50	50	ENSMUST00000199498.5	ENSMUSG00000032479.16	Map4	chr9	protein_coding	microtubule-associated protein 4
chr9	109908964	109910909	+	109908961	109910909	A5SS	0.33	50	50	ENSMUST00000199548.5	ENSMUSG00000032479.16	Map4	chr9	protein_coding	microtubule-associated protein 4
chr9	109908964	109910909	+	109908964;109910678	109910489;109910909	ES	0.33	50	50	ENSMUST00000199161.5	ENSMUSG00000032479.16	Map4	chr9	protein_coding	microtubule-associated protein 4
chr9	109908961	109910909	+	109910678	109910909	A5SS&ES	0.33	50	50	ENSMUST00000199161.5	ENSMUSG00000032479.16	Map4	chr9	protein_coding	microtubule-associated protein 4
chr9	109908964	109910909	+	109908964	109910489	A3SS&ES	0.5	50	50	ENSMUST00000200480.2	ENSMUSG00000032479.16	Map4	chr9	protein_coding	microtubule-associated protein 4
chr9	109913714	109914018	-	109913714;109913936	109913797;109914018	ES	0.5	50	50	ENSMUST00000062368.13	ENSMUSG00000032480.18	Dhx30	chr9	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 30
chr9	109922227	109927797	-	109922227;109926267	109926157;109927797	ES	0.5	50	50	ENSMUST00000062368.13	ENSMUSG00000032480.18	Dhx30	chr9	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 30
chr9	109927927	109937009	-	109927927	109929884	5pMXE	0.33	50	50	ENSMUST00000062368.13	ENSMUSG00000032480.18	Dhx30	chr9	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 30
chr9	109927927	109938094	-	109927927	109929884	5pMXE	0.33	50	50	ENSMUST00000062368.13	ENSMUSG00000032480.18	Dhx30	chr9	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 30
chr9	109927920	109929884	-	109927927	109929884	A3SS	0.5	50	50	ENSMUST00000062368.13	ENSMUSG00000032480.18	Dhx30	chr9	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 30
chr9	109913714	109913849	-	109913714	109913797	A5SS	0.33	50	50	ENSMUST00000062368.13	ENSMUSG00000032480.18	Dhx30	chr9	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 30
chr9	109942093	109944559	-	109942093;109944229	109944104;109944559	ES	0.33	50	50	ENSMUST00000198425.5	ENSMUSG00000032480.18	Dhx30	chr9	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 30
chr9	109944650	109946556	-	109944650	109946426	5pMXE	0.25	50	50	ENSMUST00000198425.5	ENSMUSG00000032480.18	Dhx30	chr9	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 30
chr9	109927927;109937037	109937009;109938094	-	109927927	109938094	cassetteExon	0.5	100	100	ENSMUST00000198425.5	ENSMUSG00000032480.18	Dhx30	chr9	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 30
chr9	109944650;109945823	109945746;109946426	-	109944650	109946426	cassetteExon	0.5	100	100	ENSMUST00000198425.5	ENSMUSG00000032480.18	Dhx30	chr9	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 30
chr9	109944650;109945860	109945746;109946426	-	109944650	109946426	cassetteExon	0.5	100	100	ENSMUST00000198425.5	ENSMUSG00000032480.18	Dhx30	chr9	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 30
chr9	109942158	109944104	-	109942093	109944104	A3SS	0.5	50	50	ENSMUST00000198425.5	ENSMUSG00000032480.18	Dhx30	chr9	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 30
chr9	109944279	109944559	-	109944229	109944559	A3SS	0.33	50	50	ENSMUST00000198425.5	ENSMUSG00000032480.18	Dhx30	chr9	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 30
chr9	109944650	109945907	-	109944650	109946426	A5SS	0.25	50	50	ENSMUST00000198425.5	ENSMUSG00000032480.18	Dhx30	chr9	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 30
chr9	109942093	109944559	-	109944229	109944559	A3SS&ES	0.33	50	50	ENSMUST00000197928.5	ENSMUSG00000032480.18	Dhx30	chr9	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 30
chr9	109913714;109913936	109913849;109914018	-	109913714	109914018	cassetteExon	0.5	100	100	ENSMUST00000199332.5	ENSMUSG00000032480.18	Dhx30	chr9	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 30
chr9	109942093	109944559	-	109942093	109944104	5pMXE	0.5	50	50	ENSMUST00000165596.8	ENSMUSG00000032480.18	Dhx30	chr9	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 30
chr9	109942093;109944279	109944104;109944559	-	109942093	109944559	cassetteExon	0.5	100	100	ENSMUST00000196171.5	ENSMUSG00000032480.18	Dhx30	chr9	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 30
chr9	109944650	109946426	-	109944650	109945746	5pMXE	0.25	50	50	ENSMUST00000200066.5	ENSMUSG00000032480.18	Dhx30	chr9	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 30
chr9	109944650	109946556	-	109944650	109945746	5pMXE	0.25	50	50	ENSMUST00000200066.5	ENSMUSG00000032480.18	Dhx30	chr9	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 30
chr9	109944650	109945907	-	109944650	109945746	A5SS	0.25	50	50	ENSMUST00000200066.5	ENSMUSG00000032480.18	Dhx30	chr9	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 30
chr9	109913714	109914018	-	109913714	109913797	A5SS	0.33	50	50	ENSMUST00000200593.2	ENSMUSG00000032480.18	Dhx30	chr9	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 30
chr9	109944650	109946556	-	109944650	109945907	5pMXE	0.25	50	50	ENSMUST00000200476.5	ENSMUSG00000032480.18	Dhx30	chr9	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 30
chr9	109942093	109944559	-	109944279	109944559	A3SS&ES	0.33	50	50	ENSMUST00000197182.5	ENSMUSG00000032480.18	Dhx30	chr9	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 30
chr9	109945823	109946426	-	109945860	109946426	A3SS	0.33	50	50	ENSMUST00000197785.5	ENSMUSG00000032480.18	Dhx30	chr9	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 30
chr9	109961376	109964637	+	109946919	109964637	A5SS	0.5	50	50	ENSMUST00000098355.6	ENSMUSG00000032481.18	Smarcc1	chr9	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
chr9	110064121;110065896	110065784;110066887	+	110064121	110066887	cassetteExon	0.5	100	100	ENSMUST00000088716.12	ENSMUSG00000032481.18	Smarcc1	chr9	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
chr9	110064121	110066203	+	110064121	110066887	A3SS	0.33	50	50	ENSMUST00000088716.12	ENSMUSG00000032481.18	Smarcc1	chr9	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
chr9	110064121	110066203	+	110064121	110065784	A3SS&ES	0.33	50	50	ENSMUST00000199896.2	ENSMUSG00000032481.18	Smarcc1	chr9	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
chr9	110085288	110091128	+	110085369	110091128	A5SS	0.5	50	50	ENSMUST00000035058.10	ENSMUSG00000032482.10	Cspg5	chr9	protein_coding	chondroitin sulfate proteoglycan 5
chr9	110134417;110138270	110138104;110139163	+	110134417	110139163	cassetteExon	0.5	100	100	ENSMUST00000199592.5	ENSMUSG00000054836.13	Elp6	chr9	protein_coding	elongator acetyltransferase complex subunit 6
chr9	110143162	110144865	+	110143162	110144819	A3SS	0.5	50	50	ENSMUST00000199592.5	ENSMUSG00000054836.13	Elp6	chr9	protein_coding	elongator acetyltransferase complex subunit 6
chr9	110134737	110139163	+	110134417	110139163	A5SS	0.33	50	50	ENSMUST00000199592.5	ENSMUSG00000054836.13	Elp6	chr9	protein_coding	elongator acetyltransferase complex subunit 6
chr9	110134737	110139163	+	110138270	110139163	A5SS&ES	0.33	50	50	ENSMUST00000068071.12	ENSMUSG00000054836.13	Elp6	chr9	protein_coding	elongator acetyltransferase complex subunit 6
chr9	110201422	110202044	+	110201422	110202100	A3SS	0.5	50	50	ENSMUST00000198976.5	ENSMUSG00000032485.15	Scap	chr9	protein_coding	SREBF chaperone
chr9	110162573	110182014	+	110162417	110182014	A5SS	0.2	50	50	ENSMUST00000198976.5	ENSMUSG00000032485.15	Scap	chr9	protein_coding	SREBF chaperone
chr9	110162830	110182014	+	110162417	110182014	A5SS	0.2	50	50	ENSMUST00000198976.5	ENSMUSG00000032485.15	Scap	chr9	protein_coding	SREBF chaperone
chr9	110162834	110182014	+	110162417	110182014	A5SS	0.2	50	50	ENSMUST00000198976.5	ENSMUSG00000032485.15	Scap	chr9	protein_coding	SREBF chaperone
chr9	110173409	110182014	+	110162417	110182014	A5SS	0.2	50	50	ENSMUST00000198976.5	ENSMUSG00000032485.15	Scap	chr9	protein_coding	SREBF chaperone
chr9	110190821	110191462	+	110182232	110191462	A5SS	0.5	50	50	ENSMUST00000198976.5	ENSMUSG00000032485.15	Scap	chr9	protein_coding	SREBF chaperone
chr9	110162830	110182014	+	110162573	110182014	A5SS	0.2	50	50	ENSMUST00000098350.10	ENSMUSG00000032485.15	Scap	chr9	protein_coding	SREBF chaperone
chr9	110162834	110182014	+	110162573	110182014	A5SS	0.2	50	50	ENSMUST00000098350.10	ENSMUSG00000032485.15	Scap	chr9	protein_coding	SREBF chaperone
chr9	110173409	110182014	+	110162573	110182014	A5SS	0.2	50	50	ENSMUST00000098350.10	ENSMUSG00000032485.15	Scap	chr9	protein_coding	SREBF chaperone
chr9	110162834	110182014	+	110162830	110182014	A5SS	0.2	50	50	ENSMUST00000198761.5	ENSMUSG00000032485.15	Scap	chr9	protein_coding	SREBF chaperone
chr9	110173409	110182014	+	110162830	110182014	A5SS	0.2	50	50	ENSMUST00000198761.5	ENSMUSG00000032485.15	Scap	chr9	protein_coding	SREBF chaperone
chr9	110173409	110182014	+	110162834	110182014	A5SS	0.2	50	50	ENSMUST00000197630.3	ENSMUSG00000032485.15	Scap	chr9	protein_coding	SREBF chaperone
chr9	110268126	110279788	-	110268126;110275940	110275742;110279788	ES	0.5	50	50	ENSMUST00000068025.13	ENSMUSG00000054792.16	Klhl18	chr9	protein_coding	kelch-like 18
chr9	110275940	110284425	-	110275940;110279928	110279788;110284425	ES	0.5	50	50	ENSMUST00000068025.13	ENSMUSG00000054792.16	Klhl18	chr9	protein_coding	kelch-like 18
chr9	110265316	110266415	-	110265301	110266415	A3SS	0.5	50	50	ENSMUST00000068025.13	ENSMUSG00000054792.16	Klhl18	chr9	protein_coding	kelch-like 18
chr9	110284555	110291210	-	110284555	110305534	A5SS	0.5	50	50	ENSMUST00000068025.13	ENSMUSG00000054792.16	Klhl18	chr9	protein_coding	kelch-like 18
chr9	110268126;110275940	110275742;110284425	-	110268126;110279928	110279788;110284425	MXE	0.5	100	100	ENSMUST00000197336.5	ENSMUSG00000054792.16	Klhl18	chr9	protein_coding	kelch-like 18
chr9	110268126	110279788	-	110268126	110275742	5pMXE	0.5	50	50	ENSMUST00000198327.2	ENSMUSG00000054792.16	Klhl18	chr9	protein_coding	kelch-like 18
chr9	110306151;110312226	110312129;110314103	+	110306151	110314103	cassetteExon	0.5	100	100	ENSMUST00000198858.5	ENSMUSG00000032489.18	Kif9	chr9	protein_coding	kinesin family member 9
chr9	110306182	110312129	+	110306151	110312129	A5SS	0.33	50	50	ENSMUST00000197248.5	ENSMUSG00000032489.18	Kif9	chr9	protein_coding	kinesin family member 9
chr9	110307309	110312129	+	110306151	110312129	A5SS	0.33	50	50	ENSMUST00000197248.5	ENSMUSG00000032489.18	Kif9	chr9	protein_coding	kinesin family member 9
chr9	110350432	110353952	+	110350432	110352795	3pMXE	0.5	50	50	ENSMUST00000061155.12	ENSMUSG00000032489.18	Kif9	chr9	protein_coding	kinesin family member 9
chr9	110306182;110307309	110307067;110312129	+	110306182	110312129	cassetteExon	0.5	100	100	ENSMUST00000061155.12	ENSMUSG00000032489.18	Kif9	chr9	protein_coding	kinesin family member 9
chr9	110306151	110314103	+	110312226	110314103	A5SS&ES	0.5	50	50	ENSMUST00000061155.12	ENSMUSG00000032489.18	Kif9	chr9	protein_coding	kinesin family member 9
chr9	110343691	110346573	+	110343691	110353952	A3SS	0.5	50	50	ENSMUST00000198043.5	ENSMUSG00000032489.18	Kif9	chr9	protein_coding	kinesin family member 9
chr9	110350432	110353952	+	110343691	110353952	A5SS	0.5	50	50	ENSMUST00000198043.5	ENSMUSG00000032489.18	Kif9	chr9	protein_coding	kinesin family member 9
chr9	110385484	110392005	+	110385484;110390307	110390184;110392005	ES	0.33	50	50	ENSMUST00000153838.8	ENSMUSG00000044791.17	Setd2	chr9	protein_coding	SET domain containing 2
chr9	110403342;110406357	110406190;110419456	+	110403342	110419456	cassetteExon	0.5	100	100	ENSMUST00000153838.8	ENSMUSG00000044791.17	Setd2	chr9	protein_coding	SET domain containing 2
chr9	110403342;110406406	110406190;110419456	+	110403342	110419456	cassetteExon	0.5	100	100	ENSMUST00000153838.8	ENSMUSG00000044791.17	Setd2	chr9	protein_coding	SET domain containing 2
chr9	110433299;110439117	110439066;110443938	+	110433299	110443938	cassetteExon	0.5	100	100	ENSMUST00000153838.8	ENSMUSG00000044791.17	Setd2	chr9	protein_coding	SET domain containing 2
chr9	110419504	110421470	+	110419504	110421467	A3SS	0.5	50	50	ENSMUST00000153838.8	ENSMUSG00000044791.17	Setd2	chr9	protein_coding	SET domain containing 2
chr9	110390316	110392005	+	110390307	110392005	A5SS	0.33	50	50	ENSMUST00000153838.8	ENSMUSG00000044791.17	Setd2	chr9	protein_coding	SET domain containing 2
chr9	110385484;110390316	110390184;110392005	+	110385484	110392005	cassetteExon	0.5	100	100	ENSMUST00000196814.5	ENSMUSG00000044791.17	Setd2	chr9	protein_coding	SET domain containing 2
chr9	110406406	110419456	+	110406357	110419456	A5SS	0.33	50	50	ENSMUST00000196814.5	ENSMUSG00000044791.17	Setd2	chr9	protein_coding	SET domain containing 2
chr9	110385484	110392005	+	110390307	110392005	5pMXE	0.33	50	50	ENSMUST00000195911.5	ENSMUSG00000044791.17	Setd2	chr9	protein_coding	SET domain containing 2
chr9	110451182	110452155	-	110451329	110452155	A3SS	0.5	50	50	ENSMUST00000035069.14	ENSMUSG00000032491.15	Nradd	chr9	protein_coding	neurotrophin receptor associated death domain
chr9	110456255	110456875	-	110456255;110456426	110456337;110456875	ES	0.5	50	50	ENSMUST00000133191.8	ENSMUSG00000056724.16	Nbeal2	chr9	protein_coding	neurobeachin-like 2
chr9	110463940	110464366	-	110463940;110464272	110464114;110464366	ES	0.5	50	50	ENSMUST00000133191.8	ENSMUSG00000056724.16	Nbeal2	chr9	protein_coding	neurobeachin-like 2
chr9	110468931	110470839	-	110468931;110470559	110470479;110470839	ES	0.5	50	50	ENSMUST00000133191.8	ENSMUSG00000056724.16	Nbeal2	chr9	protein_coding	neurobeachin-like 2
chr9	110462958	110463781	-	110463517	110463781	A3SS&ES	0.33	50	50	ENSMUST00000133191.8	ENSMUSG00000056724.16	Nbeal2	chr9	protein_coding	neurobeachin-like 2
chr9	110463538	110463781	-	110463517	110463781	A3SS	0.33	50	50	ENSMUST00000133191.8	ENSMUSG00000056724.16	Nbeal2	chr9	protein_coding	neurobeachin-like 2
chr9	110473786	110474318	-	110473786	110482965	A5SS	0.5	50	50	ENSMUST00000133191.8	ENSMUSG00000056724.16	Nbeal2	chr9	protein_coding	neurobeachin-like 2
chr9	110462958	110463781	-	110463538	110463781	A3SS&ES	0.33	50	50	ENSMUST00000167320.8	ENSMUSG00000056724.16	Nbeal2	chr9	protein_coding	neurobeachin-like 2
chr9	110463940	110464366	-	110463940	110464114	5pMXE	0.5	50	50	ENSMUST00000153960.2	ENSMUSG00000056724.16	Nbeal2	chr9	protein_coding	neurobeachin-like 2
chr9	110485726;110529811	110529741;110537514	+	110485726;110521451	110521384;110537514	MXE	0.5	100	100	ENSMUST00000019803.9	ENSMUSG00000019659.9	Ccdc12	chr9	protein_coding	coiled-coil domain containing 12
chr9	110521451;110529811	110529741;110537514	+	110521451	110537514	cassetteExon	0.5	100	100	ENSMUST00000019803.9	ENSMUSG00000019659.9	Ccdc12	chr9	protein_coding	coiled-coil domain containing 12
chr9	110496139	110521384	+	110485726	110521384	A5SS	0.5	50	50	ENSMUST00000019803.9	ENSMUSG00000019659.9	Ccdc12	chr9	protein_coding	coiled-coil domain containing 12
chr9	110485726	110529741	+	110485726;110521451	110521384;110529741	ES	0.5	50	50	ENSMUST00000196092.5	ENSMUSG00000019659.9	Ccdc12	chr9	protein_coding	coiled-coil domain containing 12
chr9	110521451	110537514	+	110521451	110529741	3pMXE	0.5	50	50	ENSMUST00000196092.5	ENSMUSG00000019659.9	Ccdc12	chr9	protein_coding	coiled-coil domain containing 12
chr9	110560708	110573799	-	110560708;110571413	110571294;110573799	ES	0.5	50	50	ENSMUST00000198865.5	ENSMUSG00000032492.15	Pth1r	chr9	protein_coding	parathyroid hormone 1 receptor
chr9	110560708;110571101	110571007;110571294	-	110560708	110571294	cassetteExon	0.5	100	100	ENSMUST00000198865.5	ENSMUSG00000032492.15	Pth1r	chr9	protein_coding	parathyroid hormone 1 receptor
chr9	110571413	110572523	-	110571413	110573799	A5SS	0.5	50	50	ENSMUST00000198865.5	ENSMUSG00000032492.15	Pth1r	chr9	protein_coding	parathyroid hormone 1 receptor
chr9	110560708	110573799	-	110560708	110571294	5pMXE	0.33	50	50	ENSMUST00000006005.12	ENSMUSG00000032492.15	Pth1r	chr9	protein_coding	parathyroid hormone 1 receptor
chr9	110560708;110571413	110571007;110573799	-	110560708	110573799	cassetteExon	0.5	100	100	ENSMUST00000199862.5	ENSMUSG00000032492.15	Pth1r	chr9	protein_coding	parathyroid hormone 1 receptor
chr9	110594999	110595547	+	110592968	110595547	A5SS	0.33	50	50	ENSMUST00000200011.5	ENSMUSG00000059741.14	Myl3	chr9	protein_coding	myosin, light polypeptide 3
chr9	110595282	110595547	+	110592968	110595547	A5SS	0.33	50	50	ENSMUST00000200011.5	ENSMUSG00000059741.14	Myl3	chr9	protein_coding	myosin, light polypeptide 3
chr9	110595282	110595547	+	110594999	110595547	A5SS	0.33	50	50	ENSMUST00000124267.8	ENSMUSG00000059741.14	Myl3	chr9	protein_coding	myosin, light polypeptide 3
chr9	110643791	110644361	+	110643824	110644361	A5SS	0.5	50	50	ENSMUST00000098345.3	ENSMUSG00000032493.9	Prss44	chr9	protein_coding	protease, serine 44
chr9	110663807	110667489	+	110663807;110665160	110665134;110667489	ES	0.5	50	50	ENSMUST00000011391.12	ENSMUSG00000047257.14	Prss45	chr9	protein_coding	protease, serine 45
chr9	110691613	110693349	+	110691613;110692964	110692798;110693349	ES	0.5	50	50	ENSMUST00000051097.6	ENSMUSG00000048752.8	Prss50	chr9	protein_coding	protease, serine 50
chr9	110704605	110704696	-	110703094	110704696	A3SS	0.5	50	50	ENSMUST00000050958.9	ENSMUSG00000049555.11	Tmie	chr9	protein_coding	transmembrane inner ear
chr9	110709297	110711782	+	110709297;110709525	110709410;110711782	ES	0.5	50	50	ENSMUST00000143416.2	ENSMUSG00000044037.16	Als2cl	chr9	protein_coding	ALS2 C-terminal like
chr9	110723228	110723634	+	110723228;110723460	110723364;110723634	ES	0.5	50	50	ENSMUST00000084926.9	ENSMUSG00000044037.16	Als2cl	chr9	protein_coding	ALS2 C-terminal like
chr9	110711891	110713083	+	110711891	110713086	A3SS	0.5	50	50	ENSMUST00000084926.9	ENSMUSG00000044037.16	Als2cl	chr9	protein_coding	ALS2 C-terminal like
chr9	110717176	110717548	+	110716479	110717548	A5SS	0.5	50	50	ENSMUST00000084926.9	ENSMUSG00000044037.16	Als2cl	chr9	protein_coding	ALS2 C-terminal like
chr9	110709297	110711782	+	110709525	110711782	5pMXE	0.5	50	50	ENSMUST00000123389.8	ENSMUSG00000044037.16	Als2cl	chr9	protein_coding	ALS2 C-terminal like
chr9	110771712	110773259	-	110771712;110772321	110772220;110773259	ES	0.5	50	50	ENSMUST00000035075.13	ENSMUSG00000032494.13	Tdgf1	chr9	protein_coding	teratocarcinoma-derived growth factor 1
chr9	110771712;110771897	110771836;110772220	-	110771712	110772220	cassetteExon	0.5	100	100	ENSMUST00000035075.13	ENSMUSG00000032494.13	Tdgf1	chr9	protein_coding	teratocarcinoma-derived growth factor 1
chr9	110771712;110772321	110771836;110773259	-	110771712	110773259	cassetteExon	0.5	100	100	ENSMUST00000199782.2	ENSMUSG00000032494.13	Tdgf1	chr9	protein_coding	teratocarcinoma-derived growth factor 1
chr9	110790077	110795509	+	110790077;110791739	110791583;110795509	ES	0.5	50	50	ENSMUST00000035076.9	ENSMUSG00000032495.9	Lrrc2	chr9	protein_coding	leucine rich repeat containing 2
chr9	110782956	110786868	+	110780744	110786868	A5SS	0.5	50	50	ENSMUST00000035076.9	ENSMUSG00000032495.9	Lrrc2	chr9	protein_coding	leucine rich repeat containing 2
chr9	110787024	110791583	+	110790077	110791583	A5SS&ES	0.5	50	50	ENSMUST00000035076.9	ENSMUSG00000032495.9	Lrrc2	chr9	protein_coding	leucine rich repeat containing 2
chr9	110790077	110795509	+	110791739	110795509	A5SS&ES	0.5	50	50	ENSMUST00000196834.2	ENSMUSG00000032495.9	Lrrc2	chr9	protein_coding	leucine rich repeat containing 2
chr9	110829473	110833821	+	110822016	110833821	A5SS	0.5	50	50	ENSMUST00000197321.5	ENSMUSG00000057802.9	Gm10030	chr9	lncRNA	predicted gene 10030
chr9	110848436	110849915	+	110848436;110848558	110848522;110849915	ES	0.5	50	50	ENSMUST00000198884.5	ENSMUSG00000032496.8	Ltf	chr9	protein_coding	lactotransferrin
chr9	110850075	110851046	+	110850075	110850994	A3SS	0.5	50	50	ENSMUST00000198884.5	ENSMUSG00000032496.8	Ltf	chr9	protein_coding	lactotransferrin
chr9	110849940	110869396	+	110851393	110869396	A5SS&ES	0.33	50	50	ENSMUST00000198884.5	ENSMUSG00000032496.8	Ltf	chr9	protein_coding	lactotransferrin
chr9	110868058	110869396	+	110851393	110869396	A5SS	0.33	50	50	ENSMUST00000198884.5	ENSMUSG00000032496.8	Ltf	chr9	protein_coding	lactotransferrin
chr9	110868058	110869396	+	110849940	110869396	A5SS	0.33	50	50	ENSMUST00000196209.5	ENSMUSG00000032496.8	Ltf	chr9	protein_coding	lactotransferrin
chr9	110852680	110854066	+	110852680;110853630	110853452;110854066	ES	0.5	50	50	ENSMUST00000035077.8	ENSMUSG00000032496.8	Ltf	chr9	protein_coding	lactotransferrin
chr9	110860226	110867874	+	110860226;110864882	110864815;110867874	ES	0.5	50	50	ENSMUST00000035077.8	ENSMUSG00000032496.8	Ltf	chr9	protein_coding	lactotransferrin
chr9	110851531	110853457	+	110851531	110851902	A3SS&ES	0.5	50	50	ENSMUST00000035077.8	ENSMUSG00000032496.8	Ltf	chr9	protein_coding	lactotransferrin
chr9	110857560	110860165	+	110857560	110858602	A3SS&ES	0.5	50	50	ENSMUST00000035077.8	ENSMUSG00000032496.8	Ltf	chr9	protein_coding	lactotransferrin
chr9	110869541	110871216	+	110869585	110871216	A5SS	0.5	50	50	ENSMUST00000035077.8	ENSMUSG00000032496.8	Ltf	chr9	protein_coding	lactotransferrin
chr9	110851531;110853630	110853457;110854066	+	110851531;110852680	110851902;110854066	MXE	0.5	100	100	ENSMUST00000196122.3	ENSMUSG00000032496.8	Ltf	chr9	protein_coding	lactotransferrin
chr9	110852680	110854066	+	110853630	110854066	A5SS&ES	0.5	50	50	ENSMUST00000198152.2	ENSMUSG00000032496.8	Ltf	chr9	protein_coding	lactotransferrin
chr9	110860226	110867874	+	110860226	110864815	3pMXE	0.5	50	50	ENSMUST00000199313.2	ENSMUSG00000032496.8	Ltf	chr9	protein_coding	lactotransferrin
chr9	110860226	110867874	+	110864882	110867874	5pMXE	0.5	50	50	ENSMUST00000198233.2	ENSMUSG00000032496.8	Ltf	chr9	protein_coding	lactotransferrin
chr9	110885950	110886273	-	110885950	110886449	A5SS	0.5	50	50	ENSMUST00000199839.5	ENSMUSG00000043953.13	Ccrl2	chr9	protein_coding	chemokine (C-C motif) receptor-like 2
chr9	111019352	111028733	+	111019352;111022186	111022115;111028733	ES	0.5	50	50	ENSMUST00000200094.5	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	110990457;110996312	110996268;111017830	+	110990457	111017830	cassetteExon	0.5	100	100	ENSMUST00000200094.5	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	110990457;111002190	111002149;111017830	+	110990457	111017830	cassetteExon	0.5	100	100	ENSMUST00000200094.5	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	110990457	110991916	+	110990457	111017830	A3SS	0.16	50	50	ENSMUST00000200094.5	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	110990457	110999324	+	110990457	111017830	A3SS	0.16	50	50	ENSMUST00000200094.5	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	110990457	111009284	+	110990457	111017830	A3SS	0.16	50	50	ENSMUST00000200094.5	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111019352	111028823	+	111019352	111022115	A3SS&ES	0.33	50	50	ENSMUST00000200094.5	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	110947457	110948708	+	110946861	110948708	A5SS	0.33	50	50	ENSMUST00000200094.5	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	110947730	110948708	+	110946861	110948708	A5SS	0.33	50	50	ENSMUST00000200094.5	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111003490	111017830	+	110990457	111017830	A5SS	0.11	50	50	ENSMUST00000200094.5	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111004910	111017830	+	110990457	111017830	A5SS	0.11	50	50	ENSMUST00000200094.5	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111011955	111017830	+	110990457	111017830	A5SS	0.11	50	50	ENSMUST00000200094.5	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111011964	111017830	+	110990457	111017830	A5SS	0.11	50	50	ENSMUST00000200094.5	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111013347	111017830	+	110990457	111017830	A5SS	0.11	50	50	ENSMUST00000200094.5	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111014379	111017830	+	110990457	111017830	A5SS	0.11	50	50	ENSMUST00000200094.5	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	110990457;111002190	111002149;111017830	+	110990457;110996312	110996268;111017830	MXE	0.5	100	100	ENSMUST00000035078.13	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	110996312;111002190	111002149;111017830	+	110996312	111017830	cassetteExon	0.5	100	100	ENSMUST00000035078.13	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111045046;111045235	111045155;111048750	+	111045046	111048750	cassetteExon	0.5	100	100	ENSMUST00000035078.13	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	110990457	110991916	+	110990457	110996268	A3SS	0.16	50	50	ENSMUST00000035078.13	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	110990457	110999324	+	110990457	110996268	A3SS&ES	0.16	50	50	ENSMUST00000035078.13	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	110990457	111009284	+	110990457	110996268	A3SS&ES	0.16	50	50	ENSMUST00000035078.13	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111019352	111028823	+	111019352	111028733	A3SS	0.33	50	50	ENSMUST00000035078.13	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111034915	111036865	+	111034915	111043209	A3SS	0.5	50	50	ENSMUST00000035078.13	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	110947730	110948708	+	110947457	110948708	A5SS	0.33	50	50	ENSMUST00000035078.13	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	110996173	110996268	+	110990457	110996268	A5SS	0.5	50	50	ENSMUST00000035078.13	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111003490	111017830	+	110996312	111017830	A5SS	0.11	50	50	ENSMUST00000035078.13	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111004910	111017830	+	110996312	111017830	A5SS	0.11	50	50	ENSMUST00000035078.13	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111011955	111017830	+	110996312	111017830	A5SS	0.11	50	50	ENSMUST00000035078.13	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111011964	111017830	+	110996312	111017830	A5SS	0.11	50	50	ENSMUST00000035078.13	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111013347	111017830	+	110996312	111017830	A5SS	0.11	50	50	ENSMUST00000035078.13	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111014379	111017830	+	110996312	111017830	A5SS	0.11	50	50	ENSMUST00000035078.13	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111042982	111043209	+	111034915	111043209	A5SS	0.5	50	50	ENSMUST00000035078.13	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	110990457	111002149	+	110990457;110999392	110999324;111002149	ES	0.33	50	50	ENSMUST00000197256.5	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	110990457;110996312	110996268;111002149	+	110990457;110999392	110999324;111002149	MXE	0.5	100	100	ENSMUST00000197256.5	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	110990457;110996312	110996268;111017830	+	110990457;111002190	110999324;111017830	MXE	0.5	100	100	ENSMUST00000197256.5	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111002190;111004910	111004845;111017830	+	111002190	111017830	cassetteExon	0.5	100	100	ENSMUST00000197256.5	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	110990457	110991916	+	110990457	110999324	A3SS	0.16	50	50	ENSMUST00000197256.5	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	110990457	111009284	+	110990457	110999324	A3SS&ES	0.16	50	50	ENSMUST00000197256.5	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111003490	111017830	+	111002190	111017830	A5SS	0.11	50	50	ENSMUST00000197256.5	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111011955	111017830	+	111002190	111017830	A5SS	0.11	50	50	ENSMUST00000197256.5	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111011964	111017830	+	111002190	111017830	A5SS	0.11	50	50	ENSMUST00000197256.5	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111013347	111017830	+	111002190	111017830	A5SS	0.11	50	50	ENSMUST00000197256.5	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111014379	111017830	+	111002190	111017830	A5SS	0.11	50	50	ENSMUST00000197256.5	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111011955	111017830	+	111011955;111013347	111013258;111017830	ES	0.11	50	50	ENSMUST00000217341.3	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	110990457;110996312	110996268;111002149	+	110990457	111002149	cassetteExon	0.5	100	100	ENSMUST00000217341.3	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	110990457;110996312	110996268;111017830	+	110990457;111013347	111002149;111017830	MXE	0.5	100	100	ENSMUST00000217341.3	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	110990457	110991916	+	110990457	111002149	A3SS	0.16	50	50	ENSMUST00000217341.3	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111003490	111004845	+	111002190	111004845	A5SS	0.5	50	50	ENSMUST00000217341.3	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111003490	111017830	+	111013347	111017830	A5SS&ES	0.11	50	50	ENSMUST00000217341.3	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111011500	111011887	+	111009340	111011887	A5SS	0.5	50	50	ENSMUST00000217341.3	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111011964	111017830	+	111013347	111017830	A5SS&ES	0.11	50	50	ENSMUST00000217341.3	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111014379	111017830	+	111013347	111017830	A5SS	0.11	50	50	ENSMUST00000217341.3	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	110990457;110999392	110999324;111002149	+	110990457;110996312	110991916;111002149	MXE	0.5	100	100	ENSMUST00000239186.2	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111019352	111028733	+	111019352	111022115	3pMXE	0.33	50	50	ENSMUST00000196703.6	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	110990457;110996312	110996268;111017830	+	110990457;111011955	111009284;111017830	MXE	0.5	100	100	ENSMUST00000196703.6	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	110990457;111002190	111002149;111017830	+	110990457;111011955	111009284;111017830	MXE	0.5	100	100	ENSMUST00000196703.6	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	110990457	110991916	+	110990457	111009284	A3SS	0.16	50	50	ENSMUST00000196703.6	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111003490	111017830	+	111011955	111017830	A5SS&ES	0.11	50	50	ENSMUST00000196703.6	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111004910	111017830	+	111011955	111017830	A5SS&ES	0.11	50	50	ENSMUST00000196703.6	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111008988	111009284	+	110990457	111009284	A5SS	0.5	50	50	ENSMUST00000196703.6	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111011964	111017830	+	111011955	111017830	A5SS	0.11	50	50	ENSMUST00000196703.6	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111014379	111017830	+	111011955	111017830	A5SS	0.11	50	50	ENSMUST00000196703.6	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111003490	111017830	+	111003490;111004910	111004845;111017830	ES	0.16	50	50	ENSMUST00000239333.2	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111004910	111006310	+	111004910	111017830	A3SS	0.5	50	50	ENSMUST00000239333.2	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111011964	111017830	+	111004910	111017830	A5SS	0.16	50	50	ENSMUST00000239333.2	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111013347	111017830	+	111004910	111017830	A5SS	0.16	50	50	ENSMUST00000239333.2	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111014379	111017830	+	111004910	111017830	A5SS	0.16	50	50	ENSMUST00000239333.2	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111011964	111017830	+	111003490	111017830	A5SS	0.11	50	50	ENSMUST00000239196.2	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111014379	111017830	+	111003490	111017830	A5SS	0.11	50	50	ENSMUST00000239196.2	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111014379	111017830	+	111011964	111017830	A5SS	0.25	50	50	ENSMUST00000216430.2	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111019352	111028733	+	111022186	111028733	5pMXE	0.5	50	50	ENSMUST00000197540.5	ENSMUSG00000032497.20	Lrrfip2	chr9	protein_coding	leucine rich repeat (in FLII) interacting protein 2
chr9	111078381;111082044	111081932;111084696	-	111078381	111084696	cassetteExon	0.5	100	100	ENSMUST00000135218.8	ENSMUSG00000032498.10	Mlh1	chr9	protein_coding	mutL homolog 1
chr9	111078381;111082044	111081932;111086468	-	111078381;111085203	111084696;111086468	MXE	0.5	100	100	ENSMUST00000135218.8	ENSMUSG00000032498.10	Mlh1	chr9	protein_coding	mutL homolog 1
chr9	111085203;111086081	111085951;111086468	-	111085203	111086468	cassetteExon	0.5	100	100	ENSMUST00000135218.8	ENSMUSG00000032498.10	Mlh1	chr9	protein_coding	mutL homolog 1
chr9	111085203;111086336	111085951;111086468	-	111085203	111086468	cassetteExon	0.5	100	100	ENSMUST00000135218.8	ENSMUSG00000032498.10	Mlh1	chr9	protein_coding	mutL homolog 1
chr9	111059365	111059969	-	111059403	111059969	A3SS	0.5	50	50	ENSMUST00000135218.8	ENSMUSG00000032498.10	Mlh1	chr9	protein_coding	mutL homolog 1
chr9	111097376	111100477	-	111097371	111100477	A3SS	0.5	50	50	ENSMUST00000135218.8	ENSMUSG00000032498.10	Mlh1	chr9	protein_coding	mutL homolog 1
chr9	111076471	111078288	-	111076471	111076944	A5SS	0.5	50	50	ENSMUST00000135218.8	ENSMUSG00000032498.10	Mlh1	chr9	protein_coding	mutL homolog 1
chr9	111085203	111086468	-	111082044	111086468	A3SS	0.25	50	50	ENSMUST00000199404.2	ENSMUSG00000032498.10	Mlh1	chr9	protein_coding	mutL homolog 1
chr9	111086081	111086468	-	111082044	111086468	A3SS	0.25	50	50	ENSMUST00000199404.2	ENSMUSG00000032498.10	Mlh1	chr9	protein_coding	mutL homolog 1
chr9	111086336	111086468	-	111082044	111086468	A3SS	0.25	50	50	ENSMUST00000199404.2	ENSMUSG00000032498.10	Mlh1	chr9	protein_coding	mutL homolog 1
chr9	111078381	111084696	-	111078381	111081932	A5SS&ES	0.5	50	50	ENSMUST00000199404.2	ENSMUSG00000032498.10	Mlh1	chr9	protein_coding	mutL homolog 1
chr9	111082044	111084696	-	111082044	111086468	A5SS	0.5	50	50	ENSMUST00000199404.2	ENSMUSG00000032498.10	Mlh1	chr9	protein_coding	mutL homolog 1
chr9	111086336	111086468	-	111086081	111086468	A3SS	0.25	50	50	ENSMUST00000135695.2	ENSMUSG00000032498.10	Mlh1	chr9	protein_coding	mutL homolog 1
chr9	111085203	111086468	-	111086336	111086468	3pMXE	0.25	50	50	ENSMUST00000134316.2	ENSMUSG00000032498.10	Mlh1	chr9	protein_coding	mutL homolog 1
chr9	111103595	111106458	+	111103595	111106512	A3SS	0.5	50	50	ENSMUST00000135807.2	ENSMUSG00000046785.9	Epm2aip1	chr9	protein_coding	EPM2A (laforin) interacting protein 1
chr9	111172313;111173924	111173898;111174463	+	111172313	111174463	cassetteExon	0.5	100	100	ENSMUST00000078626.8	ENSMUSG00000062296.9	Trank1	chr9	protein_coding	tetratricopeptide repeat and ankyrin repeat containing 1
chr9	111212230;111214272	111214089;111215439	+	111212230	111215439	cassetteExon	0.5	100	100	ENSMUST00000078626.8	ENSMUSG00000062296.9	Trank1	chr9	protein_coding	tetratricopeptide repeat and ankyrin repeat containing 1
chr9	111212230;111214272	111214187;111215439	+	111212230	111215439	cassetteExon	0.5	100	100	ENSMUST00000078626.8	ENSMUSG00000062296.9	Trank1	chr9	protein_coding	tetratricopeptide repeat and ankyrin repeat containing 1
chr9	111174581	111176534	+	111174581	111176537	A3SS	0.5	50	50	ENSMUST00000078626.8	ENSMUSG00000062296.9	Trank1	chr9	protein_coding	tetratricopeptide repeat and ankyrin repeat containing 1
chr9	111181312	111184912	+	111181312	111191326	A3SS	0.5	50	50	ENSMUST00000078626.8	ENSMUSG00000062296.9	Trank1	chr9	protein_coding	tetratricopeptide repeat and ankyrin repeat containing 1
chr9	111203993	111206846	+	111202613	111206846	A5SS	0.5	50	50	ENSMUST00000078626.8	ENSMUSG00000062296.9	Trank1	chr9	protein_coding	tetratricopeptide repeat and ankyrin repeat containing 1
chr9	111212230	111214089	+	111212230	111214187	A3SS	0.33	50	50	ENSMUST00000198890.5	ENSMUSG00000062296.9	Trank1	chr9	protein_coding	tetratricopeptide repeat and ankyrin repeat containing 1
chr9	111212230	111215439	+	111212230	111214089	3pMXE	0.33	50	50	ENSMUST00000200272.2	ENSMUSG00000062296.9	Trank1	chr9	protein_coding	tetratricopeptide repeat and ankyrin repeat containing 1
chr9	111435989;111464120	111463874;111519066	-	111435989	111519066	cassetteExon	0.5	100	100	ENSMUST00000161995.2	ENSMUSG00000032502.9	Stac	chr9	protein_coding	src homology three (SH3) and cysteine rich domain
chr9	111435989;111464153	111463874;111519066	-	111435989	111519066	cassetteExon	0.5	100	100	ENSMUST00000161995.2	ENSMUSG00000032502.9	Stac	chr9	protein_coding	src homology three (SH3) and cysteine rich domain
chr9	111464120	111519066	-	111464153	111519066	A3SS	0.33	50	50	ENSMUST00000035083.8	ENSMUSG00000032502.9	Stac	chr9	protein_coding	src homology three (SH3) and cysteine rich domain
chr9	111435989	111519066	-	111464120	111519066	3pMXE	0.33	50	50	ENSMUST00000162345.2	ENSMUSG00000032502.9	Stac	chr9	protein_coding	src homology three (SH3) and cysteine rich domain
chr9	111954068	111956347	-	111954068;111955607	111955503;111956347	ES	0.5	50	50	ENSMUST00000070218.12	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	111972606	111978403	-	111972606;111976550	111976491;111978403	ES	0.5	50	50	ENSMUST00000070218.12	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	111978440	112005163	-	111978440;111986866	111986758;112005163	ES	0.25	50	50	ENSMUST00000070218.12	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112014837	112015055	-	112014837	112014976	5pMXE	0.2	50	50	ENSMUST00000070218.12	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112014837	112016538	-	112014837	112014976	5pMXE	0.2	50	50	ENSMUST00000070218.12	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112014837	112016658	-	112014837	112014976	5pMXE	0.2	50	50	ENSMUST00000070218.12	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112014837	112063378	-	112014837	112014976	5pMXE	0.2	50	50	ENSMUST00000070218.12	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	111978440;111984584	111984486;111986758	-	111978440	111986758	cassetteExon	0.5	100	100	ENSMUST00000070218.12	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	111978440;111984587	111984486;111986758	-	111978440	111986758	cassetteExon	0.5	100	100	ENSMUST00000070218.12	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	111945835	111948251	-	111896377	111948251	A3SS	0.5	50	50	ENSMUST00000070218.12	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	111990701	112005163	-	111986866	112005163	A3SS	0.25	50	50	ENSMUST00000070218.12	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112011888	112012563	-	112008240	112012563	A3SS	0.5	50	50	ENSMUST00000070218.12	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112014837	112063378	-	112014837	112016658	5pMXE	0.2	50	50	ENSMUST00000111872.9	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112014837;112016575	112016538;112016658	-	112014837	112016658	cassetteExon	0.5	100	100	ENSMUST00000111872.9	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112014837	112015055	-	112014837	112016658	A5SS	0.2	50	50	ENSMUST00000111872.9	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	111984587	111986758	-	111984584	111986758	A3SS	0.33	50	50	ENSMUST00000164754.9	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	111978440	112005163	-	111978440;111986866	111984486;112005163	ES	0.25	50	50	ENSMUST00000159432.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112014837;112016834	112016538;112063378	-	112014837	112063378	cassetteExon	0.5	100	100	ENSMUST00000159432.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112014837;112016834	112016658;112063378	-	112014837	112063378	cassetteExon	0.5	100	100	ENSMUST00000159432.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112035412	112063378	-	112014837	112063378	A3SS	0.33	50	50	ENSMUST00000159432.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	111978440	111986758	-	111978440	111984486	A5SS	0.33	50	50	ENSMUST00000159432.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112014837	112015055	-	112014837	112063378	A5SS	0.2	50	50	ENSMUST00000159432.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112063378	-	112016834;112035412	112035313;112063378	ES	0.33	50	50	ENSMUST00000162097.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112016929	-	112016834	112035313	A5SS	0.08	50	50	ENSMUST00000162097.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112017192	-	112016834	112035313	A5SS	0.08	50	50	ENSMUST00000162097.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112045724	-	112016834	112035313	A5SS&ES	0.08	50	50	ENSMUST00000162097.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112045996	-	112016834	112035313	A5SS&ES	0.08	50	50	ENSMUST00000162097.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112046296	-	112016834	112035313	A5SS&ES	0.08	50	50	ENSMUST00000162097.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112046324	-	112016834	112035313	A5SS&ES	0.08	50	50	ENSMUST00000162097.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112060715	-	112016834	112035313	A5SS&ES	0.08	50	50	ENSMUST00000162097.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112061403	-	112016834	112035313	A5SS&ES	0.08	50	50	ENSMUST00000162097.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112062160	-	112016834	112035313	A5SS&ES	0.08	50	50	ENSMUST00000162097.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112062714	-	112016834	112035313	A5SS&ES	0.08	50	50	ENSMUST00000162097.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112035412	112045724	-	112035412	112063378	A5SS	0.33	50	50	ENSMUST00000162097.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112035412	112062865	-	112035412	112063378	A5SS	0.33	50	50	ENSMUST00000162097.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112062160	-	112016834	112061403	5pMXE	0.07	50	50	ENSMUST00000035085.12	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112062714	-	112016834	112061403	5pMXE	0.07	50	50	ENSMUST00000035085.12	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112063378	-	112016834	112061403	5pMXE	0.07	50	50	ENSMUST00000035085.12	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112064718	-	112016834	112061403	5pMXE	0.07	50	50	ENSMUST00000035085.12	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112016929	-	112016834	112061403	A5SS	0.07	50	50	ENSMUST00000035085.12	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112017192	-	112016834	112061403	A5SS	0.07	50	50	ENSMUST00000035085.12	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112045724	-	112016834	112061403	A5SS	0.07	50	50	ENSMUST00000035085.12	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112045996	-	112016834	112061403	A5SS	0.07	50	50	ENSMUST00000035085.12	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112046296	-	112016834	112061403	A5SS	0.07	50	50	ENSMUST00000035085.12	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112046324	-	112016834	112061403	A5SS	0.07	50	50	ENSMUST00000035085.12	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112060715	-	112016834	112061403	A5SS	0.07	50	50	ENSMUST00000035085.12	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	111972606	112005163	-	111972606;111978440	111978403;112005163	ES	0.25	50	50	ENSMUST00000159246.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	111990701	112005163	-	111978440	112005163	A3SS	0.25	50	50	ENSMUST00000159246.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	111978440	111984486	-	111978440	112005163	A5SS	0.33	50	50	ENSMUST00000159246.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112060715	-	112016834	112045996	5pMXE	0.07	50	50	ENSMUST00000159451.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112062160	-	112016834	112045996	5pMXE	0.07	50	50	ENSMUST00000159451.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112062714	-	112016834	112045996	5pMXE	0.07	50	50	ENSMUST00000159451.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112063378	-	112016834	112045996	5pMXE	0.07	50	50	ENSMUST00000159451.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112064718	-	112016834	112045996	5pMXE	0.07	50	50	ENSMUST00000159451.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	111986866	112005163	-	111972606	112005163	A3SS	0.25	50	50	ENSMUST00000159451.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	111990701	112005163	-	111972606	112005163	A3SS	0.25	50	50	ENSMUST00000159451.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	111972606	111976491	-	111972606	112005163	A5SS	0.33	50	50	ENSMUST00000159451.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112016929	-	112016834	112045996	A5SS	0.07	50	50	ENSMUST00000159451.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112017192	-	112016834	112045996	A5SS	0.07	50	50	ENSMUST00000159451.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112045724	-	112016834	112045996	A5SS	0.07	50	50	ENSMUST00000159451.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112046296	-	112016834	112045996	A5SS	0.07	50	50	ENSMUST00000159451.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112046324	-	112016834	112045996	A5SS	0.07	50	50	ENSMUST00000159451.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	111978440	111986758	-	111984587	111986758	3pMXE	0.33	50	50	ENSMUST00000159667.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112064718	-	112016834	112063378	5pMXE	0.07	50	50	ENSMUST00000159667.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112016929	-	112016834	112063378	A5SS	0.07	50	50	ENSMUST00000159667.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112017192	-	112016834	112063378	A5SS	0.07	50	50	ENSMUST00000159667.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112045724	-	112016834	112063378	A5SS	0.07	50	50	ENSMUST00000159667.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112046296	-	112016834	112063378	A5SS	0.07	50	50	ENSMUST00000159667.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112046324	-	112016834	112063378	A5SS	0.07	50	50	ENSMUST00000159667.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112060715	-	112016834	112063378	A5SS	0.07	50	50	ENSMUST00000159667.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112062160	-	112016834	112063378	A5SS	0.07	50	50	ENSMUST00000159667.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112062714	-	112016834	112063378	A5SS	0.07	50	50	ENSMUST00000159667.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112060715	-	112016834	112046324	5pMXE	0.07	50	50	ENSMUST00000161412.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112062160	-	112016834	112046324	5pMXE	0.07	50	50	ENSMUST00000161412.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112062714	-	112016834	112046324	5pMXE	0.07	50	50	ENSMUST00000161412.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112064718	-	112016834	112046324	5pMXE	0.07	50	50	ENSMUST00000161412.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834;112045788	112045724;112046324	-	112016834	112046324	cassetteExon	0.5	100	100	ENSMUST00000161412.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112016929	-	112016834	112046324	A5SS	0.07	50	50	ENSMUST00000161412.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112017192	-	112016834	112046324	A5SS	0.07	50	50	ENSMUST00000161412.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112046296	-	112016834	112046324	A5SS	0.07	50	50	ENSMUST00000161412.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112062714	-	112016834	112062160	5pMXE	0.07	50	50	ENSMUST00000161138.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112064718	-	112016834	112062160	5pMXE	0.07	50	50	ENSMUST00000161138.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112016929	-	112016834	112062160	A5SS	0.07	50	50	ENSMUST00000161138.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112017192	-	112016834	112062160	A5SS	0.07	50	50	ENSMUST00000161138.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112045724	-	112016834	112062160	A5SS	0.07	50	50	ENSMUST00000161138.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112046296	-	112016834	112062160	A5SS	0.07	50	50	ENSMUST00000161138.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112060715	-	112016834	112062160	A5SS	0.07	50	50	ENSMUST00000161138.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834;112035412	112035313;112045724	-	112016834	112045724	cassetteExon	0.5	100	100	ENSMUST00000162796.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112016929	-	112016834	112045724	A5SS	0.14	50	50	ENSMUST00000162796.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112017192	-	112016834	112045724	A5SS	0.14	50	50	ENSMUST00000162796.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112046296	-	112016834	112045724	A5SS&ES	0.14	50	50	ENSMUST00000162796.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112045788	112046296	-	112045788	112046324	A5SS	0.5	50	50	ENSMUST00000162796.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112060715	-	112016834	112046296	5pMXE	0.07	50	50	ENSMUST00000161097.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112062714	-	112016834	112046296	5pMXE	0.07	50	50	ENSMUST00000161097.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112064718	-	112016834	112046296	5pMXE	0.07	50	50	ENSMUST00000161097.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834;112045788	112045724;112046296	-	112016834	112046296	cassetteExon	0.5	100	100	ENSMUST00000161097.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112016929	-	112016834	112046296	A5SS	0.07	50	50	ENSMUST00000161097.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112017192	-	112016834	112046296	A5SS	0.07	50	50	ENSMUST00000161097.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112064718	-	112016834	112062714	5pMXE	0.07	50	50	ENSMUST00000160478.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112016929	-	112016834	112062714	A5SS	0.07	50	50	ENSMUST00000160478.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112017192	-	112016834	112062714	A5SS	0.07	50	50	ENSMUST00000160478.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112045724	-	112016834	112062714	A5SS	0.07	50	50	ENSMUST00000160478.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112060715	-	112016834	112062714	A5SS	0.07	50	50	ENSMUST00000160478.8	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112017192	-	112016834	112016929	5pMXE	0.07	50	50	ENSMUST00000172380.10	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112060715	-	112016834	112016929	5pMXE	0.07	50	50	ENSMUST00000172380.10	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112064718	-	112016834	112016929	5pMXE	0.07	50	50	ENSMUST00000172380.10	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112014837	112015055	-	112014837	112016538	A5SS	0.25	50	50	ENSMUST00000172380.10	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112064718	-	112016834	112060715	5pMXE	0.07	50	50	ENSMUST00000163025.2	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112017192	-	112016834	112060715	A5SS	0.07	50	50	ENSMUST00000163025.2	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112045724	-	112016834	112060715	A5SS	0.07	50	50	ENSMUST00000163025.2	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112035412	112045724	-	112035412	112062865	A5SS	0.33	50	50	ENSMUST00000162840.2	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112017192	-	112016834	112064718	A5SS	0.07	50	50	ENSMUST00000161945.2	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112035313	-	112016834	112064718	A5SS	0.07	50	50	ENSMUST00000161945.2	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112045724	-	112016834	112064718	A5SS	0.07	50	50	ENSMUST00000161945.2	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834;112017048	112016929;112017192	-	112016834	112017192	cassetteExon	0.5	100	100	ENSMUST00000163004.2	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112017192	-	112017048	112017192	3pMXE	0.5	50	50	ENSMUST00000161261.2	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112016834	112045724	-	112035412	112045724	3pMXE	0.5	50	50	ENSMUST00000162050.2	ENSMUSG00000032503.19	Arpp21	chr9	protein_coding	cyclic AMP-regulated phosphoprotein, 21
chr9	112063445	112105663	+	112063445	112064171	3pMXE	0.5	50	50	ENSMUST00000149308.4	ENSMUSG00000087038.10	2900079G21Rik	chr9	lncRNA	RIKEN cDNA 2900079G21 gene
chr9	112063671	112064171	+	112063445	112064171	A5SS	0.5	50	50	ENSMUST00000149308.4	ENSMUSG00000087038.10	2900079G21Rik	chr9	lncRNA	RIKEN cDNA 2900079G21 gene
chr9	112107769	112174405	+	112107769	112108311	3pMXE	0.5	50	50	ENSMUST00000144424.9	ENSMUSG00000087038.10	2900079G21Rik	chr9	lncRNA	RIKEN cDNA 2900079G21 gene
chr9	112085817	112107622	+	112107283	112107622	A5SS&ES	0.5	50	50	ENSMUST00000144424.9	ENSMUSG00000087038.10	2900079G21Rik	chr9	lncRNA	RIKEN cDNA 2900079G21 gene
chr9	112933155	112952050	-	112933155;112933932	112933780;112952050	ES	0.5	50	50	ENSMUST00000213712.2	ENSMUSG00000110996.2	Gm36251	chr9	lncRNA	predicted gene, 36251
chr9	112929927	112933090	-	112915895	112933090	A3SS	0.5	50	50	ENSMUST00000214620.2	ENSMUSG00000110996.2	Gm36251	chr9	lncRNA	predicted gene, 36251
chr9	112915895	112927270	-	112915895	112933090	A5SS	0.5	50	50	ENSMUST00000214620.2	ENSMUSG00000110996.2	Gm36251	chr9	lncRNA	predicted gene, 36251
chr9	113351590	113440758	-	113351590	113416161	5pMXE	0.5	50	50	ENSMUST00000209897.2	ENSMUSG00000109890.3	AU023762	chr9	lncRNA	expressed sequence AU023762
chr9	113330421	113337276	-	113330421	113351479	A5SS	0.33	50	50	ENSMUST00000209897.2	ENSMUSG00000109890.3	AU023762	chr9	lncRNA	expressed sequence AU023762
chr9	113330421	113340437	-	113330421	113351479	A5SS	0.33	50	50	ENSMUST00000209897.2	ENSMUSG00000109890.3	AU023762	chr9	lncRNA	expressed sequence AU023762
chr9	113330421	113337276	-	113330421	113340437	A5SS	0.33	50	50	ENSMUST00000210875.2	ENSMUSG00000109890.3	AU023762	chr9	lncRNA	expressed sequence AU023762
chr9	113434140	113440758	-	113351590	113440758	A3SS	0.5	50	50	ENSMUST00000209241.2	ENSMUSG00000109890.3	AU023762	chr9	lncRNA	expressed sequence AU023762
chr9	113507497;113508862	113508768;113509021	-	113507497	113509021	cassetteExon	0.5	100	100	ENSMUST00000035086.13	ENSMUSG00000032504.16	Pdcd6ip	chr9	protein_coding	programmed cell death 6 interacting protein
chr9	113514506	113516693	-	113514491	113516693	A3SS	0.5	50	50	ENSMUST00000035086.13	ENSMUSG00000032504.16	Pdcd6ip	chr9	protein_coding	programmed cell death 6 interacting protein
chr9	113664322;113670243	113670227;113670627	+	113664322	113670627	cassetteExon	0.5	100	100	ENSMUST00000213663.2	ENSMUSG00000033392.17	Clasp2	chr9	protein_coding	CLIP associating protein 2
chr9	113570943	113576794	+	113570943	113590658	A3SS	0.5	50	50	ENSMUST00000213663.2	ENSMUSG00000033392.17	Clasp2	chr9	protein_coding	CLIP associating protein 2
chr9	113670719	113670936	+	113670719	113673142	A3SS	0.5	50	50	ENSMUST00000213663.2	ENSMUSG00000033392.17	Clasp2	chr9	protein_coding	CLIP associating protein 2
chr9	113622534	113642210	+	113615702	113642210	A5SS	0.33	50	50	ENSMUST00000213663.2	ENSMUSG00000033392.17	Clasp2	chr9	protein_coding	CLIP associating protein 2
chr9	113641834	113642210	+	113615702	113642210	A5SS	0.33	50	50	ENSMUST00000213663.2	ENSMUSG00000033392.17	Clasp2	chr9	protein_coding	CLIP associating protein 2
chr9	113641834	113642210	+	113622534	113642210	A5SS	0.33	50	50	ENSMUST00000213902.2	ENSMUSG00000033392.17	Clasp2	chr9	protein_coding	CLIP associating protein 2
chr9	113699798;113704395	113704333;113705312	+	113699798	113705312	cassetteExon	0.5	100	100	ENSMUST00000111838.10	ENSMUSG00000033392.17	Clasp2	chr9	protein_coding	CLIP associating protein 2
chr9	113710819;113716115	113716113;113719026	+	113710819	113719026	cassetteExon	0.5	100	100	ENSMUST00000111838.10	ENSMUSG00000033392.17	Clasp2	chr9	protein_coding	CLIP associating protein 2
chr9	113691355	113691504	+	113691355	113697616	A3SS	0.5	50	50	ENSMUST00000111838.10	ENSMUSG00000033392.17	Clasp2	chr9	protein_coding	CLIP associating protein 2
chr9	113694180	113697616	+	113691355	113697616	A5SS	0.5	50	50	ENSMUST00000111838.10	ENSMUSG00000033392.17	Clasp2	chr9	protein_coding	CLIP associating protein 2
chr9	113788007	113793620	+	113788007;113788551	113788444;113793620	ES	0.5	50	50	ENSMUST00000084885.12	ENSMUSG00000009741.16	Ubp1	chr9	protein_coding	upstream binding protein 1
chr9	113801961	113802633	+	113801961	113802587	A3SS	0.5	50	50	ENSMUST00000084885.12	ENSMUSG00000009741.16	Ubp1	chr9	protein_coding	upstream binding protein 1
chr9	113802709	113804414	+	113802638	113804414	A5SS	0.5	50	50	ENSMUST00000084885.12	ENSMUSG00000009741.16	Ubp1	chr9	protein_coding	upstream binding protein 1
chr9	113847118	113875141	-	113847118	113855761	5pMXE	0.5	50	50	ENSMUST00000117537.8	ENSMUSG00000032507.16	Fbxl2	chr9	protein_coding	F-box and leucine-rich repeat protein 2
chr9	113832564;113833262	113833105;113847057	-	113832564	113847057	cassetteExon	0.5	100	100	ENSMUST00000117537.8	ENSMUSG00000032507.16	Fbxl2	chr9	protein_coding	F-box and leucine-rich repeat protein 2
chr9	113812610	113813053	-	113808738	113813053	A3SS	0.5	50	50	ENSMUST00000117537.8	ENSMUSG00000032507.16	Fbxl2	chr9	protein_coding	F-box and leucine-rich repeat protein 2
chr9	113813184	113813609	-	113813109	113813609	A3SS	0.5	50	50	ENSMUST00000117537.8	ENSMUSG00000032507.16	Fbxl2	chr9	protein_coding	F-box and leucine-rich repeat protein 2
chr9	113818542	113819686	-	113818504	113819686	A3SS	0.5	50	50	ENSMUST00000117537.8	ENSMUSG00000032507.16	Fbxl2	chr9	protein_coding	F-box and leucine-rich repeat protein 2
chr9	113819945	113820412	-	113819945	113829566	A5SS	0.5	50	50	ENSMUST00000117537.8	ENSMUSG00000032507.16	Fbxl2	chr9	protein_coding	F-box and leucine-rich repeat protein 2
chr9	114083575	114090272	-	114083572	114090272	A3SS	0.5	50	50	ENSMUST00000213446.2	ENSMUSG00000064299.7	4921528I07Rik	chr9	lncRNA	RIKEN cDNA 4921528I07 gene
chr9	114108437	114111356	-	114108437	114129045	A5SS	0.5	50	50	ENSMUST00000213446.2	ENSMUSG00000064299.7	4921528I07Rik	chr9	lncRNA	RIKEN cDNA 4921528I07 gene
chr9	114197552	114198057	+	114197552;114197967	114197912;114198057	ES	0.5	50	50	ENSMUST00000124664.8	ENSMUSG00000074039.11	4930520O04Rik	chr9	lncRNA	RIKEN cDNA 4930520O04 gene
chr9	114197552	114198057	+	114197967	114198057	A5SS	0.5	50	50	ENSMUST00000131898.2	ENSMUSG00000074039.11	4930520O04Rik	chr9	lncRNA	RIKEN cDNA 4930520O04 gene
chr9	114230337	114249421	+	114230337;114246198	114246029;114249421	ES	0.5	50	50	ENSMUST00000063042.11	ENSMUSG00000045594.11	Glb1	chr9	protein_coding	galactosidase, beta 1
chr9	114230337	114233589	+	114230337	114246029	A3SS	0.33	50	50	ENSMUST00000063042.11	ENSMUSG00000045594.11	Glb1	chr9	protein_coding	galactosidase, beta 1
chr9	114272280	114279665	+	114272189	114279665	A5SS	0.5	50	50	ENSMUST00000063042.11	ENSMUSG00000045594.11	Glb1	chr9	protein_coding	galactosidase, beta 1
chr9	114230337	114233589	+	114230337	114249421	A3SS	0.33	50	50	ENSMUST00000217583.2	ENSMUSG00000045594.11	Glb1	chr9	protein_coding	galactosidase, beta 1
chr9	114322123	114330877	-	114322123	114325566	5pMXE	0.33	50	50	ENSMUST00000054414.5	ENSMUSG00000047898.8	Ccr4	chr9	protein_coding	chemokine (C-C motif) receptor 4
chr9	114322123	114325002	-	114322123	114325566	A5SS	0.33	50	50	ENSMUST00000054414.5	ENSMUSG00000047898.8	Ccr4	chr9	protein_coding	chemokine (C-C motif) receptor 4
chr9	114322123	114330877	-	114322123	114325002	5pMXE	0.33	50	50	ENSMUST00000215425.2	ENSMUSG00000047898.8	Ccr4	chr9	protein_coding	chemokine (C-C motif) receptor 4
chr9	114442868	114446860	-	114442868;114444178	114444057;114446860	ES	0.5	50	50	ENSMUST00000070117.8	ENSMUSG00000056167.9	Cnot10	chr9	protein_coding	CCR4-NOT transcription complex, subunit 10
chr9	114456603	114460890	-	114456603;114458225	114458075;114460890	ES	0.5	50	50	ENSMUST00000070117.8	ENSMUSG00000056167.9	Cnot10	chr9	protein_coding	CCR4-NOT transcription complex, subunit 10
chr9	114458225	114461745	-	114458225;114461051	114460890;114461745	ES	0.5	50	50	ENSMUST00000070117.8	ENSMUSG00000056167.9	Cnot10	chr9	protein_coding	CCR4-NOT transcription complex, subunit 10
chr9	114461839;114464446	114464348;114468987	-	114461839	114468987	cassetteExon	0.5	100	100	ENSMUST00000070117.8	ENSMUSG00000056167.9	Cnot10	chr9	protein_coding	CCR4-NOT transcription complex, subunit 10
chr9	114448440	114451913	-	114444178	114451913	A3SS	0.5	50	50	ENSMUST00000217148.2	ENSMUSG00000056167.9	Cnot10	chr9	protein_coding	CCR4-NOT transcription complex, subunit 10
chr9	114442868	114446860	-	114442868	114444057	A5SS&ES	0.5	50	50	ENSMUST00000217148.2	ENSMUSG00000056167.9	Cnot10	chr9	protein_coding	CCR4-NOT transcription complex, subunit 10
chr9	114444178	114446860	-	114444178	114451913	A5SS	0.5	50	50	ENSMUST00000217148.2	ENSMUSG00000056167.9	Cnot10	chr9	protein_coding	CCR4-NOT transcription complex, subunit 10
chr9	114442868;114444178	114444057;114451913	-	114442868;114448440	114446860;114451913	MXE	0.5	100	100	ENSMUST00000215155.2	ENSMUSG00000056167.9	Cnot10	chr9	protein_coding	CCR4-NOT transcription complex, subunit 10
chr9	114456603;114458225	114458075;114461745	-	114456603;114461051	114460890;114461745	MXE	0.5	100	100	ENSMUST00000213955.2	ENSMUSG00000056167.9	Cnot10	chr9	protein_coding	CCR4-NOT transcription complex, subunit 10
chr9	114458225	114461745	-	114461051	114461745	3pMXE	0.5	50	50	ENSMUST00000238809.2	ENSMUSG00000056167.9	Cnot10	chr9	protein_coding	CCR4-NOT transcription complex, subunit 10
chr9	114560441	114566251	+	114560282	114566251	A5SS	0.5	50	50	ENSMUST00000217637.2	ENSMUSG00000032434.10	Cmtm6	chr9	protein_coding	CKLF-like MARVEL transmembrane domain containing 6
chr9	114587954	114592287	-	114587954;114591073	114590975;114592287	ES	0.5	50	50	ENSMUST00000035009.16	ENSMUSG00000032436.18	Cmtm7	chr9	protein_coding	CKLF-like MARVEL transmembrane domain containing 7
chr9	114600278	114610736	-	114592460	114610736	A3SS	0.5	50	50	ENSMUST00000035009.16	ENSMUSG00000032436.18	Cmtm7	chr9	protein_coding	CKLF-like MARVEL transmembrane domain containing 7
chr9	114592460	114604276	-	114592460	114610736	A5SS	0.5	50	50	ENSMUST00000035009.16	ENSMUSG00000032436.18	Cmtm7	chr9	protein_coding	CKLF-like MARVEL transmembrane domain containing 7
chr9	114734076	114738008	-	114734076	114739944	A5SS	0.5	50	50	ENSMUST00000146623.8	ENSMUSG00000050627.14	Gpd1l	chr9	protein_coding	glycerol-3-phosphate dehydrogenase 1-like
chr9	114746189	114748189	-	114746189	114749590	A5SS	0.5	50	50	ENSMUST00000146623.8	ENSMUSG00000050627.14	Gpd1l	chr9	protein_coding	glycerol-3-phosphate dehydrogenase 1-like
chr9	114819890	114890901	+	114808032	114890901	A5SS	0.2	50	50	ENSMUST00000183104.8	ENSMUSG00000040875.13	Osbpl10	chr9	protein_coding	oxysterol binding protein-like 10
chr9	114828124	114890901	+	114808032	114890901	A5SS	0.2	50	50	ENSMUST00000183104.8	ENSMUSG00000040875.13	Osbpl10	chr9	protein_coding	oxysterol binding protein-like 10
chr9	114845845	114890901	+	114808032	114890901	A5SS	0.2	50	50	ENSMUST00000183104.8	ENSMUSG00000040875.13	Osbpl10	chr9	protein_coding	oxysterol binding protein-like 10
chr9	114883613	114890901	+	114808032	114890901	A5SS	0.2	50	50	ENSMUST00000183104.8	ENSMUSG00000040875.13	Osbpl10	chr9	protein_coding	oxysterol binding protein-like 10
chr9	114896397	114938468	+	114896393	114938468	A5SS	0.5	50	50	ENSMUST00000183104.8	ENSMUSG00000040875.13	Osbpl10	chr9	protein_coding	oxysterol binding protein-like 10
chr9	114918288	114996150	+	114938659	114996150	A5SS&ES	0.33	50	50	ENSMUST00000183104.8	ENSMUSG00000040875.13	Osbpl10	chr9	protein_coding	oxysterol binding protein-like 10
chr9	114949657	114996150	+	114938659	114996150	A5SS	0.33	50	50	ENSMUST00000183104.8	ENSMUSG00000040875.13	Osbpl10	chr9	protein_coding	oxysterol binding protein-like 10
chr9	114828124	114890901	+	114819890	114890901	A5SS	0.2	50	50	ENSMUST00000182384.8	ENSMUSG00000040875.13	Osbpl10	chr9	protein_coding	oxysterol binding protein-like 10
chr9	114845845	114890901	+	114819890	114890901	A5SS	0.2	50	50	ENSMUST00000182384.8	ENSMUSG00000040875.13	Osbpl10	chr9	protein_coding	oxysterol binding protein-like 10
chr9	114883613	114890901	+	114819890	114890901	A5SS	0.2	50	50	ENSMUST00000182384.8	ENSMUSG00000040875.13	Osbpl10	chr9	protein_coding	oxysterol binding protein-like 10
chr9	114845845	114890901	+	114828124	114890901	A5SS	0.2	50	50	ENSMUST00000183141.8	ENSMUSG00000040875.13	Osbpl10	chr9	protein_coding	oxysterol binding protein-like 10
chr9	114883613	114890901	+	114828124	114890901	A5SS	0.2	50	50	ENSMUST00000183141.8	ENSMUSG00000040875.13	Osbpl10	chr9	protein_coding	oxysterol binding protein-like 10
chr9	114883613	114890901	+	114845845	114890901	A5SS	0.2	50	50	ENSMUST00000182199.8	ENSMUSG00000040875.13	Osbpl10	chr9	protein_coding	oxysterol binding protein-like 10
chr9	114949657	114996150	+	114918288	114996150	A5SS	0.33	50	50	ENSMUST00000182363.8	ENSMUSG00000040875.13	Osbpl10	chr9	protein_coding	oxysterol binding protein-like 10
chr9	115859898	115903008	+	115859898	115869971	3pMXE	0.5	50	50	ENSMUST00000119291.8	ENSMUSG00000056880.13	Gadl1	chr9	protein_coding	glutamate decarboxylase-like 1
chr9	115960781	116004012	-	115960781;115987413	115987339;116004012	ES	0.5	50	50	ENSMUST00000061101.12	ENSMUSG00000032440.14	Tgfbr2	chr9	protein_coding	transforming growth factor, beta receptor II
chr9	116407770	116415086	-	116407770;116411933	116411806;116415086	ES	0.5	50	50	ENSMUST00000111773.10	ENSMUSG00000039607.18	Rbms3	chr9	protein_coding	RNA binding motif, single stranded interacting protein
chr9	116415163	116465437	-	116415163;116457005	116456958;116465437	ES	0.33	50	50	ENSMUST00000111773.10	ENSMUSG00000039607.18	Rbms3	chr9	protein_coding	RNA binding motif, single stranded interacting protein
chr9	116465547	116510199	-	116465547;116507765	116507715;116510199	ES	0.5	50	50	ENSMUST00000111773.10	ENSMUSG00000039607.18	Rbms3	chr9	protein_coding	RNA binding motif, single stranded interacting protein
chr9	116651964;116677693	116677646;116788536	-	116651964	116788536	cassetteExon	0.5	100	100	ENSMUST00000111773.10	ENSMUSG00000039607.18	Rbms3	chr9	protein_coding	RNA binding motif, single stranded interacting protein
chr9	116773490	116788536	-	116651964	116788536	A3SS	0.33	50	50	ENSMUST00000111773.10	ENSMUSG00000039607.18	Rbms3	chr9	protein_coding	RNA binding motif, single stranded interacting protein
chr9	116939183	117080795	-	116939186	117080795	A3SS	0.5	50	50	ENSMUST00000111773.10	ENSMUSG00000039607.18	Rbms3	chr9	protein_coding	RNA binding motif, single stranded interacting protein
chr9	116939186	117080522	-	116939186	117080795	A5SS	0.5	50	50	ENSMUST00000111773.10	ENSMUSG00000039607.18	Rbms3	chr9	protein_coding	RNA binding motif, single stranded interacting protein
chr9	116415163;116507765	116507715;116510199	-	116415163;116465547	116456958;116510199	MXE	0.5	100	100	ENSMUST00000068962.14	ENSMUSG00000039607.18	Rbms3	chr9	protein_coding	RNA binding motif, single stranded interacting protein
chr9	116407770;116415163	116415086;116465437	-	116407770	116465437	cassetteExon	0.5	100	100	ENSMUST00000173429.8	ENSMUSG00000039607.18	Rbms3	chr9	protein_coding	RNA binding motif, single stranded interacting protein
chr9	116457005	116465437	-	116407770	116465437	A3SS	0.33	50	50	ENSMUST00000173429.8	ENSMUSG00000039607.18	Rbms3	chr9	protein_coding	RNA binding motif, single stranded interacting protein
chr9	116407770	116411806	-	116407770	116465437	A5SS	0.33	50	50	ENSMUST00000173429.8	ENSMUSG00000039607.18	Rbms3	chr9	protein_coding	RNA binding motif, single stranded interacting protein
chr9	116939183	117080795	-	116939183	117181457	A5SS	0.5	50	50	ENSMUST00000164018.9	ENSMUSG00000039607.18	Rbms3	chr9	protein_coding	RNA binding motif, single stranded interacting protein
chr9	117181630	117428588	-	117181630	117458868	A5SS	0.5	50	50	ENSMUST00000164018.9	ENSMUSG00000039607.18	Rbms3	chr9	protein_coding	RNA binding motif, single stranded interacting protein
chr9	117537907	117701534	-	117428656	117701534	A3SS	0.5	50	50	ENSMUST00000239475.2	ENSMUSG00000039607.18	Rbms3	chr9	protein_coding	RNA binding motif, single stranded interacting protein
chr9	116415163	116507715	-	116415163;116465547	116465437;116507715	ES	0.5	50	50	ENSMUST00000111772.10	ENSMUSG00000039607.18	Rbms3	chr9	protein_coding	RNA binding motif, single stranded interacting protein
chr9	116407770	116415086	-	116411933	116415086	3pMXE	0.5	50	50	ENSMUST00000172469.3	ENSMUSG00000039607.18	Rbms3	chr9	protein_coding	RNA binding motif, single stranded interacting protein
chr9	116415163;116465547	116465437;116510199	-	116415163;116507765	116507715;116510199	MXE	0.5	100	100	ENSMUST00000172469.3	ENSMUSG00000039607.18	Rbms3	chr9	protein_coding	RNA binding motif, single stranded interacting protein
chr9	116415163	116456958	-	116415163	116507715	A5SS	0.33	50	50	ENSMUST00000172469.3	ENSMUSG00000039607.18	Rbms3	chr9	protein_coding	RNA binding motif, single stranded interacting protein
chr9	116465547	116510199	-	116507765	116510199	3pMXE	0.5	50	50	ENSMUST00000069095.12	ENSMUSG00000039607.18	Rbms3	chr9	protein_coding	RNA binding motif, single stranded interacting protein
chr9	116773490	116788536	-	116677693	116788536	A3SS	0.33	50	50	ENSMUST00000069095.12	ENSMUSG00000039607.18	Rbms3	chr9	protein_coding	RNA binding motif, single stranded interacting protein
chr9	116651964	116788536	-	116677693	116788536	3pMXE	0.33	50	50	ENSMUST00000174276.8	ENSMUSG00000039607.18	Rbms3	chr9	protein_coding	RNA binding motif, single stranded interacting protein
chr9	117793646	117842942	-	117793646;117828019	117827860;117842942	ES	0.5	50	50	ENSMUST00000111769.11	ENSMUSG00000032443.18	Zcwpw2	chr9	protein_coding	zinc finger, CW type with PWWP domain 2
chr9	117758249;117774734	117774667;117776914	-	117758249	117776914	cassetteExon	0.5	100	100	ENSMUST00000111769.11	ENSMUSG00000032443.18	Zcwpw2	chr9	protein_coding	zinc finger, CW type with PWWP domain 2
chr9	117753541	117758152	-	117741106	117758152	A3SS	0.5	50	50	ENSMUST00000111769.11	ENSMUSG00000032443.18	Zcwpw2	chr9	protein_coding	zinc finger, CW type with PWWP domain 2
chr9	117776972	117789035	-	117741106	117789035	A3SS	0.5	50	50	ENSMUST00000191100.2	ENSMUSG00000032443.18	Zcwpw2	chr9	protein_coding	zinc finger, CW type with PWWP domain 2
chr9	117741106	117758152	-	117741106	117789035	A5SS	0.5	50	50	ENSMUST00000191100.2	ENSMUSG00000032443.18	Zcwpw2	chr9	protein_coding	zinc finger, CW type with PWWP domain 2
chr9	117878503	117880422	+	117878503;117879064	117878965;117880422	ES	0.33	50	50	ENSMUST00000044454.12	ENSMUSG00000039285.13	Azi2	chr9	protein_coding	5-azacytidine induced gene 2
chr9	117888243	117898099	+	117888243	117890782	3pMXE	0.25	50	50	ENSMUST00000044454.12	ENSMUSG00000039285.13	Azi2	chr9	protein_coding	5-azacytidine induced gene 2
chr9	117888243;117888734	117888688;117890782	+	117888243	117890782	cassetteExon	0.5	100	100	ENSMUST00000044454.12	ENSMUSG00000039285.13	Azi2	chr9	protein_coding	5-azacytidine induced gene 2
chr9	117888243;117890585	117890518;117890782	+	117888243	117890782	cassetteExon	0.5	100	100	ENSMUST00000044454.12	ENSMUSG00000039285.13	Azi2	chr9	protein_coding	5-azacytidine induced gene 2
chr9	117869944	117876481	+	117870026	117876481	A5SS	0.5	50	50	ENSMUST00000044454.12	ENSMUSG00000039285.13	Azi2	chr9	protein_coding	5-azacytidine induced gene 2
chr9	117880162	117880422	+	117879064	117880422	A5SS	0.33	50	50	ENSMUST00000044454.12	ENSMUSG00000039285.13	Azi2	chr9	protein_coding	5-azacytidine induced gene 2
chr9	117888243	117888688	+	117888243	117898099	A3SS	0.25	50	50	ENSMUST00000154583.8	ENSMUSG00000039285.13	Azi2	chr9	protein_coding	5-azacytidine induced gene 2
chr9	117888243	117890518	+	117888243	117898099	A3SS	0.25	50	50	ENSMUST00000154583.8	ENSMUSG00000039285.13	Azi2	chr9	protein_coding	5-azacytidine induced gene 2
chr9	117880162	117880422	+	117878503	117880422	A5SS	0.33	50	50	ENSMUST00000154583.8	ENSMUSG00000039285.13	Azi2	chr9	protein_coding	5-azacytidine induced gene 2
chr9	117878503	117880422	+	117878503	117878965	3pMXE	0.5	50	50	ENSMUST00000143024.2	ENSMUSG00000039285.13	Azi2	chr9	protein_coding	5-azacytidine induced gene 2
chr9	117888243;117890585	117890518;117890782	+	117888243;117888734	117888688;117890782	MXE	0.5	100	100	ENSMUST00000130735.8	ENSMUSG00000039285.13	Azi2	chr9	protein_coding	5-azacytidine induced gene 2
chr9	117944497	117979136	-	117944497	117979085	A5SS	0.5	50	50	ENSMUST00000044220.11	ENSMUSG00000039163.11	Cmc1	chr9	protein_coding	COX assembly mitochondrial protein 1
chr9	118311362	118313342	+	118311362	118313399	A3SS	0.5	50	50	ENSMUST00000111763.8	ENSMUSG00000032446.15	Eomes	chr9	protein_coding	eomesodermin
chr9	118366011	118367945	+	118366011;118366393	118366310;118367945	ES	0.5	50	50	ENSMUST00000084820.6	ENSMUSG00000038708.11	Golga4	chr9	protein_coding	golgi autoantigen, golgin subfamily a, 4
chr9	118343337;118348252	118348154;118351586	+	118343337	118351586	cassetteExon	0.5	100	100	ENSMUST00000084820.6	ENSMUSG00000038708.11	Golga4	chr9	protein_coding	golgi autoantigen, golgin subfamily a, 4
chr9	118368092;118377237	118377103;118377691	+	118368092	118377691	cassetteExon	0.5	100	100	ENSMUST00000084820.6	ENSMUSG00000038708.11	Golga4	chr9	protein_coding	golgi autoantigen, golgin subfamily a, 4
chr9	118402089;118405424	118405291;118406210	+	118402089	118406210	cassetteExon	0.5	100	100	ENSMUST00000084820.6	ENSMUSG00000038708.11	Golga4	chr9	protein_coding	golgi autoantigen, golgin subfamily a, 4
chr9	118406296;118408674	118408610;118410917	+	118406296	118410917	cassetteExon	0.5	100	100	ENSMUST00000084820.6	ENSMUSG00000038708.11	Golga4	chr9	protein_coding	golgi autoantigen, golgin subfamily a, 4
chr9	118394735	118395976	+	118394735	118396027	A3SS	0.5	50	50	ENSMUST00000084820.6	ENSMUSG00000038708.11	Golga4	chr9	protein_coding	golgi autoantigen, golgin subfamily a, 4
chr9	118396047	118396259	+	118396047	118396249	A3SS	0.5	50	50	ENSMUST00000084820.6	ENSMUSG00000038708.11	Golga4	chr9	protein_coding	golgi autoantigen, golgin subfamily a, 4
chr9	118406296	118410917	+	118406296	118408610	3pMXE	0.5	50	50	ENSMUST00000211826.2	ENSMUSG00000038708.11	Golga4	chr9	protein_coding	golgi autoantigen, golgin subfamily a, 4
chr9	118514942	118518338	+	118510848	118518338	A5SS	0.5	50	50	ENSMUST00000044165.14	ENSMUSG00000039115.14	Itga9	chr9	protein_coding	integrin alpha 9
chr9	118540849	118598160	+	118527542	118598160	A5SS	0.5	50	50	ENSMUST00000044165.14	ENSMUSG00000039115.14	Itga9	chr9	protein_coding	integrin alpha 9
chr9	118668745	118670161	+	118663443	118670161	A5SS	0.5	50	50	ENSMUST00000044165.14	ENSMUSG00000039115.14	Itga9	chr9	protein_coding	integrin alpha 9
chr9	118701341	118706190	+	118701008	118706190	A5SS	0.5	50	50	ENSMUST00000044165.14	ENSMUSG00000039115.14	Itga9	chr9	protein_coding	integrin alpha 9
chr9	118719417;118720491	118720385;118755202	-	118719417	118755202	cassetteExon	0.5	100	100	ENSMUST00000134688.2	ENSMUSG00000086119.3	Gm2415	chr9	lncRNA	predicted gene 2415
chr9	118735309	118755202	-	118719417	118755202	A3SS	0.33	50	50	ENSMUST00000134688.2	ENSMUSG00000086119.3	Gm2415	chr9	lncRNA	predicted gene 2415
chr9	118735309	118755202	-	118720491	118755202	A3SS	0.33	50	50	ENSMUST00000149952.2	ENSMUSG00000086119.3	Gm2415	chr9	lncRNA	predicted gene 2415
chr9	118840457	118856005	+	118840457;118849112	118849080;118856005	ES	0.5	50	50	ENSMUST00000073109.12	ENSMUSG00000047409.14	Ctdspl	chr9	protein_coding	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
chr9	118759000	118840303	+	118756008	118840303	A5SS	0.5	50	50	ENSMUST00000073109.12	ENSMUSG00000047409.14	Ctdspl	chr9	protein_coding	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
chr9	118882029	118886851	+	118881896	118886851	A5SS	0.5	50	50	ENSMUST00000135872.8	ENSMUSG00000038775.15	Vill	chr9	protein_coding	villin-like
chr9	118894664	118895769	+	118894664;118895086	118894928;118895769	ES	0.5	50	50	ENSMUST00000051386.13	ENSMUSG00000038775.15	Vill	chr9	protein_coding	villin-like
chr9	118897524	118899346	+	118897524;118899136	118898951;118899346	ES	0.5	50	50	ENSMUST00000051386.13	ENSMUSG00000038775.15	Vill	chr9	protein_coding	villin-like
chr9	118899417	118899691	+	118899417	118899625	A3SS	0.5	50	50	ENSMUST00000051386.13	ENSMUSG00000038775.15	Vill	chr9	protein_coding	villin-like
chr9	118892582	118892670	+	118892451	118892670	A5SS	0.5	50	50	ENSMUST00000051386.13	ENSMUSG00000038775.15	Vill	chr9	protein_coding	villin-like
chr9	118892669	118894305	+	118892669	118894527	A3SS	0.33	50	50	ENSMUST00000126251.8	ENSMUSG00000038775.15	Vill	chr9	protein_coding	villin-like
chr9	118892770	118894527	+	118892669	118894527	A5SS	0.5	50	50	ENSMUST00000126251.8	ENSMUSG00000038775.15	Vill	chr9	protein_coding	villin-like
chr9	118897524	118899346	+	118897524	118898951	3pMXE	0.5	50	50	ENSMUST00000153630.2	ENSMUSG00000038775.15	Vill	chr9	protein_coding	villin-like
chr9	118892669	118894305	+	118892669	118897380	A3SS	0.33	50	50	ENSMUST00000153630.2	ENSMUSG00000038775.15	Vill	chr9	protein_coding	villin-like
chr9	118892669	118894527	+	118892669	118897380	A3SS	0.33	50	50	ENSMUST00000153630.2	ENSMUSG00000038775.15	Vill	chr9	protein_coding	villin-like
chr9	118896624	118897380	+	118892669	118897380	A5SS	0.5	50	50	ENSMUST00000153630.2	ENSMUSG00000038775.15	Vill	chr9	protein_coding	villin-like
chr9	118913822	118922426	-	118913822	118917136	5pMXE	0.5	50	50	ENSMUST00000214470.2	ENSMUSG00000010660.4	Plcd1	chr9	protein_coding	phospholipase C, delta 1
chr9	118901662	118902524	-	118901721	118902524	A3SS	0.5	50	50	ENSMUST00000214470.2	ENSMUSG00000010660.4	Plcd1	chr9	protein_coding	phospholipase C, delta 1
chr9	118903048	118903233	-	118902990	118903233	A3SS	0.5	50	50	ENSMUST00000214470.2	ENSMUSG00000010660.4	Plcd1	chr9	protein_coding	phospholipase C, delta 1
chr9	118953986	118956056	+	118953986;118955414	118955222;118956056	ES	0.5	50	50	ENSMUST00000165231.8	ENSMUSG00000038060.16	Dlec1	chr9	protein_coding	deleted in lung and esophageal cancer 1
chr9	118957726	118963537	+	118957726;118959206	118959067;118963537	ES	0.5	50	50	ENSMUST00000165231.8	ENSMUSG00000038060.16	Dlec1	chr9	protein_coding	deleted in lung and esophageal cancer 1
chr9	118965833	118966275	+	118965833	118966272	A3SS	0.5	50	50	ENSMUST00000165231.8	ENSMUSG00000038060.16	Dlec1	chr9	protein_coding	deleted in lung and esophageal cancer 1
chr9	118957726	118963537	+	118957726	118959067	3pMXE	0.5	50	50	ENSMUST00000148611.2	ENSMUSG00000038060.16	Dlec1	chr9	protein_coding	deleted in lung and esophageal cancer 1
chr9	118999705	119002511	-	118999705;119001217	119001109;119002511	ES	0.5	50	50	ENSMUST00000093775.12	ENSMUSG00000070280.14	Slc22a14	chr9	protein_coding	solute carrier family 22 (organic cation transporter), member 14
chr9	119013189	119019243	-	119013189	119019431	A5SS	0.5	50	50	ENSMUST00000093775.12	ENSMUSG00000070280.14	Slc22a14	chr9	protein_coding	solute carrier family 22 (organic cation transporter), member 14
chr9	119113753;119119931	119119803;119123481	-	119113753	119123481	cassetteExon	0.5	100	100	ENSMUST00000040853.11	ENSMUSG00000036737.13	Oxsr1	chr9	protein_coding	oxidative-stress responsive 1
chr9	119076118	119080255	-	119076194	119080255	A3SS	0.5	50	50	ENSMUST00000040853.11	ENSMUSG00000036737.13	Oxsr1	chr9	protein_coding	oxidative-stress responsive 1
chr9	119170225	119170453	+	119168964	119170453	A5SS	0.5	50	50	ENSMUST00000176351.8	ENSMUSG00000036138.17	Acaa1a	chr9	protein_coding	acetyl-Coenzyme A acyltransferase 1A
chr9	119173574	119176796	+	119173574;119175634	119175536;119176796	ES	0.5	50	50	ENSMUST00000177463.8	ENSMUSG00000036138.17	Acaa1a	chr9	protein_coding	acetyl-Coenzyme A acyltransferase 1A
chr9	119177837	119178420	+	119177837;119178166	119177987;119178420	ES	0.5	50	50	ENSMUST00000039784.12	ENSMUSG00000036138.17	Acaa1a	chr9	protein_coding	acetyl-Coenzyme A acyltransferase 1A
chr9	119178166	119178558	+	119178166;119178475	119178420;119178558	ES	0.5	50	50	ENSMUST00000039784.12	ENSMUSG00000036138.17	Acaa1a	chr9	protein_coding	acetyl-Coenzyme A acyltransferase 1A
chr9	119176876;119177487	119177422;119177647	+	119176876	119177647	cassetteExon	0.5	100	100	ENSMUST00000039784.12	ENSMUSG00000036138.17	Acaa1a	chr9	protein_coding	acetyl-Coenzyme A acyltransferase 1A
chr9	119176876	119177652	+	119176876	119177647	A3SS	0.33	50	50	ENSMUST00000039784.12	ENSMUSG00000036138.17	Acaa1a	chr9	protein_coding	acetyl-Coenzyme A acyltransferase 1A
chr9	119176876	119177652	+	119176876	119177422	A3SS&ES	0.33	50	50	ENSMUST00000176796.8	ENSMUSG00000036138.17	Acaa1a	chr9	protein_coding	acetyl-Coenzyme A acyltransferase 1A
chr9	119173574	119176796	+	119175634	119176796	A5SS	0.5	50	50	ENSMUST00000176796.8	ENSMUSG00000036138.17	Acaa1a	chr9	protein_coding	acetyl-Coenzyme A acyltransferase 1A
chr9	119177837;119178475	119178420;119178558	+	119177837;119178166	119177987;119178558	MXE	0.5	100	100	ENSMUST00000175743.8	ENSMUSG00000036138.17	Acaa1a	chr9	protein_coding	acetyl-Coenzyme A acyltransferase 1A
chr9	119177837	119178420	+	119177837	119177987	3pMXE	0.5	50	50	ENSMUST00000175719.2	ENSMUSG00000036138.17	Acaa1a	chr9	protein_coding	acetyl-Coenzyme A acyltransferase 1A
chr9	119188380	119193563	+	119188380;119190249	119190180;119193563	ES	0.5	50	50	ENSMUST00000039610.10	ENSMUSG00000035769.10	Xylb	chr9	protein_coding	xylulokinase homolog (H. influenzae)
chr9	119190249	119190403	+	119190249	119193563	A3SS	0.5	50	50	ENSMUST00000039610.10	ENSMUSG00000035769.10	Xylb	chr9	protein_coding	xylulokinase homolog (H. influenzae)
chr9	119198751	119199345	+	119198751	119200982	A3SS	0.5	50	50	ENSMUST00000039610.10	ENSMUSG00000035769.10	Xylb	chr9	protein_coding	xylulokinase homolog (H. influenzae)
chr9	119200475	119200982	+	119198751	119200982	A5SS	0.5	50	50	ENSMUST00000039610.10	ENSMUSG00000035769.10	Xylb	chr9	protein_coding	xylulokinase homolog (H. influenzae)
chr9	119257142	119257291	+	119257142	119257267	A3SS	0.5	50	50	ENSMUST00000165044.3	ENSMUSG00000061393.15	Acvr2b	chr9	protein_coding	activin receptor IIB
chr9	119276164	119278844	+	119276164;119277594	119277455;119278844	ES	0.5	50	50	ENSMUST00000035094.14	ENSMUSG00000042787.16	Exog	chr9	protein_coding	endo/exonuclease (5'-3'), endonuclease G-like
chr9	119274216;119274387	119274353;119276015	+	119274216	119276015	cassetteExon	0.5	100	100	ENSMUST00000035094.14	ENSMUSG00000042787.16	Exog	chr9	protein_coding	endo/exonuclease (5'-3'), endonuclease G-like
chr9	119274216;119274867	119274754;119276015	+	119274216	119276015	cassetteExon	0.5	100	100	ENSMUST00000035094.14	ENSMUSG00000042787.16	Exog	chr9	protein_coding	endo/exonuclease (5'-3'), endonuclease G-like
chr9	119274216;119274867	119274754;119276015	+	119274216;119274387	119274353;119276015	MXE	0.5	100	100	ENSMUST00000164213.5	ENSMUSG00000042787.16	Exog	chr9	protein_coding	endo/exonuclease (5'-3'), endonuclease G-like
chr9	119368820;119372481	119372390;119379672	-	119368820;119372256	119372165;119379672	MXE	0.5	100	100	ENSMUST00000065196.13	ENSMUSG00000032511.18	Scn5a	chr9	protein_coding	sodium channel, voltage-gated, type V, alpha
chr9	119345127	119346414	-	119345130	119346414	A3SS	0.5	50	50	ENSMUST00000065196.13	ENSMUSG00000032511.18	Scn5a	chr9	protein_coding	sodium channel, voltage-gated, type V, alpha
chr9	119391744	119392353	-	119391744	119407915	A5SS	0.5	50	50	ENSMUST00000117911.8	ENSMUSG00000032511.18	Scn5a	chr9	protein_coding	sodium channel, voltage-gated, type V, alpha
chr9	119462944	119464509	-	119462947	119464509	A3SS	0.5	50	50	ENSMUST00000084787.6	ENSMUSG00000034533.11	Scn10a	chr9	protein_coding	sodium channel, voltage-gated, type X, alpha
chr9	119649081	119654491	-	119649081	119652837	5pMXE	0.5	50	50	ENSMUST00000215718.2	ENSMUSG00000034115.11	Scn11a	chr9	protein_coding	sodium channel, voltage-gated, type XI, alpha
chr9	119724382	119731352	+	119724023	119731352	A5SS	0.5	50	50	ENSMUST00000036561.8	ENSMUSG00000032512.8	Wdr48	chr9	protein_coding	WD repeat domain 48
chr9	119745857	119746177	+	119745899	119746177	A5SS	0.5	50	50	ENSMUST00000036561.8	ENSMUSG00000032512.8	Wdr48	chr9	protein_coding	WD repeat domain 48
chr9	119750689	119751684	+	119749710	119751684	A5SS	0.5	50	50	ENSMUST00000036561.8	ENSMUSG00000032512.8	Wdr48	chr9	protein_coding	WD repeat domain 48
chr9	119774647	119779667	+	119774647;119775877	119775685;119779667	ES	0.5	50	50	ENSMUST00000035100.6	ENSMUSG00000032514.12	Ttc21a	chr9	protein_coding	tetratricopeptide repeat domain 21A
chr9	119781350;119782000	119781939;119783222	+	119781350	119783222	cassetteExon	0.5	100	100	ENSMUST00000035100.6	ENSMUSG00000032514.12	Ttc21a	chr9	protein_coding	tetratricopeptide repeat domain 21A
chr9	119770247	119771638	+	119770365	119771638	A5SS	0.5	50	50	ENSMUST00000035100.6	ENSMUSG00000032514.12	Ttc21a	chr9	protein_coding	tetratricopeptide repeat domain 21A
chr9	119806311	119813700	-	119806311	119813472	5pMXE	0.25	50	50	ENSMUST00000035101.9	ENSMUSG00000032515.9	Csrnp1	chr9	protein_coding	cysteine-serine-rich nuclear protein 1
chr9	119806311	119811799	-	119806311	119813472	A5SS	0.25	50	50	ENSMUST00000035101.9	ENSMUSG00000032515.9	Csrnp1	chr9	protein_coding	cysteine-serine-rich nuclear protein 1
chr9	119806311	119812685	-	119806311	119813472	A5SS	0.25	50	50	ENSMUST00000035101.9	ENSMUSG00000032515.9	Csrnp1	chr9	protein_coding	cysteine-serine-rich nuclear protein 1
chr9	119806311	119812685	-	119806311	119811799	5pMXE	0.25	50	50	ENSMUST00000214058.2	ENSMUSG00000032515.9	Csrnp1	chr9	protein_coding	cysteine-serine-rich nuclear protein 1
chr9	119806311	119813700	-	119806311	119811799	5pMXE	0.25	50	50	ENSMUST00000214058.2	ENSMUSG00000032515.9	Csrnp1	chr9	protein_coding	cysteine-serine-rich nuclear protein 1
chr9	119806311	119812685	-	119806311	119813700	A5SS	0.25	50	50	ENSMUST00000213936.2	ENSMUSG00000032515.9	Csrnp1	chr9	protein_coding	cysteine-serine-rich nuclear protein 1
chr9	119939638	119946519	+	119939638;119945689	119945568;119946519	ES	0.5	50	50	ENSMUST00000035106.12	ENSMUSG00000032519.12	Slc25a38	chr9	protein_coding	solute carrier family 25, member 38
chr9	119946603;119949021	119948949;119949323	+	119946603	119949323	cassetteExon	0.5	100	100	ENSMUST00000035106.12	ENSMUSG00000032519.12	Slc25a38	chr9	protein_coding	solute carrier family 25, member 38
chr9	119946603;119949071	119948949;119949323	+	119946603	119949323	cassetteExon	0.5	100	100	ENSMUST00000035106.12	ENSMUSG00000032519.12	Slc25a38	chr9	protein_coding	solute carrier family 25, member 38
chr9	119939638	119940409	+	119939638	119945568	A3SS	0.33	50	50	ENSMUST00000035106.12	ENSMUSG00000032519.12	Slc25a38	chr9	protein_coding	solute carrier family 25, member 38
chr9	119944242	119945568	+	119939638	119945568	A5SS	0.5	50	50	ENSMUST00000035106.12	ENSMUSG00000032519.12	Slc25a38	chr9	protein_coding	solute carrier family 25, member 38
chr9	119949021	119949323	+	119949071	119949323	A5SS	0.33	50	50	ENSMUST00000150093.8	ENSMUSG00000032519.12	Slc25a38	chr9	protein_coding	solute carrier family 25, member 38
chr9	119939638	119946519	+	119939638	119940409	3pMXE	0.33	50	50	ENSMUST00000139079.8	ENSMUSG00000032519.12	Slc25a38	chr9	protein_coding	solute carrier family 25, member 38
chr9	119946603	119949323	+	119946603	119948949	A3SS	0.5	50	50	ENSMUST00000137522.8	ENSMUSG00000032519.12	Slc25a38	chr9	protein_coding	solute carrier family 25, member 38
chr9	119958342	119959111	+	119958342	119959184	A3SS	0.5	50	50	ENSMUST00000035105.7	ENSMUSG00000032518.7	Rpsa	chr9	protein_coding	ribosomal protein SA
chr9	119959429	119959875	+	119959429	119959834	A3SS	0.5	50	50	ENSMUST00000035105.7	ENSMUSG00000032518.7	Rpsa	chr9	protein_coding	ribosomal protein SA
chr9	119963229	119963865	-	119963229	119964374	A5SS	0.5	50	50	ENSMUST00000214963.2	ENSMUSG00000111028.2	Gm5922	chr9	lncRNA	predicted gene 5922
chr9	119978863	119996867	+	119978863;119983831	119983753;119996867	ES	0.5	50	50	ENSMUST00000068698.15	ENSMUSG00000032517.17	Mobp	chr9	protein_coding	myelin-associated oligodendrocytic basic protein
chr9	119997076	120002217	+	119997076	119997289	3pMXE	0.5	50	50	ENSMUST00000068698.15	ENSMUSG00000032517.17	Mobp	chr9	protein_coding	myelin-associated oligodendrocytic basic protein
chr9	119982193	119983753	+	119978863	119983753	A5SS	0.5	50	50	ENSMUST00000068698.15	ENSMUSG00000032517.17	Mobp	chr9	protein_coding	myelin-associated oligodendrocytic basic protein
chr9	120008471	120065709	+	120008471	120008591	3pMXE	0.5	50	50	ENSMUST00000174193.8	ENSMUSG00000032517.17	Mobp	chr9	protein_coding	myelin-associated oligodendrocytic basic protein
chr9	120065852	120085762	+	120065852	120108059	A3SS	0.5	50	50	ENSMUST00000216004.2	ENSMUSG00000111219.2	Gm38642	chr9	lncRNA	predicted gene, 38642
chr9	120022187	120065709	+	120008471	120065709	A5SS	0.5	50	50	ENSMUST00000216004.2	ENSMUSG00000111219.2	Gm38642	chr9	lncRNA	predicted gene, 38642
chr9	120133266	120164664	+	120130675	120164664	A5SS	0.5	50	50	ENSMUST00000133173.3	ENSMUSG00000041794.14	Myrip	chr9	protein_coding	myosin VIIA and Rab interacting protein
chr9	120215471	120217178	+	120164806	120217178	A5SS	0.5	50	50	ENSMUST00000133173.3	ENSMUSG00000041794.14	Myrip	chr9	protein_coding	myosin VIIA and Rab interacting protein
chr9	120239283	120246206	+	120217399	120246206	A5SS	0.5	50	50	ENSMUST00000133173.3	ENSMUSG00000041794.14	Myrip	chr9	protein_coding	myosin VIIA and Rab interacting protein
chr9	120401263	120402642	+	120401263;120401928	120401834;120402642	ES	0.5	50	50	ENSMUST00000165532.3	ENSMUSG00000025794.10	Rpl14	chr9	protein_coding	ribosomal protein L14
chr9	120400983	120401162	+	120400607	120401162	A5SS	0.5	50	50	ENSMUST00000165532.3	ENSMUSG00000025794.10	Rpl14	chr9	protein_coding	ribosomal protein L14
chr9	120441532	120443680	-	120441532	120445130	A5SS	0.5	50	50	ENSMUST00000214759.2	ENSMUSG00000110760.2	Gm39456	chr9	lncRNA	predicted gene, 39456
chr9	120621159	120622949	+	120621270	120622949	A5SS	0.5	50	50	ENSMUST00000216419.2	ENSMUSG00000111270.2	Gm47066	chr9	lncRNA	predicted gene, 47066
chr9	120753762;120757568	120757418;120759436	-	120753762	120759436	cassetteExon	0.5	100	100	ENSMUST00000140589.3	ENSMUSG00000086365.3	4930593C16Rik	chr9	lncRNA	RIKEN cDNA 4930593C16 gene
chr9	120762682	120779239	+	120759209	120779239	A5SS	0.25	50	50	ENSMUST00000130466.8	ENSMUSG00000006932.18	Ctnnb1	chr9	protein_coding	catenin (cadherin associated protein), beta 1
chr9	120762704	120779239	+	120759209	120779239	A5SS	0.25	50	50	ENSMUST00000130466.8	ENSMUSG00000006932.18	Ctnnb1	chr9	protein_coding	catenin (cadherin associated protein), beta 1
chr9	120763027	120779239	+	120759209	120779239	A5SS	0.25	50	50	ENSMUST00000130466.8	ENSMUSG00000006932.18	Ctnnb1	chr9	protein_coding	catenin (cadherin associated protein), beta 1
chr9	120779815	120780088	+	120779815	120779960	A3SS	0.5	50	50	ENSMUST00000007130.15	ENSMUSG00000006932.18	Ctnnb1	chr9	protein_coding	catenin (cadherin associated protein), beta 1
chr9	120762682	120779239	+	120762704	120779239	A5SS	0.25	50	50	ENSMUST00000007130.15	ENSMUSG00000006932.18	Ctnnb1	chr9	protein_coding	catenin (cadherin associated protein), beta 1
chr9	120763027	120779239	+	120762704	120779239	A5SS	0.25	50	50	ENSMUST00000007130.15	ENSMUSG00000006932.18	Ctnnb1	chr9	protein_coding	catenin (cadherin associated protein), beta 1
chr9	120785035	120786173	+	120785038	120786173	A5SS	0.5	50	50	ENSMUST00000007130.15	ENSMUSG00000006932.18	Ctnnb1	chr9	protein_coding	catenin (cadherin associated protein), beta 1
chr9	120763027	120779239	+	120762682	120779239	A5SS	0.25	50	50	ENSMUST00000178812.9	ENSMUSG00000006932.18	Ctnnb1	chr9	protein_coding	catenin (cadherin associated protein), beta 1
chr9	120932718	120955516	-	120932718	120936738	5pMXE	0.33	50	50	ENSMUST00000170406.8	ENSMUSG00000040936.16	Ulk4	chr9	protein_coding	unc-51-like kinase 4
chr9	120793674	120795463	-	120792096	120795463	A3SS	0.5	50	50	ENSMUST00000170406.8	ENSMUSG00000040936.16	Ulk4	chr9	protein_coding	unc-51-like kinase 4
chr9	120795588	120873752	-	120795548	120873752	A3SS	0.5	50	50	ENSMUST00000170406.8	ENSMUSG00000040936.16	Ulk4	chr9	protein_coding	unc-51-like kinase 4
chr9	120932718	120937356	-	120932718	120936738	A5SS	0.33	50	50	ENSMUST00000170406.8	ENSMUSG00000040936.16	Ulk4	chr9	protein_coding	unc-51-like kinase 4
chr9	120986353	120997250	-	120986353;120989469	120989336;120997250	ES	0.5	50	50	ENSMUST00000171923.8	ENSMUSG00000040936.16	Ulk4	chr9	protein_coding	unc-51-like kinase 4
chr9	120932718;120937542	120937356;120955516	-	120932718	120955516	cassetteExon	0.5	100	100	ENSMUST00000171923.8	ENSMUSG00000040936.16	Ulk4	chr9	protein_coding	unc-51-like kinase 4
chr9	121073510;121075977	121075949;121077991	-	121073510	121077991	cassetteExon	0.5	100	100	ENSMUST00000171923.8	ENSMUSG00000040936.16	Ulk4	chr9	protein_coding	unc-51-like kinase 4
chr9	121095679;121101264	121100979;121101939	-	121095679	121101939	cassetteExon	0.5	100	100	ENSMUST00000171923.8	ENSMUSG00000040936.16	Ulk4	chr9	protein_coding	unc-51-like kinase 4
chr9	121086487	121087795	-	121086484	121087795	A3SS	0.5	50	50	ENSMUST00000171923.8	ENSMUSG00000040936.16	Ulk4	chr9	protein_coding	unc-51-like kinase 4
chr9	120974452	120985906	-	120974452	120981156	A5SS&ES	0.5	50	50	ENSMUST00000171923.8	ENSMUSG00000040936.16	Ulk4	chr9	protein_coding	unc-51-like kinase 4
chr9	121021861	121022079	-	121021861	121033790	A5SS	0.5	50	50	ENSMUST00000171923.8	ENSMUSG00000040936.16	Ulk4	chr9	protein_coding	unc-51-like kinase 4
chr9	121081779	121084148	-	121081779	121084183	A5SS	0.5	50	50	ENSMUST00000171923.8	ENSMUSG00000040936.16	Ulk4	chr9	protein_coding	unc-51-like kinase 4
chr9	120986353	120997250	-	120989469	120997250	3pMXE	0.5	50	50	ENSMUST00000164969.2	ENSMUSG00000040936.16	Ulk4	chr9	protein_coding	unc-51-like kinase 4
chr9	121289643	121298051	+	121289643;121296043	121295973;121298051	ES	0.5	50	50	ENSMUST00000211301.2	ENSMUSG00000032536.13	Trak1	chr9	protein_coding	trafficking protein, kinesin binding 1
chr9	121298153;121299386	121299294;121301303	+	121298153	121301303	cassetteExon	0.5	100	100	ENSMUST00000211301.2	ENSMUSG00000032536.13	Trak1	chr9	protein_coding	trafficking protein, kinesin binding 1
chr9	121221117	121229302	+	121221117	121260545	A3SS	0.5	50	50	ENSMUST00000211301.2	ENSMUSG00000032536.13	Trak1	chr9	protein_coding	trafficking protein, kinesin binding 1
chr9	121127138	121193067	+	121126899	121193067	A5SS	0.33	50	50	ENSMUST00000211301.2	ENSMUSG00000032536.13	Trak1	chr9	protein_coding	trafficking protein, kinesin binding 1
chr9	121143425	121193067	+	121126899	121193067	A5SS	0.33	50	50	ENSMUST00000211301.2	ENSMUSG00000032536.13	Trak1	chr9	protein_coding	trafficking protein, kinesin binding 1
chr9	121196257	121220923	+	121193365	121220923	A5SS	0.25	50	50	ENSMUST00000211301.2	ENSMUSG00000032536.13	Trak1	chr9	protein_coding	trafficking protein, kinesin binding 1
chr9	121196300	121220923	+	121193365	121220923	A5SS	0.25	50	50	ENSMUST00000211301.2	ENSMUSG00000032536.13	Trak1	chr9	protein_coding	trafficking protein, kinesin binding 1
chr9	121211998	121220923	+	121193365	121220923	A5SS	0.25	50	50	ENSMUST00000211301.2	ENSMUSG00000032536.13	Trak1	chr9	protein_coding	trafficking protein, kinesin binding 1
chr9	121232870	121260545	+	121221117	121260545	A5SS	0.33	50	50	ENSMUST00000211301.2	ENSMUSG00000032536.13	Trak1	chr9	protein_coding	trafficking protein, kinesin binding 1
chr9	121245379	121260545	+	121221117	121260545	A5SS	0.33	50	50	ENSMUST00000211301.2	ENSMUSG00000032536.13	Trak1	chr9	protein_coding	trafficking protein, kinesin binding 1
chr9	121289781	121301303	+	121298153	121301303	A5SS&ES	0.33	50	50	ENSMUST00000211301.2	ENSMUSG00000032536.13	Trak1	chr9	protein_coding	trafficking protein, kinesin binding 1
chr9	121289781	121301303	+	121299386	121301303	A5SS&ES	0.33	50	50	ENSMUST00000210798.3	ENSMUSG00000032536.13	Trak1	chr9	protein_coding	trafficking protein, kinesin binding 1
chr9	121143425	121193067	+	121127138	121193067	A5SS	0.33	50	50	ENSMUST00000209390.2	ENSMUSG00000032536.13	Trak1	chr9	protein_coding	trafficking protein, kinesin binding 1
chr9	121196300	121220923	+	121196257	121220923	A5SS	0.25	50	50	ENSMUST00000210636.2	ENSMUSG00000032536.13	Trak1	chr9	protein_coding	trafficking protein, kinesin binding 1
chr9	121211998	121220923	+	121196257	121220923	A5SS	0.25	50	50	ENSMUST00000210636.2	ENSMUSG00000032536.13	Trak1	chr9	protein_coding	trafficking protein, kinesin binding 1
chr9	121211998	121220923	+	121196300	121220923	A5SS	0.25	50	50	ENSMUST00000209211.2	ENSMUSG00000032536.13	Trak1	chr9	protein_coding	trafficking protein, kinesin binding 1
chr9	121245379	121260545	+	121232870	121260545	A5SS	0.33	50	50	ENSMUST00000210351.2	ENSMUSG00000032536.13	Trak1	chr9	protein_coding	trafficking protein, kinesin binding 1
chr9	121319267	121323383	-	121319267	121322531	5pMXE	0.33	50	50	ENSMUST00000216176.2	ENSMUSG00000032532.8	Cck	chr9	protein_coding	cholecystokinin
chr9	121319267	121322435	-	121319267	121322531	A5SS	0.33	50	50	ENSMUST00000216176.2	ENSMUSG00000032532.8	Cck	chr9	protein_coding	cholecystokinin
chr9	121319267	121323383	-	121319267;121322597	121322435;121323383	ES	0.33	50	50	ENSMUST00000216138.2	ENSMUSG00000032532.8	Cck	chr9	protein_coding	cholecystokinin
chr9	121322720	121323383	-	121322597	121323383	A3SS	0.33	50	50	ENSMUST00000216138.2	ENSMUSG00000032532.8	Cck	chr9	protein_coding	cholecystokinin
chr9	121323598	121323800	-	121323598	121324664	A5SS	0.5	50	50	ENSMUST00000216138.2	ENSMUSG00000032532.8	Cck	chr9	protein_coding	cholecystokinin
chr9	121319267;121322597	121322531;121323383	-	121319267	121323383	cassetteExon	0.5	100	100	ENSMUST00000035120.6	ENSMUSG00000032532.8	Cck	chr9	protein_coding	cholecystokinin
chr9	121319267;121322720	121322435;121323383	-	121319267	121323383	cassetteExon	0.5	100	100	ENSMUST00000035120.6	ENSMUSG00000032532.8	Cck	chr9	protein_coding	cholecystokinin
chr9	121319267;121322720	121322531;121323383	-	121319267	121323383	cassetteExon	0.5	100	100	ENSMUST00000035120.6	ENSMUSG00000032532.8	Cck	chr9	protein_coding	cholecystokinin
chr9	121413649	121470556	-	121413649;121416056	121415869;121470556	ES	0.33	50	50	ENSMUST00000077706.10	ENSMUSG00000032530.15	Lyzl4	chr9	protein_coding	lysozyme-like 4
chr9	121413649;121465777	121465721;121470556	-	121413649;121416056	121415869;121470556	MXE	0.5	100	100	ENSMUST00000077706.10	ENSMUSG00000032530.15	Lyzl4	chr9	protein_coding	lysozyme-like 4
chr9	121413649	121415759	-	121413649	121415869	A5SS	0.25	50	50	ENSMUST00000077706.10	ENSMUSG00000032530.15	Lyzl4	chr9	protein_coding	lysozyme-like 4
chr9	121413649	121415759	-	121413649	121470929	A5SS	0.2	50	50	ENSMUST00000120918.8	ENSMUSG00000032530.15	Lyzl4	chr9	protein_coding	lysozyme-like 4
chr9	121413649	121415869	-	121413649	121470929	A5SS	0.2	50	50	ENSMUST00000120918.8	ENSMUSG00000032530.15	Lyzl4	chr9	protein_coding	lysozyme-like 4
chr9	121413649	121465721	-	121413649	121470929	A5SS	0.2	50	50	ENSMUST00000120918.8	ENSMUSG00000032530.15	Lyzl4	chr9	protein_coding	lysozyme-like 4
chr9	121413649	121470556	-	121413649	121470929	A5SS	0.2	50	50	ENSMUST00000120918.8	ENSMUSG00000032530.15	Lyzl4	chr9	protein_coding	lysozyme-like 4
chr9	121413649	121470556	-	121413649;121416056	121415759;121470556	ES	0.33	50	50	ENSMUST00000213757.2	ENSMUSG00000032530.15	Lyzl4	chr9	protein_coding	lysozyme-like 4
chr9	121413649;121465777	121465721;121470556	-	121413649;121416056	121415759;121470556	MXE	0.5	100	100	ENSMUST00000213757.2	ENSMUSG00000032530.15	Lyzl4	chr9	protein_coding	lysozyme-like 4
chr9	121413649	121470556	-	121413649;121465777	121465721;121470556	ES	0.33	50	50	ENSMUST00000125075.2	ENSMUSG00000032530.15	Lyzl4	chr9	protein_coding	lysozyme-like 4
chr9	121432011	121443030	+	121432011	121432983	3pMXE	0.5	50	50	ENSMUST00000128080.8	ENSMUSG00000084995.9	Lyzl4os	chr9	lncRNA	lysozyme-like 4, opposite strand
chr9	121432015	121432983	+	121432011	121432983	A5SS	0.5	50	50	ENSMUST00000128080.8	ENSMUSG00000084995.9	Lyzl4os	chr9	lncRNA	lysozyme-like 4, opposite strand
chr9	121482970	121486434	+	121482970	121487113	A3SS	0.5	50	50	ENSMUST00000035115.5	ENSMUSG00000032528.6	Vipr1	chr9	protein_coding	vasoactive intestinal peptide receptor 1
chr9	121472255	121482865	+	121471992	121482865	A5SS	0.5	50	50	ENSMUST00000035115.5	ENSMUSG00000032528.6	Vipr1	chr9	protein_coding	vasoactive intestinal peptide receptor 1
chr9	121519481	121524600	-	121519481;121522139	121521976;121524600	ES	0.5	50	50	ENSMUST00000078547.12	ENSMUSG00000061536.14	Sec22c	chr9	protein_coding	SEC22 homolog C, vesicle trafficking protein
chr9	121524808	121533990	-	121524808;121529743	121529619;121533990	ES	0.5	50	50	ENSMUST00000078547.12	ENSMUSG00000061536.14	Sec22c	chr9	protein_coding	SEC22 homolog C, vesicle trafficking protein
chr9	121529743	121534280	-	121529743	121533990	5pMXE	0.5	50	50	ENSMUST00000078547.12	ENSMUSG00000061536.14	Sec22c	chr9	protein_coding	SEC22 homolog C, vesicle trafficking protein
chr9	121513901	121514589	-	121513924	121514589	A3SS	0.5	50	50	ENSMUST00000078547.12	ENSMUSG00000061536.14	Sec22c	chr9	protein_coding	SEC22 homolog C, vesicle trafficking protein
chr9	121524808	121534280	-	121524808	121533990	5pMXE	0.33	50	50	ENSMUST00000111560.10	ENSMUSG00000061536.14	Sec22c	chr9	protein_coding	SEC22 homolog C, vesicle trafficking protein
chr9	121519481	121524600	-	121519481	121521976	5pMXE	0.5	50	50	ENSMUST00000215056.2	ENSMUSG00000061536.14	Sec22c	chr9	protein_coding	SEC22 homolog C, vesicle trafficking protein
chr9	121524808;121529743	121529619;121534280	-	121524808	121534280	cassetteExon	0.5	100	100	ENSMUST00000154978.3	ENSMUSG00000061536.14	Sec22c	chr9	protein_coding	SEC22 homolog C, vesicle trafficking protein
chr9	121524808	121534280	-	121529743	121534280	3pMXE	0.5	50	50	ENSMUST00000214595.2	ENSMUSG00000061536.14	Sec22c	chr9	protein_coding	SEC22 homolog C, vesicle trafficking protein
chr9	121539781	121541669	+	121539781	121541631	A3SS	0.5	50	50	ENSMUST00000035113.11	ENSMUSG00000032526.12	Ss18l2	chr9	protein_coding	SS18, nBAF chromatin remodeling complex subunit like 2
chr9	121539513	121539705	+	121539537	121539705	A5SS	0.5	50	50	ENSMUST00000035113.11	ENSMUSG00000032526.12	Ss18l2	chr9	protein_coding	SS18, nBAF chromatin remodeling complex subunit like 2
chr9	121556456	121558702	+	121556456;121557751	121557644;121558702	ES	0.5	50	50	ENSMUST00000183070.8	ENSMUSG00000032525.16	Nktr	chr9	protein_coding	natural killer tumor recognition sequence
chr9	121558746	121560544	+	121558746;121559090	121559063;121560544	ES	0.5	50	50	ENSMUST00000183070.8	ENSMUSG00000032525.16	Nktr	chr9	protein_coding	natural killer tumor recognition sequence
chr9	121560631	121570188	+	121560631;121569141	121567454;121570188	ES	0.33	50	50	ENSMUST00000183070.8	ENSMUSG00000032525.16	Nktr	chr9	protein_coding	natural killer tumor recognition sequence
chr9	121548611;121549078	121548920;121556382	+	121548611	121556382	cassetteExon	0.5	100	100	ENSMUST00000183070.8	ENSMUSG00000032525.16	Nktr	chr9	protein_coding	natural killer tumor recognition sequence
chr9	121570809	121571706	+	121570809	121571631	A3SS	0.5	50	50	ENSMUST00000183070.8	ENSMUSG00000032525.16	Nktr	chr9	protein_coding	natural killer tumor recognition sequence
chr9	121548385	121548525	+	121548361	121548525	A5SS	0.5	50	50	ENSMUST00000183070.8	ENSMUSG00000032525.16	Nktr	chr9	protein_coding	natural killer tumor recognition sequence
chr9	121567481	121570188	+	121569141	121570188	A5SS	0.33	50	50	ENSMUST00000183070.8	ENSMUSG00000032525.16	Nktr	chr9	protein_coding	natural killer tumor recognition sequence
chr9	121580828	121582057	+	121580828;121581529	121581473;121582057	ES	0.33	50	50	ENSMUST00000035112.13	ENSMUSG00000032525.16	Nktr	chr9	protein_coding	natural killer tumor recognition sequence
chr9	121560631;121567481	121567454;121570188	+	121560631	121570188	cassetteExon	0.5	100	100	ENSMUST00000035112.13	ENSMUSG00000032525.16	Nktr	chr9	protein_coding	natural killer tumor recognition sequence
chr9	121581529;121581893	121581863;121582057	+	121581529	121582057	cassetteExon	0.5	100	100	ENSMUST00000035112.13	ENSMUSG00000032525.16	Nktr	chr9	protein_coding	natural killer tumor recognition sequence
chr9	121569141	121570188	+	121560631	121570188	A5SS	0.33	50	50	ENSMUST00000035112.13	ENSMUSG00000032525.16	Nktr	chr9	protein_coding	natural killer tumor recognition sequence
chr9	121558746	121560544	+	121558746	121559063	A3SS	0.5	50	50	ENSMUST00000182904.9	ENSMUSG00000032525.16	Nktr	chr9	protein_coding	natural killer tumor recognition sequence
chr9	121548611	121556382	+	121548611	121548920	3pMXE	0.5	50	50	ENSMUST00000183207.2	ENSMUSG00000032525.16	Nktr	chr9	protein_coding	natural killer tumor recognition sequence
chr9	121548611	121556382	+	121549078	121556382	5pMXE	0.5	50	50	ENSMUST00000182337.2	ENSMUSG00000032525.16	Nktr	chr9	protein_coding	natural killer tumor recognition sequence
chr9	121580828	121582057	+	121580828	121581473	3pMXE	0.5	50	50	ENSMUST00000213351.2	ENSMUSG00000032525.16	Nktr	chr9	protein_coding	natural killer tumor recognition sequence
chr9	121580828;121581893	121581473;121582057	+	121580828	121582057	cassetteExon	0.5	100	100	ENSMUST00000182713.2	ENSMUSG00000032525.16	Nktr	chr9	protein_coding	natural killer tumor recognition sequence
chr9	121594696	121595533	+	121594696;121595063	121595011;121595533	ES	0.5	50	50	ENSMUST00000214732.2	ENSMUSG00000013419.8	Zfp651	chr9	protein_coding	zinc finger protein 651
chr9	121589291	121591685	+	121588504	121591685	A5SS	0.5	50	50	ENSMUST00000214732.2	ENSMUSG00000013419.8	Zfp651	chr9	protein_coding	zinc finger protein 651
chr9	121619827	121619961	-	121619827	121621329	A5SS	0.16	50	50	ENSMUST00000035110.11	ENSMUSG00000032523.12	Hhatl	chr9	protein_coding	hedgehog acyltransferase-like
chr9	121619827	121619969	-	121619827	121621329	A5SS	0.16	50	50	ENSMUST00000035110.11	ENSMUSG00000032523.12	Hhatl	chr9	protein_coding	hedgehog acyltransferase-like
chr9	121619827	121620062	-	121619827	121621329	A5SS	0.16	50	50	ENSMUST00000035110.11	ENSMUSG00000032523.12	Hhatl	chr9	protein_coding	hedgehog acyltransferase-like
chr9	121619827	121620245	-	121619827	121621329	A5SS	0.16	50	50	ENSMUST00000035110.11	ENSMUSG00000032523.12	Hhatl	chr9	protein_coding	hedgehog acyltransferase-like
chr9	121619827	121620560	-	121619827	121621329	A5SS	0.16	50	50	ENSMUST00000035110.11	ENSMUSG00000032523.12	Hhatl	chr9	protein_coding	hedgehog acyltransferase-like
chr9	121619827	121620245	-	121619827	121620062	5pMXE	0.16	50	50	ENSMUST00000163981.3	ENSMUSG00000032523.12	Hhatl	chr9	protein_coding	hedgehog acyltransferase-like
chr9	121619827	121620560	-	121619827	121620062	5pMXE	0.16	50	50	ENSMUST00000163981.3	ENSMUSG00000032523.12	Hhatl	chr9	protein_coding	hedgehog acyltransferase-like
chr9	121619827	121619961	-	121619827	121620062	A5SS	0.16	50	50	ENSMUST00000163981.3	ENSMUSG00000032523.12	Hhatl	chr9	protein_coding	hedgehog acyltransferase-like
chr9	121619827	121619969	-	121619827	121620062	A5SS	0.16	50	50	ENSMUST00000163981.3	ENSMUSG00000032523.12	Hhatl	chr9	protein_coding	hedgehog acyltransferase-like
chr9	121619827	121620560	-	121619827	121620245	5pMXE	0.16	50	50	ENSMUST00000214768.2	ENSMUSG00000032523.12	Hhatl	chr9	protein_coding	hedgehog acyltransferase-like
chr9	121619827	121619961	-	121619827	121620245	A5SS	0.16	50	50	ENSMUST00000214768.2	ENSMUSG00000032523.12	Hhatl	chr9	protein_coding	hedgehog acyltransferase-like
chr9	121619827	121619969	-	121619827	121620245	A5SS	0.16	50	50	ENSMUST00000214768.2	ENSMUSG00000032523.12	Hhatl	chr9	protein_coding	hedgehog acyltransferase-like
chr9	121619827	121620560	-	121619827	121619961	5pMXE	0.16	50	50	ENSMUST00000215910.2	ENSMUSG00000032523.12	Hhatl	chr9	protein_coding	hedgehog acyltransferase-like
chr9	121619827	121619969	-	121619827	121619961	A5SS	0.16	50	50	ENSMUST00000215910.2	ENSMUSG00000032523.12	Hhatl	chr9	protein_coding	hedgehog acyltransferase-like
chr9	121619827	121620560	-	121619827	121619969	5pMXE	0.16	50	50	ENSMUST00000215477.2	ENSMUSG00000032523.12	Hhatl	chr9	protein_coding	hedgehog acyltransferase-like
chr9	121628206	121637218	-	121628206;121629717	121629569;121637218	ES	0.5	50	50	ENSMUST00000135986.9	ENSMUSG00000079235.11	Ccdc13	chr9	protein_coding	coiled-coil domain containing 13
chr9	121637340	121639160	-	121637340;121638230	121638147;121639160	ES	0.5	50	50	ENSMUST00000135986.9	ENSMUSG00000079235.11	Ccdc13	chr9	protein_coding	coiled-coil domain containing 13
chr9	121646617	121648561	-	121645820	121648561	A3SS	0.5	50	50	ENSMUST00000135986.9	ENSMUSG00000079235.11	Ccdc13	chr9	protein_coding	coiled-coil domain containing 13
chr9	121681675;121685651	121685504;121686578	-	121681675	121686578	cassetteExon	0.5	100	100	ENSMUST00000215007.2	ENSMUSG00000038412.9	Higd1a	chr9	protein_coding	HIG1 domain family, member 1A
chr9	121681675;121685651	121685516;121686578	-	121681675	121686578	cassetteExon	0.5	100	100	ENSMUST00000215007.2	ENSMUSG00000038412.9	Higd1a	chr9	protein_coding	HIG1 domain family, member 1A
chr9	121681675;121685938	121685504;121686578	-	121681675	121686578	cassetteExon	0.5	100	100	ENSMUST00000215007.2	ENSMUSG00000038412.9	Higd1a	chr9	protein_coding	HIG1 domain family, member 1A
chr9	121681675;121685938	121685516;121686578	-	121681675	121686578	cassetteExon	0.5	100	100	ENSMUST00000215007.2	ENSMUSG00000038412.9	Higd1a	chr9	protein_coding	HIG1 domain family, member 1A
chr9	121681675;121685938	121685787;121686578	-	121681675	121686578	cassetteExon	0.5	100	100	ENSMUST00000215007.2	ENSMUSG00000038412.9	Higd1a	chr9	protein_coding	HIG1 domain family, member 1A
chr9	121681675;121685938	121685787;121686578	-	121681675;121685651	121685504;121686578	MXE	0.5	100	100	ENSMUST00000215300.2	ENSMUSG00000038412.9	Higd1a	chr9	protein_coding	HIG1 domain family, member 1A
chr9	121685651;121685938	121685787;121686578	-	121685651	121686578	cassetteExon	0.5	100	100	ENSMUST00000215300.2	ENSMUSG00000038412.9	Higd1a	chr9	protein_coding	HIG1 domain family, member 1A
chr9	121681675	121685516	-	121681675	121685504	A5SS	0.25	50	50	ENSMUST00000215300.2	ENSMUSG00000038412.9	Higd1a	chr9	protein_coding	HIG1 domain family, member 1A
chr9	121681675	121685516	-	121681671	121685516	A3SS	0.5	50	50	ENSMUST00000213124.2	ENSMUSG00000038412.9	Higd1a	chr9	protein_coding	HIG1 domain family, member 1A
chr9	121681675	121685787	-	121685651	121685787	A3SS&ES	0.5	50	50	ENSMUST00000213124.2	ENSMUSG00000038412.9	Higd1a	chr9	protein_coding	HIG1 domain family, member 1A
chr9	121681675	121686578	-	121685938	121686578	A3SS&ES	0.33	50	50	ENSMUST00000213124.2	ENSMUSG00000038412.9	Higd1a	chr9	protein_coding	HIG1 domain family, member 1A
chr9	121681675	121685787	-	121681675;121685651	121685516;121685787	ES	0.5	50	50	ENSMUST00000213147.2	ENSMUSG00000038412.9	Higd1a	chr9	protein_coding	HIG1 domain family, member 1A
chr9	121681675;121685651	121685504;121685787	-	121681675	121685787	cassetteExon	0.5	100	100	ENSMUST00000216914.2	ENSMUSG00000038412.9	Higd1a	chr9	protein_coding	HIG1 domain family, member 1A
chr9	121681675;121685651	121685516;121686578	-	121681675;121685938	121685787;121686578	MXE	0.5	100	100	ENSMUST00000216914.2	ENSMUSG00000038412.9	Higd1a	chr9	protein_coding	HIG1 domain family, member 1A
chr9	121681675	121685787	-	121681675	121685504	5pMXE	0.25	50	50	ENSMUST00000214988.2	ENSMUSG00000038412.9	Higd1a	chr9	protein_coding	HIG1 domain family, member 1A
chr9	121681675	121686578	-	121681675	121685504	5pMXE	0.25	50	50	ENSMUST00000214988.2	ENSMUSG00000038412.9	Higd1a	chr9	protein_coding	HIG1 domain family, member 1A
chr9	121727569	121735420	+	121727569;121731214	121731103;121735420	ES	0.33	50	50	ENSMUST00000214340.2	ENSMUSG00000044534.9	Ackr2	chr9	protein_coding	atypical chemokine receptor 2
chr9	121735251	121735420	+	121731214	121735420	A5SS	0.33	50	50	ENSMUST00000214340.2	ENSMUSG00000044534.9	Ackr2	chr9	protein_coding	atypical chemokine receptor 2
chr9	121735251	121735420	+	121727569	121735420	A5SS	0.33	50	50	ENSMUST00000050327.5	ENSMUSG00000044534.9	Ackr2	chr9	protein_coding	atypical chemokine receptor 2
chr9	121769876	121793803	+	121769876	121774677	3pMXE	0.33	50	50	ENSMUST00000214777.2	ENSMUSG00000043773.6	1700048O20Rik	chr9	lncRNA	RIKEN cDNA 1700048O20 gene
chr9	121769876	121770865	+	121769876	121774677	A3SS	0.33	50	50	ENSMUST00000214777.2	ENSMUSG00000043773.6	1700048O20Rik	chr9	lncRNA	RIKEN cDNA 1700048O20 gene
chr9	121769876	121793803	+	121769876	121770865	3pMXE	0.33	50	50	ENSMUST00000215356.2	ENSMUSG00000043773.6	1700048O20Rik	chr9	lncRNA	RIKEN cDNA 1700048O20 gene
chr9	121780213	121793803	+	121769876	121793803	A5SS	0.25	50	50	ENSMUST00000214808.2	ENSMUSG00000111053.2	Gm49343	chr9	lncRNA	predicted gene, 49343
chr9	121780314	121793803	+	121769876	121793803	A5SS	0.25	50	50	ENSMUST00000214808.2	ENSMUSG00000111053.2	Gm49343	chr9	lncRNA	predicted gene, 49343
chr9	121781946	121793803	+	121769876	121793803	A5SS	0.25	50	50	ENSMUST00000214808.2	ENSMUSG00000111053.2	Gm49343	chr9	lncRNA	predicted gene, 49343
chr9	121806698	121808188	+	121806698	121807288	A3SS	0.5	50	50	ENSMUST00000043011.9	ENSMUSG00000038233.11	Gask1a	chr9	protein_coding	golgi associated kinase 1A
chr9	121780314	121793803	+	121780213	121793803	A5SS	0.25	50	50	ENSMUST00000043011.9	ENSMUSG00000038233.11	Gask1a	chr9	protein_coding	golgi associated kinase 1A
chr9	121781946	121793803	+	121780213	121793803	A5SS	0.25	50	50	ENSMUST00000043011.9	ENSMUSG00000038233.11	Gask1a	chr9	protein_coding	golgi associated kinase 1A
chr9	121781946	121793803	+	121780314	121793803	A5SS	0.25	50	50	ENSMUST00000214536.3	ENSMUSG00000038233.11	Gask1a	chr9	protein_coding	golgi associated kinase 1A
chr9	121812889	121824942	-	121812889;121813222	121813166;121824942	ES	0.16	50	50	ENSMUST00000217610.2	ENSMUSG00000066235.8	Pomgnt2	chr9	protein_coding	protein O-linked mannose beta 1,4-N-acetylglucosaminyltransferase 2
chr9	121812889;121824179	121823911;121824942	-	121812889;121813222	121813166;121824942	MXE	0.5	100	100	ENSMUST00000217610.2	ENSMUSG00000066235.8	Pomgnt2	chr9	protein_coding	protein O-linked mannose beta 1,4-N-acetylglucosaminyltransferase 2
chr9	121812889;121824183	121823911;121824942	-	121812889;121813222	121813166;121824942	MXE	0.5	100	100	ENSMUST00000217610.2	ENSMUSG00000066235.8	Pomgnt2	chr9	protein_coding	protein O-linked mannose beta 1,4-N-acetylglucosaminyltransferase 2
chr9	121812867	121824942	-	121813222	121824942	A3SS&ES	0.16	50	50	ENSMUST00000217610.2	ENSMUSG00000066235.8	Pomgnt2	chr9	protein_coding	protein O-linked mannose beta 1,4-N-acetylglucosaminyltransferase 2
chr9	121814222	121824942	-	121813222	121824942	A3SS	0.16	50	50	ENSMUST00000217610.2	ENSMUSG00000066235.8	Pomgnt2	chr9	protein_coding	protein O-linked mannose beta 1,4-N-acetylglucosaminyltransferase 2
chr9	121812889	121825016	-	121812889	121813166	A5SS&ES	0.25	50	50	ENSMUST00000217610.2	ENSMUSG00000066235.8	Pomgnt2	chr9	protein_coding	protein O-linked mannose beta 1,4-N-acetylglucosaminyltransferase 2
chr9	121812889;121824179	121823911;121824942	-	121812889	121824942	cassetteExon	0.5	100	100	ENSMUST00000084743.7	ENSMUSG00000066235.8	Pomgnt2	chr9	protein_coding	protein O-linked mannose beta 1,4-N-acetylglucosaminyltransferase 2
chr9	121812889;121824183	121823911;121824942	-	121812889	121824942	cassetteExon	0.5	100	100	ENSMUST00000084743.7	ENSMUSG00000066235.8	Pomgnt2	chr9	protein_coding	protein O-linked mannose beta 1,4-N-acetylglucosaminyltransferase 2
chr9	121812867	121824942	-	121812889	121824942	A3SS	0.16	50	50	ENSMUST00000084743.7	ENSMUSG00000066235.8	Pomgnt2	chr9	protein_coding	protein O-linked mannose beta 1,4-N-acetylglucosaminyltransferase 2
chr9	121814222	121824942	-	121812889	121824942	A3SS	0.16	50	50	ENSMUST00000084743.7	ENSMUSG00000066235.8	Pomgnt2	chr9	protein_coding	protein O-linked mannose beta 1,4-N-acetylglucosaminyltransferase 2
chr9	121812889	121825016	-	121812889	121824942	A5SS	0.25	50	50	ENSMUST00000084743.7	ENSMUSG00000066235.8	Pomgnt2	chr9	protein_coding	protein O-linked mannose beta 1,4-N-acetylglucosaminyltransferase 2
chr9	121812867	121824942	-	121824183	121824942	A3SS&ES	0.16	50	50	ENSMUST00000216669.2	ENSMUSG00000066235.8	Pomgnt2	chr9	protein_coding	protein O-linked mannose beta 1,4-N-acetylglucosaminyltransferase 2
chr9	121814222	121824942	-	121824183	121824942	A3SS&ES	0.16	50	50	ENSMUST00000216669.2	ENSMUSG00000066235.8	Pomgnt2	chr9	protein_coding	protein O-linked mannose beta 1,4-N-acetylglucosaminyltransferase 2
chr9	121824179	121824942	-	121824183	121824942	A3SS	0.16	50	50	ENSMUST00000216669.2	ENSMUSG00000066235.8	Pomgnt2	chr9	protein_coding	protein O-linked mannose beta 1,4-N-acetylglucosaminyltransferase 2
chr9	121812889	121825016	-	121812889	121823911	A5SS&ES	0.25	50	50	ENSMUST00000216669.2	ENSMUSG00000066235.8	Pomgnt2	chr9	protein_coding	protein O-linked mannose beta 1,4-N-acetylglucosaminyltransferase 2
chr9	121814222	121824942	-	121812867	121824942	A3SS	0.16	50	50	ENSMUST00000214533.2	ENSMUSG00000066235.8	Pomgnt2	chr9	protein_coding	protein O-linked mannose beta 1,4-N-acetylglucosaminyltransferase 2
chr9	121824179	121824942	-	121812867	121824942	A3SS	0.16	50	50	ENSMUST00000214533.2	ENSMUSG00000066235.8	Pomgnt2	chr9	protein_coding	protein O-linked mannose beta 1,4-N-acetylglucosaminyltransferase 2
chr9	121814222	121824942	-	121824179	121824942	A3SS&ES	0.16	50	50	ENSMUST00000215084.2	ENSMUSG00000066235.8	Pomgnt2	chr9	protein_coding	protein O-linked mannose beta 1,4-N-acetylglucosaminyltransferase 2
chr9	121961008	121965972	+	121961008;121961816	121961694;121965972	ES	0.2	50	50	ENSMUST00000119215.9	ENSMUSG00000038145.18	Snrk	chr9	protein_coding	SNF related kinase
chr9	121961816;121963142	121963027;121965972	+	121961816	121965972	cassetteExon	0.5	100	100	ENSMUST00000119215.9	ENSMUSG00000038145.18	Snrk	chr9	protein_coding	SNF related kinase
chr9	121961816;121963142	121963053;121965972	+	121961816	121965972	cassetteExon	0.5	100	100	ENSMUST00000119215.9	ENSMUSG00000038145.18	Snrk	chr9	protein_coding	SNF related kinase
chr9	121946568	121965972	+	121961816	121965972	A5SS&ES	0.2	50	50	ENSMUST00000119215.9	ENSMUSG00000038145.18	Snrk	chr9	protein_coding	SNF related kinase
chr9	121947119	121960959	+	121946473	121960959	A5SS	0.5	50	50	ENSMUST00000119215.9	ENSMUSG00000038145.18	Snrk	chr9	protein_coding	SNF related kinase
chr9	121946568	121965972	+	121963142	121965972	A5SS&ES	0.2	50	50	ENSMUST00000146832.8	ENSMUSG00000038145.18	Snrk	chr9	protein_coding	SNF related kinase
chr9	121961816	121963027	+	121961772	121963027	A5SS	0.5	50	50	ENSMUST00000146832.8	ENSMUSG00000038145.18	Snrk	chr9	protein_coding	SNF related kinase
chr9	121961816	121965972	+	121963142	121965972	A5SS&ES	0.2	50	50	ENSMUST00000146832.8	ENSMUSG00000038145.18	Snrk	chr9	protein_coding	SNF related kinase
chr9	121946473	121965972	+	121946473;121961008	121960959;121965972	ES	0.2	50	50	ENSMUST00000118886.9	ENSMUSG00000038145.18	Snrk	chr9	protein_coding	SNF related kinase
chr9	121946568	121965972	+	121961008	121965972	A5SS&ES	0.2	50	50	ENSMUST00000118886.9	ENSMUSG00000038145.18	Snrk	chr9	protein_coding	SNF related kinase
chr9	121963142	121965972	+	121961008	121965972	A5SS	0.2	50	50	ENSMUST00000118886.9	ENSMUSG00000038145.18	Snrk	chr9	protein_coding	SNF related kinase
chr9	121946473	121986222	+	121946473;121966667	121965972;121986222	ES	0.5	50	50	ENSMUST00000120173.9	ENSMUSG00000038145.18	Snrk	chr9	protein_coding	SNF related kinase
chr9	121946568	121965972	+	121946473	121965972	A5SS	0.2	50	50	ENSMUST00000120173.9	ENSMUSG00000038145.18	Snrk	chr9	protein_coding	SNF related kinase
chr9	121961816	121965972	+	121946473	121965972	A5SS	0.2	50	50	ENSMUST00000120173.9	ENSMUSG00000038145.18	Snrk	chr9	protein_coding	SNF related kinase
chr9	121963142	121965972	+	121946473	121965972	A5SS	0.2	50	50	ENSMUST00000120173.9	ENSMUSG00000038145.18	Snrk	chr9	protein_coding	SNF related kinase
chr9	121946473	121960959	+	121946473	121986222	A3SS	0.33	50	50	ENSMUST00000217631.2	ENSMUSG00000038145.18	Snrk	chr9	protein_coding	SNF related kinase
chr9	121946473	121965972	+	121946473	121986222	A3SS	0.33	50	50	ENSMUST00000217631.2	ENSMUSG00000038145.18	Snrk	chr9	protein_coding	SNF related kinase
chr9	121966667	121986222	+	121946473	121986222	A5SS	0.5	50	50	ENSMUST00000217631.2	ENSMUSG00000038145.18	Snrk	chr9	protein_coding	SNF related kinase
chr9	121961816	121965972	+	121961816	121963027	3pMXE	0.33	50	50	ENSMUST00000215432.2	ENSMUSG00000038145.18	Snrk	chr9	protein_coding	SNF related kinase
chr9	121961816	121963053	+	121961816	121963027	A3SS	0.33	50	50	ENSMUST00000215432.2	ENSMUSG00000038145.18	Snrk	chr9	protein_coding	SNF related kinase
chr9	122011938	122030837	-	122005544	122030837	A3SS	0.5	50	50	ENSMUST00000042546.4	ENSMUSG00000037949.9	Ano10	chr9	protein_coding	anoctamin 10
chr9	122077957	122080213	-	122030953	122080213	A3SS	0.5	50	50	ENSMUST00000042546.4	ENSMUSG00000037949.9	Ano10	chr9	protein_coding	anoctamin 10
chr9	122082117	122086122	-	122082193	122086122	A3SS	0.5	50	50	ENSMUST00000042546.4	ENSMUSG00000037949.9	Ano10	chr9	protein_coding	anoctamin 10
chr9	122090545	122092736	-	122090719	122092736	A3SS	0.5	50	50	ENSMUST00000042546.4	ENSMUSG00000037949.9	Ano10	chr9	protein_coding	anoctamin 10
chr9	122107193	122123370	-	122104729	122123370	A3SS	0.5	50	50	ENSMUST00000042546.4	ENSMUSG00000037949.9	Ano10	chr9	protein_coding	anoctamin 10
chr9	122005544	122016592	-	122005544	122030837	A5SS	0.5	50	50	ENSMUST00000042546.4	ENSMUSG00000037949.9	Ano10	chr9	protein_coding	anoctamin 10
chr9	122092855	122100176	-	122092855	122100265	A5SS	0.5	50	50	ENSMUST00000042546.4	ENSMUSG00000037949.9	Ano10	chr9	protein_coding	anoctamin 10
chr9	122136510	122137023	-	122136401	122137023	A3SS	0.5	50	50	ENSMUST00000216452.2	ENSMUSG00000097572.3	Gm26797	chr9	lncRNA	predicted gene, 26797
chr9	122125508	122133894	-	122125508	122136261	A5SS	0.5	50	50	ENSMUST00000216452.2	ENSMUSG00000097572.3	Gm26797	chr9	lncRNA	predicted gene, 26797
chr9	122125508;122136345	122136261;122136470	-	122125508;122133959	122133894;122136470	MXE	0.5	100	100	ENSMUST00000213132.2	ENSMUSG00000097572.3	Gm26797	chr9	lncRNA	predicted gene, 26797
chr9	122125508;122136401	122136261;122137023	-	122125508;122136510	122133894;122137023	MXE	0.5	100	100	ENSMUST00000213132.2	ENSMUSG00000097572.3	Gm26797	chr9	lncRNA	predicted gene, 26797
chr9	122133959	122136470	-	122136345	122136470	3pMXE	0.5	50	50	ENSMUST00000180685.2	ENSMUSG00000097572.3	Gm26797	chr9	lncRNA	predicted gene, 26797
chr9	122180904	122196954	+	122180904;122194286	122194201;122196954	ES	0.33	50	50	ENSMUST00000156520.8	ENSMUSG00000032540.17	Abhd5	chr9	protein_coding	abhydrolase domain containing 5
chr9	122180904;122192929	122192880;122194201	+	122180904	122194201	cassetteExon	0.5	100	100	ENSMUST00000156520.8	ENSMUSG00000032540.17	Abhd5	chr9	protein_coding	abhydrolase domain containing 5
chr9	122180904	122187986	+	122180904	122194201	A3SS	0.2	50	50	ENSMUST00000156520.8	ENSMUSG00000032540.17	Abhd5	chr9	protein_coding	abhydrolase domain containing 5
chr9	122194302	122196954	+	122194286	122196954	A5SS	0.33	50	50	ENSMUST00000156520.8	ENSMUSG00000032540.17	Abhd5	chr9	protein_coding	abhydrolase domain containing 5
chr9	122180904	122187986	+	122180904	122192880	A3SS	0.2	50	50	ENSMUST00000035128.11	ENSMUSG00000032540.17	Abhd5	chr9	protein_coding	abhydrolase domain containing 5
chr9	122192769	122192880	+	122180904	122192880	A5SS	0.5	50	50	ENSMUST00000035128.11	ENSMUSG00000032540.17	Abhd5	chr9	protein_coding	abhydrolase domain containing 5
chr9	122180904;122197326	122196954;122204971	+	122180904	122204971	cassetteExon	0.5	100	100	ENSMUST00000111497.5	ENSMUSG00000032540.17	Abhd5	chr9	protein_coding	abhydrolase domain containing 5
chr9	122180904	122187986	+	122180904	122204971	A3SS	0.2	50	50	ENSMUST00000111497.5	ENSMUSG00000032540.17	Abhd5	chr9	protein_coding	abhydrolase domain containing 5
chr9	122180904	122192880	+	122180904	122204971	A3SS	0.2	50	50	ENSMUST00000111497.5	ENSMUSG00000032540.17	Abhd5	chr9	protein_coding	abhydrolase domain containing 5
chr9	122180904	122194201	+	122180904	122204971	A3SS	0.2	50	50	ENSMUST00000111497.5	ENSMUSG00000032540.17	Abhd5	chr9	protein_coding	abhydrolase domain containing 5
chr9	122180904	122196954	+	122180904	122187986	3pMXE	0.2	50	50	ENSMUST00000176005.2	ENSMUSG00000032540.17	Abhd5	chr9	protein_coding	abhydrolase domain containing 5
chr9	122180904;122194302	122194201;122196954	+	122180904	122196954	cassetteExon	0.5	100	100	ENSMUST00000175973.2	ENSMUSG00000032540.17	Abhd5	chr9	protein_coding	abhydrolase domain containing 5
chr9	122180904	122192880	+	122180904	122196954	A3SS	0.2	50	50	ENSMUST00000175973.2	ENSMUSG00000032540.17	Abhd5	chr9	protein_coding	abhydrolase domain containing 5
chr9	122406047;122483583	122483438;122502143	+	122406047	122502143	cassetteExon	0.5	100	100	ENSMUST00000181682.9	ENSMUSG00000097736.9	9530059O14Rik	chr9	lncRNA	RIKEN cDNA 9530059O14 gene
chr9	122406047	122481138	+	122406047	122502143	A3SS	0.33	50	50	ENSMUST00000181682.9	ENSMUSG00000097736.9	9530059O14Rik	chr9	lncRNA	RIKEN cDNA 9530059O14 gene
chr9	122406047	122483438	+	122406047;122481222	122481138;122483438	ES	0.5	50	50	ENSMUST00000215759.2	ENSMUSG00000097736.9	9530059O14Rik	chr9	lncRNA	RIKEN cDNA 9530059O14 gene
chr9	122518800	122522356	+	122518800	122519985	3pMXE	0.5	50	50	ENSMUST00000213492.2	ENSMUSG00000111068.2	Gm35501	chr9	lncRNA	predicted gene, 35501
chr9	122637901	122640746	+	122637901	122640823	A3SS	0.5	50	50	ENSMUST00000052740.14	ENSMUSG00000046603.17	Tcaim	chr9	protein_coding	T cell activation inhibitor, mitochondrial
chr9	122643653	122647915	+	122643653	122647839	A3SS	0.5	50	50	ENSMUST00000052740.14	ENSMUSG00000046603.17	Tcaim	chr9	protein_coding	T cell activation inhibitor, mitochondrial
chr9	122671871	122673034	-	122671871	122672760	5pMXE	0.5	50	50	ENSMUST00000207349.2	ENSMUSG00000107504.4	Gm35549	chr9	protein_coding	predicted gene, 35549
chr9	122667294	122671781	-	122652154	122671781	A3SS	0.5	50	50	ENSMUST00000207349.2	ENSMUSG00000107504.4	Gm35549	chr9	protein_coding	predicted gene, 35549
chr9	122667294	122673034	-	122667294;122671871	122671781;122673034	ES	0.5	50	50	ENSMUST00000203176.3	ENSMUSG00000107504.4	Gm35549	chr9	protein_coding	predicted gene, 35549
chr9	122667294	122673034	-	122667294	122671781	A5SS&ES	0.5	50	50	ENSMUST00000203656.3	ENSMUSG00000107504.4	Gm35549	chr9	protein_coding	predicted gene, 35549
chr9	122683053	122683772	-	122673711	122683772	A3SS	0.5	50	50	ENSMUST00000214626.2	ENSMUSG00000047036.9	Zfp445	chr9	protein_coding	zinc finger protein 445
chr9	122685890	122686132	-	122685890	122686168	A5SS	0.5	50	50	ENSMUST00000214626.2	ENSMUSG00000047036.9	Zfp445	chr9	protein_coding	zinc finger protein 445
chr9	122691409	122694979	-	122691324	122694979	A3SS	0.5	50	50	ENSMUST00000216063.2	ENSMUSG00000047036.9	Zfp445	chr9	protein_coding	zinc finger protein 445
chr9	122691409	122694802	-	122691409	122694979	A5SS	0.5	50	50	ENSMUST00000216721.2	ENSMUSG00000047036.9	Zfp445	chr9	protein_coding	zinc finger protein 445
chr9	122716298	122730980	-	122716294	122730980	A3SS	0.33	50	50	ENSMUST00000180486.8	ENSMUSG00000097322.9	A530083I20Rik	chr9	lncRNA	RIKEN cDNA A530083I20 gene
chr9	122725200	122730980	-	122716294	122730980	A3SS	0.33	50	50	ENSMUST00000180486.8	ENSMUSG00000097322.9	A530083I20Rik	chr9	lncRNA	RIKEN cDNA A530083I20 gene
chr9	122731091	122731963	-	122731091	122732091	A5SS	0.5	50	50	ENSMUST00000180486.8	ENSMUSG00000097322.9	A530083I20Rik	chr9	lncRNA	RIKEN cDNA A530083I20 gene
chr9	122725200	122730980	-	122716298	122730980	A3SS	0.33	50	50	ENSMUST00000214426.2	ENSMUSG00000097322.9	A530083I20Rik	chr9	lncRNA	RIKEN cDNA A530083I20 gene
chr9	122752403	122754073	+	122752283	122754073	A5SS	0.5	50	50	ENSMUST00000051667.14	ENSMUSG00000057895.12	Zfp105	chr9	protein_coding	zinc finger protein 105
chr9	122777173	122779870	-	122777173;122778134	122777990;122779870	ES	0.5	50	50	ENSMUST00000035154.4	ENSMUSG00000032551.8	1110059G10Rik	chr9	protein_coding	RIKEN cDNA 1110059G10 gene
chr9	122795051	122804714	+	122795051;122800851	122800754;122804714	ES	0.33	50	50	ENSMUST00000040717.7	ENSMUSG00000036768.7	Kif15	chr9	protein_coding	kinesin family member 15
chr9	122815716	122820151	+	122815716;122817088	122816911;122820151	ES	0.5	50	50	ENSMUST00000040717.7	ENSMUSG00000036768.7	Kif15	chr9	protein_coding	kinesin family member 15
chr9	122840702;122842746	122842605;122843005	+	122840702	122843005	cassetteExon	0.5	100	100	ENSMUST00000040717.7	ENSMUSG00000036768.7	Kif15	chr9	protein_coding	kinesin family member 15
chr9	122807114	122808451	+	122807114	122808535	A3SS	0.5	50	50	ENSMUST00000040717.7	ENSMUSG00000036768.7	Kif15	chr9	protein_coding	kinesin family member 15
chr9	122810662	122813865	+	122808927	122813865	A5SS	0.5	50	50	ENSMUST00000040717.7	ENSMUSG00000036768.7	Kif15	chr9	protein_coding	kinesin family member 15
chr9	122840812	122843005	+	122840702	122843005	A5SS	0.33	50	50	ENSMUST00000040717.7	ENSMUSG00000036768.7	Kif15	chr9	protein_coding	kinesin family member 15
chr9	122795051;122804893	122804714;122806905	+	122795051	122806905	cassetteExon	0.5	100	100	ENSMUST00000214652.2	ENSMUSG00000036768.7	Kif15	chr9	protein_coding	kinesin family member 15
chr9	122780217	122788182	+	122780217	122795014	A3SS	0.5	50	50	ENSMUST00000214652.2	ENSMUSG00000036768.7	Kif15	chr9	protein_coding	kinesin family member 15
chr9	122795051	122800754	+	122795051	122806905	A3SS	0.33	50	50	ENSMUST00000214652.2	ENSMUSG00000036768.7	Kif15	chr9	protein_coding	kinesin family member 15
chr9	122792621	122795014	+	122780217	122795014	A5SS	0.5	50	50	ENSMUST00000214652.2	ENSMUSG00000036768.7	Kif15	chr9	protein_coding	kinesin family member 15
chr9	122780217;122795051	122795014;122804714	+	122780217;122789055	122788182;122804714	MXE	0.5	100	100	ENSMUST00000217401.2	ENSMUSG00000036768.7	Kif15	chr9	protein_coding	kinesin family member 15
chr9	122789055	122792545	+	122789055	122804714	A3SS	0.5	50	50	ENSMUST00000217401.2	ENSMUSG00000036768.7	Kif15	chr9	protein_coding	kinesin family member 15
chr9	122800851	122804714	+	122789055	122804714	A5SS	0.33	50	50	ENSMUST00000217401.2	ENSMUSG00000036768.7	Kif15	chr9	protein_coding	kinesin family member 15
chr9	122795051	122804714	+	122795051	122800754	3pMXE	0.33	50	50	ENSMUST00000215176.2	ENSMUSG00000036768.7	Kif15	chr9	protein_coding	kinesin family member 15
chr9	122815716	122820151	+	122815716	122816911	3pMXE	0.5	50	50	ENSMUST00000217415.2	ENSMUSG00000036768.7	Kif15	chr9	protein_coding	kinesin family member 15
chr9	122840812	122843005	+	122842746	122843005	A5SS&ES	0.33	50	50	ENSMUST00000216048.2	ENSMUSG00000036768.7	Kif15	chr9	protein_coding	kinesin family member 15
chr9	122851377	122869439	+	122851377	122851904	3pMXE	0.33	50	50	ENSMUST00000084733.7	ENSMUSG00000066233.7	Tmem42	chr9	protein_coding	transmembrane protein 42
chr9	122850635;122851135	122850924;122851231	+	122850635	122851231	cassetteExon	0.5	100	100	ENSMUST00000084733.7	ENSMUSG00000066233.7	Tmem42	chr9	protein_coding	transmembrane protein 42
chr9	122851377	122852483	+	122851377	122851904	A3SS	0.33	50	50	ENSMUST00000084733.7	ENSMUSG00000066233.7	Tmem42	chr9	protein_coding	transmembrane protein 42
chr9	122851377	122869439	+	122851377	122852483	3pMXE	0.33	50	50	ENSMUST00000213514.2	ENSMUSG00000066233.7	Tmem42	chr9	protein_coding	transmembrane protein 42
chr9	122850635	122851231	+	122850635	122850924	3pMXE	0.5	50	50	ENSMUST00000214077.2	ENSMUSG00000066233.7	Tmem42	chr9	protein_coding	transmembrane protein 42
chr9	122870656	122880270	+	122870656	122874050	3pMXE	0.5	50	50	ENSMUST00000217036.2	ENSMUSG00000111789.2	Gm49323	chr9	lncRNA	predicted gene, 49323
chr9	122863890	122869439	+	122851377	122869439	A5SS	0.33	50	50	ENSMUST00000217036.2	ENSMUSG00000111789.2	Gm49323	chr9	lncRNA	predicted gene, 49323
chr9	122868685	122869439	+	122851377	122869439	A5SS	0.33	50	50	ENSMUST00000217036.2	ENSMUSG00000111789.2	Gm49323	chr9	lncRNA	predicted gene, 49323
chr9	122863890;122868685	122868586;122869439	+	122863890	122869439	cassetteExon	0.5	100	100	ENSMUST00000217607.2	ENSMUSG00000025787.7	Tgm4	chr9	protein_coding	transglutaminase 4 (prostate)
chr9	122863890	122864313	+	122863890	122869439	A3SS	0.25	50	50	ENSMUST00000217607.2	ENSMUSG00000025787.7	Tgm4	chr9	protein_coding	transglutaminase 4 (prostate)
chr9	122890966	122891458	+	122890966	122891451	A3SS	0.5	50	50	ENSMUST00000026893.6	ENSMUSG00000025787.7	Tgm4	chr9	protein_coding	transglutaminase 4 (prostate)
chr9	122863890	122868586	+	122863890	122864313	3pMXE	0.25	50	50	ENSMUST00000143364.2	ENSMUSG00000025787.7	Tgm4	chr9	protein_coding	transglutaminase 4 (prostate)
chr9	122863890	122890691	+	122863890	122864313	3pMXE	0.25	50	50	ENSMUST00000143364.2	ENSMUSG00000025787.7	Tgm4	chr9	protein_coding	transglutaminase 4 (prostate)
chr9	122869612	122870559	+	122869612	122880394	A3SS	0.5	50	50	ENSMUST00000171897.3	ENSMUSG00000025787.7	Tgm4	chr9	protein_coding	transglutaminase 4 (prostate)
chr9	122880322	122880394	+	122869612	122880394	A5SS	0.5	50	50	ENSMUST00000171897.3	ENSMUSG00000025787.7	Tgm4	chr9	protein_coding	transglutaminase 4 (prostate)
chr9	122863890	122868586	+	122863890	122890691	A3SS	0.25	50	50	ENSMUST00000215247.2	ENSMUSG00000025787.7	Tgm4	chr9	protein_coding	transglutaminase 4 (prostate)
chr9	122863890	122869439	+	122863890	122890691	A3SS	0.25	50	50	ENSMUST00000215247.2	ENSMUSG00000025787.7	Tgm4	chr9	protein_coding	transglutaminase 4 (prostate)
chr9	122885747	122890691	+	122863890	122890691	A5SS	0.5	50	50	ENSMUST00000215247.2	ENSMUSG00000025787.7	Tgm4	chr9	protein_coding	transglutaminase 4 (prostate)
chr9	122913375;122928039	122927988;122929324	-	122913375;122918221	122918097;122929324	MXE	0.5	100	100	ENSMUST00000140497.8	ENSMUSG00000025786.18	Zdhhc3	chr9	protein_coding	zinc finger, DHHC domain containing 3
chr9	122918221;122928039	122927988;122929324	-	122918221	122929324	cassetteExon	0.5	100	100	ENSMUST00000140497.8	ENSMUSG00000025786.18	Zdhhc3	chr9	protein_coding	zinc finger, DHHC domain containing 3
chr9	122929657;122941753	122941499;122942061	-	122929657	122942061	cassetteExon	0.5	100	100	ENSMUST00000140497.8	ENSMUSG00000025786.18	Zdhhc3	chr9	protein_coding	zinc finger, DHHC domain containing 3
chr9	122907386	122909416	-	122899683	122909416	A3SS	0.5	50	50	ENSMUST00000140497.8	ENSMUSG00000025786.18	Zdhhc3	chr9	protein_coding	zinc finger, DHHC domain containing 3
chr9	122913375	122929328	-	122913375	122918097	A5SS&ES	0.33	50	50	ENSMUST00000140497.8	ENSMUSG00000025786.18	Zdhhc3	chr9	protein_coding	zinc finger, DHHC domain containing 3
chr9	122918221	122919701	-	122918221	122929324	A5SS	0.2	50	50	ENSMUST00000140497.8	ENSMUSG00000025786.18	Zdhhc3	chr9	protein_coding	zinc finger, DHHC domain containing 3
chr9	122918221	122920042	-	122918221	122929324	A5SS	0.2	50	50	ENSMUST00000140497.8	ENSMUSG00000025786.18	Zdhhc3	chr9	protein_coding	zinc finger, DHHC domain containing 3
chr9	122918221	122929328	-	122918221	122929324	A5SS	0.2	50	50	ENSMUST00000140497.8	ENSMUSG00000025786.18	Zdhhc3	chr9	protein_coding	zinc finger, DHHC domain containing 3
chr9	122913375	122929328	-	122913375;122918221	122918097;122929328	ES	0.25	50	50	ENSMUST00000238520.2	ENSMUSG00000025786.18	Zdhhc3	chr9	protein_coding	zinc finger, DHHC domain containing 3
chr9	122918221;122920197	122919701;122929328	-	122918221	122929328	cassetteExon	0.5	100	100	ENSMUST00000238520.2	ENSMUSG00000025786.18	Zdhhc3	chr9	protein_coding	zinc finger, DHHC domain containing 3
chr9	122918221;122920197	122920042;122929328	-	122918221	122929328	cassetteExon	0.5	100	100	ENSMUST00000238520.2	ENSMUSG00000025786.18	Zdhhc3	chr9	protein_coding	zinc finger, DHHC domain containing 3
chr9	122913375;122928039	122927988;122929328	-	122913375;122918221	122918097;122929328	MXE	0.5	100	100	ENSMUST00000238520.2	ENSMUSG00000025786.18	Zdhhc3	chr9	protein_coding	zinc finger, DHHC domain containing 3
chr9	122918221;122928039	122927988;122929328	-	122918221	122929328	cassetteExon	0.5	100	100	ENSMUST00000238520.2	ENSMUSG00000025786.18	Zdhhc3	chr9	protein_coding	zinc finger, DHHC domain containing 3
chr9	122913375	122927988	-	122913375;122918221	122918097;122927988	ES	0.5	50	50	ENSMUST00000026892.15	ENSMUSG00000025786.18	Zdhhc3	chr9	protein_coding	zinc finger, DHHC domain containing 3
chr9	122918221;122920197	122919701;122929328	-	122918221;122928039	122927988;122929328	MXE	0.5	100	100	ENSMUST00000026892.15	ENSMUSG00000025786.18	Zdhhc3	chr9	protein_coding	zinc finger, DHHC domain containing 3
chr9	122918221;122920197	122920042;122929328	-	122918221;122928039	122927988;122929328	MXE	0.5	100	100	ENSMUST00000026892.15	ENSMUSG00000025786.18	Zdhhc3	chr9	protein_coding	zinc finger, DHHC domain containing 3
chr9	122918221	122929324	-	122918221	122927988	A5SS&ES	0.2	50	50	ENSMUST00000026892.15	ENSMUSG00000025786.18	Zdhhc3	chr9	protein_coding	zinc finger, DHHC domain containing 3
chr9	122928039	122929324	-	122928039	122929328	A5SS	0.5	50	50	ENSMUST00000026892.15	ENSMUSG00000025786.18	Zdhhc3	chr9	protein_coding	zinc finger, DHHC domain containing 3
chr9	122913375;122928039	122927988;122929328	-	122913375	122929328	cassetteExon	0.5	100	100	ENSMUST00000155778.8	ENSMUSG00000025786.18	Zdhhc3	chr9	protein_coding	zinc finger, DHHC domain containing 3
chr9	122920197	122929328	-	122913375	122929328	A3SS	0.25	50	50	ENSMUST00000155778.8	ENSMUSG00000025786.18	Zdhhc3	chr9	protein_coding	zinc finger, DHHC domain containing 3
chr9	122913375;122928039	122927988;122929328	-	122913375;122920197	122918097;122929328	MXE	0.5	100	100	ENSMUST00000138622.8	ENSMUSG00000025786.18	Zdhhc3	chr9	protein_coding	zinc finger, DHHC domain containing 3
chr9	122918221	122920042	-	122918221	122919701	A5SS	0.2	50	50	ENSMUST00000138622.8	ENSMUSG00000025786.18	Zdhhc3	chr9	protein_coding	zinc finger, DHHC domain containing 3
chr9	122918221	122919701	-	122918221	122927988	A5SS	0.2	50	50	ENSMUST00000129862.2	ENSMUSG00000025786.18	Zdhhc3	chr9	protein_coding	zinc finger, DHHC domain containing 3
chr9	122918221	122920042	-	122918221	122927988	A5SS	0.2	50	50	ENSMUST00000129862.2	ENSMUSG00000025786.18	Zdhhc3	chr9	protein_coding	zinc finger, DHHC domain containing 3
chr9	122918221	122929328	-	122918221	122927988	A5SS&ES	0.2	50	50	ENSMUST00000129862.2	ENSMUSG00000025786.18	Zdhhc3	chr9	protein_coding	zinc finger, DHHC domain containing 3
chr9	122920197	122929328	-	122928039	122929328	A3SS&ES	0.25	50	50	ENSMUST00000152396.8	ENSMUSG00000025786.18	Zdhhc3	chr9	protein_coding	zinc finger, DHHC domain containing 3
chr9	122929657	122942061	-	122929657	122941499	5pMXE	0.5	50	50	ENSMUST00000130717.2	ENSMUSG00000025786.18	Zdhhc3	chr9	protein_coding	zinc finger, DHHC domain containing 3
chr9	122942387	122947960	+	122942387	122947956	A3SS	0.5	50	50	ENSMUST00000026891.5	ENSMUSG00000025785.6	Exosc7	chr9	protein_coding	exosome component 7
chr9	122942489	122947956	+	122942387	122947956	A5SS	0.5	50	50	ENSMUST00000026891.5	ENSMUSG00000025785.6	Exosc7	chr9	protein_coding	exosome component 7
chr9	122955790	122956871	+	122948400	122956871	A5SS	0.5	50	50	ENSMUST00000026891.5	ENSMUSG00000025785.6	Exosc7	chr9	protein_coding	exosome component 7
chr9	123196504	123200920	+	123196172	123200920	A5SS	0.5	50	50	ENSMUST00000038863.9	ENSMUSG00000035202.9	Lars2	chr9	protein_coding	leucyl-tRNA synthetase, mitochondrial
chr9	123339640	123345840	+	123339640;123340343	123340281;123345840	ES	0.5	50	50	ENSMUST00000026269.4	ENSMUSG00000025239.4	Limd1	chr9	protein_coding	LIM domains containing 1
chr9	123339249	123339573	+	123329297	123339573	A5SS	0.5	50	50	ENSMUST00000026269.4	ENSMUSG00000025239.4	Limd1	chr9	protein_coding	LIM domains containing 1
chr9	123358986	123376049	+	123358986;123371506	123371409;123376049	ES	0.5	50	50	ENSMUST00000026270.9	ENSMUSG00000025240.11	Sacm1l	chr9	protein_coding	SAC1 suppressor of actin mutations 1-like (yeast)
chr9	123438291	123441054	-	123438291;123439436	123439345;123441054	ES	0.5	50	50	ENSMUST00000026273.11	ENSMUSG00000025243.18	Slc6a20b	chr9	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 20B
chr9	123441194;123441852	123441727;123461175	-	123441194	123461175	cassetteExon	0.5	100	100	ENSMUST00000026273.11	ENSMUSG00000025243.18	Slc6a20b	chr9	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 20B
chr9	123441852	123461175	-	123441852	123457565	5pMXE	0.5	50	50	ENSMUST00000171122.9	ENSMUSG00000025243.18	Slc6a20b	chr9	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 20B
chr9	123492105	123507751	-	123492105;123493758	123493618;123507751	ES	0.5	50	50	ENSMUST00000171647.9	ENSMUSG00000036814.14	Slc6a20a	chr9	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 20A
chr9	123485527;123486577	123486467;123489460	-	123485527	123489460	cassetteExon	0.5	100	100	ENSMUST00000171647.9	ENSMUSG00000036814.14	Slc6a20a	chr9	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 20A
chr9	123507772	123520555	+	123507772	123603617	A3SS	0.5	50	50	ENSMUST00000163559.8	ENSMUSG00000029530.17	Ccr9	chr9	protein_coding	chemokine (C-C motif) receptor 9
chr9	123596372	123603617	+	123507772	123603617	A5SS	0.33	50	50	ENSMUST00000163559.8	ENSMUSG00000029530.17	Ccr9	chr9	protein_coding	chemokine (C-C motif) receptor 9
chr9	123596414	123608341	+	123603661	123608341	A5SS&ES	0.5	50	50	ENSMUST00000163559.8	ENSMUSG00000029530.17	Ccr9	chr9	protein_coding	chemokine (C-C motif) receptor 9
chr9	123601975	123603617	+	123507772	123603617	A5SS	0.33	50	50	ENSMUST00000163559.8	ENSMUSG00000029530.17	Ccr9	chr9	protein_coding	chemokine (C-C motif) receptor 9
chr9	123596372;123601975	123601908;123603617	+	123596372	123603617	cassetteExon	0.5	100	100	ENSMUST00000166236.9	ENSMUSG00000029530.17	Ccr9	chr9	protein_coding	chemokine (C-C motif) receptor 9
chr9	123529168	123531190	-	123529168;123530038	123529935;123531190	ES	0.5	50	50	ENSMUST00000165754.8	ENSMUSG00000025245.15	Lztfl1	chr9	protein_coding	leucine zipper transcription factor-like 1
chr9	123537051	123538619	-	123537051;123537203	123537138;123538619	ES	0.5	50	50	ENSMUST00000165754.8	ENSMUSG00000025245.15	Lztfl1	chr9	protein_coding	leucine zipper transcription factor-like 1
chr9	123538690;123539476	123539345;123540101	-	123538690	123540101	cassetteExon	0.5	100	100	ENSMUST00000165754.8	ENSMUSG00000025245.15	Lztfl1	chr9	protein_coding	leucine zipper transcription factor-like 1
chr9	123541689;123544485	123544365;123546591	-	123541689	123546591	cassetteExon	0.5	100	100	ENSMUST00000165754.8	ENSMUSG00000025245.15	Lztfl1	chr9	protein_coding	leucine zipper transcription factor-like 1
chr9	123541689;123544489	123544365;123546591	-	123541689	123546591	cassetteExon	0.5	100	100	ENSMUST00000165754.8	ENSMUSG00000025245.15	Lztfl1	chr9	protein_coding	leucine zipper transcription factor-like 1
chr9	123546249	123546591	-	123541689	123546591	A3SS	0.25	50	50	ENSMUST00000165754.8	ENSMUSG00000025245.15	Lztfl1	chr9	protein_coding	leucine zipper transcription factor-like 1
chr9	123541689	123543415	-	123541689	123546591	A5SS	0.33	50	50	ENSMUST00000165754.8	ENSMUSG00000025245.15	Lztfl1	chr9	protein_coding	leucine zipper transcription factor-like 1
chr9	123541689;123543517	123543415;123544365	-	123541689	123544365	cassetteExon	0.5	100	100	ENSMUST00000166097.8	ENSMUSG00000025245.15	Lztfl1	chr9	protein_coding	leucine zipper transcription factor-like 1
chr9	123544489;123546249	123546096;123546591	-	123544489	123546591	cassetteExon	0.5	100	100	ENSMUST00000166097.8	ENSMUSG00000025245.15	Lztfl1	chr9	protein_coding	leucine zipper transcription factor-like 1
chr9	123544485	123546591	-	123544489	123546591	A3SS	0.25	50	50	ENSMUST00000166097.8	ENSMUSG00000025245.15	Lztfl1	chr9	protein_coding	leucine zipper transcription factor-like 1
chr9	123537051	123538619	-	123537051	123537138	5pMXE	0.5	50	50	ENSMUST00000172067.2	ENSMUSG00000025245.15	Lztfl1	chr9	protein_coding	leucine zipper transcription factor-like 1
chr9	123546249	123546591	-	123544485	123546591	A3SS	0.25	50	50	ENSMUST00000163207.2	ENSMUSG00000025245.15	Lztfl1	chr9	protein_coding	leucine zipper transcription factor-like 1
chr9	123541689	123546591	-	123544489	123546591	3pMXE	0.25	50	50	ENSMUST00000165799.2	ENSMUSG00000025245.15	Lztfl1	chr9	protein_coding	leucine zipper transcription factor-like 1
chr9	123601566	123601871	-	123599054	123601871	A3SS	0.5	50	50	ENSMUST00000214413.2	ENSMUSG00000091661.3	Gm17021	chr9	lncRNA	predicted gene 17021
chr9	123672673	123673568	-	123672673	123674218	A5SS	0.5	50	50	ENSMUST00000084715.14	ENSMUSG00000025241.17	Fyco1	chr9	protein_coding	FYVE and coiled-coil domain containing 1
chr9	123672673	123673568	-	123672673	123680846	A5SS	0.33	50	50	ENSMUST00000167595.9	ENSMUSG00000025241.17	Fyco1	chr9	protein_coding	FYVE and coiled-coil domain containing 1
chr9	123672673	123674218	-	123672673	123680846	A5SS	0.33	50	50	ENSMUST00000167595.9	ENSMUSG00000025241.17	Fyco1	chr9	protein_coding	FYVE and coiled-coil domain containing 1
chr9	123635610	123638966	+	123635610	123638996	A3SS	0.5	50	50	ENSMUST00000049810.9	ENSMUSG00000048521.9	Cxcr6	chr9	protein_coding	chemokine (C-X-C motif) receptor 6
chr9	123921639	123924388	+	123921672	123924388	A5SS	0.5	50	50	ENSMUST00000111442.3	ENSMUSG00000079227.11	Ccr5	chr9	protein_coding	chemokine (C-C motif) receptor 5
chr9	123924447	123928715	+	123924447	123925079	3pMXE	0.5	50	50	ENSMUST00000169553.8	ENSMUSG00000079227.11	Ccr5	chr9	protein_coding	chemokine (C-C motif) receptor 5
chr9	123930385	123947530	+	123930385	123931711	3pMXE	0.5	50	50	ENSMUST00000168179.8	ENSMUSG00000079227.11	Ccr5	chr9	protein_coding	chemokine (C-C motif) receptor 5
chr9	123927251	123928715	+	123924447	123928715	A5SS	0.5	50	50	ENSMUST00000168179.8	ENSMUSG00000079227.11	Ccr5	chr9	protein_coding	chemokine (C-C motif) receptor 5
chr9	124058114;124067348	124067286;124075190	-	124058114	124075190	cassetteExon	0.5	100	100	ENSMUST00000177714.8	ENSMUSG00000074829.11	2010315B03Rik	chr9	protein_coding	RIKEN cDNA 2010315B03 gene
chr9	124058114;124074380	124074306;124075190	-	124058114	124075190	cassetteExon	0.5	100	100	ENSMUST00000177714.8	ENSMUSG00000074829.11	2010315B03Rik	chr9	protein_coding	RIKEN cDNA 2010315B03 gene
chr9	124058114;124074380	124074306;124075190	-	124058114;124067348	124067286;124075190	MXE	0.5	100	100	ENSMUST00000071300.13	ENSMUSG00000074829.11	2010315B03Rik	chr9	protein_coding	RIKEN cDNA 2010315B03 gene
chr9	124064353	124067286	-	124058114	124067286	A3SS	0.5	50	50	ENSMUST00000071300.13	ENSMUSG00000074829.11	2010315B03Rik	chr9	protein_coding	RIKEN cDNA 2010315B03 gene
chr9	124058114	124075190	-	124058114	124074306	5pMXE	0.33	50	50	ENSMUST00000189915.7	ENSMUSG00000074829.11	2010315B03Rik	chr9	protein_coding	RIKEN cDNA 2010315B03 gene
chr9	124058114	124067286	-	124058114	124074306	A5SS	0.33	50	50	ENSMUST00000189915.7	ENSMUSG00000074829.11	2010315B03Rik	chr9	protein_coding	RIKEN cDNA 2010315B03 gene
chr9	124074380	124075190	-	124067348	124075190	A3SS	0.5	50	50	ENSMUST00000186041.2	ENSMUSG00000074829.11	2010315B03Rik	chr9	protein_coding	RIKEN cDNA 2010315B03 gene
chr9	124101780	124105816	-	124101809	124105816	A3SS	0.5	50	50	ENSMUST00000217178.2	ENSMUSG00000111194.2	Gm47180	chr9	transcribed_unprocessed_pseudogene	predicted gene, 47180
chr9	124107308	124109230	-	124107343	124109230	A3SS	0.5	50	50	ENSMUST00000217178.2	ENSMUSG00000111194.2	Gm47180	chr9	transcribed_unprocessed_pseudogene	predicted gene, 47180
chr9	124121101	124124518	-	124121101;124121690	124121532;124124518	ES	0.5	50	50	ENSMUST00000215602.2	ENSMUSG00000079741.6	Nlrp4g	chr9	transcribed_unprocessed_pseudogene	NLR family, pyrin domain containing 4G
chr9	124196747	124197153	+	124196069	124197153	A5SS	0.5	50	50	ENSMUST00000239563.2	ENSMUSG00000093803.6	Ppp2r3d	chr9	protein_coding	protein phosphatase 2 (formerly 2A), regulatory subunit B'', delta
chr9	124201025	124201277	+	124201056	124201277	A5SS	0.5	50	50	ENSMUST00000239563.2	ENSMUSG00000093803.6	Ppp2r3d	chr9	protein_coding	protein phosphatase 2 (formerly 2A), regulatory subunit B'', delta
chr10	3208200;3209409	3209272;3209709	-	3208200	3209709	cassetteExon	0.5	100	100	ENSMUST00000214645.2	ENSMUSG00000091618.4	H60c	chr10	protein_coding	histocompatibility 60c
chr10	3217350	3217646	-	3209972	3217646	A3SS	0.5	50	50	ENSMUST00000214645.2	ENSMUSG00000091618.4	H60c	chr10	protein_coding	histocompatibility 60c
chr10	3209972	3210235	-	3209972	3217646	A5SS	0.5	50	50	ENSMUST00000214645.2	ENSMUSG00000091618.4	H60c	chr10	protein_coding	histocompatibility 60c
chr10	3316969	3373494	+	3316969	3413389	A3SS	0.5	50	50	ENSMUST00000217573.2	ENSMUSG00000040653.7	Ppp1r14c	chr10	protein_coding	protein phosphatase 1, regulatory inhibitor subunit 14C
chr10	3375766	3413389	+	3316969	3413389	A5SS	0.5	50	50	ENSMUST00000217573.2	ENSMUSG00000040653.7	Ppp1r14c	chr10	protein_coding	protein phosphatase 1, regulatory inhibitor subunit 14C
chr10	3908205;3910285	3910089;3913401	+	3908205	3913401	cassetteExon	0.5	100	100	ENSMUST00000120274.8	ENSMUSG00000040624.19	Plekhg1	chr10	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 1
chr10	3691007	3752740	+	3690540	3752740	A5SS	0.5	50	50	ENSMUST00000120274.8	ENSMUSG00000040624.19	Plekhg1	chr10	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 1
chr10	3785076	3822927	+	3752800	3822927	A5SS	0.33	50	50	ENSMUST00000120274.8	ENSMUSG00000040624.19	Plekhg1	chr10	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 1
chr10	3822725	3822927	+	3752800	3822927	A5SS	0.33	50	50	ENSMUST00000120274.8	ENSMUSG00000040624.19	Plekhg1	chr10	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 1
chr10	3822725	3822927	+	3785076	3822927	A5SS	0.33	50	50	ENSMUST00000239159.2	ENSMUSG00000040624.19	Plekhg1	chr10	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 1
chr10	4098126	4116481	+	4098126	4105542	3pMXE	0.33	50	50	ENSMUST00000117291.8	ENSMUSG00000040675.18	Mthfd1l	chr10	protein_coding	methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
chr10	3998268	3998787	+	3998268	4006750	A3SS	0.5	50	50	ENSMUST00000117291.8	ENSMUSG00000040675.18	Mthfd1l	chr10	protein_coding	methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
chr10	4098126	4105650	+	4098126	4105542	A3SS	0.33	50	50	ENSMUST00000117291.8	ENSMUSG00000040675.18	Mthfd1l	chr10	protein_coding	methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
chr10	4098126	4105650	+	4098126	4116481	A3SS	0.33	50	50	ENSMUST00000120585.8	ENSMUSG00000040675.18	Mthfd1l	chr10	protein_coding	methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
chr10	4284709	4303142	+	4263857	4303142	A5SS	0.2	50	50	ENSMUST00000045730.7	ENSMUSG00000038587.11	Akap12	chr10	protein_coding	A kinase (PRKA) anchor protein (gravin) 12
chr10	4291263	4303142	+	4263857	4303142	A5SS	0.2	50	50	ENSMUST00000045730.7	ENSMUSG00000038587.11	Akap12	chr10	protein_coding	A kinase (PRKA) anchor protein (gravin) 12
chr10	4296966	4303142	+	4263857	4303142	A5SS	0.2	50	50	ENSMUST00000045730.7	ENSMUSG00000038587.11	Akap12	chr10	protein_coding	A kinase (PRKA) anchor protein (gravin) 12
chr10	4297907	4303142	+	4263857	4303142	A5SS	0.2	50	50	ENSMUST00000045730.7	ENSMUSG00000038587.11	Akap12	chr10	protein_coding	A kinase (PRKA) anchor protein (gravin) 12
chr10	4291263	4303142	+	4284709	4303142	A5SS	0.2	50	50	ENSMUST00000239373.2	ENSMUSG00000038587.11	Akap12	chr10	protein_coding	A kinase (PRKA) anchor protein (gravin) 12
chr10	4296966	4303142	+	4284709	4303142	A5SS	0.2	50	50	ENSMUST00000239373.2	ENSMUSG00000038587.11	Akap12	chr10	protein_coding	A kinase (PRKA) anchor protein (gravin) 12
chr10	4297907	4303142	+	4284709	4303142	A5SS	0.2	50	50	ENSMUST00000239373.2	ENSMUSG00000038587.11	Akap12	chr10	protein_coding	A kinase (PRKA) anchor protein (gravin) 12
chr10	4296966	4303142	+	4291263	4303142	A5SS	0.2	50	50	ENSMUST00000239220.2	ENSMUSG00000038587.11	Akap12	chr10	protein_coding	A kinase (PRKA) anchor protein (gravin) 12
chr10	4297907	4303142	+	4291263	4303142	A5SS	0.2	50	50	ENSMUST00000239220.2	ENSMUSG00000038587.11	Akap12	chr10	protein_coding	A kinase (PRKA) anchor protein (gravin) 12
chr10	4297907	4303142	+	4296966	4303142	A5SS	0.2	50	50	ENSMUST00000216139.3	ENSMUSG00000038587.11	Akap12	chr10	protein_coding	A kinase (PRKA) anchor protein (gravin) 12
chr10	4324754	4337845	-	4324754	4337352	5pMXE	0.5	50	50	ENSMUST00000100077.5	ENSMUSG00000075327.11	Zbtb2	chr10	protein_coding	zinc finger and BTB domain containing 2
chr10	4377691;4378465	4378369;4379077	-	4377691	4379077	cassetteExon	0.5	100	100	ENSMUST00000042251.11	ENSMUSG00000019763.12	Rmnd1	chr10	protein_coding	required for meiotic nuclear division 1 homolog
chr10	4377691;4378465	4378409;4379077	-	4377691	4379077	cassetteExon	0.5	100	100	ENSMUST00000042251.11	ENSMUSG00000019763.12	Rmnd1	chr10	protein_coding	required for meiotic nuclear division 1 homolog
chr10	4379171	4382064	-	4379171	4382266	A5SS	0.5	50	50	ENSMUST00000042251.11	ENSMUSG00000019763.12	Rmnd1	chr10	protein_coding	required for meiotic nuclear division 1 homolog
chr10	4377691	4378369	-	4377691	4378409	A5SS	0.33	50	50	ENSMUST00000126102.8	ENSMUSG00000019763.12	Rmnd1	chr10	protein_coding	required for meiotic nuclear division 1 homolog
chr10	4384933	4400647	+	4384933;4389736	4389492;4400647	ES	0.5	50	50	ENSMUST00000095893.11	ENSMUSG00000061759.16	Armt1	chr10	protein_coding	acidic residue methyltransferase 1
chr10	4384933	4398309	+	4384933	4389492	A3SS&ES	0.33	50	50	ENSMUST00000095893.11	ENSMUSG00000061759.16	Armt1	chr10	protein_coding	acidic residue methyltransferase 1
chr10	4384654	4384828	+	4382711	4384828	A5SS	0.5	50	50	ENSMUST00000095893.11	ENSMUSG00000061759.16	Armt1	chr10	protein_coding	acidic residue methyltransferase 1
chr10	4384933	4400647	+	4384933	4389492	3pMXE	0.33	50	50	ENSMUST00000117489.8	ENSMUSG00000061759.16	Armt1	chr10	protein_coding	acidic residue methyltransferase 1
chr10	4384933	4400647	+	4384933	4398309	3pMXE	0.33	50	50	ENSMUST00000143037.8	ENSMUSG00000061759.16	Armt1	chr10	protein_coding	acidic residue methyltransferase 1
chr10	4459919	4462752	+	4432628	4462752	A5SS	0.33	50	50	ENSMUST00000138112.8	ENSMUSG00000019767.13	Ccdc170	chr10	protein_coding	coiled-coil domain containing 170
chr10	4461726	4462752	+	4432628	4462752	A5SS	0.33	50	50	ENSMUST00000138112.8	ENSMUSG00000019767.13	Ccdc170	chr10	protein_coding	coiled-coil domain containing 170
chr10	4483204	4483959	+	4470940	4483959	A5SS	0.5	50	50	ENSMUST00000138112.8	ENSMUSG00000019767.13	Ccdc170	chr10	protein_coding	coiled-coil domain containing 170
chr10	4461726	4462752	+	4459919	4462752	A5SS	0.33	50	50	ENSMUST00000019901.7	ENSMUSG00000019767.13	Ccdc170	chr10	protein_coding	coiled-coil domain containing 170
chr10	4562155	4662313	+	4562155;4619332	4619223;4662313	ES	0.33	50	50	ENSMUST00000149195.8	ENSMUSG00000019768.17	Esr1	chr10	protein_coding	estrogen receptor 1 (alpha)
chr10	4562155	4600491	+	4562155	4619223	A3SS	0.33	50	50	ENSMUST00000149195.8	ENSMUSG00000019768.17	Esr1	chr10	protein_coding	estrogen receptor 1 (alpha)
chr10	4604246	4619223	+	4562155	4619223	A5SS	0.5	50	50	ENSMUST00000149195.8	ENSMUSG00000019768.17	Esr1	chr10	protein_coding	estrogen receptor 1 (alpha)
chr10	4660294	4662313	+	4619332	4662313	A5SS	0.33	50	50	ENSMUST00000149195.8	ENSMUSG00000019768.17	Esr1	chr10	protein_coding	estrogen receptor 1 (alpha)
chr10	4807193	4841940	+	4807193	4889212	A3SS	0.5	50	50	ENSMUST00000105590.8	ENSMUSG00000019768.17	Esr1	chr10	protein_coding	estrogen receptor 1 (alpha)
chr10	4889350	4914701	+	4889350	4919159	A3SS	0.5	50	50	ENSMUST00000105590.8	ENSMUSG00000019768.17	Esr1	chr10	protein_coding	estrogen receptor 1 (alpha)
chr10	4873314	4889212	+	4807193	4889212	A5SS	0.33	50	50	ENSMUST00000105590.8	ENSMUSG00000019768.17	Esr1	chr10	protein_coding	estrogen receptor 1 (alpha)
chr10	4886619	4889212	+	4807193	4889212	A5SS	0.33	50	50	ENSMUST00000105590.8	ENSMUSG00000019768.17	Esr1	chr10	protein_coding	estrogen receptor 1 (alpha)
chr10	4562155	4662313	+	4562155	4619223	3pMXE	0.33	50	50	ENSMUST00000133985.2	ENSMUSG00000019768.17	Esr1	chr10	protein_coding	estrogen receptor 1 (alpha)
chr10	4562155	4600491	+	4562155	4662313	A3SS	0.33	50	50	ENSMUST00000067086.14	ENSMUSG00000019768.17	Esr1	chr10	protein_coding	estrogen receptor 1 (alpha)
chr10	4660294	4662313	+	4562155	4662313	A5SS	0.33	50	50	ENSMUST00000067086.14	ENSMUSG00000019768.17	Esr1	chr10	protein_coding	estrogen receptor 1 (alpha)
chr10	4886619	4889212	+	4873314	4889212	A5SS	0.33	50	50	ENSMUST00000127934.8	ENSMUSG00000019768.17	Esr1	chr10	protein_coding	estrogen receptor 1 (alpha)
chr10	4993753	4997531	-	4993753;4995334	4995266;4997531	ES	0.5	50	50	ENSMUST00000215295.2	ENSMUSG00000096054.4	Syne1	chr10	protein_coding	spectrin repeat containing, nuclear envelope 1
chr10	5375760	5386739	-	5375760;5376275	5376255;5386739	ES	0.5	50	50	ENSMUST00000215295.2	ENSMUSG00000096054.4	Syne1	chr10	protein_coding	spectrin repeat containing, nuclear envelope 1
chr10	5011551	5018807	-	5011551	5022037	A5SS	0.5	50	50	ENSMUST00000215295.2	ENSMUSG00000096054.4	Syne1	chr10	protein_coding	spectrin repeat containing, nuclear envelope 1
chr10	5590489	5590618	+	5589370	5590618	A5SS	0.5	50	50	ENSMUST00000019906.6	ENSMUSG00000019772.6	Vip	chr10	protein_coding	vasoactive intestinal polypeptide
chr10	5752532	5754538	-	5752532	5755259	A5SS	0.5	50	50	ENSMUST00000019907.8	ENSMUSG00000019773.8	Fbxo5	chr10	protein_coding	F-box protein 5
chr10	5769787	5770025	-	5768984	5770025	A3SS	0.5	50	50	ENSMUST00000019908.9	ENSMUSG00000019774.9	Mtrf1l	chr10	protein_coding	mitochondrial translational release factor 1-like
chr10	5812662;5868253	5868184;5872228	-	5812662	5872228	cassetteExon	0.5	100	100	ENSMUST00000131996.8	ENSMUSG00000019775.18	Rgs17	chr10	protein_coding	regulator of G-protein signaling 17
chr10	5812662	5865793	-	5812662	5872228	A5SS	0.33	50	50	ENSMUST00000131996.8	ENSMUSG00000019775.18	Rgs17	chr10	protein_coding	regulator of G-protein signaling 17
chr10	5812662;5865899	5865793;5868184	-	5812662	5868184	cassetteExon	0.5	100	100	ENSMUST00000064225.14	ENSMUSG00000019775.18	Rgs17	chr10	protein_coding	regulator of G-protein signaling 17
chr10	6780497	6922199	+	6780497;6800107	6799806;6922199	ES	0.25	50	50	ENSMUST00000147171.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6708690;6739158	6738744;6778885	+	6708690	6778885	cassetteExon	0.5	100	100	ENSMUST00000147171.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6708690;6739158	6738744;6779977	+	6708690;6779237	6778885;6779977	MXE	0.5	100	100	ENSMUST00000147171.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6708690;6739158	6738744;6799806	+	6708690;6780497	6778885;6799806	MXE	0.5	100	100	ENSMUST00000147171.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6708690;6773913	6773806;6778885	+	6708690	6778885	cassetteExon	0.5	100	100	ENSMUST00000147171.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6708690;6775263	6775115;6778885	+	6708690	6778885	cassetteExon	0.5	100	100	ENSMUST00000147171.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497;6858061	6857875;6922199	+	6780497;6800107	6799806;6922199	MXE	0.5	100	100	ENSMUST00000147171.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497;6883367	6882967;6922199	+	6780497;6800107	6799806;6922199	MXE	0.5	100	100	ENSMUST00000147171.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497;6883367	6882967;6929616	+	6780497;6922318	6799806;6929616	MXE	0.5	100	100	ENSMUST00000147171.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497;6883367	6883072;6922199	+	6780497;6800107	6799806;6922199	MXE	0.5	100	100	ENSMUST00000147171.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497;6883367	6883072;6929616	+	6780497;6922318	6799806;6929616	MXE	0.5	100	100	ENSMUST00000147171.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6708690	6710453	+	6708690	6778885	A3SS	0.16	50	50	ENSMUST00000147171.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6708690	6738570	+	6708690	6778885	A3SS	0.16	50	50	ENSMUST00000147171.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6781937	+	6780497	6799806	A3SS	0.07	50	50	ENSMUST00000147171.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6782517	+	6780497	6799806	A3SS	0.07	50	50	ENSMUST00000147171.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6788043	+	6780497	6799806	A3SS	0.07	50	50	ENSMUST00000147171.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6788405	+	6780497	6799806	A3SS	0.07	50	50	ENSMUST00000147171.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6789535	+	6780497	6799806	A3SS	0.07	50	50	ENSMUST00000147171.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6789812	+	6780497	6799806	A3SS	0.07	50	50	ENSMUST00000147171.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6790566	+	6780497	6799806	A3SS	0.07	50	50	ENSMUST00000147171.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6791259	+	6780497	6799806	A3SS	0.07	50	50	ENSMUST00000147171.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6741089	6778885	+	6708690	6778885	A5SS	0.16	50	50	ENSMUST00000147171.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6744308	6799806	+	6780497	6799806	A5SS&ES	0.33	50	50	ENSMUST00000147171.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6744891	6778885	+	6708690	6778885	A5SS	0.16	50	50	ENSMUST00000147171.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6964041	+	6780497;6929704	6929616;6964041	ES	0.5	50	50	ENSMUST00000105615.9	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497;6883367	6882967;6929616	+	6780497	6929616	cassetteExon	0.5	100	100	ENSMUST00000105615.9	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497;6883367	6883072;6929616	+	6780497	6929616	cassetteExon	0.5	100	100	ENSMUST00000105615.9	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497;6922318	6922199;6929616	+	6780497	6929616	cassetteExon	0.5	100	100	ENSMUST00000105615.9	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6781937	+	6780497	6929616	A3SS	0.06	50	50	ENSMUST00000105615.9	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6782517	+	6780497	6929616	A3SS	0.06	50	50	ENSMUST00000105615.9	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6788043	+	6780497	6929616	A3SS	0.06	50	50	ENSMUST00000105615.9	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6788405	+	6780497	6929616	A3SS	0.06	50	50	ENSMUST00000105615.9	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6789535	+	6780497	6929616	A3SS	0.06	50	50	ENSMUST00000105615.9	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6789812	+	6780497	6929616	A3SS	0.06	50	50	ENSMUST00000105615.9	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6790566	+	6780497	6929616	A3SS	0.06	50	50	ENSMUST00000105615.9	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6791259	+	6780497	6929616	A3SS	0.06	50	50	ENSMUST00000105615.9	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6799806	+	6780497	6929616	A3SS	0.06	50	50	ENSMUST00000105615.9	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6857875	+	6780497	6929616	A3SS	0.06	50	50	ENSMUST00000105615.9	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6739158	6778885	+	6739158;6744891	6744789;6778885	ES	0.16	50	50	ENSMUST00000143875.2	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6708690;6710581	6710453;6738744	+	6708690	6738744	cassetteExon	0.5	100	100	ENSMUST00000143875.2	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6708690;6773913	6773806;6778885	+	6708690;6744891	6738744;6778885	MXE	0.5	100	100	ENSMUST00000143875.2	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6708690;6775263	6775115;6778885	+	6708690;6744891	6738744;6778885	MXE	0.5	100	100	ENSMUST00000143875.2	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6739158;6741089	6740995;6778885	+	6739158;6744891	6744789;6778885	MXE	0.5	100	100	ENSMUST00000143875.2	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6708690	6738570	+	6708690	6738744	A3SS	0.16	50	50	ENSMUST00000143875.2	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6739158	6744231	+	6739158	6744789	A3SS	0.25	50	50	ENSMUST00000143875.2	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6857875	+	6780497	6799806	3pMXE	0.06	50	50	ENSMUST00000105597.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6882967	+	6780497	6799806	3pMXE	0.06	50	50	ENSMUST00000105597.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6883072	+	6780497	6799806	3pMXE	0.06	50	50	ENSMUST00000105597.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6922199	+	6780497	6799806	3pMXE	0.06	50	50	ENSMUST00000105597.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6964041	+	6780497	6799806	3pMXE	0.06	50	50	ENSMUST00000105597.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6708690;6739158	6738744;6778885	+	6708690;6773913	6773806;6778885	MXE	0.5	100	100	ENSMUST00000105597.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6708690;6739158	6738744;6779977	+	6708690;6779237	6773806;6779977	MXE	0.5	100	100	ENSMUST00000105597.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6708690;6739158	6738744;6799806	+	6708690;6780497	6773806;6799806	MXE	0.5	100	100	ENSMUST00000105597.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6708690;6775263	6775115;6778885	+	6708690;6773913	6773806;6778885	MXE	0.5	100	100	ENSMUST00000105597.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6708690	6710453	+	6708690	6773806	A3SS	0.16	50	50	ENSMUST00000105597.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6708690	6738570	+	6708690	6773806	A3SS	0.16	50	50	ENSMUST00000105597.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6741089	6778885	+	6773913	6778885	A5SS&ES	0.16	50	50	ENSMUST00000105597.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6744891	6778885	+	6773913	6778885	A5SS&ES	0.16	50	50	ENSMUST00000105597.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6708690;6739158	6738744;6778885	+	6708690;6775263	6775115;6778885	MXE	0.5	100	100	ENSMUST00000150374.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6708690;6739158	6738744;6779977	+	6708690;6779237	6775115;6779977	MXE	0.5	100	100	ENSMUST00000150374.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6708690;6739158	6738744;6799806	+	6708690;6780497	6775115;6799806	MXE	0.5	100	100	ENSMUST00000150374.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6708690	6710453	+	6708690	6775115	A3SS	0.16	50	50	ENSMUST00000150374.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6708690	6738570	+	6708690	6775115	A3SS	0.16	50	50	ENSMUST00000150374.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6741089	6778885	+	6775263	6778885	A5SS&ES	0.16	50	50	ENSMUST00000150374.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6744891	6778885	+	6775263	6778885	A5SS&ES	0.16	50	50	ENSMUST00000150374.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6739158	6779977	+	6739158;6779237	6778885;6779977	ES	0.5	50	50	ENSMUST00000056385.14	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6739158;6741089	6740995;6778885	+	6739158	6778885	cassetteExon	0.5	100	100	ENSMUST00000056385.14	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6739158;6744308	6744231;6799806	+	6739158;6780497	6778885;6799806	MXE	0.5	100	100	ENSMUST00000056385.14	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6708690;6773913	6773806;6778885	+	6708690;6739158	6710453;6778885	MXE	0.5	100	100	ENSMUST00000092734.11	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6708690;6775263	6775115;6778885	+	6708690;6739158	6710453;6778885	MXE	0.5	100	100	ENSMUST00000092734.11	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6708690	6738570	+	6708690	6710453	A3SS&ES	0.16	50	50	ENSMUST00000092734.11	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6708690	6778885	+	6708690;6739158	6738570;6778885	ES	0.16	50	50	ENSMUST00000105607.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6708690;6773913	6773806;6778885	+	6708690;6739158	6738570;6778885	MXE	0.5	100	100	ENSMUST00000105607.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6708690;6775263	6775115;6778885	+	6708690;6739158	6738570;6778885	MXE	0.5	100	100	ENSMUST00000105607.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6781937	+	6780497	6964041	A3SS	0.06	50	50	ENSMUST00000063036.14	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6782517	+	6780497	6964041	A3SS	0.06	50	50	ENSMUST00000063036.14	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6788043	+	6780497	6964041	A3SS	0.06	50	50	ENSMUST00000063036.14	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6788405	+	6780497	6964041	A3SS	0.06	50	50	ENSMUST00000063036.14	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6789535	+	6780497	6964041	A3SS	0.06	50	50	ENSMUST00000063036.14	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6789812	+	6780497	6964041	A3SS	0.06	50	50	ENSMUST00000063036.14	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6790566	+	6780497	6964041	A3SS	0.06	50	50	ENSMUST00000063036.14	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6791259	+	6780497	6964041	A3SS	0.06	50	50	ENSMUST00000063036.14	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6857875	+	6780497	6964041	A3SS	0.06	50	50	ENSMUST00000063036.14	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6882967	+	6780497	6964041	A3SS	0.06	50	50	ENSMUST00000063036.14	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6883072	+	6780497	6964041	A3SS	0.06	50	50	ENSMUST00000063036.14	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6922199	+	6780497	6964041	A3SS	0.06	50	50	ENSMUST00000063036.14	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6739158	6799806	+	6739158;6744308	6744231;6799806	ES	0.33	50	50	ENSMUST00000152674.2	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6739158	6740995	+	6739158	6744231	A3SS	0.16	50	50	ENSMUST00000152674.2	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6739158	6778885	+	6739158	6744231	A3SS&ES	0.16	50	50	ENSMUST00000152674.2	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6739158	6779977	+	6739158	6744231	A3SS&ES	0.16	50	50	ENSMUST00000152674.2	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6739158	6740995	+	6739158	6779977	A3SS	0.16	50	50	ENSMUST00000105601.9	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6739158	6744789	+	6739158	6779977	A3SS	0.16	50	50	ENSMUST00000105601.9	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6739158	6799806	+	6739158	6779977	A3SS&ES	0.16	50	50	ENSMUST00000105601.9	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6708690	6778885	+	6739158	6778885	5pMXE	0.16	50	50	ENSMUST00000105602.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6773913	6778885	+	6739158	6778885	A5SS	0.16	50	50	ENSMUST00000105602.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6775263	6778885	+	6739158	6778885	A5SS	0.16	50	50	ENSMUST00000105602.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6788043	+	6780497	6782517	3pMXE	0.06	50	50	ENSMUST00000078634.12	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6788405	+	6780497	6782517	3pMXE	0.06	50	50	ENSMUST00000078634.12	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6789535	+	6780497	6782517	3pMXE	0.06	50	50	ENSMUST00000078634.12	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6789812	+	6780497	6782517	3pMXE	0.06	50	50	ENSMUST00000078634.12	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6790566	+	6780497	6782517	3pMXE	0.06	50	50	ENSMUST00000078634.12	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6791259	+	6780497	6782517	3pMXE	0.06	50	50	ENSMUST00000078634.12	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6857875	+	6780497	6782517	3pMXE	0.06	50	50	ENSMUST00000078634.12	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6882967	+	6780497	6782517	3pMXE	0.06	50	50	ENSMUST00000078634.12	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6883072	+	6780497	6782517	3pMXE	0.06	50	50	ENSMUST00000078634.12	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6922199	+	6780497	6782517	3pMXE	0.06	50	50	ENSMUST00000078634.12	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6781937	+	6780497	6782517	A3SS	0.06	50	50	ENSMUST00000078634.12	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6789535	+	6780497	6788405	3pMXE	0.06	50	50	ENSMUST00000000783.13	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6789812	+	6780497	6788405	3pMXE	0.06	50	50	ENSMUST00000000783.13	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6790566	+	6780497	6788405	3pMXE	0.06	50	50	ENSMUST00000000783.13	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6791259	+	6780497	6788405	3pMXE	0.06	50	50	ENSMUST00000000783.13	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6857875	+	6780497	6788405	3pMXE	0.06	50	50	ENSMUST00000000783.13	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6882967	+	6780497	6788405	3pMXE	0.06	50	50	ENSMUST00000000783.13	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6883072	+	6780497	6788405	3pMXE	0.06	50	50	ENSMUST00000000783.13	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6922199	+	6780497	6788405	3pMXE	0.06	50	50	ENSMUST00000000783.13	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6781937	+	6780497	6788405	A3SS	0.06	50	50	ENSMUST00000000783.13	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6788043	+	6780497	6788405	A3SS	0.06	50	50	ENSMUST00000000783.13	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6790566	+	6780497	6789812	3pMXE	0.06	50	50	ENSMUST00000092731.11	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6791259	+	6780497	6789812	3pMXE	0.06	50	50	ENSMUST00000092731.11	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6857875	+	6780497	6789812	3pMXE	0.06	50	50	ENSMUST00000092731.11	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6882967	+	6780497	6789812	3pMXE	0.06	50	50	ENSMUST00000092731.11	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6883072	+	6780497	6789812	3pMXE	0.06	50	50	ENSMUST00000092731.11	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6922199	+	6780497	6789812	3pMXE	0.06	50	50	ENSMUST00000092731.11	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6781937	+	6780497	6789812	A3SS	0.06	50	50	ENSMUST00000092731.11	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6788043	+	6780497	6789812	A3SS	0.06	50	50	ENSMUST00000092731.11	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6789535	+	6780497	6789812	A3SS	0.06	50	50	ENSMUST00000092731.11	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6791259	+	6780497;6788136	6788043;6791259	ES	0.5	50	50	ENSMUST00000092729.11	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6781937	+	6780497	6788043	A3SS	0.12	50	50	ENSMUST00000092729.11	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6789535	+	6780497	6788043	A3SS&ES	0.12	50	50	ENSMUST00000092729.11	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6790566	+	6780497	6788043	A3SS&ES	0.12	50	50	ENSMUST00000092729.11	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6857875	+	6780497	6790566	3pMXE	0.06	50	50	ENSMUST00000154906.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6882967	+	6780497	6790566	3pMXE	0.06	50	50	ENSMUST00000154906.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6883072	+	6780497	6790566	3pMXE	0.06	50	50	ENSMUST00000154906.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6922199	+	6780497	6790566	3pMXE	0.06	50	50	ENSMUST00000154906.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6781937	+	6780497	6790566	A3SS	0.06	50	50	ENSMUST00000154906.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6789535	+	6780497	6790566	A3SS	0.06	50	50	ENSMUST00000154906.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6791259	+	6780497	6790566	A3SS	0.06	50	50	ENSMUST00000154906.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6857875	+	6780497	6791259	3pMXE	0.06	50	50	ENSMUST00000105605.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6882967	+	6780497	6791259	3pMXE	0.06	50	50	ENSMUST00000105605.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6883072	+	6780497	6791259	3pMXE	0.06	50	50	ENSMUST00000105605.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6922199	+	6780497	6791259	3pMXE	0.06	50	50	ENSMUST00000105605.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6781937	+	6780497	6791259	A3SS	0.06	50	50	ENSMUST00000105605.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6789535	+	6780497	6791259	A3SS	0.06	50	50	ENSMUST00000105605.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6964041	+	6780497	6929616	3pMXE	0.06	50	50	ENSMUST00000135502.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6739158	6799806	+	6739158	6778885	A3SS&ES	0.16	50	50	ENSMUST00000135502.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6922199	+	6780497;6858061	6857875;6922199	ES	0.25	50	50	ENSMUST00000129954.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6739158;6800107	6799806;6922199	+	6739158;6858061	6778885;6922199	MXE	0.5	100	100	ENSMUST00000129954.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497;6883367	6882967;6922199	+	6780497;6858061	6857875;6922199	MXE	0.5	100	100	ENSMUST00000129954.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497;6883367	6882967;6929616	+	6780497;6922318	6857875;6929616	MXE	0.5	100	100	ENSMUST00000129954.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497;6883367	6883072;6922199	+	6780497;6858061	6857875;6922199	MXE	0.5	100	100	ENSMUST00000129954.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497;6883367	6883072;6929616	+	6780497;6922318	6857875;6929616	MXE	0.5	100	100	ENSMUST00000129954.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6781937	+	6780497	6857875	A3SS	0.06	50	50	ENSMUST00000129954.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6788043	+	6780497	6857875	A3SS	0.06	50	50	ENSMUST00000129954.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6789535	+	6780497	6857875	A3SS	0.06	50	50	ENSMUST00000129954.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6739158;6800107	6799806;6922199	+	6739158;6780497	6778885;6922199	MXE	0.5	100	100	ENSMUST00000154941.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497;6883367	6882967;6922199	+	6780497	6922199	cassetteExon	0.5	100	100	ENSMUST00000154941.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497;6883367	6882967;6929616	+	6780497;6922318	6922199;6929616	MXE	0.5	100	100	ENSMUST00000154941.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497;6883367	6883072;6922199	+	6780497	6922199	cassetteExon	0.5	100	100	ENSMUST00000154941.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497;6883367	6883072;6929616	+	6780497;6922318	6922199;6929616	MXE	0.5	100	100	ENSMUST00000154941.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6781937	+	6780497	6922199	A3SS	0.06	50	50	ENSMUST00000154941.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6788043	+	6780497	6922199	A3SS	0.06	50	50	ENSMUST00000154941.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6789535	+	6780497	6922199	A3SS	0.06	50	50	ENSMUST00000154941.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6883367	6929616	+	6883367;6922318	6922199;6929616	ES	0.33	50	50	ENSMUST00000129221.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6739158;6800107	6799806;6922199	+	6739158;6883367	6778885;6922199	MXE	0.5	100	100	ENSMUST00000129221.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6781937	+	6780497	6882967	A3SS	0.06	50	50	ENSMUST00000129221.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6788043	+	6780497	6882967	A3SS	0.06	50	50	ENSMUST00000129221.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6789535	+	6780497	6882967	A3SS	0.06	50	50	ENSMUST00000129221.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6883072	+	6780497	6882967	A3SS	0.06	50	50	ENSMUST00000129221.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6781937	+	6780497	6883072	A3SS	0.06	50	50	ENSMUST00000144264.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6788043	+	6780497	6883072	A3SS	0.06	50	50	ENSMUST00000144264.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6789535	+	6780497	6883072	A3SS	0.06	50	50	ENSMUST00000144264.8	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6789535	+	6780497	6781937	3pMXE	0.06	50	50	ENSMUST00000105603.2	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6857875	+	6780497	6882967	A3SS	0.06	50	50	ENSMUST00000141897.2	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6739158	6740995	+	6739158	6799806	A3SS	0.16	50	50	ENSMUST00000148625.2	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6739158	6744789	+	6739158	6799806	A3SS	0.16	50	50	ENSMUST00000148625.2	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6780497	6799806	+	6739158	6799806	A5SS	0.33	50	50	ENSMUST00000148625.2	ENSMUSG00000000766.19	Oprm1	chr10	protein_coding	opioid receptor, mu 1
chr10	6870086	6887101	-	6870086;6885275	6885187;6887101	ES	0.5	50	50	ENSMUST00000105617.8	ENSMUSG00000064065.16	Ipcef1	chr10	protein_coding	interaction protein for cytohesin exchange factors 1
chr10	6861958	6869714	-	6850763	6869714	A3SS	0.5	50	50	ENSMUST00000105617.8	ENSMUSG00000064065.16	Ipcef1	chr10	protein_coding	interaction protein for cytohesin exchange factors 1
chr10	6870086	6885175	-	6870086	6885187	A5SS	0.33	50	50	ENSMUST00000105617.8	ENSMUSG00000064065.16	Ipcef1	chr10	protein_coding	interaction protein for cytohesin exchange factors 1
chr10	6870086	6887101	-	6870086;6885275	6885175;6887101	ES	0.5	50	50	ENSMUST00000078070.10	ENSMUSG00000064065.16	Ipcef1	chr10	protein_coding	interaction protein for cytohesin exchange factors 1
chr10	6906132	6946530	-	6906132	6929514	5pMXE	0.5	50	50	ENSMUST00000078070.10	ENSMUSG00000064065.16	Ipcef1	chr10	protein_coding	interaction protein for cytohesin exchange factors 1
chr10	6930283	6946530	-	6906132	6946530	A3SS	0.33	50	50	ENSMUST00000170680.8	ENSMUSG00000064065.16	Ipcef1	chr10	protein_coding	interaction protein for cytohesin exchange factors 1
chr10	6930286	6946530	-	6906132	6946530	A3SS	0.33	50	50	ENSMUST00000170680.8	ENSMUSG00000064065.16	Ipcef1	chr10	protein_coding	interaction protein for cytohesin exchange factors 1
chr10	6946576	6950345	-	6946576	6973142	A5SS	0.5	50	50	ENSMUST00000170680.8	ENSMUSG00000064065.16	Ipcef1	chr10	protein_coding	interaction protein for cytohesin exchange factors 1
chr10	6930283	6946530	-	6930286	6946530	A3SS	0.33	50	50	ENSMUST00000145156.8	ENSMUSG00000064065.16	Ipcef1	chr10	protein_coding	interaction protein for cytohesin exchange factors 1
chr10	6930286	6930491	-	6930286	6946530	A5SS	0.5	50	50	ENSMUST00000145156.8	ENSMUSG00000064065.16	Ipcef1	chr10	protein_coding	interaction protein for cytohesin exchange factors 1
chr10	7406615;7407069	7406954;7423254	-	7406615	7423254	cassetteExon	0.5	100	100	ENSMUST00000218087.2	ENSMUSG00000079685.11	Ulbp1	chr10	protein_coding	UL16 binding protein 1
chr10	7406615;7407101	7406954;7423254	-	7406615	7423254	cassetteExon	0.5	100	100	ENSMUST00000218087.2	ENSMUSG00000079685.11	Ulbp1	chr10	protein_coding	UL16 binding protein 1
chr10	7406615;7407208	7406954;7423254	-	7406615	7423254	cassetteExon	0.5	100	100	ENSMUST00000218087.2	ENSMUSG00000079685.11	Ulbp1	chr10	protein_coding	UL16 binding protein 1
chr10	7407069	7423254	-	7407208	7423254	A3SS	0.25	50	50	ENSMUST00000177585.9	ENSMUSG00000079685.11	Ulbp1	chr10	protein_coding	UL16 binding protein 1
chr10	7407101	7423254	-	7407208	7423254	A3SS	0.25	50	50	ENSMUST00000177585.9	ENSMUSG00000079685.11	Ulbp1	chr10	protein_coding	UL16 binding protein 1
chr10	7407101	7423254	-	7407069	7423254	A3SS	0.25	50	50	ENSMUST00000218736.2	ENSMUSG00000079685.11	Ulbp1	chr10	protein_coding	UL16 binding protein 1
chr10	7406615	7423254	-	7407101	7423254	3pMXE	0.25	50	50	ENSMUST00000218717.2	ENSMUSG00000079685.11	Ulbp1	chr10	protein_coding	UL16 binding protein 1
chr10	7474612	7479938	+	7474612;7478718	7478593;7479938	ES	0.5	50	50	ENSMUST00000134346.8	ENSMUSG00000019796.13	Lrp11	chr10	protein_coding	low density lipoprotein receptor-related protein 11
chr10	7472028	7474471	+	7472028	7474456	A3SS	0.5	50	50	ENSMUST00000134346.8	ENSMUSG00000019796.13	Lrp11	chr10	protein_coding	low density lipoprotein receptor-related protein 11
chr10	7480147	7484312	+	7480147	7484308	A3SS	0.5	50	50	ENSMUST00000134346.8	ENSMUSG00000019796.13	Lrp11	chr10	protein_coding	low density lipoprotein receptor-related protein 11
chr10	7466377	7484308	+	7466377	7471868	A3SS&ES	0.5	50	50	ENSMUST00000130590.8	ENSMUSG00000019796.13	Lrp11	chr10	protein_coding	low density lipoprotein receptor-related protein 11
chr10	7480147	7484308	+	7466377	7484308	A5SS	0.5	50	50	ENSMUST00000135907.8	ENSMUSG00000019796.13	Lrp11	chr10	protein_coding	low density lipoprotein receptor-related protein 11
chr10	7523385	7524815	-	7523385;7524424	7524231;7524815	ES	0.5	50	50	ENSMUST00000161123.8	ENSMUSG00000019795.18	Pcmt1	chr10	protein_coding	protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
chr10	7524919	7556247	-	7524919	7538839	5pMXE	0.25	50	50	ENSMUST00000161123.8	ENSMUSG00000019795.18	Pcmt1	chr10	protein_coding	protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
chr10	7524919	7556671	-	7524919	7538839	5pMXE	0.25	50	50	ENSMUST00000161123.8	ENSMUSG00000019795.18	Pcmt1	chr10	protein_coding	protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
chr10	7513989;7514759	7514632;7515809	-	7513989	7515809	cassetteExon	0.5	100	100	ENSMUST00000161123.8	ENSMUSG00000019795.18	Pcmt1	chr10	protein_coding	protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
chr10	7506740	7513773	-	7506740	7513820	A5SS	0.5	50	50	ENSMUST00000161123.8	ENSMUSG00000019795.18	Pcmt1	chr10	protein_coding	protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
chr10	7524919	7527114	-	7524919	7538839	A5SS	0.25	50	50	ENSMUST00000161123.8	ENSMUSG00000019795.18	Pcmt1	chr10	protein_coding	protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
chr10	7524919	7527114	-	7524919	7556671	A5SS	0.25	50	50	ENSMUST00000162682.8	ENSMUSG00000019795.18	Pcmt1	chr10	protein_coding	protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
chr10	7524919	7556247	-	7524919	7556671	A5SS	0.25	50	50	ENSMUST00000162682.8	ENSMUSG00000019795.18	Pcmt1	chr10	protein_coding	protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
chr10	7524919	7556247	-	7524919	7527114	5pMXE	0.25	50	50	ENSMUST00000159835.8	ENSMUSG00000019795.18	Pcmt1	chr10	protein_coding	protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
chr10	7617329	7624540	+	7617329;7619500	7619320;7624540	ES	0.5	50	50	ENSMUST00000019929.13	ENSMUSG00000019794.14	Katna1	chr10	protein_coding	katanin p60 (ATPase-containing) subunit A1
chr10	7636633	7638554	+	7636633;7637133	7637007;7638554	ES	0.33	50	50	ENSMUST00000019929.13	ENSMUSG00000019794.14	Katna1	chr10	protein_coding	katanin p60 (ATPase-containing) subunit A1
chr10	7637125	7638554	+	7637133	7638554	A5SS	0.33	50	50	ENSMUST00000019929.13	ENSMUSG00000019794.14	Katna1	chr10	protein_coding	katanin p60 (ATPase-containing) subunit A1
chr10	7636633;7637125	7637007;7638554	+	7636633	7638554	cassetteExon	0.5	100	100	ENSMUST00000174007.2	ENSMUSG00000019794.14	Katna1	chr10	protein_coding	katanin p60 (ATPase-containing) subunit A1
chr10	7636633	7638554	+	7637125	7638554	5pMXE	0.33	50	50	ENSMUST00000173511.2	ENSMUSG00000019794.14	Katna1	chr10	protein_coding	katanin p60 (ATPase-containing) subunit A1
chr10	7655126	7668272	-	7655126	7656525	5pMXE	0.5	50	50	ENSMUST00000039763.14	ENSMUSG00000040006.14	Ginm1	chr10	protein_coding	glycoprotein integral membrane 1
chr10	7649195	7649712	-	7649192	7649712	A3SS	0.5	50	50	ENSMUST00000039763.14	ENSMUSG00000040006.14	Ginm1	chr10	protein_coding	glycoprotein integral membrane 1
chr10	7800636;7808972	7808832;7831565	-	7800636	7831565	cassetteExon	0.5	100	100	ENSMUST00000146444.8	ENSMUSG00000015755.17	Tab2	chr10	protein_coding	TGF-beta activated kinase 1/MAP3K7 binding protein 2
chr10	7796378	7798989	-	7796378	7800449	A5SS	0.5	50	50	ENSMUST00000146444.8	ENSMUSG00000015755.17	Tab2	chr10	protein_coding	TGF-beta activated kinase 1/MAP3K7 binding protein 2
chr10	8173973	8183172	-	8173973	8177956	5pMXE	0.5	50	50	ENSMUST00000219116.2	ENSMUSG00000047712.9	Ust	chr10	protein_coding	uronyl-2-sulfotransferase
chr10	8127807	8173820	-	8123950	8173820	A3SS	0.5	50	50	ENSMUST00000061601.9	ENSMUSG00000047712.9	Ust	chr10	protein_coding	uronyl-2-sulfotransferase
chr10	8123950	8126935	-	8123950	8173820	A5SS	0.5	50	50	ENSMUST00000061601.9	ENSMUSG00000047712.9	Ust	chr10	protein_coding	uronyl-2-sulfotransferase
chr10	8621954	8626417	-	8621954	8626903	A5SS	0.5	50	50	ENSMUST00000015449.6	ENSMUSG00000015305.7	Sash1	chr10	protein_coding	SAM and SH3 domain containing 1
chr10	8632525	8637859	-	8632525	8656283	A5SS	0.5	50	50	ENSMUST00000015449.6	ENSMUSG00000015305.7	Sash1	chr10	protein_coding	SAM and SH3 domain containing 1
chr10	9504793	9506582	-	9504793	9550249	A5SS	0.5	50	50	ENSMUST00000100070.5	ENSMUSG00000060487.8	Samd5	chr10	protein_coding	sterile alpha motif domain containing 5
chr10	9665172;9672765	9672682;9673866	-	9665172	9673866	cassetteExon	0.5	100	100	ENSMUST00000038213.14	ENSMUSG00000019790.18	Stxbp5	chr10	protein_coding	syntaxin binding protein 5 (tomosyn)
chr10	9645278	9646194	-	9645454	9646194	A3SS	0.5	50	50	ENSMUST00000038213.14	ENSMUSG00000019790.18	Stxbp5	chr10	protein_coding	syntaxin binding protein 5 (tomosyn)
chr10	9653810	9665107	-	9660144	9665107	A3SS&ES	0.25	50	50	ENSMUST00000038213.14	ENSMUSG00000019790.18	Stxbp5	chr10	protein_coding	syntaxin binding protein 5 (tomosyn)
chr10	9665172	9673598	-	9665172	9673866	A5SS	0.33	50	50	ENSMUST00000038213.14	ENSMUSG00000019790.18	Stxbp5	chr10	protein_coding	syntaxin binding protein 5 (tomosyn)
chr10	9646433	9665107	-	9646433;9653815	9653765;9665107	ES	0.25	50	50	ENSMUST00000141722.8	ENSMUSG00000019790.18	Stxbp5	chr10	protein_coding	syntaxin binding protein 5 (tomosyn)
chr10	9653815;9660144	9659932;9665107	-	9653815	9665107	cassetteExon	0.5	100	100	ENSMUST00000141722.8	ENSMUSG00000019790.18	Stxbp5	chr10	protein_coding	syntaxin binding protein 5 (tomosyn)
chr10	9653810	9665107	-	9653815	9665107	A3SS	0.25	50	50	ENSMUST00000141722.8	ENSMUSG00000019790.18	Stxbp5	chr10	protein_coding	syntaxin binding protein 5 (tomosyn)
chr10	9646433	9665107	-	9646433;9653810	9653765;9665107	ES	0.25	50	50	ENSMUST00000151435.8	ENSMUSG00000019790.18	Stxbp5	chr10	protein_coding	syntaxin binding protein 5 (tomosyn)
chr10	9665172	9672682	-	9665172	9673598	A5SS	0.33	50	50	ENSMUST00000151435.8	ENSMUSG00000019790.18	Stxbp5	chr10	protein_coding	syntaxin binding protein 5 (tomosyn)
chr10	9646433	9665107	-	9646433	9653765	5pMXE	0.5	50	50	ENSMUST00000136259.8	ENSMUSG00000019790.18	Stxbp5	chr10	protein_coding	syntaxin binding protein 5 (tomosyn)
chr10	9660144	9665107	-	9646433	9665107	A3SS	0.25	50	50	ENSMUST00000125200.8	ENSMUSG00000019790.18	Stxbp5	chr10	protein_coding	syntaxin binding protein 5 (tomosyn)
chr10	10111250	10129897	+	10060589	10129897	A5SS	0.5	50	50	ENSMUST00000208997.2	ENSMUSG00000109160.2	4930598N05Rik	chr10	lncRNA	RIKEN cDNA 4930598N05 gene
chr10	10110784	10111128	+	10110784	10111069	A3SS	0.5	50	50	ENSMUST00000207733.2	ENSMUSG00000109160.2	4930598N05Rik	chr10	lncRNA	RIKEN cDNA 4930598N05 gene
chr10	10133389	10134310	+	10133389	10133632	3pMXE	0.5	50	50	ENSMUST00000207048.2	ENSMUSG00000109160.2	4930598N05Rik	chr10	lncRNA	RIKEN cDNA 4930598N05 gene
chr10	10282894	10286531	-	10282894;10283315	10283186;10286531	ES	0.5	50	50	ENSMUST00000179956.8	ENSMUSG00000050994.21	Adgb	chr10	protein_coding	androglobin
chr10	10298504	10306815	-	10298504;10302477	10302343;10306815	ES	0.5	50	50	ENSMUST00000179956.8	ENSMUSG00000050994.21	Adgb	chr10	protein_coding	androglobin
chr10	10228804	10233611	-	10228807	10233611	A3SS	0.5	50	50	ENSMUST00000179956.8	ENSMUSG00000050994.21	Adgb	chr10	protein_coding	androglobin
chr10	10325855	10347985	-	10325873	10347985	A3SS	0.5	50	50	ENSMUST00000179956.8	ENSMUSG00000050994.21	Adgb	chr10	protein_coding	androglobin
chr10	10298504	10305384	-	10298504	10302343	A5SS&ES	0.33	50	50	ENSMUST00000179956.8	ENSMUSG00000050994.21	Adgb	chr10	protein_coding	androglobin
chr10	10302477	10306896	-	10302477	10306815	A5SS	0.5	50	50	ENSMUST00000179956.8	ENSMUSG00000050994.21	Adgb	chr10	protein_coding	androglobin
chr10	10298504	10306815	-	10298504	10302343	A5SS&ES	0.33	50	50	ENSMUST00000172530.8	ENSMUSG00000050994.21	Adgb	chr10	protein_coding	androglobin
chr10	10298504	10305384	-	10298504	10306815	A5SS	0.33	50	50	ENSMUST00000208717.2	ENSMUSG00000050994.21	Adgb	chr10	protein_coding	androglobin
chr10	10426700;10427007	10426818;10433589	-	10426700	10433589	cassetteExon	0.5	100	100	ENSMUST00000019974.5	ENSMUSG00000019832.6	Rab32	chr10	protein_coding	RAB32, member RAS oncogene family
chr10	10565646;10573876	10573792;10594967	-	10565646	10594967	cassetteExon	0.5	100	100	ENSMUST00000044306.13	ENSMUSG00000019828.14	Grm1	chr10	protein_coding	glutamate receptor, metabotropic 1
chr10	10565646;10592150	10592049;10594967	-	10565646	10594967	cassetteExon	0.5	100	100	ENSMUST00000044306.13	ENSMUSG00000019828.14	Grm1	chr10	protein_coding	glutamate receptor, metabotropic 1
chr10	10622073	10622289	-	10617348	10622289	A3SS	0.5	50	50	ENSMUST00000044306.13	ENSMUSG00000019828.14	Grm1	chr10	protein_coding	glutamate receptor, metabotropic 1
chr10	10622535	10624350	-	10622535	10658303	A5SS	0.5	50	50	ENSMUST00000044306.13	ENSMUSG00000019828.14	Grm1	chr10	protein_coding	glutamate receptor, metabotropic 1
chr10	10956600	10957913	-	10956600	10957993	A5SS	0.5	50	50	ENSMUST00000044306.13	ENSMUSG00000019828.14	Grm1	chr10	protein_coding	glutamate receptor, metabotropic 1
chr10	10565646;10592150	10592049;10594967	-	10565646;10573876	10573792;10594967	MXE	0.5	100	100	ENSMUST00000105561.9	ENSMUSG00000019828.14	Grm1	chr10	protein_coding	glutamate receptor, metabotropic 1
chr10	10624760	10640550	+	10624760	10631084	3pMXE	0.5	50	50	ENSMUST00000218098.2	ENSMUSG00000112730.2	4930567K20Rik	chr10	lncRNA	RIKEN cDNA 4930567K20 gene
chr10	10626944	10631084	+	10624760	10631084	A5SS	0.5	50	50	ENSMUST00000218098.2	ENSMUSG00000112730.2	4930567K20Rik	chr10	lncRNA	RIKEN cDNA 4930567K20 gene
chr10	11040739	11042352	+	11040739	11042230	A3SS	0.5	50	50	ENSMUST00000159810.8	ENSMUSG00000090112.9	Shprh	chr10	protein_coding	SNF2 histone linker PHD RING helicase
chr10	11047738	11054478	+	11047745	11054478	A5SS	0.5	50	50	ENSMUST00000159810.8	ENSMUSG00000090112.9	Shprh	chr10	protein_coding	SNF2 histone linker PHD RING helicase
chr10	11083019	11083566	+	11083019	11088066	A3SS	0.5	50	50	ENSMUST00000044053.13	ENSMUSG00000090112.9	Shprh	chr10	protein_coding	SNF2 histone linker PHD RING helicase
chr10	11063780	11065375	+	11063909	11065375	A5SS	0.5	50	50	ENSMUST00000044053.13	ENSMUSG00000090112.9	Shprh	chr10	protein_coding	SNF2 histone linker PHD RING helicase
chr10	11157467	11165264	+	11157244	11165264	A5SS	0.5	50	50	ENSMUST00000129456.8	ENSMUSG00000047648.14	Fbxo30	chr10	protein_coding	F-box protein 30
chr10	11219512	11324386	+	11219512;11266729	11266555;11324386	ES	0.5	50	50	ENSMUST00000069106.5	ENSMUSG00000055493.5	Epm2a	chr10	protein_coding	epilepsy, progressive myoclonic epilepsy, type 2 gene alpha
chr10	12413957	12423691	-	12413957	12496935	A5SS	0.33	50	50	ENSMUST00000076817.5	ENSMUSG00000019820.12	Utrn	chr10	protein_coding	utrophin
chr10	12413957	12490235	-	12413957	12496935	A5SS	0.33	50	50	ENSMUST00000076817.5	ENSMUSG00000019820.12	Utrn	chr10	protein_coding	utrophin
chr10	12627331	12640983	-	12627331	12641015	A5SS	0.5	50	50	ENSMUST00000076817.5	ENSMUSG00000019820.12	Utrn	chr10	protein_coding	utrophin
chr10	12641076	12689190	-	12641076	12737312	A5SS	0.33	50	50	ENSMUST00000076817.5	ENSMUSG00000019820.12	Utrn	chr10	protein_coding	utrophin
chr10	12641076	12702513	-	12641076	12737312	A5SS	0.33	50	50	ENSMUST00000076817.5	ENSMUSG00000019820.12	Utrn	chr10	protein_coding	utrophin
chr10	12413957	12490235	-	12413957	12423691	5pMXE	0.33	50	50	ENSMUST00000219003.2	ENSMUSG00000019820.12	Utrn	chr10	protein_coding	utrophin
chr10	12737479	12743837	-	12737479	12744499	A5SS	0.5	50	50	ENSMUST00000218635.2	ENSMUSG00000019820.12	Utrn	chr10	protein_coding	utrophin
chr10	12737479	12743837	-	12737449	12743837	A3SS	0.5	50	50	ENSMUST00000219584.2	ENSMUSG00000019820.12	Utrn	chr10	protein_coding	utrophin
chr10	12641076	12702513	-	12641076	12689190	5pMXE	0.33	50	50	ENSMUST00000217899.2	ENSMUSG00000019820.12	Utrn	chr10	protein_coding	utrophin
chr10	12797461;12798202	12798110;12798318	-	12797461	12798318	cassetteExon	0.5	100	100	ENSMUST00000181073.9	ENSMUSG00000097378.9	B230208H11Rik	chr10	lncRNA	RIKEN cDNA B230208H11 gene
chr10	12817727	12839744	-	12817727;12820030	12819896;12839744	ES	0.5	50	50	ENSMUST00000042861.7	ENSMUSG00000039232.13	Stx11	chr10	protein_coding	syntaxin 11
chr10	12817727	12839859	-	12817727	12819896	A5SS&ES	0.33	50	50	ENSMUST00000042861.7	ENSMUSG00000039232.13	Stx11	chr10	protein_coding	syntaxin 11
chr10	12820030	12839859	-	12820030	12839744	A5SS	0.5	50	50	ENSMUST00000042861.7	ENSMUSG00000039232.13	Stx11	chr10	protein_coding	syntaxin 11
chr10	12817727	12839859	-	12817727	12839744	A5SS	0.33	50	50	ENSMUST00000163425.9	ENSMUSG00000039232.13	Stx11	chr10	protein_coding	syntaxin 11
chr10	12817727;12820030	12819896;12839859	-	12817727	12839859	cassetteExon	0.5	100	100	ENSMUST00000218685.2	ENSMUSG00000039232.13	Stx11	chr10	protein_coding	syntaxin 11
chr10	12817727	12839744	-	12817727	12819896	A5SS&ES	0.33	50	50	ENSMUST00000219727.2	ENSMUSG00000039232.13	Stx11	chr10	protein_coding	syntaxin 11
chr10	12988294	12992440	+	12988294;12989964	12989902;12992440	ES	0.5	50	50	ENSMUST00000193426.6	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	12988294;12988699	12988678;12989902	+	12988294	12989902	cassetteExon	0.5	100	100	ENSMUST00000193426.6	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	12988294	12992454	+	12988294	12989902	A3SS&ES	0.25	50	50	ENSMUST00000193426.6	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	12989964	12992454	+	12989964	12992440	A3SS	0.5	50	50	ENSMUST00000193426.6	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	12981637	12988263	+	12960508	12988263	A5SS	0.33	50	50	ENSMUST00000193426.6	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	12981637	13000600	+	12992525	13000600	A5SS&ES	0.5	50	50	ENSMUST00000193426.6	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	12984652	12988263	+	12960508	12988263	A5SS	0.33	50	50	ENSMUST00000193426.6	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	12966764;12967556	12967519;12981599	+	12966764	12981599	cassetteExon	0.5	100	100	ENSMUST00000123135.8	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	12981637;12984652	12984567;12988263	+	12981637	12988263	cassetteExon	0.5	100	100	ENSMUST00000123135.8	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	12988294;12989964	12989902;12992454	+	12988294	12992454	cassetteExon	0.5	100	100	ENSMUST00000123135.8	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	12988294	12988678	+	12988294	12992454	A3SS	0.25	50	50	ENSMUST00000123135.8	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	12988294	12992440	+	12988294	12992454	A3SS	0.25	50	50	ENSMUST00000123135.8	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	12966768	12981599	+	12966764	12981599	A5SS	0.33	50	50	ENSMUST00000123135.8	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	12989247	12992454	+	12988294	12992454	A5SS	0.25	50	50	ENSMUST00000123135.8	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	12966768;12967556	12967519;12981599	+	12966768	12981599	cassetteExon	0.5	100	100	ENSMUST00000135095.8	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	12981637	12984567	+	12981637	13000600	A3SS	0.33	50	50	ENSMUST00000135095.8	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	12981637	12988263	+	12981637	13000600	A3SS	0.33	50	50	ENSMUST00000135095.8	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	12966764	12992454	+	12988294	12992454	A5SS&ES	0.25	50	50	ENSMUST00000124252.8	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	12988294	12988678	+	12988294	12992440	A3SS	0.25	50	50	ENSMUST00000121646.8	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	12981637	12988263	+	12981637	12984567	3pMXE	0.33	50	50	ENSMUST00000150773.8	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	12966768	12967519	+	12966764	12967519	A5SS	0.5	50	50	ENSMUST00000150773.8	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	12966768	12981599	+	12967556	12981599	A5SS&ES	0.33	50	50	ENSMUST00000150773.8	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	12988294	12992440	+	12988294	12989902	3pMXE	0.25	50	50	ENSMUST00000130449.8	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	12966764	12981599	+	12967556	12981599	A5SS&ES	0.33	50	50	ENSMUST00000130449.8	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	12966764	12992454	+	12989964	12992454	A5SS&ES	0.25	50	50	ENSMUST00000139262.8	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	12989247	12992454	+	12989964	12992454	A5SS&ES	0.25	50	50	ENSMUST00000139262.8	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	12966764	12992454	+	12966764	12981599	A3SS&ES	0.33	50	50	ENSMUST00000141068.8	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	12966764;12981637	12981599;13000600	+	12966764;12992525	12992454;13000600	MXE	0.5	100	100	ENSMUST00000126880.8	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	12966764	12967519	+	12966764	12992454	A3SS	0.33	50	50	ENSMUST00000126880.8	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	12989247	12992454	+	12966764	12992454	A5SS	0.25	50	50	ENSMUST00000126880.8	ENSMUSG00000019817.19	Plagl1	chr10	protein_coding	pleiomorphic adenoma gene-like 1
chr10	13044571	13053702	-	13044571;13047081	13047020;13053702	ES	0.5	50	50	ENSMUST00000019954.6	ENSMUSG00000019815.8	Zc2hc1b	chr10	protein_coding	zinc finger, C2HC-type containing 1B
chr10	13067983	13068153	-	13067983	13068772	A5SS	0.5	50	50	ENSMUST00000019950.6	ENSMUSG00000019814.6	Ltv1	chr10	protein_coding	LTV1 ribosome biogenesis factor
chr10	13129623	13137510	-	13129623;13131065	13131054;13137510	ES	0.33	50	50	ENSMUST00000105545.12	ENSMUSG00000062866.17	Phactr2	chr10	protein_coding	phosphatase and actin regulator 2
chr10	13129623;13133560	13133321;13137510	-	13129623;13131065	13131054;13137510	MXE	0.5	100	100	ENSMUST00000105545.12	ENSMUSG00000062866.17	Phactr2	chr10	protein_coding	phosphatase and actin regulator 2
chr10	13167706	13199808	-	13167706	13349800	A5SS	0.33	50	50	ENSMUST00000105545.12	ENSMUSG00000062866.17	Phactr2	chr10	protein_coding	phosphatase and actin regulator 2
chr10	13167706	13264439	-	13167706	13349800	A5SS	0.33	50	50	ENSMUST00000105545.12	ENSMUSG00000062866.17	Phactr2	chr10	protein_coding	phosphatase and actin regulator 2
chr10	13167706	13264439	-	13167706	13199808	5pMXE	0.33	50	50	ENSMUST00000105543.9	ENSMUSG00000062866.17	Phactr2	chr10	protein_coding	phosphatase and actin regulator 2
chr10	13129623;13133560	13133321;13137510	-	13129623	13137510	cassetteExon	0.5	100	100	ENSMUST00000105543.9	ENSMUSG00000062866.17	Phactr2	chr10	protein_coding	phosphatase and actin regulator 2
chr10	13259540	13264439	-	13167706	13264439	A3SS	0.5	50	50	ENSMUST00000105546.8	ENSMUSG00000062866.17	Phactr2	chr10	protein_coding	phosphatase and actin regulator 2
chr10	13375331	13378815	+	13375331	13376747	3pMXE	0.5	50	50	ENSMUST00000130865.2	ENSMUSG00000019810.16	Fuca2	chr10	protein_coding	fucosidase, alpha-L- 2, plasma
chr10	13379002	13382979	+	13379002	13381483	3pMXE	0.5	50	50	ENSMUST00000120549.2	ENSMUSG00000019810.16	Fuca2	chr10	protein_coding	fucosidase, alpha-L- 2, plasma
chr10	13375331;13377117	13376747;13378815	+	13375331	13378815	cassetteExon	0.5	100	100	ENSMUST00000120549.2	ENSMUSG00000019810.16	Fuca2	chr10	protein_coding	fucosidase, alpha-L- 2, plasma
chr10	13375331	13378815	+	13377117	13378815	5pMXE	0.5	50	50	ENSMUST00000060212.13	ENSMUSG00000019810.16	Fuca2	chr10	protein_coding	fucosidase, alpha-L- 2, plasma
chr10	13381822	13390499	+	13381822	13382450	A3SS&ES	0.5	50	50	ENSMUST00000060212.13	ENSMUSG00000019810.16	Fuca2	chr10	protein_coding	fucosidase, alpha-L- 2, plasma
chr10	13382660	13382979	+	13379002	13382979	A5SS	0.5	50	50	ENSMUST00000150048.2	ENSMUSG00000019810.16	Fuca2	chr10	protein_coding	fucosidase, alpha-L- 2, plasma
chr10	13411519	13413175	-	13411519;13411811	13411687;13413175	ES	0.5	50	50	ENSMUST00000170376.8	ENSMUSG00000019809.17	Pex3	chr10	protein_coding	peroxisomal biogenesis factor 3
chr10	13400712	13403485	-	13399687	13403485	A3SS	0.5	50	50	ENSMUST00000170376.8	ENSMUSG00000019809.17	Pex3	chr10	protein_coding	peroxisomal biogenesis factor 3
chr10	13422225	13428516	-	13422225	13428570	A5SS	0.33	50	50	ENSMUST00000170376.8	ENSMUSG00000019809.17	Pex3	chr10	protein_coding	peroxisomal biogenesis factor 3
chr10	13422225	13428693	-	13422225	13428570	A5SS	0.33	50	50	ENSMUST00000170376.8	ENSMUSG00000019809.17	Pex3	chr10	protein_coding	peroxisomal biogenesis factor 3
chr10	13422225	13428516	-	13422225	13428693	A5SS	0.33	50	50	ENSMUST00000105539.2	ENSMUSG00000019809.17	Pex3	chr10	protein_coding	peroxisomal biogenesis factor 3
chr10	13523450	13566268	-	13523450;13529493	13529330;13566268	ES	0.5	50	50	ENSMUST00000162610.8	ENSMUSG00000019806.14	Aig1	chr10	protein_coding	androgen-induced 1
chr10	13705142;13731004	13730880;13744362	-	13705142	13744362	cassetteExon	0.5	100	100	ENSMUST00000162610.8	ENSMUSG00000019806.14	Aig1	chr10	protein_coding	androgen-induced 1
chr10	13528755	13529330	-	13523450	13529330	A3SS	0.5	50	50	ENSMUST00000162610.8	ENSMUSG00000019806.14	Aig1	chr10	protein_coding	androgen-induced 1
chr10	13705142	13705372	-	13705142	13744362	A5SS	0.25	50	50	ENSMUST00000162610.8	ENSMUSG00000019806.14	Aig1	chr10	protein_coding	androgen-induced 1
chr10	13705142	13719925	-	13705142	13744362	A5SS	0.25	50	50	ENSMUST00000162610.8	ENSMUSG00000019806.14	Aig1	chr10	protein_coding	androgen-induced 1
chr10	13523450	13566268	-	13529493	13566268	3pMXE	0.5	50	50	ENSMUST00000162174.8	ENSMUSG00000019806.14	Aig1	chr10	protein_coding	androgen-induced 1
chr10	13705142	13730880	-	13705142	13719925	5pMXE	0.25	50	50	ENSMUST00000162174.8	ENSMUSG00000019806.14	Aig1	chr10	protein_coding	androgen-induced 1
chr10	13705142	13705372	-	13705142	13719925	A5SS	0.25	50	50	ENSMUST00000162174.8	ENSMUSG00000019806.14	Aig1	chr10	protein_coding	androgen-induced 1
chr10	13705142	13730880	-	13705142	13705372	A5SS&ES	0.33	50	50	ENSMUST00000162798.2	ENSMUSG00000019806.14	Aig1	chr10	protein_coding	androgen-induced 1
chr10	13942428	13993263	+	13942428;13986530	13986409;13993263	ES	0.5	50	50	ENSMUST00000187083.7	ENSMUSG00000015501.11	Hivep2	chr10	protein_coding	human immunodeficiency virus type I enhancer binding protein 2
chr10	13993344	14002196	+	13993344;13998944	13998762;14002196	ES	0.33	50	50	ENSMUST00000187083.7	ENSMUSG00000015501.11	Hivep2	chr10	protein_coding	human immunodeficiency virus type I enhancer binding protein 2
chr10	13942428	13952755	+	13942428	13986409	A3SS	0.25	50	50	ENSMUST00000187083.7	ENSMUSG00000015501.11	Hivep2	chr10	protein_coding	human immunodeficiency virus type I enhancer binding protein 2
chr10	13842441	13879945	+	13841964	13879945	A5SS	0.25	50	50	ENSMUST00000187083.7	ENSMUSG00000015501.11	Hivep2	chr10	protein_coding	human immunodeficiency virus type I enhancer binding protein 2
chr10	13842441	13942327	+	13880019	13942327	A5SS&ES	0.5	50	50	ENSMUST00000187083.7	ENSMUSG00000015501.11	Hivep2	chr10	protein_coding	human immunodeficiency virus type I enhancer binding protein 2
chr10	13842824	13879945	+	13841964	13879945	A5SS	0.25	50	50	ENSMUST00000187083.7	ENSMUSG00000015501.11	Hivep2	chr10	protein_coding	human immunodeficiency virus type I enhancer binding protein 2
chr10	13842836	13879945	+	13841964	13879945	A5SS	0.25	50	50	ENSMUST00000187083.7	ENSMUSG00000015501.11	Hivep2	chr10	protein_coding	human immunodeficiency virus type I enhancer binding protein 2
chr10	13842441;13880019	13879945;13942327	+	13842441	13942327	cassetteExon	0.5	100	100	ENSMUST00000015645.11	ENSMUSG00000015501.11	Hivep2	chr10	protein_coding	human immunodeficiency virus type I enhancer binding protein 2
chr10	13942428;13993344	13993263;14002196	+	13942428	14002196	cassetteExon	0.5	100	100	ENSMUST00000015645.11	ENSMUSG00000015501.11	Hivep2	chr10	protein_coding	human immunodeficiency virus type I enhancer binding protein 2
chr10	13942428	13952755	+	13942428	14002196	A3SS	0.25	50	50	ENSMUST00000015645.11	ENSMUSG00000015501.11	Hivep2	chr10	protein_coding	human immunodeficiency virus type I enhancer binding protein 2
chr10	13942428	13986409	+	13942428	14002196	A3SS	0.25	50	50	ENSMUST00000015645.11	ENSMUSG00000015501.11	Hivep2	chr10	protein_coding	human immunodeficiency virus type I enhancer binding protein 2
chr10	13998944	14002196	+	13942428	14002196	A5SS	0.33	50	50	ENSMUST00000015645.11	ENSMUSG00000015501.11	Hivep2	chr10	protein_coding	human immunodeficiency virus type I enhancer binding protein 2
chr10	13942428	13952755	+	13942428	13993263	A3SS	0.25	50	50	ENSMUST00000191138.7	ENSMUSG00000015501.11	Hivep2	chr10	protein_coding	human immunodeficiency virus type I enhancer binding protein 2
chr10	13842824	13879945	+	13842441	13879945	A5SS	0.25	50	50	ENSMUST00000186989.7	ENSMUSG00000015501.11	Hivep2	chr10	protein_coding	human immunodeficiency virus type I enhancer binding protein 2
chr10	13842836	13879945	+	13842441	13879945	A5SS	0.25	50	50	ENSMUST00000186989.7	ENSMUSG00000015501.11	Hivep2	chr10	protein_coding	human immunodeficiency virus type I enhancer binding protein 2
chr10	13842824	13879945	+	13842836	13879945	A5SS	0.25	50	50	ENSMUST00000185392.2	ENSMUSG00000015501.11	Hivep2	chr10	protein_coding	human immunodeficiency virus type I enhancer binding protein 2
chr10	14198486	14199252	+	14198310	14199252	A5SS	0.5	50	50	ENSMUST00000218016.2	ENSMUSG00000112679.2	Gm40603	chr10	lncRNA	predicted gene, 40603
chr10	14281182	14285417	-	14281182;14283655	14283610;14285417	ES	0.5	50	50	ENSMUST00000041168.6	ENSMUSG00000039116.8	Adgrg6	chr10	protein_coding	adhesion G protein-coupled receptor G6
chr10	14326408;14331965	14331882;14333824	-	14326408	14333824	cassetteExon	0.5	100	100	ENSMUST00000041168.6	ENSMUSG00000039116.8	Adgrg6	chr10	protein_coding	adhesion G protein-coupled receptor G6
chr10	14366598	14411598	-	14344848	14411598	A3SS	0.5	50	50	ENSMUST00000041168.6	ENSMUSG00000039116.8	Adgrg6	chr10	protein_coding	adhesion G protein-coupled receptor G6
chr10	14281182	14285417	-	14283655	14285417	3pMXE	0.5	50	50	ENSMUST00000208429.3	ENSMUSG00000039116.8	Adgrg6	chr10	protein_coding	adhesion G protein-coupled receptor G6
chr10	14531589	14543676	-	14531589;14536896	14536810;14543676	ES	0.5	50	50	ENSMUST00000154132.8	ENSMUSG00000019868.17	Vta1	chr10	protein_coding	vesicle (multivesicular body) trafficking 1
chr10	14543852	14559808	-	14543852;14551786	14551678;14559808	ES	0.5	50	50	ENSMUST00000154132.8	ENSMUSG00000019868.17	Vta1	chr10	protein_coding	vesicle (multivesicular body) trafficking 1
chr10	14560752	14581094	-	14560752;14563452	14563358;14581094	ES	0.5	50	50	ENSMUST00000154132.8	ENSMUSG00000019868.17	Vta1	chr10	protein_coding	vesicle (multivesicular body) trafficking 1
chr10	14560752;14562187	14562052;14563358	-	14560752	14563358	cassetteExon	0.5	100	100	ENSMUST00000154132.8	ENSMUSG00000019868.17	Vta1	chr10	protein_coding	vesicle (multivesicular body) trafficking 1
chr10	14560752	14562052	-	14560752	14581094	A5SS	0.33	50	50	ENSMUST00000020018.12	ENSMUSG00000019868.17	Vta1	chr10	protein_coding	vesicle (multivesicular body) trafficking 1
chr10	14581417	14610547	+	14581417;14595786	14595571;14610547	ES	0.5	50	50	ENSMUST00000191238.7	ENSMUSG00000019865.10	Nmbr	chr10	protein_coding	neuromedin B receptor
chr10	14610656	14629025	+	14610656;14610807	14610750;14629025	ES	0.5	50	50	ENSMUST00000191238.7	ENSMUSG00000019865.10	Nmbr	chr10	protein_coding	neuromedin B receptor
chr10	14629102	14632880	+	14629102	14642421	A3SS	0.5	50	50	ENSMUST00000191238.7	ENSMUSG00000019865.10	Nmbr	chr10	protein_coding	neuromedin B receptor
chr10	14636454	14642421	+	14629102	14642421	A5SS	0.33	50	50	ENSMUST00000191238.7	ENSMUSG00000019865.10	Nmbr	chr10	protein_coding	neuromedin B receptor
chr10	14610656	14642421	+	14610656	14629025	3pMXE	0.33	50	50	ENSMUST00000187449.7	ENSMUSG00000019865.10	Nmbr	chr10	protein_coding	neuromedin B receptor
chr10	14642769	14645702	+	14642769	14642891	3pMXE	0.33	50	50	ENSMUST00000190114.2	ENSMUSG00000019865.10	Nmbr	chr10	protein_coding	neuromedin B receptor
chr10	14642769	14645899	+	14642769	14642891	3pMXE	0.33	50	50	ENSMUST00000190114.2	ENSMUSG00000019865.10	Nmbr	chr10	protein_coding	neuromedin B receptor
chr10	14610656;14629102	14629025;14642421	+	14610656	14642421	cassetteExon	0.5	100	100	ENSMUST00000190114.2	ENSMUSG00000019865.10	Nmbr	chr10	protein_coding	neuromedin B receptor
chr10	14610656	14610750	+	14610656	14642421	A3SS	0.33	50	50	ENSMUST00000190114.2	ENSMUSG00000019865.10	Nmbr	chr10	protein_coding	neuromedin B receptor
chr10	14636454	14642421	+	14610656	14642421	A5SS	0.33	50	50	ENSMUST00000190114.2	ENSMUSG00000019865.10	Nmbr	chr10	protein_coding	neuromedin B receptor
chr10	14581417	14610547	+	14581417	14595571	3pMXE	0.5	50	50	ENSMUST00000186175.2	ENSMUSG00000019865.10	Nmbr	chr10	protein_coding	neuromedin B receptor
chr10	14636454	14645899	+	14636454;14642769	14642421;14645899	ES	0.33	50	50	ENSMUST00000020015.10	ENSMUSG00000019865.10	Nmbr	chr10	protein_coding	neuromedin B receptor
chr10	14642769;14645785	14645702;14645899	+	14642769	14645899	cassetteExon	0.5	100	100	ENSMUST00000020015.10	ENSMUSG00000019865.10	Nmbr	chr10	protein_coding	neuromedin B receptor
chr10	14645785	14645899	+	14636454	14645899	A5SS	0.33	50	50	ENSMUST00000190751.2	ENSMUSG00000019865.10	Nmbr	chr10	protein_coding	neuromedin B receptor
chr10	15176313	15186456	+	15176313	15268590	A3SS	0.5	50	50	ENSMUST00000220374.2	ENSMUSG00000112928.2	Gm47710	chr10	lncRNA	predicted gene, 47710
chr10	15574331;15626770	15626619;15635694	-	15574331	15635694	cassetteExon	0.5	100	100	ENSMUST00000217765.2	ENSMUSG00000112800.2	Gm40604	chr10	lncRNA	predicted gene, 40604
chr10	16839026	16857507	-	16839026;16851999	16851871;16857507	ES	0.33	50	50	ENSMUST00000207720.2	ENSMUSG00000101969.3	Gm20125	chr10	lncRNA	predicted gene, 20125
chr10	16851999;16852923	16852835;16857507	-	16851999	16857507	cassetteExon	0.5	100	100	ENSMUST00000207720.2	ENSMUSG00000101969.3	Gm20125	chr10	lncRNA	predicted gene, 20125
chr10	16829002	16830688	-	16797742	16830688	A3SS	0.5	50	50	ENSMUST00000207720.2	ENSMUSG00000101969.3	Gm20125	chr10	lncRNA	predicted gene, 20125
chr10	16963485	16971191	-	16866205	16971191	A3SS	0.5	50	50	ENSMUST00000207720.2	ENSMUSG00000101969.3	Gm20125	chr10	lncRNA	predicted gene, 20125
chr10	16857653	16910357	-	16857653	16865368	A5SS&ES	0.5	50	50	ENSMUST00000207720.2	ENSMUSG00000101969.3	Gm20125	chr10	lncRNA	predicted gene, 20125
chr10	16865487	16910357	-	16865487	16866044	A5SS&ES	0.5	50	50	ENSMUST00000207720.2	ENSMUSG00000101969.3	Gm20125	chr10	lncRNA	predicted gene, 20125
chr10	16866205	16871367	-	16866205	16971191	A5SS	0.33	50	50	ENSMUST00000207720.2	ENSMUSG00000101969.3	Gm20125	chr10	lncRNA	predicted gene, 20125
chr10	16866205	16951487	-	16866205	16971191	A5SS	0.33	50	50	ENSMUST00000207720.2	ENSMUSG00000101969.3	Gm20125	chr10	lncRNA	predicted gene, 20125
chr10	16851999	16857507	-	16851999	16852835	5pMXE	0.5	50	50	ENSMUST00000209129.2	ENSMUSG00000101969.3	Gm20125	chr10	lncRNA	predicted gene, 20125
chr10	16852002	16852835	-	16851999	16852835	A3SS	0.5	50	50	ENSMUST00000209129.2	ENSMUSG00000101969.3	Gm20125	chr10	lncRNA	predicted gene, 20125
chr10	16827801	16828966	-	16827801	16828701	A5SS	0.5	50	50	ENSMUST00000209129.2	ENSMUSG00000101969.3	Gm20125	chr10	lncRNA	predicted gene, 20125
chr10	16852923	16857507	-	16839026	16857507	A3SS	0.33	50	50	ENSMUST00000185722.2	ENSMUSG00000101969.3	Gm20125	chr10	lncRNA	predicted gene, 20125
chr10	16857653	16910357	-	16857653;16865487	16865368;16910357	ES	0.5	50	50	ENSMUST00000207495.2	ENSMUSG00000101969.3	Gm20125	chr10	lncRNA	predicted gene, 20125
chr10	16866205	16871367	-	16866205	16951487	A5SS	0.5	50	50	ENSMUST00000208596.2	ENSMUSG00000101969.3	Gm20125	chr10	lncRNA	predicted gene, 20125
chr10	16851999	16857507	-	16852923	16857507	A3SS&ES	0.5	50	50	ENSMUST00000208415.2	ENSMUSG00000101969.3	Gm20125	chr10	lncRNA	predicted gene, 20125
chr10	17599329	17599686	+	17599207	17599686	A5SS	0.5	50	50	ENSMUST00000038107.9	ENSMUSG00000039910.11	Cited2	chr10	protein_coding	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
chr10	17778125	17783782	-	17745395	17783782	A3SS	0.5	50	50	ENSMUST00000217949.2	ENSMUSG00000039879.10	Heca	chr10	protein_coding	hdc homolog, cell cycle regulator
chr10	17894649	17898815	-	17894653	17898815	A3SS	0.5	50	50	ENSMUST00000020002.9	ENSMUSG00000078453.4	Abracl	chr10	protein_coding	ABRA C-terminal like
chr10	17887564	17889031	-	17887564	17894587	A5SS	0.5	50	50	ENSMUST00000020002.9	ENSMUSG00000078453.4	Abracl	chr10	protein_coding	ABRA C-terminal like
chr10	17894653	17898562	-	17894653	17898815	A5SS	0.33	50	50	ENSMUST00000020002.9	ENSMUSG00000078453.4	Abracl	chr10	protein_coding	ABRA C-terminal like
chr10	17894653	17898743	-	17894653	17898815	A5SS	0.33	50	50	ENSMUST00000020002.9	ENSMUSG00000078453.4	Abracl	chr10	protein_coding	ABRA C-terminal like
chr10	17894653	17898743	-	17894653	17898562	5pMXE	0.33	50	50	ENSMUST00000218994.2	ENSMUSG00000078453.4	Abracl	chr10	protein_coding	ABRA C-terminal like
chr10	17965319;17968053	17967934;17968593	+	17965319	17968593	cassetteExon	0.5	100	100	ENSMUST00000154718.8	ENSMUSG00000019854.18	Reps1	chr10	protein_coding	RalBP1 associated Eps domain containing protein
chr10	17980023;17983496	17983416;17990147	+	17980023	17990147	cassetteExon	0.5	100	100	ENSMUST00000154718.8	ENSMUSG00000019854.18	Reps1	chr10	protein_coding	RalBP1 associated Eps domain containing protein
chr10	17980023;17983496	17983419;17990147	+	17980023	17990147	cassetteExon	0.5	100	100	ENSMUST00000154718.8	ENSMUSG00000019854.18	Reps1	chr10	protein_coding	RalBP1 associated Eps domain containing protein
chr10	17980023	17982955	+	17980023	17990147	A3SS	0.25	50	50	ENSMUST00000154718.8	ENSMUSG00000019854.18	Reps1	chr10	protein_coding	RalBP1 associated Eps domain containing protein
chr10	17991565	17993413	+	17991565	17995913	A3SS	0.5	50	50	ENSMUST00000154718.8	ENSMUSG00000019854.18	Reps1	chr10	protein_coding	RalBP1 associated Eps domain containing protein
chr10	17969588	17970158	+	17969651	17970158	A5SS	0.5	50	50	ENSMUST00000154718.8	ENSMUSG00000019854.18	Reps1	chr10	protein_coding	RalBP1 associated Eps domain containing protein
chr10	17994793	17995913	+	17991565	17995913	A5SS	0.5	50	50	ENSMUST00000154718.8	ENSMUSG00000019854.18	Reps1	chr10	protein_coding	RalBP1 associated Eps domain containing protein
chr10	17969071	17969527	+	17969071	17971930	A3SS	0.5	50	50	ENSMUST00000155284.8	ENSMUSG00000019854.18	Reps1	chr10	protein_coding	RalBP1 associated Eps domain containing protein
chr10	17970656	17971930	+	17969071	17971930	A5SS	0.5	50	50	ENSMUST00000155284.8	ENSMUSG00000019854.18	Reps1	chr10	protein_coding	RalBP1 associated Eps domain containing protein
chr10	17980023	17982955	+	17980023	17983416	A3SS	0.25	50	50	ENSMUST00000126390.8	ENSMUSG00000019854.18	Reps1	chr10	protein_coding	RalBP1 associated Eps domain containing protein
chr10	17980023	17983419	+	17980023	17983416	A3SS	0.25	50	50	ENSMUST00000126390.8	ENSMUSG00000019854.18	Reps1	chr10	protein_coding	RalBP1 associated Eps domain containing protein
chr10	17980023	17982955	+	17980023	17983419	A3SS	0.25	50	50	ENSMUST00000155892.3	ENSMUSG00000019854.18	Reps1	chr10	protein_coding	RalBP1 associated Eps domain containing protein
chr10	18014621	18016008	-	18014621	18014753	5pMXE	0.5	50	50	ENSMUST00000215232.2	ENSMUSG00000071392.7	Ect2l	chr10	protein_coding	epithelial cell transforming sequence 2 oncogene-like
chr10	18020390;18032974	18032849;18035498	-	18020390	18035498	cassetteExon	0.5	100	100	ENSMUST00000207827.2	ENSMUSG00000071392.7	Ect2l	chr10	protein_coding	epithelial cell transforming sequence 2 oncogene-like
chr10	18014621	18016008	-	18014615	18016008	A3SS	0.5	50	50	ENSMUST00000207827.2	ENSMUSG00000071392.7	Ect2l	chr10	protein_coding	epithelial cell transforming sequence 2 oncogene-like
chr10	18072289	18075670	-	18051111	18075670	A3SS	0.5	50	50	ENSMUST00000207827.2	ENSMUSG00000071392.7	Ect2l	chr10	protein_coding	epithelial cell transforming sequence 2 oncogene-like
chr10	18020390	18021124	-	18020390	18035498	A5SS	0.33	50	50	ENSMUST00000207827.2	ENSMUSG00000071392.7	Ect2l	chr10	protein_coding	epithelial cell transforming sequence 2 oncogene-like
chr10	18075782	18077000	-	18049892	18077000	A3SS	0.5	50	50	ENSMUST00000209178.2	ENSMUSG00000071392.7	Ect2l	chr10	protein_coding	epithelial cell transforming sequence 2 oncogene-like
chr10	18020390	18021124	-	18020390	18032849	A5SS	0.33	50	50	ENSMUST00000209178.2	ENSMUSG00000071392.7	Ect2l	chr10	protein_coding	epithelial cell transforming sequence 2 oncogene-like
chr10	18049892	18050949	-	18049892	18077000	A5SS	0.5	50	50	ENSMUST00000209178.2	ENSMUSG00000071392.7	Ect2l	chr10	protein_coding	epithelial cell transforming sequence 2 oncogene-like
chr10	18100808	18110600	-	18100808;18106366	18106167;18110600	ES	0.5	50	50	ENSMUST00000080860.13	ENSMUSG00000059554.13	Ccdc28a	chr10	protein_coding	coiled-coil domain containing 28A
chr10	18094140	18095236	-	18092030	18095236	A3SS	0.5	50	50	ENSMUST00000080860.13	ENSMUSG00000059554.13	Ccdc28a	chr10	protein_coding	coiled-coil domain containing 28A
chr10	18089926	18091941	-	18089926	18092008	A5SS	0.5	50	50	ENSMUST00000080860.13	ENSMUSG00000059554.13	Ccdc28a	chr10	protein_coding	coiled-coil domain containing 28A
chr10	18100808	18103179	-	18100808	18106167	A5SS	0.33	50	50	ENSMUST00000080860.13	ENSMUSG00000059554.13	Ccdc28a	chr10	protein_coding	coiled-coil domain containing 28A
chr10	18100808	18110600	-	18100808	18103179	5pMXE	0.33	50	50	ENSMUST00000174592.8	ENSMUSG00000059554.13	Ccdc28a	chr10	protein_coding	coiled-coil domain containing 28A
chr10	18387490;18391908	18391777;18399539	+	18387490	18399539	cassetteExon	0.5	100	100	ENSMUST00000207038.2	ENSMUSG00000039835.17	Nhsl1	chr10	protein_coding	NHS-like 1
chr10	18266258	18348667	+	18195024	18348667	A5SS	0.2	50	50	ENSMUST00000207038.2	ENSMUSG00000039835.17	Nhsl1	chr10	protein_coding	NHS-like 1
chr10	18284262	18348667	+	18195024	18348667	A5SS	0.2	50	50	ENSMUST00000207038.2	ENSMUSG00000039835.17	Nhsl1	chr10	protein_coding	NHS-like 1
chr10	18345835	18348667	+	18195024	18348667	A5SS	0.2	50	50	ENSMUST00000207038.2	ENSMUSG00000039835.17	Nhsl1	chr10	protein_coding	NHS-like 1
chr10	18345913	18348667	+	18195024	18348667	A5SS	0.2	50	50	ENSMUST00000207038.2	ENSMUSG00000039835.17	Nhsl1	chr10	protein_coding	NHS-like 1
chr10	18284262	18348667	+	18266258	18348667	A5SS	0.2	50	50	ENSMUST00000159299.8	ENSMUSG00000039835.17	Nhsl1	chr10	protein_coding	NHS-like 1
chr10	18345835	18348667	+	18266258	18348667	A5SS	0.2	50	50	ENSMUST00000159299.8	ENSMUSG00000039835.17	Nhsl1	chr10	protein_coding	NHS-like 1
chr10	18345913	18348667	+	18266258	18348667	A5SS	0.2	50	50	ENSMUST00000159299.8	ENSMUSG00000039835.17	Nhsl1	chr10	protein_coding	NHS-like 1
chr10	18284262	18294464	+	18284262	18348667	A3SS	0.5	50	50	ENSMUST00000160602.8	ENSMUSG00000039835.17	Nhsl1	chr10	protein_coding	NHS-like 1
chr10	18345835	18348667	+	18284262	18348667	A5SS	0.2	50	50	ENSMUST00000160602.8	ENSMUSG00000039835.17	Nhsl1	chr10	protein_coding	NHS-like 1
chr10	18345913	18348667	+	18284262	18348667	A5SS	0.2	50	50	ENSMUST00000160602.8	ENSMUSG00000039835.17	Nhsl1	chr10	protein_coding	NHS-like 1
chr10	18345835	18348667	+	18345913	18348667	A5SS	0.2	50	50	ENSMUST00000160547.2	ENSMUSG00000039835.17	Nhsl1	chr10	protein_coding	NHS-like 1
chr10	18417080	18420131	-	18417080	18420013	A5SS	0.5	50	50	ENSMUST00000020000.7	ENSMUSG00000019853.7	Hebp2	chr10	protein_coding	heme binding protein 2
chr10	18465520	18470656	-	18465520;18468090	18466878;18470656	ES	0.5	50	50	ENSMUST00000215836.2	ENSMUSG00000019852.8	Arfgef3	chr10	protein_coding	ARFGEF family member 3
chr10	18468090	18470656	-	18465520	18470656	A3SS	0.5	50	50	ENSMUST00000019999.7	ENSMUSG00000019852.8	Arfgef3	chr10	protein_coding	ARFGEF family member 3
chr10	18465520	18466878	-	18465520	18470656	A5SS	0.5	50	50	ENSMUST00000019999.7	ENSMUSG00000019852.8	Arfgef3	chr10	protein_coding	ARFGEF family member 3
chr10	18619632	18621969	+	18619632	18637089	A3SS	0.5	50	50	ENSMUST00000215162.2	ENSMUSG00000111474.2	Gm32926	chr10	lncRNA	predicted gene, 32926
chr10	18887538	18891296	-	18887538	18890901	5pMXE	0.33	50	50	ENSMUST00000019997.11	ENSMUSG00000019850.12	Tnfaip3	chr10	protein_coding	tumor necrosis factor, alpha-induced protein 3
chr10	18887538	18890150	-	18887538	18890901	A5SS	0.33	50	50	ENSMUST00000019997.11	ENSMUSG00000019850.12	Tnfaip3	chr10	protein_coding	tumor necrosis factor, alpha-induced protein 3
chr10	18887538	18890150	-	18887538	18891296	A5SS	0.33	50	50	ENSMUST00000122863.2	ENSMUSG00000019850.12	Tnfaip3	chr10	protein_coding	tumor necrosis factor, alpha-induced protein 3
chr10	19043111	19077882	+	19043111;19066999	19066788;19077882	ES	0.5	50	50	ENSMUST00000216041.2	ENSMUSG00000111052.2	Gm20139	chr10	lncRNA	predicted gene, 20139
chr10	19017564	19020181	+	19017564	19042998	A3SS	0.5	50	50	ENSMUST00000216041.2	ENSMUSG00000111052.2	Gm20139	chr10	lncRNA	predicted gene, 20139
chr10	19370539	19381788	+	19366765	19381788	A5SS	0.5	50	50	ENSMUST00000214178.2	ENSMUSG00000110902.2	Gm33104	chr10	lncRNA	predicted gene, 33104
chr10	19467945	19477068	+	19467945;19473278	19473164;19477068	ES	0.25	50	50	ENSMUST00000020188.13	ENSMUSG00000020009.14	Ifngr1	chr10	protein_coding	interferon gamma receptor 1
chr10	19473278;19474885	19474787;19477068	+	19473278	19477068	cassetteExon	0.5	100	100	ENSMUST00000020188.13	ENSMUSG00000020009.14	Ifngr1	chr10	protein_coding	interferon gamma receptor 1
chr10	19473264	19477068	+	19473278	19477068	A5SS	0.25	50	50	ENSMUST00000020188.13	ENSMUSG00000020009.14	Ifngr1	chr10	protein_coding	interferon gamma receptor 1
chr10	19467945	19477068	+	19467945	19473164	3pMXE	0.5	50	50	ENSMUST00000110989.3	ENSMUSG00000020009.14	Ifngr1	chr10	protein_coding	interferon gamma receptor 1
chr10	19473264	19477068	+	19474885	19477068	A5SS&ES	0.25	50	50	ENSMUST00000171772.2	ENSMUSG00000020009.14	Ifngr1	chr10	protein_coding	interferon gamma receptor 1
chr10	19467945;19473264	19473164;19477068	+	19467945	19477068	cassetteExon	0.5	100	100	ENSMUST00000172253.2	ENSMUSG00000020009.14	Ifngr1	chr10	protein_coding	interferon gamma receptor 1
chr10	19474885	19477068	+	19467945	19477068	A5SS	0.25	50	50	ENSMUST00000172253.2	ENSMUSG00000020009.14	Ifngr1	chr10	protein_coding	interferon gamma receptor 1
chr10	19618786;19620418	19620294;19624956	+	19618786	19624956	cassetteExon	0.5	100	100	ENSMUST00000020185.5	ENSMUSG00000020007.5	Il20ra	chr10	protein_coding	interleukin 20 receptor, alpha
chr10	19625134;19625731	19625534;19626390	+	19625134	19626390	cassetteExon	0.5	100	100	ENSMUST00000020185.5	ENSMUSG00000020007.5	Il20ra	chr10	protein_coding	interleukin 20 receptor, alpha
chr10	19770104	19780309	-	19770104;19770548	19770471;19780309	ES	0.5	50	50	ENSMUST00000020182.16	ENSMUSG00000020003.17	Pex7	chr10	protein_coding	peroxisomal biogenesis factor 7
chr10	19876451	19899354	+	19876451;19895327	19895304;19899354	ES	0.5	50	50	ENSMUST00000095806.10	ENSMUSG00000071369.12	Map3k5	chr10	protein_coding	mitogen-activated protein kinase kinase kinase 5
chr10	19980011	19981022	+	19980011	19983895	A3SS	0.5	50	50	ENSMUST00000095806.10	ENSMUSG00000071369.12	Map3k5	chr10	protein_coding	mitogen-activated protein kinase kinase kinase 5
chr10	19811169	19952228	+	19943682	19952228	A5SS&ES	0.5	50	50	ENSMUST00000095806.10	ENSMUSG00000071369.12	Map3k5	chr10	protein_coding	mitogen-activated protein kinase kinase kinase 5
chr10	19826922	19876312	+	19810820	19876312	A5SS	0.5	50	50	ENSMUST00000095806.10	ENSMUSG00000071369.12	Map3k5	chr10	protein_coding	mitogen-activated protein kinase kinase kinase 5
chr10	20126226	20127518	+	20126226	20132930	A3SS	0.5	50	50	ENSMUST00000020173.16	ENSMUSG00000019996.18	Map7	chr10	protein_coding	microtubule-associated protein 7
chr10	20133043	20137581	+	20133043	20137605	A3SS	0.5	50	50	ENSMUST00000020173.16	ENSMUSG00000019996.18	Map7	chr10	protein_coding	microtubule-associated protein 7
chr10	20047067	20106530	+	20024826	20106530	A5SS	0.2	50	50	ENSMUST00000020173.16	ENSMUSG00000019996.18	Map7	chr10	protein_coding	microtubule-associated protein 7
chr10	20047487	20106530	+	20024826	20106530	A5SS	0.2	50	50	ENSMUST00000020173.16	ENSMUSG00000019996.18	Map7	chr10	protein_coding	microtubule-associated protein 7
chr10	20047890	20106530	+	20024826	20106530	A5SS	0.2	50	50	ENSMUST00000020173.16	ENSMUSG00000019996.18	Map7	chr10	protein_coding	microtubule-associated protein 7
chr10	20105644	20106530	+	20024826	20106530	A5SS	0.2	50	50	ENSMUST00000020173.16	ENSMUSG00000019996.18	Map7	chr10	protein_coding	microtubule-associated protein 7
chr10	20047487	20106530	+	20047067	20106530	A5SS	0.2	50	50	ENSMUST00000217251.2	ENSMUSG00000019996.18	Map7	chr10	protein_coding	microtubule-associated protein 7
chr10	20047890	20106530	+	20047067	20106530	A5SS	0.2	50	50	ENSMUST00000217251.2	ENSMUSG00000019996.18	Map7	chr10	protein_coding	microtubule-associated protein 7
chr10	20105644	20106530	+	20047067	20106530	A5SS	0.2	50	50	ENSMUST00000217251.2	ENSMUSG00000019996.18	Map7	chr10	protein_coding	microtubule-associated protein 7
chr10	20047890	20106530	+	20047487	20106530	A5SS	0.2	50	50	ENSMUST00000216065.2	ENSMUSG00000019996.18	Map7	chr10	protein_coding	microtubule-associated protein 7
chr10	20105644	20106530	+	20047487	20106530	A5SS	0.2	50	50	ENSMUST00000216065.2	ENSMUSG00000019996.18	Map7	chr10	protein_coding	microtubule-associated protein 7
chr10	20105644	20106530	+	20047890	20106530	A5SS	0.2	50	50	ENSMUST00000213386.2	ENSMUSG00000019996.18	Map7	chr10	protein_coding	microtubule-associated protein 7
chr10	20154164;20161640	20161516;20162321	-	20154164	20162321	cassetteExon	0.5	100	100	ENSMUST00000217535.2	ENSMUSG00000111447.2	Gm48249	chr10	lncRNA	predicted gene, 48249
chr10	20151990	20153951	-	20146691	20153951	A3SS	0.5	50	50	ENSMUST00000217535.2	ENSMUSG00000111447.2	Gm48249	chr10	lncRNA	predicted gene, 48249
chr10	20201845;20203137	20202910;20203848	+	20201845	20203848	cassetteExon	0.5	100	100	ENSMUST00000092678.10	ENSMUSG00000037608.17	Bclaf1	chr10	protein_coding	BCL2-associated transcription factor 1
chr10	20208007;20208303	20208142;20209138	+	20208007	20209138	cassetteExon	0.5	100	100	ENSMUST00000092678.10	ENSMUSG00000037608.17	Bclaf1	chr10	protein_coding	BCL2-associated transcription factor 1
chr10	20209318;20210391	20210245;20215455	+	20209318	20215455	cassetteExon	0.5	100	100	ENSMUST00000092678.10	ENSMUSG00000037608.17	Bclaf1	chr10	protein_coding	BCL2-associated transcription factor 1
chr10	20197862	20198715	+	20197862	20198709	A3SS	0.5	50	50	ENSMUST00000092678.10	ENSMUSG00000037608.17	Bclaf1	chr10	protein_coding	BCL2-associated transcription factor 1
chr10	20224181	20229113	+	20224181;20228674	20228570;20229113	ES	0.5	50	50	ENSMUST00000169712.3	ENSMUSG00000019992.9	Mtfr2	chr10	protein_coding	mitochondrial fission regulator 2
chr10	20223901	20224081	+	20223669	20224081	A5SS	0.5	50	50	ENSMUST00000169712.3	ENSMUSG00000019992.9	Mtfr2	chr10	protein_coding	mitochondrial fission regulator 2
chr10	20319115;20329737	20329668;20355421	-	20319115	20355421	cassetteExon	0.5	100	100	ENSMUST00000020165.14	ENSMUSG00000019990.16	Pde7b	chr10	protein_coding	phosphodiesterase 7B
chr10	20355504;20486351	20486313;20494876	-	20355504	20494876	cassetteExon	0.5	100	100	ENSMUST00000020165.14	ENSMUSG00000019990.16	Pde7b	chr10	protein_coding	phosphodiesterase 7B
chr10	20355504	20423637	-	20355504	20494876	A5SS	0.33	50	50	ENSMUST00000020165.14	ENSMUSG00000019990.16	Pde7b	chr10	protein_coding	phosphodiesterase 7B
chr10	20355504	20486313	-	20355504	20423637	5pMXE	0.33	50	50	ENSMUST00000169016.8	ENSMUSG00000019990.16	Pde7b	chr10	protein_coding	phosphodiesterase 7B
chr10	20876604	20893812	+	20876604;20883677	20883651;20893812	ES	0.5	50	50	ENSMUST00000105525.12	ENSMUSG00000019986.18	Ahi1	chr10	protein_coding	Abelson helper integration site 1
chr10	20934149;20946442	20946187;20948442	+	20934149	20948442	cassetteExon	0.5	100	100	ENSMUST00000105525.12	ENSMUSG00000019986.18	Ahi1	chr10	protein_coding	Abelson helper integration site 1
chr10	20916961	20917085	+	20893932	20917085	A5SS	0.5	50	50	ENSMUST00000105525.12	ENSMUSG00000019986.18	Ahi1	chr10	protein_coding	Abelson helper integration site 1
chr10	20934149	20948442	+	20934149	20946187	3pMXE	0.5	50	50	ENSMUST00000214893.2	ENSMUSG00000019986.18	Ahi1	chr10	protein_coding	Abelson helper integration site 1
chr10	20934149	20948442	+	20946442	20948442	5pMXE	0.5	50	50	ENSMUST00000215543.2	ENSMUSG00000019986.18	Ahi1	chr10	protein_coding	Abelson helper integration site 1
chr10	21018991	21022085	-	21018991;21021224	21020868;21022085	ES	0.5	50	50	ENSMUST00000188495.8	ENSMUSG00000019982.16	Myb	chr10	protein_coding	myeloblastosis oncogene
chr10	21032356	21032473	-	21032356	21036595	A5SS	0.5	50	50	ENSMUST00000188495.8	ENSMUSG00000019982.16	Myb	chr10	protein_coding	myeloblastosis oncogene
chr10	21063039	21064117	+	21058852	21064117	A5SS	0.5	50	50	ENSMUST00000215633.2	ENSMUSG00000111005.2	Gm33619	chr10	lncRNA	predicted gene, 33619
chr10	21175142	21183484	+	21175142;21180542	21180429;21183484	ES	0.5	50	50	ENSMUST00000020153.10	ENSMUSG00000019977.17	Hbs1l	chr10	protein_coding	Hbs1-like (S. cerevisiae)
chr10	21183678	21184998	+	21183678	21212875	A3SS	0.25	50	50	ENSMUST00000020153.10	ENSMUSG00000019977.17	Hbs1l	chr10	protein_coding	Hbs1-like (S. cerevisiae)
chr10	21183678	21185642	+	21183678	21212875	A3SS	0.25	50	50	ENSMUST00000020153.10	ENSMUSG00000019977.17	Hbs1l	chr10	protein_coding	Hbs1-like (S. cerevisiae)
chr10	21183678	21212866	+	21183678	21212875	A3SS	0.25	50	50	ENSMUST00000020153.10	ENSMUSG00000019977.17	Hbs1l	chr10	protein_coding	Hbs1-like (S. cerevisiae)
chr10	21183678;21185213	21184998;21212866	+	21183678	21212866	cassetteExon	0.5	100	100	ENSMUST00000218032.2	ENSMUSG00000019977.17	Hbs1l	chr10	protein_coding	Hbs1-like (S. cerevisiae)
chr10	21183678	21185642	+	21183678	21212866	A3SS	0.25	50	50	ENSMUST00000218032.2	ENSMUSG00000019977.17	Hbs1l	chr10	protein_coding	Hbs1-like (S. cerevisiae)
chr10	21183678	21184998	+	21183678	21185642	A3SS	0.25	50	50	ENSMUST00000061324.6	ENSMUSG00000019977.17	Hbs1l	chr10	protein_coding	Hbs1-like (S. cerevisiae)
chr10	21183678	21212866	+	21183678	21184998	3pMXE	0.25	50	50	ENSMUST00000092674.14	ENSMUSG00000019977.17	Hbs1l	chr10	protein_coding	Hbs1-like (S. cerevisiae)
chr10	21260684	21264837	+	21260684	21264967	A3SS	0.5	50	50	ENSMUST00000042699.14	ENSMUSG00000037542.14	Aldh8a1	chr10	protein_coding	aldehyde dehydrogenase 8 family, member A1
chr10	21492292	21497545	+	21469471	21497545	A5SS	0.5	50	50	ENSMUST00000057341.6	ENSMUSG00000050844.6	1700020N01Rik	chr10	protein_coding	RIKEN cDNA 1700020N01 gene
chr10	21567720	21568305	+	21567720	21583140	A3SS	0.5	50	50	ENSMUST00000187019.7	ENSMUSG00000056716.11	Gm5420	chr10	lncRNA	predicted gene 5420
chr10	21567136	21567481	+	21562402	21567481	A5SS	0.5	50	50	ENSMUST00000187019.7	ENSMUSG00000056716.11	Gm5420	chr10	lncRNA	predicted gene 5420
chr10	21758606	21774635	+	21758606	21804241	A3SS	0.5	50	50	ENSMUST00000120509.8	ENSMUSG00000019970.16	Sgk1	chr10	protein_coding	serum/glucocorticoid regulated kinase 1
chr10	21845423	21866190	+	21845423	21870865	A3SS	0.5	50	50	ENSMUST00000120509.8	ENSMUSG00000019970.16	Sgk1	chr10	protein_coding	serum/glucocorticoid regulated kinase 1
chr10	21854881	21870865	+	21845423	21870865	A5SS	0.2	50	50	ENSMUST00000120509.8	ENSMUSG00000019970.16	Sgk1	chr10	protein_coding	serum/glucocorticoid regulated kinase 1
chr10	21868306	21870865	+	21845423	21870865	A5SS	0.2	50	50	ENSMUST00000120509.8	ENSMUSG00000019970.16	Sgk1	chr10	protein_coding	serum/glucocorticoid regulated kinase 1
chr10	21870080	21870865	+	21845423	21870865	A5SS	0.2	50	50	ENSMUST00000120509.8	ENSMUSG00000019970.16	Sgk1	chr10	protein_coding	serum/glucocorticoid regulated kinase 1
chr10	21870724	21870865	+	21845423	21870865	A5SS	0.2	50	50	ENSMUST00000120509.8	ENSMUSG00000019970.16	Sgk1	chr10	protein_coding	serum/glucocorticoid regulated kinase 1
chr10	21868306	21870865	+	21854881	21870865	A5SS	0.2	50	50	ENSMUST00000142174.8	ENSMUSG00000019970.16	Sgk1	chr10	protein_coding	serum/glucocorticoid regulated kinase 1
chr10	21870080	21870865	+	21854881	21870865	A5SS	0.2	50	50	ENSMUST00000142174.8	ENSMUSG00000019970.16	Sgk1	chr10	protein_coding	serum/glucocorticoid regulated kinase 1
chr10	21870724	21870865	+	21854881	21870865	A5SS	0.2	50	50	ENSMUST00000142174.8	ENSMUSG00000019970.16	Sgk1	chr10	protein_coding	serum/glucocorticoid regulated kinase 1
chr10	21870080	21870865	+	21868306	21870865	A5SS	0.2	50	50	ENSMUST00000150089.8	ENSMUSG00000019970.16	Sgk1	chr10	protein_coding	serum/glucocorticoid regulated kinase 1
chr10	21870724	21870865	+	21868306	21870865	A5SS	0.2	50	50	ENSMUST00000150089.8	ENSMUSG00000019970.16	Sgk1	chr10	protein_coding	serum/glucocorticoid regulated kinase 1
chr10	21870724	21870865	+	21870080	21870865	A5SS	0.2	50	50	ENSMUST00000092673.11	ENSMUSG00000019970.16	Sgk1	chr10	protein_coding	serum/glucocorticoid regulated kinase 1
chr10	21965748	21976418	+	21955360	21976418	A5SS	0.5	50	50	ENSMUST00000180720.2	ENSMUSG00000097739.2	Gm2539	chr10	transcribed_unprocessed_pseudogene	predicted gene, 2539
chr10	21993755	22024388	-	21990247	22024388	A3SS	0.33	50	50	ENSMUST00000180726.2	ENSMUSG00000097327.8	E030030I06Rik	chr10	protein_coding	RIKEN cDNA E030030I06 gene
chr10	22020413	22024388	-	21990247	22024388	A3SS	0.33	50	50	ENSMUST00000180726.2	ENSMUSG00000097327.8	E030030I06Rik	chr10	protein_coding	RIKEN cDNA E030030I06 gene
chr10	22020413	22024388	-	21993755	22024388	A3SS	0.33	50	50	ENSMUST00000181677.2	ENSMUSG00000097327.8	E030030I06Rik	chr10	protein_coding	RIKEN cDNA E030030I06 gene
chr10	22058014	22249676	+	22058014	22059454	3pMXE	0.5	50	50	ENSMUST00000181645.8	ENSMUSG00000053219.16	Raet1e	chr10	protein_coding	retinoic acid early transcript 1E
chr10	22047684	22047903	+	22034617	22047903	A5SS	0.5	50	50	ENSMUST00000181645.8	ENSMUSG00000053219.16	Raet1e	chr10	protein_coding	retinoic acid early transcript 1E
chr10	22049435	22049775	+	22049149	22049775	A5SS	0.5	50	50	ENSMUST00000181645.8	ENSMUSG00000053219.16	Raet1e	chr10	protein_coding	retinoic acid early transcript 1E
chr10	22248257	22249676	+	22058014	22249676	A5SS	0.5	50	50	ENSMUST00000178026.2	ENSMUSG00000053219.16	Raet1e	chr10	protein_coding	retinoic acid early transcript 1E
chr10	22034617	22047903	+	22034617	22159347	A3SS	0.5	50	50	ENSMUST00000105522.9	ENSMUSG00000075297.11	H60b	chr10	protein_coding	histocompatibility 60b
chr10	22149428	22159347	+	22034617	22159347	A5SS	0.5	50	50	ENSMUST00000105522.9	ENSMUSG00000075297.11	H60b	chr10	protein_coding	histocompatibility 60b
chr10	22183197	22190064	+	22183197	22184604	3pMXE	0.25	50	50	ENSMUST00000181223.8	ENSMUSG00000097352.8	C920009B18Rik	chr10	transcribed_unprocessed_pseudogene	RIKEN cDNA  C920009B18 gene
chr10	22183197	22196956	+	22183197	22184604	3pMXE	0.25	50	50	ENSMUST00000181223.8	ENSMUSG00000097352.8	C920009B18Rik	chr10	transcribed_unprocessed_pseudogene	RIKEN cDNA  C920009B18 gene
chr10	22183197	22183316	+	22183197	22184604	A3SS	0.25	50	50	ENSMUST00000181223.8	ENSMUSG00000097352.8	C920009B18Rik	chr10	transcribed_unprocessed_pseudogene	RIKEN cDNA  C920009B18 gene
chr10	22183197	22183316	+	22183197	22196956	A3SS	0.25	50	50	ENSMUST00000181643.8	ENSMUSG00000097352.8	C920009B18Rik	chr10	transcribed_unprocessed_pseudogene	RIKEN cDNA  C920009B18 gene
chr10	22183197	22190064	+	22183197	22196956	A3SS	0.25	50	50	ENSMUST00000181643.8	ENSMUSG00000097352.8	C920009B18Rik	chr10	transcribed_unprocessed_pseudogene	RIKEN cDNA  C920009B18 gene
chr10	22183197	22190064	+	22183197	22183316	3pMXE	0.25	50	50	ENSMUST00000180457.2	ENSMUSG00000097352.8	C920009B18Rik	chr10	transcribed_unprocessed_pseudogene	RIKEN cDNA  C920009B18 gene
chr10	22237808	22238170	+	22237544	22238170	A5SS	0.5	50	50	ENSMUST00000182677.8	ENSMUSG00000078452.11	Raet1d	chr10	protein_coding	retinoic acid early transcript delta
chr10	22524976	22540262	+	22521212	22540262	A5SS	0.5	50	50	ENSMUST00000042261.5	ENSMUSG00000037490.6	Slc2a12	chr10	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 12
chr10	22587990	22607682	-	22587990	22607015	5pMXE	0.5	50	50	ENSMUST00000127698.8	ENSMUSG00000071359.14	Tbpl1	chr10	protein_coding	TATA box binding protein-like 1
chr10	22581794	22582176	-	22581794	22583488	A5SS	0.5	50	50	ENSMUST00000127698.8	ENSMUSG00000071359.14	Tbpl1	chr10	protein_coding	TATA box binding protein-like 1
chr10	22982187;22985970	22985870;22987459	-	22982187;22985831	22985731;22987459	MXE	0.5	100	100	ENSMUST00000092665.12	ENSMUSG00000010461.17	Eya4	chr10	protein_coding	EYA transcriptional coactivator and phosphatase 4
chr10	23039384;23047592	23047524;23048897	-	23039384	23048897	cassetteExon	0.5	100	100	ENSMUST00000092665.12	ENSMUSG00000010461.17	Eya4	chr10	protein_coding	EYA transcriptional coactivator and phosphatase 4
chr10	23046280	23048897	-	23039384	23048897	A3SS	0.33	50	50	ENSMUST00000092665.12	ENSMUSG00000010461.17	Eya4	chr10	protein_coding	EYA transcriptional coactivator and phosphatase 4
chr10	23049021	23061149	-	23049021	23102700	A5SS	0.5	50	50	ENSMUST00000092665.12	ENSMUSG00000010461.17	Eya4	chr10	protein_coding	EYA transcriptional coactivator and phosphatase 4
chr10	23102749	23112728	-	23102749	23198946	A5SS	0.5	50	50	ENSMUST00000092665.12	ENSMUSG00000010461.17	Eya4	chr10	protein_coding	EYA transcriptional coactivator and phosphatase 4
chr10	23046280	23048897	-	23047592	23048897	A3SS&ES	0.33	50	50	ENSMUST00000219315.2	ENSMUSG00000010461.17	Eya4	chr10	protein_coding	EYA transcriptional coactivator and phosphatase 4
chr10	23059513	23061149	-	23049021	23061149	A3SS	0.5	50	50	ENSMUST00000220038.2	ENSMUSG00000010461.17	Eya4	chr10	protein_coding	EYA transcriptional coactivator and phosphatase 4
chr10	23489779	23498019	-	23487528	23498019	A3SS	0.5	50	50	ENSMUST00000219658.2	ENSMUSG00000112868.2	4930520K02Rik	chr10	lncRNA	RIKEN cDNA 4930520K02 gene
chr10	23661902	23662662	-	23661902	23662523	A5SS	0.5	50	50	ENSMUST00000218142.2	ENSMUSG00000061983.8	Rps12	chr10	protein_coding	ribosomal protein S12
chr10	23662778	23663054	-	23662778;23662942	23662892;23663054	ES	0.5	50	50	ENSMUST00000218107.2	ENSMUSG00000061983.8	Rps12	chr10	protein_coding	ribosomal protein S12
chr10	23661902;23662537	23662523;23662662	-	23661902	23662662	cassetteExon	0.5	100	100	ENSMUST00000218107.2	ENSMUSG00000061983.8	Rps12	chr10	protein_coding	ribosomal protein S12
chr10	23662778	23663054	-	23662778	23662892	5pMXE	0.5	50	50	ENSMUST00000220070.2	ENSMUSG00000061983.8	Rps12	chr10	protein_coding	ribosomal protein S12
chr10	23662778	23663054	-	23662942	23663054	A3SS	0.5	50	50	ENSMUST00000217883.2	ENSMUSG00000061983.8	Rps12	chr10	protein_coding	ribosomal protein S12
chr10	23681938	23692191	+	23681938;23686843	23686687;23692191	ES	0.5	50	50	ENSMUST00000119597.8	ENSMUSG00000037455.17	Slc18b1	chr10	protein_coding	solute carrier family 18, subfamily B, member 1
chr10	23680159;23681043	23680936;23681791	+	23680159	23681791	cassetteExon	0.5	100	100	ENSMUST00000119597.8	ENSMUSG00000037455.17	Slc18b1	chr10	protein_coding	solute carrier family 18, subfamily B, member 1
chr10	23686843	23692185	+	23686843	23692191	A3SS	0.5	50	50	ENSMUST00000119597.8	ENSMUSG00000037455.17	Slc18b1	chr10	protein_coding	solute carrier family 18, subfamily B, member 1
chr10	23673205	23674644	+	23673081	23674644	A5SS	0.5	50	50	ENSMUST00000119597.8	ENSMUSG00000037455.17	Slc18b1	chr10	protein_coding	solute carrier family 18, subfamily B, member 1
chr10	23681938	23692191	+	23681938	23686687	A3SS&ES	0.5	50	50	ENSMUST00000179321.8	ENSMUSG00000037455.17	Slc18b1	chr10	protein_coding	solute carrier family 18, subfamily B, member 1
chr10	23773321	23774328	+	23773321	23774306	A3SS	0.5	50	50	ENSMUST00000041416.8	ENSMUSG00000037440.9	Vnn1	chr10	protein_coding	vanin 1
chr10	24025624	24031133	+	24025306	24031133	A5SS	0.33	50	50	ENSMUST00000218050.2	ENSMUSG00000019998.7	Stx7	chr10	protein_coding	syntaxin 7
chr10	24028487	24031133	+	24025306	24031133	A5SS	0.33	50	50	ENSMUST00000218050.2	ENSMUSG00000019998.7	Stx7	chr10	protein_coding	syntaxin 7
chr10	24028487	24031133	+	24025624	24031133	A5SS	0.33	50	50	ENSMUST00000020174.7	ENSMUSG00000019998.7	Stx7	chr10	protein_coding	syntaxin 7
chr10	24099765	24106990	+	24099765	24120138	A3SS	0.5	50	50	ENSMUST00000095784.3	ENSMUSG00000020000.8	Moxd1	chr10	protein_coding	monooxygenase, DBH-like 1
chr10	24425485	24456006	-	24425485	24425589	5pMXE	0.5	50	50	ENSMUST00000146208.2	ENSMUSG00000087400.9	Gm15270	chr10	lncRNA	predicted gene 15270
chr10	24459180	24469497	-	24459180	24471539	A5SS	0.5	50	50	ENSMUST00000136908.8	ENSMUSG00000087400.9	Gm15270	chr10	lncRNA	predicted gene 15270
chr10	24527297	24528733	-	24527294	24528733	A3SS	0.5	50	50	ENSMUST00000105520.8	ENSMUSG00000037370.14	Enpp1	chr10	protein_coding	ectonucleotide pyrophosphatase/phosphodiesterase 1
chr10	24540499	24540809	-	24540525	24540809	A3SS	0.5	50	50	ENSMUST00000105520.8	ENSMUSG00000037370.14	Enpp1	chr10	protein_coding	ectonucleotide pyrophosphatase/phosphodiesterase 1
chr10	24693862	24700701	-	24693862;24696530	24696470;24700701	ES	0.5	50	50	ENSMUST00000020169.9	ENSMUSG00000019989.9	Enpp3	chr10	protein_coding	ectonucleotide pyrophosphatase/phosphodiesterase 3
chr10	24702196	24711914	-	24702196;24707704	24707629;24711914	ES	0.5	50	50	ENSMUST00000020169.9	ENSMUSG00000019989.9	Enpp3	chr10	protein_coding	ectonucleotide pyrophosphatase/phosphodiesterase 3
chr10	24707704	24718597	-	24707704	24711914	5pMXE	0.5	50	50	ENSMUST00000020169.9	ENSMUSG00000019989.9	Enpp3	chr10	protein_coding	ectonucleotide pyrophosphatase/phosphodiesterase 3
chr10	24653869;24654146	24654001;24654591	-	24653869	24654591	cassetteExon	0.5	100	100	ENSMUST00000020169.9	ENSMUSG00000019989.9	Enpp3	chr10	protein_coding	ectonucleotide pyrophosphatase/phosphodiesterase 3
chr10	24653869	24654536	-	24653869	24654591	A5SS	0.33	50	50	ENSMUST00000020169.9	ENSMUSG00000019989.9	Enpp3	chr10	protein_coding	ectonucleotide pyrophosphatase/phosphodiesterase 3
chr10	24654723	24660296	-	24654723	24660688	A5SS	0.5	50	50	ENSMUST00000020169.9	ENSMUSG00000019989.9	Enpp3	chr10	protein_coding	ectonucleotide pyrophosphatase/phosphodiesterase 3
chr10	24653869	24654001	-	24653869	24654536	A5SS	0.33	50	50	ENSMUST00000219861.2	ENSMUSG00000019989.9	Enpp3	chr10	protein_coding	ectonucleotide pyrophosphatase/phosphodiesterase 3
chr10	24702196	24711914	-	24702196	24707629	5pMXE	0.33	50	50	ENSMUST00000217903.2	ENSMUSG00000019989.9	Enpp3	chr10	protein_coding	ectonucleotide pyrophosphatase/phosphodiesterase 3
chr10	24702196	24718597	-	24702196	24707629	5pMXE	0.33	50	50	ENSMUST00000217903.2	ENSMUSG00000019989.9	Enpp3	chr10	protein_coding	ectonucleotide pyrophosphatase/phosphodiesterase 3
chr10	24702196;24707704	24707629;24718597	-	24702196	24718597	cassetteExon	0.5	100	100	ENSMUST00000219342.2	ENSMUSG00000019989.9	Enpp3	chr10	protein_coding	ectonucleotide pyrophosphatase/phosphodiesterase 3
chr10	24702196	24711914	-	24702196	24718597	A5SS	0.33	50	50	ENSMUST00000219342.2	ENSMUSG00000019989.9	Enpp3	chr10	protein_coding	ectonucleotide pyrophosphatase/phosphodiesterase 3
chr10	24693862	24700701	-	24696530	24700701	3pMXE	0.5	50	50	ENSMUST00000220209.2	ENSMUSG00000019989.9	Enpp3	chr10	protein_coding	ectonucleotide pyrophosphatase/phosphodiesterase 3
chr10	24758547	24764298	+	24758547;24759119	24759102;24764298	ES	0.33	50	50	ENSMUST00000092646.13	ENSMUSG00000019984.17	Med23	chr10	protein_coding	mediator complex subunit 23
chr10	24764498	24768412	+	24764498;24767160	24767017;24768412	ES	0.5	50	50	ENSMUST00000092646.13	ENSMUSG00000019984.17	Med23	chr10	protein_coding	mediator complex subunit 23
chr10	24746649;24746817	24746737;24749371	+	24746649	24749371	cassetteExon	0.5	100	100	ENSMUST00000092646.13	ENSMUSG00000019984.17	Med23	chr10	protein_coding	mediator complex subunit 23
chr10	24779591	24780159	+	24779729	24780159	A5SS	0.5	50	50	ENSMUST00000092646.13	ENSMUSG00000019984.17	Med23	chr10	protein_coding	mediator complex subunit 23
chr10	24768557	24773083	+	24768557	24769513	3pMXE	0.5	50	50	ENSMUST00000177522.8	ENSMUSG00000019984.17	Med23	chr10	protein_coding	mediator complex subunit 23
chr10	24755683	24764298	+	24755683;24758547	24758452;24764298	ES	0.33	50	50	ENSMUST00000177232.8	ENSMUSG00000019984.17	Med23	chr10	protein_coding	mediator complex subunit 23
chr10	24771746	24773083	+	24768557	24773083	A5SS	0.5	50	50	ENSMUST00000176827.8	ENSMUSG00000019984.17	Med23	chr10	protein_coding	mediator complex subunit 23
chr10	24759119	24764298	+	24755683	24764298	A5SS	0.33	50	50	ENSMUST00000176502.2	ENSMUSG00000019984.17	Med23	chr10	protein_coding	mediator complex subunit 23
chr10	24764498	24768412	+	24767160	24768412	5pMXE	0.5	50	50	ENSMUST00000175786.2	ENSMUSG00000019984.17	Med23	chr10	protein_coding	mediator complex subunit 23
chr10	24875956	24892211	+	24875956	24906295	A3SS	0.5	50	50	ENSMUST00000218700.2	ENSMUSG00000111970.2	Gm47715	chr10	lncRNA	predicted gene, 47715
chr10	24905450	24906295	+	24875956	24906295	A5SS	0.5	50	50	ENSMUST00000218700.2	ENSMUSG00000111970.2	Gm47715	chr10	lncRNA	predicted gene, 47715
chr10	25047146	25096509	-	25047146	25075895	5pMXE	0.5	50	50	ENSMUST00000100012.3	ENSMUSG00000039166.17	Akap7	chr10	protein_coding	A kinase (PRKA) anchor protein 7
chr10	25096656	25115524	-	25096656	25114532	5pMXE	0.5	50	50	ENSMUST00000175979.2	ENSMUSG00000039166.17	Akap7	chr10	protein_coding	A kinase (PRKA) anchor protein 7
chr10	25046300	25096509	-	25047146	25096509	A3SS	0.5	50	50	ENSMUST00000175979.2	ENSMUSG00000039166.17	Akap7	chr10	protein_coding	A kinase (PRKA) anchor protein 7
chr10	25165628	25183683	-	25165628	25174938	5pMXE	0.2	50	50	ENSMUST00000041984.14	ENSMUSG00000039166.17	Akap7	chr10	protein_coding	A kinase (PRKA) anchor protein 7
chr10	25165628;25174126	25174033;25174938	-	25165628	25174938	cassetteExon	0.5	100	100	ENSMUST00000041984.14	ENSMUSG00000039166.17	Akap7	chr10	protein_coding	A kinase (PRKA) anchor protein 7
chr10	25155702	25159791	-	25147539	25159791	A3SS	0.5	50	50	ENSMUST00000041984.14	ENSMUSG00000039166.17	Akap7	chr10	protein_coding	A kinase (PRKA) anchor protein 7
chr10	25165628	25171796	-	25165628	25174938	A5SS	0.2	50	50	ENSMUST00000041984.14	ENSMUSG00000039166.17	Akap7	chr10	protein_coding	A kinase (PRKA) anchor protein 7
chr10	25165628	25172826	-	25165628	25174938	A5SS	0.2	50	50	ENSMUST00000041984.14	ENSMUSG00000039166.17	Akap7	chr10	protein_coding	A kinase (PRKA) anchor protein 7
chr10	25165628	25172826	-	25165628	25171796	5pMXE	0.2	50	50	ENSMUST00000176258.8	ENSMUSG00000039166.17	Akap7	chr10	protein_coding	A kinase (PRKA) anchor protein 7
chr10	25165628	25174033	-	25165628	25171796	5pMXE	0.2	50	50	ENSMUST00000176258.8	ENSMUSG00000039166.17	Akap7	chr10	protein_coding	A kinase (PRKA) anchor protein 7
chr10	25165628	25183683	-	25165628	25171796	5pMXE	0.2	50	50	ENSMUST00000176258.8	ENSMUSG00000039166.17	Akap7	chr10	protein_coding	A kinase (PRKA) anchor protein 7
chr10	25165628	25172826	-	25165628	25174033	A5SS	0.25	50	50	ENSMUST00000095779.11	ENSMUSG00000039166.17	Akap7	chr10	protein_coding	A kinase (PRKA) anchor protein 7
chr10	25165628	25183683	-	25165628	25172826	5pMXE	0.2	50	50	ENSMUST00000177124.2	ENSMUSG00000039166.17	Akap7	chr10	protein_coding	A kinase (PRKA) anchor protein 7
chr10	25165628	25174033	-	25165628	25183683	A5SS	0.2	50	50	ENSMUST00000176231.2	ENSMUSG00000039166.17	Akap7	chr10	protein_coding	A kinase (PRKA) anchor protein 7
chr10	25378285	25382073	+	25378285;25380157	25380035;25382073	ES	0.33	50	50	ENSMUST00000053748.16	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25380157	25383675	+	25380157;25382171	25382073;25383675	ES	0.5	50	50	ENSMUST00000053748.16	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25371489;25377529	25377476;25377722	+	25371489	25377722	cassetteExon	0.5	100	100	ENSMUST00000053748.16	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25371489;25377529	25377476;25380035	+	25371489;25378285	25377722;25380035	MXE	0.5	100	100	ENSMUST00000053748.16	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25364991	25366608	+	25364991	25369465	A3SS	0.25	50	50	ENSMUST00000053748.16	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25364991	25375674	+	25364991	25369465	A3SS&ES	0.25	50	50	ENSMUST00000053748.16	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25371489	25375674	+	25371489	25377722	A3SS	0.33	50	50	ENSMUST00000053748.16	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25274769	25317471	+	25235879	25317471	A5SS	0.16	50	50	ENSMUST00000053748.16	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25279407	25317471	+	25235879	25317471	A5SS	0.16	50	50	ENSMUST00000053748.16	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25284340	25317471	+	25235879	25317471	A5SS	0.16	50	50	ENSMUST00000053748.16	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25308760	25317471	+	25235879	25317471	A5SS	0.16	50	50	ENSMUST00000053748.16	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25308781	25317471	+	25235879	25317471	A5SS	0.16	50	50	ENSMUST00000053748.16	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25342940	25343994	+	25336794	25343994	A5SS	0.5	50	50	ENSMUST00000053748.16	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25369225	25369465	+	25364991	25369465	A5SS	0.5	50	50	ENSMUST00000053748.16	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25378036	25382073	+	25380157	25382073	A5SS&ES	0.33	50	50	ENSMUST00000053748.16	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25388983	25398195	+	25388979	25398195	A5SS	0.5	50	50	ENSMUST00000053748.16	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25364991	25366608	+	25364991	25377722	A3SS	0.25	50	50	ENSMUST00000218903.2	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25364991	25369465	+	25364991	25377722	A3SS	0.25	50	50	ENSMUST00000218903.2	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25364991	25375674	+	25364991	25377722	A3SS	0.25	50	50	ENSMUST00000218903.2	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25371489	25377722	+	25364991	25377722	A5SS	0.33	50	50	ENSMUST00000218903.2	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25377529	25377722	+	25364991	25377722	A5SS	0.33	50	50	ENSMUST00000218903.2	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25377529	25380035	+	25378285	25380035	A5SS&ES	0.5	50	50	ENSMUST00000218903.2	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25279407	25317471	+	25274769	25317471	A5SS	0.16	50	50	ENSMUST00000219900.2	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25284340	25317471	+	25274769	25317471	A5SS	0.16	50	50	ENSMUST00000219900.2	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25308760	25317471	+	25274769	25317471	A5SS	0.16	50	50	ENSMUST00000219900.2	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25308781	25317471	+	25274769	25317471	A5SS	0.16	50	50	ENSMUST00000219900.2	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25284340	25317471	+	25279407	25317471	A5SS	0.16	50	50	ENSMUST00000219967.2	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25308760	25317471	+	25279407	25317471	A5SS	0.16	50	50	ENSMUST00000219967.2	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25308781	25317471	+	25279407	25317471	A5SS	0.16	50	50	ENSMUST00000219967.2	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25308760	25317471	+	25284340	25317471	A5SS	0.16	50	50	ENSMUST00000092645.7	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25308781	25317471	+	25284340	25317471	A5SS	0.16	50	50	ENSMUST00000092645.7	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25308781	25317471	+	25308760	25317471	A5SS	0.16	50	50	ENSMUST00000219224.2	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25378285	25382073	+	25378036	25382073	A5SS	0.33	50	50	ENSMUST00000217929.2	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25380157	25383675	+	25382171	25383675	A5SS&ES	0.5	50	50	ENSMUST00000217929.2	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25364991	25375674	+	25364991	25366608	3pMXE	0.25	50	50	ENSMUST00000220121.2	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25377529	25380035	+	25377529	25377722	3pMXE	0.5	50	50	ENSMUST00000219138.2	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25371489	25375674	+	25364991	25375674	A5SS	0.5	50	50	ENSMUST00000219138.2	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25371489	25377476	+	25375841	25377476	A5SS&ES	0.5	50	50	ENSMUST00000219138.2	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25371489	25377722	+	25377529	25377722	A5SS&ES	0.33	50	50	ENSMUST00000219138.2	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25371489;25375841	25375674;25377476	+	25371489	25377476	cassetteExon	0.5	100	100	ENSMUST00000220290.2	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25371489	25377722	+	25371489	25377476	A3SS&ES	0.33	50	50	ENSMUST00000220290.2	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25378285	25382073	+	25378285	25380035	3pMXE	0.5	50	50	ENSMUST00000218345.2	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25378285;25380157	25380035;25383675	+	25378285;25382171	25382073;25383675	MXE	0.5	100	100	ENSMUST00000219372.2	ENSMUSG00000019978.17	Epb41l2	chr10	protein_coding	erythrocyte membrane protein band 4.1 like 2
chr10	25870283	25954036	-	25806606	25954036	A3SS	0.25	50	50	ENSMUST00000217910.2	ENSMUSG00000049420.10	Tmem200a	chr10	protein_coding	transmembrane protein 200A
chr10	25908753	25954036	-	25806606	25954036	A3SS	0.25	50	50	ENSMUST00000217910.2	ENSMUSG00000049420.10	Tmem200a	chr10	protein_coding	transmembrane protein 200A
chr10	25913594	25954036	-	25806606	25954036	A3SS	0.25	50	50	ENSMUST00000217910.2	ENSMUSG00000049420.10	Tmem200a	chr10	protein_coding	transmembrane protein 200A
chr10	25870283;25908753	25908673;25954036	-	25870283	25954036	cassetteExon	0.5	100	100	ENSMUST00000218232.2	ENSMUSG00000049420.10	Tmem200a	chr10	protein_coding	transmembrane protein 200A
chr10	25870283;25913594	25913526;25954036	-	25870283	25954036	cassetteExon	0.5	100	100	ENSMUST00000218232.2	ENSMUSG00000049420.10	Tmem200a	chr10	protein_coding	transmembrane protein 200A
chr10	25870283	25893403	-	25870283	25954036	A5SS	0.25	50	50	ENSMUST00000218232.2	ENSMUSG00000049420.10	Tmem200a	chr10	protein_coding	transmembrane protein 200A
chr10	25870283	25908673	-	25870283	25893403	5pMXE	0.25	50	50	ENSMUST00000219651.2	ENSMUSG00000049420.10	Tmem200a	chr10	protein_coding	transmembrane protein 200A
chr10	25870283	25913526	-	25870283	25893403	5pMXE	0.25	50	50	ENSMUST00000219651.2	ENSMUSG00000049420.10	Tmem200a	chr10	protein_coding	transmembrane protein 200A
chr10	25870283;25913594	25913526;25954036	-	25870283;25908753	25908673;25954036	MXE	0.5	100	100	ENSMUST00000219338.2	ENSMUSG00000049420.10	Tmem200a	chr10	protein_coding	transmembrane protein 200A
chr10	26109525	26121442	+	26109525;26120564	26120379;26121442	ES	0.5	50	50	ENSMUST00000218301.2	ENSMUSG00000051354.15	Samd3	chr10	protein_coding	sterile alpha motif domain containing 3
chr10	26127814	26139680	+	26127814	26135023	3pMXE	0.5	50	50	ENSMUST00000218301.2	ENSMUSG00000051354.15	Samd3	chr10	protein_coding	sterile alpha motif domain containing 3
chr10	26146159	26147593	+	26146159;26147386	26147304;26147593	ES	0.5	50	50	ENSMUST00000060716.6	ENSMUSG00000051354.15	Samd3	chr10	protein_coding	sterile alpha motif domain containing 3
chr10	26228273	26251106	-	26228273	26249697	5pMXE	0.33	50	50	ENSMUST00000105519.10	ENSMUSG00000039089.16	L3mbtl3	chr10	protein_coding	L3MBTL3 histone methyl-lysine binding protein
chr10	26228273	26251907	-	26228273	26249697	5pMXE	0.33	50	50	ENSMUST00000105519.10	ENSMUSG00000039089.16	L3mbtl3	chr10	protein_coding	L3MBTL3 histone methyl-lysine binding protein
chr10	26218565;26220149	26220075;26220510	-	26218565	26220510	cassetteExon	0.5	100	100	ENSMUST00000105519.10	ENSMUSG00000039089.16	L3mbtl3	chr10	protein_coding	L3MBTL3 histone methyl-lysine binding protein
chr10	26189855	26189934	-	26189855	26191390	A5SS	0.33	50	50	ENSMUST00000105519.10	ENSMUSG00000039089.16	L3mbtl3	chr10	protein_coding	L3MBTL3 histone methyl-lysine binding protein
chr10	26189855	26190410	-	26189855	26191390	A5SS	0.33	50	50	ENSMUST00000105519.10	ENSMUSG00000039089.16	L3mbtl3	chr10	protein_coding	L3MBTL3 histone methyl-lysine binding protein
chr10	26189855	26190410	-	26189855	26189934	5pMXE	0.33	50	50	ENSMUST00000218585.2	ENSMUSG00000039089.16	L3mbtl3	chr10	protein_coding	L3MBTL3 histone methyl-lysine binding protein
chr10	26228273	26251907	-	26228273	26251106	5pMXE	0.33	50	50	ENSMUST00000174766.2	ENSMUSG00000039089.16	L3mbtl3	chr10	protein_coding	L3MBTL3 histone methyl-lysine binding protein
chr10	26648692	26721928	+	26629498	26721928	A5SS	0.33	50	50	ENSMUST00000176060.8	ENSMUSG00000039031.17	Arhgap18	chr10	protein_coding	Rho GTPase activating protein 18
chr10	26698647	26721928	+	26629498	26721928	A5SS	0.33	50	50	ENSMUST00000176060.8	ENSMUSG00000039031.17	Arhgap18	chr10	protein_coding	Rho GTPase activating protein 18
chr10	26698647	26721928	+	26648692	26721928	A5SS	0.33	50	50	ENSMUST00000039557.9	ENSMUSG00000039031.17	Arhgap18	chr10	protein_coding	Rho GTPase activating protein 18
chr10	26739438	26745917	+	26736728	26745917	A5SS	0.5	50	50	ENSMUST00000039557.9	ENSMUSG00000039031.17	Arhgap18	chr10	protein_coding	Rho GTPase activating protein 18
chr10	26894523	26899268	-	26894523;26897468	26897457;26899268	ES	0.5	50	50	ENSMUST00000092639.12	ENSMUSG00000019899.18	Lama2	chr10	protein_coding	laminin, alpha 2
chr10	26926348	26930499	-	26926348;26929029	26929024;26930499	ES	0.5	50	50	ENSMUST00000092639.12	ENSMUSG00000019899.18	Lama2	chr10	protein_coding	laminin, alpha 2
chr10	27343370	27495719	-	27343370	27492693	5pMXE	0.5	50	50	ENSMUST00000092639.12	ENSMUSG00000019899.18	Lama2	chr10	protein_coding	laminin, alpha 2
chr10	27080977;27083661	27083395;27084325	-	27080977	27084325	cassetteExon	0.5	100	100	ENSMUST00000092639.12	ENSMUSG00000019899.18	Lama2	chr10	protein_coding	laminin, alpha 2
chr10	27351469	27492693	-	27343370	27492693	A3SS	0.5	50	50	ENSMUST00000092639.12	ENSMUSG00000019899.18	Lama2	chr10	protein_coding	laminin, alpha 2
chr10	28436161	28442491	+	28436161;28438138	28438103;28442491	ES	0.33	50	50	ENSMUST00000166468.2	ENSMUSG00000019889.11	Ptprk	chr10	protein_coding	protein tyrosine phosphatase, receptor type, K
chr10	28427752;28430795	28430766;28436001	+	28427752	28436001	cassetteExon	0.5	100	100	ENSMUST00000166468.2	ENSMUSG00000019889.11	Ptprk	chr10	protein_coding	protein tyrosine phosphatase, receptor type, K
chr10	28438138;28440102	28440091;28442491	+	28438138	28442491	cassetteExon	0.5	100	100	ENSMUST00000166468.2	ENSMUSG00000019889.11	Ptprk	chr10	protein_coding	protein tyrosine phosphatase, receptor type, K
chr10	28372941	28374339	+	28372941	28427614	A3SS	0.5	50	50	ENSMUST00000166468.2	ENSMUSG00000019889.11	Ptprk	chr10	protein_coding	protein tyrosine phosphatase, receptor type, K
chr10	28438138	28441092	+	28438138	28442491	A3SS	0.33	50	50	ENSMUST00000166468.2	ENSMUSG00000019889.11	Ptprk	chr10	protein_coding	protein tyrosine phosphatase, receptor type, K
chr10	28462086	28462904	+	28462068	28462904	A5SS	0.5	50	50	ENSMUST00000166468.2	ENSMUSG00000019889.11	Ptprk	chr10	protein_coding	protein tyrosine phosphatase, receptor type, K
chr10	28440102	28442491	+	28436161	28442491	A5SS	0.33	50	50	ENSMUST00000218359.2	ENSMUSG00000019889.11	Ptprk	chr10	protein_coding	protein tyrosine phosphatase, receptor type, K
chr10	28438138	28441092	+	28438138	28440091	A3SS&ES	0.33	50	50	ENSMUST00000218276.2	ENSMUSG00000019889.11	Ptprk	chr10	protein_coding	protein tyrosine phosphatase, receptor type, K
chr10	28598632	28657687	+	28598632;28637609	28637151;28657687	ES	0.5	50	50	ENSMUST00000060409.13	ENSMUSG00000049109.16	Themis	chr10	protein_coding	thymocyte selection associated
chr10	28658738	28673479	+	28658738	28665703	3pMXE	0.25	50	50	ENSMUST00000060409.13	ENSMUSG00000049109.16	Themis	chr10	protein_coding	thymocyte selection associated
chr10	28658738	28739296	+	28658738	28665703	3pMXE	0.25	50	50	ENSMUST00000060409.13	ENSMUSG00000049109.16	Themis	chr10	protein_coding	thymocyte selection associated
chr10	28658738	28756947	+	28658738	28665703	3pMXE	0.25	50	50	ENSMUST00000060409.13	ENSMUSG00000049109.16	Themis	chr10	protein_coding	thymocyte selection associated
chr10	28598632;28609649	28609488;28637151	+	28598632	28637151	cassetteExon	0.5	100	100	ENSMUST00000060409.13	ENSMUSG00000049109.16	Themis	chr10	protein_coding	thymocyte selection associated
chr10	28658738	28756947	+	28658738;28739448	28739296;28756947	ES	0.5	50	50	ENSMUST00000056097.11	ENSMUSG00000049109.16	Themis	chr10	protein_coding	thymocyte selection associated
chr10	28658738	28673479	+	28658738	28739296	A3SS	0.25	50	50	ENSMUST00000056097.11	ENSMUSG00000049109.16	Themis	chr10	protein_coding	thymocyte selection associated
chr10	28598632	28657687	+	28598632	28637151	3pMXE	0.33	50	50	ENSMUST00000162343.2	ENSMUSG00000049109.16	Themis	chr10	protein_coding	thymocyte selection associated
chr10	28658738	28756947	+	28658738	28673479	3pMXE	0.25	50	50	ENSMUST00000105516.9	ENSMUSG00000049109.16	Themis	chr10	protein_coding	thymocyte selection associated
chr10	28609649	28614493	+	28609649	28637151	A3SS	0.5	50	50	ENSMUST00000159927.8	ENSMUSG00000049109.16	Themis	chr10	protein_coding	thymocyte selection associated
chr10	28598632	28609488	+	28598632	28657687	A3SS	0.33	50	50	ENSMUST00000161345.2	ENSMUSG00000049109.16	Themis	chr10	protein_coding	thymocyte selection associated
chr10	28860010	28861988	-	28860010	28860940	5pMXE	0.5	50	50	ENSMUST00000140558.8	ENSMUSG00000015519.13	2310057J18Rik	chr10	protein_coding	RIKEN cDNA 2310057J18 gene
chr10	28849897	28857482	-	28850084	28857482	A3SS	0.5	50	50	ENSMUST00000140558.8	ENSMUSG00000015519.13	2310057J18Rik	chr10	protein_coding	RIKEN cDNA 2310057J18 gene
chr10	29023749	29026240	+	29023749;29024405	29024181;29026240	ES	0.5	50	50	ENSMUST00000092629.4	ENSMUSG00000038916.8	Soga3	chr10	protein_coding	SOGA family member 3
chr10	29057029	29072222	+	29057029	29072261	A3SS	0.5	50	50	ENSMUST00000092629.4	ENSMUSG00000038916.8	Soga3	chr10	protein_coding	SOGA family member 3
chr10	29020332	29022560	+	29020431	29022560	A5SS	0.5	50	50	ENSMUST00000092629.4	ENSMUSG00000038916.8	Soga3	chr10	protein_coding	SOGA family member 3
chr10	29023823	29024181	+	29023749	29024181	A5SS	0.5	50	50	ENSMUST00000092629.4	ENSMUSG00000038916.8	Soga3	chr10	protein_coding	SOGA family member 3
chr10	29087862	29094051	+	29075276	29094051	A5SS	0.5	50	50	ENSMUST00000217011.2	ENSMUSG00000110723.2	Gm49353	chr10	protein_coding	predicted gene, 49353
chr10	29098296;29099401	29099330;29100231	+	29098296	29100231	cassetteExon	0.5	100	100	ENSMUST00000092627.6	ENSMUSG00000004360.10	9330159F19Rik	chr10	protein_coding	RIKEN cDNA 9330159F19 gene
chr10	29087862	29094037	+	29087862	29094051	A3SS	0.5	50	50	ENSMUST00000092627.6	ENSMUSG00000004360.10	9330159F19Rik	chr10	protein_coding	RIKEN cDNA 9330159F19 gene
chr10	29210267	29210462	+	29210267	29220337	A3SS	0.5	50	50	ENSMUST00000160399.8	ENSMUSG00000019883.12	Echdc1	chr10	protein_coding	enoyl Coenzyme A hydratase domain containing 1
chr10	29189360	29193503	+	29189293	29193503	A5SS	0.33	50	50	ENSMUST00000160399.8	ENSMUSG00000019883.12	Echdc1	chr10	protein_coding	enoyl Coenzyme A hydratase domain containing 1
chr10	29189729	29193503	+	29189293	29193503	A5SS	0.33	50	50	ENSMUST00000160399.8	ENSMUSG00000019883.12	Echdc1	chr10	protein_coding	enoyl Coenzyme A hydratase domain containing 1
chr10	29189729	29193503	+	29189360	29193503	A5SS	0.33	50	50	ENSMUST00000161605.8	ENSMUSG00000019883.12	Echdc1	chr10	protein_coding	enoyl Coenzyme A hydratase domain containing 1
chr10	29230443;29237341	29237281;29237980	-	29230443	29237980	cassetteExon	0.5	100	100	ENSMUST00000160144.9	ENSMUSG00000038876.13	Rnf146	chr10	protein_coding	ring finger protein 146
chr10	29230443	29233658	-	29230443	29237980	A5SS	0.25	50	50	ENSMUST00000160144.9	ENSMUSG00000038876.13	Rnf146	chr10	protein_coding	ring finger protein 146
chr10	29230443	29237960	-	29230443	29237980	A5SS	0.25	50	50	ENSMUST00000160144.9	ENSMUSG00000038876.13	Rnf146	chr10	protein_coding	ring finger protein 146
chr10	29230443	29237960	-	29230443;29237341	29237281;29237960	ES	0.5	50	50	ENSMUST00000037548.11	ENSMUSG00000038876.13	Rnf146	chr10	protein_coding	ring finger protein 146
chr10	29230443	29233658	-	29230443	29237281	A5SS	0.25	50	50	ENSMUST00000037548.11	ENSMUSG00000038876.13	Rnf146	chr10	protein_coding	ring finger protein 146
chr10	29230443	29237980	-	29230443	29237281	A5SS&ES	0.25	50	50	ENSMUST00000037548.11	ENSMUSG00000038876.13	Rnf146	chr10	protein_coding	ring finger protein 146
chr10	29237341	29237980	-	29237341	29237960	A5SS	0.5	50	50	ENSMUST00000037548.11	ENSMUSG00000038876.13	Rnf146	chr10	protein_coding	ring finger protein 146
chr10	29230443	29233658	-	29230443	29237960	A5SS	0.25	50	50	ENSMUST00000160372.9	ENSMUSG00000038876.13	Rnf146	chr10	protein_coding	ring finger protein 146
chr10	29230443	29237960	-	29230443	29237281	A5SS&ES	0.25	50	50	ENSMUST00000214896.2	ENSMUSG00000038876.13	Rnf146	chr10	protein_coding	ring finger protein 146
chr10	29243035	29245263	+	29243035;29244015	29243911;29245263	ES	0.5	50	50	ENSMUST00000215353.2	ENSMUSG00000111646.2	Gm40621	chr10	lncRNA	predicted gene, 40621
chr10	29876609	29880353	-	29876609	29877268	5pMXE	0.5	50	50	ENSMUST00000216752.2	ENSMUSG00000111195.2	Gm48215	chr10	lncRNA	predicted gene, 48215
chr10	30442502	30466021	-	30442502;30463591	30463435;30466021	ES	0.5	50	50	ENSMUST00000019927.7	ENSMUSG00000019792.9	Trmt11	chr10	protein_coding	tRNA methyltransferase 11
chr10	30466931	30470111	-	30466931;30467098	30467017;30470111	ES	0.5	50	50	ENSMUST00000019927.7	ENSMUSG00000019792.9	Trmt11	chr10	protein_coding	tRNA methyltransferase 11
chr10	30442502;30443867	30443757;30463435	-	30442502	30463435	cassetteExon	0.5	100	100	ENSMUST00000019927.7	ENSMUSG00000019792.9	Trmt11	chr10	protein_coding	tRNA methyltransferase 11
chr10	30442502	30443757	-	30442502	30466021	A5SS	0.33	50	50	ENSMUST00000215595.2	ENSMUSG00000019792.9	Trmt11	chr10	protein_coding	tRNA methyltransferase 11
chr10	30466931	30470111	-	30467098	30470111	A3SS	0.5	50	50	ENSMUST00000216705.2	ENSMUSG00000019792.9	Trmt11	chr10	protein_coding	tRNA methyltransferase 11
chr10	30490826	30505320	-	30490826	30494199	5pMXE	0.5	50	50	ENSMUST00000161074.8	ENSMUSG00000019791.13	Hint3	chr10	protein_coding	histidine triad nucleotide binding protein 3
chr10	30487713;30489368	30489274;30490709	-	30487713	30490709	cassetteExon	0.5	100	100	ENSMUST00000161074.8	ENSMUSG00000019791.13	Hint3	chr10	protein_coding	histidine triad nucleotide binding protein 3
chr10	30486457	30487644	-	30486439	30487644	A3SS	0.5	50	50	ENSMUST00000161074.8	ENSMUSG00000019791.13	Hint3	chr10	protein_coding	histidine triad nucleotide binding protein 3
chr10	30505397	30507809	-	30505397	30505528	5pMXE	0.5	50	50	ENSMUST00000216617.2	ENSMUSG00000019791.13	Hint3	chr10	protein_coding	histidine triad nucleotide binding protein 3
chr10	30530438	30538290	-	30530438	30531633	5pMXE	0.5	50	50	ENSMUST00000213897.2	ENSMUSG00000039697.17	Ncoa7	chr10	protein_coding	nuclear receptor coactivator 7
chr10	30523647	30524441	-	30512555	30524441	A3SS	0.33	50	50	ENSMUST00000213897.2	ENSMUSG00000039697.17	Ncoa7	chr10	protein_coding	nuclear receptor coactivator 7
chr10	30524036	30524441	-	30512555	30524441	A3SS	0.33	50	50	ENSMUST00000213897.2	ENSMUSG00000039697.17	Ncoa7	chr10	protein_coding	nuclear receptor coactivator 7
chr10	30523647	30524441	-	30523647;30524036	30523963;30524441	ES	0.5	50	50	ENSMUST00000215740.2	ENSMUSG00000039697.17	Ncoa7	chr10	protein_coding	nuclear receptor coactivator 7
chr10	30572189	30577915	-	30572189;30574239	30574126;30577915	ES	0.5	50	50	ENSMUST00000215740.2	ENSMUSG00000039697.17	Ncoa7	chr10	protein_coding	nuclear receptor coactivator 7
chr10	30567750	30570065	-	30567783	30570065	A3SS	0.5	50	50	ENSMUST00000215740.2	ENSMUSG00000039697.17	Ncoa7	chr10	protein_coding	nuclear receptor coactivator 7
chr10	30572189	30574142	-	30572189	30574126	A5SS	0.33	50	50	ENSMUST00000215740.2	ENSMUSG00000039697.17	Ncoa7	chr10	protein_coding	nuclear receptor coactivator 7
chr10	30523647	30524441	-	30524036	30524441	A3SS	0.33	50	50	ENSMUST00000217644.2	ENSMUSG00000039697.17	Ncoa7	chr10	protein_coding	nuclear receptor coactivator 7
chr10	30572189;30574239	30574142;30577915	-	30572189	30577915	cassetteExon	0.5	100	100	ENSMUST00000215926.2	ENSMUSG00000039697.17	Ncoa7	chr10	protein_coding	nuclear receptor coactivator 7
chr10	30905252	30911006	-	30886549	30911006	A3SS	0.5	50	50	ENSMUST00000214464.2	ENSMUSG00000111778.2	Gm30676	chr10	lncRNA	predicted gene, 30676
chr10	30920069	30942143	-	30918044	30942143	A3SS	0.5	50	50	ENSMUST00000214464.2	ENSMUSG00000111778.2	Gm30676	chr10	lncRNA	predicted gene, 30676
chr10	31196332;31201271	31201202;31202018	+	31196332	31202018	cassetteExon	0.5	100	100	ENSMUST00000000304.14	ENSMUSG00000000295.14	Hddc2	chr10	protein_coding	HD domain containing 2
chr10	31208965	31217136	-	31208965;31214241	31214181;31217136	ES	0.5	50	50	ENSMUST00000000305.7	ENSMUSG00000000296.9	Tpd52l1	chr10	protein_coding	tumor protein D52-like 1
chr10	31214241	31222607	-	31214241;31217174	31217136;31222607	ES	0.25	50	50	ENSMUST00000000305.7	ENSMUSG00000000296.9	Tpd52l1	chr10	protein_coding	tumor protein D52-like 1
chr10	31217174;31219022	31219008;31222607	-	31217174	31222607	cassetteExon	0.5	100	100	ENSMUST00000000305.7	ENSMUSG00000000296.9	Tpd52l1	chr10	protein_coding	tumor protein D52-like 1
chr10	31208965;31214241	31214181;31222607	-	31208965	31222607	cassetteExon	0.5	100	100	ENSMUST00000214644.2	ENSMUSG00000000296.9	Tpd52l1	chr10	protein_coding	tumor protein D52-like 1
chr10	31208965;31217174	31217136;31222607	-	31208965	31222607	cassetteExon	0.5	100	100	ENSMUST00000214644.2	ENSMUSG00000000296.9	Tpd52l1	chr10	protein_coding	tumor protein D52-like 1
chr10	31219022	31222607	-	31208965	31222607	A3SS	0.25	50	50	ENSMUST00000214644.2	ENSMUSG00000000296.9	Tpd52l1	chr10	protein_coding	tumor protein D52-like 1
chr10	31208965;31214241	31214181;31222607	-	31208965;31217174	31217136;31222607	MXE	0.5	100	100	ENSMUST00000215515.2	ENSMUSG00000000296.9	Tpd52l1	chr10	protein_coding	tumor protein D52-like 1
chr10	31219022	31222607	-	31214241	31222607	A3SS	0.25	50	50	ENSMUST00000213639.2	ENSMUSG00000000296.9	Tpd52l1	chr10	protein_coding	tumor protein D52-like 1
chr10	31569718	31570328	-	31567683	31570328	A3SS	0.5	50	50	ENSMUST00000191234.7	ENSMUSG00000069670.9	Nkain2	chr10	protein_coding	Na+/K+ transporting ATPase interacting 2
chr10	32518377	32765639	-	32278369	32765639	A3SS	0.5	50	50	ENSMUST00000191234.7	ENSMUSG00000069670.9	Nkain2	chr10	protein_coding	Na+/K+ transporting ATPase interacting 2
chr10	32278369	32286036	-	32278369	32765639	A5SS	0.5	50	50	ENSMUST00000191234.7	ENSMUSG00000069670.9	Nkain2	chr10	protein_coding	Na+/K+ transporting ATPase interacting 2
chr10	32959741	33033009	+	32959741;33015279	33015070;33033009	ES	0.5	50	50	ENSMUST00000219982.2	ENSMUSG00000019787.10	Trdn	chr10	protein_coding	triadin
chr10	33072121	33109851	+	33072121;33076218	33076159;33109851	ES	0.5	50	50	ENSMUST00000095762.5	ENSMUSG00000019787.10	Trdn	chr10	protein_coding	triadin
chr10	33109922	33133029	+	33109922	33133071	A3SS	0.5	50	50	ENSMUST00000095762.5	ENSMUSG00000019787.10	Trdn	chr10	protein_coding	triadin
chr10	33072121	33109851	+	33072121	33076159	3pMXE	0.5	50	50	ENSMUST00000217779.2	ENSMUSG00000019787.10	Trdn	chr10	protein_coding	triadin
chr10	33102042;33131696	33131638;33132186	-	33102042	33132186	cassetteExon	0.5	100	100	ENSMUST00000217716.2	ENSMUSG00000112707.2	D830005E20Rik	chr10	lncRNA	RIKEN cDNA D830005E20 gene
chr10	33471914	33500132	-	33471914;33499054	33498540;33500132	ES	0.5	50	50	ENSMUST00000019920.13	ENSMUSG00000019785.15	Clvs2	chr10	protein_coding	clavesin 2
chr10	33469016	33471740	-	33419488	33471740	A3SS	0.5	50	50	ENSMUST00000019920.13	ENSMUSG00000019785.15	Clvs2	chr10	protein_coding	clavesin 2
chr10	33499054	33500132	-	33471914	33500132	A3SS	0.5	50	50	ENSMUST00000159533.9	ENSMUSG00000019785.15	Clvs2	chr10	protein_coding	clavesin 2
chr10	33471914	33498540	-	33471914	33500132	A5SS	0.5	50	50	ENSMUST00000159533.9	ENSMUSG00000019785.15	Clvs2	chr10	protein_coding	clavesin 2
chr10	33806340	33816154	-	33806340;33811253	33811085;33816154	ES	0.5	50	50	ENSMUST00000218055.2	ENSMUSG00000039531.9	Zup1	chr10	protein_coding	zinc finger containing ubiquitin peptidase 1
chr10	33825860;33826613	33826479;33827127	-	33825860	33827127	cassetteExon	0.5	100	100	ENSMUST00000218055.2	ENSMUSG00000039531.9	Zup1	chr10	protein_coding	zinc finger containing ubiquitin peptidase 1
chr10	33816379	33819646	-	33816275	33819646	A3SS	0.5	50	50	ENSMUST00000218055.2	ENSMUSG00000039531.9	Zup1	chr10	protein_coding	zinc finger containing ubiquitin peptidase 1
chr10	33825860	33827199	-	33825860	33827127	A5SS	0.33	50	50	ENSMUST00000218055.2	ENSMUSG00000039531.9	Zup1	chr10	protein_coding	zinc finger containing ubiquitin peptidase 1
chr10	33825860	33826479	-	33825860	33827199	A5SS	0.33	50	50	ENSMUST00000218222.2	ENSMUSG00000039531.9	Zup1	chr10	protein_coding	zinc finger containing ubiquitin peptidase 1
chr10	33848555	33851579	+	33846173	33851579	A5SS	0.5	50	50	ENSMUST00000219417.2	ENSMUSG00000111993.2	Gm48018	chr10	transcribed_unprocessed_pseudogene	predicted gene, 48018
chr10	33879832	33884989	-	33878563	33884989	A3SS	0.5	50	50	ENSMUST00000019917.6	ENSMUSG00000019782.11	Rwdd1	chr10	protein_coding	RWD domain containing 1
chr10	34029970	34031127	-	34029970	34031905	A5SS	0.5	50	50	ENSMUST00000048010.9	ENSMUSG00000039497.9	Dse	chr10	protein_coding	dermatan sulfate epimerase
chr10	34038985	34052046	-	34038985	34059688	A5SS	0.5	50	50	ENSMUST00000048010.9	ENSMUSG00000039497.9	Dse	chr10	protein_coding	dermatan sulfate epimerase
chr10	34060156	34082813	-	34060156	34083076	A5SS	0.33	50	50	ENSMUST00000048010.9	ENSMUSG00000039497.9	Dse	chr10	protein_coding	dermatan sulfate epimerase
chr10	34060156	34083587	-	34060156	34083076	A5SS	0.33	50	50	ENSMUST00000048010.9	ENSMUSG00000039497.9	Dse	chr10	protein_coding	dermatan sulfate epimerase
chr10	34060156	34082813	-	34060156	34083587	A5SS	0.33	50	50	ENSMUST00000215547.2	ENSMUSG00000039497.9	Dse	chr10	protein_coding	dermatan sulfate epimerase
chr10	34180975	34186297	-	34164558	34186297	A3SS	0.5	50	50	ENSMUST00000129363.8	ENSMUSG00000039480.15	Nt5dc1	chr10	protein_coding	5'-nucleotidase domain containing 1
chr10	34200458	34275734	-	34200458;34274191	34274110;34275734	ES	0.25	50	50	ENSMUST00000105512.8	ENSMUSG00000039480.15	Nt5dc1	chr10	protein_coding	5'-nucleotidase domain containing 1
chr10	34254036	34275734	-	34274191	34275734	A3SS&ES	0.25	50	50	ENSMUST00000105512.8	ENSMUSG00000039480.15	Nt5dc1	chr10	protein_coding	5'-nucleotidase domain containing 1
chr10	34273237	34274110	-	34200458	34274110	A3SS	0.5	50	50	ENSMUST00000105512.8	ENSMUSG00000039480.15	Nt5dc1	chr10	protein_coding	5'-nucleotidase domain containing 1
chr10	34274194	34275734	-	34274191	34275734	A3SS	0.25	50	50	ENSMUST00000105512.8	ENSMUSG00000039480.15	Nt5dc1	chr10	protein_coding	5'-nucleotidase domain containing 1
chr10	34200458	34275734	-	34200458;34274194	34274110;34275734	ES	0.25	50	50	ENSMUST00000047885.14	ENSMUSG00000039480.15	Nt5dc1	chr10	protein_coding	5'-nucleotidase domain containing 1
chr10	34254036	34275734	-	34274194	34275734	A3SS&ES	0.25	50	50	ENSMUST00000047885.14	ENSMUSG00000039480.15	Nt5dc1	chr10	protein_coding	5'-nucleotidase domain containing 1
chr10	34254036	34275734	-	34200458	34275734	A3SS	0.25	50	50	ENSMUST00000130290.2	ENSMUSG00000039480.15	Nt5dc1	chr10	protein_coding	5'-nucleotidase domain containing 1
chr10	34359628	34359741	+	34359584	34359741	A5SS	0.5	50	50	ENSMUST00000019913.15	ENSMUSG00000019779.16	Frk	chr10	protein_coding	fyn-related kinase
chr10	34757896	34812839	+	34757896	34939629	A3SS	0.5	50	50	ENSMUST00000214886.2	ENSMUSG00000111042.2	Gm18252	chr10	transcribed_processed_pseudogene	predicted gene, 18252
chr10	36504406	36704667	+	36504406;36578030	36577926;36704667	ES	0.5	50	50	ENSMUST00000167191.8	ENSMUSG00000044499.12	Hs3st5	chr10	protein_coding	heparan sulfate (glucosamine) 3-O-sulfotransferase 5
chr10	36383611;36430068	36430010;36504241	+	36383611	36504241	cassetteExon	0.5	100	100	ENSMUST00000167191.8	ENSMUSG00000044499.12	Hs3st5	chr10	protein_coding	heparan sulfate (glucosamine) 3-O-sulfotransferase 5
chr10	36504406	36684857	+	36504406	36577926	A3SS&ES	0.33	50	50	ENSMUST00000167191.8	ENSMUSG00000044499.12	Hs3st5	chr10	protein_coding	heparan sulfate (glucosamine) 3-O-sulfotransferase 5
chr10	36504406	36704667	+	36504406	36577926	3pMXE	0.33	50	50	ENSMUST00000172357.8	ENSMUSG00000044499.12	Hs3st5	chr10	protein_coding	heparan sulfate (glucosamine) 3-O-sulfotransferase 5
chr10	36504406	36684857	+	36504406	36704667	A3SS	0.33	50	50	ENSMUST00000168572.8	ENSMUSG00000044499.12	Hs3st5	chr10	protein_coding	heparan sulfate (glucosamine) 3-O-sulfotransferase 5
chr10	37017181	37024873	+	37016741	37024873	A5SS	0.5	50	50	ENSMUST00000191067.2	ENSMUSG00000046463.6	5930403N24Rik	chr10	lncRNA	RIKEN cDNA 5930403N24 gene
chr10	38996392;38997582	38997483;38998173	-	38996392	38998173	cassetteExon	0.5	100	100	ENSMUST00000063204.9	ENSMUSG00000051736.9	Fam229b	chr10	protein_coding	family with sequence similarity 229, member B
chr10	38998328	39008243	-	38998331	39008243	A3SS	0.5	50	50	ENSMUST00000063204.9	ENSMUSG00000051736.9	Fam229b	chr10	protein_coding	family with sequence similarity 229, member B
chr10	38995030	38996222	-	38995030	38996254	A5SS	0.5	50	50	ENSMUST00000063204.9	ENSMUSG00000051736.9	Fam229b	chr10	protein_coding	family with sequence similarity 229, member B
chr10	38998331	38998959	-	38998331	39008243	A5SS	0.5	50	50	ENSMUST00000063204.9	ENSMUSG00000051736.9	Fam229b	chr10	protein_coding	family with sequence similarity 229, member B
chr10	39008374	39009800	-	39008374	39009819	A5SS	0.25	50	50	ENSMUST00000063204.9	ENSMUSG00000051736.9	Fam229b	chr10	protein_coding	family with sequence similarity 229, member B
chr10	39008374	39009808	-	39008374	39009819	A5SS	0.25	50	50	ENSMUST00000063204.9	ENSMUSG00000051736.9	Fam229b	chr10	protein_coding	family with sequence similarity 229, member B
chr10	39008374	39009875	-	39008374	39009819	A5SS	0.25	50	50	ENSMUST00000063204.9	ENSMUSG00000051736.9	Fam229b	chr10	protein_coding	family with sequence similarity 229, member B
chr10	39008374	39009800	-	39008374	39009875	A5SS	0.25	50	50	ENSMUST00000139743.8	ENSMUSG00000051736.9	Fam229b	chr10	protein_coding	family with sequence similarity 229, member B
chr10	39008374	39009808	-	39008374	39009875	A5SS	0.25	50	50	ENSMUST00000139743.8	ENSMUSG00000051736.9	Fam229b	chr10	protein_coding	family with sequence similarity 229, member B
chr10	39008374	39009808	-	39008374	39009800	A5SS	0.25	50	50	ENSMUST00000134279.8	ENSMUSG00000051736.9	Fam229b	chr10	protein_coding	family with sequence similarity 229, member B
chr10	39020558	39021569	+	39020558;39020927	39020752;39021569	ES	0.5	50	50	ENSMUST00000019991.8	ENSMUSG00000019845.9	Tube1	chr10	protein_coding	tubulin, epsilon 1
chr10	39020568	39020752	+	39020558	39020752	A5SS	0.5	50	50	ENSMUST00000019991.8	ENSMUSG00000019845.9	Tube1	chr10	protein_coding	tubulin, epsilon 1
chr10	39020558	39021569	+	39020927	39021569	A5SS&ES	0.5	50	50	ENSMUST00000213898.2	ENSMUSG00000019845.9	Tube1	chr10	protein_coding	tubulin, epsilon 1
chr10	39271040	39387735	+	39271040;39331131	39331062;39387735	ES	0.5	50	50	ENSMUST00000148152.8	ENSMUSG00000019843.15	Fyn	chr10	protein_coding	Fyn proto-oncogene
chr10	39246186	39271001	+	39245061	39271001	A5SS	0.5	50	50	ENSMUST00000148152.8	ENSMUSG00000019843.15	Fyn	chr10	protein_coding	Fyn proto-oncogene
chr10	39296254	39331062	+	39271040	39331062	A5SS	0.25	50	50	ENSMUST00000148152.8	ENSMUSG00000019843.15	Fyn	chr10	protein_coding	Fyn proto-oncogene
chr10	39330845	39331062	+	39271040	39331062	A5SS	0.25	50	50	ENSMUST00000148152.8	ENSMUSG00000019843.15	Fyn	chr10	protein_coding	Fyn proto-oncogene
chr10	39330976	39331062	+	39271040	39331062	A5SS	0.25	50	50	ENSMUST00000148152.8	ENSMUSG00000019843.15	Fyn	chr10	protein_coding	Fyn proto-oncogene
chr10	39402926	39408012	+	39402926;39406070	39405915;39408012	ES	0.33	50	50	ENSMUST00000063091.13	ENSMUSG00000019843.15	Fyn	chr10	protein_coding	Fyn proto-oncogene
chr10	39402926;39405597	39405433;39408012	+	39402926;39406070	39405915;39408012	MXE	0.5	100	100	ENSMUST00000063091.13	ENSMUSG00000019843.15	Fyn	chr10	protein_coding	Fyn proto-oncogene
chr10	39409329	39409630	+	39408191	39409630	A5SS	0.5	50	50	ENSMUST00000063091.13	ENSMUSG00000019843.15	Fyn	chr10	protein_coding	Fyn proto-oncogene
chr10	39402926	39408012	+	39402926;39405597	39405433;39408012	ES	0.33	50	50	ENSMUST00000099967.10	ENSMUSG00000019843.15	Fyn	chr10	protein_coding	Fyn proto-oncogene
chr10	39330845	39331062	+	39296254	39331062	A5SS	0.25	50	50	ENSMUST00000157009.8	ENSMUSG00000019843.15	Fyn	chr10	protein_coding	Fyn proto-oncogene
chr10	39330976	39331062	+	39296254	39331062	A5SS	0.25	50	50	ENSMUST00000157009.8	ENSMUSG00000019843.15	Fyn	chr10	protein_coding	Fyn proto-oncogene
chr10	39330976	39331062	+	39330845	39331062	A5SS	0.25	50	50	ENSMUST00000135242.8	ENSMUSG00000019843.15	Fyn	chr10	protein_coding	Fyn proto-oncogene
chr10	39438458	39477701	-	39438458	39464390	5pMXE	0.5	50	50	ENSMUST00000122987.2	ENSMUSG00000086915.8	Gm16364	chr10	lncRNA	predicted gene 16364
chr10	39436132;39438458	39438359;39477701	-	39436132	39477701	cassetteExon	0.5	100	100	ENSMUST00000142723.8	ENSMUSG00000086915.8	Gm16364	chr10	lncRNA	predicted gene 16364
chr10	39472336	39477701	-	39436132	39477701	A3SS	0.33	50	50	ENSMUST00000142723.8	ENSMUSG00000086915.8	Gm16364	chr10	lncRNA	predicted gene 16364
chr10	39436132	39477701	-	39438458	39477701	3pMXE	0.33	50	50	ENSMUST00000124241.8	ENSMUSG00000086915.8	Gm16364	chr10	lncRNA	predicted gene 16364
chr10	39472336	39477701	-	39438458	39477701	A3SS	0.33	50	50	ENSMUST00000124241.8	ENSMUSG00000086915.8	Gm16364	chr10	lncRNA	predicted gene 16364
chr10	39522280	39522845	+	39521772	39522845	A5SS	0.5	50	50	ENSMUST00000019987.7	ENSMUSG00000019842.7	Traf3ip2	chr10	protein_coding	TRAF3 interacting protein 2
chr10	39498723;39515762	39515560;39516272	-	39498723;39499087	39498899;39516272	MXE	0.5	100	100	ENSMUST00000129191.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39516507;39521804	39521552;39607734	-	39516507	39607734	cassetteExon	0.5	100	100	ENSMUST00000129191.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39498723;39557545	39557469;39607734	-	39498723;39516507	39498899;39607734	MXE	0.5	100	100	ENSMUST00000129191.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39516507;39557545	39557469;39607734	-	39516507	39607734	cassetteExon	0.5	100	100	ENSMUST00000129191.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39598934	39607734	-	39516507	39607734	A3SS	0.25	50	50	ENSMUST00000129191.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39498723	39508946	-	39498723	39498899	A5SS&ES	0.25	50	50	ENSMUST00000129191.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39499087	39516376	-	39499087	39516272	A5SS	0.5	50	50	ENSMUST00000129191.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39498723;39509012	39508946;39557469	-	39498723	39557469	cassetteExon	0.5	100	100	ENSMUST00000151921.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39557545;39598934	39598805;39607734	-	39557545	39607734	cassetteExon	0.5	100	100	ENSMUST00000151921.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39516507	39557469	-	39498723	39557469	A3SS	0.25	50	50	ENSMUST00000151921.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39516507	39607734	-	39557545	39607734	A3SS&ES	0.25	50	50	ENSMUST00000151921.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39521804	39607734	-	39557545	39607734	A3SS&ES	0.25	50	50	ENSMUST00000151921.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39531925	39557469	-	39498723	39557469	A3SS	0.25	50	50	ENSMUST00000151921.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39498723	39498899	-	39498723	39557469	A5SS	0.25	50	50	ENSMUST00000151921.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39498723	39515560	-	39498723	39557469	A5SS	0.25	50	50	ENSMUST00000151921.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39498723;39499087	39498899;39516376	-	39498723;39509012	39508946;39516376	MXE	0.5	100	100	ENSMUST00000143651.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39498723;39515762	39515560;39516376	-	39498723;39509012	39508946;39516376	MXE	0.5	100	100	ENSMUST00000143651.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39498723;39557545	39557469;39607734	-	39498723;39516507	39508946;39607734	MXE	0.5	100	100	ENSMUST00000143651.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39509012;39557545	39557469;39607734	-	39509012;39516507	39516376;39607734	MXE	0.5	100	100	ENSMUST00000143651.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39498723;39509012	39508946;39557469	-	39498723;39516507	39515560;39557469	MXE	0.5	100	100	ENSMUST00000139356.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39516507;39521804	39521552;39607734	-	39516507;39557545	39557469;39607734	MXE	0.5	100	100	ENSMUST00000139356.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39531925	39557469	-	39516507	39557469	A3SS	0.25	50	50	ENSMUST00000139356.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39515762	39516376	-	39515762	39516272	A5SS	0.5	50	50	ENSMUST00000139356.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39509012;39516507	39516376;39557469	-	39509012	39557469	cassetteExon	0.5	100	100	ENSMUST00000133302.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39531925	39557469	-	39509012	39557469	A3SS	0.25	50	50	ENSMUST00000133302.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39498723	39515560	-	39498723	39508946	A5SS&ES	0.25	50	50	ENSMUST00000133302.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39498723;39499087	39498899;39516376	-	39498723;39515762	39515560;39516376	MXE	0.5	100	100	ENSMUST00000139429.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39509012	39516376	-	39499087	39516376	A3SS	0.33	50	50	ENSMUST00000153261.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39515762	39516376	-	39499087	39516376	A3SS	0.33	50	50	ENSMUST00000153261.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39499087	39516272	-	39515762	39516272	3pMXE	0.5	50	50	ENSMUST00000139891.2	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39516507	39557469	-	39516507	39521552	5pMXE	0.33	50	50	ENSMUST00000139891.2	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39516507	39607734	-	39516507	39521552	5pMXE	0.33	50	50	ENSMUST00000139891.2	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39509012	39516376	-	39515762	39516376	3pMXE	0.33	50	50	ENSMUST00000145971.2	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39598934	39607734	-	39521804	39607734	A3SS	0.25	50	50	ENSMUST00000145971.2	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39598934	39607734	-	39598934	39604122	5pMXE	0.5	50	50	ENSMUST00000136862.8	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39557545	39607734	-	39598934	39607734	3pMXE	0.25	50	50	ENSMUST00000153113.2	ENSMUSG00000087177.8	E130307A14Rik	chr10	lncRNA	RIKEN cDNA E130307A14 gene
chr10	39608609;39618814	39618687;39659139	+	39608609	39659139	cassetteExon	0.5	100	100	ENSMUST00000019986.13	ENSMUSG00000019841.16	Rev3l	chr10	protein_coding	REV3 like, DNA directed polymerase zeta catalytic subunit
chr10	39724079;39727399	39727273;39727863	+	39724079	39727863	cassetteExon	0.5	100	100	ENSMUST00000019986.13	ENSMUSG00000019841.16	Rev3l	chr10	protein_coding	REV3 like, DNA directed polymerase zeta catalytic subunit
chr10	39770936	39774910	-	39770936;39771992	39771508;39774910	ES	0.5	50	50	ENSMUST00000178045.9	ENSMUSG00000096687.9	Mfsd4b4	chr10	protein_coding	major facilitator superfamily domain containing 4B4
chr10	39770936	39774831	-	39770936	39771508	A5SS&ES	0.33	50	50	ENSMUST00000178045.9	ENSMUSG00000096687.9	Mfsd4b4	chr10	protein_coding	major facilitator superfamily domain containing 4B4
chr10	39771992	39774120	-	39771992	39774910	A5SS	0.5	50	50	ENSMUST00000178045.9	ENSMUSG00000096687.9	Mfsd4b4	chr10	protein_coding	major facilitator superfamily domain containing 4B4
chr10	39770936	39774831	-	39770936	39774910	A5SS	0.33	50	50	ENSMUST00000178563.3	ENSMUSG00000096687.9	Mfsd4b4	chr10	protein_coding	major facilitator superfamily domain containing 4B4
chr10	39775525	39783002	+	39775525	39781729	A3SS	0.5	50	50	ENSMUST00000181590.2	ENSMUSG00000097890.3	4930547M16Rik	chr10	lncRNA	RIKEN cDNA 4930547M16 gene
chr10	39801234	39812953	-	39801234	39802731	5pMXE	0.5	50	50	ENSMUST00000045526.5	ENSMUSG00000039339.5	Mfsd4b2	chr10	transcribed_unprocessed_pseudogene	major facilitator superfamily domain containing 4B2
chr10	39845969	39849588	-	39836486	39849588	A3SS	0.33	50	50	ENSMUST00000073618.13	ENSMUSG00000038528.16	Mfsd4b5	chr10	protein_coding	major facilitator superfamily domain containing 4B5
chr10	39847148	39849588	-	39836486	39849588	A3SS	0.33	50	50	ENSMUST00000073618.13	ENSMUSG00000038528.16	Mfsd4b5	chr10	protein_coding	major facilitator superfamily domain containing 4B5
chr10	39850814	39851094	-	39849704	39851094	A3SS	0.5	50	50	ENSMUST00000073618.13	ENSMUSG00000038528.16	Mfsd4b5	chr10	protein_coding	major facilitator superfamily domain containing 4B5
chr10	39851262	39862471	-	39851262	39862378	A5SS	0.5	50	50	ENSMUST00000073618.13	ENSMUSG00000038528.16	Mfsd4b5	chr10	protein_coding	major facilitator superfamily domain containing 4B5
chr10	39847148	39849588	-	39845969	39849588	A3SS	0.33	50	50	ENSMUST00000164566.8	ENSMUSG00000038528.16	Mfsd4b5	chr10	protein_coding	major facilitator superfamily domain containing 4B5
chr10	39883093	39883256	-	39882090	39883256	A3SS	0.5	50	50	ENSMUST00000163705.3	ENSMUSG00000038522.8	Mfsd4b1	chr10	protein_coding	major facilitator superfamily domain containing 4B1
chr10	39932626;39943655	39943624;39952560	-	39932626	39952560	cassetteExon	0.5	100	100	ENSMUST00000092566.8	ENSMUSG00000019838.12	Slc16a10	chr10	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 10
chr10	40009647	40017699	-	39956803	40017699	A3SS	0.5	50	50	ENSMUST00000092566.8	ENSMUSG00000019838.12	Slc16a10	chr10	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 10
chr10	40103657	40103758	-	40103657	40109104	A5SS	0.5	50	50	ENSMUST00000045114.13	ENSMUSG00000038510.13	Rpf2	chr10	protein_coding	ribosome production factor 2 homolog
chr10	40120713	40122949	-	40120713	40122539	A5SS	0.5	50	50	ENSMUST00000045114.13	ENSMUSG00000038510.13	Rpf2	chr10	protein_coding	ribosome production factor 2 homolog
chr10	40119889	40120581	-	40112200	40120581	A3SS	0.33	50	50	ENSMUST00000181995.8	ENSMUSG00000038510.13	Rpf2	chr10	protein_coding	ribosome production factor 2 homolog
chr10	40109203	40115744	-	40109203	40110818	A5SS&ES	0.33	50	50	ENSMUST00000181995.8	ENSMUSG00000038510.13	Rpf2	chr10	protein_coding	ribosome production factor 2 homolog
chr10	40112200	40115744	-	40112200	40120581	A5SS	0.5	50	50	ENSMUST00000181995.8	ENSMUSG00000038510.13	Rpf2	chr10	protein_coding	ribosome production factor 2 homolog
chr10	40112200	40115744	-	40109203	40115744	A3SS	0.5	50	50	ENSMUST00000183052.8	ENSMUSG00000038510.13	Rpf2	chr10	protein_coding	ribosome production factor 2 homolog
chr10	40112200	40120581	-	40109203	40120581	A3SS	0.33	50	50	ENSMUST00000183114.2	ENSMUSG00000038510.13	Rpf2	chr10	protein_coding	ribosome production factor 2 homolog
chr10	40119889	40120581	-	40109203	40120581	A3SS	0.33	50	50	ENSMUST00000183114.2	ENSMUSG00000038510.13	Rpf2	chr10	protein_coding	ribosome production factor 2 homolog
chr10	40109203	40110818	-	40109203	40120581	A5SS	0.33	50	50	ENSMUST00000183114.2	ENSMUSG00000038510.13	Rpf2	chr10	protein_coding	ribosome production factor 2 homolog
chr10	40109203	40115744	-	40109203	40120581	A5SS	0.33	50	50	ENSMUST00000183114.2	ENSMUSG00000038510.13	Rpf2	chr10	protein_coding	ribosome production factor 2 homolog
chr10	40133289	40133913	-	40133289	40133575	5pMXE	0.2	50	50	ENSMUST00000217537.2	ENSMUSG00000019837.9	Gtf3c6	chr10	protein_coding	general transcription factor IIIC, polypeptide 6, alpha
chr10	40133289	40133517	-	40133289	40133575	A5SS	0.2	50	50	ENSMUST00000217537.2	ENSMUSG00000019837.9	Gtf3c6	chr10	protein_coding	general transcription factor IIIC, polypeptide 6, alpha
chr10	40133289	40133562	-	40133289	40133575	A5SS	0.2	50	50	ENSMUST00000217537.2	ENSMUSG00000019837.9	Gtf3c6	chr10	protein_coding	general transcription factor IIIC, polypeptide 6, alpha
chr10	40133289	40133572	-	40133289	40133575	A5SS	0.2	50	50	ENSMUST00000217537.2	ENSMUSG00000019837.9	Gtf3c6	chr10	protein_coding	general transcription factor IIIC, polypeptide 6, alpha
chr10	40133289	40133913	-	40133289	40133572	5pMXE	0.2	50	50	ENSMUST00000019982.9	ENSMUSG00000019837.9	Gtf3c6	chr10	protein_coding	general transcription factor IIIC, polypeptide 6, alpha
chr10	40133289	40133517	-	40133289	40133572	A5SS	0.2	50	50	ENSMUST00000019982.9	ENSMUSG00000019837.9	Gtf3c6	chr10	protein_coding	general transcription factor IIIC, polypeptide 6, alpha
chr10	40133289	40133562	-	40133289	40133572	A5SS	0.2	50	50	ENSMUST00000019982.9	ENSMUSG00000019837.9	Gtf3c6	chr10	protein_coding	general transcription factor IIIC, polypeptide 6, alpha
chr10	40133289	40133913	-	40133289	40133562	5pMXE	0.2	50	50	ENSMUST00000213628.2	ENSMUSG00000019837.9	Gtf3c6	chr10	protein_coding	general transcription factor IIIC, polypeptide 6, alpha
chr10	40133289	40133517	-	40133289	40133562	A5SS	0.2	50	50	ENSMUST00000213628.2	ENSMUSG00000019837.9	Gtf3c6	chr10	protein_coding	general transcription factor IIIC, polypeptide 6, alpha
chr10	40133289	40133913	-	40133289	40133517	5pMXE	0.2	50	50	ENSMUST00000216847.2	ENSMUSG00000019837.9	Gtf3c6	chr10	protein_coding	general transcription factor IIIC, polypeptide 6, alpha
chr10	40170799	40177511	-	40170799	40177745	A5SS	0.5	50	50	ENSMUST00000099945.6	ENSMUSG00000075232.7	Amd1	chr10	protein_coding	S-adenosylmethionine decarboxylase 1
chr10	40312208;40330068	40330011;40342634	+	40312208	40342634	cassetteExon	0.5	100	100	ENSMUST00000216736.2	ENSMUSG00000038481.14	Cdk19	chr10	protein_coding	cyclin-dependent kinase 19
chr10	40312208;40330068	40330011;40345575	+	40312208;40342765	40342634;40345575	MXE	0.5	100	100	ENSMUST00000216736.2	ENSMUSG00000038481.14	Cdk19	chr10	protein_coding	cyclin-dependent kinase 19
chr10	40225717	40270321	+	40215598	40270321	A5SS	0.5	50	50	ENSMUST00000216736.2	ENSMUSG00000038481.14	Cdk19	chr10	protein_coding	cyclin-dependent kinase 19
chr10	40225717	40310300	+	40270396	40310300	A5SS&ES	0.5	50	50	ENSMUST00000216736.2	ENSMUSG00000038481.14	Cdk19	chr10	protein_coding	cyclin-dependent kinase 19
chr10	40225717	40310300	+	40225717;40270396	40270321;40310300	ES	0.5	50	50	ENSMUST00000044672.11	ENSMUSG00000038481.14	Cdk19	chr10	protein_coding	cyclin-dependent kinase 19
chr10	40330068	40345575	+	40330068;40342765	40342634;40345575	ES	0.5	50	50	ENSMUST00000044672.11	ENSMUSG00000038481.14	Cdk19	chr10	protein_coding	cyclin-dependent kinase 19
chr10	40446755	40449619	+	40446517	40449619	A5SS	0.5	50	50	ENSMUST00000078314.14	ENSMUSG00000019834.16	Slc22a16	chr10	protein_coding	solute carrier family 22 (organic cation transporter), member 16
chr10	40507776	40513341	+	40507776;40509042	40508934;40513341	ES	0.5	50	50	ENSMUST00000019977.8	ENSMUSG00000063428.9	Ddo	chr10	protein_coding	D-aspartate oxidase
chr10	40513517	40549682	+	40513517	40523470	3pMXE	0.25	50	50	ENSMUST00000019977.8	ENSMUSG00000063428.9	Ddo	chr10	protein_coding	D-aspartate oxidase
chr10	40513517	40550582	+	40513517	40523470	3pMXE	0.25	50	50	ENSMUST00000019977.8	ENSMUSG00000063428.9	Ddo	chr10	protein_coding	D-aspartate oxidase
chr10	40507776	40508907	+	40507776	40508934	A3SS	0.33	50	50	ENSMUST00000019977.8	ENSMUSG00000063428.9	Ddo	chr10	protein_coding	D-aspartate oxidase
chr10	40513517	40515664	+	40513517	40523470	A3SS	0.25	50	50	ENSMUST00000019977.8	ENSMUSG00000063428.9	Ddo	chr10	protein_coding	D-aspartate oxidase
chr10	40507776	40513341	+	40507776;40509042	40508907;40513341	ES	0.5	50	50	ENSMUST00000214102.2	ENSMUSG00000063428.9	Ddo	chr10	protein_coding	D-aspartate oxidase
chr10	40513517	40515664	+	40513517	40550582	A3SS	0.25	50	50	ENSMUST00000214102.2	ENSMUSG00000063428.9	Ddo	chr10	protein_coding	D-aspartate oxidase
chr10	40513517	40549682	+	40513517	40550582	A3SS	0.25	50	50	ENSMUST00000214102.2	ENSMUSG00000063428.9	Ddo	chr10	protein_coding	D-aspartate oxidase
chr10	40513517	40515664	+	40513517	40549682	A3SS	0.25	50	50	ENSMUST00000213503.2	ENSMUSG00000063428.9	Ddo	chr10	protein_coding	D-aspartate oxidase
chr10	40760066	40796244	+	40759605	40796244	A5SS	0.5	50	50	ENSMUST00000019975.14	ENSMUSG00000019831.15	Wasf1	chr10	protein_coding	WASP family, member 1
chr10	41332611	41340273	+	41332611;41338356	41338275;41340273	ES	0.5	50	50	ENSMUST00000080771.10	ENSMUSG00000019826.12	Zbtb24	chr10	protein_coding	zinc finger and BTB domain containing 24
chr10	41331768	41332528	+	41331752	41332528	A5SS	0.5	50	50	ENSMUST00000080771.10	ENSMUSG00000019826.12	Zbtb24	chr10	protein_coding	zinc finger and BTB domain containing 24
chr10	41361875	41362368	+	41361875;41362117	41362024;41362368	ES	0.5	50	50	ENSMUST00000019967.16	ENSMUSG00000019823.18	Mical1	chr10	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 1
chr10	41354310	41354970	+	41354310	41354424	A3SS&ES	0.5	50	50	ENSMUST00000019967.16	ENSMUSG00000019823.18	Mical1	chr10	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 1
chr10	41355063	41355322	+	41355063	41355391	A3SS	0.5	50	50	ENSMUST00000019967.16	ENSMUSG00000019823.18	Mical1	chr10	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 1
chr10	41353316	41354006	+	41352536	41354006	A5SS	0.5	50	50	ENSMUST00000019967.16	ENSMUSG00000019823.18	Mical1	chr10	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing 1
chr10	41364971	41365271	-	41365020	41365271	A3SS	0.33	50	50	ENSMUST00000019965.13	ENSMUSG00000019822.13	Smpd2	chr10	protein_coding	sphingomyelin phosphodiesterase 2, neutral
chr10	41365009	41365271	-	41365020	41365271	A3SS	0.33	50	50	ENSMUST00000019965.13	ENSMUSG00000019822.13	Smpd2	chr10	protein_coding	sphingomyelin phosphodiesterase 2, neutral
chr10	41364305	41364425	-	41364305	41364429	A5SS	0.5	50	50	ENSMUST00000019965.13	ENSMUSG00000019822.13	Smpd2	chr10	protein_coding	sphingomyelin phosphodiesterase 2, neutral
chr10	41365009	41365271	-	41364971	41365271	A3SS	0.33	50	50	ENSMUST00000155411.8	ENSMUSG00000019822.13	Smpd2	chr10	protein_coding	sphingomyelin phosphodiesterase 2, neutral
chr10	41377927	41383420	+	41377927;41379048	41378992;41383420	ES	0.5	50	50	ENSMUST00000105507.5	ENSMUSG00000078451.6	Ppil6	chr10	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 6
chr10	41395946	41397914	+	41395696	41397914	A5SS	0.33	50	50	ENSMUST00000019962.15	ENSMUSG00000019818.16	Cd164	chr10	protein_coding	CD164 antigen
chr10	41396380	41397914	+	41395696	41397914	A5SS	0.33	50	50	ENSMUST00000019962.15	ENSMUSG00000019818.16	Cd164	chr10	protein_coding	CD164 antigen
chr10	41396380	41397914	+	41395946	41397914	A5SS	0.33	50	50	ENSMUST00000189300.2	ENSMUSG00000019818.16	Cd164	chr10	protein_coding	CD164 antigen
chr10	41422999	41428314	-	41422999	41426718	A5SS&ES	0.5	50	50	ENSMUST00000159978.2	ENSMUSG00000075225.16	Ccdc162	chr10	protein_coding	coiled-coil domain containing 162
chr10	41426927	41428314	-	41426927	41428802	A5SS	0.5	50	50	ENSMUST00000159978.2	ENSMUSG00000075225.16	Ccdc162	chr10	protein_coding	coiled-coil domain containing 162
chr10	41422999	41428314	-	41422999;41426927	41426718;41428314	ES	0.5	50	50	ENSMUST00000219054.2	ENSMUSG00000075225.16	Ccdc162	chr10	protein_coding	coiled-coil domain containing 162
chr10	41428466	41429412	-	41428466;41429203	41429069;41429412	ES	0.5	50	50	ENSMUST00000219054.2	ENSMUSG00000075225.16	Ccdc162	chr10	protein_coding	coiled-coil domain containing 162
chr10	41432814	41436425	-	41432814	41437107	A5SS	0.5	50	50	ENSMUST00000219054.2	ENSMUSG00000075225.16	Ccdc162	chr10	protein_coding	coiled-coil domain containing 162
chr10	41463441	41463703	-	41463441	41465556	A5SS	0.5	50	50	ENSMUST00000219054.2	ENSMUSG00000075225.16	Ccdc162	chr10	protein_coding	coiled-coil domain containing 162
chr10	41486482	41488766	-	41482688	41488766	A3SS	0.5	50	50	ENSMUST00000189488.3	ENSMUSG00000075225.16	Ccdc162	chr10	protein_coding	coiled-coil domain containing 162
chr10	41524914	41530938	-	41523145	41530938	A3SS	0.5	50	50	ENSMUST00000189488.3	ENSMUSG00000075225.16	Ccdc162	chr10	protein_coding	coiled-coil domain containing 162
chr10	41422999	41428314	-	41426927	41428314	3pMXE	0.5	50	50	ENSMUST00000160002.8	ENSMUSG00000075225.16	Ccdc162	chr10	protein_coding	coiled-coil domain containing 162
chr10	41426927;41429203	41428802;41429412	-	41426927;41428466	41428314;41429412	MXE	0.5	100	100	ENSMUST00000160002.8	ENSMUSG00000075225.16	Ccdc162	chr10	protein_coding	coiled-coil domain containing 162
chr10	41428466	41429412	-	41428466	41429069	A5SS	0.5	50	50	ENSMUST00000159868.2	ENSMUSG00000075225.16	Ccdc162	chr10	protein_coding	coiled-coil domain containing 162
chr10	41599934;41604710	41604624;41605327	-	41599934	41605327	cassetteExon	0.5	100	100	ENSMUST00000105505.10	ENSMUSG00000019813.17	Cep57l1	chr10	protein_coding	centrosomal protein 57-like 1
chr10	41616909	41621767	-	41619217	41621767	A3SS&ES	0.5	50	50	ENSMUST00000105505.10	ENSMUSG00000019813.17	Cep57l1	chr10	protein_coding	centrosomal protein 57-like 1
chr10	41621917	41685569	-	41621917;41657546	41657480;41685569	ES	0.33	50	50	ENSMUST00000186239.7	ENSMUSG00000019813.17	Cep57l1	chr10	protein_coding	centrosomal protein 57-like 1
chr10	41657546	41685842	-	41657546	41685569	5pMXE	0.5	50	50	ENSMUST00000186239.7	ENSMUSG00000019813.17	Cep57l1	chr10	protein_coding	centrosomal protein 57-like 1
chr10	41678959	41685569	-	41657546	41685569	A3SS	0.33	50	50	ENSMUST00000186239.7	ENSMUSG00000019813.17	Cep57l1	chr10	protein_coding	centrosomal protein 57-like 1
chr10	41621917	41622563	-	41621917	41657480	A5SS	0.33	50	50	ENSMUST00000186239.7	ENSMUSG00000019813.17	Cep57l1	chr10	protein_coding	centrosomal protein 57-like 1
chr10	41678959	41685569	-	41621917	41685569	A3SS	0.33	50	50	ENSMUST00000189770.7	ENSMUSG00000019813.17	Cep57l1	chr10	protein_coding	centrosomal protein 57-like 1
chr10	41621917	41622563	-	41621917	41685569	A5SS	0.33	50	50	ENSMUST00000189770.7	ENSMUSG00000019813.17	Cep57l1	chr10	protein_coding	centrosomal protein 57-like 1
chr10	41621917	41685569	-	41621917	41657480	A5SS&ES	0.33	50	50	ENSMUST00000187143.7	ENSMUSG00000019813.17	Cep57l1	chr10	protein_coding	centrosomal protein 57-like 1
chr10	41599934	41605327	-	41595903	41605327	A3SS	0.33	50	50	ENSMUST00000191498.2	ENSMUSG00000019813.17	Cep57l1	chr10	protein_coding	centrosomal protein 57-like 1
chr10	41604710	41605327	-	41595903	41605327	A3SS	0.33	50	50	ENSMUST00000191498.2	ENSMUSG00000019813.17	Cep57l1	chr10	protein_coding	centrosomal protein 57-like 1
chr10	41595903	41597553	-	41595903	41605327	A5SS	0.5	50	50	ENSMUST00000191498.2	ENSMUSG00000019813.17	Cep57l1	chr10	protein_coding	centrosomal protein 57-like 1
chr10	41599934	41605327	-	41604710	41605327	3pMXE	0.33	50	50	ENSMUST00000187935.7	ENSMUSG00000019813.17	Cep57l1	chr10	protein_coding	centrosomal protein 57-like 1
chr10	41622935	41629687	+	41622935	41650736	A3SS	0.5	50	50	ENSMUST00000215667.2	ENSMUSG00000102114.3	BC048559	chr10	lncRNA	cDNA sequence BC048559
chr10	41774421	41778509	+	41774421	41778525	A3SS	0.5	50	50	ENSMUST00000099931.11	ENSMUSG00000038332.14	Sesn1	chr10	protein_coding	sestrin 1
chr10	41763591	41770038	+	41687296	41770038	A5SS	0.5	50	50	ENSMUST00000099931.11	ENSMUSG00000038332.14	Sesn1	chr10	protein_coding	sestrin 1
chr10	41876494	41887764	-	41876494;41884721	41884649;41887764	ES	0.5	50	50	ENSMUST00000160262.9	ENSMUSG00000071324.12	Armc2	chr10	protein_coding	armadillo repeat containing 2
chr10	41847196;41851064	41851033;41851355	-	41847196	41851355	cassetteExon	0.5	100	100	ENSMUST00000160262.9	ENSMUSG00000071324.12	Armc2	chr10	protein_coding	armadillo repeat containing 2
chr10	41863031	41869035	-	41856593	41869035	A3SS	0.5	50	50	ENSMUST00000160262.9	ENSMUSG00000071324.12	Armc2	chr10	protein_coding	armadillo repeat containing 2
chr10	41888019	41894189	-	41888019	41894298	A5SS	0.5	50	50	ENSMUST00000160262.9	ENSMUSG00000071324.12	Armc2	chr10	protein_coding	armadillo repeat containing 2
chr10	42123782	42150812	-	42073897	42150812	A3SS	0.5	50	50	ENSMUST00000105502.8	ENSMUSG00000048756.12	Foxo3	chr10	protein_coding	forkhead box O3
chr10	42151537	42152522	-	42151541	42152522	A3SS	0.5	50	50	ENSMUST00000105502.8	ENSMUSG00000048756.12	Foxo3	chr10	protein_coding	forkhead box O3
chr10	42073897	42133602	-	42073897	42150812	A5SS	0.5	50	50	ENSMUST00000105502.8	ENSMUSG00000048756.12	Foxo3	chr10	protein_coding	forkhead box O3
chr10	42236243	42291545	-	42236243;42276395	42276337;42291545	ES	0.5	50	50	ENSMUST00000151747.8	ENSMUSG00000038302.15	Afg1l	chr10	protein_coding	AFG1 like ATPase
chr10	42236243;42271013	42270822;42276337	-	42236243	42276337	cassetteExon	0.5	100	100	ENSMUST00000151747.8	ENSMUSG00000038302.15	Afg1l	chr10	protein_coding	AFG1 like ATPase
chr10	42330526	42354259	-	42302583	42354259	A3SS	0.5	50	50	ENSMUST00000151747.8	ENSMUSG00000038302.15	Afg1l	chr10	protein_coding	AFG1 like ATPase
chr10	42302583	42314350	-	42302583	42354259	A5SS	0.5	50	50	ENSMUST00000151747.8	ENSMUSG00000038302.15	Afg1l	chr10	protein_coding	AFG1 like ATPase
chr10	42236243	42270822	-	42236243	42291545	A5SS	0.33	50	50	ENSMUST00000149832.2	ENSMUSG00000038302.15	Afg1l	chr10	protein_coding	AFG1 like ATPase
chr10	42378488	42401950	+	42378422	42401950	A5SS	0.5	50	50	ENSMUST00000105500.8	ENSMUSG00000019804.13	Snx3	chr10	protein_coding	sorting nexin 3
chr10	42378488	42409145	+	42402045	42409145	A5SS&ES	0.5	50	50	ENSMUST00000105500.8	ENSMUSG00000019804.13	Snx3	chr10	protein_coding	sorting nexin 3
chr10	42378488	42409145	+	42378488;42402045	42401950;42409145	ES	0.5	50	50	ENSMUST00000019939.12	ENSMUSG00000019804.13	Snx3	chr10	protein_coding	sorting nexin 3
chr10	42444465	42444653	-	42444465	42447369	A5SS	0.5	50	50	ENSMUST00000019938.11	ENSMUSG00000019803.12	Nr2e1	chr10	protein_coding	nuclear receptor subfamily 2, group E, member 1
chr10	42454307	42456194	-	42454307	42458878	A5SS	0.33	50	50	ENSMUST00000019938.11	ENSMUSG00000019803.12	Nr2e1	chr10	protein_coding	nuclear receptor subfamily 2, group E, member 1
chr10	42454307	42456665	-	42454307	42458878	A5SS	0.33	50	50	ENSMUST00000019938.11	ENSMUSG00000019803.12	Nr2e1	chr10	protein_coding	nuclear receptor subfamily 2, group E, member 1
chr10	42454307	42456665	-	42454307	42456194	5pMXE	0.33	50	50	ENSMUST00000126848.2	ENSMUSG00000019803.12	Nr2e1	chr10	protein_coding	nuclear receptor subfamily 2, group E, member 1
chr10	42555393	42559156	+	42460116	42559156	A5SS	0.5	50	50	ENSMUST00000105497.8	ENSMUSG00000038280.13	Ostm1	chr10	protein_coding	osteopetrosis associated transmembrane protein 1
chr10	42688491	42688664	+	42688491	42688661	A3SS	0.5	50	50	ENSMUST00000019937.5	ENSMUSG00000019802.14	Sec63	chr10	protein_coding	SEC63-like (S. cerevisiae)
chr10	42694028	42699877	+	42692465	42699877	A5SS	0.33	50	50	ENSMUST00000019937.5	ENSMUSG00000019802.14	Sec63	chr10	protein_coding	SEC63-like (S. cerevisiae)
chr10	42694078	42699877	+	42692465	42699877	A5SS	0.33	50	50	ENSMUST00000019937.5	ENSMUSG00000019802.14	Sec63	chr10	protein_coding	SEC63-like (S. cerevisiae)
chr10	42694078	42699877	+	42694028	42699877	A5SS	0.33	50	50	ENSMUST00000124613.8	ENSMUSG00000019802.14	Sec63	chr10	protein_coding	SEC63-like (S. cerevisiae)
chr10	42806600	42810137	+	42806600	42810949	A3SS	0.5	50	50	ENSMUST00000063063.14	ENSMUSG00000044770.15	Scml4	chr10	protein_coding	Scm polycomb group protein like 4
chr10	42736622	42800050	+	42788227	42800050	A5SS&ES	0.25	50	50	ENSMUST00000063063.14	ENSMUSG00000044770.15	Scml4	chr10	protein_coding	Scm polycomb group protein like 4
chr10	42741712	42800050	+	42788227	42800050	A5SS&ES	0.25	50	50	ENSMUST00000063063.14	ENSMUSG00000044770.15	Scml4	chr10	protein_coding	Scm polycomb group protein like 4
chr10	42778543	42783713	+	42736849	42783713	A5SS	0.5	50	50	ENSMUST00000063063.14	ENSMUSG00000044770.15	Scml4	chr10	protein_coding	Scm polycomb group protein like 4
chr10	42816568	42822865	+	42811143	42822865	A5SS	0.5	50	50	ENSMUST00000063063.14	ENSMUSG00000044770.15	Scml4	chr10	protein_coding	Scm polycomb group protein like 4
chr10	42736849	42800050	+	42736622	42800050	A5SS	0.25	50	50	ENSMUST00000157071.8	ENSMUSG00000044770.15	Scml4	chr10	protein_coding	Scm polycomb group protein like 4
chr10	42741712	42800050	+	42736622	42800050	A5SS	0.25	50	50	ENSMUST00000157071.8	ENSMUSG00000044770.15	Scml4	chr10	protein_coding	Scm polycomb group protein like 4
chr10	42736849	42783713	+	42736849	42800050	A3SS	0.5	50	50	ENSMUST00000105494.8	ENSMUSG00000044770.15	Scml4	chr10	protein_coding	Scm polycomb group protein like 4
chr10	42741712	42800050	+	42736849	42800050	A5SS	0.25	50	50	ENSMUST00000105494.8	ENSMUSG00000044770.15	Scml4	chr10	protein_coding	Scm polycomb group protein like 4
chr10	42788227	42800050	+	42736849	42800050	A5SS	0.25	50	50	ENSMUST00000105494.8	ENSMUSG00000044770.15	Scml4	chr10	protein_coding	Scm polycomb group protein like 4
chr10	42738652	42739987	-	42738592	42739987	A3SS	0.33	50	50	ENSMUST00000217505.2	ENSMUSG00000111293.2	Gm34006	chr10	lncRNA	predicted gene, 34006
chr10	42739317	42739987	-	42738592	42739987	A3SS	0.33	50	50	ENSMUST00000217505.2	ENSMUSG00000111293.2	Gm34006	chr10	lncRNA	predicted gene, 34006
chr10	42739317	42739987	-	42738652	42739987	A3SS	0.33	50	50	ENSMUST00000216467.2	ENSMUSG00000111293.2	Gm34006	chr10	lncRNA	predicted gene, 34006
chr10	43049518	43049972	-	43036840	43049972	A3SS	0.5	50	50	ENSMUST00000040275.9	ENSMUSG00000038248.9	Sobp	chr10	protein_coding	sine oculis binding protein
chr10	43098009	43174795	+	43098056	43174795	A5SS	0.5	50	50	ENSMUST00000160823.8	ENSMUSG00000038240.14	Pdss2	chr10	protein_coding	prenyl (solanesyl) diphosphate synthase, subunit 2
chr10	43271688	43315795	+	43271688;43289543	43289511;43315795	ES	0.5	50	50	ENSMUST00000095725.11	ENSMUSG00000038240.14	Pdss2	chr10	protein_coding	prenyl (solanesyl) diphosphate synthase, subunit 2
chr10	43289543	43340621	+	43289543	43315795	3pMXE	0.5	50	50	ENSMUST00000095725.11	ENSMUSG00000038240.14	Pdss2	chr10	protein_coding	prenyl (solanesyl) diphosphate synthase, subunit 2
chr10	43271688	43278509	+	43271688	43289511	A3SS	0.33	50	50	ENSMUST00000095725.11	ENSMUSG00000038240.14	Pdss2	chr10	protein_coding	prenyl (solanesyl) diphosphate synthase, subunit 2
chr10	43271688	43315795	+	43271688	43289511	A3SS&ES	0.33	50	50	ENSMUST00000159139.8	ENSMUSG00000038240.14	Pdss2	chr10	protein_coding	prenyl (solanesyl) diphosphate synthase, subunit 2
chr10	43271688	43278509	+	43271688	43315795	A3SS	0.33	50	50	ENSMUST00000162008.2	ENSMUSG00000038240.14	Pdss2	chr10	protein_coding	prenyl (solanesyl) diphosphate synthase, subunit 2
chr10	43361409	43369638	+	43355368	43369638	A5SS	0.33	50	50	ENSMUST00000167488.9	ENSMUSG00000038214.16	Bend3	chr10	protein_coding	BEN domain containing 3
chr10	43369462	43369638	+	43355368	43369638	A5SS	0.33	50	50	ENSMUST00000167488.9	ENSMUSG00000038214.16	Bend3	chr10	protein_coding	BEN domain containing 3
chr10	43369462	43369638	+	43361409	43369638	A5SS	0.33	50	50	ENSMUST00000216679.2	ENSMUSG00000038214.16	Bend3	chr10	protein_coding	BEN domain containing 3
chr10	43409451	43416936	-	43409153	43416936	A3SS	0.5	50	50	ENSMUST00000147196.3	ENSMUSG00000019797.12	Mtres1	chr10	protein_coding	mitochondrial transcription rescue factor 1
chr10	43401404	43401698	-	43401404	43406594	A5SS	0.5	50	50	ENSMUST00000147196.3	ENSMUSG00000019797.12	Mtres1	chr10	protein_coding	mitochondrial transcription rescue factor 1
chr10	43456149	43458600	+	43455318	43458600	A5SS	0.5	50	50	ENSMUST00000058714.10	ENSMUSG00000047139.10	Cd24a	chr10	protein_coding	CD24a antigen
chr10	43469559	43480343	+	43469559;43469930	43469771;43480343	ES	0.5	50	50	ENSMUST00000215599.2	ENSMUSG00000075184.4	F930017D23Rik	chr10	lncRNA	RIKEN cDNA F930017D23 gene
chr10	43581817	43584151	+	43581817	43582719	3pMXE	0.5	50	50	ENSMUST00000215599.2	ENSMUSG00000075184.4	F930017D23Rik	chr10	lncRNA	RIKEN cDNA F930017D23 gene
chr10	43480514	43481158	+	43480514	43581690	A3SS	0.33	50	50	ENSMUST00000215599.2	ENSMUSG00000075184.4	F930017D23Rik	chr10	lncRNA	RIKEN cDNA F930017D23 gene
chr10	43480514	43505387	+	43480514	43581690	A3SS	0.33	50	50	ENSMUST00000215599.2	ENSMUSG00000075184.4	F930017D23Rik	chr10	lncRNA	RIKEN cDNA F930017D23 gene
chr10	43480514	43505387	+	43480514	43481158	3pMXE	0.33	50	50	ENSMUST00000216878.2	ENSMUSG00000075184.4	F930017D23Rik	chr10	lncRNA	RIKEN cDNA F930017D23 gene
chr10	43500055	43505387	+	43480514	43505387	A5SS	0.5	50	50	ENSMUST00000099888.4	ENSMUSG00000075184.4	F930017D23Rik	chr10	lncRNA	RIKEN cDNA F930017D23 gene
chr10	43622651	43639493	+	43622651	43633277	3pMXE	0.33	50	50	ENSMUST00000213330.2	ENSMUSG00000111422.2	1700027J07Rik	chr10	lncRNA	RIKEN cDNA 1700027J07 gene
chr10	43622651	43623650	+	43622651	43633277	A3SS	0.33	50	50	ENSMUST00000213330.2	ENSMUSG00000111422.2	1700027J07Rik	chr10	lncRNA	RIKEN cDNA 1700027J07 gene
chr10	43622651	43623650	+	43622651	43639493	A3SS	0.33	50	50	ENSMUST00000215747.2	ENSMUSG00000111422.2	1700027J07Rik	chr10	lncRNA	RIKEN cDNA 1700027J07 gene
chr10	43703004	43708667	+	43700369	43708667	A5SS	0.33	50	50	ENSMUST00000216740.2	ENSMUSG00000111342.2	4933404K13Rik	chr10	lncRNA	RIKEN cDNA 4933404K13 gene
chr10	43706906	43708667	+	43700369	43708667	A5SS	0.33	50	50	ENSMUST00000216740.2	ENSMUSG00000111342.2	4933404K13Rik	chr10	lncRNA	RIKEN cDNA 4933404K13 gene
chr10	43703004	43708667	+	43706906	43708667	A5SS&ES	0.5	50	50	ENSMUST00000214651.2	ENSMUSG00000111342.2	4933404K13Rik	chr10	lncRNA	RIKEN cDNA 4933404K13 gene
chr10	43772164;43772593	43772460;43777610	-	43772164	43777610	cassetteExon	0.5	100	100	ENSMUST00000020012.7	ENSMUSG00000019863.8	Qrsl1	chr10	protein_coding	glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1
chr10	43797184	43797383	+	43786913	43797383	A5SS	0.5	50	50	ENSMUST00000054418.12	ENSMUSG00000019864.15	Rtn4ip1	chr10	protein_coding	reticulon 4 interacting protein 1
chr10	43880886	43934501	-	43880886	43941721	A5SS	0.5	50	50	ENSMUST00000200401.2	ENSMUSG00000019866.16	Crybg1	chr10	protein_coding	crystallin beta-gamma domain containing 1
chr10	44093112	44093339	+	44090155	44093339	A5SS	0.5	50	50	ENSMUST00000169525.3	ENSMUSG00000091358.3	Speer5-ps1	chr10	transcribed_processed_pseudogene	spermatogenesis associated glutamate (E)-rich protein 5, pseudogene 1
chr10	44162193	44170592	+	44162193;44165986	44165859;44170592	ES	0.5	50	50	ENSMUST00000039286.5	ENSMUSG00000038160.8	Atg5	chr10	protein_coding	autophagy related 5
chr10	44332866	44334463	-	44332866;44333055	44332977;44334463	ES	0.5	50	50	ENSMUST00000039174.11	ENSMUSG00000038151.14	Prdm1	chr10	protein_coding	PR domain containing 1, with ZNF domain
chr10	44332866	44333120	-	44332866	44332977	A5SS&ES	0.33	50	50	ENSMUST00000039174.11	ENSMUSG00000038151.14	Prdm1	chr10	protein_coding	PR domain containing 1, with ZNF domain
chr10	44332866	44404362	-	44332866	44334463	5pMXE	0.25	50	50	ENSMUST00000105490.3	ENSMUSG00000038151.14	Prdm1	chr10	protein_coding	PR domain containing 1, with ZNF domain
chr10	44332866	44333120	-	44332866	44334463	A5SS	0.25	50	50	ENSMUST00000105490.3	ENSMUSG00000038151.14	Prdm1	chr10	protein_coding	PR domain containing 1, with ZNF domain
chr10	44332866	44404362	-	44332866	44333120	5pMXE	0.25	50	50	ENSMUST00000218369.2	ENSMUSG00000038151.14	Prdm1	chr10	protein_coding	PR domain containing 1, with ZNF domain
chr10	44332866	44332977	-	44332866	44404362	A5SS	0.25	50	50	ENSMUST00000167340.2	ENSMUSG00000038151.14	Prdm1	chr10	protein_coding	PR domain containing 1, with ZNF domain
chr10	44476021;44555205	44555107;44564407	+	44476021	44564407	cassetteExon	0.5	100	100	ENSMUST00000217008.2	ENSMUSG00000111535.2	Gm35154	chr10	lncRNA	predicted gene, 35154
chr10	45165671	45190657	+	45101667	45190657	A5SS	0.5	50	50	ENSMUST00000175658.2	ENSMUSG00000019848.15	Popdc3	chr10	protein_coding	popeye domain containing 3
chr10	45191375	45192579	+	45191375	45192527	A3SS	0.5	50	50	ENSMUST00000019994.14	ENSMUSG00000019848.15	Popdc3	chr10	protein_coding	popeye domain containing 3
chr10	45345314	45352444	-	45345314	45346147	5pMXE	0.33	50	50	ENSMUST00000079390.7	ENSMUSG00000063804.9	Lin28b	chr10	protein_coding	lin-28 homolog B (C. elegans)
chr10	45345314	45362323	-	45345314	45346147	5pMXE	0.33	50	50	ENSMUST00000079390.7	ENSMUSG00000063804.9	Lin28b	chr10	protein_coding	lin-28 homolog B (C. elegans)
chr10	45334999	45345133	-	45296804	45345133	A3SS	0.5	50	50	ENSMUST00000079390.7	ENSMUSG00000063804.9	Lin28b	chr10	protein_coding	lin-28 homolog B (C. elegans)
chr10	45345314	45352444	-	45345314	45362323	A5SS	0.33	50	50	ENSMUST00000215708.2	ENSMUSG00000063804.9	Lin28b	chr10	protein_coding	lin-28 homolog B (C. elegans)
chr10	45553359	45576673	+	45553359;45562829	45562698;45576673	ES	0.5	50	50	ENSMUST00000037044.13	ENSMUSG00000038822.16	Hace1	chr10	protein_coding	HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
chr10	45576771	45577107	+	45576771	45577050	A3SS	0.5	50	50	ENSMUST00000037044.13	ENSMUSG00000038822.16	Hace1	chr10	protein_coding	HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
chr10	45454510	45464476	+	45454246	45464476	A5SS	0.5	50	50	ENSMUST00000037044.13	ENSMUSG00000038822.16	Hace1	chr10	protein_coding	HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
chr10	45464556	45465577	+	45464530	45465577	A5SS	0.5	50	50	ENSMUST00000037044.13	ENSMUSG00000038822.16	Hace1	chr10	protein_coding	HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
chr10	45714504	45726723	+	45705124	45726723	A5SS	0.5	50	50	ENSMUST00000213245.2	ENSMUSG00000110874.2	D030045P18Rik	chr10	lncRNA	RIKEN cDNA D030045P18 gene
chr10	46111061	46113624	+	46111061	46111700	3pMXE	0.5	50	50	ENSMUST00000214686.2	ENSMUSG00000111182.2	Gm35430	chr10	lncRNA	predicted gene, 35430
chr10	46108323;46110519	46110469;46110980	+	46108323	46110980	cassetteExon	0.5	100	100	ENSMUST00000214686.2	ENSMUSG00000111182.2	Gm35430	chr10	lncRNA	predicted gene, 35430
chr10	46108323	46110469	+	46108323	46179740	A3SS	0.33	50	50	ENSMUST00000214146.2	ENSMUSG00000111182.2	Gm35430	chr10	lncRNA	predicted gene, 35430
chr10	46108323	46110980	+	46108323	46179740	A3SS	0.33	50	50	ENSMUST00000214146.2	ENSMUSG00000111182.2	Gm35430	chr10	lncRNA	predicted gene, 35430
chr10	46177148	46179740	+	46108323	46179740	A5SS	0.5	50	50	ENSMUST00000214146.2	ENSMUSG00000111182.2	Gm35430	chr10	lncRNA	predicted gene, 35430
chr10	49298768	49404083	-	49298768;49399951	49399778;49404083	ES	0.5	50	50	ENSMUST00000218823.2	ENSMUSG00000056073.17	Grik2	chr10	protein_coding	glutamate receptor, ionotropic, kainate 2 (beta 2)
chr10	48977368;48979744	48979606;48989466	-	48977368	48989466	cassetteExon	0.5	100	100	ENSMUST00000218823.2	ENSMUSG00000056073.17	Grik2	chr10	protein_coding	glutamate receptor, ionotropic, kainate 2 (beta 2)
chr10	48977368;48981161	48981075;48989466	-	48977368	48989466	cassetteExon	0.5	100	100	ENSMUST00000218823.2	ENSMUSG00000056073.17	Grik2	chr10	protein_coding	glutamate receptor, ionotropic, kainate 2 (beta 2)
chr10	49069988	49116675	-	49009000	49116675	A3SS	0.5	50	50	ENSMUST00000218823.2	ENSMUSG00000056073.17	Grik2	chr10	protein_coding	glutamate receptor, ionotropic, kainate 2 (beta 2)
chr10	49372256	49399778	-	49298768	49399778	A3SS	0.5	50	50	ENSMUST00000218823.2	ENSMUSG00000056073.17	Grik2	chr10	protein_coding	glutamate receptor, ionotropic, kainate 2 (beta 2)
chr10	49120539	49148945	-	49120539	49148836	A5SS	0.5	50	50	ENSMUST00000218823.2	ENSMUSG00000056073.17	Grik2	chr10	protein_coding	glutamate receptor, ionotropic, kainate 2 (beta 2)
chr10	49298768	49309397	-	49298768	49399778	A5SS	0.33	50	50	ENSMUST00000218823.2	ENSMUSG00000056073.17	Grik2	chr10	protein_coding	glutamate receptor, ionotropic, kainate 2 (beta 2)
chr10	48979744;48981161	48981075;48989466	-	48979744	48989466	cassetteExon	0.5	100	100	ENSMUST00000218598.2	ENSMUSG00000056073.17	Grik2	chr10	protein_coding	glutamate receptor, ionotropic, kainate 2 (beta 2)
chr10	48977368	48979606	-	48977366	48979606	A3SS	0.5	50	50	ENSMUST00000218598.2	ENSMUSG00000056073.17	Grik2	chr10	protein_coding	glutamate receptor, ionotropic, kainate 2 (beta 2)
chr10	48977368	48989466	-	48979744	48989466	A3SS&ES	0.33	50	50	ENSMUST00000218598.2	ENSMUSG00000056073.17	Grik2	chr10	protein_coding	glutamate receptor, ionotropic, kainate 2 (beta 2)
chr10	48977368	48981075	-	48977368;48979744	48979606;48981075	ES	0.5	50	50	ENSMUST00000219509.2	ENSMUSG00000056073.17	Grik2	chr10	protein_coding	glutamate receptor, ionotropic, kainate 2 (beta 2)
chr10	48977368;48979744	48979606;48989466	-	48977368;48981161	48981075;48989466	MXE	0.5	100	100	ENSMUST00000218441.2	ENSMUSG00000056073.17	Grik2	chr10	protein_coding	glutamate receptor, ionotropic, kainate 2 (beta 2)
chr10	48977368	48981075	-	48977368	48979606	5pMXE	0.33	50	50	ENSMUST00000220330.2	ENSMUSG00000056073.17	Grik2	chr10	protein_coding	glutamate receptor, ionotropic, kainate 2 (beta 2)
chr10	48977368	48989466	-	48977368	48979606	5pMXE	0.33	50	50	ENSMUST00000220330.2	ENSMUSG00000056073.17	Grik2	chr10	protein_coding	glutamate receptor, ionotropic, kainate 2 (beta 2)
chr10	48977368	48989466	-	48981161	48989466	3pMXE	0.33	50	50	ENSMUST00000079751.9	ENSMUSG00000056073.17	Grik2	chr10	protein_coding	glutamate receptor, ionotropic, kainate 2 (beta 2)
chr10	48979744	48989466	-	48981161	48989466	3pMXE	0.33	50	50	ENSMUST00000079751.9	ENSMUSG00000056073.17	Grik2	chr10	protein_coding	glutamate receptor, ionotropic, kainate 2 (beta 2)
chr10	49298768	49404083	-	49298768	49309397	5pMXE	0.33	50	50	ENSMUST00000219051.2	ENSMUSG00000056073.17	Grik2	chr10	protein_coding	glutamate receptor, ionotropic, kainate 2 (beta 2)
chr10	50480978	50493808	+	50480978;50484166	50484016;50493808	ES	0.5	50	50	ENSMUST00000035606.10	ENSMUSG00000038774.10	Ascc3	chr10	protein_coding	activating signal cointegrator 1 complex subunit 3
chr10	50473117	50480847	+	50468993	50480847	A5SS	0.5	50	50	ENSMUST00000035606.10	ENSMUSG00000038774.10	Ascc3	chr10	protein_coding	activating signal cointegrator 1 complex subunit 3
chr10	50639948	50643187	+	50630218	50643187	A5SS	0.5	50	50	ENSMUST00000035606.10	ENSMUSG00000038774.10	Ascc3	chr10	protein_coding	activating signal cointegrator 1 complex subunit 3
chr10	50480978	50493808	+	50480978	50484016	3pMXE	0.5	50	50	ENSMUST00000220178.2	ENSMUSG00000038774.10	Ascc3	chr10	protein_coding	activating signal cointegrator 1 complex subunit 3
chr10	51367328	51367957	+	51367328;51367814	51367530;51367957	ES	0.5	50	50	ENSMUST00000218123.2	ENSMUSG00000062593.18	Gm49339	chr10	protein_coding	predicted gene, 49339
chr10	51369301	51370889	+	51369301;51370274	51370158;51370889	ES	0.5	50	50	ENSMUST00000218123.2	ENSMUSG00000062593.18	Gm49339	chr10	protein_coding	predicted gene, 49339
chr10	51356849	51357002	+	51356849	51367293	A3SS	0.5	50	50	ENSMUST00000218123.2	ENSMUSG00000062593.18	Gm49339	chr10	protein_coding	predicted gene, 49339
chr10	51367328	51368057	+	51367328	51367530	A3SS&ES	0.33	50	50	ENSMUST00000218123.2	ENSMUSG00000062593.18	Gm49339	chr10	protein_coding	predicted gene, 49339
chr10	51369301	51370175	+	51369301	51370158	A3SS	0.33	50	50	ENSMUST00000218123.2	ENSMUSG00000062593.18	Gm49339	chr10	protein_coding	predicted gene, 49339
chr10	51370274	51370818	+	51370274	51370889	A3SS	0.5	50	50	ENSMUST00000218123.2	ENSMUSG00000062593.18	Gm49339	chr10	protein_coding	predicted gene, 49339
chr10	51370989	51372090	+	51370989	51371633	A3SS	0.5	50	50	ENSMUST00000218123.2	ENSMUSG00000062593.18	Gm49339	chr10	protein_coding	predicted gene, 49339
chr10	51367147	51367293	+	51356849	51367293	A5SS	0.33	50	50	ENSMUST00000218123.2	ENSMUSG00000062593.18	Gm49339	chr10	protein_coding	predicted gene, 49339
chr10	51367152	51367293	+	51356849	51367293	A5SS	0.33	50	50	ENSMUST00000218123.2	ENSMUSG00000062593.18	Gm49339	chr10	protein_coding	predicted gene, 49339
chr10	51370989	51372090	+	51370941	51372090	A5SS	0.5	50	50	ENSMUST00000219696.2	ENSMUSG00000062593.18	Gm49339	chr10	protein_coding	predicted gene, 49339
chr10	51369301;51370274	51370175;51370889	+	51369301	51370889	cassetteExon	0.5	100	100	ENSMUST00000217706.2	ENSMUSG00000062593.18	Gm49339	chr10	protein_coding	predicted gene, 49339
chr10	51357037	51357663	+	51357037;51357520	51357236;51357663	ES	0.5	50	50	ENSMUST00000102894.6	ENSMUSG00000112023.2	Lilr4b	chr10	protein_coding	leukocyte immunoglobulin-like receptor, subfamily B, member 4B
chr10	51359974;51360383	51360195;51360613	+	51359974	51360613	cassetteExon	0.5	100	100	ENSMUST00000102894.6	ENSMUSG00000112023.2	Lilr4b	chr10	protein_coding	leukocyte immunoglobulin-like receptor, subfamily B, member 4B
chr10	51359974;51360383	51360346;51360613	+	51359974	51360613	cassetteExon	0.5	100	100	ENSMUST00000102894.6	ENSMUSG00000112023.2	Lilr4b	chr10	protein_coding	leukocyte immunoglobulin-like receptor, subfamily B, member 4B
chr10	51357037	51357763	+	51357037	51357236	A3SS&ES	0.33	50	50	ENSMUST00000102894.6	ENSMUSG00000112023.2	Lilr4b	chr10	protein_coding	leukocyte immunoglobulin-like receptor, subfamily B, member 4B
chr10	51359974	51360542	+	51359974	51360613	A3SS	0.25	50	50	ENSMUST00000102894.6	ENSMUSG00000112023.2	Lilr4b	chr10	protein_coding	leukocyte immunoglobulin-like receptor, subfamily B, member 4B
chr10	51360665	51361312	+	51360665	51361809	A3SS	0.5	50	50	ENSMUST00000102894.6	ENSMUSG00000112023.2	Lilr4b	chr10	protein_coding	leukocyte immunoglobulin-like receptor, subfamily B, member 4B
chr10	51356854	51357002	+	51356849	51357002	A5SS	0.5	50	50	ENSMUST00000102894.6	ENSMUSG00000112023.2	Lilr4b	chr10	protein_coding	leukocyte immunoglobulin-like receptor, subfamily B, member 4B
chr10	51359023	51359858	+	51359000	51359858	A5SS	0.5	50	50	ENSMUST00000102894.6	ENSMUSG00000112023.2	Lilr4b	chr10	protein_coding	leukocyte immunoglobulin-like receptor, subfamily B, member 4B
chr10	51360713	51361809	+	51360665	51361809	A5SS	0.5	50	50	ENSMUST00000102894.6	ENSMUSG00000112023.2	Lilr4b	chr10	protein_coding	leukocyte immunoglobulin-like receptor, subfamily B, member 4B
chr10	51361852	51361984	+	51361876	51361984	A5SS	0.5	50	50	ENSMUST00000102894.6	ENSMUSG00000112023.2	Lilr4b	chr10	protein_coding	leukocyte immunoglobulin-like receptor, subfamily B, member 4B
chr10	51357037	51357763	+	51357037	51357663	A3SS	0.33	50	50	ENSMUST00000219661.2	ENSMUSG00000112023.2	Lilr4b	chr10	protein_coding	leukocyte immunoglobulin-like receptor, subfamily B, member 4B
chr10	51357037	51357663	+	51357037	51357236	A3SS	0.33	50	50	ENSMUST00000219178.2	ENSMUSG00000112023.2	Lilr4b	chr10	protein_coding	leukocyte immunoglobulin-like receptor, subfamily B, member 4B
chr10	51359974	51360346	+	51359974	51360195	A3SS	0.25	50	50	ENSMUST00000219178.2	ENSMUSG00000112023.2	Lilr4b	chr10	protein_coding	leukocyte immunoglobulin-like receptor, subfamily B, member 4B
chr10	51359974	51360542	+	51359974	51360195	A3SS&ES	0.25	50	50	ENSMUST00000219178.2	ENSMUSG00000112023.2	Lilr4b	chr10	protein_coding	leukocyte immunoglobulin-like receptor, subfamily B, member 4B
chr10	51359974;51360435	51360195;51360542	+	51359974	51360542	cassetteExon	0.5	100	100	ENSMUST00000218649.2	ENSMUSG00000112023.2	Lilr4b	chr10	protein_coding	leukocyte immunoglobulin-like receptor, subfamily B, member 4B
chr10	51359974;51360435	51360346;51360542	+	51359974	51360542	cassetteExon	0.5	100	100	ENSMUST00000218649.2	ENSMUSG00000112023.2	Lilr4b	chr10	protein_coding	leukocyte immunoglobulin-like receptor, subfamily B, member 4B
chr10	51359974	51360613	+	51359974	51360346	A3SS&ES	0.25	50	50	ENSMUST00000219262.2	ENSMUSG00000112023.2	Lilr4b	chr10	protein_coding	leukocyte immunoglobulin-like receptor, subfamily B, member 4B
chr10	51397058	51398491	-	51397058	51398362	A5SS	0.5	50	50	ENSMUST00000219828.2	ENSMUSG00000112766.2	Gm40645	chr10	lncRNA	predicted gene, 40645
chr10	51367328	51368057	+	51367328	51367957	A3SS	0.33	50	50	ENSMUST00000217705.2	ENSMUSG00000112148.2	Lilrb4a	chr10	protein_coding	leukocyte immunoglobulin-like receptor, subfamily B, member 4A
chr10	51367152	51367293	+	51367147	51367293	A5SS	0.33	50	50	ENSMUST00000217705.2	ENSMUSG00000112148.2	Lilrb4a	chr10	protein_coding	leukocyte immunoglobulin-like receptor, subfamily B, member 4A
chr10	51367328	51367957	+	51367328	51367530	A3SS	0.33	50	50	ENSMUST00000219388.2	ENSMUSG00000112148.2	Lilrb4a	chr10	protein_coding	leukocyte immunoglobulin-like receptor, subfamily B, member 4A
chr10	51369301	51370889	+	51370274	51370889	A5SS	0.5	50	50	ENSMUST00000219175.2	ENSMUSG00000112148.2	Lilrb4a	chr10	protein_coding	leukocyte immunoglobulin-like receptor, subfamily B, member 4A
chr10	51369301	51370889	+	51369301	51370175	3pMXE	0.33	50	50	ENSMUST00000220226.2	ENSMUSG00000112148.2	Lilrb4a	chr10	protein_coding	leukocyte immunoglobulin-like receptor, subfamily B, member 4A
chr10	51492802	51502527	-	51492802;51497206	51496994;51502527	ES	0.5	50	50	ENSMUST00000020062.4	ENSMUSG00000019905.9	Gprc6a	chr10	protein_coding	G protein-coupled receptor, family C, group 6, member A
chr10	51497206	51503052	-	51497206	51502527	A5SS	0.5	50	50	ENSMUST00000020062.4	ENSMUSG00000019905.9	Gprc6a	chr10	protein_coding	G protein-coupled receptor, family C, group 6, member A
chr10	51492802	51502527	-	51492802	51496994	A5SS&ES	0.5	50	50	ENSMUST00000218684.2	ENSMUSG00000019905.9	Gprc6a	chr10	protein_coding	G protein-coupled receptor, family C, group 6, member A
chr10	51587986	51589563	+	51587986;51588190	51588077;51589563	ES	0.5	50	50	ENSMUST00000217662.2	ENSMUSG00000019900.20	Rfx6	chr10	protein_coding	regulatory factor X, 6
chr10	51596152	51599097	+	51596152	51597597	3pMXE	0.5	50	50	ENSMUST00000217662.2	ENSMUSG00000019900.20	Rfx6	chr10	protein_coding	regulatory factor X, 6
chr10	51589612	51591974	+	51589612	51591986	A3SS	0.5	50	50	ENSMUST00000217662.2	ENSMUSG00000019900.20	Rfx6	chr10	protein_coding	regulatory factor X, 6
chr10	51561857	51569792	+	51559737	51569792	A5SS	0.5	50	50	ENSMUST00000217662.2	ENSMUSG00000019900.20	Rfx6	chr10	protein_coding	regulatory factor X, 6
chr10	51596152	51599097	+	51596152;51597714	51597597;51599097	ES	0.5	50	50	ENSMUST00000122922.10	ENSMUSG00000019900.20	Rfx6	chr10	protein_coding	regulatory factor X, 6
chr10	51841973	51846243	-	51805874	51846243	A3SS	0.5	50	50	ENSMUST00000218243.2	ENSMUSG00000112659.2	Gm40646	chr10	lncRNA	predicted gene, 40646
chr10	51954080	51958055	-	51954080;51954769	51954600;51958055	ES	0.5	50	50	ENSMUST00000219173.2	ENSMUSG00000019893.14	Ros1	chr10	protein_coding	Ros1 proto-oncogene
chr10	52048997	52056258	-	52048997;52055069	52055043;52056258	ES	0.5	50	50	ENSMUST00000219173.2	ENSMUSG00000019893.14	Ros1	chr10	protein_coding	Ros1 proto-oncogene
chr10	52031374	52037905	-	52031311	52037905	A3SS	0.5	50	50	ENSMUST00000219173.2	ENSMUSG00000019893.14	Ros1	chr10	protein_coding	Ros1 proto-oncogene
chr10	52022056	52031092	-	52022056	52030878	A5SS	0.5	50	50	ENSMUST00000219173.2	ENSMUSG00000019893.14	Ros1	chr10	protein_coding	Ros1 proto-oncogene
chr10	51974998	51976093	-	51967210	51976093	A3SS	0.5	50	50	ENSMUST00000219692.2	ENSMUSG00000019893.14	Ros1	chr10	protein_coding	Ros1 proto-oncogene
chr10	51967210	51972118	-	51967210	51976093	A5SS	0.5	50	50	ENSMUST00000219692.2	ENSMUSG00000019893.14	Ros1	chr10	protein_coding	Ros1 proto-oncogene
chr10	52109931	52160199	+	52109931;52138035	52137823;52160199	ES	0.5	50	50	ENSMUST00000069004.14	ENSMUSG00000019891.16	Dcbld1	chr10	protein_coding	discoidin, CUB  and LCCL domain containing 1
chr10	52230843	52233438	-	52230843	52234845	A5SS	0.33	50	50	ENSMUST00000105475.9	ENSMUSG00000019861.16	Gopc	chr10	protein_coding	golgi associated PDZ and coiled-coil motif containing
chr10	52230843	52234869	-	52230843	52234845	A5SS	0.33	50	50	ENSMUST00000105475.9	ENSMUSG00000019861.16	Gopc	chr10	protein_coding	golgi associated PDZ and coiled-coil motif containing
chr10	52230843;52233461	52233438;52234869	-	52230843	52234869	cassetteExon	0.5	100	100	ENSMUST00000020008.10	ENSMUSG00000019861.16	Gopc	chr10	protein_coding	golgi associated PDZ and coiled-coil motif containing
chr10	52267924	52276455	+	52265222	52276455	A5SS	0.5	50	50	ENSMUST00000219730.2	ENSMUSG00000038624.14	Nepn	chr10	protein_coding	nephrocan
chr10	53221994	53224568	-	53195815	53224568	A3SS	0.5	50	50	ENSMUST00000220443.2	ENSMUSG00000038594.10	Cep85l	chr10	protein_coding	centrosomal protein 85-like
chr10	53154340	53156173	-	53154340	53157445	A5SS	0.5	50	50	ENSMUST00000220443.2	ENSMUSG00000038594.10	Cep85l	chr10	protein_coding	centrosomal protein 85-like
chr10	53225355	53225812	-	53225355	53234145	A5SS	0.5	50	50	ENSMUST00000220443.2	ENSMUSG00000038594.10	Cep85l	chr10	protein_coding	centrosomal protein 85-like
chr10	53234303	53243485	-	53234303	53255605	A5SS	0.33	50	50	ENSMUST00000220443.2	ENSMUSG00000038594.10	Cep85l	chr10	protein_coding	centrosomal protein 85-like
chr10	53234303	53252041	-	53234303	53255605	A5SS	0.33	50	50	ENSMUST00000220443.2	ENSMUSG00000038594.10	Cep85l	chr10	protein_coding	centrosomal protein 85-like
chr10	53234303;53243531	53243485;53252041	-	53234303	53252041	cassetteExon	0.5	100	100	ENSMUST00000095691.7	ENSMUSG00000038594.10	Cep85l	chr10	protein_coding	centrosomal protein 85-like
chr10	53213891	53219853	+	53213891;53218204	53218078;53219853	ES	0.5	50	50	ENSMUST00000219491.2	ENSMUSG00000038583.14	Pln	chr10	protein_coding	phospholamban
chr10	53213891	53219581	+	53213891	53218078	A3SS&ES	0.2	50	50	ENSMUST00000219491.2	ENSMUSG00000038583.14	Pln	chr10	protein_coding	phospholamban
chr10	53213891	53219611	+	53213891	53218078	A3SS&ES	0.2	50	50	ENSMUST00000219491.2	ENSMUSG00000038583.14	Pln	chr10	protein_coding	phospholamban
chr10	53213891	53219924	+	53213891	53218078	A3SS&ES	0.2	50	50	ENSMUST00000219491.2	ENSMUSG00000038583.14	Pln	chr10	protein_coding	phospholamban
chr10	53213891	53219611	+	53213891	53219581	A3SS	0.2	50	50	ENSMUST00000163319.9	ENSMUSG00000038583.14	Pln	chr10	protein_coding	phospholamban
chr10	53213891	53219853	+	53213891	53219581	A3SS	0.2	50	50	ENSMUST00000163319.9	ENSMUSG00000038583.14	Pln	chr10	protein_coding	phospholamban
chr10	53213891	53219924	+	53213891	53219581	A3SS	0.2	50	50	ENSMUST00000163319.9	ENSMUSG00000038583.14	Pln	chr10	protein_coding	phospholamban
chr10	53213891	53219611	+	53213891	53219853	A3SS	0.2	50	50	ENSMUST00000220197.2	ENSMUSG00000038583.14	Pln	chr10	protein_coding	phospholamban
chr10	53213891	53219924	+	53213891	53219853	A3SS	0.2	50	50	ENSMUST00000220197.2	ENSMUSG00000038583.14	Pln	chr10	protein_coding	phospholamban
chr10	53213891	53219924	+	53213891	53219611	A3SS	0.2	50	50	ENSMUST00000218468.2	ENSMUSG00000038583.14	Pln	chr10	protein_coding	phospholamban
chr10	53387320	53390036	+	53387320;53388913	53388725;53390036	ES	0.5	50	50	ENSMUST00000218925.2	ENSMUSG00000112733.2	Gm40650	chr10	lncRNA	predicted gene, 40650
chr10	53484405	53487448	-	53439553	53487448	A3SS	0.33	50	50	ENSMUST00000237608.2	ENSMUSG00000058298.11	Mcm9	chr10	protein_coding	minichromosome maintenance 9 homologous recombination repair factor
chr10	53485110	53487448	-	53439553	53487448	A3SS	0.33	50	50	ENSMUST00000237608.2	ENSMUSG00000058298.11	Mcm9	chr10	protein_coding	minichromosome maintenance 9 homologous recombination repair factor
chr10	53492211	53496230	-	53492148	53496230	A3SS	0.5	50	50	ENSMUST00000237608.2	ENSMUSG00000058298.11	Mcm9	chr10	protein_coding	minichromosome maintenance 9 homologous recombination repair factor
chr10	53417715	53423611	-	53417715	53423499	A5SS	0.5	50	50	ENSMUST00000237608.2	ENSMUSG00000058298.11	Mcm9	chr10	protein_coding	minichromosome maintenance 9 homologous recombination repair factor
chr10	53424795	53472901	-	53424795	53439379	A5SS&ES	0.5	50	50	ENSMUST00000237608.2	ENSMUSG00000058298.11	Mcm9	chr10	protein_coding	minichromosome maintenance 9 homologous recombination repair factor
chr10	53439553	53469228	-	53439553	53487448	A5SS	0.33	50	50	ENSMUST00000237608.2	ENSMUSG00000058298.11	Mcm9	chr10	protein_coding	minichromosome maintenance 9 homologous recombination repair factor
chr10	53439553	53472901	-	53439553	53487448	A5SS	0.33	50	50	ENSMUST00000237608.2	ENSMUSG00000058298.11	Mcm9	chr10	protein_coding	minichromosome maintenance 9 homologous recombination repair factor
chr10	53439553	53472901	-	53439553	53469228	5pMXE	0.33	50	50	ENSMUST00000219547.2	ENSMUSG00000058298.11	Mcm9	chr10	protein_coding	minichromosome maintenance 9 homologous recombination repair factor
chr10	53424795	53472901	-	53424795;53439553	53439379;53472901	ES	0.5	50	50	ENSMUST00000220007.2	ENSMUSG00000058298.11	Mcm9	chr10	protein_coding	minichromosome maintenance 9 homologous recombination repair factor
chr10	53484405	53487448	-	53485110	53487448	A3SS	0.33	50	50	ENSMUST00000218549.3	ENSMUSG00000058298.11	Mcm9	chr10	protein_coding	minichromosome maintenance 9 homologous recombination repair factor
chr10	53482381	53483888	+	53482381	53483761	A3SS	0.5	50	50	ENSMUST00000219271.2	ENSMUSG00000019857.8	Asf1a	chr10	protein_coding	anti-silencing function 1A histone chaperone
chr10	53474201	53478444	+	53473394	53478444	A5SS	0.5	50	50	ENSMUST00000219271.2	ENSMUSG00000019857.8	Asf1a	chr10	protein_coding	anti-silencing function 1A histone chaperone
chr10	53511530	53517041	-	53511530;53514377	53514273;53517041	ES	0.33	50	50	ENSMUST00000020003.15	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53517158	53523668	-	53517158;53523225	53523079;53523668	ES	0.33	50	50	ENSMUST00000020003.15	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53525325	53531063	-	53525325;53528549	53528396;53531063	ES	0.5	50	50	ENSMUST00000020003.15	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53509811;53510491	53510398;53511328	-	53509811	53511328	cassetteExon	0.5	100	100	ENSMUST00000020003.15	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53509811;53510491	53510398;53514273	-	53509811;53511530	53511328;53514273	MXE	0.5	100	100	ENSMUST00000020003.15	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53531275;53538961	53538920;53550662	-	53531275	53550662	cassetteExon	0.5	100	100	ENSMUST00000020003.15	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53511993	53514273	-	53511530	53514273	A3SS	0.33	50	50	ENSMUST00000020003.15	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53509811	53511496	-	53509811	53511328	A5SS	0.2	50	50	ENSMUST00000020003.15	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53553988	53554969	-	53553988	53560332	A5SS	0.5	50	50	ENSMUST00000020003.15	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53509811;53517158	53517041;53523668	-	53509811	53523668	cassetteExon	0.5	100	100	ENSMUST00000218780.2	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53523225	53523668	-	53509811	53523668	A3SS	0.33	50	50	ENSMUST00000218780.2	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53509811	53510398	-	53509811	53523668	A5SS	0.2	50	50	ENSMUST00000218780.2	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53509811	53511328	-	53509811	53523668	A5SS	0.2	50	50	ENSMUST00000218780.2	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53509811	53511496	-	53509811	53523668	A5SS	0.2	50	50	ENSMUST00000218780.2	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53509811;53511530	53511328;53517041	-	53509811	53517041	cassetteExon	0.5	100	100	ENSMUST00000217939.2	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53509811;53511530	53511496;53517041	-	53509811	53517041	cassetteExon	0.5	100	100	ENSMUST00000217939.2	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53514377	53517041	-	53509811	53517041	A3SS	0.33	50	50	ENSMUST00000217939.2	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53509811	53510398	-	53509811	53517041	A5SS	0.2	50	50	ENSMUST00000217939.2	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53510491	53514273	-	53510491;53511993	53511328;53514273	ES	0.33	50	50	ENSMUST00000218659.2	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53511530	53517041	-	53514377	53517041	A3SS&ES	0.33	50	50	ENSMUST00000218659.2	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53509811	53511496	-	53509811	53510398	A5SS&ES	0.2	50	50	ENSMUST00000218659.2	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53510491	53514273	-	53510491;53511530	53511328;53514273	ES	0.33	50	50	ENSMUST00000165986.8	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53517158	53523668	-	53517158	53523079	5pMXE	0.5	50	50	ENSMUST00000169866.2	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53509811;53511530	53511496;53514273	-	53509811;53510491	53510398;53514273	MXE	0.5	100	100	ENSMUST00000169866.2	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53509811;53511530	53511328;53517041	-	53509811;53514377	53510398;53517041	MXE	0.5	100	100	ENSMUST00000169866.2	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53509811;53511530	53511496;53517041	-	53509811;53514377	53510398;53517041	MXE	0.5	100	100	ENSMUST00000169866.2	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53510491;53511530	53511328;53517041	-	53510491;53514377	53514273;53517041	MXE	0.5	100	100	ENSMUST00000169866.2	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53509811;53511993	53511496;53514273	-	53509811;53510491	53510398;53514273	MXE	0.5	100	100	ENSMUST00000169866.2	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53511530	53517041	-	53511530	53514273	5pMXE	0.5	50	50	ENSMUST00000164393.2	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53510491	53514273	-	53511530	53514273	3pMXE	0.33	50	50	ENSMUST00000218682.2	ENSMUSG00000019856.15	Fam184a	chr10	protein_coding	family with sequence similarity 184, member A
chr10	53811108	53890511	-	53811108;53853213	53853119;53890511	ES	0.33	50	50	ENSMUST00000003843.16	ENSMUSG00000003746.17	Man1a	chr10	protein_coding	mannosidase 1, alpha
chr10	53951366	53952559	-	53951366	53951622	5pMXE	0.33	50	50	ENSMUST00000003843.16	ENSMUSG00000003746.17	Man1a	chr10	protein_coding	mannosidase 1, alpha
chr10	53882120	53890511	-	53853213	53890511	A3SS	0.33	50	50	ENSMUST00000003843.16	ENSMUSG00000003746.17	Man1a	chr10	protein_coding	mannosidase 1, alpha
chr10	53951366	53951600	-	53951366	53951622	A5SS	0.33	50	50	ENSMUST00000003843.16	ENSMUSG00000003746.17	Man1a	chr10	protein_coding	mannosidase 1, alpha
chr10	53951366	53952559	-	53951366	53951600	5pMXE	0.33	50	50	ENSMUST00000105470.9	ENSMUSG00000003746.17	Man1a	chr10	protein_coding	mannosidase 1, alpha
chr10	53882120	53890511	-	53811108	53890511	A3SS	0.33	50	50	ENSMUST00000218317.2	ENSMUSG00000003746.17	Man1a	chr10	protein_coding	mannosidase 1, alpha
chr10	53811108	53890511	-	53811108	53853119	5pMXE	0.5	50	50	ENSMUST00000219234.2	ENSMUSG00000003746.17	Man1a	chr10	protein_coding	mannosidase 1, alpha
chr10	53811108	53890511	-	53853213	53890511	3pMXE	0.33	50	50	ENSMUST00000146483.8	ENSMUSG00000003746.17	Man1a	chr10	protein_coding	mannosidase 1, alpha
chr10	56253614	56274302	+	56253614	56263630	3pMXE	0.33	50	50	ENSMUST00000068581.9	ENSMUSG00000050953.11	Gja1	chr10	protein_coding	gap junction protein, alpha 1
chr10	56253614;56262809	56262675;56263630	+	56253614	56263630	cassetteExon	0.5	100	100	ENSMUST00000068581.9	ENSMUSG00000050953.11	Gja1	chr10	protein_coding	gap junction protein, alpha 1
chr10	56253721	56263630	+	56253614	56263630	A5SS	0.16	50	50	ENSMUST00000068581.9	ENSMUSG00000050953.11	Gja1	chr10	protein_coding	gap junction protein, alpha 1
chr10	56253816	56263630	+	56253614	56263630	A5SS	0.16	50	50	ENSMUST00000068581.9	ENSMUSG00000050953.11	Gja1	chr10	protein_coding	gap junction protein, alpha 1
chr10	56254604	56263630	+	56253614	56263630	A5SS	0.16	50	50	ENSMUST00000068581.9	ENSMUSG00000050953.11	Gja1	chr10	protein_coding	gap junction protein, alpha 1
chr10	56255483	56263630	+	56253614	56263630	A5SS	0.16	50	50	ENSMUST00000068581.9	ENSMUSG00000050953.11	Gja1	chr10	protein_coding	gap junction protein, alpha 1
chr10	56253721	56263630	+	56262809	56263630	A5SS&ES	0.16	50	50	ENSMUST00000217789.2	ENSMUSG00000050953.11	Gja1	chr10	protein_coding	gap junction protein, alpha 1
chr10	56253816	56263630	+	56262809	56263630	A5SS&ES	0.16	50	50	ENSMUST00000217789.2	ENSMUSG00000050953.11	Gja1	chr10	protein_coding	gap junction protein, alpha 1
chr10	56254604	56263630	+	56262809	56263630	A5SS&ES	0.16	50	50	ENSMUST00000217789.2	ENSMUSG00000050953.11	Gja1	chr10	protein_coding	gap junction protein, alpha 1
chr10	56255483	56263630	+	56262809	56263630	A5SS&ES	0.16	50	50	ENSMUST00000217789.2	ENSMUSG00000050953.11	Gja1	chr10	protein_coding	gap junction protein, alpha 1
chr10	56253614	56262675	+	56253614	56274302	A3SS	0.33	50	50	ENSMUST00000220204.2	ENSMUSG00000050953.11	Gja1	chr10	protein_coding	gap junction protein, alpha 1
chr10	56253721	56263630	+	56253816	56263630	A5SS	0.16	50	50	ENSMUST00000220194.2	ENSMUSG00000050953.11	Gja1	chr10	protein_coding	gap junction protein, alpha 1
chr10	56254604	56263630	+	56253816	56263630	A5SS	0.16	50	50	ENSMUST00000220194.2	ENSMUSG00000050953.11	Gja1	chr10	protein_coding	gap junction protein, alpha 1
chr10	56255483	56263630	+	56253816	56263630	A5SS	0.16	50	50	ENSMUST00000220194.2	ENSMUSG00000050953.11	Gja1	chr10	protein_coding	gap junction protein, alpha 1
chr10	56254604	56263630	+	56253721	56263630	A5SS	0.16	50	50	ENSMUST00000218834.2	ENSMUSG00000050953.11	Gja1	chr10	protein_coding	gap junction protein, alpha 1
chr10	56255483	56263630	+	56253721	56263630	A5SS	0.16	50	50	ENSMUST00000218834.2	ENSMUSG00000050953.11	Gja1	chr10	protein_coding	gap junction protein, alpha 1
chr10	56255483	56263630	+	56254604	56263630	A5SS	0.16	50	50	ENSMUST00000218444.2	ENSMUSG00000050953.11	Gja1	chr10	protein_coding	gap junction protein, alpha 1
chr10	57362697;57367025	57366954;57371994	+	57362697	57371994	cassetteExon	0.5	100	100	ENSMUST00000220353.2	ENSMUSG00000019878.9	Hsf2	chr10	protein_coding	heat shock factor 2
chr10	57378806	57380678	+	57378806	57380646	A3SS	0.5	50	50	ENSMUST00000220353.2	ENSMUSG00000019878.9	Hsf2	chr10	protein_coding	heat shock factor 2
chr10	57382398;57385210	57385157;57387540	+	57382398	57387540	cassetteExon	0.5	100	100	ENSMUST00000079833.6	ENSMUSG00000019878.9	Hsf2	chr10	protein_coding	heat shock factor 2
chr10	57400083	57400416	-	57400194	57400416	A3SS	0.5	50	50	ENSMUST00000020027.11	ENSMUSG00000019877.11	Serinc1	chr10	protein_coding	serine incorporator 1
chr10	57400495	57401462	-	57400495	57401421	A5SS	0.5	50	50	ENSMUST00000020027.11	ENSMUSG00000019877.11	Serinc1	chr10	protein_coding	serine incorporator 1
chr10	57568366	57604186	+	57568366;57584277	57584170;57604186	ES	0.33	50	50	ENSMUST00000095668.10	ENSMUSG00000019876.16	Pkib	chr10	protein_coding	protein kinase inhibitor beta, cAMP dependent, testis specific
chr10	57568366;57575830	57575719;57604186	+	57568366;57584277	57584170;57604186	MXE	0.5	100	100	ENSMUST00000095668.10	ENSMUSG00000019876.16	Pkib	chr10	protein_coding	protein kinase inhibitor beta, cAMP dependent, testis specific
chr10	57517197	57528178	+	57508303	57528178	A5SS	0.16	50	50	ENSMUST00000095668.10	ENSMUSG00000019876.16	Pkib	chr10	protein_coding	protein kinase inhibitor beta, cAMP dependent, testis specific
chr10	57522051	57528178	+	57508303	57528178	A5SS	0.16	50	50	ENSMUST00000095668.10	ENSMUSG00000019876.16	Pkib	chr10	protein_coding	protein kinase inhibitor beta, cAMP dependent, testis specific
chr10	57522547	57528178	+	57508303	57528178	A5SS	0.16	50	50	ENSMUST00000095668.10	ENSMUSG00000019876.16	Pkib	chr10	protein_coding	protein kinase inhibitor beta, cAMP dependent, testis specific
chr10	57527401	57528178	+	57508303	57528178	A5SS	0.16	50	50	ENSMUST00000095668.10	ENSMUSG00000019876.16	Pkib	chr10	protein_coding	protein kinase inhibitor beta, cAMP dependent, testis specific
chr10	57527497	57528178	+	57508303	57528178	A5SS	0.16	50	50	ENSMUST00000095668.10	ENSMUSG00000019876.16	Pkib	chr10	protein_coding	protein kinase inhibitor beta, cAMP dependent, testis specific
chr10	57568366;57575830	57575719;57604186	+	57568366	57604186	cassetteExon	0.5	100	100	ENSMUST00000075992.12	ENSMUSG00000019876.16	Pkib	chr10	protein_coding	protein kinase inhibitor beta, cAMP dependent, testis specific
chr10	57568366	57604186	+	57568366	57584170	3pMXE	0.33	50	50	ENSMUST00000177299.8	ENSMUSG00000019876.16	Pkib	chr10	protein_coding	protein kinase inhibitor beta, cAMP dependent, testis specific
chr10	57568366	57575719	+	57568366	57584170	A3SS	0.33	50	50	ENSMUST00000177299.8	ENSMUSG00000019876.16	Pkib	chr10	protein_coding	protein kinase inhibitor beta, cAMP dependent, testis specific
chr10	57522051	57528178	+	57517197	57528178	A5SS	0.16	50	50	ENSMUST00000176741.8	ENSMUSG00000019876.16	Pkib	chr10	protein_coding	protein kinase inhibitor beta, cAMP dependent, testis specific
chr10	57522547	57528178	+	57517197	57528178	A5SS	0.16	50	50	ENSMUST00000176741.8	ENSMUSG00000019876.16	Pkib	chr10	protein_coding	protein kinase inhibitor beta, cAMP dependent, testis specific
chr10	57527401	57528178	+	57517197	57528178	A5SS	0.16	50	50	ENSMUST00000176741.8	ENSMUSG00000019876.16	Pkib	chr10	protein_coding	protein kinase inhibitor beta, cAMP dependent, testis specific
chr10	57527497	57528178	+	57517197	57528178	A5SS	0.16	50	50	ENSMUST00000176741.8	ENSMUSG00000019876.16	Pkib	chr10	protein_coding	protein kinase inhibitor beta, cAMP dependent, testis specific
chr10	57522051;57522547	57522512;57528178	+	57522051	57528178	cassetteExon	0.5	100	100	ENSMUST00000177325.8	ENSMUSG00000019876.16	Pkib	chr10	protein_coding	protein kinase inhibitor beta, cAMP dependent, testis specific
chr10	57527401	57528178	+	57522051	57528178	A5SS	0.16	50	50	ENSMUST00000177325.8	ENSMUSG00000019876.16	Pkib	chr10	protein_coding	protein kinase inhibitor beta, cAMP dependent, testis specific
chr10	57527497	57528178	+	57522051	57528178	A5SS	0.16	50	50	ENSMUST00000177325.8	ENSMUSG00000019876.16	Pkib	chr10	protein_coding	protein kinase inhibitor beta, cAMP dependent, testis specific
chr10	57527401	57528178	+	57522547	57528178	A5SS	0.25	50	50	ENSMUST00000177473.8	ENSMUSG00000019876.16	Pkib	chr10	protein_coding	protein kinase inhibitor beta, cAMP dependent, testis specific
chr10	57527497	57528178	+	57522547	57528178	A5SS	0.25	50	50	ENSMUST00000177473.8	ENSMUSG00000019876.16	Pkib	chr10	protein_coding	protein kinase inhibitor beta, cAMP dependent, testis specific
chr10	57527401	57528178	+	57527497	57528178	A5SS	0.16	50	50	ENSMUST00000066028.13	ENSMUSG00000019876.16	Pkib	chr10	protein_coding	protein kinase inhibitor beta, cAMP dependent, testis specific
chr10	57670880	57677007	+	57670505	57677007	A5SS	0.5	50	50	ENSMUST00000151623.8	ENSMUSG00000019872.14	Smpdl3a	chr10	protein_coding	sphingomyelin phosphodiesterase, acid-like 3A
chr10	58091704	58094063	+	58091704;58092726	58092642;58094063	ES	0.33	50	50	ENSMUST00000057659.14	ENSMUSG00000038039.14	Gcc2	chr10	protein_coding	GRIP and coiled-coil domain containing 2
chr10	58091704	58092569	+	58091704	58092642	A3SS	0.33	50	50	ENSMUST00000057659.14	ENSMUSG00000038039.14	Gcc2	chr10	protein_coding	GRIP and coiled-coil domain containing 2
chr10	58110856	58112361	+	58110856	58112400	A3SS	0.5	50	50	ENSMUST00000057659.14	ENSMUSG00000038039.14	Gcc2	chr10	protein_coding	GRIP and coiled-coil domain containing 2
chr10	58130727	58131922	+	58130727	58131910	A3SS	0.5	50	50	ENSMUST00000057659.14	ENSMUSG00000038039.14	Gcc2	chr10	protein_coding	GRIP and coiled-coil domain containing 2
chr10	58091747	58092642	+	58091704	58092642	A5SS	0.5	50	50	ENSMUST00000057659.14	ENSMUSG00000038039.14	Gcc2	chr10	protein_coding	GRIP and coiled-coil domain containing 2
chr10	58092718	58094063	+	58092726	58094063	A5SS	0.33	50	50	ENSMUST00000057659.14	ENSMUSG00000038039.14	Gcc2	chr10	protein_coding	GRIP and coiled-coil domain containing 2
chr10	58091704	58094063	+	58091704;58092718	58092642;58094063	ES	0.33	50	50	ENSMUST00000162984.2	ENSMUSG00000038039.14	Gcc2	chr10	protein_coding	GRIP and coiled-coil domain containing 2
chr10	58091704	58094063	+	58091704;58092726	58092569;58094063	ES	0.33	50	50	ENSMUST00000162041.8	ENSMUSG00000038039.14	Gcc2	chr10	protein_coding	GRIP and coiled-coil domain containing 2
chr10	58091704;58092718	58092569;58094063	+	58091704	58094063	cassetteExon	0.5	100	100	ENSMUST00000162860.8	ENSMUSG00000038039.14	Gcc2	chr10	protein_coding	GRIP and coiled-coil domain containing 2
chr10	58254296;58254608	58254469;58257276	+	58254296	58257276	cassetteExon	0.5	100	100	ENSMUST00000020078.14	ENSMUSG00000019920.19	Lims1	chr10	protein_coding	LIM and senescent cell antigen-like domains 1
chr10	58254296;58254657	58254469;58257276	+	58254296	58257276	cassetteExon	0.5	100	100	ENSMUST00000020078.14	ENSMUSG00000019920.19	Lims1	chr10	protein_coding	LIM and senescent cell antigen-like domains 1
chr10	58254296;58254608	58254470;58257276	+	58254296	58257276	cassetteExon	0.5	100	100	ENSMUST00000020078.14	ENSMUSG00000019920.19	Lims1	chr10	protein_coding	LIM and senescent cell antigen-like domains 1
chr10	58254296;58254657	58254470;58257276	+	58254296	58257276	cassetteExon	0.5	100	100	ENSMUST00000020078.14	ENSMUSG00000019920.19	Lims1	chr10	protein_coding	LIM and senescent cell antigen-like domains 1
chr10	58207521	58234843	+	58159509	58234843	A5SS	0.33	50	50	ENSMUST00000020078.14	ENSMUSG00000019920.19	Lims1	chr10	protein_coding	LIM and senescent cell antigen-like domains 1
chr10	58230422	58234843	+	58159509	58234843	A5SS	0.33	50	50	ENSMUST00000020078.14	ENSMUSG00000019920.19	Lims1	chr10	protein_coding	LIM and senescent cell antigen-like domains 1
chr10	58230422	58234843	+	58207521	58234843	A5SS	0.33	50	50	ENSMUST00000238939.2	ENSMUSG00000019920.19	Lims1	chr10	protein_coding	LIM and senescent cell antigen-like domains 1
chr10	58254296	58254470	+	58254296	58254469	A3SS	0.33	50	50	ENSMUST00000020077.11	ENSMUSG00000019920.19	Lims1	chr10	protein_coding	LIM and senescent cell antigen-like domains 1
chr10	58254657	58257276	+	58254608	58257276	A5SS	0.33	50	50	ENSMUST00000020077.11	ENSMUSG00000019920.19	Lims1	chr10	protein_coding	LIM and senescent cell antigen-like domains 1
chr10	58283192	58287806	+	58282873	58287806	A5SS	0.5	50	50	ENSMUST00000219332.2	ENSMUSG00000003226.8	Ranbp2	chr10	protein_coding	RAN binding protein 2
chr10	58335241	58336019	+	58335241	58343343	A3SS	0.5	50	50	ENSMUST00000036576.10	ENSMUSG00000038010.10	Ccdc138	chr10	protein_coding	coiled-coil domain containing 138
chr10	58334497	58334991	+	58333884	58334991	A5SS	0.5	50	50	ENSMUST00000036576.10	ENSMUSG00000038010.10	Ccdc138	chr10	protein_coding	coiled-coil domain containing 138
chr10	58919440;58920857	58920804;58922482	+	58919440	58922482	cassetteExon	0.5	100	100	ENSMUST00000153031.2	ENSMUSG00000037990.19	Sh3rf3	chr10	protein_coding	SH3 domain containing ring finger 3
chr10	58901924	58907758	+	58885402	58907758	A5SS	0.5	50	50	ENSMUST00000153031.2	ENSMUSG00000037990.19	Sh3rf3	chr10	protein_coding	SH3 domain containing ring finger 3
chr10	58915926	58919270	+	58907858	58919270	A5SS	0.5	50	50	ENSMUST00000153031.2	ENSMUSG00000037990.19	Sh3rf3	chr10	protein_coding	SH3 domain containing ring finger 3
chr10	59000766	59002326	-	58977562	59002326	A3SS	0.5	50	50	ENSMUST00000220156.2	ENSMUSG00000019917.11	Septin10	chr10	protein_coding	septin 10
chr10	59179616	59186226	+	59179616;59184242	59184003;59186226	ES	0.5	50	50	ENSMUST00000009789.15	ENSMUSG00000019916.15	P4ha1	chr10	protein_coding	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide
chr10	59188081;59191242	59191172;59197683	+	59188081;59190232	59190162;59197683	MXE	0.5	100	100	ENSMUST00000009789.15	ENSMUSG00000019916.15	P4ha1	chr10	protein_coding	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide
chr10	59252335	59257194	+	59252335	59257285	A3SS	0.5	50	50	ENSMUST00000009790.14	ENSMUSG00000009646.14	Pla2g12b	chr10	protein_coding	phospholipase A2, group XIIB
chr10	59436515	59452346	-	59326978	59452346	A3SS	0.25	50	50	ENSMUST00000020312.13	ENSMUSG00000009647.14	Mcu	chr10	protein_coding	mitochondrial calcium uniporter
chr10	59438999	59452346	-	59326978	59452346	A3SS	0.25	50	50	ENSMUST00000020312.13	ENSMUSG00000009647.14	Mcu	chr10	protein_coding	mitochondrial calcium uniporter
chr10	59441999	59452346	-	59326978	59452346	A3SS	0.25	50	50	ENSMUST00000020312.13	ENSMUSG00000009647.14	Mcu	chr10	protein_coding	mitochondrial calcium uniporter
chr10	59292631	59293648	-	59292631	59302276	A5SS	0.5	50	50	ENSMUST00000020312.13	ENSMUSG00000009647.14	Mcu	chr10	protein_coding	mitochondrial calcium uniporter
chr10	59438999	59452346	-	59436515	59452346	A3SS	0.33	50	50	ENSMUST00000161435.2	ENSMUSG00000009647.14	Mcu	chr10	protein_coding	mitochondrial calcium uniporter
chr10	59441999	59452346	-	59436515	59452346	A3SS	0.33	50	50	ENSMUST00000161435.2	ENSMUSG00000009647.14	Mcu	chr10	protein_coding	mitochondrial calcium uniporter
chr10	59438999	59452346	-	59438999;59441999	59441955;59452346	ES	0.5	50	50	ENSMUST00000161168.2	ENSMUSG00000009647.14	Mcu	chr10	protein_coding	mitochondrial calcium uniporter
chr10	59586369;59592539	59592528;59603960	+	59586369	59603960	cassetteExon	0.5	100	100	ENSMUST00000165563.8	ENSMUSG00000020111.16	Micu1	chr10	protein_coding	mitochondrial calcium uptake 1
chr10	59538509	59563814	+	59538509	59563779	A3SS	0.5	50	50	ENSMUST00000165563.8	ENSMUSG00000020111.16	Micu1	chr10	protein_coding	mitochondrial calcium uptake 1
chr10	59576117	59576482	+	59568979	59576482	A5SS	0.5	50	50	ENSMUST00000165563.8	ENSMUSG00000020111.16	Micu1	chr10	protein_coding	mitochondrial calcium uptake 1
chr10	59598478	59603960	+	59586369	59603960	A5SS	0.25	50	50	ENSMUST00000165563.8	ENSMUSG00000020111.16	Micu1	chr10	protein_coding	mitochondrial calcium uptake 1
chr10	59602911	59603960	+	59586369	59603960	A5SS	0.25	50	50	ENSMUST00000165563.8	ENSMUSG00000020111.16	Micu1	chr10	protein_coding	mitochondrial calcium uptake 1
chr10	59592539	59603960	+	59592539;59602911	59602906;59603960	ES	0.25	50	50	ENSMUST00000020311.13	ENSMUSG00000020111.16	Micu1	chr10	protein_coding	mitochondrial calcium uptake 1
chr10	59598478	59603960	+	59602911	59603960	A5SS&ES	0.25	50	50	ENSMUST00000020311.13	ENSMUSG00000020111.16	Micu1	chr10	protein_coding	mitochondrial calcium uptake 1
chr10	59598478	59603960	+	59592539	59603960	A5SS	0.25	50	50	ENSMUST00000092508.12	ENSMUSG00000020111.16	Micu1	chr10	protein_coding	mitochondrial calcium uptake 1
chr10	59586369	59603960	+	59586369	59592528	3pMXE	0.5	50	50	ENSMUST00000167612.2	ENSMUSG00000020111.16	Micu1	chr10	protein_coding	mitochondrial calcium uptake 1
chr10	59726030	59728494	+	59726030;59726807	59726662;59728494	ES	0.5	50	50	ENSMUST00000147914.8	ENSMUSG00000020109.14	Dnajb12	chr10	protein_coding	DnaJ heat shock protein family (Hsp40) member B12
chr10	59732317	59733313	+	59732269	59733313	A5SS	0.33	50	50	ENSMUST00000147914.8	ENSMUSG00000020109.14	Dnajb12	chr10	protein_coding	DnaJ heat shock protein family (Hsp40) member B12
chr10	59732323	59733313	+	59732269	59733313	A5SS	0.33	50	50	ENSMUST00000147914.8	ENSMUSG00000020109.14	Dnajb12	chr10	protein_coding	DnaJ heat shock protein family (Hsp40) member B12
chr10	59732323	59733313	+	59732317	59733313	A5SS	0.33	50	50	ENSMUST00000131810.8	ENSMUSG00000020109.14	Dnajb12	chr10	protein_coding	DnaJ heat shock protein family (Hsp40) member B12
chr10	59826729	59838778	-	59826729;59832436	59832270;59838778	ES	0.33	50	50	ENSMUST00000182898.8	ENSMUSG00000020107.11	Anapc16	chr10	protein_coding	anaphase promoting complex subunit 16
chr10	59824660;59826396	59826181;59826655	-	59824660	59826655	cassetteExon	0.5	100	100	ENSMUST00000182898.8	ENSMUSG00000020107.11	Anapc16	chr10	protein_coding	anaphase promoting complex subunit 16
chr10	59826729;59838289	59838240;59838778	-	59826729;59832436	59832270;59838778	MXE	0.5	100	100	ENSMUST00000182898.8	ENSMUSG00000020107.11	Anapc16	chr10	protein_coding	anaphase promoting complex subunit 16
chr10	59832436;59838289	59838240;59838778	-	59832436	59838778	cassetteExon	0.5	100	100	ENSMUST00000182898.8	ENSMUSG00000020107.11	Anapc16	chr10	protein_coding	anaphase promoting complex subunit 16
chr10	59826729	59838240	-	59826729;59832436	59832270;59838240	ES	0.5	50	50	ENSMUST00000020307.11	ENSMUSG00000020107.11	Anapc16	chr10	protein_coding	anaphase promoting complex subunit 16
chr10	59824660	59826655	-	59824660	59826181	5pMXE	0.5	50	50	ENSMUST00000182925.2	ENSMUSG00000020107.11	Anapc16	chr10	protein_coding	anaphase promoting complex subunit 16
chr10	59826729	59838778	-	59826729;59838289	59838240;59838778	ES	0.33	50	50	ENSMUST00000182116.8	ENSMUSG00000020107.11	Anapc16	chr10	protein_coding	anaphase promoting complex subunit 16
chr10	59832436	59838778	-	59832436	59838240	5pMXE	0.5	50	50	ENSMUST00000182152.2	ENSMUSG00000020107.11	Anapc16	chr10	protein_coding	anaphase promoting complex subunit 16
chr10	59824660	59826655	-	59826396	59826655	3pMXE	0.5	50	50	ENSMUST00000183093.2	ENSMUSG00000020107.11	Anapc16	chr10	protein_coding	anaphase promoting complex subunit 16
chr10	59849596	59877943	+	59849596	59861545	3pMXE	0.5	50	50	ENSMUST00000219778.2	ENSMUSG00000044475.15	Ascc1	chr10	protein_coding	activating signal cointegrator 1 complex subunit 1
chr10	59839238	59840617	+	59838729	59840617	A5SS	0.5	50	50	ENSMUST00000219778.2	ENSMUSG00000044475.15	Ascc1	chr10	protein_coding	activating signal cointegrator 1 complex subunit 1
chr10	59942478;59950903	59950895;59957300	+	59942478;59957062	59957054;59957300	MXE	0.5	100	100	ENSMUST00000138976.3	ENSMUSG00000058297.17	Spock2	chr10	protein_coding	sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2
chr10	60131782;60133325	60133317;60134877	+	60131782	60134877	cassetteExon	0.5	100	100	ENSMUST00000105465.8	ENSMUSG00000004207.15	Psap	chr10	protein_coding	prosaposin
chr10	60131782	60134871	+	60131782	60134877	A3SS	0.33	50	50	ENSMUST00000105465.8	ENSMUSG00000004207.15	Psap	chr10	protein_coding	prosaposin
chr10	60120353	60127421	+	60113604	60127421	A5SS	0.5	50	50	ENSMUST00000105465.8	ENSMUSG00000004207.15	Psap	chr10	protein_coding	prosaposin
chr10	60134825	60134877	+	60131782	60134877	A5SS	0.33	50	50	ENSMUST00000105465.8	ENSMUSG00000004207.15	Psap	chr10	protein_coding	prosaposin
chr10	60131782	60134871	+	60131782	60133317	A3SS&ES	0.33	50	50	ENSMUST00000179238.8	ENSMUSG00000004207.15	Psap	chr10	protein_coding	prosaposin
chr10	60134825	60134877	+	60133325	60134877	A5SS	0.33	50	50	ENSMUST00000179238.8	ENSMUSG00000004207.15	Psap	chr10	protein_coding	prosaposin
chr10	60139479	60140604	-	60139479;60140307	60140203;60140604	ES	0.5	50	50	ENSMUST00000073242.11	ENSMUSG00000012819.17	Cdh23	chr10	protein_coding	cadherin 23 (otocadherin)
chr10	60222842	60228751	-	60222842;60227649	60227501;60228751	ES	0.5	50	50	ENSMUST00000073242.11	ENSMUSG00000012819.17	Cdh23	chr10	protein_coding	cadherin 23 (otocadherin)
chr10	60215125;60215238	60215236;60218433	-	60215125	60218433	cassetteExon	0.5	100	100	ENSMUST00000073242.11	ENSMUSG00000012819.17	Cdh23	chr10	protein_coding	cadherin 23 (otocadherin)
chr10	60215125;60218277	60218275;60218433	-	60215125	60218433	cassetteExon	0.5	100	100	ENSMUST00000073242.11	ENSMUSG00000012819.17	Cdh23	chr10	protein_coding	cadherin 23 (otocadherin)
chr10	60419073	60432494	-	60370364	60432494	A3SS	0.5	50	50	ENSMUST00000073242.11	ENSMUSG00000012819.17	Cdh23	chr10	protein_coding	cadherin 23 (otocadherin)
chr10	60467190	60485869	-	60433537	60485869	A3SS	0.5	50	50	ENSMUST00000073242.11	ENSMUSG00000012819.17	Cdh23	chr10	protein_coding	cadherin 23 (otocadherin)
chr10	60139479	60140195	-	60139479	60140203	A5SS	0.33	50	50	ENSMUST00000073242.11	ENSMUSG00000012819.17	Cdh23	chr10	protein_coding	cadherin 23 (otocadherin)
chr10	60140307	60140440	-	60140307	60140604	A5SS	0.5	50	50	ENSMUST00000073242.11	ENSMUSG00000012819.17	Cdh23	chr10	protein_coding	cadherin 23 (otocadherin)
chr10	60155462	60157031	-	60155462	60159068	A5SS	0.5	50	50	ENSMUST00000073242.11	ENSMUSG00000012819.17	Cdh23	chr10	protein_coding	cadherin 23 (otocadherin)
chr10	60215125	60215881	-	60215125	60218433	A5SS	0.25	50	50	ENSMUST00000073242.11	ENSMUSG00000012819.17	Cdh23	chr10	protein_coding	cadherin 23 (otocadherin)
chr10	60301931	60310796	-	60301931	60322763	A5SS	0.33	50	50	ENSMUST00000073242.11	ENSMUSG00000012819.17	Cdh23	chr10	protein_coding	cadherin 23 (otocadherin)
chr10	60301931	60322769	-	60301931	60322763	A5SS	0.33	50	50	ENSMUST00000073242.11	ENSMUSG00000012819.17	Cdh23	chr10	protein_coding	cadherin 23 (otocadherin)
chr10	60359343	60366717	-	60359343	60366726	A5SS	0.5	50	50	ENSMUST00000073242.11	ENSMUSG00000012819.17	Cdh23	chr10	protein_coding	cadherin 23 (otocadherin)
chr10	60485946	60488782	-	60485946	60493046	A5SS	0.5	50	50	ENSMUST00000073242.11	ENSMUSG00000012819.17	Cdh23	chr10	protein_coding	cadherin 23 (otocadherin)
chr10	60139479;60140307	60140195;60140604	-	60139479	60140604	cassetteExon	0.5	100	100	ENSMUST00000105462.8	ENSMUSG00000012819.17	Cdh23	chr10	protein_coding	cadherin 23 (otocadherin)
chr10	60215125;60215238	60215236;60218433	-	60215125;60218277	60218275;60218433	MXE	0.5	100	100	ENSMUST00000105464.9	ENSMUSG00000012819.17	Cdh23	chr10	protein_coding	cadherin 23 (otocadherin)
chr10	60301931;60310801	60310796;60322769	-	60301931	60322769	cassetteExon	0.5	100	100	ENSMUST00000105464.9	ENSMUSG00000012819.17	Cdh23	chr10	protein_coding	cadherin 23 (otocadherin)
chr10	60215125	60215881	-	60215125	60218275	A5SS	0.25	50	50	ENSMUST00000105464.9	ENSMUSG00000012819.17	Cdh23	chr10	protein_coding	cadherin 23 (otocadherin)
chr10	60215125	60215881	-	60215125	60215236	A5SS&ES	0.25	50	50	ENSMUST00000105463.9	ENSMUSG00000012819.17	Cdh23	chr10	protein_coding	cadherin 23 (otocadherin)
chr10	60139479	60140604	-	60139479	60140195	A5SS	0.33	50	50	ENSMUST00000135638.8	ENSMUSG00000012819.17	Cdh23	chr10	protein_coding	cadherin 23 (otocadherin)
chr10	60139479	60140604	-	60139479	60140203	A5SS&ES	0.33	50	50	ENSMUST00000128249.8	ENSMUSG00000012819.17	Cdh23	chr10	protein_coding	cadherin 23 (otocadherin)
chr10	60182882	60193588	+	60182882	60193621	A3SS	0.33	50	50	ENSMUST00000020301.14	ENSMUSG00000020101.15	Vsir	chr10	protein_coding	V-set immunoregulatory receptor
chr10	60182882	60193824	+	60182882	60193621	A3SS	0.33	50	50	ENSMUST00000020301.14	ENSMUSG00000020101.15	Vsir	chr10	protein_coding	V-set immunoregulatory receptor
chr10	60203572	60204311	+	60203572	60204308	A3SS	0.5	50	50	ENSMUST00000020301.14	ENSMUSG00000020101.15	Vsir	chr10	protein_coding	V-set immunoregulatory receptor
chr10	60185192	60193621	+	60182882	60193621	A5SS	0.5	50	50	ENSMUST00000020301.14	ENSMUSG00000020101.15	Vsir	chr10	protein_coding	V-set immunoregulatory receptor
chr10	60193914	60199980	+	60194773	60199980	A5SS&ES	0.5	50	50	ENSMUST00000020301.14	ENSMUSG00000020101.15	Vsir	chr10	protein_coding	V-set immunoregulatory receptor
chr10	60182882	60193588	+	60182882	60193824	A3SS	0.33	50	50	ENSMUST00000164027.2	ENSMUSG00000020101.15	Vsir	chr10	protein_coding	V-set immunoregulatory receptor
chr10	60235798	60238732	+	60235755	60238732	A5SS	0.33	50	50	ENSMUST00000164428.3	ENSMUSG00000090439.4	Gm17455	chr10	protein_coding	predicted gene, 17455
chr10	60236594	60238732	+	60235755	60238732	A5SS	0.33	50	50	ENSMUST00000164428.3	ENSMUSG00000090439.4	Gm17455	chr10	protein_coding	predicted gene, 17455
chr10	60236594	60238732	+	60235798	60238732	A5SS	0.33	50	50	ENSMUST00000218974.2	ENSMUSG00000090439.4	Gm17455	chr10	protein_coding	predicted gene, 17455
chr10	60552269	60559543	-	60552269;60556802	60556640;60559543	ES	0.5	50	50	ENSMUST00000117513.8	ENSMUSG00000020100.16	Slc29a3	chr10	protein_coding	solute carrier family 29 (nucleoside transporters), member 3
chr10	60556802	60566349	-	60556802;60559769	60559543;60566349	ES	0.5	50	50	ENSMUST00000117513.8	ENSMUSG00000020100.16	Slc29a3	chr10	protein_coding	solute carrier family 29 (nucleoside transporters), member 3
chr10	60552269;60555164	60554932;60556640	-	60552269	60556640	cassetteExon	0.5	100	100	ENSMUST00000117513.8	ENSMUSG00000020100.16	Slc29a3	chr10	protein_coding	solute carrier family 29 (nucleoside transporters), member 3
chr10	60566454	60586165	-	60566431	60586165	A3SS	0.5	50	50	ENSMUST00000117513.8	ENSMUSG00000020100.16	Slc29a3	chr10	protein_coding	solute carrier family 29 (nucleoside transporters), member 3
chr10	60552269;60556802	60556640;60566349	-	60552269;60559769	60559543;60566349	MXE	0.5	100	100	ENSMUST00000119595.8	ENSMUSG00000020100.16	Slc29a3	chr10	protein_coding	solute carrier family 29 (nucleoside transporters), member 3
chr10	60552269	60554932	-	60552269	60559543	A5SS	0.33	50	50	ENSMUST00000119595.8	ENSMUSG00000020100.16	Slc29a3	chr10	protein_coding	solute carrier family 29 (nucleoside transporters), member 3
chr10	60556802	60566349	-	60556802	60559543	5pMXE	0.5	50	50	ENSMUST00000127386.8	ENSMUSG00000020100.16	Slc29a3	chr10	protein_coding	solute carrier family 29 (nucleoside transporters), member 3
chr10	60610939	60613169	-	60610939;60612996	60612964;60613169	ES	0.5	50	50	ENSMUST00000077925.7	ENSMUSG00000020099.9	Unc5b	chr10	protein_coding	unc-5 netrin receptor B
chr10	60619061	60656032	-	60619061	60666866	A5SS	0.5	50	50	ENSMUST00000077925.7	ENSMUSG00000020099.9	Unc5b	chr10	protein_coding	unc-5 netrin receptor B
chr10	60925195;60927974	60927843;60928383	+	60925195	60928383	cassetteExon	0.5	100	100	ENSMUST00000218005.2	ENSMUSG00000020098.8	Pcbd1	chr10	protein_coding	pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 1
chr10	60937842	60938347	-	60937580	60938347	A3SS	0.5	50	50	ENSMUST00000122259.8	ENSMUSG00000020097.15	Sgpl1	chr10	protein_coding	sphingosine phosphate lyase 1
chr10	60949924	60953474	-	60949936	60953474	A3SS	0.33	50	50	ENSMUST00000122259.8	ENSMUSG00000020097.15	Sgpl1	chr10	protein_coding	sphingosine phosphate lyase 1
chr10	60953346	60953474	-	60949936	60953474	A3SS	0.33	50	50	ENSMUST00000122259.8	ENSMUSG00000020097.15	Sgpl1	chr10	protein_coding	sphingosine phosphate lyase 1
chr10	60982110	60983364	-	60982110	60983302	A5SS	0.33	50	50	ENSMUST00000122259.8	ENSMUSG00000020097.15	Sgpl1	chr10	protein_coding	sphingosine phosphate lyase 1
chr10	60982110	60983395	-	60982110	60983302	A5SS	0.33	50	50	ENSMUST00000122259.8	ENSMUSG00000020097.15	Sgpl1	chr10	protein_coding	sphingosine phosphate lyase 1
chr10	60982110	60983395	-	60982110	60983364	A5SS	0.33	50	50	ENSMUST00000092498.12	ENSMUSG00000020097.15	Sgpl1	chr10	protein_coding	sphingosine phosphate lyase 1
chr10	60953346	60953474	-	60949924	60953474	A3SS	0.33	50	50	ENSMUST00000137833.2	ENSMUSG00000020097.15	Sgpl1	chr10	protein_coding	sphingosine phosphate lyase 1
chr10	61019270;61020687	61020298;61021081	+	61019270	61021081	cassetteExon	0.5	100	100	ENSMUST00000122261.8	ENSMUSG00000020096.22	Tbata	chr10	protein_coding	thymus, brain and testes associated
chr10	61011757	61015024	+	61011757	61015126	A3SS	0.33	50	50	ENSMUST00000122261.8	ENSMUSG00000020096.22	Tbata	chr10	protein_coding	thymus, brain and testes associated
chr10	61011757	61015077	+	61011757	61015126	A3SS	0.33	50	50	ENSMUST00000122261.8	ENSMUSG00000020096.22	Tbata	chr10	protein_coding	thymus, brain and testes associated
chr10	61015284	61016027	+	61015284	61016094	A3SS	0.5	50	50	ENSMUST00000122261.8	ENSMUSG00000020096.22	Tbata	chr10	protein_coding	thymus, brain and testes associated
chr10	61016173	61019082	+	61016173	61019079	A3SS	0.5	50	50	ENSMUST00000122261.8	ENSMUSG00000020096.22	Tbata	chr10	protein_coding	thymus, brain and testes associated
chr10	61011182	61011510	+	61010234	61011510	A5SS	0.5	50	50	ENSMUST00000122261.8	ENSMUSG00000020096.22	Tbata	chr10	protein_coding	thymus, brain and testes associated
chr10	61011757	61015077	+	61011757	61015024	A3SS	0.33	50	50	ENSMUST00000035894.12	ENSMUSG00000020096.22	Tbata	chr10	protein_coding	thymus, brain and testes associated
chr10	61062991	61065426	-	61062991	61065435	A5SS	0.5	50	50	ENSMUST00000092486.11	ENSMUSG00000059901.13	Adamts14	chr10	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14
chr10	61191815	61217729	-	61191815	61219071	A5SS	0.5	50	50	ENSMUST00000020289.10	ENSMUSG00000020092.10	Pald1	chr10	protein_coding	phosphatase domain containing, paladin 1
chr10	61332946	61334515	-	61332946	61333722	5pMXE	0.5	50	50	ENSMUST00000220094.2	ENSMUSG00000112058.2	Gm47593	chr10	lncRNA	predicted gene, 47593
chr10	61498662	61499469	+	61496810	61499469	A5SS	0.5	50	50	ENSMUST00000020286.7	ENSMUSG00000020089.9	Ppa1	chr10	protein_coding	pyrophosphatase (inorganic) 1
chr10	61516192	61520659	+	61516192;61519966	61519840;61520659	ES	0.2	50	50	ENSMUST00000220372.2	ENSMUSG00000020088.11	Sar1a	chr10	protein_coding	secretion associated Ras related GTPase 1A
chr10	61516192;61517927	61517878;61520659	+	61516192;61519966	61519840;61520659	MXE	0.5	100	100	ENSMUST00000220372.2	ENSMUSG00000020088.11	Sar1a	chr10	protein_coding	secretion associated Ras related GTPase 1A
chr10	61516192;61520110	61520013;61520659	+	61516192;61519966	61519840;61520659	MXE	0.5	100	100	ENSMUST00000220372.2	ENSMUSG00000020088.11	Sar1a	chr10	protein_coding	secretion associated Ras related GTPase 1A
chr10	61522257;61525466	61525391;61525553	+	61522257	61525553	cassetteExon	0.5	100	100	ENSMUST00000220372.2	ENSMUSG00000020088.11	Sar1a	chr10	protein_coding	secretion associated Ras related GTPase 1A
chr10	61516676	61520659	+	61519966	61520659	A5SS&ES	0.2	50	50	ENSMUST00000220372.2	ENSMUSG00000020088.11	Sar1a	chr10	protein_coding	secretion associated Ras related GTPase 1A
chr10	61516192;61517927	61517878;61520659	+	61516192	61520659	cassetteExon	0.5	100	100	ENSMUST00000020285.10	ENSMUSG00000020088.11	Sar1a	chr10	protein_coding	secretion associated Ras related GTPase 1A
chr10	61516192;61520110	61519840;61520659	+	61516192	61520659	cassetteExon	0.5	100	100	ENSMUST00000020285.10	ENSMUSG00000020088.11	Sar1a	chr10	protein_coding	secretion associated Ras related GTPase 1A
chr10	61516192;61520110	61520013;61520659	+	61516192	61520659	cassetteExon	0.5	100	100	ENSMUST00000020285.10	ENSMUSG00000020088.11	Sar1a	chr10	protein_coding	secretion associated Ras related GTPase 1A
chr10	61516676	61520659	+	61516192	61520659	A5SS	0.2	50	50	ENSMUST00000020285.10	ENSMUSG00000020088.11	Sar1a	chr10	protein_coding	secretion associated Ras related GTPase 1A
chr10	61516192;61517927	61517878;61520659	+	61516192;61520110	61520013;61520659	MXE	0.5	100	100	ENSMUST00000219506.2	ENSMUSG00000020088.11	Sar1a	chr10	protein_coding	secretion associated Ras related GTPase 1A
chr10	61516676	61520659	+	61520110	61520659	A5SS&ES	0.2	50	50	ENSMUST00000219506.2	ENSMUSG00000020088.11	Sar1a	chr10	protein_coding	secretion associated Ras related GTPase 1A
chr10	61516192;61520110	61519840;61520659	+	61516192;61517927	61517878;61520659	MXE	0.5	100	100	ENSMUST00000218474.2	ENSMUSG00000020088.11	Sar1a	chr10	protein_coding	secretion associated Ras related GTPase 1A
chr10	61516676	61520659	+	61517927	61520659	A5SS&ES	0.2	50	50	ENSMUST00000218474.2	ENSMUSG00000020088.11	Sar1a	chr10	protein_coding	secretion associated Ras related GTPase 1A
chr10	61532521	61535222	+	61532521;61534207	61534077;61535222	ES	0.5	50	50	ENSMUST00000020284.5	ENSMUSG00000020087.6	Tysnd1	chr10	protein_coding	trypsin domain containing 1
chr10	61534207	61537813	+	61534207;61535407	61535222;61537813	ES	0.5	50	50	ENSMUST00000020284.5	ENSMUSG00000020087.6	Tysnd1	chr10	protein_coding	trypsin domain containing 1
chr10	61534207	61535263	+	61534207	61535222	A3SS	0.33	50	50	ENSMUST00000020284.5	ENSMUSG00000020087.6	Tysnd1	chr10	protein_coding	trypsin domain containing 1
chr10	61532521;61535407	61535222;61537813	+	61532521;61534207	61534077;61537813	MXE	0.5	100	100	ENSMUST00000218135.2	ENSMUSG00000020087.6	Tysnd1	chr10	protein_coding	trypsin domain containing 1
chr10	61534207;61535407	61535263;61537813	+	61534207	61537813	cassetteExon	0.5	100	100	ENSMUST00000218135.2	ENSMUSG00000020087.6	Tysnd1	chr10	protein_coding	trypsin domain containing 1
chr10	61532521	61535222	+	61532521	61534077	A3SS&ES	0.5	50	50	ENSMUST00000218280.2	ENSMUSG00000020087.6	Tysnd1	chr10	protein_coding	trypsin domain containing 1
chr10	61571437	61574178	+	61571437;61572537	61572362;61574178	ES	0.5	50	50	ENSMUST00000105455.9	ENSMUSG00000020085.16	Aifm2	chr10	protein_coding	apoptosis-inducing factor, mitochondrion-associated 2
chr10	61572537	61574807	+	61572537	61574178	3pMXE	0.5	50	50	ENSMUST00000105455.9	ENSMUSG00000020085.16	Aifm2	chr10	protein_coding	apoptosis-inducing factor, mitochondrion-associated 2
chr10	61551131	61551658	+	61551131	61561635	A3SS	0.5	50	50	ENSMUST00000105455.9	ENSMUSG00000020085.16	Aifm2	chr10	protein_coding	apoptosis-inducing factor, mitochondrion-associated 2
chr10	61556510	61561635	+	61551131	61561635	A5SS	0.5	50	50	ENSMUST00000105455.9	ENSMUSG00000020085.16	Aifm2	chr10	protein_coding	apoptosis-inducing factor, mitochondrion-associated 2
chr10	61571437	61574178	+	61571437	61572362	A3SS&ES	0.5	50	50	ENSMUST00000067857.11	ENSMUSG00000020085.16	Aifm2	chr10	protein_coding	apoptosis-inducing factor, mitochondrion-associated 2
chr10	61675895	61679347	-	61675895;61678460	61678383;61679347	ES	0.5	50	50	ENSMUST00000239309.2	ENSMUSG00000058806.16	Col13a1	chr10	protein_coding	collagen, type XIII, alpha 1
chr10	61686944	61692117	-	61686944;61689171	61689136;61692117	ES	0.5	50	50	ENSMUST00000145469.8	ENSMUSG00000058806.16	Col13a1	chr10	protein_coding	collagen, type XIII, alpha 1
chr10	61693408;61696263	61696219;61698407	-	61693408	61698407	cassetteExon	0.5	100	100	ENSMUST00000145469.8	ENSMUSG00000058806.16	Col13a1	chr10	protein_coding	collagen, type XIII, alpha 1
chr10	61697892	61698407	-	61693408	61698407	A3SS	0.33	50	50	ENSMUST00000145469.8	ENSMUSG00000058806.16	Col13a1	chr10	protein_coding	collagen, type XIII, alpha 1
chr10	61696263	61698407	-	61696263;61697892	61697794;61698407	ES	0.33	50	50	ENSMUST00000105451.8	ENSMUSG00000058806.16	Col13a1	chr10	protein_coding	collagen, type XIII, alpha 1
chr10	61712091	61720455	-	61712091	61713978	5pMXE	0.5	50	50	ENSMUST00000105451.8	ENSMUSG00000058806.16	Col13a1	chr10	protein_coding	collagen, type XIII, alpha 1
chr10	61723135	61728735	-	61723135;61727043	61726987;61728735	ES	0.5	50	50	ENSMUST00000105453.8	ENSMUSG00000058806.16	Col13a1	chr10	protein_coding	collagen, type XIII, alpha 1
chr10	61723135;61725923	61725858;61726987	-	61723135	61726987	cassetteExon	0.5	100	100	ENSMUST00000105453.8	ENSMUSG00000058806.16	Col13a1	chr10	protein_coding	collagen, type XIII, alpha 1
chr10	61738919;61741059	61741033;61744461	-	61738919	61744461	cassetteExon	0.5	100	100	ENSMUST00000105453.8	ENSMUSG00000058806.16	Col13a1	chr10	protein_coding	collagen, type XIII, alpha 1
chr10	61797137	61813492	-	61797137	61814128	A5SS	0.5	50	50	ENSMUST00000105453.8	ENSMUSG00000058806.16	Col13a1	chr10	protein_coding	collagen, type XIII, alpha 1
chr10	61723135	61725858	-	61723135	61728735	A5SS	0.33	50	50	ENSMUST00000051826.14	ENSMUSG00000058806.16	Col13a1	chr10	protein_coding	collagen, type XIII, alpha 1
chr10	61945791	61946738	-	61945791;61946093	61946015;61946738	ES	0.5	50	50	ENSMUST00000125704.8	ENSMUSG00000020083.14	Fam241b	chr10	protein_coding	family with sequence similarity 241, member B
chr10	61946093	61970268	-	61946093	61946738	5pMXE	0.33	50	50	ENSMUST00000125704.8	ENSMUSG00000020083.14	Fam241b	chr10	protein_coding	family with sequence similarity 241, member B
chr10	61945810	61946015	-	61945791	61946015	A3SS	0.5	50	50	ENSMUST00000125704.8	ENSMUSG00000020083.14	Fam241b	chr10	protein_coding	family with sequence similarity 241, member B
chr10	61945791	61946485	-	61945791	61946015	A5SS&ES	0.33	50	50	ENSMUST00000125704.8	ENSMUSG00000020083.14	Fam241b	chr10	protein_coding	family with sequence similarity 241, member B
chr10	61946093	61946377	-	61946093	61946738	A5SS	0.33	50	50	ENSMUST00000125704.8	ENSMUSG00000020083.14	Fam241b	chr10	protein_coding	family with sequence similarity 241, member B
chr10	61945791	61946738	-	61945791	61946485	5pMXE	0.25	50	50	ENSMUST00000142821.8	ENSMUSG00000020083.14	Fam241b	chr10	protein_coding	family with sequence similarity 241, member B
chr10	61945791	61970268	-	61945791	61946485	5pMXE	0.25	50	50	ENSMUST00000142821.8	ENSMUSG00000020083.14	Fam241b	chr10	protein_coding	family with sequence similarity 241, member B
chr10	61946093	61970268	-	61946093	61946377	5pMXE	0.33	50	50	ENSMUST00000124615.8	ENSMUSG00000020083.14	Fam241b	chr10	protein_coding	family with sequence similarity 241, member B
chr10	61945791	61946738	-	61945791	61946015	A5SS&ES	0.33	50	50	ENSMUST00000124615.8	ENSMUSG00000020083.14	Fam241b	chr10	protein_coding	family with sequence similarity 241, member B
chr10	61945791	61970268	-	61945791	61946738	5pMXE	0.25	50	50	ENSMUST00000142796.8	ENSMUSG00000020083.14	Fam241b	chr10	protein_coding	family with sequence similarity 241, member B
chr10	61970540	61978045	-	61970540	61975441	5pMXE	0.33	50	50	ENSMUST00000027719.12	ENSMUSG00000020083.14	Fam241b	chr10	protein_coding	family with sequence similarity 241, member B
chr10	61970540	61979649	-	61970540	61975441	5pMXE	0.33	50	50	ENSMUST00000027719.12	ENSMUSG00000020083.14	Fam241b	chr10	protein_coding	family with sequence similarity 241, member B
chr10	61944902;61945791	61945663;61970268	-	61944902	61970268	cassetteExon	0.5	100	100	ENSMUST00000027719.12	ENSMUSG00000020083.14	Fam241b	chr10	protein_coding	family with sequence similarity 241, member B
chr10	61944902;61946093	61945663;61970268	-	61944902	61970268	cassetteExon	0.5	100	100	ENSMUST00000027719.12	ENSMUSG00000020083.14	Fam241b	chr10	protein_coding	family with sequence similarity 241, member B
chr10	61945791	61970268	-	61946093	61970268	A3SS&ES	0.33	50	50	ENSMUST00000156798.2	ENSMUSG00000020083.14	Fam241b	chr10	protein_coding	family with sequence similarity 241, member B
chr10	61945791;61946093	61946015;61970268	-	61945791	61970268	cassetteExon	0.5	100	100	ENSMUST00000141724.8	ENSMUSG00000020083.14	Fam241b	chr10	protein_coding	family with sequence similarity 241, member B
chr10	61970540;61978128	61978045;61979649	-	61970540	61979649	cassetteExon	0.5	100	100	ENSMUST00000141724.8	ENSMUSG00000020083.14	Fam241b	chr10	protein_coding	family with sequence similarity 241, member B
chr10	61970540;61978161	61978045;61979649	-	61970540	61979649	cassetteExon	0.5	100	100	ENSMUST00000141724.8	ENSMUSG00000020083.14	Fam241b	chr10	protein_coding	family with sequence similarity 241, member B
chr10	61945791	61970268	-	61945791	61946015	5pMXE	0.25	50	50	ENSMUST00000141144.2	ENSMUSG00000020083.14	Fam241b	chr10	protein_coding	family with sequence similarity 241, member B
chr10	61944902	61970268	-	61945791	61970268	3pMXE	0.33	50	50	ENSMUST00000150057.2	ENSMUSG00000020083.14	Fam241b	chr10	protein_coding	family with sequence similarity 241, member B
chr10	61978128	61979649	-	61978161	61979649	A3SS	0.33	50	50	ENSMUST00000150057.2	ENSMUSG00000020083.14	Fam241b	chr10	protein_coding	family with sequence similarity 241, member B
chr10	61969106	61969355	+	61969106	61969241	A3SS	0.5	50	50	ENSMUST00000050103.2	ENSMUSG00000044312.5	Neurog3	chr10	protein_coding	neurogenin 3
chr10	62025636	62027247	-	62025640	62027247	A3SS	0.5	50	50	ENSMUST00000047883.11	ENSMUSG00000037031.11	Tspan15	chr10	protein_coding	tetraspanin 15
chr10	62029741	62029852	-	62029741	62037557	A5SS	0.5	50	50	ENSMUST00000047883.11	ENSMUSG00000037031.11	Tspan15	chr10	protein_coding	tetraspanin 15
chr10	62151327	62178280	-	62151327	62175792	5pMXE	0.2	50	50	ENSMUST00000099691.11	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62151327	62188837	-	62151327	62175792	5pMXE	0.2	50	50	ENSMUST00000099691.11	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62126172;62127822	62127754;62128093	-	62126172	62128093	cassetteExon	0.5	100	100	ENSMUST00000099691.11	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62151327	62154044	-	62151327	62175792	A5SS	0.2	50	50	ENSMUST00000099691.11	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62151327	62163182	-	62151327	62175792	A5SS	0.2	50	50	ENSMUST00000099691.11	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62194209	62215594	-	62194209;62200847	62200802;62215594	ES	0.33	50	50	ENSMUST00000116238.9	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62194209;62211124	62210728;62215594	-	62194209;62200847	62200802;62215594	MXE	0.5	100	100	ENSMUST00000116238.9	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62200847;62211124	62210728;62215594	-	62200847	62215594	cassetteExon	0.5	100	100	ENSMUST00000116238.9	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62135048	62178280	-	62135048	62140499	A5SS&ES	0.5	50	50	ENSMUST00000116238.9	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62151327	62154044	-	62151327	62188837	A5SS	0.2	50	50	ENSMUST00000116238.9	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62151327	62163182	-	62151327	62188837	A5SS	0.2	50	50	ENSMUST00000116238.9	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62151327	62178280	-	62151327	62188837	A5SS	0.2	50	50	ENSMUST00000116238.9	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62194209	62197929	-	62194209	62200802	A5SS	0.16	50	50	ENSMUST00000116238.9	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62194209	62200667	-	62194209	62200802	A5SS	0.16	50	50	ENSMUST00000116238.9	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62194209	62210483	-	62194209	62200802	A5SS&ES	0.16	50	50	ENSMUST00000116238.9	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62200847	62210483	-	62200847	62215594	A5SS	0.33	50	50	ENSMUST00000116238.9	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62151327	62154044	-	62151327	62178280	A5SS	0.2	50	50	ENSMUST00000130422.8	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62151327	62163182	-	62151327	62178280	A5SS	0.2	50	50	ENSMUST00000130422.8	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62151327	62163182	-	62151327	62154044	5pMXE	0.2	50	50	ENSMUST00000152761.8	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62151327	62178280	-	62135048	62178280	A3SS	0.5	50	50	ENSMUST00000143179.2	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62194209	62215594	-	62194209	62210483	5pMXE	0.16	50	50	ENSMUST00000134877.8	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62194209;62200847	62200667;62210483	-	62194209	62210483	cassetteExon	0.5	100	100	ENSMUST00000134877.8	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62194209;62200847	62200802;62210483	-	62194209	62210483	cassetteExon	0.5	100	100	ENSMUST00000134877.8	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62194209	62197929	-	62194209	62210483	A5SS	0.16	50	50	ENSMUST00000134877.8	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62194209	62210728	-	62194209	62210483	A5SS	0.16	50	50	ENSMUST00000134877.8	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62194209	62197929	-	62194209	62200667	A5SS	0.2	50	50	ENSMUST00000135317.8	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62194209	62210728	-	62194209	62200667	A5SS&ES	0.2	50	50	ENSMUST00000135317.8	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62200847	62210728	-	62200847	62210483	A5SS	0.33	50	50	ENSMUST00000135317.8	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62194209	62210728	-	62194209;62200847	62200802;62210728	ES	0.33	50	50	ENSMUST00000130091.8	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62200847	62215594	-	62200847	62210728	5pMXE	0.33	50	50	ENSMUST00000130091.8	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62194209;62210585	62210483;62210728	-	62194209;62200847	62200802;62210728	MXE	0.5	100	100	ENSMUST00000130091.8	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62200847;62210585	62210483;62210728	-	62200847	62210728	cassetteExon	0.5	100	100	ENSMUST00000130091.8	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62194209	62215594	-	62194209	62210728	5pMXE	0.16	50	50	ENSMUST00000134447.8	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62194209;62200847	62200667;62210728	-	62194209	62210728	cassetteExon	0.5	100	100	ENSMUST00000134447.8	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62194209;62210585	62210483;62210728	-	62194209	62210728	cassetteExon	0.5	100	100	ENSMUST00000134447.8	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62194209	62197929	-	62194209	62210728	A5SS	0.16	50	50	ENSMUST00000134447.8	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62194209;62200847	62200667;62210728	-	62194209;62210585	62210483;62210728	MXE	0.5	100	100	ENSMUST00000136548.8	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62194209;62200847	62200667;62215594	-	62194209	62215594	cassetteExon	0.5	100	100	ENSMUST00000143236.8	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62194209;62211124	62210728;62215594	-	62194209	62215594	cassetteExon	0.5	100	100	ENSMUST00000143236.8	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62194209	62197929	-	62194209	62215594	A5SS	0.16	50	50	ENSMUST00000143236.8	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62194209;62211124	62210728;62215594	-	62194209;62200847	62200667;62215594	MXE	0.5	100	100	ENSMUST00000133429.8	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62194209	62210483	-	62194209	62200667	A5SS&ES	0.16	50	50	ENSMUST00000133429.8	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62200847	62215594	-	62200847;62211124	62210483;62215594	ES	0.33	50	50	ENSMUST00000132926.8	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62194209	62210728	-	62194209	62200802	A5SS&ES	0.16	50	50	ENSMUST00000132926.8	ENSMUSG00000037012.19	Hk1	chr10	protein_coding	hexokinase 1
chr10	62176562	62185266	+	62176191	62185266	A5SS	0.5	50	50	ENSMUST00000123457.2	ENSMUSG00000085347.2	Hk1os	chr10	lncRNA	hexokinase 1, opposite strand
chr10	62176562	62192025	+	62176562	62185266	3pMXE	0.5	50	50	ENSMUST00000143122.2	ENSMUSG00000085347.2	Hk1os	chr10	lncRNA	hexokinase 1, opposite strand
chr10	62265587	62266250	-	62265613	62266250	A3SS	0.5	50	50	ENSMUST00000020273.16	ENSMUSG00000020079.16	Supv3l1	chr10	protein_coding	suppressor of var1, 3-like 1 (S. cerevisiae)
chr10	62268178	62268831	-	62268244	62268831	A3SS	0.5	50	50	ENSMUST00000020273.16	ENSMUSG00000020079.16	Supv3l1	chr10	protein_coding	suppressor of var1, 3-like 1 (S. cerevisiae)
chr10	62277025	62279158	-	62277025	62279174	A5SS	0.5	50	50	ENSMUST00000020273.16	ENSMUSG00000020079.16	Supv3l1	chr10	protein_coding	suppressor of var1, 3-like 1 (S. cerevisiae)
chr10	62300517	62305680	-	62300517;62304233	62304069;62305680	ES	0.5	50	50	ENSMUST00000092473.5	ENSMUSG00000020078.17	Vps26a	chr10	protein_coding	VPS26 retromer complex component A
chr10	62305836	62316337	-	62305836;62306914	62306839;62316337	ES	0.5	50	50	ENSMUST00000092473.5	ENSMUSG00000020078.17	Vps26a	chr10	protein_coding	VPS26 retromer complex component A
chr10	62316486	62322437	-	62316486	62322157	5pMXE	0.5	50	50	ENSMUST00000092473.5	ENSMUSG00000020078.17	Vps26a	chr10	protein_coding	VPS26 retromer complex component A
chr10	62305836;62306914	62306839;62322437	-	62305836;62316486	62316337;62322437	MXE	0.5	100	100	ENSMUST00000219574.2	ENSMUSG00000020078.17	Vps26a	chr10	protein_coding	VPS26 retromer complex component A
chr10	62306914	62322437	-	62306914;62316486	62316337;62322437	ES	0.5	50	50	ENSMUST00000105447.11	ENSMUSG00000020078.17	Vps26a	chr10	protein_coding	VPS26 retromer complex component A
chr10	62300517	62305680	-	62304233	62305680	3pMXE	0.5	50	50	ENSMUST00000217868.2	ENSMUSG00000020078.17	Vps26a	chr10	protein_coding	VPS26 retromer complex component A
chr10	62343615;62353923	62353831;62363118	-	62343615	62363118	cassetteExon	0.5	100	100	ENSMUST00000160987.8	ENSMUSG00000020077.15	Srgn	chr10	protein_coding	serglycin
chr10	62343615	62343692	-	62343615	62363118	A5SS	0.25	50	50	ENSMUST00000160987.8	ENSMUSG00000020077.15	Srgn	chr10	protein_coding	serglycin
chr10	62343615	62348869	-	62343615	62363118	A5SS	0.25	50	50	ENSMUST00000160987.8	ENSMUSG00000020077.15	Srgn	chr10	protein_coding	serglycin
chr10	62343615	62343692	-	62343520	62343692	A3SS	0.5	50	50	ENSMUST00000162161.2	ENSMUSG00000020077.15	Srgn	chr10	protein_coding	serglycin
chr10	62343615;62349059	62348869;62353831	-	62343615	62353831	cassetteExon	0.5	100	100	ENSMUST00000160643.8	ENSMUSG00000020077.15	Srgn	chr10	protein_coding	serglycin
chr10	62343615	62343692	-	62343615	62353831	A5SS	0.25	50	50	ENSMUST00000160643.8	ENSMUSG00000020077.15	Srgn	chr10	protein_coding	serglycin
chr10	62343615	62348869	-	62343615	62343692	5pMXE	0.25	50	50	ENSMUST00000159020.2	ENSMUSG00000020077.15	Srgn	chr10	protein_coding	serglycin
chr10	62375835	62399015	-	62375835;62395662	62395513;62399015	ES	0.5	50	50	ENSMUST00000159704.8	ENSMUSG00000036955.17	Kifbp	chr10	protein_coding	kinesin family binding protein
chr10	62395662	62401816	-	62395662;62399130	62399015;62401816	ES	0.33	50	50	ENSMUST00000159704.8	ENSMUSG00000036955.17	Kifbp	chr10	protein_coding	kinesin family binding protein
chr10	62399287	62401816	-	62399130	62401816	A3SS	0.33	50	50	ENSMUST00000159704.8	ENSMUSG00000036955.17	Kifbp	chr10	protein_coding	kinesin family binding protein
chr10	62401900	62403951	-	62401900	62405238	A5SS	0.5	50	50	ENSMUST00000159704.8	ENSMUSG00000036955.17	Kifbp	chr10	protein_coding	kinesin family binding protein
chr10	62375835;62395662	62395513;62401816	-	62375835;62399130	62399015;62401816	MXE	0.5	100	100	ENSMUST00000162759.6	ENSMUSG00000036955.17	Kifbp	chr10	protein_coding	kinesin family binding protein
chr10	62375835	62399015	-	62395662	62399015	3pMXE	0.5	50	50	ENSMUST00000065887.14	ENSMUSG00000036955.17	Kifbp	chr10	protein_coding	kinesin family binding protein
chr10	62395662;62399287	62399015;62401816	-	62395662	62401816	cassetteExon	0.5	100	100	ENSMUST00000162525.8	ENSMUSG00000036955.17	Kifbp	chr10	protein_coding	kinesin family binding protein
chr10	62395662	62401816	-	62395662	62399015	5pMXE	0.5	50	50	ENSMUST00000162263.2	ENSMUSG00000036955.17	Kifbp	chr10	protein_coding	kinesin family binding protein
chr10	62452295;62455408	62455364;62457168	-	62452295	62457168	cassetteExon	0.5	100	100	ENSMUST00000218304.2	ENSMUSG00000020076.8	Ddx50	chr10	protein_coding	DExD box helicase 50
chr10	62482980;62483422	62483313;62486804	-	62482980	62486804	cassetteExon	0.5	100	100	ENSMUST00000020270.6	ENSMUSG00000020076.8	Ddx50	chr10	protein_coding	DExD box helicase 50
chr10	62483422	62486804	-	62483422	62485398	5pMXE	0.5	50	50	ENSMUST00000218372.2	ENSMUSG00000020076.8	Ddx50	chr10	protein_coding	DExD box helicase 50
chr10	62482980	62486804	-	62482980	62483313	5pMXE	0.5	50	50	ENSMUST00000220370.2	ENSMUSG00000020076.8	Ddx50	chr10	protein_coding	DExD box helicase 50
chr10	62503752;62560211	62560042;62561547	-	62503752	62561547	cassetteExon	0.5	100	100	ENSMUST00000148720.8	ENSMUSG00000036923.13	Stox1	chr10	protein_coding	storkhead box 1
chr10	62495446	62499734	-	62495446	62501905	A5SS	0.5	50	50	ENSMUST00000148720.8	ENSMUSG00000036923.13	Stox1	chr10	protein_coding	storkhead box 1
chr10	62587633	62592262	-	62587633;62589192	62588953;62592262	ES	0.5	50	50	ENSMUST00000020268.7	ENSMUSG00000020074.8	Ccar1	chr10	protein_coding	cell division cycle and apoptosis regulator 1
chr10	62616390	62619013	-	62616413	62619013	A3SS	0.5	50	50	ENSMUST00000020268.7	ENSMUSG00000020074.8	Ccar1	chr10	protein_coding	cell division cycle and apoptosis regulator 1
chr10	62626821	62627909	-	62626821	62627984	A5SS	0.2	50	50	ENSMUST00000020268.7	ENSMUSG00000020074.8	Ccar1	chr10	protein_coding	cell division cycle and apoptosis regulator 1
chr10	62626821	62627921	-	62626821	62627984	A5SS	0.2	50	50	ENSMUST00000020268.7	ENSMUSG00000020074.8	Ccar1	chr10	protein_coding	cell division cycle and apoptosis regulator 1
chr10	62626821	62627989	-	62626821	62627984	A5SS	0.2	50	50	ENSMUST00000020268.7	ENSMUSG00000020074.8	Ccar1	chr10	protein_coding	cell division cycle and apoptosis regulator 1
chr10	62626821	62627995	-	62626821	62627984	A5SS	0.2	50	50	ENSMUST00000020268.7	ENSMUSG00000020074.8	Ccar1	chr10	protein_coding	cell division cycle and apoptosis regulator 1
chr10	62626821	62627909	-	62626821	62627995	A5SS	0.2	50	50	ENSMUST00000219527.2	ENSMUSG00000020074.8	Ccar1	chr10	protein_coding	cell division cycle and apoptosis regulator 1
chr10	62626821	62627921	-	62626821	62627995	A5SS	0.2	50	50	ENSMUST00000219527.2	ENSMUSG00000020074.8	Ccar1	chr10	protein_coding	cell division cycle and apoptosis regulator 1
chr10	62626821	62627989	-	62626821	62627995	A5SS	0.2	50	50	ENSMUST00000219527.2	ENSMUSG00000020074.8	Ccar1	chr10	protein_coding	cell division cycle and apoptosis regulator 1
chr10	62587633	62592262	-	62589192	62592262	3pMXE	0.5	50	50	ENSMUST00000218552.2	ENSMUSG00000020074.8	Ccar1	chr10	protein_coding	cell division cycle and apoptosis regulator 1
chr10	62626821	62627909	-	62626821	62627989	A5SS	0.2	50	50	ENSMUST00000218229.2	ENSMUSG00000020074.8	Ccar1	chr10	protein_coding	cell division cycle and apoptosis regulator 1
chr10	62626821	62627921	-	62626821	62627989	A5SS	0.2	50	50	ENSMUST00000218229.2	ENSMUSG00000020074.8	Ccar1	chr10	protein_coding	cell division cycle and apoptosis regulator 1
chr10	62626821	62627909	-	62626821	62627921	A5SS	0.2	50	50	ENSMUST00000217768.2	ENSMUSG00000020074.8	Ccar1	chr10	protein_coding	cell division cycle and apoptosis regulator 1
chr10	62652252;62654813	62654718;62655252	-	62652252	62655252	cassetteExon	0.5	100	100	ENSMUST00000050826.14	ENSMUSG00000047146.18	Tet1	chr10	protein_coding	tet methylcytosine dioxygenase 1
chr10	62649581	62650215	-	62649603	62650215	A3SS	0.5	50	50	ENSMUST00000050826.14	ENSMUSG00000047146.18	Tet1	chr10	protein_coding	tet methylcytosine dioxygenase 1
chr10	62649191	62649303	-	62649191	62649357	A5SS	0.5	50	50	ENSMUST00000050826.14	ENSMUSG00000047146.18	Tet1	chr10	protein_coding	tet methylcytosine dioxygenase 1
chr10	62700640	62700915	-	62700640	62713931	A5SS	0.5	50	50	ENSMUST00000050826.14	ENSMUSG00000047146.18	Tet1	chr10	protein_coding	tet methylcytosine dioxygenase 1
chr10	62715912	62737814	-	62715912	62734723	5pMXE	0.2	50	50	ENSMUST00000174189.2	ENSMUSG00000047146.18	Tet1	chr10	protein_coding	tet methylcytosine dioxygenase 1
chr10	62715912	62722951	-	62715912	62734723	A5SS	0.2	50	50	ENSMUST00000174189.2	ENSMUSG00000047146.18	Tet1	chr10	protein_coding	tet methylcytosine dioxygenase 1
chr10	62715912	62723192	-	62715912	62734723	A5SS	0.2	50	50	ENSMUST00000174189.2	ENSMUSG00000047146.18	Tet1	chr10	protein_coding	tet methylcytosine dioxygenase 1
chr10	62715912	62728474	-	62715912	62734723	A5SS	0.2	50	50	ENSMUST00000174189.2	ENSMUSG00000047146.18	Tet1	chr10	protein_coding	tet methylcytosine dioxygenase 1
chr10	62715912	62723192	-	62715912	62722951	5pMXE	0.2	50	50	ENSMUST00000218438.2	ENSMUSG00000047146.18	Tet1	chr10	protein_coding	tet methylcytosine dioxygenase 1
chr10	62715912	62728474	-	62715912	62722951	5pMXE	0.2	50	50	ENSMUST00000218438.2	ENSMUSG00000047146.18	Tet1	chr10	protein_coding	tet methylcytosine dioxygenase 1
chr10	62715912	62737814	-	62715912	62722951	5pMXE	0.2	50	50	ENSMUST00000218438.2	ENSMUSG00000047146.18	Tet1	chr10	protein_coding	tet methylcytosine dioxygenase 1
chr10	62715912	62728474	-	62715912	62723192	5pMXE	0.2	50	50	ENSMUST00000228901.2	ENSMUSG00000047146.18	Tet1	chr10	protein_coding	tet methylcytosine dioxygenase 1
chr10	62715912	62737814	-	62715912	62723192	5pMXE	0.2	50	50	ENSMUST00000228901.2	ENSMUSG00000047146.18	Tet1	chr10	protein_coding	tet methylcytosine dioxygenase 1
chr10	62715912	62737814	-	62715912	62728474	5pMXE	0.2	50	50	ENSMUST00000227494.2	ENSMUSG00000047146.18	Tet1	chr10	protein_coding	tet methylcytosine dioxygenase 1
chr10	62768570	62773197	+	62768561	62773197	A5SS	0.5	50	50	ENSMUST00000044977.10	ENSMUSG00000071253.9	Slc25a16	chr10	protein_coding	solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16
chr10	62803521	62805559	+	62803521	62805555	A3SS	0.5	50	50	ENSMUST00000131422.8	ENSMUSG00000036875.16	Dna2	chr10	protein_coding	DNA replication helicase/nuclease 2
chr10	62805840	62807623	+	62805737	62807623	A5SS	0.5	50	50	ENSMUST00000131422.8	ENSMUSG00000036875.16	Dna2	chr10	protein_coding	DNA replication helicase/nuclease 2
chr10	62817267	62818450	+	62816111	62818450	A5SS	0.5	50	50	ENSMUST00000148259.2	ENSMUSG00000020070.19	Rufy2	chr10	protein_coding	RUN and FYVE domain-containing 2
chr10	62825019	62828896	+	62825019;62826860	62826759;62828896	ES	0.5	50	50	ENSMUST00000131718.8	ENSMUSG00000020070.19	Rufy2	chr10	protein_coding	RUN and FYVE domain-containing 2
chr10	62830549	62833660	+	62830549;62831158	62831089;62833660	ES	0.5	50	50	ENSMUST00000131718.8	ENSMUSG00000020070.19	Rufy2	chr10	protein_coding	RUN and FYVE domain-containing 2
chr10	62838059	62840436	+	62838059	62838725	3pMXE	0.5	50	50	ENSMUST00000131718.8	ENSMUSG00000020070.19	Rufy2	chr10	protein_coding	RUN and FYVE domain-containing 2
chr10	62854004	62855172	-	62854004;62854677	62854539;62855172	ES	0.5	50	50	ENSMUST00000020263.14	ENSMUSG00000020069.17	Hnrnph3	chr10	protein_coding	heterogeneous nuclear ribonucleoprotein H3
chr10	62853389	62853865	-	62853389	62853820	A5SS	0.5	50	50	ENSMUST00000020263.14	ENSMUSG00000020069.17	Hnrnph3	chr10	protein_coding	heterogeneous nuclear ribonucleoprotein H3
chr10	62860515	62874868	+	62860244	62874868	A5SS	0.5	50	50	ENSMUST00000124784.8	ENSMUSG00000020072.16	Pbld2	chr10	protein_coding	phenazine biosynthesis-like protein domain containing 2
chr10	62896694	62897337	+	62896694;62897245	62897076;62897337	ES	0.5	50	50	ENSMUST00000219687.2	ENSMUSG00000112129.2	Pbld1	chr10	protein_coding	phenazine biosynthesis-like protein domain containing 1
chr10	62897480	62901563	+	62897480	62899637	3pMXE	0.5	50	50	ENSMUST00000219687.2	ENSMUSG00000112129.2	Pbld1	chr10	protein_coding	phenazine biosynthesis-like protein domain containing 1
chr10	63081904;63085865	63085733;63099805	+	63081904	63099805	cassetteExon	0.5	100	100	ENSMUST00000219230.2	ENSMUSG00000020064.10	Herc4	chr10	protein_coding	hect domain and RLD 4
chr10	63150348	63152479	+	63150348;63151622	63151439;63152479	ES	0.5	50	50	ENSMUST00000020258.10	ENSMUSG00000020064.10	Herc4	chr10	protein_coding	hect domain and RLD 4
chr10	63126455;63127062	63126959;63134899	+	63126455	63134899	cassetteExon	0.5	100	100	ENSMUST00000020258.10	ENSMUSG00000020064.10	Herc4	chr10	protein_coding	hect domain and RLD 4
chr10	63135018;63139647	63139624;63142127	+	63135018	63142127	cassetteExon	0.5	100	100	ENSMUST00000020258.10	ENSMUSG00000020064.10	Herc4	chr10	protein_coding	hect domain and RLD 4
chr10	63114244	63118992	+	63114244	63118960	A3SS	0.5	50	50	ENSMUST00000020258.10	ENSMUSG00000020064.10	Herc4	chr10	protein_coding	hect domain and RLD 4
chr10	63135018	63142127	+	63139647	63142127	5pMXE	0.5	50	50	ENSMUST00000219279.2	ENSMUSG00000020064.10	Herc4	chr10	protein_coding	hect domain and RLD 4
chr10	63156743	63159746	-	63156743;63158079	63157528;63159746	ES	0.5	50	50	ENSMUST00000120239.8	ENSMUSG00000020063.17	Sirt1	chr10	protein_coding	sirtuin 1
chr10	63171656	63174344	-	63171656;63172875	63172759;63174344	ES	0.5	50	50	ENSMUST00000120239.8	ENSMUSG00000020063.17	Sirt1	chr10	protein_coding	sirtuin 1
chr10	63161965;63162563	63162439;63167524	-	63161965	63167524	cassetteExon	0.5	100	100	ENSMUST00000120239.8	ENSMUSG00000020063.17	Sirt1	chr10	protein_coding	sirtuin 1
chr10	63171656	63174344	-	63171656	63172759	5pMXE	0.5	50	50	ENSMUST00000146028.8	ENSMUSG00000020063.17	Sirt1	chr10	protein_coding	sirtuin 1
chr10	63158079	63159746	-	63156743	63159746	A3SS	0.5	50	50	ENSMUST00000177694.8	ENSMUSG00000020063.17	Sirt1	chr10	protein_coding	sirtuin 1
chr10	63156743	63157528	-	63156743	63159746	A5SS	0.5	50	50	ENSMUST00000177694.8	ENSMUSG00000020063.17	Sirt1	chr10	protein_coding	sirtuin 1
chr10	63222554	63231564	+	63218297	63231564	A5SS	0.5	50	50	ENSMUST00000129625.8	ENSMUSG00000036764.13	Dnajc12	chr10	protein_coding	DnaJ heat shock protein family (Hsp40) member C12
chr10	63417842	63418968	+	63417842	63656001	A3SS	0.5	50	50	ENSMUST00000105441.8	ENSMUSG00000060843.12	Ctnna3	chr10	protein_coding	catenin (cadherin associated protein), alpha 3
chr10	63688604	63912640	+	63688604	64086477	A3SS	0.5	50	50	ENSMUST00000105441.8	ENSMUSG00000060843.12	Ctnna3	chr10	protein_coding	catenin (cadherin associated protein), alpha 3
chr10	63293443	63339811	+	63265958	63339811	A5SS	0.5	50	50	ENSMUST00000105441.8	ENSMUSG00000060843.12	Ctnna3	chr10	protein_coding	catenin (cadherin associated protein), alpha 3
chr10	63410506	63417723	+	63402749	63417723	A5SS	0.5	50	50	ENSMUST00000105441.8	ENSMUSG00000060843.12	Ctnna3	chr10	protein_coding	catenin (cadherin associated protein), alpha 3
chr10	63656994	63688401	+	63656264	63688401	A5SS	0.5	50	50	ENSMUST00000105441.8	ENSMUSG00000060843.12	Ctnna3	chr10	protein_coding	catenin (cadherin associated protein), alpha 3
chr10	63766046	63925890	-	63766046	63923627	A5SS&ES	0.5	50	50	ENSMUST00000105439.2	ENSMUSG00000042846.9	Lrrtm3	chr10	protein_coding	leucine rich repeat transmembrane neuronal 3
chr10	63925161	63925890	-	63925161	63925489	A5SS	0.5	50	50	ENSMUST00000105439.2	ENSMUSG00000042846.9	Lrrtm3	chr10	protein_coding	leucine rich repeat transmembrane neuronal 3
chr10	63925161	63925890	-	63766046	63925890	A3SS	0.5	50	50	ENSMUST00000131945.2	ENSMUSG00000042846.9	Lrrtm3	chr10	protein_coding	leucine rich repeat transmembrane neuronal 3
chr10	65719273	65729319	-	65719273	65734491	A5SS	0.5	50	50	ENSMUST00000218955.2	ENSMUSG00000112913.2	Gm30853	chr10	lncRNA	predicted gene, 30853
chr10	65956622	65959816	-	65956622;65958870	65958694;65959816	ES	0.33	50	50	ENSMUST00000190260.7	ENSMUSG00000100000.7	1700023F02Rik	chr10	lncRNA	RIKEN cDNA 1700023F02 gene
chr10	65956622;65957811	65957730;65958694	-	65956622	65958694	cassetteExon	0.5	100	100	ENSMUST00000190260.7	ENSMUSG00000100000.7	1700023F02Rik	chr10	lncRNA	RIKEN cDNA 1700023F02 gene
chr10	65956622;65957811	65957730;65959816	-	65956622;65958870	65958694;65959816	MXE	0.5	100	100	ENSMUST00000190260.7	ENSMUSG00000100000.7	1700023F02Rik	chr10	lncRNA	RIKEN cDNA 1700023F02 gene
chr10	65956622	65957730	-	65956622	66023385	A5SS	0.25	50	50	ENSMUST00000189619.2	ENSMUSG00000100000.7	1700023F02Rik	chr10	lncRNA	RIKEN cDNA 1700023F02 gene
chr10	65956622	65958694	-	65956622	66023385	A5SS	0.25	50	50	ENSMUST00000189619.2	ENSMUSG00000100000.7	1700023F02Rik	chr10	lncRNA	RIKEN cDNA 1700023F02 gene
chr10	65956622	65959816	-	65956622	66023385	A5SS	0.25	50	50	ENSMUST00000189619.2	ENSMUSG00000100000.7	1700023F02Rik	chr10	lncRNA	RIKEN cDNA 1700023F02 gene
chr10	65956622	65959816	-	65956622;65957811	65957730;65959816	ES	0.33	50	50	ENSMUST00000191223.7	ENSMUSG00000100000.7	1700023F02Rik	chr10	lncRNA	RIKEN cDNA 1700023F02 gene
chr10	65957811;65958870	65958694;65959816	-	65957811	65959816	cassetteExon	0.5	100	100	ENSMUST00000191223.7	ENSMUSG00000100000.7	1700023F02Rik	chr10	lncRNA	RIKEN cDNA 1700023F02 gene
chr10	65957811	65959816	-	65957811	65958694	5pMXE	0.5	50	50	ENSMUST00000188279.2	ENSMUSG00000100000.7	1700023F02Rik	chr10	lncRNA	RIKEN cDNA 1700023F02 gene
chr10	66751738	66753455	-	66751738	66754158	A5SS	0.5	50	50	ENSMUST00000181710.3	ENSMUSG00000097134.3	1110002J07Rik	chr10	lncRNA	RIKEN cDNA 1110002J07 gene
chr10	66865893;66872422	66872243;66875790	+	66865893	66875790	cassetteExon	0.5	100	100	ENSMUST00000217788.2	ENSMUSG00000112925.2	Gm31763	chr10	lncRNA	predicted gene, 31763
chr10	66840908	66859176	+	66840908	66859041	A3SS	0.5	50	50	ENSMUST00000217788.2	ENSMUSG00000112925.2	Gm31763	chr10	lncRNA	predicted gene, 31763
chr10	66875909	66876454	+	66875913	66876454	A5SS	0.5	50	50	ENSMUST00000217788.2	ENSMUSG00000112925.2	Gm31763	chr10	lncRNA	predicted gene, 31763
chr10	66849565;66849943	66849867;66850681	-	66849565	66850681	cassetteExon	0.5	100	100	ENSMUST00000020023.9	ENSMUSG00000019873.9	Reep3	chr10	protein_coding	receptor accessory protein 3
chr10	66869892	66870378	-	66857672	66870378	A3SS	0.5	50	50	ENSMUST00000020023.9	ENSMUSG00000019873.9	Reep3	chr10	protein_coding	receptor accessory protein 3
chr10	66963201	66993686	+	66932497	66993686	A5SS	0.5	50	50	ENSMUST00000174062.8	ENSMUSG00000037876.18	Jmjd1c	chr10	protein_coding	jumonji domain containing 1C
chr10	67022090	67025515	+	66993850	67025515	A5SS	0.5	50	50	ENSMUST00000174062.8	ENSMUSG00000037876.18	Jmjd1c	chr10	protein_coding	jumonji domain containing 1C
chr10	67052886	67053817	+	67052886	67053896	A3SS	0.5	50	50	ENSMUST00000174317.8	ENSMUSG00000037876.18	Jmjd1c	chr10	protein_coding	jumonji domain containing 1C
chr10	67085585	67088151	+	67085585	67090231	A3SS	0.5	50	50	ENSMUST00000174408.8	ENSMUSG00000037876.18	Jmjd1c	chr10	protein_coding	jumonji domain containing 1C
chr10	67062695	67065627	+	67062698	67065627	A5SS	0.5	50	50	ENSMUST00000174408.8	ENSMUSG00000037876.18	Jmjd1c	chr10	protein_coding	jumonji domain containing 1C
chr10	67105925;67107225	67107179;67111349	-	67105925	67111349	cassetteExon	0.5	100	100	ENSMUST00000077839.13	ENSMUSG00000075000.12	Nrbf2	chr10	protein_coding	nuclear receptor binding factor 2
chr10	67373809	67374111	+	67371568	67374111	A5SS	0.33	50	50	ENSMUST00000145754.8	ENSMUSG00000037868.16	Egr2	chr10	protein_coding	early growth response 2
chr10	67374010	67374111	+	67371568	67374111	A5SS	0.33	50	50	ENSMUST00000145754.8	ENSMUSG00000037868.16	Egr2	chr10	protein_coding	early growth response 2
chr10	67374733	67375575	+	67374219	67375575	A5SS	0.5	50	50	ENSMUST00000145754.8	ENSMUSG00000037868.16	Egr2	chr10	protein_coding	early growth response 2
chr10	67374010	67374111	+	67374010	67374095	A3SS	0.5	50	50	ENSMUST00000130933.2	ENSMUSG00000037868.16	Egr2	chr10	protein_coding	early growth response 2
chr10	67373809	67374111	+	67374010	67374111	A5SS	0.33	50	50	ENSMUST00000105438.9	ENSMUSG00000037868.16	Egr2	chr10	protein_coding	early growth response 2
chr10	67405255	67407426	-	67405255	67405717	5pMXE	0.5	50	50	ENSMUST00000219752.2	ENSMUSG00000112141.2	4930563J15Rik	chr10	lncRNA	RIKEN cDNA 4930563J15 gene
chr10	67733444	67734765	-	67733444	67745031	A5SS	0.33	50	50	ENSMUST00000064656.8	ENSMUSG00000037855.16	Zfp365	chr10	protein_coding	zinc finger protein 365
chr10	67733444	67737035	-	67733444	67745031	A5SS	0.33	50	50	ENSMUST00000064656.8	ENSMUSG00000037855.16	Zfp365	chr10	protein_coding	zinc finger protein 365
chr10	67733444	67734765	-	67733444	67737035	A5SS	0.33	50	50	ENSMUST00000132870.8	ENSMUSG00000037855.16	Zfp365	chr10	protein_coding	zinc finger protein 365
chr10	67823333	67833395	+	67823342	67833395	A5SS	0.5	50	50	ENSMUST00000118160.8	ENSMUSG00000037846.19	Rtkn2	chr10	protein_coding	rhotekin 2
chr10	67879982	67893716	+	67878434	67893716	A5SS	0.5	50	50	ENSMUST00000068994.14	ENSMUSG00000037846.19	Rtkn2	chr10	protein_coding	rhotekin 2
chr10	67879982	67886516	+	67879982	67893716	A3SS	0.5	50	50	ENSMUST00000147556.8	ENSMUSG00000037846.19	Rtkn2	chr10	protein_coding	rhotekin 2
chr10	67970936;67974611	67974476;68021856	-	67970936	68021856	cassetteExon	0.5	100	100	ENSMUST00000219238.2	ENSMUSG00000019947.11	Arid5b	chr10	protein_coding	AT rich interactive domain 5B (MRF1-like)
chr10	67970936	67972316	-	67970936	68021856	A5SS	0.33	50	50	ENSMUST00000219238.2	ENSMUSG00000019947.11	Arid5b	chr10	protein_coding	AT rich interactive domain 5B (MRF1-like)
chr10	67970936	67972316	-	67970936	67974476	A5SS	0.33	50	50	ENSMUST00000020106.9	ENSMUSG00000019947.11	Arid5b	chr10	protein_coding	AT rich interactive domain 5B (MRF1-like)
chr10	68559920	68576749	+	68559920;68572980	68572929;68576749	ES	0.5	50	50	ENSMUST00000219392.2	ENSMUSG00000060044.9	Tmem26	chr10	protein_coding	transmembrane protein 26
chr10	68576827;68577661	68577580;68584206	+	68576827	68584206	cassetteExon	0.5	100	100	ENSMUST00000219392.2	ENSMUSG00000060044.9	Tmem26	chr10	protein_coding	transmembrane protein 26
chr10	69051182;69055369	69055277;69084601	+	69051182	69084601	cassetteExon	0.5	100	100	ENSMUST00000167286.8	ENSMUSG00000019944.15	Rhobtb1	chr10	protein_coding	Rho-related BTB domain containing 1
chr10	69044442	69051132	+	68991361	69051132	A5SS	0.25	50	50	ENSMUST00000167286.8	ENSMUSG00000019944.15	Rhobtb1	chr10	protein_coding	Rho-related BTB domain containing 1
chr10	69048564	69051132	+	68991361	69051132	A5SS	0.25	50	50	ENSMUST00000167286.8	ENSMUSG00000019944.15	Rhobtb1	chr10	protein_coding	Rho-related BTB domain containing 1
chr10	69049205	69051132	+	68991361	69051132	A5SS	0.25	50	50	ENSMUST00000167286.8	ENSMUSG00000019944.15	Rhobtb1	chr10	protein_coding	Rho-related BTB domain containing 1
chr10	69085558	69105733	+	69085558;69102202	69102017;69105733	ES	0.5	50	50	ENSMUST00000164034.8	ENSMUSG00000019944.15	Rhobtb1	chr10	protein_coding	Rho-related BTB domain containing 1
chr10	69121605	69125350	+	69121605;69124885	69124780;69125350	ES	0.5	50	50	ENSMUST00000164034.8	ENSMUSG00000019944.15	Rhobtb1	chr10	protein_coding	Rho-related BTB domain containing 1
chr10	69085558;69097075	69097017;69102017	+	69085558	69102017	cassetteExon	0.5	100	100	ENSMUST00000164034.8	ENSMUSG00000019944.15	Rhobtb1	chr10	protein_coding	Rho-related BTB domain containing 1
chr10	69121605	69122557	+	69121605	69124780	A3SS	0.33	50	50	ENSMUST00000164034.8	ENSMUSG00000019944.15	Rhobtb1	chr10	protein_coding	Rho-related BTB domain containing 1
chr10	69048564	69051132	+	69044442	69051132	A5SS	0.25	50	50	ENSMUST00000164034.8	ENSMUSG00000019944.15	Rhobtb1	chr10	protein_coding	Rho-related BTB domain containing 1
chr10	69049205	69051132	+	69044442	69051132	A5SS	0.25	50	50	ENSMUST00000164034.8	ENSMUSG00000019944.15	Rhobtb1	chr10	protein_coding	Rho-related BTB domain containing 1
chr10	69101622	69102017	+	69085558	69102017	A5SS	0.33	50	50	ENSMUST00000164034.8	ENSMUSG00000019944.15	Rhobtb1	chr10	protein_coding	Rho-related BTB domain containing 1
chr10	69049205	69051132	+	69048564	69051132	A5SS	0.25	50	50	ENSMUST00000020101.12	ENSMUSG00000019944.15	Rhobtb1	chr10	protein_coding	Rho-related BTB domain containing 1
chr10	69085558	69097017	+	69085558	69105733	A3SS	0.33	50	50	ENSMUST00000167384.8	ENSMUSG00000019944.15	Rhobtb1	chr10	protein_coding	Rho-related BTB domain containing 1
chr10	69085558	69105733	+	69085558	69102017	3pMXE	0.33	50	50	ENSMUST00000163497.8	ENSMUSG00000019944.15	Rhobtb1	chr10	protein_coding	Rho-related BTB domain containing 1
chr10	69101622	69102017	+	69097075	69102017	A5SS	0.33	50	50	ENSMUST00000168117.8	ENSMUSG00000019944.15	Rhobtb1	chr10	protein_coding	Rho-related BTB domain containing 1
chr10	69051182	69084601	+	69055369	69084601	5pMXE	0.5	50	50	ENSMUST00000172261.3	ENSMUSG00000019944.15	Rhobtb1	chr10	protein_coding	Rho-related BTB domain containing 1
chr10	69121605	69122557	+	69121605	69125350	A3SS	0.33	50	50	ENSMUST00000163760.2	ENSMUSG00000019944.15	Rhobtb1	chr10	protein_coding	Rho-related BTB domain containing 1
chr10	69185988;69187512	69187422;69188666	-	69185988	69188666	cassetteExon	0.5	100	100	ENSMUST00000020099.13	ENSMUSG00000019942.14	Cdk1	chr10	protein_coding	cyclin-dependent kinase 1
chr10	69176704	69178370	-	69176708	69178370	A3SS	0.5	50	50	ENSMUST00000020099.13	ENSMUSG00000019942.14	Cdk1	chr10	protein_coding	cyclin-dependent kinase 1
chr10	69185988	69186594	-	69185988	69188666	A5SS	0.33	50	50	ENSMUST00000020099.13	ENSMUSG00000019942.14	Cdk1	chr10	protein_coding	cyclin-dependent kinase 1
chr10	69185988	69186594	-	69185988	69187422	A5SS	0.33	50	50	ENSMUST00000119827.8	ENSMUSG00000019942.14	Cdk1	chr10	protein_coding	cyclin-dependent kinase 1
chr10	69320097	69644246	+	69320097	69437283	3pMXE	0.5	50	50	ENSMUST00000218194.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69236366	69320059	+	69234959	69320059	A5SS	0.5	50	50	ENSMUST00000218194.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69740100	69763525	+	69740100;69740340	69740278;69763525	ES	0.25	50	50	ENSMUST00000218680.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69658223;69658931	69658908;69660148	+	69658223	69660148	cassetteExon	0.5	100	100	ENSMUST00000218680.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69740100;69756321	69756268;69763525	+	69740100;69740340	69740278;69763525	MXE	0.5	100	100	ENSMUST00000218680.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69740340;69756321	69756268;69763525	+	69740340	69763525	cassetteExon	0.5	100	100	ENSMUST00000218680.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69786888;69789302	69789270;69791756	+	69786888	69791756	cassetteExon	0.5	100	100	ENSMUST00000218680.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69816224;69816680	69816654;69817946	+	69816224	69817946	cassetteExon	0.5	100	100	ENSMUST00000218680.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69835328;69838061	69837753;69838341	+	69835328	69838341	cassetteExon	0.5	100	100	ENSMUST00000218680.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69686034	69694050	+	69686034	69703215	A3SS	0.5	50	50	ENSMUST00000218680.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69763648	69765277	+	69763648	69768224	A3SS	0.33	50	50	ENSMUST00000218680.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69763648	69768239	+	69763648	69768224	A3SS	0.33	50	50	ENSMUST00000218680.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69818027	69821913	+	69818027	69830202	A3SS	0.33	50	50	ENSMUST00000218680.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69818027	69821919	+	69818027	69830202	A3SS	0.33	50	50	ENSMUST00000218680.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69840821	69842630	+	69840821	69851398	A3SS	0.2	50	50	ENSMUST00000218680.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69840821	69842633	+	69840821	69851398	A3SS	0.2	50	50	ENSMUST00000218680.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69840821	69844608	+	69840821	69851398	A3SS	0.2	50	50	ENSMUST00000218680.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69840821	69851401	+	69840821	69851398	A3SS	0.2	50	50	ENSMUST00000218680.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69370114	69644246	+	69320097	69644246	A5SS	0.2	50	50	ENSMUST00000218680.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69370114	69786782	+	69768326	69786782	A5SS&ES	0.5	50	50	ENSMUST00000218680.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69542755	69644246	+	69320097	69644246	A5SS	0.2	50	50	ENSMUST00000218680.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69621502	69644246	+	69320097	69644246	A5SS	0.2	50	50	ENSMUST00000218680.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69623434	69644246	+	69320097	69644246	A5SS	0.2	50	50	ENSMUST00000218680.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69762021	69763525	+	69740340	69763525	A5SS	0.25	50	50	ENSMUST00000218680.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69817991	69830202	+	69818027	69830202	A5SS	0.2	50	50	ENSMUST00000218680.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69824462	69830202	+	69818027	69830202	A5SS	0.2	50	50	ENSMUST00000218680.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69828305	69830202	+	69818027	69830202	A5SS	0.2	50	50	ENSMUST00000218680.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69829592	69830202	+	69818027	69830202	A5SS	0.2	50	50	ENSMUST00000218680.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69850076	69851398	+	69840821	69851398	A5SS	0.5	50	50	ENSMUST00000218680.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69370114	69430880	+	69370114	69644246	A3SS	0.5	50	50	ENSMUST00000182194.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69542755	69644246	+	69370114	69644246	A5SS	0.2	50	50	ENSMUST00000182194.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69621502	69644246	+	69370114	69644246	A5SS	0.2	50	50	ENSMUST00000182194.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69623434	69644246	+	69370114	69644246	A5SS	0.2	50	50	ENSMUST00000182194.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69740100	69756268	+	69740100;69740340	69740278;69756268	ES	0.33	50	50	ENSMUST00000182884.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69835328	69838341	+	69835328	69837753	A3SS	0.5	50	50	ENSMUST00000182884.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69750734	69756268	+	69740340	69756268	A5SS	0.33	50	50	ENSMUST00000182884.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69762021	69763525	+	69756321	69763525	A5SS	0.25	50	50	ENSMUST00000182884.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69740100;69756321	69756268;69763525	+	69740100	69763525	cassetteExon	0.5	100	100	ENSMUST00000182155.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69762021	69763525	+	69740100	69763525	A5SS	0.25	50	50	ENSMUST00000182155.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69763648	69768239	+	69763648;69765288	69765277;69768239	ES	0.5	50	50	ENSMUST00000183169.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69840821	69844608	+	69840821;69842683	69842630;69844608	ES	0.5	50	50	ENSMUST00000183169.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69840821	69842633	+	69840821	69842630	A3SS	0.2	50	50	ENSMUST00000183169.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69840821	69851401	+	69840821	69842630	A3SS&ES	0.2	50	50	ENSMUST00000183169.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69824462	69830202	+	69817991	69830202	A5SS	0.2	50	50	ENSMUST00000183169.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69828305	69830202	+	69817991	69830202	A5SS	0.2	50	50	ENSMUST00000183169.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69829592	69830202	+	69817991	69830202	A5SS	0.2	50	50	ENSMUST00000183169.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69840821;69842683	69842633;69844608	+	69840821	69844608	cassetteExon	0.5	100	100	ENSMUST00000183148.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69840821	69851401	+	69840821	69844608	A3SS&ES	0.2	50	50	ENSMUST00000183148.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69370114	69430880	+	69370114	69786782	A3SS	0.33	50	50	ENSMUST00000182439.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69370114	69644246	+	69370114	69786782	A3SS	0.33	50	50	ENSMUST00000182439.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69750734	69756268	+	69740100	69756268	A5SS	0.33	50	50	ENSMUST00000092431.12	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69818027	69830202	+	69818027;69824462	69821913;69830202	ES	0.2	50	50	ENSMUST00000182992.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69818027	69821919	+	69818027	69821913	A3SS	0.33	50	50	ENSMUST00000182992.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69621502	69644246	+	69542755	69644246	A5SS	0.2	50	50	ENSMUST00000182992.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69623434	69644246	+	69542755	69644246	A5SS	0.2	50	50	ENSMUST00000182992.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69828305	69830202	+	69824462	69830202	A5SS	0.2	50	50	ENSMUST00000182992.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69829592	69830202	+	69824462	69830202	A5SS	0.2	50	50	ENSMUST00000182992.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69623434	69644246	+	69621502	69644246	A5SS	0.2	50	50	ENSMUST00000182492.2	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69786888	69791756	+	69786888	69789270	3pMXE	0.5	50	50	ENSMUST00000182239.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69840821	69851401	+	69840821	69842633	A3SS&ES	0.2	50	50	ENSMUST00000182269.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69818027	69830202	+	69818027;69829592	69821919;69830202	ES	0.2	50	50	ENSMUST00000186247.7	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69828305	69830202	+	69829592	69830202	A5SS	0.2	50	50	ENSMUST00000186247.7	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	69828305	69830202	+	69828305;69829592	69829375;69830202	ES	0.5	50	50	ENSMUST00000182665.8	ENSMUSG00000069601.15	Ank3	chr10	protein_coding	ankyrin 3, epithelial
chr10	70023645	70023757	+	70023645	70024908	A3SS	0.5	50	50	ENSMUST00000147545.8	ENSMUSG00000048701.14	Ccdc6	chr10	protein_coding	coiled-coil domain containing 6
chr10	70040589	70051591	+	70040589	70050761	3pMXE	0.25	50	50	ENSMUST00000188568.2	ENSMUSG00000019933.8	Mrln	chr10	protein_coding	myoregulin
chr10	70040589	70052782	+	70040589	70050761	3pMXE	0.25	50	50	ENSMUST00000188568.2	ENSMUSG00000019933.8	Mrln	chr10	protein_coding	myoregulin
chr10	70040589	70046490	+	70040589	70050761	A3SS	0.25	50	50	ENSMUST00000188568.2	ENSMUSG00000019933.8	Mrln	chr10	protein_coding	myoregulin
chr10	70040589;70051627	70051591;70052782	+	70040589	70052782	cassetteExon	0.5	100	100	ENSMUST00000020090.8	ENSMUSG00000019933.8	Mrln	chr10	protein_coding	myoregulin
chr10	70040589	70046490	+	70040589	70052782	A3SS	0.25	50	50	ENSMUST00000020090.8	ENSMUSG00000019933.8	Mrln	chr10	protein_coding	myoregulin
chr10	70040589	70046490	+	70040589	70051591	A3SS	0.25	50	50	ENSMUST00000190199.2	ENSMUSG00000019933.8	Mrln	chr10	protein_coding	myoregulin
chr10	70387620	70388862	+	70387620	70388859	A3SS	0.5	50	50	ENSMUST00000105436.9	ENSMUSG00000043259.16	Fam13c	chr10	protein_coding	family with sequence similarity 13, member C
chr10	70406849	70443317	-	70406849	70434835	5pMXE	0.25	50	50	ENSMUST00000046513.10	ENSMUSG00000037747.10	Phyhipl	chr10	protein_coding	phytanoyl-CoA hydroxylase interacting protein-like
chr10	70406849	70491723	-	70406849	70434835	5pMXE	0.25	50	50	ENSMUST00000046513.10	ENSMUSG00000037747.10	Phyhipl	chr10	protein_coding	phytanoyl-CoA hydroxylase interacting protein-like
chr10	70406849	70428506	-	70406849	70434835	A5SS	0.25	50	50	ENSMUST00000046513.10	ENSMUSG00000037747.10	Phyhipl	chr10	protein_coding	phytanoyl-CoA hydroxylase interacting protein-like
chr10	70406849	70443317	-	70406849	70428506	5pMXE	0.25	50	50	ENSMUST00000162251.8	ENSMUSG00000037747.10	Phyhipl	chr10	protein_coding	phytanoyl-CoA hydroxylase interacting protein-like
chr10	70406849	70491723	-	70406849	70428506	5pMXE	0.25	50	50	ENSMUST00000162251.8	ENSMUSG00000037747.10	Phyhipl	chr10	protein_coding	phytanoyl-CoA hydroxylase interacting protein-like
chr10	70461636	70491723	-	70406849	70491723	A3SS	0.33	50	50	ENSMUST00000162144.2	ENSMUSG00000037747.10	Phyhipl	chr10	protein_coding	phytanoyl-CoA hydroxylase interacting protein-like
chr10	70462222	70491723	-	70406849	70491723	A3SS	0.33	50	50	ENSMUST00000162144.2	ENSMUSG00000037747.10	Phyhipl	chr10	protein_coding	phytanoyl-CoA hydroxylase interacting protein-like
chr10	70406849	70443317	-	70406849	70491723	A5SS	0.25	50	50	ENSMUST00000162144.2	ENSMUSG00000037747.10	Phyhipl	chr10	protein_coding	phytanoyl-CoA hydroxylase interacting protein-like
chr10	70443430	70461565	-	70443430;70445586	70445495;70461565	ES	0.33	50	50	ENSMUST00000162793.8	ENSMUSG00000037747.10	Phyhipl	chr10	protein_coding	phytanoyl-CoA hydroxylase interacting protein-like
chr10	70461636	70491723	-	70461636;70462222	70462087;70491723	ES	0.33	50	50	ENSMUST00000162793.8	ENSMUSG00000037747.10	Phyhipl	chr10	protein_coding	phytanoyl-CoA hydroxylase interacting protein-like
chr10	70443430;70450075	70449962;70461565	-	70443430;70445586	70445495;70461565	MXE	0.5	100	100	ENSMUST00000162793.8	ENSMUSG00000037747.10	Phyhipl	chr10	protein_coding	phytanoyl-CoA hydroxylase interacting protein-like
chr10	70438370	70443317	-	70406849	70443317	A3SS	0.33	50	50	ENSMUST00000162793.8	ENSMUSG00000037747.10	Phyhipl	chr10	protein_coding	phytanoyl-CoA hydroxylase interacting protein-like
chr10	70443167	70443317	-	70406849	70443317	A3SS	0.33	50	50	ENSMUST00000162793.8	ENSMUSG00000037747.10	Phyhipl	chr10	protein_coding	phytanoyl-CoA hydroxylase interacting protein-like
chr10	70461636	70461939	-	70461636	70462087	A5SS	0.33	50	50	ENSMUST00000162793.8	ENSMUSG00000037747.10	Phyhipl	chr10	protein_coding	phytanoyl-CoA hydroxylase interacting protein-like
chr10	70462222	70487673	-	70462222	70491723	A5SS	0.5	50	50	ENSMUST00000162793.8	ENSMUSG00000037747.10	Phyhipl	chr10	protein_coding	phytanoyl-CoA hydroxylase interacting protein-like
chr10	70443430	70461565	-	70443430;70450075	70449962;70461565	ES	0.33	50	50	ENSMUST00000162571.8	ENSMUSG00000037747.10	Phyhipl	chr10	protein_coding	phytanoyl-CoA hydroxylase interacting protein-like
chr10	70443167	70443317	-	70438370	70443317	A3SS	0.33	50	50	ENSMUST00000162571.8	ENSMUSG00000037747.10	Phyhipl	chr10	protein_coding	phytanoyl-CoA hydroxylase interacting protein-like
chr10	70461636;70462222	70461939;70491723	-	70461636	70491723	cassetteExon	0.5	100	100	ENSMUST00000161687.8	ENSMUSG00000037747.10	Phyhipl	chr10	protein_coding	phytanoyl-CoA hydroxylase interacting protein-like
chr10	70461636	70491723	-	70461636	70461939	5pMXE	0.33	50	50	ENSMUST00000160127.2	ENSMUSG00000037747.10	Phyhipl	chr10	protein_coding	phytanoyl-CoA hydroxylase interacting protein-like
chr10	70704642	70707920	+	70704642	70705424	3pMXE	0.5	50	50	ENSMUST00000219192.2	ENSMUSG00000047692.7	4930533K18Rik	chr10	lncRNA	RIKEN cDNA 4930533K18 gene
chr10	70761208;70763624	70763545;70766421	-	70761208	70766421	cassetteExon	0.5	100	100	ENSMUST00000143791.8	ENSMUSG00000014329.15	Bicc1	chr10	protein_coding	BicC family RNA binding protein 1
chr10	70915066	70982647	-	70915066	70995251	A5SS	0.5	50	50	ENSMUST00000143791.8	ENSMUSG00000014329.15	Bicc1	chr10	protein_coding	BicC family RNA binding protein 1
chr10	71013815	71017833	-	71013815;71014717	71014640;71017833	ES	0.33	50	50	ENSMUST00000218381.2	ENSMUSG00000112366.2	C730027H18Rik	chr10	lncRNA	RIKEN cDNA C730027H18 gene
chr10	71013815	71017833	-	71007298	71017833	A3SS	0.33	50	50	ENSMUST00000219843.2	ENSMUSG00000112366.2	C730027H18Rik	chr10	lncRNA	RIKEN cDNA C730027H18 gene
chr10	71014717	71017833	-	71007298	71017833	A3SS	0.33	50	50	ENSMUST00000219843.2	ENSMUSG00000112366.2	C730027H18Rik	chr10	lncRNA	RIKEN cDNA C730027H18 gene
chr10	71007298	71007694	-	71007298	71017833	A5SS	0.5	50	50	ENSMUST00000219843.2	ENSMUSG00000112366.2	C730027H18Rik	chr10	lncRNA	RIKEN cDNA C730027H18 gene
chr10	71037640	71039955	+	71029141	71039955	A5SS	0.5	50	50	ENSMUST00000219835.2	ENSMUSG00000112028.2	1700113B09Rik	chr10	lncRNA	RIKEN cDNA 1700113B09 gene
chr10	71070844	71071113	-	71070844	71071373	A5SS	0.5	50	50	ENSMUST00000092430.11	ENSMUSG00000003923.15	Tfam	chr10	protein_coding	transcription factor A, mitochondrial
chr10	71072861	71073288	-	71072861	71073670	A5SS	0.33	50	50	ENSMUST00000092430.11	ENSMUSG00000003923.15	Tfam	chr10	protein_coding	transcription factor A, mitochondrial
chr10	71072861	71074065	-	71072861	71073670	A5SS	0.33	50	50	ENSMUST00000092430.11	ENSMUSG00000003923.15	Tfam	chr10	protein_coding	transcription factor A, mitochondrial
chr10	71072861	71073288	-	71072861	71074065	A5SS	0.33	50	50	ENSMUST00000105432.10	ENSMUSG00000003923.15	Tfam	chr10	protein_coding	transcription factor A, mitochondrial
chr10	71201935	71208535	+	71201935	71208538	A3SS	0.5	50	50	ENSMUST00000079252.13	ENSMUSG00000060733.14	Ipmk	chr10	protein_coding	inositol polyphosphate multikinase
chr10	71212750	71217035	+	71212616	71217035	A5SS	0.5	50	50	ENSMUST00000079252.13	ENSMUSG00000060733.14	Ipmk	chr10	protein_coding	inositol polyphosphate multikinase
chr10	71245277	71268721	+	71238208	71268721	A5SS	0.5	50	50	ENSMUST00000141984.2	ENSMUSG00000060733.14	Ipmk	chr10	protein_coding	inositol polyphosphate multikinase
chr10	71363228	71401161	+	71363228	71499461	A3SS	0.5	50	50	ENSMUST00000218514.2	ENSMUSG00000112126.2	Gm34544	chr10	lncRNA	predicted gene, 34544
chr10	71504151	71513428	+	71504151	71514556	A3SS	0.5	50	50	ENSMUST00000218514.2	ENSMUSG00000112126.2	Gm34544	chr10	lncRNA	predicted gene, 34544
chr10	72492705	72492890	+	72492705	72492878	A3SS	0.5	50	50	ENSMUST00000020081.11	ENSMUSG00000019923.15	Zwint	chr10	protein_coding	ZW10 interactor
chr10	72493220	72503731	+	72493220	72509798	A3SS	0.33	50	50	ENSMUST00000020081.11	ENSMUSG00000019923.15	Zwint	chr10	protein_coding	ZW10 interactor
chr10	72493220	72504644	+	72493220	72509798	A3SS	0.33	50	50	ENSMUST00000020081.11	ENSMUSG00000019923.15	Zwint	chr10	protein_coding	ZW10 interactor
chr10	72493220	72504644	+	72493220	72503731	A3SS	0.33	50	50	ENSMUST00000105431.8	ENSMUSG00000019923.15	Zwint	chr10	protein_coding	ZW10 interactor
chr10	72853876	72854384	-	72817939	72854384	A3SS	0.5	50	50	ENSMUST00000220010.2	ENSMUSG00000111994.2	A330049N07Rik	chr10	lncRNA	RIKEN cDNA A330049N07 gene
chr10	73782978	73887430	+	73782978;73886939	73886925;73887430	ES	0.5	50	50	ENSMUST00000123398.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74046318	74066042	+	74046318;74058302	74058192;74066042	ES	0.5	50	50	ENSMUST00000123398.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74139038	74479196	+	74139038	74152795	3pMXE	0.5	50	50	ENSMUST00000123398.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74066212	74126799	+	74066212	74126803	A3SS	0.5	50	50	ENSMUST00000123398.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	73658091	73782860	+	73550619	73782860	A5SS	0.33	50	50	ENSMUST00000123398.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	73658095	73782860	+	73550619	73782860	A5SS	0.33	50	50	ENSMUST00000123398.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	73782978	74006281	+	73782978;73887495	73887430;74006281	ES	0.5	50	50	ENSMUST00000064562.14	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74462674	74471462	+	74462674	74466343	3pMXE	0.25	50	50	ENSMUST00000064562.14	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74462674	74478114	+	74462674	74466343	3pMXE	0.25	50	50	ENSMUST00000064562.14	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74153001;74157290	74157270;74160190	+	74153001	74160190	cassetteExon	0.5	100	100	ENSMUST00000064562.14	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74178528;74191822	74191690;74221699	+	74178528	74221699	cassetteExon	0.5	100	100	ENSMUST00000064562.14	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74462674;74464765	74464760;74466343	+	74462674	74466343	cassetteExon	0.5	100	100	ENSMUST00000064562.14	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74162036	74164590	+	74162036	74178335	A3SS	0.5	50	50	ENSMUST00000064562.14	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74340640	74342288	+	74340640	74386289	A3SS	0.5	50	50	ENSMUST00000064562.14	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74460255	74461979	+	74460255	74462477	A3SS	0.33	50	50	ENSMUST00000064562.14	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74460255	74462519	+	74460255	74462477	A3SS&ES	0.33	50	50	ENSMUST00000064562.14	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	73658095	73782860	+	73658091	73782860	A5SS	0.33	50	50	ENSMUST00000064562.14	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74215244	74221699	+	74178528	74221699	A5SS	0.33	50	50	ENSMUST00000064562.14	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74191822	74221699	+	74191822;74215244	74215165;74221699	ES	0.33	50	50	ENSMUST00000193174.6	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74460255	74462519	+	74460255;74461987	74461979;74462519	ES	0.5	50	50	ENSMUST00000193174.6	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74478222	74481353	+	74478222	74479196	3pMXE	0.5	50	50	ENSMUST00000193174.6	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74462674;74464765	74464760;74478114	+	74462674	74478114	cassetteExon	0.5	100	100	ENSMUST00000193174.6	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74460255	74471462	+	74460255	74461979	A3SS&ES	0.25	50	50	ENSMUST00000193174.6	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74462674	74471462	+	74462674	74478114	A3SS	0.25	50	50	ENSMUST00000193174.6	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	73658091	74429992	+	74420060	74429992	A5SS&ES	0.5	50	50	ENSMUST00000193174.6	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74477232	74478114	+	74462674	74478114	A5SS	0.25	50	50	ENSMUST00000193174.6	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74477245	74478114	+	74462674	74478114	A5SS	0.25	50	50	ENSMUST00000193174.6	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74464765	74477175	+	74464765	74466343	3pMXE	0.25	50	50	ENSMUST00000129404.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74464765	74478114	+	74464765	74466343	3pMXE	0.25	50	50	ENSMUST00000129404.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	73782978	73886925	+	73782978	74006281	A3SS	0.25	50	50	ENSMUST00000129404.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74464765	74466373	+	74464765	74466343	A3SS	0.25	50	50	ENSMUST00000129404.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74464765	74478114	+	74464765;74477245	74477175;74478114	ES	0.25	50	50	ENSMUST00000131724.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74462674	74466343	+	74462674	74464760	A3SS&ES	0.25	50	50	ENSMUST00000131724.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74462674	74471462	+	74462674	74464760	A3SS&ES	0.25	50	50	ENSMUST00000131724.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74464765	74466373	+	74464765	74477175	A3SS	0.25	50	50	ENSMUST00000131724.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74473027	74477175	+	74464765	74477175	A5SS	0.5	50	50	ENSMUST00000131724.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74477232	74478114	+	74477245	74478114	A5SS	0.25	50	50	ENSMUST00000131724.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	73658091	74429992	+	73658091	73782860	A3SS&ES	0.5	50	50	ENSMUST00000152655.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74066212	74457031	+	74066212	74126799	A3SS&ES	0.33	50	50	ENSMUST00000152655.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74153001	74317869	+	74153001	74160190	A3SS&ES	0.25	50	50	ENSMUST00000152655.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74221792	74232183	+	74221792	74479196	A3SS	0.5	50	50	ENSMUST00000152655.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74478222	74479196	+	74221792	74479196	A5SS	0.2	50	50	ENSMUST00000152655.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	73658091;74430080	74429992;74457031	+	73658091;74066212	73782860;74457031	MXE	0.5	100	100	ENSMUST00000144302.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	73782978;74153001	74152795;74479196	+	73782978;74478222	73887430;74479196	MXE	0.5	100	100	ENSMUST00000144302.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74066212;74126907	74126799;74479196	+	74066212;74478222	74457031;74479196	MXE	0.5	100	100	ENSMUST00000144302.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74066212;74126907	74126803;74479196	+	74066212;74478222	74457031;74479196	MXE	0.5	100	100	ENSMUST00000144302.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74139038	74479196	+	74478222	74479196	A5SS&ES	0.2	50	50	ENSMUST00000144302.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74464765;74477232	74477175;74478114	+	74464765	74478114	cassetteExon	0.5	100	100	ENSMUST00000151116.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74464765	74466373	+	74464765	74478114	A3SS	0.25	50	50	ENSMUST00000151116.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	73782978;74153001	74152795;74479196	+	73782978;74126907	73887430;74479196	MXE	0.5	100	100	ENSMUST00000155701.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74126907;74139038	74138926;74479196	+	74126907	74479196	cassetteExon	0.5	100	100	ENSMUST00000155701.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74221792	74479196	+	74126907	74479196	A5SS	0.2	50	50	ENSMUST00000155701.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74478222	74479196	+	74126907	74479196	A5SS	0.2	50	50	ENSMUST00000155701.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	73782978;74153001	74152795;74479196	+	73782978;74139038	73887430;74479196	MXE	0.5	100	100	ENSMUST00000152819.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74139038;74153001	74152795;74479196	+	74139038	74479196	cassetteExon	0.5	100	100	ENSMUST00000152819.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74221792	74479196	+	74139038	74479196	A5SS	0.2	50	50	ENSMUST00000152819.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74153001	74157270	+	74153001	74479196	A3SS	0.25	50	50	ENSMUST00000125517.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74153001	74160190	+	74153001	74479196	A3SS	0.25	50	50	ENSMUST00000125517.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74153001	74317869	+	74153001	74479196	A3SS	0.25	50	50	ENSMUST00000125517.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74221792	74479196	+	74153001	74479196	A5SS	0.2	50	50	ENSMUST00000125517.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74478222	74479196	+	74153001	74479196	A5SS	0.2	50	50	ENSMUST00000125517.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	73782978	73886925	+	73782978	74152795	A3SS	0.25	50	50	ENSMUST00000124046.8	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	73782978	73887430	+	73782978	74152795	A3SS	0.25	50	50	ENSMUST00000124046.8	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	73782978	74006281	+	73782978	74152795	A3SS	0.25	50	50	ENSMUST00000124046.8	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74066212	74457031	+	74430080	74457031	A5SS&ES	0.5	50	50	ENSMUST00000124046.8	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74139038	74152795	+	73782978	74152795	A5SS	0.5	50	50	ENSMUST00000124046.8	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74460255;74462674	74462477;74471462	+	74460255	74471462	cassetteExon	0.5	100	100	ENSMUST00000146682.8	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74460255;74462674	74462477;74478114	+	74460255;74477245	74471462;74478114	MXE	0.5	100	100	ENSMUST00000146682.8	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74460255;74462674	74462519;74471462	+	74460255	74471462	cassetteExon	0.5	100	100	ENSMUST00000146682.8	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74460255;74462674	74462519;74478114	+	74460255;74477245	74471462;74478114	MXE	0.5	100	100	ENSMUST00000146682.8	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74464765	74478114	+	74477245	74478114	A5SS&ES	0.25	50	50	ENSMUST00000146682.8	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74468025	74471462	+	74460255	74471462	A5SS	0.25	50	50	ENSMUST00000146682.8	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74469218	74471462	+	74460255	74471462	A5SS	0.25	50	50	ENSMUST00000146682.8	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74126907	74479196	+	74126907	74138926	A3SS&ES	0.5	50	50	ENSMUST00000177107.8	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74153001	74157270	+	74153001	74317869	A3SS	0.33	50	50	ENSMUST00000134009.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74302230	74317869	+	74153001	74317869	A5SS	0.5	50	50	ENSMUST00000134009.9	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74460255	74471462	+	74460255	74462519	A3SS&ES	0.25	50	50	ENSMUST00000193739.6	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74462674;74464765	74464760;74477175	+	74462674;74473027	74471462;74477175	MXE	0.5	100	100	ENSMUST00000195531.6	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74462674;74464765	74464760;74478114	+	74462674;74477245	74471462;74478114	MXE	0.5	100	100	ENSMUST00000195531.6	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74468025	74471462	+	74462674	74471462	A5SS	0.25	50	50	ENSMUST00000195531.6	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74469218	74471462	+	74462674	74471462	A5SS	0.25	50	50	ENSMUST00000195531.6	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	74468025	74471462	+	74469218	74471462	A5SS	0.25	50	50	ENSMUST00000127928.7	ENSMUSG00000052613.17	Pcdh15	chr10	protein_coding	protocadherin 15
chr10	73138728	73162601	-	73082975	73162601	A3SS	0.5	50	50	ENSMUST00000147653.2	ENSMUSG00000085456.3	Gm15398	chr10	lncRNA	predicted gene 15398
chr10	74859391	74860878	-	74797564	74860878	A3SS	0.5	50	50	ENSMUST00000179546.8	ENSMUSG00000009070.15	Rsph14	chr10	protein_coding	radial spoke head homolog 14 (Chlamydomonas)
chr10	74867193	74868356	-	74867193	74868336	A5SS	0.5	50	50	ENSMUST00000179546.8	ENSMUSG00000009070.15	Rsph14	chr10	protein_coding	radial spoke head homolog 14 (Chlamydomonas)
chr10	74867193	74868356	-	74867190	74868356	A3SS	0.5	50	50	ENSMUST00000009214.10	ENSMUSG00000009070.15	Rsph14	chr10	protein_coding	radial spoke head homolog 14 (Chlamydomonas)
chr10	74803214	74826766	+	74803214;74814688	74814623;74826766	ES	0.5	50	50	ENSMUST00000037813.5	ENSMUSG00000040009.7	Gnaz	chr10	protein_coding	guanine nucleotide binding protein, alpha z subunit
chr10	74880368	74884281	+	74880368;74881965	74881864;74884281	ES	0.5	50	50	ENSMUST00000136944.8	ENSMUSG00000020175.16	Rab36	chr10	protein_coding	RAB36, member RAS oncogene family
chr10	74873153	74874190	+	74873153	74874265	A3SS	0.33	50	50	ENSMUST00000136944.8	ENSMUSG00000020175.16	Rab36	chr10	protein_coding	RAB36, member RAS oncogene family
chr10	74873153	74874272	+	74873153	74874265	A3SS	0.33	50	50	ENSMUST00000136944.8	ENSMUSG00000020175.16	Rab36	chr10	protein_coding	RAB36, member RAS oncogene family
chr10	74873153	74874190	+	74873153	74874272	A3SS	0.33	50	50	ENSMUST00000147802.9	ENSMUSG00000020175.16	Rab36	chr10	protein_coding	RAB36, member RAS oncogene family
chr10	74884345	74885684	+	74884345	74885728	A3SS	0.5	50	50	ENSMUST00000147802.9	ENSMUSG00000020175.16	Rab36	chr10	protein_coding	RAB36, member RAS oncogene family
chr10	74873315	74874272	+	74873153	74874272	A5SS	0.5	50	50	ENSMUST00000147802.9	ENSMUSG00000020175.16	Rab36	chr10	protein_coding	RAB36, member RAS oncogene family
chr10	74880368	74884281	+	74880368	74881864	3pMXE	0.5	50	50	ENSMUST00000020391.13	ENSMUSG00000020175.16	Rab36	chr10	protein_coding	RAB36, member RAS oncogene family
chr10	75004070	75007167	+	75004070	75011109	A3SS	0.5	50	50	ENSMUST00000164107.3	ENSMUSG00000009681.11	Bcr	chr10	protein_coding	BCR activator of RhoGEF and GTPase
chr10	75009999	75011109	+	75004070	75011109	A5SS	0.5	50	50	ENSMUST00000164107.3	ENSMUSG00000009681.11	Bcr	chr10	protein_coding	BCR activator of RhoGEF and GTPase
chr10	75048323	75066516	+	75048051	75066516	A5SS	0.33	50	50	ENSMUST00000218766.2	ENSMUSG00000033444.15	Specc1l	chr10	protein_coding	sperm antigen with calponin homology and coiled-coil domains 1-like
chr10	75065702	75066516	+	75048051	75066516	A5SS	0.33	50	50	ENSMUST00000218766.2	ENSMUSG00000033444.15	Specc1l	chr10	protein_coding	sperm antigen with calponin homology and coiled-coil domains 1-like
chr10	75139734	75143071	+	75115795	75143071	A5SS	0.5	50	50	ENSMUST00000218766.2	ENSMUSG00000033444.15	Specc1l	chr10	protein_coding	sperm antigen with calponin homology and coiled-coil domains 1-like
chr10	75048323	75057864	+	75048323	75066516	A3SS	0.5	50	50	ENSMUST00000219387.2	ENSMUSG00000033444.15	Specc1l	chr10	protein_coding	sperm antigen with calponin homology and coiled-coil domains 1-like
chr10	75065702	75066516	+	75048323	75066516	A5SS	0.33	50	50	ENSMUST00000219387.2	ENSMUSG00000033444.15	Specc1l	chr10	protein_coding	sperm antigen with calponin homology and coiled-coil domains 1-like
chr10	75152977	75161619	+	75152981	75161619	A5SS	0.25	50	50	ENSMUST00000105420.3	ENSMUSG00000020178.7	Adora2a	chr10	protein_coding	adenosine A2a receptor
chr10	75159240	75161619	+	75152981	75161619	A5SS	0.25	50	50	ENSMUST00000105420.3	ENSMUSG00000020178.7	Adora2a	chr10	protein_coding	adenosine A2a receptor
chr10	75160870	75161619	+	75152981	75161619	A5SS	0.25	50	50	ENSMUST00000105420.3	ENSMUSG00000020178.7	Adora2a	chr10	protein_coding	adenosine A2a receptor
chr10	75159240	75161619	+	75152977	75161619	A5SS	0.25	50	50	ENSMUST00000219044.2	ENSMUSG00000020178.7	Adora2a	chr10	protein_coding	adenosine A2a receptor
chr10	75160870	75161619	+	75152977	75161619	A5SS	0.25	50	50	ENSMUST00000219044.2	ENSMUSG00000020178.7	Adora2a	chr10	protein_coding	adenosine A2a receptor
chr10	75160870	75161619	+	75159240	75161619	A5SS	0.25	50	50	ENSMUST00000219322.2	ENSMUSG00000020178.7	Adora2a	chr10	protein_coding	adenosine A2a receptor
chr10	75256630	75345866	-	75256630;75345667	75345426;75345866	ES	0.33	50	50	ENSMUST00000145890.8	ENSMUSG00000033416.16	Gucd1	chr10	protein_coding	guanylyl cyclase domain containing 1
chr10	75347990	75353575	-	75347990	75352988	5pMXE	0.33	50	50	ENSMUST00000145890.8	ENSMUSG00000033416.16	Gucd1	chr10	protein_coding	guanylyl cyclase domain containing 1
chr10	75347990	75353694	-	75347990	75352988	5pMXE	0.33	50	50	ENSMUST00000145890.8	ENSMUSG00000033416.16	Gucd1	chr10	protein_coding	guanylyl cyclase domain containing 1
chr10	75254296	75256499	-	75200860	75256499	A3SS	0.5	50	50	ENSMUST00000145890.8	ENSMUSG00000033416.16	Gucd1	chr10	protein_coding	guanylyl cyclase domain containing 1
chr10	75344803	75345426	-	75256630	75345426	A3SS	0.5	50	50	ENSMUST00000145890.8	ENSMUSG00000033416.16	Gucd1	chr10	protein_coding	guanylyl cyclase domain containing 1
chr10	75345538	75345866	-	75345667	75345866	A3SS	0.33	50	50	ENSMUST00000145890.8	ENSMUSG00000033416.16	Gucd1	chr10	protein_coding	guanylyl cyclase domain containing 1
chr10	75347976	75352988	-	75347990	75352988	A3SS	0.5	50	50	ENSMUST00000145890.8	ENSMUSG00000033416.16	Gucd1	chr10	protein_coding	guanylyl cyclase domain containing 1
chr10	75347120	75347737	-	75347120	75347906	A5SS	0.33	50	50	ENSMUST00000145890.8	ENSMUSG00000033416.16	Gucd1	chr10	protein_coding	guanylyl cyclase domain containing 1
chr10	75347120	75347755	-	75347120	75347906	A5SS	0.33	50	50	ENSMUST00000145890.8	ENSMUSG00000033416.16	Gucd1	chr10	protein_coding	guanylyl cyclase domain containing 1
chr10	75256630;75345538	75345426;75345866	-	75256630	75345866	cassetteExon	0.5	100	100	ENSMUST00000153125.8	ENSMUSG00000033416.16	Gucd1	chr10	protein_coding	guanylyl cyclase domain containing 1
chr10	75347990	75353575	-	75347990	75353694	A5SS	0.33	50	50	ENSMUST00000118936.8	ENSMUSG00000033416.16	Gucd1	chr10	protein_coding	guanylyl cyclase domain containing 1
chr10	75256630	75345866	-	75345667	75345866	3pMXE	0.33	50	50	ENSMUST00000147269.8	ENSMUSG00000033416.16	Gucd1	chr10	protein_coding	guanylyl cyclase domain containing 1
chr10	75347120	75347755	-	75347120	75347737	A5SS	0.33	50	50	ENSMUST00000123505.2	ENSMUSG00000033416.16	Gucd1	chr10	protein_coding	guanylyl cyclase domain containing 1
chr10	75242993	75248601	+	75237851	75248601	A5SS	0.33	50	50	ENSMUST00000219052.2	ENSMUSG00000033427.15	Upb1	chr10	protein_coding	ureidopropionase, beta
chr10	75246055	75248601	+	75237851	75248601	A5SS	0.33	50	50	ENSMUST00000219052.2	ENSMUSG00000033427.15	Upb1	chr10	protein_coding	ureidopropionase, beta
chr10	75246055	75248601	+	75242993	75248601	A5SS	0.33	50	50	ENSMUST00000039925.8	ENSMUSG00000033427.15	Upb1	chr10	protein_coding	ureidopropionase, beta
chr10	75368064	75371095	+	75368203	75371095	A5SS	0.5	50	50	ENSMUST00000020397.11	ENSMUSG00000020180.11	Snrpd3	chr10	protein_coding	small nuclear ribonucleoprotein D3
chr10	75409582	75409778	+	75409582	75410066	A3SS	0.33	50	50	ENSMUST00000145079.8	ENSMUSG00000006345.11	Ggt1	chr10	protein_coding	gamma-glutamyltransferase 1
chr10	75409582	75410063	+	75409582	75410066	A3SS	0.33	50	50	ENSMUST00000145079.8	ENSMUSG00000006345.11	Ggt1	chr10	protein_coding	gamma-glutamyltransferase 1
chr10	75400092	75400655	+	75397640	75400655	A5SS	0.5	50	50	ENSMUST00000145079.8	ENSMUSG00000006345.11	Ggt1	chr10	protein_coding	gamma-glutamyltransferase 1
chr10	75402183	75409445	+	75400739	75409445	A5SS	0.16	50	50	ENSMUST00000145079.8	ENSMUSG00000006345.11	Ggt1	chr10	protein_coding	gamma-glutamyltransferase 1
chr10	75404600	75409445	+	75400739	75409445	A5SS	0.16	50	50	ENSMUST00000145079.8	ENSMUSG00000006345.11	Ggt1	chr10	protein_coding	gamma-glutamyltransferase 1
chr10	75404604	75409445	+	75400739	75409445	A5SS	0.16	50	50	ENSMUST00000145079.8	ENSMUSG00000006345.11	Ggt1	chr10	protein_coding	gamma-glutamyltransferase 1
chr10	75404803	75409445	+	75400739	75409445	A5SS	0.16	50	50	ENSMUST00000145079.8	ENSMUSG00000006345.11	Ggt1	chr10	protein_coding	gamma-glutamyltransferase 1
chr10	75407477	75409445	+	75400739	75409445	A5SS	0.16	50	50	ENSMUST00000145079.8	ENSMUSG00000006345.11	Ggt1	chr10	protein_coding	gamma-glutamyltransferase 1
chr10	75409777	75410066	+	75409582	75410066	A5SS	0.5	50	50	ENSMUST00000145079.8	ENSMUSG00000006345.11	Ggt1	chr10	protein_coding	gamma-glutamyltransferase 1
chr10	75409582;75409885	75409778;75410063	+	75409582	75410063	cassetteExon	0.5	100	100	ENSMUST00000152657.8	ENSMUSG00000006345.11	Ggt1	chr10	protein_coding	gamma-glutamyltransferase 1
chr10	75404600	75409445	+	75402183	75409445	A5SS	0.16	50	50	ENSMUST00000129232.8	ENSMUSG00000006345.11	Ggt1	chr10	protein_coding	gamma-glutamyltransferase 1
chr10	75404604	75409445	+	75402183	75409445	A5SS	0.16	50	50	ENSMUST00000129232.8	ENSMUSG00000006345.11	Ggt1	chr10	protein_coding	gamma-glutamyltransferase 1
chr10	75404803	75409445	+	75402183	75409445	A5SS	0.16	50	50	ENSMUST00000129232.8	ENSMUSG00000006345.11	Ggt1	chr10	protein_coding	gamma-glutamyltransferase 1
chr10	75407477	75409445	+	75402183	75409445	A5SS	0.16	50	50	ENSMUST00000129232.8	ENSMUSG00000006345.11	Ggt1	chr10	protein_coding	gamma-glutamyltransferase 1
chr10	75404604	75409445	+	75404600	75409445	A5SS	0.16	50	50	ENSMUST00000145928.8	ENSMUSG00000006345.11	Ggt1	chr10	protein_coding	gamma-glutamyltransferase 1
chr10	75404803	75409445	+	75404600	75409445	A5SS	0.16	50	50	ENSMUST00000145928.8	ENSMUSG00000006345.11	Ggt1	chr10	protein_coding	gamma-glutamyltransferase 1
chr10	75407477	75409445	+	75404600	75409445	A5SS	0.16	50	50	ENSMUST00000145928.8	ENSMUSG00000006345.11	Ggt1	chr10	protein_coding	gamma-glutamyltransferase 1
chr10	75416487	75417158	+	75416487	75417131	A3SS	0.5	50	50	ENSMUST00000134503.8	ENSMUSG00000006345.11	Ggt1	chr10	protein_coding	gamma-glutamyltransferase 1
chr10	75421119	75421497	+	75421119	75421221	A3SS&ES	0.5	50	50	ENSMUST00000134503.8	ENSMUSG00000006345.11	Ggt1	chr10	protein_coding	gamma-glutamyltransferase 1
chr10	75404803	75409445	+	75404604	75409445	A5SS	0.16	50	50	ENSMUST00000134503.8	ENSMUSG00000006345.11	Ggt1	chr10	protein_coding	gamma-glutamyltransferase 1
chr10	75407477	75409445	+	75404604	75409445	A5SS	0.16	50	50	ENSMUST00000134503.8	ENSMUSG00000006345.11	Ggt1	chr10	protein_coding	gamma-glutamyltransferase 1
chr10	75410114	75416338	+	75415217	75416338	A5SS&ES	0.5	50	50	ENSMUST00000134503.8	ENSMUSG00000006345.11	Ggt1	chr10	protein_coding	gamma-glutamyltransferase 1
chr10	75407477	75409445	+	75404803	75409445	A5SS	0.16	50	50	ENSMUST00000125770.8	ENSMUSG00000006345.11	Ggt1	chr10	protein_coding	gamma-glutamyltransferase 1
chr10	75444721	75445679	+	75444721;75445226	75445033;75445679	ES	0.5	50	50	ENSMUST00000219247.2	ENSMUSG00000006344.18	Ggt5	chr10	protein_coding	gamma-glutamyltransferase 5
chr10	75445785	75445953	+	75445785	75445947	A3SS	0.5	50	50	ENSMUST00000219247.2	ENSMUSG00000006344.18	Ggt5	chr10	protein_coding	gamma-glutamyltransferase 5
chr10	75439996	75441090	+	75440634	75441090	A5SS	0.25	50	50	ENSMUST00000219247.2	ENSMUSG00000006344.18	Ggt5	chr10	protein_coding	gamma-glutamyltransferase 5
chr10	75440418	75441090	+	75440634	75441090	A5SS	0.25	50	50	ENSMUST00000219247.2	ENSMUSG00000006344.18	Ggt5	chr10	protein_coding	gamma-glutamyltransferase 5
chr10	75439996	75441090	+	75439996;75440634	75440477;75441090	ES	0.25	50	50	ENSMUST00000072217.9	ENSMUSG00000006344.18	Ggt5	chr10	protein_coding	gamma-glutamyltransferase 5
chr10	75439996;75440418	75440146;75441090	+	75439996;75440634	75440477;75441090	MXE	0.5	100	100	ENSMUST00000072217.9	ENSMUSG00000006344.18	Ggt5	chr10	protein_coding	gamma-glutamyltransferase 5
chr10	75439996;75440418	75440359;75441090	+	75439996;75440634	75440477;75441090	MXE	0.5	100	100	ENSMUST00000072217.9	ENSMUSG00000006344.18	Ggt5	chr10	protein_coding	gamma-glutamyltransferase 5
chr10	75425716	75438454	+	75425716	75441090	A3SS	0.5	50	50	ENSMUST00000189972.2	ENSMUSG00000006344.18	Ggt5	chr10	protein_coding	gamma-glutamyltransferase 5
chr10	75439996	75441090	+	75425716	75441090	A5SS	0.25	50	50	ENSMUST00000189972.2	ENSMUSG00000006344.18	Ggt5	chr10	protein_coding	gamma-glutamyltransferase 5
chr10	75440418	75441090	+	75425716	75441090	A5SS	0.25	50	50	ENSMUST00000189972.2	ENSMUSG00000006344.18	Ggt5	chr10	protein_coding	gamma-glutamyltransferase 5
chr10	75440634	75441090	+	75425716	75441090	A5SS	0.25	50	50	ENSMUST00000189972.2	ENSMUSG00000006344.18	Ggt5	chr10	protein_coding	gamma-glutamyltransferase 5
chr10	75439996	75441090	+	75439996;75440418	75440146;75441090	ES	0.25	50	50	ENSMUST00000218807.2	ENSMUSG00000006344.18	Ggt5	chr10	protein_coding	gamma-glutamyltransferase 5
chr10	75439996	75440359	+	75439996	75440146	A3SS	0.25	50	50	ENSMUST00000218807.2	ENSMUSG00000006344.18	Ggt5	chr10	protein_coding	gamma-glutamyltransferase 5
chr10	75439996	75441090	+	75439996;75440418	75440359;75441090	ES	0.25	50	50	ENSMUST00000189991.2	ENSMUSG00000006344.18	Ggt5	chr10	protein_coding	gamma-glutamyltransferase 5
chr10	75444721	75445679	+	75444721	75445033	3pMXE	0.5	50	50	ENSMUST00000188444.2	ENSMUSG00000006344.18	Ggt5	chr10	protein_coding	gamma-glutamyltransferase 5
chr10	75439996;75440634	75440146;75441090	+	75439996	75441090	cassetteExon	0.5	100	100	ENSMUST00000188444.2	ENSMUSG00000006344.18	Ggt5	chr10	protein_coding	gamma-glutamyltransferase 5
chr10	75439996;75440634	75440359;75441090	+	75439996	75441090	cassetteExon	0.5	100	100	ENSMUST00000188444.2	ENSMUSG00000006344.18	Ggt5	chr10	protein_coding	gamma-glutamyltransferase 5
chr10	75478504	75479708	-	75477434	75479708	A3SS	0.5	50	50	ENSMUST00000077610.6	ENSMUSG00000006342.16	Susd2	chr10	protein_coding	sushi domain containing 2
chr10	75477434	75477959	-	75477434	75479708	A5SS	0.5	50	50	ENSMUST00000077610.6	ENSMUSG00000006342.16	Susd2	chr10	protein_coding	sushi domain containing 2
chr10	75562853;75564969	75564860;75568234	-	75562853	75568234	cassetteExon	0.5	100	100	ENSMUST00000001712.8	ENSMUSG00000020196.11	Cabin1	chr10	protein_coding	calcineurin binding protein 1
chr10	75561219	75561383	-	75561238	75561383	A3SS	0.5	50	50	ENSMUST00000001712.8	ENSMUSG00000020196.11	Cabin1	chr10	protein_coding	calcineurin binding protein 1
chr10	75561515	75562692	-	75561589	75562692	A3SS	0.5	50	50	ENSMUST00000001712.8	ENSMUSG00000020196.11	Cabin1	chr10	protein_coding	calcineurin binding protein 1
chr10	75591265	75599859	-	75591334	75599859	A3SS	0.5	50	50	ENSMUST00000001712.8	ENSMUSG00000020196.11	Cabin1	chr10	protein_coding	calcineurin binding protein 1
chr10	75494631	75503376	-	75494631	75520126	A5SS	0.33	50	50	ENSMUST00000001712.8	ENSMUSG00000020196.11	Cabin1	chr10	protein_coding	calcineurin binding protein 1
chr10	75494631	75503849	-	75494631	75520126	A5SS	0.33	50	50	ENSMUST00000001712.8	ENSMUSG00000020196.11	Cabin1	chr10	protein_coding	calcineurin binding protein 1
chr10	75535929	75549374	-	75535929	75549287	A5SS	0.5	50	50	ENSMUST00000001712.8	ENSMUSG00000020196.11	Cabin1	chr10	protein_coding	calcineurin binding protein 1
chr10	75557373	75561015	-	75557373	75561093	A5SS	0.5	50	50	ENSMUST00000001712.8	ENSMUSG00000020196.11	Cabin1	chr10	protein_coding	calcineurin binding protein 1
chr10	75494631	75503849	-	75494631	75503376	5pMXE	0.33	50	50	ENSMUST00000218814.2	ENSMUSG00000020196.11	Cabin1	chr10	protein_coding	calcineurin binding protein 1
chr10	75608747	75611705	-	75608747	75609050	5pMXE	0.5	50	50	ENSMUST00000001716.8	ENSMUSG00000001666.9	Ddt	chr10	protein_coding	D-dopachrome tautomerase
chr10	75610844	75611705	-	75608747	75611705	A3SS	0.33	50	50	ENSMUST00000173512.2	ENSMUSG00000092360.2	Gm20441	chr10	protein_coding	predicted gene 20441
chr10	75611331	75611705	-	75608747	75611705	A3SS	0.33	50	50	ENSMUST00000173512.2	ENSMUSG00000092360.2	Gm20441	chr10	protein_coding	predicted gene 20441
chr10	75612728	75613034	-	75612728	75613935	A5SS	0.5	50	50	ENSMUST00000173512.2	ENSMUSG00000092360.2	Gm20441	chr10	protein_coding	predicted gene 20441
chr10	75614022	75616466	-	75614022	75616681	A5SS	0.5	50	50	ENSMUST00000173512.2	ENSMUSG00000092360.2	Gm20441	chr10	protein_coding	predicted gene 20441
chr10	75610844;75611331	75611324;75611705	-	75610844	75611705	cassetteExon	0.5	100	100	ENSMUST00000001715.10	ENSMUSG00000001665.12	Gstt3	chr10	protein_coding	glutathione S-transferase, theta 3
chr10	75632964	75633514	-	75632964	75634219	A5SS	0.5	50	50	ENSMUST00000001713.10	ENSMUSG00000001663.11	Gstt1	chr10	protein_coding	glutathione S-transferase, theta 1
chr10	75651060	75653033	-	75651092	75653033	A3SS	0.5	50	50	ENSMUST00000160211.2	ENSMUSG00000009093.8	Gstt4	chr10	protein_coding	glutathione S-transferase, theta 4
chr10	75657177	75658146	-	75657152	75658146	A3SS	0.5	50	50	ENSMUST00000160211.2	ENSMUSG00000009093.8	Gstt4	chr10	protein_coding	glutathione S-transferase, theta 4
chr10	75668428	75668495	-	75668402	75668495	A3SS	0.5	50	50	ENSMUST00000220440.2	ENSMUSG00000033318.8	Gstt2	chr10	protein_coding	glutathione S-transferase, theta 2
chr10	75668666	75669486	-	75668645	75669486	A3SS	0.5	50	50	ENSMUST00000220440.2	ENSMUSG00000033318.8	Gstt2	chr10	protein_coding	glutathione S-transferase, theta 2
chr10	75668402	75670009	-	75669573	75670009	A3SS&ES	0.5	50	50	ENSMUST00000218500.2	ENSMUSG00000033318.8	Gstt2	chr10	protein_coding	glutathione S-transferase, theta 2
chr10	75668402	75670009	-	75668402	75668495	5pMXE	0.5	50	50	ENSMUST00000218034.2	ENSMUSG00000033318.8	Gstt2	chr10	protein_coding	glutathione S-transferase, theta 2
chr10	75729351	75729456	+	75729351	75729453	A3SS	0.5	50	50	ENSMUST00000009236.6	ENSMUSG00000009092.6	Derl3	chr10	protein_coding	Der1-like domain family, member 3
chr10	75729518	75729604	+	75729518	75730873	A3SS	0.5	50	50	ENSMUST00000218506.2	ENSMUSG00000009092.6	Derl3	chr10	protein_coding	Der1-like domain family, member 3
chr10	75730461	75730873	+	75729518	75730873	A5SS	0.5	50	50	ENSMUST00000218506.2	ENSMUSG00000009092.6	Derl3	chr10	protein_coding	Der1-like domain family, member 3
chr10	75733439	75740218	-	75733410	75740218	A3SS	0.5	50	50	ENSMUST00000000925.10	ENSMUSG00000000902.14	Smarcb1	chr10	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
chr10	75747660	75750898	-	75747490	75750898	A3SS	0.5	50	50	ENSMUST00000000925.10	ENSMUSG00000000902.14	Smarcb1	chr10	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
chr10	75751027	75752634	-	75751027	75752607	A5SS	0.5	50	50	ENSMUST00000000925.10	ENSMUSG00000000902.14	Smarcb1	chr10	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
chr10	75752745	75757137	-	75747490	75757137	A3SS	0.5	50	50	ENSMUST00000140388.2	ENSMUSG00000000902.14	Smarcb1	chr10	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
chr10	75747490	75750898	-	75747490	75757137	A5SS	0.5	50	50	ENSMUST00000140388.2	ENSMUSG00000000902.14	Smarcb1	chr10	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
chr10	75759324	75759897	-	75759324	75759762	5pMXE	0.33	50	50	ENSMUST00000132869.2	ENSMUSG00000000901.18	Mmp11	chr10	protein_coding	matrix metallopeptidase 11
chr10	75759324	75759793	-	75759324	75759762	A5SS	0.33	50	50	ENSMUST00000132869.2	ENSMUSG00000000901.18	Mmp11	chr10	protein_coding	matrix metallopeptidase 11
chr10	75764343	75772125	-	75764343	75768168	5pMXE	0.5	50	50	ENSMUST00000120281.8	ENSMUSG00000000901.18	Mmp11	chr10	protein_coding	matrix metallopeptidase 11
chr10	75759324	75759897	-	75759324	75759793	A5SS	0.33	50	50	ENSMUST00000120281.8	ENSMUSG00000000901.18	Mmp11	chr10	protein_coding	matrix metallopeptidase 11
chr10	75775314	75775547	-	75775314	75775554	A5SS	0.5	50	50	ENSMUST00000059658.6	ENSMUSG00000050157.7	Gm867	chr10	protein_coding	predicted gene 867
chr10	75784243	75784977	+	75779124	75784977	A5SS	0.5	50	50	ENSMUST00000121151.2	ENSMUSG00000000903.4	Vpreb3	chr10	protein_coding	pre-B lymphocyte gene 3
chr10	75831764	75833994	+	75831764	75836223	A3SS	0.5	50	50	ENSMUST00000099577.4	ENSMUSG00000033255.9	Gm5134	chr10	protein_coding	predicted gene 5134
chr10	75868583	75874068	+	75868583;75868909	75868787;75874068	ES	0.5	50	50	ENSMUST00000218627.2	ENSMUSG00000049764.9	Zfp280b	chr10	protein_coding	zinc finger protein 280B
chr10	76053323;76053475	76053414;76056832	-	76053323	76056832	cassetteExon	0.5	100	100	ENSMUST00000099571.10	ENSMUSG00000020230.16	Prmt2	chr10	protein_coding	protein arginine N-methyltransferase 2
chr10	76044507	76045172	-	76044417	76045172	A3SS	0.5	50	50	ENSMUST00000099571.10	ENSMUSG00000020230.16	Prmt2	chr10	protein_coding	protein arginine N-methyltransferase 2
chr10	76061299	76062024	-	76061304	76062024	A3SS	0.5	50	50	ENSMUST00000099571.10	ENSMUSG00000020230.16	Prmt2	chr10	protein_coding	protein arginine N-methyltransferase 2
chr10	76072655	76073584	-	76072658	76073584	A3SS	0.5	50	50	ENSMUST00000099571.10	ENSMUSG00000020230.16	Prmt2	chr10	protein_coding	protein arginine N-methyltransferase 2
chr10	76046361	76046886	-	76046361	76053148	A5SS	0.5	50	50	ENSMUST00000099571.10	ENSMUSG00000020230.16	Prmt2	chr10	protein_coding	protein arginine N-methyltransferase 2
chr10	76106291;76107239	76107210;76108367	-	76106291	76108367	cassetteExon	0.5	100	100	ENSMUST00000160048.8	ENSMUSG00000020231.16	Dip2a	chr10	protein_coding	disco interacting protein 2 homolog A
chr10	76155420;76157440	76157324;76163536	-	76155420	76163536	cassetteExon	0.5	100	100	ENSMUST00000160048.8	ENSMUSG00000020231.16	Dip2a	chr10	protein_coding	disco interacting protein 2 homolog A
chr10	76115650	76115691	-	76115620	76115691	A3SS	0.5	50	50	ENSMUST00000160048.8	ENSMUSG00000020231.16	Dip2a	chr10	protein_coding	disco interacting protein 2 homolog A
chr10	76122322	76123147	-	76122276	76123147	A3SS	0.5	50	50	ENSMUST00000160048.8	ENSMUSG00000020231.16	Dip2a	chr10	protein_coding	disco interacting protein 2 homolog A
chr10	76248483	76254194	-	76248483	76252524	5pMXE	0.33	50	50	ENSMUST00000220395.2	ENSMUSG00000001151.11	Pcnt	chr10	protein_coding	pericentrin (kendrin)
chr10	76192070	76192869	-	76192230	76192869	A3SS	0.5	50	50	ENSMUST00000220395.2	ENSMUSG00000001151.11	Pcnt	chr10	protein_coding	pericentrin (kendrin)
chr10	76215889	76215997	-	76215889	76216051	A5SS	0.5	50	50	ENSMUST00000220395.2	ENSMUSG00000001151.11	Pcnt	chr10	protein_coding	pericentrin (kendrin)
chr10	76248483	76249577	-	76248483	76252524	A5SS	0.33	50	50	ENSMUST00000220395.2	ENSMUSG00000001151.11	Pcnt	chr10	protein_coding	pericentrin (kendrin)
chr10	76248483	76249577	-	76248483	76254194	A5SS	0.33	50	50	ENSMUST00000217838.2	ENSMUSG00000001151.11	Pcnt	chr10	protein_coding	pericentrin (kendrin)
chr10	76286210	76286467	+	76285155	76286467	A5SS	0.5	50	50	ENSMUST00000092406.12	ENSMUSG00000009114.18	2610028H24Rik	chr10	protein_coding	RIKEN cDNA 2610028H24 gene
chr10	76318655	76320488	+	76318655;76319217	76318949;76320488	ES	0.5	50	50	ENSMUST00000170795.3	ENSMUSG00000001150.8	Mcm3ap	chr10	protein_coding	minichromosome maintenance complex component 3 associated protein
chr10	76344261	76348252	+	76344261;76347057	76346854;76348252	ES	0.5	50	50	ENSMUST00000170795.3	ENSMUSG00000001150.8	Mcm3ap	chr10	protein_coding	minichromosome maintenance complex component 3 associated protein
chr10	76317345	76318458	+	76316974	76318458	A5SS	0.5	50	50	ENSMUST00000170795.3	ENSMUSG00000001150.8	Mcm3ap	chr10	protein_coding	minichromosome maintenance complex component 3 associated protein
chr10	76318655	76320488	+	76318655	76318949	3pMXE	0.5	50	50	ENSMUST00000220410.2	ENSMUSG00000001150.8	Mcm3ap	chr10	protein_coding	minichromosome maintenance complex component 3 associated protein
chr10	76344261	76348252	+	76347057	76348252	5pMXE	0.5	50	50	ENSMUST00000218904.2	ENSMUSG00000001150.8	Mcm3ap	chr10	protein_coding	minichromosome maintenance complex component 3 associated protein
chr10	76367508	76367684	+	76367455	76367684	A5SS	0.5	50	50	ENSMUST00000159013.8	ENSMUSG00000033105.13	Lss	chr10	protein_coding	lanosterol synthase
chr10	76372199;76373497	76373403;76374186	+	76372199	76374186	cassetteExon	0.5	100	100	ENSMUST00000162475.8	ENSMUSG00000033105.13	Lss	chr10	protein_coding	lanosterol synthase
chr10	76399965	76405170	+	76400029	76405170	A5SS	0.5	50	50	ENSMUST00000009259.5	ENSMUSG00000009115.6	Spatc1l	chr10	protein_coding	spermatogenesis and centriole associated 1 like
chr10	76413964	76415824	+	76413964;76415705	76415617;76415824	ES	0.5	50	50	ENSMUST00000001183.8	ENSMUSG00000001155.14	Ftcd	chr10	protein_coding	formiminotransferase cyclodeaminase
chr10	76423999	76424218	+	76423999	76425060	A3SS	0.5	50	50	ENSMUST00000001183.8	ENSMUSG00000001155.14	Ftcd	chr10	protein_coding	formiminotransferase cyclodeaminase
chr10	76435727	76439163	-	76432645	76439163	A3SS	0.5	50	50	ENSMUST00000001181.13	ENSMUSG00000020241.14	Col6a2	chr10	protein_coding	collagen, type VI, alpha 2
chr10	76603750	76606795	-	76603750;76606153	76606094;76606795	ES	0.5	50	50	ENSMUST00000001148.11	ENSMUSG00000001120.16	Pcbp3	chr10	protein_coding	poly(rC) binding protein 3
chr10	76606153	76617666	-	76606153;76606873	76606795;76617666	ES	0.25	50	50	ENSMUST00000001148.11	ENSMUSG00000001120.16	Pcbp3	chr10	protein_coding	poly(rC) binding protein 3
chr10	76606870	76617666	-	76606873	76617666	A3SS	0.25	50	50	ENSMUST00000001148.11	ENSMUSG00000001120.16	Pcbp3	chr10	protein_coding	poly(rC) binding protein 3
chr10	76686182	76728391	-	76661826	76728391	A3SS	0.5	50	50	ENSMUST00000001148.11	ENSMUSG00000001120.16	Pcbp3	chr10	protein_coding	poly(rC) binding protein 3
chr10	76617707	76620905	-	76617707	76620974	A5SS	0.5	50	50	ENSMUST00000001148.11	ENSMUSG00000001120.16	Pcbp3	chr10	protein_coding	poly(rC) binding protein 3
chr10	76636748	76652444	-	76636748	76661694	A5SS	0.25	50	50	ENSMUST00000001148.11	ENSMUSG00000001120.16	Pcbp3	chr10	protein_coding	poly(rC) binding protein 3
chr10	76636748	76655181	-	76636748	76661694	A5SS	0.25	50	50	ENSMUST00000001148.11	ENSMUSG00000001120.16	Pcbp3	chr10	protein_coding	poly(rC) binding protein 3
chr10	76636748	76658564	-	76636748	76661694	A5SS	0.25	50	50	ENSMUST00000001148.11	ENSMUSG00000001120.16	Pcbp3	chr10	protein_coding	poly(rC) binding protein 3
chr10	76661826	76683570	-	76661826	76728391	A5SS	0.5	50	50	ENSMUST00000001148.11	ENSMUSG00000001120.16	Pcbp3	chr10	protein_coding	poly(rC) binding protein 3
chr10	76728490	76741609	-	76728490	76797582	A5SS	0.5	50	50	ENSMUST00000001148.11	ENSMUSG00000001120.16	Pcbp3	chr10	protein_coding	poly(rC) binding protein 3
chr10	76603750;76606153	76606094;76617666	-	76603750	76617666	cassetteExon	0.5	100	100	ENSMUST00000168505.8	ENSMUSG00000001120.16	Pcbp3	chr10	protein_coding	poly(rC) binding protein 3
chr10	76603750;76606870	76606795;76617666	-	76603750	76617666	cassetteExon	0.5	100	100	ENSMUST00000168505.8	ENSMUSG00000001120.16	Pcbp3	chr10	protein_coding	poly(rC) binding protein 3
chr10	76603750;76606873	76606795;76617666	-	76603750	76617666	cassetteExon	0.5	100	100	ENSMUST00000168505.8	ENSMUSG00000001120.16	Pcbp3	chr10	protein_coding	poly(rC) binding protein 3
chr10	76636748	76652444	-	76636748	76658564	A5SS	0.25	50	50	ENSMUST00000168505.8	ENSMUSG00000001120.16	Pcbp3	chr10	protein_coding	poly(rC) binding protein 3
chr10	76636748	76655181	-	76636748	76658564	A5SS	0.25	50	50	ENSMUST00000168505.8	ENSMUSG00000001120.16	Pcbp3	chr10	protein_coding	poly(rC) binding protein 3
chr10	76606153	76617666	-	76606153;76606870	76606795;76617666	ES	0.25	50	50	ENSMUST00000105411.9	ENSMUSG00000001120.16	Pcbp3	chr10	protein_coding	poly(rC) binding protein 3
chr10	76603750;76606870	76606795;76617666	-	76603750;76606153	76606094;76617666	MXE	0.5	100	100	ENSMUST00000168240.2	ENSMUSG00000001120.16	Pcbp3	chr10	protein_coding	poly(rC) binding protein 3
chr10	76603750;76606873	76606795;76617666	-	76603750;76606153	76606094;76617666	MXE	0.5	100	100	ENSMUST00000168240.2	ENSMUSG00000001120.16	Pcbp3	chr10	protein_coding	poly(rC) binding protein 3
chr10	76636748	76655181	-	76636748	76652444	5pMXE	0.25	50	50	ENSMUST00000092393.6	ENSMUSG00000001120.16	Pcbp3	chr10	protein_coding	poly(rC) binding protein 3
chr10	76874413	76878732	+	76874413	76877650	3pMXE	0.5	50	50	ENSMUST00000136150.8	ENSMUSG00000001436.16	Slc19a1	chr10	protein_coding	solute carrier family 19 (folate transporter), member 1
chr10	76868233	76874184	+	76868124	76874184	A5SS	0.16	50	50	ENSMUST00000136150.8	ENSMUSG00000001436.16	Slc19a1	chr10	protein_coding	solute carrier family 19 (folate transporter), member 1
chr10	76868614	76874184	+	76868124	76874184	A5SS	0.16	50	50	ENSMUST00000136150.8	ENSMUSG00000001436.16	Slc19a1	chr10	protein_coding	solute carrier family 19 (folate transporter), member 1
chr10	76869181	76874184	+	76868124	76874184	A5SS	0.16	50	50	ENSMUST00000136150.8	ENSMUSG00000001436.16	Slc19a1	chr10	protein_coding	solute carrier family 19 (folate transporter), member 1
chr10	76869279	76874184	+	76868124	76874184	A5SS	0.16	50	50	ENSMUST00000136150.8	ENSMUSG00000001436.16	Slc19a1	chr10	protein_coding	solute carrier family 19 (folate transporter), member 1
chr10	76869284	76874184	+	76868124	76874184	A5SS	0.16	50	50	ENSMUST00000136150.8	ENSMUSG00000001436.16	Slc19a1	chr10	protein_coding	solute carrier family 19 (folate transporter), member 1
chr10	76868614	76874184	+	76868233	76874184	A5SS	0.16	50	50	ENSMUST00000133059.8	ENSMUSG00000001436.16	Slc19a1	chr10	protein_coding	solute carrier family 19 (folate transporter), member 1
chr10	76869181	76874184	+	76868233	76874184	A5SS	0.16	50	50	ENSMUST00000133059.8	ENSMUSG00000001436.16	Slc19a1	chr10	protein_coding	solute carrier family 19 (folate transporter), member 1
chr10	76869279	76874184	+	76868233	76874184	A5SS	0.16	50	50	ENSMUST00000133059.8	ENSMUSG00000001436.16	Slc19a1	chr10	protein_coding	solute carrier family 19 (folate transporter), member 1
chr10	76869284	76874184	+	76868233	76874184	A5SS	0.16	50	50	ENSMUST00000133059.8	ENSMUSG00000001436.16	Slc19a1	chr10	protein_coding	solute carrier family 19 (folate transporter), member 1
chr10	76880736	76896478	+	76880736	76885374	3pMXE	0.5	50	50	ENSMUST00000144234.8	ENSMUSG00000001436.16	Slc19a1	chr10	protein_coding	solute carrier family 19 (folate transporter), member 1
chr10	76869181	76874184	+	76868614	76874184	A5SS	0.16	50	50	ENSMUST00000144234.8	ENSMUSG00000001436.16	Slc19a1	chr10	protein_coding	solute carrier family 19 (folate transporter), member 1
chr10	76869279	76874184	+	76868614	76874184	A5SS	0.16	50	50	ENSMUST00000144234.8	ENSMUSG00000001436.16	Slc19a1	chr10	protein_coding	solute carrier family 19 (folate transporter), member 1
chr10	76869284	76874184	+	76868614	76874184	A5SS	0.16	50	50	ENSMUST00000144234.8	ENSMUSG00000001436.16	Slc19a1	chr10	protein_coding	solute carrier family 19 (folate transporter), member 1
chr10	76869279	76874184	+	76869181	76874184	A5SS	0.16	50	50	ENSMUST00000105410.10	ENSMUSG00000001436.16	Slc19a1	chr10	protein_coding	solute carrier family 19 (folate transporter), member 1
chr10	76869284	76874184	+	76869181	76874184	A5SS	0.16	50	50	ENSMUST00000105410.10	ENSMUSG00000001436.16	Slc19a1	chr10	protein_coding	solute carrier family 19 (folate transporter), member 1
chr10	76869284	76874184	+	76869279	76874184	A5SS	0.16	50	50	ENSMUST00000136925.8	ENSMUSG00000001436.16	Slc19a1	chr10	protein_coding	solute carrier family 19 (folate transporter), member 1
chr10	76891661	76894533	-	76891661;76893235	76893203;76894533	ES	0.5	50	50	ENSMUST00000081654.13	ENSMUSG00000001435.16	Col18a1	chr10	protein_coding	collagen, type XVIII, alpha 1
chr10	76924790	76925034	-	76924790	76931825	A5SS	0.5	50	50	ENSMUST00000081654.13	ENSMUSG00000001435.16	Col18a1	chr10	protein_coding	collagen, type XVIII, alpha 1
chr10	76932369	76948052	-	76932369	77002124	A5SS	0.33	50	50	ENSMUST00000081654.13	ENSMUSG00000001435.16	Col18a1	chr10	protein_coding	collagen, type XVIII, alpha 1
chr10	76932369	76948793	-	76932369	77002124	A5SS	0.33	50	50	ENSMUST00000081654.13	ENSMUSG00000001435.16	Col18a1	chr10	protein_coding	collagen, type XVIII, alpha 1
chr10	76932369	76948052	-	76932369	76948793	A5SS	0.33	50	50	ENSMUST00000105409.8	ENSMUSG00000001435.16	Col18a1	chr10	protein_coding	collagen, type XVIII, alpha 1
chr10	77100856	77102747	+	77100856;77101795	77101670;77102747	ES	0.33	50	50	ENSMUST00000020493.9	ENSMUSG00000020260.10	Pofut2	chr10	protein_coding	protein O-fucosyltransferase 2
chr10	77101866	77102747	+	77101795	77102747	A5SS	0.33	50	50	ENSMUST00000020493.9	ENSMUSG00000020260.10	Pofut2	chr10	protein_coding	protein O-fucosyltransferase 2
chr10	77100856	77102747	+	77100856	77101670	A3SS	0.5	50	50	ENSMUST00000217993.2	ENSMUSG00000020260.10	Pofut2	chr10	protein_coding	protein O-fucosyltransferase 2
chr10	77100856	77102747	+	77100856;77101866	77101670;77102747	ES	0.33	50	50	ENSMUST00000218064.2	ENSMUSG00000020260.10	Pofut2	chr10	protein_coding	protein O-fucosyltransferase 2
chr10	77100856	77102747	+	77101866	77102747	5pMXE	0.33	50	50	ENSMUST00000218672.2	ENSMUSG00000020260.10	Pofut2	chr10	protein_coding	protein O-fucosyltransferase 2
chr10	77158417;77161525	77161453;77161700	-	77158417	77161700	cassetteExon	0.5	100	100	ENSMUST00000020496.14	ENSMUSG00000020262.16	Adarb1	chr10	protein_coding	adenosine deaminase, RNA-specific, B1
chr10	77195569;77223172	77223093;77253929	-	77195569	77253929	cassetteExon	0.5	100	100	ENSMUST00000020496.14	ENSMUSG00000020262.16	Adarb1	chr10	protein_coding	adenosine deaminase, RNA-specific, B1
chr10	77158464	77161700	-	77158417	77161700	A3SS	0.33	50	50	ENSMUST00000020496.14	ENSMUSG00000020262.16	Adarb1	chr10	protein_coding	adenosine deaminase, RNA-specific, B1
chr10	77147108	77148182	-	77147108	77148212	A5SS	0.5	50	50	ENSMUST00000020496.14	ENSMUSG00000020262.16	Adarb1	chr10	protein_coding	adenosine deaminase, RNA-specific, B1
chr10	77161774	77175854	-	77161774	77195401	A5SS	0.5	50	50	ENSMUST00000020496.14	ENSMUSG00000020262.16	Adarb1	chr10	protein_coding	adenosine deaminase, RNA-specific, B1
chr10	77195569	77197637	-	77195569	77253929	A5SS	0.25	50	50	ENSMUST00000020496.14	ENSMUSG00000020262.16	Adarb1	chr10	protein_coding	adenosine deaminase, RNA-specific, B1
chr10	77195569	77253617	-	77195569	77253929	A5SS	0.25	50	50	ENSMUST00000020496.14	ENSMUSG00000020262.16	Adarb1	chr10	protein_coding	adenosine deaminase, RNA-specific, B1
chr10	77161525	77161700	-	77158464	77161700	A3SS	0.33	50	50	ENSMUST00000105404.9	ENSMUSG00000020262.16	Adarb1	chr10	protein_coding	adenosine deaminase, RNA-specific, B1
chr10	77195569	77197637	-	77195569	77223093	A5SS	0.25	50	50	ENSMUST00000105406.8	ENSMUSG00000020262.16	Adarb1	chr10	protein_coding	adenosine deaminase, RNA-specific, B1
chr10	77195569	77253617	-	77195569	77223093	A5SS&ES	0.25	50	50	ENSMUST00000105406.8	ENSMUSG00000020262.16	Adarb1	chr10	protein_coding	adenosine deaminase, RNA-specific, B1
chr10	77158417	77161700	-	77161525	77161700	3pMXE	0.33	50	50	ENSMUST00000150227.8	ENSMUSG00000020262.16	Adarb1	chr10	protein_coding	adenosine deaminase, RNA-specific, B1
chr10	77195569	77197637	-	77195569	77253617	A5SS	0.25	50	50	ENSMUST00000150512.8	ENSMUSG00000020262.16	Adarb1	chr10	protein_coding	adenosine deaminase, RNA-specific, B1
chr10	77339748	77342946	-	77339748	77350140	A5SS	0.5	50	50	ENSMUST00000045454.9	ENSMUSG00000032977.10	Fam207a	chr10	protein_coding	family with sequence similarity 207, member A
chr10	77350248	77351326	-	77350248	77351437	A5SS	0.5	50	50	ENSMUST00000045454.9	ENSMUSG00000032977.10	Fam207a	chr10	protein_coding	family with sequence similarity 207, member A
chr10	77377860	77381847	+	77377860;77378320	77378232;77381847	ES	0.25	50	50	ENSMUST00000000299.14	ENSMUSG00000000290.14	Itgb2	chr10	protein_coding	integrin beta 2
chr10	77393973	77395984	+	77393973;77395557	77395313;77395984	ES	0.33	50	50	ENSMUST00000000299.14	ENSMUSG00000000290.14	Itgb2	chr10	protein_coding	integrin beta 2
chr10	77378380	77381847	+	77378320	77381847	A5SS	0.25	50	50	ENSMUST00000000299.14	ENSMUSG00000000290.14	Itgb2	chr10	protein_coding	integrin beta 2
chr10	77366293;77377860	77377800;77381847	+	77366293	77381847	cassetteExon	0.5	100	100	ENSMUST00000131023.8	ENSMUSG00000000290.14	Itgb2	chr10	protein_coding	integrin beta 2
chr10	77378320	77381847	+	77366293	77381847	A5SS	0.25	50	50	ENSMUST00000131023.8	ENSMUSG00000000290.14	Itgb2	chr10	protein_coding	integrin beta 2
chr10	77378380	77381847	+	77366293	77381847	A5SS	0.25	50	50	ENSMUST00000131023.8	ENSMUSG00000000290.14	Itgb2	chr10	protein_coding	integrin beta 2
chr10	77377860;77378380	77378232;77381847	+	77377860	77381847	cassetteExon	0.5	100	100	ENSMUST00000130059.8	ENSMUSG00000000290.14	Itgb2	chr10	protein_coding	integrin beta 2
chr10	77393364;77393973	77393786;77395984	+	77393364	77395984	cassetteExon	0.5	100	100	ENSMUST00000156644.8	ENSMUSG00000000290.14	Itgb2	chr10	protein_coding	integrin beta 2
chr10	77395557	77395984	+	77393364	77395984	A5SS	0.33	50	50	ENSMUST00000156644.8	ENSMUSG00000000290.14	Itgb2	chr10	protein_coding	integrin beta 2
chr10	77417761;77422238	77422159;77423085	+	77417761	77423085	cassetteExon	0.5	100	100	ENSMUST00000009435.12	ENSMUSG00000009291.14	Pttg1ip	chr10	protein_coding	pituitary tumor-transforming 1 interacting protein
chr10	77417761;77422238	77422214;77423085	+	77417761	77423085	cassetteExon	0.5	100	100	ENSMUST00000009435.12	ENSMUSG00000009291.14	Pttg1ip	chr10	protein_coding	pituitary tumor-transforming 1 interacting protein
chr10	77418340	77423085	+	77417761	77423085	A5SS	0.25	50	50	ENSMUST00000009435.12	ENSMUSG00000009291.14	Pttg1ip	chr10	protein_coding	pituitary tumor-transforming 1 interacting protein
chr10	77419857	77423085	+	77417761	77423085	A5SS	0.25	50	50	ENSMUST00000009435.12	ENSMUSG00000009291.14	Pttg1ip	chr10	protein_coding	pituitary tumor-transforming 1 interacting protein
chr10	77417761	77428680	+	77417761	77423085	3pMXE	0.25	50	50	ENSMUST00000159116.2	ENSMUSG00000009291.14	Pttg1ip	chr10	protein_coding	pituitary tumor-transforming 1 interacting protein
chr10	77417761	77422159	+	77417761	77422214	A3SS	0.25	50	50	ENSMUST00000161789.8	ENSMUSG00000009291.14	Pttg1ip	chr10	protein_coding	pituitary tumor-transforming 1 interacting protein
chr10	77418340	77423085	+	77422238	77423085	A5SS&ES	0.25	50	50	ENSMUST00000161789.8	ENSMUSG00000009291.14	Pttg1ip	chr10	protein_coding	pituitary tumor-transforming 1 interacting protein
chr10	77419857	77423085	+	77422238	77423085	A5SS&ES	0.25	50	50	ENSMUST00000161789.8	ENSMUSG00000009291.14	Pttg1ip	chr10	protein_coding	pituitary tumor-transforming 1 interacting protein
chr10	77417761	77422159	+	77417761	77428680	A3SS	0.25	50	50	ENSMUST00000162429.8	ENSMUSG00000009291.14	Pttg1ip	chr10	protein_coding	pituitary tumor-transforming 1 interacting protein
chr10	77417761	77422214	+	77417761	77428680	A3SS	0.25	50	50	ENSMUST00000162429.8	ENSMUSG00000009291.14	Pttg1ip	chr10	protein_coding	pituitary tumor-transforming 1 interacting protein
chr10	77425576	77428680	+	77417761	77428680	A5SS	0.5	50	50	ENSMUST00000162429.8	ENSMUSG00000009291.14	Pttg1ip	chr10	protein_coding	pituitary tumor-transforming 1 interacting protein
chr10	77419857	77423085	+	77418340	77423085	A5SS	0.25	50	50	ENSMUST00000162943.9	ENSMUSG00000009291.14	Pttg1ip	chr10	protein_coding	pituitary tumor-transforming 1 interacting protein
chr10	77449885	77466560	+	77449885	77451982	3pMXE	0.25	50	50	ENSMUST00000020501.15	ENSMUSG00000020265.17	Sumo3	chr10	protein_coding	small ubiquitin-like modifier 3
chr10	77449885;77451868	77451761;77451982	+	77449885	77451982	cassetteExon	0.5	100	100	ENSMUST00000020501.15	ENSMUSG00000020265.17	Sumo3	chr10	protein_coding	small ubiquitin-like modifier 3
chr10	77449885	77452024	+	77449885	77451982	A3SS	0.25	50	50	ENSMUST00000020501.15	ENSMUSG00000020265.17	Sumo3	chr10	protein_coding	small ubiquitin-like modifier 3
chr10	77442184	77445646	+	77442175	77445646	A5SS	0.33	50	50	ENSMUST00000020501.15	ENSMUSG00000020265.17	Sumo3	chr10	protein_coding	small ubiquitin-like modifier 3
chr10	77442802	77445646	+	77442175	77445646	A5SS	0.33	50	50	ENSMUST00000020501.15	ENSMUSG00000020265.17	Sumo3	chr10	protein_coding	small ubiquitin-like modifier 3
chr10	77449645	77449814	+	77445774	77449814	A5SS	0.5	50	50	ENSMUST00000020501.15	ENSMUSG00000020265.17	Sumo3	chr10	protein_coding	small ubiquitin-like modifier 3
chr10	77449885	77452024	+	77449885	77451761	A3SS&ES	0.33	50	50	ENSMUST00000137841.9	ENSMUSG00000020265.17	Sumo3	chr10	protein_coding	small ubiquitin-like modifier 3
chr10	77442802	77445646	+	77442184	77445646	A5SS	0.33	50	50	ENSMUST00000129492.8	ENSMUSG00000020265.17	Sumo3	chr10	protein_coding	small ubiquitin-like modifier 3
chr10	77449885	77466560	+	77449885	77452024	3pMXE	0.25	50	50	ENSMUST00000141228.9	ENSMUSG00000020265.17	Sumo3	chr10	protein_coding	small ubiquitin-like modifier 3
chr10	77466728	77479303	+	77466728	77477294	3pMXE	0.33	50	50	ENSMUST00000174113.8	ENSMUSG00000112241.2	Gm49325	chr10	protein_coding	predicted gene, 49325
chr10	77466728;77470619	77470494;77477294	+	77466728	77477294	cassetteExon	0.5	100	100	ENSMUST00000174113.8	ENSMUSG00000112241.2	Gm49325	chr10	protein_coding	predicted gene, 49325
chr10	77449885	77451761	+	77449885	77466560	A3SS	0.25	50	50	ENSMUST00000174113.8	ENSMUSG00000112241.2	Gm49325	chr10	protein_coding	predicted gene, 49325
chr10	77458250	77466560	+	77449885	77466560	A5SS	0.5	50	50	ENSMUST00000174113.8	ENSMUSG00000112241.2	Gm49325	chr10	protein_coding	predicted gene, 49325
chr10	77458250	77477294	+	77466728	77477294	A5SS&ES	0.33	50	50	ENSMUST00000174113.8	ENSMUSG00000112241.2	Gm49325	chr10	protein_coding	predicted gene, 49325
chr10	77466728	77479303	+	77466728;77477412	77477294;77479303	ES	0.5	50	50	ENSMUST00000174510.8	ENSMUSG00000009293.18	Ube2g2	chr10	protein_coding	ubiquitin-conjugating enzyme E2G 2
chr10	77458250;77466728	77466560;77477294	+	77458250	77477294	cassetteExon	0.5	100	100	ENSMUST00000172813.2	ENSMUSG00000009293.18	Ube2g2	chr10	protein_coding	ubiquitin-conjugating enzyme E2G 2
chr10	77458250;77466728	77466560;77479303	+	77458250;77477412	77477294;77479303	MXE	0.5	100	100	ENSMUST00000172813.2	ENSMUSG00000009293.18	Ube2g2	chr10	protein_coding	ubiquitin-conjugating enzyme E2G 2
chr10	77470619	77477294	+	77458250	77477294	A5SS	0.33	50	50	ENSMUST00000172813.2	ENSMUSG00000009293.18	Ube2g2	chr10	protein_coding	ubiquitin-conjugating enzyme E2G 2
chr10	77466728	77470494	+	77466728	77479303	A3SS	0.33	50	50	ENSMUST00000174546.8	ENSMUSG00000009293.18	Ube2g2	chr10	protein_coding	ubiquitin-conjugating enzyme E2G 2
chr10	77466728	77479303	+	77477412	77479303	5pMXE	0.5	50	50	ENSMUST00000173360.2	ENSMUSG00000009293.18	Ube2g2	chr10	protein_coding	ubiquitin-conjugating enzyme E2G 2
chr10	77802930	77805617	-	77802930;77805133	77804991;77805617	ES	0.5	50	50	ENSMUST00000105401.9	ENSMUSG00000009292.19	Trpm2	chr10	protein_coding	transient receptor potential cation channel, subfamily M, member 2
chr10	77766491	77767969	-	77766488	77767969	A3SS	0.5	50	50	ENSMUST00000105401.9	ENSMUSG00000009292.19	Trpm2	chr10	protein_coding	transient receptor potential cation channel, subfamily M, member 2
chr10	77798854	77801813	-	77795874	77801813	A3SS	0.5	50	50	ENSMUST00000105401.9	ENSMUSG00000009292.19	Trpm2	chr10	protein_coding	transient receptor potential cation channel, subfamily M, member 2
chr10	77756366	77756622	-	77756366	77759331	A5SS	0.5	50	50	ENSMUST00000105401.9	ENSMUSG00000009292.19	Trpm2	chr10	protein_coding	transient receptor potential cation channel, subfamily M, member 2
chr10	77802930	77805617	-	77802930	77804991	A5SS&ES	0.5	50	50	ENSMUST00000154996.2	ENSMUSG00000009292.19	Trpm2	chr10	protein_coding	transient receptor potential cation channel, subfamily M, member 2
chr10	77817647;77818520	77818384;77818704	+	77817647	77818704	cassetteExon	0.5	100	100	ENSMUST00000105397.10	ENSMUSG00000020284.17	Cfap410	chr10	protein_coding	cilia and flagella associated protein 410
chr10	77819425;77819839	77819779;77820253	+	77819425	77820253	cassetteExon	0.5	100	100	ENSMUST00000105397.10	ENSMUSG00000020284.17	Cfap410	chr10	protein_coding	cilia and flagella associated protein 410
chr10	77819425	77820873	+	77819425	77820253	A3SS	0.33	50	50	ENSMUST00000105397.10	ENSMUSG00000020284.17	Cfap410	chr10	protein_coding	cilia and flagella associated protein 410
chr10	77815885	77816335	+	77815605	77816335	A5SS	0.5	50	50	ENSMUST00000105397.10	ENSMUSG00000020284.17	Cfap410	chr10	protein_coding	cilia and flagella associated protein 410
chr10	77819425	77819779	+	77819425	77820873	A3SS	0.33	50	50	ENSMUST00000105398.2	ENSMUSG00000020284.17	Cfap410	chr10	protein_coding	cilia and flagella associated protein 410
chr10	77837921	77845433	-	77837921;77841348	77841275;77845433	ES	0.5	50	50	ENSMUST00000020522.9	ENSMUSG00000020277.11	Pfkl	chr10	protein_coding	phosphofructokinase, liver, B-type
chr10	77841348	77845839	-	77841348	77845433	5pMXE	0.5	50	50	ENSMUST00000020522.9	ENSMUSG00000020277.11	Pfkl	chr10	protein_coding	phosphofructokinase, liver, B-type
chr10	77832592	77833358	-	77832246	77833358	A3SS	0.33	50	50	ENSMUST00000020522.9	ENSMUSG00000020277.11	Pfkl	chr10	protein_coding	phosphofructokinase, liver, B-type
chr10	77832998	77833358	-	77832246	77833358	A3SS	0.33	50	50	ENSMUST00000020522.9	ENSMUSG00000020277.11	Pfkl	chr10	protein_coding	phosphofructokinase, liver, B-type
chr10	77832592;77832998	77832919;77833358	-	77832592	77833358	cassetteExon	0.5	100	100	ENSMUST00000220064.2	ENSMUSG00000020277.11	Pfkl	chr10	protein_coding	phosphofructokinase, liver, B-type
chr10	77837921	77845433	-	77837921	77841275	A5SS&ES	0.5	50	50	ENSMUST00000145716.2	ENSMUSG00000020277.11	Pfkl	chr10	protein_coding	phosphofructokinase, liver, B-type
chr10	77870541	77872519	-	77870541;77871667	77871491;77872519	ES	0.33	50	50	ENSMUST00000145975.8	ENSMUSG00000000731.16	Aire	chr10	protein_coding	autoimmune regulator (autoimmune polyendocrinopathy candidiasis ectodermal dystrophy)
chr10	77878910;77879103	77879051;77879223	-	77878910	77879223	cassetteExon	0.5	100	100	ENSMUST00000145975.8	ENSMUSG00000000731.16	Aire	chr10	protein_coding	autoimmune regulator (autoimmune polyendocrinopathy candidiasis ectodermal dystrophy)
chr10	77873819	77875496	-	77873822	77875496	A3SS	0.33	50	50	ENSMUST00000145975.8	ENSMUSG00000000731.16	Aire	chr10	protein_coding	autoimmune regulator (autoimmune polyendocrinopathy candidiasis ectodermal dystrophy)
chr10	77875395	77875496	-	77873822	77875496	A3SS	0.33	50	50	ENSMUST00000145975.8	ENSMUSG00000000731.16	Aire	chr10	protein_coding	autoimmune regulator (autoimmune polyendocrinopathy candidiasis ectodermal dystrophy)
chr10	77875576	77875765	-	77875576	77875777	A5SS	0.5	50	50	ENSMUST00000145975.8	ENSMUSG00000000731.16	Aire	chr10	protein_coding	autoimmune regulator (autoimmune polyendocrinopathy candidiasis ectodermal dystrophy)
chr10	77873819;77875395	77875338;77875496	-	77873819	77875496	cassetteExon	0.5	100	100	ENSMUST00000130972.8	ENSMUSG00000000731.16	Aire	chr10	protein_coding	autoimmune regulator (autoimmune polyendocrinopathy candidiasis ectodermal dystrophy)
chr10	77875571	77875765	-	77875576	77875765	A3SS	0.5	50	50	ENSMUST00000128241.8	ENSMUSG00000000731.16	Aire	chr10	protein_coding	autoimmune regulator (autoimmune polyendocrinopathy candidiasis ectodermal dystrophy)
chr10	77870323	77872519	-	77870323;77871667	77870420;77872519	ES	0.33	50	50	ENSMUST00000131028.8	ENSMUSG00000000731.16	Aire	chr10	protein_coding	autoimmune regulator (autoimmune polyendocrinopathy candidiasis ectodermal dystrophy)
chr10	77870541	77872519	-	77871667	77872519	A3SS	0.33	50	50	ENSMUST00000131028.8	ENSMUSG00000000731.16	Aire	chr10	protein_coding	autoimmune regulator (autoimmune polyendocrinopathy candidiasis ectodermal dystrophy)
chr10	77870323	77872519	-	77870323;77870541	77870420;77872519	ES	0.33	50	50	ENSMUST00000155021.8	ENSMUSG00000000731.16	Aire	chr10	protein_coding	autoimmune regulator (autoimmune polyendocrinopathy candidiasis ectodermal dystrophy)
chr10	77871667	77872519	-	77870323	77872519	A3SS	0.33	50	50	ENSMUST00000140636.8	ENSMUSG00000000731.16	Aire	chr10	protein_coding	autoimmune regulator (autoimmune polyendocrinopathy candidiasis ectodermal dystrophy)
chr10	77878222	77881709	+	77877961	77881709	A5SS	0.5	50	50	ENSMUST00000135316.2	ENSMUSG00000000730.14	Dnmt3l	chr10	protein_coding	DNA (cytosine-5-)-methyltransferase 3-like
chr10	77885745	77885850	+	77881822	77885850	A5SS	0.5	50	50	ENSMUST00000138785.8	ENSMUSG00000000730.14	Dnmt3l	chr10	protein_coding	DNA (cytosine-5-)-methyltransferase 3-like
chr10	77891550	77892679	+	77890900	77892679	A5SS	0.33	50	50	ENSMUST00000138785.8	ENSMUSG00000000730.14	Dnmt3l	chr10	protein_coding	DNA (cytosine-5-)-methyltransferase 3-like
chr10	77892584	77892679	+	77890900	77892679	A5SS	0.33	50	50	ENSMUST00000138785.8	ENSMUSG00000000730.14	Dnmt3l	chr10	protein_coding	DNA (cytosine-5-)-methyltransferase 3-like
chr10	77891550;77892584	77892246;77892679	+	77891550	77892679	cassetteExon	0.5	100	100	ENSMUST00000131825.8	ENSMUSG00000000730.14	Dnmt3l	chr10	protein_coding	DNA (cytosine-5-)-methyltransferase 3-like
chr10	77891550;77892584	77892419;77892679	+	77891550	77892679	cassetteExon	0.5	100	100	ENSMUST00000131825.8	ENSMUSG00000000730.14	Dnmt3l	chr10	protein_coding	DNA (cytosine-5-)-methyltransferase 3-like
chr10	77891550	77892246	+	77891550	77892419	A3SS	0.33	50	50	ENSMUST00000139539.8	ENSMUSG00000000730.14	Dnmt3l	chr10	protein_coding	DNA (cytosine-5-)-methyltransferase 3-like
chr10	77913007	77919004	+	77913007	77913727	3pMXE	0.5	50	50	ENSMUST00000105393.3	ENSMUSG00000000732.10	Icosl	chr10	protein_coding	icos ligand
chr10	77999387	78003229	-	77999387;78000764	78000672;78003229	ES	0.5	50	50	ENSMUST00000001242.9	ENSMUSG00000053329.8	Gatd3a	chr10	protein_coding	glutamine amidotransferase like class 1 domain containing 3A
chr10	78056218	78064613	-	78056218;78058694	78058498;78064613	ES	0.5	50	50	ENSMUST00000000384.8	ENSMUSG00000000374.9	Trappc10	chr10	protein_coding	trafficking protein particle complex 10
chr10	78037420	78038714	-	78037424	78038714	A3SS	0.5	50	50	ENSMUST00000000384.8	ENSMUSG00000000374.9	Trappc10	chr10	protein_coding	trafficking protein particle complex 10
chr10	78085087	78095638	-	78085087	78091681	5pMXE	0.33	50	50	ENSMUST00000218886.2	ENSMUSG00000112433.2	Gm30122	chr10	lncRNA	predicted gene, 30122
chr10	78085087	78098905	-	78085087	78091681	5pMXE	0.33	50	50	ENSMUST00000218886.2	ENSMUSG00000112433.2	Gm30122	chr10	lncRNA	predicted gene, 30122
chr10	78085087	78098905	-	78085087;78095750	78095638;78098905	ES	0.5	50	50	ENSMUST00000218662.2	ENSMUSG00000112433.2	Gm30122	chr10	lncRNA	predicted gene, 30122
chr10	78165170;78187545	78187461;78188047	-	78165170	78188047	cassetteExon	0.5	100	100	ENSMUST00000001240.12	ENSMUSG00000001211.16	Agpat3	chr10	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 3
chr10	78120939	78123681	-	78120998	78123681	A3SS	0.5	50	50	ENSMUST00000001240.12	ENSMUSG00000001211.16	Agpat3	chr10	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 3
chr10	78123907	78131169	-	78123907	78165110	A5SS	0.2	50	50	ENSMUST00000001240.12	ENSMUSG00000001211.16	Agpat3	chr10	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 3
chr10	78123907	78133659	-	78123907	78165110	A5SS	0.2	50	50	ENSMUST00000001240.12	ENSMUSG00000001211.16	Agpat3	chr10	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 3
chr10	78123907	78143111	-	78123907	78165110	A5SS	0.2	50	50	ENSMUST00000001240.12	ENSMUSG00000001211.16	Agpat3	chr10	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 3
chr10	78123907	78156493	-	78123907	78165110	A5SS	0.2	50	50	ENSMUST00000001240.12	ENSMUSG00000001211.16	Agpat3	chr10	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 3
chr10	78123907	78143111	-	78123907	78133659	5pMXE	0.2	50	50	ENSMUST00000105389.8	ENSMUSG00000001211.16	Agpat3	chr10	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 3
chr10	78123907	78156493	-	78123907	78133659	5pMXE	0.2	50	50	ENSMUST00000105389.8	ENSMUSG00000001211.16	Agpat3	chr10	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 3
chr10	78123907	78131169	-	78123907	78133659	A5SS	0.2	50	50	ENSMUST00000105389.8	ENSMUSG00000001211.16	Agpat3	chr10	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 3
chr10	78165170	78188047	-	78165170	78187461	5pMXE	0.5	50	50	ENSMUST00000166360.8	ENSMUSG00000001211.16	Agpat3	chr10	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 3
chr10	78187545	78188047	-	78187545	78187637	5pMXE	0.33	50	50	ENSMUST00000105390.8	ENSMUSG00000001211.16	Agpat3	chr10	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 3
chr10	78187545	78187657	-	78187545	78187637	A5SS	0.33	50	50	ENSMUST00000105390.8	ENSMUSG00000001211.16	Agpat3	chr10	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 3
chr10	78187545	78188047	-	78187545	78187657	5pMXE	0.33	50	50	ENSMUST00000105388.8	ENSMUSG00000001211.16	Agpat3	chr10	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 3
chr10	78123907	78143111	-	78123907	78131169	5pMXE	0.2	50	50	ENSMUST00000105387.8	ENSMUSG00000001211.16	Agpat3	chr10	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 3
chr10	78123907	78156493	-	78123907	78131169	5pMXE	0.2	50	50	ENSMUST00000105387.8	ENSMUSG00000001211.16	Agpat3	chr10	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 3
chr10	78123907	78143111	-	78123907	78156493	A5SS	0.2	50	50	ENSMUST00000139282.8	ENSMUSG00000001211.16	Agpat3	chr10	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 3
chr10	78188761	78189140	+	78188761	78188998	3pMXE	0.33	50	50	ENSMUST00000219014.2	ENSMUSG00000112641.2	Gm40709	chr10	lncRNA	predicted gene, 40709
chr10	78188761	78191300	+	78188761	78188998	3pMXE	0.33	50	50	ENSMUST00000219014.2	ENSMUSG00000112641.2	Gm40709	chr10	lncRNA	predicted gene, 40709
chr10	78188761	78189140	+	78188761	78191300	A3SS	0.33	50	50	ENSMUST00000220096.2	ENSMUSG00000112641.2	Gm40709	chr10	lncRNA	predicted gene, 40709
chr10	78246857;78247320	78247238;78248654	-	78246857	78248654	cassetteExon	0.5	100	100	ENSMUST00000219374.2	ENSMUSG00000061032.10	Rrp1	chr10	protein_coding	ribosomal RNA processing 1
chr10	78246853	78247238	-	78246857	78247238	A3SS	0.5	50	50	ENSMUST00000062678.11	ENSMUSG00000061032.10	Rrp1	chr10	protein_coding	ribosomal RNA processing 1
chr10	78247320	78248483	-	78247320	78248654	A5SS	0.33	50	50	ENSMUST00000062678.11	ENSMUSG00000061032.10	Rrp1	chr10	protein_coding	ribosomal RNA processing 1
chr10	78247320	78248721	-	78247320	78248654	A5SS	0.33	50	50	ENSMUST00000062678.11	ENSMUSG00000061032.10	Rrp1	chr10	protein_coding	ribosomal RNA processing 1
chr10	78246857	78248654	-	78246857	78247238	A5SS&ES	0.5	50	50	ENSMUST00000217835.2	ENSMUSG00000061032.10	Rrp1	chr10	protein_coding	ribosomal RNA processing 1
chr10	78247320	78248483	-	78247320	78248721	A5SS	0.33	50	50	ENSMUST00000217835.2	ENSMUSG00000061032.10	Rrp1	chr10	protein_coding	ribosomal RNA processing 1
chr10	78246857	78248654	-	78247320	78248654	A3SS&ES	0.5	50	50	ENSMUST00000217824.2	ENSMUSG00000061032.10	Rrp1	chr10	protein_coding	ribosomal RNA processing 1
chr10	78337952;78347124	78346985;78355564	-	78337952	78355564	cassetteExon	0.5	100	100	ENSMUST00000217911.2	ENSMUSG00000112224.2	Gm47944	chr10	lncRNA	predicted gene, 47944
chr10	78410499	78410921	+	78410402	78410921	A5SS	0.25	50	50	ENSMUST00000218061.2	ENSMUSG00000032763.12	Ilvbl	chr10	protein_coding	ilvB (bacterial acetolactate synthase)-like
chr10	78410668	78410921	+	78410402	78410921	A5SS	0.25	50	50	ENSMUST00000218061.2	ENSMUSG00000032763.12	Ilvbl	chr10	protein_coding	ilvB (bacterial acetolactate synthase)-like
chr10	78410829	78410921	+	78410402	78410921	A5SS	0.25	50	50	ENSMUST00000218061.2	ENSMUSG00000032763.12	Ilvbl	chr10	protein_coding	ilvB (bacterial acetolactate synthase)-like
chr10	78410499	78410921	+	78410668	78410921	A5SS	0.25	50	50	ENSMUST00000218787.2	ENSMUSG00000032763.12	Ilvbl	chr10	protein_coding	ilvB (bacterial acetolactate synthase)-like
chr10	78410829	78410921	+	78410668	78410921	A5SS	0.25	50	50	ENSMUST00000218787.2	ENSMUSG00000032763.12	Ilvbl	chr10	protein_coding	ilvB (bacterial acetolactate synthase)-like
chr10	78418963	78419298	+	78418963;78419223	78419054;78419298	ES	0.5	50	50	ENSMUST00000105384.5	ENSMUSG00000032763.12	Ilvbl	chr10	protein_coding	ilvB (bacterial acetolactate synthase)-like
chr10	78417024	78417248	+	78417024	78418849	A3SS	0.5	50	50	ENSMUST00000105384.5	ENSMUSG00000032763.12	Ilvbl	chr10	protein_coding	ilvB (bacterial acetolactate synthase)-like
chr10	78410829	78410921	+	78410499	78410921	A5SS	0.25	50	50	ENSMUST00000105384.5	ENSMUSG00000032763.12	Ilvbl	chr10	protein_coding	ilvB (bacterial acetolactate synthase)-like
chr10	78448487;78449709	78449250;78453734	-	78448487	78453734	cassetteExon	0.5	100	100	ENSMUST00000095473.6	ENSMUSG00000071185.6	Olfr1357	chr10	protein_coding	olfactory receptor 1357
chr10	78448487	78453734	-	78448487	78449250	A5SS&ES	0.5	50	50	ENSMUST00000213877.2	ENSMUSG00000071185.6	Olfr1357	chr10	protein_coding	olfactory receptor 1357
chr10	78449709	78453734	-	78449709	78453859	A5SS	0.5	50	50	ENSMUST00000213877.2	ENSMUSG00000071185.6	Olfr1357	chr10	protein_coding	olfactory receptor 1357
chr10	78551720	78553183	-	78551720	78553941	A5SS	0.5	50	50	ENSMUST00000005488.9	ENSMUSG00000005355.10	Casp14	chr10	protein_coding	caspase 14
chr10	78616658	78623596	+	78616515	78623596	A5SS	0.5	50	50	ENSMUST00000005490.10	ENSMUSG00000005357.10	Slc1a6	chr10	protein_coding	solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6
chr10	78749347	78752663	+	78749214	78752663	A5SS	0.5	50	50	ENSMUST00000204587.4	ENSMUSG00000094673.5	Olfr1354	chr10	protein_coding	olfactory receptor 1354
chr10	78786558	78791028	+	78786691	78791028	A5SS	0.5	50	50	ENSMUST00000214952.2	ENSMUSG00000094080.4	Olfr8	chr10	protein_coding	olfactory receptor 8
chr10	78799365	78805472	+	78799365;78802157	78802090;78805472	ES	0.5	50	50	ENSMUST00000039718.9	ENSMUSG00000042774.9	Olfr1353	chr10	protein_coding	olfactory receptor 1353
chr10	78817114	78819683	+	78817114	78819613	A3SS	0.5	50	50	ENSMUST00000058991.5	ENSMUSG00000046493.6	Olfr1352	chr10	protein_coding	olfactory receptor 1352
chr10	78903885	78904552	-	78903885	78904468	A5SS	0.5	50	50	ENSMUST00000039271.7	ENSMUSG00000060301.7	2610008E11Rik	chr10	protein_coding	RIKEN cDNA 2610008E11 gene
chr10	79213922	79216987	+	79213922;79215335	79214526;79216987	ES	0.5	50	50	ENSMUST00000170596.4	ENSMUSG00000091468.4	Vmn2r82	chr10	protein_coding	vomeronasal 2, receptor 82
chr10	79219107	79221186	+	79217214	79221186	A5SS	0.33	50	50	ENSMUST00000170596.4	ENSMUSG00000091468.4	Vmn2r82	chr10	protein_coding	vomeronasal 2, receptor 82
chr10	79221444	79231672	+	79221309	79231672	A5SS	0.5	50	50	ENSMUST00000170596.4	ENSMUSG00000091468.4	Vmn2r82	chr10	protein_coding	vomeronasal 2, receptor 82
chr10	79213922	79221186	+	79213922;79217214	79216987;79221186	ES	0.33	50	50	ENSMUST00000233963.2	ENSMUSG00000091468.4	Vmn2r82	chr10	protein_coding	vomeronasal 2, receptor 82
chr10	79213922	79214526	+	79213922	79216987	A3SS	0.33	50	50	ENSMUST00000233963.2	ENSMUSG00000091468.4	Vmn2r82	chr10	protein_coding	vomeronasal 2, receptor 82
chr10	79215335	79216987	+	79213922	79216987	A5SS	0.5	50	50	ENSMUST00000233963.2	ENSMUSG00000091468.4	Vmn2r82	chr10	protein_coding	vomeronasal 2, receptor 82
chr10	79213922	79214526	+	79213922	79221186	A3SS	0.33	50	50	ENSMUST00000232824.2	ENSMUSG00000091468.4	Vmn2r82	chr10	protein_coding	vomeronasal 2, receptor 82
chr10	79219107	79221186	+	79213922	79221186	A5SS	0.33	50	50	ENSMUST00000232824.2	ENSMUSG00000091468.4	Vmn2r82	chr10	protein_coding	vomeronasal 2, receptor 82
chr10	79213922	79221186	+	79213922;79219107	79216987;79221186	ES	0.33	50	50	ENSMUST00000233223.2	ENSMUSG00000091468.4	Vmn2r82	chr10	protein_coding	vomeronasal 2, receptor 82
chr10	79314452	79316041	+	79314452	79315920	A3SS	0.5	50	50	ENSMUST00000233065.2	ENSMUSG00000091381.4	Vmn2r83	chr10	protein_coding	vomeronasal 2, receptor 83
chr10	79304950	79313609	+	79305006	79313609	A5SS	0.5	50	50	ENSMUST00000233065.2	ENSMUSG00000091381.4	Vmn2r83	chr10	protein_coding	vomeronasal 2, receptor 83
chr10	79315067	79315920	+	79314452	79315920	A5SS	0.5	50	50	ENSMUST00000233065.2	ENSMUSG00000091381.4	Vmn2r83	chr10	protein_coding	vomeronasal 2, receptor 83
chr10	79315067	79316041	+	79314452	79316041	A5SS	0.5	50	50	ENSMUST00000233240.2	ENSMUSG00000091381.4	Vmn2r83	chr10	protein_coding	vomeronasal 2, receptor 83
chr10	79315067	79316041	+	79315067	79315920	A3SS	0.5	50	50	ENSMUST00000167976.4	ENSMUSG00000091381.4	Vmn2r83	chr10	protein_coding	vomeronasal 2, receptor 83
chr10	79366606	79369499	-	79366606;79366862	79366711;79369499	ES	0.5	50	50	ENSMUST00000163602.9	ENSMUSG00000052151.13	Plpp2	chr10	protein_coding	phospholipid phosphatase 2
chr10	79366606	79369458	-	79366606	79366711	A5SS&ES	0.33	50	50	ENSMUST00000163602.9	ENSMUSG00000052151.13	Plpp2	chr10	protein_coding	phospholipid phosphatase 2
chr10	79366862	79369458	-	79366862	79369499	A5SS	0.5	50	50	ENSMUST00000163602.9	ENSMUSG00000052151.13	Plpp2	chr10	protein_coding	phospholipid phosphatase 2
chr10	79366606	79369458	-	79366606;79366862	79366711;79369458	ES	0.33	50	50	ENSMUST00000063879.13	ENSMUSG00000052151.13	Plpp2	chr10	protein_coding	phospholipid phosphatase 2
chr10	79366815	79369458	-	79366862	79369458	A3SS	0.33	50	50	ENSMUST00000063879.13	ENSMUSG00000052151.13	Plpp2	chr10	protein_coding	phospholipid phosphatase 2
chr10	79366606	79369499	-	79366606	79366711	A5SS&ES	0.33	50	50	ENSMUST00000063879.13	ENSMUSG00000052151.13	Plpp2	chr10	protein_coding	phospholipid phosphatase 2
chr10	79366606	79369458	-	79366606;79366815	79366711;79369458	ES	0.33	50	50	ENSMUST00000166804.2	ENSMUSG00000052151.13	Plpp2	chr10	protein_coding	phospholipid phosphatase 2
chr10	79366606	79369458	-	79366606	79369499	A5SS	0.33	50	50	ENSMUST00000218241.2	ENSMUSG00000052151.13	Plpp2	chr10	protein_coding	phospholipid phosphatase 2
chr10	79385513	79390908	-	79385513;79386240	79386150;79390908	ES	0.5	50	50	ENSMUST00000062855.15	ENSMUSG00000042570.15	Mier2	chr10	protein_coding	MIER family member 2
chr10	79384743	79385018	-	79384737	79385018	A3SS	0.5	50	50	ENSMUST00000062855.15	ENSMUSG00000042570.15	Mier2	chr10	protein_coding	MIER family member 2
chr10	79385687	79386150	-	79385513	79386150	A3SS	0.5	50	50	ENSMUST00000062855.15	ENSMUSG00000042570.15	Mier2	chr10	protein_coding	MIER family member 2
chr10	79378555	79379915	-	79378555	79380354	A5SS	0.5	50	50	ENSMUST00000062855.15	ENSMUSG00000042570.15	Mier2	chr10	protein_coding	MIER family member 2
chr10	79386240	79390380	-	79386240	79390908	A5SS	0.33	50	50	ENSMUST00000062855.15	ENSMUSG00000042570.15	Mier2	chr10	protein_coding	MIER family member 2
chr10	79386240	79390745	-	79386240	79390908	A5SS	0.33	50	50	ENSMUST00000062855.15	ENSMUSG00000042570.15	Mier2	chr10	protein_coding	MIER family member 2
chr10	79385513	79390908	-	79386240	79390908	A3SS&ES	0.5	50	50	ENSMUST00000167183.8	ENSMUSG00000042570.15	Mier2	chr10	protein_coding	MIER family member 2
chr10	79386240	79390745	-	79386240	79390380	5pMXE	0.33	50	50	ENSMUST00000164895.8	ENSMUSG00000042570.15	Mier2	chr10	protein_coding	MIER family member 2
chr10	79385513	79390908	-	79385513	79386150	5pMXE	0.5	50	50	ENSMUST00000165866.2	ENSMUSG00000042570.15	Mier2	chr10	protein_coding	MIER family member 2
chr10	79421288;79421809	79421738;79422065	-	79421288	79422065	cassetteExon	0.5	100	100	ENSMUST00000077433.13	ENSMUSG00000020317.15	Theg	chr10	protein_coding	testicular haploid expressed gene
chr10	79449172	79449724	-	79449172	79449591	A5SS	0.5	50	50	ENSMUST00000059699.9	ENSMUSG00000045912.10	C2cd4c	chr10	protein_coding	C2 calcium-dependent domain containing 4C
chr10	79501591	79504071	+	79501591;79502604	79502173;79504071	ES	0.5	50	50	ENSMUST00000020554.8	ENSMUSG00000020310.10	Madcam1	chr10	protein_coding	mucosal vascular addressin cell adhesion molecule 1
chr10	79505885	79511234	+	79505617	79511234	A5SS	0.33	50	50	ENSMUST00000020552.8	ENSMUSG00000020308.8	Tpgs1	chr10	protein_coding	tubulin polyglutamylase complex subunit 1
chr10	79505975	79511234	+	79505617	79511234	A5SS	0.33	50	50	ENSMUST00000020552.8	ENSMUSG00000020308.8	Tpgs1	chr10	protein_coding	tubulin polyglutamylase complex subunit 1
chr10	79505975	79511234	+	79505885	79511234	A5SS	0.33	50	50	ENSMUST00000219585.2	ENSMUSG00000020308.8	Tpgs1	chr10	protein_coding	tubulin polyglutamylase complex subunit 1
chr10	79520936	79523683	+	79520936;79521201	79521067;79523683	ES	0.5	50	50	ENSMUST00000020550.13	ENSMUSG00000020307.16	Cdc34	chr10	protein_coding	cell division cycle 34
chr10	79520936	79521014	+	79520936	79521067	A3SS	0.33	50	50	ENSMUST00000020550.13	ENSMUSG00000020307.16	Cdc34	chr10	protein_coding	cell division cycle 34
chr10	79521201	79523687	+	79521201	79523683	A3SS	0.33	50	50	ENSMUST00000020550.13	ENSMUSG00000020307.16	Cdc34	chr10	protein_coding	cell division cycle 34
chr10	79521201	79523690	+	79521201	79523683	A3SS	0.33	50	50	ENSMUST00000020550.13	ENSMUSG00000020307.16	Cdc34	chr10	protein_coding	cell division cycle 34
chr10	79520236	79520652	+	79518424	79520652	A5SS	0.5	50	50	ENSMUST00000020550.13	ENSMUSG00000020307.16	Cdc34	chr10	protein_coding	cell division cycle 34
chr10	79521201	79523687	+	79521201	79523690	A3SS	0.33	50	50	ENSMUST00000220133.2	ENSMUSG00000020307.16	Cdc34	chr10	protein_coding	cell division cycle 34
chr10	79520936;79521201	79521014;79523683	+	79520936	79523683	cassetteExon	0.5	100	100	ENSMUST00000219791.2	ENSMUSG00000020307.16	Cdc34	chr10	protein_coding	cell division cycle 34
chr10	79520936	79523683	+	79520936	79521067	A3SS&ES	0.33	50	50	ENSMUST00000219930.2	ENSMUSG00000020307.16	Cdc34	chr10	protein_coding	cell division cycle 34
chr10	79520936	79523683	+	79520936	79521014	3pMXE	0.33	50	50	ENSMUST00000219074.2	ENSMUSG00000020307.16	Cdc34	chr10	protein_coding	cell division cycle 34
chr10	79529776	79529958	+	79528814	79529958	A5SS	0.5	50	50	ENSMUST00000020549.4	ENSMUSG00000054206.3	Gzmm	chr10	protein_coding	granzyme M (lymphocyte met-ase 1)
chr10	79540418;79544878	79544531;79545505	+	79540418	79545505	cassetteExon	0.5	100	100	ENSMUST00000179781.8	ENSMUSG00000023175.16	Bsg	chr10	protein_coding	basigin
chr10	79546236	79546459	+	79546236	79546472	A3SS	0.5	50	50	ENSMUST00000179781.8	ENSMUSG00000023175.16	Bsg	chr10	protein_coding	basigin
chr10	79575765	79576413	-	79575765;79576199	79575978;79576413	ES	0.5	50	50	ENSMUST00000161765.8	ENSMUSG00000020329.13	Polrmt	chr10	protein_coding	polymerase (RNA) mitochondrial (DNA directed)
chr10	79579562;79579853	79579713;79581508	-	79579562	79581508	cassetteExon	0.5	100	100	ENSMUST00000161765.8	ENSMUSG00000020329.13	Polrmt	chr10	protein_coding	polymerase (RNA) mitochondrial (DNA directed)
chr10	79574044;79574244	79574162;79574516	-	79574044	79574516	cassetteExon	0.5	100	100	ENSMUST00000161662.8	ENSMUSG00000020329.13	Polrmt	chr10	protein_coding	polymerase (RNA) mitochondrial (DNA directed)
chr10	79574044;79574284	79574162;79574516	-	79574044	79574516	cassetteExon	0.5	100	100	ENSMUST00000161662.8	ENSMUSG00000020329.13	Polrmt	chr10	protein_coding	polymerase (RNA) mitochondrial (DNA directed)
chr10	79574244	79574516	-	79574284	79574516	A3SS	0.33	50	50	ENSMUST00000159082.8	ENSMUSG00000020329.13	Polrmt	chr10	protein_coding	polymerase (RNA) mitochondrial (DNA directed)
chr10	79574044	79574516	-	79574044	79574162	5pMXE	0.5	50	50	ENSMUST00000162687.2	ENSMUSG00000020329.13	Polrmt	chr10	protein_coding	polymerase (RNA) mitochondrial (DNA directed)
chr10	79592517	79592598	+	79592517	79592621	A3SS	0.5	50	50	ENSMUST00000219981.2	ENSMUSG00000020327.5	Fgf22	chr10	protein_coding	fibroblast growth factor 22
chr10	79596916	79597399	-	79596916;79597333	79597264;79597399	ES	0.5	50	50	ENSMUST00000047203.9	ENSMUSG00000035890.10	Rnf126	chr10	protein_coding	ring finger protein 126
chr10	79598539	79602710	-	79598539	79602587	A5SS	0.5	50	50	ENSMUST00000047203.9	ENSMUSG00000035890.10	Rnf126	chr10	protein_coding	ring finger protein 126
chr10	79596916	79597399	-	79596916	79597264	A5SS	0.5	50	50	ENSMUST00000219189.2	ENSMUSG00000035890.10	Rnf126	chr10	protein_coding	ring finger protein 126
chr10	79616559	79616958	+	79616014	79616958	A5SS	0.5	50	50	ENSMUST00000020575.5	ENSMUSG00000020325.11	Fstl3	chr10	protein_coding	follistatin-like 3
chr10	79619233	79620180	-	79619294	79620180	A3SS	0.5	50	50	ENSMUST00000020573.13	ENSMUSG00000020323.15	Prss57	chr10	protein_coding	protease, serine 57
chr10	79619294	79620288	-	79619294	79620180	A5SS	0.5	50	50	ENSMUST00000020573.13	ENSMUSG00000020323.15	Prss57	chr10	protein_coding	protease, serine 57
chr10	79651075	79654875	+	79651075;79652757	79652626;79654875	ES	0.5	50	50	ENSMUST00000046945.13	ENSMUSG00000035863.15	Palm	chr10	protein_coding	paralemmin
chr10	79645454	79646262	+	79645454	79648177	A3SS	0.5	50	50	ENSMUST00000046945.13	ENSMUSG00000035863.15	Palm	chr10	protein_coding	paralemmin
chr10	79641911	79642474	+	79629574	79642474	A5SS	0.33	50	50	ENSMUST00000046945.13	ENSMUSG00000035863.15	Palm	chr10	protein_coding	paralemmin
chr10	79642077	79642474	+	79629574	79642474	A5SS	0.33	50	50	ENSMUST00000046945.13	ENSMUSG00000035863.15	Palm	chr10	protein_coding	paralemmin
chr10	79650595	79651019	+	79648198	79651019	A5SS	0.5	50	50	ENSMUST00000046945.13	ENSMUSG00000035863.15	Palm	chr10	protein_coding	paralemmin
chr10	79641911	79642474	+	79642077	79642474	A5SS	0.33	50	50	ENSMUST00000217759.2	ENSMUSG00000035863.15	Palm	chr10	protein_coding	paralemmin
chr10	79658520	79661530	+	79656927	79661530	A5SS	0.2	50	50	ENSMUST00000169041.9	ENSMUSG00000035852.12	Misp	chr10	protein_coding	mitotic spindle positioning
chr10	79658569	79661530	+	79656927	79661530	A5SS	0.2	50	50	ENSMUST00000169041.9	ENSMUSG00000035852.12	Misp	chr10	protein_coding	mitotic spindle positioning
chr10	79658574	79661530	+	79656927	79661530	A5SS	0.2	50	50	ENSMUST00000169041.9	ENSMUSG00000035852.12	Misp	chr10	protein_coding	mitotic spindle positioning
chr10	79660581	79661530	+	79656927	79661530	A5SS	0.2	50	50	ENSMUST00000169041.9	ENSMUSG00000035852.12	Misp	chr10	protein_coding	mitotic spindle positioning
chr10	79658520	79661530	+	79658569	79661530	A5SS	0.2	50	50	ENSMUST00000219305.2	ENSMUSG00000035852.12	Misp	chr10	protein_coding	mitotic spindle positioning
chr10	79658574	79661530	+	79658569	79661530	A5SS	0.2	50	50	ENSMUST00000219305.2	ENSMUSG00000035852.12	Misp	chr10	protein_coding	mitotic spindle positioning
chr10	79660581	79661530	+	79658569	79661530	A5SS	0.2	50	50	ENSMUST00000219305.2	ENSMUSG00000035852.12	Misp	chr10	protein_coding	mitotic spindle positioning
chr10	79658574	79661530	+	79658520	79661530	A5SS	0.2	50	50	ENSMUST00000046833.5	ENSMUSG00000035852.12	Misp	chr10	protein_coding	mitotic spindle positioning
chr10	79660581	79661530	+	79658520	79661530	A5SS	0.2	50	50	ENSMUST00000046833.5	ENSMUSG00000035852.12	Misp	chr10	protein_coding	mitotic spindle positioning
chr10	79660581	79661530	+	79658574	79661530	A5SS	0.2	50	50	ENSMUST00000218687.2	ENSMUSG00000035852.12	Misp	chr10	protein_coding	mitotic spindle positioning
chr10	79690555	79694586	+	79690555;79692368	79692338;79694586	ES	0.33	50	50	ENSMUST00000172282.8	ENSMUSG00000006498.17	Ptbp1	chr10	protein_coding	polypyrimidine tract binding protein 1
chr10	79695789	79696658	+	79695789;79696028	79695951;79696658	ES	0.5	50	50	ENSMUST00000172282.8	ENSMUSG00000006498.17	Ptbp1	chr10	protein_coding	polypyrimidine tract binding protein 1
chr10	79696803	79698283	+	79696803;79697881	79697848;79698283	ES	0.5	50	50	ENSMUST00000172282.8	ENSMUSG00000006498.17	Ptbp1	chr10	protein_coding	polypyrimidine tract binding protein 1
chr10	79692368;79693529	79693413;79694586	+	79692368	79694586	cassetteExon	0.5	100	100	ENSMUST00000172282.8	ENSMUSG00000006498.17	Ptbp1	chr10	protein_coding	polypyrimidine tract binding protein 1
chr10	79690555	79692173	+	79690555	79692338	A3SS	0.33	50	50	ENSMUST00000172282.8	ENSMUSG00000006498.17	Ptbp1	chr10	protein_coding	polypyrimidine tract binding protein 1
chr10	79694658	79694906	+	79694658	79694786	A3SS	0.5	50	50	ENSMUST00000172282.8	ENSMUSG00000006498.17	Ptbp1	chr10	protein_coding	polypyrimidine tract binding protein 1
chr10	79690997	79692338	+	79690555	79692338	A5SS	0.5	50	50	ENSMUST00000172282.8	ENSMUSG00000006498.17	Ptbp1	chr10	protein_coding	polypyrimidine tract binding protein 1
chr10	79690555;79692368	79692173;79694586	+	79690555	79694586	cassetteExon	0.5	100	100	ENSMUST00000099958.9	ENSMUSG00000006498.17	Ptbp1	chr10	protein_coding	polypyrimidine tract binding protein 1
chr10	79693529	79694586	+	79690555	79694586	A5SS	0.33	50	50	ENSMUST00000099958.9	ENSMUSG00000006498.17	Ptbp1	chr10	protein_coding	polypyrimidine tract binding protein 1
chr10	79694815	79694906	+	79694815	79694923	A3SS	0.5	50	50	ENSMUST00000169483.8	ENSMUSG00000006498.17	Ptbp1	chr10	protein_coding	polypyrimidine tract binding protein 1
chr10	79694658;79694815	79694786;79694906	+	79694658	79694906	cassetteExon	0.5	100	100	ENSMUST00000095457.11	ENSMUSG00000006498.17	Ptbp1	chr10	protein_coding	polypyrimidine tract binding protein 1
chr10	79695789	79696658	+	79695789	79695951	3pMXE	0.5	50	50	ENSMUST00000171216.2	ENSMUSG00000006498.17	Ptbp1	chr10	protein_coding	polypyrimidine tract binding protein 1
chr10	79696803	79698283	+	79697881	79698283	5pMXE	0.5	50	50	ENSMUST00000164385.8	ENSMUSG00000006498.17	Ptbp1	chr10	protein_coding	polypyrimidine tract binding protein 1
chr10	79702712	79703006	-	79702864	79703006	A3SS	0.33	50	50	ENSMUST00000167250.8	ENSMUSG00000035835.15	Plppr3	chr10	protein_coding	phospholipid phosphatase related 3
chr10	79702822	79703006	-	79702864	79703006	A3SS	0.33	50	50	ENSMUST00000167250.8	ENSMUSG00000035835.15	Plppr3	chr10	protein_coding	phospholipid phosphatase related 3
chr10	79709941	79710123	-	79710004	79710123	A3SS	0.33	50	50	ENSMUST00000113452.9	ENSMUSG00000035835.15	Plppr3	chr10	protein_coding	phospholipid phosphatase related 3
chr10	79709989	79710123	-	79710004	79710123	A3SS	0.33	50	50	ENSMUST00000113452.9	ENSMUSG00000035835.15	Plppr3	chr10	protein_coding	phospholipid phosphatase related 3
chr10	79702822	79703006	-	79702712	79703006	A3SS	0.33	50	50	ENSMUST00000167897.8	ENSMUSG00000035835.15	Plppr3	chr10	protein_coding	phospholipid phosphatase related 3
chr10	79709989	79710123	-	79709941	79710123	A3SS	0.33	50	50	ENSMUST00000165601.8	ENSMUSG00000035835.15	Plppr3	chr10	protein_coding	phospholipid phosphatase related 3
chr10	79717999	79718623	+	79717999	79718652	A3SS	0.5	50	50	ENSMUST00000163188.8	ENSMUSG00000057729.13	Prtn3	chr10	protein_coding	proteinase 3
chr10	79716427	79716870	+	79710555	79716870	A5SS	0.5	50	50	ENSMUST00000163188.8	ENSMUSG00000057729.13	Prtn3	chr10	protein_coding	proteinase 3
chr10	79726814	79727290	+	79726814	79727293	A3SS	0.5	50	50	ENSMUST00000217837.2	ENSMUSG00000061780.7	Cfd	chr10	protein_coding	complement factor D (adipsin)
chr10	79742980	79744652	-	79742980;79743487	79743325;79744652	ES	0.25	50	50	ENSMUST00000105378.9	ENSMUSG00000013833.16	Med16	chr10	protein_coding	mediator complex subunit 16
chr10	79743345	79744652	-	79743487	79744652	A3SS	0.25	50	50	ENSMUST00000105378.9	ENSMUSG00000013833.16	Med16	chr10	protein_coding	mediator complex subunit 16
chr10	79743490	79744652	-	79743487	79744652	A3SS	0.25	50	50	ENSMUST00000105378.9	ENSMUSG00000013833.16	Med16	chr10	protein_coding	mediator complex subunit 16
chr10	79742980	79744652	-	79742980;79743490	79743325;79744652	ES	0.25	50	50	ENSMUST00000165684.8	ENSMUSG00000013833.16	Med16	chr10	protein_coding	mediator complex subunit 16
chr10	79743345	79744652	-	79743490	79744652	A3SS	0.25	50	50	ENSMUST00000165684.8	ENSMUSG00000013833.16	Med16	chr10	protein_coding	mediator complex subunit 16
chr10	79743490	79744052	-	79743490	79744652	A5SS	0.33	50	50	ENSMUST00000165684.8	ENSMUSG00000013833.16	Med16	chr10	protein_coding	mediator complex subunit 16
chr10	79743490	79744155	-	79743490	79744652	A5SS	0.33	50	50	ENSMUST00000165684.8	ENSMUSG00000013833.16	Med16	chr10	protein_coding	mediator complex subunit 16
chr10	79743490	79744052	-	79743490	79744155	A5SS	0.33	50	50	ENSMUST00000163125.2	ENSMUSG00000013833.16	Med16	chr10	protein_coding	mediator complex subunit 16
chr10	79742980	79744652	-	79742980;79743345	79743325;79744652	ES	0.25	50	50	ENSMUST00000164705.8	ENSMUSG00000013833.16	Med16	chr10	protein_coding	mediator complex subunit 16
chr10	79749180	79752657	-	79749180;79749545	79749391;79752657	ES	0.25	50	50	ENSMUST00000045628.15	ENSMUSG00000035781.15	R3hdm4	chr10	protein_coding	R3H domain containing 4
chr10	79749545	79756319	-	79749545	79752657	5pMXE	0.33	50	50	ENSMUST00000045628.15	ENSMUSG00000035781.15	R3hdm4	chr10	protein_coding	R3H domain containing 4
chr10	79749545;79750089	79749980;79752657	-	79749545	79752657	cassetteExon	0.5	100	100	ENSMUST00000045628.15	ENSMUSG00000035781.15	R3hdm4	chr10	protein_coding	R3H domain containing 4
chr10	79749515	79752657	-	79749545	79752657	A3SS	0.25	50	50	ENSMUST00000045628.15	ENSMUSG00000035781.15	R3hdm4	chr10	protein_coding	R3H domain containing 4
chr10	79749180;79749515	79749391;79752657	-	79749180	79752657	cassetteExon	0.5	100	100	ENSMUST00000218970.2	ENSMUSG00000035781.15	R3hdm4	chr10	protein_coding	R3H domain containing 4
chr10	79750089	79752657	-	79749180	79752657	A3SS	0.25	50	50	ENSMUST00000218970.2	ENSMUSG00000035781.15	R3hdm4	chr10	protein_coding	R3H domain containing 4
chr10	79750089	79752657	-	79749515	79752657	A3SS	0.25	50	50	ENSMUST00000218750.2	ENSMUSG00000035781.15	R3hdm4	chr10	protein_coding	R3H domain containing 4
chr10	79749545	79749980	-	79749545	79756319	A5SS	0.33	50	50	ENSMUST00000219867.2	ENSMUSG00000035781.15	R3hdm4	chr10	protein_coding	R3H domain containing 4
chr10	79756664	79757386	+	79757081	79757386	A5SS	0.5	50	50	ENSMUST00000219883.2	ENSMUSG00000035773.7	Kiss1r	chr10	protein_coding	KISS1 receptor
chr10	79756664	79757386	+	79756664;79757081	79756849;79757386	ES	0.5	50	50	ENSMUST00000045529.3	ENSMUSG00000035773.7	Kiss1r	chr10	protein_coding	KISS1 receptor
chr10	79785446	79786468	+	79785446	79786462	A3SS	0.5	50	50	ENSMUST00000019708.12	ENSMUSG00000019564.13	Arid3a	chr10	protein_coding	AT rich interactive domain 3A (BRIGHT-like)
chr10	79763234	79766469	+	79763090	79766469	A5SS	0.33	50	50	ENSMUST00000019708.12	ENSMUSG00000019564.13	Arid3a	chr10	protein_coding	AT rich interactive domain 3A (BRIGHT-like)
chr10	79766364	79766469	+	79763090	79766469	A5SS	0.33	50	50	ENSMUST00000019708.12	ENSMUSG00000019564.13	Arid3a	chr10	protein_coding	AT rich interactive domain 3A (BRIGHT-like)
chr10	79782146	79782319	+	79767912	79782319	A5SS	0.5	50	50	ENSMUST00000019708.12	ENSMUSG00000019564.13	Arid3a	chr10	protein_coding	AT rich interactive domain 3A (BRIGHT-like)
chr10	79766364	79766469	+	79763234	79766469	A5SS	0.33	50	50	ENSMUST00000105376.2	ENSMUSG00000019564.13	Arid3a	chr10	protein_coding	AT rich interactive domain 3A (BRIGHT-like)
chr10	79811951	79812228	+	79812039	79812228	A5SS	0.5	50	50	ENSMUST00000045085.8	ENSMUSG00000035745.10	Grin3b	chr10	protein_coding	glutamate receptor, ionotropic, NMDA3B
chr10	79828414	79829262	+	79828414;79829164	79829048;79829262	ES	0.5	50	50	ENSMUST00000004784.11	ENSMUSG00000004665.11	Cnn2	chr10	protein_coding	calponin 2
chr10	79843062	79843134	+	79843062	79843158	A3SS	0.5	50	50	ENSMUST00000132517.8	ENSMUSG00000035722.16	Abca7	chr10	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 7
chr10	79852937	79853614	+	79852752	79853614	A5SS	0.5	50	50	ENSMUST00000099501.10	ENSMUSG00000035697.15	Arhgap45	chr10	protein_coding	Rho GTPase activating protein 45
chr10	79855632	79856524	+	79853938	79856524	A5SS	0.5	50	50	ENSMUST00000099501.10	ENSMUSG00000035697.15	Arhgap45	chr10	protein_coding	Rho GTPase activating protein 45
chr10	79861380	79861990	+	79861381	79861990	A5SS	0.5	50	50	ENSMUST00000150022.2	ENSMUSG00000035697.15	Arhgap45	chr10	protein_coding	Rho GTPase activating protein 45
chr10	79872135	79872361	-	79872135	79872344	A5SS	0.5	50	50	ENSMUST00000147507.8	ENSMUSG00000004667.19	Polr2e	chr10	protein_coding	polymerase (RNA) II (DNA directed) polypeptide E
chr10	79890442;79890678	79890534;79890802	+	79890442	79890802	cassetteExon	0.5	100	100	ENSMUST00000144698.8	ENSMUSG00000075706.12	Gpx4	chr10	protein_coding	glutathione peroxidase 4
chr10	79889549	79890348	+	79884662	79890348	A5SS	0.25	50	50	ENSMUST00000144698.8	ENSMUSG00000075706.12	Gpx4	chr10	protein_coding	glutathione peroxidase 4
chr10	79890004	79890348	+	79884662	79890348	A5SS	0.25	50	50	ENSMUST00000144698.8	ENSMUSG00000075706.12	Gpx4	chr10	protein_coding	glutathione peroxidase 4
chr10	79890134	79890348	+	79884662	79890348	A5SS	0.25	50	50	ENSMUST00000144698.8	ENSMUSG00000075706.12	Gpx4	chr10	protein_coding	glutathione peroxidase 4
chr10	79890004	79890348	+	79889549	79890348	A5SS	0.25	50	50	ENSMUST00000105372.9	ENSMUSG00000075706.12	Gpx4	chr10	protein_coding	glutathione peroxidase 4
chr10	79890134	79890348	+	79889549	79890348	A5SS	0.25	50	50	ENSMUST00000105372.9	ENSMUSG00000075706.12	Gpx4	chr10	protein_coding	glutathione peroxidase 4
chr10	79890134	79890348	+	79890004	79890348	A5SS	0.25	50	50	ENSMUST00000145703.2	ENSMUSG00000075706.12	Gpx4	chr10	protein_coding	glutathione peroxidase 4
chr10	79905885	79918449	-	79905885;79908352	79908191;79918449	ES	0.33	50	50	ENSMUST00000219260.2	ENSMUSG00000035673.11	Sbno2	chr10	protein_coding	strawberry notch 2
chr10	79894563	79894639	-	79894566	79894639	A3SS	0.5	50	50	ENSMUST00000219260.2	ENSMUSG00000035673.11	Sbno2	chr10	protein_coding	strawberry notch 2
chr10	79917216	79918449	-	79908352	79918449	A3SS	0.33	50	50	ENSMUST00000219260.2	ENSMUSG00000035673.11	Sbno2	chr10	protein_coding	strawberry notch 2
chr10	79908352	79911062	-	79908352	79918449	A5SS	0.33	50	50	ENSMUST00000219260.2	ENSMUSG00000035673.11	Sbno2	chr10	protein_coding	strawberry notch 2
chr10	79908352	79915787	-	79908352	79918449	A5SS	0.33	50	50	ENSMUST00000219260.2	ENSMUSG00000035673.11	Sbno2	chr10	protein_coding	strawberry notch 2
chr10	79922266	79936906	-	79922266	79938444	A5SS	0.33	50	50	ENSMUST00000219260.2	ENSMUSG00000035673.11	Sbno2	chr10	protein_coding	strawberry notch 2
chr10	79922266	79938451	-	79922266	79938444	A5SS	0.33	50	50	ENSMUST00000219260.2	ENSMUSG00000035673.11	Sbno2	chr10	protein_coding	strawberry notch 2
chr10	79922266	79941361	-	79922266	79938451	5pMXE	0.25	50	50	ENSMUST00000042771.8	ENSMUSG00000035673.11	Sbno2	chr10	protein_coding	strawberry notch 2
chr10	79922266	79936906	-	79922266	79938451	A5SS	0.25	50	50	ENSMUST00000042771.8	ENSMUSG00000035673.11	Sbno2	chr10	protein_coding	strawberry notch 2
chr10	79922266	79941361	-	79922266	79936906	5pMXE	0.25	50	50	ENSMUST00000218630.2	ENSMUSG00000035673.11	Sbno2	chr10	protein_coding	strawberry notch 2
chr10	79908352	79915787	-	79908352	79911062	5pMXE	0.33	50	50	ENSMUST00000217972.2	ENSMUSG00000035673.11	Sbno2	chr10	protein_coding	strawberry notch 2
chr10	79917216	79918449	-	79905885	79918449	A3SS	0.33	50	50	ENSMUST00000218462.2	ENSMUSG00000035673.11	Sbno2	chr10	protein_coding	strawberry notch 2
chr10	79922266	79938444	-	79922266	79941361	A5SS	0.25	50	50	ENSMUST00000218462.2	ENSMUSG00000035673.11	Sbno2	chr10	protein_coding	strawberry notch 2
chr10	79908352	79918449	-	79908352;79917216	79915787;79918449	ES	0.5	50	50	ENSMUST00000219258.2	ENSMUSG00000035673.11	Sbno2	chr10	protein_coding	strawberry notch 2
chr10	79963934	79965739	+	79963934;79965534	79964225;79965739	ES	0.5	50	50	ENSMUST00000144883.8	ENSMUSG00000003068.18	Stk11	chr10	protein_coding	serine/threonine kinase 11
chr10	79952741	79953499	+	79952741	79960636	A3SS	0.5	50	50	ENSMUST00000144883.8	ENSMUSG00000003068.18	Stk11	chr10	protein_coding	serine/threonine kinase 11
chr10	79962936	79963792	+	79962936	79963738	A3SS	0.5	50	50	ENSMUST00000144883.8	ENSMUSG00000003068.18	Stk11	chr10	protein_coding	serine/threonine kinase 11
chr10	79952550	79960636	+	79952741	79960636	A5SS	0.5	50	50	ENSMUST00000144883.8	ENSMUSG00000003068.18	Stk11	chr10	protein_coding	serine/threonine kinase 11
chr10	79963934	79964225	+	79963934	79965739	A3SS	0.5	50	50	ENSMUST00000003152.14	ENSMUSG00000003068.18	Stk11	chr10	protein_coding	serine/threonine kinase 11
chr10	79965534	79965739	+	79963934	79965739	A5SS	0.5	50	50	ENSMUST00000003152.14	ENSMUSG00000003068.18	Stk11	chr10	protein_coding	serine/threonine kinase 11
chr10	79971080	79972184	-	79971080;79971380	79971209;79972184	ES	0.5	50	50	ENSMUST00000170219.9	ENSMUSG00000035640.19	Cbarp	chr10	protein_coding	calcium channel, voltage-dependent, beta subunit associated regulatory protein
chr10	79972772	79973122	-	79972772;79973016	79972877;79973122	ES	0.5	50	50	ENSMUST00000170219.9	ENSMUSG00000035640.19	Cbarp	chr10	protein_coding	calcium channel, voltage-dependent, beta subunit associated regulatory protein
chr10	79972328;79972577	79972497;79972708	-	79972328	79972708	cassetteExon	0.5	100	100	ENSMUST00000170219.9	ENSMUSG00000035640.19	Cbarp	chr10	protein_coding	calcium channel, voltage-dependent, beta subunit associated regulatory protein
chr10	79972328;79972577	79972524;79972708	-	79972328	79972708	cassetteExon	0.5	100	100	ENSMUST00000170219.9	ENSMUSG00000035640.19	Cbarp	chr10	protein_coding	calcium channel, voltage-dependent, beta subunit associated regulatory protein
chr10	79972328;79972577	79972539;79972708	-	79972328	79972708	cassetteExon	0.5	100	100	ENSMUST00000170219.9	ENSMUSG00000035640.19	Cbarp	chr10	protein_coding	calcium channel, voltage-dependent, beta subunit associated regulatory protein
chr10	79972328	79972497	-	79972328	79972539	A5SS	0.25	50	50	ENSMUST00000169546.9	ENSMUSG00000035640.19	Cbarp	chr10	protein_coding	calcium channel, voltage-dependent, beta subunit associated regulatory protein
chr10	79972328	79972524	-	79972328	79972539	A5SS	0.25	50	50	ENSMUST00000169546.9	ENSMUSG00000035640.19	Cbarp	chr10	protein_coding	calcium channel, voltage-dependent, beta subunit associated regulatory protein
chr10	79973221	79976214	-	79973221	79974920	5pMXE	0.25	50	50	ENSMUST00000105369.8	ENSMUSG00000035640.19	Cbarp	chr10	protein_coding	calcium channel, voltage-dependent, beta subunit associated regulatory protein
chr10	79973221	79973706	-	79973221	79974920	A5SS	0.25	50	50	ENSMUST00000105369.8	ENSMUSG00000035640.19	Cbarp	chr10	protein_coding	calcium channel, voltage-dependent, beta subunit associated regulatory protein
chr10	79973221	79974055	-	79973221	79974920	A5SS	0.25	50	50	ENSMUST00000105369.8	ENSMUSG00000035640.19	Cbarp	chr10	protein_coding	calcium channel, voltage-dependent, beta subunit associated regulatory protein
chr10	79972328	79972497	-	79972328	79972524	A5SS	0.25	50	50	ENSMUST00000147778.9	ENSMUSG00000035640.19	Cbarp	chr10	protein_coding	calcium channel, voltage-dependent, beta subunit associated regulatory protein
chr10	79971080	79972184	-	79971080	79971209	5pMXE	0.5	50	50	ENSMUST00000132317.8	ENSMUSG00000035640.19	Cbarp	chr10	protein_coding	calcium channel, voltage-dependent, beta subunit associated regulatory protein
chr10	79971080	79972184	-	79971380	79972184	3pMXE	0.5	50	50	ENSMUST00000149242.8	ENSMUSG00000035640.19	Cbarp	chr10	protein_coding	calcium channel, voltage-dependent, beta subunit associated regulatory protein
chr10	79973221	79974055	-	79973221	79973706	5pMXE	0.25	50	50	ENSMUST00000149242.8	ENSMUSG00000035640.19	Cbarp	chr10	protein_coding	calcium channel, voltage-dependent, beta subunit associated regulatory protein
chr10	79973221	79976214	-	79973221	79973706	5pMXE	0.25	50	50	ENSMUST00000149242.8	ENSMUSG00000035640.19	Cbarp	chr10	protein_coding	calcium channel, voltage-dependent, beta subunit associated regulatory protein
chr10	79972328	79972708	-	79972577	79972708	3pMXE	0.5	50	50	ENSMUST00000128488.8	ENSMUSG00000035640.19	Cbarp	chr10	protein_coding	calcium channel, voltage-dependent, beta subunit associated regulatory protein
chr10	79973221	79976214	-	79973221	79974055	5pMXE	0.25	50	50	ENSMUST00000138776.8	ENSMUSG00000035640.19	Cbarp	chr10	protein_coding	calcium channel, voltage-dependent, beta subunit associated regulatory protein
chr10	79977500	79977875	+	79976380	79977875	A5SS	0.5	50	50	ENSMUST00000150347.2	ENSMUSG00000003072.16	Atp5d	chr10	protein_coding	ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit
chr10	79979819	79981257	+	79979819;79981141	79981053;79981257	ES	0.5	50	50	ENSMUST00000105367.8	ENSMUSG00000003072.16	Atp5d	chr10	protein_coding	ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit
chr10	79987557;79989553	79989351;79989650	+	79987557	79989650	cassetteExon	0.5	100	100	ENSMUST00000099492.10	ENSMUSG00000035621.14	Midn	chr10	protein_coding	midnolin
chr10	79987557;79989553	79989425;79989650	+	79987557	79989650	cassetteExon	0.5	100	100	ENSMUST00000099492.10	ENSMUSG00000035621.14	Midn	chr10	protein_coding	midnolin
chr10	79985101	79985516	+	79984183	79985516	A5SS	0.5	50	50	ENSMUST00000099492.10	ENSMUSG00000035621.14	Midn	chr10	protein_coding	midnolin
chr10	79986416	79987212	+	79986147	79987212	A5SS	0.5	50	50	ENSMUST00000099492.10	ENSMUSG00000035621.14	Midn	chr10	protein_coding	midnolin
chr10	79987557	79989351	+	79987557	79989425	A3SS	0.33	50	50	ENSMUST00000042057.12	ENSMUSG00000035621.14	Midn	chr10	protein_coding	midnolin
chr10	79987557	79989650	+	79987557	79989351	3pMXE	0.33	50	50	ENSMUST00000124179.2	ENSMUSG00000035621.14	Midn	chr10	protein_coding	midnolin
chr10	79987557	79989650	+	79987557	79989425	3pMXE	0.33	50	50	ENSMUST00000144526.2	ENSMUSG00000035621.14	Midn	chr10	protein_coding	midnolin
chr10	80003750	80005642	+	80001910	80005642	A5SS	0.5	50	50	ENSMUST00000154726.8	ENSMUSG00000045193.14	Cirbp	chr10	protein_coding	cold inducible RNA binding protein
chr10	80006598	80008248	+	80006598	80006816	3pMXE	0.5	50	50	ENSMUST00000105365.9	ENSMUSG00000045193.14	Cirbp	chr10	protein_coding	cold inducible RNA binding protein
chr10	80062640	80064156	+	80062538	80064156	A5SS	0.5	50	50	ENSMUST00000020365.15	ENSMUSG00000020156.17	Pwwp3a	chr10	protein_coding	PWWP domain containing 3A, DNA repair factor
chr10	80078554	80079420	+	80077719	80079420	A5SS	0.5	50	50	ENSMUST00000020365.15	ENSMUSG00000020156.17	Pwwp3a	chr10	protein_coding	PWWP domain containing 3A, DNA repair factor
chr10	80062538	80064156	+	80062538	80064155	A3SS	0.5	50	50	ENSMUST00000141962.8	ENSMUSG00000020156.17	Pwwp3a	chr10	protein_coding	PWWP domain containing 3A, DNA repair factor
chr10	80088267	80088913	+	80088267	80088908	A3SS	0.5	50	50	ENSMUST00000105364.8	ENSMUSG00000020153.15	Ndufs7	chr10	protein_coding	NADH:ubiquinone oxidoreductase core subunit S7
chr10	80094932	80095011	-	80094884	80095011	A3SS	0.5	50	50	ENSMUST00000105363.8	ENSMUSG00000020150.14	Gamt	chr10	protein_coding	guanidinoacetate methyltransferase
chr10	80110703	80113406	+	80110703	80113409	A3SS	0.5	50	50	ENSMUST00000156935.8	ENSMUSG00000069565.13	Dazap1	chr10	protein_coding	DAZ associated protein 1
chr10	80101012	80109841	+	80097409	80109841	A5SS	0.5	50	50	ENSMUST00000156935.8	ENSMUSG00000069565.13	Dazap1	chr10	protein_coding	DAZ associated protein 1
chr10	80121260	80123370	+	80121260	80123373	A3SS	0.5	50	50	ENSMUST00000105362.8	ENSMUSG00000069565.13	Dazap1	chr10	protein_coding	DAZ associated protein 1
chr10	80135112	80137654	+	80131887	80137654	A5SS	0.25	50	50	ENSMUST00000105359.8	ENSMUSG00000020135.14	Apc2	chr10	protein_coding	APC regulator of WNT signaling pathway 2
chr10	80137083	80137654	+	80131887	80137654	A5SS	0.25	50	50	ENSMUST00000105359.8	ENSMUSG00000020135.14	Apc2	chr10	protein_coding	APC regulator of WNT signaling pathway 2
chr10	80137149	80137654	+	80131887	80137654	A5SS	0.25	50	50	ENSMUST00000105359.8	ENSMUSG00000020135.14	Apc2	chr10	protein_coding	APC regulator of WNT signaling pathway 2
chr10	80142340	80142963	+	80142355	80142963	A5SS	0.5	50	50	ENSMUST00000105359.8	ENSMUSG00000020135.14	Apc2	chr10	protein_coding	APC regulator of WNT signaling pathway 2
chr10	80137083	80137654	+	80135112	80137654	A5SS	0.25	50	50	ENSMUST00000154212.8	ENSMUSG00000020135.14	Apc2	chr10	protein_coding	APC regulator of WNT signaling pathway 2
chr10	80137149	80137654	+	80135112	80137654	A5SS	0.25	50	50	ENSMUST00000154212.8	ENSMUSG00000020135.14	Apc2	chr10	protein_coding	APC regulator of WNT signaling pathway 2
chr10	80137083	80137654	+	80137149	80137654	A5SS	0.25	50	50	ENSMUST00000140828.8	ENSMUSG00000020135.14	Apc2	chr10	protein_coding	APC regulator of WNT signaling pathway 2
chr10	80157755	80157915	-	80157785	80157915	A3SS	0.5	50	50	ENSMUST00000137177.8	ENSMUSG00000020131.15	Pcsk4	chr10	protein_coding	proprotein convertase subtilisin/kexin type 4
chr10	80161239	80161417	-	80161093	80161417	A3SS	0.5	50	50	ENSMUST00000128653.8	ENSMUSG00000020131.15	Pcsk4	chr10	protein_coding	proprotein convertase subtilisin/kexin type 4
chr10	80161239	80161607	-	80161505	80161607	A3SS&ES	0.5	50	50	ENSMUST00000128653.8	ENSMUSG00000020131.15	Pcsk4	chr10	protein_coding	proprotein convertase subtilisin/kexin type 4
chr10	80161239	80161607	-	80161239;80161505	80161417;80161607	ES	0.5	50	50	ENSMUST00000020340.15	ENSMUSG00000020131.15	Pcsk4	chr10	protein_coding	proprotein convertase subtilisin/kexin type 4
chr10	80169968	80170944	+	80169968;80170627	80170547;80170944	ES	0.33	50	50	ENSMUST00000105358.8	ENSMUSG00000035504.17	Reep6	chr10	protein_coding	receptor accessory protein 6
chr10	80169661	80170944	+	80169661;80169968	80169800;80170944	ES	0.33	50	50	ENSMUST00000105357.2	ENSMUSG00000035504.17	Reep6	chr10	protein_coding	receptor accessory protein 6
chr10	80169661	80170944	+	80169661	80169800	3pMXE	0.5	50	50	ENSMUST00000153167.2	ENSMUSG00000035504.17	Reep6	chr10	protein_coding	receptor accessory protein 6
chr10	80170627	80170944	+	80169661	80170944	A5SS	0.33	50	50	ENSMUST00000040081.7	ENSMUSG00000035504.17	Reep6	chr10	protein_coding	receptor accessory protein 6
chr10	80181537;80183171	80183116;80183391	-	80181537	80183391	cassetteExon	0.5	100	100	ENSMUST00000124789.8	ENSMUSG00000043822.19	Adamtsl5	chr10	protein_coding	ADAMTS-like 5
chr10	80181250	80181347	-	80181247	80181347	A3SS	0.5	50	50	ENSMUST00000124789.8	ENSMUSG00000043822.19	Adamtsl5	chr10	protein_coding	ADAMTS-like 5
chr10	80183689	80184190	-	80183459	80184190	A3SS	0.5	50	50	ENSMUST00000124789.8	ENSMUSG00000043822.19	Adamtsl5	chr10	protein_coding	ADAMTS-like 5
chr10	80180937	80181043	-	80180937	80181156	A5SS	0.5	50	50	ENSMUST00000124789.8	ENSMUSG00000043822.19	Adamtsl5	chr10	protein_coding	ADAMTS-like 5
chr10	80194192	80194621	+	80194192	80194609	A3SS	0.5	50	50	ENSMUST00000039836.15	ENSMUSG00000035486.15	Plk5	chr10	protein_coding	polo like kinase 5
chr10	80194750	80195076	+	80194751	80195076	A5SS	0.5	50	50	ENSMUST00000152544.8	ENSMUSG00000035486.15	Plk5	chr10	protein_coding	polo like kinase 5
chr10	80231119	80231270	-	80231035	80231270	A3SS	0.5	50	50	ENSMUST00000092295.10	ENSMUSG00000035478.15	Mbd3	chr10	protein_coding	methyl-CpG binding domain protein 3
chr10	80231429	80235052	-	80231429	80234956	A5SS	0.5	50	50	ENSMUST00000092295.10	ENSMUSG00000035478.15	Mbd3	chr10	protein_coding	methyl-CpG binding domain protein 3
chr10	80240120	80242334	-	80240120	80242391	A5SS	0.33	50	50	ENSMUST00000138428.8	ENSMUSG00000020163.13	Uqcr11	chr10	protein_coding	ubiquinol-cytochrome c reductase, complex III subunit XI
chr10	80240120	80242530	-	80240120	80242391	A5SS	0.33	50	50	ENSMUST00000138428.8	ENSMUSG00000020163.13	Uqcr11	chr10	protein_coding	ubiquinol-cytochrome c reductase, complex III subunit XI
chr10	80240120	80242334	-	80240120	80242530	A5SS	0.33	50	50	ENSMUST00000020372.6	ENSMUSG00000020163.13	Uqcr11	chr10	protein_coding	ubiquinol-cytochrome c reductase, complex III subunit XI
chr10	80246108;80248896	80248661;80249039	-	80246108;80246458	80246232;80249039	MXE	0.5	100	100	ENSMUST00000105344.8	ENSMUSG00000020167.15	Tcf3	chr10	protein_coding	transcription factor 3
chr10	80246455	80249039	-	80246458	80249039	A3SS	0.33	50	50	ENSMUST00000105344.8	ENSMUSG00000020167.15	Tcf3	chr10	protein_coding	transcription factor 3
chr10	80251354	80251687	-	80251357	80251687	A3SS	0.5	50	50	ENSMUST00000105344.8	ENSMUSG00000020167.15	Tcf3	chr10	protein_coding	transcription factor 3
chr10	80252614	80252924	-	80252623	80252924	A3SS	0.5	50	50	ENSMUST00000105344.8	ENSMUSG00000020167.15	Tcf3	chr10	protein_coding	transcription factor 3
chr10	80254649	80255301	-	80254652	80255301	A3SS	0.5	50	50	ENSMUST00000105344.8	ENSMUSG00000020167.15	Tcf3	chr10	protein_coding	transcription factor 3
chr10	80257239	80257424	-	80257239	80263505	A5SS	0.5	50	50	ENSMUST00000105344.8	ENSMUSG00000020167.15	Tcf3	chr10	protein_coding	transcription factor 3
chr10	80246108;80246455	80246232;80249039	-	80246108;80248896	80248661;80249039	MXE	0.5	100	100	ENSMUST00000105342.8	ENSMUSG00000020167.15	Tcf3	chr10	protein_coding	transcription factor 3
chr10	80246455	80249039	-	80248896	80249039	3pMXE	0.33	50	50	ENSMUST00000129027.2	ENSMUSG00000020167.15	Tcf3	chr10	protein_coding	transcription factor 3
chr10	80246458	80249039	-	80248896	80249039	3pMXE	0.33	50	50	ENSMUST00000129027.2	ENSMUSG00000020167.15	Tcf3	chr10	protein_coding	transcription factor 3
chr10	80357983	80360163	-	80357983;80359725	80359486;80360163	ES	0.5	50	50	ENSMUST00000020383.6	ENSMUSG00000003341.10	Atp8b3	chr10	protein_coding	ATPase, class I, type 8B, member 3
chr10	80361428	80361818	-	80361688	80361818	A3SS	0.5	50	50	ENSMUST00000020383.6	ENSMUSG00000003341.10	Atp8b3	chr10	protein_coding	ATPase, class I, type 8B, member 3
chr10	80371667	80372090	-	80371234	80372090	A3SS	0.5	50	50	ENSMUST00000020383.6	ENSMUSG00000003341.10	Atp8b3	chr10	protein_coding	ATPase, class I, type 8B, member 3
chr10	80379331	80379481	-	80379245	80379481	A3SS	0.5	50	50	ENSMUST00000182682.8	ENSMUSG00000047417.19	Rexo1	chr10	protein_coding	REX1, RNA exonuclease 1
chr10	80380278	80380594	-	80380254	80380594	A3SS	0.5	50	50	ENSMUST00000182682.8	ENSMUSG00000047417.19	Rexo1	chr10	protein_coding	REX1, RNA exonuclease 1
chr10	80380728	80381297	-	80380707	80381297	A3SS	0.5	50	50	ENSMUST00000057910.16	ENSMUSG00000047417.19	Rexo1	chr10	protein_coding	REX1, RNA exonuclease 1
chr10	80383425	80383607	-	80382299	80383607	A3SS	0.5	50	50	ENSMUST00000057910.16	ENSMUSG00000047417.19	Rexo1	chr10	protein_coding	REX1, RNA exonuclease 1
chr10	80384367	80384899	-	80384367	80385167	A5SS	0.5	50	50	ENSMUST00000057910.16	ENSMUSG00000047417.19	Rexo1	chr10	protein_coding	REX1, RNA exonuclease 1
chr10	80419897	80421442	-	80419897;80420156	80419977;80421442	ES	0.5	50	50	ENSMUST00000003436.12	ENSMUSG00000003346.15	Abhd17a	chr10	protein_coding	abhydrolase domain containing 17A
chr10	80422763	80426009	-	80422864	80426009	A3SS	0.5	50	50	ENSMUST00000003436.12	ENSMUSG00000003346.15	Abhd17a	chr10	protein_coding	abhydrolase domain containing 17A
chr10	80419897	80421442	-	80420156	80421442	A3SS	0.5	50	50	ENSMUST00000191440.7	ENSMUSG00000003346.15	Abhd17a	chr10	protein_coding	abhydrolase domain containing 17A
chr10	80438783;80439147	80439073;80444637	+	80438783	80444637	cassetteExon	0.5	100	100	ENSMUST00000220669.2	ENSMUSG00000113949.2	Scamp4	chr10	protein_coding	secretory carrier membrane protein 4
chr10	80445292;80445631	80445475;80446862	+	80445292	80446862	cassetteExon	0.5	100	100	ENSMUST00000220669.2	ENSMUSG00000113949.2	Scamp4	chr10	protein_coding	secretory carrier membrane protein 4
chr10	80438783	80441973	+	80438783	80444637	A3SS	0.25	50	50	ENSMUST00000220669.2	ENSMUSG00000113949.2	Scamp4	chr10	protein_coding	secretory carrier membrane protein 4
chr10	80438783	80442148	+	80438783	80444637	A3SS	0.25	50	50	ENSMUST00000220669.2	ENSMUSG00000113949.2	Scamp4	chr10	protein_coding	secretory carrier membrane protein 4
chr10	80444684	80445047	+	80444684	80445164	A3SS	0.5	50	50	ENSMUST00000220669.2	ENSMUSG00000113949.2	Scamp4	chr10	protein_coding	secretory carrier membrane protein 4
chr10	80442703	80444637	+	80438783	80444637	A5SS	0.33	50	50	ENSMUST00000220669.2	ENSMUSG00000113949.2	Scamp4	chr10	protein_coding	secretory carrier membrane protein 4
chr10	80445258	80445475	+	80445292	80445475	A5SS	0.5	50	50	ENSMUST00000079883.12	ENSMUSG00000113949.2	Scamp4	chr10	protein_coding	secretory carrier membrane protein 4
chr10	80445292	80446862	+	80445631	80446862	A5SS&ES	0.5	50	50	ENSMUST00000223256.2	ENSMUSG00000113949.2	Scamp4	chr10	protein_coding	secretory carrier membrane protein 4
chr10	80445292	80446862	+	80445292	80445475	3pMXE	0.5	50	50	ENSMUST00000221387.2	ENSMUSG00000113949.2	Scamp4	chr10	protein_coding	secretory carrier membrane protein 4
chr10	80438783	80441973	+	80438783	80439073	A3SS&ES	0.25	50	50	ENSMUST00000221032.2	ENSMUSG00000113949.2	Scamp4	chr10	protein_coding	secretory carrier membrane protein 4
chr10	80438783	80442148	+	80438783	80439073	A3SS&ES	0.25	50	50	ENSMUST00000221032.2	ENSMUSG00000113949.2	Scamp4	chr10	protein_coding	secretory carrier membrane protein 4
chr10	80439147	80441973	+	80439147	80444637	A3SS	0.5	50	50	ENSMUST00000221032.2	ENSMUSG00000113949.2	Scamp4	chr10	protein_coding	secretory carrier membrane protein 4
chr10	80442703	80444637	+	80439147	80444637	A5SS	0.33	50	50	ENSMUST00000221032.2	ENSMUSG00000113949.2	Scamp4	chr10	protein_coding	secretory carrier membrane protein 4
chr10	80438783	80444637	+	80439147	80444637	5pMXE	0.33	50	50	ENSMUST00000180350.3	ENSMUSG00000113949.2	Scamp4	chr10	protein_coding	secretory carrier membrane protein 4
chr10	80438783	80441973	+	80438783	80442148	A3SS	0.25	50	50	ENSMUST00000038411.5	ENSMUSG00000113640.2	Adat3	chr10	protein_coding	adenosine deaminase, tRNA-specific 3
chr10	80438783;80439147	80439073;80441973	+	80438783	80441973	cassetteExon	0.5	100	100	ENSMUST00000221960.2	ENSMUSG00000113640.2	Adat3	chr10	protein_coding	adenosine deaminase, tRNA-specific 3
chr10	80438783	80441973	+	80439147	80441973	5pMXE	0.5	50	50	ENSMUST00000221670.2	ENSMUSG00000113640.2	Adat3	chr10	protein_coding	adenosine deaminase, tRNA-specific 3
chr10	80475067	80475371	+	80475067	80475414	A3SS	0.5	50	50	ENSMUST00000079773.14	ENSMUSG00000003345.17	Csnk1g2	chr10	protein_coding	casein kinase 1, gamma 2
chr10	80465564	80470048	+	80458784	80470048	A5SS	0.5	50	50	ENSMUST00000079773.14	ENSMUSG00000003345.17	Csnk1g2	chr10	protein_coding	casein kinase 1, gamma 2
chr10	80470275	80473722	+	80470475	80473722	A5SS	0.5	50	50	ENSMUST00000079773.14	ENSMUSG00000003345.17	Csnk1g2	chr10	protein_coding	casein kinase 1, gamma 2
chr10	80480647	80481174	-	80480629	80481174	A3SS	0.5	50	50	ENSMUST00000126980.8	ENSMUSG00000003344.15	Btbd2	chr10	protein_coding	BTB (POZ) domain containing 2
chr10	80511774	80513770	-	80511774	80511915	5pMXE	0.5	50	50	ENSMUST00000200082.5	ENSMUSG00000020190.14	Mknk2	chr10	protein_coding	MAP kinase-interacting serine/threonine kinase 2
chr10	80507849	80508004	-	80507849	80511658	A5SS	0.5	50	50	ENSMUST00000200082.5	ENSMUSG00000020190.14	Mknk2	chr10	protein_coding	MAP kinase-interacting serine/threonine kinase 2
chr10	80527401;80537131	80537068;80537631	-	80527401	80537631	cassetteExon	0.5	100	100	ENSMUST00000003438.11	ENSMUSG00000003348.11	Mob3a	chr10	protein_coding	MOB kinase activator 3A
chr10	80535943	80537631	-	80527401	80537631	A3SS	0.33	50	50	ENSMUST00000003438.11	ENSMUSG00000003348.11	Mob3a	chr10	protein_coding	MOB kinase activator 3A
chr10	80527401	80529467	-	80527401	80537631	A5SS	0.33	50	50	ENSMUST00000003438.11	ENSMUSG00000003348.11	Mob3a	chr10	protein_coding	MOB kinase activator 3A
chr10	80535943	80537631	-	80537131	80537631	A3SS&ES	0.33	50	50	ENSMUST00000218090.2	ENSMUSG00000003348.11	Mob3a	chr10	protein_coding	MOB kinase activator 3A
chr10	80527401	80529467	-	80527401	80537068	A5SS	0.33	50	50	ENSMUST00000218090.2	ENSMUSG00000003348.11	Mob3a	chr10	protein_coding	MOB kinase activator 3A
chr10	80539762	80540014	+	80539762;80539920	80539873;80540014	ES	0.5	50	50	ENSMUST00000219987.2	ENSMUSG00000055862.8	Izumo4	chr10	protein_coding	IZUMO family member 4
chr10	80540269	80540455	+	80540269	80540533	A3SS	0.5	50	50	ENSMUST00000219987.2	ENSMUSG00000055862.8	Izumo4	chr10	protein_coding	IZUMO family member 4
chr10	80538793	80538883	+	80538188	80538883	A5SS	0.5	50	50	ENSMUST00000219987.2	ENSMUSG00000055862.8	Izumo4	chr10	protein_coding	IZUMO family member 4
chr10	80545790;80546126	80545923;80546254	-	80545790	80546254	cassetteExon	0.5	100	100	ENSMUST00000020420.9	ENSMUSG00000020198.9	Ap3d1	chr10	protein_coding	adaptor-related protein complex 3, delta 1 subunit
chr10	80563753	80565812	-	80563823	80565812	A3SS	0.5	50	50	ENSMUST00000020420.9	ENSMUSG00000020198.9	Ap3d1	chr10	protein_coding	adaptor-related protein complex 3, delta 1 subunit
chr10	80617308	80619018	+	80617308;80618018	80617977;80619018	ES	0.5	50	50	ENSMUST00000105336.9	ENSMUSG00000061589.15	Dot1l	chr10	protein_coding	DOT1-like, histone H3 methyltransferase (S. cerevisiae)
chr10	80626218	80629341	+	80626218;80627395	80626445;80629341	ES	0.33	50	50	ENSMUST00000105336.9	ENSMUSG00000061589.15	Dot1l	chr10	protein_coding	DOT1-like, histone H3 methyltransferase (S. cerevisiae)
chr10	80626218	80627977	+	80626218	80626445	A3SS&ES	0.33	50	50	ENSMUST00000105336.9	ENSMUSG00000061589.15	Dot1l	chr10	protein_coding	DOT1-like, histone H3 methyltransferase (S. cerevisiae)
chr10	80627395	80627578	+	80627395	80629341	A3SS	0.33	50	50	ENSMUST00000105336.9	ENSMUSG00000061589.15	Dot1l	chr10	protein_coding	DOT1-like, histone H3 methyltransferase (S. cerevisiae)
chr10	80627395	80627977	+	80627395	80629341	A3SS	0.33	50	50	ENSMUST00000105336.9	ENSMUSG00000061589.15	Dot1l	chr10	protein_coding	DOT1-like, histone H3 methyltransferase (S. cerevisiae)
chr10	80628607	80629341	+	80627395	80629341	A5SS	0.33	50	50	ENSMUST00000105336.9	ENSMUSG00000061589.15	Dot1l	chr10	protein_coding	DOT1-like, histone H3 methyltransferase (S. cerevisiae)
chr10	80600479	80601997	+	80600479	80606972	A3SS	0.5	50	50	ENSMUST00000127740.8	ENSMUSG00000061589.15	Dot1l	chr10	protein_coding	DOT1-like, histone H3 methyltransferase (S. cerevisiae)
chr10	80626218	80626445	+	80626218	80629341	A3SS	0.33	50	50	ENSMUST00000127740.8	ENSMUSG00000061589.15	Dot1l	chr10	protein_coding	DOT1-like, histone H3 methyltransferase (S. cerevisiae)
chr10	80626218	80627977	+	80626218	80629341	A3SS	0.33	50	50	ENSMUST00000127740.8	ENSMUSG00000061589.15	Dot1l	chr10	protein_coding	DOT1-like, histone H3 methyltransferase (S. cerevisiae)
chr10	80604502	80606972	+	80600479	80606972	A5SS	0.5	50	50	ENSMUST00000127740.8	ENSMUSG00000061589.15	Dot1l	chr10	protein_coding	DOT1-like, histone H3 methyltransferase (S. cerevisiae)
chr10	80627395	80629341	+	80626218	80629341	A5SS	0.33	50	50	ENSMUST00000127740.8	ENSMUSG00000061589.15	Dot1l	chr10	protein_coding	DOT1-like, histone H3 methyltransferase (S. cerevisiae)
chr10	80628607	80629341	+	80626218	80629341	A5SS	0.33	50	50	ENSMUST00000127740.8	ENSMUSG00000061589.15	Dot1l	chr10	protein_coding	DOT1-like, histone H3 methyltransferase (S. cerevisiae)
chr10	80626218	80629341	+	80626218;80628607	80627977;80629341	ES	0.33	50	50	ENSMUST00000150338.8	ENSMUSG00000061589.15	Dot1l	chr10	protein_coding	DOT1-like, histone H3 methyltransferase (S. cerevisiae)
chr10	80627395	80627977	+	80626218	80627977	A5SS	0.33	50	50	ENSMUST00000150338.8	ENSMUSG00000061589.15	Dot1l	chr10	protein_coding	DOT1-like, histone H3 methyltransferase (S. cerevisiae)
chr10	80627673	80627977	+	80626218	80627977	A5SS	0.33	50	50	ENSMUST00000150338.8	ENSMUSG00000061589.15	Dot1l	chr10	protein_coding	DOT1-like, histone H3 methyltransferase (S. cerevisiae)
chr10	80627395	80627977	+	80627395;80627673	80627578;80627977	ES	0.33	50	50	ENSMUST00000149394.2	ENSMUSG00000061589.15	Dot1l	chr10	protein_coding	DOT1-like, histone H3 methyltransferase (S. cerevisiae)
chr10	80632656	80633357	-	80632656	80633607	A5SS	0.5	50	50	ENSMUST00000218036.2	ENSMUSG00000035278.10	Plekhj1	chr10	protein_coding	pleckstrin homology domain containing, family J member 1
chr10	80633673	80633915	-	80633673;80633811	80633744;80633915	ES	0.33	50	50	ENSMUST00000036805.7	ENSMUSG00000035278.10	Plekhj1	chr10	protein_coding	pleckstrin homology domain containing, family J member 1
chr10	80632656;80633551	80633357;80633915	-	80632656;80633811	80633607;80633915	MXE	0.5	100	100	ENSMUST00000036805.7	ENSMUSG00000035278.10	Plekhj1	chr10	protein_coding	pleckstrin homology domain containing, family J member 1
chr10	80632452	80632566	-	80632488	80632566	A3SS	0.5	50	50	ENSMUST00000036805.7	ENSMUSG00000035278.10	Plekhj1	chr10	protein_coding	pleckstrin homology domain containing, family J member 1
chr10	80633673	80633915	-	80633811	80633915	A3SS	0.33	50	50	ENSMUST00000219767.2	ENSMUSG00000035278.10	Plekhj1	chr10	protein_coding	pleckstrin homology domain containing, family J member 1
chr10	80632656;80633551	80633357;80633915	-	80632656;80633673	80633607;80633915	MXE	0.5	100	100	ENSMUST00000219378.2	ENSMUSG00000035278.10	Plekhj1	chr10	protein_coding	pleckstrin homology domain containing, family J member 1
chr10	80633673	80633915	-	80633551	80633915	A3SS	0.33	50	50	ENSMUST00000218209.2	ENSMUSG00000035278.10	Plekhj1	chr10	protein_coding	pleckstrin homology domain containing, family J member 1
chr10	80633811	80633915	-	80633551	80633915	A3SS	0.33	50	50	ENSMUST00000218209.2	ENSMUSG00000035278.10	Plekhj1	chr10	protein_coding	pleckstrin homology domain containing, family J member 1
chr10	80639557	80639635	+	80639557	80639654	A3SS	0.5	50	50	ENSMUST00000148665.8	ENSMUSG00000020211.16	Sf3a2	chr10	protein_coding	splicing factor 3a, subunit 2
chr10	80634936	80637030	+	80634639	80637030	A5SS	0.5	50	50	ENSMUST00000148665.8	ENSMUSG00000020211.16	Sf3a2	chr10	protein_coding	splicing factor 3a, subunit 2
chr10	80646400	80647901	-	80646400	80647684	5pMXE	0.5	50	50	ENSMUST00000020435.11	ENSMUSG00000020216.14	Jsrp1	chr10	protein_coding	junctional sarcoplasmic reticulum protein 1
chr10	80647938	80649297	-	80647938;80648251	80648129;80649297	ES	0.5	50	50	ENSMUST00000181039.8	ENSMUSG00000020216.14	Jsrp1	chr10	protein_coding	junctional sarcoplasmic reticulum protein 1
chr10	80662739	80664077	+	80662739	80664071	A3SS	0.5	50	50	ENSMUST00000060987.15	ENSMUSG00000035242.16	Oaz1	chr10	protein_coding	ornithine decarboxylase antizyme 1
chr10	80664467	80664553	+	80664467	80664545	A3SS	0.5	50	50	ENSMUST00000060987.15	ENSMUSG00000035242.16	Oaz1	chr10	protein_coding	ornithine decarboxylase antizyme 1
chr10	80664630	80664727	+	80664630	80664705	A3SS	0.5	50	50	ENSMUST00000060987.15	ENSMUSG00000035242.16	Oaz1	chr10	protein_coding	ornithine decarboxylase antizyme 1
chr10	80663571	80664071	+	80662739	80664071	A5SS	0.5	50	50	ENSMUST00000060987.15	ENSMUSG00000035242.16	Oaz1	chr10	protein_coding	ornithine decarboxylase antizyme 1
chr10	80664128	80664130	+	80664125	80664130	A5SS	0.5	50	50	ENSMUST00000060987.15	ENSMUSG00000035242.16	Oaz1	chr10	protein_coding	ornithine decarboxylase antizyme 1
chr10	80671975	80679513	-	80671975	80679776	A5SS	0.5	50	50	ENSMUST00000053986.9	ENSMUSG00000051067.9	Lingo3	chr10	protein_coding	leucine rich repeat and Ig domain containing 3
chr10	80689659	80690452	-	80689663	80690452	A3SS	0.5	50	50	ENSMUST00000220225.2	ENSMUSG00000035215.10	Lsm7	chr10	protein_coding	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
chr10	80690542	80690774	-	80690542	80691015	A5SS	0.25	50	50	ENSMUST00000220225.2	ENSMUSG00000035215.10	Lsm7	chr10	protein_coding	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
chr10	80690542	80690848	-	80690542	80691015	A5SS	0.25	50	50	ENSMUST00000220225.2	ENSMUSG00000035215.10	Lsm7	chr10	protein_coding	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
chr10	80690542	80690859	-	80690542	80691015	A5SS	0.25	50	50	ENSMUST00000220225.2	ENSMUSG00000035215.10	Lsm7	chr10	protein_coding	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
chr10	80690545	80690859	-	80690542	80690859	A3SS	0.5	50	50	ENSMUST00000220406.2	ENSMUSG00000035215.10	Lsm7	chr10	protein_coding	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
chr10	80690542	80690774	-	80690542	80690859	A5SS	0.25	50	50	ENSMUST00000220406.2	ENSMUSG00000035215.10	Lsm7	chr10	protein_coding	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
chr10	80690542	80690848	-	80690542	80690859	A5SS	0.25	50	50	ENSMUST00000220406.2	ENSMUSG00000035215.10	Lsm7	chr10	protein_coding	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
chr10	80690542	80690774	-	80690542	80690848	A5SS	0.25	50	50	ENSMUST00000218119.2	ENSMUSG00000035215.10	Lsm7	chr10	protein_coding	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
chr10	80693190	80697180	+	80691222	80697180	A5SS	0.33	50	50	ENSMUST00000218007.2	ENSMUSG00000035206.11	Sppl2b	chr10	protein_coding	signal peptide peptidase like 2B
chr10	80693294	80697180	+	80691222	80697180	A5SS	0.33	50	50	ENSMUST00000218007.2	ENSMUSG00000035206.11	Sppl2b	chr10	protein_coding	signal peptide peptidase like 2B
chr10	80699385	80700955	+	80699385;80699988	80699872;80700955	ES	0.5	50	50	ENSMUST00000035597.10	ENSMUSG00000035206.11	Sppl2b	chr10	protein_coding	signal peptide peptidase like 2B
chr10	80701351	80701886	+	80701351;80701541	80701442;80701886	ES	0.5	50	50	ENSMUST00000035597.10	ENSMUSG00000035206.11	Sppl2b	chr10	protein_coding	signal peptide peptidase like 2B
chr10	80698928	80699011	+	80698928	80699014	A3SS	0.5	50	50	ENSMUST00000035597.10	ENSMUSG00000035206.11	Sppl2b	chr10	protein_coding	signal peptide peptidase like 2B
chr10	80699385	80699906	+	80699385	80699872	A3SS	0.33	50	50	ENSMUST00000035597.10	ENSMUSG00000035206.11	Sppl2b	chr10	protein_coding	signal peptide peptidase like 2B
chr10	80701351	80701886	+	80701351	80701442	A3SS	0.5	50	50	ENSMUST00000218812.2	ENSMUSG00000035206.11	Sppl2b	chr10	protein_coding	signal peptide peptidase like 2B
chr10	80693190	80697180	+	80693294	80697180	A5SS	0.33	50	50	ENSMUST00000218727.2	ENSMUSG00000035206.11	Sppl2b	chr10	protein_coding	signal peptide peptidase like 2B
chr10	80699385;80699988	80699906;80700955	+	80699385	80700955	cassetteExon	0.5	100	100	ENSMUST00000219614.2	ENSMUSG00000035206.11	Sppl2b	chr10	protein_coding	signal peptide peptidase like 2B
chr10	80736166	80736316	-	80736093	80736316	A3SS	0.5	50	50	ENSMUST00000020440.7	ENSMUSG00000020219.8	Timm13	chr10	protein_coding	translocase of inner mitochondrial membrane 13
chr10	80736384	80736503	-	80736384	80736458	A5SS	0.5	50	50	ENSMUST00000020440.7	ENSMUSG00000020219.8	Timm13	chr10	protein_coding	translocase of inner mitochondrial membrane 13
chr10	80741085	80741838	-	80741085	80742985	A5SS	0.5	50	50	ENSMUST00000057623.14	ENSMUSG00000062075.14	Lmnb2	chr10	protein_coding	lamin B2
chr10	80745879	80753340	-	80745879	80753798	A5SS	0.5	50	50	ENSMUST00000057623.14	ENSMUSG00000062075.14	Lmnb2	chr10	protein_coding	lamin B2
chr10	80833878	80850690	-	80833878	80837067	5pMXE	0.5	50	50	ENSMUST00000099462.8	ENSMUSG00000048240.15	Gng7	chr10	protein_coding	guanine nucleotide binding protein (G protein), gamma 7
chr10	80788780;80804376	80804265;80833826	-	80788780	80833826	cassetteExon	0.5	100	100	ENSMUST00000099462.8	ENSMUSG00000048240.15	Gng7	chr10	protein_coding	guanine nucleotide binding protein (G protein), gamma 7
chr10	80858304	80861415	-	80858304	80861173	5pMXE	0.5	50	50	ENSMUST00000055125.5	ENSMUSG00000043670.5	Diras1	chr10	protein_coding	DIRAS family, GTP-binding RAS-like 1
chr10	80860953	80861779	+	80860694	80861779	A5SS	0.5	50	50	ENSMUST00000151303.2	ENSMUSG00000087114.2	Gm16099	chr10	lncRNA	predicted gene 16099
chr10	80870839;80872945	80872822;80873038	-	80870839	80873038	cassetteExon	0.5	100	100	ENSMUST00000117276.11	ENSMUSG00000046822.15	Slc39a3	chr10	protein_coding	solute carrier family 39 (zinc transporter), member 3
chr10	80870843	80873038	-	80870839	80873038	A3SS	0.33	50	50	ENSMUST00000117276.11	ENSMUSG00000046822.15	Slc39a3	chr10	protein_coding	solute carrier family 39 (zinc transporter), member 3
chr10	80872945	80873038	-	80870843	80873038	A3SS	0.33	50	50	ENSMUST00000059551.7	ENSMUSG00000046822.15	Slc39a3	chr10	protein_coding	solute carrier family 39 (zinc transporter), member 3
chr10	80870839	80873038	-	80870839	80872822	A5SS	0.5	50	50	ENSMUST00000152177.2	ENSMUSG00000046822.15	Slc39a3	chr10	protein_coding	solute carrier family 39 (zinc transporter), member 3
chr10	80886917	80887057	-	80886920	80887057	A3SS	0.5	50	50	ENSMUST00000005067.6	ENSMUSG00000004937.7	Sgta	chr10	protein_coding	small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha
chr10	80888085	80895740	-	80888085	80895962	A5SS	0.33	50	50	ENSMUST00000005067.6	ENSMUSG00000004937.7	Sgta	chr10	protein_coding	small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha
chr10	80888085	80895752	-	80888085	80895962	A5SS	0.33	50	50	ENSMUST00000005067.6	ENSMUSG00000004937.7	Sgta	chr10	protein_coding	small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha
chr10	80888085	80895740	-	80888085	80895752	A5SS	0.33	50	50	ENSMUST00000219401.2	ENSMUSG00000004937.7	Sgta	chr10	protein_coding	small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha
chr10	80906112	80912777	+	80906112	80908987	3pMXE	0.5	50	50	ENSMUST00000167658.2	ENSMUSG00000004929.13	Thop1	chr10	protein_coding	thimet oligopeptidase 1
chr10	80911493	80912777	+	80906112	80912777	A5SS	0.5	50	50	ENSMUST00000171484.8	ENSMUSG00000004929.13	Thop1	chr10	protein_coding	thimet oligopeptidase 1
chr10	80928789	80934490	-	80928716	80934490	A3SS	0.5	50	50	ENSMUST00000117422.2	ENSMUSG00000035041.9	Creb3l3	chr10	protein_coding	cAMP responsive element binding protein 3-like 3
chr10	80958446	80964441	+	80958446	80959454	3pMXE	0.5	50	50	ENSMUST00000143517.8	ENSMUSG00000035027.19	Map2k2	chr10	protein_coding	mitogen-activated protein kinase kinase 2
chr10	80954063	80954811	+	80954063	80954943	A3SS	0.5	50	50	ENSMUST00000143517.8	ENSMUSG00000035027.19	Map2k2	chr10	protein_coding	mitogen-activated protein kinase kinase 2
chr10	80955537	80956880	+	80955537	80956877	A3SS	0.5	50	50	ENSMUST00000143517.8	ENSMUSG00000035027.19	Map2k2	chr10	protein_coding	mitogen-activated protein kinase kinase 2
chr10	80942207	80944582	+	80942072	80944582	A5SS	0.5	50	50	ENSMUST00000143517.8	ENSMUSG00000035027.19	Map2k2	chr10	protein_coding	mitogen-activated protein kinase kinase 2
chr10	80964543	80964815	+	80964543	80969680	A3SS	0.5	50	50	ENSMUST00000220329.2	ENSMUSG00000035027.19	Map2k2	chr10	protein_coding	mitogen-activated protein kinase kinase 2
chr10	80972493	80979796	+	80971425	80979796	A5SS	0.2	50	50	ENSMUST00000125261.2	ENSMUSG00000035011.16	Zbtb7a	chr10	protein_coding	zinc finger and BTB domain containing 7a
chr10	80972533	80979796	+	80971425	80979796	A5SS	0.2	50	50	ENSMUST00000125261.2	ENSMUSG00000035011.16	Zbtb7a	chr10	protein_coding	zinc finger and BTB domain containing 7a
chr10	80973314	80979796	+	80971425	80979796	A5SS	0.2	50	50	ENSMUST00000125261.2	ENSMUSG00000035011.16	Zbtb7a	chr10	protein_coding	zinc finger and BTB domain containing 7a
chr10	80973904	80979796	+	80971425	80979796	A5SS	0.2	50	50	ENSMUST00000125261.2	ENSMUSG00000035011.16	Zbtb7a	chr10	protein_coding	zinc finger and BTB domain containing 7a
chr10	80981051	80988532	+	80981051	80983804	3pMXE	0.5	50	50	ENSMUST00000048128.15	ENSMUSG00000035011.16	Zbtb7a	chr10	protein_coding	zinc finger and BTB domain containing 7a
chr10	80972533;80973314	80973233;80979796	+	80972533	80979796	cassetteExon	0.5	100	100	ENSMUST00000048128.15	ENSMUSG00000035011.16	Zbtb7a	chr10	protein_coding	zinc finger and BTB domain containing 7a
chr10	80972493	80979796	+	80972533	80979796	A5SS	0.2	50	50	ENSMUST00000048128.15	ENSMUSG00000035011.16	Zbtb7a	chr10	protein_coding	zinc finger and BTB domain containing 7a
chr10	80973904	80979796	+	80972533	80979796	A5SS	0.2	50	50	ENSMUST00000048128.15	ENSMUSG00000035011.16	Zbtb7a	chr10	protein_coding	zinc finger and BTB domain containing 7a
chr10	80973314	80979796	+	80972493	80979796	A5SS	0.2	50	50	ENSMUST00000119606.8	ENSMUSG00000035011.16	Zbtb7a	chr10	protein_coding	zinc finger and BTB domain containing 7a
chr10	80973904	80979796	+	80972493	80979796	A5SS	0.2	50	50	ENSMUST00000119606.8	ENSMUSG00000035011.16	Zbtb7a	chr10	protein_coding	zinc finger and BTB domain containing 7a
chr10	80973904	80979796	+	80973314	80979796	A5SS	0.25	50	50	ENSMUST00000146895.2	ENSMUSG00000035011.16	Zbtb7a	chr10	protein_coding	zinc finger and BTB domain containing 7a
chr10	80991767	80992846	-	80991740	80992846	A3SS	0.5	50	50	ENSMUST00000005064.14	ENSMUSG00000004934.15	Pias4	chr10	protein_coding	protein inhibitor of activated STAT 4
chr10	81026480	81027593	+	81026480;81026902	81026876;81027593	ES	0.5	50	50	ENSMUST00000178422.9	ENSMUSG00000034974.14	Dapk3	chr10	protein_coding	death-associated protein kinase 3
chr10	81019134	81019810	+	81018930	81019810	A5SS	0.33	50	50	ENSMUST00000178422.9	ENSMUSG00000034974.14	Dapk3	chr10	protein_coding	death-associated protein kinase 3
chr10	81019253	81019810	+	81018930	81019810	A5SS	0.33	50	50	ENSMUST00000178422.9	ENSMUSG00000034974.14	Dapk3	chr10	protein_coding	death-associated protein kinase 3
chr10	81019253	81019810	+	81019134	81019810	A5SS	0.33	50	50	ENSMUST00000219133.2	ENSMUSG00000034974.14	Dapk3	chr10	protein_coding	death-associated protein kinase 3
chr10	81026480	81027593	+	81026480	81026876	3pMXE	0.5	50	50	ENSMUST00000218157.2	ENSMUSG00000034974.14	Dapk3	chr10	protein_coding	death-associated protein kinase 3
chr10	81030556	81043687	+	81030556	81033038	3pMXE	0.5	50	50	ENSMUST00000129834.2	ENSMUSG00000085779.2	Atcayos	chr10	lncRNA	ataxia, cerebellar, Cayman type, opposite strand
chr10	81055047	81060258	-	81055066	81060258	A3SS	0.5	50	50	ENSMUST00000146030.8	ENSMUSG00000034958.12	Atcay	chr10	protein_coding	ataxia, cerebellar, Cayman type
chr10	81069076	81073191	+	81069076;81069595	81069445;81073191	ES	0.5	50	50	ENSMUST00000144087.2	ENSMUSG00000034949.19	Zfr2	chr10	protein_coding	zinc finger RNA binding protein 2
chr10	81069076	81069449	+	81069076	81069445	A3SS	0.33	50	50	ENSMUST00000144087.2	ENSMUSG00000034949.19	Zfr2	chr10	protein_coding	zinc finger RNA binding protein 2
chr10	81085630	81087086	+	81085630;81086568	81086471;81087086	ES	0.5	50	50	ENSMUST00000117798.8	ENSMUSG00000034949.19	Zfr2	chr10	protein_coding	zinc finger RNA binding protein 2
chr10	81069076;81069595	81069449;81073191	+	81069076	81073191	cassetteExon	0.5	100	100	ENSMUST00000117798.8	ENSMUSG00000034949.19	Zfr2	chr10	protein_coding	zinc finger RNA binding protein 2
chr10	81085630	81087086	+	81085630	81086471	A3SS	0.5	50	50	ENSMUST00000132174.8	ENSMUSG00000034949.19	Zfr2	chr10	protein_coding	zinc finger RNA binding protein 2
chr10	81095640	81096742	+	81095640;81096016	81095923;81096742	ES	0.5	50	50	ENSMUST00000119547.8	ENSMUSG00000004933.18	Matk	chr10	protein_coding	megakaryocyte-associated tyrosine kinase
chr10	81094373	81095008	+	81094373	81095011	A3SS	0.5	50	50	ENSMUST00000119547.8	ENSMUSG00000004933.18	Matk	chr10	protein_coding	megakaryocyte-associated tyrosine kinase
chr10	81093408	81094314	+	81089112	81094314	A5SS	0.25	50	50	ENSMUST00000119547.8	ENSMUSG00000004933.18	Matk	chr10	protein_coding	megakaryocyte-associated tyrosine kinase
chr10	81093804	81094314	+	81089112	81094314	A5SS	0.25	50	50	ENSMUST00000119547.8	ENSMUSG00000004933.18	Matk	chr10	protein_coding	megakaryocyte-associated tyrosine kinase
chr10	81094138	81094314	+	81089112	81094314	A5SS	0.25	50	50	ENSMUST00000119547.8	ENSMUSG00000004933.18	Matk	chr10	protein_coding	megakaryocyte-associated tyrosine kinase
chr10	81093408	81094314	+	81093408;81094138	81094003;81094314	ES	0.33	50	50	ENSMUST00000117488.8	ENSMUSG00000004933.18	Matk	chr10	protein_coding	megakaryocyte-associated tyrosine kinase
chr10	81093804	81094314	+	81094138	81094314	A5SS&ES	0.33	50	50	ENSMUST00000117488.8	ENSMUSG00000004933.18	Matk	chr10	protein_coding	megakaryocyte-associated tyrosine kinase
chr10	81093804	81094314	+	81093408	81094314	A5SS	0.25	50	50	ENSMUST00000105328.10	ENSMUSG00000004933.18	Matk	chr10	protein_coding	megakaryocyte-associated tyrosine kinase
chr10	81095640	81096742	+	81095640	81095923	3pMXE	0.5	50	50	ENSMUST00000126720.8	ENSMUSG00000004933.18	Matk	chr10	protein_coding	megakaryocyte-associated tyrosine kinase
chr10	81093408	81094314	+	81094138	81094314	5pMXE	0.25	50	50	ENSMUST00000151660.8	ENSMUSG00000004933.18	Matk	chr10	protein_coding	megakaryocyte-associated tyrosine kinase
chr10	81102967	81103786	+	81102967	81104008	A3SS	0.5	50	50	ENSMUST00000220297.2	ENSMUSG00000004931.12	Apba3	chr10	protein_coding	amyloid beta (A4) precursor protein-binding, family A, member 3
chr10	81104153	81104644	+	81104153	81104613	A3SS	0.33	50	50	ENSMUST00000220297.2	ENSMUSG00000004931.12	Apba3	chr10	protein_coding	amyloid beta (A4) precursor protein-binding, family A, member 3
chr10	81104153	81104692	+	81104153	81104613	A3SS	0.33	50	50	ENSMUST00000220297.2	ENSMUSG00000004931.12	Apba3	chr10	protein_coding	amyloid beta (A4) precursor protein-binding, family A, member 3
chr10	81107116	81107226	+	81107116	81107199	A3SS	0.33	50	50	ENSMUST00000220297.2	ENSMUSG00000004931.12	Apba3	chr10	protein_coding	amyloid beta (A4) precursor protein-binding, family A, member 3
chr10	81107116	81107245	+	81107116	81107199	A3SS	0.33	50	50	ENSMUST00000220297.2	ENSMUSG00000004931.12	Apba3	chr10	protein_coding	amyloid beta (A4) precursor protein-binding, family A, member 3
chr10	81104153	81104644	+	81104153	81104692	A3SS	0.33	50	50	ENSMUST00000219304.2	ENSMUSG00000004931.12	Apba3	chr10	protein_coding	amyloid beta (A4) precursor protein-binding, family A, member 3
chr10	81107116	81107226	+	81107116	81107245	A3SS	0.33	50	50	ENSMUST00000217688.2	ENSMUSG00000004931.12	Apba3	chr10	protein_coding	amyloid beta (A4) precursor protein-binding, family A, member 3
chr10	81119573	81127298	-	81119573	81126882	5pMXE	0.33	50	50	ENSMUST00000045744.7	ENSMUSG00000034917.9	Tjp3	chr10	protein_coding	tight junction protein 3
chr10	81119573	81121435	-	81119573	81126882	A5SS	0.33	50	50	ENSMUST00000045744.7	ENSMUSG00000034917.9	Tjp3	chr10	protein_coding	tight junction protein 3
chr10	81119573	81121435	-	81119573	81127298	A5SS	0.33	50	50	ENSMUST00000219479.2	ENSMUSG00000034917.9	Tjp3	chr10	protein_coding	tight junction protein 3
chr10	81149486	81150826	+	81149486;81149927	81149829;81150826	ES	0.5	50	50	ENSMUST00000163075.8	ENSMUSG00000034902.18	Pip5k1c	chr10	protein_coding	phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma
chr10	81150952;81153237	81153160;81153600	+	81150952	81153600	cassetteExon	0.5	100	100	ENSMUST00000163075.8	ENSMUSG00000034902.18	Pip5k1c	chr10	protein_coding	phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma
chr10	81140549	81140973	+	81140549	81141020	A3SS	0.5	50	50	ENSMUST00000163075.8	ENSMUSG00000034902.18	Pip5k1c	chr10	protein_coding	phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma
chr10	81150952	81151713	+	81150952	81153600	A3SS	0.25	50	50	ENSMUST00000163075.8	ENSMUSG00000034902.18	Pip5k1c	chr10	protein_coding	phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma
chr10	81150952	81152526	+	81150952	81153600	A3SS	0.25	50	50	ENSMUST00000163075.8	ENSMUSG00000034902.18	Pip5k1c	chr10	protein_coding	phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma
chr10	81141125	81141533	+	81141112	81141533	A5SS	0.5	50	50	ENSMUST00000163075.8	ENSMUSG00000034902.18	Pip5k1c	chr10	protein_coding	phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma
chr10	81148414	81148742	+	81148420	81148742	A5SS	0.5	50	50	ENSMUST00000163075.8	ENSMUSG00000034902.18	Pip5k1c	chr10	protein_coding	phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma
chr10	81150952;81151790	81151713;81153160	+	81150952	81153160	cassetteExon	0.5	100	100	ENSMUST00000105327.10	ENSMUSG00000034902.18	Pip5k1c	chr10	protein_coding	phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma
chr10	81150952;81152794	81152526;81153160	+	81150952	81153160	cassetteExon	0.5	100	100	ENSMUST00000105327.10	ENSMUSG00000034902.18	Pip5k1c	chr10	protein_coding	phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma
chr10	81150952;81152794	81152526;81153160	+	81150952;81151790	81151713;81153160	MXE	0.5	100	100	ENSMUST00000045469.15	ENSMUSG00000034902.18	Pip5k1c	chr10	protein_coding	phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma
chr10	81149486	81150826	+	81149927	81150826	5pMXE	0.5	50	50	ENSMUST00000159895.2	ENSMUSG00000034902.18	Pip5k1c	chr10	protein_coding	phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma
chr10	81150952	81153600	+	81153237	81153600	5pMXE	0.5	50	50	ENSMUST00000159636.2	ENSMUSG00000034902.18	Pip5k1c	chr10	protein_coding	phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma
chr10	81159277	81159453	+	81159100	81159453	A5SS	0.5	50	50	ENSMUST00000050867.8	ENSMUSG00000034889.9	Cactin	chr10	protein_coding	cactin, spliceosome C complex subunit
chr10	81164751;81166002	81165849;81168226	+	81164751	81168226	cassetteExon	0.5	100	100	ENSMUST00000105325.4	ENSMUSG00000034881.9	Tbxa2r	chr10	protein_coding	thromboxane A2 receptor
chr10	81183396	81183820	-	81183342	81183820	A3SS	0.5	50	50	ENSMUST00000105323.8	ENSMUSG00000020232.18	Hmg20b	chr10	protein_coding	high mobility group 20B
chr10	81185436	81185968	-	81185322	81185968	A3SS	0.5	50	50	ENSMUST00000105323.8	ENSMUSG00000020232.18	Hmg20b	chr10	protein_coding	high mobility group 20B
chr10	81185322	81185846	-	81185322	81185968	A5SS	0.5	50	50	ENSMUST00000105323.8	ENSMUSG00000020232.18	Hmg20b	chr10	protein_coding	high mobility group 20B
chr10	81186023	81186107	-	81186023	81186241	A5SS	0.5	50	50	ENSMUST00000105323.8	ENSMUSG00000020232.18	Hmg20b	chr10	protein_coding	high mobility group 20B
chr10	81193720	81195956	+	81193720	81195916	A3SS	0.5	50	50	ENSMUST00000044844.9	ENSMUSG00000034854.9	Mfsd12	chr10	protein_coding	major facilitator superfamily domain containing 12
chr10	81200070	81200376	-	81199996	81200376	A3SS	0.33	50	50	ENSMUST00000131736.8	ENSMUSG00000020234.11	4930404N11Rik	chr10	protein_coding	RIKEN cDNA 4930404N11 gene
chr10	81200099	81200376	-	81199996	81200376	A3SS	0.33	50	50	ENSMUST00000131736.8	ENSMUSG00000020234.11	4930404N11Rik	chr10	protein_coding	RIKEN cDNA 4930404N11 gene
chr10	81200099	81200376	-	81200070	81200376	A3SS	0.33	50	50	ENSMUST00000124512.2	ENSMUSG00000020234.11	4930404N11Rik	chr10	protein_coding	RIKEN cDNA 4930404N11 gene
chr10	81204430	81204908	-	81204590	81204908	A3SS	0.5	50	50	ENSMUST00000140901.8	ENSMUSG00000020235.17	Fzr1	chr10	protein_coding	fizzy and cell division cycle 20 related 1
chr10	81211454	81214104	-	81207288	81214104	A3SS	0.5	50	50	ENSMUST00000140901.8	ENSMUSG00000020235.17	Fzr1	chr10	protein_coding	fizzy and cell division cycle 20 related 1
chr10	81205870;81206381	81206032;81206531	-	81205870	81206531	cassetteExon	0.5	100	100	ENSMUST00000118812.2	ENSMUSG00000020235.17	Fzr1	chr10	protein_coding	fizzy and cell division cycle 20 related 1
chr10	81223314	81226193	+	81223314	81223541	3pMXE	0.5	50	50	ENSMUST00000072751.13	ENSMUSG00000078440.11	Dohh	chr10	protein_coding	deoxyhypusine hydroxylase/monooxygenase
chr10	81220460	81221553	+	81220412	81221553	A5SS	0.33	50	50	ENSMUST00000072751.13	ENSMUSG00000078440.11	Dohh	chr10	protein_coding	deoxyhypusine hydroxylase/monooxygenase
chr10	81220931	81221553	+	81220412	81221553	A5SS	0.33	50	50	ENSMUST00000072751.13	ENSMUSG00000078440.11	Dohh	chr10	protein_coding	deoxyhypusine hydroxylase/monooxygenase
chr10	81220931	81221553	+	81220460	81221553	A5SS	0.33	50	50	ENSMUST00000142346.8	ENSMUSG00000078440.11	Dohh	chr10	protein_coding	deoxyhypusine hydroxylase/monooxygenase
chr10	81223314;81223752	81223541;81226193	+	81223314	81226193	cassetteExon	0.5	100	100	ENSMUST00000144647.8	ENSMUSG00000113262.2	Gm48551	chr10	protein_coding	predicted gene, 48551
chr10	81224964	81226193	+	81223314	81226193	A5SS	0.33	50	50	ENSMUST00000144647.8	ENSMUSG00000113262.2	Gm48551	chr10	protein_coding	predicted gene, 48551
chr10	81224964	81226193	+	81223752	81226193	A5SS	0.33	50	50	ENSMUST00000131968.2	ENSMUSG00000113262.2	Gm48551	chr10	protein_coding	predicted gene, 48551
chr10	81229729	81229927	+	81229729	81229922	A3SS	0.5	50	50	ENSMUST00000105322.9	ENSMUSG00000078439.10	Smim24	chr10	protein_coding	small integral membrane protein 24
chr10	81240842	81243389	-	81240842;81242048	81241923;81243389	ES	0.5	50	50	ENSMUST00000105321.10	ENSMUSG00000055053.19	Nfic	chr10	protein_coding	nuclear factor I/C
chr10	81256632	81266620	-	81256632	81262910	5pMXE	0.33	50	50	ENSMUST00000105321.10	ENSMUSG00000055053.19	Nfic	chr10	protein_coding	nuclear factor I/C
chr10	81256632	81291374	-	81256632	81262910	5pMXE	0.33	50	50	ENSMUST00000105321.10	ENSMUSG00000055053.19	Nfic	chr10	protein_coding	nuclear factor I/C
chr10	81236905;81239262	81239186;81240658	-	81236905	81240658	cassetteExon	0.5	100	100	ENSMUST00000105321.10	ENSMUSG00000055053.19	Nfic	chr10	protein_coding	nuclear factor I/C
chr10	81256632	81291374	-	81256632	81266620	5pMXE	0.33	50	50	ENSMUST00000117966.2	ENSMUSG00000055053.19	Nfic	chr10	protein_coding	nuclear factor I/C
chr10	81298646	81300174	-	81298605	81300174	A3SS	0.5	50	50	ENSMUST00000118763.8	ENSMUSG00000034818.18	Celf5	chr10	protein_coding	CUGBP, Elav-like family member 5
chr10	81306591	81307143	-	81306591	81307140	A5SS	0.5	50	50	ENSMUST00000118763.8	ENSMUSG00000034818.18	Celf5	chr10	protein_coding	CUGBP, Elav-like family member 5
chr10	81307191	81308655	-	81307191	81312703	A5SS	0.25	50	50	ENSMUST00000118763.8	ENSMUSG00000034818.18	Celf5	chr10	protein_coding	CUGBP, Elav-like family member 5
chr10	81307191	81308854	-	81307191	81312703	A5SS	0.25	50	50	ENSMUST00000118763.8	ENSMUSG00000034818.18	Celf5	chr10	protein_coding	CUGBP, Elav-like family member 5
chr10	81307191	81309154	-	81307191	81312703	A5SS	0.25	50	50	ENSMUST00000118763.8	ENSMUSG00000034818.18	Celf5	chr10	protein_coding	CUGBP, Elav-like family member 5
chr10	81307191	81309154	-	81307191	81308854	5pMXE	0.25	50	50	ENSMUST00000119060.8	ENSMUSG00000034818.18	Celf5	chr10	protein_coding	CUGBP, Elav-like family member 5
chr10	81307191	81308655	-	81307191	81308854	A5SS	0.25	50	50	ENSMUST00000119060.8	ENSMUSG00000034818.18	Celf5	chr10	protein_coding	CUGBP, Elav-like family member 5
chr10	81305357	81312703	-	81305357	81306463	5pMXE	0.5	50	50	ENSMUST00000145375.8	ENSMUSG00000034818.18	Celf5	chr10	protein_coding	CUGBP, Elav-like family member 5
chr10	81307191	81308655	-	81307191	81309154	A5SS	0.25	50	50	ENSMUST00000141207.8	ENSMUSG00000034818.18	Celf5	chr10	protein_coding	CUGBP, Elav-like family member 5
chr10	81307191	81312703	-	81305357	81312703	A3SS	0.5	50	50	ENSMUST00000128494.2	ENSMUSG00000034818.18	Celf5	chr10	protein_coding	CUGBP, Elav-like family member 5
chr10	81323418	81323514	-	81323439	81323514	A3SS	0.5	50	50	ENSMUST00000020463.14	ENSMUSG00000020238.15	Ncln	chr10	protein_coding	nicalin
chr10	81324189	81324262	-	81324192	81324262	A3SS	0.5	50	50	ENSMUST00000020463.14	ENSMUSG00000020238.15	Ncln	chr10	protein_coding	nicalin
chr10	81400551	81400647	+	81400551	81400682	A3SS	0.5	50	50	ENSMUST00000002518.9	ENSMUSG00000054452.11	Tle5	chr10	protein_coding	TLE family member 5, transcriptional modulator
chr10	81401200	81401309	+	81401200	81401306	A3SS	0.5	50	50	ENSMUST00000002518.9	ENSMUSG00000054452.11	Tle5	chr10	protein_coding	TLE family member 5, transcriptional modulator
chr10	81418720;81419923	81419847;81420437	+	81418720	81420437	cassetteExon	0.5	100	100	ENSMUST00000140433.8	ENSMUSG00000034771.16	Tle2	chr10	protein_coding	transducin-like enhancer of split 2
chr10	81412133	81412363	+	81412133	81412432	A3SS	0.5	50	50	ENSMUST00000140433.8	ENSMUSG00000034771.16	Tle2	chr10	protein_coding	transducin-like enhancer of split 2
chr10	81412476	81413523	+	81412476	81413463	A3SS	0.5	50	50	ENSMUST00000140433.8	ENSMUSG00000034771.16	Tle2	chr10	protein_coding	transducin-like enhancer of split 2
chr10	81418720	81420494	+	81418720	81420437	A3SS	0.33	50	50	ENSMUST00000140433.8	ENSMUSG00000034771.16	Tle2	chr10	protein_coding	transducin-like enhancer of split 2
chr10	81422207	81422689	+	81422207	81422692	A3SS	0.5	50	50	ENSMUST00000140433.8	ENSMUSG00000034771.16	Tle2	chr10	protein_coding	transducin-like enhancer of split 2
chr10	81425330	81426187	+	81425330	81426059	A3SS	0.5	50	50	ENSMUST00000140433.8	ENSMUSG00000034771.16	Tle2	chr10	protein_coding	transducin-like enhancer of split 2
chr10	81412552	81416091	+	81413525	81416091	A5SS&ES	0.5	50	50	ENSMUST00000140433.8	ENSMUSG00000034771.16	Tle2	chr10	protein_coding	transducin-like enhancer of split 2
chr10	81422171	81422692	+	81422207	81422692	A5SS	0.5	50	50	ENSMUST00000140433.8	ENSMUSG00000034771.16	Tle2	chr10	protein_coding	transducin-like enhancer of split 2
chr10	81423591	81423708	+	81423634	81423708	A5SS	0.5	50	50	ENSMUST00000140433.8	ENSMUSG00000034771.16	Tle2	chr10	protein_coding	transducin-like enhancer of split 2
chr10	81418720	81420494	+	81418720	81419847	A3SS&ES	0.33	50	50	ENSMUST00000129798.8	ENSMUSG00000034771.16	Tle2	chr10	protein_coding	transducin-like enhancer of split 2
chr10	81416165	81416318	+	81416132	81416318	A5SS	0.5	50	50	ENSMUST00000135211.8	ENSMUSG00000034771.16	Tle2	chr10	protein_coding	transducin-like enhancer of split 2
chr10	81432089	81434445	-	81432089	81433294	5pMXE	0.33	50	50	ENSMUST00000128278.8	ENSMUSG00000034758.13	Tle6	chr10	protein_coding	transducin-like enhancer of split 6
chr10	81431209	81431314	-	81431239	81431314	A3SS	0.5	50	50	ENSMUST00000128278.8	ENSMUSG00000034758.13	Tle6	chr10	protein_coding	transducin-like enhancer of split 6
chr10	81432089	81433130	-	81432089	81433294	A5SS	0.33	50	50	ENSMUST00000128278.8	ENSMUSG00000034758.13	Tle6	chr10	protein_coding	transducin-like enhancer of split 6
chr10	81435949	81436813	-	81435949	81436632	5pMXE	0.5	50	50	ENSMUST00000142948.8	ENSMUSG00000034758.13	Tle6	chr10	protein_coding	transducin-like enhancer of split 6
chr10	81432320	81434445	-	81432089	81434445	A3SS	0.5	50	50	ENSMUST00000142948.8	ENSMUSG00000034758.13	Tle6	chr10	protein_coding	transducin-like enhancer of split 6
chr10	81432089	81433130	-	81432089	81434445	A5SS	0.33	50	50	ENSMUST00000142948.8	ENSMUSG00000034758.13	Tle6	chr10	protein_coding	transducin-like enhancer of split 6
chr10	81432320	81434445	-	81432320	81433130	5pMXE	0.5	50	50	ENSMUST00000137631.8	ENSMUSG00000034758.13	Tle6	chr10	protein_coding	transducin-like enhancer of split 6
chr10	81432089	81433130	-	81432320	81433130	A3SS	0.5	50	50	ENSMUST00000137631.8	ENSMUSG00000034758.13	Tle6	chr10	protein_coding	transducin-like enhancer of split 6
chr10	81442224	81442710	+	81442224	81450066	A3SS	0.5	50	50	ENSMUST00000126940.2	ENSMUSG00000074862.12	BC025920	chr10	protein_coding	cDNA sequence BC025920
chr10	81442891	81443973	+	81442818	81443973	A5SS	0.5	50	50	ENSMUST00000119492.2	ENSMUSG00000074862.12	BC025920	chr10	protein_coding	cDNA sequence BC025920
chr10	81442891	81443944	+	81442891	81443973	A3SS	0.5	50	50	ENSMUST00000119753.8	ENSMUSG00000074862.12	BC025920	chr10	protein_coding	cDNA sequence BC025920
chr10	81462451	81463306	-	81462451	81462726	5pMXE	0.5	50	50	ENSMUST00000119324.8	ENSMUSG00000034748.17	Sirt6	chr10	protein_coding	sirtuin 6
chr10	81464474;81464759	81464574;81465383	+	81464474	81465383	cassetteExon	0.5	100	100	ENSMUST00000123896.8	ENSMUSG00000054708.18	Ankrd24	chr10	protein_coding	ankyrin repeat domain 24
chr10	81465582;81470992	81470699;81472203	+	81465582	81472203	cassetteExon	0.5	100	100	ENSMUST00000123896.8	ENSMUSG00000054708.18	Ankrd24	chr10	protein_coding	ankyrin repeat domain 24
chr10	81471586	81472203	+	81465582	81472203	A5SS	0.33	50	50	ENSMUST00000123896.8	ENSMUSG00000054708.18	Ankrd24	chr10	protein_coding	ankyrin repeat domain 24
chr10	81470992	81472203	+	81470992;81471586	81471522;81472203	ES	0.33	50	50	ENSMUST00000119336.8	ENSMUSG00000054708.18	Ankrd24	chr10	protein_coding	ankyrin repeat domain 24
chr10	81476824	81478135	+	81476824;81477882	81477810;81478135	ES	0.5	50	50	ENSMUST00000119336.8	ENSMUSG00000054708.18	Ankrd24	chr10	protein_coding	ankyrin repeat domain 24
chr10	81479727;81480977	81480810;81482139	+	81479727	81482139	cassetteExon	0.5	100	100	ENSMUST00000119336.8	ENSMUSG00000054708.18	Ankrd24	chr10	protein_coding	ankyrin repeat domain 24
chr10	81470829	81470918	+	81470829	81470904	A3SS	0.5	50	50	ENSMUST00000119336.8	ENSMUSG00000054708.18	Ankrd24	chr10	protein_coding	ankyrin repeat domain 24
chr10	81469589	81471522	+	81470992	81471522	A5SS&ES	0.5	50	50	ENSMUST00000119336.8	ENSMUSG00000054708.18	Ankrd24	chr10	protein_coding	ankyrin repeat domain 24
chr10	81470587	81470699	+	81465582	81470699	A5SS	0.5	50	50	ENSMUST00000119336.8	ENSMUSG00000054708.18	Ankrd24	chr10	protein_coding	ankyrin repeat domain 24
chr10	81470819	81470904	+	81470829	81470904	A5SS	0.5	50	50	ENSMUST00000119336.8	ENSMUSG00000054708.18	Ankrd24	chr10	protein_coding	ankyrin repeat domain 24
chr10	81464474	81465383	+	81464759	81465383	5pMXE	0.5	50	50	ENSMUST00000129622.2	ENSMUSG00000054708.18	Ankrd24	chr10	protein_coding	ankyrin repeat domain 24
chr10	81470992	81472203	+	81470992	81471522	A3SS	0.5	50	50	ENSMUST00000123993.8	ENSMUSG00000054708.18	Ankrd24	chr10	protein_coding	ankyrin repeat domain 24
chr10	81469589;81471586	81471522;81472203	+	81469589;81470992	81470501;81472203	MXE	0.5	100	100	ENSMUST00000140345.2	ENSMUSG00000054708.18	Ankrd24	chr10	protein_coding	ankyrin repeat domain 24
chr10	81469589;81470992	81470501;81471522	+	81469589	81471522	cassetteExon	0.5	100	100	ENSMUST00000126323.2	ENSMUSG00000054708.18	Ankrd24	chr10	protein_coding	ankyrin repeat domain 24
chr10	81540734;81554450	81554303;81554753	+	81540734	81554753	cassetteExon	0.5	100	100	ENSMUST00000200889.4	ENSMUSG00000096795.5	Zfp433	chr10	protein_coding	zinc finger protein 433
chr10	81583337	81606928	-	81583337;81587767	81587632;81606928	ES	0.5	50	50	ENSMUST00000218939.2	ENSMUSG00000094622.3	Gm3055	chr10	protein_coding	predicted gene 3055
chr10	81582409;81583010	81582950;81583211	-	81582409	81583211	cassetteExon	0.5	100	100	ENSMUST00000218939.2	ENSMUSG00000094622.3	Gm3055	chr10	protein_coding	predicted gene 3055
chr10	81894330	81895351	+	81894330;81894577	81894517;81895351	ES	0.5	50	50	ENSMUST00000210325.2	ENSMUSG00000061371.8	Zfp873	chr10	protein_coding	zinc finger protein 873
chr10	82062427	82063279	-	82062427	82063365	A5SS	0.5	50	50	ENSMUST00000041264.15	ENSMUSG00000062931.16	Zfp938	chr10	protein_coding	zinc finger protein 938
chr10	82204792	82212395	+	82204792	82219597	A3SS	0.5	50	50	ENSMUST00000211099.2	ENSMUSG00000073427.5	Gm4924	chr10	protein_coding	predicted gene 4924
chr10	82239863	82257834	+	82239863;82245320	82245268;82257834	ES	0.5	50	50	ENSMUST00000210025.2	ENSMUSG00000073427.5	Gm4924	chr10	protein_coding	predicted gene 4924
chr10	82458658	82458928	-	82458658	82458799	A5SS	0.33	50	50	ENSMUST00000079648.12	ENSMUSG00000063320.12	1190007I07Rik	chr10	protein_coding	RIKEN cDNA 1190007I07 gene
chr10	82458658	82458987	-	82458658	82458799	A5SS	0.33	50	50	ENSMUST00000079648.12	ENSMUSG00000063320.12	1190007I07Rik	chr10	protein_coding	RIKEN cDNA 1190007I07 gene
chr10	82458658	82458928	-	82458658	82458987	A5SS	0.33	50	50	ENSMUST00000185168.8	ENSMUSG00000063320.12	1190007I07Rik	chr10	protein_coding	RIKEN cDNA 1190007I07 gene
chr10	82480139	82480449	+	82480139;82480367	82480285;82480449	ES	0.5	50	50	ENSMUST00000092266.11	ENSMUSG00000034674.19	Tdg	chr10	protein_coding	thymine DNA glycosylase
chr10	82480543	82483787	+	82480543;82483227	82483056;82483787	ES	0.5	50	50	ENSMUST00000092266.11	ENSMUSG00000034674.19	Tdg	chr10	protein_coding	thymine DNA glycosylase
chr10	82474710	82476252	+	82474710	82477150	A3SS	0.5	50	50	ENSMUST00000092266.11	ENSMUSG00000034674.19	Tdg	chr10	protein_coding	thymine DNA glycosylase
chr10	82483912	82484415	+	82483912	82484412	A3SS	0.5	50	50	ENSMUST00000092266.11	ENSMUSG00000034674.19	Tdg	chr10	protein_coding	thymine DNA glycosylase
chr10	82465872	82474535	+	82465773	82474535	A5SS	0.33	50	50	ENSMUST00000092266.11	ENSMUSG00000034674.19	Tdg	chr10	protein_coding	thymine DNA glycosylase
chr10	82466601	82474535	+	82465773	82474535	A5SS	0.33	50	50	ENSMUST00000092266.11	ENSMUSG00000034674.19	Tdg	chr10	protein_coding	thymine DNA glycosylase
chr10	82466601	82474535	+	82465872	82474535	A5SS	0.33	50	50	ENSMUST00000151390.8	ENSMUSG00000034674.19	Tdg	chr10	protein_coding	thymine DNA glycosylase
chr10	82480139	82480449	+	82480367	82480449	5pMXE	0.5	50	50	ENSMUST00000125970.2	ENSMUSG00000034674.19	Tdg	chr10	protein_coding	thymine DNA glycosylase
chr10	82480543	82483787	+	82480543	82483056	3pMXE	0.5	50	50	ENSMUST00000125970.2	ENSMUSG00000034674.19	Tdg	chr10	protein_coding	thymine DNA glycosylase
chr10	82480543	82483787	+	82483227	82483787	5pMXE	0.5	50	50	ENSMUST00000142658.2	ENSMUSG00000034674.19	Tdg	chr10	protein_coding	thymine DNA glycosylase
chr10	82498117	82506112	-	82498117;82500630	82500459;82506112	ES	0.5	50	50	ENSMUST00000020485.10	ENSMUSG00000020251.14	Glt8d2	chr10	protein_coding	glycosyltransferase 8 domain containing 2
chr10	82487904	82488702	-	82487352	82488702	A3SS	0.33	50	50	ENSMUST00000020485.10	ENSMUSG00000020251.14	Glt8d2	chr10	protein_coding	glycosyltransferase 8 domain containing 2
chr10	82488582	82488702	-	82487352	82488702	A3SS	0.33	50	50	ENSMUST00000020485.10	ENSMUSG00000020251.14	Glt8d2	chr10	protein_coding	glycosyltransferase 8 domain containing 2
chr10	82488582	82488702	-	82487904	82488702	A3SS	0.33	50	50	ENSMUST00000150269.8	ENSMUSG00000020251.14	Glt8d2	chr10	protein_coding	glycosyltransferase 8 domain containing 2
chr10	82498117	82506112	-	82500630	82506112	3pMXE	0.5	50	50	ENSMUST00000155529.2	ENSMUSG00000020251.14	Glt8d2	chr10	protein_coding	glycosyltransferase 8 domain containing 2
chr10	82538437	82545798	+	82538437	82544843	3pMXE	0.5	50	50	ENSMUST00000160845.2	ENSMUSG00000020246.14	Hcfc2	chr10	protein_coding	host cell factor C2
chr10	82535140	82536753	+	82532041	82536753	A5SS	0.5	50	50	ENSMUST00000160845.2	ENSMUSG00000020246.14	Hcfc2	chr10	protein_coding	host cell factor C2
chr10	82538437	82545798	+	82538437;82545051	82544843;82545798	ES	0.5	50	50	ENSMUST00000020478.14	ENSMUSG00000020246.14	Hcfc2	chr10	protein_coding	host cell factor C2
chr10	82588438	82592536	-	82588438;82590929	82590799;82592536	ES	0.5	50	50	ENSMUST00000130911.8	ENSMUSG00000020248.19	Nfyb	chr10	protein_coding	nuclear transcription factor-Y beta
chr10	82597747	82599293	-	82597747	82599838	A5SS	0.5	50	50	ENSMUST00000130911.8	ENSMUSG00000020248.19	Nfyb	chr10	protein_coding	nuclear transcription factor-Y beta
chr10	82588438	82592536	-	82590929	82592536	3pMXE	0.5	50	50	ENSMUST00000128397.2	ENSMUSG00000020248.19	Nfyb	chr10	protein_coding	nuclear transcription factor-Y beta
chr10	82695134	82710447	+	82709109	82710447	A5SS&ES	0.33	50	50	ENSMUST00000219368.3	ENSMUSG00000020250.12	Txnrd1	chr10	protein_coding	thioredoxin reductase 1
chr10	82695134	82713100	+	82711530	82713100	A5SS&ES	0.5	50	50	ENSMUST00000219368.3	ENSMUSG00000020250.12	Txnrd1	chr10	protein_coding	thioredoxin reductase 1
chr10	82696464	82710447	+	82709109	82710447	A5SS&ES	0.33	50	50	ENSMUST00000219368.3	ENSMUSG00000020250.12	Txnrd1	chr10	protein_coding	thioredoxin reductase 1
chr10	82695134;82696464	82696358;82710447	+	82695134	82710447	cassetteExon	0.5	100	100	ENSMUST00000020484.9	ENSMUSG00000020250.12	Txnrd1	chr10	protein_coding	thioredoxin reductase 1
chr10	82695134	82710447	+	82695134	82696358	3pMXE	0.33	50	50	ENSMUST00000218082.2	ENSMUSG00000020250.12	Txnrd1	chr10	protein_coding	thioredoxin reductase 1
chr10	82695134	82713100	+	82695134	82696358	3pMXE	0.33	50	50	ENSMUST00000218082.2	ENSMUSG00000020250.12	Txnrd1	chr10	protein_coding	thioredoxin reductase 1
chr10	82695134	82710447	+	82695134	82713100	A3SS	0.33	50	50	ENSMUST00000218694.2	ENSMUSG00000020250.12	Txnrd1	chr10	protein_coding	thioredoxin reductase 1
chr10	82695134	82710447	+	82696464	82710447	5pMXE	0.33	50	50	ENSMUST00000219442.3	ENSMUSG00000020250.12	Txnrd1	chr10	protein_coding	thioredoxin reductase 1
chr10	83152653	83158703	-	83152653	83173624	A5SS	0.25	50	50	ENSMUST00000039956.6	ENSMUSG00000034591.6	Slc41a2	chr10	protein_coding	solute carrier family 41, member 2
chr10	83152653	83171066	-	83152653	83173624	A5SS	0.25	50	50	ENSMUST00000039956.6	ENSMUSG00000034591.6	Slc41a2	chr10	protein_coding	solute carrier family 41, member 2
chr10	83152653	83173090	-	83152653	83173624	A5SS	0.25	50	50	ENSMUST00000039956.6	ENSMUSG00000034591.6	Slc41a2	chr10	protein_coding	solute carrier family 41, member 2
chr10	83152653	83171066	-	83152653	83158703	5pMXE	0.25	50	50	ENSMUST00000154926.2	ENSMUSG00000034591.6	Slc41a2	chr10	protein_coding	solute carrier family 41, member 2
chr10	83152653	83173090	-	83152653	83158703	5pMXE	0.25	50	50	ENSMUST00000154926.2	ENSMUSG00000034591.6	Slc41a2	chr10	protein_coding	solute carrier family 41, member 2
chr10	83152653	83171066	-	83152653	83173090	A5SS	0.25	50	50	ENSMUST00000126617.2	ENSMUSG00000034591.6	Slc41a2	chr10	protein_coding	solute carrier family 41, member 2
chr10	83331898	83335703	-	83331898;83333434	83333336;83335703	ES	0.5	50	50	ENSMUST00000020497.14	ENSMUSG00000020256.15	Aldh1l2	chr10	protein_coding	aldehyde dehydrogenase 1 family, member L2
chr10	83344006	83348154	-	83344006;83344596	83344477;83348154	ES	0.5	50	50	ENSMUST00000020497.14	ENSMUSG00000020256.15	Aldh1l2	chr10	protein_coding	aldehyde dehydrogenase 1 family, member L2
chr10	83331955	83333336	-	83331898	83333336	A3SS	0.5	50	50	ENSMUST00000020497.14	ENSMUSG00000020256.15	Aldh1l2	chr10	protein_coding	aldehyde dehydrogenase 1 family, member L2
chr10	83363313	83369196	-	83363313	83369831	A5SS	0.5	50	50	ENSMUST00000020497.14	ENSMUSG00000020256.15	Aldh1l2	chr10	protein_coding	aldehyde dehydrogenase 1 family, member L2
chr10	83386173	83386745	+	83386173	83386751	A3SS	0.5	50	50	ENSMUST00000217842.2	ENSMUSG00000034560.7	Washc4	chr10	protein_coding	WASH complex subunit 4
chr10	83391479	83391877	+	83391479	83391865	A3SS	0.5	50	50	ENSMUST00000217842.2	ENSMUSG00000034560.7	Washc4	chr10	protein_coding	WASH complex subunit 4
chr10	83441798	83444801	-	83441798;83444616	83444564;83444801	ES	0.5	50	50	ENSMUST00000020500.14	ENSMUSG00000020263.15	Appl2	chr10	protein_coding	adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2
chr10	83464164	83476870	-	83464164;83464697	83464638;83476870	ES	0.5	50	50	ENSMUST00000020500.14	ENSMUSG00000020263.15	Appl2	chr10	protein_coding	adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2
chr10	83460570;83463334	83463189;83464093	-	83460570	83464093	cassetteExon	0.5	100	100	ENSMUST00000020500.14	ENSMUSG00000020263.15	Appl2	chr10	protein_coding	adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2
chr10	83436691	83437747	-	83436905	83437747	A3SS	0.5	50	50	ENSMUST00000020500.14	ENSMUSG00000020263.15	Appl2	chr10	protein_coding	adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2
chr10	83450159	83453211	-	83450166	83453211	A3SS	0.5	50	50	ENSMUST00000020500.14	ENSMUSG00000020263.15	Appl2	chr10	protein_coding	adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2
chr10	83457614	83460483	-	83457617	83460483	A3SS	0.5	50	50	ENSMUST00000020500.14	ENSMUSG00000020263.15	Appl2	chr10	protein_coding	adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2
chr10	83464697	83471949	-	83464697	83476870	A5SS	0.5	50	50	ENSMUST00000020500.14	ENSMUSG00000020263.15	Appl2	chr10	protein_coding	adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2
chr10	83594077	83595462	+	83594077	83595457	A3SS	0.5	50	50	ENSMUST00000150459.3	ENSMUSG00000087651.4	1500009L16Rik	chr10	protein_coding	RIKEN cDNA 1500009L16 gene
chr10	84491943;84494086	84493989;84503186	+	84491943	84503186	cassetteExon	0.5	100	100	ENSMUST00000077175.7	ENSMUSG00000034453.9	Polr3b	chr10	protein_coding	polymerase (RNA) III (DNA directed) polypeptide B
chr10	84475032	84475606	+	84474036	84475606	A5SS	0.5	50	50	ENSMUST00000077175.7	ENSMUSG00000034453.9	Polr3b	chr10	protein_coding	polymerase (RNA) III (DNA directed) polypeptide B
chr10	84704826	84707983	+	84704826	84716034	A3SS	0.5	50	50	ENSMUST00000060397.13	ENSMUSG00000020037.16	Rfx4	chr10	protein_coding	regulatory factor X, 4 (influences HLA class II expression)
chr10	84598188	84615879	+	84592377	84615879	A5SS	0.33	50	50	ENSMUST00000060397.13	ENSMUSG00000020037.16	Rfx4	chr10	protein_coding	regulatory factor X, 4 (influences HLA class II expression)
chr10	84598249	84615879	+	84592377	84615879	A5SS	0.33	50	50	ENSMUST00000060397.13	ENSMUSG00000020037.16	Rfx4	chr10	protein_coding	regulatory factor X, 4 (influences HLA class II expression)
chr10	84670741	84671157	+	84650623	84671157	A5SS	0.5	50	50	ENSMUST00000060397.13	ENSMUSG00000020037.16	Rfx4	chr10	protein_coding	regulatory factor X, 4 (influences HLA class II expression)
chr10	84674143	84675881	+	84671218	84675881	A5SS	0.5	50	50	ENSMUST00000060397.13	ENSMUSG00000020037.16	Rfx4	chr10	protein_coding	regulatory factor X, 4 (influences HLA class II expression)
chr10	84598188	84615879	+	84598249	84615879	A5SS	0.33	50	50	ENSMUST00000173479.2	ENSMUSG00000020037.16	Rfx4	chr10	protein_coding	regulatory factor X, 4 (influences HLA class II expression)
chr10	84761457	84793880	+	84761457;84783884	84783276;84793880	ES	0.5	50	50	ENSMUST00000038523.15	ENSMUSG00000035620.16	Ric8b	chr10	protein_coding	RIC8 guanine nucleotide exchange factor B
chr10	84828128	84850940	+	84828128;84837765	84837646;84850940	ES	0.33	50	50	ENSMUST00000038523.15	ENSMUSG00000035620.16	Ric8b	chr10	protein_coding	RIC8 guanine nucleotide exchange factor B
chr10	84773315	84783276	+	84761457	84783276	A5SS	0.5	50	50	ENSMUST00000038523.15	ENSMUSG00000035620.16	Ric8b	chr10	protein_coding	RIC8 guanine nucleotide exchange factor B
chr10	84845491	84850940	+	84837765	84850940	A5SS	0.33	50	50	ENSMUST00000038523.15	ENSMUSG00000035620.16	Ric8b	chr10	protein_coding	RIC8 guanine nucleotide exchange factor B
chr10	84761457	84783276	+	84761457	84793880	A3SS	0.5	50	50	ENSMUST00000214693.2	ENSMUSG00000035620.16	Ric8b	chr10	protein_coding	RIC8 guanine nucleotide exchange factor B
chr10	84783884	84793880	+	84761457	84793880	A5SS	0.5	50	50	ENSMUST00000214693.2	ENSMUSG00000035620.16	Ric8b	chr10	protein_coding	RIC8 guanine nucleotide exchange factor B
chr10	84845491	84850940	+	84828128	84850940	A5SS	0.33	50	50	ENSMUST00000095385.5	ENSMUSG00000035620.16	Ric8b	chr10	protein_coding	RIC8 guanine nucleotide exchange factor B
chr10	84935352	84938008	-	84935352	84938160	A5SS	0.5	50	50	ENSMUST00000059383.8	ENSMUSG00000050035.8	Fhl4	chr10	protein_coding	four and a half LIM domains 4
chr10	84962350;84963072	84962979;84963826	-	84962350	84963826	cassetteExon	0.5	100	100	ENSMUST00000050813.4	ENSMUSG00000049038.4	Mterf2	chr10	protein_coding	mitochondrial transcription termination factor 2
chr10	84962329	84963826	-	84962350	84963826	A3SS	0.33	50	50	ENSMUST00000050813.4	ENSMUSG00000049038.4	Mterf2	chr10	protein_coding	mitochondrial transcription termination factor 2
chr10	84962329	84963826	-	84963072	84963826	A3SS&ES	0.33	50	50	ENSMUST00000217027.2	ENSMUSG00000049038.4	Mterf2	chr10	protein_coding	mitochondrial transcription termination factor 2
chr10	84984662	84987092	-	84984662	84987077	A5SS	0.5	50	50	ENSMUST00000020227.11	ENSMUSG00000020038.11	Cry1	chr10	protein_coding	cryptochrome 1 (photolyase-like)
chr10	85079812	85102013	-	85067835	85102013	A3SS	0.5	50	50	ENSMUST00000215824.2	ENSMUSG00000111752.2	Gm38575	chr10	lncRNA	predicted gene, 38575
chr10	85434741	85441674	+	85434741	85460767	A3SS	0.5	50	50	ENSMUST00000105307.8	ENSMUSG00000020042.16	Btbd11	chr10	protein_coding	BTB (POZ) domain containing 11
chr10	85434441	85434589	+	85397573	85434589	A5SS	0.5	50	50	ENSMUST00000105307.8	ENSMUSG00000020042.16	Btbd11	chr10	protein_coding	BTB (POZ) domain containing 11
chr10	85476058	85476367	+	85469726	85476367	A5SS	0.5	50	50	ENSMUST00000105307.8	ENSMUSG00000020042.16	Btbd11	chr10	protein_coding	BTB (POZ) domain containing 11
chr10	85467045	85467157	+	85467045	85469548	A3SS	0.5	50	50	ENSMUST00000020231.10	ENSMUSG00000020042.16	Btbd11	chr10	protein_coding	BTB (POZ) domain containing 11
chr10	85468173	85469548	+	85467045	85469548	A5SS	0.5	50	50	ENSMUST00000020231.10	ENSMUSG00000020042.16	Btbd11	chr10	protein_coding	BTB (POZ) domain containing 11
chr10	85665713	85669070	+	85665713	85710142	A3SS	0.5	50	50	ENSMUST00000217667.2	ENSMUSG00000001785.14	Pwp1	chr10	protein_coding	PWP1 homolog, endonuclein
chr10	85707878	85710142	+	85665713	85710142	A5SS	0.5	50	50	ENSMUST00000217667.2	ENSMUSG00000001785.14	Pwp1	chr10	protein_coding	PWP1 homolog, endonuclein
chr10	85710497	85712162	+	85710459	85712162	A5SS	0.5	50	50	ENSMUST00000217667.2	ENSMUSG00000001785.14	Pwp1	chr10	protein_coding	PWP1 homolog, endonuclein
chr10	85743934;85744223	85744160;85746087	-	85743934	85746087	cassetteExon	0.5	100	100	ENSMUST00000220032.2	ENSMUSG00000035529.11	Prdm4	chr10	protein_coding	PR domain containing 4
chr10	85740113	85741213	-	85740134	85741213	A3SS	0.5	50	50	ENSMUST00000220032.2	ENSMUSG00000035529.11	Prdm4	chr10	protein_coding	PR domain containing 4
chr10	85752593	85752839	-	85752593	85752672	A5SS	0.5	50	50	ENSMUST00000220032.2	ENSMUSG00000035529.11	Prdm4	chr10	protein_coding	PR domain containing 4
chr10	85836503;85845296	85845207;85847649	-	85836503	85847649	cassetteExon	0.5	100	100	ENSMUST00000061699.12	ENSMUSG00000050108.13	Bpifc	chr10	protein_coding	BPI fold containing family C
chr10	85858008	85864873	+	85858008;85860574	85860280;85864873	ES	0.5	50	50	ENSMUST00000130320.8	ENSMUSG00000001786.15	Fbxo7	chr10	protein_coding	F-box protein 7
chr10	85858008	85860432	+	85858008	85860280	A3SS	0.33	50	50	ENSMUST00000130320.8	ENSMUSG00000001786.15	Fbxo7	chr10	protein_coding	F-box protein 7
chr10	85858194	85860280	+	85858008	85860280	A5SS	0.5	50	50	ENSMUST00000130320.8	ENSMUSG00000001786.15	Fbxo7	chr10	protein_coding	F-box protein 7
chr10	85869014	85869098	+	85866933	85869098	A5SS	0.5	50	50	ENSMUST00000130320.8	ENSMUSG00000001786.15	Fbxo7	chr10	protein_coding	F-box protein 7
chr10	85858008;85860574	85860432;85864873	+	85858008	85864873	cassetteExon	0.5	100	100	ENSMUST00000001837.14	ENSMUSG00000001786.15	Fbxo7	chr10	protein_coding	F-box protein 7
chr10	85858194	85860432	+	85858008	85860432	A5SS	0.5	50	50	ENSMUST00000147168.2	ENSMUSG00000001786.15	Fbxo7	chr10	protein_coding	F-box protein 7
chr10	85858194	85860280	+	85858194	85860432	A3SS	0.5	50	50	ENSMUST00000120344.8	ENSMUSG00000001786.15	Fbxo7	chr10	protein_coding	F-box protein 7
chr10	86303299;86313604	86313530;86334654	-	86303299	86334654	cassetteExon	0.5	100	100	ENSMUST00000120638.8	ENSMUSG00000059602.15	Syn3	chr10	protein_coding	synapsin III
chr10	86130515	86187415	-	85970912	86187415	A3SS	0.5	50	50	ENSMUST00000120638.8	ENSMUSG00000059602.15	Syn3	chr10	protein_coding	synapsin III
chr10	85900794	85902605	-	85900794	85904890	A5SS	0.5	50	50	ENSMUST00000120638.8	ENSMUSG00000059602.15	Syn3	chr10	protein_coding	synapsin III
chr10	86303299	86327618	-	86303299	86334654	A5SS	0.33	50	50	ENSMUST00000120638.8	ENSMUSG00000059602.15	Syn3	chr10	protein_coding	synapsin III
chr10	86303299	86313530	-	86303299	86327618	A5SS	0.33	50	50	ENSMUST00000145864.8	ENSMUSG00000059602.15	Syn3	chr10	protein_coding	synapsin III
chr10	86136838	86139699	+	86136838	86174237	A3SS	0.33	50	50	ENSMUST00000020234.14	ENSMUSG00000020044.14	Timp3	chr10	protein_coding	tissue inhibitor of metalloproteinase 3
chr10	86136838	86162444	+	86136838	86174237	A3SS	0.33	50	50	ENSMUST00000020234.14	ENSMUSG00000020044.14	Timp3	chr10	protein_coding	tissue inhibitor of metalloproteinase 3
chr10	86138937	86174237	+	86136838	86174237	A5SS	0.5	50	50	ENSMUST00000020234.14	ENSMUSG00000020044.14	Timp3	chr10	protein_coding	tissue inhibitor of metalloproteinase 3
chr10	86136838	86162444	+	86136838	86139699	3pMXE	0.33	50	50	ENSMUST00000151134.2	ENSMUSG00000020044.14	Timp3	chr10	protein_coding	tissue inhibitor of metalloproteinase 3
chr10	86521860	86528082	+	86521860	86524398	3pMXE	0.5	50	50	ENSMUST00000218095.2	ENSMUSG00000097412.3	1810014B01Rik	chr10	transcribed_unprocessed_pseudogene	RIKEN cDNA 1810014B01 gene
chr10	86521601	86521744	+	86521472	86521744	A5SS	0.5	50	50	ENSMUST00000218095.2	ENSMUSG00000097412.3	1810014B01Rik	chr10	transcribed_unprocessed_pseudogene	RIKEN cDNA 1810014B01 gene
chr10	86525002	86528082	+	86521860	86528082	A5SS	0.5	50	50	ENSMUST00000218691.2	ENSMUSG00000097412.3	1810014B01Rik	chr10	transcribed_unprocessed_pseudogene	RIKEN cDNA 1810014B01 gene
chr10	86521860	86528082	+	86521860;86525002	86524398;86528082	ES	0.5	50	50	ENSMUST00000181587.2	ENSMUSG00000097412.3	1810014B01Rik	chr10	transcribed_unprocessed_pseudogene	RIKEN cDNA 1810014B01 gene
chr10	86531827	86534183	-	86531827;86532699	86532583;86534183	ES	0.5	50	50	ENSMUST00000129178.8	ENSMUSG00000020048.14	Hsp90b1	chr10	protein_coding	heat shock protein 90, beta (Grp94), member 1
chr10	86572863	86586111	+	86572863;86580468	86580290;86586111	ES	0.5	50	50	ENSMUST00000075632.14	ENSMUSG00000044937.16	Ttc41	chr10	protein_coding	tetratricopeptide repeat domain 41
chr10	86541881;86543208	86543100;86548629	+	86541881	86548629	cassetteExon	0.5	100	100	ENSMUST00000075632.14	ENSMUSG00000044937.16	Ttc41	chr10	protein_coding	tetratricopeptide repeat domain 41
chr10	86544511	86548629	+	86541881	86548629	A5SS	0.33	50	50	ENSMUST00000075632.14	ENSMUSG00000044937.16	Ttc41	chr10	protein_coding	tetratricopeptide repeat domain 41
chr10	86589517	86594122	+	86586250	86594122	A5SS	0.5	50	50	ENSMUST00000075632.14	ENSMUSG00000044937.16	Ttc41	chr10	protein_coding	tetratricopeptide repeat domain 41
chr10	86595040	86596630	+	86595100	86596630	A5SS	0.5	50	50	ENSMUST00000075632.14	ENSMUSG00000044937.16	Ttc41	chr10	protein_coding	tetratricopeptide repeat domain 41
chr10	86543208	86548629	+	86543208;86544511	86544427;86548629	ES	0.33	50	50	ENSMUST00000217747.2	ENSMUSG00000044937.16	Ttc41	chr10	protein_coding	tetratricopeptide repeat domain 41
chr10	86599861	86611794	+	86599861	86640645	A3SS	0.5	50	50	ENSMUST00000218802.2	ENSMUSG00000112743.2	Gm49358	chr10	protein_coding	predicted gene, 49358
chr10	86615175	86640645	+	86599861	86640645	A5SS	0.5	50	50	ENSMUST00000218802.2	ENSMUSG00000112743.2	Gm49358	chr10	protein_coding	predicted gene, 49358
chr10	86684917	86686642	-	86684917;86686527	86686421;86686642	ES	0.5	50	50	ENSMUST00000035288.17	ENSMUSG00000035459.19	Stab2	chr10	protein_coding	stabilin 2
chr10	86692606	86693972	-	86692603	86693972	A3SS	0.5	50	50	ENSMUST00000035288.17	ENSMUSG00000035459.19	Stab2	chr10	protein_coding	stabilin 2
chr10	86754733	86754880	-	86743295	86754880	A3SS	0.5	50	50	ENSMUST00000035288.17	ENSMUSG00000035459.19	Stab2	chr10	protein_coding	stabilin 2
chr10	86826729	86832669	-	86817040	86832669	A3SS	0.33	50	50	ENSMUST00000035288.17	ENSMUSG00000035459.19	Stab2	chr10	protein_coding	stabilin 2
chr10	86828599	86832669	-	86817040	86832669	A3SS	0.33	50	50	ENSMUST00000035288.17	ENSMUSG00000035459.19	Stab2	chr10	protein_coding	stabilin 2
chr10	86828599	86832669	-	86826729	86832669	A3SS	0.33	50	50	ENSMUST00000219280.2	ENSMUSG00000035459.19	Stab2	chr10	protein_coding	stabilin 2
chr10	87000996;87062098	87061739;87065868	+	87000996	87065868	cassetteExon	0.5	100	100	ENSMUST00000189456.7	ENSMUSG00000047129.12	1700113H08Rik	chr10	protein_coding	RIKEN cDNA 1700113H08 gene
chr10	87042056	87065868	+	87000996	87065868	A5SS	0.33	50	50	ENSMUST00000189456.7	ENSMUSG00000047129.12	1700113H08Rik	chr10	protein_coding	RIKEN cDNA 1700113H08 gene
chr10	87042056	87065868	+	87062098	87065868	A5SS&ES	0.33	50	50	ENSMUST00000169849.3	ENSMUSG00000047129.12	1700113H08Rik	chr10	protein_coding	RIKEN cDNA 1700113H08 gene
chr10	87066845	87071517	+	87066845	87100977	A3SS	0.5	50	50	ENSMUST00000218226.2	ENSMUSG00000112213.2	4930555G07Rik	chr10	lncRNA	RIKEN cDNA 4930555G07 gene
chr10	87382593	87390208	+	87374187	87390208	A5SS	0.5	50	50	ENSMUST00000020241.17	ENSMUSG00000020051.18	Pah	chr10	protein_coding	phenylalanine hydroxylase
chr10	87374102	87417777	+	87364250	87417777	A5SS	0.5	50	50	ENSMUST00000219813.2	ENSMUSG00000020051.18	Pah	chr10	protein_coding	phenylalanine hydroxylase
chr10	87749662;87751211	87751160;87766537	+	87749662	87766537	cassetteExon	0.5	100	100	ENSMUST00000122386.8	ENSMUSG00000020053.19	Igf1	chr10	protein_coding	insulin-like growth factor 1
chr10	87697247	87700593	+	87695274	87700593	A5SS	0.5	50	50	ENSMUST00000122386.8	ENSMUSG00000020053.19	Igf1	chr10	protein_coding	insulin-like growth factor 1
chr10	87749662	87766537	+	87749662	87751160	3pMXE	0.5	50	50	ENSMUST00000126490.8	ENSMUSG00000020053.19	Igf1	chr10	protein_coding	insulin-like growth factor 1
chr10	87979957	87982714	-	87979957	87982358	A5SS	0.5	50	50	ENSMUST00000048518.16	ENSMUSG00000035365.16	Parpbp	chr10	protein_coding	PARP1 binding protein
chr10	87979957;87982440	87982358;87982714	-	87979957	87982714	cassetteExon	0.5	100	100	ENSMUST00000164121.8	ENSMUSG00000035365.16	Parpbp	chr10	protein_coding	PARP1 binding protein
chr10	87979957;87982510	87982358;87982714	-	87979957	87982714	cassetteExon	0.5	100	100	ENSMUST00000164121.8	ENSMUSG00000035365.16	Parpbp	chr10	protein_coding	PARP1 binding protein
chr10	87982440	87982714	-	87982510	87982714	A3SS	0.33	50	50	ENSMUST00000168163.8	ENSMUSG00000035365.16	Parpbp	chr10	protein_coding	PARP1 binding protein
chr10	88010795	88013996	+	88010795;88013028	88012935;88013996	ES	0.5	50	50	ENSMUST00000052355.15	ENSMUSG00000035351.17	Nup37	chr10	protein_coding	nucleoporin 37
chr10	87983031	87984024	+	87982934	87984024	A5SS	0.5	50	50	ENSMUST00000052355.15	ENSMUSG00000035351.17	Nup37	chr10	protein_coding	nucleoporin 37
chr10	88010795	88013996	+	88010795	88012935	3pMXE	0.5	50	50	ENSMUST00000219059.2	ENSMUSG00000035351.17	Nup37	chr10	protein_coding	nucleoporin 37
chr10	88037772;88049153	88049041;88049509	+	88037772	88049509	cassetteExon	0.5	100	100	ENSMUST00000020248.16	ENSMUSG00000020056.17	Washc3	chr10	protein_coding	WASH complex subunit 3
chr10	88049574	88051845	+	88049574	88051829	A3SS	0.5	50	50	ENSMUST00000020248.16	ENSMUSG00000020056.17	Washc3	chr10	protein_coding	WASH complex subunit 3
chr10	88051936	88055115	+	88051936	88055112	A3SS	0.5	50	50	ENSMUST00000020248.16	ENSMUSG00000020056.17	Washc3	chr10	protein_coding	WASH complex subunit 3
chr10	88055222	88060894	+	88055222	88070256	A3SS	0.5	50	50	ENSMUST00000020248.16	ENSMUSG00000020056.17	Washc3	chr10	protein_coding	WASH complex subunit 3
chr10	88070320	88070416	+	88070320	88081618	A3SS	0.5	50	50	ENSMUST00000020248.16	ENSMUSG00000020056.17	Washc3	chr10	protein_coding	WASH complex subunit 3
chr10	88040605	88049509	+	88037772	88049509	A5SS	0.33	50	50	ENSMUST00000020248.16	ENSMUSG00000020056.17	Washc3	chr10	protein_coding	WASH complex subunit 3
chr10	88071451	88081618	+	88070320	88081618	A5SS	0.5	50	50	ENSMUST00000020248.16	ENSMUSG00000020056.17	Washc3	chr10	protein_coding	WASH complex subunit 3
chr10	88040605	88049509	+	88049153	88049509	A5SS&ES	0.33	50	50	ENSMUST00000182299.8	ENSMUSG00000020056.17	Washc3	chr10	protein_coding	WASH complex subunit 3
chr10	88180573	88195241	-	88180573	88192620	5pMXE	0.33	50	50	ENSMUST00000156097.2	ENSMUSG00000020057.3	Dram1	chr10	protein_coding	DNA-damage regulated autophagy modulator 1
chr10	88180573	88192654	-	88180573	88192620	A5SS	0.33	50	50	ENSMUST00000156097.2	ENSMUSG00000020057.3	Dram1	chr10	protein_coding	DNA-damage regulated autophagy modulator 1
chr10	88180573	88195241	-	88180573	88192654	5pMXE	0.33	50	50	ENSMUST00000020249.2	ENSMUSG00000020057.3	Dram1	chr10	protein_coding	DNA-damage regulated autophagy modulator 1
chr10	88215397	88247778	+	88215397;88236599	88236514;88247778	ES	0.5	50	50	ENSMUST00000127615.8	ENSMUSG00000035311.17	Gnptab	chr10	protein_coding	N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
chr10	88215176	88215331	+	88215158	88215331	A5SS	0.5	50	50	ENSMUST00000127615.8	ENSMUSG00000035311.17	Gnptab	chr10	protein_coding	N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
chr10	88268506	88268999	+	88268506	88268911	A3SS	0.5	50	50	ENSMUST00000151273.8	ENSMUSG00000035311.17	Gnptab	chr10	protein_coding	N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
chr10	88276253	88276484	+	88276253	88279171	A3SS	0.5	50	50	ENSMUST00000151273.8	ENSMUSG00000035311.17	Gnptab	chr10	protein_coding	N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
chr10	88281153	88281729	-	88280315	88281729	A3SS	0.5	50	50	ENSMUST00000146132.2	ENSMUSG00000087429.2	Gm16235	chr10	lncRNA	predicted gene 16235
chr10	88288959	88311288	-	88288959;88307322	88307250;88311288	ES	0.33	50	50	ENSMUST00000148899.8	ENSMUSG00000060002.15	Chpt1	chr10	protein_coding	choline phosphotransferase 1
chr10	88308846	88311288	-	88307322	88311288	A3SS	0.33	50	50	ENSMUST00000148899.8	ENSMUSG00000060002.15	Chpt1	chr10	protein_coding	choline phosphotransferase 1
chr10	88308846	88311288	-	88288959	88311288	A3SS	0.33	50	50	ENSMUST00000134318.8	ENSMUSG00000060002.15	Chpt1	chr10	protein_coding	choline phosphotransferase 1
chr10	88316808;88317241	88317215;88318093	-	88316808	88318093	cassetteExon	0.5	100	100	ENSMUST00000117440.8	ENSMUSG00000060002.15	Chpt1	chr10	protein_coding	choline phosphotransferase 1
chr10	88321873	88324244	-	88318177	88324244	A3SS	0.33	50	50	ENSMUST00000117440.8	ENSMUSG00000060002.15	Chpt1	chr10	protein_coding	choline phosphotransferase 1
chr10	88323124	88324244	-	88318177	88324244	A3SS	0.33	50	50	ENSMUST00000117440.8	ENSMUSG00000060002.15	Chpt1	chr10	protein_coding	choline phosphotransferase 1
chr10	88308846	88311195	-	88308846	88311288	A5SS	0.5	50	50	ENSMUST00000117440.8	ENSMUSG00000060002.15	Chpt1	chr10	protein_coding	choline phosphotransferase 1
chr10	88323124	88324244	-	88321873	88324244	A3SS	0.33	50	50	ENSMUST00000117579.8	ENSMUSG00000060002.15	Chpt1	chr10	protein_coding	choline phosphotransferase 1
chr10	88299732	88303145	+	88299732;88302418	88302301;88303145	ES	0.5	50	50	ENSMUST00000020252.10	ENSMUSG00000020059.10	Sycp3	chr10	protein_coding	synaptonemal complex protein 3
chr10	88354431	88358829	-	88354431;88355805	88355763;88358829	ES	0.25	50	50	ENSMUST00000121629.8	ENSMUSG00000020061.19	Mybpc1	chr10	protein_coding	myosin binding protein C, slow-type
chr10	88409391	88421522	-	88409391;88417910	88417869;88421522	ES	0.5	50	50	ENSMUST00000121629.8	ENSMUSG00000020061.19	Mybpc1	chr10	protein_coding	myosin binding protein C, slow-type
chr10	88355805;88357197	88357139;88358829	-	88355805	88358829	cassetteExon	0.5	100	100	ENSMUST00000121629.8	ENSMUSG00000020061.19	Mybpc1	chr10	protein_coding	myosin binding protein C, slow-type
chr10	88372344;88373381	88373328;88376811	-	88372344	88376811	cassetteExon	0.5	100	100	ENSMUST00000121629.8	ENSMUSG00000020061.19	Mybpc1	chr10	protein_coding	myosin binding protein C, slow-type
chr10	88355563	88358829	-	88355805	88358829	A3SS&ES	0.25	50	50	ENSMUST00000121629.8	ENSMUSG00000020061.19	Mybpc1	chr10	protein_coding	myosin binding protein C, slow-type
chr10	88355563	88358829	-	88354431	88358829	A3SS	0.25	50	50	ENSMUST00000124144.2	ENSMUSG00000020061.19	Mybpc1	chr10	protein_coding	myosin binding protein C, slow-type
chr10	88357197	88358829	-	88354431	88358829	A3SS	0.25	50	50	ENSMUST00000124144.2	ENSMUSG00000020061.19	Mybpc1	chr10	protein_coding	myosin binding protein C, slow-type
chr10	88355563	88358829	-	88357197	88358829	A3SS&ES	0.25	50	50	ENSMUST00000119185.8	ENSMUSG00000020061.19	Mybpc1	chr10	protein_coding	myosin binding protein C, slow-type
chr10	88516436	88520828	-	88516436	88518837	5pMXE	0.5	50	50	ENSMUST00000004473.15	ENSMUSG00000004359.17	Spic	chr10	protein_coding	Spi-C transcription factor (Spi-1/PU.1 related)
chr10	88511932;88512827	88512735;88513362	-	88511932	88513362	cassetteExon	0.5	100	100	ENSMUST00000004473.15	ENSMUSG00000004359.17	Spic	chr10	protein_coding	Spi-C transcription factor (Spi-1/PU.1 related)
chr10	88567900	88569405	+	88567426	88569405	A5SS	0.5	50	50	ENSMUST00000170137.8	ENSMUSG00000060904.15	Arl1	chr10	protein_coding	ADP-ribosylation factor-like 1
chr10	88601371	88601454	-	88601371	88602925	A5SS	0.5	50	50	ENSMUST00000004470.9	ENSMUSG00000004356.9	Utp20	chr10	protein_coding	UTP20 small subunit processome component
chr10	88613411	88613972	-	88613411	88614085	A5SS	0.5	50	50	ENSMUST00000004470.9	ENSMUSG00000004356.9	Utp20	chr10	protein_coding	UTP20 small subunit processome component
chr10	88828901	88833940	-	88828901;88831226	88831086;88833940	ES	0.5	50	50	ENSMUST00000182462.8	ENSMUSG00000035189.18	Ano4	chr10	protein_coding	anoctamin 4
chr10	88985306	89152953	-	88985306	89093294	5pMXE	0.25	50	50	ENSMUST00000182462.8	ENSMUSG00000035189.18	Ano4	chr10	protein_coding	anoctamin 4
chr10	88952864;88961086	88960982;88985112	-	88952864	88985112	cassetteExon	0.5	100	100	ENSMUST00000182462.8	ENSMUSG00000035189.18	Ano4	chr10	protein_coding	anoctamin 4
chr10	88920453	88924055	-	88920515	88924055	A3SS	0.5	50	50	ENSMUST00000182462.8	ENSMUSG00000035189.18	Ano4	chr10	protein_coding	anoctamin 4
chr10	88985306	89092831	-	88985306	89093294	A5SS	0.25	50	50	ENSMUST00000182462.8	ENSMUSG00000035189.18	Ano4	chr10	protein_coding	anoctamin 4
chr10	88985306	89092833	-	88985306	89093294	A5SS	0.25	50	50	ENSMUST00000182462.8	ENSMUSG00000035189.18	Ano4	chr10	protein_coding	anoctamin 4
chr10	88985306	89152953	-	88985306	89092833	5pMXE	0.25	50	50	ENSMUST00000182790.8	ENSMUSG00000035189.18	Ano4	chr10	protein_coding	anoctamin 4
chr10	88985306	89092831	-	88985306	89092833	A5SS	0.25	50	50	ENSMUST00000182790.8	ENSMUSG00000035189.18	Ano4	chr10	protein_coding	anoctamin 4
chr10	88828901	88851937	-	88828901	88833940	5pMXE	0.33	50	50	ENSMUST00000182598.2	ENSMUSG00000035189.18	Ano4	chr10	protein_coding	anoctamin 4
chr10	88828901;88834022	88833940;88851937	-	88828901	88851937	cassetteExon	0.5	100	100	ENSMUST00000182888.8	ENSMUSG00000035189.18	Ano4	chr10	protein_coding	anoctamin 4
chr10	88828901	88831086	-	88828901	88851937	A5SS	0.33	50	50	ENSMUST00000182888.8	ENSMUSG00000035189.18	Ano4	chr10	protein_coding	anoctamin 4
chr10	89172266	89180486	-	89163195	89180486	A3SS	0.5	50	50	ENSMUST00000182419.8	ENSMUSG00000035189.18	Ano4	chr10	protein_coding	anoctamin 4
chr10	88985306	89092831	-	88985306	89152953	A5SS	0.25	50	50	ENSMUST00000182419.8	ENSMUSG00000035189.18	Ano4	chr10	protein_coding	anoctamin 4
chr10	89265007	89269627	-	89265007;89266914	89266746;89269627	ES	0.5	50	50	ENSMUST00000099374.9	ENSMUSG00000074802.12	Gas2l3	chr10	protein_coding	growth arrest-specific 2 like 3
chr10	89269669	89270152	-	89269674	89270152	A3SS	0.5	50	50	ENSMUST00000099374.9	ENSMUSG00000074802.12	Gas2l3	chr10	protein_coding	growth arrest-specific 2 like 3
chr10	89270241	89272365	-	89270223	89272365	A3SS	0.5	50	50	ENSMUST00000099374.9	ENSMUSG00000074802.12	Gas2l3	chr10	protein_coding	growth arrest-specific 2 like 3
chr10	89269674	89270155	-	89269674	89270152	A5SS	0.5	50	50	ENSMUST00000099374.9	ENSMUSG00000074802.12	Gas2l3	chr10	protein_coding	growth arrest-specific 2 like 3
chr10	89270223	89270405	-	89270223	89272365	A5SS	0.5	50	50	ENSMUST00000099374.9	ENSMUSG00000074802.12	Gas2l3	chr10	protein_coding	growth arrest-specific 2 like 3
chr10	89265007	89269627	-	89266914	89269627	3pMXE	0.5	50	50	ENSMUST00000218764.2	ENSMUSG00000074802.12	Gas2l3	chr10	protein_coding	growth arrest-specific 2 like 3
chr10	89334279	89352299	-	89334279	89342370	5pMXE	0.5	50	50	ENSMUST00000058126.15	ENSMUSG00000047638.16	Nr1h4	chr10	protein_coding	nuclear receptor subfamily 1, group H, member 4
chr10	89316489	89319234	-	89316489	89319246	A5SS	0.5	50	50	ENSMUST00000058126.15	ENSMUSG00000047638.16	Nr1h4	chr10	protein_coding	nuclear receptor subfamily 1, group H, member 4
chr10	89434613	89435414	-	89434613	89436065	A5SS	0.5	50	50	ENSMUST00000020102.14	ENSMUSG00000019935.17	Slc17a8	chr10	protein_coding	solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8
chr10	89481416	89481539	-	89481419	89481539	A3SS	0.5	50	50	ENSMUST00000174252.8	ENSMUSG00000069539.12	Scyl2	chr10	protein_coding	SCY1-like 2 (S. cerevisiae)
chr10	89490088	89490197	-	89490088	89492570	A5SS	0.5	50	50	ENSMUST00000174252.8	ENSMUSG00000069539.12	Scyl2	chr10	protein_coding	SCY1-like 2 (S. cerevisiae)
chr10	89564084	89568036	-	89564084;89564879	89564762;89568036	ES	0.5	50	50	ENSMUST00000020109.5	ENSMUSG00000019948.5	Actr6	chr10	protein_coding	ARP6 actin-related protein 6
chr10	89561815	89562499	-	89561765	89562499	A3SS	0.5	50	50	ENSMUST00000020109.5	ENSMUSG00000019948.5	Actr6	chr10	protein_coding	ARP6 actin-related protein 6
chr10	89562622	89564003	-	89562622	89564016	A5SS	0.5	50	50	ENSMUST00000020109.5	ENSMUSG00000019948.5	Actr6	chr10	protein_coding	ARP6 actin-related protein 6
chr10	89564879	89567821	-	89564879	89568036	A5SS	0.33	50	50	ENSMUST00000020109.5	ENSMUSG00000019948.5	Actr6	chr10	protein_coding	ARP6 actin-related protein 6
chr10	89564879	89567900	-	89564879	89568036	A5SS	0.33	50	50	ENSMUST00000020109.5	ENSMUSG00000019948.5	Actr6	chr10	protein_coding	ARP6 actin-related protein 6
chr10	89564879	89567900	-	89564879	89567821	A5SS	0.33	50	50	ENSMUST00000218442.2	ENSMUSG00000019948.5	Actr6	chr10	protein_coding	ARP6 actin-related protein 6
chr10	89564084	89568036	-	89564084	89564762	A5SS&ES	0.5	50	50	ENSMUST00000218568.2	ENSMUSG00000019948.5	Actr6	chr10	protein_coding	ARP6 actin-related protein 6
chr10	89627343	89638881	+	89627343;89630486	89630345;89638881	ES	0.5	50	50	ENSMUST00000020112.7	ENSMUSG00000019951.11	Uhrf1bp1l	chr10	protein_coding	UHRF1 (ICBP90) binding protein 1-like
chr10	89581150;89591416	89591283;89608449	+	89581150	89608449	cassetteExon	0.5	100	100	ENSMUST00000020112.7	ENSMUSG00000019951.11	Uhrf1bp1l	chr10	protein_coding	UHRF1 (ICBP90) binding protein 1-like
chr10	89645625	89647349	+	89645640	89647349	A5SS	0.5	50	50	ENSMUST00000020112.7	ENSMUSG00000019951.11	Uhrf1bp1l	chr10	protein_coding	UHRF1 (ICBP90) binding protein 1-like
chr10	89647803	89647906	+	89647602	89647906	A5SS	0.5	50	50	ENSMUST00000020112.7	ENSMUSG00000019951.11	Uhrf1bp1l	chr10	protein_coding	UHRF1 (ICBP90) binding protein 1-like
chr10	89581150	89591283	+	89581150	89611801	A3SS	0.33	50	50	ENSMUST00000220375.2	ENSMUSG00000019951.11	Uhrf1bp1l	chr10	protein_coding	UHRF1 (ICBP90) binding protein 1-like
chr10	89581150	89608449	+	89581150	89611801	A3SS	0.33	50	50	ENSMUST00000220375.2	ENSMUSG00000019951.11	Uhrf1bp1l	chr10	protein_coding	UHRF1 (ICBP90) binding protein 1-like
chr10	89609980	89611801	+	89581150	89611801	A5SS	0.5	50	50	ENSMUST00000220375.2	ENSMUSG00000019951.11	Uhrf1bp1l	chr10	protein_coding	UHRF1 (ICBP90) binding protein 1-like
chr10	89905405	89909841	+	89905405;89907031	89906930;89909841	ES	0.5	50	50	ENSMUST00000183156.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90731068	90757158	+	90731068;90733288	90733109;90757158	ES	0.33	50	50	ENSMUST00000183156.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90516781;90750629	90750555;90757158	+	90516781;90733288	90730961;90757158	MXE	0.5	100	100	ENSMUST00000183156.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90731068;90750629	90750555;90757158	+	90731068;90733288	90733109;90757158	MXE	0.5	100	100	ENSMUST00000183156.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90731068;90750629	90750558;90757158	+	90731068;90733288	90733109;90757158	MXE	0.5	100	100	ENSMUST00000183156.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90733288;90750629	90750555;90757158	+	90733288	90757158	cassetteExon	0.5	100	100	ENSMUST00000183156.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90733288;90750629	90750558;90757158	+	90733288	90757158	cassetteExon	0.5	100	100	ENSMUST00000183156.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90413057	90422914	+	90413057	90480320	A3SS	0.33	50	50	ENSMUST00000183156.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90413057	90435771	+	90413057	90480320	A3SS	0.33	50	50	ENSMUST00000183156.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90516781	90519536	+	90516781	90730961	A3SS	0.33	50	50	ENSMUST00000183156.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90731068	90733211	+	90731068	90733109	A3SS	0.2	50	50	ENSMUST00000183156.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90802254	90802868	+	90802254	90805666	A3SS	0.25	50	50	ENSMUST00000183156.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90802254	90805650	+	90802254	90805666	A3SS	0.25	50	50	ENSMUST00000183156.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90802254	90805669	+	90802254	90805666	A3SS	0.25	50	50	ENSMUST00000183156.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	89832564	89869076	+	89709667	89869076	A5SS	0.5	50	50	ENSMUST00000183156.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	89882514	89885678	+	89878564	89885678	A5SS	0.5	50	50	ENSMUST00000183156.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90348737	90412951	+	90348749	90412951	A5SS	0.16	50	50	ENSMUST00000183156.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90411601	90412951	+	90348749	90412951	A5SS	0.16	50	50	ENSMUST00000183156.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90412362	90412951	+	90348749	90412951	A5SS	0.16	50	50	ENSMUST00000183156.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90412537	90412951	+	90348749	90412951	A5SS	0.16	50	50	ENSMUST00000183156.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90412691	90412951	+	90348749	90412951	A5SS	0.16	50	50	ENSMUST00000183156.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90665035	90730961	+	90516781	90730961	A5SS	0.25	50	50	ENSMUST00000183156.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90665542	90730961	+	90516781	90730961	A5SS	0.25	50	50	ENSMUST00000183156.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90665959	90730961	+	90516781	90730961	A5SS	0.25	50	50	ENSMUST00000183156.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90516781;90750629	90750555;90757158	+	90516781;90731068	90730961;90757158	MXE	0.5	100	100	ENSMUST00000182907.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90731068;90733288	90733109;90802087	+	90731068;90784534	90757158;90802087	MXE	0.5	100	100	ENSMUST00000182907.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90731068;90733288	90733211;90757158	+	90731068	90757158	cassetteExon	0.5	100	100	ENSMUST00000182907.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90731068;90733288	90733211;90802087	+	90731068;90784534	90757158;90802087	MXE	0.5	100	100	ENSMUST00000182907.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90731068;90750629	90750555;90757158	+	90731068	90757158	cassetteExon	0.5	100	100	ENSMUST00000182907.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90731068;90750629	90750558;90757158	+	90731068	90757158	cassetteExon	0.5	100	100	ENSMUST00000182907.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	89709667	89869076	+	89709667	89999023	A3SS	0.5	50	50	ENSMUST00000182907.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	89913004	89999023	+	89709667	89999023	A5SS	0.5	50	50	ENSMUST00000182907.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90411601	90412951	+	90348737	90412951	A5SS	0.16	50	50	ENSMUST00000182907.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90412362	90412951	+	90348737	90412951	A5SS	0.16	50	50	ENSMUST00000182907.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90412537	90412951	+	90348737	90412951	A5SS	0.16	50	50	ENSMUST00000182907.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90412691	90412951	+	90348737	90412951	A5SS	0.16	50	50	ENSMUST00000182907.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90516781	90750555	+	90516781	90519536	3pMXE	0.33	50	50	ENSMUST00000099368.11	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	89905405	89909841	+	89905405	89906930	3pMXE	0.5	50	50	ENSMUST00000183012.2	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	89905405	89909841	+	89907031	89909841	5pMXE	0.5	50	50	ENSMUST00000183109.2	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90802254	90805650	+	90802254	90802868	A3SS	0.25	50	50	ENSMUST00000182356.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90802254	90805669	+	90802254	90802868	A3SS	0.25	50	50	ENSMUST00000182356.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90412362	90412951	+	90411601	90412951	A5SS	0.16	50	50	ENSMUST00000182356.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90412537	90412951	+	90411601	90412951	A5SS	0.16	50	50	ENSMUST00000182356.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90412691	90412951	+	90411601	90412951	A5SS	0.16	50	50	ENSMUST00000182356.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90733288	90802087	+	90733288	90757158	3pMXE	0.25	50	50	ENSMUST00000182427.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90412537	90412951	+	90412362	90412951	A5SS	0.16	50	50	ENSMUST00000182427.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90412691	90412951	+	90412362	90412951	A5SS	0.16	50	50	ENSMUST00000182427.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90802254	90805650	+	90802254	90805669	A3SS	0.25	50	50	ENSMUST00000182053.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90802258	90805669	+	90802254	90805669	A5SS	0.5	50	50	ENSMUST00000182053.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90731068	90750558	+	90731068;90733288	90733109;90750558	ES	0.5	50	50	ENSMUST00000182113.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90516781	90750555	+	90516781	90730961	A3SS&ES	0.33	50	50	ENSMUST00000182113.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90731068	90750555	+	90731068	90733109	A3SS&ES	0.2	50	50	ENSMUST00000182113.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90733288	90750555	+	90733288	90750558	A3SS	0.25	50	50	ENSMUST00000182113.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90516781;90731068	90730961;90750555	+	90516781	90750555	cassetteExon	0.5	100	100	ENSMUST00000182786.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90412691	90412951	+	90412537	90412951	A5SS	0.16	50	50	ENSMUST00000182786.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90733288	90750555	+	90516781	90750555	A5SS	0.33	50	50	ENSMUST00000182786.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90733288	90757158	+	90750629	90757158	A5SS&ES	0.33	50	50	ENSMUST00000182786.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90733288	90802087	+	90784534	90802087	A5SS&ES	0.5	50	50	ENSMUST00000182786.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90731068	90750558	+	90731068;90733288	90733211;90750558	ES	0.5	50	50	ENSMUST00000182600.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90731068	90750555	+	90731068	90733211	A3SS&ES	0.2	50	50	ENSMUST00000182600.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90731068;90733288	90733109;90750555	+	90731068	90750555	cassetteExon	0.5	100	100	ENSMUST00000182284.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90731068;90733288	90733109;90802087	+	90731068;90784534	90750555;90802087	MXE	0.5	100	100	ENSMUST00000182284.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90731068;90733288	90733211;90750555	+	90731068	90750555	cassetteExon	0.5	100	100	ENSMUST00000182284.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90731068;90733288	90733211;90757158	+	90731068;90750629	90750555;90757158	MXE	0.5	100	100	ENSMUST00000182284.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90731068;90733288	90733211;90802087	+	90731068;90784534	90750555;90802087	MXE	0.5	100	100	ENSMUST00000182284.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90731068	90750558	+	90731068	90750555	A3SS	0.2	50	50	ENSMUST00000182284.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90731068;90733288	90733109;90802087	+	90731068;90784534	90750558;90802087	MXE	0.5	100	100	ENSMUST00000182960.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90731068;90733288	90733211;90757158	+	90731068;90750629	90750558;90757158	MXE	0.5	100	100	ENSMUST00000182960.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90731068;90733288	90733211;90802087	+	90731068;90784534	90750558;90802087	MXE	0.5	100	100	ENSMUST00000182960.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90413057	90422914	+	90413057	90435771	A3SS	0.33	50	50	ENSMUST00000182003.2	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90731068	90750558	+	90731068	90733109	A3SS&ES	0.2	50	50	ENSMUST00000182550.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90665542	90730961	+	90665035	90730961	A5SS	0.25	50	50	ENSMUST00000182192.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90665959	90730961	+	90665035	90730961	A5SS	0.25	50	50	ENSMUST00000182192.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90731068	90757158	+	90731068	90733109	3pMXE	0.2	50	50	ENSMUST00000183051.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90665959	90730961	+	90665542	90730961	A5SS	0.25	50	50	ENSMUST00000182202.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90731068	90757158	+	90731068	90750558	3pMXE	0.2	50	50	ENSMUST00000182632.8	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90731068	90750558	+	90731068	90733211	A3SS&ES	0.2	50	50	ENSMUST00000183024.2	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90731068	90757158	+	90731068	90733211	A3SS&ES	0.2	50	50	ENSMUST00000183024.2	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90733288	90750555	+	90733288	90802087	A3SS	0.25	50	50	ENSMUST00000183024.2	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90733288	90750558	+	90733288	90802087	A3SS	0.25	50	50	ENSMUST00000183024.2	ENSMUSG00000058589.15	Anks1b	chr10	protein_coding	ankyrin repeat and sterile alpha motif domain containing 1B
chr10	90915993	90918045	-	90915950	90918045	A3SS	0.5	50	50	ENSMUST00000159110.8	ENSMUSG00000019979.13	Apaf1	chr10	protein_coding	apoptotic peptidase activating factor 1
chr10	90835639	90835991	-	90835639	90836872	A5SS	0.5	50	50	ENSMUST00000159110.8	ENSMUSG00000019979.13	Apaf1	chr10	protein_coding	apoptotic peptidase activating factor 1
chr10	90913593	90915342	-	90913593	90915309	A5SS	0.5	50	50	ENSMUST00000159110.8	ENSMUSG00000019979.13	Apaf1	chr10	protein_coding	apoptotic peptidase activating factor 1
chr10	90919158;90919750	90919617;90929001	+	90919158	90929001	cassetteExon	0.5	100	100	ENSMUST00000020150.10	ENSMUSG00000019975.13	Ikbip	chr10	protein_coding	IKBKB interacting protein
chr10	90929118	90931646	+	90929118	90937617	A3SS	0.5	50	50	ENSMUST00000020150.10	ENSMUSG00000019975.13	Ikbip	chr10	protein_coding	IKBKB interacting protein
chr10	90932334	90937617	+	90929118	90937617	A5SS	0.33	50	50	ENSMUST00000020150.10	ENSMUSG00000019975.13	Ikbip	chr10	protein_coding	IKBKB interacting protein
chr10	90936330	90937617	+	90929118	90937617	A5SS	0.33	50	50	ENSMUST00000020150.10	ENSMUSG00000019975.13	Ikbip	chr10	protein_coding	IKBKB interacting protein
chr10	90936330	90937617	+	90932334	90937617	A5SS	0.33	50	50	ENSMUST00000130682.2	ENSMUSG00000019975.13	Ikbip	chr10	protein_coding	IKBKB interacting protein
chr10	90955568;90958193	90957970;90959420	-	90955568;90957905	90957784;90959420	MXE	0.5	100	100	ENSMUST00000076694.13	ENSMUSG00000061904.13	Slc25a3	chr10	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3
chr10	90955568;90958193	90958069;90959420	-	90955568;90957905	90957784;90959420	MXE	0.5	100	100	ENSMUST00000076694.13	ENSMUSG00000061904.13	Slc25a3	chr10	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3
chr10	90955568	90956487	-	90955568	90957784	A5SS	0.25	50	50	ENSMUST00000076694.13	ENSMUSG00000061904.13	Slc25a3	chr10	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3
chr10	90955568	90956487	-	90955568	90957970	A5SS	0.25	50	50	ENSMUST00000163246.8	ENSMUSG00000061904.13	Slc25a3	chr10	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3
chr10	90955568	90958069	-	90955568	90957970	A5SS	0.25	50	50	ENSMUST00000163246.8	ENSMUSG00000061904.13	Slc25a3	chr10	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3
chr10	90955568	90956487	-	90955568	90958069	A5SS	0.25	50	50	ENSMUST00000170810.8	ENSMUSG00000061904.13	Slc25a3	chr10	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3
chr10	90955568	90957970	-	90955568	90957784	A5SS	0.25	50	50	ENSMUST00000171960.2	ENSMUSG00000061904.13	Slc25a3	chr10	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3
chr10	90955568	90958069	-	90955568	90957784	A5SS	0.25	50	50	ENSMUST00000171960.2	ENSMUSG00000061904.13	Slc25a3	chr10	protein_coding	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3
chr10	90989042	90994610	-	90989042;90989259	90989140;90994610	ES	0.25	50	50	ENSMUST00000072239.14	ENSMUSG00000019961.18	Tmpo	chr10	protein_coding	thymopoietin
chr10	91001931	91016729	-	91001931	91006900	5pMXE	0.33	50	50	ENSMUST00000072239.14	ENSMUSG00000019961.18	Tmpo	chr10	protein_coding	thymopoietin
chr10	90999223	90999905	-	90994707	90999905	A3SS	0.5	50	50	ENSMUST00000072239.14	ENSMUSG00000019961.18	Tmpo	chr10	protein_coding	thymopoietin
chr10	91001931	91006148	-	91001931	91006900	A5SS	0.33	50	50	ENSMUST00000072239.14	ENSMUSG00000019961.18	Tmpo	chr10	protein_coding	thymopoietin
chr10	91001931	91016729	-	91001931	91006148	5pMXE	0.33	50	50	ENSMUST00000217449.2	ENSMUSG00000019961.18	Tmpo	chr10	protein_coding	thymopoietin
chr10	90987659	90994610	-	90987659;90988600	90988490;90994610	ES	0.25	50	50	ENSMUST00000099355.12	ENSMUSG00000019961.18	Tmpo	chr10	protein_coding	thymopoietin
chr10	90988600;90989042	90988947;90994610	-	90988600	90994610	cassetteExon	0.5	100	100	ENSMUST00000099355.12	ENSMUSG00000019961.18	Tmpo	chr10	protein_coding	thymopoietin
chr10	90988600;90989259	90988947;90994610	-	90988600	90994610	cassetteExon	0.5	100	100	ENSMUST00000099355.12	ENSMUSG00000019961.18	Tmpo	chr10	protein_coding	thymopoietin
chr10	90989042	90994610	-	90987659	90994610	A3SS	0.25	50	50	ENSMUST00000105293.11	ENSMUSG00000019961.18	Tmpo	chr10	protein_coding	thymopoietin
chr10	90989259	90994610	-	90987659	90994610	A3SS	0.25	50	50	ENSMUST00000105293.11	ENSMUSG00000019961.18	Tmpo	chr10	protein_coding	thymopoietin
chr10	90989042	90994610	-	90989042	90989140	5pMXE	0.5	50	50	ENSMUST00000213262.2	ENSMUSG00000019961.18	Tmpo	chr10	protein_coding	thymopoietin
chr10	91015031	91016729	-	91001931	91016729	A3SS	0.5	50	50	ENSMUST00000216402.2	ENSMUSG00000019961.18	Tmpo	chr10	protein_coding	thymopoietin
chr10	91044720	91051665	-	91044720	91051558	A5SS	0.5	50	50	ENSMUST00000216311.2	ENSMUSG00000111544.2	4930534H03Rik	chr10	lncRNA	RIKEN cDNA 4930534H03 gene
chr10	91053180	91056376	-	91053180	91055734	A5SS	0.5	50	50	ENSMUST00000216311.2	ENSMUSG00000111544.2	4930534H03Rik	chr10	lncRNA	RIKEN cDNA 4930534H03 gene
chr10	91907160	91911375	-	91907160;91911274	91911032;91911375	ES	0.5	50	50	ENSMUST00000218060.2	ENSMUSG00000112117.3	Rmst	chr10	lncRNA	rhabdomyosarcoma 2 associated transcript (non-coding RNA)
chr10	91911535	91939568	-	91911535;91919835	91919736;91939568	ES	0.33	50	50	ENSMUST00000218060.2	ENSMUSG00000112117.3	Rmst	chr10	lncRNA	rhabdomyosarcoma 2 associated transcript (non-coding RNA)
chr10	91919835	91945501	-	91919835	91939568	5pMXE	0.5	50	50	ENSMUST00000218060.2	ENSMUSG00000112117.3	Rmst	chr10	lncRNA	rhabdomyosarcoma 2 associated transcript (non-coding RNA)
chr10	91918837	91919736	-	91911535	91919736	A3SS	0.5	50	50	ENSMUST00000218060.2	ENSMUSG00000112117.3	Rmst	chr10	lncRNA	rhabdomyosarcoma 2 associated transcript (non-coding RNA)
chr10	91919944	91939568	-	91919835	91939568	A3SS	0.33	50	50	ENSMUST00000218060.2	ENSMUSG00000112117.3	Rmst	chr10	lncRNA	rhabdomyosarcoma 2 associated transcript (non-coding RNA)
chr10	91907160	91907520	-	91907160	91911032	A5SS	0.33	50	50	ENSMUST00000218060.2	ENSMUSG00000112117.3	Rmst	chr10	lncRNA	rhabdomyosarcoma 2 associated transcript (non-coding RNA)
chr10	91907160	91911375	-	91907160	91907520	5pMXE	0.33	50	50	ENSMUST00000218255.2	ENSMUSG00000112117.3	Rmst	chr10	lncRNA	rhabdomyosarcoma 2 associated transcript (non-coding RNA)
chr10	91911535;91919944	91919736;91939568	-	91911535	91939568	cassetteExon	0.5	100	100	ENSMUST00000220192.2	ENSMUSG00000112117.3	Rmst	chr10	lncRNA	rhabdomyosarcoma 2 associated transcript (non-coding RNA)
chr10	91907160	91911375	-	91911274	91911375	3pMXE	0.5	50	50	ENSMUST00000182623.4	ENSMUSG00000112117.3	Rmst	chr10	lncRNA	rhabdomyosarcoma 2 associated transcript (non-coding RNA)
chr10	91972552	92000489	-	91972552;91998026	91997967;92000489	ES	0.5	50	50	ENSMUST00000219606.2	ENSMUSG00000112117.3	Rmst	chr10	lncRNA	rhabdomyosarcoma 2 associated transcript (non-coding RNA)
chr10	91919944;91939774	91939568;91945501	-	91919944	91945501	cassetteExon	0.5	100	100	ENSMUST00000219606.2	ENSMUSG00000112117.3	Rmst	chr10	lncRNA	rhabdomyosarcoma 2 associated transcript (non-coding RNA)
chr10	91919835	91945501	-	91919944	91945501	A3SS	0.33	50	50	ENSMUST00000219606.2	ENSMUSG00000112117.3	Rmst	chr10	lncRNA	rhabdomyosarcoma 2 associated transcript (non-coding RNA)
chr10	91969210	91970826	-	91970178	91970826	A3SS	0.5	50	50	ENSMUST00000219606.2	ENSMUSG00000112117.3	Rmst	chr10	lncRNA	rhabdomyosarcoma 2 associated transcript (non-coding RNA)
chr10	91970941	91971563	-	91970937	91971563	A3SS	0.33	50	50	ENSMUST00000219606.2	ENSMUSG00000112117.3	Rmst	chr10	lncRNA	rhabdomyosarcoma 2 associated transcript (non-coding RNA)
chr10	91970957	91971563	-	91970937	91971563	A3SS	0.33	50	50	ENSMUST00000219606.2	ENSMUSG00000112117.3	Rmst	chr10	lncRNA	rhabdomyosarcoma 2 associated transcript (non-coding RNA)
chr10	91971667	91972419	-	91971671	91972419	A3SS	0.5	50	50	ENSMUST00000219606.2	ENSMUSG00000112117.3	Rmst	chr10	lncRNA	rhabdomyosarcoma 2 associated transcript (non-coding RNA)
chr10	91998026	91998516	-	91998026	92000489	A5SS	0.33	50	50	ENSMUST00000219606.2	ENSMUSG00000112117.3	Rmst	chr10	lncRNA	rhabdomyosarcoma 2 associated transcript (non-coding RNA)
chr10	91998026	91998618	-	91998026	92000489	A5SS	0.33	50	50	ENSMUST00000219606.2	ENSMUSG00000112117.3	Rmst	chr10	lncRNA	rhabdomyosarcoma 2 associated transcript (non-coding RNA)
chr10	91969210	91970104	-	91969210;91969713	91969615;91970104	ES	0.5	50	50	ENSMUST00000219444.2	ENSMUSG00000112117.3	Rmst	chr10	lncRNA	rhabdomyosarcoma 2 associated transcript (non-coding RNA)
chr10	91919835	91945501	-	91939774	91945501	A3SS&ES	0.33	50	50	ENSMUST00000219444.2	ENSMUSG00000112117.3	Rmst	chr10	lncRNA	rhabdomyosarcoma 2 associated transcript (non-coding RNA)
chr10	91970957	91971563	-	91970941	91971563	A3SS	0.33	50	50	ENSMUST00000219444.2	ENSMUSG00000112117.3	Rmst	chr10	lncRNA	rhabdomyosarcoma 2 associated transcript (non-coding RNA)
chr10	91919835;91939774	91939568;91945501	-	91919835	91945501	cassetteExon	0.5	100	100	ENSMUST00000219726.2	ENSMUSG00000112117.3	Rmst	chr10	lncRNA	rhabdomyosarcoma 2 associated transcript (non-coding RNA)
chr10	91969210;91970178	91970104;91970826	-	91969210	91970826	cassetteExon	0.5	100	100	ENSMUST00000219726.2	ENSMUSG00000112117.3	Rmst	chr10	lncRNA	rhabdomyosarcoma 2 associated transcript (non-coding RNA)
chr10	91969210	91969615	-	91969210	91970826	A5SS	0.33	50	50	ENSMUST00000219726.2	ENSMUSG00000112117.3	Rmst	chr10	lncRNA	rhabdomyosarcoma 2 associated transcript (non-coding RNA)
chr10	91998026	91998516	-	91998026	91998618	A5SS	0.33	50	50	ENSMUST00000217866.2	ENSMUSG00000112117.3	Rmst	chr10	lncRNA	rhabdomyosarcoma 2 associated transcript (non-coding RNA)
chr10	92236906	92245276	+	92236906	92240444	3pMXE	0.5	50	50	ENSMUST00000216155.2	ENSMUSG00000110794.2	4930401A07Rik	chr10	lncRNA	RIKEN cDNA 4930401A07 gene
chr10	92550052	92555329	-	92550052	92552028	A5SS&ES	0.5	50	50	ENSMUST00000020163.7	ENSMUSG00000019988.8	Nedd1	chr10	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 1
chr10	92901114	92905691	-	92901114;92902712	92902569;92905691	ES	0.5	50	50	ENSMUST00000168110.8	ENSMUSG00000020014.19	Cfap54	chr10	protein_coding	cilia and flagella associated protein 54
chr10	92744748;92753181	92753107;92757183	-	92744748	92757183	cassetteExon	0.5	100	100	ENSMUST00000168110.8	ENSMUSG00000020014.19	Cfap54	chr10	protein_coding	cilia and flagella associated protein 54
chr10	92774151;92776197	92776003;92778729	-	92774151	92778729	cassetteExon	0.5	100	100	ENSMUST00000168110.8	ENSMUSG00000020014.19	Cfap54	chr10	protein_coding	cilia and flagella associated protein 54
chr10	92865030;92867553	92867407;92868748	-	92865030	92868748	cassetteExon	0.5	100	100	ENSMUST00000168110.8	ENSMUSG00000020014.19	Cfap54	chr10	protein_coding	cilia and flagella associated protein 54
chr10	92636290	92636992	-	92612160	92636992	A3SS	0.5	50	50	ENSMUST00000168110.8	ENSMUSG00000020014.19	Cfap54	chr10	protein_coding	cilia and flagella associated protein 54
chr10	92857931	92860875	-	92852473	92860875	A3SS	0.5	50	50	ENSMUST00000168110.8	ENSMUSG00000020014.19	Cfap54	chr10	protein_coding	cilia and flagella associated protein 54
chr10	92905796	92905877	-	92905796	92917127	A5SS	0.5	50	50	ENSMUST00000168110.8	ENSMUSG00000020014.19	Cfap54	chr10	protein_coding	cilia and flagella associated protein 54
chr10	92774151	92778729	-	92774151	92776003	5pMXE	0.5	50	50	ENSMUST00000067705.8	ENSMUSG00000020014.19	Cfap54	chr10	protein_coding	cilia and flagella associated protein 54
chr10	92744748	92757183	-	92753181	92757183	3pMXE	0.5	50	50	ENSMUST00000164979.2	ENSMUSG00000020014.19	Cfap54	chr10	protein_coding	cilia and flagella associated protein 54
chr10	92861399	92864454	-	92852473	92864454	A3SS	0.5	50	50	ENSMUST00000170065.8	ENSMUSG00000020014.19	Cfap54	chr10	protein_coding	cilia and flagella associated protein 54
chr10	92852473	92860875	-	92852473	92864454	A5SS	0.5	50	50	ENSMUST00000170065.8	ENSMUSG00000020014.19	Cfap54	chr10	protein_coding	cilia and flagella associated protein 54
chr10	92901114	92905691	-	92902712	92905691	3pMXE	0.5	50	50	ENSMUST00000171781.2	ENSMUSG00000020014.19	Cfap54	chr10	protein_coding	cilia and flagella associated protein 54
chr10	92921148	92927699	+	92920301	92927699	A5SS	0.5	50	50	ENSMUST00000214199.2	ENSMUSG00000111013.2	Gm32468	chr10	lncRNA	predicted gene, 32468
chr10	93017535	93044034	+	92997062	93044034	A5SS	0.33	50	50	ENSMUST00000215495.2	ENSMUSG00000020015.11	Cdk17	chr10	protein_coding	cyclin-dependent kinase 17
chr10	93042933	93044034	+	92997062	93044034	A5SS	0.33	50	50	ENSMUST00000215495.2	ENSMUSG00000020015.11	Cdk17	chr10	protein_coding	cyclin-dependent kinase 17
chr10	93074905	93077548	+	93074905	93075450	3pMXE	0.5	50	50	ENSMUST00000069965.9	ENSMUSG00000020015.11	Cdk17	chr10	protein_coding	cyclin-dependent kinase 17
chr10	93042933	93044034	+	93017535	93044034	A5SS	0.33	50	50	ENSMUST00000213378.2	ENSMUSG00000020015.11	Cdk17	chr10	protein_coding	cyclin-dependent kinase 17
chr10	93077647;93098117	93097920;93101227	+	93077647	93101227	cassetteExon	0.5	100	100	ENSMUST00000215286.2	ENSMUSG00000020015.11	Cdk17	chr10	protein_coding	cyclin-dependent kinase 17
chr10	93090673	93120631	-	93090673;93101542	93100742;93120631	ES	0.5	50	50	ENSMUST00000008542.12	ENSMUSG00000008398.17	Elk3	chr10	protein_coding	ELK3, member of ETS oncogene family
chr10	93101542	93120631	-	93090673	93120631	A3SS	0.5	50	50	ENSMUST00000151153.2	ENSMUSG00000008398.17	Elk3	chr10	protein_coding	ELK3, member of ETS oncogene family
chr10	93090673	93100742	-	93090673	93120631	A5SS	0.5	50	50	ENSMUST00000151153.2	ENSMUSG00000008398.17	Elk3	chr10	protein_coding	ELK3, member of ETS oncogene family
chr10	93316648	93318824	+	93316648;93318194	93318112;93318824	ES	0.5	50	50	ENSMUST00000016033.9	ENSMUSG00000015889.9	Lta4h	chr10	protein_coding	leukotriene A4 hydrolase
chr10	93326849	93327672	+	93326849;93327027	93326961;93327672	ES	0.5	50	50	ENSMUST00000129421.8	ENSMUSG00000020017.15	Hal	chr10	protein_coding	histidine ammonia lyase
chr10	93337038	93343277	+	93339431	93343277	A5SS&ES	0.5	50	50	ENSMUST00000129421.8	ENSMUSG00000020017.15	Hal	chr10	protein_coding	histidine ammonia lyase
chr10	93339172	93339266	+	93339189	93339266	A5SS	0.5	50	50	ENSMUST00000129421.8	ENSMUSG00000020017.15	Hal	chr10	protein_coding	histidine ammonia lyase
chr10	93403618	93406709	+	93403618;93405795	93405738;93406709	ES	0.5	50	50	ENSMUST00000092215.6	ENSMUSG00000036168.16	Ccdc38	chr10	protein_coding	coiled-coil domain containing 38
chr10	93411270;93414753	93414571;93415624	+	93411270	93415624	cassetteExon	0.5	100	100	ENSMUST00000092215.6	ENSMUSG00000036168.16	Ccdc38	chr10	protein_coding	coiled-coil domain containing 38
chr10	93390890	93391381	+	93386189	93391381	A5SS	0.5	50	50	ENSMUST00000092215.6	ENSMUSG00000036168.16	Ccdc38	chr10	protein_coding	coiled-coil domain containing 38
chr10	93400847	93403526	+	93401807	93403526	A5SS&ES	0.5	50	50	ENSMUST00000092215.6	ENSMUSG00000036168.16	Ccdc38	chr10	protein_coding	coiled-coil domain containing 38
chr10	93477370	93480333	+	93476637	93480333	A5SS	0.5	50	50	ENSMUST00000147080.2	ENSMUSG00000020019.5	Ntn4	chr10	protein_coding	netrin 4
chr10	93669753	93681473	+	93679913	93681473	A5SS&ES	0.5	50	50	ENSMUST00000095333.6	ENSMUSG00000020020.9	Usp44	chr10	protein_coding	ubiquitin specific peptidase 44
chr10	93698354	93701269	-	93698354;93698895	93698792;93701269	ES	0.5	50	50	ENSMUST00000047910.15	ENSMUSG00000036112.16	Metap2	chr10	protein_coding	methionine aminopeptidase 2
chr10	93715435	93715935	-	93715504	93715935	A3SS	0.25	50	50	ENSMUST00000047910.15	ENSMUSG00000036112.16	Metap2	chr10	protein_coding	methionine aminopeptidase 2
chr10	93715498	93715935	-	93715504	93715935	A3SS	0.25	50	50	ENSMUST00000047910.15	ENSMUSG00000036112.16	Metap2	chr10	protein_coding	methionine aminopeptidase 2
chr10	93715534	93715935	-	93715504	93715935	A3SS	0.25	50	50	ENSMUST00000047910.15	ENSMUSG00000036112.16	Metap2	chr10	protein_coding	methionine aminopeptidase 2
chr10	93722960	93725400	-	93722963	93725400	A3SS	0.5	50	50	ENSMUST00000047910.15	ENSMUSG00000036112.16	Metap2	chr10	protein_coding	methionine aminopeptidase 2
chr10	93722963	93723283	-	93722963	93725400	A5SS	0.33	50	50	ENSMUST00000047910.15	ENSMUSG00000036112.16	Metap2	chr10	protein_coding	methionine aminopeptidase 2
chr10	93722963	93725634	-	93722963	93725400	A5SS	0.33	50	50	ENSMUST00000047910.15	ENSMUSG00000036112.16	Metap2	chr10	protein_coding	methionine aminopeptidase 2
chr10	93698354	93701269	-	93698354	93698792	5pMXE	0.5	50	50	ENSMUST00000181894.2	ENSMUSG00000036112.16	Metap2	chr10	protein_coding	methionine aminopeptidase 2
chr10	93726160	93726959	-	93726136	93726959	A3SS	0.33	50	50	ENSMUST00000180840.8	ENSMUSG00000036112.16	Metap2	chr10	protein_coding	methionine aminopeptidase 2
chr10	93726465	93726959	-	93726136	93726959	A3SS	0.33	50	50	ENSMUST00000180840.8	ENSMUSG00000036112.16	Metap2	chr10	protein_coding	methionine aminopeptidase 2
chr10	93715498	93715935	-	93715435	93715935	A3SS	0.25	50	50	ENSMUST00000181091.8	ENSMUSG00000036112.16	Metap2	chr10	protein_coding	methionine aminopeptidase 2
chr10	93715534	93715935	-	93715435	93715935	A3SS	0.25	50	50	ENSMUST00000181091.8	ENSMUSG00000036112.16	Metap2	chr10	protein_coding	methionine aminopeptidase 2
chr10	93715498	93715935	-	93715534	93715935	A3SS	0.25	50	50	ENSMUST00000181217.8	ENSMUSG00000036112.16	Metap2	chr10	protein_coding	methionine aminopeptidase 2
chr10	93722963	93725634	-	93722963	93723283	5pMXE	0.33	50	50	ENSMUST00000216232.2	ENSMUSG00000036112.16	Metap2	chr10	protein_coding	methionine aminopeptidase 2
chr10	93726465	93726959	-	93726160	93726959	A3SS	0.33	50	50	ENSMUST00000181740.2	ENSMUSG00000036112.16	Metap2	chr10	protein_coding	methionine aminopeptidase 2
chr10	93806566	93809697	-	93775162	93809697	A3SS	0.25	50	50	ENSMUST00000148450.8	ENSMUSG00000036099.17	Vezt	chr10	protein_coding	vezatin, adherens junctions transmembrane protein
chr10	93807569	93809697	-	93775162	93809697	A3SS	0.25	50	50	ENSMUST00000148450.8	ENSMUSG00000036099.17	Vezt	chr10	protein_coding	vezatin, adherens junctions transmembrane protein
chr10	93809471	93809697	-	93775162	93809697	A3SS	0.25	50	50	ENSMUST00000148450.8	ENSMUSG00000036099.17	Vezt	chr10	protein_coding	vezatin, adherens junctions transmembrane protein
chr10	93829528;93830874	93830750;93832700	-	93829528	93832700	cassetteExon	0.5	100	100	ENSMUST00000119818.8	ENSMUSG00000036099.17	Vezt	chr10	protein_coding	vezatin, adherens junctions transmembrane protein
chr10	93807569	93809697	-	93806566	93809697	A3SS	0.25	50	50	ENSMUST00000119818.8	ENSMUSG00000036099.17	Vezt	chr10	protein_coding	vezatin, adherens junctions transmembrane protein
chr10	93809471	93809697	-	93806566	93809697	A3SS	0.25	50	50	ENSMUST00000119818.8	ENSMUSG00000036099.17	Vezt	chr10	protein_coding	vezatin, adherens junctions transmembrane protein
chr10	93824623	93826002	-	93820355	93826002	A3SS	0.5	50	50	ENSMUST00000119818.8	ENSMUSG00000036099.17	Vezt	chr10	protein_coding	vezatin, adherens junctions transmembrane protein
chr10	93826145	93829379	-	93826149	93829379	A3SS	0.5	50	50	ENSMUST00000119818.8	ENSMUSG00000036099.17	Vezt	chr10	protein_coding	vezatin, adherens junctions transmembrane protein
chr10	93829516	93832700	-	93829528	93832700	A3SS	0.33	50	50	ENSMUST00000119818.8	ENSMUSG00000036099.17	Vezt	chr10	protein_coding	vezatin, adherens junctions transmembrane protein
chr10	93829516	93836213	-	93832975	93836213	A3SS&ES	0.5	50	50	ENSMUST00000119818.8	ENSMUSG00000036099.17	Vezt	chr10	protein_coding	vezatin, adherens junctions transmembrane protein
chr10	93842956	93856490	-	93842956	93871532	A5SS	0.33	50	50	ENSMUST00000119818.8	ENSMUSG00000036099.17	Vezt	chr10	protein_coding	vezatin, adherens junctions transmembrane protein
chr10	93842956	93871363	-	93842956	93871532	A5SS	0.33	50	50	ENSMUST00000119818.8	ENSMUSG00000036099.17	Vezt	chr10	protein_coding	vezatin, adherens junctions transmembrane protein
chr10	93829516	93836213	-	93829516;93832975	93832700;93836213	ES	0.5	50	50	ENSMUST00000047711.13	ENSMUSG00000036099.17	Vezt	chr10	protein_coding	vezatin, adherens junctions transmembrane protein
chr10	93830874	93832700	-	93829516	93832700	A3SS	0.33	50	50	ENSMUST00000047711.13	ENSMUSG00000036099.17	Vezt	chr10	protein_coding	vezatin, adherens junctions transmembrane protein
chr10	93809471	93809697	-	93807569	93809697	A3SS	0.25	50	50	ENSMUST00000118077.8	ENSMUSG00000036099.17	Vezt	chr10	protein_coding	vezatin, adherens junctions transmembrane protein
chr10	93842956	93871363	-	93842956	93856490	5pMXE	0.33	50	50	ENSMUST00000150344.2	ENSMUSG00000036099.17	Vezt	chr10	protein_coding	vezatin, adherens junctions transmembrane protein
chr10	93908483	93910045	+	93881495	93910045	A5SS	0.5	50	50	ENSMUST00000020208.5	ENSMUSG00000020021.5	Fgd6	chr10	protein_coding	FYVE, RhoGEF and PH domain containing 6
chr10	93969244	93969863	+	93969244	93973298	A3SS	0.5	50	50	ENSMUST00000125535.2	ENSMUSG00000020021.5	Fgd6	chr10	protein_coding	FYVE, RhoGEF and PH domain containing 6
chr10	93970981	93973298	+	93969244	93973298	A5SS	0.5	50	50	ENSMUST00000125535.2	ENSMUSG00000020021.5	Fgd6	chr10	protein_coding	FYVE, RhoGEF and PH domain containing 6
chr10	93984998	93992769	+	93983964	93992769	A5SS	0.5	50	50	ENSMUST00000105290.9	ENSMUSG00000005897.15	Nr2c1	chr10	protein_coding	nuclear receptor subfamily 2, group C, member 1
chr10	94039237	94056543	+	94039237;94051261	94051201;94056543	ES	0.5	50	50	ENSMUST00000135292.3	ENSMUSG00000020022.18	Ndufa12	chr10	protein_coding	NADH:ubiquinone oxidoreductase subunit A12
chr10	94148064	94165935	+	94148064	94266385	A3SS	0.5	50	50	ENSMUST00000147869.2	ENSMUSG00000020023.19	Tmcc3	chr10	protein_coding	transmembrane and coiled coil domains 3
chr10	94350966	94414285	+	94266501	94414285	A5SS	0.14	50	50	ENSMUST00000132743.3	ENSMUSG00000020023.19	Tmcc3	chr10	protein_coding	transmembrane and coiled coil domains 3
chr10	94381430	94414285	+	94266501	94414285	A5SS	0.14	50	50	ENSMUST00000132743.3	ENSMUSG00000020023.19	Tmcc3	chr10	protein_coding	transmembrane and coiled coil domains 3
chr10	94386838	94414285	+	94266501	94414285	A5SS	0.14	50	50	ENSMUST00000132743.3	ENSMUSG00000020023.19	Tmcc3	chr10	protein_coding	transmembrane and coiled coil domains 3
chr10	94386888	94414285	+	94266501	94414285	A5SS	0.14	50	50	ENSMUST00000132743.3	ENSMUSG00000020023.19	Tmcc3	chr10	protein_coding	transmembrane and coiled coil domains 3
chr10	94411289	94414285	+	94266501	94414285	A5SS	0.14	50	50	ENSMUST00000132743.3	ENSMUSG00000020023.19	Tmcc3	chr10	protein_coding	transmembrane and coiled coil domains 3
chr10	94412314	94414285	+	94266501	94414285	A5SS	0.14	50	50	ENSMUST00000132743.3	ENSMUSG00000020023.19	Tmcc3	chr10	protein_coding	transmembrane and coiled coil domains 3
chr10	94381430	94414285	+	94350966	94414285	A5SS	0.14	50	50	ENSMUST00000065060.12	ENSMUSG00000020023.19	Tmcc3	chr10	protein_coding	transmembrane and coiled coil domains 3
chr10	94386838	94414285	+	94350966	94414285	A5SS	0.14	50	50	ENSMUST00000065060.12	ENSMUSG00000020023.19	Tmcc3	chr10	protein_coding	transmembrane and coiled coil domains 3
chr10	94386888	94414285	+	94350966	94414285	A5SS	0.14	50	50	ENSMUST00000065060.12	ENSMUSG00000020023.19	Tmcc3	chr10	protein_coding	transmembrane and coiled coil domains 3
chr10	94411289	94414285	+	94350966	94414285	A5SS	0.14	50	50	ENSMUST00000065060.12	ENSMUSG00000020023.19	Tmcc3	chr10	protein_coding	transmembrane and coiled coil domains 3
chr10	94412314	94414285	+	94350966	94414285	A5SS	0.14	50	50	ENSMUST00000065060.12	ENSMUSG00000020023.19	Tmcc3	chr10	protein_coding	transmembrane and coiled coil domains 3
chr10	94386838	94414285	+	94381430	94414285	A5SS	0.14	50	50	ENSMUST00000148823.3	ENSMUSG00000020023.19	Tmcc3	chr10	protein_coding	transmembrane and coiled coil domains 3
chr10	94386888	94414285	+	94381430	94414285	A5SS	0.14	50	50	ENSMUST00000148823.3	ENSMUSG00000020023.19	Tmcc3	chr10	protein_coding	transmembrane and coiled coil domains 3
chr10	94411289	94414285	+	94381430	94414285	A5SS	0.14	50	50	ENSMUST00000148823.3	ENSMUSG00000020023.19	Tmcc3	chr10	protein_coding	transmembrane and coiled coil domains 3
chr10	94412314	94414285	+	94381430	94414285	A5SS	0.14	50	50	ENSMUST00000148823.3	ENSMUSG00000020023.19	Tmcc3	chr10	protein_coding	transmembrane and coiled coil domains 3
chr10	94386838	94414285	+	94386888	94414285	A5SS	0.14	50	50	ENSMUST00000148910.3	ENSMUSG00000020023.19	Tmcc3	chr10	protein_coding	transmembrane and coiled coil domains 3
chr10	94411289	94414285	+	94386888	94414285	A5SS	0.14	50	50	ENSMUST00000148910.3	ENSMUSG00000020023.19	Tmcc3	chr10	protein_coding	transmembrane and coiled coil domains 3
chr10	94412314	94414285	+	94386888	94414285	A5SS	0.14	50	50	ENSMUST00000148910.3	ENSMUSG00000020023.19	Tmcc3	chr10	protein_coding	transmembrane and coiled coil domains 3
chr10	94411289	94414285	+	94386838	94414285	A5SS	0.14	50	50	ENSMUST00000117460.8	ENSMUSG00000020023.19	Tmcc3	chr10	protein_coding	transmembrane and coiled coil domains 3
chr10	94412314	94414285	+	94386838	94414285	A5SS	0.14	50	50	ENSMUST00000117460.8	ENSMUSG00000020023.19	Tmcc3	chr10	protein_coding	transmembrane and coiled coil domains 3
chr10	94412314	94414285	+	94411289	94414285	A5SS	0.14	50	50	ENSMUST00000121471.8	ENSMUSG00000020023.19	Tmcc3	chr10	protein_coding	transmembrane and coiled coil domains 3
chr10	94555604	94556542	+	94555604	94561509	A3SS	0.5	50	50	ENSMUST00000020212.6	ENSMUSG00000020024.8	Cep83	chr10	protein_coding	centrosomal protein 83
chr10	94584917	94586092	+	94584917	94586121	A3SS	0.5	50	50	ENSMUST00000020212.6	ENSMUSG00000020024.8	Cep83	chr10	protein_coding	centrosomal protein 83
chr10	94702860;94703413	94703311;94706837	-	94702860	94706837	cassetteExon	0.5	100	100	ENSMUST00000099337.5	ENSMUSG00000074785.6	Plxnc1	chr10	protein_coding	plexin C1
chr10	94690565	94700579	-	94688590	94700579	A3SS	0.5	50	50	ENSMUST00000099337.5	ENSMUSG00000074785.6	Plxnc1	chr10	protein_coding	plexin C1
chr10	94663179	94665153	-	94663179	94667205	A5SS	0.5	50	50	ENSMUST00000099337.5	ENSMUSG00000074785.6	Plxnc1	chr10	protein_coding	plexin C1
chr10	95048751	95158448	-	95011840	95158448	A3SS	0.25	50	50	ENSMUST00000220279.2	ENSMUSG00000045867.11	Cradd	chr10	protein_coding	CASP2 and RIPK1 domain containing adaptor with death domain
chr10	95147086	95158448	-	95011840	95158448	A3SS	0.25	50	50	ENSMUST00000220279.2	ENSMUSG00000045867.11	Cradd	chr10	protein_coding	CASP2 and RIPK1 domain containing adaptor with death domain
chr10	95157803	95158448	-	95011840	95158448	A3SS	0.25	50	50	ENSMUST00000220279.2	ENSMUSG00000045867.11	Cradd	chr10	protein_coding	CASP2 and RIPK1 domain containing adaptor with death domain
chr10	95158751	95159331	-	95158751	95159847	A5SS	0.33	50	50	ENSMUST00000053594.7	ENSMUSG00000045867.11	Cradd	chr10	protein_coding	CASP2 and RIPK1 domain containing adaptor with death domain
chr10	95158751	95159863	-	95158751	95159847	A5SS	0.33	50	50	ENSMUST00000053594.7	ENSMUSG00000045867.11	Cradd	chr10	protein_coding	CASP2 and RIPK1 domain containing adaptor with death domain
chr10	95158751	95159863	-	95158751	95159331	5pMXE	0.33	50	50	ENSMUST00000217809.2	ENSMUSG00000045867.11	Cradd	chr10	protein_coding	CASP2 and RIPK1 domain containing adaptor with death domain
chr10	95147086	95158448	-	95048751	95158448	A3SS	0.25	50	50	ENSMUST00000218761.2	ENSMUSG00000045867.11	Cradd	chr10	protein_coding	CASP2 and RIPK1 domain containing adaptor with death domain
chr10	95157803	95158448	-	95048751	95158448	A3SS	0.25	50	50	ENSMUST00000218761.2	ENSMUSG00000045867.11	Cradd	chr10	protein_coding	CASP2 and RIPK1 domain containing adaptor with death domain
chr10	95157803	95158448	-	95147086	95158448	A3SS	0.25	50	50	ENSMUST00000218651.2	ENSMUSG00000045867.11	Cradd	chr10	protein_coding	CASP2 and RIPK1 domain containing adaptor with death domain
chr10	95192220	95194129	+	95172417	95194129	A5SS	0.5	50	50	ENSMUST00000185313.2	ENSMUSG00000100550.3	2310039L15Rik	chr10	lncRNA	RIKEN cDNA 2310039L15 gene
chr10	95197946	95198809	+	95194220	95198809	A5SS	0.5	50	50	ENSMUST00000185313.2	ENSMUSG00000100550.3	2310039L15Rik	chr10	lncRNA	RIKEN cDNA 2310039L15 gene
chr10	95226507	95248521	-	95226507;95228798	95228276;95248521	ES	0.33	50	50	ENSMUST00000139210.8	ENSMUSG00000020027.19	Socs2	chr10	protein_coding	suppressor of cytokine signaling 2
chr10	95246617	95248521	-	95228798	95248521	A3SS	0.33	50	50	ENSMUST00000139210.8	ENSMUSG00000020027.19	Socs2	chr10	protein_coding	suppressor of cytokine signaling 2
chr10	95228798	95248521	-	95226507	95248521	A3SS	0.33	50	50	ENSMUST00000128854.2	ENSMUSG00000020027.19	Socs2	chr10	protein_coding	suppressor of cytokine signaling 2
chr10	95246617	95248521	-	95226507	95248521	A3SS	0.33	50	50	ENSMUST00000128854.2	ENSMUSG00000020027.19	Socs2	chr10	protein_coding	suppressor of cytokine signaling 2
chr10	95226507	95228276	-	95226507	95248521	A5SS	0.5	50	50	ENSMUST00000128854.2	ENSMUSG00000020027.19	Socs2	chr10	protein_coding	suppressor of cytokine signaling 2
chr10	95251053	95251484	-	95251053	95251176	5pMXE	0.2	50	50	ENSMUST00000172070.8	ENSMUSG00000020027.19	Socs2	chr10	protein_coding	suppressor of cytokine signaling 2
chr10	95251053	95251862	-	95251053	95251176	5pMXE	0.2	50	50	ENSMUST00000172070.8	ENSMUSG00000020027.19	Socs2	chr10	protein_coding	suppressor of cytokine signaling 2
chr10	95251053	95252480	-	95251053	95251176	5pMXE	0.2	50	50	ENSMUST00000172070.8	ENSMUSG00000020027.19	Socs2	chr10	protein_coding	suppressor of cytokine signaling 2
chr10	95251053	95253008	-	95251053	95251176	5pMXE	0.2	50	50	ENSMUST00000172070.8	ENSMUSG00000020027.19	Socs2	chr10	protein_coding	suppressor of cytokine signaling 2
chr10	95249453	95250693	-	95248972	95250693	A3SS	0.5	50	50	ENSMUST00000172070.8	ENSMUSG00000020027.19	Socs2	chr10	protein_coding	suppressor of cytokine signaling 2
chr10	95248972	95250507	-	95248972	95250693	A5SS	0.5	50	50	ENSMUST00000172070.8	ENSMUSG00000020027.19	Socs2	chr10	protein_coding	suppressor of cytokine signaling 2
chr10	95251053	95252480	-	95251053	95251862	5pMXE	0.2	50	50	ENSMUST00000170690.8	ENSMUSG00000020027.19	Socs2	chr10	protein_coding	suppressor of cytokine signaling 2
chr10	95251053	95253008	-	95251053	95251862	5pMXE	0.2	50	50	ENSMUST00000170690.8	ENSMUSG00000020027.19	Socs2	chr10	protein_coding	suppressor of cytokine signaling 2
chr10	95251053	95251484	-	95251053	95251862	A5SS	0.2	50	50	ENSMUST00000170690.8	ENSMUSG00000020027.19	Socs2	chr10	protein_coding	suppressor of cytokine signaling 2
chr10	95251053	95253008	-	95251053	95252480	5pMXE	0.2	50	50	ENSMUST00000020215.16	ENSMUSG00000020027.19	Socs2	chr10	protein_coding	suppressor of cytokine signaling 2
chr10	95251053	95251484	-	95251053	95252480	A5SS	0.2	50	50	ENSMUST00000020215.16	ENSMUSG00000020027.19	Socs2	chr10	protein_coding	suppressor of cytokine signaling 2
chr10	95251053	95251484	-	95251053	95253008	A5SS	0.2	50	50	ENSMUST00000135822.8	ENSMUSG00000020027.19	Socs2	chr10	protein_coding	suppressor of cytokine signaling 2
chr10	95326274	95329493	-	95326274;95326443	95326397;95329493	ES	0.33	50	50	ENSMUST00000219019.2	ENSMUSG00000062981.6	Mrpl42	chr10	protein_coding	mitochondrial ribosomal protein L42
chr10	95316839	95329493	-	95316839;95326274	95326108;95329493	ES	0.33	50	50	ENSMUST00000075829.3	ENSMUSG00000062981.6	Mrpl42	chr10	protein_coding	mitochondrial ribosomal protein L42
chr10	95336384	95337768	-	95336384	95337752	A5SS	0.5	50	50	ENSMUST00000075829.3	ENSMUSG00000062981.6	Mrpl42	chr10	protein_coding	mitochondrial ribosomal protein L42
chr10	95316839;95326443	95326108;95329493	-	95316839	95329493	cassetteExon	0.5	100	100	ENSMUST00000217777.2	ENSMUSG00000062981.6	Mrpl42	chr10	protein_coding	mitochondrial ribosomal protein L42
chr10	95377313	95378134	+	95377313;95377640	95377500;95378134	ES	0.5	50	50	ENSMUST00000099329.5	ENSMUSG00000074781.6	Ube2n	chr10	protein_coding	ubiquitin-conjugating enzyme E2N
chr10	95351639	95377067	+	95351099	95377067	A5SS	0.5	50	50	ENSMUST00000099329.5	ENSMUSG00000074781.6	Ube2n	chr10	protein_coding	ubiquitin-conjugating enzyme E2N
chr10	95377240	95377500	+	95377313	95377500	A5SS	0.5	50	50	ENSMUST00000099329.5	ENSMUSG00000074781.6	Ube2n	chr10	protein_coding	ubiquitin-conjugating enzyme E2N
chr10	95377313	95378134	+	95377640	95378134	A5SS&ES	0.5	50	50	ENSMUST00000220127.2	ENSMUSG00000074781.6	Ube2n	chr10	protein_coding	ubiquitin-conjugating enzyme E2N
chr10	95377313	95378134	+	95377313	95377500	3pMXE	0.5	50	50	ENSMUST00000220428.2	ENSMUSG00000074781.6	Ube2n	chr10	protein_coding	ubiquitin-conjugating enzyme E2N
chr10	95555518	95558000	-	95555518;95556163	95556051;95558000	ES	0.5	50	50	ENSMUST00000218396.2	ENSMUSG00000112289.2	1110019B22Rik	chr10	lncRNA	RIKEN cDNA 1110019B22 gene
chr10	95567364	95570677	+	95566279	95570677	A5SS	0.5	50	50	ENSMUST00000218485.2	ENSMUSG00000112188.2	Gm47708	chr10	lncRNA	predicted gene, 47708
chr10	95616488	95627546	+	95616488;95619845	95619590;95627546	ES	0.5	50	50	ENSMUST00000187483.7	ENSMUSG00000101517.7	4732465J04Rik	chr10	lncRNA	RIKEN cDNA 4732465J04 gene
chr10	95614931	95616371	+	95609520	95616371	A5SS	0.5	50	50	ENSMUST00000187483.7	ENSMUSG00000101517.7	4732465J04Rik	chr10	lncRNA	RIKEN cDNA 4732465J04 gene
chr10	95661846	95678705	-	95661846	95663899	A5SS&ES	0.5	50	50	ENSMUST00000211096.2	ENSMUSG00000110353.2	Gm33543	chr10	protein_coding	predicted gene, 33543
chr10	95809940;95825551	95825424;95826117	+	95809940	95826117	cassetteExon	0.5	100	100	ENSMUST00000218291.2	ENSMUSG00000036499.10	Eea1	chr10	protein_coding	early endosome antigen 1
chr10	95809940	95814023	+	95809940	95826117	A3SS	0.33	50	50	ENSMUST00000218291.2	ENSMUSG00000036499.10	Eea1	chr10	protein_coding	early endosome antigen 1
chr10	95826327	95829092	+	95826327	95829286	A3SS	0.5	50	50	ENSMUST00000218291.2	ENSMUSG00000036499.10	Eea1	chr10	protein_coding	early endosome antigen 1
chr10	95809940	95825424	+	95809940;95814148	95814023;95825424	ES	0.5	50	50	ENSMUST00000218088.2	ENSMUSG00000036499.10	Eea1	chr10	protein_coding	early endosome antigen 1
chr10	96062472	96063114	+	96062472	96080431	A3SS	0.5	50	50	ENSMUST00000218720.2	ENSMUSG00000112762.2	4930459C07Rik	chr10	lncRNA	RIKEN cDNA 4930459C07 gene
chr10	96075980	96080431	+	96062472	96080431	A5SS	0.5	50	50	ENSMUST00000218720.2	ENSMUSG00000112762.2	4930459C07Rik	chr10	lncRNA	RIKEN cDNA 4930459C07 gene
chr10	96453690	96454138	+	96453334	96454138	A5SS	0.5	50	50	ENSMUST00000038377.9	ENSMUSG00000036478.9	Btg1	chr10	protein_coding	BTG anti-proliferation factor 1
chr10	96871686	96875083	+	96871686	96874971	A3SS	0.5	50	50	ENSMUST00000219466.2	ENSMUSG00000111924.2	4930556N09Rik	chr10	lncRNA	RIKEN cDNA 4930556N09 gene
chr10	97318409	97319201	+	97315651	97319201	A5SS	0.33	50	50	ENSMUST00000105287.11	ENSMUSG00000019929.17	Dcn	chr10	protein_coding	decorin
chr10	97318878	97319201	+	97315651	97319201	A5SS	0.33	50	50	ENSMUST00000105287.11	ENSMUSG00000019929.17	Dcn	chr10	protein_coding	decorin
chr10	97318878	97319201	+	97318409	97319201	A5SS	0.33	50	50	ENSMUST00000163448.4	ENSMUSG00000019929.17	Dcn	chr10	protein_coding	decorin
chr10	97552379	97555098	+	97552379	97589226	A3SS	0.5	50	50	ENSMUST00000217919.2	ENSMUSG00000112497.2	4930525C09Rik	chr10	lncRNA	RIKEN cDNA 4930525C09 gene
chr10	98373494	98402732	+	98373494;98399089	98398959;98402732	ES	0.33	50	50	ENSMUST00000219170.2	ENSMUSG00000112874.2	Gm34297	chr10	lncRNA	predicted gene, 34297
chr10	98373494;98390005	98389925;98398959	+	98373494	98398959	cassetteExon	0.5	100	100	ENSMUST00000219170.2	ENSMUSG00000112874.2	Gm34297	chr10	lncRNA	predicted gene, 34297
chr10	98373494;98390005	98389925;98402732	+	98373494;98399089	98398959;98402732	MXE	0.5	100	100	ENSMUST00000219170.2	ENSMUSG00000112874.2	Gm34297	chr10	lncRNA	predicted gene, 34297
chr10	98390005	98402732	+	98390005;98399089	98398959;98402732	ES	0.33	50	50	ENSMUST00000218569.2	ENSMUSG00000112874.2	Gm34297	chr10	lncRNA	predicted gene, 34297
chr10	98373494	98402732	+	98373494;98390005	98389925;98402732	ES	0.33	50	50	ENSMUST00000219569.2	ENSMUSG00000112874.2	Gm34297	chr10	lncRNA	predicted gene, 34297
chr10	98751233	98804556	+	98750655	98804556	A5SS	0.33	50	50	ENSMUST00000219557.2	ENSMUSG00000019943.11	Atp2b1	chr10	protein_coding	ATPase, Ca++ transporting, plasma membrane 1
chr10	98751406	98804556	+	98750655	98804556	A5SS	0.33	50	50	ENSMUST00000219557.2	ENSMUSG00000019943.11	Atp2b1	chr10	protein_coding	ATPase, Ca++ transporting, plasma membrane 1
chr10	98854759;98855226	98855140;98858670	+	98854759	98858670	cassetteExon	0.5	100	100	ENSMUST00000020107.8	ENSMUSG00000019943.11	Atp2b1	chr10	protein_coding	ATPase, Ca++ transporting, plasma membrane 1
chr10	98854759;98855293	98855140;98858670	+	98854759	98858670	cassetteExon	0.5	100	100	ENSMUST00000020107.8	ENSMUSG00000019943.11	Atp2b1	chr10	protein_coding	ATPase, Ca++ transporting, plasma membrane 1
chr10	98854759	98859094	+	98854759	98858670	A3SS	0.33	50	50	ENSMUST00000020107.8	ENSMUSG00000019943.11	Atp2b1	chr10	protein_coding	ATPase, Ca++ transporting, plasma membrane 1
chr10	98751406	98804556	+	98751233	98804556	A5SS	0.33	50	50	ENSMUST00000020107.8	ENSMUSG00000019943.11	Atp2b1	chr10	protein_coding	ATPase, Ca++ transporting, plasma membrane 1
chr10	98854759	98859094	+	98854759	98855140	A3SS&ES	0.33	50	50	ENSMUST00000220124.2	ENSMUSG00000019943.11	Atp2b1	chr10	protein_coding	ATPase, Ca++ transporting, plasma membrane 1
chr10	98855226	98858670	+	98855293	98858670	A5SS	0.33	50	50	ENSMUST00000220124.2	ENSMUSG00000019943.11	Atp2b1	chr10	protein_coding	ATPase, Ca++ transporting, plasma membrane 1
chr10	98854759	98858670	+	98855226	98858670	5pMXE	0.33	50	50	ENSMUST00000218419.2	ENSMUSG00000019943.11	Atp2b1	chr10	protein_coding	ATPase, Ca++ transporting, plasma membrane 1
chr10	98992213	99028644	+	98992213;99000811	99000731;99028644	ES	0.33	50	50	ENSMUST00000020113.15	ENSMUSG00000019952.16	Poc1b	chr10	protein_coding	POC1 centriolar protein B
chr10	98965524;98970329	98970173;98980097	+	98965524	98980097	cassetteExon	0.5	100	100	ENSMUST00000020113.15	ENSMUSG00000019952.16	Poc1b	chr10	protein_coding	POC1 centriolar protein B
chr10	98992213;99000469	99000448;99000731	+	98992213	99000731	cassetteExon	0.5	100	100	ENSMUST00000020113.15	ENSMUSG00000019952.16	Poc1b	chr10	protein_coding	POC1 centriolar protein B
chr10	98943738	98944386	+	98943738	98960693	A3SS	0.5	50	50	ENSMUST00000020113.15	ENSMUSG00000019952.16	Poc1b	chr10	protein_coding	POC1 centriolar protein B
chr10	99007195	99028644	+	99000811	99028644	A5SS	0.33	50	50	ENSMUST00000020113.15	ENSMUSG00000019952.16	Poc1b	chr10	protein_coding	POC1 centriolar protein B
chr10	99028884	99032488	+	99028859	99032488	A5SS	0.5	50	50	ENSMUST00000020113.15	ENSMUSG00000019952.16	Poc1b	chr10	protein_coding	POC1 centriolar protein B
chr10	98992213;99000811	99000448;99028644	+	98992213	99028644	cassetteExon	0.5	100	100	ENSMUST00000159228.8	ENSMUSG00000019952.16	Poc1b	chr10	protein_coding	POC1 centriolar protein B
chr10	99007195	99028644	+	98992213	99028644	A5SS	0.33	50	50	ENSMUST00000159228.8	ENSMUSG00000019952.16	Poc1b	chr10	protein_coding	POC1 centriolar protein B
chr10	99058298;99062300	99062177;99062567	-	99058298	99062567	cassetteExon	0.5	100	100	ENSMUST00000219984.2	ENSMUSG00000112805.2	Gm34574	chr10	lncRNA	predicted gene, 34574
chr10	99056453	99058147	-	99055687	99058147	A3SS	0.5	50	50	ENSMUST00000219984.2	ENSMUSG00000112805.2	Gm34574	chr10	lncRNA	predicted gene, 34574
chr10	99099953	99101854	+	99099953;99100843	99100406;99101854	ES	0.33	50	50	ENSMUST00000020118.5	ENSMUSG00000019960.9	Dusp6	chr10	protein_coding	dual specificity phosphatase 6
chr10	99101570	99101854	+	99100843	99101854	A5SS	0.33	50	50	ENSMUST00000020118.5	ENSMUSG00000019960.9	Dusp6	chr10	protein_coding	dual specificity phosphatase 6
chr10	99101570	99101854	+	99099953	99101854	A5SS	0.33	50	50	ENSMUST00000220291.2	ENSMUSG00000019960.9	Dusp6	chr10	protein_coding	dual specificity phosphatase 6
chr10	99099953	99101854	+	99100843	99101854	5pMXE	0.33	50	50	ENSMUST00000219988.2	ENSMUSG00000019960.9	Dusp6	chr10	protein_coding	dual specificity phosphatase 6
chr10	99110877	99112896	+	99110877	99114549	A3SS	0.5	50	50	ENSMUST00000217893.2	ENSMUSG00000112544.2	Gm48089	chr10	lncRNA	predicted gene, 48089
chr10	99110675	99110772	+	99103834	99110772	A5SS	0.5	50	50	ENSMUST00000217893.2	ENSMUSG00000112544.2	Gm48089	chr10	lncRNA	predicted gene, 48089
chr10	99135264	99186945	+	99135264	99238676	A3SS	0.5	50	50	ENSMUST00000189035.2	ENSMUSG00000044633.5	B530045E10Rik	chr10	lncRNA	RIKEN cDNA B530045E10 gene
chr10	99238742	99248469	+	99238742	99256354	A3SS	0.5	50	50	ENSMUST00000189035.2	ENSMUSG00000044633.5	B530045E10Rik	chr10	lncRNA	RIKEN cDNA B530045E10 gene
chr10	99295904	99319614	+	99295904	99296819	3pMXE	0.5	50	50	ENSMUST00000220432.2	ENSMUSG00000112265.2	Gm34983	chr10	lncRNA	predicted gene, 34983
chr10	99915992	99923209	+	99915992;99916802	99916719;99923209	ES	0.33	50	50	ENSMUST00000105283.9	ENSMUSG00000019966.19	Kitl	chr10	protein_coding	kit ligand
chr10	99887821	99891627	+	99887821	99899946	A3SS	0.5	50	50	ENSMUST00000105283.9	ENSMUSG00000019966.19	Kitl	chr10	protein_coding	kit ligand
chr10	99852017	99887708	+	99851897	99887708	A5SS	0.5	50	50	ENSMUST00000105283.9	ENSMUSG00000019966.19	Kitl	chr10	protein_coding	kit ligand
chr10	99851897	99887708	+	99851897	99923209	A3SS	0.5	50	50	ENSMUST00000218200.2	ENSMUSG00000019966.19	Kitl	chr10	protein_coding	kit ligand
chr10	99915992	99923209	+	99851897	99923209	A5SS	0.33	50	50	ENSMUST00000218200.2	ENSMUSG00000019966.19	Kitl	chr10	protein_coding	kit ligand
chr10	99916802	99923209	+	99851897	99923209	A5SS	0.33	50	50	ENSMUST00000218200.2	ENSMUSG00000019966.19	Kitl	chr10	protein_coding	kit ligand
chr10	100313884;100320987	100320913;100323024	-	100313884	100323024	cassetteExon	0.5	100	100	ENSMUST00000058154.15	ENSMUSG00000036676.15	Tmtc3	chr10	protein_coding	transmembrane and tetratricopeptide repeat containing 3
chr10	100313884;100321047	100320913;100323024	-	100313884	100323024	cassetteExon	0.5	100	100	ENSMUST00000058154.15	ENSMUSG00000036676.15	Tmtc3	chr10	protein_coding	transmembrane and tetratricopeptide repeat containing 3
chr10	100321047	100323024	-	100320987	100323024	A3SS	0.33	50	50	ENSMUST00000128009.2	ENSMUSG00000036676.15	Tmtc3	chr10	protein_coding	transmembrane and tetratricopeptide repeat containing 3
chr10	100330816	100331685	+	100330816;100331523	100331503;100331685	ES	0.5	50	50	ENSMUST00000220346.2	ENSMUSG00000019971.11	Cep290	chr10	protein_coding	centrosomal protein 290
chr10	100380325	100380779	+	100379303	100380779	A5SS	0.5	50	50	ENSMUST00000220346.2	ENSMUSG00000019971.11	Cep290	chr10	protein_coding	centrosomal protein 290
chr10	100413220	100419776	-	100413220;100414293	100414177;100419776	ES	0.33	50	50	ENSMUST00000054471.10	ENSMUSG00000046567.11	4930430F08Rik	chr10	protein_coding	RIKEN cDNA 4930430F08 gene
chr10	100422170	100426222	-	100422170	100424889	5pMXE	0.33	50	50	ENSMUST00000054471.10	ENSMUSG00000046567.11	4930430F08Rik	chr10	protein_coding	RIKEN cDNA 4930430F08 gene
chr10	100414293;100418184	100418125;100419776	-	100414293	100419776	cassetteExon	0.5	100	100	ENSMUST00000054471.10	ENSMUSG00000046567.11	4930430F08Rik	chr10	protein_coding	RIKEN cDNA 4930430F08 gene
chr10	100422170	100424706	-	100422170	100424889	A5SS	0.33	50	50	ENSMUST00000054471.10	ENSMUSG00000046567.11	4930430F08Rik	chr10	protein_coding	RIKEN cDNA 4930430F08 gene
chr10	100422170	100424706	-	100422170	100426222	A5SS	0.33	50	50	ENSMUST00000219410.2	ENSMUSG00000046567.11	4930430F08Rik	chr10	protein_coding	RIKEN cDNA 4930430F08 gene
chr10	100418184	100419776	-	100413220	100419776	A3SS	0.33	50	50	ENSMUST00000218328.2	ENSMUSG00000046567.11	4930430F08Rik	chr10	protein_coding	RIKEN cDNA 4930430F08 gene
chr10	100413220	100419776	-	100414293	100419776	3pMXE	0.33	50	50	ENSMUST00000219698.2	ENSMUSG00000046567.11	4930430F08Rik	chr10	protein_coding	RIKEN cDNA 4930430F08 gene
chr10	100445116	100448291	+	100445116;100446577	100446458;100448291	ES	0.5	50	50	ENSMUST00000218464.2	ENSMUSG00000056912.13	1700017N19Rik	chr10	protein_coding	RIKEN cDNA 1700017N19 gene
chr10	100426507	100427589	+	100426507	100427740	A3SS	0.5	50	50	ENSMUST00000218464.2	ENSMUSG00000056912.13	1700017N19Rik	chr10	protein_coding	RIKEN cDNA 1700017N19 gene
chr10	100431017	100437875	+	100431017	100437726	A3SS	0.5	50	50	ENSMUST00000218464.2	ENSMUSG00000056912.13	1700017N19Rik	chr10	protein_coding	RIKEN cDNA 1700017N19 gene
chr10	100445116	100446461	+	100445116	100446458	A3SS	0.33	50	50	ENSMUST00000218464.2	ENSMUSG00000056912.13	1700017N19Rik	chr10	protein_coding	RIKEN cDNA 1700017N19 gene
chr10	100448395	100448615	+	100448395	100448612	A3SS	0.5	50	50	ENSMUST00000218464.2	ENSMUSG00000056912.13	1700017N19Rik	chr10	protein_coding	RIKEN cDNA 1700017N19 gene
chr10	100428291	100430399	+	100427776	100430399	A5SS	0.33	50	50	ENSMUST00000218464.2	ENSMUSG00000056912.13	1700017N19Rik	chr10	protein_coding	RIKEN cDNA 1700017N19 gene
chr10	100428291	100430897	+	100430518	100430897	A5SS&ES	0.5	50	50	ENSMUST00000218464.2	ENSMUSG00000056912.13	1700017N19Rik	chr10	protein_coding	RIKEN cDNA 1700017N19 gene
chr10	100428558	100430399	+	100427776	100430399	A5SS	0.33	50	50	ENSMUST00000218464.2	ENSMUSG00000056912.13	1700017N19Rik	chr10	protein_coding	RIKEN cDNA 1700017N19 gene
chr10	100428291	100430897	+	100428291;100430518	100430399;100430897	ES	0.5	50	50	ENSMUST00000187119.7	ENSMUSG00000056912.13	1700017N19Rik	chr10	protein_coding	RIKEN cDNA 1700017N19 gene
chr10	100445116;100446577	100446461;100448291	+	100445116	100448291	cassetteExon	0.5	100	100	ENSMUST00000187119.7	ENSMUSG00000056912.13	1700017N19Rik	chr10	protein_coding	RIKEN cDNA 1700017N19 gene
chr10	100428558	100430399	+	100428291	100430399	A5SS	0.33	50	50	ENSMUST00000187119.7	ENSMUSG00000056912.13	1700017N19Rik	chr10	protein_coding	RIKEN cDNA 1700017N19 gene
chr10	101699891;101725290	101725164;101847594	+	101699891	101847594	cassetteExon	0.5	100	100	ENSMUST00000146230.8	ENSMUSG00000019888.17	Mgat4c	chr10	protein_coding	MGAT4 family, member C
chr10	102186845	102214013	+	102186845;102206254	102206194;102214013	ES	0.33	50	50	ENSMUST00000179929.8	ENSMUSG00000019888.17	Mgat4c	chr10	protein_coding	MGAT4 family, member C
chr10	101847705	101927352	+	101847705	102032889	A3SS	0.33	50	50	ENSMUST00000179929.8	ENSMUSG00000019888.17	Mgat4c	chr10	protein_coding	MGAT4 family, member C
chr10	101847705	102186796	+	101847705	102032889	A3SS&ES	0.33	50	50	ENSMUST00000179929.8	ENSMUSG00000019888.17	Mgat4c	chr10	protein_coding	MGAT4 family, member C
chr10	102186845	102206150	+	102186845	102206194	A3SS	0.33	50	50	ENSMUST00000179929.8	ENSMUSG00000019888.17	Mgat4c	chr10	protein_coding	MGAT4 family, member C
chr10	102206254	102213471	+	102206254	102214013	A3SS	0.5	50	50	ENSMUST00000179929.8	ENSMUSG00000019888.17	Mgat4c	chr10	protein_coding	MGAT4 family, member C
chr10	102210505	102214013	+	102206254	102214013	A5SS	0.33	50	50	ENSMUST00000179929.8	ENSMUSG00000019888.17	Mgat4c	chr10	protein_coding	MGAT4 family, member C
chr10	101847705;101927416	101927352;102186796	+	101847705	102186796	cassetteExon	0.5	100	100	ENSMUST00000219195.2	ENSMUSG00000019888.17	Mgat4c	chr10	protein_coding	MGAT4 family, member C
chr10	101994920	102186796	+	101847705	102186796	A5SS	0.25	50	50	ENSMUST00000219195.2	ENSMUSG00000019888.17	Mgat4c	chr10	protein_coding	MGAT4 family, member C
chr10	101995014	102186796	+	101847705	102186796	A5SS	0.25	50	50	ENSMUST00000219195.2	ENSMUSG00000019888.17	Mgat4c	chr10	protein_coding	MGAT4 family, member C
chr10	101994920	102186796	+	101927416	102186796	A5SS	0.25	50	50	ENSMUST00000134930.8	ENSMUSG00000019888.17	Mgat4c	chr10	protein_coding	MGAT4 family, member C
chr10	101995014	102186796	+	101927416	102186796	A5SS	0.25	50	50	ENSMUST00000134930.8	ENSMUSG00000019888.17	Mgat4c	chr10	protein_coding	MGAT4 family, member C
chr10	102186845;102206254	102206150;102214013	+	102186845	102214013	cassetteExon	0.5	100	100	ENSMUST00000127504.9	ENSMUSG00000019888.17	Mgat4c	chr10	protein_coding	MGAT4 family, member C
chr10	102210505	102214013	+	102186845	102214013	A5SS	0.33	50	50	ENSMUST00000127504.9	ENSMUSG00000019888.17	Mgat4c	chr10	protein_coding	MGAT4 family, member C
chr10	101994920	102013519	+	101994920	102186796	A3SS	0.25	50	50	ENSMUST00000138522.8	ENSMUSG00000019888.17	Mgat4c	chr10	protein_coding	MGAT4 family, member C
chr10	101994920	102041945	+	101994920	102186796	A3SS	0.25	50	50	ENSMUST00000138522.8	ENSMUSG00000019888.17	Mgat4c	chr10	protein_coding	MGAT4 family, member C
chr10	101994920	102078715	+	101994920	102186796	A3SS	0.25	50	50	ENSMUST00000138522.8	ENSMUSG00000019888.17	Mgat4c	chr10	protein_coding	MGAT4 family, member C
chr10	101995014	102186796	+	101994920	102186796	A5SS	0.25	50	50	ENSMUST00000138522.8	ENSMUSG00000019888.17	Mgat4c	chr10	protein_coding	MGAT4 family, member C
chr10	101994920	102041945	+	101994920	102013519	A3SS&ES	0.33	50	50	ENSMUST00000130580.3	ENSMUSG00000019888.17	Mgat4c	chr10	protein_coding	MGAT4 family, member C
chr10	101994920	102078715	+	101994920	102013519	A3SS&ES	0.33	50	50	ENSMUST00000130580.3	ENSMUSG00000019888.17	Mgat4c	chr10	protein_coding	MGAT4 family, member C
chr10	102013641	102018661	+	102013641	102109225	A3SS	0.5	50	50	ENSMUST00000130580.3	ENSMUSG00000019888.17	Mgat4c	chr10	protein_coding	MGAT4 family, member C
chr10	102080631	102109225	+	102013641	102109225	A5SS	0.33	50	50	ENSMUST00000130580.3	ENSMUSG00000019888.17	Mgat4c	chr10	protein_coding	MGAT4 family, member C
chr10	102092429	102109225	+	102013641	102109225	A5SS	0.33	50	50	ENSMUST00000130580.3	ENSMUSG00000019888.17	Mgat4c	chr10	protein_coding	MGAT4 family, member C
chr10	102080631	102109225	+	102080631;102092429	102092351;102109225	ES	0.33	50	50	ENSMUST00000219683.2	ENSMUSG00000019888.17	Mgat4c	chr10	protein_coding	MGAT4 family, member C
chr10	101994920;102013641	102013519;102109225	+	101994920;102092429	102078715;102109225	MXE	0.5	100	100	ENSMUST00000219683.2	ENSMUSG00000019888.17	Mgat4c	chr10	protein_coding	MGAT4 family, member C
chr10	101994920	102041945	+	101994920	102078715	A3SS	0.33	50	50	ENSMUST00000219683.2	ENSMUSG00000019888.17	Mgat4c	chr10	protein_coding	MGAT4 family, member C
chr10	102018753	102080525	+	102078850	102080525	A5SS&ES	0.5	50	50	ENSMUST00000219683.2	ENSMUSG00000019888.17	Mgat4c	chr10	protein_coding	MGAT4 family, member C
chr10	101994920;102078850	102078715;102080525	+	101994920;102018753	102013519;102080525	MXE	0.5	100	100	ENSMUST00000218554.2	ENSMUSG00000019888.17	Mgat4c	chr10	protein_coding	MGAT4 family, member C
chr10	101994920;102013641	102013519;102109225	+	101994920;102080631	102041945;102109225	MXE	0.5	100	100	ENSMUST00000143640.2	ENSMUSG00000019888.17	Mgat4c	chr10	protein_coding	MGAT4 family, member C
chr10	102376242	102380667	+	102348445	102380667	A5SS	0.5	50	50	ENSMUST00000219445.2	ENSMUSG00000044921.6	Rassf9	chr10	protein_coding	Ras association (RalGDS/AF-6) domain family (N-terminal) member 9
chr10	102519257	102529703	+	102519257;102526787	102526680;102529703	ES	0.5	50	50	ENSMUST00000218188.2	ENSMUSG00000112845.2	Gm47143	chr10	lncRNA	predicted gene, 47143
chr10	102845369;102857849	102857474;102858038	-	102845369	102858038	cassetteExon	0.5	100	100	ENSMUST00000217946.2	ENSMUSG00000036602.15	Alx1	chr10	protein_coding	ALX homeobox 1
chr10	102858166	102858310	-	102858166	102860996	A5SS	0.5	50	50	ENSMUST00000217946.2	ENSMUSG00000036602.15	Alx1	chr10	protein_coding	ALX homeobox 1
chr10	102864708	102864829	-	102864708	102864791	A5SS	0.5	50	50	ENSMUST00000217946.2	ENSMUSG00000036602.15	Alx1	chr10	protein_coding	ALX homeobox 1
chr10	103070018	103071881	-	103070018	103072137	A5SS	0.5	50	50	ENSMUST00000166240.8	ENSMUSG00000019892.14	Lrriq1	chr10	protein_coding	leucine-rich repeats and IQ motif containing 1
chr10	103204014;103205329	103205233;103224888	+	103204014	103224888	cassetteExon	0.5	100	100	ENSMUST00000179636.3	ENSMUSG00000019894.15	Slc6a15	chr10	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 15
chr10	103204014	103224758	+	103204014	103224888	A3SS	0.33	50	50	ENSMUST00000179636.3	ENSMUSG00000019894.15	Slc6a15	chr10	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 15
chr10	103204014	103205233	+	103204014	103224758	A3SS	0.33	50	50	ENSMUST00000217905.2	ENSMUSG00000019894.15	Slc6a15	chr10	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 15
chr10	103979307	103980178	+	103978953	103980178	A5SS	0.5	50	50	ENSMUST00000181634.8	ENSMUSG00000091779.9	Gm21293	chr10	protein_coding	predicted gene, 21293
chr10	103987817	103988687	+	103987463	103988687	A5SS	0.5	50	50	ENSMUST00000181287.5	ENSMUSG00000097427.6	Gm6763	chr10	protein_coding	predicted gene 6763
chr10	103996326	103997195	+	103995972	103997195	A5SS	0.5	50	50	ENSMUST00000181179.5	ENSMUSG00000097878.6	Gm8764	chr10	protein_coding	predicted gene 8764
chr10	104004835	104005705	+	104004481	104005705	A5SS	0.5	50	50	ENSMUST00000181059.8	ENSMUSG00000097550.8	Gm21304	chr10	protein_coding	predicted gene, 21304
chr10	104013344	104014213	+	104012990	104014213	A5SS	0.5	50	50	ENSMUST00000180889.8	ENSMUSG00000094144.9	Gm21312	chr10	protein_coding	predicted gene, 21312
chr10	104021853	104022722	+	104021499	104022722	A5SS	0.5	50	50	ENSMUST00000181703.8	ENSMUSG00000095022.9	Gm20765	chr10	protein_coding	predicted gene, 20765
chr10	104030362	104031232	+	104030008	104031232	A5SS	0.5	50	50	ENSMUST00000181615.8	ENSMUSG00000090854.10	Gm4340	chr10	protein_coding	predicted gene 4340
chr10	105026135	105079450	-	105026135	105070644	5pMXE	0.33	50	50	ENSMUST00000130665.2	ENSMUSG00000036019.9	Tmtc2	chr10	protein_coding	transmembrane and tetratricopeptide repeat containing 2
chr10	105026135	105035490	-	105026135	105070644	A5SS	0.33	50	50	ENSMUST00000130665.2	ENSMUSG00000036019.9	Tmtc2	chr10	protein_coding	transmembrane and tetratricopeptide repeat containing 2
chr10	105026135	105035490	-	105026135	105079450	A5SS	0.33	50	50	ENSMUST00000061506.9	ENSMUSG00000036019.9	Tmtc2	chr10	protein_coding	transmembrane and tetratricopeptide repeat containing 2
chr10	105249648	105371571	-	105249648	105409528	A5SS	0.5	50	50	ENSMUST00000061506.9	ENSMUSG00000036019.9	Tmtc2	chr10	protein_coding	transmembrane and tetratricopeptide repeat containing 2
chr10	105411548	105416264	+	105409978	105416264	A5SS	0.5	50	50	ENSMUST00000161364.8	ENSMUSG00000085282.9	Gm15663	chr10	lncRNA	predicted gene 15663
chr10	105668876;105669141	105668966;105676937	-	105668876	105676937	cassetteExon	0.5	100	100	ENSMUST00000046638.10	ENSMUSG00000036009.17	Mettl25	chr10	protein_coding	methyltransferase like 25
chr10	105668876;105672081	105671988;105676937	-	105668876	105676937	cassetteExon	0.5	100	100	ENSMUST00000046638.10	ENSMUSG00000036009.17	Mettl25	chr10	protein_coding	methyltransferase like 25
chr10	105675448	105676937	-	105668876	105676937	A3SS	0.25	50	50	ENSMUST00000046638.10	ENSMUSG00000036009.17	Mettl25	chr10	protein_coding	methyltransferase like 25
chr10	105668876;105672081	105671988;105676937	-	105668876;105669141	105668966;105676937	MXE	0.5	100	100	ENSMUST00000176924.8	ENSMUSG00000036009.17	Mettl25	chr10	protein_coding	methyltransferase like 25
chr10	105675448	105676937	-	105669141	105676937	A3SS	0.25	50	50	ENSMUST00000176924.8	ENSMUSG00000036009.17	Mettl25	chr10	protein_coding	methyltransferase like 25
chr10	105675448	105676937	-	105672081	105676937	A3SS	0.25	50	50	ENSMUST00000176040.2	ENSMUSG00000036009.17	Mettl25	chr10	protein_coding	methyltransferase like 25
chr10	105677434	105678403	+	105677516	105678403	A5SS	0.5	50	50	ENSMUST00000020049.9	ENSMUSG00000019897.9	Ccdc59	chr10	protein_coding	coiled-coil domain containing 59
chr10	106603409	106612276	+	106603409	106636598	A3SS	0.5	50	50	ENSMUST00000029404.17	ENSMUSG00000053825.16	Ppfia2	chr10	protein_coding	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
chr10	106699245	106701108	+	106699245	106701111	A3SS	0.5	50	50	ENSMUST00000029404.17	ENSMUSG00000053825.16	Ppfia2	chr10	protein_coding	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
chr10	106739566	106740682	+	106739566	106740678	A3SS	0.5	50	50	ENSMUST00000029404.17	ENSMUSG00000053825.16	Ppfia2	chr10	protein_coding	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
chr10	106425592	106436800	-	106425592	106429058	A5SS&ES	0.5	50	50	ENSMUST00000218463.2	ENSMUSG00000112201.2	4930532I03Rik	chr10	lncRNA	RIKEN cDNA 4930532I03 gene
chr10	106391859;106406227	106405745;106415652	-	106391859	106415652	cassetteExon	0.5	100	100	ENSMUST00000219229.2	ENSMUSG00000112201.2	4930532I03Rik	chr10	lncRNA	RIKEN cDNA 4930532I03 gene
chr10	106801916	106802809	-	106798886	106802809	A3SS	0.5	50	50	ENSMUST00000165067.9	ENSMUSG00000035948.14	Acss3	chr10	protein_coding	acyl-CoA synthetase short-chain family member 3
chr10	106943294	106959149	-	106920812	106959149	A3SS	0.5	50	50	ENSMUST00000165067.9	ENSMUSG00000035948.14	Acss3	chr10	protein_coding	acyl-CoA synthetase short-chain family member 3
chr10	107038972	107041121	-	107038972	107041077	A5SS	0.5	50	50	ENSMUST00000220167.2	ENSMUSG00000112466.2	Gm29674	chr10	lncRNA	predicted gene, 29674
chr10	107107803	107215941	+	107107803;107159890	107159772;107215941	ES	0.33	50	50	ENSMUST00000020057.16	ENSMUSG00000019906.16	Lin7a	chr10	protein_coding	lin-7 homolog A (C. elegans)
chr10	107216012;107216164	107216088;107218365	+	107216012	107218365	cassetteExon	0.5	100	100	ENSMUST00000020057.16	ENSMUSG00000019906.16	Lin7a	chr10	protein_coding	lin-7 homolog A (C. elegans)
chr10	107109125	107215941	+	107159890	107215941	A5SS&ES	0.33	50	50	ENSMUST00000020057.16	ENSMUSG00000019906.16	Lin7a	chr10	protein_coding	lin-7 homolog A (C. elegans)
chr10	107109125	107215941	+	107107803	107215941	A5SS	0.33	50	50	ENSMUST00000105280.5	ENSMUSG00000019906.16	Lin7a	chr10	protein_coding	lin-7 homolog A (C. elegans)
chr10	107481516	107482418	-	107480114	107482418	A3SS	0.5	50	50	ENSMUST00000050702.9	ENSMUSG00000035916.9	Ptprq	chr10	protein_coding	protein tyrosine phosphatase, receptor type, Q
chr10	107522514	107524192	-	107522511	107524192	A3SS	0.5	50	50	ENSMUST00000050702.9	ENSMUSG00000035916.9	Ptprq	chr10	protein_coding	protein tyrosine phosphatase, receptor type, Q
chr10	108087805	108089186	+	108087805;108088785	108088618;108089186	ES	0.5	50	50	ENSMUST00000219263.2	ENSMUSG00000019907.11	Ppp1r12a	chr10	protein_coding	protein phosphatase 1, regulatory subunit 12A
chr10	108088785	108095617	+	108088785;108089356	108089186;108095617	ES	0.5	50	50	ENSMUST00000219263.2	ENSMUSG00000019907.11	Ppp1r12a	chr10	protein_coding	protein phosphatase 1, regulatory subunit 12A
chr10	108110049	108120138	+	108110049	108113068	3pMXE	0.5	50	50	ENSMUST00000219263.2	ENSMUSG00000019907.11	Ppp1r12a	chr10	protein_coding	protein phosphatase 1, regulatory subunit 12A
chr10	108107630;108109286	108109256;108109999	+	108107630	108109999	cassetteExon	0.5	100	100	ENSMUST00000219263.2	ENSMUSG00000019907.11	Ppp1r12a	chr10	protein_coding	protein phosphatase 1, regulatory subunit 12A
chr10	108087805;108089356	108089186;108095617	+	108087805;108088785	108088618;108095617	MXE	0.5	100	100	ENSMUST00000219759.2	ENSMUSG00000019907.11	Ppp1r12a	chr10	protein_coding	protein phosphatase 1, regulatory subunit 12A
chr10	108087805	108089186	+	108088785	108089186	5pMXE	0.5	50	50	ENSMUST00000219068.2	ENSMUSG00000019907.11	Ppp1r12a	chr10	protein_coding	protein phosphatase 1, regulatory subunit 12A
chr10	108088785	108095617	+	108088785	108089186	3pMXE	0.5	50	50	ENSMUST00000219068.2	ENSMUSG00000019907.11	Ppp1r12a	chr10	protein_coding	protein phosphatase 1, regulatory subunit 12A
chr10	108088785	108095617	+	108089356	108095617	5pMXE	0.5	50	50	ENSMUST00000218161.2	ENSMUSG00000019907.11	Ppp1r12a	chr10	protein_coding	protein phosphatase 1, regulatory subunit 12A
chr10	108169172	108227559	+	108169172;108218722	108218591;108227559	ES	0.5	50	50	ENSMUST00000095313.5	ENSMUSG00000035873.9	Pawr	chr10	protein_coding	PRKC, apoptosis, WT1, regulator
chr10	108272644	108286830	+	108253166	108286830	A5SS	0.33	50	50	ENSMUST00000217857.2	ENSMUSG00000112532.2	Gm36283	chr10	lncRNA	predicted gene, 36283
chr10	108284760	108286830	+	108253166	108286830	A5SS	0.33	50	50	ENSMUST00000217857.2	ENSMUSG00000112532.2	Gm36283	chr10	lncRNA	predicted gene, 36283
chr10	108284760	108286830	+	108272644	108286830	A5SS	0.33	50	50	ENSMUST00000218418.2	ENSMUSG00000112532.2	Gm36283	chr10	lncRNA	predicted gene, 36283
chr10	108738176	108846437	-	108738176;108829778	108829699;108846437	ES	0.5	50	50	ENSMUST00000105276.8	ENSMUSG00000035864.15	Syt1	chr10	protein_coding	synaptotagmin I
chr10	108472525	108478075	-	108472534	108478075	A3SS	0.5	50	50	ENSMUST00000105276.8	ENSMUSG00000035864.15	Syt1	chr10	protein_coding	synaptotagmin I
chr10	108738176	108844753	-	108738176	108829699	A5SS&ES	0.33	50	50	ENSMUST00000105276.8	ENSMUSG00000035864.15	Syt1	chr10	protein_coding	synaptotagmin I
chr10	108738176	108844753	-	108738176	108846437	A5SS	0.33	50	50	ENSMUST00000064054.14	ENSMUSG00000035864.15	Syt1	chr10	protein_coding	synaptotagmin I
chr10	109554227	109555818	-	109554227;109554947	109554927;109555818	ES	0.5	50	50	ENSMUST00000032719.15	ENSMUSG00000020181.19	Nav3	chr10	protein_coding	neuron navigator 3
chr10	109594910	109600379	-	109594910;109596389	109596348;109600379	ES	0.5	50	50	ENSMUST00000032719.15	ENSMUSG00000020181.19	Nav3	chr10	protein_coding	neuron navigator 3
chr10	109739724	110052563	-	109739724	109835838	5pMXE	0.5	50	50	ENSMUST00000032719.15	ENSMUSG00000020181.19	Nav3	chr10	protein_coding	neuron navigator 3
chr10	109555939	109559558	-	109555939	109563692	A5SS	0.5	50	50	ENSMUST00000032719.15	ENSMUSG00000020181.19	Nav3	chr10	protein_coding	neuron navigator 3
chr10	109660542	109667754	-	109660542	109677564	A5SS	0.5	50	50	ENSMUST00000032719.15	ENSMUSG00000020181.19	Nav3	chr10	protein_coding	neuron navigator 3
chr10	110439483	110451152	+	110432274	110451152	A5SS	0.5	50	50	ENSMUST00000220061.2	ENSMUSG00000112398.2	9230102K24Rik	chr10	lncRNA	RIKEN cDNA 9230102K24 gene
chr10	110582285	110589942	+	110582285	110583904	3pMXE	0.5	50	50	ENSMUST00000173294.8	ENSMUSG00000020185.17	E2f7	chr10	protein_coding	E2F transcription factor 7
chr10	110581540	110582180	+	110581540	110582193	A3SS	0.5	50	50	ENSMUST00000173294.8	ENSMUSG00000020185.17	E2f7	chr10	protein_coding	E2F transcription factor 7
chr10	110581669	110582193	+	110581540	110582193	A5SS	0.5	50	50	ENSMUST00000173294.8	ENSMUSG00000020185.17	E2f7	chr10	protein_coding	E2F transcription factor 7
chr10	110601635;110602023	110602000;110602978	+	110601635	110602978	cassetteExon	0.5	100	100	ENSMUST00000174810.8	ENSMUSG00000020185.17	E2f7	chr10	protein_coding	E2F transcription factor 7
chr10	110590220	110591396	+	110590220	110595679	A3SS	0.5	50	50	ENSMUST00000174810.8	ENSMUSG00000020185.17	E2f7	chr10	protein_coding	E2F transcription factor 7
chr10	110637371	110728881	-	110620614	110728881	A3SS	0.33	50	50	ENSMUST00000188776.7	ENSMUSG00000101801.7	1700020G17Rik	chr10	lncRNA	RIKEN cDNA 1700020G17 gene
chr10	110672164	110728881	-	110620614	110728881	A3SS	0.33	50	50	ENSMUST00000188776.7	ENSMUSG00000101801.7	1700020G17Rik	chr10	lncRNA	RIKEN cDNA 1700020G17 gene
chr10	110672164	110728881	-	110637371	110728881	A3SS	0.33	50	50	ENSMUST00000191429.7	ENSMUSG00000101801.7	1700020G17Rik	chr10	lncRNA	RIKEN cDNA 1700020G17 gene
chr10	110672164	110728890	-	110672164	110728881	A5SS	0.5	50	50	ENSMUST00000191286.2	ENSMUSG00000101801.7	1700020G17Rik	chr10	lncRNA	RIKEN cDNA 1700020G17 gene
chr10	110771177	110774498	+	110771177;110773727	110773598;110774498	ES	0.5	50	50	ENSMUST00000020403.7	ENSMUSG00000020186.8	Csrp2	chr10	protein_coding	cysteine and glycine-rich protein 2
chr10	110767222	110767816	+	110756115	110767816	A5SS	0.5	50	50	ENSMUST00000020403.7	ENSMUSG00000020186.8	Csrp2	chr10	protein_coding	cysteine and glycine-rich protein 2
chr10	110770554	110771009	+	110767928	110771009	A5SS	0.5	50	50	ENSMUST00000020403.7	ENSMUSG00000020186.8	Csrp2	chr10	protein_coding	cysteine and glycine-rich protein 2
chr10	110771177	110774498	+	110771177	110773598	3pMXE	0.5	50	50	ENSMUST00000220054.2	ENSMUSG00000020186.8	Csrp2	chr10	protein_coding	cysteine and glycine-rich protein 2
chr10	110796998;110798265	110798158;110803545	-	110796998	110803545	cassetteExon	0.5	100	100	ENSMUST00000041723.15	ENSMUSG00000035798.15	Zdhhc17	chr10	protein_coding	zinc finger, DHHC domain containing 17
chr10	110803666	110804290	-	110803707	110804290	A3SS	0.5	50	50	ENSMUST00000041723.15	ENSMUSG00000035798.15	Zdhhc17	chr10	protein_coding	zinc finger, DHHC domain containing 17
chr10	110821904	110841445	-	110821904	110845799	A5SS	0.5	50	50	ENSMUST00000041723.15	ENSMUSG00000035798.15	Zdhhc17	chr10	protein_coding	zinc finger, DHHC domain containing 17
chr10	110796998	110803545	-	110798265	110803545	3pMXE	0.5	50	50	ENSMUST00000099285.4	ENSMUSG00000035798.15	Zdhhc17	chr10	protein_coding	zinc finger, DHHC domain containing 17
chr10	111040701	111069414	+	111040701;111060569	111060533;111069414	ES	0.5	50	50	ENSMUST00000105275.9	ENSMUSG00000020189.16	Osbpl8	chr10	protein_coding	oxysterol binding protein-like 8
chr10	111069551	111082018	+	111069551	111091549	A3SS	0.5	50	50	ENSMUST00000105275.9	ENSMUSG00000020189.16	Osbpl8	chr10	protein_coding	oxysterol binding protein-like 8
chr10	111084509	111091549	+	111069551	111091549	A5SS	0.5	50	50	ENSMUST00000105275.9	ENSMUSG00000020189.16	Osbpl8	chr10	protein_coding	oxysterol binding protein-like 8
chr10	111330685	111330912	+	111330685	111331186	A3SS	0.5	50	50	ENSMUST00000065917.16	ENSMUSG00000058799.17	Nap1l1	chr10	protein_coding	nucleosome assembly protein 1-like 1
chr10	111343812	111343921	+	111343509	111343921	A5SS	0.5	50	50	ENSMUST00000164773.2	ENSMUSG00000020205.9	Phlda1	chr10	protein_coding	pleckstrin homology like domain, family A, member 1
chr10	111618936	111629662	-	111594065	111629662	A3SS	0.33	50	50	ENSMUST00000217752.2	ENSMUSG00000112137.2	Gm47865	chr10	lncRNA	predicted gene, 47865
chr10	111624086	111629662	-	111594065	111629662	A3SS	0.33	50	50	ENSMUST00000217752.2	ENSMUSG00000112137.2	Gm47865	chr10	lncRNA	predicted gene, 47865
chr10	111624086	111629662	-	111618936	111629662	A3SS	0.33	50	50	ENSMUST00000218600.2	ENSMUSG00000112137.2	Gm47865	chr10	lncRNA	predicted gene, 47865
chr10	111815052	111818706	+	111815052;111815962	111815792;111818706	ES	0.5	50	50	ENSMUST00000163048.8	ENSMUSG00000063334.17	Krr1	chr10	protein_coding	KRR1, small subunit (SSU) processome component, homolog (yeast)
chr10	111829585	111838405	-	111829585	111832763	5pMXE	0.33	50	50	ENSMUST00000074805.12	ENSMUSG00000056888.12	Glipr1	chr10	protein_coding	GLI pathogenesis-related 1 (glioma)
chr10	111821587	111821679	-	111821587	111821683	A5SS	0.5	50	50	ENSMUST00000074805.12	ENSMUSG00000056888.12	Glipr1	chr10	protein_coding	GLI pathogenesis-related 1 (glioma)
chr10	111829585	111831395	-	111829585	111832763	A5SS	0.33	50	50	ENSMUST00000074805.12	ENSMUSG00000056888.12	Glipr1	chr10	protein_coding	GLI pathogenesis-related 1 (glioma)
chr10	111829585	111838405	-	111829585;111833156	111832763;111838405	ES	0.5	50	50	ENSMUST00000162508.9	ENSMUSG00000056888.12	Glipr1	chr10	protein_coding	GLI pathogenesis-related 1 (glioma)
chr10	111829585	111831395	-	111829585	111838405	A5SS	0.33	50	50	ENSMUST00000159550.2	ENSMUSG00000056888.12	Glipr1	chr10	protein_coding	GLI pathogenesis-related 1 (glioma)
chr10	111933896	111942722	+	111933921	111942722	A5SS	0.5	50	50	ENSMUST00000148897.8	ENSMUSG00000020214.11	Glipr1l2	chr10	protein_coding	GLI pathogenesis-related 1 like 2
chr10	112018977	112030833	+	112018977;112026976	112026857;112030833	ES	0.5	50	50	ENSMUST00000092176.8	ENSMUSG00000035694.16	Caps2	chr10	protein_coding	calcyphosphine 2
chr10	112013913	112015237	+	112013913	112015262	A3SS	0.5	50	50	ENSMUST00000092176.8	ENSMUSG00000035694.16	Caps2	chr10	protein_coding	calcyphosphine 2
chr10	112001688	112011456	+	112001692	112011456	A5SS	0.33	50	50	ENSMUST00000092176.8	ENSMUSG00000035694.16	Caps2	chr10	protein_coding	calcyphosphine 2
chr10	112011259	112011456	+	112001692	112011456	A5SS	0.33	50	50	ENSMUST00000092176.8	ENSMUSG00000035694.16	Caps2	chr10	protein_coding	calcyphosphine 2
chr10	112011259	112011456	+	112001688	112011456	A5SS	0.33	50	50	ENSMUST00000170013.2	ENSMUSG00000035694.16	Caps2	chr10	protein_coding	calcyphosphine 2
chr10	112294559	112299022	+	112294559	112297870	3pMXE	0.33	50	50	ENSMUST00000219301.2	ENSMUSG00000035681.8	Kcnc2	chr10	protein_coding	potassium voltage gated channel, Shaw-related subfamily, member 2
chr10	112294559	112301167	+	112294559	112297870	3pMXE	0.33	50	50	ENSMUST00000219301.2	ENSMUSG00000035681.8	Kcnc2	chr10	protein_coding	potassium voltage gated channel, Shaw-related subfamily, member 2
chr10	112292440;112292937	112292834;112294395	+	112292440	112294395	cassetteExon	0.5	100	100	ENSMUST00000219301.2	ENSMUSG00000035681.8	Kcnc2	chr10	protein_coding	potassium voltage gated channel, Shaw-related subfamily, member 2
chr10	112212909	112291513	+	112108309	112291513	A5SS	0.5	50	50	ENSMUST00000219301.2	ENSMUSG00000035681.8	Kcnc2	chr10	protein_coding	potassium voltage gated channel, Shaw-related subfamily, member 2
chr10	112294559	112301167	+	112294559	112299022	A3SS	0.33	50	50	ENSMUST00000092175.4	ENSMUSG00000035681.8	Kcnc2	chr10	protein_coding	potassium voltage gated channel, Shaw-related subfamily, member 2
chr10	112570908	112592331	+	112570908	112618594	A3SS	0.5	50	50	ENSMUST00000187828.7	ENSMUSG00000100314.7	1700010J16Rik	chr10	lncRNA	RIKEN cDNA 1700010J16 gene
chr10	112595514	112618594	+	112570908	112618594	A5SS	0.5	50	50	ENSMUST00000187828.7	ENSMUSG00000100314.7	1700010J16Rik	chr10	lncRNA	RIKEN cDNA 1700010J16 gene
chr10	115010024	115010672	-	115010024	115015227	A5SS	0.5	50	50	ENSMUST00000006949.9	ENSMUSG00000006764.9	Tph2	chr10	protein_coding	tryptophan hydroxylase 2
chr10	115076852	115087116	-	115076852	115087287	A5SS	0.5	50	50	ENSMUST00000020339.10	ENSMUSG00000020130.10	Tbc1d15	chr10	protein_coding	TBC1 domain family, member 15
chr10	115197864	115198292	-	115197864	115197970	5pMXE	0.33	50	50	ENSMUST00000218731.2	ENSMUSG00000069520.7	Tmem19	chr10	protein_coding	transmembrane protein 19
chr10	115183688	115184812	-	115183688	115195559	A5SS	0.5	50	50	ENSMUST00000218731.2	ENSMUSG00000069520.7	Tmem19	chr10	protein_coding	transmembrane protein 19
chr10	115195672	115197714	-	115195672	115197812	A5SS	0.5	50	50	ENSMUST00000218731.2	ENSMUSG00000069520.7	Tmem19	chr10	protein_coding	transmembrane protein 19
chr10	115197864	115197957	-	115197864	115197970	A5SS	0.33	50	50	ENSMUST00000218731.2	ENSMUSG00000069520.7	Tmem19	chr10	protein_coding	transmembrane protein 19
chr10	115197752	115198292	-	115197752	115197865	5pMXE	0.5	50	50	ENSMUST00000219890.2	ENSMUSG00000069520.7	Tmem19	chr10	protein_coding	transmembrane protein 19
chr10	115197864	115198292	-	115197864	115197957	5pMXE	0.33	50	50	ENSMUST00000092170.7	ENSMUSG00000069520.7	Tmem19	chr10	protein_coding	transmembrane protein 19
chr10	115195672;115197864	115197812;115198292	-	115195672;115197752	115197714;115198292	MXE	0.5	100	100	ENSMUST00000217884.2	ENSMUSG00000069520.7	Tmem19	chr10	protein_coding	transmembrane protein 19
chr10	115197752	115198292	-	115197864	115198292	A3SS	0.5	50	50	ENSMUST00000220336.2	ENSMUSG00000069520.7	Tmem19	chr10	protein_coding	transmembrane protein 19
chr10	115208851	115220110	-	115208851;115212452	115212257;115220110	ES	0.5	50	50	ENSMUST00000218842.2	ENSMUSG00000020137.6	Thap2	chr10	protein_coding	THAP domain containing, apoptosis associated protein 2
chr10	115302532	115307872	-	115302532;115306540	115306469;115307872	ES	0.5	50	50	ENSMUST00000020350.15	ENSMUSG00000020140.16	Lgr5	chr10	protein_coding	leucine rich repeat containing G protein coupled receptor 5
chr10	115311150	115331075	-	115311150;115314507	115314292;115331075	ES	0.5	50	50	ENSMUST00000020350.15	ENSMUSG00000020140.16	Lgr5	chr10	protein_coding	leucine rich repeat containing G protein coupled receptor 5
chr10	115653255	115653398	+	115652903	115653398	A5SS	0.33	50	50	ENSMUST00000217900.2	ENSMUSG00000034127.16	Tspan8	chr10	protein_coding	tetraspanin 8
chr10	115653291	115653398	+	115652903	115653398	A5SS	0.33	50	50	ENSMUST00000217900.2	ENSMUSG00000034127.16	Tspan8	chr10	protein_coding	tetraspanin 8
chr10	115653255	115653398	+	115653291	115653398	A5SS	0.33	50	50	ENSMUST00000080630.11	ENSMUSG00000034127.16	Tspan8	chr10	protein_coding	tetraspanin 8
chr10	115884298	115949173	+	115884298	115996364	A3SS	0.5	50	50	ENSMUST00000063470.11	ENSMUSG00000020151.17	Ptprr	chr10	protein_coding	protein tyrosine phosphatase, receptor type, R
chr10	115979942	115996364	+	115884298	115996364	A5SS	0.5	50	50	ENSMUST00000063470.11	ENSMUSG00000020151.17	Ptprr	chr10	protein_coding	protein tyrosine phosphatase, receptor type, R
chr10	116013220	116013623	+	115998515	116013623	A5SS	0.33	50	50	ENSMUST00000063470.11	ENSMUSG00000020151.17	Ptprr	chr10	protein_coding	protein tyrosine phosphatase, receptor type, R
chr10	116013505	116013623	+	115998515	116013623	A5SS	0.33	50	50	ENSMUST00000063470.11	ENSMUSG00000020151.17	Ptprr	chr10	protein_coding	protein tyrosine phosphatase, receptor type, R
chr10	116032358	116062064	+	116024373	116062064	A5SS	0.5	50	50	ENSMUST00000063470.11	ENSMUSG00000020151.17	Ptprr	chr10	protein_coding	protein tyrosine phosphatase, receptor type, R
chr10	116013505	116013623	+	116013220	116013623	A5SS	0.33	50	50	ENSMUST00000148731.8	ENSMUSG00000020151.17	Ptprr	chr10	protein_coding	protein tyrosine phosphatase, receptor type, R
chr10	116137584	116138013	+	116119782	116138013	A5SS	0.5	50	50	ENSMUST00000217925.2	ENSMUSG00000020154.11	Ptprb	chr10	protein_coding	protein tyrosine phosphatase, receptor type, B
chr10	116272236	116282232	-	116254311	116282232	A3SS	0.33	50	50	ENSMUST00000068233.11	ENSMUSG00000054934.11	Kcnmb4	chr10	protein_coding	potassium large conductance calcium-activated channel, subfamily M, beta member 4
chr10	116279817	116282232	-	116254311	116282232	A3SS	0.33	50	50	ENSMUST00000068233.11	ENSMUSG00000054934.11	Kcnmb4	chr10	protein_coding	potassium large conductance calcium-activated channel, subfamily M, beta member 4
chr10	116299939	116309091	-	116282359	116309091	A3SS	0.5	50	50	ENSMUST00000068233.11	ENSMUSG00000054934.11	Kcnmb4	chr10	protein_coding	potassium large conductance calcium-activated channel, subfamily M, beta member 4
chr10	116279817	116282232	-	116272236	116282232	A3SS	0.33	50	50	ENSMUST00000164271.2	ENSMUSG00000054934.11	Kcnmb4	chr10	protein_coding	potassium large conductance calcium-activated channel, subfamily M, beta member 4
chr10	116310426	116310671	+	116310538	116310671	A5SS	0.5	50	50	ENSMUST00000144020.8	ENSMUSG00000085837.9	Kcnmb4os2	chr10	lncRNA	potassium large conductance calcium-activated channel, subfamily M, beta member 4, opposite strand 2
chr10	116340019	116342946	-	116340019;116342316	116342134;116342946	ES	0.5	50	50	ENSMUST00000168036.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116343093	116384938	-	116343093;116353288	116353222;116384938	ES	0.2	50	50	ENSMUST00000168036.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116343093;116363854	116363732;116384938	-	116343093;116353288	116353222;116384938	MXE	0.5	100	100	ENSMUST00000168036.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116353288;116363854	116363732;116384938	-	116353288	116384938	cassetteExon	0.5	100	100	ENSMUST00000168036.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116343093;116363854	116363732;116417358	-	116343093;116385080	116353222;116417358	MXE	0.5	100	100	ENSMUST00000168036.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116353288;116363854	116363732;116417358	-	116353288;116385080	116384938;116417358	MXE	0.5	100	100	ENSMUST00000168036.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116346362	116353222	-	116343093	116353222	A3SS	0.33	50	50	ENSMUST00000168036.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116373183	116384938	-	116353288	116384938	A3SS	0.2	50	50	ENSMUST00000168036.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116373353	116384938	-	116353288	116384938	A3SS	0.2	50	50	ENSMUST00000168036.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116385010	116417358	-	116385080	116417358	A3SS	0.33	50	50	ENSMUST00000168036.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116385080	116416386	-	116385080	116417358	A5SS	0.5	50	50	ENSMUST00000168036.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116343093	116363732	-	116343093;116353288	116353222;116363732	ES	0.5	50	50	ENSMUST00000169576.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116363854	116384938	-	116363854;116373353	116373126;116384938	ES	0.2	50	50	ENSMUST00000169576.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116373183	116384938	-	116373353	116384938	A3SS	0.2	50	50	ENSMUST00000169576.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116385010	116417235	-	116385010	116417358	A5SS	0.5	50	50	ENSMUST00000169576.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116363854	116417358	-	116363854;116385080	116384938;116417358	ES	0.33	50	50	ENSMUST00000105267.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116363854;116373183	116373126;116384938	-	116363854	116384938	cassetteExon	0.5	100	100	ENSMUST00000105267.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116337222;116353288	116353222;116384938	-	116337222;116343093	116339940;116384938	MXE	0.5	100	100	ENSMUST00000105265.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116343093;116363854	116363732;116384938	-	116343093	116384938	cassetteExon	0.5	100	100	ENSMUST00000105265.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116343093;116363854	116363732;116417358	-	116343093;116385080	116384938;116417358	MXE	0.5	100	100	ENSMUST00000105265.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116373183	116384938	-	116343093	116384938	A3SS	0.2	50	50	ENSMUST00000105265.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116373353	116384938	-	116343093	116384938	A3SS	0.2	50	50	ENSMUST00000105265.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116363854	116417358	-	116363854;116385010	116384938;116417358	ES	0.33	50	50	ENSMUST00000169921.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116343093	116353222	-	116337222	116353222	A3SS	0.33	50	50	ENSMUST00000169937.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116343093	116363732	-	116353288	116363732	A3SS&ES	0.5	50	50	ENSMUST00000169937.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116343093	116384938	-	116363854	116384938	A3SS&ES	0.2	50	50	ENSMUST00000169937.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116346362	116353222	-	116337222	116353222	A3SS	0.33	50	50	ENSMUST00000169937.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116337222	116339940	-	116337222	116353222	A5SS	0.5	50	50	ENSMUST00000169937.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116343093	116384938	-	116353288	116384938	A3SS&ES	0.2	50	50	ENSMUST00000171214.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116353288;116385010	116384938;116417358	-	116353288;116363854	116363732;116417358	MXE	0.5	100	100	ENSMUST00000166166.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116363854	116373126	-	116363854	116417358	A5SS	0.33	50	50	ENSMUST00000166166.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116340019	116342946	-	116342316	116342946	3pMXE	0.5	50	50	ENSMUST00000218490.2	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116343093;116385010	116384938;116417358	-	116343093;116363854	116363732;116417358	MXE	0.5	100	100	ENSMUST00000171944.8	ENSMUSG00000020166.16	Cnot2	chr10	protein_coding	CCR4-NOT transcription complex, subunit 2
chr10	116346062	116418891	+	116346062	116358324	3pMXE	0.5	50	50	ENSMUST00000219210.2	ENSMUSG00000052291.9	5330438D12Rik	chr10	lncRNA	RIKEN cDNA 5330438D12 gene
chr10	116417627	116418891	+	116346062	116418891	A5SS	0.5	50	50	ENSMUST00000220305.2	ENSMUSG00000052291.9	5330438D12Rik	chr10	lncRNA	RIKEN cDNA 5330438D12 gene
chr10	116775386	116786641	-	116775386	116786165	5pMXE	0.5	50	50	ENSMUST00000020375.7	ENSMUSG00000064181.7	Rab3ip	chr10	protein_coding	RAB3A interacting protein
chr10	116755556;116764189	116764094;116773302	-	116755556	116773302	cassetteExon	0.5	100	100	ENSMUST00000020375.7	ENSMUSG00000064181.7	Rab3ip	chr10	protein_coding	RAB3A interacting protein
chr10	116775381	116786165	-	116775386	116786165	A3SS	0.5	50	50	ENSMUST00000020375.7	ENSMUSG00000064181.7	Rab3ip	chr10	protein_coding	RAB3A interacting protein
chr10	116791562	116797935	+	116791562	116794790	3pMXE	0.5	50	50	ENSMUST00000220066.2	ENSMUSG00000112627.2	4933412E12Rik	chr10	lncRNA	RIKEN cDNA 4933412E12 gene
chr10	116786597	116791433	+	116785956	116791433	A5SS	0.33	50	50	ENSMUST00000220066.2	ENSMUSG00000112627.2	4933412E12Rik	chr10	lncRNA	RIKEN cDNA 4933412E12 gene
chr10	116790630	116791433	+	116785956	116791433	A5SS	0.33	50	50	ENSMUST00000220066.2	ENSMUSG00000112627.2	4933412E12Rik	chr10	lncRNA	RIKEN cDNA 4933412E12 gene
chr10	116786597;116790630	116790418;116791433	+	116786597	116791433	cassetteExon	0.5	100	100	ENSMUST00000220251.2	ENSMUSG00000112627.2	4933412E12Rik	chr10	lncRNA	RIKEN cDNA 4933412E12 gene
chr10	116800891	116802443	+	116800781	116802443	A5SS	0.25	50	50	ENSMUST00000176050.8	ENSMUSG00000031294.10	D630029K05Rik	chr10	lncRNA	RIKEN cDNA D630029K05 gene
chr10	116801963	116802443	+	116800781	116802443	A5SS	0.25	50	50	ENSMUST00000176050.8	ENSMUSG00000031294.10	D630029K05Rik	chr10	lncRNA	RIKEN cDNA D630029K05 gene
chr10	116802315	116802443	+	116800781	116802443	A5SS	0.25	50	50	ENSMUST00000176050.8	ENSMUSG00000031294.10	D630029K05Rik	chr10	lncRNA	RIKEN cDNA D630029K05 gene
chr10	116801963	116802443	+	116800891	116802443	A5SS	0.25	50	50	ENSMUST00000176455.8	ENSMUSG00000031294.10	D630029K05Rik	chr10	lncRNA	RIKEN cDNA D630029K05 gene
chr10	116802315	116802443	+	116800891	116802443	A5SS	0.25	50	50	ENSMUST00000176455.8	ENSMUSG00000031294.10	D630029K05Rik	chr10	lncRNA	RIKEN cDNA D630029K05 gene
chr10	116802315	116802443	+	116801963	116802443	A5SS	0.25	50	50	ENSMUST00000176045.8	ENSMUSG00000031294.10	D630029K05Rik	chr10	lncRNA	RIKEN cDNA D630029K05 gene
chr10	116887212	116888921	-	116887181	116888921	A3SS	0.5	50	50	ENSMUST00000047672.9	ENSMUSG00000034024.9	Cct2	chr10	protein_coding	chaperonin containing Tcp1, subunit 2 (beta)
chr10	116891286	116891945	-	116891140	116891945	A3SS	0.5	50	50	ENSMUST00000047672.9	ENSMUSG00000034024.9	Cct2	chr10	protein_coding	chaperonin containing Tcp1, subunit 2 (beta)
chr10	116899044	116899611	-	116898955	116899611	A3SS	0.5	50	50	ENSMUST00000047672.9	ENSMUSG00000034024.9	Cct2	chr10	protein_coding	chaperonin containing Tcp1, subunit 2 (beta)
chr10	116898955	116899065	-	116898955	116899611	A5SS	0.5	50	50	ENSMUST00000047672.9	ENSMUSG00000034024.9	Cct2	chr10	protein_coding	chaperonin containing Tcp1, subunit 2 (beta)
chr10	116920504	116920937	-	116917018	116920937	A3SS	0.5	50	50	ENSMUST00000020381.5	ENSMUSG00000020170.5	Frs2	chr10	protein_coding	fibroblast growth factor receptor substrate 2
chr10	116938103	116966690	-	116938103	116984297	A5SS	0.5	50	50	ENSMUST00000020381.5	ENSMUSG00000020170.5	Frs2	chr10	protein_coding	fibroblast growth factor receptor substrate 2
chr10	117016598	117016769	+	117013342	117016769	A5SS	0.5	50	50	ENSMUST00000217687.2	ENSMUSG00000112753.2	4930423D24Rik	chr10	lncRNA	RIKEN cDNA 4930423D24 gene
chr10	117056332	117056437	-	117056360	117056437	A3SS	0.5	50	50	ENSMUST00000218887.2	ENSMUSG00000020171.9	Yeats4	chr10	protein_coding	YEATS domain containing 4
chr10	117203893	117213483	-	117203893	117212744	5pMXE	0.5	50	50	ENSMUST00000069168.13	ENSMUSG00000055531.13	Cpsf6	chr10	protein_coding	cleavage and polyadenylation specific factor 6
chr10	117185372;117191757	117191687;117191840	-	117185372	117191840	cassetteExon	0.5	100	100	ENSMUST00000069168.13	ENSMUSG00000055531.13	Cpsf6	chr10	protein_coding	cleavage and polyadenylation specific factor 6
chr10	117197265;117197789	117197679;117197919	-	117197265	117197919	cassetteExon	0.5	100	100	ENSMUST00000069168.13	ENSMUSG00000055531.13	Cpsf6	chr10	protein_coding	cleavage and polyadenylation specific factor 6
chr10	117185406	117191840	-	117185372	117191840	A3SS	0.33	50	50	ENSMUST00000069168.13	ENSMUSG00000055531.13	Cpsf6	chr10	protein_coding	cleavage and polyadenylation specific factor 6
chr10	117192032	117194898	-	117192029	117194898	A3SS	0.5	50	50	ENSMUST00000069168.13	ENSMUSG00000055531.13	Cpsf6	chr10	protein_coding	cleavage and polyadenylation specific factor 6
chr10	117191757	117191840	-	117185406	117191840	A3SS	0.33	50	50	ENSMUST00000176686.8	ENSMUSG00000055531.13	Cpsf6	chr10	protein_coding	cleavage and polyadenylation specific factor 6
chr10	117185372	117191840	-	117191757	117191840	3pMXE	0.33	50	50	ENSMUST00000175888.2	ENSMUSG00000055531.13	Cpsf6	chr10	protein_coding	cleavage and polyadenylation specific factor 6
chr10	117395169	117395266	+	117395169	117395246	A3SS	0.5	50	50	ENSMUST00000218563.2	ENSMUSG00000112399.2	Gm32235	chr10	lncRNA	predicted gene, 32235
chr10	117395385	117395564	+	117395338	117395564	A5SS	0.5	50	50	ENSMUST00000218563.2	ENSMUSG00000112399.2	Gm32235	chr10	lncRNA	predicted gene, 32235
chr10	117451197	117451676	+	117451300	117451676	A5SS	0.5	50	50	ENSMUST00000220053.2	ENSMUSG00000112476.2	Gm32365	chr10	lncRNA	predicted gene, 32365
chr10	117465788	117495673	+	117465788	117470776	3pMXE	0.33	50	50	ENSMUST00000138020.8	ENSMUSG00000020183.12	Cpm	chr10	protein_coding	carboxypeptidase M
chr10	117465788	117495677	+	117465788	117470776	3pMXE	0.33	50	50	ENSMUST00000138020.8	ENSMUSG00000020183.12	Cpm	chr10	protein_coding	carboxypeptidase M
chr10	117465432	117465626	+	117465536	117465626	A5SS	0.5	50	50	ENSMUST00000138020.8	ENSMUSG00000020183.12	Cpm	chr10	protein_coding	carboxypeptidase M
chr10	117465788	117495673	+	117465788	117495677	A3SS	0.33	50	50	ENSMUST00000123374.8	ENSMUSG00000020183.12	Cpm	chr10	protein_coding	carboxypeptidase M
chr10	117530973	117532286	-	117530973;117531954	117531858;117532286	ES	0.5	50	50	ENSMUST00000020408.16	ENSMUSG00000020184.16	Mdm2	chr10	protein_coding	transformed mouse 3T3 cell double minute 2
chr10	117541134	117545851	-	117541134;117545689	117545605;117545851	ES	0.5	50	50	ENSMUST00000020408.16	ENSMUSG00000020184.16	Mdm2	chr10	protein_coding	transformed mouse 3T3 cell double minute 2
chr10	117541134	117545559	-	117541134	117545605	A5SS	0.33	50	50	ENSMUST00000020408.16	ENSMUSG00000020184.16	Mdm2	chr10	protein_coding	transformed mouse 3T3 cell double minute 2
chr10	117541134	117545851	-	117541134;117545689	117545559;117545851	ES	0.5	50	50	ENSMUST00000105263.9	ENSMUSG00000020184.16	Mdm2	chr10	protein_coding	transformed mouse 3T3 cell double minute 2
chr10	117530973	117532286	-	117531954	117532286	3pMXE	0.5	50	50	ENSMUST00000126022.8	ENSMUSG00000020184.16	Mdm2	chr10	protein_coding	transformed mouse 3T3 cell double minute 2
chr10	117617965	117623698	-	117617965;117621044	117620900;117623698	ES	0.5	50	50	ENSMUST00000218576.2	ENSMUSG00000052798.14	Nup107	chr10	protein_coding	nucleoporin 107
chr10	117610474	117612116	-	117610493	117612116	A3SS	0.5	50	50	ENSMUST00000218576.2	ENSMUSG00000052798.14	Nup107	chr10	protein_coding	nucleoporin 107
chr10	117625959	117626372	-	117625965	117626372	A3SS	0.5	50	50	ENSMUST00000218576.2	ENSMUSG00000052798.14	Nup107	chr10	protein_coding	nucleoporin 107
chr10	117625960	117628509	-	117626463	117628509	A3SS&ES	0.5	50	50	ENSMUST00000218576.2	ENSMUSG00000052798.14	Nup107	chr10	protein_coding	nucleoporin 107
chr10	117651685;117652251	117652092;117653249	-	117651685	117653249	cassetteExon	0.5	100	100	ENSMUST00000064667.9	ENSMUSG00000052681.9	Rap1b	chr10	protein_coding	RAS related protein 1b
chr10	117977867;117978869	117978755;117982500	+	117977867	117982500	cassetteExon	0.5	100	100	ENSMUST00000219827.2	ENSMUSG00000020212.15	Mdm1	chr10	protein_coding	transformed mouse 3T3 cell double minute 1
chr10	117982876	117986694	+	117982876;117984020	117983886;117986694	ES	0.5	50	50	ENSMUST00000020437.13	ENSMUSG00000020212.15	Mdm1	chr10	protein_coding	transformed mouse 3T3 cell double minute 1
chr10	118000352	118003956	+	118000352;118002589	118002530;118003956	ES	0.5	50	50	ENSMUST00000020437.13	ENSMUSG00000020212.15	Mdm1	chr10	protein_coding	transformed mouse 3T3 cell double minute 1
chr10	117988179;117992768	117992739;117993100	+	117988179	117993100	cassetteExon	0.5	100	100	ENSMUST00000020437.13	ENSMUSG00000020212.15	Mdm1	chr10	protein_coding	transformed mouse 3T3 cell double minute 1
chr10	117984020	117986727	+	117984020	117986694	A3SS	0.5	50	50	ENSMUST00000020437.13	ENSMUSG00000020212.15	Mdm1	chr10	protein_coding	transformed mouse 3T3 cell double minute 1
chr10	117982876	117986694	+	117982876	117983886	3pMXE	0.5	50	50	ENSMUST00000218011.2	ENSMUSG00000020212.15	Mdm1	chr10	protein_coding	transformed mouse 3T3 cell double minute 1
chr10	118347485	118350489	-	118338269	118350489	A3SS	0.5	50	50	ENSMUST00000239416.2	ENSMUSG00000112230.3	Ifngas1	chr10	lncRNA	Ifng antisense RNA 1
chr10	118361139	118377668	-	118361139	118392357	A5SS	0.5	50	50	ENSMUST00000220034.2	ENSMUSG00000112230.3	Ifngas1	chr10	lncRNA	Ifng antisense RNA 1
chr10	118697058;118701003	118700936;118704055	-	118697058	118704055	cassetteExon	0.5	100	100	ENSMUST00000004281.10	ENSMUSG00000028630.10	Dyrk2	chr10	protein_coding	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
chr10	118697058	118700936	-	118697058	118706062	A5SS	0.33	50	50	ENSMUST00000218477.2	ENSMUSG00000028630.10	Dyrk2	chr10	protein_coding	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
chr10	118697058	118704055	-	118697058	118706062	A5SS	0.33	50	50	ENSMUST00000218477.2	ENSMUSG00000028630.10	Dyrk2	chr10	protein_coding	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
chr10	119063451	119075057	-	119063451	119075546	A5SS	0.5	50	50	ENSMUST00000020315.13	ENSMUSG00000020114.13	Cand1	chr10	protein_coding	cullin associated and neddylation disassociated 1
chr10	119275394	119290586	-	119266422	119290586	A3SS	0.33	50	50	ENSMUST00000154566.2	ENSMUSG00000085454.2	Grip1os3	chr10	lncRNA	glutamate receptor interacting protein 1, opposite strand 3
chr10	119275417	119290586	-	119266422	119290586	A3SS	0.33	50	50	ENSMUST00000154566.2	ENSMUSG00000085454.2	Grip1os3	chr10	lncRNA	glutamate receptor interacting protein 1, opposite strand 3
chr10	119275417	119290586	-	119275394	119290586	A3SS	0.33	50	50	ENSMUST00000127706.2	ENSMUSG00000085454.2	Grip1os3	chr10	lncRNA	glutamate receptor interacting protein 1, opposite strand 3
chr10	119814512	119835657	+	119814512;119822389	119822237;119835657	ES	0.33	50	50	ENSMUST00000077871.14	ENSMUSG00000034813.19	Grip1	chr10	protein_coding	glutamate receptor interacting protein 1
chr10	119874335	119885256	+	119874335;119874698	119874504;119885256	ES	0.5	50	50	ENSMUST00000077871.14	ENSMUSG00000034813.19	Grip1	chr10	protein_coding	glutamate receptor interacting protein 1
chr10	119290327;119733700	119733620;119765806	+	119290327	119765806	cassetteExon	0.5	100	100	ENSMUST00000077871.14	ENSMUSG00000034813.19	Grip1	chr10	protein_coding	glutamate receptor interacting protein 1
chr10	119814512;119821534	119821379;119822237	+	119814512	119822237	cassetteExon	0.5	100	100	ENSMUST00000077871.14	ENSMUSG00000034813.19	Grip1	chr10	protein_coding	glutamate receptor interacting protein 1
chr10	119886021;119886181	119886137;119890738	+	119886021	119890738	cassetteExon	0.5	100	100	ENSMUST00000077871.14	ENSMUSG00000034813.19	Grip1	chr10	protein_coding	glutamate receptor interacting protein 1
chr10	119655539	119765806	+	119290327	119765806	A5SS	0.25	50	50	ENSMUST00000077871.14	ENSMUSG00000034813.19	Grip1	chr10	protein_coding	glutamate receptor interacting protein 1
chr10	119745936	119765806	+	119290327	119765806	A5SS	0.25	50	50	ENSMUST00000077871.14	ENSMUSG00000034813.19	Grip1	chr10	protein_coding	glutamate receptor interacting protein 1
chr10	119829147	119835657	+	119822389	119835657	A5SS	0.33	50	50	ENSMUST00000077871.14	ENSMUSG00000034813.19	Grip1	chr10	protein_coding	glutamate receptor interacting protein 1
chr10	119733700	119765808	+	119733700	119765806	A3SS	0.5	50	50	ENSMUST00000041962.16	ENSMUSG00000034813.19	Grip1	chr10	protein_coding	glutamate receptor interacting protein 1
chr10	119655539	119733620	+	119290327	119733620	A5SS	0.33	50	50	ENSMUST00000041962.16	ENSMUSG00000034813.19	Grip1	chr10	protein_coding	glutamate receptor interacting protein 1
chr10	119655539	119765806	+	119733700	119765806	A5SS&ES	0.25	50	50	ENSMUST00000041962.16	ENSMUSG00000034813.19	Grip1	chr10	protein_coding	glutamate receptor interacting protein 1
chr10	119686686	119733620	+	119290327	119733620	A5SS	0.33	50	50	ENSMUST00000041962.16	ENSMUSG00000034813.19	Grip1	chr10	protein_coding	glutamate receptor interacting protein 1
chr10	119745936	119765806	+	119733700	119765806	A5SS	0.25	50	50	ENSMUST00000041962.16	ENSMUSG00000034813.19	Grip1	chr10	protein_coding	glutamate receptor interacting protein 1
chr10	119913292	119922857	+	119911381	119922857	A5SS	0.5	50	50	ENSMUST00000147356.9	ENSMUSG00000034813.19	Grip1	chr10	protein_coding	glutamate receptor interacting protein 1
chr10	119655539	119765806	+	119655539;119733700	119733620;119765806	ES	0.33	50	50	ENSMUST00000105262.9	ENSMUSG00000034813.19	Grip1	chr10	protein_coding	glutamate receptor interacting protein 1
chr10	119686686	119733620	+	119655539	119733620	A5SS	0.33	50	50	ENSMUST00000105262.9	ENSMUSG00000034813.19	Grip1	chr10	protein_coding	glutamate receptor interacting protein 1
chr10	119745936	119765806	+	119655539	119765806	A5SS	0.25	50	50	ENSMUST00000147598.8	ENSMUSG00000034813.19	Grip1	chr10	protein_coding	glutamate receptor interacting protein 1
chr10	119814512	119835657	+	119814512;119822389	119821379;119835657	ES	0.33	50	50	ENSMUST00000139352.8	ENSMUSG00000034813.19	Grip1	chr10	protein_coding	glutamate receptor interacting protein 1
chr10	119814512	119822237	+	119814512	119821379	A3SS	0.33	50	50	ENSMUST00000139352.8	ENSMUSG00000034813.19	Grip1	chr10	protein_coding	glutamate receptor interacting protein 1
chr10	119814512	119821379	+	119814512	119835657	A3SS	0.33	50	50	ENSMUST00000127787.2	ENSMUSG00000034813.19	Grip1	chr10	protein_coding	glutamate receptor interacting protein 1
chr10	119829147	119835657	+	119814512	119835657	A5SS	0.33	50	50	ENSMUST00000127787.2	ENSMUSG00000034813.19	Grip1	chr10	protein_coding	glutamate receptor interacting protein 1
chr10	119685621;119686542	119686352;119688178	-	119685621;119687753	119686961;119688178	MXE	0.5	100	100	ENSMUST00000126965.2	ENSMUSG00000085418.2	Grip1os1	chr10	lncRNA	glutamate receptor interacting protein 1, opposite strand 1
chr10	119687753	119688178	-	119686542	119688178	A3SS	0.5	50	50	ENSMUST00000135940.2	ENSMUSG00000085418.2	Grip1os1	chr10	lncRNA	glutamate receptor interacting protein 1, opposite strand 1
chr10	119685621	119686961	-	119685621	119686352	A5SS&ES	0.5	50	50	ENSMUST00000135940.2	ENSMUSG00000085418.2	Grip1os1	chr10	lncRNA	glutamate receptor interacting protein 1, opposite strand 1
chr10	119937444	119941064	-	119937444;119938849	119938675;119941064	ES	0.5	50	50	ENSMUST00000020449.12	ENSMUSG00000020228.12	Helb	chr10	protein_coding	helicase (DNA) B
chr10	120018613	120037914	-	120018613	120037232	5pMXE	0.5	50	50	ENSMUST00000020448.11	ENSMUSG00000020227.11	Irak3	chr10	protein_coding	interleukin-1 receptor-associated kinase 3
chr10	119996386	120000998	-	119982534	120000998	A3SS	0.5	50	50	ENSMUST00000020448.11	ENSMUSG00000020227.11	Irak3	chr10	protein_coding	interleukin-1 receptor-associated kinase 3
chr10	119982534	120000946	-	119982534	120000998	A5SS	0.5	50	50	ENSMUST00000020448.11	ENSMUSG00000020227.11	Irak3	chr10	protein_coding	interleukin-1 receptor-associated kinase 3
chr10	120038612	120038853	+	120038100	120038853	A5SS	0.5	50	50	ENSMUST00000156247.2	ENSMUSG00000020225.11	Tmbim4	chr10	protein_coding	transmembrane BAX inhibitor motif containing 4
chr10	120051554	120056656	+	120051554	120053409	3pMXE	0.5	50	50	ENSMUST00000156877.8	ENSMUSG00000020225.11	Tmbim4	chr10	protein_coding	transmembrane BAX inhibitor motif containing 4
chr10	120037754	120038007	+	120037754	120051446	A3SS	0.5	50	50	ENSMUST00000156877.8	ENSMUSG00000020225.11	Tmbim4	chr10	protein_coding	transmembrane BAX inhibitor motif containing 4
chr10	120044847	120051446	+	120037754	120051446	A5SS	0.5	50	50	ENSMUST00000156877.8	ENSMUSG00000020225.11	Tmbim4	chr10	protein_coding	transmembrane BAX inhibitor motif containing 4
chr10	120051554	120056656	+	120051554;120053514	120053409;120056656	ES	0.5	50	50	ENSMUST00000020446.11	ENSMUSG00000020225.11	Tmbim4	chr10	protein_coding	transmembrane BAX inhibitor motif containing 4
chr10	120064108;120066467	120066315;120067108	+	120064108	120067108	cassetteExon	0.5	100	100	ENSMUST00000020444.16	ENSMUSG00000020224.16	Llph	chr10	protein_coding	LLP homolog, long-term synaptic facilitation (Aplysia)
chr10	120063454	120063879	+	120063028	120063879	A5SS	0.5	50	50	ENSMUST00000020444.16	ENSMUSG00000020224.16	Llph	chr10	protein_coding	LLP homolog, long-term synaptic facilitation (Aplysia)
chr10	120200201;120206630	120206531;120210573	-	120200201	120210573	cassetteExon	0.5	100	100	ENSMUST00000072777.14	ENSMUSG00000056758.15	Hmga2	chr10	protein_coding	high mobility group AT-hook 2
chr10	120205929;120207209	120207162;120217970	+	120205929	120217970	cassetteExon	0.5	100	100	ENSMUST00000041178.12	ENSMUSG00000034764.16	1700006J14Rik	chr10	lncRNA	RIKEN cDNA 1700006J14 gene
chr10	120205929	120216375	+	120205929	120217970	A3SS	0.33	50	50	ENSMUST00000041178.12	ENSMUSG00000034764.16	1700006J14Rik	chr10	lncRNA	RIKEN cDNA 1700006J14 gene
chr10	120205929	120216375	+	120205929	120207162	A3SS&ES	0.33	50	50	ENSMUST00000160091.8	ENSMUSG00000034764.16	1700006J14Rik	chr10	lncRNA	RIKEN cDNA 1700006J14 gene
chr10	120607036	120613540	+	120607036	120610220	3pMXE	0.5	50	50	ENSMUST00000219219.2	ENSMUSG00000044544.5	4921513I03Rik	chr10	lncRNA	RIKEN cDNA 4921513I03 gene
chr10	120627404;120657405	120657289;120661013	-	120627404	120661013	cassetteExon	0.5	100	100	ENSMUST00000092143.12	ENSMUSG00000051236.14	Msrb3	chr10	protein_coding	methionine sulfoxide reductase B3
chr10	120685958	120686287	-	120685958	120687889	A5SS	0.5	50	50	ENSMUST00000092143.12	ENSMUSG00000051236.14	Msrb3	chr10	protein_coding	methionine sulfoxide reductase B3
chr10	120687997	120706940	-	120627404	120706940	A3SS	0.5	50	50	ENSMUST00000130950.2	ENSMUSG00000051236.14	Msrb3	chr10	protein_coding	methionine sulfoxide reductase B3
chr10	120627404	120657289	-	120627404	120706940	A5SS	0.33	50	50	ENSMUST00000130950.2	ENSMUSG00000051236.14	Msrb3	chr10	protein_coding	methionine sulfoxide reductase B3
chr10	120627404	120661013	-	120627404	120706940	A5SS	0.33	50	50	ENSMUST00000130950.2	ENSMUSG00000051236.14	Msrb3	chr10	protein_coding	methionine sulfoxide reductase B3
chr10	120769614;120773046	120772981;120783109	-	120769614	120783109	cassetteExon	0.5	100	100	ENSMUST00000119944.8	ENSMUSG00000048661.15	Lemd3	chr10	protein_coding	LEM domain containing 3
chr10	120931957	120932546	+	120931999	120932546	A5SS	0.5	50	50	ENSMUST00000020439.11	ENSMUSG00000020218.12	Wif1	chr10	protein_coding	Wnt inhibitory factor 1
chr10	121142788	121183010	-	121142788	121146549	5pMXE	0.5	50	50	ENSMUST00000064107.7	ENSMUSG00000052302.7	Tbc1d30	chr10	protein_coding	TBC1 domain family, member 30
chr10	121124886	121130494	-	121124890	121130494	A3SS	0.5	50	50	ENSMUST00000064107.7	ENSMUSG00000052302.7	Tbc1d30	chr10	protein_coding	TBC1 domain family, member 30
chr10	121178468	121183010	-	121142788	121183010	A3SS	0.5	50	50	ENSMUST00000219179.2	ENSMUSG00000052302.7	Tbc1d30	chr10	protein_coding	TBC1 domain family, member 30
chr10	121201263;121206323	121206202;121207049	+	121201263	121207049	cassetteExon	0.5	100	100	ENSMUST00000040344.7	ENSMUSG00000034707.8	Gns	chr10	protein_coding	glucosamine (N-acetyl)-6-sulfatase
chr10	121207108	121210295	+	121207108	121210263	A3SS	0.5	50	50	ENSMUST00000040344.7	ENSMUSG00000034707.8	Gns	chr10	protein_coding	glucosamine (N-acetyl)-6-sulfatase
chr10	121212639	121214000	+	121212639	121213927	A3SS	0.5	50	50	ENSMUST00000040344.7	ENSMUSG00000034707.8	Gns	chr10	protein_coding	glucosamine (N-acetyl)-6-sulfatase
chr10	121216105	121216946	+	121216105	121217078	A3SS	0.5	50	50	ENSMUST00000040344.7	ENSMUSG00000034707.8	Gns	chr10	protein_coding	glucosamine (N-acetyl)-6-sulfatase
chr10	121213145	121213927	+	121212639	121213927	A5SS	0.5	50	50	ENSMUST00000040344.7	ENSMUSG00000034707.8	Gns	chr10	protein_coding	glucosamine (N-acetyl)-6-sulfatase
chr10	121253097	121297815	-	121253097	121311908	A5SS	0.5	50	50	ENSMUST00000026902.9	ENSMUSG00000025795.9	Rassf3	chr10	protein_coding	Ras association (RalGDS/AF-6) domain family member 3
chr10	121346530	121358702	+	121346530	121361539	A3SS	0.5	50	50	ENSMUST00000220364.2	ENSMUSG00000112527.2	Gm35696	chr10	lncRNA	predicted gene, 35696
chr10	121414625	121422600	-	121414625;121420246	121420101;121422600	ES	0.5	50	50	ENSMUST00000020316.4	ENSMUSG00000020115.4	Tbk1	chr10	protein_coding	TANK-binding kinase 1
chr10	121388197	121388313	-	121388201	121388313	A3SS	0.5	50	50	ENSMUST00000020316.4	ENSMUSG00000020115.4	Tbk1	chr10	protein_coding	TANK-binding kinase 1
chr10	121398309	121399831	-	121397678	121399831	A3SS	0.5	50	50	ENSMUST00000020316.4	ENSMUSG00000020115.4	Tbk1	chr10	protein_coding	TANK-binding kinase 1
chr10	121407929	121412183	-	121407929	121412179	A5SS	0.5	50	50	ENSMUST00000020316.4	ENSMUSG00000020115.4	Tbk1	chr10	protein_coding	TANK-binding kinase 1
chr10	121429628	121435492	-	121429628;121432160	121432089;121435492	ES	0.5	50	50	ENSMUST00000039810.8	ENSMUSG00000034667.9	Xpot	chr10	protein_coding	exportin, tRNA (nuclear export receptor for tRNAs)
chr10	121490813;121492265	121492090;121496979	+	121490813	121496979	cassetteExon	0.5	100	100	ENSMUST00000142501.8	ENSMUSG00000047642.16	D930020B18Rik	chr10	protein_coding	RIKEN cDNA D930020B18 gene
chr10	121477974	121490654	+	121477510	121490654	A5SS	0.5	50	50	ENSMUST00000142501.8	ENSMUSG00000047642.16	D930020B18Rik	chr10	protein_coding	RIKEN cDNA D930020B18 gene
chr10	121497051	121503312	+	121497051	121507614	A3SS	0.5	50	50	ENSMUST00000132744.2	ENSMUSG00000047642.16	D930020B18Rik	chr10	protein_coding	RIKEN cDNA D930020B18 gene
chr10	121505135	121507614	+	121497051	121507614	A5SS	0.5	50	50	ENSMUST00000132744.2	ENSMUSG00000047642.16	D930020B18Rik	chr10	protein_coding	RIKEN cDNA D930020B18 gene
chr10	121576115	121581403	+	121576115	121581236	A3SS	0.5	50	50	ENSMUST00000065600.8	ENSMUSG00000053684.9	BC048403	chr10	protein_coding	cDNA sequence BC048403
chr10	121640945;121642936	121642793;121643766	-	121640945	121643766	cassetteExon	0.5	100	100	ENSMUST00000020322.12	ENSMUSG00000020121.16	Srgap1	chr10	protein_coding	SLIT-ROBO Rho GTPase activating protein 1
chr10	121661599;121665234	121665132;121667790	-	121661599;121664667	121664634;121667790	MXE	0.5	100	100	ENSMUST00000020322.12	ENSMUSG00000020121.16	Srgap1	chr10	protein_coding	SLIT-ROBO Rho GTPase activating protein 1
chr10	121640945	121643766	-	121640945	121642793	5pMXE	0.5	50	50	ENSMUST00000161996.2	ENSMUSG00000020121.16	Srgap1	chr10	protein_coding	SLIT-ROBO Rho GTPase activating protein 1
chr10	121640945	121643766	-	121642936	121643766	3pMXE	0.5	50	50	ENSMUST00000161156.2	ENSMUSG00000020121.16	Srgap1	chr10	protein_coding	SLIT-ROBO Rho GTPase activating protein 1
chr10	121931999;121932366	121932253;121932805	-	121931999	121932805	cassetteExon	0.5	100	100	ENSMUST00000140299.3	ENSMUSG00000034620.18	Rxylt1	chr10	protein_coding	ribitol xylosyltransferase 1
chr10	121932132	121932805	-	121931999	121932805	A3SS	0.33	50	50	ENSMUST00000140299.3	ENSMUSG00000034620.18	Rxylt1	chr10	protein_coding	ribitol xylosyltransferase 1
chr10	121932132	121932805	-	121932366	121932805	A3SS&ES	0.33	50	50	ENSMUST00000038772.13	ENSMUSG00000034620.18	Rxylt1	chr10	protein_coding	ribitol xylosyltransferase 1
chr10	122647464	122651551	+	122647464	122692967	A3SS	0.5	50	50	ENSMUST00000162853.8	ENSMUSG00000034613.13	Ppm1h	chr10	protein_coding	protein phosphatase 1H (PP2C domain containing)
chr10	122593327	122618088	+	122515335	122618088	A5SS	0.5	50	50	ENSMUST00000162853.8	ENSMUSG00000034613.13	Ppm1h	chr10	protein_coding	protein phosphatase 1H (PP2C domain containing)
chr10	122714532	122722113	+	122714532	122739997	A3SS	0.5	50	50	ENSMUST00000161487.8	ENSMUSG00000034613.13	Ppm1h	chr10	protein_coding	protein phosphatase 1H (PP2C domain containing)
chr10	122731534	122739997	+	122714532	122739997	A5SS	0.5	50	50	ENSMUST00000161487.8	ENSMUSG00000034613.13	Ppm1h	chr10	protein_coding	protein phosphatase 1H (PP2C domain containing)
chr10	122845536	122846399	-	122845536;122845835	122845818;122846399	ES	0.5	50	50	ENSMUST00000073792.11	ENSMUSG00000034602.16	Mon2	chr10	protein_coding	MON2 homolog, regulator of endosome to Golgi trafficking
chr10	122858849	122859815	-	122858849;122858993	122858991;122859815	ES	0.5	50	50	ENSMUST00000073792.11	ENSMUSG00000034602.16	Mon2	chr10	protein_coding	MON2 homolog, regulator of endosome to Golgi trafficking
chr10	122866548	122866945	-	122866199	122866945	A3SS	0.5	50	50	ENSMUST00000073792.11	ENSMUSG00000034602.16	Mon2	chr10	protein_coding	MON2 homolog, regulator of endosome to Golgi trafficking
chr10	122867029	122868428	-	122867026	122868428	A3SS	0.5	50	50	ENSMUST00000073792.11	ENSMUSG00000034602.16	Mon2	chr10	protein_coding	MON2 homolog, regulator of endosome to Golgi trafficking
chr10	122858849	122859815	-	122858849	122858991	5pMXE	0.5	50	50	ENSMUST00000219515.2	ENSMUSG00000034602.16	Mon2	chr10	protein_coding	MON2 homolog, regulator of endosome to Golgi trafficking
chr10	122982843	122999498	-	122982843;122989032	122988946;122999498	ES	0.5	50	50	ENSMUST00000220377.2	ENSMUSG00000020124.11	Usp15	chr10	protein_coding	ubiquitin specific peptidase 15
chr10	122989032	123004132	-	122989032;122999559	122999498;123004132	ES	0.5	50	50	ENSMUST00000220377.2	ENSMUSG00000020124.11	Usp15	chr10	protein_coding	ubiquitin specific peptidase 15
chr10	122982843	122983152	-	122982843	122988946	A5SS	0.33	50	50	ENSMUST00000220377.2	ENSMUSG00000020124.11	Usp15	chr10	protein_coding	ubiquitin specific peptidase 15
chr10	122982843;122989032	122988946;123004132	-	122982843;122999559	122999498;123004132	MXE	0.5	100	100	ENSMUST00000020334.9	ENSMUSG00000020124.11	Usp15	chr10	protein_coding	ubiquitin specific peptidase 15
chr10	122982843	122983152	-	122982843	122999498	A5SS	0.33	50	50	ENSMUST00000020334.9	ENSMUSG00000020124.11	Usp15	chr10	protein_coding	ubiquitin specific peptidase 15
chr10	122982843	122999498	-	122989032	122999498	3pMXE	0.5	50	50	ENSMUST00000220284.2	ENSMUSG00000020124.11	Usp15	chr10	protein_coding	ubiquitin specific peptidase 15
chr10	122989032	123004132	-	122999559	123004132	3pMXE	0.5	50	50	ENSMUST00000219010.2	ENSMUSG00000020124.11	Usp15	chr10	protein_coding	ubiquitin specific peptidase 15
chr10	123011878	123017578	-	123004277	123017578	A3SS	0.5	50	50	ENSMUST00000219619.2	ENSMUSG00000020124.11	Usp15	chr10	protein_coding	ubiquitin specific peptidase 15
chr10	123004277	123007005	-	123004277	123017578	A5SS	0.5	50	50	ENSMUST00000219619.2	ENSMUSG00000020124.11	Usp15	chr10	protein_coding	ubiquitin specific peptidase 15
chr10	123541729	123574809	+	123541729;123566232	123565987;123574809	ES	0.5	50	50	ENSMUST00000218926.2	ENSMUSG00000044071.10	Tafa2	chr10	protein_coding	TAFA chemokine like family member 2
chr10	123101446;123266828	123266617;123429399	+	123101446	123429399	cassetteExon	0.5	100	100	ENSMUST00000218926.2	ENSMUSG00000044071.10	Tafa2	chr10	protein_coding	TAFA chemokine like family member 2
chr10	125137950	125175008	-	125137950	125164204	5pMXE	0.33	50	50	ENSMUST00000211781.2	ENSMUSG00000020102.16	Slc16a7	chr10	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 7
chr10	125130713;125134571	125134491;125137826	-	125130713	125137826	cassetteExon	0.5	100	100	ENSMUST00000211781.2	ENSMUSG00000020102.16	Slc16a7	chr10	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 7
chr10	125137950	125144583	-	125137950	125164204	A5SS	0.33	50	50	ENSMUST00000211781.2	ENSMUSG00000020102.16	Slc16a7	chr10	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 7
chr10	125177719;125213447	125213344;125225156	-	125177719	125225156	cassetteExon	0.5	100	100	ENSMUST00000210780.2	ENSMUSG00000020102.16	Slc16a7	chr10	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 7
chr10	125137950	125144583	-	125137950	125175008	A5SS	0.33	50	50	ENSMUST00000210780.2	ENSMUSG00000020102.16	Slc16a7	chr10	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 7
chr10	125177719	125177823	-	125177719	125225156	A5SS	0.33	50	50	ENSMUST00000210780.2	ENSMUSG00000020102.16	Slc16a7	chr10	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 7
chr10	125177719	125213344	-	125177719	125177823	5pMXE	0.33	50	50	ENSMUST00000210069.2	ENSMUSG00000020102.16	Slc16a7	chr10	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 7
chr10	125822765	125830287	+	125808336	125830287	A5SS	0.5	50	50	ENSMUST00000217813.2	ENSMUSG00000020105.10	Lrig3	chr10	protein_coding	leucine-rich repeats and immunoglobulin-like domains 3
chr10	126723563	126727509	-	126704594	126727509	A3SS	0.33	50	50	ENSMUST00000026504.13	ENSMUSG00000025436.13	Atp23	chr10	protein_coding	ATP23 metallopeptidase and ATP synthase assembly factor homolog
chr10	126726700	126727509	-	126704594	126727509	A3SS	0.33	50	50	ENSMUST00000026504.13	ENSMUSG00000025436.13	Atp23	chr10	protein_coding	ATP23 metallopeptidase and ATP synthase assembly factor homolog
chr10	126726700	126727509	-	126723563	126727509	A3SS	0.33	50	50	ENSMUST00000168520.3	ENSMUSG00000025436.13	Atp23	chr10	protein_coding	ATP23 metallopeptidase and ATP synthase assembly factor homolog
chr10	126815170	126816211	+	126815170	126827400	A3SS	0.5	50	50	ENSMUST00000105256.10	ENSMUSG00000078429.10	Ctdsp2	chr10	protein_coding	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
chr10	126836700;126838965	126838874;126839235	+	126836700	126839235	cassetteExon	0.5	100	100	ENSMUST00000026500.12	ENSMUSG00000025432.12	Avil	chr10	protein_coding	advillin
chr10	126836700;126839017	126838874;126839235	+	126836700	126839235	cassetteExon	0.5	100	100	ENSMUST00000026500.12	ENSMUSG00000025432.12	Avil	chr10	protein_coding	advillin
chr10	126838965	126839235	+	126839017	126839235	A5SS	0.33	50	50	ENSMUST00000142698.8	ENSMUSG00000025432.12	Avil	chr10	protein_coding	advillin
chr10	126836700	126839235	+	126838965	126839235	5pMXE	0.33	50	50	ENSMUST00000126816.8	ENSMUSG00000025432.12	Avil	chr10	protein_coding	advillin
chr10	126864356	126865423	-	126847732	126865423	A3SS	0.5	50	50	ENSMUST00000152054.8	ENSMUSG00000040521.12	Tsfm	chr10	protein_coding	Ts translation elongation factor, mitochondrial
chr10	126865551	126866069	-	126865551	126866332	A5SS	0.5	50	50	ENSMUST00000152054.8	ENSMUSG00000040521.12	Tsfm	chr10	protein_coding	Ts translation elongation factor, mitochondrial
chr10	126877939	126878929	+	126877590	126878929	A5SS	0.5	50	50	ENSMUST00000152960.2	ENSMUSG00000006732.15	Mettl1	chr10	protein_coding	methyltransferase like 1
chr10	126879092	126880625	+	126879092;126880520	126880336;126880625	ES	0.5	50	50	ENSMUST00000006915.14	ENSMUSG00000006732.15	Mettl1	chr10	protein_coding	methyltransferase like 1
chr10	126880738	126880866	+	126880738	126880895	A3SS	0.5	50	50	ENSMUST00000006915.14	ENSMUSG00000006732.15	Mettl1	chr10	protein_coding	methyltransferase like 1
chr10	126884344	126884908	+	126884344	126884934	A3SS	0.5	50	50	ENSMUST00000165764.8	ENSMUSG00000006724.13	Cyp27b1	chr10	protein_coding	cytochrome P450, family 27, subfamily b, polypeptide 1
chr10	126884670	126884934	+	126884344	126884934	A5SS	0.5	50	50	ENSMUST00000165764.8	ENSMUSG00000006724.13	Cyp27b1	chr10	protein_coding	cytochrome P450, family 27, subfamily b, polypeptide 1
chr10	126899628	126900454	+	126899628;126900322	126900089;126900454	ES	0.5	50	50	ENSMUST00000006911.12	ENSMUSG00000006728.13	Cdk4	chr10	protein_coding	cyclin-dependent kinase 4
chr10	126900322	126900704	+	126900322;126900589	126900454;126900704	ES	0.5	50	50	ENSMUST00000006911.12	ENSMUSG00000006728.13	Cdk4	chr10	protein_coding	cyclin-dependent kinase 4
chr10	126899628	126900071	+	126899628	126900089	A3SS	0.33	50	50	ENSMUST00000006911.12	ENSMUSG00000006728.13	Cdk4	chr10	protein_coding	cyclin-dependent kinase 4
chr10	126900322	126900704	+	126900322	126900454	A3SS&ES	0.5	50	50	ENSMUST00000120226.8	ENSMUSG00000006728.13	Cdk4	chr10	protein_coding	cyclin-dependent kinase 4
chr10	126899628	126900454	+	126899628;126900322	126900071;126900454	ES	0.5	50	50	ENSMUST00000133115.8	ENSMUSG00000006728.13	Cdk4	chr10	protein_coding	cyclin-dependent kinase 4
chr10	126899628;126900589	126900454;126900704	+	126899628;126900322	126900089;126900704	MXE	0.5	100	100	ENSMUST00000142558.8	ENSMUSG00000006728.13	Cdk4	chr10	protein_coding	cyclin-dependent kinase 4
chr10	126899628;126900322	126900071;126900704	+	126899628;126900589	126900454;126900704	MXE	0.5	100	100	ENSMUST00000135179.8	ENSMUSG00000006728.13	Cdk4	chr10	protein_coding	cyclin-dependent kinase 4
chr10	126899628	126900454	+	126900322	126900454	5pMXE	0.5	50	50	ENSMUST00000125682.2	ENSMUSG00000006728.13	Cdk4	chr10	protein_coding	cyclin-dependent kinase 4
chr10	126900322	126900704	+	126900589	126900704	A5SS	0.5	50	50	ENSMUST00000123456.2	ENSMUSG00000006728.13	Cdk4	chr10	protein_coding	cyclin-dependent kinase 4
chr10	126905320	126905984	-	126905382	126905984	A3SS	0.5	50	50	ENSMUST00000060991.6	ENSMUSG00000006736.10	Tspan31	chr10	protein_coding	tetraspanin 31
chr10	126905382	126905676	-	126905382	126905984	A5SS	0.5	50	50	ENSMUST00000060991.6	ENSMUSG00000006736.10	Tspan31	chr10	protein_coding	tetraspanin 31
chr10	126925227	126926296	+	126925227;126926070	126926011;126926296	ES	0.5	50	50	ENSMUST00000239120.2	ENSMUSG00000025422.11	Agap2	chr10	protein_coding	ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
chr10	126916640	126918233	+	126911460	126918233	A5SS	0.5	50	50	ENSMUST00000239120.2	ENSMUSG00000025422.11	Agap2	chr10	protein_coding	ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
chr10	126932611;126932948	126932784;126933801	-	126932611	126933801	cassetteExon	0.5	100	100	ENSMUST00000080975.6	ENSMUSG00000040462.14	Os9	chr10	protein_coding	amplified in osteosarcoma
chr10	127003411	127005613	+	127003411;127003750	127003570;127005613	ES	0.5	50	50	ENSMUST00000006914.11	ENSMUSG00000006731.11	B4galnt1	chr10	protein_coding	beta-1,4-N-acetyl-galactosaminyl transferase 1
chr10	127003411	127005613	+	127003411	127003570	3pMXE	0.5	50	50	ENSMUST00000219523.2	ENSMUSG00000006731.11	B4galnt1	chr10	protein_coding	beta-1,4-N-acetyl-galactosaminyl transferase 1
chr10	127019596	127019881	-	127019698	127019881	A3SS	0.5	50	50	ENSMUST00000220295.2	ENSMUSG00000019467.16	Arhgef25	chr10	protein_coding	Rho guanine nucleotide exchange factor (GEF) 25
chr10	127023191;127025219	127025105;127025364	-	127023191	127025364	cassetteExon	0.5	100	100	ENSMUST00000219649.2	ENSMUSG00000019467.16	Arhgef25	chr10	protein_coding	Rho guanine nucleotide exchange factor (GEF) 25
chr10	127021863	127021952	-	127021795	127021952	A3SS	0.5	50	50	ENSMUST00000219649.2	ENSMUSG00000019467.16	Arhgef25	chr10	protein_coding	Rho guanine nucleotide exchange factor (GEF) 25
chr10	127023191	127024120	-	127023191	127025364	A5SS	0.33	50	50	ENSMUST00000219649.2	ENSMUSG00000019467.16	Arhgef25	chr10	protein_coding	Rho guanine nucleotide exchange factor (GEF) 25
chr10	127025478	127025567	-	127025478	127025736	A5SS	0.33	50	50	ENSMUST00000219649.2	ENSMUSG00000019467.16	Arhgef25	chr10	protein_coding	Rho guanine nucleotide exchange factor (GEF) 25
chr10	127025478	127025848	-	127025478	127025736	A5SS	0.33	50	50	ENSMUST00000219649.2	ENSMUSG00000019467.16	Arhgef25	chr10	protein_coding	Rho guanine nucleotide exchange factor (GEF) 25
chr10	127023191	127025105	-	127023191	127024120	5pMXE	0.33	50	50	ENSMUST00000218654.2	ENSMUSG00000019467.16	Arhgef25	chr10	protein_coding	Rho guanine nucleotide exchange factor (GEF) 25
chr10	127025478	127025848	-	127025478	127025567	5pMXE	0.33	50	50	ENSMUST00000167353.3	ENSMUSG00000019467.16	Arhgef25	chr10	protein_coding	Rho guanine nucleotide exchange factor (GEF) 25
chr10	127029207	127029599	-	127029226	127029599	A3SS	0.33	50	50	ENSMUST00000038217.14	ENSMUSG00000040415.16	Dtx3	chr10	protein_coding	deltex 3, E3 ubiquitin ligase
chr10	127030342	127031563	-	127030503	127031563	A3SS	0.33	50	50	ENSMUST00000038217.14	ENSMUSG00000040415.16	Dtx3	chr10	protein_coding	deltex 3, E3 ubiquitin ligase
chr10	127030681	127031563	-	127030503	127031563	A3SS	0.33	50	50	ENSMUST00000038217.14	ENSMUSG00000040415.16	Dtx3	chr10	protein_coding	deltex 3, E3 ubiquitin ligase
chr10	127026908	127029599	-	127029226	127029599	A3SS&ES	0.33	50	50	ENSMUST00000116229.2	ENSMUSG00000040415.16	Dtx3	chr10	protein_coding	deltex 3, E3 ubiquitin ligase
chr10	127029207	127029599	-	127026908	127029599	A3SS	0.33	50	50	ENSMUST00000137151.8	ENSMUSG00000040415.16	Dtx3	chr10	protein_coding	deltex 3, E3 ubiquitin ligase
chr10	127026908	127027205	-	127026908	127029599	A5SS	0.5	50	50	ENSMUST00000137151.8	ENSMUSG00000040415.16	Dtx3	chr10	protein_coding	deltex 3, E3 ubiquitin ligase
chr10	127030342	127031563	-	127030342;127030681	127030551;127031563	ES	0.33	50	50	ENSMUST00000144322.8	ENSMUSG00000040415.16	Dtx3	chr10	protein_coding	deltex 3, E3 ubiquitin ligase
chr10	127031336	127033006	+	127032736	127033006	A5SS&ES	0.5	50	50	ENSMUST00000219079.2	ENSMUSG00000097331.3	F420014N23Rik	chr10	lncRNA	RIKEN cDNA F420014N23 gene
chr10	127073711	127084061	-	127083972	127084061	A3SS&ES	0.5	50	50	ENSMUST00000099172.5	ENSMUSG00000074657.6	Kif5a	chr10	protein_coding	kinesin family member 5A
chr10	127119313	127119912	-	127119313	127119395	5pMXE	0.5	50	50	ENSMUST00000136169.8	ENSMUSG00000025409.15	Mbd6	chr10	protein_coding	methyl-CpG binding domain protein 6
chr10	127119031	127119261	-	127118957	127119261	A3SS	0.5	50	50	ENSMUST00000136169.8	ENSMUSG00000025409.15	Mbd6	chr10	protein_coding	methyl-CpG binding domain protein 6
chr10	127119313	127119912	-	127119313;127119811	127119395;127119912	ES	0.33	50	50	ENSMUST00000126243.9	ENSMUSG00000025409.15	Mbd6	chr10	protein_coding	methyl-CpG binding domain protein 6
chr10	127119808	127119912	-	127119811	127119912	A3SS	0.33	50	50	ENSMUST00000126243.9	ENSMUSG00000025409.15	Mbd6	chr10	protein_coding	methyl-CpG binding domain protein 6
chr10	127120084	127120204	-	127120081	127120204	A3SS	0.5	50	50	ENSMUST00000126243.9	ENSMUSG00000025409.15	Mbd6	chr10	protein_coding	methyl-CpG binding domain protein 6
chr10	127119313	127119912	-	127119313;127119808	127119395;127119912	ES	0.33	50	50	ENSMUST00000119078.8	ENSMUSG00000025409.15	Mbd6	chr10	protein_coding	methyl-CpG binding domain protein 6
chr10	127119313	127119912	-	127119808	127119912	3pMXE	0.33	50	50	ENSMUST00000172567.3	ENSMUSG00000025409.15	Mbd6	chr10	protein_coding	methyl-CpG binding domain protein 6
chr10	127126760	127131190	+	127126760;127129628	127129581;127131190	ES	0.5	50	50	ENSMUST00000026475.15	ENSMUSG00000025408.16	Ddit3	chr10	protein_coding	DNA-damage inducible transcript 3
chr10	127126760	127131190	+	127126760	127129581	3pMXE	0.5	50	50	ENSMUST00000134686.2	ENSMUSG00000025408.16	Ddit3	chr10	protein_coding	DNA-damage inducible transcript 3
chr10	127132502;127132609	127132586;127132742	-	127132502	127132742	cassetteExon	0.5	100	100	ENSMUST00000037290.12	ENSMUSG00000040354.15	Mars1	chr10	protein_coding	methionine-tRNA synthetase 1
chr10	127159699	127160988	+	127158759	127160988	A5SS	0.33	50	50	ENSMUST00000219511.2	ENSMUSG00000040345.11	Arhgap9	chr10	protein_coding	Rho GTPase activating protein 9
chr10	127160328	127160988	+	127158759	127160988	A5SS	0.33	50	50	ENSMUST00000219511.2	ENSMUSG00000040345.11	Arhgap9	chr10	protein_coding	Rho GTPase activating protein 9
chr10	127164884	127165368	+	127164852	127165368	A5SS	0.5	50	50	ENSMUST00000219511.2	ENSMUSG00000040345.11	Arhgap9	chr10	protein_coding	Rho GTPase activating protein 9
chr10	127159699	127160988	+	127159699;127160328	127160214;127160988	ES	0.5	50	50	ENSMUST00000219026.2	ENSMUSG00000040345.11	Arhgap9	chr10	protein_coding	Rho GTPase activating protein 9
chr10	127174415;127174650	127174532;127177074	-	127174415	127177074	cassetteExon	0.5	100	100	ENSMUST00000026474.5	ENSMUSG00000025407.8	Gli1	chr10	protein_coding	GLI-Kruppel family member GLI1
chr10	127172438	127172508	-	127172418	127172508	A3SS	0.5	50	50	ENSMUST00000026474.5	ENSMUSG00000025407.8	Gli1	chr10	protein_coding	GLI-Kruppel family member GLI1
chr10	127174650	127177074	-	127174650	127175786	5pMXE	0.5	50	50	ENSMUST00000218236.2	ENSMUSG00000025407.8	Gli1	chr10	protein_coding	GLI-Kruppel family member GLI1
chr10	127236062;127254589	127254380;127280145	+	127236062	127280145	cassetteExon	0.5	100	100	ENSMUST00000170164.8	ENSMUSG00000025404.16	R3hdm2	chr10	protein_coding	R3H domain containing 2
chr10	127216805	127226180	+	127216301	127226180	A5SS	0.5	50	50	ENSMUST00000170164.8	ENSMUSG00000025404.16	R3hdm2	chr10	protein_coding	R3H domain containing 2
chr10	127256305	127280145	+	127236062	127280145	A5SS	0.2	50	50	ENSMUST00000170164.8	ENSMUSG00000025404.16	R3hdm2	chr10	protein_coding	R3H domain containing 2
chr10	127257217	127280145	+	127236062	127280145	A5SS	0.2	50	50	ENSMUST00000170164.8	ENSMUSG00000025404.16	R3hdm2	chr10	protein_coding	R3H domain containing 2
chr10	127257235	127280145	+	127236062	127280145	A5SS	0.2	50	50	ENSMUST00000170164.8	ENSMUSG00000025404.16	R3hdm2	chr10	protein_coding	R3H domain containing 2
chr10	127295444	127300851	+	127295444;127298152	127298057;127300851	ES	0.5	50	50	ENSMUST00000166820.8	ENSMUSG00000025404.16	R3hdm2	chr10	protein_coding	R3H domain containing 2
chr10	127300882	127307637	+	127300882;127301053	127301000;127307637	ES	0.5	50	50	ENSMUST00000166820.8	ENSMUSG00000025404.16	R3hdm2	chr10	protein_coding	R3H domain containing 2
chr10	127312567	127319845	+	127312567;127317663	127317562;127319845	ES	0.25	50	50	ENSMUST00000166820.8	ENSMUSG00000025404.16	R3hdm2	chr10	protein_coding	R3H domain containing 2
chr10	127280344;127284726	127284704;127287861	+	127280344	127287861	cassetteExon	0.5	100	100	ENSMUST00000166820.8	ENSMUSG00000025404.16	R3hdm2	chr10	protein_coding	R3H domain containing 2
chr10	127317663;127318476	127318368;127319845	+	127317663	127319845	cassetteExon	0.5	100	100	ENSMUST00000166820.8	ENSMUSG00000025404.16	R3hdm2	chr10	protein_coding	R3H domain containing 2
chr10	127295444	127298075	+	127295444	127298057	A3SS	0.33	50	50	ENSMUST00000166820.8	ENSMUSG00000025404.16	R3hdm2	chr10	protein_coding	R3H domain containing 2
chr10	127323744	127328459	+	127323744	127328438	A3SS	0.5	50	50	ENSMUST00000166820.8	ENSMUSG00000025404.16	R3hdm2	chr10	protein_coding	R3H domain containing 2
chr10	127333128	127334627	+	127333128	127333410	A3SS&ES	0.5	50	50	ENSMUST00000166820.8	ENSMUSG00000025404.16	R3hdm2	chr10	protein_coding	R3H domain containing 2
chr10	127317624	127319845	+	127317663	127319845	A5SS	0.25	50	50	ENSMUST00000166820.8	ENSMUSG00000025404.16	R3hdm2	chr10	protein_coding	R3H domain containing 2
chr10	127256305	127280145	+	127254589	127280145	A5SS	0.2	50	50	ENSMUST00000111628.9	ENSMUSG00000025404.16	R3hdm2	chr10	protein_coding	R3H domain containing 2
chr10	127257217	127280145	+	127254589	127280145	A5SS	0.2	50	50	ENSMUST00000111628.9	ENSMUSG00000025404.16	R3hdm2	chr10	protein_coding	R3H domain containing 2
chr10	127257235	127280145	+	127254589	127280145	A5SS	0.2	50	50	ENSMUST00000111628.9	ENSMUSG00000025404.16	R3hdm2	chr10	protein_coding	R3H domain containing 2
chr10	127257217	127280145	+	127256305	127280145	A5SS	0.2	50	50	ENSMUST00000171434.8	ENSMUSG00000025404.16	R3hdm2	chr10	protein_coding	R3H domain containing 2
chr10	127257235	127280145	+	127256305	127280145	A5SS	0.2	50	50	ENSMUST00000171434.8	ENSMUSG00000025404.16	R3hdm2	chr10	protein_coding	R3H domain containing 2
chr10	127312567	127319845	+	127312567;127317624	127317562;127319845	ES	0.25	50	50	ENSMUST00000064793.13	ENSMUSG00000025404.16	R3hdm2	chr10	protein_coding	R3H domain containing 2
chr10	127295444;127298152	127298075;127300851	+	127295444	127300851	cassetteExon	0.5	100	100	ENSMUST00000064793.13	ENSMUSG00000025404.16	R3hdm2	chr10	protein_coding	R3H domain containing 2
chr10	127257217	127280145	+	127257235	127280145	A5SS	0.2	50	50	ENSMUST00000064793.13	ENSMUSG00000025404.16	R3hdm2	chr10	protein_coding	R3H domain containing 2
chr10	127318476	127319845	+	127317624	127319845	A5SS	0.25	50	50	ENSMUST00000064793.13	ENSMUSG00000025404.16	R3hdm2	chr10	protein_coding	R3H domain containing 2
chr10	127318476	127319845	+	127312567	127319845	A5SS	0.25	50	50	ENSMUST00000164831.8	ENSMUSG00000025404.16	R3hdm2	chr10	protein_coding	R3H domain containing 2
chr10	127300882	127307637	+	127300882	127301000	3pMXE	0.5	50	50	ENSMUST00000165440.8	ENSMUSG00000025404.16	R3hdm2	chr10	protein_coding	R3H domain containing 2
chr10	127312567	127319845	+	127317663	127319845	5pMXE	0.25	50	50	ENSMUST00000164469.2	ENSMUSG00000025404.16	R3hdm2	chr10	protein_coding	R3H domain containing 2
chr10	127337778	127338551	+	127337605	127338551	A5SS	0.33	50	50	ENSMUST00000160019.8	ENSMUSG00000040287.10	Stac3	chr10	protein_coding	SH3 and cysteine rich domain 3
chr10	127337853	127338551	+	127337605	127338551	A5SS	0.33	50	50	ENSMUST00000160019.8	ENSMUSG00000040287.10	Stac3	chr10	protein_coding	SH3 and cysteine rich domain 3
chr10	127337853	127338551	+	127337778	127338551	A5SS	0.33	50	50	ENSMUST00000160610.2	ENSMUSG00000040287.10	Stac3	chr10	protein_coding	SH3 and cysteine rich domain 3
chr10	127350907;127351356	127351268;127352134	+	127350907	127352134	cassetteExon	0.5	100	100	ENSMUST00000218492.2	ENSMUSG00000040280.11	Ndufa4l2	chr10	protein_coding	Ndufa4, mitochondrial complex associated like 2
chr10	127350907;127351651	127351268;127352134	+	127350907	127352134	cassetteExon	0.5	100	100	ENSMUST00000218492.2	ENSMUSG00000040280.11	Ndufa4l2	chr10	protein_coding	Ndufa4, mitochondrial complex associated like 2
chr10	127351356	127352134	+	127351356;127351651	127351491;127352134	ES	0.33	50	50	ENSMUST00000218302.2	ENSMUSG00000040280.11	Ndufa4l2	chr10	protein_coding	Ndufa4, mitochondrial complex associated like 2
chr10	127356984	127358157	-	127356975	127358157	A3SS	0.33	50	50	ENSMUST00000219239.2	ENSMUSG00000025403.6	Shmt2	chr10	protein_coding	serine hydroxymethyltransferase 2 (mitochondrial)
chr10	127356040	127358157	-	127356040	127356207	A5SS&ES	0.5	50	50	ENSMUST00000218258.2	ENSMUSG00000025403.6	Shmt2	chr10	protein_coding	serine hydroxymethyltransferase 2 (mitochondrial)
chr10	127356975	127358157	-	127356040	127358157	A3SS	0.33	50	50	ENSMUST00000218313.2	ENSMUSG00000025403.6	Shmt2	chr10	protein_coding	serine hydroxymethyltransferase 2 (mitochondrial)
chr10	127356984	127358157	-	127356040	127358157	A3SS	0.33	50	50	ENSMUST00000218313.2	ENSMUSG00000025403.6	Shmt2	chr10	protein_coding	serine hydroxymethyltransferase 2 (mitochondrial)
chr10	127417758;127418609	127418559;127419250	-	127417758	127419250	cassetteExon	0.5	100	100	ENSMUST00000049149.15	ENSMUSG00000040249.16	Lrp1	chr10	protein_coding	low density lipoprotein receptor-related protein 1
chr10	127385372	127385777	-	127385302	127385777	A3SS	0.5	50	50	ENSMUST00000049149.15	ENSMUSG00000040249.16	Lrp1	chr10	protein_coding	low density lipoprotein receptor-related protein 1
chr10	127436770	127441278	-	127431316	127441278	A3SS	0.5	50	50	ENSMUST00000049149.15	ENSMUSG00000040249.16	Lrp1	chr10	protein_coding	low density lipoprotein receptor-related protein 1
chr10	127483692	127486565	+	127483692;127484058	127483975;127486565	ES	0.5	50	50	ENSMUST00000092074.12	ENSMUSG00000002147.19	Stat6	chr10	protein_coding	signal transducer and activator of transcription 6
chr10	127497648	127499001	-	127497648;127498791	127498600;127499001	ES	0.5	50	50	ENSMUST00000026469.9	ENSMUSG00000025402.13	Nab2	chr10	protein_coding	Ngfi-A binding protein 2
chr10	127501007	127501165	-	127501007	127502245	A5SS	0.5	50	50	ENSMUST00000026469.9	ENSMUSG00000025402.13	Nab2	chr10	protein_coding	Ngfi-A binding protein 2
chr10	127503252	127504287	+	127502987	127504287	A5SS	0.5	50	50	ENSMUST00000133505.2	ENSMUSG00000040195.12	Nemp1	chr10	protein_coding	nuclear envelope integral membrane protein 1
chr10	127503252	127512509	+	127503252	127504287	3pMXE	0.33	50	50	ENSMUST00000124388.2	ENSMUSG00000040195.12	Nemp1	chr10	protein_coding	nuclear envelope integral membrane protein 1
chr10	127503252	127504295	+	127503252	127504287	A3SS	0.33	50	50	ENSMUST00000124388.2	ENSMUSG00000040195.12	Nemp1	chr10	protein_coding	nuclear envelope integral membrane protein 1
chr10	127503252	127504295	+	127503252	127512509	A3SS	0.33	50	50	ENSMUST00000118728.8	ENSMUSG00000040195.12	Nemp1	chr10	protein_coding	nuclear envelope integral membrane protein 1
chr10	127513096	127524102	+	127515004	127524102	A5SS&ES	0.5	50	50	ENSMUST00000118728.8	ENSMUSG00000040195.12	Nemp1	chr10	protein_coding	nuclear envelope integral membrane protein 1
chr10	127596119	127598834	+	127596119	127624477	A3SS	0.5	50	50	ENSMUST00000128247.2	ENSMUSG00000099009.2	Rdh16f1	chr10	protein_coding	RDH16 family member 1
chr10	127612666	127624477	+	127596119	127624477	A5SS	0.5	50	50	ENSMUST00000128247.2	ENSMUSG00000099009.2	Rdh16f1	chr10	protein_coding	RDH16 family member 1
chr10	127612666	127618035	+	127612666	127624477	A3SS	0.5	50	50	ENSMUST00000128133.2	ENSMUSG00000056148.9	Rdh9	chr10	protein_coding	retinol dehydrogenase 9
chr10	127648818	127678981	+	127648818	127649282	3pMXE	0.5	50	50	ENSMUST00000155739.2	ENSMUSG00000069456.5	Rdh16	chr10	protein_coding	retinol dehydrogenase 16
chr10	127637379;127647181	127646923;127648655	+	127637379	127648655	cassetteExon	0.5	100	100	ENSMUST00000155739.2	ENSMUSG00000069456.5	Rdh16	chr10	protein_coding	retinol dehydrogenase 16
chr10	127637135	127648655	+	127637379	127648655	A5SS	0.33	50	50	ENSMUST00000155739.2	ENSMUSG00000069456.5	Rdh16	chr10	protein_coding	retinol dehydrogenase 16
chr10	127647181	127648655	+	127637135	127648655	A5SS	0.33	50	50	ENSMUST00000125163.2	ENSMUSG00000069456.5	Rdh16	chr10	protein_coding	retinol dehydrogenase 16
chr10	127677837	127678981	+	127648818	127678981	A5SS	0.5	50	50	ENSMUST00000125163.2	ENSMUSG00000069456.5	Rdh16	chr10	protein_coding	retinol dehydrogenase 16
chr10	127679139	127679590	+	127679143	127679590	A5SS	0.5	50	50	ENSMUST00000125163.2	ENSMUSG00000069456.5	Rdh16	chr10	protein_coding	retinol dehydrogenase 16
chr10	127734789	127738025	+	127734814	127738025	A5SS	0.5	50	50	ENSMUST00000047134.8	ENSMUSG00000040127.14	Sdr9c7	chr10	protein_coding	4short chain dehydrogenase/reductase family 9C, member 7
chr10	127739342	127739447	+	127738283	127739447	A5SS	0.5	50	50	ENSMUST00000047134.8	ENSMUSG00000040127.14	Sdr9c7	chr10	protein_coding	4short chain dehydrogenase/reductase family 9C, member 7
chr10	127833893	127836420	-	127833893	127836431	A5SS	0.5	50	50	ENSMUST00000219447.2	ENSMUSG00000025396.8	Hsd17b6	chr10	protein_coding	hydroxysteroid (17-beta) dehydrogenase 6
chr10	127836545	127843352	-	127836545	127843314	A5SS	0.5	50	50	ENSMUST00000219447.2	ENSMUSG00000025396.8	Hsd17b6	chr10	protein_coding	hydroxysteroid (17-beta) dehydrogenase 6
chr10	127836540	127843352	-	127836545	127843352	A3SS	0.5	50	50	ENSMUST00000219183.2	ENSMUSG00000025396.8	Hsd17b6	chr10	protein_coding	hydroxysteroid (17-beta) dehydrogenase 6
chr10	127858841	127859452	+	127858841	127859449	A3SS	0.5	50	50	ENSMUST00000178041.8	ENSMUSG00000025395.15	Prim1	chr10	protein_coding	DNA primase, p49 subunit
chr10	127872429	127875040	+	127872429	127882037	A3SS	0.5	50	50	ENSMUST00000073868.9	ENSMUSG00000061315.15	Naca	chr10	protein_coding	nascent polypeptide-associated complex alpha polypeptide
chr10	127880955	127882037	+	127872429	127882037	A5SS	0.5	50	50	ENSMUST00000073868.9	ENSMUSG00000061315.15	Naca	chr10	protein_coding	nascent polypeptide-associated complex alpha polypeptide
chr10	127872429	127882037	+	127872429;127880955	127875040;127882037	ES	0.5	50	50	ENSMUST00000092048.13	ENSMUSG00000061315.15	Naca	chr10	protein_coding	nascent polypeptide-associated complex alpha polypeptide
chr10	127906101	127910091	+	127906101;127908026	127907937;127910091	ES	0.5	50	50	ENSMUST00000052798.14	ENSMUSG00000071072.13	Ptges3	chr10	protein_coding	prostaglandin E synthase 3
chr10	127906101	127910091	+	127906101	127907937	3pMXE	0.5	50	50	ENSMUST00000148943.2	ENSMUSG00000071072.13	Ptges3	chr10	protein_coding	prostaglandin E synthase 3
chr10	127925027	127925861	+	127925027	127925888	A3SS	0.5	50	50	ENSMUST00000026459.6	ENSMUSG00000025393.13	Atp5b	chr10	protein_coding	ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
chr10	127924441	127924826	+	127924402	127924826	A5SS	0.5	50	50	ENSMUST00000026459.6	ENSMUSG00000025393.13	Atp5b	chr10	protein_coding	ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
chr10	127927645	127932308	+	127927645;127928719	127928329;127932308	ES	0.5	50	50	ENSMUST00000218772.2	ENSMUSG00000040054.18	Baz2a	chr10	protein_coding	bromodomain adjacent to zinc finger domain, 2A
chr10	127948636	127949329	+	127948636	127949332	A3SS	0.5	50	50	ENSMUST00000218772.2	ENSMUSG00000040054.18	Baz2a	chr10	protein_coding	bromodomain adjacent to zinc finger domain, 2A
chr10	127927645;127932392	127932308;127944763	+	127927645	127944763	cassetteExon	0.5	100	100	ENSMUST00000238829.2	ENSMUSG00000040054.18	Baz2a	chr10	protein_coding	bromodomain adjacent to zinc finger domain, 2A
chr10	127927645	127928329	+	127927645	127944763	A3SS	0.33	50	50	ENSMUST00000238829.2	ENSMUSG00000040054.18	Baz2a	chr10	protein_coding	bromodomain adjacent to zinc finger domain, 2A
chr10	127927645	127932308	+	127928719	127932308	5pMXE	0.5	50	50	ENSMUST00000219072.2	ENSMUSG00000040054.18	Baz2a	chr10	protein_coding	bromodomain adjacent to zinc finger domain, 2A
chr10	127927645	127944763	+	127932392	127944763	5pMXE	0.5	50	50	ENSMUST00000219980.2	ENSMUSG00000040054.18	Baz2a	chr10	protein_coding	bromodomain adjacent to zinc finger domain, 2A
chr10	127970976	127973343	-	127970976;127971600	127971523;127973343	ES	0.5	50	50	ENSMUST00000238843.2	ENSMUSG00000040043.18	Rbms2	chr10	protein_coding	RNA binding motif, single stranded interacting protein 2
chr10	127987224	128012219	-	127987224	128015662	A5SS	0.5	50	50	ENSMUST00000238843.2	ENSMUSG00000040043.18	Rbms2	chr10	protein_coding	RNA binding motif, single stranded interacting protein 2
chr10	128035627	128036755	+	128035627;128036171	128036042;128036755	ES	0.5	50	50	ENSMUST00000044776.13	ENSMUSG00000044005.14	Gls2	chr10	protein_coding	glutaminase 2 (liver, mitochondrial)
chr10	128036171	128037075	+	128036171;128036834	128036755;128037075	ES	0.5	50	50	ENSMUST00000044776.13	ENSMUSG00000044005.14	Gls2	chr10	protein_coding	glutaminase 2 (liver, mitochondrial)
chr10	128030776;128031049	128030925;128035051	+	128030776	128035051	cassetteExon	0.5	100	100	ENSMUST00000044776.13	ENSMUSG00000044005.14	Gls2	chr10	protein_coding	glutaminase 2 (liver, mitochondrial)
chr10	128035627	128036013	+	128035627	128036042	A3SS	0.33	50	50	ENSMUST00000044776.13	ENSMUSG00000044005.14	Gls2	chr10	protein_coding	glutaminase 2 (liver, mitochondrial)
chr10	128042872	128043170	+	128042872	128043167	A3SS	0.5	50	50	ENSMUST00000044776.13	ENSMUSG00000044005.14	Gls2	chr10	protein_coding	glutaminase 2 (liver, mitochondrial)
chr10	128030715	128035051	+	128030776	128035051	A5SS	0.33	50	50	ENSMUST00000044776.13	ENSMUSG00000044005.14	Gls2	chr10	protein_coding	glutaminase 2 (liver, mitochondrial)
chr10	128039608	128039692	+	128037486	128039692	A5SS	0.5	50	50	ENSMUST00000044776.13	ENSMUSG00000044005.14	Gls2	chr10	protein_coding	glutaminase 2 (liver, mitochondrial)
chr10	128030715	128035051	+	128031049	128035051	A5SS&ES	0.33	50	50	ENSMUST00000123291.2	ENSMUSG00000044005.14	Gls2	chr10	protein_coding	glutaminase 2 (liver, mitochondrial)
chr10	128035627;128036171	128036013;128036755	+	128035627	128036755	cassetteExon	0.5	100	100	ENSMUST00000143827.8	ENSMUSG00000044005.14	Gls2	chr10	protein_coding	glutaminase 2 (liver, mitochondrial)
chr10	128035627;128036171	128036013;128037075	+	128035627;128036834	128036755;128037075	MXE	0.5	100	100	ENSMUST00000143827.8	ENSMUSG00000044005.14	Gls2	chr10	protein_coding	glutaminase 2 (liver, mitochondrial)
chr10	128035627;128036171	128036042;128037075	+	128035627;128036834	128036755;128037075	MXE	0.5	100	100	ENSMUST00000143827.8	ENSMUSG00000044005.14	Gls2	chr10	protein_coding	glutaminase 2 (liver, mitochondrial)
chr10	128068044	128075711	+	128068044	128075703	A3SS	0.5	50	50	ENSMUST00000055539.11	ENSMUSG00000039994.16	Timeless	chr10	protein_coding	timeless circadian clock 1
chr10	128079240	128079645	+	128079240	128079939	A3SS	0.5	50	50	ENSMUST00000055539.11	ENSMUSG00000039994.16	Timeless	chr10	protein_coding	timeless circadian clock 1
chr10	128085979	128086157	+	128085979	128086154	A3SS	0.5	50	50	ENSMUST00000055539.11	ENSMUSG00000039994.16	Timeless	chr10	protein_coding	timeless circadian clock 1
chr10	128087957	128088064	+	128087957	128088061	A3SS	0.5	50	50	ENSMUST00000055539.11	ENSMUSG00000039994.16	Timeless	chr10	protein_coding	timeless circadian clock 1
chr10	128073990	128075703	+	128068044	128075703	A5SS	0.5	50	50	ENSMUST00000055539.11	ENSMUSG00000039994.16	Timeless	chr10	protein_coding	timeless circadian clock 1
chr10	128075922	128076007	+	128075866	128076007	A5SS	0.5	50	50	ENSMUST00000055539.11	ENSMUSG00000039994.16	Timeless	chr10	protein_coding	timeless circadian clock 1
chr10	128119026	128119099	+	128119026	128119102	A3SS	0.5	50	50	ENSMUST00000085708.3	ENSMUSG00000040033.17	Stat2	chr10	protein_coding	signal transducer and activator of transcription 2
chr10	128119185;128119688	128119353;128119796	+	128119185	128119796	cassetteExon	0.5	100	100	ENSMUST00000217727.2	ENSMUSG00000040033.17	Stat2	chr10	protein_coding	signal transducer and activator of transcription 2
chr10	128119185	128119796	+	128119688	128119796	5pMXE	0.5	50	50	ENSMUST00000218862.2	ENSMUSG00000040033.17	Stat2	chr10	protein_coding	signal transducer and activator of transcription 2
chr10	128140362	128143988	+	128140362	128143934	A3SS	0.5	50	50	ENSMUST00000005825.8	ENSMUSG00000005682.10	Pan2	chr10	protein_coding	PAN2 poly(A) specific ribonuclease subunit
chr10	128151105	128151383	+	128151105	128151356	A3SS	0.5	50	50	ENSMUST00000005825.8	ENSMUSG00000005682.10	Pan2	chr10	protein_coding	PAN2 poly(A) specific ribonuclease subunit
chr10	128140258	128143934	+	128140362	128143934	A5SS	0.5	50	50	ENSMUST00000005825.8	ENSMUSG00000005682.10	Pan2	chr10	protein_coding	PAN2 poly(A) specific ribonuclease subunit
chr10	128154234	128154814	+	128154211	128154814	A5SS	0.5	50	50	ENSMUST00000005825.8	ENSMUSG00000005682.10	Pan2	chr10	protein_coding	PAN2 poly(A) specific ribonuclease subunit
chr10	128158399	128159199	+	128158644	128159199	A5SS	0.25	50	50	ENSMUST00000219037.2	ENSMUSG00000025381.4	Cnpy2	chr10	protein_coding	canopy FGF signaling regulator 2
chr10	128158587	128159199	+	128158644	128159199	A5SS	0.25	50	50	ENSMUST00000219037.2	ENSMUSG00000025381.4	Cnpy2	chr10	protein_coding	canopy FGF signaling regulator 2
chr10	128158931	128159199	+	128158644	128159199	A5SS	0.25	50	50	ENSMUST00000219037.2	ENSMUSG00000025381.4	Cnpy2	chr10	protein_coding	canopy FGF signaling regulator 2
chr10	128158587	128159199	+	128158399	128159199	A5SS	0.25	50	50	ENSMUST00000026446.4	ENSMUSG00000025381.4	Cnpy2	chr10	protein_coding	canopy FGF signaling regulator 2
chr10	128158931	128159199	+	128158399	128159199	A5SS	0.25	50	50	ENSMUST00000026446.4	ENSMUSG00000025381.4	Cnpy2	chr10	protein_coding	canopy FGF signaling regulator 2
chr10	128158931	128159199	+	128158587	128159199	A5SS	0.25	50	50	ENSMUST00000219836.2	ENSMUSG00000025381.4	Cnpy2	chr10	protein_coding	canopy FGF signaling regulator 2
chr10	128200375	128203876	-	128200375;128201084	128200892;128203876	ES	0.33	50	50	ENSMUST00000220027.2	ENSMUSG00000039914.7	Coq10a	chr10	protein_coding	coenzyme Q10A
chr10	128204022	128204567	-	128204022	128204388	5pMXE	0.5	50	50	ENSMUST00000220027.2	ENSMUSG00000039914.7	Coq10a	chr10	protein_coding	coenzyme Q10A
chr10	128201114	128203876	-	128201084	128203876	A3SS	0.33	50	50	ENSMUST00000220027.2	ENSMUSG00000039914.7	Coq10a	chr10	protein_coding	coenzyme Q10A
chr10	128200375	128203876	-	128200375;128201114	128200892;128203876	ES	0.33	50	50	ENSMUST00000043211.7	ENSMUSG00000039914.7	Coq10a	chr10	protein_coding	coenzyme Q10A
chr10	128200375	128203876	-	128200375	128200892	5pMXE	0.5	50	50	ENSMUST00000219934.2	ENSMUSG00000039914.7	Coq10a	chr10	protein_coding	coenzyme Q10A
chr10	128200375	128203876	-	128201084	128203876	3pMXE	0.33	50	50	ENSMUST00000219815.2	ENSMUSG00000039914.7	Coq10a	chr10	protein_coding	coenzyme Q10A
chr10	128236025	128236101	-	128236025	128236303	A5SS	0.33	50	50	ENSMUST00000042666.13	ENSMUSG00000039878.14	Slc39a5	chr10	protein_coding	solute carrier family 39 (metal ion transporter), member 5
chr10	128236025	128236276	-	128236025	128236303	A5SS	0.33	50	50	ENSMUST00000042666.13	ENSMUSG00000039878.14	Slc39a5	chr10	protein_coding	solute carrier family 39 (metal ion transporter), member 5
chr10	128236025	128236276	-	128236025	128236101	A5SS	0.33	50	50	ENSMUST00000167859.2	ENSMUSG00000039878.14	Slc39a5	chr10	protein_coding	solute carrier family 39 (metal ion transporter), member 5
chr10	128244705	128244948	-	128244705	128245116	A5SS	0.5	50	50	ENSMUST00000164199.8	ENSMUSG00000025374.14	Nabp2	chr10	protein_coding	nucleic acid binding protein 2
chr10	128245217	128246283	-	128245217	128245605	5pMXE	0.16	50	50	ENSMUST00000026439.14	ENSMUSG00000025374.14	Nabp2	chr10	protein_coding	nucleic acid binding protein 2
chr10	128245217	128246847	-	128245217	128245605	5pMXE	0.16	50	50	ENSMUST00000026439.14	ENSMUSG00000025374.14	Nabp2	chr10	protein_coding	nucleic acid binding protein 2
chr10	128245217	128245357	-	128245217	128245605	A5SS	0.16	50	50	ENSMUST00000026439.14	ENSMUSG00000025374.14	Nabp2	chr10	protein_coding	nucleic acid binding protein 2
chr10	128245217	128245376	-	128245217	128245605	A5SS	0.16	50	50	ENSMUST00000026439.14	ENSMUSG00000025374.14	Nabp2	chr10	protein_coding	nucleic acid binding protein 2
chr10	128245217	128245525	-	128245217	128245605	A5SS	0.16	50	50	ENSMUST00000026439.14	ENSMUSG00000025374.14	Nabp2	chr10	protein_coding	nucleic acid binding protein 2
chr10	128245217	128246283	-	128245217	128245525	5pMXE	0.16	50	50	ENSMUST00000166608.8	ENSMUSG00000025374.14	Nabp2	chr10	protein_coding	nucleic acid binding protein 2
chr10	128245217	128246847	-	128245217	128245525	5pMXE	0.16	50	50	ENSMUST00000166608.8	ENSMUSG00000025374.14	Nabp2	chr10	protein_coding	nucleic acid binding protein 2
chr10	128245217	128245357	-	128245217	128245525	A5SS	0.16	50	50	ENSMUST00000166608.8	ENSMUSG00000025374.14	Nabp2	chr10	protein_coding	nucleic acid binding protein 2
chr10	128245217	128245376	-	128245217	128245525	A5SS	0.16	50	50	ENSMUST00000166608.8	ENSMUSG00000025374.14	Nabp2	chr10	protein_coding	nucleic acid binding protein 2
chr10	128245217	128246283	-	128245217	128245376	5pMXE	0.16	50	50	ENSMUST00000172348.8	ENSMUSG00000025374.14	Nabp2	chr10	protein_coding	nucleic acid binding protein 2
chr10	128245217	128246847	-	128245217	128245376	5pMXE	0.16	50	50	ENSMUST00000172348.8	ENSMUSG00000025374.14	Nabp2	chr10	protein_coding	nucleic acid binding protein 2
chr10	128245217	128245357	-	128245217	128245376	A5SS	0.16	50	50	ENSMUST00000172348.8	ENSMUSG00000025374.14	Nabp2	chr10	protein_coding	nucleic acid binding protein 2
chr10	128245217	128246847	-	128245217	128246283	5pMXE	0.16	50	50	ENSMUST00000164664.8	ENSMUSG00000025374.14	Nabp2	chr10	protein_coding	nucleic acid binding protein 2
chr10	128245217	128245357	-	128245217	128246283	A5SS	0.16	50	50	ENSMUST00000164664.8	ENSMUSG00000025374.14	Nabp2	chr10	protein_coding	nucleic acid binding protein 2
chr10	128245217	128245357	-	128245217	128246847	A5SS	0.16	50	50	ENSMUST00000171494.8	ENSMUSG00000025374.14	Nabp2	chr10	protein_coding	nucleic acid binding protein 2
chr10	128264572	128272337	+	128264572;128271453	128271182;128272337	ES	0.33	50	50	ENSMUST00000171342.3	ENSMUSG00000025373.15	Rnf41	chr10	protein_coding	ring finger protein 41
chr10	128264572;128268186	128268066;128272337	+	128264572;128271453	128271182;128272337	MXE	0.5	100	100	ENSMUST00000171342.3	ENSMUSG00000025373.15	Rnf41	chr10	protein_coding	ring finger protein 41
chr10	128274328	128274677	+	128274328	128275382	A3SS	0.5	50	50	ENSMUST00000171342.3	ENSMUSG00000025373.15	Rnf41	chr10	protein_coding	ring finger protein 41
chr10	128264572;128268186	128268066;128272337	+	128264572	128272337	cassetteExon	0.5	100	100	ENSMUST00000217826.2	ENSMUSG00000025373.15	Rnf41	chr10	protein_coding	ring finger protein 41
chr10	128299642	128299736	+	128299642	128326227	A3SS	0.5	50	50	ENSMUST00000218228.2	ENSMUSG00000025369.16	Smarcc2	chr10	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
chr10	128295664	128297221	+	128295306	128297221	A5SS	0.5	50	50	ENSMUST00000218228.2	ENSMUSG00000025369.16	Smarcc2	chr10	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
chr10	128316873;128317643	128317551;128317952	+	128316873	128317952	cassetteExon	0.5	100	100	ENSMUST00000026433.9	ENSMUSG00000025369.16	Smarcc2	chr10	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
chr10	128324228	128324765	+	128323886	128324765	A5SS	0.5	50	50	ENSMUST00000026433.9	ENSMUSG00000025369.16	Smarcc2	chr10	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
chr10	128316873	128317952	+	128316873	128317551	3pMXE	0.5	50	50	ENSMUST00000217751.2	ENSMUSG00000025369.16	Smarcc2	chr10	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
chr10	128328271	128329408	-	128328271;128328614	128328471;128329408	ES	0.16	50	50	ENSMUST00000164181.2	ENSMUSG00000090841.3	Myl6	chr10	protein_coding	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
chr10	128329435	128329869	-	128329435	128329678	5pMXE	0.5	50	50	ENSMUST00000164181.2	ENSMUSG00000090841.3	Myl6	chr10	protein_coding	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
chr10	128326902;128327216	128327155;128327928	-	128326902	128327928	cassetteExon	0.5	100	100	ENSMUST00000164181.2	ENSMUSG00000090841.3	Myl6	chr10	protein_coding	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
chr10	128326902;128327216	128327159;128327928	-	128326902	128327928	cassetteExon	0.5	100	100	ENSMUST00000164181.2	ENSMUSG00000090841.3	Myl6	chr10	protein_coding	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
chr10	128326902;128327633	128327155;128327928	-	128326902	128327928	cassetteExon	0.5	100	100	ENSMUST00000164181.2	ENSMUSG00000090841.3	Myl6	chr10	protein_coding	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
chr10	128326902;128327633	128327159;128327928	-	128326902	128327928	cassetteExon	0.5	100	100	ENSMUST00000164181.2	ENSMUSG00000090841.3	Myl6	chr10	protein_coding	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
chr10	128326902;128327633	128327589;128327928	-	128326902	128327928	cassetteExon	0.5	100	100	ENSMUST00000164181.2	ENSMUSG00000090841.3	Myl6	chr10	protein_coding	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
chr10	128328614;128328914	128328808;128329408	-	128328614	128329408	cassetteExon	0.5	100	100	ENSMUST00000164181.2	ENSMUSG00000090841.3	Myl6	chr10	protein_coding	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
chr10	128328614;128329222	128328808;128329408	-	128328614	128329408	cassetteExon	0.5	100	100	ENSMUST00000164181.2	ENSMUSG00000090841.3	Myl6	chr10	protein_coding	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
chr10	128328404	128329408	-	128328614	128329408	A3SS&ES	0.16	50	50	ENSMUST00000164181.2	ENSMUSG00000090841.3	Myl6	chr10	protein_coding	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
chr10	128328578	128329408	-	128328614	128329408	A3SS	0.16	50	50	ENSMUST00000164181.2	ENSMUSG00000090841.3	Myl6	chr10	protein_coding	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
chr10	128328404	128329408	-	128328404	128328808	5pMXE	0.5	50	50	ENSMUST00000219655.2	ENSMUSG00000090841.3	Myl6	chr10	protein_coding	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
chr10	128328614	128328808	-	128328404	128328808	A3SS	0.5	50	50	ENSMUST00000219655.2	ENSMUSG00000090841.3	Myl6	chr10	protein_coding	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
chr10	128326902;128327216	128327155;128327928	-	128326902;128327633	128327589;128327928	MXE	0.5	100	100	ENSMUST00000218127.2	ENSMUSG00000090841.3	Myl6	chr10	protein_coding	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
chr10	128326902;128327216	128327159;128327928	-	128326902;128327633	128327589;128327928	MXE	0.5	100	100	ENSMUST00000218127.2	ENSMUSG00000090841.3	Myl6	chr10	protein_coding	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
chr10	128326902	128327155	-	128326902	128327159	A5SS	0.25	50	50	ENSMUST00000219236.2	ENSMUSG00000090841.3	Myl6	chr10	protein_coding	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
chr10	128328271	128329408	-	128328271;128328578	128328471;128329408	ES	0.16	50	50	ENSMUST00000217969.2	ENSMUSG00000090841.3	Myl6	chr10	protein_coding	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
chr10	128328404	128329408	-	128328578	128329408	A3SS&ES	0.16	50	50	ENSMUST00000217969.2	ENSMUSG00000090841.3	Myl6	chr10	protein_coding	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
chr10	128328914	128329408	-	128328578	128329408	A3SS	0.16	50	50	ENSMUST00000217969.2	ENSMUSG00000090841.3	Myl6	chr10	protein_coding	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
chr10	128329222	128329408	-	128328578	128329408	A3SS	0.16	50	50	ENSMUST00000217969.2	ENSMUSG00000090841.3	Myl6	chr10	protein_coding	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
chr10	128328404;128328914	128328808;128329408	-	128328404	128329408	cassetteExon	0.5	100	100	ENSMUST00000220307.2	ENSMUSG00000090841.3	Myl6	chr10	protein_coding	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
chr10	128328404;128329222	128328808;128329408	-	128328404	128329408	cassetteExon	0.5	100	100	ENSMUST00000220307.2	ENSMUSG00000090841.3	Myl6	chr10	protein_coding	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
chr10	128328271	128329408	-	128328404	128329408	A3SS	0.16	50	50	ENSMUST00000220307.2	ENSMUSG00000090841.3	Myl6	chr10	protein_coding	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
chr10	128328271;128328914	128328471;128329408	-	128328271	128329408	cassetteExon	0.5	100	100	ENSMUST00000218713.2	ENSMUSG00000090841.3	Myl6	chr10	protein_coding	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
chr10	128329222	128329408	-	128328271	128329408	A3SS	0.16	50	50	ENSMUST00000218713.2	ENSMUSG00000090841.3	Myl6	chr10	protein_coding	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
chr10	128328914;128329222	128329203;128329408	-	128328914	128329408	cassetteExon	0.5	100	100	ENSMUST00000220427.2	ENSMUSG00000090841.3	Myl6	chr10	protein_coding	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
chr10	128328404	128329408	-	128328914	128329408	A3SS&ES	0.16	50	50	ENSMUST00000220427.2	ENSMUSG00000090841.3	Myl6	chr10	protein_coding	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
chr10	128328404	128329408	-	128329222	128329408	A3SS&ES	0.16	50	50	ENSMUST00000219100.2	ENSMUSG00000090841.3	Myl6	chr10	protein_coding	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
chr10	128328271	128329408	-	128328614	128329408	A3SS	0.16	50	50	ENSMUST00000217913.2	ENSMUSG00000090841.3	Myl6	chr10	protein_coding	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
chr10	128349564	128351555	-	128348333	128351555	A3SS	0.5	50	50	ENSMUST00000026427.8	ENSMUSG00000025366.9	Esyt1	chr10	protein_coding	extended synaptotagmin-like protein 1
chr10	128381407;128381903	128381710;128382697	-	128381407	128382697	cassetteExon	0.5	100	100	ENSMUST00000040572.10	ENSMUSG00000039810.12	Zc3h10	chr10	protein_coding	zinc finger CCCH type containing 10
chr10	128382760;128383113	128383040;128383563	-	128382760	128383563	cassetteExon	0.5	100	100	ENSMUST00000040572.10	ENSMUSG00000039810.12	Zc3h10	chr10	protein_coding	zinc finger CCCH type containing 10
chr10	128382760	128383563	-	128382760	128383040	5pMXE	0.5	50	50	ENSMUST00000152539.8	ENSMUSG00000039810.12	Zc3h10	chr10	protein_coding	zinc finger CCCH type containing 10
chr10	128384320	128384527	-	128384298	128384527	A3SS	0.5	50	50	ENSMUST00000177163.8	ENSMUSG00000093674.8	Rpl41	chr10	protein_coding	ribosomal protein L41
chr10	128384842	128384957	-	128384840	128384957	A3SS	0.5	50	50	ENSMUST00000176683.8	ENSMUSG00000093674.8	Rpl41	chr10	protein_coding	ribosomal protein L41
chr10	128478602	128481590	-	128478602;128479837	128479744;128481590	ES	0.25	50	50	ENSMUST00000133342.10	ENSMUSG00000002578.19	Ikzf4	chr10	protein_coding	IKAROS family zinc finger 4
chr10	128478602;128479634	128479563;128479744	-	128478602	128479744	cassetteExon	0.5	100	100	ENSMUST00000133342.10	ENSMUSG00000002578.19	Ikzf4	chr10	protein_coding	IKAROS family zinc finger 4
chr10	128477168	128478498	-	128477182	128478498	A3SS	0.5	50	50	ENSMUST00000133342.10	ENSMUSG00000002578.19	Ikzf4	chr10	protein_coding	IKAROS family zinc finger 4
chr10	128478662	128481590	-	128479837	128481590	A3SS&ES	0.25	50	50	ENSMUST00000133342.10	ENSMUSG00000002578.19	Ikzf4	chr10	protein_coding	IKAROS family zinc finger 4
chr10	128480550	128481590	-	128479837	128481590	A3SS	0.25	50	50	ENSMUST00000133342.10	ENSMUSG00000002578.19	Ikzf4	chr10	protein_coding	IKAROS family zinc finger 4
chr10	128487172;128495790	128495713;128504892	-	128487172	128504892	cassetteExon	0.5	100	100	ENSMUST00000238610.2	ENSMUSG00000002578.19	Ikzf4	chr10	protein_coding	IKAROS family zinc finger 4
chr10	128478602	128479563	-	128478602	128487121	A5SS	0.25	50	50	ENSMUST00000238610.2	ENSMUSG00000002578.19	Ikzf4	chr10	protein_coding	IKAROS family zinc finger 4
chr10	128478602	128479744	-	128478602	128487121	A5SS	0.25	50	50	ENSMUST00000238610.2	ENSMUSG00000002578.19	Ikzf4	chr10	protein_coding	IKAROS family zinc finger 4
chr10	128478602	128481590	-	128478602	128487121	A5SS	0.25	50	50	ENSMUST00000238610.2	ENSMUSG00000002578.19	Ikzf4	chr10	protein_coding	IKAROS family zinc finger 4
chr10	128478602	128481590	-	128478602	128479744	5pMXE	0.25	50	50	ENSMUST00000222067.2	ENSMUSG00000002578.19	Ikzf4	chr10	protein_coding	IKAROS family zinc finger 4
chr10	128478602;128479837	128479563;128481590	-	128478602	128481590	cassetteExon	0.5	100	100	ENSMUST00000222901.2	ENSMUSG00000002578.19	Ikzf4	chr10	protein_coding	IKAROS family zinc finger 4
chr10	128478662	128481590	-	128478602	128481590	A3SS	0.25	50	50	ENSMUST00000222901.2	ENSMUSG00000002578.19	Ikzf4	chr10	protein_coding	IKAROS family zinc finger 4
chr10	128480550	128481590	-	128478602	128481590	A3SS	0.25	50	50	ENSMUST00000222901.2	ENSMUSG00000002578.19	Ikzf4	chr10	protein_coding	IKAROS family zinc finger 4
chr10	128480550	128481590	-	128478662	128481590	A3SS	0.25	50	50	ENSMUST00000223145.2	ENSMUSG00000002578.19	Ikzf4	chr10	protein_coding	IKAROS family zinc finger 4
chr10	128535544;128535988	128535845;128537212	-	128535544	128537212	cassetteExon	0.5	100	100	ENSMUST00000026415.9	ENSMUSG00000025358.17	Cdk2	chr10	protein_coding	cyclin-dependent kinase 2
chr10	128539872	128540357	-	128539872	128540581	A5SS	0.5	50	50	ENSMUST00000026415.9	ENSMUSG00000025358.17	Cdk2	chr10	protein_coding	cyclin-dependent kinase 2
chr10	128541153	128542105	+	128540097	128542105	A5SS	0.5	50	50	ENSMUST00000217836.2	ENSMUSG00000025359.11	Pmel	chr10	protein_coding	premelanosome protein
chr10	128567056	128568852	-	128567056;128567281	128567193;128568852	ES	0.5	50	50	ENSMUST00000026414.9	ENSMUSG00000025357.9	Dgka	chr10	protein_coding	diacylglycerol kinase, alpha
chr10	128584435	128601016	+	128583867	128601016	A5SS	0.33	50	50	ENSMUST00000163377.10	ENSMUSG00000064030.16	Pym1	chr10	protein_coding	PYM homolog 1, exon junction complex associated factor
chr10	128586206	128601016	+	128583867	128601016	A5SS	0.33	50	50	ENSMUST00000163377.10	ENSMUSG00000064030.16	Pym1	chr10	protein_coding	PYM homolog 1, exon junction complex associated factor
chr10	128584435;128586206	128586152;128601016	+	128584435	128601016	cassetteExon	0.5	100	100	ENSMUST00000065210.10	ENSMUSG00000064030.16	Pym1	chr10	protein_coding	PYM homolog 1, exon junction complex associated factor
chr10	128637098	128637220	-	128626990	128637220	A3SS	0.5	50	50	ENSMUST00000219535.2	ENSMUSG00000112429.2	Gm47093	chr10	lncRNA	predicted gene, 47093
chr10	128627013	128627454	+	128626835	128627454	A5SS	0.5	50	50	ENSMUST00000219404.2	ENSMUSG00000025355.8	Mmp19	chr10	protein_coding	matrix metallopeptidase 19
chr10	128637380	128638274	-	128637380	128637805	A5SS	0.5	50	50	ENSMUST00000051011.14	ENSMUSG00000047090.14	Tmem198b	chr10	protein_coding	transmembrane protein 198b
chr10	128639226	128639446	-	128639226	128640102	A5SS	0.5	50	50	ENSMUST00000051011.14	ENSMUSG00000047090.14	Tmem198b	chr10	protein_coding	transmembrane protein 198b
chr10	128641552	128642037	+	128640249	128642037	A5SS	0.2	50	50	ENSMUST00000218001.2	ENSMUSG00000025354.6	Dnajc14	chr10	protein_coding	DnaJ heat shock protein family (Hsp40) member C14
chr10	128641583	128642037	+	128640249	128642037	A5SS	0.2	50	50	ENSMUST00000218001.2	ENSMUSG00000025354.6	Dnajc14	chr10	protein_coding	DnaJ heat shock protein family (Hsp40) member C14
chr10	128641595	128642037	+	128640249	128642037	A5SS	0.2	50	50	ENSMUST00000218001.2	ENSMUSG00000025354.6	Dnajc14	chr10	protein_coding	DnaJ heat shock protein family (Hsp40) member C14
chr10	128641884	128642037	+	128640249	128642037	A5SS	0.2	50	50	ENSMUST00000218001.2	ENSMUSG00000025354.6	Dnajc14	chr10	protein_coding	DnaJ heat shock protein family (Hsp40) member C14
chr10	128643489	128645896	+	128643489	128649907	A3SS	0.5	50	50	ENSMUST00000217745.2	ENSMUSG00000025354.6	Dnajc14	chr10	protein_coding	DnaJ heat shock protein family (Hsp40) member C14
chr10	128641583	128642037	+	128641552	128642037	A5SS	0.2	50	50	ENSMUST00000217745.2	ENSMUSG00000025354.6	Dnajc14	chr10	protein_coding	DnaJ heat shock protein family (Hsp40) member C14
chr10	128641595	128642037	+	128641552	128642037	A5SS	0.2	50	50	ENSMUST00000217745.2	ENSMUSG00000025354.6	Dnajc14	chr10	protein_coding	DnaJ heat shock protein family (Hsp40) member C14
chr10	128641884	128642037	+	128641552	128642037	A5SS	0.2	50	50	ENSMUST00000217745.2	ENSMUSG00000025354.6	Dnajc14	chr10	protein_coding	DnaJ heat shock protein family (Hsp40) member C14
chr10	128641583	128642037	+	128641595	128642037	A5SS	0.2	50	50	ENSMUST00000219508.2	ENSMUSG00000025354.6	Dnajc14	chr10	protein_coding	DnaJ heat shock protein family (Hsp40) member C14
chr10	128641884	128642037	+	128641595	128642037	A5SS	0.2	50	50	ENSMUST00000219508.2	ENSMUSG00000025354.6	Dnajc14	chr10	protein_coding	DnaJ heat shock protein family (Hsp40) member C14
chr10	128641884	128642037	+	128641583	128642037	A5SS	0.2	50	50	ENSMUST00000026410.2	ENSMUSG00000025354.6	Dnajc14	chr10	protein_coding	DnaJ heat shock protein family (Hsp40) member C14
chr10	128669280	128674316	+	128669280	128674313	A3SS	0.5	50	50	ENSMUST00000218622.2	ENSMUSG00000078427.4	Sarnp	chr10	protein_coding	SAP domain containing ribonucleoprotein
chr10	128657840	128669181	+	128653256	128669181	A5SS	0.33	50	50	ENSMUST00000218622.2	ENSMUSG00000078427.4	Sarnp	chr10	protein_coding	SAP domain containing ribonucleoprotein
chr10	128666853	128669181	+	128653256	128669181	A5SS	0.33	50	50	ENSMUST00000218622.2	ENSMUSG00000078427.4	Sarnp	chr10	protein_coding	SAP domain containing ribonucleoprotein
chr10	128657840;128666853	128666820;128669181	+	128657840	128669181	cassetteExon	0.5	100	100	ENSMUST00000105230.4	ENSMUSG00000078427.4	Sarnp	chr10	protein_coding	SAP domain containing ribonucleoprotein
chr10	128687051;128687801	128687607;128689052	+	128687051	128689052	cassetteExon	0.5	100	100	ENSMUST00000105230.4	ENSMUSG00000078427.4	Sarnp	chr10	protein_coding	SAP domain containing ribonucleoprotein
chr10	128655974	128657411	-	128655974;128656383	128656130;128657411	ES	0.25	50	50	ENSMUST00000026409.5	ENSMUSG00000025353.6	Ormdl2	chr10	protein_coding	ORM1-like 2 (S. cerevisiae)
chr10	128656304	128657411	-	128656383	128657411	A3SS	0.25	50	50	ENSMUST00000026409.5	ENSMUSG00000025353.6	Ormdl2	chr10	protein_coding	ORM1-like 2 (S. cerevisiae)
chr10	128656429	128657411	-	128656383	128657411	A3SS	0.25	50	50	ENSMUST00000026409.5	ENSMUSG00000025353.6	Ormdl2	chr10	protein_coding	ORM1-like 2 (S. cerevisiae)
chr10	128655974	128657411	-	128655974;128656429	128656130;128657411	ES	0.25	50	50	ENSMUST00000219215.2	ENSMUSG00000025353.6	Ormdl2	chr10	protein_coding	ORM1-like 2 (S. cerevisiae)
chr10	128656304	128657411	-	128656429	128657411	A3SS	0.25	50	50	ENSMUST00000219215.2	ENSMUSG00000025353.6	Ormdl2	chr10	protein_coding	ORM1-like 2 (S. cerevisiae)
chr10	128655974;128656304	128656130;128657411	-	128655974	128657411	cassetteExon	0.5	100	100	ENSMUST00000217685.2	ENSMUSG00000025353.6	Ormdl2	chr10	protein_coding	ORM1-like 2 (S. cerevisiae)
chr10	128745391	128746264	+	128744921	128746264	A5SS	0.33	50	50	ENSMUST00000219317.2	ENSMUSG00000025351.15	Cd63	chr10	protein_coding	CD63 antigen
chr10	128745827	128746264	+	128744921	128746264	A5SS	0.33	50	50	ENSMUST00000219317.2	ENSMUSG00000025351.15	Cd63	chr10	protein_coding	CD63 antigen
chr10	128746644	128747321	+	128746340	128747321	A5SS	0.5	50	50	ENSMUST00000219317.2	ENSMUSG00000025351.15	Cd63	chr10	protein_coding	CD63 antigen
chr10	128745827	128746264	+	128745391	128746264	A5SS	0.33	50	50	ENSMUST00000220308.2	ENSMUSG00000025351.15	Cd63	chr10	protein_coding	CD63 antigen
chr10	128754461	128755817	-	128754461	128755016	5pMXE	0.5	50	50	ENSMUST00000026406.14	ENSMUSG00000025350.16	Rdh5	chr10	protein_coding	retinol dehydrogenase 5
chr10	128749811	128750004	-	128749805	128750004	A3SS	0.5	50	50	ENSMUST00000026406.14	ENSMUSG00000025350.16	Rdh5	chr10	protein_coding	retinol dehydrogenase 5
chr10	128754281	128755016	-	128754461	128755016	A3SS	0.5	50	50	ENSMUST00000026406.14	ENSMUSG00000025350.16	Rdh5	chr10	protein_coding	retinol dehydrogenase 5
chr10	128754007	128756428	-	128754007	128754122	5pMXE	0.5	50	50	ENSMUST00000145616.2	ENSMUSG00000025350.16	Rdh5	chr10	protein_coding	retinol dehydrogenase 5
chr10	128758595	128759797	-	128758595	128759244	5pMXE	0.5	50	50	ENSMUST00000153731.8	ENSMUSG00000090247.8	Bloc1s1	chr10	protein_coding	biogenesis of lysosomal organelles complex-1, subunit 1
chr10	128755976	128756428	-	128754007	128756428	A3SS	0.5	50	50	ENSMUST00000153731.8	ENSMUSG00000090247.8	Bloc1s1	chr10	protein_coding	biogenesis of lysosomal organelles complex-1, subunit 1
chr10	128776806;128777445	128777314;128778677	+	128776806;128777810	128777691;128778677	MXE	0.5	100	100	ENSMUST00000099112.4	ENSMUSG00000025348.10	Itga7	chr10	protein_coding	integrin alpha 7
chr10	128789940;128792592	128792480;128793490	+	128789940	128793490	cassetteExon	0.5	100	100	ENSMUST00000099112.4	ENSMUSG00000025348.10	Itga7	chr10	protein_coding	integrin alpha 7
chr10	128931461	128934980	-	128932165	128934980	A3SS	0.5	50	50	ENSMUST00000216681.2	ENSMUSG00000050198.5	Olfr768	chr10	protein_coding	olfactory receptor 768
chr10	128948508	128951171	-	128948326	128951171	A3SS	0.5	50	50	ENSMUST00000215453.2	ENSMUSG00000042801.6	Olfr769	chr10	protein_coding	olfactory receptor 769
chr10	128969662	128973757	-	128969662	128973957	A5SS	0.5	50	50	ENSMUST00000203887.3	ENSMUSG00000047868.7	Olfr770	chr10	protein_coding	olfactory receptor 770
chr10	128974088	128974649	-	128974088	128974520	A5SS	0.5	50	50	ENSMUST00000203887.3	ENSMUSG00000047868.7	Olfr770	chr10	protein_coding	olfactory receptor 770
chr10	129321132;129322427	129322234;129322689	+	129321132	129322689	cassetteExon	0.5	100	100	ENSMUST00000213236.2	ENSMUSG00000111273.2	Olfr789	chr10	protein_coding	olfactory receptor 789
chr10	129334717	129336752	+	129334502	129336752	A5SS	0.5	50	50	ENSMUST00000203966.3	ENSMUSG00000044025.7	Olfr790	chr10	protein_coding	olfactory receptor 790
chr10	129473643	129477999	+	129473643;129474614	129474548;129477999	ES	0.5	50	50	ENSMUST00000214182.2	ENSMUSG00000094734.3	Olfr799	chr10	protein_coding	olfactory receptor 799
chr10	129474614	129482974	+	129474614;129478112	129477999;129482974	ES	0.33	50	50	ENSMUST00000214182.2	ENSMUSG00000094734.3	Olfr799	chr10	protein_coding	olfactory receptor 799
chr10	129473643	129482974	+	129473643;129474614	129474548;129482974	ES	0.33	50	50	ENSMUST00000217364.2	ENSMUSG00000094734.3	Olfr799	chr10	protein_coding	olfactory receptor 799
chr10	129473643;129478112	129477999;129482974	+	129473643;129474614	129474548;129482974	MXE	0.5	100	100	ENSMUST00000217364.2	ENSMUSG00000094734.3	Olfr799	chr10	protein_coding	olfactory receptor 799
chr10	129473643;129478112	129477999;129482974	+	129473643	129482974	cassetteExon	0.5	100	100	ENSMUST00000216446.2	ENSMUSG00000094734.3	Olfr799	chr10	protein_coding	olfactory receptor 799
chr10	129508373	129509709	-	129508373	129509415	5pMXE	0.33	50	50	ENSMUST00000213294.2	ENSMUSG00000058513.8	Olfr801	chr10	protein_coding	olfactory receptor 801
chr10	129506279	129508125	-	129506408	129508125	A3SS	0.5	50	50	ENSMUST00000213294.2	ENSMUSG00000058513.8	Olfr801	chr10	protein_coding	olfactory receptor 801
chr10	129508373	129509493	-	129508373	129509415	A5SS	0.33	50	50	ENSMUST00000213294.2	ENSMUSG00000058513.8	Olfr801	chr10	protein_coding	olfactory receptor 801
chr10	129508373	129509709	-	129508373	129509493	5pMXE	0.33	50	50	ENSMUST00000216067.3	ENSMUSG00000058513.8	Olfr801	chr10	protein_coding	olfactory receptor 801
chr10	129518650	129523841	-	129518650;129522124	129521877;129523841	ES	0.5	50	50	ENSMUST00000203785.3	ENSMUSG00000093866.4	Olfr802	chr10	protein_coding	olfactory receptor 802
chr10	129539425	129541068	+	129539425	129540498	A3SS	0.5	50	50	ENSMUST00000213331.2	ENSMUSG00000095401.3	Olfr804	chr10	protein_coding	olfactory receptor 804
chr10	129559432;129559659	129559559;129562912	-	129559432	129562912	cassetteExon	0.5	100	100	ENSMUST00000216794.2	ENSMUSG00000096858.5	Olfr805	chr10	protein_coding	olfactory receptor 805
chr10	129563040	129565141	-	129563040	129563157	A5SS&ES	0.5	50	50	ENSMUST00000216794.2	ENSMUSG00000096858.5	Olfr805	chr10	protein_coding	olfactory receptor 805
chr10	129574806	129577659	-	129574806	129577434	A5SS	0.5	50	50	ENSMUST00000213239.2	ENSMUSG00000071065.7	Olfr806	chr10	protein_coding	olfactory receptor 806
chr10	129591407	129593322	-	129591407	129593194	A5SS	0.5	50	50	ENSMUST00000213379.2	ENSMUSG00000050478.4	Olfr807	chr10	protein_coding	olfactory receptor 807
chr10	129627481;129628957	129628827;129629303	-	129627481	129629303	cassetteExon	0.5	100	100	ENSMUST00000217283.2	ENSMUSG00000069421.5	Olfr810	chr10	protein_coding	olfactory receptor 810
chr10	129629413	129630544	-	129629413	129630644	A5SS	0.5	50	50	ENSMUST00000217283.2	ENSMUSG00000069421.5	Olfr810	chr10	protein_coding	olfactory receptor 810
chr10	129638076	129640000	-	129638759	129640000	A3SS	0.33	50	50	ENSMUST00000215058.2	ENSMUSG00000063173.3	Olfr811	chr10	protein_coding	olfactory receptor 811
chr10	129638616	129640000	-	129638759	129640000	A3SS	0.33	50	50	ENSMUST00000215058.2	ENSMUSG00000063173.3	Olfr811	chr10	protein_coding	olfactory receptor 811
chr10	129638616	129640000	-	129638076	129640000	A3SS	0.33	50	50	ENSMUST00000216283.2	ENSMUSG00000063173.3	Olfr811	chr10	protein_coding	olfactory receptor 811
chr10	129681558	129681731	-	129681558	129681944	A5SS	0.5	50	50	ENSMUST00000205013.3	ENSMUSG00000049052.5	Olfr812	chr10	protein_coding	olfactory receptor 812
chr10	129712408	129715316	-	129712429	129715316	A3SS	0.5	50	50	ENSMUST00000216966.2	ENSMUSG00000059134.3	Olfr814	chr10	protein_coding	olfactory receptor 814
chr10	129749520	129751431	-	129749520	129751197	5pMXE	0.5	50	50	ENSMUST00000213618.2	ENSMUSG00000063715.3	Olfr816	chr10	protein_coding	olfactory receptor 816
chr10	129748170	129749390	-	129748038	129749390	A3SS	0.5	50	50	ENSMUST00000213618.2	ENSMUSG00000063715.3	Olfr816	chr10	protein_coding	olfactory receptor 816
chr10	129781613	129784794	-	129781950	129784794	A3SS	0.5	50	50	ENSMUST00000215527.2	ENSMUSG00000058071.5	Olfr818	chr10	protein_coding	olfactory receptor 818
chr10	129848562	129853226	+	129848562	129852528	A3SS	0.5	50	50	ENSMUST00000214917.2	ENSMUSG00000048745.4	Olfr820	chr10	protein_coding	olfactory receptor 820
chr10	129866684	129869480	+	129866684;129867468	129867405;129869480	ES	0.5	50	50	ENSMUST00000205181.3	ENSMUSG00000044897.4	Olfr821	chr10	protein_coding	olfactory receptor 821
chr10	129962937	129965607	-	129962937	129965733	A5SS	0.5	50	50	ENSMUST00000215217.2	ENSMUSG00000095804.3	Olfr824	chr10	protein_coding	olfactory receptor 824
chr10	129999202	130002120	-	129998994	130002120	A3SS	0.5	50	50	ENSMUST00000216434.2	ENSMUSG00000058084.6	Olfr825	chr10	protein_coding	olfactory receptor 825
chr10	130046771	130049747	-	130047009	130049747	A3SS	0.5	50	50	ENSMUST00000213568.2	ENSMUSG00000045559.7	Olfr827	chr10	protein_coding	olfactory receptor 827
chr10	130158838	130183013	+	130158838;130167022	130166851;130183013	ES	0.5	50	50	ENSMUST00000217702.2	ENSMUSG00000034833.11	Tespa1	chr10	protein_coding	thymocyte expressed, positive selection associated 1
chr10	130158838;130164618	130164530;130166851	+	130158838	130166851	cassetteExon	0.5	100	100	ENSMUST00000217702.2	ENSMUSG00000034833.11	Tespa1	chr10	protein_coding	thymocyte expressed, positive selection associated 1
chr10	130196724	130197641	+	130196724	130199849	A3SS	0.5	50	50	ENSMUST00000217702.2	ENSMUSG00000034833.11	Tespa1	chr10	protein_coding	thymocyte expressed, positive selection associated 1
chr10	130158838	130164530	+	130158838	130183013	A3SS	0.33	50	50	ENSMUST00000042586.10	ENSMUSG00000034833.11	Tespa1	chr10	protein_coding	thymocyte expressed, positive selection associated 1
chr10	130225044	130226544	-	130225215	130226544	A3SS	0.5	50	50	ENSMUST00000094502.6	ENSMUSG00000070601.6	Vmn2r84	chr10	protein_coding	vomeronasal 2, receptor 84
chr10	130227807	130229905	-	130228028	130229905	A3SS	0.5	50	50	ENSMUST00000094502.6	ENSMUSG00000070601.6	Vmn2r84	chr10	protein_coding	vomeronasal 2, receptor 84
chr11	3076058;3077219	3077131;3077479	+	3076058	3077479	cassetteExon	0.5	100	100	ENSMUST00000145164.8	ENSMUSG00000082286.12	Pisd-ps1	chr11	transcribed_unprocessed_pseudogene	phosphatidylserine decarboxylase, pseudogene 1
chr11	3076178	3077479	+	3076058	3077479	A5SS	0.33	50	50	ENSMUST00000145164.8	ENSMUSG00000082286.12	Pisd-ps1	chr11	transcribed_unprocessed_pseudogene	phosphatidylserine decarboxylase, pseudogene 1
chr11	3076178	3077479	+	3077219	3077479	A5SS&ES	0.33	50	50	ENSMUST00000132408.8	ENSMUSG00000082286.12	Pisd-ps1	chr11	transcribed_unprocessed_pseudogene	phosphatidylserine decarboxylase, pseudogene 1
chr11	3093336	3094217	-	3093336;3093790	3093695;3094217	ES	0.5	50	50	ENSMUST00000101655.10	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3094970	3096162	-	3094970;3095322	3095241;3096162	ES	0.5	50	50	ENSMUST00000101655.10	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3095322	3103432	-	3095322;3096292	3096162;3103432	ES	0.5	50	50	ENSMUST00000101655.10	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3105496	3107866	-	3105496;3106864	3106772;3107866	ES	0.5	50	50	ENSMUST00000101655.10	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3114713	3120587	-	3114713;3115678	3115576;3120587	ES	0.33	50	50	ENSMUST00000101655.10	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3127521	3136065	-	3127521;3129507	3129397;3136065	ES	0.33	50	50	ENSMUST00000101655.10	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3106864;3115321	3115254;3115576	-	3106864;3114713	3107866;3115576	MXE	0.5	100	100	ENSMUST00000101655.10	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3110146;3115321	3115254;3115576	-	3110146;3114713	3114557;3115576	MXE	0.5	100	100	ENSMUST00000101655.10	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3135974	3136065	-	3129507	3136065	A3SS	0.33	50	50	ENSMUST00000101655.10	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3084501	3084626	-	3084501	3084659	A5SS	0.5	50	50	ENSMUST00000101655.10	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3120704	3126378	-	3120704	3127427	A5SS	0.5	50	50	ENSMUST00000101655.10	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3137410	3138878	-	3137410	3138941	A5SS	0.5	50	50	ENSMUST00000101655.10	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3139056	3202160	-	3139056	3143360	5pMXE	0.5	50	50	ENSMUST00000081318.13	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3137410	3138941	-	3129507	3138941	A3SS	0.5	50	50	ENSMUST00000140846.9	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3127521	3136065	-	3127521	3129397	A5SS&ES	0.5	50	50	ENSMUST00000140846.9	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3129507	3136065	-	3129507	3138941	A5SS	0.5	50	50	ENSMUST00000140846.9	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3094970;3096292	3096162;3103432	-	3094970;3095322	3095241;3103432	MXE	0.5	100	100	ENSMUST00000144778.8	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3094970;3096292	3096162;3114557	-	3094970;3110146	3095241;3114557	MXE	0.5	100	100	ENSMUST00000144778.8	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3095322;3096292	3096162;3114557	-	3095322;3110146	3103432;3114557	MXE	0.5	100	100	ENSMUST00000144778.8	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3110146	3115254	-	3110146	3114557	5pMXE	0.5	50	50	ENSMUST00000126746.9	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3094292	3094792	-	3090233	3094792	A3SS	0.5	50	50	ENSMUST00000126746.9	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3090233	3092308	-	3090233	3094792	A5SS	0.5	50	50	ENSMUST00000126746.9	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3096292;3114713	3114557;3120587	-	3096292;3103498	3103432;3120587	MXE	0.5	100	100	ENSMUST00000144359.8	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3103498;3114713	3114557;3120587	-	3103498	3120587	cassetteExon	0.5	100	100	ENSMUST00000144359.8	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3115678	3120587	-	3103498	3120587	A3SS	0.33	50	50	ENSMUST00000144359.8	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3103498	3105399	-	3103498	3120587	A5SS	0.33	50	50	ENSMUST00000144359.8	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3095322;3103498	3103432;3114557	-	3095322;3096292	3096162;3114557	MXE	0.5	100	100	ENSMUST00000132893.8	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3096292;3103498	3103432;3114557	-	3096292	3114557	cassetteExon	0.5	100	100	ENSMUST00000132893.8	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3095322;3103498	3103432;3120587	-	3095322;3115678	3096162;3120587	MXE	0.5	100	100	ENSMUST00000132893.8	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3096292;3103498	3103432;3120587	-	3096292;3115678	3114557;3120587	MXE	0.5	100	100	ENSMUST00000132893.8	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3110146	3114557	-	3096292	3114557	A3SS	0.33	50	50	ENSMUST00000132893.8	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3115321	3115576	-	3114713	3115576	A3SS	0.5	50	50	ENSMUST00000132893.8	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3110146	3114557	-	3103498	3114557	A3SS	0.33	50	50	ENSMUST00000138126.8	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3103498	3105399	-	3103498	3114557	A5SS	0.33	50	50	ENSMUST00000138126.8	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3095322	3103432	-	3095322	3096162	5pMXE	0.5	50	50	ENSMUST00000146888.2	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3096292	3114557	-	3103498	3114557	3pMXE	0.33	50	50	ENSMUST00000141422.8	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3110146	3115254	-	3106864	3115254	A3SS	0.5	50	50	ENSMUST00000156655.8	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3114713	3120587	-	3115678	3120587	A3SS&ES	0.5	50	50	ENSMUST00000156655.8	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3106864	3107866	-	3106864	3115254	A5SS	0.5	50	50	ENSMUST00000156655.8	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3110146;3114713	3114557;3120587	-	3110146;3115678	3115254;3120587	MXE	0.5	100	100	ENSMUST00000143442.2	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3135974	3136065	-	3127521	3136065	A3SS	0.33	50	50	ENSMUST00000155763.8	ENSMUSG00000023764.19	Sfi1	chr11	protein_coding	Sfi1 homolog, spindle assembly associated (yeast)
chr11	3200365	3202160	-	3139056	3202160	A3SS	0.5	50	50	ENSMUST00000159304.8	ENSMUSG00000020457.14	Drg1	chr11	protein_coding	developmentally regulated GTP binding protein 1
chr11	3209375	3214767	-	3209375;3212664	3212489;3214767	ES	0.5	50	50	ENSMUST00000020741.12	ENSMUSG00000020457.14	Drg1	chr11	protein_coding	developmentally regulated GTP binding protein 1
chr11	3212664	3216269	-	3212664;3214890	3214767;3216269	ES	0.5	50	50	ENSMUST00000020741.12	ENSMUSG00000020457.14	Drg1	chr11	protein_coding	developmentally regulated GTP binding protein 1
chr11	3209375	3214767	-	3209375	3212489	5pMXE	0.5	50	50	ENSMUST00000142605.8	ENSMUSG00000020457.14	Drg1	chr11	protein_coding	developmentally regulated GTP binding protein 1
chr11	3209375;3212664	3212489;3216269	-	3209375;3214890	3214767;3216269	MXE	0.5	100	100	ENSMUST00000166162.8	ENSMUSG00000020457.14	Drg1	chr11	protein_coding	developmentally regulated GTP binding protein 1
chr11	3180101;3184059	3183988;3184462	+	3180101	3184462	cassetteExon	0.5	100	100	ENSMUST00000020734.11	ENSMUSG00000020454.18	Eif4enif1	chr11	protein_coding	eukaryotic translation initiation factor 4E nuclear import factor 1
chr11	3177885	3179968	+	3177885	3179869	A3SS	0.5	50	50	ENSMUST00000020734.11	ENSMUSG00000020454.18	Eif4enif1	chr11	protein_coding	eukaryotic translation initiation factor 4E nuclear import factor 1
chr11	3152797	3153630	+	3152556	3153630	A5SS	0.2	50	50	ENSMUST00000020734.11	ENSMUSG00000020454.18	Eif4enif1	chr11	protein_coding	eukaryotic translation initiation factor 4E nuclear import factor 1
chr11	3152992	3153630	+	3152556	3153630	A5SS	0.2	50	50	ENSMUST00000020734.11	ENSMUSG00000020454.18	Eif4enif1	chr11	protein_coding	eukaryotic translation initiation factor 4E nuclear import factor 1
chr11	3153194	3153630	+	3152556	3153630	A5SS	0.2	50	50	ENSMUST00000020734.11	ENSMUSG00000020454.18	Eif4enif1	chr11	protein_coding	eukaryotic translation initiation factor 4E nuclear import factor 1
chr11	3153326	3153630	+	3152556	3153630	A5SS	0.2	50	50	ENSMUST00000020734.11	ENSMUSG00000020454.18	Eif4enif1	chr11	protein_coding	eukaryotic translation initiation factor 4E nuclear import factor 1
chr11	3165719	3174632	+	3165719	3170244	3pMXE	0.5	50	50	ENSMUST00000125224.8	ENSMUSG00000020454.18	Eif4enif1	chr11	protein_coding	eukaryotic translation initiation factor 4E nuclear import factor 1
chr11	3152992	3153630	+	3152797	3153630	A5SS	0.2	50	50	ENSMUST00000125224.8	ENSMUSG00000020454.18	Eif4enif1	chr11	protein_coding	eukaryotic translation initiation factor 4E nuclear import factor 1
chr11	3153194	3153630	+	3152797	3153630	A5SS	0.2	50	50	ENSMUST00000125224.8	ENSMUSG00000020454.18	Eif4enif1	chr11	protein_coding	eukaryotic translation initiation factor 4E nuclear import factor 1
chr11	3153326	3153630	+	3152797	3153630	A5SS	0.2	50	50	ENSMUST00000125224.8	ENSMUSG00000020454.18	Eif4enif1	chr11	protein_coding	eukaryotic translation initiation factor 4E nuclear import factor 1
chr11	3184059	3184585	+	3184059	3184462	A3SS	0.5	50	50	ENSMUST00000110049.8	ENSMUSG00000020454.18	Eif4enif1	chr11	protein_coding	eukaryotic translation initiation factor 4E nuclear import factor 1
chr11	3180065	3183988	+	3180101	3183988	A5SS	0.5	50	50	ENSMUST00000110049.8	ENSMUSG00000020454.18	Eif4enif1	chr11	protein_coding	eukaryotic translation initiation factor 4E nuclear import factor 1
chr11	3153194	3153630	+	3152992	3153630	A5SS	0.2	50	50	ENSMUST00000125637.8	ENSMUSG00000020454.18	Eif4enif1	chr11	protein_coding	eukaryotic translation initiation factor 4E nuclear import factor 1
chr11	3153326	3153630	+	3152992	3153630	A5SS	0.2	50	50	ENSMUST00000125637.8	ENSMUSG00000020454.18	Eif4enif1	chr11	protein_coding	eukaryotic translation initiation factor 4E nuclear import factor 1
chr11	3153326	3153630	+	3153194	3153630	A5SS	0.2	50	50	ENSMUST00000179770.8	ENSMUSG00000020454.18	Eif4enif1	chr11	protein_coding	eukaryotic translation initiation factor 4E nuclear import factor 1
chr11	3171294	3174632	+	3165719	3174632	A5SS	0.5	50	50	ENSMUST00000120721.9	ENSMUSG00000020454.18	Eif4enif1	chr11	protein_coding	eukaryotic translation initiation factor 4E nuclear import factor 1
chr11	3180101	3184462	+	3184059	3184462	A5SS&ES	0.5	50	50	ENSMUST00000120721.9	ENSMUSG00000020454.18	Eif4enif1	chr11	protein_coding	eukaryotic translation initiation factor 4E nuclear import factor 1
chr11	3180101	3184462	+	3180101	3183988	A3SS&ES	0.5	50	50	ENSMUST00000135223.2	ENSMUSG00000020454.18	Eif4enif1	chr11	protein_coding	eukaryotic translation initiation factor 4E nuclear import factor 1
chr11	3239347	3243280	+	3239347	3239869	3pMXE	0.5	50	50	ENSMUST00000142561.2	ENSMUSG00000020453.18	Patz1	chr11	protein_coding	POZ (BTB) and AT hook containing zinc finger 1
chr11	3243343;3244547	3244456;3249034	+	3243343	3249034	cassetteExon	0.5	100	100	ENSMUST00000101644.10	ENSMUSG00000020453.18	Patz1	chr11	protein_coding	POZ (BTB) and AT hook containing zinc finger 1
chr11	3249205;3256360	3256223;3257648	+	3249205	3257648	cassetteExon	0.5	100	100	ENSMUST00000101644.10	ENSMUSG00000020453.18	Patz1	chr11	protein_coding	POZ (BTB) and AT hook containing zinc finger 1
chr11	3249205;3256360	3256288;3257648	+	3249205	3257648	cassetteExon	0.5	100	100	ENSMUST00000101644.10	ENSMUSG00000020453.18	Patz1	chr11	protein_coding	POZ (BTB) and AT hook containing zinc finger 1
chr11	3241884	3243280	+	3239347	3243280	A5SS	0.25	50	50	ENSMUST00000101644.10	ENSMUSG00000020453.18	Patz1	chr11	protein_coding	POZ (BTB) and AT hook containing zinc finger 1
chr11	3242373	3243280	+	3239347	3243280	A5SS	0.25	50	50	ENSMUST00000101644.10	ENSMUSG00000020453.18	Patz1	chr11	protein_coding	POZ (BTB) and AT hook containing zinc finger 1
chr11	3243015	3243280	+	3239347	3243280	A5SS	0.25	50	50	ENSMUST00000101644.10	ENSMUSG00000020453.18	Patz1	chr11	protein_coding	POZ (BTB) and AT hook containing zinc finger 1
chr11	3248586	3249034	+	3243343	3249034	A5SS	0.33	50	50	ENSMUST00000101644.10	ENSMUSG00000020453.18	Patz1	chr11	protein_coding	POZ (BTB) and AT hook containing zinc finger 1
chr11	3243343	3249034	+	3243343	3244456	3pMXE	0.5	50	50	ENSMUST00000144396.8	ENSMUSG00000020453.18	Patz1	chr11	protein_coding	POZ (BTB) and AT hook containing zinc finger 1
chr11	3249205	3256223	+	3249205	3256288	A3SS	0.33	50	50	ENSMUST00000134089.8	ENSMUSG00000020453.18	Patz1	chr11	protein_coding	POZ (BTB) and AT hook containing zinc finger 1
chr11	3248586	3249034	+	3244547	3249034	A5SS	0.33	50	50	ENSMUST00000134089.8	ENSMUSG00000020453.18	Patz1	chr11	protein_coding	POZ (BTB) and AT hook containing zinc finger 1
chr11	3242373	3243280	+	3241884	3243280	A5SS	0.25	50	50	ENSMUST00000094471.10	ENSMUSG00000020453.18	Patz1	chr11	protein_coding	POZ (BTB) and AT hook containing zinc finger 1
chr11	3243015	3243280	+	3241884	3243280	A5SS	0.25	50	50	ENSMUST00000094471.10	ENSMUSG00000020453.18	Patz1	chr11	protein_coding	POZ (BTB) and AT hook containing zinc finger 1
chr11	3243015	3243280	+	3242373	3243280	A5SS	0.25	50	50	ENSMUST00000153603.8	ENSMUSG00000020453.18	Patz1	chr11	protein_coding	POZ (BTB) and AT hook containing zinc finger 1
chr11	3283583;3285831	3285719;3291523	+	3283583	3291523	cassetteExon	0.5	100	100	ENSMUST00000045153.11	ENSMUSG00000034614.15	Pik3ip1	chr11	protein_coding	phosphoinositide-3-kinase interacting protein 1
chr11	3282249	3283209	+	3282228	3283209	A5SS	0.33	50	50	ENSMUST00000045153.11	ENSMUSG00000034614.15	Pik3ip1	chr11	protein_coding	phosphoinositide-3-kinase interacting protein 1
chr11	3282614	3283209	+	3282228	3283209	A5SS	0.33	50	50	ENSMUST00000045153.11	ENSMUSG00000034614.15	Pik3ip1	chr11	protein_coding	phosphoinositide-3-kinase interacting protein 1
chr11	3284528	3291523	+	3283583	3291523	A5SS	0.33	50	50	ENSMUST00000045153.11	ENSMUSG00000034614.15	Pik3ip1	chr11	protein_coding	phosphoinositide-3-kinase interacting protein 1
chr11	3282614	3283209	+	3282249	3283209	A5SS	0.33	50	50	ENSMUST00000136536.8	ENSMUSG00000034614.15	Pik3ip1	chr11	protein_coding	phosphoinositide-3-kinase interacting protein 1
chr11	3284528	3291523	+	3285831	3291523	A5SS&ES	0.33	50	50	ENSMUST00000138907.8	ENSMUSG00000034614.15	Pik3ip1	chr11	protein_coding	phosphoinositide-3-kinase interacting protein 1
chr11	3305916	3306181	-	3305916	3306053	5pMXE	0.25	50	50	ENSMUST00000110029.9	ENSMUSG00000020451.18	Limk2	chr11	protein_coding	LIM motif-containing protein kinase 2
chr11	3305916	3307972	-	3305916	3306053	5pMXE	0.25	50	50	ENSMUST00000110029.9	ENSMUSG00000020451.18	Limk2	chr11	protein_coding	LIM motif-containing protein kinase 2
chr11	3305916	3308110	-	3305916	3306053	5pMXE	0.25	50	50	ENSMUST00000110029.9	ENSMUSG00000020451.18	Limk2	chr11	protein_coding	LIM motif-containing protein kinase 2
chr11	3302377;3302917	3302900;3303277	-	3302377	3303277	cassetteExon	0.5	100	100	ENSMUST00000110029.9	ENSMUSG00000020451.18	Limk2	chr11	protein_coding	LIM motif-containing protein kinase 2
chr11	3310586	3342917	-	3310586	3320969	5pMXE	0.2	50	50	ENSMUST00000101640.10	ENSMUSG00000020451.18	Limk2	chr11	protein_coding	LIM motif-containing protein kinase 2
chr11	3310586	3359046	-	3310586	3320969	5pMXE	0.2	50	50	ENSMUST00000101640.10	ENSMUSG00000020451.18	Limk2	chr11	protein_coding	LIM motif-containing protein kinase 2
chr11	3311825	3320969	-	3310586	3320969	A3SS	0.5	50	50	ENSMUST00000101640.10	ENSMUSG00000020451.18	Limk2	chr11	protein_coding	LIM motif-containing protein kinase 2
chr11	3305916	3306181	-	3305916	3308110	A5SS	0.25	50	50	ENSMUST00000101640.10	ENSMUSG00000020451.18	Limk2	chr11	protein_coding	LIM motif-containing protein kinase 2
chr11	3305916	3307972	-	3305916	3308110	A5SS	0.25	50	50	ENSMUST00000101640.10	ENSMUSG00000020451.18	Limk2	chr11	protein_coding	LIM motif-containing protein kinase 2
chr11	3310586	3311021	-	3310586	3320969	A5SS	0.2	50	50	ENSMUST00000101640.10	ENSMUSG00000020451.18	Limk2	chr11	protein_coding	LIM motif-containing protein kinase 2
chr11	3310586	3318983	-	3310586	3320969	A5SS	0.2	50	50	ENSMUST00000101640.10	ENSMUSG00000020451.18	Limk2	chr11	protein_coding	LIM motif-containing protein kinase 2
chr11	3305916	3306181	-	3305916	3307972	A5SS	0.25	50	50	ENSMUST00000134576.8	ENSMUSG00000020451.18	Limk2	chr11	protein_coding	LIM motif-containing protein kinase 2
chr11	3310586	3359046	-	3310586;3343016	3342917;3359046	ES	0.33	50	50	ENSMUST00000101638.4	ENSMUSG00000020451.18	Limk2	chr11	protein_coding	LIM motif-containing protein kinase 2
chr11	3347034	3359046	-	3343016	3359046	A3SS	0.33	50	50	ENSMUST00000101638.4	ENSMUSG00000020451.18	Limk2	chr11	protein_coding	LIM motif-containing protein kinase 2
chr11	3310586	3311021	-	3310586	3342917	A5SS	0.2	50	50	ENSMUST00000101638.4	ENSMUSG00000020451.18	Limk2	chr11	protein_coding	LIM motif-containing protein kinase 2
chr11	3310586	3318983	-	3310586	3342917	A5SS	0.2	50	50	ENSMUST00000101638.4	ENSMUSG00000020451.18	Limk2	chr11	protein_coding	LIM motif-containing protein kinase 2
chr11	3347034	3359046	-	3310586	3359046	A3SS	0.33	50	50	ENSMUST00000125832.8	ENSMUSG00000020451.18	Limk2	chr11	protein_coding	LIM motif-containing protein kinase 2
chr11	3310586	3311021	-	3310586	3359046	A5SS	0.2	50	50	ENSMUST00000125832.8	ENSMUSG00000020451.18	Limk2	chr11	protein_coding	LIM motif-containing protein kinase 2
chr11	3310586	3318983	-	3310586	3359046	A5SS	0.2	50	50	ENSMUST00000125832.8	ENSMUSG00000020451.18	Limk2	chr11	protein_coding	LIM motif-containing protein kinase 2
chr11	3310586	3311021	-	3310586	3318983	A5SS	0.2	50	50	ENSMUST00000148091.2	ENSMUSG00000020451.18	Limk2	chr11	protein_coding	LIM motif-containing protein kinase 2
chr11	3378902	3402209	-	3378902;3382620	3382400;3402209	ES	0.33	50	50	ENSMUST00000077078.12	ENSMUSG00000020448.17	Rnf185	chr11	protein_coding	ring finger protein 185
chr11	3382620;3388323	3388205;3402209	-	3382620	3402209	cassetteExon	0.5	100	100	ENSMUST00000077078.12	ENSMUSG00000020448.17	Rnf185	chr11	protein_coding	ring finger protein 185
chr11	3388323	3402209	-	3378902	3402209	A3SS	0.33	50	50	ENSMUST00000144055.2	ENSMUSG00000020448.17	Rnf185	chr11	protein_coding	ring finger protein 185
chr11	3402570	3406763	+	3402434	3406763	A5SS	0.33	50	50	ENSMUST00000136038.2	ENSMUSG00000034587.9	8430429K09Rik	chr11	lncRNA	RIKEN cDNA 8430429K09 gene
chr11	3402740	3406763	+	3402434	3406763	A5SS	0.33	50	50	ENSMUST00000136038.2	ENSMUSG00000034587.9	8430429K09Rik	chr11	lncRNA	RIKEN cDNA 8430429K09 gene
chr11	3402740	3421332	+	3402740	3406763	3pMXE	0.5	50	50	ENSMUST00000144844.2	ENSMUSG00000034587.9	8430429K09Rik	chr11	lncRNA	RIKEN cDNA 8430429K09 gene
chr11	3402570	3406763	+	3402740	3406763	A5SS	0.33	50	50	ENSMUST00000144844.2	ENSMUSG00000034587.9	8430429K09Rik	chr11	lncRNA	RIKEN cDNA 8430429K09 gene
chr11	3402570;3402740	3402644;3406763	+	3402570	3406763	cassetteExon	0.5	100	100	ENSMUST00000146456.2	ENSMUSG00000034587.9	8430429K09Rik	chr11	lncRNA	RIKEN cDNA 8430429K09 gene
chr11	3442242	3447933	+	3442242	3442970	3pMXE	0.5	50	50	ENSMUST00000064265.13	ENSMUSG00000034579.18	Pla2g3	chr11	protein_coding	phospholipase A2, group III
chr11	3444574	3445347	-	3445166	3445347	A3SS	0.33	50	50	ENSMUST00000044507.12	ENSMUSG00000034570.13	Inpp5j	chr11	protein_coding	inositol polyphosphate 5-phosphatase J
chr11	3445261	3445347	-	3445166	3445347	A3SS	0.33	50	50	ENSMUST00000044507.12	ENSMUSG00000034570.13	Inpp5j	chr11	protein_coding	inositol polyphosphate 5-phosphatase J
chr11	3451723	3454644	-	3453143	3454644	A3SS&ES	0.5	50	50	ENSMUST00000044507.12	ENSMUSG00000034570.13	Inpp5j	chr11	protein_coding	inositol polyphosphate 5-phosphatase J
chr11	3444574	3445347	-	3445261	3445347	A3SS	0.33	50	50	ENSMUST00000148939.8	ENSMUSG00000034570.13	Inpp5j	chr11	protein_coding	inositol polyphosphate 5-phosphatase J
chr11	3467827	3471817	-	3467827;3470916	3470752;3471817	ES	0.5	50	50	ENSMUST00000020718.10	ENSMUSG00000020439.18	Smtn	chr11	protein_coding	smoothelin
chr11	3476480	3479440	-	3476480	3477428	5pMXE	0.5	50	50	ENSMUST00000020718.10	ENSMUSG00000020439.18	Smtn	chr11	protein_coding	smoothelin
chr11	3474726;3475206	3474883;3476165	-	3474726	3476165	cassetteExon	0.5	100	100	ENSMUST00000020718.10	ENSMUSG00000020439.18	Smtn	chr11	protein_coding	smoothelin
chr11	3467827	3470848	-	3467827	3470752	A5SS	0.33	50	50	ENSMUST00000020718.10	ENSMUSG00000020439.18	Smtn	chr11	protein_coding	smoothelin
chr11	3467827	3471817	-	3467827;3470916	3470848;3471817	ES	0.5	50	50	ENSMUST00000110011.8	ENSMUSG00000020439.18	Smtn	chr11	protein_coding	smoothelin
chr11	3481522;3482069	3482017;3482411	-	3481522	3482411	cassetteExon	0.5	100	100	ENSMUST00000110011.8	ENSMUSG00000020439.18	Smtn	chr11	protein_coding	smoothelin
chr11	3484852	3487323	-	3483523	3487323	A3SS	0.5	50	50	ENSMUST00000110011.8	ENSMUSG00000020439.18	Smtn	chr11	protein_coding	smoothelin
chr11	3487436;3487605	3487555;3489112	-	3487436	3489112	cassetteExon	0.5	100	100	ENSMUST00000075118.10	ENSMUSG00000020439.18	Smtn	chr11	protein_coding	smoothelin
chr11	3487436;3487743	3487555;3489112	-	3487436	3489112	cassetteExon	0.5	100	100	ENSMUST00000075118.10	ENSMUSG00000020439.18	Smtn	chr11	protein_coding	smoothelin
chr11	3487436;3487743	3487636;3489112	-	3487436	3489112	cassetteExon	0.5	100	100	ENSMUST00000075118.10	ENSMUSG00000020439.18	Smtn	chr11	protein_coding	smoothelin
chr11	3487436;3487743	3487671;3489112	-	3487436	3489112	cassetteExon	0.5	100	100	ENSMUST00000075118.10	ENSMUSG00000020439.18	Smtn	chr11	protein_coding	smoothelin
chr11	3487436;3487743	3487636;3489112	-	3487436;3487605	3487555;3489112	MXE	0.5	100	100	ENSMUST00000170588.8	ENSMUSG00000020439.18	Smtn	chr11	protein_coding	smoothelin
chr11	3487436;3487743	3487671;3489112	-	3487436;3487605	3487555;3489112	MXE	0.5	100	100	ENSMUST00000170588.8	ENSMUSG00000020439.18	Smtn	chr11	protein_coding	smoothelin
chr11	3467827	3471817	-	3470916	3471817	3pMXE	0.5	50	50	ENSMUST00000144635.2	ENSMUSG00000020439.18	Smtn	chr11	protein_coding	smoothelin
chr11	3487436	3487671	-	3487436	3487636	A5SS	0.25	50	50	ENSMUST00000136243.2	ENSMUSG00000020439.18	Smtn	chr11	protein_coding	smoothelin
chr11	3481953	3482419	+	3480275	3482419	A5SS	0.5	50	50	ENSMUST00000128806.2	ENSMUSG00000087291.2	Gm11946	chr11	lncRNA	predicted gene 11946
chr11	3482526	3483452	+	3482570	3483452	A5SS	0.5	50	50	ENSMUST00000128806.2	ENSMUSG00000087291.2	Gm11946	chr11	lncRNA	predicted gene 11946
chr11	3595454	3596557	-	3595523	3596557	A3SS	0.5	50	50	ENSMUST00000132077.4	ENSMUSG00000056579.19	Tug1	chr11	protein_coding	taurine upregulated gene 1
chr11	3595523	3596723	-	3595523	3596557	A5SS	0.5	50	50	ENSMUST00000132077.4	ENSMUSG00000056579.19	Tug1	chr11	protein_coding	taurine upregulated gene 1
chr11	3597078	3598900	-	3597078	3598753	5pMXE	0.5	50	50	ENSMUST00000144852.2	ENSMUSG00000056579.19	Tug1	chr11	protein_coding	taurine upregulated gene 1
chr11	3667214	3672100	-	3667214;3667986	3667794;3672100	ES	0.5	50	50	ENSMUST00000102950.10	ENSMUSG00000020435.18	Osbp2	chr11	protein_coding	oxysterol binding protein 2
chr11	3667986	3676319	-	3667986	3672100	5pMXE	0.5	50	50	ENSMUST00000102950.10	ENSMUSG00000020435.18	Osbp2	chr11	protein_coding	oxysterol binding protein 2
chr11	3667214	3672100	-	3667214	3667794	A5SS&ES	0.5	50	50	ENSMUST00000070552.14	ENSMUSG00000020435.18	Osbp2	chr11	protein_coding	oxysterol binding protein 2
chr11	3676575	3723706	-	3676575	3769837	A5SS	0.33	50	50	ENSMUST00000070552.14	ENSMUSG00000020435.18	Osbp2	chr11	protein_coding	oxysterol binding protein 2
chr11	3676575	3724587	-	3676575	3769837	A5SS	0.33	50	50	ENSMUST00000070552.14	ENSMUSG00000020435.18	Osbp2	chr11	protein_coding	oxysterol binding protein 2
chr11	3676575	3724587	-	3676575	3723706	5pMXE	0.33	50	50	ENSMUST00000127371.2	ENSMUSG00000020435.18	Osbp2	chr11	protein_coding	oxysterol binding protein 2
chr11	3845517	3846943	+	3845517	3846947	A3SS	0.5	50	50	ENSMUST00000109996.8	ENSMUSG00000047205.13	Dusp18	chr11	protein_coding	dual specificity phosphatase 18
chr11	3857984	3862569	-	3857984	3862566	A5SS	0.5	50	50	ENSMUST00000109995.2	ENSMUSG00000048807.3	Slc35e4	chr11	protein_coding	solute carrier family 35, member E4
chr11	3881587	3881927	-	3881587	3881725	5pMXE	0.25	50	50	ENSMUST00000109992.8	ENSMUSG00000020432.13	Tcn2	chr11	protein_coding	transcobalamin 2
chr11	3881587	3881976	-	3881587	3881725	5pMXE	0.25	50	50	ENSMUST00000109992.8	ENSMUSG00000020432.13	Tcn2	chr11	protein_coding	transcobalamin 2
chr11	3881587	3882013	-	3881587	3881725	5pMXE	0.25	50	50	ENSMUST00000109992.8	ENSMUSG00000020432.13	Tcn2	chr11	protein_coding	transcobalamin 2
chr11	3881584	3881725	-	3881587	3881725	A3SS	0.5	50	50	ENSMUST00000109992.8	ENSMUSG00000020432.13	Tcn2	chr11	protein_coding	transcobalamin 2
chr11	3881584	3881976	-	3881584	3881725	5pMXE	0.33	50	50	ENSMUST00000109988.2	ENSMUSG00000020432.13	Tcn2	chr11	protein_coding	transcobalamin 2
chr11	3881584	3882013	-	3881584	3881725	5pMXE	0.33	50	50	ENSMUST00000109988.2	ENSMUSG00000020432.13	Tcn2	chr11	protein_coding	transcobalamin 2
chr11	3881587	3881976	-	3881587	3881927	5pMXE	0.25	50	50	ENSMUST00000109990.8	ENSMUSG00000020432.13	Tcn2	chr11	protein_coding	transcobalamin 2
chr11	3881587	3882013	-	3881587	3881927	5pMXE	0.25	50	50	ENSMUST00000109990.8	ENSMUSG00000020432.13	Tcn2	chr11	protein_coding	transcobalamin 2
chr11	3881584	3882013	-	3881584	3881976	5pMXE	0.33	50	50	ENSMUST00000020710.11	ENSMUSG00000020432.13	Tcn2	chr11	protein_coding	transcobalamin 2
chr11	3881587	3881976	-	3881584	3881976	A3SS	0.5	50	50	ENSMUST00000020710.11	ENSMUSG00000020432.13	Tcn2	chr11	protein_coding	transcobalamin 2
chr11	3881587	3882013	-	3881587	3881976	A5SS	0.25	50	50	ENSMUST00000109989.10	ENSMUSG00000020432.13	Tcn2	chr11	protein_coding	transcobalamin 2
chr11	3881587	3882013	-	3881584	3882013	A3SS	0.5	50	50	ENSMUST00000109991.8	ENSMUSG00000020432.13	Tcn2	chr11	protein_coding	transcobalamin 2
chr11	3923368	3923449	+	3923368	3923437	A3SS	0.5	50	50	ENSMUST00000109985.8	ENSMUSG00000020430.13	Pes1	chr11	protein_coding	pescadillo ribosomal biogenesis factor 1
chr11	3920734;3923538	3923197;3925529	+	3920734	3925529	cassetteExon	0.5	100	100	ENSMUST00000137544.2	ENSMUSG00000020430.13	Pes1	chr11	protein_coding	pescadillo ribosomal biogenesis factor 1
chr11	3933840;3935158	3934941;3946909	+	3933840	3946909	cassetteExon	0.5	100	100	ENSMUST00000078757.8	ENSMUSG00000049721.15	Gal3st1	chr11	protein_coding	galactose-3-O-sulfotransferase 1
chr11	3940006	3946909	+	3933840	3946909	A5SS	0.33	50	50	ENSMUST00000078757.8	ENSMUSG00000049721.15	Gal3st1	chr11	protein_coding	galactose-3-O-sulfotransferase 1
chr11	3940006	3946909	+	3935158	3946909	A5SS	0.33	50	50	ENSMUST00000063004.14	ENSMUSG00000049721.15	Gal3st1	chr11	protein_coding	galactose-3-O-sulfotransferase 1
chr11	3989479	3989937	+	3989479;3989830	3989771;3989937	ES	0.5	50	50	ENSMUST00000129689.8	ENSMUSG00000019368.14	Sec14l4	chr11	protein_coding	SEC14-like lipid binding 4
chr11	3992251	3993287	+	3992251	3992399	3pMXE	0.5	50	50	ENSMUST00000129689.8	ENSMUSG00000019368.14	Sec14l4	chr11	protein_coding	SEC14-like lipid binding 4
chr11	3989830	3990046	+	3989830	3989937	A3SS	0.5	50	50	ENSMUST00000129689.8	ENSMUSG00000019368.14	Sec14l4	chr11	protein_coding	SEC14-like lipid binding 4
chr11	3981661	3985123	+	3981517	3985123	A5SS	0.33	50	50	ENSMUST00000129689.8	ENSMUSG00000019368.14	Sec14l4	chr11	protein_coding	SEC14-like lipid binding 4
chr11	3981899	3985123	+	3981517	3985123	A5SS	0.33	50	50	ENSMUST00000129689.8	ENSMUSG00000019368.14	Sec14l4	chr11	protein_coding	SEC14-like lipid binding 4
chr11	3981899	3989436	+	3985198	3989436	A5SS&ES	0.5	50	50	ENSMUST00000129689.8	ENSMUSG00000019368.14	Sec14l4	chr11	protein_coding	SEC14-like lipid binding 4
chr11	3993370	3993833	+	3993370	3993653	3pMXE	0.5	50	50	ENSMUST00000137324.8	ENSMUSG00000019368.14	Sec14l4	chr11	protein_coding	SEC14-like lipid binding 4
chr11	3981899	3985123	+	3981661	3985123	A5SS	0.33	50	50	ENSMUST00000126423.8	ENSMUSG00000019368.14	Sec14l4	chr11	protein_coding	SEC14-like lipid binding 4
chr11	3981899	3989436	+	3981899;3985198	3985123;3989436	ES	0.5	50	50	ENSMUST00000131171.8	ENSMUSG00000019368.14	Sec14l4	chr11	protein_coding	SEC14-like lipid binding 4
chr11	3989479	3989937	+	3989479	3989771	A3SS&ES	0.5	50	50	ENSMUST00000131171.8	ENSMUSG00000019368.14	Sec14l4	chr11	protein_coding	SEC14-like lipid binding 4
chr11	3993370	3993833	+	3993370;3993759	3993653;3993833	ES	0.5	50	50	ENSMUST00000019512.8	ENSMUSG00000019368.14	Sec14l4	chr11	protein_coding	SEC14-like lipid binding 4
chr11	3993370	3993833	+	3993759	3993833	A5SS	0.5	50	50	ENSMUST00000136222.8	ENSMUSG00000019368.14	Sec14l4	chr11	protein_coding	SEC14-like lipid binding 4
chr11	4015005	4016460	+	4015005;4016212	4016137;4016460	ES	0.5	50	50	ENSMUST00000068322.7	ENSMUSG00000054986.14	Sec14l3	chr11	protein_coding	SEC14-like lipid binding 3
chr11	4016503	4017956	+	4016503;4016699	4016640;4017956	ES	0.5	50	50	ENSMUST00000068322.7	ENSMUSG00000054986.14	Sec14l3	chr11	protein_coding	SEC14-like lipid binding 3
chr11	4016699	4018065	+	4016699	4017956	A3SS	0.5	50	50	ENSMUST00000068322.7	ENSMUSG00000054986.14	Sec14l3	chr11	protein_coding	SEC14-like lipid binding 3
chr11	4016503	4017956	+	4016503	4016640	A3SS&ES	0.5	50	50	ENSMUST00000123208.8	ENSMUSG00000054986.14	Sec14l3	chr11	protein_coding	SEC14-like lipid binding 3
chr11	4021495	4024720	+	4021495	4025392	A3SS	0.5	50	50	ENSMUST00000126396.2	ENSMUSG00000054986.14	Sec14l3	chr11	protein_coding	SEC14-like lipid binding 3
chr11	4025305	4025392	+	4021495	4025392	A5SS	0.5	50	50	ENSMUST00000126396.2	ENSMUSG00000054986.14	Sec14l3	chr11	protein_coding	SEC14-like lipid binding 3
chr11	4044516	4044814	-	4044516	4045216	A5SS	0.5	50	50	ENSMUST00000004868.6	ENSMUSG00000004748.6	Mtfp1	chr11	protein_coding	mitochondrial fission process 1
chr11	4053813	4058497	-	4053813;4054001	4053895;4058497	ES	0.5	50	50	ENSMUST00000003681.8	ENSMUSG00000003585.14	Sec14l2	chr11	protein_coding	SEC14-like lipid binding 2
chr11	4061225	4061894	-	4061225;4061502	4061443;4061894	ES	0.5	50	50	ENSMUST00000003681.8	ENSMUSG00000003585.14	Sec14l2	chr11	protein_coding	SEC14-like lipid binding 2
chr11	4061937	4068625	-	4061937;4066756	4066681;4068625	ES	0.5	50	50	ENSMUST00000003681.8	ENSMUSG00000003585.14	Sec14l2	chr11	protein_coding	SEC14-like lipid binding 2
chr11	4061937	4073166	-	4061937	4068625	5pMXE	0.33	50	50	ENSMUST00000123901.8	ENSMUSG00000003585.14	Sec14l2	chr11	protein_coding	SEC14-like lipid binding 2
chr11	4061937	4066681	-	4061937	4073166	A5SS	0.33	50	50	ENSMUST00000145173.2	ENSMUSG00000003585.14	Sec14l2	chr11	protein_coding	SEC14-like lipid binding 2
chr11	4061937	4068625	-	4066756	4068625	3pMXE	0.5	50	50	ENSMUST00000136420.2	ENSMUSG00000003585.14	Sec14l2	chr11	protein_coding	SEC14-like lipid binding 2
chr11	4085563	4086560	+	4085563;4085957	4085814;4086560	ES	0.5	50	50	ENSMUST00000003677.11	ENSMUSG00000003581.15	Rnf215	chr11	protein_coding	ring finger protein 215
chr11	4086797	4087309	+	4086797	4087212	A3SS	0.5	50	50	ENSMUST00000003677.11	ENSMUSG00000003581.15	Rnf215	chr11	protein_coding	ring finger protein 215
chr11	4100102;4101524	4101389;4101672	-	4100102	4101672	cassetteExon	0.5	100	100	ENSMUST00000093381.11	ENSMUSG00000051427.15	Ccdc157	chr11	protein_coding	coiled-coil domain containing 157
chr11	4100102;4101524	4101392;4101672	-	4100102	4101672	cassetteExon	0.5	100	100	ENSMUST00000093381.11	ENSMUSG00000051427.15	Ccdc157	chr11	protein_coding	coiled-coil domain containing 157
chr11	4100102;4108289	4108160;4110159	-	4100102;4103056	4101672;4110159	MXE	0.5	100	100	ENSMUST00000093381.11	ENSMUSG00000051427.15	Ccdc157	chr11	protein_coding	coiled-coil domain containing 157
chr11	4101796	4102909	-	4101930	4102909	A3SS	0.5	50	50	ENSMUST00000093381.11	ENSMUSG00000051427.15	Ccdc157	chr11	protein_coding	coiled-coil domain containing 157
chr11	4100102;4108289	4108160;4110159	-	4100102;4103056	4101389;4110159	MXE	0.5	100	100	ENSMUST00000101626.9	ENSMUSG00000051427.15	Ccdc157	chr11	protein_coding	coiled-coil domain containing 157
chr11	4100102	4101392	-	4100102	4101389	A5SS	0.25	50	50	ENSMUST00000101626.9	ENSMUSG00000051427.15	Ccdc157	chr11	protein_coding	coiled-coil domain containing 157
chr11	4103056	4110159	-	4108289	4110159	A3SS&ES	0.5	50	50	ENSMUST00000139099.8	ENSMUSG00000051427.15	Ccdc157	chr11	protein_coding	coiled-coil domain containing 157
chr11	4100102	4101389	-	4100102	4108160	A5SS	0.25	50	50	ENSMUST00000139099.8	ENSMUSG00000051427.15	Ccdc157	chr11	protein_coding	coiled-coil domain containing 157
chr11	4100102	4101392	-	4100102	4108160	A5SS	0.25	50	50	ENSMUST00000139099.8	ENSMUSG00000051427.15	Ccdc157	chr11	protein_coding	coiled-coil domain containing 157
chr11	4100102	4101672	-	4100102	4108160	A5SS	0.25	50	50	ENSMUST00000139099.8	ENSMUSG00000051427.15	Ccdc157	chr11	protein_coding	coiled-coil domain containing 157
chr11	4100102;4108289	4108160;4110159	-	4100102;4103056	4101392;4110159	MXE	0.5	100	100	ENSMUST00000133962.8	ENSMUSG00000051427.15	Ccdc157	chr11	protein_coding	coiled-coil domain containing 157
chr11	4100102	4101672	-	4101524	4101672	3pMXE	0.5	50	50	ENSMUST00000132712.2	ENSMUSG00000051427.15	Ccdc157	chr11	protein_coding	coiled-coil domain containing 157
chr11	4111167	4116496	+	4111167	4121062	A3SS	0.5	50	50	ENSMUST00000129583.8	ENSMUSG00000002129.12	Sf3a1	chr11	protein_coding	splicing factor 3a, subunit 1
chr11	4117890	4121062	+	4111167	4121062	A5SS	0.5	50	50	ENSMUST00000129583.8	ENSMUSG00000002129.12	Sf3a1	chr11	protein_coding	splicing factor 3a, subunit 1
chr11	4160033;4162247	4162141;4162785	+	4160033	4162785	cassetteExon	0.5	100	100	ENSMUST00000147485.8	ENSMUSG00000034412.14	Tbc1d10a	chr11	protein_coding	TBC1 domain family, member 10a
chr11	4155646	4155757	+	4137099	4155757	A5SS	0.5	50	50	ENSMUST00000147485.8	ENSMUSG00000034412.14	Tbc1d10a	chr11	protein_coding	TBC1 domain family, member 10a
chr11	4186913;4188542	4188406;4189386	+	4186913	4189386	cassetteExon	0.5	100	100	ENSMUST00000131764.2	ENSMUSG00000058755.4	Osm	chr11	protein_coding	oncostatin M
chr11	4217119	4218184	+	4216617	4218184	A5SS	0.5	50	50	ENSMUST00000066283.12	ENSMUSG00000034394.15	Lif	chr11	protein_coding	leukemia inhibitory factor
chr11	4385089	4390877	-	4385089	4390483	5pMXE	0.25	50	50	ENSMUST00000109948.8	ENSMUSG00000020419.12	Hormad2	chr11	protein_coding	HORMA domain containing 2
chr11	4385089	4391016	-	4385089	4390483	5pMXE	0.25	50	50	ENSMUST00000109948.8	ENSMUSG00000020419.12	Hormad2	chr11	protein_coding	HORMA domain containing 2
chr11	4374819;4375626	4375506;4377244	-	4374819	4377244	cassetteExon	0.5	100	100	ENSMUST00000109948.8	ENSMUSG00000020419.12	Hormad2	chr11	protein_coding	HORMA domain containing 2
chr11	4385089	4385543	-	4385089	4390483	A5SS	0.25	50	50	ENSMUST00000109948.8	ENSMUSG00000020419.12	Hormad2	chr11	protein_coding	HORMA domain containing 2
chr11	4385089	4385543	-	4385089	4391016	A5SS	0.25	50	50	ENSMUST00000020689.10	ENSMUSG00000020419.12	Hormad2	chr11	protein_coding	HORMA domain containing 2
chr11	4385089	4390877	-	4385089	4391016	A5SS	0.25	50	50	ENSMUST00000020689.10	ENSMUSG00000020419.12	Hormad2	chr11	protein_coding	HORMA domain containing 2
chr11	4385089	4385543	-	4385089	4390877	A5SS	0.25	50	50	ENSMUST00000109949.8	ENSMUSG00000020419.12	Hormad2	chr11	protein_coding	HORMA domain containing 2
chr11	4432939;4434697	4434671;4435363	-	4432939	4435363	cassetteExon	0.5	100	100	ENSMUST00000109943.10	ENSMUSG00000034354.18	Mtmr3	chr11	protein_coding	myotubularin related protein 3
chr11	4435451;4435989	4435879;4437234	-	4435451	4437234	cassetteExon	0.5	100	100	ENSMUST00000109943.10	ENSMUSG00000034354.18	Mtmr3	chr11	protein_coding	myotubularin related protein 3
chr11	4435451	4437225	-	4435451	4437234	A5SS	0.33	50	50	ENSMUST00000109943.10	ENSMUSG00000034354.18	Mtmr3	chr11	protein_coding	myotubularin related protein 3
chr11	4481305	4496189	-	4481305	4544603	A5SS	0.5	50	50	ENSMUST00000109943.10	ENSMUSG00000034354.18	Mtmr3	chr11	protein_coding	myotubularin related protein 3
chr11	4435451	4437225	-	4435451	4435879	A5SS	0.33	50	50	ENSMUST00000155566.8	ENSMUSG00000034354.18	Mtmr3	chr11	protein_coding	myotubularin related protein 3
chr11	4435451	4437234	-	4435451	4435879	A5SS	0.33	50	50	ENSMUST00000155566.8	ENSMUSG00000034354.18	Mtmr3	chr11	protein_coding	myotubularin related protein 3
chr11	4576935	4579418	-	4576935	4577682	5pMXE	0.5	50	50	ENSMUST00000135775.8	ENSMUSG00000056288.12	Gm11961	chr11	lncRNA	predicted gene 11961
chr11	4575503	4576419	-	4570991	4576419	A3SS	0.5	50	50	ENSMUST00000135775.8	ENSMUSG00000056288.12	Gm11961	chr11	lncRNA	predicted gene 11961
chr11	4622497	4629252	+	4622497;4623447	4623328;4629252	ES	0.5	50	50	ENSMUST00000070257.14	ENSMUSG00000020412.17	Ascc2	chr11	protein_coding	activating signal cointegrator 1 complex subunit 2
chr11	4652220;4653989	4653904;4654157	-	4652220	4654157	cassetteExon	0.5	100	100	ENSMUST00000058407.6	ENSMUSG00000059534.9	Uqcr10	chr11	protein_coding	ubiquinol-cytochrome c reductase, complex III subunit X
chr11	4652220	4654157	-	4652220	4653904	5pMXE	0.5	50	50	ENSMUST00000130236.2	ENSMUSG00000059534.9	Uqcr10	chr11	protein_coding	ubiquinol-cytochrome c reductase, complex III subunit X
chr11	4680267	4681956	+	4680267	4682067	A3SS	0.5	50	50	ENSMUST00000009220.5	ENSMUSG00000009076.11	Zmat5	chr11	protein_coding	zinc finger, matrin type 5
chr11	4744917	4753678	-	4744917;4749995	4749861;4753678	ES	0.5	50	50	ENSMUST00000109910.9	ENSMUSG00000009073.17	Nf2	chr11	protein_coding	neurofibromin 2
chr11	4766165	4770368	-	4766165;4768627	4768505;4770368	ES	0.5	50	50	ENSMUST00000109910.9	ENSMUSG00000009073.17	Nf2	chr11	protein_coding	neurofibromin 2
chr11	4718273;4730622	4730578;4732187	-	4718273	4732187	cassetteExon	0.5	100	100	ENSMUST00000109910.9	ENSMUSG00000009073.17	Nf2	chr11	protein_coding	neurofibromin 2
chr11	4758325;4758834	4758696;4766082	-	4758325	4766082	cassetteExon	0.5	100	100	ENSMUST00000109910.9	ENSMUSG00000009073.17	Nf2	chr11	protein_coding	neurofibromin 2
chr11	4780121	4798872	-	4770493	4798872	A3SS	0.5	50	50	ENSMUST00000109910.9	ENSMUSG00000009073.17	Nf2	chr11	protein_coding	neurofibromin 2
chr11	4758325	4765147	-	4758325	4766082	A5SS	0.33	50	50	ENSMUST00000109910.9	ENSMUSG00000009073.17	Nf2	chr11	protein_coding	neurofibromin 2
chr11	4770493	4774830	-	4770493	4798872	A5SS	0.33	50	50	ENSMUST00000109910.9	ENSMUSG00000009073.17	Nf2	chr11	protein_coding	neurofibromin 2
chr11	4770493	4782998	-	4770493	4798872	A5SS	0.33	50	50	ENSMUST00000109910.9	ENSMUSG00000009073.17	Nf2	chr11	protein_coding	neurofibromin 2
chr11	4722638	4730578	-	4718273	4730578	A3SS	0.33	50	50	ENSMUST00000056290.13	ENSMUSG00000009073.17	Nf2	chr11	protein_coding	neurofibromin 2
chr11	4730034	4730578	-	4718273	4730578	A3SS	0.33	50	50	ENSMUST00000056290.13	ENSMUSG00000009073.17	Nf2	chr11	protein_coding	neurofibromin 2
chr11	4730034	4730578	-	4722638	4730578	A3SS	0.33	50	50	ENSMUST00000053079.13	ENSMUSG00000009073.17	Nf2	chr11	protein_coding	neurofibromin 2
chr11	4770493	4774830	-	4770493	4782998	A5SS	0.33	50	50	ENSMUST00000109908.8	ENSMUSG00000009073.17	Nf2	chr11	protein_coding	neurofibromin 2
chr11	4741213	4744412	-	4737549	4744412	A3SS	0.5	50	50	ENSMUST00000152656.8	ENSMUSG00000009073.17	Nf2	chr11	protein_coding	neurofibromin 2
chr11	4758325	4766082	-	4749995	4766082	A3SS	0.33	50	50	ENSMUST00000152656.8	ENSMUSG00000009073.17	Nf2	chr11	protein_coding	neurofibromin 2
chr11	4758834	4766082	-	4749995	4766082	A3SS	0.33	50	50	ENSMUST00000152656.8	ENSMUSG00000009073.17	Nf2	chr11	protein_coding	neurofibromin 2
chr11	4737549	4739665	-	4737549	4744412	A5SS	0.5	50	50	ENSMUST00000152656.8	ENSMUSG00000009073.17	Nf2	chr11	protein_coding	neurofibromin 2
chr11	4744917	4753678	-	4744917	4749861	A5SS&ES	0.5	50	50	ENSMUST00000152656.8	ENSMUSG00000009073.17	Nf2	chr11	protein_coding	neurofibromin 2
chr11	4749995	4753678	-	4749995	4766082	A5SS	0.5	50	50	ENSMUST00000152656.8	ENSMUSG00000009073.17	Nf2	chr11	protein_coding	neurofibromin 2
chr11	4744917;4749995	4749861;4766082	-	4744917;4758325	4753678;4766082	MXE	0.5	100	100	ENSMUST00000164190.8	ENSMUSG00000009073.17	Nf2	chr11	protein_coding	neurofibromin 2
chr11	4758325	4758696	-	4758325	4765147	A5SS	0.33	50	50	ENSMUST00000155600.8	ENSMUSG00000009073.17	Nf2	chr11	protein_coding	neurofibromin 2
chr11	4766165	4770368	-	4766165	4768505	5pMXE	0.5	50	50	ENSMUST00000137926.9	ENSMUSG00000009073.17	Nf2	chr11	protein_coding	neurofibromin 2
chr11	4744917	4753678	-	4749995	4753678	3pMXE	0.5	50	50	ENSMUST00000124878.3	ENSMUSG00000009073.17	Nf2	chr11	protein_coding	neurofibromin 2
chr11	4766165	4770368	-	4768627	4770368	3pMXE	0.5	50	50	ENSMUST00000167480.2	ENSMUSG00000009073.17	Nf2	chr11	protein_coding	neurofibromin 2
chr11	4834116	4839097	+	4834116;4838950	4838880;4839097	ES	0.5	50	50	ENSMUST00000038570.9	ENSMUSG00000034285.16	Nipsnap1	chr11	protein_coding	nipsnap homolog 1
chr11	4824103;4833171	4832901;4833368	+	4824103	4833368	cassetteExon	0.5	100	100	ENSMUST00000038570.9	ENSMUSG00000034285.16	Nipsnap1	chr11	protein_coding	nipsnap homolog 1
chr11	4824103;4833253	4832901;4833368	+	4824103	4833368	cassetteExon	0.5	100	100	ENSMUST00000038570.9	ENSMUSG00000034285.16	Nipsnap1	chr11	protein_coding	nipsnap homolog 1
chr11	4833253	4833368	+	4833171	4833368	A5SS	0.33	50	50	ENSMUST00000136552.8	ENSMUSG00000034285.16	Nipsnap1	chr11	protein_coding	nipsnap homolog 1
chr11	4824103	4833368	+	4833253	4833368	5pMXE	0.33	50	50	ENSMUST00000139737.2	ENSMUSG00000034285.16	Nipsnap1	chr11	protein_coding	nipsnap homolog 1
chr11	4849906;4851295	4851152;4852086	+	4849906	4852086	cassetteExon	0.5	100	100	ENSMUST00000101615.9	ENSMUSG00000034274.12	Thoc5	chr11	protein_coding	THO complex 5
chr11	4860759;4861470	4861435;4862781	+	4860759	4862781	cassetteExon	0.5	100	100	ENSMUST00000101615.9	ENSMUSG00000034274.12	Thoc5	chr11	protein_coding	THO complex 5
chr11	4860759;4861563	4861435;4862781	+	4860759	4862781	cassetteExon	0.5	100	100	ENSMUST00000101615.9	ENSMUSG00000034274.12	Thoc5	chr11	protein_coding	THO complex 5
chr11	4860759;4861563	4861529;4862781	+	4860759	4862781	cassetteExon	0.5	100	100	ENSMUST00000101615.9	ENSMUSG00000034274.12	Thoc5	chr11	protein_coding	THO complex 5
chr11	4860759;4861470	4861435;4862781	+	4860759;4861563	4861529;4862781	MXE	0.5	100	100	ENSMUST00000144371.2	ENSMUSG00000034274.12	Thoc5	chr11	protein_coding	THO complex 5
chr11	4937051	4962882	+	4937051;4959592	4959530;4962882	ES	0.5	50	50	ENSMUST00000109897.8	ENSMUSG00000009090.18	Ap1b1	chr11	protein_coding	adaptor protein complex AP-1, beta 1 subunit
chr11	4959592	4965606	+	4959592;4962987	4962882;4965606	ES	0.5	50	50	ENSMUST00000109897.8	ENSMUSG00000009090.18	Ap1b1	chr11	protein_coding	adaptor protein complex AP-1, beta 1 subunit
chr11	4982619;4983262	4983242;4983687	+	4982619	4983687	cassetteExon	0.5	100	100	ENSMUST00000109897.8	ENSMUSG00000009090.18	Ap1b1	chr11	protein_coding	adaptor protein complex AP-1, beta 1 subunit
chr11	4966851	4968016	+	4966851	4968097	A3SS	0.5	50	50	ENSMUST00000109897.8	ENSMUSG00000009090.18	Ap1b1	chr11	protein_coding	adaptor protein complex AP-1, beta 1 subunit
chr11	4937051;4959592	4959530;4965606	+	4937051;4962987	4962882;4965606	MXE	0.5	100	100	ENSMUST00000137292.8	ENSMUSG00000009090.18	Ap1b1	chr11	protein_coding	adaptor protein complex AP-1, beta 1 subunit
chr11	4937051	4962882	+	4959592	4962882	5pMXE	0.5	50	50	ENSMUST00000144426.2	ENSMUSG00000009090.18	Ap1b1	chr11	protein_coding	adaptor protein complex AP-1, beta 1 subunit
chr11	5012326;5012511	5012415;5012594	-	5012326	5012594	cassetteExon	0.5	100	100	ENSMUST00000122886.8	ENSMUSG00000034201.14	Gas2l1	chr11	protein_coding	growth arrest-specific 2 like 1
chr11	5014478;5015015	5014837;5015215	-	5014478	5015215	cassetteExon	0.5	100	100	ENSMUST00000122886.8	ENSMUSG00000034201.14	Gas2l1	chr11	protein_coding	growth arrest-specific 2 like 1
chr11	5014478;5015094	5014837;5015215	-	5014478	5015215	cassetteExon	0.5	100	100	ENSMUST00000122886.8	ENSMUSG00000034201.14	Gas2l1	chr11	protein_coding	growth arrest-specific 2 like 1
chr11	5011817	5012155	-	5006689	5012155	A3SS	0.5	50	50	ENSMUST00000122886.8	ENSMUSG00000034201.14	Gas2l1	chr11	protein_coding	growth arrest-specific 2 like 1
chr11	5015015	5015215	-	5015094	5015215	A3SS	0.33	50	50	ENSMUST00000037146.10	ENSMUSG00000034201.14	Gas2l1	chr11	protein_coding	growth arrest-specific 2 like 1
chr11	5014478	5015215	-	5014478	5014837	5pMXE	0.5	50	50	ENSMUST00000156196.2	ENSMUSG00000034201.14	Gas2l1	chr11	protein_coding	growth arrest-specific 2 like 1
chr11	5014478	5015215	-	5015094	5015215	A3SS	0.33	50	50	ENSMUST00000151936.2	ENSMUSG00000034201.14	Gas2l1	chr11	protein_coding	growth arrest-specific 2 like 1
chr11	5009268	5009433	+	5008524	5009433	A5SS	0.5	50	50	ENSMUST00000037218.2	ENSMUSG00000034209.5	Rasl10a	chr11	protein_coding	RAS-like, family 10, member A
chr11	5028952	5032253	-	5028952;5029519	5029485;5032253	ES	0.33	50	50	ENSMUST00000079949.13	ENSMUSG00000009079.17	Ewsr1	chr11	protein_coding	Ewing sarcoma breakpoint region 1
chr11	5038146;5041477	5041460;5041859	-	5038146	5041859	cassetteExon	0.5	100	100	ENSMUST00000079949.13	ENSMUSG00000009079.17	Ewsr1	chr11	protein_coding	Ewing sarcoma breakpoint region 1
chr11	5030688	5032253	-	5029519	5032253	A3SS	0.33	50	50	ENSMUST00000079949.13	ENSMUSG00000009079.17	Ewsr1	chr11	protein_coding	Ewing sarcoma breakpoint region 1
chr11	5043568	5043681	-	5041982	5043681	A3SS	0.5	50	50	ENSMUST00000079949.13	ENSMUSG00000009079.17	Ewsr1	chr11	protein_coding	Ewing sarcoma breakpoint region 1
chr11	5028952	5032253	-	5028952	5029485	5pMXE	0.5	50	50	ENSMUST00000139886.2	ENSMUSG00000009079.17	Ewsr1	chr11	protein_coding	Ewing sarcoma breakpoint region 1
chr11	5030688	5032253	-	5028952	5032253	A3SS	0.33	50	50	ENSMUST00000150168.8	ENSMUSG00000009079.17	Ewsr1	chr11	protein_coding	Ewing sarcoma breakpoint region 1
chr11	5038146	5041859	-	5041477	5041859	3pMXE	0.5	50	50	ENSMUST00000063232.7	ENSMUSG00000009079.17	Ewsr1	chr11	protein_coding	Ewing sarcoma breakpoint region 1
chr11	5050587;5051416	5051336;5051869	+	5050587	5051869	cassetteExon	0.5	100	100	ENSMUST00000101610.10	ENSMUSG00000034175.14	Rhbdd3	chr11	protein_coding	rhomboid domain containing 3
chr11	5049898	5050385	+	5049898	5050397	A3SS	0.5	50	50	ENSMUST00000101610.10	ENSMUSG00000034175.14	Rhbdd3	chr11	protein_coding	rhomboid domain containing 3
chr11	5054404	5055181	+	5054404	5055185	A3SS	0.5	50	50	ENSMUST00000101610.10	ENSMUSG00000034175.14	Rhbdd3	chr11	protein_coding	rhomboid domain containing 3
chr11	5049272	5049748	+	5049566	5049748	A5SS	0.33	50	50	ENSMUST00000101610.10	ENSMUSG00000034175.14	Rhbdd3	chr11	protein_coding	rhomboid domain containing 3
chr11	5049477	5049748	+	5049566	5049748	A5SS	0.33	50	50	ENSMUST00000101610.10	ENSMUSG00000034175.14	Rhbdd3	chr11	protein_coding	rhomboid domain containing 3
chr11	5050226	5050397	+	5049898	5050397	A5SS	0.5	50	50	ENSMUST00000101610.10	ENSMUSG00000034175.14	Rhbdd3	chr11	protein_coding	rhomboid domain containing 3
chr11	5055313	5055433	+	5055347	5055433	A5SS	0.5	50	50	ENSMUST00000101610.10	ENSMUSG00000034175.14	Rhbdd3	chr11	protein_coding	rhomboid domain containing 3
chr11	5049477	5049748	+	5049272	5049748	A5SS	0.33	50	50	ENSMUST00000137370.8	ENSMUSG00000034175.14	Rhbdd3	chr11	protein_coding	rhomboid domain containing 3
chr11	5056969	5066880	-	5056969;5059634	5059544;5066880	ES	0.25	50	50	ENSMUST00000132328.8	ENSMUSG00000034164.18	Emid1	chr11	protein_coding	EMI domain containing 1
chr11	5056969;5057788	5057724;5059544	-	5056969	5059544	cassetteExon	0.5	100	100	ENSMUST00000132328.8	ENSMUSG00000034164.18	Emid1	chr11	protein_coding	EMI domain containing 1
chr11	5056969;5060774	5060690;5066880	-	5056969;5059634	5059544;5066880	MXE	0.5	100	100	ENSMUST00000132328.8	ENSMUSG00000034164.18	Emid1	chr11	protein_coding	EMI domain containing 1
chr11	5056969;5066630	5066477;5066880	-	5056969;5059634	5059544;5066880	MXE	0.5	100	100	ENSMUST00000132328.8	ENSMUSG00000034164.18	Emid1	chr11	protein_coding	EMI domain containing 1
chr11	5056969	5066880	-	5056969;5060774	5060690;5066880	ES	0.25	50	50	ENSMUST00000062821.13	ENSMUSG00000034164.18	Emid1	chr11	protein_coding	EMI domain containing 1
chr11	5056969;5066630	5066477;5066880	-	5056969;5060774	5060690;5066880	MXE	0.5	100	100	ENSMUST00000062821.13	ENSMUSG00000034164.18	Emid1	chr11	protein_coding	EMI domain containing 1
chr11	5082040;5084172	5084074;5084349	-	5082040	5084349	cassetteExon	0.5	100	100	ENSMUST00000062821.13	ENSMUSG00000034164.18	Emid1	chr11	protein_coding	EMI domain containing 1
chr11	5093924	5094295	-	5093930	5094295	A3SS	0.5	50	50	ENSMUST00000062821.13	ENSMUSG00000034164.18	Emid1	chr11	protein_coding	EMI domain containing 1
chr11	5056969	5057724	-	5056969	5060690	A5SS	0.2	50	50	ENSMUST00000062821.13	ENSMUSG00000034164.18	Emid1	chr11	protein_coding	EMI domain containing 1
chr11	5094408	5099922	-	5094408	5102122	A5SS	0.5	50	50	ENSMUST00000062821.13	ENSMUSG00000034164.18	Emid1	chr11	protein_coding	EMI domain containing 1
chr11	5056969;5060774	5060690;5066880	-	5056969;5059634	5057724;5066880	MXE	0.5	100	100	ENSMUST00000151906.8	ENSMUSG00000034164.18	Emid1	chr11	protein_coding	EMI domain containing 1
chr11	5056969;5066630	5066477;5066880	-	5056969;5059634	5057724;5066880	MXE	0.5	100	100	ENSMUST00000151906.8	ENSMUSG00000034164.18	Emid1	chr11	protein_coding	EMI domain containing 1
chr11	5056969;5066630	5066477;5066880	-	5056969	5066880	cassetteExon	0.5	100	100	ENSMUST00000132196.2	ENSMUSG00000034164.18	Emid1	chr11	protein_coding	EMI domain containing 1
chr11	5056969	5057724	-	5056969	5066880	A5SS	0.2	50	50	ENSMUST00000132196.2	ENSMUSG00000034164.18	Emid1	chr11	protein_coding	EMI domain containing 1
chr11	5056969	5057724	-	5056969	5066477	A5SS	0.2	50	50	ENSMUST00000153308.2	ENSMUSG00000034164.18	Emid1	chr11	protein_coding	EMI domain containing 1
chr11	5157698	5159939	-	5152029	5159939	A3SS	0.5	50	50	ENSMUST00000020662.15	ENSMUSG00000020393.17	Kremen1	chr11	protein_coding	kringle containing transmembrane protein 1
chr11	5288763	5320531	-	5288763	5394388	A5SS	0.5	50	50	ENSMUST00000109867.8	ENSMUSG00000041961.15	Znrf3	chr11	protein_coding	zinc and ring finger 3
chr11	5524333	5525645	+	5524333	5525639	A3SS	0.5	50	50	ENSMUST00000109856.8	ENSMUSG00000020481.16	Ankrd36	chr11	protein_coding	ankyrin repeat domain 36
chr11	5534043	5540829	+	5534043	5546714	A3SS	0.5	50	50	ENSMUST00000109856.8	ENSMUSG00000020481.16	Ankrd36	chr11	protein_coding	ankyrin repeat domain 36
chr11	5580795	5582136	+	5580795	5582139	A3SS	0.5	50	50	ENSMUST00000109856.8	ENSMUSG00000020481.16	Ankrd36	chr11	protein_coding	ankyrin repeat domain 36
chr11	5593850	5594912	+	5593850	5594834	A3SS&ES	0.5	50	50	ENSMUST00000109856.8	ENSMUSG00000020481.16	Ankrd36	chr11	protein_coding	ankyrin repeat domain 36
chr11	5542864	5546714	+	5534043	5546714	A5SS	0.5	50	50	ENSMUST00000109856.8	ENSMUSG00000020481.16	Ankrd36	chr11	protein_coding	ankyrin repeat domain 36
chr11	5657555	5662498	-	5657555	5657624	5pMXE	0.5	50	50	ENSMUST00000154330.2	ENSMUSG00000020477.11	Mrps24	chr11	protein_coding	mitochondrial ribosomal protein S24
chr11	5673161	5676831	-	5673161;5676418	5676348;5676831	ES	0.5	50	50	ENSMUST00000093362.12	ENSMUSG00000049680.18	Urgcp	chr11	protein_coding	upregulator of cell proliferation
chr11	5676857	5711881	-	5676857	5691097	5pMXE	0.33	50	50	ENSMUST00000093362.12	ENSMUSG00000049680.18	Urgcp	chr11	protein_coding	upregulator of cell proliferation
chr11	5676857	5682065	-	5676857	5691097	A5SS	0.33	50	50	ENSMUST00000093362.12	ENSMUSG00000049680.18	Urgcp	chr11	protein_coding	upregulator of cell proliferation
chr11	5673161	5676831	-	5673161	5676348	A5SS&ES	0.5	50	50	ENSMUST00000170116.8	ENSMUSG00000049680.18	Urgcp	chr11	protein_coding	upregulator of cell proliferation
chr11	5676857;5682311	5682065;5711881	-	5676857	5711881	cassetteExon	0.5	100	100	ENSMUST00000120306.8	ENSMUSG00000049680.18	Urgcp	chr11	protein_coding	upregulator of cell proliferation
chr11	5712240	5730206	+	5712240;5715571	5715509;5730206	ES	0.33	50	50	ENSMUST00000137510.8	ENSMUSG00000083844.9	Ube2d-ps	chr11	transcribed_unprocessed_pseudogene	ubiquitin-conjugating enzyme E2D, pseudogene
chr11	5715571;5719243	5718886;5730206	+	5715571	5730206	cassetteExon	0.5	100	100	ENSMUST00000137510.8	ENSMUSG00000083844.9	Ube2d-ps	chr11	transcribed_unprocessed_pseudogene	ubiquitin-conjugating enzyme E2D, pseudogene
chr11	5715571;5719243	5719042;5730206	+	5715571	5730206	cassetteExon	0.5	100	100	ENSMUST00000137510.8	ENSMUSG00000083844.9	Ube2d-ps	chr11	transcribed_unprocessed_pseudogene	ubiquitin-conjugating enzyme E2D, pseudogene
chr11	5715571;5719243	5719167;5730206	+	5715571	5730206	cassetteExon	0.5	100	100	ENSMUST00000137510.8	ENSMUSG00000083844.9	Ube2d-ps	chr11	transcribed_unprocessed_pseudogene	ubiquitin-conjugating enzyme E2D, pseudogene
chr11	5719243	5730206	+	5712240	5730206	A5SS	0.33	50	50	ENSMUST00000131130.8	ENSMUSG00000083844.9	Ube2d-ps	chr11	transcribed_unprocessed_pseudogene	ubiquitin-conjugating enzyme E2D, pseudogene
chr11	5730311	5732185	+	5730653	5732185	A5SS	0.33	50	50	ENSMUST00000131130.8	ENSMUSG00000083844.9	Ube2d-ps	chr11	transcribed_unprocessed_pseudogene	ubiquitin-conjugating enzyme E2D, pseudogene
chr11	5730635	5732185	+	5730653	5732185	A5SS	0.33	50	50	ENSMUST00000131130.8	ENSMUSG00000083844.9	Ube2d-ps	chr11	transcribed_unprocessed_pseudogene	ubiquitin-conjugating enzyme E2D, pseudogene
chr11	5715571	5719167	+	5715571;5719072	5718886;5719167	ES	0.5	50	50	ENSMUST00000142942.8	ENSMUSG00000083844.9	Ube2d-ps	chr11	transcribed_unprocessed_pseudogene	ubiquitin-conjugating enzyme E2D, pseudogene
chr11	5715571	5719042	+	5715571	5718886	A3SS	0.25	50	50	ENSMUST00000142942.8	ENSMUSG00000083844.9	Ube2d-ps	chr11	transcribed_unprocessed_pseudogene	ubiquitin-conjugating enzyme E2D, pseudogene
chr11	5730311	5732185	+	5730635	5732185	A5SS	0.33	50	50	ENSMUST00000142942.8	ENSMUSG00000083844.9	Ube2d-ps	chr11	transcribed_unprocessed_pseudogene	ubiquitin-conjugating enzyme E2D, pseudogene
chr11	5732278	5733892	+	5732357	5733892	A5SS	0.5	50	50	ENSMUST00000142942.8	ENSMUSG00000083844.9	Ube2d-ps	chr11	transcribed_unprocessed_pseudogene	ubiquitin-conjugating enzyme E2D, pseudogene
chr11	5715571	5719167	+	5715571;5719072	5719042;5719167	ES	0.5	50	50	ENSMUST00000121354.8	ENSMUSG00000083844.9	Ube2d-ps	chr11	transcribed_unprocessed_pseudogene	ubiquitin-conjugating enzyme E2D, pseudogene
chr11	5747175	5747275	+	5747175	5747287	A3SS	0.33	50	50	ENSMUST00000109845.8	ENSMUSG00000020476.15	Dbnl	chr11	protein_coding	drebrin-like
chr11	5747175	5747284	+	5747175	5747287	A3SS	0.33	50	50	ENSMUST00000109845.8	ENSMUSG00000020476.15	Dbnl	chr11	protein_coding	drebrin-like
chr11	5747175	5747284	+	5747175	5747275	A3SS	0.33	50	50	ENSMUST00000020769.14	ENSMUSG00000020476.15	Dbnl	chr11	protein_coding	drebrin-like
chr11	5786374;5787478	5787289;5787561	-	5786374	5787561	cassetteExon	0.5	100	100	ENSMUST00000109837.8	ENSMUSG00000020474.12	Polm	chr11	protein_coding	polymerase (DNA directed), mu
chr11	5779393	5779477	-	5779394	5779477	A3SS	0.5	50	50	ENSMUST00000020767.4	ENSMUSG00000020474.12	Polm	chr11	protein_coding	polymerase (DNA directed), mu
chr11	5786374	5787561	-	5786374	5787289	A5SS	0.5	50	50	ENSMUST00000153987.2	ENSMUSG00000020474.12	Polm	chr11	protein_coding	polymerase (DNA directed), mu
chr11	5825213	5826713	-	5825175	5826713	A3SS	0.5	50	50	ENSMUST00000102922.10	ENSMUSG00000020471.12	Pold2	chr11	protein_coding	polymerase (DNA directed), delta 2, regulatory subunit
chr11	5826989	5827580	-	5826989	5828192	A5SS	0.5	50	50	ENSMUST00000102922.10	ENSMUSG00000020471.12	Pold2	chr11	protein_coding	polymerase (DNA directed), delta 2, regulatory subunit
chr11	5861024	5899555	-	5861024	5864967	5pMXE	0.5	50	50	ENSMUST00000109823.9	ENSMUSG00000041798.16	Gck	chr11	protein_coding	glucokinase
chr11	5851814	5851940	-	5851814	5852085	A5SS	0.5	50	50	ENSMUST00000109823.9	ENSMUSG00000041798.16	Gck	chr11	protein_coding	glucokinase
chr11	5929721	5932501	-	5929721;5931114	5931070;5932501	ES	0.5	50	50	ENSMUST00000109813.9	ENSMUSG00000057897.15	Camk2b	chr11	protein_coding	calcium/calmodulin-dependent protein kinase II, beta
chr11	5931114	5932721	-	5931114;5932572	5932501;5932721	ES	0.33	50	50	ENSMUST00000109813.9	ENSMUSG00000057897.15	Camk2b	chr11	protein_coding	calcium/calmodulin-dependent protein kinase II, beta
chr11	5932758	5938101	-	5932758;5937131	5937057;5938101	ES	0.33	50	50	ENSMUST00000109813.9	ENSMUSG00000057897.15	Camk2b	chr11	protein_coding	calcium/calmodulin-dependent protein kinase II, beta
chr11	5939454	5940163	-	5939454;5939668	5939574;5940163	ES	0.33	50	50	ENSMUST00000109813.9	ENSMUSG00000057897.15	Camk2b	chr11	protein_coding	calcium/calmodulin-dependent protein kinase II, beta
chr11	5978961	6016256	-	5978961	6015474	5pMXE	0.5	50	50	ENSMUST00000109813.9	ENSMUSG00000057897.15	Camk2b	chr11	protein_coding	calcium/calmodulin-dependent protein kinase II, beta
chr11	5922888;5926893	5926765;5929673	-	5922888	5929673	cassetteExon	0.5	100	100	ENSMUST00000109813.9	ENSMUSG00000057897.15	Camk2b	chr11	protein_coding	calcium/calmodulin-dependent protein kinase II, beta
chr11	5939668;5939968	5939936;5940163	-	5939668	5940163	cassetteExon	0.5	100	100	ENSMUST00000109813.9	ENSMUSG00000057897.15	Camk2b	chr11	protein_coding	calcium/calmodulin-dependent protein kinase II, beta
chr11	5927940	5929673	-	5922888	5929673	A3SS	0.25	50	50	ENSMUST00000109813.9	ENSMUSG00000057897.15	Camk2b	chr11	protein_coding	calcium/calmodulin-dependent protein kinase II, beta
chr11	5928512	5929673	-	5922888	5929673	A3SS	0.25	50	50	ENSMUST00000109813.9	ENSMUSG00000057897.15	Camk2b	chr11	protein_coding	calcium/calmodulin-dependent protein kinase II, beta
chr11	5932761	5938101	-	5937131	5938101	A3SS&ES	0.33	50	50	ENSMUST00000109813.9	ENSMUSG00000057897.15	Camk2b	chr11	protein_coding	calcium/calmodulin-dependent protein kinase II, beta
chr11	5947948	5950205	-	5947948	5951338	A5SS	0.5	50	50	ENSMUST00000109813.9	ENSMUSG00000057897.15	Camk2b	chr11	protein_coding	calcium/calmodulin-dependent protein kinase II, beta
chr11	5932761	5938101	-	5932761	5933668	5pMXE	0.5	50	50	ENSMUST00000155755.2	ENSMUSG00000057897.15	Camk2b	chr11	protein_coding	calcium/calmodulin-dependent protein kinase II, beta
chr11	5929721	5932721	-	5929721;5932572	5932501;5932721	ES	0.33	50	50	ENSMUST00000090443.10	ENSMUSG00000057897.15	Camk2b	chr11	protein_coding	calcium/calmodulin-dependent protein kinase II, beta
chr11	5926893;5927940	5927812;5929673	-	5926893	5929673	cassetteExon	0.5	100	100	ENSMUST00000090443.10	ENSMUSG00000057897.15	Camk2b	chr11	protein_coding	calcium/calmodulin-dependent protein kinase II, beta
chr11	5929721;5931114	5931070;5932721	-	5929721;5932572	5932501;5932721	MXE	0.5	100	100	ENSMUST00000090443.10	ENSMUSG00000057897.15	Camk2b	chr11	protein_coding	calcium/calmodulin-dependent protein kinase II, beta
chr11	5928512	5929673	-	5926893	5929673	A3SS	0.25	50	50	ENSMUST00000090443.10	ENSMUSG00000057897.15	Camk2b	chr11	protein_coding	calcium/calmodulin-dependent protein kinase II, beta
chr11	5932761	5938101	-	5932758	5938101	A3SS	0.33	50	50	ENSMUST00000090443.10	ENSMUSG00000057897.15	Camk2b	chr11	protein_coding	calcium/calmodulin-dependent protein kinase II, beta
chr11	5927940;5928512	5928399;5929673	-	5927940	5929673	cassetteExon	0.5	100	100	ENSMUST00000093355.12	ENSMUSG00000057897.15	Camk2b	chr11	protein_coding	calcium/calmodulin-dependent protein kinase II, beta
chr11	5929721;5931114	5931070;5932721	-	5929721	5932721	cassetteExon	0.5	100	100	ENSMUST00000066431.14	ENSMUSG00000057897.15	Camk2b	chr11	protein_coding	calcium/calmodulin-dependent protein kinase II, beta
chr11	5939454;5939968	5939574;5940163	-	5939454	5940163	cassetteExon	0.5	100	100	ENSMUST00000154197.8	ENSMUSG00000057897.15	Camk2b	chr11	protein_coding	calcium/calmodulin-dependent protein kinase II, beta
chr11	5942892	5947883	-	5942892	5947882	A5SS	0.5	50	50	ENSMUST00000130427.8	ENSMUSG00000057897.15	Camk2b	chr11	protein_coding	calcium/calmodulin-dependent protein kinase II, beta
chr11	6063431	6100495	-	6063431;6075561	6075418;6100495	ES	0.5	50	50	ENSMUST00000066496.10	ENSMUSG00000053838.15	Nudcd3	chr11	protein_coding	NudC domain containing 3
chr11	6063431	6069334	-	6063431	6075418	A5SS	0.33	50	50	ENSMUST00000066496.10	ENSMUSG00000053838.15	Nudcd3	chr11	protein_coding	NudC domain containing 3
chr11	6063431	6100495	-	6063431	6069334	5pMXE	0.33	50	50	ENSMUST00000109805.8	ENSMUSG00000053838.15	Nudcd3	chr11	protein_coding	NudC domain containing 3
chr11	6063431	6100495	-	6075561	6100495	3pMXE	0.5	50	50	ENSMUST00000140700.2	ENSMUSG00000053838.15	Nudcd3	chr11	protein_coding	NudC domain containing 3
chr11	6216917	6217418	-	6216971	6217418	A3SS	0.5	50	50	ENSMUST00000004507.11	ENSMUSG00000004393.11	Ddx56	chr11	protein_coding	DEAD box helicase 56
chr11	6263979;6266855	6266765;6284533	+	6263979;6267080	6266978;6284533	MXE	0.5	100	100	ENSMUST00000003461.15	ENSMUSG00000020456.18	Ogdh	chr11	protein_coding	oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
chr11	6241769	6246952	+	6241693	6246952	A5SS	0.2	50	50	ENSMUST00000003461.15	ENSMUSG00000020456.18	Ogdh	chr11	protein_coding	oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
chr11	6242291	6246952	+	6241693	6246952	A5SS	0.2	50	50	ENSMUST00000003461.15	ENSMUSG00000020456.18	Ogdh	chr11	protein_coding	oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
chr11	6242513	6246952	+	6241693	6246952	A5SS	0.2	50	50	ENSMUST00000003461.15	ENSMUSG00000020456.18	Ogdh	chr11	protein_coding	oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
chr11	6242714	6246952	+	6241693	6246952	A5SS	0.2	50	50	ENSMUST00000003461.15	ENSMUSG00000020456.18	Ogdh	chr11	protein_coding	oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
chr11	6274922	6284533	+	6267080	6284533	A5SS	0.33	50	50	ENSMUST00000003461.15	ENSMUSG00000020456.18	Ogdh	chr11	protein_coding	oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
chr11	6242291	6246952	+	6241769	6246952	A5SS	0.2	50	50	ENSMUST00000101554.9	ENSMUSG00000020456.18	Ogdh	chr11	protein_coding	oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
chr11	6242513	6246952	+	6241769	6246952	A5SS	0.2	50	50	ENSMUST00000101554.9	ENSMUSG00000020456.18	Ogdh	chr11	protein_coding	oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
chr11	6242714	6246952	+	6241769	6246952	A5SS	0.2	50	50	ENSMUST00000101554.9	ENSMUSG00000020456.18	Ogdh	chr11	protein_coding	oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
chr11	6266855	6284533	+	6266855;6274922	6274878;6284533	ES	0.33	50	50	ENSMUST00000093350.10	ENSMUSG00000020456.18	Ogdh	chr11	protein_coding	oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
chr11	6263979;6267080	6266978;6284533	+	6263979;6274922	6266765;6284533	MXE	0.5	100	100	ENSMUST00000093350.10	ENSMUSG00000020456.18	Ogdh	chr11	protein_coding	oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
chr11	6242513	6246952	+	6242291	6246952	A5SS	0.2	50	50	ENSMUST00000140765.8	ENSMUSG00000020456.18	Ogdh	chr11	protein_coding	oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
chr11	6242714	6246952	+	6242291	6246952	A5SS	0.2	50	50	ENSMUST00000140765.8	ENSMUSG00000020456.18	Ogdh	chr11	protein_coding	oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
chr11	6242714	6246952	+	6242513	6246952	A5SS	0.2	50	50	ENSMUST00000135124.8	ENSMUSG00000020456.18	Ogdh	chr11	protein_coding	oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
chr11	6347686	6348556	+	6347686;6348339	6348262;6348556	ES	0.5	50	50	ENSMUST00000109787.8	ENSMUSG00000041164.16	Zmiz2	chr11	protein_coding	zinc finger, MIZ-type containing 2
chr11	6345872	6346328	+	6345872	6346232	A3SS	0.5	50	50	ENSMUST00000109787.8	ENSMUSG00000041164.16	Zmiz2	chr11	protein_coding	zinc finger, MIZ-type containing 2
chr11	6339513	6345125	+	6339140	6345125	A5SS	0.33	50	50	ENSMUST00000109787.8	ENSMUSG00000041164.16	Zmiz2	chr11	protein_coding	zinc finger, MIZ-type containing 2
chr11	6340497	6345125	+	6339140	6345125	A5SS	0.33	50	50	ENSMUST00000109787.8	ENSMUSG00000041164.16	Zmiz2	chr11	protein_coding	zinc finger, MIZ-type containing 2
chr11	6339513;6340497	6340271;6345125	+	6339513	6345125	cassetteExon	0.5	100	100	ENSMUST00000012612.11	ENSMUSG00000041164.16	Zmiz2	chr11	protein_coding	zinc finger, MIZ-type containing 2
chr11	6365984	6368101	+	6365979	6368101	A5SS	0.33	50	50	ENSMUST00000132846.2	ENSMUSG00000071866.13	Ppia	chr11	protein_coding	peptidylprolyl isomerase A
chr11	6367141	6368101	+	6365979	6368101	A5SS	0.33	50	50	ENSMUST00000132846.2	ENSMUSG00000071866.13	Ppia	chr11	protein_coding	peptidylprolyl isomerase A
chr11	6367141	6368101	+	6365984	6368101	A5SS	0.33	50	50	ENSMUST00000090749.13	ENSMUSG00000071866.13	Ppia	chr11	protein_coding	peptidylprolyl isomerase A
chr11	6379225	6389376	-	6379225;6383837	6383724;6389376	ES	0.5	50	50	ENSMUST00000109737.9	ENSMUSG00000041126.17	H2az2	chr11	protein_coding	H2A.Z histone variant 2
chr11	6425709	6440804	+	6425709;6435734	6435667;6440804	ES	0.5	50	50	ENSMUST00000127488.2	ENSMUSG00000086839.8	Gm11973	chr11	lncRNA	predicted gene 11973
chr11	6425709	6435667	+	6425709	6443114	A3SS	0.33	50	50	ENSMUST00000124274.2	ENSMUSG00000086839.8	Gm11973	chr11	lncRNA	predicted gene 11973
chr11	6425709	6440804	+	6425709	6443114	A3SS	0.33	50	50	ENSMUST00000124274.2	ENSMUSG00000086839.8	Gm11973	chr11	lncRNA	predicted gene 11973
chr11	6441851	6443114	+	6425709	6443114	A5SS	0.5	50	50	ENSMUST00000124274.2	ENSMUSG00000086839.8	Gm11973	chr11	lncRNA	predicted gene 11973
chr11	6468827	6470742	-	6468827;6469187	6468979;6470742	ES	0.33	50	50	ENSMUST00000003459.4	ENSMUSG00000020437.13	Myo1g	chr11	protein_coding	myosin IG
chr11	6469123	6470742	-	6469187	6470742	A3SS	0.33	50	50	ENSMUST00000003459.4	ENSMUSG00000020437.13	Myo1g	chr11	protein_coding	myosin IG
chr11	6469187	6469309	-	6469187	6470742	A5SS	0.5	50	50	ENSMUST00000003459.4	ENSMUSG00000020437.13	Myo1g	chr11	protein_coding	myosin IG
chr11	6468827;6469123	6468979;6470742	-	6468827	6470742	cassetteExon	0.5	100	100	ENSMUST00000144725.8	ENSMUSG00000020437.13	Myo1g	chr11	protein_coding	myosin IG
chr11	6497029	6534520	+	6497029;6520137	6519964;6534520	ES	0.33	50	50	ENSMUST00000000388.15	ENSMUSG00000000378.16	Ccm2	chr11	protein_coding	cerebral cavernous malformation 2
chr11	6520137	6535034	+	6520137;6534603	6534520;6535034	ES	0.5	50	50	ENSMUST00000000388.15	ENSMUSG00000000378.16	Ccm2	chr11	protein_coding	cerebral cavernous malformation 2
chr11	6535217	6540753	+	6535217;6539568	6539432;6540753	ES	0.5	50	50	ENSMUST00000000388.15	ENSMUSG00000000378.16	Ccm2	chr11	protein_coding	cerebral cavernous malformation 2
chr11	6511241	6519964	+	6497029	6519964	A5SS	0.5	50	50	ENSMUST00000000388.15	ENSMUSG00000000378.16	Ccm2	chr11	protein_coding	cerebral cavernous malformation 2
chr11	6511241	6534520	+	6520137	6534520	A5SS&ES	0.33	50	50	ENSMUST00000000388.15	ENSMUSG00000000378.16	Ccm2	chr11	protein_coding	cerebral cavernous malformation 2
chr11	6535217	6540753	+	6535217	6539432	3pMXE	0.5	50	50	ENSMUST00000159007.8	ENSMUSG00000000378.16	Ccm2	chr11	protein_coding	cerebral cavernous malformation 2
chr11	6497029;6520137	6519964;6535034	+	6497029;6534603	6534520;6535034	MXE	0.5	100	100	ENSMUST00000159007.8	ENSMUSG00000000378.16	Ccm2	chr11	protein_coding	cerebral cavernous malformation 2
chr11	6511241	6534520	+	6497029	6534520	A5SS	0.33	50	50	ENSMUST00000159007.8	ENSMUSG00000000378.16	Ccm2	chr11	protein_coding	cerebral cavernous malformation 2
chr11	6511241;6520137	6519964;6534520	+	6511241	6534520	cassetteExon	0.5	100	100	ENSMUST00000109722.9	ENSMUSG00000000378.16	Ccm2	chr11	protein_coding	cerebral cavernous malformation 2
chr11	6511241;6520137	6519964;6535034	+	6511241;6534603	6534520;6535034	MXE	0.5	100	100	ENSMUST00000109722.9	ENSMUSG00000000378.16	Ccm2	chr11	protein_coding	cerebral cavernous malformation 2
chr11	6511241	6511892	+	6511241	6534520	A3SS	0.33	50	50	ENSMUST00000109722.9	ENSMUSG00000000378.16	Ccm2	chr11	protein_coding	cerebral cavernous malformation 2
chr11	6511241	6511892	+	6511241	6519964	A3SS	0.33	50	50	ENSMUST00000161501.8	ENSMUSG00000000378.16	Ccm2	chr11	protein_coding	cerebral cavernous malformation 2
chr11	6548952	6549376	-	6548952;6549235	6549036;6549376	ES	0.5	50	50	ENSMUST00000045713.4	ENSMUSG00000041073.11	Nacad	chr11	protein_coding	NAC alpha domain containing
chr11	6548952	6549080	-	6548952	6549036	A5SS	0.33	50	50	ENSMUST00000045713.4	ENSMUSG00000041073.11	Nacad	chr11	protein_coding	NAC alpha domain containing
chr11	6548952;6549235	6549080;6549376	-	6548952	6549376	cassetteExon	0.5	100	100	ENSMUST00000177050.8	ENSMUSG00000041073.11	Nacad	chr11	protein_coding	NAC alpha domain containing
chr11	6569063	6569556	-	6569110	6569556	A3SS	0.5	50	50	ENSMUST00000156969.8	ENSMUSG00000000384.16	Tbrg4	chr11	protein_coding	transforming growth factor beta regulated gene 4
chr11	6570221	6570742	-	6570143	6570742	A3SS	0.33	50	50	ENSMUST00000156969.8	ENSMUSG00000000384.16	Tbrg4	chr11	protein_coding	transforming growth factor beta regulated gene 4
chr11	6570235	6570742	-	6570143	6570742	A3SS	0.33	50	50	ENSMUST00000156969.8	ENSMUSG00000000384.16	Tbrg4	chr11	protein_coding	transforming growth factor beta regulated gene 4
chr11	6573461	6573816	-	6571065	6573816	A3SS	0.5	50	50	ENSMUST00000156969.8	ENSMUSG00000000384.16	Tbrg4	chr11	protein_coding	transforming growth factor beta regulated gene 4
chr11	6575213	6575384	-	6575213	6575965	A5SS	0.33	50	50	ENSMUST00000156969.8	ENSMUSG00000000384.16	Tbrg4	chr11	protein_coding	transforming growth factor beta regulated gene 4
chr11	6575213	6576023	-	6575213	6575965	A5SS	0.33	50	50	ENSMUST00000156969.8	ENSMUSG00000000384.16	Tbrg4	chr11	protein_coding	transforming growth factor beta regulated gene 4
chr11	6570235	6570742	-	6570221	6570742	A3SS	0.33	50	50	ENSMUST00000131477.2	ENSMUSG00000000384.16	Tbrg4	chr11	protein_coding	transforming growth factor beta regulated gene 4
chr11	6575213	6575384	-	6575213	6576023	A5SS	0.33	50	50	ENSMUST00000136682.8	ENSMUSG00000000384.16	Tbrg4	chr11	protein_coding	transforming growth factor beta regulated gene 4
chr11	6608617	6610084	-	6609645	6610084	A3SS&ES	0.5	50	50	ENSMUST00000127510.9	ENSMUSG00000086373.9	Gm11978	chr11	transcribed_processed_pseudogene	predicted gene 11978
chr11	6608627;6614347	6614201;6624763	+	6608627	6624763	cassetteExon	0.5	100	100	ENSMUST00000045374.8	ENSMUSG00000041046.8	Ramp3	chr11	protein_coding	receptor (calcitonin) activity modifying protein 3
chr11	7115526;7116289	7116240;7117064	+	7115526	7117064	cassetteExon	0.5	100	100	ENSMUST00000020706.5	ENSMUSG00000020431.6	Adcy1	chr11	protein_coding	adenylate cyclase 1
chr11	8565851	8614479	-	8565851	8574417	5pMXE	0.5	50	50	ENSMUST00000239091.2	ENSMUSG00000020422.15	Tns3	chr11	protein_coding	tensin 3
chr11	8487800	8488003	-	8482509	8488003	A3SS	0.5	50	50	ENSMUST00000239091.2	ENSMUSG00000020422.15	Tns3	chr11	protein_coding	tensin 3
chr11	8403250	8418427	-	8403250	8428225	A5SS	0.5	50	50	ENSMUST00000239091.2	ENSMUSG00000020422.15	Tns3	chr11	protein_coding	tensin 3
chr11	8799759	8805563	-	8799759;8804577	8804343;8805563	ES	0.5	50	50	ENSMUST00000154153.8	ENSMUSG00000046634.13	Pkd1l1	chr11	protein_coding	polycystic kidney disease 1 like 1
chr11	8960417	8961059	-	8960417;8960624	8960497;8961059	ES	0.5	50	50	ENSMUST00000129115.2	ENSMUSG00000020413.12	Hus1	chr11	protein_coding	HUS1 checkpoint clamp component
chr11	8960417	8961059	-	8960417	8960497	A5SS	0.5	50	50	ENSMUST00000152890.8	ENSMUSG00000020413.12	Hus1	chr11	protein_coding	HUS1 checkpoint clamp component
chr11	8981538	8988257	-	8981538	8998869	A5SS	0.5	50	50	ENSMUST00000102909.8	ENSMUSG00000040985.14	Sun3	chr11	protein_coding	Sad1 and UNC84 domain containing 3
chr11	9068284;9068660	9068631;9069374	+	9068284	9069374	cassetteExon	0.5	100	100	ENSMUST00000020677.8	ENSMUSG00000020407.14	Upp1	chr11	protein_coding	uridine phosphorylase 1
chr11	9068284;9068867	9068631;9069374	+	9068284	9069374	cassetteExon	0.5	100	100	ENSMUST00000020677.8	ENSMUSG00000020407.14	Upp1	chr11	protein_coding	uridine phosphorylase 1
chr11	9068162	9069374	+	9068284	9069374	A5SS	0.25	50	50	ENSMUST00000020677.8	ENSMUSG00000020407.14	Upp1	chr11	protein_coding	uridine phosphorylase 1
chr11	9081782	9083234	+	9081788	9083234	A5SS	0.5	50	50	ENSMUST00000020677.8	ENSMUSG00000020407.14	Upp1	chr11	protein_coding	uridine phosphorylase 1
chr11	9068660	9069374	+	9068162	9069374	A5SS	0.25	50	50	ENSMUST00000101525.9	ENSMUSG00000020407.14	Upp1	chr11	protein_coding	uridine phosphorylase 1
chr11	9068867	9069374	+	9068162	9069374	A5SS	0.25	50	50	ENSMUST00000101525.9	ENSMUSG00000020407.14	Upp1	chr11	protein_coding	uridine phosphorylase 1
chr11	9068867	9069374	+	9068660	9069374	A5SS	0.33	50	50	ENSMUST00000170444.8	ENSMUSG00000020407.14	Upp1	chr11	protein_coding	uridine phosphorylase 1
chr11	9068284	9069374	+	9068660	9069374	5pMXE	0.25	50	50	ENSMUST00000164791.8	ENSMUSG00000020407.14	Upp1	chr11	protein_coding	uridine phosphorylase 1
chr11	9068284	9069374	+	9068867	9069374	5pMXE	0.25	50	50	ENSMUST00000172452.8	ENSMUSG00000020407.14	Upp1	chr11	protein_coding	uridine phosphorylase 1
chr11	9143531	9166158	+	9142034	9166158	A5SS	0.5	50	50	ENSMUST00000141233.2	ENSMUSG00000004668.15	Abca13	chr11	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 13
chr11	11066606	11080909	+	11066606	11104163	A3SS	0.5	50	50	ENSMUST00000109681.8	ENSMUSG00000050830.18	Vwc2	chr11	protein_coding	von Willebrand factor C domain containing 2
chr11	11064772	11065811	+	11064509	11065811	A5SS	0.5	50	50	ENSMUST00000109681.8	ENSMUSG00000050830.18	Vwc2	chr11	protein_coding	von Willebrand factor C domain containing 2
chr11	11427194	11437671	+	11412316	11437671	A5SS	0.5	50	50	ENSMUST00000170661.2	ENSMUSG00000020191.12	Spata48	chr11	protein_coding	spermatogenesis associated 48
chr11	11439478	11440221	+	11438646	11440221	A5SS	0.5	50	50	ENSMUST00000020410.11	ENSMUSG00000020191.12	Spata48	chr11	protein_coding	spermatogenesis associated 48
chr11	11573924	11574643	-	11540119	11574643	A3SS	0.5	50	50	ENSMUST00000081896.5	ENSMUSG00000062511.7	4930512M02Rik	chr11	protein_coding	RIKEN cDNA 4930512M02 gene
chr11	11635197	11650205	+	11635174	11650205	A5SS	0.33	50	50	ENSMUST00000141436.8	ENSMUSG00000018654.18	Ikzf1	chr11	protein_coding	IKAROS family zinc finger 1
chr11	11636468	11650205	+	11635174	11650205	A5SS	0.33	50	50	ENSMUST00000141436.8	ENSMUSG00000018654.18	Ikzf1	chr11	protein_coding	IKAROS family zinc finger 1
chr11	11657904;11698571	11698311;11704007	+	11657904	11704007	cassetteExon	0.5	100	100	ENSMUST00000126058.8	ENSMUSG00000018654.18	Ikzf1	chr11	protein_coding	IKAROS family zinc finger 1
chr11	11657904	11690950	+	11657904	11704007	A3SS	0.33	50	50	ENSMUST00000126058.8	ENSMUSG00000018654.18	Ikzf1	chr11	protein_coding	IKAROS family zinc finger 1
chr11	11636468	11650205	+	11635197	11650205	A5SS	0.33	50	50	ENSMUST00000126058.8	ENSMUSG00000018654.18	Ikzf1	chr11	protein_coding	IKAROS family zinc finger 1
chr11	11657904	11698311	+	11657904;11691009	11690950;11698311	ES	0.5	50	50	ENSMUST00000065433.12	ENSMUSG00000018654.18	Ikzf1	chr11	protein_coding	IKAROS family zinc finger 1
chr11	11753063	11758895	-	11753063;11756215	11756096;11758895	ES	0.5	50	50	ENSMUST00000152345.8	ENSMUSG00000035455.13	Fignl1	chr11	protein_coding	fidgetin-like 1
chr11	11739158	11751299	-	11739158	11752851	A5SS	0.5	50	50	ENSMUST00000152345.8	ENSMUSG00000035455.13	Fignl1	chr11	protein_coding	fidgetin-like 1
chr11	11753063	11755959	-	11753063	11756096	A5SS	0.33	50	50	ENSMUST00000152345.8	ENSMUSG00000035455.13	Fignl1	chr11	protein_coding	fidgetin-like 1
chr11	11756215	11758885	-	11756215	11758895	A5SS	0.5	50	50	ENSMUST00000152345.8	ENSMUSG00000035455.13	Fignl1	chr11	protein_coding	fidgetin-like 1
chr11	11753063;11756215	11755959;11758895	-	11753063	11758895	cassetteExon	0.5	100	100	ENSMUST00000171080.8	ENSMUSG00000035455.13	Fignl1	chr11	protein_coding	fidgetin-like 1
chr11	11753063	11758895	-	11753063	11756096	A5SS&ES	0.33	50	50	ENSMUST00000171938.2	ENSMUSG00000035455.13	Fignl1	chr11	protein_coding	fidgetin-like 1
chr11	11795450	11796636	-	11789492	11796636	A3SS	0.5	50	50	ENSMUST00000066237.10	ENSMUSG00000020182.17	Ddc	chr11	protein_coding	dopa decarboxylase
chr11	11812493	11813651	-	11796702	11813651	A3SS	0.5	50	50	ENSMUST00000066237.10	ENSMUSG00000020182.17	Ddc	chr11	protein_coding	dopa decarboxylase
chr11	11823775	11826245	-	11823253	11826245	A3SS	0.33	50	50	ENSMUST00000066237.10	ENSMUSG00000020182.17	Ddc	chr11	protein_coding	dopa decarboxylase
chr11	11825592	11826245	-	11823253	11826245	A3SS	0.33	50	50	ENSMUST00000066237.10	ENSMUSG00000020182.17	Ddc	chr11	protein_coding	dopa decarboxylase
chr11	11772293	11772792	-	11772293	11774849	A5SS	0.5	50	50	ENSMUST00000066237.10	ENSMUSG00000020182.17	Ddc	chr11	protein_coding	dopa decarboxylase
chr11	11785809	11785926	-	11785809	11789398	A5SS	0.5	50	50	ENSMUST00000066237.10	ENSMUSG00000020182.17	Ddc	chr11	protein_coding	dopa decarboxylase
chr11	11830650	11840338	-	11830650	11848008	A5SS	0.33	50	50	ENSMUST00000066237.10	ENSMUSG00000020182.17	Ddc	chr11	protein_coding	dopa decarboxylase
chr11	11830650	11848012	-	11830650	11848008	A5SS	0.33	50	50	ENSMUST00000066237.10	ENSMUSG00000020182.17	Ddc	chr11	protein_coding	dopa decarboxylase
chr11	11830650	11840338	-	11830650	11848012	A5SS	0.33	50	50	ENSMUST00000178704.8	ENSMUSG00000020182.17	Ddc	chr11	protein_coding	dopa decarboxylase
chr11	11825592	11826245	-	11823775	11826245	A3SS	0.33	50	50	ENSMUST00000145033.8	ENSMUSG00000020182.17	Ddc	chr11	protein_coding	dopa decarboxylase
chr11	11894926	11895964	-	11894926;11895632	11895495;11895964	ES	0.5	50	50	ENSMUST00000109654.8	ENSMUSG00000020176.18	Grb10	chr11	protein_coding	growth factor receptor bound protein 10
chr11	11937674	11987192	-	11937674	11977903	5pMXE	0.2	50	50	ENSMUST00000109654.8	ENSMUSG00000020176.18	Grb10	chr11	protein_coding	growth factor receptor bound protein 10
chr11	11937674	11988541	-	11937674	11977903	5pMXE	0.2	50	50	ENSMUST00000109654.8	ENSMUSG00000020176.18	Grb10	chr11	protein_coding	growth factor receptor bound protein 10
chr11	11901659;11904908	11904744;11917532	-	11901659	11917532	cassetteExon	0.5	100	100	ENSMUST00000109654.8	ENSMUSG00000020176.18	Grb10	chr11	protein_coding	growth factor receptor bound protein 10
chr11	11896032	11896224	-	11896032	11896687	A5SS	0.5	50	50	ENSMUST00000109654.8	ENSMUSG00000020176.18	Grb10	chr11	protein_coding	growth factor receptor bound protein 10
chr11	11937674	11975838	-	11937674	11977903	A5SS	0.2	50	50	ENSMUST00000109654.8	ENSMUSG00000020176.18	Grb10	chr11	protein_coding	growth factor receptor bound protein 10
chr11	11937674	11976662	-	11937674	11977903	A5SS	0.2	50	50	ENSMUST00000109654.8	ENSMUSG00000020176.18	Grb10	chr11	protein_coding	growth factor receptor bound protein 10
chr11	11937674	11988541	-	11937674	11987192	5pMXE	0.2	50	50	ENSMUST00000093321.12	ENSMUSG00000020176.18	Grb10	chr11	protein_coding	growth factor receptor bound protein 10
chr11	11937674	11975838	-	11937674	11987192	A5SS	0.2	50	50	ENSMUST00000093321.12	ENSMUSG00000020176.18	Grb10	chr11	protein_coding	growth factor receptor bound protein 10
chr11	11937674	11976662	-	11937674	11987192	A5SS	0.2	50	50	ENSMUST00000093321.12	ENSMUSG00000020176.18	Grb10	chr11	protein_coding	growth factor receptor bound protein 10
chr11	11901659	11917532	-	11901659	11904744	5pMXE	0.5	50	50	ENSMUST00000142877.2	ENSMUSG00000020176.18	Grb10	chr11	protein_coding	growth factor receptor bound protein 10
chr11	11901659	11917532	-	11904908	11917532	3pMXE	0.5	50	50	ENSMUST00000143386.8	ENSMUSG00000020176.18	Grb10	chr11	protein_coding	growth factor receptor bound protein 10
chr11	11937674	11975838	-	11937674	11988541	A5SS	0.2	50	50	ENSMUST00000143386.8	ENSMUSG00000020176.18	Grb10	chr11	protein_coding	growth factor receptor bound protein 10
chr11	11937674	11976662	-	11937674	11988541	A5SS	0.2	50	50	ENSMUST00000143386.8	ENSMUSG00000020176.18	Grb10	chr11	protein_coding	growth factor receptor bound protein 10
chr11	11937674	11976662	-	11937674	11975838	5pMXE	0.2	50	50	ENSMUST00000150972.8	ENSMUSG00000020176.18	Grb10	chr11	protein_coding	growth factor receptor bound protein 10
chr11	12293917	12319594	-	12293917;12315179	12315105;12319594	ES	0.5	50	50	ENSMUST00000172919.8	ENSMUSG00000020173.18	Cobl	chr11	protein_coding	cordon-bleu WH2 repeat
chr11	12319691;12323373	12323329;12325810	-	12319691	12325810	cassetteExon	0.5	100	100	ENSMUST00000172919.8	ENSMUSG00000020173.18	Cobl	chr11	protein_coding	cordon-bleu WH2 repeat
chr11	12259752	12293744	-	12188059	12293744	A3SS	0.5	50	50	ENSMUST00000172919.8	ENSMUSG00000020173.18	Cobl	chr11	protein_coding	cordon-bleu WH2 repeat
chr11	12188059	12199650	-	12188059	12293744	A5SS	0.5	50	50	ENSMUST00000172919.8	ENSMUSG00000020173.18	Cobl	chr11	protein_coding	cordon-bleu WH2 repeat
chr11	12336766	12362031	-	12336766	12414682	A5SS	0.5	50	50	ENSMUST00000172919.8	ENSMUSG00000020173.18	Cobl	chr11	protein_coding	cordon-bleu WH2 repeat
chr11	12206242	12259614	-	12206242;12217144	12216856;12259614	ES	0.25	50	50	ENSMUST00000109650.8	ENSMUSG00000020173.18	Cobl	chr11	protein_coding	cordon-bleu WH2 repeat
chr11	12217144;12257128	12256958;12259614	-	12217144	12259614	cassetteExon	0.5	100	100	ENSMUST00000109650.8	ENSMUSG00000020173.18	Cobl	chr11	protein_coding	cordon-bleu WH2 repeat
chr11	12246567	12259614	-	12217144	12259614	A3SS	0.25	50	50	ENSMUST00000109650.8	ENSMUSG00000020173.18	Cobl	chr11	protein_coding	cordon-bleu WH2 repeat
chr11	12246567	12259614	-	12257128	12259614	A3SS&ES	0.25	50	50	ENSMUST00000046755.14	ENSMUSG00000020173.18	Cobl	chr11	protein_coding	cordon-bleu WH2 repeat
chr11	12246567	12259614	-	12206242	12259614	A3SS	0.25	50	50	ENSMUST00000172956.8	ENSMUSG00000020173.18	Cobl	chr11	protein_coding	cordon-bleu WH2 repeat
chr11	12257128	12259614	-	12206242	12259614	A3SS	0.25	50	50	ENSMUST00000172956.8	ENSMUSG00000020173.18	Cobl	chr11	protein_coding	cordon-bleu WH2 repeat
chr11	12206242	12259614	-	12217144	12259614	3pMXE	0.25	50	50	ENSMUST00000172827.8	ENSMUSG00000020173.18	Cobl	chr11	protein_coding	cordon-bleu WH2 repeat
chr11	12217144	12259614	-	12257128	12259614	3pMXE	0.25	50	50	ENSMUST00000130572.2	ENSMUSG00000020173.18	Cobl	chr11	protein_coding	cordon-bleu WH2 repeat
chr11	12271247	12285751	+	12271247;12272325	12272252;12285751	ES	0.5	50	50	ENSMUST00000153794.9	ENSMUSG00000086584.9	Gm12002	chr11	lncRNA	predicted gene 12002
chr11	12272325	12296056	+	12272325	12285751	3pMXE	0.5	50	50	ENSMUST00000153794.9	ENSMUSG00000086584.9	Gm12002	chr11	lncRNA	predicted gene 12002
chr11	12270429;12270736	12270655;12271144	+	12270429	12271144	cassetteExon	0.5	100	100	ENSMUST00000153794.9	ENSMUSG00000086584.9	Gm12002	chr11	lncRNA	predicted gene 12002
chr11	16213250	16318217	+	16213250	16231841	3pMXE	0.25	50	50	ENSMUST00000109645.9	ENSMUSG00000048834.17	Vstm2a	chr11	protein_coding	V-set and transmembrane domain containing 2A
chr11	16213250	16231703	+	16213250	16231841	A3SS	0.25	50	50	ENSMUST00000109645.9	ENSMUSG00000048834.17	Vstm2a	chr11	protein_coding	V-set and transmembrane domain containing 2A
chr11	16213250	16231963	+	16213250	16231841	A3SS	0.25	50	50	ENSMUST00000109645.9	ENSMUSG00000048834.17	Vstm2a	chr11	protein_coding	V-set and transmembrane domain containing 2A
chr11	16210682	16211438	+	16210021	16211438	A5SS	0.5	50	50	ENSMUST00000109645.9	ENSMUSG00000048834.17	Vstm2a	chr11	protein_coding	V-set and transmembrane domain containing 2A
chr11	16213250	16231703	+	16213250	16318217	A3SS	0.25	50	50	ENSMUST00000109647.3	ENSMUSG00000048834.17	Vstm2a	chr11	protein_coding	V-set and transmembrane domain containing 2A
chr11	16213250	16231963	+	16213250	16318217	A3SS	0.25	50	50	ENSMUST00000109647.3	ENSMUSG00000048834.17	Vstm2a	chr11	protein_coding	V-set and transmembrane domain containing 2A
chr11	16213250	16231703	+	16213250	16231963	A3SS	0.25	50	50	ENSMUST00000208926.2	ENSMUSG00000048834.17	Vstm2a	chr11	protein_coding	V-set and transmembrane domain containing 2A
chr11	16456472	16457980	-	16456472	16458104	A5SS	0.25	50	50	ENSMUST00000109643.8	ENSMUSG00000078974.11	Sec61g	chr11	protein_coding	SEC61, gamma subunit
chr11	16456472	16458079	-	16456472	16458104	A5SS	0.25	50	50	ENSMUST00000109643.8	ENSMUSG00000078974.11	Sec61g	chr11	protein_coding	SEC61, gamma subunit
chr11	16456472	16458100	-	16456472	16458104	A5SS	0.25	50	50	ENSMUST00000109643.8	ENSMUSG00000078974.11	Sec61g	chr11	protein_coding	SEC61, gamma subunit
chr11	16456472	16457980	-	16456472	16458100	A5SS	0.25	50	50	ENSMUST00000109642.8	ENSMUSG00000078974.11	Sec61g	chr11	protein_coding	SEC61, gamma subunit
chr11	16456472	16458079	-	16456472	16458100	A5SS	0.25	50	50	ENSMUST00000109642.8	ENSMUSG00000078974.11	Sec61g	chr11	protein_coding	SEC61, gamma subunit
chr11	16456472	16457980	-	16456472	16458079	A5SS	0.25	50	50	ENSMUST00000178855.8	ENSMUSG00000078974.11	Sec61g	chr11	protein_coding	SEC61, gamma subunit
chr11	16702570	16743640	+	16702570	16808896	A3SS	0.5	50	50	ENSMUST00000102884.10	ENSMUSG00000020122.17	Egfr	chr11	protein_coding	epidermal growth factor receptor
chr11	16833613	16834254	+	16833613	16837141	A3SS	0.5	50	50	ENSMUST00000102884.10	ENSMUSG00000020122.17	Egfr	chr11	protein_coding	epidermal growth factor receptor
chr11	16886564;16887484	16887373;16900882	-	16886564	16900882	cassetteExon	0.5	100	100	ENSMUST00000130392.8	ENSMUSG00000087060.8	Eldr	chr11	lncRNA	Egfr long non-coding downstream RNA
chr11	16888625	16900882	-	16886564	16900882	A3SS	0.25	50	50	ENSMUST00000130392.8	ENSMUSG00000087060.8	Eldr	chr11	lncRNA	Egfr long non-coding downstream RNA
chr11	16889647	16900882	-	16886564	16900882	A3SS	0.25	50	50	ENSMUST00000130392.8	ENSMUSG00000087060.8	Eldr	chr11	lncRNA	Egfr long non-coding downstream RNA
chr11	16900930	16901003	-	16900930	16901020	A5SS	0.5	50	50	ENSMUST00000130392.8	ENSMUSG00000087060.8	Eldr	chr11	lncRNA	Egfr long non-coding downstream RNA
chr11	16885926	16886455	-	16885841	16886455	A3SS	0.5	50	50	ENSMUST00000139493.8	ENSMUSG00000087060.8	Eldr	chr11	lncRNA	Egfr long non-coding downstream RNA
chr11	16887484;16888625	16888585;16900882	-	16887484	16900882	cassetteExon	0.5	100	100	ENSMUST00000136053.8	ENSMUSG00000087060.8	Eldr	chr11	lncRNA	Egfr long non-coding downstream RNA
chr11	16889647	16900882	-	16887484	16900882	A3SS	0.25	50	50	ENSMUST00000136053.8	ENSMUSG00000087060.8	Eldr	chr11	lncRNA	Egfr long non-coding downstream RNA
chr11	16889647	16900882	-	16888625	16900882	A3SS	0.25	50	50	ENSMUST00000139271.2	ENSMUSG00000087060.8	Eldr	chr11	lncRNA	Egfr long non-coding downstream RNA
chr11	16945355	17002183	-	16945355	16958557	5pMXE	0.33	50	50	ENSMUST00000102881.10	ENSMUSG00000020120.16	Plek	chr11	protein_coding	pleckstrin
chr11	16945355	16952814	-	16945355	16958557	A5SS	0.33	50	50	ENSMUST00000102881.10	ENSMUSG00000020120.16	Plek	chr11	protein_coding	pleckstrin
chr11	16945355	16952814	-	16945355	17002183	A5SS	0.33	50	50	ENSMUST00000020321.13	ENSMUSG00000020120.16	Plek	chr11	protein_coding	pleckstrin
chr11	17144853	17161422	+	17144853	17148259	3pMXE	0.5	50	50	ENSMUST00000102880.5	ENSMUSG00000033953.11	Ppp3r1	chr11	protein_coding	protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)
chr11	17178275	17179769	+	17178252	17179769	A5SS	0.5	50	50	ENSMUST00000151431.2	ENSMUSG00000078970.6	Wdr92	chr11	protein_coding	WD repeat domain 92
chr11	17208007	17212648	+	17207658	17212648	A5SS	0.5	50	50	ENSMUST00000131227.2	ENSMUSG00000000581.9	C1d	chr11	protein_coding	C1D nuclear receptor co-repressor
chr11	17904085	17904793	+	17904085	17906633	A3SS	0.5	50	50	ENSMUST00000140161.2	ENSMUSG00000086468.2	Etaa1os	chr11	lncRNA	Ewing tumor-associated antigen 1, opposite strand
chr11	18804405	18809950	-	18797354	18809950	A3SS	0.5	50	50	ENSMUST00000128654.2	ENSMUSG00000085743.2	8430419K02Rik	chr11	lncRNA	RIKEN cDNA 8430419K02 gene
chr11	18804405	18818549	-	18804405	18809950	5pMXE	0.5	50	50	ENSMUST00000156831.2	ENSMUSG00000085743.2	8430419K02Rik	chr11	lncRNA	RIKEN cDNA 8430419K02 gene
chr11	18855765	18938268	-	18855765;18891804	18891659;18938268	ES	0.5	50	50	ENSMUST00000144988.8	ENSMUSG00000020160.19	Meis1	chr11	protein_coding	Meis homeobox 1
chr11	18963682	18966133	-	18963682;18964391	18964250;18966133	ES	0.5	50	50	ENSMUST00000144988.8	ENSMUSG00000020160.19	Meis1	chr11	protein_coding	Meis homeobox 1
chr11	18961388	18961976	-	18961388	18962810	A5SS	0.5	50	50	ENSMUST00000144988.8	ENSMUSG00000020160.19	Meis1	chr11	protein_coding	Meis homeobox 1
chr11	18831922;18834082	18833988;18834387	-	18831922	18834387	cassetteExon	0.5	100	100	ENSMUST00000102878.11	ENSMUSG00000020160.19	Meis1	chr11	protein_coding	Meis homeobox 1
chr11	18834476	18835512	-	18834476	18835589	A5SS	0.33	50	50	ENSMUST00000102878.11	ENSMUSG00000020160.19	Meis1	chr11	protein_coding	Meis homeobox 1
chr11	18834476	18835593	-	18834476	18835589	A5SS	0.33	50	50	ENSMUST00000102878.11	ENSMUSG00000020160.19	Meis1	chr11	protein_coding	Meis homeobox 1
chr11	18834476	18835512	-	18834476	18835593	A5SS	0.33	50	50	ENSMUST00000185131.8	ENSMUSG00000020160.19	Meis1	chr11	protein_coding	Meis homeobox 1
chr11	18959352	18960288	+	18959291	18960288	A5SS	0.5	50	50	ENSMUST00000117191.2	ENSMUSG00000084085.3	Gm16140	chr11	lncRNA	predicted gene 16140
chr11	19948297	19955782	+	19948297;19951089	19951009;19955782	ES	0.5	50	50	ENSMUST00000093299.13	ENSMUSG00000045671.18	Spred2	chr11	protein_coding	sprouty-related EVH1 domain containing 2
chr11	19904739	19948120	+	19874956	19948120	A5SS	0.5	50	50	ENSMUST00000093299.13	ENSMUSG00000045671.18	Spred2	chr11	protein_coding	sprouty-related EVH1 domain containing 2
chr11	20165702;20168908	20168813;20174648	+	20165702;20174498	20174367;20174648	MXE	0.5	100	100	ENSMUST00000109602.8	ENSMUSG00000020149.18	Rab1a	chr11	protein_coding	RAB1A, member RAS oncogene family
chr11	20173179	20174367	+	20165702	20174367	A5SS	0.5	50	50	ENSMUST00000109602.8	ENSMUSG00000020149.18	Rab1a	chr11	protein_coding	RAB1A, member RAS oncogene family
chr11	20165702	20174367	+	20165702	20168813	3pMXE	0.5	50	50	ENSMUST00000132285.8	ENSMUSG00000020149.18	Rab1a	chr11	protein_coding	RAB1A, member RAS oncogene family
chr11	20168908	20173084	+	20168908	20174648	A3SS	0.5	50	50	ENSMUST00000109601.8	ENSMUSG00000020149.18	Rab1a	chr11	protein_coding	RAB1A, member RAS oncogene family
chr11	20493760	20545130	+	20493760	20597802	A3SS	0.5	50	50	ENSMUST00000093292.11	ENSMUSG00000049800.14	Sertad2	chr11	protein_coding	SERTA domain containing 2
chr11	20582273	20597802	+	20493760	20597802	A5SS	0.33	50	50	ENSMUST00000093292.11	ENSMUSG00000049800.14	Sertad2	chr11	protein_coding	SERTA domain containing 2
chr11	20597352	20597802	+	20493760	20597802	A5SS	0.33	50	50	ENSMUST00000093292.11	ENSMUSG00000049800.14	Sertad2	chr11	protein_coding	SERTA domain containing 2
chr11	20597352	20597802	+	20582273	20597802	A5SS	0.33	50	50	ENSMUST00000109586.3	ENSMUSG00000049800.14	Sertad2	chr11	protein_coding	SERTA domain containing 2
chr11	20642588	20648313	-	20642588;20646831	20646751;20648313	ES	0.33	50	50	ENSMUST00000146722.9	ENSMUSG00000049659.16	Aftph	chr11	protein_coding	aftiphilin
chr11	20636198	20648313	-	20636198;20642588	20642465;20648313	ES	0.33	50	50	ENSMUST00000035350.12	ENSMUSG00000049659.16	Aftph	chr11	protein_coding	aftiphilin
chr11	20636198	20648313	-	20636198	20642465	A5SS&ES	0.5	50	50	ENSMUST00000177014.8	ENSMUSG00000049659.16	Aftph	chr11	protein_coding	aftiphilin
chr11	20642588	20648313	-	20642588	20646751	A5SS	0.5	50	50	ENSMUST00000177014.8	ENSMUSG00000049659.16	Aftph	chr11	protein_coding	aftiphilin
chr11	20646831	20648313	-	20636198	20648313	A3SS	0.33	50	50	ENSMUST00000177543.8	ENSMUSG00000049659.16	Aftph	chr11	protein_coding	aftiphilin
chr11	20662315	20675685	-	20653833	20675685	A3SS	0.5	50	50	ENSMUST00000176782.2	ENSMUSG00000049659.16	Aftph	chr11	protein_coding	aftiphilin
chr11	20653833	20658681	-	20653833	20675685	A5SS	0.5	50	50	ENSMUST00000176782.2	ENSMUSG00000049659.16	Aftph	chr11	protein_coding	aftiphilin
chr11	20780347	20780870	-	20780347	20780974	A5SS	0.5	50	50	ENSMUST00000047028.9	ENSMUSG00000042363.15	Lgalsl	chr11	protein_coding	lectin, galactoside binding-like
chr11	21042369	21086046	+	21041678	21086046	A5SS	0.5	50	50	ENSMUST00000156122.8	ENSMUSG00000020134.14	Peli1	chr11	protein_coding	pellino 1
chr11	21241159	21245341	+	21241159;21242131	21242024;21245341	ES	0.5	50	50	ENSMUST00000109578.8	ENSMUSG00000020128.16	Vps54	chr11	protein_coding	VPS54 GARP complex subunit
chr11	21213354	21214630	+	21213354	21214666	A3SS	0.5	50	50	ENSMUST00000109578.8	ENSMUSG00000020128.16	Vps54	chr11	protein_coding	VPS54 GARP complex subunit
chr11	21241159	21245341	+	21241159	21242024	3pMXE	0.5	50	50	ENSMUST00000132146.2	ENSMUSG00000020128.16	Vps54	chr11	protein_coding	VPS54 GARP complex subunit
chr11	21304406	21321015	-	21304406	21320187	5pMXE	0.5	50	50	ENSMUST00000102875.11	ENSMUSG00000001891.17	Ugp2	chr11	protein_coding	UDP-glucose pyrophosphorylase 2
chr11	21273303	21279035	-	21273303	21278871	A5SS	0.5	50	50	ENSMUST00000102875.11	ENSMUSG00000001891.17	Ugp2	chr11	protein_coding	UDP-glucose pyrophosphorylase 2
chr11	21522370	21602226	+	21522370;21598123	21598070;21602226	ES	0.5	50	50	ENSMUST00000131135.3	ENSMUSG00000020319.10	Wdpcp	chr11	protein_coding	WD repeat containing planar cell polarity effector
chr11	21639682	21645114	+	21639682;21641903	21641770;21645114	ES	0.5	50	50	ENSMUST00000020568.10	ENSMUSG00000020319.10	Wdpcp	chr11	protein_coding	WD repeat containing planar cell polarity effector
chr11	21645305	21671103	+	21645305;21662071	21661462;21671103	ES	0.5	50	50	ENSMUST00000020568.10	ENSMUSG00000020319.10	Wdpcp	chr11	protein_coding	WD repeat containing planar cell polarity effector
chr11	21639682	21641835	+	21639682	21641770	A3SS	0.33	50	50	ENSMUST00000020568.10	ENSMUSG00000020319.10	Wdpcp	chr11	protein_coding	WD repeat containing planar cell polarity effector
chr11	21763462	21766926	+	21763462	21807447	A3SS	0.5	50	50	ENSMUST00000020568.10	ENSMUSG00000020319.10	Wdpcp	chr11	protein_coding	WD repeat containing planar cell polarity effector
chr11	21639682	21645114	+	21639682;21641903	21641835;21645114	ES	0.5	50	50	ENSMUST00000149757.2	ENSMUSG00000020319.10	Wdpcp	chr11	protein_coding	WD repeat containing planar cell polarity effector
chr11	21645305	21671103	+	21645305	21661462	3pMXE	0.5	50	50	ENSMUST00000143608.2	ENSMUSG00000020319.10	Wdpcp	chr11	protein_coding	WD repeat containing planar cell polarity effector
chr11	21662071	21671103	+	21645305	21671103	A5SS	0.5	50	50	ENSMUST00000156624.2	ENSMUSG00000020319.10	Wdpcp	chr11	protein_coding	WD repeat containing planar cell polarity effector
chr11	21951189	21952754	-	21951189	21951548	5pMXE	0.5	50	50	ENSMUST00000006071.14	ENSMUSG00000005917.16	Otx1	chr11	protein_coding	orthodenticle homeobox 1
chr11	22101189	22119035	-	22101189;22101892	22101788;22119035	ES	0.5	50	50	ENSMUST00000045167.11	ENSMUSG00000042302.15	Ehbp1	chr11	protein_coding	EH domain binding protein 1
chr11	22198027	22254660	-	22198027	22235488	5pMXE	0.5	50	50	ENSMUST00000045167.11	ENSMUSG00000042302.15	Ehbp1	chr11	protein_coding	EH domain binding protein 1
chr11	22060611	22087838	-	22051230	22087838	A3SS	0.5	50	50	ENSMUST00000045167.11	ENSMUSG00000042302.15	Ehbp1	chr11	protein_coding	EH domain binding protein 1
chr11	22096700	22101067	-	22096625	22101067	A3SS	0.5	50	50	ENSMUST00000045167.11	ENSMUSG00000042302.15	Ehbp1	chr11	protein_coding	EH domain binding protein 1
chr11	22119174	22121143	-	22119174	22122825	A5SS	0.5	50	50	ENSMUST00000045167.11	ENSMUSG00000042302.15	Ehbp1	chr11	protein_coding	EH domain binding protein 1
chr11	22787195	22809494	-	22750444	22809494	A3SS	0.5	50	50	ENSMUST00000189990.2	ENSMUSG00000051650.12	B3gnt2	chr11	protein_coding	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
chr11	22787195	22810218	-	22787195	22809494	5pMXE	0.25	50	50	ENSMUST00000062844.11	ENSMUSG00000051650.12	B3gnt2	chr11	protein_coding	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
chr11	22787195	22810940	-	22787195	22809494	5pMXE	0.25	50	50	ENSMUST00000062844.11	ENSMUSG00000051650.12	B3gnt2	chr11	protein_coding	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
chr11	22787195	22906411	-	22787195	22809494	5pMXE	0.25	50	50	ENSMUST00000062844.11	ENSMUSG00000051650.12	B3gnt2	chr11	protein_coding	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
chr11	22787195	22810940	-	22787195	22810218	5pMXE	0.25	50	50	ENSMUST00000055549.4	ENSMUSG00000051650.12	B3gnt2	chr11	protein_coding	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
chr11	22787195	22906411	-	22787195	22810218	5pMXE	0.25	50	50	ENSMUST00000055549.4	ENSMUSG00000051650.12	B3gnt2	chr11	protein_coding	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
chr11	22787195	22906411	-	22787195	22810940	5pMXE	0.25	50	50	ENSMUST00000173660.2	ENSMUSG00000051650.12	B3gnt2	chr11	protein_coding	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
chr11	22850057	22906411	-	22787195	22906411	A3SS	0.33	50	50	ENSMUST00000160826.2	ENSMUSG00000098650.2	Commd1b	chr11	protein_coding	COMM domain containing 1B
chr11	22850057	22932079	-	22906692	22932079	A3SS&ES	0.5	50	50	ENSMUST00000160826.2	ENSMUSG00000098650.2	Commd1b	chr11	protein_coding	COMM domain containing 1B
chr11	22906232	22906411	-	22787195	22906411	A3SS	0.33	50	50	ENSMUST00000160826.2	ENSMUSG00000098650.2	Commd1b	chr11	protein_coding	COMM domain containing 1B
chr11	22906692	22922651	-	22906692	22932079	A5SS	0.33	50	50	ENSMUST00000160826.2	ENSMUSG00000098650.2	Commd1b	chr11	protein_coding	COMM domain containing 1B
chr11	22906692	22923900	-	22906692	22932079	A5SS	0.33	50	50	ENSMUST00000160826.2	ENSMUSG00000098650.2	Commd1b	chr11	protein_coding	COMM domain containing 1B
chr11	22850057	22932079	-	22850057;22906692	22906411;22932079	ES	0.5	50	50	ENSMUST00000159081.8	ENSMUSG00000051355.19	Commd1	chr11	protein_coding	COMM domain containing 1
chr11	22906232	22906411	-	22850057	22906411	A3SS	0.33	50	50	ENSMUST00000159081.8	ENSMUSG00000051355.19	Commd1	chr11	protein_coding	COMM domain containing 1
chr11	22906692	22922651	-	22906692	22923900	A5SS	0.5	50	50	ENSMUST00000057843.12	ENSMUSG00000051355.19	Commd1	chr11	protein_coding	COMM domain containing 1
chr11	22850057	22932079	-	22850057	22906411	5pMXE	0.5	50	50	ENSMUST00000161944.2	ENSMUSG00000051355.19	Commd1	chr11	protein_coding	COMM domain containing 1
chr11	22943319	22945930	+	22943319;22944387	22944298;22945930	ES	0.33	50	50	ENSMUST00000173867.8	ENSMUSG00000007739.11	Cct4	chr11	protein_coding	chaperonin containing Tcp1, subunit 4 (delta)
chr11	22944387	22946315	+	22944387;22946038	22945930;22946315	ES	0.5	50	50	ENSMUST00000173867.8	ENSMUSG00000007739.11	Cct4	chr11	protein_coding	chaperonin containing Tcp1, subunit 4 (delta)
chr11	22940945	22943267	+	22940880	22943267	A5SS	0.5	50	50	ENSMUST00000173867.8	ENSMUSG00000007739.11	Cct4	chr11	protein_coding	chaperonin containing Tcp1, subunit 4 (delta)
chr11	22943319	22945930	+	22943319	22944298	3pMXE	0.5	50	50	ENSMUST00000173853.8	ENSMUSG00000007739.11	Cct4	chr11	protein_coding	chaperonin containing Tcp1, subunit 4 (delta)
chr11	22940880;22946038	22945930;22946315	+	22940880;22944387	22943267;22946315	MXE	0.5	100	100	ENSMUST00000174047.8	ENSMUSG00000007739.11	Cct4	chr11	protein_coding	chaperonin containing Tcp1, subunit 4 (delta)
chr11	22943319;22946038	22945930;22946315	+	22943319;22944387	22944298;22946315	MXE	0.5	100	100	ENSMUST00000174047.8	ENSMUSG00000007739.11	Cct4	chr11	protein_coding	chaperonin containing Tcp1, subunit 4 (delta)
chr11	22940880	22945930	+	22940880;22943319	22943267;22945930	ES	0.33	50	50	ENSMUST00000020562.5	ENSMUSG00000007739.11	Cct4	chr11	protein_coding	chaperonin containing Tcp1, subunit 4 (delta)
chr11	22944387	22945930	+	22940880	22945930	A5SS	0.33	50	50	ENSMUST00000174659.2	ENSMUSG00000007739.11	Cct4	chr11	protein_coding	chaperonin containing Tcp1, subunit 4 (delta)
chr11	22944387	22946315	+	22946038	22946315	5pMXE	0.5	50	50	ENSMUST00000174746.2	ENSMUSG00000007739.11	Cct4	chr11	protein_coding	chaperonin containing Tcp1, subunit 4 (delta)
chr11	22963647	22965655	+	22957608	22965655	A5SS	0.5	50	50	ENSMUST00000173923.9	ENSMUSG00000049811.18	Fam161a	chr11	protein_coding	family with sequence similarity 161, member A
chr11	22971133	22978856	+	22971133	22973430	3pMXE	0.33	50	50	ENSMUST00000172602.9	ENSMUSG00000049811.18	Fam161a	chr11	protein_coding	family with sequence similarity 161, member A
chr11	22971133;22971661	22971494;22973430	+	22971133	22973430	cassetteExon	0.5	100	100	ENSMUST00000172602.9	ENSMUSG00000049811.18	Fam161a	chr11	protein_coding	family with sequence similarity 161, member A
chr11	22958626	22963539	+	22958626	22965659	A3SS	0.5	50	50	ENSMUST00000172602.9	ENSMUSG00000049811.18	Fam161a	chr11	protein_coding	family with sequence similarity 161, member A
chr11	22971133;22973529	22973430;22978856	+	22971133	22978856	cassetteExon	0.5	100	100	ENSMUST00000094363.4	ENSMUSG00000049811.18	Fam161a	chr11	protein_coding	family with sequence similarity 161, member A
chr11	22971133	22971494	+	22971133	22978856	A3SS	0.33	50	50	ENSMUST00000094363.4	ENSMUSG00000049811.18	Fam161a	chr11	protein_coding	family with sequence similarity 161, member A
chr11	23235219	23236745	+	23235219;23235935	23235801;23236745	ES	0.5	50	50	ENSMUST00000020538.13	ENSMUSG00000020290.15	Xpo1	chr11	protein_coding	exportin 1
chr11	23206717;23207537	23207389;23211835	+	23206717	23211835	cassetteExon	0.5	100	100	ENSMUST00000020538.13	ENSMUSG00000020290.15	Xpo1	chr11	protein_coding	exportin 1
chr11	23218912	23221133	+	23217763	23221133	A5SS	0.5	50	50	ENSMUST00000020538.13	ENSMUSG00000020290.15	Xpo1	chr11	protein_coding	exportin 1
chr11	23423054	23423170	+	23423054	23434102	A3SS	0.5	50	50	ENSMUST00000129368.3	ENSMUSG00000056342.17	Usp34	chr11	protein_coding	ubiquitin specific peptidase 34
chr11	23424389	23434102	+	23423054	23434102	A5SS	0.5	50	50	ENSMUST00000129368.3	ENSMUSG00000056342.17	Usp34	chr11	protein_coding	ubiquitin specific peptidase 34
chr11	23446881	23447775	-	23446876	23447775	A3SS	0.5	50	50	ENSMUST00000109539.8	ENSMUSG00000020288.14	Ahsa2	chr11	protein_coding	AHA1, activator of heat shock protein ATPase 2
chr11	23441582	23442138	-	23441582	23442218	A5SS	0.5	50	50	ENSMUST00000109539.8	ENSMUSG00000020288.14	Ahsa2	chr11	protein_coding	AHA1, activator of heat shock protein ATPase 2
chr11	23445064	23446766	-	23445064	23446691	A5SS	0.5	50	50	ENSMUST00000109539.8	ENSMUSG00000020288.14	Ahsa2	chr11	protein_coding	AHA1, activator of heat shock protein ATPase 2
chr11	23446881	23447502	-	23446881	23447775	A5SS	0.5	50	50	ENSMUST00000020529.13	ENSMUSG00000020288.14	Ahsa2	chr11	protein_coding	AHA1, activator of heat shock protein ATPase 2
chr11	23449197	23449386	+	23448585	23449386	A5SS	0.5	50	50	ENSMUST00000144783.2	ENSMUSG00000086459.3	1700030C12Rik	chr11	lncRNA	RIKEN cDNA 1700030C12 gene
chr11	23468976	23469498	-	23468976	23469069	5pMXE	0.5	50	50	ENSMUST00000239488.2	ENSMUSG00000020286.14	1700093K21Rik	chr11	protein_coding	RIKEN cDNA 1700093K21 gene
chr11	23570467	23574936	-	23570467;23572529	23572436;23574936	ES	0.33	50	50	ENSMUST00000155903.8	ENSMUSG00000042208.16	0610010F05Rik	chr11	protein_coding	RIKEN cDNA 0610010F05 gene
chr11	23581334;23583210	23583112;23583493	-	23581334	23583493	cassetteExon	0.5	100	100	ENSMUST00000155903.8	ENSMUSG00000042208.16	0610010F05Rik	chr11	protein_coding	RIKEN cDNA 0610010F05 gene
chr11	23525517	23526731	-	23516195	23526731	A3SS	0.5	50	50	ENSMUST00000155903.8	ENSMUSG00000042208.16	0610010F05Rik	chr11	protein_coding	RIKEN cDNA 0610010F05 gene
chr11	23572525	23574936	-	23572529	23574936	A3SS	0.33	50	50	ENSMUST00000155903.8	ENSMUSG00000042208.16	0610010F05Rik	chr11	protein_coding	RIKEN cDNA 0610010F05 gene
chr11	23570467;23572525	23572436;23574936	-	23570467	23574936	cassetteExon	0.5	100	100	ENSMUST00000093267.11	ENSMUSG00000042208.16	0610010F05Rik	chr11	protein_coding	RIKEN cDNA 0610010F05 gene
chr11	23601055	23615747	-	23601055;23606130	23605436;23615747	ES	0.33	50	50	ENSMUST00000020523.4	ENSMUSG00000020283.6	Pex13	chr11	protein_coding	peroxisomal biogenesis factor 13
chr11	23606130;23606583	23606386;23615747	-	23606130	23615747	cassetteExon	0.5	100	100	ENSMUST00000020523.4	ENSMUSG00000020283.6	Pex13	chr11	protein_coding	peroxisomal biogenesis factor 13
chr11	23606130	23615374	-	23606130	23615747	A5SS	0.33	50	50	ENSMUST00000020523.4	ENSMUSG00000020283.6	Pex13	chr11	protein_coding	peroxisomal biogenesis factor 13
chr11	23606130	23615747	-	23601055	23615747	A3SS	0.33	50	50	ENSMUST00000130811.2	ENSMUSG00000020283.6	Pex13	chr11	protein_coding	peroxisomal biogenesis factor 13
chr11	23606583	23615747	-	23601055	23615747	A3SS	0.33	50	50	ENSMUST00000130811.2	ENSMUSG00000020283.6	Pex13	chr11	protein_coding	peroxisomal biogenesis factor 13
chr11	23601055	23605436	-	23601055	23615747	A5SS	0.5	50	50	ENSMUST00000130811.2	ENSMUSG00000020283.6	Pex13	chr11	protein_coding	peroxisomal biogenesis factor 13
chr11	23606130	23615374	-	23606130	23606386	A5SS&ES	0.33	50	50	ENSMUST00000124839.2	ENSMUSG00000020283.6	Pex13	chr11	protein_coding	peroxisomal biogenesis factor 13
chr11	23615748	23617278	+	23615748	23617288	A3SS	0.5	50	50	ENSMUST00000109525.8	ENSMUSG00000020280.13	Pus10	chr11	protein_coding	pseudouridylate synthase 10
chr11	23616453	23617288	+	23615748	23617288	A5SS	0.5	50	50	ENSMUST00000109525.8	ENSMUSG00000020280.13	Pus10	chr11	protein_coding	pseudouridylate synthase 10
chr11	23616453	23617278	+	23615748	23617278	A5SS	0.33	50	50	ENSMUST00000020520.11	ENSMUSG00000020280.13	Pus10	chr11	protein_coding	pseudouridylate synthase 10
chr11	23616549	23617278	+	23615748	23617278	A5SS	0.33	50	50	ENSMUST00000020520.11	ENSMUSG00000020280.13	Pus10	chr11	protein_coding	pseudouridylate synthase 10
chr11	23616453	23617288	+	23616453	23617278	A3SS	0.5	50	50	ENSMUST00000058163.11	ENSMUSG00000020280.13	Pus10	chr11	protein_coding	pseudouridylate synthase 10
chr11	23616549	23617278	+	23616453	23617278	A5SS	0.33	50	50	ENSMUST00000058163.11	ENSMUSG00000020280.13	Pus10	chr11	protein_coding	pseudouridylate synthase 10
chr11	23818480	23820743	-	23818480;23820302	23820193;23820743	ES	0.5	50	50	ENSMUST00000020513.10	ENSMUSG00000020273.14	Papolg	chr11	protein_coding	poly(A) polymerase gamma
chr11	23829963	23834061	-	23829963;23832294	23832183;23834061	ES	0.5	50	50	ENSMUST00000020513.10	ENSMUSG00000020273.14	Papolg	chr11	protein_coding	poly(A) polymerase gamma
chr11	24030739	24035321	+	24028445	24035321	A5SS	0.5	50	50	ENSMUST00000000881.13	ENSMUSG00000000861.16	Bcl11a	chr11	protein_coding	B cell CLL/lymphoma 11A (zinc finger protein)
chr11	24092696	24108253	+	24035650	24108253	A5SS	0.5	50	50	ENSMUST00000000881.13	ENSMUSG00000000861.16	Bcl11a	chr11	protein_coding	B cell CLL/lymphoma 11A (zinc finger protein)
chr11	24113288	24122699	+	24114888	24122699	A5SS	0.5	50	50	ENSMUST00000000881.13	ENSMUSG00000000861.16	Bcl11a	chr11	protein_coding	B cell CLL/lymphoma 11A (zinc finger protein)
chr11	24118799	24122666	-	24110914	24122666	A3SS	0.5	50	50	ENSMUST00000131383.2	ENSMUSG00000085516.2	4930538E20Rik	chr11	lncRNA	RIKEN cDNA 4930538E20 gene
chr11	24869621	24876001	-	24869621;24875140	24874995;24876001	ES	0.5	50	50	ENSMUST00000130092.2	ENSMUSG00000087145.8	Gm12665	chr11	lncRNA	predicted gene 12665
chr11	24864816	24869523	-	24859730	24869523	A3SS	0.5	50	50	ENSMUST00000130092.2	ENSMUSG00000087145.8	Gm12665	chr11	lncRNA	predicted gene 12665
chr11	24859730	24863683	-	24859730	24869523	A5SS	0.5	50	50	ENSMUST00000130092.2	ENSMUSG00000087145.8	Gm12665	chr11	lncRNA	predicted gene 12665
chr11	25307837	25308155	+	25307636	25308155	A5SS	0.5	50	50	ENSMUST00000125234.8	ENSMUSG00000033015.17	4933427E13Rik	chr11	lncRNA	RIKEN cDNA 4933427E13 gene
chr11	25553036;25554022	25553906;25569510	-	25553036	25569510	cassetteExon	0.5	100	100	ENSMUST00000153834.8	ENSMUSG00000032985.16	5730522E02Rik	chr11	protein_coding	RIKEN cDNA 5730522E02 gene
chr11	25567872	25569510	-	25553036	25569510	A3SS	0.33	50	50	ENSMUST00000153834.8	ENSMUSG00000032985.16	5730522E02Rik	chr11	protein_coding	RIKEN cDNA 5730522E02 gene
chr11	25588146	25598012	-	25569572	25598012	A3SS	0.33	50	50	ENSMUST00000153834.8	ENSMUSG00000032985.16	5730522E02Rik	chr11	protein_coding	RIKEN cDNA 5730522E02 gene
chr11	25597922	25598012	-	25569572	25598012	A3SS	0.33	50	50	ENSMUST00000153834.8	ENSMUSG00000032985.16	5730522E02Rik	chr11	protein_coding	RIKEN cDNA 5730522E02 gene
chr11	25567872	25569510	-	25554022	25569510	A3SS	0.33	50	50	ENSMUST00000144503.2	ENSMUSG00000032985.16	5730522E02Rik	chr11	protein_coding	RIKEN cDNA 5730522E02 gene
chr11	25720570	25936751	-	25602068	25936751	A3SS	0.33	50	50	ENSMUST00000125773.8	ENSMUSG00000032985.16	5730522E02Rik	chr11	protein_coding	RIKEN cDNA 5730522E02 gene
chr11	25799533	25936751	-	25602068	25936751	A3SS	0.33	50	50	ENSMUST00000125773.8	ENSMUSG00000032985.16	5730522E02Rik	chr11	protein_coding	RIKEN cDNA 5730522E02 gene
chr11	26053450	26160491	-	25936812	26160491	A3SS	0.5	50	50	ENSMUST00000125773.8	ENSMUSG00000032985.16	5730522E02Rik	chr11	protein_coding	RIKEN cDNA 5730522E02 gene
chr11	25602068	25718982	-	25602068	25936751	A5SS	0.5	50	50	ENSMUST00000125773.8	ENSMUSG00000032985.16	5730522E02Rik	chr11	protein_coding	RIKEN cDNA 5730522E02 gene
chr11	25936812	26031480	-	25936812	26160491	A5SS	0.5	50	50	ENSMUST00000125773.8	ENSMUSG00000032985.16	5730522E02Rik	chr11	protein_coding	RIKEN cDNA 5730522E02 gene
chr11	25799533	25936751	-	25720570	25936751	A3SS	0.33	50	50	ENSMUST00000109511.8	ENSMUSG00000032985.16	5730522E02Rik	chr11	protein_coding	RIKEN cDNA 5730522E02 gene
chr11	25597922	25598012	-	25588146	25598012	A3SS	0.33	50	50	ENSMUST00000144841.2	ENSMUSG00000032985.16	5730522E02Rik	chr11	protein_coding	RIKEN cDNA 5730522E02 gene
chr11	26349709	26357548	+	26349709;26353378	26353322;26357548	ES	0.5	50	50	ENSMUST00000004120.9	ENSMUSG00000004018.10	Fancl	chr11	protein_coding	Fanconi anemia, complementation group L
chr11	26384500	26418335	+	26384500;26409836	26409686;26418335	ES	0.5	50	50	ENSMUST00000004120.9	ENSMUSG00000004018.10	Fancl	chr11	protein_coding	Fanconi anemia, complementation group L
chr11	26418717	26418816	+	26418717	26418801	A3SS	0.5	50	50	ENSMUST00000004120.9	ENSMUSG00000004018.10	Fancl	chr11	protein_coding	Fanconi anemia, complementation group L
chr11	26419768	26420807	+	26419768	26420877	A3SS	0.5	50	50	ENSMUST00000004120.9	ENSMUSG00000004018.10	Fancl	chr11	protein_coding	Fanconi anemia, complementation group L
chr11	26337310	26347746	+	26337310	26372408	A3SS	0.5	50	50	ENSMUST00000143471.2	ENSMUSG00000004018.10	Fancl	chr11	protein_coding	Fanconi anemia, complementation group L
chr11	26357648	26372408	+	26337310	26372408	A5SS	0.5	50	50	ENSMUST00000143471.2	ENSMUSG00000004018.10	Fancl	chr11	protein_coding	Fanconi anemia, complementation group L
chr11	26485642;26486392	26486268;26497839	-	26485642	26497839	cassetteExon	0.5	100	100	ENSMUST00000109504.8	ENSMUSG00000064090.15	Vrk2	chr11	protein_coding	vaccinia related kinase 2
chr11	26533487	26541587	-	26500075	26541587	A3SS	0.5	50	50	ENSMUST00000109504.8	ENSMUSG00000064090.15	Vrk2	chr11	protein_coding	vaccinia related kinase 2
chr11	26541727	26543954	-	26541727	26543590	5pMXE	0.33	50	50	ENSMUST00000078362.13	ENSMUSG00000064090.15	Vrk2	chr11	protein_coding	vaccinia related kinase 2
chr11	26541727	26543386	-	26541727	26543590	A5SS	0.33	50	50	ENSMUST00000078362.13	ENSMUSG00000064090.15	Vrk2	chr11	protein_coding	vaccinia related kinase 2
chr11	26541727	26543386	-	26541727	26543954	A5SS	0.33	50	50	ENSMUST00000156264.2	ENSMUSG00000064090.15	Vrk2	chr11	protein_coding	vaccinia related kinase 2
chr11	28338948	28384081	-	28338948;28346165	28346046;28384081	ES	0.25	50	50	ENSMUST00000093253.10	ENSMUSG00000032878.17	Ccdc85a	chr11	protein_coding	coiled-coil domain containing 85A
chr11	28338948;28342952	28342854;28346046	-	28338948	28346046	cassetteExon	0.5	100	100	ENSMUST00000093253.10	ENSMUSG00000032878.17	Ccdc85a	chr11	protein_coding	coiled-coil domain containing 85A
chr11	28346165;28349510	28349376;28384081	-	28346165	28384081	cassetteExon	0.5	100	100	ENSMUST00000093253.10	ENSMUSG00000032878.17	Ccdc85a	chr11	protein_coding	coiled-coil domain containing 85A
chr11	28362486	28384081	-	28346165	28384081	A3SS	0.25	50	50	ENSMUST00000093253.10	ENSMUSG00000032878.17	Ccdc85a	chr11	protein_coding	coiled-coil domain containing 85A
chr11	28349510	28384081	-	28338948	28384081	A3SS	0.25	50	50	ENSMUST00000109502.9	ENSMUSG00000032878.17	Ccdc85a	chr11	protein_coding	coiled-coil domain containing 85A
chr11	28362486	28384081	-	28338948	28384081	A3SS	0.25	50	50	ENSMUST00000109502.9	ENSMUSG00000032878.17	Ccdc85a	chr11	protein_coding	coiled-coil domain containing 85A
chr11	28338948	28342854	-	28338948	28384081	A5SS	0.33	50	50	ENSMUST00000109502.9	ENSMUSG00000032878.17	Ccdc85a	chr11	protein_coding	coiled-coil domain containing 85A
chr11	28349510;28362486	28362403;28384081	-	28349510	28384081	cassetteExon	0.5	100	100	ENSMUST00000146385.9	ENSMUSG00000032878.17	Ccdc85a	chr11	protein_coding	coiled-coil domain containing 85A
chr11	28865780	28871403	+	28865780;28866969	28866850;28871403	ES	0.5	50	50	ENSMUST00000020759.12	ENSMUSG00000020467.16	Efemp1	chr11	protein_coding	epidermal growth factor-containing fibulin-like extracellular matrix protein 1
chr11	28804554	28817466	+	28804554	28860610	A3SS	0.5	50	50	ENSMUST00000124103.2	ENSMUSG00000020467.16	Efemp1	chr11	protein_coding	epidermal growth factor-containing fibulin-like extracellular matrix protein 1
chr11	28818039	28860610	+	28804554	28860610	A5SS	0.5	50	50	ENSMUST00000124103.2	ENSMUSG00000020467.16	Efemp1	chr11	protein_coding	epidermal growth factor-containing fibulin-like extracellular matrix protein 1
chr11	29082905	29083856	+	29082905	29083852	A3SS	0.5	50	50	ENSMUST00000154924.8	ENSMUSG00000020464.16	Pnpt1	chr11	protein_coding	polyribonucleotide nucleotidyltransferase 1
chr11	29088604	29089259	+	29088604	29089224	A3SS	0.5	50	50	ENSMUST00000154924.8	ENSMUSG00000020464.16	Pnpt1	chr11	protein_coding	polyribonucleotide nucleotidyltransferase 1
chr11	29150803	29155546	+	29150803;29152908	29152867;29155546	ES	0.5	50	50	ENSMUST00000102856.9	ENSMUSG00000020463.16	Ppp4r3b	chr11	protein_coding	protein phosphatase 4 regulatory subunit 3B
chr11	29123807	29124673	+	29123447	29124673	A5SS	0.5	50	50	ENSMUST00000102856.9	ENSMUSG00000020463.16	Ppp4r3b	chr11	protein_coding	protein phosphatase 4 regulatory subunit 3B
chr11	29159434	29161116	+	29159486	29161116	A5SS	0.5	50	50	ENSMUST00000020755.12	ENSMUSG00000020463.16	Ppp4r3b	chr11	protein_coding	protein phosphatase 4 regulatory subunit 3B
chr11	29195150	29196516	-	29195150	29197015	A5SS	0.5	50	50	ENSMUST00000020754.10	ENSMUSG00000020462.15	Cfap36	chr11	protein_coding	cilia and flagella associated protein 36
chr11	29420456	29430490	+	29420456;29427458	29427294;29430490	ES	0.5	50	50	ENSMUST00000040182.13	ENSMUSG00000032740.18	Ccdc88a	chr11	protein_coding	coiled coil domain containing 88A
chr11	29444093;29447426	29447343;29448409	+	29444093	29448409	cassetteExon	0.5	100	100	ENSMUST00000040182.13	ENSMUSG00000032740.18	Ccdc88a	chr11	protein_coding	coiled coil domain containing 88A
chr11	29415738	29420318	+	29415738	29420315	A3SS	0.5	50	50	ENSMUST00000040182.13	ENSMUSG00000032740.18	Ccdc88a	chr11	protein_coding	coiled coil domain containing 88A
chr11	29444093	29448409	+	29444093	29447343	3pMXE	0.5	50	50	ENSMUST00000144450.2	ENSMUSG00000032740.18	Ccdc88a	chr11	protein_coding	coiled coil domain containing 88A
chr11	29463676	29464917	-	29463676;29464522	29464432;29464917	ES	0.5	50	50	ENSMUST00000133103.2	ENSMUSG00000032673.6	Prorsd1	chr11	protein_coding	prolyl-tRNA synthetase domain containing 1
chr11	29476487	29479929	+	29476487;29476843	29476693;29479929	ES	0.33	50	50	ENSMUST00000133452.8	ENSMUSG00000020459.15	Mtif2	chr11	protein_coding	mitochondrial translational initiation factor 2
chr11	29476565	29479929	+	29476843	29479929	A5SS&ES	0.33	50	50	ENSMUST00000133452.8	ENSMUSG00000020459.15	Mtif2	chr11	protein_coding	mitochondrial translational initiation factor 2
chr11	29476487	29479929	+	29476565	29479929	A5SS	0.33	50	50	ENSMUST00000136351.8	ENSMUSG00000020459.15	Mtif2	chr11	protein_coding	mitochondrial translational initiation factor 2
chr11	29476487	29479929	+	29476843	29479929	A5SS	0.33	50	50	ENSMUST00000156352.2	ENSMUSG00000020459.15	Mtif2	chr11	protein_coding	mitochondrial translational initiation factor 2
chr11	29483992	29486833	+	29483992;29485266	29485090;29486833	ES	0.5	50	50	ENSMUST00000020749.13	ENSMUSG00000020459.15	Mtif2	chr11	protein_coding	mitochondrial translational initiation factor 2
chr11	29513956	29521650	+	29513956;29519375	29519201;29521650	ES	0.5	50	50	ENSMUST00000020753.4	ENSMUSG00000020461.11	Clhc1	chr11	protein_coding	clathrin heavy chain linker domain containing 1
chr11	29519375	29525345	+	29519375;29521852	29521650;29525345	ES	0.5	50	50	ENSMUST00000020753.4	ENSMUSG00000020461.11	Clhc1	chr11	protein_coding	clathrin heavy chain linker domain containing 1
chr11	29503762	29506069	+	29503762	29506036	A3SS	0.5	50	50	ENSMUST00000020753.4	ENSMUSG00000020461.11	Clhc1	chr11	protein_coding	clathrin heavy chain linker domain containing 1
chr11	29513956;29521852	29521650;29525345	+	29513956;29519375	29519201;29525345	MXE	0.5	100	100	ENSMUST00000131366.8	ENSMUSG00000020461.11	Clhc1	chr11	protein_coding	clathrin heavy chain linker domain containing 1
chr11	29655591	29683633	+	29655591;29658770	29656410;29683633	ES	0.25	50	50	ENSMUST00000102843.10	ENSMUSG00000020458.17	Rtn4	chr11	protein_coding	reticulon 4
chr11	29686498	29691500	+	29686498;29691050	29690981;29691500	ES	0.5	50	50	ENSMUST00000102843.10	ENSMUSG00000020458.17	Rtn4	chr11	protein_coding	reticulon 4
chr11	29691050	29691695	+	29691050;29691546	29691500;29691695	ES	0.33	50	50	ENSMUST00000102843.10	ENSMUSG00000020458.17	Rtn4	chr11	protein_coding	reticulon 4
chr11	29643962	29655535	+	29643693	29655535	A5SS	0.5	50	50	ENSMUST00000102843.10	ENSMUSG00000020458.17	Rtn4	chr11	protein_coding	reticulon 4
chr11	29668882	29683633	+	29658770	29683633	A5SS	0.25	50	50	ENSMUST00000102843.10	ENSMUSG00000020458.17	Rtn4	chr11	protein_coding	reticulon 4
chr11	29643693	29683633	+	29643693;29655591	29655535;29683633	ES	0.25	50	50	ENSMUST00000102842.10	ENSMUSG00000020458.17	Rtn4	chr11	protein_coding	reticulon 4
chr11	29655591	29656410	+	29655591	29683633	A3SS	0.5	50	50	ENSMUST00000102842.10	ENSMUSG00000020458.17	Rtn4	chr11	protein_coding	reticulon 4
chr11	29658770	29683633	+	29655591	29683633	A5SS	0.25	50	50	ENSMUST00000102842.10	ENSMUSG00000020458.17	Rtn4	chr11	protein_coding	reticulon 4
chr11	29668882	29683633	+	29655591	29683633	A5SS	0.25	50	50	ENSMUST00000102842.10	ENSMUSG00000020458.17	Rtn4	chr11	protein_coding	reticulon 4
chr11	29658770	29683633	+	29643693	29683633	A5SS	0.25	50	50	ENSMUST00000078830.11	ENSMUSG00000020458.17	Rtn4	chr11	protein_coding	reticulon 4
chr11	29668882	29683633	+	29643693	29683633	A5SS	0.25	50	50	ENSMUST00000078830.11	ENSMUSG00000020458.17	Rtn4	chr11	protein_coding	reticulon 4
chr11	29686498;29691050	29690981;29691695	+	29686498	29691695	cassetteExon	0.5	100	100	ENSMUST00000156217.8	ENSMUSG00000020458.17	Rtn4	chr11	protein_coding	reticulon 4
chr11	29686498;29691546	29691500;29691695	+	29686498	29691695	cassetteExon	0.5	100	100	ENSMUST00000156217.8	ENSMUSG00000020458.17	Rtn4	chr11	protein_coding	reticulon 4
chr11	29686498;29691546	29691500;29691695	+	29686498;29691050	29690981;29691695	MXE	0.5	100	100	ENSMUST00000141719.8	ENSMUSG00000020458.17	Rtn4	chr11	protein_coding	reticulon 4
chr11	29686498	29691695	+	29691546	29691695	5pMXE	0.33	50	50	ENSMUST00000126162.2	ENSMUSG00000020458.17	Rtn4	chr11	protein_coding	reticulon 4
chr11	29691050	29691695	+	29691546	29691695	A5SS	0.33	50	50	ENSMUST00000126162.2	ENSMUSG00000020458.17	Rtn4	chr11	protein_coding	reticulon 4
chr11	29699348	29699805	-	29699421	29699805	A3SS	0.5	50	50	ENSMUST00000058902.6	ENSMUSG00000044072.15	Eml6	chr11	protein_coding	echinoderm microtubule associated protein like 6
chr11	29769184	29771639	-	29769092	29771639	A3SS	0.5	50	50	ENSMUST00000058902.6	ENSMUSG00000044072.15	Eml6	chr11	protein_coding	echinoderm microtubule associated protein like 6
chr11	29703221	29703410	-	29703221	29704848	A5SS	0.5	50	50	ENSMUST00000058902.6	ENSMUSG00000044072.15	Eml6	chr11	protein_coding	echinoderm microtubule associated protein like 6
chr11	30109445	30147724	-	30109445	30169579	A5SS	0.5	50	50	ENSMUST00000006629.14	ENSMUSG00000020315.19	Sptbn1	chr11	protein_coding	spectrin beta, non-erythrocytic 1
chr11	30169772	30217013	-	30169772	30217948	A5SS	0.5	50	50	ENSMUST00000006629.14	ENSMUSG00000020315.19	Sptbn1	chr11	protein_coding	spectrin beta, non-erythrocytic 1
chr11	30396380;30404212	30404146;30404671	-	30396380	30404671	cassetteExon	0.5	100	100	ENSMUST00000041763.14	ENSMUSG00000040919.14	4930505A04Rik	chr11	protein_coding	RIKEN cDNA 4930505A04 gene
chr11	30815589;30816279	30816036;30824118	+	30815589	30824118	cassetteExon	0.5	100	100	ENSMUST00000041231.14	ENSMUSG00000040850.18	Psme4	chr11	protein_coding	proteasome (prosome, macropain) activator subunit 4
chr11	30806115	30806889	+	30806115	30811348	A3SS	0.5	50	50	ENSMUST00000041231.14	ENSMUSG00000040850.18	Psme4	chr11	protein_coding	proteasome (prosome, macropain) activator subunit 4
chr11	30722587	30741092	+	30722224	30741092	A5SS	0.5	50	50	ENSMUST00000041231.14	ENSMUSG00000040850.18	Psme4	chr11	protein_coding	proteasome (prosome, macropain) activator subunit 4
chr11	30948521;30978805	30978693;30978908	+	30948521	30978908	cassetteExon	0.5	100	100	ENSMUST00000203878.3	ENSMUSG00000020305.14	Asb3	chr11	protein_coding	ankyrin repeat and SOCS box-containing 3
chr11	30904569	30948313	+	30835546	30948313	A5SS	0.5	50	50	ENSMUST00000203878.3	ENSMUSG00000020305.14	Asb3	chr11	protein_coding	ankyrin repeat and SOCS box-containing 3
chr11	30885059;30885445	30885368;30889497	-	30885059	30889497	cassetteExon	0.5	100	100	ENSMUST00000073192.14	ENSMUSG00000020311.18	Erlec1	chr11	protein_coding	endoplasmic reticulum lectin 1
chr11	30885059;30885445	30885368;30893039	-	30885059;30889621	30889497;30893039	MXE	0.5	100	100	ENSMUST00000073192.14	ENSMUSG00000020311.18	Erlec1	chr11	protein_coding	endoplasmic reticulum lectin 1
chr11	30903116	30903914	-	30902676	30903914	A3SS	0.5	50	50	ENSMUST00000073192.14	ENSMUSG00000020311.18	Erlec1	chr11	protein_coding	endoplasmic reticulum lectin 1
chr11	30885445	30893039	-	30885445;30889621	30889497;30893039	ES	0.5	50	50	ENSMUST00000129593.9	ENSMUSG00000020311.18	Erlec1	chr11	protein_coding	endoplasmic reticulum lectin 1
chr11	30927746	30936112	-	30927746;30929600	30929565;30936112	ES	0.5	50	50	ENSMUST00000101394.5	ENSMUSG00000020309.7	Chac2	chr11	protein_coding	ChaC, cation transport regulator 2
chr11	31315392	31317726	-	31315543	31317726	A3SS	0.5	50	50	ENSMUST00000020546.3	ENSMUSG00000020303.3	Stc2	chr11	protein_coding	stanniocalcin 2
chr11	31318327	31319712	-	31317868	31319712	A3SS	0.5	50	50	ENSMUST00000020546.3	ENSMUSG00000020303.3	Stc2	chr11	protein_coding	stanniocalcin 2
chr11	31318327	31318896	-	31318327	31319712	A5SS	0.5	50	50	ENSMUST00000152094.2	ENSMUSG00000020303.3	Stc2	chr11	protein_coding	stanniocalcin 2
chr11	31752448;31752981	31752830;31774293	-	31752448	31774293	cassetteExon	0.5	100	100	ENSMUST00000129425.8	ENSMUSG00000085772.8	D630024D03Rik	chr11	lncRNA	RIKEN cDNA D630024D03 gene
chr11	31750813	31750950	-	31740425	31750950	A3SS	0.5	50	50	ENSMUST00000129425.8	ENSMUSG00000085772.8	D630024D03Rik	chr11	lncRNA	RIKEN cDNA D630024D03 gene
chr11	31773496	31774293	-	31752448	31774293	A3SS	0.33	50	50	ENSMUST00000129425.8	ENSMUSG00000085772.8	D630024D03Rik	chr11	lncRNA	RIKEN cDNA D630024D03 gene
chr11	31773496	31774293	-	31752981	31774293	A3SS	0.33	50	50	ENSMUST00000134944.2	ENSMUSG00000085772.8	D630024D03Rik	chr11	lncRNA	RIKEN cDNA D630024D03 gene
chr11	31839939	31868801	+	31839939;31858875	31858825;31868801	ES	0.5	50	50	ENSMUST00000020543.13	ENSMUSG00000020300.15	Cpeb4	chr11	protein_coding	cytoplasmic polyadenylation element binding protein 4
chr11	31858875	31870409	+	31858875;31868824	31868801;31870409	ES	0.5	50	50	ENSMUST00000020543.13	ENSMUSG00000020300.15	Cpeb4	chr11	protein_coding	cytoplasmic polyadenylation element binding protein 4
chr11	31839939;31858875	31858825;31870409	+	31839939;31868824	31868801;31870409	MXE	0.5	100	100	ENSMUST00000109412.9	ENSMUSG00000020300.15	Cpeb4	chr11	protein_coding	cytoplasmic polyadenylation element binding protein 4
chr11	31967734	31981770	+	31967734	32005013	A3SS	0.5	50	50	ENSMUST00000020537.9	ENSMUSG00000020297.11	Nsg2	chr11	protein_coding	neuron specific gene family member 2
chr11	32143381	32143734	-	32143378	32143734	A3SS	0.5	50	50	ENSMUST00000145401.8	ENSMUSG00000020279.11	Il9r	chr11	protein_coding	interleukin 9 receptor
chr11	32145198	32150191	-	32145183	32150191	A3SS	0.5	50	50	ENSMUST00000145401.8	ENSMUSG00000020279.11	Il9r	chr11	protein_coding	interleukin 9 receptor
chr11	32141849	32142699	-	32141849	32142647	A5SS	0.5	50	50	ENSMUST00000145401.8	ENSMUSG00000020279.11	Il9r	chr11	protein_coding	interleukin 9 receptor
chr11	32143879;32144737	32144359;32145073	-	32143879	32145073	cassetteExon	0.5	100	100	ENSMUST00000020518.11	ENSMUSG00000020279.11	Il9r	chr11	protein_coding	interleukin 9 receptor
chr11	32143381	32143734	-	32143381	32143679	A5SS	0.5	50	50	ENSMUST00000020518.11	ENSMUSG00000020279.11	Il9r	chr11	protein_coding	interleukin 9 receptor
chr11	32157050	32157574	+	32157050	32157557	A3SS	0.5	50	50	ENSMUST00000039601.10	ENSMUSG00000040767.11	Snrnp25	chr11	protein_coding	small nuclear ribonucleoprotein 25 (U11/U12)
chr11	32157662	32158312	+	32157662	32158334	A3SS	0.5	50	50	ENSMUST00000039601.10	ENSMUSG00000040767.11	Snrnp25	chr11	protein_coding	small nuclear ribonucleoprotein 25 (U11/U12)
chr11	32157050	32157574	+	32157043	32157574	A5SS	0.5	50	50	ENSMUST00000149043.3	ENSMUSG00000040767.11	Snrnp25	chr11	protein_coding	small nuclear ribonucleoprotein 25 (U11/U12)
chr11	32165123;32165680	32165576;32165934	-	32165123	32165934	cassetteExon	0.5	100	100	ENSMUST00000020524.15	ENSMUSG00000020282.19	Rhbdf1	chr11	protein_coding	rhomboid 5 homolog 1
chr11	32164483	32164910	-	32164602	32164910	A3SS	0.5	50	50	ENSMUST00000020524.15	ENSMUSG00000020282.19	Rhbdf1	chr11	protein_coding	rhomboid 5 homolog 1
chr11	32166347	32172169	-	32166282	32172169	A3SS	0.5	50	50	ENSMUST00000020524.15	ENSMUSG00000020282.19	Rhbdf1	chr11	protein_coding	rhomboid 5 homolog 1
chr11	32191935	32200125	-	32191935;32198226	32198145;32200125	ES	0.5	50	50	ENSMUST00000124640.8	ENSMUSG00000020289.16	Nprl3	chr11	protein_coding	nitrogen permease regulator-like 3
chr11	32187406;32189290	32188989;32189797	-	32187406	32189797	cassetteExon	0.5	100	100	ENSMUST00000124640.8	ENSMUSG00000020289.16	Nprl3	chr11	protein_coding	nitrogen permease regulator-like 3
chr11	32200278;32203949	32203875;32213025	-	32200278	32213025	cassetteExon	0.5	100	100	ENSMUST00000124640.8	ENSMUSG00000020289.16	Nprl3	chr11	protein_coding	nitrogen permease regulator-like 3
chr11	32200278;32205568	32205439;32213025	-	32200278	32213025	cassetteExon	0.5	100	100	ENSMUST00000124640.8	ENSMUSG00000020289.16	Nprl3	chr11	protein_coding	nitrogen permease regulator-like 3
chr11	32183116	32183904	-	32176835	32183904	A3SS	0.5	50	50	ENSMUST00000124640.8	ENSMUSG00000020289.16	Nprl3	chr11	protein_coding	nitrogen permease regulator-like 3
chr11	32209255	32213025	-	32200278	32213025	A3SS	0.25	50	50	ENSMUST00000124640.8	ENSMUSG00000020289.16	Nprl3	chr11	protein_coding	nitrogen permease regulator-like 3
chr11	32200278	32217505	-	32200278	32213025	A5SS&ES	0.25	50	50	ENSMUST00000124640.8	ENSMUSG00000020289.16	Nprl3	chr11	protein_coding	nitrogen permease regulator-like 3
chr11	32213094	32217505	-	32213094	32217423	A5SS	0.5	50	50	ENSMUST00000124640.8	ENSMUSG00000020289.16	Nprl3	chr11	protein_coding	nitrogen permease regulator-like 3
chr11	32200278	32205439	-	32200278;32203949	32203875;32205439	ES	0.5	50	50	ENSMUST00000109390.8	ENSMUSG00000020289.16	Nprl3	chr11	protein_coding	nitrogen permease regulator-like 3
chr11	32205568	32209217	-	32205568	32206093	5pMXE	0.33	50	50	ENSMUST00000109390.8	ENSMUSG00000020289.16	Nprl3	chr11	protein_coding	nitrogen permease regulator-like 3
chr11	32205568	32213025	-	32205568	32206093	5pMXE	0.33	50	50	ENSMUST00000109390.8	ENSMUSG00000020289.16	Nprl3	chr11	protein_coding	nitrogen permease regulator-like 3
chr11	32200278;32205568	32205439;32213025	-	32200278;32203949	32203875;32213025	MXE	0.5	100	100	ENSMUST00000141859.8	ENSMUSG00000020289.16	Nprl3	chr11	protein_coding	nitrogen permease regulator-like 3
chr11	32203949;32205568	32205439;32213025	-	32203949	32213025	cassetteExon	0.5	100	100	ENSMUST00000141859.8	ENSMUSG00000020289.16	Nprl3	chr11	protein_coding	nitrogen permease regulator-like 3
chr11	32209255	32213025	-	32203949	32213025	A3SS	0.25	50	50	ENSMUST00000141859.8	ENSMUSG00000020289.16	Nprl3	chr11	protein_coding	nitrogen permease regulator-like 3
chr11	32200278	32217505	-	32200278	32203875	A5SS&ES	0.25	50	50	ENSMUST00000141859.8	ENSMUSG00000020289.16	Nprl3	chr11	protein_coding	nitrogen permease regulator-like 3
chr11	32205568;32209255	32209217;32213025	-	32205568	32213025	cassetteExon	0.5	100	100	ENSMUST00000020530.12	ENSMUSG00000020289.16	Nprl3	chr11	protein_coding	nitrogen permease regulator-like 3
chr11	32200278	32217505	-	32200278	32205439	A5SS&ES	0.25	50	50	ENSMUST00000109389.9	ENSMUSG00000020289.16	Nprl3	chr11	protein_coding	nitrogen permease regulator-like 3
chr11	32200278	32205439	-	32200278	32203875	5pMXE	0.25	50	50	ENSMUST00000146890.8	ENSMUSG00000020289.16	Nprl3	chr11	protein_coding	nitrogen permease regulator-like 3
chr11	32200278	32213025	-	32200278	32203875	5pMXE	0.25	50	50	ENSMUST00000146890.8	ENSMUSG00000020289.16	Nprl3	chr11	protein_coding	nitrogen permease regulator-like 3
chr11	32200278;32213094	32213025;32217505	-	32200278	32217505	cassetteExon	0.5	100	100	ENSMUST00000149526.2	ENSMUSG00000020289.16	Nprl3	chr11	protein_coding	nitrogen permease regulator-like 3
chr11	32191935	32200125	-	32198226	32200125	3pMXE	0.5	50	50	ENSMUST00000127657.2	ENSMUSG00000020289.16	Nprl3	chr11	protein_coding	nitrogen permease regulator-like 3
chr11	32177949	32179849	+	32177949	32179247	A3SS&ES	0.5	50	50	ENSMUST00000142964.8	ENSMUSG00000020287.16	Mpg	chr11	protein_coding	N-methylpurine-DNA glycosylase
chr11	32179616	32179849	+	32179616	32179880	A3SS	0.5	50	50	ENSMUST00000142964.8	ENSMUSG00000020287.16	Mpg	chr11	protein_coding	N-methylpurine-DNA glycosylase
chr11	32177949;32179616	32179247;32179849	+	32177949	32179849	cassetteExon	0.5	100	100	ENSMUST00000020528.14	ENSMUSG00000020287.16	Mpg	chr11	protein_coding	N-methylpurine-DNA glycosylase
chr11	32227029	32227569	+	32226758	32227569	A5SS	0.5	50	50	ENSMUST00000020531.9	ENSMUSG00000055609.9	Hba-x	chr11	protein_coding	hemoglobin X, alpha-like embryonic chain in Hba complex
chr11	32357666;32359051	32358968;32361457	+	32357666	32361457	cassetteExon	0.5	100	100	ENSMUST00000038753.6	ENSMUSG00000040711.9	Sh3pxd2b	chr11	protein_coding	SH3 and PX domains 2B
chr11	32474540	32481979	-	32474540	32477385	5pMXE	0.5	50	50	ENSMUST00000054327.3	ENSMUSG00000044056.4	Efcab9	chr11	protein_coding	EF-hand calcium binding domain 9
chr11	32592935;32630302	32630201;32658188	+	32592935	32658188	cassetteExon	0.5	100	100	ENSMUST00000109366.8	ENSMUSG00000020271.18	Fbxw11	chr11	protein_coding	F-box and WD-40 domain protein 11
chr11	32592935;32630302	32630201;32661772	+	32592935;32658250	32658188;32661772	MXE	0.5	100	100	ENSMUST00000109366.8	ENSMUSG00000020271.18	Fbxw11	chr11	protein_coding	F-box and WD-40 domain protein 11
chr11	32592935	32602748	+	32592935	32658188	A3SS	0.33	50	50	ENSMUST00000109366.8	ENSMUSG00000020271.18	Fbxw11	chr11	protein_coding	F-box and WD-40 domain protein 11
chr11	32592935	32630201	+	32592935	32602748	3pMXE	0.33	50	50	ENSMUST00000137898.2	ENSMUSG00000020271.18	Fbxw11	chr11	protein_coding	F-box and WD-40 domain protein 11
chr11	32592935;32602904	32602748;32630201	+	32592935	32630201	cassetteExon	0.5	100	100	ENSMUST00000093205.13	ENSMUSG00000020271.18	Fbxw11	chr11	protein_coding	F-box and WD-40 domain protein 11
chr11	32630302;32658250	32658188;32661772	+	32630302	32661772	cassetteExon	0.5	100	100	ENSMUST00000093205.13	ENSMUSG00000020271.18	Fbxw11	chr11	protein_coding	F-box and WD-40 domain protein 11
chr11	32592935;32658250	32658188;32661772	+	32592935;32630302	32602748;32661772	MXE	0.5	100	100	ENSMUST00000143290.2	ENSMUSG00000020271.18	Fbxw11	chr11	protein_coding	F-box and WD-40 domain protein 11
chr11	32770691	32771852	-	32768601	32771852	A3SS	0.5	50	50	ENSMUST00000109365.8	ENSMUSG00000020270.10	Smim23	chr11	protein_coding	small integral membrane protein 23
chr11	33084383	33097045	-	33084383	33096695	5pMXE	0.5	50	50	ENSMUST00000109363.8	ENSMUSG00000057967.13	Fgf18	chr11	protein_coding	fibroblast growth factor 18
chr11	33106104	33106991	-	33106104;33106747	33106664;33106991	ES	0.5	50	50	ENSMUST00000075641.10	ENSMUSG00000057113.14	Npm1	chr11	protein_coding	nucleophosmin 1
chr11	33105220	33106003	-	33104060	33106003	A3SS	0.33	50	50	ENSMUST00000075641.10	ENSMUSG00000057113.14	Npm1	chr11	protein_coding	nucleophosmin 1
chr11	33105431	33106003	-	33104060	33106003	A3SS	0.33	50	50	ENSMUST00000075641.10	ENSMUSG00000057113.14	Npm1	chr11	protein_coding	nucleophosmin 1
chr11	33105431	33106003	-	33105220	33106003	A3SS	0.33	50	50	ENSMUST00000109354.10	ENSMUSG00000057113.14	Npm1	chr11	protein_coding	nucleophosmin 1
chr11	33279544;33287914	33287855;33391803	-	33279544	33391803	cassetteExon	0.5	100	100	ENSMUST00000102815.10	ENSMUSG00000040594.20	Ranbp17	chr11	protein_coding	RAN binding protein 17
chr11	33279544;33354199	33354038;33391803	-	33279544	33391803	cassetteExon	0.5	100	100	ENSMUST00000102815.10	ENSMUSG00000040594.20	Ranbp17	chr11	protein_coding	RAN binding protein 17
chr11	33279544	33279813	-	33279544	33391803	A5SS	0.25	50	50	ENSMUST00000102815.10	ENSMUSG00000040594.20	Ranbp17	chr11	protein_coding	RAN binding protein 17
chr11	33454828	33463047	-	33454828	33463602	A5SS	0.5	50	50	ENSMUST00000102815.10	ENSMUSG00000040594.20	Ranbp17	chr11	protein_coding	RAN binding protein 17
chr11	33279544;33354199	33354038;33391803	-	33279544;33287914	33287855;33391803	MXE	0.5	100	100	ENSMUST00000207401.2	ENSMUSG00000040594.20	Ranbp17	chr11	protein_coding	RAN binding protein 17
chr11	33279544	33279813	-	33279544	33287855	A5SS	0.25	50	50	ENSMUST00000207401.2	ENSMUSG00000040594.20	Ranbp17	chr11	protein_coding	RAN binding protein 17
chr11	33279544	33279813	-	33279544	33354038	A5SS	0.25	50	50	ENSMUST00000129179.8	ENSMUSG00000040594.20	Ranbp17	chr11	protein_coding	RAN binding protein 17
chr11	33523416;33524574	33524482;33528806	-	33523416	33528806	cassetteExon	0.5	100	100	ENSMUST00000020366.8	ENSMUSG00000020159.9	Gabrp	chr11	protein_coding	gamma-aminobutyric acid (GABA) A receptor, pi
chr11	33566282	33573025	+	33566282	33573375	A3SS	0.5	50	50	ENSMUST00000101371.3	ENSMUSG00000073052.5	D130052B06Rik	chr11	lncRNA	RIKEN cDNA D130052B06 gene
chr11	33565902	33566212	+	33549416	33566212	A5SS	0.5	50	50	ENSMUST00000101371.3	ENSMUSG00000073052.5	D130052B06Rik	chr11	lncRNA	RIKEN cDNA D130052B06 gene
chr11	33595627	33793130	-	33595815	33793130	A3SS	0.33	50	50	ENSMUST00000101368.9	ENSMUSG00000053519.18	Kcnip1	chr11	protein_coding	Kv channel-interacting protein 1
chr11	33601572	33793130	-	33595815	33793130	A3SS	0.33	50	50	ENSMUST00000101368.9	ENSMUSG00000053519.18	Kcnip1	chr11	protein_coding	Kv channel-interacting protein 1
chr11	33595627	33942749	-	33595627	33793130	5pMXE	0.25	50	50	ENSMUST00000065970.6	ENSMUSG00000053519.18	Kcnip1	chr11	protein_coding	Kv channel-interacting protein 1
chr11	33595627;33601572	33601540;33793130	-	33595627	33793130	cassetteExon	0.5	100	100	ENSMUST00000065970.6	ENSMUSG00000053519.18	Kcnip1	chr11	protein_coding	Kv channel-interacting protein 1
chr11	33595627	33630463	-	33595627	33793130	A5SS	0.25	50	50	ENSMUST00000065970.6	ENSMUSG00000053519.18	Kcnip1	chr11	protein_coding	Kv channel-interacting protein 1
chr11	33595627	33630463	-	33595627	33601540	A5SS&ES	0.33	50	50	ENSMUST00000109340.9	ENSMUSG00000053519.18	Kcnip1	chr11	protein_coding	Kv channel-interacting protein 1
chr11	33595627	33601540	-	33595627	33942749	A5SS	0.25	50	50	ENSMUST00000238903.2	ENSMUSG00000053519.18	Kcnip1	chr11	protein_coding	Kv channel-interacting protein 1
chr11	33595627	33630463	-	33595627	33942749	A5SS	0.25	50	50	ENSMUST00000238903.2	ENSMUSG00000053519.18	Kcnip1	chr11	protein_coding	Kv channel-interacting protein 1
chr11	34041647;34044422	34044292;34046752	-	34041647	34046752	cassetteExon	0.5	100	100	ENSMUST00000141450.2	ENSMUSG00000085684.3	4930469K13Rik	chr11	protein_coding	RIKEN cDNA 4930469K13 gene
chr11	34041474	34041560	-	34018229	34041560	A3SS	0.5	50	50	ENSMUST00000141450.2	ENSMUSG00000085684.3	4930469K13Rik	chr11	protein_coding	RIKEN cDNA 4930469K13 gene
chr11	34041647	34046752	-	34044422	34046752	3pMXE	0.5	50	50	ENSMUST00000224226.2	ENSMUSG00000085684.3	4930469K13Rik	chr11	protein_coding	RIKEN cDNA 4930469K13 gene
chr11	34578469	34580538	-	34578469;34579380	34579280;34580538	ES	0.5	50	50	ENSMUST00000093193.12	ENSMUSG00000020143.16	Dock2	chr11	protein_coding	dedicator of cyto-kinesis 2
chr11	34223296	34223669	-	34218104	34223669	A3SS	0.5	50	50	ENSMUST00000093193.12	ENSMUSG00000020143.16	Dock2	chr11	protein_coding	dedicator of cyto-kinesis 2
chr11	34313917	34388275	-	34262557	34388275	A3SS	0.5	50	50	ENSMUST00000093193.12	ENSMUSG00000020143.16	Dock2	chr11	protein_coding	dedicator of cyto-kinesis 2
chr11	34578469	34580538	-	34578469	34579280	5pMXE	0.5	50	50	ENSMUST00000101364.3	ENSMUSG00000020143.16	Dock2	chr11	protein_coding	dedicator of cyto-kinesis 2
chr11	34713295	34713387	-	34713299	34713387	A3SS	0.5	50	50	ENSMUST00000093191.3	ENSMUSG00000069910.3	Spdl1	chr11	protein_coding	spindle apparatus coiled-coil protein 1
chr11	35399121	35400660	+	35399121	35435556	A3SS	0.5	50	50	ENSMUST00000069837.4	ENSMUSG00000056427.11	Slit3	chr11	protein_coding	slit guidance ligand 3
chr11	35719640;35723490	35723398;35723999	-	35719640	35723999	cassetteExon	0.5	100	100	ENSMUST00000018992.4	ENSMUSG00000018848.5	Rars	chr11	protein_coding	arginyl-tRNA synthetase
chr11	36032510	36054546	-	36032510;36038036	36037842;36054546	ES	0.5	50	50	ENSMUST00000102801.8	ENSMUSG00000049336.17	Tenm2	chr11	protein_coding	teneurin transmembrane protein 2
chr11	36835068;36848787	36848698;37036355	-	36835068	37036355	cassetteExon	0.5	100	100	ENSMUST00000102801.8	ENSMUSG00000049336.17	Tenm2	chr11	protein_coding	teneurin transmembrane protein 2
chr11	36030588	36032310	-	36030585	36032310	A3SS	0.5	50	50	ENSMUST00000102801.8	ENSMUSG00000049336.17	Tenm2	chr11	protein_coding	teneurin transmembrane protein 2
chr11	36276155	36322970	-	36276155	36755495	A5SS	0.25	50	50	ENSMUST00000102801.8	ENSMUSG00000049336.17	Tenm2	chr11	protein_coding	teneurin transmembrane protein 2
chr11	36276155	36385814	-	36276155	36755495	A5SS	0.25	50	50	ENSMUST00000102801.8	ENSMUSG00000049336.17	Tenm2	chr11	protein_coding	teneurin transmembrane protein 2
chr11	36276155	36568296	-	36276155	36755495	A5SS	0.25	50	50	ENSMUST00000102801.8	ENSMUSG00000049336.17	Tenm2	chr11	protein_coding	teneurin transmembrane protein 2
chr11	36276155	36322970	-	36276155	36568296	A5SS	0.25	50	50	ENSMUST00000149787.8	ENSMUSG00000049336.17	Tenm2	chr11	protein_coding	teneurin transmembrane protein 2
chr11	36276155	36385814	-	36276155	36568296	A5SS	0.25	50	50	ENSMUST00000149787.8	ENSMUSG00000049336.17	Tenm2	chr11	protein_coding	teneurin transmembrane protein 2
chr11	36276155	36322970	-	36276155	36385814	A5SS	0.25	50	50	ENSMUST00000155147.2	ENSMUSG00000049336.17	Tenm2	chr11	protein_coding	teneurin transmembrane protein 2
chr11	40578622	40585630	-	40578622	40583305	5pMXE	0.5	50	50	ENSMUST00000040167.11	ENSMUSG00000042032.14	Mat2b	chr11	protein_coding	methionine adenosyltransferase II, beta
chr11	40576140	40578428	-	40576168	40578428	A3SS	0.5	50	50	ENSMUST00000040167.11	ENSMUSG00000042032.14	Mat2b	chr11	protein_coding	methionine adenosyltransferase II, beta
chr11	40626893	40627395	+	40626893	40627320	A3SS	0.5	50	50	ENSMUST00000020578.11	ENSMUSG00000020328.11	Nudcd2	chr11	protein_coding	NudC domain containing 2
chr11	40625082	40626845	+	40624981	40626845	A5SS	0.5	50	50	ENSMUST00000020578.11	ENSMUSG00000020328.11	Nudcd2	chr11	protein_coding	NudC domain containing 2
chr11	41846043	41851834	+	41846043;41846626	41846478;41851834	ES	0.5	50	50	ENSMUST00000155032.8	ENSMUSG00000087306.8	A230004M16Rik	chr11	lncRNA	RIKEN cDNA A230004M16 gene
chr11	41854035	41862535	+	41854035	41858454	3pMXE	0.33	50	50	ENSMUST00000155032.8	ENSMUSG00000087306.8	A230004M16Rik	chr11	lncRNA	RIKEN cDNA A230004M16 gene
chr11	41854035	41857788	+	41854035	41858454	A3SS	0.33	50	50	ENSMUST00000155032.8	ENSMUSG00000087306.8	A230004M16Rik	chr11	lncRNA	RIKEN cDNA A230004M16 gene
chr11	41775562	41776371	+	41695259	41776371	A5SS	0.5	50	50	ENSMUST00000155032.8	ENSMUSG00000087306.8	A230004M16Rik	chr11	lncRNA	RIKEN cDNA A230004M16 gene
chr11	41776507	41845965	+	41776507	41845964	A3SS	0.5	50	50	ENSMUST00000125365.2	ENSMUSG00000087306.8	A230004M16Rik	chr11	lncRNA	RIKEN cDNA A230004M16 gene
chr11	41854035	41857788	+	41854035	41862535	A3SS	0.33	50	50	ENSMUST00000125365.2	ENSMUSG00000087306.8	A230004M16Rik	chr11	lncRNA	RIKEN cDNA A230004M16 gene
chr11	41803418;41804820	41804797;41807111	-	41803418	41807111	cassetteExon	0.5	100	100	ENSMUST00000070725.11	ENSMUSG00000020436.18	Gabrg2	chr11	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
chr11	42070475	42072993	-	42070475	42072869	5pMXE	0.33	50	50	ENSMUST00000205546.2	ENSMUSG00000010803.14	Gabra1	chr11	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
chr11	42070466	42072869	-	42070475	42072869	A3SS	0.5	50	50	ENSMUST00000205546.2	ENSMUSG00000010803.14	Gabra1	chr11	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
chr11	42070475	42070586	-	42070475	42072869	A5SS	0.33	50	50	ENSMUST00000205546.2	ENSMUSG00000010803.14	Gabra1	chr11	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
chr11	42070324	42072993	-	42070475	42072993	A3SS&ES	0.5	50	50	ENSMUST00000020707.12	ENSMUSG00000010803.14	Gabra1	chr11	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
chr11	42070475	42070586	-	42070475	42072993	A5SS	0.33	50	50	ENSMUST00000020707.12	ENSMUSG00000010803.14	Gabra1	chr11	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
chr11	42073216	42073628	-	42073216	42073701	A5SS	0.5	50	50	ENSMUST00000132971.3	ENSMUSG00000010803.14	Gabra1	chr11	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
chr11	42208605	42210495	-	42208575	42210495	A3SS	0.5	50	50	ENSMUST00000020703.13	ENSMUSG00000020428.14	Gabra6	chr11	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6
chr11	42211329	42211670	-	42211329	42211558	A5SS	0.5	50	50	ENSMUST00000020703.13	ENSMUSG00000020428.14	Gabra6	chr11	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6
chr11	42310861	42312379	+	42310861;42312253	42312028;42312379	ES	0.5	50	50	ENSMUST00000007797.10	ENSMUSG00000007653.13	Gabrb2	chr11	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit beta 2
chr11	42488612;42493055	42492942;42517371	+	42488612	42517371	cassetteExon	0.5	100	100	ENSMUST00000007797.10	ENSMUSG00000007653.13	Gabrb2	chr11	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit beta 2
chr11	42310861	42312379	+	42312253	42312379	5pMXE	0.5	50	50	ENSMUST00000136050.8	ENSMUSG00000007653.13	Gabrb2	chr11	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit beta 2
chr11	43047107	43063537	+	43047107	43049424	3pMXE	0.5	50	50	ENSMUST00000148911.2	ENSMUSG00000055415.9	Atp10b	chr11	protein_coding	ATPase, class V, type 10B
chr11	43044245	43045079	+	43044245	43063537	A3SS	0.5	50	50	ENSMUST00000077659.6	ENSMUSG00000055415.9	Atp10b	chr11	protein_coding	ATPase, class V, type 10B
chr11	43047107	43063537	+	43044245	43063537	A5SS	0.5	50	50	ENSMUST00000077659.6	ENSMUSG00000055415.9	Atp10b	chr11	protein_coding	ATPase, class V, type 10B
chr11	43312084	43313720	-	43312092	43313720	A3SS	0.5	50	50	ENSMUST00000020687.15	ENSMUSG00000020415.17	Pttg1	chr11	protein_coding	pituitary tumor-transforming gene 1
chr11	43311235	43311855	-	43311235	43311934	A5SS	0.5	50	50	ENSMUST00000020687.15	ENSMUSG00000020415.17	Pttg1	chr11	protein_coding	pituitary tumor-transforming gene 1
chr11	43316508	43317001	-	43316508	43317028	A5SS	0.33	50	50	ENSMUST00000020687.15	ENSMUSG00000020415.17	Pttg1	chr11	protein_coding	pituitary tumor-transforming gene 1
chr11	43316508	43317016	-	43316508	43317028	A5SS	0.33	50	50	ENSMUST00000020687.15	ENSMUSG00000020415.17	Pttg1	chr11	protein_coding	pituitary tumor-transforming gene 1
chr11	43316508	43317016	-	43316508	43317001	A5SS	0.33	50	50	ENSMUST00000101340.11	ENSMUSG00000020415.17	Pttg1	chr11	protein_coding	pituitary tumor-transforming gene 1
chr11	43324646	43328172	+	43324646;43326038	43325881;43328172	ES	0.33	50	50	ENSMUST00000126128.8	ENSMUSG00000020409.11	Slu7	chr11	protein_coding	SLU7 splicing factor homolog (S. cerevisiae)
chr11	43324646;43327259	43327181;43328172	+	43324646;43326038	43325881;43328172	MXE	0.5	100	100	ENSMUST00000126128.8	ENSMUSG00000020409.11	Slu7	chr11	protein_coding	SLU7 splicing factor homolog (S. cerevisiae)
chr11	43324646	43328172	+	43324646;43327259	43327181;43328172	ES	0.33	50	50	ENSMUST00000151880.8	ENSMUSG00000020409.11	Slu7	chr11	protein_coding	SLU7 splicing factor homolog (S. cerevisiae)
chr11	43329711	43329848	+	43329711	43329980	A3SS	0.5	50	50	ENSMUST00000151880.8	ENSMUSG00000020409.11	Slu7	chr11	protein_coding	SLU7 splicing factor homolog (S. cerevisiae)
chr11	43365214;43371796	43371723;43376648	+	43365214	43376648	cassetteExon	0.5	100	100	ENSMUST00000173002.8	ENSMUSG00000046491.11	C1qtnf2	chr11	protein_coding	C1q and tumor necrosis factor related protein 2
chr11	43365214	43376648	+	43371796	43376648	5pMXE	0.5	50	50	ENSMUST00000151912.2	ENSMUSG00000046491.11	C1qtnf2	chr11	protein_coding	C1q and tumor necrosis factor related protein 2
chr11	43573443	43574308	+	43573443	43595361	A3SS	0.5	50	50	ENSMUST00000061070.6	ENSMUSG00000044950.8	Pwwp2a	chr11	protein_coding	PWWP domain containing 2A
chr11	43575052	43595361	+	43573443	43595361	A5SS	0.5	50	50	ENSMUST00000061070.6	ENSMUSG00000044950.8	Pwwp2a	chr11	protein_coding	PWWP domain containing 2A
chr11	43596304	43611048	+	43596304;43607976	43607857;43611048	ES	0.33	50	50	ENSMUST00000094294.5	ENSMUSG00000044950.8	Pwwp2a	chr11	protein_coding	PWWP domain containing 2A
chr11	43608667	43611048	+	43607976	43611048	A5SS	0.33	50	50	ENSMUST00000094294.5	ENSMUSG00000044950.8	Pwwp2a	chr11	protein_coding	PWWP domain containing 2A
chr11	43608667	43611048	+	43596304	43611048	A5SS	0.33	50	50	ENSMUST00000129229.2	ENSMUSG00000044950.8	Pwwp2a	chr11	protein_coding	PWWP domain containing 2A
chr11	43621434	43627246	-	43621434	43627242	A5SS	0.5	50	50	ENSMUST00000109278.8	ENSMUSG00000041278.11	Ttc1	chr11	protein_coding	tetratricopeptide repeat domain 1
chr11	43727687	43791921	-	43727687;43735213	43735064;43791921	ES	0.5	50	50	ENSMUST00000067258.9	ENSMUSG00000050541.15	Adra1b	chr11	protein_coding	adrenergic receptor, alpha 1b
chr11	44290945	44294864	+	44291051	44294864	A5SS	0.5	50	50	ENSMUST00000170513.3	ENSMUSG00000004296.15	Il12b	chr11	protein_coding	interleukin 12b
chr11	44410101	44415130	+	44410101	44415755	A3SS	0.5	50	50	ENSMUST00000019333.10	ENSMUSG00000019189.14	Rnf145	chr11	protein_coding	ring finger protein 145
chr11	44410495	44415755	+	44410101	44415755	A5SS	0.33	50	50	ENSMUST00000019333.10	ENSMUSG00000019189.14	Rnf145	chr11	protein_coding	ring finger protein 145
chr11	44411325	44415755	+	44410101	44415755	A5SS	0.33	50	50	ENSMUST00000019333.10	ENSMUSG00000019189.14	Rnf145	chr11	protein_coding	ring finger protein 145
chr11	44411325	44415755	+	44410495	44415755	A5SS	0.33	50	50	ENSMUST00000101327.3	ENSMUSG00000019189.14	Rnf145	chr11	protein_coding	ring finger protein 145
chr11	44512176	44512748	+	44512057	44512748	A5SS	0.5	50	50	ENSMUST00000109268.2	ENSMUSG00000057098.15	Ebf1	chr11	protein_coding	early B cell factor 1
chr11	44774782	44798731	+	44774758	44798731	A5SS	0.5	50	50	ENSMUST00000109268.2	ENSMUSG00000057098.15	Ebf1	chr11	protein_coding	early B cell factor 1
chr11	44803106	44815276	+	44798864	44815276	A5SS	0.5	50	50	ENSMUST00000109268.2	ENSMUSG00000057098.15	Ebf1	chr11	protein_coding	early B cell factor 1
chr11	44774782	44798734	+	44774782	44798731	A3SS	0.5	50	50	ENSMUST00000101326.10	ENSMUSG00000057098.15	Ebf1	chr11	protein_coding	early B cell factor 1
chr11	45785956	45797008	+	45785956;45793112	45793038;45797008	ES	0.5	50	50	ENSMUST00000109261.11	ENSMUSG00000006169.21	Clint1	chr11	protein_coding	clathrin interactor 1
chr11	45797294	45798721	+	45797294	45798667	A3SS	0.5	50	50	ENSMUST00000109261.11	ENSMUSG00000006169.21	Clint1	chr11	protein_coding	clathrin interactor 1
chr11	45845321	45846104	-	45845321	45845947	5pMXE	0.33	50	50	ENSMUST00000109254.2	ENSMUSG00000011254.17	Thg1l	chr11	protein_coding	tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
chr11	45845321;45845503	45845435;45845947	-	45845321	45845947	cassetteExon	0.5	100	100	ENSMUST00000109254.2	ENSMUSG00000011254.17	Thg1l	chr11	protein_coding	tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
chr11	45845059	45845219	-	45845059	45846102	A5SS	0.5	50	50	ENSMUST00000011398.13	ENSMUSG00000011254.17	Thg1l	chr11	protein_coding	tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
chr11	45845321	45845435	-	45845321	45846104	A5SS	0.33	50	50	ENSMUST00000131182.2	ENSMUSG00000011254.17	Thg1l	chr11	protein_coding	tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
chr11	45947037;45947268	45947126;45951750	+	45947037	45951750	cassetteExon	0.5	100	100	ENSMUST00000011400.8	ENSMUSG00000011256.17	Adam19	chr11	protein_coding	a disintegrin and metallopeptidase domain 19 (meltrin beta)
chr11	46019014	46019613	+	46018250	46019613	A5SS	0.5	50	50	ENSMUST00000011400.8	ENSMUSG00000011256.17	Adam19	chr11	protein_coding	a disintegrin and metallopeptidase domain 19 (meltrin beta)
chr11	46182479	46203318	-	46182479	46202762	5pMXE	0.33	50	50	ENSMUST00000165599.9	ENSMUSG00000020340.17	Cyfip2	chr11	protein_coding	cytoplasmic FMR1 interacting protein 2
chr11	46148529;46149577	46149503;46151627	-	46148529	46151627	cassetteExon	0.5	100	100	ENSMUST00000165599.9	ENSMUSG00000020340.17	Cyfip2	chr11	protein_coding	cytoplasmic FMR1 interacting protein 2
chr11	46182479	46203054	-	46182479	46202762	A5SS	0.33	50	50	ENSMUST00000165599.9	ENSMUSG00000020340.17	Cyfip2	chr11	protein_coding	cytoplasmic FMR1 interacting protein 2
chr11	46182479	46203054	-	46182479	46203318	A5SS	0.33	50	50	ENSMUST00000093165.12	ENSMUSG00000020340.17	Cyfip2	chr11	protein_coding	cytoplasmic FMR1 interacting protein 2
chr11	46235674	46238698	-	46233307	46238698	A3SS	0.5	50	50	ENSMUST00000109237.9	ENSMUSG00000020395.14	Itk	chr11	protein_coding	IL2 inducible T cell kinase
chr11	46256884	46258658	-	46256902	46258658	A3SS	0.5	50	50	ENSMUST00000109237.9	ENSMUSG00000020395.14	Itk	chr11	protein_coding	IL2 inducible T cell kinase
chr11	46296253	46297322	+	46292171	46297322	A5SS	0.5	50	50	ENSMUST00000139280.2	ENSMUSG00000020401.7	Fam71b	chr11	protein_coding	family with sequence similarity 71, member B
chr11	46327836;46330651	46330633;46331390	+	46327836	46331390	cassetteExon	0.5	100	100	ENSMUST00000152119.2	ENSMUSG00000020397.16	Med7	chr11	protein_coding	mediator complex subunit 7
chr11	46327836;46330802	46330633;46331390	+	46327836	46331390	cassetteExon	0.5	100	100	ENSMUST00000152119.2	ENSMUSG00000020397.16	Med7	chr11	protein_coding	mediator complex subunit 7
chr11	46328018	46331390	+	46327836	46331390	A5SS	0.25	50	50	ENSMUST00000152119.2	ENSMUSG00000020397.16	Med7	chr11	protein_coding	mediator complex subunit 7
chr11	46330651	46331390	+	46330651;46330802	46330754;46331390	ES	0.25	50	50	ENSMUST00000140027.8	ENSMUSG00000020397.16	Med7	chr11	protein_coding	mediator complex subunit 7
chr11	46328018	46330633	+	46327836	46330633	A5SS	0.33	50	50	ENSMUST00000140027.8	ENSMUSG00000020397.16	Med7	chr11	protein_coding	mediator complex subunit 7
chr11	46328018	46331390	+	46330802	46331390	A5SS&ES	0.25	50	50	ENSMUST00000140027.8	ENSMUSG00000020397.16	Med7	chr11	protein_coding	mediator complex subunit 7
chr11	46328139	46330633	+	46327836	46330633	A5SS	0.33	50	50	ENSMUST00000140027.8	ENSMUSG00000020397.16	Med7	chr11	protein_coding	mediator complex subunit 7
chr11	46330651	46331390	+	46330802	46331390	A5SS	0.25	50	50	ENSMUST00000020665.13	ENSMUSG00000020397.16	Med7	chr11	protein_coding	mediator complex subunit 7
chr11	46328018;46330651	46330633;46331390	+	46328018	46331390	cassetteExon	0.5	100	100	ENSMUST00000170928.8	ENSMUSG00000020397.16	Med7	chr11	protein_coding	mediator complex subunit 7
chr11	46328018;46330802	46330633;46331390	+	46328018	46331390	cassetteExon	0.5	100	100	ENSMUST00000170928.8	ENSMUSG00000020397.16	Med7	chr11	protein_coding	mediator complex subunit 7
chr11	46327836	46331390	+	46330651	46331390	A5SS&ES	0.25	50	50	ENSMUST00000109231.2	ENSMUSG00000020397.16	Med7	chr11	protein_coding	mediator complex subunit 7
chr11	46328139	46330633	+	46328018	46330633	A5SS	0.33	50	50	ENSMUST00000109231.2	ENSMUSG00000020397.16	Med7	chr11	protein_coding	mediator complex subunit 7
chr11	46327836	46331390	+	46330802	46331390	A5SS&ES	0.25	50	50	ENSMUST00000109232.4	ENSMUSG00000020397.16	Med7	chr11	protein_coding	mediator complex subunit 7
chr11	46439288	46441206	+	46439288	46445107	A3SS	0.5	50	50	ENSMUST00000150895.2	ENSMUSG00000086981.4	Gm12171	chr11	lncRNA	predicted gene 12171
chr11	46516452	46520052	-	46516452;46517831	46517746;46520052	ES	0.5	50	50	ENSMUST00000077173.13	ENSMUSG00000064010.13	Dppa1	chr11	protein_coding	developmental pluripotency associated 1
chr11	46580365	46589370	-	46580365	46581124	5pMXE	0.33	50	50	ENSMUST00000169584.8	ENSMUSG00000040413.16	Timd2	chr11	protein_coding	T cell immunoglobulin and mucin domain containing 2
chr11	46580365	46597762	-	46580365	46581124	5pMXE	0.33	50	50	ENSMUST00000169584.8	ENSMUSG00000040413.16	Timd2	chr11	protein_coding	T cell immunoglobulin and mucin domain containing 2
chr11	46580365	46597762	-	46580365	46589370	5pMXE	0.33	50	50	ENSMUST00000109225.9	ENSMUSG00000040413.16	Timd2	chr11	protein_coding	T cell immunoglobulin and mucin domain containing 2
chr11	46580365;46589435	46589370;46597762	-	46580365	46597762	cassetteExon	0.5	100	100	ENSMUST00000055102.13	ENSMUSG00000040413.16	Timd2	chr11	protein_coding	T cell immunoglobulin and mucin domain containing 2
chr11	46631094	46641995	+	46625957	46641995	A5SS	0.33	50	50	ENSMUST00000109224.9	ENSMUSG00000040405.14	Havcr1	chr11	protein_coding	hepatitis A virus cellular receptor 1
chr11	46641498	46641995	+	46625957	46641995	A5SS	0.33	50	50	ENSMUST00000109224.9	ENSMUSG00000040405.14	Havcr1	chr11	protein_coding	hepatitis A virus cellular receptor 1
chr11	46647114;46657536	46657468;46661318	+	46647114	46661318	cassetteExon	0.5	100	100	ENSMUST00000081819.11	ENSMUSG00000040405.14	Havcr1	chr11	protein_coding	hepatitis A virus cellular receptor 1
chr11	46641498	46641995	+	46631094	46641995	A5SS	0.33	50	50	ENSMUST00000081819.11	ENSMUSG00000040405.14	Havcr1	chr11	protein_coding	hepatitis A virus cellular receptor 1
chr11	46871761	46973606	-	46788796	46973606	A3SS	0.5	50	50	ENSMUST00000109220.8	ENSMUSG00000020354.16	Sgcd	chr11	protein_coding	sarcoglycan, delta (dystrophin-associated glycoprotein)
chr11	47246200	47270081	-	47246200	47469632	A5SS	0.5	50	50	ENSMUST00000109220.8	ENSMUSG00000020354.16	Sgcd	chr11	protein_coding	sarcoglycan, delta (dystrophin-associated glycoprotein)
chr11	48694062	48694231	+	48693247	48694231	A5SS	0.5	50	50	ENSMUST00000139959.8	ENSMUSG00000020372.16	Rack1	chr11	protein_coding	receptor for activated C kinase 1
chr11	48700107	48706670	-	48700107;48703222	48703127;48706670	ES	0.5	50	50	ENSMUST00000047145.14	ENSMUSG00000040365.15	Trim41	chr11	protein_coding	tripartite motif-containing 41
chr11	48700107	48706670	-	48700107	48703127	5pMXE	0.5	50	50	ENSMUST00000131888.8	ENSMUSG00000040365.15	Trim41	chr11	protein_coding	tripartite motif-containing 41
chr11	48729759	48736263	+	48729759	48736259	A3SS	0.5	50	50	ENSMUST00000109213.9	ENSMUSG00000040350.17	Trim7	chr11	protein_coding	tripartite motif-containing 7
chr11	48728872	48729664	+	48717106	48729664	A5SS	0.33	50	50	ENSMUST00000109213.9	ENSMUSG00000040350.17	Trim7	chr11	protein_coding	tripartite motif-containing 7
chr11	48729452	48729664	+	48717106	48729664	A5SS	0.33	50	50	ENSMUST00000109213.9	ENSMUSG00000040350.17	Trim7	chr11	protein_coding	tripartite motif-containing 7
chr11	48729452	48729664	+	48728872	48729664	A5SS	0.33	50	50	ENSMUST00000046903.6	ENSMUSG00000040350.17	Trim7	chr11	protein_coding	tripartite motif-containing 7
chr11	48757830	48761921	-	48756036	48761921	A3SS	0.33	50	50	ENSMUST00000147151.2	ENSMUSG00000046879.8	Irgm1	chr11	protein_coding	immunity-related GTPase family M member 1
chr11	48759607	48761921	-	48756036	48761921	A3SS	0.33	50	50	ENSMUST00000147151.2	ENSMUSG00000046879.8	Irgm1	chr11	protein_coding	immunity-related GTPase family M member 1
chr11	48757830	48761921	-	48757830;48759607	48759389;48761921	ES	0.5	50	50	ENSMUST00000049519.4	ENSMUSG00000046879.8	Irgm1	chr11	protein_coding	immunity-related GTPase family M member 1
chr11	48786394	48792688	-	48791217	48792688	A3SS&ES	0.5	50	50	ENSMUST00000109210.8	ENSMUSG00000058163.15	Gm5431	chr11	protein_coding	predicted gene 5431
chr11	48807211	48882831	-	48807211	48817754	5pMXE	0.5	50	50	ENSMUST00000094476.9	ENSMUSG00000048852.14	Gm12185	chr11	protein_coding	predicted gene 12185
chr11	48808938	48817754	-	48807211	48817754	A3SS	0.5	50	50	ENSMUST00000094476.9	ENSMUSG00000048852.14	Gm12185	chr11	protein_coding	predicted gene 12185
chr11	48878721	48882831	-	48807211	48882831	A3SS	0.5	50	50	ENSMUST00000059930.3	ENSMUSG00000048852.14	Gm12185	chr11	protein_coding	predicted gene 12185
chr11	48870014	48870131	-	48870014	48870127	A5SS	0.5	50	50	ENSMUST00000097494.9	ENSMUSG00000069893.11	9930111J21Rik1	chr11	protein_coding	RIKEN cDNA 9930111J21 gene 1
chr11	49018756;49021373	49021158;49025115	+	49018756	49025115	cassetteExon	0.5	100	100	ENSMUST00000056759.11	ENSMUSG00000040328.17	Olfr56	chr11	protein_coding	olfactory receptor 56
chr11	48977971	48982587	+	48977971	49008448	A3SS	0.2	50	50	ENSMUST00000056759.11	ENSMUSG00000040328.17	Olfr56	chr11	protein_coding	olfactory receptor 56
chr11	48977971	48985396	+	48977971	49008448	A3SS	0.2	50	50	ENSMUST00000056759.11	ENSMUSG00000040328.17	Olfr56	chr11	protein_coding	olfactory receptor 56
chr11	48977971	48986216	+	48977971	49008448	A3SS	0.2	50	50	ENSMUST00000056759.11	ENSMUSG00000040328.17	Olfr56	chr11	protein_coding	olfactory receptor 56
chr11	48977971	49015111	+	48977971	49008448	A3SS&ES	0.2	50	50	ENSMUST00000056759.11	ENSMUSG00000040328.17	Olfr56	chr11	protein_coding	olfactory receptor 56
chr11	48941661	48977861	+	48869817	48977861	A5SS	0.33	50	50	ENSMUST00000056759.11	ENSMUSG00000040328.17	Olfr56	chr11	protein_coding	olfactory receptor 56
chr11	48967489	48977861	+	48869817	48977861	A5SS	0.33	50	50	ENSMUST00000056759.11	ENSMUSG00000040328.17	Olfr56	chr11	protein_coding	olfactory receptor 56
chr11	49008941	49015111	+	49008941	49018629	A3SS	0.5	50	50	ENSMUST00000179282.8	ENSMUSG00000040328.17	Olfr56	chr11	protein_coding	olfactory receptor 56
chr11	48977971	49015111	+	48977971;49008941	49008448;49015111	ES	0.5	50	50	ENSMUST00000102785.4	ENSMUSG00000040328.17	Olfr56	chr11	protein_coding	olfactory receptor 56
chr11	48967489	48977861	+	48941661	48977861	A5SS	0.33	50	50	ENSMUST00000102785.4	ENSMUSG00000040328.17	Olfr56	chr11	protein_coding	olfactory receptor 56
chr11	49015366	49018662	+	49015138	49018662	A5SS	0.5	50	50	ENSMUST00000102785.4	ENSMUSG00000040328.17	Olfr56	chr11	protein_coding	olfactory receptor 56
chr11	49015366	49018662	+	49015366	49025000	A3SS	0.5	50	50	ENSMUST00000203810.3	ENSMUSG00000040328.17	Olfr56	chr11	protein_coding	olfactory receptor 56
chr11	49021373	49025000	+	49015366	49025000	A5SS	0.5	50	50	ENSMUST00000203810.3	ENSMUSG00000040328.17	Olfr56	chr11	protein_coding	olfactory receptor 56
chr11	48977971	48982587	+	48977971	49015111	A3SS	0.2	50	50	ENSMUST00000203149.3	ENSMUSG00000040328.17	Olfr56	chr11	protein_coding	olfactory receptor 56
chr11	48977971	48985396	+	48977971	49015111	A3SS	0.2	50	50	ENSMUST00000203149.3	ENSMUSG00000040328.17	Olfr56	chr11	protein_coding	olfactory receptor 56
chr11	48977971	48986216	+	48977971	49015111	A3SS	0.2	50	50	ENSMUST00000203149.3	ENSMUSG00000040328.17	Olfr56	chr11	protein_coding	olfactory receptor 56
chr11	49018756	49025115	+	49018756	49021158	A3SS&ES	0.5	50	50	ENSMUST00000203149.3	ENSMUSG00000040328.17	Olfr56	chr11	protein_coding	olfactory receptor 56
chr11	49021373	49025115	+	49021373	49025000	A3SS	0.5	50	50	ENSMUST00000203149.3	ENSMUSG00000040328.17	Olfr56	chr11	protein_coding	olfactory receptor 56
chr11	49018756	49025115	+	49021373	49025115	5pMXE	0.5	50	50	ENSMUST00000239127.2	ENSMUSG00000040328.17	Olfr56	chr11	protein_coding	olfactory receptor 56
chr11	48882979	48883537	-	48882979	48884799	A5SS	0.5	50	50	ENSMUST00000146439.8	ENSMUSG00000078922.10	Tgtp1	chr11	protein_coding	T cell specific GTPase 1
chr11	48941858	48941975	-	48941858	48941971	A5SS	0.5	50	50	ENSMUST00000101295.9	ENSMUSG00000069892.10	9930111J21Rik2	chr11	protein_coding	RIKEN cDNA 9930111J21 gene 2
chr11	48950853	48954790	-	48950588	48954790	A3SS	0.5	50	50	ENSMUST00000046745.7	ENSMUSG00000078921.4	Tgtp2	chr11	protein_coding	T cell specific GTPase 2
chr11	48977971;48982796	48982587;48986216	+	48977971	48986216	cassetteExon	0.5	100	100	ENSMUST00000109202.3	ENSMUSG00000078920.4	Ifi47	chr11	protein_coding	interferon gamma inducible protein 47
chr11	48977971;48985445	48985396;48986216	+	48977971	48986216	cassetteExon	0.5	100	100	ENSMUST00000109202.3	ENSMUSG00000078920.4	Ifi47	chr11	protein_coding	interferon gamma inducible protein 47
chr11	48979196	48986216	+	48977971	48986216	A5SS	0.25	50	50	ENSMUST00000109202.3	ENSMUSG00000078920.4	Ifi47	chr11	protein_coding	interferon gamma inducible protein 47
chr11	48977971;48985445	48985396;48986216	+	48977971;48982796	48982587;48986216	MXE	0.5	100	100	ENSMUST00000152914.2	ENSMUSG00000078920.4	Ifi47	chr11	protein_coding	interferon gamma inducible protein 47
chr11	48979196	48986216	+	48982796	48986216	A5SS&ES	0.25	50	50	ENSMUST00000152914.2	ENSMUSG00000078920.4	Ifi47	chr11	protein_coding	interferon gamma inducible protein 47
chr11	48979196	48986216	+	48985445	48986216	A5SS&ES	0.25	50	50	ENSMUST00000214804.2	ENSMUSG00000078920.4	Ifi47	chr11	protein_coding	interferon gamma inducible protein 47
chr11	49004574;49005149	49005135;49005246	-	49004574	49005246	cassetteExon	0.5	100	100	ENSMUST00000060398.3	ENSMUSG00000047511.7	Olfr1396	chr11	protein_coding	olfactory receptor 1396
chr11	49005376	49005649	-	49005376	49005653	A5SS	0.5	50	50	ENSMUST00000060398.3	ENSMUSG00000047511.7	Olfr1396	chr11	protein_coding	olfactory receptor 1396
chr11	49033769;49038536	49038436;49039067	+	49033769	49039067	cassetteExon	0.5	100	100	ENSMUST00000203377.4	ENSMUSG00000050763.5	Olfr1395	chr11	protein_coding	olfactory receptor 1395
chr11	49064065	49065653	-	49064065;49064300	49064280;49065653	ES	0.5	50	50	ENSMUST00000046522.13	ENSMUSG00000040283.15	Btnl9	chr11	protein_coding	butyrophilin-like 9
chr11	49066523	49071368	-	49066523;49069823	49069542;49071368	ES	0.5	50	50	ENSMUST00000046522.13	ENSMUSG00000040283.15	Btnl9	chr11	protein_coding	butyrophilin-like 9
chr11	49066523;49066883	49066581;49069542	-	49066523	49069542	cassetteExon	0.5	100	100	ENSMUST00000046522.13	ENSMUSG00000040283.15	Btnl9	chr11	protein_coding	butyrophilin-like 9
chr11	49060491	49061424	-	49060518	49061424	A3SS	0.5	50	50	ENSMUST00000046522.13	ENSMUSG00000040283.15	Btnl9	chr11	protein_coding	butyrophilin-like 9
chr11	49073549	49073793	-	49071715	49073793	A3SS	0.5	50	50	ENSMUST00000046522.13	ENSMUSG00000040283.15	Btnl9	chr11	protein_coding	butyrophilin-like 9
chr11	49066523	49066581	-	49066523	49071368	A5SS	0.33	50	50	ENSMUST00000153999.3	ENSMUSG00000040283.15	Btnl9	chr11	protein_coding	butyrophilin-like 9
chr11	49103603	49105891	+	49103603;49104469	49104417;49105891	ES	0.25	50	50	ENSMUST00000109198.8	ENSMUSG00000046311.14	Zfp62	chr11	protein_coding	zinc finger protein 62
chr11	49094365;49094995	49094823;49103522	+	49094365	49103522	cassetteExon	0.5	100	100	ENSMUST00000109198.8	ENSMUSG00000046311.14	Zfp62	chr11	protein_coding	zinc finger protein 62
chr11	49094365;49095302	49094823;49103522	+	49094365	49103522	cassetteExon	0.5	100	100	ENSMUST00000109198.8	ENSMUSG00000046311.14	Zfp62	chr11	protein_coding	zinc finger protein 62
chr11	49104469;49105481	49105050;49105891	+	49104469	49105891	cassetteExon	0.5	100	100	ENSMUST00000109198.8	ENSMUSG00000046311.14	Zfp62	chr11	protein_coding	zinc finger protein 62
chr11	49104469;49105481	49105353;49105891	+	49104469	49105891	cassetteExon	0.5	100	100	ENSMUST00000109198.8	ENSMUSG00000046311.14	Zfp62	chr11	protein_coding	zinc finger protein 62
chr11	49104469;49105481	49105382;49105891	+	49104469	49105891	cassetteExon	0.5	100	100	ENSMUST00000109198.8	ENSMUSG00000046311.14	Zfp62	chr11	protein_coding	zinc finger protein 62
chr11	49094365	49105891	+	49094365;49103603	49103522;49105891	ES	0.25	50	50	ENSMUST00000137061.9	ENSMUSG00000046311.14	Zfp62	chr11	protein_coding	zinc finger protein 62
chr11	49105481	49105891	+	49103603	49105891	A5SS	0.25	50	50	ENSMUST00000137061.9	ENSMUSG00000046311.14	Zfp62	chr11	protein_coding	zinc finger protein 62
chr11	49103603	49105891	+	49103603	49104417	3pMXE	0.5	50	50	ENSMUST00000128932.8	ENSMUSG00000046311.14	Zfp62	chr11	protein_coding	zinc finger protein 62
chr11	49095302	49103522	+	49094995	49103522	A5SS	0.33	50	50	ENSMUST00000128932.8	ENSMUSG00000046311.14	Zfp62	chr11	protein_coding	zinc finger protein 62
chr11	49104469	49105050	+	49104469	49105353	A3SS	0.25	50	50	ENSMUST00000150284.8	ENSMUSG00000046311.14	Zfp62	chr11	protein_coding	zinc finger protein 62
chr11	49104469	49105382	+	49104469	49105353	A3SS	0.25	50	50	ENSMUST00000150284.8	ENSMUSG00000046311.14	Zfp62	chr11	protein_coding	zinc finger protein 62
chr11	49104469	49105050	+	49104469	49105382	A3SS	0.25	50	50	ENSMUST00000109197.8	ENSMUSG00000046311.14	Zfp62	chr11	protein_coding	zinc finger protein 62
chr11	49094365	49094823	+	49094365	49105891	A3SS	0.33	50	50	ENSMUST00000151228.2	ENSMUSG00000046311.14	Zfp62	chr11	protein_coding	zinc finger protein 62
chr11	49104469	49105891	+	49094365	49105891	A5SS	0.25	50	50	ENSMUST00000151228.2	ENSMUSG00000046311.14	Zfp62	chr11	protein_coding	zinc finger protein 62
chr11	49105481	49105891	+	49094365	49105891	A5SS	0.25	50	50	ENSMUST00000151228.2	ENSMUSG00000046311.14	Zfp62	chr11	protein_coding	zinc finger protein 62
chr11	49094365	49103522	+	49095302	49103522	5pMXE	0.33	50	50	ENSMUST00000136539.2	ENSMUSG00000046311.14	Zfp62	chr11	protein_coding	zinc finger protein 62
chr11	49104469	49105891	+	49105481	49105891	A5SS&ES	0.33	50	50	ENSMUST00000180016.2	ENSMUSG00000046311.14	Zfp62	chr11	protein_coding	zinc finger protein 62
chr11	49136444	49151398	+	49136444;49142501	49142377;49151398	ES	0.2	50	50	ENSMUST00000167400.8	ENSMUSG00000020346.17	Mgat1	chr11	protein_coding	mannoside acetylglucosaminyltransferase 1
chr11	49142501	49148614	+	49142501	49151398	A3SS	0.5	50	50	ENSMUST00000167400.8	ENSMUSG00000020346.17	Mgat1	chr11	protein_coding	mannoside acetylglucosaminyltransferase 1
chr11	49135282	49136020	+	49135166	49136020	A5SS	0.33	50	50	ENSMUST00000167400.8	ENSMUSG00000020346.17	Mgat1	chr11	protein_coding	mannoside acetylglucosaminyltransferase 1
chr11	49135590	49136020	+	49135166	49136020	A5SS	0.33	50	50	ENSMUST00000167400.8	ENSMUSG00000020346.17	Mgat1	chr11	protein_coding	mannoside acetylglucosaminyltransferase 1
chr11	49138358	49142377	+	49136444	49142377	A5SS	0.25	50	50	ENSMUST00000167400.8	ENSMUSG00000020346.17	Mgat1	chr11	protein_coding	mannoside acetylglucosaminyltransferase 1
chr11	49138358	49151398	+	49142501	49151398	A5SS&ES	0.2	50	50	ENSMUST00000167400.8	ENSMUSG00000020346.17	Mgat1	chr11	protein_coding	mannoside acetylglucosaminyltransferase 1
chr11	49140036	49142377	+	49136444	49142377	A5SS	0.25	50	50	ENSMUST00000167400.8	ENSMUSG00000020346.17	Mgat1	chr11	protein_coding	mannoside acetylglucosaminyltransferase 1
chr11	49141482	49142377	+	49136444	49142377	A5SS	0.25	50	50	ENSMUST00000167400.8	ENSMUSG00000020346.17	Mgat1	chr11	protein_coding	mannoside acetylglucosaminyltransferase 1
chr11	49141482	49151398	+	49142501	49151398	A5SS&ES	0.2	50	50	ENSMUST00000167400.8	ENSMUSG00000020346.17	Mgat1	chr11	protein_coding	mannoside acetylglucosaminyltransferase 1
chr11	49145042	49151398	+	49142501	49151398	A5SS	0.2	50	50	ENSMUST00000167400.8	ENSMUSG00000020346.17	Mgat1	chr11	protein_coding	mannoside acetylglucosaminyltransferase 1
chr11	49138358	49151398	+	49136444	49151398	A5SS	0.2	50	50	ENSMUST00000081794.7	ENSMUSG00000020346.17	Mgat1	chr11	protein_coding	mannoside acetylglucosaminyltransferase 1
chr11	49141482	49151398	+	49136444	49151398	A5SS	0.2	50	50	ENSMUST00000081794.7	ENSMUSG00000020346.17	Mgat1	chr11	protein_coding	mannoside acetylglucosaminyltransferase 1
chr11	49145042	49151398	+	49136444	49151398	A5SS	0.2	50	50	ENSMUST00000081794.7	ENSMUSG00000020346.17	Mgat1	chr11	protein_coding	mannoside acetylglucosaminyltransferase 1
chr11	49135590	49136020	+	49135282	49136020	A5SS	0.33	50	50	ENSMUST00000135489.2	ENSMUSG00000020346.17	Mgat1	chr11	protein_coding	mannoside acetylglucosaminyltransferase 1
chr11	49138358;49142501	49142377;49151398	+	49138358	49151398	cassetteExon	0.5	100	100	ENSMUST00000109194.2	ENSMUSG00000020346.17	Mgat1	chr11	protein_coding	mannoside acetylglucosaminyltransferase 1
chr11	49141482	49151398	+	49138358	49151398	A5SS	0.2	50	50	ENSMUST00000109194.2	ENSMUSG00000020346.17	Mgat1	chr11	protein_coding	mannoside acetylglucosaminyltransferase 1
chr11	49145042	49151398	+	49138358	49151398	A5SS	0.2	50	50	ENSMUST00000109194.2	ENSMUSG00000020346.17	Mgat1	chr11	protein_coding	mannoside acetylglucosaminyltransferase 1
chr11	49140036	49142377	+	49138358	49142377	A5SS	0.25	50	50	ENSMUST00000155806.8	ENSMUSG00000020346.17	Mgat1	chr11	protein_coding	mannoside acetylglucosaminyltransferase 1
chr11	49141482	49142377	+	49138358	49142377	A5SS	0.25	50	50	ENSMUST00000155806.8	ENSMUSG00000020346.17	Mgat1	chr11	protein_coding	mannoside acetylglucosaminyltransferase 1
chr11	49141482	49142377	+	49140036	49142377	A5SS	0.25	50	50	ENSMUST00000148962.2	ENSMUSG00000020346.17	Mgat1	chr11	protein_coding	mannoside acetylglucosaminyltransferase 1
chr11	49141482	49151398	+	49141482;49142501	49142377;49151398	ES	0.33	50	50	ENSMUST00000101293.11	ENSMUSG00000020346.17	Mgat1	chr11	protein_coding	mannoside acetylglucosaminyltransferase 1
chr11	49141482;49145042	49144938;49151398	+	49141482;49142501	49142377;49151398	MXE	0.5	100	100	ENSMUST00000101293.11	ENSMUSG00000020346.17	Mgat1	chr11	protein_coding	mannoside acetylglucosaminyltransferase 1
chr11	49141482	49144938	+	49141482	49142377	A3SS&ES	0.5	50	50	ENSMUST00000149406.2	ENSMUSG00000020346.17	Mgat1	chr11	protein_coding	mannoside acetylglucosaminyltransferase 1
chr11	49147657	49148614	+	49142501	49148614	A5SS	0.5	50	50	ENSMUST00000149406.2	ENSMUSG00000020346.17	Mgat1	chr11	protein_coding	mannoside acetylglucosaminyltransferase 1
chr11	49141482	49151398	+	49141482;49145042	49144938;49151398	ES	0.33	50	50	ENSMUST00000129541.2	ENSMUSG00000020346.17	Mgat1	chr11	protein_coding	mannoside acetylglucosaminyltransferase 1
chr11	49170247	49170934	+	49170247	49171107	A3SS	0.5	50	50	ENSMUST00000217626.2	ENSMUSG00000059864.3	Olfr1393	chr11	protein_coding	olfactory receptor 1393
chr11	49176460;49182915	49182749;49183168	+	49176460	49183168	cassetteExon	0.5	100	100	ENSMUST00000217275.2	ENSMUSG00000101750.4	Olfr1392	chr11	protein_coding	olfactory receptor 1392
chr11	49183322	49183720	+	49183322	49184128	A3SS	0.33	50	50	ENSMUST00000217275.2	ENSMUSG00000101750.4	Olfr1392	chr11	protein_coding	olfactory receptor 1392
chr11	49183322	49184377	+	49183322	49184128	A3SS	0.33	50	50	ENSMUST00000217275.2	ENSMUSG00000101750.4	Olfr1392	chr11	protein_coding	olfactory receptor 1392
chr11	49176475	49183168	+	49176460	49183168	A5SS	0.33	50	50	ENSMUST00000217275.2	ENSMUSG00000101750.4	Olfr1392	chr11	protein_coding	olfactory receptor 1392
chr11	49183322	49184377	+	49183322	49183720	A3SS	0.33	50	50	ENSMUST00000214598.2	ENSMUSG00000101750.4	Olfr1392	chr11	protein_coding	olfactory receptor 1392
chr11	49176475	49183168	+	49182915	49183168	A5SS&ES	0.33	50	50	ENSMUST00000215861.2	ENSMUSG00000101750.4	Olfr1392	chr11	protein_coding	olfactory receptor 1392
chr11	49318944	49319924	+	49318944;49319629	49319540;49319924	ES	0.5	50	50	ENSMUST00000216641.2	ENSMUSG00000107573.3	Olfr1389	chr11	protein_coding	olfactory receptor 1389
chr11	49356128;49357903	49357820;49360324	+	49356128	49360324	cassetteExon	0.5	100	100	ENSMUST00000213674.2	ENSMUSG00000108167.3	Olfr1386	chr11	protein_coding	olfactory receptor 1386
chr11	49380189;49381965	49381882;49384271	+	49380189	49384271	cassetteExon	0.5	100	100	ENSMUST00000216450.2	ENSMUSG00000059729.3	Olfr1385	chr11	protein_coding	olfactory receptor 1385
chr11	49423407;49423618	49423530;49423908	+	49423407	49423908	cassetteExon	0.5	100	100	ENSMUST00000213707.2	ENSMUSG00000063827.3	Olfr1382	chr11	protein_coding	olfactory receptor 1382
chr11	49423349	49423908	+	49423407	49423908	A5SS	0.33	50	50	ENSMUST00000213707.2	ENSMUSG00000063827.3	Olfr1382	chr11	protein_coding	olfactory receptor 1382
chr11	49423349;49423618	49423530;49423908	+	49423349	49423908	cassetteExon	0.5	100	100	ENSMUST00000213152.2	ENSMUSG00000063827.3	Olfr1382	chr11	protein_coding	olfactory receptor 1382
chr11	49423407	49423530	+	49423349	49423530	A5SS	0.5	50	50	ENSMUST00000217564.2	ENSMUSG00000063827.3	Olfr1382	chr11	protein_coding	olfactory receptor 1382
chr11	49423407	49423908	+	49423618	49423908	A5SS&ES	0.33	50	50	ENSMUST00000217564.2	ENSMUSG00000063827.3	Olfr1382	chr11	protein_coding	olfactory receptor 1382
chr11	49423349	49423908	+	49423618	49423908	A5SS&ES	0.33	50	50	ENSMUST00000213899.2	ENSMUSG00000063827.3	Olfr1382	chr11	protein_coding	olfactory receptor 1382
chr11	49554542;49554950	49554846;49555197	+	49554542	49555197	cassetteExon	0.5	100	100	ENSMUST00000043873.10	ENSMUSG00000064057.13	Scgb3a1	chr11	protein_coding	secretoglobin, family 3A, member 1
chr11	49575982	49576090	-	49575982	49576075	A5SS	0.5	50	50	ENSMUST00000145353.8	ENSMUSG00000020362.14	Cnot6	chr11	protein_coding	CCR4-NOT transcription complex, subunit 6
chr11	49745209;49745804	49745564;49754371	+	49745209	49754371	cassetteExon	0.5	100	100	ENSMUST00000109179.9	ENSMUSG00000020366.19	Mapk9	chr11	protein_coding	mitogen-activated protein kinase 9
chr11	49763726;49765162	49765091;49769058	+	49763726;49764734	49764663;49769058	MXE	0.5	100	100	ENSMUST00000109179.9	ENSMUSG00000020366.19	Mapk9	chr11	protein_coding	mitogen-activated protein kinase 9
chr11	49757868	49760039	+	49757868	49759999	A3SS	0.5	50	50	ENSMUST00000109179.9	ENSMUSG00000020366.19	Mapk9	chr11	protein_coding	mitogen-activated protein kinase 9
chr11	49773026	49773974	+	49773026	49773969	A3SS	0.5	50	50	ENSMUST00000109179.9	ENSMUSG00000020366.19	Mapk9	chr11	protein_coding	mitogen-activated protein kinase 9
chr11	49763726	49764663	+	49763726	49765091	A3SS	0.5	50	50	ENSMUST00000144857.8	ENSMUSG00000020366.19	Mapk9	chr11	protein_coding	mitogen-activated protein kinase 9
chr11	49848043;49848312	49848190;49849427	+	49848043	49849427	cassetteExon	0.5	100	100	ENSMUST00000093141.12	ENSMUSG00000020374.17	Rasgef1c	chr11	protein_coding	RasGEF domain family, member 1C
chr11	49793483	49847861	+	49792794	49847861	A5SS	0.5	50	50	ENSMUST00000093141.12	ENSMUSG00000020374.17	Rasgef1c	chr11	protein_coding	RasGEF domain family, member 1C
chr11	49854663	49858164	+	49852055	49858164	A5SS	0.5	50	50	ENSMUST00000093141.12	ENSMUSG00000020374.17	Rasgef1c	chr11	protein_coding	RasGEF domain family, member 1C
chr11	49986807	50009872	+	49986807	49995376	3pMXE	0.33	50	50	ENSMUST00000054684.14	ENSMUSG00000020376.18	Rnf130	chr11	protein_coding	ring finger protein 130
chr11	49986807;49990166	49990073;49995376	+	49986807	49995376	cassetteExon	0.5	100	100	ENSMUST00000054684.14	ENSMUSG00000020376.18	Rnf130	chr11	protein_coding	ring finger protein 130
chr11	49986807	49990073	+	49986807	50009872	A3SS	0.33	50	50	ENSMUST00000238748.2	ENSMUSG00000020376.18	Rnf130	chr11	protein_coding	ring finger protein 130
chr11	50022383;50023014	50022689;50026652	+	50022383	50026652	cassetteExon	0.5	100	100	ENSMUST00000093138.13	ENSMUSG00000036644.16	Tbc1d9b	chr11	protein_coding	TBC1 domain family, member 9B
chr11	50054723;50055039	50054989;50058996	+	50054723	50058996	cassetteExon	0.5	100	100	ENSMUST00000093138.13	ENSMUSG00000036644.16	Tbc1d9b	chr11	protein_coding	TBC1 domain family, member 9B
chr11	50026516	50026652	+	50022383	50026652	A5SS	0.33	50	50	ENSMUST00000093138.13	ENSMUSG00000036644.16	Tbc1d9b	chr11	protein_coding	TBC1 domain family, member 9B
chr11	50037467	50038848	+	50037188	50038848	A5SS	0.5	50	50	ENSMUST00000093138.13	ENSMUSG00000036644.16	Tbc1d9b	chr11	protein_coding	TBC1 domain family, member 9B
chr11	50026516	50026652	+	50023014	50026652	A5SS	0.33	50	50	ENSMUST00000147628.8	ENSMUSG00000036644.16	Tbc1d9b	chr11	protein_coding	TBC1 domain family, member 9B
chr11	50036082	50036930	+	50036082	50040529	A3SS	0.5	50	50	ENSMUST00000137852.2	ENSMUSG00000036644.16	Tbc1d9b	chr11	protein_coding	TBC1 domain family, member 9B
chr11	50039055	50040529	+	50036082	50040529	A5SS	0.5	50	50	ENSMUST00000137852.2	ENSMUSG00000036644.16	Tbc1d9b	chr11	protein_coding	TBC1 domain family, member 9B
chr11	50067713	50073319	+	50067713	50068503	3pMXE	0.5	50	50	ENSMUST00000143480.2	ENSMUSG00000020381.11	Mrnip	chr11	protein_coding	MRN complex interacting protein
chr11	50065778	50067654	+	50065374	50067654	A5SS	0.5	50	50	ENSMUST00000143480.2	ENSMUSG00000020381.11	Mrnip	chr11	protein_coding	MRN complex interacting protein
chr11	50073407;50078490	50078371;50085035	+	50073407	50085035	cassetteExon	0.5	100	100	ENSMUST00000020647.10	ENSMUSG00000020381.11	Mrnip	chr11	protein_coding	MRN complex interacting protein
chr11	50091774;50093256	50093226;50093641	-	50091774;50093421	50093340;50093641	MXE	0.5	100	100	ENSMUST00000015981.12	ENSMUSG00000015837.16	Sqstm1	chr11	protein_coding	sequestosome 1
chr11	50093256	50093641	-	50093421	50093641	A3SS	0.5	50	50	ENSMUST00000102774.11	ENSMUSG00000015837.16	Sqstm1	chr11	protein_coding	sequestosome 1
chr11	50091774	50093340	-	50091774	50093226	A5SS	0.5	50	50	ENSMUST00000102774.11	ENSMUSG00000015837.16	Sqstm1	chr11	protein_coding	sequestosome 1
chr11	50116566	50121507	+	50101857	50121507	A5SS	0.5	50	50	ENSMUST00000147468.8	ENSMUSG00000036620.15	Mgat4b	chr11	protein_coding	mannoside acetylglucosaminyltransferase 4, isoenzyme B
chr11	50123505;50124210	50123772;50124291	+	50123505	50124291	cassetteExon	0.5	100	100	ENSMUST00000151803.8	ENSMUSG00000036620.15	Mgat4b	chr11	protein_coding	mannoside acetylglucosaminyltransferase 4, isoenzyme B
chr11	50127428	50127844	-	50127539	50127844	A3SS	0.5	50	50	ENSMUST00000221391.2	ENSMUSG00000020377.16	Ltc4s	chr11	protein_coding	leukotriene C4 synthase
chr11	50128091	50128251	-	50128091	50128168	A5SS	0.5	50	50	ENSMUST00000221391.2	ENSMUSG00000020377.16	Ltc4s	chr11	protein_coding	leukotriene C4 synthase
chr11	50128250	50129205	-	50128267	50129205	A3SS	0.5	50	50	ENSMUST00000101265.9	ENSMUSG00000020377.16	Ltc4s	chr11	protein_coding	leukotriene C4 synthase
chr11	50128206	50175243	+	50128206	50154028	3pMXE	0.5	50	50	ENSMUST00000222498.2	ENSMUSG00000097887.3	Gm26542	chr11	lncRNA	predicted gene, 26542
chr11	50149655;50151900	50151804;50154077	-	50149655	50154077	cassetteExon	0.5	100	100	ENSMUST00000135868.8	ENSMUSG00000050567.17	Maml1	chr11	protein_coding	mastermind like transcriptional coactivator 1
chr11	50202611	50216320	-	50202607	50216320	A3SS	0.5	50	50	ENSMUST00000179865.8	ENSMUSG00000020368.16	Canx	chr11	protein_coding	calnexin
chr11	50270791	50273364	+	50270791;50272424	50272286;50273364	ES	0.5	50	50	ENSMUST00000109142.8	ENSMUSG00000007850.17	Hnrnph1	chr11	protein_coding	heterogeneous nuclear ribonucleoprotein H1
chr11	50274141	50274658	+	50274141;50274566	50274507;50274658	ES	0.5	50	50	ENSMUST00000109142.8	ENSMUSG00000007850.17	Hnrnph1	chr11	protein_coding	heterogeneous nuclear ribonucleoprotein H1
chr11	50275563	50276604	+	50275563;50276017	50275968;50276604	ES	0.5	50	50	ENSMUST00000109142.8	ENSMUSG00000007850.17	Hnrnph1	chr11	protein_coding	heterogeneous nuclear ribonucleoprotein H1
chr11	50270791	50271653	+	50270791	50272286	A3SS	0.33	50	50	ENSMUST00000109142.8	ENSMUSG00000007850.17	Hnrnph1	chr11	protein_coding	heterogeneous nuclear ribonucleoprotein H1
chr11	50268629	50269118	+	50268267	50269118	A5SS	0.5	50	50	ENSMUST00000109142.8	ENSMUSG00000007850.17	Hnrnph1	chr11	protein_coding	heterogeneous nuclear ribonucleoprotein H1
chr11	50274596	50275471	+	50274747	50275471	A5SS&ES	0.33	50	50	ENSMUST00000109142.8	ENSMUSG00000007850.17	Hnrnph1	chr11	protein_coding	heterogeneous nuclear ribonucleoprotein H1
chr11	50274717	50275471	+	50274747	50275471	A5SS	0.33	50	50	ENSMUST00000109142.8	ENSMUSG00000007850.17	Hnrnph1	chr11	protein_coding	heterogeneous nuclear ribonucleoprotein H1
chr11	50270791	50271653	+	50270791	50273364	A3SS	0.33	50	50	ENSMUST00000150153.8	ENSMUSG00000007850.17	Hnrnph1	chr11	protein_coding	heterogeneous nuclear ribonucleoprotein H1
chr11	50270791	50273364	+	50270791	50272286	3pMXE	0.33	50	50	ENSMUST00000133435.2	ENSMUSG00000007850.17	Hnrnph1	chr11	protein_coding	heterogeneous nuclear ribonucleoprotein H1
chr11	50274141	50274658	+	50274141	50274507	A3SS	0.5	50	50	ENSMUST00000141668.8	ENSMUSG00000007850.17	Hnrnph1	chr11	protein_coding	heterogeneous nuclear ribonucleoprotein H1
chr11	50274141;50274717	50274658;50275471	+	50274141;50274596	50274507;50275471	MXE	0.5	100	100	ENSMUST00000156642.8	ENSMUSG00000007850.17	Hnrnph1	chr11	protein_coding	heterogeneous nuclear ribonucleoprotein H1
chr11	50274141;50274747	50274658;50275471	+	50274141;50274596	50274507;50275471	MXE	0.5	100	100	ENSMUST00000156642.8	ENSMUSG00000007850.17	Hnrnph1	chr11	protein_coding	heterogeneous nuclear ribonucleoprotein H1
chr11	50274596	50275471	+	50274717	50275471	5pMXE	0.33	50	50	ENSMUST00000140056.2	ENSMUSG00000007850.17	Hnrnph1	chr11	protein_coding	heterogeneous nuclear ribonucleoprotein H1
chr11	50275563	50276604	+	50276017	50276604	5pMXE	0.5	50	50	ENSMUST00000151537.2	ENSMUSG00000007850.17	Hnrnph1	chr11	protein_coding	heterogeneous nuclear ribonucleoprotein H1
chr11	50312630	50312743	-	50312630	50321611	A5SS	0.5	50	50	ENSMUST00000020643.4	ENSMUSG00000020375.10	Rufy1	chr11	protein_coding	RUN and FYVE domain containing 1
chr11	50667581	50667692	+	50667581	50667958	A3SS	0.5	50	50	ENSMUST00000142118.3	ENSMUSG00000036545.10	Adamts2	chr11	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 2
chr11	50672707	50673525	+	50672707	50675430	A3SS	0.5	50	50	ENSMUST00000142118.3	ENSMUSG00000036545.10	Adamts2	chr11	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 2
chr11	50708038	50708116	-	50708038	50708636	A5SS	0.5	50	50	ENSMUST00000109135.9	ENSMUSG00000044807.14	Zfp354c	chr11	protein_coding	zinc finger protein 354C
chr11	50728832	50731353	-	50728832;50729363	50729237;50731353	ES	0.5	50	50	ENSMUST00000109134.8	ENSMUSG00000044296.11	Zfp879	chr11	protein_coding	zinc finger protein 879
chr11	50731417	50732197	-	50731419	50732197	A3SS	0.5	50	50	ENSMUST00000109134.8	ENSMUSG00000044296.11	Zfp879	chr11	protein_coding	zinc finger protein 879
chr11	50774638;50777105	50777000;50777196	-	50774638	50777196	cassetteExon	0.5	100	100	ENSMUST00000050595.13	ENSMUSG00000048728.16	Zfp454	chr11	protein_coding	zinc finger protein 454
chr11	50768758	50768870	-	50765114	50768870	A3SS	0.5	50	50	ENSMUST00000050595.13	ENSMUSG00000048728.16	Zfp454	chr11	protein_coding	zinc finger protein 454
chr11	50777325	50778220	-	50777325	50778193	A5SS	0.5	50	50	ENSMUST00000050595.13	ENSMUSG00000048728.16	Zfp454	chr11	protein_coding	zinc finger protein 454
chr11	50765114;50768932	50768870;50777196	-	50765114	50777196	cassetteExon	0.5	100	100	ENSMUST00000109131.8	ENSMUSG00000048728.16	Zfp454	chr11	protein_coding	zinc finger protein 454
chr11	50774638	50777196	-	50765114	50777196	A3SS	0.25	50	50	ENSMUST00000109131.8	ENSMUSG00000048728.16	Zfp454	chr11	protein_coding	zinc finger protein 454
chr11	50777105	50777196	-	50765114	50777196	A3SS	0.25	50	50	ENSMUST00000109131.8	ENSMUSG00000048728.16	Zfp454	chr11	protein_coding	zinc finger protein 454
chr11	50774638	50777196	-	50768932	50777196	A3SS	0.25	50	50	ENSMUST00000126718.8	ENSMUSG00000048728.16	Zfp454	chr11	protein_coding	zinc finger protein 454
chr11	50777105	50777196	-	50768932	50777196	A3SS	0.25	50	50	ENSMUST00000126718.8	ENSMUSG00000048728.16	Zfp454	chr11	protein_coding	zinc finger protein 454
chr11	50768932	50774011	-	50768932	50777196	A5SS	0.5	50	50	ENSMUST00000126718.8	ENSMUSG00000048728.16	Zfp454	chr11	protein_coding	zinc finger protein 454
chr11	50792118;50796513	50796433;50796913	-	50792118	50796913	cassetteExon	0.5	100	100	ENSMUST00000109129.8	ENSMUSG00000049321.18	Zfp2	chr11	protein_coding	zinc finger protein 2
chr11	50801355	50801577	-	50801352	50801577	A3SS	0.5	50	50	ENSMUST00000109129.8	ENSMUSG00000049321.18	Zfp2	chr11	protein_coding	zinc finger protein 2
chr11	50801352	50801533	-	50801352	50801577	A5SS	0.5	50	50	ENSMUST00000109129.8	ENSMUSG00000049321.18	Zfp2	chr11	protein_coding	zinc finger protein 2
chr11	50801355	50801533	-	50801352	50801533	A3SS	0.5	50	50	ENSMUST00000116378.8	ENSMUSG00000049321.18	Zfp2	chr11	protein_coding	zinc finger protein 2
chr11	50801722	50803107	-	50801703	50803107	A3SS	0.5	50	50	ENSMUST00000116378.8	ENSMUSG00000049321.18	Zfp2	chr11	protein_coding	zinc finger protein 2
chr11	50803231	50806936	-	50803228	50806936	A3SS	0.5	50	50	ENSMUST00000116378.8	ENSMUSG00000049321.18	Zfp2	chr11	protein_coding	zinc finger protein 2
chr11	50801355	50801577	-	50801355	50801533	A5SS	0.5	50	50	ENSMUST00000124748.8	ENSMUSG00000049321.18	Zfp2	chr11	protein_coding	zinc finger protein 2
chr11	50820330	50821044	-	50820330	50821728	A5SS	0.5	50	50	ENSMUST00000109124.10	ENSMUSG00000020335.14	Zfp354b	chr11	protein_coding	zinc finger protein 354B
chr11	50833579	50834288	-	50833579	50834429	A5SS	0.5	50	50	ENSMUST00000109123.2	ENSMUSG00000072983.5	4933414I15Rik	chr11	protein_coding	RIKEN cDNA 4933414I15 gene
chr11	50843076	50844127	-	50843076	50844123	A5SS	0.5	50	50	ENSMUST00000051159.3	ENSMUSG00000044542.4	Prop1	chr11	protein_coding	paired like homeodomain factor 1
chr11	50873448	50875528	+	50872890	50875528	A5SS	0.5	50	50	ENSMUST00000216101.3	ENSMUSG00000061952.7	Olfr1377	chr11	protein_coding	olfactory receptor 1377
chr11	50905371	50917812	+	50905516	50917812	A5SS	0.5	50	50	ENSMUST00000217480.2	ENSMUSG00000059397.3	Olfr54	chr11	protein_coding	olfactory receptor 54
chr11	50950229;50950868	50950613;50951687	+	50950229;50950981	50950899;50951687	MXE	0.5	100	100	ENSMUST00000102766.10	ENSMUSG00000020364.15	Zfp354a	chr11	protein_coding	zinc finger protein 354A
chr11	50951813	50952227	+	50951813	50952230	A3SS	0.5	50	50	ENSMUST00000102766.10	ENSMUSG00000020364.15	Zfp354a	chr11	protein_coding	zinc finger protein 354A
chr11	50950229	50950899	+	50950229	50950613	A3SS&ES	0.5	50	50	ENSMUST00000156914.2	ENSMUSG00000020364.15	Zfp354a	chr11	protein_coding	zinc finger protein 354A
chr11	50950868	50951687	+	50950981	50951687	A5SS	0.5	50	50	ENSMUST00000109119.8	ENSMUSG00000020364.15	Zfp354a	chr11	protein_coding	zinc finger protein 354A
chr11	51089543	51110285	-	51089543;51105041	51104872;51110285	ES	0.5	50	50	ENSMUST00000143209.8	ENSMUSG00000086646.8	Platr20	chr11	lncRNA	pluripotency associated transcript 20
chr11	51081138;51083352	51083211;51089403	-	51081138	51089403	cassetteExon	0.5	100	100	ENSMUST00000143209.8	ENSMUSG00000086646.8	Platr20	chr11	lncRNA	pluripotency associated transcript 20
chr11	51145491	51153822	-	51145491	51153604	5pMXE	0.33	50	50	ENSMUST00000065950.10	ENSMUSG00000045942.14	BC049762	chr11	protein_coding	cDNA sequence BC049762
chr11	51145491	51145986	-	51145491	51153604	A5SS	0.33	50	50	ENSMUST00000065950.10	ENSMUSG00000045942.14	BC049762	chr11	protein_coding	cDNA sequence BC049762
chr11	51145491	51145986	-	51145491	51153822	A5SS	0.33	50	50	ENSMUST00000054226.3	ENSMUSG00000045942.14	BC049762	chr11	protein_coding	cDNA sequence BC049762
chr11	51159058	51161364	+	51159058;51159673	51159596;51161364	ES	0.5	50	50	ENSMUST00000153414.8	ENSMUSG00000020385.17	Clk4	chr11	protein_coding	CDC like kinase 4
chr11	51154096	51157998	+	51152620	51157998	A5SS	0.5	50	50	ENSMUST00000153414.8	ENSMUSG00000020385.17	Clk4	chr11	protein_coding	CDC like kinase 4
chr11	51154096	51162627	+	51161422	51162627	A5SS&ES	0.25	50	50	ENSMUST00000153414.8	ENSMUSG00000020385.17	Clk4	chr11	protein_coding	CDC like kinase 4
chr11	51158158	51162627	+	51158158;51159058	51158992;51162627	ES	0.25	50	50	ENSMUST00000130641.8	ENSMUSG00000020385.17	Clk4	chr11	protein_coding	CDC like kinase 4
chr11	51162849	51164387	+	51162849;51163995	51163905;51164387	ES	0.5	50	50	ENSMUST00000130641.8	ENSMUSG00000020385.17	Clk4	chr11	protein_coding	CDC like kinase 4
chr11	51159058;51161422	51161364;51162627	+	51159058	51162627	cassetteExon	0.5	100	100	ENSMUST00000130641.8	ENSMUSG00000020385.17	Clk4	chr11	protein_coding	CDC like kinase 4
chr11	51159058	51159596	+	51159058	51162627	A3SS	0.33	50	50	ENSMUST00000130641.8	ENSMUSG00000020385.17	Clk4	chr11	protein_coding	CDC like kinase 4
chr11	51154096	51162627	+	51159058	51162627	A5SS&ES	0.25	50	50	ENSMUST00000130641.8	ENSMUSG00000020385.17	Clk4	chr11	protein_coding	CDC like kinase 4
chr11	51154096	51162627	+	51154096;51158158	51157998;51162627	ES	0.25	50	50	ENSMUST00000093132.13	ENSMUSG00000020385.17	Clk4	chr11	protein_coding	CDC like kinase 4
chr11	51161422	51162627	+	51158158	51162627	A5SS	0.25	50	50	ENSMUST00000093132.13	ENSMUSG00000020385.17	Clk4	chr11	protein_coding	CDC like kinase 4
chr11	51164449	51166038	+	51164453	51166038	A5SS	0.5	50	50	ENSMUST00000093132.13	ENSMUSG00000020385.17	Clk4	chr11	protein_coding	CDC like kinase 4
chr11	51154096	51162627	+	51154096	51157998	3pMXE	0.5	50	50	ENSMUST00000133200.2	ENSMUSG00000020385.17	Clk4	chr11	protein_coding	CDC like kinase 4
chr11	51467987;51469487	51469410;51470402	+	51467987	51470402	cassetteExon	0.5	100	100	ENSMUST00000102765.9	ENSMUSG00000063564.14	Col23a1	chr11	protein_coding	collagen, type XXIII, alpha 1
chr11	51483112	51484431	+	51483112;51483854	51483740;51484431	ES	0.5	50	50	ENSMUST00000101250.12	ENSMUSG00000020359.14	Phykpl	chr11	protein_coding	5-phosphohydroxy-L-lysine phospholyase
chr11	51491449	51491936	+	51491449	51493622	A3SS	0.5	50	50	ENSMUST00000101250.12	ENSMUSG00000020359.14	Phykpl	chr11	protein_coding	5-phosphohydroxy-L-lysine phospholyase
chr11	51492305;51492717	51492577;51493420	-	51492305	51493420	cassetteExon	0.5	100	100	ENSMUST00000074669.10	ENSMUSG00000020358.18	Hnrnpab	chr11	protein_coding	heterogeneous nuclear ribonucleoprotein A/B
chr11	51492305	51493420	-	51492717	51493420	A3SS	0.5	50	50	ENSMUST00000101249.9	ENSMUSG00000020358.18	Hnrnpab	chr11	protein_coding	heterogeneous nuclear ribonucleoprotein A/B
chr11	51515404;51516661	51516496;51517563	-	51515404	51517563	cassetteExon	0.5	100	100	ENSMUST00000136020.8	ENSMUSG00000001054.10	Rmnd5b	chr11	protein_coding	required for meiotic nuclear division 5 homolog B
chr11	51520488	51526417	-	51520453	51526417	A3SS	0.5	50	50	ENSMUST00000136020.8	ENSMUSG00000001054.10	Rmnd5b	chr11	protein_coding	required for meiotic nuclear division 5 homolog B
chr11	51515473	51516496	-	51515404	51516496	A3SS	0.5	50	50	ENSMUST00000001081.10	ENSMUSG00000001054.10	Rmnd5b	chr11	protein_coding	required for meiotic nuclear division 5 homolog B
chr11	51537101;51538989	51538835;51541505	-	51537101	51541505	cassetteExon	0.5	100	100	ENSMUST00000001080.16	ENSMUSG00000001053.16	N4bp3	chr11	protein_coding	NEDD4 binding protein 3
chr11	51537101;51541181	51540976;51541505	-	51537101	51541505	cassetteExon	0.5	100	100	ENSMUST00000001080.16	ENSMUSG00000001053.16	N4bp3	chr11	protein_coding	NEDD4 binding protein 3
chr11	51537101;51538989	51538835;51541505	-	51537101;51541181	51540976;51541505	MXE	0.5	100	100	ENSMUST00000156835.8	ENSMUSG00000001053.16	N4bp3	chr11	protein_coding	NEDD4 binding protein 3
chr11	51544698	51544819	+	51544698	51544838	A3SS	0.5	50	50	ENSMUST00000117859.8	ENSMUSG00000052563.14	D930048N14Rik	chr11	protein_coding	RIKEN cDNA D930048N14 gene
chr11	51576919	51579517	-	51576919	51579375	5pMXE	0.5	50	50	ENSMUST00000007921.9	ENSMUSG00000007777.10	0610009B22Rik	chr11	protein_coding	RIKEN cDNA 0610009B22 gene
chr11	51620402	51622630	-	51620405	51622630	A3SS	0.5	50	50	ENSMUST00000109097.9	ENSMUSG00000036391.17	Sec24a	chr11	protein_coding	Sec24 related gene family, member A (S. cerevisiae)
chr11	51670635;51673418	51673365;51673599	+	51670635	51673599	cassetteExon	0.5	100	100	ENSMUST00000020653.6	ENSMUSG00000020386.6	Sar1b	chr11	protein_coding	secretion associated Ras related GTPase 1B
chr11	51739878;51745794	51745707;51748138	-	51739878	51748138	cassetteExon	0.5	100	100	ENSMUST00000020655.14	ENSMUSG00000020387.16	Jade2	chr11	protein_coding	jade family PHD finger 2
chr11	51708484	51709324	-	51708527	51709324	A3SS	0.5	50	50	ENSMUST00000020655.14	ENSMUSG00000020387.16	Jade2	chr11	protein_coding	jade family PHD finger 2
chr11	51739878	51747859	-	51739878	51748138	A5SS	0.33	50	50	ENSMUST00000020655.14	ENSMUSG00000020387.16	Jade2	chr11	protein_coding	jade family PHD finger 2
chr11	51739878	51747859	-	51739878	51745707	A5SS&ES	0.33	50	50	ENSMUST00000109091.2	ENSMUSG00000020387.16	Jade2	chr11	protein_coding	jade family PHD finger 2
chr11	51858784;51859178	51859053;51860971	+	51858784	51860971	cassetteExon	0.5	100	100	ENSMUST00000102763.5	ENSMUSG00000020392.9	Cdkn2aipnl	chr11	protein_coding	CDKN2A interacting protein N-terminal like
chr11	51916754	51917840	+	51916754;51917745	51917586;51917840	ES	0.5	50	50	ENSMUST00000109079.9	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51924438	51926774	+	51924438	51924609	3pMXE	0.14	50	50	ENSMUST00000109079.9	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51924438	51928258	+	51924438	51924609	3pMXE	0.14	50	50	ENSMUST00000109079.9	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51924438	51931388	+	51924438	51924609	3pMXE	0.14	50	50	ENSMUST00000109079.9	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51924438	51943245	+	51924438	51924609	3pMXE	0.14	50	50	ENSMUST00000109079.9	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51924438	51975198	+	51924438	51924609	3pMXE	0.14	50	50	ENSMUST00000109079.9	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51924438	51975201	+	51924438	51924609	3pMXE	0.14	50	50	ENSMUST00000109079.9	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51895337	51895737	+	51895337	51895740	A3SS	0.5	50	50	ENSMUST00000109079.9	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51895154	51895740	+	51895337	51895740	A5SS	0.5	50	50	ENSMUST00000109079.9	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51924438	51931388	+	51924438	51928258	3pMXE	0.14	50	50	ENSMUST00000063303.11	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51924438	51943245	+	51924438	51928258	3pMXE	0.14	50	50	ENSMUST00000063303.11	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51924438	51975198	+	51924438	51928258	3pMXE	0.14	50	50	ENSMUST00000063303.11	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51924438	51975201	+	51924438	51928258	3pMXE	0.14	50	50	ENSMUST00000063303.11	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51924438;51926847	51926774;51928258	+	51924438	51928258	cassetteExon	0.5	100	100	ENSMUST00000063303.11	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51926847	51975198	+	51926847	51928258	3pMXE	0.5	50	50	ENSMUST00000109080.9	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51895337	51895737	+	51895244	51895737	A5SS	0.5	50	50	ENSMUST00000109080.9	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51924438	51943245	+	51924438	51931388	3pMXE	0.14	50	50	ENSMUST00000109081.9	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51924438	51975198	+	51924438	51931388	3pMXE	0.14	50	50	ENSMUST00000109081.9	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51924438	51975201	+	51924438	51931388	3pMXE	0.14	50	50	ENSMUST00000109081.9	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51924438	51926774	+	51924438	51931388	A3SS	0.14	50	50	ENSMUST00000109081.9	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51924438	51975198	+	51924438;51931447	51931388;51975198	ES	0.25	50	50	ENSMUST00000121591.8	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51924438;51926847	51926774;51975198	+	51924438;51931447	51931388;51975198	MXE	0.5	100	100	ENSMUST00000121591.8	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51924438;51943445	51943245;51975198	+	51924438;51931447	51931388;51975198	MXE	0.5	100	100	ENSMUST00000121591.8	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51943445	51975198	+	51943445	51948211	3pMXE	0.5	50	50	ENSMUST00000143228.8	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51924438	51926774	+	51924438	51943245	A3SS	0.2	50	50	ENSMUST00000143228.8	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51924438	51975198	+	51924438;51943445	51943245;51975198	ES	0.25	50	50	ENSMUST00000128853.8	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51924438;51926847	51926774;51975198	+	51924438;51943445	51943245;51975198	MXE	0.5	100	100	ENSMUST00000128853.8	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51924438	51975201	+	51924438	51943245	A3SS&ES	0.14	50	50	ENSMUST00000128853.8	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51924438	51926774	+	51924438	51975201	A3SS	0.14	50	50	ENSMUST00000154701.2	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51924438	51975198	+	51924438	51975201	A3SS	0.14	50	50	ENSMUST00000154701.2	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51924438	51975198	+	51924438;51926847	51926774;51975198	ES	0.25	50	50	ENSMUST00000136021.2	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	51924438	51928258	+	51924438	51926774	A3SS&ES	0.14	50	50	ENSMUST00000136021.2	ENSMUSG00000020389.20	Cdkl3	chr11	protein_coding	cyclin-dependent kinase-like 3
chr11	52127760	52133414	+	52127760;52128299	52128211;52133414	ES	0.33	50	50	ENSMUST00000147684.8	ENSMUSG00000036309.15	Skp1	chr11	protein_coding	S-phase kinase-associated protein 1
chr11	52133487	52135808	+	52133487;52134585	52134442;52135808	ES	0.5	50	50	ENSMUST00000147684.8	ENSMUSG00000036309.15	Skp1	chr11	protein_coding	S-phase kinase-associated protein 1
chr11	52127760	52129078	+	52127760	52128211	A3SS&ES	0.33	50	50	ENSMUST00000147684.8	ENSMUSG00000036309.15	Skp1	chr11	protein_coding	S-phase kinase-associated protein 1
chr11	52123439	52127664	+	52122945	52127664	A5SS	0.5	50	50	ENSMUST00000147684.8	ENSMUSG00000036309.15	Skp1	chr11	protein_coding	S-phase kinase-associated protein 1
chr11	52133301	52133414	+	52128299	52133414	A5SS	0.33	50	50	ENSMUST00000147684.8	ENSMUSG00000036309.15	Skp1	chr11	protein_coding	S-phase kinase-associated protein 1
chr11	52127760	52129078	+	52127760	52133414	A3SS	0.33	50	50	ENSMUST00000037324.12	ENSMUSG00000036309.15	Skp1	chr11	protein_coding	S-phase kinase-associated protein 1
chr11	52133301	52133414	+	52127760	52133414	A5SS	0.33	50	50	ENSMUST00000037324.12	ENSMUSG00000036309.15	Skp1	chr11	protein_coding	S-phase kinase-associated protein 1
chr11	52127760;52128299	52128211;52133414	+	52127760;52133301	52129078;52133414	MXE	0.5	100	100	ENSMUST00000116595.3	ENSMUSG00000036309.15	Skp1	chr11	protein_coding	S-phase kinase-associated protein 1
chr11	52173073	52173539	-	52173073	52173381	5pMXE	0.5	50	50	ENSMUST00000086844.10	ENSMUSG00000000782.17	Tcf7	chr11	protein_coding	transcription factor 7, T cell specific
chr11	52145998	52147085	-	52144789	52147085	A3SS	0.5	50	50	ENSMUST00000086844.10	ENSMUSG00000000782.17	Tcf7	chr11	protein_coding	transcription factor 7, T cell specific
chr11	52152451	52165644	-	52152451	52172949	A5SS	0.5	50	50	ENSMUST00000086844.10	ENSMUSG00000000782.17	Tcf7	chr11	protein_coding	transcription factor 7, T cell specific
chr11	52276560;52277298	52277194;52278243	+	52276560	52278243	cassetteExon	0.5	100	100	ENSMUST00000102758.8	ENSMUSG00000020402.12	Vdac1	chr11	protein_coding	voltage-dependent anion channel 1
chr11	52287611	52293873	+	52287430	52293873	A5SS	0.5	50	50	ENSMUST00000153855.2	ENSMUSG00000036275.14	9530068E07Rik	chr11	protein_coding	RIKEN cDNA 9530068E07 gene
chr11	53221558;53222598	53222475;53223129	+	53221558	53223129	cassetteExon	0.5	100	100	ENSMUST00000018383.10	ENSMUSG00000018239.10	Zcchc10	chr11	protein_coding	zinc finger, CCHC domain containing 10
chr11	53266460	53280582	+	53266460;53271499	53271413;53280582	ES	0.5	50	50	ENSMUST00000060945.12	ENSMUSG00000049470.14	Aff4	chr11	protein_coding	AF4/FMR2 family, member 4
chr11	53288696	53290416	+	53288696;53289226	53289064;53290416	ES	0.5	50	50	ENSMUST00000060945.12	ENSMUSG00000049470.14	Aff4	chr11	protein_coding	AF4/FMR2 family, member 4
chr11	53258993	53259487	+	53241956	53259487	A5SS	0.5	50	50	ENSMUST00000060945.12	ENSMUSG00000049470.14	Aff4	chr11	protein_coding	AF4/FMR2 family, member 4
chr11	53288696	53290416	+	53288696	53289064	3pMXE	0.5	50	50	ENSMUST00000152616.3	ENSMUSG00000049470.14	Aff4	chr11	protein_coding	AF4/FMR2 family, member 4
chr11	53319977	53320956	-	53319977	53321363	A5SS	0.33	50	50	ENSMUST00000061326.5	ENSMUSG00000044894.15	Uqcrq	chr11	protein_coding	ubiquinol-cytochrome c reductase, complex III subunit VII
chr11	53319977	53321482	-	53319977	53321363	A5SS	0.33	50	50	ENSMUST00000061326.5	ENSMUSG00000044894.15	Uqcrq	chr11	protein_coding	ubiquinol-cytochrome c reductase, complex III subunit VII
chr11	53319977	53321482	-	53319977	53320956	5pMXE	0.33	50	50	ENSMUST00000109019.8	ENSMUSG00000044894.15	Uqcrq	chr11	protein_coding	ubiquinol-cytochrome c reductase, complex III subunit VII
chr11	53323876;53324629	53324434;53327443	+	53323876	53327443	cassetteExon	0.5	100	100	ENSMUST00000156037.2	ENSMUSG00000018238.7	Gdf9	chr11	protein_coding	growth differentiation factor 9
chr11	53323876	53327443	+	53323876	53324434	3pMXE	0.5	50	50	ENSMUST00000145369.2	ENSMUSG00000018238.7	Gdf9	chr11	protein_coding	growth differentiation factor 9
chr11	53323876	53327443	+	53324629	53327443	5pMXE	0.5	50	50	ENSMUST00000018382.7	ENSMUSG00000018238.7	Gdf9	chr11	protein_coding	growth differentiation factor 9
chr11	53355157	53356323	+	53355157;53356135	53355947;53356323	ES	0.5	50	50	ENSMUST00000109013.9	ENSMUSG00000018387.13	Shroom1	chr11	protein_coding	shroom family member 1
chr11	53410866	53422823	+	53410278	53422823	A5SS	0.5	50	50	ENSMUST00000142800.2	ENSMUSG00000018398.19	Septin8	chr11	protein_coding	septin 8
chr11	53426936	53427981	+	53426936;53427575	53427479;53427981	ES	0.5	50	50	ENSMUST00000108987.8	ENSMUSG00000018398.19	Septin8	chr11	protein_coding	septin 8
chr11	53428742	53439118	+	53428742	53432037	3pMXE	0.25	50	50	ENSMUST00000108987.8	ENSMUSG00000018398.19	Septin8	chr11	protein_coding	septin 8
chr11	53425455	53425782	+	53425455	53425776	A3SS	0.5	50	50	ENSMUST00000108987.8	ENSMUSG00000018398.19	Septin8	chr11	protein_coding	septin 8
chr11	53428742	53431857	+	53428742	53432037	A3SS	0.25	50	50	ENSMUST00000108987.8	ENSMUSG00000018398.19	Septin8	chr11	protein_coding	septin 8
chr11	53428742	53432302	+	53428742	53432037	A3SS	0.25	50	50	ENSMUST00000108987.8	ENSMUSG00000018398.19	Septin8	chr11	protein_coding	septin 8
chr11	53428742	53431857	+	53428742	53439118	A3SS	0.25	50	50	ENSMUST00000121334.8	ENSMUSG00000018398.19	Septin8	chr11	protein_coding	septin 8
chr11	53428742	53432302	+	53428742	53439118	A3SS	0.25	50	50	ENSMUST00000121334.8	ENSMUSG00000018398.19	Septin8	chr11	protein_coding	septin 8
chr11	53428742	53432302	+	53428742	53431857	A3SS	0.25	50	50	ENSMUST00000117061.8	ENSMUSG00000018398.19	Septin8	chr11	protein_coding	septin 8
chr11	53456541	53457664	-	53456541	53457801	A5SS	0.5	50	50	ENSMUST00000155165.2	ENSMUSG00000086851.2	A430108G06Rik	chr11	lncRNA	RIKEN cDNA A430108G06 gene
chr11	53485214	53488786	+	53485214;53485778	53485653;53488786	ES	0.5	50	50	ENSMUST00000057330.15	ENSMUSG00000018395.20	Kif3a	chr11	protein_coding	kinesin family member 3A
chr11	53477757;53481552	53481544;53484201	+	53477757	53484201	cassetteExon	0.5	100	100	ENSMUST00000057330.15	ENSMUSG00000018395.20	Kif3a	chr11	protein_coding	kinesin family member 3A
chr11	53470011	53470535	+	53470011	53470555	A3SS	0.5	50	50	ENSMUST00000057330.15	ENSMUSG00000018395.20	Kif3a	chr11	protein_coding	kinesin family member 3A
chr11	53477757	53479516	+	53477757	53484201	A3SS	0.33	50	50	ENSMUST00000057330.15	ENSMUSG00000018395.20	Kif3a	chr11	protein_coding	kinesin family member 3A
chr11	53458701	53461363	+	53458358	53461363	A5SS	0.33	50	50	ENSMUST00000057330.15	ENSMUSG00000018395.20	Kif3a	chr11	protein_coding	kinesin family member 3A
chr11	53458875	53461363	+	53458358	53461363	A5SS	0.33	50	50	ENSMUST00000057330.15	ENSMUSG00000018395.20	Kif3a	chr11	protein_coding	kinesin family member 3A
chr11	53477757;53479587	53479516;53481544	+	53477757	53481544	cassetteExon	0.5	100	100	ENSMUST00000120613.9	ENSMUSG00000018395.20	Kif3a	chr11	protein_coding	kinesin family member 3A
chr11	53481552	53484222	+	53481552	53484201	A3SS	0.5	50	50	ENSMUST00000120613.9	ENSMUSG00000018395.20	Kif3a	chr11	protein_coding	kinesin family member 3A
chr11	53477757	53484201	+	53477757	53481544	A3SS&ES	0.33	50	50	ENSMUST00000173744.8	ENSMUSG00000018395.20	Kif3a	chr11	protein_coding	kinesin family member 3A
chr11	53458875	53461363	+	53458701	53461363	A5SS	0.33	50	50	ENSMUST00000140359.3	ENSMUSG00000018395.20	Kif3a	chr11	protein_coding	kinesin family member 3A
chr11	53504883	53508997	-	53504883	53507908	5pMXE	0.5	50	50	ENSMUST00000127858.2	ENSMUSG00000000869.13	Il4	chr11	protein_coding	interleukin 4
chr11	53503480	53504731	-	53500471	53504731	A3SS	0.5	50	50	ENSMUST00000127858.2	ENSMUSG00000000869.13	Il4	chr11	protein_coding	interleukin 4
chr11	53569885	53570860	-	53569885;53570343	53570217;53570860	ES	0.5	50	50	ENSMUST00000020649.14	ENSMUSG00000020380.17	Rad50	chr11	protein_coding	RAD50 double strand break repair protein
chr11	53575128	53578922	-	53575128;53577134	53576977;53578922	ES	0.5	50	50	ENSMUST00000020649.14	ENSMUSG00000020380.17	Rad50	chr11	protein_coding	RAD50 double strand break repair protein
chr11	53577134	53582940	-	53577134;53579104	53578922;53582940	ES	0.5	50	50	ENSMUST00000020649.14	ENSMUSG00000020380.17	Rad50	chr11	protein_coding	RAD50 double strand break repair protein
chr11	53575128;53577134	53576977;53582940	-	53575128;53579104	53578922;53582940	MXE	0.5	100	100	ENSMUST00000128483.8	ENSMUSG00000020380.17	Rad50	chr11	protein_coding	RAD50 double strand break repair protein
chr11	53662201	53664482	+	53662201;53663764	53663665;53664482	ES	0.33	50	50	ENSMUST00000108920.10	ENSMUSG00000018899.18	Irf1	chr11	protein_coding	interferon regulatory factor 1
chr11	53665020	53665880	+	53665020;53665294	53665172;53665880	ES	0.5	50	50	ENSMUST00000108920.10	ENSMUSG00000018899.18	Irf1	chr11	protein_coding	interferon regulatory factor 1
chr11	53666879	53668198	+	53666879	53667139	3pMXE	0.5	50	50	ENSMUST00000108920.10	ENSMUSG00000018899.18	Irf1	chr11	protein_coding	interferon regulatory factor 1
chr11	53661448	53662110	+	53661104	53662110	A5SS	0.2	50	50	ENSMUST00000108920.10	ENSMUSG00000018899.18	Irf1	chr11	protein_coding	interferon regulatory factor 1
chr11	53661517	53662110	+	53661104	53662110	A5SS	0.2	50	50	ENSMUST00000108920.10	ENSMUSG00000018899.18	Irf1	chr11	protein_coding	interferon regulatory factor 1
chr11	53661583	53662110	+	53661104	53662110	A5SS	0.2	50	50	ENSMUST00000108920.10	ENSMUSG00000018899.18	Irf1	chr11	protein_coding	interferon regulatory factor 1
chr11	53661635	53662110	+	53661104	53662110	A5SS	0.2	50	50	ENSMUST00000108920.10	ENSMUSG00000018899.18	Irf1	chr11	protein_coding	interferon regulatory factor 1
chr11	53661104;53662201	53662110;53664482	+	53661104	53664482	cassetteExon	0.5	100	100	ENSMUST00000128336.9	ENSMUSG00000018899.18	Irf1	chr11	protein_coding	interferon regulatory factor 1
chr11	53663764	53664482	+	53661104	53664482	A5SS	0.33	50	50	ENSMUST00000128336.9	ENSMUSG00000018899.18	Irf1	chr11	protein_coding	interferon regulatory factor 1
chr11	53662201	53664482	+	53662201	53663665	3pMXE	0.5	50	50	ENSMUST00000138913.8	ENSMUSG00000018899.18	Irf1	chr11	protein_coding	interferon regulatory factor 1
chr11	53661448	53662110	+	53661635	53662110	A5SS	0.2	50	50	ENSMUST00000138913.8	ENSMUSG00000018899.18	Irf1	chr11	protein_coding	interferon regulatory factor 1
chr11	53661517	53662110	+	53661635	53662110	A5SS	0.2	50	50	ENSMUST00000138913.8	ENSMUSG00000018899.18	Irf1	chr11	protein_coding	interferon regulatory factor 1
chr11	53661583	53662110	+	53661635	53662110	A5SS	0.2	50	50	ENSMUST00000138913.8	ENSMUSG00000018899.18	Irf1	chr11	protein_coding	interferon regulatory factor 1
chr11	53661448	53662110	+	53661583	53662110	A5SS	0.2	50	50	ENSMUST00000123376.8	ENSMUSG00000018899.18	Irf1	chr11	protein_coding	interferon regulatory factor 1
chr11	53661517	53662110	+	53661583	53662110	A5SS	0.2	50	50	ENSMUST00000123376.8	ENSMUSG00000018899.18	Irf1	chr11	protein_coding	interferon regulatory factor 1
chr11	53661448	53662110	+	53661517	53662110	A5SS	0.2	50	50	ENSMUST00000019043.13	ENSMUSG00000018899.18	Irf1	chr11	protein_coding	interferon regulatory factor 1
chr11	53677175	53695808	-	53677175	53686638	5pMXE	0.33	50	50	ENSMUST00000153206.8	ENSMUSG00000081769.10	Gm12216	chr11	protein_coding	predicted gene 12216
chr11	53677175	53704402	-	53677175	53686638	5pMXE	0.33	50	50	ENSMUST00000153206.8	ENSMUSG00000081769.10	Gm12216	chr11	protein_coding	predicted gene 12216
chr11	53677175;53695934	53695808;53704402	-	53677175	53704402	cassetteExon	0.5	100	100	ENSMUST00000135815.8	ENSMUSG00000081769.10	Gm12216	chr11	protein_coding	predicted gene 12216
chr11	53700619	53704402	-	53677175	53704402	A3SS	0.25	50	50	ENSMUST00000135815.8	ENSMUSG00000081769.10	Gm12216	chr11	protein_coding	predicted gene 12216
chr11	53704150	53704402	-	53677175	53704402	A3SS	0.25	50	50	ENSMUST00000135815.8	ENSMUSG00000081769.10	Gm12216	chr11	protein_coding	predicted gene 12216
chr11	53694620	53695808	-	53677175	53695808	A3SS	0.5	50	50	ENSMUST00000220191.2	ENSMUSG00000081769.10	Gm12216	chr11	protein_coding	predicted gene 12216
chr11	53700619	53704402	-	53695934	53704402	A3SS	0.25	50	50	ENSMUST00000220191.2	ENSMUSG00000081769.10	Gm12216	chr11	protein_coding	predicted gene 12216
chr11	53704150	53704402	-	53695934	53704402	A3SS	0.25	50	50	ENSMUST00000220191.2	ENSMUSG00000081769.10	Gm12216	chr11	protein_coding	predicted gene 12216
chr11	53704150	53704402	-	53700619	53704402	A3SS	0.25	50	50	ENSMUST00000120776.8	ENSMUSG00000081769.10	Gm12216	chr11	protein_coding	predicted gene 12216
chr11	53758531	53762394	-	53758531;53760262	53760048;53762394	ES	0.5	50	50	ENSMUST00000019044.8	ENSMUSG00000018900.8	Slc22a5	chr11	protein_coding	solute carrier family 22 (organic cation transporter), member 5
chr11	53774590	53781973	-	53765932	53781973	A3SS	0.5	50	50	ENSMUST00000136307.2	ENSMUSG00000018900.8	Slc22a5	chr11	protein_coding	solute carrier family 22 (organic cation transporter), member 5
chr11	53765932	53766835	-	53765932	53781973	A5SS	0.5	50	50	ENSMUST00000136307.2	ENSMUSG00000018900.8	Slc22a5	chr11	protein_coding	solute carrier family 22 (organic cation transporter), member 5
chr11	53842181	53843827	-	53842181;53842668	53842533;53843827	ES	0.5	50	50	ENSMUST00000076493.11	ENSMUSG00000063652.11	Slc22a21	chr11	protein_coding	solute carrier family 22 (organic cation transporter), member 21
chr11	53850201	53860326	-	53850201;53851263	53851109;53860326	ES	0.33	50	50	ENSMUST00000076493.11	ENSMUSG00000063652.11	Slc22a21	chr11	protein_coding	solute carrier family 22 (organic cation transporter), member 21
chr11	53851447	53860326	-	53851263	53860326	A3SS	0.33	50	50	ENSMUST00000076493.11	ENSMUSG00000063652.11	Slc22a21	chr11	protein_coding	solute carrier family 22 (organic cation transporter), member 21
chr11	53850201;53851447	53851109;53860326	-	53850201	53860326	cassetteExon	0.5	100	100	ENSMUST00000124221.8	ENSMUSG00000063652.11	Slc22a21	chr11	protein_coding	solute carrier family 22 (organic cation transporter), member 21
chr11	53905282	53918410	-	53898697	53918410	A3SS	0.5	50	50	ENSMUST00000020586.7	ENSMUSG00000020334.7	Slc22a4	chr11	protein_coding	solute carrier family 22 (organic cation transporter), member 4
chr11	53946065	53946616	-	53946065;53946300	53946183;53946616	ES	0.5	50	50	ENSMUST00000018755.10	ENSMUSG00000020388.13	Pdlim4	chr11	protein_coding	PDZ and LIM domain 4
chr11	53954612	53955098	-	53954612	53959666	A5SS	0.33	50	50	ENSMUST00000018755.10	ENSMUSG00000020388.13	Pdlim4	chr11	protein_coding	PDZ and LIM domain 4
chr11	53954612	53955529	-	53954612	53959666	A5SS	0.33	50	50	ENSMUST00000018755.10	ENSMUSG00000020388.13	Pdlim4	chr11	protein_coding	PDZ and LIM domain 4
chr11	53954612	53955098	-	53954612	53955529	A5SS	0.33	50	50	ENSMUST00000144477.2	ENSMUSG00000020388.13	Pdlim4	chr11	protein_coding	PDZ and LIM domain 4
chr11	53992473;53997227	53997171;54001035	+	53992473	54001035	cassetteExon	0.5	100	100	ENSMUST00000151218.8	ENSMUSG00000018906.15	P4ha2	chr11	protein_coding	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide
chr11	54001140;54001378	54001308;54001812	+	54001140	54001812	cassetteExon	0.5	100	100	ENSMUST00000151218.8	ENSMUSG00000018906.15	P4ha2	chr11	protein_coding	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide
chr11	53991866	53992346	+	53990994	53992346	A5SS	0.33	50	50	ENSMUST00000151218.8	ENSMUSG00000018906.15	P4ha2	chr11	protein_coding	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide
chr11	53991866	54001035	+	53992473	54001035	A5SS&ES	0.25	50	50	ENSMUST00000151218.8	ENSMUSG00000018906.15	P4ha2	chr11	protein_coding	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide
chr11	53992060	53992346	+	53990994	53992346	A5SS	0.33	50	50	ENSMUST00000151218.8	ENSMUSG00000018906.15	P4ha2	chr11	protein_coding	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide
chr11	53998191	54001035	+	53992473	54001035	A5SS	0.25	50	50	ENSMUST00000151218.8	ENSMUSG00000018906.15	P4ha2	chr11	protein_coding	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide
chr11	54001997	54002249	+	54001908	54002249	A5SS	0.5	50	50	ENSMUST00000151218.8	ENSMUSG00000018906.15	P4ha2	chr11	protein_coding	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide
chr11	54004155	54004963	+	54002400	54004963	A5SS	0.5	50	50	ENSMUST00000151218.8	ENSMUSG00000018906.15	P4ha2	chr11	protein_coding	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide
chr11	53991866	54001035	+	53991866;53992473	53992346;54001035	ES	0.25	50	50	ENSMUST00000093107.12	ENSMUSG00000018906.15	P4ha2	chr11	protein_coding	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide
chr11	54016642;54017237	54017172;54019874	+	54016642;54017123	54017064;54019874	MXE	0.5	100	100	ENSMUST00000093107.12	ENSMUSG00000018906.15	P4ha2	chr11	protein_coding	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide
chr11	53991866	53992309	+	53991866	53992346	A3SS	0.33	50	50	ENSMUST00000093107.12	ENSMUSG00000018906.15	P4ha2	chr11	protein_coding	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide
chr11	53992060	53992346	+	53991866	53992346	A5SS	0.33	50	50	ENSMUST00000093107.12	ENSMUSG00000018906.15	P4ha2	chr11	protein_coding	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide
chr11	54016642	54017172	+	54016642	54017064	A3SS	0.5	50	50	ENSMUST00000125651.8	ENSMUSG00000018906.15	P4ha2	chr11	protein_coding	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide
chr11	53991866;53992473	53992309;54001035	+	53991866	54001035	cassetteExon	0.5	100	100	ENSMUST00000174616.8	ENSMUSG00000018906.15	P4ha2	chr11	protein_coding	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide
chr11	53997227	54001035	+	53991866	54001035	A5SS	0.25	50	50	ENSMUST00000174616.8	ENSMUSG00000018906.15	P4ha2	chr11	protein_coding	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide
chr11	53998191	54001035	+	53991866	54001035	A5SS	0.25	50	50	ENSMUST00000174616.8	ENSMUSG00000018906.15	P4ha2	chr11	protein_coding	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide
chr11	53998191	54001035	+	53997227	54001035	A5SS	0.25	50	50	ENSMUST00000129499.8	ENSMUSG00000018906.15	P4ha2	chr11	protein_coding	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide
chr11	54225951;54227974	54227897;54229238	+	54225951;54227839	54227762;54229238	MXE	0.5	100	100	ENSMUST00000093106.12	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54225951	54229280	+	54225951	54227762	A3SS&ES	0.33	50	50	ENSMUST00000093106.12	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54242949	54252092	+	54242949	54243817	A3SS&ES	0.5	50	50	ENSMUST00000093106.12	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54194894	54210978	+	54194748	54210978	A5SS	0.12	50	50	ENSMUST00000093106.12	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54194935	54210978	+	54194748	54210978	A5SS	0.12	50	50	ENSMUST00000093106.12	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54195159	54210978	+	54194748	54210978	A5SS	0.12	50	50	ENSMUST00000093106.12	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54204567	54210978	+	54194748	54210978	A5SS	0.12	50	50	ENSMUST00000093106.12	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54206033	54210978	+	54194748	54210978	A5SS	0.12	50	50	ENSMUST00000093106.12	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54206588	54210978	+	54194748	54210978	A5SS	0.12	50	50	ENSMUST00000093106.12	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54210811	54210978	+	54194748	54210978	A5SS	0.12	50	50	ENSMUST00000093106.12	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54211093	54214067	+	54211198	54214067	A5SS	0.5	50	50	ENSMUST00000093106.12	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54225951	54227897	+	54225951	54229280	A3SS	0.33	50	50	ENSMUST00000000145.12	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54194935	54210978	+	54194894	54210978	A5SS	0.12	50	50	ENSMUST00000000145.12	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54195159	54210978	+	54194894	54210978	A5SS	0.12	50	50	ENSMUST00000000145.12	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54204567	54210978	+	54194894	54210978	A5SS	0.12	50	50	ENSMUST00000000145.12	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54206033	54210978	+	54194894	54210978	A5SS	0.12	50	50	ENSMUST00000000145.12	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54206588	54210978	+	54194894	54210978	A5SS	0.12	50	50	ENSMUST00000000145.12	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54210811	54210978	+	54194894	54210978	A5SS	0.12	50	50	ENSMUST00000000145.12	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54195159	54210978	+	54194935	54210978	A5SS	0.12	50	50	ENSMUST00000138515.8	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54204567	54210978	+	54194935	54210978	A5SS	0.12	50	50	ENSMUST00000138515.8	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54206033	54210978	+	54194935	54210978	A5SS	0.12	50	50	ENSMUST00000138515.8	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54206588	54210978	+	54194935	54210978	A5SS	0.12	50	50	ENSMUST00000138515.8	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54210811	54210978	+	54194935	54210978	A5SS	0.12	50	50	ENSMUST00000138515.8	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54204567	54210978	+	54195159	54210978	A5SS	0.12	50	50	ENSMUST00000108904.10	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54206033	54210978	+	54195159	54210978	A5SS	0.12	50	50	ENSMUST00000108904.10	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54206588	54210978	+	54195159	54210978	A5SS	0.12	50	50	ENSMUST00000108904.10	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54210811	54210978	+	54195159	54210978	A5SS	0.12	50	50	ENSMUST00000108904.10	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54206033	54210978	+	54204567	54210978	A5SS	0.12	50	50	ENSMUST00000149403.8	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54206588	54210978	+	54204567	54210978	A5SS	0.12	50	50	ENSMUST00000149403.8	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54210811	54210978	+	54204567	54210978	A5SS	0.12	50	50	ENSMUST00000149403.8	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54206033;54206588	54206123;54210978	+	54206033	54210978	cassetteExon	0.5	100	100	ENSMUST00000072178.11	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54206033;54206588	54206420;54210978	+	54206033	54210978	cassetteExon	0.5	100	100	ENSMUST00000072178.11	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54210811	54210978	+	54206033	54210978	A5SS	0.12	50	50	ENSMUST00000072178.11	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54206033	54206420	+	54206033;54206329	54206123;54206420	ES	0.5	50	50	ENSMUST00000101211.9	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54210811	54210978	+	54206588	54210978	A5SS	0.33	50	50	ENSMUST00000101211.9	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54225951	54227762	+	54225951	54227897	A3SS	0.33	50	50	ENSMUST00000064690.10	ENSMUSG00000020333.18	Acsl6	chr11	protein_coding	acyl-CoA synthetase long-chain family member 6
chr11	54356249	54356913	+	54329214	54356913	A5SS	0.5	50	50	ENSMUST00000046835.14	ENSMUSG00000035992.16	Fnip1	chr11	protein_coding	folliculin interacting protein 1
chr11	54582566	54586906	+	54582566;54585398	54585096;54586906	ES	0.5	50	50	ENSMUST00000102743.10	ENSMUSG00000037533.21	Rapgef6	chr11	protein_coding	Rap guanine nucleotide exchange factor (GEF) 6
chr11	54540165;54542589	54542575;54548072	+	54540165	54548072	cassetteExon	0.5	100	100	ENSMUST00000102743.10	ENSMUSG00000037533.21	Rapgef6	chr11	protein_coding	Rap guanine nucleotide exchange factor (GEF) 6
chr11	54559563;54562504	54562481;54567021	+	54559563	54567021	cassetteExon	0.5	100	100	ENSMUST00000102743.10	ENSMUSG00000037533.21	Rapgef6	chr11	protein_coding	Rap guanine nucleotide exchange factor (GEF) 6
chr11	54574852	54578370	+	54574852	54581003	A3SS	0.5	50	50	ENSMUST00000102743.10	ENSMUSG00000037533.21	Rapgef6	chr11	protein_coding	Rap guanine nucleotide exchange factor (GEF) 6
chr11	54487929	54501614	+	54459322	54501614	A5SS	0.5	50	50	ENSMUST00000102743.10	ENSMUSG00000037533.21	Rapgef6	chr11	protein_coding	Rap guanine nucleotide exchange factor (GEF) 6
chr11	54631376;54632160	54632079;54647232	-	54631376	54647232	cassetteExon	0.5	100	100	ENSMUST00000064104.13	ENSMUSG00000052298.13	Cdc42se2	chr11	protein_coding	CDC42 small effector 2
chr11	54631376;54646750	54646652;54647232	-	54631376	54647232	cassetteExon	0.5	100	100	ENSMUST00000064104.13	ENSMUSG00000052298.13	Cdc42se2	chr11	protein_coding	CDC42 small effector 2
chr11	54647385	54651007	-	54647385	54678386	A5SS	0.5	50	50	ENSMUST00000064104.13	ENSMUSG00000052298.13	Cdc42se2	chr11	protein_coding	CDC42 small effector 2
chr11	54631376;54646750	54646652;54647232	-	54631376;54632160	54632079;54647232	MXE	0.5	100	100	ENSMUST00000153209.8	ENSMUSG00000052298.13	Cdc42se2	chr11	protein_coding	CDC42 small effector 2
chr11	54740222	54741171	-	54739486	54741171	A3SS	0.5	50	50	ENSMUST00000148070.8	ENSMUSG00000020268.15	Lyrm7	chr11	protein_coding	LYR motif containing 7
chr11	54741238	54751378	-	54744125	54751378	A3SS&ES	0.5	50	50	ENSMUST00000148070.8	ENSMUSG00000020268.15	Lyrm7	chr11	protein_coding	LYR motif containing 7
chr11	54798106;54798685	54798590;54799367	+	54798106	54799367	cassetteExon	0.5	100	100	ENSMUST00000125094.9	ENSMUSG00000018339.13	Gpx3	chr11	protein_coding	glutathione peroxidase 3
chr11	54830561	54846847	-	54830561;54831708	54831537;54846847	ES	0.5	50	50	ENSMUST00000108889.10	ENSMUSG00000020400.18	Tnip1	chr11	protein_coding	TNFAIP3 interacting protein 1
chr11	54831708	54853659	-	54831708	54846847	5pMXE	0.25	50	50	ENSMUST00000108889.10	ENSMUSG00000020400.18	Tnip1	chr11	protein_coding	TNFAIP3 interacting protein 1
chr11	54802323	54806323	-	54802397	54806323	A3SS	0.5	50	50	ENSMUST00000108889.10	ENSMUSG00000020400.18	Tnip1	chr11	protein_coding	TNFAIP3 interacting protein 1
chr11	54830561	54843176	-	54830561	54831537	A5SS&ES	0.33	50	50	ENSMUST00000108889.10	ENSMUSG00000020400.18	Tnip1	chr11	protein_coding	TNFAIP3 interacting protein 1
chr11	54831708	54843176	-	54831708	54846847	A5SS	0.25	50	50	ENSMUST00000108889.10	ENSMUSG00000020400.18	Tnip1	chr11	protein_coding	TNFAIP3 interacting protein 1
chr11	54831708	54846674	-	54831708	54846847	A5SS	0.25	50	50	ENSMUST00000108889.10	ENSMUSG00000020400.18	Tnip1	chr11	protein_coding	TNFAIP3 interacting protein 1
chr11	54830561	54843176	-	54830561;54831708	54831537;54843176	ES	0.5	50	50	ENSMUST00000102730.9	ENSMUSG00000020400.18	Tnip1	chr11	protein_coding	TNFAIP3 interacting protein 1
chr11	54831708	54853659	-	54831708;54843228	54843176;54853659	ES	0.25	50	50	ENSMUST00000102730.9	ENSMUSG00000020400.18	Tnip1	chr11	protein_coding	TNFAIP3 interacting protein 1
chr11	54830561;54847004	54846847;54853659	-	54830561;54843228	54831537;54853659	MXE	0.5	100	100	ENSMUST00000102730.9	ENSMUSG00000020400.18	Tnip1	chr11	protein_coding	TNFAIP3 interacting protein 1
chr11	54831708;54847004	54846674;54853659	-	54831708;54843228	54843176;54853659	MXE	0.5	100	100	ENSMUST00000102730.9	ENSMUSG00000020400.18	Tnip1	chr11	protein_coding	TNFAIP3 interacting protein 1
chr11	54831708;54847004	54846847;54853659	-	54831708;54843228	54843176;54853659	MXE	0.5	100	100	ENSMUST00000102730.9	ENSMUSG00000020400.18	Tnip1	chr11	protein_coding	TNFAIP3 interacting protein 1
chr11	54830561	54853659	-	54830561;54831708	54831537;54853659	ES	0.25	50	50	ENSMUST00000018482.13	ENSMUSG00000020400.18	Tnip1	chr11	protein_coding	TNFAIP3 interacting protein 1
chr11	54830561;54843228	54843176;54853659	-	54830561;54831708	54831537;54853659	MXE	0.5	100	100	ENSMUST00000018482.13	ENSMUSG00000020400.18	Tnip1	chr11	protein_coding	TNFAIP3 interacting protein 1
chr11	54830561;54847004	54846847;54853659	-	54830561;54831708	54831537;54853659	MXE	0.5	100	100	ENSMUST00000018482.13	ENSMUSG00000020400.18	Tnip1	chr11	protein_coding	TNFAIP3 interacting protein 1
chr11	54831708;54847004	54846674;54853659	-	54831708	54853659	cassetteExon	0.5	100	100	ENSMUST00000018482.13	ENSMUSG00000020400.18	Tnip1	chr11	protein_coding	TNFAIP3 interacting protein 1
chr11	54831708;54847004	54846847;54853659	-	54831708	54853659	cassetteExon	0.5	100	100	ENSMUST00000018482.13	ENSMUSG00000020400.18	Tnip1	chr11	protein_coding	TNFAIP3 interacting protein 1
chr11	54830561;54843228	54843176;54853659	-	54830561	54853659	cassetteExon	0.5	100	100	ENSMUST00000108886.8	ENSMUSG00000020400.18	Tnip1	chr11	protein_coding	TNFAIP3 interacting protein 1
chr11	54830561;54847004	54846847;54853659	-	54830561	54853659	cassetteExon	0.5	100	100	ENSMUST00000108886.8	ENSMUSG00000020400.18	Tnip1	chr11	protein_coding	TNFAIP3 interacting protein 1
chr11	54830561;54843228	54843176;54853659	-	54830561;54847004	54831537;54853659	MXE	0.5	100	100	ENSMUST00000102731.8	ENSMUSG00000020400.18	Tnip1	chr11	protein_coding	TNFAIP3 interacting protein 1
chr11	54830561;54847004	54846847;54853659	-	54830561;54843228	54843176;54853659	MXE	0.5	100	100	ENSMUST00000108885.8	ENSMUSG00000020400.18	Tnip1	chr11	protein_coding	TNFAIP3 interacting protein 1
chr11	54830561	54853659	-	54830561	54846847	5pMXE	0.25	50	50	ENSMUST00000126703.8	ENSMUSG00000020400.18	Tnip1	chr11	protein_coding	TNFAIP3 interacting protein 1
chr11	54830561	54843176	-	54830561	54846847	A5SS	0.25	50	50	ENSMUST00000126703.8	ENSMUSG00000020400.18	Tnip1	chr11	protein_coding	TNFAIP3 interacting protein 1
chr11	54831708	54853659	-	54831708	54846674	5pMXE	0.25	50	50	ENSMUST00000155316.2	ENSMUSG00000020400.18	Tnip1	chr11	protein_coding	TNFAIP3 interacting protein 1
chr11	54830561	54846847	-	54830561	54831537	A5SS&ES	0.33	50	50	ENSMUST00000155316.2	ENSMUSG00000020400.18	Tnip1	chr11	protein_coding	TNFAIP3 interacting protein 1
chr11	54831708	54843176	-	54831708	54846674	A5SS	0.25	50	50	ENSMUST00000155316.2	ENSMUSG00000020400.18	Tnip1	chr11	protein_coding	TNFAIP3 interacting protein 1
chr11	54830561	54846847	-	54831708	54846847	3pMXE	0.5	50	50	ENSMUST00000151736.2	ENSMUSG00000020400.18	Tnip1	chr11	protein_coding	TNFAIP3 interacting protein 1
chr11	54830561	54853659	-	54831708	54853659	3pMXE	0.25	50	50	ENSMUST00000132776.2	ENSMUSG00000020400.18	Tnip1	chr11	protein_coding	TNFAIP3 interacting protein 1
chr11	54877041	54882217	-	54877041;54877894	54877877;54882217	ES	0.5	50	50	ENSMUST00000108883.10	ENSMUSG00000018340.14	Anxa6	chr11	protein_coding	annexin A6
chr11	55037060;55037627	55037523;55039384	-	55037060	55039384	cassetteExon	0.5	100	100	ENSMUST00000020502.9	ENSMUSG00000049491.16	Slc36a3	chr11	protein_coding	solute carrier family 36 (proton/amino acid symporter), member 3
chr11	55040779	55041996	-	55039474	55041996	A3SS	0.5	50	50	ENSMUST00000020502.9	ENSMUSG00000049491.16	Slc36a3	chr11	protein_coding	solute carrier family 36 (proton/amino acid symporter), member 3
chr11	55042266	55042376	-	55042266	55042398	A5SS	0.5	50	50	ENSMUST00000020502.9	ENSMUSG00000049491.16	Slc36a3	chr11	protein_coding	solute carrier family 36 (proton/amino acid symporter), member 3
chr11	55095314;55103729	55103691;55104756	+	55095314	55104756	cassetteExon	0.5	100	100	ENSMUST00000108872.9	ENSMUSG00000020261.16	Slc36a1	chr11	protein_coding	solute carrier family 36 (proton/amino acid symporter), member 1
chr11	55300823	55313827	-	55300823	55310614	5pMXE	0.5	50	50	ENSMUST00000108858.8	ENSMUSG00000018593.14	Sparc	chr11	protein_coding	secreted acidic cysteine rich glycoprotein
chr11	55298099	55300754	-	55298102	55300754	A3SS	0.33	50	50	ENSMUST00000108858.8	ENSMUSG00000018593.14	Sparc	chr11	protein_coding	secreted acidic cysteine rich glycoprotein
chr11	55298105	55300754	-	55298102	55300754	A3SS	0.33	50	50	ENSMUST00000108858.8	ENSMUSG00000018593.14	Sparc	chr11	protein_coding	secreted acidic cysteine rich glycoprotein
chr11	55298099	55300754	-	55298105	55300754	A3SS	0.33	50	50	ENSMUST00000018737.13	ENSMUSG00000018593.14	Sparc	chr11	protein_coding	secreted acidic cysteine rich glycoprotein
chr11	55337610	55345707	-	55337610;55341451	55341283;55345707	ES	0.5	50	50	ENSMUST00000108857.2	ENSMUSG00000018585.10	Atox1	chr11	protein_coding	antioxidant 1 copper chaperone
chr11	55376564	55377944	+	55376564	55378305	A3SS	0.5	50	50	ENSMUST00000018727.4	ENSMUSG00000018583.6	G3bp1	chr11	protein_coding	GTPase activating protein (SH3 domain) binding protein 1
chr11	55457102;55465235	55465108;55498504	-	55457102	55498504	cassetteExon	0.5	100	100	ENSMUST00000108853.8	ENSMUSG00000000263.16	Glra1	chr11	protein_coding	glycine receptor, alpha 1 subunit
chr11	55405953	55411748	-	55405929	55411748	A3SS	0.5	50	50	ENSMUST00000108853.8	ENSMUSG00000000263.16	Glra1	chr11	protein_coding	glycine receptor, alpha 1 subunit
chr11	56903996	56905980	+	56902941	56905980	A5SS	0.5	50	50	ENSMUST00000125292.2	ENSMUSG00000020524.17	Gria1	chr11	protein_coding	glutamate receptor, ionotropic, AMPA1 (alpha 1)
chr11	57180321;57200709	57200595;57208492	+	57180321;57201548	57201434;57208492	MXE	0.5	100	100	ENSMUST00000036315.16	ENSMUSG00000020524.17	Gria1	chr11	protein_coding	glutamate receptor, ionotropic, AMPA1 (alpha 1)
chr11	57074478	57076619	+	56906117	57076619	A5SS	0.5	50	50	ENSMUST00000036315.16	ENSMUSG00000020524.17	Gria1	chr11	protein_coding	glutamate receptor, ionotropic, AMPA1 (alpha 1)
chr11	57404561	57404900	-	57404561	57404921	A5SS	0.5	50	50	ENSMUST00000020831.13	ENSMUSG00000020523.15	Fam114a2	chr11	protein_coding	family with sequence similarity 114, member A2
chr11	57409574	57418685	+	57409538	57418685	A5SS	0.33	50	50	ENSMUST00000108849.8	ENSMUSG00000020522.14	Mfap3	chr11	protein_coding	microfibrillar-associated protein 3
chr11	57413927	57418685	+	57409538	57418685	A5SS	0.33	50	50	ENSMUST00000108849.8	ENSMUSG00000020522.14	Mfap3	chr11	protein_coding	microfibrillar-associated protein 3
chr11	57413927	57418685	+	57409574	57418685	A5SS	0.33	50	50	ENSMUST00000020830.14	ENSMUSG00000020522.14	Mfap3	chr11	protein_coding	microfibrillar-associated protein 3
chr11	57686620	57687138	-	57686620;57686999	57686852;57687138	ES	0.5	50	50	ENSMUST00000152790.8	ENSMUSG00000087165.8	2010001A14Rik	chr11	lncRNA	RIKEN cDNA 2010001A14 gene
chr11	57686999	57692060	-	57686999;57687223	57687138;57692060	ES	0.5	50	50	ENSMUST00000152790.8	ENSMUSG00000087165.8	2010001A14Rik	chr11	lncRNA	RIKEN cDNA 2010001A14 gene
chr11	57686620;57686999	57686852;57692060	-	57686620;57687223	57687138;57692060	MXE	0.5	100	100	ENSMUST00000132378.2	ENSMUSG00000087165.8	2010001A14Rik	chr11	lncRNA	RIKEN cDNA 2010001A14 gene
chr11	57963395	57963669	-	57963420	57963669	A3SS	0.5	50	50	ENSMUST00000218429.2	ENSMUSG00000086962.5	Gm12248	chr11	protein_coding	predicted gene 12248
chr11	57963769	57971751	-	57963817	57971751	A3SS	0.5	50	50	ENSMUST00000218429.2	ENSMUSG00000086962.5	Gm12248	chr11	protein_coding	predicted gene 12248
chr11	58006201	58008033	+	58006201	58008265	A3SS	0.5	50	50	ENSMUST00000020822.12	ENSMUSG00000020515.14	Cnot8	chr11	protein_coding	CCR4-NOT transcription complex, subunit 8
chr11	57995174	58000382	+	57995034	58000382	A5SS	0.33	50	50	ENSMUST00000020822.12	ENSMUSG00000020515.14	Cnot8	chr11	protein_coding	CCR4-NOT transcription complex, subunit 8
chr11	57995620	58000382	+	57995034	58000382	A5SS	0.33	50	50	ENSMUST00000020822.12	ENSMUSG00000020515.14	Cnot8	chr11	protein_coding	CCR4-NOT transcription complex, subunit 8
chr11	57995620	58000382	+	57995174	58000382	A5SS	0.33	50	50	ENSMUST00000108843.8	ENSMUSG00000020515.14	Cnot8	chr11	protein_coding	CCR4-NOT transcription complex, subunit 8
chr11	58013201	58015758	-	58013204	58015758	A3SS	0.5	50	50	ENSMUST00000172035.8	ENSMUSG00000037275.15	Gemin5	chr11	protein_coding	gem nuclear organelle associated protein 5
chr11	58028589	58029845	-	58028592	58029845	A3SS	0.5	50	50	ENSMUST00000172035.8	ENSMUSG00000037275.15	Gemin5	chr11	protein_coding	gem nuclear organelle associated protein 5
chr11	58062847	58063859	+	58062668	58063859	A5SS	0.5	50	50	ENSMUST00000020820.2	ENSMUSG00000020514.9	Mrpl22	chr11	protein_coding	mitochondrial ribosomal protein L22
chr11	58097002	58097145	+	58096945	58097145	A5SS	0.5	50	50	ENSMUST00000094169.11	ENSMUSG00000078853.9	Igtp	chr11	protein_coding	interferon gamma induced GTPase
chr11	58090605	58092294	+	58090605	58110290	A3SS	0.5	50	50	ENSMUST00000058704.9	ENSMUSG00000069874.8	Irgm2	chr11	protein_coding	immunity-related GTPase family M member 2
chr11	58105996	58110290	+	58090605	58110290	A5SS	0.33	50	50	ENSMUST00000058704.9	ENSMUSG00000069874.8	Irgm2	chr11	protein_coding	immunity-related GTPase family M member 2
chr11	58107827	58110290	+	58090605	58110290	A5SS	0.33	50	50	ENSMUST00000058704.9	ENSMUSG00000069874.8	Irgm2	chr11	protein_coding	immunity-related GTPase family M member 2
chr11	58105996	58110290	+	58105996;58107827	58107782;58110290	ES	0.5	50	50	ENSMUST00000209079.2	ENSMUSG00000069874.8	Irgm2	chr11	protein_coding	immunity-related GTPase family M member 2
chr11	58182374	58184063	+	58182405	58184063	A5SS	0.5	50	50	ENSMUST00000108834.3	ENSMUSG00000069873.5	4930438A08Rik	chr11	protein_coding	RIKEN cDNA 4930438A08 gene
chr11	58198082	58198338	+	58198082	58198400	A3SS	0.5	50	50	ENSMUST00000153510.9	ENSMUSG00000037243.18	Zfp692	chr11	protein_coding	zinc finger protein 692
chr11	58210416	58221038	-	58210416	58214096	5pMXE	0.25	50	50	ENSMUST00000064786.12	ENSMUSG00000049755.15	Zfp672	chr11	protein_coding	zinc finger protein 672
chr11	58210416;58213555	58213426;58214096	-	58210416	58214096	cassetteExon	0.5	100	100	ENSMUST00000064786.12	ENSMUSG00000049755.15	Zfp672	chr11	protein_coding	zinc finger protein 672
chr11	58210416	58210693	-	58210416	58214096	A5SS	0.25	50	50	ENSMUST00000064786.12	ENSMUSG00000049755.15	Zfp672	chr11	protein_coding	zinc finger protein 672
chr11	58210416;58210780	58210693;58213426	-	58210416	58213426	cassetteExon	0.5	100	100	ENSMUST00000057836.12	ENSMUSG00000049755.15	Zfp672	chr11	protein_coding	zinc finger protein 672
chr11	58213555	58213681	-	58213555	58214096	A5SS	0.5	50	50	ENSMUST00000057836.12	ENSMUSG00000049755.15	Zfp672	chr11	protein_coding	zinc finger protein 672
chr11	58210416	58213426	-	58210416	58210693	A5SS&ES	0.5	50	50	ENSMUST00000108829.8	ENSMUSG00000049755.15	Zfp672	chr11	protein_coding	zinc finger protein 672
chr11	58210780	58213426	-	58210780	58213395	A5SS	0.5	50	50	ENSMUST00000108829.8	ENSMUSG00000049755.15	Zfp672	chr11	protein_coding	zinc finger protein 672
chr11	58210416	58210693	-	58210416	58221038	A5SS	0.25	50	50	ENSMUST00000186859.2	ENSMUSG00000049755.15	Zfp672	chr11	protein_coding	zinc finger protein 672
chr11	58210416	58213426	-	58210416	58221038	A5SS	0.25	50	50	ENSMUST00000186859.2	ENSMUSG00000049755.15	Zfp672	chr11	protein_coding	zinc finger protein 672
chr11	58210416	58213426	-	58210780	58213426	3pMXE	0.5	50	50	ENSMUST00000135097.8	ENSMUSG00000049755.15	Zfp672	chr11	protein_coding	zinc finger protein 672
chr11	58221618	58222080	+	58221628	58222080	A5SS	0.33	50	50	ENSMUST00000116376.9	ENSMUSG00000013646.18	Sh3bp5l	chr11	protein_coding	SH3 binding domain protein 5 like
chr11	58221941	58222080	+	58221628	58222080	A5SS	0.33	50	50	ENSMUST00000116376.9	ENSMUSG00000013646.18	Sh3bp5l	chr11	protein_coding	SH3 binding domain protein 5 like
chr11	58221941	58222080	+	58221618	58222080	A5SS	0.33	50	50	ENSMUST00000073128.7	ENSMUSG00000013646.18	Sh3bp5l	chr11	protein_coding	SH3 binding domain protein 5 like
chr11	58269924	58273111	+	58269924;58270535	58270471;58273111	ES	0.5	50	50	ENSMUST00000013787.11	ENSMUSG00000013643.14	Lypd8	chr11	protein_coding	LY6/PLAUR domain containing 8
chr11	58381350	58382936	-	58381755	58382936	A3SS	0.5	50	50	ENSMUST00000180165.3	ENSMUSG00000050813.8	Olfr332	chr11	protein_coding	olfactory receptor 332
chr11	58444410	58445420	-	58444410;58445010	58444900;58445420	ES	0.5	50	50	ENSMUST00000216725.2	ENSMUSG00000057654.7	Olfr328	chr11	protein_coding	olfactory receptor 328
chr11	58458300	58459533	-	58458300;58459023	58458866;58459533	ES	0.5	50	50	ENSMUST00000217009.2	ENSMUSG00000059279.12	Olfr224	chr11	protein_coding	olfactory receptor 224
chr11	58459630	58461355	-	58459630	58459771	5pMXE	0.5	50	50	ENSMUST00000217009.2	ENSMUSG00000059279.12	Olfr224	chr11	protein_coding	olfactory receptor 224
chr11	58486292	58488253	+	58486206	58488253	A5SS	0.5	50	50	ENSMUST00000214990.2	ENSMUSG00000056564.8	Olfr324	chr11	protein_coding	olfactory receptor 324
chr11	58550480	58552584	+	58550480;58550879	58550711;58552584	ES	0.5	50	50	ENSMUST00000214400.2	ENSMUSG00000063549.5	Olfr322	chr11	protein_coding	olfactory receptor 322
chr11	58552710	58555202	+	58552710;58554696	58554640;58555202	ES	0.5	50	50	ENSMUST00000214400.2	ENSMUSG00000063549.5	Olfr322	chr11	protein_coding	olfactory receptor 322
chr11	58549901	58550362	+	58549768	58550362	A5SS	0.5	50	50	ENSMUST00000214400.2	ENSMUSG00000063549.5	Olfr322	chr11	protein_coding	olfactory receptor 322
chr11	58550568	58550711	+	58550480	58550711	A5SS	0.5	50	50	ENSMUST00000214400.2	ENSMUSG00000063549.5	Olfr322	chr11	protein_coding	olfactory receptor 322
chr11	58550480	58552584	+	58550879	58552584	A5SS&ES	0.5	50	50	ENSMUST00000213793.2	ENSMUSG00000063549.5	Olfr322	chr11	protein_coding	olfactory receptor 322
chr11	58590592	58592638	+	58590592	58592404	A3SS	0.5	50	50	ENSMUST00000215962.2	ENSMUSG00000064044.3	Olfr319	chr11	protein_coding	olfactory receptor 319
chr11	58625198	58629070	-	58625198	58628983	A5SS	0.5	50	50	ENSMUST00000215513.2	ENSMUSG00000060030.6	Olfr317	chr11	protein_coding	olfactory receptor 317
chr11	58687484	58692587	-	58687484;58689521	58689462;58692587	ES	0.5	50	50	ENSMUST00000094156.12	ENSMUSG00000049154.13	Fam183b	chr11	protein_coding	family with sequence similarity 183, member B
chr11	58730196	58731903	+	58730196	58733383	A3SS	0.5	50	50	ENSMUST00000214776.2	ENSMUSG00000094805.3	Olfr311	chr11	protein_coding	olfactory receptor 311
chr11	58738085	58741914	+	58738085	58739472	A3SS&ES	0.5	50	50	ENSMUST00000139337.3	ENSMUSG00000072915.4	Gm12258	chr11	protein_coding	predicted gene 12258
chr11	58767646	58768769	+	58767646	58769602	A3SS	0.5	50	50	ENSMUST00000073924.10	ENSMUSG00000020491.16	2810021J22Rik	chr11	protein_coding	RIKEN cDNA 2810021J22 gene
chr11	58861275	58861368	+	58861275	58861372	A3SS	0.5	50	50	ENSMUST00000047697.12	ENSMUSG00000036964.15	Trim17	chr11	protein_coding	tripartite motif-containing 17
chr11	58854695	58855940	+	58846218	58855940	A5SS	0.5	50	50	ENSMUST00000047697.12	ENSMUSG00000036964.15	Trim17	chr11	protein_coding	tripartite motif-containing 17
chr11	58873049;58878506	58878459;58879551	+	58873049	58879551	cassetteExon	0.5	100	100	ENSMUST00000108809.8	ENSMUSG00000020455.17	Trim11	chr11	protein_coding	tripartite motif-containing 11
chr11	58879573	58879655	+	58879573	58879662	A3SS	0.5	50	50	ENSMUST00000108809.8	ENSMUSG00000020455.17	Trim11	chr11	protein_coding	tripartite motif-containing 11
chr11	58889179	58889307	-	58889197	58889307	A3SS	0.5	50	50	ENSMUST00000138587.9	ENSMUSG00000061462.19	Obscn	chr11	protein_coding	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
chr11	58933135	58934707	-	58933135;58933940	58933665;58934707	ES	0.5	50	50	ENSMUST00000238536.2	ENSMUSG00000061462.19	Obscn	chr11	protein_coding	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
chr11	58945863	58946787	-	58945863;58946466	58946203;58946787	ES	0.5	50	50	ENSMUST00000238536.2	ENSMUSG00000061462.19	Obscn	chr11	protein_coding	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
chr11	58947050	58952250	-	58947050;58951933	58951670;58952250	ES	0.5	50	50	ENSMUST00000238536.2	ENSMUSG00000061462.19	Obscn	chr11	protein_coding	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
chr11	58952513	58953473	-	58952513;58953120	58952857;58953473	ES	0.5	50	50	ENSMUST00000238536.2	ENSMUSG00000061462.19	Obscn	chr11	protein_coding	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
chr11	58954509	58957892	-	58954509;58955276	58955013;58957892	ES	0.5	50	50	ENSMUST00000238536.2	ENSMUSG00000061462.19	Obscn	chr11	protein_coding	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
chr11	58973721	58977491	-	58973721;58976166	58975891;58977491	ES	0.5	50	50	ENSMUST00000238536.2	ENSMUSG00000061462.19	Obscn	chr11	protein_coding	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
chr11	58977766	58984122	-	58977766;58981609	58981334;58984122	ES	0.5	50	50	ENSMUST00000238536.2	ENSMUSG00000061462.19	Obscn	chr11	protein_coding	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
chr11	58990791	58997121	-	58990791;58994376	58994101;58997121	ES	0.5	50	50	ENSMUST00000238536.2	ENSMUSG00000061462.19	Obscn	chr11	protein_coding	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
chr11	59006760	59015347	-	59006760;59013721	59013446;59015347	ES	0.5	50	50	ENSMUST00000238536.2	ENSMUSG00000061462.19	Obscn	chr11	protein_coding	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
chr11	59019164	59021267	-	59019164;59020671	59020396;59021267	ES	0.5	50	50	ENSMUST00000238536.2	ENSMUSG00000061462.19	Obscn	chr11	protein_coding	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
chr11	59020671	59022373	-	59020671;59021467	59021267;59022373	ES	0.5	50	50	ENSMUST00000238536.2	ENSMUSG00000061462.19	Obscn	chr11	protein_coding	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
chr11	58969732;58969986	58969825;58970383	-	58969732	58970383	cassetteExon	0.5	100	100	ENSMUST00000238536.2	ENSMUSG00000061462.19	Obscn	chr11	protein_coding	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
chr11	58904622	58911283	-	58901362	58911283	A3SS	0.25	50	50	ENSMUST00000238536.2	ENSMUSG00000061462.19	Obscn	chr11	protein_coding	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
chr11	58906304	58911283	-	58901362	58911283	A3SS	0.25	50	50	ENSMUST00000238536.2	ENSMUSG00000061462.19	Obscn	chr11	protein_coding	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
chr11	58922822	58923452	-	58922847	58923452	A3SS	0.5	50	50	ENSMUST00000238536.2	ENSMUSG00000061462.19	Obscn	chr11	protein_coding	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
chr11	58932672	58932848	-	58932678	58932848	A3SS	0.5	50	50	ENSMUST00000238536.2	ENSMUSG00000061462.19	Obscn	chr11	protein_coding	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
chr11	58937133	58940251	-	58934979	58940251	A3SS	0.5	50	50	ENSMUST00000238536.2	ENSMUSG00000061462.19	Obscn	chr11	protein_coding	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
chr11	58934979	58935640	-	58934979	58940251	A5SS	0.5	50	50	ENSMUST00000238536.2	ENSMUSG00000061462.19	Obscn	chr11	protein_coding	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
chr11	58977766	58990516	-	58977766;58984397	58984122;58990516	ES	0.5	50	50	ENSMUST00000047441.14	ENSMUSG00000061462.19	Obscn	chr11	protein_coding	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
chr11	59019164;59020671	59020396;59022373	-	59019164;59021467	59021267;59022373	MXE	0.5	100	100	ENSMUST00000047441.14	ENSMUSG00000061462.19	Obscn	chr11	protein_coding	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
chr11	58901362	58911283	-	58899447	58911283	A3SS	0.25	50	50	ENSMUST00000047441.14	ENSMUSG00000061462.19	Obscn	chr11	protein_coding	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
chr11	58904622	58911283	-	58899447	58911283	A3SS	0.25	50	50	ENSMUST00000047441.14	ENSMUSG00000061462.19	Obscn	chr11	protein_coding	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
chr11	58906304	58911283	-	58899447	58911283	A3SS	0.25	50	50	ENSMUST00000047441.14	ENSMUSG00000061462.19	Obscn	chr11	protein_coding	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
chr11	58945251	58945600	-	58943537	58945600	A3SS	0.5	50	50	ENSMUST00000047441.14	ENSMUSG00000061462.19	Obscn	chr11	protein_coding	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
chr11	58899447	58899924	-	58899447	58911283	A5SS	0.5	50	50	ENSMUST00000047441.14	ENSMUSG00000061462.19	Obscn	chr11	protein_coding	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
chr11	58943537	58944400	-	58943537	58945600	A5SS	0.5	50	50	ENSMUST00000047441.14	ENSMUSG00000061462.19	Obscn	chr11	protein_coding	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
chr11	58904622	58911283	-	58904622;58906304	58906262;58911283	ES	0.5	50	50	ENSMUST00000132238.8	ENSMUSG00000061462.19	Obscn	chr11	protein_coding	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
chr11	58977766	58981334	-	58977766	58990516	A5SS	0.33	50	50	ENSMUST00000219084.3	ENSMUSG00000061462.19	Obscn	chr11	protein_coding	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
chr11	59052484	59054177	-	59050004	59054177	A3SS	0.5	50	50	ENSMUST00000054523.6	ENSMUSG00000049287.6	Iba57	chr11	protein_coding	IBA57 homolog, iron-sulfur cluster assembly
chr11	59052484	59054177	-	59052484	59053816	5pMXE	0.5	50	50	ENSMUST00000069631.3	ENSMUSG00000049287.6	Iba57	chr11	protein_coding	IBA57 homolog, iron-sulfur cluster assembly
chr11	59068499	59073977	-	59068499	59073572	5pMXE	0.5	50	50	ENSMUST00000108793.9	ENSMUSG00000043448.14	Gjc2	chr11	protein_coding	gap junction protein, gamma 2
chr11	59077713	59082995	-	59077713	59082577	5pMXE	0.33	50	50	ENSMUST00000170202.9	ENSMUSG00000020444.20	Guk1	chr11	protein_coding	guanylate kinase 1
chr11	59077713	59078529	-	59077713	59082577	A5SS	0.33	50	50	ENSMUST00000170202.9	ENSMUSG00000020444.20	Guk1	chr11	protein_coding	guanylate kinase 1
chr11	59077713	59082995	-	59077713	59078529	5pMXE	0.33	50	50	ENSMUST00000170895.3	ENSMUSG00000020444.20	Guk1	chr11	protein_coding	guanylate kinase 1
chr11	59093485	59094998	+	59093485	59095001	A3SS	0.5	50	50	ENSMUST00000108786.8	ENSMUSG00000036860.15	Mrpl55	chr11	protein_coding	mitochondrial ribosomal protein L55
chr11	59095081	59095382	+	59095081	59095361	A3SS	0.5	50	50	ENSMUST00000108786.8	ENSMUSG00000036860.15	Mrpl55	chr11	protein_coding	mitochondrial ribosomal protein L55
chr11	59093545	59094998	+	59093485	59094998	A5SS	0.5	50	50	ENSMUST00000108787.9	ENSMUSG00000036860.15	Mrpl55	chr11	protein_coding	mitochondrial ribosomal protein L55
chr11	59104349	59118999	-	59104349	59118702	5pMXE	0.5	50	50	ENSMUST00000163300.8	ENSMUSG00000048076.15	Arf1	chr11	protein_coding	ADP-ribosylation factor 1
chr11	59329339;59333667	59333618;59340741	-	59329339	59340741	cassetteExon	0.5	100	100	ENSMUST00000010038.10	ENSMUSG00000009894.16	Snap47	chr11	protein_coding	synaptosomal-associated protein, 47
chr11	59329339;59333738	59333618;59340741	-	59329339	59340741	cassetteExon	0.5	100	100	ENSMUST00000010038.10	ENSMUSG00000009894.16	Snap47	chr11	protein_coding	synaptosomal-associated protein, 47
chr11	59298059	59319167	-	59312475	59319167	A3SS&ES	0.5	50	50	ENSMUST00000010038.10	ENSMUSG00000009894.16	Snap47	chr11	protein_coding	synaptosomal-associated protein, 47
chr11	59329339	59340619	-	59329339	59340741	A5SS	0.33	50	50	ENSMUST00000010038.10	ENSMUSG00000009894.16	Snap47	chr11	protein_coding	synaptosomal-associated protein, 47
chr11	59333667	59340741	-	59333738	59340741	A3SS	0.33	50	50	ENSMUST00000156146.8	ENSMUSG00000009894.16	Snap47	chr11	protein_coding	synaptosomal-associated protein, 47
chr11	59329339	59340619	-	59329339	59333618	A5SS&ES	0.33	50	50	ENSMUST00000156146.8	ENSMUSG00000009894.16	Snap47	chr11	protein_coding	synaptosomal-associated protein, 47
chr11	59329342	59340619	-	59329339	59340619	A3SS	0.5	50	50	ENSMUST00000136436.2	ENSMUSG00000009894.16	Snap47	chr11	protein_coding	synaptosomal-associated protein, 47
chr11	59333667	59336107	-	59333667	59340741	A5SS	0.5	50	50	ENSMUST00000132969.8	ENSMUSG00000009894.16	Snap47	chr11	protein_coding	synaptosomal-associated protein, 47
chr11	59329342	59341706	-	59329342	59340619	5pMXE	0.5	50	50	ENSMUST00000150297.2	ENSMUSG00000009894.16	Snap47	chr11	protein_coding	synaptosomal-associated protein, 47
chr11	59344471	59344654	+	59344471	59344618	A3SS	0.33	50	50	ENSMUST00000108777.10	ENSMUSG00000036819.15	Jmjd4	chr11	protein_coding	jumonji domain containing 4
chr11	59344471	59344704	+	59344471	59344618	A3SS	0.33	50	50	ENSMUST00000108777.10	ENSMUSG00000036819.15	Jmjd4	chr11	protein_coding	jumonji domain containing 4
chr11	59344471	59344704	+	59344471	59344654	A3SS	0.33	50	50	ENSMUST00000045279.13	ENSMUSG00000036819.15	Jmjd4	chr11	protein_coding	jumonji domain containing 4
chr11	59396788	59417320	-	59396788	59396990	5pMXE	0.5	50	50	ENSMUST00000013262.15	ENSMUSG00000020472.15	Zkscan17	chr11	protein_coding	zinc finger with KRAB and SCAN domains 17
chr11	59395080;59396144	59395996;59396654	-	59395080	59396654	cassetteExon	0.5	100	100	ENSMUST00000013262.15	ENSMUSG00000020472.15	Zkscan17	chr11	protein_coding	zinc finger with KRAB and SCAN domains 17
chr11	59394589	59394974	-	59394636	59394974	A3SS	0.5	50	50	ENSMUST00000013262.15	ENSMUSG00000020472.15	Zkscan17	chr11	protein_coding	zinc finger with KRAB and SCAN domains 17
chr11	59393926	59394503	-	59393926	59394210	A5SS	0.5	50	50	ENSMUST00000013262.15	ENSMUSG00000020472.15	Zkscan17	chr11	protein_coding	zinc finger with KRAB and SCAN domains 17
chr11	59416379	59417320	-	59396788	59417320	A3SS	0.5	50	50	ENSMUST00000139093.8	ENSMUSG00000020472.15	Zkscan17	chr11	protein_coding	zinc finger with KRAB and SCAN domains 17
chr11	59400576	59401546	+	59400576	59403402	A3SS	0.5	50	50	ENSMUST00000138763.8	ENSMUSG00000072893.13	4933439C10Rik	chr11	lncRNA	RIKEN cDNA 4933439C10 gene
chr11	59398482	59398657	+	59398138	59398657	A5SS	0.5	50	50	ENSMUST00000138763.8	ENSMUSG00000072893.13	4933439C10Rik	chr11	lncRNA	RIKEN cDNA 4933439C10 gene
chr11	59553774	59586952	+	59552244	59586952	A5SS	0.5	50	50	ENSMUST00000138234.2	ENSMUSG00000005417.18	Mprip	chr11	protein_coding	myosin phosphatase Rho interacting protein
chr11	59632087	59634597	+	59632087;59632924	59632817;59634597	ES	0.5	50	50	ENSMUST00000072031.13	ENSMUSG00000005417.18	Mprip	chr11	protein_coding	myosin phosphatase Rho interacting protein
chr11	59662528;59663043	59662978;59666342	+	59662528	59666342	cassetteExon	0.5	100	100	ENSMUST00000072031.13	ENSMUSG00000005417.18	Mprip	chr11	protein_coding	myosin phosphatase Rho interacting protein
chr11	59622418	59626770	+	59622418	59626656	A3SS	0.5	50	50	ENSMUST00000072031.13	ENSMUSG00000005417.18	Mprip	chr11	protein_coding	myosin phosphatase Rho interacting protein
chr11	59645935	59648350	+	59645935	59655206	A3SS	0.5	50	50	ENSMUST00000072031.13	ENSMUSG00000005417.18	Mprip	chr11	protein_coding	myosin phosphatase Rho interacting protein
chr11	59628408	59631946	+	59628054	59631946	A5SS	0.5	50	50	ENSMUST00000072031.13	ENSMUSG00000005417.18	Mprip	chr11	protein_coding	myosin phosphatase Rho interacting protein
chr11	59652153	59655206	+	59645935	59655206	A5SS	0.5	50	50	ENSMUST00000072031.13	ENSMUSG00000005417.18	Mprip	chr11	protein_coding	myosin phosphatase Rho interacting protein
chr11	59645935	59655206	+	59645935;59652153	59648350;59655206	ES	0.5	50	50	ENSMUST00000066330.15	ENSMUSG00000005417.18	Mprip	chr11	protein_coding	myosin phosphatase Rho interacting protein
chr11	59622454	59624621	-	59622454	59623412	5pMXE	0.5	50	50	ENSMUST00000139530.8	ENSMUSG00000086330.8	1700007J10Rik	chr11	lncRNA	RIKEN cDNA 1700007J10 gene
chr11	59676051	59678044	-	59676051	59678048	A5SS	0.5	50	50	ENSMUST00000051493.8	ENSMUSG00000043648.8	Pld6	chr11	protein_coding	phospholipase D family, member 6
chr11	59698741;59700311	59700191;59700486	-	59698741	59700486	cassetteExon	0.5	100	100	ENSMUST00000102697.10	ENSMUSG00000032633.13	Flcn	chr11	protein_coding	folliculin
chr11	59686401	59686576	-	59686090	59686576	A3SS	0.5	50	50	ENSMUST00000102697.10	ENSMUSG00000032633.13	Flcn	chr11	protein_coding	folliculin
chr11	59694721	59695352	-	59694721	59695347	A5SS	0.5	50	50	ENSMUST00000102697.10	ENSMUSG00000032633.13	Flcn	chr11	protein_coding	folliculin
chr11	59698741	59700311	-	59698741	59700486	A5SS	0.2	50	50	ENSMUST00000102697.10	ENSMUSG00000032633.13	Flcn	chr11	protein_coding	folliculin
chr11	59698741	59700345	-	59698741	59700486	A5SS	0.2	50	50	ENSMUST00000102697.10	ENSMUSG00000032633.13	Flcn	chr11	protein_coding	folliculin
chr11	59698741	59700526	-	59698741	59700486	A5SS	0.2	50	50	ENSMUST00000102697.10	ENSMUSG00000032633.13	Flcn	chr11	protein_coding	folliculin
chr11	59698741	59700191	-	59698741	59700526	A5SS	0.2	50	50	ENSMUST00000148151.8	ENSMUSG00000032633.13	Flcn	chr11	protein_coding	folliculin
chr11	59698741	59700311	-	59698741	59700526	A5SS	0.2	50	50	ENSMUST00000148151.8	ENSMUSG00000032633.13	Flcn	chr11	protein_coding	folliculin
chr11	59698741	59700345	-	59698741	59700526	A5SS	0.2	50	50	ENSMUST00000148151.8	ENSMUSG00000032633.13	Flcn	chr11	protein_coding	folliculin
chr11	59698741	59700191	-	59698741	59700345	A5SS	0.2	50	50	ENSMUST00000091246.11	ENSMUSG00000032633.13	Flcn	chr11	protein_coding	folliculin
chr11	59698741	59700311	-	59698741	59700345	A5SS	0.2	50	50	ENSMUST00000091246.11	ENSMUSG00000032633.13	Flcn	chr11	protein_coding	folliculin
chr11	59698741	59700191	-	59698741	59700311	A5SS	0.2	50	50	ENSMUST00000133647.8	ENSMUSG00000032633.13	Flcn	chr11	protein_coding	folliculin
chr11	59698741	59700486	-	59700311	59700486	3pMXE	0.5	50	50	ENSMUST00000151453.2	ENSMUSG00000032633.13	Flcn	chr11	protein_coding	folliculin
chr11	59718851	59723710	-	59718851;59721065	59720973;59723710	ES	0.33	50	50	ENSMUST00000019517.10	ENSMUSG00000019373.12	Cops3	chr11	protein_coding	COP9 signalosome subunit 3
chr11	59723970;59726270	59726190;59727717	-	59723970	59727717	cassetteExon	0.5	100	100	ENSMUST00000019517.10	ENSMUSG00000019373.12	Cops3	chr11	protein_coding	COP9 signalosome subunit 3
chr11	59721133	59723710	-	59721065	59723710	A3SS	0.33	50	50	ENSMUST00000019517.10	ENSMUSG00000019373.12	Cops3	chr11	protein_coding	COP9 signalosome subunit 3
chr11	59718851;59721133	59720973;59723710	-	59718851	59723710	cassetteExon	0.5	100	100	ENSMUST00000156837.2	ENSMUSG00000019373.12	Cops3	chr11	protein_coding	COP9 signalosome subunit 3
chr11	59765493	59770162	+	59765493	59766631	3pMXE	0.5	50	50	ENSMUST00000149076.8	ENSMUSG00000032615.15	Nt5m	chr11	protein_coding	5',3'-nucleotidase, mitochondrial
chr11	59739198	59743617	+	59730582	59743617	A5SS	0.33	50	50	ENSMUST00000149076.8	ENSMUSG00000032615.15	Nt5m	chr11	protein_coding	5',3'-nucleotidase, mitochondrial
chr11	59739310	59743617	+	59730582	59743617	A5SS	0.33	50	50	ENSMUST00000149076.8	ENSMUSG00000032615.15	Nt5m	chr11	protein_coding	5',3'-nucleotidase, mitochondrial
chr11	59739310	59743617	+	59739198	59743617	A5SS	0.33	50	50	ENSMUST00000102695.4	ENSMUSG00000032615.15	Nt5m	chr11	protein_coding	5',3'-nucleotidase, mitochondrial
chr11	59837922;59838747	59838650;59838828	-	59837922	59838828	cassetteExon	0.5	100	100	ENSMUST00000129175.8	ENSMUSG00000085260.8	Med9os	chr11	lncRNA	mediator complex subunit 9, opposite strand
chr11	59837922	59838828	-	59837922	59838650	A5SS	0.5	50	50	ENSMUST00000146334.2	ENSMUSG00000085260.8	Med9os	chr11	lncRNA	mediator complex subunit 9, opposite strand
chr11	59862084	59864894	-	59862084	59862250	5pMXE	0.33	50	50	ENSMUST00000150954.8	ENSMUSG00000000301.17	Pemt	chr11	protein_coding	phosphatidylethanolamine N-methyltransferase
chr11	59862084	59874269	-	59862084	59862250	5pMXE	0.33	50	50	ENSMUST00000150954.8	ENSMUSG00000000301.17	Pemt	chr11	protein_coding	phosphatidylethanolamine N-methyltransferase
chr11	59922646	59930931	-	59922646	59927648	5pMXE	0.25	50	50	ENSMUST00000102692.10	ENSMUSG00000000301.17	Pemt	chr11	protein_coding	phosphatidylethanolamine N-methyltransferase
chr11	59922646	59937166	-	59922646	59927648	5pMXE	0.25	50	50	ENSMUST00000102692.10	ENSMUSG00000000301.17	Pemt	chr11	protein_coding	phosphatidylethanolamine N-methyltransferase
chr11	59922646	59937170	-	59922646	59927648	5pMXE	0.25	50	50	ENSMUST00000102692.10	ENSMUSG00000000301.17	Pemt	chr11	protein_coding	phosphatidylethanolamine N-methyltransferase
chr11	59865005;59921339	59921021;59922539	-	59865005;59874384	59867665;59922539	MXE	0.5	100	100	ENSMUST00000102692.10	ENSMUSG00000000301.17	Pemt	chr11	protein_coding	phosphatidylethanolamine N-methyltransferase
chr11	59874384	59911937	-	59874384	59922539	A5SS	0.5	50	50	ENSMUST00000102692.10	ENSMUSG00000000301.17	Pemt	chr11	protein_coding	phosphatidylethanolamine N-methyltransferase
chr11	59874384	59937166	-	59874384	59922539	A5SS&ES	0.33	50	50	ENSMUST00000000310.14	ENSMUSG00000000301.17	Pemt	chr11	protein_coding	phosphatidylethanolamine N-methyltransferase
chr11	59922646	59930931	-	59922646	59937170	A5SS	0.25	50	50	ENSMUST00000000310.14	ENSMUSG00000000301.17	Pemt	chr11	protein_coding	phosphatidylethanolamine N-methyltransferase
chr11	59922646	59937166	-	59922646	59937170	A5SS	0.25	50	50	ENSMUST00000000310.14	ENSMUSG00000000301.17	Pemt	chr11	protein_coding	phosphatidylethanolamine N-methyltransferase
chr11	59874384	59937166	-	59874384;59922646	59922539;59937166	ES	0.33	50	50	ENSMUST00000102693.9	ENSMUSG00000000301.17	Pemt	chr11	protein_coding	phosphatidylethanolamine N-methyltransferase
chr11	59935552	59937166	-	59922646	59937166	A3SS	0.33	50	50	ENSMUST00000102693.9	ENSMUSG00000000301.17	Pemt	chr11	protein_coding	phosphatidylethanolamine N-methyltransferase
chr11	59922646	59930931	-	59922646	59937166	A5SS	0.25	50	50	ENSMUST00000102693.9	ENSMUSG00000000301.17	Pemt	chr11	protein_coding	phosphatidylethanolamine N-methyltransferase
chr11	59862084;59874384	59874269;59922539	-	59862084;59921339	59864894;59922539	MXE	0.5	100	100	ENSMUST00000136660.2	ENSMUSG00000000301.17	Pemt	chr11	protein_coding	phosphatidylethanolamine N-methyltransferase
chr11	59865005	59867665	-	59865005	59921021	A5SS	0.5	50	50	ENSMUST00000136660.2	ENSMUSG00000000301.17	Pemt	chr11	protein_coding	phosphatidylethanolamine N-methyltransferase
chr11	59867810	59874269	-	59862084	59874269	A3SS	0.5	50	50	ENSMUST00000147422.8	ENSMUSG00000000301.17	Pemt	chr11	protein_coding	phosphatidylethanolamine N-methyltransferase
chr11	59921339	59922539	-	59874384	59922539	A3SS	0.5	50	50	ENSMUST00000147422.8	ENSMUSG00000000301.17	Pemt	chr11	protein_coding	phosphatidylethanolamine N-methyltransferase
chr11	59862084	59864894	-	59862084	59874269	A5SS	0.33	50	50	ENSMUST00000147422.8	ENSMUSG00000000301.17	Pemt	chr11	protein_coding	phosphatidylethanolamine N-methyltransferase
chr11	59935552	59937166	-	59874384	59937166	A3SS	0.33	50	50	ENSMUST00000148512.2	ENSMUSG00000000301.17	Pemt	chr11	protein_coding	phosphatidylethanolamine N-methyltransferase
chr11	59874384	59911937	-	59874384	59937166	A5SS	0.33	50	50	ENSMUST00000148512.2	ENSMUSG00000000301.17	Pemt	chr11	protein_coding	phosphatidylethanolamine N-methyltransferase
chr11	60031196	60084765	+	60031196;60081448	60075922;60084765	ES	0.5	50	50	ENSMUST00000064190.13	ENSMUSG00000062115.16	Rai1	chr11	protein_coding	retinoic acid induced 1
chr11	60031196	60031478	+	60031196	60075922	A3SS	0.33	50	50	ENSMUST00000064190.13	ENSMUSG00000062115.16	Rai1	chr11	protein_coding	retinoic acid induced 1
chr11	60066787	60075922	+	60031196	60075922	A5SS	0.5	50	50	ENSMUST00000064190.13	ENSMUSG00000062115.16	Rai1	chr11	protein_coding	retinoic acid induced 1
chr11	60031196	60031478	+	60031196	60084765	A3SS	0.33	50	50	ENSMUST00000149770.8	ENSMUSG00000062115.16	Rai1	chr11	protein_coding	retinoic acid induced 1
chr11	60031196	60075922	+	60031196	60084765	A3SS	0.33	50	50	ENSMUST00000149770.8	ENSMUSG00000062115.16	Rai1	chr11	protein_coding	retinoic acid induced 1
chr11	60081448	60084765	+	60031196	60084765	A5SS	0.5	50	50	ENSMUST00000149770.8	ENSMUSG00000062115.16	Rai1	chr11	protein_coding	retinoic acid induced 1
chr11	60096903	60096999	-	60096903	60097014	A5SS	0.5	50	50	ENSMUST00000134660.8	ENSMUSG00000020538.16	Srebf1	chr11	protein_coding	sterol regulatory element binding transcription factor 1
chr11	60098083	60113349	-	60098083	60111279	5pMXE	0.33	50	50	ENSMUST00000020846.8	ENSMUSG00000020538.16	Srebf1	chr11	protein_coding	sterol regulatory element binding transcription factor 1
chr11	60098083	60101162	-	60098083	60111279	A5SS	0.33	50	50	ENSMUST00000020846.8	ENSMUSG00000020538.16	Srebf1	chr11	protein_coding	sterol regulatory element binding transcription factor 1
chr11	60098083	60113349	-	60098083	60101162	5pMXE	0.33	50	50	ENSMUST00000144942.2	ENSMUSG00000020538.16	Srebf1	chr11	protein_coding	sterol regulatory element binding transcription factor 1
chr11	60097856	60101162	-	60098083	60101162	A3SS	0.5	50	50	ENSMUST00000144942.2	ENSMUSG00000020538.16	Srebf1	chr11	protein_coding	sterol regulatory element binding transcription factor 1
chr11	60152039	60161144	-	60152039;60153609	60153475;60161144	ES	0.5	50	50	ENSMUST00000095254.12	ENSMUSG00000000538.19	Tom1l2	chr11	protein_coding	target of myb1-like 2 (chicken)
chr11	60153609	60165750	-	60153609;60161293	60161144;60165750	ES	0.5	50	50	ENSMUST00000095254.12	ENSMUSG00000000538.19	Tom1l2	chr11	protein_coding	target of myb1-like 2 (chicken)
chr11	60121963;60123783	60123724;60132644	-	60121963	60132644	cassetteExon	0.5	100	100	ENSMUST00000095254.12	ENSMUSG00000000538.19	Tom1l2	chr11	protein_coding	target of myb1-like 2 (chicken)
chr11	60129898	60132644	-	60121963	60132644	A3SS	0.25	50	50	ENSMUST00000095254.12	ENSMUSG00000000538.19	Tom1l2	chr11	protein_coding	target of myb1-like 2 (chicken)
chr11	60132171	60132644	-	60121963	60132644	A3SS	0.25	50	50	ENSMUST00000095254.12	ENSMUSG00000000538.19	Tom1l2	chr11	protein_coding	target of myb1-like 2 (chicken)
chr11	60146909	60149682	-	60139890	60149682	A3SS	0.5	50	50	ENSMUST00000095254.12	ENSMUSG00000000538.19	Tom1l2	chr11	protein_coding	target of myb1-like 2 (chicken)
chr11	60123783	60132644	-	60123783	60129836	5pMXE	0.5	50	50	ENSMUST00000153920.2	ENSMUSG00000000538.19	Tom1l2	chr11	protein_coding	target of myb1-like 2 (chicken)
chr11	60123783;60129898	60129836;60132644	-	60123783	60132644	cassetteExon	0.5	100	100	ENSMUST00000102683.11	ENSMUSG00000000538.19	Tom1l2	chr11	protein_coding	target of myb1-like 2 (chicken)
chr11	60132171	60132644	-	60123783	60132644	A3SS	0.25	50	50	ENSMUST00000102683.11	ENSMUSG00000000538.19	Tom1l2	chr11	protein_coding	target of myb1-like 2 (chicken)
chr11	60152039;60153609	60153475;60165750	-	60152039;60161293	60161144;60165750	MXE	0.5	100	100	ENSMUST00000093048.13	ENSMUSG00000000538.19	Tom1l2	chr11	protein_coding	target of myb1-like 2 (chicken)
chr11	60132171	60132644	-	60129898	60132644	A3SS	0.25	50	50	ENSMUST00000133420.8	ENSMUSG00000000538.19	Tom1l2	chr11	protein_coding	target of myb1-like 2 (chicken)
chr11	60245026	60254290	+	60245026;60249642	60249444;60254290	ES	0.5	50	50	ENSMUST00000070805.13	ENSMUSG00000056598.17	Drc3	chr11	protein_coding	dynein regulatory complex subunit 3
chr11	60261441	60265904	+	60261441	60261603	3pMXE	0.5	50	50	ENSMUST00000070805.13	ENSMUSG00000056598.17	Drc3	chr11	protein_coding	dynein regulatory complex subunit 3
chr11	60300456	60309089	-	60300456	60307577	5pMXE	0.25	50	50	ENSMUST00000108721.9	ENSMUSG00000042709.16	Atpaf2	chr11	protein_coding	ATP synthase mitochondrial F1 complex assembly factor 2
chr11	60296703	60298120	-	60296682	60298120	A3SS	0.5	50	50	ENSMUST00000108721.9	ENSMUSG00000042709.16	Atpaf2	chr11	protein_coding	ATP synthase mitochondrial F1 complex assembly factor 2
chr11	60300456	60302493	-	60300456	60307577	A5SS	0.25	50	50	ENSMUST00000108721.9	ENSMUSG00000042709.16	Atpaf2	chr11	protein_coding	ATP synthase mitochondrial F1 complex assembly factor 2
chr11	60300456	60307812	-	60300456	60307577	A5SS	0.25	50	50	ENSMUST00000108721.9	ENSMUSG00000042709.16	Atpaf2	chr11	protein_coding	ATP synthase mitochondrial F1 complex assembly factor 2
chr11	60300456	60307812	-	60300456;60302555	60302493;60307812	ES	0.5	50	50	ENSMUST00000138696.8	ENSMUSG00000042709.16	Atpaf2	chr11	protein_coding	ATP synthase mitochondrial F1 complex assembly factor 2
chr11	60300456	60309089	-	60300456	60307812	5pMXE	0.25	50	50	ENSMUST00000154387.8	ENSMUSG00000042709.16	Atpaf2	chr11	protein_coding	ATP synthase mitochondrial F1 complex assembly factor 2
chr11	60300456	60302493	-	60300456	60309089	A5SS	0.25	50	50	ENSMUST00000141987.8	ENSMUSG00000042709.16	Atpaf2	chr11	protein_coding	ATP synthase mitochondrial F1 complex assembly factor 2
chr11	60345569	60347377	+	60345569	60351613	A3SS	0.5	50	50	ENSMUST00000147745.8	ENSMUSG00000020537.10	Drg2	chr11	protein_coding	developmentally regulated GTP binding protein 2
chr11	60350914	60351613	+	60345569	60351613	A5SS	0.5	50	50	ENSMUST00000147745.8	ENSMUSG00000020537.10	Drg2	chr11	protein_coding	developmentally regulated GTP binding protein 2
chr11	60360252	60372482	+	60360252;60370802	60367041;60372482	ES	0.33	50	50	ENSMUST00000071880.9	ENSMUSG00000042678.18	Myo15	chr11	protein_coding	myosin XV
chr11	60374632	60377977	+	60374632;60377724	60377719;60377977	ES	0.5	50	50	ENSMUST00000071880.9	ENSMUSG00000042678.18	Myo15	chr11	protein_coding	myosin XV
chr11	60387828	60388502	+	60387828;60388402	60388349;60388502	ES	0.5	50	50	ENSMUST00000071880.9	ENSMUSG00000042678.18	Myo15	chr11	protein_coding	myosin XV
chr11	60405855;60406157	60406107;60407974	+	60405855	60407974	cassetteExon	0.5	100	100	ENSMUST00000071880.9	ENSMUSG00000042678.18	Myo15	chr11	protein_coding	myosin XV
chr11	60371447	60372482	+	60370802	60372482	A5SS	0.33	50	50	ENSMUST00000071880.9	ENSMUSG00000042678.18	Myo15	chr11	protein_coding	myosin XV
chr11	60360252	60367041	+	60360252	60372482	A3SS	0.5	50	50	ENSMUST00000081823.12	ENSMUSG00000042678.18	Myo15	chr11	protein_coding	myosin XV
chr11	60370802	60372482	+	60360252	60372482	A5SS	0.33	50	50	ENSMUST00000081823.12	ENSMUSG00000042678.18	Myo15	chr11	protein_coding	myosin XV
chr11	60371447	60372482	+	60360252	60372482	A5SS	0.33	50	50	ENSMUST00000081823.12	ENSMUSG00000042678.18	Myo15	chr11	protein_coding	myosin XV
chr11	60430021	60438514	+	60427463	60438514	A5SS	0.5	50	50	ENSMUST00000134770.2	ENSMUSG00000042650.4	Alkbh5	chr11	protein_coding	alkB homolog 5, RNA demethylase
chr11	60621261	60621409	+	60621261	60621456	A3SS	0.5	50	50	ENSMUST00000018743.5	ENSMUSG00000018599.6	Mief2	chr11	protein_coding	mitochondrial elongation factor 2
chr11	60653367	60667748	-	60653367;60654251	60654192;60667748	ES	0.5	50	50	ENSMUST00000002891.11	ENSMUSG00000002814.16	Top3a	chr11	protein_coding	topoisomerase (DNA) III alpha
chr11	60680142	60680972	-	60680142;60680532	60680422;60680972	ES	0.5	50	50	ENSMUST00000018744.15	ENSMUSG00000020534.15	Shmt1	chr11	protein_coding	serine hydroxymethyltransferase 1 (soluble)
chr11	60683897	60688351	-	60683897;60685778	60685662;60688351	ES	0.5	50	50	ENSMUST00000018744.15	ENSMUSG00000020534.15	Shmt1	chr11	protein_coding	serine hydroxymethyltransferase 1 (soluble)
chr11	60692414	60695089	-	60692414;60692857	60692742;60695089	ES	0.5	50	50	ENSMUST00000018744.15	ENSMUSG00000020534.15	Shmt1	chr11	protein_coding	serine hydroxymethyltransferase 1 (soluble)
chr11	60695226	60697772	-	60695234	60697772	A3SS	0.5	50	50	ENSMUST00000018744.15	ENSMUSG00000020534.15	Shmt1	chr11	protein_coding	serine hydroxymethyltransferase 1 (soluble)
chr11	60689501	60690114	-	60689501	60692254	A5SS	0.5	50	50	ENSMUST00000018744.15	ENSMUSG00000020534.15	Shmt1	chr11	protein_coding	serine hydroxymethyltransferase 1 (soluble)
chr11	60692857	60693383	-	60692857	60695089	A5SS	0.5	50	50	ENSMUST00000018744.15	ENSMUSG00000020534.15	Shmt1	chr11	protein_coding	serine hydroxymethyltransferase 1 (soluble)
chr11	60683897	60688351	-	60683897	60685662	5pMXE	0.5	50	50	ENSMUST00000172804.8	ENSMUSG00000020534.15	Shmt1	chr11	protein_coding	serine hydroxymethyltransferase 1 (soluble)
chr11	60680142	60680972	-	60680532	60680972	3pMXE	0.5	50	50	ENSMUST00000135081.2	ENSMUSG00000020534.15	Shmt1	chr11	protein_coding	serine hydroxymethyltransferase 1 (soluble)
chr11	60756174	60769539	-	60756174;60766873	60766586;60769539	ES	0.5	50	50	ENSMUST00000168218.8	ENSMUSG00000043284.13	Tmem11	chr11	protein_coding	transmembrane protein 11
chr11	60797826	60805509	-	60797826	60804455	5pMXE	0.5	50	50	ENSMUST00000019075.4	ENSMUSG00000018931.4	Natd1	chr11	protein_coding	N-acetyltransferase domain containing 1
chr11	60835607	60837470	+	60835607;60836388	60836337;60837470	ES	0.5	50	50	ENSMUST00000019076.10	ENSMUSG00000018932.10	Map2k3	chr11	protein_coding	mitogen-activated protein kinase kinase 3
chr11	60833226	60833977	+	60833179	60833977	A5SS	0.5	50	50	ENSMUST00000019076.10	ENSMUSG00000018932.10	Map2k3	chr11	protein_coding	mitogen-activated protein kinase kinase 3
chr11	60957776	60959954	+	60913676	60959954	A5SS	0.5	50	50	ENSMUST00000089184.11	ENSMUSG00000042529.15	Kcnj12	chr11	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 12
chr11	61017641;61019676	61019607;61031646	+	61017641	61031646	cassetteExon	0.5	100	100	ENSMUST00000010286.8	ENSMUSG00000010142.13	Tnfrsf13b	chr11	protein_coding	tumor necrosis factor receptor superfamily, member 13b
chr11	61033355	61037667	+	61032317	61037667	A5SS	0.33	50	50	ENSMUST00000010286.8	ENSMUSG00000010142.13	Tnfrsf13b	chr11	protein_coding	tumor necrosis factor receptor superfamily, member 13b
chr11	61033355	61038242	+	61037843	61038242	A5SS&ES	0.5	50	50	ENSMUST00000010286.8	ENSMUSG00000010142.13	Tnfrsf13b	chr11	protein_coding	tumor necrosis factor receptor superfamily, member 13b
chr11	61033631	61037667	+	61032317	61037667	A5SS	0.33	50	50	ENSMUST00000010286.8	ENSMUSG00000010142.13	Tnfrsf13b	chr11	protein_coding	tumor necrosis factor receptor superfamily, member 13b
chr11	61033355	61038242	+	61033355;61037843	61037667;61038242	ES	0.5	50	50	ENSMUST00000137832.8	ENSMUSG00000010142.13	Tnfrsf13b	chr11	protein_coding	tumor necrosis factor receptor superfamily, member 13b
chr11	61033631	61037667	+	61033355	61037667	A5SS	0.33	50	50	ENSMUST00000137832.8	ENSMUSG00000010142.13	Tnfrsf13b	chr11	protein_coding	tumor necrosis factor receptor superfamily, member 13b
chr11	61057798	61059086	-	61057610	61059086	A3SS	0.5	50	50	ENSMUST00000041683.9	ENSMUSG00000042506.16	Usp22	chr11	protein_coding	ubiquitin specific peptidase 22
chr11	61099607	61103053	+	61099739	61103053	A5SS	0.5	50	50	ENSMUST00000147792.2	ENSMUSG00000019102.11	Aldh3a1	chr11	protein_coding	aldehyde dehydrogenase family 3, subfamily A1
chr11	61156121	61158065	-	61156121	61157680	5pMXE	0.5	50	50	ENSMUST00000066277.10	ENSMUSG00000010025.20	Aldh3a2	chr11	protein_coding	aldehyde dehydrogenase family 3, subfamily A2
chr11	61137147	61139688	-	61115512	61139688	A3SS	0.25	50	50	ENSMUST00000066277.10	ENSMUSG00000010025.20	Aldh3a2	chr11	protein_coding	aldehyde dehydrogenase family 3, subfamily A2
chr11	61138867	61139688	-	61115512	61139688	A3SS	0.25	50	50	ENSMUST00000066277.10	ENSMUSG00000010025.20	Aldh3a2	chr11	protein_coding	aldehyde dehydrogenase family 3, subfamily A2
chr11	61139308	61139688	-	61115512	61139688	A3SS	0.25	50	50	ENSMUST00000066277.10	ENSMUSG00000010025.20	Aldh3a2	chr11	protein_coding	aldehyde dehydrogenase family 3, subfamily A2
chr11	61144578	61147565	-	61144616	61147565	A3SS	0.5	50	50	ENSMUST00000066277.10	ENSMUSG00000010025.20	Aldh3a2	chr11	protein_coding	aldehyde dehydrogenase family 3, subfamily A2
chr11	61137147	61139688	-	61137147;61138867	61138755;61139688	ES	0.33	50	50	ENSMUST00000208086.2	ENSMUSG00000010025.20	Aldh3a2	chr11	protein_coding	aldehyde dehydrogenase family 3, subfamily A2
chr11	61139308	61139688	-	61138867	61139688	A3SS	0.33	50	50	ENSMUST00000208086.2	ENSMUSG00000010025.20	Aldh3a2	chr11	protein_coding	aldehyde dehydrogenase family 3, subfamily A2
chr11	61139308	61139688	-	61137147	61139688	A3SS	0.25	50	50	ENSMUST00000074127.14	ENSMUSG00000010025.20	Aldh3a2	chr11	protein_coding	aldehyde dehydrogenase family 3, subfamily A2
chr11	61156121;61157840	61157680;61158065	-	61156121	61158065	cassetteExon	0.5	100	100	ENSMUST00000147291.8	ENSMUSG00000010025.20	Aldh3a2	chr11	protein_coding	aldehyde dehydrogenase family 3, subfamily A2
chr11	61264282	61269005	-	61264282	61268739	5pMXE	0.5	50	50	ENSMUST00000010267.10	ENSMUSG00000010122.15	Slc47a1	chr11	protein_coding	solute carrier family 47, member 1
chr11	61254317;61257720	61257355;61258499	-	61254317	61258499	cassetteExon	0.5	100	100	ENSMUST00000010267.10	ENSMUSG00000010122.15	Slc47a1	chr11	protein_coding	solute carrier family 47, member 1
chr11	61254317	61256268	-	61254317	61258499	A5SS	0.33	50	50	ENSMUST00000010267.10	ENSMUSG00000010122.15	Slc47a1	chr11	protein_coding	solute carrier family 47, member 1
chr11	61254317	61256268	-	61254317	61257355	A5SS	0.33	50	50	ENSMUST00000131723.8	ENSMUSG00000010122.15	Slc47a1	chr11	protein_coding	solute carrier family 47, member 1
chr11	61343739	61344445	-	61343739;61344322	61344254;61344445	ES	0.25	50	50	ENSMUST00000060255.14	ENSMUSG00000010086.18	Rnf112	chr11	protein_coding	ring finger protein 112
chr11	61343773	61344254	-	61343739	61344254	A3SS	0.5	50	50	ENSMUST00000060255.14	ENSMUSG00000010086.18	Rnf112	chr11	protein_coding	ring finger protein 112
chr11	61343773	61344445	-	61344322	61344445	A3SS&ES	0.25	50	50	ENSMUST00000060255.14	ENSMUSG00000010086.18	Rnf112	chr11	protein_coding	ring finger protein 112
chr11	61343797	61344445	-	61344322	61344445	A3SS&ES	0.25	50	50	ENSMUST00000060255.14	ENSMUSG00000010086.18	Rnf112	chr11	protein_coding	ring finger protein 112
chr11	61343773	61344445	-	61343739	61344445	A3SS	0.25	50	50	ENSMUST00000102661.4	ENSMUSG00000010086.18	Rnf112	chr11	protein_coding	ring finger protein 112
chr11	61343797	61344445	-	61343739	61344445	A3SS	0.25	50	50	ENSMUST00000102661.4	ENSMUSG00000010086.18	Rnf112	chr11	protein_coding	ring finger protein 112
chr11	61343773;61344322	61344254;61344445	-	61343773	61344445	cassetteExon	0.5	100	100	ENSMUST00000152137.8	ENSMUSG00000010086.18	Rnf112	chr11	protein_coding	ring finger protein 112
chr11	61343797	61344445	-	61343773	61344445	A3SS	0.25	50	50	ENSMUST00000152137.8	ENSMUSG00000010086.18	Rnf112	chr11	protein_coding	ring finger protein 112
chr11	61343739	61344445	-	61344322	61344445	A3SS&ES	0.25	50	50	ENSMUST00000126859.8	ENSMUSG00000010086.18	Rnf112	chr11	protein_coding	ring finger protein 112
chr11	61376381	61376547	+	61376311	61376547	A5SS	0.33	50	50	ENSMUST00000064783.10	ENSMUSG00000042436.13	Mfap4	chr11	protein_coding	microfibrillar-associated protein 4
chr11	61376444	61376547	+	61376311	61376547	A5SS	0.33	50	50	ENSMUST00000064783.10	ENSMUSG00000042436.13	Mfap4	chr11	protein_coding	microfibrillar-associated protein 4
chr11	61376444	61376547	+	61376381	61376547	A5SS	0.33	50	50	ENSMUST00000127073.8	ENSMUSG00000042436.13	Mfap4	chr11	protein_coding	microfibrillar-associated protein 4
chr11	61381330	61381533	-	61381330	61381434	A5SS	0.5	50	50	ENSMUST00000152755.8	ENSMUSG00000001034.18	Mapk7	chr11	protein_coding	mitogen-activated protein kinase 7
chr11	61382512	61383676	-	61382512	61383730	A5SS	0.5	50	50	ENSMUST00000152755.8	ENSMUSG00000001034.18	Mapk7	chr11	protein_coding	mitogen-activated protein kinase 7
chr11	61383895	61384350	-	61383895	61384332	A5SS	0.25	50	50	ENSMUST00000152755.8	ENSMUSG00000001034.18	Mapk7	chr11	protein_coding	mitogen-activated protein kinase 7
chr11	61383895	61384423	-	61383895	61384332	A5SS	0.25	50	50	ENSMUST00000152755.8	ENSMUSG00000001034.18	Mapk7	chr11	protein_coding	mitogen-activated protein kinase 7
chr11	61383895	61384473	-	61383895	61384332	A5SS	0.25	50	50	ENSMUST00000152755.8	ENSMUSG00000001034.18	Mapk7	chr11	protein_coding	mitogen-activated protein kinase 7
chr11	61383887	61384350	-	61384011	61384350	A3SS	0.33	50	50	ENSMUST00000101085.9	ENSMUSG00000001034.18	Mapk7	chr11	protein_coding	mitogen-activated protein kinase 7
chr11	61383895	61384350	-	61384011	61384350	A3SS	0.33	50	50	ENSMUST00000101085.9	ENSMUSG00000001034.18	Mapk7	chr11	protein_coding	mitogen-activated protein kinase 7
chr11	61384780	61385161	-	61384780	61384906	5pMXE	0.5	50	50	ENSMUST00000125840.8	ENSMUSG00000001034.18	Mapk7	chr11	protein_coding	mitogen-activated protein kinase 7
chr11	61383895	61384350	-	61383887	61384350	A3SS	0.33	50	50	ENSMUST00000125840.8	ENSMUSG00000001034.18	Mapk7	chr11	protein_coding	mitogen-activated protein kinase 7
chr11	61383887	61384473	-	61383887	61384350	A5SS	0.5	50	50	ENSMUST00000125840.8	ENSMUSG00000001034.18	Mapk7	chr11	protein_coding	mitogen-activated protein kinase 7
chr11	61383887	61384473	-	61383895	61384473	A3SS	0.5	50	50	ENSMUST00000079080.13	ENSMUSG00000001034.18	Mapk7	chr11	protein_coding	mitogen-activated protein kinase 7
chr11	61383895	61384350	-	61383895	61384473	A5SS	0.25	50	50	ENSMUST00000079080.13	ENSMUSG00000001034.18	Mapk7	chr11	protein_coding	mitogen-activated protein kinase 7
chr11	61383895	61384423	-	61383895	61384473	A5SS	0.25	50	50	ENSMUST00000079080.13	ENSMUSG00000001034.18	Mapk7	chr11	protein_coding	mitogen-activated protein kinase 7
chr11	61383895	61384350	-	61383895	61384423	A5SS	0.25	50	50	ENSMUST00000108714.2	ENSMUSG00000001034.18	Mapk7	chr11	protein_coding	mitogen-activated protein kinase 7
chr11	61397238	61399898	+	61397238;61398565	61398454;61399898	ES	0.5	50	50	ENSMUST00000102657.10	ENSMUSG00000001039.13	B9d1	chr11	protein_coding	B9 protein domain 1
chr11	61398565	61400296	+	61398565;61399994	61399898;61400296	ES	0.5	50	50	ENSMUST00000102657.10	ENSMUSG00000001039.13	B9d1	chr11	protein_coding	B9 protein domain 1
chr11	61399994	61400266	+	61399994	61400296	A3SS	0.5	50	50	ENSMUST00000102657.10	ENSMUSG00000001039.13	B9d1	chr11	protein_coding	B9 protein domain 1
chr11	61397238;61399994	61399898;61400296	+	61397238;61398565	61398454;61400296	MXE	0.5	100	100	ENSMUST00000140548.8	ENSMUSG00000001039.13	B9d1	chr11	protein_coding	B9 protein domain 1
chr11	61397238	61399898	+	61397238	61398454	3pMXE	0.5	50	50	ENSMUST00000138057.8	ENSMUSG00000001039.13	B9d1	chr11	protein_coding	B9 protein domain 1
chr11	61437737	61470393	-	61437737;61438809	61438696;61470393	ES	0.25	50	50	ENSMUST00000108711.8	ENSMUSG00000001036.18	Epn2	chr11	protein_coding	epsin 2
chr11	61424507;61425439	61425404;61426097	-	61424507	61426097	cassetteExon	0.5	100	100	ENSMUST00000108711.8	ENSMUSG00000001036.18	Epn2	chr11	protein_coding	epsin 2
chr11	61426209;61435154	61434984;61436976	-	61426209	61436976	cassetteExon	0.5	100	100	ENSMUST00000108711.8	ENSMUSG00000001036.18	Epn2	chr11	protein_coding	epsin 2
chr11	61437737;61456720	61456648;61470393	-	61437737;61438809	61438696;61470393	MXE	0.5	100	100	ENSMUST00000108711.8	ENSMUSG00000001036.18	Epn2	chr11	protein_coding	epsin 2
chr11	61468149	61470393	-	61438809	61470393	A3SS	0.25	50	50	ENSMUST00000108711.8	ENSMUSG00000001036.18	Epn2	chr11	protein_coding	epsin 2
chr11	61423518	61424397	-	61423518	61424415	A5SS	0.5	50	50	ENSMUST00000108711.8	ENSMUSG00000001036.18	Epn2	chr11	protein_coding	epsin 2
chr11	61437737	61438834	-	61437737	61438696	A5SS&ES	0.25	50	50	ENSMUST00000108711.8	ENSMUSG00000001036.18	Epn2	chr11	protein_coding	epsin 2
chr11	61437737;61456720	61456648;61470393	-	61437737	61470393	cassetteExon	0.5	100	100	ENSMUST00000001063.15	ENSMUSG00000001036.18	Epn2	chr11	protein_coding	epsin 2
chr11	61468149	61470393	-	61437737	61470393	A3SS	0.25	50	50	ENSMUST00000001063.15	ENSMUSG00000001036.18	Epn2	chr11	protein_coding	epsin 2
chr11	61437737	61438834	-	61437737	61470393	A5SS	0.25	50	50	ENSMUST00000001063.15	ENSMUSG00000001036.18	Epn2	chr11	protein_coding	epsin 2
chr11	61437737;61438868	61438696;61456648	-	61437737	61456648	cassetteExon	0.5	100	100	ENSMUST00000179936.8	ENSMUSG00000001036.18	Epn2	chr11	protein_coding	epsin 2
chr11	61437737;61438868	61438834;61456648	-	61437737	61456648	cassetteExon	0.5	100	100	ENSMUST00000179936.8	ENSMUSG00000001036.18	Epn2	chr11	protein_coding	epsin 2
chr11	61444405	61456648	-	61437737	61456648	A3SS	0.33	50	50	ENSMUST00000179936.8	ENSMUSG00000001036.18	Epn2	chr11	protein_coding	epsin 2
chr11	61468149	61470393	-	61456720	61470393	A3SS	0.25	50	50	ENSMUST00000179936.8	ENSMUSG00000001036.18	Epn2	chr11	protein_coding	epsin 2
chr11	61426209	61436976	-	61426209	61434984	5pMXE	0.5	50	50	ENSMUST00000153984.2	ENSMUSG00000001036.18	Epn2	chr11	protein_coding	epsin 2
chr11	61424507	61426097	-	61425439	61426097	3pMXE	0.5	50	50	ENSMUST00000151545.2	ENSMUSG00000001036.18	Epn2	chr11	protein_coding	epsin 2
chr11	61437737;61438809	61438696;61470393	-	61437737;61456720	61438834;61470393	MXE	0.5	100	100	ENSMUST00000147501.8	ENSMUSG00000001036.18	Epn2	chr11	protein_coding	epsin 2
chr11	61438868;61444405	61444336;61456648	-	61438868	61456648	cassetteExon	0.5	100	100	ENSMUST00000147501.8	ENSMUSG00000001036.18	Epn2	chr11	protein_coding	epsin 2
chr11	61560002	61560662	+	61555133	61560662	A5SS	0.5	50	50	ENSMUST00000004959.3	ENSMUSG00000004837.3	Grap	chr11	protein_coding	GRB2-related adaptor protein
chr11	61598825	61600417	-	61598825;61600185	61600105;61600417	ES	0.5	50	50	ENSMUST00000128196.2	ENSMUSG00000042371.13	Slc5a10	chr11	protein_coding	solute carrier family 5 (sodium/glucose cotransporter), member 10
chr11	61607142	61610668	-	61607142	61611348	A5SS	0.5	50	50	ENSMUST00000128196.2	ENSMUSG00000042371.13	Slc5a10	chr11	protein_coding	solute carrier family 5 (sodium/glucose cotransporter), member 10
chr11	61643759	61647021	-	61643759;61646288	61646236;61647021	ES	0.5	50	50	ENSMUST00000168115.8	ENSMUSG00000020528.15	Prpsap2	chr11	protein_coding	phosphoribosyl pyrophosphate synthetase-associated protein 2
chr11	61647171;61647503	61647408;61652780	-	61647171	61652780	cassetteExon	0.5	100	100	ENSMUST00000168115.8	ENSMUSG00000020528.15	Prpsap2	chr11	protein_coding	phosphoribosyl pyrophosphate synthetase-associated protein 2
chr11	61652400	61652780	-	61647171	61652780	A3SS	0.33	50	50	ENSMUST00000168115.8	ENSMUSG00000020528.15	Prpsap2	chr11	protein_coding	phosphoribosyl pyrophosphate synthetase-associated protein 2
chr11	61647503;61652400	61652306;61652780	-	61647503	61652780	cassetteExon	0.5	100	100	ENSMUST00000151966.8	ENSMUSG00000020528.15	Prpsap2	chr11	protein_coding	phosphoribosyl pyrophosphate synthetase-associated protein 2
chr11	61643759	61647021	-	61646288	61647021	3pMXE	0.5	50	50	ENSMUST00000123575.2	ENSMUSG00000020528.15	Prpsap2	chr11	protein_coding	phosphoribosyl pyrophosphate synthetase-associated protein 2
chr11	61812825	61813608	-	61807092	61813608	A3SS	0.5	50	50	ENSMUST00000102650.10	ENSMUSG00000047804.16	Akap10	chr11	protein_coding	A kinase (PRKA) anchor protein 10
chr11	61933901	61964522	+	61933901	62008526	A3SS	0.5	50	50	ENSMUST00000201866.4	ENSMUSG00000042331.14	Specc1	chr11	protein_coding	sperm antigen with calponin homology and coiled-coil domains 1
chr11	61867034	61920079	+	61847715	61920079	A5SS	0.25	50	50	ENSMUST00000201866.4	ENSMUSG00000042331.14	Specc1	chr11	protein_coding	sperm antigen with calponin homology and coiled-coil domains 1
chr11	61896297	61920079	+	61847715	61920079	A5SS	0.25	50	50	ENSMUST00000201866.4	ENSMUSG00000042331.14	Specc1	chr11	protein_coding	sperm antigen with calponin homology and coiled-coil domains 1
chr11	61909713	61920079	+	61847715	61920079	A5SS	0.25	50	50	ENSMUST00000201866.4	ENSMUSG00000042331.14	Specc1	chr11	protein_coding	sperm antigen with calponin homology and coiled-coil domains 1
chr11	61968062	62008526	+	61933901	62008526	A5SS	0.5	50	50	ENSMUST00000201866.4	ENSMUSG00000042331.14	Specc1	chr11	protein_coding	sperm antigen with calponin homology and coiled-coil domains 1
chr11	62023307	62037132	+	62023307	62028876	3pMXE	0.5	50	50	ENSMUST00000201671.4	ENSMUSG00000042331.14	Specc1	chr11	protein_coding	sperm antigen with calponin homology and coiled-coil domains 1
chr11	61968062	62019026	+	62010108	62019026	A5SS&ES	0.5	50	50	ENSMUST00000201671.4	ENSMUSG00000042331.14	Specc1	chr11	protein_coding	sperm antigen with calponin homology and coiled-coil domains 1
chr11	62023280	62028876	+	62023307	62028876	A5SS	0.5	50	50	ENSMUST00000201671.4	ENSMUSG00000042331.14	Specc1	chr11	protein_coding	sperm antigen with calponin homology and coiled-coil domains 1
chr11	62023280	62037132	+	62023280	62028876	3pMXE	0.5	50	50	ENSMUST00000202178.4	ENSMUSG00000042331.14	Specc1	chr11	protein_coding	sperm antigen with calponin homology and coiled-coil domains 1
chr11	62023280	62037132	+	62023307	62037132	A5SS	0.5	50	50	ENSMUST00000202389.4	ENSMUSG00000042331.14	Specc1	chr11	protein_coding	sperm antigen with calponin homology and coiled-coil domains 1
chr11	61896297	61920079	+	61867034	61920079	A5SS	0.25	50	50	ENSMUST00000202869.2	ENSMUSG00000042331.14	Specc1	chr11	protein_coding	sperm antigen with calponin homology and coiled-coil domains 1
chr11	61909713	61920079	+	61867034	61920079	A5SS	0.25	50	50	ENSMUST00000202869.2	ENSMUSG00000042331.14	Specc1	chr11	protein_coding	sperm antigen with calponin homology and coiled-coil domains 1
chr11	61909713	61920079	+	61896297	61920079	A5SS	0.25	50	50	ENSMUST00000201624.4	ENSMUSG00000042331.14	Specc1	chr11	protein_coding	sperm antigen with calponin homology and coiled-coil domains 1
chr11	61968062	62019026	+	61968062;62010108	62008526;62019026	ES	0.5	50	50	ENSMUST00000092415.9	ENSMUSG00000042331.14	Specc1	chr11	protein_coding	sperm antigen with calponin homology and coiled-coil domains 1
chr11	61968062	62008526	+	61968062	62019026	A3SS	0.5	50	50	ENSMUST00000201015.4	ENSMUSG00000042331.14	Specc1	chr11	protein_coding	sperm antigen with calponin homology and coiled-coil domains 1
chr11	62204004	62206703	+	62204004	62204836	3pMXE	0.33	50	50	ENSMUST00000101075.11	ENSMUSG00000042298.19	Ttc19	chr11	protein_coding	tetratricopeptide repeat domain 19
chr11	62204004	62218724	+	62204004	62204836	3pMXE	0.33	50	50	ENSMUST00000101075.11	ENSMUSG00000042298.19	Ttc19	chr11	protein_coding	tetratricopeptide repeat domain 19
chr11	62174533;62174995	62174957;62175829	+	62174533	62175829	cassetteExon	0.5	100	100	ENSMUST00000101075.11	ENSMUSG00000042298.19	Ttc19	chr11	protein_coding	tetratricopeptide repeat domain 19
chr11	62204004;62206794	62206703;62218724	+	62204004	62218724	cassetteExon	0.5	100	100	ENSMUST00000162385.2	ENSMUSG00000042298.19	Ttc19	chr11	protein_coding	tetratricopeptide repeat domain 19
chr11	62236144	62242204	-	62236144;62240319	62240179;62242204	ES	0.5	50	50	ENSMUST00000101066.10	ENSMUSG00000018501.18	Ncor1	chr11	protein_coding	nuclear receptor co-repressor 1
chr11	62249841;62250760	62250587;62257790	-	62249841	62257790	cassetteExon	0.5	100	100	ENSMUST00000101066.10	ENSMUSG00000018501.18	Ncor1	chr11	protein_coding	nuclear receptor co-repressor 1
chr11	62292093;62294288	62294262;62294625	-	62292093	62294625	cassetteExon	0.5	100	100	ENSMUST00000101066.10	ENSMUSG00000018501.18	Ncor1	chr11	protein_coding	nuclear receptor co-repressor 1
chr11	62210251	62211822	-	62210368	62211822	A3SS	0.5	50	50	ENSMUST00000101066.10	ENSMUSG00000018501.18	Ncor1	chr11	protein_coding	nuclear receptor co-repressor 1
chr11	62218072	62220267	-	62218075	62220267	A3SS	0.5	50	50	ENSMUST00000101066.10	ENSMUSG00000018501.18	Ncor1	chr11	protein_coding	nuclear receptor co-repressor 1
chr11	62229894	62231234	-	62229891	62231234	A3SS	0.5	50	50	ENSMUST00000101066.10	ENSMUSG00000018501.18	Ncor1	chr11	protein_coding	nuclear receptor co-repressor 1
chr11	62233956	62235458	-	62234177	62235458	A3SS	0.5	50	50	ENSMUST00000101066.10	ENSMUSG00000018501.18	Ncor1	chr11	protein_coding	nuclear receptor co-repressor 1
chr11	62244869	62245197	-	62244160	62245197	A3SS	0.5	50	50	ENSMUST00000101066.10	ENSMUSG00000018501.18	Ncor1	chr11	protein_coding	nuclear receptor co-repressor 1
chr11	62264280	62267461	-	62264448	62267461	A3SS	0.33	50	50	ENSMUST00000101066.10	ENSMUSG00000018501.18	Ncor1	chr11	protein_coding	nuclear receptor co-repressor 1
chr11	62264400	62267461	-	62264448	62267461	A3SS	0.33	50	50	ENSMUST00000101066.10	ENSMUSG00000018501.18	Ncor1	chr11	protein_coding	nuclear receptor co-repressor 1
chr11	62275671	62280517	-	62275668	62280517	A3SS	0.5	50	50	ENSMUST00000101066.10	ENSMUSG00000018501.18	Ncor1	chr11	protein_coding	nuclear receptor co-repressor 1
chr11	62236144	62240221	-	62236144	62240179	A5SS	0.33	50	50	ENSMUST00000101066.10	ENSMUSG00000018501.18	Ncor1	chr11	protein_coding	nuclear receptor co-repressor 1
chr11	62244160	62245209	-	62244160	62245197	A5SS	0.5	50	50	ENSMUST00000101066.10	ENSMUSG00000018501.18	Ncor1	chr11	protein_coding	nuclear receptor co-repressor 1
chr11	62267587	62269323	-	62267587	62269341	A5SS	0.5	50	50	ENSMUST00000101066.10	ENSMUSG00000018501.18	Ncor1	chr11	protein_coding	nuclear receptor co-repressor 1
chr11	62329341	62348262	-	62329341	62347974	5pMXE	0.33	50	50	ENSMUST00000018645.13	ENSMUSG00000018501.18	Ncor1	chr11	protein_coding	nuclear receptor co-repressor 1
chr11	62329341	62349281	-	62329341	62347974	5pMXE	0.33	50	50	ENSMUST00000018645.13	ENSMUSG00000018501.18	Ncor1	chr11	protein_coding	nuclear receptor co-repressor 1
chr11	62236144;62240319	62240221;62242204	-	62236144	62242204	cassetteExon	0.5	100	100	ENSMUST00000155712.9	ENSMUSG00000018501.18	Ncor1	chr11	protein_coding	nuclear receptor co-repressor 1
chr11	62249841	62257790	-	62249841	62250587	5pMXE	0.5	50	50	ENSMUST00000037575.15	ENSMUSG00000018501.18	Ncor1	chr11	protein_coding	nuclear receptor co-repressor 1
chr11	62264400	62267461	-	62264280	62267461	A3SS	0.33	50	50	ENSMUST00000101067.10	ENSMUSG00000018501.18	Ncor1	chr11	protein_coding	nuclear receptor co-repressor 1
chr11	62324525	62329164	-	62310606	62329164	A3SS	0.5	50	50	ENSMUST00000101068.9	ENSMUSG00000018501.18	Ncor1	chr11	protein_coding	nuclear receptor co-repressor 1
chr11	62310606	62313701	-	62310606	62329164	A5SS	0.5	50	50	ENSMUST00000101068.9	ENSMUSG00000018501.18	Ncor1	chr11	protein_coding	nuclear receptor co-repressor 1
chr11	62329341	62349281	-	62329341	62348262	5pMXE	0.33	50	50	ENSMUST00000127471.9	ENSMUSG00000018501.18	Ncor1	chr11	protein_coding	nuclear receptor co-repressor 1
chr11	62292093	62294625	-	62294288	62294625	3pMXE	0.5	50	50	ENSMUST00000069456.11	ENSMUSG00000018501.18	Ncor1	chr11	protein_coding	nuclear receptor co-repressor 1
chr11	62398620;62400198	62400105;62400646	+	62398620	62400646	cassetteExon	0.5	100	100	ENSMUST00000014389.6	ENSMUSG00000014245.9	Pigl	chr11	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class L
chr11	62424780;62424969	62424872;62427108	-	62424780	62427108	cassetteExon	0.5	100	100	ENSMUST00000018653.8	ENSMUSG00000018509.9	Cenpv	chr11	protein_coding	centromere protein V
chr11	62424780;62425048	62424872;62427108	-	62424780	62427108	cassetteExon	0.5	100	100	ENSMUST00000018653.8	ENSMUSG00000018509.9	Cenpv	chr11	protein_coding	centromere protein V
chr11	62427206	62429144	-	62427206	62429682	A5SS	0.33	50	50	ENSMUST00000018653.8	ENSMUSG00000018509.9	Cenpv	chr11	protein_coding	centromere protein V
chr11	62427206	62429205	-	62427206	62429682	A5SS	0.33	50	50	ENSMUST00000018653.8	ENSMUSG00000018509.9	Cenpv	chr11	protein_coding	centromere protein V
chr11	62427206	62429144	-	62427206	62429205	A5SS	0.33	50	50	ENSMUST00000123542.8	ENSMUSG00000018509.9	Cenpv	chr11	protein_coding	centromere protein V
chr11	62424969	62427108	-	62425048	62427108	A3SS	0.33	50	50	ENSMUST00000123181.2	ENSMUSG00000018509.9	Cenpv	chr11	protein_coding	centromere protein V
chr11	62424780	62427108	-	62424969	62427108	3pMXE	0.33	50	50	ENSMUST00000138772.2	ENSMUSG00000018509.9	Cenpv	chr11	protein_coding	centromere protein V
chr11	62442677	62442966	+	62442421	62442966	A5SS	0.5	50	50	ENSMUST00000019649.4	ENSMUSG00000019505.8	Ubb	chr11	protein_coding	ubiquitin B
chr11	62467122	62469129	+	62466951	62469129	A5SS	0.5	50	50	ENSMUST00000151195.8	ENSMUSG00000018507.17	Trpv2	chr11	protein_coding	transient receptor potential cation channel, subfamily V, member 2
chr11	62497072	62511260	-	62497072;62500141	62500029;62511260	ES	0.5	50	50	ENSMUST00000057194.9	ENSMUSG00000046417.15	Lrrc75a	chr11	protein_coding	leucine rich repeat containing 75A
chr11	62511388	62538771	-	62511388	62538971	A5SS	0.5	50	50	ENSMUST00000057194.9	ENSMUSG00000046417.15	Lrrc75a	chr11	protein_coding	leucine rich repeat containing 75A
chr11	62496677	62497489	+	62496677	62497434	A3SS	0.5	50	50	ENSMUST00000128647.2	ENSMUSG00000085762.2	Lrrc75aos2	chr11	lncRNA	leucine rich repeat containing 75A, opposite strand 2
chr11	62539682	62555496	+	62539642	62555496	A5SS	0.16	50	50	ENSMUST00000062860.5	ENSMUSG00000048497.12	Mmgt2	chr11	protein_coding	membrane magnesium transporter 2
chr11	62539967	62555496	+	62539642	62555496	A5SS	0.16	50	50	ENSMUST00000062860.5	ENSMUSG00000048497.12	Mmgt2	chr11	protein_coding	membrane magnesium transporter 2
chr11	62540374	62555496	+	62539642	62555496	A5SS	0.16	50	50	ENSMUST00000062860.5	ENSMUSG00000048497.12	Mmgt2	chr11	protein_coding	membrane magnesium transporter 2
chr11	62540417	62555496	+	62539642	62555496	A5SS	0.16	50	50	ENSMUST00000062860.5	ENSMUSG00000048497.12	Mmgt2	chr11	protein_coding	membrane magnesium transporter 2
chr11	62551195	62555496	+	62539642	62555496	A5SS	0.16	50	50	ENSMUST00000062860.5	ENSMUSG00000048497.12	Mmgt2	chr11	protein_coding	membrane magnesium transporter 2
chr11	62539682	62550990	+	62539682;62540374	62540273;62550990	ES	0.5	50	50	ENSMUST00000148707.8	ENSMUSG00000048497.12	Mmgt2	chr11	protein_coding	membrane magnesium transporter 2
chr11	62540374	62555496	+	62540374	62550990	3pMXE	0.5	50	50	ENSMUST00000148707.8	ENSMUSG00000048497.12	Mmgt2	chr11	protein_coding	membrane magnesium transporter 2
chr11	62539682	62555496	+	62539682;62551195	62550990;62555496	ES	0.2	50	50	ENSMUST00000148696.2	ENSMUSG00000048497.12	Mmgt2	chr11	protein_coding	membrane magnesium transporter 2
chr11	62539682;62540374	62540273;62555496	+	62539682;62551195	62550990;62555496	MXE	0.5	100	100	ENSMUST00000148696.2	ENSMUSG00000048497.12	Mmgt2	chr11	protein_coding	membrane magnesium transporter 2
chr11	62539682;62540417	62540273;62555496	+	62539682;62551195	62550990;62555496	MXE	0.5	100	100	ENSMUST00000148696.2	ENSMUSG00000048497.12	Mmgt2	chr11	protein_coding	membrane magnesium transporter 2
chr11	62539967	62555496	+	62551195	62555496	A5SS&ES	0.2	50	50	ENSMUST00000148696.2	ENSMUSG00000048497.12	Mmgt2	chr11	protein_coding	membrane magnesium transporter 2
chr11	62539682	62555496	+	62539967	62555496	A5SS	0.16	50	50	ENSMUST00000142112.2	ENSMUSG00000048497.12	Mmgt2	chr11	protein_coding	membrane magnesium transporter 2
chr11	62540374	62555496	+	62539967	62555496	A5SS	0.16	50	50	ENSMUST00000142112.2	ENSMUSG00000048497.12	Mmgt2	chr11	protein_coding	membrane magnesium transporter 2
chr11	62540417	62555496	+	62539967	62555496	A5SS	0.16	50	50	ENSMUST00000142112.2	ENSMUSG00000048497.12	Mmgt2	chr11	protein_coding	membrane magnesium transporter 2
chr11	62539682	62555496	+	62539682;62540374	62540273;62555496	ES	0.2	50	50	ENSMUST00000127589.2	ENSMUSG00000048497.12	Mmgt2	chr11	protein_coding	membrane magnesium transporter 2
chr11	62540374;62551195	62550990;62555496	+	62540374	62555496	cassetteExon	0.5	100	100	ENSMUST00000127589.2	ENSMUSG00000048497.12	Mmgt2	chr11	protein_coding	membrane magnesium transporter 2
chr11	62540417	62555496	+	62540374	62555496	A5SS	0.2	50	50	ENSMUST00000127589.2	ENSMUSG00000048497.12	Mmgt2	chr11	protein_coding	membrane magnesium transporter 2
chr11	62539682;62540417	62540273;62555496	+	62539682	62555496	cassetteExon	0.5	100	100	ENSMUST00000155759.3	ENSMUSG00000048497.12	Mmgt2	chr11	protein_coding	membrane magnesium transporter 2
chr11	62539682	62555496	+	62540417	62555496	5pMXE	0.16	50	50	ENSMUST00000129162.3	ENSMUSG00000048497.12	Mmgt2	chr11	protein_coding	membrane magnesium transporter 2
chr11	62551195	62555496	+	62540417	62555496	A5SS	0.16	50	50	ENSMUST00000129162.3	ENSMUSG00000048497.12	Mmgt2	chr11	protein_coding	membrane magnesium transporter 2
chr11	62606202	62615623	-	62603045	62615623	A3SS	0.33	50	50	ENSMUST00000150336.8	ENSMUSG00000005267.14	Zfp287	chr11	protein_coding	zinc finger protein 287
chr11	62613759	62615623	-	62603045	62615623	A3SS	0.33	50	50	ENSMUST00000150336.8	ENSMUSG00000005267.14	Zfp287	chr11	protein_coding	zinc finger protein 287
chr11	62603045	62604491	-	62603045	62615623	A5SS	0.5	50	50	ENSMUST00000150336.8	ENSMUSG00000005267.14	Zfp287	chr11	protein_coding	zinc finger protein 287
chr11	62603045	62615623	-	62603045;62606202	62604491;62615623	ES	0.33	50	50	ENSMUST00000149228.8	ENSMUSG00000005267.14	Zfp287	chr11	protein_coding	zinc finger protein 287
chr11	62613759	62615623	-	62606202	62615623	A3SS	0.33	50	50	ENSMUST00000149228.8	ENSMUSG00000005267.14	Zfp287	chr11	protein_coding	zinc finger protein 287
chr11	62646678	62674498	-	62646678	62651066	5pMXE	0.5	50	50	ENSMUST00000207474.2	ENSMUSG00000047342.18	Zfp286	chr11	protein_coding	zinc finger protein 286
chr11	62650075	62651066	-	62646678	62651066	A3SS	0.5	50	50	ENSMUST00000207474.2	ENSMUSG00000047342.18	Zfp286	chr11	protein_coding	zinc finger protein 286
chr11	62671725	62674498	-	62646678	62674498	A3SS	0.33	50	50	ENSMUST00000207597.2	ENSMUSG00000047342.18	Zfp286	chr11	protein_coding	zinc finger protein 286
chr11	62671910	62674498	-	62646678	62674498	A3SS	0.33	50	50	ENSMUST00000207597.2	ENSMUSG00000047342.18	Zfp286	chr11	protein_coding	zinc finger protein 286
chr11	62675835	62678785	-	62675819	62678785	A3SS	0.33	50	50	ENSMUST00000207597.2	ENSMUSG00000047342.18	Zfp286	chr11	protein_coding	zinc finger protein 286
chr11	62678870	62679955	-	62678870	62679756	A5SS&ES	0.5	50	50	ENSMUST00000207597.2	ENSMUSG00000047342.18	Zfp286	chr11	protein_coding	zinc finger protein 286
chr11	62675819	62678785	-	62644508	62678785	A3SS	0.33	50	50	ENSMUST00000139798.8	ENSMUSG00000047342.18	Zfp286	chr11	protein_coding	zinc finger protein 286
chr11	62675835	62678785	-	62644508	62678785	A3SS	0.33	50	50	ENSMUST00000139798.8	ENSMUSG00000047342.18	Zfp286	chr11	protein_coding	zinc finger protein 286
chr11	62644508	62646614	-	62644508	62678785	A5SS	0.5	50	50	ENSMUST00000139798.8	ENSMUSG00000047342.18	Zfp286	chr11	protein_coding	zinc finger protein 286
chr11	62671910	62674498	-	62671725	62674498	A3SS	0.33	50	50	ENSMUST00000054654.13	ENSMUSG00000047342.18	Zfp286	chr11	protein_coding	zinc finger protein 286
chr11	62738621	62741398	+	62731570	62741398	A5SS	0.5	50	50	ENSMUST00000072639.10	ENSMUSG00000047821.17	Trim16	chr11	protein_coding	tripartite motif-containing 16
chr11	62711463	62711558	+	62711463	62711561	A3SS	0.5	50	50	ENSMUST00000147942.2	ENSMUSG00000047821.17	Trim16	chr11	protein_coding	tripartite motif-containing 16
chr11	62744218	62746112	+	62744218;62745125	62745096;62746112	ES	0.5	50	50	ENSMUST00000036085.11	ENSMUSG00000090173.9	Fbxw10	chr11	protein_coding	F-box and WD-40 domain protein 10
chr11	62764318	62765768	+	62764355	62765768	A5SS	0.33	50	50	ENSMUST00000036085.11	ENSMUSG00000090173.9	Fbxw10	chr11	protein_coding	F-box and WD-40 domain protein 10
chr11	62764370	62765768	+	62764355	62765768	A5SS	0.33	50	50	ENSMUST00000036085.11	ENSMUSG00000090173.9	Fbxw10	chr11	protein_coding	F-box and WD-40 domain protein 10
chr11	62764370	62765768	+	62764318	62765768	A5SS	0.33	50	50	ENSMUST00000177336.8	ENSMUSG00000090173.9	Fbxw10	chr11	protein_coding	F-box and WD-40 domain protein 10
chr11	62770542	62772763	+	62770421	62772763	A5SS	0.5	50	50	ENSMUST00000014321.5	ENSMUSG00000014177.11	Tvp23b	chr11	protein_coding	trans-golgi network vesicle protein 23B
chr11	62775991	62777015	+	62775991	62807458	A3SS	0.5	50	50	ENSMUST00000140377.2	ENSMUSG00000014177.11	Tvp23b	chr11	protein_coding	trans-golgi network vesicle protein 23B
chr11	62891691	62892931	-	62882054	62892931	A3SS	0.5	50	50	ENSMUST00000153180.8	ENSMUSG00000087604.8	Cdrt4os1	chr11	lncRNA	CMT1A duplicated region transcript 4, opposite strand 1
chr11	63023523	63023951	+	63022480	63023951	A5SS	0.33	50	50	ENSMUST00000018361.10	ENSMUSG00000018217.13	Pmp22	chr11	protein_coding	peripheral myelin protein 22
chr11	63023827	63023951	+	63022480	63023951	A5SS	0.33	50	50	ENSMUST00000018361.10	ENSMUSG00000018217.13	Pmp22	chr11	protein_coding	peripheral myelin protein 22
chr11	63023827	63023951	+	63023523	63023951	A5SS	0.33	50	50	ENSMUST00000108701.8	ENSMUSG00000018217.13	Pmp22	chr11	protein_coding	peripheral myelin protein 22
chr11	63970603;63970840	63970685;63973479	+	63970603	63973479	cassetteExon	0.5	100	100	ENSMUST00000135037.8	ENSMUSG00000087497.8	2810001G20Rik	chr11	lncRNA	RIKEN cDNA 2810001G20 gene
chr11	64883185	64883268	+	64883185	64883265	A3SS	0.5	50	50	ENSMUST00000071891.12	ENSMUSG00000020549.15	Elac2	chr11	protein_coding	elaC ribonuclease Z 2
chr11	64870095	64870544	+	64870157	64870544	A5SS	0.5	50	50	ENSMUST00000071891.12	ENSMUSG00000020549.15	Elac2	chr11	protein_coding	elaC ribonuclease Z 2
chr11	64883180	64883265	+	64883185	64883265	A5SS	0.5	50	50	ENSMUST00000071891.12	ENSMUSG00000020549.15	Elac2	chr11	protein_coding	elaC ribonuclease Z 2
chr11	64894276	64898889	-	64894276;64896331	64896280;64898889	ES	0.5	50	50	ENSMUST00000047463.15	ENSMUSG00000033389.17	Arhgap44	chr11	protein_coding	Rho GTPase activating protein 44
chr11	64902924;64903750	64903733;64912767	-	64902924	64912767	cassetteExon	0.5	100	100	ENSMUST00000047463.15	ENSMUSG00000033389.17	Arhgap44	chr11	protein_coding	Rho GTPase activating protein 44
chr11	64966036	65053291	-	64966036	65053412	A5SS	0.5	50	50	ENSMUST00000047463.15	ENSMUSG00000033389.17	Arhgap44	chr11	protein_coding	Rho GTPase activating protein 44
chr11	65044219	65050695	-	65044219	65050694	A5SS	0.5	50	50	ENSMUST00000020855.5	ENSMUSG00000020548.11	1700086D15Rik	chr11	protein_coding	RIKEN cDNA 1700086D15 gene
chr11	65074314;65075457	65075314;65077745	-	65074314	65077745	cassetteExon	0.5	100	100	ENSMUST00000102635.10	ENSMUSG00000020542.19	Myocd	chr11	protein_coding	myocardin
chr11	65114615;65119687	65119644;65123945	-	65114615	65123945	cassetteExon	0.5	100	100	ENSMUST00000102635.10	ENSMUSG00000020542.19	Myocd	chr11	protein_coding	myocardin
chr11	65095248	65096256	-	65095248	65109355	A5SS	0.5	50	50	ENSMUST00000102635.10	ENSMUSG00000020542.19	Myocd	chr11	protein_coding	myocardin
chr11	65178008	65180199	-	65178008	65178097	5pMXE	0.5	50	50	ENSMUST00000128453.8	ENSMUSG00000085162.8	Gm12295	chr11	lncRNA	predicted gene 12295
chr11	65176854	65177846	-	65176771	65177846	A3SS	0.5	50	50	ENSMUST00000128453.8	ENSMUSG00000085162.8	Gm12295	chr11	lncRNA	predicted gene 12295
chr11	65582599	65587114	-	65582599;65584396	65584248;65587114	ES	0.5	50	50	ENSMUST00000046963.10	ENSMUSG00000033352.12	Map2k4	chr11	protein_coding	mitogen-activated protein kinase kinase 4
chr11	65600809	65610310	-	65600809;65603123	65603004;65610310	ES	0.5	50	50	ENSMUST00000046963.10	ENSMUSG00000033352.12	Map2k4	chr11	protein_coding	mitogen-activated protein kinase kinase 4
chr11	65610429	65647095	-	65610429;65626192	65626018;65647095	ES	0.5	50	50	ENSMUST00000046963.10	ENSMUSG00000033352.12	Map2k4	chr11	protein_coding	mitogen-activated protein kinase kinase 4
chr11	65647197;65666591	65666559;65678962	-	65647197	65678962	cassetteExon	0.5	100	100	ENSMUST00000046963.10	ENSMUSG00000033352.12	Map2k4	chr11	protein_coding	mitogen-activated protein kinase kinase 4
chr11	65626192	65636378	-	65626192	65647095	A5SS	0.5	50	50	ENSMUST00000046963.10	ENSMUSG00000033352.12	Map2k4	chr11	protein_coding	mitogen-activated protein kinase kinase 4
chr11	65600809	65610310	-	65603123	65610310	3pMXE	0.5	50	50	ENSMUST00000152096.8	ENSMUSG00000033352.12	Map2k4	chr11	protein_coding	mitogen-activated protein kinase kinase 4
chr11	65698087;65698890	65698791;65705191	+	65698087	65705191	cassetteExon	0.5	100	100	ENSMUST00000071465.9	ENSMUSG00000018347.17	Zkscan6	chr11	protein_coding	zinc finger with KRAB and SCAN domains 6
chr11	65742021	65750233	-	65742021;65746240	65746013;65750233	ES	0.5	50	50	ENSMUST00000080665.10	ENSMUSG00000056752.17	Dnah9	chr11	protein_coding	dynein, axonemal, heavy chain 9
chr11	65802852	65809550	-	65802852;65806050	65805862;65809550	ES	0.5	50	50	ENSMUST00000080665.10	ENSMUSG00000056752.17	Dnah9	chr11	protein_coding	dynein, axonemal, heavy chain 9
chr11	66047799	66050683	-	66047804	66050683	A3SS	0.5	50	50	ENSMUST00000080665.10	ENSMUSG00000056752.17	Dnah9	chr11	protein_coding	dynein, axonemal, heavy chain 9
chr11	65742021	65750233	-	65742021	65746013	5pMXE	0.5	50	50	ENSMUST00000136124.2	ENSMUSG00000056752.17	Dnah9	chr11	protein_coding	dynein, axonemal, heavy chain 9
chr11	66115818	66393478	-	66115818;66266080	66265985;66393478	ES	0.5	50	50	ENSMUST00000123454.8	ENSMUSG00000053930.14	Shisa6	chr11	protein_coding	shisa family member 6
chr11	66115818	66393478	-	66266080	66393478	3pMXE	0.5	50	50	ENSMUST00000134562.2	ENSMUSG00000053930.14	Shisa6	chr11	protein_coding	shisa family member 6
chr11	66847804;66854895	66854792;66854982	+	66847804	66854982	cassetteExon	0.5	100	100	ENSMUST00000211300.2	ENSMUSG00000085683.3	Tmem238l	chr11	protein_coding	transmembrane protein 238 like
chr11	66848931	66854982	+	66847804	66854982	A5SS	0.33	50	50	ENSMUST00000211300.2	ENSMUSG00000085683.3	Tmem238l	chr11	protein_coding	transmembrane protein 238 like
chr11	66848931	66854982	+	66854895	66854982	A5SS&ES	0.33	50	50	ENSMUST00000150220.2	ENSMUSG00000085683.3	Tmem238l	chr11	protein_coding	transmembrane protein 238 like
chr11	66916764	66920792	+	66916764;66917020	66916949;66920792	ES	0.5	50	50	ENSMUST00000079077.12	ENSMUSG00000050270.13	Tmem220	chr11	protein_coding	transmembrane protein 220
chr11	66932933	66943361	-	66932933;66942604	66942507;66943361	ES	0.25	50	50	ENSMUST00000146338.8	ENSMUSG00000020910.17	Adprm	chr11	protein_coding	ADP-ribose/CDP-alcohol diphosphatase, manganese dependent
chr11	66932933;66933862	66933745;66943361	-	66932933;66942604	66942507;66943361	MXE	0.5	100	100	ENSMUST00000146338.8	ENSMUSG00000020910.17	Adprm	chr11	protein_coding	ADP-ribose/CDP-alcohol diphosphatase, manganese dependent
chr11	66942740	66943361	-	66942604	66943361	A3SS	0.25	50	50	ENSMUST00000146338.8	ENSMUSG00000020910.17	Adprm	chr11	protein_coding	ADP-ribose/CDP-alcohol diphosphatase, manganese dependent
chr11	66931161	66932307	-	66931161	66932219	A5SS	0.5	50	50	ENSMUST00000146338.8	ENSMUSG00000020910.17	Adprm	chr11	protein_coding	ADP-ribose/CDP-alcohol diphosphatase, manganese dependent
chr11	66932933	66943361	-	66932933;66933862	66933745;66943361	ES	0.25	50	50	ENSMUST00000127407.2	ENSMUSG00000020910.17	Adprm	chr11	protein_coding	ADP-ribose/CDP-alcohol diphosphatase, manganese dependent
chr11	66932933;66942740	66942507;66943361	-	66932933;66933862	66933745;66943361	MXE	0.5	100	100	ENSMUST00000127407.2	ENSMUSG00000020910.17	Adprm	chr11	protein_coding	ADP-ribose/CDP-alcohol diphosphatase, manganese dependent
chr11	66932933;66942740	66942507;66943361	-	66932933	66943361	cassetteExon	0.5	100	100	ENSMUST00000148379.2	ENSMUSG00000020910.17	Adprm	chr11	protein_coding	ADP-ribose/CDP-alcohol diphosphatase, manganese dependent
chr11	66944691	66946557	+	66944691	66946542	A3SS	0.5	50	50	ENSMUST00000108690.10	ENSMUSG00000069844.13	Sco1	chr11	protein_coding	SCO1 cytochrome c oxidase assembly protein
chr11	66969150	66970804	+	66969150	66969921	A3SS&ES	0.5	50	50	ENSMUST00000108689.8	ENSMUSG00000020908.15	Myh3	chr11	protein_coding	myosin, heavy polypeptide 3, skeletal muscle, embryonic
chr11	67004943	67005607	-	67004943	67005480	A5SS	0.5	50	50	ENSMUST00000125538.8	ENSMUSG00000087410.8	2310065F04Rik	chr11	lncRNA	RIKEN cDNA 2310065F04 gene
chr11	67007326	67007476	-	67007326	67010583	A5SS	0.5	50	50	ENSMUST00000125538.8	ENSMUSG00000087410.8	2310065F04Rik	chr11	lncRNA	RIKEN cDNA 2310065F04 gene
chr11	67091268	67092672	+	67091268	67092668	A3SS	0.5	50	50	ENSMUST00000124516.8	ENSMUSG00000056328.15	Myh1	chr11	protein_coding	myosin, heavy polypeptide 1, skeletal muscle, adult
chr11	67115639	67127843	-	67103738	67127843	A3SS	0.5	50	50	ENSMUST00000145021.2	ENSMUSG00000085348.2	Myhas	chr11	lncRNA	myosin heavy chain gene antisense RNA
chr11	67115639	67127843	-	67115639	67119431	5pMXE	0.5	50	50	ENSMUST00000137662.2	ENSMUSG00000085348.2	Myhas	chr11	lncRNA	myosin heavy chain gene antisense RNA
chr11	67171101	67171253	+	67171101	67174078	A3SS	0.5	50	50	ENSMUST00000019625.12	ENSMUSG00000055775.17	Myh8	chr11	protein_coding	myosin, heavy polypeptide 8, skeletal muscle, perinatal
chr11	67212632;67213867	67213817;67217917	+	67212632	67217917	cassetteExon	0.5	100	100	ENSMUST00000108684.8	ENSMUSG00000060180.13	Myh13	chr11	protein_coding	myosin, heavy polypeptide 13, skeletal muscle
chr11	67520516	67543685	+	67520516;67534192	67534107;67543685	ES	0.5	50	50	ENSMUST00000108681.9	ENSMUSG00000033066.17	Gas7	chr11	protein_coding	growth arrest specific 7
chr11	67438477	67493934	+	67346600	67493934	A5SS	0.25	50	50	ENSMUST00000108681.9	ENSMUSG00000033066.17	Gas7	chr11	protein_coding	growth arrest specific 7
chr11	67477641	67493934	+	67346600	67493934	A5SS	0.25	50	50	ENSMUST00000108681.9	ENSMUSG00000033066.17	Gas7	chr11	protein_coding	growth arrest specific 7
chr11	67487525	67493934	+	67346600	67493934	A5SS	0.25	50	50	ENSMUST00000108681.9	ENSMUSG00000033066.17	Gas7	chr11	protein_coding	growth arrest specific 7
chr11	67438477	67441524	+	67438477	67493934	A3SS	0.5	50	50	ENSMUST00000041611.12	ENSMUSG00000033066.17	Gas7	chr11	protein_coding	growth arrest specific 7
chr11	67477641	67493934	+	67438477	67493934	A5SS	0.33	50	50	ENSMUST00000041611.12	ENSMUSG00000033066.17	Gas7	chr11	protein_coding	growth arrest specific 7
chr11	67487525	67493934	+	67438477	67493934	A5SS	0.33	50	50	ENSMUST00000041611.12	ENSMUSG00000033066.17	Gas7	chr11	protein_coding	growth arrest specific 7
chr11	67487525	67493934	+	67477641	67493934	A5SS	0.25	50	50	ENSMUST00000145496.2	ENSMUSG00000033066.17	Gas7	chr11	protein_coding	growth arrest specific 7
chr11	67633180;67635841	67635688;67637533	-	67633180	67637533	cassetteExon	0.5	100	100	ENSMUST00000021289.10	ENSMUSG00000049928.16	Glp2r	chr11	protein_coding	glucagon-like peptide 2 receptor
chr11	67600635	67603122	-	67555448	67603122	A3SS	0.5	50	50	ENSMUST00000021289.10	ENSMUSG00000049928.16	Glp2r	chr11	protein_coding	glucagon-like peptide 2 receptor
chr11	67671826	67673332	+	67665743	67673332	A5SS	0.5	50	50	ENSMUST00000181566.2	ENSMUSG00000097886.3	Gsg1l2	chr11	protein_coding	GSG1-like 2
chr11	67689605	67691956	+	67689605	67691465	3pMXE	0.33	50	50	ENSMUST00000123862.8	ENSMUSG00000033044.13	Dhrs7c	chr11	protein_coding	dehydrogenase/reductase (SDR family) member 7C
chr11	67689605	67700609	+	67689605	67691465	3pMXE	0.33	50	50	ENSMUST00000123862.8	ENSMUSG00000033044.13	Dhrs7c	chr11	protein_coding	dehydrogenase/reductase (SDR family) member 7C
chr11	67689229	67689524	+	67689229	67689446	A3SS	0.5	50	50	ENSMUST00000123862.8	ENSMUSG00000033044.13	Dhrs7c	chr11	protein_coding	dehydrogenase/reductase (SDR family) member 7C
chr11	67689605	67700609	+	67689605	67691956	3pMXE	0.33	50	50	ENSMUST00000149722.6	ENSMUSG00000033044.13	Dhrs7c	chr11	protein_coding	dehydrogenase/reductase (SDR family) member 7C
chr11	67689605;67691629	67691465;67691956	+	67689605	67691956	cassetteExon	0.5	100	100	ENSMUST00000149722.6	ENSMUSG00000033044.13	Dhrs7c	chr11	protein_coding	dehydrogenase/reductase (SDR family) member 7C
chr11	67789802;67794534	67794455;67795147	-	67789802	67795147	cassetteExon	0.5	100	100	ENSMUST00000021288.10	ENSMUSG00000020905.12	Usp43	chr11	protein_coding	ubiquitin specific peptidase 43
chr11	67767357	67770637	-	67767357	67770622	A5SS	0.5	50	50	ENSMUST00000021288.10	ENSMUSG00000020905.12	Usp43	chr11	protein_coding	ubiquitin specific peptidase 43
chr11	67804711	67811921	-	67804711	67812371	A5SS	0.5	50	50	ENSMUST00000021288.10	ENSMUSG00000020905.12	Usp43	chr11	protein_coding	ubiquitin specific peptidase 43
chr11	67816094	67817244	-	67816094	67817205	A5SS	0.5	50	50	ENSMUST00000021287.12	ENSMUSG00000020904.12	Cfap52	chr11	protein_coding	cilia and flagella associated protein 52
chr11	67875499	67877151	+	67875499	67902141	A3SS	0.5	50	50	ENSMUST00000021285.14	ENSMUSG00000020903.14	Stx8	chr11	protein_coding	syntaxin 8
chr11	67857539	67860598	+	67857343	67860598	A5SS	0.5	50	50	ENSMUST00000021285.14	ENSMUSG00000020903.14	Stx8	chr11	protein_coding	syntaxin 8
chr11	67864097	67902141	+	67875499	67902141	A5SS&ES	0.5	50	50	ENSMUST00000021285.14	ENSMUSG00000020903.14	Stx8	chr11	protein_coding	syntaxin 8
chr11	67864097	67864778	+	67864097	67902141	A3SS	0.5	50	50	ENSMUST00000129992.8	ENSMUSG00000020903.14	Stx8	chr11	protein_coding	syntaxin 8
chr11	68277010	68291211	-	68277010	68277436	5pMXE	0.5	50	50	ENSMUST00000021284.4	ENSMUSG00000020902.13	Ntn1	chr11	protein_coding	netrin 1
chr11	68323088	68330626	+	68323088	68364621	A3SS	0.5	50	50	ENSMUST00000021283.8	ENSMUSG00000020901.14	Pik3r5	chr11	protein_coding	phosphoinositide-3-kinase regulatory subunit 5
chr11	68384493	68384984	+	68384493	68384981	A3SS	0.5	50	50	ENSMUST00000021283.8	ENSMUSG00000020901.14	Pik3r5	chr11	protein_coding	phosphoinositide-3-kinase regulatory subunit 5
chr11	68427052	68430676	+	68427052	68430725	A3SS	0.5	50	50	ENSMUST00000102613.8	ENSMUSG00000046207.15	Pik3r6	chr11	protein_coding	phosphoinositide-3-kinase regulatory subunit 5
chr11	68425109	68426930	+	68425097	68426930	A5SS	0.5	50	50	ENSMUST00000102613.8	ENSMUSG00000046207.15	Pik3r6	chr11	protein_coding	phosphoinositide-3-kinase regulatory subunit 5
chr11	68481899	68485357	+	68481899;68485201	68484980;68485357	ES	0.5	50	50	ENSMUST00000154294.8	ENSMUSG00000045915.16	Ccdc42	chr11	protein_coding	coiled-coil domain containing 42
chr11	68481899	68485357	+	68485201	68485357	5pMXE	0.5	50	50	ENSMUST00000102612.2	ENSMUSG00000045915.16	Ccdc42	chr11	protein_coding	coiled-coil domain containing 42
chr11	68583008	68590036	+	68582668	68590036	A5SS	0.25	50	50	ENSMUST00000141558.2	ENSMUSG00000020900.16	Myh10	chr11	protein_coding	myosin, heavy polypeptide 10, non-muscle
chr11	68583385	68590036	+	68582668	68590036	A5SS	0.25	50	50	ENSMUST00000141558.2	ENSMUSG00000020900.16	Myh10	chr11	protein_coding	myosin, heavy polypeptide 10, non-muscle
chr11	68585633	68590036	+	68582668	68590036	A5SS	0.25	50	50	ENSMUST00000141558.2	ENSMUSG00000020900.16	Myh10	chr11	protein_coding	myosin, heavy polypeptide 10, non-muscle
chr11	68583008;68585633	68585572;68590036	+	68583008	68590036	cassetteExon	0.5	100	100	ENSMUST00000102611.10	ENSMUSG00000020900.16	Myh10	chr11	protein_coding	myosin, heavy polypeptide 10, non-muscle
chr11	68636245;68636790	68636761;68642768	+	68636245	68642768	cassetteExon	0.5	100	100	ENSMUST00000102611.10	ENSMUSG00000020900.16	Myh10	chr11	protein_coding	myosin, heavy polypeptide 10, non-muscle
chr11	68662812;68666253	68666191;68673932	+	68662812	68673932	cassetteExon	0.5	100	100	ENSMUST00000102611.10	ENSMUSG00000020900.16	Myh10	chr11	protein_coding	myosin, heavy polypeptide 10, non-muscle
chr11	68583385	68590036	+	68583008	68590036	A5SS	0.25	50	50	ENSMUST00000102611.10	ENSMUSG00000020900.16	Myh10	chr11	protein_coding	myosin, heavy polypeptide 10, non-muscle
chr11	68583385	68590036	+	68585633	68590036	A5SS&ES	0.33	50	50	ENSMUST00000143032.2	ENSMUSG00000020900.16	Myh10	chr11	protein_coding	myosin, heavy polypeptide 10, non-muscle
chr11	68636245	68642768	+	68636245	68636761	3pMXE	0.5	50	50	ENSMUST00000108673.8	ENSMUSG00000020900.16	Myh10	chr11	protein_coding	myosin, heavy polypeptide 10, non-muscle
chr11	68675822	68676022	+	68675822	68680931	A3SS	0.5	50	50	ENSMUST00000145408.2	ENSMUSG00000020900.16	Myh10	chr11	protein_coding	myosin, heavy polypeptide 10, non-muscle
chr11	68678370	68680931	+	68675822	68680931	A5SS	0.5	50	50	ENSMUST00000145408.2	ENSMUSG00000020900.16	Myh10	chr11	protein_coding	myosin, heavy polypeptide 10, non-muscle
chr11	68736250	68750749	-	68736250	68743768	5pMXE	0.25	50	50	ENSMUST00000018880.14	ENSMUSG00000018736.15	Ndel1	chr11	protein_coding	nudE neurodevelopment protein 1 like 1
chr11	68736250	68755748	-	68736250	68743768	5pMXE	0.25	50	50	ENSMUST00000018880.14	ENSMUSG00000018736.15	Ndel1	chr11	protein_coding	nudE neurodevelopment protein 1 like 1
chr11	68736250	68762607	-	68736250	68743768	5pMXE	0.25	50	50	ENSMUST00000018880.14	ENSMUSG00000018736.15	Ndel1	chr11	protein_coding	nudE neurodevelopment protein 1 like 1
chr11	68713491;68717030	68716996;68720741	-	68713491	68720741	cassetteExon	0.5	100	100	ENSMUST00000018880.14	ENSMUSG00000018736.15	Ndel1	chr11	protein_coding	nudE neurodevelopment protein 1 like 1
chr11	68736250	68750749	-	68736250	68762607	A5SS	0.25	50	50	ENSMUST00000101017.9	ENSMUSG00000018736.15	Ndel1	chr11	protein_coding	nudE neurodevelopment protein 1 like 1
chr11	68736250	68755748	-	68736250	68762607	A5SS	0.25	50	50	ENSMUST00000101017.9	ENSMUSG00000018736.15	Ndel1	chr11	protein_coding	nudE neurodevelopment protein 1 like 1
chr11	68736250	68755748	-	68736250	68750749	5pMXE	0.25	50	50	ENSMUST00000144300.8	ENSMUSG00000018736.15	Ndel1	chr11	protein_coding	nudE neurodevelopment protein 1 like 1
chr11	68794145	68797412	+	68794145	68795191	3pMXE	0.5	50	50	ENSMUST00000073471.13	ENSMUSG00000060938.15	Rpl26	chr11	protein_coding	ribosomal protein L26
chr11	68792583	68793096	+	68792450	68793096	A5SS	0.33	50	50	ENSMUST00000073471.13	ENSMUSG00000060938.15	Rpl26	chr11	protein_coding	ribosomal protein L26
chr11	68792638	68793096	+	68792450	68793096	A5SS	0.33	50	50	ENSMUST00000073471.13	ENSMUSG00000060938.15	Rpl26	chr11	protein_coding	ribosomal protein L26
chr11	68793262	68794005	+	68793268	68794005	A5SS	0.5	50	50	ENSMUST00000073471.13	ENSMUSG00000060938.15	Rpl26	chr11	protein_coding	ribosomal protein L26
chr11	68792583	68793096	+	68792638	68793096	A5SS	0.33	50	50	ENSMUST00000101014.9	ENSMUSG00000060938.15	Rpl26	chr11	protein_coding	ribosomal protein L26
chr11	68813771	68817344	-	68813840	68817344	A3SS	0.5	50	50	ENSMUST00000038932.14	ENSMUSG00000032921.14	Odf4	chr11	protein_coding	outer dense fiber of sperm tails 4
chr11	68817639	68817747	-	68817642	68817747	A3SS	0.5	50	50	ENSMUST00000038932.14	ENSMUSG00000032921.14	Odf4	chr11	protein_coding	outer dense fiber of sperm tails 4
chr11	68813380	68813645	-	68813380	68813667	A5SS	0.5	50	50	ENSMUST00000038932.14	ENSMUSG00000032921.14	Odf4	chr11	protein_coding	outer dense fiber of sperm tails 4
chr11	68813414	68813645	-	68813380	68813645	A3SS	0.5	50	50	ENSMUST00000130271.8	ENSMUSG00000032921.14	Odf4	chr11	protein_coding	outer dense fiber of sperm tails 4
chr11	68837296	68837810	-	68837296;68837469	68837387;68837810	ES	0.5	50	50	ENSMUST00000065040.13	ENSMUSG00000052921.14	Arhgef15	chr11	protein_coding	Rho guanine nucleotide exchange factor (GEF) 15
chr11	68838222	68838592	-	68838222;68838494	68838402;68838592	ES	0.5	50	50	ENSMUST00000065040.13	ENSMUSG00000052921.14	Arhgef15	chr11	protein_coding	Rho guanine nucleotide exchange factor (GEF) 15
chr11	68838222	68838592	-	68838222	68838402	5pMXE	0.5	50	50	ENSMUST00000141747.2	ENSMUSG00000052921.14	Arhgef15	chr11	protein_coding	Rho guanine nucleotide exchange factor (GEF) 15
chr11	68861615	68862022	+	68861615	68862010	A3SS	0.5	50	50	ENSMUST00000102606.10	ENSMUSG00000018740.15	Slc25a35	chr11	protein_coding	solute carrier family 25, member 35
chr11	68863567	68863769	-	68863567	68863710	A5SS	0.5	50	50	ENSMUST00000138362.8	ENSMUSG00000032892.15	Rangrf	chr11	protein_coding	RAN guanine nucleotide release factor
chr11	68864383	68865894	-	68864383	68864468	5pMXE	0.5	50	50	ENSMUST00000132093.8	ENSMUSG00000032892.15	Rangrf	chr11	protein_coding	RAN guanine nucleotide release factor
chr11	68863854	68863964	-	68863854	68863943	A5SS	0.33	50	50	ENSMUST00000132093.8	ENSMUSG00000032892.15	Rangrf	chr11	protein_coding	RAN guanine nucleotide release factor
chr11	68864099	68864232	-	68864099	68864267	A5SS	0.5	50	50	ENSMUST00000132093.8	ENSMUSG00000032892.15	Rangrf	chr11	protein_coding	RAN guanine nucleotide release factor
chr11	68863854	68864100	-	68863854	68863943	A5SS	0.33	50	50	ENSMUST00000143444.8	ENSMUSG00000032892.15	Rangrf	chr11	protein_coding	RAN guanine nucleotide release factor
chr11	68863854	68863964	-	68863854	68864100	A5SS	0.33	50	50	ENSMUST00000156178.8	ENSMUSG00000032892.15	Rangrf	chr11	protein_coding	RAN guanine nucleotide release factor
chr11	68883864	68884392	-	68883864;68884284	68884123;68884392	ES	0.5	50	50	ENSMUST00000021282.12	ENSMUSG00000020899.17	Pfas	chr11	protein_coding	phosphoribosylformylglycinamidine synthase (FGAR amidotransferase)
chr11	68883864	68884392	-	68884284	68884392	A3SS	0.5	50	50	ENSMUST00000172915.8	ENSMUSG00000020899.17	Pfas	chr11	protein_coding	phosphoribosylformylglycinamidine synthase (FGAR amidotransferase)
chr11	68921832	68922240	+	68921832;68922015	68921926;68922240	ES	0.33	50	50	ENSMUST00000021278.14	ENSMUSG00000020898.19	Ctc1	chr11	protein_coding	CTS telomere maintenance complex component 1
chr11	68906991;68911491	68911336;68911856	+	68906991	68911856	cassetteExon	0.5	100	100	ENSMUST00000021278.14	ENSMUSG00000020898.19	Ctc1	chr11	protein_coding	CTS telomere maintenance complex component 1
chr11	68918890;68919937	68919868;68920512	+	68918890	68920512	cassetteExon	0.5	100	100	ENSMUST00000021278.14	ENSMUSG00000020898.19	Ctc1	chr11	protein_coding	CTS telomere maintenance complex component 1
chr11	68912019	68913219	+	68912019	68913203	A3SS	0.5	50	50	ENSMUST00000021278.14	ENSMUSG00000020898.19	Ctc1	chr11	protein_coding	CTS telomere maintenance complex component 1
chr11	68922015	68922237	+	68922015	68922240	A3SS	0.5	50	50	ENSMUST00000021278.14	ENSMUSG00000020898.19	Ctc1	chr11	protein_coding	CTS telomere maintenance complex component 1
chr11	68906940	68911856	+	68906991	68911856	A5SS	0.33	50	50	ENSMUST00000021278.14	ENSMUSG00000020898.19	Ctc1	chr11	protein_coding	CTS telomere maintenance complex component 1
chr11	68911941	68913203	+	68912019	68913203	A5SS	0.5	50	50	ENSMUST00000021278.14	ENSMUSG00000020898.19	Ctc1	chr11	protein_coding	CTS telomere maintenance complex component 1
chr11	68922139	68922240	+	68922015	68922240	A5SS	0.33	50	50	ENSMUST00000021278.14	ENSMUSG00000020898.19	Ctc1	chr11	protein_coding	CTS telomere maintenance complex component 1
chr11	68911491	68911856	+	68906940	68911856	A5SS	0.33	50	50	ENSMUST00000161455.8	ENSMUSG00000020898.19	Ctc1	chr11	protein_coding	CTS telomere maintenance complex component 1
chr11	68921832	68922240	+	68921832	68921926	A3SS&ES	0.5	50	50	ENSMUST00000152979.8	ENSMUSG00000020898.19	Ctc1	chr11	protein_coding	CTS telomere maintenance complex component 1
chr11	68918890	68920512	+	68918890	68919868	3pMXE	0.5	50	50	ENSMUST00000161384.2	ENSMUSG00000020898.19	Ctc1	chr11	protein_coding	CTS telomere maintenance complex component 1
chr11	68918890	68920512	+	68919937	68920512	5pMXE	0.5	50	50	ENSMUST00000123871.2	ENSMUSG00000020898.19	Ctc1	chr11	protein_coding	CTS telomere maintenance complex component 1
chr11	68921832;68922139	68921926;68922240	+	68921832	68922240	cassetteExon	0.5	100	100	ENSMUST00000123871.2	ENSMUSG00000020898.19	Ctc1	chr11	protein_coding	CTS telomere maintenance complex component 1
chr11	68921832	68922240	+	68922139	68922240	5pMXE	0.33	50	50	ENSMUST00000154126.8	ENSMUSG00000020898.19	Ctc1	chr11	protein_coding	CTS telomere maintenance complex component 1
chr11	68936834	68938552	+	68936834	68938611	A3SS	0.5	50	50	ENSMUST00000108666.8	ENSMUSG00000020897.13	Aurkb	chr11	protein_coding	aurora kinase B
chr11	68961859	68962200	+	68961859;68962117	68962050;68962200	ES	0.5	50	50	ENSMUST00000075980.12	ENSMUSG00000020895.15	Tmem107	chr11	protein_coding	transmembrane protein 107
chr11	68962117	68962183	+	68962117	68962200	A3SS	0.33	50	50	ENSMUST00000075980.12	ENSMUSG00000020895.15	Tmem107	chr11	protein_coding	transmembrane protein 107
chr11	68961859	68963572	+	68961859	68962050	A3SS&ES	0.33	50	50	ENSMUST00000094081.5	ENSMUSG00000020895.15	Tmem107	chr11	protein_coding	transmembrane protein 107
chr11	68962117	68963572	+	68962117	68962200	A3SS&ES	0.33	50	50	ENSMUST00000094081.5	ENSMUSG00000020895.15	Tmem107	chr11	protein_coding	transmembrane protein 107
chr11	68961859	68962200	+	68961859	68962050	A3SS&ES	0.33	50	50	ENSMUST00000123821.8	ENSMUSG00000020895.15	Tmem107	chr11	protein_coding	transmembrane protein 107
chr11	68961859;68962117	68962050;68963572	+	68961859	68963572	cassetteExon	0.5	100	100	ENSMUST00000123038.2	ENSMUSG00000020895.15	Tmem107	chr11	protein_coding	transmembrane protein 107
chr11	68961859	68962200	+	68961859	68963572	A3SS	0.33	50	50	ENSMUST00000123038.2	ENSMUSG00000020895.15	Tmem107	chr11	protein_coding	transmembrane protein 107
chr11	68963345	68963572	+	68961859	68963572	A5SS	0.33	50	50	ENSMUST00000123038.2	ENSMUSG00000020895.15	Tmem107	chr11	protein_coding	transmembrane protein 107
chr11	68962117	68962183	+	68962117	68963572	A3SS	0.33	50	50	ENSMUST00000128323.2	ENSMUSG00000020895.15	Tmem107	chr11	protein_coding	transmembrane protein 107
chr11	68963345	68963572	+	68962117	68963572	A5SS	0.33	50	50	ENSMUST00000128323.2	ENSMUSG00000020895.15	Tmem107	chr11	protein_coding	transmembrane protein 107
chr11	68961859;68962117	68962050;68963572	+	68961859;68963345	68962200;68963572	MXE	0.5	100	100	ENSMUST00000146646.2	ENSMUSG00000020895.15	Tmem107	chr11	protein_coding	transmembrane protein 107
chr11	68994506	68994857	+	68994506;68994773	68994668;68994857	ES	0.5	50	50	ENSMUST00000101004.9	ENSMUSG00000020893.18	Per1	chr11	protein_coding	period circadian clock 1
chr11	68995247	68996216	+	68995247;68995639	68995460;68996216	ES	0.5	50	50	ENSMUST00000101004.9	ENSMUSG00000020893.18	Per1	chr11	protein_coding	period circadian clock 1
chr11	68992398	68992561	+	68992398	68992501	A3SS	0.5	50	50	ENSMUST00000101004.9	ENSMUSG00000020893.18	Per1	chr11	protein_coding	period circadian clock 1
chr11	68989834	68991335	+	68986129	68991335	A5SS	0.33	50	50	ENSMUST00000101004.9	ENSMUSG00000020893.18	Per1	chr11	protein_coding	period circadian clock 1
chr11	68991021	68991335	+	68986129	68991335	A5SS	0.33	50	50	ENSMUST00000101004.9	ENSMUSG00000020893.18	Per1	chr11	protein_coding	period circadian clock 1
chr11	68991021	68991335	+	68989834	68991335	A5SS	0.33	50	50	ENSMUST00000021271.14	ENSMUSG00000020893.18	Per1	chr11	protein_coding	period circadian clock 1
chr11	69025369	69026698	+	69025369;69026001	69025832;69026698	ES	0.5	50	50	ENSMUST00000021268.9	ENSMUSG00000020892.11	Aloxe3	chr11	protein_coding	arachidonate lipoxygenase 3
chr11	69024907	69024995	+	69024907	69024990	A3SS	0.5	50	50	ENSMUST00000021268.9	ENSMUSG00000020892.11	Aloxe3	chr11	protein_coding	arachidonate lipoxygenase 3
chr11	69025369	69026698	+	69025369	69025832	3pMXE	0.5	50	50	ENSMUST00000155324.9	ENSMUSG00000020892.11	Aloxe3	chr11	protein_coding	arachidonate lipoxygenase 3
chr11	69077458	69078489	-	69077458;69077661	69077575;69078489	ES	0.5	50	50	ENSMUST00000021262.10	ENSMUSG00000020891.12	Alox8	chr11	protein_coding	arachidonate 8-lipoxygenase
chr11	69112954	69113844	-	69109160	69113844	A3SS	0.5	50	50	ENSMUST00000108665.8	ENSMUSG00000020890.12	Gucy2e	chr11	protein_coding	guanylate cyclase 2e
chr11	69191141	69193920	-	69191141;69193792	69193678;69193920	ES	0.5	50	50	ENSMUST00000123176.8	ENSMUSG00000032782.20	Cntrob	chr11	protein_coding	centrobin, centrosomal BRCA2 interacting protein
chr11	69212245;69212759	69212675;69213516	-	69212245	69213516	cassetteExon	0.5	100	100	ENSMUST00000123176.8	ENSMUSG00000032782.20	Cntrob	chr11	protein_coding	centrobin, centrosomal BRCA2 interacting protein
chr11	69190700	69210179	-	69209870	69210179	A3SS&ES	0.5	50	50	ENSMUST00000123176.8	ENSMUSG00000032782.20	Cntrob	chr11	protein_coding	centrobin, centrosomal BRCA2 interacting protein
chr11	69199478	69200174	-	69199027	69200174	A3SS	0.5	50	50	ENSMUST00000123176.8	ENSMUSG00000032782.20	Cntrob	chr11	protein_coding	centrobin, centrosomal BRCA2 interacting protein
chr11	69191141	69193920	-	69193792	69193920	3pMXE	0.5	50	50	ENSMUST00000156175.2	ENSMUSG00000032782.20	Cntrob	chr11	protein_coding	centrobin, centrosomal BRCA2 interacting protein
chr11	69215291	69215680	+	69215291	69215650	A3SS	0.5	50	50	ENSMUST00000102602.8	ENSMUSG00000049299.15	Trappc1	chr11	protein_coding	trafficking protein particle complex 1
chr11	69215788	69216384	+	69215788	69216265	A3SS	0.5	50	50	ENSMUST00000102602.8	ENSMUSG00000049299.15	Trappc1	chr11	protein_coding	trafficking protein particle complex 1
chr11	69231806	69231985	+	69231884	69231985	A5SS	0.5	50	50	ENSMUST00000129321.2	ENSMUSG00000043419.12	Rnf227	chr11	protein_coding	ring finger protein 227
chr11	69236460	69237398	-	69236460	69237444	A5SS	0.5	50	50	ENSMUST00000122992.2	ENSMUSG00000018474.19	Chd3	chr11	protein_coding	chromodomain helicase DNA binding protein 3
chr11	69239347	69239747	-	69239347;69239637	69239536;69239747	ES	0.5	50	50	ENSMUST00000108661.8	ENSMUSG00000018474.19	Chd3	chr11	protein_coding	chromodomain helicase DNA binding protein 3
chr11	69246646	69247033	-	69246598	69247033	A3SS	0.5	50	50	ENSMUST00000108661.8	ENSMUSG00000018474.19	Chd3	chr11	protein_coding	chromodomain helicase DNA binding protein 3
chr11	69252050	69252211	-	69252068	69252211	A3SS	0.5	50	50	ENSMUST00000108661.8	ENSMUSG00000018474.19	Chd3	chr11	protein_coding	chromodomain helicase DNA binding protein 3
chr11	69252349	69252497	-	69252361	69252497	A3SS	0.5	50	50	ENSMUST00000108661.8	ENSMUSG00000018474.19	Chd3	chr11	protein_coding	chromodomain helicase DNA binding protein 3
chr11	69239347	69239747	-	69239347	69239536	5pMXE	0.5	50	50	ENSMUST00000238797.2	ENSMUSG00000018474.19	Chd3	chr11	protein_coding	chromodomain helicase DNA binding protein 3
chr11	69284694	69285454	-	69284626	69285454	A3SS	0.5	50	50	ENSMUST00000108660.8	ENSMUSG00000044795.13	Cyb5d1	chr11	protein_coding	cytochrome b5 domain containing 1
chr11	69286798	69287003	+	69286507	69287003	A5SS	0.5	50	50	ENSMUST00000142126.2	ENSMUSG00000059278.10	Naa38	chr11	protein_coding	N(alpha)-acetyltransferase 38, NatC auxiliary subunit
chr11	69286798	69286974	+	69286798	69287003	A3SS	0.5	50	50	ENSMUST00000144531.2	ENSMUSG00000059278.10	Naa38	chr11	protein_coding	N(alpha)-acetyltransferase 38, NatC auxiliary subunit
chr11	69407506;69407930	69407843;69409102	-	69407506	69409102	cassetteExon	0.5	100	100	ENSMUST00000035539.12	ENSMUSG00000005237.15	Dnah2	chr11	protein_coding	dynein, axonemal, heavy chain 2
chr11	69401877	69405502	-	69391684	69405502	A3SS	0.5	50	50	ENSMUST00000035539.12	ENSMUSG00000005237.15	Dnah2	chr11	protein_coding	dynein, axonemal, heavy chain 2
chr11	69408554	69409102	-	69407506	69409102	A3SS	0.33	50	50	ENSMUST00000035539.12	ENSMUSG00000005237.15	Dnah2	chr11	protein_coding	dynein, axonemal, heavy chain 2
chr11	69356215	69356377	-	69356215	69356407	A5SS	0.5	50	50	ENSMUST00000035539.12	ENSMUSG00000005237.15	Dnah2	chr11	protein_coding	dynein, axonemal, heavy chain 2
chr11	69368174	69368471	-	69368174	69368489	A5SS	0.5	50	50	ENSMUST00000035539.12	ENSMUSG00000005237.15	Dnah2	chr11	protein_coding	dynein, axonemal, heavy chain 2
chr11	69407930;69408554	69408397;69409102	-	69407930	69409102	cassetteExon	0.5	100	100	ENSMUST00000149991.2	ENSMUSG00000005237.15	Dnah2	chr11	protein_coding	dynein, axonemal, heavy chain 2
chr11	69453683	69454130	-	69453683	69454146	A5SS	0.5	50	50	ENSMUST00000155894.2	ENSMUSG00000041346.12	Wrap53	chr11	protein_coding	WD repeat containing, antisense to Trp53
chr11	69481588	69482176	+	69481588	69482080	A3SS	0.5	50	50	ENSMUST00000171247.8	ENSMUSG00000059552.14	Trp53	chr11	protein_coding	transformation related protein 53
chr11	69492449;69493156	69492750;69493251	-	69492449	69493251	cassetteExon	0.5	100	100	ENSMUST00000047889.13	ENSMUSG00000041329.14	Atp1b2	chr11	protein_coding	ATPase, Na+/K+ transporting, beta 2 polypeptide
chr11	69492449	69493251	-	69493156	69493251	3pMXE	0.5	50	50	ENSMUST00000153198.2	ENSMUSG00000041329.14	Atp1b2	chr11	protein_coding	ATPase, Na+/K+ transporting, beta 2 polypeptide
chr11	69506946	69507163	-	69506994	69507163	A3SS	0.5	50	50	ENSMUST00000005334.3	ENSMUSG00000005202.3	Shbg	chr11	protein_coding	sex hormone binding globulin
chr11	69548669	69549392	-	69548669;69548847	69548762;69549392	ES	0.25	50	50	ENSMUST00000018905.12	ENSMUSG00000018761.15	Mpdu1	chr11	protein_coding	mannose-P-dolichol utilization defect 1
chr11	69548037	69548762	-	69548669	69548762	A3SS&ES	0.5	50	50	ENSMUST00000018905.12	ENSMUSG00000018761.15	Mpdu1	chr11	protein_coding	mannose-P-dolichol utilization defect 1
chr11	69548882	69549392	-	69548847	69549392	A3SS	0.25	50	50	ENSMUST00000018905.12	ENSMUSG00000018761.15	Mpdu1	chr11	protein_coding	mannose-P-dolichol utilization defect 1
chr11	69548356;69548669	69548551;69549392	-	69548356	69549392	cassetteExon	0.5	100	100	ENSMUST00000129224.8	ENSMUSG00000018761.15	Mpdu1	chr11	protein_coding	mannose-P-dolichol utilization defect 1
chr11	69548356;69548847	69548551;69549392	-	69548356	69549392	cassetteExon	0.5	100	100	ENSMUST00000129224.8	ENSMUSG00000018761.15	Mpdu1	chr11	protein_coding	mannose-P-dolichol utilization defect 1
chr11	69548356;69548882	69548551;69549392	-	69548356	69549392	cassetteExon	0.5	100	100	ENSMUST00000129224.8	ENSMUSG00000018761.15	Mpdu1	chr11	protein_coding	mannose-P-dolichol utilization defect 1
chr11	69548669	69549392	-	69548669;69548882	69548762;69549392	ES	0.25	50	50	ENSMUST00000148242.8	ENSMUSG00000018761.15	Mpdu1	chr11	protein_coding	mannose-P-dolichol utilization defect 1
chr11	69548356	69549392	-	69548356	69548551	5pMXE	0.5	50	50	ENSMUST00000149764.8	ENSMUSG00000018761.15	Mpdu1	chr11	protein_coding	mannose-P-dolichol utilization defect 1
chr11	69548356	69549392	-	69548847	69549392	A3SS&ES	0.25	50	50	ENSMUST00000155200.8	ENSMUSG00000018761.15	Mpdu1	chr11	protein_coding	mannose-P-dolichol utilization defect 1
chr11	69548669	69549392	-	69548847	69549392	A3SS&ES	0.25	50	50	ENSMUST00000155200.8	ENSMUSG00000018761.15	Mpdu1	chr11	protein_coding	mannose-P-dolichol utilization defect 1
chr11	69548669	69549392	-	69548669	69548762	5pMXE	0.5	50	50	ENSMUST00000127118.2	ENSMUSG00000018761.15	Mpdu1	chr11	protein_coding	mannose-P-dolichol utilization defect 1
chr11	69556192	69556846	-	69556192;69556762	69556329;69556846	ES	0.5	50	50	ENSMUST00000018918.12	ENSMUSG00000018774.14	Cd68	chr11	protein_coding	CD68 antigen
chr11	69556192	69556302	-	69556192	69556329	A5SS	0.33	50	50	ENSMUST00000018918.12	ENSMUSG00000018774.14	Cd68	chr11	protein_coding	CD68 antigen
chr11	69556192;69556762	69556302;69556846	-	69556192	69556846	cassetteExon	0.5	100	100	ENSMUST00000154124.2	ENSMUSG00000018774.14	Cd68	chr11	protein_coding	CD68 antigen
chr11	69561573	69563105	-	69561573;69561802	69561754;69563105	ES	0.33	50	50	ENSMUST00000163666.3	ENSMUSG00000059796.17	Eif4a1	chr11	protein_coding	eukaryotic translation initiation factor 4A1
chr11	69561927	69563105	-	69561802	69563105	A3SS	0.33	50	50	ENSMUST00000163666.3	ENSMUSG00000059796.17	Eif4a1	chr11	protein_coding	eukaryotic translation initiation factor 4A1
chr11	69561802	69562431	-	69561802	69563105	A5SS	0.5	50	50	ENSMUST00000163666.3	ENSMUSG00000059796.17	Eif4a1	chr11	protein_coding	eukaryotic translation initiation factor 4A1
chr11	69561573;69561927	69561754;69563105	-	69561573	69563105	cassetteExon	0.5	100	100	ENSMUST00000139299.8	ENSMUSG00000059796.17	Eif4a1	chr11	protein_coding	eukaryotic translation initiation factor 4A1
chr11	69561573	69563105	-	69561573	69561754	5pMXE	0.5	50	50	ENSMUST00000145289.2	ENSMUSG00000059796.17	Eif4a1	chr11	protein_coding	eukaryotic translation initiation factor 4A1
chr11	69571676	69572815	-	69571676	69572489	5pMXE	0.5	50	50	ENSMUST00000005336.9	ENSMUSG00000005204.13	Senp3	chr11	protein_coding	SUMO/sentrin specific peptidase 3
chr11	69565432	69567448	-	69565432	69567916	A5SS	0.33	50	50	ENSMUST00000005336.9	ENSMUSG00000005204.13	Senp3	chr11	protein_coding	SUMO/sentrin specific peptidase 3
chr11	69565432	69569053	-	69565432	69567916	A5SS&ES	0.33	50	50	ENSMUST00000005336.9	ENSMUSG00000005204.13	Senp3	chr11	protein_coding	SUMO/sentrin specific peptidase 3
chr11	69565432	69567448	-	69565432	69569053	A5SS	0.33	50	50	ENSMUST00000134942.2	ENSMUSG00000005204.13	Senp3	chr11	protein_coding	SUMO/sentrin specific peptidase 3
chr11	69575499;69579264	69579186;69581576	+	69575499	69581576	cassetteExon	0.5	100	100	ENSMUST00000144033.2	ENSMUSG00000085890.8	Tnfsf13os	chr11	lncRNA	tumor necrosis factor (ligand) superfamily, member 13, opposite strand
chr11	69575159	69575311	-	69575162	69575311	A3SS	0.5	50	50	ENSMUST00000180587.8	ENSMUSG00000018752.20	Tnfsfm13	chr11	protein_coding	tumor necrosis factor (ligand) superfamily, membrane-bound member 13
chr11	69575159	69575486	-	69575358	69575486	A3SS&ES	0.5	50	50	ENSMUST00000180587.8	ENSMUSG00000018752.20	Tnfsfm13	chr11	protein_coding	tumor necrosis factor (ligand) superfamily, membrane-bound member 13
chr11	69586267	69586422	-	69586270	69586422	A3SS	0.5	50	50	ENSMUST00000180587.8	ENSMUSG00000018752.20	Tnfsfm13	chr11	protein_coding	tumor necrosis factor (ligand) superfamily, membrane-bound member 13
chr11	69575159	69575486	-	69575159;69575358	69575311;69575486	ES	0.5	50	50	ENSMUST00000174159.8	ENSMUSG00000018752.20	Tnfsfm13	chr11	protein_coding	tumor necrosis factor (ligand) superfamily, membrane-bound member 13
chr11	69577917	69578078	-	69575564	69578078	A3SS	0.5	50	50	ENSMUST00000108649.3	ENSMUSG00000018752.20	Tnfsfm13	chr11	protein_coding	tumor necrosis factor (ligand) superfamily, membrane-bound member 13
chr11	69575564	69575855	-	69575564	69578078	A5SS	0.5	50	50	ENSMUST00000108649.3	ENSMUSG00000018752.20	Tnfsfm13	chr11	protein_coding	tumor necrosis factor (ligand) superfamily, membrane-bound member 13
chr11	69626625	69626965	-	69626625;69626840	69626727;69626965	ES	0.5	50	50	ENSMUST00000058470.16	ENSMUSG00000005198.16	Polr2a	chr11	protein_coding	polymerase (RNA) II (DNA directed) polypeptide A
chr11	69666268	69666688	+	69666268	69666628	A3SS	0.5	50	50	ENSMUST00000108640.8	ENSMUSG00000018750.15	Zbtb4	chr11	protein_coding	zinc finger and BTB domain containing 4
chr11	69667715	69669013	+	69667715	69668298	A3SS	0.5	50	50	ENSMUST00000108640.8	ENSMUSG00000018750.15	Zbtb4	chr11	protein_coding	zinc finger and BTB domain containing 4
chr11	69657463	69666202	+	69656911	69666202	A5SS	0.33	50	50	ENSMUST00000108640.8	ENSMUSG00000018750.15	Zbtb4	chr11	protein_coding	zinc finger and BTB domain containing 4
chr11	69662113	69666202	+	69656911	69666202	A5SS	0.33	50	50	ENSMUST00000108640.8	ENSMUSG00000018750.15	Zbtb4	chr11	protein_coding	zinc finger and BTB domain containing 4
chr11	69657463;69662113	69662067;69666202	+	69657463	69666202	cassetteExon	0.5	100	100	ENSMUST00000132528.8	ENSMUSG00000018750.15	Zbtb4	chr11	protein_coding	zinc finger and BTB domain containing 4
chr11	69685839	69686648	-	69685839;69686560	69686421;69686648	ES	0.5	50	50	ENSMUST00000045971.9	ENSMUSG00000041189.10	Chrnb1	chr11	protein_coding	cholinergic receptor, nicotinic, beta polypeptide 1 (muscle)
chr11	69689588	69690178	-	69689504	69690178	A3SS	0.5	50	50	ENSMUST00000011285.11	ENSMUSG00000042826.14	Fgf11	chr11	protein_coding	fibroblast growth factor 11
chr11	69719340	69724808	-	69719340;69721439	69721389;69724808	ES	0.5	50	50	ENSMUST00000056484.10	ENSMUSG00000051790.16	Nlgn2	chr11	protein_coding	neuroligin 2
chr11	69729475	69729746	+	69729399	69729746	A5SS	0.5	50	50	ENSMUST00000133967.8	ENSMUSG00000070394.11	Tmem256	chr11	protein_coding	transmembrane protein 256
chr11	69737517	69737734	+	69737348	69737734	A5SS	0.5	50	50	ENSMUST00000108632.8	ENSMUSG00000019461.13	Plscr3	chr11	protein_coding	phospholipid scramblase 3
chr11	69744122	69744407	-	69744107	69744407	A3SS	0.5	50	50	ENSMUST00000001626.10	ENSMUSG00000001583.14	Tnk1	chr11	protein_coding	tyrosine kinase, non-receptor, 1
chr11	69749335	69749475	-	69749335	69749533	A5SS	0.5	50	50	ENSMUST00000001626.10	ENSMUSG00000001583.14	Tnk1	chr11	protein_coding	tyrosine kinase, non-receptor, 1
chr11	69774626	69775148	-	69774582	69775148	A3SS	0.5	50	50	ENSMUST00000108622.8	ENSMUSG00000001588.13	Acap1	chr11	protein_coding	ArfGAP with coiled-coil, ankyrin repeat and PH domains 1
chr11	69788318;69788462	69788398;69789078	-	69788318;69788976	69788929;69789078	MXE	0.5	100	100	ENSMUST00000100969.9	ENSMUSG00000018570.18	2810408A11Rik	chr11	protein_coding	RIKEN cDNA 2810408A11 gene
chr11	69788318;69788462	69788437;69789078	-	69788318;69788976	69788929;69789078	MXE	0.5	100	100	ENSMUST00000100969.9	ENSMUSG00000018570.18	2810408A11Rik	chr11	protein_coding	RIKEN cDNA 2810408A11 gene
chr11	69788318;69788462	69788445;69789078	-	69788318;69788976	69788929;69789078	MXE	0.5	100	100	ENSMUST00000100969.9	ENSMUSG00000018570.18	2810408A11Rik	chr11	protein_coding	RIKEN cDNA 2810408A11 gene
chr11	69788318;69788580	69788398;69788929	-	69788318	69788929	cassetteExon	0.5	100	100	ENSMUST00000100969.9	ENSMUSG00000018570.18	2810408A11Rik	chr11	protein_coding	RIKEN cDNA 2810408A11 gene
chr11	69788318;69788580	69788437;69788929	-	69788318	69788929	cassetteExon	0.5	100	100	ENSMUST00000100969.9	ENSMUSG00000018570.18	2810408A11Rik	chr11	protein_coding	RIKEN cDNA 2810408A11 gene
chr11	69788318;69788580	69788445;69788929	-	69788318	69788929	cassetteExon	0.5	100	100	ENSMUST00000100969.9	ENSMUSG00000018570.18	2810408A11Rik	chr11	protein_coding	RIKEN cDNA 2810408A11 gene
chr11	69790113	69790343	-	69790082	69790343	A3SS	0.5	50	50	ENSMUST00000100969.9	ENSMUSG00000018570.18	2810408A11Rik	chr11	protein_coding	RIKEN cDNA 2810408A11 gene
chr11	69790752	69791129	-	69790636	69791129	A3SS	0.5	50	50	ENSMUST00000100969.9	ENSMUSG00000018570.18	2810408A11Rik	chr11	protein_coding	RIKEN cDNA 2810408A11 gene
chr11	69789918	69790025	-	69789918	69790009	A5SS	0.5	50	50	ENSMUST00000100969.9	ENSMUSG00000018570.18	2810408A11Rik	chr11	protein_coding	RIKEN cDNA 2810408A11 gene
chr11	69790636	69791615	-	69790636	69791129	A5SS	0.5	50	50	ENSMUST00000100969.9	ENSMUSG00000018570.18	2810408A11Rik	chr11	protein_coding	RIKEN cDNA 2810408A11 gene
chr11	69788318	69788437	-	69788318	69788398	A5SS	0.25	50	50	ENSMUST00000108621.9	ENSMUSG00000018570.18	2810408A11Rik	chr11	protein_coding	RIKEN cDNA 2810408A11 gene
chr11	69788318	69788445	-	69788318	69788398	A5SS	0.25	50	50	ENSMUST00000108621.9	ENSMUSG00000018570.18	2810408A11Rik	chr11	protein_coding	RIKEN cDNA 2810408A11 gene
chr11	69788462	69789078	-	69788976	69789078	A3SS&ES	0.5	50	50	ENSMUST00000102580.10	ENSMUSG00000018570.18	2810408A11Rik	chr11	protein_coding	RIKEN cDNA 2810408A11 gene
chr11	69788318	69788437	-	69788318	69788445	A5SS	0.25	50	50	ENSMUST00000102580.10	ENSMUSG00000018570.18	2810408A11Rik	chr11	protein_coding	RIKEN cDNA 2810408A11 gene
chr11	69788318	69788929	-	69788318	69788445	A5SS	0.25	50	50	ENSMUST00000144431.8	ENSMUSG00000018570.18	2810408A11Rik	chr11	protein_coding	RIKEN cDNA 2810408A11 gene
chr11	69788318	69788929	-	69788318	69788437	A5SS	0.25	50	50	ENSMUST00000129234.8	ENSMUSG00000018570.18	2810408A11Rik	chr11	protein_coding	RIKEN cDNA 2810408A11 gene
chr11	69793011	69793834	+	69791974	69793834	A5SS	0.5	50	50	ENSMUST00000176614.2	ENSMUSG00000047284.15	Neurl4	chr11	protein_coding	neuralized E3 ubiquitin protein ligase 4
chr11	69794278;69794545	69794480;69794691	+	69794278	69794691	cassetteExon	0.5	100	100	ENSMUST00000177138.8	ENSMUSG00000047284.15	Neurl4	chr11	protein_coding	neuralized E3 ubiquitin protein ligase 4
chr11	69794278;69794545	69794503;69794691	+	69794278	69794691	cassetteExon	0.5	100	100	ENSMUST00000177138.8	ENSMUSG00000047284.15	Neurl4	chr11	protein_coding	neuralized E3 ubiquitin protein ligase 4
chr11	69802920;69803379	69803341;69803953	+	69802920	69803953	cassetteExon	0.5	100	100	ENSMUST00000177138.8	ENSMUSG00000047284.15	Neurl4	chr11	protein_coding	neuralized E3 ubiquitin protein ligase 4
chr11	69797429	69797556	+	69797429	69797552	A3SS	0.5	50	50	ENSMUST00000177138.8	ENSMUSG00000047284.15	Neurl4	chr11	protein_coding	neuralized E3 ubiquitin protein ligase 4
chr11	69801245	69801544	+	69801245	69801561	A3SS	0.5	50	50	ENSMUST00000177138.8	ENSMUSG00000047284.15	Neurl4	chr11	protein_coding	neuralized E3 ubiquitin protein ligase 4
chr11	69797121	69797344	+	69797233	69797344	A5SS	0.5	50	50	ENSMUST00000177138.8	ENSMUSG00000047284.15	Neurl4	chr11	protein_coding	neuralized E3 ubiquitin protein ligase 4
chr11	69798838	69798922	+	69798832	69798922	A5SS	0.5	50	50	ENSMUST00000177138.8	ENSMUSG00000047284.15	Neurl4	chr11	protein_coding	neuralized E3 ubiquitin protein ligase 4
chr11	69794278	69794503	+	69794278	69794480	A3SS	0.33	50	50	ENSMUST00000177476.8	ENSMUSG00000047284.15	Neurl4	chr11	protein_coding	neuralized E3 ubiquitin protein ligase 4
chr11	69794545	69794790	+	69794545	69794691	A3SS	0.5	50	50	ENSMUST00000177476.8	ENSMUSG00000047284.15	Neurl4	chr11	protein_coding	neuralized E3 ubiquitin protein ligase 4
chr11	69794278	69794691	+	69794545	69794691	A5SS	0.5	50	50	ENSMUST00000177160.2	ENSMUSG00000047284.15	Neurl4	chr11	protein_coding	neuralized E3 ubiquitin protein ligase 4
chr11	69794278	69794691	+	69794278	69794480	A3SS&ES	0.33	50	50	ENSMUST00000133203.9	ENSMUSG00000047284.15	Neurl4	chr11	protein_coding	neuralized E3 ubiquitin protein ligase 4
chr11	69804896	69805099	+	69804900	69805099	A5SS	0.5	50	50	ENSMUST00000072581.9	ENSMUSG00000023170.15	Gps2	chr11	protein_coding	G protein pathway suppressor 2
chr11	69810162	69811850	-	69810162;69811260	69811167;69811850	ES	0.5	50	50	ENSMUST00000164359.8	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69811260	69811989	-	69811260	69811850	5pMXE	0.33	50	50	ENSMUST00000164359.8	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69810162	69810275	-	69810162	69811167	A5SS	0.2	50	50	ENSMUST00000164359.8	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69810162	69811627	-	69810162	69811167	A5SS&ES	0.2	50	50	ENSMUST00000164359.8	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69810162	69811868	-	69810162	69811167	A5SS&ES	0.2	50	50	ENSMUST00000164359.8	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69811260	69811627	-	69811260	69811850	A5SS	0.33	50	50	ENSMUST00000164359.8	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69810162	69811850	-	69810162	69811167	5pMXE	0.16	50	50	ENSMUST00000108610.8	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69810162	69811989	-	69810162	69811167	5pMXE	0.16	50	50	ENSMUST00000108610.8	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69810162	69811850	-	69810162	69811627	5pMXE	0.16	50	50	ENSMUST00000108612.8	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69810162	69811868	-	69810162	69811627	5pMXE	0.16	50	50	ENSMUST00000108612.8	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69810162	69811989	-	69810162	69811627	5pMXE	0.16	50	50	ENSMUST00000108612.8	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69810162;69811248	69811167;69811627	-	69810162	69811627	cassetteExon	0.5	100	100	ENSMUST00000108612.8	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69810162;69811260	69811167;69811627	-	69810162	69811627	cassetteExon	0.5	100	100	ENSMUST00000108612.8	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69810162	69810275	-	69810162	69811627	A5SS	0.16	50	50	ENSMUST00000108612.8	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69811260	69811989	-	69811260	69811627	5pMXE	0.33	50	50	ENSMUST00000108611.8	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69811248	69811627	-	69811260	69811627	A3SS	0.33	50	50	ENSMUST00000108611.8	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69810162;69810304	69810275;69811989	-	69810162	69811989	cassetteExon	0.5	100	100	ENSMUST00000108613.10	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69810162;69811248	69811167;69811989	-	69810162	69811989	cassetteExon	0.5	100	100	ENSMUST00000108613.10	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69810162;69811260	69811167;69811989	-	69810162	69811989	cassetteExon	0.5	100	100	ENSMUST00000108613.10	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69810162	69811850	-	69810162	69811989	A5SS	0.16	50	50	ENSMUST00000108613.10	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69810162	69811868	-	69810162	69811989	A5SS	0.16	50	50	ENSMUST00000108613.10	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69810162;69810304	69810275;69811989	-	69810162;69811260	69811167;69811989	MXE	0.5	100	100	ENSMUST00000043419.10	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69811248	69811989	-	69811260	69811989	A3SS	0.25	50	50	ENSMUST00000043419.10	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69810304	69812648	-	69810304	69811989	5pMXE	0.5	50	50	ENSMUST00000070996.11	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69810162;69811248	69811167;69811989	-	69810162;69810304	69810275;69811989	MXE	0.5	100	100	ENSMUST00000070996.11	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69810162	69811850	-	69810162	69810275	A5SS&ES	0.16	50	50	ENSMUST00000070996.11	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69810162	69811868	-	69810162	69810275	A5SS&ES	0.16	50	50	ENSMUST00000070996.11	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69810162	69811989	-	69810162	69810275	A5SS&ES	0.16	50	50	ENSMUST00000071026.10	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69810162	69811868	-	69810162	69811850	A5SS	0.16	50	50	ENSMUST00000108609.8	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69811248	69811627	-	69811248	69811989	A5SS	0.5	50	50	ENSMUST00000108607.8	ENSMUSG00000078812.11	Eif5a	chr11	protein_coding	eukaryotic translation initiation factor 5A
chr11	69826783	69827723	+	69827074	69827723	A5SS	0.33	50	50	ENSMUST00000018698.12	ENSMUSG00000018554.14	Ybx2	chr11	protein_coding	Y box protein 2
chr11	69827291	69827723	+	69827074	69827723	A5SS	0.33	50	50	ENSMUST00000018698.12	ENSMUSG00000018554.14	Ybx2	chr11	protein_coding	Y box protein 2
chr11	69827291	69827723	+	69826783	69827723	A5SS	0.33	50	50	ENSMUST00000149194.8	ENSMUSG00000018554.14	Ybx2	chr11	protein_coding	Y box protein 2
chr11	69837019	69837394	-	69837019;69837284	69837112;69837394	ES	0.33	50	50	ENSMUST00000178809.8	ENSMUSG00000018566.15	Slc2a4	chr11	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 4
chr11	69836779	69837394	-	69837284	69837394	A3SS&ES	0.33	50	50	ENSMUST00000178809.8	ENSMUSG00000018566.15	Slc2a4	chr11	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 4
chr11	69837510	69838770	-	69837510	69838775	A5SS	0.5	50	50	ENSMUST00000178809.8	ENSMUSG00000018566.15	Slc2a4	chr11	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 4
chr11	69836779	69837394	-	69836779;69837019	69836895;69837394	ES	0.33	50	50	ENSMUST00000152487.8	ENSMUSG00000018566.15	Slc2a4	chr11	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 4
chr11	69836779;69837284	69836895;69837394	-	69836779	69837394	cassetteExon	0.5	100	100	ENSMUST00000178363.8	ENSMUSG00000018566.15	Slc2a4	chr11	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 4
chr11	69855746	69857769	+	69855746;69856975	69856711;69857769	ES	0.5	50	50	ENSMUST00000108597.8	ENSMUSG00000018569.13	Cldn7	chr11	protein_coding	claudin 7
chr11	69856192	69856711	+	69855746	69856711	A5SS	0.5	50	50	ENSMUST00000108597.8	ENSMUSG00000018569.13	Cldn7	chr11	protein_coding	claudin 7
chr11	69855746	69857769	+	69856975	69857769	A5SS&ES	0.5	50	50	ENSMUST00000060651.6	ENSMUSG00000018569.13	Cldn7	chr11	protein_coding	claudin 7
chr11	69861568;69866086	69865866;69870656	-	69861568	69870656	cassetteExon	0.5	100	100	ENSMUST00000142788.8	ENSMUSG00000018565.18	Elp5	chr11	protein_coding	elongator acetyltransferase complex subunit 5
chr11	69860022	69860161	-	69860022	69860319	A5SS	0.5	50	50	ENSMUST00000142788.8	ENSMUSG00000018565.18	Elp5	chr11	protein_coding	elongator acetyltransferase complex subunit 5
chr11	69871388	69872388	-	69871388	69872033	5pMXE	0.5	50	50	ENSMUST00000108594.8	ENSMUSG00000018565.18	Elp5	chr11	protein_coding	elongator acetyltransferase complex subunit 5
chr11	69871156	69872388	-	69871388	69872388	A3SS	0.5	50	50	ENSMUST00000108595.9	ENSMUSG00000018565.18	Elp5	chr11	protein_coding	elongator acetyltransferase complex subunit 5
chr11	69861568	69870656	-	69866086	69870656	3pMXE	0.5	50	50	ENSMUST00000147437.3	ENSMUSG00000018565.18	Elp5	chr11	protein_coding	elongator acetyltransferase complex subunit 5
chr11	69874594	69875080	+	69872411	69875080	A5SS	0.5	50	50	ENSMUST00000108593.8	ENSMUSG00000018559.17	Ctdnep1	chr11	protein_coding	CTD nuclear envelope phosphatase 1
chr11	69880025	69880308	+	69879765	69880308	A5SS	0.5	50	50	ENSMUST00000108593.8	ENSMUSG00000018559.17	Ctdnep1	chr11	protein_coding	CTD nuclear envelope phosphatase 1
chr11	69883269	69883502	+	69883269	69883408	A3SS	0.5	50	50	ENSMUST00000018711.15	ENSMUSG00000018567.15	Gabarap	chr11	protein_coding	gamma-aminobutyric acid receptor associated protein
chr11	69882987	69883191	+	69882628	69883191	A5SS	0.5	50	50	ENSMUST00000018711.15	ENSMUSG00000018567.15	Gabarap	chr11	protein_coding	gamma-aminobutyric acid receptor associated protein
chr11	69888664	69889328	+	69888664	69889127	A3SS	0.5	50	50	ENSMUST00000018716.10	ENSMUSG00000018572.11	Phf23	chr11	protein_coding	PHD finger protein 23
chr11	69887335	69888423	+	69886879	69888423	A5SS	0.16	50	50	ENSMUST00000018716.10	ENSMUSG00000018572.11	Phf23	chr11	protein_coding	PHD finger protein 23
chr11	69887632	69888423	+	69886879	69888423	A5SS	0.16	50	50	ENSMUST00000018716.10	ENSMUSG00000018572.11	Phf23	chr11	protein_coding	PHD finger protein 23
chr11	69887862	69888423	+	69886879	69888423	A5SS	0.16	50	50	ENSMUST00000018716.10	ENSMUSG00000018572.11	Phf23	chr11	protein_coding	PHD finger protein 23
chr11	69887877	69888423	+	69886879	69888423	A5SS	0.16	50	50	ENSMUST00000018716.10	ENSMUSG00000018572.11	Phf23	chr11	protein_coding	PHD finger protein 23
chr11	69887885	69888423	+	69886879	69888423	A5SS	0.16	50	50	ENSMUST00000018716.10	ENSMUSG00000018572.11	Phf23	chr11	protein_coding	PHD finger protein 23
chr11	69887632	69888423	+	69887335	69888423	A5SS	0.16	50	50	ENSMUST00000133485.8	ENSMUSG00000018572.11	Phf23	chr11	protein_coding	PHD finger protein 23
chr11	69887862	69888423	+	69887335	69888423	A5SS	0.16	50	50	ENSMUST00000133485.8	ENSMUSG00000018572.11	Phf23	chr11	protein_coding	PHD finger protein 23
chr11	69887877	69888423	+	69887335	69888423	A5SS	0.16	50	50	ENSMUST00000133485.8	ENSMUSG00000018572.11	Phf23	chr11	protein_coding	PHD finger protein 23
chr11	69887885	69888423	+	69887335	69888423	A5SS	0.16	50	50	ENSMUST00000133485.8	ENSMUSG00000018572.11	Phf23	chr11	protein_coding	PHD finger protein 23
chr11	69887862	69888423	+	69887632	69888423	A5SS	0.16	50	50	ENSMUST00000138186.2	ENSMUSG00000018572.11	Phf23	chr11	protein_coding	PHD finger protein 23
chr11	69887877	69888423	+	69887632	69888423	A5SS	0.16	50	50	ENSMUST00000138186.2	ENSMUSG00000018572.11	Phf23	chr11	protein_coding	PHD finger protein 23
chr11	69887885	69888423	+	69887632	69888423	A5SS	0.16	50	50	ENSMUST00000138186.2	ENSMUSG00000018572.11	Phf23	chr11	protein_coding	PHD finger protein 23
chr11	69887877	69888423	+	69887862	69888423	A5SS	0.16	50	50	ENSMUST00000123817.8	ENSMUSG00000018572.11	Phf23	chr11	protein_coding	PHD finger protein 23
chr11	69887885	69888423	+	69887862	69888423	A5SS	0.16	50	50	ENSMUST00000123817.8	ENSMUSG00000018572.11	Phf23	chr11	protein_coding	PHD finger protein 23
chr11	69887885	69888423	+	69887877	69888423	A5SS	0.16	50	50	ENSMUST00000146789.8	ENSMUSG00000018572.11	Phf23	chr11	protein_coding	PHD finger protein 23
chr11	69905529	69905943	-	69905529;69905684	69905619;69905943	ES	0.5	50	50	ENSMUST00000102574.10	ENSMUSG00000018574.15	Acadvl	chr11	protein_coding	acyl-Coenzyme A dehydrogenase, very long chain
chr11	69933569	69935102	+	69933569;69934593	69934484;69935102	ES	0.5	50	50	ENSMUST00000231506.2	ENSMUSG00000020886.18	Dlg4	chr11	protein_coding	discs large MAGUK scaffold protein 4
chr11	69921278	69921421	+	69921278	69921430	A3SS	0.5	50	50	ENSMUST00000231506.2	ENSMUSG00000020886.18	Dlg4	chr11	protein_coding	discs large MAGUK scaffold protein 4
chr11	69908202	69908612	+	69908346	69908612	A5SS&ES	0.5	50	50	ENSMUST00000231506.2	ENSMUSG00000020886.18	Dlg4	chr11	protein_coding	discs large MAGUK scaffold protein 4
chr11	69909775	69917749	+	69908652	69917749	A5SS	0.33	50	50	ENSMUST00000231506.2	ENSMUSG00000020886.18	Dlg4	chr11	protein_coding	discs large MAGUK scaffold protein 4
chr11	69909775	69921225	+	69917814	69921225	A5SS&ES	0.16	50	50	ENSMUST00000231506.2	ENSMUSG00000020886.18	Dlg4	chr11	protein_coding	discs large MAGUK scaffold protein 4
chr11	69914937	69917749	+	69908652	69917749	A5SS	0.33	50	50	ENSMUST00000231506.2	ENSMUSG00000020886.18	Dlg4	chr11	protein_coding	discs large MAGUK scaffold protein 4
chr11	69917913	69921225	+	69917814	69921225	A5SS	0.16	50	50	ENSMUST00000231506.2	ENSMUSG00000020886.18	Dlg4	chr11	protein_coding	discs large MAGUK scaffold protein 4
chr11	69918984	69921225	+	69917814	69921225	A5SS	0.16	50	50	ENSMUST00000231506.2	ENSMUSG00000020886.18	Dlg4	chr11	protein_coding	discs large MAGUK scaffold protein 4
chr11	69920534	69921225	+	69917814	69921225	A5SS	0.16	50	50	ENSMUST00000231506.2	ENSMUSG00000020886.18	Dlg4	chr11	protein_coding	discs large MAGUK scaffold protein 4
chr11	69920701	69921225	+	69917814	69921225	A5SS	0.16	50	50	ENSMUST00000231506.2	ENSMUSG00000020886.18	Dlg4	chr11	protein_coding	discs large MAGUK scaffold protein 4
chr11	69909775	69921225	+	69917913	69921225	A5SS&ES	0.16	50	50	ENSMUST00000108586.5	ENSMUSG00000020886.18	Dlg4	chr11	protein_coding	discs large MAGUK scaffold protein 4
chr11	69918984	69921225	+	69917913	69921225	A5SS	0.16	50	50	ENSMUST00000108586.5	ENSMUSG00000020886.18	Dlg4	chr11	protein_coding	discs large MAGUK scaffold protein 4
chr11	69920534	69921225	+	69917913	69921225	A5SS	0.16	50	50	ENSMUST00000108586.5	ENSMUSG00000020886.18	Dlg4	chr11	protein_coding	discs large MAGUK scaffold protein 4
chr11	69920701	69921225	+	69917913	69921225	A5SS	0.16	50	50	ENSMUST00000108586.5	ENSMUSG00000020886.18	Dlg4	chr11	protein_coding	discs large MAGUK scaffold protein 4
chr11	69909775	69921225	+	69909775;69917814	69917749;69921225	ES	0.16	50	50	ENSMUST00000231415.2	ENSMUSG00000020886.18	Dlg4	chr11	protein_coding	discs large MAGUK scaffold protein 4
chr11	69914937	69917749	+	69909775	69917749	A5SS	0.33	50	50	ENSMUST00000231415.2	ENSMUSG00000020886.18	Dlg4	chr11	protein_coding	discs large MAGUK scaffold protein 4
chr11	69909775;69917913	69917749;69921225	+	69909775	69921225	cassetteExon	0.5	100	100	ENSMUST00000232002.2	ENSMUSG00000020886.18	Dlg4	chr11	protein_coding	discs large MAGUK scaffold protein 4
chr11	69918984	69921225	+	69909775	69921225	A5SS	0.16	50	50	ENSMUST00000232002.2	ENSMUSG00000020886.18	Dlg4	chr11	protein_coding	discs large MAGUK scaffold protein 4
chr11	69920534	69921225	+	69909775	69921225	A5SS	0.16	50	50	ENSMUST00000232002.2	ENSMUSG00000020886.18	Dlg4	chr11	protein_coding	discs large MAGUK scaffold protein 4
chr11	69920701	69921225	+	69909775	69921225	A5SS	0.16	50	50	ENSMUST00000232002.2	ENSMUSG00000020886.18	Dlg4	chr11	protein_coding	discs large MAGUK scaffold protein 4
chr11	69920534	69921225	+	69918984	69921225	A5SS	0.16	50	50	ENSMUST00000231452.2	ENSMUSG00000020886.18	Dlg4	chr11	protein_coding	discs large MAGUK scaffold protein 4
chr11	69920701	69921225	+	69918984	69921225	A5SS	0.16	50	50	ENSMUST00000231452.2	ENSMUSG00000020886.18	Dlg4	chr11	protein_coding	discs large MAGUK scaffold protein 4
chr11	69920701	69921225	+	69920534	69921225	A5SS	0.16	50	50	ENSMUST00000231628.2	ENSMUSG00000020886.18	Dlg4	chr11	protein_coding	discs large MAGUK scaffold protein 4
chr11	69947311	69947858	+	69947311;69947770	69947684;69947858	ES	0.5	50	50	ENSMUST00000146411.9	ENSMUSG00000020884.16	Asgr1	chr11	protein_coding	asialoglycoprotein receptor 1
chr11	69945314	69945707	+	69944973	69945707	A5SS	0.5	50	50	ENSMUST00000146411.9	ENSMUSG00000020884.16	Asgr1	chr11	protein_coding	asialoglycoprotein receptor 1
chr11	69946792	69947063	+	69946939	69947063	A5SS&ES	0.5	50	50	ENSMUST00000146411.9	ENSMUSG00000020884.16	Asgr1	chr11	protein_coding	asialoglycoprotein receptor 1
chr11	69983616	69983809	+	69983616	69983882	A3SS	0.33	50	50	ENSMUST00000102572.8	ENSMUSG00000040963.16	Asgr2	chr11	protein_coding	asialoglycoprotein receptor 2
chr11	69983616	69987633	+	69983616	69983882	A3SS&ES	0.33	50	50	ENSMUST00000102572.8	ENSMUSG00000040963.16	Asgr2	chr11	protein_coding	asialoglycoprotein receptor 2
chr11	69983616	69983809	+	69983616	69987633	A3SS	0.33	50	50	ENSMUST00000143772.8	ENSMUSG00000040963.16	Asgr2	chr11	protein_coding	asialoglycoprotein receptor 2
chr11	70025089	70025875	+	70025089	70025878	A3SS	0.5	50	50	ENSMUST00000041550.12	ENSMUSG00000040950.14	Mgl2	chr11	protein_coding	macrophage galactose N-acetyl-galactosamine specific lectin 2
chr11	70026818	70026904	+	70026818	70027077	A3SS	0.5	50	50	ENSMUST00000041550.12	ENSMUSG00000040950.14	Mgl2	chr11	protein_coding	macrophage galactose N-acetyl-galactosamine specific lectin 2
chr11	70021267	70024945	+	70021268	70024945	A5SS	0.5	50	50	ENSMUST00000041550.12	ENSMUSG00000040950.14	Mgl2	chr11	protein_coding	macrophage galactose N-acetyl-galactosamine specific lectin 2
chr11	70025047	70025878	+	70025089	70025878	A5SS	0.5	50	50	ENSMUST00000041550.12	ENSMUSG00000040950.14	Mgl2	chr11	protein_coding	macrophage galactose N-acetyl-galactosamine specific lectin 2
chr11	70060903	70061244	+	70060903	70060986	3pMXE	0.5	50	50	ENSMUST00000144935.9	ENSMUSG00000000318.17	Clec10a	chr11	protein_coding	C-type lectin domain family 10, member A
chr11	70058830;70059522	70059409;70059955	+	70058830	70059955	cassetteExon	0.5	100	100	ENSMUST00000144935.9	ENSMUSG00000000318.17	Clec10a	chr11	protein_coding	C-type lectin domain family 10, member A
chr11	70058830;70059522	70059412;70059955	+	70058830	70059955	cassetteExon	0.5	100	100	ENSMUST00000144935.9	ENSMUSG00000000318.17	Clec10a	chr11	protein_coding	C-type lectin domain family 10, member A
chr11	70060205	70060389	+	70060205	70060285	A3SS&ES	0.5	50	50	ENSMUST00000144935.9	ENSMUSG00000000318.17	Clec10a	chr11	protein_coding	C-type lectin domain family 10, member A
chr11	70057642	70058691	+	70047088	70058691	A5SS	0.5	50	50	ENSMUST00000144935.9	ENSMUSG00000000318.17	Clec10a	chr11	protein_coding	C-type lectin domain family 10, member A
chr11	70060903	70061244	+	70060903;70061092	70060986;70061244	ES	0.5	50	50	ENSMUST00000102571.10	ENSMUSG00000000318.17	Clec10a	chr11	protein_coding	C-type lectin domain family 10, member A
chr11	70057642	70058691	+	70057642	70058643	A3SS	0.5	50	50	ENSMUST00000102571.10	ENSMUSG00000000318.17	Clec10a	chr11	protein_coding	C-type lectin domain family 10, member A
chr11	70058830	70059409	+	70058830	70059412	A3SS	0.33	50	50	ENSMUST00000102571.10	ENSMUSG00000000318.17	Clec10a	chr11	protein_coding	C-type lectin domain family 10, member A
chr11	70058830	70059955	+	70058830	70059412	3pMXE	0.33	50	50	ENSMUST00000178567.3	ENSMUSG00000000318.17	Clec10a	chr11	protein_coding	C-type lectin domain family 10, member A
chr11	70105538	70106110	+	70105538;70105924	70105781;70106110	ES	0.5	50	50	ENSMUST00000126388.8	ENSMUSG00000040938.17	Slc16a11	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 11
chr11	70105924	70106963	+	70105924;70106877	70106110;70106963	ES	0.5	50	50	ENSMUST00000126388.8	ENSMUSG00000040938.17	Slc16a11	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 11
chr11	70105090	70105328	+	70105090	70105192	A3SS	0.33	50	50	ENSMUST00000126388.8	ENSMUSG00000040938.17	Slc16a11	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 11
chr11	70105090	70105331	+	70105090	70105192	A3SS	0.33	50	50	ENSMUST00000126388.8	ENSMUSG00000040938.17	Slc16a11	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 11
chr11	70105501	70105781	+	70105538	70105781	A5SS	0.5	50	50	ENSMUST00000126388.8	ENSMUSG00000040938.17	Slc16a11	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 11
chr11	70105090	70105331	+	70105090	70105328	A3SS	0.33	50	50	ENSMUST00000171032.8	ENSMUSG00000040938.17	Slc16a11	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 11
chr11	70105501	70105887	+	70105501	70105781	A3SS	0.5	50	50	ENSMUST00000123716.2	ENSMUSG00000040938.17	Slc16a11	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 11
chr11	70105924	70106963	+	70105924	70106110	A3SS	0.5	50	50	ENSMUST00000123716.2	ENSMUSG00000040938.17	Slc16a11	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 11
chr11	70105538	70106110	+	70105924	70106110	A5SS&ES	0.5	50	50	ENSMUST00000123716.2	ENSMUSG00000040938.17	Slc16a11	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 11
chr11	70105090	70105331	+	70105085	70105331	A5SS	0.5	50	50	ENSMUST00000126296.8	ENSMUSG00000040938.17	Slc16a11	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 11
chr11	70105538;70105924	70105781;70106963	+	70105538;70106877	70106110;70106963	MXE	0.5	100	100	ENSMUST00000136328.2	ENSMUSG00000040938.17	Slc16a11	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 11
chr11	70105538	70106110	+	70105538	70105781	3pMXE	0.5	50	50	ENSMUST00000153993.3	ENSMUSG00000040938.17	Slc16a11	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 11
chr11	70106877	70106963	+	70105924	70106963	A5SS	0.5	50	50	ENSMUST00000149880.2	ENSMUSG00000040938.17	Slc16a11	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 11
chr11	70110156	70111305	-	70110156;70111164	70111021;70111305	ES	0.33	50	50	ENSMUST00000060010.3	ENSMUSG00000044367.8	Slc16a13	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 13
chr11	70109593	70111305	-	70111164	70111305	A3SS&ES	0.33	50	50	ENSMUST00000060010.3	ENSMUSG00000044367.8	Slc16a13	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 13
chr11	70110156	70111591	-	70110156	70111021	A5SS&ES	0.33	50	50	ENSMUST00000060010.3	ENSMUSG00000044367.8	Slc16a13	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 13
chr11	70110156	70111305	-	70109593	70111305	A3SS	0.33	50	50	ENSMUST00000159867.2	ENSMUSG00000044367.8	Slc16a13	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 13
chr11	70110156	70111305	-	70110156	70111591	A5SS	0.33	50	50	ENSMUST00000190533.2	ENSMUSG00000044367.8	Slc16a13	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 13
chr11	70119997	70120481	-	70119997	70120536	A5SS	0.5	50	50	ENSMUST00000000326.12	ENSMUSG00000000317.12	Bcl6b	chr11	protein_coding	B cell CLL/lymphoma 6, member B
chr11	70126290	70126850	-	70126626	70126850	A3SS	0.25	50	50	ENSMUST00000135390.2	ENSMUSG00000020831.19	0610010K14Rik	chr11	protein_coding	RIKEN cDNA 0610010K14 gene
chr11	70126294	70126850	-	70126626	70126850	A3SS	0.25	50	50	ENSMUST00000135390.2	ENSMUSG00000020831.19	0610010K14Rik	chr11	protein_coding	RIKEN cDNA 0610010K14 gene
chr11	70126586	70126850	-	70126626	70126850	A3SS	0.25	50	50	ENSMUST00000135390.2	ENSMUSG00000020831.19	0610010K14Rik	chr11	protein_coding	RIKEN cDNA 0610010K14 gene
chr11	70126290	70126850	-	70126290;70126586	70126522;70126850	ES	0.25	50	50	ENSMUST00000134700.8	ENSMUSG00000020831.19	0610010K14Rik	chr11	protein_coding	RIKEN cDNA 0610010K14 gene
chr11	70127037	70128086	-	70127037	70127703	5pMXE	0.25	50	50	ENSMUST00000134700.8	ENSMUSG00000020831.19	0610010K14Rik	chr11	protein_coding	RIKEN cDNA 0610010K14 gene
chr11	70127037	70128357	-	70127037	70127703	5pMXE	0.25	50	50	ENSMUST00000134700.8	ENSMUSG00000020831.19	0610010K14Rik	chr11	protein_coding	RIKEN cDNA 0610010K14 gene
chr11	70126294	70126522	-	70126290	70126522	A3SS	0.5	50	50	ENSMUST00000134700.8	ENSMUSG00000020831.19	0610010K14Rik	chr11	protein_coding	RIKEN cDNA 0610010K14 gene
chr11	70126294	70126850	-	70126586	70126850	A3SS&ES	0.25	50	50	ENSMUST00000134700.8	ENSMUSG00000020831.19	0610010K14Rik	chr11	protein_coding	RIKEN cDNA 0610010K14 gene
chr11	70127037	70127714	-	70127037	70127703	A5SS	0.25	50	50	ENSMUST00000134700.8	ENSMUSG00000020831.19	0610010K14Rik	chr11	protein_coding	RIKEN cDNA 0610010K14 gene
chr11	70127037;70127804	70127703;70128357	-	70127037	70128357	cassetteExon	0.5	100	100	ENSMUST00000108575.9	ENSMUSG00000020831.19	0610010K14Rik	chr11	protein_coding	RIKEN cDNA 0610010K14 gene
chr11	70127037;70127804	70127714;70128357	-	70127037	70128357	cassetteExon	0.5	100	100	ENSMUST00000108575.9	ENSMUSG00000020831.19	0610010K14Rik	chr11	protein_coding	RIKEN cDNA 0610010K14 gene
chr11	70126294	70126522	-	70126294	70126823	A5SS	0.33	50	50	ENSMUST00000108575.9	ENSMUSG00000020831.19	0610010K14Rik	chr11	protein_coding	RIKEN cDNA 0610010K14 gene
chr11	70126294	70126850	-	70126294	70126823	A5SS	0.33	50	50	ENSMUST00000108575.9	ENSMUSG00000020831.19	0610010K14Rik	chr11	protein_coding	RIKEN cDNA 0610010K14 gene
chr11	70127037	70128086	-	70127037	70128357	A5SS	0.25	50	50	ENSMUST00000108575.9	ENSMUSG00000020831.19	0610010K14Rik	chr11	protein_coding	RIKEN cDNA 0610010K14 gene
chr11	70128451	70128538	-	70128451	70128610	A5SS	0.5	50	50	ENSMUST00000108575.9	ENSMUSG00000020831.19	0610010K14Rik	chr11	protein_coding	RIKEN cDNA 0610010K14 gene
chr11	70126294;70126586	70126522;70126850	-	70126294	70126850	cassetteExon	0.5	100	100	ENSMUST00000108579.8	ENSMUSG00000020831.19	0610010K14Rik	chr11	protein_coding	RIKEN cDNA 0610010K14 gene
chr11	70126294;70126626	70126522;70126850	-	70126294	70126850	cassetteExon	0.5	100	100	ENSMUST00000108579.8	ENSMUSG00000020831.19	0610010K14Rik	chr11	protein_coding	RIKEN cDNA 0610010K14 gene
chr11	70126290	70126850	-	70126294	70126850	A3SS	0.25	50	50	ENSMUST00000108579.8	ENSMUSG00000020831.19	0610010K14Rik	chr11	protein_coding	RIKEN cDNA 0610010K14 gene
chr11	70126290	70126850	-	70126290;70126626	70126522;70126850	ES	0.25	50	50	ENSMUST00000108578.9	ENSMUSG00000020831.19	0610010K14Rik	chr11	protein_coding	RIKEN cDNA 0610010K14 gene
chr11	70127037	70127714	-	70127037	70128086	A5SS	0.25	50	50	ENSMUST00000148878.9	ENSMUSG00000020831.19	0610010K14Rik	chr11	protein_coding	RIKEN cDNA 0610010K14 gene
chr11	70127037	70128357	-	70127804	70128357	3pMXE	0.5	50	50	ENSMUST00000150504.3	ENSMUSG00000020831.19	0610010K14Rik	chr11	protein_coding	RIKEN cDNA 0610010K14 gene
chr11	70129840	70130252	-	70129840	70130486	A5SS	0.33	50	50	ENSMUST00000176116.8	ENSMUSG00000040904.11	Gm21988	chr11	protein_coding	predicted gene 21988
chr11	70129840	70130482	-	70129840	70130486	A5SS	0.33	50	50	ENSMUST00000176116.8	ENSMUSG00000040904.11	Gm21988	chr11	protein_coding	predicted gene 21988
chr11	70129840	70130252	-	70129840	70130482	A5SS	0.33	50	50	ENSMUST00000176268.2	ENSMUSG00000040904.11	Gm21988	chr11	protein_coding	predicted gene 21988
chr11	70236022	70236356	-	70236022	70236478	A5SS	0.5	50	50	ENSMUST00000130000.2	ENSMUSG00000018924.7	Alox15	chr11	protein_coding	arachidonate 15-lipoxygenase
chr11	70293579	70296453	-	70292892	70296453	A3SS	0.5	50	50	ENSMUST00000019065.10	ENSMUSG00000018921.12	Pelp1	chr11	protein_coding	proline, glutamic acid and leucine rich protein 1
chr11	70323579	70326989	+	70323579	70326368	3pMXE	0.25	50	50	ENSMUST00000124112.2	ENSMUSG00000060216.16	Arrb2	chr11	protein_coding	arrestin, beta 2
chr11	70323579;70324343	70324256;70326368	+	70323579	70326368	cassetteExon	0.5	100	100	ENSMUST00000124112.2	ENSMUSG00000060216.16	Arrb2	chr11	protein_coding	arrestin, beta 2
chr11	70323579	70326342	+	70323579	70326368	A3SS	0.25	50	50	ENSMUST00000124112.2	ENSMUSG00000060216.16	Arrb2	chr11	protein_coding	arrestin, beta 2
chr11	70323579	70326989	+	70323579;70326398	70326368;70326989	ES	0.5	50	50	ENSMUST00000084954.13	ENSMUSG00000060216.16	Arrb2	chr11	protein_coding	arrestin, beta 2
chr11	70327049;70327201	70327157;70327387	+	70327049	70327387	cassetteExon	0.5	100	100	ENSMUST00000084954.13	ENSMUSG00000060216.16	Arrb2	chr11	protein_coding	arrestin, beta 2
chr11	70330567	70330677	+	70330567	70330644	A3SS	0.5	50	50	ENSMUST00000084954.13	ENSMUSG00000060216.16	Arrb2	chr11	protein_coding	arrestin, beta 2
chr11	70323579	70326342	+	70323579	70324256	A3SS&ES	0.25	50	50	ENSMUST00000124943.8	ENSMUSG00000060216.16	Arrb2	chr11	protein_coding	arrestin, beta 2
chr11	70323579;70326398	70326342;70326989	+	70323579	70326989	cassetteExon	0.5	100	100	ENSMUST00000150076.8	ENSMUSG00000060216.16	Arrb2	chr11	protein_coding	arrestin, beta 2
chr11	70323579	70324256	+	70323579	70326989	A3SS	0.25	50	50	ENSMUST00000150076.8	ENSMUSG00000060216.16	Arrb2	chr11	protein_coding	arrestin, beta 2
chr11	70327583	70327695	+	70327583	70328397	A3SS	0.5	50	50	ENSMUST00000138006.8	ENSMUSG00000060216.16	Arrb2	chr11	protein_coding	arrestin, beta 2
chr11	70328203	70328397	+	70327583	70328397	A5SS	0.5	50	50	ENSMUST00000138006.8	ENSMUSG00000060216.16	Arrb2	chr11	protein_coding	arrestin, beta 2
chr11	70342889	70343034	+	70342919	70343034	A5SS	0.5	50	50	ENSMUST00000151013.8	ENSMUSG00000018923.14	Med11	chr11	protein_coding	mediator complex subunit 11
chr11	70348971	70349571	-	70346888	70349571	A3SS	0.5	50	50	ENSMUST00000019064.9	ENSMUSG00000018920.12	Cxcl16	chr11	protein_coding	chemokine (C-X-C motif) ligand 16
chr11	70346888	70347767	-	70346888	70349571	A5SS	0.5	50	50	ENSMUST00000019064.9	ENSMUSG00000018920.12	Cxcl16	chr11	protein_coding	chemokine (C-X-C motif) ligand 16
chr11	70354822	70355182	+	70354822;70355091	70354975;70355182	ES	0.5	50	50	ENSMUST00000108563.9	ENSMUSG00000040829.15	Zmynd15	chr11	protein_coding	zinc finger, MYND-type containing 15
chr11	70350906	70351378	+	70350906	70351719	A3SS	0.33	50	50	ENSMUST00000108563.9	ENSMUSG00000040829.15	Zmynd15	chr11	protein_coding	zinc finger, MYND-type containing 15
chr11	70350906	70351468	+	70350906	70351719	A3SS	0.33	50	50	ENSMUST00000108563.9	ENSMUSG00000040829.15	Zmynd15	chr11	protein_coding	zinc finger, MYND-type containing 15
chr11	70351966	70352610	+	70351966	70352613	A3SS	0.5	50	50	ENSMUST00000108563.9	ENSMUSG00000040829.15	Zmynd15	chr11	protein_coding	zinc finger, MYND-type containing 15
chr11	70352379	70352613	+	70351966	70352613	A5SS	0.5	50	50	ENSMUST00000108563.9	ENSMUSG00000040829.15	Zmynd15	chr11	protein_coding	zinc finger, MYND-type containing 15
chr11	70350906	70351468	+	70350906	70351378	A3SS	0.33	50	50	ENSMUST00000039093.10	ENSMUSG00000040829.15	Zmynd15	chr11	protein_coding	zinc finger, MYND-type containing 15
chr11	70351148	70351378	+	70350906	70351378	A5SS	0.5	50	50	ENSMUST00000039093.10	ENSMUSG00000040829.15	Zmynd15	chr11	protein_coding	zinc finger, MYND-type containing 15
chr11	70400911	70401041	+	70400700	70401041	A5SS	0.5	50	50	ENSMUST00000019063.3	ENSMUSG00000018919.11	Tm4sf5	chr11	protein_coding	transmembrane 4 superfamily member 5
chr11	70431440	70431671	+	70431034	70431671	A5SS	0.5	50	50	ENSMUST00000157075.8	ENSMUSG00000020828.14	Pld2	chr11	protein_coding	phospholipase D2
chr11	70445990	70446125	+	70445990	70446158	A3SS	0.33	50	50	ENSMUST00000018429.12	ENSMUSG00000020828.14	Pld2	chr11	protein_coding	phospholipase D2
chr11	70445990;70446556	70446125;70446734	+	70445990	70446734	cassetteExon	0.5	100	100	ENSMUST00000179806.2	ENSMUSG00000020828.14	Pld2	chr11	protein_coding	phospholipase D2
chr11	70445990;70446556	70446158;70446734	+	70445990	70446734	cassetteExon	0.5	100	100	ENSMUST00000179806.2	ENSMUSG00000020828.14	Pld2	chr11	protein_coding	phospholipase D2
chr11	70445990	70446734	+	70446556	70446734	5pMXE	0.5	50	50	ENSMUST00000130678.2	ENSMUSG00000020828.14	Pld2	chr11	protein_coding	phospholipase D2
chr11	70499252	70499666	+	70499252;70499525	70499415;70499666	ES	0.5	50	50	ENSMUST00000072237.13	ENSMUSG00000020827.19	Mink1	chr11	protein_coding	misshapen-like kinase 1 (zebrafish)
chr11	70500080	70500380	+	70500080;70500257	70500234;70500380	ES	0.5	50	50	ENSMUST00000072237.13	ENSMUSG00000020827.19	Mink1	chr11	protein_coding	misshapen-like kinase 1 (zebrafish)
chr11	70496990;70497543	70497457;70497746	+	70496990	70497746	cassetteExon	0.5	100	100	ENSMUST00000072237.13	ENSMUSG00000020827.19	Mink1	chr11	protein_coding	misshapen-like kinase 1 (zebrafish)
chr11	70494374	70494697	+	70494374	70494594	A3SS	0.5	50	50	ENSMUST00000072237.13	ENSMUSG00000020827.19	Mink1	chr11	protein_coding	misshapen-like kinase 1 (zebrafish)
chr11	70496031	70496776	+	70496031	70496874	A3SS	0.5	50	50	ENSMUST00000072237.13	ENSMUSG00000020827.19	Mink1	chr11	protein_coding	misshapen-like kinase 1 (zebrafish)
chr11	70500543	70500904	+	70500543	70500907	A3SS	0.5	50	50	ENSMUST00000072237.13	ENSMUSG00000020827.19	Mink1	chr11	protein_coding	misshapen-like kinase 1 (zebrafish)
chr11	70494760	70495010	+	70494769	70495010	A5SS	0.5	50	50	ENSMUST00000072237.13	ENSMUSG00000020827.19	Mink1	chr11	protein_coding	misshapen-like kinase 1 (zebrafish)
chr11	70505954	70506226	-	70505954;70506140	70506034;70506226	ES	0.33	50	50	ENSMUST00000102556.10	ENSMUSG00000014609.17	Chrne	chr11	protein_coding	cholinergic receptor, nicotinic, epsilon polypeptide
chr11	70506143	70506226	-	70506140	70506226	A3SS	0.33	50	50	ENSMUST00000102556.10	ENSMUSG00000014609.17	Chrne	chr11	protein_coding	cholinergic receptor, nicotinic, epsilon polypeptide
chr11	70505954	70506226	-	70505954;70506143	70506034;70506226	ES	0.33	50	50	ENSMUST00000014753.9	ENSMUSG00000014609.17	Chrne	chr11	protein_coding	cholinergic receptor, nicotinic, epsilon polypeptide
chr11	70507130	70507205	+	70507130	70507224	A3SS	0.5	50	50	ENSMUST00000180052.8	ENSMUSG00000087279.11	4930544D05Rik	chr11	protein_coding	RIKEN cDNA 4930544D05 gene
chr11	70507390	70507584	+	70507502	70507584	A5SS	0.33	50	50	ENSMUST00000180052.8	ENSMUSG00000087279.11	4930544D05Rik	chr11	protein_coding	RIKEN cDNA 4930544D05 gene
chr11	70507431	70507584	+	70507502	70507584	A5SS	0.33	50	50	ENSMUST00000180052.8	ENSMUSG00000087279.11	4930544D05Rik	chr11	protein_coding	RIKEN cDNA 4930544D05 gene
chr11	70507431	70507584	+	70507390	70507584	A5SS	0.33	50	50	ENSMUST00000135865.9	ENSMUSG00000087279.11	4930544D05Rik	chr11	protein_coding	RIKEN cDNA 4930544D05 gene
chr11	70530032	70530230	+	70530024	70530230	A5SS	0.5	50	50	ENSMUST00000055184.7	ENSMUSG00000050675.8	Gp1ba	chr11	protein_coding	glycoprotein 1b, alpha polypeptide
chr11	70537054	70538117	-	70537054	70537594	5pMXE	0.5	50	50	ENSMUST00000014750.15	ENSMUSG00000014606.15	Slc25a11	chr11	protein_coding	solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11
chr11	70537109	70537594	-	70537054	70537594	A3SS	0.5	50	50	ENSMUST00000014750.15	ENSMUSG00000014606.15	Slc25a11	chr11	protein_coding	solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11
chr11	70538778	70538855	+	70538778	70538841	A3SS	0.5	50	50	ENSMUST00000141537.2	ENSMUSG00000040746.16	Rnf167	chr11	protein_coding	ring finger protein 167
chr11	70538935	70540047	+	70538935;70539418	70539234;70540047	ES	0.5	50	50	ENSMUST00000141695.8	ENSMUSG00000040746.16	Rnf167	chr11	protein_coding	ring finger protein 167
chr11	70540172	70540271	+	70540120	70540271	A5SS	0.5	50	50	ENSMUST00000141695.8	ENSMUSG00000040746.16	Rnf167	chr11	protein_coding	ring finger protein 167
chr11	70543780	70545175	-	70543805	70545175	A3SS	0.5	50	50	ENSMUST00000018437.3	ENSMUSG00000018293.5	Pfn1	chr11	protein_coding	profilin 1
chr11	70548093	70548698	+	70548105	70548698	A5SS	0.5	50	50	ENSMUST00000157027.8	ENSMUSG00000060600.16	Eno3	chr11	protein_coding	enolase 3, beta muscle
chr11	70548093	70548586	+	70548093	70548698	A3SS	0.5	50	50	ENSMUST00000072841.12	ENSMUSG00000060600.16	Eno3	chr11	protein_coding	enolase 3, beta muscle
chr11	70551918	70552215	+	70552020	70552215	A5SS	0.5	50	50	ENSMUST00000072841.12	ENSMUSG00000060600.16	Eno3	chr11	protein_coding	enolase 3, beta muscle
chr11	70548148	70548586	+	70548093	70548586	A5SS	0.5	50	50	ENSMUST00000108548.8	ENSMUSG00000060600.16	Eno3	chr11	protein_coding	enolase 3, beta muscle
chr11	70555872	70556123	-	70555902	70556123	A3SS	0.5	50	50	ENSMUST00000018431.13	ENSMUSG00000018287.13	Spag7	chr11	protein_coding	sperm associated antigen 7
chr11	70573873	70574716	-	70573873;70574243	70574105;70574716	ES	0.25	50	50	ENSMUST00000145823.8	ENSMUSG00000040712.17	Camta2	chr11	protein_coding	calmodulin binding transcription activator 2
chr11	70576992	70578712	-	70576992	70577173	5pMXE	0.5	50	50	ENSMUST00000145823.8	ENSMUSG00000040712.17	Camta2	chr11	protein_coding	calmodulin binding transcription activator 2
chr11	70561562;70561737	70561717;70561834	-	70561562	70561834	cassetteExon	0.5	100	100	ENSMUST00000145823.8	ENSMUSG00000040712.17	Camta2	chr11	protein_coding	calmodulin binding transcription activator 2
chr11	70574176	70574716	-	70574243	70574716	A3SS	0.25	50	50	ENSMUST00000145823.8	ENSMUSG00000040712.17	Camta2	chr11	protein_coding	calmodulin binding transcription activator 2
chr11	70574191	70574716	-	70574243	70574716	A3SS	0.25	50	50	ENSMUST00000145823.8	ENSMUSG00000040712.17	Camta2	chr11	protein_coding	calmodulin binding transcription activator 2
chr11	70576992	70578712	-	70576992;70577267	70577173;70578712	ES	0.5	50	50	ENSMUST00000108545.9	ENSMUSG00000040712.17	Camta2	chr11	protein_coding	calmodulin binding transcription activator 2
chr11	70573873;70574176	70574105;70574716	-	70573873	70574716	cassetteExon	0.5	100	100	ENSMUST00000108545.9	ENSMUSG00000040712.17	Camta2	chr11	protein_coding	calmodulin binding transcription activator 2
chr11	70573873;70574191	70574105;70574716	-	70573873	70574716	cassetteExon	0.5	100	100	ENSMUST00000108545.9	ENSMUSG00000040712.17	Camta2	chr11	protein_coding	calmodulin binding transcription activator 2
chr11	70574176	70574716	-	70574191	70574716	A3SS	0.25	50	50	ENSMUST00000036299.14	ENSMUSG00000040712.17	Camta2	chr11	protein_coding	calmodulin binding transcription activator 2
chr11	70573873	70574716	-	70573873	70574105	5pMXE	0.5	50	50	ENSMUST00000125687.2	ENSMUSG00000040712.17	Camta2	chr11	protein_coding	calmodulin binding transcription activator 2
chr11	70581378;70585038	70584975;70586690	-	70581378	70586690	cassetteExon	0.5	100	100	ENSMUST00000108542.8	ENSMUSG00000057054.12	Inca1	chr11	protein_coding	inhibitor of CDK, cyclin A1 interacting protein 1
chr11	70586774	70590746	-	70586774	70590884	A5SS	0.25	50	50	ENSMUST00000108542.8	ENSMUSG00000057054.12	Inca1	chr11	protein_coding	inhibitor of CDK, cyclin A1 interacting protein 1
chr11	70586774	70590775	-	70586774	70590884	A5SS	0.25	50	50	ENSMUST00000108542.8	ENSMUSG00000057054.12	Inca1	chr11	protein_coding	inhibitor of CDK, cyclin A1 interacting protein 1
chr11	70586774	70590814	-	70586774	70590884	A5SS	0.25	50	50	ENSMUST00000108542.8	ENSMUSG00000057054.12	Inca1	chr11	protein_coding	inhibitor of CDK, cyclin A1 interacting protein 1
chr11	70586869	70590814	-	70586774	70590814	A3SS	0.5	50	50	ENSMUST00000108541.9	ENSMUSG00000057054.12	Inca1	chr11	protein_coding	inhibitor of CDK, cyclin A1 interacting protein 1
chr11	70586774	70590746	-	70586774	70590814	A5SS	0.25	50	50	ENSMUST00000108541.9	ENSMUSG00000057054.12	Inca1	chr11	protein_coding	inhibitor of CDK, cyclin A1 interacting protein 1
chr11	70586774	70590775	-	70586774	70590814	A5SS	0.25	50	50	ENSMUST00000108541.9	ENSMUSG00000057054.12	Inca1	chr11	protein_coding	inhibitor of CDK, cyclin A1 interacting protein 1
chr11	70586774	70590746	-	70586774	70590775	A5SS	0.25	50	50	ENSMUST00000126114.9	ENSMUSG00000057054.12	Inca1	chr11	protein_coding	inhibitor of CDK, cyclin A1 interacting protein 1
chr11	70591535	70593598	+	70591535;70593377	70593272;70593598	ES	0.5	50	50	ENSMUST00000152618.9	ENSMUSG00000020821.18	Kif1c	chr11	protein_coding	kinesin family member 1C
chr11	70591535	70593198	+	70591535	70593272	A3SS	0.25	50	50	ENSMUST00000152618.9	ENSMUSG00000020821.18	Kif1c	chr11	protein_coding	kinesin family member 1C
chr11	70591535	70593258	+	70591535	70593272	A3SS	0.25	50	50	ENSMUST00000152618.9	ENSMUSG00000020821.18	Kif1c	chr11	protein_coding	kinesin family member 1C
chr11	70616038	70616714	+	70616002	70616714	A5SS	0.5	50	50	ENSMUST00000102554.8	ENSMUSG00000020821.18	Kif1c	chr11	protein_coding	kinesin family member 1C
chr11	70591535	70593598	+	70591535;70593377	70593198;70593598	ES	0.5	50	50	ENSMUST00000094499.11	ENSMUSG00000020821.18	Kif1c	chr11	protein_coding	kinesin family member 1C
chr11	70591535	70593258	+	70591535	70593198	A3SS	0.25	50	50	ENSMUST00000094499.11	ENSMUSG00000020821.18	Kif1c	chr11	protein_coding	kinesin family member 1C
chr11	70591535;70593377	70593258;70593598	+	70591535	70593598	cassetteExon	0.5	100	100	ENSMUST00000072187.12	ENSMUSG00000020821.18	Kif1c	chr11	protein_coding	kinesin family member 1C
chr11	70688898	70691516	-	70688902	70691516	A3SS	0.5	50	50	ENSMUST00000108534.9	ENSMUSG00000057135.13	Scimp	chr11	protein_coding	SLP adaptor and CSK interacting membrane protein
chr11	70735834	70775591	+	70735834;70765700	70765572;70775591	ES	0.5	50	50	ENSMUST00000076270.13	ENSMUSG00000020817.17	Rabep1	chr11	protein_coding	rabaptin, RAB GTPase binding effector protein 1
chr11	70777997	70791298	+	70777997;70784514	70784395;70791298	ES	0.5	50	50	ENSMUST00000076270.13	ENSMUSG00000020817.17	Rabep1	chr11	protein_coding	rabaptin, RAB GTPase binding effector protein 1
chr11	70808608	70811678	+	70808608;70810107	70810003;70811678	ES	0.5	50	50	ENSMUST00000076270.13	ENSMUSG00000020817.17	Rabep1	chr11	protein_coding	rabaptin, RAB GTPase binding effector protein 1
chr11	70735834;70737335	70737265;70765572	+	70735834	70765572	cassetteExon	0.5	100	100	ENSMUST00000076270.13	ENSMUSG00000020817.17	Rabep1	chr11	protein_coding	rabaptin, RAB GTPase binding effector protein 1
chr11	70825420	70825947	+	70825420	70825953	A3SS	0.5	50	50	ENSMUST00000076270.13	ENSMUSG00000020817.17	Rabep1	chr11	protein_coding	rabaptin, RAB GTPase binding effector protein 1
chr11	70799382	70808141	+	70799343	70808141	A5SS	0.5	50	50	ENSMUST00000076270.13	ENSMUSG00000020817.17	Rabep1	chr11	protein_coding	rabaptin, RAB GTPase binding effector protein 1
chr11	70777997	70791298	+	70777997	70784395	3pMXE	0.5	50	50	ENSMUST00000179114.8	ENSMUSG00000020817.17	Rabep1	chr11	protein_coding	rabaptin, RAB GTPase binding effector protein 1
chr11	70735834	70737265	+	70735834	70775591	A3SS	0.33	50	50	ENSMUST00000178245.2	ENSMUSG00000020817.17	Rabep1	chr11	protein_coding	rabaptin, RAB GTPase binding effector protein 1
chr11	70841062	70845327	-	70841062;70842184	70842086;70845327	ES	0.5	50	50	ENSMUST00000148168.8	ENSMUSG00000040667.12	Nup88	chr11	protein_coding	nucleoporin 88
chr11	70838625	70840972	-	70838629	70840972	A3SS	0.5	50	50	ENSMUST00000148168.8	ENSMUSG00000040667.12	Nup88	chr11	protein_coding	nucleoporin 88
chr11	70834148	70834938	-	70834148	70834705	A5SS	0.5	50	50	ENSMUST00000148168.8	ENSMUSG00000040667.12	Nup88	chr11	protein_coding	nucleoporin 88
chr11	70858843	70859913	-	70858843	70860475	A5SS	0.5	50	50	ENSMUST00000148168.8	ENSMUSG00000040667.12	Nup88	chr11	protein_coding	nucleoporin 88
chr11	70834148	70834938	-	70834148;70834823	70834705;70834938	ES	0.33	50	50	ENSMUST00000108531.8	ENSMUSG00000040667.12	Nup88	chr11	protein_coding	nucleoporin 88
chr11	70834855	70834938	-	70834823	70834938	A3SS	0.33	50	50	ENSMUST00000108531.8	ENSMUSG00000040667.12	Nup88	chr11	protein_coding	nucleoporin 88
chr11	70835406	70835499	-	70835388	70835499	A3SS	0.5	50	50	ENSMUST00000108531.8	ENSMUSG00000040667.12	Nup88	chr11	protein_coding	nucleoporin 88
chr11	70835796	70836029	-	70835811	70836029	A3SS	0.5	50	50	ENSMUST00000108531.8	ENSMUSG00000040667.12	Nup88	chr11	protein_coding	nucleoporin 88
chr11	70834148;70834855	70834705;70834938	-	70834148	70834938	cassetteExon	0.5	100	100	ENSMUST00000178253.8	ENSMUSG00000040667.12	Nup88	chr11	protein_coding	nucleoporin 88
chr11	70834148	70834938	-	70834823	70834938	3pMXE	0.33	50	50	ENSMUST00000141179.8	ENSMUSG00000040667.12	Nup88	chr11	protein_coding	nucleoporin 88
chr11	70834148	70834938	-	70834855	70834938	3pMXE	0.33	50	50	ENSMUST00000133188.2	ENSMUSG00000040667.12	Nup88	chr11	protein_coding	nucleoporin 88
chr11	70863901	70864895	+	70863901;70864739	70864628;70864895	ES	0.5	50	50	ENSMUST00000018593.10	ENSMUSG00000018449.13	Rpain	chr11	protein_coding	RPA interacting protein
chr11	70864958	70868484	+	70864958;70865866	70865726;70868484	ES	0.25	50	50	ENSMUST00000018593.10	ENSMUSG00000018449.13	Rpain	chr11	protein_coding	RPA interacting protein
chr11	70861413;70861920	70861679;70862590	+	70861413	70862590	cassetteExon	0.5	100	100	ENSMUST00000018593.10	ENSMUSG00000018449.13	Rpain	chr11	protein_coding	RPA interacting protein
chr11	70864958	70865820	+	70864958	70865726	A3SS	0.33	50	50	ENSMUST00000018593.10	ENSMUSG00000018449.13	Rpain	chr11	protein_coding	RPA interacting protein
chr11	70863901	70868484	+	70863901	70864895	3pMXE	0.33	50	50	ENSMUST00000126815.8	ENSMUSG00000018449.13	Rpain	chr11	protein_coding	RPA interacting protein
chr11	70862760	70868484	+	70862760	70863841	3pMXE	0.5	50	50	ENSMUST00000129531.8	ENSMUSG00000018449.13	Rpain	chr11	protein_coding	RPA interacting protein
chr11	70864958	70868484	+	70864958;70865866	70865820;70868484	ES	0.25	50	50	ENSMUST00000178822.8	ENSMUSG00000018449.13	Rpain	chr11	protein_coding	RPA interacting protein
chr11	70862760;70863901	70863841;70868484	+	70862760	70868484	cassetteExon	0.5	100	100	ENSMUST00000108529.10	ENSMUSG00000018449.13	Rpain	chr11	protein_coding	RPA interacting protein
chr11	70864958	70868484	+	70862760	70868484	A5SS	0.25	50	50	ENSMUST00000108529.10	ENSMUSG00000018449.13	Rpain	chr11	protein_coding	RPA interacting protein
chr11	70865866	70868484	+	70862760	70868484	A5SS	0.25	50	50	ENSMUST00000108529.10	ENSMUSG00000018449.13	Rpain	chr11	protein_coding	RPA interacting protein
chr11	70863901;70864958	70864628;70868484	+	70863901	70868484	cassetteExon	0.5	100	100	ENSMUST00000169965.8	ENSMUSG00000018449.13	Rpain	chr11	protein_coding	RPA interacting protein
chr11	70863901;70864958	70864895;70868484	+	70863901	70868484	cassetteExon	0.5	100	100	ENSMUST00000169965.8	ENSMUSG00000018449.13	Rpain	chr11	protein_coding	RPA interacting protein
chr11	70865866	70868484	+	70863901	70868484	A5SS	0.25	50	50	ENSMUST00000169965.8	ENSMUSG00000018449.13	Rpain	chr11	protein_coding	RPA interacting protein
chr11	70862760	70868484	+	70863901	70868484	5pMXE	0.25	50	50	ENSMUST00000146788.2	ENSMUSG00000018449.13	Rpain	chr11	protein_coding	RPA interacting protein
chr11	70864958	70868484	+	70865866	70868484	5pMXE	0.25	50	50	ENSMUST00000129540.2	ENSMUSG00000018449.13	Rpain	chr11	protein_coding	RPA interacting protein
chr11	70883137	70884436	-	70883137;70883612	70883485;70884436	ES	0.5	50	50	ENSMUST00000108527.8	ENSMUSG00000040620.16	Dhx33	chr11	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 33
chr11	70884842	70886714	-	70884842;70886076	70885965;70886714	ES	0.5	50	50	ENSMUST00000108527.8	ENSMUSG00000040620.16	Dhx33	chr11	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 33
chr11	70890774	70894943	-	70890774;70892505	70892345;70894943	ES	0.33	50	50	ENSMUST00000108527.8	ENSMUSG00000040620.16	Dhx33	chr11	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 33
chr11	70890774	70891701	-	70890774	70892345	A5SS	0.33	50	50	ENSMUST00000108527.8	ENSMUSG00000040620.16	Dhx33	chr11	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 33
chr11	70883137	70884683	-	70883137;70884524	70884436;70884683	ES	0.5	50	50	ENSMUST00000146203.8	ENSMUSG00000040620.16	Dhx33	chr11	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 33
chr11	70890774	70891701	-	70890774	70894943	A5SS	0.33	50	50	ENSMUST00000049048.13	ENSMUSG00000040620.16	Dhx33	chr11	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 33
chr11	70890774	70894943	-	70886899	70894943	A3SS	0.33	50	50	ENSMUST00000124464.2	ENSMUSG00000040620.16	Dhx33	chr11	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 33
chr11	70892505	70894943	-	70886899	70894943	A3SS	0.33	50	50	ENSMUST00000124464.2	ENSMUSG00000040620.16	Dhx33	chr11	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 33
chr11	70886899	70890196	-	70886899	70894943	A5SS	0.5	50	50	ENSMUST00000124464.2	ENSMUSG00000040620.16	Dhx33	chr11	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 33
chr11	70883137	70883485	-	70883137	70884683	A5SS	0.33	50	50	ENSMUST00000155044.2	ENSMUSG00000040620.16	Dhx33	chr11	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 33
chr11	70883137	70884683	-	70884524	70884683	3pMXE	0.5	50	50	ENSMUST00000178111.2	ENSMUSG00000040620.16	Dhx33	chr11	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 33
chr11	70884842	70886714	-	70886076	70886714	3pMXE	0.5	50	50	ENSMUST00000123860.2	ENSMUSG00000040620.16	Dhx33	chr11	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 33
chr11	70890774	70894943	-	70892505	70894943	A3SS	0.33	50	50	ENSMUST00000178218.2	ENSMUSG00000040620.16	Dhx33	chr11	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 33
chr11	70904464	70906553	-	70904464;70905469	70905376;70906553	ES	0.5	50	50	ENSMUST00000108523.10	ENSMUSG00000018442.14	Derl2	chr11	protein_coding	Der1-like domain family, member 2
chr11	70909203	70910217	-	70909203	70909970	5pMXE	0.25	50	50	ENSMUST00000108523.10	ENSMUSG00000018442.14	Derl2	chr11	protein_coding	Der1-like domain family, member 2
chr11	70909203	70909766	-	70909203	70909970	A5SS	0.25	50	50	ENSMUST00000108523.10	ENSMUSG00000018442.14	Derl2	chr11	protein_coding	Der1-like domain family, member 2
chr11	70909203	70909935	-	70909203	70909970	A5SS	0.25	50	50	ENSMUST00000108523.10	ENSMUSG00000018442.14	Derl2	chr11	protein_coding	Der1-like domain family, member 2
chr11	70909203	70909766	-	70909203	70910217	A5SS	0.25	50	50	ENSMUST00000171041.8	ENSMUSG00000018442.14	Derl2	chr11	protein_coding	Der1-like domain family, member 2
chr11	70909203	70909935	-	70909203	70910217	A5SS	0.25	50	50	ENSMUST00000171041.8	ENSMUSG00000018442.14	Derl2	chr11	protein_coding	Der1-like domain family, member 2
chr11	70909203	70909766	-	70909203	70909935	A5SS	0.25	50	50	ENSMUST00000132198.8	ENSMUSG00000018442.14	Derl2	chr11	protein_coding	Der1-like domain family, member 2
chr11	70904464	70906553	-	70905469	70906553	3pMXE	0.5	50	50	ENSMUST00000131340.2	ENSMUSG00000018442.14	Derl2	chr11	protein_coding	Der1-like domain family, member 2
chr11	70910549;70911015	70910832;70915376	+	70910549	70915376	cassetteExon	0.5	100	100	ENSMUST00000133413.8	ENSMUSG00000040599.14	Mis12	chr11	protein_coding	MIS12 kinetochore complex component
chr11	70910549;70911015	70910832;70915936	+	70910549;70915537	70915376;70915936	MXE	0.5	100	100	ENSMUST00000133413.8	ENSMUSG00000040599.14	Mis12	chr11	protein_coding	MIS12 kinetochore complex component
chr11	70910804	70915376	+	70910549	70915376	A5SS	0.33	50	50	ENSMUST00000133413.8	ENSMUSG00000040599.14	Mis12	chr11	protein_coding	MIS12 kinetochore complex component
chr11	70911015	70915936	+	70911015;70915537	70915376;70915936	ES	0.5	50	50	ENSMUST00000164220.8	ENSMUSG00000040599.14	Mis12	chr11	protein_coding	MIS12 kinetochore complex component
chr11	70911015	70915384	+	70911015	70915376	A3SS	0.33	50	50	ENSMUST00000164220.8	ENSMUSG00000040599.14	Mis12	chr11	protein_coding	MIS12 kinetochore complex component
chr11	70910804	70915376	+	70911015	70915376	A5SS&ES	0.33	50	50	ENSMUST00000164220.8	ENSMUSG00000040599.14	Mis12	chr11	protein_coding	MIS12 kinetochore complex component
chr11	70910549	70915376	+	70911015	70915376	A5SS	0.33	50	50	ENSMUST00000048807.12	ENSMUSG00000040599.14	Mis12	chr11	protein_coding	MIS12 kinetochore complex component
chr11	70911015	70915936	+	70915537	70915936	A5SS&ES	0.5	50	50	ENSMUST00000155236.2	ENSMUSG00000040599.14	Mis12	chr11	protein_coding	MIS12 kinetochore complex component
chr11	70911015	70915936	+	70911015;70915537	70915384;70915936	ES	0.5	50	50	ENSMUST00000143762.2	ENSMUSG00000040599.14	Mis12	chr11	protein_coding	MIS12 kinetochore complex component
chr11	70998538	70999803	-	70998886	70999803	A3SS&ES	0.5	50	50	ENSMUST00000048514.11	ENSMUSG00000069830.11	Nlrp1a	chr11	protein_coding	NLR family, pyrin domain containing 1A
chr11	71004464	71005211	-	71004958	71005211	A3SS&ES	0.5	50	50	ENSMUST00000048514.11	ENSMUSG00000069830.11	Nlrp1a	chr11	protein_coding	NLR family, pyrin domain containing 1A
chr11	71063221	71063785	-	71063061	71063785	A3SS	0.5	50	50	ENSMUST00000108515.9	ENSMUSG00000070390.13	Nlrp1b	chr11	protein_coding	NLR family, pyrin domain containing 1B
chr11	71063955	71072016	-	71063955	71107683	A5SS	0.5	50	50	ENSMUST00000136493.8	ENSMUSG00000070390.13	Nlrp1b	chr11	protein_coding	NLR family, pyrin domain containing 1B
chr11	71439080	71463030	+	71439080	71439826	3pMXE	0.5	50	50	ENSMUST00000215201.2	ENSMUSG00000072753.13	9230020A06Rik	chr11	lncRNA	RIKEN cDNA 9230020A06 gene
chr11	71407698	71438991	+	71438906	71438991	A5SS&ES	0.33	50	50	ENSMUST00000215201.2	ENSMUSG00000072753.13	9230020A06Rik	chr11	lncRNA	RIKEN cDNA 9230020A06 gene
chr11	71434927	71438599	+	71406451	71438599	A5SS	0.5	50	50	ENSMUST00000215201.2	ENSMUSG00000072753.13	9230020A06Rik	chr11	lncRNA	RIKEN cDNA 9230020A06 gene
chr11	71438809	71438991	+	71438906	71438991	A5SS	0.33	50	50	ENSMUST00000215201.2	ENSMUSG00000072753.13	9230020A06Rik	chr11	lncRNA	RIKEN cDNA 9230020A06 gene
chr11	71407698	71433509	+	71407698	71438991	A3SS	0.5	50	50	ENSMUST00000214621.2	ENSMUSG00000072753.13	9230020A06Rik	chr11	lncRNA	RIKEN cDNA 9230020A06 gene
chr11	71438809	71438991	+	71407698	71438991	A5SS	0.33	50	50	ENSMUST00000214621.2	ENSMUSG00000072753.13	9230020A06Rik	chr11	lncRNA	RIKEN cDNA 9230020A06 gene
chr11	71462809	71463060	-	71462809	71465390	A5SS	0.5	50	50	ENSMUST00000213352.2	ENSMUSG00000111450.2	Gm33351	chr11	lncRNA	predicted gene, 33351
chr11	71630957	71631078	-	71630625	71631078	A3SS	0.5	50	50	ENSMUST00000132986.2	ENSMUSG00000085251.2	Gm12326	chr11	lncRNA	predicted gene 12326
chr11	71641651	71650404	+	71640926	71650404	A5SS	0.25	50	50	ENSMUST00000150531.2	ENSMUSG00000020811.17	Wscd1	chr11	protein_coding	WSC domain containing 1
chr11	71642055	71650404	+	71640926	71650404	A5SS	0.25	50	50	ENSMUST00000150531.2	ENSMUSG00000020811.17	Wscd1	chr11	protein_coding	WSC domain containing 1
chr11	71642541	71650404	+	71640926	71650404	A5SS	0.25	50	50	ENSMUST00000150531.2	ENSMUSG00000020811.17	Wscd1	chr11	protein_coding	WSC domain containing 1
chr11	71675259	71676055	+	71675259	71678544	A3SS	0.5	50	50	ENSMUST00000021168.14	ENSMUSG00000020811.17	Wscd1	chr11	protein_coding	WSC domain containing 1
chr11	71642055	71650404	+	71641651	71650404	A5SS	0.25	50	50	ENSMUST00000021168.14	ENSMUSG00000020811.17	Wscd1	chr11	protein_coding	WSC domain containing 1
chr11	71642541	71650404	+	71641651	71650404	A5SS	0.25	50	50	ENSMUST00000021168.14	ENSMUSG00000020811.17	Wscd1	chr11	protein_coding	WSC domain containing 1
chr11	71642541	71650404	+	71642055	71650404	A5SS	0.25	50	50	ENSMUST00000108511.8	ENSMUSG00000020811.17	Wscd1	chr11	protein_coding	WSC domain containing 1
chr11	71921428;71922031	71921954;71922243	-	71921428	71922243	cassetteExon	0.5	100	100	ENSMUST00000048207.10	ENSMUSG00000040554.11	Aipl1	chr11	protein_coding	aryl hydrocarbon receptor-interacting protein-like 1
chr11	71933360	71933843	+	71933132	71933843	A5SS	0.5	50	50	ENSMUST00000122871.2	ENSMUSG00000020808.4	Pimreg	chr11	protein_coding	PICALM interacting mitotic regulator
chr11	71934163	71936505	+	71934163;71936084	71935807;71936505	ES	0.5	50	50	ENSMUST00000021164.4	ENSMUSG00000020808.4	Pimreg	chr11	protein_coding	PICALM interacting mitotic regulator
chr11	71934163	71936505	+	71934163	71935807	3pMXE	0.5	50	50	ENSMUST00000125655.2	ENSMUSG00000020808.4	Pimreg	chr11	protein_coding	PICALM interacting mitotic regulator
chr11	71965861;71983401	71983354;72003083	-	71965861	72003083	cassetteExon	0.5	100	100	ENSMUST00000108508.3	ENSMUSG00000040543.17	Pitpnm3	chr11	protein_coding	PITPNM family member 3
chr11	72050346	72057464	-	72050346;72056424	72056343;72057464	ES	0.5	50	50	ENSMUST00000142530.8	ENSMUSG00000020807.16	4933427D14Rik	chr11	protein_coding	RIKEN cDNA 4933427D14 gene
chr11	72080584	72082245	-	72080584;72082170	72082104;72082245	ES	0.5	50	50	ENSMUST00000142530.8	ENSMUSG00000020807.16	4933427D14Rik	chr11	protein_coding	RIKEN cDNA 4933427D14 gene
chr11	72089789	72098022	-	72089789;72093380	72093238;72098022	ES	0.5	50	50	ENSMUST00000142530.8	ENSMUSG00000020807.16	4933427D14Rik	chr11	protein_coding	RIKEN cDNA 4933427D14 gene
chr11	72060669	72066029	-	72060685	72066029	A3SS	0.5	50	50	ENSMUST00000142530.8	ENSMUSG00000020807.16	4933427D14Rik	chr11	protein_coding	RIKEN cDNA 4933427D14 gene
chr11	72093380	72094020	-	72093380	72098022	A5SS	0.5	50	50	ENSMUST00000142530.8	ENSMUSG00000020807.16	4933427D14Rik	chr11	protein_coding	RIKEN cDNA 4933427D14 gene
chr11	72089789	72098022	-	72089789	72093238	5pMXE	0.5	50	50	ENSMUST00000144553.2	ENSMUSG00000020807.16	4933427D14Rik	chr11	protein_coding	RIKEN cDNA 4933427D14 gene
chr11	72134462	72138493	-	72134462;72136089	72135952;72138493	ES	0.5	50	50	ENSMUST00000021161.14	ENSMUSG00000020805.15	Slc13a5	chr11	protein_coding	solute carrier family 13 (sodium-dependent citrate transporter), member 5
chr11	72152575	72157290	-	72152575;72152977	72152849;72157290	ES	0.33	50	50	ENSMUST00000021161.14	ENSMUSG00000020805.15	Slc13a5	chr11	protein_coding	solute carrier family 13 (sodium-dependent citrate transporter), member 5
chr11	72151157	72152439	-	72151208	72152439	A3SS	0.5	50	50	ENSMUST00000021161.14	ENSMUSG00000020805.15	Slc13a5	chr11	protein_coding	solute carrier family 13 (sodium-dependent citrate transporter), member 5
chr11	72152866	72157290	-	72152977	72157290	A3SS	0.33	50	50	ENSMUST00000021161.14	ENSMUSG00000020805.15	Slc13a5	chr11	protein_coding	solute carrier family 13 (sodium-dependent citrate transporter), member 5
chr11	72152575;72152866	72152849;72157290	-	72152575	72157290	cassetteExon	0.5	100	100	ENSMUST00000208912.2	ENSMUSG00000020805.15	Slc13a5	chr11	protein_coding	solute carrier family 13 (sodium-dependent citrate transporter), member 5
chr11	72194288;72197478	72197390;72199433	+	72194288	72199433	cassetteExon	0.5	100	100	ENSMUST00000151440.8	ENSMUSG00000040483.16	Xaf1	chr11	protein_coding	XIAP associated factor 1
chr11	72194288	72195492	+	72194288	72199433	A3SS	0.33	50	50	ENSMUST00000151440.8	ENSMUSG00000040483.16	Xaf1	chr11	protein_coding	XIAP associated factor 1
chr11	72194288	72197390	+	72194288;72195687	72195492;72197390	ES	0.5	50	50	ENSMUST00000146233.8	ENSMUSG00000040483.16	Xaf1	chr11	protein_coding	XIAP associated factor 1
chr11	72250711	72252619	-	72250711	72252036	5pMXE	0.33	50	50	ENSMUST00000108502.8	ENSMUSG00000020799.17	Tekt1	chr11	protein_coding	tektin 1
chr11	72250711	72253131	-	72250711	72252036	5pMXE	0.33	50	50	ENSMUST00000108502.8	ENSMUSG00000020799.17	Tekt1	chr11	protein_coding	tektin 1
chr11	72250711	72253131	-	72250711	72252619	5pMXE	0.33	50	50	ENSMUST00000108503.9	ENSMUSG00000020799.17	Tekt1	chr11	protein_coding	tektin 1
chr11	72292220	72293837	-	72293326	72293837	A3SS&ES	0.5	50	50	ENSMUST00000108500.8	ENSMUSG00000045667.15	Smtnl2	chr11	protein_coding	smoothelin-like 2
chr11	72327467	72327965	+	72327467;72327658	72327545;72327965	ES	0.33	50	50	ENSMUST00000076443.10	ENSMUSG00000040471.18	Ggt6	chr11	protein_coding	gamma-glutamyltransferase 6
chr11	72326590;72327467	72327265;72327965	+	72326590	72327965	cassetteExon	0.5	100	100	ENSMUST00000108499.2	ENSMUSG00000040471.18	Ggt6	chr11	protein_coding	gamma-glutamyltransferase 6
chr11	72326590;72327658	72327265;72327965	+	72326590	72327965	cassetteExon	0.5	100	100	ENSMUST00000108499.2	ENSMUSG00000040471.18	Ggt6	chr11	protein_coding	gamma-glutamyltransferase 6
chr11	72339203	72339869	+	72339203;72339789	72339558;72339869	ES	0.5	50	50	ENSMUST00000045633.6	ENSMUSG00000040463.17	Mybbp1a	chr11	protein_coding	MYB binding protein (P160) 1a
chr11	72345043	72347129	-	72345043;72345224	72345126;72347129	ES	0.5	50	50	ENSMUST00000045303.10	ENSMUSG00000040447.16	Spns2	chr11	protein_coding	spinster homolog 2
chr11	72344528	72344880	-	72344426	72344880	A3SS	0.33	50	50	ENSMUST00000045303.10	ENSMUSG00000040447.16	Spns2	chr11	protein_coding	spinster homolog 2
chr11	72344540	72344880	-	72344426	72344880	A3SS	0.33	50	50	ENSMUST00000045303.10	ENSMUSG00000040447.16	Spns2	chr11	protein_coding	spinster homolog 2
chr11	72365596	72365707	-	72365596	72380252	A5SS	0.5	50	50	ENSMUST00000045303.10	ENSMUSG00000040447.16	Spns2	chr11	protein_coding	spinster homolog 2
chr11	72345043	72347129	-	72345043	72345126	5pMXE	0.5	50	50	ENSMUST00000129274.8	ENSMUSG00000040447.16	Spns2	chr11	protein_coding	spinster homolog 2
chr11	72344528	72344880	-	72344540	72344880	A3SS	0.33	50	50	ENSMUST00000150491.2	ENSMUSG00000040447.16	Spns2	chr11	protein_coding	spinster homolog 2
chr11	72390562	72395882	-	72390562	72393078	5pMXE	0.5	50	50	ENSMUST00000155774.2	ENSMUSG00000020798.15	Spns3	chr11	protein_coding	spinster homolog 3
chr11	72431377	72440824	-	72431377;72436779	72436714;72440824	ES	0.5	50	50	ENSMUST00000092940.13	ENSMUSG00000020798.15	Spns3	chr11	protein_coding	spinster homolog 3
chr11	72498461;72536478	72536363;72553897	+	72498461	72553897	cassetteExon	0.5	100	100	ENSMUST00000021148.13	ENSMUSG00000020794.14	Ube2g1	chr11	protein_coding	ubiquitin-conjugating enzyme E2G 1
chr11	72603175	72613454	+	72603175;72605309	72605191;72613454	ES	0.5	50	50	ENSMUST00000150172.8	ENSMUSG00000020790.15	Ankfy1	chr11	protein_coding	ankyrin repeat and FYVE domain containing 1
chr11	72630883	72631228	+	72630932	72631228	A5SS	0.5	50	50	ENSMUST00000127610.8	ENSMUSG00000020790.15	Ankfy1	chr11	protein_coding	ankyrin repeat and FYVE domain containing 1
chr11	72669778	72679903	-	72669778;72673660	72673474;72679903	ES	0.5	50	50	ENSMUST00000079681.6	ENSMUSG00000057778.15	Cyb5d2	chr11	protein_coding	cytochrome b5 domain containing 2
chr11	72680043	72686843	-	72680043	72686339	5pMXE	0.5	50	50	ENSMUST00000079681.6	ENSMUSG00000057778.15	Cyb5d2	chr11	protein_coding	cytochrome b5 domain containing 2
chr11	72733951	72734082	+	72728107	72734082	A5SS	0.5	50	50	ENSMUST00000150551.8	ENSMUSG00000055670.15	Zzef1	chr11	protein_coding	zinc finger, ZZ-type with EF hand domain 1
chr11	72790607	72791458	+	72790520	72791458	A5SS	0.5	50	50	ENSMUST00000069395.7	ENSMUSG00000055670.15	Zzef1	chr11	protein_coding	zinc finger, ZZ-type with EF hand domain 1
chr11	72804134	72806043	+	72804236	72806043	A5SS	0.5	50	50	ENSMUST00000069395.7	ENSMUSG00000055670.15	Zzef1	chr11	protein_coding	zinc finger, ZZ-type with EF hand domain 1
chr11	72879913	72882515	+	72879913;72880386	72880301;72882515	ES	0.33	50	50	ENSMUST00000163326.8	ENSMUSG00000020788.16	Atp2a3	chr11	protein_coding	ATPase, Ca++ transporting, ubiquitous
chr11	72871171	72871319	+	72871171	72871265	A3SS	0.5	50	50	ENSMUST00000163326.8	ENSMUSG00000020788.16	Atp2a3	chr11	protein_coding	ATPase, Ca++ transporting, ubiquitous
chr11	72880373	72882515	+	72880386	72882515	A5SS	0.33	50	50	ENSMUST00000163326.8	ENSMUSG00000020788.16	Atp2a3	chr11	protein_coding	ATPase, Ca++ transporting, ubiquitous
chr11	72879913;72880373	72880301;72882515	+	72879913	72882515	cassetteExon	0.5	100	100	ENSMUST00000108485.9	ENSMUSG00000020788.16	Atp2a3	chr11	protein_coding	ATPase, Ca++ transporting, ubiquitous
chr11	72900108	72900756	+	72900108;72900492	72900412;72900756	ES	0.5	50	50	ENSMUST00000021141.14	ENSMUSG00000020787.15	P2rx1	chr11	protein_coding	purinergic receptor P2X, ligand-gated ion channel, 1
chr11	72908918	72909483	-	72907339	72909483	A3SS	0.5	50	50	ENSMUST00000180695.2	ENSMUSG00000086943.3	4732414G09Rik	chr11	lncRNA	RIKEN cDNA 4732414G09 gene
chr11	72928451	72929238	+	72928451;72928803	72928675;72929238	ES	0.5	50	50	ENSMUST00000155720.2	ENSMUSG00000020785.18	Camkk1	chr11	protein_coding	calcium/calmodulin-dependent protein kinase kinase 1, alpha
chr11	72944354	72947431	+	72944354	72955814	A3SS	0.5	50	50	ENSMUST00000021135.5	ENSMUSG00000020783.15	Ncbp3	chr11	protein_coding	nuclear cap binding subunit 3
chr11	73055832	73056969	+	73055832;73056437	73056366;73056969	ES	0.5	50	50	ENSMUST00000006104.10	ENSMUSG00000005950.15	P2rx5	chr11	protein_coding	purinergic receptor P2X, ligand-gated ion channel, 5
chr11	73058798	73061242	+	73058798;73058980	73058915;73061242	ES	0.5	50	50	ENSMUST00000006104.10	ENSMUSG00000005950.15	P2rx5	chr11	protein_coding	purinergic receptor P2X, ligand-gated ion channel, 5
chr11	73067577	73067682	-	73067577	73067765	A5SS	0.5	50	50	ENSMUST00000054952.4	ENSMUSG00000047260.5	Emc6	chr11	protein_coding	ER membrane protein complex subunit 6
chr11	73071334	73071914	+	73071334;73071634	73071557;73071914	ES	0.5	50	50	ENSMUST00000040687.12	ENSMUSG00000040158.13	Tax1bp3	chr11	protein_coding	Tax1 (human T cell leukemia virus type I) binding protein 3
chr11	73071334	73071914	+	73071334	73071557	A3SS	0.5	50	50	ENSMUST00000150407.2	ENSMUSG00000040158.13	Tax1bp3	chr11	protein_coding	Tax1 (human T cell leukemia virus type I) binding protein 3
chr11	73083959;73086111	73085953;73087464	-	73083959	73087464	cassetteExon	0.5	100	100	ENSMUST00000006103.9	ENSMUSG00000005949.10	Ctns	chr11	protein_coding	cystinosis, nephropathic
chr11	73087543;73088078	73087925;73089744	-	73087543	73089744	cassetteExon	0.5	100	100	ENSMUST00000006103.9	ENSMUSG00000005949.10	Ctns	chr11	protein_coding	cystinosis, nephropathic
chr11	73094889	73104157	+	73094889	73097142	A3SS&ES	0.5	50	50	ENSMUST00000131927.9	ENSMUSG00000005951.14	Shpk	chr11	protein_coding	sedoheptulokinase
chr11	73131507	73135029	+	73131507;73132611	73132432;73135029	ES	0.5	50	50	ENSMUST00000102526.9	ENSMUSG00000005952.16	Trpv1	chr11	protein_coding	transient receptor potential cation channel, subfamily V, member 1
chr11	73143317	73143849	+	73142149	73143849	A5SS	0.5	50	50	ENSMUST00000102526.9	ENSMUSG00000005952.16	Trpv1	chr11	protein_coding	transient receptor potential cation channel, subfamily V, member 1
chr11	73213107;73214057	73213905;73215081	-	73213107	73215081	cassetteExon	0.5	100	100	ENSMUST00000021119.9	ENSMUSG00000020774.10	Aspa	chr11	protein_coding	aspartoacylase
chr11	73215343	73217189	-	73215343	73220090	A5SS	0.33	50	50	ENSMUST00000184572.8	ENSMUSG00000020774.10	Aspa	chr11	protein_coding	aspartoacylase
chr11	73215343	73217609	-	73215343	73220090	A5SS	0.33	50	50	ENSMUST00000184572.8	ENSMUSG00000020774.10	Aspa	chr11	protein_coding	aspartoacylase
chr11	73215343	73217609	-	73215343	73217189	5pMXE	0.33	50	50	ENSMUST00000155630.9	ENSMUSG00000020774.10	Aspa	chr11	protein_coding	aspartoacylase
chr11	73241785	73244565	+	73236621	73244565	A5SS	0.5	50	50	ENSMUST00000117445.2	ENSMUSG00000069825.13	Gm49340	chr11	protein_coding	predicted gene, 49340
chr11	73262196	73265577	+	73262196;73262889	73262759;73265577	ES	0.5	50	50	ENSMUST00000078952.9	ENSMUSG00000063881.12	Olfr376	chr11	protein_coding	olfactory receptor 376
chr11	73286860	73287401	-	73286860	73287433	A5SS	0.5	50	50	ENSMUST00000120303.9	ENSMUSG00000069823.12	Olfr1	chr11	protein_coding	olfactory receptor 1
chr11	73297222	73300535	-	73297222;73298172	73297989;73300535	ES	0.5	50	50	ENSMUST00000144832.4	ENSMUSG00000086278.6	Olfr75-ps1	chr11	transcribed_unprocessed_pseudogene	olfactory receptor 75, pseudogene 1
chr11	73345053	73348141	-	73345053;73346014	73345832;73348141	ES	0.5	50	50	ENSMUST00000121209.3	ENSMUSG00000072709.4	Olfr380	chr11	protein_coding	olfactory receptor 380
chr11	73377665	73382340	-	73377665	73382213	5pMXE	0.5	50	50	ENSMUST00000215358.2	ENSMUSG00000072708.4	Olfr381	chr11	protein_coding	olfactory receptor 381
chr11	73377686	73382213	-	73377665	73382213	A3SS	0.5	50	50	ENSMUST00000215358.2	ENSMUSG00000072708.4	Olfr381	chr11	protein_coding	olfactory receptor 381
chr11	73579797	73581107	+	73579797;73580644	73580518;73581107	ES	0.5	50	50	ENSMUST00000080407.6	ENSMUSG00000060630.8	Zfp735	chr11	protein_coding	zinc finger protein 735
chr11	73584908	73601296	+	73581202	73601296	A5SS	0.5	50	50	ENSMUST00000080407.6	ENSMUSG00000060630.8	Zfp735	chr11	protein_coding	zinc finger protein 735
chr11	73668167	73671252	-	73668167;73670121	73669413;73671252	ES	0.5	50	50	ENSMUST00000215418.2	ENSMUSG00000070383.6	Olfr389	chr11	protein_coding	olfactory receptor 389
chr11	73668167	73669846	-	73668167	73669413	A5SS	0.33	50	50	ENSMUST00000215418.2	ENSMUSG00000070383.6	Olfr389	chr11	protein_coding	olfactory receptor 389
chr11	73668167	73671252	-	73668167;73670121	73669846;73671252	ES	0.5	50	50	ENSMUST00000122224.4	ENSMUSG00000070383.6	Olfr389	chr11	protein_coding	olfactory receptor 389
chr11	73668167	73669413	-	73668167	73671252	A5SS	0.33	50	50	ENSMUST00000124927.3	ENSMUSG00000070383.6	Olfr389	chr11	protein_coding	olfactory receptor 389
chr11	73673879;73674922	73674835;73677759	+	73673879	73677759	cassetteExon	0.5	100	100	ENSMUST00000120081.3	ENSMUSG00000069818.7	Olfr390	chr11	protein_coding	olfactory receptor 390
chr11	73673879;73676220	73676083;73677759	+	73673879	73677759	cassetteExon	0.5	100	100	ENSMUST00000120081.3	ENSMUSG00000069818.7	Olfr390	chr11	protein_coding	olfactory receptor 390
chr11	73673879;73674922	73674835;73677759	+	73673879;73676220	73676083;73677759	MXE	0.5	100	100	ENSMUST00000215161.2	ENSMUSG00000069818.7	Olfr390	chr11	protein_coding	olfactory receptor 390
chr11	73706178	73707585	-	73705917	73707585	A3SS	0.5	50	50	ENSMUST00000118463.4	ENSMUSG00000061984.7	Olfr392	chr11	protein_coding	olfactory receptor 392
chr11	73780174	73781462	-	73780240	73781462	A3SS	0.5	50	50	ENSMUST00000216608.2	ENSMUSG00000056921.3	Olfr394	chr11	protein_coding	olfactory receptor 394
chr11	73851734;73852338	73852219;73854683	+	73851734	73854683	cassetteExon	0.5	100	100	ENSMUST00000213134.2	ENSMUSG00000057050.8	Olfr397	chr11	protein_coding	olfactory receptor 397
chr11	73851734	73855467	+	73851734	73854683	A3SS	0.33	50	50	ENSMUST00000213134.2	ENSMUSG00000057050.8	Olfr397	chr11	protein_coding	olfactory receptor 397
chr11	73851734	73855467	+	73851734	73852219	A3SS&ES	0.33	50	50	ENSMUST00000216291.2	ENSMUSG00000057050.8	Olfr397	chr11	protein_coding	olfactory receptor 397
chr11	73936114	73942191	-	73936114	73938066	5pMXE	0.5	50	50	ENSMUST00000214111.2	ENSMUSG00000047444.4	Olfr139	chr11	protein_coding	olfactory receptor 139
chr11	73941450	73942191	-	73936114	73942191	A3SS	0.5	50	50	ENSMUST00000206280.2	ENSMUSG00000047444.4	Olfr139	chr11	protein_coding	olfactory receptor 139
chr11	73945643	73947337	-	73942244	73947337	A3SS	0.5	50	50	ENSMUST00000206280.2	ENSMUSG00000047444.4	Olfr139	chr11	protein_coding	olfactory receptor 139
chr11	73942244	73944834	-	73942244	73947337	A5SS	0.5	50	50	ENSMUST00000206280.2	ENSMUSG00000047444.4	Olfr139	chr11	protein_coding	olfactory receptor 139
chr11	73961163	73962484	+	73961163;73962022	73961896;73962484	ES	0.5	50	50	ENSMUST00000108463.8	ENSMUSG00000069476.14	Zfp616	chr11	protein_coding	zinc finger protein 616
chr11	73962566	73973698	+	73962579	73973698	A5SS	0.5	50	50	ENSMUST00000108463.8	ENSMUSG00000069476.14	Zfp616	chr11	protein_coding	zinc finger protein 616
chr11	74077405	74083884	+	74077405	74086326	A3SS	0.5	50	50	ENSMUST00000206114.3	ENSMUSG00000070378.4	Olfr403	chr11	protein_coding	olfactory receptor 403
chr11	74099609	74101763	-	74099528	74101763	A3SS	0.5	50	50	ENSMUST00000205664.3	ENSMUSG00000070377.7	Olfr43	chr11	protein_coding	olfactory receptor 43
chr11	74150961;74155887	74155612;74160129	+	74150961	74160129	cassetteExon	0.5	100	100	ENSMUST00000217016.2	ENSMUSG00000070375.8	Olfr406	chr11	protein_coding	olfactory receptor 406
chr11	74174875	74179388	+	74174875	74179386	A3SS	0.5	50	50	ENSMUST00000214048.3	ENSMUSG00000070374.8	Olfr59	chr11	protein_coding	olfactory receptor 59
chr11	74174600	74179386	+	74174875	74179386	A5SS	0.33	50	50	ENSMUST00000214048.3	ENSMUSG00000070374.8	Olfr59	chr11	protein_coding	olfactory receptor 59
chr11	74174872	74179386	+	74174875	74179386	A5SS	0.33	50	50	ENSMUST00000214048.3	ENSMUSG00000070374.8	Olfr59	chr11	protein_coding	olfactory receptor 59
chr11	74174872	74179386	+	74174600	74179386	A5SS	0.33	50	50	ENSMUST00000143976.4	ENSMUSG00000070374.8	Olfr59	chr11	protein_coding	olfactory receptor 59
chr11	74226061	74228738	-	74226061	74228390	5pMXE	0.5	50	50	ENSMUST00000213831.2	ENSMUSG00000063116.5	Olfr410	chr11	protein_coding	olfactory receptor 410
chr11	74238081	74243392	-	74238414	74243392	A3SS	0.5	50	50	ENSMUST00000214769.2	ENSMUSG00000054406.10	Olfr411	chr11	protein_coding	olfactory receptor 411
chr11	74328289	74332576	-	74328289;74329134	74329090;74332576	ES	0.5	50	50	ENSMUST00000102521.9	ENSMUSG00000038807.20	Rap1gap2	chr11	protein_coding	RAP1 GTPase activating protein 2
chr11	74458077	74487708	-	74458077	74480786	5pMXE	0.33	50	50	ENSMUST00000102521.9	ENSMUSG00000038807.20	Rap1gap2	chr11	protein_coding	RAP1 GTPase activating protein 2
chr11	74283167	74283871	-	74283172	74283871	A3SS	0.5	50	50	ENSMUST00000102521.9	ENSMUSG00000038807.20	Rap1gap2	chr11	protein_coding	RAP1 GTPase activating protein 2
chr11	74375797	74413226	-	74375797	74458042	A5SS	0.5	50	50	ENSMUST00000102521.9	ENSMUSG00000038807.20	Rap1gap2	chr11	protein_coding	RAP1 GTPase activating protein 2
chr11	74458077	74480785	-	74458077	74487708	A5SS	0.33	50	50	ENSMUST00000238457.2	ENSMUSG00000038807.20	Rap1gap2	chr11	protein_coding	RAP1 GTPase activating protein 2
chr11	74458077	74480786	-	74458077	74480785	A5SS	0.33	50	50	ENSMUST00000145524.2	ENSMUSG00000038807.20	Rap1gap2	chr11	protein_coding	RAP1 GTPase activating protein 2
chr11	74540520	74547249	+	74540520;74541004	74540916;74547249	ES	0.33	50	50	ENSMUST00000130398.2	ENSMUSG00000020741.18	Cluh	chr11	protein_coding	clustered mitochondria (cluA/CLU1) homolog
chr11	74540944	74547249	+	74541004	74547249	A5SS	0.33	50	50	ENSMUST00000130398.2	ENSMUSG00000020741.18	Cluh	chr11	protein_coding	clustered mitochondria (cluA/CLU1) homolog
chr11	74540520;74540944	74540916;74547249	+	74540520	74547249	cassetteExon	0.5	100	100	ENSMUST00000117818.2	ENSMUSG00000020741.18	Cluh	chr11	protein_coding	clustered mitochondria (cluA/CLU1) homolog
chr11	74554957;74555752	74555600;74555833	+	74554957	74555833	cassetteExon	0.5	100	100	ENSMUST00000117818.2	ENSMUSG00000020741.18	Cluh	chr11	protein_coding	clustered mitochondria (cluA/CLU1) homolog
chr11	74556892	74556981	+	74556902	74556981	A5SS	0.5	50	50	ENSMUST00000117818.2	ENSMUSG00000020741.18	Cluh	chr11	protein_coding	clustered mitochondria (cluA/CLU1) homolog
chr11	74554957	74555833	+	74555752	74555833	A5SS	0.5	50	50	ENSMUST00000155558.8	ENSMUSG00000020741.18	Cluh	chr11	protein_coding	clustered mitochondria (cluA/CLU1) homolog
chr11	74540520	74547249	+	74540944	74547249	5pMXE	0.33	50	50	ENSMUST00000127679.2	ENSMUSG00000020741.18	Cluh	chr11	protein_coding	clustered mitochondria (cluA/CLU1) homolog
chr11	74590346	74613942	-	74590346	74614825	A5SS	0.33	50	50	ENSMUST00000126341.8	ENSMUSG00000020745.16	Pafah1b1	chr11	protein_coding	platelet-activating factor acetylhydrolase, isoform 1b, subunit 1
chr11	74590346	74614026	-	74590346	74614825	A5SS	0.33	50	50	ENSMUST00000126341.8	ENSMUSG00000020745.16	Pafah1b1	chr11	protein_coding	platelet-activating factor acetylhydrolase, isoform 1b, subunit 1
chr11	74590346	74613942	-	74590346	74614026	A5SS	0.33	50	50	ENSMUST00000102520.9	ENSMUSG00000020745.16	Pafah1b1	chr11	protein_coding	platelet-activating factor acetylhydrolase, isoform 1b, subunit 1
chr11	74686950	74694657	+	74686950;74693838	74693719;74694657	ES	0.33	50	50	ENSMUST00000010698.13	ENSMUSG00000010554.15	Mettl16	chr11	protein_coding	methyltransferase like 16
chr11	74683144;74686643	74686578;74686808	+	74683144	74686808	cassetteExon	0.5	100	100	ENSMUST00000010698.13	ENSMUSG00000010554.15	Mettl16	chr11	protein_coding	methyltransferase like 16
chr11	74686950;74691281	74691152;74694657	+	74686950;74693838	74693719;74694657	MXE	0.5	100	100	ENSMUST00000010698.13	ENSMUSG00000010554.15	Mettl16	chr11	protein_coding	methyltransferase like 16
chr11	74662091	74664348	+	74661810	74664348	A5SS	0.5	50	50	ENSMUST00000010698.13	ENSMUSG00000010554.15	Mettl16	chr11	protein_coding	methyltransferase like 16
chr11	74699483	74707696	+	74696168	74707696	A5SS	0.5	50	50	ENSMUST00000010698.13	ENSMUSG00000010554.15	Mettl16	chr11	protein_coding	methyltransferase like 16
chr11	74686950;74691281	74691152;74694657	+	74686950	74694657	cassetteExon	0.5	100	100	ENSMUST00000141755.8	ENSMUSG00000010554.15	Mettl16	chr11	protein_coding	methyltransferase like 16
chr11	74750725;74754520	74754386;74755911	-	74750725	74755911	cassetteExon	0.5	100	100	ENSMUST00000057631.12	ENSMUSG00000038351.15	Sgsm2	chr11	protein_coding	small G protein signaling modulator 2
chr11	74759117	74759468	-	74759117	74759403	A5SS	0.5	50	50	ENSMUST00000057631.12	ENSMUSG00000038351.15	Sgsm2	chr11	protein_coding	small G protein signaling modulator 2
chr11	74794839	74796032	+	74794839	74795655	3pMXE	0.5	50	50	ENSMUST00000155702.8	ENSMUSG00000038335.14	Tsr1	chr11	protein_coding	TSR1 20S rRNA accumulation
chr11	74789041;74789306	74789203;74790008	+	74789041	74790008	cassetteExon	0.5	100	100	ENSMUST00000155702.8	ENSMUSG00000038335.14	Tsr1	chr11	protein_coding	TSR1 20S rRNA accumulation
chr11	74790058	74790335	+	74790227	74790335	A5SS	0.5	50	50	ENSMUST00000155702.8	ENSMUSG00000038335.14	Tsr1	chr11	protein_coding	TSR1 20S rRNA accumulation
chr11	74794839	74796032	+	74794839;74795817	74795655;74796032	ES	0.5	50	50	ENSMUST00000045807.14	ENSMUSG00000038335.14	Tsr1	chr11	protein_coding	TSR1 20S rRNA accumulation
chr11	74800031	74801027	-	74800031;74800594	74800520;74801027	ES	0.5	50	50	ENSMUST00000065211.9	ENSMUSG00000001323.18	Srr	chr11	protein_coding	serine racemase
chr11	74803959	74816445	-	74803959;74810488	74810263;74816445	ES	0.33	50	50	ENSMUST00000065211.9	ENSMUSG00000001323.18	Srr	chr11	protein_coding	serine racemase
chr11	74803958	74810263	-	74803959	74810263	A3SS	0.5	50	50	ENSMUST00000065211.9	ENSMUSG00000001323.18	Srr	chr11	protein_coding	serine racemase
chr11	74803958	74816445	-	74810488	74816445	A3SS&ES	0.33	50	50	ENSMUST00000065211.9	ENSMUSG00000001323.18	Srr	chr11	protein_coding	serine racemase
chr11	74801146	74816410	-	74801146	74801869	A5SS&ES	0.5	50	50	ENSMUST00000065211.9	ENSMUSG00000001323.18	Srr	chr11	protein_coding	serine racemase
chr11	74810488	74816410	-	74810488	74816445	A5SS	0.33	50	50	ENSMUST00000065211.9	ENSMUSG00000001323.18	Srr	chr11	protein_coding	serine racemase
chr11	74810488	74816430	-	74810488	74816445	A5SS	0.33	50	50	ENSMUST00000065211.9	ENSMUSG00000001323.18	Srr	chr11	protein_coding	serine racemase
chr11	74803958	74816410	-	74801146	74816410	A3SS	0.33	50	50	ENSMUST00000127499.2	ENSMUSG00000001323.18	Srr	chr11	protein_coding	serine racemase
chr11	74810488	74816410	-	74801146	74816410	A3SS	0.33	50	50	ENSMUST00000127499.2	ENSMUSG00000001323.18	Srr	chr11	protein_coding	serine racemase
chr11	74803958	74816445	-	74803958;74810488	74810263;74816445	ES	0.33	50	50	ENSMUST00000108448.8	ENSMUSG00000001323.18	Srr	chr11	protein_coding	serine racemase
chr11	74803958	74816410	-	74803958	74810263	A5SS&ES	0.33	50	50	ENSMUST00000108448.8	ENSMUSG00000001323.18	Srr	chr11	protein_coding	serine racemase
chr11	74803958	74816445	-	74803959	74816445	A3SS	0.33	50	50	ENSMUST00000121738.8	ENSMUSG00000001323.18	Srr	chr11	protein_coding	serine racemase
chr11	74800031	74801027	-	74800594	74801027	3pMXE	0.5	50	50	ENSMUST00000128556.8	ENSMUSG00000001323.18	Srr	chr11	protein_coding	serine racemase
chr11	74803958	74816410	-	74803958;74810488	74810263;74816410	ES	0.33	50	50	ENSMUST00000128556.8	ENSMUSG00000001323.18	Srr	chr11	protein_coding	serine racemase
chr11	74803958	74816445	-	74803958	74810263	A5SS&ES	0.33	50	50	ENSMUST00000128556.8	ENSMUSG00000001323.18	Srr	chr11	protein_coding	serine racemase
chr11	74810488	74816430	-	74810488	74816410	A5SS	0.33	50	50	ENSMUST00000128556.8	ENSMUSG00000001323.18	Srr	chr11	protein_coding	serine racemase
chr11	74803958	74816445	-	74803958	74816410	A5SS	0.33	50	50	ENSMUST00000123855.8	ENSMUSG00000001323.18	Srr	chr11	protein_coding	serine racemase
chr11	74803959	74816445	-	74803959	74810263	A5SS&ES	0.5	50	50	ENSMUST00000138612.2	ENSMUSG00000001323.18	Srr	chr11	protein_coding	serine racemase
chr11	74837045	74880896	+	74837045;74872739	74872678;74880896	ES	0.33	50	50	ENSMUST00000045281.13	ENSMUSG00000038290.16	Smg6	chr11	protein_coding	Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)
chr11	74880249	74880896	+	74872739	74880896	A5SS	0.33	50	50	ENSMUST00000045281.13	ENSMUSG00000038290.16	Smg6	chr11	protein_coding	Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)
chr11	74884727	74929439	+	74881041	74929439	A5SS	0.5	50	50	ENSMUST00000045281.13	ENSMUSG00000038290.16	Smg6	chr11	protein_coding	Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)
chr11	75023570	75030019	+	74944789	75030019	A5SS	0.5	50	50	ENSMUST00000045281.13	ENSMUSG00000038290.16	Smg6	chr11	protein_coding	Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)
chr11	74880249	74880896	+	74837045	74880896	A5SS	0.33	50	50	ENSMUST00000130145.8	ENSMUSG00000038290.16	Smg6	chr11	protein_coding	Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)
chr11	75058370	75058720	-	75058370	75059829	A5SS	0.5	50	50	ENSMUST00000055619.5	ENSMUSG00000043099.5	Hic1	chr11	protein_coding	hypermethylated in cancer 1
chr11	75069213	75069751	-	75069213	75069438	5pMXE	0.33	50	50	ENSMUST00000071562.3	ENSMUSG00000038268.5	Ovca2	chr11	protein_coding	candidate tumor suppressor in ovarian cancer 2
chr11	75069213	75069456	-	75069213	75069438	A5SS	0.33	50	50	ENSMUST00000071562.3	ENSMUSG00000038268.5	Ovca2	chr11	protein_coding	candidate tumor suppressor in ovarian cancer 2
chr11	75069213	75069751	-	75069213	75069456	5pMXE	0.33	50	50	ENSMUST00000123489.2	ENSMUSG00000038268.5	Ovca2	chr11	protein_coding	candidate tumor suppressor in ovarian cancer 2
chr11	75071487	75072119	-	75071487;75071770	75071614;75072119	ES	0.5	50	50	ENSMUST00000044949.11	ENSMUSG00000078789.10	Dph1	chr11	protein_coding	diphthamide biosynthesis 1
chr11	75076941	75081999	-	75076941	75081225	5pMXE	0.5	50	50	ENSMUST00000044949.11	ENSMUSG00000078789.10	Dph1	chr11	protein_coding	diphthamide biosynthesis 1
chr11	75071515	75071614	-	75071487	75071614	A3SS	0.5	50	50	ENSMUST00000044949.11	ENSMUSG00000078789.10	Dph1	chr11	protein_coding	diphthamide biosynthesis 1
chr11	75071487	75072119	-	75071770	75072119	A3SS&ES	0.5	50	50	ENSMUST00000150910.8	ENSMUSG00000078789.10	Dph1	chr11	protein_coding	diphthamide biosynthesis 1
chr11	75201091;75202980	75202774;75203126	-	75201091	75203126	cassetteExon	0.5	100	100	ENSMUST00000092907.12	ENSMUSG00000000751.14	Rpa1	chr11	protein_coding	replication protein A1
chr11	75219587;75230601	75230539;75231116	-	75219587	75231116	cassetteExon	0.5	100	100	ENSMUST00000092907.12	ENSMUSG00000000751.14	Rpa1	chr11	protein_coding	replication protein A1
chr11	75305950	75307056	-	75305950;75306556	75306401;75307056	ES	0.5	50	50	ENSMUST00000000769.14	ENSMUSG00000000753.16	Serpinf1	chr11	protein_coding	serine (or cysteine) peptidase inhibitor, clade F, member 1
chr11	75308822;75309272	75309223;75313322	-	75308822	75313322	cassetteExon	0.5	100	100	ENSMUST00000000769.14	ENSMUSG00000000753.16	Serpinf1	chr11	protein_coding	serine (or cysteine) peptidase inhibitor, clade F, member 1
chr11	75304870	75305747	-	75304875	75305747	A3SS	0.5	50	50	ENSMUST00000000769.14	ENSMUSG00000000753.16	Serpinf1	chr11	protein_coding	serine (or cysteine) peptidase inhibitor, clade F, member 1
chr11	75305950;75307254	75307056;75308735	-	75305950	75308735	cassetteExon	0.5	100	100	ENSMUST00000168902.8	ENSMUSG00000000753.16	Serpinf1	chr11	protein_coding	serine (or cysteine) peptidase inhibitor, clade F, member 1
chr11	75305950	75306401	-	75305950	75308735	A5SS	0.33	50	50	ENSMUST00000168902.8	ENSMUSG00000000753.16	Serpinf1	chr11	protein_coding	serine (or cysteine) peptidase inhibitor, clade F, member 1
chr11	75305950	75307056	-	75305950	75306401	5pMXE	0.33	50	50	ENSMUST00000167281.8	ENSMUSG00000000753.16	Serpinf1	chr11	protein_coding	serine (or cysteine) peptidase inhibitor, clade F, member 1
chr11	75305950	75307056	-	75306556	75307056	3pMXE	0.5	50	50	ENSMUST00000125982.2	ENSMUSG00000000753.16	Serpinf1	chr11	protein_coding	serine (or cysteine) peptidase inhibitor, clade F, member 1
chr11	75305950	75308735	-	75307254	75308735	3pMXE	0.5	50	50	ENSMUST00000155009.2	ENSMUSG00000000753.16	Serpinf1	chr11	protein_coding	serine (or cysteine) peptidase inhibitor, clade F, member 1
chr11	75329284	75330283	-	75329284	75329699	5pMXE	0.5	50	50	ENSMUST00000108437.8	ENSMUSG00000038224.13	Serpinf2	chr11	protein_coding	serine (or cysteine) peptidase inhibitor, clade F, member 2
chr11	75328381	75328854	-	75328381	75328864	A5SS	0.5	50	50	ENSMUST00000108437.8	ENSMUSG00000038224.13	Serpinf2	chr11	protein_coding	serine (or cysteine) peptidase inhibitor, clade F, member 2
chr11	75332915	75335524	-	75332915;75335260	75335081;75335524	ES	0.5	50	50	ENSMUST00000173320.8	ENSMUSG00000045374.19	Wdr81	chr11	protein_coding	WD repeat domain 81
chr11	75340362	75340477	-	75340362	75340622	A5SS	0.5	50	50	ENSMUST00000173320.8	ENSMUSG00000045374.19	Wdr81	chr11	protein_coding	WD repeat domain 81
chr11	75354683	75359383	+	75354683	75356133	3pMXE	0.5	50	50	ENSMUST00000149940.2	ENSMUSG00000085148.2	Mir22hg	chr11	lncRNA	Mir22 host gene (non-protein coding)
chr11	75359750	75360299	+	75359750	75360298	A3SS	0.5	50	50	ENSMUST00000124718.8	ENSMUSG00000038217.14	Tlcd2	chr11	protein_coding	TLC domain containing 2
chr11	75359203	75359383	+	75354683	75359383	A5SS	0.5	50	50	ENSMUST00000124718.8	ENSMUSG00000038217.14	Tlcd2	chr11	protein_coding	TLC domain containing 2
chr11	75359569	75359668	+	75359465	75359668	A5SS	0.5	50	50	ENSMUST00000124718.8	ENSMUSG00000038217.14	Tlcd2	chr11	protein_coding	TLC domain containing 2
chr11	75360444	75361226	+	75360727	75361226	A5SS	0.5	50	50	ENSMUST00000043598.14	ENSMUSG00000038217.14	Tlcd2	chr11	protein_coding	TLC domain containing 2
chr11	75378619	75380824	+	75378619;75380732	75380568;75380824	ES	0.5	50	50	ENSMUST00000018449.11	ENSMUSG00000020850.15	Prpf8	chr11	protein_coding	pre-mRNA processing factor 8
chr11	75404516	75405135	+	75404516;75404889	75404831;75405135	ES	0.5	50	50	ENSMUST00000042808.13	ENSMUSG00000038188.18	Scarf1	chr11	protein_coding	scavenger receptor class F, member 1
chr11	75413122;75414963	75414601;75416196	+	75413122	75416196	cassetteExon	0.5	100	100	ENSMUST00000118243.2	ENSMUSG00000038188.18	Scarf1	chr11	protein_coding	scavenger receptor class F, member 1
chr11	75422567	75423414	+	75422648	75423414	A5SS	0.2	50	50	ENSMUST00000149727.8	ENSMUSG00000038178.17	Slc43a2	chr11	protein_coding	solute carrier family 43, member 2
chr11	75422604	75423414	+	75422648	75423414	A5SS	0.2	50	50	ENSMUST00000149727.8	ENSMUSG00000038178.17	Slc43a2	chr11	protein_coding	solute carrier family 43, member 2
chr11	75423034	75423414	+	75422648	75423414	A5SS	0.2	50	50	ENSMUST00000149727.8	ENSMUSG00000038178.17	Slc43a2	chr11	protein_coding	solute carrier family 43, member 2
chr11	75423240	75423414	+	75422648	75423414	A5SS	0.2	50	50	ENSMUST00000149727.8	ENSMUSG00000038178.17	Slc43a2	chr11	protein_coding	solute carrier family 43, member 2
chr11	75428930	75433984	+	75423614	75433984	A5SS	0.5	50	50	ENSMUST00000149727.8	ENSMUSG00000038178.17	Slc43a2	chr11	protein_coding	solute carrier family 43, member 2
chr11	75459316	75459402	+	75459316	75461397	A3SS	0.5	50	50	ENSMUST00000108433.8	ENSMUSG00000038178.17	Slc43a2	chr11	protein_coding	solute carrier family 43, member 2
chr11	75422567	75423414	+	75422604	75423414	A5SS	0.2	50	50	ENSMUST00000108433.8	ENSMUSG00000038178.17	Slc43a2	chr11	protein_coding	solute carrier family 43, member 2
chr11	75423034	75423414	+	75422604	75423414	A5SS	0.2	50	50	ENSMUST00000108433.8	ENSMUSG00000038178.17	Slc43a2	chr11	protein_coding	solute carrier family 43, member 2
chr11	75423240	75423414	+	75422604	75423414	A5SS	0.2	50	50	ENSMUST00000108433.8	ENSMUSG00000038178.17	Slc43a2	chr11	protein_coding	solute carrier family 43, member 2
chr11	75457241	75457805	+	75454534	75457805	A5SS	0.33	50	50	ENSMUST00000108433.8	ENSMUSG00000038178.17	Slc43a2	chr11	protein_coding	solute carrier family 43, member 2
chr11	75457671	75457805	+	75454534	75457805	A5SS	0.33	50	50	ENSMUST00000108433.8	ENSMUSG00000038178.17	Slc43a2	chr11	protein_coding	solute carrier family 43, member 2
chr11	75423034	75423414	+	75422567	75423414	A5SS	0.2	50	50	ENSMUST00000042561.14	ENSMUSG00000038178.17	Slc43a2	chr11	protein_coding	solute carrier family 43, member 2
chr11	75423240	75423414	+	75422567	75423414	A5SS	0.2	50	50	ENSMUST00000042561.14	ENSMUSG00000038178.17	Slc43a2	chr11	protein_coding	solute carrier family 43, member 2
chr11	75423034	75423414	+	75423240	75423414	A5SS	0.2	50	50	ENSMUST00000143035.8	ENSMUSG00000038178.17	Slc43a2	chr11	protein_coding	solute carrier family 43, member 2
chr11	75457671	75457805	+	75457241	75457805	A5SS	0.33	50	50	ENSMUST00000145901.8	ENSMUSG00000038178.17	Slc43a2	chr11	protein_coding	solute carrier family 43, member 2
chr11	75494306;75494561	75494551;75499931	+	75494306;75498940	75498933;75499931	MXE	0.5	100	100	ENSMUST00000143219.8	ENSMUSG00000017781.18	Pitpna	chr11	protein_coding	phosphatidylinositol transfer protein, alpha
chr11	75494315	75499931	+	75498940	75499931	A5SS&ES	0.33	50	50	ENSMUST00000143219.8	ENSMUSG00000017781.18	Pitpna	chr11	protein_coding	phosphatidylinositol transfer protein, alpha
chr11	75511624	75516291	+	75511202	75516291	A5SS	0.5	50	50	ENSMUST00000143219.8	ENSMUSG00000017781.18	Pitpna	chr11	protein_coding	phosphatidylinositol transfer protein, alpha
chr11	75494315	75499931	+	75494561	75499931	A5SS&ES	0.33	50	50	ENSMUST00000179521.8	ENSMUSG00000017781.18	Pitpna	chr11	protein_coding	phosphatidylinositol transfer protein, alpha
chr11	75494306	75503046	+	75500005	75503046	A5SS&ES	0.5	50	50	ENSMUST00000179445.8	ENSMUSG00000017781.18	Pitpna	chr11	protein_coding	phosphatidylinositol transfer protein, alpha
chr11	75494306	75494551	+	75494306	75503046	A3SS	0.33	50	50	ENSMUST00000102509.11	ENSMUSG00000017781.18	Pitpna	chr11	protein_coding	phosphatidylinositol transfer protein, alpha
chr11	75494306	75498933	+	75494306	75503046	A3SS	0.33	50	50	ENSMUST00000102509.11	ENSMUSG00000017781.18	Pitpna	chr11	protein_coding	phosphatidylinositol transfer protein, alpha
chr11	75522023	75523930	+	75522023	75523895	A3SS	0.5	50	50	ENSMUST00000006286.9	ENSMUSG00000006127.10	Inpp5k	chr11	protein_coding	inositol polyphosphate 5-phosphatase K
chr11	75527886	75528044	+	75527886	75528236	A3SS	0.5	50	50	ENSMUST00000006286.9	ENSMUSG00000006127.10	Inpp5k	chr11	protein_coding	inositol polyphosphate 5-phosphatase K
chr11	75537761	75538019	+	75537749	75538019	A5SS	0.5	50	50	ENSMUST00000006286.9	ENSMUSG00000006127.10	Inpp5k	chr11	protein_coding	inositol polyphosphate 5-phosphatase K
chr11	75542491	75548318	+	75541590	75548318	A5SS	0.2	50	50	ENSMUST00000102505.10	ENSMUSG00000017774.20	Myo1c	chr11	protein_coding	myosin IC
chr11	75543169	75548318	+	75541590	75548318	A5SS	0.2	50	50	ENSMUST00000102505.10	ENSMUSG00000017774.20	Myo1c	chr11	protein_coding	myosin IC
chr11	75547027	75548318	+	75541590	75548318	A5SS	0.2	50	50	ENSMUST00000102505.10	ENSMUSG00000017774.20	Myo1c	chr11	protein_coding	myosin IC
chr11	75547217	75548318	+	75541590	75548318	A5SS	0.2	50	50	ENSMUST00000102505.10	ENSMUSG00000017774.20	Myo1c	chr11	protein_coding	myosin IC
chr11	75543169	75548318	+	75542491	75548318	A5SS	0.2	50	50	ENSMUST00000069057.13	ENSMUSG00000017774.20	Myo1c	chr11	protein_coding	myosin IC
chr11	75547027	75548318	+	75542491	75548318	A5SS	0.2	50	50	ENSMUST00000069057.13	ENSMUSG00000017774.20	Myo1c	chr11	protein_coding	myosin IC
chr11	75547217	75548318	+	75542491	75548318	A5SS	0.2	50	50	ENSMUST00000069057.13	ENSMUSG00000017774.20	Myo1c	chr11	protein_coding	myosin IC
chr11	75547027	75548318	+	75543169	75548318	A5SS	0.2	50	50	ENSMUST00000102504.10	ENSMUSG00000017774.20	Myo1c	chr11	protein_coding	myosin IC
chr11	75547217	75548318	+	75543169	75548318	A5SS	0.2	50	50	ENSMUST00000102504.10	ENSMUSG00000017774.20	Myo1c	chr11	protein_coding	myosin IC
chr11	75547217	75548318	+	75547027	75548318	A5SS	0.2	50	50	ENSMUST00000108431.3	ENSMUSG00000017774.20	Myo1c	chr11	protein_coding	myosin IC
chr11	75570490	75594192	+	75570490;75583558	75583023;75594192	ES	0.33	50	50	ENSMUST00000017920.14	ENSMUSG00000017776.16	Crk	chr11	protein_coding	v-crk avian sarcoma virus CT10 oncogene homolog
chr11	75583558	75591371	+	75583558	75594192	A3SS	0.5	50	50	ENSMUST00000017920.14	ENSMUSG00000017776.16	Crk	chr11	protein_coding	v-crk avian sarcoma virus CT10 oncogene homolog
chr11	75583388	75594192	+	75583558	75594192	A5SS	0.33	50	50	ENSMUST00000017920.14	ENSMUSG00000017776.16	Crk	chr11	protein_coding	v-crk avian sarcoma virus CT10 oncogene homolog
chr11	75570490;75583388	75583023;75594192	+	75570490	75594192	cassetteExon	0.5	100	100	ENSMUST00000108426.8	ENSMUSG00000017776.16	Crk	chr11	protein_coding	v-crk avian sarcoma virus CT10 oncogene homolog
chr11	75583558	75594192	+	75570490	75594192	A5SS	0.33	50	50	ENSMUST00000108426.8	ENSMUSG00000017776.16	Crk	chr11	protein_coding	v-crk avian sarcoma virus CT10 oncogene homolog
chr11	75583388	75591371	+	75583388	75594192	A3SS	0.5	50	50	ENSMUST00000108425.8	ENSMUSG00000017776.16	Crk	chr11	protein_coding	v-crk avian sarcoma virus CT10 oncogene homolog
chr11	75583558	75591371	+	75583388	75591371	A5SS	0.5	50	50	ENSMUST00000093115.4	ENSMUSG00000017776.16	Crk	chr11	protein_coding	v-crk avian sarcoma virus CT10 oncogene homolog
chr11	75624071	75642707	+	75623917	75642707	A5SS	0.5	50	50	ENSMUST00000067664.10	ENSMUSG00000020849.14	Ywhae	chr11	protein_coding	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
chr11	75646478	75650118	+	75647849	75650118	A5SS&ES	0.5	50	50	ENSMUST00000067664.10	ENSMUSG00000020849.14	Ywhae	chr11	protein_coding	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
chr11	75686180	75686635	+	75685643	75686635	A5SS	0.5	50	50	ENSMUST00000127424.8	ENSMUSG00000087059.8	Gm12339	chr11	lncRNA	predicted gene 12339
chr11	75686944	75714729	+	75686944	75715988	A3SS	0.5	50	50	ENSMUST00000139361.2	ENSMUSG00000087059.8	Gm12339	chr11	lncRNA	predicted gene 12339
chr11	75715371	75715988	+	75686944	75715988	A5SS	0.5	50	50	ENSMUST00000139361.2	ENSMUSG00000087059.8	Gm12339	chr11	lncRNA	predicted gene 12339
chr11	75801885	75829075	-	75801885	75828489	5pMXE	0.25	50	50	ENSMUST00000121287.8	ENSMUSG00000020847.16	Rph3al	chr11	protein_coding	rabphilin 3A-like (without C2 domains)
chr11	75801885;75802557	75802433;75828489	-	75801885	75828489	cassetteExon	0.5	100	100	ENSMUST00000121287.8	ENSMUSG00000020847.16	Rph3al	chr11	protein_coding	rabphilin 3A-like (without C2 domains)
chr11	75791719	75797344	-	75769861	75797344	A3SS	0.5	50	50	ENSMUST00000121287.8	ENSMUSG00000020847.16	Rph3al	chr11	protein_coding	rabphilin 3A-like (without C2 domains)
chr11	75801885	75816580	-	75801885	75828489	A5SS	0.25	50	50	ENSMUST00000121287.8	ENSMUSG00000020847.16	Rph3al	chr11	protein_coding	rabphilin 3A-like (without C2 domains)
chr11	75801885	75829075	-	75801885	75816580	5pMXE	0.25	50	50	ENSMUST00000021208.11	ENSMUSG00000020847.16	Rph3al	chr11	protein_coding	rabphilin 3A-like (without C2 domains)
chr11	75801885	75802433	-	75801885	75816580	A5SS	0.25	50	50	ENSMUST00000021208.11	ENSMUSG00000020847.16	Rph3al	chr11	protein_coding	rabphilin 3A-like (without C2 domains)
chr11	75801885	75802433	-	75801885	75829075	A5SS	0.25	50	50	ENSMUST00000152035.2	ENSMUSG00000020847.16	Rph3al	chr11	protein_coding	rabphilin 3A-like (without C2 domains)
chr11	76008027	76012344	-	76008027;76008631	76008488;76012344	ES	0.33	50	50	ENSMUST00000056601.11	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	76027140	76054624	-	76027140;76029220	76029134;76054624	ES	0.33	50	50	ENSMUST00000056601.11	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	76004903	76007885	-	76004908	76007885	A3SS	0.5	50	50	ENSMUST00000056601.11	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	76061536	76065453	-	76057074	76065453	A3SS	0.33	50	50	ENSMUST00000056601.11	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	76068208	76070239	-	76065533	76070239	A3SS	0.33	50	50	ENSMUST00000056601.11	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	75967339	75967919	-	75967339	75967866	A5SS	0.5	50	50	ENSMUST00000056601.11	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	76008631	76012338	-	76008631	76012344	A5SS	0.5	50	50	ENSMUST00000056601.11	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	76029220	76029441	-	76029220	76054624	A5SS	0.2	50	50	ENSMUST00000056601.11	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	76029220	76045735	-	76029220	76054624	A5SS	0.2	50	50	ENSMUST00000056601.11	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	76029220	76054628	-	76029220	76054624	A5SS	0.2	50	50	ENSMUST00000056601.11	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	76065533	76066444	-	76065533	76070239	A5SS	0.5	50	50	ENSMUST00000056601.11	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	75983141;75992914	75992813;76054624	-	75983141;76029220	76012344;76054624	MXE	0.5	100	100	ENSMUST00000108419.9	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	76008027	76012344	-	75983141	76012344	A3SS	0.33	50	50	ENSMUST00000108419.9	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	76008631	76012344	-	75983141	76012344	A3SS	0.33	50	50	ENSMUST00000108419.9	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	76027140;76029220	76029134;76065453	-	76027140;76057074	76054624;76065453	MXE	0.5	100	100	ENSMUST00000094015.11	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	76025354	76070239	-	76065533	76070239	A3SS&ES	0.33	50	50	ENSMUST00000167114.8	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	76027140	76054624	-	75992914	76054624	A3SS	0.33	50	50	ENSMUST00000167114.8	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	76029220	76054624	-	75992914	76054624	A3SS	0.33	50	50	ENSMUST00000167114.8	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	76029220	76065453	-	76057074	76065453	A3SS&ES	0.33	50	50	ENSMUST00000167114.8	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	75983141	76012344	-	75983141	75992813	A5SS&ES	0.5	50	50	ENSMUST00000167114.8	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	75992914	76004767	-	75992914	76054624	A5SS	0.5	50	50	ENSMUST00000167114.8	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	76068208	76070239	-	76025354	76070239	A3SS	0.33	50	50	ENSMUST00000163878.2	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	76025354	76027025	-	76025354	76070239	A5SS	0.5	50	50	ENSMUST00000163878.2	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	76027140	76054624	-	76027140	76029134	A5SS&ES	0.5	50	50	ENSMUST00000166084.8	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	76029220	76029441	-	76029220	76054628	A5SS	0.2	50	50	ENSMUST00000166084.8	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	76029220	76045735	-	76029220	76054628	A5SS	0.2	50	50	ENSMUST00000166084.8	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	76029220	76045735	-	76029220	76029441	5pMXE	0.2	50	50	ENSMUST00000141773.8	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	76029220	76065453	-	76029220	76029441	5pMXE	0.2	50	50	ENSMUST00000141773.8	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	76029220	76065453	-	76029220	76045735	5pMXE	0.2	50	50	ENSMUST00000143459.2	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	76061536	76065453	-	76029220	76065453	A3SS	0.33	50	50	ENSMUST00000170730.3	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	76029220	76054624	-	76029220	76065453	A5SS	0.2	50	50	ENSMUST00000170730.3	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	76029220	76054628	-	76029220	76065453	A5SS	0.2	50	50	ENSMUST00000170730.3	ENSMUSG00000017288.16	Vps53	chr11	protein_coding	VPS53 GARP complex subunit
chr11	76128639	76131699	-	76128639;76130398	76130278;76131699	ES	0.33	50	50	ENSMUST00000169532.8	ENSMUSG00000017286.16	Glod4	chr11	protein_coding	glyoxalase domain containing 4
chr11	76104749	76123848	-	76012422	76123848	A3SS	0.33	50	50	ENSMUST00000169532.8	ENSMUSG00000017286.16	Glod4	chr11	protein_coding	glyoxalase domain containing 4
chr11	76112857	76123848	-	76012422	76123848	A3SS	0.33	50	50	ENSMUST00000169532.8	ENSMUSG00000017286.16	Glod4	chr11	protein_coding	glyoxalase domain containing 4
chr11	76130330	76131699	-	76130398	76131699	A3SS	0.33	50	50	ENSMUST00000169532.8	ENSMUSG00000017286.16	Glod4	chr11	protein_coding	glyoxalase domain containing 4
chr11	76012422	76025235	-	76012422	76123848	A5SS	0.5	50	50	ENSMUST00000169532.8	ENSMUSG00000017286.16	Glod4	chr11	protein_coding	glyoxalase domain containing 4
chr11	76131748	76133820	-	76131748	76134381	A5SS	0.25	50	50	ENSMUST00000169532.8	ENSMUSG00000017286.16	Glod4	chr11	protein_coding	glyoxalase domain containing 4
chr11	76131748	76134414	-	76131748	76134381	A5SS	0.25	50	50	ENSMUST00000169532.8	ENSMUSG00000017286.16	Glod4	chr11	protein_coding	glyoxalase domain containing 4
chr11	76131748	76134444	-	76131748	76134381	A5SS	0.25	50	50	ENSMUST00000169532.8	ENSMUSG00000017286.16	Glod4	chr11	protein_coding	glyoxalase domain containing 4
chr11	76112857	76123848	-	76104749	76123848	A3SS	0.33	50	50	ENSMUST00000169701.8	ENSMUSG00000017286.16	Glod4	chr11	protein_coding	glyoxalase domain containing 4
chr11	76104749	76108304	-	76104749	76123848	A5SS	0.5	50	50	ENSMUST00000169701.8	ENSMUSG00000017286.16	Glod4	chr11	protein_coding	glyoxalase domain containing 4
chr11	76128639	76131699	-	76128639;76130330	76130278;76131699	ES	0.33	50	50	ENSMUST00000170017.8	ENSMUSG00000017286.16	Glod4	chr11	protein_coding	glyoxalase domain containing 4
chr11	76131748	76134414	-	76131748	76133820	5pMXE	0.25	50	50	ENSMUST00000170710.8	ENSMUSG00000017286.16	Glod4	chr11	protein_coding	glyoxalase domain containing 4
chr11	76131748	76134444	-	76131748	76133820	5pMXE	0.25	50	50	ENSMUST00000170710.8	ENSMUSG00000017286.16	Glod4	chr11	protein_coding	glyoxalase domain containing 4
chr11	76131748	76134444	-	76131748	76134414	5pMXE	0.25	50	50	ENSMUST00000164022.8	ENSMUSG00000017286.16	Glod4	chr11	protein_coding	glyoxalase domain containing 4
chr11	76128639	76131699	-	76128639	76130278	5pMXE	0.5	50	50	ENSMUST00000167883.2	ENSMUSG00000017286.16	Glod4	chr11	protein_coding	glyoxalase domain containing 4
chr11	76096281	76098736	+	76096281;76098049	76097954;76098736	ES	0.5	50	50	ENSMUST00000129853.8	ENSMUSG00000069808.14	Tlcd3a	chr11	protein_coding	TLC domain containing 3A
chr11	76093081	76093378	+	76070812	76093378	A5SS	0.5	50	50	ENSMUST00000129853.8	ENSMUSG00000069808.14	Tlcd3a	chr11	protein_coding	TLC domain containing 3A
chr11	76093461	76096080	+	76093461	76101875	A3SS	0.5	50	50	ENSMUST00000127340.2	ENSMUSG00000069808.14	Tlcd3a	chr11	protein_coding	TLC domain containing 3A
chr11	76108098	76108304	-	76104749	76108304	A3SS	0.5	50	50	ENSMUST00000102500.5	ENSMUSG00000049396.7	Gemin4	chr11	protein_coding	gem nuclear organelle associated protein 4
chr11	76140101	76140721	+	76138340	76140721	A5SS	0.5	50	50	ENSMUST00000040577.5	ENSMUSG00000038046.5	Mrm3	chr11	protein_coding	mitochondrial rRNA methyltransferase 3
chr11	76250112	76289527	-	76169417	76289527	A3SS	0.5	50	50	ENSMUST00000021204.4	ENSMUSG00000020844.7	Nxn	chr11	protein_coding	nucleoredoxin
chr11	76298268	76300468	+	76297969	76300468	A5SS	0.33	50	50	ENSMUST00000120699.8	ENSMUSG00000020843.16	Timm22	chr11	protein_coding	translocase of inner mitochondrial membrane 22
chr11	76298268	76301953	+	76300664	76301953	A5SS&ES	0.5	50	50	ENSMUST00000120699.8	ENSMUSG00000020843.16	Timm22	chr11	protein_coding	translocase of inner mitochondrial membrane 22
chr11	76298443	76300468	+	76297969	76300468	A5SS	0.33	50	50	ENSMUST00000120699.8	ENSMUSG00000020843.16	Timm22	chr11	protein_coding	translocase of inner mitochondrial membrane 22
chr11	76298268	76301953	+	76298268;76300664	76300468;76301953	ES	0.5	50	50	ENSMUST00000021203.7	ENSMUSG00000020843.16	Timm22	chr11	protein_coding	translocase of inner mitochondrial membrane 22
chr11	76298443	76300468	+	76298268	76300468	A5SS	0.33	50	50	ENSMUST00000021203.7	ENSMUSG00000020843.16	Timm22	chr11	protein_coding	translocase of inner mitochondrial membrane 22
chr11	76350098	76352119	-	76350172	76352119	A3SS	0.5	50	50	ENSMUST00000094012.11	ENSMUSG00000017631.20	Abr	chr11	protein_coding	active BCR-related gene
chr11	76377146	76377264	-	76370006	76377264	A3SS	0.5	50	50	ENSMUST00000094012.11	ENSMUSG00000017631.20	Abr	chr11	protein_coding	active BCR-related gene
chr11	76316152	76327775	-	76316152	76342679	A5SS	0.5	50	50	ENSMUST00000094012.11	ENSMUSG00000017631.20	Abr	chr11	protein_coding	active BCR-related gene
chr11	76355116	76359081	-	76355116	76359542	A5SS	0.5	50	50	ENSMUST00000094012.11	ENSMUSG00000017631.20	Abr	chr11	protein_coding	active BCR-related gene
chr11	76377362	76384479	-	76377362	76399714	A5SS	0.33	50	50	ENSMUST00000094012.11	ENSMUSG00000017631.20	Abr	chr11	protein_coding	active BCR-related gene
chr11	76377362	76385083	-	76377362	76399714	A5SS	0.33	50	50	ENSMUST00000094012.11	ENSMUSG00000017631.20	Abr	chr11	protein_coding	active BCR-related gene
chr11	76399898	76468333	-	76399898	76461857	5pMXE	0.25	50	50	ENSMUST00000072740.13	ENSMUSG00000017631.20	Abr	chr11	protein_coding	active BCR-related gene
chr11	76399898	76504164	-	76399898	76461857	5pMXE	0.25	50	50	ENSMUST00000072740.13	ENSMUSG00000017631.20	Abr	chr11	protein_coding	active BCR-related gene
chr11	76399898	76513003	-	76399898	76461857	5pMXE	0.25	50	50	ENSMUST00000072740.13	ENSMUSG00000017631.20	Abr	chr11	protein_coding	active BCR-related gene
chr11	76399898	76468333	-	76399898	76513003	A5SS	0.25	50	50	ENSMUST00000238684.2	ENSMUSG00000017631.20	Abr	chr11	protein_coding	active BCR-related gene
chr11	76399898	76504164	-	76399898	76513003	A5SS	0.25	50	50	ENSMUST00000238684.2	ENSMUSG00000017631.20	Abr	chr11	protein_coding	active BCR-related gene
chr11	76377362	76384479	-	76377362	76385083	A5SS	0.33	50	50	ENSMUST00000108408.9	ENSMUSG00000017631.20	Abr	chr11	protein_coding	active BCR-related gene
chr11	76399898	76504164	-	76399898	76468333	5pMXE	0.25	50	50	ENSMUST00000176179.8	ENSMUSG00000017631.20	Abr	chr11	protein_coding	active BCR-related gene
chr11	76645626	76654346	-	76645626;76652181	76652061;76654346	ES	0.5	50	50	ENSMUST00000010536.9	ENSMUSG00000010392.9	Gosr1	chr11	protein_coding	golgi SNAP receptor complex member 1
chr11	76795472	76797941	+	76795472	76797739	A3SS	0.5	50	50	ENSMUST00000102495.8	ENSMUSG00000020839.17	Tmigd1	chr11	protein_coding	transmembrane and immunoglobulin domain containing 1
chr11	76837265	76841870	+	76837265;76840895	76840786;76841870	ES	0.33	50	50	ENSMUST00000140781.9	ENSMUSG00000020840.11	Blmh	chr11	protein_coding	bleomycin hydrolase
chr11	76836719	76837068	+	76815979	76837068	A5SS	0.33	50	50	ENSMUST00000140781.9	ENSMUSG00000020840.11	Blmh	chr11	protein_coding	bleomycin hydrolase
chr11	76836719	76841870	+	76840895	76841870	A5SS&ES	0.33	50	50	ENSMUST00000140781.9	ENSMUSG00000020840.11	Blmh	chr11	protein_coding	bleomycin hydrolase
chr11	76836940	76837068	+	76815979	76837068	A5SS	0.33	50	50	ENSMUST00000140781.9	ENSMUSG00000020840.11	Blmh	chr11	protein_coding	bleomycin hydrolase
chr11	76836940	76837068	+	76836719	76837068	A5SS	0.33	50	50	ENSMUST00000021197.10	ENSMUSG00000020840.11	Blmh	chr11	protein_coding	bleomycin hydrolase
chr11	76852902	76856641	+	76845428	76856641	A5SS	0.5	50	50	ENSMUST00000021197.10	ENSMUSG00000020840.11	Blmh	chr11	protein_coding	bleomycin hydrolase
chr11	76836719	76841870	+	76836719	76837068	3pMXE	0.5	50	50	ENSMUST00000155867.3	ENSMUSG00000020840.11	Blmh	chr11	protein_coding	bleomycin hydrolase
chr11	76837265	76841870	+	76837265	76840786	A3SS	0.5	50	50	ENSMUST00000140193.8	ENSMUSG00000020840.11	Blmh	chr11	protein_coding	bleomycin hydrolase
chr11	76836719;76837265	76837068;76841870	+	76836719	76841870	cassetteExon	0.5	100	100	ENSMUST00000125145.8	ENSMUSG00000020840.11	Blmh	chr11	protein_coding	bleomycin hydrolase
chr11	76889501	76901158	+	76889501;76892491	76892433;76901158	ES	0.33	50	50	ENSMUST00000108402.9	ENSMUSG00000020838.13	Slc6a4	chr11	protein_coding	solute carrier family 6 (neurotransmitter transporter, serotonin), member 4
chr11	76900157	76901158	+	76892491	76901158	A5SS	0.33	50	50	ENSMUST00000108402.9	ENSMUSG00000020838.13	Slc6a4	chr11	protein_coding	solute carrier family 6 (neurotransmitter transporter, serotonin), member 4
chr11	76900157	76901158	+	76889501	76901158	A5SS	0.33	50	50	ENSMUST00000021195.11	ENSMUSG00000020838.13	Slc6a4	chr11	protein_coding	solute carrier family 6 (neurotransmitter transporter, serotonin), member 4
chr11	76967570	76968800	-	76967570	76969205	A5SS	0.5	50	50	ENSMUST00000102494.8	ENSMUSG00000037958.14	Nsrp1	chr11	protein_coding	nuclear speckle regulatory protein 1
chr11	77042799	77054602	-	77042799	77063131	A5SS	0.5	50	50	ENSMUST00000108400.8	ENSMUSG00000050944.15	Efcab5	chr11	protein_coding	EF-hand calcium binding domain 5
chr11	76981317	77004434	-	76981317	76993620	5pMXE	0.5	50	50	ENSMUST00000151731.2	ENSMUSG00000050944.15	Efcab5	chr11	protein_coding	EF-hand calcium binding domain 5
chr11	76996268	77004434	-	76981317	77004434	A3SS	0.5	50	50	ENSMUST00000130901.2	ENSMUSG00000050944.15	Efcab5	chr11	protein_coding	EF-hand calcium binding domain 5
chr11	77107341	77218279	+	77107341;77169052	77168972;77218279	ES	0.5	50	50	ENSMUST00000156488.8	ENSMUSG00000037926.16	Ssh2	chr11	protein_coding	slingshot protein phosphatase 2
chr11	77239379	77283876	+	77218322	77283876	A5SS	0.5	50	50	ENSMUST00000156488.8	ENSMUSG00000037926.16	Ssh2	chr11	protein_coding	slingshot protein phosphatase 2
chr11	77299073	77303436	+	77299073	77307241	A3SS	0.33	50	50	ENSMUST00000037912.12	ENSMUSG00000037926.16	Ssh2	chr11	protein_coding	slingshot protein phosphatase 2
chr11	77299073	77307244	+	77299073	77307241	A3SS	0.33	50	50	ENSMUST00000037912.12	ENSMUSG00000037926.16	Ssh2	chr11	protein_coding	slingshot protein phosphatase 2
chr11	77299073	77307244	+	77299073	77303436	3pMXE	0.33	50	50	ENSMUST00000127890.9	ENSMUSG00000037926.16	Ssh2	chr11	protein_coding	slingshot protein phosphatase 2
chr11	77357425	77359092	+	77357425;77358695	77358576;77359092	ES	0.33	50	50	ENSMUST00000102493.8	ENSMUSG00000020836.16	Coro6	chr11	protein_coding	coronin 6
chr11	77353580;77354549	77354482;77354678	+	77353580	77354678	cassetteExon	0.5	100	100	ENSMUST00000102493.8	ENSMUSG00000020836.16	Coro6	chr11	protein_coding	coronin 6
chr11	77357425;77358169	77358050;77359092	+	77357425;77358695	77358576;77359092	MXE	0.5	100	100	ENSMUST00000102493.8	ENSMUSG00000020836.16	Coro6	chr11	protein_coding	coronin 6
chr11	77360113	77360202	+	77360113	77360205	A3SS	0.5	50	50	ENSMUST00000102493.8	ENSMUSG00000020836.16	Coro6	chr11	protein_coding	coronin 6
chr11	77357425;77358169	77358050;77359092	+	77357425	77359092	cassetteExon	0.5	100	100	ENSMUST00000052515.12	ENSMUSG00000020836.16	Coro6	chr11	protein_coding	coronin 6
chr11	77364026	77364107	-	77363994	77364107	A3SS	0.5	50	50	ENSMUST00000145934.8	ENSMUSG00000037907.17	Ankrd13b	chr11	protein_coding	ankyrin repeat domain 13b
chr11	77363005	77363128	-	77362649	77363128	A3SS	0.5	50	50	ENSMUST00000037593.14	ENSMUSG00000037907.17	Ankrd13b	chr11	protein_coding	ankyrin repeat domain 13b
chr11	77391940	77393844	+	77391940;77393681	77393655;77393844	ES	0.5	50	50	ENSMUST00000037285.10	ENSMUSG00000011877.14	Git1	chr11	protein_coding	GIT ArfGAP 1
chr11	77399817	77400424	-	77399817;77400099	77399902;77400424	ES	0.33	50	50	ENSMUST00000060417.11	ENSMUSG00000044328.14	Trp53i13	chr11	protein_coding	transformation related protein 53 inducible protein 13
chr11	77403791	77406376	-	77403791	77403986	5pMXE	0.33	50	50	ENSMUST00000060417.11	ENSMUSG00000044328.14	Trp53i13	chr11	protein_coding	transformation related protein 53 inducible protein 13
chr11	77403791	77406661	-	77403791	77403986	5pMXE	0.33	50	50	ENSMUST00000060417.11	ENSMUSG00000044328.14	Trp53i13	chr11	protein_coding	transformation related protein 53 inducible protein 13
chr11	77400193	77400424	-	77400099	77400424	A3SS	0.33	50	50	ENSMUST00000060417.11	ENSMUSG00000044328.14	Trp53i13	chr11	protein_coding	transformation related protein 53 inducible protein 13
chr11	77399817	77400424	-	77399817;77400193	77399902;77400424	ES	0.33	50	50	ENSMUST00000126857.8	ENSMUSG00000044328.14	Trp53i13	chr11	protein_coding	transformation related protein 53 inducible protein 13
chr11	77399817	77400424	-	77400099	77400424	3pMXE	0.33	50	50	ENSMUST00000136101.2	ENSMUSG00000044328.14	Trp53i13	chr11	protein_coding	transformation related protein 53 inducible protein 13
chr11	77403791	77406661	-	77403791	77406376	5pMXE	0.33	50	50	ENSMUST00000136101.2	ENSMUSG00000044328.14	Trp53i13	chr11	protein_coding	transformation related protein 53 inducible protein 13
chr11	77406878	77429061	+	77406878	77409142	3pMXE	0.5	50	50	ENSMUST00000094004.5	ENSMUSG00000000686.12	Abhd15	chr11	protein_coding	abhydrolase domain containing 15
chr11	77409663	77429061	+	77406878	77429061	A5SS	0.5	50	50	ENSMUST00000145676.2	ENSMUSG00000000686.12	Abhd15	chr11	protein_coding	abhydrolase domain containing 15
chr11	77596367	77632512	+	77596367	77600509	3pMXE	0.5	50	50	ENSMUST00000100802.11	ENSMUSG00000037857.17	Nufip2	chr11	protein_coding	nuclear fragile X mental retardation protein interacting protein 2
chr11	77578637	77582368	+	77577333	77582368	A5SS	0.33	50	50	ENSMUST00000100802.11	ENSMUSG00000037857.17	Nufip2	chr11	protein_coding	nuclear fragile X mental retardation protein interacting protein 2
chr11	77579157	77582368	+	77577333	77582368	A5SS	0.33	50	50	ENSMUST00000100802.11	ENSMUSG00000037857.17	Nufip2	chr11	protein_coding	nuclear fragile X mental retardation protein interacting protein 2
chr11	77578637	77582368	+	77578637;77579157	77579113;77582368	ES	0.5	50	50	ENSMUST00000126942.2	ENSMUSG00000037857.17	Nufip2	chr11	protein_coding	nuclear fragile X mental retardation protein interacting protein 2
chr11	77712012	77714102	+	77712012;77713500	77713489;77714102	ES	0.33	50	50	ENSMUST00000108375.9	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77736634	77737717	+	77736634;77737308	77737198;77737717	ES	0.5	50	50	ENSMUST00000108375.9	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77744717	77748549	+	77744717;77745548	77745504;77748549	ES	0.5	50	50	ENSMUST00000108375.9	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77669140;77706717	77706682;77708445	+	77669140	77708445	cassetteExon	0.5	100	100	ENSMUST00000108375.9	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77669140;77706825	77706682;77708445	+	77669140	77708445	cassetteExon	0.5	100	100	ENSMUST00000108375.9	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77712012;77713930	77713916;77714102	+	77712012;77713500	77713489;77714102	MXE	0.5	100	100	ENSMUST00000108375.9	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77712012	77712356	+	77712012	77713489	A3SS	0.25	50	50	ENSMUST00000108375.9	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77748671	77749845	+	77748671	77755517	A3SS	0.5	50	50	ENSMUST00000108375.9	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77656542	77668061	+	77654205	77668061	A5SS	0.25	50	50	ENSMUST00000108375.9	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77657712	77668061	+	77654205	77668061	A5SS	0.25	50	50	ENSMUST00000108375.9	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77663051	77668061	+	77654205	77668061	A5SS	0.25	50	50	ENSMUST00000108375.9	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77692206	77708445	+	77669140	77708445	A5SS	0.25	50	50	ENSMUST00000108375.9	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77703017	77709407	+	77709104	77709407	A5SS&ES	0.5	50	50	ENSMUST00000108375.9	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77715517	77715929	+	77715111	77715929	A5SS	0.5	50	50	ENSMUST00000108375.9	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77728994	77731507	+	77727308	77731507	A5SS	0.5	50	50	ENSMUST00000108375.9	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77751157	77755517	+	77748671	77755517	A5SS	0.5	50	50	ENSMUST00000108375.9	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77657712	77668061	+	77656542	77668061	A5SS	0.25	50	50	ENSMUST00000164315.2	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77663051	77668061	+	77656542	77668061	A5SS	0.25	50	50	ENSMUST00000164315.2	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77663051	77668061	+	77657712	77668061	A5SS	0.25	50	50	ENSMUST00000108376.9	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77712012	77714102	+	77712012;77713930	77713916;77714102	ES	0.33	50	50	ENSMUST00000000645.13	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77712012	77712356	+	77712012	77713916	A3SS	0.25	50	50	ENSMUST00000000645.13	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77692206	77706682	+	77669140	77706682	A5SS	0.33	50	50	ENSMUST00000168348.8	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77692206	77708445	+	77706825	77708445	A5SS&ES	0.25	50	50	ENSMUST00000168348.8	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77705537	77706682	+	77669140	77706682	A5SS	0.33	50	50	ENSMUST00000168348.8	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77706717	77708445	+	77706825	77708445	A5SS	0.25	50	50	ENSMUST00000168348.8	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77692206	77708445	+	77706717	77708445	A5SS&ES	0.25	50	50	ENSMUST00000169105.8	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77692206;77706717	77706682;77708445	+	77692206	77708445	cassetteExon	0.5	100	100	ENSMUST00000100794.10	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77692206;77706825	77706682;77708445	+	77692206	77708445	cassetteExon	0.5	100	100	ENSMUST00000100794.10	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77712012;77713930	77713489;77714102	+	77712012	77714102	cassetteExon	0.5	100	100	ENSMUST00000100794.10	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77692206	77698617	+	77692206	77708445	A3SS	0.33	50	50	ENSMUST00000100794.10	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77712012	77712356	+	77712012	77714102	A3SS	0.25	50	50	ENSMUST00000100794.10	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77702407	77702835	+	77700684	77702835	A5SS	0.5	50	50	ENSMUST00000151373.4	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77692206	77698617	+	77692206	77706682	A3SS	0.33	50	50	ENSMUST00000130305.9	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77705537	77706682	+	77692206	77706682	A5SS	0.33	50	50	ENSMUST00000130305.9	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77712012;77713930	77713916;77714102	+	77712012;77713500	77712356;77714102	MXE	0.5	100	100	ENSMUST00000172303.10	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77748671	77755517	+	77748671;77751157	77749845;77755517	ES	0.5	50	50	ENSMUST00000135375.4	ENSMUSG00000000631.21	Myo18a	chr11	protein_coding	myosin XVIIIA
chr11	77774818	77775239	-	77774818	77782938	A5SS	0.5	50	50	ENSMUST00000017597.5	ENSMUSG00000017453.5	Pipox	chr11	protein_coding	pipecolic acid oxidase
chr11	77867767	77868363	+	77867767;77868109	77868071;77868363	ES	0.5	50	50	ENSMUST00000093995.10	ENSMUSG00000000632.14	Sez6	chr11	protein_coding	seizure related gene 6
chr11	77864086	77864573	+	77864086	77864609	A3SS	0.33	50	50	ENSMUST00000093995.10	ENSMUSG00000000632.14	Sez6	chr11	protein_coding	seizure related gene 6
chr11	77864086	77864664	+	77864086	77864609	A3SS	0.33	50	50	ENSMUST00000093995.10	ENSMUSG00000000632.14	Sez6	chr11	protein_coding	seizure related gene 6
chr11	77868670	77868855	+	77868670	77868839	A3SS	0.5	50	50	ENSMUST00000093995.10	ENSMUSG00000000632.14	Sez6	chr11	protein_coding	seizure related gene 6
chr11	77842270	77844234	+	77821940	77844234	A5SS	0.5	50	50	ENSMUST00000093995.10	ENSMUSG00000000632.14	Sez6	chr11	protein_coding	seizure related gene 6
chr11	77864086	77864573	+	77864086	77864664	A3SS	0.33	50	50	ENSMUST00000151982.8	ENSMUSG00000000632.14	Sez6	chr11	protein_coding	seizure related gene 6
chr11	77914645;77915693	77915639;77915787	+	77914645	77915787	cassetteExon	0.5	100	100	ENSMUST00000108360.8	ENSMUSG00000037791.16	Phf12	chr11	protein_coding	PHD finger protein 12
chr11	77915912	77916711	+	77915912	77916764	A3SS	0.5	50	50	ENSMUST00000108360.8	ENSMUSG00000037791.16	Phf12	chr11	protein_coding	PHD finger protein 12
chr11	77914645	77915787	+	77914645	77915639	A3SS	0.5	50	50	ENSMUST00000141620.2	ENSMUSG00000037791.16	Phf12	chr11	protein_coding	PHD finger protein 12
chr11	77923324	77924839	+	77923324;77923529	77923411;77924839	ES	0.5	50	50	ENSMUST00000021187.12	ENSMUSG00000020834.18	Dhrs13	chr11	protein_coding	dehydrogenase/reductase (SDR family) member 13
chr11	77923529	77924202	+	77923529	77924839	A3SS	0.5	50	50	ENSMUST00000021187.12	ENSMUSG00000020834.18	Dhrs13	chr11	protein_coding	dehydrogenase/reductase (SDR family) member 13
chr11	77923324	77924839	+	77923529	77924839	A5SS	0.5	50	50	ENSMUST00000122342.2	ENSMUSG00000020834.18	Dhrs13	chr11	protein_coding	dehydrogenase/reductase (SDR family) member 13
chr11	77940385;77944279	77944189;77945611	+	77940385	77945611	cassetteExon	0.5	100	100	ENSMUST00000072289.12	ENSMUSG00000061981.15	Flot2	chr11	protein_coding	flotillin 2
chr11	77940385;77944279	77944189;77946583	+	77940385;77945701	77945611;77946583	MXE	0.5	100	100	ENSMUST00000072289.12	ENSMUSG00000061981.15	Flot2	chr11	protein_coding	flotillin 2
chr11	77931157	77940304	+	77928938	77940304	A5SS	0.5	50	50	ENSMUST00000072289.12	ENSMUSG00000061981.15	Flot2	chr11	protein_coding	flotillin 2
chr11	77944279	77946583	+	77944279;77945701	77945611;77946583	ES	0.5	50	50	ENSMUST00000148162.9	ENSMUSG00000061981.15	Flot2	chr11	protein_coding	flotillin 2
chr11	78034040	78044635	+	78034040	78044523	A3SS	0.5	50	50	ENSMUST00000073705.12	ENSMUSG00000037750.17	Fam222b	chr11	protein_coding	family with sequence similarity 222, member B
chr11	78006663	78033919	+	77985617	78033919	A5SS	0.5	50	50	ENSMUST00000073705.12	ENSMUSG00000037750.17	Fam222b	chr11	protein_coding	family with sequence similarity 222, member B
chr11	78063429	78063751	-	78063509	78063751	A3SS	0.5	50	50	ENSMUST00000152611.8	ENSMUSG00000017405.15	Nek8	chr11	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 8
chr11	78063956	78067396	-	78063956	78067386	A5SS	0.5	50	50	ENSMUST00000152611.8	ENSMUSG00000017405.15	Nek8	chr11	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 8
chr11	78069062	78070196	+	78069882	78070196	A5SS	0.33	50	50	ENSMUST00000098545.12	ENSMUSG00000019437.18	Tlcd1	chr11	protein_coding	TLC domain containing 1
chr11	78070047	78070196	+	78069882	78070196	A5SS	0.33	50	50	ENSMUST00000098545.12	ENSMUSG00000019437.18	Tlcd1	chr11	protein_coding	TLC domain containing 1
chr11	78069062	78070196	+	78069062;78070047	78069864;78070196	ES	0.33	50	50	ENSMUST00000147819.8	ENSMUSG00000019437.18	Tlcd1	chr11	protein_coding	TLC domain containing 1
chr11	78069062;78069882	78069864;78070196	+	78069062	78070196	cassetteExon	0.5	100	100	ENSMUST00000145507.8	ENSMUSG00000019437.18	Tlcd1	chr11	protein_coding	TLC domain containing 1
chr11	78069062	78070196	+	78070047	78070196	5pMXE	0.33	50	50	ENSMUST00000092880.14	ENSMUSG00000019437.18	Tlcd1	chr11	protein_coding	TLC domain containing 1
chr11	78079337	78080397	+	78079337;78080216	78080004;78080397	ES	0.5	50	50	ENSMUST00000002128.14	ENSMUSG00000002059.19	Rab34	chr11	protein_coding	RAB34, member RAS oncogene family
chr11	78082281	78082437	+	78082281	78082401	A3SS	0.5	50	50	ENSMUST00000002128.14	ENSMUSG00000002059.19	Rab34	chr11	protein_coding	RAB34, member RAS oncogene family
chr11	78082091	78082191	+	78082115	78082191	A5SS	0.5	50	50	ENSMUST00000002128.14	ENSMUSG00000002059.19	Rab34	chr11	protein_coding	RAB34, member RAS oncogene family
chr11	78079337	78080397	+	78080216	78080397	5pMXE	0.5	50	50	ENSMUST00000108322.9	ENSMUSG00000002059.19	Rab34	chr11	protein_coding	RAB34, member RAS oncogene family
chr11	78092718	78095666	+	78092718;78095023	78094891;78095666	ES	0.33	50	50	ENSMUST00000078099.4	ENSMUSG00000044122.16	Proca1	chr11	protein_coding	protein interacting with cyclin A1
chr11	78095023;78095576	78095420;78095666	+	78095023	78095666	cassetteExon	0.5	100	100	ENSMUST00000078099.4	ENSMUSG00000044122.16	Proca1	chr11	protein_coding	protein interacting with cyclin A1
chr11	78085067	78092638	+	78084592	78092638	A5SS	0.33	50	50	ENSMUST00000078099.4	ENSMUSG00000044122.16	Proca1	chr11	protein_coding	protein interacting with cyclin A1
chr11	78085780	78092638	+	78084592	78092638	A5SS	0.33	50	50	ENSMUST00000078099.4	ENSMUSG00000044122.16	Proca1	chr11	protein_coding	protein interacting with cyclin A1
chr11	78085780	78092638	+	78085067	78092638	A5SS	0.33	50	50	ENSMUST00000239287.2	ENSMUSG00000044122.16	Proca1	chr11	protein_coding	protein interacting with cyclin A1
chr11	78095576	78095666	+	78092718	78095666	A5SS	0.33	50	50	ENSMUST00000060539.13	ENSMUSG00000044122.16	Proca1	chr11	protein_coding	protein interacting with cyclin A1
chr11	78092718	78095666	+	78092718;78095576	78094891;78095666	ES	0.33	50	50	ENSMUST00000124772.3	ENSMUSG00000044122.16	Proca1	chr11	protein_coding	protein interacting with cyclin A1
chr11	78095023	78095666	+	78095576	78095666	A5SS	0.33	50	50	ENSMUST00000124772.3	ENSMUSG00000044122.16	Proca1	chr11	protein_coding	protein interacting with cyclin A1
chr11	78110916;78111573	78111423;78111947	-	78110916	78111947	cassetteExon	0.5	100	100	ENSMUST00000002121.5	ENSMUSG00000002052.7	Supt6	chr11	protein_coding	SPT6, histone chaperone and transcription elongation factor
chr11	78142038	78145681	+	78142038	78145677	A3SS	0.5	50	50	ENSMUST00000002133.9	ENSMUSG00000002064.11	Sdf2	chr11	protein_coding	stromal cell derived factor 2
chr11	78141371	78141842	+	78136996	78141842	A5SS	0.5	50	50	ENSMUST00000002133.9	ENSMUSG00000002064.11	Sdf2	chr11	protein_coding	stromal cell derived factor 2
chr11	78153654	78154416	+	78153654	78154380	A3SS	0.5	50	50	ENSMUST00000125459.2	ENSMUSG00000010277.8	2610507B11Rik	chr11	protein_coding	RIKEN cDNA 2610507B11 gene
chr11	78152743	78153525	+	78153135	78153525	A5SS	0.5	50	50	ENSMUST00000125459.2	ENSMUSG00000010277.8	2610507B11Rik	chr11	protein_coding	RIKEN cDNA 2610507B11 gene
chr11	78158068	78158938	+	78158068	78158925	A3SS	0.5	50	50	ENSMUST00000010421.7	ENSMUSG00000010277.8	2610507B11Rik	chr11	protein_coding	RIKEN cDNA 2610507B11 gene
chr11	78164125	78164229	+	78164125	78164267	A3SS	0.5	50	50	ENSMUST00000010421.7	ENSMUSG00000010277.8	2610507B11Rik	chr11	protein_coding	RIKEN cDNA 2610507B11 gene
chr11	78181765	78182247	+	78181765	78182250	A3SS	0.5	50	50	ENSMUST00000046361.5	ENSMUSG00000037593.13	Rskr	chr11	protein_coding	ribosomal protein S6 kinase related
chr11	78184758	78184888	+	78184790	78184888	A5SS	0.5	50	50	ENSMUST00000238934.2	ENSMUSG00000037593.13	Rskr	chr11	protein_coding	ribosomal protein S6 kinase related
chr11	78196328	78203941	+	78196146	78203941	A5SS	0.5	50	50	ENSMUST00000045026.4	ENSMUSG00000002055.10	Spag5	chr11	protein_coding	sperm associated antigen 5
chr11	78208913	78210293	+	78206867	78210293	A5SS	0.5	50	50	ENSMUST00000045026.4	ENSMUSG00000002055.10	Spag5	chr11	protein_coding	sperm associated antigen 5
chr11	78216642	78217088	+	78216642;78216960	78216761;78217088	ES	0.5	50	50	ENSMUST00000017534.15	ENSMUSG00000017390.16	Aldoc	chr11	protein_coding	aldolase C, fructose-bisphosphate
chr11	78214048	78214888	+	78214048	78215216	A3SS	0.5	50	50	ENSMUST00000017534.15	ENSMUSG00000017390.16	Aldoc	chr11	protein_coding	aldolase C, fructose-bisphosphate
chr11	78216642	78217088	+	78216642	78216761	3pMXE	0.5	50	50	ENSMUST00000128032.2	ENSMUSG00000017390.16	Aldoc	chr11	protein_coding	aldolase C, fructose-bisphosphate
chr11	78239085	78239291	+	78239085	78239357	A3SS	0.5	50	50	ENSMUST00000002127.14	ENSMUSG00000002058.14	Unc119	chr11	protein_coding	unc-119 lipid binding chaperone
chr11	78237585	78238044	+	78234612	78238044	A5SS	0.5	50	50	ENSMUST00000002127.14	ENSMUSG00000002058.14	Unc119	chr11	protein_coding	unc-119 lipid binding chaperone
chr11	78356831	78359451	+	78356831;78358029	78357177;78359451	ES	0.5	50	50	ENSMUST00000001126.4	ENSMUSG00000020829.10	Slc46a1	chr11	protein_coding	solute carrier family 46, member 1
chr11	78356831	78357177	+	78356831	78359451	A3SS	0.5	50	50	ENSMUST00000146431.3	ENSMUSG00000020829.10	Slc46a1	chr11	protein_coding	solute carrier family 46, member 1
chr11	78358029	78359451	+	78356831	78359451	A5SS	0.5	50	50	ENSMUST00000146431.3	ENSMUSG00000020829.10	Slc46a1	chr11	protein_coding	solute carrier family 46, member 1
chr11	78374362	78378049	-	78374482	78378049	A3SS	0.5	50	50	ENSMUST00000108287.10	ENSMUSG00000050132.14	Sarm1	chr11	protein_coding	sterile alpha and HEAT/Armadillo motif containing 1
chr11	78382011	78388042	-	78382011	78387815	A5SS	0.5	50	50	ENSMUST00000108287.10	ENSMUSG00000050132.14	Sarm1	chr11	protein_coding	sterile alpha and HEAT/Armadillo motif containing 1
chr11	78394411	78394565	+	78394403	78394565	A5SS	0.5	50	50	ENSMUST00000001130.8	ENSMUSG00000001103.8	Sebox	chr11	protein_coding	SEBOX homeobox
chr11	78403631	78404746	+	78403298	78404746	A5SS	0.5	50	50	ENSMUST00000001127.11	ENSMUSG00000001100.11	Poldip2	chr11	protein_coding	polymerase (DNA-directed), delta interacting protein 2
chr11	78410194	78411978	+	78410131	78411978	A5SS	0.5	50	50	ENSMUST00000001127.11	ENSMUSG00000001100.11	Poldip2	chr11	protein_coding	polymerase (DNA-directed), delta interacting protein 2
chr11	78421173	78426912	-	78421173	78426899	A5SS	0.5	50	50	ENSMUST00000017759.9	ENSMUSG00000017615.13	Tnfaip1	chr11	protein_coding	tumor necrosis factor, alpha-induced protein 1 (endothelial)
chr11	78427402	78429660	+	78427402;78429564	78429336;78429660	ES	0.5	50	50	ENSMUST00000128788.8	ENSMUSG00000001105.16	Ift20	chr11	protein_coding	intraflagellar transport 20
chr11	78429564	78429638	+	78429564	78429660	A3SS	0.5	50	50	ENSMUST00000128788.8	ENSMUSG00000001105.16	Ift20	chr11	protein_coding	intraflagellar transport 20
chr11	78427402	78429660	+	78427402	78429336	A3SS&ES	0.5	50	50	ENSMUST00000050366.15	ENSMUSG00000001105.16	Ift20	chr11	protein_coding	intraflagellar transport 20
chr11	78458568	78459719	-	78458767	78459719	A3SS	0.5	50	50	ENSMUST00000165475.2	ENSMUSG00000017376.16	Nlk	chr11	protein_coding	nemo like kinase
chr11	78717462	78728916	+	78717462;78726984	78726844;78728916	ES	0.5	50	50	ENSMUST00000147875.9	ENSMUSG00000072640.12	Lyrm9	chr11	protein_coding	LYR motif containing 9
chr11	78729119	78729949	+	78729008	78729949	A5SS	0.5	50	50	ENSMUST00000147875.9	ENSMUSG00000072640.12	Lyrm9	chr11	protein_coding	LYR motif containing 9
chr11	78815681	78819400	+	78813203	78819400	A5SS	0.33	50	50	ENSMUST00000018610.7	ENSMUSG00000020826.10	Nos2	chr11	protein_coding	nitric oxide synthase 2, inducible
chr11	78816132	78819400	+	78813203	78819400	A5SS	0.33	50	50	ENSMUST00000018610.7	ENSMUSG00000020826.10	Nos2	chr11	protein_coding	nitric oxide synthase 2, inducible
chr11	78816132	78819400	+	78815681	78819400	A5SS	0.33	50	50	ENSMUST00000208783.2	ENSMUSG00000020826.10	Nos2	chr11	protein_coding	nitric oxide synthase 2, inducible
chr11	78858859;78860629	78860540;78862143	-	78858859	78862143	cassetteExon	0.5	100	100	ENSMUST00000108268.10	ENSMUSG00000001123.16	Lgals9	chr11	protein_coding	lectin, galactose binding, soluble 9
chr11	78858859;78860632	78860540;78862143	-	78858859	78862143	cassetteExon	0.5	100	100	ENSMUST00000108268.10	ENSMUSG00000001123.16	Lgals9	chr11	protein_coding	lectin, galactose binding, soluble 9
chr11	78860629	78862143	-	78860632	78862143	A3SS	0.33	50	50	ENSMUST00000108269.10	ENSMUSG00000001123.16	Lgals9	chr11	protein_coding	lectin, galactose binding, soluble 9
chr11	78858859	78862143	-	78858859	78860540	5pMXE	0.5	50	50	ENSMUST00000140073.2	ENSMUSG00000001123.16	Lgals9	chr11	protein_coding	lectin, galactose binding, soluble 9
chr11	78907089;78909206	78909126;78910388	-	78907089	78910388	cassetteExon	0.5	100	100	ENSMUST00000018478.11	ENSMUSG00000018334.19	Ksr1	chr11	protein_coding	kinase suppressor of ras 1
chr11	78908162	78910388	-	78907089	78910388	A3SS	0.33	50	50	ENSMUST00000018478.11	ENSMUSG00000018334.19	Ksr1	chr11	protein_coding	kinase suppressor of ras 1
chr11	78921948	78924044	-	78919909	78924044	A3SS	0.5	50	50	ENSMUST00000018478.11	ENSMUSG00000018334.19	Ksr1	chr11	protein_coding	kinase suppressor of ras 1
chr11	78938270	78948256	-	78938270	78965172	A5SS	0.33	50	50	ENSMUST00000018478.11	ENSMUSG00000018334.19	Ksr1	chr11	protein_coding	kinase suppressor of ras 1
chr11	78938270	78950484	-	78938270	78965172	A5SS	0.33	50	50	ENSMUST00000018478.11	ENSMUSG00000018334.19	Ksr1	chr11	protein_coding	kinase suppressor of ras 1
chr11	78908162	78910388	-	78909206	78910388	A3SS&ES	0.33	50	50	ENSMUST00000226282.2	ENSMUSG00000018334.19	Ksr1	chr11	protein_coding	kinase suppressor of ras 1
chr11	78938270	78948256	-	78938270	78950484	A5SS	0.33	50	50	ENSMUST00000226282.2	ENSMUSG00000018334.19	Ksr1	chr11	protein_coding	kinase suppressor of ras 1
chr11	79137127	79141807	-	79137127;79139485	79139217;79141807	ES	0.33	50	50	ENSMUST00000017821.12	ENSMUSG00000017677.12	Wsb1	chr11	protein_coding	WD repeat and SOCS box-containing 1
chr11	79132982;79134401	79134226;79135289	-	79132982	79135289	cassetteExon	0.5	100	100	ENSMUST00000017821.12	ENSMUSG00000017677.12	Wsb1	chr11	protein_coding	WD repeat and SOCS box-containing 1
chr11	79139339	79141807	-	79139485	79141807	A3SS	0.33	50	50	ENSMUST00000017821.12	ENSMUSG00000017677.12	Wsb1	chr11	protein_coding	WD repeat and SOCS box-containing 1
chr11	79132982	79133325	-	79132982	79135289	A5SS	0.33	50	50	ENSMUST00000017821.12	ENSMUSG00000017677.12	Wsb1	chr11	protein_coding	WD repeat and SOCS box-containing 1
chr11	79137127	79141807	-	79137127	79139217	5pMXE	0.5	50	50	ENSMUST00000131818.8	ENSMUSG00000017677.12	Wsb1	chr11	protein_coding	WD repeat and SOCS box-containing 1
chr11	79132982	79133325	-	79132982	79134226	A5SS	0.33	50	50	ENSMUST00000131818.8	ENSMUSG00000017677.12	Wsb1	chr11	protein_coding	WD repeat and SOCS box-containing 1
chr11	79132982	79135289	-	79134401	79135289	3pMXE	0.5	50	50	ENSMUST00000145772.8	ENSMUSG00000017677.12	Wsb1	chr11	protein_coding	WD repeat and SOCS box-containing 1
chr11	79137127;79139339	79139217;79141807	-	79137127	79141807	cassetteExon	0.5	100	100	ENSMUST00000145772.8	ENSMUSG00000017677.12	Wsb1	chr11	protein_coding	WD repeat and SOCS box-containing 1
chr11	79150248	79164603	-	79150248	79164488	A5SS	0.5	50	50	ENSMUST00000208339.2	ENSMUSG00000108822.2	Gm44787	chr11	lncRNA	predicted gene 44787
chr11	79230885	79275001	+	79230885	79235659	3pMXE	0.5	50	50	ENSMUST00000145839.2	ENSMUSG00000020716.17	Nf1	chr11	protein_coding	neurofibromin 1
chr11	79303584	79309378	+	79303584;79305096	79305067;79309378	ES	0.5	50	50	ENSMUST00000219057.2	ENSMUSG00000020716.17	Nf1	chr11	protein_coding	neurofibromin 1
chr11	79349732;79354121	79354059;79359543	+	79349732	79359543	cassetteExon	0.5	100	100	ENSMUST00000108251.9	ENSMUSG00000020716.17	Nf1	chr11	protein_coding	neurofibromin 1
chr11	79349732;79358980	79358940;79359543	+	79349732	79359543	cassetteExon	0.5	100	100	ENSMUST00000108251.9	ENSMUSG00000020716.17	Nf1	chr11	protein_coding	neurofibromin 1
chr11	79455772	79456244	+	79455772	79456247	A3SS	0.5	50	50	ENSMUST00000108251.9	ENSMUSG00000020716.17	Nf1	chr11	protein_coding	neurofibromin 1
chr11	79349732;79358980	79358940;79359543	+	79349732;79354121	79354059;79359543	MXE	0.5	100	100	ENSMUST00000071325.9	ENSMUSG00000020716.17	Nf1	chr11	protein_coding	neurofibromin 1
chr11	79354121;79358980	79358940;79359543	+	79354121	79359543	cassetteExon	0.5	100	100	ENSMUST00000071325.9	ENSMUSG00000020716.17	Nf1	chr11	protein_coding	neurofibromin 1
chr11	79349732	79358940	+	79349732;79354121	79354059;79358940	ES	0.5	50	50	ENSMUST00000122917.8	ENSMUSG00000020716.17	Nf1	chr11	protein_coding	neurofibromin 1
chr11	79418132	79418408	-	79414561	79418408	A3SS	0.5	50	50	ENSMUST00000093983.11	ENSMUSG00000070354.14	Evi2	chr11	protein_coding	ecotropic viral integration site 2
chr11	79419441	79421195	-	79418628	79421195	A3SS	0.5	50	50	ENSMUST00000093983.11	ENSMUSG00000070354.14	Evi2	chr11	protein_coding	ecotropic viral integration site 2
chr11	79418628	79418748	-	79418628	79421195	A5SS	0.5	50	50	ENSMUST00000093983.11	ENSMUSG00000070354.14	Evi2	chr11	protein_coding	ecotropic viral integration site 2
chr11	79551682	79571614	+	79511381	79571614	A5SS	0.5	50	50	ENSMUST00000017783.13	ENSMUSG00000017639.14	Rab11fip4	chr11	protein_coding	RAB11 family interacting protein 4 (class II)
chr11	79673382	79686922	-	79673382	79673596	5pMXE	0.33	50	50	ENSMUST00000150312.2	ENSMUSG00000086474.3	9130204K15Rik	chr11	lncRNA	RIKEN cDNA 9130204K15 gene
chr11	79673382	79751410	-	79673382	79673596	5pMXE	0.33	50	50	ENSMUST00000150312.2	ENSMUSG00000086474.3	9130204K15Rik	chr11	lncRNA	RIKEN cDNA 9130204K15 gene
chr11	79673382	79751410	-	79673382	79686922	A5SS&ES	0.33	50	50	ENSMUST00000131441.2	ENSMUSG00000086474.3	9130204K15Rik	chr11	lncRNA	RIKEN cDNA 9130204K15 gene
chr11	79687117	79695722	-	79687117	79701058	A5SS	0.5	50	50	ENSMUST00000131441.2	ENSMUSG00000086474.3	9130204K15Rik	chr11	lncRNA	RIKEN cDNA 9130204K15 gene
chr11	79916137	79919974	+	79916137;79916780	79916623;79919974	ES	0.5	50	50	ENSMUST00000163272.2	ENSMUSG00000017548.16	Suz12	chr11	protein_coding	SUZ12 polycomb repressive complex 2 subunit
chr11	79886635;79889951	79889883;79898339	+	79886635	79898339	cassetteExon	0.5	100	100	ENSMUST00000163272.2	ENSMUSG00000017548.16	Suz12	chr11	protein_coding	SUZ12 polycomb repressive complex 2 subunit
chr11	79893010	79898339	+	79886635	79898339	A5SS	0.33	50	50	ENSMUST00000163272.2	ENSMUSG00000017548.16	Suz12	chr11	protein_coding	SUZ12 polycomb repressive complex 2 subunit
chr11	79889951;79893010	79892971;79898339	+	79889951	79898339	cassetteExon	0.5	100	100	ENSMUST00000017692.15	ENSMUSG00000017548.16	Suz12	chr11	protein_coding	SUZ12 polycomb repressive complex 2 subunit
chr11	79886635	79898339	+	79886635	79889883	3pMXE	0.5	50	50	ENSMUST00000132312.8	ENSMUSG00000017548.16	Suz12	chr11	protein_coding	SUZ12 polycomb repressive complex 2 subunit
chr11	79948840	79950924	-	79948840;79950203	79950026;79950924	ES	0.5	50	50	ENSMUST00000103233.10	ENSMUSG00000017561.17	Crlf3	chr11	protein_coding	cytokine receptor-like factor 3
chr11	79951011	79971610	-	79951011;79955225	79955018;79971610	ES	0.5	50	50	ENSMUST00000103233.10	ENSMUSG00000017561.17	Crlf3	chr11	protein_coding	cytokine receptor-like factor 3
chr11	79938563;79939530	79939418;79947278	-	79938563	79947278	cassetteExon	0.5	100	100	ENSMUST00000103233.10	ENSMUSG00000017561.17	Crlf3	chr11	protein_coding	cytokine receptor-like factor 3
chr11	79947123	79947278	-	79938563	79947278	A3SS	0.33	50	50	ENSMUST00000103233.10	ENSMUSG00000017561.17	Crlf3	chr11	protein_coding	cytokine receptor-like factor 3
chr11	79955225	79971614	-	79955225	79971610	A5SS	0.5	50	50	ENSMUST00000103233.10	ENSMUSG00000017561.17	Crlf3	chr11	protein_coding	cytokine receptor-like factor 3
chr11	79947123	79947278	-	79939530	79947278	A3SS	0.33	50	50	ENSMUST00000061283.15	ENSMUSG00000017561.17	Crlf3	chr11	protein_coding	cytokine receptor-like factor 3
chr11	79948840	79950924	-	79950203	79950924	3pMXE	0.5	50	50	ENSMUST00000179855.2	ENSMUSG00000017561.17	Crlf3	chr11	protein_coding	cytokine receptor-like factor 3
chr11	79951011	79971610	-	79951011	79955018	A5SS&ES	0.5	50	50	ENSMUST00000179855.2	ENSMUSG00000017561.17	Crlf3	chr11	protein_coding	cytokine receptor-like factor 3
chr11	79951011	79971610	-	79955225	79971610	3pMXE	0.5	50	50	ENSMUST00000178280.2	ENSMUSG00000017561.17	Crlf3	chr11	protein_coding	cytokine receptor-like factor 3
chr11	79992734	79994123	+	79992734	79994086	A3SS	0.5	50	50	ENSMUST00000017694.7	ENSMUSG00000017550.15	Atad5	chr11	protein_coding	ATPase family, AAA domain containing 5
chr11	80003654	80003901	+	80003663	80003901	A5SS	0.5	50	50	ENSMUST00000017694.7	ENSMUSG00000017550.15	Atad5	chr11	protein_coding	ATPase family, AAA domain containing 5
chr11	80028893	80030692	-	80028907	80030692	A3SS	0.5	50	50	ENSMUST00000136996.2	ENSMUSG00000046909.10	Tefm	chr11	protein_coding	transcription elongation factor, mitochondrial
chr11	80031396	80032903	-	80031149	80032903	A3SS	0.5	50	50	ENSMUST00000050207.10	ENSMUSG00000046909.10	Tefm	chr11	protein_coding	transcription elongation factor, mitochondrial
chr11	80051068	80056499	+	80051068;80053086	80052974;80056499	ES	0.5	50	50	ENSMUST00000021050.14	ENSMUSG00000020709.16	Adap2	chr11	protein_coding	ArfGAP with dual PH domains 2
chr11	80080193	80080682	+	80080193	80084712	A3SS	0.5	50	50	ENSMUST00000017839.3	ENSMUSG00000020707.7	Rnf135	chr11	protein_coding	ring finger protein 135
chr11	80116942	80124208	+	80116942;80118158	80118106;80124208	ES	0.5	50	50	ENSMUST00000077451.14	ENSMUSG00000017686.18	Rhot1	chr11	protein_coding	ras homolog family member T1
chr11	80145688	80148340	+	80145688;80146783	80146688;80148340	ES	0.5	50	50	ENSMUST00000077451.14	ENSMUSG00000017686.18	Rhot1	chr11	protein_coding	ras homolog family member T1
chr11	80146783	80156568	+	80146783;80148462	80148340;80156568	ES	0.25	50	50	ENSMUST00000077451.14	ENSMUSG00000017686.18	Rhot1	chr11	protein_coding	ras homolog family member T1
chr11	80148462;80155213	80155070;80156568	+	80148462	80156568	cassetteExon	0.5	100	100	ENSMUST00000077451.14	ENSMUSG00000017686.18	Rhot1	chr11	protein_coding	ras homolog family member T1
chr11	80133507	80134228	+	80133507	80134196	A3SS	0.5	50	50	ENSMUST00000077451.14	ENSMUSG00000017686.18	Rhot1	chr11	protein_coding	ras homolog family member T1
chr11	80145688	80156568	+	80145688;80148462	80148340;80156568	ES	0.25	50	50	ENSMUST00000055056.16	ENSMUSG00000017686.18	Rhot1	chr11	protein_coding	ras homolog family member T1
chr11	80145688;80146783	80146688;80156568	+	80145688;80148462	80148340;80156568	MXE	0.5	100	100	ENSMUST00000055056.16	ENSMUSG00000017686.18	Rhot1	chr11	protein_coding	ras homolog family member T1
chr11	80145688;80146783	80146688;80156568	+	80145688	80156568	cassetteExon	0.5	100	100	ENSMUST00000092857.13	ENSMUSG00000017686.18	Rhot1	chr11	protein_coding	ras homolog family member T1
chr11	80155213	80156568	+	80145688	80156568	A5SS	0.25	50	50	ENSMUST00000092857.13	ENSMUSG00000017686.18	Rhot1	chr11	protein_coding	ras homolog family member T1
chr11	80155213	80156568	+	80146783	80156568	A5SS	0.25	50	50	ENSMUST00000017831.16	ENSMUSG00000017686.18	Rhot1	chr11	protein_coding	ras homolog family member T1
chr11	80148462	80156568	+	80155213	80156568	5pMXE	0.25	50	50	ENSMUST00000236882.2	ENSMUSG00000017686.18	Rhot1	chr11	protein_coding	ras homolog family member T1
chr11	80237709	80244238	+	80237712	80244238	A5SS	0.5	50	50	ENSMUST00000017836.8	ENSMUSG00000017692.9	Rhbdl3	chr11	protein_coding	rhomboid like 3
chr11	80267709	80268580	-	80267709	80268668	A5SS	0.5	50	50	ENSMUST00000179332.8	ENSMUSG00000057181.16	5730455P16Rik	chr11	protein_coding	RIKEN cDNA 5730455P16 gene
chr11	80282818	80285112	+	80282818;80284002	80283910;80285112	ES	0.5	50	50	ENSMUST00000165565.8	ENSMUSG00000017421.19	Zfp207	chr11	protein_coding	zinc finger protein 207
chr11	80280156;80280647	80280600;80282157	+	80280156	80282157	cassetteExon	0.5	100	100	ENSMUST00000165565.8	ENSMUSG00000017421.19	Zfp207	chr11	protein_coding	zinc finger protein 207
chr11	80286399	80289242	+	80286399;80286701	80286618;80289242	ES	0.5	50	50	ENSMUST00000178665.8	ENSMUSG00000017421.19	Zfp207	chr11	protein_coding	zinc finger protein 207
chr11	80289296	80293475	+	80289296	80293472	A3SS	0.5	50	50	ENSMUST00000178665.8	ENSMUSG00000017421.19	Zfp207	chr11	protein_coding	zinc finger protein 207
chr11	80282818	80285112	+	80282818	80283910	3pMXE	0.5	50	50	ENSMUST00000108216.8	ENSMUSG00000017421.19	Zfp207	chr11	protein_coding	zinc finger protein 207
chr11	80320767	80322531	+	80319581	80322531	A5SS	0.5	50	50	ENSMUST00000172641.2	ENSMUSG00000017428.17	Psmd11	chr11	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
chr11	80322632	80336068	+	80322632;80329201	80329077;80336068	ES	0.33	50	50	ENSMUST00000173938.8	ENSMUSG00000017428.17	Psmd11	chr11	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
chr11	80353497	80360628	+	80353497;80355902	80355840;80360628	ES	0.5	50	50	ENSMUST00000173938.8	ENSMUSG00000017428.17	Psmd11	chr11	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
chr11	80360753	80361452	+	80360753;80361244	80361209;80361452	ES	0.5	50	50	ENSMUST00000173938.8	ENSMUSG00000017428.17	Psmd11	chr11	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
chr11	80322632;80325406	80325344;80329077	+	80322632	80329077	cassetteExon	0.5	100	100	ENSMUST00000173938.8	ENSMUSG00000017428.17	Psmd11	chr11	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
chr11	80329201;80329456	80329331;80336068	+	80329201	80336068	cassetteExon	0.5	100	100	ENSMUST00000173938.8	ENSMUSG00000017428.17	Psmd11	chr11	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
chr11	80329201;80329456	80329347;80336068	+	80329201	80336068	cassetteExon	0.5	100	100	ENSMUST00000173938.8	ENSMUSG00000017428.17	Psmd11	chr11	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
chr11	80329201	80355847	+	80329201	80336068	A3SS&ES	0.2	50	50	ENSMUST00000173938.8	ENSMUSG00000017428.17	Psmd11	chr11	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
chr11	80360856	80361209	+	80360753	80361209	A5SS	0.5	50	50	ENSMUST00000173938.8	ENSMUSG00000017428.17	Psmd11	chr11	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
chr11	80362420	80363919	+	80362420	80362536	A3SS	0.5	50	50	ENSMUST00000017572.14	ENSMUSG00000017428.17	Psmd11	chr11	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
chr11	80360753	80361452	+	80361244	80361452	A5SS	0.5	50	50	ENSMUST00000147898.8	ENSMUSG00000017428.17	Psmd11	chr11	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
chr11	80329201	80329347	+	80329201	80329331	A3SS	0.33	50	50	ENSMUST00000172615.8	ENSMUSG00000017428.17	Psmd11	chr11	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
chr11	80322632	80336068	+	80322632	80329077	A3SS&ES	0.33	50	50	ENSMUST00000172773.8	ENSMUSG00000017428.17	Psmd11	chr11	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
chr11	80329201	80329331	+	80329201	80347066	A3SS	0.25	50	50	ENSMUST00000172773.8	ENSMUSG00000017428.17	Psmd11	chr11	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
chr11	80329201	80329347	+	80329201	80347066	A3SS	0.25	50	50	ENSMUST00000172773.8	ENSMUSG00000017428.17	Psmd11	chr11	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
chr11	80329201	80336068	+	80329201	80347066	A3SS	0.25	50	50	ENSMUST00000172773.8	ENSMUSG00000017428.17	Psmd11	chr11	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
chr11	80336797	80347066	+	80329201	80347066	A5SS	0.5	50	50	ENSMUST00000172773.8	ENSMUSG00000017428.17	Psmd11	chr11	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
chr11	80322632;80329201	80329077;80347066	+	80322632;80336797	80336068;80347066	MXE	0.5	100	100	ENSMUST00000174743.8	ENSMUSG00000017428.17	Psmd11	chr11	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
chr11	80322632;80329456	80329077;80336068	+	80322632	80336068	cassetteExon	0.5	100	100	ENSMUST00000174743.8	ENSMUSG00000017428.17	Psmd11	chr11	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
chr11	80322632	80325344	+	80322632	80336068	A3SS	0.33	50	50	ENSMUST00000174743.8	ENSMUSG00000017428.17	Psmd11	chr11	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
chr11	80329201	80329331	+	80329201	80355847	A3SS	0.2	50	50	ENSMUST00000172847.8	ENSMUSG00000017428.17	Psmd11	chr11	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
chr11	80329201	80329347	+	80329201	80355847	A3SS	0.2	50	50	ENSMUST00000172847.8	ENSMUSG00000017428.17	Psmd11	chr11	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
chr11	80329201	80347066	+	80329201	80355847	A3SS	0.2	50	50	ENSMUST00000172847.8	ENSMUSG00000017428.17	Psmd11	chr11	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
chr11	80353497	80360628	+	80355902	80360628	A5SS&ES	0.5	50	50	ENSMUST00000172847.8	ENSMUSG00000017428.17	Psmd11	chr11	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
chr11	80474816	80477673	-	80448414	80477673	A3SS	0.5	50	50	ENSMUST00000041065.14	ENSMUSG00000035441.15	Myo1d	chr11	protein_coding	myosin ID
chr11	80749347	80753786	+	80749347;80753013	80752901;80753786	ES	0.5	50	50	ENSMUST00000103223.8	ENSMUSG00000053184.16	Spaca3	chr11	protein_coding	sperm acrosome associated 3
chr11	80862440	81858456	-	80862440	81042584	5pMXE	0.5	50	50	ENSMUST00000021045.13	ENSMUSG00000020704.14	Asic2	chr11	protein_coding	acid-sensing (proton-gated) ion channel 2
chr11	81992782	81993437	+	81992798	81993437	A5SS	0.5	50	50	ENSMUST00000000194.4	ENSMUSG00000035352.4	Ccl12	chr11	protein_coding	chemokine (C-C motif) ligand 12
chr11	82068959	82087573	-	82068959	82070495	5pMXE	0.5	50	50	ENSMUST00000108189.9	ENSMUSG00000020702.14	Ccl1	chr11	protein_coding	chemokine (C-C motif) ligand 1
chr11	82067836	82068845	-	82067737	82068845	A3SS	0.5	50	50	ENSMUST00000108189.9	ENSMUSG00000020702.14	Ccl1	chr11	protein_coding	chemokine (C-C motif) ligand 1
chr11	82280106	82325069	+	82279939	82325069	A5SS	0.5	50	50	ENSMUST00000092852.6	ENSMUSG00000020701.13	Tmem132e	chr11	protein_coding	transmembrane protein 132E
chr11	82653077	82654848	-	82653077	82654917	A5SS	0.5	50	50	ENSMUST00000021040.10	ENSMUSG00000020698.12	Cct6b	chr11	protein_coding	chaperonin containing Tcp1, subunit 6b (zeta)
chr11	82676284	82678457	+	82676284	82678454	A3SS	0.5	50	50	ENSMUST00000092849.12	ENSMUSG00000020697.17	Lig3	chr11	protein_coding	ligase III, DNA, ATP-dependent
chr11	82691123	82691325	+	82691123	82692107	A3SS	0.5	50	50	ENSMUST00000092849.12	ENSMUSG00000020697.17	Lig3	chr11	protein_coding	ligase III, DNA, ATP-dependent
chr11	82672098	82674172	+	82672102	82674172	A5SS	0.5	50	50	ENSMUST00000092849.12	ENSMUSG00000020697.17	Lig3	chr11	protein_coding	ligase III, DNA, ATP-dependent
chr11	82701044	82703226	-	82701044;82701937	82701854;82703226	ES	0.5	50	50	ENSMUST00000074515.11	ENSMUSG00000020696.19	Rffl	chr11	protein_coding	ring finger and FYVE like domain containing protein
chr11	82709429	82724907	-	82709429	82719556	5pMXE	0.25	50	50	ENSMUST00000074515.11	ENSMUSG00000020696.19	Rffl	chr11	protein_coding	ring finger and FYVE like domain containing protein
chr11	82709429	82736578	-	82709429	82719556	5pMXE	0.25	50	50	ENSMUST00000074515.11	ENSMUSG00000020696.19	Rffl	chr11	protein_coding	ring finger and FYVE like domain containing protein
chr11	82709429	82761834	-	82709429	82719556	5pMXE	0.25	50	50	ENSMUST00000074515.11	ENSMUSG00000020696.19	Rffl	chr11	protein_coding	ring finger and FYVE like domain containing protein
chr11	82698363	82699339	-	82697015	82699339	A3SS	0.5	50	50	ENSMUST00000074515.11	ENSMUSG00000020696.19	Rffl	chr11	protein_coding	ring finger and FYVE like domain containing protein
chr11	82709429	82736578	-	82709429	82724907	A5SS&ES	0.33	50	50	ENSMUST00000093975.12	ENSMUSG00000020696.19	Rffl	chr11	protein_coding	ring finger and FYVE like domain containing protein
chr11	82709429;82736721	82736578;82761834	-	82709429	82761834	cassetteExon	0.5	100	100	ENSMUST00000108173.10	ENSMUSG00000020696.19	Rffl	chr11	protein_coding	ring finger and FYVE like domain containing protein
chr11	82709429	82724907	-	82709429	82761834	A5SS	0.25	50	50	ENSMUST00000108173.10	ENSMUSG00000020696.19	Rffl	chr11	protein_coding	ring finger and FYVE like domain containing protein
chr11	82709429	82761834	-	82709429	82736578	5pMXE	0.25	50	50	ENSMUST00000126660.2	ENSMUSG00000020696.19	Rffl	chr11	protein_coding	ring finger and FYVE like domain containing protein
chr11	82770178	82772597	-	82770178;82772497	82772427;82772597	ES	0.5	50	50	ENSMUST00000146053.8	ENSMUSG00000018841.18	Rad51d	chr11	protein_coding	RAD51 paralog D
chr11	82773808	82774709	-	82773808;82774453	82774319;82774709	ES	0.5	50	50	ENSMUST00000146053.8	ENSMUSG00000018841.18	Rad51d	chr11	protein_coding	RAD51 paralog D
chr11	82774790;82780636	82780495;82780796	-	82774790	82780796	cassetteExon	0.5	100	100	ENSMUST00000146053.8	ENSMUSG00000018841.18	Rad51d	chr11	protein_coding	RAD51 paralog D
chr11	82774790;82780636	82780518;82780796	-	82774790	82780796	cassetteExon	0.5	100	100	ENSMUST00000146053.8	ENSMUSG00000018841.18	Rad51d	chr11	protein_coding	RAD51 paralog D
chr11	82774790	82780495	-	82774790	82780518	A5SS	0.33	50	50	ENSMUST00000018985.15	ENSMUSG00000018841.18	Rad51d	chr11	protein_coding	RAD51 paralog D
chr11	82770178	82773713	-	82770178;82772687	82772597;82773713	ES	0.5	50	50	ENSMUST00000135963.8	ENSMUSG00000018841.18	Rad51d	chr11	protein_coding	RAD51 paralog D
chr11	82770178;82772687	82772427;82773713	-	82770178	82773713	cassetteExon	0.5	100	100	ENSMUST00000021033.16	ENSMUSG00000018841.18	Rad51d	chr11	protein_coding	RAD51 paralog D
chr11	82793959	82794916	-	82794023	82794916	A3SS	0.5	50	50	ENSMUST00000103213.10	ENSMUSG00000020692.15	Nle1	chr11	protein_coding	notchless homolog 1
chr11	82797443	82798379	-	82797330	82798379	A3SS	0.5	50	50	ENSMUST00000103213.10	ENSMUSG00000020692.15	Nle1	chr11	protein_coding	notchless homolog 1
chr11	82802185	82802506	+	82802079	82802506	A5SS	0.5	50	50	ENSMUST00000108160.8	ENSMUSG00000018845.15	Unc45b	chr11	protein_coding	unc-45 myosin chaperone B
chr11	82819899	82820247	+	82819905	82820247	A5SS	0.5	50	50	ENSMUST00000108160.8	ENSMUSG00000018845.15	Unc45b	chr11	protein_coding	unc-45 myosin chaperone B
chr11	82824478	82824658	+	82820387	82824658	A5SS	0.5	50	50	ENSMUST00000108160.8	ENSMUSG00000018845.15	Unc45b	chr11	protein_coding	unc-45 myosin chaperone B
chr11	82851312	82851431	-	82834472	82851431	A3SS	0.5	50	50	ENSMUST00000127074.2	ENSMUSG00000086327.3	Slfn5os	chr11	lncRNA	schlafen 5, opposite strand
chr11	82843021;82845608	82845543;82847089	+	82843021	82847089	cassetteExon	0.5	100	100	ENSMUST00000108158.9	ENSMUSG00000054404.14	Slfn5	chr11	protein_coding	schlafen 5
chr11	82843021	82847089	+	82845608	82847089	5pMXE	0.5	50	50	ENSMUST00000108157.2	ENSMUSG00000054404.14	Slfn5	chr11	protein_coding	schlafen 5
chr11	82879134;82881883	82881768;82882414	-	82879134	82882414	cassetteExon	0.5	100	100	ENSMUST00000038211.13	ENSMUSG00000069793.13	Slfn9	chr11	protein_coding	schlafen 9
chr11	82879134	82882414	-	82879134	82881768	5pMXE	0.5	50	50	ENSMUST00000138797.2	ENSMUSG00000069793.13	Slfn9	chr11	protein_coding	schlafen 9
chr11	82895606	82904191	-	82894715	82904191	A3SS	0.5	50	50	ENSMUST00000215239.2	ENSMUSG00000035208.17	Slfn8	chr11	protein_coding	schlafen 8
chr11	82895606	82907479	-	82904325	82907479	A3SS&ES	0.5	50	50	ENSMUST00000215239.2	ENSMUSG00000035208.17	Slfn8	chr11	protein_coding	schlafen 8
chr11	82894715	82894883	-	82894715	82904191	A5SS	0.5	50	50	ENSMUST00000215239.2	ENSMUSG00000035208.17	Slfn8	chr11	protein_coding	schlafen 8
chr11	82908548;82910854	82910739;82911403	-	82908548	82911403	cassetteExon	0.5	100	100	ENSMUST00000108152.9	ENSMUSG00000035208.17	Slfn8	chr11	protein_coding	schlafen 8
chr11	82894715	82904191	-	82894715;82895606	82894883;82904191	ES	0.5	50	50	ENSMUST00000038141.15	ENSMUSG00000035208.17	Slfn8	chr11	protein_coding	schlafen 8
chr11	82895606	82907479	-	82895606;82904325	82904191;82907479	ES	0.5	50	50	ENSMUST00000038141.15	ENSMUSG00000035208.17	Slfn8	chr11	protein_coding	schlafen 8
chr11	82908548	82911403	-	82908548	82910739	5pMXE	0.5	50	50	ENSMUST00000130822.3	ENSMUSG00000035208.17	Slfn8	chr11	protein_coding	schlafen 8
chr11	83066470	83066897	+	83066470	83066654	A3SS&ES	0.5	50	50	ENSMUST00000000208.13	ENSMUSG00000000204.17	Slfn4	chr11	protein_coding	schlafen 4
chr11	83070582	83076094	+	83070582	83079489	A3SS	0.5	50	50	ENSMUST00000215472.2	ENSMUSG00000000204.17	Slfn4	chr11	protein_coding	schlafen 4
chr11	83078390	83079489	+	83070582	83079489	A5SS	0.5	50	50	ENSMUST00000215472.2	ENSMUSG00000000204.17	Slfn4	chr11	protein_coding	schlafen 4
chr11	83082234;83085035	83084869;83103370	+	83082234	83103370	cassetteExon	0.5	100	100	ENSMUST00000019130.8	ENSMUSG00000018986.11	Slfn3	chr11	protein_coding	schlafen 3
chr11	83101049	83103370	+	83082234	83103370	A5SS	0.33	50	50	ENSMUST00000019130.8	ENSMUSG00000018986.11	Slfn3	chr11	protein_coding	schlafen 3
chr11	83101049	83103370	+	83085035	83103370	A5SS	0.33	50	50	ENSMUST00000214041.2	ENSMUSG00000018986.11	Slfn3	chr11	protein_coding	schlafen 3
chr11	83114477;83115136	83115036;83115278	+	83114477	83115278	cassetteExon	0.5	100	100	ENSMUST00000145461.8	ENSMUSG00000087107.9	AI662270	chr11	lncRNA	expressed sequence AI662270
chr11	83114477	83115278	+	83115136	83115278	5pMXE	0.5	50	50	ENSMUST00000142709.2	ENSMUSG00000087107.9	AI662270	chr11	lncRNA	expressed sequence AI662270
chr11	83134822	83150870	+	83134822	83145103	3pMXE	0.5	50	50	ENSMUST00000216233.2	ENSMUSG00000083161.3	Gm11427	chr11	transcribed_unprocessed_pseudogene	predicted gene 11427
chr11	83116511	83132361	+	83116672	83132361	A5SS	0.5	50	50	ENSMUST00000216233.2	ENSMUSG00000083161.3	Gm11427	chr11	transcribed_unprocessed_pseudogene	predicted gene 11427
chr11	83150064	83150870	+	83134822	83150870	A5SS	0.5	50	50	ENSMUST00000214346.2	ENSMUSG00000083161.3	Gm11427	chr11	transcribed_unprocessed_pseudogene	predicted gene 11427
chr11	83146142	83149951	+	83146142	83150872	A3SS	0.5	50	50	ENSMUST00000117952.3	ENSMUSG00000083161.3	Gm11427	chr11	transcribed_unprocessed_pseudogene	predicted gene 11427
chr11	83182659	83182800	+	83182659	83182793	A3SS	0.5	50	50	ENSMUST00000177150.2	ENSMUSG00000093483.2	AA465934	chr11	lncRNA	expressed sequence AA465934
chr11	83182893	83185341	+	83182923	83185341	A5SS	0.5	50	50	ENSMUST00000177150.2	ENSMUSG00000093483.2	AA465934	chr11	lncRNA	expressed sequence AA465934
chr11	83189033	83189142	-	83188867	83189142	A3SS	0.5	50	50	ENSMUST00000018877.9	ENSMUSG00000018733.11	Pex12	chr11	protein_coding	peroxisomal biogenesis factor 12
chr11	83189379	83189538	-	83189379	83189666	A5SS	0.25	50	50	ENSMUST00000018877.9	ENSMUSG00000018733.11	Pex12	chr11	protein_coding	peroxisomal biogenesis factor 12
chr11	83189379	83189543	-	83189379	83189666	A5SS	0.25	50	50	ENSMUST00000018877.9	ENSMUSG00000018733.11	Pex12	chr11	protein_coding	peroxisomal biogenesis factor 12
chr11	83189379	83189738	-	83189379	83189666	A5SS	0.25	50	50	ENSMUST00000018877.9	ENSMUSG00000018733.11	Pex12	chr11	protein_coding	peroxisomal biogenesis factor 12
chr11	83189379	83189738	-	83189379	83189543	5pMXE	0.25	50	50	ENSMUST00000175741.8	ENSMUSG00000018733.11	Pex12	chr11	protein_coding	peroxisomal biogenesis factor 12
chr11	83189379	83189538	-	83189379	83189543	A5SS	0.25	50	50	ENSMUST00000175741.8	ENSMUSG00000018733.11	Pex12	chr11	protein_coding	peroxisomal biogenesis factor 12
chr11	83189379	83189738	-	83189379	83189538	A5SS	0.25	50	50	ENSMUST00000108146.8	ENSMUSG00000018733.11	Pex12	chr11	protein_coding	peroxisomal biogenesis factor 12
chr11	83189373	83189738	-	83189379	83189738	A3SS	0.5	50	50	ENSMUST00000176374.2	ENSMUSG00000018733.11	Pex12	chr11	protein_coding	peroxisomal biogenesis factor 12
chr11	83212900	83215451	+	83212900	83215337	A3SS	0.5	50	50	ENSMUST00000176944.8	ENSMUSG00000035152.15	Ap2b1	chr11	protein_coding	adaptor-related protein complex 2, beta 1 subunit
chr11	83193663	83199041	+	83189879	83199041	A5SS	0.33	50	50	ENSMUST00000176944.8	ENSMUSG00000035152.15	Ap2b1	chr11	protein_coding	adaptor-related protein complex 2, beta 1 subunit
chr11	83195916	83199041	+	83189879	83199041	A5SS	0.33	50	50	ENSMUST00000176944.8	ENSMUSG00000035152.15	Ap2b1	chr11	protein_coding	adaptor-related protein complex 2, beta 1 subunit
chr11	83241997	83256473	+	83241997;83255662	83255621;83256473	ES	0.5	50	50	ENSMUST00000018875.13	ENSMUSG00000035152.15	Ap2b1	chr11	protein_coding	adaptor-related protein complex 2, beta 1 subunit
chr11	83195916	83199041	+	83193663	83199041	A5SS	0.33	50	50	ENSMUST00000018875.13	ENSMUSG00000035152.15	Ap2b1	chr11	protein_coding	adaptor-related protein complex 2, beta 1 subunit
chr11	83308802	83309291	+	83308802	83309386	A3SS	0.5	50	50	ENSMUST00000021022.10	ENSMUSG00000020684.15	Rasl10b	chr11	protein_coding	RAS-like, family 10, member B
chr11	83300707	83303304	+	83300201	83303304	A5SS	0.33	50	50	ENSMUST00000021022.10	ENSMUSG00000020684.15	Rasl10b	chr11	protein_coding	RAS-like, family 10, member B
chr11	83301417	83303304	+	83300201	83303304	A5SS	0.33	50	50	ENSMUST00000021022.10	ENSMUSG00000020684.15	Rasl10b	chr11	protein_coding	RAS-like, family 10, member B
chr11	83301417	83303304	+	83300707	83303304	A5SS	0.33	50	50	ENSMUST00000175848.8	ENSMUSG00000020684.15	Rasl10b	chr11	protein_coding	RAS-like, family 10, member B
chr11	83330978	83331113	+	83328583	83331113	A5SS	0.5	50	50	ENSMUST00000037378.6	ENSMUSG00000035085.6	1700020L24Rik	chr11	protein_coding	RIKEN cDNA 1700020L24 gene
chr11	83334101	83334585	-	83333771	83334585	A3SS	0.5	50	50	ENSMUST00000103209.10	ENSMUSG00000020682.18	Mmp28	chr11	protein_coding	matrix metallopeptidase 28 (epilysin)
chr11	83334722	83335037	-	83334680	83335037	A3SS	0.33	50	50	ENSMUST00000103209.10	ENSMUSG00000020682.18	Mmp28	chr11	protein_coding	matrix metallopeptidase 28 (epilysin)
chr11	83334752	83335037	-	83334680	83335037	A3SS	0.33	50	50	ENSMUST00000103209.10	ENSMUSG00000020682.18	Mmp28	chr11	protein_coding	matrix metallopeptidase 28 (epilysin)
chr11	83342665	83353574	-	83342565	83353574	A3SS	0.5	50	50	ENSMUST00000103209.10	ENSMUSG00000020682.18	Mmp28	chr11	protein_coding	matrix metallopeptidase 28 (epilysin)
chr11	83334752	83335037	-	83334722	83335037	A3SS	0.33	50	50	ENSMUST00000021020.13	ENSMUSG00000020682.18	Mmp28	chr11	protein_coding	matrix metallopeptidase 28 (epilysin)
chr11	83364032	83364434	+	83364032	83372760	A3SS	0.5	50	50	ENSMUST00000134185.8	ENSMUSG00000020680.16	Taf15	chr11	protein_coding	TATA-box binding protein associated factor 15
chr11	83372007	83372760	+	83364032	83372760	A5SS	0.5	50	50	ENSMUST00000134185.8	ENSMUSG00000020680.16	Taf15	chr11	protein_coding	TATA-box binding protein associated factor 15
chr11	83467272	83467930	-	83467272	83469215	A5SS	0.5	50	50	ENSMUST00000019266.6	ENSMUSG00000019122.9	Ccl9	chr11	protein_coding	chemokine (C-C motif) ligand 9
chr11	83600825;83601054	83600925;83601982	+	83600825	83601982	cassetteExon	0.5	100	100	ENSMUST00000001009.14	ENSMUSG00000000983.14	Wfdc18	chr11	protein_coding	WAP four-disulfide core domain 18
chr11	83667562	83668083	+	83667562	83668064	A3SS	0.5	50	50	ENSMUST00000001002.8	ENSMUSG00000000976.14	Heatr6	chr11	protein_coding	HEAT repeat containing 6
chr11	83644971	83646536	+	83644767	83646536	A5SS	0.33	50	50	ENSMUST00000001002.8	ENSMUSG00000000976.14	Heatr6	chr11	protein_coding	HEAT repeat containing 6
chr11	83645103	83646536	+	83644767	83646536	A5SS	0.33	50	50	ENSMUST00000001002.8	ENSMUSG00000000976.14	Heatr6	chr11	protein_coding	HEAT repeat containing 6
chr11	83645103	83646536	+	83644971	83646536	A5SS	0.33	50	50	ENSMUST00000125831.8	ENSMUSG00000000976.14	Heatr6	chr11	protein_coding	HEAT repeat containing 6
chr11	83743115	83746730	+	83742218	83746730	A5SS	0.33	50	50	ENSMUST00000135975.3	ENSMUSG00000020679.12	Hnf1b	chr11	protein_coding	HNF1 homeobox B
chr11	83743940	83746730	+	83742218	83746730	A5SS	0.33	50	50	ENSMUST00000135975.3	ENSMUSG00000020679.12	Hnf1b	chr11	protein_coding	HNF1 homeobox B
chr11	83746929	83752620	+	83746929	83752542	A3SS	0.5	50	50	ENSMUST00000021016.10	ENSMUSG00000020679.12	Hnf1b	chr11	protein_coding	HNF1 homeobox B
chr11	83743940	83746730	+	83743115	83746730	A5SS	0.33	50	50	ENSMUST00000146786.8	ENSMUSG00000020679.12	Hnf1b	chr11	protein_coding	HNF1 homeobox B
chr11	83842326	83842938	+	83842188	83842938	A5SS	0.5	50	50	ENSMUST00000049257.8	ENSMUSG00000020677.8	Ddx52	chr11	protein_coding	DExD box helicase 52
chr11	83873133	83878739	+	83873133;83877873	83877640;83878739	ES	0.25	50	50	ENSMUST00000049714.15	ENSMUSG00000034940.16	Synrg	chr11	protein_coding	synergin, gamma
chr11	83930147	83931623	+	83930147;83930517	83930482;83931623	ES	0.5	50	50	ENSMUST00000049714.15	ENSMUSG00000034940.16	Synrg	chr11	protein_coding	synergin, gamma
chr11	83873133;83876377	83876075;83877640	+	83873133	83877640	cassetteExon	0.5	100	100	ENSMUST00000049714.15	ENSMUSG00000034940.16	Synrg	chr11	protein_coding	synergin, gamma
chr11	83873133;83876377	83876075;83878739	+	83873133;83877873	83877640;83878739	MXE	0.5	100	100	ENSMUST00000049714.15	ENSMUSG00000034940.16	Synrg	chr11	protein_coding	synergin, gamma
chr11	83862418	83867909	+	83862418	83867906	A3SS	0.5	50	50	ENSMUST00000049714.15	ENSMUSG00000034940.16	Synrg	chr11	protein_coding	synergin, gamma
chr11	83900376	83910417	+	83900376	83910186	A3SS	0.5	50	50	ENSMUST00000049714.15	ENSMUSG00000034940.16	Synrg	chr11	protein_coding	synergin, gamma
chr11	83877677	83878739	+	83877873	83878739	A5SS	0.25	50	50	ENSMUST00000049714.15	ENSMUSG00000034940.16	Synrg	chr11	protein_coding	synergin, gamma
chr11	83880661	83881521	+	83880702	83881521	A5SS	0.5	50	50	ENSMUST00000049714.15	ENSMUSG00000034940.16	Synrg	chr11	protein_coding	synergin, gamma
chr11	83873133;83876377	83876075;83878739	+	83873133	83878739	cassetteExon	0.5	100	100	ENSMUST00000092834.12	ENSMUSG00000034940.16	Synrg	chr11	protein_coding	synergin, gamma
chr11	83873133;83877677	83877640;83878739	+	83873133	83878739	cassetteExon	0.5	100	100	ENSMUST00000092834.12	ENSMUSG00000034940.16	Synrg	chr11	protein_coding	synergin, gamma
chr11	83876377	83878739	+	83876377;83877873	83877640;83878739	ES	0.25	50	50	ENSMUST00000183456.8	ENSMUSG00000034940.16	Synrg	chr11	protein_coding	synergin, gamma
chr11	83876377	83878739	+	83876377;83877677	83877640;83878739	ES	0.25	50	50	ENSMUST00000148901.2	ENSMUSG00000034940.16	Synrg	chr11	protein_coding	synergin, gamma
chr11	83873133;83877677	83877640;83878739	+	83873133;83876377	83876075;83878739	MXE	0.5	100	100	ENSMUST00000138676.2	ENSMUSG00000034940.16	Synrg	chr11	protein_coding	synergin, gamma
chr11	83930147	83931623	+	83930147	83930482	3pMXE	0.5	50	50	ENSMUST00000132887.2	ENSMUSG00000034940.16	Synrg	chr11	protein_coding	synergin, gamma
chr11	83941746	83959307	-	83941746	83959096	5pMXE	0.33	50	50	ENSMUST00000100705.11	ENSMUSG00000018648.16	Dusp14	chr11	protein_coding	dual specificity phosphatase 14
chr11	83941746	83957811	-	83941746	83959096	A5SS	0.33	50	50	ENSMUST00000100705.11	ENSMUSG00000018648.16	Dusp14	chr11	protein_coding	dual specificity phosphatase 14
chr11	83959406	83959898	-	83959406	83959516	5pMXE	0.5	50	50	ENSMUST00000018792.12	ENSMUSG00000018648.16	Dusp14	chr11	protein_coding	dual specificity phosphatase 14
chr11	83941746	83957811	-	83941746	83959307	A5SS	0.33	50	50	ENSMUST00000018792.12	ENSMUSG00000018648.16	Dusp14	chr11	protein_coding	dual specificity phosphatase 14
chr11	83972937	83973705	-	83972937	83975540	A5SS	0.5	50	50	ENSMUST00000018795.13	ENSMUSG00000018651.15	Tada2a	chr11	protein_coding	transcriptional adaptor 2A
chr11	83975583	83976502	-	83975583	83976465	A5SS	0.5	50	50	ENSMUST00000018795.13	ENSMUSG00000018651.15	Tada2a	chr11	protein_coding	transcriptional adaptor 2A
chr11	84064381	84083905	+	84020956	84083905	A5SS	0.25	50	50	ENSMUST00000133811.3	ENSMUSG00000020532.19	Acaca	chr11	protein_coding	acetyl-Coenzyme A carboxylase alpha
chr11	84064381	84086264	+	84083951	84086264	A5SS&ES	0.33	50	50	ENSMUST00000133811.3	ENSMUSG00000020532.19	Acaca	chr11	protein_coding	acetyl-Coenzyme A carboxylase alpha
chr11	84070752	84083905	+	84020956	84083905	A5SS	0.25	50	50	ENSMUST00000133811.3	ENSMUSG00000020532.19	Acaca	chr11	protein_coding	acetyl-Coenzyme A carboxylase alpha
chr11	84070752	84086264	+	84083951	84086264	A5SS&ES	0.33	50	50	ENSMUST00000133811.3	ENSMUSG00000020532.19	Acaca	chr11	protein_coding	acetyl-Coenzyme A carboxylase alpha
chr11	84071422	84083905	+	84020956	84083905	A5SS	0.25	50	50	ENSMUST00000133811.3	ENSMUSG00000020532.19	Acaca	chr11	protein_coding	acetyl-Coenzyme A carboxylase alpha
chr11	84064381	84086264	+	84064381;84083951	84083905;84086264	ES	0.33	50	50	ENSMUST00000103201.8	ENSMUSG00000020532.19	Acaca	chr11	protein_coding	acetyl-Coenzyme A carboxylase alpha
chr11	84171336	84183717	+	84171336;84181137	84181114;84183717	ES	0.5	50	50	ENSMUST00000103201.8	ENSMUSG00000020532.19	Acaca	chr11	protein_coding	acetyl-Coenzyme A carboxylase alpha
chr11	84070752	84083905	+	84064381	84083905	A5SS	0.25	50	50	ENSMUST00000103201.8	ENSMUSG00000020532.19	Acaca	chr11	protein_coding	acetyl-Coenzyme A carboxylase alpha
chr11	84071422	84083905	+	84064381	84083905	A5SS	0.25	50	50	ENSMUST00000103201.8	ENSMUSG00000020532.19	Acaca	chr11	protein_coding	acetyl-Coenzyme A carboxylase alpha
chr11	84070752	84086264	+	84064381	84086264	A5SS	0.33	50	50	ENSMUST00000183548.3	ENSMUSG00000020532.19	Acaca	chr11	protein_coding	acetyl-Coenzyme A carboxylase alpha
chr11	84070752	84086264	+	84070752;84083951	84083905;84086264	ES	0.5	50	50	ENSMUST00000137500.9	ENSMUSG00000020532.19	Acaca	chr11	protein_coding	acetyl-Coenzyme A carboxylase alpha
chr11	84070752;84071422	84071364;84083905	+	84070752	84083905	cassetteExon	0.5	100	100	ENSMUST00000137500.9	ENSMUSG00000020532.19	Acaca	chr11	protein_coding	acetyl-Coenzyme A carboxylase alpha
chr11	84070752	84071364	+	84070752	84086264	A3SS	0.33	50	50	ENSMUST00000130012.9	ENSMUSG00000020532.19	Acaca	chr11	protein_coding	acetyl-Coenzyme A carboxylase alpha
chr11	84363992	84382289	-	84363992	84400485	A5SS	0.5	50	50	ENSMUST00000018841.3	ENSMUSG00000018697.15	Aatf	chr11	protein_coding	apoptosis antagonizing transcription factor
chr11	84413114	84413456	-	84413114	84414832	A5SS	0.5	50	50	ENSMUST00000018842.14	ENSMUSG00000018698.16	Lhx1	chr11	protein_coding	LIM homeobox protein 1
chr11	84416574;84424282	84424209;84425306	+	84416574	84425306	cassetteExon	0.5	100	100	ENSMUST00000134800.8	ENSMUSG00000087211.8	Lhx1os	chr11	lncRNA	LIM homeobox 1, opposite strand
chr11	84425486	84425942	+	84425386	84425942	A5SS	0.5	50	50	ENSMUST00000134800.8	ENSMUSG00000087211.8	Lhx1os	chr11	lncRNA	LIM homeobox 1, opposite strand
chr11	84716347	84719577	-	84716403	84719577	A3SS	0.5	50	50	ENSMUST00000047560.8	ENSMUSG00000034449.8	Dhrs11	chr11	protein_coding	dehydrogenase/reductase (SDR family) member 11
chr11	84744993;84745206	84745081;84749266	-	84744993	84749266	cassetteExon	0.5	100	100	ENSMUST00000172405.8	ENSMUSG00000020530.15	Ggnbp2	chr11	protein_coding	gametogenetin binding protein 2
chr11	84727361	84727425	-	84727339	84727425	A3SS	0.5	50	50	ENSMUST00000172405.8	ENSMUSG00000020530.15	Ggnbp2	chr11	protein_coding	gametogenetin binding protein 2
chr11	84743362	84744880	-	84732450	84744880	A3SS	0.5	50	50	ENSMUST00000172405.8	ENSMUSG00000020530.15	Ggnbp2	chr11	protein_coding	gametogenetin binding protein 2
chr11	84760624	84760703	-	84753144	84760703	A3SS	0.5	50	50	ENSMUST00000172405.8	ENSMUSG00000020530.15	Ggnbp2	chr11	protein_coding	gametogenetin binding protein 2
chr11	84728814	84730867	-	84728814	84730807	A5SS	0.5	50	50	ENSMUST00000172405.8	ENSMUSG00000020530.15	Ggnbp2	chr11	protein_coding	gametogenetin binding protein 2
chr11	84731261	84732247	-	84731261	84732241	A5SS	0.5	50	50	ENSMUST00000172405.8	ENSMUSG00000020530.15	Ggnbp2	chr11	protein_coding	gametogenetin binding protein 2
chr11	84760898	84761289	-	84760898	84761464	A5SS	0.25	50	50	ENSMUST00000172405.8	ENSMUSG00000020530.15	Ggnbp2	chr11	protein_coding	gametogenetin binding protein 2
chr11	84760898	84761431	-	84760898	84761464	A5SS	0.25	50	50	ENSMUST00000172405.8	ENSMUSG00000020530.15	Ggnbp2	chr11	protein_coding	gametogenetin binding protein 2
chr11	84760898	84761516	-	84760898	84761464	A5SS	0.25	50	50	ENSMUST00000172405.8	ENSMUSG00000020530.15	Ggnbp2	chr11	protein_coding	gametogenetin binding protein 2
chr11	84760898	84761289	-	84760898	84761431	A5SS	0.25	50	50	ENSMUST00000108081.9	ENSMUSG00000020530.15	Ggnbp2	chr11	protein_coding	gametogenetin binding protein 2
chr11	84760898	84761516	-	84760898	84761431	A5SS	0.25	50	50	ENSMUST00000108081.9	ENSMUSG00000020530.15	Ggnbp2	chr11	protein_coding	gametogenetin binding protein 2
chr11	84760898	84761516	-	84730832	84761516	A3SS	0.5	50	50	ENSMUST00000170741.2	ENSMUSG00000020530.15	Ggnbp2	chr11	protein_coding	gametogenetin binding protein 2
chr11	84760898	84761516	-	84760898	84761289	5pMXE	0.25	50	50	ENSMUST00000166425.2	ENSMUSG00000020530.15	Ggnbp2	chr11	protein_coding	gametogenetin binding protein 2
chr11	84769338	84771054	-	84769338	84770545	5pMXE	0.5	50	50	ENSMUST00000067058.3	ENSMUSG00000045140.9	Pigw	chr11	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class W
chr11	84783034	84785376	+	84783034;84784220	84784151;84785376	ES	0.5	50	50	ENSMUST00000093969.11	ENSMUSG00000020527.15	Myo19	chr11	protein_coding	myosin XIX
chr11	84786190	84787947	+	84786190;84786380	84786304;84787947	ES	0.5	50	50	ENSMUST00000093969.11	ENSMUSG00000020527.15	Myo19	chr11	protein_coding	myosin XIX
chr11	84788037;84788289	84788185;84788375	+	84788037	84788375	cassetteExon	0.5	100	100	ENSMUST00000093969.11	ENSMUSG00000020527.15	Myo19	chr11	protein_coding	myosin XIX
chr11	84771337	84771616	+	84771337	84773412	A3SS	0.5	50	50	ENSMUST00000093969.11	ENSMUSG00000020527.15	Myo19	chr11	protein_coding	myosin XIX
chr11	84802720	84804048	-	84802474	84804048	A3SS	0.5	50	50	ENSMUST00000103195.5	ENSMUSG00000020526.13	Znhit3	chr11	protein_coding	zinc finger, HIT type 3
chr11	84804262	84805037	-	84804128	84805037	A3SS	0.5	50	50	ENSMUST00000103195.5	ENSMUSG00000020526.13	Znhit3	chr11	protein_coding	zinc finger, HIT type 3
chr11	84805209	84806925	-	84805111	84806925	A3SS	0.5	50	50	ENSMUST00000103195.5	ENSMUSG00000020526.13	Znhit3	chr11	protein_coding	zinc finger, HIT type 3
chr11	84848767	84853212	+	84848876	84853212	A5SS	0.33	50	50	ENSMUST00000139416.2	ENSMUSG00000000805.19	Car4	chr11	protein_coding	carbonic anhydrase 4
chr11	84849099	84853212	+	84848876	84853212	A5SS	0.33	50	50	ENSMUST00000139416.2	ENSMUSG00000000805.19	Car4	chr11	protein_coding	carbonic anhydrase 4
chr11	84848767	84852433	+	84848767	84853212	A3SS	0.5	50	50	ENSMUST00000103194.10	ENSMUSG00000000805.19	Car4	chr11	protein_coding	carbonic anhydrase 4
chr11	84855427	84855554	+	84855427	84855539	A3SS	0.5	50	50	ENSMUST00000103194.10	ENSMUSG00000000805.19	Car4	chr11	protein_coding	carbonic anhydrase 4
chr11	84849099	84853212	+	84848767	84853212	A5SS	0.33	50	50	ENSMUST00000103194.10	ENSMUSG00000000805.19	Car4	chr11	protein_coding	carbonic anhydrase 4
chr11	84877409	84879160	-	84877409;84878187	84878095;84879160	ES	0.5	50	50	ENSMUST00000108075.9	ENSMUSG00000000804.15	Usp32	chr11	protein_coding	ubiquitin specific peptidase 32
chr11	84908667	84912982	-	84908667;84910702	84910591;84912982	ES	0.5	50	50	ENSMUST00000108075.9	ENSMUSG00000000804.15	Usp32	chr11	protein_coding	ubiquitin specific peptidase 32
chr11	84930167	84933314	-	84930167;84930996	84930821;84933314	ES	0.5	50	50	ENSMUST00000108075.9	ENSMUSG00000000804.15	Usp32	chr11	protein_coding	ubiquitin specific peptidase 32
chr11	84994852	85030924	-	84994852	85030537	5pMXE	0.5	50	50	ENSMUST00000108075.9	ENSMUSG00000000804.15	Usp32	chr11	protein_coding	ubiquitin specific peptidase 32
chr11	84991120	84994725	-	84974720	84994725	A3SS	0.5	50	50	ENSMUST00000108075.9	ENSMUSG00000000804.15	Usp32	chr11	protein_coding	ubiquitin specific peptidase 32
chr11	84923049	84925097	-	84923049	84927348	A5SS	0.5	50	50	ENSMUST00000108075.9	ENSMUSG00000000804.15	Usp32	chr11	protein_coding	ubiquitin specific peptidase 32
chr11	84930167	84933314	-	84930167	84930821	5pMXE	0.5	50	50	ENSMUST00000174602.2	ENSMUSG00000000804.15	Usp32	chr11	protein_coding	ubiquitin specific peptidase 32
chr11	85063761;85064189	85064014;85064843	+	85063761	85064843	cassetteExon	0.5	100	100	ENSMUST00000100681.8	ENSMUSG00000018479.13	1700125H20Rik	chr11	protein_coding	RIKEN cDNA 1700125H20 gene
chr11	85062053	85063660	+	85061258	85063660	A5SS	0.5	50	50	ENSMUST00000100681.8	ENSMUSG00000018479.13	1700125H20Rik	chr11	protein_coding	RIKEN cDNA 1700125H20 gene
chr11	85203263	85217690	+	85202749	85217690	A5SS	0.5	50	50	ENSMUST00000020835.16	ENSMUSG00000020525.18	Ppm1d	chr11	protein_coding	protein phosphatase 1D magnesium-dependent, delta isoform
chr11	85244059	85245714	+	85244059;85245487	85245420;85245714	ES	0.33	50	50	ENSMUST00000108056.8	ENSMUSG00000059439.16	Bcas3	chr11	protein_coding	breast carcinoma amplified sequence 3
chr11	85250505;85251888	85251850;85256378	+	85250505	85256378	cassetteExon	0.5	100	100	ENSMUST00000108056.8	ENSMUSG00000059439.16	Bcas3	chr11	protein_coding	breast carcinoma amplified sequence 3
chr11	85386787	85387699	+	85386787	85400254	A3SS	0.5	50	50	ENSMUST00000108056.8	ENSMUSG00000059439.16	Bcas3	chr11	protein_coding	breast carcinoma amplified sequence 3
chr11	85245505	85245714	+	85245487	85245714	A5SS	0.33	50	50	ENSMUST00000108056.8	ENSMUSG00000059439.16	Bcas3	chr11	protein_coding	breast carcinoma amplified sequence 3
chr11	85383697	85386654	+	85373562	85386654	A5SS	0.5	50	50	ENSMUST00000108056.8	ENSMUSG00000059439.16	Bcas3	chr11	protein_coding	breast carcinoma amplified sequence 3
chr11	85244059	85245714	+	85244059;85245505	85245420;85245714	ES	0.33	50	50	ENSMUST00000108061.8	ENSMUSG00000059439.16	Bcas3	chr11	protein_coding	breast carcinoma amplified sequence 3
chr11	85422769	85445016	+	85422769;85434798	85434754;85445016	ES	0.5	50	50	ENSMUST00000108061.8	ENSMUSG00000059439.16	Bcas3	chr11	protein_coding	breast carcinoma amplified sequence 3
chr11	85692778	85712848	+	85692778;85704891	85704826;85712848	ES	0.33	50	50	ENSMUST00000108061.8	ENSMUSG00000059439.16	Bcas3	chr11	protein_coding	breast carcinoma amplified sequence 3
chr11	85704891	85716028	+	85704891;85712938	85712848;85716028	ES	0.33	50	50	ENSMUST00000108061.8	ENSMUSG00000059439.16	Bcas3	chr11	protein_coding	breast carcinoma amplified sequence 3
chr11	85474820	85493572	+	85474820	85692611	A3SS	0.5	50	50	ENSMUST00000108061.8	ENSMUSG00000059439.16	Bcas3	chr11	protein_coding	breast carcinoma amplified sequence 3
chr11	85531602	85692611	+	85474820	85692611	A5SS	0.5	50	50	ENSMUST00000108061.8	ENSMUSG00000059439.16	Bcas3	chr11	protein_coding	breast carcinoma amplified sequence 3
chr11	85712322	85712848	+	85704891	85712848	A5SS	0.33	50	50	ENSMUST00000108061.8	ENSMUSG00000059439.16	Bcas3	chr11	protein_coding	breast carcinoma amplified sequence 3
chr11	85692778;85704891	85704826;85716028	+	85692778	85716028	cassetteExon	0.5	100	100	ENSMUST00000092821.10	ENSMUSG00000059439.16	Bcas3	chr11	protein_coding	breast carcinoma amplified sequence 3
chr11	85692778;85712938	85712848;85716028	+	85692778	85716028	cassetteExon	0.5	100	100	ENSMUST00000092821.10	ENSMUSG00000059439.16	Bcas3	chr11	protein_coding	breast carcinoma amplified sequence 3
chr11	85692778;85712938	85712848;85716028	+	85692778;85704891	85704826;85716028	MXE	0.5	100	100	ENSMUST00000142596.8	ENSMUSG00000059439.16	Bcas3	chr11	protein_coding	breast carcinoma amplified sequence 3
chr11	85712322	85712848	+	85692778	85712848	A5SS	0.33	50	50	ENSMUST00000149662.2	ENSMUSG00000059439.16	Bcas3	chr11	protein_coding	breast carcinoma amplified sequence 3
chr11	85692778	85716028	+	85712938	85716028	5pMXE	0.33	50	50	ENSMUST00000140562.2	ENSMUSG00000059439.16	Bcas3	chr11	protein_coding	breast carcinoma amplified sequence 3
chr11	85704891	85716028	+	85712938	85716028	5pMXE	0.33	50	50	ENSMUST00000140562.2	ENSMUSG00000059439.16	Bcas3	chr11	protein_coding	breast carcinoma amplified sequence 3
chr11	85597706	85610523	-	85600041	85610523	A3SS	0.5	50	50	ENSMUST00000151652.8	ENSMUSG00000086199.8	Bcas3os1	chr11	lncRNA	breast carcinoma amplified sequence 3, opposite strand 1
chr11	85595644	85596856	-	85595644	85597021	A5SS	0.5	50	50	ENSMUST00000151652.8	ENSMUSG00000086199.8	Bcas3os1	chr11	lncRNA	breast carcinoma amplified sequence 3, opposite strand 1
chr11	85692769	85694863	-	85692769	85696217	A5SS	0.5	50	50	ENSMUST00000140673.8	ENSMUSG00000087013.8	2610027K06Rik	chr11	lncRNA	RIKEN cDNA 2610027K06 gene
chr11	85787836	85789319	+	85781777	85789319	A5SS	0.5	50	50	ENSMUST00000108047.8	ENSMUSG00000000094.13	Tbx4	chr11	protein_coding	T-box 4
chr11	86086831	86088695	-	86083814	86088695	A3SS	0.33	50	50	ENSMUST00000044423.4	ENSMUSG00000034329.17	Brip1	chr11	protein_coding	BRCA1 interacting protein C-terminal helicase 1
chr11	86087125	86088695	-	86083814	86088695	A3SS	0.33	50	50	ENSMUST00000044423.4	ENSMUSG00000034329.17	Brip1	chr11	protein_coding	BRCA1 interacting protein C-terminal helicase 1
chr11	86089820	86091900	-	86089820	86091935	A5SS	0.5	50	50	ENSMUST00000044423.4	ENSMUSG00000034329.17	Brip1	chr11	protein_coding	BRCA1 interacting protein C-terminal helicase 1
chr11	86086831	86088695	-	86087125	86088695	A3SS&ES	0.5	50	50	ENSMUST00000149748.8	ENSMUSG00000034329.17	Brip1	chr11	protein_coding	BRCA1 interacting protein C-terminal helicase 1
chr11	86115970;86116936	86116868;86117464	-	86115970	86117464	cassetteExon	0.5	100	100	ENSMUST00000018212.13	ENSMUSG00000018068.14	Ints2	chr11	protein_coding	integrator complex subunit 2
chr11	86147155;86147323	86147248;86148030	-	86147155	86148030	cassetteExon	0.5	100	100	ENSMUST00000018212.13	ENSMUSG00000018068.14	Ints2	chr11	protein_coding	integrator complex subunit 2
chr11	86147155	86148344	-	86147155	86148030	A5SS	0.33	50	50	ENSMUST00000018212.13	ENSMUSG00000018068.14	Ints2	chr11	protein_coding	integrator complex subunit 2
chr11	86147155	86147248	-	86147155	86148344	A5SS	0.33	50	50	ENSMUST00000139285.8	ENSMUSG00000018068.14	Ints2	chr11	protein_coding	integrator complex subunit 2
chr11	86147155	86148030	-	86147323	86148030	3pMXE	0.5	50	50	ENSMUST00000130614.2	ENSMUSG00000018068.14	Ints2	chr11	protein_coding	integrator complex subunit 2
chr11	86163389;86164549	86164481;86166200	-	86163389	86166200	cassetteExon	0.5	100	100	ENSMUST00000043624.9	ENSMUSG00000034297.15	Med13	chr11	protein_coding	mediator complex subunit 13
chr11	86377331	86379893	+	86377331;86377558	86377482;86379893	ES	0.5	50	50	ENSMUST00000020827.7	ENSMUSG00000020521.8	Rnft1	chr11	protein_coding	ring finger protein, transmembrane 1
chr11	86375625;86376043	86375777;86376887	+	86375625	86376887	cassetteExon	0.5	100	100	ENSMUST00000020827.7	ENSMUSG00000020521.8	Rnft1	chr11	protein_coding	ring finger protein, transmembrane 1
chr11	86395204;86397327	86397216;86397617	-	86395204	86397617	cassetteExon	0.5	100	100	ENSMUST00000154617.8	ENSMUSG00000020516.16	Rps6kb1	chr11	protein_coding	ribosomal protein S6 kinase, polypeptide 1
chr11	86407017;86407813	86407570;86408409	-	86407017	86408409	cassetteExon	0.5	100	100	ENSMUST00000154617.8	ENSMUSG00000020516.16	Rps6kb1	chr11	protein_coding	ribosomal protein S6 kinase, polypeptide 1
chr11	86407017;86408218	86407977;86408409	-	86407017	86408409	cassetteExon	0.5	100	100	ENSMUST00000154617.8	ENSMUSG00000020516.16	Rps6kb1	chr11	protein_coding	ribosomal protein S6 kinase, polypeptide 1
chr11	86426286;86434871	86434757;86435392	-	86426286	86435392	cassetteExon	0.5	100	100	ENSMUST00000154617.8	ENSMUSG00000020516.16	Rps6kb1	chr11	protein_coding	ribosomal protein S6 kinase, polypeptide 1
chr11	86407017;86408218	86407977;86408409	-	86407017;86407813	86407570;86408409	MXE	0.5	100	100	ENSMUST00000020824.15	ENSMUSG00000020516.16	Rps6kb1	chr11	protein_coding	ribosomal protein S6 kinase, polypeptide 1
chr11	86407813;86408218	86407977;86408409	-	86407813	86408409	cassetteExon	0.5	100	100	ENSMUST00000020824.15	ENSMUSG00000020516.16	Rps6kb1	chr11	protein_coding	ribosomal protein S6 kinase, polypeptide 1
chr11	86407017;86407813	86407570;86407977	-	86407017	86407977	cassetteExon	0.5	100	100	ENSMUST00000131194.2	ENSMUSG00000020516.16	Rps6kb1	chr11	protein_coding	ribosomal protein S6 kinase, polypeptide 1
chr11	86448715	86456511	+	86448715;86452202	86452062;86456511	ES	0.5	50	50	ENSMUST00000167178.9	ENSMUSG00000020513.16	Tubd1	chr11	protein_coding	tubulin, delta 1
chr11	86446130;86447613	86447521;86448551	+	86446130	86448551	cassetteExon	0.5	100	100	ENSMUST00000167178.9	ENSMUSG00000020513.16	Tubd1	chr11	protein_coding	tubulin, delta 1
chr11	86436056	86439609	+	86436162	86439609	A5SS	0.5	50	50	ENSMUST00000167178.9	ENSMUSG00000020513.16	Tubd1	chr11	protein_coding	tubulin, delta 1
chr11	86476277	86477498	-	86476277	86477322	A5SS&ES	0.5	50	50	ENSMUST00000018315.10	ENSMUSG00000018171.10	Vmp1	chr11	protein_coding	vacuole membrane protein 1
chr11	86492895	86493028	-	86492895	86498002	A5SS	0.5	50	50	ENSMUST00000018315.10	ENSMUSG00000018171.10	Vmp1	chr11	protein_coding	vacuole membrane protein 1
chr11	86556704	86561918	-	86556704	86574566	A5SS	0.5	50	50	ENSMUST00000018315.10	ENSMUSG00000018171.10	Vmp1	chr11	protein_coding	vacuole membrane protein 1
chr11	86574949;86578955	86578862;86580385	+	86574949	86580385	cassetteExon	0.5	100	100	ENSMUST00000108022.8	ENSMUSG00000072582.10	Ptrh2	chr11	protein_coding	peptidyl-tRNA hydrolase 2
chr11	86588166;86591907	86591887;86593035	-	86588166	86593035	cassetteExon	0.5	100	100	ENSMUST00000103186.11	ENSMUSG00000047126.18	Cltc	chr11	protein_coding	clathrin, heavy polypeptide (Hc)
chr11	86615153	86615897	-	86613153	86615897	A3SS	0.5	50	50	ENSMUST00000103186.11	ENSMUSG00000047126.18	Cltc	chr11	protein_coding	clathrin, heavy polypeptide (Hc)
chr11	86624670	86627885	-	86624670	86627897	A5SS	0.5	50	50	ENSMUST00000103186.11	ENSMUSG00000047126.18	Cltc	chr11	protein_coding	clathrin, heavy polypeptide (Hc)
chr11	86588166	86593035	-	86591907	86593035	3pMXE	0.5	50	50	ENSMUST00000134999.2	ENSMUSG00000047126.18	Cltc	chr11	protein_coding	clathrin, heavy polypeptide (Hc)
chr11	86676663	86680312	-	86676663;86680175	86679993;86680312	ES	0.5	50	50	ENSMUST00000018569.14	ENSMUSG00000018425.19	Dhx40	chr11	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 40
chr11	86684087	86689748	-	86684087;86688580	86688449;86689748	ES	0.5	50	50	ENSMUST00000018569.14	ENSMUSG00000018425.19	Dhx40	chr11	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 40
chr11	86689814	86690399	-	86689814	86690246	A5SS	0.5	50	50	ENSMUST00000018569.14	ENSMUSG00000018425.19	Dhx40	chr11	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 40
chr11	86697453	86697735	-	86697453	86698264	A5SS	0.5	50	50	ENSMUST00000018569.14	ENSMUSG00000018425.19	Dhx40	chr11	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 40
chr11	86676663	86680312	-	86676663	86679993	5pMXE	0.5	50	50	ENSMUST00000136977.2	ENSMUSG00000018425.19	Dhx40	chr11	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 40
chr11	86968976	86971651	-	86968976	86970992	A5SS	0.5	50	50	ENSMUST00000020801.14	ENSMUSG00000020495.14	Smg8	chr11	protein_coding	smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)
chr11	87000130	87006971	+	87000130	87006930	A3SS	0.5	50	50	ENSMUST00000020794.6	ENSMUSG00000020492.12	Ska2	chr11	protein_coding	spindle and kinetochore associated complex subunit 2
chr11	87014657	87017567	-	87014657	87017310	A5SS	0.5	50	50	ENSMUST00000129441.8	ENSMUSG00000085310.8	Gm11491	chr11	lncRNA	predicted gene 11491
chr11	87020643	87031311	+	87020643;87028456	87028416;87031311	ES	0.5	50	50	ENSMUST00000041282.13	ENSMUSG00000018548.16	Trim37	chr11	protein_coding	tripartite motif-containing 37
chr11	87092452	87097590	+	87092452;87096881	87096759;87097590	ES	0.5	50	50	ENSMUST00000041282.13	ENSMUSG00000018548.16	Trim37	chr11	protein_coding	tripartite motif-containing 37
chr11	87134248	87135095	-	87131617	87135095	A3SS	0.5	50	50	ENSMUST00000055438.5	ENSMUSG00000046442.5	Ppm1e	chr11	protein_coding	protein phosphatase 1E (PP2C domain containing)
chr11	87288583	87293424	-	87288583;87292382	87292216;87293424	ES	0.5	50	50	ENSMUST00000067692.13	ENSMUSG00000007646.14	Rad51c	chr11	protein_coding	RAD51 paralog C
chr11	87293682	87295421	-	87293682	87295130	5pMXE	0.5	50	50	ENSMUST00000067692.13	ENSMUSG00000007646.14	Rad51c	chr11	protein_coding	RAD51 paralog C
chr11	87271718;87279153	87279074;87279445	-	87271718	87279445	cassetteExon	0.5	100	100	ENSMUST00000067692.13	ENSMUSG00000007646.14	Rad51c	chr11	protein_coding	RAD51 paralog C
chr11	87318541	87324635	+	87295996	87324635	A5SS	0.5	50	50	ENSMUST00000060835.12	ENSMUSG00000010342.17	Tex14	chr11	protein_coding	testis expressed gene 14
chr11	87429488;87429896	87429822;87445754	+	87429488;87442466	87434110;87445754	MXE	0.5	100	100	ENSMUST00000131973.2	ENSMUSG00000010342.17	Tex14	chr11	protein_coding	testis expressed gene 14
chr11	87433393	87434110	+	87429488	87434110	A5SS	0.5	50	50	ENSMUST00000131973.2	ENSMUSG00000010342.17	Tex14	chr11	protein_coding	testis expressed gene 14
chr11	87429896	87433316	+	87429896	87445754	A3SS	0.5	50	50	ENSMUST00000100657.4	ENSMUSG00000010342.17	Tex14	chr11	protein_coding	testis expressed gene 14
chr11	87442466	87445754	+	87429896	87445754	A5SS	0.5	50	50	ENSMUST00000100657.4	ENSMUSG00000010342.17	Tex14	chr11	protein_coding	testis expressed gene 14
chr11	87459784	87474144	+	87459784;87461132	87461125;87474144	ES	0.16	50	50	ENSMUST00000239011.2	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87479678	87480001	+	87479678;87479911	87479794;87480001	ES	0.5	50	50	ENSMUST00000239011.2	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87480390	87480469	+	87480390	87480482	A3SS	0.5	50	50	ENSMUST00000239011.2	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87480644	87480835	+	87480644	87480782	A3SS	0.5	50	50	ENSMUST00000239011.2	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87469363	87474144	+	87461132	87474144	A5SS	0.16	50	50	ENSMUST00000239011.2	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87469363	87474747	+	87474440	87474747	A5SS&ES	0.25	50	50	ENSMUST00000239011.2	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87469854	87474144	+	87461132	87474144	A5SS	0.16	50	50	ENSMUST00000239011.2	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87469854	87474747	+	87474440	87474747	A5SS&ES	0.25	50	50	ENSMUST00000239011.2	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87472051	87474144	+	87461132	87474144	A5SS	0.16	50	50	ENSMUST00000239011.2	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87472051	87474747	+	87474440	87474747	A5SS&ES	0.25	50	50	ENSMUST00000239011.2	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87473101	87474144	+	87461132	87474144	A5SS	0.16	50	50	ENSMUST00000239011.2	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87475272	87475944	+	87475311	87475944	A5SS	0.5	50	50	ENSMUST00000239011.2	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87469363	87474144	+	87459784	87474144	A5SS	0.16	50	50	ENSMUST00000122945.9	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87469854	87474144	+	87459784	87474144	A5SS	0.16	50	50	ENSMUST00000122945.9	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87472051	87474144	+	87459784	87474144	A5SS	0.16	50	50	ENSMUST00000122945.9	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87473101	87474144	+	87459784	87474144	A5SS	0.16	50	50	ENSMUST00000122945.9	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87469363	87474747	+	87469363;87474440	87474144;87474747	ES	0.25	50	50	ENSMUST00000107962.8	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87469363;87469854	87469736;87474144	+	87469363	87474144	cassetteExon	0.5	100	100	ENSMUST00000107962.8	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87469363;87469854	87469736;87474747	+	87469363;87474440	87474144;87474747	MXE	0.5	100	100	ENSMUST00000107962.8	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87472051	87474144	+	87469363	87474144	A5SS	0.16	50	50	ENSMUST00000107962.8	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87473101	87474144	+	87469363	87474144	A5SS	0.16	50	50	ENSMUST00000107962.8	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87469363;87469854	87469736;87474747	+	87469363	87474747	cassetteExon	0.5	100	100	ENSMUST00000140398.8	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87472051	87474747	+	87469363	87474747	A5SS	0.25	50	50	ENSMUST00000140398.8	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87479678	87480001	+	87479911	87480001	A5SS	0.5	50	50	ENSMUST00000132723.8	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87469854	87474747	+	87469854;87474440	87474144;87474747	ES	0.25	50	50	ENSMUST00000135175.8	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87472051	87474144	+	87469854	87474144	A5SS	0.25	50	50	ENSMUST00000135175.8	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87473101	87474144	+	87469854	87474144	A5SS	0.25	50	50	ENSMUST00000135175.8	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87469363	87474747	+	87469854	87474747	5pMXE	0.25	50	50	ENSMUST00000107961.8	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87472051	87474747	+	87469854	87474747	A5SS	0.25	50	50	ENSMUST00000107961.8	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87472051	87474747	+	87472051;87474440	87474144;87474747	ES	0.5	50	50	ENSMUST00000018544.12	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87473101	87474144	+	87472051	87474144	A5SS	0.16	50	50	ENSMUST00000018544.12	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87472051	87474747	+	87472051	87474144	A3SS	0.5	50	50	ENSMUST00000134923.8	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87479678	87480001	+	87479678	87479794	3pMXE	0.5	50	50	ENSMUST00000133202.3	ENSMUSG00000020486.20	Septin4	chr11	protein_coding	septin 4
chr11	87495429	87495822	+	87495429;87495678	87495508;87495822	ES	0.5	50	50	ENSMUST00000103179.10	ENSMUSG00000018401.18	Mtmr4	chr11	protein_coding	myotubularin related protein 4
chr11	87483076;87483776	87483724;87484215	+	87483076	87484215	cassetteExon	0.5	100	100	ENSMUST00000103179.10	ENSMUSG00000018401.18	Mtmr4	chr11	protein_coding	myotubularin related protein 4
chr11	87483076;87483781	87483724;87484215	+	87483076	87484215	cassetteExon	0.5	100	100	ENSMUST00000103179.10	ENSMUSG00000018401.18	Mtmr4	chr11	protein_coding	myotubularin related protein 4
chr11	87483076;87483852	87483724;87484215	+	87483076	87484215	cassetteExon	0.5	100	100	ENSMUST00000103179.10	ENSMUSG00000018401.18	Mtmr4	chr11	protein_coding	myotubularin related protein 4
chr11	87486702	87488022	+	87484259	87488022	A5SS	0.5	50	50	ENSMUST00000103179.10	ENSMUSG00000018401.18	Mtmr4	chr11	protein_coding	myotubularin related protein 4
chr11	87483421	87483724	+	87483076	87483724	A5SS	0.5	50	50	ENSMUST00000146871.8	ENSMUSG00000018401.18	Mtmr4	chr11	protein_coding	myotubularin related protein 4
chr11	87483776	87484215	+	87483781	87484215	A5SS	0.25	50	50	ENSMUST00000146871.8	ENSMUSG00000018401.18	Mtmr4	chr11	protein_coding	myotubularin related protein 4
chr11	87483852	87484215	+	87483781	87484215	A5SS	0.25	50	50	ENSMUST00000146871.8	ENSMUSG00000018401.18	Mtmr4	chr11	protein_coding	myotubularin related protein 4
chr11	87483852	87484215	+	87483776	87484215	A5SS	0.33	50	50	ENSMUST00000123105.8	ENSMUSG00000018401.18	Mtmr4	chr11	protein_coding	myotubularin related protein 4
chr11	87483076	87484215	+	87483852	87484215	5pMXE	0.25	50	50	ENSMUST00000119628.8	ENSMUSG00000018401.18	Mtmr4	chr11	protein_coding	myotubularin related protein 4
chr11	87555693	87617976	+	87555693;87609326	87609204;87617976	ES	0.5	50	50	ENSMUST00000134684.8	ENSMUSG00000034177.16	Rnf43	chr11	protein_coding	ring finger protein 43
chr11	87590949	87609204	+	87555693	87609204	A5SS	0.5	50	50	ENSMUST00000134684.8	ENSMUSG00000034177.16	Rnf43	chr11	protein_coding	ring finger protein 43
chr11	87555693	87617976	+	87555693	87609204	3pMXE	0.5	50	50	ENSMUST00000123658.9	ENSMUSG00000034177.16	Rnf43	chr11	protein_coding	ring finger protein 43
chr11	87624796	87624982	+	87623211	87624982	A5SS	0.5	50	50	ENSMUST00000165679.8	ENSMUSG00000034177.16	Rnf43	chr11	protein_coding	ring finger protein 43
chr11	87593087	87595572	+	87592472	87595572	A5SS	0.5	50	50	ENSMUST00000137077.2	ENSMUSG00000085972.2	1110028F11Rik	chr11	lncRNA	RIKEN cDNA 1110028F11 gene
chr11	87629099;87631472	87631331;87633622	+	87629099	87633622	cassetteExon	0.5	100	100	ENSMUST00000093955.12	ENSMUSG00000020485.15	Supt4a	chr11	protein_coding	SPT4A, DSIF elongation factor subunit
chr11	87629099	87633534	+	87629099	87633622	A3SS	0.33	50	50	ENSMUST00000093955.12	ENSMUSG00000020485.15	Supt4a	chr11	protein_coding	SPT4A, DSIF elongation factor subunit
chr11	87629099	87633534	+	87629099	87631331	A3SS&ES	0.33	50	50	ENSMUST00000152700.8	ENSMUSG00000020485.15	Supt4a	chr11	protein_coding	SPT4A, DSIF elongation factor subunit
chr11	87653735	87655024	+	87653735;87654465	87654286;87655024	ES	0.5	50	50	ENSMUST00000039627.12	ENSMUSG00000034156.17	Tspoap1	chr11	protein_coding	TSPO associated protein 1
chr11	87668061	87670055	+	87668061;87669432	87668593;87670055	ES	0.5	50	50	ENSMUST00000039627.12	ENSMUSG00000034156.17	Tspoap1	chr11	protein_coding	TSPO associated protein 1
chr11	87672875	87675562	+	87672875;87673536	87673486;87675562	ES	0.5	50	50	ENSMUST00000039627.12	ENSMUSG00000034156.17	Tspoap1	chr11	protein_coding	TSPO associated protein 1
chr11	87670402	87670929	+	87670402	87671029	A3SS	0.5	50	50	ENSMUST00000039627.12	ENSMUSG00000034156.17	Tspoap1	chr11	protein_coding	TSPO associated protein 1
chr11	87655660	87656454	+	87655209	87656454	A5SS	0.5	50	50	ENSMUST00000039627.12	ENSMUSG00000034156.17	Tspoap1	chr11	protein_coding	TSPO associated protein 1
chr11	87672196	87672316	+	87672160	87672316	A5SS	0.5	50	50	ENSMUST00000039627.12	ENSMUSG00000034156.17	Tspoap1	chr11	protein_coding	TSPO associated protein 1
chr11	87668061	87668593	+	87668061	87670055	A3SS	0.5	50	50	ENSMUST00000144502.8	ENSMUSG00000034156.17	Tspoap1	chr11	protein_coding	TSPO associated protein 1
chr11	87669432	87670055	+	87668061	87670055	A5SS	0.5	50	50	ENSMUST00000144502.8	ENSMUSG00000034156.17	Tspoap1	chr11	protein_coding	TSPO associated protein 1
chr11	87672875	87675562	+	87672875	87673486	3pMXE	0.5	50	50	ENSMUST00000154758.2	ENSMUSG00000034156.17	Tspoap1	chr11	protein_coding	TSPO associated protein 1
chr11	87687262	87690690	+	87687262;87688468	87688150;87690690	ES	0.5	50	50	ENSMUST00000020779.11	ENSMUSG00000009350.14	Mpo	chr11	protein_coding	myeloperoxidase
chr11	87684901	87685340	+	87684901	87685363	A3SS	0.5	50	50	ENSMUST00000020779.11	ENSMUSG00000009350.14	Mpo	chr11	protein_coding	myeloperoxidase
chr11	87686747	87686899	+	87686747	87686843	A3SS	0.5	50	50	ENSMUST00000020779.11	ENSMUSG00000009350.14	Mpo	chr11	protein_coding	myeloperoxidase
chr11	87685188	87685363	+	87684901	87685363	A5SS	0.5	50	50	ENSMUST00000020779.11	ENSMUSG00000009350.14	Mpo	chr11	protein_coding	myeloperoxidase
chr11	87713102	87718985	-	87713102	87716568	5pMXE	0.5	50	50	ENSMUST00000103177.10	ENSMUSG00000009356.13	Lpo	chr11	protein_coding	lactoperoxidase
chr11	87762445	87762547	-	87762445	87763415	A5SS	0.5	50	50	ENSMUST00000049768.4	ENSMUSG00000052234.3	Epx	chr11	protein_coding	eosinophil peroxidase
chr11	87785138	87787878	-	87785138;87785586	87785494;87787878	ES	0.5	50	50	ENSMUST00000217095.2	ENSMUSG00000093920.3	Olfr463	chr11	protein_coding	olfactory receptor 463
chr11	87805748;87807507	87807388;87808495	-	87805748	87808495	cassetteExon	0.5	100	100	ENSMUST00000216461.2	ENSMUSG00000060787.10	Olfr464	chr11	protein_coding	olfactory receptor 464
chr11	87805569	87808495	-	87805748	87808495	A3SS	0.33	50	50	ENSMUST00000216461.2	ENSMUSG00000060787.10	Olfr464	chr11	protein_coding	olfactory receptor 464
chr11	87805569	87807388	-	87805748	87807388	A3SS	0.5	50	50	ENSMUST00000217112.2	ENSMUSG00000060787.10	Olfr464	chr11	protein_coding	olfactory receptor 464
chr11	87805569	87808495	-	87807507	87808495	A3SS&ES	0.33	50	50	ENSMUST00000217112.2	ENSMUSG00000060787.10	Olfr464	chr11	protein_coding	olfactory receptor 464
chr11	87805569	87808495	-	87805569;87807507	87807388;87808495	ES	0.33	50	50	ENSMUST00000215062.2	ENSMUSG00000060787.10	Olfr464	chr11	protein_coding	olfactory receptor 464
chr11	87805748	87808495	-	87807507	87808495	A3SS&ES	0.33	50	50	ENSMUST00000215062.2	ENSMUSG00000060787.10	Olfr464	chr11	protein_coding	olfactory receptor 464
chr11	87872061	87874698	-	87872396	87874698	A3SS	0.5	50	50	ENSMUST00000178105.3	ENSMUSG00000020483.15	Dynll2	chr11	protein_coding	dynein light chain LC8-type 2
chr11	87874836	87878069	-	87874836	87877154	5pMXE	0.5	50	50	ENSMUST00000107923.10	ENSMUSG00000020483.15	Dynll2	chr11	protein_coding	dynein light chain LC8-type 2
chr11	87940041	87940803	+	87940041	87940238	A3SS	0.5	50	50	ENSMUST00000139129.9	ENSMUSG00000018379.18	Srsf1	chr11	protein_coding	serine and arginine-rich splicing factor 1
chr11	87940041	87940803	+	87940041;87940424	87940238;87940803	ES	0.33	50	50	ENSMUST00000107920.10	ENSMUSG00000018379.18	Srsf1	chr11	protein_coding	serine and arginine-rich splicing factor 1
chr11	87939918	87940803	+	87940424	87940803	A5SS&ES	0.33	50	50	ENSMUST00000107920.10	ENSMUSG00000018379.18	Srsf1	chr11	protein_coding	serine and arginine-rich splicing factor 1
chr11	87939918	87940803	+	87940041	87940803	A5SS	0.33	50	50	ENSMUST00000134824.9	ENSMUSG00000018379.18	Srsf1	chr11	protein_coding	serine and arginine-rich splicing factor 1
chr11	87957329;87957664	87957521;87958070	+	87957329	87958070	cassetteExon	0.5	100	100	ENSMUST00000156149.8	ENSMUSG00000087373.8	Gm15892	chr11	lncRNA	predicted gene 15892
chr11	87957329	87958070	+	87957329	87957521	3pMXE	0.5	50	50	ENSMUST00000153213.2	ENSMUSG00000087373.8	Gm15892	chr11	lncRNA	predicted gene 15892
chr11	87965551	87966999	+	87965551	87967017	A3SS	0.5	50	50	ENSMUST00000018521.11	ENSMUSG00000018377.11	Vezf1	chr11	protein_coding	vascular endothelial zinc finger 1
chr11	88075543	88077867	+	88075543	88077887	A3SS	0.5	50	50	ENSMUST00000018522.13	ENSMUSG00000018378.14	Cuedc1	chr11	protein_coding	CUE domain containing 1
chr11	88053247	88060391	+	87990169	88060391	A5SS	0.5	50	50	ENSMUST00000018522.13	ENSMUSG00000018378.14	Cuedc1	chr11	protein_coding	CUE domain containing 1
chr11	88076946	88077887	+	88075543	88077887	A5SS	0.5	50	50	ENSMUST00000018522.13	ENSMUSG00000018378.14	Cuedc1	chr11	protein_coding	CUE domain containing 1
chr11	88095311	88100679	+	88095311;88096185	88096015;88100679	ES	0.5	50	50	ENSMUST00000024486.14	ENSMUSG00000023723.18	Mrps23	chr11	protein_coding	mitochondrial ribosomal protein S23
chr11	88100756	88101476	+	88100756;88101056	88100930;88101476	ES	0.5	50	50	ENSMUST00000024486.14	ENSMUSG00000023723.18	Mrps23	chr11	protein_coding	mitochondrial ribosomal protein S23
chr11	88095406	88096015	+	88095311	88096015	A5SS	0.33	50	50	ENSMUST00000024486.14	ENSMUSG00000023723.18	Mrps23	chr11	protein_coding	mitochondrial ribosomal protein S23
chr11	88095539	88096015	+	88095311	88096015	A5SS	0.33	50	50	ENSMUST00000024486.14	ENSMUSG00000023723.18	Mrps23	chr11	protein_coding	mitochondrial ribosomal protein S23
chr11	88095311	88100679	+	88096185	88100679	A5SS&ES	0.5	50	50	ENSMUST00000118784.8	ENSMUSG00000023723.18	Mrps23	chr11	protein_coding	mitochondrial ribosomal protein S23
chr11	88095539	88096015	+	88095406	88096015	A5SS	0.33	50	50	ENSMUST00000118784.8	ENSMUSG00000023723.18	Mrps23	chr11	protein_coding	mitochondrial ribosomal protein S23
chr11	88100756	88101476	+	88100756	88100930	3pMXE	0.5	50	50	ENSMUST00000139170.8	ENSMUSG00000023723.18	Mrps23	chr11	protein_coding	mitochondrial ribosomal protein S23
chr11	88608571	88609278	-	88608571	88608855	5pMXE	0.5	50	50	ENSMUST00000107909.8	ENSMUSG00000069769.14	Msi2	chr11	protein_coding	musashi RNA-binding protein 2
chr11	88239818	88257611	-	88239764	88257611	A3SS	0.5	50	50	ENSMUST00000107909.8	ENSMUSG00000069769.14	Msi2	chr11	protein_coding	musashi RNA-binding protein 2
chr11	88578774	88603264	-	88480973	88603264	A3SS	0.5	50	50	ENSMUST00000107909.8	ENSMUSG00000069769.14	Msi2	chr11	protein_coding	musashi RNA-binding protein 2
chr11	88609843	88611232	+	88609843	88610580	A3SS	0.5	50	50	ENSMUST00000138007.2	ENSMUSG00000087574.2	C030037D09Rik	chr11	lncRNA	RIKEN cDNA C030037D09 gene
chr11	88611398	88611519	+	88611398	88618367	A3SS	0.5	50	50	ENSMUST00000136201.2	ENSMUSG00000087574.2	C030037D09Rik	chr11	lncRNA	RIKEN cDNA C030037D09 gene
chr11	88736691	88754476	-	88736691	88742177	5pMXE	0.33	50	50	ENSMUST00000107903.8	ENSMUSG00000018428.16	Akap1	chr11	protein_coding	A kinase (PRKA) anchor protein 1
chr11	88736691	88755223	-	88736691	88742177	5pMXE	0.33	50	50	ENSMUST00000107903.8	ENSMUSG00000018428.16	Akap1	chr11	protein_coding	A kinase (PRKA) anchor protein 1
chr11	88732128;88734522	88734416;88735085	-	88732128	88735085	cassetteExon	0.5	100	100	ENSMUST00000107903.8	ENSMUSG00000018428.16	Akap1	chr11	protein_coding	A kinase (PRKA) anchor protein 1
chr11	88732128;88734650	88734416;88735085	-	88732128	88735085	cassetteExon	0.5	100	100	ENSMUST00000107903.8	ENSMUSG00000018428.16	Akap1	chr11	protein_coding	A kinase (PRKA) anchor protein 1
chr11	88732128	88732812	-	88732128	88735085	A5SS	0.33	50	50	ENSMUST00000107903.8	ENSMUSG00000018428.16	Akap1	chr11	protein_coding	A kinase (PRKA) anchor protein 1
chr11	88732128;88732864	88732812;88734416	-	88732128	88734416	cassetteExon	0.5	100	100	ENSMUST00000143720.8	ENSMUSG00000018428.16	Akap1	chr11	protein_coding	A kinase (PRKA) anchor protein 1
chr11	88734522;88734650	88734638;88735085	-	88734522	88735085	cassetteExon	0.5	100	100	ENSMUST00000143720.8	ENSMUSG00000018428.16	Akap1	chr11	protein_coding	A kinase (PRKA) anchor protein 1
chr11	88736691	88754476	-	88736691	88755223	A5SS	0.33	50	50	ENSMUST00000018572.11	ENSMUSG00000018428.16	Akap1	chr11	protein_coding	A kinase (PRKA) anchor protein 1
chr11	88904364	88906359	+	88904364;88906016	88905993;88906359	ES	0.5	50	50	ENSMUST00000107896.10	ENSMUSG00000000275.17	Trim25	chr11	protein_coding	tripartite motif-containing 25
chr11	88931737	88932322	-	88931737	88932274	A5SS	0.5	50	50	ENSMUST00000107894.8	ENSMUSG00000000276.12	Dgke	chr11	protein_coding	diacylglycerol kinase, epsilon
chr11	88935137	88939675	-	88935137	88939715	A5SS	0.5	50	50	ENSMUST00000107894.8	ENSMUSG00000000276.12	Dgke	chr11	protein_coding	diacylglycerol kinase, epsilon
chr11	88957128	88957272	+	88957045	88957272	A5SS	0.5	50	50	ENSMUST00000178493.8	ENSMUSG00000063109.14	Dgkeos	chr11	lncRNA	diacylglycerol kinase, epsilon, opposite strand
chr11	88979517	88983506	+	88979517	88983712	A3SS	0.5	50	50	ENSMUST00000100619.11	ENSMUSG00000072553.11	Gm525	chr11	protein_coding	predicted gene 525
chr11	89302982	89311935	-	89302982	89309673	5pMXE	0.5	50	50	ENSMUST00000208932.2	ENSMUSG00000047773.16	Ankfn1	chr11	protein_coding	ankyrin-repeat and fibronectin type III domain containing 1
chr11	89530443	89587568	-	89530443	89668441	A5SS	0.33	50	50	ENSMUST00000238273.3	ENSMUSG00000047773.16	Ankfn1	chr11	protein_coding	ankyrin-repeat and fibronectin type III domain containing 1
chr11	89530443	89587651	-	89530443	89668441	A5SS	0.33	50	50	ENSMUST00000238273.3	ENSMUSG00000047773.16	Ankfn1	chr11	protein_coding	ankyrin-repeat and fibronectin type III domain containing 1
chr11	89530443	89587568	-	89530443	89587651	A5SS	0.33	50	50	ENSMUST00000128717.9	ENSMUSG00000047773.16	Ankfn1	chr11	protein_coding	ankyrin-repeat and fibronectin type III domain containing 1
chr11	90079061;90098886	90098782;90099810	+	90079061	90099810	cassetteExon	0.5	100	100	ENSMUST00000124877.3	ENSMUSG00000110344.2	Gm45716	chr11	protein_coding	predicted gene 45716
chr11	90079061	90139631	+	90079061	90099810	A3SS&ES	0.33	50	50	ENSMUST00000124877.3	ENSMUSG00000110344.2	Gm45716	chr11	protein_coding	predicted gene 45716
chr11	90099872	90124917	+	90099872	90118861	A3SS&ES	0.33	50	50	ENSMUST00000124877.3	ENSMUSG00000110344.2	Gm45716	chr11	protein_coding	predicted gene 45716
chr11	90099872	90139631	+	90099872	90118861	A3SS&ES	0.33	50	50	ENSMUST00000124877.3	ENSMUSG00000110344.2	Gm45716	chr11	protein_coding	predicted gene 45716
chr11	90140561	90141597	+	90119015	90141597	A5SS	0.5	50	50	ENSMUST00000124877.3	ENSMUSG00000110344.2	Gm45716	chr11	protein_coding	predicted gene 45716
chr11	90079061;90099872	90099810;90139631	+	90079061	90139631	cassetteExon	0.5	100	100	ENSMUST00000153734.2	ENSMUSG00000110344.2	Gm45716	chr11	protein_coding	predicted gene 45716
chr11	90079061	90098782	+	90079061	90139631	A3SS	0.33	50	50	ENSMUST00000153734.2	ENSMUSG00000110344.2	Gm45716	chr11	protein_coding	predicted gene 45716
chr11	90140561	90148346	+	90140561	90141597	3pMXE	0.5	50	50	ENSMUST00000134929.8	ENSMUSG00000110344.2	Gm45716	chr11	protein_coding	predicted gene 45716
chr11	90099872;90119015	90118861;90141597	+	90099872;90140561	90139631;90141597	MXE	0.5	100	100	ENSMUST00000134929.8	ENSMUSG00000110344.2	Gm45716	chr11	protein_coding	predicted gene 45716
chr11	90099872	90124917	+	90099872	90139631	A3SS	0.33	50	50	ENSMUST00000134929.8	ENSMUSG00000110344.2	Gm45716	chr11	protein_coding	predicted gene 45716
chr11	90099872	90148346	+	90099872;90125088	90124917;90148346	ES	0.33	50	50	ENSMUST00000210131.2	ENSMUSG00000109967.2	Gm45883	chr11	lncRNA	predicted gene 45883
chr11	90140561	90148346	+	90125088	90148346	A5SS	0.33	50	50	ENSMUST00000210131.2	ENSMUSG00000109967.2	Gm45883	chr11	lncRNA	predicted gene 45883
chr11	90099872	90118861	+	90099872	90148346	A3SS	0.25	50	50	ENSMUST00000211334.2	ENSMUSG00000109967.2	Gm45883	chr11	lncRNA	predicted gene 45883
chr11	90099872	90139631	+	90099872	90148346	A3SS	0.25	50	50	ENSMUST00000211334.2	ENSMUSG00000109967.2	Gm45883	chr11	lncRNA	predicted gene 45883
chr11	90140561	90148346	+	90099872	90148346	A5SS	0.33	50	50	ENSMUST00000211334.2	ENSMUSG00000109967.2	Gm45883	chr11	lncRNA	predicted gene 45883
chr11	90236804;90261191	90261117;90278612	-	90236804	90278612	cassetteExon	0.5	100	100	ENSMUST00000004051.8	ENSMUSG00000003949.17	Hlf	chr11	protein_coding	hepatic leukemia factor
chr11	90236804	90272235	-	90236804	90278612	A5SS	0.33	50	50	ENSMUST00000004051.8	ENSMUSG00000003949.17	Hlf	chr11	protein_coding	hepatic leukemia factor
chr11	90278947	90280371	-	90278947	90281076	A5SS	0.33	50	50	ENSMUST00000004051.8	ENSMUSG00000003949.17	Hlf	chr11	protein_coding	hepatic leukemia factor
chr11	90278947	90280422	-	90278947	90281076	A5SS	0.33	50	50	ENSMUST00000004051.8	ENSMUSG00000003949.17	Hlf	chr11	protein_coding	hepatic leukemia factor
chr11	90236804	90272235	-	90236804	90261117	A5SS&ES	0.33	50	50	ENSMUST00000043658.12	ENSMUSG00000003949.17	Hlf	chr11	protein_coding	hepatic leukemia factor
chr11	90278947	90280371	-	90278947	90280422	A5SS	0.33	50	50	ENSMUST00000043658.12	ENSMUSG00000003949.17	Hlf	chr11	protein_coding	hepatic leukemia factor
chr11	90513087;90521743	90521278;90528859	-	90513087	90528859	cassetteExon	0.5	100	100	ENSMUST00000143203.8	ENSMUSG00000020546.15	Stxbp4	chr11	protein_coding	syntaxin binding protein 4
chr11	90495700	90496779	-	90491106	90496779	A3SS	0.5	50	50	ENSMUST00000143203.8	ENSMUSG00000020546.15	Stxbp4	chr11	protein_coding	syntaxin binding protein 4
chr11	90513087	90528859	-	90513087	90521278	5pMXE	0.5	50	50	ENSMUST00000132905.2	ENSMUSG00000020546.15	Stxbp4	chr11	protein_coding	syntaxin binding protein 4
chr11	90513087	90528859	-	90521743	90528859	3pMXE	0.5	50	50	ENSMUST00000132078.2	ENSMUSG00000020546.15	Stxbp4	chr11	protein_coding	syntaxin binding protein 4
chr11	90562026	90564490	-	90562026;90563763	90563659;90564490	ES	0.5	50	50	ENSMUST00000020849.9	ENSMUSG00000020541.13	Tom1l1	chr11	protein_coding	target of myb1-like 1 (chicken)
chr11	90575972	90578553	-	90575972	90578339	5pMXE	0.5	50	50	ENSMUST00000020849.9	ENSMUSG00000020541.13	Tom1l1	chr11	protein_coding	target of myb1-like 1 (chicken)
chr11	90574156	90575888	-	90574139	90575888	A3SS	0.5	50	50	ENSMUST00000020849.9	ENSMUSG00000020541.13	Tom1l1	chr11	protein_coding	target of myb1-like 1 (chicken)
chr11	90562026;90564612	90564490;90565496	-	90562026	90565496	cassetteExon	0.5	100	100	ENSMUST00000107869.9	ENSMUSG00000020541.13	Tom1l1	chr11	protein_coding	target of myb1-like 1 (chicken)
chr11	90562026	90563659	-	90562026	90565496	A5SS	0.33	50	50	ENSMUST00000107869.9	ENSMUSG00000020541.13	Tom1l1	chr11	protein_coding	target of myb1-like 1 (chicken)
chr11	90774316	90785522	+	90714006	90785522	A5SS	0.33	50	50	ENSMUST00000142521.2	ENSMUSG00000085940.2	4930405D11Rik	chr11	lncRNA	RIKEN cDNA 4930405D11 gene
chr11	90778566	90785522	+	90714006	90785522	A5SS	0.33	50	50	ENSMUST00000142521.2	ENSMUSG00000085940.2	4930405D11Rik	chr11	lncRNA	RIKEN cDNA 4930405D11 gene
chr11	90774316;90778566	90778449;90785522	+	90774316	90785522	cassetteExon	0.5	100	100	ENSMUST00000142163.2	ENSMUSG00000085940.2	4930405D11Rik	chr11	lncRNA	RIKEN cDNA 4930405D11 gene
chr11	92989548	92990472	+	92988935	92990472	A5SS	0.5	50	50	ENSMUST00000149611.2	ENSMUSG00000056158.15	Car10	chr11	protein_coding	carbonic anhydrase 10
chr11	93195473	93381318	+	93195473	93259266	3pMXE	0.5	50	50	ENSMUST00000107859.8	ENSMUSG00000056158.15	Car10	chr11	protein_coding	carbonic anhydrase 10
chr11	92989548	92990469	+	92989548	92990472	A3SS	0.5	50	50	ENSMUST00000107859.8	ENSMUSG00000056158.15	Car10	chr11	protein_coding	carbonic anhydrase 10
chr11	93817152	93822639	+	93817152;93820587	93820440;93822639	ES	0.5	50	50	ENSMUST00000107853.8	ENSMUSG00000059474.14	Mbtd1	chr11	protein_coding	mbt domain containing 1
chr11	93803284;93809773	93809657;93812193	+	93803284	93812193	cassetteExon	0.5	100	100	ENSMUST00000107853.8	ENSMUSG00000059474.14	Mbtd1	chr11	protein_coding	mbt domain containing 1
chr11	93824784	93834488	+	93824784	93834601	A3SS	0.5	50	50	ENSMUST00000107853.8	ENSMUSG00000059474.14	Mbtd1	chr11	protein_coding	mbt domain containing 1
chr11	93776947	93795985	+	93776888	93795985	A5SS	0.2	50	50	ENSMUST00000107853.8	ENSMUSG00000059474.14	Mbtd1	chr11	protein_coding	mbt domain containing 1
chr11	93777242	93795985	+	93776888	93795985	A5SS	0.2	50	50	ENSMUST00000107853.8	ENSMUSG00000059474.14	Mbtd1	chr11	protein_coding	mbt domain containing 1
chr11	93777899	93795985	+	93776888	93795985	A5SS	0.2	50	50	ENSMUST00000107853.8	ENSMUSG00000059474.14	Mbtd1	chr11	protein_coding	mbt domain containing 1
chr11	93782214	93795985	+	93776888	93795985	A5SS	0.2	50	50	ENSMUST00000107853.8	ENSMUSG00000059474.14	Mbtd1	chr11	protein_coding	mbt domain containing 1
chr11	93776947;93777899	93777848;93795985	+	93776947	93795985	cassetteExon	0.5	100	100	ENSMUST00000107850.8	ENSMUSG00000059474.14	Mbtd1	chr11	protein_coding	mbt domain containing 1
chr11	93777242	93795985	+	93776947	93795985	A5SS	0.2	50	50	ENSMUST00000107850.8	ENSMUSG00000059474.14	Mbtd1	chr11	protein_coding	mbt domain containing 1
chr11	93782214	93795985	+	93776947	93795985	A5SS	0.2	50	50	ENSMUST00000107850.8	ENSMUSG00000059474.14	Mbtd1	chr11	protein_coding	mbt domain containing 1
chr11	93777899	93795985	+	93777899;93782214	93782165;93795985	ES	0.25	50	50	ENSMUST00000140880.8	ENSMUSG00000059474.14	Mbtd1	chr11	protein_coding	mbt domain containing 1
chr11	93777242	93777848	+	93776947	93777848	A5SS	0.5	50	50	ENSMUST00000140880.8	ENSMUSG00000059474.14	Mbtd1	chr11	protein_coding	mbt domain containing 1
chr11	93777242	93782165	+	93777899	93782165	A5SS&ES	0.5	50	50	ENSMUST00000140880.8	ENSMUSG00000059474.14	Mbtd1	chr11	protein_coding	mbt domain containing 1
chr11	93777242	93795985	+	93782214	93795985	A5SS&ES	0.25	50	50	ENSMUST00000140880.8	ENSMUSG00000059474.14	Mbtd1	chr11	protein_coding	mbt domain containing 1
chr11	93777242	93795985	+	93777242;93782214	93782165;93795985	ES	0.33	50	50	ENSMUST00000127539.8	ENSMUSG00000059474.14	Mbtd1	chr11	protein_coding	mbt domain containing 1
chr11	93777242;93777899	93777848;93782165	+	93777242	93782165	cassetteExon	0.5	100	100	ENSMUST00000127539.8	ENSMUSG00000059474.14	Mbtd1	chr11	protein_coding	mbt domain containing 1
chr11	93777242;93777899	93777848;93795985	+	93777242;93782214	93782165;93795985	MXE	0.5	100	100	ENSMUST00000127539.8	ENSMUSG00000059474.14	Mbtd1	chr11	protein_coding	mbt domain containing 1
chr11	93777242	93795985	+	93777242;93777899	93777848;93795985	ES	0.33	50	50	ENSMUST00000145354.8	ENSMUSG00000059474.14	Mbtd1	chr11	protein_coding	mbt domain containing 1
chr11	93776947	93795985	+	93777899	93795985	5pMXE	0.2	50	50	ENSMUST00000063645.11	ENSMUSG00000059474.14	Mbtd1	chr11	protein_coding	mbt domain containing 1
chr11	93777242	93795985	+	93777899	93795985	5pMXE	0.2	50	50	ENSMUST00000063645.11	ENSMUSG00000059474.14	Mbtd1	chr11	protein_coding	mbt domain containing 1
chr11	93817152	93822639	+	93817152	93820440	3pMXE	0.5	50	50	ENSMUST00000063645.11	ENSMUSG00000059474.14	Mbtd1	chr11	protein_coding	mbt domain containing 1
chr11	93846450	93851494	-	93846450	93846652	5pMXE	0.5	50	50	ENSMUST00000021217.11	ENSMUSG00000020857.12	Nme2	chr11	protein_coding	NME/NM23 nucleoside diphosphate kinase 2
chr11	93850339	93851494	-	93846450	93851494	A3SS	0.5	50	50	ENSMUST00000170303.2	ENSMUSG00000091228.2	Gm20390	chr11	protein_coding	predicted gene 20390
chr11	93851661	93854053	-	93851606	93854053	A3SS	0.5	50	50	ENSMUST00000170303.2	ENSMUSG00000091228.2	Gm20390	chr11	protein_coding	predicted gene 20390
chr11	93887399;93904569	93904449;93927426	+	93887399	93927426	cassetteExon	0.5	100	100	ENSMUST00000132772.8	ENSMUSG00000020859.17	Spag9	chr11	protein_coding	sperm associated antigen 9
chr11	93935351	93939234	+	93934492	93939234	A5SS	0.5	50	50	ENSMUST00000132605.2	ENSMUSG00000020859.17	Spag9	chr11	protein_coding	sperm associated antigen 9
chr11	93939384;93951125	93951084;93958719	+	93939384	93958719	cassetteExon	0.5	100	100	ENSMUST00000041956.14	ENSMUSG00000020859.17	Spag9	chr11	protein_coding	sperm associated antigen 9
chr11	93962512;93970036	93970025;93972166	+	93962512	93972166	cassetteExon	0.5	100	100	ENSMUST00000041956.14	ENSMUSG00000020859.17	Spag9	chr11	protein_coding	sperm associated antigen 9
chr11	93962512;93971580	93971566;93972166	+	93962512	93972166	cassetteExon	0.5	100	100	ENSMUST00000041956.14	ENSMUSG00000020859.17	Spag9	chr11	protein_coding	sperm associated antigen 9
chr11	94002972;94004127	94004089;94004999	+	94002972	94004999	cassetteExon	0.5	100	100	ENSMUST00000041956.14	ENSMUSG00000020859.17	Spag9	chr11	protein_coding	sperm associated antigen 9
chr11	93962512	93962649	+	93962512	93972166	A3SS	0.25	50	50	ENSMUST00000041956.14	ENSMUSG00000020859.17	Spag9	chr11	protein_coding	sperm associated antigen 9
chr11	93983253	93983638	+	93983253	93983641	A3SS	0.5	50	50	ENSMUST00000041956.14	ENSMUSG00000020859.17	Spag9	chr11	protein_coding	sperm associated antigen 9
chr11	93939384	93958719	+	93939384	93951084	3pMXE	0.5	50	50	ENSMUST00000127066.2	ENSMUSG00000020859.17	Spag9	chr11	protein_coding	sperm associated antigen 9
chr11	93962512;93971580	93971566;93972166	+	93962512;93970036	93970025;93972166	MXE	0.5	100	100	ENSMUST00000075695.13	ENSMUSG00000020859.17	Spag9	chr11	protein_coding	sperm associated antigen 9
chr11	93962512	93962649	+	93962512	93970025	A3SS	0.25	50	50	ENSMUST00000075695.13	ENSMUSG00000020859.17	Spag9	chr11	protein_coding	sperm associated antigen 9
chr11	93962512	93962649	+	93962512	93971566	A3SS	0.25	50	50	ENSMUST00000092777.11	ENSMUSG00000020859.17	Spag9	chr11	protein_coding	sperm associated antigen 9
chr11	94026650	94029313	+	94024381	94029313	A5SS	0.5	50	50	ENSMUST00000132584.8	ENSMUSG00000086003.8	B230206L02Rik	chr11	lncRNA	RIKEN cDNA B230206L02 gene
chr11	94029489	94040662	+	94029489	94046282	A3SS	0.5	50	50	ENSMUST00000155965.2	ENSMUSG00000086003.8	B230206L02Rik	chr11	lncRNA	RIKEN cDNA B230206L02 gene
chr11	94042238	94046282	+	94029489	94046282	A5SS	0.5	50	50	ENSMUST00000155965.2	ENSMUSG00000086003.8	B230206L02Rik	chr11	lncRNA	RIKEN cDNA B230206L02 gene
chr11	94197051	94212516	-	94197051;94200517	94200451;94212516	ES	0.5	50	50	ENSMUST00000166312.8	ENSMUSG00000020863.16	Luc7l3	chr11	protein_coding	LUC7-like 3 (S. cerevisiae)
chr11	94182404;94183298	94183220;94183753	-	94182404	94183753	cassetteExon	0.5	100	100	ENSMUST00000166312.8	ENSMUSG00000020863.16	Luc7l3	chr11	protein_coding	LUC7-like 3 (S. cerevisiae)
chr11	94182404;94183298	94183233;94183753	-	94182404	94183753	cassetteExon	0.5	100	100	ENSMUST00000166312.8	ENSMUSG00000020863.16	Luc7l3	chr11	protein_coding	LUC7-like 3 (S. cerevisiae)
chr11	94183881	94183964	-	94183858	94183964	A3SS	0.5	50	50	ENSMUST00000166312.8	ENSMUSG00000020863.16	Luc7l3	chr11	protein_coding	LUC7-like 3 (S. cerevisiae)
chr11	94182404	94183911	-	94182404	94183753	A5SS&ES	0.25	50	50	ENSMUST00000166312.8	ENSMUSG00000020863.16	Luc7l3	chr11	protein_coding	LUC7-like 3 (S. cerevisiae)
chr11	94188746	94189776	-	94188746	94190782	A5SS	0.5	50	50	ENSMUST00000166312.8	ENSMUSG00000020863.16	Luc7l3	chr11	protein_coding	LUC7-like 3 (S. cerevisiae)
chr11	94182404	94183220	-	94182404	94183233	A5SS	0.25	50	50	ENSMUST00000132623.9	ENSMUSG00000020863.16	Luc7l3	chr11	protein_coding	LUC7-like 3 (S. cerevisiae)
chr11	94182404	94183911	-	94182404	94183233	A5SS&ES	0.25	50	50	ENSMUST00000132623.9	ENSMUSG00000020863.16	Luc7l3	chr11	protein_coding	LUC7-like 3 (S. cerevisiae)
chr11	94182404	94183220	-	94182404	94183911	A5SS	0.25	50	50	ENSMUST00000107821.9	ENSMUSG00000020863.16	Luc7l3	chr11	protein_coding	LUC7-like 3 (S. cerevisiae)
chr11	94229347	94230066	+	94229347	94230379	A3SS	0.33	50	50	ENSMUST00000107818.9	ENSMUSG00000020864.14	Ankrd40	chr11	protein_coding	ankyrin repeat domain 40
chr11	94229347	94230459	+	94229347	94230379	A3SS	0.33	50	50	ENSMUST00000107818.9	ENSMUSG00000020864.14	Ankrd40	chr11	protein_coding	ankyrin repeat domain 40
chr11	94229347	94230066	+	94229347	94230459	A3SS	0.33	50	50	ENSMUST00000051221.13	ENSMUSG00000020864.14	Ankrd40	chr11	protein_coding	ankyrin repeat domain 40
chr11	94250766	94251998	-	94250769	94251998	A3SS	0.5	50	50	ENSMUST00000178136.8	ENSMUSG00000020865.17	Abcc3	chr11	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 3
chr11	94309796	94316611	-	94309796;94314550	94314497;94316611	ES	0.5	50	50	ENSMUST00000107786.8	ENSMUSG00000020866.18	Cacna1g	chr11	protein_coding	calcium channel, voltage-dependent, T type, alpha 1G subunit
chr11	94329015;94330603	94330535;94333556	-	94329015	94333556	cassetteExon	0.5	100	100	ENSMUST00000107786.8	ENSMUSG00000020866.18	Cacna1g	chr11	protein_coding	calcium channel, voltage-dependent, T type, alpha 1G subunit
chr11	94305900	94306569	-	94302442	94306569	A3SS	0.5	50	50	ENSMUST00000107786.8	ENSMUSG00000020866.18	Cacna1g	chr11	protein_coding	calcium channel, voltage-dependent, T type, alpha 1G subunit
chr11	94307481	94307667	-	94307530	94307667	A3SS	0.5	50	50	ENSMUST00000107786.8	ENSMUSG00000020866.18	Cacna1g	chr11	protein_coding	calcium channel, voltage-dependent, T type, alpha 1G subunit
chr11	94350703	94352719	-	94350652	94352719	A3SS	0.5	50	50	ENSMUST00000107786.8	ENSMUSG00000020866.18	Cacna1g	chr11	protein_coding	calcium channel, voltage-dependent, T type, alpha 1G subunit
chr11	94302442	94303916	-	94302442	94306569	A5SS	0.5	50	50	ENSMUST00000107786.8	ENSMUSG00000020866.18	Cacna1g	chr11	protein_coding	calcium channel, voltage-dependent, T type, alpha 1G subunit
chr11	94309796	94316590	-	94309796	94314497	A5SS&ES	0.33	50	50	ENSMUST00000107786.8	ENSMUSG00000020866.18	Cacna1g	chr11	protein_coding	calcium channel, voltage-dependent, T type, alpha 1G subunit
chr11	94314550	94316590	-	94314550	94316611	A5SS	0.5	50	50	ENSMUST00000107786.8	ENSMUSG00000020866.18	Cacna1g	chr11	protein_coding	calcium channel, voltage-dependent, T type, alpha 1G subunit
chr11	94309796;94314550	94314497;94316590	-	94309796	94316590	cassetteExon	0.5	100	100	ENSMUST00000107791.8	ENSMUSG00000020866.18	Cacna1g	chr11	protein_coding	calcium channel, voltage-dependent, T type, alpha 1G subunit
chr11	94309796	94316611	-	94309796	94316590	A5SS	0.33	50	50	ENSMUST00000107791.8	ENSMUSG00000020866.18	Cacna1g	chr11	protein_coding	calcium channel, voltage-dependent, T type, alpha 1G subunit
chr11	94309796	94316611	-	94309796	94314497	A5SS&ES	0.33	50	50	ENSMUST00000100561.10	ENSMUSG00000020866.18	Cacna1g	chr11	protein_coding	calcium channel, voltage-dependent, T type, alpha 1G subunit
chr11	94374539	94375094	-	94374539;94374976	94374775;94375094	ES	0.5	50	50	ENSMUST00000134332.8	ENSMUSG00000020867.14	Spata20	chr11	protein_coding	spermatogenesis associated 20
chr11	94374539	94374895	-	94374539	94374775	A5SS	0.33	50	50	ENSMUST00000134332.8	ENSMUSG00000020867.14	Spata20	chr11	protein_coding	spermatogenesis associated 20
chr11	94375925	94376887	-	94375925	94376036	5pMXE	0.5	50	50	ENSMUST00000041705.8	ENSMUSG00000020867.14	Spata20	chr11	protein_coding	spermatogenesis associated 20
chr11	94374539	94375094	-	94374539;94374976	94374895;94375094	ES	0.5	50	50	ENSMUST00000151707.8	ENSMUSG00000020867.14	Spata20	chr11	protein_coding	spermatogenesis associated 20
chr11	94383261	94384599	-	94383261;94383775	94383688;94384599	ES	0.5	50	50	ENSMUST00000127305.2	ENSMUSG00000010080.16	Epn3	chr11	protein_coding	epsin 3
chr11	94384730	94385760	-	94384730;94384999	94384919;94385760	ES	0.5	50	50	ENSMUST00000127305.2	ENSMUSG00000010080.16	Epn3	chr11	protein_coding	epsin 3
chr11	94382845	94382992	-	94382851	94382992	A3SS	0.5	50	50	ENSMUST00000127305.2	ENSMUSG00000010080.16	Epn3	chr11	protein_coding	epsin 3
chr11	94385837	94386828	-	94385878	94386828	A3SS	0.5	50	50	ENSMUST00000127305.2	ENSMUSG00000010080.16	Epn3	chr11	protein_coding	epsin 3
chr11	94387507	94388968	-	94387507	94390519	A5SS	0.33	50	50	ENSMUST00000127305.2	ENSMUSG00000010080.16	Epn3	chr11	protein_coding	epsin 3
chr11	94387507	94389873	-	94387507	94390519	A5SS	0.33	50	50	ENSMUST00000127305.2	ENSMUSG00000010080.16	Epn3	chr11	protein_coding	epsin 3
chr11	94387507	94389873	-	94387507	94388968	5pMXE	0.33	50	50	ENSMUST00000142992.2	ENSMUSG00000010080.16	Epn3	chr11	protein_coding	epsin 3
chr11	94394122	94394297	-	94394122	94394347	A5SS	0.5	50	50	ENSMUST00000139432.2	ENSMUSG00000039110.16	Mycbpap	chr11	protein_coding	MYCBP associated protein
chr11	94397348	94398373	-	94397348	94397936	5pMXE	0.5	50	50	ENSMUST00000040692.9	ENSMUSG00000039110.16	Mycbpap	chr11	protein_coding	MYCBP associated protein
chr11	94394125	94394297	-	94394122	94394297	A3SS	0.5	50	50	ENSMUST00000040692.9	ENSMUSG00000039110.16	Mycbpap	chr11	protein_coding	MYCBP associated protein
chr11	94405481	94412226	-	94405481	94412001	A5SS	0.5	50	50	ENSMUST00000239238.2	ENSMUSG00000039110.16	Mycbpap	chr11	protein_coding	MYCBP associated protein
chr11	94435611	94439004	-	94435611	94438985	A5SS	0.5	50	50	ENSMUST00000040487.4	ENSMUSG00000039096.11	Rsad1	chr11	protein_coding	radical S-adenosyl methionine domain containing 1
chr11	94439430	94439805	-	94439430	94439809	A5SS	0.5	50	50	ENSMUST00000040487.4	ENSMUSG00000039096.11	Rsad1	chr11	protein_coding	radical S-adenosyl methionine domain containing 1
chr11	94460858	94461440	-	94460858;94461286	94461129;94461440	ES	0.5	50	50	ENSMUST00000103164.4	ENSMUSG00000076435.4	Acsf2	chr11	protein_coding	acyl-CoA synthetase family member 2
chr11	94463105	94463859	-	94463105;94463476	94463348;94463859	ES	0.5	50	50	ENSMUST00000103164.4	ENSMUSG00000076435.4	Acsf2	chr11	protein_coding	acyl-CoA synthetase family member 2
chr11	94453744	94454544	-	94453744	94460136	A5SS	0.5	50	50	ENSMUST00000103164.4	ENSMUSG00000076435.4	Acsf2	chr11	protein_coding	acyl-CoA synthetase family member 2
chr11	94460858	94461440	-	94461286	94461440	3pMXE	0.5	50	50	ENSMUST00000155122.2	ENSMUSG00000076435.4	Acsf2	chr11	protein_coding	acyl-CoA synthetase family member 2
chr11	94541849	94544377	-	94541849	94544522	A5SS	0.5	50	50	ENSMUST00000039949.5	ENSMUSG00000039055.5	Eme1	chr11	protein_coding	essential meiotic structure-specific endonuclease 1
chr11	94544667	94547234	+	94544667	94547313	A3SS	0.5	50	50	ENSMUST00000025278.8	ENSMUSG00000024414.14	Mrpl27	chr11	protein_coding	mitochondrial ribosomal protein L27
chr11	94544986	94547313	+	94544667	94547313	A5SS	0.5	50	50	ENSMUST00000025278.8	ENSMUSG00000024414.14	Mrpl27	chr11	protein_coding	mitochondrial ribosomal protein L27
chr11	94544986	94547234	+	94544667	94547234	A5SS	0.5	50	50	ENSMUST00000132813.8	ENSMUSG00000024414.14	Mrpl27	chr11	protein_coding	mitochondrial ribosomal protein L27
chr11	94544986	94547313	+	94544986	94547234	A3SS	0.5	50	50	ENSMUST00000129498.8	ENSMUSG00000024414.14	Mrpl27	chr11	protein_coding	mitochondrial ribosomal protein L27
chr11	94557357	94558410	-	94557357;94558120	94557925;94558410	ES	0.5	50	50	ENSMUST00000116349.9	ENSMUSG00000020868.16	Xylt2	chr11	protein_coding	xylosyltransferase II
chr11	94560908	94568099	-	94560908;94561626	94561134;94568099	ES	0.33	50	50	ENSMUST00000116349.9	ENSMUSG00000020868.16	Xylt2	chr11	protein_coding	xylosyltransferase II
chr11	94567097	94568099	-	94561626	94568099	A3SS	0.33	50	50	ENSMUST00000116349.9	ENSMUSG00000020868.16	Xylt2	chr11	protein_coding	xylosyltransferase II
chr11	94557357	94558887	-	94557357;94558672	94558410;94558887	ES	0.5	50	50	ENSMUST00000153485.3	ENSMUSG00000020868.16	Xylt2	chr11	protein_coding	xylosyltransferase II
chr11	94557357	94557925	-	94557357	94558887	A5SS	0.33	50	50	ENSMUST00000150377.2	ENSMUSG00000020868.16	Xylt2	chr11	protein_coding	xylosyltransferase II
chr11	94557357	94558410	-	94558120	94558410	3pMXE	0.5	50	50	ENSMUST00000154830.2	ENSMUSG00000020868.16	Xylt2	chr11	protein_coding	xylosyltransferase II
chr11	94567097	94568099	-	94560908	94568099	A3SS	0.33	50	50	ENSMUST00000146693.3	ENSMUSG00000020868.16	Xylt2	chr11	protein_coding	xylosyltransferase II
chr11	94669574;94669885	94669743;94670082	-	94669574;94669941	94669887;94670082	MXE	0.5	100	100	ENSMUST00000100554.8	ENSMUSG00000075610.10	Tmem92	chr11	protein_coding	transmembrane protein 92
chr11	94669885	94670082	-	94669941	94670082	A3SS	0.5	50	50	ENSMUST00000162809.3	ENSMUSG00000075610.10	Tmem92	chr11	protein_coding	transmembrane protein 92
chr11	94669574	94669887	-	94669574	94669743	A5SS	0.5	50	50	ENSMUST00000162809.3	ENSMUSG00000075610.10	Tmem92	chr11	protein_coding	transmembrane protein 92
chr11	94828654	94828736	+	94827270	94828736	A5SS	0.5	50	50	ENSMUST00000001547.8	ENSMUSG00000001506.11	Col1a1	chr11	protein_coding	collagen, type I, alpha 1
chr11	94853792	94854028	-	94853906	94854028	A3SS	0.5	50	50	ENSMUST00000103162.8	ENSMUSG00000001508.16	Sgca	chr11	protein_coding	sarcoglycan, alpha (dystrophin-associated glycoprotein)
chr11	94888940;94890476	94890373;94891033	+	94888940	94891033	cassetteExon	0.5	100	100	ENSMUST00000038696.12	ENSMUSG00000038976.13	Ppp1r9b	chr11	protein_coding	protein phosphatase 1, regulatory subunit 9B
chr11	94905232	94910756	+	94905232;94910353	94910187;94910756	ES	0.5	50	50	ENSMUST00000055947.10	ENSMUSG00000047181.13	Samd14	chr11	protein_coding	sterile alpha motif domain containing 14
chr11	94901463	94905178	+	94901402	94905178	A5SS	0.5	50	50	ENSMUST00000055947.10	ENSMUSG00000047181.13	Samd14	chr11	protein_coding	sterile alpha motif domain containing 14
chr11	94918148	94919305	-	94918148;94918804	94918691;94919305	ES	0.5	50	50	ENSMUST00000038431.8	ENSMUSG00000038967.14	Pdk2	chr11	protein_coding	pyruvate dehydrogenase kinase, isoenzyme 2
chr11	94930316	94931211	-	94930316	94931965	A5SS	0.33	50	50	ENSMUST00000038431.8	ENSMUSG00000038967.14	Pdk2	chr11	protein_coding	pyruvate dehydrogenase kinase, isoenzyme 2
chr11	94930316	94931362	-	94930316	94931965	A5SS	0.33	50	50	ENSMUST00000038431.8	ENSMUSG00000038967.14	Pdk2	chr11	protein_coding	pyruvate dehydrogenase kinase, isoenzyme 2
chr11	94930316	94931362	-	94930316	94931211	A5SS	0.33	50	50	ENSMUST00000141712.8	ENSMUSG00000038967.14	Pdk2	chr11	protein_coding	pyruvate dehydrogenase kinase, isoenzyme 2
chr11	94936589	94937747	-	94936589;94937416	94937275;94937747	ES	0.5	50	50	ENSMUST00000107739.8	ENSMUSG00000001507.17	Itga3	chr11	protein_coding	integrin alpha 3
chr11	94959665	94967594	-	94959665	94966957	5pMXE	0.5	50	50	ENSMUST00000001548.14	ENSMUSG00000001507.17	Itga3	chr11	protein_coding	integrin alpha 3
chr11	94959665	94967594	-	94959665;94967484	94966957;94967594	ES	0.5	50	50	ENSMUST00000120375.8	ENSMUSG00000001507.17	Itga3	chr11	protein_coding	integrin alpha 3
chr11	94967484	94967594	-	94959665	94967594	A3SS	0.5	50	50	ENSMUST00000145671.2	ENSMUSG00000001507.17	Itga3	chr11	protein_coding	integrin alpha 3
chr11	95035439	95036022	-	95032805	95036022	A3SS	0.5	50	50	ENSMUST00000021241.8	ENSMUSG00000020871.9	Dlx4	chr11	protein_coding	distal-less homeobox 4
chr11	95166713	95168295	-	95166713;95167375	95167269;95168295	ES	0.5	50	50	ENSMUST00000092766.12	ENSMUSG00000038909.17	Kat7	chr11	protein_coding	K(lysine) acetyltransferase 7
chr11	95180696	95185389	-	95180696;95182435	95182346;95185389	ES	0.5	50	50	ENSMUST00000092766.12	ENSMUSG00000038909.17	Kat7	chr11	protein_coding	K(lysine) acetyltransferase 7
chr11	95191044	95196875	-	95191044;95194135	95193959;95196875	ES	0.5	50	50	ENSMUST00000092766.12	ENSMUSG00000038909.17	Kat7	chr11	protein_coding	K(lysine) acetyltransferase 7
chr11	95197022	95200861	-	95197022	95200363	5pMXE	0.33	50	50	ENSMUST00000092766.12	ENSMUSG00000038909.17	Kat7	chr11	protein_coding	K(lysine) acetyltransferase 7
chr11	95180696	95181716	-	95180696	95182346	A5SS	0.33	50	50	ENSMUST00000092766.12	ENSMUSG00000038909.17	Kat7	chr11	protein_coding	K(lysine) acetyltransferase 7
chr11	95197022	95200204	-	95197022	95200363	A5SS	0.33	50	50	ENSMUST00000092766.12	ENSMUSG00000038909.17	Kat7	chr11	protein_coding	K(lysine) acetyltransferase 7
chr11	95180696	95181716	-	95180696	95185389	A5SS	0.33	50	50	ENSMUST00000072621.12	ENSMUSG00000038909.17	Kat7	chr11	protein_coding	K(lysine) acetyltransferase 7
chr11	95191044;95194135	95193959;95200861	-	95191044;95197022	95196875;95200861	MXE	0.5	100	100	ENSMUST00000103159.10	ENSMUSG00000038909.17	Kat7	chr11	protein_coding	K(lysine) acetyltransferase 7
chr11	95197022	95200204	-	95197022	95200861	A5SS	0.33	50	50	ENSMUST00000103159.10	ENSMUSG00000038909.17	Kat7	chr11	protein_coding	K(lysine) acetyltransferase 7
chr11	95194135	95200861	-	95194135;95197022	95196875;95200861	ES	0.5	50	50	ENSMUST00000107734.10	ENSMUSG00000038909.17	Kat7	chr11	protein_coding	K(lysine) acetyltransferase 7
chr11	95194135	95200861	-	95197022	95200861	A3SS&ES	0.5	50	50	ENSMUST00000144456.8	ENSMUSG00000038909.17	Kat7	chr11	protein_coding	K(lysine) acetyltransferase 7
chr11	95180696	95185389	-	95180696	95182346	A5SS&ES	0.33	50	50	ENSMUST00000144456.8	ENSMUSG00000038909.17	Kat7	chr11	protein_coding	K(lysine) acetyltransferase 7
chr11	95191044	95196875	-	95194135	95196875	3pMXE	0.5	50	50	ENSMUST00000154327.2	ENSMUSG00000038909.17	Kat7	chr11	protein_coding	K(lysine) acetyltransferase 7
chr11	95197022	95200204	-	95196970	95200204	A3SS	0.5	50	50	ENSMUST00000154327.2	ENSMUSG00000038909.17	Kat7	chr11	protein_coding	K(lysine) acetyltransferase 7
chr11	95230899	95254825	+	95228087	95254825	A5SS	0.25	50	50	ENSMUST00000037502.7	ENSMUSG00000038893.13	Fam117a	chr11	protein_coding	family with sequence similarity 117, member A
chr11	95241997	95254825	+	95228087	95254825	A5SS	0.25	50	50	ENSMUST00000037502.7	ENSMUSG00000038893.13	Fam117a	chr11	protein_coding	family with sequence similarity 117, member A
chr11	95246680	95254825	+	95228087	95254825	A5SS	0.25	50	50	ENSMUST00000037502.7	ENSMUSG00000038893.13	Fam117a	chr11	protein_coding	family with sequence similarity 117, member A
chr11	95230899;95246680	95246492;95254825	+	95230899	95254825	cassetteExon	0.5	100	100	ENSMUST00000129553.8	ENSMUSG00000038893.13	Fam117a	chr11	protein_coding	family with sequence similarity 117, member A
chr11	95230899	95240636	+	95230899	95254825	A3SS	0.33	50	50	ENSMUST00000129553.8	ENSMUSG00000038893.13	Fam117a	chr11	protein_coding	family with sequence similarity 117, member A
chr11	95241997	95254825	+	95230899	95254825	A5SS	0.25	50	50	ENSMUST00000129553.8	ENSMUSG00000038893.13	Fam117a	chr11	protein_coding	family with sequence similarity 117, member A
chr11	95230899	95240636	+	95230899	95246492	A3SS	0.33	50	50	ENSMUST00000129290.2	ENSMUSG00000038893.13	Fam117a	chr11	protein_coding	family with sequence similarity 117, member A
chr11	95241997	95254825	+	95246680	95254825	A5SS&ES	0.33	50	50	ENSMUST00000129290.2	ENSMUSG00000038893.13	Fam117a	chr11	protein_coding	family with sequence similarity 117, member A
chr11	95230899;95246680	95246492;95254825	+	95230899;95241997	95240636;95254825	MXE	0.5	100	100	ENSMUST00000143482.2	ENSMUSG00000038893.13	Fam117a	chr11	protein_coding	family with sequence similarity 117, member A
chr11	95276730	95277337	+	95276730	95277312	A3SS	0.5	50	50	ENSMUST00000021243.16	ENSMUSG00000020873.16	Slc35b1	chr11	protein_coding	solute carrier family 35, member B1
chr11	95275826	95276627	+	95275939	95276627	A5SS	0.5	50	50	ENSMUST00000021243.16	ENSMUSG00000020873.16	Slc35b1	chr11	protein_coding	solute carrier family 35, member B1
chr11	95376173;95376362	95376285;95376663	+	95376173	95376663	cassetteExon	0.5	100	100	ENSMUST00000107724.9	ENSMUSG00000057522.16	Spop	chr11	protein_coding	speckle-type BTB/POZ protein
chr11	95362170	95365132	+	95362170	95365057	A3SS	0.5	50	50	ENSMUST00000107724.9	ENSMUSG00000057522.16	Spop	chr11	protein_coding	speckle-type BTB/POZ protein
chr11	95304967	95305158	+	95304957	95305158	A5SS	0.5	50	50	ENSMUST00000107724.9	ENSMUSG00000057522.16	Spop	chr11	protein_coding	speckle-type BTB/POZ protein
chr11	95557965	95558863	+	95557868	95558863	A5SS	0.5	50	50	ENSMUST00000125172.8	ENSMUSG00000038845.12	Phb	chr11	protein_coding	prohibitin
chr11	95644881	95719492	+	95644881	95654365	3pMXE	0.5	50	50	ENSMUST00000107717.8	ENSMUSG00000075595.10	Zfp652	chr11	protein_coding	zinc finger protein 652
chr11	95604054	95639826	+	95603559	95639826	A5SS	0.5	50	50	ENSMUST00000107717.8	ENSMUSG00000075595.10	Zfp652	chr11	protein_coding	zinc finger protein 652
chr11	95640433	95643701	+	95640973	95643701	A5SS	0.5	50	50	ENSMUST00000107717.8	ENSMUSG00000075595.10	Zfp652	chr11	protein_coding	zinc finger protein 652
chr11	95719601	95721377	+	95719601	95721259	A3SS	0.5	50	50	ENSMUST00000133070.8	ENSMUSG00000075595.10	Zfp652	chr11	protein_coding	zinc finger protein 652
chr11	95715535	95719492	+	95644881	95719492	A5SS	0.5	50	50	ENSMUST00000133070.8	ENSMUSG00000075595.10	Zfp652	chr11	protein_coding	zinc finger protein 652
chr11	95724157	95724466	-	95724160	95724466	A3SS	0.5	50	50	ENSMUST00000059026.10	ENSMUSG00000018381.16	Abi3	chr11	protein_coding	ABI family member 3
chr11	95728143	95732847	-	95728063	95732847	A3SS	0.5	50	50	ENSMUST00000059026.10	ENSMUSG00000018381.16	Abi3	chr11	protein_coding	ABI family member 3
chr11	95728063	95733235	-	95728063	95732847	A5SS	0.5	50	50	ENSMUST00000059026.10	ENSMUSG00000018381.16	Abi3	chr11	protein_coding	ABI family member 3
chr11	95734721	95735877	+	95728197	95735877	A5SS	0.5	50	50	ENSMUST00000107712.8	ENSMUSG00000038811.14	Gngt2	chr11	protein_coding	guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2
chr11	95734721	95735858	+	95734721	95735877	A3SS	0.5	50	50	ENSMUST00000107714.9	ENSMUSG00000038811.14	Gngt2	chr11	protein_coding	guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2
chr11	95733621	95734638	+	95733252	95734638	A5SS	0.33	50	50	ENSMUST00000107714.9	ENSMUSG00000038811.14	Gngt2	chr11	protein_coding	guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2
chr11	95734218	95734638	+	95733252	95734638	A5SS	0.33	50	50	ENSMUST00000107714.9	ENSMUSG00000038811.14	Gngt2	chr11	protein_coding	guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2
chr11	95734218	95734638	+	95733621	95734638	A5SS	0.33	50	50	ENSMUST00000100532.10	ENSMUSG00000038811.14	Gngt2	chr11	protein_coding	guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2
chr11	95870495	95871875	-	95870495	95895049	A5SS	0.33	50	50	ENSMUST00000013559.3	ENSMUSG00000013415.10	Igf2bp1	chr11	protein_coding	insulin-like growth factor 2 mRNA binding protein 1
chr11	95870495	95873328	-	95870495	95895049	A5SS	0.33	50	50	ENSMUST00000013559.3	ENSMUSG00000013415.10	Igf2bp1	chr11	protein_coding	insulin-like growth factor 2 mRNA binding protein 1
chr11	95870495;95871956	95871875;95873328	-	95870495	95873328	cassetteExon	0.5	100	100	ENSMUST00000152896.8	ENSMUSG00000013415.10	Igf2bp1	chr11	protein_coding	insulin-like growth factor 2 mRNA binding protein 1
chr11	95915906	95916180	+	95915450	95916180	A5SS	0.5	50	50	ENSMUST00000103157.10	ENSMUSG00000014351.13	Gip	chr11	protein_coding	gastric inhibitory polypeptide
chr11	95936128	95938021	+	95936128;95937180	95937106;95938021	ES	0.5	50	50	ENSMUST00000006217.10	ENSMUSG00000006058.11	Snf8	chr11	protein_coding	SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)
chr11	95930243	95930528	+	95930243	95932451	A3SS	0.5	50	50	ENSMUST00000006217.10	ENSMUSG00000006058.11	Snf8	chr11	protein_coding	SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)
chr11	95936128	95938021	+	95936128	95937106	A3SS	0.5	50	50	ENSMUST00000145749.2	ENSMUSG00000006058.11	Snf8	chr11	protein_coding	SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)
chr11	95965859	95966253	-	95965859	95966453	A5SS	0.33	50	50	ENSMUST00000090541.12	ENSMUSG00000006057.16	Atp5g1	chr11	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9)
chr11	95965859	95966383	-	95965859	95966453	A5SS	0.33	50	50	ENSMUST00000090541.12	ENSMUSG00000006057.16	Atp5g1	chr11	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9)
chr11	95965859	95966383	-	95965859	95966253	A5SS	0.33	50	50	ENSMUST00000107686.8	ENSMUSG00000006057.16	Atp5g1	chr11	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9)
chr11	96049784	96055770	+	96049784	96055574	A3SS	0.5	50	50	ENSMUST00000167258.8	ENSMUSG00000038756.14	Ttll6	chr11	protein_coding	tubulin tyrosine ligase-like family, member 6
chr11	96143394	96152438	+	96142639	96152438	A5SS	0.5	50	50	ENSMUST00000129907.3	ENSMUSG00000078706.5	Gm53	chr11	lncRNA	predicted gene 53
chr11	96152835	96155000	+	96152589	96155000	A5SS	0.5	50	50	ENSMUST00000129907.3	ENSMUSG00000078706.5	Gm53	chr11	lncRNA	predicted gene 53
chr11	96162645	96165450	+	96162884	96165450	A5SS	0.5	50	50	ENSMUST00000000010.9	ENSMUSG00000020875.10	Hoxb9	chr11	protein_coding	homeobox B9
chr11	96174212	96174992	+	96174212	96174989	A3SS	0.5	50	50	ENSMUST00000052650.4	ENSMUSG00000056648.6	Hoxb8	chr11	protein_coding	homeobox B8
chr11	96179793	96180203	+	96177953	96180203	A5SS	0.5	50	50	ENSMUST00000049352.8	ENSMUSG00000038721.9	Hoxb7	chr11	protein_coding	homeobox B7
chr11	96184380	96195808	-	96184380	96197563	A5SS	0.5	50	50	ENSMUST00000150698.2	ENSMUSG00000085645.2	Hoxb5os	chr11	lncRNA	homeobox B5 and homeobox B6, opposite strand
chr11	96231977	96232268	+	96231977	96234926	A3SS	0.5	50	50	ENSMUST00000093944.10	ENSMUSG00000048763.12	Hoxb3	chr11	protein_coding	homeobox B3
chr11	96219259	96231890	+	96214271	96231890	A5SS	0.33	50	50	ENSMUST00000093944.10	ENSMUSG00000048763.12	Hoxb3	chr11	protein_coding	homeobox B3
chr11	96231795	96231890	+	96214271	96231890	A5SS	0.33	50	50	ENSMUST00000093944.10	ENSMUSG00000048763.12	Hoxb3	chr11	protein_coding	homeobox B3
chr11	96231795	96231890	+	96219259	96231890	A5SS	0.33	50	50	ENSMUST00000123091.8	ENSMUSG00000048763.12	Hoxb3	chr11	protein_coding	homeobox B3
chr11	96237524	96237653	-	96234051	96237653	A3SS	0.5	50	50	ENSMUST00000147410.4	ENSMUSG00000084844.4	Hoxb3os	chr11	lncRNA	homeobox B3 and homeobox B2, opposite strand
chr11	96257453	96257637	+	96257217	96257637	A5SS	0.5	50	50	ENSMUST00000019117.3	ENSMUSG00000018973.3	Hoxb1	chr11	protein_coding	homeobox B1
chr11	96604028	96621951	+	96604028;96614223	96614176;96621951	ES	0.5	50	50	ENSMUST00000103154.11	ENSMUSG00000057058.17	Skap1	chr11	protein_coding	src family associated phosphoprotein 1
chr11	96622051	96649448	+	96622051;96644965	96644857;96649448	ES	0.5	50	50	ENSMUST00000103154.11	ENSMUSG00000057058.17	Skap1	chr11	protein_coding	src family associated phosphoprotein 1
chr11	96380754	96382674	+	96380754	96416869	A3SS	0.33	50	50	ENSMUST00000103154.11	ENSMUSG00000057058.17	Skap1	chr11	protein_coding	src family associated phosphoprotein 1
chr11	96380754	96383702	+	96380754	96416869	A3SS	0.33	50	50	ENSMUST00000103154.11	ENSMUSG00000057058.17	Skap1	chr11	protein_coding	src family associated phosphoprotein 1
chr11	96432312	96472009	+	96432312	96593435	A3SS	0.25	50	50	ENSMUST00000103154.11	ENSMUSG00000057058.17	Skap1	chr11	protein_coding	src family associated phosphoprotein 1
chr11	96432312	96568760	+	96432312	96593435	A3SS	0.25	50	50	ENSMUST00000103154.11	ENSMUSG00000057058.17	Skap1	chr11	protein_coding	src family associated phosphoprotein 1
chr11	96374725	96380649	+	96355576	96380649	A5SS	0.5	50	50	ENSMUST00000103154.11	ENSMUSG00000057058.17	Skap1	chr11	protein_coding	src family associated phosphoprotein 1
chr11	96380754	96382674	+	96380754	96383702	A3SS	0.33	50	50	ENSMUST00000100519.11	ENSMUSG00000057058.17	Skap1	chr11	protein_coding	src family associated phosphoprotein 1
chr11	96432312	96472009	+	96432312	96599392	A3SS	0.25	50	50	ENSMUST00000136836.8	ENSMUSG00000057058.17	Skap1	chr11	protein_coding	src family associated phosphoprotein 1
chr11	96432312	96568760	+	96432312	96599392	A3SS	0.25	50	50	ENSMUST00000136836.8	ENSMUSG00000057058.17	Skap1	chr11	protein_coding	src family associated phosphoprotein 1
chr11	96432312	96593435	+	96432312	96599392	A3SS	0.25	50	50	ENSMUST00000136836.8	ENSMUSG00000057058.17	Skap1	chr11	protein_coding	src family associated phosphoprotein 1
chr11	96594972	96599392	+	96432312	96599392	A5SS	0.5	50	50	ENSMUST00000136836.8	ENSMUSG00000057058.17	Skap1	chr11	protein_coding	src family associated phosphoprotein 1
chr11	96432312	96568760	+	96432312	96472009	3pMXE	0.25	50	50	ENSMUST00000107662.9	ENSMUSG00000057058.17	Skap1	chr11	protein_coding	src family associated phosphoprotein 1
chr11	96665321	96667794	-	96665321;96666259	96666200;96667794	ES	0.5	50	50	ENSMUST00000021246.9	ENSMUSG00000020876.15	Snx11	chr11	protein_coding	sorting nexin 11
chr11	96660769	96661465	-	96660148	96661465	A3SS	0.5	50	50	ENSMUST00000021246.9	ENSMUSG00000020876.15	Snx11	chr11	protein_coding	sorting nexin 11
chr11	96693648	96697442	+	96693824	96697442	A5SS	0.5	50	50	ENSMUST00000134585.8	ENSMUSG00000018666.14	Cbx1	chr11	protein_coding	chromobox 1
chr11	96693648	96699010	+	96693648;96697590	96697442;96699010	ES	0.5	50	50	ENSMUST00000093943.10	ENSMUSG00000018666.14	Cbx1	chr11	protein_coding	chromobox 1
chr11	96713145	96714902	-	96713145	96714771	5pMXE	0.2	50	50	ENSMUST00000167110.8	ENSMUSG00000038615.18	Nfe2l1	chr11	protein_coding	nuclear factor, erythroid derived 2,-like 1
chr11	96713145	96715122	-	96713145	96714771	5pMXE	0.2	50	50	ENSMUST00000167110.8	ENSMUSG00000038615.18	Nfe2l1	chr11	protein_coding	nuclear factor, erythroid derived 2,-like 1
chr11	96713145	96718024	-	96713145	96714771	5pMXE	0.2	50	50	ENSMUST00000167110.8	ENSMUSG00000038615.18	Nfe2l1	chr11	protein_coding	nuclear factor, erythroid derived 2,-like 1
chr11	96713145	96713235	-	96713145	96714771	A5SS	0.2	50	50	ENSMUST00000167110.8	ENSMUSG00000038615.18	Nfe2l1	chr11	protein_coding	nuclear factor, erythroid derived 2,-like 1
chr11	96713145	96715122	-	96713145	96714902	5pMXE	0.2	50	50	ENSMUST00000169828.8	ENSMUSG00000038615.18	Nfe2l1	chr11	protein_coding	nuclear factor, erythroid derived 2,-like 1
chr11	96713145	96718024	-	96713145	96714902	5pMXE	0.2	50	50	ENSMUST00000169828.8	ENSMUSG00000038615.18	Nfe2l1	chr11	protein_coding	nuclear factor, erythroid derived 2,-like 1
chr11	96713145	96713235	-	96713145	96714902	A5SS	0.2	50	50	ENSMUST00000169828.8	ENSMUSG00000038615.18	Nfe2l1	chr11	protein_coding	nuclear factor, erythroid derived 2,-like 1
chr11	96719049	96720645	-	96719049	96720237	5pMXE	0.33	50	50	ENSMUST00000167149.8	ENSMUSG00000038615.18	Nfe2l1	chr11	protein_coding	nuclear factor, erythroid derived 2,-like 1
chr11	96719049	96720649	-	96719049	96720237	5pMXE	0.33	50	50	ENSMUST00000167149.8	ENSMUSG00000038615.18	Nfe2l1	chr11	protein_coding	nuclear factor, erythroid derived 2,-like 1
chr11	96713145	96713235	-	96713145	96718024	A5SS	0.2	50	50	ENSMUST00000167149.8	ENSMUSG00000038615.18	Nfe2l1	chr11	protein_coding	nuclear factor, erythroid derived 2,-like 1
chr11	96713145	96715122	-	96713145	96718024	A5SS	0.2	50	50	ENSMUST00000167149.8	ENSMUSG00000038615.18	Nfe2l1	chr11	protein_coding	nuclear factor, erythroid derived 2,-like 1
chr11	96719049	96720649	-	96719049	96720645	A5SS	0.33	50	50	ENSMUST00000081775.12	ENSMUSG00000038615.18	Nfe2l1	chr11	protein_coding	nuclear factor, erythroid derived 2,-like 1
chr11	96713145	96715122	-	96713145	96713235	5pMXE	0.2	50	50	ENSMUST00000134951.2	ENSMUSG00000038615.18	Nfe2l1	chr11	protein_coding	nuclear factor, erythroid derived 2,-like 1
chr11	96741567;96742980	96742937;96744261	+	96741567	96744261	cassetteExon	0.5	100	100	ENSMUST00000018816.14	ENSMUSG00000018672.16	Copz2	chr11	protein_coding	coatomer protein complex, subunit zeta 2
chr11	96745465	96746086	+	96745465	96746082	A3SS	0.5	50	50	ENSMUST00000018816.14	ENSMUSG00000018672.16	Copz2	chr11	protein_coding	coatomer protein complex, subunit zeta 2
chr11	96754931	96764679	-	96754772	96764679	A3SS	0.33	50	50	ENSMUST00000143569.2	ENSMUSG00000087117.9	Gm11523	chr11	lncRNA	predicted gene 11523
chr11	96763247	96764679	-	96754772	96764679	A3SS	0.33	50	50	ENSMUST00000143569.2	ENSMUSG00000087117.9	Gm11523	chr11	lncRNA	predicted gene 11523
chr11	96754931	96764679	-	96754931;96763247	96763103;96764679	ES	0.33	50	50	ENSMUST00000184482.8	ENSMUSG00000087117.9	Gm11523	chr11	lncRNA	predicted gene 11523
chr11	96803221	96804208	-	96803221;96803880	96803832;96804208	ES	0.5	50	50	ENSMUST00000103152.11	ENSMUSG00000018669.15	Cdk5rap3	chr11	protein_coding	CDK5 regulatory subunit associated protein 3
chr11	96803262	96803832	-	96803221	96803832	A3SS	0.5	50	50	ENSMUST00000103152.11	ENSMUSG00000018669.15	Cdk5rap3	chr11	protein_coding	CDK5 regulatory subunit associated protein 3
chr11	96804703	96806977	-	96804622	96806977	A3SS	0.5	50	50	ENSMUST00000103152.11	ENSMUSG00000018669.15	Cdk5rap3	chr11	protein_coding	CDK5 regulatory subunit associated protein 3
chr11	96804622	96806877	-	96804622	96806977	A5SS	0.5	50	50	ENSMUST00000103152.11	ENSMUSG00000018669.15	Cdk5rap3	chr11	protein_coding	CDK5 regulatory subunit associated protein 3
chr11	96803221	96804208	-	96803880	96804208	A3SS&ES	0.5	50	50	ENSMUST00000153305.8	ENSMUSG00000018669.15	Cdk5rap3	chr11	protein_coding	CDK5 regulatory subunit associated protein 3
chr11	96835040	96835671	+	96832608	96835671	A5SS	0.33	50	50	ENSMUST00000131501.8	ENSMUSG00000078700.11	D030028A08Rik	chr11	lncRNA	RIKEN cDNA D030028A08 gene
chr11	96835176	96835671	+	96832608	96835671	A5SS	0.33	50	50	ENSMUST00000131501.8	ENSMUSG00000078700.11	D030028A08Rik	chr11	lncRNA	RIKEN cDNA D030028A08 gene
chr11	96843554	96849679	+	96843554	96850380	A3SS	0.5	50	50	ENSMUST00000135825.9	ENSMUSG00000078700.11	D030028A08Rik	chr11	lncRNA	RIKEN cDNA D030028A08 gene
chr11	96835176	96835671	+	96835040	96835671	A5SS	0.33	50	50	ENSMUST00000135825.9	ENSMUSG00000078700.11	D030028A08Rik	chr11	lncRNA	RIKEN cDNA D030028A08 gene
chr11	96850277	96850380	+	96843554	96850380	A5SS	0.5	50	50	ENSMUST00000135825.9	ENSMUSG00000078700.11	D030028A08Rik	chr11	lncRNA	RIKEN cDNA D030028A08 gene
chr11	96850441	96851687	+	96851107	96851687	A5SS	0.5	50	50	ENSMUST00000135825.9	ENSMUSG00000078700.11	D030028A08Rik	chr11	lncRNA	RIKEN cDNA D030028A08 gene
chr11	96820335;96822379	96822337;96825341	+	96820335	96825341	cassetteExon	0.5	100	100	ENSMUST00000054311.6	ENSMUSG00000047040.10	Prr15l	chr11	protein_coding	proline rich 15-like
chr11	96820335	96825344	+	96820335	96825341	A3SS	0.33	50	50	ENSMUST00000054311.6	ENSMUSG00000047040.10	Prr15l	chr11	protein_coding	proline rich 15-like
chr11	96820335	96825344	+	96820335	96822337	A3SS&ES	0.33	50	50	ENSMUST00000107636.4	ENSMUSG00000047040.10	Prr15l	chr11	protein_coding	proline rich 15-like
chr11	96822379	96825344	+	96822379	96825341	A3SS	0.5	50	50	ENSMUST00000107636.4	ENSMUSG00000047040.10	Prr15l	chr11	protein_coding	proline rich 15-like
chr11	96820335;96822379	96822337;96825344	+	96820335	96825344	cassetteExon	0.5	100	100	ENSMUST00000062172.6	ENSMUSG00000047040.10	Prr15l	chr11	protein_coding	proline rich 15-like
chr11	96820335	96825344	+	96822379	96825344	5pMXE	0.5	50	50	ENSMUST00000107633.2	ENSMUSG00000047040.10	Prr15l	chr11	protein_coding	proline rich 15-like
chr11	96830895	96833236	-	96831781	96833236	A3SS	0.5	50	50	ENSMUST00000153896.2	ENSMUSG00000018659.13	Pnpo	chr11	protein_coding	pyridoxine 5'-phosphate oxidase
chr11	96830895	96833236	-	96830895;96831781	96831682;96833236	ES	0.5	50	50	ENSMUST00000018803.12	ENSMUSG00000018659.13	Pnpo	chr11	protein_coding	pyridoxine 5'-phosphate oxidase
chr11	96854270	96872238	-	96854270	96868447	5pMXE	0.5	50	50	ENSMUST00000107624.8	ENSMUSG00000018678.14	Sp2	chr11	protein_coding	Sp2 transcription factor
chr11	96909853	96912232	+	96904436	96912232	A5SS	0.5	50	50	ENSMUST00000047997.8	ENSMUSG00000038560.8	Sp6	chr11	protein_coding	trans-acting transcription factor 6
chr11	96943202	96943353	+	96943202	96943312	A3SS	0.5	50	50	ENSMUST00000090020.13	ENSMUSG00000038534.20	Osbpl7	chr11	protein_coding	oxysterol binding protein-like 7
chr11	97030416;97033683	97033562;97037126	-	97030416	97037126	cassetteExon	0.5	100	100	ENSMUST00000066078.12	ENSMUSG00000038517.16	Tbkbp1	chr11	protein_coding	TBK1 binding protein 1
chr11	97038379;97038557	97038517;97039455	-	97038379	97039455	cassetteExon	0.5	100	100	ENSMUST00000066078.12	ENSMUSG00000038517.16	Tbkbp1	chr11	protein_coding	TBK1 binding protein 1
chr11	97037456	97038199	-	97037459	97038199	A3SS	0.5	50	50	ENSMUST00000066078.12	ENSMUSG00000038517.16	Tbkbp1	chr11	protein_coding	TBK1 binding protein 1
chr11	97040441	97041785	-	97040441	97040817	5pMXE	0.33	50	50	ENSMUST00000118375.8	ENSMUSG00000038517.16	Tbkbp1	chr11	protein_coding	TBK1 binding protein 1
chr11	97040441	97042200	-	97040441	97040817	5pMXE	0.33	50	50	ENSMUST00000118375.8	ENSMUSG00000038517.16	Tbkbp1	chr11	protein_coding	TBK1 binding protein 1
chr11	97040441	97042200	-	97040441	97041785	5pMXE	0.33	50	50	ENSMUST00000107614.8	ENSMUSG00000038517.16	Tbkbp1	chr11	protein_coding	TBK1 binding protein 1
chr11	97126995	97131755	-	97126995;97129084	97128920;97131755	ES	0.5	50	50	ENSMUST00000167806.8	ENSMUSG00000001441.14	Npepps	chr11	protein_coding	aminopeptidase puromycin sensitive
chr11	97133629	97139028	-	97133629;97135361	97135254;97139028	ES	0.5	50	50	ENSMUST00000167806.8	ENSMUSG00000001441.14	Npepps	chr11	protein_coding	aminopeptidase puromycin sensitive
chr11	97139149;97141569	97141454;97149100	-	97139149	97149100	cassetteExon	0.5	100	100	ENSMUST00000167806.8	ENSMUSG00000001441.14	Npepps	chr11	protein_coding	aminopeptidase puromycin sensitive
chr11	97149177;97154852	97154722;97158421	-	97149177	97158421	cassetteExon	0.5	100	100	ENSMUST00000167806.8	ENSMUSG00000001441.14	Npepps	chr11	protein_coding	aminopeptidase puromycin sensitive
chr11	97104013	97104597	-	97096960	97104597	A3SS	0.5	50	50	ENSMUST00000167806.8	ENSMUSG00000001441.14	Npepps	chr11	protein_coding	aminopeptidase puromycin sensitive
chr11	97113996	97115485	-	97104704	97115485	A3SS	0.5	50	50	ENSMUST00000167806.8	ENSMUSG00000001441.14	Npepps	chr11	protein_coding	aminopeptidase puromycin sensitive
chr11	97127047	97128920	-	97126995	97128920	A3SS	0.5	50	50	ENSMUST00000167806.8	ENSMUSG00000001441.14	Npepps	chr11	protein_coding	aminopeptidase puromycin sensitive
chr11	97104704	97108617	-	97104704	97115485	A5SS	0.5	50	50	ENSMUST00000167806.8	ENSMUSG00000001441.14	Npepps	chr11	protein_coding	aminopeptidase puromycin sensitive
chr11	97131869	97132453	-	97131869	97132630	A5SS	0.5	50	50	ENSMUST00000167806.8	ENSMUSG00000001441.14	Npepps	chr11	protein_coding	aminopeptidase puromycin sensitive
chr11	97135361	97139058	-	97135361	97139028	A5SS	0.5	50	50	ENSMUST00000167806.8	ENSMUSG00000001441.14	Npepps	chr11	protein_coding	aminopeptidase puromycin sensitive
chr11	97103153	97103858	-	97096917	97103858	A3SS	0.5	50	50	ENSMUST00000172108.8	ENSMUSG00000001441.14	Npepps	chr11	protein_coding	aminopeptidase puromycin sensitive
chr11	97126995	97131755	-	97129084	97131755	A3SS&ES	0.5	50	50	ENSMUST00000165489.8	ENSMUSG00000001441.14	Npepps	chr11	protein_coding	aminopeptidase puromycin sensitive
chr11	97133629	97139028	-	97133629	97135254	A5SS&ES	0.5	50	50	ENSMUST00000168743.8	ENSMUSG00000001441.14	Npepps	chr11	protein_coding	aminopeptidase puromycin sensitive
chr11	97133629	97139028	-	97135361	97139028	3pMXE	0.5	50	50	ENSMUST00000154917.8	ENSMUSG00000001441.14	Npepps	chr11	protein_coding	aminopeptidase puromycin sensitive
chr11	97268512	97268762	+	97267924	97268762	A5SS	0.5	50	50	ENSMUST00000238729.2	ENSMUSG00000038485.7	Socs7	chr11	protein_coding	suppressor of cytokine signaling 7
chr11	97382056;97382492	97382470;97383877	+	97382056	97383877	cassetteExon	0.5	100	100	ENSMUST00000121799.8	ENSMUSG00000049807.17	Arhgap23	chr11	protein_coding	Rho GTPase activating protein 23
chr11	97328157	97335010	+	97306493	97335010	A5SS	0.5	50	50	ENSMUST00000121799.8	ENSMUSG00000049807.17	Arhgap23	chr11	protein_coding	Rho GTPase activating protein 23
chr11	97341191	97342218	+	97339533	97342218	A5SS	0.5	50	50	ENSMUST00000121799.8	ENSMUSG00000049807.17	Arhgap23	chr11	protein_coding	Rho GTPase activating protein 23
chr11	97409582;97413321	97413199;97413916	-	97409582	97413916	cassetteExon	0.5	100	100	ENSMUST00000238233.2	ENSMUSG00000038453.18	Srcin1	chr11	protein_coding	SRC kinase signaling inhibitor 1
chr11	97403761	97409436	-	97403474	97409436	A3SS	0.5	50	50	ENSMUST00000238233.2	ENSMUSG00000038453.18	Srcin1	chr11	protein_coding	SRC kinase signaling inhibitor 1
chr11	97428065	97439706	-	97428065;97433383	97433360;97439706	ES	0.5	50	50	ENSMUST00000107596.9	ENSMUSG00000038453.18	Srcin1	chr11	protein_coding	SRC kinase signaling inhibitor 1
chr11	97433383	97442503	-	97433383;97439804	97439706;97442503	ES	0.5	50	50	ENSMUST00000107596.9	ENSMUSG00000038453.18	Srcin1	chr11	protein_coding	SRC kinase signaling inhibitor 1
chr11	97442804	97457537	-	97442804	97465794	A5SS	0.25	50	50	ENSMUST00000107596.9	ENSMUSG00000038453.18	Srcin1	chr11	protein_coding	SRC kinase signaling inhibitor 1
chr11	97442804	97464622	-	97442804	97465794	A5SS	0.25	50	50	ENSMUST00000107596.9	ENSMUSG00000038453.18	Srcin1	chr11	protein_coding	SRC kinase signaling inhibitor 1
chr11	97442804	97465743	-	97442804	97465794	A5SS	0.25	50	50	ENSMUST00000107596.9	ENSMUSG00000038453.18	Srcin1	chr11	protein_coding	SRC kinase signaling inhibitor 1
chr11	97428065;97439804	97439706;97442503	-	97428065;97433383	97433360;97442503	MXE	0.5	100	100	ENSMUST00000238314.2	ENSMUSG00000038453.18	Srcin1	chr11	protein_coding	SRC kinase signaling inhibitor 1
chr11	97410999	97413199	-	97409582	97413199	A3SS	0.5	50	50	ENSMUST00000238314.2	ENSMUSG00000038453.18	Srcin1	chr11	protein_coding	SRC kinase signaling inhibitor 1
chr11	97442804	97465743	-	97442804	97464622	5pMXE	0.25	50	50	ENSMUST00000107593.8	ENSMUSG00000038453.18	Srcin1	chr11	protein_coding	SRC kinase signaling inhibitor 1
chr11	97442804;97457599	97457537;97464622	-	97442804	97464622	cassetteExon	0.5	100	100	ENSMUST00000107593.8	ENSMUSG00000038453.18	Srcin1	chr11	protein_coding	SRC kinase signaling inhibitor 1
chr11	97410999	97411958	-	97410999	97413199	A5SS	0.5	50	50	ENSMUST00000238342.2	ENSMUSG00000038453.18	Srcin1	chr11	protein_coding	SRC kinase signaling inhibitor 1
chr11	97457599	97466915	-	97457599	97464622	5pMXE	0.5	50	50	ENSMUST00000207653.2	ENSMUSG00000038453.18	Srcin1	chr11	protein_coding	SRC kinase signaling inhibitor 1
chr11	97442804	97457537	-	97442804	97465743	A5SS	0.25	50	50	ENSMUST00000142123.2	ENSMUSG00000038453.18	Srcin1	chr11	protein_coding	SRC kinase signaling inhibitor 1
chr11	97555860	97556556	+	97555860;97556366	97556312;97556556	ES	0.5	50	50	ENSMUST00000044730.12	ENSMUSG00000038437.12	Mllt6	chr11	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 6
chr11	97557994	97561079	+	97557994;97560462	97560250;97561079	ES	0.5	50	50	ENSMUST00000044730.12	ENSMUSG00000038437.12	Mllt6	chr11	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 6
chr11	97567885	97569140	+	97567885;97568062	97567974;97569140	ES	0.5	50	50	ENSMUST00000044730.12	ENSMUSG00000038437.12	Mllt6	chr11	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 6
chr11	97563508	97564286	+	97563418	97564286	A5SS	0.5	50	50	ENSMUST00000044730.12	ENSMUSG00000038437.12	Mllt6	chr11	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 6
chr11	97576747	97577009	+	97576690	97577009	A5SS	0.33	50	50	ENSMUST00000107584.8	ENSMUSG00000078695.9	Cisd3	chr11	protein_coding	CDGSH iron sulfur domain 3
chr11	97576888	97577009	+	97576690	97577009	A5SS	0.33	50	50	ENSMUST00000107584.8	ENSMUSG00000078695.9	Cisd3	chr11	protein_coding	CDGSH iron sulfur domain 3
chr11	97576888	97577009	+	97576747	97577009	A5SS	0.33	50	50	ENSMUST00000107585.9	ENSMUSG00000078695.9	Cisd3	chr11	protein_coding	CDGSH iron sulfur domain 3
chr11	97584394	97590032	-	97584394;97588886	97588815;97590032	ES	0.5	50	50	ENSMUST00000179765.8	ENSMUSG00000018537.17	Pcgf2	chr11	protein_coding	polycomb group ring finger 2
chr11	97582601	97582684	-	97582605	97582684	A3SS	0.5	50	50	ENSMUST00000179765.8	ENSMUSG00000018537.17	Pcgf2	chr11	protein_coding	polycomb group ring finger 2
chr11	97588281	97588815	-	97584394	97588815	A3SS	0.5	50	50	ENSMUST00000179765.8	ENSMUSG00000018537.17	Pcgf2	chr11	protein_coding	polycomb group ring finger 2
chr11	97584394;97590126	97590032;97590362	-	97584394	97590362	cassetteExon	0.5	100	100	ENSMUST00000169807.8	ENSMUSG00000018537.17	Pcgf2	chr11	protein_coding	polycomb group ring finger 2
chr11	97584394	97588815	-	97584394	97590362	A5SS	0.33	50	50	ENSMUST00000169807.8	ENSMUSG00000018537.17	Pcgf2	chr11	protein_coding	polycomb group ring finger 2
chr11	97615351;97615851	97615701;97617531	-	97615351	97617531	cassetteExon	0.5	100	100	ENSMUST00000018691.9	ENSMUSG00000018547.9	Pip4k2b	chr11	protein_coding	phosphatidylinositol-5-phosphate 4-kinase, type II, beta
chr11	97672715;97672867	97672829;97673170	-	97672715	97673170	cassetteExon	0.5	100	100	ENSMUST00000103146.5	ENSMUSG00000071415.7	Rpl23	chr11	protein_coding	ribosomal protein L23
chr11	97672715	97673170	-	97672715	97672829	5pMXE	0.5	50	50	ENSMUST00000151118.2	ENSMUSG00000071415.7	Rpl23	chr11	protein_coding	ribosomal protein L23
chr11	97672715	97673170	-	97672867	97673170	A3SS	0.5	50	50	ENSMUST00000128801.2	ENSMUSG00000071415.7	Rpl23	chr11	protein_coding	ribosomal protein L23
chr11	97690800	97697651	+	97690688	97697651	A5SS	0.11	50	50	ENSMUST00000143571.2	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97690918	97697651	+	97690688	97697651	A5SS	0.11	50	50	ENSMUST00000143571.2	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97691066	97697651	+	97690688	97697651	A5SS	0.11	50	50	ENSMUST00000143571.2	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97691197	97697651	+	97690688	97697651	A5SS	0.11	50	50	ENSMUST00000143571.2	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97691940	97697651	+	97690688	97697651	A5SS	0.11	50	50	ENSMUST00000143571.2	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97692960	97697651	+	97690688	97697651	A5SS	0.11	50	50	ENSMUST00000143571.2	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97696106	97697651	+	97690688	97697651	A5SS	0.11	50	50	ENSMUST00000143571.2	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97697171	97697651	+	97690688	97697651	A5SS	0.11	50	50	ENSMUST00000143571.2	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97706190	97706524	+	97697745	97706524	A5SS	0.5	50	50	ENSMUST00000043843.12	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97690918	97697651	+	97690800	97697651	A5SS	0.11	50	50	ENSMUST00000129558.8	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97691066	97697651	+	97690800	97697651	A5SS	0.11	50	50	ENSMUST00000129558.8	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97691197	97697651	+	97690800	97697651	A5SS	0.11	50	50	ENSMUST00000129558.8	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97691940	97697651	+	97690800	97697651	A5SS	0.11	50	50	ENSMUST00000129558.8	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97692960	97697651	+	97690800	97697651	A5SS	0.11	50	50	ENSMUST00000129558.8	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97696106	97697651	+	97690800	97697651	A5SS	0.11	50	50	ENSMUST00000129558.8	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97697171	97697651	+	97690800	97697651	A5SS	0.11	50	50	ENSMUST00000129558.8	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97691066	97697651	+	97690918	97697651	A5SS	0.11	50	50	ENSMUST00000152962.8	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97691197	97697651	+	97690918	97697651	A5SS	0.11	50	50	ENSMUST00000152962.8	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97691940	97697651	+	97690918	97697651	A5SS	0.11	50	50	ENSMUST00000152962.8	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97692960	97697651	+	97690918	97697651	A5SS	0.11	50	50	ENSMUST00000152962.8	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97696106	97697651	+	97690918	97697651	A5SS	0.11	50	50	ENSMUST00000152962.8	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97697171	97697651	+	97690918	97697651	A5SS	0.11	50	50	ENSMUST00000152962.8	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97691197	97697651	+	97691066	97697651	A5SS	0.11	50	50	ENSMUST00000146572.8	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97691940	97697651	+	97691066	97697651	A5SS	0.11	50	50	ENSMUST00000146572.8	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97692960	97697651	+	97691066	97697651	A5SS	0.11	50	50	ENSMUST00000146572.8	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97696106	97697651	+	97691066	97697651	A5SS	0.11	50	50	ENSMUST00000146572.8	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97697171	97697651	+	97691066	97697651	A5SS	0.11	50	50	ENSMUST00000146572.8	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97691940	97697651	+	97691197	97697651	A5SS	0.11	50	50	ENSMUST00000136723.8	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97692960	97697651	+	97691197	97697651	A5SS	0.11	50	50	ENSMUST00000136723.8	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97696106	97697651	+	97691197	97697651	A5SS	0.11	50	50	ENSMUST00000136723.8	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97697171	97697651	+	97691197	97697651	A5SS	0.11	50	50	ENSMUST00000136723.8	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97692960	97697651	+	97691940	97697651	A5SS	0.2	50	50	ENSMUST00000134428.2	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97696106	97697651	+	97691940	97697651	A5SS	0.2	50	50	ENSMUST00000134428.2	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97697171	97697651	+	97691940	97697651	A5SS	0.2	50	50	ENSMUST00000134428.2	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97696106	97697651	+	97692960	97697651	A5SS	0.11	50	50	ENSMUST00000127033.9	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97697171	97697651	+	97692960	97697651	A5SS	0.11	50	50	ENSMUST00000127033.9	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97697171	97697651	+	97696106	97697651	A5SS	0.11	50	50	ENSMUST00000148280.3	ENSMUSG00000038366.16	Lasp1	chr11	protein_coding	LIM and SH3 protein 1
chr11	97732373	97733010	+	97732402	97733010	A5SS	0.33	50	50	ENSMUST00000054783.5	ENSMUSG00000050538.9	B230217C12Rik	chr11	protein_coding	RIKEN cDNA B230217C12 gene
chr11	97732390	97733010	+	97732402	97733010	A5SS	0.33	50	50	ENSMUST00000054783.5	ENSMUSG00000050538.9	B230217C12Rik	chr11	protein_coding	RIKEN cDNA B230217C12 gene
chr11	97732373	97733010	+	97732390	97733010	A5SS	0.33	50	50	ENSMUST00000155954.3	ENSMUSG00000050538.9	B230217C12Rik	chr11	protein_coding	RIKEN cDNA B230217C12 gene
chr11	97846349	97847249	-	97846349;97846994	97846925;97847249	ES	0.5	50	50	ENSMUST00000017561.15	ENSMUSG00000017417.15	Plxdc1	chr11	protein_coding	plexin domain containing 1
chr11	97845654	97846227	-	97845695	97846227	A3SS	0.5	50	50	ENSMUST00000017561.15	ENSMUSG00000017417.15	Plxdc1	chr11	protein_coding	plexin domain containing 1
chr11	97847413	97869329	-	97847392	97869329	A3SS	0.5	50	50	ENSMUST00000017561.15	ENSMUSG00000017417.15	Plxdc1	chr11	protein_coding	plexin domain containing 1
chr11	97901202	97902692	-	97901202;97901472	97901453;97902692	ES	0.33	50	50	ENSMUST00000017552.13	ENSMUSG00000020882.18	Cacnb1	chr11	protein_coding	calcium channel, voltage-dependent, beta 1 subunit
chr11	97910592	97913713	-	97910592	97913168	5pMXE	0.5	50	50	ENSMUST00000017552.13	ENSMUSG00000020882.18	Cacnb1	chr11	protein_coding	calcium channel, voltage-dependent, beta 1 subunit
chr11	97901202;97902323	97902169;97902692	-	97901202;97901472	97901453;97902692	MXE	0.5	100	100	ENSMUST00000017552.13	ENSMUSG00000020882.18	Cacnb1	chr11	protein_coding	calcium channel, voltage-dependent, beta 1 subunit
chr11	97894188	97895850	-	97894188	97895955	A5SS	0.5	50	50	ENSMUST00000017552.13	ENSMUSG00000020882.18	Cacnb1	chr11	protein_coding	calcium channel, voltage-dependent, beta 1 subunit
chr11	97900742	97900830	-	97900742	97901122	A5SS	0.5	50	50	ENSMUST00000017552.13	ENSMUSG00000020882.18	Cacnb1	chr11	protein_coding	calcium channel, voltage-dependent, beta 1 subunit
chr11	97903147	97903322	-	97903147	97903638	A5SS	0.5	50	50	ENSMUST00000017552.13	ENSMUSG00000020882.18	Cacnb1	chr11	protein_coding	calcium channel, voltage-dependent, beta 1 subunit
chr11	97907668	97909099	-	97907668	97910506	A5SS	0.5	50	50	ENSMUST00000017552.13	ENSMUSG00000020882.18	Cacnb1	chr11	protein_coding	calcium channel, voltage-dependent, beta 1 subunit
chr11	97901202	97902692	-	97901202;97902323	97902169;97902692	ES	0.33	50	50	ENSMUST00000103144.10	ENSMUSG00000020882.18	Cacnb1	chr11	protein_coding	calcium channel, voltage-dependent, beta 1 subunit
chr11	97917816	97918649	+	97917588	97918649	A5SS	0.5	50	50	ENSMUST00000092425.11	ENSMUSG00000017404.13	Rpl19	chr11	protein_coding	ribosomal protein L19
chr11	97931345;97931831	97931743;97931965	-	97931345	97931965	cassetteExon	0.5	100	100	ENSMUST00000017544.9	ENSMUSG00000017400.11	Stac2	chr11	protein_coding	SH3 and cysteine rich domain 2
chr11	97932405;97933680	97933355;97934306	-	97932405	97934306	cassetteExon	0.5	100	100	ENSMUST00000131519.2	ENSMUSG00000017400.11	Stac2	chr11	protein_coding	SH3 and cysteine rich domain 2
chr11	97992622	98001761	-	97992622;98000388	98000320;98001761	ES	0.5	50	50	ENSMUST00000103143.10	ENSMUSG00000020883.19	Fbxl20	chr11	protein_coding	F-box and leucine-rich repeat protein 20
chr11	98004121	98019141	-	98004121;98006273	98006219;98019141	ES	0.5	50	50	ENSMUST00000103143.10	ENSMUSG00000020883.19	Fbxl20	chr11	protein_coding	F-box and leucine-rich repeat protein 20
chr11	98019202	98040942	-	98019202	98040142	5pMXE	0.33	50	50	ENSMUST00000103143.10	ENSMUSG00000020883.19	Fbxl20	chr11	protein_coding	F-box and leucine-rich repeat protein 20
chr11	97986329	97987755	-	97986019	97987755	A3SS	0.5	50	50	ENSMUST00000103143.10	ENSMUSG00000020883.19	Fbxl20	chr11	protein_coding	F-box and leucine-rich repeat protein 20
chr11	98019202	98019694	-	98019202	98040142	A5SS	0.33	50	50	ENSMUST00000103143.10	ENSMUSG00000020883.19	Fbxl20	chr11	protein_coding	F-box and leucine-rich repeat protein 20
chr11	98019202	98019694	-	98019202	98040942	A5SS	0.33	50	50	ENSMUST00000150378.8	ENSMUSG00000020883.19	Fbxl20	chr11	protein_coding	F-box and leucine-rich repeat protein 20
chr11	97992622	98001761	-	98000388	98001761	3pMXE	0.5	50	50	ENSMUST00000149327.3	ENSMUSG00000020883.19	Fbxl20	chr11	protein_coding	F-box and leucine-rich repeat protein 20
chr11	98043951	98049155	-	98043789	98049155	A3SS	0.33	50	50	ENSMUST00000092735.12	ENSMUSG00000018160.16	Med1	chr11	protein_coding	mediator complex subunit 1
chr11	98048960	98049155	-	98043789	98049155	A3SS	0.33	50	50	ENSMUST00000092735.12	ENSMUSG00000018160.16	Med1	chr11	protein_coding	mediator complex subunit 1
chr11	98061266	98061774	-	98060278	98061774	A3SS	0.5	50	50	ENSMUST00000092735.12	ENSMUSG00000018160.16	Med1	chr11	protein_coding	mediator complex subunit 1
chr11	98069966	98070774	-	98069966	98070843	A5SS	0.5	50	50	ENSMUST00000092735.12	ENSMUSG00000018160.16	Med1	chr11	protein_coding	mediator complex subunit 1
chr11	98080114	98083633	-	98080114	98083885	A5SS	0.5	50	50	ENSMUST00000092735.12	ENSMUSG00000018160.16	Med1	chr11	protein_coding	mediator complex subunit 1
chr11	98048960	98049155	-	98043951	98049155	A3SS	0.33	50	50	ENSMUST00000126483.8	ENSMUSG00000018160.16	Med1	chr11	protein_coding	mediator complex subunit 1
chr11	98136495	98140509	+	98136495	98140536	A3SS	0.5	50	50	ENSMUST00000107539.8	ENSMUSG00000003119.15	Cdk12	chr11	protein_coding	cyclin-dependent kinase 12
chr11	98247773	98247838	+	98247773	98247859	A3SS	0.5	50	50	ENSMUST00000078694.13	ENSMUSG00000061718.13	Ppp1r1b	chr11	protein_coding	protein phosphatase 1, regulatory inhibitor subunit 1B
chr11	98240936	98241395	+	98240000	98241395	A5SS	0.5	50	50	ENSMUST00000078694.13	ENSMUSG00000061718.13	Ppp1r1b	chr11	protein_coding	protein phosphatase 1, regulatory inhibitor subunit 1B
chr11	98242529	98246153	+	98242167	98246153	A5SS	0.33	50	50	ENSMUST00000078694.13	ENSMUSG00000061718.13	Ppp1r1b	chr11	protein_coding	protein phosphatase 1, regulatory inhibitor subunit 1B
chr11	98245458	98246153	+	98242167	98246153	A5SS	0.33	50	50	ENSMUST00000078694.13	ENSMUSG00000061718.13	Ppp1r1b	chr11	protein_coding	protein phosphatase 1, regulatory inhibitor subunit 1B
chr11	98245458	98246153	+	98242529	98246153	A5SS	0.33	50	50	ENSMUST00000133700.8	ENSMUSG00000061718.13	Ppp1r1b	chr11	protein_coding	protein phosphatase 1, regulatory inhibitor subunit 1B
chr11	98263168;98264396	98264234;98265906	+	98263168	98265906	cassetteExon	0.5	100	100	ENSMUST00000018311.5	ENSMUSG00000018167.11	Stard3	chr11	protein_coding	START domain containing 3
chr11	98263168	98265830	+	98263168	98265906	A3SS	0.33	50	50	ENSMUST00000018311.5	ENSMUSG00000018167.11	Stard3	chr11	protein_coding	START domain containing 3
chr11	98266554	98267324	+	98266554	98267316	A3SS	0.5	50	50	ENSMUST00000018311.5	ENSMUSG00000018167.11	Stard3	chr11	protein_coding	START domain containing 3
chr11	98266366	98266501	+	98266379	98266501	A5SS	0.5	50	50	ENSMUST00000018311.5	ENSMUSG00000018167.11	Stard3	chr11	protein_coding	START domain containing 3
chr11	98263168	98265830	+	98263168	98264234	A3SS&ES	0.33	50	50	ENSMUST00000154960.8	ENSMUSG00000018167.11	Stard3	chr11	protein_coding	START domain containing 3
chr11	98277692	98278219	+	98277692	98278163	A3SS	0.5	50	50	ENSMUST00000041301.8	ENSMUSG00000038216.8	Pnmt	chr11	protein_coding	phenylethanolamine-N-methyltransferase
chr11	98282583	98288722	-	98282583	98282763	5pMXE	0.33	50	50	ENSMUST00000041218.6	ENSMUSG00000038208.14	Pgap3	chr11	protein_coding	post-GPI attachment to proteins 3
chr11	98282583	98289711	-	98282583	98282763	5pMXE	0.33	50	50	ENSMUST00000041218.6	ENSMUSG00000038208.14	Pgap3	chr11	protein_coding	post-GPI attachment to proteins 3
chr11	98282583	98289711	-	98282583;98288874	98288722;98289711	ES	0.5	50	50	ENSMUST00000090827.12	ENSMUSG00000038208.14	Pgap3	chr11	protein_coding	post-GPI attachment to proteins 3
chr11	98338075	98341592	+	98337381	98341592	A5SS	0.5	50	50	ENSMUST00000132771.8	ENSMUSG00000019312.11	Grb7	chr11	protein_coding	growth factor receptor bound protein 7
chr11	98375669	98376400	-	98367869	98376400	A3SS	0.5	50	50	ENSMUST00000103141.4	ENSMUSG00000018168.9	Ikzf3	chr11	protein_coding	IKAROS family zinc finger 3
chr11	98367869	98368106	-	98367869	98376400	A5SS	0.5	50	50	ENSMUST00000103141.4	ENSMUSG00000018168.9	Ikzf3	chr11	protein_coding	IKAROS family zinc finger 3
chr11	98442148	98443284	+	98442148;98442334	98442269;98443284	ES	0.5	50	50	ENSMUST00000081033.13	ENSMUSG00000017195.16	Zpbp2	chr11	protein_coding	zona pellucida binding protein 2
chr11	98444810;98445595	98445377;98446313	+	98444810	98446313	cassetteExon	0.5	100	100	ENSMUST00000081033.13	ENSMUSG00000017195.16	Zpbp2	chr11	protein_coding	zona pellucida binding protein 2
chr11	98442057	98442269	+	98442148	98442269	A5SS	0.5	50	50	ENSMUST00000081033.13	ENSMUSG00000017195.16	Zpbp2	chr11	protein_coding	zona pellucida binding protein 2
chr11	98442148	98443284	+	98442334	98443284	A5SS&ES	0.5	50	50	ENSMUST00000107511.8	ENSMUSG00000017195.16	Zpbp2	chr11	protein_coding	zona pellucida binding protein 2
chr11	98523822	98526032	+	98523822;98524166	98524140;98526032	ES	0.5	50	50	ENSMUST00000073295.3	ENSMUSG00000064224.11	Gsdma3	chr11	protein_coding	gasdermin A3
chr11	98538113;98538287	98538253;98539875	+	98538113	98539875	cassetteExon	0.5	100	100	ENSMUST00000093938.10	ENSMUSG00000017211.15	Gsdma2	chr11	protein_coding	gasdermin A2
chr11	98537680	98538021	+	98537680	98538083	A3SS	0.5	50	50	ENSMUST00000093938.10	ENSMUSG00000017211.15	Gsdma2	chr11	protein_coding	gasdermin A2
chr11	98540093	98542800	+	98540093	98540297	3pMXE	0.5	50	50	ENSMUST00000127692.8	ENSMUSG00000017211.15	Gsdma2	chr11	protein_coding	gasdermin A2
chr11	98541832	98542800	+	98540093	98542800	A5SS	0.5	50	50	ENSMUST00000017355.12	ENSMUSG00000017211.15	Gsdma2	chr11	protein_coding	gasdermin A2
chr11	98581845	98584137	+	98581845	98584209	A3SS	0.5	50	50	ENSMUST00000017365.15	ENSMUSG00000017221.15	Psmd3	chr11	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 3
chr11	98598627	98598759	-	98598627	98600408	A5SS	0.5	50	50	ENSMUST00000125064.8	ENSMUSG00000017210.15	Med24	chr11	protein_coding	mediator complex subunit 24
chr11	98609396	98609491	-	98609396	98609644	A5SS	0.5	50	50	ENSMUST00000125064.8	ENSMUSG00000017210.15	Med24	chr11	protein_coding	mediator complex subunit 24
chr11	98619523	98619604	-	98619523	98619611	A5SS	0.5	50	50	ENSMUST00000125064.8	ENSMUSG00000017210.15	Med24	chr11	protein_coding	mediator complex subunit 24
chr11	98607351;98608591	98608535;98608736	-	98607351	98608736	cassetteExon	0.5	100	100	ENSMUST00000017354.13	ENSMUSG00000017210.15	Med24	chr11	protein_coding	mediator complex subunit 24
chr11	98619813	98620130	-	98619813	98620198	A5SS	0.33	50	50	ENSMUST00000017354.13	ENSMUSG00000017210.15	Med24	chr11	protein_coding	mediator complex subunit 24
chr11	98619813	98620207	-	98619813	98620198	A5SS	0.33	50	50	ENSMUST00000017354.13	ENSMUSG00000017210.15	Med24	chr11	protein_coding	mediator complex subunit 24
chr11	98619813	98620207	-	98619813	98620130	5pMXE	0.33	50	50	ENSMUST00000138750.8	ENSMUSG00000017210.15	Med24	chr11	protein_coding	mediator complex subunit 24
chr11	98632273	98644116	+	98632273;98641036	98640889;98644116	ES	0.16	50	50	ENSMUST00000142944.8	ENSMUSG00000058756.14	Thra	chr11	protein_coding	thyroid hormone receptor alpha
chr11	98631656	98644116	+	98641036	98644116	A5SS&ES	0.16	50	50	ENSMUST00000142944.8	ENSMUSG00000058756.14	Thra	chr11	protein_coding	thyroid hormone receptor alpha
chr11	98631845	98632184	+	98631513	98632184	A5SS	0.5	50	50	ENSMUST00000142944.8	ENSMUSG00000058756.14	Thra	chr11	protein_coding	thyroid hormone receptor alpha
chr11	98632832	98644116	+	98641036	98644116	A5SS&ES	0.16	50	50	ENSMUST00000142944.8	ENSMUSG00000058756.14	Thra	chr11	protein_coding	thyroid hormone receptor alpha
chr11	98633028	98644116	+	98641036	98644116	A5SS&ES	0.16	50	50	ENSMUST00000142944.8	ENSMUSG00000058756.14	Thra	chr11	protein_coding	thyroid hormone receptor alpha
chr11	98635224	98644116	+	98641036	98644116	A5SS&ES	0.16	50	50	ENSMUST00000142944.8	ENSMUSG00000058756.14	Thra	chr11	protein_coding	thyroid hormone receptor alpha
chr11	98632273	98644116	+	98631656	98644116	A5SS	0.16	50	50	ENSMUST00000153468.8	ENSMUSG00000058756.14	Thra	chr11	protein_coding	thyroid hormone receptor alpha
chr11	98632832	98644116	+	98631656	98644116	A5SS	0.16	50	50	ENSMUST00000153468.8	ENSMUSG00000058756.14	Thra	chr11	protein_coding	thyroid hormone receptor alpha
chr11	98633028	98644116	+	98631656	98644116	A5SS	0.16	50	50	ENSMUST00000153468.8	ENSMUSG00000058756.14	Thra	chr11	protein_coding	thyroid hormone receptor alpha
chr11	98635224	98644116	+	98631656	98644116	A5SS	0.16	50	50	ENSMUST00000153468.8	ENSMUSG00000058756.14	Thra	chr11	protein_coding	thyroid hormone receptor alpha
chr11	98632832	98644116	+	98632273	98644116	A5SS	0.2	50	50	ENSMUST00000124130.2	ENSMUSG00000058756.14	Thra	chr11	protein_coding	thyroid hormone receptor alpha
chr11	98633028	98644116	+	98632273	98644116	A5SS	0.2	50	50	ENSMUST00000124130.2	ENSMUSG00000058756.14	Thra	chr11	protein_coding	thyroid hormone receptor alpha
chr11	98635224	98644116	+	98632273	98644116	A5SS	0.2	50	50	ENSMUST00000124130.2	ENSMUSG00000058756.14	Thra	chr11	protein_coding	thyroid hormone receptor alpha
chr11	98633028	98644116	+	98632832	98644116	A5SS	0.16	50	50	ENSMUST00000152195.7	ENSMUSG00000058756.14	Thra	chr11	protein_coding	thyroid hormone receptor alpha
chr11	98635224	98644116	+	98632832	98644116	A5SS	0.16	50	50	ENSMUST00000152195.7	ENSMUSG00000058756.14	Thra	chr11	protein_coding	thyroid hormone receptor alpha
chr11	98655231	98659100	+	98655231	98658983	A3SS	0.5	50	50	ENSMUST00000064187.12	ENSMUSG00000058756.14	Thra	chr11	protein_coding	thyroid hormone receptor alpha
chr11	98635224	98644116	+	98633028	98644116	A5SS	0.16	50	50	ENSMUST00000153043.8	ENSMUSG00000058756.14	Thra	chr11	protein_coding	thyroid hormone receptor alpha
chr11	98691208	98693608	+	98691208;98693141	98693094;98693608	ES	0.5	50	50	ENSMUST00000037915.9	ENSMUSG00000052915.15	Msl1	chr11	protein_coding	male specific lethal 1
chr11	98694796	98694906	+	98694796	98695128	A3SS	0.5	50	50	ENSMUST00000037915.9	ENSMUSG00000052915.15	Msl1	chr11	protein_coding	male specific lethal 1
chr11	98689578	98689966	+	98687430	98689966	A5SS	0.5	50	50	ENSMUST00000037915.9	ENSMUSG00000052915.15	Msl1	chr11	protein_coding	male specific lethal 1
chr11	98695812	98700502	-	98692853	98700502	A3SS	0.5	50	50	ENSMUST00000153181.8	ENSMUSG00000075576.13	Gm12359	chr11	lncRNA	predicted gene 12359
chr11	98701012	98701285	+	98700917	98701285	A5SS	0.5	50	50	ENSMUST00000017384.14	ENSMUSG00000078676.10	Casc3	chr11	protein_coding	cancer susceptibility candidate 3
chr11	98701792	98712257	+	98701761	98712257	A5SS	0.5	50	50	ENSMUST00000017384.14	ENSMUSG00000078676.10	Casc3	chr11	protein_coding	cancer susceptibility candidate 3
chr11	98754728	98775800	+	98754505	98775800	A5SS	0.33	50	50	ENSMUST00000142414.8	ENSMUSG00000038013.15	Wipf2	chr11	protein_coding	WAS/WASL interacting protein family, member 2
chr11	98754966	98775800	+	98754505	98775800	A5SS	0.33	50	50	ENSMUST00000142414.8	ENSMUSG00000038013.15	Wipf2	chr11	protein_coding	WAS/WASL interacting protein family, member 2
chr11	98782237	98782322	+	98781658	98782322	A5SS	0.5	50	50	ENSMUST00000142414.8	ENSMUSG00000038013.15	Wipf2	chr11	protein_coding	WAS/WASL interacting protein family, member 2
chr11	98754966	98775800	+	98754728	98775800	A5SS	0.33	50	50	ENSMUST00000037480.9	ENSMUSG00000038013.15	Wipf2	chr11	protein_coding	WAS/WASL interacting protein family, member 2
chr11	98807844;98808970	98808736;98810029	+	98807844	98810029	cassetteExon	0.5	100	100	ENSMUST00000092706.13	ENSMUSG00000017499.16	Cdc6	chr11	protein_coding	cell division cycle 6
chr11	98801603	98802217	+	98801603	98802214	A3SS	0.5	50	50	ENSMUST00000092706.13	ENSMUSG00000017499.16	Cdc6	chr11	protein_coding	cell division cycle 6
chr11	98799145	98799463	+	98798807	98799463	A5SS	0.5	50	50	ENSMUST00000092706.13	ENSMUSG00000017499.16	Cdc6	chr11	protein_coding	cell division cycle 6
chr11	98828705	98841071	+	98818736	98841071	A5SS	0.25	50	50	ENSMUST00000107474.8	ENSMUSG00000037992.17	Rara	chr11	protein_coding	retinoic acid receptor, alpha
chr11	98830598	98841071	+	98818736	98841071	A5SS	0.25	50	50	ENSMUST00000107474.8	ENSMUSG00000037992.17	Rara	chr11	protein_coding	retinoic acid receptor, alpha
chr11	98838551	98841071	+	98818736	98841071	A5SS	0.25	50	50	ENSMUST00000107474.8	ENSMUSG00000037992.17	Rara	chr11	protein_coding	retinoic acid receptor, alpha
chr11	98851959	98857173	+	98841621	98857173	A5SS	0.5	50	50	ENSMUST00000107474.8	ENSMUSG00000037992.17	Rara	chr11	protein_coding	retinoic acid receptor, alpha
chr11	98828705;98838551	98838397;98841071	+	98828705	98841071	cassetteExon	0.5	100	100	ENSMUST00000107475.9	ENSMUSG00000037992.17	Rara	chr11	protein_coding	retinoic acid receptor, alpha
chr11	98830598	98841071	+	98828705	98841071	A5SS	0.25	50	50	ENSMUST00000107475.9	ENSMUSG00000037992.17	Rara	chr11	protein_coding	retinoic acid receptor, alpha
chr11	98829237	98838397	+	98828705	98838397	A5SS	0.5	50	50	ENSMUST00000068133.10	ENSMUSG00000037992.17	Rara	chr11	protein_coding	retinoic acid receptor, alpha
chr11	98830598	98841071	+	98838551	98841071	A5SS&ES	0.33	50	50	ENSMUST00000068133.10	ENSMUSG00000037992.17	Rara	chr11	protein_coding	retinoic acid receptor, alpha
chr11	98884151	98884590	-	98884239	98884590	A3SS	0.5	50	50	ENSMUST00000068031.8	ENSMUSG00000020914.18	Top2a	chr11	protein_coding	topoisomerase (DNA) II alpha
chr11	98886201	98886507	-	98886204	98886507	A3SS	0.5	50	50	ENSMUST00000068031.8	ENSMUSG00000020914.18	Top2a	chr11	protein_coding	topoisomerase (DNA) II alpha
chr11	98939197	98942271	+	98939197;98940054	98939920;98942271	ES	0.5	50	50	ENSMUST00000017637.13	ENSMUSG00000017493.13	Igfbp4	chr11	protein_coding	insulin-like growth factor binding protein 4
chr11	98933328	98939052	+	98932671	98939052	A5SS	0.2	50	50	ENSMUST00000017637.13	ENSMUSG00000017493.13	Igfbp4	chr11	protein_coding	insulin-like growth factor binding protein 4
chr11	98934450	98939052	+	98932671	98939052	A5SS	0.2	50	50	ENSMUST00000017637.13	ENSMUSG00000017493.13	Igfbp4	chr11	protein_coding	insulin-like growth factor binding protein 4
chr11	98935738	98939052	+	98932671	98939052	A5SS	0.2	50	50	ENSMUST00000017637.13	ENSMUSG00000017493.13	Igfbp4	chr11	protein_coding	insulin-like growth factor binding protein 4
chr11	98938229	98939052	+	98932671	98939052	A5SS	0.2	50	50	ENSMUST00000017637.13	ENSMUSG00000017493.13	Igfbp4	chr11	protein_coding	insulin-like growth factor binding protein 4
chr11	98934450	98939052	+	98933328	98939052	A5SS	0.2	50	50	ENSMUST00000177105.2	ENSMUSG00000017493.13	Igfbp4	chr11	protein_coding	insulin-like growth factor binding protein 4
chr11	98935738	98939052	+	98933328	98939052	A5SS	0.2	50	50	ENSMUST00000177105.2	ENSMUSG00000017493.13	Igfbp4	chr11	protein_coding	insulin-like growth factor binding protein 4
chr11	98938229	98939052	+	98933328	98939052	A5SS	0.2	50	50	ENSMUST00000177105.2	ENSMUSG00000017493.13	Igfbp4	chr11	protein_coding	insulin-like growth factor binding protein 4
chr11	98935738	98939052	+	98934450	98939052	A5SS	0.2	50	50	ENSMUST00000130530.8	ENSMUSG00000017493.13	Igfbp4	chr11	protein_coding	insulin-like growth factor binding protein 4
chr11	98938229	98939052	+	98934450	98939052	A5SS	0.2	50	50	ENSMUST00000130530.8	ENSMUSG00000017493.13	Igfbp4	chr11	protein_coding	insulin-like growth factor binding protein 4
chr11	98938229	98939052	+	98935738	98939052	A5SS	0.2	50	50	ENSMUST00000123946.2	ENSMUSG00000017493.13	Igfbp4	chr11	protein_coding	insulin-like growth factor binding protein 4
chr11	99111561	99119101	-	99111561;99115968	99115864;99119101	ES	0.5	50	50	ENSMUST00000103133.4	ENSMUSG00000037935.17	Smarce1	chr11	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
chr11	99111561	99115547	-	99111561	99115864	A5SS	0.33	50	50	ENSMUST00000103133.4	ENSMUSG00000037935.17	Smarce1	chr11	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
chr11	99119374	99120999	-	99119374	99121228	A5SS	0.5	50	50	ENSMUST00000103133.4	ENSMUSG00000037935.17	Smarce1	chr11	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
chr11	99111561	99119101	-	99111561;99115968	99115547;99119101	ES	0.5	50	50	ENSMUST00000135040.8	ENSMUSG00000037935.17	Smarce1	chr11	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
chr11	99131447	99134688	-	99131447	99134769	A5SS	0.5	50	50	ENSMUST00000103132.10	ENSMUSG00000035849.15	Krt222	chr11	protein_coding	keratin 222
chr11	99276462	99276737	-	99276462	99276757	A5SS	0.5	50	50	ENSMUST00000103131.5	ENSMUSG00000019761.11	Krt10	chr11	protein_coding	keratin 10
chr11	99432567	99433538	-	99431060	99433538	A3SS	0.5	50	50	ENSMUST00000107443.8	ENSMUSG00000059169.10	Krt40	chr11	protein_coding	keratin 40
chr11	99431060	99432023	-	99431060	99433538	A5SS	0.5	50	50	ENSMUST00000107443.8	ENSMUSG00000059169.10	Krt40	chr11	protein_coding	keratin 40
chr11	99903542	99904434	-	99903542	99904917	A5SS	0.5	50	50	ENSMUST00000018399.3	ENSMUSG00000035592.3	Krt33a	chr11	protein_coding	keratin 33A
chr11	99975912	99977176	-	99975912	99976219	5pMXE	0.5	50	50	ENSMUST00000139873.2	ENSMUSG00000046095.6	Krt32	chr11	protein_coding	keratin 32
chr11	100010881	100011319	-	100010881	100011851	A5SS	0.5	50	50	ENSMUST00000007275.3	ENSMUSG00000044041.5	Krt13	chr11	protein_coding	keratin 13
chr11	100033334	100034492	-	100033334	100036257	A5SS	0.5	50	50	ENSMUST00000007317.8	ENSMUSG00000020911.15	Krt19	chr11	protein_coding	keratin 19
chr11	100096529	100097739	-	100096529	100096797	5pMXE	0.5	50	50	ENSMUST00000137265.2	ENSMUSG00000045545.9	Krt14	chr11	protein_coding	keratin 14
chr11	100211331	100211492	+	100210986	100211492	A5SS	0.5	50	50	ENSMUST00000049385.14	ENSMUSG00000035530.14	Eif1	chr11	protein_coding	eukaryotic translation initiation factor 1
chr11	100240427	100242036	-	100240445	100242036	A3SS	0.5	50	50	ENSMUST00000138603.9	ENSMUSG00000006930.16	Hap1	chr11	protein_coding	huntingtin-associated protein 1
chr11	100242351	100242669	-	100242378	100242669	A3SS	0.5	50	50	ENSMUST00000138603.9	ENSMUSG00000006930.16	Hap1	chr11	protein_coding	huntingtin-associated protein 1
chr11	100245574	100246137	-	100245574	100246516	A5SS	0.5	50	50	ENSMUST00000138603.9	ENSMUSG00000006930.16	Hap1	chr11	protein_coding	huntingtin-associated protein 1
chr11	100277214	100277322	-	100277214	100288462	A5SS	0.33	50	50	ENSMUST00000001592.15	ENSMUSG00000001552.15	Jup	chr11	protein_coding	junction plakoglobin
chr11	100277214	100277542	-	100277214	100288462	A5SS	0.33	50	50	ENSMUST00000001592.15	ENSMUSG00000001552.15	Jup	chr11	protein_coding	junction plakoglobin
chr11	100277214	100277322	-	100277214	100277542	A5SS	0.33	50	50	ENSMUST00000128268.8	ENSMUSG00000001552.15	Jup	chr11	protein_coding	junction plakoglobin
chr11	100302023	100302618	-	100302023	100302555	A5SS	0.5	50	50	ENSMUST00000066489.13	ENSMUSG00000006931.16	P3h4	chr11	protein_coding	prolyl 3-hydroxylase family member 4 (non-enzymatic)
chr11	100306851	100311717	+	100306851;100311371	100311226;100311717	ES	0.5	50	50	ENSMUST00000001595.10	ENSMUSG00000001555.11	Fkbp10	chr11	protein_coding	FK506 binding protein 10
chr11	100311906	100312020	+	100311906	100312770	A3SS	0.5	50	50	ENSMUST00000107400.3	ENSMUSG00000001555.11	Fkbp10	chr11	protein_coding	FK506 binding protein 10
chr11	100312659	100312770	+	100311906	100312770	A5SS	0.5	50	50	ENSMUST00000107400.3	ENSMUSG00000001555.11	Fkbp10	chr11	protein_coding	FK506 binding protein 10
chr11	100306851	100311717	+	100311371	100311717	5pMXE	0.5	50	50	ENSMUST00000139084.2	ENSMUSG00000001555.11	Fkbp10	chr11	protein_coding	FK506 binding protein 10
chr11	100327066	100331011	-	100327066;100330912	100330866;100331011	ES	0.5	50	50	ENSMUST00000107399.9	ENSMUSG00000017176.18	Nt5c3b	chr11	protein_coding	5'-nucleotidase, cytosolic IIIB
chr11	100331080	100331870	-	100331080;100331753	100331655;100331870	ES	0.5	50	50	ENSMUST00000107399.9	ENSMUSG00000017176.18	Nt5c3b	chr11	protein_coding	5'-nucleotidase, cytosolic IIIB
chr11	100320775	100321903	-	100313771	100321903	A3SS	0.5	50	50	ENSMUST00000107399.9	ENSMUSG00000017176.18	Nt5c3b	chr11	protein_coding	5'-nucleotidase, cytosolic IIIB
chr11	100324753	100325521	-	100323906	100325521	A3SS	0.5	50	50	ENSMUST00000107399.9	ENSMUSG00000017176.18	Nt5c3b	chr11	protein_coding	5'-nucleotidase, cytosolic IIIB
chr11	100329369	100330866	-	100327066	100330866	A3SS	0.33	50	50	ENSMUST00000107399.9	ENSMUSG00000017176.18	Nt5c3b	chr11	protein_coding	5'-nucleotidase, cytosolic IIIB
chr11	100330760	100330866	-	100327066	100330866	A3SS	0.33	50	50	ENSMUST00000107399.9	ENSMUSG00000017176.18	Nt5c3b	chr11	protein_coding	5'-nucleotidase, cytosolic IIIB
chr11	100331080	100331870	-	100331080	100331754	5pMXE	0.33	50	50	ENSMUST00000092689.9	ENSMUSG00000017176.18	Nt5c3b	chr11	protein_coding	5'-nucleotidase, cytosolic IIIB
chr11	100331080	100331655	-	100331080	100331754	A5SS	0.33	50	50	ENSMUST00000092689.9	ENSMUSG00000017176.18	Nt5c3b	chr11	protein_coding	5'-nucleotidase, cytosolic IIIB
chr11	100331080	100331870	-	100331080	100331655	5pMXE	0.33	50	50	ENSMUST00000107397.2	ENSMUSG00000017176.18	Nt5c3b	chr11	protein_coding	5'-nucleotidase, cytosolic IIIB
chr11	100330760	100330866	-	100329369	100330866	A3SS	0.33	50	50	ENSMUST00000155025.8	ENSMUSG00000017176.18	Nt5c3b	chr11	protein_coding	5'-nucleotidase, cytosolic IIIB
chr11	100389588	100395029	-	100389588;100394015	100393986;100395029	ES	0.5	50	50	ENSMUST00000107389.8	ENSMUSG00000020917.18	Acly	chr11	protein_coding	ATP citrate lyase
chr11	100391588	100393986	-	100389588	100393986	A3SS	0.5	50	50	ENSMUST00000107389.8	ENSMUSG00000020917.18	Acly	chr11	protein_coding	ATP citrate lyase
chr11	100457835	100462266	+	100457835;100460766	100460682;100462266	ES	0.5	50	50	ENSMUST00000092684.12	ENSMUSG00000006784.15	Odad4	chr11	protein_coding	outer dynein arm complex subunit 4
chr11	100469878	100482093	+	100469878	100471173	3pMXE	0.5	50	50	ENSMUST00000103120.5	ENSMUSG00000006782.17	Cnp	chr11	protein_coding	2',3'-cyclic nucleotide 3' phosphodiesterase
chr11	100466044	100467062	+	100465894	100467062	A5SS	0.5	50	50	ENSMUST00000103120.5	ENSMUSG00000006782.17	Cnp	chr11	protein_coding	2',3'-cyclic nucleotide 3' phosphodiesterase
chr11	100490135	100510354	-	100490135;100492642	100492554;100510354	ES	0.5	50	50	ENSMUST00000239499.2	ENSMUSG00000014195.17	Dnajc7	chr11	protein_coding	DnaJ heat shock protein family (Hsp40) member C7
chr11	100492642	100510852	-	100492642	100510354	5pMXE	0.33	50	50	ENSMUST00000239499.2	ENSMUSG00000014195.17	Dnajc7	chr11	protein_coding	DnaJ heat shock protein family (Hsp40) member C7
chr11	100475881;100480604	100480501;100480724	-	100475881	100480724	cassetteExon	0.5	100	100	ENSMUST00000239499.2	ENSMUSG00000014195.17	Dnajc7	chr11	protein_coding	DnaJ heat shock protein family (Hsp40) member C7
chr11	100475881;100480604	100480505;100480724	-	100475881	100480724	cassetteExon	0.5	100	100	ENSMUST00000239499.2	ENSMUSG00000014195.17	Dnajc7	chr11	protein_coding	DnaJ heat shock protein family (Hsp40) member C7
chr11	100483799;100486828	100486787;100486992	-	100483799	100486992	cassetteExon	0.5	100	100	ENSMUST00000239499.2	ENSMUSG00000014195.17	Dnajc7	chr11	protein_coding	DnaJ heat shock protein family (Hsp40) member C7
chr11	100488880	100489441	-	100487066	100489441	A3SS	0.5	50	50	ENSMUST00000239499.2	ENSMUSG00000014195.17	Dnajc7	chr11	protein_coding	DnaJ heat shock protein family (Hsp40) member C7
chr11	100483799	100485098	-	100483799	100486992	A5SS	0.2	50	50	ENSMUST00000239499.2	ENSMUSG00000014195.17	Dnajc7	chr11	protein_coding	DnaJ heat shock protein family (Hsp40) member C7
chr11	100483799	100485450	-	100483799	100486992	A5SS	0.2	50	50	ENSMUST00000239499.2	ENSMUSG00000014195.17	Dnajc7	chr11	protein_coding	DnaJ heat shock protein family (Hsp40) member C7
chr11	100483799	100485586	-	100483799	100486992	A5SS	0.2	50	50	ENSMUST00000239499.2	ENSMUSG00000014195.17	Dnajc7	chr11	protein_coding	DnaJ heat shock protein family (Hsp40) member C7
chr11	100487066	100490011	-	100487066	100489441	A5SS&ES	0.5	50	50	ENSMUST00000239499.2	ENSMUSG00000014195.17	Dnajc7	chr11	protein_coding	DnaJ heat shock protein family (Hsp40) member C7
chr11	100489554	100490011	-	100489554	100490033	A5SS	0.5	50	50	ENSMUST00000239499.2	ENSMUSG00000014195.17	Dnajc7	chr11	protein_coding	DnaJ heat shock protein family (Hsp40) member C7
chr11	100492642	100504018	-	100492642	100510354	A5SS	0.33	50	50	ENSMUST00000239499.2	ENSMUSG00000014195.17	Dnajc7	chr11	protein_coding	DnaJ heat shock protein family (Hsp40) member C7
chr11	100487066	100490011	-	100487066;100489554	100489441;100490011	ES	0.5	50	50	ENSMUST00000014339.15	ENSMUSG00000014195.17	Dnajc7	chr11	protein_coding	DnaJ heat shock protein family (Hsp40) member C7
chr11	100475881	100480505	-	100475881	100480501	A5SS	0.33	50	50	ENSMUST00000239494.2	ENSMUSG00000014195.17	Dnajc7	chr11	protein_coding	DnaJ heat shock protein family (Hsp40) member C7
chr11	100483799	100486787	-	100483799	100485586	5pMXE	0.2	50	50	ENSMUST00000239453.2	ENSMUSG00000014195.17	Dnajc7	chr11	protein_coding	DnaJ heat shock protein family (Hsp40) member C7
chr11	100483799	100485098	-	100483799	100485586	A5SS	0.2	50	50	ENSMUST00000239453.2	ENSMUSG00000014195.17	Dnajc7	chr11	protein_coding	DnaJ heat shock protein family (Hsp40) member C7
chr11	100483799	100485450	-	100483799	100485586	A5SS	0.2	50	50	ENSMUST00000239453.2	ENSMUSG00000014195.17	Dnajc7	chr11	protein_coding	DnaJ heat shock protein family (Hsp40) member C7
chr11	100492642	100510852	-	100492642	100504018	5pMXE	0.33	50	50	ENSMUST00000146840.3	ENSMUSG00000014195.17	Dnajc7	chr11	protein_coding	DnaJ heat shock protein family (Hsp40) member C7
chr11	100483799	100486787	-	100483799	100485450	5pMXE	0.2	50	50	ENSMUST00000239426.2	ENSMUSG00000014195.17	Dnajc7	chr11	protein_coding	DnaJ heat shock protein family (Hsp40) member C7
chr11	100483799	100485098	-	100483799	100485450	A5SS	0.2	50	50	ENSMUST00000239426.2	ENSMUSG00000014195.17	Dnajc7	chr11	protein_coding	DnaJ heat shock protein family (Hsp40) member C7
chr11	100483799	100486787	-	100483799	100485098	5pMXE	0.2	50	50	ENSMUST00000239482.2	ENSMUSG00000014195.17	Dnajc7	chr11	protein_coding	DnaJ heat shock protein family (Hsp40) member C7
chr11	100490135;100510638	100510354;100510852	-	100490135;100492642	100492554;100510852	MXE	0.5	100	100	ENSMUST00000239490.2	ENSMUSG00000014195.17	Dnajc7	chr11	protein_coding	DnaJ heat shock protein family (Hsp40) member C7
chr11	100492642;100510638	100510354;100510852	-	100492642	100510852	cassetteExon	0.5	100	100	ENSMUST00000239490.2	ENSMUSG00000014195.17	Dnajc7	chr11	protein_coding	DnaJ heat shock protein family (Hsp40) member C7
chr11	100487066	100490011	-	100489554	100490011	3pMXE	0.5	50	50	ENSMUST00000132886.3	ENSMUSG00000014195.17	Dnajc7	chr11	protein_coding	DnaJ heat shock protein family (Hsp40) member C7
chr11	100511167	100515018	+	100510640	100515018	A5SS	0.2	50	50	ENSMUST00000107376.8	ENSMUSG00000017837.13	Nkiras2	chr11	protein_coding	NFKB inhibitor interacting Ras-like protein 2
chr11	100513834	100515018	+	100510640	100515018	A5SS	0.2	50	50	ENSMUST00000107376.8	ENSMUSG00000017837.13	Nkiras2	chr11	protein_coding	NFKB inhibitor interacting Ras-like protein 2
chr11	100514033	100515018	+	100510640	100515018	A5SS	0.2	50	50	ENSMUST00000107376.8	ENSMUSG00000017837.13	Nkiras2	chr11	protein_coding	NFKB inhibitor interacting Ras-like protein 2
chr11	100514766	100515018	+	100510640	100515018	A5SS	0.2	50	50	ENSMUST00000107376.8	ENSMUSG00000017837.13	Nkiras2	chr11	protein_coding	NFKB inhibitor interacting Ras-like protein 2
chr11	100513834	100515018	+	100511167	100515018	A5SS	0.2	50	50	ENSMUST00000051947.10	ENSMUSG00000017837.13	Nkiras2	chr11	protein_coding	NFKB inhibitor interacting Ras-like protein 2
chr11	100514033	100515018	+	100511167	100515018	A5SS	0.2	50	50	ENSMUST00000051947.10	ENSMUSG00000017837.13	Nkiras2	chr11	protein_coding	NFKB inhibitor interacting Ras-like protein 2
chr11	100514766	100515018	+	100511167	100515018	A5SS	0.2	50	50	ENSMUST00000051947.10	ENSMUSG00000017837.13	Nkiras2	chr11	protein_coding	NFKB inhibitor interacting Ras-like protein 2
chr11	100513834;100514766	100514691;100515018	+	100513834	100515018	cassetteExon	0.5	100	100	ENSMUST00000017981.10	ENSMUSG00000017837.13	Nkiras2	chr11	protein_coding	NFKB inhibitor interacting Ras-like protein 2
chr11	100514033	100515018	+	100513834	100515018	A5SS	0.2	50	50	ENSMUST00000017981.10	ENSMUSG00000017837.13	Nkiras2	chr11	protein_coding	NFKB inhibitor interacting Ras-like protein 2
chr11	100514033	100515018	+	100514766	100515018	A5SS&ES	0.33	50	50	ENSMUST00000155840.2	ENSMUSG00000017837.13	Nkiras2	chr11	protein_coding	NFKB inhibitor interacting Ras-like protein 2
chr11	100528715	100548201	-	100528715	100541323	5pMXE	0.5	50	50	ENSMUST00000103119.10	ENSMUSG00000014198.16	Zfp385c	chr11	protein_coding	zinc finger protein 385C
chr11	100528718	100548201	-	100528718	100542486	5pMXE	0.5	50	50	ENSMUST00000148560.2	ENSMUSG00000014198.16	Zfp385c	chr11	protein_coding	zinc finger protein 385C
chr11	100528718	100548201	-	100528715	100548201	A3SS	0.5	50	50	ENSMUST00000151589.2	ENSMUSG00000014198.16	Zfp385c	chr11	protein_coding	zinc finger protein 385C
chr11	100587037	100588982	-	100587037;100587992	100587802;100588982	ES	0.5	50	50	ENSMUST00000017974.13	ENSMUSG00000017830.16	Dhx58	chr11	protein_coding	DEXH (Asp-Glu-X-His) box polypeptide 58
chr11	100594521	100594997	-	100594521;100594895	100594727;100594997	ES	0.5	50	50	ENSMUST00000017974.13	ENSMUSG00000017830.16	Dhx58	chr11	protein_coding	DEXH (Asp-Glu-X-His) box polypeptide 58
chr11	100599811	100599902	-	100599808	100599902	A3SS	0.5	50	50	ENSMUST00000153526.8	ENSMUSG00000020918.15	Kat2a	chr11	protein_coding	K(lysine) acetyltransferase 2A
chr11	100600315	100601271	-	100600315	100601076	A5SS	0.5	50	50	ENSMUST00000153526.8	ENSMUSG00000020918.15	Kat2a	chr11	protein_coding	K(lysine) acetyltransferase 2A
chr11	100610994;100612476	100612327;100628904	-	100610994	100628904	cassetteExon	0.5	100	100	ENSMUST00000107364.8	ENSMUSG00000019173.12	Rab5c	chr11	protein_coding	RAB5C, member RAS oncogene family
chr11	100607731	100608668	-	100607677	100608668	A3SS	0.5	50	50	ENSMUST00000107364.8	ENSMUSG00000019173.12	Rab5c	chr11	protein_coding	RAB5C, member RAS oncogene family
chr11	100610994	100620967	-	100610994	100628904	A5SS	0.33	50	50	ENSMUST00000107364.8	ENSMUSG00000019173.12	Rab5c	chr11	protein_coding	RAB5C, member RAS oncogene family
chr11	100610994	100612327	-	100610994	100620967	A5SS	0.33	50	50	ENSMUST00000155843.2	ENSMUSG00000019173.12	Rab5c	chr11	protein_coding	RAB5C, member RAS oncogene family
chr11	100631447	100632115	-	100631447	100632119	A5SS	0.5	50	50	ENSMUST00000107361.9	ENSMUSG00000035355.16	Kcnh4	chr11	protein_coding	potassium voltage-gated channel, subfamily H (eag-related), member 4
chr11	100661176	100661681	-	100661176	100661705	A5SS	0.5	50	50	ENSMUST00000017891.14	ENSMUSG00000017747.14	Ghdc	chr11	protein_coding	GH3 domain containing
chr11	100699359	100741225	-	100699359	100712878	5pMXE	0.5	50	50	ENSMUST00000107358.9	ENSMUSG00000020919.12	Stat5b	chr11	protein_coding	signal transducer and activator of transcription 5B
chr11	100695824	100699222	-	100695852	100699222	A3SS	0.5	50	50	ENSMUST00000107358.9	ENSMUSG00000020919.12	Stat5b	chr11	protein_coding	signal transducer and activator of transcription 5B
chr11	100750406	100752154	+	100750406;100751402	100751310;100752154	ES	0.5	50	50	ENSMUST00000004145.14	ENSMUSG00000004043.15	Stat5a	chr11	protein_coding	signal transducer and activator of transcription 5A
chr11	100772011	100772888	+	100772011;100772615	100772564;100772888	ES	0.5	50	50	ENSMUST00000004145.14	ENSMUSG00000004043.15	Stat5a	chr11	protein_coding	signal transducer and activator of transcription 5A
chr11	100750561	100751310	+	100750406	100751310	A5SS	0.5	50	50	ENSMUST00000004145.14	ENSMUSG00000004043.15	Stat5a	chr11	protein_coding	signal transducer and activator of transcription 5A
chr11	100750406	100752154	+	100751402	100752154	5pMXE	0.5	50	50	ENSMUST00000138083.8	ENSMUSG00000004043.15	Stat5a	chr11	protein_coding	signal transducer and activator of transcription 5A
chr11	100780416	100780712	-	100780366	100780712	A3SS	0.5	50	50	ENSMUST00000103114.8	ENSMUSG00000004040.17	Stat3	chr11	protein_coding	signal transducer and activator of transcription 3
chr11	100798837	100799486	-	100798915	100799486	A3SS	0.5	50	50	ENSMUST00000103114.8	ENSMUSG00000004040.17	Stat3	chr11	protein_coding	signal transducer and activator of transcription 3
chr11	100780754	100783903	-	100780754	100783900	A5SS	0.5	50	50	ENSMUST00000103114.8	ENSMUSG00000004040.17	Stat3	chr11	protein_coding	signal transducer and activator of transcription 3
chr11	100789649	100790042	-	100789649	100793563	A5SS	0.5	50	50	ENSMUST00000103114.8	ENSMUSG00000004040.17	Stat3	chr11	protein_coding	signal transducer and activator of transcription 3
chr11	100855328	100860816	-	100850151	100860816	A3SS	0.5	50	50	ENSMUST00000060792.6	ENSMUSG00000004044.10	Cavin1	chr11	protein_coding	caveolae associated 1
chr11	100901552	100902583	+	100900390	100902583	A5SS	0.5	50	50	ENSMUST00000151554.2	ENSMUSG00000019302.17	Atp6v0a1	chr11	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit A1
chr11	100912008	100917486	+	100912008	100917507	A3SS	0.5	50	50	ENSMUST00000154896.8	ENSMUSG00000019302.17	Atp6v0a1	chr11	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit A1
chr11	100934833	100935342	+	100934833	100935346	A3SS	0.5	50	50	ENSMUST00000154896.8	ENSMUSG00000019302.17	Atp6v0a1	chr11	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit A1
chr11	100939351;100940302	100939832;100945852	+	100939351	100945852	cassetteExon	0.5	100	100	ENSMUST00000103110.10	ENSMUSG00000019302.17	Atp6v0a1	chr11	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit A1
chr11	100939351;100940302	100940285;100945852	+	100939351	100945852	cassetteExon	0.5	100	100	ENSMUST00000103110.10	ENSMUSG00000019302.17	Atp6v0a1	chr11	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit A1
chr11	100939351;100945674	100945657;100945852	+	100939351	100945852	cassetteExon	0.5	100	100	ENSMUST00000103110.10	ENSMUSG00000019302.17	Atp6v0a1	chr11	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit A1
chr11	100939351;100945674	100945657;100945852	+	100939351;100940302	100940285;100945852	MXE	0.5	100	100	ENSMUST00000044721.13	ENSMUSG00000019302.17	Atp6v0a1	chr11	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit A1
chr11	100939351	100939832	+	100939351	100940285	A3SS	0.25	50	50	ENSMUST00000044721.13	ENSMUSG00000019302.17	Atp6v0a1	chr11	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit A1
chr11	100939351;100940302	100939832;100945852	+	100939351;100945674	100945657;100945852	MXE	0.5	100	100	ENSMUST00000168757.9	ENSMUSG00000019302.17	Atp6v0a1	chr11	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit A1
chr11	100939351	100945657	+	100939351	100939832	3pMXE	0.25	50	50	ENSMUST00000139857.2	ENSMUSG00000019302.17	Atp6v0a1	chr11	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit A1
chr11	100939351	100945852	+	100939351	100939832	3pMXE	0.25	50	50	ENSMUST00000139857.2	ENSMUSG00000019302.17	Atp6v0a1	chr11	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit A1
chr11	100962868	100964759	+	100962868	100963043	A3SS&ES	0.5	50	50	ENSMUST00000001802.10	ENSMUSG00000001751.10	Naglu	chr11	protein_coding	alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)
chr11	100962475	100962722	+	100962053	100962722	A5SS	0.5	50	50	ENSMUST00000001802.10	ENSMUSG00000001751.10	Naglu	chr11	protein_coding	alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)
chr11	100973516	100975142	+	100973516;100974532	100973825;100975142	ES	0.5	50	50	ENSMUST00000001806.10	ENSMUSG00000001755.13	Coasy	chr11	protein_coding	Coenzyme A synthase
chr11	100973516	100973825	+	100973516	100975142	A3SS	0.5	50	50	ENSMUST00000151056.8	ENSMUSG00000001755.13	Coasy	chr11	protein_coding	Coenzyme A synthase
chr11	100974532	100975142	+	100973516	100975142	A5SS	0.5	50	50	ENSMUST00000151056.8	ENSMUSG00000001755.13	Coasy	chr11	protein_coding	Coenzyme A synthase
chr11	100978616	100979424	+	100978616;100979151	100979062;100979424	ES	0.5	50	50	ENSMUST00000107302.8	ENSMUSG00000017801.16	Mlx	chr11	protein_coding	MAX-like protein X
chr11	100978616	100979419	+	100978616	100979062	A3SS&ES	0.33	50	50	ENSMUST00000107302.8	ENSMUSG00000017801.16	Mlx	chr11	protein_coding	MAX-like protein X
chr11	100978140	100978580	+	100978193	100978580	A5SS	0.33	50	50	ENSMUST00000107302.8	ENSMUSG00000017801.16	Mlx	chr11	protein_coding	MAX-like protein X
chr11	100978355	100978580	+	100978193	100978580	A5SS	0.33	50	50	ENSMUST00000107302.8	ENSMUSG00000017801.16	Mlx	chr11	protein_coding	MAX-like protein X
chr11	100978616	100979419	+	100978616	100979424	A3SS	0.33	50	50	ENSMUST00000107303.10	ENSMUSG00000017801.16	Mlx	chr11	protein_coding	MAX-like protein X
chr11	100978355	100978580	+	100978140	100978580	A5SS	0.33	50	50	ENSMUST00000149411.8	ENSMUSG00000017801.16	Mlx	chr11	protein_coding	MAX-like protein X
chr11	100984640	100985762	-	100984618	100985762	A3SS	0.5	50	50	ENSMUST00000019447.15	ENSMUSG00000019303.15	Psmc3ip	chr11	protein_coding	proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein
chr11	100989446	100990499	-	100989446;100989966	100989834;100990499	ES	0.5	50	50	ENSMUST00000107295.10	ENSMUSG00000017802.15	Retreg3	chr11	protein_coding	reticulophagy regulator family member 3
chr11	100990581;100991032	100990915;100991748	-	100990581	100991748	cassetteExon	0.5	100	100	ENSMUST00000107295.10	ENSMUSG00000017802.15	Retreg3	chr11	protein_coding	reticulophagy regulator family member 3
chr11	100992916;100993835	100993709;100994716	-	100992916	100994716	cassetteExon	0.5	100	100	ENSMUST00000107295.10	ENSMUSG00000017802.15	Retreg3	chr11	protein_coding	reticulophagy regulator family member 3
chr11	100997239;101008126	101008012;101010367	-	100997239	101010367	cassetteExon	0.5	100	100	ENSMUST00000107295.10	ENSMUSG00000017802.15	Retreg3	chr11	protein_coding	reticulophagy regulator family member 3
chr11	101054523	101054839	-	101054523	101054864	A5SS	0.5	50	50	ENSMUST00000139200.8	ENSMUSG00000035172.16	Plekhh3	chr11	protein_coding	pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
chr11	101055617	101055877	-	101055617	101055886	A5SS	0.5	50	50	ENSMUST00000139200.8	ENSMUSG00000035172.16	Plekhh3	chr11	protein_coding	pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
chr11	101059523	101060979	-	101059523	101061551	A5SS	0.5	50	50	ENSMUST00000129895.8	ENSMUSG00000035172.16	Plekhh3	chr11	protein_coding	pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
chr11	101068442	101068825	+	101061783	101068825	A5SS	0.5	50	50	ENSMUST00000138942.2	ENSMUSG00000017167.7	Cntnap1	chr11	protein_coding	contactin associated protein-like 1
chr11	101084632	101085712	-	101084632;101085375	101085294;101085712	ES	0.5	50	50	ENSMUST00000107284.8	ENSMUSG00000006920.15	Ezh1	chr11	protein_coding	enhancer of zeste 1 polycomb repressive complex 2 subunit
chr11	101098255	101100206	-	101098255;101099111	101098948;101100206	ES	0.5	50	50	ENSMUST00000107284.8	ENSMUSG00000006920.15	Ezh1	chr11	protein_coding	enhancer of zeste 1 polycomb repressive complex 2 subunit
chr11	101108194	101109480	-	101108189	101109480	A3SS	0.5	50	50	ENSMUST00000107284.8	ENSMUSG00000006920.15	Ezh1	chr11	protein_coding	enhancer of zeste 1 polycomb repressive complex 2 subunit
chr11	101098255	101100206	-	101099111	101100206	3pMXE	0.5	50	50	ENSMUST00000154211.2	ENSMUSG00000006920.15	Ezh1	chr11	protein_coding	enhancer of zeste 1 polycomb repressive complex 2 subunit
chr11	101137970	101138229	+	101137970	101138412	A3SS	0.33	50	50	ENSMUST00000129680.8	ENSMUSG00000001240.14	Ramp2	chr11	protein_coding	receptor (calcitonin) activity modifying protein 2
chr11	101137970	101138397	+	101137970	101138412	A3SS	0.33	50	50	ENSMUST00000129680.8	ENSMUSG00000001240.14	Ramp2	chr11	protein_coding	receptor (calcitonin) activity modifying protein 2
chr11	101137630	101137881	+	101137398	101137881	A5SS	0.5	50	50	ENSMUST00000129680.8	ENSMUSG00000001240.14	Ramp2	chr11	protein_coding	receptor (calcitonin) activity modifying protein 2
chr11	101145822	101147704	+	101145822;101146923	101146835;101147704	ES	0.5	50	50	ENSMUST00000128260.9	ENSMUSG00000001240.14	Ramp2	chr11	protein_coding	receptor (calcitonin) activity modifying protein 2
chr11	101137970	101138229	+	101137970	101144430	A3SS	0.25	50	50	ENSMUST00000128260.9	ENSMUSG00000001240.14	Ramp2	chr11	protein_coding	receptor (calcitonin) activity modifying protein 2
chr11	101137970	101138397	+	101137970	101144430	A3SS	0.25	50	50	ENSMUST00000128260.9	ENSMUSG00000001240.14	Ramp2	chr11	protein_coding	receptor (calcitonin) activity modifying protein 2
chr11	101137970	101138412	+	101137970	101144430	A3SS	0.25	50	50	ENSMUST00000128260.9	ENSMUSG00000001240.14	Ramp2	chr11	protein_coding	receptor (calcitonin) activity modifying protein 2
chr11	101145002	101145745	+	101145002	101145769	A3SS	0.5	50	50	ENSMUST00000128260.9	ENSMUSG00000001240.14	Ramp2	chr11	protein_coding	receptor (calcitonin) activity modifying protein 2
chr11	101147779	101148727	+	101147779	101149736	A3SS	0.33	50	50	ENSMUST00000128260.9	ENSMUSG00000001240.14	Ramp2	chr11	protein_coding	receptor (calcitonin) activity modifying protein 2
chr11	101147779	101149596	+	101147779	101149736	A3SS	0.33	50	50	ENSMUST00000128260.9	ENSMUSG00000001240.14	Ramp2	chr11	protein_coding	receptor (calcitonin) activity modifying protein 2
chr11	101137970	101138397	+	101137970	101138229	A3SS	0.33	50	50	ENSMUST00000149585.8	ENSMUSG00000001240.14	Ramp2	chr11	protein_coding	receptor (calcitonin) activity modifying protein 2
chr11	101147779	101149596	+	101147779	101148727	3pMXE	0.33	50	50	ENSMUST00000007533.15	ENSMUSG00000078656.12	Vps25	chr11	protein_coding	vacuolar protein sorting 25
chr11	101155251	101156073	+	101155251;101155994	101155906;101156073	ES	0.5	50	50	ENSMUST00000139487.8	ENSMUSG00000035112.18	Wnk4	chr11	protein_coding	WNK lysine deficient protein kinase 4
chr11	101159316	101159888	+	101159316;101159650	101159529;101159888	ES	0.5	50	50	ENSMUST00000139487.8	ENSMUSG00000035112.18	Wnk4	chr11	protein_coding	WNK lysine deficient protein kinase 4
chr11	101165695	101165801	+	101165695	101166808	A3SS	0.5	50	50	ENSMUST00000139487.8	ENSMUSG00000035112.18	Wnk4	chr11	protein_coding	WNK lysine deficient protein kinase 4
chr11	101153721	101154595	+	101153671	101154595	A5SS	0.5	50	50	ENSMUST00000139487.8	ENSMUSG00000035112.18	Wnk4	chr11	protein_coding	WNK lysine deficient protein kinase 4
chr11	101166516	101166808	+	101165695	101166808	A5SS	0.5	50	50	ENSMUST00000139487.8	ENSMUSG00000035112.18	Wnk4	chr11	protein_coding	WNK lysine deficient protein kinase 4
chr11	101167709	101167859	+	101167751	101167859	A5SS	0.5	50	50	ENSMUST00000139487.8	ENSMUSG00000035112.18	Wnk4	chr11	protein_coding	WNK lysine deficient protein kinase 4
chr11	101169224	101169540	-	101169278	101169540	A3SS	0.5	50	50	ENSMUST00000017332.4	ENSMUSG00000017188.4	Coa3	chr11	protein_coding	cytochrome C oxidase assembly factor 3
chr11	101176635	101177680	+	101176635	101177187	3pMXE	0.5	50	50	ENSMUST00000128735.2	ENSMUSG00000078653.5	Cntd1	chr11	protein_coding	cyclin N-terminal domain containing 1
chr11	101170306	101174218	+	101169900	101174218	A5SS	0.5	50	50	ENSMUST00000128735.2	ENSMUSG00000078653.5	Cntd1	chr11	protein_coding	cyclin N-terminal domain containing 1
chr11	101177776	101182654	+	101177776	101178231	3pMXE	0.5	50	50	ENSMUST00000103107.5	ENSMUSG00000078653.5	Cntd1	chr11	protein_coding	cyclin N-terminal domain containing 1
chr11	101176635;101177529	101177187;101177680	+	101176635	101177680	cassetteExon	0.5	100	100	ENSMUST00000103107.5	ENSMUSG00000078653.5	Cntd1	chr11	protein_coding	cyclin N-terminal domain containing 1
chr11	101176635	101177680	+	101177529	101177680	5pMXE	0.5	50	50	ENSMUST00000153438.2	ENSMUSG00000078653.5	Cntd1	chr11	protein_coding	cyclin N-terminal domain containing 1
chr11	101179807	101181265	-	101179807;101180751	101180609;101181265	ES	0.5	50	50	ENSMUST00000130916.8	ENSMUSG00000035086.14	Becn1	chr11	protein_coding	beclin 1, autophagy related
chr11	101180751	101182209	-	101180751;101181325	101181265;101182209	ES	0.5	50	50	ENSMUST00000130916.8	ENSMUSG00000035086.14	Becn1	chr11	protein_coding	beclin 1, autophagy related
chr11	101187142	101192554	-	101187142;101189902	101189835;101192554	ES	0.5	50	50	ENSMUST00000130916.8	ENSMUSG00000035086.14	Becn1	chr11	protein_coding	beclin 1, autophagy related
chr11	101189044	101189835	-	101187142	101189835	A3SS	0.5	50	50	ENSMUST00000130916.8	ENSMUSG00000035086.14	Becn1	chr11	protein_coding	beclin 1, autophagy related
chr11	101182358	101183282	-	101182358	101184827	A5SS	0.5	50	50	ENSMUST00000130916.8	ENSMUSG00000035086.14	Becn1	chr11	protein_coding	beclin 1, autophagy related
chr11	101184973	101185792	-	101184973	101185796	A5SS	0.5	50	50	ENSMUST00000130916.8	ENSMUSG00000035086.14	Becn1	chr11	protein_coding	beclin 1, autophagy related
chr11	101186450	101187020	-	101186450	101187084	A5SS	0.5	50	50	ENSMUST00000130916.8	ENSMUSG00000035086.14	Becn1	chr11	protein_coding	beclin 1, autophagy related
chr11	101185990	101187084	-	101185990	101186121	A5SS&ES	0.5	50	50	ENSMUST00000139997.9	ENSMUSG00000035086.14	Becn1	chr11	protein_coding	beclin 1, autophagy related
chr11	101179807;101180751	101180609;101182209	-	101179807;101181325	101181265;101182209	MXE	0.5	100	100	ENSMUST00000172233.8	ENSMUSG00000035086.14	Becn1	chr11	protein_coding	beclin 1, autophagy related
chr11	101185990;101186450	101186121;101187084	-	101185990	101187084	cassetteExon	0.5	100	100	ENSMUST00000172233.8	ENSMUSG00000035086.14	Becn1	chr11	protein_coding	beclin 1, autophagy related
chr11	101180751	101182209	-	101181325	101182209	A3SS	0.5	50	50	ENSMUST00000136535.8	ENSMUSG00000035086.14	Becn1	chr11	protein_coding	beclin 1, autophagy related
chr11	101179807	101181265	-	101179807	101180609	A5SS	0.5	50	50	ENSMUST00000136535.8	ENSMUSG00000035086.14	Becn1	chr11	protein_coding	beclin 1, autophagy related
chr11	101187142	101192554	-	101189902	101192554	A3SS&ES	0.5	50	50	ENSMUST00000129863.2	ENSMUSG00000035086.14	Becn1	chr11	protein_coding	beclin 1, autophagy related
chr11	101185990	101187084	-	101186450	101187084	3pMXE	0.5	50	50	ENSMUST00000140706.8	ENSMUSG00000035086.14	Becn1	chr11	protein_coding	beclin 1, autophagy related
chr11	101207314	101208007	+	101207314;101207921	101207847;101208007	ES	0.5	50	50	ENSMUST00000142640.8	ENSMUSG00000078652.10	Psme3	chr11	protein_coding	proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)
chr11	101210418	101210738	+	101210330	101210738	A5SS	0.5	50	50	ENSMUST00000142640.8	ENSMUSG00000078652.10	Psme3	chr11	protein_coding	proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)
chr11	101207314	101208007	+	101207921	101208007	5pMXE	0.5	50	50	ENSMUST00000151385.2	ENSMUSG00000078652.10	Psme3	chr11	protein_coding	proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)
chr11	101219374	101219648	+	101219455	101219648	A5SS	0.5	50	50	ENSMUST00000041095.14	ENSMUSG00000078651.9	Aoc2	chr11	protein_coding	amine oxidase, copper containing 2 (retina-specific)
chr11	101222654	101226543	+	101223365	101226543	A5SS	0.5	50	50	ENSMUST00000103105.10	ENSMUSG00000019326.15	Aoc3	chr11	protein_coding	amine oxidase, copper containing 3
chr11	101315094	101315442	-	101315094	101315297	5pMXE	0.5	50	50	ENSMUST00000107257.8	ENSMUSG00000097239.8	Gm27029	chr11	protein_coding	predicted gene, 27029
chr11	101302050	101302120	-	101302025	101302120	A3SS	0.5	50	50	ENSMUST00000107257.8	ENSMUSG00000097239.8	Gm27029	chr11	protein_coding	predicted gene, 27029
chr11	101310012	101310501	-	101308060	101310501	A3SS	0.5	50	50	ENSMUST00000107257.8	ENSMUSG00000097239.8	Gm27029	chr11	protein_coding	predicted gene, 27029
chr11	101310012	101312691	-	101310554	101312691	A3SS&ES	0.25	50	50	ENSMUST00000107257.8	ENSMUSG00000097239.8	Gm27029	chr11	protein_coding	predicted gene, 27029
chr11	101312020	101312691	-	101310554	101312691	A3SS	0.25	50	50	ENSMUST00000107257.8	ENSMUSG00000097239.8	Gm27029	chr11	protein_coding	predicted gene, 27029
chr11	101312477	101312691	-	101310554	101312691	A3SS	0.25	50	50	ENSMUST00000107257.8	ENSMUSG00000097239.8	Gm27029	chr11	protein_coding	predicted gene, 27029
chr11	101308060	101308166	-	101308060	101310501	A5SS	0.33	50	50	ENSMUST00000107257.8	ENSMUSG00000097239.8	Gm27029	chr11	protein_coding	predicted gene, 27029
chr11	101308060	101308176	-	101308060	101310501	A5SS	0.33	50	50	ENSMUST00000107257.8	ENSMUSG00000097239.8	Gm27029	chr11	protein_coding	predicted gene, 27029
chr11	101308060	101308166	-	101308060	101308176	A5SS	0.33	50	50	ENSMUST00000070395.9	ENSMUSG00000075528.14	Aarsd1	chr11	protein_coding	alanyl-tRNA synthetase domain containing 1
chr11	101310012	101312691	-	101310012;101310554	101310501;101312691	ES	0.25	50	50	ENSMUST00000107252.9	ENSMUSG00000097487.8	Ptges3l	chr11	protein_coding	prostaglandin E synthase 3 like
chr11	101312020	101312691	-	101310012	101312691	A3SS	0.25	50	50	ENSMUST00000103102.10	ENSMUSG00000097487.8	Ptges3l	chr11	protein_coding	prostaglandin E synthase 3 like
chr11	101312477	101312691	-	101310012	101312691	A3SS	0.25	50	50	ENSMUST00000103102.10	ENSMUSG00000097487.8	Ptges3l	chr11	protein_coding	prostaglandin E synthase 3 like
chr11	101312477	101312691	-	101312020	101312691	A3SS	0.25	50	50	ENSMUST00000093933.11	ENSMUSG00000097487.8	Ptges3l	chr11	protein_coding	prostaglandin E synthase 3 like
chr11	101334496;101334825	101334781;101336046	+	101334496	101336046	cassetteExon	0.5	100	100	ENSMUST00000077856.13	ENSMUSG00000063316.14	Rpl27	chr11	protein_coding	ribosomal protein L27
chr11	101347490	101348242	+	101347490;101348163	101348016;101348242	ES	0.5	50	50	ENSMUST00000010502.13	ENSMUSG00000010358.14	Ifi35	chr11	protein_coding	interferon-induced protein 35
chr11	101347490	101348242	+	101347490	101348016	A3SS	0.5	50	50	ENSMUST00000125958.2	ENSMUSG00000010358.14	Ifi35	chr11	protein_coding	interferon-induced protein 35
chr11	101359265	101359759	+	101356759	101359759	A5SS	0.5	50	50	ENSMUST00000153185.8	ENSMUSG00000001313.13	Rnd2	chr11	protein_coding	Rho family GTPase 2
chr11	101422985	101426354	-	101422985;101424853	101424765;101426354	ES	0.5	50	50	ENSMUST00000017290.11	ENSMUSG00000017146.13	Brca1	chr11	protein_coding	breast cancer 1, early onset
chr11	101430860	101442352	-	101430860	101439841	A5SS&ES	0.5	50	50	ENSMUST00000017290.11	ENSMUSG00000017146.13	Brca1	chr11	protein_coding	breast cancer 1, early onset
chr11	101415223	101415372	-	101415236	101415372	A3SS	0.5	50	50	ENSMUST00000191198.2	ENSMUSG00000017146.13	Brca1	chr11	protein_coding	breast cancer 1, early onset
chr11	101443411	101446636	+	101443411;101444924	101444814;101446636	ES	0.33	50	50	ENSMUST00000103099.8	ENSMUSG00000017119.21	Nbr1	chr11	protein_coding	NBR1, autophagy cargo receptor
chr11	101462803	101463634	+	101462803;101463398	101463288;101463634	ES	0.5	50	50	ENSMUST00000103099.8	ENSMUSG00000017119.21	Nbr1	chr11	protein_coding	NBR1, autophagy cargo receptor
chr11	101463798	101465825	+	101463798;101464003	101463929;101465825	ES	0.5	50	50	ENSMUST00000103099.8	ENSMUSG00000017119.21	Nbr1	chr11	protein_coding	NBR1, autophagy cargo receptor
chr11	101467235	101468758	+	101467235;101468077	101468020;101468758	ES	0.5	50	50	ENSMUST00000103099.8	ENSMUSG00000017119.21	Nbr1	chr11	protein_coding	NBR1, autophagy cargo receptor
chr11	101468077	101471411	+	101468077;101468863	101468758;101471411	ES	0.5	50	50	ENSMUST00000103099.8	ENSMUSG00000017119.21	Nbr1	chr11	protein_coding	NBR1, autophagy cargo receptor
chr11	101447117;101447971	101447867;101450345	+	101447117	101450345	cassetteExon	0.5	100	100	ENSMUST00000103099.8	ENSMUSG00000017119.21	Nbr1	chr11	protein_coding	NBR1, autophagy cargo receptor
chr11	101443781	101444814	+	101443411	101444814	A5SS	0.5	50	50	ENSMUST00000103099.8	ENSMUSG00000017119.21	Nbr1	chr11	protein_coding	NBR1, autophagy cargo receptor
chr11	101443781	101446636	+	101444924	101446636	A5SS&ES	0.33	50	50	ENSMUST00000103099.8	ENSMUSG00000017119.21	Nbr1	chr11	protein_coding	NBR1, autophagy cargo receptor
chr11	101453066	101453123	+	101451277	101453123	A5SS	0.5	50	50	ENSMUST00000103099.8	ENSMUSG00000017119.21	Nbr1	chr11	protein_coding	NBR1, autophagy cargo receptor
chr11	101459719	101460082	+	101459434	101460082	A5SS	0.5	50	50	ENSMUST00000103099.8	ENSMUSG00000017119.21	Nbr1	chr11	protein_coding	NBR1, autophagy cargo receptor
chr11	101443781	101446636	+	101443411	101446636	A5SS	0.33	50	50	ENSMUST00000147239.8	ENSMUSG00000017119.21	Nbr1	chr11	protein_coding	NBR1, autophagy cargo receptor
chr11	101443781	101446636	+	101443781;101444924	101444814;101446636	ES	0.5	50	50	ENSMUST00000103098.9	ENSMUSG00000017119.21	Nbr1	chr11	protein_coding	NBR1, autophagy cargo receptor
chr11	101443781	101447007	+	101443781	101444814	A3SS&ES	0.33	50	50	ENSMUST00000103098.9	ENSMUSG00000017119.21	Nbr1	chr11	protein_coding	NBR1, autophagy cargo receptor
chr11	101467235;101468077	101468020;101471411	+	101467235;101468863	101468758;101471411	MXE	0.5	100	100	ENSMUST00000123558.8	ENSMUSG00000017119.21	Nbr1	chr11	protein_coding	NBR1, autophagy cargo receptor
chr11	101443781	101446636	+	101443781	101444814	A3SS&ES	0.33	50	50	ENSMUST00000149170.2	ENSMUSG00000017119.21	Nbr1	chr11	protein_coding	NBR1, autophagy cargo receptor
chr11	101444924	101446636	+	101444924	101459225	A3SS	0.5	50	50	ENSMUST00000149170.2	ENSMUSG00000017119.21	Nbr1	chr11	protein_coding	NBR1, autophagy cargo receptor
chr11	101458088	101459225	+	101444924	101459225	A5SS	0.5	50	50	ENSMUST00000149170.2	ENSMUSG00000017119.21	Nbr1	chr11	protein_coding	NBR1, autophagy cargo receptor
chr11	101443781;101444924	101444814;101459225	+	101443781;101458088	101447007;101459225	MXE	0.5	100	100	ENSMUST00000107212.8	ENSMUSG00000017119.21	Nbr1	chr11	protein_coding	NBR1, autophagy cargo receptor
chr11	101443781	101446636	+	101443781	101447007	A3SS	0.33	50	50	ENSMUST00000107212.8	ENSMUSG00000017119.21	Nbr1	chr11	protein_coding	NBR1, autophagy cargo receptor
chr11	101462803	101463634	+	101463398	101463634	5pMXE	0.5	50	50	ENSMUST00000172744.2	ENSMUSG00000017119.21	Nbr1	chr11	protein_coding	NBR1, autophagy cargo receptor
chr11	101468077	101471411	+	101468863	101471411	5pMXE	0.5	50	50	ENSMUST00000141170.2	ENSMUSG00000017119.21	Nbr1	chr11	protein_coding	NBR1, autophagy cargo receptor
chr11	101474610	101477065	+	101474610;101475335	101475272;101477065	ES	0.5	50	50	ENSMUST00000039581.14	ENSMUSG00000034947.14	Tmem106a	chr11	protein_coding	transmembrane protein 106A
chr11	101473151	101473327	+	101473151	101473451	A3SS	0.33	50	50	ENSMUST00000039581.14	ENSMUSG00000034947.14	Tmem106a	chr11	protein_coding	transmembrane protein 106A
chr11	101473151	101473469	+	101473151	101473451	A3SS	0.33	50	50	ENSMUST00000039581.14	ENSMUSG00000034947.14	Tmem106a	chr11	protein_coding	transmembrane protein 106A
chr11	101473151	101473469	+	101473151	101473327	A3SS	0.33	50	50	ENSMUST00000100403.9	ENSMUSG00000034947.14	Tmem106a	chr11	protein_coding	transmembrane protein 106A
chr11	101484810;101485795	101485746;101486209	-	101484810	101486209	cassetteExon	0.5	100	100	ENSMUST00000154147.2	ENSMUSG00000085486.3	Gm11634	chr11	protein_coding	predicted gene 11634
chr11	101501735	101501918	+	101501537	101501918	A5SS	0.5	50	50	ENSMUST00000131042.2	ENSMUSG00000086617.2	Gm11635	chr11	lncRNA	predicted gene 11635
chr11	101518890	101519099	+	101518070	101519099	A5SS	0.5	50	50	ENSMUST00000152484.8	ENSMUSG00000010362.10	Rdm1	chr11	protein_coding	RAD52 motif 1
chr11	101521805;101523968	101523841;101524628	+	101521805	101524628	cassetteExon	0.5	100	100	ENSMUST00000010506.10	ENSMUSG00000010362.10	Rdm1	chr11	protein_coding	RAD52 motif 1
chr11	101625067	101628483	+	101625067	101626204	3pMXE	0.5	50	50	ENSMUST00000125409.2	ENSMUSG00000034931.16	Dhx8	chr11	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 8
chr11	101626720	101628483	+	101625067	101628483	A5SS	0.5	50	50	ENSMUST00000129741.2	ENSMUSG00000034931.16	Dhx8	chr11	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 8
chr11	101675149	101675934	-	101675149;101675453	101675343;101675934	ES	0.33	50	50	ENSMUST00000164750.8	ENSMUSG00000017724.15	Etv4	chr11	protein_coding	ets variant 4
chr11	101667972;101672863	101672788;101674793	-	101667972	101674793	cassetteExon	0.5	100	100	ENSMUST00000164750.8	ENSMUSG00000017724.15	Etv4	chr11	protein_coding	ets variant 4
chr11	101665053	101666144	-	101665071	101666144	A3SS	0.5	50	50	ENSMUST00000164750.8	ENSMUSG00000017724.15	Etv4	chr11	protein_coding	ets variant 4
chr11	101666270	101667919	-	101666267	101667919	A3SS	0.5	50	50	ENSMUST00000164750.8	ENSMUSG00000017724.15	Etv4	chr11	protein_coding	ets variant 4
chr11	101675152	101675934	-	101675453	101675934	A3SS&ES	0.33	50	50	ENSMUST00000164750.8	ENSMUSG00000017724.15	Etv4	chr11	protein_coding	ets variant 4
chr11	101675453	101675616	-	101675453	101675934	A5SS	0.5	50	50	ENSMUST00000164750.8	ENSMUSG00000017724.15	Etv4	chr11	protein_coding	ets variant 4
chr11	101675152	101675934	-	101675149	101675934	A3SS	0.33	50	50	ENSMUST00000131862.8	ENSMUSG00000017724.15	Etv4	chr11	protein_coding	ets variant 4
chr11	101675149	101675934	-	101675149	101675343	5pMXE	0.5	50	50	ENSMUST00000154512.2	ENSMUSG00000017724.15	Etv4	chr11	protein_coding	ets variant 4
chr11	101872669	101875438	-	101872669	101874270	5pMXE	0.5	50	50	ENSMUST00000151678.8	ENSMUSG00000003518.14	Dusp3	chr11	protein_coding	dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related)
chr11	101871548	101872443	-	101865765	101872443	A3SS	0.5	50	50	ENSMUST00000151678.8	ENSMUSG00000003518.14	Dusp3	chr11	protein_coding	dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related)
chr11	101865765	101875438	-	101865765;101872669	101872443;101875438	ES	0.5	50	50	ENSMUST00000003612.13	ENSMUSG00000003518.14	Dusp3	chr11	protein_coding	dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related)
chr11	101875577;101877081	101876948;101877693	-	101875577	101877693	cassetteExon	0.5	100	100	ENSMUST00000107173.9	ENSMUSG00000003518.14	Dusp3	chr11	protein_coding	dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related)
chr11	101865765	101875438	-	101865765	101872443	5pMXE	0.5	50	50	ENSMUST00000125794.2	ENSMUSG00000003518.14	Dusp3	chr11	protein_coding	dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related)
chr11	101875204	101879272	+	101875204;101878843	101878773;101879272	ES	0.5	50	50	ENSMUST00000176722.8	ENSMUSG00000010841.14	Cfap97d1	chr11	protein_coding	CFAP97 domain containing 1
chr11	101878063	101878773	+	101875204	101878773	A5SS	0.5	50	50	ENSMUST00000176722.8	ENSMUSG00000010841.14	Cfap97d1	chr11	protein_coding	CFAP97 domain containing 1
chr11	101916682	101918953	-	101916682	101917693	5pMXE	0.33	50	50	ENSMUST00000132094.8	ENSMUSG00000052373.15	Mpp3	chr11	protein_coding	membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)
chr11	101916682	101917365	-	101916682	101917693	A5SS	0.33	50	50	ENSMUST00000132094.8	ENSMUSG00000052373.15	Mpp3	chr11	protein_coding	membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)
chr11	101916682	101917365	-	101916682	101918953	A5SS	0.33	50	50	ENSMUST00000107168.8	ENSMUSG00000052373.15	Mpp3	chr11	protein_coding	membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)
chr11	101934130	101937932	+	101934130;101937024	101936893;101937932	ES	0.5	50	50	ENSMUST00000123895.8	ENSMUSG00000017309.12	Cd300lg	chr11	protein_coding	CD300 molecule like family member G
chr11	101934130	101937680	+	101934130	101936893	A3SS&ES	0.33	50	50	ENSMUST00000123895.8	ENSMUSG00000017309.12	Cd300lg	chr11	protein_coding	CD300 molecule like family member G
chr11	101937024	101937680	+	101937024	101937932	A3SS	0.5	50	50	ENSMUST00000123895.8	ENSMUSG00000017309.12	Cd300lg	chr11	protein_coding	CD300 molecule like family member G
chr11	101934130	101937680	+	101934130	101937932	A3SS	0.33	50	50	ENSMUST00000017453.12	ENSMUSG00000017309.12	Cd300lg	chr11	protein_coding	CD300 molecule like family member G
chr11	101934130;101937024	101936893;101937680	+	101934130	101937680	cassetteExon	0.5	100	100	ENSMUST00000107163.9	ENSMUSG00000017309.12	Cd300lg	chr11	protein_coding	CD300 molecule like family member G
chr11	101934130	101937932	+	101934130	101936893	A3SS&ES	0.33	50	50	ENSMUST00000107164.3	ENSMUSG00000017309.12	Cd300lg	chr11	protein_coding	CD300 molecule like family member G
chr11	101976188;101979104	101978967;101979246	-	101976188	101979246	cassetteExon	0.5	100	100	ENSMUST00000017458.11	ENSMUSG00000017314.13	Mpp2	chr11	protein_coding	membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
chr11	101976188;101979152	101978967;101979246	-	101976188	101979246	cassetteExon	0.5	100	100	ENSMUST00000017458.11	ENSMUSG00000017314.13	Mpp2	chr11	protein_coding	membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
chr11	101953208	101954129	-	101953208	101954014	A5SS	0.5	50	50	ENSMUST00000017458.11	ENSMUSG00000017314.13	Mpp2	chr11	protein_coding	membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
chr11	101971597	101973155	-	101971597	101976126	A5SS	0.5	50	50	ENSMUST00000017458.11	ENSMUSG00000017314.13	Mpp2	chr11	protein_coding	membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
chr11	101979152	101979246	-	101979104	101979246	A3SS	0.33	50	50	ENSMUST00000130903.8	ENSMUSG00000017314.13	Mpp2	chr11	protein_coding	membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
chr11	101990892	101990992	-	101990892	101990996	A5SS	0.5	50	50	ENSMUST00000170554.9	ENSMUSG00000017316.14	Ppy	chr11	protein_coding	pancreatic polypeptide
chr11	101997692	101997799	-	101997692	101997793	A5SS	0.5	50	50	ENSMUST00000177304.8	ENSMUSG00000017311.16	Pyy	chr11	protein_coding	peptide YY
chr11	102046730	102046970	-	102046730	102047034	A5SS	0.5	50	50	ENSMUST00000021296.7	ENSMUSG00000020921.7	Tmem101	chr11	protein_coding	transmembrane protein 101
chr11	102054993;102055462	102055370;102056186	-	102054993	102056186	cassetteExon	0.5	100	100	ENSMUST00000107156.9	ENSMUSG00000020922.12	Lsm12	chr11	protein_coding	LSM12 homolog
chr11	102056312	102073684	-	102056312	102057913	A5SS&ES	0.5	50	50	ENSMUST00000107156.9	ENSMUSG00000020922.12	Lsm12	chr11	protein_coding	LSM12 homolog
chr11	102058022	102073684	-	102058022	102075949	A5SS	0.5	50	50	ENSMUST00000107156.9	ENSMUSG00000020922.12	Lsm12	chr11	protein_coding	LSM12 homolog
chr11	102056312	102073684	-	102056312;102058022	102057913;102073684	ES	0.5	50	50	ENSMUST00000021297.6	ENSMUSG00000020922.12	Lsm12	chr11	protein_coding	LSM12 homolog
chr11	102073817	102075870	-	102073817	102075909	A5SS	0.5	50	50	ENSMUST00000021297.6	ENSMUSG00000020922.12	Lsm12	chr11	protein_coding	LSM12 homolog
chr11	102056312	102073684	-	102058022	102073684	3pMXE	0.5	50	50	ENSMUST00000153276.2	ENSMUSG00000020922.12	Lsm12	chr11	protein_coding	LSM12 homolog
chr11	102083389	102083911	+	102083389;102083693	102083575;102083911	ES	0.33	50	50	ENSMUST00000070334.10	ENSMUSG00000034793.16	G6pc3	chr11	protein_coding	glucose 6 phosphatase, catalytic, 3
chr11	102080969;102081262	102081086;102082861	+	102080969	102082861	cassetteExon	0.5	100	100	ENSMUST00000070334.10	ENSMUSG00000034793.16	G6pc3	chr11	protein_coding	glucose 6 phosphatase, catalytic, 3
chr11	102082967;102083389	102083299;102083911	+	102082967	102083911	cassetteExon	0.5	100	100	ENSMUST00000139995.2	ENSMUSG00000034793.16	G6pc3	chr11	protein_coding	glucose 6 phosphatase, catalytic, 3
chr11	102082967;102083693	102083299;102083911	+	102082967	102083911	cassetteExon	0.5	100	100	ENSMUST00000139995.2	ENSMUSG00000034793.16	G6pc3	chr11	protein_coding	glucose 6 phosphatase, catalytic, 3
chr11	102082967	102083911	+	102082967	102083299	A3SS&ES	0.5	50	50	ENSMUST00000145490.8	ENSMUSG00000034793.16	G6pc3	chr11	protein_coding	glucose 6 phosphatase, catalytic, 3
chr11	102083389	102083911	+	102083389	102083575	A3SS	0.5	50	50	ENSMUST00000145490.8	ENSMUSG00000034793.16	G6pc3	chr11	protein_coding	glucose 6 phosphatase, catalytic, 3
chr11	102097992;102104862	102104751;102109242	-	102097992	102109242	cassetteExon	0.5	100	100	ENSMUST00000107151.9	ENSMUSG00000008855.18	Hdac5	chr11	protein_coding	histone deacetylase 5
chr11	102086720	102086778	-	102086694	102086778	A3SS	0.5	50	50	ENSMUST00000107151.9	ENSMUSG00000008855.18	Hdac5	chr11	protein_coding	histone deacetylase 5
chr11	102091359	102092059	-	102090511	102092059	A3SS	0.5	50	50	ENSMUST00000107151.9	ENSMUSG00000008855.18	Hdac5	chr11	protein_coding	histone deacetylase 5
chr11	102109313	102115560	-	102109316	102115560	A3SS	0.2	50	50	ENSMUST00000107151.9	ENSMUSG00000008855.18	Hdac5	chr11	protein_coding	histone deacetylase 5
chr11	102109607	102115560	-	102109316	102115560	A3SS	0.2	50	50	ENSMUST00000107151.9	ENSMUSG00000008855.18	Hdac5	chr11	protein_coding	histone deacetylase 5
chr11	102110107	102115560	-	102109316	102115560	A3SS	0.2	50	50	ENSMUST00000107151.9	ENSMUSG00000008855.18	Hdac5	chr11	protein_coding	histone deacetylase 5
chr11	102112677	102115560	-	102109316	102115560	A3SS	0.2	50	50	ENSMUST00000107151.9	ENSMUSG00000008855.18	Hdac5	chr11	protein_coding	histone deacetylase 5
chr11	102086694	102086774	-	102086694	102086778	A5SS	0.5	50	50	ENSMUST00000107151.9	ENSMUSG00000008855.18	Hdac5	chr11	protein_coding	histone deacetylase 5
chr11	102090511	102090795	-	102090511	102092059	A5SS	0.5	50	50	ENSMUST00000107151.9	ENSMUSG00000008855.18	Hdac5	chr11	protein_coding	histone deacetylase 5
chr11	102110107	102115560	-	102110107;102112677	102112594;102115560	ES	0.2	50	50	ENSMUST00000008999.12	ENSMUSG00000008855.18	Hdac5	chr11	protein_coding	histone deacetylase 5
chr11	102109313	102115560	-	102112677	102115560	A3SS&ES	0.2	50	50	ENSMUST00000008999.12	ENSMUSG00000008855.18	Hdac5	chr11	protein_coding	histone deacetylase 5
chr11	102097992	102120831	-	102097992	102109242	5pMXE	0.33	50	50	ENSMUST00000149087.8	ENSMUSG00000008855.18	Hdac5	chr11	protein_coding	histone deacetylase 5
chr11	102109313;102109607	102109513;102115560	-	102109313	102115560	cassetteExon	0.5	100	100	ENSMUST00000124077.8	ENSMUSG00000008855.18	Hdac5	chr11	protein_coding	histone deacetylase 5
chr11	102110107	102115560	-	102109313	102115560	A3SS	0.2	50	50	ENSMUST00000124077.8	ENSMUSG00000008855.18	Hdac5	chr11	protein_coding	histone deacetylase 5
chr11	102115781	102120831	-	102097992	102120831	A3SS	0.5	50	50	ENSMUST00000156337.2	ENSMUSG00000008855.18	Hdac5	chr11	protein_coding	histone deacetylase 5
chr11	102097992	102104751	-	102097992	102120831	A5SS	0.33	50	50	ENSMUST00000156337.2	ENSMUSG00000008855.18	Hdac5	chr11	protein_coding	histone deacetylase 5
chr11	102109313	102115560	-	102109313	102109513	5pMXE	0.5	50	50	ENSMUST00000131254.2	ENSMUSG00000008855.18	Hdac5	chr11	protein_coding	histone deacetylase 5
chr11	102109313	102115560	-	102109607	102115560	3pMXE	0.2	50	50	ENSMUST00000128686.8	ENSMUSG00000008855.18	Hdac5	chr11	protein_coding	histone deacetylase 5
chr11	102109607;102110107	102109971;102115560	-	102109607	102115560	cassetteExon	0.5	100	100	ENSMUST00000128686.8	ENSMUSG00000008855.18	Hdac5	chr11	protein_coding	histone deacetylase 5
chr11	102112677	102115560	-	102109607	102115560	A3SS	0.2	50	50	ENSMUST00000128686.8	ENSMUSG00000008855.18	Hdac5	chr11	protein_coding	histone deacetylase 5
chr11	102109607	102115560	-	102110107	102115560	3pMXE	0.2	50	50	ENSMUST00000125072.2	ENSMUSG00000008855.18	Hdac5	chr11	protein_coding	histone deacetylase 5
chr11	102148796	102150660	+	102148796;102150286	102150146;102150660	ES	0.33	50	50	ENSMUST00000133930.8	ENSMUSG00000034773.17	Hrob	chr11	protein_coding	homologous recombination factor with OB-fold
chr11	102153126	102155461	+	102153126;102155012	102154747;102155461	ES	0.5	50	50	ENSMUST00000133930.8	ENSMUSG00000034773.17	Hrob	chr11	protein_coding	homologous recombination factor with OB-fold
chr11	102146847;102148796	102148713;102150660	+	102146847	102150660	cassetteExon	0.5	100	100	ENSMUST00000148867.8	ENSMUSG00000034773.17	Hrob	chr11	protein_coding	homologous recombination factor with OB-fold
chr11	102150286	102150660	+	102146847	102150660	A5SS	0.33	50	50	ENSMUST00000148867.8	ENSMUSG00000034773.17	Hrob	chr11	protein_coding	homologous recombination factor with OB-fold
chr11	102175914	102178134	+	102175914;102176544	102176490;102178134	ES	0.33	50	50	ENSMUST00000036376.13	ENSMUSG00000034757.16	Tmub2	chr11	protein_coding	transmembrane and ubiquitin-like domain containing 2
chr11	102175914;102176942	102176806;102178134	+	102175914;102176544	102176490;102178134	MXE	0.5	100	100	ENSMUST00000036376.13	ENSMUSG00000034757.16	Tmub2	chr11	protein_coding	transmembrane and ubiquitin-like domain containing 2
chr11	102175914	102178406	+	102175914	102176490	A3SS&ES	0.25	50	50	ENSMUST00000036376.13	ENSMUSG00000034757.16	Tmub2	chr11	protein_coding	transmembrane and ubiquitin-like domain containing 2
chr11	102175914	102176806	+	102175914	102178406	A3SS	0.25	50	50	ENSMUST00000135551.2	ENSMUSG00000034757.16	Tmub2	chr11	protein_coding	transmembrane and ubiquitin-like domain containing 2
chr11	102175914	102178134	+	102175914	102178406	A3SS	0.25	50	50	ENSMUST00000135551.2	ENSMUSG00000034757.16	Tmub2	chr11	protein_coding	transmembrane and ubiquitin-like domain containing 2
chr11	102175914;102176942	102176490;102178134	+	102175914	102178134	cassetteExon	0.5	100	100	ENSMUST00000100387.11	ENSMUSG00000034757.16	Tmub2	chr11	protein_coding	transmembrane and ubiquitin-like domain containing 2
chr11	102175914;102176942	102176806;102178134	+	102175914	102178134	cassetteExon	0.5	100	100	ENSMUST00000100387.11	ENSMUSG00000034757.16	Tmub2	chr11	protein_coding	transmembrane and ubiquitin-like domain containing 2
chr11	102175914	102178134	+	102176544	102178134	5pMXE	0.33	50	50	ENSMUST00000156326.2	ENSMUSG00000034757.16	Tmub2	chr11	protein_coding	transmembrane and ubiquitin-like domain containing 2
chr11	102176942	102178134	+	102176544	102178134	A5SS	0.33	50	50	ENSMUST00000156326.2	ENSMUSG00000034757.16	Tmub2	chr11	protein_coding	transmembrane and ubiquitin-like domain containing 2
chr11	102183921	102184102	-	102183978	102184102	A3SS	0.5	50	50	ENSMUST00000145484.2	ENSMUSG00000059995.13	Atxn7l3	chr11	protein_coding	ataxin 7-like 3
chr11	102184168	102184472	-	102184147	102184472	A3SS	0.5	50	50	ENSMUST00000141516.8	ENSMUSG00000059995.13	Atxn7l3	chr11	protein_coding	ataxin 7-like 3
chr11	102201402	102202206	-	102201402;102201862	102201752;102202206	ES	0.5	50	50	ENSMUST00000174302.8	ENSMUSG00000020923.18	Ubtf	chr11	protein_coding	upstream binding transcription factor, RNA polymerase I
chr11	102204879	102205690	-	102204879;102205048	102204965;102205690	ES	0.5	50	50	ENSMUST00000174302.8	ENSMUSG00000020923.18	Ubtf	chr11	protein_coding	upstream binding transcription factor, RNA polymerase I
chr11	102207299	102210150	-	102207299	102209674	5pMXE	0.25	50	50	ENSMUST00000174302.8	ENSMUSG00000020923.18	Ubtf	chr11	protein_coding	upstream binding transcription factor, RNA polymerase I
chr11	102197825	102197909	-	102197825	102197905	A5SS	0.5	50	50	ENSMUST00000174302.8	ENSMUSG00000020923.18	Ubtf	chr11	protein_coding	upstream binding transcription factor, RNA polymerase I
chr11	102207299	102208000	-	102207299	102209674	A5SS	0.25	50	50	ENSMUST00000174302.8	ENSMUSG00000020923.18	Ubtf	chr11	protein_coding	upstream binding transcription factor, RNA polymerase I
chr11	102207299	102208408	-	102207299	102209674	A5SS	0.25	50	50	ENSMUST00000174302.8	ENSMUSG00000020923.18	Ubtf	chr11	protein_coding	upstream binding transcription factor, RNA polymerase I
chr11	102207299	102210150	-	102207299	102208408	5pMXE	0.25	50	50	ENSMUST00000107117.9	ENSMUSG00000020923.18	Ubtf	chr11	protein_coding	upstream binding transcription factor, RNA polymerase I
chr11	102207299	102208000	-	102207299	102208408	A5SS	0.25	50	50	ENSMUST00000107117.9	ENSMUSG00000020923.18	Ubtf	chr11	protein_coding	upstream binding transcription factor, RNA polymerase I
chr11	102207299	102210150	-	102207299	102208000	5pMXE	0.25	50	50	ENSMUST00000107119.9	ENSMUSG00000020923.18	Ubtf	chr11	protein_coding	upstream binding transcription factor, RNA polymerase I
chr11	102252289	102256889	-	102252289	102255883	5pMXE	0.25	50	50	ENSMUST00000006749.10	ENSMUSG00000006574.16	Slc4a1	chr11	protein_coding	solute carrier family 4 (anion exchanger), member 1
chr11	102252289;102253525	102253452;102255883	-	102252289	102255883	cassetteExon	0.5	100	100	ENSMUST00000006749.10	ENSMUSG00000006574.16	Slc4a1	chr11	protein_coding	solute carrier family 4 (anion exchanger), member 1
chr11	102251046	102251357	-	102251046	102251967	A5SS	0.5	50	50	ENSMUST00000006749.10	ENSMUSG00000006574.16	Slc4a1	chr11	protein_coding	solute carrier family 4 (anion exchanger), member 1
chr11	102252289	102253787	-	102252289	102255883	A5SS	0.25	50	50	ENSMUST00000006749.10	ENSMUSG00000006574.16	Slc4a1	chr11	protein_coding	solute carrier family 4 (anion exchanger), member 1
chr11	102252289	102253452	-	102252289	102253787	A5SS	0.5	50	50	ENSMUST00000145636.8	ENSMUSG00000006574.16	Slc4a1	chr11	protein_coding	solute carrier family 4 (anion exchanger), member 1
chr11	102252289	102253452	-	102252289	102256889	A5SS	0.25	50	50	ENSMUST00000151050.2	ENSMUSG00000006574.16	Slc4a1	chr11	protein_coding	solute carrier family 4 (anion exchanger), member 1
chr11	102252289	102253787	-	102252289	102256889	A5SS	0.25	50	50	ENSMUST00000151050.2	ENSMUSG00000006574.16	Slc4a1	chr11	protein_coding	solute carrier family 4 (anion exchanger), member 1
chr11	102290871	102291720	+	102290871;102291624	102291463;102291720	ES	0.5	50	50	ENSMUST00000107105.9	ENSMUSG00000006575.15	Rundc3a	chr11	protein_coding	RUN domain containing 3A
chr11	102291826	102292807	+	102291826	102292215	3pMXE	0.5	50	50	ENSMUST00000107105.9	ENSMUSG00000006575.15	Rundc3a	chr11	protein_coding	RUN domain containing 3A
chr11	102288512	102288926	+	102288512	102288911	A3SS	0.5	50	50	ENSMUST00000107105.9	ENSMUSG00000006575.15	Rundc3a	chr11	protein_coding	RUN domain containing 3A
chr11	102290871	102291487	+	102290871	102291463	A3SS	0.33	50	50	ENSMUST00000107105.9	ENSMUSG00000006575.15	Rundc3a	chr11	protein_coding	RUN domain containing 3A
chr11	102290871	102291720	+	102290871;102291624	102291487;102291720	ES	0.5	50	50	ENSMUST00000107102.8	ENSMUSG00000006575.15	Rundc3a	chr11	protein_coding	RUN domain containing 3A
chr11	102290871	102291720	+	102290871	102291487	3pMXE	0.33	50	50	ENSMUST00000132876.2	ENSMUSG00000006575.15	Rundc3a	chr11	protein_coding	RUN domain containing 3A
chr11	102294361	102294617	-	102294361;102294539	102294459;102294617	ES	0.5	50	50	ENSMUST00000107098.8	ENSMUSG00000018677.10	Slc25a39	chr11	protein_coding	solute carrier family 25, member 39
chr11	102295745	102296519	-	102295745;102295905	102295838;102296519	ES	0.5	50	50	ENSMUST00000107098.8	ENSMUSG00000018677.10	Slc25a39	chr11	protein_coding	solute carrier family 25, member 39
chr11	102295905	102297032	-	102295905;102296628	102296519;102297032	ES	0.33	50	50	ENSMUST00000107098.8	ENSMUSG00000018677.10	Slc25a39	chr11	protein_coding	solute carrier family 25, member 39
chr11	102297480	102298604	-	102297480	102298216	5pMXE	0.2	50	50	ENSMUST00000107098.8	ENSMUSG00000018677.10	Slc25a39	chr11	protein_coding	solute carrier family 25, member 39
chr11	102296652	102297032	-	102296628	102297032	A3SS	0.33	50	50	ENSMUST00000107098.8	ENSMUSG00000018677.10	Slc25a39	chr11	protein_coding	solute carrier family 25, member 39
chr11	102297247	102297515	-	102297247	102297381	A5SS&ES	0.5	50	50	ENSMUST00000107098.8	ENSMUSG00000018677.10	Slc25a39	chr11	protein_coding	solute carrier family 25, member 39
chr11	102297480	102297652	-	102297480	102298216	A5SS	0.2	50	50	ENSMUST00000107098.8	ENSMUSG00000018677.10	Slc25a39	chr11	protein_coding	solute carrier family 25, member 39
chr11	102297480	102298064	-	102297480	102298216	A5SS	0.2	50	50	ENSMUST00000107098.8	ENSMUSG00000018677.10	Slc25a39	chr11	protein_coding	solute carrier family 25, member 39
chr11	102297480	102298076	-	102297480	102298216	A5SS	0.2	50	50	ENSMUST00000107098.8	ENSMUSG00000018677.10	Slc25a39	chr11	protein_coding	solute carrier family 25, member 39
chr11	102295905	102297032	-	102295905;102296652	102296519;102297032	ES	0.33	50	50	ENSMUST00000018821.9	ENSMUSG00000018677.10	Slc25a39	chr11	protein_coding	solute carrier family 25, member 39
chr11	102296628	102297381	-	102297247	102297381	A3SS&ES	0.5	50	50	ENSMUST00000018821.9	ENSMUSG00000018677.10	Slc25a39	chr11	protein_coding	solute carrier family 25, member 39
chr11	102294361	102294617	-	102294361	102294459	A5SS	0.5	50	50	ENSMUST00000153395.8	ENSMUSG00000018677.10	Slc25a39	chr11	protein_coding	solute carrier family 25, member 39
chr11	102295745;102295905	102295838;102297032	-	102295745;102296652	102296519;102297032	MXE	0.5	100	100	ENSMUST00000134669.8	ENSMUSG00000018677.10	Slc25a39	chr11	protein_coding	solute carrier family 25, member 39
chr11	102295905;102297247	102297032;102297381	-	102295905;102296628	102296519;102297381	MXE	0.5	100	100	ENSMUST00000141535.8	ENSMUSG00000018677.10	Slc25a39	chr11	protein_coding	solute carrier family 25, member 39
chr11	102296628;102297247	102297032;102297381	-	102296628	102297381	cassetteExon	0.5	100	100	ENSMUST00000141535.8	ENSMUSG00000018677.10	Slc25a39	chr11	protein_coding	solute carrier family 25, member 39
chr11	102295745;102295905	102295838;102297032	-	102295745;102296628	102296519;102297032	MXE	0.5	100	100	ENSMUST00000142097.8	ENSMUSG00000018677.10	Slc25a39	chr11	protein_coding	solute carrier family 25, member 39
chr11	102295745;102296628	102296519;102297381	-	102295745;102297247	102295838;102297381	MXE	0.5	100	100	ENSMUST00000123688.8	ENSMUSG00000018677.10	Slc25a39	chr11	protein_coding	solute carrier family 25, member 39
chr11	102297480	102298604	-	102297480	102298076	5pMXE	0.2	50	50	ENSMUST00000149777.8	ENSMUSG00000018677.10	Slc25a39	chr11	protein_coding	solute carrier family 25, member 39
chr11	102297480	102297652	-	102297480	102298076	A5SS	0.2	50	50	ENSMUST00000149777.8	ENSMUSG00000018677.10	Slc25a39	chr11	protein_coding	solute carrier family 25, member 39
chr11	102297480	102298064	-	102297480	102298076	A5SS	0.2	50	50	ENSMUST00000149777.8	ENSMUSG00000018677.10	Slc25a39	chr11	protein_coding	solute carrier family 25, member 39
chr11	102297480	102298064	-	102297480	102297652	5pMXE	0.2	50	50	ENSMUST00000130436.8	ENSMUSG00000018677.10	Slc25a39	chr11	protein_coding	solute carrier family 25, member 39
chr11	102297480	102298604	-	102297480	102297652	5pMXE	0.2	50	50	ENSMUST00000130436.8	ENSMUSG00000018677.10	Slc25a39	chr11	protein_coding	solute carrier family 25, member 39
chr11	102297480	102298604	-	102297480	102298064	5pMXE	0.2	50	50	ENSMUST00000154001.8	ENSMUSG00000018677.10	Slc25a39	chr11	protein_coding	solute carrier family 25, member 39
chr11	102295745	102296519	-	102295905	102296519	3pMXE	0.5	50	50	ENSMUST00000147160.8	ENSMUSG00000018677.10	Slc25a39	chr11	protein_coding	solute carrier family 25, member 39
chr11	102295905	102297032	-	102296652	102297032	3pMXE	0.33	50	50	ENSMUST00000147860.2	ENSMUSG00000018677.10	Slc25a39	chr11	protein_coding	solute carrier family 25, member 39
chr11	102326317	102326595	+	102326317	102326535	A3SS	0.5	50	50	ENSMUST00000239431.2	ENSMUSG00000034708.13	Grn	chr11	protein_coding	granulin
chr11	102327074	102327175	+	102327074	102327161	A3SS	0.5	50	50	ENSMUST00000239431.2	ENSMUSG00000034708.13	Grn	chr11	protein_coding	granulin
chr11	102321528	102323791	+	102321366	102323791	A5SS	0.5	50	50	ENSMUST00000239431.2	ENSMUSG00000034708.13	Grn	chr11	protein_coding	granulin
chr11	102330355	102330486	-	102330384	102330486	A3SS	0.5	50	50	ENSMUST00000049057.5	ENSMUSG00000034685.5	Fam171a2	chr11	protein_coding	family with sequence similarity 171, member A2
chr11	102334568	102334998	-	102334568	102334790	A5SS	0.5	50	50	ENSMUST00000049057.5	ENSMUSG00000034685.5	Fam171a2	chr11	protein_coding	family with sequence similarity 171, member A2
chr11	102350846	102351342	-	102350846;102351031	102350964;102351342	ES	0.5	50	50	ENSMUST00000103086.4	ENSMUSG00000034664.14	Itga2b	chr11	protein_coding	integrin alpha 2b
chr11	102347170	102347791	-	102347172	102347791	A3SS	0.5	50	50	ENSMUST00000103086.4	ENSMUSG00000034664.14	Itga2b	chr11	protein_coding	integrin alpha 2b
chr11	102357348	102357659	-	102357348	102357880	A5SS	0.5	50	50	ENSMUST00000103086.4	ENSMUSG00000034664.14	Itga2b	chr11	protein_coding	integrin alpha 2b
chr11	102358727	102360264	-	102358727	102360351	A5SS	0.5	50	50	ENSMUST00000103086.4	ENSMUSG00000034664.14	Itga2b	chr11	protein_coding	integrin alpha 2b
chr11	102378456;102379622	102379573;102391629	-	102378456	102391629	cassetteExon	0.5	100	100	ENSMUST00000143842.2	ENSMUSG00000034621.15	Gpatch8	chr11	protein_coding	G patch domain containing 8
chr11	102399037;102401087	102401043;102418920	-	102399037	102418920	cassetteExon	0.5	100	100	ENSMUST00000143842.2	ENSMUSG00000034621.15	Gpatch8	chr11	protein_coding	G patch domain containing 8
chr11	102418992;102422156	102422139;102429108	-	102418992	102429108	cassetteExon	0.5	100	100	ENSMUST00000143842.2	ENSMUSG00000034621.15	Gpatch8	chr11	protein_coding	G patch domain containing 8
chr11	102418992;102427972	102427938;102429108	-	102418992	102429108	cassetteExon	0.5	100	100	ENSMUST00000143842.2	ENSMUSG00000034621.15	Gpatch8	chr11	protein_coding	G patch domain containing 8
chr11	102418992;102427972	102427938;102429108	-	102418992;102422156	102422139;102429108	MXE	0.5	100	100	ENSMUST00000131573.8	ENSMUSG00000034621.15	Gpatch8	chr11	protein_coding	G patch domain containing 8
chr11	102418992	102429108	-	102427972	102429108	3pMXE	0.33	50	50	ENSMUST00000127018.2	ENSMUSG00000034621.15	Gpatch8	chr11	protein_coding	G patch domain containing 8
chr11	102422156	102429108	-	102427972	102429108	3pMXE	0.33	50	50	ENSMUST00000127018.2	ENSMUSG00000034621.15	Gpatch8	chr11	protein_coding	G patch domain containing 8
chr11	102467623;102467905	102467725;102469576	-	102467623	102469576	cassetteExon	0.5	100	100	ENSMUST00000107081.8	ENSMUSG00000078640.10	Gm11627	chr11	protein_coding	predicted gene 11627
chr11	102469721	102469814	-	102469721	102470016	A5SS	0.33	50	50	ENSMUST00000107081.8	ENSMUSG00000078640.10	Gm11627	chr11	protein_coding	predicted gene 11627
chr11	102469721	102469987	-	102469721	102470016	A5SS	0.33	50	50	ENSMUST00000107081.8	ENSMUSG00000078640.10	Gm11627	chr11	protein_coding	predicted gene 11627
chr11	102469721	102469814	-	102469721	102469987	A5SS	0.33	50	50	ENSMUST00000139829.2	ENSMUSG00000078640.10	Gm11627	chr11	protein_coding	predicted gene 11627
chr11	102556596	102557162	+	102554584	102557162	A5SS	0.33	50	50	ENSMUST00000156590.8	ENSMUSG00000051455.14	Meioc	chr11	protein_coding	meiosis specific with coiled-coil domain
chr11	102556656	102557162	+	102554584	102557162	A5SS	0.33	50	50	ENSMUST00000156590.8	ENSMUSG00000051455.14	Meioc	chr11	protein_coding	meiosis specific with coiled-coil domain
chr11	102556596	102557162	+	102556656	102557162	A5SS	0.33	50	50	ENSMUST00000100378.4	ENSMUSG00000051455.14	Meioc	chr11	protein_coding	meiosis specific with coiled-coil domain
chr11	102577322	102581027	-	102577322;102579685	102579627;102581027	ES	0.5	50	50	ENSMUST00000092569.13	ENSMUSG00000020925.17	Ccdc43	chr11	protein_coding	coiled-coil domain containing 43
chr11	102577322	102581027	-	102577322	102579627	A5SS&ES	0.5	50	50	ENSMUST00000164506.3	ENSMUSG00000020925.17	Ccdc43	chr11	protein_coding	coiled-coil domain containing 43
chr11	102577322	102581027	-	102579685	102581027	3pMXE	0.5	50	50	ENSMUST00000153157.8	ENSMUSG00000020925.17	Ccdc43	chr11	protein_coding	coiled-coil domain containing 43
chr11	102667904	102668957	+	102667904;102668474	102668457;102668957	ES	0.5	50	50	ENSMUST00000103081.10	ENSMUSG00000020926.17	Adam11	chr11	protein_coding	a disintegrin and metallopeptidase domain 11
chr11	102662336	102662563	+	102662336	102662741	A3SS	0.5	50	50	ENSMUST00000103081.10	ENSMUSG00000020926.17	Adam11	chr11	protein_coding	a disintegrin and metallopeptidase domain 11
chr11	102665339	102665466	+	102665339	102665458	A3SS	0.5	50	50	ENSMUST00000103081.10	ENSMUSG00000020926.17	Adam11	chr11	protein_coding	a disintegrin and metallopeptidase domain 11
chr11	102667904	102668957	+	102667904	102668457	A3SS	0.5	50	50	ENSMUST00000068150.7	ENSMUSG00000020926.17	Adam11	chr11	protein_coding	a disintegrin and metallopeptidase domain 11
chr11	102693742	102709796	-	102693742	102695107	5pMXE	0.25	50	50	ENSMUST00000107075.9	ENSMUSG00000034520.15	Gjc1	chr11	protein_coding	gap junction protein, gamma 1
chr11	102693742	102709886	-	102693742	102695107	5pMXE	0.25	50	50	ENSMUST00000107075.9	ENSMUSG00000034520.15	Gjc1	chr11	protein_coding	gap junction protein, gamma 1
chr11	102693742	102710330	-	102693742	102695107	5pMXE	0.25	50	50	ENSMUST00000107075.9	ENSMUSG00000034520.15	Gjc1	chr11	protein_coding	gap junction protein, gamma 1
chr11	102693742	102710330	-	102693742	102709796	5pMXE	0.25	50	50	ENSMUST00000068933.12	ENSMUSG00000034520.15	Gjc1	chr11	protein_coding	gap junction protein, gamma 1
chr11	102693742	102709886	-	102693742	102709796	A5SS	0.25	50	50	ENSMUST00000068933.12	ENSMUSG00000034520.15	Gjc1	chr11	protein_coding	gap junction protein, gamma 1
chr11	102693742	102709886	-	102693742	102710330	A5SS	0.25	50	50	ENSMUST00000092567.11	ENSMUSG00000034520.15	Gjc1	chr11	protein_coding	gap junction protein, gamma 1
chr11	102727350	102727439	+	102726786	102727439	A5SS	0.5	50	50	ENSMUST00000107073.8	ENSMUSG00000020928.15	Higd1b	chr11	protein_coding	HIG1 domain family, member 1B
chr11	102761072	102768436	-	102761072;102762011	102761846;102768436	ES	0.33	50	50	ENSMUST00000021306.14	ENSMUSG00000020929.15	Eftud2	chr11	protein_coding	elongation factor Tu GTP binding domain containing 2
chr11	102729620	102734966	-	102734258	102734966	A3SS&ES	0.5	50	50	ENSMUST00000021306.14	ENSMUSG00000020929.15	Eftud2	chr11	protein_coding	elongation factor Tu GTP binding domain containing 2
chr11	102730907	102731090	-	102730944	102731090	A3SS	0.5	50	50	ENSMUST00000021306.14	ENSMUSG00000020929.15	Eftud2	chr11	protein_coding	elongation factor Tu GTP binding domain containing 2
chr11	102759448	102759921	-	102759478	102759921	A3SS	0.5	50	50	ENSMUST00000021306.14	ENSMUSG00000020929.15	Eftud2	chr11	protein_coding	elongation factor Tu GTP binding domain containing 2
chr11	102762008	102768436	-	102762011	102768436	A3SS	0.33	50	50	ENSMUST00000021306.14	ENSMUSG00000020929.15	Eftud2	chr11	protein_coding	elongation factor Tu GTP binding domain containing 2
chr11	102761072	102768436	-	102761072;102762008	102761846;102768436	ES	0.33	50	50	ENSMUST00000107060.8	ENSMUSG00000020929.15	Eftud2	chr11	protein_coding	elongation factor Tu GTP binding domain containing 2
chr11	102774032	102774630	+	102774032	102774679	A3SS	0.5	50	50	ENSMUST00000021307.10	ENSMUSG00000020930.10	Ccdc103	chr11	protein_coding	coiled-coil domain containing 103
chr11	102786636	102791593	-	102786636	102787492	5pMXE	0.5	50	50	ENSMUST00000067444.10	ENSMUSG00000020932.15	Gfap	chr11	protein_coding	glial fibrillary acidic protein
chr11	102782346	102782737	-	102780346	102782737	A3SS	0.5	50	50	ENSMUST00000067444.10	ENSMUSG00000020932.15	Gfap	chr11	protein_coding	glial fibrillary acidic protein
chr11	102807341;102815539	102815294;102815809	-	102807341	102815809	cassetteExon	0.5	100	100	ENSMUST00000021311.10	ENSMUSG00000051378.11	Kif18b	chr11	protein_coding	kinesin family member 18B
chr11	102891182	102918086	-	102891182	102907876	5pMXE	0.5	50	50	ENSMUST00000021313.9	ENSMUSG00000020935.9	Dcakd	chr11	protein_coding	dephospho-CoA kinase domain containing
chr11	102918247;102918898	102918814;102918975	-	102918247	102918975	cassetteExon	0.5	100	100	ENSMUST00000155490.3	ENSMUSG00000020935.9	Dcakd	chr11	protein_coding	dephospho-CoA kinase domain containing
chr11	102919528	102937205	+	102919528	102933994	3pMXE	0.5	50	50	ENSMUST00000135332.2	ENSMUSG00000020936.9	Nmt1	chr11	protein_coding	N-myristoyltransferase 1
chr11	102919528	102937205	+	102919528;102934102	102933994;102937205	ES	0.5	50	50	ENSMUST00000021314.8	ENSMUSG00000020936.9	Nmt1	chr11	protein_coding	N-myristoyltransferase 1
chr11	102961755	102962081	-	102961755;102961985	102961836;102962081	ES	0.5	50	50	ENSMUST00000128650.8	ENSMUSG00000020937.15	Plcd3	chr11	protein_coding	phospholipase C, delta 3
chr11	102968788	102969065	-	102968690	102969065	A3SS	0.5	50	50	ENSMUST00000128650.8	ENSMUSG00000020937.15	Plcd3	chr11	protein_coding	phospholipase C, delta 3
chr11	102971491;102991432	102991276;102992206	-	102971491	102992206	cassetteExon	0.5	100	100	ENSMUST00000103077.2	ENSMUSG00000020937.15	Plcd3	chr11	protein_coding	phospholipase C, delta 3
chr11	102972768	102992206	-	102971491	102992206	A3SS	0.33	50	50	ENSMUST00000103077.2	ENSMUSG00000020937.15	Plcd3	chr11	protein_coding	phospholipase C, delta 3
chr11	102972768	102992206	-	102991432	102992206	A3SS&ES	0.33	50	50	ENSMUST00000143012.2	ENSMUSG00000020937.15	Plcd3	chr11	protein_coding	phospholipase C, delta 3
chr11	102993922;102994195	102994061;102994352	+	102993922	102994352	cassetteExon	0.5	100	100	ENSMUST00000107040.10	ENSMUSG00000056938.17	Acbd4	chr11	protein_coding	acyl-Coenzyme A binding domain containing 4
chr11	102994470;102994846	102994726;102994919	+	102994470	102994919	cassetteExon	0.5	100	100	ENSMUST00000107040.10	ENSMUSG00000056938.17	Acbd4	chr11	protein_coding	acyl-Coenzyme A binding domain containing 4
chr11	102997060;103002256	103002108;103002368	+	102997060	103002368	cassetteExon	0.5	100	100	ENSMUST00000107040.10	ENSMUSG00000056938.17	Acbd4	chr11	protein_coding	acyl-Coenzyme A binding domain containing 4
chr11	102992614	102993865	+	102992614	102993508	A3SS	0.5	50	50	ENSMUST00000107040.10	ENSMUSG00000056938.17	Acbd4	chr11	protein_coding	acyl-Coenzyme A binding domain containing 4
chr11	102993971	102994352	+	102993922	102994352	A5SS	0.33	50	50	ENSMUST00000107040.10	ENSMUSG00000056938.17	Acbd4	chr11	protein_coding	acyl-Coenzyme A binding domain containing 4
chr11	102993971	102994352	+	102993971;102994195	102994061;102994352	ES	0.33	50	50	ENSMUST00000130749.9	ENSMUSG00000056938.17	Acbd4	chr11	protein_coding	acyl-Coenzyme A binding domain containing 4
chr11	102994470	102994919	+	102994470	102994726	3pMXE	0.5	50	50	ENSMUST00000130749.9	ENSMUSG00000056938.17	Acbd4	chr11	protein_coding	acyl-Coenzyme A binding domain containing 4
chr11	102993922	102994061	+	102993971	102994061	A5SS	0.5	50	50	ENSMUST00000130749.9	ENSMUSG00000056938.17	Acbd4	chr11	protein_coding	acyl-Coenzyme A binding domain containing 4
chr11	102993922	102994352	+	102994195	102994352	A5SS&ES	0.33	50	50	ENSMUST00000130749.9	ENSMUSG00000056938.17	Acbd4	chr11	protein_coding	acyl-Coenzyme A binding domain containing 4
chr11	102993922	102994352	+	102993922	102994061	3pMXE	0.5	50	50	ENSMUST00000146176.8	ENSMUSG00000056938.17	Acbd4	chr11	protein_coding	acyl-Coenzyme A binding domain containing 4
chr11	102993971	102994352	+	102994195	102994352	A5SS&ES	0.33	50	50	ENSMUST00000134884.8	ENSMUSG00000056938.17	Acbd4	chr11	protein_coding	acyl-Coenzyme A binding domain containing 4
chr11	103024248	103024861	+	103023917	103024861	A5SS	0.33	50	50	ENSMUST00000150275.8	ENSMUSG00000043372.13	Hexim2	chr11	protein_coding	hexamethylene bis-acetamide inducible 2
chr11	103024283	103024861	+	103023917	103024861	A5SS	0.33	50	50	ENSMUST00000150275.8	ENSMUSG00000043372.13	Hexim2	chr11	protein_coding	hexamethylene bis-acetamide inducible 2
chr11	103024248	103024858	+	103024248	103024861	A3SS	0.5	50	50	ENSMUST00000107037.8	ENSMUSG00000043372.13	Hexim2	chr11	protein_coding	hexamethylene bis-acetamide inducible 2
chr11	103024283	103024861	+	103024248	103024861	A5SS	0.33	50	50	ENSMUST00000107037.8	ENSMUSG00000043372.13	Hexim2	chr11	protein_coding	hexamethylene bis-acetamide inducible 2
chr11	103072995	103076447	+	103072995;103073593	103073468;103076447	ES	0.25	50	50	ENSMUST00000042286.12	ENSMUSG00000055805.16	Fmnl1	chr11	protein_coding	formin-like 1
chr11	103073593;103073859	103073842;103076447	+	103073593	103076447	cassetteExon	0.5	100	100	ENSMUST00000042286.12	ENSMUSG00000055805.16	Fmnl1	chr11	protein_coding	formin-like 1
chr11	103088604;103089059	103088961;103089309	+	103088604	103089309	cassetteExon	0.5	100	100	ENSMUST00000042286.12	ENSMUSG00000055805.16	Fmnl1	chr11	protein_coding	formin-like 1
chr11	103084028	103084277	+	103084028	103084274	A3SS	0.5	50	50	ENSMUST00000042286.12	ENSMUSG00000055805.16	Fmnl1	chr11	protein_coding	formin-like 1
chr11	103071791	103072535	+	103071821	103072535	A5SS	0.5	50	50	ENSMUST00000042286.12	ENSMUSG00000055805.16	Fmnl1	chr11	protein_coding	formin-like 1
chr11	103076164	103076447	+	103073593	103076447	A5SS	0.25	50	50	ENSMUST00000042286.12	ENSMUSG00000055805.16	Fmnl1	chr11	protein_coding	formin-like 1
chr11	103076164	103076447	+	103073859	103076447	A5SS	0.25	50	50	ENSMUST00000218163.2	ENSMUSG00000055805.16	Fmnl1	chr11	protein_coding	formin-like 1
chr11	103072995;103073859	103073468;103076447	+	103072995	103076447	cassetteExon	0.5	100	100	ENSMUST00000126425.8	ENSMUSG00000055805.16	Fmnl1	chr11	protein_coding	formin-like 1
chr11	103076164	103076447	+	103072995	103076447	A5SS	0.25	50	50	ENSMUST00000126425.8	ENSMUSG00000055805.16	Fmnl1	chr11	protein_coding	formin-like 1
chr11	103090648	103091094	-	103090648;103091009	103090889;103091094	ES	0.5	50	50	ENSMUST00000021323.11	ENSMUSG00000020940.14	Efcab15	chr11	protein_coding	EF-hand calcium binding domain 15
chr11	103092588	103099184	-	103092588	103099335	A5SS	0.5	50	50	ENSMUST00000021323.11	ENSMUSG00000020940.14	Efcab15	chr11	protein_coding	EF-hand calcium binding domain 15
chr11	103156224	103158164	-	103133215	103158164	A3SS	0.5	50	50	ENSMUST00000021324.3	ENSMUSG00000020941.8	Map3k14	chr11	protein_coding	mitogen-activated protein kinase kinase kinase 14
chr11	103224117	103224171	-	103224082	103224171	A3SS	0.5	50	50	ENSMUST00000107024.8	ENSMUSG00000034255.18	Arhgap27	chr11	protein_coding	Rho GTPase activating protein 27
chr11	103231230	103235336	-	103231230	103251073	A5SS	0.25	50	50	ENSMUST00000107024.8	ENSMUSG00000034255.18	Arhgap27	chr11	protein_coding	Rho GTPase activating protein 27
chr11	103231230	103247091	-	103231230	103251073	A5SS	0.25	50	50	ENSMUST00000107024.8	ENSMUSG00000034255.18	Arhgap27	chr11	protein_coding	Rho GTPase activating protein 27
chr11	103231230	103247093	-	103231230	103251073	A5SS	0.25	50	50	ENSMUST00000107024.8	ENSMUSG00000034255.18	Arhgap27	chr11	protein_coding	Rho GTPase activating protein 27
chr11	103231230	103247091	-	103231230	103235336	5pMXE	0.25	50	50	ENSMUST00000041385.14	ENSMUSG00000034255.18	Arhgap27	chr11	protein_coding	Rho GTPase activating protein 27
chr11	103231230	103247093	-	103231230	103235336	5pMXE	0.25	50	50	ENSMUST00000041385.14	ENSMUSG00000034255.18	Arhgap27	chr11	protein_coding	Rho GTPase activating protein 27
chr11	103231230	103247093	-	103231230	103247091	A5SS	0.25	50	50	ENSMUST00000136491.3	ENSMUSG00000034255.18	Arhgap27	chr11	protein_coding	Rho GTPase activating protein 27
chr11	103271178	103285514	-	103271178;103278174	103277784;103285514	ES	0.5	50	50	ENSMUST00000041272.10	ENSMUSG00000034247.10	Plekhm1	chr11	protein_coding	pleckstrin homology domain containing, family M (with RUN domain) member 1
chr11	103522217;103522938	103522849;103524726	-	103522217	103524726	cassetteExon	0.5	100	100	ENSMUST00000107014.8	ENSMUSG00000020945.14	Lyzl6	chr11	protein_coding	lysozyme-like 6
chr11	103527769	103529560	-	103527769	103529650	A5SS	0.5	50	50	ENSMUST00000107014.8	ENSMUSG00000020945.14	Lyzl6	chr11	protein_coding	lysozyme-like 6
chr11	103570223	103577408	-	103570223;103574758	103574618;103577408	ES	0.5	50	50	ENSMUST00000021329.14	ENSMUSG00000020946.14	Gosr2	chr11	protein_coding	golgi SNAP receptor complex member 2
chr11	103578459	103588456	-	103578459;103580145	103580081;103588456	ES	0.5	50	50	ENSMUST00000021329.14	ENSMUSG00000020946.14	Gosr2	chr11	protein_coding	golgi SNAP receptor complex member 2
chr11	103821641;103821949	103821902;103844796	-	103821641	103844796	cassetteExon	0.5	100	100	ENSMUST00000103075.11	ENSMUSG00000034187.19	Nsf	chr11	protein_coding	N-ethylmaleimide sensitive fusion protein
chr11	103821641	103828991	-	103821641	103844796	A5SS	0.33	50	50	ENSMUST00000103075.11	ENSMUSG00000034187.19	Nsf	chr11	protein_coding	N-ethylmaleimide sensitive fusion protein
chr11	103821641	103828991	-	103821641	103821902	A5SS&ES	0.33	50	50	ENSMUST00000107009.8	ENSMUSG00000034187.19	Nsf	chr11	protein_coding	N-ethylmaleimide sensitive fusion protein
chr11	103821949	103828991	-	103821949	103844796	A5SS	0.5	50	50	ENSMUST00000107009.8	ENSMUSG00000034187.19	Nsf	chr11	protein_coding	N-ethylmaleimide sensitive fusion protein
chr11	103821641	103828991	-	103821641;103821949	103821902;103828991	ES	0.5	50	50	ENSMUST00000133774.4	ENSMUSG00000034187.19	Nsf	chr11	protein_coding	N-ethylmaleimide sensitive fusion protein
chr11	103858203	103859905	+	103857653	103859905	A5SS	0.5	50	50	ENSMUST00000057921.10	ENSMUSG00000062421.14	Arf2	chr11	protein_coding	ADP-ribosylation factor 2
chr11	103870583	103872520	+	103863889	103872520	A5SS	0.5	50	50	ENSMUST00000057921.10	ENSMUSG00000062421.14	Arf2	chr11	protein_coding	ADP-ribosylation factor 2
chr11	104173306;104178035	104177949;104185685	+	104173306	104185685	cassetteExon	0.5	100	100	ENSMUST00000106992.10	ENSMUSG00000018411.18	Mapt	chr11	protein_coding	microtubule-associated protein tau
chr11	104173306;104178035	104177949;104193187	+	104173306;104185750	104185685;104193187	MXE	0.5	100	100	ENSMUST00000106992.10	ENSMUSG00000018411.18	Mapt	chr11	protein_coding	microtubule-associated protein tau
chr11	104193236;104196235	104196038;104197452	+	104193236	104197452	cassetteExon	0.5	100	100	ENSMUST00000106992.10	ENSMUSG00000018411.18	Mapt	chr11	protein_coding	microtubule-associated protein tau
chr11	104193236;104196235	104196139;104197452	+	104193236	104197452	cassetteExon	0.5	100	100	ENSMUST00000106992.10	ENSMUSG00000018411.18	Mapt	chr11	protein_coding	microtubule-associated protein tau
chr11	104197584;104198760	104198707;104201095	+	104197584	104201095	cassetteExon	0.5	100	100	ENSMUST00000106992.10	ENSMUSG00000018411.18	Mapt	chr11	protein_coding	microtubule-associated protein tau
chr11	104209075;104211985	104211889;104212177	+	104209075	104212177	cassetteExon	0.5	100	100	ENSMUST00000106992.10	ENSMUSG00000018411.18	Mapt	chr11	protein_coding	microtubule-associated protein tau
chr11	104185750	104189324	+	104185750	104193187	A3SS	0.33	50	50	ENSMUST00000106992.10	ENSMUSG00000018411.18	Mapt	chr11	protein_coding	microtubule-associated protein tau
chr11	104185750	104189372	+	104185750	104193187	A3SS	0.33	50	50	ENSMUST00000106992.10	ENSMUSG00000018411.18	Mapt	chr11	protein_coding	microtubule-associated protein tau
chr11	104180820	104185685	+	104173306	104185685	A5SS	0.33	50	50	ENSMUST00000106992.10	ENSMUSG00000018411.18	Mapt	chr11	protein_coding	microtubule-associated protein tau
chr11	104190082	104193187	+	104185750	104193187	A5SS	0.33	50	50	ENSMUST00000106992.10	ENSMUSG00000018411.18	Mapt	chr11	protein_coding	microtubule-associated protein tau
chr11	104193236	104196139	+	104193236	104196038	A3SS	0.33	50	50	ENSMUST00000145227.8	ENSMUSG00000018411.18	Mapt	chr11	protein_coding	microtubule-associated protein tau
chr11	104178035;104185750	104185685;104193187	+	104178035	104193187	cassetteExon	0.5	100	100	ENSMUST00000132977.8	ENSMUSG00000018411.18	Mapt	chr11	protein_coding	microtubule-associated protein tau
chr11	104178035	104180734	+	104178035	104193187	A3SS	0.33	50	50	ENSMUST00000132977.8	ENSMUSG00000018411.18	Mapt	chr11	protein_coding	microtubule-associated protein tau
chr11	104190082	104193187	+	104178035	104193187	A5SS	0.33	50	50	ENSMUST00000132977.8	ENSMUSG00000018411.18	Mapt	chr11	protein_coding	microtubule-associated protein tau
chr11	104178035	104193187	+	104178035	104185685	3pMXE	0.33	50	50	ENSMUST00000132245.8	ENSMUSG00000018411.18	Mapt	chr11	protein_coding	microtubule-associated protein tau
chr11	104178035;104180820	104180734;104185685	+	104178035	104185685	cassetteExon	0.5	100	100	ENSMUST00000132245.8	ENSMUSG00000018411.18	Mapt	chr11	protein_coding	microtubule-associated protein tau
chr11	104185750	104193187	+	104185750;104190082	104189372;104193187	ES	0.33	50	50	ENSMUST00000106988.8	ENSMUSG00000018411.18	Mapt	chr11	protein_coding	microtubule-associated protein tau
chr11	104185750	104189324	+	104185750	104189372	A3SS	0.33	50	50	ENSMUST00000106988.8	ENSMUSG00000018411.18	Mapt	chr11	protein_coding	microtubule-associated protein tau
chr11	104185750	104193187	+	104185750;104190082	104189324;104193187	ES	0.33	50	50	ENSMUST00000106989.3	ENSMUSG00000018411.18	Mapt	chr11	protein_coding	microtubule-associated protein tau
chr11	104316119	104358465	-	104316119	104332551	5pMXE	0.25	50	50	ENSMUST00000106977.8	ENSMUSG00000018412.17	Kansl1	chr11	protein_coding	KAT8 regulatory NSL complex subunit 1
chr11	104233337;104233873	104233685;104234317	-	104233337	104234317	cassetteExon	0.5	100	100	ENSMUST00000106977.8	ENSMUSG00000018412.17	Kansl1	chr11	protein_coding	KAT8 regulatory NSL complex subunit 1
chr11	104229073	104232031	-	104229073	104233189	A5SS	0.5	50	50	ENSMUST00000106977.8	ENSMUSG00000018412.17	Kansl1	chr11	protein_coding	KAT8 regulatory NSL complex subunit 1
chr11	104316119	104317250	-	104316119	104332551	A5SS	0.25	50	50	ENSMUST00000106977.8	ENSMUSG00000018412.17	Kansl1	chr11	protein_coding	KAT8 regulatory NSL complex subunit 1
chr11	104316119	104332123	-	104316119	104332551	A5SS	0.25	50	50	ENSMUST00000106977.8	ENSMUSG00000018412.17	Kansl1	chr11	protein_coding	KAT8 regulatory NSL complex subunit 1
chr11	104316119;104317294	104317250;104358465	-	104316119	104358465	cassetteExon	0.5	100	100	ENSMUST00000018556.11	ENSMUSG00000018412.17	Kansl1	chr11	protein_coding	KAT8 regulatory NSL complex subunit 1
chr11	104316119	104332123	-	104316119	104358465	A5SS	0.25	50	50	ENSMUST00000018556.11	ENSMUSG00000018412.17	Kansl1	chr11	protein_coding	KAT8 regulatory NSL complex subunit 1
chr11	104316119	104317250	-	104316119	104332123	A5SS	0.25	50	50	ENSMUST00000106971.2	ENSMUSG00000018412.17	Kansl1	chr11	protein_coding	KAT8 regulatory NSL complex subunit 1
chr11	104411662	104413549	-	104411662;104412414	104412207;104413549	ES	0.5	50	50	ENSMUST00000093923.9	ENSMUSG00000020687.14	Cdc27	chr11	protein_coding	cell division cycle 27
chr11	104417010	104417689	-	104416992	104417689	A3SS	0.5	50	50	ENSMUST00000093923.9	ENSMUSG00000020687.14	Cdc27	chr11	protein_coding	cell division cycle 27
chr11	104427496	104441304	-	104427496	104441189	A5SS	0.5	50	50	ENSMUST00000093923.9	ENSMUSG00000020687.14	Cdc27	chr11	protein_coding	cell division cycle 27
chr11	104476597	104486190	+	104476597	104477911	3pMXE	0.5	50	50	ENSMUST00000018800.9	ENSMUSG00000061086.13	Myl4	chr11	protein_coding	myosin, light polypeptide 4
chr11	104466367	104468247	+	104452401	104468247	A5SS	0.33	50	50	ENSMUST00000018800.9	ENSMUSG00000061086.13	Myl4	chr11	protein_coding	myosin, light polypeptide 4
chr11	104467993	104468247	+	104452401	104468247	A5SS	0.33	50	50	ENSMUST00000018800.9	ENSMUSG00000061086.13	Myl4	chr11	protein_coding	myosin, light polypeptide 4
chr11	104471301	104474804	+	104471255	104474804	A5SS	0.5	50	50	ENSMUST00000018800.9	ENSMUSG00000061086.13	Myl4	chr11	protein_coding	myosin, light polypeptide 4
chr11	104467993	104468247	+	104466367	104468247	A5SS	0.33	50	50	ENSMUST00000153761.8	ENSMUSG00000061086.13	Myl4	chr11	protein_coding	myosin, light polypeptide 4
chr11	104528331	104528649	+	104528040	104528649	A5SS	0.5	50	50	ENSMUST00000021028.5	ENSMUSG00000020689.5	Itgb3	chr11	protein_coding	integrin beta 3
chr11	104605569	104615297	+	104605569;104612377	104611094;104615297	ES	0.33	50	50	ENSMUST00000148007.3	ENSMUSG00000040838.11	Gm11639	chr11	protein_coding	predicted gene 11639
chr11	104591518	104595126	+	104591518	104601407	A3SS	0.5	50	50	ENSMUST00000148007.3	ENSMUSG00000040838.11	Gm11639	chr11	protein_coding	predicted gene 11639
chr11	104597820	104601407	+	104591518	104601407	A5SS	0.5	50	50	ENSMUST00000148007.3	ENSMUSG00000040838.11	Gm11639	chr11	protein_coding	predicted gene 11639
chr11	104612221	104615297	+	104612377	104615297	A5SS	0.33	50	50	ENSMUST00000148007.3	ENSMUSG00000040838.11	Gm11639	chr11	protein_coding	predicted gene 11639
chr11	104634447	104637035	+	104630178	104637035	A5SS	0.5	50	50	ENSMUST00000148007.3	ENSMUSG00000040838.11	Gm11639	chr11	protein_coding	predicted gene 11639
chr11	104605569	104615297	+	104605569;104612221	104611094;104615297	ES	0.33	50	50	ENSMUST00000212287.2	ENSMUSG00000040838.11	Gm11639	chr11	protein_coding	predicted gene 11639
chr11	104957738	104958127	+	104957233	104958127	A5SS	0.5	50	50	ENSMUST00000212287.2	ENSMUSG00000040838.11	Gm11639	chr11	protein_coding	predicted gene 11639
chr11	104983329	104984394	+	104979918	104984394	A5SS	0.5	50	50	ENSMUST00000212287.2	ENSMUSG00000040838.11	Gm11639	chr11	protein_coding	predicted gene 11639
chr11	105003698	105007894	+	105002738	105007894	A5SS	0.5	50	50	ENSMUST00000212287.2	ENSMUSG00000040838.11	Gm11639	chr11	protein_coding	predicted gene 11639
chr11	104605569	104611094	+	104605569	104615297	A3SS	0.5	50	50	ENSMUST00000175713.2	ENSMUSG00000040838.11	Gm11639	chr11	protein_coding	predicted gene 11639
chr11	104612221	104615297	+	104605569	104615297	A5SS	0.33	50	50	ENSMUST00000175713.2	ENSMUSG00000040838.11	Gm11639	chr11	protein_coding	predicted gene 11639
chr11	104612377	104615297	+	104605569	104615297	A5SS	0.33	50	50	ENSMUST00000175713.2	ENSMUSG00000040838.11	Gm11639	chr11	protein_coding	predicted gene 11639
chr11	104971469	104974692	+	104971469	104979865	A3SS	0.5	50	50	ENSMUST00000136876.8	ENSMUSG00000020690.13	Efcab3	chr11	protein_coding	EF-hand calcium binding domain 3
chr11	104977899	104979865	+	104971469	104979865	A5SS	0.5	50	50	ENSMUST00000136876.8	ENSMUSG00000020690.13	Efcab3	chr11	protein_coding	EF-hand calcium binding domain 3
chr11	105028610	105029387	+	105028610	105030387	A3SS	0.5	50	50	ENSMUST00000021030.8	ENSMUSG00000020691.14	Mettl2	chr11	protein_coding	methyltransferase like 2
chr11	105018267	105019567	+	105017693	105019567	A5SS	0.5	50	50	ENSMUST00000021030.8	ENSMUSG00000020691.14	Mettl2	chr11	protein_coding	methyltransferase like 2
chr11	105099747	105112012	+	105099747;105100663	105100620;105112012	ES	0.33	50	50	ENSMUST00000106939.9	ENSMUSG00000020694.18	Tlk2	chr11	protein_coding	tousled-like kinase 2 (Arabidopsis)
chr11	105112179	105132395	+	105112179;105131282	105131187;105132395	ES	0.5	50	50	ENSMUST00000106939.9	ENSMUSG00000020694.18	Tlk2	chr11	protein_coding	tousled-like kinase 2 (Arabidopsis)
chr11	105132487	105138285	+	105132487;105137710	105137600;105138285	ES	0.5	50	50	ENSMUST00000106939.9	ENSMUSG00000020694.18	Tlk2	chr11	protein_coding	tousled-like kinase 2 (Arabidopsis)
chr11	105100663;105101466	105101371;105112012	+	105100663	105112012	cassetteExon	0.5	100	100	ENSMUST00000106939.9	ENSMUSG00000020694.18	Tlk2	chr11	protein_coding	tousled-like kinase 2 (Arabidopsis)
chr11	105071712	105075038	+	105071412	105075038	A5SS	0.25	50	50	ENSMUST00000106939.9	ENSMUSG00000020694.18	Tlk2	chr11	protein_coding	tousled-like kinase 2 (Arabidopsis)
chr11	105072877	105075038	+	105071412	105075038	A5SS	0.25	50	50	ENSMUST00000106939.9	ENSMUSG00000020694.18	Tlk2	chr11	protein_coding	tousled-like kinase 2 (Arabidopsis)
chr11	105073184	105075038	+	105071412	105075038	A5SS	0.25	50	50	ENSMUST00000106939.9	ENSMUSG00000020694.18	Tlk2	chr11	protein_coding	tousled-like kinase 2 (Arabidopsis)
chr11	105144062	105145792	+	105144183	105145792	A5SS&ES	0.5	50	50	ENSMUST00000106939.9	ENSMUSG00000020694.18	Tlk2	chr11	protein_coding	tousled-like kinase 2 (Arabidopsis)
chr11	105099747	105112012	+	105099747	105100620	3pMXE	0.5	50	50	ENSMUST00000126054.8	ENSMUSG00000020694.18	Tlk2	chr11	protein_coding	tousled-like kinase 2 (Arabidopsis)
chr11	105072877	105075038	+	105071712	105075038	A5SS	0.25	50	50	ENSMUST00000126054.8	ENSMUSG00000020694.18	Tlk2	chr11	protein_coding	tousled-like kinase 2 (Arabidopsis)
chr11	105073184	105075038	+	105071712	105075038	A5SS	0.25	50	50	ENSMUST00000126054.8	ENSMUSG00000020694.18	Tlk2	chr11	protein_coding	tousled-like kinase 2 (Arabidopsis)
chr11	105073184	105075038	+	105072877	105075038	A5SS	0.25	50	50	ENSMUST00000106941.9	ENSMUSG00000020694.18	Tlk2	chr11	protein_coding	tousled-like kinase 2 (Arabidopsis)
chr11	105101466	105112012	+	105099747	105112012	A5SS	0.33	50	50	ENSMUST00000126175.8	ENSMUSG00000020694.18	Tlk2	chr11	protein_coding	tousled-like kinase 2 (Arabidopsis)
chr11	105100663	105112012	+	105100663	105101371	3pMXE	0.5	50	50	ENSMUST00000149459.8	ENSMUSG00000020694.18	Tlk2	chr11	protein_coding	tousled-like kinase 2 (Arabidopsis)
chr11	105112179	105132395	+	105112179	105131187	3pMXE	0.5	50	50	ENSMUST00000123050.2	ENSMUSG00000020694.18	Tlk2	chr11	protein_coding	tousled-like kinase 2 (Arabidopsis)
chr11	105132487	105138285	+	105137710	105138285	5pMXE	0.5	50	50	ENSMUST00000134419.2	ENSMUSG00000020694.18	Tlk2	chr11	protein_coding	tousled-like kinase 2 (Arabidopsis)
chr11	105216729	105218798	+	105216729	105217548	3pMXE	0.5	50	50	ENSMUST00000126931.2	ENSMUSG00000020695.15	Mrc2	chr11	protein_coding	mannose receptor, C type 2
chr11	105345171	105347300	-	105345171	105345954	5pMXE	0.5	50	50	ENSMUST00000138977.8	ENSMUSG00000078627.10	Marchf10	chr11	protein_coding	membrane associated ring-CH-type finger 10
chr11	105287921;105293026	105292696;105299469	-	105287921	105299469	cassetteExon	0.5	100	100	ENSMUST00000138977.8	ENSMUSG00000078627.10	Marchf10	chr11	protein_coding	membrane associated ring-CH-type finger 10
chr11	105287554	105287775	-	105281757	105287775	A3SS	0.5	50	50	ENSMUST00000138977.8	ENSMUSG00000078627.10	Marchf10	chr11	protein_coding	membrane associated ring-CH-type finger 10
chr11	105287921	105299469	-	105293026	105299469	3pMXE	0.5	50	50	ENSMUST00000100332.4	ENSMUSG00000078627.10	Marchf10	chr11	protein_coding	membrane associated ring-CH-type finger 10
chr11	105604390;105649858	105649748;105667632	+	105604390	105667632	cassetteExon	0.5	100	100	ENSMUST00000168598.8	ENSMUSG00000053580.17	Tanc2	chr11	protein_coding	tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
chr11	105604390	105605013	+	105604390	105667632	A3SS	0.33	50	50	ENSMUST00000168598.8	ENSMUSG00000053580.17	Tanc2	chr11	protein_coding	tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
chr11	105604279	105667632	+	105604390	105667632	A5SS	0.33	50	50	ENSMUST00000168598.8	ENSMUSG00000053580.17	Tanc2	chr11	protein_coding	tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
chr11	105807886	105812574	+	105807886;105810877	105810777;105812574	ES	0.5	50	50	ENSMUST00000100330.10	ENSMUSG00000053580.17	Tanc2	chr11	protein_coding	tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
chr11	105804315;105804896	105804867;105805718	+	105804315	105805718	cassetteExon	0.5	100	100	ENSMUST00000100330.10	ENSMUSG00000053580.17	Tanc2	chr11	protein_coding	tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
chr11	105649858	105667632	+	105604279	105667632	A5SS	0.33	50	50	ENSMUST00000100330.10	ENSMUSG00000053580.17	Tanc2	chr11	protein_coding	tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
chr11	105604390	105605013	+	105604390	105649748	A3SS	0.33	50	50	ENSMUST00000207807.2	ENSMUSG00000053580.17	Tanc2	chr11	protein_coding	tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
chr11	105828666	105843873	-	105828666	105834937	5pMXE	0.33	50	50	ENSMUST00000019734.11	ENSMUSG00000019590.17	Cyb561	chr11	protein_coding	cytochrome b-561
chr11	105828666;105830990	105830926;105834937	-	105828666	105834937	cassetteExon	0.5	100	100	ENSMUST00000019734.11	ENSMUSG00000019590.17	Cyb561	chr11	protein_coding	cytochrome b-561
chr11	105828666;105831204	105830926;105834937	-	105828666	105834937	cassetteExon	0.5	100	100	ENSMUST00000019734.11	ENSMUSG00000019590.17	Cyb561	chr11	protein_coding	cytochrome b-561
chr11	105826779	105827008	-	105826735	105827008	A3SS	0.5	50	50	ENSMUST00000019734.11	ENSMUSG00000019590.17	Cyb561	chr11	protein_coding	cytochrome b-561
chr11	105827111	105827381	-	105826393	105827381	A3SS	0.5	50	50	ENSMUST00000183493.8	ENSMUSG00000019590.17	Cyb561	chr11	protein_coding	cytochrome b-561
chr11	105826393	105826578	-	105826393	105827381	A5SS	0.5	50	50	ENSMUST00000183493.8	ENSMUSG00000019590.17	Cyb561	chr11	protein_coding	cytochrome b-561
chr11	105828666	105830926	-	105828666	105843873	A5SS	0.33	50	50	ENSMUST00000143251.8	ENSMUSG00000019590.17	Cyb561	chr11	protein_coding	cytochrome b-561
chr11	105831204	105834937	-	105830990	105834937	A3SS	0.33	50	50	ENSMUST00000184269.3	ENSMUSG00000019590.17	Cyb561	chr11	protein_coding	cytochrome b-561
chr11	105866229	105866362	+	105865704	105866362	A5SS	0.5	50	50	ENSMUST00000001963.14	ENSMUSG00000020681.15	Ace	chr11	protein_coding	angiotensin I converting enzyme (peptidyl-dipeptidase A) 1
chr11	105867841	105870307	+	105870139	105870307	A5SS&ES	0.5	50	50	ENSMUST00000001963.14	ENSMUSG00000020681.15	Ace	chr11	protein_coding	angiotensin I converting enzyme (peptidyl-dipeptidase A) 1
chr11	105914744	105916514	+	105914744	105916620	A3SS	0.5	50	50	ENSMUST00000106903.8	ENSMUSG00000001901.16	Kcnh6	chr11	protein_coding	potassium voltage-gated channel, subfamily H (eag-related), member 6
chr11	105904624	105904954	+	105900039	105904954	A5SS	0.5	50	50	ENSMUST00000106903.8	ENSMUSG00000001901.16	Kcnh6	chr11	protein_coding	potassium voltage-gated channel, subfamily H (eag-related), member 6
chr11	106043220	106044778	+	106043220	106044792	A3SS	0.5	50	50	ENSMUST00000002044.10	ENSMUSG00000020700.12	Map3k3	chr11	protein_coding	mitogen-activated protein kinase kinase kinase 3
chr11	106050268	106050639	-	106050268	106050877	A5SS	0.5	50	50	ENSMUST00000045923.10	ENSMUSG00000040699.14	Limd2	chr11	protein_coding	LIM domain containing 2
chr11	106059306;106061903	106061780;106061982	-	106059306	106061982	cassetteExon	0.5	100	100	ENSMUST00000122989.2	ENSMUSG00000069631.15	Strada	chr11	protein_coding	STE20-related kinase adaptor alpha
chr11	106091842	106092837	-	106078006	106092837	A3SS	0.5	50	50	ENSMUST00000122989.2	ENSMUSG00000069631.15	Strada	chr11	protein_coding	STE20-related kinase adaptor alpha
chr11	106064607	106077951	-	106064607	106071781	A5SS&ES	0.5	50	50	ENSMUST00000122989.2	ENSMUSG00000069631.15	Strada	chr11	protein_coding	STE20-related kinase adaptor alpha
chr11	106078006	106078634	-	106078006	106092837	A5SS	0.33	50	50	ENSMUST00000122989.2	ENSMUSG00000069631.15	Strada	chr11	protein_coding	STE20-related kinase adaptor alpha
chr11	106078006	106084292	-	106078006	106092837	A5SS	0.33	50	50	ENSMUST00000122989.2	ENSMUSG00000069631.15	Strada	chr11	protein_coding	STE20-related kinase adaptor alpha
chr11	106078006;106078747	106078634;106084292	-	106078006	106084292	cassetteExon	0.5	100	100	ENSMUST00000007444.14	ENSMUSG00000069631.15	Strada	chr11	protein_coding	STE20-related kinase adaptor alpha
chr11	106094449	106095212	-	106094449	106095747	A5SS	0.5	50	50	ENSMUST00000002043.10	ENSMUSG00000078622.9	Ccdc47	chr11	protein_coding	coiled-coil domain containing 47
chr11	106156826	106157363	-	106156809	106157363	A3SS	0.5	50	50	ENSMUST00000106843.8	ENSMUSG00000078619.11	Smarcd2	chr11	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
chr11	106167700	106172729	+	106167619	106172729	A5SS	0.5	50	50	ENSMUST00000142472.8	ENSMUSG00000020712.12	Tcam1	chr11	protein_coding	testicular cell adhesion molecule 1
chr11	106176467	106177202	+	106176632	106177202	A5SS	0.5	50	50	ENSMUST00000142472.8	ENSMUSG00000020712.12	Tcam1	chr11	protein_coding	testicular cell adhesion molecule 1
chr11	106266341	106267453	+	106266341;106267300	106267080;106267453	ES	0.5	50	50	ENSMUST00000009354.10	ENSMUSG00000009210.11	Prr29	chr11	protein_coding	proline rich 29
chr11	106265743	106266235	+	106265266	106266235	A5SS	0.33	50	50	ENSMUST00000009354.10	ENSMUSG00000009210.11	Prr29	chr11	protein_coding	proline rich 29
chr11	106266074	106266235	+	106265266	106266235	A5SS	0.33	50	50	ENSMUST00000009354.10	ENSMUSG00000009210.11	Prr29	chr11	protein_coding	proline rich 29
chr11	106267298	106267719	+	106267523	106267719	A5SS&ES	0.5	50	50	ENSMUST00000009354.10	ENSMUSG00000009210.11	Prr29	chr11	protein_coding	proline rich 29
chr11	106265743	106266235	+	106265743;106266074	106265999;106266235	ES	0.5	50	50	ENSMUST00000106816.8	ENSMUSG00000009210.11	Prr29	chr11	protein_coding	proline rich 29
chr11	106265743	106266020	+	106265743	106265999	A3SS	0.33	50	50	ENSMUST00000106816.8	ENSMUSG00000009210.11	Prr29	chr11	protein_coding	proline rich 29
chr11	106266341;106267298	106267080;106267719	+	106266341;106267523	106267453;106267719	MXE	0.5	100	100	ENSMUST00000188561.7	ENSMUSG00000009210.11	Prr29	chr11	protein_coding	proline rich 29
chr11	106265743;106266074	106266020;106266235	+	106265743	106266235	cassetteExon	0.5	100	100	ENSMUST00000190795.7	ENSMUSG00000009210.11	Prr29	chr11	protein_coding	proline rich 29
chr11	106271765;106272250	106272143;106273256	-	106271765	106273256	cassetteExon	0.5	100	100	ENSMUST00000001055.15	ENSMUSG00000001029.16	Icam2	chr11	protein_coding	intercellular adhesion molecule 2
chr11	106273372	106273696	-	106273372	106278873	A5SS	0.5	50	50	ENSMUST00000106813.9	ENSMUSG00000001029.16	Icam2	chr11	protein_coding	intercellular adhesion molecule 2
chr11	106271765	106273256	-	106272250	106273256	3pMXE	0.5	50	50	ENSMUST00000106809.3	ENSMUSG00000001029.16	Icam2	chr11	protein_coding	intercellular adhesion molecule 2
chr11	106325813	106349734	-	106325813;106327949	106327916;106349734	ES	0.5	50	50	ENSMUST00000001059.9	ENSMUSG00000020715.10	Ern1	chr11	protein_coding	endoplasmic reticulum (ER) to nucleus signalling 1
chr11	106305295	106325749	-	106305295	106309650	A5SS&ES	0.5	50	50	ENSMUST00000001059.9	ENSMUSG00000020715.10	Ern1	chr11	protein_coding	endoplasmic reticulum (ER) to nucleus signalling 1
chr11	106459453	106504041	-	106459453	106503684	5pMXE	0.33	50	50	ENSMUST00000042780.14	ENSMUSG00000040548.17	Tex2	chr11	protein_coding	testis expressed gene 2
chr11	106404532	106410708	-	106404538	106410708	A3SS	0.5	50	50	ENSMUST00000042780.14	ENSMUSG00000040548.17	Tex2	chr11	protein_coding	testis expressed gene 2
chr11	106459453	106469861	-	106459453	106503684	A5SS	0.33	50	50	ENSMUST00000042780.14	ENSMUSG00000040548.17	Tex2	chr11	protein_coding	testis expressed gene 2
chr11	106459453	106504041	-	106459453	106469861	5pMXE	0.33	50	50	ENSMUST00000103070.3	ENSMUSG00000040548.17	Tex2	chr11	protein_coding	testis expressed gene 2
chr11	106586855	106590418	-	106586855;106588180	106587878;106590418	ES	0.5	50	50	ENSMUST00000103069.10	ENSMUSG00000020717.20	Pecam1	chr11	protein_coding	platelet/endothelial cell adhesion molecule 1
chr11	106545988;106562624	106562568;106570375	-	106545988	106570375	cassetteExon	0.5	100	100	ENSMUST00000103069.10	ENSMUSG00000020717.20	Pecam1	chr11	protein_coding	platelet/endothelial cell adhesion molecule 1
chr11	106545988	106552828	-	106545988	106570375	A5SS	0.33	50	50	ENSMUST00000103069.10	ENSMUSG00000020717.20	Pecam1	chr11	protein_coding	platelet/endothelial cell adhesion molecule 1
chr11	106545988;106552850	106552828;106562568	-	106545988	106562568	cassetteExon	0.5	100	100	ENSMUST00000080853.11	ENSMUSG00000020717.20	Pecam1	chr11	protein_coding	platelet/endothelial cell adhesion molecule 1
chr11	106545988	106562568	-	106552850	106562568	3pMXE	0.5	50	50	ENSMUST00000068021.9	ENSMUSG00000020717.20	Pecam1	chr11	protein_coding	platelet/endothelial cell adhesion molecule 1
chr11	106645877	106654682	+	106645877;106652122	106652009;106654682	ES	0.25	50	50	ENSMUST00000147326.9	ENSMUSG00000040528.16	Milr1	chr11	protein_coding	mast cell immunoglobulin like receptor 1
chr11	106645877;106648635	106648529;106654682	+	106645877;106652122	106652009;106654682	MXE	0.5	100	100	ENSMUST00000147326.9	ENSMUSG00000040528.16	Milr1	chr11	protein_coding	mast cell immunoglobulin like receptor 1
chr11	106645877;106648640	106648529;106652009	+	106645877	106652009	cassetteExon	0.5	100	100	ENSMUST00000147326.9	ENSMUSG00000040528.16	Milr1	chr11	protein_coding	mast cell immunoglobulin like receptor 1
chr11	106652122;106652856	106652447;106654682	+	106652122	106654682	cassetteExon	0.5	100	100	ENSMUST00000147326.9	ENSMUSG00000040528.16	Milr1	chr11	protein_coding	mast cell immunoglobulin like receptor 1
chr11	106645877	106652012	+	106645877	106652009	A3SS	0.25	50	50	ENSMUST00000147326.9	ENSMUSG00000040528.16	Milr1	chr11	protein_coding	mast cell immunoglobulin like receptor 1
chr11	106657849	106659228	+	106657873	106659228	A5SS	0.5	50	50	ENSMUST00000147326.9	ENSMUSG00000040528.16	Milr1	chr11	protein_coding	mast cell immunoglobulin like receptor 1
chr11	106645877	106654682	+	106645877;106648635	106648529;106654682	ES	0.25	50	50	ENSMUST00000182896.8	ENSMUSG00000040528.16	Milr1	chr11	protein_coding	mast cell immunoglobulin like receptor 1
chr11	106645877;106652122	106652012;106654682	+	106645877;106648635	106648529;106654682	MXE	0.5	100	100	ENSMUST00000182896.8	ENSMUSG00000040528.16	Milr1	chr11	protein_coding	mast cell immunoglobulin like receptor 1
chr11	106652856	106654682	+	106648635	106654682	A5SS	0.25	50	50	ENSMUST00000182896.8	ENSMUSG00000040528.16	Milr1	chr11	protein_coding	mast cell immunoglobulin like receptor 1
chr11	106645877;106652122	106652012;106654682	+	106645877	106654682	cassetteExon	0.5	100	100	ENSMUST00000182908.8	ENSMUSG00000040528.16	Milr1	chr11	protein_coding	mast cell immunoglobulin like receptor 1
chr11	106652856	106654682	+	106645877	106654682	A5SS	0.25	50	50	ENSMUST00000182908.8	ENSMUSG00000040528.16	Milr1	chr11	protein_coding	mast cell immunoglobulin like receptor 1
chr11	106645877	106652012	+	106645877	106648529	A3SS&ES	0.25	50	50	ENSMUST00000182023.2	ENSMUSG00000040528.16	Milr1	chr11	protein_coding	mast cell immunoglobulin like receptor 1
chr11	106660421	106663478	-	106659297	106663478	A3SS	0.5	50	50	ENSMUST00000021060.6	ENSMUSG00000020718.13	Polg2	chr11	protein_coding	polymerase (DNA directed), gamma 2, accessory subunit
chr11	106664291	106664423	-	106664291	106664421	A5SS	0.5	50	50	ENSMUST00000021060.6	ENSMUSG00000020718.13	Polg2	chr11	protein_coding	polymerase (DNA directed), gamma 2, accessory subunit
chr11	106668387	106669543	-	106668387	106669785	A5SS	0.33	50	50	ENSMUST00000021060.6	ENSMUSG00000020718.13	Polg2	chr11	protein_coding	polymerase (DNA directed), gamma 2, accessory subunit
chr11	106668387	106669910	-	106668387	106669785	A5SS	0.33	50	50	ENSMUST00000021060.6	ENSMUSG00000020718.13	Polg2	chr11	protein_coding	polymerase (DNA directed), gamma 2, accessory subunit
chr11	106668387	106669910	-	106668387	106669543	A5SS	0.33	50	50	ENSMUST00000127061.8	ENSMUSG00000020718.13	Polg2	chr11	protein_coding	polymerase (DNA directed), gamma 2, accessory subunit
chr11	106668387;106669633	106669543;106669910	-	106668387	106669910	cassetteExon	0.5	100	100	ENSMUST00000155107.8	ENSMUSG00000020718.13	Polg2	chr11	protein_coding	polymerase (DNA directed), gamma 2, accessory subunit
chr11	106673510	106677735	-	106677370	106677735	A3SS&ES	0.5	50	50	ENSMUST00000021062.12	ENSMUSG00000020719.15	Ddx5	chr11	protein_coding	DEAD box helicase 5
chr11	106673519	106674257	-	106673519	106674785	A5SS	0.5	50	50	ENSMUST00000021062.12	ENSMUSG00000020719.15	Ddx5	chr11	protein_coding	DEAD box helicase 5
chr11	106679285	106679525	-	106679285	106679842	A5SS	0.5	50	50	ENSMUST00000129585.8	ENSMUSG00000020719.15	Ddx5	chr11	protein_coding	DEAD box helicase 5
chr11	106692404;106695947	106695819;106697062	+	106692404	106697062	cassetteExon	0.5	100	100	ENSMUST00000103068.10	ENSMUSG00000018372.14	Cep95	chr11	protein_coding	centrosomal protein 95
chr11	106747090	106755538	-	106747090;106750622	106750538;106755538	ES	0.5	50	50	ENSMUST00000103067.10	ENSMUSG00000018363.17	Smurf2	chr11	protein_coding	SMAD specific E3 ubiquitin protein ligase 2
chr11	106759494;106759934	106759823;106762328	-	106759494	106762328	cassetteExon	0.5	100	100	ENSMUST00000103067.10	ENSMUSG00000018363.17	Smurf2	chr11	protein_coding	SMAD specific E3 ubiquitin protein ligase 2
chr11	106762436;106766765	106766727;106811007	-	106762436	106811007	cassetteExon	0.5	100	100	ENSMUST00000103067.10	ENSMUSG00000018363.17	Smurf2	chr11	protein_coding	SMAD specific E3 ubiquitin protein ligase 2
chr11	106882952;106883517	106883429;106887335	-	106882952	106887335	cassetteExon	0.5	100	100	ENSMUST00000145331.8	ENSMUSG00000018362.15	Kpna2	chr11	protein_coding	karyopherin (importin) alpha 2
chr11	106888161	106890185	-	106888140	106890185	A3SS	0.33	50	50	ENSMUST00000145331.8	ENSMUSG00000018362.15	Kpna2	chr11	protein_coding	karyopherin (importin) alpha 2
chr11	106889064	106890185	-	106888140	106890185	A3SS	0.33	50	50	ENSMUST00000145331.8	ENSMUSG00000018362.15	Kpna2	chr11	protein_coding	karyopherin (importin) alpha 2
chr11	106888161;106889064	106888939;106890185	-	106888161	106890185	cassetteExon	0.5	100	100	ENSMUST00000018506.13	ENSMUSG00000018362.15	Kpna2	chr11	protein_coding	karyopherin (importin) alpha 2
chr11	106888161	106889189	-	106888161	106890185	A5SS	0.25	50	50	ENSMUST00000018506.13	ENSMUSG00000018362.15	Kpna2	chr11	protein_coding	karyopherin (importin) alpha 2
chr11	106888161	106889572	-	106888161	106890185	A5SS	0.25	50	50	ENSMUST00000018506.13	ENSMUSG00000018362.15	Kpna2	chr11	protein_coding	karyopherin (importin) alpha 2
chr11	106882952	106887335	-	106882952	106883429	5pMXE	0.5	50	50	ENSMUST00000156495.2	ENSMUSG00000018362.15	Kpna2	chr11	protein_coding	karyopherin (importin) alpha 2
chr11	106888161	106889572	-	106888161	106889189	5pMXE	0.25	50	50	ENSMUST00000124541.8	ENSMUSG00000018362.15	Kpna2	chr11	protein_coding	karyopherin (importin) alpha 2
chr11	106888161	106888939	-	106888161	106889189	A5SS	0.25	50	50	ENSMUST00000124541.8	ENSMUSG00000018362.15	Kpna2	chr11	protein_coding	karyopherin (importin) alpha 2
chr11	106888161	106888939	-	106888161	106889572	A5SS	0.25	50	50	ENSMUST00000140362.8	ENSMUSG00000018362.15	Kpna2	chr11	protein_coding	karyopherin (importin) alpha 2
chr11	106919094	106919189	+	106919094	106919192	A3SS	0.5	50	50	ENSMUST00000140447.4	ENSMUSG00000078607.7	1810010H24Rik	chr11	protein_coding	RIKEN cDNA 1810010H24 gene
chr11	106934651;106935491	106935318;106937826	-	106934651	106937826	cassetteExon	0.5	100	100	ENSMUST00000057892.15	ENSMUSG00000040481.18	Bptf	chr11	protein_coding	bromodomain PHD finger transcription factor
chr11	106952661;106953037	106952876;106953362	-	106952661	106953362	cassetteExon	0.5	100	100	ENSMUST00000057892.15	ENSMUSG00000040481.18	Bptf	chr11	protein_coding	bromodomain PHD finger transcription factor
chr11	106973526;106977723	106977538;106986542	-	106973526	106986542	cassetteExon	0.5	100	100	ENSMUST00000057892.15	ENSMUSG00000040481.18	Bptf	chr11	protein_coding	bromodomain PHD finger transcription factor
chr11	106927416	106931052	-	106926665	106931052	A3SS	0.5	50	50	ENSMUST00000057892.15	ENSMUSG00000040481.18	Bptf	chr11	protein_coding	bromodomain PHD finger transcription factor
chr11	106968594	106969346	-	106968624	106969346	A3SS	0.5	50	50	ENSMUST00000057892.15	ENSMUSG00000040481.18	Bptf	chr11	protein_coding	bromodomain PHD finger transcription factor
chr11	106986016	106986542	-	106973526	106986542	A3SS	0.33	50	50	ENSMUST00000057892.15	ENSMUSG00000040481.18	Bptf	chr11	protein_coding	bromodomain PHD finger transcription factor
chr11	106977723	106986542	-	106977723;106986016	106985828;106986542	ES	0.33	50	50	ENSMUST00000106763.8	ENSMUSG00000040481.18	Bptf	chr11	protein_coding	bromodomain PHD finger transcription factor
chr11	107064287	107064430	-	107064227	107064430	A3SS	0.5	50	50	ENSMUST00000106757.8	ENSMUSG00000018433.15	Nol11	chr11	protein_coding	nucleolar protein 11
chr11	107103484;107107622	107107504;107117057	-	107103484	107117057	cassetteExon	0.5	100	100	ENSMUST00000040380.13	ENSMUSG00000040430.19	Pitpnc1	chr11	protein_coding	phosphatidylinositol transfer protein, cytoplasmic 1
chr11	107228386	107238915	-	107228386	107360717	A5SS	0.5	50	50	ENSMUST00000103064.10	ENSMUSG00000040430.19	Pitpnc1	chr11	protein_coding	phosphatidylinositol transfer protein, cytoplasmic 1
chr11	107370510	107376534	+	107370510;107376435	107376376;107376534	ES	0.5	50	50	ENSMUST00000021063.13	ENSMUSG00000020720.14	Psmd12	chr11	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 12
chr11	107386591	107394444	+	107386591	107388350	3pMXE	0.5	50	50	ENSMUST00000021063.13	ENSMUSG00000020720.14	Psmd12	chr11	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 12
chr11	107440227	107465764	+	107440227;107446401	107446345;107465764	ES	0.5	50	50	ENSMUST00000141730.8	ENSMUSG00000020721.17	Helz	chr11	protein_coding	helicase with zinc finger domain
chr11	107517540	107518176	+	107517540	107518179	A3SS	0.5	50	50	ENSMUST00000100305.8	ENSMUSG00000020721.17	Helz	chr11	protein_coding	helicase with zinc finger domain
chr11	107562107;107562861	107562699;107563355	+	107562107	107563355	cassetteExon	0.5	100	100	ENSMUST00000075012.8	ENSMUSG00000020721.17	Helz	chr11	protein_coding	helicase with zinc finger domain
chr11	107563871;107574491	107574407;107576117	+	107563871	107576117	cassetteExon	0.5	100	100	ENSMUST00000075012.8	ENSMUSG00000020721.17	Helz	chr11	protein_coding	helicase with zinc finger domain
chr11	107775407	107805726	-	107775407	107802126	5pMXE	0.5	50	50	ENSMUST00000106742.8	ENSMUSG00000040373.13	Cacng5	chr11	protein_coding	calcium channel, voltage-dependent, gamma subunit 5
chr11	107870091	107870237	-	107870091	107872437	A5SS	0.5	50	50	ENSMUST00000059595.11	ENSMUSG00000050965.15	Prkca	chr11	protein_coding	protein kinase C, alpha
chr11	108272222	108286128	+	108234350	108286128	A5SS	0.5	50	50	ENSMUST00000133383.8	ENSMUSG00000000049.12	Apoh	chr11	protein_coding	apolipoprotein H
chr11	108272222	108286131	+	108272222	108286128	A3SS	0.5	50	50	ENSMUST00000146050.2	ENSMUSG00000000049.12	Apoh	chr11	protein_coding	apolipoprotein H
chr11	108268973	108271780	+	108268973	108269676	3pMXE	0.5	50	50	ENSMUST00000139207.2	ENSMUSG00000084916.2	Gm11656	chr11	lncRNA	predicted gene 11656
chr11	108331422	108362843	+	108331422;108361208	108361118;108362843	ES	0.5	50	50	ENSMUST00000150863.9	ENSMUSG00000020728.18	Cep112	chr11	protein_coding	centrosomal protein 112
chr11	108316177;108323688	108323582;108324952	+	108316177	108324952	cassetteExon	0.5	100	100	ENSMUST00000150863.9	ENSMUSG00000020728.18	Cep112	chr11	protein_coding	centrosomal protein 112
chr11	108316232	108324952	+	108316177	108324952	A5SS	0.2	50	50	ENSMUST00000150863.9	ENSMUSG00000020728.18	Cep112	chr11	protein_coding	centrosomal protein 112
chr11	108316431	108324952	+	108316177	108324952	A5SS	0.2	50	50	ENSMUST00000150863.9	ENSMUSG00000020728.18	Cep112	chr11	protein_coding	centrosomal protein 112
chr11	108316476	108324952	+	108316177	108324952	A5SS	0.2	50	50	ENSMUST00000150863.9	ENSMUSG00000020728.18	Cep112	chr11	protein_coding	centrosomal protein 112
chr11	108478008	108481830	+	108461249	108481830	A5SS	0.5	50	50	ENSMUST00000150863.9	ENSMUSG00000020728.18	Cep112	chr11	protein_coding	centrosomal protein 112
chr11	108496282	108497039	+	108481937	108497039	A5SS	0.5	50	50	ENSMUST00000150863.9	ENSMUSG00000020728.18	Cep112	chr11	protein_coding	centrosomal protein 112
chr11	108528265	108555322	+	108497221	108555322	A5SS	0.33	50	50	ENSMUST00000150863.9	ENSMUSG00000020728.18	Cep112	chr11	protein_coding	centrosomal protein 112
chr11	108532273	108555322	+	108497221	108555322	A5SS	0.33	50	50	ENSMUST00000150863.9	ENSMUSG00000020728.18	Cep112	chr11	protein_coding	centrosomal protein 112
chr11	108573701	108643404	+	108555552	108643404	A5SS	0.33	50	50	ENSMUST00000150863.9	ENSMUSG00000020728.18	Cep112	chr11	protein_coding	centrosomal protein 112
chr11	108573701	108648496	+	108643466	108648496	A5SS&ES	0.5	50	50	ENSMUST00000150863.9	ENSMUSG00000020728.18	Cep112	chr11	protein_coding	centrosomal protein 112
chr11	108573701	108699476	+	108648645	108699476	A5SS&ES	0.33	50	50	ENSMUST00000150863.9	ENSMUSG00000020728.18	Cep112	chr11	protein_coding	centrosomal protein 112
chr11	108601008	108643404	+	108555552	108643404	A5SS	0.33	50	50	ENSMUST00000150863.9	ENSMUSG00000020728.18	Cep112	chr11	protein_coding	centrosomal protein 112
chr11	108316232	108324952	+	108323688	108324952	A5SS&ES	0.2	50	50	ENSMUST00000061287.12	ENSMUSG00000020728.18	Cep112	chr11	protein_coding	centrosomal protein 112
chr11	108316431	108324952	+	108323688	108324952	A5SS&ES	0.2	50	50	ENSMUST00000061287.12	ENSMUSG00000020728.18	Cep112	chr11	protein_coding	centrosomal protein 112
chr11	108316476	108324952	+	108323688	108324952	A5SS&ES	0.2	50	50	ENSMUST00000061287.12	ENSMUSG00000020728.18	Cep112	chr11	protein_coding	centrosomal protein 112
chr11	108316431	108324952	+	108316232	108324952	A5SS	0.2	50	50	ENSMUST00000149683.9	ENSMUSG00000020728.18	Cep112	chr11	protein_coding	centrosomal protein 112
chr11	108316476	108324952	+	108316232	108324952	A5SS	0.2	50	50	ENSMUST00000149683.9	ENSMUSG00000020728.18	Cep112	chr11	protein_coding	centrosomal protein 112
chr11	108316431	108324952	+	108316476	108324952	A5SS	0.2	50	50	ENSMUST00000138538.9	ENSMUSG00000020728.18	Cep112	chr11	protein_coding	centrosomal protein 112
chr11	108362920;108377816	108377419;108389070	+	108362920	108389070	cassetteExon	0.5	100	100	ENSMUST00000182729.8	ENSMUSG00000020728.18	Cep112	chr11	protein_coding	centrosomal protein 112
chr11	108555552	108643404	+	108555552	108699476	A3SS	0.5	50	50	ENSMUST00000133670.9	ENSMUSG00000020728.18	Cep112	chr11	protein_coding	centrosomal protein 112
chr11	108573701	108699476	+	108555552	108699476	A5SS	0.33	50	50	ENSMUST00000133670.9	ENSMUSG00000020728.18	Cep112	chr11	protein_coding	centrosomal protein 112
chr11	108648645	108699476	+	108555552	108699476	A5SS	0.33	50	50	ENSMUST00000133670.9	ENSMUSG00000020728.18	Cep112	chr11	protein_coding	centrosomal protein 112
chr11	108532273	108555322	+	108528265	108555322	A5SS	0.33	50	50	ENSMUST00000129814.8	ENSMUSG00000020728.18	Cep112	chr11	protein_coding	centrosomal protein 112
chr11	108573701	108699476	+	108573701;108648645	108648496;108699476	ES	0.5	50	50	ENSMUST00000106718.10	ENSMUSG00000020728.18	Cep112	chr11	protein_coding	centrosomal protein 112
chr11	108573701;108643466	108643404;108648496	+	108573701	108648496	cassetteExon	0.5	100	100	ENSMUST00000106718.10	ENSMUSG00000020728.18	Cep112	chr11	protein_coding	centrosomal protein 112
chr11	108601008	108643404	+	108573701	108643404	A5SS	0.33	50	50	ENSMUST00000106715.8	ENSMUSG00000020728.18	Cep112	chr11	protein_coding	centrosomal protein 112
chr11	108573701	108643404	+	108573701	108699476	A3SS	0.33	50	50	ENSMUST00000106724.10	ENSMUSG00000020728.18	Cep112	chr11	protein_coding	centrosomal protein 112
chr11	108833522	108834482	+	108833522;108833955	108833761;108834482	ES	0.5	50	50	ENSMUST00000052915.14	ENSMUSG00000000142.16	Axin2	chr11	protein_coding	axin 2
chr11	108812019	108813978	+	108811387	108813978	A5SS	0.25	50	50	ENSMUST00000052915.14	ENSMUSG00000000142.16	Axin2	chr11	protein_coding	axin 2
chr11	108812191	108813978	+	108811387	108813978	A5SS	0.25	50	50	ENSMUST00000052915.14	ENSMUSG00000000142.16	Axin2	chr11	protein_coding	axin 2
chr11	108812822	108813978	+	108811387	108813978	A5SS	0.25	50	50	ENSMUST00000052915.14	ENSMUSG00000000142.16	Axin2	chr11	protein_coding	axin 2
chr11	108812191	108813978	+	108812019	108813978	A5SS	0.25	50	50	ENSMUST00000140821.2	ENSMUSG00000000142.16	Axin2	chr11	protein_coding	axin 2
chr11	108812822	108813978	+	108812019	108813978	A5SS	0.25	50	50	ENSMUST00000140821.2	ENSMUSG00000000142.16	Axin2	chr11	protein_coding	axin 2
chr11	108812822	108813978	+	108812191	108813978	A5SS	0.25	50	50	ENSMUST00000152909.2	ENSMUSG00000000142.16	Axin2	chr11	protein_coding	axin 2
chr11	109137394	109137481	-	109137394	109138890	A5SS	0.5	50	50	ENSMUST00000020920.10	ENSMUSG00000020599.14	Rgs9	chr11	protein_coding	regulator of G-protein signaling 9
chr11	109246065	109247566	-	109245094	109247566	A3SS	0.5	50	50	ENSMUST00000188296.7	ENSMUSG00000056687.10	Gm11696	chr11	lncRNA	predicted gene 11696
chr11	109245094	109245201	-	109245094	109247566	A5SS	0.5	50	50	ENSMUST00000188296.7	ENSMUSG00000056687.10	Gm11696	chr11	lncRNA	predicted gene 11696
chr11	109256588	109283172	+	109256588	109271041	3pMXE	0.5	50	50	ENSMUST00000106702.4	ENSMUSG00000020611.15	Gna13	chr11	protein_coding	guanine nucleotide binding protein, alpha 13
chr11	109324879	109327389	+	109324879;109325582	109325406;109327389	ES	0.5	50	50	ENSMUST00000092500.11	ENSMUSG00000020610.18	Amz2	chr11	protein_coding	archaelysin family metallopeptidase 2
chr11	109325582	109342588	+	109325582	109327389	3pMXE	0.5	50	50	ENSMUST00000092500.11	ENSMUSG00000020610.18	Amz2	chr11	protein_coding	archaelysin family metallopeptidase 2
chr11	109323793	109324716	+	109320878	109324716	A5SS	0.5	50	50	ENSMUST00000092500.11	ENSMUSG00000020610.18	Amz2	chr11	protein_coding	archaelysin family metallopeptidase 2
chr11	109324879	109327389	+	109324879	109325406	A3SS&ES	0.5	50	50	ENSMUST00000020929.17	ENSMUSG00000020610.18	Amz2	chr11	protein_coding	archaelysin family metallopeptidase 2
chr11	109331081	109342588	+	109325582	109342588	A5SS	0.5	50	50	ENSMUST00000020929.17	ENSMUSG00000020610.18	Amz2	chr11	protein_coding	archaelysin family metallopeptidase 2
chr11	109349431	109354136	-	109349431;109350768	109350625;109354136	ES	0.5	50	50	ENSMUST00000070152.12	ENSMUSG00000041920.15	Slc16a6	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 6
chr11	109354374	109357102	-	109354374	109364074	A5SS	0.25	50	50	ENSMUST00000070152.12	ENSMUSG00000041920.15	Slc16a6	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 6
chr11	109354374	109363350	-	109354374	109364074	A5SS	0.25	50	50	ENSMUST00000070152.12	ENSMUSG00000041920.15	Slc16a6	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 6
chr11	109354374	109363764	-	109354374	109364074	A5SS	0.25	50	50	ENSMUST00000070152.12	ENSMUSG00000041920.15	Slc16a6	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 6
chr11	109357627	109363764	-	109354374	109363764	A3SS	0.5	50	50	ENSMUST00000070872.13	ENSMUSG00000041920.15	Slc16a6	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 6
chr11	109354374	109357102	-	109354374	109363764	A5SS	0.25	50	50	ENSMUST00000070872.13	ENSMUSG00000041920.15	Slc16a6	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 6
chr11	109354374	109363350	-	109354374	109363764	A5SS	0.25	50	50	ENSMUST00000070872.13	ENSMUSG00000041920.15	Slc16a6	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 6
chr11	109354374	109363350	-	109354374	109357102	5pMXE	0.25	50	50	ENSMUST00000032206.9	ENSMUSG00000041920.15	Slc16a6	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 6
chr11	109349431	109354136	-	109350768	109354136	3pMXE	0.5	50	50	ENSMUST00000168740.3	ENSMUSG00000041920.15	Slc16a6	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 6
chr11	109434654	109438840	+	109426163	109438840	A5SS	0.5	50	50	ENSMUST00000020928.13	ENSMUSG00000020604.14	Arsg	chr11	protein_coding	arylsulfatase G
chr11	109540353;109541450	109541267;109544605	+	109540353	109544605	cassetteExon	0.5	100	100	ENSMUST00000123354.8	ENSMUSG00000020612.17	Prkar1a	chr11	protein_coding	protein kinase, cAMP dependent regulatory, type I, alpha
chr11	109541899	109544605	+	109540353	109544605	A5SS	0.33	50	50	ENSMUST00000123354.8	ENSMUSG00000020612.17	Prkar1a	chr11	protein_coding	protein kinase, cAMP dependent regulatory, type I, alpha
chr11	109541899	109544605	+	109541450	109544605	A5SS	0.33	50	50	ENSMUST00000106677.8	ENSMUSG00000020612.17	Prkar1a	chr11	protein_coding	protein kinase, cAMP dependent regulatory, type I, alpha
chr11	109540353	109544605	+	109541450	109544605	5pMXE	0.33	50	50	ENSMUST00000106676.8	ENSMUSG00000020612.17	Prkar1a	chr11	protein_coding	protein kinase, cAMP dependent regulatory, type I, alpha
chr11	109566803	109567980	-	109566778	109567980	A3SS	0.5	50	50	ENSMUST00000155559.8	ENSMUSG00000020614.14	Fam20a	chr11	protein_coding	FAM20A, golgi associated secretory pathway pseudokinase
chr11	109564390	109565434	-	109564390	109565449	A5SS	0.5	50	50	ENSMUST00000155559.8	ENSMUSG00000020614.14	Fam20a	chr11	protein_coding	FAM20A, golgi associated secretory pathway pseudokinase
chr11	109682620	109688104	-	109682620;109685105	109684932;109688104	ES	0.5	50	50	ENSMUST00000106674.8	ENSMUSG00000020617.14	1700012B07Rik	chr11	protein_coding	RIKEN cDNA 1700012B07 gene
chr11	109704572	109704838	-	109704572	109718664	A5SS	0.5	50	50	ENSMUST00000106674.8	ENSMUSG00000020617.14	1700012B07Rik	chr11	protein_coding	RIKEN cDNA 1700012B07 gene
chr11	109864644	109865816	-	109864644;109865519	109865334;109865816	ES	0.5	50	50	ENSMUST00000020948.15	ENSMUSG00000020620.15	Abca8b	chr11	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 8b
chr11	109980775	109982345	-	109980940	109982345	A3SS	0.5	50	50	ENSMUST00000100287.9	ENSMUSG00000041828.16	Abca8a	chr11	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 8a
chr11	109982446	109986689	-	109982446	109986730	A5SS	0.5	50	50	ENSMUST00000100287.9	ENSMUSG00000041828.16	Abca8a	chr11	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 8a
chr11	110049883	110053997	-	110049883;110051390	110051226;110053997	ES	0.5	50	50	ENSMUST00000044850.4	ENSMUSG00000041797.8	Abca9	chr11	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 9
chr11	110220082;110220248	110220160;110228311	-	110220082	110228311	cassetteExon	0.5	100	100	ENSMUST00000043961.12	ENSMUSG00000018800.15	Abca5	chr11	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 5
chr11	110220082	110228420	-	110220082	110228311	A5SS	0.33	50	50	ENSMUST00000043961.12	ENSMUSG00000018800.15	Abca5	chr11	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 5
chr11	110220082	110228420	-	110220082	110220160	A5SS&ES	0.33	50	50	ENSMUST00000124714.8	ENSMUSG00000018800.15	Abca5	chr11	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 5
chr11	110368262	110373365	+	110290251	110373365	A5SS	0.33	50	50	ENSMUST00000020949.12	ENSMUSG00000020623.12	Map2k6	chr11	protein_coding	mitogen-activated protein kinase kinase 6
chr11	110370261	110373365	+	110290251	110373365	A5SS	0.33	50	50	ENSMUST00000020949.12	ENSMUSG00000020623.12	Map2k6	chr11	protein_coding	mitogen-activated protein kinase kinase 6
chr11	110381639	110383339	+	110381701	110383339	A5SS	0.5	50	50	ENSMUST00000020949.12	ENSMUSG00000020623.12	Map2k6	chr11	protein_coding	mitogen-activated protein kinase kinase 6
chr11	110390348	110397532	+	110390348	110415430	A3SS	0.5	50	50	ENSMUST00000100260.2	ENSMUSG00000020623.12	Map2k6	chr11	protein_coding	mitogen-activated protein kinase kinase 6
chr11	110370261	110373365	+	110368262	110373365	A5SS	0.33	50	50	ENSMUST00000146540.8	ENSMUSG00000020623.12	Map2k6	chr11	protein_coding	mitogen-activated protein kinase kinase 6
chr11	110858921	110915235	+	110858921;110877336	110877256;110915235	ES	0.25	50	50	ENSMUST00000180023.8	ENSMUSG00000051497.16	Kcnj16	chr11	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 16
chr11	110888423	110915235	+	110877336	110915235	A5SS	0.25	50	50	ENSMUST00000180023.8	ENSMUSG00000051497.16	Kcnj16	chr11	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 16
chr11	110914806	110915235	+	110877336	110915235	A5SS	0.25	50	50	ENSMUST00000180023.8	ENSMUSG00000051497.16	Kcnj16	chr11	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 16
chr11	110888423	110915235	+	110858921	110915235	A5SS	0.25	50	50	ENSMUST00000106636.8	ENSMUSG00000051497.16	Kcnj16	chr11	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 16
chr11	110914806	110915235	+	110858921	110915235	A5SS	0.25	50	50	ENSMUST00000106636.8	ENSMUSG00000051497.16	Kcnj16	chr11	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 16
chr11	110914806	110915235	+	110888423	110915235	A5SS	0.25	50	50	ENSMUST00000106635.2	ENSMUSG00000051497.16	Kcnj16	chr11	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 16
chr11	112582261	112613123	-	112582261	112601908	5pMXE	0.33	50	50	ENSMUST00000124028.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112555782;112561231	112561063;112562910	-	112555782;112560153	112560027;112562910	MXE	0.5	100	100	ENSMUST00000124028.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112563798;112571776	112571748;112582118	-	112563798	112582118	cassetteExon	0.5	100	100	ENSMUST00000124028.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112582261;112582540	112582329;112601908	-	112582261	112601908	cassetteExon	0.5	100	100	ENSMUST00000124028.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112563060	112563744	-	112563230	112563744	A3SS	0.5	50	50	ENSMUST00000124028.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112568684	112582118	-	112563798	112582118	A3SS	0.2	50	50	ENSMUST00000124028.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112575767	112582118	-	112563798	112582118	A3SS	0.2	50	50	ENSMUST00000124028.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112579277	112582118	-	112563798	112582118	A3SS	0.2	50	50	ENSMUST00000124028.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112563798	112567513	-	112563798	112582118	A5SS	0.33	50	50	ENSMUST00000124028.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112555782	112561063	-	112555782	112560027	5pMXE	0.5	50	50	ENSMUST00000141399.2	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112563798	112571748	-	112563798	112567513	5pMXE	0.33	50	50	ENSMUST00000133231.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112561231	112562910	-	112560153	112562910	A3SS	0.5	50	50	ENSMUST00000133231.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112582540	112601908	-	112582540	112601692	5pMXE	0.5	50	50	ENSMUST00000154379.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112563798;112582261	112582118;112582329	-	112563798;112571776	112571748;112582329	MXE	0.5	100	100	ENSMUST00000154379.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112571776;112582261	112582118;112582329	-	112571776	112582329	cassetteExon	0.5	100	100	ENSMUST00000154379.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112568684	112571748	-	112563798	112571748	A3SS	0.5	50	50	ENSMUST00000154379.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112575767	112582329	-	112571776	112582329	A3SS	0.33	50	50	ENSMUST00000154379.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112575767	112582329	-	112582261	112582329	A3SS&ES	0.33	50	50	ENSMUST00000143760.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112568684	112582118	-	112568684;112571776	112571748;112582118	ES	0.25	50	50	ENSMUST00000125873.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112571776	112582329	-	112571776	112582118	5pMXE	0.5	50	50	ENSMUST00000125873.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112575767	112582118	-	112571776	112582118	A3SS	0.25	50	50	ENSMUST00000125873.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112579277	112582118	-	112571776	112582118	A3SS	0.25	50	50	ENSMUST00000125873.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112575767	112582118	-	112568684	112582118	A3SS	0.2	50	50	ENSMUST00000151650.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112579277	112582118	-	112568684	112582118	A3SS	0.2	50	50	ENSMUST00000151650.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112568684;112582261	112582118;112582329	-	112568684;112571776	112571748;112582329	MXE	0.5	100	100	ENSMUST00000156388.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112568684;112582261	112582118;112601908	-	112568684;112582540	112571748;112601908	MXE	0.5	100	100	ENSMUST00000156388.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112571776;112582261	112582118;112601908	-	112571776;112582540	112582329;112601908	MXE	0.5	100	100	ENSMUST00000156388.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112579277	112582118	-	112575767	112582118	A3SS	0.2	50	50	ENSMUST00000144036.2	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112575767	112582329	-	112575767	112582118	A5SS	0.5	50	50	ENSMUST00000144036.2	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112575767;112582261	112582118;112582329	-	112575767	112582329	cassetteExon	0.5	100	100	ENSMUST00000142413.2	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112575767;112582261	112582118;112601908	-	112575767;112582540	112582329;112601908	MXE	0.5	100	100	ENSMUST00000142413.2	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112582261	112601908	-	112582540	112601908	A3SS	0.5	50	50	ENSMUST00000131057.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112602014	112602108	-	112602014	112602105	A5SS	0.5	50	50	ENSMUST00000131057.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112612712	112613123	-	112582261	112613123	A3SS	0.5	50	50	ENSMUST00000137081.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112582261	112582329	-	112582261	112613123	A5SS	0.33	50	50	ENSMUST00000137081.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112613231	112629898	-	112613231	112665125	A5SS	0.5	50	50	ENSMUST00000137081.8	ENSMUSG00000041674.17	BC006965	chr11	lncRNA	cDNA sequence BC006965
chr11	112958212	113092115	-	112958212	113063779	5pMXE	0.33	50	50	ENSMUST00000136438.8	ENSMUSG00000087259.8	2610035D17Rik	chr11	lncRNA	RIKEN cDNA 2610035D17 gene
chr11	112958212;112963726	112963594;113063779	-	112958212	113063779	cassetteExon	0.5	100	100	ENSMUST00000136438.8	ENSMUSG00000087259.8	2610035D17Rik	chr11	lncRNA	RIKEN cDNA 2610035D17 gene
chr11	112958212	113092115	-	112935988	113092115	A3SS	0.5	50	50	ENSMUST00000145206.2	ENSMUSG00000087259.8	2610035D17Rik	chr11	lncRNA	RIKEN cDNA 2610035D17 gene
chr11	112958212	112963594	-	112958212	113092115	A5SS	0.33	50	50	ENSMUST00000127263.8	ENSMUSG00000087259.8	2610035D17Rik	chr11	lncRNA	RIKEN cDNA 2610035D17 gene
chr11	113452950	113482608	-	113452950	113456502	5pMXE	0.2	50	50	ENSMUST00000071539.10	ENSMUSG00000041654.16	Slc39a11	chr11	protein_coding	solute carrier family 39 (metal ion transporter), member 11
chr11	113452950	113504210	-	113452950	113456502	5pMXE	0.2	50	50	ENSMUST00000071539.10	ENSMUSG00000041654.16	Slc39a11	chr11	protein_coding	solute carrier family 39 (metal ion transporter), member 11
chr11	113452950	113540768	-	113452950	113456502	5pMXE	0.2	50	50	ENSMUST00000071539.10	ENSMUSG00000041654.16	Slc39a11	chr11	protein_coding	solute carrier family 39 (metal ion transporter), member 11
chr11	113354921;113413831	113413727;113414292	-	113354921	113414292	cassetteExon	0.5	100	100	ENSMUST00000071539.10	ENSMUSG00000041654.16	Slc39a11	chr11	protein_coding	solute carrier family 39 (metal ion transporter), member 11
chr11	113260724	113354777	-	113260724	113354798	A5SS	0.5	50	50	ENSMUST00000071539.10	ENSMUSG00000041654.16	Slc39a11	chr11	protein_coding	solute carrier family 39 (metal ion transporter), member 11
chr11	113452950	113456412	-	113452950	113456502	A5SS	0.2	50	50	ENSMUST00000071539.10	ENSMUSG00000041654.16	Slc39a11	chr11	protein_coding	solute carrier family 39 (metal ion transporter), member 11
chr11	113452950;113482758	113482608;113540768	-	113452950	113540768	cassetteExon	0.5	100	100	ENSMUST00000125890.8	ENSMUSG00000041654.16	Slc39a11	chr11	protein_coding	solute carrier family 39 (metal ion transporter), member 11
chr11	113452950;113504305	113504210;113540768	-	113452950	113540768	cassetteExon	0.5	100	100	ENSMUST00000125890.8	ENSMUSG00000041654.16	Slc39a11	chr11	protein_coding	solute carrier family 39 (metal ion transporter), member 11
chr11	113452950	113456412	-	113452950	113540768	A5SS	0.2	50	50	ENSMUST00000125890.8	ENSMUSG00000041654.16	Slc39a11	chr11	protein_coding	solute carrier family 39 (metal ion transporter), member 11
chr11	113452950	113482608	-	113452950	113456412	5pMXE	0.2	50	50	ENSMUST00000149034.8	ENSMUSG00000041654.16	Slc39a11	chr11	protein_coding	solute carrier family 39 (metal ion transporter), member 11
chr11	113452950	113504210	-	113452950	113456412	5pMXE	0.2	50	50	ENSMUST00000149034.8	ENSMUSG00000041654.16	Slc39a11	chr11	protein_coding	solute carrier family 39 (metal ion transporter), member 11
chr11	113452950;113504305	113504210;113540768	-	113452950;113482758	113482608;113540768	MXE	0.5	100	100	ENSMUST00000146031.8	ENSMUSG00000041654.16	Slc39a11	chr11	protein_coding	solute carrier family 39 (metal ion transporter), member 11
chr11	113468539	113482608	-	113452950	113482608	A3SS	0.5	50	50	ENSMUST00000146031.8	ENSMUSG00000041654.16	Slc39a11	chr11	protein_coding	solute carrier family 39 (metal ion transporter), member 11
chr11	113504305	113540768	-	113482758	113540768	A3SS	0.5	50	50	ENSMUST00000123153.2	ENSMUSG00000041654.16	Slc39a11	chr11	protein_coding	solute carrier family 39 (metal ion transporter), member 11
chr11	113552044	113557585	+	113552044	113553033	3pMXE	0.33	50	50	ENSMUST00000018805.15	ENSMUSG00000018661.18	Cog1	chr11	protein_coding	component of oligomeric golgi complex 1
chr11	113552044;113552519	113552485;113553033	+	113552044	113553033	cassetteExon	0.5	100	100	ENSMUST00000018805.15	ENSMUSG00000018661.18	Cog1	chr11	protein_coding	component of oligomeric golgi complex 1
chr11	113550203	113551791	+	113550203	113551769	A3SS	0.5	50	50	ENSMUST00000018805.15	ENSMUSG00000018661.18	Cog1	chr11	protein_coding	component of oligomeric golgi complex 1
chr11	113552042	113553033	+	113552044	113553033	A5SS	0.33	50	50	ENSMUST00000018805.15	ENSMUSG00000018661.18	Cog1	chr11	protein_coding	component of oligomeric golgi complex 1
chr11	113540701	113542671	+	113540701	113547829	A3SS	0.5	50	50	ENSMUST00000063776.14	ENSMUSG00000018661.18	Cog1	chr11	protein_coding	component of oligomeric golgi complex 1
chr11	113547474	113547829	+	113540701	113547829	A5SS	0.5	50	50	ENSMUST00000063776.14	ENSMUSG00000018661.18	Cog1	chr11	protein_coding	component of oligomeric golgi complex 1
chr11	113552044	113552485	+	113552044	113557585	A3SS	0.33	50	50	ENSMUST00000148736.8	ENSMUSG00000018661.18	Cog1	chr11	protein_coding	component of oligomeric golgi complex 1
chr11	113552519	113553033	+	113552042	113553033	A5SS	0.33	50	50	ENSMUST00000152653.8	ENSMUSG00000018661.18	Cog1	chr11	protein_coding	component of oligomeric golgi complex 1
chr11	113575537	113578600	+	113575636	113578600	A5SS	0.33	50	50	ENSMUST00000042227.15	ENSMUSG00000041623.18	D11Wsu47e	chr11	protein_coding	DNA segment, Chr 11, Wayne State University 47, expressed
chr11	113576097	113578600	+	113575636	113578600	A5SS	0.33	50	50	ENSMUST00000042227.15	ENSMUSG00000041623.18	D11Wsu47e	chr11	protein_coding	DNA segment, Chr 11, Wayne State University 47, expressed
chr11	113575537	113578600	+	113575537;113576097	113576016;113578600	ES	0.33	50	50	ENSMUST00000123466.2	ENSMUSG00000041623.18	D11Wsu47e	chr11	protein_coding	DNA segment, Chr 11, Wayne State University 47, expressed
chr11	113575537	113578600	+	113576097	113578600	5pMXE	0.33	50	50	ENSMUST00000153732.2	ENSMUSG00000041623.18	D11Wsu47e	chr11	protein_coding	DNA segment, Chr 11, Wayne State University 47, expressed
chr11	113590808	113592882	-	113590739	113592882	A3SS	0.5	50	50	ENSMUST00000106617.8	ENSMUSG00000018727.20	Cpsf4l	chr11	protein_coding	cleavage and polyadenylation specific factor 4-like
chr11	113590808	113593239	-	113592921	113593239	A3SS&ES	0.5	50	50	ENSMUST00000106617.8	ENSMUSG00000018727.20	Cpsf4l	chr11	protein_coding	cleavage and polyadenylation specific factor 4-like
chr11	113593332	113594097	-	113593335	113594097	A3SS	0.5	50	50	ENSMUST00000106617.8	ENSMUSG00000018727.20	Cpsf4l	chr11	protein_coding	cleavage and polyadenylation specific factor 4-like
chr11	113590808	113593239	-	113590808;113592921	113592882;113593239	ES	0.5	50	50	ENSMUST00000173655.8	ENSMUSG00000018727.20	Cpsf4l	chr11	protein_coding	cleavage and polyadenylation specific factor 4-like
chr11	113599680	113600648	-	113599680	113600213	5pMXE	0.33	50	50	ENSMUST00000173655.8	ENSMUSG00000018727.20	Cpsf4l	chr11	protein_coding	cleavage and polyadenylation specific factor 4-like
chr11	113599680	113600054	-	113599680	113600213	A5SS	0.33	50	50	ENSMUST00000173655.8	ENSMUSG00000018727.20	Cpsf4l	chr11	protein_coding	cleavage and polyadenylation specific factor 4-like
chr11	113599680	113600648	-	113599680	113600054	5pMXE	0.33	50	50	ENSMUST00000100248.6	ENSMUSG00000018727.20	Cpsf4l	chr11	protein_coding	cleavage and polyadenylation specific factor 4-like
chr11	113620491	113642514	-	113620491	113641556	5pMXE	0.25	50	50	ENSMUST00000106616.2	ENSMUSG00000041598.8	Cdc42ep4	chr11	protein_coding	CDC42 effector protein (Rho GTPase binding) 4
chr11	113620491	113630105	-	113620491	113641556	A5SS	0.25	50	50	ENSMUST00000106616.2	ENSMUSG00000041598.8	Cdc42ep4	chr11	protein_coding	CDC42 effector protein (Rho GTPase binding) 4
chr11	113620491	113641780	-	113620491	113641556	A5SS	0.25	50	50	ENSMUST00000106616.2	ENSMUSG00000041598.8	Cdc42ep4	chr11	protein_coding	CDC42 effector protein (Rho GTPase binding) 4
chr11	113620491	113630105	-	113620491	113642514	A5SS	0.25	50	50	ENSMUST00000053536.5	ENSMUSG00000041598.8	Cdc42ep4	chr11	protein_coding	CDC42 effector protein (Rho GTPase binding) 4
chr11	113620491	113641780	-	113620491	113642514	A5SS	0.25	50	50	ENSMUST00000053536.5	ENSMUSG00000041598.8	Cdc42ep4	chr11	protein_coding	CDC42 effector protein (Rho GTPase binding) 4
chr11	113620491	113641780	-	113620491	113630105	5pMXE	0.25	50	50	ENSMUST00000131488.2	ENSMUSG00000041598.8	Cdc42ep4	chr11	protein_coding	CDC42 effector protein (Rho GTPase binding) 4
chr11	113684689	113690969	-	113684689;113685913	113685749;113690969	ES	0.5	50	50	ENSMUST00000041627.14	ENSMUSG00000041592.17	Sdk2	chr11	protein_coding	sidekick cell adhesion molecule 2
chr11	113712503	113715841	-	113712503;113714253	113714197;113715841	ES	0.5	50	50	ENSMUST00000041627.14	ENSMUSG00000041592.17	Sdk2	chr11	protein_coding	sidekick cell adhesion molecule 2
chr11	113739577	113741722	-	113733945	113741722	A3SS	0.5	50	50	ENSMUST00000041627.14	ENSMUSG00000041592.17	Sdk2	chr11	protein_coding	sidekick cell adhesion molecule 2
chr11	113715976	113716970	-	113715976	113717268	A5SS	0.5	50	50	ENSMUST00000041627.14	ENSMUSG00000041592.17	Sdk2	chr11	protein_coding	sidekick cell adhesion molecule 2
chr11	114077200	114077379	-	114077172	114077379	A3SS	0.5	50	50	ENSMUST00000154037.2	ENSMUSG00000086135.2	1700001J04Rik	chr11	lncRNA	RIKEN cDNA 1700001J04 gene
chr11	114559452	114559607	+	114559435	114559607	A5SS	0.33	50	50	ENSMUST00000106602.10	ENSMUSG00000057322.13	Rpl38	chr11	protein_coding	ribosomal protein L38
chr11	114559511	114559607	+	114559435	114559607	A5SS	0.33	50	50	ENSMUST00000106602.10	ENSMUSG00000057322.13	Rpl38	chr11	protein_coding	ribosomal protein L38
chr11	114559511	114559607	+	114559452	114559607	A5SS	0.33	50	50	ENSMUST00000077915.10	ENSMUSG00000057322.13	Rpl38	chr11	protein_coding	ribosomal protein L38
chr11	114625515	114629442	+	114625515;114626812	114626691;114629442	ES	0.33	50	50	ENSMUST00000151053.8	ENSMUSG00000034706.17	Dnai2	chr11	protein_coding	dynein axonemal intermediate chain 2
chr11	114618601	114623719	+	114618310	114623719	A5SS	0.33	50	50	ENSMUST00000151053.8	ENSMUSG00000034706.17	Dnai2	chr11	protein_coding	dynein axonemal intermediate chain 2
chr11	114620262	114623719	+	114618310	114623719	A5SS	0.33	50	50	ENSMUST00000151053.8	ENSMUSG00000034706.17	Dnai2	chr11	protein_coding	dynein axonemal intermediate chain 2
chr11	114628020	114629442	+	114626812	114629442	A5SS	0.33	50	50	ENSMUST00000151053.8	ENSMUSG00000034706.17	Dnai2	chr11	protein_coding	dynein axonemal intermediate chain 2
chr11	114642747	114643719	+	114642747	114643683	A3SS	0.5	50	50	ENSMUST00000069325.14	ENSMUSG00000034706.17	Dnai2	chr11	protein_coding	dynein axonemal intermediate chain 2
chr11	114620262	114623719	+	114618601	114623719	A5SS	0.33	50	50	ENSMUST00000069325.14	ENSMUSG00000034706.17	Dnai2	chr11	protein_coding	dynein axonemal intermediate chain 2
chr11	114628020	114629442	+	114625515	114629442	A5SS	0.33	50	50	ENSMUST00000136403.8	ENSMUSG00000034706.17	Dnai2	chr11	protein_coding	dynein axonemal intermediate chain 2
chr11	114670547	114671997	+	114670547;114671704	114671579;114671997	ES	0.5	50	50	ENSMUST00000126555.8	ENSMUSG00000010021.14	Kif19a	chr11	protein_coding	kinesin family member 19A
chr11	114678759	114678900	+	114678735	114678900	A5SS	0.5	50	50	ENSMUST00000138804.8	ENSMUSG00000010021.14	Kif19a	chr11	protein_coding	kinesin family member 19A
chr11	114683348	114686590	-	114684952	114686590	A3SS	0.25	50	50	ENSMUST00000156053.8	ENSMUSG00000000202.10	Btbd17	chr11	protein_coding	BTB (POZ) domain containing 17
chr11	114684884	114686590	-	114684952	114686590	A3SS	0.25	50	50	ENSMUST00000156053.8	ENSMUSG00000000202.10	Btbd17	chr11	protein_coding	BTB (POZ) domain containing 17
chr11	114685047	114686590	-	114684952	114686590	A3SS	0.25	50	50	ENSMUST00000156053.8	ENSMUSG00000000202.10	Btbd17	chr11	protein_coding	BTB (POZ) domain containing 17
chr11	114683348	114686590	-	114683348;114684952	114684676;114686590	ES	0.25	50	50	ENSMUST00000000206.4	ENSMUSG00000000202.10	Btbd17	chr11	protein_coding	BTB (POZ) domain containing 17
chr11	114683374	114684676	-	114683348	114684676	A3SS	0.5	50	50	ENSMUST00000000206.4	ENSMUSG00000000202.10	Btbd17	chr11	protein_coding	BTB (POZ) domain containing 17
chr11	114683348	114686590	-	114684884	114686590	A3SS	0.25	50	50	ENSMUST00000156192.2	ENSMUSG00000000202.10	Btbd17	chr11	protein_coding	BTB (POZ) domain containing 17
chr11	114685047	114686590	-	114684884	114686590	A3SS	0.25	50	50	ENSMUST00000156192.2	ENSMUSG00000000202.10	Btbd17	chr11	protein_coding	BTB (POZ) domain containing 17
chr11	114683348;114684884	114684676;114686590	-	114683348	114686590	cassetteExon	0.5	100	100	ENSMUST00000141481.2	ENSMUSG00000000202.10	Btbd17	chr11	protein_coding	BTB (POZ) domain containing 17
chr11	114683348;114685047	114684676;114686590	-	114683348	114686590	cassetteExon	0.5	100	100	ENSMUST00000141481.2	ENSMUSG00000000202.10	Btbd17	chr11	protein_coding	BTB (POZ) domain containing 17
chr11	114695292	114696712	+	114695292	114696730	A3SS	0.5	50	50	ENSMUST00000045319.9	ENSMUSG00000034677.10	Gpr142	chr11	protein_coding	G protein-coupled receptor 142
chr11	114742399	114754293	+	114742069	114754293	A5SS	0.16	50	50	ENSMUST00000133245.2	ENSMUSG00000051043.17	Gprc5c	chr11	protein_coding	G protein-coupled receptor, family C, group 5, member C
chr11	114742712	114754293	+	114742069	114754293	A5SS	0.16	50	50	ENSMUST00000133245.2	ENSMUSG00000051043.17	Gprc5c	chr11	protein_coding	G protein-coupled receptor, family C, group 5, member C
chr11	114742812	114754293	+	114742069	114754293	A5SS	0.16	50	50	ENSMUST00000133245.2	ENSMUSG00000051043.17	Gprc5c	chr11	protein_coding	G protein-coupled receptor, family C, group 5, member C
chr11	114743099	114754293	+	114742069	114754293	A5SS	0.16	50	50	ENSMUST00000133245.2	ENSMUSG00000051043.17	Gprc5c	chr11	protein_coding	G protein-coupled receptor, family C, group 5, member C
chr11	114743194	114754293	+	114742069	114754293	A5SS	0.16	50	50	ENSMUST00000133245.2	ENSMUSG00000051043.17	Gprc5c	chr11	protein_coding	G protein-coupled receptor, family C, group 5, member C
chr11	114742399	114754293	+	114742712	114754293	A5SS	0.16	50	50	ENSMUST00000122967.3	ENSMUSG00000051043.17	Gprc5c	chr11	protein_coding	G protein-coupled receptor, family C, group 5, member C
chr11	114742812	114754293	+	114742712	114754293	A5SS	0.16	50	50	ENSMUST00000122967.3	ENSMUSG00000051043.17	Gprc5c	chr11	protein_coding	G protein-coupled receptor, family C, group 5, member C
chr11	114743099	114754293	+	114742712	114754293	A5SS	0.16	50	50	ENSMUST00000122967.3	ENSMUSG00000051043.17	Gprc5c	chr11	protein_coding	G protein-coupled receptor, family C, group 5, member C
chr11	114743194	114754293	+	114742712	114754293	A5SS	0.16	50	50	ENSMUST00000122967.3	ENSMUSG00000051043.17	Gprc5c	chr11	protein_coding	G protein-coupled receptor, family C, group 5, member C
chr11	114755372	114757451	+	114754591	114757451	A5SS	0.5	50	50	ENSMUST00000122967.3	ENSMUSG00000051043.17	Gprc5c	chr11	protein_coding	G protein-coupled receptor, family C, group 5, member C
chr11	114742812	114754293	+	114742399	114754293	A5SS	0.16	50	50	ENSMUST00000177952.8	ENSMUSG00000051043.17	Gprc5c	chr11	protein_coding	G protein-coupled receptor, family C, group 5, member C
chr11	114743099	114754293	+	114742399	114754293	A5SS	0.16	50	50	ENSMUST00000177952.8	ENSMUSG00000051043.17	Gprc5c	chr11	protein_coding	G protein-coupled receptor, family C, group 5, member C
chr11	114743194	114754293	+	114742399	114754293	A5SS	0.16	50	50	ENSMUST00000177952.8	ENSMUSG00000051043.17	Gprc5c	chr11	protein_coding	G protein-coupled receptor, family C, group 5, member C
chr11	114759529	114761147	+	114759471	114761147	A5SS	0.5	50	50	ENSMUST00000053361.12	ENSMUSG00000051043.17	Gprc5c	chr11	protein_coding	G protein-coupled receptor, family C, group 5, member C
chr11	114742812	114754293	+	114743099	114754293	A5SS	0.16	50	50	ENSMUST00000021071.14	ENSMUSG00000051043.17	Gprc5c	chr11	protein_coding	G protein-coupled receptor, family C, group 5, member C
chr11	114743194	114754293	+	114743099	114754293	A5SS	0.16	50	50	ENSMUST00000021071.14	ENSMUSG00000051043.17	Gprc5c	chr11	protein_coding	G protein-coupled receptor, family C, group 5, member C
chr11	114743194	114754293	+	114742812	114754293	A5SS	0.16	50	50	ENSMUST00000136785.2	ENSMUSG00000051043.17	Gprc5c	chr11	protein_coding	G protein-coupled receptor, family C, group 5, member C
chr11	114781260;114782660	114782568;114784064	+	114781260	114784064	cassetteExon	0.5	100	100	ENSMUST00000106582.9	ENSMUSG00000034652.13	Cd300a	chr11	protein_coding	CD300A molecule
chr11	114784420	114785496	+	114784420	114785484	A3SS	0.5	50	50	ENSMUST00000106582.9	ENSMUSG00000034652.13	Cd300a	chr11	protein_coding	CD300A molecule
chr11	114819449	114825035	-	114819225	114825035	A3SS	0.33	50	50	ENSMUST00000149663.4	ENSMUSG00000063193.10	Cd300lb	chr11	protein_coding	CD300 molecule like family member B
chr11	114819486	114825035	-	114819225	114825035	A3SS	0.33	50	50	ENSMUST00000149663.4	ENSMUSG00000063193.10	Cd300lb	chr11	protein_coding	CD300 molecule like family member B
chr11	114819486	114825035	-	114819449	114825035	A3SS	0.33	50	50	ENSMUST00000239005.2	ENSMUSG00000063193.10	Cd300lb	chr11	protein_coding	CD300 molecule like family member B
chr11	114848470	114850393	-	114848470	114850019	A5SS&ES	0.5	50	50	ENSMUST00000106580.3	ENSMUSG00000058728.16	Cd300c	chr11	protein_coding	CD300C molecule
chr11	114850740	114851183	-	114850740	114851171	A5SS	0.5	50	50	ENSMUST00000092466.13	ENSMUSG00000058728.16	Cd300c	chr11	protein_coding	CD300C molecule
chr11	114891899	114892313	-	114891811	114892313	A3SS	0.5	50	50	ENSMUST00000092464.10	ENSMUSG00000044811.14	Cd300c2	chr11	protein_coding	CD300C molecule 2
chr11	115047863	115048777	+	115037478	115048777	A5SS	0.5	50	50	ENSMUST00000067754.11	ENSMUSG00000020732.14	Rab37	chr11	protein_coding	RAB37, member RAS oncogene family
chr11	115011244	115016937	-	115011244;115015203	115015074;115016937	ES	0.33	50	50	ENSMUST00000106561.8	ENSMUSG00000047798.16	Cd300lf	chr11	protein_coding	CD300 molecule like family member F
chr11	115015182	115016937	-	115015203	115016937	A3SS	0.33	50	50	ENSMUST00000106561.8	ENSMUSG00000047798.16	Cd300lf	chr11	protein_coding	CD300 molecule like family member F
chr11	115011244	115016930	-	115011244	115015074	A5SS&ES	0.33	50	50	ENSMUST00000106561.8	ENSMUSG00000047798.16	Cd300lf	chr11	protein_coding	CD300 molecule like family member F
chr11	115017278	115017562	-	115017278	115024665	A5SS	0.5	50	50	ENSMUST00000106561.8	ENSMUSG00000047798.16	Cd300lf	chr11	protein_coding	CD300 molecule like family member F
chr11	115011244	115016937	-	115011244;115015182	115015074;115016937	ES	0.33	50	50	ENSMUST00000051264.14	ENSMUSG00000047798.16	Cd300lf	chr11	protein_coding	CD300 molecule like family member F
chr11	115011244	115016937	-	115011244	115016930	A5SS	0.33	50	50	ENSMUST00000106562.3	ENSMUSG00000047798.16	Cd300lf	chr11	protein_coding	CD300 molecule like family member F
chr11	115011244	115016937	-	115011244	115015074	A5SS	0.33	50	50	ENSMUST00000146254.2	ENSMUSG00000047798.16	Cd300lf	chr11	protein_coding	CD300 molecule like family member F
chr11	115077660	115078485	-	115077660	115077945	5pMXE	0.33	50	50	ENSMUST00000103038.8	ENSMUSG00000015542.18	Nat9	chr11	protein_coding	N-acetyltransferase 9 (GCN5-related, putative)
chr11	115077660	115078647	-	115077660	115077945	5pMXE	0.33	50	50	ENSMUST00000103038.8	ENSMUSG00000015542.18	Nat9	chr11	protein_coding	N-acetyltransferase 9 (GCN5-related, putative)
chr11	115077663	115077945	-	115077660	115077945	A3SS	0.5	50	50	ENSMUST00000103038.8	ENSMUSG00000015542.18	Nat9	chr11	protein_coding	N-acetyltransferase 9 (GCN5-related, putative)
chr11	115077663	115078647	-	115077663	115077956	5pMXE	0.33	50	50	ENSMUST00000103039.2	ENSMUSG00000015542.18	Nat9	chr11	protein_coding	N-acetyltransferase 9 (GCN5-related, putative)
chr11	115077663	115077945	-	115077663	115077956	A5SS	0.33	50	50	ENSMUST00000103039.2	ENSMUSG00000015542.18	Nat9	chr11	protein_coding	N-acetyltransferase 9 (GCN5-related, putative)
chr11	115077663	115078647	-	115077663	115077945	5pMXE	0.33	50	50	ENSMUST00000103040.11	ENSMUSG00000015542.18	Nat9	chr11	protein_coding	N-acetyltransferase 9 (GCN5-related, putative)
chr11	115077663	115078647	-	115077660	115078647	A3SS	0.5	50	50	ENSMUST00000103041.8	ENSMUSG00000015542.18	Nat9	chr11	protein_coding	N-acetyltransferase 9 (GCN5-related, putative)
chr11	115077660	115078485	-	115077660	115078647	A5SS	0.33	50	50	ENSMUST00000103041.8	ENSMUSG00000015542.18	Nat9	chr11	protein_coding	N-acetyltransferase 9 (GCN5-related, putative)
chr11	115096409	115134196	+	115096409;115119340	115119247;115134196	ES	0.5	50	50	ENSMUST00000100235.9	ENSMUSG00000045980.14	Tmem104	chr11	protein_coding	transmembrane protein 104
chr11	115095987	115096301	+	115095987	115096304	A3SS	0.5	50	50	ENSMUST00000100235.9	ENSMUSG00000045980.14	Tmem104	chr11	protein_coding	transmembrane protein 104
chr11	115159574;115160442	115160271;115160523	-	115159574	115160523	cassetteExon	0.5	100	100	ENSMUST00000155130.8	ENSMUSG00000018861.9	Fdxr	chr11	protein_coding	ferredoxin reductase
chr11	115160722;115160925	115160841;115161149	-	115160722	115161149	cassetteExon	0.5	100	100	ENSMUST00000155130.8	ENSMUSG00000018861.9	Fdxr	chr11	protein_coding	ferredoxin reductase
chr11	115162771	115163013	-	115162801	115163013	A3SS	0.33	50	50	ENSMUST00000155130.8	ENSMUSG00000018861.9	Fdxr	chr11	protein_coding	ferredoxin reductase
chr11	115162825	115163013	-	115162801	115163013	A3SS	0.33	50	50	ENSMUST00000155130.8	ENSMUSG00000018861.9	Fdxr	chr11	protein_coding	ferredoxin reductase
chr11	115167008	115167635	-	115166976	115167635	A3SS	0.5	50	50	ENSMUST00000155130.8	ENSMUSG00000018861.9	Fdxr	chr11	protein_coding	ferredoxin reductase
chr11	115162771	115163013	-	115162825	115163013	A3SS	0.33	50	50	ENSMUST00000021078.3	ENSMUSG00000018861.9	Fdxr	chr11	protein_coding	ferredoxin reductase
chr11	115187530	115188320	-	115187530	115188140	A5SS	0.5	50	50	ENSMUST00000056153.8	ENSMUSG00000044788.11	Fads6	chr11	protein_coding	fatty acid desaturase domain family, member 6
chr11	115213927	115214212	+	115213927	115214234	A3SS	0.5	50	50	ENSMUST00000055490.9	ENSMUSG00000050201.10	Otop2	chr11	protein_coding	otopetrin 2
chr11	115213691	115213845	+	115198219	115213845	A5SS	0.5	50	50	ENSMUST00000055490.9	ENSMUSG00000050201.10	Otop2	chr11	protein_coding	otopetrin 2
chr11	115231884	115235061	+	115231884	115235118	A3SS	0.5	50	50	ENSMUST00000106543.8	ENSMUSG00000018862.12	Otop3	chr11	protein_coding	otopetrin 3
chr11	115250634	115252465	-	115250634;115251318	115251148;115252465	ES	0.5	50	50	ENSMUST00000044152.13	ENSMUSG00000034586.15	Hid1	chr11	protein_coding	HID1 domain containing
chr11	115250637	115251148	-	115250634	115251148	A3SS	0.5	50	50	ENSMUST00000044152.13	ENSMUSG00000034586.15	Hid1	chr11	protein_coding	HID1 domain containing
chr11	115249909	115250012	-	115249909	115250521	A5SS	0.5	50	50	ENSMUST00000044152.13	ENSMUSG00000034586.15	Hid1	chr11	protein_coding	HID1 domain containing
chr11	115250634	115252465	-	115251318	115252465	A3SS&ES	0.5	50	50	ENSMUST00000106542.9	ENSMUSG00000034586.15	Hid1	chr11	protein_coding	HID1 domain containing
chr11	115250634	115258370	-	115252614	115258370	A3SS&ES	0.5	50	50	ENSMUST00000106542.9	ENSMUSG00000034586.15	Hid1	chr11	protein_coding	HID1 domain containing
chr11	115250634;115252614	115252465;115258370	-	115250634	115258370	cassetteExon	0.5	100	100	ENSMUST00000123428.2	ENSMUSG00000034586.15	Hid1	chr11	protein_coding	HID1 domain containing
chr11	115250634	115251148	-	115250634	115258370	A5SS	0.33	50	50	ENSMUST00000123428.2	ENSMUSG00000034586.15	Hid1	chr11	protein_coding	HID1 domain containing
chr11	115294786	115300306	+	115294786;115297413	115297377;115300306	ES	0.33	50	50	ENSMUST00000153983.8	ENSMUSG00000018858.16	Mrpl58	chr11	protein_coding	mitochondrial ribosomal protein L58
chr11	115297413	115300886	+	115297413;115300365	115300306;115300886	ES	0.5	50	50	ENSMUST00000153983.8	ENSMUSG00000018858.16	Mrpl58	chr11	protein_coding	mitochondrial ribosomal protein L58
chr11	115294699	115297377	+	115294786	115297377	A5SS	0.5	50	50	ENSMUST00000153983.8	ENSMUSG00000018858.16	Mrpl58	chr11	protein_coding	mitochondrial ribosomal protein L58
chr11	115294913	115300306	+	115297413	115300306	A5SS&ES	0.33	50	50	ENSMUST00000153983.8	ENSMUSG00000018858.16	Mrpl58	chr11	protein_coding	mitochondrial ribosomal protein L58
chr11	115294786;115300365	115300306;115300886	+	115294786;115297413	115297377;115300886	MXE	0.5	100	100	ENSMUST00000106539.10	ENSMUSG00000018858.16	Mrpl58	chr11	protein_coding	mitochondrial ribosomal protein L58
chr11	115294786	115300306	+	115297413	115300306	A5SS&ES	0.33	50	50	ENSMUST00000103036.5	ENSMUSG00000018858.16	Mrpl58	chr11	protein_coding	mitochondrial ribosomal protein L58
chr11	115294786	115301464	+	115301227	115301464	A5SS&ES	0.5	50	50	ENSMUST00000103036.5	ENSMUSG00000018858.16	Mrpl58	chr11	protein_coding	mitochondrial ribosomal protein L58
chr11	115297413	115300886	+	115297413	115300306	3pMXE	0.5	50	50	ENSMUST00000128632.8	ENSMUSG00000018858.16	Mrpl58	chr11	protein_coding	mitochondrial ribosomal protein L58
chr11	115294913	115300306	+	115294786	115300306	A5SS	0.33	50	50	ENSMUST00000122946.8	ENSMUSG00000018858.16	Mrpl58	chr11	protein_coding	mitochondrial ribosomal protein L58
chr11	115294786	115297377	+	115294786	115301464	A3SS	0.33	50	50	ENSMUST00000133192.2	ENSMUSG00000018858.16	Mrpl58	chr11	protein_coding	mitochondrial ribosomal protein L58
chr11	115294786	115300306	+	115294786	115301464	A3SS	0.33	50	50	ENSMUST00000133192.2	ENSMUSG00000018858.16	Mrpl58	chr11	protein_coding	mitochondrial ribosomal protein L58
chr11	115297413	115300886	+	115300365	115300886	A5SS&ES	0.5	50	50	ENSMUST00000021079.14	ENSMUSG00000018858.16	Mrpl58	chr11	protein_coding	mitochondrial ribosomal protein L58
chr11	115309342	115310718	-	115309342;115310119	115310018;115310718	ES	0.33	50	50	ENSMUST00000106537.8	ENSMUSG00000034566.11	Atp5h	chr11	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit D
chr11	115309376	115310718	-	115310119	115310718	A3SS&ES	0.33	50	50	ENSMUST00000106537.8	ENSMUSG00000034566.11	Atp5h	chr11	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit D
chr11	115309342	115309525	-	115309342	115310018	A5SS	0.33	50	50	ENSMUST00000106537.8	ENSMUSG00000034566.11	Atp5h	chr11	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit D
chr11	115309376	115310718	-	115309342	115310718	A3SS	0.33	50	50	ENSMUST00000043931.9	ENSMUSG00000034566.11	Atp5h	chr11	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit D
chr11	115309342	115309525	-	115309342	115310718	A5SS	0.33	50	50	ENSMUST00000043931.9	ENSMUSG00000034566.11	Atp5h	chr11	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit D
chr11	115320231	115320461	+	115320231	115321139	A3SS	0.33	50	50	ENSMUST00000103035.10	ENSMUSG00000016940.19	Kctd2	chr11	protein_coding	potassium channel tetramerisation domain containing 2
chr11	115320231	115320712	+	115320231	115321139	A3SS	0.33	50	50	ENSMUST00000103035.10	ENSMUSG00000016940.19	Kctd2	chr11	protein_coding	potassium channel tetramerisation domain containing 2
chr11	115320231;115320608	115320461;115320712	+	115320231	115320712	cassetteExon	0.5	100	100	ENSMUST00000123345.2	ENSMUSG00000016940.19	Kctd2	chr11	protein_coding	potassium channel tetramerisation domain containing 2
chr11	115353633;115355883	115355740;115363497	+	115353633	115363497	cassetteExon	0.5	100	100	ENSMUST00000106532.4	ENSMUSG00000045775.16	Slc16a5	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 5
chr11	115360974	115363497	+	115353633	115363497	A5SS	0.33	50	50	ENSMUST00000106532.4	ENSMUSG00000045775.16	Slc16a5	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 5
chr11	115355883	115363497	+	115355883;115360974	115360162;115363497	ES	0.33	50	50	ENSMUST00000092445.12	ENSMUSG00000045775.16	Slc16a5	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 5
chr11	115355883	115360059	+	115355883	115360162	A3SS	0.33	50	50	ENSMUST00000092445.12	ENSMUSG00000045775.16	Slc16a5	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 5
chr11	115354797	115355740	+	115353633	115355740	A5SS	0.33	50	50	ENSMUST00000092445.12	ENSMUSG00000045775.16	Slc16a5	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 5
chr11	115354858	115355740	+	115353633	115355740	A5SS	0.33	50	50	ENSMUST00000092445.12	ENSMUSG00000045775.16	Slc16a5	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 5
chr11	115355883	115363497	+	115355883	115360059	3pMXE	0.33	50	50	ENSMUST00000153466.2	ENSMUSG00000045775.16	Slc16a5	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 5
chr11	115355883	115363497	+	115355883	115360162	3pMXE	0.33	50	50	ENSMUST00000125251.8	ENSMUSG00000045775.16	Slc16a5	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 5
chr11	115354858	115355740	+	115354797	115355740	A5SS	0.33	50	50	ENSMUST00000133636.8	ENSMUSG00000045775.16	Slc16a5	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 5
chr11	115360974	115363497	+	115355883	115363497	A5SS	0.5	50	50	ENSMUST00000133636.8	ENSMUSG00000045775.16	Slc16a5	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 5
chr11	115355883	115363497	+	115355883;115360974	115360059;115363497	ES	0.5	50	50	ENSMUST00000140739.2	ENSMUSG00000045775.16	Slc16a5	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 5
chr11	115367091	115374069	+	115367091	115379539	A3SS	0.33	50	50	ENSMUST00000035240.7	ENSMUSG00000057219.12	Armc7	chr11	protein_coding	armadillo repeat containing 7
chr11	115367091	115375933	+	115367091	115379539	A3SS	0.33	50	50	ENSMUST00000035240.7	ENSMUSG00000057219.12	Armc7	chr11	protein_coding	armadillo repeat containing 7
chr11	115367091	115375933	+	115367091	115374069	3pMXE	0.33	50	50	ENSMUST00000136985.8	ENSMUSG00000057219.12	Armc7	chr11	protein_coding	armadillo repeat containing 7
chr11	115381570	115381679	-	115381595	115381679	A3SS	0.5	50	50	ENSMUST00000106530.8	ENSMUSG00000020736.13	Nt5c	chr11	protein_coding	5',3'-nucleotidase, cytosolic
chr11	115391549	115392831	-	115391510	115392831	A3SS	0.5	50	50	ENSMUST00000021083.7	ENSMUSG00000020737.13	Jpt1	chr11	protein_coding	Jupiter microtubule associated homolog 1
chr11	115394000	115404524	-	115394000	115405046	A5SS	0.33	50	50	ENSMUST00000021083.7	ENSMUSG00000020737.13	Jpt1	chr11	protein_coding	Jupiter microtubule associated homolog 1
chr11	115394000	115404853	-	115394000	115405046	A5SS	0.33	50	50	ENSMUST00000021083.7	ENSMUSG00000020737.13	Jpt1	chr11	protein_coding	Jupiter microtubule associated homolog 1
chr11	115394000	115404524	-	115394000	115404853	A5SS	0.33	50	50	ENSMUST00000139980.8	ENSMUSG00000020737.13	Jpt1	chr11	protein_coding	Jupiter microtubule associated homolog 1
chr11	115414595	115425378	-	115414595;115421243	115421172;115425378	ES	0.5	50	50	ENSMUST00000121185.8	ENSMUSG00000020738.17	Sumo2	chr11	protein_coding	small ubiquitin-like modifier 2
chr11	115425509	115426924	-	115425509	115426605	5pMXE	0.33	50	50	ENSMUST00000121185.8	ENSMUSG00000020738.17	Sumo2	chr11	protein_coding	small ubiquitin-like modifier 2
chr11	115425509;115425971	115425896;115426605	-	115425509	115426605	cassetteExon	0.5	100	100	ENSMUST00000121185.8	ENSMUSG00000020738.17	Sumo2	chr11	protein_coding	small ubiquitin-like modifier 2
chr11	115421243	115425382	-	115421243	115425378	A5SS	0.5	50	50	ENSMUST00000121185.8	ENSMUSG00000020738.17	Sumo2	chr11	protein_coding	small ubiquitin-like modifier 2
chr11	115425509	115425896	-	115425509	115426924	A5SS	0.33	50	50	ENSMUST00000118155.8	ENSMUSG00000020738.17	Sumo2	chr11	protein_coding	small ubiquitin-like modifier 2
chr11	115414595	115425378	-	115414595	115421172	A5SS&ES	0.5	50	50	ENSMUST00000021084.10	ENSMUSG00000020738.17	Sumo2	chr11	protein_coding	small ubiquitin-like modifier 2
chr11	115414595	115425378	-	115421243	115425378	3pMXE	0.5	50	50	ENSMUST00000140844.2	ENSMUSG00000020738.17	Sumo2	chr11	protein_coding	small ubiquitin-like modifier 2
chr11	115468890	115469315	+	115468890;115469112	115468990;115469315	ES	0.5	50	50	ENSMUST00000021085.11	ENSMUSG00000020739.12	Nup85	chr11	protein_coding	nucleoporin 85
chr11	115469722	115471556	+	115469722;115471413	115471330;115471556	ES	0.5	50	50	ENSMUST00000021085.11	ENSMUSG00000020739.12	Nup85	chr11	protein_coding	nucleoporin 85
chr11	115469722	115471556	+	115471413	115471556	5pMXE	0.5	50	50	ENSMUST00000143351.2	ENSMUSG00000020739.12	Nup85	chr11	protein_coding	nucleoporin 85
chr11	115478829	115479682	-	115478829;115479371	115479138;115479682	ES	0.5	50	50	ENSMUST00000019135.14	ENSMUSG00000020740.14	Gga3	chr11	protein_coding	golgi associated, gamma adaptin ear containing, ARF binding protein 3
chr11	115481793	115482456	-	115481793;115482192	115482089;115482456	ES	0.5	50	50	ENSMUST00000019135.14	ENSMUSG00000020740.14	Gga3	chr11	protein_coding	golgi associated, gamma adaptin ear containing, ARF binding protein 3
chr11	115482579	115485532	-	115482579;115483356	115483258;115485532	ES	0.33	50	50	ENSMUST00000019135.14	ENSMUSG00000020740.14	Gga3	chr11	protein_coding	golgi associated, gamma adaptin ear containing, ARF binding protein 3
chr11	115485819;115486263	115486080;115494654	-	115485819	115494654	cassetteExon	0.5	100	100	ENSMUST00000019135.14	ENSMUSG00000020740.14	Gga3	chr11	protein_coding	golgi associated, gamma adaptin ear containing, ARF binding protein 3
chr11	115477246	115477822	-	115477311	115477822	A3SS	0.5	50	50	ENSMUST00000019135.14	ENSMUSG00000020740.14	Gga3	chr11	protein_coding	golgi associated, gamma adaptin ear containing, ARF binding protein 3
chr11	115477834	115478232	-	115478027	115478232	A3SS	0.5	50	50	ENSMUST00000019135.14	ENSMUSG00000020740.14	Gga3	chr11	protein_coding	golgi associated, gamma adaptin ear containing, ARF binding protein 3
chr11	115478438	115485532	-	115483356	115485532	A3SS&ES	0.33	50	50	ENSMUST00000019135.14	ENSMUSG00000020740.14	Gga3	chr11	protein_coding	golgi associated, gamma adaptin ear containing, ARF binding protein 3
chr11	115482520	115483258	-	115482579	115483258	A3SS	0.5	50	50	ENSMUST00000019135.14	ENSMUSG00000020740.14	Gga3	chr11	protein_coding	golgi associated, gamma adaptin ear containing, ARF binding protein 3
chr11	115478542	115478785	-	115478542	115478762	A5SS	0.5	50	50	ENSMUST00000019135.14	ENSMUSG00000020740.14	Gga3	chr11	protein_coding	golgi associated, gamma adaptin ear containing, ARF binding protein 3
chr11	115485819	115494378	-	115485819	115494654	A5SS	0.33	50	50	ENSMUST00000019135.14	ENSMUSG00000020740.14	Gga3	chr11	protein_coding	golgi associated, gamma adaptin ear containing, ARF binding protein 3
chr11	115478829	115479682	-	115479371	115479682	A3SS	0.5	50	50	ENSMUST00000154832.2	ENSMUSG00000020740.14	Gga3	chr11	protein_coding	golgi associated, gamma adaptin ear containing, ARF binding protein 3
chr11	115482579	115485532	-	115478438	115485532	A3SS	0.33	50	50	ENSMUST00000128437.8	ENSMUSG00000020740.14	Gga3	chr11	protein_coding	golgi associated, gamma adaptin ear containing, ARF binding protein 3
chr11	115482579	115485532	-	115483356	115485532	A3SS&ES	0.5	50	50	ENSMUST00000125097.2	ENSMUSG00000020740.14	Gga3	chr11	protein_coding	golgi associated, gamma adaptin ear containing, ARF binding protein 3
chr11	115485819	115486080	-	115485819	115494378	A5SS	0.33	50	50	ENSMUST00000149814.8	ENSMUSG00000020740.14	Gga3	chr11	protein_coding	golgi associated, gamma adaptin ear containing, ARF binding protein 3
chr11	115500474;115501308	115501243;115502729	-	115500474	115502729	cassetteExon	0.5	100	100	ENSMUST00000106507.9	ENSMUSG00000020743.16	Mif4gd	chr11	protein_coding	MIF4G domain containing
chr11	115499922	115500106	-	115499979	115500106	A3SS	0.5	50	50	ENSMUST00000106507.9	ENSMUSG00000020743.16	Mif4gd	chr11	protein_coding	MIF4G domain containing
chr11	115500415	115502729	-	115500474	115502729	A3SS	0.33	50	50	ENSMUST00000106507.9	ENSMUSG00000020743.16	Mif4gd	chr11	protein_coding	MIF4G domain containing
chr11	115503090	115503611	-	115502860	115503611	A3SS	0.5	50	50	ENSMUST00000124407.8	ENSMUSG00000020743.16	Mif4gd	chr11	protein_coding	MIF4G domain containing
chr11	115499922	115500106	-	115499922	115500197	A5SS	0.5	50	50	ENSMUST00000124407.8	ENSMUSG00000020743.16	Mif4gd	chr11	protein_coding	MIF4G domain containing
chr11	115501308	115502729	-	115500415	115502729	A3SS	0.33	50	50	ENSMUST00000137304.8	ENSMUSG00000020743.16	Mif4gd	chr11	protein_coding	MIF4G domain containing
chr11	115507477	115511703	-	115507477;115508527	115508344;115511703	ES	0.5	50	50	ENSMUST00000021089.11	ENSMUSG00000020744.14	Slc25a19	chr11	protein_coding	solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
chr11	115514853	115518891	-	115514853;115515194	115515025;115518891	ES	0.2	50	50	ENSMUST00000021089.11	ENSMUSG00000020744.14	Slc25a19	chr11	protein_coding	solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
chr11	115511873;115514418	115514244;115514698	-	115511873	115514698	cassetteExon	0.5	100	100	ENSMUST00000021089.11	ENSMUSG00000020744.14	Slc25a19	chr11	protein_coding	solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
chr11	115515194;115518625	115518463;115518891	-	115515194	115518891	cassetteExon	0.5	100	100	ENSMUST00000021089.11	ENSMUSG00000020744.14	Slc25a19	chr11	protein_coding	solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
chr11	115515194;115518699	115518463;115518891	-	115515194	115518891	cassetteExon	0.5	100	100	ENSMUST00000021089.11	ENSMUSG00000020744.14	Slc25a19	chr11	protein_coding	solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
chr11	115515194;115518755	115518463;115518891	-	115515194	115518891	cassetteExon	0.5	100	100	ENSMUST00000021089.11	ENSMUSG00000020744.14	Slc25a19	chr11	protein_coding	solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
chr11	115511873	115513464	-	115511873	115514698	A5SS	0.33	50	50	ENSMUST00000021089.11	ENSMUSG00000020744.14	Slc25a19	chr11	protein_coding	solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
chr11	115518699	115518891	-	115518625	115518891	A3SS	0.2	50	50	ENSMUST00000178003.8	ENSMUSG00000020744.14	Slc25a19	chr11	protein_coding	solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
chr11	115518755	115518891	-	115518625	115518891	A3SS	0.2	50	50	ENSMUST00000178003.8	ENSMUSG00000020744.14	Slc25a19	chr11	protein_coding	solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
chr11	115511873	115514244	-	115511873	115513464	5pMXE	0.33	50	50	ENSMUST00000135552.2	ENSMUSG00000020744.14	Slc25a19	chr11	protein_coding	solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
chr11	115507477	115511703	-	115507477	115508344	5pMXE	0.5	50	50	ENSMUST00000129194.2	ENSMUSG00000020744.14	Slc25a19	chr11	protein_coding	solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
chr11	115507477	115511703	-	115508527	115511703	3pMXE	0.5	50	50	ENSMUST00000144083.8	ENSMUSG00000020744.14	Slc25a19	chr11	protein_coding	solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
chr11	115511873	115514698	-	115514418	115514698	3pMXE	0.5	50	50	ENSMUST00000150898.8	ENSMUSG00000020744.14	Slc25a19	chr11	protein_coding	solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
chr11	115518625	115518891	-	115514853	115518891	A3SS	0.2	50	50	ENSMUST00000134171.2	ENSMUSG00000020744.14	Slc25a19	chr11	protein_coding	solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
chr11	115518699	115518891	-	115514853	115518891	A3SS	0.2	50	50	ENSMUST00000134171.2	ENSMUSG00000020744.14	Slc25a19	chr11	protein_coding	solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
chr11	115518755	115518891	-	115514853	115518891	A3SS	0.2	50	50	ENSMUST00000134171.2	ENSMUSG00000020744.14	Slc25a19	chr11	protein_coding	solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
chr11	115518755	115518891	-	115518699	115518891	A3SS	0.25	50	50	ENSMUST00000141614.3	ENSMUSG00000020744.14	Slc25a19	chr11	protein_coding	solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
chr11	115515194	115518891	-	115515194	115518463	5pMXE	0.5	50	50	ENSMUST00000154623.2	ENSMUSG00000020744.14	Slc25a19	chr11	protein_coding	solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
chr11	115537704;115540719	115540597;115546184	-	115537704	115546184	cassetteExon	0.5	100	100	ENSMUST00000106499.8	ENSMUSG00000059923.14	Grb2	chr11	protein_coding	growth factor receptor bound protein 2
chr11	115536738	115537536	-	115536780	115537536	A3SS	0.5	50	50	ENSMUST00000106499.8	ENSMUSG00000059923.14	Grb2	chr11	protein_coding	growth factor receptor bound protein 2
chr11	115590182	115590726	-	115590182	115599220	A5SS	0.5	50	50	ENSMUST00000021090.14	ENSMUSG00000059923.14	Grb2	chr11	protein_coding	growth factor receptor bound protein 2
chr11	115537704	115546184	-	115540719	115546184	3pMXE	0.5	50	50	ENSMUST00000135065.2	ENSMUSG00000059923.14	Grb2	chr11	protein_coding	growth factor receptor bound protein 2
chr11	115676385	115677006	+	115676385	115676641	A3SS&ES	0.5	50	50	ENSMUST00000093912.11	ENSMUSG00000020747.19	Tmem94	chr11	protein_coding	transmembrane protein 94
chr11	115681160	115681859	+	115681160	115681793	A3SS	0.5	50	50	ENSMUST00000093912.11	ENSMUSG00000020747.19	Tmem94	chr11	protein_coding	transmembrane protein 94
chr11	115667247	115668074	+	115656379	115668074	A5SS	0.5	50	50	ENSMUST00000093912.11	ENSMUSG00000020747.19	Tmem94	chr11	protein_coding	transmembrane protein 94
chr11	115671793	115676266	+	115668203	115676266	A5SS	0.5	50	50	ENSMUST00000093912.11	ENSMUSG00000020747.19	Tmem94	chr11	protein_coding	transmembrane protein 94
chr11	115656318	115668125	+	115656313	115668125	A5SS	0.33	50	50	ENSMUST00000136720.8	ENSMUSG00000020747.19	Tmem94	chr11	protein_coding	transmembrane protein 94
chr11	115657774	115668125	+	115656313	115668125	A5SS	0.33	50	50	ENSMUST00000136720.8	ENSMUSG00000020747.19	Tmem94	chr11	protein_coding	transmembrane protein 94
chr11	115657774	115668125	+	115656318	115668125	A5SS	0.33	50	50	ENSMUST00000141871.8	ENSMUSG00000020747.19	Tmem94	chr11	protein_coding	transmembrane protein 94
chr11	115703208;115703770	115703718;115704340	-	115703208	115704340	cassetteExon	0.5	100	100	ENSMUST00000041684.11	ENSMUSG00000034471.13	Caskin2	chr11	protein_coding	CASK-interacting protein 2
chr11	115698716	115698826	-	115698716	115702713	A5SS	0.5	50	50	ENSMUST00000041684.11	ENSMUSG00000034471.13	Caskin2	chr11	protein_coding	CASK-interacting protein 2
chr11	115707931	115711205	+	115707931;115711049	115710951;115711205	ES	0.5	50	50	ENSMUST00000021134.10	ENSMUSG00000020781.15	Tsen54	chr11	protein_coding	tRNA splicing endonuclease subunit 54
chr11	115712542	115713409	+	115712542;115712941	115712825;115713409	ES	0.33	50	50	ENSMUST00000021134.10	ENSMUSG00000020781.15	Tsen54	chr11	protein_coding	tRNA splicing endonuclease subunit 54
chr11	115712921	115713409	+	115712941	115713409	A5SS	0.33	50	50	ENSMUST00000021134.10	ENSMUSG00000020781.15	Tsen54	chr11	protein_coding	tRNA splicing endonuclease subunit 54
chr11	115712542;115712921	115712825;115713409	+	115712542	115713409	cassetteExon	0.5	100	100	ENSMUST00000106481.9	ENSMUSG00000020781.15	Tsen54	chr11	protein_coding	tRNA splicing endonuclease subunit 54
chr11	115712542	115713409	+	115712542	115712825	3pMXE	0.5	50	50	ENSMUST00000157061.2	ENSMUSG00000020781.15	Tsen54	chr11	protein_coding	tRNA splicing endonuclease subunit 54
chr11	115745401	115745889	+	115745401;115745685	115745638;115745889	ES	0.5	50	50	ENSMUST00000103032.11	ENSMUSG00000020782.19	Llgl2	chr11	protein_coding	LLGL2 scribble cell polarity complex component
chr11	115715003;115723744	115723488;115725623	+	115715003	115725623	cassetteExon	0.5	100	100	ENSMUST00000103032.11	ENSMUSG00000020782.19	Llgl2	chr11	protein_coding	LLGL2 scribble cell polarity complex component
chr11	115745401	115745558	+	115745401	115745638	A3SS	0.33	50	50	ENSMUST00000103032.11	ENSMUSG00000020782.19	Llgl2	chr11	protein_coding	LLGL2 scribble cell polarity complex component
chr11	115723008	115725623	+	115715003	115725623	A5SS	0.16	50	50	ENSMUST00000103032.11	ENSMUSG00000020782.19	Llgl2	chr11	protein_coding	LLGL2 scribble cell polarity complex component
chr11	115724878	115725623	+	115715003	115725623	A5SS	0.16	50	50	ENSMUST00000103032.11	ENSMUSG00000020782.19	Llgl2	chr11	protein_coding	LLGL2 scribble cell polarity complex component
chr11	115725191	115725623	+	115715003	115725623	A5SS	0.16	50	50	ENSMUST00000103032.11	ENSMUSG00000020782.19	Llgl2	chr11	protein_coding	LLGL2 scribble cell polarity complex component
chr11	115725305	115725623	+	115715003	115725623	A5SS	0.16	50	50	ENSMUST00000103032.11	ENSMUSG00000020782.19	Llgl2	chr11	protein_coding	LLGL2 scribble cell polarity complex component
chr11	115742056	115742943	+	115741984	115742943	A5SS	0.5	50	50	ENSMUST00000103032.11	ENSMUSG00000020782.19	Llgl2	chr11	protein_coding	LLGL2 scribble cell polarity complex component
chr11	115723008	115725623	+	115723744	115725623	A5SS&ES	0.16	50	50	ENSMUST00000133250.8	ENSMUSG00000020782.19	Llgl2	chr11	protein_coding	LLGL2 scribble cell polarity complex component
chr11	115724878	115725623	+	115723744	115725623	A5SS	0.16	50	50	ENSMUST00000133250.8	ENSMUSG00000020782.19	Llgl2	chr11	protein_coding	LLGL2 scribble cell polarity complex component
chr11	115725191	115725623	+	115723744	115725623	A5SS	0.16	50	50	ENSMUST00000133250.8	ENSMUSG00000020782.19	Llgl2	chr11	protein_coding	LLGL2 scribble cell polarity complex component
chr11	115725305	115725623	+	115723744	115725623	A5SS	0.16	50	50	ENSMUST00000133250.8	ENSMUSG00000020782.19	Llgl2	chr11	protein_coding	LLGL2 scribble cell polarity complex component
chr11	115724878	115725623	+	115723008	115725623	A5SS	0.16	50	50	ENSMUST00000172552.8	ENSMUSG00000020782.19	Llgl2	chr11	protein_coding	LLGL2 scribble cell polarity complex component
chr11	115725191	115725623	+	115723008	115725623	A5SS	0.16	50	50	ENSMUST00000172552.8	ENSMUSG00000020782.19	Llgl2	chr11	protein_coding	LLGL2 scribble cell polarity complex component
chr11	115725305	115725623	+	115723008	115725623	A5SS	0.16	50	50	ENSMUST00000172552.8	ENSMUSG00000020782.19	Llgl2	chr11	protein_coding	LLGL2 scribble cell polarity complex component
chr11	115725191	115725623	+	115724878	115725623	A5SS	0.16	50	50	ENSMUST00000155878.8	ENSMUSG00000020782.19	Llgl2	chr11	protein_coding	LLGL2 scribble cell polarity complex component
chr11	115725305	115725623	+	115724878	115725623	A5SS	0.16	50	50	ENSMUST00000155878.8	ENSMUSG00000020782.19	Llgl2	chr11	protein_coding	LLGL2 scribble cell polarity complex component
chr11	115725191	115725623	+	115725305	115725623	A5SS	0.16	50	50	ENSMUST00000173289.8	ENSMUSG00000020782.19	Llgl2	chr11	protein_coding	LLGL2 scribble cell polarity complex component
chr11	115745401	115745889	+	115745401	115745558	3pMXE	0.33	50	50	ENSMUST00000130518.2	ENSMUSG00000020782.19	Llgl2	chr11	protein_coding	LLGL2 scribble cell polarity complex component
chr11	115745401;115745685	115745558;115745889	+	115745401	115745889	cassetteExon	0.5	100	100	ENSMUST00000128826.2	ENSMUSG00000020782.19	Llgl2	chr11	protein_coding	LLGL2 scribble cell polarity complex component
chr11	115768621	115769138	+	115768621;115768981	115768924;115769138	ES	0.5	50	50	ENSMUST00000093911.11	ENSMUSG00000034427.18	Myo15b	chr11	protein_coding	myosin XVB
chr11	115768391	115768571	+	115767919	115768571	A5SS	0.5	50	50	ENSMUST00000093911.11	ENSMUSG00000034427.18	Myo15b	chr11	protein_coding	myosin XVB
chr11	115778191	115778391	+	115778030	115778391	A5SS	0.5	50	50	ENSMUST00000093911.11	ENSMUSG00000034427.18	Myo15b	chr11	protein_coding	myosin XVB
chr11	115778768	115778848	+	115778756	115778848	A5SS	0.5	50	50	ENSMUST00000093911.11	ENSMUSG00000034427.18	Myo15b	chr11	protein_coding	myosin XVB
chr11	115788085;115795868	115795711;115807805	-	115788085	115807805	cassetteExon	0.5	100	100	ENSMUST00000021097.10	ENSMUSG00000020752.12	Recql5	chr11	protein_coding	RecQ protein-like 5
chr11	115807322	115807805	-	115788085	115807805	A3SS	0.33	50	50	ENSMUST00000021097.10	ENSMUSG00000020752.12	Recql5	chr11	protein_coding	RecQ protein-like 5
chr11	115818970	115821503	-	115819312	115821503	A3SS	0.5	50	50	ENSMUST00000021097.10	ENSMUSG00000020752.12	Recql5	chr11	protein_coding	RecQ protein-like 5
chr11	115788085	115798009	-	115788085	115807805	A5SS	0.33	50	50	ENSMUST00000021097.10	ENSMUSG00000020752.12	Recql5	chr11	protein_coding	RecQ protein-like 5
chr11	115807322	115807805	-	115795868	115807805	A3SS	0.33	50	50	ENSMUST00000131578.8	ENSMUSG00000020752.12	Recql5	chr11	protein_coding	RecQ protein-like 5
chr11	115788085	115798009	-	115788085	115795711	A5SS&ES	0.33	50	50	ENSMUST00000131578.8	ENSMUSG00000020752.12	Recql5	chr11	protein_coding	RecQ protein-like 5
chr11	115791168;115793969	115793813;115795981	+	115791168	115795981	cassetteExon	0.5	100	100	ENSMUST00000152171.8	ENSMUSG00000048442.16	Smim5	chr11	protein_coding	small integral membrane protein 5
chr11	115824607	115828836	+	115824607;115826301	115826192;115828836	ES	0.5	50	50	ENSMUST00000140991.2	ENSMUSG00000020755.10	Sap30bp	chr11	protein_coding	SAP30 binding protein
chr11	115851417	115852565	+	115851417;115852242	115852182;115852565	ES	0.5	50	50	ENSMUST00000140991.2	ENSMUSG00000020755.10	Sap30bp	chr11	protein_coding	SAP30 binding protein
chr11	115828883	115829181	+	115828883	115842793	A3SS	0.5	50	50	ENSMUST00000140991.2	ENSMUSG00000020755.10	Sap30bp	chr11	protein_coding	SAP30 binding protein
chr11	115896593	115897287	+	115896593;115896881	115896723;115897287	ES	0.5	50	50	ENSMUST00000021107.14	ENSMUSG00000020758.16	Itgb4	chr11	protein_coding	integrin beta 4
chr11	115894560;115895924	115895730;115896357	+	115894560	115896357	cassetteExon	0.5	100	100	ENSMUST00000021107.14	ENSMUSG00000020758.16	Itgb4	chr11	protein_coding	integrin beta 4
chr11	115879845	115880545	+	115879845	115880548	A3SS	0.5	50	50	ENSMUST00000021107.14	ENSMUSG00000020758.16	Itgb4	chr11	protein_coding	integrin beta 4
chr11	115880964	115881501	+	115880870	115881501	A5SS	0.5	50	50	ENSMUST00000021107.14	ENSMUSG00000020758.16	Itgb4	chr11	protein_coding	integrin beta 4
chr11	115888980	115890624	+	115888971	115890624	A5SS	0.5	50	50	ENSMUST00000021107.14	ENSMUSG00000020758.16	Itgb4	chr11	protein_coding	integrin beta 4
chr11	115947205	115949815	+	115947205;115949250	115949069;115949815	ES	0.5	50	50	ENSMUST00000021116.12	ENSMUSG00000020770.14	Unk	chr11	protein_coding	unkempt family zinc finger
chr11	115921317;115929609	115929366;115938503	+	115921317	115938503	cassetteExon	0.5	100	100	ENSMUST00000021116.12	ENSMUSG00000020770.14	Unk	chr11	protein_coding	unkempt family zinc finger
chr11	115943945	115944316	+	115943984	115944316	A5SS	0.5	50	50	ENSMUST00000021116.12	ENSMUSG00000020770.14	Unk	chr11	protein_coding	unkempt family zinc finger
chr11	115929609	115938503	+	115929609	115931819	3pMXE	0.5	50	50	ENSMUST00000176788.2	ENSMUSG00000020770.14	Unk	chr11	protein_coding	unkempt family zinc finger
chr11	115921317	115938503	+	115929609	115938503	5pMXE	0.5	50	50	ENSMUST00000150759.8	ENSMUSG00000020770.14	Unk	chr11	protein_coding	unkempt family zinc finger
chr11	115956373	115957463	-	115956373	115957516	A5SS	0.5	50	50	ENSMUST00000106450.8	ENSMUSG00000057948.13	Unc13d	chr11	protein_coding	unc-13 homolog D
chr11	115960625	115960713	-	115960625	115960707	A5SS	0.5	50	50	ENSMUST00000106450.8	ENSMUSG00000057948.13	Unc13d	chr11	protein_coding	unc-13 homolog D
chr11	115967613	115967733	-	115967613	115968274	A5SS	0.5	50	50	ENSMUST00000106450.8	ENSMUSG00000057948.13	Unc13d	chr11	protein_coding	unc-13 homolog D
chr11	115971170	115972058	-	115971170;115971506	115971372;115972058	ES	0.5	50	50	ENSMUST00000074628.13	ENSMUSG00000034341.18	Wbp2	chr11	protein_coding	WW domain binding protein 2
chr11	115997832	115998250	-	115997829	115998250	A3SS	0.5	50	50	ENSMUST00000141531.8	ENSMUSG00000020773.12	Trim47	chr11	protein_coding	tripartite motif-containing 47
chr11	115999187	116017291	-	115999187	116000360	5pMXE	0.5	50	50	ENSMUST00000106441.8	ENSMUSG00000020773.12	Trim47	chr11	protein_coding	tripartite motif-containing 47
chr11	116015422	116017291	-	115999187	116017291	A3SS	0.5	50	50	ENSMUST00000133039.2	ENSMUSG00000020773.12	Trim47	chr11	protein_coding	tripartite motif-containing 47
chr11	116046861	116048515	-	116046861;116048324	116048118;116048515	ES	0.5	50	50	ENSMUST00000136318.8	ENSMUSG00000020776.19	Fbf1	chr11	protein_coding	Fas (TNFRSF6) binding factor 1
chr11	116048653	116049715	-	116048653;116048985	116048846;116049715	ES	0.5	50	50	ENSMUST00000136318.8	ENSMUSG00000020776.19	Fbf1	chr11	protein_coding	Fas (TNFRSF6) binding factor 1
chr11	116055516	116058378	-	116055516;116056738	116056658;116058378	ES	0.33	50	50	ENSMUST00000136318.8	ENSMUSG00000020776.19	Fbf1	chr11	protein_coding	Fas (TNFRSF6) binding factor 1
chr11	116052335;116053391	116053165;116054144	-	116052335	116054144	cassetteExon	0.5	100	100	ENSMUST00000136318.8	ENSMUSG00000020776.19	Fbf1	chr11	protein_coding	Fas (TNFRSF6) binding factor 1
chr11	116056738;116058054	116057959;116058378	-	116056738	116058378	cassetteExon	0.5	100	100	ENSMUST00000136318.8	ENSMUSG00000020776.19	Fbf1	chr11	protein_coding	Fas (TNFRSF6) binding factor 1
chr11	116043773	116044779	-	116043770	116044779	A3SS	0.5	50	50	ENSMUST00000136318.8	ENSMUSG00000020776.19	Fbf1	chr11	protein_coding	Fas (TNFRSF6) binding factor 1
chr11	116046334	116046784	-	116046326	116046784	A3SS	0.5	50	50	ENSMUST00000136318.8	ENSMUSG00000020776.19	Fbf1	chr11	protein_coding	Fas (TNFRSF6) binding factor 1
chr11	116055516	116058378	-	116055516	116056658	5pMXE	0.5	50	50	ENSMUST00000106435.9	ENSMUSG00000020776.19	Fbf1	chr11	protein_coding	Fas (TNFRSF6) binding factor 1
chr11	116046861	116048515	-	116046861	116048118	5pMXE	0.5	50	50	ENSMUST00000150703.8	ENSMUSG00000020776.19	Fbf1	chr11	protein_coding	Fas (TNFRSF6) binding factor 1
chr11	116058054	116058388	-	116058054	116058378	A5SS	0.5	50	50	ENSMUST00000124828.8	ENSMUSG00000020776.19	Fbf1	chr11	protein_coding	Fas (TNFRSF6) binding factor 1
chr11	116058054	116058378	-	116055516	116058378	A3SS	0.33	50	50	ENSMUST00000148350.2	ENSMUSG00000020776.19	Fbf1	chr11	protein_coding	Fas (TNFRSF6) binding factor 1
chr11	116056738	116058378	-	116056738	116057959	A5SS&ES	0.5	50	50	ENSMUST00000139020.2	ENSMUSG00000020776.19	Fbf1	chr11	protein_coding	Fas (TNFRSF6) binding factor 1
chr11	116069670;116070603	116070434;116071117	-	116069670	116071117	cassetteExon	0.5	100	100	ENSMUST00000130229.8	ENSMUSG00000020777.17	Acox1	chr11	protein_coding	acyl-Coenzyme A oxidase 1, palmitoyl
chr11	116072846	116080241	-	116072846;116074450	116074290;116080241	ES	0.5	50	50	ENSMUST00000148601.2	ENSMUSG00000020777.17	Acox1	chr11	protein_coding	acyl-Coenzyme A oxidase 1, palmitoyl
chr11	116074450	116089048	-	116074450	116080241	5pMXE	0.5	50	50	ENSMUST00000148601.2	ENSMUSG00000020777.17	Acox1	chr11	protein_coding	acyl-Coenzyme A oxidase 1, palmitoyl
chr11	116072846;116074450	116074290;116089048	-	116072846;116080401	116080241;116089048	MXE	0.5	100	100	ENSMUST00000072948.11	ENSMUSG00000020777.17	Acox1	chr11	protein_coding	acyl-Coenzyme A oxidase 1, palmitoyl
chr11	116074450;116080401	116080241;116089048	-	116074450	116089048	cassetteExon	0.5	100	100	ENSMUST00000066587.12	ENSMUSG00000020777.17	Acox1	chr11	protein_coding	acyl-Coenzyme A oxidase 1, palmitoyl
chr11	116069670	116071117	-	116070603	116071117	3pMXE	0.5	50	50	ENSMUST00000128793.2	ENSMUSG00000020777.17	Acox1	chr11	protein_coding	acyl-Coenzyme A oxidase 1, palmitoyl
chr11	116074450	116089048	-	116080401	116089048	3pMXE	0.5	50	50	ENSMUST00000124684.2	ENSMUSG00000020777.17	Acox1	chr11	protein_coding	acyl-Coenzyme A oxidase 1, palmitoyl
chr11	116101872	116105665	+	116096594	116105665	A5SS	0.33	50	50	ENSMUST00000021130.7	ENSMUSG00000020778.13	Ten1	chr11	protein_coding	TEN1 telomerase capping complex subunit
chr11	116089809	116105665	+	116089809	116095671	3pMXE	0.5	50	50	ENSMUST00000124663.2	ENSMUSG00000020778.13	Ten1	chr11	protein_coding	TEN1 telomerase capping complex subunit
chr11	116096594	116105665	+	116089809	116105665	A5SS	0.33	50	50	ENSMUST00000146066.8	ENSMUSG00000020778.13	Ten1	chr11	protein_coding	TEN1 telomerase capping complex subunit
chr11	116101872	116105665	+	116089809	116105665	A5SS	0.33	50	50	ENSMUST00000146066.8	ENSMUSG00000020778.13	Ten1	chr11	protein_coding	TEN1 telomerase capping complex subunit
chr11	116156378;116159213	116159100;116162739	-	116156378	116162739	cassetteExon	0.5	100	100	ENSMUST00000106425.4	ENSMUSG00000020780.16	Srp68	chr11	protein_coding	signal recognition particle 68
chr11	116137074	116145128	-	116143619	116145128	A3SS&ES	0.5	50	50	ENSMUST00000106425.4	ENSMUSG00000020780.16	Srp68	chr11	protein_coding	signal recognition particle 68
chr11	116151760	116151954	-	116151760	116152571	A5SS	0.5	50	50	ENSMUST00000106425.4	ENSMUSG00000020780.16	Srp68	chr11	protein_coding	signal recognition particle 68
chr11	116172676	116173221	+	116172676	116173737	A3SS	0.5	50	50	ENSMUST00000055872.3	ENSMUSG00000020793.6	Galr2	chr11	protein_coding	galanin receptor 2
chr11	116195874	116197440	-	116195874;116197279	116197214;116197440	ES	0.5	50	50	ENSMUST00000106411.10	ENSMUSG00000020792.16	Exoc7	chr11	protein_coding	exocyst complex component 7
chr11	116197279	116197715	-	116197279	116197440	5pMXE	0.5	50	50	ENSMUST00000106411.10	ENSMUSG00000020792.16	Exoc7	chr11	protein_coding	exocyst complex component 7
chr11	116183410;116184139	116184101;116184798	-	116183410	116184798	cassetteExon	0.5	100	100	ENSMUST00000106411.10	ENSMUSG00000020792.16	Exoc7	chr11	protein_coding	exocyst complex component 7
chr11	116186515;116187624	116187556;116191092	-	116186515	116191092	cassetteExon	0.5	100	100	ENSMUST00000106411.10	ENSMUSG00000020792.16	Exoc7	chr11	protein_coding	exocyst complex component 7
chr11	116186515;116188489	116188397;116191092	-	116186515	116191092	cassetteExon	0.5	100	100	ENSMUST00000106411.10	ENSMUSG00000020792.16	Exoc7	chr11	protein_coding	exocyst complex component 7
chr11	116186515;116187624	116187556;116191092	-	116186515;116188489	116188397;116191092	MXE	0.5	100	100	ENSMUST00000106413.10	ENSMUSG00000020792.16	Exoc7	chr11	protein_coding	exocyst complex component 7
chr11	116186515;116187706	116187556;116188397	-	116186515	116188397	cassetteExon	0.5	100	100	ENSMUST00000106413.10	ENSMUSG00000020792.16	Exoc7	chr11	protein_coding	exocyst complex component 7
chr11	116187624	116191092	-	116188489	116191092	A3SS&ES	0.33	50	50	ENSMUST00000139699.8	ENSMUSG00000020792.16	Exoc7	chr11	protein_coding	exocyst complex component 7
chr11	116186515	116191092	-	116186515	116188397	5pMXE	0.33	50	50	ENSMUST00000136417.2	ENSMUSG00000020792.16	Exoc7	chr11	protein_coding	exocyst complex component 7
chr11	116195874	116197440	-	116195874	116197214	A5SS&ES	0.5	50	50	ENSMUST00000124281.2	ENSMUSG00000020792.16	Exoc7	chr11	protein_coding	exocyst complex component 7
chr11	116236781	116238168	-	116236781;116237924	116237859;116238168	ES	0.5	50	50	ENSMUST00000149147.8	ENSMUSG00000052949.15	Rnf157	chr11	protein_coding	ring finger protein 157
chr11	116245303	116246271	-	116245303;116245621	116245462;116246271	ES	0.5	50	50	ENSMUST00000149147.8	ENSMUSG00000052949.15	Rnf157	chr11	protein_coding	ring finger protein 157
chr11	116249542	116250069	-	116249542	116249762	5pMXE	0.5	50	50	ENSMUST00000149147.8	ENSMUSG00000052949.15	Rnf157	chr11	protein_coding	ring finger protein 157
chr11	116229656;116231204	116231164;116235021	-	116229656	116235021	cassetteExon	0.5	100	100	ENSMUST00000149147.8	ENSMUSG00000052949.15	Rnf157	chr11	protein_coding	ring finger protein 157
chr11	116229656;116231204	116231164;116236733	-	116229656;116235131	116235021;116236733	MXE	0.5	100	100	ENSMUST00000149147.8	ENSMUSG00000052949.15	Rnf157	chr11	protein_coding	ring finger protein 157
chr11	116249542	116250069	-	116249542;116249805	116249762;116250069	ES	0.5	50	50	ENSMUST00000100202.10	ENSMUSG00000052949.15	Rnf157	chr11	protein_coding	ring finger protein 157
chr11	116295221	116303523	-	116287133	116303523	A3SS	0.5	50	50	ENSMUST00000100202.10	ENSMUSG00000052949.15	Rnf157	chr11	protein_coding	ring finger protein 157
chr11	116250135	116250284	-	116250135	116250639	A5SS	0.5	50	50	ENSMUST00000100202.10	ENSMUSG00000052949.15	Rnf157	chr11	protein_coding	ring finger protein 157
chr11	116253199	116278184	-	116253199	116287015	A5SS	0.5	50	50	ENSMUST00000100202.10	ENSMUSG00000052949.15	Rnf157	chr11	protein_coding	ring finger protein 157
chr11	116231204;116235131	116235021;116236733	-	116231204	116236733	cassetteExon	0.5	100	100	ENSMUST00000137264.2	ENSMUSG00000052949.15	Rnf157	chr11	protein_coding	ring finger protein 157
chr11	116378996	116384846	-	116378996	116380874	5pMXE	0.5	50	50	ENSMUST00000152874.8	ENSMUSG00000015869.17	Prpsap1	chr11	protein_coding	phosphoribosyl pyrophosphate synthetase-associated protein 1
chr11	116368941;116369466	116369351;116370478	-	116368941	116370478	cassetteExon	0.5	100	100	ENSMUST00000152874.8	ENSMUSG00000015869.17	Prpsap1	chr11	protein_coding	phosphoribosyl pyrophosphate synthetase-associated protein 1
chr11	116370665	116376695	-	116370650	116376695	A3SS	0.5	50	50	ENSMUST00000152874.8	ENSMUSG00000015869.17	Prpsap1	chr11	protein_coding	phosphoribosyl pyrophosphate synthetase-associated protein 1
chr11	116368941	116370478	-	116369466	116370478	3pMXE	0.5	50	50	ENSMUST00000130835.8	ENSMUSG00000015869.17	Prpsap1	chr11	protein_coding	phosphoribosyl pyrophosphate synthetase-associated protein 1
chr11	116426000	116426438	+	116426000;116426193	116426078;116426438	ES	0.5	50	50	ENSMUST00000106388.9	ENSMUSG00000061878.17	Sphk1	chr11	protein_coding	sphingosine kinase 1
chr11	116424999	116425678	+	116424999	116425675	A3SS	0.5	50	50	ENSMUST00000106388.9	ENSMUSG00000061878.17	Sphk1	chr11	protein_coding	sphingosine kinase 1
chr11	116422912	116424796	+	116422027	116424796	A5SS	0.16	50	50	ENSMUST00000106388.9	ENSMUSG00000061878.17	Sphk1	chr11	protein_coding	sphingosine kinase 1
chr11	116423403	116424796	+	116422027	116424796	A5SS	0.16	50	50	ENSMUST00000106388.9	ENSMUSG00000061878.17	Sphk1	chr11	protein_coding	sphingosine kinase 1
chr11	116423517	116424796	+	116422027	116424796	A5SS	0.16	50	50	ENSMUST00000106388.9	ENSMUSG00000061878.17	Sphk1	chr11	protein_coding	sphingosine kinase 1
chr11	116424194	116424796	+	116422027	116424796	A5SS	0.16	50	50	ENSMUST00000106388.9	ENSMUSG00000061878.17	Sphk1	chr11	protein_coding	sphingosine kinase 1
chr11	116424608	116424796	+	116422027	116424796	A5SS	0.16	50	50	ENSMUST00000106388.9	ENSMUSG00000061878.17	Sphk1	chr11	protein_coding	sphingosine kinase 1
chr11	116425144	116425675	+	116424999	116425675	A5SS	0.5	50	50	ENSMUST00000106388.9	ENSMUSG00000061878.17	Sphk1	chr11	protein_coding	sphingosine kinase 1
chr11	116426000	116426438	+	116426000	116426078	3pMXE	0.5	50	50	ENSMUST00000136526.2	ENSMUSG00000061878.17	Sphk1	chr11	protein_coding	sphingosine kinase 1
chr11	116423403	116424796	+	116422912	116424796	A5SS	0.16	50	50	ENSMUST00000106387.9	ENSMUSG00000061878.17	Sphk1	chr11	protein_coding	sphingosine kinase 1
chr11	116423517	116424796	+	116422912	116424796	A5SS	0.16	50	50	ENSMUST00000106387.9	ENSMUSG00000061878.17	Sphk1	chr11	protein_coding	sphingosine kinase 1
chr11	116424194	116424796	+	116422912	116424796	A5SS	0.16	50	50	ENSMUST00000106387.9	ENSMUSG00000061878.17	Sphk1	chr11	protein_coding	sphingosine kinase 1
chr11	116424608	116424796	+	116422912	116424796	A5SS	0.16	50	50	ENSMUST00000106387.9	ENSMUSG00000061878.17	Sphk1	chr11	protein_coding	sphingosine kinase 1
chr11	116423403	116424796	+	116423517	116424796	A5SS	0.16	50	50	ENSMUST00000106386.8	ENSMUSG00000061878.17	Sphk1	chr11	protein_coding	sphingosine kinase 1
chr11	116424194	116424796	+	116423517	116424796	A5SS	0.16	50	50	ENSMUST00000106386.8	ENSMUSG00000061878.17	Sphk1	chr11	protein_coding	sphingosine kinase 1
chr11	116424608	116424796	+	116423517	116424796	A5SS	0.16	50	50	ENSMUST00000106386.8	ENSMUSG00000061878.17	Sphk1	chr11	protein_coding	sphingosine kinase 1
chr11	116424194	116424796	+	116423403	116424796	A5SS	0.16	50	50	ENSMUST00000155102.8	ENSMUSG00000061878.17	Sphk1	chr11	protein_coding	sphingosine kinase 1
chr11	116424608	116424796	+	116423403	116424796	A5SS	0.16	50	50	ENSMUST00000155102.8	ENSMUSG00000061878.17	Sphk1	chr11	protein_coding	sphingosine kinase 1
chr11	116424608	116424796	+	116424194	116424796	A5SS	0.16	50	50	ENSMUST00000063446.13	ENSMUSG00000061878.17	Sphk1	chr11	protein_coding	sphingosine kinase 1
chr11	116434558	116434692	-	116434553	116434692	A3SS	0.5	50	50	ENSMUST00000134102.2	ENSMUSG00000020802.9	Ube2o	chr11	protein_coding	ubiquitin-conjugating enzyme E2O
chr11	116487106	116487377	+	116477659	116487377	A5SS	0.5	50	50	ENSMUST00000142978.2	ENSMUSG00000020804.13	Aanat	chr11	protein_coding	arylalkylamine N-acetyltransferase
chr11	116487106	116487615	+	116487478	116487615	A5SS&ES	0.5	50	50	ENSMUST00000142978.2	ENSMUSG00000020804.13	Aanat	chr11	protein_coding	arylalkylamine N-acetyltransferase
chr11	116487106	116487615	+	116487106;116487478	116487377;116487615	ES	0.5	50	50	ENSMUST00000021160.10	ENSMUSG00000020804.13	Aanat	chr11	protein_coding	arylalkylamine N-acetyltransferase
chr11	116486619	116486863	+	116486619	116486952	A3SS	0.5	50	50	ENSMUST00000021160.10	ENSMUSG00000020804.13	Aanat	chr11	protein_coding	arylalkylamine N-acetyltransferase
chr11	116501305	116517557	-	116501305	116515004	5pMXE	0.5	50	50	ENSMUST00000103029.10	ENSMUSG00000020806.16	Rhbdf2	chr11	protein_coding	rhomboid 5 homolog 2
chr11	116544803	116548364	+	116544803;116548133	116547948;116548364	ES	0.5	50	50	ENSMUST00000148484.9	ENSMUSG00000075410.14	Prcd	chr11	protein_coding	photoreceptor disc component
chr11	116544803	116548364	+	116548133	116548364	5pMXE	0.5	50	50	ENSMUST00000116318.3	ENSMUSG00000075410.14	Prcd	chr11	protein_coding	photoreceptor disc component
chr11	116565201	116575571	+	116565201	116566334	3pMXE	0.33	50	50	ENSMUST00000239363.2	ENSMUSG00000020812.19	Snhg16	chr11	lncRNA	small nucleolar RNA host gene 16
chr11	116565201	116566315	+	116565201	116566334	A3SS	0.33	50	50	ENSMUST00000239363.2	ENSMUSG00000020812.19	Snhg16	chr11	lncRNA	small nucleolar RNA host gene 16
chr11	116563770	116564764	+	116563564	116564764	A5SS	0.5	50	50	ENSMUST00000239363.2	ENSMUSG00000020812.19	Snhg16	chr11	lncRNA	small nucleolar RNA host gene 16
chr11	116562582	116563490	+	116562582;116563181	116562990;116563490	ES	0.5	50	50	ENSMUST00000139934.8	ENSMUSG00000020812.19	Snhg16	chr11	lncRNA	small nucleolar RNA host gene 16
chr11	116562582	116563490	+	116563181	116563490	A5SS	0.5	50	50	ENSMUST00000239226.2	ENSMUSG00000020812.19	Snhg16	chr11	lncRNA	small nucleolar RNA host gene 16
chr11	116562582	116563490	+	116562582	116562990	A3SS	0.5	50	50	ENSMUST00000153405.3	ENSMUSG00000020812.19	Snhg16	chr11	lncRNA	small nucleolar RNA host gene 16
chr11	116565201	116566315	+	116565201	116575571	A3SS	0.33	50	50	ENSMUST00000239190.2	ENSMUSG00000020812.19	Snhg16	chr11	lncRNA	small nucleolar RNA host gene 16
chr11	116645315;116646036	116645926;116646119	+	116645315	116646119	cassetteExon	0.5	100	100	ENSMUST00000156293.8	ENSMUSG00000056032.13	BC018473	chr11	lncRNA	cDNA sequence BC018473
chr11	116643412	116644300	+	116643412	116644396	A3SS	0.5	50	50	ENSMUST00000156293.8	ENSMUSG00000056032.13	BC018473	chr11	lncRNA	cDNA sequence BC018473
chr11	116701693	116702749	-	116695480	116702749	A3SS	0.5	50	50	ENSMUST00000021170.9	ENSMUSG00000020814.14	Mxra7	chr11	protein_coding	matrix-remodelling associated 7
chr11	116698794	116701606	-	116698794	116701614	A5SS	0.5	50	50	ENSMUST00000047715.12	ENSMUSG00000020814.14	Mxra7	chr11	protein_coding	matrix-remodelling associated 7
chr11	116729954	116731895	-	116729954;116731371	116730664;116731895	ES	0.5	50	50	ENSMUST00000141735.8	ENSMUSG00000056962.12	Jmjd6	chr11	protein_coding	jumonji domain containing 6
chr11	116729954	116731236	-	116729954	116730664	A5SS	0.33	50	50	ENSMUST00000141735.8	ENSMUSG00000056962.12	Jmjd6	chr11	protein_coding	jumonji domain containing 6
chr11	116729954	116731895	-	116729954;116731371	116731236;116731895	ES	0.5	50	50	ENSMUST00000047616.10	ENSMUSG00000056962.12	Jmjd6	chr11	protein_coding	jumonji domain containing 6
chr11	116729954;116730752	116730664;116731236	-	116729954	116731236	cassetteExon	0.5	100	100	ENSMUST00000047616.10	ENSMUSG00000056962.12	Jmjd6	chr11	protein_coding	jumonji domain containing 6
chr11	116729954;116730757	116730664;116731236	-	116729954	116731236	cassetteExon	0.5	100	100	ENSMUST00000047616.10	ENSMUSG00000056962.12	Jmjd6	chr11	protein_coding	jumonji domain containing 6
chr11	116729954	116730664	-	116729954	116731895	A5SS	0.33	50	50	ENSMUST00000142495.8	ENSMUSG00000056962.12	Jmjd6	chr11	protein_coding	jumonji domain containing 6
chr11	116730752	116731236	-	116730752	116731274	A5SS	0.5	50	50	ENSMUST00000124831.2	ENSMUSG00000056962.12	Jmjd6	chr11	protein_coding	jumonji domain containing 6
chr11	116730757	116731236	-	116730752	116731236	A3SS	0.33	50	50	ENSMUST00000140349.8	ENSMUSG00000056962.12	Jmjd6	chr11	protein_coding	jumonji domain containing 6
chr11	116734600;116736771	116736589;116739080	+	116734600	116739080	cassetteExon	0.5	100	100	ENSMUST00000106370.10	ENSMUSG00000090266.11	Mettl23	chr11	protein_coding	methyltransferase like 23
chr11	116734600;116736771	116736645;116739080	+	116734600	116739080	cassetteExon	0.5	100	100	ENSMUST00000106370.10	ENSMUSG00000090266.11	Mettl23	chr11	protein_coding	methyltransferase like 23
chr11	116734600	116739080	+	116734600	116736589	3pMXE	0.33	50	50	ENSMUST00000128784.2	ENSMUSG00000090266.11	Mettl23	chr11	protein_coding	methyltransferase like 23
chr11	116734600	116736645	+	116734600	116736589	A3SS	0.33	50	50	ENSMUST00000128784.2	ENSMUSG00000090266.11	Mettl23	chr11	protein_coding	methyltransferase like 23
chr11	116734600	116739080	+	116734600	116736645	3pMXE	0.33	50	50	ENSMUST00000176765.2	ENSMUSG00000090266.11	Mettl23	chr11	protein_coding	methyltransferase like 23
chr11	116739964	116740042	+	116739964	116744826	A3SS	0.5	50	50	ENSMUST00000143184.2	ENSMUSG00000090266.11	Mettl23	chr11	protein_coding	methyltransferase like 23
chr11	116743681	116744826	+	116739964	116744826	A5SS	0.25	50	50	ENSMUST00000143184.2	ENSMUSG00000090266.11	Mettl23	chr11	protein_coding	methyltransferase like 23
chr11	116744583	116744826	+	116739964	116744826	A5SS	0.25	50	50	ENSMUST00000143184.2	ENSMUSG00000090266.11	Mettl23	chr11	protein_coding	methyltransferase like 23
chr11	116744729	116744826	+	116739964	116744826	A5SS	0.25	50	50	ENSMUST00000143184.2	ENSMUSG00000090266.11	Mettl23	chr11	protein_coding	methyltransferase like 23
chr11	116741787;116742577	116742317;116742847	-	116741787	116742847	cassetteExon	0.5	100	100	ENSMUST00000092404.13	ENSMUSG00000034120.19	Srsf2	chr11	protein_coding	serine and arginine-rich splicing factor 2
chr11	116741787;116742577	116742474;116742847	-	116741787	116742847	cassetteExon	0.5	100	100	ENSMUST00000092404.13	ENSMUSG00000034120.19	Srsf2	chr11	protein_coding	serine and arginine-rich splicing factor 2
chr11	116741787	116742317	-	116741787	116742474	A5SS	0.33	50	50	ENSMUST00000136914.8	ENSMUSG00000034120.19	Srsf2	chr11	protein_coding	serine and arginine-rich splicing factor 2
chr11	116741787	116742847	-	116741787	116742317	5pMXE	0.33	50	50	ENSMUST00000177429.2	ENSMUSG00000034120.19	Srsf2	chr11	protein_coding	serine and arginine-rich splicing factor 2
chr11	116749407	116750125	+	116749407	116750150	A3SS	0.33	50	50	ENSMUST00000139954.9	ENSMUSG00000020818.17	Mfsd11	chr11	protein_coding	major facilitator superfamily domain containing 11
chr11	116749407	116750175	+	116749407	116750150	A3SS	0.33	50	50	ENSMUST00000139954.9	ENSMUSG00000020818.17	Mfsd11	chr11	protein_coding	major facilitator superfamily domain containing 11
chr11	116744583	116744826	+	116743681	116744826	A5SS	0.25	50	50	ENSMUST00000139954.9	ENSMUSG00000020818.17	Mfsd11	chr11	protein_coding	major facilitator superfamily domain containing 11
chr11	116744729	116744826	+	116743681	116744826	A5SS	0.25	50	50	ENSMUST00000139954.9	ENSMUSG00000020818.17	Mfsd11	chr11	protein_coding	major facilitator superfamily domain containing 11
chr11	116752521	116754732	+	116752493	116754732	A5SS	0.5	50	50	ENSMUST00000139954.9	ENSMUSG00000020818.17	Mfsd11	chr11	protein_coding	major facilitator superfamily domain containing 11
chr11	116759267	116759360	+	116756782	116759360	A5SS	0.5	50	50	ENSMUST00000139954.9	ENSMUSG00000020818.17	Mfsd11	chr11	protein_coding	major facilitator superfamily domain containing 11
chr11	116744729	116744826	+	116744583	116744826	A5SS	0.25	50	50	ENSMUST00000135135.2	ENSMUSG00000020818.17	Mfsd11	chr11	protein_coding	major facilitator superfamily domain containing 11
chr11	116749407	116750175	+	116749407	116750125	A3SS	0.33	50	50	ENSMUST00000021173.14	ENSMUSG00000020818.17	Mfsd11	chr11	protein_coding	major facilitator superfamily domain containing 11
chr11	116750204	116750323	+	116750204	116752349	A3SS	0.5	50	50	ENSMUST00000153084.3	ENSMUSG00000020818.17	Mfsd11	chr11	protein_coding	major facilitator superfamily domain containing 11
chr11	116751943	116752349	+	116750204	116752349	A5SS	0.5	50	50	ENSMUST00000153084.3	ENSMUSG00000020818.17	Mfsd11	chr11	protein_coding	major facilitator superfamily domain containing 11
chr11	116864257	116868507	+	116864257;116865023	116865018;116868507	ES	0.5	50	50	ENSMUST00000103027.10	ENSMUSG00000043857.17	Mgat5b	chr11	protein_coding	mannoside acetylglucosaminyltransferase 5, isoenzyme B
chr11	116864242	116865018	+	116864257	116865018	A5SS	0.5	50	50	ENSMUST00000103027.10	ENSMUSG00000043857.17	Mgat5b	chr11	protein_coding	mannoside acetylglucosaminyltransferase 5, isoenzyme B
chr11	116930136	116930425	-	116927603	116930425	A3SS	0.5	50	50	ENSMUST00000150628.8	ENSMUSG00000086902.8	Gm11728	chr11	lncRNA	predicted gene 11728
chr11	116968028;116969165	116968669;116969602	+	116968028	116969602	cassetteExon	0.5	100	100	ENSMUST00000232695.2	ENSMUSG00000086859.5	Snhg20	chr11	lncRNA	small nucleolar RNA host gene 20
chr11	116967403	116967934	+	116967194	116967934	A5SS	0.25	50	50	ENSMUST00000232695.2	ENSMUSG00000086859.5	Snhg20	chr11	lncRNA	small nucleolar RNA host gene 20
chr11	116967587	116967934	+	116967194	116967934	A5SS	0.25	50	50	ENSMUST00000232695.2	ENSMUSG00000086859.5	Snhg20	chr11	lncRNA	small nucleolar RNA host gene 20
chr11	116967724	116967934	+	116967194	116967934	A5SS	0.25	50	50	ENSMUST00000232695.2	ENSMUSG00000086859.5	Snhg20	chr11	lncRNA	small nucleolar RNA host gene 20
chr11	116967587	116967934	+	116967403	116967934	A5SS	0.25	50	50	ENSMUST00000233685.2	ENSMUSG00000086859.5	Snhg20	chr11	lncRNA	small nucleolar RNA host gene 20
chr11	116967724	116967934	+	116967403	116967934	A5SS	0.25	50	50	ENSMUST00000233685.2	ENSMUSG00000086859.5	Snhg20	chr11	lncRNA	small nucleolar RNA host gene 20
chr11	116967724	116967934	+	116967587	116967934	A5SS	0.25	50	50	ENSMUST00000232907.2	ENSMUSG00000086859.5	Snhg20	chr11	lncRNA	small nucleolar RNA host gene 20
chr11	117008078	117018736	+	117008078	117032244	A3SS	0.5	50	50	ENSMUST00000127090.8	ENSMUSG00000020823.17	Sec14l1	chr11	protein_coding	SEC14-like lipid binding 1
chr11	117047728	117048085	+	117047728	117049580	A3SS	0.5	50	50	ENSMUST00000021177.15	ENSMUSG00000020823.17	Sec14l1	chr11	protein_coding	SEC14-like lipid binding 1
chr11	117123545	117181224	+	117109757	117181224	A5SS	0.33	50	50	ENSMUST00000093907.11	ENSMUSG00000059248.14	Septin9	chr11	protein_coding	septin 9
chr11	117157421	117181224	+	117109757	117181224	A5SS	0.33	50	50	ENSMUST00000093907.11	ENSMUSG00000059248.14	Septin9	chr11	protein_coding	septin 9
chr11	117199097	117242255	+	117181862	117242255	A5SS	0.2	50	50	ENSMUST00000093907.11	ENSMUSG00000059248.14	Septin9	chr11	protein_coding	septin 9
chr11	117217335	117242255	+	117181862	117242255	A5SS	0.2	50	50	ENSMUST00000093907.11	ENSMUSG00000059248.14	Septin9	chr11	protein_coding	septin 9
chr11	117222679	117242255	+	117181862	117242255	A5SS	0.2	50	50	ENSMUST00000093907.11	ENSMUSG00000059248.14	Septin9	chr11	protein_coding	septin 9
chr11	117223296	117242255	+	117181862	117242255	A5SS	0.2	50	50	ENSMUST00000093907.11	ENSMUSG00000059248.14	Septin9	chr11	protein_coding	septin 9
chr11	117157421	117181224	+	117123545	117181224	A5SS	0.33	50	50	ENSMUST00000106354.9	ENSMUSG00000059248.14	Septin9	chr11	protein_coding	septin 9
chr11	117217335	117242255	+	117199097	117242255	A5SS	0.2	50	50	ENSMUST00000153668.8	ENSMUSG00000059248.14	Septin9	chr11	protein_coding	septin 9
chr11	117222679	117242255	+	117199097	117242255	A5SS	0.2	50	50	ENSMUST00000153668.8	ENSMUSG00000059248.14	Septin9	chr11	protein_coding	septin 9
chr11	117223296	117242255	+	117199097	117242255	A5SS	0.2	50	50	ENSMUST00000153668.8	ENSMUSG00000059248.14	Septin9	chr11	protein_coding	septin 9
chr11	117222679	117242255	+	117217335	117242255	A5SS	0.2	50	50	ENSMUST00000127383.8	ENSMUSG00000059248.14	Septin9	chr11	protein_coding	septin 9
chr11	117223296	117242255	+	117217335	117242255	A5SS	0.2	50	50	ENSMUST00000127383.8	ENSMUSG00000059248.14	Septin9	chr11	protein_coding	septin 9
chr11	117223296	117242255	+	117222679	117242255	A5SS	0.2	50	50	ENSMUST00000100193.8	ENSMUSG00000059248.14	Septin9	chr11	protein_coding	septin 9
chr11	117630835	117632495	+	117630835	117632471	A3SS	0.5	50	50	ENSMUST00000026658.13	ENSMUSG00000025571.14	Tnrc6c	chr11	protein_coding	trinucleotide repeat containing 6C
chr11	117546157	117591551	+	117545512	117591551	A5SS	0.5	50	50	ENSMUST00000026658.13	ENSMUSG00000025571.14	Tnrc6c	chr11	protein_coding	trinucleotide repeat containing 6C
chr11	117657159	117658392	-	117657159;117657741	117657597;117658392	ES	0.5	50	50	ENSMUST00000131606.8	ENSMUSG00000025572.19	Tmc6	chr11	protein_coding	transmembrane channel-like gene family 6
chr11	117670117	117671362	-	117670117	117670370	5pMXE	0.2	50	50	ENSMUST00000131606.8	ENSMUSG00000025572.19	Tmc6	chr11	protein_coding	transmembrane channel-like gene family 6
chr11	117670117	117671736	-	117670117	117670370	5pMXE	0.2	50	50	ENSMUST00000131606.8	ENSMUSG00000025572.19	Tmc6	chr11	protein_coding	transmembrane channel-like gene family 6
chr11	117670117	117672276	-	117670117	117670370	5pMXE	0.2	50	50	ENSMUST00000131606.8	ENSMUSG00000025572.19	Tmc6	chr11	protein_coding	transmembrane channel-like gene family 6
chr11	117666672;117666976	117666880;117667064	-	117666672	117667064	cassetteExon	0.5	100	100	ENSMUST00000131606.8	ENSMUSG00000025572.19	Tmc6	chr11	protein_coding	transmembrane channel-like gene family 6
chr11	117669626;117669874	117669759;117669989	-	117669626	117669989	cassetteExon	0.5	100	100	ENSMUST00000131606.8	ENSMUSG00000025572.19	Tmc6	chr11	protein_coding	transmembrane channel-like gene family 6
chr11	117661628	117663499	-	117661612	117663499	A3SS	0.5	50	50	ENSMUST00000131606.8	ENSMUSG00000025572.19	Tmc6	chr11	protein_coding	transmembrane channel-like gene family 6
chr11	117670117	117670252	-	117670117	117670370	A5SS	0.2	50	50	ENSMUST00000131606.8	ENSMUSG00000025572.19	Tmc6	chr11	protein_coding	transmembrane channel-like gene family 6
chr11	117670117	117671736	-	117670117	117671362	5pMXE	0.2	50	50	ENSMUST00000026659.10	ENSMUSG00000025572.19	Tmc6	chr11	protein_coding	transmembrane channel-like gene family 6
chr11	117670117	117672276	-	117670117	117671362	5pMXE	0.2	50	50	ENSMUST00000026659.10	ENSMUSG00000025572.19	Tmc6	chr11	protein_coding	transmembrane channel-like gene family 6
chr11	117670117;117670336	117670252;117671362	-	117670117	117671362	cassetteExon	0.5	100	100	ENSMUST00000026659.10	ENSMUSG00000025572.19	Tmc6	chr11	protein_coding	transmembrane channel-like gene family 6
chr11	117670117	117672276	-	117670117	117671736	5pMXE	0.2	50	50	ENSMUST00000136729.8	ENSMUSG00000025572.19	Tmc6	chr11	protein_coding	transmembrane channel-like gene family 6
chr11	117670117	117670252	-	117670117	117671736	A5SS	0.2	50	50	ENSMUST00000136729.8	ENSMUSG00000025572.19	Tmc6	chr11	protein_coding	transmembrane channel-like gene family 6
chr11	117669626	117669989	-	117669874	117669989	3pMXE	0.5	50	50	ENSMUST00000152304.3	ENSMUSG00000025572.19	Tmc6	chr11	protein_coding	transmembrane channel-like gene family 6
chr11	117670117	117670252	-	117670117	117672276	A5SS	0.2	50	50	ENSMUST00000152304.3	ENSMUSG00000025572.19	Tmc6	chr11	protein_coding	transmembrane channel-like gene family 6
chr11	117674746	117674936	+	117674746	117674939	A3SS	0.5	50	50	ENSMUST00000127080.9	ENSMUSG00000050106.19	Tmc8	chr11	protein_coding	transmembrane channel-like gene family 8
chr11	117673234	117673876	+	117673036	117673876	A5SS	0.33	50	50	ENSMUST00000127080.9	ENSMUSG00000050106.19	Tmc8	chr11	protein_coding	transmembrane channel-like gene family 8
chr11	117673696	117673876	+	117673036	117673876	A5SS	0.33	50	50	ENSMUST00000127080.9	ENSMUSG00000050106.19	Tmc8	chr11	protein_coding	transmembrane channel-like gene family 8
chr11	117673696	117673876	+	117673234	117673876	A5SS	0.33	50	50	ENSMUST00000050874.14	ENSMUSG00000050106.19	Tmc8	chr11	protein_coding	transmembrane channel-like gene family 8
chr11	117700629	117703872	+	117700629;117703522	117703285;117703872	ES	0.5	50	50	ENSMUST00000026649.14	ENSMUSG00000048277.16	Syngr2	chr11	protein_coding	synaptogyrin 2
chr11	117703522	117704104	+	117703522;117704011	117703872;117704104	ES	0.5	50	50	ENSMUST00000026649.14	ENSMUSG00000048277.16	Syngr2	chr11	protein_coding	synaptogyrin 2
chr11	117700629	117703375	+	117700629	117703285	A3SS	0.33	50	50	ENSMUST00000026649.14	ENSMUSG00000048277.16	Syngr2	chr11	protein_coding	synaptogyrin 2
chr11	117704011	117704217	+	117704011	117704104	A3SS	0.5	50	50	ENSMUST00000026649.14	ENSMUSG00000048277.16	Syngr2	chr11	protein_coding	synaptogyrin 2
chr11	117703522	117704104	+	117703522	117703872	A3SS&ES	0.5	50	50	ENSMUST00000177131.8	ENSMUSG00000048277.16	Syngr2	chr11	protein_coding	synaptogyrin 2
chr11	117700629;117703522	117703285;117704104	+	117700629;117704011	117703872;117704104	MXE	0.5	100	100	ENSMUST00000177241.2	ENSMUSG00000048277.16	Syngr2	chr11	protein_coding	synaptogyrin 2
chr11	117700629;117703522	117703375;117703872	+	117700629	117703872	cassetteExon	0.5	100	100	ENSMUST00000177241.2	ENSMUSG00000048277.16	Syngr2	chr11	protein_coding	synaptogyrin 2
chr11	117700629;117703522	117703375;117704104	+	117700629;117704011	117703872;117704104	MXE	0.5	100	100	ENSMUST00000177241.2	ENSMUSG00000048277.16	Syngr2	chr11	protein_coding	synaptogyrin 2
chr11	117700629	117703872	+	117703522	117703872	5pMXE	0.5	50	50	ENSMUST00000143852.2	ENSMUSG00000048277.16	Syngr2	chr11	protein_coding	synaptogyrin 2
chr11	117703522	117704104	+	117704011	117704104	5pMXE	0.5	50	50	ENSMUST00000176936.2	ENSMUSG00000048277.16	Syngr2	chr11	protein_coding	synaptogyrin 2
chr11	117700629	117703285	+	117700629	117723171	A3SS	0.25	50	50	ENSMUST00000132298.2	ENSMUSG00000093485.2	Gm20708	chr11	protein_coding	predicted gene 20708
chr11	117700629	117703375	+	117700629	117723171	A3SS	0.25	50	50	ENSMUST00000132298.2	ENSMUSG00000093485.2	Gm20708	chr11	protein_coding	predicted gene 20708
chr11	117700629	117703872	+	117700629	117723171	A3SS	0.25	50	50	ENSMUST00000132298.2	ENSMUSG00000093485.2	Gm20708	chr11	protein_coding	predicted gene 20708
chr11	117723402	117725593	+	117723402	117729319	A3SS	0.33	50	50	ENSMUST00000132298.2	ENSMUSG00000093485.2	Gm20708	chr11	protein_coding	predicted gene 20708
chr11	117723402	117725772	+	117723402	117729319	A3SS	0.33	50	50	ENSMUST00000132298.2	ENSMUSG00000093485.2	Gm20708	chr11	protein_coding	predicted gene 20708
chr11	117718995	117723171	+	117700629	117723171	A5SS	0.5	50	50	ENSMUST00000132298.2	ENSMUSG00000093485.2	Gm20708	chr11	protein_coding	predicted gene 20708
chr11	117727338	117729319	+	117723402	117729319	A5SS	0.5	50	50	ENSMUST00000132298.2	ENSMUSG00000093485.2	Gm20708	chr11	protein_coding	predicted gene 20708
chr11	117713016	117716427	-	117713016;117715607	117715497;117716427	ES	0.5	50	50	ENSMUST00000026661.4	ENSMUSG00000025574.14	Tk1	chr11	protein_coding	thymidine kinase 1
chr11	117715607	117716540	-	117715607;117716458	117716427;117716540	ES	0.5	50	50	ENSMUST00000026661.4	ENSMUSG00000025574.14	Tk1	chr11	protein_coding	thymidine kinase 1
chr11	117713016;117716458	117716427;117716540	-	117713016;117715607	117715497;117716540	MXE	0.5	100	100	ENSMUST00000154790.2	ENSMUSG00000025574.14	Tk1	chr11	protein_coding	thymidine kinase 1
chr11	117713016	117716427	-	117715607	117716427	3pMXE	0.5	50	50	ENSMUST00000129852.2	ENSMUSG00000025574.14	Tk1	chr11	protein_coding	thymidine kinase 1
chr11	117715607	117716540	-	117716458	117716540	3pMXE	0.5	50	50	ENSMUST00000150027.2	ENSMUSG00000025574.14	Tk1	chr11	protein_coding	thymidine kinase 1
chr11	117723402	117725772	+	117723402;117725678	117725593;117725772	ES	0.5	50	50	ENSMUST00000073388.13	ENSMUSG00000017718.16	Afmid	chr11	protein_coding	arylformamidase
chr11	117761446	117762430	-	117761446;117761926	117761838;117762430	ES	0.5	50	50	ENSMUST00000033230.8	ENSMUSG00000017713.10	Tha1	chr11	protein_coding	threonine aldolase 1
chr11	117859928	117860201	-	117859928	117860612	A5SS	0.5	50	50	ENSMUST00000123255.2	ENSMUSG00000053113.4	Socs3	chr11	protein_coding	suppressor of cytokine signaling 3
chr11	117896717	117905473	+	117896717	117905400	A3SS	0.5	50	50	ENSMUST00000132676.8	ENSMUSG00000017715.12	Pgs1	chr11	protein_coding	phosphatidylglycerophosphate synthase 1
chr11	117891859	117892442	+	117891102	117892442	A5SS	0.5	50	50	ENSMUST00000132676.8	ENSMUSG00000017715.12	Pgs1	chr11	protein_coding	phosphatidylglycerophosphate synthase 1
chr11	117974649	117976894	-	117973808	117976894	A3SS	0.5	50	50	ENSMUST00000084803.12	ENSMUSG00000033987.17	Dnah17	chr11	protein_coding	dynein, axonemal, heavy chain 17
chr11	117981649	117982220	-	117981628	117982220	A3SS	0.5	50	50	ENSMUST00000084803.12	ENSMUSG00000033987.17	Dnah17	chr11	protein_coding	dynein, axonemal, heavy chain 17
chr11	117989504	117991865	-	117991018	117991865	A3SS&ES	0.33	50	50	ENSMUST00000084803.12	ENSMUSG00000033987.17	Dnah17	chr11	protein_coding	dynein, axonemal, heavy chain 17
chr11	117989516	117991865	-	117991018	117991865	A3SS&ES	0.33	50	50	ENSMUST00000084803.12	ENSMUSG00000033987.17	Dnah17	chr11	protein_coding	dynein, axonemal, heavy chain 17
chr11	117979116	117979776	-	117979116	117979782	A5SS	0.5	50	50	ENSMUST00000084803.12	ENSMUSG00000033987.17	Dnah17	chr11	protein_coding	dynein, axonemal, heavy chain 17
chr11	117989516	117991865	-	117989504	117991865	A3SS	0.33	50	50	ENSMUST00000106308.10	ENSMUSG00000033987.17	Dnah17	chr11	protein_coding	dynein, axonemal, heavy chain 17
chr11	117982345	117984345	-	117982345	117984498	A5SS	0.5	50	50	ENSMUST00000018719.4	ENSMUSG00000033987.17	Dnah17	chr11	protein_coding	dynein, axonemal, heavy chain 17
chr11	118056920	118059842	-	118024200	118059842	A3SS	0.5	50	50	ENSMUST00000100181.11	ENSMUSG00000017132.18	Cyth1	chr11	protein_coding	cytohesin 1
chr11	118084523	118103475	-	118084523	118139265	A5SS	0.25	50	50	ENSMUST00000100181.11	ENSMUSG00000017132.18	Cyth1	chr11	protein_coding	cytohesin 1
chr11	118084523	118109785	-	118084523	118139265	A5SS	0.25	50	50	ENSMUST00000100181.11	ENSMUSG00000017132.18	Cyth1	chr11	protein_coding	cytohesin 1
chr11	118084523	118117676	-	118084523	118139265	A5SS	0.25	50	50	ENSMUST00000100181.11	ENSMUSG00000017132.18	Cyth1	chr11	protein_coding	cytohesin 1
chr11	118084523	118109785	-	118084523	118103475	5pMXE	0.25	50	50	ENSMUST00000106302.9	ENSMUSG00000017132.18	Cyth1	chr11	protein_coding	cytohesin 1
chr11	118084523	118117676	-	118084523	118103475	5pMXE	0.25	50	50	ENSMUST00000106302.9	ENSMUSG00000017132.18	Cyth1	chr11	protein_coding	cytohesin 1
chr11	118084523	118109785	-	118084523	118117676	A5SS	0.25	50	50	ENSMUST00000141243.8	ENSMUSG00000017132.18	Cyth1	chr11	protein_coding	cytohesin 1
chr11	118176660	118178493	-	118176825	118178493	A3SS	0.5	50	50	ENSMUST00000106296.9	ENSMUSG00000033909.18	Usp36	chr11	protein_coding	ubiquitin specific peptidase 36
chr11	118178592	118180783	-	118178649	118180783	A3SS	0.5	50	50	ENSMUST00000106296.9	ENSMUSG00000033909.18	Usp36	chr11	protein_coding	ubiquitin specific peptidase 36
chr11	118211035	118246380	-	118211035	118245787	5pMXE	0.5	50	50	ENSMUST00000017610.10	ENSMUSG00000017466.10	Timp2	chr11	protein_coding	tissue inhibitor of metalloproteinase 2
chr11	118287669	118288947	-	118284231	118288947	A3SS	0.5	50	50	ENSMUST00000144529.2	ENSMUSG00000033880.12	Lgals3bp	chr11	protein_coding	lectin, galactoside-binding, soluble, 3 binding protein
chr11	118290627	118291571	-	118290627	118292612	A5SS	0.33	50	50	ENSMUST00000043722.10	ENSMUSG00000033880.12	Lgals3bp	chr11	protein_coding	lectin, galactoside-binding, soluble, 3 binding protein
chr11	118290627	118292516	-	118290627	118292612	A5SS	0.33	50	50	ENSMUST00000043722.10	ENSMUSG00000033880.12	Lgals3bp	chr11	protein_coding	lectin, galactoside-binding, soluble, 3 binding protein
chr11	118290627	118291571	-	118290627	118292516	A5SS	0.33	50	50	ENSMUST00000106290.4	ENSMUSG00000033880.12	Lgals3bp	chr11	protein_coding	lectin, galactoside-binding, soluble, 3 binding protein
chr11	118299710;118301016	118300906;118301679	-	118299710	118301679	cassetteExon	0.5	100	100	ENSMUST00000106288.8	ENSMUSG00000025575.15	Cant1	chr11	protein_coding	calcium activated nucleotidase 1
chr11	118308632	118309756	-	118308480	118309756	A3SS	0.5	50	50	ENSMUST00000106288.8	ENSMUSG00000025575.15	Cant1	chr11	protein_coding	calcium activated nucleotidase 1
chr11	118302337	118306556	-	118302337	118308400	A5SS	0.5	50	50	ENSMUST00000106288.8	ENSMUSG00000025575.15	Cant1	chr11	protein_coding	calcium activated nucleotidase 1
chr11	118308480	118309798	-	118308480	118309756	A5SS	0.5	50	50	ENSMUST00000106288.8	ENSMUSG00000025575.15	Cant1	chr11	protein_coding	calcium activated nucleotidase 1
chr11	118319394	118334518	+	118319394;118324236	118324071;118334518	ES	0.25	50	50	ENSMUST00000124861.2	ENSMUSG00000017446.15	C1qtnf1	chr11	protein_coding	C1q and tumor necrosis factor related protein 1
chr11	118324728	118334518	+	118324236	118334518	A5SS	0.25	50	50	ENSMUST00000124861.2	ENSMUSG00000017446.15	C1qtnf1	chr11	protein_coding	C1q and tumor necrosis factor related protein 1
chr11	118334383	118334518	+	118324236	118334518	A5SS	0.25	50	50	ENSMUST00000124861.2	ENSMUSG00000017446.15	C1qtnf1	chr11	protein_coding	C1q and tumor necrosis factor related protein 1
chr11	118324728	118334518	+	118319394	118334518	A5SS	0.25	50	50	ENSMUST00000017590.9	ENSMUSG00000017446.15	C1qtnf1	chr11	protein_coding	C1q and tumor necrosis factor related protein 1
chr11	118334383	118334518	+	118319394	118334518	A5SS	0.25	50	50	ENSMUST00000017590.9	ENSMUSG00000017446.15	C1qtnf1	chr11	protein_coding	C1q and tumor necrosis factor related protein 1
chr11	118334383	118334518	+	118324728	118334518	A5SS	0.25	50	50	ENSMUST00000106286.3	ENSMUSG00000017446.15	C1qtnf1	chr11	protein_coding	C1q and tumor necrosis factor related protein 1
chr11	118370113	118372700	+	118370113;118372250	118372102;118372700	ES	0.5	50	50	ENSMUST00000135383.9	ENSMUSG00000033857.13	Engase	chr11	protein_coding	endo-beta-N-acetylglucosaminidase
chr11	118369779	118369916	+	118369779	118369912	A3SS	0.5	50	50	ENSMUST00000135383.9	ENSMUSG00000033857.13	Engase	chr11	protein_coding	endo-beta-N-acetylglucosaminidase
chr11	118376731	118377271	+	118376731	118377274	A3SS	0.5	50	50	ENSMUST00000135383.9	ENSMUSG00000033857.13	Engase	chr11	protein_coding	endo-beta-N-acetylglucosaminidase
chr11	118377379	118377532	+	118377379	118377648	A3SS	0.5	50	50	ENSMUST00000135383.9	ENSMUSG00000033857.13	Engase	chr11	protein_coding	endo-beta-N-acetylglucosaminidase
chr11	118367956	118369709	+	118367930	118369709	A5SS	0.33	50	50	ENSMUST00000135383.9	ENSMUSG00000033857.13	Engase	chr11	protein_coding	endo-beta-N-acetylglucosaminidase
chr11	118368074	118369709	+	118367930	118369709	A5SS	0.33	50	50	ENSMUST00000135383.9	ENSMUSG00000033857.13	Engase	chr11	protein_coding	endo-beta-N-acetylglucosaminidase
chr11	118376144	118376583	+	118376140	118376583	A5SS	0.5	50	50	ENSMUST00000135383.9	ENSMUSG00000033857.13	Engase	chr11	protein_coding	endo-beta-N-acetylglucosaminidase
chr11	118368074	118369709	+	118367956	118369709	A5SS	0.33	50	50	ENSMUST00000172279.8	ENSMUSG00000033857.13	Engase	chr11	protein_coding	endo-beta-N-acetylglucosaminidase
chr11	118370113	118372700	+	118372250	118372700	5pMXE	0.5	50	50	ENSMUST00000139813.3	ENSMUSG00000033857.13	Engase	chr11	protein_coding	endo-beta-N-acetylglucosaminidase
chr11	118392455	118394546	-	118392455;118393760	118393668;118394546	ES	0.5	50	50	ENSMUST00000117731.8	ENSMUSG00000025576.18	Rbfox3	chr11	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 3
chr11	118702242	118802262	-	118702242	118800130	5pMXE	0.25	50	50	ENSMUST00000117731.8	ENSMUSG00000025576.18	Rbfox3	chr11	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 3
chr11	118404230;118501024	118500985;118561475	-	118404230	118561475	cassetteExon	0.5	100	100	ENSMUST00000117731.8	ENSMUSG00000025576.18	Rbfox3	chr11	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 3
chr11	118383464	118384976	-	118382067	118384976	A3SS	0.5	50	50	ENSMUST00000117731.8	ENSMUSG00000025576.18	Rbfox3	chr11	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 3
chr11	118387216	118387764	-	118387357	118387764	A3SS	0.5	50	50	ENSMUST00000117731.8	ENSMUSG00000025576.18	Rbfox3	chr11	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 3
chr11	118396586	118398035	-	118396586	118403976	A5SS	0.5	50	50	ENSMUST00000117731.8	ENSMUSG00000025576.18	Rbfox3	chr11	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 3
chr11	118404230	118460377	-	118404230	118561475	A5SS	0.33	50	50	ENSMUST00000117731.8	ENSMUSG00000025576.18	Rbfox3	chr11	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 3
chr11	118561579	118651654	-	118561579	118702104	A5SS	0.5	50	50	ENSMUST00000117731.8	ENSMUSG00000025576.18	Rbfox3	chr11	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 3
chr11	118702242	118779354	-	118702242	118800130	A5SS	0.25	50	50	ENSMUST00000117731.8	ENSMUSG00000025576.18	Rbfox3	chr11	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 3
chr11	118702242	118798600	-	118702242	118800130	A5SS	0.25	50	50	ENSMUST00000117731.8	ENSMUSG00000025576.18	Rbfox3	chr11	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 3
chr11	118404230	118460377	-	118404230	118500985	A5SS	0.33	50	50	ENSMUST00000103023.8	ENSMUSG00000025576.18	Rbfox3	chr11	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 3
chr11	118702242	118779354	-	118702242	118802262	A5SS	0.25	50	50	ENSMUST00000069343.12	ENSMUSG00000025576.18	Rbfox3	chr11	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 3
chr11	118702242	118798600	-	118702242	118802262	A5SS	0.25	50	50	ENSMUST00000069343.12	ENSMUSG00000025576.18	Rbfox3	chr11	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 3
chr11	118392455	118394546	-	118393760	118394546	3pMXE	0.5	50	50	ENSMUST00000136551.3	ENSMUSG00000025576.18	Rbfox3	chr11	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 3
chr11	118702242	118798600	-	118702242	118779354	5pMXE	0.25	50	50	ENSMUST00000128863.2	ENSMUSG00000025576.18	Rbfox3	chr11	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 3
chr11	118930824	118931608	-	118931217	118931608	A3SS&ES	0.5	50	50	ENSMUST00000128019.2	ENSMUSG00000025578.10	Cbx8	chr11	protein_coding	chromobox 8
chr11	118930824;118931217	118930920;118931608	-	118930824	118931608	cassetteExon	0.5	100	100	ENSMUST00000143831.2	ENSMUSG00000025578.10	Cbx8	chr11	protein_coding	chromobox 8
chr11	118973409	118975358	-	118973409	118975389	A5SS	0.5	50	50	ENSMUST00000026665.8	ENSMUSG00000039989.8	Cbx4	chr11	protein_coding	chromobox 4
chr11	119047633	119048566	-	119047636	119048566	A3SS	0.5	50	50	ENSMUST00000036113.4	ENSMUSG00000039976.5	Tbc1d16	chr11	protein_coding	TBC1 domain family, member 16
chr11	119101566	119112670	-	119101566	119119222	A5SS	0.5	50	50	ENSMUST00000036113.4	ENSMUSG00000039976.5	Tbc1d16	chr11	protein_coding	TBC1 domain family, member 16
chr11	119119988;119121520	119121451;119122299	+	119119988	119122299	cassetteExon	0.5	100	100	ENSMUST00000235971.2	ENSMUSG00000039963.21	Ccdc40	chr11	protein_coding	coiled-coil domain containing 40
chr11	119150869	119153589	+	119150869	119153901	A3SS	0.5	50	50	ENSMUST00000235971.2	ENSMUSG00000039963.21	Ccdc40	chr11	protein_coding	coiled-coil domain containing 40
chr11	119129598	119136661	+	119133944	119136661	A5SS&ES	0.5	50	50	ENSMUST00000235971.2	ENSMUSG00000039963.21	Ccdc40	chr11	protein_coding	coiled-coil domain containing 40
chr11	119150095	119150681	+	119145288	119150681	A5SS	0.5	50	50	ENSMUST00000235971.2	ENSMUSG00000039963.21	Ccdc40	chr11	protein_coding	coiled-coil domain containing 40
chr11	119166017	119166162	+	119166017	119167668	A3SS	0.5	50	50	ENSMUST00000106259.9	ENSMUSG00000025579.15	Gaa	chr11	protein_coding	glucosidase, alpha, acid
chr11	119169835	119170208	+	119169835	119171238	A3SS	0.5	50	50	ENSMUST00000106259.9	ENSMUSG00000025579.15	Gaa	chr11	protein_coding	glucosidase, alpha, acid
chr11	119158917	119160914	+	119159048	119160914	A5SS	0.5	50	50	ENSMUST00000106259.9	ENSMUSG00000025579.15	Gaa	chr11	protein_coding	glucosidase, alpha, acid
chr11	119185529	119186893	-	119185529;119186361	119186299;119186893	ES	0.5	50	50	ENSMUST00000026667.15	ENSMUSG00000025580.16	Eif4a3	chr11	protein_coding	eukaryotic translation initiation factor 4A3
chr11	119229298	119230401	+	119229298;119229761	119229698;119230401	ES	0.5	50	50	ENSMUST00000106250.8	ENSMUSG00000013483.15	Card14	chr11	protein_coding	caspase recruitment domain family, member 14
chr11	119229298	119230401	+	119229761	119230401	A5SS	0.5	50	50	ENSMUST00000151052.2	ENSMUSG00000013483.15	Card14	chr11	protein_coding	caspase recruitment domain family, member 14
chr11	119241378	119243472	-	119241378;119241855	119241750;119243472	ES	0.5	50	50	ENSMUST00000136523.8	ENSMUSG00000005043.14	Sgsh	chr11	protein_coding	N-sulfoglucosamine sulfohydrolase (sulfamidase)
chr11	119237617	119238514	-	119237663	119238514	A3SS	0.5	50	50	ENSMUST00000136523.8	ENSMUSG00000005043.14	Sgsh	chr11	protein_coding	N-sulfoglucosamine sulfohydrolase (sulfamidase)
chr11	119238625	119240366	-	119238610	119240366	A3SS	0.33	50	50	ENSMUST00000136523.8	ENSMUSG00000005043.14	Sgsh	chr11	protein_coding	N-sulfoglucosamine sulfohydrolase (sulfamidase)
chr11	119238717	119240366	-	119238610	119240366	A3SS	0.33	50	50	ENSMUST00000136523.8	ENSMUSG00000005043.14	Sgsh	chr11	protein_coding	N-sulfoglucosamine sulfohydrolase (sulfamidase)
chr11	119238717	119241750	-	119241378	119241750	A3SS&ES	0.5	50	50	ENSMUST00000136523.8	ENSMUSG00000005043.14	Sgsh	chr11	protein_coding	N-sulfoglucosamine sulfohydrolase (sulfamidase)
chr11	119243632	119246223	-	119243550	119246223	A3SS	0.5	50	50	ENSMUST00000136523.8	ENSMUSG00000005043.14	Sgsh	chr11	protein_coding	N-sulfoglucosamine sulfohydrolase (sulfamidase)
chr11	119238625	119240366	-	119238717	119240366	A3SS	0.33	50	50	ENSMUST00000005173.11	ENSMUSG00000005043.14	Sgsh	chr11	protein_coding	N-sulfoglucosamine sulfohydrolase (sulfamidase)
chr11	119238717;119241855	119241750;119243472	-	119238717;119241378	119240366;119243472	MXE	0.5	100	100	ENSMUST00000133507.8	ENSMUSG00000005043.14	Sgsh	chr11	protein_coding	N-sulfoglucosamine sulfohydrolase (sulfamidase)
chr11	119241378	119243472	-	119241855	119243472	A3SS&ES	0.5	50	50	ENSMUST00000141540.2	ENSMUSG00000005043.14	Sgsh	chr11	protein_coding	N-sulfoglucosamine sulfohydrolase (sulfamidase)
chr11	119238717	119240366	-	119238717	119241750	A5SS	0.5	50	50	ENSMUST00000141540.2	ENSMUSG00000005043.14	Sgsh	chr11	protein_coding	N-sulfoglucosamine sulfohydrolase (sulfamidase)
chr11	119247859	119250123	+	119247859;119248996	119248804;119250123	ES	0.5	50	50	ENSMUST00000050880.8	ENSMUSG00000039908.15	Slc26a11	chr11	protein_coding	solute carrier family 26, member 11
chr11	119250208	119261575	+	119250208	119253043	3pMXE	0.5	50	50	ENSMUST00000123634.8	ENSMUSG00000039908.15	Slc26a11	chr11	protein_coding	solute carrier family 26, member 11
chr11	119260091	119261575	+	119250208	119261575	A5SS	0.5	50	50	ENSMUST00000147366.2	ENSMUSG00000039908.15	Slc26a11	chr11	protein_coding	solute carrier family 26, member 11
chr11	119307470	119308903	+	119307470	119308900	A3SS	0.5	50	50	ENSMUST00000093902.12	ENSMUSG00000070327.15	Rnf213	chr11	protein_coding	ring finger protein 213
chr11	119370495	119371692	+	119370495	119370690	A3SS&ES	0.5	50	50	ENSMUST00000093902.12	ENSMUSG00000070327.15	Rnf213	chr11	protein_coding	ring finger protein 213
chr11	119354495	119355919	-	119339693	119355919	A3SS	0.5	50	50	ENSMUST00000207133.2	ENSMUSG00000109408.2	A930037H05Rik	chr11	lncRNA	RIKEN cDNA A930037H05 gene
chr11	119368957	119379728	-	119356056	119379728	A3SS	0.5	50	50	ENSMUST00000207133.2	ENSMUSG00000109408.2	A930037H05Rik	chr11	lncRNA	RIKEN cDNA A930037H05 gene
chr11	119379826	119381869	-	119379826	119382038	A5SS	0.5	50	50	ENSMUST00000207133.2	ENSMUSG00000109408.2	A930037H05Rik	chr11	lncRNA	RIKEN cDNA A930037H05 gene
chr11	119382285	119390353	+	119382285;119382782	119382611;119390353	ES	0.5	50	50	ENSMUST00000106244.9	ENSMUSG00000039850.17	Endov	chr11	protein_coding	endonuclease V
chr11	119382782	119390672	+	119382782;119390487	119390353;119390672	ES	0.5	50	50	ENSMUST00000106244.9	ENSMUSG00000039850.17	Endov	chr11	protein_coding	endonuclease V
chr11	119390487	119391417	+	119390487;119390711	119390672;119391417	ES	0.33	50	50	ENSMUST00000106244.9	ENSMUSG00000039850.17	Endov	chr11	protein_coding	endonuclease V
chr11	119395993	119396414	+	119395993	119398028	A3SS	0.5	50	50	ENSMUST00000106244.9	ENSMUSG00000039850.17	Endov	chr11	protein_coding	endonuclease V
chr11	119382285;119382782	119382611;119391417	+	119382285;119390487	119390353;119391417	MXE	0.5	100	100	ENSMUST00000153204.9	ENSMUSG00000039850.17	Endov	chr11	protein_coding	endonuclease V
chr11	119382285	119390353	+	119382285	119382611	A3SS&ES	0.5	50	50	ENSMUST00000143817.8	ENSMUSG00000039850.17	Endov	chr11	protein_coding	endonuclease V
chr11	119382782	119390672	+	119390487	119390672	A5SS&ES	0.5	50	50	ENSMUST00000143817.8	ENSMUSG00000039850.17	Endov	chr11	protein_coding	endonuclease V
chr11	119382782	119391417	+	119390711	119391417	A5SS&ES	0.33	50	50	ENSMUST00000143817.8	ENSMUSG00000039850.17	Endov	chr11	protein_coding	endonuclease V
chr11	119382285;119382782	119382611;119390672	+	119382285;119390487	119390353;119390672	MXE	0.5	100	100	ENSMUST00000129327.9	ENSMUSG00000039850.17	Endov	chr11	protein_coding	endonuclease V
chr11	119382285;119382782	119382611;119391417	+	119382285;119390711	119390353;119391417	MXE	0.5	100	100	ENSMUST00000129327.9	ENSMUSG00000039850.17	Endov	chr11	protein_coding	endonuclease V
chr11	119382782	119391417	+	119382782;119390711	119390672;119391417	ES	0.33	50	50	ENSMUST00000140323.9	ENSMUSG00000039850.17	Endov	chr11	protein_coding	endonuclease V
chr11	119382285;119390487	119390353;119391417	+	119382285;119390711	119382611;119391417	MXE	0.5	100	100	ENSMUST00000140323.9	ENSMUSG00000039850.17	Endov	chr11	protein_coding	endonuclease V
chr11	119382782;119390487	119390353;119391417	+	119382782;119390711	119390672;119391417	MXE	0.5	100	100	ENSMUST00000140323.9	ENSMUSG00000039850.17	Endov	chr11	protein_coding	endonuclease V
chr11	119382285	119390353	+	119382782	119390353	5pMXE	0.5	50	50	ENSMUST00000154370.8	ENSMUSG00000039850.17	Endov	chr11	protein_coding	endonuclease V
chr11	119382782	119391417	+	119382782;119390487	119390353;119391417	ES	0.33	50	50	ENSMUST00000154370.8	ENSMUSG00000039850.17	Endov	chr11	protein_coding	endonuclease V
chr11	119382782;119390711	119390353;119391417	+	119382782	119391417	cassetteExon	0.5	100	100	ENSMUST00000134873.9	ENSMUSG00000039850.17	Endov	chr11	protein_coding	endonuclease V
chr11	119690292	119707904	+	119690292;119702846	119702771;119707904	ES	0.5	50	50	ENSMUST00000125583.8	ENSMUSG00000025583.16	Rptor	chr11	protein_coding	regulatory associated protein of MTOR, complex 1
chr11	119547076	119548490	+	119494797	119548490	A5SS	0.5	50	50	ENSMUST00000125583.8	ENSMUSG00000025583.16	Rptor	chr11	protein_coding	regulatory associated protein of MTOR, complex 1
chr11	119734582	119737579	+	119734582;119737249	119737184;119737579	ES	0.5	50	50	ENSMUST00000026671.13	ENSMUSG00000025583.16	Rptor	chr11	protein_coding	regulatory associated protein of MTOR, complex 1
chr11	119747210	119748662	+	119747210;119748279	119748139;119748662	ES	0.5	50	50	ENSMUST00000026671.13	ENSMUSG00000025583.16	Rptor	chr11	protein_coding	regulatory associated protein of MTOR, complex 1
chr11	119756496	119763042	+	119756496;119762424	119762321;119763042	ES	0.5	50	50	ENSMUST00000026671.13	ENSMUSG00000025583.16	Rptor	chr11	protein_coding	regulatory associated protein of MTOR, complex 1
chr11	119756496	119757980	+	119756496	119762321	A3SS	0.33	50	50	ENSMUST00000026671.13	ENSMUSG00000025583.16	Rptor	chr11	protein_coding	regulatory associated protein of MTOR, complex 1
chr11	119763225	119764987	+	119763225	119764980	A3SS	0.5	50	50	ENSMUST00000026671.13	ENSMUSG00000025583.16	Rptor	chr11	protein_coding	regulatory associated protein of MTOR, complex 1
chr11	119708005	119712487	+	119708005	119734508	A3SS	0.5	50	50	ENSMUST00000139728.8	ENSMUSG00000025583.16	Rptor	chr11	protein_coding	regulatory associated protein of MTOR, complex 1
chr11	119713847	119734508	+	119708005	119734508	A5SS	0.5	50	50	ENSMUST00000139728.8	ENSMUSG00000025583.16	Rptor	chr11	protein_coding	regulatory associated protein of MTOR, complex 1
chr11	119690292	119707904	+	119702846	119707904	5pMXE	0.5	50	50	ENSMUST00000126802.2	ENSMUSG00000025583.16	Rptor	chr11	protein_coding	regulatory associated protein of MTOR, complex 1
chr11	119756496	119763042	+	119756496	119757980	3pMXE	0.33	50	50	ENSMUST00000126802.2	ENSMUSG00000025583.16	Rptor	chr11	protein_coding	regulatory associated protein of MTOR, complex 1
chr11	119747210	119748662	+	119748279	119748662	A5SS	0.5	50	50	ENSMUST00000126802.2	ENSMUSG00000025583.16	Rptor	chr11	protein_coding	regulatory associated protein of MTOR, complex 1
chr11	119747210	119748662	+	119747210	119748139	3pMXE	0.5	50	50	ENSMUST00000148860.2	ENSMUSG00000025583.16	Rptor	chr11	protein_coding	regulatory associated protein of MTOR, complex 1
chr11	119804763	119806239	+	119804378	119806239	A5SS	0.33	50	50	ENSMUST00000132197.8	ENSMUSG00000025371.13	Chmp6	chr11	protein_coding	charged multivesicular body protein 6
chr11	119805186	119806239	+	119804378	119806239	A5SS	0.33	50	50	ENSMUST00000132197.8	ENSMUSG00000025371.13	Chmp6	chr11	protein_coding	charged multivesicular body protein 6
chr11	119806380	119806458	+	119806348	119806458	A5SS	0.5	50	50	ENSMUST00000132197.8	ENSMUSG00000025371.13	Chmp6	chr11	protein_coding	charged multivesicular body protein 6
chr11	119805186	119806239	+	119804763	119806239	A5SS	0.33	50	50	ENSMUST00000026434.13	ENSMUSG00000025371.13	Chmp6	chr11	protein_coding	charged multivesicular body protein 6
chr11	119887573	119887835	+	119887573	119887715	A3SS	0.5	50	50	ENSMUST00000106231.8	ENSMUSG00000025372.17	Baiap2	chr11	protein_coding	brain-specific angiogenesis inhibitor 1-associated protein 2
chr11	119834478	119847928	+	119834074	119847928	A5SS	0.5	50	50	ENSMUST00000106231.8	ENSMUSG00000025372.17	Baiap2	chr11	protein_coding	brain-specific angiogenesis inhibitor 1-associated protein 2
chr11	119850891	119850983	+	119848003	119850983	A5SS	0.5	50	50	ENSMUST00000106231.8	ENSMUSG00000025372.17	Baiap2	chr11	protein_coding	brain-specific angiogenesis inhibitor 1-associated protein 2
chr11	119891412	119893864	+	119891412	119891900	3pMXE	0.25	50	50	ENSMUST00000075180.12	ENSMUSG00000025372.17	Baiap2	chr11	protein_coding	brain-specific angiogenesis inhibitor 1-associated protein 2
chr11	119891412	119897185	+	119891412	119891900	3pMXE	0.25	50	50	ENSMUST00000075180.12	ENSMUSG00000025372.17	Baiap2	chr11	protein_coding	brain-specific angiogenesis inhibitor 1-associated protein 2
chr11	119891412	119892953	+	119891412	119891900	A3SS	0.25	50	50	ENSMUST00000075180.12	ENSMUSG00000025372.17	Baiap2	chr11	protein_coding	brain-specific angiogenesis inhibitor 1-associated protein 2
chr11	119891412;119893911	119893864;119897185	+	119891412	119897185	cassetteExon	0.5	100	100	ENSMUST00000026436.10	ENSMUSG00000025372.17	Baiap2	chr11	protein_coding	brain-specific angiogenesis inhibitor 1-associated protein 2
chr11	119891412	119892953	+	119891412	119897185	A3SS	0.25	50	50	ENSMUST00000026436.10	ENSMUSG00000025372.17	Baiap2	chr11	protein_coding	brain-specific angiogenesis inhibitor 1-associated protein 2
chr11	119891412	119892953	+	119891412	119893864	A3SS	0.25	50	50	ENSMUST00000106233.2	ENSMUSG00000025372.17	Baiap2	chr11	protein_coding	brain-specific angiogenesis inhibitor 1-associated protein 2
chr11	119907019	119907554	-	119907019;119907257	119907139;119907554	ES	0.5	50	50	ENSMUST00000064307.10	ENSMUSG00000025375.16	Aatk	chr11	protein_coding	apoptosis-associated tyrosine kinase
chr11	119903161	119903549	-	119903252	119903549	A3SS	0.5	50	50	ENSMUST00000064307.10	ENSMUSG00000025375.16	Aatk	chr11	protein_coding	apoptosis-associated tyrosine kinase
chr11	119909718	119910848	-	119909718	119912228	A5SS	0.5	50	50	ENSMUST00000064307.10	ENSMUSG00000025375.16	Aatk	chr11	protein_coding	apoptosis-associated tyrosine kinase
chr11	119912361	119932559	-	119912361	119937695	A5SS	0.33	50	50	ENSMUST00000064307.10	ENSMUSG00000025375.16	Aatk	chr11	protein_coding	apoptosis-associated tyrosine kinase
chr11	119912361	119937412	-	119912361	119937695	A5SS	0.33	50	50	ENSMUST00000064307.10	ENSMUSG00000025375.16	Aatk	chr11	protein_coding	apoptosis-associated tyrosine kinase
chr11	119912361	119932559	-	119912361	119937412	A5SS	0.33	50	50	ENSMUST00000150730.8	ENSMUSG00000025375.16	Aatk	chr11	protein_coding	apoptosis-associated tyrosine kinase
chr11	119957864	119958772	-	119957864;119958063	119957956;119958772	ES	0.5	50	50	ENSMUST00000106227.8	ENSMUSG00000039781.15	Cep131	chr11	protein_coding	centrosomal protein 131
chr11	119961436	119962185	-	119961436;119961728	119961618;119962185	ES	0.5	50	50	ENSMUST00000106227.8	ENSMUSG00000039781.15	Cep131	chr11	protein_coding	centrosomal protein 131
chr11	119959626;119960820	119960775;119961115	-	119959626	119961115	cassetteExon	0.5	100	100	ENSMUST00000106227.8	ENSMUSG00000039781.15	Cep131	chr11	protein_coding	centrosomal protein 131
chr11	119963802	119963951	-	119963802	119963954	A5SS	0.5	50	50	ENSMUST00000106227.8	ENSMUSG00000039781.15	Cep131	chr11	protein_coding	centrosomal protein 131
chr11	119957864	119958772	-	119958063	119958772	3pMXE	0.5	50	50	ENSMUST00000150463.8	ENSMUSG00000039781.15	Cep131	chr11	protein_coding	centrosomal protein 131
chr11	119961436	119962185	-	119961436	119961618	5pMXE	0.5	50	50	ENSMUST00000150463.8	ENSMUSG00000039781.15	Cep131	chr11	protein_coding	centrosomal protein 131
chr11	119984691	119986170	-	119984691;119985143	119984940;119986170	ES	0.5	50	50	ENSMUST00000093901.12	ENSMUSG00000025377.15	Tepsin	chr11	protein_coding	TEPSIN, adaptor related protein complex 4 accessory protein
chr11	119986435	119986648	-	119986435	119986630	A5SS	0.5	50	50	ENSMUST00000093901.12	ENSMUSG00000025377.15	Tepsin	chr11	protein_coding	TEPSIN, adaptor related protein complex 4 accessory protein
chr11	119986697	119987391	-	119986697	119987407	A5SS	0.5	50	50	ENSMUST00000093901.12	ENSMUSG00000025377.15	Tepsin	chr11	protein_coding	TEPSIN, adaptor related protein complex 4 accessory protein
chr11	119984691	119986170	-	119985143	119986170	3pMXE	0.5	50	50	ENSMUST00000150094.8	ENSMUSG00000025377.15	Tepsin	chr11	protein_coding	TEPSIN, adaptor related protein complex 4 accessory protein
chr11	119990088	119991000	+	119990084	119991000	A5SS	0.5	50	50	ENSMUST00000106223.4	ENSMUSG00000078572.4	Ndufaf8	chr11	protein_coding	NADH:ubiquinone oxidoreductase complex assembly factor 8
chr11	119997436	120000258	-	119997436;119999316	119999293;120000258	ES	0.2	50	50	ENSMUST00000103018.11	ENSMUSG00000061306.17	Slc38a10	chr11	protein_coding	solute carrier family 38, member 10
chr11	120031512	120038547	-	120031512;120032471	120032426;120038547	ES	0.5	50	50	ENSMUST00000103018.11	ENSMUSG00000061306.17	Slc38a10	chr11	protein_coding	solute carrier family 38, member 10
chr11	120032471	120041806	-	120032471;120038664	120038547;120041806	ES	0.33	50	50	ENSMUST00000103018.11	ENSMUSG00000061306.17	Slc38a10	chr11	protein_coding	solute carrier family 38, member 10
chr11	119997436;120000221	120000198;120000258	-	119997436;119999316	119999293;120000258	MXE	0.5	100	100	ENSMUST00000103018.11	ENSMUSG00000061306.17	Slc38a10	chr11	protein_coding	solute carrier family 38, member 10
chr11	119996859	119997260	-	119996862	119997260	A3SS	0.5	50	50	ENSMUST00000103018.11	ENSMUSG00000061306.17	Slc38a10	chr11	protein_coding	solute carrier family 38, member 10
chr11	119999379	120000258	-	119999316	120000258	A3SS	0.2	50	50	ENSMUST00000103018.11	ENSMUSG00000061306.17	Slc38a10	chr11	protein_coding	solute carrier family 38, member 10
chr11	119999769	120000258	-	119999316	120000258	A3SS	0.2	50	50	ENSMUST00000103018.11	ENSMUSG00000061306.17	Slc38a10	chr11	protein_coding	solute carrier family 38, member 10
chr11	120009970	120019249	-	120007847	120019249	A3SS	0.33	50	50	ENSMUST00000103018.11	ENSMUSG00000061306.17	Slc38a10	chr11	protein_coding	solute carrier family 38, member 10
chr11	120015217	120019249	-	120007847	120019249	A3SS	0.33	50	50	ENSMUST00000103018.11	ENSMUSG00000061306.17	Slc38a10	chr11	protein_coding	solute carrier family 38, member 10
chr11	120029918	120031419	-	120029955	120031419	A3SS	0.33	50	50	ENSMUST00000103018.11	ENSMUSG00000061306.17	Slc38a10	chr11	protein_coding	solute carrier family 38, member 10
chr11	120032471	120033444	-	120032471	120038547	A5SS	0.33	50	50	ENSMUST00000103018.11	ENSMUSG00000061306.17	Slc38a10	chr11	protein_coding	solute carrier family 38, member 10
chr11	119997436;119999379	119999293;120000258	-	119997436	120000258	cassetteExon	0.5	100	100	ENSMUST00000045402.14	ENSMUSG00000061306.17	Slc38a10	chr11	protein_coding	solute carrier family 38, member 10
chr11	119997436;119999769	119999293;120000258	-	119997436	120000258	cassetteExon	0.5	100	100	ENSMUST00000045402.14	ENSMUSG00000061306.17	Slc38a10	chr11	protein_coding	solute carrier family 38, member 10
chr11	119997436;120000221	120000198;120000258	-	119997436	120000258	cassetteExon	0.5	100	100	ENSMUST00000045402.14	ENSMUSG00000061306.17	Slc38a10	chr11	protein_coding	solute carrier family 38, member 10
chr11	119997436;119999379	119999293;120000258	-	119997436;120000221	120000198;120000258	MXE	0.5	100	100	ENSMUST00000179094.8	ENSMUSG00000061306.17	Slc38a10	chr11	protein_coding	solute carrier family 38, member 10
chr11	119997436;119999769	119999293;120000258	-	119997436;120000221	120000198;120000258	MXE	0.5	100	100	ENSMUST00000179094.8	ENSMUSG00000061306.17	Slc38a10	chr11	protein_coding	solute carrier family 38, member 10
chr11	119997436	120000198	-	119997436	119999293	5pMXE	0.33	50	50	ENSMUST00000148503.8	ENSMUSG00000061306.17	Slc38a10	chr11	protein_coding	solute carrier family 38, member 10
chr11	119997436	120000258	-	119997436	119999293	5pMXE	0.33	50	50	ENSMUST00000148503.8	ENSMUSG00000061306.17	Slc38a10	chr11	protein_coding	solute carrier family 38, member 10
chr11	119999769	120000258	-	119999379	120000258	A3SS	0.2	50	50	ENSMUST00000129128.8	ENSMUSG00000061306.17	Slc38a10	chr11	protein_coding	solute carrier family 38, member 10
chr11	119997436	120000258	-	119999769	120000258	3pMXE	0.2	50	50	ENSMUST00000124997.2	ENSMUSG00000061306.17	Slc38a10	chr11	protein_coding	solute carrier family 38, member 10
chr11	120000221	120000258	-	119999769	120000258	A3SS	0.2	50	50	ENSMUST00000124997.2	ENSMUSG00000061306.17	Slc38a10	chr11	protein_coding	solute carrier family 38, member 10
chr11	120031512;120032471	120032426;120041806	-	120031512	120041806	cassetteExon	0.5	100	100	ENSMUST00000154444.9	ENSMUSG00000061306.17	Slc38a10	chr11	protein_coding	solute carrier family 38, member 10
chr11	120031512;120038664	120038547;120041806	-	120031512	120041806	cassetteExon	0.5	100	100	ENSMUST00000154444.9	ENSMUSG00000061306.17	Slc38a10	chr11	protein_coding	solute carrier family 38, member 10
chr11	120029918	120031419	-	120007847	120031419	A3SS	0.33	50	50	ENSMUST00000154444.9	ENSMUSG00000061306.17	Slc38a10	chr11	protein_coding	solute carrier family 38, member 10
chr11	120029955	120031419	-	120007847	120031419	A3SS	0.33	50	50	ENSMUST00000154444.9	ENSMUSG00000061306.17	Slc38a10	chr11	protein_coding	solute carrier family 38, member 10
chr11	120007847	120019249	-	120007847	120031419	A5SS	0.5	50	50	ENSMUST00000154444.9	ENSMUSG00000061306.17	Slc38a10	chr11	protein_coding	solute carrier family 38, member 10
chr11	120015217	120019249	-	120009970	120019249	A3SS	0.33	50	50	ENSMUST00000076697.13	ENSMUSG00000061306.17	Slc38a10	chr11	protein_coding	solute carrier family 38, member 10
chr11	120031512;120038664	120038547;120041806	-	120031512;120032471	120032426;120041806	MXE	0.5	100	100	ENSMUST00000132239.8	ENSMUSG00000061306.17	Slc38a10	chr11	protein_coding	solute carrier family 38, member 10
chr11	120032471	120033444	-	120032471	120041806	A5SS	0.33	50	50	ENSMUST00000132239.8	ENSMUSG00000061306.17	Slc38a10	chr11	protein_coding	solute carrier family 38, member 10
chr11	120127470	120127686	+	120123933	120127686	A5SS	0.5	50	50	ENSMUST00000122148.8	ENSMUSG00000039741.16	Bahcc1	chr11	protein_coding	BAH domain and coiled-coil containing 1
chr11	120238175;120238362	120238318;120238462	-	120238175	120238462	cassetteExon	0.5	100	100	ENSMUST00000071555.13	ENSMUSG00000062825.16	Actg1	chr11	protein_coding	actin, gamma, cytoplasmic 1
chr11	120237284	120237463	-	120237359	120237463	A3SS	0.5	50	50	ENSMUST00000071555.13	ENSMUSG00000062825.16	Actg1	chr11	protein_coding	actin, gamma, cytoplasmic 1
chr11	120237644	120238689	-	120237644	120237737	A5SS&ES	0.5	50	50	ENSMUST00000071555.13	ENSMUSG00000062825.16	Actg1	chr11	protein_coding	actin, gamma, cytoplasmic 1
chr11	120238175	120238462	-	120238362	120238462	A3SS	0.5	50	50	ENSMUST00000141406.8	ENSMUSG00000062825.16	Actg1	chr11	protein_coding	actin, gamma, cytoplasmic 1
chr11	120264086	120264708	-	120264069	120264708	A3SS	0.5	50	50	ENSMUST00000135635.8	ENSMUSG00000025384.16	Faap100	chr11	protein_coding	Fanconi anemia core complex associated protein 100
chr11	120268487	120269249	-	120268487	120269154	A5SS	0.33	50	50	ENSMUST00000135635.8	ENSMUSG00000025384.16	Faap100	chr11	protein_coding	Fanconi anemia core complex associated protein 100
chr11	120268487	120269368	-	120268487	120269154	A5SS	0.33	50	50	ENSMUST00000135635.8	ENSMUSG00000025384.16	Faap100	chr11	protein_coding	Fanconi anemia core complex associated protein 100
chr11	120268487	120269368	-	120268487;120269272	120269154;120269368	ES	0.5	50	50	ENSMUST00000026448.10	ENSMUSG00000025384.16	Faap100	chr11	protein_coding	Fanconi anemia core complex associated protein 100
chr11	120268487;120269272	120269249;120269368	-	120268487	120269368	cassetteExon	0.5	100	100	ENSMUST00000154826.2	ENSMUSG00000025384.16	Faap100	chr11	protein_coding	Fanconi anemia core complex associated protein 100
chr11	120268487	120269368	-	120268487	120269249	5pMXE	0.33	50	50	ENSMUST00000153015.2	ENSMUSG00000025384.16	Faap100	chr11	protein_coding	Fanconi anemia core complex associated protein 100
chr11	120275485	120280194	-	120275485;120276691	120276596;120280194	ES	0.5	50	50	ENSMUST00000044271.15	ENSMUSG00000039703.16	Nploc4	chr11	protein_coding	NPL4 homolog, ubiquitin recognition factor
chr11	120300509	120304386	-	120300509;120302570	120302484;120304386	ES	0.5	50	50	ENSMUST00000044271.15	ENSMUSG00000039703.16	Nploc4	chr11	protein_coding	NPL4 homolog, ubiquitin recognition factor
chr11	120333643;120334117	120333996;120334931	+	120333643	120334931	cassetteExon	0.5	100	100	ENSMUST00000044105.9	ENSMUSG00000039691.11	Tspan10	chr11	protein_coding	tetraspanin 10
chr11	120339469	120341293	-	120339469	120341417	A5SS	0.5	50	50	ENSMUST00000141795.2	ENSMUSG00000025386.3	Pde6g	chr11	protein_coding	phosphodiesterase 6G, cGMP-specific, rod, gamma
chr11	120347988	120348669	-	120347988	120348639	A5SS	0.5	50	50	ENSMUST00000044007.3	ENSMUSG00000039670.3	Oxld1	chr11	protein_coding	oxidoreductase like domain containing 1
chr11	120352624	120353091	+	120352624;120352911	120352832;120353091	ES	0.5	50	50	ENSMUST00000058370.14	ENSMUSG00000049957.15	Ccdc137	chr11	protein_coding	coiled-coil domain containing 137
chr11	120349571	120349782	+	120349571	120350868	A3SS	0.25	50	50	ENSMUST00000058370.14	ENSMUSG00000049957.15	Ccdc137	chr11	protein_coding	coiled-coil domain containing 137
chr11	120349571	120350536	+	120349571	120350868	A3SS	0.25	50	50	ENSMUST00000058370.14	ENSMUSG00000049957.15	Ccdc137	chr11	protein_coding	coiled-coil domain containing 137
chr11	120349571	120350873	+	120349571	120350868	A3SS	0.25	50	50	ENSMUST00000058370.14	ENSMUSG00000049957.15	Ccdc137	chr11	protein_coding	coiled-coil domain containing 137
chr11	120349571	120350536	+	120349571	120349782	3pMXE	0.25	50	50	ENSMUST00000150400.8	ENSMUSG00000049957.15	Ccdc137	chr11	protein_coding	coiled-coil domain containing 137
chr11	120349571	120350873	+	120349571	120349782	3pMXE	0.25	50	50	ENSMUST00000150400.8	ENSMUSG00000049957.15	Ccdc137	chr11	protein_coding	coiled-coil domain containing 137
chr11	120349571	120350536	+	120349571	120350873	A3SS	0.25	50	50	ENSMUST00000175970.8	ENSMUSG00000049957.15	Ccdc137	chr11	protein_coding	coiled-coil domain containing 137
chr11	120352624	120353091	+	120352624	120352832	A3SS	0.5	50	50	ENSMUST00000145702.2	ENSMUSG00000049957.15	Ccdc137	chr11	protein_coding	coiled-coil domain containing 137
chr11	120357558	120358008	-	120357593	120358008	A3SS	0.5	50	50	ENSMUST00000143233.8	ENSMUSG00000057594.13	Arl16	chr11	protein_coding	ADP-ribosylation factor-like 16
chr11	120357593	120357836	-	120357593	120358008	A5SS	0.5	50	50	ENSMUST00000143233.8	ENSMUSG00000057594.13	Arl16	chr11	protein_coding	ADP-ribosylation factor-like 16
chr11	120356647;120356925	120356810;120357480	-	120356647	120357480	cassetteExon	0.5	100	100	ENSMUST00000124970.8	ENSMUSG00000057594.13	Arl16	chr11	protein_coding	ADP-ribosylation factor-like 16
chr11	120356647	120357480	-	120356925	120357480	A3SS	0.5	50	50	ENSMUST00000154136.8	ENSMUSG00000057594.13	Arl16	chr11	protein_coding	ADP-ribosylation factor-like 16
chr11	120360953	120362354	+	120360953	120362306	A3SS	0.5	50	50	ENSMUST00000141826.2	ENSMUSG00000025793.18	Hgs	chr11	protein_coding	HGF-regulated tyrosine kinase substrate
chr11	120369580	120369913	+	120369580	120369916	A3SS	0.33	50	50	ENSMUST00000106205.9	ENSMUSG00000025793.18	Hgs	chr11	protein_coding	HGF-regulated tyrosine kinase substrate
chr11	120369580	120370063	+	120369580	120369916	A3SS	0.33	50	50	ENSMUST00000106205.9	ENSMUSG00000025793.18	Hgs	chr11	protein_coding	HGF-regulated tyrosine kinase substrate
chr11	120369580	120370063	+	120369580	120369913	A3SS	0.33	50	50	ENSMUST00000106203.9	ENSMUSG00000025793.18	Hgs	chr11	protein_coding	HGF-regulated tyrosine kinase substrate
chr11	120418029	120422259	-	120418029	120421167	5pMXE	0.5	50	50	ENSMUST00000140989.2	ENSMUSG00000084983.8	Gm11789	chr11	lncRNA	predicted gene 11789
chr11	120419985	120421167	-	120418029	120421167	A3SS	0.5	50	50	ENSMUST00000140989.2	ENSMUSG00000084983.8	Gm11789	chr11	lncRNA	predicted gene 11789
chr11	120418029	120422259	-	120418029;120421301	120421167;120422259	ES	0.5	50	50	ENSMUST00000139357.8	ENSMUSG00000084983.8	Gm11789	chr11	lncRNA	predicted gene 11789
chr11	120418029	120422259	-	120421301	120422259	3pMXE	0.5	50	50	ENSMUST00000123579.2	ENSMUSG00000084983.8	Gm11789	chr11	lncRNA	predicted gene 11789
chr11	120425844	120426845	+	120425844	120426886	A3SS	0.5	50	50	ENSMUST00000026119.8	ENSMUSG00000025127.16	Gcgr	chr11	protein_coding	glucagon receptor
chr11	120426993	120427076	+	120426993	120427071	A3SS	0.5	50	50	ENSMUST00000026119.8	ENSMUSG00000025127.16	Gcgr	chr11	protein_coding	glucagon receptor
chr11	120462553	120463483	-	120453371	120463483	A3SS	0.5	50	50	ENSMUST00000168360.2	ENSMUSG00000025130.12	P4hb	chr11	protein_coding	prolyl 4-hydroxylase, beta polypeptide
chr11	120453371	120453481	-	120453371	120463483	A5SS	0.5	50	50	ENSMUST00000168360.2	ENSMUSG00000025130.12	P4hb	chr11	protein_coding	prolyl 4-hydroxylase, beta polypeptide
chr11	120471219	120471816	-	120471219	120472348	A5SS	0.5	50	50	ENSMUST00000106197.10	ENSMUSG00000025132.14	Arhgdia	chr11	protein_coding	Rho GDP dissociation inhibitor (GDI) alpha
chr11	120486144	120486434	-	120486144	120486746	A5SS	0.5	50	50	ENSMUST00000026125.3	ENSMUSG00000025134.3	Alyref	chr11	protein_coding	Aly/REF export factor
chr11	120489696	120490068	+	120489430	120490068	A5SS	0.5	50	50	ENSMUST00000026128.10	ENSMUSG00000025135.13	Anapc11	chr11	protein_coding	anaphase promoting complex subunit 11
chr11	120495011	120496107	+	120490194	120496107	A5SS	0.5	50	50	ENSMUST00000026128.10	ENSMUSG00000025135.13	Anapc11	chr11	protein_coding	anaphase promoting complex subunit 11
chr11	120499565	120499641	+	120499553	120499641	A5SS	0.5	50	50	ENSMUST00000106194.8	ENSMUSG00000044034.12	Npb	chr11	protein_coding	neuropeptide B
chr11	120499565	120499677	+	120499565	120499641	A3SS	0.5	50	50	ENSMUST00000106195.3	ENSMUSG00000044034.12	Npb	chr11	protein_coding	neuropeptide B
chr11	120503427	120504205	-	120503427;120503909	120503856;120504205	ES	0.5	50	50	ENSMUST00000026129.16	ENSMUSG00000025137.16	Pcyt2	chr11	protein_coding	phosphate cytidylyltransferase 2, ethanolamine
chr11	120504600	120505157	-	120504551	120505157	A3SS	0.5	50	50	ENSMUST00000026129.16	ENSMUSG00000025137.16	Pcyt2	chr11	protein_coding	phosphate cytidylyltransferase 2, ethanolamine
chr11	120503427	120503672	-	120503427	120503856	A5SS	0.33	50	50	ENSMUST00000026129.16	ENSMUSG00000025137.16	Pcyt2	chr11	protein_coding	phosphate cytidylyltransferase 2, ethanolamine
chr11	120503427;120503909	120503672;120504205	-	120503427	120504205	cassetteExon	0.5	100	100	ENSMUST00000106188.4	ENSMUSG00000025137.16	Pcyt2	chr11	protein_coding	phosphate cytidylyltransferase 2, ethanolamine
chr11	120503427	120504205	-	120503427	120503856	5pMXE	0.33	50	50	ENSMUST00000134671.2	ENSMUSG00000025137.16	Pcyt2	chr11	protein_coding	phosphate cytidylyltransferase 2, ethanolamine
chr11	120503427	120504205	-	120503909	120504205	A3SS	0.5	50	50	ENSMUST00000124468.8	ENSMUSG00000025137.16	Pcyt2	chr11	protein_coding	phosphate cytidylyltransferase 2, ethanolamine
chr11	120509875;120510116	120509975;120510989	-	120509875	120510989	cassetteExon	0.5	100	100	ENSMUST00000153532.8	ENSMUSG00000025138.15	Sirt7	chr11	protein_coding	sirtuin 7
chr11	120509875;120510593	120510509;120510989	-	120509875	120510989	cassetteExon	0.5	100	100	ENSMUST00000153532.8	ENSMUSG00000025138.15	Sirt7	chr11	protein_coding	sirtuin 7
chr11	120514891	120515316	-	120513037	120515316	A3SS	0.5	50	50	ENSMUST00000153532.8	ENSMUSG00000025138.15	Sirt7	chr11	protein_coding	sirtuin 7
chr11	120509875;120510116	120509975;120510989	-	120509875;120510593	120510509;120510989	MXE	0.5	100	100	ENSMUST00000134255.8	ENSMUSG00000025138.15	Sirt7	chr11	protein_coding	sirtuin 7
chr11	120509875	120510509	-	120509875	120509975	5pMXE	0.33	50	50	ENSMUST00000154714.2	ENSMUSG00000025138.15	Sirt7	chr11	protein_coding	sirtuin 7
chr11	120509875	120510989	-	120509875	120509975	5pMXE	0.33	50	50	ENSMUST00000154714.2	ENSMUSG00000025138.15	Sirt7	chr11	protein_coding	sirtuin 7
chr11	120522266	120524188	-	120520707	120524188	A3SS	0.5	50	50	ENSMUST00000058162.14	ENSMUSG00000051510.14	Mafg	chr11	protein_coding	v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)
chr11	120520707	120520812	-	120520707	120524188	A5SS	0.33	50	50	ENSMUST00000058162.14	ENSMUSG00000051510.14	Mafg	chr11	protein_coding	v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)
chr11	120520707	120521314	-	120520707	120524188	A5SS	0.33	50	50	ENSMUST00000058162.14	ENSMUSG00000051510.14	Mafg	chr11	protein_coding	v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)
chr11	120520707;120520842	120520812;120521314	-	120520707	120521314	cassetteExon	0.5	100	100	ENSMUST00000106182.8	ENSMUSG00000051510.14	Mafg	chr11	protein_coding	v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)
chr11	120520707	120521314	-	120520707	120520812	5pMXE	0.33	50	50	ENSMUST00000106180.2	ENSMUSG00000051510.14	Mafg	chr11	protein_coding	v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)
chr11	120533788	120534506	-	120533788	120533985	5pMXE	0.5	50	50	ENSMUST00000170556.8	ENSMUSG00000025140.16	Pycr1	chr11	protein_coding	pyrroline-5-carboxylate reductase 1
chr11	120533788	120534506	-	120533788;120534113	120533985;120534506	ES	0.5	50	50	ENSMUST00000026133.15	ENSMUSG00000025140.16	Pycr1	chr11	protein_coding	pyrroline-5-carboxylate reductase 1
chr11	120534113	120534407	-	120534113	120534506	A5SS	0.33	50	50	ENSMUST00000026133.15	ENSMUSG00000025140.16	Pycr1	chr11	protein_coding	pyrroline-5-carboxylate reductase 1
chr11	120534113	120534529	-	120534113	120534506	A5SS	0.33	50	50	ENSMUST00000026133.15	ENSMUSG00000025140.16	Pycr1	chr11	protein_coding	pyrroline-5-carboxylate reductase 1
chr11	120534113	120534529	-	120534113	120534407	5pMXE	0.33	50	50	ENSMUST00000141254.8	ENSMUSG00000025140.16	Pycr1	chr11	protein_coding	pyrroline-5-carboxylate reductase 1
chr11	120537267	120537848	-	120537267	120538465	A5SS	0.5	50	50	ENSMUST00000026134.3	ENSMUSG00000025141.4	Myadml2	chr11	protein_coding	myeloid-associated differentiation marker-like 2
chr11	120551191	120551947	-	120551191	120551615	5pMXE	0.5	50	50	ENSMUST00000106178.9	ENSMUSG00000042988.11	Notum	chr11	protein_coding	notum palmitoleoyl-protein carboxylesterase
chr11	120563996	120568337	+	120563996	120564866	3pMXE	0.5	50	50	ENSMUST00000169964.2	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120563969	120564866	+	120563996	120564866	A5SS	0.14	50	50	ENSMUST00000169964.2	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120564233	120564866	+	120563996	120564866	A5SS	0.14	50	50	ENSMUST00000169964.2	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120564388	120564866	+	120563996	120564866	A5SS	0.14	50	50	ENSMUST00000169964.2	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120564402	120564866	+	120563996	120564866	A5SS	0.14	50	50	ENSMUST00000169964.2	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120564440	120564866	+	120563996	120564866	A5SS	0.14	50	50	ENSMUST00000169964.2	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120564627	120564866	+	120563996	120564866	A5SS	0.14	50	50	ENSMUST00000169964.2	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120563996	120568337	+	120563996;120564921	120564866;120568337	ES	0.2	50	50	ENSMUST00000026135.15	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120593376	120594898	+	120593376;120594491	120594429;120594898	ES	0.5	50	50	ENSMUST00000026135.15	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120599535	120599897	+	120599535;120599825	120599756;120599897	ES	0.5	50	50	ENSMUST00000026135.15	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120569346	120579295	+	120569346	120577470	A3SS&ES	0.33	50	50	ENSMUST00000026135.15	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120569346	120591950	+	120569346	120577470	A3SS&ES	0.33	50	50	ENSMUST00000026135.15	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120599825	120599938	+	120599825	120599897	A3SS	0.5	50	50	ENSMUST00000026135.15	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120567519	120568337	+	120564921	120568337	A5SS	0.2	50	50	ENSMUST00000026135.15	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120568095	120568337	+	120564921	120568337	A5SS	0.2	50	50	ENSMUST00000026135.15	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120568250	120568337	+	120564921	120568337	A5SS	0.2	50	50	ENSMUST00000026135.15	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120564233	120564866	+	120563969	120564866	A5SS	0.14	50	50	ENSMUST00000171700.2	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120564388	120564866	+	120563969	120564866	A5SS	0.14	50	50	ENSMUST00000171700.2	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120564402	120564866	+	120563969	120564866	A5SS	0.14	50	50	ENSMUST00000171700.2	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120564440	120564866	+	120563969	120564866	A5SS	0.14	50	50	ENSMUST00000171700.2	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120564627	120564866	+	120563969	120564866	A5SS	0.14	50	50	ENSMUST00000171700.2	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120593376	120599484	+	120593376;120594950	120594898;120599484	ES	0.33	50	50	ENSMUST00000106158.9	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120569346	120579295	+	120569346	120591950	A3SS	0.33	50	50	ENSMUST00000168097.8	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120567519	120568337	+	120563996	120568337	A5SS	0.2	50	50	ENSMUST00000103016.8	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120568095	120568337	+	120563996	120568337	A5SS	0.2	50	50	ENSMUST00000103016.8	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120568250	120568337	+	120563996	120568337	A5SS	0.2	50	50	ENSMUST00000103016.8	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120599535	120599897	+	120599535	120599756	3pMXE	0.5	50	50	ENSMUST00000168714.9	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120577527	120579355	+	120577527	120599484	A3SS	0.5	50	50	ENSMUST00000168714.9	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120593376	120599484	+	120577527	120599484	A5SS	0.33	50	50	ENSMUST00000168714.9	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120594950	120599484	+	120577527	120599484	A5SS	0.33	50	50	ENSMUST00000168714.9	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120564233	120564866	+	120564440	120564866	A5SS	0.14	50	50	ENSMUST00000135346.8	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120564388	120564866	+	120564440	120564866	A5SS	0.14	50	50	ENSMUST00000135346.8	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120564402	120564866	+	120564440	120564866	A5SS	0.14	50	50	ENSMUST00000135346.8	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120564627	120564866	+	120564440	120564866	A5SS	0.14	50	50	ENSMUST00000135346.8	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120564233	120564866	+	120564402	120564866	A5SS	0.14	50	50	ENSMUST00000127269.8	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120564388	120564866	+	120564402	120564866	A5SS	0.14	50	50	ENSMUST00000127269.8	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120564627	120564866	+	120564402	120564866	A5SS	0.14	50	50	ENSMUST00000127269.8	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120564388	120564866	+	120564233	120564866	A5SS	0.14	50	50	ENSMUST00000131727.9	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120564627	120564866	+	120564233	120564866	A5SS	0.14	50	50	ENSMUST00000131727.9	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120564388	120564866	+	120564627	120564866	A5SS	0.14	50	50	ENSMUST00000149389.8	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120568095	120568337	+	120567519	120568337	A5SS	0.2	50	50	ENSMUST00000106160.9	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120568250	120568337	+	120567519	120568337	A5SS	0.2	50	50	ENSMUST00000106160.9	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120568250	120568337	+	120568095	120568337	A5SS	0.2	50	50	ENSMUST00000129644.9	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120593376	120594429	+	120593376	120599484	A3SS	0.33	50	50	ENSMUST00000168947.2	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120599535	120599897	+	120599825	120599897	5pMXE	0.5	50	50	ENSMUST00000151531.2	ENSMUSG00000025142.19	Aspscr1	chr11	protein_coding	alveolar soft part sarcoma chromosome region, candidate 1 (human)
chr11	120602304	120602529	-	120602327	120602529	A3SS	0.5	50	50	ENSMUST00000128543.2	ENSMUSG00000025144.18	Cenpx	chr11	protein_coding	centromere protein X
chr11	120602721	120604519	-	120602721;120603538	120603266;120604519	ES	0.33	50	50	ENSMUST00000106154.8	ENSMUSG00000025144.18	Cenpx	chr11	protein_coding	centromere protein X
chr11	120603365	120604519	-	120603538	120604519	A3SS	0.33	50	50	ENSMUST00000106154.8	ENSMUSG00000025144.18	Cenpx	chr11	protein_coding	centromere protein X
chr11	120602721	120604519	-	120602721;120603365	120603266;120604519	ES	0.33	50	50	ENSMUST00000106155.4	ENSMUSG00000025144.18	Cenpx	chr11	protein_coding	centromere protein X
chr11	120609379	120609866	+	120609379;120609546	120609476;120609866	ES	0.5	50	50	ENSMUST00000026139.14	ENSMUSG00000025145.14	Lrrc45	chr11	protein_coding	leucine rich repeat containing 45
chr11	120604879	120604994	+	120604879	120605099	A3SS	0.5	50	50	ENSMUST00000026139.14	ENSMUSG00000025145.14	Lrrc45	chr11	protein_coding	leucine rich repeat containing 45
chr11	120612446	120613057	+	120612467	120613057	A5SS	0.5	50	50	ENSMUST00000018156.12	ENSMUSG00000018012.12	Rac3	chr11	protein_coding	Rac family small GTPase 3
chr11	120616832	120616914	-	120616722	120616914	A3SS	0.5	50	50	ENSMUST00000106148.10	ENSMUSG00000039450.12	Dcxr	chr11	protein_coding	dicarbonyl L-xylulose reductase
chr11	120621452	120621832	-	120621725	120621832	A3SS&ES	0.5	50	50	ENSMUST00000026148.9	ENSMUSG00000025150.11	Cbr2	chr11	protein_coding	carbonyl reductase 2
chr11	120675168;120675551	120675473;120675947	+	120675168	120675947	cassetteExon	0.5	100	100	ENSMUST00000132422.2	ENSMUSG00000025156.18	Gps1	chr11	protein_coding	G protein pathway suppressor 1
chr11	120677675	120677838	+	120677675	120677835	A3SS	0.5	50	50	ENSMUST00000153678.8	ENSMUSG00000025156.18	Gps1	chr11	protein_coding	G protein pathway suppressor 1
chr11	120675168	120675947	+	120675551	120675947	5pMXE	0.5	50	50	ENSMUST00000172809.2	ENSMUSG00000025156.18	Gps1	chr11	protein_coding	G protein pathway suppressor 1
chr11	120685804	120686303	-	120685837	120686303	A3SS	0.5	50	50	ENSMUST00000106135.8	ENSMUSG00000025155.16	Dus1l	chr11	protein_coding	dihydrouridine synthase 1-like (S. cerevisiae)
chr11	120686549	120686765	-	120686549	120687045	A5SS	0.25	50	50	ENSMUST00000106135.8	ENSMUSG00000025155.16	Dus1l	chr11	protein_coding	dihydrouridine synthase 1-like (S. cerevisiae)
chr11	120686549	120686969	-	120686549	120687045	A5SS	0.25	50	50	ENSMUST00000106135.8	ENSMUSG00000025155.16	Dus1l	chr11	protein_coding	dihydrouridine synthase 1-like (S. cerevisiae)
chr11	120686549	120687136	-	120686549	120687045	A5SS	0.25	50	50	ENSMUST00000106135.8	ENSMUSG00000025155.16	Dus1l	chr11	protein_coding	dihydrouridine synthase 1-like (S. cerevisiae)
chr11	120686549	120686765	-	120686549	120686969	A5SS	0.25	50	50	ENSMUST00000026151.11	ENSMUSG00000025155.16	Dus1l	chr11	protein_coding	dihydrouridine synthase 1-like (S. cerevisiae)
chr11	120686549	120687136	-	120686549	120686969	A5SS	0.25	50	50	ENSMUST00000026151.11	ENSMUSG00000025155.16	Dus1l	chr11	protein_coding	dihydrouridine synthase 1-like (S. cerevisiae)
chr11	120686549	120686765	-	120686549	120687136	A5SS	0.25	50	50	ENSMUST00000106133.8	ENSMUSG00000025155.16	Dus1l	chr11	protein_coding	dihydrouridine synthase 1-like (S. cerevisiae)
chr11	120704866	120705309	-	120704866	120705303	A5SS	0.5	50	50	ENSMUST00000055655.9	ENSMUSG00000025153.10	Fasn	chr11	protein_coding	fatty acid synthase
chr11	120713678	120714052	-	120713678	120714856	A5SS	0.5	50	50	ENSMUST00000055655.9	ENSMUSG00000025153.10	Fasn	chr11	protein_coding	fatty acid synthase
chr11	120757502;120762088	120761874;120764412	-	120757502	120764412	cassetteExon	0.5	100	100	ENSMUST00000056781.5	ENSMUSG00000048445.7	Ccdc57	chr11	protein_coding	coiled-coil domain containing 57
chr11	120773584	120776059	-	120772741	120776059	A3SS	0.5	50	50	ENSMUST00000056781.5	ENSMUSG00000048445.7	Ccdc57	chr11	protein_coding	coiled-coil domain containing 57
chr11	120772741	120772839	-	120772741	120776059	A5SS	0.5	50	50	ENSMUST00000056781.5	ENSMUSG00000048445.7	Ccdc57	chr11	protein_coding	coiled-coil domain containing 57
chr11	120839976	120845000	+	120839405	120845000	A5SS	0.25	50	50	ENSMUST00000070653.13	ENSMUSG00000025161.17	Slc16a3	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 3
chr11	120839976	120846052	+	120845094	120846052	A5SS&ES	0.5	50	50	ENSMUST00000070653.13	ENSMUSG00000025161.17	Slc16a3	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 3
chr11	120841723	120845000	+	120839405	120845000	A5SS	0.25	50	50	ENSMUST00000070653.13	ENSMUSG00000025161.17	Slc16a3	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 3
chr11	120842319	120845000	+	120839405	120845000	A5SS	0.25	50	50	ENSMUST00000070653.13	ENSMUSG00000025161.17	Slc16a3	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 3
chr11	120839976	120846052	+	120839976;120845094	120845000;120846052	ES	0.5	50	50	ENSMUST00000154187.8	ENSMUSG00000025161.17	Slc16a3	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 3
chr11	120841723	120845000	+	120839976	120845000	A5SS	0.25	50	50	ENSMUST00000154187.8	ENSMUSG00000025161.17	Slc16a3	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 3
chr11	120842319	120845000	+	120839976	120845000	A5SS	0.25	50	50	ENSMUST00000154187.8	ENSMUSG00000025161.17	Slc16a3	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 3
chr11	120842319	120845000	+	120841723	120845000	A5SS	0.25	50	50	ENSMUST00000133029.2	ENSMUSG00000025161.17	Slc16a3	chr11	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 3
chr11	120864795;120871580	120871492;120874059	-	120864795	120874059	cassetteExon	0.5	100	100	ENSMUST00000239115.2	ENSMUSG00000025162.19	Csnk1d	chr11	protein_coding	casein kinase 1, delta
chr11	120854732	120858821	-	120850121	120858821	A3SS	0.25	50	50	ENSMUST00000239115.2	ENSMUSG00000025162.19	Csnk1d	chr11	protein_coding	casein kinase 1, delta
chr11	120855836	120858821	-	120850121	120858821	A3SS	0.25	50	50	ENSMUST00000239115.2	ENSMUSG00000025162.19	Csnk1d	chr11	protein_coding	casein kinase 1, delta
chr11	120858562	120858821	-	120850121	120858821	A3SS	0.25	50	50	ENSMUST00000239115.2	ENSMUSG00000025162.19	Csnk1d	chr11	protein_coding	casein kinase 1, delta
chr11	120860020	120861892	-	120860020	120862393	A5SS	0.5	50	50	ENSMUST00000239115.2	ENSMUSG00000025162.19	Csnk1d	chr11	protein_coding	casein kinase 1, delta
chr11	120874169	120881608	-	120874169	120881761	A5SS	0.5	50	50	ENSMUST00000239115.2	ENSMUSG00000025162.19	Csnk1d	chr11	protein_coding	casein kinase 1, delta
chr11	120854732	120858821	-	120854732;120855836	120855774;120858821	ES	0.33	50	50	ENSMUST00000070575.14	ENSMUSG00000025162.19	Csnk1d	chr11	protein_coding	casein kinase 1, delta
chr11	120858562	120858821	-	120855836	120858821	A3SS	0.33	50	50	ENSMUST00000070575.14	ENSMUSG00000025162.19	Csnk1d	chr11	protein_coding	casein kinase 1, delta
chr11	120855836	120856410	-	120855836	120858821	A5SS	0.5	50	50	ENSMUST00000070575.14	ENSMUSG00000025162.19	Csnk1d	chr11	protein_coding	casein kinase 1, delta
chr11	120858562	120858821	-	120854732	120858821	A3SS	0.25	50	50	ENSMUST00000018274.10	ENSMUSG00000025162.19	Csnk1d	chr11	protein_coding	casein kinase 1, delta
chr11	120947193	120954343	-	120947193;120954129	120954022;120954343	ES	0.33	50	50	ENSMUST00000039309.12	ENSMUSG00000039364.14	Sectm1b	chr11	protein_coding	secreted and transmembrane 1B
chr11	120954212	120954343	-	120954129	120954343	A3SS	0.33	50	50	ENSMUST00000039309.12	ENSMUSG00000039364.14	Sectm1b	chr11	protein_coding	secreted and transmembrane 1B
chr11	120947193	120947367	-	120947193	120954022	A5SS	0.33	50	50	ENSMUST00000039309.12	ENSMUSG00000039364.14	Sectm1b	chr11	protein_coding	secreted and transmembrane 1B
chr11	120947193;120954212	120954022;120954343	-	120947193	120954343	cassetteExon	0.5	100	100	ENSMUST00000168459.8	ENSMUSG00000039364.14	Sectm1b	chr11	protein_coding	secreted and transmembrane 1B
chr11	120947193	120947367	-	120947193	120954343	A5SS	0.33	50	50	ENSMUST00000168459.8	ENSMUSG00000039364.14	Sectm1b	chr11	protein_coding	secreted and transmembrane 1B
chr11	120947193	120954343	-	120947193	120954022	5pMXE	0.33	50	50	ENSMUST00000130786.2	ENSMUSG00000039364.14	Sectm1b	chr11	protein_coding	secreted and transmembrane 1B
chr11	120959672;120960615	120960414;120966392	-	120959672;120959914	120959861;120966392	MXE	0.5	100	100	ENSMUST00000106119.9	ENSMUSG00000025165.13	Sectm1a	chr11	protein_coding	secreted and transmembrane 1A
chr11	120959914;120960615	120960414;120966392	-	120959914	120966392	cassetteExon	0.5	100	100	ENSMUST00000106119.9	ENSMUSG00000025165.13	Sectm1a	chr11	protein_coding	secreted and transmembrane 1A
chr11	120959672;120960722	120960414;120966392	-	120959672;120959914	120959861;120966392	MXE	0.5	100	100	ENSMUST00000106119.9	ENSMUSG00000025165.13	Sectm1a	chr11	protein_coding	secreted and transmembrane 1A
chr11	120959914;120960722	120960414;120966392	-	120959914	120966392	cassetteExon	0.5	100	100	ENSMUST00000106119.9	ENSMUSG00000025165.13	Sectm1a	chr11	protein_coding	secreted and transmembrane 1A
chr11	120959563	120959861	-	120959672	120959861	A3SS	0.5	50	50	ENSMUST00000106119.9	ENSMUSG00000025165.13	Sectm1a	chr11	protein_coding	secreted and transmembrane 1A
chr11	120959672	120960414	-	120959672;120959914	120959861;120960414	ES	0.5	50	50	ENSMUST00000026162.12	ENSMUSG00000025165.13	Sectm1a	chr11	protein_coding	secreted and transmembrane 1A
chr11	120960615	120966392	-	120960722	120966392	A3SS	0.33	50	50	ENSMUST00000026162.12	ENSMUSG00000025165.13	Sectm1a	chr11	protein_coding	secreted and transmembrane 1A
chr11	120959672	120960414	-	120959914	120960414	3pMXE	0.5	50	50	ENSMUST00000149917.2	ENSMUSG00000025165.13	Sectm1a	chr11	protein_coding	secreted and transmembrane 1A
chr11	121109564	121111690	+	121109564;121110749	121110667;121111690	ES	0.5	50	50	ENSMUST00000038831.15	ENSMUSG00000039307.17	Hexdc	chr11	protein_coding	hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing
chr11	121104896;121105750	121105586;121107719	+	121104896;121106161	121105997;121107719	MXE	0.5	100	100	ENSMUST00000038831.15	ENSMUSG00000039307.17	Hexdc	chr11	protein_coding	hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing
chr11	121104896;121105750	121105586;121108914	+	121104896;121107902	121105997;121108914	MXE	0.5	100	100	ENSMUST00000038831.15	ENSMUSG00000039307.17	Hexdc	chr11	protein_coding	hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing
chr11	121110749	121111909	+	121110749	121111690	A3SS	0.5	50	50	ENSMUST00000038831.15	ENSMUSG00000039307.17	Hexdc	chr11	protein_coding	hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing
chr11	121095805	121098465	+	121095668	121098465	A5SS	0.25	50	50	ENSMUST00000038831.15	ENSMUSG00000039307.17	Hexdc	chr11	protein_coding	hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing
chr11	121097574	121098465	+	121095668	121098465	A5SS	0.25	50	50	ENSMUST00000038831.15	ENSMUSG00000039307.17	Hexdc	chr11	protein_coding	hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing
chr11	121097600	121098465	+	121095668	121098465	A5SS	0.25	50	50	ENSMUST00000038831.15	ENSMUSG00000039307.17	Hexdc	chr11	protein_coding	hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing
chr11	121105750	121108914	+	121105750;121107902	121107719;121108914	ES	0.5	50	50	ENSMUST00000106117.8	ENSMUSG00000039307.17	Hexdc	chr11	protein_coding	hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing
chr11	121109564	121111690	+	121109564	121110667	A3SS&ES	0.5	50	50	ENSMUST00000106117.8	ENSMUSG00000039307.17	Hexdc	chr11	protein_coding	hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing
chr11	121104896	121105997	+	121104896	121105586	A3SS&ES	0.5	50	50	ENSMUST00000124925.8	ENSMUSG00000039307.17	Hexdc	chr11	protein_coding	hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing
chr11	121095805	121098465	+	121097574	121098465	A5SS	0.25	50	50	ENSMUST00000124925.8	ENSMUSG00000039307.17	Hexdc	chr11	protein_coding	hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing
chr11	121097600	121098465	+	121097574	121098465	A5SS	0.25	50	50	ENSMUST00000124925.8	ENSMUSG00000039307.17	Hexdc	chr11	protein_coding	hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing
chr11	121097600	121098465	+	121095805	121098465	A5SS	0.25	50	50	ENSMUST00000131009.2	ENSMUSG00000039307.17	Hexdc	chr11	protein_coding	hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing
chr11	121116726	121118069	-	121116726;121117668	121117595;121118069	ES	0.5	50	50	ENSMUST00000106115.8	ENSMUSG00000039294.15	Cybc1	chr11	protein_coding	cytochrome b 245 chaperone 1
chr11	121118110;121118859	121118715;121119154	-	121118110	121119154	cassetteExon	0.5	100	100	ENSMUST00000106115.8	ENSMUSG00000039294.15	Cybc1	chr11	protein_coding	cytochrome b 245 chaperone 1
chr11	121119296	121119593	-	121119296	121120039	A5SS	0.25	50	50	ENSMUST00000106115.8	ENSMUSG00000039294.15	Cybc1	chr11	protein_coding	cytochrome b 245 chaperone 1
chr11	121119296	121119865	-	121119296	121120039	A5SS	0.25	50	50	ENSMUST00000106115.8	ENSMUSG00000039294.15	Cybc1	chr11	protein_coding	cytochrome b 245 chaperone 1
chr11	121119296	121119885	-	121119296	121120039	A5SS	0.25	50	50	ENSMUST00000106115.8	ENSMUSG00000039294.15	Cybc1	chr11	protein_coding	cytochrome b 245 chaperone 1
chr11	121119296	121119593	-	121119296	121119865	A5SS	0.25	50	50	ENSMUST00000038709.14	ENSMUSG00000039294.15	Cybc1	chr11	protein_coding	cytochrome b 245 chaperone 1
chr11	121119296	121119885	-	121119296	121119865	A5SS	0.25	50	50	ENSMUST00000038709.14	ENSMUSG00000039294.15	Cybc1	chr11	protein_coding	cytochrome b 245 chaperone 1
chr11	121119296	121119885	-	121119296	121119593	5pMXE	0.25	50	50	ENSMUST00000133535.9	ENSMUSG00000039294.15	Cybc1	chr11	protein_coding	cytochrome b 245 chaperone 1
chr11	121116726	121118069	-	121117668	121118069	3pMXE	0.5	50	50	ENSMUST00000156214.3	ENSMUSG00000039294.15	Cybc1	chr11	protein_coding	cytochrome b 245 chaperone 1
chr11	121187177	121187740	+	121187048	121187740	A5SS	0.5	50	50	ENSMUST00000106113.2	ENSMUSG00000039275.10	Foxk2	chr11	protein_coding	forkhead box K2
chr11	121181716	121186855	+	121181716	121187049	A3SS	0.5	50	50	ENSMUST00000153579.2	ENSMUSG00000039275.10	Foxk2	chr11	protein_coding	forkhead box K2
chr11	121229470	121240058	-	121229470;121232041	121231940;121240058	ES	0.5	50	50	ENSMUST00000026173.13	ENSMUSG00000025173.14	Wdr45b	chr11	protein_coding	WD repeat domain 45B
chr11	121221954	121226210	-	121221058	121226210	A3SS	0.5	50	50	ENSMUST00000026173.13	ENSMUSG00000025173.14	Wdr45b	chr11	protein_coding	WD repeat domain 45B
chr11	121226326	121227802	-	121226400	121227802	A3SS	0.5	50	50	ENSMUST00000026173.13	ENSMUSG00000025173.14	Wdr45b	chr11	protein_coding	WD repeat domain 45B
chr11	121229470	121240058	-	121229470	121231940	5pMXE	0.5	50	50	ENSMUST00000137230.2	ENSMUSG00000025173.14	Wdr45b	chr11	protein_coding	WD repeat domain 45B
chr11	121254473	121278824	-	121254390	121278824	A3SS	0.5	50	50	ENSMUST00000106107.3	ENSMUSG00000025170.14	Rab40b	chr11	protein_coding	Rab40B, member RAS oncogene family
chr11	121254390	121278760	-	121254390	121278824	A5SS	0.33	50	50	ENSMUST00000106107.3	ENSMUSG00000025170.14	Rab40b	chr11	protein_coding	Rab40B, member RAS oncogene family
chr11	121254390	121278780	-	121254390	121278824	A5SS	0.33	50	50	ENSMUST00000106107.3	ENSMUSG00000025170.14	Rab40b	chr11	protein_coding	Rab40B, member RAS oncogene family
chr11	121254390	121278780	-	121254390	121278760	A5SS	0.33	50	50	ENSMUST00000149948.8	ENSMUSG00000025170.14	Rab40b	chr11	protein_coding	Rab40B, member RAS oncogene family
chr11	121330979	121332495	+	121330979	121339708	A3SS	0.5	50	50	ENSMUST00000026175.9	ENSMUSG00000025175.13	Fn3k	chr11	protein_coding	fructosamine 3 kinase
chr11	121394613;121409167	121408937;121431678	+	121394613	121431678	cassetteExon	0.5	100	100	ENSMUST00000103013.10	ENSMUSG00000039230.15	Tbcd	chr11	protein_coding	tubulin-specific chaperone d
chr11	121379278	121383384	+	121366497	121383384	A5SS	0.5	50	50	ENSMUST00000103013.10	ENSMUSG00000039230.15	Tbcd	chr11	protein_coding	tubulin-specific chaperone d
chr11	121435099	121441050	+	121431834	121441050	A5SS	0.5	50	50	ENSMUST00000103013.10	ENSMUSG00000039230.15	Tbcd	chr11	protein_coding	tubulin-specific chaperone d
chr11	121492545	121492783	+	121488218	121492783	A5SS	0.33	50	50	ENSMUST00000103013.10	ENSMUSG00000039230.15	Tbcd	chr11	protein_coding	tubulin-specific chaperone d
chr11	121492663	121492783	+	121488218	121492783	A5SS	0.33	50	50	ENSMUST00000103013.10	ENSMUSG00000039230.15	Tbcd	chr11	protein_coding	tubulin-specific chaperone d
chr11	121492663	121492783	+	121492545	121492783	A5SS	0.33	50	50	ENSMUST00000139414.8	ENSMUSG00000039230.15	Tbcd	chr11	protein_coding	tubulin-specific chaperone d
chr11	121518747	121520699	-	121515053	121520699	A3SS	0.5	50	50	ENSMUST00000067399.14	ENSMUSG00000046605.15	B3gntl1	chr11	protein_coding	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1
chr11	121593621	121598556	+	121592474	121598556	A5SS	0.33	50	50	ENSMUST00000106089.8	ENSMUSG00000039208.16	Metrnl	chr11	protein_coding	meteorin, glial cell differentiation regulator-like
chr11	121593701	121598556	+	121592474	121598556	A5SS	0.33	50	50	ENSMUST00000106089.8	ENSMUSG00000039208.16	Metrnl	chr11	protein_coding	meteorin, glial cell differentiation regulator-like
chr11	121593701	121598556	+	121593621	121598556	A5SS	0.33	50	50	ENSMUST00000036742.14	ENSMUSG00000039208.16	Metrnl	chr11	protein_coding	meteorin, glial cell differentiation regulator-like
chr12	3287660	3288064	+	3287660	3288029	A3SS	0.5	50	50	ENSMUST00000178074.8	ENSMUSG00000079179.10	Rab10os	chr12	lncRNA	RAB10, member RAS oncogene family, opposite strand
chr12	3286701	3287285	+	3285929	3287285	A5SS	0.5	50	50	ENSMUST00000178074.8	ENSMUSG00000079179.10	Rab10os	chr12	lncRNA	RAB10, member RAS oncogene family, opposite strand
chr12	3288112	3291522	+	3288112;3289009	3288834;3291522	ES	0.5	50	50	ENSMUST00000177896.8	ENSMUSG00000079179.10	Rab10os	chr12	lncRNA	RAB10, member RAS oncogene family, opposite strand
chr12	3297438	3299739	+	3297438	3299867	A3SS	0.5	50	50	ENSMUST00000177896.8	ENSMUSG00000079179.10	Rab10os	chr12	lncRNA	RAB10, member RAS oncogene family, opposite strand
chr12	3288112	3291522	+	3288112	3288834	3pMXE	0.5	50	50	ENSMUST00000179908.8	ENSMUSG00000079179.10	Rab10os	chr12	lncRNA	RAB10, member RAS oncogene family, opposite strand
chr12	3437454	3437552	+	3417531	3437552	A5SS	0.5	50	50	ENSMUST00000220210.2	ENSMUSG00000020668.11	Kif3c	chr12	protein_coding	kinesin family member 3C
chr12	3450197	3451683	+	3440554	3451683	A5SS	0.5	50	50	ENSMUST00000220210.2	ENSMUSG00000020668.11	Kif3c	chr12	protein_coding	kinesin family member 3C
chr12	3457924;3473184	3473100;3476501	-	3457924	3476501	cassetteExon	0.5	100	100	ENSMUST00000168012.3	ENSMUSG00000071456.7	1110002L01Rik	chr12	lncRNA	RIKEN cDNA 1110002L01 gene
chr12	3456711	3457644	-	3456711	3457701	A5SS	0.5	50	50	ENSMUST00000168012.3	ENSMUSG00000071456.7	1110002L01Rik	chr12	lncRNA	RIKEN cDNA 1110002L01 gene
chr12	3492556;3495454	3495452;3501662	+	3492556;3500253	3500251;3501662	MXE	0.5	100	100	ENSMUST00000111215.10	ENSMUSG00000037486.19	Asxl2	chr12	protein_coding	ASXL transcriptional regulator 2
chr12	3501770;3505640	3505547;3507062	+	3501770	3507062	cassetteExon	0.5	100	100	ENSMUST00000111215.10	ENSMUSG00000037486.19	Asxl2	chr12	protein_coding	ASXL transcriptional regulator 2
chr12	3524613;3526169	3526026;3534445	+	3524613	3534445	cassetteExon	0.5	100	100	ENSMUST00000111215.10	ENSMUSG00000037486.19	Asxl2	chr12	protein_coding	ASXL transcriptional regulator 2
chr12	3524613	3534445	+	3526169	3534445	5pMXE	0.5	50	50	ENSMUST00000219208.2	ENSMUSG00000037486.19	Asxl2	chr12	protein_coding	ASXL transcriptional regulator 2
chr12	3639238	3646649	+	3639238;3641986	3641906;3646649	ES	0.5	50	50	ENSMUST00000173199.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3646862	3682810	+	3646862;3667691	3667606;3682810	ES	0.5	50	50	ENSMUST00000173199.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3667691	3693917	+	3667691;3682964	3682810;3693917	ES	0.25	50	50	ENSMUST00000173199.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3698389	3768412	+	3698389;3736862	3736738;3768412	ES	0.5	50	50	ENSMUST00000173199.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3768489	3784939	+	3768489;3782707	3782618;3784939	ES	0.5	50	50	ENSMUST00000173199.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3801907	3822587	+	3801907;3804116	3804096;3822587	ES	0.5	50	50	ENSMUST00000173199.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3822746	3829619	+	3822746;3823640	3823551;3829619	ES	0.25	50	50	ENSMUST00000173199.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3823640	3831106	+	3823640;3829654	3829619;3831106	ES	0.33	50	50	ENSMUST00000173199.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3822746;3826109	3826059;3829619	+	3822746;3823640	3823551;3829619	MXE	0.5	100	100	ENSMUST00000173199.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3822746;3826109	3826059;3831106	+	3822746;3829654	3823551;3831106	MXE	0.5	100	100	ENSMUST00000173199.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3823640;3824610	3824570;3829619	+	3823640	3829619	cassetteExon	0.5	100	100	ENSMUST00000173199.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3823640;3826109	3826059;3829619	+	3823640	3829619	cassetteExon	0.5	100	100	ENSMUST00000173199.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3823640;3826109	3826059;3831106	+	3823640;3829654	3829619;3831106	MXE	0.5	100	100	ENSMUST00000173199.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3698389	3712673	+	3698389	3736738	A3SS	0.33	50	50	ENSMUST00000173199.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3623232	3639171	+	3622647	3639171	A5SS	0.5	50	50	ENSMUST00000173199.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3769658	3782618	+	3768489	3782618	A5SS	0.5	50	50	ENSMUST00000173199.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3822746;3826109	3826059;3831106	+	3822746;3823640	3823551;3831106	MXE	0.5	100	100	ENSMUST00000164578.9	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3822746;3829654	3829619;3831106	+	3822746;3823640	3823551;3831106	MXE	0.5	100	100	ENSMUST00000164578.9	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3823640;3826109	3826059;3831106	+	3823640	3831106	cassetteExon	0.5	100	100	ENSMUST00000164578.9	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3823640	3824570	+	3823640	3831106	A3SS	0.25	50	50	ENSMUST00000164578.9	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3639238;3646862	3646649;3693917	+	3639238;3641986	3641906;3693917	MXE	0.5	100	100	ENSMUST00000173483.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3641986;3646862	3646649;3693917	+	3641986	3693917	cassetteExon	0.5	100	100	ENSMUST00000173483.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3667691	3693917	+	3641986	3693917	A5SS	0.25	50	50	ENSMUST00000173483.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3682964	3693917	+	3641986	3693917	A5SS	0.25	50	50	ENSMUST00000173483.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3822746;3826109	3826059;3829619	+	3822746;3824610	3823551;3829619	MXE	0.5	100	100	ENSMUST00000164607.9	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3823640;3826109	3826059;3829619	+	3823640;3824610	3824570;3829619	MXE	0.5	100	100	ENSMUST00000164607.9	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3823640;3826109	3826059;3831106	+	3823640;3829654	3824570;3831106	MXE	0.5	100	100	ENSMUST00000164607.9	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3698389	3712673	+	3698389	3768412	A3SS	0.33	50	50	ENSMUST00000168806.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3822746	3829619	+	3822746;3826109	3826059;3829619	ES	0.25	50	50	ENSMUST00000173240.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3826109	3831106	+	3826109;3829654	3829619;3831106	ES	0.33	50	50	ENSMUST00000173240.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3822746;3823640	3823551;3826059	+	3822746	3826059	cassetteExon	0.5	100	100	ENSMUST00000173240.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3822746;3823640	3823551;3831106	+	3822746;3829654	3826059;3831106	MXE	0.5	100	100	ENSMUST00000173240.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3824610	3829619	+	3826109	3829619	A5SS&ES	0.25	50	50	ENSMUST00000173240.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3646862;3667691	3667606;3693917	+	3646862	3693917	cassetteExon	0.5	100	100	ENSMUST00000174639.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3646862;3682964	3682810;3693917	+	3646862	3693917	cassetteExon	0.5	100	100	ENSMUST00000174639.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3646862;3682964	3682810;3693917	+	3646862;3667691	3667606;3693917	MXE	0.5	100	100	ENSMUST00000174290.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3646862	3693917	+	3682964	3693917	5pMXE	0.25	50	50	ENSMUST00000172598.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3667691	3693917	+	3682964	3693917	5pMXE	0.25	50	50	ENSMUST00000172598.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3822746;3829654	3829619;3831106	+	3822746;3826109	3823551;3831106	MXE	0.5	100	100	ENSMUST00000172598.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3823640	3824570	+	3823640	3826059	A3SS	0.25	50	50	ENSMUST00000172598.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3698389	3768412	+	3736862	3768412	5pMXE	0.5	50	50	ENSMUST00000173074.2	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3822746;3826109	3826059;3831106	+	3822746;3829654	3829619;3831106	MXE	0.5	100	100	ENSMUST00000173542.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3824610	3829619	+	3822746	3829619	A5SS	0.25	50	50	ENSMUST00000173542.8	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3823640	3829619	+	3824610	3829619	5pMXE	0.25	50	50	ENSMUST00000174414.2	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3826109	3831106	+	3829654	3831106	A5SS&ES	0.5	50	50	ENSMUST00000174414.2	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3823640	3831106	+	3829654	3831106	5pMXE	0.33	50	50	ENSMUST00000174293.2	ENSMUSG00000071454.14	Dtnb	chr12	protein_coding	dystrobrevin, beta
chr12	3856602	3885027	+	3856232	3885027	A5SS	0.25	50	50	ENSMUST00000173700.2	ENSMUSG00000020661.16	Dnmt3a	chr12	protein_coding	DNA methyltransferase 3A
chr12	3857120	3885027	+	3856232	3885027	A5SS	0.25	50	50	ENSMUST00000173700.2	ENSMUSG00000020661.16	Dnmt3a	chr12	protein_coding	DNA methyltransferase 3A
chr12	3857254	3885027	+	3856232	3885027	A5SS	0.25	50	50	ENSMUST00000173700.2	ENSMUSG00000020661.16	Dnmt3a	chr12	protein_coding	DNA methyltransferase 3A
chr12	3857120	3885027	+	3856602	3885027	A5SS	0.25	50	50	ENSMUST00000085826.13	ENSMUSG00000020661.16	Dnmt3a	chr12	protein_coding	DNA methyltransferase 3A
chr12	3857120	3915985	+	3899739	3915985	A5SS&ES	0.33	50	50	ENSMUST00000085826.13	ENSMUSG00000020661.16	Dnmt3a	chr12	protein_coding	DNA methyltransferase 3A
chr12	3857254	3885027	+	3856602	3885027	A5SS	0.25	50	50	ENSMUST00000085826.13	ENSMUSG00000020661.16	Dnmt3a	chr12	protein_coding	DNA methyltransferase 3A
chr12	3912099	3915985	+	3899739	3915985	A5SS	0.33	50	50	ENSMUST00000085826.13	ENSMUSG00000020661.16	Dnmt3a	chr12	protein_coding	DNA methyltransferase 3A
chr12	3946148	3946886	+	3946148;3946685	3946578;3946886	ES	0.5	50	50	ENSMUST00000020991.15	ENSMUSG00000020661.16	Dnmt3a	chr12	protein_coding	DNA methyltransferase 3A
chr12	3952471	3954140	+	3952471;3952814	3952666;3954140	ES	0.5	50	50	ENSMUST00000020991.15	ENSMUSG00000020661.16	Dnmt3a	chr12	protein_coding	DNA methyltransferase 3A
chr12	3923428	3925662	+	3923428	3945543	A3SS	0.5	50	50	ENSMUST00000020991.15	ENSMUSG00000020661.16	Dnmt3a	chr12	protein_coding	DNA methyltransferase 3A
chr12	3857254	3885027	+	3857120	3885027	A5SS	0.25	50	50	ENSMUST00000020991.15	ENSMUSG00000020661.16	Dnmt3a	chr12	protein_coding	DNA methyltransferase 3A
chr12	3935655	3945543	+	3923428	3945543	A5SS	0.16	50	50	ENSMUST00000020991.15	ENSMUSG00000020661.16	Dnmt3a	chr12	protein_coding	DNA methyltransferase 3A
chr12	3941860	3945543	+	3923428	3945543	A5SS	0.16	50	50	ENSMUST00000020991.15	ENSMUSG00000020661.16	Dnmt3a	chr12	protein_coding	DNA methyltransferase 3A
chr12	3945108	3945543	+	3923428	3945543	A5SS	0.16	50	50	ENSMUST00000020991.15	ENSMUSG00000020661.16	Dnmt3a	chr12	protein_coding	DNA methyltransferase 3A
chr12	3945421	3945543	+	3923428	3945543	A5SS	0.16	50	50	ENSMUST00000020991.15	ENSMUSG00000020661.16	Dnmt3a	chr12	protein_coding	DNA methyltransferase 3A
chr12	3857120	3885027	+	3857120	3915985	A3SS	0.5	50	50	ENSMUST00000172509.8	ENSMUSG00000020661.16	Dnmt3a	chr12	protein_coding	DNA methyltransferase 3A
chr12	3912099	3915985	+	3857120	3915985	A5SS	0.33	50	50	ENSMUST00000172509.8	ENSMUSG00000020661.16	Dnmt3a	chr12	protein_coding	DNA methyltransferase 3A
chr12	3916252	3922835	+	3916252	3945543	A3SS	0.5	50	50	ENSMUST00000174483.8	ENSMUSG00000020661.16	Dnmt3a	chr12	protein_coding	DNA methyltransferase 3A
chr12	3923428	3945543	+	3916252	3945543	A5SS	0.16	50	50	ENSMUST00000174483.8	ENSMUSG00000020661.16	Dnmt3a	chr12	protein_coding	DNA methyltransferase 3A
chr12	3935655	3945543	+	3916252	3945543	A5SS	0.16	50	50	ENSMUST00000174483.8	ENSMUSG00000020661.16	Dnmt3a	chr12	protein_coding	DNA methyltransferase 3A
chr12	3941860	3945543	+	3916252	3945543	A5SS	0.16	50	50	ENSMUST00000174483.8	ENSMUSG00000020661.16	Dnmt3a	chr12	protein_coding	DNA methyltransferase 3A
chr12	3945108	3945543	+	3916252	3945543	A5SS	0.16	50	50	ENSMUST00000174483.8	ENSMUSG00000020661.16	Dnmt3a	chr12	protein_coding	DNA methyltransferase 3A
chr12	3945421	3945543	+	3916252	3945543	A5SS	0.16	50	50	ENSMUST00000174483.8	ENSMUSG00000020661.16	Dnmt3a	chr12	protein_coding	DNA methyltransferase 3A
chr12	3941860	3945543	+	3935655	3945543	A5SS	0.16	50	50	ENSMUST00000174102.2	ENSMUSG00000020661.16	Dnmt3a	chr12	protein_coding	DNA methyltransferase 3A
chr12	3945108	3945543	+	3935655	3945543	A5SS	0.16	50	50	ENSMUST00000174102.2	ENSMUSG00000020661.16	Dnmt3a	chr12	protein_coding	DNA methyltransferase 3A
chr12	3945421	3945543	+	3935655	3945543	A5SS	0.16	50	50	ENSMUST00000174102.2	ENSMUSG00000020661.16	Dnmt3a	chr12	protein_coding	DNA methyltransferase 3A
chr12	3945108	3945543	+	3941860	3945543	A5SS	0.16	50	50	ENSMUST00000172689.8	ENSMUSG00000020661.16	Dnmt3a	chr12	protein_coding	DNA methyltransferase 3A
chr12	3945421	3945543	+	3941860	3945543	A5SS	0.16	50	50	ENSMUST00000172689.8	ENSMUSG00000020661.16	Dnmt3a	chr12	protein_coding	DNA methyltransferase 3A
chr12	3945108	3945543	+	3945421	3945543	A5SS	0.16	50	50	ENSMUST00000172879.2	ENSMUSG00000020661.16	Dnmt3a	chr12	protein_coding	DNA methyltransferase 3A
chr12	4005046	4008106	+	4005046;4006929	4006819;4008106	ES	0.5	50	50	ENSMUST00000219543.2	ENSMUSG00000020660.7	Pomc	chr12	protein_coding	pro-opiomelanocortin-alpha
chr12	4005046	4005388	+	4005046	4006819	A3SS	0.25	50	50	ENSMUST00000219543.2	ENSMUSG00000020660.7	Pomc	chr12	protein_coding	pro-opiomelanocortin-alpha
chr12	4005046	4008076	+	4005046	4006819	A3SS&ES	0.25	50	50	ENSMUST00000219543.2	ENSMUSG00000020660.7	Pomc	chr12	protein_coding	pro-opiomelanocortin-alpha
chr12	4006929	4008076	+	4006929	4008106	A3SS	0.5	50	50	ENSMUST00000219543.2	ENSMUSG00000020660.7	Pomc	chr12	protein_coding	pro-opiomelanocortin-alpha
chr12	4005046	4005388	+	4005046	4008106	A3SS	0.25	50	50	ENSMUST00000218089.2	ENSMUSG00000020660.7	Pomc	chr12	protein_coding	pro-opiomelanocortin-alpha
chr12	4005046	4008076	+	4005046	4008106	A3SS	0.25	50	50	ENSMUST00000218089.2	ENSMUSG00000020660.7	Pomc	chr12	protein_coding	pro-opiomelanocortin-alpha
chr12	4005046;4005563	4005388;4008076	+	4005046	4008076	cassetteExon	0.5	100	100	ENSMUST00000020990.7	ENSMUSG00000020660.7	Pomc	chr12	protein_coding	pro-opiomelanocortin-alpha
chr12	4005046;4006929	4006819;4008076	+	4005046	4008076	cassetteExon	0.5	100	100	ENSMUST00000020990.7	ENSMUSG00000020660.7	Pomc	chr12	protein_coding	pro-opiomelanocortin-alpha
chr12	4005046;4005563	4005388;4008076	+	4005046;4006929	4006819;4008076	MXE	0.5	100	100	ENSMUST00000218169.2	ENSMUSG00000020660.7	Pomc	chr12	protein_coding	pro-opiomelanocortin-alpha
chr12	4005046	4008106	+	4005046	4006819	A3SS&ES	0.25	50	50	ENSMUST00000218169.2	ENSMUSG00000020660.7	Pomc	chr12	protein_coding	pro-opiomelanocortin-alpha
chr12	4023675	4026715	-	4023675;4025467	4025336;4026715	ES	0.5	50	50	ENSMUST00000111178.2	ENSMUSG00000020658.11	Efr3b	chr12	protein_coding	EFR3 homolog B
chr12	4021893;4022995	4022824;4023608	-	4021893	4023608	cassetteExon	0.5	100	100	ENSMUST00000111178.2	ENSMUSG00000020658.11	Efr3b	chr12	protein_coding	EFR3 homolog B
chr12	4032105	4032352	-	4032105	4032855	A5SS	0.5	50	50	ENSMUST00000111178.2	ENSMUSG00000020658.11	Efr3b	chr12	protein_coding	EFR3 homolog B
chr12	4023675	4026715	-	4023675	4025336	5pMXE	0.5	50	50	ENSMUST00000219331.2	ENSMUSG00000020658.11	Efr3b	chr12	protein_coding	EFR3 homolog B
chr12	4138971	4139134	+	4136036	4139134	A5SS	0.5	50	50	ENSMUST00000020986.15	ENSMUSG00000020657.17	Dnajc27	chr12	protein_coding	DnaJ heat shock protein family (Hsp40) member C27
chr12	4183778	4184153	+	4183778	4184147	A3SS	0.5	50	50	ENSMUST00000152792.8	ENSMUSG00000020654.16	Adcy3	chr12	protein_coding	adenylate cyclase 3
chr12	4223604	4232811	+	4223604	4244317	A3SS	0.5	50	50	ENSMUST00000152792.8	ENSMUSG00000020654.16	Adcy3	chr12	protein_coding	adenylate cyclase 3
chr12	4256978	4258580	+	4256978	4258577	A3SS	0.5	50	50	ENSMUST00000152792.8	ENSMUSG00000020654.16	Adcy3	chr12	protein_coding	adenylate cyclase 3
chr12	4183719	4184147	+	4183778	4184147	A5SS	0.5	50	50	ENSMUST00000152792.8	ENSMUSG00000020654.16	Adcy3	chr12	protein_coding	adenylate cyclase 3
chr12	4209798	4223455	+	4185000	4223455	A5SS	0.5	50	50	ENSMUST00000152792.8	ENSMUSG00000020654.16	Adcy3	chr12	protein_coding	adenylate cyclase 3
chr12	4183719	4184147	+	4183719	4184153	A3SS	0.5	50	50	ENSMUST00000124505.8	ENSMUSG00000020654.16	Adcy3	chr12	protein_coding	adenylate cyclase 3
chr12	4183778	4184153	+	4183719	4184153	A5SS	0.5	50	50	ENSMUST00000124505.8	ENSMUSG00000020654.16	Adcy3	chr12	protein_coding	adenylate cyclase 3
chr12	4265430	4266519	-	4248488	4266519	A3SS	0.5	50	50	ENSMUST00000146261.2	ENSMUSG00000020652.18	Cenpo	chr12	protein_coding	centromere protein O
chr12	4267322	4283531	-	4267322;4281682	4281516;4283531	ES	0.5	50	50	ENSMUST00000111169.10	ENSMUSG00000020652.18	Cenpo	chr12	protein_coding	centromere protein O
chr12	4281682	4281947	-	4281682	4283531	A5SS	0.5	50	50	ENSMUST00000111169.10	ENSMUSG00000020652.18	Cenpo	chr12	protein_coding	centromere protein O
chr12	4299750	4303657	-	4299750;4299890	4299836;4303657	ES	0.5	50	50	ENSMUST00000085814.5	ENSMUSG00000020647.11	Ncoa1	chr12	protein_coding	nuclear receptor coactivator 1
chr12	4346248	4356424	-	4346248;4347623	4347476;4356424	ES	0.5	50	50	ENSMUST00000085814.5	ENSMUSG00000020647.11	Ncoa1	chr12	protein_coding	nuclear receptor coactivator 1
chr12	4404509;4422657	4422475;4466671	-	4404509	4466671	cassetteExon	0.5	100	100	ENSMUST00000085814.5	ENSMUSG00000020647.11	Ncoa1	chr12	protein_coding	nuclear receptor coactivator 1
chr12	4404509;4458655	4458580;4466671	-	4404509	4466671	cassetteExon	0.5	100	100	ENSMUST00000085814.5	ENSMUSG00000020647.11	Ncoa1	chr12	protein_coding	nuclear receptor coactivator 1
chr12	4299747	4299836	-	4299750	4299836	A3SS	0.5	50	50	ENSMUST00000085814.5	ENSMUSG00000020647.11	Ncoa1	chr12	protein_coding	nuclear receptor coactivator 1
chr12	4309309	4313434	-	4309395	4313434	A3SS	0.5	50	50	ENSMUST00000085814.5	ENSMUSG00000020647.11	Ncoa1	chr12	protein_coding	nuclear receptor coactivator 1
chr12	4299750	4303657	-	4299890	4303657	A3SS&ES	0.5	50	50	ENSMUST00000219373.2	ENSMUSG00000020647.11	Ncoa1	chr12	protein_coding	nuclear receptor coactivator 1
chr12	4404509;4458655	4458580;4466671	-	4404509;4422657	4422475;4466671	MXE	0.5	100	100	ENSMUST00000217794.2	ENSMUSG00000020647.11	Ncoa1	chr12	protein_coding	nuclear receptor coactivator 1
chr12	4394502	4404361	-	4373045	4404361	A3SS	0.5	50	50	ENSMUST00000217674.2	ENSMUSG00000020647.11	Ncoa1	chr12	protein_coding	nuclear receptor coactivator 1
chr12	4373045	4385781	-	4373045	4404361	A5SS	0.5	50	50	ENSMUST00000217674.2	ENSMUSG00000020647.11	Ncoa1	chr12	protein_coding	nuclear receptor coactivator 1
chr12	4603175	4603927	-	4603175	4603691	5pMXE	0.5	50	50	ENSMUST00000217932.2	ENSMUSG00000112819.2	Gm46332	chr12	lncRNA	predicted gene, 46332
chr12	4643232	4663243	+	4642931	4663243	A5SS	0.5	50	50	ENSMUST00000218402.2	ENSMUSG00000020640.11	Itsn2	chr12	protein_coding	intersectin 2
chr12	4689794	4699983	+	4689794	4690913	3pMXE	0.5	50	50	ENSMUST00000217981.2	ENSMUSG00000020640.11	Itsn2	chr12	protein_coding	intersectin 2
chr12	4689794;4690993	4690913;4699983	+	4689794	4699983	cassetteExon	0.5	100	100	ENSMUST00000062580.8	ENSMUSG00000020640.11	Itsn2	chr12	protein_coding	intersectin 2
chr12	4747263;4747494	4747431;4750320	+	4747263	4750320	cassetteExon	0.5	100	100	ENSMUST00000062580.8	ENSMUSG00000020640.11	Itsn2	chr12	protein_coding	intersectin 2
chr12	4703543	4707698	+	4703543	4708015	A3SS	0.5	50	50	ENSMUST00000062580.8	ENSMUSG00000020640.11	Itsn2	chr12	protein_coding	intersectin 2
chr12	4723607	4726211	+	4723607	4747142	A3SS	0.5	50	50	ENSMUST00000062580.8	ENSMUSG00000020640.11	Itsn2	chr12	protein_coding	intersectin 2
chr12	4746516	4747142	+	4723607	4747142	A5SS	0.5	50	50	ENSMUST00000062580.8	ENSMUSG00000020640.11	Itsn2	chr12	protein_coding	intersectin 2
chr12	4692260	4705794	-	4647315	4705794	A3SS	0.5	50	50	ENSMUST00000217882.2	ENSMUSG00000111971.2	Gm48678	chr12	lncRNA	predicted gene, 48678
chr12	4782890	4784968	-	4782929	4784968	A3SS	0.5	50	50	ENSMUST00000111154.4	ENSMUSG00000079177.5	Fam228a	chr12	protein_coding	family with sequence similarity 228, member A
chr12	4787785	4788301	-	4787785	4788209	A5SS	0.33	50	50	ENSMUST00000111154.4	ENSMUSG00000079177.5	Fam228a	chr12	protein_coding	family with sequence similarity 228, member A
chr12	4787785	4788386	-	4787785	4788209	A5SS	0.33	50	50	ENSMUST00000111154.4	ENSMUSG00000079177.5	Fam228a	chr12	protein_coding	family with sequence similarity 228, member A
chr12	4787785	4788386	-	4787785	4788301	5pMXE	0.33	50	50	ENSMUST00000222363.2	ENSMUSG00000079177.5	Fam228a	chr12	protein_coding	family with sequence similarity 228, member A
chr12	4790043	4818390	-	4790043	4812327	5pMXE	0.25	50	50	ENSMUST00000218905.2	ENSMUSG00000050545.11	Fam228b	chr12	protein_coding	family with sequence similarity 228, member B
chr12	4798351	4812327	-	4790043	4812327	A3SS	0.33	50	50	ENSMUST00000218905.2	ENSMUSG00000050545.11	Fam228b	chr12	protein_coding	family with sequence similarity 228, member B
chr12	4811987	4812327	-	4790043	4812327	A3SS	0.33	50	50	ENSMUST00000218905.2	ENSMUSG00000050545.11	Fam228b	chr12	protein_coding	family with sequence similarity 228, member B
chr12	4790043	4791062	-	4790043	4812327	A5SS	0.25	50	50	ENSMUST00000218905.2	ENSMUSG00000050545.11	Fam228b	chr12	protein_coding	family with sequence similarity 228, member B
chr12	4790043	4795652	-	4790043	4812327	A5SS	0.25	50	50	ENSMUST00000218905.2	ENSMUSG00000050545.11	Fam228b	chr12	protein_coding	family with sequence similarity 228, member B
chr12	4814147	4818390	-	4790043	4818390	A3SS	0.5	50	50	ENSMUST00000219898.2	ENSMUSG00000050545.11	Fam228b	chr12	protein_coding	family with sequence similarity 228, member B
chr12	4790043	4791062	-	4790043	4818390	A5SS	0.25	50	50	ENSMUST00000219898.2	ENSMUSG00000050545.11	Fam228b	chr12	protein_coding	family with sequence similarity 228, member B
chr12	4790043	4795652	-	4790043	4818390	A5SS	0.25	50	50	ENSMUST00000219898.2	ENSMUSG00000050545.11	Fam228b	chr12	protein_coding	family with sequence similarity 228, member B
chr12	4790043;4791207	4791062;4795652	-	4790043	4795652	cassetteExon	0.5	100	100	ENSMUST00000218422.2	ENSMUSG00000050545.11	Fam228b	chr12	protein_coding	family with sequence similarity 228, member B
chr12	4791207	4795652	-	4791207	4794470	5pMXE	0.5	50	50	ENSMUST00000217684.2	ENSMUSG00000050545.11	Fam228b	chr12	protein_coding	family with sequence similarity 228, member B
chr12	4790043	4795652	-	4791207	4795652	3pMXE	0.5	50	50	ENSMUST00000223500.2	ENSMUSG00000050545.11	Fam228b	chr12	protein_coding	family with sequence similarity 228, member B
chr12	4798196	4798264	-	4798177	4798264	A3SS	0.5	50	50	ENSMUST00000218856.2	ENSMUSG00000050545.11	Fam228b	chr12	protein_coding	family with sequence similarity 228, member B
chr12	4798351;4811987	4811859;4812327	-	4798351	4812327	cassetteExon	0.5	100	100	ENSMUST00000053458.7	ENSMUSG00000050545.11	Fam228b	chr12	protein_coding	family with sequence similarity 228, member B
chr12	4819568	4819982	+	4819219	4819982	A5SS	0.5	50	50	ENSMUST00000219438.2	ENSMUSG00000020639.15	Pfn4	chr12	protein_coding	profilin family, member 4
chr12	4867819	4868836	+	4867819	4870594	A3SS	0.5	50	50	ENSMUST00000046207.9	ENSMUSG00000037361.9	Sf3b6	chr12	protein_coding	splicing factor 3B, subunit 6
chr12	4876896	4877023	+	4876896	4877014	A3SS	0.5	50	50	ENSMUST00000046207.9	ENSMUSG00000037361.9	Sf3b6	chr12	protein_coding	splicing factor 3B, subunit 6
chr12	4883840	4884739	-	4883795	4884739	A3SS	0.5	50	50	ENSMUST00000020964.7	ENSMUSG00000020635.9	Fkbp1b	chr12	protein_coding	FK506 binding protein 1b
chr12	4905392	4907807	+	4905392	4906846	3pMXE	0.5	50	50	ENSMUST00000220215.2	ENSMUSG00000051721.7	Wdcp	chr12	protein_coding	WD repeat and coiled coil containing
chr12	4893451;4899113	4898863;4900127	+	4893451	4900127	cassetteExon	0.5	100	100	ENSMUST00000220215.2	ENSMUSG00000051721.7	Wdcp	chr12	protein_coding	WD repeat and coiled coil containing
chr12	4893451	4900127	+	4893451	4898863	3pMXE	0.5	50	50	ENSMUST00000219069.2	ENSMUSG00000051721.7	Wdcp	chr12	protein_coding	WD repeat and coiled coil containing
chr12	4921501;4923285	4923135;4924271	-	4921501	4924271	cassetteExon	0.5	100	100	ENSMUST00000150764.8	ENSMUSG00000037336.15	Mfsd2b	chr12	protein_coding	major facilitator superfamily domain containing 2B
chr12	4915313	4916449	-	4916268	4916449	A3SS	0.5	50	50	ENSMUST00000150764.8	ENSMUSG00000037336.15	Mfsd2b	chr12	protein_coding	major facilitator superfamily domain containing 2B
chr12	4919658	4920499	-	4917702	4920499	A3SS	0.33	50	50	ENSMUST00000150764.8	ENSMUSG00000037336.15	Mfsd2b	chr12	protein_coding	major facilitator superfamily domain containing 2B
chr12	4919672	4920499	-	4917702	4920499	A3SS	0.33	50	50	ENSMUST00000150764.8	ENSMUSG00000037336.15	Mfsd2b	chr12	protein_coding	major facilitator superfamily domain containing 2B
chr12	4917702	4918913	-	4917702	4920499	A5SS	0.5	50	50	ENSMUST00000150764.8	ENSMUSG00000037336.15	Mfsd2b	chr12	protein_coding	major facilitator superfamily domain containing 2B
chr12	4915313;4916268	4916159;4916449	-	4915313	4916449	cassetteExon	0.5	100	100	ENSMUST00000085790.12	ENSMUSG00000037336.15	Mfsd2b	chr12	protein_coding	major facilitator superfamily domain containing 2B
chr12	4919672	4920499	-	4919658	4920499	A3SS	0.33	50	50	ENSMUST00000085790.12	ENSMUSG00000037336.15	Mfsd2b	chr12	protein_coding	major facilitator superfamily domain containing 2B
chr12	4915313	4915728	-	4915313	4916449	A5SS	0.33	50	50	ENSMUST00000085790.12	ENSMUSG00000037336.15	Mfsd2b	chr12	protein_coding	major facilitator superfamily domain containing 2B
chr12	4915313;4915871	4915728;4916159	-	4915313	4916159	cassetteExon	0.5	100	100	ENSMUST00000125344.8	ENSMUSG00000037336.15	Mfsd2b	chr12	protein_coding	major facilitator superfamily domain containing 2B
chr12	4935858	4944538	-	4935858;4941421	4941315;4944538	ES	0.5	50	50	ENSMUST00000020962.12	ENSMUSG00000020634.13	Ubxn2a	chr12	protein_coding	UBX domain protein 2A
chr12	4952272	4957141	-	4952272	4957349	A5SS	0.5	50	50	ENSMUST00000020962.12	ENSMUSG00000020634.13	Ubxn2a	chr12	protein_coding	UBX domain protein 2A
chr12	4990245	4991972	+	4991766	4991972	A5SS	0.5	50	50	ENSMUST00000219187.2	ENSMUSG00000052812.6	Atad2b	chr12	protein_coding	ATPase family, AAA domain containing 2B
chr12	5041058;5050693	5050640;5056606	+	5041058	5056606	cassetteExon	0.5	100	100	ENSMUST00000045664.7	ENSMUSG00000052812.6	Atad2b	chr12	protein_coding	ATPase family, AAA domain containing 2B
chr12	5032198	5040872	+	5028588	5040872	A5SS	0.5	50	50	ENSMUST00000218859.2	ENSMUSG00000052812.6	Atad2b	chr12	protein_coding	ATPase family, AAA domain containing 2B
chr12	5140716	5141242	-	5140716;5141101	5140919;5141242	ES	0.5	50	50	ENSMUST00000020958.9	ENSMUSG00000020627.11	Klhl29	chr12	protein_coding	kelch-like 29
chr12	5462424	5464902	+	5426528	5464902	A5SS	0.5	50	50	ENSMUST00000037953.7	ENSMUSG00000037735.8	2810032G03Rik	chr12	lncRNA	RIKEN cDNA 2810032G03 gene
chr12	5858350	5863269	+	5858350	5904338	A3SS	0.5	50	50	ENSMUST00000219369.2	ENSMUSG00000112404.2	Gm32442	chr12	lncRNA	predicted gene, 32442
chr12	5904406	5905814	+	5904406	6034367	A3SS	0.5	50	50	ENSMUST00000219369.2	ENSMUSG00000112404.2	Gm32442	chr12	lncRNA	predicted gene, 32442
chr12	5864533	5904338	+	5858350	5904338	A5SS	0.5	50	50	ENSMUST00000219369.2	ENSMUSG00000112404.2	Gm32442	chr12	lncRNA	predicted gene, 32442
chr12	5935708	6034367	+	5904406	6034367	A5SS	0.33	50	50	ENSMUST00000219369.2	ENSMUSG00000112404.2	Gm32442	chr12	lncRNA	predicted gene, 32442
chr12	5987568	6034367	+	5904406	6034367	A5SS	0.33	50	50	ENSMUST00000219369.2	ENSMUSG00000112404.2	Gm32442	chr12	lncRNA	predicted gene, 32442
chr12	5864533	5904338	+	5864533	5897991	3pMXE	0.5	50	50	ENSMUST00000220232.2	ENSMUSG00000112404.2	Gm32442	chr12	lncRNA	predicted gene, 32442
chr12	5935708	5986931	+	5935708	6034367	A3SS	0.5	50	50	ENSMUST00000219102.2	ENSMUSG00000112404.2	Gm32442	chr12	lncRNA	predicted gene, 32442
chr12	5987568	6034367	+	5935708	6034367	A5SS	0.5	50	50	ENSMUST00000219102.2	ENSMUSG00000112404.2	Gm32442	chr12	lncRNA	predicted gene, 32442
chr12	7805971;7806212	7806071;7909565	-	7805971	7909565	cassetteExon	0.5	100	100	ENSMUST00000219198.2	ENSMUSG00000112323.2	Gm32828	chr12	lncRNA	predicted gene, 32828
chr12	8027860	8029253	+	8027860	8028213	A3SS&ES	0.5	50	50	ENSMUST00000171271.8	ENSMUSG00000020609.15	Apob	chr12	protein_coding	apolipoprotein B
chr12	8028251	8029253	+	8028251	8029256	A3SS	0.5	50	50	ENSMUST00000171271.8	ENSMUSG00000020609.15	Apob	chr12	protein_coding	apolipoprotein B
chr12	8027860	8029253	+	8027860;8028251	8028213;8029253	ES	0.5	50	50	ENSMUST00000037811.13	ENSMUSG00000020609.15	Apob	chr12	protein_coding	apolipoprotein B
chr12	8052256	8053316	+	8052256	8053256	A3SS	0.5	50	50	ENSMUST00000037811.13	ENSMUSG00000020609.15	Apob	chr12	protein_coding	apolipoprotein B
chr12	8258192	8277220	+	8258192;8270755	8270600;8277220	ES	0.5	50	50	ENSMUST00000037383.13	ENSMUSG00000037669.16	Ldah	chr12	protein_coding	lipid droplet associated hydrolase
chr12	8270755	8288443	+	8270755;8277363	8277220;8288443	ES	0.5	50	50	ENSMUST00000037383.13	ENSMUSG00000037669.16	Ldah	chr12	protein_coding	lipid droplet associated hydrolase
chr12	8277363	8318364	+	8277363;8288615	8288443;8318364	ES	0.33	50	50	ENSMUST00000037383.13	ENSMUSG00000037669.16	Ldah	chr12	protein_coding	lipid droplet associated hydrolase
chr12	8318598	8333900	+	8318598;8325890	8325808;8333900	ES	0.5	50	50	ENSMUST00000037383.13	ENSMUSG00000037669.16	Ldah	chr12	protein_coding	lipid droplet associated hydrolase
chr12	8325890	8331325	+	8325890	8333900	A3SS	0.5	50	50	ENSMUST00000037383.13	ENSMUSG00000037669.16	Ldah	chr12	protein_coding	lipid droplet associated hydrolase
chr12	8258204	8270600	+	8258192	8270600	A5SS	0.33	50	50	ENSMUST00000037383.13	ENSMUSG00000037669.16	Ldah	chr12	protein_coding	lipid droplet associated hydrolase
chr12	8258382	8270600	+	8258192	8270600	A5SS	0.33	50	50	ENSMUST00000037383.13	ENSMUSG00000037669.16	Ldah	chr12	protein_coding	lipid droplet associated hydrolase
chr12	8318598	8333900	+	8318598	8325808	3pMXE	0.5	50	50	ENSMUST00000218883.2	ENSMUSG00000037669.16	Ldah	chr12	protein_coding	lipid droplet associated hydrolase
chr12	8258192;8270755	8270600;8288443	+	8258192;8277363	8277220;8288443	MXE	0.5	100	100	ENSMUST00000218883.2	ENSMUSG00000037669.16	Ldah	chr12	protein_coding	lipid droplet associated hydrolase
chr12	8258192;8270755	8270600;8318364	+	8258192;8288615	8277220;8318364	MXE	0.5	100	100	ENSMUST00000218883.2	ENSMUSG00000037669.16	Ldah	chr12	protein_coding	lipid droplet associated hydrolase
chr12	8270755;8277363	8277220;8318364	+	8270755	8318364	cassetteExon	0.5	100	100	ENSMUST00000218305.2	ENSMUSG00000037669.16	Ldah	chr12	protein_coding	lipid droplet associated hydrolase
chr12	8270755;8288615	8288443;8318364	+	8270755	8318364	cassetteExon	0.5	100	100	ENSMUST00000218305.2	ENSMUSG00000037669.16	Ldah	chr12	protein_coding	lipid droplet associated hydrolase
chr12	8258382	8270600	+	8258204	8270600	A5SS	0.33	50	50	ENSMUST00000218305.2	ENSMUSG00000037669.16	Ldah	chr12	protein_coding	lipid droplet associated hydrolase
chr12	8270755;8288615	8288443;8318364	+	8270755;8277363	8277220;8318364	MXE	0.5	100	100	ENSMUST00000219043.2	ENSMUSG00000037669.16	Ldah	chr12	protein_coding	lipid droplet associated hydrolase
chr12	8258192	8277220	+	8270755	8277220	A5SS&ES	0.5	50	50	ENSMUST00000169104.3	ENSMUSG00000037669.16	Ldah	chr12	protein_coding	lipid droplet associated hydrolase
chr12	8258192;8277363	8277220;8318364	+	8258192;8270755	8270600;8318364	MXE	0.5	100	100	ENSMUST00000220345.2	ENSMUSG00000037669.16	Ldah	chr12	protein_coding	lipid droplet associated hydrolase
chr12	8270755	8288443	+	8270755	8277220	3pMXE	0.33	50	50	ENSMUST00000217763.2	ENSMUSG00000037669.16	Ldah	chr12	protein_coding	lipid droplet associated hydrolase
chr12	8270755	8318364	+	8270755	8277220	3pMXE	0.33	50	50	ENSMUST00000217763.2	ENSMUSG00000037669.16	Ldah	chr12	protein_coding	lipid droplet associated hydrolase
chr12	8277363	8318364	+	8277363	8288443	3pMXE	0.5	50	50	ENSMUST00000220274.2	ENSMUSG00000037669.16	Ldah	chr12	protein_coding	lipid droplet associated hydrolase
chr12	8348952	8351567	-	8348928	8351567	A3SS	0.5	50	50	ENSMUST00000220073.2	ENSMUSG00000037660.6	Gdf7	chr12	protein_coding	growth differentiation factor 7
chr12	8367950;8371726	8371519;8373870	+	8367950	8373870	cassetteExon	0.5	100	100	ENSMUST00000220199.2	ENSMUSG00000020605.10	Hs1bp3	chr12	protein_coding	HCLS1 binding protein 3
chr12	8367655	8367785	+	8363497	8367785	A5SS	0.5	50	50	ENSMUST00000220199.2	ENSMUSG00000020605.10	Hs1bp3	chr12	protein_coding	HCLS1 binding protein 3
chr12	8599684	8611840	+	8571232	8611840	A5SS	0.5	50	50	ENSMUST00000219595.2	ENSMUSG00000112276.2	5033421B08Rik	chr12	lncRNA	RIKEN cDNA 5033421B08 gene
chr12	8585814	8588787	-	8585814	8601903	A5SS	0.5	50	50	ENSMUST00000036938.9	ENSMUSG00000020600.14	Slc7a15	chr12	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 15
chr12	8588503	8588787	-	8585814	8588787	A3SS	0.5	50	50	ENSMUST00000095863.10	ENSMUSG00000020600.14	Slc7a15	chr12	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 15
chr12	8779149	8793761	+	8779149;8783509	8783273;8793761	ES	0.5	50	50	ENSMUST00000111123.9	ENSMUSG00000020594.15	Pum2	chr12	protein_coding	pumilio RNA-binding family member 2
chr12	8794466	8797157	+	8794466;8794743	8794615;8797157	ES	0.33	50	50	ENSMUST00000111123.9	ENSMUSG00000020594.15	Pum2	chr12	protein_coding	pumilio RNA-binding family member 2
chr12	8748159;8749188	8749064;8755933	+	8748159	8755933	cassetteExon	0.5	100	100	ENSMUST00000111123.9	ENSMUSG00000020594.15	Pum2	chr12	protein_coding	pumilio RNA-binding family member 2
chr12	8756041	8757251	+	8756041	8759322	A3SS	0.5	50	50	ENSMUST00000111123.9	ENSMUSG00000020594.15	Pum2	chr12	protein_coding	pumilio RNA-binding family member 2
chr12	8763937	8769003	+	8763937	8768988	A3SS	0.33	50	50	ENSMUST00000111123.9	ENSMUSG00000020594.15	Pum2	chr12	protein_coding	pumilio RNA-binding family member 2
chr12	8763937	8769006	+	8763937	8768988	A3SS	0.33	50	50	ENSMUST00000111123.9	ENSMUSG00000020594.15	Pum2	chr12	protein_coding	pumilio RNA-binding family member 2
chr12	8724480	8748091	+	8724170	8748091	A5SS	0.16	50	50	ENSMUST00000111123.9	ENSMUSG00000020594.15	Pum2	chr12	protein_coding	pumilio RNA-binding family member 2
chr12	8724826	8748091	+	8724170	8748091	A5SS	0.16	50	50	ENSMUST00000111123.9	ENSMUSG00000020594.15	Pum2	chr12	protein_coding	pumilio RNA-binding family member 2
chr12	8724833	8748091	+	8724170	8748091	A5SS	0.16	50	50	ENSMUST00000111123.9	ENSMUSG00000020594.15	Pum2	chr12	protein_coding	pumilio RNA-binding family member 2
chr12	8724839	8748091	+	8724170	8748091	A5SS	0.16	50	50	ENSMUST00000111123.9	ENSMUSG00000020594.15	Pum2	chr12	protein_coding	pumilio RNA-binding family member 2
chr12	8728231	8748091	+	8724170	8748091	A5SS	0.16	50	50	ENSMUST00000111123.9	ENSMUSG00000020594.15	Pum2	chr12	protein_coding	pumilio RNA-binding family member 2
chr12	8750222	8755933	+	8748159	8755933	A5SS	0.33	50	50	ENSMUST00000111123.9	ENSMUSG00000020594.15	Pum2	chr12	protein_coding	pumilio RNA-binding family member 2
chr12	8794749	8797157	+	8794743	8797157	A5SS	0.33	50	50	ENSMUST00000111123.9	ENSMUSG00000020594.15	Pum2	chr12	protein_coding	pumilio RNA-binding family member 2
chr12	8763937	8769006	+	8763937	8769003	A3SS	0.33	50	50	ENSMUST00000020915.10	ENSMUSG00000020594.15	Pum2	chr12	protein_coding	pumilio RNA-binding family member 2
chr12	8724826	8748091	+	8724480	8748091	A5SS	0.16	50	50	ENSMUST00000111122.9	ENSMUSG00000020594.15	Pum2	chr12	protein_coding	pumilio RNA-binding family member 2
chr12	8724833	8748091	+	8724480	8748091	A5SS	0.16	50	50	ENSMUST00000111122.9	ENSMUSG00000020594.15	Pum2	chr12	protein_coding	pumilio RNA-binding family member 2
chr12	8724839	8748091	+	8724480	8748091	A5SS	0.16	50	50	ENSMUST00000111122.9	ENSMUSG00000020594.15	Pum2	chr12	protein_coding	pumilio RNA-binding family member 2
chr12	8728231	8748091	+	8724480	8748091	A5SS	0.16	50	50	ENSMUST00000111122.9	ENSMUSG00000020594.15	Pum2	chr12	protein_coding	pumilio RNA-binding family member 2
chr12	8749188	8755933	+	8749188;8750222	8750149;8755933	ES	0.33	50	50	ENSMUST00000165293.8	ENSMUSG00000020594.15	Pum2	chr12	protein_coding	pumilio RNA-binding family member 2
chr12	8794466	8797157	+	8794466;8794749	8794615;8797157	ES	0.33	50	50	ENSMUST00000163569.8	ENSMUSG00000020594.15	Pum2	chr12	protein_coding	pumilio RNA-binding family member 2
chr12	8724833	8748091	+	8724826	8748091	A5SS	0.16	50	50	ENSMUST00000168361.8	ENSMUSG00000020594.15	Pum2	chr12	protein_coding	pumilio RNA-binding family member 2
chr12	8724839	8748091	+	8724826	8748091	A5SS	0.16	50	50	ENSMUST00000168361.8	ENSMUSG00000020594.15	Pum2	chr12	protein_coding	pumilio RNA-binding family member 2
chr12	8728231	8748091	+	8724826	8748091	A5SS	0.16	50	50	ENSMUST00000168361.8	ENSMUSG00000020594.15	Pum2	chr12	protein_coding	pumilio RNA-binding family member 2
chr12	8724839	8748091	+	8724833	8748091	A5SS	0.16	50	50	ENSMUST00000169750.8	ENSMUSG00000020594.15	Pum2	chr12	protein_coding	pumilio RNA-binding family member 2
chr12	8728231	8748091	+	8724833	8748091	A5SS	0.16	50	50	ENSMUST00000169750.8	ENSMUSG00000020594.15	Pum2	chr12	protein_coding	pumilio RNA-binding family member 2
chr12	8728231	8748091	+	8724839	8748091	A5SS	0.16	50	50	ENSMUST00000163730.8	ENSMUSG00000020594.15	Pum2	chr12	protein_coding	pumilio RNA-binding family member 2
chr12	8821839	8839407	+	8821701	8839407	A5SS	0.33	50	50	ENSMUST00000020911.14	ENSMUSG00000020592.15	Sdc1	chr12	protein_coding	syndecan 1
chr12	8822511	8839407	+	8821701	8839407	A5SS	0.33	50	50	ENSMUST00000020911.14	ENSMUSG00000020592.15	Sdc1	chr12	protein_coding	syndecan 1
chr12	8821839;8822511	8822353;8839407	+	8821839	8839407	cassetteExon	0.5	100	100	ENSMUST00000161883.2	ENSMUSG00000020592.15	Sdc1	chr12	protein_coding	syndecan 1
chr12	9031160	9035629	+	9031160;9032894	9032761;9035629	ES	0.5	50	50	ENSMUST00000085745.13	ENSMUSG00000066643.13	Wdr35	chr12	protein_coding	WD repeat domain 35
chr12	9040090	9046069	+	9040090;9045672	9045640;9046069	ES	0.5	50	50	ENSMUST00000085745.13	ENSMUSG00000066643.13	Wdr35	chr12	protein_coding	WD repeat domain 35
chr12	9085088	9088082	+	9085088	9085762	3pMXE	0.5	50	50	ENSMUST00000085741.2	ENSMUSG00000066637.3	Ttc32	chr12	protein_coding	tetratricopeptide repeat domain 32
chr12	9624742	9629095	+	9620169	9629095	A5SS	0.5	50	50	ENSMUST00000217975.2	ENSMUSG00000048387.9	Osr1	chr12	protein_coding	odd-skipped related transcription factor 1
chr12	9779576	9783064	+	9779576;9782369	9782251;9783064	ES	0.5	50	50	ENSMUST00000220360.2	ENSMUSG00000112787.2	Gm48790	chr12	lncRNA	predicted gene, 48790
chr12	10421743;10422246	10422073;10422832	+	10421743	10422832	cassetteExon	0.5	100	100	ENSMUST00000143739.9	ENSMUSG00000020622.18	Nt5c1b	chr12	protein_coding	5'-nucleotidase, cytosolic IB
chr12	10422969	10424723	+	10422975	10424723	A5SS	0.5	50	50	ENSMUST00000143739.9	ENSMUSG00000020622.18	Nt5c1b	chr12	protein_coding	5'-nucleotidase, cytosolic IB
chr12	10425586	10430799	+	10425586;10427287	10427158;10430799	ES	0.5	50	50	ENSMUST00000002456.10	ENSMUSG00000020622.18	Nt5c1b	chr12	protein_coding	5'-nucleotidase, cytosolic IB
chr12	10431490;10436983	10436890;10439804	+	10431490	10439804	cassetteExon	0.5	100	100	ENSMUST00000002456.10	ENSMUSG00000020622.18	Nt5c1b	chr12	protein_coding	5'-nucleotidase, cytosolic IB
chr12	10431490;10437539	10437447;10439804	+	10431490	10439804	cassetteExon	0.5	100	100	ENSMUST00000002456.10	ENSMUSG00000020622.18	Nt5c1b	chr12	protein_coding	5'-nucleotidase, cytosolic IB
chr12	10430921	10431365	+	10430921	10431306	A3SS	0.33	50	50	ENSMUST00000002456.10	ENSMUSG00000020622.18	Nt5c1b	chr12	protein_coding	5'-nucleotidase, cytosolic IB
chr12	10430921	10431405	+	10430921	10431306	A3SS	0.33	50	50	ENSMUST00000002456.10	ENSMUSG00000020622.18	Nt5c1b	chr12	protein_coding	5'-nucleotidase, cytosolic IB
chr12	10425169	10425419	+	10425241	10425419	A5SS	0.2	50	50	ENSMUST00000002456.10	ENSMUSG00000020622.18	Nt5c1b	chr12	protein_coding	5'-nucleotidase, cytosolic IB
chr12	10425193	10425419	+	10425241	10425419	A5SS	0.2	50	50	ENSMUST00000002456.10	ENSMUSG00000020622.18	Nt5c1b	chr12	protein_coding	5'-nucleotidase, cytosolic IB
chr12	10425204	10425419	+	10425241	10425419	A5SS	0.2	50	50	ENSMUST00000002456.10	ENSMUSG00000020622.18	Nt5c1b	chr12	protein_coding	5'-nucleotidase, cytosolic IB
chr12	10425237	10425419	+	10425241	10425419	A5SS	0.2	50	50	ENSMUST00000002456.10	ENSMUSG00000020622.18	Nt5c1b	chr12	protein_coding	5'-nucleotidase, cytosolic IB
chr12	10431490;10436983	10436890;10439804	+	10431490;10437539	10437447;10439804	MXE	0.5	100	100	ENSMUST00000147323.8	ENSMUSG00000020622.18	Nt5c1b	chr12	protein_coding	5'-nucleotidase, cytosolic IB
chr12	10425169	10425419	+	10425193	10425419	A5SS	0.2	50	50	ENSMUST00000217944.2	ENSMUSG00000020622.18	Nt5c1b	chr12	protein_coding	5'-nucleotidase, cytosolic IB
chr12	10425204	10425419	+	10425193	10425419	A5SS	0.2	50	50	ENSMUST00000217944.2	ENSMUSG00000020622.18	Nt5c1b	chr12	protein_coding	5'-nucleotidase, cytosolic IB
chr12	10425237	10425419	+	10425193	10425419	A5SS	0.2	50	50	ENSMUST00000217944.2	ENSMUSG00000020622.18	Nt5c1b	chr12	protein_coding	5'-nucleotidase, cytosolic IB
chr12	10430921	10431405	+	10430921	10431365	A3SS	0.33	50	50	ENSMUST00000218551.2	ENSMUSG00000020622.18	Nt5c1b	chr12	protein_coding	5'-nucleotidase, cytosolic IB
chr12	10425169	10425419	+	10425237	10425419	A5SS	0.2	50	50	ENSMUST00000218026.2	ENSMUSG00000020622.18	Nt5c1b	chr12	protein_coding	5'-nucleotidase, cytosolic IB
chr12	10425204	10425419	+	10425237	10425419	A5SS	0.2	50	50	ENSMUST00000218026.2	ENSMUSG00000020622.18	Nt5c1b	chr12	protein_coding	5'-nucleotidase, cytosolic IB
chr12	10425586	10430799	+	10427287	10430799	A5SS&ES	0.5	50	50	ENSMUST00000220257.2	ENSMUSG00000020622.18	Nt5c1b	chr12	protein_coding	5'-nucleotidase, cytosolic IB
chr12	10425169	10425419	+	10425204	10425419	A5SS	0.2	50	50	ENSMUST00000219049.2	ENSMUSG00000020622.18	Nt5c1b	chr12	protein_coding	5'-nucleotidase, cytosolic IB
chr12	10578863	10580972	+	10564779	10580972	A5SS	0.5	50	50	ENSMUST00000219221.2	ENSMUSG00000112792.2	Gm38407	chr12	lncRNA	predicted gene, 38407
chr12	11169949	11200718	-	11169949	11200186	5pMXE	0.33	50	50	ENSMUST00000055673.2	ENSMUSG00000043673.12	Kcns3	chr12	protein_coding	potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3
chr12	11169949	11200953	-	11169949	11200186	5pMXE	0.33	50	50	ENSMUST00000055673.2	ENSMUSG00000043673.12	Kcns3	chr12	protein_coding	potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3
chr12	11169949	11200718	-	11169949	11200953	A5SS	0.33	50	50	ENSMUST00000217974.2	ENSMUSG00000043673.12	Kcns3	chr12	protein_coding	potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3
chr12	11246508	11253900	-	11236538	11253900	A3SS	0.33	50	50	ENSMUST00000218277.2	ENSMUSG00000112041.2	9530020I12Rik	chr12	lncRNA	RIKEN cDNA 9530020I12 gene
chr12	11253478	11253900	-	11236538	11253900	A3SS	0.33	50	50	ENSMUST00000218277.2	ENSMUSG00000112041.2	9530020I12Rik	chr12	lncRNA	RIKEN cDNA 9530020I12 gene
chr12	11236538	11244397	-	11236538	11253900	A5SS	0.5	50	50	ENSMUST00000218277.2	ENSMUSG00000112041.2	9530020I12Rik	chr12	lncRNA	RIKEN cDNA 9530020I12 gene
chr12	11253478	11253900	-	11246508	11253900	A3SS	0.33	50	50	ENSMUST00000219371.2	ENSMUSG00000112041.2	9530020I12Rik	chr12	lncRNA	RIKEN cDNA 9530020I12 gene
chr12	11293334	11298216	-	11293334;11296351	11296290;11298216	ES	0.5	50	50	ENSMUST00000166117.4	ENSMUSG00000051235.11	Gen1	chr12	protein_coding	GEN1, Holliday junction 5' flap endonuclease
chr12	11311069	11315588	-	11311069;11312594	11312408;11315588	ES	0.33	50	50	ENSMUST00000166117.4	ENSMUSG00000051235.11	Gen1	chr12	protein_coding	GEN1, Holliday junction 5' flap endonuclease
chr12	11311004	11312408	-	11311069	11312408	A3SS	0.5	50	50	ENSMUST00000166117.4	ENSMUSG00000051235.11	Gen1	chr12	protein_coding	GEN1, Holliday junction 5' flap endonuclease
chr12	11312594	11315722	-	11312594	11315588	A5SS	0.5	50	50	ENSMUST00000166117.4	ENSMUSG00000051235.11	Gen1	chr12	protein_coding	GEN1, Holliday junction 5' flap endonuclease
chr12	11307015	11315588	-	11307015;11311069	11310883;11315588	ES	0.33	50	50	ENSMUST00000218547.2	ENSMUSG00000051235.11	Gen1	chr12	protein_coding	GEN1, Holliday junction 5' flap endonuclease
chr12	11312594	11315588	-	11307015	11315588	A3SS	0.33	50	50	ENSMUST00000218262.2	ENSMUSG00000051235.11	Gen1	chr12	protein_coding	GEN1, Holliday junction 5' flap endonuclease
chr12	11311069	11315588	-	11312594	11315588	A3SS&ES	0.33	50	50	ENSMUST00000218259.2	ENSMUSG00000051235.11	Gen1	chr12	protein_coding	GEN1, Holliday junction 5' flap endonuclease
chr12	11311069	11315588	-	11311069	11312408	A5SS&ES	0.5	50	50	ENSMUST00000219600.2	ENSMUSG00000051235.11	Gen1	chr12	protein_coding	GEN1, Holliday junction 5' flap endonuclease
chr12	11321872	11326261	+	11321872;11324112	11323995;11326261	ES	0.5	50	50	ENSMUST00000020931.6	ENSMUSG00000020608.8	Smc6	chr12	protein_coding	structural maintenance of chromosomes 6
chr12	11324112	11329606	+	11324112;11326366	11326261;11329606	ES	0.33	50	50	ENSMUST00000020931.6	ENSMUSG00000020608.8	Smc6	chr12	protein_coding	structural maintenance of chromosomes 6
chr12	11347286	11349260	+	11347286;11348343	11348263;11349260	ES	0.5	50	50	ENSMUST00000020931.6	ENSMUSG00000020608.8	Smc6	chr12	protein_coding	structural maintenance of chromosomes 6
chr12	11364760;11366538	11366497;11366620	+	11364760	11366620	cassetteExon	0.5	100	100	ENSMUST00000020931.6	ENSMUSG00000020608.8	Smc6	chr12	protein_coding	structural maintenance of chromosomes 6
chr12	11316289	11320510	+	11316289	11321730	A3SS	0.5	50	50	ENSMUST00000020931.6	ENSMUSG00000020608.8	Smc6	chr12	protein_coding	structural maintenance of chromosomes 6
chr12	11345084	11347104	+	11345084	11347151	A3SS	0.5	50	50	ENSMUST00000020931.6	ENSMUSG00000020608.8	Smc6	chr12	protein_coding	structural maintenance of chromosomes 6
chr12	11351668	11354516	+	11351668	11356079	A3SS	0.5	50	50	ENSMUST00000020931.6	ENSMUSG00000020608.8	Smc6	chr12	protein_coding	structural maintenance of chromosomes 6
chr12	11355287	11356079	+	11351668	11356079	A5SS	0.5	50	50	ENSMUST00000020931.6	ENSMUSG00000020608.8	Smc6	chr12	protein_coding	structural maintenance of chromosomes 6
chr12	11321872	11329606	+	11321872;11324112	11323995;11329606	ES	0.33	50	50	ENSMUST00000218022.2	ENSMUSG00000020608.8	Smc6	chr12	protein_coding	structural maintenance of chromosomes 6
chr12	11321872;11326366	11326261;11329606	+	11321872;11324112	11323995;11329606	MXE	0.5	100	100	ENSMUST00000218022.2	ENSMUSG00000020608.8	Smc6	chr12	protein_coding	structural maintenance of chromosomes 6
chr12	11316700	11320510	+	11316289	11320510	A5SS	0.5	50	50	ENSMUST00000219041.2	ENSMUSG00000020608.8	Smc6	chr12	protein_coding	structural maintenance of chromosomes 6
chr12	11321872;11326366	11326261;11329606	+	11321872	11329606	cassetteExon	0.5	100	100	ENSMUST00000217906.2	ENSMUSG00000020608.8	Smc6	chr12	protein_coding	structural maintenance of chromosomes 6
chr12	11351668	11356079	+	11351668;11355287	11354516;11356079	ES	0.5	50	50	ENSMUST00000218319.2	ENSMUSG00000020608.8	Smc6	chr12	protein_coding	structural maintenance of chromosomes 6
chr12	11436982	11486358	-	11436982	11485589	5pMXE	0.5	50	50	ENSMUST00000220506.2	ENSMUSG00000054459.9	Vsnl1	chr12	protein_coding	visinin-like 1
chr12	11488320	11490861	+	11488311	11490861	A5SS	0.5	50	50	ENSMUST00000220342.2	ENSMUSG00000097841.3	4930511A02Rik	chr12	lncRNA	RIKEN cDNA 4930511A02 gene
chr12	12312239	12354182	+	12312239;12326416	12326344;12354182	ES	0.33	50	50	ENSMUST00000069066.14	ENSMUSG00000020589.18	Cyria	chr12	protein_coding	CYFIP related Rac1 interactor A
chr12	12312239;12345689	12345617;12354182	+	12312239;12326416	12326344;12354182	MXE	0.5	100	100	ENSMUST00000069066.14	ENSMUSG00000020589.18	Cyria	chr12	protein_coding	CYFIP related Rac1 interactor A
chr12	12390759	12403961	+	12390759	12408046	A3SS	0.5	50	50	ENSMUST00000069066.14	ENSMUSG00000020589.18	Cyria	chr12	protein_coding	CYFIP related Rac1 interactor A
chr12	12312239;12345689	12345617;12354182	+	12312239	12354182	cassetteExon	0.5	100	100	ENSMUST00000221782.2	ENSMUSG00000020589.18	Cyria	chr12	protein_coding	CYFIP related Rac1 interactor A
chr12	12955067	12956065	+	12952928	12956065	A5SS	0.5	50	50	ENSMUST00000181381.3	ENSMUSG00000097627.3	4930519A11Rik	chr12	lncRNA	RIKEN cDNA 4930519A11 gene
chr12	12991435	12991637	-	12990487	12991637	A3SS	0.5	50	50	ENSMUST00000043396.15	ENSMUSG00000037169.16	Mycn	chr12	protein_coding	v-myc avian myelocytomatosis viral related oncogene, neuroblastoma derived
chr12	13295731	13296027	-	13295750	13296027	A3SS	0.5	50	50	ENSMUST00000071103.10	ENSMUSG00000037149.11	Ddx1	chr12	protein_coding	DEAD box helicase 1
chr12	13537361	13563371	+	13534045	13563371	A5SS	0.33	50	50	ENSMUST00000042953.10	ENSMUSG00000020576.11	Nbas	chr12	protein_coding	neuroblastoma amplified sequence
chr12	13554988	13563371	+	13534045	13563371	A5SS	0.33	50	50	ENSMUST00000042953.10	ENSMUSG00000020576.11	Nbas	chr12	protein_coding	neuroblastoma amplified sequence
chr12	13554988	13563371	+	13537361	13563371	A5SS	0.33	50	50	ENSMUST00000221714.2	ENSMUSG00000020576.11	Nbas	chr12	protein_coding	neuroblastoma amplified sequence
chr12	14200761	14201207	-	14200761	14201823	A5SS	0.5	50	50	ENSMUST00000020926.8	ENSMUSG00000020607.8	Lratd1	chr12	protein_coding	LRAT domain containing 1
chr12	14311634;14327820	14327694;14331208	+	14311634	14331208	cassetteExon	0.5	100	100	ENSMUST00000222024.2	ENSMUSG00000113336.2	Gm16497	chr12	lncRNA	predicted gene 16497
chr12	15046644;15047910	15047840;15059084	-	15046644	15059084	cassetteExon	0.5	100	100	ENSMUST00000221439.2	ENSMUSG00000113644.2	4930448C13Rik	chr12	lncRNA	RIKEN cDNA 4930448C13 gene
chr12	15059195;15065046	15064957;15099343	-	15059195	15099343	cassetteExon	0.5	100	100	ENSMUST00000221439.2	ENSMUSG00000113644.2	4930448C13Rik	chr12	lncRNA	RIKEN cDNA 4930448C13 gene
chr12	15059195;15072414	15072366;15099343	-	15059195	15099343	cassetteExon	0.5	100	100	ENSMUST00000221439.2	ENSMUSG00000113644.2	4930448C13Rik	chr12	lncRNA	RIKEN cDNA 4930448C13 gene
chr12	15090266	15099343	-	15059195	15099343	A3SS	0.25	50	50	ENSMUST00000221439.2	ENSMUSG00000113644.2	4930448C13Rik	chr12	lncRNA	RIKEN cDNA 4930448C13 gene
chr12	15099433	15100301	-	15099433	15101322	A5SS	0.5	50	50	ENSMUST00000221439.2	ENSMUSG00000113644.2	4930448C13Rik	chr12	lncRNA	RIKEN cDNA 4930448C13 gene
chr12	15059195;15072414	15072366;15099343	-	15059195;15065046	15064957;15099343	MXE	0.5	100	100	ENSMUST00000220891.2	ENSMUSG00000113644.2	4930448C13Rik	chr12	lncRNA	RIKEN cDNA 4930448C13 gene
chr12	15090266	15099343	-	15065046	15099343	A3SS	0.25	50	50	ENSMUST00000220891.2	ENSMUSG00000113644.2	4930448C13Rik	chr12	lncRNA	RIKEN cDNA 4930448C13 gene
chr12	15065046	15067599	-	15065046	15099343	A5SS	0.5	50	50	ENSMUST00000220891.2	ENSMUSG00000113644.2	4930448C13Rik	chr12	lncRNA	RIKEN cDNA 4930448C13 gene
chr12	15090266	15099343	-	15072414	15099343	A3SS	0.25	50	50	ENSMUST00000221781.2	ENSMUSG00000113644.2	4930448C13Rik	chr12	lncRNA	RIKEN cDNA 4930448C13 gene
chr12	15067646	15072366	-	15059195	15072366	A3SS	0.5	50	50	ENSMUST00000221610.2	ENSMUSG00000113644.2	4930448C13Rik	chr12	lncRNA	RIKEN cDNA 4930448C13 gene
chr12	15141405	15186035	+	15141405	15146017	3pMXE	0.33	50	50	ENSMUST00000221065.2	ENSMUSG00000113285.2	Gm36128	chr12	transcribed_processed_pseudogene	predicted gene, 36128
chr12	15141405	15146021	+	15141405	15146017	A3SS	0.33	50	50	ENSMUST00000221065.2	ENSMUSG00000113285.2	Gm36128	chr12	transcribed_processed_pseudogene	predicted gene, 36128
chr12	15101769	15116504	+	15101443	15116504	A5SS	0.5	50	50	ENSMUST00000221065.2	ENSMUSG00000113285.2	Gm36128	chr12	transcribed_processed_pseudogene	predicted gene, 36128
chr12	15141405	15146021	+	15141405	15186035	A3SS	0.33	50	50	ENSMUST00000222816.2	ENSMUSG00000113285.2	Gm36128	chr12	transcribed_processed_pseudogene	predicted gene, 36128
chr12	15179587	15186035	+	15141405	15186035	A5SS	0.5	50	50	ENSMUST00000222816.2	ENSMUSG00000113285.2	Gm36128	chr12	transcribed_processed_pseudogene	predicted gene, 36128
chr12	15767652	15768307	+	15656504	15768307	A5SS	0.5	50	50	ENSMUST00000222542.2	ENSMUSG00000098158.3	Gm4804	chr12	transcribed_processed_pseudogene	predicted gene 4804
chr12	15776029	15778049	+	15775466	15778049	A5SS	0.5	50	50	ENSMUST00000222542.2	ENSMUSG00000098158.3	Gm4804	chr12	transcribed_processed_pseudogene	predicted gene 4804
chr12	15859989	15866784	-	15859989	15865232	A5SS	0.5	50	50	ENSMUST00000020922.8	ENSMUSG00000020601.9	Trib2	chr12	protein_coding	tribbles pseudokinase 2
chr12	15859989;15865487	15865232;15866784	-	15859989	15866784	cassetteExon	0.5	100	100	ENSMUST00000221518.2	ENSMUSG00000020601.9	Trib2	chr12	protein_coding	tribbles pseudokinase 2
chr12	15866599	15866784	-	15859989	15866784	A3SS	0.33	50	50	ENSMUST00000221518.2	ENSMUSG00000020601.9	Trib2	chr12	protein_coding	tribbles pseudokinase 2
chr12	15866599	15866784	-	15865487	15866784	A3SS	0.33	50	50	ENSMUST00000221215.2	ENSMUSG00000020601.9	Trib2	chr12	protein_coding	tribbles pseudokinase 2
chr12	16235927	16255511	+	16235927;16246476	16246251;16255511	ES	0.25	50	50	ENSMUST00000222199.2	ENSMUSG00000113735.2	Gm48607	chr12	lncRNA	predicted gene, 48607
chr12	16235927;16241389	16241340;16255511	+	16235927;16246476	16246251;16255511	MXE	0.5	100	100	ENSMUST00000222199.2	ENSMUSG00000113735.2	Gm48607	chr12	lncRNA	predicted gene, 48607
chr12	16236984	16255511	+	16246476	16255511	A5SS&ES	0.25	50	50	ENSMUST00000222199.2	ENSMUSG00000113735.2	Gm48607	chr12	lncRNA	predicted gene, 48607
chr12	16235927;16241389	16241340;16255511	+	16235927	16255511	cassetteExon	0.5	100	100	ENSMUST00000222326.2	ENSMUSG00000113735.2	Gm48607	chr12	lncRNA	predicted gene, 48607
chr12	16236984	16255511	+	16235927	16255511	A5SS	0.25	50	50	ENSMUST00000222326.2	ENSMUSG00000113735.2	Gm48607	chr12	lncRNA	predicted gene, 48607
chr12	16236984	16241340	+	16235927	16241340	A5SS	0.5	50	50	ENSMUST00000222070.2	ENSMUSG00000113735.2	Gm48607	chr12	lncRNA	predicted gene, 48607
chr12	16236984	16255511	+	16241389	16255511	A5SS&ES	0.25	50	50	ENSMUST00000222070.2	ENSMUSG00000113735.2	Gm48607	chr12	lncRNA	predicted gene, 48607
chr12	16236984;16241389	16241340;16255511	+	16236984	16255511	cassetteExon	0.5	100	100	ENSMUST00000222189.2	ENSMUSG00000113735.2	Gm48607	chr12	lncRNA	predicted gene, 48607
chr12	16246476	16255511	+	16241389	16255511	A5SS	0.33	50	50	ENSMUST00000221064.2	ENSMUSG00000113735.2	Gm48607	chr12	lncRNA	predicted gene, 48607
chr12	16618520	16623661	-	16618520;16621263	16621165;16623661	ES	0.5	50	50	ENSMUST00000067124.6	ENSMUSG00000020593.17	Lpin1	chr12	protein_coding	lipin 1
chr12	16630905	16653839	-	16630905	16639719	5pMXE	0.16	50	50	ENSMUST00000067124.6	ENSMUSG00000020593.17	Lpin1	chr12	protein_coding	lipin 1
chr12	16630905	16660778	-	16630905	16639719	5pMXE	0.16	50	50	ENSMUST00000067124.6	ENSMUSG00000020593.17	Lpin1	chr12	protein_coding	lipin 1
chr12	16630905	16662554	-	16630905	16639719	5pMXE	0.16	50	50	ENSMUST00000067124.6	ENSMUSG00000020593.17	Lpin1	chr12	protein_coding	lipin 1
chr12	16608502;16608722	16608645;16610983	-	16608502	16610983	cassetteExon	0.5	100	100	ENSMUST00000067124.6	ENSMUSG00000020593.17	Lpin1	chr12	protein_coding	lipin 1
chr12	16630905;16634652	16634509;16639719	-	16630905	16639719	cassetteExon	0.5	100	100	ENSMUST00000067124.6	ENSMUSG00000020593.17	Lpin1	chr12	protein_coding	lipin 1
chr12	16601884	16603950	-	16599004	16603950	A3SS	0.5	50	50	ENSMUST00000067124.6	ENSMUSG00000020593.17	Lpin1	chr12	protein_coding	lipin 1
chr12	16630905	16639499	-	16630905	16639719	A5SS	0.16	50	50	ENSMUST00000067124.6	ENSMUSG00000020593.17	Lpin1	chr12	protein_coding	lipin 1
chr12	16630905	16662554	-	16630905	16660778	5pMXE	0.16	50	50	ENSMUST00000239165.2	ENSMUSG00000020593.17	Lpin1	chr12	protein_coding	lipin 1
chr12	16630905	16634509	-	16630905	16660778	A5SS	0.16	50	50	ENSMUST00000239165.2	ENSMUSG00000020593.17	Lpin1	chr12	protein_coding	lipin 1
chr12	16630905	16639499	-	16630905	16660778	A5SS	0.16	50	50	ENSMUST00000239165.2	ENSMUSG00000020593.17	Lpin1	chr12	protein_coding	lipin 1
chr12	16630905	16653839	-	16630905	16660778	A5SS	0.16	50	50	ENSMUST00000239165.2	ENSMUSG00000020593.17	Lpin1	chr12	protein_coding	lipin 1
chr12	16630905	16634509	-	16630905	16662554	A5SS	0.16	50	50	ENSMUST00000238839.2	ENSMUSG00000020593.17	Lpin1	chr12	protein_coding	lipin 1
chr12	16630905	16639499	-	16630905	16662554	A5SS	0.16	50	50	ENSMUST00000238839.2	ENSMUSG00000020593.17	Lpin1	chr12	protein_coding	lipin 1
chr12	16630905	16653839	-	16630905	16662554	A5SS	0.16	50	50	ENSMUST00000238839.2	ENSMUSG00000020593.17	Lpin1	chr12	protein_coding	lipin 1
chr12	16630905	16639499	-	16630905	16634509	A5SS&ES	0.33	50	50	ENSMUST00000222989.2	ENSMUSG00000020593.17	Lpin1	chr12	protein_coding	lipin 1
chr12	16630905	16634509	-	16630905	16653839	A5SS	0.16	50	50	ENSMUST00000221297.2	ENSMUSG00000020593.17	Lpin1	chr12	protein_coding	lipin 1
chr12	16630905	16639499	-	16630905	16653839	A5SS	0.16	50	50	ENSMUST00000221297.2	ENSMUSG00000020593.17	Lpin1	chr12	protein_coding	lipin 1
chr12	16704124	16706598	+	16704124	16706691	A3SS	0.5	50	50	ENSMUST00000221596.2	ENSMUSG00000020591.12	Ntsr2	chr12	protein_coding	neurotensin receptor 2
chr12	16706813	16708366	+	16706871	16708366	A5SS	0.33	50	50	ENSMUST00000221596.2	ENSMUSG00000020591.12	Ntsr2	chr12	protein_coding	neurotensin receptor 2
chr12	16706690	16708366	+	16706871	16708366	A5SS	0.33	50	50	ENSMUST00000111064.3	ENSMUSG00000020591.12	Ntsr2	chr12	protein_coding	neurotensin receptor 2
chr12	16706813	16708366	+	16706690	16708366	A5SS	0.33	50	50	ENSMUST00000220892.2	ENSMUSG00000020591.12	Ntsr2	chr12	protein_coding	neurotensin receptor 2
chr12	16752665	16756097	-	16752665;16754567	16754431;16756097	ES	0.5	50	50	ENSMUST00000048064.16	ENSMUSG00000036523.17	Greb1	chr12	protein_coding	gene regulated by estrogen in breast cancer protein
chr12	16790255	16850648	-	16790255	16807142	5pMXE	0.5	50	50	ENSMUST00000048064.16	ENSMUSG00000036523.17	Greb1	chr12	protein_coding	gene regulated by estrogen in breast cancer protein
chr12	16756289	16757804	-	16756292	16757804	A3SS	0.5	50	50	ENSMUST00000048064.16	ENSMUSG00000036523.17	Greb1	chr12	protein_coding	gene regulated by estrogen in breast cancer protein
chr12	16758667	16759433	-	16758751	16759433	A3SS	0.5	50	50	ENSMUST00000048064.16	ENSMUSG00000036523.17	Greb1	chr12	protein_coding	gene regulated by estrogen in breast cancer protein
chr12	16758667	16759410	-	16758667	16759433	A5SS	0.5	50	50	ENSMUST00000159120.8	ENSMUSG00000036523.17	Greb1	chr12	protein_coding	gene regulated by estrogen in breast cancer protein
chr12	16756289	16757804	-	16756289	16757736	A5SS	0.5	50	50	ENSMUST00000161036.8	ENSMUSG00000036523.17	Greb1	chr12	protein_coding	gene regulated by estrogen in breast cancer protein
chr12	16809534	16850648	-	16790255	16850648	A3SS	0.5	50	50	ENSMUST00000161998.3	ENSMUSG00000036523.17	Greb1	chr12	protein_coding	gene regulated by estrogen in breast cancer protein
chr12	16861316	16863848	+	16861316;16862373	16862290;16863848	ES	0.5	50	50	ENSMUST00000220794.2	ENSMUSG00000057469.9	E2f6	chr12	protein_coding	E2F transcription factor 6
chr12	16861316	16862250	+	16861316	16862290	A3SS	0.25	50	50	ENSMUST00000220794.2	ENSMUSG00000057469.9	E2f6	chr12	protein_coding	E2F transcription factor 6
chr12	16861316;16863913	16863848;16866401	+	16861316	16866401	cassetteExon	0.5	100	100	ENSMUST00000220707.2	ENSMUSG00000057469.9	E2f6	chr12	protein_coding	E2F transcription factor 6
chr12	16861316	16862250	+	16861316	16866401	A3SS	0.25	50	50	ENSMUST00000220707.2	ENSMUSG00000057469.9	E2f6	chr12	protein_coding	E2F transcription factor 6
chr12	16861316	16862290	+	16861316	16866401	A3SS	0.25	50	50	ENSMUST00000220707.2	ENSMUSG00000057469.9	E2f6	chr12	protein_coding	E2F transcription factor 6
chr12	16861316;16862373	16862250;16863848	+	16861316	16863848	cassetteExon	0.5	100	100	ENSMUST00000221541.2	ENSMUSG00000057469.9	E2f6	chr12	protein_coding	E2F transcription factor 6
chr12	17023150;17023611	17023441;17024843	+	17023150	17024843	cassetteExon	0.5	100	100	ENSMUST00000020904.8	ENSMUSG00000020580.11	Rock2	chr12	protein_coding	Rho-associated coiled-coil containing protein kinase 2
chr12	17047857	17050230	-	17047857	17049814	5pMXE	0.5	50	50	ENSMUST00000140933.2	ENSMUSG00000045679.15	Pqlc3	chr12	protein_coding	PQ loop repeat containing
chr12	17042320	17045615	-	17043574	17045615	A3SS	0.5	50	50	ENSMUST00000140933.2	ENSMUSG00000045679.15	Pqlc3	chr12	protein_coding	PQ loop repeat containing
chr12	17043574	17047775	-	17043574	17045615	A5SS&ES	0.5	50	50	ENSMUST00000140933.2	ENSMUSG00000045679.15	Pqlc3	chr12	protein_coding	PQ loop repeat containing
chr12	17042320	17045615	-	17042320;17043574	17043454;17045615	ES	0.5	50	50	ENSMUST00000054536.11	ENSMUSG00000045679.15	Pqlc3	chr12	protein_coding	PQ loop repeat containing
chr12	17043338	17043454	-	17042320	17043454	A3SS	0.5	50	50	ENSMUST00000054536.11	ENSMUSG00000045679.15	Pqlc3	chr12	protein_coding	PQ loop repeat containing
chr12	17047657	17047775	-	17047704	17047775	A3SS	0.33	50	50	ENSMUST00000054536.11	ENSMUSG00000045679.15	Pqlc3	chr12	protein_coding	PQ loop repeat containing
chr12	17042320;17043574	17043454;17047775	-	17042320;17047704	17045615;17047775	MXE	0.5	100	100	ENSMUST00000222203.2	ENSMUSG00000045679.15	Pqlc3	chr12	protein_coding	PQ loop repeat containing
chr12	17047657	17047775	-	17043574	17047775	A3SS	0.33	50	50	ENSMUST00000141232.8	ENSMUSG00000045679.15	Pqlc3	chr12	protein_coding	PQ loop repeat containing
chr12	17047704	17047775	-	17043574	17047775	A3SS	0.33	50	50	ENSMUST00000141232.8	ENSMUSG00000045679.15	Pqlc3	chr12	protein_coding	PQ loop repeat containing
chr12	17057237	17061129	-	17057237;17058313	17058274;17061129	ES	0.5	50	50	ENSMUST00000095823.9	ENSMUSG00000071398.9	2410004P03Rik	chr12	protein_coding	RIKEN cDNA 2410004P03 gene
chr12	17338181	17341430	-	17338181;17339134	17338997;17341430	ES	0.5	50	50	ENSMUST00000095820.12	ENSMUSG00000020566.20	Atp6v1c2	chr12	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit C2
chr12	17373511	17375135	-	17373511	17374631	5pMXE	0.5	50	50	ENSMUST00000095820.12	ENSMUSG00000020566.20	Atp6v1c2	chr12	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit C2
chr12	17351216;17357501	17357472;17358273	-	17351216	17358273	cassetteExon	0.5	100	100	ENSMUST00000095820.12	ENSMUSG00000020566.20	Atp6v1c2	chr12	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit C2
chr12	17358358;17364590	17364487;17371599	-	17358358	17371599	cassetteExon	0.5	100	100	ENSMUST00000095820.12	ENSMUSG00000020566.20	Atp6v1c2	chr12	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit C2
chr12	17347855	17351122	-	17347821	17351122	A3SS	0.5	50	50	ENSMUST00000095820.12	ENSMUSG00000020566.20	Atp6v1c2	chr12	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit C2
chr12	17373428	17374631	-	17373511	17374631	A3SS	0.5	50	50	ENSMUST00000095820.12	ENSMUSG00000020566.20	Atp6v1c2	chr12	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit C2
chr12	17375417	17379261	-	17375238	17379261	A3SS	0.5	50	50	ENSMUST00000153090.8	ENSMUSG00000020566.20	Atp6v1c2	chr12	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit C2
chr12	17595169	17597186	+	17595169	17597097	A3SS	0.5	50	50	ENSMUST00000171737.3	ENSMUSG00000011179.9	Odc1	chr12	protein_coding	ornithine decarboxylase, structural 1
chr12	17597401	17597734	+	17597401	17597634	A3SS	0.5	50	50	ENSMUST00000171737.3	ENSMUSG00000011179.9	Odc1	chr12	protein_coding	ornithine decarboxylase, structural 1
chr12	17613685	17628387	+	17613685	17613960	3pMXE	0.5	50	50	ENSMUST00000222758.2	ENSMUSG00000113093.2	Gm36862	chr12	lncRNA	predicted gene, 36862
chr12	17653490;17654363	17654271;17655101	-	17653490	17655101	cassetteExon	0.5	100	100	ENSMUST00000222977.2	ENSMUSG00000114062.2	Gm48313	chr12	lncRNA	predicted gene, 48313
chr12	17817300	17836148	+	17741047	17836148	A5SS	0.5	50	50	ENSMUST00000071858.5	ENSMUSG00000071379.3	Hpcal1	chr12	protein_coding	hippocalcin-like 1
chr12	18112439	18113723	+	18112307	18113723	A5SS	0.5	50	50	ENSMUST00000223186.2	ENSMUSG00000113642.2	Gm49329	chr12	transcribed_unprocessed_pseudogene	predicted gene, 49329
chr12	17985254	17988790	+	17983862	17988790	A5SS	0.5	50	50	ENSMUST00000221539.2	ENSMUSG00000113536.2	Gm49327	chr12	transcribed_unprocessed_pseudogene	predicted gene, 49327
chr12	18564864	18581611	+	18564936	18581611	A5SS	0.5	50	50	ENSMUST00000177778.9	ENSMUSG00000073197.10	5730507C01Rik	chr12	protein_coding	RIKEN cDNA 5730507C01 gene
chr12	19611557	19612997	+	19577854	19612997	A5SS	0.5	50	50	ENSMUST00000222009.2	ENSMUSG00000114140.2	Gm6943	chr12	unprocessed_pseudogene	predicted gene 6943
chr12	20665430	20683110	+	20665430	20714496	A3SS	0.5	50	50	ENSMUST00000223281.2	ENSMUSG00000113157.3	Gm48693	chr12	lncRNA	predicted gene, 48693
chr12	20716386	20719837	+	20716386	20719877	A3SS	0.5	50	50	ENSMUST00000231814.2	ENSMUSG00000116635.2	Gm49699	chr12	transcribed_unprocessed_pseudogene	predicted gene, 49699
chr12	20964842	20970843	-	20964842;20965792	20965749;20970843	ES	0.25	50	50	ENSMUST00000140360.8	ENSMUSG00000085642.9	3110053B16Rik	chr12	transcribed_unprocessed_pseudogene	RIKEN cDNA 3110053B16 gene
chr12	20927096;20952660	20952271;20964760	-	20927096	20964760	cassetteExon	0.5	100	100	ENSMUST00000140360.8	ENSMUSG00000085642.9	3110053B16Rik	chr12	transcribed_unprocessed_pseudogene	RIKEN cDNA 3110053B16 gene
chr12	20927039	20970843	-	20965792	20970843	A3SS&ES	0.25	50	50	ENSMUST00000140360.8	ENSMUSG00000085642.9	3110053B16Rik	chr12	transcribed_unprocessed_pseudogene	RIKEN cDNA 3110053B16 gene
chr12	20927096;20964842	20964760;20970843	-	20927096	20970843	cassetteExon	0.5	100	100	ENSMUST00000143905.2	ENSMUSG00000085642.9	3110053B16Rik	chr12	transcribed_unprocessed_pseudogene	RIKEN cDNA 3110053B16 gene
chr12	20927039	20970843	-	20927096	20970843	A3SS	0.25	50	50	ENSMUST00000143905.2	ENSMUSG00000085642.9	3110053B16Rik	chr12	transcribed_unprocessed_pseudogene	RIKEN cDNA 3110053B16 gene
chr12	20965792	20970843	-	20927096	20970843	A3SS	0.25	50	50	ENSMUST00000143905.2	ENSMUSG00000085642.9	3110053B16Rik	chr12	transcribed_unprocessed_pseudogene	RIKEN cDNA 3110053B16 gene
chr12	20927096	20952271	-	20927096	20970843	A5SS	0.33	50	50	ENSMUST00000143905.2	ENSMUSG00000085642.9	3110053B16Rik	chr12	transcribed_unprocessed_pseudogene	RIKEN cDNA 3110053B16 gene
chr12	20964842	20970843	-	20927039	20970843	A3SS	0.25	50	50	ENSMUST00000127917.2	ENSMUSG00000085642.9	3110053B16Rik	chr12	transcribed_unprocessed_pseudogene	RIKEN cDNA 3110053B16 gene
chr12	20950935	20952271	-	20927096	20952271	A3SS	0.5	50	50	ENSMUST00000144811.2	ENSMUSG00000069755.6	Zfp125	chr12	transcribed_unprocessed_pseudogene	zinc finger protein 125
chr12	20950935	20952534	-	20952331	20952534	A3SS&ES	0.5	50	50	ENSMUST00000144811.2	ENSMUSG00000069755.6	Zfp125	chr12	transcribed_unprocessed_pseudogene	zinc finger protein 125
chr12	20950935;20952331	20952271;20952534	-	20950935	20952534	cassetteExon	0.5	100	100	ENSMUST00000079237.7	ENSMUSG00000069755.6	Zfp125	chr12	transcribed_unprocessed_pseudogene	zinc finger protein 125
chr12	21040873	21062988	+	21040873	21092936	A3SS	0.5	50	50	ENSMUST00000174530.2	ENSMUSG00000052632.17	Asap2	chr12	protein_coding	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
chr12	21094831	21098191	+	21094831	21126308	A3SS	0.5	50	50	ENSMUST00000174530.2	ENSMUSG00000052632.17	Asap2	chr12	protein_coding	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
chr12	21162170	21218205	+	21135786	21218205	A5SS	0.5	50	50	ENSMUST00000174530.2	ENSMUSG00000052632.17	Asap2	chr12	protein_coding	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
chr12	21263226	21267976	+	21263226;21264371	21264363;21267976	ES	0.5	50	50	ENSMUST00000064595.15	ENSMUSG00000052632.17	Asap2	chr12	protein_coding	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
chr12	21304468	21308011	+	21304468;21306610	21306476;21308011	ES	0.5	50	50	ENSMUST00000064595.15	ENSMUSG00000052632.17	Asap2	chr12	protein_coding	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
chr12	21262885	21263140	+	21262885	21263149	A3SS	0.5	50	50	ENSMUST00000064595.15	ENSMUSG00000052632.17	Asap2	chr12	protein_coding	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
chr12	21268258	21274306	+	21268258	21289556	A3SS	0.5	50	50	ENSMUST00000090834.13	ENSMUSG00000052632.17	Asap2	chr12	protein_coding	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
chr12	21280957	21289556	+	21268258	21289556	A5SS	0.5	50	50	ENSMUST00000090834.13	ENSMUSG00000052632.17	Asap2	chr12	protein_coding	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
chr12	21320958	21321380	-	21320958	21321420	A5SS	0.5	50	50	ENSMUST00000232072.2	ENSMUSG00000062352.16	Itgb1bp1	chr12	protein_coding	integrin beta 1 binding protein 1
chr12	21329531	21335853	-	21329531	21336107	A5SS	0.5	50	50	ENSMUST00000232072.2	ENSMUSG00000062352.16	Itgb1bp1	chr12	protein_coding	integrin beta 1 binding protein 1
chr12	21335712	21336427	+	21335712	21336447	A3SS	0.5	50	50	ENSMUST00000221711.2	ENSMUSG00000054309.10	Cpsf3	chr12	protein_coding	cleavage and polyadenylation specificity factor 3
chr12	21336545	21340249	+	21336545;21336951	21336874;21340249	ES	0.5	50	50	ENSMUST00000221507.2	ENSMUSG00000054309.10	Cpsf3	chr12	protein_coding	cleavage and polyadenylation specificity factor 3
chr12	21336545	21336806	+	21336545	21336874	A3SS	0.33	50	50	ENSMUST00000221507.2	ENSMUSG00000054309.10	Cpsf3	chr12	protein_coding	cleavage and polyadenylation specificity factor 3
chr12	21336545;21336951	21336806;21340249	+	21336545	21340249	cassetteExon	0.5	100	100	ENSMUST00000222474.2	ENSMUSG00000054309.10	Cpsf3	chr12	protein_coding	cleavage and polyadenylation specificity factor 3
chr12	21349310	21350043	+	21347940	21350043	A5SS	0.5	50	50	ENSMUST00000067284.10	ENSMUSG00000054309.10	Cpsf3	chr12	protein_coding	cleavage and polyadenylation specificity factor 3
chr12	21355470	21356774	+	21355456	21356774	A5SS	0.5	50	50	ENSMUST00000067284.10	ENSMUSG00000054309.10	Cpsf3	chr12	protein_coding	cleavage and polyadenylation specificity factor 3
chr12	21369932	21370728	+	21369932	21371335	A3SS	0.5	50	50	ENSMUST00000076813.8	ENSMUSG00000062054.8	Iah1	chr12	protein_coding	isoamyl acetate-hydrolyzing esterase 1 homolog
chr12	21395711	21397298	-	21395711;21396074	21396018;21397298	ES	0.5	50	50	ENSMUST00000101551.10	ENSMUSG00000052593.17	Adam17	chr12	protein_coding	a disintegrin and metallopeptidase domain 17
chr12	21404014	21423337	-	21404014;21411792	21411660;21423337	ES	0.5	50	50	ENSMUST00000101551.10	ENSMUSG00000052593.17	Adam17	chr12	protein_coding	a disintegrin and metallopeptidase domain 17
chr12	21404014;21405707	21405609;21411660	-	21404014	21411660	cassetteExon	0.5	100	100	ENSMUST00000101551.10	ENSMUSG00000052593.17	Adam17	chr12	protein_coding	a disintegrin and metallopeptidase domain 17
chr12	21379156	21380034	-	21379133	21380034	A3SS	0.5	50	50	ENSMUST00000101551.10	ENSMUSG00000052593.17	Adam17	chr12	protein_coding	a disintegrin and metallopeptidase domain 17
chr12	21397450	21399786	-	21397431	21399786	A3SS	0.33	50	50	ENSMUST00000101551.10	ENSMUSG00000052593.17	Adam17	chr12	protein_coding	a disintegrin and metallopeptidase domain 17
chr12	21379133	21379237	-	21379133	21380034	A5SS	0.5	50	50	ENSMUST00000101551.10	ENSMUSG00000052593.17	Adam17	chr12	protein_coding	a disintegrin and metallopeptidase domain 17
chr12	21397431	21399786	-	21392978	21399786	A3SS	0.33	50	50	ENSMUST00000232526.2	ENSMUSG00000052593.17	Adam17	chr12	protein_coding	a disintegrin and metallopeptidase domain 17
chr12	21397450	21399786	-	21392978	21399786	A3SS	0.33	50	50	ENSMUST00000232526.2	ENSMUSG00000052593.17	Adam17	chr12	protein_coding	a disintegrin and metallopeptidase domain 17
chr12	21392978	21395622	-	21392978	21399786	A5SS	0.5	50	50	ENSMUST00000232526.2	ENSMUSG00000052593.17	Adam17	chr12	protein_coding	a disintegrin and metallopeptidase domain 17
chr12	21404014	21405609	-	21404014	21423337	A5SS	0.33	50	50	ENSMUST00000232526.2	ENSMUSG00000052593.17	Adam17	chr12	protein_coding	a disintegrin and metallopeptidase domain 17
chr12	21441416;21441800	21441718;21444966	-	21441416	21444966	cassetteExon	0.5	100	100	ENSMUST00000135088.9	ENSMUSG00000076432.14	Ywhaq	chr12	protein_coding	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta
chr12	21445652	21446283	-	21445061	21446283	A3SS	0.5	50	50	ENSMUST00000135088.9	ENSMUSG00000076432.14	Ywhaq	chr12	protein_coding	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta
chr12	21468835	21470867	+	21468835	21469000	3pMXE	0.5	50	50	ENSMUST00000226239.2	ENSMUSG00000097055.3	Gm4419	chr12	lncRNA	predicted gene 4419
chr12	21468016	21468217	+	21468083	21468217	A5SS	0.5	50	50	ENSMUST00000226239.2	ENSMUSG00000097055.3	Gm4419	chr12	lncRNA	predicted gene 4419
chr12	21468016	21468631	+	21468291	21468631	A5SS&ES	0.5	50	50	ENSMUST00000226239.2	ENSMUSG00000097055.3	Gm4419	chr12	lncRNA	predicted gene 4419
chr12	21468016	21470867	+	21468016	21468631	3pMXE	0.33	50	50	ENSMUST00000227593.2	ENSMUSG00000097055.3	Gm4419	chr12	lncRNA	predicted gene 4419
chr12	21468016;21468291	21468217;21468631	+	21468016	21468631	cassetteExon	0.5	100	100	ENSMUST00000227593.2	ENSMUSG00000097055.3	Gm4419	chr12	lncRNA	predicted gene 4419
chr12	21468016;21468835	21468631;21470867	+	21468016	21470867	cassetteExon	0.5	100	100	ENSMUST00000226397.2	ENSMUSG00000097055.3	Gm4419	chr12	lncRNA	predicted gene 4419
chr12	21468016	21468217	+	21468016	21470867	A3SS	0.33	50	50	ENSMUST00000226397.2	ENSMUSG00000097055.3	Gm4419	chr12	lncRNA	predicted gene 4419
chr12	21595382	21599868	+	21595400	21599868	A5SS	0.5	50	50	ENSMUST00000210709.2	ENSMUSG00000109975.2	Gm19196	chr12	transcribed_unprocessed_pseudogene	predicted gene, 19196
chr12	21599955;21604107	21604010;21604378	+	21599955	21604378	cassetteExon	0.5	100	100	ENSMUST00000211164.2	ENSMUSG00000109975.2	Gm19196	chr12	transcribed_unprocessed_pseudogene	predicted gene, 19196
chr12	22637636	22672963	-	22637636;22646568	22646430;22672963	ES	0.5	50	50	ENSMUST00000223403.2	ENSMUSG00000113123.3	Gm40864	chr12	lncRNA	predicted gene, 40864
chr12	23008458	23042789	-	23008458	23009857	5pMXE	0.5	50	50	ENSMUST00000222206.2	ENSMUSG00000113670.2	Gm49686	chr12	transcribed_unprocessed_pseudogene	predicted gene, 49686
chr12	23008458;23010255	23009857;23042789	-	23008458	23042789	cassetteExon	0.5	100	100	ENSMUST00000135421.8	ENSMUSG00000073164.12	2410018L13Rik	chr12	lncRNA	RIKEN cDNA 2410018L13 gene
chr12	23042849;23043178	23043052;23059846	-	23042849	23059846	cassetteExon	0.5	100	100	ENSMUST00000135421.8	ENSMUSG00000073164.12	2410018L13Rik	chr12	lncRNA	RIKEN cDNA 2410018L13 gene
chr12	23033186	23042789	-	23008458	23042789	A3SS	0.33	50	50	ENSMUST00000135421.8	ENSMUSG00000073164.12	2410018L13Rik	chr12	lncRNA	RIKEN cDNA 2410018L13 gene
chr12	23008458	23042789	-	23010255	23042789	A3SS	0.33	50	50	ENSMUST00000149246.8	ENSMUSG00000073164.12	2410018L13Rik	chr12	lncRNA	RIKEN cDNA 2410018L13 gene
chr12	23033186	23042789	-	23010255	23042789	A3SS	0.33	50	50	ENSMUST00000149246.8	ENSMUSG00000073164.12	2410018L13Rik	chr12	lncRNA	RIKEN cDNA 2410018L13 gene
chr12	23618619	23622083	-	23591939	23622083	A3SS	0.5	50	50	ENSMUST00000220772.2	ENSMUSG00000095564.3	Gm20474	chr12	transcribed_unprocessed_pseudogene	predicted gene 20474
chr12	24555033	24559453	+	24555033;24559180	24559083;24559453	ES	0.5	50	50	ENSMUST00000075954.9	ENSMUSG00000059669.9	Taf1b	chr12	protein_coding	TATA-box binding protein associated factor, RNA polymerase I, B
chr12	24636149	24644892	+	24636149	24652907	A3SS	0.5	50	50	ENSMUST00000085553.13	ENSMUSG00000020656.17	Grhl1	chr12	protein_coding	grainyhead like transcription factor 1
chr12	24630779	24631327	+	24628089	24631327	A5SS	0.5	50	50	ENSMUST00000085553.13	ENSMUSG00000020656.17	Grhl1	chr12	protein_coding	grainyhead like transcription factor 1
chr12	24702009	24703558	+	24701565	24703558	A5SS	0.25	50	50	ENSMUST00000020982.7	ENSMUSG00000020653.13	Klf11	chr12	protein_coding	Kruppel-like factor 11
chr12	24702022	24703558	+	24701565	24703558	A5SS	0.25	50	50	ENSMUST00000020982.7	ENSMUSG00000020653.13	Klf11	chr12	protein_coding	Kruppel-like factor 11
chr12	24702278	24703558	+	24701565	24703558	A5SS	0.25	50	50	ENSMUST00000020982.7	ENSMUSG00000020653.13	Klf11	chr12	protein_coding	Kruppel-like factor 11
chr12	24702009	24703558	+	24702022	24703558	A5SS	0.25	50	50	ENSMUST00000139940.2	ENSMUSG00000020653.13	Klf11	chr12	protein_coding	Kruppel-like factor 11
chr12	24702278	24703558	+	24702022	24703558	A5SS	0.25	50	50	ENSMUST00000139940.2	ENSMUSG00000020653.13	Klf11	chr12	protein_coding	Kruppel-like factor 11
chr12	24702278	24703558	+	24702009	24703558	A5SS	0.25	50	50	ENSMUST00000146894.8	ENSMUSG00000020653.13	Klf11	chr12	protein_coding	Kruppel-like factor 11
chr12	24718708	24719697	-	24717231	24719697	A3SS	0.5	50	50	ENSMUST00000156453.10	ENSMUSG00000062563.16	Cys1	chr12	protein_coding	cystin 1
chr12	24719749	24729889	-	24719749	24730629	A5SS	0.5	50	50	ENSMUST00000156453.10	ENSMUSG00000062563.16	Cys1	chr12	protein_coding	cystin 1
chr12	24716180	24716766	-	24716251	24716766	A3SS	0.33	50	50	ENSMUST00000074163.13	ENSMUSG00000062563.16	Cys1	chr12	protein_coding	cystin 1
chr12	24716220	24716766	-	24716251	24716766	A3SS	0.33	50	50	ENSMUST00000074163.13	ENSMUSG00000062563.16	Cys1	chr12	protein_coding	cystin 1
chr12	24716220	24716766	-	24716180	24716766	A3SS	0.33	50	50	ENSMUST00000186602.7	ENSMUSG00000062563.16	Cys1	chr12	protein_coding	cystin 1
chr12	24761801	24762932	+	24761801	24762660	A3SS&ES	0.5	50	50	ENSMUST00000020980.12	ENSMUSG00000020649.12	Rrm2	chr12	protein_coding	ribonucleotide reductase M2
chr12	24932793;24984621	24984566;24989293	+	24932793;24974293	24974198;24989293	MXE	0.5	100	100	ENSMUST00000222198.2	ENSMUSG00000020646.18	Mboat2	chr12	protein_coding	membrane bound O-acyltransferase domain containing 2
chr12	24974293;24984621	24984566;24989293	+	24974293	24989293	cassetteExon	0.5	100	100	ENSMUST00000222198.2	ENSMUSG00000020646.18	Mboat2	chr12	protein_coding	membrane bound O-acyltransferase domain containing 2
chr12	24881773	24928190	+	24880984	24928190	A5SS	0.5	50	50	ENSMUST00000222198.2	ENSMUSG00000020646.18	Mboat2	chr12	protein_coding	membrane bound O-acyltransferase domain containing 2
chr12	24881773	24974198	+	24932793	24974198	A5SS&ES	0.5	50	50	ENSMUST00000222198.2	ENSMUSG00000020646.18	Mboat2	chr12	protein_coding	membrane bound O-acyltransferase domain containing 2
chr12	24881773;24974293	24974198;24984566	+	24881773;24932793	24928190;24984566	MXE	0.5	100	100	ENSMUST00000221952.2	ENSMUSG00000020646.18	Mboat2	chr12	protein_coding	membrane bound O-acyltransferase domain containing 2
chr12	24881773;24974293	24974198;24989293	+	24881773;24984621	24928190;24989293	MXE	0.5	100	100	ENSMUST00000221952.2	ENSMUSG00000020646.18	Mboat2	chr12	protein_coding	membrane bound O-acyltransferase domain containing 2
chr12	24932793;24974293	24974198;24984566	+	24932793	24984566	cassetteExon	0.5	100	100	ENSMUST00000221952.2	ENSMUSG00000020646.18	Mboat2	chr12	protein_coding	membrane bound O-acyltransferase domain containing 2
chr12	24881773	24984566	+	24881773	24974198	3pMXE	0.33	50	50	ENSMUST00000220497.2	ENSMUSG00000020646.18	Mboat2	chr12	protein_coding	membrane bound O-acyltransferase domain containing 2
chr12	24881773	24928190	+	24881773	24974198	A3SS	0.33	50	50	ENSMUST00000220497.2	ENSMUSG00000020646.18	Mboat2	chr12	protein_coding	membrane bound O-acyltransferase domain containing 2
chr12	24881773;24974293	24974198;24984566	+	24881773	24984566	cassetteExon	0.5	100	100	ENSMUST00000078902.8	ENSMUSG00000020646.18	Mboat2	chr12	protein_coding	membrane bound O-acyltransferase domain containing 2
chr12	24881773;24974293	24974198;24989293	+	24881773;24984621	24984566;24989293	MXE	0.5	100	100	ENSMUST00000078902.8	ENSMUSG00000020646.18	Mboat2	chr12	protein_coding	membrane bound O-acyltransferase domain containing 2
chr12	24881773	24928190	+	24881773	24984566	A3SS	0.33	50	50	ENSMUST00000078902.8	ENSMUSG00000020646.18	Mboat2	chr12	protein_coding	membrane bound O-acyltransferase domain containing 2
chr12	24932793	24984566	+	24881773	24984566	A5SS	0.33	50	50	ENSMUST00000078902.8	ENSMUSG00000020646.18	Mboat2	chr12	protein_coding	membrane bound O-acyltransferase domain containing 2
chr12	25091301	25097893	+	25091301;25096234	25096202;25097893	ES	0.33	50	50	ENSMUST00000066652.7	ENSMUSG00000036333.12	Kidins220	chr12	protein_coding	kinase D-interacting substrate 220
chr12	25104033	25111217	+	25104033	25106581	3pMXE	0.5	50	50	ENSMUST00000066652.7	ENSMUSG00000036333.12	Kidins220	chr12	protein_coding	kinase D-interacting substrate 220
chr12	25025061	25032312	+	25025061	25032236	A3SS	0.5	50	50	ENSMUST00000066652.7	ENSMUSG00000036333.12	Kidins220	chr12	protein_coding	kinase D-interacting substrate 220
chr12	25068754	25086453	+	25067051	25086453	A5SS	0.5	50	50	ENSMUST00000066652.7	ENSMUSG00000036333.12	Kidins220	chr12	protein_coding	kinase D-interacting substrate 220
chr12	25088549;25090568	25090455;25101094	+	25088549	25101094	cassetteExon	0.5	100	100	ENSMUST00000220459.2	ENSMUSG00000036333.12	Kidins220	chr12	protein_coding	kinase D-interacting substrate 220
chr12	25097925	25101094	+	25088549	25101094	A5SS	0.33	50	50	ENSMUST00000220459.2	ENSMUSG00000036333.12	Kidins220	chr12	protein_coding	kinase D-interacting substrate 220
chr12	25090568	25101094	+	25090568;25097925	25097893;25101094	ES	0.33	50	50	ENSMUST00000222941.2	ENSMUSG00000036333.12	Kidins220	chr12	protein_coding	kinase D-interacting substrate 220
chr12	25090568;25091301	25091245;25097893	+	25090568	25097893	cassetteExon	0.5	100	100	ENSMUST00000222941.2	ENSMUSG00000036333.12	Kidins220	chr12	protein_coding	kinase D-interacting substrate 220
chr12	25096234	25097893	+	25090568	25097893	A5SS	0.33	50	50	ENSMUST00000222941.2	ENSMUSG00000036333.12	Kidins220	chr12	protein_coding	kinase D-interacting substrate 220
chr12	25104033;25106661	25106581;25111217	+	25104033	25111217	cassetteExon	0.5	100	100	ENSMUST00000222013.2	ENSMUSG00000036333.12	Kidins220	chr12	protein_coding	kinase D-interacting substrate 220
chr12	25090568	25091245	+	25090568	25101094	A3SS	0.33	50	50	ENSMUST00000222013.2	ENSMUSG00000036333.12	Kidins220	chr12	protein_coding	kinase D-interacting substrate 220
chr12	25354576	25360220	+	25354576	25405936	A3SS	0.33	50	50	ENSMUST00000220620.2	ENSMUSG00000113669.2	Gm36723	chr12	lncRNA	predicted gene, 36723
chr12	25354576	25360356	+	25354576	25405936	A3SS	0.33	50	50	ENSMUST00000220620.2	ENSMUSG00000113669.2	Gm36723	chr12	lncRNA	predicted gene, 36723
chr12	25369455	25426908	+	25405987	25426908	A5SS&ES	0.5	50	50	ENSMUST00000220620.2	ENSMUSG00000113669.2	Gm36723	chr12	lncRNA	predicted gene, 36723
chr12	25354576	25360220	+	25354576	25360356	A3SS	0.33	50	50	ENSMUST00000221460.2	ENSMUSG00000113669.2	Gm36723	chr12	lncRNA	predicted gene, 36723
chr12	25445948	25446927	+	25443511	25446927	A5SS	0.5	50	50	ENSMUST00000221460.2	ENSMUSG00000113669.2	Gm36723	chr12	lncRNA	predicted gene, 36723
chr12	25369455	25426908	+	25369455	25394569	3pMXE	0.5	50	50	ENSMUST00000222356.2	ENSMUSG00000113669.2	Gm36723	chr12	lncRNA	predicted gene, 36723
chr12	25366454	25369302	+	25368339	25369302	A5SS&ES	0.5	50	50	ENSMUST00000222356.2	ENSMUSG00000113669.2	Gm36723	chr12	lncRNA	predicted gene, 36723
chr12	25432466	25435211	+	25427000	25435211	A5SS	0.5	50	50	ENSMUST00000222226.2	ENSMUSG00000113669.2	Gm36723	chr12	lncRNA	predicted gene, 36723
chr12	25445948	25448156	+	25445948;25447117	25446927;25448156	ES	0.5	50	50	ENSMUST00000223262.2	ENSMUSG00000113669.2	Gm36723	chr12	lncRNA	predicted gene, 36723
chr12	25368339	25369302	+	25368339	25444753	A3SS	0.5	50	50	ENSMUST00000223262.2	ENSMUSG00000113669.2	Gm36723	chr12	lncRNA	predicted gene, 36723
chr12	26357711	26360112	-	26351139	26360112	A3SS	0.5	50	50	ENSMUST00000223137.2	ENSMUSG00000020642.14	Rnf144a	chr12	protein_coding	ring finger protein 144A
chr12	26439574	26465100	-	26439574;26455391	26455318;26465100	ES	0.33	50	50	ENSMUST00000020971.14	ENSMUSG00000020642.14	Rnf144a	chr12	protein_coding	ring finger protein 144A
chr12	26439574;26463830	26463763;26465100	-	26439574;26455391	26455318;26465100	MXE	0.5	100	100	ENSMUST00000020971.14	ENSMUSG00000020642.14	Rnf144a	chr12	protein_coding	ring finger protein 144A
chr12	26455391;26463830	26463763;26465100	-	26455391	26465100	cassetteExon	0.5	100	100	ENSMUST00000020971.14	ENSMUSG00000020642.14	Rnf144a	chr12	protein_coding	ring finger protein 144A
chr12	26439574;26463830	26463763;26465100	-	26439574	26465100	cassetteExon	0.5	100	100	ENSMUST00000062149.6	ENSMUSG00000020642.14	Rnf144a	chr12	protein_coding	ring finger protein 144A
chr12	26439574	26463763	-	26439574;26455391	26455318;26463763	ES	0.5	50	50	ENSMUST00000222082.2	ENSMUSG00000020642.14	Rnf144a	chr12	protein_coding	ring finger protein 144A
chr12	26439574	26465100	-	26439574	26463763	5pMXE	0.33	50	50	ENSMUST00000222505.2	ENSMUSG00000020642.14	Rnf144a	chr12	protein_coding	ring finger protein 144A
chr12	26500774;26502406	26501972;26504017	-	26500774	26504017	cassetteExon	0.5	100	100	ENSMUST00000020970.10	ENSMUSG00000020641.17	Rsad2	chr12	protein_coding	radical S-adenosyl methionine domain containing 2
chr12	26504178	26504724	-	26504178	26506070	A5SS	0.5	50	50	ENSMUST00000020970.10	ENSMUSG00000020641.17	Rsad2	chr12	protein_coding	radical S-adenosyl methionine domain containing 2
chr12	26521176	26521405	+	26520025	26521405	A5SS	0.5	50	50	ENSMUST00000020969.5	ENSMUSG00000020638.9	Cmpk2	chr12	protein_coding	cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial
chr12	26870364	26870495	-	26864937	26870495	A3SS	0.5	50	50	ENSMUST00000221910.2	ENSMUSG00000113218.2	4933409F18Rik	chr12	lncRNA	RIKEN cDNA 4933409F18 gene
chr12	27146910;27152487	27152280;27210229	-	27146910	27210229	cassetteExon	0.5	100	100	ENSMUST00000222954.2	ENSMUSG00000094002.4	Gm9866	chr12	lncRNA	predicted gene 9866
chr12	27141515	27146716	-	27118693	27146716	A3SS	0.5	50	50	ENSMUST00000222954.2	ENSMUSG00000094002.4	Gm9866	chr12	lncRNA	predicted gene 9866
chr12	27192161	27210229	-	27146910	27210229	A3SS	0.2	50	50	ENSMUST00000222954.2	ENSMUSG00000094002.4	Gm9866	chr12	lncRNA	predicted gene 9866
chr12	27203604	27210229	-	27146910	27210229	A3SS	0.2	50	50	ENSMUST00000222954.2	ENSMUSG00000094002.4	Gm9866	chr12	lncRNA	predicted gene 9866
chr12	27209260	27210229	-	27146910	27210229	A3SS	0.2	50	50	ENSMUST00000222954.2	ENSMUSG00000094002.4	Gm9866	chr12	lncRNA	predicted gene 9866
chr12	27146910	27164497	-	27146910	27210229	A5SS	0.33	50	50	ENSMUST00000222954.2	ENSMUSG00000094002.4	Gm9866	chr12	lncRNA	predicted gene 9866
chr12	27192161	27210229	-	27152487	27210229	A3SS	0.2	50	50	ENSMUST00000222838.2	ENSMUSG00000094002.4	Gm9866	chr12	lncRNA	predicted gene 9866
chr12	27203604	27210229	-	27152487	27210229	A3SS	0.2	50	50	ENSMUST00000222838.2	ENSMUSG00000094002.4	Gm9866	chr12	lncRNA	predicted gene 9866
chr12	27209260	27210229	-	27152487	27210229	A3SS	0.2	50	50	ENSMUST00000222838.2	ENSMUSG00000094002.4	Gm9866	chr12	lncRNA	predicted gene 9866
chr12	27146910	27164497	-	27146910	27152280	A5SS&ES	0.33	50	50	ENSMUST00000222838.2	ENSMUSG00000094002.4	Gm9866	chr12	lncRNA	predicted gene 9866
chr12	27203604	27210229	-	27192161	27210229	A3SS	0.2	50	50	ENSMUST00000182592.3	ENSMUSG00000094002.4	Gm9866	chr12	lncRNA	predicted gene 9866
chr12	27209260	27210229	-	27192161	27210229	A3SS	0.2	50	50	ENSMUST00000182592.3	ENSMUSG00000094002.4	Gm9866	chr12	lncRNA	predicted gene 9866
chr12	27192161	27192574	-	27192161	27210229	A5SS	0.5	50	50	ENSMUST00000182592.3	ENSMUSG00000094002.4	Gm9866	chr12	lncRNA	predicted gene 9866
chr12	27195414	27203316	-	27192717	27203316	A3SS	0.5	50	50	ENSMUST00000182473.2	ENSMUSG00000094002.4	Gm9866	chr12	lncRNA	predicted gene 9866
chr12	27209260	27210229	-	27203604	27210229	A3SS	0.33	50	50	ENSMUST00000182473.2	ENSMUSG00000094002.4	Gm9866	chr12	lncRNA	predicted gene 9866
chr12	28372062	28389153	-	28300079	28389153	A3SS	0.5	50	50	ENSMUST00000222662.2	ENSMUSG00000113235.2	Gm47872	chr12	lncRNA	predicted gene, 47872
chr12	28300079	28349580	-	28300079	28389153	A5SS	0.5	50	50	ENSMUST00000222662.2	ENSMUSG00000113235.2	Gm47872	chr12	lncRNA	predicted gene, 47872
chr12	28597261	28602016	-	28597261	28598236	5pMXE	0.5	50	50	ENSMUST00000189735.7	ENSMUSG00000020633.15	Dcdc2c	chr12	protein_coding	doublecortin domain containing 2C
chr12	28585579;28591547	28591471;28597210	-	28585579	28597210	cassetteExon	0.5	100	100	ENSMUST00000189735.7	ENSMUSG00000020633.15	Dcdc2c	chr12	protein_coding	doublecortin domain containing 2C
chr12	28535258	28566646	-	28488470	28566646	A3SS	0.2	50	50	ENSMUST00000189735.7	ENSMUSG00000020633.15	Dcdc2c	chr12	protein_coding	doublecortin domain containing 2C
chr12	28561006	28566646	-	28488470	28566646	A3SS	0.2	50	50	ENSMUST00000189735.7	ENSMUSG00000020633.15	Dcdc2c	chr12	protein_coding	doublecortin domain containing 2C
chr12	28566173	28566646	-	28488470	28566646	A3SS	0.2	50	50	ENSMUST00000189735.7	ENSMUSG00000020633.15	Dcdc2c	chr12	protein_coding	doublecortin domain containing 2C
chr12	28566303	28566646	-	28488470	28566646	A3SS	0.2	50	50	ENSMUST00000189735.7	ENSMUSG00000020633.15	Dcdc2c	chr12	protein_coding	doublecortin domain containing 2C
chr12	28574771	28576691	-	28574774	28576691	A3SS	0.5	50	50	ENSMUST00000189735.7	ENSMUSG00000020633.15	Dcdc2c	chr12	protein_coding	doublecortin domain containing 2C
chr12	28524224;28561006	28560965;28566646	-	28524224;28535258	28530889;28566646	MXE	0.5	100	100	ENSMUST00000185916.3	ENSMUSG00000020633.15	Dcdc2c	chr12	protein_coding	doublecortin domain containing 2C
chr12	28566173	28566646	-	28535258	28566646	A3SS	0.25	50	50	ENSMUST00000185916.3	ENSMUSG00000020633.15	Dcdc2c	chr12	protein_coding	doublecortin domain containing 2C
chr12	28566303	28566646	-	28535258	28566646	A3SS	0.25	50	50	ENSMUST00000185916.3	ENSMUSG00000020633.15	Dcdc2c	chr12	protein_coding	doublecortin domain containing 2C
chr12	28535258	28566646	-	28561006	28566646	A3SS&ES	0.25	50	50	ENSMUST00000221349.2	ENSMUSG00000020633.15	Dcdc2c	chr12	protein_coding	doublecortin domain containing 2C
chr12	28560672	28560965	-	28524224	28560965	A3SS	0.5	50	50	ENSMUST00000221349.2	ENSMUSG00000020633.15	Dcdc2c	chr12	protein_coding	doublecortin domain containing 2C
chr12	28566173	28566646	-	28561006	28566646	A3SS	0.25	50	50	ENSMUST00000221349.2	ENSMUSG00000020633.15	Dcdc2c	chr12	protein_coding	doublecortin domain containing 2C
chr12	28566303	28566646	-	28561006	28566646	A3SS	0.25	50	50	ENSMUST00000221349.2	ENSMUSG00000020633.15	Dcdc2c	chr12	protein_coding	doublecortin domain containing 2C
chr12	28524224	28530889	-	28524224	28560965	A5SS	0.5	50	50	ENSMUST00000221349.2	ENSMUSG00000020633.15	Dcdc2c	chr12	protein_coding	doublecortin domain containing 2C
chr12	28566303	28566646	-	28566173	28566646	A3SS	0.2	50	50	ENSMUST00000189747.2	ENSMUSG00000020633.15	Dcdc2c	chr12	protein_coding	doublecortin domain containing 2C
chr12	28623378	28632464	-	28623270	28632464	A3SS	0.5	50	50	ENSMUST00000110917.2	ENSMUSG00000020636.15	Allc	chr12	protein_coding	allantoicase
chr12	28649114;28653352	28653220;28662862	-	28649114	28662862	cassetteExon	0.5	100	100	ENSMUST00000036136.9	ENSMUSG00000036655.9	Colec11	chr12	protein_coding	collectin sub-family member 11
chr12	28645065	28645243	-	28645047	28645243	A3SS	0.5	50	50	ENSMUST00000036136.9	ENSMUSG00000036655.9	Colec11	chr12	protein_coding	collectin sub-family member 11
chr12	28681773	28682280	-	28681773	28683767	A5SS	0.5	50	50	ENSMUST00000074267.5	ENSMUSG00000061477.5	Rps7	chr12	protein_coding	ribosomal protein S7
chr12	28705683	28707636	+	28705683	28707271	A3SS&ES	0.5	50	50	ENSMUST00000020959.9	ENSMUSG00000020630.10	Rnaseh1	chr12	protein_coding	ribonuclease H1
chr12	28704662	28705584	+	28703223	28705584	A5SS	0.5	50	50	ENSMUST00000020959.9	ENSMUSG00000020630.10	Rnaseh1	chr12	protein_coding	ribonuclease H1
chr12	28725548	28727777	+	28725371	28727777	A5SS	0.5	50	50	ENSMUST00000020957.13	ENSMUSG00000020629.13	Adi1	chr12	protein_coding	acireductone dioxygenase 1
chr12	28751135	28751535	-	28747241	28751535	A3SS	0.5	50	50	ENSMUST00000168129.10	ENSMUSG00000020628.17	Trappc12	chr12	protein_coding	trafficking protein particle complex 12
chr12	28760386	28761871	-	28753597	28761871	A3SS	0.5	50	50	ENSMUST00000168129.10	ENSMUSG00000020628.17	Trappc12	chr12	protein_coding	trafficking protein particle complex 12
chr12	28797535	28800161	-	28797535	28800328	A5SS	0.5	50	50	ENSMUST00000168129.10	ENSMUSG00000020628.17	Trappc12	chr12	protein_coding	trafficking protein particle complex 12
chr12	28816903	28897556	+	28816903;28878863	28878707;28897556	ES	0.5	50	50	ENSMUST00000221877.2	ENSMUSG00000036613.9	Eipr1	chr12	protein_coding	EARP complex and GARP complex interacting protein 1
chr12	28897655	28912954	+	28897655;28909387	28909251;28912954	ES	0.5	50	50	ENSMUST00000221877.2	ENSMUSG00000036613.9	Eipr1	chr12	protein_coding	EARP complex and GARP complex interacting protein 1
chr12	28816903;28843935	28843854;28878707	+	28816903	28878707	cassetteExon	0.5	100	100	ENSMUST00000221877.2	ENSMUSG00000036613.9	Eipr1	chr12	protein_coding	EARP complex and GARP complex interacting protein 1
chr12	28802003	28802419	+	28802003	28810069	A3SS	0.5	50	50	ENSMUST00000221877.2	ENSMUSG00000036613.9	Eipr1	chr12	protein_coding	EARP complex and GARP complex interacting protein 1
chr12	28907390	28909251	+	28897655	28909251	A5SS	0.5	50	50	ENSMUST00000221877.2	ENSMUSG00000036613.9	Eipr1	chr12	protein_coding	EARP complex and GARP complex interacting protein 1
chr12	28913648	28914669	+	28913121	28914669	A5SS	0.5	50	50	ENSMUST00000221877.2	ENSMUSG00000036613.9	Eipr1	chr12	protein_coding	EARP complex and GARP complex interacting protein 1
chr12	28816903	28843854	+	28816903	28897556	A3SS	0.33	50	50	ENSMUST00000221555.2	ENSMUSG00000036613.9	Eipr1	chr12	protein_coding	EARP complex and GARP complex interacting protein 1
chr12	29156451	29156675	-	29156451	29156558	A5SS	0.5	50	50	ENSMUST00000222639.2	ENSMUSG00000113544.2	4833405L11Rik	chr12	lncRNA	RIKEN cDNA 4833405L11 gene
chr12	29213846	29216191	+	29213846;29214909	29214760;29216191	ES	0.5	50	50	ENSMUST00000220554.2	ENSMUSG00000113986.2	Gm31333	chr12	lncRNA	predicted gene, 31333
chr12	29216315	29218118	+	29216315	29247865	A3SS	0.5	50	50	ENSMUST00000222225.2	ENSMUSG00000113986.2	Gm31333	chr12	lncRNA	predicted gene, 31333
chr12	29577822	29578065	-	29577822	29584693	A5SS	0.5	50	50	ENSMUST00000218104.2	ENSMUSG00000112390.2	Gm20208	chr12	lncRNA	predicted gene, 20208
chr12	29970037	29971068	+	29970037	29970340	3pMXE	0.5	50	50	ENSMUST00000218583.2	ENSMUSG00000061911.16	Myt1l	chr12	protein_coding	myelin transcription factor 1-like
chr12	29905282	29906144	+	29905282	29936122	A3SS	0.33	50	50	ENSMUST00000218583.2	ENSMUSG00000061911.16	Myt1l	chr12	protein_coding	myelin transcription factor 1-like
chr12	29905282	29928881	+	29905282	29936122	A3SS	0.33	50	50	ENSMUST00000218583.2	ENSMUSG00000061911.16	Myt1l	chr12	protein_coding	myelin transcription factor 1-like
chr12	29583534	29616701	+	29578795	29616701	A5SS	0.2	50	50	ENSMUST00000218583.2	ENSMUSG00000061911.16	Myt1l	chr12	protein_coding	myelin transcription factor 1-like
chr12	29584793	29616701	+	29578795	29616701	A5SS	0.2	50	50	ENSMUST00000218583.2	ENSMUSG00000061911.16	Myt1l	chr12	protein_coding	myelin transcription factor 1-like
chr12	29585228	29616701	+	29578795	29616701	A5SS	0.2	50	50	ENSMUST00000218583.2	ENSMUSG00000061911.16	Myt1l	chr12	protein_coding	myelin transcription factor 1-like
chr12	29585367	29616701	+	29578795	29616701	A5SS	0.2	50	50	ENSMUST00000218583.2	ENSMUSG00000061911.16	Myt1l	chr12	protein_coding	myelin transcription factor 1-like
chr12	29877836	29882287	+	29877830	29882287	A5SS	0.5	50	50	ENSMUST00000218583.2	ENSMUSG00000061911.16	Myt1l	chr12	protein_coding	myelin transcription factor 1-like
chr12	29890391	29892394	+	29888146	29892394	A5SS	0.5	50	50	ENSMUST00000218583.2	ENSMUSG00000061911.16	Myt1l	chr12	protein_coding	myelin transcription factor 1-like
chr12	29584793	29616701	+	29583534	29616701	A5SS	0.2	50	50	ENSMUST00000219899.2	ENSMUSG00000061911.16	Myt1l	chr12	protein_coding	myelin transcription factor 1-like
chr12	29585228	29616701	+	29583534	29616701	A5SS	0.2	50	50	ENSMUST00000219899.2	ENSMUSG00000061911.16	Myt1l	chr12	protein_coding	myelin transcription factor 1-like
chr12	29585367	29616701	+	29583534	29616701	A5SS	0.2	50	50	ENSMUST00000219899.2	ENSMUSG00000061911.16	Myt1l	chr12	protein_coding	myelin transcription factor 1-like
chr12	29585228	29616701	+	29584793	29616701	A5SS	0.2	50	50	ENSMUST00000219231.2	ENSMUSG00000061911.16	Myt1l	chr12	protein_coding	myelin transcription factor 1-like
chr12	29585367	29616701	+	29584793	29616701	A5SS	0.2	50	50	ENSMUST00000219231.2	ENSMUSG00000061911.16	Myt1l	chr12	protein_coding	myelin transcription factor 1-like
chr12	29585367	29616701	+	29585228	29616701	A5SS	0.2	50	50	ENSMUST00000021009.10	ENSMUSG00000061911.16	Myt1l	chr12	protein_coding	myelin transcription factor 1-like
chr12	29905282	29928881	+	29905282	29906144	3pMXE	0.33	50	50	ENSMUST00000218198.2	ENSMUSG00000061911.16	Myt1l	chr12	protein_coding	myelin transcription factor 1-like
chr12	30025561	30032293	+	30025561;30029310	30029239;30032293	ES	0.5	50	50	ENSMUST00000220271.2	ENSMUSG00000020674.18	Pxdn	chr12	protein_coding	peroxidasin
chr12	30049272;30049692	30049498;30049891	+	30049272	30049891	cassetteExon	0.5	100	100	ENSMUST00000220271.2	ENSMUSG00000020674.18	Pxdn	chr12	protein_coding	peroxidasin
chr12	29988323	30023992	+	29987665	30023992	A5SS	0.5	50	50	ENSMUST00000220271.2	ENSMUSG00000020674.18	Pxdn	chr12	protein_coding	peroxidasin
chr12	30050120	30051920	+	30050048	30051920	A5SS	0.5	50	50	ENSMUST00000220271.2	ENSMUSG00000020674.18	Pxdn	chr12	protein_coding	peroxidasin
chr12	30295246	30317030	-	30295246;30308092	30307965;30317030	ES	0.5	50	50	ENSMUST00000142046.8	ENSMUSG00000020672.15	Sntg2	chr12	protein_coding	syntrophin, gamma 2
chr12	30362672;30389856	30389743;30423157	-	30362672	30423157	cassetteExon	0.5	100	100	ENSMUST00000142046.8	ENSMUSG00000020672.15	Sntg2	chr12	protein_coding	syntrophin, gamma 2
chr12	30362672;30389868	30389743;30423157	-	30362672	30423157	cassetteExon	0.5	100	100	ENSMUST00000142046.8	ENSMUSG00000020672.15	Sntg2	chr12	protein_coding	syntrophin, gamma 2
chr12	30357359	30362535	-	30357377	30362535	A3SS	0.25	50	50	ENSMUST00000142046.8	ENSMUSG00000020672.15	Sntg2	chr12	protein_coding	syntrophin, gamma 2
chr12	30357382	30362535	-	30357377	30362535	A3SS	0.25	50	50	ENSMUST00000142046.8	ENSMUSG00000020672.15	Sntg2	chr12	protein_coding	syntrophin, gamma 2
chr12	30359727	30362535	-	30357377	30362535	A3SS	0.25	50	50	ENSMUST00000142046.8	ENSMUSG00000020672.15	Sntg2	chr12	protein_coding	syntrophin, gamma 2
chr12	30245647	30251274	-	30245647	30251285	A5SS	0.5	50	50	ENSMUST00000142046.8	ENSMUSG00000020672.15	Sntg2	chr12	protein_coding	syntrophin, gamma 2
chr12	30362672	30407650	-	30362672	30423157	A5SS	0.33	50	50	ENSMUST00000142046.8	ENSMUSG00000020672.15	Sntg2	chr12	protein_coding	syntrophin, gamma 2
chr12	30357359	30362535	-	30357382	30362535	A3SS	0.25	50	50	ENSMUST00000021004.14	ENSMUSG00000020672.15	Sntg2	chr12	protein_coding	syntrophin, gamma 2
chr12	30359727	30362535	-	30357382	30362535	A3SS	0.25	50	50	ENSMUST00000021004.14	ENSMUSG00000020672.15	Sntg2	chr12	protein_coding	syntrophin, gamma 2
chr12	30359727	30362535	-	30357359	30362535	A3SS	0.25	50	50	ENSMUST00000133324.8	ENSMUSG00000020672.15	Sntg2	chr12	protein_coding	syntrophin, gamma 2
chr12	30362672	30389743	-	30362672	30407650	A5SS	0.33	50	50	ENSMUST00000156953.8	ENSMUSG00000020672.15	Sntg2	chr12	protein_coding	syntrophin, gamma 2
chr12	30389856	30423157	-	30389868	30423157	A3SS	0.33	50	50	ENSMUST00000218723.2	ENSMUSG00000020672.15	Sntg2	chr12	protein_coding	syntrophin, gamma 2
chr12	30947805;30954830	30954717;30955068	-	30947805;30954982	30954869;30955068	MXE	0.5	100	100	ENSMUST00000062740.15	ENSMUSG00000044573.17	Acp1	chr12	protein_coding	acid phosphatase 1, soluble
chr12	30954830;30954982	30954921;30955068	-	30954830	30955068	cassetteExon	0.5	100	100	ENSMUST00000074038.7	ENSMUSG00000044573.17	Acp1	chr12	protein_coding	acid phosphatase 1, soluble
chr12	30954830	30955068	-	30954982	30955068	A3SS	0.5	50	50	ENSMUST00000219697.2	ENSMUSG00000044573.17	Acp1	chr12	protein_coding	acid phosphatase 1, soluble
chr12	30947805	30954869	-	30947805	30954717	A5SS	0.5	50	50	ENSMUST00000219697.2	ENSMUSG00000044573.17	Acp1	chr12	protein_coding	acid phosphatase 1, soluble
chr12	30972344	30976809	+	30972344;30974876	30974763;30976809	ES	0.5	50	50	ENSMUST00000142693.8	ENSMUSG00000020669.16	Sh3yl1	chr12	protein_coding	Sh3 domain YSC-like 1
chr12	30962226;30963100	30962956;30972234	+	30962226	30972234	cassetteExon	0.5	100	100	ENSMUST00000142693.8	ENSMUSG00000020669.16	Sh3yl1	chr12	protein_coding	Sh3 domain YSC-like 1
chr12	31221263	31234562	+	31221263	31223572	A3SS&ES	0.5	50	50	ENSMUST00000218642.3	ENSMUSG00000095953.4	6030469F06Rik	chr12	lncRNA	RIKEN cDNA 6030469F06 gene
chr12	31219138	31221204	+	31218166	31221204	A5SS	0.5	50	50	ENSMUST00000218642.3	ENSMUSG00000095953.4	6030469F06Rik	chr12	lncRNA	RIKEN cDNA 6030469F06 gene
chr12	31315578	31316690	+	31315600	31316690	A5SS	0.5	50	50	ENSMUST00000169088.8	ENSMUSG00000002900.18	Lamb1	chr12	protein_coding	laminin B1
chr12	31497228	31497779	+	31497228	31497729	A3SS	0.5	50	50	ENSMUST00000167432.8	ENSMUSG00000001225.13	Slc26a3	chr12	protein_coding	solute carrier family 26, member 3
chr12	31488340	31497009	+	31483238	31497009	A5SS	0.5	50	50	ENSMUST00000167432.8	ENSMUSG00000001225.13	Slc26a3	chr12	protein_coding	solute carrier family 26, member 3
chr12	31515853;31516629	31516396;31518520	+	31515853	31518520	cassetteExon	0.5	100	100	ENSMUST00000171616.8	ENSMUSG00000001225.13	Slc26a3	chr12	protein_coding	solute carrier family 26, member 3
chr12	31542175	31544590	-	31542178	31544590	A3SS	0.5	50	50	ENSMUST00000064240.14	ENSMUSG00000020659.17	Cbll1	chr12	protein_coding	Casitas B-lineage lymphoma-like 1
chr12	31542178	31544581	-	31542178	31544590	A5SS	0.5	50	50	ENSMUST00000064240.14	ENSMUSG00000020659.17	Cbll1	chr12	protein_coding	Casitas B-lineage lymphoma-like 1
chr12	31542178	31544581	-	31542175	31544581	A3SS	0.5	50	50	ENSMUST00000185739.8	ENSMUSG00000020659.17	Cbll1	chr12	protein_coding	Casitas B-lineage lymphoma-like 1
chr12	31542175	31544590	-	31542175	31544581	A5SS	0.5	50	50	ENSMUST00000185739.8	ENSMUSG00000020659.17	Cbll1	chr12	protein_coding	Casitas B-lineage lymphoma-like 1
chr12	31585912	31586539	-	31585912	31589182	A5SS	0.5	50	50	ENSMUST00000001253.8	ENSMUSG00000020651.9	Slc26a4	chr12	protein_coding	solute carrier family 26, member 4
chr12	31696737	31702290	-	31696737;31698886	31698765;31702290	ES	0.5	50	50	ENSMUST00000020977.4	ENSMUSG00000020648.4	Dus4l	chr12	protein_coding	dihydrouridine synthase 4-like (S. cerevisiae)
chr12	31760034	31763499	-	31760034;31762560	31761570;31763499	ES	0.5	50	50	ENSMUST00000057783.6	ENSMUSG00000044067.8	Gpr22	chr12	protein_coding	G protein-coupled receptor 22
chr12	31762560	31763499	-	31760034	31763499	A3SS	0.5	50	50	ENSMUST00000176710.2	ENSMUSG00000044067.8	Gpr22	chr12	protein_coding	G protein-coupled receptor 22
chr12	31760034	31761570	-	31760034	31763499	A5SS	0.5	50	50	ENSMUST00000176710.2	ENSMUSG00000044067.8	Gpr22	chr12	protein_coding	G protein-coupled receptor 22
chr12	31983030	31983356	-	31981004	31983356	A3SS	0.5	50	50	ENSMUST00000172314.9	ENSMUSG00000002996.18	Hbp1	chr12	protein_coding	high mobility group box transcription factor 1
chr12	31994011	31999574	-	31994011	32000195	A5SS	0.25	50	50	ENSMUST00000172314.9	ENSMUSG00000002996.18	Hbp1	chr12	protein_coding	high mobility group box transcription factor 1
chr12	31994011	32000104	-	31994011	32000195	A5SS	0.25	50	50	ENSMUST00000172314.9	ENSMUSG00000002996.18	Hbp1	chr12	protein_coding	high mobility group box transcription factor 1
chr12	31994011	32000130	-	31994011	32000195	A5SS	0.25	50	50	ENSMUST00000172314.9	ENSMUSG00000002996.18	Hbp1	chr12	protein_coding	high mobility group box transcription factor 1
chr12	31984440;31987280	31986971;31987617	-	31984440	31987617	cassetteExon	0.5	100	100	ENSMUST00000176643.8	ENSMUSG00000002996.18	Hbp1	chr12	protein_coding	high mobility group box transcription factor 1
chr12	31994011	32000104	-	31994011	31999574	5pMXE	0.25	50	50	ENSMUST00000175686.8	ENSMUSG00000002996.18	Hbp1	chr12	protein_coding	high mobility group box transcription factor 1
chr12	31994011	32000130	-	31994011	31999574	5pMXE	0.25	50	50	ENSMUST00000175686.8	ENSMUSG00000002996.18	Hbp1	chr12	protein_coding	high mobility group box transcription factor 1
chr12	31994011	32000104	-	31994011	32000130	A5SS	0.25	50	50	ENSMUST00000176520.8	ENSMUSG00000002996.18	Hbp1	chr12	protein_coding	high mobility group box transcription factor 1
chr12	32088656	32110315	-	32088656	32110781	A5SS	0.5	50	50	ENSMUST00000003079.12	ENSMUSG00000002997.16	Prkar2b	chr12	protein_coding	protein kinase, cAMP dependent regulatory, type II beta
chr12	32127577	32130780	-	32127577	32130720	A5SS	0.5	50	50	ENSMUST00000219954.3	ENSMUSG00000112569.3	Gm33111	chr12	lncRNA	predicted gene, 33111
chr12	32166206	32173621	-	32147606	32173621	A3SS	0.5	50	50	ENSMUST00000218145.2	ENSMUSG00000112071.2	5430401H09Rik	chr12	lncRNA	RIKEN cDNA 5430401H09 gene
chr12	32226855;32235461	32235431;32242079	-	32226855	32242079	cassetteExon	0.5	100	100	ENSMUST00000156904.8	ENSMUSG00000020573.18	Pik3cg	chr12	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma
chr12	32255997	32258150	-	32255997	32258517	A5SS	0.33	50	50	ENSMUST00000156904.8	ENSMUSG00000020573.18	Pik3cg	chr12	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma
chr12	32255997	32258161	-	32255997	32258517	A5SS	0.33	50	50	ENSMUST00000156904.8	ENSMUSG00000020573.18	Pik3cg	chr12	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma
chr12	32255997	32258161	-	32255997	32258150	A5SS	0.33	50	50	ENSMUST00000220366.2	ENSMUSG00000020573.18	Pik3cg	chr12	protein_coding	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma
chr12	32296715	32297718	+	32296389	32297718	A5SS	0.5	50	50	ENSMUST00000217784.2	ENSMUSG00000112578.2	Gm33308	chr12	lncRNA	predicted gene, 33308
chr12	32870625	32880166	+	32869961	32880166	A5SS	0.33	50	50	ENSMUST00000220200.2	ENSMUSG00000020572.9	Nampt	chr12	protein_coding	nicotinamide phosphoribosyltransferase
chr12	32870908	32880166	+	32869961	32880166	A5SS	0.33	50	50	ENSMUST00000220200.2	ENSMUSG00000020572.9	Nampt	chr12	protein_coding	nicotinamide phosphoribosyltransferase
chr12	32880252	32883031	+	32880322	32883031	A5SS	0.5	50	50	ENSMUST00000220200.2	ENSMUSG00000020572.9	Nampt	chr12	protein_coding	nicotinamide phosphoribosyltransferase
chr12	32870908	32880166	+	32870625	32880166	A5SS	0.33	50	50	ENSMUST00000020886.9	ENSMUSG00000020572.9	Nampt	chr12	protein_coding	nicotinamide phosphoribosyltransferase
chr12	32992397	33003197	-	32975534	33003197	A3SS	0.5	50	50	ENSMUST00000181670.8	ENSMUSG00000097494.8	4933406C10Rik	chr12	lncRNA	RIKEN cDNA 4933406C10 gene
chr12	32975534	32975631	-	32975534	33003197	A5SS	0.5	50	50	ENSMUST00000181670.8	ENSMUSG00000097494.8	4933406C10Rik	chr12	lncRNA	RIKEN cDNA 4933406C10 gene
chr12	33015499;33016620	33016449;33017535	+	33015499	33017535	cassetteExon	0.5	100	100	ENSMUST00000076698.13	ENSMUSG00000020570.16	Sypl	chr12	protein_coding	synaptophysin-like protein
chr12	33015499	33017635	+	33015499	33017535	A3SS	0.33	50	50	ENSMUST00000076698.13	ENSMUSG00000020570.16	Sypl	chr12	protein_coding	synaptophysin-like protein
chr12	33017742	33019180	+	33017742	33024127	A3SS	0.5	50	50	ENSMUST00000076698.13	ENSMUSG00000020570.16	Sypl	chr12	protein_coding	synaptophysin-like protein
chr12	33004981	33015372	+	33004358	33015372	A5SS	0.5	50	50	ENSMUST00000076698.13	ENSMUSG00000020570.16	Sypl	chr12	protein_coding	synaptophysin-like protein
chr12	33015499	33017635	+	33015499	33016449	A3SS&ES	0.33	50	50	ENSMUST00000122861.8	ENSMUSG00000020570.16	Sypl	chr12	protein_coding	synaptophysin-like protein
chr12	33101249	33102109	-	33101081	33102109	A3SS	0.5	50	50	ENSMUST00000095774.3	ENSMUSG00000035860.10	Cdhr3	chr12	protein_coding	cadherin-related family member 3
chr12	33186042;33189061	33188842;33189572	-	33186042	33189572	cassetteExon	0.5	100	100	ENSMUST00000140105.8	ENSMUSG00000052125.17	F730043M19Rik	chr12	lncRNA	RIKEN cDNA F730043M19 gene
chr12	33191115;33192734	33192637;33197131	-	33191115	33197131	cassetteExon	0.5	100	100	ENSMUST00000140105.8	ENSMUSG00000052125.17	F730043M19Rik	chr12	lncRNA	RIKEN cDNA F730043M19 gene
chr12	33176001	33185965	-	33169331	33185965	A3SS	0.25	50	50	ENSMUST00000140105.8	ENSMUSG00000052125.17	F730043M19Rik	chr12	lncRNA	RIKEN cDNA F730043M19 gene
chr12	33185358	33185965	-	33169331	33185965	A3SS	0.25	50	50	ENSMUST00000140105.8	ENSMUSG00000052125.17	F730043M19Rik	chr12	lncRNA	RIKEN cDNA F730043M19 gene
chr12	33185456	33185965	-	33169331	33185965	A3SS	0.25	50	50	ENSMUST00000140105.8	ENSMUSG00000052125.17	F730043M19Rik	chr12	lncRNA	RIKEN cDNA F730043M19 gene
chr12	33186042	33187888	-	33186042	33189572	A5SS	0.33	50	50	ENSMUST00000140105.8	ENSMUSG00000052125.17	F730043M19Rik	chr12	lncRNA	RIKEN cDNA F730043M19 gene
chr12	33191115	33196857	-	33191115	33197131	A5SS	0.33	50	50	ENSMUST00000140105.8	ENSMUSG00000052125.17	F730043M19Rik	chr12	lncRNA	RIKEN cDNA F730043M19 gene
chr12	33185358	33185965	-	33176001	33185965	A3SS	0.25	50	50	ENSMUST00000151637.8	ENSMUSG00000052125.17	F730043M19Rik	chr12	lncRNA	RIKEN cDNA F730043M19 gene
chr12	33185456	33185965	-	33176001	33185965	A3SS	0.25	50	50	ENSMUST00000151637.8	ENSMUSG00000052125.17	F730043M19Rik	chr12	lncRNA	RIKEN cDNA F730043M19 gene
chr12	33191115	33192637	-	33191115	33196857	A5SS	0.33	50	50	ENSMUST00000151637.8	ENSMUSG00000052125.17	F730043M19Rik	chr12	lncRNA	RIKEN cDNA F730043M19 gene
chr12	33185358	33185965	-	33185456	33185965	A3SS	0.25	50	50	ENSMUST00000148740.8	ENSMUSG00000052125.17	F730043M19Rik	chr12	lncRNA	RIKEN cDNA F730043M19 gene
chr12	33186042	33188842	-	33186042;33188038	33187888;33188842	ES	0.5	50	50	ENSMUST00000145769.8	ENSMUSG00000052125.17	F730043M19Rik	chr12	lncRNA	RIKEN cDNA F730043M19 gene
chr12	33267815	33361591	+	33267815	33299850	3pMXE	0.33	50	50	ENSMUST00000077456.13	ENSMUSG00000020564.18	Atxn7l1	chr12	protein_coding	ataxin 7-like 1
chr12	33267815	33375910	+	33267815	33299850	3pMXE	0.33	50	50	ENSMUST00000077456.13	ENSMUSG00000020564.18	Atxn7l1	chr12	protein_coding	ataxin 7-like 1
chr12	33197914;33198500	33198432;33267711	+	33197914	33267711	cassetteExon	0.5	100	100	ENSMUST00000077456.13	ENSMUSG00000020564.18	Atxn7l1	chr12	protein_coding	ataxin 7-like 1
chr12	33413093	33416971	+	33413093;33414689	33414384;33416971	ES	0.5	50	50	ENSMUST00000146040.9	ENSMUSG00000020564.18	Atxn7l1	chr12	protein_coding	ataxin 7-like 1
chr12	33267815;33361713	33361591;33375910	+	33267815	33375910	cassetteExon	0.5	100	100	ENSMUST00000146040.9	ENSMUSG00000020564.18	Atxn7l1	chr12	protein_coding	ataxin 7-like 1
chr12	33421056	33422867	+	33421056	33422864	A3SS	0.5	50	50	ENSMUST00000146040.9	ENSMUSG00000020564.18	Atxn7l1	chr12	protein_coding	ataxin 7-like 1
chr12	33352627	33375910	+	33267815	33375910	A5SS	0.16	50	50	ENSMUST00000146040.9	ENSMUSG00000020564.18	Atxn7l1	chr12	protein_coding	ataxin 7-like 1
chr12	33364390	33375910	+	33267815	33375910	A5SS	0.16	50	50	ENSMUST00000146040.9	ENSMUSG00000020564.18	Atxn7l1	chr12	protein_coding	ataxin 7-like 1
chr12	33364614	33375910	+	33267815	33375910	A5SS	0.16	50	50	ENSMUST00000146040.9	ENSMUSG00000020564.18	Atxn7l1	chr12	protein_coding	ataxin 7-like 1
chr12	33365478	33375910	+	33267815	33375910	A5SS	0.16	50	50	ENSMUST00000146040.9	ENSMUSG00000020564.18	Atxn7l1	chr12	protein_coding	ataxin 7-like 1
chr12	33417637	33420982	+	33417913	33420982	A5SS	0.5	50	50	ENSMUST00000146040.9	ENSMUSG00000020564.18	Atxn7l1	chr12	protein_coding	ataxin 7-like 1
chr12	33352627	33375910	+	33361713	33375910	A5SS&ES	0.16	50	50	ENSMUST00000130740.2	ENSMUSG00000020564.18	Atxn7l1	chr12	protein_coding	ataxin 7-like 1
chr12	33364390	33375910	+	33361713	33375910	A5SS	0.16	50	50	ENSMUST00000130740.2	ENSMUSG00000020564.18	Atxn7l1	chr12	protein_coding	ataxin 7-like 1
chr12	33364614	33375910	+	33361713	33375910	A5SS	0.16	50	50	ENSMUST00000130740.2	ENSMUSG00000020564.18	Atxn7l1	chr12	protein_coding	ataxin 7-like 1
chr12	33365478	33375910	+	33361713	33375910	A5SS	0.16	50	50	ENSMUST00000130740.2	ENSMUSG00000020564.18	Atxn7l1	chr12	protein_coding	ataxin 7-like 1
chr12	33364390	33375910	+	33352627	33375910	A5SS	0.16	50	50	ENSMUST00000090597.11	ENSMUSG00000020564.18	Atxn7l1	chr12	protein_coding	ataxin 7-like 1
chr12	33364614	33375910	+	33352627	33375910	A5SS	0.16	50	50	ENSMUST00000090597.11	ENSMUSG00000020564.18	Atxn7l1	chr12	protein_coding	ataxin 7-like 1
chr12	33365478	33375910	+	33352627	33375910	A5SS	0.16	50	50	ENSMUST00000090597.11	ENSMUSG00000020564.18	Atxn7l1	chr12	protein_coding	ataxin 7-like 1
chr12	33364614	33375910	+	33364390	33375910	A5SS	0.16	50	50	ENSMUST00000133549.8	ENSMUSG00000020564.18	Atxn7l1	chr12	protein_coding	ataxin 7-like 1
chr12	33365478	33375910	+	33364390	33375910	A5SS	0.16	50	50	ENSMUST00000133549.8	ENSMUSG00000020564.18	Atxn7l1	chr12	protein_coding	ataxin 7-like 1
chr12	33365478	33375910	+	33364614	33375910	A5SS	0.16	50	50	ENSMUST00000155386.2	ENSMUSG00000020564.18	Atxn7l1	chr12	protein_coding	ataxin 7-like 1
chr12	33479907;33483645	33483504;33486935	+	33479907	33486935	cassetteExon	0.5	100	100	ENSMUST00000219769.2	ENSMUSG00000020561.9	Polr1f	chr12	protein_coding	RNA polymerase I subunit F
chr12	33480193	33483504	+	33479907	33483504	A5SS	0.5	50	50	ENSMUST00000020877.9	ENSMUSG00000020561.9	Polr1f	chr12	protein_coding	RNA polymerase I subunit F
chr12	34362710	34439244	-	34362710;34424137	34423877;34439244	ES	0.5	50	50	ENSMUST00000209902.2	ENSMUSG00000004698.12	Hdac9	chr12	protein_coding	histone deacetylase 9
chr12	34452866	34479497	-	34452866;34457896	34457765;34479497	ES	0.5	50	50	ENSMUST00000209902.2	ENSMUSG00000004698.12	Hdac9	chr12	protein_coding	histone deacetylase 9
chr12	34157350;34218494	34218406;34219994	-	34157350	34219994	cassetteExon	0.5	100	100	ENSMUST00000209902.2	ENSMUSG00000004698.12	Hdac9	chr12	protein_coding	histone deacetylase 9
chr12	34483230	34487136	-	34483221	34487136	A3SS	0.5	50	50	ENSMUST00000209902.2	ENSMUSG00000004698.12	Hdac9	chr12	protein_coding	histone deacetylase 9
chr12	34578344	34578599	-	34578344	34877636	A5SS	0.33	50	50	ENSMUST00000211752.2	ENSMUSG00000004698.12	Hdac9	chr12	protein_coding	histone deacetylase 9
chr12	34578344	34668123	-	34578344	34877636	A5SS	0.33	50	50	ENSMUST00000211752.2	ENSMUSG00000004698.12	Hdac9	chr12	protein_coding	histone deacetylase 9
chr12	34877752	34911344	-	34877752	34964998	A5SS	0.33	50	50	ENSMUST00000211752.2	ENSMUSG00000004698.12	Hdac9	chr12	protein_coding	histone deacetylase 9
chr12	34877752	34956779	-	34877752	34964998	A5SS	0.33	50	50	ENSMUST00000211752.2	ENSMUSG00000004698.12	Hdac9	chr12	protein_coding	histone deacetylase 9
chr12	34362710	34439244	-	34424137	34439244	3pMXE	0.5	50	50	ENSMUST00000239340.2	ENSMUSG00000004698.12	Hdac9	chr12	protein_coding	histone deacetylase 9
chr12	34578344	34668123	-	34578344	34578599	5pMXE	0.33	50	50	ENSMUST00000110819.4	ENSMUSG00000004698.12	Hdac9	chr12	protein_coding	histone deacetylase 9
chr12	34877752	34911344	-	34877752	34956779	A5SS	0.33	50	50	ENSMUST00000239321.2	ENSMUSG00000004698.12	Hdac9	chr12	protein_coding	histone deacetylase 9
chr12	35097410	35128899	+	35097410	35118739	3pMXE	0.5	50	50	ENSMUST00000221831.2	ENSMUSG00000020590.17	Snx13	chr12	protein_coding	sorting nexin 13
chr12	35141669	35148229	+	35141669;35142912	35142824;35148229	ES	0.5	50	50	ENSMUST00000221272.2	ENSMUSG00000020590.17	Snx13	chr12	protein_coding	sorting nexin 13
chr12	35129011;35132970	35132868;35135938	+	35129011	35135938	cassetteExon	0.5	100	100	ENSMUST00000221272.2	ENSMUSG00000020590.17	Snx13	chr12	protein_coding	sorting nexin 13
chr12	35162503	35169732	+	35162503	35169765	A3SS	0.5	50	50	ENSMUST00000221272.2	ENSMUSG00000020590.17	Snx13	chr12	protein_coding	sorting nexin 13
chr12	35183379	35188025	+	35183379	35183514	3pMXE	0.5	50	50	ENSMUST00000163677.3	ENSMUSG00000020590.17	Snx13	chr12	protein_coding	sorting nexin 13
chr12	35562947	35576680	-	35562947;35565123	35565020;35576680	ES	0.5	50	50	ENSMUST00000116436.9	ENSMUSG00000019256.18	Ahr	chr12	protein_coding	aryl-hydrocarbon receptor
chr12	35562947	35576680	-	35565123	35576680	3pMXE	0.5	50	50	ENSMUST00000173414.2	ENSMUSG00000019256.18	Ahr	chr12	protein_coding	aryl-hydrocarbon receptor
chr12	35724278	35741946	-	35724278	35736173	5pMXE	0.5	50	50	ENSMUST00000222894.2	ENSMUSG00000113985.2	9130015A21Rik	chr12	lncRNA	RIKEN cDNA 9130015A21 gene
chr12	35975726;35976462	35976317;35978259	+	35975726	35978259	cassetteExon	0.5	100	100	ENSMUST00000042101.5	ENSMUSG00000036231.6	Agr3	chr12	protein_coding	anterior gradient 3
chr12	36074071;36080441	36080362;36092250	-	36074071	36092250	cassetteExon	0.5	100	100	ENSMUST00000020896.17	ENSMUSG00000020577.18	Tspan13	chr12	protein_coding	tetraspanin 13
chr12	36074071	36089484	-	36074071	36092250	A5SS	0.33	50	50	ENSMUST00000020896.17	ENSMUSG00000020577.18	Tspan13	chr12	protein_coding	tetraspanin 13
chr12	36074071	36089484	-	36074071	36080362	A5SS&ES	0.33	50	50	ENSMUST00000220641.2	ENSMUSG00000020577.18	Tspan13	chr12	protein_coding	tetraspanin 13
chr12	36174037	36184890	-	36174037;36180167	36179991;36184890	ES	0.5	50	50	ENSMUST00000020856.6	ENSMUSG00000020547.6	Bzw2	chr12	protein_coding	basic leucine zipper and W2 domains 2
chr12	36180167	36206667	-	36180167;36184954	36184890;36206667	ES	0.33	50	50	ENSMUST00000020856.6	ENSMUSG00000020547.6	Bzw2	chr12	protein_coding	basic leucine zipper and W2 domains 2
chr12	36150742	36154261	-	36143088	36154261	A3SS	0.33	50	50	ENSMUST00000020856.6	ENSMUSG00000020547.6	Bzw2	chr12	protein_coding	basic leucine zipper and W2 domains 2
chr12	36153825	36154261	-	36143088	36154261	A3SS	0.33	50	50	ENSMUST00000020856.6	ENSMUSG00000020547.6	Bzw2	chr12	protein_coding	basic leucine zipper and W2 domains 2
chr12	36190841	36206667	-	36184954	36206667	A3SS	0.33	50	50	ENSMUST00000020856.6	ENSMUSG00000020547.6	Bzw2	chr12	protein_coding	basic leucine zipper and W2 domains 2
chr12	36184954	36189129	-	36184954	36206667	A5SS	0.33	50	50	ENSMUST00000020856.6	ENSMUSG00000020547.6	Bzw2	chr12	protein_coding	basic leucine zipper and W2 domains 2
chr12	36184954	36206280	-	36184954	36206667	A5SS	0.33	50	50	ENSMUST00000020856.6	ENSMUSG00000020547.6	Bzw2	chr12	protein_coding	basic leucine zipper and W2 domains 2
chr12	36153825	36154261	-	36150742	36154261	A3SS	0.33	50	50	ENSMUST00000221521.2	ENSMUSG00000020547.6	Bzw2	chr12	protein_coding	basic leucine zipper and W2 domains 2
chr12	36174037;36180167	36179991;36206667	-	36174037;36184954	36184890;36206667	MXE	0.5	100	100	ENSMUST00000221388.2	ENSMUSG00000020547.6	Bzw2	chr12	protein_coding	basic leucine zipper and W2 domains 2
chr12	36206743	36208017	-	36206743	36207064	5pMXE	0.5	50	50	ENSMUST00000223474.2	ENSMUSG00000020547.6	Bzw2	chr12	protein_coding	basic leucine zipper and W2 domains 2
chr12	36184954	36189129	-	36184954	36206280	A5SS	0.33	50	50	ENSMUST00000220828.2	ENSMUSG00000020547.6	Bzw2	chr12	protein_coding	basic leucine zipper and W2 domains 2
chr12	36190841	36206667	-	36180167	36206667	A3SS	0.33	50	50	ENSMUST00000222279.2	ENSMUSG00000020547.6	Bzw2	chr12	protein_coding	basic leucine zipper and W2 domains 2
chr12	36174037	36184890	-	36180167	36184890	3pMXE	0.5	50	50	ENSMUST00000220763.2	ENSMUSG00000020547.6	Bzw2	chr12	protein_coding	basic leucine zipper and W2 domains 2
chr12	36264415	36271490	-	36264415	36268170	5pMXE	0.33	50	50	ENSMUST00000020853.8	ENSMUSG00000020545.15	Lrrc72	chr12	protein_coding	leucine rich repeat containing 72
chr12	36264415	36267809	-	36264415	36268170	A5SS	0.33	50	50	ENSMUST00000020853.8	ENSMUSG00000020545.15	Lrrc72	chr12	protein_coding	leucine rich repeat containing 72
chr12	36297690	36303219	-	36297671	36303219	A3SS	0.5	50	50	ENSMUST00000221155.2	ENSMUSG00000020545.15	Lrrc72	chr12	protein_coding	leucine rich repeat containing 72
chr12	36264415	36267809	-	36264415	36271490	A5SS	0.33	50	50	ENSMUST00000221155.2	ENSMUSG00000020545.15	Lrrc72	chr12	protein_coding	leucine rich repeat containing 72
chr12	36380674	36381778	+	36378015	36381778	A5SS	0.5	50	50	ENSMUST00000223024.2	ENSMUSG00000114141.2	Gm34215	chr12	lncRNA	predicted gene, 34215
chr12	36440621	36523101	+	36440621;36476437	36476288;36523101	ES	0.5	50	50	ENSMUST00000221452.2	ENSMUSG00000043153.7	Crppa	chr12	protein_coding	CDP-L-ribitol pyrophosphorylase A
chr12	36597959	36738248	+	36597959	36633100	3pMXE	0.5	50	50	ENSMUST00000221452.2	ENSMUSG00000043153.7	Crppa	chr12	protein_coding	CDP-L-ribitol pyrophosphorylase A
chr12	36432302	36440345	+	36432023	36440345	A5SS	0.5	50	50	ENSMUST00000221452.2	ENSMUSG00000043153.7	Crppa	chr12	protein_coding	CDP-L-ribitol pyrophosphorylase A
chr12	36995748	37000770	-	36995748;36997223	36997093;37000770	ES	0.5	50	50	ENSMUST00000222465.2	ENSMUSG00000113507.2	Gm48613	chr12	lncRNA	predicted gene, 48613
chr12	37293835	37294311	+	37293835	37302422	A3SS	0.5	50	50	ENSMUST00000049874.14	ENSMUSG00000050103.19	Agmo	chr12	protein_coding	alkylglycerol monooxygenase
chr12	37464988	37469945	+	37464988	37631443	A3SS	0.33	50	50	ENSMUST00000049874.14	ENSMUSG00000050103.19	Agmo	chr12	protein_coding	alkylglycerol monooxygenase
chr12	37464988	37614462	+	37464988	37631443	A3SS	0.33	50	50	ENSMUST00000049874.14	ENSMUSG00000050103.19	Agmo	chr12	protein_coding	alkylglycerol monooxygenase
chr12	37495295	37631443	+	37464988	37631443	A5SS	0.5	50	50	ENSMUST00000049874.14	ENSMUSG00000050103.19	Agmo	chr12	protein_coding	alkylglycerol monooxygenase
chr12	37464988	37469945	+	37464988	37614462	A3SS	0.33	50	50	ENSMUST00000160390.2	ENSMUSG00000050103.19	Agmo	chr12	protein_coding	alkylglycerol monooxygenase
chr12	37930417	38031754	+	37867928	38031754	A5SS	0.33	50	50	ENSMUST00000222337.2	ENSMUSG00000036095.12	Dgkb	chr12	protein_coding	diacylglycerol kinase, beta
chr12	37930953	38031754	+	37867928	38031754	A5SS	0.33	50	50	ENSMUST00000222337.2	ENSMUSG00000036095.12	Dgkb	chr12	protein_coding	diacylglycerol kinase, beta
chr12	38134242	38150363	+	38134242;38137592	38137572;38150363	ES	0.5	50	50	ENSMUST00000221176.2	ENSMUSG00000036095.12	Dgkb	chr12	protein_coding	diacylglycerol kinase, beta
chr12	37930953	38031754	+	37930417	38031754	A5SS	0.33	50	50	ENSMUST00000221176.2	ENSMUSG00000036095.12	Dgkb	chr12	protein_coding	diacylglycerol kinase, beta
chr12	38070011	38134166	+	38032009	38134166	A5SS	0.5	50	50	ENSMUST00000221176.2	ENSMUSG00000036095.12	Dgkb	chr12	protein_coding	diacylglycerol kinase, beta
chr12	38488733	38630143	+	38488733	38652715	A3SS	0.5	50	50	ENSMUST00000220990.2	ENSMUSG00000036095.12	Dgkb	chr12	protein_coding	diacylglycerol kinase, beta
chr12	38612542	38635407	-	38606080	38635407	A3SS	0.5	50	50	ENSMUST00000222922.2	ENSMUSG00000112967.2	4930428E07Rik	chr12	lncRNA	RIKEN cDNA 4930428E07 gene
chr12	38606080	38610613	-	38606080	38635407	A5SS	0.5	50	50	ENSMUST00000222922.2	ENSMUSG00000112967.2	4930428E07Rik	chr12	lncRNA	RIKEN cDNA 4930428E07 gene
chr12	38833284	38877777	+	38833284;38843223	38843170;38877777	ES	0.25	50	50	ENSMUST00000160244.8	ENSMUSG00000004151.18	Etv1	chr12	protein_coding	ets variant 1
chr12	38877906	38885068	+	38877906;38881268	38881080;38885068	ES	0.5	50	50	ENSMUST00000160244.8	ENSMUSG00000004151.18	Etv1	chr12	protein_coding	ets variant 1
chr12	38885315;38902287	38902219;38904159	+	38885315	38904159	cassetteExon	0.5	100	100	ENSMUST00000160244.8	ENSMUSG00000004151.18	Etv1	chr12	protein_coding	ets variant 1
chr12	38830420	38830847	+	38829478	38830847	A5SS	0.33	50	50	ENSMUST00000160244.8	ENSMUSG00000004151.18	Etv1	chr12	protein_coding	ets variant 1
chr12	38830714	38830847	+	38829478	38830847	A5SS	0.33	50	50	ENSMUST00000160244.8	ENSMUSG00000004151.18	Etv1	chr12	protein_coding	ets variant 1
chr12	38831301	38831798	+	38830978	38831798	A5SS	0.5	50	50	ENSMUST00000160244.8	ENSMUSG00000004151.18	Etv1	chr12	protein_coding	ets variant 1
chr12	38833801	38843170	+	38833284	38843170	A5SS	0.5	50	50	ENSMUST00000160244.8	ENSMUSG00000004151.18	Etv1	chr12	protein_coding	ets variant 1
chr12	38833801	38877777	+	38843223	38877777	A5SS&ES	0.25	50	50	ENSMUST00000160244.8	ENSMUSG00000004151.18	Etv1	chr12	protein_coding	ets variant 1
chr12	38874757	38877777	+	38843223	38877777	A5SS	0.25	50	50	ENSMUST00000160244.8	ENSMUSG00000004151.18	Etv1	chr12	protein_coding	ets variant 1
chr12	38830420;38830714	38830519;38830847	+	38830420	38830847	cassetteExon	0.5	100	100	ENSMUST00000095767.11	ENSMUSG00000004151.18	Etv1	chr12	protein_coding	ets variant 1
chr12	38887487	38902219	+	38885315	38902219	A5SS	0.5	50	50	ENSMUST00000095767.11	ENSMUSG00000004151.18	Etv1	chr12	protein_coding	ets variant 1
chr12	38830420	38830847	+	38830714	38830847	A5SS	0.33	50	50	ENSMUST00000161164.8	ENSMUSG00000004151.18	Etv1	chr12	protein_coding	ets variant 1
chr12	38833801	38877777	+	38833284	38877777	A5SS	0.25	50	50	ENSMUST00000160996.8	ENSMUSG00000004151.18	Etv1	chr12	protein_coding	ets variant 1
chr12	38874757	38877777	+	38833284	38877777	A5SS	0.25	50	50	ENSMUST00000160996.8	ENSMUSG00000004151.18	Etv1	chr12	protein_coding	ets variant 1
chr12	38833801;38843223	38843170;38877777	+	38833801	38877777	cassetteExon	0.5	100	100	ENSMUST00000161980.8	ENSMUSG00000004151.18	Etv1	chr12	protein_coding	ets variant 1
chr12	38874757	38877777	+	38833801	38877777	A5SS	0.25	50	50	ENSMUST00000161980.8	ENSMUSG00000004151.18	Etv1	chr12	protein_coding	ets variant 1
chr12	38877906	38885068	+	38877906	38881080	3pMXE	0.5	50	50	ENSMUST00000220492.2	ENSMUSG00000004151.18	Etv1	chr12	protein_coding	ets variant 1
chr12	39032606	39033960	-	39024265	39033960	A3SS	0.5	50	50	ENSMUST00000220753.2	ENSMUSG00000113092.2	Gm34662	chr12	lncRNA	predicted gene, 34662
chr12	39163922	39202204	-	39124781	39202204	A3SS	0.33	50	50	ENSMUST00000222945.2	ENSMUSG00000113272.2	Gm34809	chr12	lncRNA	predicted gene, 34809
chr12	39186550	39202204	-	39124781	39202204	A3SS	0.33	50	50	ENSMUST00000222945.2	ENSMUSG00000113272.2	Gm34809	chr12	lncRNA	predicted gene, 34809
chr12	39186550	39202204	-	39163922	39202204	A3SS	0.33	50	50	ENSMUST00000221271.2	ENSMUSG00000113272.2	Gm34809	chr12	lncRNA	predicted gene, 34809
chr12	40086832	40087837	-	40086832	40087262	5pMXE	0.5	50	50	ENSMUST00000144910.2	ENSMUSG00000047446.19	Arl4a	chr12	protein_coding	ADP-ribosylation factor-like 4A
chr12	40061459	40064236	-	40061459	40086566	A5SS	0.5	50	50	ENSMUST00000144910.2	ENSMUSG00000047446.19	Arl4a	chr12	protein_coding	ADP-ribosylation factor-like 4A
chr12	40119445	40123301	-	40113288	40123301	A3SS	0.5	50	50	ENSMUST00000078481.14	ENSMUSG00000002565.17	Scin	chr12	protein_coding	scinderin
chr12	40113288	40118914	-	40113288	40123301	A5SS	0.5	50	50	ENSMUST00000078481.14	ENSMUSG00000002565.17	Scin	chr12	protein_coding	scinderin
chr12	40227227;40230773	40230645;40235288	-	40227227	40235288	cassetteExon	0.5	100	100	ENSMUST00000220951.2	ENSMUSG00000071342.6	Lsmem1	chr12	protein_coding	leucine-rich single-pass membrane protein 1
chr12	40254013	40256988	-	40254013;40254424	40254296;40256988	ES	0.5	50	50	ENSMUST00000001672.12	ENSMUSG00000001627.13	Ifrd1	chr12	protein_coding	interferon-related developmental regulator 1
chr12	40263258	40266189	-	40263258;40264134	40263977;40266189	ES	0.5	50	50	ENSMUST00000001672.12	ENSMUSG00000001627.13	Ifrd1	chr12	protein_coding	interferon-related developmental regulator 1
chr12	40267481	40297799	-	40267481	40272868	5pMXE	0.5	50	50	ENSMUST00000001672.12	ENSMUSG00000001627.13	Ifrd1	chr12	protein_coding	interferon-related developmental regulator 1
chr12	40254013	40256988	-	40254013	40254296	5pMXE	0.5	50	50	ENSMUST00000170119.8	ENSMUSG00000001627.13	Ifrd1	chr12	protein_coding	interferon-related developmental regulator 1
chr12	40263258	40266189	-	40264134	40266189	3pMXE	0.5	50	50	ENSMUST00000169926.8	ENSMUSG00000001627.13	Ifrd1	chr12	protein_coding	interferon-related developmental regulator 1
chr12	40297862	40298267	-	40297862	40297954	5pMXE	0.33	50	50	ENSMUST00000169926.8	ENSMUSG00000001627.13	Ifrd1	chr12	protein_coding	interferon-related developmental regulator 1
chr12	40297862	40298300	-	40297862	40297954	5pMXE	0.33	50	50	ENSMUST00000169926.8	ENSMUSG00000001627.13	Ifrd1	chr12	protein_coding	interferon-related developmental regulator 1
chr12	40297862	40298267	-	40297862	40298300	A5SS	0.33	50	50	ENSMUST00000169319.8	ENSMUSG00000001627.13	Ifrd1	chr12	protein_coding	interferon-related developmental regulator 1
chr12	40274875	40279026	+	40274721	40279026	A5SS	0.5	50	50	ENSMUST00000170019.2	ENSMUSG00000035983.5	Gm7008	chr12	lncRNA	predicted gene 7008
chr12	40428873	40495665	-	40428873;40460952	40460575;40495665	ES	0.5	50	50	ENSMUST00000069692.10	ENSMUSG00000055917.16	Zfp277	chr12	protein_coding	zinc finger protein 277
chr12	40886701	40891236	+	40886701;40888553	40888440;40891236	ES	0.5	50	50	ENSMUST00000037488.8	ENSMUSG00000035954.11	Dock4	chr12	protein_coding	dedicator of cytokinesis 4
chr12	40844337	40844596	+	40840160	40844596	A5SS	0.5	50	50	ENSMUST00000037488.8	ENSMUSG00000035954.11	Dock4	chr12	protein_coding	dedicator of cytokinesis 4
chr12	43013911;43023167	43023083;43062204	-	43013911	43062204	cassetteExon	0.5	100	100	ENSMUST00000220044.2	ENSMUSG00000112407.2	Gm33340	chr12	lncRNA	predicted gene, 33340
chr12	43013911;43053305	43053182;43062204	-	43013911	43062204	cassetteExon	0.5	100	100	ENSMUST00000220044.2	ENSMUSG00000112407.2	Gm33340	chr12	lncRNA	predicted gene, 33340
chr12	43013911;43053305	43053182;43062204	-	43013911;43023167	43023083;43062204	MXE	0.5	100	100	ENSMUST00000219846.2	ENSMUSG00000112407.2	Gm33340	chr12	lncRNA	predicted gene, 33340
chr12	43079638	43080860	-	43062262	43080860	A3SS	0.5	50	50	ENSMUST00000219475.2	ENSMUSG00000112407.2	Gm33340	chr12	lncRNA	predicted gene, 33340
chr12	43062262	43070622	-	43062262	43080860	A5SS	0.5	50	50	ENSMUST00000219475.2	ENSMUSG00000112407.2	Gm33340	chr12	lncRNA	predicted gene, 33340
chr12	44255096;44255907	44255820;44256723	-	44255096	44256723	cassetteExon	0.5	100	100	ENSMUST00000015049.5	ENSMUSG00000014905.5	Dnajb9	chr12	protein_coding	DnaJ heat shock protein family (Hsp40) member B9
chr12	44346074	44354702	+	44346074;44351888	44351694;44354702	ES	0.5	50	50	ENSMUST00000122902.8	ENSMUSG00000036257.16	Pnpla8	chr12	protein_coding	patatin-like phospholipase domain containing 8
chr12	44316084	44330094	+	44301556	44330094	A5SS	0.5	50	50	ENSMUST00000122902.8	ENSMUSG00000036257.16	Pnpla8	chr12	protein_coding	patatin-like phospholipase domain containing 8
chr12	44354930	44358108	+	44354897	44358108	A5SS	0.5	50	50	ENSMUST00000122902.8	ENSMUSG00000036257.16	Pnpla8	chr12	protein_coding	patatin-like phospholipase domain containing 8
chr12	44316084	44330094	+	44316084	44329361	A3SS	0.5	50	50	ENSMUST00000043082.16	ENSMUSG00000036257.16	Pnpla8	chr12	protein_coding	patatin-like phospholipase domain containing 8
chr12	44322134	44329361	+	44316084	44329361	A5SS	0.5	50	50	ENSMUST00000043082.16	ENSMUSG00000036257.16	Pnpla8	chr12	protein_coding	patatin-like phospholipase domain containing 8
chr12	44375879	44503408	+	44375879	44434683	3pMXE	0.5	50	50	ENSMUST00000218940.2	ENSMUSG00000020598.17	Nrcam	chr12	protein_coding	neuronal cell adhesion molecule
chr12	44376164	44434683	+	44375879	44434683	A5SS	0.33	50	50	ENSMUST00000218940.2	ENSMUSG00000020598.17	Nrcam	chr12	protein_coding	neuronal cell adhesion molecule
chr12	44429474	44434683	+	44375879	44434683	A5SS	0.33	50	50	ENSMUST00000218940.2	ENSMUSG00000020598.17	Nrcam	chr12	protein_coding	neuronal cell adhesion molecule
chr12	44375879	44503408	+	44375879;44434838	44434683;44503408	ES	0.33	50	50	ENSMUST00000110748.4	ENSMUSG00000020598.17	Nrcam	chr12	protein_coding	neuronal cell adhesion molecule
chr12	44591678	44594015	+	44591678;44592218	44592162;44594015	ES	0.5	50	50	ENSMUST00000110748.4	ENSMUSG00000020598.17	Nrcam	chr12	protein_coding	neuronal cell adhesion molecule
chr12	44598219	44609210	+	44598219;44606588	44606445;44609210	ES	0.5	50	50	ENSMUST00000110748.4	ENSMUSG00000020598.17	Nrcam	chr12	protein_coding	neuronal cell adhesion molecule
chr12	44579442;44581857	44581840;44584034	+	44579442	44584034	cassetteExon	0.5	100	100	ENSMUST00000110748.4	ENSMUSG00000020598.17	Nrcam	chr12	protein_coding	neuronal cell adhesion molecule
chr12	44613195;44613652	44613623;44615327	+	44613195	44615327	cassetteExon	0.5	100	100	ENSMUST00000110748.4	ENSMUSG00000020598.17	Nrcam	chr12	protein_coding	neuronal cell adhesion molecule
chr12	44637842;44644576	44644565;44645133	+	44637842	44645133	cassetteExon	0.5	100	100	ENSMUST00000110748.4	ENSMUSG00000020598.17	Nrcam	chr12	protein_coding	neuronal cell adhesion molecule
chr12	44615428	44617032	+	44615428	44616993	A3SS	0.5	50	50	ENSMUST00000110748.4	ENSMUSG00000020598.17	Nrcam	chr12	protein_coding	neuronal cell adhesion molecule
chr12	44637842	44640923	+	44637842	44645133	A3SS	0.33	50	50	ENSMUST00000110748.4	ENSMUSG00000020598.17	Nrcam	chr12	protein_coding	neuronal cell adhesion molecule
chr12	44485934	44503408	+	44434838	44503408	A5SS	0.33	50	50	ENSMUST00000110748.4	ENSMUSG00000020598.17	Nrcam	chr12	protein_coding	neuronal cell adhesion molecule
chr12	44579455	44584034	+	44579442	44584034	A5SS	0.33	50	50	ENSMUST00000110748.4	ENSMUSG00000020598.17	Nrcam	chr12	protein_coding	neuronal cell adhesion molecule
chr12	44624963	44636891	+	44623572	44636891	A5SS	0.33	50	50	ENSMUST00000110748.4	ENSMUSG00000020598.17	Nrcam	chr12	protein_coding	neuronal cell adhesion molecule
chr12	44631770	44636891	+	44623572	44636891	A5SS	0.33	50	50	ENSMUST00000110748.4	ENSMUSG00000020598.17	Nrcam	chr12	protein_coding	neuronal cell adhesion molecule
chr12	44637846	44645133	+	44637842	44645133	A5SS	0.33	50	50	ENSMUST00000110748.4	ENSMUSG00000020598.17	Nrcam	chr12	protein_coding	neuronal cell adhesion molecule
chr12	44581857	44584034	+	44579455	44584034	A5SS	0.33	50	50	ENSMUST00000219592.2	ENSMUSG00000020598.17	Nrcam	chr12	protein_coding	neuronal cell adhesion molecule
chr12	44624963	44636891	+	44624963;44631770	44631618;44636891	ES	0.33	50	50	ENSMUST00000020939.16	ENSMUSG00000020598.17	Nrcam	chr12	protein_coding	neuronal cell adhesion molecule
chr12	44630575	44631618	+	44624963	44631618	A5SS	0.5	50	50	ENSMUST00000020939.16	ENSMUSG00000020598.17	Nrcam	chr12	protein_coding	neuronal cell adhesion molecule
chr12	44485934	44503408	+	44375879	44503408	A5SS	0.33	50	50	ENSMUST00000220126.2	ENSMUSG00000020598.17	Nrcam	chr12	protein_coding	neuronal cell adhesion molecule
chr12	44429474	44434683	+	44376164	44434683	A5SS	0.33	50	50	ENSMUST00000217907.2	ENSMUSG00000020598.17	Nrcam	chr12	protein_coding	neuronal cell adhesion molecule
chr12	44591678	44594015	+	44591678	44592162	3pMXE	0.5	50	50	ENSMUST00000219928.2	ENSMUSG00000020598.17	Nrcam	chr12	protein_coding	neuronal cell adhesion molecule
chr12	44637842	44644565	+	44637842;44640984	44640923;44644565	ES	0.5	50	50	ENSMUST00000220123.2	ENSMUSG00000020598.17	Nrcam	chr12	protein_coding	neuronal cell adhesion molecule
chr12	44637846	44645133	+	44644576	44645133	A5SS&ES	0.33	50	50	ENSMUST00000220123.2	ENSMUSG00000020598.17	Nrcam	chr12	protein_coding	neuronal cell adhesion molecule
chr12	44624963	44636891	+	44631770	44636891	5pMXE	0.33	50	50	ENSMUST00000218062.2	ENSMUSG00000020598.17	Nrcam	chr12	protein_coding	neuronal cell adhesion molecule
chr12	45062279	45066250	-	44949773	45066250	A3SS	0.5	50	50	ENSMUST00000053768.14	ENSMUSG00000046314.17	Stxbp6	chr12	protein_coding	syntaxin binding protein 6 (amisyn)
chr12	44949773	45059632	-	44949773	45066250	A5SS	0.5	50	50	ENSMUST00000053768.14	ENSMUSG00000046314.17	Stxbp6	chr12	protein_coding	syntaxin binding protein 6 (amisyn)
chr12	45066438	45120721	-	45066438	45120978	A5SS	0.33	50	50	ENSMUST00000053768.14	ENSMUSG00000046314.17	Stxbp6	chr12	protein_coding	syntaxin binding protein 6 (amisyn)
chr12	45066438	45120882	-	45066438	45120978	A5SS	0.33	50	50	ENSMUST00000053768.14	ENSMUSG00000046314.17	Stxbp6	chr12	protein_coding	syntaxin binding protein 6 (amisyn)
chr12	45066438	45120882	-	45066438	45120721	A5SS	0.33	50	50	ENSMUST00000120531.8	ENSMUSG00000046314.17	Stxbp6	chr12	protein_coding	syntaxin binding protein 6 (amisyn)
chr12	45484077	45484197	+	45476343	45484197	A5SS	0.5	50	50	ENSMUST00000219455.2	ENSMUSG00000092404.3	Gm9921	chr12	lncRNA	predicted gene 9921
chr12	45513306	45535395	+	45513306;45521814	45521653;45535395	ES	0.5	50	50	ENSMUST00000219336.2	ENSMUSG00000112054.2	Gm33680	chr12	lncRNA	predicted gene, 33680
chr12	45535556	45536912	+	45535556	45536917	A3SS	0.5	50	50	ENSMUST00000219336.2	ENSMUSG00000112054.2	Gm33680	chr12	lncRNA	predicted gene, 33680
chr12	46748167	46767473	-	46760352	46767473	A3SS&ES	0.5	50	50	ENSMUST00000021438.8	ENSMUSG00000021047.8	Nova1	chr12	protein_coding	NOVA alternative splicing regulator 1
chr12	46758702	46760281	-	46747756	46760281	A3SS	0.5	50	50	ENSMUST00000021438.8	ENSMUSG00000021047.8	Nova1	chr12	protein_coding	NOVA alternative splicing regulator 1
chr12	46863812	46864169	-	46863812	46865399	A5SS	0.5	50	50	ENSMUST00000021438.8	ENSMUSG00000021047.8	Nova1	chr12	protein_coding	NOVA alternative splicing regulator 1
chr12	49437253	49453632	+	49437253	49437792	3pMXE	0.5	50	50	ENSMUST00000110746.2	ENSMUSG00000089922.3	Gm43517	chr12	protein_coding	predicted gene 43517
chr12	49437538	49453632	+	49437253	49453632	A5SS	0.5	50	50	ENSMUST00000127041.3	ENSMUSG00000104861.2	3110039M20Rik	chr12	lncRNA	RIKEN cDNA 3110039M20 gene
chr12	51410329;51410803	51410735;51412038	+	51410329	51412038	cassetteExon	0.5	100	100	ENSMUST00000054308.13	ENSMUSG00000035293.14	G2e3	chr12	protein_coding	G2/M-phase specific E3 ubiquitin ligase
chr12	51410329	51414535	+	51410329	51412038	A3SS&ES	0.33	50	50	ENSMUST00000054308.13	ENSMUSG00000035293.14	G2e3	chr12	protein_coding	G2/M-phase specific E3 ubiquitin ligase
chr12	51410329	51414535	+	51410329	51410735	A3SS&ES	0.33	50	50	ENSMUST00000119211.8	ENSMUSG00000035293.14	G2e3	chr12	protein_coding	G2/M-phase specific E3 ubiquitin ligase
chr12	51430958	51433850	+	51430958	51433833	A3SS	0.5	50	50	ENSMUST00000219434.2	ENSMUSG00000020952.11	Scfd1	chr12	protein_coding	Sec1 family domain containing 1
chr12	51461706	51462298	+	51461706	51462406	A3SS	0.5	50	50	ENSMUST00000219434.2	ENSMUSG00000020952.11	Scfd1	chr12	protein_coding	Sec1 family domain containing 1
chr12	51489366	51491578	+	51489366	51491767	A3SS	0.5	50	50	ENSMUST00000021335.7	ENSMUSG00000020952.11	Scfd1	chr12	protein_coding	Sec1 family domain containing 1
chr12	51689997	51694777	-	51676290	51694777	A3SS	0.5	50	50	ENSMUST00000169503.4	ENSMUSG00000020954.17	Strn3	chr12	protein_coding	striatin, calmodulin binding protein 3
chr12	51676290	51680362	-	51676290	51694777	A5SS	0.5	50	50	ENSMUST00000169503.4	ENSMUSG00000020954.17	Strn3	chr12	protein_coding	striatin, calmodulin binding protein 3
chr12	51792323	51792877	-	51792314	51792877	A3SS	0.5	50	50	ENSMUST00000042052.9	ENSMUSG00000035247.17	Hectd1	chr12	protein_coding	HECT domain E3 ubiquitin protein ligase 1
chr12	51829376	51830965	-	51829370	51830965	A3SS	0.5	50	50	ENSMUST00000042052.9	ENSMUSG00000035247.17	Hectd1	chr12	protein_coding	HECT domain E3 ubiquitin protein ligase 1
chr12	51847758	51848947	-	51847755	51848947	A3SS	0.5	50	50	ENSMUST00000042052.9	ENSMUSG00000035247.17	Hectd1	chr12	protein_coding	HECT domain E3 ubiquitin protein ligase 1
chr12	51956876;51959014	51958988;51961757	-	51956876	51961757	cassetteExon	0.5	100	100	ENSMUST00000040583.7	ENSMUSG00000035181.7	Heatr5a	chr12	protein_coding	HEAT repeat containing 5A
chr12	52147284;52152178	52152002;52190752	+	52147284	52190752	cassetteExon	0.5	100	100	ENSMUST00000040090.16	ENSMUSG00000035142.19	Nubpl	chr12	protein_coding	nucleotide binding protein-like
chr12	52228090;52288222	52288060;52349464	+	52228090;52333206	52317822;52349464	MXE	0.5	100	100	ENSMUST00000040090.16	ENSMUSG00000035142.19	Nubpl	chr12	protein_coding	nucleotide binding protein-like
chr12	52179301	52190752	+	52147284	52190752	A5SS	0.33	50	50	ENSMUST00000040090.16	ENSMUSG00000035142.19	Nubpl	chr12	protein_coding	nucleotide binding protein-like
chr12	52223058	52227875	+	52190842	52227875	A5SS	0.5	50	50	ENSMUST00000040090.16	ENSMUSG00000035142.19	Nubpl	chr12	protein_coding	nucleotide binding protein-like
chr12	52179301	52190752	+	52152178	52190752	A5SS	0.33	50	50	ENSMUST00000159708.8	ENSMUSG00000035142.19	Nubpl	chr12	protein_coding	nucleotide binding protein-like
chr12	52228090	52317822	+	52228090	52288060	A3SS&ES	0.5	50	50	ENSMUST00000159567.2	ENSMUSG00000035142.19	Nubpl	chr12	protein_coding	nucleotide binding protein-like
chr12	52333206	52349464	+	52288222	52349464	A5SS	0.5	50	50	ENSMUST00000159567.2	ENSMUSG00000035142.19	Nubpl	chr12	protein_coding	nucleotide binding protein-like
chr12	52589419	52604272	+	52589419	52590979	3pMXE	0.5	50	50	ENSMUST00000218755.2	ENSMUSG00000035133.10	Arhgap5	chr12	protein_coding	Rho GTPase activating protein 5
chr12	52550831	52562890	+	52550831	52589272	A3SS	0.5	50	50	ENSMUST00000218755.2	ENSMUSG00000035133.10	Arhgap5	chr12	protein_coding	Rho GTPase activating protein 5
chr12	52566750	52589272	+	52550831	52589272	A5SS	0.5	50	50	ENSMUST00000218755.2	ENSMUSG00000035133.10	Arhgap5	chr12	protein_coding	Rho GTPase activating protein 5
chr12	52550831	52589272	+	52550831;52566750	52562890;52589272	ES	0.5	50	50	ENSMUST00000219443.2	ENSMUSG00000035133.10	Arhgap5	chr12	protein_coding	Rho GTPase activating protein 5
chr12	52648635	52648773	-	52646861	52648773	A3SS	0.5	50	50	ENSMUST00000187526.7	ENSMUSG00000100315.7	1700031P21Rik	chr12	lncRNA	RIKEN cDNA 1700031P21 gene
chr12	52648841	52648963	-	52648838	52648963	A3SS	0.5	50	50	ENSMUST00000187526.7	ENSMUSG00000100315.7	1700031P21Rik	chr12	lncRNA	RIKEN cDNA 1700031P21 gene
chr12	53151513	53194594	+	53151513;53189551	53186164;53194594	ES	0.5	50	50	ENSMUST00000095737.5	ENSMUSG00000061603.9	Akap6	chr12	protein_coding	A kinase (PRKA) anchor protein 6
chr12	53151513	53186164	+	53151513	53194594	A3SS	0.5	50	50	ENSMUST00000219786.2	ENSMUSG00000061603.9	Akap6	chr12	protein_coding	A kinase (PRKA) anchor protein 6
chr12	53189551	53194594	+	53151513	53194594	A5SS	0.5	50	50	ENSMUST00000219786.2	ENSMUSG00000061603.9	Akap6	chr12	protein_coding	A kinase (PRKA) anchor protein 6
chr12	53295530;53401217	53401128;53547817	+	53295530	53547817	cassetteExon	0.5	100	100	ENSMUST00000223358.3	ENSMUSG00000021010.10	Npas3	chr12	protein_coding	neuronal PAS domain protein 3
chr12	53548061;53548223	53548173;53687237	+	53548061	53687237	cassetteExon	0.5	100	100	ENSMUST00000223358.3	ENSMUSG00000021010.10	Npas3	chr12	protein_coding	neuronal PAS domain protein 3
chr12	53548061	53687243	+	53548061	53687237	A3SS	0.33	50	50	ENSMUST00000223358.3	ENSMUSG00000021010.10	Npas3	chr12	protein_coding	neuronal PAS domain protein 3
chr12	53299878	53547817	+	53295530	53547817	A5SS	0.33	50	50	ENSMUST00000223358.3	ENSMUSG00000021010.10	Npas3	chr12	protein_coding	neuronal PAS domain protein 3
chr12	54112698	54114521	+	54112689	54114521	A5SS	0.5	50	50	ENSMUST00000223358.3	ENSMUSG00000021010.10	Npas3	chr12	protein_coding	neuronal PAS domain protein 3
chr12	53548061	53548173	+	53548061	53687243	A3SS	0.33	50	50	ENSMUST00000101432.3	ENSMUSG00000021010.10	Npas3	chr12	protein_coding	neuronal PAS domain protein 3
chr12	53299878	53547817	+	53401217	53547817	A5SS&ES	0.33	50	50	ENSMUST00000101432.3	ENSMUSG00000021010.10	Npas3	chr12	protein_coding	neuronal PAS domain protein 3
chr12	53350555;53351109	53350949;53356347	-	53350555	53356347	cassetteExon	0.5	100	100	ENSMUST00000222223.2	ENSMUSG00000113179.2	1700030L22Rik	chr12	lncRNA	RIKEN cDNA 1700030L22 gene
chr12	54693320	54697352	-	54693320	54703157	A5SS	0.33	50	50	ENSMUST00000056228.8	ENSMUSG00000044408.8	Sptssa	chr12	protein_coding	serine palmitoyltransferase, small subunit A
chr12	54693320	54702924	-	54693320	54703157	A5SS	0.33	50	50	ENSMUST00000056228.8	ENSMUSG00000044408.8	Sptssa	chr12	protein_coding	serine palmitoyltransferase, small subunit A
chr12	54693320	54702924	-	54693320	54697352	A5SS&ES	0.33	50	50	ENSMUST00000218147.2	ENSMUSG00000044408.8	Sptssa	chr12	protein_coding	serine palmitoyltransferase, small subunit A
chr12	54720635	54732645	-	54720635;54725408	54725295;54732645	ES	0.5	50	50	ENSMUST00000161592.8	ENSMUSG00000054302.16	Eapp	chr12	protein_coding	E2F-associated phosphoprotein
chr12	54737141	54738785	-	54732756	54738785	A3SS	0.5	50	50	ENSMUST00000161592.8	ENSMUSG00000054302.16	Eapp	chr12	protein_coding	E2F-associated phosphoprotein
chr12	54738868	54739560	-	54738880	54739560	A3SS	0.5	50	50	ENSMUST00000161592.8	ENSMUSG00000054302.16	Eapp	chr12	protein_coding	E2F-associated phosphoprotein
chr12	54814927	54830188	-	54814927;54817625	54817504;54830188	ES	0.5	50	50	ENSMUST00000005798.9	ENSMUSG00000005656.10	Snx6	chr12	protein_coding	sorting nexin 6
chr12	54817625	54830800	-	54817625;54830298	54830188;54830800	ES	0.33	50	50	ENSMUST00000005798.9	ENSMUSG00000005656.10	Snx6	chr12	protein_coding	sorting nexin 6
chr12	54814927	54830800	-	54814927;54817625	54817504;54830800	ES	0.33	50	50	ENSMUST00000218934.2	ENSMUSG00000005656.10	Snx6	chr12	protein_coding	sorting nexin 6
chr12	54814927;54830298	54830188;54830800	-	54814927;54817625	54817504;54830800	MXE	0.5	100	100	ENSMUST00000218934.2	ENSMUSG00000005656.10	Snx6	chr12	protein_coding	sorting nexin 6
chr12	54814927	54830800	-	54814927;54830298	54830188;54830800	ES	0.33	50	50	ENSMUST00000219781.2	ENSMUSG00000005656.10	Snx6	chr12	protein_coding	sorting nexin 6
chr12	54814927	54830188	-	54814927	54817504	5pMXE	0.33	50	50	ENSMUST00000218337.2	ENSMUSG00000005656.10	Snx6	chr12	protein_coding	sorting nexin 6
chr12	54814927	54830800	-	54814927	54817504	5pMXE	0.33	50	50	ENSMUST00000218337.2	ENSMUSG00000005656.10	Snx6	chr12	protein_coding	sorting nexin 6
chr12	54814927	54830800	-	54830298	54830800	3pMXE	0.33	50	50	ENSMUST00000219302.2	ENSMUSG00000005656.10	Snx6	chr12	protein_coding	sorting nexin 6
chr12	54817625	54830800	-	54830298	54830800	3pMXE	0.33	50	50	ENSMUST00000219302.2	ENSMUSG00000005656.10	Snx6	chr12	protein_coding	sorting nexin 6
chr12	54908198	54908311	-	54908198	54908454	A5SS	0.33	50	50	ENSMUST00000223450.2	ENSMUSG00000062929.9	Cfl2	chr12	protein_coding	cofilin 2, muscle
chr12	54908198	54908565	-	54908198	54908454	A5SS	0.33	50	50	ENSMUST00000223450.2	ENSMUSG00000062929.9	Cfl2	chr12	protein_coding	cofilin 2, muscle
chr12	54908618	54909196	-	54908618	54909529	A5SS	0.5	50	50	ENSMUST00000223450.2	ENSMUSG00000062929.9	Cfl2	chr12	protein_coding	cofilin 2, muscle
chr12	54908198	54908565	-	54908198	54908311	A5SS	0.33	50	50	ENSMUST00000078124.8	ENSMUSG00000062929.9	Cfl2	chr12	protein_coding	cofilin 2, muscle
chr12	54909894	54910062	+	54909609	54910062	A5SS	0.5	50	50	ENSMUST00000221447.2	ENSMUSG00000113209.2	1700081N11Rik	chr12	lncRNA	RIKEN cDNA 1700081N11 gene
chr12	55032592	55045751	-	55032592	55032947	5pMXE	0.33	50	50	ENSMUST00000038926.13	ENSMUSG00000035021.14	Baz1a	chr12	protein_coding	bromodomain adjacent to zinc finger domain 1A
chr12	55032592	55061090	-	55032592	55032947	5pMXE	0.33	50	50	ENSMUST00000038926.13	ENSMUSG00000035021.14	Baz1a	chr12	protein_coding	bromodomain adjacent to zinc finger domain 1A
chr12	54974409	54976312	-	54974498	54976312	A3SS	0.33	50	50	ENSMUST00000038926.13	ENSMUSG00000035021.14	Baz1a	chr12	protein_coding	bromodomain adjacent to zinc finger domain 1A
chr12	54974495	54976312	-	54974498	54976312	A3SS	0.33	50	50	ENSMUST00000038926.13	ENSMUSG00000035021.14	Baz1a	chr12	protein_coding	bromodomain adjacent to zinc finger domain 1A
chr12	54974409	54976312	-	54974495	54976312	A3SS	0.33	50	50	ENSMUST00000173433.8	ENSMUSG00000035021.14	Baz1a	chr12	protein_coding	bromodomain adjacent to zinc finger domain 1A
chr12	55032592	55045751	-	55032592	55061090	A5SS	0.33	50	50	ENSMUST00000172875.8	ENSMUSG00000035021.14	Baz1a	chr12	protein_coding	bromodomain adjacent to zinc finger domain 1A
chr12	55104137	55106160	-	55104137	55106242	A5SS	0.5	50	50	ENSMUST00000021406.6	ENSMUSG00000062198.6	2700097O09Rik	chr12	protein_coding	RIKEN cDNA 2700097O09 gene
chr12	55138118	55138492	+	55138118	55142600	A3SS	0.5	50	50	ENSMUST00000220578.2	ENSMUSG00000073079.7	Srp54a	chr12	protein_coding	signal recognition particle 54A
chr12	55127171	55135955	+	55127521	55135955	A5SS	0.5	50	50	ENSMUST00000220578.2	ENSMUSG00000073079.7	Srp54a	chr12	protein_coding	signal recognition particle 54A
chr12	55213178	55213552	+	55213178	55217660	A3SS	0.5	50	50	ENSMUST00000110708.4	ENSMUSG00000112449.2	Srp54b	chr12	protein_coding	signal recognition particle 54B
chr12	55340664	55345196	-	55340664;55344675	55344563;55345196	ES	0.5	50	50	ENSMUST00000021410.10	ENSMUSG00000021022.10	Ppp2r3c	chr12	protein_coding	protein phosphatase 2, regulatory subunit B'', gamma
chr12	55339499	55340567	-	55339359	55340567	A3SS	0.5	50	50	ENSMUST00000021410.10	ENSMUSG00000021022.10	Ppp2r3c	chr12	protein_coding	protein phosphatase 2, regulatory subunit B'', gamma
chr12	55350122	55353124	+	55346451	55353124	A5SS	0.33	50	50	ENSMUST00000184980.8	ENSMUSG00000021023.15	Prorp	chr12	protein_coding	protein only RNase P catalytic subunit
chr12	55351669	55353124	+	55346451	55353124	A5SS	0.33	50	50	ENSMUST00000184980.8	ENSMUSG00000021023.15	Prorp	chr12	protein_coding	protein only RNase P catalytic subunit
chr12	55351669	55355522	+	55353171	55355522	A5SS&ES	0.5	50	50	ENSMUST00000184980.8	ENSMUSG00000021023.15	Prorp	chr12	protein_coding	protein only RNase P catalytic subunit
chr12	55351669	55355522	+	55351669;55353171	55353124;55355522	ES	0.5	50	50	ENSMUST00000021411.15	ENSMUSG00000021023.15	Prorp	chr12	protein_coding	protein only RNase P catalytic subunit
chr12	55350122	55353124	+	55351669	55353124	A5SS	0.33	50	50	ENSMUST00000021411.15	ENSMUSG00000021023.15	Prorp	chr12	protein_coding	protein only RNase P catalytic subunit
chr12	55351669	55355522	+	55351669	55353124	3pMXE	0.5	50	50	ENSMUST00000184249.2	ENSMUSG00000021023.15	Prorp	chr12	protein_coding	protein only RNase P catalytic subunit
chr12	55445776	55454254	+	55431112	55454254	A5SS	0.5	50	50	ENSMUST00000163070.8	ENSMUSG00000021024.15	Psma6	chr12	protein_coding	proteasome subunit alpha 6
chr12	55445776	55454787	+	55454348	55454787	A5SS&ES	0.5	50	50	ENSMUST00000163070.8	ENSMUSG00000021024.15	Psma6	chr12	protein_coding	proteasome subunit alpha 6
chr12	55445776	55454787	+	55445776;55454348	55454254;55454787	ES	0.5	50	50	ENSMUST00000021412.9	ENSMUSG00000021024.15	Psma6	chr12	protein_coding	proteasome subunit alpha 6
chr12	55651053;55658888	55658858;55659419	-	55651053	55659419	cassetteExon	0.5	100	100	ENSMUST00000226244.2	ENSMUSG00000021027.18	Ralgapa1	chr12	protein_coding	Ral GTPase activating protein, alpha subunit 1
chr12	55769726;55781959	55781819;55784996	-	55769726	55784996	cassetteExon	0.5	100	100	ENSMUST00000226244.2	ENSMUSG00000021027.18	Ralgapa1	chr12	protein_coding	Ral GTPase activating protein, alpha subunit 1
chr12	55730790	55731272	-	55730875	55731272	A3SS	0.5	50	50	ENSMUST00000226244.2	ENSMUSG00000021027.18	Ralgapa1	chr12	protein_coding	Ral GTPase activating protein, alpha subunit 1
chr12	55659543	55689136	-	55659543	55687369	A5SS&ES	0.5	50	50	ENSMUST00000226244.2	ENSMUSG00000021027.18	Ralgapa1	chr12	protein_coding	Ral GTPase activating protein, alpha subunit 1
chr12	55766493	55769559	-	55766493	55768191	A5SS	0.5	50	50	ENSMUST00000226244.2	ENSMUSG00000021027.18	Ralgapa1	chr12	protein_coding	Ral GTPase activating protein, alpha subunit 1
chr12	55651056	55658858	-	55651053	55658858	A3SS	0.5	50	50	ENSMUST00000085385.7	ENSMUSG00000021027.18	Ralgapa1	chr12	protein_coding	Ral GTPase activating protein, alpha subunit 1
chr12	55651053	55659419	-	55658888	55659419	A3SS&ES	0.5	50	50	ENSMUST00000110687.8	ENSMUSG00000021027.18	Ralgapa1	chr12	protein_coding	Ral GTPase activating protein, alpha subunit 1
chr12	55651053	55659419	-	55651053	55658858	A5SS	0.5	50	50	ENSMUST00000219516.2	ENSMUSG00000021027.18	Ralgapa1	chr12	protein_coding	Ral GTPase activating protein, alpha subunit 1
chr12	55892148	55907873	+	55892148;55906972	55906876;55907873	ES	0.5	50	50	ENSMUST00000059250.8	ENSMUSG00000012076.9	Brms1l	chr12	protein_coding	breast cancer metastasis-suppressor 1-like
chr12	55908239	55912736	+	55908239;55909958	55909919;55912736	ES	0.5	50	50	ENSMUST00000059250.8	ENSMUSG00000012076.9	Brms1l	chr12	protein_coding	breast cancer metastasis-suppressor 1-like
chr12	55883430	55885627	+	55883430	55888356	A3SS	0.33	50	50	ENSMUST00000059250.8	ENSMUSG00000012076.9	Brms1l	chr12	protein_coding	breast cancer metastasis-suppressor 1-like
chr12	55883430	55886278	+	55883430	55888356	A3SS	0.33	50	50	ENSMUST00000059250.8	ENSMUSG00000012076.9	Brms1l	chr12	protein_coding	breast cancer metastasis-suppressor 1-like
chr12	55883430	55886278	+	55883430	55885627	3pMXE	0.33	50	50	ENSMUST00000217721.2	ENSMUSG00000012076.9	Brms1l	chr12	protein_coding	breast cancer metastasis-suppressor 1-like
chr12	55883430;55885843	55885627;55886278	+	55883430	55886278	cassetteExon	0.5	100	100	ENSMUST00000218779.2	ENSMUSG00000012076.9	Brms1l	chr12	protein_coding	breast cancer metastasis-suppressor 1-like
chr12	55883430	55886278	+	55885843	55886278	5pMXE	0.5	50	50	ENSMUST00000219337.2	ENSMUSG00000012076.9	Brms1l	chr12	protein_coding	breast cancer metastasis-suppressor 1-like
chr12	56389194	56392457	-	56389140	56392457	A3SS	0.5	50	50	ENSMUST00000021416.9	ENSMUSG00000021028.9	Mbip	chr12	protein_coding	MAP3K12 binding inhibitory protein 1
chr12	56537843	56539986	-	56537843	56538074	A5SS	0.5	50	50	ENSMUST00000219680.2	ENSMUSG00000112343.2	Sfta3-ps	chr12	lncRNA	surfactant associated 3, pseudogene
chr12	56537843;56538209	56538074;56539986	-	56537843	56539986	cassetteExon	0.5	100	100	ENSMUST00000218376.2	ENSMUSG00000112343.2	Sfta3-ps	chr12	lncRNA	surfactant associated 3, pseudogene
chr12	56558468;56560384	56560357;56575593	-	56558468	56575593	cassetteExon	0.5	100	100	ENSMUST00000218376.2	ENSMUSG00000112343.2	Sfta3-ps	chr12	lncRNA	surfactant associated 3, pseudogene
chr12	56588153	56614100	+	56588153	56653784	A3SS	0.5	50	50	ENSMUST00000182733.8	ENSMUSG00000098172.8	Gm26973	chr12	lncRNA	predicted gene, 26973
chr12	56584291	56588027	+	56582169	56588027	A5SS	0.5	50	50	ENSMUST00000182733.8	ENSMUSG00000098172.8	Gm26973	chr12	lncRNA	predicted gene, 26973
chr12	56637951	56638332	+	56637951	56638346	A3SS	0.5	50	50	ENSMUST00000173553.8	ENSMUSG00000092515.9	C87198	chr12	lncRNA	expressed sequence C87198
chr12	56638680	56640693	+	56638680	56640665	A3SS	0.5	50	50	ENSMUST00000173553.8	ENSMUSG00000092515.9	C87198	chr12	lncRNA	expressed sequence C87198
chr12	56774101	56785255	-	56765106	56785255	A3SS	0.5	50	50	ENSMUST00000044634.12	ENSMUSG00000035472.15	Slc25a21	chr12	protein_coding	solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21
chr12	56975098	57027077	-	56975098	57243658	A5SS	0.33	50	50	ENSMUST00000044634.12	ENSMUSG00000035472.15	Slc25a21	chr12	protein_coding	solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21
chr12	56975098	57205942	-	56975098	57243658	A5SS	0.33	50	50	ENSMUST00000044634.12	ENSMUSG00000035472.15	Slc25a21	chr12	protein_coding	solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21
chr12	56975098	57027077	-	56975098	57205942	A5SS	0.5	50	50	ENSMUST00000217690.2	ENSMUSG00000035472.15	Slc25a21	chr12	protein_coding	solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21
chr12	57277397	57350131	+	57277397	57285149	3pMXE	0.33	50	50	ENSMUST00000139049.2	ENSMUSG00000079104.5	Prps1l3	chr12	protein_coding	phosphoribosyl pyrophosphate synthetase 1-like 3
chr12	57277397	57352797	+	57277397	57285149	3pMXE	0.33	50	50	ENSMUST00000139049.2	ENSMUSG00000079104.5	Prps1l3	chr12	protein_coding	phosphoribosyl pyrophosphate synthetase 1-like 3
chr12	57277397	57352797	+	57277397;57350337	57350131;57352797	ES	0.5	50	50	ENSMUST00000153755.8	ENSMUSG00000047022.19	Mipol1	chr12	protein_coding	mirror-image polydactyly 1
chr12	57352923;57353372	57353259;57354145	+	57352923	57354145	cassetteExon	0.5	100	100	ENSMUST00000153755.8	ENSMUSG00000047022.19	Mipol1	chr12	protein_coding	mirror-image polydactyly 1
chr12	57329741	57350131	+	57277397	57350131	A5SS	0.5	50	50	ENSMUST00000153755.8	ENSMUSG00000047022.19	Mipol1	chr12	protein_coding	mirror-image polydactyly 1
chr12	57379245	57410913	+	57379245	57399506	3pMXE	0.5	50	50	ENSMUST00000150292.8	ENSMUSG00000047022.19	Mipol1	chr12	protein_coding	mirror-image polydactyly 1
chr12	57411020	57413236	+	57411020	57461102	A3SS	0.5	50	50	ENSMUST00000145003.8	ENSMUSG00000047022.19	Mipol1	chr12	protein_coding	mirror-image polydactyly 1
chr12	57503969	57507628	+	57503969	57543244	A3SS	0.5	50	50	ENSMUST00000123498.8	ENSMUSG00000047022.19	Mipol1	chr12	protein_coding	mirror-image polydactyly 1
chr12	57696305	57697768	+	57696305	57701550	A3SS	0.5	50	50	ENSMUST00000172939.8	ENSMUSG00000046782.15	Ttc6	chr12	protein_coding	tetratricopeptide repeat domain 6
chr12	59048841	59052045	-	59048841;59051362	59051276;59052045	ES	0.5	50	50	ENSMUST00000021375.12	ENSMUSG00000020986.14	Sec23a	chr12	protein_coding	SEC23 homolog A, COPII coat complex component
chr12	59025349	59029354	-	59025401	59029354	A3SS	0.5	50	50	ENSMUST00000021375.12	ENSMUSG00000020986.14	Sec23a	chr12	protein_coding	SEC23 homolog A, COPII coat complex component
chr12	59060840;59062994	59062861;59063652	+	59060840	59063652	cassetteExon	0.5	100	100	ENSMUST00000021379.8	ENSMUSG00000060121.16	Gemin2	chr12	protein_coding	gem nuclear organelle associated protein 2
chr12	59090462	59094909	-	59090462;59091132	59091039;59094909	ES	0.33	50	50	ENSMUST00000021380.10	ENSMUSG00000020993.10	Trappc6b	chr12	protein_coding	trafficking protein particle complex 6B
chr12	59098494;59106297	59106042;59107942	-	59098494	59107942	cassetteExon	0.5	100	100	ENSMUST00000021380.10	ENSMUSG00000020993.10	Trappc6b	chr12	protein_coding	trafficking protein particle complex 6B
chr12	59093985	59094909	-	59091132	59094909	A3SS	0.33	50	50	ENSMUST00000021380.10	ENSMUSG00000020993.10	Trappc6b	chr12	protein_coding	trafficking protein particle complex 6B
chr12	59097184	59098427	-	59097171	59098427	A3SS	0.5	50	50	ENSMUST00000021380.10	ENSMUSG00000020993.10	Trappc6b	chr12	protein_coding	trafficking protein particle complex 6B
chr12	59090462	59094909	-	59090462	59091039	5pMXE	0.5	50	50	ENSMUST00000217873.2	ENSMUSG00000020993.10	Trappc6b	chr12	protein_coding	trafficking protein particle complex 6B
chr12	59098494	59107942	-	59094992	59107942	A3SS	0.33	50	50	ENSMUST00000218686.2	ENSMUSG00000020993.10	Trappc6b	chr12	protein_coding	trafficking protein particle complex 6B
chr12	59106297	59107942	-	59094992	59107942	A3SS	0.33	50	50	ENSMUST00000218686.2	ENSMUSG00000020993.10	Trappc6b	chr12	protein_coding	trafficking protein particle complex 6B
chr12	59094992	59097054	-	59094992	59107942	A5SS	0.5	50	50	ENSMUST00000218686.2	ENSMUSG00000020993.10	Trappc6b	chr12	protein_coding	trafficking protein particle complex 6B
chr12	59093985	59094909	-	59090462	59094909	A3SS	0.33	50	50	ENSMUST00000217863.2	ENSMUSG00000020993.10	Trappc6b	chr12	protein_coding	trafficking protein particle complex 6B
chr12	59090462	59094909	-	59091132	59094909	3pMXE	0.33	50	50	ENSMUST00000218150.2	ENSMUSG00000020993.10	Trappc6b	chr12	protein_coding	trafficking protein particle complex 6B
chr12	59151347	59154622	+	59151347	59154625	A3SS	0.5	50	50	ENSMUST00000221093.2	ENSMUSG00000021000.18	Mia2	chr12	protein_coding	MIA SH3 domain ER export factor 2
chr12	59182981	59184484	+	59182981;59184388	59184367;59184484	ES	0.5	50	50	ENSMUST00000219140.3	ENSMUSG00000021000.18	Mia2	chr12	protein_coding	MIA SH3 domain ER export factor 2
chr12	59184572	59193122	+	59184572;59191556	59191485;59193122	ES	0.5	50	50	ENSMUST00000219140.3	ENSMUSG00000021000.18	Mia2	chr12	protein_coding	MIA SH3 domain ER export factor 2
chr12	59191556	59193633	+	59191556;59193148	59193122;59193633	ES	0.33	50	50	ENSMUST00000219140.3	ENSMUSG00000021000.18	Mia2	chr12	protein_coding	MIA SH3 domain ER export factor 2
chr12	59219378	59223117	+	59219378;59220974	59220892;59223117	ES	0.5	50	50	ENSMUST00000219140.3	ENSMUSG00000021000.18	Mia2	chr12	protein_coding	MIA SH3 domain ER export factor 2
chr12	59220974	59226636	+	59220974;59223245	59223117;59226636	ES	0.5	50	50	ENSMUST00000219140.3	ENSMUSG00000021000.18	Mia2	chr12	protein_coding	MIA SH3 domain ER export factor 2
chr12	59215821	59217048	+	59215821	59217044	A3SS	0.5	50	50	ENSMUST00000219140.3	ENSMUSG00000021000.18	Mia2	chr12	protein_coding	MIA SH3 domain ER export factor 2
chr12	59176682	59182850	+	59166593	59182850	A5SS	0.2	50	50	ENSMUST00000219140.3	ENSMUSG00000021000.18	Mia2	chr12	protein_coding	MIA SH3 domain ER export factor 2
chr12	59177681	59182850	+	59166593	59182850	A5SS	0.2	50	50	ENSMUST00000219140.3	ENSMUSG00000021000.18	Mia2	chr12	protein_coding	MIA SH3 domain ER export factor 2
chr12	59177905	59182850	+	59166593	59182850	A5SS	0.2	50	50	ENSMUST00000219140.3	ENSMUSG00000021000.18	Mia2	chr12	protein_coding	MIA SH3 domain ER export factor 2
chr12	59178390	59182850	+	59166593	59182850	A5SS	0.2	50	50	ENSMUST00000219140.3	ENSMUSG00000021000.18	Mia2	chr12	protein_coding	MIA SH3 domain ER export factor 2
chr12	59184572	59193633	+	59184572;59191556	59191485;59193633	ES	0.33	50	50	ENSMUST00000175912.8	ENSMUSG00000021000.18	Mia2	chr12	protein_coding	MIA SH3 domain ER export factor 2
chr12	59184572;59193148	59193122;59193633	+	59184572;59191556	59191485;59193633	MXE	0.5	100	100	ENSMUST00000175912.8	ENSMUSG00000021000.18	Mia2	chr12	protein_coding	MIA SH3 domain ER export factor 2
chr12	59177681	59182850	+	59176682	59182850	A5SS	0.2	50	50	ENSMUST00000175912.8	ENSMUSG00000021000.18	Mia2	chr12	protein_coding	MIA SH3 domain ER export factor 2
chr12	59177905	59182850	+	59176682	59182850	A5SS	0.2	50	50	ENSMUST00000175912.8	ENSMUSG00000021000.18	Mia2	chr12	protein_coding	MIA SH3 domain ER export factor 2
chr12	59178390	59182850	+	59176682	59182850	A5SS	0.2	50	50	ENSMUST00000175912.8	ENSMUSG00000021000.18	Mia2	chr12	protein_coding	MIA SH3 domain ER export factor 2
chr12	59184572;59193148	59193122;59193633	+	59184572	59193633	cassetteExon	0.5	100	100	ENSMUST00000176892.8	ENSMUSG00000021000.18	Mia2	chr12	protein_coding	MIA SH3 domain ER export factor 2
chr12	59219378;59223245	59223117;59226636	+	59219378;59220974	59220892;59226636	MXE	0.5	100	100	ENSMUST00000177225.8	ENSMUSG00000021000.18	Mia2	chr12	protein_coding	MIA SH3 domain ER export factor 2
chr12	59177905	59182850	+	59177681	59182850	A5SS	0.2	50	50	ENSMUST00000177225.8	ENSMUSG00000021000.18	Mia2	chr12	protein_coding	MIA SH3 domain ER export factor 2
chr12	59178390	59182850	+	59177681	59182850	A5SS	0.2	50	50	ENSMUST00000177225.8	ENSMUSG00000021000.18	Mia2	chr12	protein_coding	MIA SH3 domain ER export factor 2
chr12	59178390	59182850	+	59177905	59182850	A5SS	0.2	50	50	ENSMUST00000177460.8	ENSMUSG00000021000.18	Mia2	chr12	protein_coding	MIA SH3 domain ER export factor 2
chr12	59184572	59193122	+	59184572	59191485	3pMXE	0.33	50	50	ENSMUST00000175803.2	ENSMUSG00000021000.18	Mia2	chr12	protein_coding	MIA SH3 domain ER export factor 2
chr12	59184572	59193633	+	59184572	59191485	3pMXE	0.33	50	50	ENSMUST00000175803.2	ENSMUSG00000021000.18	Mia2	chr12	protein_coding	MIA SH3 domain ER export factor 2
chr12	59220974	59226636	+	59220974	59223117	A3SS&ES	0.5	50	50	ENSMUST00000176336.8	ENSMUSG00000021000.18	Mia2	chr12	protein_coding	MIA SH3 domain ER export factor 2
chr12	59219378	59223117	+	59219378	59220892	3pMXE	0.33	50	50	ENSMUST00000175659.8	ENSMUSG00000021000.18	Mia2	chr12	protein_coding	MIA SH3 domain ER export factor 2
chr12	59219378	59230973	+	59219378	59220892	3pMXE	0.33	50	50	ENSMUST00000175659.8	ENSMUSG00000021000.18	Mia2	chr12	protein_coding	MIA SH3 domain ER export factor 2
chr12	59219378	59223117	+	59219378	59230973	A3SS	0.33	50	50	ENSMUST00000177222.8	ENSMUSG00000021000.18	Mia2	chr12	protein_coding	MIA SH3 domain ER export factor 2
chr12	59226794	59230973	+	59219378	59230973	A5SS	0.5	50	50	ENSMUST00000177222.8	ENSMUSG00000021000.18	Mia2	chr12	protein_coding	MIA SH3 domain ER export factor 2
chr12	59252877	59265503	-	59252877	59265646	A5SS	0.5	50	50	ENSMUST00000043204.8	ENSMUSG00000035329.8	Fbxo33	chr12	protein_coding	F-box protein 33
chr12	61571616	61716266	+	61571616	61651752	3pMXE	0.5	50	50	ENSMUST00000130887.2	ENSMUSG00000035653.17	Lrfn5	chr12	protein_coding	leucine rich repeat and fibronectin type III domain containing 5
chr12	64968103	64970281	+	64968103;64969188	64969099;64970281	ES	0.33	50	50	ENSMUST00000058135.6	ENSMUSG00000047227.6	Gm527	chr12	protein_coding	predicted gene 527
chr12	64969542	64970281	+	64969188	64970281	A5SS	0.33	50	50	ENSMUST00000058135.6	ENSMUSG00000047227.6	Gm527	chr12	protein_coding	predicted gene 527
chr12	64968103;64969542	64969099;64970281	+	64968103	64970281	cassetteExon	0.5	100	100	ENSMUST00000220993.2	ENSMUSG00000047227.6	Gm527	chr12	protein_coding	predicted gene 527
chr12	64968103	64970281	+	64969542	64970281	5pMXE	0.33	50	50	ENSMUST00000220928.2	ENSMUSG00000047227.6	Gm527	chr12	protein_coding	predicted gene 527
chr12	65004511	65010075	-	65004511	65012183	A5SS	0.5	50	50	ENSMUST00000222508.2	ENSMUSG00000020948.10	Klhl28	chr12	protein_coding	kelch-like 28
chr12	65033264;65037864	65037715;65039319	+	65033264	65039319	cassetteExon	0.5	100	100	ENSMUST00000066296.9	ENSMUSG00000035614.12	Togaram1	chr12	protein_coding	TOG array regulator of axonemal microtubules 1
chr12	65014802	65017000	+	65014802	65023469	A3SS	0.5	50	50	ENSMUST00000066296.9	ENSMUSG00000035614.12	Togaram1	chr12	protein_coding	TOG array regulator of axonemal microtubules 1
chr12	65031130	65033167	+	65030340	65033167	A5SS	0.5	50	50	ENSMUST00000066296.9	ENSMUSG00000035614.12	Togaram1	chr12	protein_coding	TOG array regulator of axonemal microtubules 1
chr12	65090131;65090651	65090317;65090780	+	65090131	65090780	cassetteExon	0.5	100	100	ENSMUST00000120580.8	ENSMUSG00000035597.20	Prpf39	chr12	protein_coding	pre-mRNA processing factor 39
chr12	65090131;65090651	65090489;65090780	+	65090131	65090780	cassetteExon	0.5	100	100	ENSMUST00000120580.8	ENSMUSG00000035597.20	Prpf39	chr12	protein_coding	pre-mRNA processing factor 39
chr12	65090131;65090651	65090542;65090780	+	65090131	65090780	cassetteExon	0.5	100	100	ENSMUST00000120580.8	ENSMUSG00000035597.20	Prpf39	chr12	protein_coding	pre-mRNA processing factor 39
chr12	65102094;65102307	65102208;65102412	+	65102094	65102412	cassetteExon	0.5	100	100	ENSMUST00000120580.8	ENSMUSG00000035597.20	Prpf39	chr12	protein_coding	pre-mRNA processing factor 39
chr12	65102538	65103079	+	65102538	65103025	A3SS	0.5	50	50	ENSMUST00000120580.8	ENSMUSG00000035597.20	Prpf39	chr12	protein_coding	pre-mRNA processing factor 39
chr12	65103293	65104506	+	65103293	65104503	A3SS	0.5	50	50	ENSMUST00000120580.8	ENSMUSG00000035597.20	Prpf39	chr12	protein_coding	pre-mRNA processing factor 39
chr12	65102307	65102389	+	65102307	65102412	A3SS	0.5	50	50	ENSMUST00000220798.2	ENSMUSG00000035597.20	Prpf39	chr12	protein_coding	pre-mRNA processing factor 39
chr12	65090131	65090780	+	65090651	65090780	A5SS	0.5	50	50	ENSMUST00000220798.2	ENSMUSG00000035597.20	Prpf39	chr12	protein_coding	pre-mRNA processing factor 39
chr12	65090131	65090489	+	65090131;65090385	65090317;65090489	ES	0.5	50	50	ENSMUST00000129956.2	ENSMUSG00000035597.20	Prpf39	chr12	protein_coding	pre-mRNA processing factor 39
chr12	65090131	65090542	+	65090131	65090317	A3SS&ES	0.25	50	50	ENSMUST00000129956.2	ENSMUSG00000035597.20	Prpf39	chr12	protein_coding	pre-mRNA processing factor 39
chr12	65090131	65090489	+	65090131	65090542	A3SS	0.25	50	50	ENSMUST00000223341.2	ENSMUSG00000035597.20	Prpf39	chr12	protein_coding	pre-mRNA processing factor 39
chr12	65102094	65102412	+	65102094	65102208	A3SS&ES	0.5	50	50	ENSMUST00000220462.2	ENSMUSG00000035597.20	Prpf39	chr12	protein_coding	pre-mRNA processing factor 39
chr12	65090131	65090489	+	65090385	65090489	A5SS	0.5	50	50	ENSMUST00000220462.2	ENSMUSG00000035597.20	Prpf39	chr12	protein_coding	pre-mRNA processing factor 39
chr12	65113551	65116725	-	65113551;65115883	65115776;65116725	ES	0.33	50	50	ENSMUST00000220957.2	ENSMUSG00000020949.10	Fkbp3	chr12	protein_coding	FK506 binding protein 3
chr12	65109495	65110452	-	65109514	65110452	A3SS	0.5	50	50	ENSMUST00000220957.2	ENSMUSG00000020949.10	Fkbp3	chr12	protein_coding	FK506 binding protein 3
chr12	65115883	65116721	-	65115883	65116725	A5SS	0.5	50	50	ENSMUST00000220957.2	ENSMUSG00000020949.10	Fkbp3	chr12	protein_coding	FK506 binding protein 3
chr12	65112578	65116725	-	65115883	65116725	A3SS	0.33	50	50	ENSMUST00000222684.2	ENSMUSG00000020949.10	Fkbp3	chr12	protein_coding	FK506 binding protein 3
chr12	65113551	65116725	-	65115883	65116725	A3SS	0.33	50	50	ENSMUST00000222684.2	ENSMUSG00000020949.10	Fkbp3	chr12	protein_coding	FK506 binding protein 3
chr12	65112578	65116725	-	65112578	65113416	A5SS&ES	0.5	50	50	ENSMUST00000221166.2	ENSMUSG00000020949.10	Fkbp3	chr12	protein_coding	FK506 binding protein 3
chr12	65113551	65116725	-	65113551	65115776	A5SS&ES	0.5	50	50	ENSMUST00000221166.2	ENSMUSG00000020949.10	Fkbp3	chr12	protein_coding	FK506 binding protein 3
chr12	65116826	65120449	-	65116826	65120589	A5SS	0.5	50	50	ENSMUST00000221166.2	ENSMUSG00000020949.10	Fkbp3	chr12	protein_coding	FK506 binding protein 3
chr12	65110549	65115776	-	65110549	65112511	5pMXE	0.5	50	50	ENSMUST00000223167.2	ENSMUSG00000020949.10	Fkbp3	chr12	protein_coding	FK506 binding protein 3
chr12	65110549;65112578	65112511;65116725	-	65110549;65115883	65115776;65116725	MXE	0.5	100	100	ENSMUST00000220983.2	ENSMUSG00000020949.10	Fkbp3	chr12	protein_coding	FK506 binding protein 3
chr12	65113551	65115776	-	65110549	65115776	A3SS	0.5	50	50	ENSMUST00000220983.2	ENSMUSG00000020949.10	Fkbp3	chr12	protein_coding	FK506 binding protein 3
chr12	65112578;65113551	65113416;65116725	-	65112578	65116725	cassetteExon	0.5	100	100	ENSMUST00000221913.2	ENSMUSG00000020949.10	Fkbp3	chr12	protein_coding	FK506 binding protein 3
chr12	65110549;65115883	65115776;65116725	-	65110549;65113551	65112511;65116725	MXE	0.5	100	100	ENSMUST00000220730.2	ENSMUSG00000020949.10	Fkbp3	chr12	protein_coding	FK506 binding protein 3
chr12	65142679	65146022	+	65142679;65144282	65144076;65146022	ES	0.5	50	50	ENSMUST00000058889.5	ENSMUSG00000055884.9	Fancm	chr12	protein_coding	Fanconi anemia, complementation group M
chr12	65160792	65165058	+	65160792;65163238	65163107;65165058	ES	0.5	50	50	ENSMUST00000058889.5	ENSMUSG00000055884.9	Fancm	chr12	protein_coding	Fanconi anemia, complementation group M
chr12	65171960	65177049	+	65171960;65173580	65173289;65177049	ES	0.5	50	50	ENSMUST00000058889.5	ENSMUSG00000055884.9	Fancm	chr12	protein_coding	Fanconi anemia, complementation group M
chr12	65146226	65148294	+	65146226	65148335	A3SS	0.5	50	50	ENSMUST00000058889.5	ENSMUSG00000055884.9	Fancm	chr12	protein_coding	Fanconi anemia, complementation group M
chr12	65196324	65200580	-	65196324;65199604	65199462;65200580	ES	0.5	50	50	ENSMUST00000052201.9	ENSMUSG00000047534.18	Mis18bp1	chr12	protein_coding	MIS18 binding protein 1
chr12	65201623	65205169	-	65201623;65203839	65203766;65205169	ES	0.5	50	50	ENSMUST00000052201.9	ENSMUSG00000047534.18	Mis18bp1	chr12	protein_coding	MIS18 binding protein 1
chr12	65205635	65219223	-	65205635;65208802	65208177;65219223	ES	0.5	50	50	ENSMUST00000052201.9	ENSMUSG00000047534.18	Mis18bp1	chr12	protein_coding	MIS18 binding protein 1
chr12	65196324	65200580	-	65196324	65199462	A5SS	0.5	50	50	ENSMUST00000140391.8	ENSMUSG00000047534.18	Mis18bp1	chr12	protein_coding	MIS18 binding protein 1
chr12	65196324	65200580	-	65199604	65200580	3pMXE	0.5	50	50	ENSMUST00000221296.2	ENSMUSG00000047534.18	Mis18bp1	chr12	protein_coding	MIS18 binding protein 1
chr12	65208802	65219223	-	65205635	65219223	A3SS	0.5	50	50	ENSMUST00000221296.2	ENSMUSG00000047534.18	Mis18bp1	chr12	protein_coding	MIS18 binding protein 1
chr12	65205635	65208177	-	65205635	65219223	A5SS	0.5	50	50	ENSMUST00000221296.2	ENSMUSG00000047534.18	Mis18bp1	chr12	protein_coding	MIS18 binding protein 1
chr12	65273618	65274982	+	65274271	65274982	A5SS	0.33	50	50	ENSMUST00000046331.5	ENSMUSG00000035560.6	Wdr20rt	chr12	protein_coding	WD repeat domain 20, retrogene
chr12	65274097	65274982	+	65274271	65274982	A5SS	0.33	50	50	ENSMUST00000046331.5	ENSMUSG00000035560.6	Wdr20rt	chr12	protein_coding	WD repeat domain 20, retrogene
chr12	65274097	65274982	+	65273618	65274982	A5SS	0.33	50	50	ENSMUST00000221658.2	ENSMUSG00000035560.6	Wdr20rt	chr12	protein_coding	WD repeat domain 20, retrogene
chr12	66553596	66559956	-	66553596;66558784	66558764;66559956	ES	0.5	50	50	ENSMUST00000037181.16	ENSMUSG00000034912.19	Mdga2	chr12	protein_coding	MAM domain containing glycosylphosphatidylinositol anchor 2
chr12	66514512	66519976	-	66518377	66519976	A3SS	0.5	50	50	ENSMUST00000037181.16	ENSMUSG00000034912.19	Mdga2	chr12	protein_coding	MAM domain containing glycosylphosphatidylinositol anchor 2
chr12	66666760	66676679	-	66615786	66676679	A3SS	0.5	50	50	ENSMUST00000037181.16	ENSMUSG00000034912.19	Mdga2	chr12	protein_coding	MAM domain containing glycosylphosphatidylinositol anchor 2
chr12	66844571	66915441	-	66844576	66915441	A3SS	0.5	50	50	ENSMUST00000037181.16	ENSMUSG00000034912.19	Mdga2	chr12	protein_coding	MAM domain containing glycosylphosphatidylinositol anchor 2
chr12	67244733	67267744	-	66915580	67267744	A3SS	0.33	50	50	ENSMUST00000037181.16	ENSMUSG00000034912.19	Mdga2	chr12	protein_coding	MAM domain containing glycosylphosphatidylinositol anchor 2
chr12	67259575	67267744	-	66915580	67267744	A3SS	0.33	50	50	ENSMUST00000037181.16	ENSMUSG00000034912.19	Mdga2	chr12	protein_coding	MAM domain containing glycosylphosphatidylinositol anchor 2
chr12	66597403	66607643	-	66597403	66615517	A5SS	0.5	50	50	ENSMUST00000037181.16	ENSMUSG00000034912.19	Mdga2	chr12	protein_coding	MAM domain containing glycosylphosphatidylinositol anchor 2
chr12	66844576	66872410	-	66844576	66915441	A5SS	0.5	50	50	ENSMUST00000037181.16	ENSMUSG00000034912.19	Mdga2	chr12	protein_coding	MAM domain containing glycosylphosphatidylinositol anchor 2
chr12	67259575	67267744	-	67244733	67267744	A3SS	0.33	50	50	ENSMUST00000179577.3	ENSMUSG00000034912.19	Mdga2	chr12	protein_coding	MAM domain containing glycosylphosphatidylinositol anchor 2
chr12	69218734	69225354	+	69218734;69221887	69221166;69225354	ES	0.5	50	50	ENSMUST00000110621.3	ENSMUSG00000034883.10	Lrr1	chr12	protein_coding	leucine rich repeat protein 1
chr12	69218734	69221722	+	69218734	69221166	A3SS	0.33	50	50	ENSMUST00000110621.3	ENSMUSG00000034883.10	Lrr1	chr12	protein_coding	leucine rich repeat protein 1
chr12	69218734;69221887	69221722;69225354	+	69218734	69225354	cassetteExon	0.5	100	100	ENSMUST00000222520.2	ENSMUSG00000034883.10	Lrr1	chr12	protein_coding	leucine rich repeat protein 1
chr12	69218734	69221166	+	69218734	69225354	A3SS	0.33	50	50	ENSMUST00000222520.2	ENSMUSG00000034883.10	Lrr1	chr12	protein_coding	leucine rich repeat protein 1
chr12	69218734	69225354	+	69218734	69221722	3pMXE	0.33	50	50	ENSMUST00000222382.2	ENSMUSG00000034883.10	Lrr1	chr12	protein_coding	leucine rich repeat protein 1
chr12	69229939	69232628	-	69229939	69230439	5pMXE	0.33	50	50	ENSMUST00000110620.2	ENSMUSG00000049751.7	Rpl36al	chr12	protein_coding	ribosomal protein L36A-like
chr12	69229939	69230757	-	69229939	69230439	A5SS	0.33	50	50	ENSMUST00000110620.2	ENSMUSG00000049751.7	Rpl36al	chr12	protein_coding	ribosomal protein L36A-like
chr12	69229939	69232628	-	69229939	69230757	5pMXE	0.33	50	50	ENSMUST00000054544.7	ENSMUSG00000049751.7	Rpl36al	chr12	protein_coding	ribosomal protein L36A-like
chr12	69239725	69249681	-	69239725	69243266	5pMXE	0.5	50	50	ENSMUST00000223192.2	ENSMUSG00000113149.2	Gm49383	chr12	protein_coding	predicted gene, 49383
chr12	69237168	69239582	-	69232685	69239582	A3SS	0.5	50	50	ENSMUST00000223192.2	ENSMUSG00000113149.2	Gm49383	chr12	protein_coding	predicted gene, 49383
chr12	69248656	69249681	-	69239725	69249681	A3SS	0.5	50	50	ENSMUST00000222699.2	ENSMUSG00000113786.2	Gm49384	chr12	protein_coding	predicted gene, 49384
chr12	69249748	69250914	-	69249748	69250865	A5SS	0.5	50	50	ENSMUST00000222699.2	ENSMUSG00000113786.2	Gm49384	chr12	protein_coding	predicted gene, 49384
chr12	69288787	69289289	+	69288155	69289289	A5SS	0.5	50	50	ENSMUST00000146389.2	ENSMUSG00000051890.14	Klhdc1	chr12	protein_coding	kelch domain containing 1
chr12	69309995;69311746	69311564;69315016	+	69309995	69315016	cassetteExon	0.5	100	100	ENSMUST00000063445.13	ENSMUSG00000051890.14	Klhdc1	chr12	protein_coding	kelch domain containing 1
chr12	69288787	69289289	+	69288787	69297527	A3SS	0.5	50	50	ENSMUST00000063445.13	ENSMUSG00000051890.14	Klhdc1	chr12	protein_coding	kelch domain containing 1
chr12	69400716	69402804	-	69400716;69401546	69401421;69402804	ES	0.5	50	50	ENSMUST00000021368.10	ENSMUSG00000020982.10	Nemf	chr12	protein_coding	nuclear export mediator factor
chr12	69359415	69361190	-	69359440	69361190	A3SS	0.5	50	50	ENSMUST00000021368.10	ENSMUSG00000020982.10	Nemf	chr12	protein_coding	nuclear export mediator factor
chr12	69370670	69371006	-	69369124	69371006	A3SS	0.5	50	50	ENSMUST00000021368.10	ENSMUSG00000020982.10	Nemf	chr12	protein_coding	nuclear export mediator factor
chr12	69387830	69388047	-	69387850	69388047	A3SS	0.5	50	50	ENSMUST00000021368.10	ENSMUSG00000020982.10	Nemf	chr12	protein_coding	nuclear export mediator factor
chr12	69400666	69401421	-	69400716	69401421	A3SS	0.5	50	50	ENSMUST00000021368.10	ENSMUSG00000020982.10	Nemf	chr12	protein_coding	nuclear export mediator factor
chr12	69400716	69402804	-	69401546	69402804	A3SS&ES	0.5	50	50	ENSMUST00000220484.2	ENSMUSG00000020982.10	Nemf	chr12	protein_coding	nuclear export mediator factor
chr12	69512188	69513801	-	69512188	69514961	A5SS	0.5	50	50	ENSMUST00000223143.2	ENSMUSG00000113035.2	5830428M24Rik	chr12	lncRNA	RIKEN cDNA 5830428M24 gene
chr12	69521317	69522267	-	69521317	69522262	A5SS	0.5	50	50	ENSMUST00000223143.2	ENSMUSG00000113035.2	5830428M24Rik	chr12	lncRNA	RIKEN cDNA 5830428M24 gene
chr12	69629399	69629495	-	69629404	69629495	A3SS	0.5	50	50	ENSMUST00000058639.11	ENSMUSG00000049882.11	Vcpkmt	chr12	protein_coding	valosin containing protein lysine (K) methyltransferase
chr12	69624714	69626608	-	69624714	69626680	A5SS	0.5	50	50	ENSMUST00000058639.11	ENSMUSG00000049882.11	Vcpkmt	chr12	protein_coding	valosin containing protein lysine (K) methyltransferase
chr12	69629119	69629305	-	69629119	69629294	A5SS	0.5	50	50	ENSMUST00000058639.11	ENSMUSG00000049882.11	Vcpkmt	chr12	protein_coding	valosin containing protein lysine (K) methyltransferase
chr12	69664957	69673991	-	69664954	69673991	A3SS	0.5	50	50	ENSMUST00000035773.14	ENSMUSG00000034801.14	Sos2	chr12	protein_coding	SOS Ras/Rho guanine nucleotide exchange factor 2
chr12	69664957	69678834	-	69674089	69678834	A3SS&ES	0.5	50	50	ENSMUST00000035773.14	ENSMUSG00000034801.14	Sos2	chr12	protein_coding	SOS Ras/Rho guanine nucleotide exchange factor 2
chr12	69664957	69678834	-	69664957;69674089	69673991;69678834	ES	0.5	50	50	ENSMUST00000183277.8	ENSMUSG00000034801.14	Sos2	chr12	protein_coding	SOS Ras/Rho guanine nucleotide exchange factor 2
chr12	69768984	69771428	-	69768967	69771428	A3SS	0.5	50	50	ENSMUST00000021370.10	ENSMUSG00000020988.10	L2hgdh	chr12	protein_coding	L-2-hydroxyglutarate dehydrogenase
chr12	69771788	69784725	+	69771788;69772328	69772229;69784725	ES	0.33	50	50	ENSMUST00000220916.2	ENSMUSG00000054894.7	Dmac2l	chr12	protein_coding	distal membrane arm assembly complex 2 like
chr12	69772068	69784725	+	69772328	69784725	A5SS&ES	0.33	50	50	ENSMUST00000220916.2	ENSMUSG00000054894.7	Dmac2l	chr12	protein_coding	distal membrane arm assembly complex 2 like
chr12	69771788	69787673	+	69771788;69784835	69784725;69787673	ES	0.5	50	50	ENSMUST00000021372.6	ENSMUSG00000054894.7	Dmac2l	chr12	protein_coding	distal membrane arm assembly complex 2 like
chr12	69772068	69784725	+	69771788	69784725	A5SS	0.33	50	50	ENSMUST00000021372.6	ENSMUSG00000054894.7	Dmac2l	chr12	protein_coding	distal membrane arm assembly complex 2 like
chr12	69771788	69772229	+	69771788	69787673	A3SS	0.33	50	50	ENSMUST00000220539.2	ENSMUSG00000054894.7	Dmac2l	chr12	protein_coding	distal membrane arm assembly complex 2 like
chr12	69771788	69787673	+	69784835	69787673	A5SS&ES	0.5	50	50	ENSMUST00000220460.2	ENSMUSG00000054894.7	Dmac2l	chr12	protein_coding	distal membrane arm assembly complex 2 like
chr12	69771788	69784725	+	69772328	69784725	A5SS	0.33	50	50	ENSMUST00000222950.2	ENSMUSG00000054894.7	Dmac2l	chr12	protein_coding	distal membrane arm assembly complex 2 like
chr12	69837038	69837690	-	69837038	69837417	5pMXE	0.5	50	50	ENSMUST00000021377.5	ENSMUSG00000020990.6	Cdkl1	chr12	protein_coding	cyclin-dependent kinase-like 1 (CDC2-related kinase)
chr12	69903637	69939427	-	69903637;69921108	69921051;69939427	ES	0.5	50	50	ENSMUST00000110567.8	ENSMUSG00000034761.16	Map4k5	chr12	protein_coding	mitogen-activated protein kinase kinase kinase kinase 5
chr12	69865275	69869577	-	69867716	69869577	A3SS&ES	0.5	50	50	ENSMUST00000110567.8	ENSMUSG00000034761.16	Map4k5	chr12	protein_coding	mitogen-activated protein kinase kinase kinase kinase 5
chr12	69865272	69865583	-	69865272	69867714	A5SS	0.5	50	50	ENSMUST00000110567.8	ENSMUSG00000034761.16	Map4k5	chr12	protein_coding	mitogen-activated protein kinase kinase kinase kinase 5
chr12	69884847	69888694	-	69884847	69888751	A5SS	0.5	50	50	ENSMUST00000110567.8	ENSMUSG00000034761.16	Map4k5	chr12	protein_coding	mitogen-activated protein kinase kinase kinase kinase 5
chr12	69903637	69939427	-	69903637	69921051	5pMXE	0.5	50	50	ENSMUST00000124715.8	ENSMUSG00000034761.16	Map4k5	chr12	protein_coding	mitogen-activated protein kinase kinase kinase kinase 5
chr12	69994359	70000214	+	69994359;69996721	69996496;70000214	ES	0.5	50	50	ENSMUST00000222141.2	ENSMUSG00000021066.10	Atl1	chr12	protein_coding	atlastin GTPase 1
chr12	70007336	70010002	+	70006262	70010002	A5SS	0.5	50	50	ENSMUST00000222141.2	ENSMUSG00000021066.10	Atl1	chr12	protein_coding	atlastin GTPase 1
chr12	70087654	70091921	-	70087654;70091026	70088906;70091921	ES	0.5	50	50	ENSMUST00000085314.11	ENSMUSG00000021068.18	Nin	chr12	protein_coding	ninein
chr12	70067805;70069115	70069055;70072181	-	70067805	70072181	cassetteExon	0.5	100	100	ENSMUST00000085314.11	ENSMUSG00000021068.18	Nin	chr12	protein_coding	ninein
chr12	70076906;70077152	70077089;70077657	-	70076906	70077657	cassetteExon	0.5	100	100	ENSMUST00000085314.11	ENSMUSG00000021068.18	Nin	chr12	protein_coding	ninein
chr12	70125055;70126842	70126753;70137310	-	70125055	70137310	cassetteExon	0.5	100	100	ENSMUST00000085314.11	ENSMUSG00000021068.18	Nin	chr12	protein_coding	ninein
chr12	70066036	70067608	-	70064460	70067608	A3SS	0.5	50	50	ENSMUST00000085314.11	ENSMUSG00000021068.18	Nin	chr12	protein_coding	ninein
chr12	70120376	70124886	-	70109502	70124886	A3SS	0.5	50	50	ENSMUST00000085314.11	ENSMUSG00000021068.18	Nin	chr12	protein_coding	ninein
chr12	70067805	70072154	-	70067805	70072181	A5SS	0.33	50	50	ENSMUST00000085314.11	ENSMUSG00000021068.18	Nin	chr12	protein_coding	ninein
chr12	70149628	70149929	-	70149628	70160248	A5SS	0.2	50	50	ENSMUST00000222237.2	ENSMUSG00000021068.18	Nin	chr12	protein_coding	ninein
chr12	70149628	70157846	-	70149628	70160248	A5SS	0.2	50	50	ENSMUST00000222237.2	ENSMUSG00000021068.18	Nin	chr12	protein_coding	ninein
chr12	70149628	70158210	-	70149628	70160248	A5SS	0.2	50	50	ENSMUST00000222237.2	ENSMUSG00000021068.18	Nin	chr12	protein_coding	ninein
chr12	70149628	70158628	-	70149628	70160248	A5SS	0.2	50	50	ENSMUST00000222237.2	ENSMUSG00000021068.18	Nin	chr12	protein_coding	ninein
chr12	70067805	70072154	-	70067805	70069055	A5SS&ES	0.33	50	50	ENSMUST00000221579.2	ENSMUSG00000021068.18	Nin	chr12	protein_coding	ninein
chr12	70069115	70072154	-	70069115	70072181	A5SS	0.5	50	50	ENSMUST00000221579.2	ENSMUSG00000021068.18	Nin	chr12	protein_coding	ninein
chr12	70149628	70158628	-	70149628;70158256	70157846;70158628	ES	0.5	50	50	ENSMUST00000095666.13	ENSMUSG00000021068.18	Nin	chr12	protein_coding	ninein
chr12	70067805;70069115	70069055;70072154	-	70067805	70072154	cassetteExon	0.5	100	100	ENSMUST00000095666.13	ENSMUSG00000021068.18	Nin	chr12	protein_coding	ninein
chr12	70149628	70149929	-	70149628	70157846	A5SS	0.25	50	50	ENSMUST00000095666.13	ENSMUSG00000021068.18	Nin	chr12	protein_coding	ninein
chr12	70149628	70158210	-	70149628	70157846	A5SS	0.25	50	50	ENSMUST00000095666.13	ENSMUSG00000021068.18	Nin	chr12	protein_coding	ninein
chr12	70149628	70158628	-	70149628	70158210	5pMXE	0.2	50	50	ENSMUST00000220689.2	ENSMUSG00000021068.18	Nin	chr12	protein_coding	ninein
chr12	70091026	70091921	-	70087654	70091921	A3SS	0.5	50	50	ENSMUST00000220689.2	ENSMUSG00000021068.18	Nin	chr12	protein_coding	ninein
chr12	70067805	70072181	-	70067805	70069055	A5SS&ES	0.33	50	50	ENSMUST00000220689.2	ENSMUSG00000021068.18	Nin	chr12	protein_coding	ninein
chr12	70087654	70088906	-	70087654	70091921	A5SS	0.5	50	50	ENSMUST00000220689.2	ENSMUSG00000021068.18	Nin	chr12	protein_coding	ninein
chr12	70149628	70149929	-	70149628	70158210	A5SS	0.2	50	50	ENSMUST00000220689.2	ENSMUSG00000021068.18	Nin	chr12	protein_coding	ninein
chr12	70149628	70158628	-	70149628;70158256	70158210;70158628	ES	0.5	50	50	ENSMUST00000021468.14	ENSMUSG00000021068.18	Nin	chr12	protein_coding	ninein
chr12	70149628	70149929	-	70149628	70158628	A5SS	0.2	50	50	ENSMUST00000221486.2	ENSMUSG00000021068.18	Nin	chr12	protein_coding	ninein
chr12	70201039	70208225	+	70201039;70206243	70206116;70208225	ES	0.5	50	50	ENSMUST00000162570.8	ENSMUSG00000090121.11	Abhd12b	chr12	protein_coding	abhydrolase domain containing 12B
chr12	70213740	70216514	+	70213740;70216097	70215968;70216514	ES	0.5	50	50	ENSMUST00000162570.8	ENSMUSG00000090121.11	Abhd12b	chr12	protein_coding	abhydrolase domain containing 12B
chr12	70213740;70215852	70215807;70215968	+	70213740	70215968	cassetteExon	0.5	100	100	ENSMUST00000162570.8	ENSMUSG00000090121.11	Abhd12b	chr12	protein_coding	abhydrolase domain containing 12B
chr12	70201039	70210152	+	70201039	70206116	A3SS&ES	0.33	50	50	ENSMUST00000162570.8	ENSMUSG00000090121.11	Abhd12b	chr12	protein_coding	abhydrolase domain containing 12B
chr12	70201039	70210152	+	70201039;70208327	70208225;70210152	ES	0.5	50	50	ENSMUST00000182512.8	ENSMUSG00000090121.11	Abhd12b	chr12	protein_coding	abhydrolase domain containing 12B
chr12	70213740;70216097	70215807;70216514	+	70213740	70216514	cassetteExon	0.5	100	100	ENSMUST00000182782.8	ENSMUSG00000090121.11	Abhd12b	chr12	protein_coding	abhydrolase domain containing 12B
chr12	70269700	70277745	-	70269700	70274115	5pMXE	0.5	50	50	ENSMUST00000071250.13	ENSMUSG00000021069.18	Pygl	chr12	protein_coding	liver glycogen phosphorylase
chr12	70261290	70263337	-	70257932	70263337	A3SS	0.5	50	50	ENSMUST00000071250.13	ENSMUSG00000021069.18	Pygl	chr12	protein_coding	liver glycogen phosphorylase
chr12	70313266	70314008	-	70302000	70314008	A3SS	0.5	50	50	ENSMUST00000110522.10	ENSMUSG00000021071.18	Trim9	chr12	protein_coding	tripartite motif-containing 9
chr12	70313266	70314836	-	70314040	70314836	A3SS&ES	0.2	50	50	ENSMUST00000110522.10	ENSMUSG00000021071.18	Trim9	chr12	protein_coding	tripartite motif-containing 9
chr12	70314037	70314836	-	70314040	70314836	A3SS	0.2	50	50	ENSMUST00000110522.10	ENSMUSG00000021071.18	Trim9	chr12	protein_coding	tripartite motif-containing 9
chr12	70295201	70297731	-	70295201	70297785	A5SS	0.5	50	50	ENSMUST00000110522.10	ENSMUSG00000021071.18	Trim9	chr12	protein_coding	tripartite motif-containing 9
chr12	70339135	70362417	-	70339135	70393121	A5SS	0.5	50	50	ENSMUST00000110522.10	ENSMUSG00000021071.18	Trim9	chr12	protein_coding	tripartite motif-containing 9
chr12	70313266	70314836	-	70299258	70314836	A3SS	0.2	50	50	ENSMUST00000110520.10	ENSMUSG00000021071.18	Trim9	chr12	protein_coding	tripartite motif-containing 9
chr12	70314037	70314836	-	70299258	70314836	A3SS	0.2	50	50	ENSMUST00000110520.10	ENSMUSG00000021071.18	Trim9	chr12	protein_coding	tripartite motif-containing 9
chr12	70314040	70314836	-	70299258	70314836	A3SS	0.2	50	50	ENSMUST00000110520.10	ENSMUSG00000021071.18	Trim9	chr12	protein_coding	tripartite motif-containing 9
chr12	70299258	70301812	-	70299258	70314836	A5SS	0.5	50	50	ENSMUST00000110520.10	ENSMUSG00000021071.18	Trim9	chr12	protein_coding	tripartite motif-containing 9
chr12	70298034;70299258	70298794;70314836	-	70298034	70314836	cassetteExon	0.5	100	100	ENSMUST00000223160.2	ENSMUSG00000021071.18	Trim9	chr12	protein_coding	tripartite motif-containing 9
chr12	70313266	70314836	-	70298034	70314836	A3SS	0.2	50	50	ENSMUST00000223160.2	ENSMUSG00000021071.18	Trim9	chr12	protein_coding	tripartite motif-containing 9
chr12	70314037	70314836	-	70298034	70314836	A3SS	0.2	50	50	ENSMUST00000223160.2	ENSMUSG00000021071.18	Trim9	chr12	protein_coding	tripartite motif-containing 9
chr12	70314040	70314836	-	70298034	70314836	A3SS	0.2	50	50	ENSMUST00000223160.2	ENSMUSG00000021071.18	Trim9	chr12	protein_coding	tripartite motif-containing 9
chr12	70313266	70314836	-	70314037	70314836	A3SS&ES	0.2	50	50	ENSMUST00000221294.2	ENSMUSG00000021071.18	Trim9	chr12	protein_coding	tripartite motif-containing 9
chr12	70313266	70314836	-	70313266;70314040	70314008;70314836	ES	0.33	50	50	ENSMUST00000167755.3	ENSMUSG00000021071.18	Trim9	chr12	protein_coding	tripartite motif-containing 9
chr12	70313266	70314767	-	70313266	70314008	A5SS&ES	0.33	50	50	ENSMUST00000167755.3	ENSMUSG00000021071.18	Trim9	chr12	protein_coding	tripartite motif-containing 9
chr12	70313266;70314037	70314008;70314836	-	70313266	70314836	cassetteExon	0.5	100	100	ENSMUST00000221370.2	ENSMUSG00000021071.18	Trim9	chr12	protein_coding	tripartite motif-containing 9
chr12	70313266	70314767	-	70313266	70314836	A5SS	0.33	50	50	ENSMUST00000221370.2	ENSMUSG00000021071.18	Trim9	chr12	protein_coding	tripartite motif-containing 9
chr12	70505681	70507253	+	70505681;70507164	70507119;70507253	ES	0.5	50	50	ENSMUST00000021471.13	ENSMUSG00000021072.13	Tmx1	chr12	protein_coding	thioredoxin-related transmembrane protein 1
chr12	70505681	70507253	+	70507164	70507253	5pMXE	0.5	50	50	ENSMUST00000160865.2	ENSMUSG00000021072.13	Tmx1	chr12	protein_coding	thioredoxin-related transmembrane protein 1
chr12	70872907	70910651	+	70872347	70910651	A5SS	0.5	50	50	ENSMUST00000057859.9	ENSMUSG00000048285.10	Frmd6	chr12	protein_coding	FERM domain containing 6
chr12	70918405	70919265	+	70910916	70919265	A5SS	0.5	50	50	ENSMUST00000057859.9	ENSMUSG00000048285.10	Frmd6	chr12	protein_coding	FERM domain containing 6
chr12	70924013	70925191	+	70924037	70925191	A5SS	0.5	50	50	ENSMUST00000057859.9	ENSMUSG00000048285.10	Frmd6	chr12	protein_coding	FERM domain containing 6
chr12	70984805	70989033	+	70984805;70987644	70987572;70989033	ES	0.5	50	50	ENSMUST00000021479.6	ENSMUSG00000021076.7	Actr10	chr12	protein_coding	ARP10 actin-related protein 10
chr12	70986877	70987572	+	70984805	70987572	A5SS	0.5	50	50	ENSMUST00000021479.6	ENSMUSG00000021076.7	Actr10	chr12	protein_coding	ARP10 actin-related protein 10
chr12	71021541	71030093	+	71021541;71025589	71025507;71030093	ES	0.33	50	50	ENSMUST00000160027.8	ENSMUSG00000060073.10	Psma3	chr12	protein_coding	proteasome subunit alpha 3
chr12	71025589	71030098	+	71025589	71030093	A3SS	0.33	50	50	ENSMUST00000160027.8	ENSMUSG00000060073.10	Psma3	chr12	protein_coding	proteasome subunit alpha 3
chr12	71025613	71030093	+	71025589	71030093	A5SS	0.33	50	50	ENSMUST00000160027.8	ENSMUSG00000060073.10	Psma3	chr12	protein_coding	proteasome subunit alpha 3
chr12	71021541	71030093	+	71021541;71025613	71025507;71030093	ES	0.33	50	50	ENSMUST00000162626.8	ENSMUSG00000060073.10	Psma3	chr12	protein_coding	proteasome subunit alpha 3
chr12	71025589	71035198	+	71033709	71035198	A5SS&ES	0.5	50	50	ENSMUST00000162626.8	ENSMUSG00000060073.10	Psma3	chr12	protein_coding	proteasome subunit alpha 3
chr12	71021541;71025589	71025507;71035198	+	71021541;71033709	71030093;71035198	MXE	0.5	100	100	ENSMUST00000160864.8	ENSMUSG00000060073.10	Psma3	chr12	protein_coding	proteasome subunit alpha 3
chr12	71021541	71030093	+	71021541	71025507	A3SS&ES	0.5	50	50	ENSMUST00000162851.8	ENSMUSG00000060073.10	Psma3	chr12	protein_coding	proteasome subunit alpha 3
chr12	71025589	71030093	+	71025589	71035198	A3SS	0.33	50	50	ENSMUST00000162851.8	ENSMUSG00000060073.10	Psma3	chr12	protein_coding	proteasome subunit alpha 3
chr12	71025589	71030098	+	71025589	71035198	A3SS	0.33	50	50	ENSMUST00000162851.8	ENSMUSG00000060073.10	Psma3	chr12	protein_coding	proteasome subunit alpha 3
chr12	71037305	71039787	+	71037305	71041125	A3SS	0.5	50	50	ENSMUST00000162898.2	ENSMUSG00000060073.10	Psma3	chr12	protein_coding	proteasome subunit alpha 3
chr12	71040344	71041125	+	71037305	71041125	A5SS	0.5	50	50	ENSMUST00000162898.2	ENSMUSG00000060073.10	Psma3	chr12	protein_coding	proteasome subunit alpha 3
chr12	71084139	71091798	+	71084139;71086745	71086613;71091798	ES	0.5	50	50	ENSMUST00000046305.12	ENSMUSG00000048118.18	Arid4a	chr12	protein_coding	AT rich interactive domain 4A (RBP1-like)
chr12	71095348	71106836	+	71094134	71106836	A5SS	0.5	50	50	ENSMUST00000046305.12	ENSMUSG00000048118.18	Arid4a	chr12	protein_coding	AT rich interactive domain 4A (RBP1-like)
chr12	71158354;71158523	71158480;71164300	+	71158354	71164300	cassetteExon	0.5	100	100	ENSMUST00000220834.2	ENSMUSG00000021078.6	Tomm20l	chr12	protein_coding	translocase of outer mitochondrial membrane 20-like
chr12	71158354	71164300	+	71158523	71164300	A5SS	0.5	50	50	ENSMUST00000221962.2	ENSMUSG00000021078.6	Tomm20l	chr12	protein_coding	translocase of outer mitochondrial membrane 20-like
chr12	71173171;71178860	71178775;71183329	-	71173171	71183329	cassetteExon	0.5	100	100	ENSMUST00000021486.10	ENSMUSG00000021079.17	Timm9	chr12	protein_coding	translocase of inner mitochondrial membrane 9
chr12	71170376	71172236	-	71170460	71172236	A3SS	0.5	50	50	ENSMUST00000021486.10	ENSMUSG00000021079.17	Timm9	chr12	protein_coding	translocase of inner mitochondrial membrane 9
chr12	71179416	71183329	-	71173171	71183329	A3SS	0.16	50	50	ENSMUST00000021486.10	ENSMUSG00000021079.17	Timm9	chr12	protein_coding	translocase of inner mitochondrial membrane 9
chr12	71179532	71183329	-	71173171	71183329	A3SS	0.16	50	50	ENSMUST00000021486.10	ENSMUSG00000021079.17	Timm9	chr12	protein_coding	translocase of inner mitochondrial membrane 9
chr12	71179572	71183329	-	71173171	71183329	A3SS	0.16	50	50	ENSMUST00000021486.10	ENSMUSG00000021079.17	Timm9	chr12	protein_coding	translocase of inner mitochondrial membrane 9
chr12	71180771	71183329	-	71173171	71183329	A3SS	0.16	50	50	ENSMUST00000021486.10	ENSMUSG00000021079.17	Timm9	chr12	protein_coding	translocase of inner mitochondrial membrane 9
chr12	71170460	71172183	-	71170460	71172236	A5SS	0.5	50	50	ENSMUST00000021486.10	ENSMUSG00000021079.17	Timm9	chr12	protein_coding	translocase of inner mitochondrial membrane 9
chr12	71178860	71183329	-	71178860;71179416	71179281;71183329	ES	0.16	50	50	ENSMUST00000166120.9	ENSMUSG00000021079.17	Timm9	chr12	protein_coding	translocase of inner mitochondrial membrane 9
chr12	71179532	71183329	-	71179416	71183329	A3SS	0.16	50	50	ENSMUST00000166120.9	ENSMUSG00000021079.17	Timm9	chr12	protein_coding	translocase of inner mitochondrial membrane 9
chr12	71179572	71183329	-	71179416	71183329	A3SS	0.16	50	50	ENSMUST00000166120.9	ENSMUSG00000021079.17	Timm9	chr12	protein_coding	translocase of inner mitochondrial membrane 9
chr12	71180771	71183329	-	71179416	71183329	A3SS	0.16	50	50	ENSMUST00000166120.9	ENSMUSG00000021079.17	Timm9	chr12	protein_coding	translocase of inner mitochondrial membrane 9
chr12	71178860;71179532	71179281;71183329	-	71178860	71183329	cassetteExon	0.5	100	100	ENSMUST00000221892.2	ENSMUSG00000021079.17	Timm9	chr12	protein_coding	translocase of inner mitochondrial membrane 9
chr12	71178860;71179572	71179281;71183329	-	71178860	71183329	cassetteExon	0.5	100	100	ENSMUST00000221892.2	ENSMUSG00000021079.17	Timm9	chr12	protein_coding	translocase of inner mitochondrial membrane 9
chr12	71180771	71183329	-	71178860	71183329	A3SS	0.16	50	50	ENSMUST00000221892.2	ENSMUSG00000021079.17	Timm9	chr12	protein_coding	translocase of inner mitochondrial membrane 9
chr12	71179572	71183329	-	71179532	71183329	A3SS	0.16	50	50	ENSMUST00000221367.2	ENSMUSG00000021079.17	Timm9	chr12	protein_coding	translocase of inner mitochondrial membrane 9
chr12	71180771	71183329	-	71179532	71183329	A3SS	0.16	50	50	ENSMUST00000221367.2	ENSMUSG00000021079.17	Timm9	chr12	protein_coding	translocase of inner mitochondrial membrane 9
chr12	71180771	71183329	-	71179572	71183329	A3SS	0.16	50	50	ENSMUST00000220482.2	ENSMUSG00000021079.17	Timm9	chr12	protein_coding	translocase of inner mitochondrial membrane 9
chr12	71197238;71198274	71198159;71199424	+	71197238	71199424	cassetteExon	0.5	100	100	ENSMUST00000149564.8	ENSMUSG00000034601.18	2700049A03Rik	chr12	protein_coding	RIKEN cDNA 2700049A03 gene
chr12	71241240	71262816	+	71241240	71289718	A3SS	0.5	50	50	ENSMUST00000045907.16	ENSMUSG00000034601.18	2700049A03Rik	chr12	protein_coding	RIKEN cDNA 2700049A03 gene
chr12	71266073	71289718	+	71241240	71289718	A5SS	0.5	50	50	ENSMUST00000045907.16	ENSMUSG00000034601.18	2700049A03Rik	chr12	protein_coding	RIKEN cDNA 2700049A03 gene
chr12	71360714	71363834	+	71360714	71363945	A3SS	0.5	50	50	ENSMUST00000061273.12	ENSMUSG00000044548.12	Dact1	chr12	protein_coding	dishevelled-binding antagonist of beta-catenin 1
chr12	71587530	71588884	+	71580726	71588884	A5SS	0.5	50	50	ENSMUST00000222756.2	ENSMUSG00000113630.2	4930404H11Rik	chr12	lncRNA	RIKEN cDNA 4930404H11 gene
chr12	71999333	72006580	+	71999333;72005547	72005521;72006580	ES	0.5	50	50	ENSMUST00000223272.2	ENSMUSG00000034574.11	Daam1	chr12	protein_coding	dishevelled associated activator of morphogenesis 1
chr12	71878105	71942501	+	71877970	71942501	A5SS	0.33	50	50	ENSMUST00000223272.2	ENSMUSG00000034574.11	Daam1	chr12	protein_coding	dishevelled associated activator of morphogenesis 1
chr12	71936612	71942501	+	71877970	71942501	A5SS	0.33	50	50	ENSMUST00000223272.2	ENSMUSG00000034574.11	Daam1	chr12	protein_coding	dishevelled associated activator of morphogenesis 1
chr12	71936612	71942501	+	71878105	71942501	A5SS	0.33	50	50	ENSMUST00000221971.2	ENSMUSG00000034574.11	Daam1	chr12	protein_coding	dishevelled associated activator of morphogenesis 1
chr12	72126430	72131305	-	72126430	72131423	A5SS	0.5	50	50	ENSMUST00000019862.3	ENSMUSG00000019718.9	L3hypdh	chr12	protein_coding	L-3-hydroxyproline dehydratase (trans-)
chr12	72132619	72136089	+	72132447	72136089	A5SS	0.33	50	50	ENSMUST00000125764.8	ENSMUSG00000005078.17	Jkamp	chr12	protein_coding	JNK1/MAPK8-associated membrane protein
chr12	72132957	72136089	+	72132447	72136089	A5SS	0.33	50	50	ENSMUST00000125764.8	ENSMUSG00000005078.17	Jkamp	chr12	protein_coding	JNK1/MAPK8-associated membrane protein
chr12	72132957	72136089	+	72132619	72136089	A5SS	0.33	50	50	ENSMUST00000132371.8	ENSMUSG00000005078.17	Jkamp	chr12	protein_coding	JNK1/MAPK8-associated membrane protein
chr12	72132957	72136107	+	72132957	72136089	A3SS	0.5	50	50	ENSMUST00000057257.10	ENSMUSG00000005078.17	Jkamp	chr12	protein_coding	JNK1/MAPK8-associated membrane protein
chr12	72270313	72283303	-	72270313	72282435	5pMXE	0.33	50	50	ENSMUST00000150156.2	ENSMUSG00000021087.19	Rtn1	chr12	protein_coding	reticulon 1
chr12	72270313	72350431	-	72270313	72282435	5pMXE	0.33	50	50	ENSMUST00000150156.2	ENSMUSG00000021087.19	Rtn1	chr12	protein_coding	reticulon 1
chr12	72270313	72283303	-	72270313	72350431	A5SS	0.33	50	50	ENSMUST00000078505.14	ENSMUSG00000021087.19	Rtn1	chr12	protein_coding	reticulon 1
chr12	72510275	72510610	+	72510275	72510607	A3SS	0.5	50	50	ENSMUST00000161284.3	ENSMUSG00000021090.17	Lrrc9	chr12	protein_coding	leucine rich repeat containing 9
chr12	72488875	72496094	+	72488942	72496094	A5SS	0.33	50	50	ENSMUST00000161284.3	ENSMUSG00000021090.17	Lrrc9	chr12	protein_coding	leucine rich repeat containing 9
chr12	72489244	72496094	+	72488942	72496094	A5SS	0.33	50	50	ENSMUST00000161284.3	ENSMUSG00000021090.17	Lrrc9	chr12	protein_coding	leucine rich repeat containing 9
chr12	72553200	72557110	+	72553200;72555816	72555745;72557110	ES	0.5	50	50	ENSMUST00000162159.8	ENSMUSG00000021090.17	Lrrc9	chr12	protein_coding	leucine rich repeat containing 9
chr12	72550303	72553060	+	72550299	72553060	A5SS	0.5	50	50	ENSMUST00000162159.8	ENSMUSG00000021090.17	Lrrc9	chr12	protein_coding	leucine rich repeat containing 9
chr12	72489244	72496094	+	72488875	72496094	A5SS	0.33	50	50	ENSMUST00000221360.2	ENSMUSG00000021090.17	Lrrc9	chr12	protein_coding	leucine rich repeat containing 9
chr12	72553200	72555745	+	72553200	72576918	A3SS	0.33	50	50	ENSMUST00000220791.2	ENSMUSG00000021090.17	Lrrc9	chr12	protein_coding	leucine rich repeat containing 9
chr12	72553200	72557110	+	72553200	72576918	A3SS	0.33	50	50	ENSMUST00000220791.2	ENSMUSG00000021090.17	Lrrc9	chr12	protein_coding	leucine rich repeat containing 9
chr12	72567076	72576918	+	72553200	72576918	A5SS	0.5	50	50	ENSMUST00000220791.2	ENSMUSG00000021090.17	Lrrc9	chr12	protein_coding	leucine rich repeat containing 9
chr12	72668728	72675501	-	72668728;72674989	72674837;72675501	ES	0.5	50	50	ENSMUST00000222413.2	ENSMUSG00000109482.3	Gm4756	chr12	protein_coding	predicted gene 4756
chr12	72655768	72666196	-	72624656	72666196	A3SS	0.33	50	50	ENSMUST00000222413.2	ENSMUSG00000109482.3	Gm4756	chr12	protein_coding	predicted gene 4756
chr12	72659436	72666196	-	72624656	72666196	A3SS	0.33	50	50	ENSMUST00000222413.2	ENSMUSG00000109482.3	Gm4756	chr12	protein_coding	predicted gene 4756
chr12	72668728	72675448	-	72668728	72674837	A5SS&ES	0.33	50	50	ENSMUST00000222413.2	ENSMUSG00000109482.3	Gm4756	chr12	protein_coding	predicted gene 4756
chr12	72668728	72696330	-	72668728	72675501	5pMXE	0.25	50	50	ENSMUST00000207585.2	ENSMUSG00000109482.3	Gm4756	chr12	protein_coding	predicted gene 4756
chr12	72659436	72666196	-	72655768	72666196	A3SS	0.5	50	50	ENSMUST00000207585.2	ENSMUSG00000109482.3	Gm4756	chr12	protein_coding	predicted gene 4756
chr12	72655768	72658490	-	72655768	72666196	A5SS	0.5	50	50	ENSMUST00000207585.2	ENSMUSG00000109482.3	Gm4756	chr12	protein_coding	predicted gene 4756
chr12	72668728	72675448	-	72668728	72675501	A5SS	0.25	50	50	ENSMUST00000207585.2	ENSMUSG00000109482.3	Gm4756	chr12	protein_coding	predicted gene 4756
chr12	72668728	72674837	-	72668728	72696330	A5SS	0.25	50	50	ENSMUST00000208307.2	ENSMUSG00000109482.3	Gm4756	chr12	protein_coding	predicted gene 4756
chr12	72668728	72675448	-	72668728	72696330	A5SS	0.25	50	50	ENSMUST00000208307.2	ENSMUSG00000109482.3	Gm4756	chr12	protein_coding	predicted gene 4756
chr12	72703313	72706118	-	72703313	72704102	A5SS&ES	0.5	50	50	ENSMUST00000221750.2	ENSMUSG00000021094.11	Dhrs7	chr12	protein_coding	dehydrogenase/reductase (SDR family) member 7
chr12	72704208	72706118	-	72704208	72706040	A5SS	0.5	50	50	ENSMUST00000221750.2	ENSMUSG00000021094.11	Dhrs7	chr12	protein_coding	dehydrogenase/reductase (SDR family) member 7
chr12	72703313	72706118	-	72703313;72704208	72704102;72706118	ES	0.5	50	50	ENSMUST00000021512.11	ENSMUSG00000021094.11	Dhrs7	chr12	protein_coding	dehydrogenase/reductase (SDR family) member 7
chr12	72807587	72830457	+	72804465	72830457	A5SS	0.33	50	50	ENSMUST00000221628.2	ENSMUSG00000021096.12	Ppm1a	chr12	protein_coding	protein phosphatase 1A, magnesium dependent, alpha isoform
chr12	72808405	72830457	+	72804465	72830457	A5SS	0.33	50	50	ENSMUST00000221628.2	ENSMUSG00000021096.12	Ppm1a	chr12	protein_coding	protein phosphatase 1A, magnesium dependent, alpha isoform
chr12	72831310	72833446	+	72830567	72833446	A5SS	0.5	50	50	ENSMUST00000221628.2	ENSMUSG00000021096.12	Ppm1a	chr12	protein_coding	protein phosphatase 1A, magnesium dependent, alpha isoform
chr12	72808405	72830457	+	72807587	72830457	A5SS	0.33	50	50	ENSMUST00000222790.2	ENSMUSG00000021096.12	Ppm1a	chr12	protein_coding	protein phosphatase 1A, magnesium dependent, alpha isoform
chr12	72833563	72837407	+	72833563	72840486	A3SS	0.5	50	50	ENSMUST00000222896.2	ENSMUSG00000021096.12	Ppm1a	chr12	protein_coding	protein phosphatase 1A, magnesium dependent, alpha isoform
chr12	72839609	72840486	+	72833563	72840486	A5SS	0.5	50	50	ENSMUST00000222896.2	ENSMUSG00000021096.12	Ppm1a	chr12	protein_coding	protein phosphatase 1A, magnesium dependent, alpha isoform
chr12	72939753	72945261	-	72939753;72941819	72941758;72945261	ES	0.5	50	50	ENSMUST00000110489.9	ENSMUSG00000021098.15	4930447C04Rik	chr12	protein_coding	RIKEN cDNA 4930447C04 gene
chr12	72945569	72949990	-	72945569;72949263	72949187;72949990	ES	0.5	50	50	ENSMUST00000110489.9	ENSMUSG00000021098.15	4930447C04Rik	chr12	protein_coding	RIKEN cDNA 4930447C04 gene
chr12	72960048	72963448	-	72960048;72962256	72962130;72963448	ES	0.5	50	50	ENSMUST00000110489.9	ENSMUSG00000021098.15	4930447C04Rik	chr12	protein_coding	RIKEN cDNA 4930447C04 gene
chr12	72953053	72954595	-	72953056	72954595	A3SS	0.5	50	50	ENSMUST00000110489.9	ENSMUSG00000021098.15	4930447C04Rik	chr12	protein_coding	RIKEN cDNA 4930447C04 gene
chr12	72950108	72952959	-	72950108	72952965	A5SS	0.5	50	50	ENSMUST00000110489.9	ENSMUSG00000021098.15	4930447C04Rik	chr12	protein_coding	RIKEN cDNA 4930447C04 gene
chr12	72963653	72964482	-	72963653	72964282	A5SS&ES	0.5	50	50	ENSMUST00000110489.9	ENSMUSG00000021098.15	4930447C04Rik	chr12	protein_coding	RIKEN cDNA 4930447C04 gene
chr12	72963653	72984441	-	72963653	72964482	5pMXE	0.2	50	50	ENSMUST00000044000.12	ENSMUSG00000021098.15	4930447C04Rik	chr12	protein_coding	RIKEN cDNA 4930447C04 gene
chr12	72963653	72986097	-	72963653	72964482	5pMXE	0.2	50	50	ENSMUST00000044000.12	ENSMUSG00000021098.15	4930447C04Rik	chr12	protein_coding	RIKEN cDNA 4930447C04 gene
chr12	72953053	72955286	-	72953053	72954595	A5SS&ES	0.5	50	50	ENSMUST00000044000.12	ENSMUSG00000021098.15	4930447C04Rik	chr12	protein_coding	RIKEN cDNA 4930447C04 gene
chr12	72963653	72964560	-	72963653	72964482	A5SS	0.2	50	50	ENSMUST00000044000.12	ENSMUSG00000021098.15	4930447C04Rik	chr12	protein_coding	RIKEN cDNA 4930447C04 gene
chr12	72963653	72984441	-	72963653	72964560	5pMXE	0.2	50	50	ENSMUST00000131033.8	ENSMUSG00000021098.15	4930447C04Rik	chr12	protein_coding	RIKEN cDNA 4930447C04 gene
chr12	72963653	72986097	-	72963653	72964560	5pMXE	0.2	50	50	ENSMUST00000131033.8	ENSMUSG00000021098.15	4930447C04Rik	chr12	protein_coding	RIKEN cDNA 4930447C04 gene
chr12	72963653	72964282	-	72963653	72964560	A5SS	0.2	50	50	ENSMUST00000131033.8	ENSMUSG00000021098.15	4930447C04Rik	chr12	protein_coding	RIKEN cDNA 4930447C04 gene
chr12	72963653	72964282	-	72963653	72986097	A5SS	0.2	50	50	ENSMUST00000136075.8	ENSMUSG00000021098.15	4930447C04Rik	chr12	protein_coding	RIKEN cDNA 4930447C04 gene
chr12	72963653	72984441	-	72963653	72986097	A5SS	0.2	50	50	ENSMUST00000136075.8	ENSMUSG00000021098.15	4930447C04Rik	chr12	protein_coding	RIKEN cDNA 4930447C04 gene
chr12	72963653	72964282	-	72963653	72984441	A5SS	0.2	50	50	ENSMUST00000130635.8	ENSMUSG00000021098.15	4930447C04Rik	chr12	protein_coding	RIKEN cDNA 4930447C04 gene
chr12	72992867;72998698	72998525;73012329	+	72992867	73012329	cassetteExon	0.5	100	100	ENSMUST00000181194.2	ENSMUSG00000097010.3	Gm26709	chr12	lncRNA	predicted gene, 26709
chr12	72992867	73012329	+	72992867	72998525	A3SS&ES	0.5	50	50	ENSMUST00000223260.2	ENSMUSG00000097010.3	Gm26709	chr12	lncRNA	predicted gene, 26709
chr12	72998698	73012329	+	72998698	73008514	A3SS&ES	0.5	50	50	ENSMUST00000223260.2	ENSMUSG00000097010.3	Gm26709	chr12	lncRNA	predicted gene, 26709
chr12	73090603	73100433	-	73090603	73092641	5pMXE	0.33	50	50	ENSMUST00000050029.8	ENSMUSG00000051367.9	Six1	chr12	protein_coding	sine oculis-related homeobox 1
chr12	73090603	73091788	-	73090603	73092641	A5SS	0.33	50	50	ENSMUST00000050029.8	ENSMUSG00000051367.9	Six1	chr12	protein_coding	sine oculis-related homeobox 1
chr12	73090603	73091788	-	73090603	73100433	A5SS	0.33	50	50	ENSMUST00000176091.2	ENSMUSG00000051367.9	Six1	chr12	protein_coding	sine oculis-related homeobox 1
chr12	73214926	73225979	+	73214926;73217441	73217368;73225979	ES	0.5	50	50	ENSMUST00000187549.7	ENSMUSG00000021103.13	Mnat1	chr12	protein_coding	menage a trois 1
chr12	73235039	73265795	+	73235039	73277443	A3SS	0.5	50	50	ENSMUST00000187549.7	ENSMUSG00000021103.13	Mnat1	chr12	protein_coding	menage a trois 1
chr12	73327406	73329386	-	73327406;73328430	73327779;73329386	ES	0.5	50	50	ENSMUST00000116420.4	ENSMUSG00000034442.12	Trmt5	chr12	protein_coding	TRM5 tRNA methyltransferase 5
chr12	73332049;73332749	73332678;73333458	-	73332049	73333458	cassetteExon	0.5	100	100	ENSMUST00000116420.4	ENSMUSG00000034442.12	Trmt5	chr12	protein_coding	TRM5 tRNA methyltransferase 5
chr12	73328430	73329386	-	73327406	73329386	A3SS	0.5	50	50	ENSMUST00000220701.2	ENSMUSG00000034442.12	Trmt5	chr12	protein_coding	TRM5 tRNA methyltransferase 5
chr12	73327406	73327779	-	73327406	73329386	A5SS	0.5	50	50	ENSMUST00000220701.2	ENSMUSG00000034442.12	Trmt5	chr12	protein_coding	TRM5 tRNA methyltransferase 5
chr12	73339007	73365751	+	73339007;73356971	73356919;73365751	ES	0.25	50	50	ENSMUST00000140523.8	ENSMUSG00000044712.16	Slc38a6	chr12	protein_coding	solute carrier family 38, member 6
chr12	73339007;73340573	73340473;73356919	+	73339007	73356919	cassetteExon	0.5	100	100	ENSMUST00000140523.8	ENSMUSG00000044712.16	Slc38a6	chr12	protein_coding	solute carrier family 38, member 6
chr12	73339007;73340573	73340473;73365751	+	73339007;73356971	73356919;73365751	MXE	0.5	100	100	ENSMUST00000140523.8	ENSMUSG00000044712.16	Slc38a6	chr12	protein_coding	solute carrier family 38, member 6
chr12	73356971	73357764	+	73356971	73365751	A3SS	0.5	50	50	ENSMUST00000140523.8	ENSMUSG00000044712.16	Slc38a6	chr12	protein_coding	solute carrier family 38, member 6
chr12	73365790	73374519	+	73365790	73376754	A3SS	0.5	50	50	ENSMUST00000140523.8	ENSMUSG00000044712.16	Slc38a6	chr12	protein_coding	solute carrier family 38, member 6
chr12	73384342	73386648	+	73384342	73388182	A3SS	0.5	50	50	ENSMUST00000140523.8	ENSMUSG00000044712.16	Slc38a6	chr12	protein_coding	solute carrier family 38, member 6
chr12	73333928	73335167	+	73333806	73335167	A5SS	0.5	50	50	ENSMUST00000140523.8	ENSMUSG00000044712.16	Slc38a6	chr12	protein_coding	solute carrier family 38, member 6
chr12	73359298	73365751	+	73356971	73365751	A5SS	0.25	50	50	ENSMUST00000140523.8	ENSMUSG00000044712.16	Slc38a6	chr12	protein_coding	solute carrier family 38, member 6
chr12	73339007	73365751	+	73339007;73340573	73340473;73365751	ES	0.25	50	50	ENSMUST00000126488.8	ENSMUSG00000044712.16	Slc38a6	chr12	protein_coding	solute carrier family 38, member 6
chr12	73340573;73356971	73356919;73365751	+	73340573	73365751	cassetteExon	0.5	100	100	ENSMUST00000126488.8	ENSMUSG00000044712.16	Slc38a6	chr12	protein_coding	solute carrier family 38, member 6
chr12	73359298	73365751	+	73340573	73365751	A5SS	0.25	50	50	ENSMUST00000126488.8	ENSMUSG00000044712.16	Slc38a6	chr12	protein_coding	solute carrier family 38, member 6
chr12	73356971	73365751	+	73356971;73359298	73357764;73365751	ES	0.25	50	50	ENSMUST00000058139.14	ENSMUSG00000044712.16	Slc38a6	chr12	protein_coding	solute carrier family 38, member 6
chr12	73359298	73365751	+	73339007	73365751	A5SS	0.25	50	50	ENSMUST00000122920.8	ENSMUSG00000044712.16	Slc38a6	chr12	protein_coding	solute carrier family 38, member 6
chr12	73411114	73418154	-	73411114	73412802	A5SS&ES	0.5	50	50	ENSMUST00000070425.6	ENSMUSG00000056359.7	D830013O20Rik	chr12	lncRNA	RIKEN cDNA D830013O20 gene
chr12	73632299	73696066	+	73632299;73640938	73640842;73696066	ES	0.5	50	50	ENSMUST00000221153.2	ENSMUSG00000021108.19	Prkch	chr12	protein_coding	protein kinase C, eta
chr12	73806515	73807343	+	73806515	73822164	A3SS	0.5	50	50	ENSMUST00000221153.2	ENSMUSG00000021108.19	Prkch	chr12	protein_coding	protein kinase C, eta
chr12	73840309	73846683	+	73842669	73846683	A5SS&ES	0.5	50	50	ENSMUST00000223088.2	ENSMUSG00000113321.2	Gm8075	chr12	lncRNA	predicted gene 8075
chr12	73981786	73996398	-	73896713	73996398	A3SS	0.5	50	50	ENSMUST00000221427.2	ENSMUSG00000087700.3	Gm15283	chr12	lncRNA	predicted gene 15283
chr12	73890146	73910249	-	73890146	73896421	A5SS&ES	0.5	50	50	ENSMUST00000221427.2	ENSMUSG00000087700.3	Gm15283	chr12	lncRNA	predicted gene 15283
chr12	73987405	73988462	+	73987405	73988504	A3SS	0.5	50	50	ENSMUST00000110461.8	ENSMUSG00000021109.14	Hif1a	chr12	protein_coding	hypoxia inducible factor 1, alpha subunit
chr12	73955098	73973331	+	73948272	73973331	A5SS	0.5	50	50	ENSMUST00000110461.8	ENSMUSG00000021109.14	Hif1a	chr12	protein_coding	hypoxia inducible factor 1, alpha subunit
chr12	73984574	74014682	+	73984574	73986303	3pMXE	0.5	50	50	ENSMUST00000157041.2	ENSMUSG00000021109.14	Hif1a	chr12	protein_coding	hypoxia inducible factor 1, alpha subunit
chr12	74011520	74014682	+	73984574	74014682	A5SS	0.33	50	50	ENSMUST00000221833.2	ENSMUSG00000114046.2	Snapc1l	chr12	protein_coding	small nuclear RNA activating complex, polypeptide 1 like
chr12	74014211	74014682	+	73984574	74014682	A5SS	0.33	50	50	ENSMUST00000221833.2	ENSMUSG00000114046.2	Snapc1l	chr12	protein_coding	small nuclear RNA activating complex, polypeptide 1 like
chr12	74011520	74014682	+	74011520;74014211	74014121;74014682	ES	0.5	50	50	ENSMUST00000222025.2	ENSMUSG00000021113.6	Snapc1	chr12	protein_coding	small nuclear RNA activating complex, polypeptide 1
chr12	74021935	74029412	+	74021935	74029252	A3SS&ES	0.5	50	50	ENSMUST00000021532.6	ENSMUSG00000021113.6	Snapc1	chr12	protein_coding	small nuclear RNA activating complex, polypeptide 1
chr12	74029353	74029491	+	74029353	74030637	A3SS	0.5	50	50	ENSMUST00000021532.6	ENSMUSG00000021113.6	Snapc1	chr12	protein_coding	small nuclear RNA activating complex, polypeptide 1
chr12	74176325	74201951	+	74176325	74269356	A3SS	0.25	50	50	ENSMUST00000221220.2	ENSMUSG00000044912.12	Syt16	chr12	protein_coding	synaptotagmin XVI
chr12	74176325	74207165	+	74176325	74269356	A3SS	0.25	50	50	ENSMUST00000221220.2	ENSMUSG00000044912.12	Syt16	chr12	protein_coding	synaptotagmin XVI
chr12	74176325	74208830	+	74176325	74269356	A3SS	0.25	50	50	ENSMUST00000221220.2	ENSMUSG00000044912.12	Syt16	chr12	protein_coding	synaptotagmin XVI
chr12	74209650	74269356	+	74176325	74269356	A5SS	0.5	50	50	ENSMUST00000221220.2	ENSMUSG00000044912.12	Syt16	chr12	protein_coding	synaptotagmin XVI
chr12	74269568	74275989	+	74269613	74275989	A5SS	0.5	50	50	ENSMUST00000221220.2	ENSMUSG00000044912.12	Syt16	chr12	protein_coding	synaptotagmin XVI
chr12	74176325	74269356	+	74176325;74209650	74208830;74269356	ES	0.5	50	50	ENSMUST00000110451.4	ENSMUSG00000044912.12	Syt16	chr12	protein_coding	synaptotagmin XVI
chr12	74176325;74207246	74207165;74208830	+	74176325	74208830	cassetteExon	0.5	100	100	ENSMUST00000110451.4	ENSMUSG00000044912.12	Syt16	chr12	protein_coding	synaptotagmin XVI
chr12	74176325	74201951	+	74176325	74208830	A3SS	0.25	50	50	ENSMUST00000110451.4	ENSMUSG00000044912.12	Syt16	chr12	protein_coding	synaptotagmin XVI
chr12	74176325	74201951	+	74176325	74207165	A3SS	0.33	50	50	ENSMUST00000221973.2	ENSMUSG00000044912.12	Syt16	chr12	protein_coding	synaptotagmin XVI
chr12	74331230;74332412	74332289;74342097	+	74331230	74342097	cassetteExon	0.5	100	100	ENSMUST00000095617.3	ENSMUSG00000071265.11	1700086L19Rik	chr12	transcribed_unitary_pseudogene	RIKEN cDNA 1700086L19 gene
chr12	74335708	74342097	+	74331230	74342097	A5SS	0.33	50	50	ENSMUST00000095617.3	ENSMUSG00000071265.11	1700086L19Rik	chr12	transcribed_unitary_pseudogene	RIKEN cDNA 1700086L19 gene
chr12	74332412;74335708	74335482;74342097	+	74332412	74342097	cassetteExon	0.5	100	100	ENSMUST00000186463.7	ENSMUSG00000071265.11	1700086L19Rik	chr12	transcribed_unitary_pseudogene	RIKEN cDNA 1700086L19 gene
chr12	74889600	74895473	+	74889600;74895182	74895144;74895473	ES	0.5	50	50	ENSMUST00000221968.2	ENSMUSG00000113974.2	4930442G10Rik	chr12	lncRNA	RIKEN cDNA 4930442G10 gene
chr12	75355775	75438453	+	75355775;75422180	75422122;75438453	ES	0.5	50	50	ENSMUST00000118602.8	ENSMUSG00000046768.14	Rhoj	chr12	protein_coding	ras homolog family member J
chr12	75440838	75446881	+	75440838	75441196	3pMXE	0.5	50	50	ENSMUST00000118602.8	ENSMUSG00000046768.14	Rhoj	chr12	protein_coding	ras homolog family member J
chr12	75355775	75438453	+	75355775	75422122	3pMXE	0.5	50	50	ENSMUST00000146096.2	ENSMUSG00000046768.14	Rhoj	chr12	protein_coding	ras homolog family member J
chr12	75531998	75562376	-	75531998;75540289	75540188;75562376	ES	0.5	50	50	ENSMUST00000021447.9	ENSMUSG00000021051.11	Ppp2r5e	chr12	protein_coding	protein phosphatase 2, regulatory subunit B', epsilon
chr12	75540289	75639943	-	75540289;75562572	75562376;75639943	ES	0.5	50	50	ENSMUST00000021447.9	ENSMUSG00000021051.11	Ppp2r5e	chr12	protein_coding	protein phosphatase 2, regulatory subunit B', epsilon
chr12	75562572	75596388	-	75562572	75639943	A5SS	0.5	50	50	ENSMUST00000021447.9	ENSMUSG00000021051.11	Ppp2r5e	chr12	protein_coding	protein phosphatase 2, regulatory subunit B', epsilon
chr12	75531998;75540289	75540188;75639943	-	75531998;75562572	75562376;75639943	MXE	0.5	100	100	ENSMUST00000220035.2	ENSMUSG00000021051.11	Ppp2r5e	chr12	protein_coding	protein phosphatase 2, regulatory subunit B', epsilon
chr12	75531998	75562376	-	75540289	75562376	3pMXE	0.5	50	50	ENSMUST00000218716.2	ENSMUSG00000021051.11	Ppp2r5e	chr12	protein_coding	protein phosphatase 2, regulatory subunit B', epsilon
chr12	75540289	75639943	-	75562572	75639943	3pMXE	0.5	50	50	ENSMUST00000218930.2	ENSMUSG00000021051.11	Ppp2r5e	chr12	protein_coding	protein phosphatase 2, regulatory subunit B', epsilon
chr12	75680282;75687790	75687578;75716246	-	75680282	75716246	cassetteExon	0.5	100	100	ENSMUST00000062370.9	ENSMUSG00000045690.9	Wdr89	chr12	protein_coding	WD repeat domain 89
chr12	75865252	75900795	+	75864962	75900795	A5SS	0.25	50	50	ENSMUST00000142864.8	ENSMUSG00000063450.15	Syne2	chr12	protein_coding	spectrin repeat containing, nuclear envelope 2
chr12	75874566	75900795	+	75864962	75900795	A5SS	0.25	50	50	ENSMUST00000142864.8	ENSMUSG00000063450.15	Syne2	chr12	protein_coding	spectrin repeat containing, nuclear envelope 2
chr12	75899847	75900795	+	75864962	75900795	A5SS	0.25	50	50	ENSMUST00000142864.8	ENSMUSG00000063450.15	Syne2	chr12	protein_coding	spectrin repeat containing, nuclear envelope 2
chr12	76134687	76141816	+	76134687;76141242	76141055;76141816	ES	0.5	50	50	ENSMUST00000044217.16	ENSMUSG00000063450.15	Syne2	chr12	protein_coding	spectrin repeat containing, nuclear envelope 2
chr12	75865252;75874566	75874376;75900795	+	75865252	75900795	cassetteExon	0.5	100	100	ENSMUST00000044217.16	ENSMUSG00000063450.15	Syne2	chr12	protein_coding	spectrin repeat containing, nuclear envelope 2
chr12	76146286;76146870	76146802;76147766	+	76146286	76147766	cassetteExon	0.5	100	100	ENSMUST00000044217.16	ENSMUSG00000063450.15	Syne2	chr12	protein_coding	spectrin repeat containing, nuclear envelope 2
chr12	75957954	75959077	+	75957954	75959080	A3SS	0.5	50	50	ENSMUST00000044217.16	ENSMUSG00000063450.15	Syne2	chr12	protein_coding	spectrin repeat containing, nuclear envelope 2
chr12	76069918	76070793	+	76069918	76070790	A3SS	0.5	50	50	ENSMUST00000044217.16	ENSMUSG00000063450.15	Syne2	chr12	protein_coding	spectrin repeat containing, nuclear envelope 2
chr12	76152891	76154202	+	76152891	76154258	A3SS	0.5	50	50	ENSMUST00000044217.16	ENSMUSG00000063450.15	Syne2	chr12	protein_coding	spectrin repeat containing, nuclear envelope 2
chr12	76154989	76155638	+	76154989	76155061	A3SS&ES	0.33	50	50	ENSMUST00000044217.16	ENSMUSG00000063450.15	Syne2	chr12	protein_coding	spectrin repeat containing, nuclear envelope 2
chr12	76154989	76155641	+	76154989	76155061	A3SS&ES	0.33	50	50	ENSMUST00000044217.16	ENSMUSG00000063450.15	Syne2	chr12	protein_coding	spectrin repeat containing, nuclear envelope 2
chr12	75899847	75900795	+	75865252	75900795	A5SS	0.25	50	50	ENSMUST00000044217.16	ENSMUSG00000063450.15	Syne2	chr12	protein_coding	spectrin repeat containing, nuclear envelope 2
chr12	76128757	76134525	+	76122682	76134525	A5SS	0.5	50	50	ENSMUST00000044217.16	ENSMUSG00000063450.15	Syne2	chr12	protein_coding	spectrin repeat containing, nuclear envelope 2
chr12	76154989	76155641	+	76154989	76155638	A3SS	0.33	50	50	ENSMUST00000143031.8	ENSMUSG00000063450.15	Syne2	chr12	protein_coding	spectrin repeat containing, nuclear envelope 2
chr12	75899847	75900795	+	75874566	75900795	A5SS	0.33	50	50	ENSMUST00000150317.8	ENSMUSG00000063450.15	Syne2	chr12	protein_coding	spectrin repeat containing, nuclear envelope 2
chr12	76134687	76141816	+	76134687	76141055	3pMXE	0.5	50	50	ENSMUST00000131480.8	ENSMUSG00000063450.15	Syne2	chr12	protein_coding	spectrin repeat containing, nuclear envelope 2
chr12	76180717	76192018	-	76180717;76188247	76188109;76192018	ES	0.5	50	50	ENSMUST00000110421.9	ENSMUSG00000021055.15	Esr2	chr12	protein_coding	estrogen receptor 2 (beta)
chr12	76180717;76187025	76186972;76188109	-	76180717	76188109	cassetteExon	0.5	100	100	ENSMUST00000110421.9	ENSMUSG00000021055.15	Esr2	chr12	protein_coding	estrogen receptor 2 (beta)
chr12	76180717	76186972	-	76180717	76192018	A5SS	0.33	50	50	ENSMUST00000133564.9	ENSMUSG00000021055.15	Esr2	chr12	protein_coding	estrogen receptor 2 (beta)
chr12	76268513	76276152	-	76268513	76286231	A5SS	0.5	50	50	ENSMUST00000021453.6	ENSMUSG00000021056.9	Tex21	chr12	protein_coding	testis expressed gene 21
chr12	76292132	76293337	-	76292132	76293429	A5SS	0.5	50	50	ENSMUST00000021453.6	ENSMUSG00000021056.9	Tex21	chr12	protein_coding	testis expressed gene 21
chr12	76302318	76326178	+	76302318;76317276	76317192;76326178	ES	0.5	50	50	ENSMUST00000021443.7	ENSMUSG00000021048.8	Mthfd1	chr12	protein_coding	methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase
chr12	76339911	76340165	+	76337891	76340165	A5SS	0.5	50	50	ENSMUST00000021443.7	ENSMUSG00000021048.8	Mthfd1	chr12	protein_coding	methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase
chr12	76302318	76326178	+	76302318	76317192	3pMXE	0.5	50	50	ENSMUST00000218110.2	ENSMUSG00000021048.8	Mthfd1	chr12	protein_coding	methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase
chr12	76371900	76374340	+	76371763	76374340	A5SS	0.5	50	50	ENSMUST00000154078.3	ENSMUSG00000021057.16	Akap5	chr12	protein_coding	A kinase (PRKA) anchor protein 5
chr12	76402842	76415619	-	76402842	76403880	5pMXE	0.2	50	50	ENSMUST00000176102.8	ENSMUSG00000056459.15	Zbtb25	chr12	protein_coding	zinc finger and BTB domain containing 25
chr12	76402842	76416108	-	76402842	76403880	5pMXE	0.2	50	50	ENSMUST00000176102.8	ENSMUSG00000056459.15	Zbtb25	chr12	protein_coding	zinc finger and BTB domain containing 25
chr12	76402842	76416112	-	76402842	76403880	5pMXE	0.2	50	50	ENSMUST00000176102.8	ENSMUSG00000056459.15	Zbtb25	chr12	protein_coding	zinc finger and BTB domain containing 25
chr12	76402842	76416214	-	76402842	76403880	5pMXE	0.2	50	50	ENSMUST00000176102.8	ENSMUSG00000056459.15	Zbtb25	chr12	protein_coding	zinc finger and BTB domain containing 25
chr12	76396973	76402663	-	76397047	76402663	A3SS	0.5	50	50	ENSMUST00000176102.8	ENSMUSG00000056459.15	Zbtb25	chr12	protein_coding	zinc finger and BTB domain containing 25
chr12	76402842	76415619	-	76402842	76416112	A5SS	0.2	50	50	ENSMUST00000167011.8	ENSMUSG00000056459.15	Zbtb25	chr12	protein_coding	zinc finger and BTB domain containing 25
chr12	76402842	76416108	-	76402842	76416112	A5SS	0.2	50	50	ENSMUST00000167011.8	ENSMUSG00000056459.15	Zbtb25	chr12	protein_coding	zinc finger and BTB domain containing 25
chr12	76402842	76416214	-	76402842	76416112	A5SS	0.2	50	50	ENSMUST00000167011.8	ENSMUSG00000056459.15	Zbtb25	chr12	protein_coding	zinc finger and BTB domain containing 25
chr12	76402842	76416108	-	76402842	76415619	5pMXE	0.2	50	50	ENSMUST00000176509.8	ENSMUSG00000056459.15	Zbtb25	chr12	protein_coding	zinc finger and BTB domain containing 25
chr12	76402842	76416214	-	76402842	76415619	5pMXE	0.2	50	50	ENSMUST00000176509.8	ENSMUSG00000056459.15	Zbtb25	chr12	protein_coding	zinc finger and BTB domain containing 25
chr12	76402842	76416108	-	76402842	76416214	A5SS	0.2	50	50	ENSMUST00000176278.8	ENSMUSG00000056459.15	Zbtb25	chr12	protein_coding	zinc finger and BTB domain containing 25
chr12	76465766	76474659	+	76465766;76473609	76473523;76474659	ES	0.5	50	50	ENSMUST00000063977.9	ENSMUSG00000052221.9	Ppp1r36	chr12	protein_coding	protein phosphatase 1, regulatory subunit 36
chr12	76475707	76478912	+	76475707	76482917	A3SS	0.5	50	50	ENSMUST00000063977.9	ENSMUSG00000052221.9	Ppp1r36	chr12	protein_coding	protein phosphatase 1, regulatory subunit 36
chr12	76580592	76606903	+	76578047	76606903	A5SS	0.25	50	50	ENSMUST00000217730.2	ENSMUSG00000052609.10	Plekhg3	chr12	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 3
chr12	76593960	76606903	+	76578047	76606903	A5SS	0.25	50	50	ENSMUST00000217730.2	ENSMUSG00000052609.10	Plekhg3	chr12	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 3
chr12	76594641	76606903	+	76578047	76606903	A5SS	0.25	50	50	ENSMUST00000217730.2	ENSMUSG00000052609.10	Plekhg3	chr12	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 3
chr12	76613040	76618378	+	76613040;76617950	76617861;76618378	ES	0.5	50	50	ENSMUST00000075249.6	ENSMUSG00000052609.10	Plekhg3	chr12	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 3
chr12	76609077;76610295	76610274;76610529	+	76609077	76610529	cassetteExon	0.5	100	100	ENSMUST00000075249.6	ENSMUSG00000052609.10	Plekhg3	chr12	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 3
chr12	76618416	76618821	+	76618416	76618824	A3SS	0.5	50	50	ENSMUST00000075249.6	ENSMUSG00000052609.10	Plekhg3	chr12	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 3
chr12	76593960	76606903	+	76580592	76606903	A5SS	0.25	50	50	ENSMUST00000075249.6	ENSMUSG00000052609.10	Plekhg3	chr12	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 3
chr12	76594641	76606903	+	76580592	76606903	A5SS	0.25	50	50	ENSMUST00000075249.6	ENSMUSG00000052609.10	Plekhg3	chr12	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 3
chr12	76619519	76620021	+	76619432	76620021	A5SS	0.5	50	50	ENSMUST00000075249.6	ENSMUSG00000052609.10	Plekhg3	chr12	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 3
chr12	76593960;76594641	76594563;76606903	+	76593960	76606903	cassetteExon	0.5	100	100	ENSMUST00000218380.2	ENSMUSG00000052609.10	Plekhg3	chr12	protein_coding	pleckstrin homology domain containing, family G (with RhoGef domain) member 3
chr12	76593926	76594150	-	76593945	76594150	A3SS	0.5	50	50	ENSMUST00000219353.2	ENSMUSG00000112388.2	AI463170	chr12	lncRNA	expressed sequence AI463170
chr12	76812412	76822368	+	76812412;76820167	76820032;76822368	ES	0.5	50	50	ENSMUST00000041262.14	ENSMUSG00000090258.8	Churc1	chr12	protein_coding	churchill domain containing 1
chr12	76820167	76829587	+	76820167;76822438	76822368;76829587	ES	0.5	50	50	ENSMUST00000041262.14	ENSMUSG00000090258.8	Churc1	chr12	protein_coding	churchill domain containing 1
chr12	76822438	76909260	+	76822438	76829587	3pMXE	0.5	50	50	ENSMUST00000041262.14	ENSMUSG00000090258.8	Churc1	chr12	protein_coding	churchill domain containing 1
chr12	76812412;76820167	76820032;76829587	+	76812412;76822438	76822368;76829587	MXE	0.5	100	100	ENSMUST00000126408.2	ENSMUSG00000090258.8	Churc1	chr12	protein_coding	churchill domain containing 1
chr12	76820167	76909260	+	76820167	76829587	3pMXE	0.33	50	50	ENSMUST00000110399.3	ENSMUSG00000090258.8	Churc1	chr12	protein_coding	churchill domain containing 1
chr12	76812412	76822368	+	76820167	76822368	5pMXE	0.5	50	50	ENSMUST00000152917.2	ENSMUSG00000090258.8	Churc1	chr12	protein_coding	churchill domain containing 1
chr12	76820167	76829587	+	76820167	76822368	3pMXE	0.33	50	50	ENSMUST00000152917.2	ENSMUSG00000090258.8	Churc1	chr12	protein_coding	churchill domain containing 1
chr12	76820167	76909260	+	76820167	76822368	3pMXE	0.33	50	50	ENSMUST00000152917.2	ENSMUSG00000090258.8	Churc1	chr12	protein_coding	churchill domain containing 1
chr12	76812412;76822438	76822368;76909260	+	76812412;76820167	76820032;76909260	MXE	0.5	100	100	ENSMUST00000125842.8	ENSMUSG00000033373.17	Fntb	chr12	protein_coding	farnesyltransferase, CAAX box, beta
chr12	76820167;76822438	76822368;76909260	+	76820167	76909260	cassetteExon	0.5	100	100	ENSMUST00000125842.8	ENSMUSG00000033373.17	Fntb	chr12	protein_coding	farnesyltransferase, CAAX box, beta
chr12	76884425	76909260	+	76820167	76909260	A5SS	0.25	50	50	ENSMUST00000125842.8	ENSMUSG00000033373.17	Fntb	chr12	protein_coding	farnesyltransferase, CAAX box, beta
chr12	76887194	76909260	+	76820167	76909260	A5SS	0.25	50	50	ENSMUST00000125842.8	ENSMUSG00000033373.17	Fntb	chr12	protein_coding	farnesyltransferase, CAAX box, beta
chr12	76934176	76934506	+	76921897	76934506	A5SS	0.5	50	50	ENSMUST00000125842.8	ENSMUSG00000033373.17	Fntb	chr12	protein_coding	farnesyltransferase, CAAX box, beta
chr12	76956535	76956985	+	76953848	76956985	A5SS	0.5	50	50	ENSMUST00000125842.8	ENSMUSG00000033373.17	Fntb	chr12	protein_coding	farnesyltransferase, CAAX box, beta
chr12	76884425	76909260	+	76822438	76909260	A5SS	0.25	50	50	ENSMUST00000137826.8	ENSMUSG00000033373.17	Fntb	chr12	protein_coding	farnesyltransferase, CAAX box, beta
chr12	76887194	76909260	+	76822438	76909260	A5SS	0.25	50	50	ENSMUST00000137826.8	ENSMUSG00000033373.17	Fntb	chr12	protein_coding	farnesyltransferase, CAAX box, beta
chr12	76884425	76891313	+	76884425	76909260	A3SS	0.5	50	50	ENSMUST00000041008.10	ENSMUSG00000033373.17	Fntb	chr12	protein_coding	farnesyltransferase, CAAX box, beta
chr12	76887194	76909260	+	76884425	76909260	A5SS	0.25	50	50	ENSMUST00000041008.10	ENSMUSG00000033373.17	Fntb	chr12	protein_coding	farnesyltransferase, CAAX box, beta
chr12	76851277	76869626	-	76851277	76868968	5pMXE	0.16	50	50	ENSMUST00000021459.14	ENSMUSG00000021062.16	Rab15	chr12	protein_coding	RAB15, member RAS oncogene family
chr12	76851277	76852033	-	76851277	76868968	A5SS	0.16	50	50	ENSMUST00000021459.14	ENSMUSG00000021062.16	Rab15	chr12	protein_coding	RAB15, member RAS oncogene family
chr12	76851277	76860528	-	76851277	76868968	A5SS	0.16	50	50	ENSMUST00000021459.14	ENSMUSG00000021062.16	Rab15	chr12	protein_coding	RAB15, member RAS oncogene family
chr12	76851277	76865007	-	76851277	76868968	A5SS	0.16	50	50	ENSMUST00000021459.14	ENSMUSG00000021062.16	Rab15	chr12	protein_coding	RAB15, member RAS oncogene family
chr12	76851277	76865750	-	76851277	76868968	A5SS	0.16	50	50	ENSMUST00000021459.14	ENSMUSG00000021062.16	Rab15	chr12	protein_coding	RAB15, member RAS oncogene family
chr12	76851277	76860528	-	76851277	76852033	5pMXE	0.16	50	50	ENSMUST00000122419.8	ENSMUSG00000021062.16	Rab15	chr12	protein_coding	RAB15, member RAS oncogene family
chr12	76851277	76865007	-	76851277	76852033	5pMXE	0.16	50	50	ENSMUST00000122419.8	ENSMUSG00000021062.16	Rab15	chr12	protein_coding	RAB15, member RAS oncogene family
chr12	76851277	76865750	-	76851277	76852033	5pMXE	0.16	50	50	ENSMUST00000122419.8	ENSMUSG00000021062.16	Rab15	chr12	protein_coding	RAB15, member RAS oncogene family
chr12	76851277	76869626	-	76851277	76852033	5pMXE	0.16	50	50	ENSMUST00000122419.8	ENSMUSG00000021062.16	Rab15	chr12	protein_coding	RAB15, member RAS oncogene family
chr12	76851277	76865007	-	76851277	76860528	5pMXE	0.16	50	50	ENSMUST00000121716.8	ENSMUSG00000021062.16	Rab15	chr12	protein_coding	RAB15, member RAS oncogene family
chr12	76851277	76865750	-	76851277	76860528	5pMXE	0.16	50	50	ENSMUST00000121716.8	ENSMUSG00000021062.16	Rab15	chr12	protein_coding	RAB15, member RAS oncogene family
chr12	76851277	76869626	-	76851277	76860528	5pMXE	0.16	50	50	ENSMUST00000121716.8	ENSMUSG00000021062.16	Rab15	chr12	protein_coding	RAB15, member RAS oncogene family
chr12	76851277	76865750	-	76851277	76865007	5pMXE	0.16	50	50	ENSMUST00000118604.8	ENSMUSG00000021062.16	Rab15	chr12	protein_coding	RAB15, member RAS oncogene family
chr12	76851277	76869626	-	76851277	76865007	5pMXE	0.16	50	50	ENSMUST00000118604.8	ENSMUSG00000021062.16	Rab15	chr12	protein_coding	RAB15, member RAS oncogene family
chr12	76851277	76865750	-	76851277	76869626	A5SS	0.16	50	50	ENSMUST00000154765.8	ENSMUSG00000021062.16	Rab15	chr12	protein_coding	RAB15, member RAS oncogene family
chr12	76986864	77008037	-	76986864;77000050	76999943;77008037	ES	0.5	50	50	ENSMUST00000110395.11	ENSMUSG00000059436.14	Max	chr12	protein_coding	Max protein
chr12	77000050	77008764	-	77000050;77008063	77008037;77008764	ES	0.5	50	50	ENSMUST00000110395.11	ENSMUSG00000059436.14	Max	chr12	protein_coding	Max protein
chr12	76985529;76986288	76986204;76986741	-	76985529	76986741	cassetteExon	0.5	100	100	ENSMUST00000110395.11	ENSMUSG00000059436.14	Max	chr12	protein_coding	Max protein
chr12	77000050	77000424	-	77000050	77008037	A5SS	0.25	50	50	ENSMUST00000110395.11	ENSMUSG00000059436.14	Max	chr12	protein_coding	Max protein
chr12	77000050	77008559	-	77000050	77008037	A5SS&ES	0.25	50	50	ENSMUST00000110395.11	ENSMUSG00000059436.14	Max	chr12	protein_coding	Max protein
chr12	76986864;77008063	77008037;77008764	-	76986864;77000050	76999943;77008764	MXE	0.5	100	100	ENSMUST00000082136.7	ENSMUSG00000059436.14	Max	chr12	protein_coding	Max protein
chr12	77000050	77000424	-	77000050	77008764	A5SS	0.25	50	50	ENSMUST00000082136.7	ENSMUSG00000059436.14	Max	chr12	protein_coding	Max protein
chr12	77000050	77008559	-	77000050	77008764	A5SS	0.25	50	50	ENSMUST00000082136.7	ENSMUSG00000059436.14	Max	chr12	protein_coding	Max protein
chr12	76986864	77008037	-	76986864	76999943	A5SS&ES	0.5	50	50	ENSMUST00000218597.2	ENSMUSG00000059436.14	Max	chr12	protein_coding	Max protein
chr12	77000050	77000424	-	77000050	77008559	A5SS	0.25	50	50	ENSMUST00000218597.2	ENSMUSG00000059436.14	Max	chr12	protein_coding	Max protein
chr12	77324229	77370619	+	77324229;77325806	77325718;77370619	ES	0.5	50	50	ENSMUST00000177595.9	ENSMUSG00000021065.17	Fut8	chr12	protein_coding	fucosyltransferase 8
chr12	77286027	77324135	+	77284973	77324135	A5SS	0.5	50	50	ENSMUST00000177595.9	ENSMUSG00000021065.17	Fut8	chr12	protein_coding	fucosyltransferase 8
chr12	77435797	77440497	+	77412133	77440497	A5SS	0.5	50	50	ENSMUST00000177595.9	ENSMUSG00000021065.17	Fut8	chr12	protein_coding	fucosyltransferase 8
chr12	77457209	77459486	+	77440611	77459486	A5SS	0.5	50	50	ENSMUST00000177595.9	ENSMUSG00000021065.17	Fut8	chr12	protein_coding	fucosyltransferase 8
chr12	78245519	78247741	+	78245519;78246537	78246487;78247741	ES	0.5	50	50	ENSMUST00000211288.3	ENSMUSG00000099418.4	Gm6657	chr12	protein_coding	predicted gene 6657
chr12	78248079	78248542	+	78248079	78248561	A3SS	0.5	50	50	ENSMUST00000211288.3	ENSMUSG00000099418.4	Gm6657	chr12	protein_coding	predicted gene 6657
chr12	78249154	78255673	+	78249154	78255256	A3SS&ES	0.5	50	50	ENSMUST00000211288.3	ENSMUSG00000099418.4	Gm6657	chr12	protein_coding	predicted gene 6657
chr12	78245519;78248079	78247741;78248561	+	78245519	78248561	cassetteExon	0.5	100	100	ENSMUST00000188791.2	ENSMUSG00000099418.4	Gm6657	chr12	protein_coding	predicted gene 6657
chr12	78245519	78246487	+	78245519	78248561	A3SS	0.33	50	50	ENSMUST00000188791.2	ENSMUSG00000099418.4	Gm6657	chr12	protein_coding	predicted gene 6657
chr12	78248620	78255597	+	78248620	78249013	A3SS&ES	0.5	50	50	ENSMUST00000188791.2	ENSMUSG00000099418.4	Gm6657	chr12	protein_coding	predicted gene 6657
chr12	78245519	78248561	+	78245519	78247741	3pMXE	0.33	50	50	ENSMUST00000187283.2	ENSMUSG00000099418.4	Gm6657	chr12	protein_coding	predicted gene 6657
chr12	78255314	78255597	+	78248620	78255597	A5SS	0.5	50	50	ENSMUST00000185497.2	ENSMUSG00000099418.4	Gm6657	chr12	protein_coding	predicted gene 6657
chr12	78539084;78540831	78540724;78551391	+	78539084	78551391	cassetteExon	0.5	100	100	ENSMUST00000052472.6	ENSMUSG00000047454.13	Gphn	chr12	protein_coding	gephyrin
chr12	78551525	78569672	+	78551525	78609630	A3SS	0.5	50	50	ENSMUST00000110388.10	ENSMUSG00000047454.13	Gphn	chr12	protein_coding	gephyrin
chr12	78579472	78609630	+	78551525	78609630	A5SS	0.5	50	50	ENSMUST00000110388.10	ENSMUSG00000047454.13	Gphn	chr12	protein_coding	gephyrin
chr12	78766407	78780945	+	78766407;78775038	78775010;78780945	ES	0.33	50	50	ENSMUST00000077968.5	ENSMUSG00000056987.9	Fam71d	chr12	protein_coding	family with sequence similarity 71, member D
chr12	78738566;78742817	78742613;78745927	+	78738566	78745927	cassetteExon	0.5	100	100	ENSMUST00000077968.5	ENSMUSG00000056987.9	Fam71d	chr12	protein_coding	family with sequence similarity 71, member D
chr12	78766407;78770726	78770584;78780945	+	78766407;78775038	78775010;78780945	MXE	0.5	100	100	ENSMUST00000077968.5	ENSMUSG00000056987.9	Fam71d	chr12	protein_coding	family with sequence similarity 71, member D
chr12	78757200	78758925	+	78757200	78758838	A3SS	0.5	50	50	ENSMUST00000077968.5	ENSMUSG00000056987.9	Fam71d	chr12	protein_coding	family with sequence similarity 71, member D
chr12	78766407	78768904	+	78766407	78775010	A3SS	0.25	50	50	ENSMUST00000077968.5	ENSMUSG00000056987.9	Fam71d	chr12	protein_coding	family with sequence similarity 71, member D
chr12	78775038	78777911	+	78775038	78780945	A3SS	0.5	50	50	ENSMUST00000077968.5	ENSMUSG00000056987.9	Fam71d	chr12	protein_coding	family with sequence similarity 71, member D
chr12	78745987	78757044	+	78745992	78757044	A5SS	0.5	50	50	ENSMUST00000077968.5	ENSMUSG00000056987.9	Fam71d	chr12	protein_coding	family with sequence similarity 71, member D
chr12	78766407;78770726	78770584;78780945	+	78766407	78780945	cassetteExon	0.5	100	100	ENSMUST00000219551.2	ENSMUSG00000056987.9	Fam71d	chr12	protein_coding	family with sequence similarity 71, member D
chr12	78766407	78768904	+	78766407	78780945	A3SS	0.25	50	50	ENSMUST00000219551.2	ENSMUSG00000056987.9	Fam71d	chr12	protein_coding	family with sequence similarity 71, member D
chr12	78766407	78770584	+	78766407	78768904	3pMXE	0.25	50	50	ENSMUST00000219572.2	ENSMUSG00000056987.9	Fam71d	chr12	protein_coding	family with sequence similarity 71, member D
chr12	78766407	78770584	+	78766407;78769046	78768904;78770584	ES	0.5	50	50	ENSMUST00000220101.2	ENSMUSG00000056987.9	Fam71d	chr12	protein_coding	family with sequence similarity 71, member D
chr12	78766407;78775038	78775010;78780945	+	78766407;78770726	78768904;78780945	MXE	0.5	100	100	ENSMUST00000220101.2	ENSMUSG00000056987.9	Fam71d	chr12	protein_coding	family with sequence similarity 71, member D
chr12	78766407	78770584	+	78766407	78775010	A3SS	0.33	50	50	ENSMUST00000219507.2	ENSMUSG00000056987.9	Fam71d	chr12	protein_coding	family with sequence similarity 71, member D
chr12	78841107	78843877	+	78841107	78843640	A3SS	0.5	50	50	ENSMUST00000219197.2	ENSMUSG00000021112.10	Mpp5	chr12	protein_coding	membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
chr12	78864545	78865978	+	78864545	78865961	A3SS	0.5	50	50	ENSMUST00000219197.2	ENSMUSG00000021112.10	Mpp5	chr12	protein_coding	membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
chr12	78795880	78841019	+	78795719	78841019	A5SS	0.5	50	50	ENSMUST00000219197.2	ENSMUSG00000021112.10	Mpp5	chr12	protein_coding	membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
chr12	78905751	78908193	-	78904118	78908193	A3SS	0.5	50	50	ENSMUST00000021536.9	ENSMUSG00000021114.10	Atp6v1d	chr12	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit D
chr12	78908954	78921338	+	78908954;78913541	78913300;78921338	ES	0.5	50	50	ENSMUST00000071230.8	ENSMUSG00000021116.11	Eif2s1	chr12	protein_coding	eukaryotic translation initiation factor 2, subunit 1 alpha
chr12	79024715	79053151	-	79024715	79030160	5pMXE	0.2	50	50	ENSMUST00000070174.14	ENSMUSG00000046157.14	Tmem229b	chr12	protein_coding	transmembrane protein 229B
chr12	79024715	79053747	-	79024715	79030160	5pMXE	0.2	50	50	ENSMUST00000070174.14	ENSMUSG00000046157.14	Tmem229b	chr12	protein_coding	transmembrane protein 229B
chr12	79024715	79054087	-	79024715	79030160	5pMXE	0.2	50	50	ENSMUST00000070174.14	ENSMUSG00000046157.14	Tmem229b	chr12	protein_coding	transmembrane protein 229B
chr12	79011947	79024535	-	79011950	79024535	A3SS	0.33	50	50	ENSMUST00000070174.14	ENSMUSG00000046157.14	Tmem229b	chr12	protein_coding	transmembrane protein 229B
chr12	79020122	79024535	-	79011950	79024535	A3SS	0.33	50	50	ENSMUST00000070174.14	ENSMUSG00000046157.14	Tmem229b	chr12	protein_coding	transmembrane protein 229B
chr12	79024715	79027478	-	79024715	79030160	A5SS	0.2	50	50	ENSMUST00000070174.14	ENSMUSG00000046157.14	Tmem229b	chr12	protein_coding	transmembrane protein 229B
chr12	79011950;79024715	79024535;79054087	-	79011950	79054087	cassetteExon	0.5	100	100	ENSMUST00000174697.2	ENSMUSG00000046157.14	Tmem229b	chr12	protein_coding	transmembrane protein 229B
chr12	79024715	79053151	-	79024715	79027478	5pMXE	0.2	50	50	ENSMUST00000174072.8	ENSMUSG00000046157.14	Tmem229b	chr12	protein_coding	transmembrane protein 229B
chr12	79024715	79053747	-	79024715	79027478	5pMXE	0.2	50	50	ENSMUST00000174072.8	ENSMUSG00000046157.14	Tmem229b	chr12	protein_coding	transmembrane protein 229B
chr12	79024715	79054087	-	79024715	79027478	5pMXE	0.2	50	50	ENSMUST00000174072.8	ENSMUSG00000046157.14	Tmem229b	chr12	protein_coding	transmembrane protein 229B
chr12	79024715	79054087	-	79024715	79053747	5pMXE	0.2	50	50	ENSMUST00000056660.13	ENSMUSG00000046157.14	Tmem229b	chr12	protein_coding	transmembrane protein 229B
chr12	79020122	79024535	-	79011947	79024535	A3SS	0.33	50	50	ENSMUST00000056660.13	ENSMUSG00000046157.14	Tmem229b	chr12	protein_coding	transmembrane protein 229B
chr12	79024715	79053151	-	79024715	79053747	A5SS	0.2	50	50	ENSMUST00000056660.13	ENSMUSG00000046157.14	Tmem229b	chr12	protein_coding	transmembrane protein 229B
chr12	79024715	79053151	-	79024715	79054087	A5SS	0.2	50	50	ENSMUST00000174721.8	ENSMUSG00000046157.14	Tmem229b	chr12	protein_coding	transmembrane protein 229B
chr12	79076622	79087266	+	79076194	79087266	A5SS	0.33	50	50	ENSMUST00000039928.7	ENSMUSG00000060716.8	Plekhh1	chr12	protein_coding	pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
chr12	79082483	79087266	+	79076194	79087266	A5SS	0.33	50	50	ENSMUST00000039928.7	ENSMUSG00000060716.8	Plekhh1	chr12	protein_coding	pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
chr12	79114432	79114736	+	79114009	79114736	A5SS	0.5	50	50	ENSMUST00000039928.7	ENSMUSG00000060716.8	Plekhh1	chr12	protein_coding	pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
chr12	79082483	79087266	+	79076622	79087266	A5SS	0.33	50	50	ENSMUST00000217954.2	ENSMUSG00000060716.8	Plekhh1	chr12	protein_coding	pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
chr12	79132625	79136214	-	79132630	79136214	A3SS	0.5	50	50	ENSMUST00000072154.9	ENSMUSG00000021120.12	Pigh	chr12	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class H
chr12	79145269;79149754	79149629;79150555	-	79145269	79150555	cassetteExon	0.5	100	100	ENSMUST00000220031.2	ENSMUSG00000112489.2	9230116L04Rik	chr12	lncRNA	RIKEN cDNA 9230116L04 gene
chr12	79144916	79145111	-	79136759	79145111	A3SS	0.5	50	50	ENSMUST00000220031.2	ENSMUSG00000112489.2	9230116L04Rik	chr12	lncRNA	RIKEN cDNA 9230116L04 gene
chr12	79145169	79150555	-	79145269	79150555	A3SS	0.33	50	50	ENSMUST00000220031.2	ENSMUSG00000112489.2	9230116L04Rik	chr12	lncRNA	RIKEN cDNA 9230116L04 gene
chr12	79145169	79150555	-	79149754	79150555	A3SS&ES	0.33	50	50	ENSMUST00000217990.2	ENSMUSG00000112489.2	9230116L04Rik	chr12	lncRNA	RIKEN cDNA 9230116L04 gene
chr12	79203345	79207183	-	79203345;79204683	79204622;79207183	ES	0.5	50	50	ENSMUST00000055262.13	ENSMUSG00000021124.14	Vti1b	chr12	protein_coding	vesicle transport through interaction with t-SNAREs 1B
chr12	79211913	79218994	-	79211913;79213183	79213125;79218994	ES	0.5	50	50	ENSMUST00000055262.13	ENSMUSG00000021124.14	Vti1b	chr12	protein_coding	vesicle transport through interaction with t-SNAREs 1B
chr12	79207356;79208996	79208875;79211722	-	79207356	79211722	cassetteExon	0.5	100	100	ENSMUST00000055262.13	ENSMUSG00000021124.14	Vti1b	chr12	protein_coding	vesicle transport through interaction with t-SNAREs 1B
chr12	79211913	79218994	-	79211913	79213125	5pMXE	0.5	50	50	ENSMUST00000163031.2	ENSMUSG00000021124.14	Vti1b	chr12	protein_coding	vesicle transport through interaction with t-SNAREs 1B
chr12	79235410	79238500	-	79235410;79235881	79235763;79238500	ES	0.5	50	50	ENSMUST00000161204.8	ENSMUSG00000066441.15	Rdh11	chr12	protein_coding	retinol dehydrogenase 11
chr12	79235881	79237543	-	79235881	79238500	A5SS	0.5	50	50	ENSMUST00000161204.8	ENSMUSG00000066441.15	Rdh11	chr12	protein_coding	retinol dehydrogenase 11
chr12	79258317	79259463	+	79258317	79259427	A3SS	0.5	50	50	ENSMUST00000021548.12	ENSMUSG00000021123.13	Rdh12	chr12	protein_coding	retinol dehydrogenase 12
chr12	79280079	79329576	-	79327739	79329576	A3SS&ES	0.5	50	50	ENSMUST00000021547.8	ENSMUSG00000066440.6	Zfyve26	chr12	protein_coding	zinc finger, FYVE domain containing 26
chr12	79374178	79554483	+	79374178	79704598	A3SS	0.5	50	50	ENSMUST00000171210.3	ENSMUSG00000059060.16	Rad51b	chr12	protein_coding	RAD51 paralog B
chr12	79704694	79748405	+	79704694	79813845	A3SS	0.5	50	50	ENSMUST00000171210.3	ENSMUSG00000059060.16	Rad51b	chr12	protein_coding	RAD51 paralog B
chr12	79344157	79347316	+	79344106	79347316	A5SS	0.33	50	50	ENSMUST00000171210.3	ENSMUSG00000059060.16	Rad51b	chr12	protein_coding	RAD51 paralog B
chr12	79345028	79347316	+	79344106	79347316	A5SS	0.33	50	50	ENSMUST00000171210.3	ENSMUSG00000059060.16	Rad51b	chr12	protein_coding	RAD51 paralog B
chr12	79345028	79347316	+	79344157	79347316	A5SS	0.33	50	50	ENSMUST00000079533.12	ENSMUSG00000059060.16	Rad51b	chr12	protein_coding	RAD51 paralog B
chr12	79971012	79972166	-	79971012	79971435	5pMXE	0.5	50	50	ENSMUST00000218818.2	ENSMUSG00000112765.2	9430078K24Rik	chr12	lncRNA	RIKEN cDNA 9430078K24 gene
chr12	79964697;79965805	79965730;79970909	-	79964697	79970909	cassetteExon	0.5	100	100	ENSMUST00000218818.2	ENSMUSG00000112765.2	9430078K24Rik	chr12	lncRNA	RIKEN cDNA 9430078K24 gene
chr12	79964697	79970909	-	79964697	79965730	A5SS&ES	0.5	50	50	ENSMUST00000219857.2	ENSMUSG00000112765.2	9430078K24Rik	chr12	lncRNA	RIKEN cDNA 9430078K24 gene
chr12	79965805	79970909	-	79965805	79978011	A5SS	0.5	50	50	ENSMUST00000219857.2	ENSMUSG00000112765.2	9430078K24Rik	chr12	lncRNA	RIKEN cDNA 9430078K24 gene
chr12	80178733	80179264	-	80178733	80179501	A5SS	0.5	50	50	ENSMUST00000219349.2	ENSMUSG00000097729.3	2310015A10Rik	chr12	lncRNA	RIKEN cDNA 2310015A10 gene
chr12	80177885	80178588	-	80171900	80178588	A3SS	0.5	50	50	ENSMUST00000220125.2	ENSMUSG00000097729.3	2310015A10Rik	chr12	lncRNA	RIKEN cDNA 2310015A10 gene
chr12	80171900	80173840	-	80171900	80178588	A5SS	0.5	50	50	ENSMUST00000220125.2	ENSMUSG00000097729.3	2310015A10Rik	chr12	lncRNA	RIKEN cDNA 2310015A10 gene
chr12	80215790;80217022	80216957;80218503	-	80215790;80217540	80217460;80218503	MXE	0.5	100	100	ENSMUST00000021554.16	ENSMUSG00000015143.16	Actn1	chr12	protein_coding	actinin, alpha 1
chr12	80256247	80305441	-	80256247	80306761	A5SS	0.33	50	50	ENSMUST00000021554.16	ENSMUSG00000015143.16	Actn1	chr12	protein_coding	actinin, alpha 1
chr12	80256247	80306630	-	80256247	80306761	A5SS	0.33	50	50	ENSMUST00000021554.16	ENSMUSG00000015143.16	Actn1	chr12	protein_coding	actinin, alpha 1
chr12	80256247	80305441	-	80256247	80306630	A5SS	0.33	50	50	ENSMUST00000218874.2	ENSMUSG00000015143.16	Actn1	chr12	protein_coding	actinin, alpha 1
chr12	80413601	80423292	-	80410844	80423292	A3SS	0.5	50	50	ENSMUST00000054145.8	ENSMUSG00000049106.8	Dcaf5	chr12	protein_coding	DDB1 and CUL4 associated factor 5
chr12	80451472	80483138	-	80451472	80482959	A5SS	0.5	50	50	ENSMUST00000054145.8	ENSMUSG00000049106.8	Dcaf5	chr12	protein_coding	DDB1 and CUL4 associated factor 5
chr12	80510054	80527229	+	80510054;80522962	80522497;80527229	ES	0.33	50	50	ENSMUST00000038185.10	ENSMUSG00000032705.10	Exd2	chr12	protein_coding	exonuclease 3'-5' domain containing 2
chr12	80522962;80526166	80526040;80527229	+	80522962	80527229	cassetteExon	0.5	100	100	ENSMUST00000038185.10	ENSMUSG00000032705.10	Exd2	chr12	protein_coding	exonuclease 3'-5' domain containing 2
chr12	80531146;80535281	80535059;80536176	+	80531146	80536176	cassetteExon	0.5	100	100	ENSMUST00000038185.10	ENSMUSG00000032705.10	Exd2	chr12	protein_coding	exonuclease 3'-5' domain containing 2
chr12	80537661	80537871	+	80537661	80537869	A3SS	0.5	50	50	ENSMUST00000038185.10	ENSMUSG00000032705.10	Exd2	chr12	protein_coding	exonuclease 3'-5' domain containing 2
chr12	80526166	80527229	+	80510054	80527229	A5SS	0.33	50	50	ENSMUST00000219272.2	ENSMUSG00000032705.10	Exd2	chr12	protein_coding	exonuclease 3'-5' domain containing 2
chr12	80565736	80565830	+	80565422	80565830	A5SS	0.5	50	50	ENSMUST00000219993.2	ENSMUSG00000021130.9	Galnt16	chr12	protein_coding	polypeptide N-acetylgalactosaminyltransferase 16
chr12	80687818;80689619	80689563;80690538	-	80687818	80690538	cassetteExon	0.5	100	100	ENSMUST00000021559.14	ENSMUSG00000021131.15	Erh	chr12	protein_coding	ERH mRNA splicing and mitosis factor
chr12	80682654	80684264	-	80681301	80684264	A3SS	0.5	50	50	ENSMUST00000021559.14	ENSMUSG00000021131.15	Erh	chr12	protein_coding	ERH mRNA splicing and mitosis factor
chr12	80720068;80724040	80723906;80726249	+	80720068;80722708	80722623;80726249	MXE	0.5	100	100	ENSMUST00000219706.2	ENSMUSG00000048833.10	Slc39a9	chr12	protein_coding	solute carrier family 39 (zinc transporter), member 9
chr12	80722708;80724040	80723906;80726249	+	80722708	80726249	cassetteExon	0.5	100	100	ENSMUST00000219706.2	ENSMUSG00000048833.10	Slc39a9	chr12	protein_coding	solute carrier family 39 (zinc transporter), member 9
chr12	80691750	80693733	+	80691750	80709244	A3SS	0.5	50	50	ENSMUST00000219706.2	ENSMUSG00000048833.10	Slc39a9	chr12	protein_coding	solute carrier family 39 (zinc transporter), member 9
chr12	80691190	80709244	+	80691750	80709244	A5SS	0.5	50	50	ENSMUST00000219706.2	ENSMUSG00000048833.10	Slc39a9	chr12	protein_coding	solute carrier family 39 (zinc transporter), member 9
chr12	80691190;80691750	80691380;80709244	+	80691190	80709244	cassetteExon	0.5	100	100	ENSMUST00000219405.2	ENSMUSG00000048833.10	Slc39a9	chr12	protein_coding	solute carrier family 39 (zinc transporter), member 9
chr12	80720068	80723906	+	80720068;80722708	80722623;80723906	ES	0.5	50	50	ENSMUST00000085245.7	ENSMUSG00000048833.10	Slc39a9	chr12	protein_coding	solute carrier family 39 (zinc transporter), member 9
chr12	80722708	80726249	+	80722708	80723906	3pMXE	0.5	50	50	ENSMUST00000217889.2	ENSMUSG00000048833.10	Slc39a9	chr12	protein_coding	solute carrier family 39 (zinc transporter), member 9
chr12	80753704	80754956	+	80754037	80754956	A5SS&ES	0.5	50	50	ENSMUST00000140770.2	ENSMUSG00000066438.7	Plekhd1	chr12	protein_coding	pleckstrin homology domain containing, family D (with coiled-coil domains) member 1
chr12	80767641	80767987	+	80767536	80767987	A5SS	0.5	50	50	ENSMUST00000140770.2	ENSMUSG00000066438.7	Plekhd1	chr12	protein_coding	pleckstrin homology domain containing, family D (with coiled-coil domains) member 1
chr12	80875017	80915201	+	80875017;80898050	80897988;80915201	ES	0.5	50	50	ENSMUST00000220238.2	ENSMUSG00000021133.10	Susd6	chr12	protein_coding	sushi domain containing 6
chr12	80993494	80993890	+	80993494	80994085	A3SS	0.5	50	50	ENSMUST00000094693.11	ENSMUSG00000021134.18	Srsf5	chr12	protein_coding	serine and arginine-rich splicing factor 5
chr12	80994639	80994903	+	80994639	80995869	A3SS	0.5	50	50	ENSMUST00000094693.11	ENSMUSG00000021134.18	Srsf5	chr12	protein_coding	serine and arginine-rich splicing factor 5
chr12	80996378	80996491	+	80996378	80996494	A3SS	0.5	50	50	ENSMUST00000094693.11	ENSMUSG00000021134.18	Srsf5	chr12	protein_coding	serine and arginine-rich splicing factor 5
chr12	80992442	80993350	+	80992446	80993350	A5SS	0.33	50	50	ENSMUST00000094693.11	ENSMUSG00000021134.18	Srsf5	chr12	protein_coding	serine and arginine-rich splicing factor 5
chr12	80992572	80993350	+	80992446	80993350	A5SS	0.33	50	50	ENSMUST00000094693.11	ENSMUSG00000021134.18	Srsf5	chr12	protein_coding	serine and arginine-rich splicing factor 5
chr12	80992572	80993350	+	80992442	80993350	A5SS	0.33	50	50	ENSMUST00000110352.10	ENSMUSG00000021134.18	Srsf5	chr12	protein_coding	serine and arginine-rich splicing factor 5
chr12	81226497	81231323	+	81226497;81230815	81230762;81231323	ES	0.5	50	50	ENSMUST00000110347.9	ENSMUSG00000021136.14	Smoc1	chr12	protein_coding	SPARC related  modular calcium binding 1
chr12	81184786	81197426	+	81184786	81197393	A3SS	0.5	50	50	ENSMUST00000110347.9	ENSMUSG00000021136.14	Smoc1	chr12	protein_coding	SPARC related  modular calcium binding 1
chr12	81251790;81256245	81256228;81260840	-	81251790	81260840	cassetteExon	0.5	100	100	ENSMUST00000085238.13	ENSMUSG00000079055.11	Slc8a3	chr12	protein_coding	solute carrier family 8 (sodium/calcium exchanger), member 3
chr12	81263601	81361034	-	81260943	81361034	A3SS	0.5	50	50	ENSMUST00000085238.13	ENSMUSG00000079055.11	Slc8a3	chr12	protein_coding	solute carrier family 8 (sodium/calcium exchanger), member 3
chr12	81260943	81341227	-	81260943	81361034	A5SS	0.5	50	50	ENSMUST00000085238.13	ENSMUSG00000079055.11	Slc8a3	chr12	protein_coding	solute carrier family 8 (sodium/calcium exchanger), member 3
chr12	81256245;81263601	81263495;81361034	-	81256245;81260943	81260840;81361034	MXE	0.5	100	100	ENSMUST00000064594.14	ENSMUSG00000079055.11	Slc8a3	chr12	protein_coding	solute carrier family 8 (sodium/calcium exchanger), member 3
chr12	81251790;81260943	81260840;81361034	-	81251790;81263601	81256228;81361034	MXE	0.5	100	100	ENSMUST00000182208.8	ENSMUSG00000079055.11	Slc8a3	chr12	protein_coding	solute carrier family 8 (sodium/calcium exchanger), member 3
chr12	81551413	81579490	-	81551413;81557739	81557603;81579490	ES	0.5	50	50	ENSMUST00000164386.8	ENSMUSG00000021139.18	Gm20498	chr12	protein_coding	predicted gene 20498
chr12	81406118;81421281	81421192;81521361	-	81406118	81521361	cassetteExon	0.5	100	100	ENSMUST00000164386.8	ENSMUSG00000021139.18	Gm20498	chr12	protein_coding	predicted gene 20498
chr12	81527776;81536018	81535949;81551318	-	81527776	81551318	cassetteExon	0.5	100	100	ENSMUST00000164386.8	ENSMUSG00000021139.18	Gm20498	chr12	protein_coding	predicted gene 20498
chr12	81518945	81521361	-	81406118	81521361	A3SS	0.25	50	50	ENSMUST00000164386.8	ENSMUSG00000021139.18	Gm20498	chr12	protein_coding	predicted gene 20498
chr12	81519125	81521361	-	81406118	81521361	A3SS	0.25	50	50	ENSMUST00000164386.8	ENSMUSG00000021139.18	Gm20498	chr12	protein_coding	predicted gene 20498
chr12	81548940	81551318	-	81527776	81551318	A3SS	0.33	50	50	ENSMUST00000164386.8	ENSMUSG00000021139.18	Gm20498	chr12	protein_coding	predicted gene 20498
chr12	81527776	81531540	-	81527776	81551318	A5SS	0.2	50	50	ENSMUST00000164386.8	ENSMUSG00000021139.18	Gm20498	chr12	protein_coding	predicted gene 20498
chr12	81527776	81531671	-	81527776	81551318	A5SS	0.2	50	50	ENSMUST00000164386.8	ENSMUSG00000021139.18	Gm20498	chr12	protein_coding	predicted gene 20498
chr12	81527776	81531709	-	81527776	81551318	A5SS	0.2	50	50	ENSMUST00000164386.8	ENSMUSG00000021139.18	Gm20498	chr12	protein_coding	predicted gene 20498
chr12	81551413	81579139	-	81551413	81557603	A5SS&ES	0.33	50	50	ENSMUST00000164386.8	ENSMUSG00000021139.18	Gm20498	chr12	protein_coding	predicted gene 20498
chr12	81557739	81579139	-	81557739	81579490	A5SS	0.5	50	50	ENSMUST00000164386.8	ENSMUSG00000021139.18	Gm20498	chr12	protein_coding	predicted gene 20498
chr12	81421281	81521361	-	81519125	81521361	3pMXE	0.25	50	50	ENSMUST00000166664.2	ENSMUSG00000021139.18	Gm20498	chr12	protein_coding	predicted gene 20498
chr12	81518945	81521361	-	81519125	81521361	A3SS	0.25	50	50	ENSMUST00000166664.2	ENSMUSG00000021139.18	Gm20498	chr12	protein_coding	predicted gene 20498
chr12	81551413	81579139	-	81551413	81579490	A5SS	0.33	50	50	ENSMUST00000171459.8	ENSMUSG00000021139.18	Gm20498	chr12	protein_coding	predicted gene 20498
chr12	81551413	81579139	-	81551413;81557739	81557603;81579139	ES	0.5	50	50	ENSMUST00000170958.8	ENSMUSG00000021139.18	Gm20498	chr12	protein_coding	predicted gene 20498
chr12	81551413	81579490	-	81551413	81557603	A5SS&ES	0.33	50	50	ENSMUST00000170958.8	ENSMUSG00000021139.18	Gm20498	chr12	protein_coding	predicted gene 20498
chr12	81548940	81551318	-	81536018	81551318	A3SS	0.33	50	50	ENSMUST00000110339.5	ENSMUSG00000021139.18	Gm20498	chr12	protein_coding	predicted gene 20498
chr12	81527776	81531540	-	81527776	81535949	A5SS	0.2	50	50	ENSMUST00000110339.5	ENSMUSG00000021139.18	Gm20498	chr12	protein_coding	predicted gene 20498
chr12	81527776	81531671	-	81527776	81535949	A5SS	0.2	50	50	ENSMUST00000110339.5	ENSMUSG00000021139.18	Gm20498	chr12	protein_coding	predicted gene 20498
chr12	81527776	81531709	-	81527776	81535949	A5SS	0.2	50	50	ENSMUST00000110339.5	ENSMUSG00000021139.18	Gm20498	chr12	protein_coding	predicted gene 20498
chr12	81527776	81531540	-	81527776	81531671	A5SS	0.2	50	50	ENSMUST00000110340.9	ENSMUSG00000091803.8	Cox16	chr12	protein_coding	cytochrome c oxidase assembly protein 16
chr12	81527776	81531709	-	81527776	81531671	A5SS	0.2	50	50	ENSMUST00000110340.9	ENSMUSG00000091803.8	Cox16	chr12	protein_coding	cytochrome c oxidase assembly protein 16
chr12	81518945	81521361	-	81421281	81521361	A3SS	0.25	50	50	ENSMUST00000166723.8	ENSMUSG00000091803.8	Cox16	chr12	protein_coding	cytochrome c oxidase assembly protein 16
chr12	81527776	81531709	-	81527776	81531540	5pMXE	0.2	50	50	ENSMUST00000171237.8	ENSMUSG00000091803.8	Cox16	chr12	protein_coding	cytochrome c oxidase assembly protein 16
chr12	81621326	81628575	-	81621326;81626459	81626344;81628575	ES	0.5	50	50	ENSMUST00000161211.8	ENSMUSG00000002679.15	Med6	chr12	protein_coding	mediator complex subunit 6
chr12	81638187	81640655	-	81638187	81641714	A5SS	0.5	50	50	ENSMUST00000161211.8	ENSMUSG00000002679.15	Med6	chr12	protein_coding	mediator complex subunit 6
chr12	81621326	81628575	-	81626459	81628575	3pMXE	0.5	50	50	ENSMUST00000161902.2	ENSMUSG00000002679.15	Med6	chr12	protein_coding	mediator complex subunit 6
chr12	81772608;81774173	81774105;81776457	-	81772608	81776457	cassetteExon	0.5	100	100	ENSMUST00000035987.9	ENSMUSG00000042724.9	Map3k9	chr12	protein_coding	mitogen-activated protein kinase kinase kinase 9
chr12	81975148	81993705	+	81975148;81980489	81980305;81993705	ES	0.33	50	50	ENSMUST00000221721.2	ENSMUSG00000021140.10	Pcnx	chr12	protein_coding	pecanex homolog
chr12	82042104;82042371	82042305;82042495	+	82042104	82042495	cassetteExon	0.5	100	100	ENSMUST00000221721.2	ENSMUSG00000021140.10	Pcnx	chr12	protein_coding	pecanex homolog
chr12	81966154	81975016	+	81966154	81975019	A3SS	0.33	50	50	ENSMUST00000221721.2	ENSMUSG00000021140.10	Pcnx	chr12	protein_coding	pecanex homolog
chr12	81995189	81996875	+	81995189	81996890	A3SS	0.5	50	50	ENSMUST00000221721.2	ENSMUSG00000021140.10	Pcnx	chr12	protein_coding	pecanex homolog
chr12	81966154	81993705	+	81966154;81975148	81975016;81993705	ES	0.33	50	50	ENSMUST00000222005.2	ENSMUSG00000021140.10	Pcnx	chr12	protein_coding	pecanex homolog
chr12	81966154;81975148	81975019;81993705	+	81966154	81993705	cassetteExon	0.5	100	100	ENSMUST00000221675.2	ENSMUSG00000021140.10	Pcnx	chr12	protein_coding	pecanex homolog
chr12	81980489	81993705	+	81966154	81993705	A5SS	0.33	50	50	ENSMUST00000221675.2	ENSMUSG00000021140.10	Pcnx	chr12	protein_coding	pecanex homolog
chr12	82281302	82312731	+	82281302	82287397	3pMXE	0.33	50	50	ENSMUST00000220550.2	ENSMUSG00000042700.17	Sipa1l1	chr12	protein_coding	signal-induced proliferation-associated 1 like 1
chr12	82281302	82358123	+	82281302	82287397	3pMXE	0.33	50	50	ENSMUST00000220550.2	ENSMUSG00000042700.17	Sipa1l1	chr12	protein_coding	signal-induced proliferation-associated 1 like 1
chr12	82281302;82312799	82312731;82358123	+	82281302	82358123	cassetteExon	0.5	100	100	ENSMUST00000166429.9	ENSMUSG00000042700.17	Sipa1l1	chr12	protein_coding	signal-induced proliferation-associated 1 like 1
chr12	82469267;82469869	82469435;82471787	+	82469267	82471787	cassetteExon	0.5	100	100	ENSMUST00000166429.9	ENSMUSG00000042700.17	Sipa1l1	chr12	protein_coding	signal-induced proliferation-associated 1 like 1
chr12	82303383	82358123	+	82281302	82358123	A5SS	0.33	50	50	ENSMUST00000166429.9	ENSMUSG00000042700.17	Sipa1l1	chr12	protein_coding	signal-induced proliferation-associated 1 like 1
chr12	82496178	82496675	+	82496165	82496675	A5SS	0.5	50	50	ENSMUST00000166429.9	ENSMUSG00000042700.17	Sipa1l1	chr12	protein_coding	signal-induced proliferation-associated 1 like 1
chr12	82303383	82358123	+	82312799	82358123	A5SS&ES	0.33	50	50	ENSMUST00000222298.2	ENSMUSG00000042700.17	Sipa1l1	chr12	protein_coding	signal-induced proliferation-associated 1 like 1
chr12	82663546	83032069	+	82698686	83032069	A5SS&ES	0.5	50	50	ENSMUST00000201602.4	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	82664157	82698583	+	82635253	82698583	A5SS	0.14	50	50	ENSMUST00000201602.4	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	82664336	82698583	+	82635253	82698583	A5SS	0.14	50	50	ENSMUST00000201602.4	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	82664385	82698583	+	82635253	82698583	A5SS	0.14	50	50	ENSMUST00000201602.4	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	82664505	82698583	+	82635253	82698583	A5SS	0.14	50	50	ENSMUST00000201602.4	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	82664586	82698583	+	82635253	82698583	A5SS	0.14	50	50	ENSMUST00000201602.4	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	82664872	82698583	+	82635253	82698583	A5SS	0.14	50	50	ENSMUST00000201602.4	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	83117433	83153532	+	83117433;83138632	83138522;83153532	ES	0.5	50	50	ENSMUST00000186848.5	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	83180518;83184213	83184160;83204695	+	83180518	83204695	cassetteExon	0.5	100	100	ENSMUST00000186848.5	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	83180518;83184213	83184164;83204695	+	83180518	83204695	cassetteExon	0.5	100	100	ENSMUST00000186848.5	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	83138632	83138810	+	83138632	83153532	A3SS	0.5	50	50	ENSMUST00000186848.5	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	83197025	83204695	+	83180518	83204695	A5SS	0.33	50	50	ENSMUST00000186848.5	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	82664336	82698583	+	82664157	82698583	A5SS	0.14	50	50	ENSMUST00000161801.8	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	82664385	82698583	+	82664157	82698583	A5SS	0.14	50	50	ENSMUST00000161801.8	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	82664505	82698583	+	82664157	82698583	A5SS	0.14	50	50	ENSMUST00000161801.8	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	82664586	82698583	+	82664157	82698583	A5SS	0.14	50	50	ENSMUST00000161801.8	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	82664872	82698583	+	82664157	82698583	A5SS	0.14	50	50	ENSMUST00000161801.8	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	83184213;83197025	83196959;83204695	+	83184213	83204695	cassetteExon	0.5	100	100	ENSMUST00000185665.7	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	83180518	83184164	+	83180518	83184160	A3SS	0.33	50	50	ENSMUST00000185665.7	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	83184213	83184365	+	83184213	83204695	A3SS	0.2	50	50	ENSMUST00000185665.7	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	83184213	83184374	+	83184213	83204695	A3SS	0.2	50	50	ENSMUST00000185665.7	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	83184213	83184386	+	83184213	83204695	A3SS	0.2	50	50	ENSMUST00000185665.7	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	82664336	82698583	+	82664505	82698583	A5SS	0.14	50	50	ENSMUST00000202210.4	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	82664385	82698583	+	82664505	82698583	A5SS	0.14	50	50	ENSMUST00000202210.4	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	82664586	82698583	+	82664505	82698583	A5SS	0.14	50	50	ENSMUST00000202210.4	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	82664872	82698583	+	82664505	82698583	A5SS	0.14	50	50	ENSMUST00000202210.4	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	82664385	82698583	+	82664336	82698583	A5SS	0.14	50	50	ENSMUST00000186458.7	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	82664586	82698583	+	82664336	82698583	A5SS	0.14	50	50	ENSMUST00000186458.7	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	82664872	82698583	+	82664336	82698583	A5SS	0.14	50	50	ENSMUST00000186458.7	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	83184213	83184365	+	83184213	83196959	A3SS	0.2	50	50	ENSMUST00000186081.7	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	83184213	83184374	+	83184213	83196959	A3SS	0.2	50	50	ENSMUST00000186081.7	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	83184213	83184386	+	83184213	83196959	A3SS	0.2	50	50	ENSMUST00000186081.7	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	82664586	82698583	+	82664385	82698583	A5SS	0.14	50	50	ENSMUST00000201271.4	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	82664872	82698583	+	82664385	82698583	A5SS	0.14	50	50	ENSMUST00000201271.4	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	82664872	82698583	+	82664586	82698583	A5SS	0.14	50	50	ENSMUST00000200861.4	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	83184213	83184365	+	83184213	83184386	A3SS	0.2	50	50	ENSMUST00000191311.7	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	83184213	83184374	+	83184213	83184386	A3SS	0.2	50	50	ENSMUST00000191311.7	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	83184213	83184374	+	83184213	83184365	A3SS	0.2	50	50	ENSMUST00000191352.7	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	83180518	83204695	+	83180518	83184160	3pMXE	0.33	50	50	ENSMUST00000201512.2	ENSMUSG00000021219.17	Rgs6	chr12	protein_coding	regulator of G-protein signaling 6
chr12	83307657	83319113	-	83273154	83319113	A3SS	0.33	50	50	ENSMUST00000147469.8	ENSMUSG00000021221.16	Dpf3	chr12	protein_coding	D4, zinc and double PHD fingers, family 3
chr12	83316401	83319113	-	83273154	83319113	A3SS	0.33	50	50	ENSMUST00000147469.8	ENSMUSG00000021221.16	Dpf3	chr12	protein_coding	D4, zinc and double PHD fingers, family 3
chr12	83378761	83397562	-	83378764	83397562	A3SS	0.5	50	50	ENSMUST00000147469.8	ENSMUSG00000021221.16	Dpf3	chr12	protein_coding	D4, zinc and double PHD fingers, family 3
chr12	83316401	83319113	-	83307657	83319113	A3SS	0.33	50	50	ENSMUST00000140327.8	ENSMUSG00000021221.16	Dpf3	chr12	protein_coding	D4, zinc and double PHD fingers, family 3
chr12	83577680	83578511	+	83577680	83579053	A3SS	0.5	50	50	ENSMUST00000021645.9	ENSMUSG00000021222.10	Dcaf4	chr12	protein_coding	DDB1 and CUL4 associated factor 4
chr12	83567654	83572918	+	83567391	83572918	A5SS	0.33	50	50	ENSMUST00000021645.9	ENSMUSG00000021222.10	Dcaf4	chr12	protein_coding	DDB1 and CUL4 associated factor 4
chr12	83571832	83572918	+	83567391	83572918	A5SS	0.33	50	50	ENSMUST00000021645.9	ENSMUSG00000021222.10	Dcaf4	chr12	protein_coding	DDB1 and CUL4 associated factor 4
chr12	83571832	83572918	+	83567654	83572918	A5SS	0.33	50	50	ENSMUST00000222502.2	ENSMUSG00000021222.10	Dcaf4	chr12	protein_coding	DDB1 and CUL4 associated factor 4
chr12	83642096	83643771	-	83642096;83643378	83643178;83643771	ES	0.5	50	50	ENSMUST00000221919.2	ENSMUSG00000042628.9	Zfyve1	chr12	protein_coding	zinc finger, FYVE domain containing 1
chr12	83605494	83609124	-	83605494	83615623	A5SS	0.5	50	50	ENSMUST00000221919.2	ENSMUSG00000042628.9	Zfyve1	chr12	protein_coding	zinc finger, FYVE domain containing 1
chr12	83642096	83643771	-	83642096	83643178	5pMXE	0.5	50	50	ENSMUST00000223380.2	ENSMUSG00000042628.9	Zfyve1	chr12	protein_coding	zinc finger, FYVE domain containing 1
chr12	83693078	83698061	+	83693078;83695029	83694972;83698061	ES	0.5	50	50	ENSMUST00000181983.8	ENSMUSG00000010608.16	Rbm25	chr12	protein_coding	RNA binding motif protein 25
chr12	83678396;83685965	83685902;83689403	+	83678396	83689403	cassetteExon	0.5	100	100	ENSMUST00000181983.8	ENSMUSG00000010608.16	Rbm25	chr12	protein_coding	RNA binding motif protein 25
chr12	83698218;83698524	83698420;83706197	+	83698218	83706197	cassetteExon	0.5	100	100	ENSMUST00000181983.8	ENSMUSG00000010608.16	Rbm25	chr12	protein_coding	RNA binding motif protein 25
chr12	83679191	83689403	+	83678396	83689403	A5SS	0.25	50	50	ENSMUST00000181983.8	ENSMUSG00000010608.16	Rbm25	chr12	protein_coding	RNA binding motif protein 25
chr12	83689293	83689403	+	83678396	83689403	A5SS	0.25	50	50	ENSMUST00000181983.8	ENSMUSG00000010608.16	Rbm25	chr12	protein_coding	RNA binding motif protein 25
chr12	83710006	83710753	+	83707452	83710753	A5SS	0.5	50	50	ENSMUST00000181983.8	ENSMUSG00000010608.16	Rbm25	chr12	protein_coding	RNA binding motif protein 25
chr12	83685965;83689293	83689176;83689403	+	83685965	83689403	cassetteExon	0.5	100	100	ENSMUST00000182004.8	ENSMUSG00000010608.16	Rbm25	chr12	protein_coding	RNA binding motif protein 25
chr12	83679191	83685902	+	83678396	83685902	A5SS	0.5	50	50	ENSMUST00000182004.8	ENSMUSG00000010608.16	Rbm25	chr12	protein_coding	RNA binding motif protein 25
chr12	83679191	83689403	+	83685965	83689403	A5SS&ES	0.25	50	50	ENSMUST00000182004.8	ENSMUSG00000010608.16	Rbm25	chr12	protein_coding	RNA binding motif protein 25
chr12	83679191;83685965	83685902;83689403	+	83679191	83689403	cassetteExon	0.5	100	100	ENSMUST00000048155.16	ENSMUSG00000010608.16	Rbm25	chr12	protein_coding	RNA binding motif protein 25
chr12	83679191;83689293	83689176;83689403	+	83679191	83689403	cassetteExon	0.5	100	100	ENSMUST00000048155.16	ENSMUSG00000010608.16	Rbm25	chr12	protein_coding	RNA binding motif protein 25
chr12	83721437;83721663	83721590;83721818	+	83721437	83721818	cassetteExon	0.5	100	100	ENSMUST00000048155.16	ENSMUSG00000010608.16	Rbm25	chr12	protein_coding	RNA binding motif protein 25
chr12	83679191;83685965	83685902;83689176	+	83679191	83689176	cassetteExon	0.5	100	100	ENSMUST00000182618.8	ENSMUSG00000010608.16	Rbm25	chr12	protein_coding	RNA binding motif protein 25
chr12	83679191;83685965	83685902;83689403	+	83679191;83689293	83689176;83689403	MXE	0.5	100	100	ENSMUST00000182618.8	ENSMUSG00000010608.16	Rbm25	chr12	protein_coding	RNA binding motif protein 25
chr12	83679191;83686149	83685902;83689176	+	83679191	83689176	cassetteExon	0.5	100	100	ENSMUST00000182618.8	ENSMUSG00000010608.16	Rbm25	chr12	protein_coding	RNA binding motif protein 25
chr12	83686149	83689176	+	83685965	83689176	A5SS	0.33	50	50	ENSMUST00000183154.8	ENSMUSG00000010608.16	Rbm25	chr12	protein_coding	RNA binding motif protein 25
chr12	83685965	83689403	+	83689293	83689403	A5SS&ES	0.33	50	50	ENSMUST00000182347.8	ENSMUSG00000010608.16	Rbm25	chr12	protein_coding	RNA binding motif protein 25
chr12	83698218	83706197	+	83698218	83698420	3pMXE	0.5	50	50	ENSMUST00000183039.2	ENSMUSG00000010608.16	Rbm25	chr12	protein_coding	RNA binding motif protein 25
chr12	83735067	83746375	+	83735067	83746129	A3SS&ES	0.5	50	50	ENSMUST00000041806.13	ENSMUSG00000019969.15	Psen1	chr12	protein_coding	presenilin 1
chr12	83735707	83746129	+	83735067	83746129	A5SS	0.5	50	50	ENSMUST00000041806.13	ENSMUSG00000019969.15	Psen1	chr12	protein_coding	presenilin 1
chr12	83822243	83823128	+	83822243;83822688	83822623;83823128	ES	0.5	50	50	ENSMUST00000121733.8	ENSMUSG00000021223.14	Papln	chr12	protein_coding	papilin, proteoglycan-like sulfated glycoprotein
chr12	83858134	83888992	-	83858134;83878770	83878696;83888992	ES	0.5	50	50	ENSMUST00000117217.8	ENSMUSG00000021224.16	Numb	chr12	protein_coding	NUMB endocytic adaptor protein
chr12	83889132	83923442	-	83889132;83902298	83902214;83923442	ES	0.5	50	50	ENSMUST00000117217.8	ENSMUSG00000021224.16	Numb	chr12	protein_coding	NUMB endocytic adaptor protein
chr12	83842928;83844117	83843971;83846282	-	83842928	83846282	cassetteExon	0.5	100	100	ENSMUST00000117217.8	ENSMUSG00000021224.16	Numb	chr12	protein_coding	NUMB endocytic adaptor protein
chr12	83858134;83872065	83872033;83878696	-	83858134	83878696	cassetteExon	0.5	100	100	ENSMUST00000117217.8	ENSMUSG00000021224.16	Numb	chr12	protein_coding	NUMB endocytic adaptor protein
chr12	83846297	83847787	-	83846431	83847787	A3SS	0.5	50	50	ENSMUST00000117217.8	ENSMUSG00000021224.16	Numb	chr12	protein_coding	NUMB endocytic adaptor protein
chr12	83858079	83878696	-	83858134	83878696	A3SS	0.33	50	50	ENSMUST00000117217.8	ENSMUSG00000021224.16	Numb	chr12	protein_coding	NUMB endocytic adaptor protein
chr12	83923586	83968414	-	83923586	83968592	A5SS	0.5	50	50	ENSMUST00000117217.8	ENSMUSG00000021224.16	Numb	chr12	protein_coding	NUMB endocytic adaptor protein
chr12	83858134	83888992	-	83878770	83888992	A3SS&ES	0.5	50	50	ENSMUST00000110298.9	ENSMUSG00000021224.16	Numb	chr12	protein_coding	NUMB endocytic adaptor protein
chr12	83872065	83878696	-	83858079	83878696	A3SS	0.33	50	50	ENSMUST00000110298.9	ENSMUSG00000021224.16	Numb	chr12	protein_coding	NUMB endocytic adaptor protein
chr12	83858134	83872033	-	83858134	83888992	A5SS	0.33	50	50	ENSMUST00000126943.2	ENSMUSG00000021224.16	Numb	chr12	protein_coding	NUMB endocytic adaptor protein
chr12	83992339	83997386	-	83992339	83997155	5pMXE	0.25	50	50	ENSMUST00000221865.2	ENSMUSG00000096953.3	Gm26571	chr12	lncRNA	predicted gene, 26571
chr12	83992339	83997479	-	83992339	83997155	5pMXE	0.25	50	50	ENSMUST00000221865.2	ENSMUSG00000096953.3	Gm26571	chr12	lncRNA	predicted gene, 26571
chr12	83992339	83997343	-	83992339	83997155	A5SS	0.25	50	50	ENSMUST00000221865.2	ENSMUSG00000096953.3	Gm26571	chr12	lncRNA	predicted gene, 26571
chr12	83992339	83997343	-	83992339	83997479	A5SS	0.25	50	50	ENSMUST00000222424.2	ENSMUSG00000096953.3	Gm26571	chr12	lncRNA	predicted gene, 26571
chr12	83992339	83997386	-	83992339	83997479	A5SS	0.25	50	50	ENSMUST00000222424.2	ENSMUSG00000096953.3	Gm26571	chr12	lncRNA	predicted gene, 26571
chr12	83992339	83997386	-	83992339	83997343	A5SS	0.25	50	50	ENSMUST00000220615.2	ENSMUSG00000096953.3	Gm26571	chr12	lncRNA	predicted gene, 26571
chr12	84061355	84063855	+	84061355	84063554	A3SS	0.5	50	50	ENSMUST00000168120.3	ENSMUSG00000072949.7	Acot1	chr12	protein_coding	acyl-CoA thioesterase 1
chr12	84057040	84061153	+	84056740	84061153	A5SS	0.5	50	50	ENSMUST00000168120.3	ENSMUSG00000072949.7	Acot1	chr12	protein_coding	acyl-CoA thioesterase 1
chr12	84089610	84089965	+	84088813	84089965	A5SS	0.5	50	50	ENSMUST00000021652.5	ENSMUSG00000052392.6	Acot4	chr12	protein_coding	acyl-CoA thioesterase 4
chr12	84085741	84103683	+	84085741	84088611	3pMXE	0.5	50	50	ENSMUST00000128162.2	ENSMUSG00000052392.6	Acot4	chr12	protein_coding	acyl-CoA thioesterase 4
chr12	84103885	84105502	+	84103885	84105195	3pMXE	0.5	50	50	ENSMUST00000221229.2	ENSMUSG00000113475.2	Gm49366	chr12	protein_coding	predicted gene, 49366
chr12	84100715	84103683	+	84085741	84103683	A5SS	0.5	50	50	ENSMUST00000221229.2	ENSMUSG00000113475.2	Gm49366	chr12	protein_coding	predicted gene, 49366
chr12	84098954	84099500	+	84098954	84100247	A3SS	0.5	50	50	ENSMUST00000120927.8	ENSMUSG00000021228.16	Acot3	chr12	protein_coding	acyl-CoA thioesterase 3
chr12	84183411	84193889	+	84183411	84185128	3pMXE	0.5	50	50	ENSMUST00000143753.8	ENSMUSG00000042523.13	Dnal1	chr12	protein_coding	dynein, axonemal, light chain 1
chr12	84168095;84171358	84171249;84173736	+	84168095	84173736	cassetteExon	0.5	100	100	ENSMUST00000143753.8	ENSMUSG00000042523.13	Dnal1	chr12	protein_coding	dynein, axonemal, light chain 1
chr12	84161173	84167929	+	84161173	84168057	A3SS	0.5	50	50	ENSMUST00000143753.8	ENSMUSG00000042523.13	Dnal1	chr12	protein_coding	dynein, axonemal, light chain 1
chr12	84178161	84180626	+	84178161	84182341	A3SS	0.33	50	50	ENSMUST00000143753.8	ENSMUSG00000042523.13	Dnal1	chr12	protein_coding	dynein, axonemal, light chain 1
chr12	84178161	84182345	+	84178161	84182341	A3SS	0.33	50	50	ENSMUST00000143753.8	ENSMUSG00000042523.13	Dnal1	chr12	protein_coding	dynein, axonemal, light chain 1
chr12	84173344	84173736	+	84168095	84173736	A5SS	0.33	50	50	ENSMUST00000143753.8	ENSMUSG00000042523.13	Dnal1	chr12	protein_coding	dynein, axonemal, light chain 1
chr12	84171358;84173344	84173305;84173736	+	84171358	84173736	cassetteExon	0.5	100	100	ENSMUST00000123491.8	ENSMUSG00000042523.13	Dnal1	chr12	protein_coding	dynein, axonemal, light chain 1
chr12	84178161	84182345	+	84178161	84180626	3pMXE	0.33	50	50	ENSMUST00000136159.2	ENSMUSG00000042523.13	Dnal1	chr12	protein_coding	dynein, axonemal, light chain 1
chr12	84221197	84240273	-	84221197	84265549	A5SS	0.5	50	50	ENSMUST00000046266.13	ENSMUSG00000042507.16	Mideas	chr12	protein_coding	mitotic deacetylase associated SANT domain protein
chr12	84344976	84352700	+	84344976;84349181	84349011;84352700	ES	0.5	50	50	ENSMUST00000123614.8	ENSMUSG00000072946.13	Ptgr2	chr12	protein_coding	prostaglandin reductase 2
chr12	84342109;84343130	84343002;84344785	+	84342109	84344785	cassetteExon	0.5	100	100	ENSMUST00000123614.8	ENSMUSG00000072946.13	Ptgr2	chr12	protein_coding	prostaglandin reductase 2
chr12	84355206	84355949	+	84355206	84357693	A3SS	0.33	50	50	ENSMUST00000123614.8	ENSMUSG00000072946.13	Ptgr2	chr12	protein_coding	prostaglandin reductase 2
chr12	84355206	84357677	+	84355206	84357693	A3SS	0.33	50	50	ENSMUST00000123614.8	ENSMUSG00000072946.13	Ptgr2	chr12	protein_coding	prostaglandin reductase 2
chr12	84332307	84339058	+	84332250	84339058	A5SS	0.5	50	50	ENSMUST00000123614.8	ENSMUSG00000072946.13	Ptgr2	chr12	protein_coding	prostaglandin reductase 2
chr12	84344976	84352700	+	84344976	84349011	3pMXE	0.33	50	50	ENSMUST00000138733.8	ENSMUSG00000072946.13	Ptgr2	chr12	protein_coding	prostaglandin reductase 2
chr12	84344976	84354550	+	84344976	84349011	3pMXE	0.33	50	50	ENSMUST00000138733.8	ENSMUSG00000072946.13	Ptgr2	chr12	protein_coding	prostaglandin reductase 2
chr12	84355206	84357677	+	84355206	84355949	3pMXE	0.33	50	50	ENSMUST00000147363.8	ENSMUSG00000072946.13	Ptgr2	chr12	protein_coding	prostaglandin reductase 2
chr12	84344976;84352909	84352700;84354550	+	84344976	84354550	cassetteExon	0.5	100	100	ENSMUST00000128541.8	ENSMUSG00000072946.13	Ptgr2	chr12	protein_coding	prostaglandin reductase 2
chr12	84344976	84354550	+	84344976	84352700	3pMXE	0.33	50	50	ENSMUST00000150720.8	ENSMUSG00000072946.13	Ptgr2	chr12	protein_coding	prostaglandin reductase 2
chr12	84363948	84369658	+	84363948;84368765	84368586;84369658	ES	0.5	50	50	ENSMUST00000045931.12	ENSMUSG00000042472.12	Zfp410	chr12	protein_coding	zinc finger protein 410
chr12	84363948;84366835	84366629;84368586	+	84363948	84368586	cassetteExon	0.5	100	100	ENSMUST00000045931.12	ENSMUSG00000042472.12	Zfp410	chr12	protein_coding	zinc finger protein 410
chr12	84363948;84366945	84366629;84368586	+	84363948	84368586	cassetteExon	0.5	100	100	ENSMUST00000045931.12	ENSMUSG00000042472.12	Zfp410	chr12	protein_coding	zinc finger protein 410
chr12	84385556;84386027	84385825;84386876	+	84385556	84386876	cassetteExon	0.5	100	100	ENSMUST00000045931.12	ENSMUSG00000042472.12	Zfp410	chr12	protein_coding	zinc finger protein 410
chr12	84369793	84372377	+	84369793	84372345	A3SS	0.5	50	50	ENSMUST00000045931.12	ENSMUSG00000042472.12	Zfp410	chr12	protein_coding	zinc finger protein 410
chr12	84372563	84372637	+	84372563	84374053	A3SS	0.33	50	50	ENSMUST00000045931.12	ENSMUSG00000042472.12	Zfp410	chr12	protein_coding	zinc finger protein 410
chr12	84372563	84374091	+	84372563	84374053	A3SS	0.33	50	50	ENSMUST00000045931.12	ENSMUSG00000042472.12	Zfp410	chr12	protein_coding	zinc finger protein 410
chr12	84379798	84380563	+	84379798	84384390	A3SS	0.33	50	50	ENSMUST00000045931.12	ENSMUSG00000042472.12	Zfp410	chr12	protein_coding	zinc finger protein 410
chr12	84379798	84381842	+	84379798	84384390	A3SS	0.33	50	50	ENSMUST00000045931.12	ENSMUSG00000042472.12	Zfp410	chr12	protein_coding	zinc finger protein 410
chr12	84363983	84368586	+	84363948	84368586	A5SS	0.25	50	50	ENSMUST00000045931.12	ENSMUSG00000042472.12	Zfp410	chr12	protein_coding	zinc finger protein 410
chr12	84363948	84372345	+	84363948	84368586	A3SS&ES	0.25	50	50	ENSMUST00000221490.2	ENSMUSG00000042472.12	Zfp410	chr12	protein_coding	zinc finger protein 410
chr12	84363983	84368586	+	84366835	84368586	A5SS&ES	0.25	50	50	ENSMUST00000223355.2	ENSMUSG00000042472.12	Zfp410	chr12	protein_coding	zinc finger protein 410
chr12	84366945	84368586	+	84366835	84368586	A5SS	0.25	50	50	ENSMUST00000223355.2	ENSMUSG00000042472.12	Zfp410	chr12	protein_coding	zinc finger protein 410
chr12	84363948	84369658	+	84368765	84369658	A5SS&ES	0.5	50	50	ENSMUST00000222258.2	ENSMUSG00000042472.12	Zfp410	chr12	protein_coding	zinc finger protein 410
chr12	84363948	84372345	+	84369793	84372345	A5SS&ES	0.5	50	50	ENSMUST00000222258.2	ENSMUSG00000042472.12	Zfp410	chr12	protein_coding	zinc finger protein 410
chr12	84366945	84368586	+	84363983	84368586	A5SS	0.25	50	50	ENSMUST00000222258.2	ENSMUSG00000042472.12	Zfp410	chr12	protein_coding	zinc finger protein 410
chr12	84372563	84374091	+	84372563	84372637	A3SS	0.33	50	50	ENSMUST00000222431.2	ENSMUSG00000042472.12	Zfp410	chr12	protein_coding	zinc finger protein 410
chr12	84363948	84372345	+	84363948;84369793	84369658;84372345	ES	0.5	50	50	ENSMUST00000222832.2	ENSMUSG00000042472.12	Zfp410	chr12	protein_coding	zinc finger protein 410
chr12	84363948	84366629	+	84363948	84369658	A3SS	0.25	50	50	ENSMUST00000222832.2	ENSMUSG00000042472.12	Zfp410	chr12	protein_coding	zinc finger protein 410
chr12	84379798	84380563	+	84379798	84381842	A3SS	0.33	50	50	ENSMUST00000220931.2	ENSMUSG00000042472.12	Zfp410	chr12	protein_coding	zinc finger protein 410
chr12	84374244	84384390	+	84374244	84376576	3pMXE	0.5	50	50	ENSMUST00000221656.2	ENSMUSG00000042472.12	Zfp410	chr12	protein_coding	zinc finger protein 410
chr12	84363948	84366629	+	84363948	84372345	A3SS	0.25	50	50	ENSMUST00000222773.2	ENSMUSG00000042472.12	Zfp410	chr12	protein_coding	zinc finger protein 410
chr12	84379798	84384390	+	84374244	84384390	A5SS	0.5	50	50	ENSMUST00000222471.2	ENSMUSG00000042472.12	Zfp410	chr12	protein_coding	zinc finger protein 410
chr12	84417944	84418178	+	84417944	84418225	A3SS	0.5	50	50	ENSMUST00000110276.8	ENSMUSG00000021235.14	Coq6	chr12	protein_coding	coenzyme Q6 monooxygenase
chr12	84419308	84420459	+	84419308	84419425	A3SS&ES	0.5	50	50	ENSMUST00000110276.8	ENSMUSG00000021235.14	Coq6	chr12	protein_coding	coenzyme Q6 monooxygenase
chr12	84417128	84417698	+	84417160	84417698	A5SS	0.5	50	50	ENSMUST00000110276.8	ENSMUSG00000021235.14	Coq6	chr12	protein_coding	coenzyme Q6 monooxygenase
chr12	84418305	84418913	+	84418332	84418913	A5SS	0.5	50	50	ENSMUST00000110276.8	ENSMUSG00000021235.14	Coq6	chr12	protein_coding	coenzyme Q6 monooxygenase
chr12	84443732	84452180	-	84443732;84446186	84446114;84452180	ES	0.33	50	50	ENSMUST00000021662.12	ENSMUSG00000021236.17	Entpd5	chr12	protein_coding	ectonucleoside triphosphate diphosphohydrolase 5
chr12	84450917	84452180	-	84446186	84452180	A3SS	0.33	50	50	ENSMUST00000021662.12	ENSMUSG00000021236.17	Entpd5	chr12	protein_coding	ectonucleoside triphosphate diphosphohydrolase 5
chr12	84443732	84447604	-	84443732	84446114	A5SS&ES	0.33	50	50	ENSMUST00000021662.12	ENSMUSG00000021236.17	Entpd5	chr12	protein_coding	ectonucleoside triphosphate diphosphohydrolase 5
chr12	84446186	84447604	-	84446186	84452180	A5SS	0.5	50	50	ENSMUST00000021662.12	ENSMUSG00000021236.17	Entpd5	chr12	protein_coding	ectonucleoside triphosphate diphosphohydrolase 5
chr12	84450917	84452180	-	84443732	84452180	A3SS	0.33	50	50	ENSMUST00000072061.12	ENSMUSG00000021236.17	Entpd5	chr12	protein_coding	ectonucleoside triphosphate diphosphohydrolase 5
chr12	84443732	84447604	-	84443732	84452180	A5SS	0.33	50	50	ENSMUST00000072061.12	ENSMUSG00000021236.17	Entpd5	chr12	protein_coding	ectonucleoside triphosphate diphosphohydrolase 5
chr12	84443732	84447604	-	84443732;84446186	84446114;84447604	ES	0.5	50	50	ENSMUST00000122194.8	ENSMUSG00000021236.17	Entpd5	chr12	protein_coding	ectonucleoside triphosphate diphosphohydrolase 5
chr12	84472054	84475117	+	84472054;84473975	84473482;84475117	ES	0.33	50	50	ENSMUST00000081828.13	ENSMUSG00000057265.14	Bbof1	chr12	protein_coding	basal body orientation factor 1
chr12	84477107	84487639	+	84477107	84480075	3pMXE	0.5	50	50	ENSMUST00000081828.13	ENSMUSG00000057265.14	Bbof1	chr12	protein_coding	basal body orientation factor 1
chr12	84470277;84472054	84471910;84475117	+	84470277	84475117	cassetteExon	0.5	100	100	ENSMUST00000151789.8	ENSMUSG00000057265.14	Bbof1	chr12	protein_coding	basal body orientation factor 1
chr12	84473975	84475117	+	84470277	84475117	A5SS	0.33	50	50	ENSMUST00000151789.8	ENSMUSG00000057265.14	Bbof1	chr12	protein_coding	basal body orientation factor 1
chr12	84488698	84490503	-	84488698;84488919	84488845;84490503	ES	0.5	50	50	ENSMUST00000222641.2	ENSMUSG00000021238.12	Aldh6a1	chr12	protein_coding	aldehyde dehydrogenase family 6, subfamily A1
chr12	84490562	84497663	-	84490562	84494905	5pMXE	0.5	50	50	ENSMUST00000222641.2	ENSMUSG00000021238.12	Aldh6a1	chr12	protein_coding	aldehyde dehydrogenase family 6, subfamily A1
chr12	84486631	84487009	-	84486489	84487009	A3SS	0.5	50	50	ENSMUST00000222641.2	ENSMUSG00000021238.12	Aldh6a1	chr12	protein_coding	aldehyde dehydrogenase family 6, subfamily A1
chr12	84488698	84490503	-	84488698	84488845	A5SS	0.5	50	50	ENSMUST00000222062.2	ENSMUSG00000021238.12	Aldh6a1	chr12	protein_coding	aldehyde dehydrogenase family 6, subfamily A1
chr12	84509226	84592679	+	84509226	84576464	3pMXE	0.5	50	50	ENSMUST00000137170.3	ENSMUSG00000085793.3	Lin52	chr12	protein_coding	lin-52 homolog (C. elegans)
chr12	84639125	84639846	+	84639125	84639903	A3SS	0.5	50	50	ENSMUST00000021665.12	ENSMUSG00000021239.13	Vsx2	chr12	protein_coding	visual system homeobox 2
chr12	84649933	84650723	-	84649933;84650183	84650068;84650723	ES	0.5	50	50	ENSMUST00000222581.2	ENSMUSG00000021240.7	Abcd4	chr12	protein_coding	ATP-binding cassette, sub-family D (ALD), member 4
chr12	84652737	84652874	-	84652756	84652874	A3SS	0.5	50	50	ENSMUST00000222581.2	ENSMUSG00000021240.7	Abcd4	chr12	protein_coding	ATP-binding cassette, sub-family D (ALD), member 4
chr12	84658355	84658495	-	84656247	84658495	A3SS	0.5	50	50	ENSMUST00000222581.2	ENSMUSG00000021240.7	Abcd4	chr12	protein_coding	ATP-binding cassette, sub-family D (ALD), member 4
chr12	84659219	84660679	-	84659670	84660679	A3SS&ES	0.5	50	50	ENSMUST00000222581.2	ENSMUSG00000021240.7	Abcd4	chr12	protein_coding	ATP-binding cassette, sub-family D (ALD), member 4
chr12	84659224	84659554	-	84659357	84659554	A3SS	0.5	50	50	ENSMUST00000222581.2	ENSMUSG00000021240.7	Abcd4	chr12	protein_coding	ATP-binding cassette, sub-family D (ALD), member 4
chr12	84659627	84661851	-	84660818	84661851	A3SS&ES	0.5	50	50	ENSMUST00000222581.2	ENSMUSG00000021240.7	Abcd4	chr12	protein_coding	ATP-binding cassette, sub-family D (ALD), member 4
chr12	84661978	84663896	-	84661978	84662100	A5SS&ES	0.5	50	50	ENSMUST00000222581.2	ENSMUSG00000021240.7	Abcd4	chr12	protein_coding	ATP-binding cassette, sub-family D (ALD), member 4
chr12	84662218	84663896	-	84662218	84664057	A5SS	0.5	50	50	ENSMUST00000222581.2	ENSMUSG00000021240.7	Abcd4	chr12	protein_coding	ATP-binding cassette, sub-family D (ALD), member 4
chr12	84661978	84663896	-	84661978;84662218	84662100;84663896	ES	0.5	50	50	ENSMUST00000223107.2	ENSMUSG00000021240.7	Abcd4	chr12	protein_coding	ATP-binding cassette, sub-family D (ALD), member 4
chr12	84649933	84650723	-	84649933	84650068	A5SS	0.5	50	50	ENSMUST00000221948.2	ENSMUSG00000021240.7	Abcd4	chr12	protein_coding	ATP-binding cassette, sub-family D (ALD), member 4
chr12	84689718	84695251	+	84687911	84695251	A5SS	0.33	50	50	ENSMUST00000221915.2	ENSMUSG00000071235.13	Vrtn	chr12	protein_coding	vertebrae development associated
chr12	84689932	84695251	+	84687911	84695251	A5SS	0.33	50	50	ENSMUST00000221915.2	ENSMUSG00000071235.13	Vrtn	chr12	protein_coding	vertebrae development associated
chr12	84689718	84695251	+	84689932	84695251	A5SS&ES	0.5	50	50	ENSMUST00000222319.2	ENSMUSG00000071235.13	Vrtn	chr12	protein_coding	vertebrae development associated
chr12	84727626;84730091	84729990;84745300	-	84727626	84745300	cassetteExon	0.5	100	100	ENSMUST00000095550.4	ENSMUSG00000071234.4	Syndig1l	chr12	protein_coding	synapse differentiation inducing 1 like
chr12	84727626;84730094	84729990;84745300	-	84727626	84745300	cassetteExon	0.5	100	100	ENSMUST00000095550.4	ENSMUSG00000071234.4	Syndig1l	chr12	protein_coding	synapse differentiation inducing 1 like
chr12	84730094	84745300	-	84730091	84745300	A3SS	0.33	50	50	ENSMUST00000222422.2	ENSMUSG00000071234.4	Syndig1l	chr12	protein_coding	synapse differentiation inducing 1 like
chr12	84820451	84821317	+	84820451;84820682	84820567;84821317	ES	0.5	50	50	ENSMUST00000021667.7	ENSMUSG00000021241.8	Isca2	chr12	protein_coding	iron-sulfur cluster assembly 2
chr12	84820145	84820370	+	84820145	84820349	A3SS	0.5	50	50	ENSMUST00000021667.7	ENSMUSG00000021241.8	Isca2	chr12	protein_coding	iron-sulfur cluster assembly 2
chr12	84820451	84821317	+	84820682	84821317	5pMXE	0.5	50	50	ENSMUST00000220726.2	ENSMUSG00000021241.8	Isca2	chr12	protein_coding	iron-sulfur cluster assembly 2
chr12	84838718	84840393	-	84838718;84839856	84839731;84840393	ES	0.5	50	50	ENSMUST00000002073.13	ENSMUSG00000002020.16	Ltbp2	chr12	protein_coding	latent transforming growth factor beta binding protein 2
chr12	84846265	84851131	-	84846265;84850689	84850561;84851131	ES	0.5	50	50	ENSMUST00000002073.13	ENSMUSG00000002020.16	Ltbp2	chr12	protein_coding	latent transforming growth factor beta binding protein 2
chr12	84837147	84838596	-	84838496	84838596	A3SS&ES	0.5	50	50	ENSMUST00000166383.2	ENSMUSG00000002020.16	Ltbp2	chr12	protein_coding	latent transforming growth factor beta binding protein 2
chr12	84838718	84840393	-	84838718	84839731	5pMXE	0.5	50	50	ENSMUST00000163214.2	ENSMUSG00000002020.16	Ltbp2	chr12	protein_coding	latent transforming growth factor beta binding protein 2
chr12	84837147	84837769	-	84837147	84838596	A5SS	0.5	50	50	ENSMUST00000163214.2	ENSMUSG00000002020.16	Ltbp2	chr12	protein_coding	latent transforming growth factor beta binding protein 2
chr12	84981897	84988505	-	84981897;84987171	84986934;84988505	ES	0.5	50	50	ENSMUST00000163231.8	ENSMUSG00000042350.14	Arel1	chr12	protein_coding	apoptosis resistant E3 ubiquitin protein ligase 1
chr12	84973187;84974184	84974075;84974643	-	84973187	84974643	cassetteExon	0.5	100	100	ENSMUST00000163231.8	ENSMUSG00000042350.14	Arel1	chr12	protein_coding	apoptosis resistant E3 ubiquitin protein ligase 1
chr12	84990166	84992064	-	84990166	84997827	A5SS	0.25	50	50	ENSMUST00000163231.8	ENSMUSG00000042350.14	Arel1	chr12	protein_coding	apoptosis resistant E3 ubiquitin protein ligase 1
chr12	84990166	84993579	-	84990166	84997827	A5SS	0.25	50	50	ENSMUST00000163231.8	ENSMUSG00000042350.14	Arel1	chr12	protein_coding	apoptosis resistant E3 ubiquitin protein ligase 1
chr12	84990166	85017472	-	84990166	84997827	A5SS&ES	0.25	50	50	ENSMUST00000163231.8	ENSMUSG00000042350.14	Arel1	chr12	protein_coding	apoptosis resistant E3 ubiquitin protein ligase 1
chr12	84998155	84998965	-	84998155	85017403	A5SS	0.33	50	50	ENSMUST00000163231.8	ENSMUSG00000042350.14	Arel1	chr12	protein_coding	apoptosis resistant E3 ubiquitin protein ligase 1
chr12	84998155	85017472	-	84998155	85017403	A5SS	0.33	50	50	ENSMUST00000163231.8	ENSMUSG00000042350.14	Arel1	chr12	protein_coding	apoptosis resistant E3 ubiquitin protein ligase 1
chr12	84981897	84988505	-	84987171	84988505	3pMXE	0.5	50	50	ENSMUST00000169161.8	ENSMUSG00000042350.14	Arel1	chr12	protein_coding	apoptosis resistant E3 ubiquitin protein ligase 1
chr12	84990166	85017472	-	84990166	84993579	5pMXE	0.25	50	50	ENSMUST00000169161.8	ENSMUSG00000042350.14	Arel1	chr12	protein_coding	apoptosis resistant E3 ubiquitin protein ligase 1
chr12	84990166	84992064	-	84990166	84993579	A5SS	0.25	50	50	ENSMUST00000169161.8	ENSMUSG00000042350.14	Arel1	chr12	protein_coding	apoptosis resistant E3 ubiquitin protein ligase 1
chr12	84990166	85017472	-	84990166	84992064	5pMXE	0.25	50	50	ENSMUST00000165093.8	ENSMUSG00000042350.14	Arel1	chr12	protein_coding	apoptosis resistant E3 ubiquitin protein ligase 1
chr12	84990166	85017472	-	84990166;84998155	84997827;85017472	ES	0.5	50	50	ENSMUST00000167448.8	ENSMUSG00000042350.14	Arel1	chr12	protein_coding	apoptosis resistant E3 ubiquitin protein ligase 1
chr12	84998155	84998965	-	84998155	85017472	A5SS	0.33	50	50	ENSMUST00000167448.8	ENSMUSG00000042350.14	Arel1	chr12	protein_coding	apoptosis resistant E3 ubiquitin protein ligase 1
chr12	85017817	85017989	+	85017739	85017989	A5SS	0.5	50	50	ENSMUST00000021669.15	ENSMUSG00000021243.15	Fcf1	chr12	protein_coding	FCF1 rRNA processing protein
chr12	85104076	85111745	+	85104076;85107088	85107037;85111745	ES	0.5	50	50	ENSMUST00000168977.8	ENSMUSG00000021244.16	Ylpm1	chr12	protein_coding	YLP motif containing 1
chr12	85062367	85075544	+	85062367	85080691	A3SS	0.5	50	50	ENSMUST00000168977.8	ENSMUSG00000021244.16	Ylpm1	chr12	protein_coding	YLP motif containing 1
chr12	85077661	85080691	+	85062367	85080691	A5SS	0.5	50	50	ENSMUST00000168977.8	ENSMUSG00000021244.16	Ylpm1	chr12	protein_coding	YLP motif containing 1
chr12	85062367	85080691	+	85062367;85077661	85075544;85080691	ES	0.5	50	50	ENSMUST00000021670.15	ENSMUSG00000021244.16	Ylpm1	chr12	protein_coding	YLP motif containing 1
chr12	85104076	85111745	+	85107088	85111745	5pMXE	0.5	50	50	ENSMUST00000167838.8	ENSMUSG00000021244.16	Ylpm1	chr12	protein_coding	YLP motif containing 1
chr12	85142389	85153049	-	85142389	85143744	5pMXE	0.5	50	50	ENSMUST00000177289.9	ENSMUSG00000042320.18	Prox2	chr12	protein_coding	prospero homeobox 2
chr12	85157733	85162047	+	85157733;85158305	85158272;85162047	ES	0.5	50	50	ENSMUST00000053811.10	ENSMUSG00000004789.11	Dlst	chr12	protein_coding	dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)
chr12	85175215	85177234	+	85175215;85176639	85176566;85177234	ES	0.5	50	50	ENSMUST00000053811.10	ENSMUSG00000004789.11	Dlst	chr12	protein_coding	dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)
chr12	85172857	85175085	+	85170645	85175085	A5SS	0.5	50	50	ENSMUST00000053811.10	ENSMUSG00000004789.11	Dlst	chr12	protein_coding	dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)
chr12	85157733	85165133	+	85157733;85162095	85162047;85165133	ES	0.5	50	50	ENSMUST00000221288.2	ENSMUSG00000004789.11	Dlst	chr12	protein_coding	dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)
chr12	85157733	85158272	+	85157733	85165133	A3SS	0.33	50	50	ENSMUST00000221842.2	ENSMUSG00000004789.11	Dlst	chr12	protein_coding	dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)
chr12	85183615	85185427	-	85183615;85185287	85185205;85185427	ES	0.5	50	50	ENSMUST00000221972.2	ENSMUSG00000019235.10	Rps6kl1	chr12	protein_coding	ribosomal protein S6 kinase-like 1
chr12	85187250	85193637	-	85187250;85187650	85187603;85193637	ES	0.5	50	50	ENSMUST00000221972.2	ENSMUSG00000019235.10	Rps6kl1	chr12	protein_coding	ribosomal protein S6 kinase-like 1
chr12	85185519	85185852	-	85185516	85185852	A3SS	0.5	50	50	ENSMUST00000221972.2	ENSMUSG00000019235.10	Rps6kl1	chr12	protein_coding	ribosomal protein S6 kinase-like 1
chr12	85194644	85196428	-	85194644	85196398	A5SS	0.5	50	50	ENSMUST00000221972.2	ENSMUSG00000019235.10	Rps6kl1	chr12	protein_coding	ribosomal protein S6 kinase-like 1
chr12	85222569	85222674	-	85222569	85223672	A5SS	0.5	50	50	ENSMUST00000223220.2	ENSMUSG00000004791.8	Pgf	chr12	protein_coding	placental growth factor
chr12	85269613	85271329	+	85269613;85270292	85270155;85271329	ES	0.5	50	50	ENSMUST00000004910.12	ENSMUSG00000004788.12	Eif2b2	chr12	protein_coding	eukaryotic translation initiation factor 2B, subunit 2 beta
chr12	85266707	85266871	+	85266716	85266871	A5SS	0.5	50	50	ENSMUST00000004910.12	ENSMUSG00000004788.12	Eif2b2	chr12	protein_coding	eukaryotic translation initiation factor 2B, subunit 2 beta
chr12	85269613	85271329	+	85269613	85270155	3pMXE	0.5	50	50	ENSMUST00000128709.2	ENSMUSG00000004788.12	Eif2b2	chr12	protein_coding	eukaryotic translation initiation factor 2B, subunit 2 beta
chr12	85287757;85292696	85292537;85294386	-	85287757	85294386	cassetteExon	0.5	100	100	ENSMUST00000223230.2	ENSMUSG00000021245.16	Mlh3	chr12	protein_coding	mutL homolog 3
chr12	85308526;85309636	85309541;85312926	-	85308526	85312926	cassetteExon	0.5	100	100	ENSMUST00000223230.2	ENSMUSG00000021245.16	Mlh3	chr12	protein_coding	mutL homolog 3
chr12	85316248	85317339	-	85316248	85317313	A5SS	0.5	50	50	ENSMUST00000019378.8	ENSMUSG00000021245.16	Mlh3	chr12	protein_coding	mutL homolog 3
chr12	85326856	85334952	-	85326856	85327084	5pMXE	0.5	50	50	ENSMUST00000008966.13	ENSMUSG00000008822.16	Acyp1	chr12	protein_coding	acylphosphatase 1, erythrocyte (common) type
chr12	85325913	85326765	-	85319601	85326765	A3SS	0.5	50	50	ENSMUST00000008966.13	ENSMUSG00000008822.16	Acyp1	chr12	protein_coding	acylphosphatase 1, erythrocyte (common) type
chr12	85321185	85343176	+	85321185	85336326	3pMXE	0.5	50	50	ENSMUST00000239335.2	ENSMUSG00000045064.6	Zc2hc1c	chr12	protein_coding	zinc finger, C2HC-type containing 1C
chr12	85335559	85336326	+	85321185	85336326	A5SS	0.5	50	50	ENSMUST00000239335.2	ENSMUSG00000045064.6	Zc2hc1c	chr12	protein_coding	zinc finger, C2HC-type containing 1C
chr12	85337655	85343176	+	85321185	85343176	A5SS	0.5	50	50	ENSMUST00000239352.2	ENSMUSG00000045064.6	Zc2hc1c	chr12	protein_coding	zinc finger, C2HC-type containing 1C
chr12	85401680	85420609	-	85401680	85421215	A5SS	0.5	50	50	ENSMUST00000040766.9	ENSMUSG00000021248.10	Tmed10	chr12	protein_coding	transmembrane p24 trafficking protein 10
chr12	85521569	85521709	+	85520954	85521709	A5SS	0.5	50	50	ENSMUST00000021674.7	ENSMUSG00000021250.14	Fos	chr12	protein_coding	FBJ osteosarcoma oncogene
chr12	85646388	85654907	+	85646001	85654907	A5SS	0.25	50	50	ENSMUST00000177587.9	ENSMUSG00000034271.17	Jdp2	chr12	protein_coding	Jun dimerization protein 2
chr12	85646906	85654907	+	85646001	85654907	A5SS	0.25	50	50	ENSMUST00000177587.9	ENSMUSG00000034271.17	Jdp2	chr12	protein_coding	Jun dimerization protein 2
chr12	85649184	85654907	+	85646001	85654907	A5SS	0.25	50	50	ENSMUST00000177587.9	ENSMUSG00000034271.17	Jdp2	chr12	protein_coding	Jun dimerization protein 2
chr12	85646906	85654907	+	85646388	85654907	A5SS	0.25	50	50	ENSMUST00000050687.14	ENSMUSG00000034271.17	Jdp2	chr12	protein_coding	Jun dimerization protein 2
chr12	85649184	85654907	+	85646388	85654907	A5SS	0.25	50	50	ENSMUST00000050687.14	ENSMUSG00000034271.17	Jdp2	chr12	protein_coding	Jun dimerization protein 2
chr12	85649184	85654907	+	85646906	85654907	A5SS	0.25	50	50	ENSMUST00000171754.3	ENSMUSG00000034271.17	Jdp2	chr12	protein_coding	Jun dimerization protein 2
chr12	85821672	85829731	+	85794363	85829731	A5SS	0.5	50	50	ENSMUST00000040461.4	ENSMUSG00000034258.5	Flvcr2	chr12	protein_coding	feline leukemia virus subgroup C cellular receptor 2
chr12	85869022;85870208	85870073;85871245	-	85869022	85871245	cassetteExon	0.5	100	100	ENSMUST00000021676.12	ENSMUSG00000021252.12	Erg28	chr12	protein_coding	ergosterol biosynthesis 28
chr12	85869022	85871245	-	85863208	85871245	A3SS	0.33	50	50	ENSMUST00000131681.2	ENSMUSG00000021252.12	Erg28	chr12	protein_coding	ergosterol biosynthesis 28
chr12	85870208	85871245	-	85863208	85871245	A3SS	0.33	50	50	ENSMUST00000131681.2	ENSMUSG00000021252.12	Erg28	chr12	protein_coding	ergosterol biosynthesis 28
chr12	85863208	85866253	-	85863208	85871245	A5SS	0.5	50	50	ENSMUST00000131681.2	ENSMUSG00000021252.12	Erg28	chr12	protein_coding	ergosterol biosynthesis 28
chr12	85890634;85890772	85890720;85892021	+	85890634	85892021	cassetteExon	0.5	100	100	ENSMUST00000177188.8	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	85871860	85873227	+	85871505	85873227	A5SS	0.33	50	50	ENSMUST00000177188.8	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	85872119	85873227	+	85871505	85873227	A5SS	0.33	50	50	ENSMUST00000177188.8	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	85926249	85937795	+	85926249;85936014	85935933;85937795	ES	0.5	50	50	ENSMUST00000095536.10	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	85938984	85945767	+	85938984	85940529	3pMXE	0.33	50	50	ENSMUST00000095536.10	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	85911383	85912296	+	85911383	85923265	A3SS	0.5	50	50	ENSMUST00000095536.10	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	85926249	85930078	+	85926249	85935933	A3SS	0.33	50	50	ENSMUST00000095536.10	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	85938984	85940958	+	85938984	85940529	A3SS	0.33	50	50	ENSMUST00000095536.10	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	85926249	85937795	+	85926249	85930078	3pMXE	0.33	50	50	ENSMUST00000110220.9	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	85872119	85873227	+	85871860	85873227	A5SS	0.33	50	50	ENSMUST00000110220.9	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	85955629	85964449	+	85955629;85959364	85959326;85964449	ES	0.5	50	50	ENSMUST00000040179.14	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	85979582	85986100	+	85979582;85980448	85980056;85986100	ES	0.5	50	50	ENSMUST00000040179.14	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	86067377	86099917	+	86067377;86071116	86070994;86099917	ES	0.33	50	50	ENSMUST00000040179.14	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	86071116	86103288	+	86071116	86099917	3pMXE	0.5	50	50	ENSMUST00000040179.14	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	85938984;85940999	85940529;85945767	+	85938984	85945767	cassetteExon	0.5	100	100	ENSMUST00000040179.14	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	85938984;85940999	85940958;85945767	+	85938984	85945767	cassetteExon	0.5	100	100	ENSMUST00000040179.14	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	86059636;86061633	86061541;86067295	+	86059636	86067295	cassetteExon	0.5	100	100	ENSMUST00000040179.14	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	85964606	85965747	+	85964606	85965705	A3SS	0.5	50	50	ENSMUST00000040179.14	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	85980448	85986103	+	85980448	85986100	A3SS	0.5	50	50	ENSMUST00000040179.14	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	86059636	86062661	+	86059636	86067295	A3SS	0.25	50	50	ENSMUST00000040179.14	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	85964548	85965705	+	85964606	85965705	A5SS	0.5	50	50	ENSMUST00000040179.14	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	86008816	86042775	+	86003494	86042775	A5SS	0.5	50	50	ENSMUST00000040179.14	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	86059636	86099917	+	86059636	86062661	3pMXE	0.25	50	50	ENSMUST00000176695.8	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	86059636	86061541	+	86059636	86062661	A3SS	0.25	50	50	ENSMUST00000176695.8	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	86059636	86099917	+	86059636;86067377	86067295;86099917	ES	0.33	50	50	ENSMUST00000040273.14	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	85979582	85986100	+	85979582	85980056	A3SS&ES	0.5	50	50	ENSMUST00000110224.8	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	85890634	85892021	+	85890634	85890720	A3SS	0.5	50	50	ENSMUST00000124701.8	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	85955629	85964449	+	85959364	85964449	5pMXE	0.5	50	50	ENSMUST00000176460.8	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	86059636	86061541	+	86059636	86099917	A3SS	0.25	50	50	ENSMUST00000177525.8	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	86071116	86099917	+	86059636	86099917	A5SS	0.33	50	50	ENSMUST00000177525.8	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	86059636	86099917	+	86059636	86067295	A3SS&ES	0.25	50	50	ENSMUST00000175844.2	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	86067377	86099917	+	86067377	86070994	A3SS&ES	0.5	50	50	ENSMUST00000175844.2	ENSMUSG00000012609.20	Ttll5	chr12	protein_coding	tubulin tyrosine ligase-like family, member 5
chr12	86131960	86158385	+	86131960	86138617	3pMXE	0.5	50	50	ENSMUST00000221194.2	ENSMUSG00000007867.10	Ift43	chr12	protein_coding	intraflagellar transport 43
chr12	86129414	86131820	+	86129414	86131868	A3SS	0.5	50	50	ENSMUST00000221194.2	ENSMUSG00000007867.10	Ift43	chr12	protein_coding	intraflagellar transport 43
chr12	86129439	86131868	+	86129414	86131868	A5SS	0.5	50	50	ENSMUST00000221194.2	ENSMUSG00000007867.10	Ift43	chr12	protein_coding	intraflagellar transport 43
chr12	86131960;86139069	86138617;86158385	+	86131960	86158385	cassetteExon	0.5	100	100	ENSMUST00000054565.8	ENSMUSG00000007867.10	Ift43	chr12	protein_coding	intraflagellar transport 43
chr12	86158449;86185599	86185567;86186826	+	86158449	86186826	cassetteExon	0.5	100	100	ENSMUST00000054565.8	ENSMUSG00000007867.10	Ift43	chr12	protein_coding	intraflagellar transport 43
chr12	86131960	86158385	+	86139069	86158385	5pMXE	0.5	50	50	ENSMUST00000221161.2	ENSMUSG00000007867.10	Ift43	chr12	protein_coding	intraflagellar transport 43
chr12	86315835	86335574	+	86315835;86328317	86328223;86335574	ES	0.5	50	50	ENSMUST00000221368.2	ENSMUSG00000021254.10	Gpatch2l	chr12	protein_coding	G patch domain containing 2 like
chr12	86308469	86309004	+	86308469	86311956	A3SS	0.5	50	50	ENSMUST00000221368.2	ENSMUSG00000021254.10	Gpatch2l	chr12	protein_coding	G patch domain containing 2 like
chr12	86553284	86556436	+	86553284	86561055	A3SS	0.5	50	50	ENSMUST00000116402.10	ENSMUSG00000021255.18	Esrrb	chr12	protein_coding	estrogen related receptor, beta
chr12	86468738	86516920	+	86408312	86516920	A5SS	0.33	50	50	ENSMUST00000116402.10	ENSMUSG00000021255.18	Esrrb	chr12	protein_coding	estrogen related receptor, beta
chr12	86468742	86516920	+	86408312	86516920	A5SS	0.33	50	50	ENSMUST00000116402.10	ENSMUSG00000021255.18	Esrrb	chr12	protein_coding	estrogen related receptor, beta
chr12	86551297	86552589	+	86535437	86552589	A5SS	0.5	50	50	ENSMUST00000116402.10	ENSMUSG00000021255.18	Esrrb	chr12	protein_coding	estrogen related receptor, beta
chr12	86468742	86516920	+	86468738	86516920	A5SS	0.33	50	50	ENSMUST00000110203.8	ENSMUSG00000021255.18	Esrrb	chr12	protein_coding	estrogen related receptor, beta
chr12	86765134	86767004	-	86764615	86767004	A3SS	0.5	50	50	ENSMUST00000021682.9	ENSMUSG00000021257.15	Angel1	chr12	protein_coding	angel homolog 1
chr12	86752110	86752629	-	86752110	86763690	A5SS	0.25	50	50	ENSMUST00000021682.9	ENSMUSG00000021257.15	Angel1	chr12	protein_coding	angel homolog 1
chr12	86752110	86752874	-	86752110	86763690	A5SS	0.25	50	50	ENSMUST00000021682.9	ENSMUSG00000021257.15	Angel1	chr12	protein_coding	angel homolog 1
chr12	86752110	86763344	-	86752110	86763690	A5SS	0.25	50	50	ENSMUST00000021682.9	ENSMUSG00000021257.15	Angel1	chr12	protein_coding	angel homolog 1
chr12	86752110	86763344	-	86752110	86752874	5pMXE	0.25	50	50	ENSMUST00000167813.8	ENSMUSG00000021257.15	Angel1	chr12	protein_coding	angel homolog 1
chr12	86752110	86752629	-	86752110	86752874	A5SS	0.25	50	50	ENSMUST00000167813.8	ENSMUSG00000021257.15	Angel1	chr12	protein_coding	angel homolog 1
chr12	86752110	86752629	-	86752110	86763344	A5SS	0.25	50	50	ENSMUST00000165332.8	ENSMUSG00000021257.15	Angel1	chr12	protein_coding	angel homolog 1
chr12	86809418;86809681	86809588;86810401	+	86809418	86810401	cassetteExon	0.5	100	100	ENSMUST00000223308.2	ENSMUSG00000059114.9	Lrrc74a	chr12	protein_coding	leucine rich repeat containing 74A
chr12	86787823	86788407	+	86787823	86788475	A3SS	0.5	50	50	ENSMUST00000223308.2	ENSMUSG00000059114.9	Lrrc74a	chr12	protein_coding	leucine rich repeat containing 74A
chr12	86795240	86795906	+	86795240	86795797	A3SS	0.5	50	50	ENSMUST00000223308.2	ENSMUSG00000059114.9	Lrrc74a	chr12	protein_coding	leucine rich repeat containing 74A
chr12	86784574	86787716	+	86784618	86787716	A5SS	0.5	50	50	ENSMUST00000223308.2	ENSMUSG00000059114.9	Lrrc74a	chr12	protein_coding	leucine rich repeat containing 74A
chr12	86809418	86810401	+	86809418	86809588	A3SS&ES	0.5	50	50	ENSMUST00000095527.6	ENSMUSG00000059114.9	Lrrc74a	chr12	protein_coding	leucine rich repeat containing 74A
chr12	86809681	86810401	+	86809681	86810398	A3SS	0.5	50	50	ENSMUST00000095527.6	ENSMUSG00000059114.9	Lrrc74a	chr12	protein_coding	leucine rich repeat containing 74A
chr12	86999705;87006602	87006502;87007046	+	86999705	87007046	cassetteExon	0.5	100	100	ENSMUST00000189246.7	ENSMUSG00000034157.13	Cipc	chr12	protein_coding	CLOCK interacting protein, circadian
chr12	86994273	86999518	+	86994024	86999518	A5SS	0.33	50	50	ENSMUST00000189246.7	ENSMUSG00000034157.13	Cipc	chr12	protein_coding	CLOCK interacting protein, circadian
chr12	86994877	86999518	+	86994024	86999518	A5SS	0.33	50	50	ENSMUST00000189246.7	ENSMUSG00000034157.13	Cipc	chr12	protein_coding	CLOCK interacting protein, circadian
chr12	86999778	87007046	+	86999705	87007046	A5SS	0.33	50	50	ENSMUST00000189246.7	ENSMUSG00000034157.13	Cipc	chr12	protein_coding	CLOCK interacting protein, circadian
chr12	86999778	87006502	+	86999705	87006502	A5SS	0.5	50	50	ENSMUST00000185434.7	ENSMUSG00000034157.13	Cipc	chr12	protein_coding	CLOCK interacting protein, circadian
chr12	86999778	87007046	+	87006602	87007046	A5SS&ES	0.33	50	50	ENSMUST00000185434.7	ENSMUSG00000034157.13	Cipc	chr12	protein_coding	CLOCK interacting protein, circadian
chr12	86999778	87007046	+	86999778;87006602	87006502;87007046	ES	0.33	50	50	ENSMUST00000191032.7	ENSMUSG00000034157.13	Cipc	chr12	protein_coding	CLOCK interacting protein, circadian
chr12	86999705	87007046	+	87006602	87007046	A5SS&ES	0.33	50	50	ENSMUST00000191032.7	ENSMUSG00000034157.13	Cipc	chr12	protein_coding	CLOCK interacting protein, circadian
chr12	86994273;86994877	86994743;86999518	+	86994273	86999518	cassetteExon	0.5	100	100	ENSMUST00000187814.7	ENSMUSG00000034157.13	Cipc	chr12	protein_coding	CLOCK interacting protein, circadian
chr12	87099662	87103162	+	87099662;87102259	87102219;87103162	ES	0.5	50	50	ENSMUST00000154801.8	ENSMUSG00000034145.15	Tmem63c	chr12	protein_coding	transmembrane protein 63c
chr12	87133200	87136000	+	87133200;87133628	87133373;87136000	ES	0.5	50	50	ENSMUST00000154801.8	ENSMUSG00000034145.15	Tmem63c	chr12	protein_coding	transmembrane protein 63c
chr12	87073364	87099600	+	87068234	87099600	A5SS	0.25	50	50	ENSMUST00000154801.8	ENSMUSG00000034145.15	Tmem63c	chr12	protein_coding	transmembrane protein 63c
chr12	87073444	87099600	+	87068234	87099600	A5SS	0.25	50	50	ENSMUST00000154801.8	ENSMUSG00000034145.15	Tmem63c	chr12	protein_coding	transmembrane protein 63c
chr12	87085364	87099600	+	87068234	87099600	A5SS	0.25	50	50	ENSMUST00000154801.8	ENSMUSG00000034145.15	Tmem63c	chr12	protein_coding	transmembrane protein 63c
chr12	87113718	87115897	+	87113722	87115897	A5SS	0.5	50	50	ENSMUST00000154801.8	ENSMUSG00000034145.15	Tmem63c	chr12	protein_coding	transmembrane protein 63c
chr12	87073364;87085364	87085216;87099600	+	87073364	87099600	cassetteExon	0.5	100	100	ENSMUST00000146292.8	ENSMUSG00000034145.15	Tmem63c	chr12	protein_coding	transmembrane protein 63c
chr12	87073444	87099600	+	87073364	87099600	A5SS	0.25	50	50	ENSMUST00000146292.8	ENSMUSG00000034145.15	Tmem63c	chr12	protein_coding	transmembrane protein 63c
chr12	87073444	87099600	+	87085364	87099600	A5SS&ES	0.33	50	50	ENSMUST00000110187.8	ENSMUSG00000034145.15	Tmem63c	chr12	protein_coding	transmembrane protein 63c
chr12	87073364	87099600	+	87085364	87099600	5pMXE	0.25	50	50	ENSMUST00000131878.2	ENSMUSG00000034145.15	Tmem63c	chr12	protein_coding	transmembrane protein 63c
chr12	87145320;87147014	87146920;87147463	-	87145320;87146889	87146758;87147463	MXE	0.5	100	100	ENSMUST00000110177.9	ENSMUSG00000021032.14	Ngb	chr12	protein_coding	neuroglobin
chr12	87145320	87146770	-	87145320	87146758	A5SS	0.33	50	50	ENSMUST00000110177.9	ENSMUSG00000021032.14	Ngb	chr12	protein_coding	neuroglobin
chr12	87145320;87147014	87146920;87147463	-	87145320;87146889	87146770;87147463	MXE	0.5	100	100	ENSMUST00000021420.14	ENSMUSG00000021032.14	Ngb	chr12	protein_coding	neuroglobin
chr12	87204718	87206414	+	87204718;87205919	87205852;87206414	ES	0.5	50	50	ENSMUST00000222885.2	ENSMUSG00000021033.12	Gstz1	chr12	protein_coding	glutathione transferase zeta 1 (maleylacetoacetate isomerase)
chr12	87194618	87204667	+	87202343	87204667	A5SS&ES	0.33	50	50	ENSMUST00000222885.2	ENSMUSG00000021033.12	Gstz1	chr12	protein_coding	glutathione transferase zeta 1 (maleylacetoacetate isomerase)
chr12	87204434	87204667	+	87202343	87204667	A5SS	0.33	50	50	ENSMUST00000222885.2	ENSMUSG00000021033.12	Gstz1	chr12	protein_coding	glutathione transferase zeta 1 (maleylacetoacetate isomerase)
chr12	87204434	87204667	+	87194618	87204667	A5SS	0.33	50	50	ENSMUST00000063117.10	ENSMUSG00000021033.12	Gstz1	chr12	protein_coding	glutathione transferase zeta 1 (maleylacetoacetate isomerase)
chr12	87249910;87254843	87254683;87255474	+	87249910	87255474	cassetteExon	0.5	100	100	ENSMUST00000183251.8	ENSMUSG00000090812.9	Samd15	chr12	protein_coding	sterile alpha motif domain containing 15
chr12	87248810	87249812	+	87246570	87249812	A5SS	0.5	50	50	ENSMUST00000183251.8	ENSMUSG00000090812.9	Samd15	chr12	protein_coding	sterile alpha motif domain containing 15
chr12	87280353	87283707	-	87280353	87284082	A5SS	0.5	50	50	ENSMUST00000222480.2	ENSMUSG00000072919.5	Noxred1	chr12	protein_coding	NADP+ dependent oxidoreductase domain containing 1
chr12	87300032	87303259	-	87300032;87301060	87301004;87303259	ES	0.5	50	50	ENSMUST00000072744.15	ENSMUSG00000021038.18	Vipas39	chr12	protein_coding	VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog
chr12	87310771	87310870	-	87310771	87312926	A5SS	0.5	50	50	ENSMUST00000072744.15	ENSMUSG00000021038.18	Vipas39	chr12	protein_coding	VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog
chr12	87313695	87314929	+	87313432	87314929	A5SS	0.5	50	50	ENSMUST00000223352.2	ENSMUSG00000021037.8	Ahsa1	chr12	protein_coding	AHA1, activator of heat shock protein ATPase 1
chr12	87329267	87329420	-	87329157	87329420	A3SS	0.5	50	50	ENSMUST00000125733.8	ENSMUSG00000050671.13	Ism2	chr12	protein_coding	isthmin 2
chr12	87393575	87402300	-	87393575;87397159	87397035;87402300	ES	0.5	50	50	ENSMUST00000021424.5	ENSMUSG00000021036.11	Sptlc2	chr12	protein_coding	serine palmitoyltransferase, long chain base subunit 2
chr12	87360960	87375332	-	87360960	87382806	A5SS	0.5	50	50	ENSMUST00000021424.5	ENSMUSG00000021036.11	Sptlc2	chr12	protein_coding	serine palmitoyltransferase, long chain base subunit 2
chr12	87393575	87402300	-	87393575	87397035	5pMXE	0.5	50	50	ENSMUST00000170110.2	ENSMUSG00000021036.11	Sptlc2	chr12	protein_coding	serine palmitoyltransferase, long chain base subunit 2
chr12	87480979	87487076	-	87480979;87485329	87485167;87487076	ES	0.5	50	50	ENSMUST00000162961.8	ENSMUSG00000079036.11	Alkbh1	chr12	protein_coding	alkB homolog 1, histone H2A dioxygenase
chr12	87485329	87490412	-	87485329;87487184	87487076;87490412	ES	0.33	50	50	ENSMUST00000162961.8	ENSMUSG00000079036.11	Alkbh1	chr12	protein_coding	alkB homolog 1, histone H2A dioxygenase
chr12	87487184;87488550	87488413;87490412	-	87487184	87490412	cassetteExon	0.5	100	100	ENSMUST00000162961.8	ENSMUSG00000079036.11	Alkbh1	chr12	protein_coding	alkB homolog 1, histone H2A dioxygenase
chr12	87478306	87480889	-	87478363	87480889	A3SS	0.33	50	50	ENSMUST00000162961.8	ENSMUSG00000079036.11	Alkbh1	chr12	protein_coding	alkB homolog 1, histone H2A dioxygenase
chr12	87478308	87480889	-	87478363	87480889	A3SS	0.33	50	50	ENSMUST00000162961.8	ENSMUSG00000079036.11	Alkbh1	chr12	protein_coding	alkB homolog 1, histone H2A dioxygenase
chr12	87487184	87488041	-	87487184	87490412	A5SS	0.33	50	50	ENSMUST00000162961.8	ENSMUSG00000079036.11	Alkbh1	chr12	protein_coding	alkB homolog 1, histone H2A dioxygenase
chr12	87487184;87488113	87488041;87488413	-	87487184	87488413	cassetteExon	0.5	100	100	ENSMUST00000160113.8	ENSMUSG00000079036.11	Alkbh1	chr12	protein_coding	alkB homolog 1, histone H2A dioxygenase
chr12	87478306	87480889	-	87478308	87480889	A3SS	0.33	50	50	ENSMUST00000160113.8	ENSMUSG00000079036.11	Alkbh1	chr12	protein_coding	alkB homolog 1, histone H2A dioxygenase
chr12	87480979;87485329	87485167;87490412	-	87480979;87487184	87487076;87490412	MXE	0.5	100	100	ENSMUST00000159079.2	ENSMUSG00000079036.11	Alkbh1	chr12	protein_coding	alkB homolog 1, histone H2A dioxygenase
chr12	87480979	87487076	-	87480979	87485167	5pMXE	0.5	50	50	ENSMUST00000160687.2	ENSMUSG00000079036.11	Alkbh1	chr12	protein_coding	alkB homolog 1, histone H2A dioxygenase
chr12	87487184	87490412	-	87487184	87488413	5pMXE	0.33	50	50	ENSMUST00000160919.8	ENSMUSG00000079036.11	Alkbh1	chr12	protein_coding	alkB homolog 1, histone H2A dioxygenase
chr12	87488550	87490412	-	87485329	87490412	A3SS	0.33	50	50	ENSMUST00000162986.2	ENSMUSG00000079036.11	Alkbh1	chr12	protein_coding	alkB homolog 1, histone H2A dioxygenase
chr12	87494392	87496070	+	87494392	87496063	A3SS	0.5	50	50	ENSMUST00000161023.8	ENSMUSG00000021040.16	Slirp	chr12	protein_coding	SRA stem-loop interacting RNA binding protein
chr12	87494368	87496063	+	87494392	87496063	A5SS	0.5	50	50	ENSMUST00000161023.8	ENSMUSG00000021040.16	Slirp	chr12	protein_coding	SRA stem-loop interacting RNA binding protein
chr12	87649537	87653561	+	87649537;87653046	87652736;87653561	ES	0.5	50	50	ENSMUST00000222112.2	ENSMUSG00000096576.3	Oog1	chr12	protein_coding	oogenesin 1
chr12	87924881	87925395	+	87924881	87925398	A3SS	0.5	50	50	ENSMUST00000180803.8	ENSMUSG00000096276.10	Gm2042	chr12	protein_coding	predicted gene 2042
chr12	87921352	87924571	+	87920949	87924571	A5SS	0.25	50	50	ENSMUST00000180803.8	ENSMUSG00000096276.10	Gm2042	chr12	protein_coding	predicted gene 2042
chr12	87922355	87924571	+	87920949	87924571	A5SS	0.25	50	50	ENSMUST00000180803.8	ENSMUSG00000096276.10	Gm2042	chr12	protein_coding	predicted gene 2042
chr12	87923383	87924571	+	87920949	87924571	A5SS	0.25	50	50	ENSMUST00000180803.8	ENSMUSG00000096276.10	Gm2042	chr12	protein_coding	predicted gene 2042
chr12	87921352;87924881	87924571;87925395	+	87921352	87925395	cassetteExon	0.5	100	100	ENSMUST00000181347.2	ENSMUSG00000096276.10	Gm2042	chr12	protein_coding	predicted gene 2042
chr12	87921352	87922173	+	87921352	87925395	A3SS	0.25	50	50	ENSMUST00000181347.2	ENSMUSG00000096276.10	Gm2042	chr12	protein_coding	predicted gene 2042
chr12	87921352	87923333	+	87921352	87925395	A3SS	0.25	50	50	ENSMUST00000181347.2	ENSMUSG00000096276.10	Gm2042	chr12	protein_coding	predicted gene 2042
chr12	87921352;87922355	87922173;87924571	+	87921352	87924571	cassetteExon	0.5	100	100	ENSMUST00000110145.12	ENSMUSG00000096276.10	Gm2042	chr12	protein_coding	predicted gene 2042
chr12	87921352;87923383	87923333;87924571	+	87921352	87924571	cassetteExon	0.5	100	100	ENSMUST00000110145.12	ENSMUSG00000096276.10	Gm2042	chr12	protein_coding	predicted gene 2042
chr12	87925542	87926602	+	87925970	87926602	A5SS	0.5	50	50	ENSMUST00000110145.12	ENSMUSG00000096276.10	Gm2042	chr12	protein_coding	predicted gene 2042
chr12	87921352;87923383	87923333;87924571	+	87921352;87922355	87922173;87924571	MXE	0.5	100	100	ENSMUST00000181843.2	ENSMUSG00000096276.10	Gm2042	chr12	protein_coding	predicted gene 2042
chr12	87921352	87925395	+	87921352	87924571	A3SS&ES	0.25	50	50	ENSMUST00000181394.8	ENSMUSG00000096276.10	Gm2042	chr12	protein_coding	predicted gene 2042
chr12	88144419	88148510	-	88144419;88145243	88144933;88148510	ES	0.25	50	50	ENSMUST00000222081.2	ENSMUSG00000066027.8	Pramel51	chr12	protein_coding	PRAME like 51
chr12	88145243;88146482	88146432;88148510	-	88145243	88148510	cassetteExon	0.5	100	100	ENSMUST00000222081.2	ENSMUSG00000066027.8	Pramel51	chr12	protein_coding	PRAME like 51
chr12	88144419;88147714	88147532;88148510	-	88144419;88145243	88144933;88148510	MXE	0.5	100	100	ENSMUST00000222081.2	ENSMUSG00000066027.8	Pramel51	chr12	protein_coding	PRAME like 51
chr12	88145243;88147714	88147532;88148510	-	88145243	88148510	cassetteExon	0.5	100	100	ENSMUST00000222081.2	ENSMUSG00000066027.8	Pramel51	chr12	protein_coding	PRAME like 51
chr12	88143209	88143844	-	88143209	88144272	A5SS	0.5	50	50	ENSMUST00000222556.2	ENSMUSG00000066027.8	Pramel51	chr12	protein_coding	PRAME like 51
chr12	88144419;88147714	88147532;88148510	-	88144419	88148510	cassetteExon	0.5	100	100	ENSMUST00000220521.2	ENSMUSG00000066027.8	Pramel51	chr12	protein_coding	PRAME like 51
chr12	88146482	88148510	-	88144419	88148510	A3SS	0.25	50	50	ENSMUST00000220521.2	ENSMUSG00000066027.8	Pramel51	chr12	protein_coding	PRAME like 51
chr12	88144419;88145243	88144933;88147532	-	88144419	88147532	cassetteExon	0.5	100	100	ENSMUST00000222391.2	ENSMUSG00000066027.8	Pramel51	chr12	protein_coding	PRAME like 51
chr12	88146482	88148510	-	88147714	88148510	A3SS&ES	0.25	50	50	ENSMUST00000222391.2	ENSMUSG00000066027.8	Pramel51	chr12	protein_coding	PRAME like 51
chr12	88144419;88147714	88147532;88148510	-	88144419;88146482	88144933;88148510	MXE	0.5	100	100	ENSMUST00000221884.2	ENSMUSG00000066027.8	Pramel51	chr12	protein_coding	PRAME like 51
chr12	88145243;88147714	88147532;88148510	-	88145243;88146482	88146432;88148510	MXE	0.5	100	100	ENSMUST00000221884.2	ENSMUSG00000066027.8	Pramel51	chr12	protein_coding	PRAME like 51
chr12	88327553	88335105	+	88327365	88335105	A5SS	0.33	50	50	ENSMUST00000101165.9	ENSMUSG00000021044.16	Adck1	chr12	protein_coding	aarF domain containing kinase 1
chr12	88327742	88335105	+	88327365	88335105	A5SS	0.33	50	50	ENSMUST00000101165.9	ENSMUSG00000021044.16	Adck1	chr12	protein_coding	aarF domain containing kinase 1
chr12	88387247	88397791	+	88368946	88397791	A5SS	0.5	50	50	ENSMUST00000101165.9	ENSMUSG00000021044.16	Adck1	chr12	protein_coding	aarF domain containing kinase 1
chr12	88327742	88335105	+	88327553	88335105	A5SS	0.33	50	50	ENSMUST00000222695.2	ENSMUSG00000021044.16	Adck1	chr12	protein_coding	aarF domain containing kinase 1
chr12	88407948	88408951	-	88408005	88408951	A3SS	0.5	50	50	ENSMUST00000222124.2	ENSMUSG00000113087.2	4930473H19Rik	chr12	lncRNA	RIKEN cDNA 4930473H19 gene
chr12	88691839	88761274	+	88689956	88761274	A5SS	0.33	50	50	ENSMUST00000167734.8	ENSMUSG00000066392.13	Nrxn3	chr12	protein_coding	neurexin III
chr12	88692500	88761274	+	88689956	88761274	A5SS	0.33	50	50	ENSMUST00000167734.8	ENSMUSG00000066392.13	Nrxn3	chr12	protein_coding	neurexin III
chr12	88920386	89153792	+	88817078	89153792	A5SS	0.25	50	50	ENSMUST00000167734.8	ENSMUSG00000066392.13	Nrxn3	chr12	protein_coding	neurexin III
chr12	88921681	89153792	+	88817078	89153792	A5SS	0.25	50	50	ENSMUST00000167734.8	ENSMUSG00000066392.13	Nrxn3	chr12	protein_coding	neurexin III
chr12	89315219	89469788	+	89315219;89321249	89321223;89469788	ES	0.5	50	50	ENSMUST00000190626.7	ENSMUSG00000066392.13	Nrxn3	chr12	protein_coding	neurexin III
chr12	89479882	89499661	+	89479882;89484702	89484676;89499661	ES	0.5	50	50	ENSMUST00000190626.7	ENSMUSG00000066392.13	Nrxn3	chr12	protein_coding	neurexin III
chr12	90135865;90166010	90165921;90171285	+	90135865	90171285	cassetteExon	0.5	100	100	ENSMUST00000190626.7	ENSMUSG00000066392.13	Nrxn3	chr12	protein_coding	neurexin III
chr12	88689956	88761274	+	88689956	89153792	A3SS	0.5	50	50	ENSMUST00000190626.7	ENSMUSG00000066392.13	Nrxn3	chr12	protein_coding	neurexin III
chr12	90250433	90298562	+	90250433	90288710	A3SS&ES	0.33	50	50	ENSMUST00000190626.7	ENSMUSG00000066392.13	Nrxn3	chr12	protein_coding	neurexin III
chr12	90250433	90298883	+	90250433	90288710	A3SS&ES	0.33	50	50	ENSMUST00000190626.7	ENSMUSG00000066392.13	Nrxn3	chr12	protein_coding	neurexin III
chr12	88817078	89153792	+	88689956	89153792	A5SS	0.25	50	50	ENSMUST00000190626.7	ENSMUSG00000066392.13	Nrxn3	chr12	protein_coding	neurexin III
chr12	88920386	89153792	+	88689956	89153792	A5SS	0.25	50	50	ENSMUST00000190626.7	ENSMUSG00000066392.13	Nrxn3	chr12	protein_coding	neurexin III
chr12	88921681	89153792	+	88689956	89153792	A5SS	0.25	50	50	ENSMUST00000190626.7	ENSMUSG00000066392.13	Nrxn3	chr12	protein_coding	neurexin III
chr12	89780410	89943115	+	89499780	89943115	A5SS	0.5	50	50	ENSMUST00000190626.7	ENSMUSG00000066392.13	Nrxn3	chr12	protein_coding	neurexin III
chr12	90250424	90288710	+	90250433	90288710	A5SS	0.5	50	50	ENSMUST00000190626.7	ENSMUSG00000066392.13	Nrxn3	chr12	protein_coding	neurexin III
chr12	90250424	90298259	+	90289415	90298259	A5SS&ES	0.5	50	50	ENSMUST00000190626.7	ENSMUSG00000066392.13	Nrxn3	chr12	protein_coding	neurexin III
chr12	90250424	90298259	+	90250424;90289415	90288710;90298259	ES	0.5	50	50	ENSMUST00000167103.8	ENSMUSG00000066392.13	Nrxn3	chr12	protein_coding	neurexin III
chr12	90250424	90298562	+	90250424	90288710	A3SS&ES	0.25	50	50	ENSMUST00000167103.8	ENSMUSG00000066392.13	Nrxn3	chr12	protein_coding	neurexin III
chr12	90250424	90298883	+	90250424	90288710	A3SS&ES	0.25	50	50	ENSMUST00000167103.8	ENSMUSG00000066392.13	Nrxn3	chr12	protein_coding	neurexin III
chr12	88692500	88761274	+	88691839	88761274	A5SS	0.33	50	50	ENSMUST00000163944.2	ENSMUSG00000066392.13	Nrxn3	chr12	protein_coding	neurexin III
chr12	90250424	90298259	+	90250424	90298562	A3SS	0.25	50	50	ENSMUST00000163134.8	ENSMUSG00000066392.13	Nrxn3	chr12	protein_coding	neurexin III
chr12	90250424	90298883	+	90250424	90298562	A3SS	0.25	50	50	ENSMUST00000163134.8	ENSMUSG00000066392.13	Nrxn3	chr12	protein_coding	neurexin III
chr12	90250433	90298562	+	90250424	90298562	A5SS	0.5	50	50	ENSMUST00000163134.8	ENSMUSG00000066392.13	Nrxn3	chr12	protein_coding	neurexin III
chr12	88920386;88921681	88921581;89153792	+	88920386	89153792	cassetteExon	0.5	100	100	ENSMUST00000170533.2	ENSMUSG00000066392.13	Nrxn3	chr12	protein_coding	neurexin III
chr12	90250424	90298259	+	90250424	90298883	A3SS	0.25	50	50	ENSMUST00000057634.14	ENSMUSG00000066392.13	Nrxn3	chr12	protein_coding	neurexin III
chr12	90250433	90298883	+	90250424	90298883	A5SS	0.5	50	50	ENSMUST00000057634.14	ENSMUSG00000066392.13	Nrxn3	chr12	protein_coding	neurexin III
chr12	90250424	90288710	+	90250424	90298259	A3SS	0.25	50	50	ENSMUST00000238943.2	ENSMUSG00000066392.13	Nrxn3	chr12	protein_coding	neurexin III
chr12	90250433	90298562	+	90250433	90298883	A3SS	0.33	50	50	ENSMUST00000110133.9	ENSMUSG00000066392.13	Nrxn3	chr12	protein_coding	neurexin III
chr12	90712035	90757919	+	90712035	90714795	3pMXE	0.33	50	50	ENSMUST00000181874.2	ENSMUSG00000097157.3	Gm26512	chr12	lncRNA	predicted gene, 26512
chr12	90712035	90713965	+	90712035	90714795	A3SS	0.33	50	50	ENSMUST00000181874.2	ENSMUSG00000097157.3	Gm26512	chr12	lncRNA	predicted gene, 26512
chr12	90712035	90713965	+	90712035	90757919	A3SS	0.33	50	50	ENSMUST00000221942.2	ENSMUSG00000097157.3	Gm26512	chr12	lncRNA	predicted gene, 26512
chr12	90923421	90936364	-	90892253	90936364	A3SS	0.5	50	50	ENSMUST00000181184.2	ENSMUSG00000097071.3	4930544I03Rik	chr12	lncRNA	RIKEN cDNA 4930544I03 gene
chr12	90975709	90986066	-	90975709;90976400	90976337;90986066	ES	0.5	50	50	ENSMUST00000143415.8	ENSMUSG00000061533.17	Cep128	chr12	protein_coding	centrosomal protein 128
chr12	91200994	91226760	-	91200994;91222513	91222349;91226760	ES	0.5	50	50	ENSMUST00000143415.8	ENSMUSG00000061533.17	Cep128	chr12	protein_coding	centrosomal protein 128
chr12	90989251	90996819	-	90989251	91029916	A5SS	0.5	50	50	ENSMUST00000143415.8	ENSMUSG00000061533.17	Cep128	chr12	protein_coding	centrosomal protein 128
chr12	91029939	91030050	-	91029939	91050448	A5SS	0.5	50	50	ENSMUST00000143415.8	ENSMUSG00000061533.17	Cep128	chr12	protein_coding	centrosomal protein 128
chr12	91050497	91125840	-	91050497	91180339	A5SS	0.33	50	50	ENSMUST00000143415.8	ENSMUSG00000061533.17	Cep128	chr12	protein_coding	centrosomal protein 128
chr12	91050497	91150438	-	91050497	91180339	A5SS	0.33	50	50	ENSMUST00000143415.8	ENSMUSG00000061533.17	Cep128	chr12	protein_coding	centrosomal protein 128
chr12	91286768	91292289	-	91265851	91292289	A3SS	0.5	50	50	ENSMUST00000141429.8	ENSMUSG00000061533.17	Cep128	chr12	protein_coding	centrosomal protein 128
chr12	91310402	91314300	-	91305924	91314300	A3SS	0.5	50	50	ENSMUST00000141429.8	ENSMUSG00000061533.17	Cep128	chr12	protein_coding	centrosomal protein 128
chr12	91333278	91336855	-	91333278	91336836	A5SS	0.5	50	50	ENSMUST00000141429.8	ENSMUSG00000061533.17	Cep128	chr12	protein_coding	centrosomal protein 128
chr12	91050497;91125914	91125840;91150438	-	91050497	91150438	cassetteExon	0.5	100	100	ENSMUST00000123161.8	ENSMUSG00000061533.17	Cep128	chr12	protein_coding	centrosomal protein 128
chr12	91017241	91019665	+	91017241	91046562	A3SS	0.5	50	50	ENSMUST00000129932.2	ENSMUSG00000085004.3	5430427M07Rik	chr12	lncRNA	RIKEN cDNA 5430427M07 gene
chr12	91351672	91354056	+	91351672	91352614	3pMXE	0.5	50	50	ENSMUST00000222686.2	ENSMUSG00000020963.16	Tshr	chr12	protein_coding	thyroid stimulating hormone receptor
chr12	91486119	91488754	+	91486119	91500663	A3SS	0.5	50	50	ENSMUST00000221216.2	ENSMUSG00000020963.16	Tshr	chr12	protein_coding	thyroid stimulating hormone receptor
chr12	91500851	91503945	+	91500851	91516089	A3SS	0.5	50	50	ENSMUST00000221216.2	ENSMUSG00000020963.16	Tshr	chr12	protein_coding	thyroid stimulating hormone receptor
chr12	91368028	91460078	+	91354155	91460078	A5SS	0.5	50	50	ENSMUST00000221216.2	ENSMUSG00000020963.16	Tshr	chr12	protein_coding	thyroid stimulating hormone receptor
chr12	91553575	91557160	-	91553575	91556309	5pMXE	0.5	50	50	ENSMUST00000021345.14	ENSMUSG00000020962.15	Gtf2a1	chr12	protein_coding	general transcription factor II A, 1
chr12	91670570	91680701	-	91615844	91680701	A3SS	0.5	50	50	ENSMUST00000052969.15	ENSMUSG00000020961.16	Ston2	chr12	protein_coding	stonin 2
chr12	91702242	91707245	-	91680898	91707245	A3SS	0.5	50	50	ENSMUST00000052969.15	ENSMUSG00000020961.16	Ston2	chr12	protein_coding	stonin 2
chr12	91710652	91712757	-	91710652	91752901	A5SS	0.25	50	50	ENSMUST00000052969.15	ENSMUSG00000020961.16	Ston2	chr12	protein_coding	stonin 2
chr12	91710652	91737365	-	91710652	91752901	A5SS	0.25	50	50	ENSMUST00000052969.15	ENSMUSG00000020961.16	Ston2	chr12	protein_coding	stonin 2
chr12	91710652	91745773	-	91710652	91752901	A5SS	0.25	50	50	ENSMUST00000052969.15	ENSMUSG00000020961.16	Ston2	chr12	protein_coding	stonin 2
chr12	91710652	91712757	-	91710652	91745773	A5SS	0.25	50	50	ENSMUST00000170077.2	ENSMUSG00000020961.16	Ston2	chr12	protein_coding	stonin 2
chr12	91710652	91737365	-	91710652	91745773	A5SS	0.25	50	50	ENSMUST00000170077.2	ENSMUSG00000020961.16	Ston2	chr12	protein_coding	stonin 2
chr12	91710652	91712757	-	91710652	91737365	A5SS	0.25	50	50	ENSMUST00000170984.2	ENSMUSG00000020961.16	Ston2	chr12	protein_coding	stonin 2
chr12	91650319	91652729	-	91641988	91652729	A3SS	0.33	50	50	ENSMUST00000165070.2	ENSMUSG00000090722.9	Gm8378	chr12	lncRNA	predicted gene 8378
chr12	91651816	91652729	-	91641988	91652729	A3SS	0.33	50	50	ENSMUST00000165070.2	ENSMUSG00000090722.9	Gm8378	chr12	lncRNA	predicted gene 8378
chr12	91651816	91652729	-	91650319	91652729	A3SS	0.33	50	50	ENSMUST00000172047.8	ENSMUSG00000090722.9	Gm8378	chr12	lncRNA	predicted gene 8378
chr12	91798448;91798558	91798541;91808412	-	91798448;91799996	91799829;91808412	MXE	0.5	100	100	ENSMUST00000021347.12	ENSMUSG00000020964.15	Sel1l	chr12	protein_coding	sel-1 suppressor of lin-12-like (C. elegans)
chr12	91798448	91799979	-	91798448	91799829	A5SS	0.33	50	50	ENSMUST00000021347.12	ENSMUSG00000020964.15	Sel1l	chr12	protein_coding	sel-1 suppressor of lin-12-like (C. elegans)
chr12	91798448;91799996	91799979;91808412	-	91798448;91798558	91798541;91808412	MXE	0.5	100	100	ENSMUST00000178462.8	ENSMUSG00000020964.15	Sel1l	chr12	protein_coding	sel-1 suppressor of lin-12-like (C. elegans)
chr12	91798558	91808412	-	91799996	91808412	3pMXE	0.5	50	50	ENSMUST00000172246.8	ENSMUSG00000020964.15	Sel1l	chr12	protein_coding	sel-1 suppressor of lin-12-like (C. elegans)
chr12	95662752	95745281	+	95659389	95745281	A5SS	0.5	50	50	ENSMUST00000057324.4	ENSMUSG00000047414.7	Flrt2	chr12	protein_coding	fibronectin leucine rich transmembrane protein 2
chr12	98060972	98074529	-	98050244	98074529	A3SS	0.5	50	50	ENSMUST00000219545.2	ENSMUSG00000112812.2	Gm47415	chr12	lncRNA	predicted gene, 47415
chr12	98186686	98188859	-	98182596	98188859	A3SS	0.5	50	50	ENSMUST00000021390.9	ENSMUSG00000021003.11	Galc	chr12	protein_coding	galactosylceramidase
chr12	98182596	98182701	-	98182596	98188859	A5SS	0.5	50	50	ENSMUST00000021390.9	ENSMUSG00000021003.11	Galc	chr12	protein_coding	galactosylceramidase
chr12	98209031	98209685	-	98209031	98212513	A5SS	0.5	50	50	ENSMUST00000021390.9	ENSMUSG00000021003.11	Galc	chr12	protein_coding	galactosylceramidase
chr12	98223199	98224233	-	98223199	98225394	A5SS	0.5	50	50	ENSMUST00000021390.9	ENSMUSG00000021003.11	Galc	chr12	protein_coding	galactosylceramidase
chr12	98423164	98456164	-	98407037	98456164	A3SS	0.5	50	50	ENSMUST00000221240.2	ENSMUSG00000033854.11	Kcnk10	chr12	protein_coding	potassium channel, subfamily K, member 10
chr12	98485091	98495439	-	98485091	98544045	A5SS	0.25	50	50	ENSMUST00000221240.2	ENSMUSG00000033854.11	Kcnk10	chr12	protein_coding	potassium channel, subfamily K, member 10
chr12	98485091	98540416	-	98485091	98544045	A5SS	0.25	50	50	ENSMUST00000221240.2	ENSMUSG00000033854.11	Kcnk10	chr12	protein_coding	potassium channel, subfamily K, member 10
chr12	98485091	98541300	-	98485091	98544045	A5SS	0.25	50	50	ENSMUST00000221240.2	ENSMUSG00000033854.11	Kcnk10	chr12	protein_coding	potassium channel, subfamily K, member 10
chr12	98485091	98495439	-	98485091	98541300	A5SS	0.25	50	50	ENSMUST00000110113.3	ENSMUSG00000033854.11	Kcnk10	chr12	protein_coding	potassium channel, subfamily K, member 10
chr12	98485091	98540416	-	98485091	98541300	A5SS	0.25	50	50	ENSMUST00000110113.3	ENSMUSG00000033854.11	Kcnk10	chr12	protein_coding	potassium channel, subfamily K, member 10
chr12	98485091	98495439	-	98485091	98540416	A5SS	0.25	50	50	ENSMUST00000221305.2	ENSMUSG00000033854.11	Kcnk10	chr12	protein_coding	potassium channel, subfamily K, member 10
chr12	98598296	98603825	+	98598296;98600578	98600483;98603825	ES	0.5	50	50	ENSMUST00000048402.12	ENSMUSG00000021007.15	Spata7	chr12	protein_coding	spermatogenesis associated 7
chr12	98614741	98624472	+	98614741	98628231	A3SS	0.5	50	50	ENSMUST00000101144.10	ENSMUSG00000021007.15	Spata7	chr12	protein_coding	spermatogenesis associated 7
chr12	98625875	98628231	+	98614741	98628231	A5SS	0.5	50	50	ENSMUST00000101144.10	ENSMUSG00000021007.15	Spata7	chr12	protein_coding	spermatogenesis associated 7
chr12	98655887	98659816	-	98655887;98659215	98659131;98659816	ES	0.5	50	50	ENSMUST00000170188.8	ENSMUSG00000021009.16	Ptpn21	chr12	protein_coding	protein tyrosine phosphatase, non-receptor type 21
chr12	98700093	98700729	-	98700093	98703624	A5SS	0.33	50	50	ENSMUST00000170188.8	ENSMUSG00000021009.16	Ptpn21	chr12	protein_coding	protein tyrosine phosphatase, non-receptor type 21
chr12	98700093	98701292	-	98700093	98703624	A5SS	0.33	50	50	ENSMUST00000170188.8	ENSMUSG00000021009.16	Ptpn21	chr12	protein_coding	protein tyrosine phosphatase, non-receptor type 21
chr12	98700093	98701292	-	98700093	98700729	5pMXE	0.33	50	50	ENSMUST00000085116.4	ENSMUSG00000021009.16	Ptpn21	chr12	protein_coding	protein tyrosine phosphatase, non-receptor type 21
chr12	98713781	98722444	+	98713781;98719151	98719037;98722444	ES	0.5	50	50	ENSMUST00000110104.10	ENSMUSG00000021012.17	Zc3h14	chr12	protein_coding	zinc finger CCCH type containing 14
chr12	98730237	98749841	+	98730237;98740578	98740504;98749841	ES	0.25	50	50	ENSMUST00000110104.10	ENSMUSG00000021012.17	Zc3h14	chr12	protein_coding	zinc finger CCCH type containing 14
chr12	98740578;98745526	98745367;98749841	+	98740578	98749841	cassetteExon	0.5	100	100	ENSMUST00000110104.10	ENSMUSG00000021012.17	Zc3h14	chr12	protein_coding	zinc finger CCCH type containing 14
chr12	98751311	98751589	+	98751311	98751577	A3SS	0.5	50	50	ENSMUST00000110104.10	ENSMUSG00000021012.17	Zc3h14	chr12	protein_coding	zinc finger CCCH type containing 14
chr12	98737908	98740504	+	98730237	98740504	A5SS	0.5	50	50	ENSMUST00000110104.10	ENSMUSG00000021012.17	Zc3h14	chr12	protein_coding	zinc finger CCCH type containing 14
chr12	98746539	98749841	+	98740578	98749841	A5SS	0.25	50	50	ENSMUST00000110104.10	ENSMUSG00000021012.17	Zc3h14	chr12	protein_coding	zinc finger CCCH type containing 14
chr12	98745526	98749841	+	98730237	98749841	A5SS	0.25	50	50	ENSMUST00000222461.2	ENSMUSG00000021012.17	Zc3h14	chr12	protein_coding	zinc finger CCCH type containing 14
chr12	98746539	98749841	+	98730237	98749841	A5SS	0.25	50	50	ENSMUST00000222461.2	ENSMUSG00000021012.17	Zc3h14	chr12	protein_coding	zinc finger CCCH type containing 14
chr12	98745526	98749841	+	98745526;98746539	98746307;98749841	ES	0.25	50	50	ENSMUST00000110105.10	ENSMUSG00000021012.17	Zc3h14	chr12	protein_coding	zinc finger CCCH type containing 14
chr12	98784157;98787873	98787859;98790893	-	98784157	98790893	cassetteExon	0.5	100	100	ENSMUST00000065716.8	ENSMUSG00000051166.11	Eml5	chr12	protein_coding	echinoderm microtubule associated protein like 5
chr12	98765188	98767162	-	98765207	98767162	A3SS	0.5	50	50	ENSMUST00000065716.8	ENSMUSG00000051166.11	Eml5	chr12	protein_coding	echinoderm microtubule associated protein like 5
chr12	98839464	98840766	-	98839347	98840766	A3SS	0.5	50	50	ENSMUST00000065716.8	ENSMUSG00000051166.11	Eml5	chr12	protein_coding	echinoderm microtubule associated protein like 5
chr12	98784157	98786120	-	98784157	98790893	A5SS	0.33	50	50	ENSMUST00000065716.8	ENSMUSG00000051166.11	Eml5	chr12	protein_coding	echinoderm microtubule associated protein like 5
chr12	98784157	98787859	-	98784157;98786128	98786120;98787859	ES	0.5	50	50	ENSMUST00000223282.2	ENSMUSG00000051166.11	Eml5	chr12	protein_coding	echinoderm microtubule associated protein like 5
chr12	98887042;98903408	98903379;98908477	+	98887042	98908477	cassetteExon	0.5	100	100	ENSMUST00000085109.10	ENSMUSG00000021013.17	Ttc8	chr12	protein_coding	tetratricopeptide repeat domain 8
chr12	98930866	98936831	+	98930866	98940901	A3SS	0.5	50	50	ENSMUST00000085109.10	ENSMUSG00000021013.17	Ttc8	chr12	protein_coding	tetratricopeptide repeat domain 8
chr12	98941040	98942249	+	98941040	98942236	A3SS	0.5	50	50	ENSMUST00000085109.10	ENSMUSG00000021013.17	Ttc8	chr12	protein_coding	tetratricopeptide repeat domain 8
chr12	98940738	98940901	+	98930866	98940901	A5SS	0.5	50	50	ENSMUST00000085109.10	ENSMUSG00000021013.17	Ttc8	chr12	protein_coding	tetratricopeptide repeat domain 8
chr12	98887208	98903379	+	98887042	98903379	A5SS	0.5	50	50	ENSMUST00000079146.13	ENSMUSG00000021013.17	Ttc8	chr12	protein_coding	tetratricopeptide repeat domain 8
chr12	98957954	98959056	-	98957954	98959004	A5SS	0.33	50	50	ENSMUST00000221371.2	ENSMUSG00000114021.2	Gm47109	chr12	lncRNA	predicted gene, 47109
chr12	98957954	98959176	-	98957954	98959004	A5SS	0.33	50	50	ENSMUST00000221371.2	ENSMUSG00000114021.2	Gm47109	chr12	lncRNA	predicted gene, 47109
chr12	98957954	98959176	-	98957954	98959056	A5SS	0.33	50	50	ENSMUST00000222313.2	ENSMUSG00000114021.2	Gm47109	chr12	lncRNA	predicted gene, 47109
chr12	99355176	99378728	-	99355176	99359929	5pMXE	0.25	50	50	ENSMUST00000046859.12	ENSMUSG00000033713.13	Foxn3	chr12	protein_coding	forkhead box N3
chr12	99355176	99416284	-	99355176	99359929	5pMXE	0.25	50	50	ENSMUST00000046859.12	ENSMUSG00000033713.13	Foxn3	chr12	protein_coding	forkhead box N3
chr12	99175825;99185922	99185857;99257496	-	99175825	99257496	cassetteExon	0.5	100	100	ENSMUST00000046859.12	ENSMUSG00000033713.13	Foxn3	chr12	protein_coding	forkhead box N3
chr12	99175825;99185922	99185860;99257496	-	99175825	99257496	cassetteExon	0.5	100	100	ENSMUST00000046859.12	ENSMUSG00000033713.13	Foxn3	chr12	protein_coding	forkhead box N3
chr12	99257560	99296234	-	99257560	99307681	A5SS	0.5	50	50	ENSMUST00000046859.12	ENSMUSG00000033713.13	Foxn3	chr12	protein_coding	forkhead box N3
chr12	99307793	99322998	-	99307793	99354620	A5SS	0.5	50	50	ENSMUST00000046859.12	ENSMUSG00000033713.13	Foxn3	chr12	protein_coding	forkhead box N3
chr12	99355176	99359011	-	99355176	99359929	A5SS	0.25	50	50	ENSMUST00000046859.12	ENSMUSG00000033713.13	Foxn3	chr12	protein_coding	forkhead box N3
chr12	99355176	99378728	-	99355176	99359011	5pMXE	0.25	50	50	ENSMUST00000177451.8	ENSMUSG00000033713.13	Foxn3	chr12	protein_coding	forkhead box N3
chr12	99355176	99416284	-	99355176	99359011	5pMXE	0.25	50	50	ENSMUST00000177451.8	ENSMUSG00000033713.13	Foxn3	chr12	protein_coding	forkhead box N3
chr12	99355176	99378728	-	99355176	99416284	A5SS	0.25	50	50	ENSMUST00000085108.8	ENSMUSG00000033713.13	Foxn3	chr12	protein_coding	forkhead box N3
chr12	99175825	99185860	-	99175825	99185857	A5SS	0.33	50	50	ENSMUST00000222458.2	ENSMUSG00000033713.13	Foxn3	chr12	protein_coding	forkhead box N3
chr12	99416368;99421225	99421053;99529730	-	99416368	99529730	cassetteExon	0.5	100	100	ENSMUST00000176928.3	ENSMUSG00000033713.13	Foxn3	chr12	protein_coding	forkhead box N3
chr12	99416368;99522664	99522430;99529730	-	99416368	99529730	cassetteExon	0.5	100	100	ENSMUST00000176928.3	ENSMUSG00000033713.13	Foxn3	chr12	protein_coding	forkhead box N3
chr12	99416368;99421225	99421053;99529730	-	99416368;99522664	99522430;99529730	MXE	0.5	100	100	ENSMUST00000223484.2	ENSMUSG00000033713.13	Foxn3	chr12	protein_coding	forkhead box N3
chr12	99313589	99327610	+	99307484	99327610	A5SS	0.5	50	50	ENSMUST00000126476.8	ENSMUSG00000033731.10	3300002A11Rik	chr12	lncRNA	RIKEN cDNA 3300002A11 gene
chr12	99531531	99579678	+	99531531	99585055	A3SS	0.5	50	50	ENSMUST00000180686.2	ENSMUSG00000097917.3	Gm26839	chr12	lncRNA	predicted gene, 26839
chr12	99849116	99850459	-	99849116	99849541	5pMXE	0.5	50	50	ENSMUST00000221929.2	ENSMUSG00000021176.7	Efcab11	chr12	protein_coding	EF-hand calcium binding domain 11
chr12	99685362	99820869	-	99659461	99820869	A3SS	0.5	50	50	ENSMUST00000221929.2	ENSMUSG00000021176.7	Efcab11	chr12	protein_coding	EF-hand calcium binding domain 11
chr12	99842981	99844616	-	99821898	99844616	A3SS	0.5	50	50	ENSMUST00000221929.2	ENSMUSG00000021176.7	Efcab11	chr12	protein_coding	EF-hand calcium binding domain 11
chr12	99844657	99849021	-	99844661	99849021	A3SS	0.5	50	50	ENSMUST00000221929.2	ENSMUSG00000021176.7	Efcab11	chr12	protein_coding	EF-hand calcium binding domain 11
chr12	99850811;99852979	99852737;99857436	+	99850811	99857436	cassetteExon	0.5	100	100	ENSMUST00000151019.8	ENSMUSG00000021177.17	Tdp1	chr12	protein_coding	tyrosyl-DNA phosphodiesterase 1
chr12	99881816	99885327	+	99881816	99901264	A3SS	0.5	50	50	ENSMUST00000151019.8	ENSMUSG00000021177.17	Tdp1	chr12	protein_coding	tyrosyl-DNA phosphodiesterase 1
chr12	99852979	99857436	+	99852979	99853342	3pMXE	0.5	50	50	ENSMUST00000125639.2	ENSMUSG00000021177.17	Tdp1	chr12	protein_coding	tyrosyl-DNA phosphodiesterase 1
chr12	99850811	99857436	+	99852979	99857436	5pMXE	0.5	50	50	ENSMUST00000137653.2	ENSMUSG00000021177.17	Tdp1	chr12	protein_coding	tyrosyl-DNA phosphodiesterase 1
chr12	99931074	99931463	+	99931060	99931463	A5SS	0.33	50	50	ENSMUST00000160413.8	ENSMUSG00000045404.17	Kcnk13	chr12	protein_coding	potassium channel, subfamily K, member 13
chr12	99931111	99931463	+	99931060	99931463	A5SS	0.33	50	50	ENSMUST00000160413.8	ENSMUSG00000045404.17	Kcnk13	chr12	protein_coding	potassium channel, subfamily K, member 13
chr12	99931111	99931463	+	99931074	99931463	A5SS	0.33	50	50	ENSMUST00000177549.8	ENSMUSG00000045404.17	Kcnk13	chr12	protein_coding	potassium channel, subfamily K, member 13
chr12	100043785	100063150	-	100043785	100063288	A5SS	0.5	50	50	ENSMUST00000220814.2	ENSMUSG00000113268.2	4930477G07Rik	chr12	lncRNA	RIKEN cDNA 4930477G07 gene
chr12	100081221	100081679	+	100081221	100081728	A3SS	0.5	50	50	ENSMUST00000222374.2	ENSMUSG00000021178.10	Psmc1	chr12	protein_coding	protease (prosome, macropain) 26S subunit, ATPase 1
chr12	100076762	100078590	+	100076470	100078590	A5SS	0.5	50	50	ENSMUST00000222374.2	ENSMUSG00000021178.10	Psmc1	chr12	protein_coding	protease (prosome, macropain) 26S subunit, ATPase 1
chr12	100116309	100117485	-	100116309	100117470	A5SS	0.5	50	50	ENSMUST00000021596.9	ENSMUSG00000021179.9	Nrde2	chr12	protein_coding	nrde-2 necessary for RNA interference, domain containing
chr12	100155063	100155150	+	100154606	100155150	A5SS	0.5	50	50	ENSMUST00000146364.8	ENSMUSG00000072884.11	Gm10433	chr12	lncRNA	predicted gene 10433
chr12	100166564	100168652	+	100165975	100168652	A5SS	0.5	50	50	ENSMUST00000110082.11	ENSMUSG00000001175.17	Calm1	chr12	protein_coding	calmodulin 1
chr12	100261989	100267216	+	100261989	100262763	3pMXE	0.33	50	50	ENSMUST00000223300.2	ENSMUSG00000113679.2	Gm10432	chr12	lncRNA	predicted gene 10432
chr12	100261989	100263192	+	100261989	100262763	A3SS	0.33	50	50	ENSMUST00000223300.2	ENSMUSG00000113679.2	Gm10432	chr12	lncRNA	predicted gene 10432
chr12	100256675	100261888	+	100256683	100261888	A5SS	0.5	50	50	ENSMUST00000223300.2	ENSMUSG00000113679.2	Gm10432	chr12	lncRNA	predicted gene 10432
chr12	100261989	100267216	+	100261989	100263192	3pMXE	0.33	50	50	ENSMUST00000223440.2	ENSMUSG00000113679.2	Gm10432	chr12	lncRNA	predicted gene 10432
chr12	100298978;100306806	100306756;100314195	-	100298978	100314195	cassetteExon	0.5	100	100	ENSMUST00000062957.8	ENSMUSG00000033530.9	Ttc7b	chr12	protein_coding	tetratricopeptide repeat domain 7B
chr12	100385829;100412238	100412215;100413119	-	100385829	100413119	cassetteExon	0.5	100	100	ENSMUST00000062957.8	ENSMUSG00000033530.9	Ttc7b	chr12	protein_coding	tetratricopeptide repeat domain 7B
chr12	100310252	100314195	-	100298978	100314195	A3SS	0.33	50	50	ENSMUST00000062957.8	ENSMUSG00000033530.9	Ttc7b	chr12	protein_coding	tetratricopeptide repeat domain 7B
chr12	100364925	100369616	-	100353453	100369616	A3SS	0.5	50	50	ENSMUST00000062957.8	ENSMUSG00000033530.9	Ttc7b	chr12	protein_coding	tetratricopeptide repeat domain 7B
chr12	100298978	100304201	-	100298978	100314195	A5SS	0.33	50	50	ENSMUST00000062957.8	ENSMUSG00000033530.9	Ttc7b	chr12	protein_coding	tetratricopeptide repeat domain 7B
chr12	100306806;100310252	100310091;100314195	-	100306806	100314195	cassetteExon	0.5	100	100	ENSMUST00000223020.2	ENSMUSG00000033530.9	Ttc7b	chr12	protein_coding	tetratricopeptide repeat domain 7B
chr12	100298978	100304201	-	100298978	100306756	A5SS	0.33	50	50	ENSMUST00000223020.2	ENSMUSG00000033530.9	Ttc7b	chr12	protein_coding	tetratricopeptide repeat domain 7B
chr12	100385829	100413119	-	100412238	100413119	3pMXE	0.5	50	50	ENSMUST00000222036.2	ENSMUSG00000033530.9	Ttc7b	chr12	protein_coding	tetratricopeptide repeat domain 7B
chr12	100431952	100449149	+	100431952	100444134	3pMXE	0.33	50	50	ENSMUST00000222411.2	ENSMUSG00000113895.2	Gm48383	chr12	lncRNA	predicted gene, 48383
chr12	100431952	100432040	+	100431952	100444134	A3SS	0.33	50	50	ENSMUST00000222411.2	ENSMUSG00000113895.2	Gm48383	chr12	lncRNA	predicted gene, 48383
chr12	100431952	100432040	+	100431952	100449149	A3SS	0.33	50	50	ENSMUST00000221602.2	ENSMUSG00000113895.2	Gm48383	chr12	lncRNA	predicted gene, 48383
chr12	100520692	100537088	-	100520692;100524899	100524708;100537088	ES	0.5	50	50	ENSMUST00000222731.2	ENSMUSG00000021180.10	Rps6ka5	chr12	protein_coding	ribosomal protein S6 kinase, polypeptide 5
chr12	100582363	100620530	-	100582363;100585900	100585785;100620530	ES	0.5	50	50	ENSMUST00000222731.2	ENSMUSG00000021180.10	Rps6ka5	chr12	protein_coding	ribosomal protein S6 kinase, polypeptide 5
chr12	100644848	100693088	-	100644848	100691040	5pMXE	0.25	50	50	ENSMUST00000222731.2	ENSMUSG00000021180.10	Rps6ka5	chr12	protein_coding	ribosomal protein S6 kinase, polypeptide 5
chr12	100537258;100540251	100540057;100540690	-	100537258	100540690	cassetteExon	0.5	100	100	ENSMUST00000222731.2	ENSMUSG00000021180.10	Rps6ka5	chr12	protein_coding	ribosomal protein S6 kinase, polypeptide 5
chr12	100560823	100562074	-	100547705	100562074	A3SS	0.5	50	50	ENSMUST00000222731.2	ENSMUSG00000021180.10	Rps6ka5	chr12	protein_coding	ribosomal protein S6 kinase, polypeptide 5
chr12	100644848	100679037	-	100644848	100691040	A5SS	0.25	50	50	ENSMUST00000222731.2	ENSMUSG00000021180.10	Rps6ka5	chr12	protein_coding	ribosomal protein S6 kinase, polypeptide 5
chr12	100644848	100690736	-	100644848	100691040	A5SS	0.25	50	50	ENSMUST00000222731.2	ENSMUSG00000021180.10	Rps6ka5	chr12	protein_coding	ribosomal protein S6 kinase, polypeptide 5
chr12	100520692	100537088	-	100520692	100524708	5pMXE	0.5	50	50	ENSMUST00000221323.2	ENSMUSG00000021180.10	Rps6ka5	chr12	protein_coding	ribosomal protein S6 kinase, polypeptide 5
chr12	100644848	100690736	-	100644848	100679037	5pMXE	0.25	50	50	ENSMUST00000221246.2	ENSMUSG00000021180.10	Rps6ka5	chr12	protein_coding	ribosomal protein S6 kinase, polypeptide 5
chr12	100644848	100693088	-	100644848	100679037	5pMXE	0.25	50	50	ENSMUST00000221246.2	ENSMUSG00000021180.10	Rps6ka5	chr12	protein_coding	ribosomal protein S6 kinase, polypeptide 5
chr12	100644848	100693088	-	100644848	100690736	5pMXE	0.25	50	50	ENSMUST00000221379.2	ENSMUSG00000021180.10	Rps6ka5	chr12	protein_coding	ribosomal protein S6 kinase, polypeptide 5
chr12	100795984	100804759	+	100795984;100801594	100801444;100804759	ES	0.5	50	50	ENSMUST00000069782.11	ENSMUSG00000021185.17	Dglucy	chr12	protein_coding	D-glutamate cyclase
chr12	100833514	100861720	+	100833514	100837563	3pMXE	0.5	50	50	ENSMUST00000069782.11	ENSMUSG00000021185.17	Dglucy	chr12	protein_coding	D-glutamate cyclase
chr12	100745569;100753931	100753875;100795858	+	100745569	100795858	cassetteExon	0.5	100	100	ENSMUST00000069782.11	ENSMUSG00000021185.17	Dglucy	chr12	protein_coding	D-glutamate cyclase
chr12	100745569	100752397	+	100745569	100795858	A3SS	0.33	50	50	ENSMUST00000069782.11	ENSMUSG00000021185.17	Dglucy	chr12	protein_coding	D-glutamate cyclase
chr12	100745569	100753875	+	100745569;100752505	100752397;100753875	ES	0.5	50	50	ENSMUST00000110073.8	ENSMUSG00000021185.17	Dglucy	chr12	protein_coding	D-glutamate cyclase
chr12	100858564	100861720	+	100833514	100861720	A5SS	0.5	50	50	ENSMUST00000110070.8	ENSMUSG00000021185.17	Dglucy	chr12	protein_coding	D-glutamate cyclase
chr12	100745569	100753875	+	100752505	100753875	5pMXE	0.5	50	50	ENSMUST00000167322.2	ENSMUSG00000021185.17	Dglucy	chr12	protein_coding	D-glutamate cyclase
chr12	100854331;100865579	100865502;100874358	-	100854331	100874358	cassetteExon	0.5	100	100	ENSMUST00000110066.8	ENSMUSG00000047415.13	Gpr68	chr12	protein_coding	G protein-coupled receptor 68
chr12	100845671	100854243	-	100845671	100853940	A5SS	0.5	50	50	ENSMUST00000110066.8	ENSMUSG00000047415.13	Gpr68	chr12	protein_coding	G protein-coupled receptor 68
chr12	100854331	100874358	-	100854331	100865502	5pMXE	0.5	50	50	ENSMUST00000053668.10	ENSMUSG00000047415.13	Gpr68	chr12	protein_coding	G protein-coupled receptor 68
chr12	100889627;100891909	100891471;100895086	-	100889627	100895086	cassetteExon	0.5	100	100	ENSMUST00000068411.5	ENSMUSG00000021182.17	Ccdc88c	chr12	protein_coding	coiled-coil domain containing 88C
chr12	100906499	100911106	-	100908383	100911106	A3SS&ES	0.5	50	50	ENSMUST00000068411.5	ENSMUSG00000021182.17	Ccdc88c	chr12	protein_coding	coiled-coil domain containing 88C
chr12	100913517	100914706	-	100913496	100914706	A3SS	0.5	50	50	ENSMUST00000068411.5	ENSMUSG00000021182.17	Ccdc88c	chr12	protein_coding	coiled-coil domain containing 88C
chr12	100936281	100936651	-	100934653	100936651	A3SS	0.33	50	50	ENSMUST00000068411.5	ENSMUSG00000021182.17	Ccdc88c	chr12	protein_coding	coiled-coil domain containing 88C
chr12	100936294	100936651	-	100934653	100936651	A3SS	0.33	50	50	ENSMUST00000068411.5	ENSMUSG00000021182.17	Ccdc88c	chr12	protein_coding	coiled-coil domain containing 88C
chr12	100887854	100888451	-	100887854	100889439	A5SS	0.5	50	50	ENSMUST00000068411.5	ENSMUSG00000021182.17	Ccdc88c	chr12	protein_coding	coiled-coil domain containing 88C
chr12	100905417	100906346	-	100905417	100906344	A5SS	0.5	50	50	ENSMUST00000068411.5	ENSMUSG00000021182.17	Ccdc88c	chr12	protein_coding	coiled-coil domain containing 88C
chr12	100937538	100948492	-	100937538	100950159	A5SS	0.5	50	50	ENSMUST00000068411.5	ENSMUSG00000021182.17	Ccdc88c	chr12	protein_coding	coiled-coil domain containing 88C
chr12	100936294	100936651	-	100936281	100936651	A3SS	0.33	50	50	ENSMUST00000223416.2	ENSMUSG00000021182.17	Ccdc88c	chr12	protein_coding	coiled-coil domain containing 88C
chr12	100908611	100909006	+	100908611	100912636	A3SS	0.5	50	50	ENSMUST00000180617.2	ENSMUSG00000097160.3	A630072L19Rik	chr12	lncRNA	RIKEN cDNA A630072L19 gene
chr12	100953068	100957983	+	100953068;100953974	100953535;100957983	ES	0.5	50	50	ENSMUST00000223029.2	ENSMUSG00000113634.2	Gm36756	chr12	lncRNA	predicted gene, 36756
chr12	100958647	100966596	+	100958647	100980823	A3SS	0.5	50	50	ENSMUST00000223029.2	ENSMUSG00000113634.2	Gm36756	chr12	lncRNA	predicted gene, 36756
chr12	100973530	100980823	+	100958647	100980823	A5SS	0.5	50	50	ENSMUST00000223029.2	ENSMUSG00000113634.2	Gm36756	chr12	lncRNA	predicted gene, 36756
chr12	100959390	100966596	+	100958647	100966596	A5SS	0.5	50	50	ENSMUST00000222011.2	ENSMUSG00000113634.2	Gm36756	chr12	lncRNA	predicted gene, 36756
chr12	101010918;101011940	101011785;101015919	-	101010918	101015919	cassetteExon	0.5	100	100	ENSMUST00000048305.10	ENSMUSG00000041846.16	Ppp4r3a	chr12	protein_coding	protein phosphatase 4 regulatory subunit 3A
chr12	101030995	101031243	-	101025200	101031243	A3SS	0.5	50	50	ENSMUST00000048305.10	ENSMUSG00000041846.16	Ppp4r3a	chr12	protein_coding	protein phosphatase 4 regulatory subunit 3A
chr12	101008310	101008738	-	101008310	101008714	A5SS	0.5	50	50	ENSMUST00000048305.10	ENSMUSG00000041846.16	Ppp4r3a	chr12	protein_coding	protein phosphatase 4 regulatory subunit 3A
chr12	101017921	101019688	-	101017921	101019727	A5SS	0.5	50	50	ENSMUST00000048305.10	ENSMUSG00000041846.16	Ppp4r3a	chr12	protein_coding	protein phosphatase 4 regulatory subunit 3A
chr12	101050284;101050758	101050543;101054301	+	101050284	101054301	cassetteExon	0.5	100	100	ENSMUST00000180800.2	ENSMUSG00000097121.3	D130020L05Rik	chr12	lncRNA	RIKEN cDNA D130020L05 gene
chr12	101052611	101054301	+	101050284	101054301	A5SS	0.33	50	50	ENSMUST00000180800.2	ENSMUSG00000097121.3	D130020L05Rik	chr12	lncRNA	RIKEN cDNA D130020L05 gene
chr12	101050758;101052611	101052447;101054301	+	101050758	101054301	cassetteExon	0.5	100	100	ENSMUST00000221614.2	ENSMUSG00000097121.3	D130020L05Rik	chr12	lncRNA	RIKEN cDNA D130020L05 gene
chr12	101050284	101054301	+	101050758	101054301	A5SS	0.33	50	50	ENSMUST00000220889.2	ENSMUSG00000097121.3	D130020L05Rik	chr12	lncRNA	RIKEN cDNA D130020L05 gene
chr12	101375666	101378580	+	101375666	101384342	A3SS	0.5	50	50	ENSMUST00000221965.2	ENSMUSG00000047014.8	Catsperb	chr12	protein_coding	cation channel sperm associated auxiliary subunit beta
chr12	101412380	101429295	+	101412380	101554244	A3SS	0.5	50	50	ENSMUST00000221965.2	ENSMUSG00000047014.8	Catsperb	chr12	protein_coding	cation channel sperm associated auxiliary subunit beta
chr12	101381628	101384342	+	101375666	101384342	A5SS	0.5	50	50	ENSMUST00000221965.2	ENSMUSG00000047014.8	Catsperb	chr12	protein_coding	cation channel sperm associated auxiliary subunit beta
chr12	101542237	101554244	+	101412380	101554244	A5SS	0.5	50	50	ENSMUST00000221965.2	ENSMUSG00000047014.8	Catsperb	chr12	protein_coding	cation channel sperm associated auxiliary subunit beta
chr12	101378668	101381488	+	101378627	101381488	A5SS	0.5	50	50	ENSMUST00000220474.2	ENSMUSG00000047014.8	Catsperb	chr12	protein_coding	cation channel sperm associated auxiliary subunit beta
chr12	101476784	101507667	+	101476784;101486906	101486762;101507667	ES	0.33	50	50	ENSMUST00000055156.5	ENSMUSG00000047014.8	Catsperb	chr12	protein_coding	cation channel sperm associated auxiliary subunit beta
chr12	101507821;101515725	101515602;101515953	+	101507821	101515953	cassetteExon	0.5	100	100	ENSMUST00000055156.5	ENSMUSG00000047014.8	Catsperb	chr12	protein_coding	cation channel sperm associated auxiliary subunit beta
chr12	101486906	101496767	+	101486906	101507667	A3SS	0.5	50	50	ENSMUST00000055156.5	ENSMUSG00000047014.8	Catsperb	chr12	protein_coding	cation channel sperm associated auxiliary subunit beta
chr12	101498916	101507667	+	101486906	101507667	A5SS	0.33	50	50	ENSMUST00000055156.5	ENSMUSG00000047014.8	Catsperb	chr12	protein_coding	cation channel sperm associated auxiliary subunit beta
chr12	101498916	101507667	+	101476784	101507667	A5SS	0.33	50	50	ENSMUST00000221241.2	ENSMUSG00000047014.8	Catsperb	chr12	protein_coding	cation channel sperm associated auxiliary subunit beta
chr12	101619112	101644773	-	101619112;101632003	101631812;101644773	ES	0.5	50	50	ENSMUST00000162735.8	ENSMUSG00000021187.15	Tc2n	chr12	protein_coding	tandem C2 domains, nuclear
chr12	101675795	101677359	-	101675795	101684661	A5SS	0.5	50	50	ENSMUST00000162735.8	ENSMUSG00000021187.15	Tc2n	chr12	protein_coding	tandem C2 domains, nuclear
chr12	101780855	101784492	-	101780855	101784993	A5SS	0.5	50	50	ENSMUST00000021603.9	ENSMUSG00000021186.10	Fbln5	chr12	protein_coding	fibulin 5
chr12	101853279	101856837	-	101853279;101856050	101855964;101856837	ES	0.5	50	50	ENSMUST00000021605.14	ENSMUSG00000021188.15	Trip11	chr12	protein_coding	thyroid hormone receptor interactor 11
chr12	101845151	101849515	-	101845188	101849515	A3SS	0.5	50	50	ENSMUST00000021605.14	ENSMUSG00000021188.15	Trip11	chr12	protein_coding	thyroid hormone receptor interactor 11
chr12	101872072	101878949	-	101872075	101878949	A3SS	0.33	50	50	ENSMUST00000021605.14	ENSMUSG00000021188.15	Trip11	chr12	protein_coding	thyroid hormone receptor interactor 11
chr12	101878811	101878949	-	101872075	101878949	A3SS	0.33	50	50	ENSMUST00000021605.14	ENSMUSG00000021188.15	Trip11	chr12	protein_coding	thyroid hormone receptor interactor 11
chr12	101856877	101860036	-	101856877	101859690	A5SS	0.5	50	50	ENSMUST00000021605.14	ENSMUSG00000021188.15	Trip11	chr12	protein_coding	thyroid hormone receptor interactor 11
chr12	101860052	101860574	-	101860052	101860521	A5SS	0.5	50	50	ENSMUST00000021605.14	ENSMUSG00000021188.15	Trip11	chr12	protein_coding	thyroid hormone receptor interactor 11
chr12	101878811	101878949	-	101872072	101878949	A3SS	0.33	50	50	ENSMUST00000177536.8	ENSMUSG00000021188.15	Trip11	chr12	protein_coding	thyroid hormone receptor interactor 11
chr12	101853279	101856837	-	101856050	101856837	3pMXE	0.5	50	50	ENSMUST00000176728.2	ENSMUSG00000021188.15	Trip11	chr12	protein_coding	thyroid hormone receptor interactor 11
chr12	101899319	101900507	-	101899323	101900507	A3SS	0.5	50	50	ENSMUST00000021606.12	ENSMUSG00000021189.12	Atxn3	chr12	protein_coding	ataxin 3
chr12	101914304	101914534	-	101914307	101914534	A3SS	0.5	50	50	ENSMUST00000021606.12	ENSMUSG00000021189.12	Atxn3	chr12	protein_coding	ataxin 3
chr12	101892840	101899215	-	101892840	101899227	A5SS	0.5	50	50	ENSMUST00000021606.12	ENSMUSG00000021189.12	Atxn3	chr12	protein_coding	ataxin 3
chr12	101935896	101943043	-	101935896	101941919	5pMXE	0.5	50	50	ENSMUST00000221422.2	ENSMUSG00000113902.2	Ndufb1	chr12	protein_coding	NADH:ubiquinone oxidoreductase subunit B1
chr12	101935893	101941919	-	101935896	101941919	A3SS	0.5	50	50	ENSMUST00000221422.2	ENSMUSG00000113902.2	Ndufb1	chr12	protein_coding	NADH:ubiquinone oxidoreductase subunit B1
chr12	101942520	101943043	-	101935896	101943043	A3SS	0.5	50	50	ENSMUST00000221227.2	ENSMUSG00000113902.2	Ndufb1	chr12	protein_coding	NADH:ubiquinone oxidoreductase subunit B1
chr12	102196752	102200941	+	102196695	102200941	A5SS	0.5	50	50	ENSMUST00000159329.8	ENSMUSG00000041771.15	Slc24a4	chr12	protein_coding	solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
chr12	102292171	102292593	+	102292171	102317141	A3SS	0.5	50	50	ENSMUST00000056950.14	ENSMUSG00000044456.17	Rin3	chr12	protein_coding	Ras and Rab interactor 3
chr12	102325055	102327585	+	102325055	102334623	A3SS	0.5	50	50	ENSMUST00000056950.14	ENSMUSG00000044456.17	Rin3	chr12	protein_coding	Ras and Rab interactor 3
chr12	102250041	102279234	+	102249585	102279234	A5SS	0.5	50	50	ENSMUST00000056950.14	ENSMUSG00000044456.17	Rin3	chr12	protein_coding	Ras and Rab interactor 3
chr12	102321173	102324964	+	102317213	102324964	A5SS	0.5	50	50	ENSMUST00000056950.14	ENSMUSG00000044456.17	Rin3	chr12	protein_coding	Ras and Rab interactor 3
chr12	102460118	102463706	+	102460118;102462022	102461959;102463706	ES	0.5	50	50	ENSMUST00000179218.9	ENSMUSG00000021192.17	Golga5	chr12	protein_coding	golgi autoantigen, golgin subfamily a, 5
chr12	102436240	102438257	+	102435622	102438257	A5SS	0.5	50	50	ENSMUST00000179218.9	ENSMUSG00000021192.17	Golga5	chr12	protein_coding	golgi autoantigen, golgin subfamily a, 5
chr12	102641726	102686311	-	102641726	102670981	5pMXE	0.33	50	50	ENSMUST00000046518.12	ENSMUSG00000057963.10	Itpk1	chr12	protein_coding	inositol 1,3,4-triphosphate 5/6 kinase
chr12	102589684;102641223	102641140;102641702	-	102589684	102641702	cassetteExon	0.5	100	100	ENSMUST00000046518.12	ENSMUSG00000057963.10	Itpk1	chr12	protein_coding	inositol 1,3,4-triphosphate 5/6 kinase
chr12	102554821	102560161	-	102554821	102572348	A5SS	0.5	50	50	ENSMUST00000046518.12	ENSMUSG00000057963.10	Itpk1	chr12	protein_coding	inositol 1,3,4-triphosphate 5/6 kinase
chr12	102589684	102607144	-	102589684	102641702	A5SS	0.33	50	50	ENSMUST00000046518.12	ENSMUSG00000057963.10	Itpk1	chr12	protein_coding	inositol 1,3,4-triphosphate 5/6 kinase
chr12	102641726	102661970	-	102641726	102670981	A5SS	0.33	50	50	ENSMUST00000046518.12	ENSMUSG00000057963.10	Itpk1	chr12	protein_coding	inositol 1,3,4-triphosphate 5/6 kinase
chr12	102589684	102641140	-	102589684	102607144	5pMXE	0.33	50	50	ENSMUST00000191320.7	ENSMUSG00000057963.10	Itpk1	chr12	protein_coding	inositol 1,3,4-triphosphate 5/6 kinase
chr12	102641726	102686311	-	102641726	102661970	5pMXE	0.33	50	50	ENSMUST00000179210.2	ENSMUSG00000057963.10	Itpk1	chr12	protein_coding	inositol 1,3,4-triphosphate 5/6 kinase
chr12	102686453	102723800	-	102686453	102693463	5pMXE	0.5	50	50	ENSMUST00000178129.2	ENSMUSG00000096751.4	Gm28373	chr12	lncRNA	predicted gene 28373
chr12	102709653	102723800	-	102686453	102723800	A3SS	0.25	50	50	ENSMUST00000179306.2	ENSMUSG00000098530.2	Gm28051	chr12	protein_coding	predicted gene, 28051
chr12	102720425	102723800	-	102686453	102723800	A3SS	0.25	50	50	ENSMUST00000179306.2	ENSMUSG00000098530.2	Gm28051	chr12	protein_coding	predicted gene, 28051
chr12	102722801	102723800	-	102686453	102723800	A3SS	0.25	50	50	ENSMUST00000179306.2	ENSMUSG00000098530.2	Gm28051	chr12	protein_coding	predicted gene, 28051
chr12	102720425	102723800	-	102709653	102723800	A3SS	0.25	50	50	ENSMUST00000174651.2	ENSMUSG00000041716.8	Gm20604	chr12	protein_coding	predicted gene 20604
chr12	102722801	102723800	-	102709653	102723800	A3SS	0.25	50	50	ENSMUST00000174651.2	ENSMUSG00000041716.8	Gm20604	chr12	protein_coding	predicted gene 20604
chr12	102709653	102709758	-	102709653	102723800	A5SS	0.33	50	50	ENSMUST00000174651.2	ENSMUSG00000041716.8	Gm20604	chr12	protein_coding	predicted gene 20604
chr12	102709653	102709802	-	102709653	102723800	A5SS	0.33	50	50	ENSMUST00000174651.2	ENSMUSG00000041716.8	Gm20604	chr12	protein_coding	predicted gene 20604
chr12	102709653	102709802	-	102709653	102709758	A5SS	0.33	50	50	ENSMUST00000173760.9	ENSMUSG00000096458.8	Moap1	chr12	protein_coding	modulator of apoptosis 1
chr12	102722801	102723800	-	102720425	102723800	A3SS	0.25	50	50	ENSMUST00000173969.2	ENSMUSG00000091931.6	Gon7	chr12	protein_coding	GON7 subunit of KEOPS complex
chr12	102806546	102844475	-	102806546;102807450	102807298;102844475	ES	0.5	50	50	ENSMUST00000223554.2	ENSMUSG00000041702.8	Btbd7	chr12	protein_coding	BTB (POZ) domain containing 7
chr12	103061396;103062875	103062810;103070868	+	103061396	103070868	cassetteExon	0.5	100	100	ENSMUST00000101099.12	ENSMUSG00000021198.17	Unc79	chr12	protein_coding	unc-79 homolog
chr12	103075037;103077632	103077483;103078281	+	103075037	103078281	cassetteExon	0.5	100	100	ENSMUST00000101099.12	ENSMUSG00000021198.17	Unc79	chr12	protein_coding	unc-79 homolog
chr12	103088702;103091984	103091868;103094488	+	103088702	103094488	cassetteExon	0.5	100	100	ENSMUST00000101099.12	ENSMUSG00000021198.17	Unc79	chr12	protein_coding	unc-79 homolog
chr12	102957729	102964856	+	102957729	102964697	A3SS	0.5	50	50	ENSMUST00000101099.12	ENSMUSG00000021198.17	Unc79	chr12	protein_coding	unc-79 homolog
chr12	103071154	103074477	+	103071154	103074375	A3SS	0.5	50	50	ENSMUST00000101099.12	ENSMUSG00000021198.17	Unc79	chr12	protein_coding	unc-79 homolog
chr12	103108323	103108874	+	103108323	103108846	A3SS	0.5	50	50	ENSMUST00000101099.12	ENSMUSG00000021198.17	Unc79	chr12	protein_coding	unc-79 homolog
chr12	102977551	102987266	+	102977551	103008374	A3SS	0.5	50	50	ENSMUST00000178001.8	ENSMUSG00000021198.17	Unc79	chr12	protein_coding	unc-79 homolog
chr12	102988135	103008374	+	102977551	103008374	A5SS	0.5	50	50	ENSMUST00000178001.8	ENSMUSG00000021198.17	Unc79	chr12	protein_coding	unc-79 homolog
chr12	103075037	103078281	+	103075037	103077483	3pMXE	0.5	50	50	ENSMUST00000177984.2	ENSMUSG00000021198.17	Unc79	chr12	protein_coding	unc-79 homolog
chr12	103163610	103168908	-	103163610;103166173	103166003;103168908	ES	0.5	50	50	ENSMUST00000123655.8	ENSMUSG00000041669.16	Prima1	chr12	protein_coding	proline rich membrane anchor 1
chr12	103169037	103207599	-	103169037;103201980	103201845;103207599	ES	0.5	50	50	ENSMUST00000127843.8	ENSMUSG00000041669.16	Prima1	chr12	protein_coding	proline rich membrane anchor 1
chr12	103201980	103202217	-	103201980	103207599	A5SS	0.5	50	50	ENSMUST00000127843.8	ENSMUSG00000041669.16	Prima1	chr12	protein_coding	proline rich membrane anchor 1
chr12	103281329	103282031	+	103277358	103282031	A5SS	0.5	50	50	ENSMUST00000191218.7	ENSMUSG00000096753.8	Fam181a	chr12	protein_coding	family with sequence similarity 181, member A
chr12	103279203	103280774	-	103279203	103280180	5pMXE	0.5	50	50	ENSMUST00000189971.7	ENSMUSG00000100789.7	Gm29508	chr12	lncRNA	predicted gene 29508
chr12	103302235	103302914	-	103302235	103304336	A5SS	0.5	50	50	ENSMUST00000021617.14	ENSMUSG00000021200.15	Asb2	chr12	protein_coding	ankyrin repeat and SOCS box-containing 2
chr12	103355132	103366455	+	103355132;103359182	103358756;103366455	ES	0.33	50	50	ENSMUST00000101094.9	ENSMUSG00000021203.16	Otub2	chr12	protein_coding	OTU domain, ubiquitin aldehyde binding 2
chr12	103355367	103366455	+	103359182	103366455	A5SS&ES	0.33	50	50	ENSMUST00000101094.9	ENSMUSG00000021203.16	Otub2	chr12	protein_coding	OTU domain, ubiquitin aldehyde binding 2
chr12	103355367	103366455	+	103355132	103366455	A5SS	0.33	50	50	ENSMUST00000021620.13	ENSMUSG00000021203.16	Otub2	chr12	protein_coding	OTU domain, ubiquitin aldehyde binding 2
chr12	103355132	103366455	+	103359182	103366455	5pMXE	0.33	50	50	ENSMUST00000179684.3	ENSMUSG00000021203.16	Otub2	chr12	protein_coding	OTU domain, ubiquitin aldehyde binding 2
chr12	103374528	103376187	-	103374736	103376187	A3SS	0.5	50	50	ENSMUST00000044923.15	ENSMUSG00000041645.15	Ddx24	chr12	protein_coding	DEAD box helicase 24
chr12	103390856	103391785	-	103390856	103392038	A5SS	0.5	50	50	ENSMUST00000044923.15	ENSMUSG00000041645.15	Ddx24	chr12	protein_coding	DEAD box helicase 24
chr12	103390845	103391846	-	103390730	103391846	A3SS	0.5	50	50	ENSMUST00000220975.2	ENSMUSG00000041645.15	Ddx24	chr12	protein_coding	DEAD box helicase 24
chr12	103402941	103405660	+	103402941;103403783	103403649;103405660	ES	0.25	50	50	ENSMUST00000079294.12	ENSMUSG00000064215.14	Ifi27	chr12	protein_coding	interferon, alpha-inducible protein 27
chr12	103402941;103403964	103403935;103405660	+	103402941;103403783	103403649;103405660	MXE	0.5	100	100	ENSMUST00000079294.12	ENSMUSG00000064215.14	Ifi27	chr12	protein_coding	interferon, alpha-inducible protein 27
chr12	103403783;103403964	103403935;103405660	+	103403783	103405660	cassetteExon	0.5	100	100	ENSMUST00000079294.12	ENSMUSG00000064215.14	Ifi27	chr12	protein_coding	interferon, alpha-inducible protein 27
chr12	103402941	103403709	+	103402941	103403649	A3SS	0.25	50	50	ENSMUST00000079294.12	ENSMUSG00000064215.14	Ifi27	chr12	protein_coding	interferon, alpha-inducible protein 27
chr12	103401832;103402941	103402822;103405660	+	103401832	103405660	cassetteExon	0.5	100	100	ENSMUST00000076788.12	ENSMUSG00000064215.14	Ifi27	chr12	protein_coding	interferon, alpha-inducible protein 27
chr12	103403783	103405660	+	103401832	103405660	A5SS	0.25	50	50	ENSMUST00000076788.12	ENSMUSG00000064215.14	Ifi27	chr12	protein_coding	interferon, alpha-inducible protein 27
chr12	103403964	103405660	+	103401832	103405660	A5SS	0.25	50	50	ENSMUST00000076788.12	ENSMUSG00000064215.14	Ifi27	chr12	protein_coding	interferon, alpha-inducible protein 27
chr12	103402941;103403964	103403649;103405660	+	103402941	103405660	cassetteExon	0.5	100	100	ENSMUST00000076702.12	ENSMUSG00000064215.14	Ifi27	chr12	protein_coding	interferon, alpha-inducible protein 27
chr12	103402941;103403783	103403709;103405660	+	103402941	103405660	cassetteExon	0.5	100	100	ENSMUST00000076702.12	ENSMUSG00000064215.14	Ifi27	chr12	protein_coding	interferon, alpha-inducible protein 27
chr12	103402941;103403964	103403709;103405660	+	103402941	103405660	cassetteExon	0.5	100	100	ENSMUST00000076702.12	ENSMUSG00000064215.14	Ifi27	chr12	protein_coding	interferon, alpha-inducible protein 27
chr12	103402941;103403964	103403935;103405660	+	103402941	103405660	cassetteExon	0.5	100	100	ENSMUST00000076702.12	ENSMUSG00000064215.14	Ifi27	chr12	protein_coding	interferon, alpha-inducible protein 27
chr12	103402941;103403783	103403649;103403935	+	103402941	103403935	cassetteExon	0.5	100	100	ENSMUST00000066701.13	ENSMUSG00000064215.14	Ifi27	chr12	protein_coding	interferon, alpha-inducible protein 27
chr12	103402941;103403783	103403709;103403935	+	103402941	103403935	cassetteExon	0.5	100	100	ENSMUST00000066701.13	ENSMUSG00000064215.14	Ifi27	chr12	protein_coding	interferon, alpha-inducible protein 27
chr12	103402941;103403783	103403709;103405660	+	103402941;103403964	103403935;103405660	MXE	0.5	100	100	ENSMUST00000066701.13	ENSMUSG00000064215.14	Ifi27	chr12	protein_coding	interferon, alpha-inducible protein 27
chr12	103402941	103403935	+	103402941	103403649	3pMXE	0.25	50	50	ENSMUST00000122905.8	ENSMUSG00000064215.14	Ifi27	chr12	protein_coding	interferon, alpha-inducible protein 27
chr12	103402941	103405660	+	103402941	103403649	3pMXE	0.25	50	50	ENSMUST00000122905.8	ENSMUSG00000064215.14	Ifi27	chr12	protein_coding	interferon, alpha-inducible protein 27
chr12	103401832	103405660	+	103401832	103402822	3pMXE	0.5	50	50	ENSMUST00000148824.2	ENSMUSG00000064215.14	Ifi27	chr12	protein_coding	interferon, alpha-inducible protein 27
chr12	103402941	103403935	+	103402941	103403709	3pMXE	0.25	50	50	ENSMUST00000140838.2	ENSMUSG00000064215.14	Ifi27	chr12	protein_coding	interferon, alpha-inducible protein 27
chr12	103402941	103405660	+	103402941	103403709	3pMXE	0.25	50	50	ENSMUST00000140838.2	ENSMUSG00000064215.14	Ifi27	chr12	protein_coding	interferon, alpha-inducible protein 27
chr12	103402941	103405660	+	103403964	103405660	5pMXE	0.25	50	50	ENSMUST00000153670.2	ENSMUSG00000064215.14	Ifi27	chr12	protein_coding	interferon, alpha-inducible protein 27
chr12	103403783	103405660	+	103403964	103405660	5pMXE	0.25	50	50	ENSMUST00000153670.2	ENSMUSG00000064215.14	Ifi27	chr12	protein_coding	interferon, alpha-inducible protein 27
chr12	103553815	103557786	+	103553815;103557115	103557038;103557786	ES	0.5	50	50	ENSMUST00000021631.12	ENSMUSG00000021209.13	Ppp4r4	chr12	protein_coding	protein phosphatase 4, regulatory subunit 4
chr12	103524729;103542040	103541968;103542540	+	103524729	103542540	cassetteExon	0.5	100	100	ENSMUST00000021631.12	ENSMUSG00000021209.13	Ppp4r4	chr12	protein_coding	protein phosphatase 4, regulatory subunit 4
chr12	103564507;103564703	103564665;103566623	+	103564507	103566623	cassetteExon	0.5	100	100	ENSMUST00000021631.12	ENSMUSG00000021209.13	Ppp4r4	chr12	protein_coding	protein phosphatase 4, regulatory subunit 4
chr12	103570317;103570951	103570836;103571226	+	103570317	103571226	cassetteExon	0.5	100	100	ENSMUST00000021631.12	ENSMUSG00000021209.13	Ppp4r4	chr12	protein_coding	protein phosphatase 4, regulatory subunit 4
chr12	103592980	103594488	-	103593142	103594488	A3SS	0.5	50	50	ENSMUST00000044231.12	ENSMUSG00000061947.11	Serpina10	chr12	protein_coding	serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10
chr12	103620766;103622702	103622547;103623296	-	103620766	103623296	cassetteExon	0.5	100	100	ENSMUST00000044159.7	ENSMUSG00000060807.8	Serpina6	chr12	protein_coding	serine (or cysteine) peptidase inhibitor, clade A, member 6
chr12	103658275	103659653	-	103658110	103659653	A3SS	0.5	50	50	ENSMUST00000117053.8	ENSMUSG00000021081.13	Serpina1f	chr12	protein_coding	serine (or cysteine) peptidase inhibitor, clade A, member 1F
chr12	103698851	103706345	-	103698851	103704356	5pMXE	0.25	50	50	ENSMUST00000095450.11	ENSMUSG00000071178.12	Serpina1b	chr12	protein_coding	serine (or cysteine) preptidase inhibitor, clade A, member 1B
chr12	103698851	103741774	-	103698851	103704356	5pMXE	0.25	50	50	ENSMUST00000095450.11	ENSMUSG00000071178.12	Serpina1b	chr12	protein_coding	serine (or cysteine) preptidase inhibitor, clade A, member 1B
chr12	103698851;103701590	103701430;103704356	-	103698851	103704356	cassetteExon	0.5	100	100	ENSMUST00000095450.11	ENSMUSG00000071178.12	Serpina1b	chr12	protein_coding	serine (or cysteine) preptidase inhibitor, clade A, member 1B
chr12	103698851	103741774	-	103698851	103706345	5pMXE	0.25	50	50	ENSMUST00000186166.7	ENSMUSG00000071178.12	Serpina1b	chr12	protein_coding	serine (or cysteine) preptidase inhibitor, clade A, member 1B
chr12	103698851	103701430	-	103698851	103706345	A5SS	0.25	50	50	ENSMUST00000186166.7	ENSMUSG00000071178.12	Serpina1b	chr12	protein_coding	serine (or cysteine) preptidase inhibitor, clade A, member 1B
chr12	103698851	103701430	-	103698851	103741774	A5SS	0.25	50	50	ENSMUST00000164454.3	ENSMUSG00000071178.12	Serpina1b	chr12	protein_coding	serine (or cysteine) preptidase inhibitor, clade A, member 1B
chr12	103824315	103829781	-	103824315;103826887	103826673;103829781	ES	0.33	50	50	ENSMUST00000072876.12	ENSMUSG00000066366.15	Serpina1a	chr12	protein_coding	serine (or cysteine) peptidase inhibitor, clade A, member 1A
chr12	103824315;103825503	103825260;103829781	-	103824315;103826887	103826673;103829781	MXE	0.5	100	100	ENSMUST00000072876.12	ENSMUSG00000066366.15	Serpina1a	chr12	protein_coding	serine (or cysteine) peptidase inhibitor, clade A, member 1A
chr12	103824315;103825503	103825260;103829781	-	103824315	103829781	cassetteExon	0.5	100	100	ENSMUST00000085056.8	ENSMUSG00000066366.15	Serpina1a	chr12	protein_coding	serine (or cysteine) peptidase inhibitor, clade A, member 1A
chr12	103917671	103923116	-	103917671	103924993	A5SS	0.5	50	50	ENSMUST00000122229.8	ENSMUSG00000072849.11	Serpina1e	chr12	protein_coding	serine (or cysteine) peptidase inhibitor, clade A, member 1E
chr12	103952768	103962767	-	103952768	103956148	5pMXE	0.25	50	50	ENSMUST00000120251.9	ENSMUSG00000063232.17	Serpina11	chr12	protein_coding	serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11
chr12	103952768;103954748	103954625;103956148	-	103952768	103956148	cassetteExon	0.5	100	100	ENSMUST00000120251.9	ENSMUSG00000063232.17	Serpina11	chr12	protein_coding	serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11
chr12	103952793	103956148	-	103952768	103956148	A3SS	0.33	50	50	ENSMUST00000120251.9	ENSMUSG00000063232.17	Serpina11	chr12	protein_coding	serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11
chr12	103952768	103956120	-	103952768	103956148	A5SS	0.25	50	50	ENSMUST00000120251.9	ENSMUSG00000063232.17	Serpina11	chr12	protein_coding	serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11
chr12	103952768	103962767	-	103952768	103956120	5pMXE	0.25	50	50	ENSMUST00000074693.13	ENSMUSG00000063232.17	Serpina11	chr12	protein_coding	serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11
chr12	103952768	103954625	-	103952768	103956120	A5SS	0.25	50	50	ENSMUST00000074693.13	ENSMUSG00000063232.17	Serpina11	chr12	protein_coding	serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11
chr12	103952793	103956148	-	103954748	103956148	A3SS&ES	0.33	50	50	ENSMUST00000176246.3	ENSMUSG00000063232.17	Serpina11	chr12	protein_coding	serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11
chr12	103952768	103954625	-	103952768	103962767	A5SS	0.25	50	50	ENSMUST00000176106.2	ENSMUSG00000093753.2	Gm28577	chr12	lncRNA	predicted gene 28577
chr12	103975167	103979867	-	103975167	103979862	A5SS	0.5	50	50	ENSMUST00000058464.5	ENSMUSG00000058260.3	Serpina9	chr12	protein_coding	serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9
chr12	104079182	104082212	+	104079182	104084680	A3SS	0.5	50	50	ENSMUST00000109965.8	ENSMUSG00000041536.14	Serpina3a	chr12	protein_coding	serine (or cysteine) peptidase inhibitor, clade A, member 3A
chr12	104082871	104084680	+	104079182	104084680	A5SS	0.5	50	50	ENSMUST00000109965.8	ENSMUSG00000041536.14	Serpina3a	chr12	protein_coding	serine (or cysteine) peptidase inhibitor, clade A, member 3A
chr12	104079182	104084680	+	104079182;104082871	104082212;104084680	ES	0.5	50	50	ENSMUST00000185595.7	ENSMUSG00000041536.14	Serpina3a	chr12	protein_coding	serine (or cysteine) peptidase inhibitor, clade A, member 3A
chr12	104180879	104183128	+	104180879;104181605	104181394;104183128	ES	0.5	50	50	ENSMUST00000121337.8	ENSMUSG00000066363.13	Serpina3f	chr12	protein_coding	serine (or cysteine) peptidase inhibitor, clade A, member 3F
chr12	104180927	104181394	+	104180879	104181394	A5SS	0.5	50	50	ENSMUST00000121337.8	ENSMUSG00000066363.13	Serpina3f	chr12	protein_coding	serine (or cysteine) peptidase inhibitor, clade A, member 3F
chr12	104202577	104204055	+	104202577	104203454	A3SS&ES	0.5	50	50	ENSMUST00000171065.8	ENSMUSG00000041481.18	Serpina3g	chr12	protein_coding	serine (or cysteine) peptidase inhibitor, clade A, member 3G
chr12	104203545	104203994	+	104203545	104204137	A3SS	0.33	50	50	ENSMUST00000171065.8	ENSMUSG00000041481.18	Serpina3g	chr12	protein_coding	serine (or cysteine) peptidase inhibitor, clade A, member 3G
chr12	104203545	104204197	+	104203545	104204137	A3SS	0.33	50	50	ENSMUST00000171065.8	ENSMUSG00000041481.18	Serpina3g	chr12	protein_coding	serine (or cysteine) peptidase inhibitor, clade A, member 3G
chr12	104203545	104203994	+	104203545	104204197	A3SS	0.33	50	50	ENSMUST00000171916.8	ENSMUSG00000041481.18	Serpina3g	chr12	protein_coding	serine (or cysteine) peptidase inhibitor, clade A, member 3G
chr12	104229473	104231353	+	104229473;104230694	104230561;104231353	ES	0.5	50	50	ENSMUST00000109958.3	ENSMUSG00000079014.5	Serpina3i	chr12	protein_coding	serine (or cysteine) peptidase inhibitor, clade A, member 3I
chr12	104304804	104306753	+	104304804	104355323	A3SS	0.5	50	50	ENSMUST00000101078.12	ENSMUSG00000079012.12	Serpina3m	chr12	protein_coding	serine (or cysteine) peptidase inhibitor, clade A, member 3M
chr12	104353482	104355323	+	104304804	104355323	A5SS	0.5	50	50	ENSMUST00000101078.12	ENSMUSG00000079012.12	Serpina3m	chr12	protein_coding	serine (or cysteine) peptidase inhibitor, clade A, member 3M
chr12	104486509	104488301	+	104476441	104488301	A5SS	0.5	50	50	ENSMUST00000220520.2	ENSMUSG00000112954.2	Gm49732	chr12	lncRNA	predicted gene, 49732
chr12	104681165;104686977	104686876;104688230	-	104681165	104688230	cassetteExon	0.5	100	100	ENSMUST00000041987.7	ENSMUSG00000041415.11	Dicer1	chr12	protein_coding	dicer 1, ribonuclease type III
chr12	104664113	104666624	-	104663403	104666624	A3SS	0.5	50	50	ENSMUST00000041987.7	ENSMUSG00000041415.11	Dicer1	chr12	protein_coding	dicer 1, ribonuclease type III
chr12	104698246	104704028	-	104698246	104718007	A5SS	0.5	50	50	ENSMUST00000041987.7	ENSMUSG00000041415.11	Dicer1	chr12	protein_coding	dicer 1, ribonuclease type III
chr12	104738222;104739533	104739441;104740032	-	104738222	104740032	cassetteExon	0.5	100	100	ENSMUST00000109936.3	ENSMUSG00000021097.16	Clmn	chr12	protein_coding	calmin
chr12	104740808;104742187	104742107;104743204	-	104740808	104743204	cassetteExon	0.5	100	100	ENSMUST00000109936.3	ENSMUSG00000021097.16	Clmn	chr12	protein_coding	calmin
chr12	104740157	104740748	-	104740102	104740748	A3SS	0.5	50	50	ENSMUST00000109936.3	ENSMUSG00000021097.16	Clmn	chr12	protein_coding	calmin
chr12	104770929	104825901	-	104770929	104831129	A5SS	0.5	50	50	ENSMUST00000109936.3	ENSMUSG00000021097.16	Clmn	chr12	protein_coding	calmin
chr12	104831756	104837331	+	104825280	104837331	A5SS	0.5	50	50	ENSMUST00000222624.2	ENSMUSG00000021101.3	4930408O17Rik	chr12	lncRNA	RIKEN cDNA 4930408O17 gene
chr12	104934450;104935632	104935460;104941997	-	104934450	104941997	cassetteExon	0.5	100	100	ENSMUST00000067005.11	ENSMUSG00000054150.13	Syne3	chr12	protein_coding	spectrin repeat containing, nuclear envelope family member 3
chr12	104942154	104963730	-	104942154	104975973	A5SS	0.5	50	50	ENSMUST00000067005.11	ENSMUSG00000054150.13	Syne3	chr12	protein_coding	spectrin repeat containing, nuclear envelope family member 3
chr12	104997084	104998334	-	104997084	104998219	A5SS	0.5	50	50	ENSMUST00000222812.2	ENSMUSG00000113722.2	Snhg10	chr12	lncRNA	small nucleolar RNA host gene 10
chr12	104999241	105006534	+	104999241	105004383	3pMXE	0.5	50	50	ENSMUST00000223244.2	ENSMUSG00000021102.5	Glrx5	chr12	protein_coding	glutaredoxin 5
chr12	105001731	105006534	+	104999241	105006534	A5SS	0.5	50	50	ENSMUST00000021522.5	ENSMUSG00000021102.5	Glrx5	chr12	protein_coding	glutaredoxin 5
chr12	105120423	105120889	+	105120362	105120889	A5SS	0.5	50	50	ENSMUST00000142230.8	ENSMUSG00000060863.13	Tcl1b2	chr12	protein_coding	T cell leukemia/lymphoma 1B, 2
chr12	105130824	105132292	+	105130824;105131798	105131729;105132292	ES	0.5	50	50	ENSMUST00000085043.7	ENSMUSG00000066359.7	Tcl1b1	chr12	protein_coding	T cell leukemia/lymphoma 1B, 1
chr12	105172180	105172667	+	105172151	105172667	A5SS	0.5	50	50	ENSMUST00000222867.2	ENSMUSG00000079007.5	Tcl1b4	chr12	protein_coding	T cell leukemia/lymphoma 1B, 4
chr12	105183960	105184918	-	105183960;105184551	105184482;105184918	ES	0.5	50	50	ENSMUST00000041316.15	ENSMUSG00000041359.15	Tcl1	chr12	protein_coding	T cell lymphoma breakpoint 1
chr12	105184551	105188792	-	105184551;105185088	105184918;105188792	ES	0.5	50	50	ENSMUST00000041316.15	ENSMUSG00000041359.15	Tcl1	chr12	protein_coding	T cell lymphoma breakpoint 1
chr12	105184551	105184967	-	105184551	105184918	A5SS	0.33	50	50	ENSMUST00000041316.15	ENSMUSG00000041359.15	Tcl1	chr12	protein_coding	T cell lymphoma breakpoint 1
chr12	105185088	105188767	-	105185088	105188792	A5SS	0.5	50	50	ENSMUST00000041316.15	ENSMUSG00000041359.15	Tcl1	chr12	protein_coding	T cell lymphoma breakpoint 1
chr12	105183960;105184551	105184482;105188792	-	105183960;105185088	105184918;105188792	MXE	0.5	100	100	ENSMUST00000101071.4	ENSMUSG00000041359.15	Tcl1	chr12	protein_coding	T cell lymphoma breakpoint 1
chr12	105184551	105188792	-	105184551;105185088	105184967;105188792	ES	0.5	50	50	ENSMUST00000176579.2	ENSMUSG00000041359.15	Tcl1	chr12	protein_coding	T cell lymphoma breakpoint 1
chr12	105183960	105184918	-	105183960	105184482	A5SS&ES	0.5	50	50	ENSMUST00000176579.2	ENSMUSG00000041359.15	Tcl1	chr12	protein_coding	T cell lymphoma breakpoint 1
chr12	105184551	105188792	-	105185088	105188792	A3SS&ES	0.5	50	50	ENSMUST00000177521.2	ENSMUSG00000041359.15	Tcl1	chr12	protein_coding	T cell lymphoma breakpoint 1
chr12	105303367	105303489	+	105303216	105303489	A5SS	0.5	50	50	ENSMUST00000180458.9	ENSMUSG00000097929.10	Tunar	chr12	protein_coding	Tcl1 upstream neural differentiation associated RNA
chr12	105364334	105369850	-	105364334	105369958	A5SS	0.5	50	50	ENSMUST00000222380.2	ENSMUSG00000113314.2	Gm2721	chr12	lncRNA	predicted gene 2721
chr12	105569440	105570426	+	105569440	105570383	A3SS	0.5	50	50	ENSMUST00000182899.2	ENSMUSG00000041347.6	Bdkrb1	chr12	protein_coding	bradykinin receptor, beta 1
chr12	105602811	105604170	-	105602814	105604170	A3SS	0.5	50	50	ENSMUST00000221015.2	ENSMUSG00000041341.11	Atg2b	chr12	protein_coding	autophagy related 2B
chr12	105589087	105589258	-	105589087	105589680	A5SS	0.5	50	50	ENSMUST00000221015.2	ENSMUSG00000041341.11	Atg2b	chr12	protein_coding	autophagy related 2B
chr12	105651717	105655621	+	105651717	105664977	A3SS	0.5	50	50	ENSMUST00000222284.2	ENSMUSG00000044715.8	Gskip	chr12	protein_coding	GSK3B interacting protein
chr12	105685248	105692446	+	105682338	105692446	A5SS	0.5	50	50	ENSMUST00000040876.7	ENSMUSG00000041323.7	Ak7	chr12	protein_coding	adenylate kinase 7
chr12	105766083	105771186	+	105766083;105767009	105766943;105771186	ES	0.33	50	50	ENSMUST00000109901.9	ENSMUSG00000021111.16	Papola	chr12	protein_coding	poly (A) polymerase alpha
chr12	105773477	105775602	+	105773477;105774925	105774814;105775602	ES	0.5	50	50	ENSMUST00000109901.9	ENSMUSG00000021111.16	Papola	chr12	protein_coding	poly (A) polymerase alpha
chr12	105774925	105775783	+	105774925;105775691	105775602;105775783	ES	0.5	50	50	ENSMUST00000109901.9	ENSMUSG00000021111.16	Papola	chr12	protein_coding	poly (A) polymerase alpha
chr12	105775921	105778533	+	105775921;105777368	105777296;105778533	ES	0.5	50	50	ENSMUST00000109901.9	ENSMUSG00000021111.16	Papola	chr12	protein_coding	poly (A) polymerase alpha
chr12	105795536	105800969	+	105795536;105799421	105799359;105800969	ES	0.5	50	50	ENSMUST00000109901.9	ENSMUSG00000021111.16	Papola	chr12	protein_coding	poly (A) polymerase alpha
chr12	105793345	105794543	+	105793345	105794540	A3SS	0.5	50	50	ENSMUST00000109901.9	ENSMUSG00000021111.16	Papola	chr12	protein_coding	poly (A) polymerase alpha
chr12	105801043	105801422	+	105801043	105803024	A3SS	0.5	50	50	ENSMUST00000109901.9	ENSMUSG00000021111.16	Papola	chr12	protein_coding	poly (A) polymerase alpha
chr12	105751072	105765910	+	105751173	105765910	A5SS	0.5	50	50	ENSMUST00000109901.9	ENSMUSG00000021111.16	Papola	chr12	protein_coding	poly (A) polymerase alpha
chr12	105801016	105803024	+	105801043	105803024	A5SS	0.33	50	50	ENSMUST00000109901.9	ENSMUSG00000021111.16	Papola	chr12	protein_coding	poly (A) polymerase alpha
chr12	105773477;105775691	105775602;105775783	+	105773477;105774925	105774814;105775783	MXE	0.5	100	100	ENSMUST00000172040.8	ENSMUSG00000021111.16	Papola	chr12	protein_coding	poly (A) polymerase alpha
chr12	105751173	105771186	+	105767009	105771186	A5SS&ES	0.33	50	50	ENSMUST00000172040.8	ENSMUSG00000021111.16	Papola	chr12	protein_coding	poly (A) polymerase alpha
chr12	105795536;105801016	105800969;105803024	+	105795536	105803024	cassetteExon	0.5	100	100	ENSMUST00000163473.8	ENSMUSG00000021111.16	Papola	chr12	protein_coding	poly (A) polymerase alpha
chr12	105795536;105801043	105800969;105803024	+	105795536	105803024	cassetteExon	0.5	100	100	ENSMUST00000163473.8	ENSMUSG00000021111.16	Papola	chr12	protein_coding	poly (A) polymerase alpha
chr12	105795536	105799359	+	105795536	105803024	A3SS	0.33	50	50	ENSMUST00000163473.8	ENSMUSG00000021111.16	Papola	chr12	protein_coding	poly (A) polymerase alpha
chr12	105771267	105772746	+	105771267	105774814	A3SS	0.5	50	50	ENSMUST00000166329.8	ENSMUSG00000021111.16	Papola	chr12	protein_coding	poly (A) polymerase alpha
chr12	105773477	105774814	+	105771267	105774814	A5SS	0.5	50	50	ENSMUST00000166329.8	ENSMUSG00000021111.16	Papola	chr12	protein_coding	poly (A) polymerase alpha
chr12	105773477	105775602	+	105774925	105775602	A5SS&ES	0.5	50	50	ENSMUST00000166329.8	ENSMUSG00000021111.16	Papola	chr12	protein_coding	poly (A) polymerase alpha
chr12	105751173;105766083	105765910;105771186	+	105751173	105771186	cassetteExon	0.5	100	100	ENSMUST00000165584.8	ENSMUSG00000021111.16	Papola	chr12	protein_coding	poly (A) polymerase alpha
chr12	105771267;105774925	105774814;105775602	+	105771267;105773477	105772746;105775602	MXE	0.5	100	100	ENSMUST00000169938.8	ENSMUSG00000021111.16	Papola	chr12	protein_coding	poly (A) polymerase alpha
chr12	105771267;105774925	105774814;105775783	+	105771267;105775691	105772746;105775783	MXE	0.5	100	100	ENSMUST00000169938.8	ENSMUSG00000021111.16	Papola	chr12	protein_coding	poly (A) polymerase alpha
chr12	105775921	105778533	+	105775921	105777296	3pMXE	0.5	50	50	ENSMUST00000163805.2	ENSMUSG00000021111.16	Papola	chr12	protein_coding	poly (A) polymerase alpha
chr12	105774925	105775783	+	105775691	105775783	5pMXE	0.5	50	50	ENSMUST00000170831.2	ENSMUSG00000021111.16	Papola	chr12	protein_coding	poly (A) polymerase alpha
chr12	106036874;106039937	106039878;106041266	+	106036874	106041266	cassetteExon	0.5	100	100	ENSMUST00000072040.7	ENSMUSG00000021115.16	Vrk1	chr12	protein_coding	vaccinia related kinase 1
chr12	106036874	106037829	+	106036874	106041266	A3SS	0.33	50	50	ENSMUST00000072040.7	ENSMUSG00000021115.16	Vrk1	chr12	protein_coding	vaccinia related kinase 1
chr12	105992308	106002799	+	105976617	106002799	A5SS	0.33	50	50	ENSMUST00000072040.7	ENSMUSG00000021115.16	Vrk1	chr12	protein_coding	vaccinia related kinase 1
chr12	105997053	106002799	+	105976617	106002799	A5SS	0.33	50	50	ENSMUST00000072040.7	ENSMUSG00000021115.16	Vrk1	chr12	protein_coding	vaccinia related kinase 1
chr12	106036874	106039878	+	106037900	106039878	A5SS	0.5	50	50	ENSMUST00000221312.2	ENSMUSG00000021115.16	Vrk1	chr12	protein_coding	vaccinia related kinase 1
chr12	106036874	106041266	+	106039937	106041266	A5SS&ES	0.5	50	50	ENSMUST00000221312.2	ENSMUSG00000021115.16	Vrk1	chr12	protein_coding	vaccinia related kinase 1
chr12	106036874;106037900	106037829;106039878	+	106036874	106039878	cassetteExon	0.5	100	100	ENSMUST00000085026.12	ENSMUSG00000021115.16	Vrk1	chr12	protein_coding	vaccinia related kinase 1
chr12	105997053	106002799	+	105992308	106002799	A5SS	0.33	50	50	ENSMUST00000221485.2	ENSMUSG00000021115.16	Vrk1	chr12	protein_coding	vaccinia related kinase 1
chr12	106680509	106682420	-	106680509;106680843	106680738;106682420	ES	0.5	50	50	ENSMUST00000135423.8	ENSMUSG00000085820.8	4933406K04Rik	chr12	lncRNA	RIKEN cDNA 4933406K04 gene
chr12	106673128	106675722	-	106662402	106675722	A3SS	0.5	50	50	ENSMUST00000135423.8	ENSMUSG00000085820.8	4933406K04Rik	chr12	lncRNA	RIKEN cDNA 4933406K04 gene
chr12	107696098	107701694	-	107696098	107701708	A5SS	0.5	50	50	ENSMUST00000130564.2	ENSMUSG00000085641.2	4930465M20Rik	chr12	lncRNA	RIKEN cDNA 4930465M20 gene
chr12	107883673	107955724	-	107883673;107932146	107931931;107955724	ES	0.5	50	50	ENSMUST00000066060.11	ENSMUSG00000048251.16	Bcl11b	chr12	protein_coding	B cell leukemia/lymphoma 11B
chr12	107883673;107956089	107955724;107969345	-	107883673	107969345	cassetteExon	0.5	100	100	ENSMUST00000109887.8	ENSMUSG00000048251.16	Bcl11b	chr12	protein_coding	B cell leukemia/lymphoma 11B
chr12	107883673	107931931	-	107883673	107969345	A5SS	0.33	50	50	ENSMUST00000109887.8	ENSMUSG00000048251.16	Bcl11b	chr12	protein_coding	B cell leukemia/lymphoma 11B
chr12	108124607	108129232	-	108124607;108126640	108126492;108129232	ES	0.33	50	50	ENSMUST00000071095.14	ENSMUSG00000056770.16	Setd3	chr12	protein_coding	SET domain containing 3
chr12	108131431;108133654	108133532;108145412	-	108131431	108145412	cassetteExon	0.5	100	100	ENSMUST00000071095.14	ENSMUSG00000056770.16	Setd3	chr12	protein_coding	SET domain containing 3
chr12	108079652	108081025	-	108079652	108084501	A5SS	0.33	50	50	ENSMUST00000071095.14	ENSMUSG00000056770.16	Setd3	chr12	protein_coding	SET domain containing 3
chr12	108085423	108124013	-	108079652	108124013	A3SS	0.5	50	50	ENSMUST00000132682.8	ENSMUSG00000056770.16	Setd3	chr12	protein_coding	SET domain containing 3
chr12	108085423	108129232	-	108124607	108129232	A3SS&ES	0.33	50	50	ENSMUST00000132682.8	ENSMUSG00000056770.16	Setd3	chr12	protein_coding	SET domain containing 3
chr12	108079652	108081025	-	108079652	108124013	A5SS	0.33	50	50	ENSMUST00000132682.8	ENSMUSG00000056770.16	Setd3	chr12	protein_coding	SET domain containing 3
chr12	108079652	108084501	-	108079652	108124013	A5SS	0.33	50	50	ENSMUST00000132682.8	ENSMUSG00000056770.16	Setd3	chr12	protein_coding	SET domain containing 3
chr12	108126640	108129232	-	108085423	108129232	A3SS	0.33	50	50	ENSMUST00000169951.2	ENSMUSG00000056770.16	Setd3	chr12	protein_coding	SET domain containing 3
chr12	108085423	108124013	-	108085423	108129232	A5SS	0.5	50	50	ENSMUST00000169951.2	ENSMUSG00000056770.16	Setd3	chr12	protein_coding	SET domain containing 3
chr12	108177881;108183084	108183046;108187968	-	108177881	108187968	cassetteExon	0.5	100	100	ENSMUST00000222310.2	ENSMUSG00000084883.3	Ccdc85c	chr12	protein_coding	coiled-coil domain containing 85C
chr12	108288143	108292441	+	108288143	108293385	A3SS	0.5	50	50	ENSMUST00000021685.8	ENSMUSG00000021260.9	Hhipl1	chr12	protein_coding	hedgehog interacting protein-like 1
chr12	108318678	108319033	+	108318283	108319033	A5SS	0.5	50	50	ENSMUST00000021684.6	ENSMUSG00000021259.6	Cyp46a1	chr12	protein_coding	cytochrome P450, family 46, subfamily a, polypeptide 1
chr12	108468677	108472738	+	108468677;108469492	108469442;108472738	ES	0.5	50	50	ENSMUST00000138456.8	ENSMUSG00000058070.15	Eml1	chr12	protein_coding	echinoderm microtubule associated protein like 1
chr12	108376954	108429786	+	108337611	108429786	A5SS	0.33	50	50	ENSMUST00000138456.8	ENSMUSG00000058070.15	Eml1	chr12	protein_coding	echinoderm microtubule associated protein like 1
chr12	108389520	108429786	+	108337611	108429786	A5SS	0.33	50	50	ENSMUST00000138456.8	ENSMUSG00000058070.15	Eml1	chr12	protein_coding	echinoderm microtubule associated protein like 1
chr12	108501211	108503593	+	108501211;108502581	108502486;108503593	ES	0.5	50	50	ENSMUST00000054955.14	ENSMUSG00000058070.15	Eml1	chr12	protein_coding	echinoderm microtubule associated protein like 1
chr12	108389520	108429786	+	108376954	108429786	A5SS	0.33	50	50	ENSMUST00000054955.14	ENSMUSG00000058070.15	Eml1	chr12	protein_coding	echinoderm microtubule associated protein like 1
chr12	108500999	108501124	+	108501010	108501124	A5SS	0.5	50	50	ENSMUST00000054955.14	ENSMUSG00000058070.15	Eml1	chr12	protein_coding	echinoderm microtubule associated protein like 1
chr12	108503782;108505565	108505513;108505657	-	108503782	108505657	cassetteExon	0.5	100	100	ENSMUST00000223178.2	ENSMUSG00000097788.3	Gm16596	chr12	lncRNA	predicted gene, 16596
chr12	108505732;108506897	108506840;108521638	-	108505732	108521638	cassetteExon	0.5	100	100	ENSMUST00000223178.2	ENSMUSG00000097788.3	Gm16596	chr12	lncRNA	predicted gene, 16596
chr12	108505732	108506840	-	108505729	108506840	A3SS	0.5	50	50	ENSMUST00000180576.3	ENSMUSG00000097788.3	Gm16596	chr12	lncRNA	predicted gene, 16596
chr12	108505732	108521638	-	108506897	108521638	A3SS&ES	0.5	50	50	ENSMUST00000180576.3	ENSMUSG00000097788.3	Gm16596	chr12	lncRNA	predicted gene, 16596
chr12	108649520;108649669	108649607;108652309	+	108649520	108652309	cassetteExon	0.5	100	100	ENSMUST00000077735.13	ENSMUSG00000021262.16	Evl	chr12	protein_coding	Ena-vasodilator stimulated phosphoprotein
chr12	108652375	108652664	+	108652375	108652667	A3SS	0.5	50	50	ENSMUST00000077735.13	ENSMUSG00000021262.16	Evl	chr12	protein_coding	Ena-vasodilator stimulated phosphoprotein
chr12	108572270	108614574	+	108521472	108614574	A5SS	0.25	50	50	ENSMUST00000077735.13	ENSMUSG00000021262.16	Evl	chr12	protein_coding	Ena-vasodilator stimulated phosphoprotein
chr12	108602143	108614574	+	108521472	108614574	A5SS	0.25	50	50	ENSMUST00000077735.13	ENSMUSG00000021262.16	Evl	chr12	protein_coding	Ena-vasodilator stimulated phosphoprotein
chr12	108602643	108614574	+	108521472	108614574	A5SS	0.25	50	50	ENSMUST00000077735.13	ENSMUSG00000021262.16	Evl	chr12	protein_coding	Ena-vasodilator stimulated phosphoprotein
chr12	108602143	108614574	+	108572270	108614574	A5SS	0.25	50	50	ENSMUST00000109854.9	ENSMUSG00000021262.16	Evl	chr12	protein_coding	Ena-vasodilator stimulated phosphoprotein
chr12	108602643	108614574	+	108572270	108614574	A5SS	0.25	50	50	ENSMUST00000109854.9	ENSMUSG00000021262.16	Evl	chr12	protein_coding	Ena-vasodilator stimulated phosphoprotein
chr12	108602143;108602643	108602508;108614574	+	108602143	108614574	cassetteExon	0.5	100	100	ENSMUST00000223109.2	ENSMUSG00000021262.16	Evl	chr12	protein_coding	Ena-vasodilator stimulated phosphoprotein
chr12	108649520	108652309	+	108649669	108652309	A5SS	0.5	50	50	ENSMUST00000222048.2	ENSMUSG00000021262.16	Evl	chr12	protein_coding	Ena-vasodilator stimulated phosphoprotein
chr12	108655346	108658153	-	108645416	108658153	A3SS	0.33	50	50	ENSMUST00000222255.2	ENSMUSG00000021263.12	Degs2	chr12	protein_coding	delta(4)-desaturase, sphingolipid 2
chr12	108656869	108658153	-	108645416	108658153	A3SS	0.33	50	50	ENSMUST00000222255.2	ENSMUSG00000021263.12	Degs2	chr12	protein_coding	delta(4)-desaturase, sphingolipid 2
chr12	108656869	108658153	-	108655346	108658153	A3SS	0.33	50	50	ENSMUST00000167978.9	ENSMUSG00000021263.12	Degs2	chr12	protein_coding	delta(4)-desaturase, sphingolipid 2
chr12	108803476	108819275	+	108802569	108819275	A5SS	0.33	50	50	ENSMUST00000223296.2	ENSMUSG00000048856.10	Slc25a47	chr12	protein_coding	solute carrier family 25, member 47
chr12	108817133	108819275	+	108802569	108819275	A5SS	0.33	50	50	ENSMUST00000223296.2	ENSMUSG00000048856.10	Slc25a47	chr12	protein_coding	solute carrier family 25, member 47
chr12	108817133	108819275	+	108803476	108819275	A5SS	0.33	50	50	ENSMUST00000221787.2	ENSMUSG00000048856.10	Slc25a47	chr12	protein_coding	solute carrier family 25, member 47
chr12	108854474	108859995	-	108854474	108859086	5pMXE	0.5	50	50	ENSMUST00000161410.8	ENSMUSG00000021266.17	Wars	chr12	protein_coding	tryptophanyl-tRNA synthetase
chr12	108848834;108850274	108850191;108854302	-	108848834	108854302	cassetteExon	0.5	100	100	ENSMUST00000161410.8	ENSMUSG00000021266.17	Wars	chr12	protein_coding	tryptophanyl-tRNA synthetase
chr12	108848834	108854238	-	108848834	108854302	A5SS	0.33	50	50	ENSMUST00000161410.8	ENSMUSG00000021266.17	Wars	chr12	protein_coding	tryptophanyl-tRNA synthetase
chr12	108848834	108854238	-	108848834	108850191	A5SS&ES	0.33	50	50	ENSMUST00000160477.8	ENSMUSG00000021266.17	Wars	chr12	protein_coding	tryptophanyl-tRNA synthetase
chr12	108860239	108863835	+	108859678	108863835	A5SS	0.25	50	50	ENSMUST00000221377.2	ENSMUSG00000040877.17	Wdr25	chr12	protein_coding	WD repeat domain 25
chr12	108860256	108863835	+	108859678	108863835	A5SS	0.25	50	50	ENSMUST00000221377.2	ENSMUSG00000040877.17	Wdr25	chr12	protein_coding	WD repeat domain 25
chr12	108862985	108863835	+	108859678	108863835	A5SS	0.25	50	50	ENSMUST00000221377.2	ENSMUSG00000040877.17	Wdr25	chr12	protein_coding	WD repeat domain 25
chr12	108860239	108863835	+	108860256	108863835	A5SS	0.25	50	50	ENSMUST00000220667.2	ENSMUSG00000040877.17	Wdr25	chr12	protein_coding	WD repeat domain 25
chr12	108862985	108863835	+	108860256	108863835	A5SS	0.25	50	50	ENSMUST00000220667.2	ENSMUSG00000040877.17	Wdr25	chr12	protein_coding	WD repeat domain 25
chr12	108862985	108863835	+	108860239	108863835	A5SS	0.25	50	50	ENSMUST00000167816.8	ENSMUSG00000040877.17	Wdr25	chr12	protein_coding	WD repeat domain 25
chr12	108863932	108946617	+	108864651	108946617	A5SS	0.33	50	50	ENSMUST00000167816.8	ENSMUSG00000040877.17	Wdr25	chr12	protein_coding	WD repeat domain 25
chr12	108878842	108946617	+	108864651	108946617	A5SS	0.33	50	50	ENSMUST00000167816.8	ENSMUSG00000040877.17	Wdr25	chr12	protein_coding	WD repeat domain 25
chr12	108986812	108990889	+	108958863	108990889	A5SS	0.5	50	50	ENSMUST00000167816.8	ENSMUSG00000040877.17	Wdr25	chr12	protein_coding	WD repeat domain 25
chr12	108878842	108946617	+	108863932	108946617	A5SS	0.33	50	50	ENSMUST00000220495.2	ENSMUSG00000040877.17	Wdr25	chr12	protein_coding	WD repeat domain 25
chr12	109018788	109019183	-	109018788	109034052	A5SS	0.25	50	50	ENSMUST00000190647.3	ENSMUSG00000040867.14	Begain	chr12	protein_coding	brain-enriched guanylate kinase-associated
chr12	109018788	109019604	-	109018788	109034052	A5SS	0.25	50	50	ENSMUST00000190647.3	ENSMUSG00000040867.14	Begain	chr12	protein_coding	brain-enriched guanylate kinase-associated
chr12	109018788	109020090	-	109018788	109034052	A5SS	0.25	50	50	ENSMUST00000190647.3	ENSMUSG00000040867.14	Begain	chr12	protein_coding	brain-enriched guanylate kinase-associated
chr12	109018788	109020090	-	109018788	109019604	5pMXE	0.25	50	50	ENSMUST00000239108.2	ENSMUSG00000040867.14	Begain	chr12	protein_coding	brain-enriched guanylate kinase-associated
chr12	109018788	109019183	-	109018788	109019604	A5SS	0.25	50	50	ENSMUST00000239108.2	ENSMUSG00000040867.14	Begain	chr12	protein_coding	brain-enriched guanylate kinase-associated
chr12	109018788	109019183	-	109018788	109020090	A5SS	0.25	50	50	ENSMUST00000238841.2	ENSMUSG00000040867.14	Begain	chr12	protein_coding	brain-enriched guanylate kinase-associated
chr12	109425818	109425969	+	109425818	109426038	A3SS	0.25	50	50	ENSMUST00000109842.9	ENSMUSG00000040856.18	Dlk1	chr12	protein_coding	delta like non-canonical Notch ligand 1
chr12	109425818	109425972	+	109425818	109426038	A3SS	0.25	50	50	ENSMUST00000109842.9	ENSMUSG00000040856.18	Dlk1	chr12	protein_coding	delta like non-canonical Notch ligand 1
chr12	109425818	109426044	+	109425818	109426038	A3SS	0.25	50	50	ENSMUST00000109842.9	ENSMUSG00000040856.18	Dlk1	chr12	protein_coding	delta like non-canonical Notch ligand 1
chr12	109425758	109426038	+	109425818	109426038	A5SS	0.5	50	50	ENSMUST00000109842.9	ENSMUSG00000040856.18	Dlk1	chr12	protein_coding	delta like non-canonical Notch ligand 1
chr12	109425758	109426038	+	109425758	109426044	A3SS	0.5	50	50	ENSMUST00000109843.8	ENSMUSG00000040856.18	Dlk1	chr12	protein_coding	delta like non-canonical Notch ligand 1
chr12	109425818	109426044	+	109425758	109426044	A5SS	0.5	50	50	ENSMUST00000109843.8	ENSMUSG00000040856.18	Dlk1	chr12	protein_coding	delta like non-canonical Notch ligand 1
chr12	109425818	109425969	+	109425818	109425972	A3SS	0.25	50	50	ENSMUST00000109846.11	ENSMUSG00000040856.18	Dlk1	chr12	protein_coding	delta like non-canonical Notch ligand 1
chr12	109425818	109426044	+	109425818	109425972	A3SS	0.25	50	50	ENSMUST00000109846.11	ENSMUSG00000040856.18	Dlk1	chr12	protein_coding	delta like non-canonical Notch ligand 1
chr12	109425818	109425969	+	109425818	109426044	A3SS	0.25	50	50	ENSMUST00000173539.8	ENSMUSG00000040856.18	Dlk1	chr12	protein_coding	delta like non-canonical Notch ligand 1
chr12	109508220	109509583	+	109506982	109509583	A5SS	0.5	50	50	ENSMUST00000129245.8	ENSMUSG00000021268.18	Meg3	chr12	lncRNA	maternally expressed 3
chr12	109509732	109509910	+	109509688	109509910	A5SS	0.5	50	50	ENSMUST00000129245.8	ENSMUSG00000021268.18	Meg3	chr12	lncRNA	maternally expressed 3
chr12	109510625	109512313	+	109510625;109510924	109510831;109512313	ES	0.5	50	50	ENSMUST00000143836.8	ENSMUSG00000021268.18	Meg3	chr12	lncRNA	maternally expressed 3
chr12	109512425	109515914	+	109512425;109515806	109515726;109515914	ES	0.5	50	50	ENSMUST00000143836.8	ENSMUSG00000021268.18	Meg3	chr12	lncRNA	maternally expressed 3
chr12	109512425	109515954	+	109512425	109515726	A3SS&ES	0.33	50	50	ENSMUST00000143836.8	ENSMUSG00000021268.18	Meg3	chr12	lncRNA	maternally expressed 3
chr12	109524754	109525074	+	109524754	109537825	A3SS	0.5	50	50	ENSMUST00000143836.8	ENSMUSG00000021268.18	Meg3	chr12	lncRNA	maternally expressed 3
chr12	109512425	109515954	+	109512425	109515914	A3SS	0.33	50	50	ENSMUST00000124106.8	ENSMUSG00000021268.18	Meg3	chr12	lncRNA	maternally expressed 3
chr12	109512425	109515914	+	109515806	109515914	5pMXE	0.5	50	50	ENSMUST00000128458.3	ENSMUSG00000021268.18	Meg3	chr12	lncRNA	maternally expressed 3
chr12	109570500	109573848	+	109570500;109572777	109572648;109573848	ES	0.33	50	50	ENSMUST00000238694.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593566	109604273	+	109593566;109601891	109601828;109604273	ES	0.33	50	50	ENSMUST00000238694.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109604360	109608999	+	109604360;109606762	109606701;109608999	ES	0.5	50	50	ENSMUST00000238694.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109606762	109609848	+	109606762;109609086	109608999;109609848	ES	0.33	50	50	ENSMUST00000238694.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109572777;109583783	109583645;109586747	+	109572777;109573930	109573848;109586747	MXE	0.5	100	100	ENSMUST00000238694.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109573930;109583783	109583608;109586747	+	109573930	109586747	cassetteExon	0.5	100	100	ENSMUST00000238694.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593566;109600788	109600710;109601828	+	109593566	109601828	cassetteExon	0.5	100	100	ENSMUST00000238694.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109609895;109611336	109611238;109611696	+	109609895	109611696	cassetteExon	0.5	100	100	ENSMUST00000238694.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109571735	109572648	+	109570500	109572648	A5SS	0.5	50	50	ENSMUST00000238694.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109572721	109573848	+	109572777	109573848	A5SS	0.33	50	50	ENSMUST00000238694.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109584706	109586747	+	109573930	109586747	A5SS	0.33	50	50	ENSMUST00000238694.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593587	109601828	+	109593566	109601828	A5SS	0.33	50	50	ENSMUST00000238694.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593587	109604273	+	109601891	109604273	A5SS&ES	0.33	50	50	ENSMUST00000238694.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593587	109606701	+	109604360	109606701	A5SS&ES	0.5	50	50	ENSMUST00000238694.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109604360	109609848	+	109604360;109606762	109606701;109609848	ES	0.33	50	50	ENSMUST00000238296.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109604360;109609086	109608999;109609848	+	109604360;109606762	109606701;109609848	MXE	0.5	100	100	ENSMUST00000238296.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593587	109604273	+	109593587;109601891	109601828;109604273	ES	0.33	50	50	ENSMUST00000238751.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109570500;109573930	109573848;109583608	+	109570500;109572775	109572648;109583608	MXE	0.5	100	100	ENSMUST00000238751.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109570500;109573930	109573848;109586747	+	109570500;109583783	109572648;109586747	MXE	0.5	100	100	ENSMUST00000238751.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593587;109600788	109600628;109601828	+	109593587	109601828	cassetteExon	0.5	100	100	ENSMUST00000238751.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593587;109600788	109600693;109601828	+	109593587	109601828	cassetteExon	0.5	100	100	ENSMUST00000238751.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109572775	109583645	+	109572775	109583608	A3SS	0.5	50	50	ENSMUST00000238751.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593587	109596455	+	109593587	109601828	A3SS	0.16	50	50	ENSMUST00000238751.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109576013	109583608	+	109572775	109583608	A5SS	0.25	50	50	ENSMUST00000238751.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109579687	109583608	+	109572775	109583608	A5SS	0.25	50	50	ENSMUST00000238751.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109584706	109586747	+	109583783	109586747	A5SS	0.33	50	50	ENSMUST00000238751.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593566	109604273	+	109601891	109604273	A5SS&ES	0.33	50	50	ENSMUST00000238751.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109572777	109583645	+	109572775	109583645	A5SS	0.5	50	50	ENSMUST00000182119.3	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109604360;109609895	109609848;109611696	+	109604360	109611696	cassetteExon	0.5	100	100	ENSMUST00000183215.8	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593587	109596455	+	109593587	109604273	A3SS	0.16	50	50	ENSMUST00000183215.8	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593587	109600628	+	109593587	109604273	A3SS	0.16	50	50	ENSMUST00000183215.8	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593587	109600693	+	109593587	109604273	A3SS	0.16	50	50	ENSMUST00000183215.8	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593587	109606701	+	109593587	109604273	A3SS&ES	0.16	50	50	ENSMUST00000183215.8	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109604360	109606701	+	109604360	109611696	A3SS	0.25	50	50	ENSMUST00000183215.8	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109604360	109608999	+	109604360	109611696	A3SS	0.25	50	50	ENSMUST00000183215.8	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593566	109604273	+	109593587	109604273	A5SS	0.33	50	50	ENSMUST00000183215.8	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109611336	109611696	+	109604360	109611696	A5SS	0.33	50	50	ENSMUST00000183215.8	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593587	109601828	+	109600788	109601828	A5SS&ES	0.33	50	50	ENSMUST00000238716.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109622368	109624487	+	109622368;109623274	109623222;109624487	ES	0.33	50	50	ENSMUST00000238468.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109615676;109615809	109615761;109616506	+	109615676	109616506	cassetteExon	0.5	100	100	ENSMUST00000238468.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109618372;109619149	109619135;109620720	+	109618372	109620720	cassetteExon	0.5	100	100	ENSMUST00000238468.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593587	109596455	+	109593587	109600693	A3SS	0.16	50	50	ENSMUST00000238468.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593587	109600628	+	109593587	109600693	A3SS	0.16	50	50	ENSMUST00000238468.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109612360	109615607	+	109612360	109613041	A3SS&ES	0.5	50	50	ENSMUST00000238468.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109616591	109617275	+	109616591	109617447	A3SS	0.5	50	50	ENSMUST00000238468.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109623274	109624492	+	109623274	109624487	A3SS	0.5	50	50	ENSMUST00000238468.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109626241	109627142	+	109626241	109627180	A3SS	0.5	50	50	ENSMUST00000238468.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593566	109601828	+	109600788	109601828	A5SS&ES	0.33	50	50	ENSMUST00000238468.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109616589	109617447	+	109616591	109617447	A5SS	0.5	50	50	ENSMUST00000238468.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109623265	109624487	+	109623274	109624487	A5SS	0.33	50	50	ENSMUST00000238468.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593587;109606762	109606701;109609848	+	109593587;109604360	109601828;109609848	MXE	0.5	100	100	ENSMUST00000238636.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109604360;109609086	109608999;109609848	+	109604360	109609848	cassetteExon	0.5	100	100	ENSMUST00000238636.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593587;109596625	109596455;109600628	+	109593587	109600628	cassetteExon	0.5	100	100	ENSMUST00000238248.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109570500;109572721	109572648;109573848	+	109570500	109573848	cassetteExon	0.5	100	100	ENSMUST00000182689.8	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109572777	109583645	+	109572777	109573848	A3SS&ES	0.5	50	50	ENSMUST00000238385.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593566	109600710	+	109593566	109604273	A3SS	0.33	50	50	ENSMUST00000238385.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109572775	109583608	+	109573930	109583608	A5SS&ES	0.25	50	50	ENSMUST00000238385.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109576013	109583608	+	109573930	109583608	A5SS	0.25	50	50	ENSMUST00000238385.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109579687	109583608	+	109573930	109583608	A5SS	0.25	50	50	ENSMUST00000238385.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109570500	109573848	+	109572721	109573848	5pMXE	0.33	50	50	ENSMUST00000238720.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593587;109606762	109606701;109608999	+	109593587;109604360	109604273;109608999	MXE	0.5	100	100	ENSMUST00000238576.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593587;109606762	109606701;109609848	+	109593587;109609086	109604273;109609848	MXE	0.5	100	100	ENSMUST00000238576.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109579687	109583608	+	109576013	109583608	A5SS	0.25	50	50	ENSMUST00000238576.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109573930	109586747	+	109583783	109586747	5pMXE	0.33	50	50	ENSMUST00000238430.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593587;109604360	109604273;109606701	+	109593587	109606701	cassetteExon	0.5	100	100	ENSMUST00000182100.9	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593587;109604360	109604273;109609848	+	109593587;109609086	109606701;109609848	MXE	0.5	100	100	ENSMUST00000182100.9	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593587;109604360	109604273;109611696	+	109593587;109609895	109606701;109611696	MXE	0.5	100	100	ENSMUST00000182100.9	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593587	109596455	+	109593587	109606701	A3SS	0.16	50	50	ENSMUST00000182100.9	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593587	109600628	+	109593587	109606701	A3SS	0.16	50	50	ENSMUST00000182100.9	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593587	109600693	+	109593587	109606701	A3SS	0.16	50	50	ENSMUST00000182100.9	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109593587	109601828	+	109593587	109606701	A3SS	0.16	50	50	ENSMUST00000182100.9	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109622368	109624487	+	109622368	109623222	3pMXE	0.5	50	50	ENSMUST00000238554.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109604360	109608999	+	109604360	109606701	3pMXE	0.25	50	50	ENSMUST00000183191.3	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109604360	109609848	+	109604360	109606701	3pMXE	0.25	50	50	ENSMUST00000183191.3	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109604360	109609848	+	109604360	109608999	A3SS	0.25	50	50	ENSMUST00000238303.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109604360	109608999	+	109606762	109608999	5pMXE	0.5	50	50	ENSMUST00000238538.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109604360	109609848	+	109609086	109609848	5pMXE	0.33	50	50	ENSMUST00000238650.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109606762	109609848	+	109609086	109609848	5pMXE	0.33	50	50	ENSMUST00000238650.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109604360	109611696	+	109609895	109611696	5pMXE	0.33	50	50	ENSMUST00000238689.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109609895	109611696	+	109611336	109611696	5pMXE	0.33	50	50	ENSMUST00000238507.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109622368	109624487	+	109622368;109623265	109623222;109624487	ES	0.33	50	50	ENSMUST00000238333.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109623265	109624492	+	109623265	109624487	A3SS	0.5	50	50	ENSMUST00000238333.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109618372	109620720	+	109618372	109619135	A3SS&ES	0.5	50	50	ENSMUST00000238341.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109619149	109620720	+	109619149	109620736	A3SS	0.5	50	50	ENSMUST00000238341.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109615676	109616506	+	109615676	109615761	3pMXE	0.5	50	50	ENSMUST00000238740.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109623274	109624492	+	109623265	109624492	A5SS	0.5	50	50	ENSMUST00000182088.9	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109622368	109624487	+	109623274	109624487	5pMXE	0.33	50	50	ENSMUST00000238532.2	ENSMUSG00000097451.12	Rian	chr12	lncRNA	RNA imprinted and accumulated in nucleus
chr12	109649294	109650133	+	109649294;109649961	109649865;109650133	ES	0.5	50	50	ENSMUST00000239068.2	ENSMUSG00000098202.3	B830012L14Rik	chr12	lncRNA	RIKEN cDNA B830012L14 gene
chr12	109650212	109651039	+	109650212	109651041	A3SS	0.5	50	50	ENSMUST00000239068.2	ENSMUSG00000098202.3	B830012L14Rik	chr12	lncRNA	RIKEN cDNA B830012L14 gene
chr12	109708724	109710100	+	109708724;109709852	109709791;109710100	ES	0.5	50	50	ENSMUST00000183144.8	ENSMUSG00000097391.9	Mirg	chr12	lncRNA	miRNA containing gene
chr12	109714727;109715443	109715390;109715529	+	109714727	109715529	cassetteExon	0.5	100	100	ENSMUST00000183144.8	ENSMUSG00000097391.9	Mirg	chr12	lncRNA	miRNA containing gene
chr12	109696297	109696525	+	109696297	109696547	A3SS	0.5	50	50	ENSMUST00000183144.8	ENSMUSG00000097391.9	Mirg	chr12	lncRNA	miRNA containing gene
chr12	109698346	109699927	+	109698346	109699715	A3SS	0.5	50	50	ENSMUST00000183144.8	ENSMUSG00000097391.9	Mirg	chr12	lncRNA	miRNA containing gene
chr12	109697562	109697676	+	109697537	109697676	A5SS	0.5	50	50	ENSMUST00000183144.8	ENSMUSG00000097391.9	Mirg	chr12	lncRNA	miRNA containing gene
chr12	109697784	109698151	+	109697789	109698151	A5SS	0.5	50	50	ENSMUST00000183144.8	ENSMUSG00000097391.9	Mirg	chr12	lncRNA	miRNA containing gene
chr12	109706197	109706380	+	109706197	109708124	A3SS	0.5	50	50	ENSMUST00000182499.8	ENSMUSG00000097391.9	Mirg	chr12	lncRNA	miRNA containing gene
chr12	110242011	110243060	-	110242011	110243904	A5SS	0.5	50	50	ENSMUST00000220800.2	ENSMUSG00000113581.2	Dio3os	chr12	lncRNA	deiodinase, iodothyronine type III, opposite strand
chr12	110242011;110244183	110243904;110244417	-	110242011;110243160	110243060;110244417	MXE	0.5	100	100	ENSMUST00000220793.2	ENSMUSG00000113581.2	Dio3os	chr12	lncRNA	deiodinase, iodothyronine type III, opposite strand
chr12	110243160	110244417	-	110244183	110244417	A3SS&ES	0.5	50	50	ENSMUST00000222401.2	ENSMUSG00000113581.2	Dio3os	chr12	lncRNA	deiodinase, iodothyronine type III, opposite strand
chr12	110414471	110432283	+	110414471	110415964	3pMXE	0.5	50	50	ENSMUST00000222276.2	ENSMUSG00000017843.15	Ppp2r5c	chr12	protein_coding	protein phosphatase 2, regulatory subunit B', gamma
chr12	110452386	110488925	+	110432454	110488925	A5SS	0.5	50	50	ENSMUST00000220509.2	ENSMUSG00000017843.15	Ppp2r5c	chr12	protein_coding	protein phosphatase 2, regulatory subunit B', gamma
chr12	110537202;110541295	110541179;110546835	+	110537202	110546835	cassetteExon	0.5	100	100	ENSMUST00000109832.3	ENSMUSG00000017843.15	Ppp2r5c	chr12	protein_coding	protein phosphatase 2, regulatory subunit B', gamma
chr12	110544602	110546835	+	110537202	110546835	A5SS	0.33	50	50	ENSMUST00000109832.3	ENSMUSG00000017843.15	Ppp2r5c	chr12	protein_coding	protein phosphatase 2, regulatory subunit B', gamma
chr12	110541295;110544602	110544535;110546835	+	110541295	110546835	cassetteExon	0.5	100	100	ENSMUST00000084985.11	ENSMUSG00000017843.15	Ppp2r5c	chr12	protein_coding	protein phosphatase 2, regulatory subunit B', gamma
chr12	110443435;110445057	110444794;110450470	-	110443435	110450470	cassetteExon	0.5	100	100	ENSMUST00000221514.2	ENSMUSG00000113585.2	Gm19605	chr12	lncRNA	predicted gene, 19605
chr12	110446060	110450470	-	110443435	110450470	A3SS	0.33	50	50	ENSMUST00000221514.2	ENSMUSG00000113585.2	Gm19605	chr12	lncRNA	predicted gene, 19605
chr12	110441354	110441819	-	110441354	110443005	A5SS	0.5	50	50	ENSMUST00000221514.2	ENSMUSG00000113585.2	Gm19605	chr12	lncRNA	predicted gene, 19605
chr12	110450641	110451989	-	110450641	110452568	A5SS	0.5	50	50	ENSMUST00000221514.2	ENSMUSG00000113585.2	Gm19605	chr12	lncRNA	predicted gene, 19605
chr12	110446060	110450470	-	110445057	110450470	A3SS	0.33	50	50	ENSMUST00000220603.2	ENSMUSG00000113585.2	Gm19605	chr12	lncRNA	predicted gene, 19605
chr12	110443435	110450470	-	110443435	110444794	5pMXE	0.5	50	50	ENSMUST00000221684.2	ENSMUSG00000113585.2	Gm19605	chr12	lncRNA	predicted gene, 19605
chr12	110443435	110450470	-	110445057	110450470	3pMXE	0.33	50	50	ENSMUST00000222803.2	ENSMUSG00000113585.2	Gm19605	chr12	lncRNA	predicted gene, 19605
chr12	110622065	110622719	+	110622065	110624276	A3SS	0.5	50	50	ENSMUST00000167395.2	ENSMUSG00000018707.14	Dync1h1	chr12	protein_coding	dynein cytoplasmic 1 heavy chain 1
chr12	110623630	110624276	+	110622065	110624276	A5SS	0.5	50	50	ENSMUST00000167395.2	ENSMUSG00000018707.14	Dync1h1	chr12	protein_coding	dynein cytoplasmic 1 heavy chain 1
chr12	110637284	110638617	-	110637320	110638617	A3SS	0.5	50	50	ENSMUST00000070659.7	ENSMUSG00000056508.7	1700001K19Rik	chr12	protein_coding	RIKEN cDNA 1700001K19 gene
chr12	110662114	110669057	-	110662114	110662686	5pMXE	0.25	50	50	ENSMUST00000094361.11	ENSMUSG00000021270.14	Hsp90aa1	chr12	protein_coding	heat shock protein 90, alpha (cytosolic), class A member 1
chr12	110662114;110662214	110662200;110662686	-	110662114	110662686	cassetteExon	0.5	100	100	ENSMUST00000094361.11	ENSMUSG00000021270.14	Hsp90aa1	chr12	protein_coding	heat shock protein 90, alpha (cytosolic), class A member 1
chr12	110662114	110662577	-	110662114	110662686	A5SS	0.25	50	50	ENSMUST00000094361.11	ENSMUSG00000021270.14	Hsp90aa1	chr12	protein_coding	heat shock protein 90, alpha (cytosolic), class A member 1
chr12	110662114	110662686	-	110662214	110662686	A3SS	0.5	50	50	ENSMUST00000021698.13	ENSMUSG00000021270.14	Hsp90aa1	chr12	protein_coding	heat shock protein 90, alpha (cytosolic), class A member 1
chr12	110662114	110662200	-	110662114	110669057	A5SS	0.25	50	50	ENSMUST00000155242.8	ENSMUSG00000021270.14	Hsp90aa1	chr12	protein_coding	heat shock protein 90, alpha (cytosolic), class A member 1
chr12	110662114	110662577	-	110662114	110669057	A5SS	0.25	50	50	ENSMUST00000155242.8	ENSMUSG00000021270.14	Hsp90aa1	chr12	protein_coding	heat shock protein 90, alpha (cytosolic), class A member 1
chr12	110662114	110662200	-	110662114	110662577	A5SS	0.25	50	50	ENSMUST00000124156.8	ENSMUSG00000021270.14	Hsp90aa1	chr12	protein_coding	heat shock protein 90, alpha (cytosolic), class A member 1
chr12	110662114	110662686	-	110662114	110662200	5pMXE	0.25	50	50	ENSMUST00000149189.2	ENSMUSG00000021270.14	Hsp90aa1	chr12	protein_coding	heat shock protein 90, alpha (cytosolic), class A member 1
chr12	110704711	110708564	+	110704711	110745730	A3SS	0.5	50	50	ENSMUST00000193053.6	ENSMUSG00000037957.15	Wdr20	chr12	protein_coding	WD repeat domain 20
chr12	110745912	110746122	+	110745912	110769839	A3SS	0.25	50	50	ENSMUST00000193053.6	ENSMUSG00000037957.15	Wdr20	chr12	protein_coding	WD repeat domain 20
chr12	110745912	110755612	+	110745912	110769839	A3SS	0.25	50	50	ENSMUST00000193053.6	ENSMUSG00000037957.15	Wdr20	chr12	protein_coding	WD repeat domain 20
chr12	110745912	110759548	+	110745912	110769839	A3SS	0.25	50	50	ENSMUST00000193053.6	ENSMUSG00000037957.15	Wdr20	chr12	protein_coding	WD repeat domain 20
chr12	110763441	110769839	+	110745912	110769839	A5SS	0.5	50	50	ENSMUST00000193053.6	ENSMUSG00000037957.15	Wdr20	chr12	protein_coding	WD repeat domain 20
chr12	110745912	110759548	+	110745912;110755671	110755612;110759548	ES	0.33	50	50	ENSMUST00000192870.6	ENSMUSG00000037957.15	Wdr20	chr12	protein_coding	WD repeat domain 20
chr12	110745912;110746324	110746122;110759548	+	110745912;110755671	110755612;110759548	MXE	0.5	100	100	ENSMUST00000192870.6	ENSMUSG00000037957.15	Wdr20	chr12	protein_coding	WD repeat domain 20
chr12	110745912;110746324	110746122;110759548	+	110745912	110759548	cassetteExon	0.5	100	100	ENSMUST00000095410.8	ENSMUSG00000037957.15	Wdr20	chr12	protein_coding	WD repeat domain 20
chr12	110776457;110778314	110778213;110779949	-	110776457	110779949	cassetteExon	0.5	100	100	ENSMUST00000084974.11	ENSMUSG00000056458.17	Mok	chr12	protein_coding	MOK protein kinase
chr12	110781643;110800674	110800560;110807180	-	110781643	110807180	cassetteExon	0.5	100	100	ENSMUST00000084974.11	ENSMUSG00000056458.17	Mok	chr12	protein_coding	MOK protein kinase
chr12	110776457	110777039	-	110776457	110779949	A5SS	0.33	50	50	ENSMUST00000084974.11	ENSMUSG00000056458.17	Mok	chr12	protein_coding	MOK protein kinase
chr12	110781643	110792876	-	110781643	110807180	A5SS	0.33	50	50	ENSMUST00000084974.11	ENSMUSG00000056458.17	Mok	chr12	protein_coding	MOK protein kinase
chr12	110776457	110778213	-	110776457;110777212	110777039;110778213	ES	0.5	50	50	ENSMUST00000070565.15	ENSMUSG00000056458.17	Mok	chr12	protein_coding	MOK protein kinase
chr12	110794564	110800560	-	110781643	110800560	A3SS	0.5	50	50	ENSMUST00000177224.2	ENSMUSG00000056458.17	Mok	chr12	protein_coding	MOK protein kinase
chr12	110781643	110792876	-	110781643	110800560	A5SS	0.33	50	50	ENSMUST00000177224.2	ENSMUSG00000056458.17	Mok	chr12	protein_coding	MOK protein kinase
chr12	110816997	110821434	+	110816877	110821434	A5SS	0.5	50	50	ENSMUST00000221549.2	ENSMUSG00000021271.6	Zfp839	chr12	protein_coding	zinc finger protein 839
chr12	110822306	110830398	+	110822306;110827457	110827230;110830398	ES	0.5	50	50	ENSMUST00000170060.4	ENSMUSG00000021271.6	Zfp839	chr12	protein_coding	zinc finger protein 839
chr12	110840563	110846119	-	110840563;110843404	110843275;110846119	ES	0.25	50	50	ENSMUST00000043716.9	ENSMUSG00000021276.11	Cinp	chr12	protein_coding	cyclin-dependent kinase 2 interacting protein
chr12	110846248	110855500	-	110846248;110850492	110850324;110855500	ES	0.5	50	50	ENSMUST00000043716.9	ENSMUSG00000021276.11	Cinp	chr12	protein_coding	cyclin-dependent kinase 2 interacting protein
chr12	110843404;110843806	110843657;110846119	-	110843404	110846119	cassetteExon	0.5	100	100	ENSMUST00000043716.9	ENSMUSG00000021276.11	Cinp	chr12	protein_coding	cyclin-dependent kinase 2 interacting protein
chr12	110846248;110849980	110849852;110850324	-	110846248	110850324	cassetteExon	0.5	100	100	ENSMUST00000043716.9	ENSMUSG00000021276.11	Cinp	chr12	protein_coding	cyclin-dependent kinase 2 interacting protein
chr12	110841710	110843275	-	110840563	110843275	A3SS	0.5	50	50	ENSMUST00000043716.9	ENSMUSG00000021276.11	Cinp	chr12	protein_coding	cyclin-dependent kinase 2 interacting protein
chr12	110845473	110846119	-	110843404	110846119	A3SS	0.25	50	50	ENSMUST00000043716.9	ENSMUSG00000021276.11	Cinp	chr12	protein_coding	cyclin-dependent kinase 2 interacting protein
chr12	110843806;110845473	110845422;110846119	-	110843806	110846119	cassetteExon	0.5	100	100	ENSMUST00000220607.2	ENSMUSG00000021276.11	Cinp	chr12	protein_coding	cyclin-dependent kinase 2 interacting protein
chr12	110846248	110849852	-	110846248	110855500	A5SS	0.33	50	50	ENSMUST00000221182.2	ENSMUSG00000021276.11	Cinp	chr12	protein_coding	cyclin-dependent kinase 2 interacting protein
chr12	110843806	110846119	-	110840563	110846119	A3SS	0.25	50	50	ENSMUST00000221102.2	ENSMUSG00000021276.11	Cinp	chr12	protein_coding	cyclin-dependent kinase 2 interacting protein
chr12	110845473	110846119	-	110840563	110846119	A3SS	0.25	50	50	ENSMUST00000221102.2	ENSMUSG00000021276.11	Cinp	chr12	protein_coding	cyclin-dependent kinase 2 interacting protein
chr12	110843404	110846119	-	110843404	110843657	5pMXE	0.5	50	50	ENSMUST00000221414.2	ENSMUSG00000021276.11	Cinp	chr12	protein_coding	cyclin-dependent kinase 2 interacting protein
chr12	110846248	110855500	-	110846248	110850324	5pMXE	0.33	50	50	ENSMUST00000223170.2	ENSMUSG00000021276.11	Cinp	chr12	protein_coding	cyclin-dependent kinase 2 interacting protein
chr12	110844353	110845422	-	110843806	110845422	A3SS	0.5	50	50	ENSMUST00000223170.2	ENSMUSG00000021276.11	Cinp	chr12	protein_coding	cyclin-dependent kinase 2 interacting protein
chr12	110843806	110846119	-	110845473	110846119	3pMXE	0.25	50	50	ENSMUST00000223407.2	ENSMUSG00000021276.11	Cinp	chr12	protein_coding	cyclin-dependent kinase 2 interacting protein
chr12	110855760;110861960	110861909;110862521	+	110855760	110862521	cassetteExon	0.5	100	100	ENSMUST00000165978.3	ENSMUSG00000021275.17	Tecpr2	chr12	protein_coding	tectonin beta-propeller repeat containing 2
chr12	110885460	110892630	+	110885460	110892598	A3SS	0.5	50	50	ENSMUST00000165978.3	ENSMUSG00000021275.17	Tecpr2	chr12	protein_coding	tectonin beta-propeller repeat containing 2
chr12	110895598	110897724	+	110895598	110897834	A3SS	0.5	50	50	ENSMUST00000165978.3	ENSMUSG00000021275.17	Tecpr2	chr12	protein_coding	tectonin beta-propeller repeat containing 2
chr12	110855760	110862521	+	110861960	110862521	5pMXE	0.5	50	50	ENSMUST00000223210.2	ENSMUSG00000021275.17	Tecpr2	chr12	protein_coding	tectonin beta-propeller repeat containing 2
chr12	110943982	110945274	-	110943982;110944561	110944382;110945274	ES	0.5	50	50	ENSMUST00000128353.8	ENSMUSG00000037904.15	Ankrd9	chr12	protein_coding	ankyrin repeat domain 9
chr12	110943982;110944204	110944098;110944382	-	110943982	110944382	cassetteExon	0.5	100	100	ENSMUST00000128353.8	ENSMUSG00000037904.15	Ankrd9	chr12	protein_coding	ankyrin repeat domain 9
chr12	110944561	110944820	-	110944561	110945274	A5SS	0.33	50	50	ENSMUST00000128353.8	ENSMUSG00000037904.15	Ankrd9	chr12	protein_coding	ankyrin repeat domain 9
chr12	110944561	110944904	-	110944561	110945274	A5SS	0.33	50	50	ENSMUST00000128353.8	ENSMUSG00000037904.15	Ankrd9	chr12	protein_coding	ankyrin repeat domain 9
chr12	110943982	110945274	-	110943982	110944382	5pMXE	0.33	50	50	ENSMUST00000148765.2	ENSMUSG00000037904.15	Ankrd9	chr12	protein_coding	ankyrin repeat domain 9
chr12	110944561	110944820	-	110944561	110944904	A5SS	0.33	50	50	ENSMUST00000140788.8	ENSMUSG00000037904.15	Ankrd9	chr12	protein_coding	ankyrin repeat domain 9
chr12	110943982;110944561	110944098;110945274	-	110943982	110945274	cassetteExon	0.5	100	100	ENSMUST00000142012.2	ENSMUSG00000037904.15	Ankrd9	chr12	protein_coding	ankyrin repeat domain 9
chr12	110943982	110944382	-	110944204	110944382	A3SS	0.5	50	50	ENSMUST00000043459.13	ENSMUSG00000037904.15	Ankrd9	chr12	protein_coding	ankyrin repeat domain 9
chr12	110943982	110945274	-	110944561	110945274	A3SS&ES	0.5	50	50	ENSMUST00000043459.13	ENSMUSG00000037904.15	Ankrd9	chr12	protein_coding	ankyrin repeat domain 9
chr12	111133036;111186355	111186245;111203996	+	111133036	111203996	cassetteExon	0.5	100	100	ENSMUST00000117269.8	ENSMUSG00000021277.17	Traf3	chr12	protein_coding	TNF receptor-associated factor 3
chr12	111215080;111217638	111217564;111219098	+	111215080	111219098	cassetteExon	0.5	100	100	ENSMUST00000117269.8	ENSMUSG00000021277.17	Traf3	chr12	protein_coding	TNF receptor-associated factor 3
chr12	111133036	111133433	+	111133036	111203996	A3SS	0.33	50	50	ENSMUST00000117269.8	ENSMUSG00000021277.17	Traf3	chr12	protein_coding	TNF receptor-associated factor 3
chr12	111133036;111133541	111133433;111186245	+	111133036	111186245	cassetteExon	0.5	100	100	ENSMUST00000021706.11	ENSMUSG00000021277.17	Traf3	chr12	protein_coding	TNF receptor-associated factor 3
chr12	111251738	111258548	+	111251738	111253052	3pMXE	0.5	50	50	ENSMUST00000181561.3	ENSMUSG00000097381.3	A230087F16Rik	chr12	lncRNA	RIKEN cDNA A230087F16 gene
chr12	111268664	111268791	-	111268664	111270264	A5SS	0.5	50	50	ENSMUST00000041965.5	ENSMUSG00000021279.6	Cdc42bpb	chr12	protein_coding	CDC42 binding protein kinase beta
chr12	111384188	111387933	+	111384188;111385298	111385194;111387933	ES	0.25	50	50	ENSMUST00000222126.2	ENSMUSG00000021280.10	Exoc3l4	chr12	protein_coding	exocyst complex component 3-like 4
chr12	111385298	111387862	+	111385298	111387933	A3SS	0.5	50	50	ENSMUST00000222126.2	ENSMUSG00000021280.10	Exoc3l4	chr12	protein_coding	exocyst complex component 3-like 4
chr12	111388017	111388367	+	111388017	111388497	A3SS	0.5	50	50	ENSMUST00000222126.2	ENSMUSG00000021280.10	Exoc3l4	chr12	protein_coding	exocyst complex component 3-like 4
chr12	111383954	111385194	+	111384188	111385194	A5SS	0.5	50	50	ENSMUST00000222126.2	ENSMUSG00000021280.10	Exoc3l4	chr12	protein_coding	exocyst complex component 3-like 4
chr12	111383954	111387933	+	111385298	111387933	A5SS&ES	0.25	50	50	ENSMUST00000222126.2	ENSMUSG00000021280.10	Exoc3l4	chr12	protein_coding	exocyst complex component 3-like 4
chr12	111387084	111387933	+	111385298	111387933	A5SS	0.25	50	50	ENSMUST00000222126.2	ENSMUSG00000021280.10	Exoc3l4	chr12	protein_coding	exocyst complex component 3-like 4
chr12	111383954	111387933	+	111384188	111387933	A5SS	0.25	50	50	ENSMUST00000223050.2	ENSMUSG00000021280.10	Exoc3l4	chr12	protein_coding	exocyst complex component 3-like 4
chr12	111387084	111387933	+	111384188	111387933	A5SS	0.25	50	50	ENSMUST00000223050.2	ENSMUSG00000021280.10	Exoc3l4	chr12	protein_coding	exocyst complex component 3-like 4
chr12	111383954	111387933	+	111383954;111385298	111385194;111387933	ES	0.25	50	50	ENSMUST00000072646.8	ENSMUSG00000021280.10	Exoc3l4	chr12	protein_coding	exocyst complex component 3-like 4
chr12	111383954;111384188	111384096;111385194	+	111383954	111385194	cassetteExon	0.5	100	100	ENSMUST00000072646.8	ENSMUSG00000021280.10	Exoc3l4	chr12	protein_coding	exocyst complex component 3-like 4
chr12	111383954;111384188	111384096;111387933	+	111383954;111385298	111385194;111387933	MXE	0.5	100	100	ENSMUST00000072646.8	ENSMUSG00000021280.10	Exoc3l4	chr12	protein_coding	exocyst complex component 3-like 4
chr12	111383954;111384188	111384123;111385194	+	111383954	111385194	cassetteExon	0.5	100	100	ENSMUST00000072646.8	ENSMUSG00000021280.10	Exoc3l4	chr12	protein_coding	exocyst complex component 3-like 4
chr12	111383954;111384188	111384123;111387933	+	111383954;111385298	111385194;111387933	MXE	0.5	100	100	ENSMUST00000072646.8	ENSMUSG00000021280.10	Exoc3l4	chr12	protein_coding	exocyst complex component 3-like 4
chr12	111383954;111384188	111384096;111387933	+	111383954	111387933	cassetteExon	0.5	100	100	ENSMUST00000223431.2	ENSMUSG00000021280.10	Exoc3l4	chr12	protein_coding	exocyst complex component 3-like 4
chr12	111383954;111384188	111384123;111387933	+	111383954	111387933	cassetteExon	0.5	100	100	ENSMUST00000223431.2	ENSMUSG00000021280.10	Exoc3l4	chr12	protein_coding	exocyst complex component 3-like 4
chr12	111387084	111387933	+	111383954	111387933	A5SS	0.25	50	50	ENSMUST00000223431.2	ENSMUSG00000021280.10	Exoc3l4	chr12	protein_coding	exocyst complex component 3-like 4
chr12	111383954	111384123	+	111383954	111384096	A3SS	0.25	50	50	ENSMUST00000221144.2	ENSMUSG00000021280.10	Exoc3l4	chr12	protein_coding	exocyst complex component 3-like 4
chr12	111383954	111387933	+	111383954	111384096	A3SS&ES	0.25	50	50	ENSMUST00000221144.2	ENSMUSG00000021280.10	Exoc3l4	chr12	protein_coding	exocyst complex component 3-like 4
chr12	111384188	111387933	+	111384188	111385194	A3SS&ES	0.5	50	50	ENSMUST00000221144.2	ENSMUSG00000021280.10	Exoc3l4	chr12	protein_coding	exocyst complex component 3-like 4
chr12	111411717	111414417	+	111411717;111412571	111411941;111414417	ES	0.5	50	50	ENSMUST00000102745.10	ENSMUSG00000021281.16	Tnfaip2	chr12	protein_coding	tumor necrosis factor, alpha-induced protein 2
chr12	111412571	111414681	+	111412571;111414531	111414417;111414681	ES	0.33	50	50	ENSMUST00000102745.10	ENSMUSG00000021281.16	Tnfaip2	chr12	protein_coding	tumor necrosis factor, alpha-induced protein 2
chr12	111417239	111417785	+	111417239;111417632	111417477;111417785	ES	0.5	50	50	ENSMUST00000102745.10	ENSMUSG00000021281.16	Tnfaip2	chr12	protein_coding	tumor necrosis factor, alpha-induced protein 2
chr12	111414803	111414922	+	111414803	111414973	A3SS	0.5	50	50	ENSMUST00000102745.10	ENSMUSG00000021281.16	Tnfaip2	chr12	protein_coding	tumor necrosis factor, alpha-induced protein 2
chr12	111415073	111415174	+	111415073	111415665	A3SS	0.5	50	50	ENSMUST00000102745.10	ENSMUSG00000021281.16	Tnfaip2	chr12	protein_coding	tumor necrosis factor, alpha-induced protein 2
chr12	111416323	111417092	+	111416323	111417117	A3SS	0.5	50	50	ENSMUST00000102745.10	ENSMUSG00000021281.16	Tnfaip2	chr12	protein_coding	tumor necrosis factor, alpha-induced protein 2
chr12	111410795	111411363	+	111409117	111411363	A5SS	0.5	50	50	ENSMUST00000102745.10	ENSMUSG00000021281.16	Tnfaip2	chr12	protein_coding	tumor necrosis factor, alpha-induced protein 2
chr12	111411717	111414681	+	111411717;111414531	111414417;111414681	ES	0.33	50	50	ENSMUST00000172783.8	ENSMUSG00000021281.16	Tnfaip2	chr12	protein_coding	tumor necrosis factor, alpha-induced protein 2
chr12	111411717	111411941	+	111411717	111414417	A3SS	0.33	50	50	ENSMUST00000172783.8	ENSMUSG00000021281.16	Tnfaip2	chr12	protein_coding	tumor necrosis factor, alpha-induced protein 2
chr12	111412571	111414417	+	111411717	111414417	A5SS	0.5	50	50	ENSMUST00000172783.8	ENSMUSG00000021281.16	Tnfaip2	chr12	protein_coding	tumor necrosis factor, alpha-induced protein 2
chr12	111412571	111414681	+	111414531	111414681	A5SS&ES	0.33	50	50	ENSMUST00000172783.8	ENSMUSG00000021281.16	Tnfaip2	chr12	protein_coding	tumor necrosis factor, alpha-induced protein 2
chr12	111411717	111414681	+	111411717	111411941	3pMXE	0.33	50	50	ENSMUST00000129467.2	ENSMUSG00000021281.16	Tnfaip2	chr12	protein_coding	tumor necrosis factor, alpha-induced protein 2
chr12	111412571	111414681	+	111411717	111414681	A5SS	0.33	50	50	ENSMUST00000174298.8	ENSMUSG00000021281.16	Tnfaip2	chr12	protein_coding	tumor necrosis factor, alpha-induced protein 2
chr12	111463158	111464695	-	111417503	111464695	A3SS	0.5	50	50	ENSMUST00000221429.2	ENSMUSG00000113029.2	Gm40578	chr12	lncRNA	predicted gene, 40578
chr12	111504673	111505842	+	111504673;111504982	111504789;111505842	ES	0.25	50	50	ENSMUST00000166123.9	ENSMUSG00000021282.18	Eif5	chr12	protein_coding	eukaryotic translation initiation factor 5
chr12	111506121	111506564	+	111506121;111506316	111506235;111506564	ES	0.33	50	50	ENSMUST00000166123.9	ENSMUSG00000021282.18	Eif5	chr12	protein_coding	eukaryotic translation initiation factor 5
chr12	111508744	111509534	+	111508744;111509275	111509114;111509534	ES	0.5	50	50	ENSMUST00000166123.9	ENSMUSG00000021282.18	Eif5	chr12	protein_coding	eukaryotic translation initiation factor 5
chr12	111509275	111509961	+	111509275;111509698	111509534;111509961	ES	0.5	50	50	ENSMUST00000166123.9	ENSMUSG00000021282.18	Eif5	chr12	protein_coding	eukaryotic translation initiation factor 5
chr12	111504982	111505981	+	111504982	111505842	A3SS	0.5	50	50	ENSMUST00000166123.9	ENSMUSG00000021282.18	Eif5	chr12	protein_coding	eukaryotic translation initiation factor 5
chr12	111508744	111509214	+	111508744	111509114	A3SS	0.33	50	50	ENSMUST00000166123.9	ENSMUSG00000021282.18	Eif5	chr12	protein_coding	eukaryotic translation initiation factor 5
chr12	111505381	111505842	+	111504982	111505842	A5SS	0.25	50	50	ENSMUST00000166123.9	ENSMUSG00000021282.18	Eif5	chr12	protein_coding	eukaryotic translation initiation factor 5
chr12	111505586	111505842	+	111504982	111505842	A5SS	0.25	50	50	ENSMUST00000166123.9	ENSMUSG00000021282.18	Eif5	chr12	protein_coding	eukaryotic translation initiation factor 5
chr12	111506345	111506564	+	111506316	111506564	A5SS	0.33	50	50	ENSMUST00000166123.9	ENSMUSG00000021282.18	Eif5	chr12	protein_coding	eukaryotic translation initiation factor 5
chr12	111505381	111505842	+	111504673	111505842	A5SS	0.25	50	50	ENSMUST00000222441.2	ENSMUSG00000021282.18	Eif5	chr12	protein_coding	eukaryotic translation initiation factor 5
chr12	111505586	111505842	+	111504673	111505842	A5SS	0.25	50	50	ENSMUST00000222441.2	ENSMUSG00000021282.18	Eif5	chr12	protein_coding	eukaryotic translation initiation factor 5
chr12	111504673	111505842	+	111504673	111504789	3pMXE	0.5	50	50	ENSMUST00000221648.2	ENSMUSG00000021282.18	Eif5	chr12	protein_coding	eukaryotic translation initiation factor 5
chr12	111508744;111509275	111509114;111509961	+	111508744;111509698	111509534;111509961	MXE	0.5	100	100	ENSMUST00000222388.2	ENSMUSG00000021282.18	Eif5	chr12	protein_coding	eukaryotic translation initiation factor 5
chr12	111508744;111509275	111509214;111509534	+	111508744	111509534	cassetteExon	0.5	100	100	ENSMUST00000222388.2	ENSMUSG00000021282.18	Eif5	chr12	protein_coding	eukaryotic translation initiation factor 5
chr12	111508744;111509275	111509214;111509961	+	111508744;111509698	111509534;111509961	MXE	0.5	100	100	ENSMUST00000222388.2	ENSMUSG00000021282.18	Eif5	chr12	protein_coding	eukaryotic translation initiation factor 5
chr12	111504673	111505842	+	111504982	111505842	5pMXE	0.25	50	50	ENSMUST00000221292.2	ENSMUSG00000021282.18	Eif5	chr12	protein_coding	eukaryotic translation initiation factor 5
chr12	111506121;111506345	111506235;111506564	+	111506121	111506564	cassetteExon	0.5	100	100	ENSMUST00000221292.2	ENSMUSG00000021282.18	Eif5	chr12	protein_coding	eukaryotic translation initiation factor 5
chr12	111506121	111506564	+	111506121	111506235	3pMXE	0.5	50	50	ENSMUST00000221872.2	ENSMUSG00000021282.18	Eif5	chr12	protein_coding	eukaryotic translation initiation factor 5
chr12	111505586	111505842	+	111505381	111505842	A5SS	0.25	50	50	ENSMUST00000050993.11	ENSMUSG00000021282.18	Eif5	chr12	protein_coding	eukaryotic translation initiation factor 5
chr12	111509275	111509961	+	111509698	111509961	A5SS	0.5	50	50	ENSMUST00000221243.2	ENSMUSG00000021282.18	Eif5	chr12	protein_coding	eukaryotic translation initiation factor 5
chr12	111539708	111540307	-	111540174	111540307	A3SS	0.5	50	50	ENSMUST00000180698.3	ENSMUSG00000096995.3	2810029C07Rik	chr12	lncRNA	RIKEN cDNA 2810029C07 gene
chr12	111570998;111572809	111572770;111581830	+	111570998	111581830	cassetteExon	0.5	100	100	ENSMUST00000075281.8	ENSMUSG00000007411.17	Mark3	chr12	protein_coding	MAP/microtubule affinity regulating kinase 3
chr12	111606474;111613282	111613124;111613905	+	111606474	111613905	cassetteExon	0.5	100	100	ENSMUST00000075281.8	ENSMUSG00000007411.17	Mark3	chr12	protein_coding	MAP/microtubule affinity regulating kinase 3
chr12	111614162;111619868	111619824;111621704	+	111614162	111621704	cassetteExon	0.5	100	100	ENSMUST00000075281.8	ENSMUSG00000007411.17	Mark3	chr12	protein_coding	MAP/microtubule affinity regulating kinase 3
chr12	111614162	111618392	+	111614162	111621704	A3SS	0.33	50	50	ENSMUST00000075281.8	ENSMUSG00000007411.17	Mark3	chr12	protein_coding	MAP/microtubule affinity regulating kinase 3
chr12	111621181	111621704	+	111614162	111621704	A5SS	0.33	50	50	ENSMUST00000075281.8	ENSMUSG00000007411.17	Mark3	chr12	protein_coding	MAP/microtubule affinity regulating kinase 3
chr12	111614162;111618418	111618392;111619824	+	111614162	111619824	cassetteExon	0.5	100	100	ENSMUST00000084953.13	ENSMUSG00000007411.17	Mark3	chr12	protein_coding	MAP/microtubule affinity regulating kinase 3
chr12	111621181	111621704	+	111619868	111621704	A5SS	0.33	50	50	ENSMUST00000084953.13	ENSMUSG00000007411.17	Mark3	chr12	protein_coding	MAP/microtubule affinity regulating kinase 3
chr12	111570998	111572770	+	111570998	111589679	A3SS	0.33	50	50	ENSMUST00000221448.2	ENSMUSG00000007411.17	Mark3	chr12	protein_coding	MAP/microtubule affinity regulating kinase 3
chr12	111570998	111581830	+	111570998	111589679	A3SS	0.33	50	50	ENSMUST00000221448.2	ENSMUSG00000007411.17	Mark3	chr12	protein_coding	MAP/microtubule affinity regulating kinase 3
chr12	111584817	111589679	+	111570998	111589679	A5SS	0.5	50	50	ENSMUST00000221448.2	ENSMUSG00000007411.17	Mark3	chr12	protein_coding	MAP/microtubule affinity regulating kinase 3
chr12	111644734	111645037	+	111644595	111645037	A5SS	0.5	50	50	ENSMUST00000221089.2	ENSMUSG00000060950.13	Trmt61a	chr12	protein_coding	tRNA methyltransferase 61A
chr12	111677846	111679019	-	111677846	111679478	A5SS	0.25	50	50	ENSMUST00000054636.7	ENSMUSG00000049792.7	Bag5	chr12	protein_coding	BCL2-associated athanogene 5
chr12	111677846	111679079	-	111677846	111679478	A5SS	0.25	50	50	ENSMUST00000054636.7	ENSMUSG00000049792.7	Bag5	chr12	protein_coding	BCL2-associated athanogene 5
chr12	111677846	111679147	-	111677846	111679478	A5SS	0.25	50	50	ENSMUST00000054636.7	ENSMUSG00000049792.7	Bag5	chr12	protein_coding	BCL2-associated athanogene 5
chr12	111677846	111679079	-	111677846	111679019	A5SS	0.25	50	50	ENSMUST00000160576.2	ENSMUSG00000049792.7	Bag5	chr12	protein_coding	BCL2-associated athanogene 5
chr12	111677846	111679147	-	111677846	111679019	A5SS	0.25	50	50	ENSMUST00000160576.2	ENSMUSG00000049792.7	Bag5	chr12	protein_coding	BCL2-associated athanogene 5
chr12	111677846	111679079	-	111677846	111679147	A5SS	0.25	50	50	ENSMUST00000160825.2	ENSMUSG00000049792.7	Bag5	chr12	protein_coding	BCL2-associated athanogene 5
chr12	111696546	111717621	+	111696546	111700101	3pMXE	0.5	50	50	ENSMUST00000040519.12	ENSMUSG00000037787.15	Coa8	chr12	protein_coding	cytochrome c oxidase assembly factor 8
chr12	111679852;111688240	111688181;111689046	+	111679852	111689046	cassetteExon	0.5	100	100	ENSMUST00000040519.12	ENSMUSG00000037787.15	Coa8	chr12	protein_coding	cytochrome c oxidase assembly factor 8
chr12	111754030	111755783	+	111754030	111755759	A3SS	0.5	50	50	ENSMUST00000239017.2	ENSMUSG00000021288.20	Klc1	chr12	protein_coding	kinesin light chain 1
chr12	111755920	111760083	+	111755920	111761982	A3SS	0.33	50	50	ENSMUST00000239017.2	ENSMUSG00000021288.20	Klc1	chr12	protein_coding	kinesin light chain 1
chr12	111755920	111760771	+	111755920	111761982	A3SS	0.33	50	50	ENSMUST00000239017.2	ENSMUSG00000021288.20	Klc1	chr12	protein_coding	kinesin light chain 1
chr12	111772508	111774217	+	111772508	111772749	3pMXE	0.5	50	50	ENSMUST00000084941.12	ENSMUSG00000021288.20	Klc1	chr12	protein_coding	kinesin light chain 1
chr12	111762112	111766778	+	111762112	111772442	A3SS	0.5	50	50	ENSMUST00000084941.12	ENSMUSG00000021288.20	Klc1	chr12	protein_coding	kinesin light chain 1
chr12	111755893	111772442	+	111762112	111772442	A5SS&ES	0.5	50	50	ENSMUST00000084941.12	ENSMUSG00000021288.20	Klc1	chr12	protein_coding	kinesin light chain 1
chr12	111755893	111772442	+	111755893	111760771	3pMXE	0.5	50	50	ENSMUST00000118471.8	ENSMUSG00000021288.20	Klc1	chr12	protein_coding	kinesin light chain 1
chr12	111755920	111760771	+	111755893	111760771	A5SS	0.33	50	50	ENSMUST00000118471.8	ENSMUSG00000021288.20	Klc1	chr12	protein_coding	kinesin light chain 1
chr12	111760133	111760771	+	111755893	111760771	A5SS	0.33	50	50	ENSMUST00000118471.8	ENSMUSG00000021288.20	Klc1	chr12	protein_coding	kinesin light chain 1
chr12	111755920	111760771	+	111755920;111760133	111760083;111760771	ES	0.33	50	50	ENSMUST00000120544.9	ENSMUSG00000021288.20	Klc1	chr12	protein_coding	kinesin light chain 1
chr12	111774421	111777292	-	111774421;111776398	111776186;111777292	ES	0.25	50	50	ENSMUST00000127281.8	ENSMUSG00000021287.13	Xrcc3	chr12	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 3
chr12	111777429	111780259	-	111777429	111778495	5pMXE	0.5	50	50	ENSMUST00000127281.8	ENSMUSG00000021287.13	Xrcc3	chr12	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 3
chr12	111771561	111774267	-	111771473	111774267	A3SS	0.5	50	50	ENSMUST00000127281.8	ENSMUSG00000021287.13	Xrcc3	chr12	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 3
chr12	111776378	111777292	-	111776398	111777292	A3SS	0.25	50	50	ENSMUST00000127281.8	ENSMUSG00000021287.13	Xrcc3	chr12	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 3
chr12	111776381	111777292	-	111776398	111777292	A3SS	0.25	50	50	ENSMUST00000127281.8	ENSMUSG00000021287.13	Xrcc3	chr12	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 3
chr12	111778210	111778495	-	111777429	111778495	A3SS	0.5	50	50	ENSMUST00000127281.8	ENSMUSG00000021287.13	Xrcc3	chr12	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 3
chr12	111777429	111780259	-	111777429;111778653	111778495;111780259	ES	0.5	50	50	ENSMUST00000021715.6	ENSMUSG00000021287.13	Xrcc3	chr12	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 3
chr12	111774421	111777292	-	111774421	111776186	5pMXE	0.5	50	50	ENSMUST00000146491.8	ENSMUSG00000021287.13	Xrcc3	chr12	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 3
chr12	111774421;111776378	111776186;111777292	-	111774421	111777292	cassetteExon	0.5	100	100	ENSMUST00000145109.8	ENSMUSG00000021287.13	Xrcc3	chr12	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 3
chr12	111774421;111776381	111776186;111777292	-	111774421	111777292	cassetteExon	0.5	100	100	ENSMUST00000145109.8	ENSMUSG00000021287.13	Xrcc3	chr12	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 3
chr12	111774421	111777292	-	111776381	111777292	3pMXE	0.25	50	50	ENSMUST00000132177.8	ENSMUSG00000021287.13	Xrcc3	chr12	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 3
chr12	111776378	111777292	-	111776381	111777292	A3SS	0.25	50	50	ENSMUST00000132177.8	ENSMUSG00000021287.13	Xrcc3	chr12	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 3
chr12	111774421	111777292	-	111776378	111777292	3pMXE	0.25	50	50	ENSMUST00000129258.2	ENSMUSG00000021287.13	Xrcc3	chr12	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 3
chr12	111791542;111792066	111792010;111793977	+	111791542	111793977	cassetteExon	0.5	100	100	ENSMUST00000021714.9	ENSMUSG00000021286.9	Zfyve21	chr12	protein_coding	zinc finger, FYVE domain containing 21
chr12	111791542;111792066	111792013;111793977	+	111791542	111793977	cassetteExon	0.5	100	100	ENSMUST00000021714.9	ENSMUSG00000021286.9	Zfyve21	chr12	protein_coding	zinc finger, FYVE domain containing 21
chr12	111782718	111789676	+	111780811	111789676	A5SS	0.5	50	50	ENSMUST00000021714.9	ENSMUSG00000021286.9	Zfyve21	chr12	protein_coding	zinc finger, FYVE domain containing 21
chr12	111791542	111792010	+	111791542	111792013	A3SS	0.33	50	50	ENSMUST00000223211.2	ENSMUSG00000021286.9	Zfyve21	chr12	protein_coding	zinc finger, FYVE domain containing 21
chr12	111791542	111792010	+	111791542	111798475	A3SS	0.25	50	50	ENSMUST00000222843.2	ENSMUSG00000021286.9	Zfyve21	chr12	protein_coding	zinc finger, FYVE domain containing 21
chr12	111791542	111792013	+	111791542	111798475	A3SS	0.25	50	50	ENSMUST00000222843.2	ENSMUSG00000021286.9	Zfyve21	chr12	protein_coding	zinc finger, FYVE domain containing 21
chr12	111791542	111793977	+	111791542	111798475	A3SS	0.25	50	50	ENSMUST00000222843.2	ENSMUSG00000021286.9	Zfyve21	chr12	protein_coding	zinc finger, FYVE domain containing 21
chr12	111802210;111803540	111803436;111805035	-	111802210	111805035	cassetteExon	0.5	100	100	ENSMUST00000054815.15	ENSMUSG00000021285.16	Ppp1r13b	chr12	protein_coding	protein phosphatase 1, regulatory subunit 13B
chr12	111832771	111832849	-	111824720	111832849	A3SS	0.5	50	50	ENSMUST00000054815.15	ENSMUSG00000021285.16	Ppp1r13b	chr12	protein_coding	protein phosphatase 1, regulatory subunit 13B
chr12	111838867	111873919	-	111838867	111874296	A5SS	0.5	50	50	ENSMUST00000054815.15	ENSMUSG00000021285.16	Ppp1r13b	chr12	protein_coding	protein phosphatase 1, regulatory subunit 13B
chr12	111909645	111910591	-	111909645;111910431	111910319;111910591	ES	0.33	50	50	ENSMUST00000221314.2	ENSMUSG00000113769.2	5033406O09Rik	chr12	lncRNA	RIKEN cDNA 5033406O09 gene
chr12	111910500	111910591	-	111910431	111910591	A3SS	0.33	50	50	ENSMUST00000221314.2	ENSMUSG00000113769.2	5033406O09Rik	chr12	lncRNA	RIKEN cDNA 5033406O09 gene
chr12	111909645	111910591	-	111909645;111910500	111910319;111910591	ES	0.33	50	50	ENSMUST00000221669.2	ENSMUSG00000113769.2	5033406O09Rik	chr12	lncRNA	RIKEN cDNA 5033406O09 gene
chr12	111909645	111910591	-	111909645	111910319	5pMXE	0.5	50	50	ENSMUST00000223453.2	ENSMUSG00000113769.2	5033406O09Rik	chr12	lncRNA	RIKEN cDNA 5033406O09 gene
chr12	111929787	111933028	-	111929787	111933358	A5SS	0.33	50	50	ENSMUST00000021719.7	ENSMUSG00000021290.7	Atp5mpl	chr12	protein_coding	ATP synthase membrane subunit 6.8PL
chr12	111929787	111933128	-	111929787	111933358	A5SS	0.33	50	50	ENSMUST00000021719.7	ENSMUSG00000021290.7	Atp5mpl	chr12	protein_coding	ATP synthase membrane subunit 6.8PL
chr12	111929787	111933128	-	111929787	111933028	A5SS	0.33	50	50	ENSMUST00000222874.2	ENSMUSG00000021290.7	Atp5mpl	chr12	protein_coding	ATP synthase membrane subunit 6.8PL
chr12	111968258	111979700	+	111968258;111974010	111973946;111979700	ES	0.5	50	50	ENSMUST00000079009.11	ENSMUSG00000054003.14	Tdrd9	chr12	protein_coding	tudor domain containing 9
chr12	111979754	111980876	+	111979754;111980000	111979916;111980876	ES	0.5	50	50	ENSMUST00000079009.11	ENSMUSG00000054003.14	Tdrd9	chr12	protein_coding	tudor domain containing 9
chr12	111992595	111992687	+	111992408	111992687	A5SS	0.5	50	50	ENSMUST00000079009.11	ENSMUSG00000054003.14	Tdrd9	chr12	protein_coding	tudor domain containing 9
chr12	111992731	111993529	+	111992731	112002788	A3SS	0.5	50	50	ENSMUST00000191808.6	ENSMUSG00000054003.14	Tdrd9	chr12	protein_coding	tudor domain containing 9
chr12	112001116	112002788	+	111992731	112002788	A5SS	0.5	50	50	ENSMUST00000191808.6	ENSMUSG00000054003.14	Tdrd9	chr12	protein_coding	tudor domain containing 9
chr12	112079526	112082001	+	112079526;112080939	112080814;112082001	ES	0.33	50	50	ENSMUST00000079400.6	ENSMUSG00000037686.7	Aspg	chr12	protein_coding	asparaginase
chr12	112082961	112087299	+	112082961;112086500	112086388;112087299	ES	0.5	50	50	ENSMUST00000079400.6	ENSMUSG00000037686.7	Aspg	chr12	protein_coding	asparaginase
chr12	112089473	112091244	+	112089473;112089887	112089724;112091244	ES	0.5	50	50	ENSMUST00000079400.6	ENSMUSG00000037686.7	Aspg	chr12	protein_coding	asparaginase
chr12	112078734;112080601	112080466;112080814	+	112078734;112079526	112079415;112080814	MXE	0.5	100	100	ENSMUST00000079400.6	ENSMUSG00000037686.7	Aspg	chr12	protein_coding	asparaginase
chr12	112079498	112082001	+	112080939	112082001	A5SS&ES	0.33	50	50	ENSMUST00000079400.6	ENSMUSG00000037686.7	Aspg	chr12	protein_coding	asparaginase
chr12	112078734;112080939	112080466;112082001	+	112078734;112079526	112079415;112082001	MXE	0.5	100	100	ENSMUST00000223412.2	ENSMUSG00000037686.7	Aspg	chr12	protein_coding	asparaginase
chr12	112079498	112082001	+	112079526	112082001	A5SS	0.33	50	50	ENSMUST00000223412.2	ENSMUSG00000037686.7	Aspg	chr12	protein_coding	asparaginase
chr12	112078734	112080466	+	112078734	112079415	3pMXE	0.5	50	50	ENSMUST00000221091.2	ENSMUSG00000037686.7	Aspg	chr12	protein_coding	asparaginase
chr12	112082961	112087299	+	112086500	112087299	5pMXE	0.5	50	50	ENSMUST00000222645.2	ENSMUSG00000037686.7	Aspg	chr12	protein_coding	asparaginase
chr12	112145782	112146229	+	112145782;112145934	112145914;112146229	ES	0.5	50	50	ENSMUST00000128402.3	ENSMUSG00000021294.8	Kif26a	chr12	protein_coding	kinesin family member 26A
chr12	112382297	112386380	-	112380511	112386380	A3SS	0.5	50	50	ENSMUST00000221848.2	ENSMUSG00000047828.5	A730018C14Rik	chr12	lncRNA	RIKEN cDNA A730018C14 gene
chr12	112471105	112483063	-	112471105	112477178	5pMXE	0.5	50	50	ENSMUST00000066791.7	ENSMUSG00000054013.7	Tmem179	chr12	protein_coding	transmembrane protein 179
chr12	112578470	112581329	+	112578470;112579038	112578982;112581329	ES	0.5	50	50	ENSMUST00000101029.4	ENSMUSG00000037679.10	Inf2	chr12	protein_coding	inverted formin, FH2 and WH2 domain containing
chr12	112555969	112566428	+	112555329	112566428	A5SS	0.5	50	50	ENSMUST00000101029.4	ENSMUSG00000037679.10	Inf2	chr12	protein_coding	inverted formin, FH2 and WH2 domain containing
chr12	112599179	112599434	+	112599179	112599503	A3SS	0.5	50	50	ENSMUST00000021726.8	ENSMUSG00000011148.15	Adssl1	chr12	protein_coding	adenylosuccinate synthetase like 1
chr12	112605973	112606046	+	112604716	112606046	A5SS	0.5	50	50	ENSMUST00000021726.8	ENSMUSG00000011148.15	Adssl1	chr12	protein_coding	adenylosuccinate synthetase like 1
chr12	112611518	112614259	+	112611518;112613466	112613272;112614259	ES	0.5	50	50	ENSMUST00000021728.12	ENSMUSG00000064326.14	Siva1	chr12	protein_coding	SIVA1, apoptosis-inducing factor
chr12	112623425	112623702	-	112623425;112623630	112623502;112623702	ES	0.5	50	50	ENSMUST00000001780.10	ENSMUSG00000001729.15	Akt1	chr12	protein_coding	thymoma viral proto-oncogene 1
chr12	112638088	112641156	-	112638088	112640434	5pMXE	0.33	50	50	ENSMUST00000001780.10	ENSMUSG00000001729.15	Akt1	chr12	protein_coding	thymoma viral proto-oncogene 1
chr12	112628768	112637950	-	112628742	112637950	A3SS	0.5	50	50	ENSMUST00000001780.10	ENSMUSG00000001729.15	Akt1	chr12	protein_coding	thymoma viral proto-oncogene 1
chr12	112628742	112634404	-	112628742	112637950	A5SS	0.5	50	50	ENSMUST00000001780.10	ENSMUSG00000001729.15	Akt1	chr12	protein_coding	thymoma viral proto-oncogene 1
chr12	112638088	112640140	-	112638088	112640434	A5SS	0.33	50	50	ENSMUST00000001780.10	ENSMUSG00000001729.15	Akt1	chr12	protein_coding	thymoma viral proto-oncogene 1
chr12	112638088	112640140	-	112638088	112641156	A5SS	0.33	50	50	ENSMUST00000144550.9	ENSMUSG00000001729.15	Akt1	chr12	protein_coding	thymoma viral proto-oncogene 1
chr12	112645379	112645810	+	112645379	112645988	A3SS	0.5	50	50	ENSMUST00000174780.2	ENSMUSG00000037638.6	Zbtb42	chr12	protein_coding	zinc finger and BTB domain containing 42
chr12	112688816	112691058	+	112688059	112691058	A5SS	0.5	50	50	ENSMUST00000220942.2	ENSMUSG00000072825.12	Cep170b	chr12	protein_coding	centrosomal protein 170B
chr12	112705943	112707313	+	112705943	112707208	A3SS	0.5	50	50	ENSMUST00000101018.11	ENSMUSG00000072825.12	Cep170b	chr12	protein_coding	centrosomal protein 170B
chr12	112728471	112728960	+	112727217	112728960	A5SS	0.5	50	50	ENSMUST00000063888.5	ENSMUSG00000052160.8	Pld4	chr12	protein_coding	phospholipase D family, member 4
chr12	112785732	112792926	-	112785732	112792469	A5SS	0.5	50	50	ENSMUST00000062092.7	ENSMUSG00000047832.10	Cdca4	chr12	protein_coding	cell division cycle associated 4
chr12	112819525	112830637	-	112819525	112824490	5pMXE	0.5	50	50	ENSMUST00000021729.9	ENSMUSG00000021298.9	Gpr132	chr12	protein_coding	G protein-coupled receptor 132
chr12	112879137	112879500	-	112879137;112879338	112879225;112879500	ES	0.5	50	50	ENSMUST00000075827.5	ENSMUSG00000002799.7	Jag2	chr12	protein_coding	jagged 2
chr12	112876340	112876765	-	112876340	112876785	A5SS	0.5	50	50	ENSMUST00000075827.5	ENSMUSG00000002799.7	Jag2	chr12	protein_coding	jagged 2
chr12	112880559	112880863	-	112880559	112883692	A5SS	0.5	50	50	ENSMUST00000075827.5	ENSMUSG00000002799.7	Jag2	chr12	protein_coding	jagged 2
chr12	112885677	112891836	-	112885677	112892502	A5SS	0.5	50	50	ENSMUST00000075827.5	ENSMUSG00000002799.7	Jag2	chr12	protein_coding	jagged 2
chr12	112879137	112879500	-	112879137	112879225	A5SS	0.5	50	50	ENSMUST00000221696.2	ENSMUSG00000002799.7	Jag2	chr12	protein_coding	jagged 2
chr12	112879137	112879500	-	112879338	112879500	3pMXE	0.5	50	50	ENSMUST00000220771.2	ENSMUSG00000002799.7	Jag2	chr12	protein_coding	jagged 2
chr12	112898670	112902415	-	112898670;112902213	112901976;112902415	ES	0.33	50	50	ENSMUST00000221397.2	ENSMUSG00000002804.5	Nudt14	chr12	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 14
chr12	112902177	112902415	-	112902213	112902415	A3SS	0.33	50	50	ENSMUST00000221397.2	ENSMUSG00000002804.5	Nudt14	chr12	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 14
chr12	112898670	112902415	-	112898670	112901976	A5SS	0.5	50	50	ENSMUST00000222793.2	ENSMUSG00000002804.5	Nudt14	chr12	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 14
chr12	112898670	112902415	-	112898670;112902177	112901976;112902415	ES	0.33	50	50	ENSMUST00000002881.5	ENSMUSG00000002804.5	Nudt14	chr12	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 14
chr12	112937241;112937651	112937470;112943305	-	112937241	112943305	cassetteExon	0.5	100	100	ENSMUST00000011302.9	ENSMUSG00000011158.9	Brf1	chr12	protein_coding	BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit
chr12	112943377	112950079	-	112943377	112946647	A5SS&ES	0.5	50	50	ENSMUST00000011302.9	ENSMUSG00000011158.9	Brf1	chr12	protein_coding	BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit
chr12	112947469	112950079	-	112943377	112950079	A3SS	0.5	50	50	ENSMUST00000223506.2	ENSMUSG00000011158.9	Brf1	chr12	protein_coding	BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit
chr12	112940602	112940873	+	112940602;112940769	112940679;112940873	ES	0.5	50	50	ENSMUST00000165079.8	ENSMUSG00000002803.15	Btbd6	chr12	protein_coding	BTB (POZ) domain containing 6
chr12	112940991	112941136	+	112940991	112941124	A3SS	0.5	50	50	ENSMUST00000165079.8	ENSMUSG00000002803.15	Btbd6	chr12	protein_coding	BTB (POZ) domain containing 6
chr12	112940602	112940873	+	112940602	112940679	3pMXE	0.5	50	50	ENSMUST00000221500.2	ENSMUSG00000002803.15	Btbd6	chr12	protein_coding	BTB (POZ) domain containing 6
chr12	112940602	112940873	+	112940769	112940873	A5SS	0.5	50	50	ENSMUST00000220567.2	ENSMUSG00000002803.15	Btbd6	chr12	protein_coding	BTB (POZ) domain containing 6
chr12	113007933	113010649	+	113007933;113009187	113009098;113010649	ES	0.5	50	50	ENSMUST00000223502.2	ENSMUSG00000021143.11	Pacs2	chr12	protein_coding	phosphofurin acidic cluster sorting protein 2
chr12	112978302;112986868	112986762;113007846	+	112978302	113007846	cassetteExon	0.5	100	100	ENSMUST00000223502.2	ENSMUSG00000021143.11	Pacs2	chr12	protein_coding	phosphofurin acidic cluster sorting protein 2
chr12	113024825	113025260	+	113024831	113025260	A5SS	0.5	50	50	ENSMUST00000223502.2	ENSMUSG00000021143.11	Pacs2	chr12	protein_coding	phosphofurin acidic cluster sorting protein 2
chr12	113038621	113038864	+	113038621	113038725	A3SS	0.5	50	50	ENSMUST00000012355.14	ENSMUSG00000012211.14	Tex22	chr12	protein_coding	testis expressed gene 22
chr12	113038479	113038864	+	113038621	113038864	A5SS	0.33	50	50	ENSMUST00000146107.8	ENSMUSG00000012211.14	Tex22	chr12	protein_coding	testis expressed gene 22
chr12	113038613	113038864	+	113038621	113038864	A5SS	0.33	50	50	ENSMUST00000146107.8	ENSMUSG00000012211.14	Tex22	chr12	protein_coding	testis expressed gene 22
chr12	113038613	113038864	+	113038479	113038864	A5SS	0.33	50	50	ENSMUST00000109729.3	ENSMUSG00000012211.14	Tex22	chr12	protein_coding	testis expressed gene 22
chr12	113080701	113084447	+	113080701;113083881	113083831;113084447	ES	0.5	50	50	ENSMUST00000109727.9	ENSMUSG00000021144.15	Mta1	chr12	protein_coding	metastasis associated 1
chr12	113096957;113097196	113097161;113099417	+	113096957	113099417	cassetteExon	0.5	100	100	ENSMUST00000109727.9	ENSMUSG00000021144.15	Mta1	chr12	protein_coding	metastasis associated 1
chr12	113094620	113094983	+	113094620	113094936	A3SS	0.5	50	50	ENSMUST00000109727.9	ENSMUSG00000021144.15	Mta1	chr12	protein_coding	metastasis associated 1
chr12	113104398	113107079	+	113104234	113107079	A5SS	0.33	50	50	ENSMUST00000084882.9	ENSMUSG00000006356.11	Crip2	chr12	protein_coding	cysteine rich protein 2
chr12	113106515	113107079	+	113104234	113107079	A5SS	0.33	50	50	ENSMUST00000084882.9	ENSMUSG00000006356.11	Crip2	chr12	protein_coding	cysteine rich protein 2
chr12	113106515	113107079	+	113104398	113107079	A5SS	0.33	50	50	ENSMUST00000200380.5	ENSMUSG00000006356.11	Crip2	chr12	protein_coding	cysteine rich protein 2
chr12	113115773	113116901	+	113110182	113116901	A5SS	0.5	50	50	ENSMUST00000198597.5	ENSMUSG00000006360.12	Crip1	chr12	protein_coding	cysteine-rich protein 1 (intestinal)
chr12	113120373	113121198	+	113120373;113120983	113120781;113121198	ES	0.5	50	50	ENSMUST00000049271.13	ENSMUSG00000037466.14	Tedc1	chr12	protein_coding	tubulin epsilon and delta complex 1
chr12	113120983	113121091	+	113120983	113121198	A3SS	0.5	50	50	ENSMUST00000049271.13	ENSMUSG00000037466.14	Tedc1	chr12	protein_coding	tubulin epsilon and delta complex 1
chr12	113120373	113121198	+	113120373	113120781	A3SS&ES	0.5	50	50	ENSMUST00000196755.5	ENSMUSG00000037466.14	Tedc1	chr12	protein_coding	tubulin epsilon and delta complex 1
chr12	113373265	113377892	-	113371541	113377892	A3SS	0.5	50	50	ENSMUST00000194162.6	ENSMUSG00000104213.6	Ighd	chr12	IG_C_gene	immunoglobulin heavy constant delta
chr12	113542427	113542565	-	113542430	113542565	A3SS	0.5	50	50	ENSMUST00000195468.6	ENSMUSG00000076633.8	Ighv5-2	chr12	IG_V_gene	immunoglobulin heavy variable 5-2
chr12	113649405	113649490	-	113649405	113649493	A5SS	0.5	50	50	ENSMUST00000103449.4	ENSMUSG00000096498.4	Ighv2-5	chr12	IG_V_gene	immunoglobulin heavy variable 2-5
chr12	113700037	113700145	-	113700034	113700145	A3SS	0.5	50	50	ENSMUST00000103452.3	ENSMUSG00000095210.3	Ighv5-9-1	chr12	IG_V_gene	immunoglobulin heavy variable 5-9-1
chr12	113760061	113760145	-	113760061	113760142	A5SS	0.5	50	50	ENSMUST00000192911.2	ENSMUSG00000076646.4	Ighv2-6-8	chr12	IG_V_gene	immunoglobulin heavy variable 2-6-8
chr12	113790572	113790696	-	113790569	113790696	A3SS	0.5	50	50	ENSMUST00000103457.3	ENSMUSG00000094134.3	Ighv5-15	chr12	IG_V_gene	immunoglobulin heavy variable 5-15
chr12	113802452	113802558	-	113802449	113802558	A3SS	0.5	50	50	ENSMUST00000103458.3	ENSMUSG00000094194.3	Ighv5-16	chr12	IG_V_gene	immunoglobulin heavy variable 5-16
chr12	113875961	113876067	-	113875961	113876064	A5SS	0.5	50	50	ENSMUST00000193133.3	ENSMUSG00000076653.5	Ighv7-2	chr12	IG_V_gene	immunoglobulin heavy variable 7-2
chr12	114140362	114140449	-	114140362	114140442	A5SS	0.5	50	50	ENSMUST00000195706.2	ENSMUSG00000076666.3	Ighv14-4	chr12	IG_V_gene	immunoglobulin heavy variable 14-4
chr12	114186724	114186829	-	114186724	114186832	A5SS	0.5	50	50	ENSMUST00000103477.4	ENSMUSG00000076668.5	Ighv7-4	chr12	IG_V_gene	immunoglobulin heavy variable 7-4
chr12	114252075	114252160	-	114252078	114252160	A3SS	0.5	50	50	ENSMUST00000195124.6	ENSMUSG00000076672.8	Ighv3-6	chr12	IG_V_gene	immunoglobulin heavy variable 3-6
chr12	114547490	114547577	-	114547493	114547577	A3SS	0.5	50	50	ENSMUST00000193893.6	ENSMUSG00000094694.7	Ighv1-9	chr12	IG_V_gene	immunoglobulin heavy variable V1-9
chr12	114579603	114579858	-	114579774	114579858	A3SS	0.5	50	50	ENSMUST00000195469.6	ENSMUSG00000095416.7	Ighv1-12	chr12	IG_V_gene	immunoglobulin heavy variable V1-12
chr12	114646553	114646640	-	114646556	114646640	A3SS	0.5	50	50	ENSMUST00000194350.6	ENSMUSG00000076695.8	Ighv1-18	chr12	IG_V_gene	immunoglobulin heavy variable V1-18
chr12	114672572	114672656	-	114672569	114672656	A3SS	0.5	50	50	ENSMUST00000103505.3	ENSMUSG00000096410.3	Ighv1-19	chr12	IG_V_gene	immunoglobulin heavy variable V1-19
chr12	114687693	114687780	-	114687696	114687780	A3SS	0.5	50	50	ENSMUST00000194968.6	ENSMUSG00000095761.7	Ighv1-20	chr12	IG_V_gene	immunoglobulin heavy variable V1-20
chr12	114843809	114843896	-	114843812	114843896	A3SS	0.5	50	50	ENSMUST00000191862.6	ENSMUSG00000094051.7	Ighv1-36	chr12	IG_V_gene	immunoglobulin heavy variable 1-36
chr12	114860159	114860246	-	114860162	114860246	A3SS	0.5	50	50	ENSMUST00000193950.6	ENSMUSG00000095923.7	Ighv1-37	chr12	IG_V_gene	immunoglobulin heavy variable 1-37
chr12	115109408	115109494	-	115109411	115109494	A3SS	0.5	50	50	ENSMUST00000192554.6	ENSMUSG00000095204.7	Ighv1-52	chr12	IG_V_gene	immunoglobulin heavy variable 1-52
chr12	115299003	115299089	-	115299006	115299089	A3SS	0.5	50	50	ENSMUST00000195359.6	ENSMUSG00000095197.7	Ighv1-59	chr12	IG_V_gene	immunoglobulin heavy variable V1-59
chr12	115587082	115587170	-	115587085	115587170	A3SS	0.5	50	50	ENSMUST00000199933.5	ENSMUSG00000094502.6	Ighv1-69	chr12	IG_V_gene	immunoglobulin heavy variable 1-69
chr12	115611875	115611962	-	115611876	115611962	A3SS	0.5	50	50	ENSMUST00000199266.2	ENSMUSG00000076731.4	Ighv8-12	chr12	IG_V_gene	immunoglobulin heavy variable V8-12
chr12	115766569	115766655	-	115766572	115766655	A3SS	0.5	50	50	ENSMUST00000196587.5	ENSMUSG00000094124.6	Ighv1-74	chr12	IG_V_gene	immunoglobulin heavy variable V1-74
chr12	116018573	116022525	+	116018468	116022525	A5SS	0.5	50	50	ENSMUST00000073551.6	ENSMUSG00000042063.12	Zfp386	chr12	protein_coding	zinc finger protein 386 (Kruppel-like)
chr12	116041513;116043567	116043514;116043653	+	116041513	116043653	cassetteExon	0.5	100	100	ENSMUST00000176078.8	ENSMUSG00000011171.12	Vipr2	chr12	protein_coding	vasoactive intestinal peptide receptor 2
chr12	116058438	116061929	+	116058438	116086331	A3SS	0.5	50	50	ENSMUST00000176078.8	ENSMUSG00000011171.12	Vipr2	chr12	protein_coding	vasoactive intestinal peptide receptor 2
chr12	116093862	116096804	+	116093862	116099729	A3SS	0.5	50	50	ENSMUST00000176078.8	ENSMUSG00000011171.12	Vipr2	chr12	protein_coding	vasoactive intestinal peptide receptor 2
chr12	116106611	116107289	+	116106611	116107757	A3SS	0.5	50	50	ENSMUST00000011315.10	ENSMUSG00000011171.12	Vipr2	chr12	protein_coding	vasoactive intestinal peptide receptor 2
chr12	116067206	116073946	-	116067206;116073654	116073264;116073946	ES	0.5	50	50	ENSMUST00000175871.8	ENSMUSG00000093765.8	Gm20658	chr12	lncRNA	predicted gene 20658
chr12	116076549	116102025	-	116074108	116102025	A3SS	0.5	50	50	ENSMUST00000175871.8	ENSMUSG00000093765.8	Gm20658	chr12	lncRNA	predicted gene 20658
chr12	116074108	116074191	-	116074108	116102025	A5SS	0.5	50	50	ENSMUST00000175871.8	ENSMUSG00000093765.8	Gm20658	chr12	lncRNA	predicted gene 20658
chr12	116221094;116226308	116226159;116226471	-	116221094	116226471	cassetteExon	0.5	100	100	ENSMUST00000039349.8	ENSMUSG00000042050.9	Dync2i1	chr12	protein_coding	dynein 2 intermediate chain 1
chr12	116201679	116205299	-	116197066	116205299	A3SS	0.5	50	50	ENSMUST00000039349.8	ENSMUSG00000042050.9	Dync2i1	chr12	protein_coding	dynein 2 intermediate chain 1
chr12	116188669	116189596	-	116188669	116189585	A5SS	0.5	50	50	ENSMUST00000039349.8	ENSMUSG00000042050.9	Dync2i1	chr12	protein_coding	dynein 2 intermediate chain 1
chr12	116311934;116317509	116317447;116320732	+	116311934	116320732	cassetteExon	0.5	100	100	ENSMUST00000100986.4	ENSMUSG00000021171.9	Esyt2	chr12	protein_coding	extended synaptotagmin-like protein 2
chr12	116297876	116303214	+	116297876	116303167	A3SS	0.5	50	50	ENSMUST00000100986.4	ENSMUSG00000021171.9	Esyt2	chr12	protein_coding	extended synaptotagmin-like protein 2
chr12	116303287	116305665	+	116303287	116305696	A3SS	0.5	50	50	ENSMUST00000100986.4	ENSMUSG00000021171.9	Esyt2	chr12	protein_coding	extended synaptotagmin-like protein 2
chr12	116282981	116284747	+	116282558	116284747	A5SS	0.5	50	50	ENSMUST00000100986.4	ENSMUSG00000021171.9	Esyt2	chr12	protein_coding	extended synaptotagmin-like protein 2
chr12	116319705	116320732	+	116311934	116320732	A5SS	0.33	50	50	ENSMUST00000100986.4	ENSMUSG00000021171.9	Esyt2	chr12	protein_coding	extended synaptotagmin-like protein 2
chr12	116317509	116320732	+	116317509;116319705	116319660;116320732	ES	0.33	50	50	ENSMUST00000220720.2	ENSMUSG00000021171.9	Esyt2	chr12	protein_coding	extended synaptotagmin-like protein 2
chr12	116369081	116370818	+	116369081;116369497	116369322;116370818	ES	0.33	50	50	ENSMUST00000084828.5	ENSMUSG00000042029.8	Ncapg2	chr12	protein_coding	non-SMC condensin II complex, subunit G2
chr12	116369111	116370818	+	116369497	116370818	A5SS&ES	0.33	50	50	ENSMUST00000084828.5	ENSMUSG00000042029.8	Ncapg2	chr12	protein_coding	non-SMC condensin II complex, subunit G2
chr12	116369081	116370818	+	116369111	116370818	A5SS	0.33	50	50	ENSMUST00000222469.2	ENSMUSG00000042029.8	Ncapg2	chr12	protein_coding	non-SMC condensin II complex, subunit G2
chr12	116369081	116370818	+	116369497	116370818	A5SS	0.33	50	50	ENSMUST00000221970.2	ENSMUSG00000042029.8	Ncapg2	chr12	protein_coding	non-SMC condensin II complex, subunit G2
chr12	116685816	116787937	+	116685816	116736390	3pMXE	0.5	50	50	ENSMUST00000185505.7	ENSMUSG00000056553.15	Ptprn2	chr12	protein_coding	protein tyrosine phosphatase, receptor type, N polypeptide 2
chr12	116986488	117010707	+	116986488	117125214	A3SS	0.5	50	50	ENSMUST00000190247.7	ENSMUSG00000056553.15	Ptprn2	chr12	protein_coding	protein tyrosine phosphatase, receptor type, N polypeptide 2
chr12	117217276	117219166	+	117217276	117219069	A3SS	0.5	50	50	ENSMUST00000190247.7	ENSMUSG00000056553.15	Ptprn2	chr12	protein_coding	protein tyrosine phosphatase, receptor type, N polypeptide 2
chr12	117248093	117300501	-	117223802	117300501	A3SS	0.5	50	50	ENSMUST00000190132.2	ENSMUSG00000101930.2	Gm5441	chr12	lncRNA	predicted gene 5441
chr12	117558927	117573473	+	117558927	117577001	A3SS	0.5	50	50	ENSMUST00000109691.4	ENSMUSG00000041992.10	Rapgef5	chr12	protein_coding	Rap guanine nucleotide exchange factor (GEF) 5
chr12	117497853	117539175	+	117490869	117539175	A5SS	0.5	50	50	ENSMUST00000109691.4	ENSMUSG00000041992.10	Rapgef5	chr12	protein_coding	Rap guanine nucleotide exchange factor (GEF) 5
chr12	117828899	117833744	+	117828899	117833741	A3SS	0.5	50	50	ENSMUST00000176499.2	ENSMUSG00000021175.16	Cdca7l	chr12	protein_coding	cell division cycle associated 7 like
chr12	117807692	117828765	+	117799313	117828765	A5SS	0.5	50	50	ENSMUST00000176499.2	ENSMUSG00000021175.16	Cdca7l	chr12	protein_coding	cell division cycle associated 7 like
chr12	117807692	117833744	+	117807692	117828765	A3SS&ES	0.5	50	50	ENSMUST00000021592.16	ENSMUSG00000021175.16	Cdca7l	chr12	protein_coding	cell division cycle associated 7 like
chr12	117807692	117833744	+	117807692;117828899	117828765;117833744	ES	0.5	50	50	ENSMUST00000176735.8	ENSMUSG00000021175.16	Cdca7l	chr12	protein_coding	cell division cycle associated 7 like
chr12	117895033	117897417	-	117895033;117896895	117896752;117897417	ES	0.5	50	50	ENSMUST00000176756.9	ENSMUSG00000018581.16	Dnah11	chr12	protein_coding	dynein, axonemal, heavy chain 11
chr12	117879342	117879589	-	117879342	117880513	A5SS	0.5	50	50	ENSMUST00000176756.9	ENSMUSG00000018581.16	Dnah11	chr12	protein_coding	dynein, axonemal, heavy chain 11
chr12	118218344	118225462	-	118218338	118225462	A3SS	0.5	50	50	ENSMUST00000026367.11	ENSMUSG00000025323.11	Sp4	chr12	protein_coding	trans-acting transcription factor 4
chr12	118264543	118264962	-	118225690	118264962	A3SS	0.5	50	50	ENSMUST00000221844.2	ENSMUSG00000025323.11	Sp4	chr12	protein_coding	trans-acting transcription factor 4
chr12	118225690	118262373	-	118225690	118264962	A5SS	0.5	50	50	ENSMUST00000221844.2	ENSMUSG00000025323.11	Sp4	chr12	protein_coding	trans-acting transcription factor 4
chr12	118811469	118812114	+	118811389	118812114	A5SS	0.5	50	50	ENSMUST00000063918.4	ENSMUSG00000048562.8	Sp8	chr12	protein_coding	trans-acting transcription factor 8
chr12	118854489	118869678	-	118854489;118865175	118865092;118869678	ES	0.5	50	50	ENSMUST00000035515.5	ENSMUSG00000072791.12	Abcb5	chr12	protein_coding	ATP-binding cassette, sub-family B (MDR/TAP), member 5
chr12	118850737	118850843	-	118850032	118850843	A3SS	0.5	50	50	ENSMUST00000035515.5	ENSMUSG00000072791.12	Abcb5	chr12	protein_coding	ATP-binding cassette, sub-family B (MDR/TAP), member 5
chr12	118883727	118888216	-	118883727	118890957	A5SS	0.5	50	50	ENSMUST00000035515.5	ENSMUSG00000072791.12	Abcb5	chr12	protein_coding	ATP-binding cassette, sub-family B (MDR/TAP), member 5
chr12	119291665;119298062	119297940;119407137	+	119291665	119407137	cassetteExon	0.5	100	100	ENSMUST00000222784.2	ENSMUSG00000041886.8	Macc1	chr12	protein_coding	metastasis associated in colon cancer 1
chr12	119354475	119407137	+	119291665	119407137	A5SS	0.25	50	50	ENSMUST00000222784.2	ENSMUSG00000041886.8	Macc1	chr12	protein_coding	metastasis associated in colon cancer 1
chr12	119356375	119407137	+	119291665	119407137	A5SS	0.25	50	50	ENSMUST00000222784.2	ENSMUSG00000041886.8	Macc1	chr12	protein_coding	metastasis associated in colon cancer 1
chr12	119354475	119407137	+	119298062	119407137	A5SS	0.25	50	50	ENSMUST00000221917.2	ENSMUSG00000041886.8	Macc1	chr12	protein_coding	metastasis associated in colon cancer 1
chr12	119356375	119407137	+	119298062	119407137	A5SS	0.25	50	50	ENSMUST00000221917.2	ENSMUSG00000041886.8	Macc1	chr12	protein_coding	metastasis associated in colon cancer 1
chr12	119356375	119407137	+	119354475	119407137	A5SS	0.25	50	50	ENSMUST00000222058.2	ENSMUSG00000041886.8	Macc1	chr12	protein_coding	metastasis associated in colon cancer 1
chr12	119910355;119971050	119970957;119974983	+	119910355	119974983	cassetteExon	0.5	100	100	ENSMUST00000058644.15	ENSMUSG00000048004.16	Tmem196	chr12	protein_coding	transmembrane protein 196
chr12	119978737;119979941	119979868;119982245	+	119978737	119982245	cassetteExon	0.5	100	100	ENSMUST00000058644.15	ENSMUSG00000048004.16	Tmem196	chr12	protein_coding	transmembrane protein 196
chr12	119910373	119974983	+	119910355	119974983	A5SS	0.33	50	50	ENSMUST00000058644.15	ENSMUSG00000048004.16	Tmem196	chr12	protein_coding	transmembrane protein 196
chr12	119971050	119974983	+	119910373	119974983	A5SS	0.33	50	50	ENSMUST00000183694.8	ENSMUSG00000048004.16	Tmem196	chr12	protein_coding	transmembrane protein 196
chr13	3171283	3171909	+	3171279	3171909	A5SS	0.5	50	50	ENSMUST00000222007.2	ENSMUSG00000091834.3	Gm17177	chr13	transcribed_unprocessed_pseudogene	predicted gene 17177
chr13	3238441	3239158	+	3236362	3239158	A5SS	0.5	50	50	ENSMUST00000223482.2	ENSMUSG00000091304.3	Speer6-ps1	chr13	transcribed_unprocessed_pseudogene	spermatogenesis associated glutamate (E)-rich protein 6, pseudogene 1
chr13	3323373;3323575	3323492;3326891	+	3323373	3326891	cassetteExon	0.5	100	100	ENSMUST00000220471.2	ENSMUSG00000113271.2	Gm40653	chr13	lncRNA	predicted gene, 40653
chr13	3323373;3323575	3323492;3330776	+	3323373;3327025	3326891;3330776	MXE	0.5	100	100	ENSMUST00000220471.2	ENSMUSG00000113271.2	Gm40653	chr13	lncRNA	predicted gene, 40653
chr13	3327025;3327155	3327114;3330776	+	3327025	3330776	cassetteExon	0.5	100	100	ENSMUST00000220471.2	ENSMUSG00000113271.2	Gm40653	chr13	lncRNA	predicted gene, 40653
chr13	3323373;3327155	3326891;3330776	+	3323373;3323575	3323492;3330776	MXE	0.5	100	100	ENSMUST00000222272.2	ENSMUSG00000113271.2	Gm40653	chr13	lncRNA	predicted gene, 40653
chr13	3323575;3327025	3326891;3330776	+	3323575	3330776	cassetteExon	0.5	100	100	ENSMUST00000222272.2	ENSMUSG00000113271.2	Gm40653	chr13	lncRNA	predicted gene, 40653
chr13	3323575;3327155	3326891;3330776	+	3323575	3330776	cassetteExon	0.5	100	100	ENSMUST00000222272.2	ENSMUSG00000113271.2	Gm40653	chr13	lncRNA	predicted gene, 40653
chr13	3530001	3535049	+	3530001	3535031	A3SS	0.5	50	50	ENSMUST00000186183.2	ENSMUSG00000097709.9	2810429I04Rik	chr13	lncRNA	RIKEN cDNA 2810429I04 gene
chr13	3528390	3529909	+	3528390;3529574	3529522;3529909	ES	0.25	50	50	ENSMUST00000187921.7	ENSMUSG00000097709.9	2810429I04Rik	chr13	lncRNA	RIKEN cDNA 2810429I04 gene
chr13	3528352	3529522	+	3528390	3529522	A5SS	0.5	50	50	ENSMUST00000187921.7	ENSMUSG00000097709.9	2810429I04Rik	chr13	lncRNA	RIKEN cDNA 2810429I04 gene
chr13	3528352	3529909	+	3529574	3529909	A5SS&ES	0.25	50	50	ENSMUST00000187921.7	ENSMUSG00000097709.9	2810429I04Rik	chr13	lncRNA	RIKEN cDNA 2810429I04 gene
chr13	3528790	3529909	+	3529574	3529909	A5SS&ES	0.25	50	50	ENSMUST00000187921.7	ENSMUSG00000097709.9	2810429I04Rik	chr13	lncRNA	RIKEN cDNA 2810429I04 gene
chr13	3528352;3529574	3529522;3529909	+	3528352	3529909	cassetteExon	0.5	100	100	ENSMUST00000189464.7	ENSMUSG00000097709.9	2810429I04Rik	chr13	lncRNA	RIKEN cDNA 2810429I04 gene
chr13	3535220	3538986	+	3535220	3547960	A3SS	0.33	50	50	ENSMUST00000189464.7	ENSMUSG00000097709.9	2810429I04Rik	chr13	lncRNA	RIKEN cDNA 2810429I04 gene
chr13	3535220	3542182	+	3535220	3547960	A3SS	0.33	50	50	ENSMUST00000189464.7	ENSMUSG00000097709.9	2810429I04Rik	chr13	lncRNA	RIKEN cDNA 2810429I04 gene
chr13	3528390	3529909	+	3528352	3529909	A5SS	0.25	50	50	ENSMUST00000189464.7	ENSMUSG00000097709.9	2810429I04Rik	chr13	lncRNA	RIKEN cDNA 2810429I04 gene
chr13	3528790	3529909	+	3528352	3529909	A5SS	0.25	50	50	ENSMUST00000189464.7	ENSMUSG00000097709.9	2810429I04Rik	chr13	lncRNA	RIKEN cDNA 2810429I04 gene
chr13	3535220	3542182	+	3535220	3538986	3pMXE	0.33	50	50	ENSMUST00000191585.7	ENSMUSG00000097709.9	2810429I04Rik	chr13	lncRNA	RIKEN cDNA 2810429I04 gene
chr13	3528390	3529909	+	3528790	3529909	A5SS	0.25	50	50	ENSMUST00000186642.7	ENSMUSG00000097709.9	2810429I04Rik	chr13	lncRNA	RIKEN cDNA 2810429I04 gene
chr13	3528390	3529909	+	3529574	3529909	A5SS&ES	0.25	50	50	ENSMUST00000185835.7	ENSMUSG00000097709.9	2810429I04Rik	chr13	lncRNA	RIKEN cDNA 2810429I04 gene
chr13	3588343	3600989	+	3588343;3598970	3598863;3600989	ES	0.5	50	50	ENSMUST00000223396.2	ENSMUSG00000021218.11	Gdi2	chr13	protein_coding	guanosine diphosphate (GDP) dissociation inhibitor 2
chr13	3598970	3604412	+	3598970;3601088	3600989;3604412	ES	0.5	50	50	ENSMUST00000223396.2	ENSMUSG00000021218.11	Gdi2	chr13	protein_coding	guanosine diphosphate (GDP) dissociation inhibitor 2
chr13	3588343;3598549	3598514;3598863	+	3588343	3598863	cassetteExon	0.5	100	100	ENSMUST00000223396.2	ENSMUSG00000021218.11	Gdi2	chr13	protein_coding	guanosine diphosphate (GDP) dissociation inhibitor 2
chr13	3601088	3604442	+	3601088	3604412	A3SS	0.5	50	50	ENSMUST00000223396.2	ENSMUSG00000021218.11	Gdi2	chr13	protein_coding	guanosine diphosphate (GDP) dissociation inhibitor 2
chr13	3610091	3610253	+	3610091	3611866	A3SS	0.5	50	50	ENSMUST00000223396.2	ENSMUSG00000021218.11	Gdi2	chr13	protein_coding	guanosine diphosphate (GDP) dissociation inhibitor 2
chr13	3588751	3598863	+	3588343	3598863	A5SS	0.33	50	50	ENSMUST00000223396.2	ENSMUSG00000021218.11	Gdi2	chr13	protein_coding	guanosine diphosphate (GDP) dissociation inhibitor 2
chr13	3588343;3601088	3600989;3604412	+	3588343;3598970	3598863;3604412	MXE	0.5	100	100	ENSMUST00000221575.2	ENSMUSG00000021218.11	Gdi2	chr13	protein_coding	guanosine diphosphate (GDP) dissociation inhibitor 2
chr13	3588343;3598970	3598514;3600989	+	3588343	3600989	cassetteExon	0.5	100	100	ENSMUST00000059515.8	ENSMUSG00000021218.11	Gdi2	chr13	protein_coding	guanosine diphosphate (GDP) dissociation inhibitor 2
chr13	3588343;3598970	3598514;3604412	+	3588343;3601088	3600989;3604412	MXE	0.5	100	100	ENSMUST00000059515.8	ENSMUSG00000021218.11	Gdi2	chr13	protein_coding	guanosine diphosphate (GDP) dissociation inhibitor 2
chr13	3598970	3604412	+	3598970	3600989	3pMXE	0.5	50	50	ENSMUST00000221348.2	ENSMUSG00000021218.11	Gdi2	chr13	protein_coding	guanosine diphosphate (GDP) dissociation inhibitor 2
chr13	3588751	3598863	+	3598549	3598863	A5SS&ES	0.33	50	50	ENSMUST00000221348.2	ENSMUSG00000021218.11	Gdi2	chr13	protein_coding	guanosine diphosphate (GDP) dissociation inhibitor 2
chr13	3617032	3618752	-	3617032;3617617	3617436;3618752	ES	0.5	50	50	ENSMUST00000096069.5	ENSMUSG00000033799.11	Tasor2	chr13	protein_coding	transcription activation suppressor family member 2
chr13	3627200	3632082	-	3627200	3631752	A5SS	0.5	50	50	ENSMUST00000096069.5	ENSMUSG00000033799.11	Tasor2	chr13	protein_coding	transcription activation suppressor family member 2
chr13	3617032	3618752	-	3617032	3617436	5pMXE	0.5	50	50	ENSMUST00000221629.2	ENSMUSG00000033799.11	Tasor2	chr13	protein_coding	transcription activation suppressor family member 2
chr13	3684175	3684414	+	3684175	3692065	A3SS	0.33	50	50	ENSMUST00000042288.8	ENSMUSG00000033781.8	Asb13	chr13	protein_coding	ankyrin repeat and SOCS box-containing 13
chr13	3699374	3700180	+	3699510	3700180	A5SS	0.5	50	50	ENSMUST00000042288.8	ENSMUSG00000033781.8	Asb13	chr13	protein_coding	ankyrin repeat and SOCS box-containing 13
chr13	3684175	3694916	+	3684175	3684414	3pMXE	0.33	50	50	ENSMUST00000156595.2	ENSMUSG00000033781.8	Asb13	chr13	protein_coding	ankyrin repeat and SOCS box-containing 13
chr13	3684175	3692065	+	3684175	3694916	A3SS	0.33	50	50	ENSMUST00000141147.2	ENSMUSG00000033781.8	Asb13	chr13	protein_coding	ankyrin repeat and SOCS box-containing 13
chr13	3693625	3694916	+	3684175	3694916	A5SS	0.5	50	50	ENSMUST00000141147.2	ENSMUSG00000033781.8	Asb13	chr13	protein_coding	ankyrin repeat and SOCS box-containing 13
chr13	3938978	3957797	-	3938978	3943293	5pMXE	0.5	50	50	ENSMUST00000099946.6	ENSMUSG00000021215.16	Net1	chr13	protein_coding	neuroepithelial cell transforming gene 1
chr13	3932995	3943293	-	3938978	3943293	A3SS&ES	0.5	50	50	ENSMUST00000099946.6	ENSMUSG00000021215.16	Net1	chr13	protein_coding	neuroepithelial cell transforming gene 1
chr13	3967664	3967938	-	3962934	3967938	A3SS	0.5	50	50	ENSMUST00000091853.12	ENSMUSG00000021215.16	Net1	chr13	protein_coding	neuroepithelial cell transforming gene 1
chr13	3974737	3978089	+	3968332	3978089	A5SS	0.5	50	50	ENSMUST00000223035.2	ENSMUSG00000021216.8	Tubal3	chr13	protein_coding	tubulin, alpha-like 3
chr13	4099132	4101207	+	4098866	4101207	A5SS	0.5	50	50	ENSMUST00000210421.2	ENSMUSG00000110055.2	Gm18857	chr13	unprocessed_pseudogene	predicted gene, 18857
chr13	4128309	4129054	+	4128047	4129054	A5SS	0.5	50	50	ENSMUST00000118717.10	ENSMUSG00000033715.16	Akr1c14	chr13	protein_coding	aldo-keto reductase family 1, member C14
chr13	4192248;4193294	4193217;4194289	-	4192248	4194289	cassetteExon	0.5	100	100	ENSMUST00000110704.9	ENSMUSG00000021214.15	Akr1c18	chr13	protein_coding	aldo-keto reductase family 1, member C18
chr13	4241309;4242434	4242294;4244033	+	4241309	4244033	cassetteExon	0.5	100	100	ENSMUST00000021634.4	ENSMUSG00000021213.13	Akr1c13	chr13	protein_coding	aldo-keto reductase family 1, member C13
chr13	4243887	4244033	+	4241309	4244033	A5SS	0.33	50	50	ENSMUST00000021634.4	ENSMUSG00000021213.13	Akr1c13	chr13	protein_coding	aldo-keto reductase family 1, member C13
chr13	4243887	4244033	+	4242434	4244033	A5SS	0.33	50	50	ENSMUST00000128892.8	ENSMUSG00000021213.13	Akr1c13	chr13	protein_coding	aldo-keto reductase family 1, member C13
chr13	4295386	4296802	+	4293091	4296802	A5SS	0.5	50	50	ENSMUST00000118663.9	ENSMUSG00000071551.14	Akr1c19	chr13	protein_coding	aldo-keto reductase family 1, member C19
chr13	4429486;4432699	4432532;4441136	-	4429486	4441136	cassetteExon	0.5	100	100	ENSMUST00000221569.2	ENSMUSG00000113175.2	Gm9973	chr13	transcribed_unprocessed_pseudogene	predicted gene 9973
chr13	4429486	4430807	-	4429486	4441136	A5SS	0.33	50	50	ENSMUST00000221569.2	ENSMUSG00000113175.2	Gm9973	chr13	transcribed_unprocessed_pseudogene	predicted gene 9973
chr13	4429486	4430807	-	4429486	4432532	A5SS	0.33	50	50	ENSMUST00000223449.2	ENSMUSG00000113175.2	Gm9973	chr13	transcribed_unprocessed_pseudogene	predicted gene 9973
chr13	4504545	4507693	+	4504545	4507148	3pMXE	0.5	50	50	ENSMUST00000021630.15	ENSMUSG00000021210.17	Akr1c6	chr13	protein_coding	aldo-keto reductase family 1, member C6
chr13	4484473	4484727	+	4484473	4486279	A3SS	0.5	50	50	ENSMUST00000021630.15	ENSMUSG00000021210.17	Akr1c6	chr13	protein_coding	aldo-keto reductase family 1, member C6
chr13	4486446	4497032	+	4486446	4488489	A3SS&ES	0.5	50	50	ENSMUST00000021630.15	ENSMUSG00000021210.17	Akr1c6	chr13	protein_coding	aldo-keto reductase family 1, member C6
chr13	4561282	4562666	-	4561282	4562585	A5SS	0.5	50	50	ENSMUST00000080361.13	ENSMUSG00000054757.15	Akr1c20	chr13	protein_coding	aldo-keto reductase family 1, member C20
chr13	4627477;4629832	4629737;4630279	+	4627477	4630279	cassetteExon	0.5	100	100	ENSMUST00000021628.4	ENSMUSG00000021207.10	Akr1c21	chr13	protein_coding	aldo-keto reductase family 1, member C21
chr13	4652796	4659084	-	4652796;4657557	4657390;4659084	ES	0.5	50	50	ENSMUST00000091848.7	ENSMUSG00000045410.19	Akr1e1	chr13	protein_coding	aldo-keto reductase family 1, member E1
chr13	4651352	4652680	-	4651294	4652680	A3SS	0.5	50	50	ENSMUST00000091848.7	ENSMUSG00000045410.19	Akr1e1	chr13	protein_coding	aldo-keto reductase family 1, member E1
chr13	4657202	4657390	-	4652796	4657390	A3SS	0.5	50	50	ENSMUST00000091848.7	ENSMUSG00000045410.19	Akr1e1	chr13	protein_coding	aldo-keto reductase family 1, member E1
chr13	4659945	4664147	+	4659490	4664147	A5SS	0.5	50	50	ENSMUST00000222043.2	ENSMUSG00000094772.3	Rpl29-ps2	chr13	transcribed_processed_pseudogene	ribosomal protein L29, pseudogene 2
chr13	4795533;4797061	4796951;4798920	+	4795533	4798920	cassetteExon	0.5	100	100	ENSMUST00000221900.2	ENSMUSG00000113717.2	Gm40658	chr13	lncRNA	predicted gene, 40658
chr13	4776000	4792302	+	4753020	4792302	A5SS	0.33	50	50	ENSMUST00000221900.2	ENSMUSG00000113717.2	Gm40658	chr13	lncRNA	predicted gene, 40658
chr13	4789879	4792302	+	4753020	4792302	A5SS	0.33	50	50	ENSMUST00000221900.2	ENSMUSG00000113717.2	Gm40658	chr13	lncRNA	predicted gene, 40658
chr13	4776000;4789879	4789716;4792302	+	4776000	4792302	cassetteExon	0.5	100	100	ENSMUST00000220455.2	ENSMUSG00000113717.2	Gm40658	chr13	lncRNA	predicted gene, 40658
chr13	5520287	5558743	+	5520287	5549373	3pMXE	0.33	50	50	ENSMUST00000220659.2	ENSMUSG00000114098.2	Gm40660	chr13	lncRNA	predicted gene, 40660
chr13	5520287	5603389	+	5520287	5549373	3pMXE	0.33	50	50	ENSMUST00000220659.2	ENSMUSG00000114098.2	Gm40660	chr13	lncRNA	predicted gene, 40660
chr13	5520287	5603389	+	5520287	5558743	3pMXE	0.33	50	50	ENSMUST00000220493.2	ENSMUSG00000114098.2	Gm40660	chr13	lncRNA	predicted gene, 40660
chr13	5662070	5688844	-	5591983	5688844	A3SS	0.33	50	50	ENSMUST00000222871.2	ENSMUSG00000114053.2	Gm35330	chr13	lncRNA	predicted gene, 35330
chr13	5673413	5688844	-	5591983	5688844	A3SS	0.33	50	50	ENSMUST00000222871.2	ENSMUSG00000114053.2	Gm35330	chr13	lncRNA	predicted gene, 35330
chr13	5753509	5774398	-	5688950	5774398	A3SS	0.5	50	50	ENSMUST00000222871.2	ENSMUSG00000114053.2	Gm35330	chr13	lncRNA	predicted gene, 35330
chr13	5688950	5752479	-	5688950	5774398	A5SS	0.5	50	50	ENSMUST00000222871.2	ENSMUSG00000114053.2	Gm35330	chr13	lncRNA	predicted gene, 35330
chr13	5592036	5599823	-	5592036	5621106	A5SS	0.5	50	50	ENSMUST00000223426.2	ENSMUSG00000114053.2	Gm35330	chr13	lncRNA	predicted gene, 35330
chr13	5662070	5688844	-	5662070;5673413	5673384;5688844	ES	0.5	50	50	ENSMUST00000220830.2	ENSMUSG00000114053.2	Gm35330	chr13	lncRNA	predicted gene, 35330
chr13	5662070	5688844	-	5673413	5688844	3pMXE	0.33	50	50	ENSMUST00000223254.2	ENSMUSG00000114053.2	Gm35330	chr13	lncRNA	predicted gene, 35330
chr13	5905950	5906850	-	5905950	5907612	A5SS	0.5	50	50	ENSMUST00000186819.7	ENSMUSG00000100625.8	1700016G22Rik	chr13	lncRNA	RIKEN cDNA 1700016G22 gene
chr13	5906905	5907515	-	5906905	5907998	A5SS	0.5	50	50	ENSMUST00000186843.2	ENSMUSG00000100625.8	1700016G22Rik	chr13	lncRNA	RIKEN cDNA 1700016G22 gene
chr13	5911841;5913624	5913557;5914767	+	5911841	5914767	cassetteExon	0.5	100	100	ENSMUST00000000080.8	ENSMUSG00000000078.8	Klf6	chr13	protein_coding	Kruppel-like factor 6
chr13	6446426	6447295	+	6445994	6447295	A5SS	0.5	50	50	ENSMUST00000190368.2	ENSMUSG00000101540.3	Gm28465	chr13	lncRNA	predicted gene 28465
chr13	6609519;6610179	6610066;6610638	+	6609519	6610638	cassetteExon	0.5	100	100	ENSMUST00000021611.10	ENSMUSG00000021193.11	Pitrm1	chr13	protein_coding	pitrilysin metallepetidase 1
chr13	6598265	6599616	+	6598265	6599619	A3SS	0.5	50	50	ENSMUST00000021611.10	ENSMUSG00000021193.11	Pitrm1	chr13	protein_coding	pitrilysin metallepetidase 1
chr13	6603369	6605394	+	6603369	6605390	A3SS	0.5	50	50	ENSMUST00000021611.10	ENSMUSG00000021193.11	Pitrm1	chr13	protein_coding	pitrilysin metallepetidase 1
chr13	6598311	6599619	+	6598265	6599619	A5SS	0.5	50	50	ENSMUST00000021611.10	ENSMUSG00000021193.11	Pitrm1	chr13	protein_coding	pitrilysin metallepetidase 1
chr13	6599794	6602670	+	6599718	6602670	A5SS	0.5	50	50	ENSMUST00000021611.10	ENSMUSG00000021193.11	Pitrm1	chr13	protein_coding	pitrilysin metallepetidase 1
chr13	6598311	6599616	+	6598265	6599616	A5SS	0.5	50	50	ENSMUST00000222485.2	ENSMUSG00000021193.11	Pitrm1	chr13	protein_coding	pitrilysin metallepetidase 1
chr13	6598311	6599616	+	6598311	6599619	A3SS	0.5	50	50	ENSMUST00000221120.2	ENSMUSG00000021193.11	Pitrm1	chr13	protein_coding	pitrilysin metallepetidase 1
chr13	6634736;6635308	6635243;6636516	-	6634736	6636516	cassetteExon	0.5	100	100	ENSMUST00000131648.8	ENSMUSG00000021196.15	Pfkp	chr13	protein_coding	phosphofructokinase, platelet
chr13	6638689;6643289	6643137;6648775	-	6638689;6648047	6647895;6648775	MXE	0.5	100	100	ENSMUST00000138703.8	ENSMUSG00000021196.15	Pfkp	chr13	protein_coding	phosphofructokinase, platelet
chr13	6638689;6645053	6644999;6647895	-	6638689	6647895	cassetteExon	0.5	100	100	ENSMUST00000138703.8	ENSMUSG00000021196.15	Pfkp	chr13	protein_coding	phosphofructokinase, platelet
chr13	6646094	6647895	-	6638689	6647895	A3SS	0.33	50	50	ENSMUST00000138703.8	ENSMUSG00000021196.15	Pfkp	chr13	protein_coding	phosphofructokinase, platelet
chr13	6646098	6648775	-	6648047	6648775	A3SS&ES	0.33	50	50	ENSMUST00000138703.8	ENSMUSG00000021196.15	Pfkp	chr13	protein_coding	phosphofructokinase, platelet
chr13	6686034	6686562	-	6686034	6698607	A5SS	0.5	50	50	ENSMUST00000138703.8	ENSMUSG00000021196.15	Pfkp	chr13	protein_coding	phosphofructokinase, platelet
chr13	6646098	6648775	-	6643289	6648775	A3SS	0.33	50	50	ENSMUST00000021614.14	ENSMUSG00000021196.15	Pfkp	chr13	protein_coding	phosphofructokinase, platelet
chr13	6638689	6644999	-	6638689	6643137	A5SS&ES	0.33	50	50	ENSMUST00000021614.14	ENSMUSG00000021196.15	Pfkp	chr13	protein_coding	phosphofructokinase, platelet
chr13	6638689	6644999	-	6638689;6643200	6643137;6644999	ES	0.5	50	50	ENSMUST00000154100.8	ENSMUSG00000021196.15	Pfkp	chr13	protein_coding	phosphofructokinase, platelet
chr13	6645053	6647895	-	6646094	6647895	A3SS&ES	0.33	50	50	ENSMUST00000154100.8	ENSMUSG00000021196.15	Pfkp	chr13	protein_coding	phosphofructokinase, platelet
chr13	6638689;6643289	6643137;6648775	-	6638689;6648047	6644999;6648775	MXE	0.5	100	100	ENSMUST00000133041.8	ENSMUSG00000021196.15	Pfkp	chr13	protein_coding	phosphofructokinase, platelet
chr13	7058773	7113347	-	7047951	7113347	A3SS	0.5	50	50	ENSMUST00000222263.2	ENSMUSG00000114017.2	Gm40662	chr13	lncRNA	predicted gene, 40662
chr13	7204830	7210257	-	7189573	7210257	A3SS	0.5	50	50	ENSMUST00000222463.2	ENSMUSG00000113241.2	Gm40663	chr13	lncRNA	predicted gene, 40663
chr13	8253356	8389661	+	8253356	8609140	A3SS	0.5	50	50	ENSMUST00000064473.13	ENSMUSG00000052551.17	Adarb2	chr13	protein_coding	adenosine deaminase, RNA-specific, B2
chr13	8802782	8807262	+	8802787	8807262	A5SS	0.5	50	50	ENSMUST00000064473.13	ENSMUSG00000052551.17	Adarb2	chr13	protein_coding	adenosine deaminase, RNA-specific, B2
chr13	8885474	8892766	-	8885474;8887059	8886819;8892766	ES	0.33	50	50	ENSMUST00000054251.13	ENSMUSG00000021147.18	Wdr37	chr13	protein_coding	WD repeat domain 37
chr13	8904131	8911124	-	8904131;8906964	8906868;8911124	ES	0.5	50	50	ENSMUST00000054251.13	ENSMUSG00000021147.18	Wdr37	chr13	protein_coding	WD repeat domain 37
chr13	8903013	8903706	-	8899705	8903706	A3SS	0.5	50	50	ENSMUST00000054251.13	ENSMUSG00000021147.18	Wdr37	chr13	protein_coding	WD repeat domain 37
chr13	8906964	8908656	-	8906964	8911124	A5SS	0.25	50	50	ENSMUST00000054251.13	ENSMUSG00000021147.18	Wdr37	chr13	protein_coding	WD repeat domain 37
chr13	8906964	8908729	-	8906964	8911124	A5SS	0.25	50	50	ENSMUST00000054251.13	ENSMUSG00000021147.18	Wdr37	chr13	protein_coding	WD repeat domain 37
chr13	8906964	8920906	-	8906964	8911124	A5SS&ES	0.25	50	50	ENSMUST00000054251.13	ENSMUSG00000021147.18	Wdr37	chr13	protein_coding	WD repeat domain 37
chr13	8911301	8920673	-	8911301	8921519	A5SS	0.33	50	50	ENSMUST00000054251.13	ENSMUSG00000021147.18	Wdr37	chr13	protein_coding	WD repeat domain 37
chr13	8911301	8920906	-	8911301	8921519	A5SS	0.33	50	50	ENSMUST00000054251.13	ENSMUSG00000021147.18	Wdr37	chr13	protein_coding	WD repeat domain 37
chr13	8906964	8920906	-	8906964;8911301	8911124;8920906	ES	0.33	50	50	ENSMUST00000021572.11	ENSMUSG00000021147.18	Wdr37	chr13	protein_coding	WD repeat domain 37
chr13	8911301;8920752	8920673;8920906	-	8911301	8920906	cassetteExon	0.5	100	100	ENSMUST00000021572.11	ENSMUSG00000021147.18	Wdr37	chr13	protein_coding	WD repeat domain 37
chr13	8870581;8885474	8885333;8892766	-	8870581	8892766	cassetteExon	0.5	100	100	ENSMUST00000177537.8	ENSMUSG00000021147.18	Wdr37	chr13	protein_coding	WD repeat domain 37
chr13	8870581;8885474	8885333;8897651	-	8870581;8894867	8892766;8897651	MXE	0.5	100	100	ENSMUST00000177537.8	ENSMUSG00000021147.18	Wdr37	chr13	protein_coding	WD repeat domain 37
chr13	8887059	8892766	-	8870581	8892766	A3SS	0.33	50	50	ENSMUST00000177537.8	ENSMUSG00000021147.18	Wdr37	chr13	protein_coding	WD repeat domain 37
chr13	8894867	8897651	-	8885474	8897651	A3SS	0.5	50	50	ENSMUST00000176429.8	ENSMUSG00000021147.18	Wdr37	chr13	protein_coding	WD repeat domain 37
chr13	8870581	8892766	-	8870581	8885333	A5SS&ES	0.5	50	50	ENSMUST00000176429.8	ENSMUSG00000021147.18	Wdr37	chr13	protein_coding	WD repeat domain 37
chr13	8885474	8886819	-	8885474	8897651	A5SS	0.33	50	50	ENSMUST00000176429.8	ENSMUSG00000021147.18	Wdr37	chr13	protein_coding	WD repeat domain 37
chr13	8885474	8892766	-	8885474	8897651	A5SS	0.33	50	50	ENSMUST00000176429.8	ENSMUSG00000021147.18	Wdr37	chr13	protein_coding	WD repeat domain 37
chr13	8885474	8892766	-	8885474	8886819	5pMXE	0.33	50	50	ENSMUST00000177409.2	ENSMUSG00000021147.18	Wdr37	chr13	protein_coding	WD repeat domain 37
chr13	8906964	8920906	-	8906964	8908656	5pMXE	0.25	50	50	ENSMUST00000176329.8	ENSMUSG00000021147.18	Wdr37	chr13	protein_coding	WD repeat domain 37
chr13	8906964	8908729	-	8906964	8908656	A5SS	0.25	50	50	ENSMUST00000176329.8	ENSMUSG00000021147.18	Wdr37	chr13	protein_coding	WD repeat domain 37
chr13	8911301	8920906	-	8911301	8920673	A5SS	0.33	50	50	ENSMUST00000164183.9	ENSMUSG00000021147.18	Wdr37	chr13	protein_coding	WD repeat domain 37
chr13	8904131;8911301	8911124;8920906	-	8904131;8906964	8906868;8920906	MXE	0.5	100	100	ENSMUST00000177112.8	ENSMUSG00000021147.18	Wdr37	chr13	protein_coding	WD repeat domain 37
chr13	8920752	8920906	-	8906964	8920906	A3SS	0.33	50	50	ENSMUST00000177112.8	ENSMUSG00000021147.18	Wdr37	chr13	protein_coding	WD repeat domain 37
chr13	8906964	8908729	-	8906964	8920906	A5SS	0.25	50	50	ENSMUST00000177112.8	ENSMUSG00000021147.18	Wdr37	chr13	protein_coding	WD repeat domain 37
chr13	8904131	8911124	-	8906964	8911124	3pMXE	0.5	50	50	ENSMUST00000175958.2	ENSMUSG00000021147.18	Wdr37	chr13	protein_coding	WD repeat domain 37
chr13	8938134	8940354	+	8938089	8940354	A5SS	0.33	50	50	ENSMUST00000169314.9	ENSMUSG00000058258.15	Idi1	chr13	protein_coding	isopentenyl-diphosphate delta isomerase
chr13	8938151	8940354	+	8938089	8940354	A5SS	0.33	50	50	ENSMUST00000169314.9	ENSMUSG00000058258.15	Idi1	chr13	protein_coding	isopentenyl-diphosphate delta isomerase
chr13	8938151	8940354	+	8938134	8940354	A5SS	0.33	50	50	ENSMUST00000177397.8	ENSMUSG00000058258.15	Idi1	chr13	protein_coding	isopentenyl-diphosphate delta isomerase
chr13	9042071	9045985	-	9042071;9042851	9042681;9045985	ES	0.5	50	50	ENSMUST00000222098.2	ENSMUSG00000021149.9	Gtpbp4	chr13	protein_coding	GTP binding protein 4
chr13	9034923	9035245	-	9030015	9035245	A3SS	0.5	50	50	ENSMUST00000222098.2	ENSMUSG00000021149.9	Gtpbp4	chr13	protein_coding	GTP binding protein 4
chr13	9037995	9039089	-	9037983	9039089	A3SS	0.5	50	50	ENSMUST00000222098.2	ENSMUSG00000021149.9	Gtpbp4	chr13	protein_coding	GTP binding protein 4
chr13	9058475	9124175	-	9052153	9124175	A3SS	0.5	50	50	ENSMUST00000221672.2	ENSMUSG00000113543.2	Gm36264	chr13	lncRNA	predicted gene, 36264
chr13	9052153	9055509	-	9052153	9124175	A5SS	0.5	50	50	ENSMUST00000221672.2	ENSMUSG00000113543.2	Gm36264	chr13	lncRNA	predicted gene, 36264
chr13	9208265	9214711	+	9208265;9208838	9208587;9214711	ES	0.5	50	50	ENSMUST00000188211.8	ENSMUSG00000033499.15	Larp4b	chr13	protein_coding	La ribonucleoprotein domain family, member 4B
chr13	9144216;9168141	9168002;9172144	+	9144216	9172144	cassetteExon	0.5	100	100	ENSMUST00000188211.8	ENSMUSG00000033499.15	Larp4b	chr13	protein_coding	La ribonucleoprotein domain family, member 4B
chr13	9186328	9186815	+	9173998	9186815	A5SS	0.33	50	50	ENSMUST00000188211.8	ENSMUSG00000033499.15	Larp4b	chr13	protein_coding	La ribonucleoprotein domain family, member 4B
chr13	9186681	9186815	+	9173998	9186815	A5SS	0.33	50	50	ENSMUST00000188211.8	ENSMUSG00000033499.15	Larp4b	chr13	protein_coding	La ribonucleoprotein domain family, member 4B
chr13	9216517;9219042	9218714;9220688	+	9216517	9220688	cassetteExon	0.5	100	100	ENSMUST00000188939.7	ENSMUSG00000033499.15	Larp4b	chr13	protein_coding	La ribonucleoprotein domain family, member 4B
chr13	9186681	9186815	+	9186328	9186815	A5SS	0.33	50	50	ENSMUST00000188523.7	ENSMUSG00000033499.15	Larp4b	chr13	protein_coding	La ribonucleoprotein domain family, member 4B
chr13	9543212;9545037	9544870;9556615	+	9543212	9556615	cassetteExon	0.5	100	100	ENSMUST00000174552.8	ENSMUSG00000048264.17	Dip2c	chr13	protein_coding	disco interacting protein 2 homolog C
chr13	9621150	9626881	+	9621150	9625170	A3SS&ES	0.5	50	50	ENSMUST00000174552.8	ENSMUSG00000048264.17	Dip2c	chr13	protein_coding	disco interacting protein 2 homolog C
chr13	9626954	9634041	+	9626954	9651393	A3SS	0.5	50	50	ENSMUST00000174552.8	ENSMUSG00000048264.17	Dip2c	chr13	protein_coding	disco interacting protein 2 homolog C
chr13	9664504	9665781	+	9664492	9665781	A5SS	0.5	50	50	ENSMUST00000174552.8	ENSMUSG00000048264.17	Dip2c	chr13	protein_coding	disco interacting protein 2 homolog C
chr13	9739056	9739278	+	9735256	9739278	A5SS	0.5	50	50	ENSMUST00000222215.2	ENSMUSG00000114138.2	Gm36423	chr13	lncRNA	predicted gene, 36423
chr13	9734477	9735165	+	9734401	9735165	A5SS	0.5	50	50	ENSMUST00000221492.2	ENSMUSG00000114138.2	Gm36423	chr13	lncRNA	predicted gene, 36423
chr13	9745862	9748664	-	9745862;9747772	9747680;9748664	ES	0.5	50	50	ENSMUST00000110636.9	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9748741	9770809	-	9748741;9760343	9760182;9770809	ES	0.25	50	50	ENSMUST00000110636.9	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9760343	9785368	-	9760343;9770968	9770809;9785368	ES	0.33	50	50	ENSMUST00000110636.9	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9748741;9758946	9758623;9760182	-	9748741	9760182	cassetteExon	0.5	100	100	ENSMUST00000110636.9	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9760343;9763063	9763019;9770809	-	9760343	9770809	cassetteExon	0.5	100	100	ENSMUST00000110636.9	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9770968;9772728	9772565;9785368	-	9770968	9785368	cassetteExon	0.5	100	100	ENSMUST00000110636.9	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9745217	9745775	-	9745220	9745775	A3SS	0.5	50	50	ENSMUST00000110636.9	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9739760	9740314	-	9739760	9740482	A5SS	0.5	50	50	ENSMUST00000110636.9	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9770968	9814382	-	9770968	9785368	A5SS&ES	0.33	50	50	ENSMUST00000110636.9	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9785502	9785690	-	9785502	9815091	A5SS	0.2	50	50	ENSMUST00000110636.9	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9785502	9814382	-	9785502	9815091	A5SS	0.2	50	50	ENSMUST00000110636.9	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9785502	9814764	-	9785502	9815091	A5SS	0.2	50	50	ENSMUST00000110636.9	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9785502	9815197	-	9785502	9815091	A5SS	0.2	50	50	ENSMUST00000110636.9	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9770968	9814382	-	9770968;9785502	9785368;9814382	ES	0.5	50	50	ENSMUST00000110637.8	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9785502	9814764	-	9785502	9814382	5pMXE	0.2	50	50	ENSMUST00000110637.8	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9785502	9815197	-	9785502	9814382	5pMXE	0.2	50	50	ENSMUST00000110637.8	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9748741;9760343	9760182;9785368	-	9748741;9770968	9770809;9785368	MXE	0.5	100	100	ENSMUST00000110637.8	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9763063	9770809	-	9748741	9770809	A3SS	0.25	50	50	ENSMUST00000110637.8	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9748741	9758623	-	9748741	9770809	A5SS	0.33	50	50	ENSMUST00000110637.8	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9785502	9785690	-	9785502	9814382	A5SS	0.2	50	50	ENSMUST00000110637.8	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9785502	9815197	-	9785502	9814764	5pMXE	0.2	50	50	ENSMUST00000110634.8	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9785502	9785690	-	9785502	9814764	A5SS	0.2	50	50	ENSMUST00000110634.8	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9760343	9785368	-	9760343	9770809	5pMXE	0.33	50	50	ENSMUST00000110633.8	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9748741	9770809	-	9741146	9770809	A3SS	0.25	50	50	ENSMUST00000220996.2	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9760343	9770809	-	9741146	9770809	A3SS	0.25	50	50	ENSMUST00000220996.2	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9760343	9785368	-	9770968	9785368	A3SS&ES	0.33	50	50	ENSMUST00000220996.2	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9763063	9770809	-	9741146	9770809	A3SS	0.25	50	50	ENSMUST00000220996.2	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9741146	9743466	-	9741146	9770809	A5SS	0.5	50	50	ENSMUST00000220996.2	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9770968	9814382	-	9770968	9772565	A5SS&ES	0.33	50	50	ENSMUST00000157035.9	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9785502	9785690	-	9785502	9815197	A5SS	0.2	50	50	ENSMUST00000157035.9	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9745862	9748664	-	9747772	9748664	3pMXE	0.5	50	50	ENSMUST00000128658.8	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9772728	9785368	-	9760343	9785368	A3SS	0.33	50	50	ENSMUST00000222358.2	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9760343	9763019	-	9760343	9785368	A5SS	0.33	50	50	ENSMUST00000222358.2	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9748741	9770809	-	9760343	9770809	3pMXE	0.25	50	50	ENSMUST00000146039.2	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	9760343;9785502	9785368;9814382	-	9760343;9770968	9770809;9814382	MXE	0.5	100	100	ENSMUST00000146039.2	ENSMUSG00000021156.18	Zmynd11	chr13	protein_coding	zinc finger, MYND domain containing 11
chr13	10265900	10274681	-	10172325	10274681	A3SS	0.5	50	50	ENSMUST00000187510.7	ENSMUSG00000046159.17	Chrm3	chr13	protein_coding	cholinergic receptor, muscarinic 3, cardiac
chr13	10606426	10652819	+	10421884	10652819	A5SS	0.33	50	50	ENSMUST00000180807.3	ENSMUSG00000097009.3	Gm26861	chr13	lncRNA	predicted gene, 26861
chr13	10606722	10652819	+	10421884	10652819	A5SS	0.33	50	50	ENSMUST00000180807.3	ENSMUSG00000097009.3	Gm26861	chr13	lncRNA	predicted gene, 26861
chr13	10606722	10702627	+	10653056	10702627	A5SS&ES	0.5	50	50	ENSMUST00000180807.3	ENSMUSG00000097009.3	Gm26861	chr13	lncRNA	predicted gene, 26861
chr13	10726472	10775134	+	10726472	10726651	3pMXE	0.33	50	50	ENSMUST00000222066.2	ENSMUSG00000097009.3	Gm26861	chr13	lncRNA	predicted gene, 26861
chr13	10726472	10781243	+	10726472	10726651	3pMXE	0.33	50	50	ENSMUST00000222066.2	ENSMUSG00000097009.3	Gm26861	chr13	lncRNA	predicted gene, 26861
chr13	10606722;10653056	10652819;10702627	+	10606722	10702627	cassetteExon	0.5	100	100	ENSMUST00000222066.2	ENSMUSG00000097009.3	Gm26861	chr13	lncRNA	predicted gene, 26861
chr13	10604779	10606383	+	10604779	10606530	A3SS	0.5	50	50	ENSMUST00000222066.2	ENSMUSG00000097009.3	Gm26861	chr13	lncRNA	predicted gene, 26861
chr13	10604779;10606426	10606383;10652819	+	10604779;10606722	10606530;10652819	MXE	0.5	100	100	ENSMUST00000221649.2	ENSMUSG00000097009.3	Gm26861	chr13	lncRNA	predicted gene, 26861
chr13	10784990	10846935	+	10784990	10789732	3pMXE	0.5	50	50	ENSMUST00000222633.2	ENSMUSG00000097009.3	Gm26861	chr13	lncRNA	predicted gene, 26861
chr13	10604779;10606722	10606530;10702627	+	10604779;10653056	10606383;10702627	MXE	0.5	100	100	ENSMUST00000222633.2	ENSMUSG00000097009.3	Gm26861	chr13	lncRNA	predicted gene, 26861
chr13	10726472	10775134	+	10726472	10781243	A3SS	0.33	50	50	ENSMUST00000222633.2	ENSMUSG00000097009.3	Gm26861	chr13	lncRNA	predicted gene, 26861
chr13	11540119;11541006	11540888;11541272	+	11540119;11540607	11540540;11541272	MXE	0.5	100	100	ENSMUST00000222293.2	ENSMUSG00000113593.2	Zp4-ps	chr13	transcribed_unprocessed_pseudogene	zona pellucida glycoprotein 4, pseudogene
chr13	11661491	11664616	-	11661491;11662623	11662588;11664616	ES	0.5	50	50	ENSMUST00000021750.15	ENSMUSG00000021313.17	Ryr2	chr13	protein_coding	ryanodine receptor 2, cardiac
chr13	11905734	11933197	-	11905734;11918124	11918104;11933197	ES	0.33	50	50	ENSMUST00000021750.15	ENSMUSG00000021313.17	Ryr2	chr13	protein_coding	ryanodine receptor 2, cardiac
chr13	11637887;11649216	11649193;11650411	-	11637887	11650411	cassetteExon	0.5	100	100	ENSMUST00000021750.15	ENSMUSG00000021313.17	Ryr2	chr13	protein_coding	ryanodine receptor 2, cardiac
chr13	11915798	11933197	-	11918124	11933197	A3SS&ES	0.33	50	50	ENSMUST00000021750.15	ENSMUSG00000021313.17	Ryr2	chr13	protein_coding	ryanodine receptor 2, cardiac
chr13	11900424	11910078	-	11900424	11905720	A5SS&ES	0.5	50	50	ENSMUST00000021750.15	ENSMUSG00000021313.17	Ryr2	chr13	protein_coding	ryanodine receptor 2, cardiac
chr13	11900424;11905734	11905720;11933197	-	11900424;11915798	11910078;11933197	MXE	0.5	100	100	ENSMUST00000170156.3	ENSMUSG00000021313.17	Ryr2	chr13	protein_coding	ryanodine receptor 2, cardiac
chr13	11661491	11664616	-	11662623	11664616	A3SS	0.5	50	50	ENSMUST00000221941.2	ENSMUSG00000021313.17	Ryr2	chr13	protein_coding	ryanodine receptor 2, cardiac
chr13	11915798	11933197	-	11905734	11933197	A3SS	0.33	50	50	ENSMUST00000220597.2	ENSMUSG00000021313.17	Ryr2	chr13	protein_coding	ryanodine receptor 2, cardiac
chr13	12205290	12210124	-	12205290;12208696	12208500;12210124	ES	0.5	50	50	ENSMUST00000099856.6	ENSMUSG00000021311.10	Mtr	chr13	protein_coding	5-methyltetrahydrofolate-homocysteine methyltransferase
chr13	12212874	12215083	-	12212874;12214030	12213932;12215083	ES	0.5	50	50	ENSMUST00000099856.6	ENSMUSG00000021311.10	Mtr	chr13	protein_coding	5-methyltetrahydrofolate-homocysteine methyltransferase
chr13	12262871	12265488	-	12262871;12264800	12264731;12265488	ES	0.5	50	50	ENSMUST00000099856.6	ENSMUSG00000021311.10	Mtr	chr13	protein_coding	5-methyltetrahydrofolate-homocysteine methyltransferase
chr13	12291320	12293680	-	12292419	12293680	A3SS&ES	0.5	50	50	ENSMUST00000064204.14	ENSMUSG00000052374.17	Actn2	chr13	protein_coding	actinin alpha 2
chr13	12287650	12288882	-	12287650	12289964	A5SS	0.5	50	50	ENSMUST00000064204.14	ENSMUSG00000052374.17	Actn2	chr13	protein_coding	actinin alpha 2
chr13	12417738	12418026	+	12417806	12418026	A5SS	0.5	50	50	ENSMUST00000059270.10	ENSMUSG00000050244.10	Heatr1	chr13	protein_coding	HEAT repeat containing 1
chr13	12469826	12474055	-	12469826;12471313	12471225;12474055	ES	0.5	50	50	ENSMUST00000124888.8	ENSMUSG00000057554.14	Lgals8	chr13	protein_coding	lectin, galactose binding, soluble 8
chr13	12471313	12476308	-	12471313;12474197	12474055;12476308	ES	0.5	50	50	ENSMUST00000124888.8	ENSMUSG00000057554.14	Lgals8	chr13	protein_coding	lectin, galactose binding, soluble 8
chr13	12467659	12468139	-	12467659	12468166	A5SS	0.5	50	50	ENSMUST00000124888.8	ENSMUSG00000057554.14	Lgals8	chr13	protein_coding	lectin, galactose binding, soluble 8
chr13	12474197	12475686	-	12474197	12476308	A5SS	0.33	50	50	ENSMUST00000124888.8	ENSMUSG00000057554.14	Lgals8	chr13	protein_coding	lectin, galactose binding, soluble 8
chr13	12474197	12476122	-	12474197	12476308	A5SS	0.33	50	50	ENSMUST00000124888.8	ENSMUSG00000057554.14	Lgals8	chr13	protein_coding	lectin, galactose binding, soluble 8
chr13	12469826;12471313	12471225;12476308	-	12469826;12474197	12474055;12476308	MXE	0.5	100	100	ENSMUST00000143693.8	ENSMUSG00000057554.14	Lgals8	chr13	protein_coding	lectin, galactose binding, soluble 8
chr13	12471313	12476308	-	12471313	12474055	A5SS&ES	0.5	50	50	ENSMUST00000099820.10	ENSMUSG00000057554.14	Lgals8	chr13	protein_coding	lectin, galactose binding, soluble 8
chr13	12474197	12475686	-	12474197	12476122	A5SS	0.33	50	50	ENSMUST00000099820.10	ENSMUSG00000057554.14	Lgals8	chr13	protein_coding	lectin, galactose binding, soluble 8
chr13	12469826	12474055	-	12469826	12471225	5pMXE	0.5	50	50	ENSMUST00000155871.8	ENSMUSG00000057554.14	Lgals8	chr13	protein_coding	lectin, galactose binding, soluble 8
chr13	12576003	12577228	+	12556455	12577228	A5SS	0.5	50	50	ENSMUST00000220776.2	ENSMUSG00000114115.2	Gm30239	chr13	lncRNA	predicted gene, 30239
chr13	12619350	12621716	+	12619350	12620584	3pMXE	0.33	50	50	ENSMUST00000221560.2	ENSMUSG00000057069.8	Ero1b	chr13	protein_coding	endoplasmic reticulum oxidoreductase 1 beta
chr13	12619350	12624457	+	12619350	12620584	3pMXE	0.33	50	50	ENSMUST00000221560.2	ENSMUSG00000057069.8	Ero1b	chr13	protein_coding	endoplasmic reticulum oxidoreductase 1 beta
chr13	12581496	12589701	+	12581059	12589701	A5SS	0.5	50	50	ENSMUST00000221560.2	ENSMUSG00000057069.8	Ero1b	chr13	protein_coding	endoplasmic reticulum oxidoreductase 1 beta
chr13	12619350	12624457	+	12619350	12621716	3pMXE	0.33	50	50	ENSMUST00000071973.8	ENSMUSG00000057069.8	Ero1b	chr13	protein_coding	endoplasmic reticulum oxidoreductase 1 beta
chr13	12630738;12632388	12632144;12632614	-	12630738	12632614	cassetteExon	0.5	100	100	ENSMUST00000220758.2	ENSMUSG00000097715.3	Gpr137b-ps	chr13	transcribed_unprocessed_pseudogene	G protein-coupled receptor 137B, pseudogene
chr13	12634783;12635720	12635660;12636247	-	12634783	12636247	cassetteExon	0.5	100	100	ENSMUST00000220758.2	ENSMUSG00000097715.3	Gpr137b-ps	chr13	transcribed_unprocessed_pseudogene	G protein-coupled receptor 137B, pseudogene
chr13	12630738	12632614	-	12632388	12632614	3pMXE	0.5	50	50	ENSMUST00000223146.2	ENSMUSG00000097715.3	Gpr137b-ps	chr13	transcribed_unprocessed_pseudogene	G protein-coupled receptor 137B, pseudogene
chr13	12811895;12814766	12814639;12814871	-	12811895	12814871	cassetteExon	0.5	100	100	ENSMUST00000099805.3	ENSMUSG00000056457.7	Prl2c3	chr13	protein_coding	prolactin family 2, subfamily c, member 3
chr13	12811895	12813161	-	12811895	12814871	A5SS	0.33	50	50	ENSMUST00000099805.3	ENSMUSG00000056457.7	Prl2c3	chr13	protein_coding	prolactin family 2, subfamily c, member 3
chr13	12811895	12813161	-	12811895	12814639	A5SS	0.33	50	50	ENSMUST00000222139.2	ENSMUSG00000056457.7	Prl2c3	chr13	protein_coding	prolactin family 2, subfamily c, member 3
chr13	13172052	13176719	-	13172052;13173273	13173166;13176719	ES	0.5	50	50	ENSMUST00000110594.4	ENSMUSG00000079092.5	Prl2c2	chr13	protein_coding	prolactin family 2, subfamily c, member 2
chr13	13176894;13179776	13179649;13179881	-	13176894	13179881	cassetteExon	0.5	100	100	ENSMUST00000110594.4	ENSMUSG00000079092.5	Prl2c2	chr13	protein_coding	prolactin family 2, subfamily c, member 2
chr13	13176894	13179881	-	13176894	13179649	5pMXE	0.5	50	50	ENSMUST00000220558.2	ENSMUSG00000079092.5	Prl2c2	chr13	protein_coding	prolactin family 2, subfamily c, member 2
chr13	13176894	13179881	-	13179776	13179881	3pMXE	0.5	50	50	ENSMUST00000221627.2	ENSMUSG00000079092.5	Prl2c2	chr13	protein_coding	prolactin family 2, subfamily c, member 2
chr13	13357397;13357629	13357502;13360375	+	13357397	13360375	cassetteExon	0.5	100	100	ENSMUST00000021778.14	ENSMUSG00000055360.14	Prl2c5	chr13	protein_coding	prolactin family 2, subfamily c, member 5
chr13	13548993	13568440	-	13548993	13567710	5pMXE	0.25	50	50	ENSMUST00000021738.10	ENSMUSG00000021306.12	Gpr137b	chr13	protein_coding	G protein-coupled receptor 137B
chr13	13534008;13535657	13535413;13535883	-	13534008	13535883	cassetteExon	0.5	100	100	ENSMUST00000021738.10	ENSMUSG00000021306.12	Gpr137b	chr13	protein_coding	G protein-coupled receptor 137B
chr13	13548993	13566168	-	13548993	13567710	A5SS	0.25	50	50	ENSMUST00000021738.10	ENSMUSG00000021306.12	Gpr137b	chr13	protein_coding	G protein-coupled receptor 137B
chr13	13548993	13567663	-	13548993	13567710	A5SS	0.25	50	50	ENSMUST00000021738.10	ENSMUSG00000021306.12	Gpr137b	chr13	protein_coding	G protein-coupled receptor 137B
chr13	13548993	13568440	-	13548993	13567663	5pMXE	0.25	50	50	ENSMUST00000222958.2	ENSMUSG00000021306.12	Gpr137b	chr13	protein_coding	G protein-coupled receptor 137B
chr13	13548993	13566168	-	13548993	13567663	A5SS	0.25	50	50	ENSMUST00000222958.2	ENSMUSG00000021306.12	Gpr137b	chr13	protein_coding	G protein-coupled receptor 137B
chr13	13534008	13535883	-	13535657	13535883	A3SS	0.5	50	50	ENSMUST00000220628.2	ENSMUSG00000021306.12	Gpr137b	chr13	protein_coding	G protein-coupled receptor 137B
chr13	13548993	13566168	-	13548993	13568440	A5SS	0.25	50	50	ENSMUST00000221340.2	ENSMUSG00000021306.12	Gpr137b	chr13	protein_coding	G protein-coupled receptor 137B
chr13	13858686;13861573	13861418;13862204	+	13858686	13862204	cassetteExon	0.5	100	100	ENSMUST00000110559.3	ENSMUSG00000019726.13	Lyst	chr13	protein_coding	lysosomal trafficking regulator
chr13	13959228	13978184	+	13958692	13978184	A5SS	0.5	50	50	ENSMUST00000138783.8	ENSMUSG00000021303.15	Gng4	chr13	protein_coding	guanine nucleotide binding protein (G protein), gamma 4
chr13	13993975	13999832	+	13980755	13999832	A5SS	0.5	50	50	ENSMUST00000021734.9	ENSMUSG00000021303.15	Gng4	chr13	protein_coding	guanine nucleotide binding protein (G protein), gamma 4
chr13	14145452	14155186	+	14145452;14150219	14150023;14155186	ES	0.5	50	50	ENSMUST00000099747.5	ENSMUSG00000039242.11	B3galnt2	chr13	protein_coding	UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2
chr13	14150219	14161938	+	14150219;14155281	14155186;14161938	ES	0.33	50	50	ENSMUST00000099747.5	ENSMUSG00000039242.11	B3galnt2	chr13	protein_coding	UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2
chr13	14141042	14145375	+	14141042	14145352	A3SS	0.5	50	50	ENSMUST00000099747.5	ENSMUSG00000039242.11	B3galnt2	chr13	protein_coding	UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2
chr13	14165452	14165995	+	14165452	14165954	A3SS	0.5	50	50	ENSMUST00000099747.5	ENSMUSG00000039242.11	B3galnt2	chr13	protein_coding	UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2
chr13	14139488	14140895	+	14129504	14140895	A5SS	0.5	50	50	ENSMUST00000099747.5	ENSMUSG00000039242.11	B3galnt2	chr13	protein_coding	UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2
chr13	14145452	14155186	+	14145452	14150023	3pMXE	0.33	50	50	ENSMUST00000223307.2	ENSMUSG00000039242.11	B3galnt2	chr13	protein_coding	UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2
chr13	14145452	14161938	+	14145452	14150023	3pMXE	0.33	50	50	ENSMUST00000223307.2	ENSMUSG00000039242.11	B3galnt2	chr13	protein_coding	UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2
chr13	14171637	14172940	+	14171637	14172964	A3SS	0.5	50	50	ENSMUST00000221974.2	ENSMUSG00000039242.11	B3galnt2	chr13	protein_coding	UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2
chr13	14171609	14172964	+	14171637	14172964	A5SS	0.5	50	50	ENSMUST00000221974.2	ENSMUSG00000039242.11	B3galnt2	chr13	protein_coding	UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2
chr13	14145452;14150219	14150023;14161938	+	14145452	14161938	cassetteExon	0.5	100	100	ENSMUST00000222110.2	ENSMUSG00000039242.11	B3galnt2	chr13	protein_coding	UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2
chr13	14145452;14155281	14155186;14161938	+	14145452	14161938	cassetteExon	0.5	100	100	ENSMUST00000222110.2	ENSMUSG00000039242.11	B3galnt2	chr13	protein_coding	UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2
chr13	14145452;14150219	14150023;14161938	+	14145452;14155281	14155186;14161938	MXE	0.5	100	100	ENSMUST00000223483.2	ENSMUSG00000039242.11	B3galnt2	chr13	protein_coding	UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2
chr13	14181122;14183276	14183200;14184214	-	14181122	14184214	cassetteExon	0.5	100	100	ENSMUST00000159893.8	ENSMUSG00000039233.13	Tbce	chr13	protein_coding	tubulin-specific chaperone E
chr13	14194472;14202367	14202283;14203861	-	14194472	14203861	cassetteExon	0.5	100	100	ENSMUST00000159893.8	ENSMUSG00000039233.13	Tbce	chr13	protein_coding	tubulin-specific chaperone E
chr13	14175763	14178118	-	14175763	14178128	A5SS	0.5	50	50	ENSMUST00000159893.8	ENSMUSG00000039233.13	Tbce	chr13	protein_coding	tubulin-specific chaperone E
chr13	14183276	14184045	-	14183276	14184214	A5SS	0.5	50	50	ENSMUST00000039894.13	ENSMUSG00000039233.13	Tbce	chr13	protein_coding	tubulin-specific chaperone E
chr13	14181122	14184214	-	14181122	14183200	5pMXE	0.5	50	50	ENSMUST00000162241.8	ENSMUSG00000039233.13	Tbce	chr13	protein_coding	tubulin-specific chaperone E
chr13	14229040	14232381	-	14229040;14229805	14229735;14232381	ES	0.5	50	50	ENSMUST00000170957.3	ENSMUSG00000021302.11	Ggps1	chr13	protein_coding	geranylgeranyl diphosphate synthase 1
chr13	14229805	14237791	-	14229805;14232473	14232381;14237791	ES	0.16	50	50	ENSMUST00000170957.3	ENSMUSG00000021302.11	Ggps1	chr13	protein_coding	geranylgeranyl diphosphate synthase 1
chr13	14232473;14234035	14233904;14237791	-	14232473	14237791	cassetteExon	0.5	100	100	ENSMUST00000170957.3	ENSMUSG00000021302.11	Ggps1	chr13	protein_coding	geranylgeranyl diphosphate synthase 1
chr13	14232473;14234038	14233904;14237791	-	14232473	14237791	cassetteExon	0.5	100	100	ENSMUST00000170957.3	ENSMUSG00000021302.11	Ggps1	chr13	protein_coding	geranylgeranyl diphosphate synthase 1
chr13	14232473;14234042	14233904;14237791	-	14232473	14237791	cassetteExon	0.5	100	100	ENSMUST00000170957.3	ENSMUSG00000021302.11	Ggps1	chr13	protein_coding	geranylgeranyl diphosphate synthase 1
chr13	14232473;14235592	14235548;14237791	-	14232473	14237791	cassetteExon	0.5	100	100	ENSMUST00000170957.3	ENSMUSG00000021302.11	Ggps1	chr13	protein_coding	geranylgeranyl diphosphate synthase 1
chr13	14232473	14233509	-	14232473	14237791	A5SS	0.25	50	50	ENSMUST00000170957.3	ENSMUSG00000021302.11	Ggps1	chr13	protein_coding	geranylgeranyl diphosphate synthase 1
chr13	14232473;14233796	14233509;14233904	-	14232473	14233904	cassetteExon	0.5	100	100	ENSMUST00000222164.2	ENSMUSG00000021302.11	Ggps1	chr13	protein_coding	geranylgeranyl diphosphate synthase 1
chr13	14232473;14235592	14235548;14237791	-	14232473;14234035	14233904;14237791	MXE	0.5	100	100	ENSMUST00000222164.2	ENSMUSG00000021302.11	Ggps1	chr13	protein_coding	geranylgeranyl diphosphate synthase 1
chr13	14234038	14237791	-	14234035	14237791	A3SS	0.16	50	50	ENSMUST00000222164.2	ENSMUSG00000021302.11	Ggps1	chr13	protein_coding	geranylgeranyl diphosphate synthase 1
chr13	14234042	14237791	-	14234035	14237791	A3SS	0.16	50	50	ENSMUST00000222164.2	ENSMUSG00000021302.11	Ggps1	chr13	protein_coding	geranylgeranyl diphosphate synthase 1
chr13	14229040;14232473	14232381;14237791	-	14229040;14229805	14229735;14237791	MXE	0.5	100	100	ENSMUST00000222687.2	ENSMUSG00000021302.11	Ggps1	chr13	protein_coding	geranylgeranyl diphosphate synthase 1
chr13	14234035	14237791	-	14229805	14237791	A3SS	0.16	50	50	ENSMUST00000222687.2	ENSMUSG00000021302.11	Ggps1	chr13	protein_coding	geranylgeranyl diphosphate synthase 1
chr13	14234038	14237791	-	14229805	14237791	A3SS	0.16	50	50	ENSMUST00000222687.2	ENSMUSG00000021302.11	Ggps1	chr13	protein_coding	geranylgeranyl diphosphate synthase 1
chr13	14234042	14237791	-	14229805	14237791	A3SS	0.16	50	50	ENSMUST00000222687.2	ENSMUSG00000021302.11	Ggps1	chr13	protein_coding	geranylgeranyl diphosphate synthase 1
chr13	14235592	14237791	-	14229805	14237791	A3SS	0.16	50	50	ENSMUST00000222687.2	ENSMUSG00000021302.11	Ggps1	chr13	protein_coding	geranylgeranyl diphosphate synthase 1
chr13	14232473;14235592	14235548;14237791	-	14232473;14234038	14233904;14237791	MXE	0.5	100	100	ENSMUST00000223174.2	ENSMUSG00000021302.11	Ggps1	chr13	protein_coding	geranylgeranyl diphosphate synthase 1
chr13	14234042	14237791	-	14234038	14237791	A3SS	0.16	50	50	ENSMUST00000223174.2	ENSMUSG00000021302.11	Ggps1	chr13	protein_coding	geranylgeranyl diphosphate synthase 1
chr13	14232473;14234042	14233904;14237791	-	14232473;14235592	14235548;14237791	MXE	0.5	100	100	ENSMUST00000221338.2	ENSMUSG00000021302.11	Ggps1	chr13	protein_coding	geranylgeranyl diphosphate synthase 1
chr13	14232473	14233509	-	14232473	14235548	A5SS	0.25	50	50	ENSMUST00000221338.2	ENSMUSG00000021302.11	Ggps1	chr13	protein_coding	geranylgeranyl diphosphate synthase 1
chr13	14229040;14229805	14229735;14237791	-	14229040;14234042	14232381;14237791	MXE	0.5	100	100	ENSMUST00000221713.2	ENSMUSG00000021302.11	Ggps1	chr13	protein_coding	geranylgeranyl diphosphate synthase 1
chr13	14232473	14233904	-	14233796	14233904	3pMXE	0.5	50	50	ENSMUST00000221406.2	ENSMUSG00000021302.11	Ggps1	chr13	protein_coding	geranylgeranyl diphosphate synthase 1
chr13	14235592	14237791	-	14234042	14237791	A3SS	0.25	50	50	ENSMUST00000221406.2	ENSMUSG00000021302.11	Ggps1	chr13	protein_coding	geranylgeranyl diphosphate synthase 1
chr13	14238499	14239410	+	14238306	14239410	A5SS	0.2	50	50	ENSMUST00000155553.8	ENSMUSG00000039219.19	Arid4b	chr13	protein_coding	AT rich interactive domain 4B (RBP1-like)
chr13	14238617	14239410	+	14238306	14239410	A5SS	0.2	50	50	ENSMUST00000155553.8	ENSMUSG00000039219.19	Arid4b	chr13	protein_coding	AT rich interactive domain 4B (RBP1-like)
chr13	14238785	14239410	+	14238306	14239410	A5SS	0.2	50	50	ENSMUST00000155553.8	ENSMUSG00000039219.19	Arid4b	chr13	protein_coding	AT rich interactive domain 4B (RBP1-like)
chr13	14239183	14239410	+	14238306	14239410	A5SS	0.2	50	50	ENSMUST00000155553.8	ENSMUSG00000039219.19	Arid4b	chr13	protein_coding	AT rich interactive domain 4B (RBP1-like)
chr13	14307100	14317565	+	14307100;14310844	14310753;14317565	ES	0.5	50	50	ENSMUST00000129488.8	ENSMUSG00000039219.19	Arid4b	chr13	protein_coding	AT rich interactive domain 4B (RBP1-like)
chr13	14339527	14355805	+	14339527	14344504	3pMXE	0.5	50	50	ENSMUST00000129488.8	ENSMUSG00000039219.19	Arid4b	chr13	protein_coding	AT rich interactive domain 4B (RBP1-like)
chr13	14238617	14239410	+	14238499	14239410	A5SS	0.2	50	50	ENSMUST00000129488.8	ENSMUSG00000039219.19	Arid4b	chr13	protein_coding	AT rich interactive domain 4B (RBP1-like)
chr13	14238785	14239410	+	14238499	14239410	A5SS	0.2	50	50	ENSMUST00000129488.8	ENSMUSG00000039219.19	Arid4b	chr13	protein_coding	AT rich interactive domain 4B (RBP1-like)
chr13	14239183	14239410	+	14238499	14239410	A5SS	0.2	50	50	ENSMUST00000129488.8	ENSMUSG00000039219.19	Arid4b	chr13	protein_coding	AT rich interactive domain 4B (RBP1-like)
chr13	14339527;14344656	14344504;14355805	+	14339527	14355805	cassetteExon	0.5	100	100	ENSMUST00000110536.8	ENSMUSG00000039219.19	Arid4b	chr13	protein_coding	AT rich interactive domain 4B (RBP1-like)
chr13	14339527;14344764	14344504;14355805	+	14339527	14355805	cassetteExon	0.5	100	100	ENSMUST00000110536.8	ENSMUSG00000039219.19	Arid4b	chr13	protein_coding	AT rich interactive domain 4B (RBP1-like)
chr13	14365841;14366686	14366534;14367951	+	14365841	14367951	cassetteExon	0.5	100	100	ENSMUST00000110536.8	ENSMUSG00000039219.19	Arid4b	chr13	protein_coding	AT rich interactive domain 4B (RBP1-like)
chr13	14238617	14239410	+	14238785	14239410	A5SS	0.2	50	50	ENSMUST00000110536.8	ENSMUSG00000039219.19	Arid4b	chr13	protein_coding	AT rich interactive domain 4B (RBP1-like)
chr13	14239183	14239410	+	14238785	14239410	A5SS	0.2	50	50	ENSMUST00000110536.8	ENSMUSG00000039219.19	Arid4b	chr13	protein_coding	AT rich interactive domain 4B (RBP1-like)
chr13	14239183	14239410	+	14238617	14239410	A5SS	0.2	50	50	ENSMUST00000110534.8	ENSMUSG00000039219.19	Arid4b	chr13	protein_coding	AT rich interactive domain 4B (RBP1-like)
chr13	14344656	14355805	+	14344764	14355805	A5SS	0.33	50	50	ENSMUST00000110534.8	ENSMUSG00000039219.19	Arid4b	chr13	protein_coding	AT rich interactive domain 4B (RBP1-like)
chr13	14552567	14697409	-	14552567;14609076	14609019;14697409	ES	0.5	50	50	ENSMUST00000110516.3	ENSMUSG00000021301.10	Hecw1	chr13	protein_coding	HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
chr13	14486375	14490644	-	14486375	14490602	A5SS	0.5	50	50	ENSMUST00000110516.3	ENSMUSG00000021301.10	Hecw1	chr13	protein_coding	HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
chr13	14552567	14696016	-	14552567	14609019	A5SS&ES	0.33	50	50	ENSMUST00000110516.3	ENSMUSG00000021301.10	Hecw1	chr13	protein_coding	HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
chr13	14609076	14696016	-	14609076	14697409	A5SS	0.5	50	50	ENSMUST00000110516.3	ENSMUSG00000021301.10	Hecw1	chr13	protein_coding	HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
chr13	14552567	14696016	-	14552567	14697409	A5SS	0.33	50	50	ENSMUST00000221863.2	ENSMUSG00000021301.10	Hecw1	chr13	protein_coding	HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
chr13	14552567;14609076	14609019;14696016	-	14552567	14696016	cassetteExon	0.5	100	100	ENSMUST00000221274.2	ENSMUSG00000021301.10	Hecw1	chr13	protein_coding	HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
chr13	14552567	14697409	-	14609076	14697409	3pMXE	0.5	50	50	ENSMUST00000223283.2	ENSMUSG00000021301.10	Hecw1	chr13	protein_coding	HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
chr13	14697328	14698756	+	14696127	14698756	A5SS	0.5	50	50	ENSMUST00000220479.2	ENSMUSG00000113654.2	Gm30893	chr13	lncRNA	predicted gene, 30893
chr13	14786189	14787447	-	14786189	14787477	A5SS	0.33	50	50	ENSMUST00000220621.2	ENSMUSG00000015672.5	Mrpl32	chr13	protein_coding	mitochondrial ribosomal protein L32
chr13	14786189	14787493	-	14786189	14787477	A5SS	0.33	50	50	ENSMUST00000220621.2	ENSMUSG00000015672.5	Mrpl32	chr13	protein_coding	mitochondrial ribosomal protein L32
chr13	14786189	14787493	-	14786189	14787447	A5SS	0.33	50	50	ENSMUST00000221699.2	ENSMUSG00000015672.5	Mrpl32	chr13	protein_coding	mitochondrial ribosomal protein L32
chr13	14804949	14810885	+	14804869	14810885	A5SS	0.33	50	50	ENSMUST00000178289.3	ENSMUSG00000039182.7	AW209491	chr13	protein_coding	expressed sequence AW209491
chr13	14804972	14810885	+	14804869	14810885	A5SS	0.33	50	50	ENSMUST00000178289.3	ENSMUSG00000039182.7	AW209491	chr13	protein_coding	expressed sequence AW209491
chr13	14804972	14810885	+	14804949	14810885	A5SS	0.33	50	50	ENSMUST00000038690.6	ENSMUSG00000039182.7	AW209491	chr13	protein_coding	expressed sequence AW209491
chr13	15638696	15652585	+	15637993	15652585	A5SS	0.5	50	50	ENSMUST00000130065.8	ENSMUSG00000021318.16	Gli3	chr13	protein_coding	GLI-Kruppel family member GLI3
chr13	15637993	15652585	+	15637993	15788364	A3SS	0.5	50	50	ENSMUST00000141194.8	ENSMUSG00000021318.16	Gli3	chr13	protein_coding	GLI-Kruppel family member GLI3
chr13	15723227	15788364	+	15637993	15788364	A5SS	0.5	50	50	ENSMUST00000141194.8	ENSMUSG00000021318.16	Gli3	chr13	protein_coding	GLI-Kruppel family member GLI3
chr13	16119925	16197850	-	16091232	16197850	A3SS	0.5	50	50	ENSMUST00000220672.2	ENSMUSG00000113701.2	B230303A05Rik	chr13	transcribed_processed_pseudogene	RIKEN cDNA B230303A05 gene
chr13	16091232	16101030	-	16091232	16197850	A5SS	0.5	50	50	ENSMUST00000220672.2	ENSMUSG00000113701.2	B230303A05Rik	chr13	transcribed_processed_pseudogene	RIKEN cDNA B230303A05 gene
chr13	17859370	17869224	-	17847187	17869224	A3SS	0.25	50	50	ENSMUST00000068545.6	ENSMUSG00000055137.8	Sugct	chr13	protein_coding	succinyl-CoA glutarate-CoA transferase
chr13	17859374	17869224	-	17847187	17869224	A3SS	0.25	50	50	ENSMUST00000068545.6	ENSMUSG00000055137.8	Sugct	chr13	protein_coding	succinyl-CoA glutarate-CoA transferase
chr13	17847187	17869224	-	17837409	17869224	A3SS	0.25	50	50	ENSMUST00000221598.2	ENSMUSG00000055137.8	Sugct	chr13	protein_coding	succinyl-CoA glutarate-CoA transferase
chr13	17859370	17869224	-	17837409	17869224	A3SS	0.25	50	50	ENSMUST00000221598.2	ENSMUSG00000055137.8	Sugct	chr13	protein_coding	succinyl-CoA glutarate-CoA transferase
chr13	17859374	17869224	-	17837409	17869224	A3SS	0.25	50	50	ENSMUST00000221598.2	ENSMUSG00000055137.8	Sugct	chr13	protein_coding	succinyl-CoA glutarate-CoA transferase
chr13	17837409	17846286	-	17837409	17869224	A5SS	0.5	50	50	ENSMUST00000221598.2	ENSMUSG00000055137.8	Sugct	chr13	protein_coding	succinyl-CoA glutarate-CoA transferase
chr13	17859370	17869889	-	17859370	17869224	5pMXE	0.5	50	50	ENSMUST00000220514.2	ENSMUSG00000055137.8	Sugct	chr13	protein_coding	succinyl-CoA glutarate-CoA transferase
chr13	17858433	17859294	-	17858437	17859294	A3SS	0.5	50	50	ENSMUST00000220514.2	ENSMUSG00000055137.8	Sugct	chr13	protein_coding	succinyl-CoA glutarate-CoA transferase
chr13	17859374	17869224	-	17859370	17869224	A3SS	0.5	50	50	ENSMUST00000220514.2	ENSMUSG00000055137.8	Sugct	chr13	protein_coding	succinyl-CoA glutarate-CoA transferase
chr13	17870405	17871427	+	17869943	17871427	A5SS	0.5	50	50	ENSMUST00000221480.2	ENSMUSG00000012429.10	Mplkip	chr13	protein_coding	M-phase specific PLK1 intereacting protein
chr13	17894390	17895673	-	17894210	17895673	A3SS	0.5	50	50	ENSMUST00000223490.2	ENSMUSG00000041297.9	Cdk13	chr13	protein_coding	cyclin-dependent kinase 13
chr13	17947542	17974227	-	17947542	17978023	A5SS	0.5	50	50	ENSMUST00000223490.2	ENSMUSG00000041297.9	Cdk13	chr13	protein_coding	cyclin-dependent kinase 13
chr13	18071687	18118324	-	18071687	18118602	A5SS	0.5	50	50	ENSMUST00000009003.9	ENSMUSG00000008859.9	Rala	chr13	protein_coding	v-ral simian leukemia viral oncogene A (ras related)
chr13	18166334	18167377	-	18166334	18167077	5pMXE	0.33	50	50	ENSMUST00000223489.2	ENSMUSG00000113030.2	Gm48778	chr13	lncRNA	predicted gene, 48778
chr13	18166334	18167766	-	18166334	18167077	5pMXE	0.33	50	50	ENSMUST00000223489.2	ENSMUSG00000113030.2	Gm48778	chr13	lncRNA	predicted gene, 48778
chr13	18166334	18167377	-	18166334	18167766	A5SS	0.33	50	50	ENSMUST00000099735.6	ENSMUSG00000075054.6	Yae1d1	chr13	protein_coding	Yae1 domain containing 1
chr13	18303776	18326501	-	18303776;18314303	18314135;18326501	ES	0.33	50	50	ENSMUST00000139064.10	ENSMUSG00000009734.19	Pou6f2	chr13	protein_coding	POU domain, class 6, transcription factor 2
chr13	18300143	18303608	-	18300251	18303608	A3SS	0.5	50	50	ENSMUST00000139064.10	ENSMUSG00000009734.19	Pou6f2	chr13	protein_coding	POU domain, class 6, transcription factor 2
chr13	18313694	18314135	-	18303776	18314135	A3SS	0.5	50	50	ENSMUST00000139064.10	ENSMUSG00000009734.19	Pou6f2	chr13	protein_coding	POU domain, class 6, transcription factor 2
chr13	18323107	18326501	-	18314303	18326501	A3SS	0.33	50	50	ENSMUST00000139064.10	ENSMUSG00000009734.19	Pou6f2	chr13	protein_coding	POU domain, class 6, transcription factor 2
chr13	18521141	18553011	-	18414451	18553011	A3SS	0.5	50	50	ENSMUST00000139064.10	ENSMUSG00000009734.19	Pou6f2	chr13	protein_coding	POU domain, class 6, transcription factor 2
chr13	18347138	18361000	-	18347138	18414054	A5SS	0.5	50	50	ENSMUST00000139064.10	ENSMUSG00000009734.19	Pou6f2	chr13	protein_coding	POU domain, class 6, transcription factor 2
chr13	18323107	18326501	-	18303776	18326501	A3SS	0.33	50	50	ENSMUST00000176795.8	ENSMUSG00000009734.19	Pou6f2	chr13	protein_coding	POU domain, class 6, transcription factor 2
chr13	18929509	18966817	+	18929509	18932260	3pMXE	0.5	50	50	ENSMUST00000222269.2	ENSMUSG00000041236.9	Vps41	chr13	protein_coding	VPS41 HOPS complex subunit
chr13	18998463	19011774	+	18998463;19008047	19007950;19011774	ES	0.5	50	50	ENSMUST00000072961.6	ENSMUSG00000041236.9	Vps41	chr13	protein_coding	VPS41 HOPS complex subunit
chr13	18964101	18966817	+	18929509	18966817	A5SS	0.5	50	50	ENSMUST00000072961.6	ENSMUSG00000041236.9	Vps41	chr13	protein_coding	VPS41 HOPS complex subunit
chr13	18998463	19011774	+	19008047	19011774	5pMXE	0.5	50	50	ENSMUST00000222010.2	ENSMUSG00000041236.9	Vps41	chr13	protein_coding	VPS41 HOPS complex subunit
chr13	19302345	19304766	+	19302345;19303106	19302594;19304766	ES	0.33	50	50	ENSMUST00000239207.2	ENSMUSG00000021314.14	Amph	chr13	protein_coding	amphiphysin
chr13	19305501;19309318	19309196;19321706	+	19305501	19321706	cassetteExon	0.5	100	100	ENSMUST00000239207.2	ENSMUSG00000021314.14	Amph	chr13	protein_coding	amphiphysin
chr13	19249076	19261501	+	19230203	19261501	A5SS	0.5	50	50	ENSMUST00000239207.2	ENSMUSG00000021314.14	Amph	chr13	protein_coding	amphiphysin
chr13	19304045	19304766	+	19303106	19304766	A5SS	0.33	50	50	ENSMUST00000239207.2	ENSMUSG00000021314.14	Amph	chr13	protein_coding	amphiphysin
chr13	19302345	19302594	+	19302345	19304766	A3SS	0.5	50	50	ENSMUST00000003345.10	ENSMUSG00000021314.14	Amph	chr13	protein_coding	amphiphysin
chr13	19303106	19304766	+	19302345	19304766	A5SS	0.33	50	50	ENSMUST00000003345.10	ENSMUSG00000021314.14	Amph	chr13	protein_coding	amphiphysin
chr13	19304045	19304766	+	19302345	19304766	A5SS	0.33	50	50	ENSMUST00000003345.10	ENSMUSG00000021314.14	Amph	chr13	protein_coding	amphiphysin
chr13	19305501	19309196	+	19305489	19309196	A5SS	0.5	50	50	ENSMUST00000003345.10	ENSMUSG00000021314.14	Amph	chr13	protein_coding	amphiphysin
chr13	19305501	19321706	+	19309318	19321706	A5SS&ES	0.5	50	50	ENSMUST00000003345.10	ENSMUSG00000021314.14	Amph	chr13	protein_coding	amphiphysin
chr13	19427060	19427168	+	19427060	19427165	A3SS	0.5	50	50	ENSMUST00000198663.5	ENSMUSG00000076750.7	Trgv3	chr13	TR_V_gene	T cell receptor gamma, variable 3
chr13	19446857	19447425	+	19446858	19447425	A5SS	0.5	50	50	ENSMUST00000164407.2	ENSMUSG00000091682.3	Trgc3	chr13	TR_C_gene	T cell receptor gamma, constant 3
chr13	19549515	19551914	-	19543221	19551914	A3SS	0.5	50	50	ENSMUST00000196268.5	ENSMUSG00000003062.14	Stard3nl	chr13	protein_coding	STARD3 N-terminal like
chr13	19552009	19554650	-	19552009;19554537	19554420;19554650	ES	0.5	50	50	ENSMUST00000197565.3	ENSMUSG00000003062.14	Stard3nl	chr13	protein_coding	STARD3 N-terminal like
chr13	19560831	19579874	-	19560831;19575267	19575143;19579874	ES	0.5	50	50	ENSMUST00000197565.3	ENSMUSG00000003062.14	Stard3nl	chr13	protein_coding	STARD3 N-terminal like
chr13	19560831;19573838	19573752;19575143	-	19560831	19575143	cassetteExon	0.5	100	100	ENSMUST00000197565.3	ENSMUSG00000003062.14	Stard3nl	chr13	protein_coding	STARD3 N-terminal like
chr13	19560831	19573752	-	19560831	19579874	A5SS	0.33	50	50	ENSMUST00000221380.2	ENSMUSG00000003062.14	Stard3nl	chr13	protein_coding	STARD3 N-terminal like
chr13	19552009	19554650	-	19552009	19554420	A5SS	0.5	50	50	ENSMUST00000199278.3	ENSMUSG00000003062.14	Stard3nl	chr13	protein_coding	STARD3 N-terminal like
chr13	19662838	19667185	-	19648370	19667185	A3SS	0.5	50	50	ENSMUST00000221607.2	ENSMUSG00000114189.2	9330199G10Rik	chr13	lncRNA	RIKEN cDNA 9330199G10 gene
chr13	19777518	19803464	-	19777518;19778825	19778617;19803464	ES	0.33	50	50	ENSMUST00000002885.8	ENSMUSG00000002808.8	Epdr1	chr13	protein_coding	ependymin related protein 1 (zebrafish)
chr13	19793799	19803464	-	19778825	19803464	A3SS	0.33	50	50	ENSMUST00000002885.8	ENSMUSG00000002808.8	Epdr1	chr13	protein_coding	ependymin related protein 1 (zebrafish)
chr13	19778825	19803968	-	19778825	19803464	A5SS	0.5	50	50	ENSMUST00000002885.8	ENSMUSG00000002808.8	Epdr1	chr13	protein_coding	ependymin related protein 1 (zebrafish)
chr13	19777518	19803464	-	19777518	19778617	A5SS&ES	0.5	50	50	ENSMUST00000220944.2	ENSMUSG00000002808.8	Epdr1	chr13	protein_coding	ependymin related protein 1 (zebrafish)
chr13	19793799	19803464	-	19777518	19803464	A3SS	0.33	50	50	ENSMUST00000221014.2	ENSMUSG00000002808.8	Epdr1	chr13	protein_coding	ependymin related protein 1 (zebrafish)
chr13	19809054	19809198	+	19808047	19809198	A5SS	0.5	50	50	ENSMUST00000222464.2	ENSMUSG00000021319.8	Sfrp4	chr13	protein_coding	secreted frizzled-related protein 4
chr13	19814342	19816349	+	19814299	19816349	A5SS	0.5	50	50	ENSMUST00000002883.7	ENSMUSG00000021319.8	Sfrp4	chr13	protein_coding	secreted frizzled-related protein 4
chr13	19835149	19836357	-	19835102	19836357	A3SS	0.5	50	50	ENSMUST00000223466.2	ENSMUSG00000041138.17	Nme8	chr13	protein_coding	NME/NM23 family member 8
chr13	19841937	19842082	-	19836501	19842082	A3SS	0.33	50	50	ENSMUST00000223466.2	ENSMUSG00000041138.17	Nme8	chr13	protein_coding	NME/NM23 family member 8
chr13	19873188	19874345	-	19873188	19873511	5pMXE	0.33	50	50	ENSMUST00000221343.2	ENSMUSG00000041138.17	Nme8	chr13	protein_coding	NME/NM23 family member 8
chr13	19836501	19842082	-	19829412	19842082	A3SS	0.33	50	50	ENSMUST00000221343.2	ENSMUSG00000041138.17	Nme8	chr13	protein_coding	NME/NM23 family member 8
chr13	19841937	19842082	-	19829412	19842082	A3SS	0.33	50	50	ENSMUST00000221343.2	ENSMUSG00000041138.17	Nme8	chr13	protein_coding	NME/NM23 family member 8
chr13	19829412	19834911	-	19829412	19842082	A5SS	0.5	50	50	ENSMUST00000221343.2	ENSMUSG00000041138.17	Nme8	chr13	protein_coding	NME/NM23 family member 8
chr13	19873188	19873723	-	19873188	19873511	A5SS	0.33	50	50	ENSMUST00000221343.2	ENSMUSG00000041138.17	Nme8	chr13	protein_coding	NME/NM23 family member 8
chr13	19873188	19874345	-	19873188	19873723	5pMXE	0.33	50	50	ENSMUST00000144820.3	ENSMUSG00000041138.17	Nme8	chr13	protein_coding	NME/NM23 family member 8
chr13	19880863	19881009	-	19880863	19881039	A5SS	0.5	50	50	ENSMUST00000039340.15	ENSMUSG00000041138.17	Nme8	chr13	protein_coding	NME/NM23 family member 8
chr13	19989227	20008300	-	19939373	20008300	A3SS	0.5	50	50	ENSMUST00000222664.2	ENSMUSG00000053101.4	Gpr141	chr13	protein_coding	G protein-coupled receptor 141
chr13	19939373	19963625	-	19939373	20008300	A5SS	0.5	50	50	ENSMUST00000222664.2	ENSMUSG00000053101.4	Gpr141	chr13	protein_coding	G protein-coupled receptor 141
chr13	20369674;20376344	20376205;20392304	+	20369674	20392304	cassetteExon	0.5	100	100	ENSMUST00000181429.8	ENSMUSG00000041112.18	Elmo1	chr13	protein_coding	engulfment and cell motility 1
chr13	20296021	20369524	+	20274941	20369524	A5SS	0.5	50	50	ENSMUST00000181429.8	ENSMUSG00000041112.18	Elmo1	chr13	protein_coding	engulfment and cell motility 1
chr13	20467160;20469529	20469485;20470890	+	20467160	20470890	cassetteExon	0.5	100	100	ENSMUST00000072519.7	ENSMUSG00000041112.18	Elmo1	chr13	protein_coding	engulfment and cell motility 1
chr13	20474663	20500314	+	20474663	20526538	A3SS	0.5	50	50	ENSMUST00000072519.7	ENSMUSG00000041112.18	Elmo1	chr13	protein_coding	engulfment and cell motility 1
chr13	20657457	20748594	+	20633776	20748594	A5SS	0.5	50	50	ENSMUST00000072519.7	ENSMUSG00000041112.18	Elmo1	chr13	protein_coding	engulfment and cell motility 1
chr13	21197358	21218735	+	21197358	21207379	3pMXE	0.5	50	50	ENSMUST00000021757.5	ENSMUSG00000021322.9	Aoah	chr13	protein_coding	acyloxyacyl hydrolase
chr13	20978687	20984816	+	20978687	21000692	A3SS	0.5	50	50	ENSMUST00000021757.5	ENSMUSG00000021322.9	Aoah	chr13	protein_coding	acyloxyacyl hydrolase
chr13	21035348	21035810	+	21035348	21084640	A3SS	0.5	50	50	ENSMUST00000021757.5	ENSMUSG00000021322.9	Aoah	chr13	protein_coding	acyloxyacyl hydrolase
chr13	21195576	21197282	+	21189297	21197282	A5SS	0.5	50	50	ENSMUST00000021757.5	ENSMUSG00000021322.9	Aoah	chr13	protein_coding	acyloxyacyl hydrolase
chr13	21257320	21258821	-	21257491	21258821	A3SS	0.33	50	50	ENSMUST00000215357.2	ENSMUSG00000042869.3	Olfr1370	chr13	protein_coding	olfactory receptor 1370
chr13	21257528	21258821	-	21257491	21258821	A3SS	0.33	50	50	ENSMUST00000215357.2	ENSMUSG00000042869.3	Olfr1370	chr13	protein_coding	olfactory receptor 1370
chr13	21257528	21258821	-	21257320	21258821	A3SS	0.33	50	50	ENSMUST00000213848.2	ENSMUSG00000042869.3	Olfr1370	chr13	protein_coding	olfactory receptor 1370
chr13	21295892	21299844	+	21295892;21298859	21298815;21299844	ES	0.33	50	50	ENSMUST00000213326.2	ENSMUSG00000060404.4	Olfr1369-ps1	chr13	protein_coding	olfactory receptor 1369, pseudogene 1
chr13	21295892;21296885	21296593;21298815	+	21295892	21298815	cassetteExon	0.5	100	100	ENSMUST00000213326.2	ENSMUSG00000060404.4	Olfr1369-ps1	chr13	protein_coding	olfactory receptor 1369, pseudogene 1
chr13	21295892;21296885	21296593;21299844	+	21295892;21298859	21298815;21299844	MXE	0.5	100	100	ENSMUST00000213326.2	ENSMUSG00000060404.4	Olfr1369-ps1	chr13	protein_coding	olfactory receptor 1369, pseudogene 1
chr13	21295892;21296885	21296689;21298815	+	21295892	21298815	cassetteExon	0.5	100	100	ENSMUST00000213326.2	ENSMUSG00000060404.4	Olfr1369-ps1	chr13	protein_coding	olfactory receptor 1369, pseudogene 1
chr13	21295892;21296885	21296689;21299844	+	21295892;21298859	21298815;21299844	MXE	0.5	100	100	ENSMUST00000213326.2	ENSMUSG00000060404.4	Olfr1369-ps1	chr13	protein_coding	olfactory receptor 1369, pseudogene 1
chr13	21295892;21296885	21296593;21299844	+	21295892	21299844	cassetteExon	0.5	100	100	ENSMUST00000215941.2	ENSMUSG00000060404.4	Olfr1369-ps1	chr13	protein_coding	olfactory receptor 1369, pseudogene 1
chr13	21295892;21296885	21296689;21299844	+	21295892	21299844	cassetteExon	0.5	100	100	ENSMUST00000215941.2	ENSMUSG00000060404.4	Olfr1369-ps1	chr13	protein_coding	olfactory receptor 1369, pseudogene 1
chr13	21296885;21298859	21298815;21299844	+	21296885	21299844	cassetteExon	0.5	100	100	ENSMUST00000215207.2	ENSMUSG00000060404.4	Olfr1369-ps1	chr13	protein_coding	olfactory receptor 1369, pseudogene 1
chr13	21295892	21296593	+	21295892	21296689	A3SS	0.25	50	50	ENSMUST00000215207.2	ENSMUSG00000060404.4	Olfr1369-ps1	chr13	protein_coding	olfactory receptor 1369, pseudogene 1
chr13	21374140;21374856	21374763;21375390	+	21374140;21374294	21374262;21375390	MXE	0.5	100	100	ENSMUST00000222544.2	ENSMUSG00000021326.14	Trim27	chr13	protein_coding	tripartite motif-containing 27
chr13	21374140	21374267	+	21374140	21374262	A3SS	0.33	50	50	ENSMUST00000222544.2	ENSMUSG00000021326.14	Trim27	chr13	protein_coding	tripartite motif-containing 27
chr13	21365359	21366154	+	21365084	21366154	A5SS	0.5	50	50	ENSMUST00000222544.2	ENSMUSG00000021326.14	Trim27	chr13	protein_coding	tripartite motif-containing 27
chr13	21374140;21374856	21374763;21375390	+	21374140;21374294	21374267;21375390	MXE	0.5	100	100	ENSMUST00000223065.2	ENSMUSG00000021326.14	Trim27	chr13	protein_coding	tripartite motif-containing 27
chr13	21374140	21374763	+	21374140	21374262	3pMXE	0.33	50	50	ENSMUST00000124794.2	ENSMUSG00000021326.14	Trim27	chr13	protein_coding	tripartite motif-containing 27
chr13	21501455	21501739	+	21501272	21501739	A5SS	0.5	50	50	ENSMUST00000004453.9	ENSMUSG00000004341.9	Gpx6	chr13	protein_coding	glutathione peroxidase 6
chr13	21547540	21547750	+	21547042	21547750	A5SS	0.5	50	50	ENSMUST00000225545.2	ENSMUSG00000036721.15	Zscan12	chr13	protein_coding	zinc finger and SCAN domain containing 12
chr13	21579076	21586842	-	21579076;21580747	21580270;21586842	ES	0.33	50	50	ENSMUST00000070785.16	ENSMUSG00000021327.20	Zkscan3	chr13	protein_coding	zinc finger with KRAB and SCAN domains 3
chr13	21572876;21577744	21577605;21578132	-	21572876	21578132	cassetteExon	0.5	100	100	ENSMUST00000070785.16	ENSMUSG00000021327.20	Zkscan3	chr13	protein_coding	zinc finger with KRAB and SCAN domains 3
chr13	21572876;21577965	21577605;21578132	-	21572876	21578132	cassetteExon	0.5	100	100	ENSMUST00000070785.16	ENSMUSG00000021327.20	Zkscan3	chr13	protein_coding	zinc finger with KRAB and SCAN domains 3
chr13	21580744	21586842	-	21580747	21586842	A3SS	0.33	50	50	ENSMUST00000070785.16	ENSMUSG00000021327.20	Zkscan3	chr13	protein_coding	zinc finger with KRAB and SCAN domains 3
chr13	21579076	21580357	-	21579076	21580270	A5SS	0.33	50	50	ENSMUST00000070785.16	ENSMUSG00000021327.20	Zkscan3	chr13	protein_coding	zinc finger with KRAB and SCAN domains 3
chr13	21580747	21586562	-	21580747	21586842	A5SS	0.5	50	50	ENSMUST00000070785.16	ENSMUSG00000021327.20	Zkscan3	chr13	protein_coding	zinc finger with KRAB and SCAN domains 3
chr13	21579076;21580744	21580270;21586842	-	21579076	21586842	cassetteExon	0.5	100	100	ENSMUST00000223831.2	ENSMUSG00000021327.20	Zkscan3	chr13	protein_coding	zinc finger with KRAB and SCAN domains 3
chr13	21579076;21580744	21580357;21586842	-	21579076	21586842	cassetteExon	0.5	100	100	ENSMUST00000223831.2	ENSMUSG00000021327.20	Zkscan3	chr13	protein_coding	zinc finger with KRAB and SCAN domains 3
chr13	21579076;21580747	21580357;21586842	-	21579076	21586842	cassetteExon	0.5	100	100	ENSMUST00000223831.2	ENSMUSG00000021327.20	Zkscan3	chr13	protein_coding	zinc finger with KRAB and SCAN domains 3
chr13	21580744	21586562	-	21580744	21586842	A5SS	0.5	50	50	ENSMUST00000116434.11	ENSMUSG00000021327.20	Zkscan3	chr13	protein_coding	zinc finger with KRAB and SCAN domains 3
chr13	21577965	21578132	-	21577744	21578132	A3SS	0.33	50	50	ENSMUST00000145631.9	ENSMUSG00000021327.20	Zkscan3	chr13	protein_coding	zinc finger with KRAB and SCAN domains 3
chr13	21572876	21578132	-	21577744	21578132	3pMXE	0.33	50	50	ENSMUST00000224820.2	ENSMUSG00000021327.20	Zkscan3	chr13	protein_coding	zinc finger with KRAB and SCAN domains 3
chr13	21580747	21586562	-	21580744	21586562	A3SS	0.33	50	50	ENSMUST00000224820.2	ENSMUSG00000021327.20	Zkscan3	chr13	protein_coding	zinc finger with KRAB and SCAN domains 3
chr13	21586422	21586562	-	21580744	21586562	A3SS	0.33	50	50	ENSMUST00000224820.2	ENSMUSG00000021327.20	Zkscan3	chr13	protein_coding	zinc finger with KRAB and SCAN domains 3
chr13	21579076	21586842	-	21579076	21580357	A5SS&ES	0.33	50	50	ENSMUST00000224820.2	ENSMUSG00000021327.20	Zkscan3	chr13	protein_coding	zinc finger with KRAB and SCAN domains 3
chr13	21586422	21586562	-	21580747	21586562	A3SS	0.33	50	50	ENSMUST00000117721.8	ENSMUSG00000021327.20	Zkscan3	chr13	protein_coding	zinc finger with KRAB and SCAN domains 3
chr13	21579076	21586842	-	21579076	21580270	A5SS&ES	0.33	50	50	ENSMUST00000117721.8	ENSMUSG00000021327.20	Zkscan3	chr13	protein_coding	zinc finger with KRAB and SCAN domains 3
chr13	21572876	21578132	-	21577965	21578132	3pMXE	0.33	50	50	ENSMUST00000116433.2	ENSMUSG00000021327.20	Zkscan3	chr13	protein_coding	zinc finger with KRAB and SCAN domains 3
chr13	21607794;21612532	21612438;21617561	-	21607794	21617561	cassetteExon	0.5	100	100	ENSMUST00000239222.2	ENSMUSG00000055313.16	Pgbd1	chr13	protein_coding	piggyBac transposable element derived 1
chr13	21607794;21612548	21612438;21617561	-	21607794	21617561	cassetteExon	0.5	100	100	ENSMUST00000239222.2	ENSMUSG00000055313.16	Pgbd1	chr13	protein_coding	piggyBac transposable element derived 1
chr13	21617694	21618521	-	21617712	21618521	A3SS	0.5	50	50	ENSMUST00000239222.2	ENSMUSG00000055313.16	Pgbd1	chr13	protein_coding	piggyBac transposable element derived 1
chr13	21607794	21614879	-	21607794	21617561	A5SS	0.33	50	50	ENSMUST00000239222.2	ENSMUSG00000055313.16	Pgbd1	chr13	protein_coding	piggyBac transposable element derived 1
chr13	21618841	21624529	-	21618841	21624930	A5SS	0.33	50	50	ENSMUST00000239222.2	ENSMUSG00000055313.16	Pgbd1	chr13	protein_coding	piggyBac transposable element derived 1
chr13	21618841	21624970	-	21618841	21624930	A5SS	0.33	50	50	ENSMUST00000239222.2	ENSMUSG00000055313.16	Pgbd1	chr13	protein_coding	piggyBac transposable element derived 1
chr13	21618841	21624970	-	21618841	21624529	5pMXE	0.33	50	50	ENSMUST00000099719.10	ENSMUSG00000055313.16	Pgbd1	chr13	protein_coding	piggyBac transposable element derived 1
chr13	21612532	21617561	-	21612548	21617561	A3SS	0.33	50	50	ENSMUST00000099719.10	ENSMUSG00000055313.16	Pgbd1	chr13	protein_coding	piggyBac transposable element derived 1
chr13	21607794	21614879	-	21607794	21612438	A5SS&ES	0.33	50	50	ENSMUST00000099719.10	ENSMUSG00000055313.16	Pgbd1	chr13	protein_coding	piggyBac transposable element derived 1
chr13	21633503	21633611	-	21632064	21633611	A3SS	0.5	50	50	ENSMUST00000032820.15	ENSMUSG00000022228.15	Zscan26	chr13	protein_coding	zinc finger and SCAN domain containing 26
chr13	21632064	21632337	-	21632064	21633611	A5SS	0.5	50	50	ENSMUST00000032820.15	ENSMUSG00000022228.15	Zscan26	chr13	protein_coding	zinc finger and SCAN domain containing 26
chr13	21663592	21665444	+	21663679	21665444	A5SS	0.5	50	50	ENSMUST00000062609.6	ENSMUSG00000054931.8	Zkscan4	chr13	protein_coding	zinc finger with KRAB and SCAN domains 4
chr13	21711188	21715115	-	21711191	21715115	A3SS	0.5	50	50	ENSMUST00000045228.12	ENSMUSG00000063894.16	Zkscan8	chr13	protein_coding	zinc finger with KRAB and SCAN domains 8
chr13	21706485	21709308	-	21705132	21709308	A3SS	0.5	50	50	ENSMUST00000224362.2	ENSMUSG00000063894.16	Zkscan8	chr13	protein_coding	zinc finger with KRAB and SCAN domains 8
chr13	21705132	21705956	-	21705132	21709308	A5SS	0.5	50	50	ENSMUST00000224362.2	ENSMUSG00000063894.16	Zkscan8	chr13	protein_coding	zinc finger with KRAB and SCAN domains 8
chr13	21722137	21726789	-	21722137	21726689	A5SS	0.5	50	50	ENSMUST00000205976.3	ENSMUSG00000048996.7	Olfr1366	chr13	protein_coding	olfactory receptor 1366
chr13	21758677;21761664	21761591;21765580	-	21758677	21765580	cassetteExon	0.5	100	100	ENSMUST00000206526.3	ENSMUSG00000046016.4	Olfr1364	chr13	protein_coding	olfactory receptor 1364
chr13	21859566	21861227	-	21859239	21861227	A3SS	0.5	50	50	ENSMUST00000205788.3	ENSMUSG00000108534.3	Olfr1360	chr13	protein_coding	olfactory receptor 1360
chr13	21882747	21887842	+	21882747	21887046	A3SS	0.5	50	50	ENSMUST00000214435.2	ENSMUSG00000108674.3	Olfr1359	chr13	protein_coding	olfactory receptor 1359
chr13	21992297	21993965	-	21992297	21992720	A5SS&ES	0.5	50	50	ENSMUST00000110469.2	ENSMUSG00000069307.8	H2bc23	chr13	protein_coding	H2B clustered histone 23
chr13	22019562	22019985	+	22018317	22019985	A5SS	0.5	50	50	ENSMUST00000180288.2	ENSMUSG00000069303.8	H2bc24	chr13	protein_coding	H2B clustered histone 24
chr13	22133956	22134373	+	22133956	22134404	A3SS	0.5	50	50	ENSMUST00000176511.8	ENSMUSG00000006720.17	Zfp184	chr13	protein_coding	zinc finger protein 184 (Kruppel-like)
chr13	22129399	22129726	+	22129369	22129726	A5SS	0.33	50	50	ENSMUST00000176511.8	ENSMUSG00000006720.17	Zfp184	chr13	protein_coding	zinc finger protein 184 (Kruppel-like)
chr13	22129588	22129726	+	22129369	22129726	A5SS	0.33	50	50	ENSMUST00000176511.8	ENSMUSG00000006720.17	Zfp184	chr13	protein_coding	zinc finger protein 184 (Kruppel-like)
chr13	22129399	22129726	+	22129588	22129726	A5SS	0.33	50	50	ENSMUST00000102978.8	ENSMUSG00000006720.17	Zfp184	chr13	protein_coding	zinc finger protein 184 (Kruppel-like)
chr13	22199118	22199423	+	22199071	22199423	A5SS	0.5	50	50	ENSMUST00000133204.8	ENSMUSG00000085827.9	Gm11290	chr13	lncRNA	predicted gene 11290
chr13	22198771	22198975	+	22198771	22200860	A3SS	0.5	50	50	ENSMUST00000147811.3	ENSMUSG00000085827.9	Gm11290	chr13	lncRNA	predicted gene 11290
chr13	22268731	22271835	+	22268731;22268990	22268892;22271835	ES	0.5	50	50	ENSMUST00000228243.2	ENSMUSG00000069299.3	Vmn1r188	chr13	protein_coding	vomeronasal 1 receptor 188
chr13	22287076	22289909	-	22287076	22289895	A5SS	0.5	50	50	ENSMUST00000227357.2	ENSMUSG00000099611.3	Vmn1r189	chr13	protein_coding	vomeronasal 1 receptor 189
chr13	22404114	22407175	-	22404338	22407175	A3SS	0.33	50	50	ENSMUST00000228303.2	ENSMUSG00000046932.3	Vmn1r193	chr13	protein_coding	vomeronasal 1 receptor 193
chr13	22404525	22407175	-	22404338	22407175	A3SS	0.33	50	50	ENSMUST00000228303.2	ENSMUSG00000046932.3	Vmn1r193	chr13	protein_coding	vomeronasal 1 receptor 193
chr13	22404525	22407175	-	22404114	22407175	A3SS	0.33	50	50	ENSMUST00000227457.2	ENSMUSG00000046932.3	Vmn1r193	chr13	protein_coding	vomeronasal 1 receptor 193
chr13	22476417	22477631	+	22476417	22477153	A3SS	0.33	50	50	ENSMUST00000228557.2	ENSMUSG00000069295.3	Vmn1r196	chr13	protein_coding	vomeronasal 1 receptor 196
chr13	22476417	22477821	+	22476417	22477153	A3SS	0.33	50	50	ENSMUST00000228557.2	ENSMUSG00000069295.3	Vmn1r196	chr13	protein_coding	vomeronasal 1 receptor 196
chr13	22476417	22477821	+	22476417	22477631	A3SS	0.33	50	50	ENSMUST00000226245.2	ENSMUSG00000069295.3	Vmn1r196	chr13	protein_coding	vomeronasal 1 receptor 196
chr13	22508921	22512042	+	22508921;22510563	22510396;22512042	ES	0.5	50	50	ENSMUST00000226225.2	ENSMUSG00000069294.3	Vmn1r197	chr13	protein_coding	vomeronasal 1 receptor 197
chr13	22534751	22538495	+	22534815	22538495	A5SS	0.5	50	50	ENSMUST00000226909.2	ENSMUSG00000095125.3	Vmn1r198	chr13	protein_coding	vomeronasal 1 receptor 198
chr13	22534751	22538495	+	22534751	22538700	A3SS	0.5	50	50	ENSMUST00000227167.2	ENSMUSG00000095125.3	Vmn1r198	chr13	protein_coding	vomeronasal 1 receptor 198
chr13	22564078	22566827	+	22564078	22566651	A3SS	0.5	50	50	ENSMUST00000227685.2	ENSMUSG00000069292.5	Vmn1r199	chr13	protein_coding	vomeronasal 1 receptor 199
chr13	22564064	22566827	+	22564078	22566827	A5SS	0.5	50	50	ENSMUST00000227689.2	ENSMUSG00000069292.5	Vmn1r199	chr13	protein_coding	vomeronasal 1 receptor 199
chr13	22578586	22579169	+	22578586	22579189	A3SS	0.33	50	50	ENSMUST00000226157.2	ENSMUSG00000101073.3	Vmn1r200	chr13	protein_coding	vomeronasal 1 receptor 200
chr13	22578586	22579245	+	22578586	22579189	A3SS	0.33	50	50	ENSMUST00000226157.2	ENSMUSG00000101073.3	Vmn1r200	chr13	protein_coding	vomeronasal 1 receptor 200
chr13	22578586	22579169	+	22578586	22579245	A3SS	0.33	50	50	ENSMUST00000227326.2	ENSMUSG00000101073.3	Vmn1r200	chr13	protein_coding	vomeronasal 1 receptor 200
chr13	22656232	22658178	+	22656168	22658178	A5SS	0.5	50	50	ENSMUST00000226330.2	ENSMUSG00000094898.3	Vmn1r201	chr13	protein_coding	vomeronasal 1 receptor 201
chr13	22702342	22708009	+	22702356	22708009	A5SS	0.5	50	50	ENSMUST00000227520.2	ENSMUSG00000069289.3	Vmn1r203	chr13	protein_coding	vomeronasal 1 receptor 203
chr13	22911018;22912495	22912407;22913618	-	22911018	22913618	cassetteExon	0.5	100	100	ENSMUST00000237024.2	ENSMUSG00000084136.5	Vmn1r207	chr13	protein_coding	vomeronasal 1 receptor 207
chr13	22990915;22992290	22992202;22993421	-	22990915	22993421	cassetteExon	0.5	100	100	ENSMUST00000227038.2	ENSMUSG00000071491.3	Vmn1r209	chr13	protein_coding	vomeronasal 1 receptor 209
chr13	23193206	23195667	+	23193058	23195667	A5SS	0.5	50	50	ENSMUST00000228031.2	ENSMUSG00000060024.3	Vmn1r213	chr13	protein_coding	vomeronasal 1 receptor 213
chr13	23214780	23218429	+	23214794	23218429	A5SS	0.5	50	50	ENSMUST00000227652.2	ENSMUSG00000061829.5	Vmn1r214	chr13	protein_coding	vomeronasal 1 receptor 214
chr13	23298980	23302220	-	23298980	23301972	5pMXE	0.5	50	50	ENSMUST00000228656.2	ENSMUSG00000115791.2	Vmn1r217	chr13	protein_coding	vomeronasal 1 receptor 217
chr13	23317466	23320867	+	23317466	23320061	A3SS	0.33	50	50	ENSMUST00000227050.2	ENSMUSG00000115020.2	Vmn1r218	chr13	protein_coding	vomeronasal 1 receptor 218
chr13	23317466	23321991	+	23317466	23320061	A3SS	0.33	50	50	ENSMUST00000227050.2	ENSMUSG00000115020.2	Vmn1r218	chr13	protein_coding	vomeronasal 1 receptor 218
chr13	23317532	23320061	+	23317466	23320061	A5SS	0.5	50	50	ENSMUST00000227050.2	ENSMUSG00000115020.2	Vmn1r218	chr13	protein_coding	vomeronasal 1 receptor 218
chr13	23317466	23321991	+	23317466	23320867	A3SS	0.33	50	50	ENSMUST00000227160.2	ENSMUSG00000115020.2	Vmn1r218	chr13	protein_coding	vomeronasal 1 receptor 218
chr13	23317532	23320867	+	23317466	23320867	A5SS	0.5	50	50	ENSMUST00000227160.2	ENSMUSG00000115020.2	Vmn1r218	chr13	protein_coding	vomeronasal 1 receptor 218
chr13	23317532	23320061	+	23317532	23320867	A3SS	0.5	50	50	ENSMUST00000227741.2	ENSMUSG00000115020.2	Vmn1r218	chr13	protein_coding	vomeronasal 1 receptor 218
chr13	23343868;23344822	23344764;23346733	+	23343868	23346733	cassetteExon	0.5	100	100	ENSMUST00000226845.2	ENSMUSG00000061376.3	Vmn1r219	chr13	protein_coding	vomeronasal 1 receptor 219
chr13	23343882	23346733	+	23343868	23346733	A5SS	0.33	50	50	ENSMUST00000226845.2	ENSMUSG00000061376.3	Vmn1r219	chr13	protein_coding	vomeronasal 1 receptor 219
chr13	23344822	23346733	+	23343882	23346733	A5SS	0.33	50	50	ENSMUST00000228666.2	ENSMUSG00000061376.3	Vmn1r219	chr13	protein_coding	vomeronasal 1 receptor 219
chr13	23343868	23346733	+	23343868	23344764	A3SS	0.5	50	50	ENSMUST00000227388.2	ENSMUSG00000061376.3	Vmn1r219	chr13	protein_coding	vomeronasal 1 receptor 219
chr13	23343868	23346733	+	23344822	23346733	5pMXE	0.33	50	50	ENSMUST00000228113.2	ENSMUSG00000061376.3	Vmn1r219	chr13	protein_coding	vomeronasal 1 receptor 219
chr13	23368774	23371999	-	23370385	23371999	A3SS	0.33	50	50	ENSMUST00000228239.2	ENSMUSG00000096099.3	Vmn1r220	chr13	protein_coding	vomeronasal 1 receptor 220
chr13	23370390	23371999	-	23370385	23371999	A3SS	0.33	50	50	ENSMUST00000228239.2	ENSMUSG00000096099.3	Vmn1r220	chr13	protein_coding	vomeronasal 1 receptor 220
chr13	23370390	23371999	-	23368774	23371999	A3SS	0.33	50	50	ENSMUST00000227950.2	ENSMUSG00000096099.3	Vmn1r220	chr13	protein_coding	vomeronasal 1 receptor 220
chr13	23368774	23371985	-	23368774	23371999	A5SS	0.5	50	50	ENSMUST00000227950.2	ENSMUSG00000096099.3	Vmn1r220	chr13	protein_coding	vomeronasal 1 receptor 220
chr13	23370390	23371985	-	23368774	23371985	A3SS	0.5	50	50	ENSMUST00000226651.2	ENSMUSG00000096099.3	Vmn1r220	chr13	protein_coding	vomeronasal 1 receptor 220
chr13	23370390	23371999	-	23370390	23371985	A5SS	0.5	50	50	ENSMUST00000227679.2	ENSMUSG00000096099.3	Vmn1r220	chr13	protein_coding	vomeronasal 1 receptor 220
chr13	23417424	23420080	-	23417424	23419840	A5SS	0.5	50	50	ENSMUST00000235574.2	ENSMUSG00000061022.6	Vmn1r222	chr13	protein_coding	vomeronasal 1 receptor 222
chr13	23431335;23431831	23431714;23433081	+	23431335	23433081	cassetteExon	0.5	100	100	ENSMUST00000235331.2	ENSMUSG00000069280.3	Vmn1r223	chr13	protein_coding	vomeronasal 1 receptor 223
chr13	23432321	23433081	+	23431335	23433081	A5SS	0.33	50	50	ENSMUST00000235331.2	ENSMUSG00000069280.3	Vmn1r223	chr13	protein_coding	vomeronasal 1 receptor 223
chr13	23432321	23433081	+	23431831	23433081	A5SS	0.33	50	50	ENSMUST00000236495.2	ENSMUSG00000069280.3	Vmn1r223	chr13	protein_coding	vomeronasal 1 receptor 223
chr13	23431335	23433081	+	23431335;23432321	23431714;23433081	ES	0.33	50	50	ENSMUST00000238002.2	ENSMUSG00000069280.3	Vmn1r223	chr13	protein_coding	vomeronasal 1 receptor 223
chr13	23541883;23546824	23546750;23546973	-	23541883	23546973	cassetteExon	0.5	100	100	ENSMUST00000050101.9	ENSMUSG00000046351.12	Zfp322a	chr13	protein_coding	zinc finger protein 322A
chr13	23552375	23553027	-	23552375	23553305	A5SS	0.5	50	50	ENSMUST00000050101.9	ENSMUSG00000046351.12	Zfp322a	chr13	protein_coding	zinc finger protein 322A
chr13	23663011	23664737	-	23663011;23664646	23664620;23664737	ES	0.5	50	50	ENSMUST00000041541.11	ENSMUSG00000053216.16	Btn2a2	chr13	protein_coding	butyrophilin, subfamily 2, member A2
chr13	23672132	23672865	-	23672132	23672806	A5SS	0.5	50	50	ENSMUST00000041541.11	ENSMUSG00000053216.16	Btn2a2	chr13	protein_coding	butyrophilin, subfamily 2, member A2
chr13	23769949	23804899	-	23769953	23804899	A3SS	0.5	50	50	ENSMUST00000091704.7	ENSMUSG00000047246.8	H2bc6	chr13	protein_coding	H2B clustered histone 6
chr13	23891049	23894610	-	23891049;23892274	23892011;23894610	ES	0.33	50	50	ENSMUST00000091706.14	ENSMUSG00000006611.16	Hfe	chr13	protein_coding	homeostatic iron regulator
chr13	23890119	23894610	-	23890119;23891049	23890750;23894610	ES	0.33	50	50	ENSMUST00000091707.13	ENSMUSG00000006611.16	Hfe	chr13	protein_coding	homeostatic iron regulator
chr13	23892274	23894610	-	23890119	23894610	A3SS	0.33	50	50	ENSMUST00000006787.8	ENSMUSG00000006611.16	Hfe	chr13	protein_coding	homeostatic iron regulator
chr13	23972424	23973441	+	23972424;23973340	23973318;23973441	ES	0.5	50	50	ENSMUST00000226039.2	ENSMUSG00000064140.4	Trim38	chr13	protein_coding	tripartite motif-containing 38
chr13	23999256;24001590	24001504;24003001	+	23999256	24003001	cassetteExon	0.5	100	100	ENSMUST00000141717.8	ENSMUSG00000036110.15	Slc17a2	chr13	protein_coding	solute carrier family 17 (sodium phosphate), member 2
chr13	23999082	23999207	+	23999082	23999169	A3SS	0.5	50	50	ENSMUST00000141717.8	ENSMUSG00000036110.15	Slc17a2	chr13	protein_coding	solute carrier family 17 (sodium phosphate), member 2
chr13	23991075	23994701	+	23991334	23994701	A5SS&ES	0.5	50	50	ENSMUST00000141717.8	ENSMUSG00000036110.15	Slc17a2	chr13	protein_coding	solute carrier family 17 (sodium phosphate), member 2
chr13	24005058	24006278	+	24005092	24006278	A5SS	0.5	50	50	ENSMUST00000141717.8	ENSMUSG00000036110.15	Slc17a2	chr13	protein_coding	solute carrier family 17 (sodium phosphate), member 2
chr13	24023648	24029320	+	24023648;24026523	24026400;24029320	ES	0.5	50	50	ENSMUST00000039721.14	ENSMUSG00000036083.16	Slc17a3	chr13	protein_coding	solute carrier family 17 (sodium phosphate), member 3
chr13	24029531	24030861	+	24029531;24030427	24030194;24030861	ES	0.5	50	50	ENSMUST00000039721.14	ENSMUSG00000036083.16	Slc17a3	chr13	protein_coding	solute carrier family 17 (sodium phosphate), member 3
chr13	24054334	24056542	+	24052047	24056542	A5SS	0.33	50	50	ENSMUST00000130211.8	ENSMUSG00000021335.14	Slc17a1	chr13	protein_coding	solute carrier family 17 (sodium phosphate), member 1
chr13	24054426	24056542	+	24052047	24056542	A5SS	0.33	50	50	ENSMUST00000130211.8	ENSMUSG00000021335.14	Slc17a1	chr13	protein_coding	solute carrier family 17 (sodium phosphate), member 1
chr13	24054426	24056542	+	24054334	24056542	A5SS	0.33	50	50	ENSMUST00000110413.8	ENSMUSG00000021335.14	Slc17a1	chr13	protein_coding	solute carrier family 17 (sodium phosphate), member 1
chr13	24058597	24059472	+	24058748	24059472	A5SS	0.5	50	50	ENSMUST00000110413.8	ENSMUSG00000021335.14	Slc17a1	chr13	protein_coding	solute carrier family 17 (sodium phosphate), member 1
chr13	24088781;24089313	24089226;24089400	-	24088781	24089400	cassetteExon	0.5	100	100	ENSMUST00000225797.2	ENSMUSG00000021336.18	Slc17a4	chr13	protein_coding	solute carrier family 17 (sodium phosphate), member 4
chr13	24082852	24084439	-	24082892	24084439	A3SS	0.5	50	50	ENSMUST00000225797.2	ENSMUSG00000021336.18	Slc17a4	chr13	protein_coding	solute carrier family 17 (sodium phosphate), member 4
chr13	24085806	24085885	-	24085806	24085881	A5SS	0.5	50	50	ENSMUST00000225797.2	ENSMUSG00000021336.18	Slc17a4	chr13	protein_coding	solute carrier family 17 (sodium phosphate), member 4
chr13	24088781	24089400	-	24089313	24089400	A3SS	0.5	50	50	ENSMUST00000224360.2	ENSMUSG00000021336.18	Slc17a4	chr13	protein_coding	solute carrier family 17 (sodium phosphate), member 4
chr13	24137967	24139457	-	24137967	24143661	A5SS	0.5	50	50	ENSMUST00000021770.8	ENSMUSG00000021337.9	Scgn	chr13	protein_coding	secretagogin, EF-hand calcium binding protein
chr13	24150878	24151059	-	24150878	24157943	A5SS	0.5	50	50	ENSMUST00000021770.8	ENSMUSG00000021337.9	Scgn	chr13	protein_coding	secretagogin, EF-hand calcium binding protein
chr13	24197443	24204030	-	24197443;24203696	24203547;24204030	ES	0.5	50	50	ENSMUST00000125901.8	ENSMUSG00000021338.18	Carmil1	chr13	protein_coding	capping protein regulator and myosin 1 linker 1
chr13	24229065	24248560	-	24229065;24233643	24233626;24248560	ES	0.5	50	50	ENSMUST00000125901.8	ENSMUSG00000021338.18	Carmil1	chr13	protein_coding	capping protein regulator and myosin 1 linker 1
chr13	24283646	24290292	-	24283646;24286066	24286055;24290292	ES	0.5	50	50	ENSMUST00000125901.8	ENSMUSG00000021338.18	Carmil1	chr13	protein_coding	capping protein regulator and myosin 1 linker 1
chr13	24203693	24206479	-	24204054	24206479	A3SS&ES	0.33	50	50	ENSMUST00000125901.8	ENSMUSG00000021338.18	Carmil1	chr13	protein_coding	capping protein regulator and myosin 1 linker 1
chr13	24229065	24243227	-	24229065	24233626	A5SS&ES	0.33	50	50	ENSMUST00000125901.8	ENSMUSG00000021338.18	Carmil1	chr13	protein_coding	capping protein regulator and myosin 1 linker 1
chr13	24197443	24206479	-	24197443;24203693	24203547;24206479	ES	0.33	50	50	ENSMUST00000151566.2	ENSMUSG00000021338.18	Carmil1	chr13	protein_coding	capping protein regulator and myosin 1 linker 1
chr13	24197443;24204054	24204030;24206479	-	24197443;24203693	24203547;24206479	MXE	0.5	100	100	ENSMUST00000151566.2	ENSMUSG00000021338.18	Carmil1	chr13	protein_coding	capping protein regulator and myosin 1 linker 1
chr13	24197443;24204054	24204030;24206479	-	24197443	24206479	cassetteExon	0.5	100	100	ENSMUST00000072889.12	ENSMUSG00000021338.18	Carmil1	chr13	protein_coding	capping protein regulator and myosin 1 linker 1
chr13	24229065	24243227	-	24229065	24248560	A5SS	0.33	50	50	ENSMUST00000072889.12	ENSMUSG00000021338.18	Carmil1	chr13	protein_coding	capping protein regulator and myosin 1 linker 1
chr13	24296074	24296781	-	24296074	24299458	A5SS	0.5	50	50	ENSMUST00000072889.12	ENSMUSG00000021338.18	Carmil1	chr13	protein_coding	capping protein regulator and myosin 1 linker 1
chr13	24362240	24390021	-	24362240	24460440	A5SS	0.33	50	50	ENSMUST00000072889.12	ENSMUSG00000021338.18	Carmil1	chr13	protein_coding	capping protein regulator and myosin 1 linker 1
chr13	24362240	24424320	-	24362240	24460440	A5SS	0.33	50	50	ENSMUST00000072889.12	ENSMUSG00000021338.18	Carmil1	chr13	protein_coding	capping protein regulator and myosin 1 linker 1
chr13	24460537	24464272	-	24460537	24464544	A5SS	0.5	50	50	ENSMUST00000072889.12	ENSMUSG00000021338.18	Carmil1	chr13	protein_coding	capping protein regulator and myosin 1 linker 1
chr13	24338734	24338967	-	24338734	24339038	A5SS	0.5	50	50	ENSMUST00000144159.2	ENSMUSG00000021338.18	Carmil1	chr13	protein_coding	capping protein regulator and myosin 1 linker 1
chr13	24362240	24424320	-	24362240	24390021	5pMXE	0.33	50	50	ENSMUST00000123076.8	ENSMUSG00000021338.18	Carmil1	chr13	protein_coding	capping protein regulator and myosin 1 linker 1
chr13	24601407	24612812	+	24601407;24606674	24606583;24612812	ES	0.5	50	50	ENSMUST00000224953.2	ENSMUSG00000016756.18	Cmah	chr13	protein_coding	cytidine monophospho-N-acetylneuraminic acid hydroxylase
chr13	24612921	24619083	+	24612921;24614661	24614471;24619083	ES	0.5	50	50	ENSMUST00000224953.2	ENSMUSG00000016756.18	Cmah	chr13	protein_coding	cytidine monophospho-N-acetylneuraminic acid hydroxylase
chr13	24614661	24619590	+	24614661;24619230	24619083;24619590	ES	0.5	50	50	ENSMUST00000224953.2	ENSMUSG00000016756.18	Cmah	chr13	protein_coding	cytidine monophospho-N-acetylneuraminic acid hydroxylase
chr13	24619671	24623105	+	24619671;24620740	24620603;24623105	ES	0.5	50	50	ENSMUST00000224953.2	ENSMUSG00000016756.18	Cmah	chr13	protein_coding	cytidine monophospho-N-acetylneuraminic acid hydroxylase
chr13	24511471;24514439	24514278;24579182	+	24511471	24579182	cassetteExon	0.5	100	100	ENSMUST00000224953.2	ENSMUSG00000016756.18	Cmah	chr13	protein_coding	cytidine monophospho-N-acetylneuraminic acid hydroxylase
chr13	24579470	24601204	+	24579470	24600884	A3SS&ES	0.5	50	50	ENSMUST00000224953.2	ENSMUSG00000016756.18	Cmah	chr13	protein_coding	cytidine monophospho-N-acetylneuraminic acid hydroxylase
chr13	24560216	24579182	+	24511471	24579182	A5SS	0.33	50	50	ENSMUST00000224953.2	ENSMUSG00000016756.18	Cmah	chr13	protein_coding	cytidine monophospho-N-acetylneuraminic acid hydroxylase
chr13	24599133	24600884	+	24579470	24600884	A5SS	0.5	50	50	ENSMUST00000224953.2	ENSMUSG00000016756.18	Cmah	chr13	protein_coding	cytidine monophospho-N-acetylneuraminic acid hydroxylase
chr13	24601056	24601207	+	24600993	24601207	A5SS	0.5	50	50	ENSMUST00000224953.2	ENSMUSG00000016756.18	Cmah	chr13	protein_coding	cytidine monophospho-N-acetylneuraminic acid hydroxylase
chr13	24560216	24579182	+	24514439	24579182	A5SS	0.33	50	50	ENSMUST00000050859.13	ENSMUSG00000016756.18	Cmah	chr13	protein_coding	cytidine monophospho-N-acetylneuraminic acid hydroxylase
chr13	24619671	24623105	+	24619671	24620603	3pMXE	0.5	50	50	ENSMUST00000142882.2	ENSMUSG00000016756.18	Cmah	chr13	protein_coding	cytidine monophospho-N-acetylneuraminic acid hydroxylase
chr13	24612921;24619230	24619083;24619590	+	24612921;24614661	24614471;24619590	MXE	0.5	100	100	ENSMUST00000142882.2	ENSMUSG00000016756.18	Cmah	chr13	protein_coding	cytidine monophospho-N-acetylneuraminic acid hydroxylase
chr13	24555386;24556128	24556012;24559330	-	24555386	24559330	cassetteExon	0.5	100	100	ENSMUST00000224879.2	ENSMUSG00000084788.3	Gm11342	chr13	lncRNA	predicted gene 11342
chr13	24554969	24555314	-	24520934	24555314	A3SS	0.5	50	50	ENSMUST00000224879.2	ENSMUSG00000084788.3	Gm11342	chr13	lncRNA	predicted gene 11342
chr13	24559489	24559898	-	24559489	24598711	A5SS	0.5	50	50	ENSMUST00000224879.2	ENSMUSG00000084788.3	Gm11342	chr13	lncRNA	predicted gene 11342
chr13	24885713	24890074	+	24885713	24888753	3pMXE	0.5	50	50	ENSMUST00000238974.2	ENSMUSG00000036006.21	Ripor2	chr13	protein_coding	RHO family interacting cell polarization regulator 2
chr13	24879685;24880579	24880290;24885045	+	24879685	24885045	cassetteExon	0.5	100	100	ENSMUST00000238974.2	ENSMUSG00000036006.21	Ripor2	chr13	protein_coding	RHO family interacting cell polarization regulator 2
chr13	24879685;24880579	24880454;24885045	+	24879685	24885045	cassetteExon	0.5	100	100	ENSMUST00000238974.2	ENSMUSG00000036006.21	Ripor2	chr13	protein_coding	RHO family interacting cell polarization regulator 2
chr13	24766328	24853943	+	24685670	24853943	A5SS	0.2	50	50	ENSMUST00000238974.2	ENSMUSG00000036006.21	Ripor2	chr13	protein_coding	RHO family interacting cell polarization regulator 2
chr13	24798730	24853943	+	24685670	24853943	A5SS	0.2	50	50	ENSMUST00000238974.2	ENSMUSG00000036006.21	Ripor2	chr13	protein_coding	RHO family interacting cell polarization regulator 2
chr13	24822919	24853943	+	24685670	24853943	A5SS	0.2	50	50	ENSMUST00000238974.2	ENSMUSG00000036006.21	Ripor2	chr13	protein_coding	RHO family interacting cell polarization regulator 2
chr13	24849631	24853943	+	24685670	24853943	A5SS	0.2	50	50	ENSMUST00000238974.2	ENSMUSG00000036006.21	Ripor2	chr13	protein_coding	RHO family interacting cell polarization regulator 2
chr13	24879685	24880290	+	24879685	24880454	A3SS	0.33	50	50	ENSMUST00000110383.8	ENSMUSG00000036006.21	Ripor2	chr13	protein_coding	RHO family interacting cell polarization regulator 2
chr13	24798730	24853943	+	24766328	24853943	A5SS	0.2	50	50	ENSMUST00000110383.8	ENSMUSG00000036006.21	Ripor2	chr13	protein_coding	RHO family interacting cell polarization regulator 2
chr13	24822919	24853943	+	24766328	24853943	A5SS	0.2	50	50	ENSMUST00000110383.8	ENSMUSG00000036006.21	Ripor2	chr13	protein_coding	RHO family interacting cell polarization regulator 2
chr13	24849631	24853943	+	24766328	24853943	A5SS	0.2	50	50	ENSMUST00000110383.8	ENSMUSG00000036006.21	Ripor2	chr13	protein_coding	RHO family interacting cell polarization regulator 2
chr13	24798730;24849631	24849392;24853943	+	24798730	24853943	cassetteExon	0.5	100	100	ENSMUST00000134370.8	ENSMUSG00000036006.21	Ripor2	chr13	protein_coding	RHO family interacting cell polarization regulator 2
chr13	24822919	24853943	+	24798730	24853943	A5SS	0.2	50	50	ENSMUST00000134370.8	ENSMUSG00000036006.21	Ripor2	chr13	protein_coding	RHO family interacting cell polarization regulator 2
chr13	24822919	24853943	+	24849631	24853943	A5SS&ES	0.33	50	50	ENSMUST00000132689.8	ENSMUSG00000036006.21	Ripor2	chr13	protein_coding	RHO family interacting cell polarization regulator 2
chr13	24879685	24885045	+	24879685	24880290	3pMXE	0.33	50	50	ENSMUST00000058009.16	ENSMUSG00000036006.21	Ripor2	chr13	protein_coding	RHO family interacting cell polarization regulator 2
chr13	24788445	24788613	-	24783084	24788613	A3SS	0.5	50	50	ENSMUST00000149751.3	ENSMUSG00000085603.4	Gm11346	chr13	transcribed_processed_pseudogene	predicted gene 11346
chr13	24783084	24787566	-	24783084	24788613	A5SS	0.5	50	50	ENSMUST00000149751.3	ENSMUSG00000085603.4	Gm11346	chr13	transcribed_processed_pseudogene	predicted gene 11346
chr13	24941651	24944143	-	24941656	24944143	A3SS	0.5	50	50	ENSMUST00000006898.10	ENSMUSG00000006715.12	Gmnn	chr13	protein_coding	geminin
chr13	24944200	24945184	-	24944200	24945570	A5SS	0.25	50	50	ENSMUST00000006898.10	ENSMUSG00000006715.12	Gmnn	chr13	protein_coding	geminin
chr13	24944200	24945343	-	24944200	24945570	A5SS	0.25	50	50	ENSMUST00000006898.10	ENSMUSG00000006715.12	Gmnn	chr13	protein_coding	geminin
chr13	24944200	24945796	-	24944200	24945570	A5SS	0.25	50	50	ENSMUST00000006898.10	ENSMUSG00000006715.12	Gmnn	chr13	protein_coding	geminin
chr13	24944200	24945184	-	24944200	24945796	A5SS	0.25	50	50	ENSMUST00000110382.9	ENSMUSG00000006715.12	Gmnn	chr13	protein_coding	geminin
chr13	24944200	24945343	-	24944200	24945796	A5SS	0.25	50	50	ENSMUST00000110382.9	ENSMUSG00000006715.12	Gmnn	chr13	protein_coding	geminin
chr13	24944200	24945184	-	24944200	24945343	A5SS	0.25	50	50	ENSMUST00000175689.8	ENSMUSG00000006715.12	Gmnn	chr13	protein_coding	geminin
chr13	24986143	24988765	+	24987492	24988765	A5SS	0.5	50	50	ENSMUST00000019276.12	ENSMUSG00000019132.12	BC005537	chr13	protein_coding	cDNA sequence BC005537
chr13	25004882	25015462	-	25004882	25015209	A5SS	0.5	50	50	ENSMUST00000006900.7	ENSMUSG00000006717.8	Acot13	chr13	protein_coding	acyl-CoA thioesterase 13
chr13	25015912	25019999	+	25015912;25016078	25015993;25019999	ES	0.5	50	50	ENSMUST00000038039.3	ENSMUSG00000035958.4	Tdp2	chr13	protein_coding	tyrosyl-DNA phosphodiesterase 2
chr13	25016078	25020838	+	25016078;25020169	25019999;25020838	ES	0.33	50	50	ENSMUST00000038039.3	ENSMUSG00000035958.4	Tdp2	chr13	protein_coding	tyrosyl-DNA phosphodiesterase 2
chr13	25016078;25016809	25016672;25020838	+	25016078;25020169	25019999;25020838	MXE	0.5	100	100	ENSMUST00000038039.3	ENSMUSG00000035958.4	Tdp2	chr13	protein_coding	tyrosyl-DNA phosphodiesterase 2
chr13	25015912;25016078	25015993;25020838	+	25015912;25020169	25019999;25020838	MXE	0.5	100	100	ENSMUST00000226055.2	ENSMUSG00000035958.4	Tdp2	chr13	protein_coding	tyrosyl-DNA phosphodiesterase 2
chr13	25016809	25020838	+	25020169	25020838	A5SS&ES	0.33	50	50	ENSMUST00000226055.2	ENSMUSG00000035958.4	Tdp2	chr13	protein_coding	tyrosyl-DNA phosphodiesterase 2
chr13	25015912	25019999	+	25015912	25015993	3pMXE	0.5	50	50	ENSMUST00000223804.2	ENSMUSG00000035958.4	Tdp2	chr13	protein_coding	tyrosyl-DNA phosphodiesterase 2
chr13	25016078;25016809	25016672;25020838	+	25016078	25020838	cassetteExon	0.5	100	100	ENSMUST00000225138.2	ENSMUSG00000035958.4	Tdp2	chr13	protein_coding	tyrosyl-DNA phosphodiesterase 2
chr13	25015912;25020169	25019999;25020838	+	25015912;25016809	25015993;25020838	MXE	0.5	100	100	ENSMUST00000130788.2	ENSMUSG00000035958.4	Tdp2	chr13	protein_coding	tyrosyl-DNA phosphodiesterase 2
chr13	25015912	25019999	+	25016078	25019999	5pMXE	0.5	50	50	ENSMUST00000225490.2	ENSMUSG00000035958.4	Tdp2	chr13	protein_coding	tyrosyl-DNA phosphodiesterase 2
chr13	25064904;25066662	25066524;25067724	+	25064904	25067724	cassetteExon	0.5	100	100	ENSMUST00000141572.8	ENSMUSG00000006711.16	D130043K22Rik	chr13	protein_coding	RIKEN cDNA D130043K22 gene
chr13	25064608	25064753	+	25063727	25064753	A5SS	0.5	50	50	ENSMUST00000141572.8	ENSMUSG00000006711.16	D130043K22Rik	chr13	protein_coding	RIKEN cDNA D130043K22 gene
chr13	25077265	25077344	+	25073897	25077344	A5SS	0.5	50	50	ENSMUST00000141572.8	ENSMUSG00000006711.16	D130043K22Rik	chr13	protein_coding	RIKEN cDNA D130043K22 gene
chr13	25064904	25067724	+	25064904	25066524	3pMXE	0.5	50	50	ENSMUST00000169411.2	ENSMUSG00000006711.16	D130043K22Rik	chr13	protein_coding	RIKEN cDNA D130043K22 gene
chr13	25089691;25094749	25094353;25095580	+	25089691	25095580	cassetteExon	0.5	100	100	ENSMUST00000151220.2	ENSMUSG00000086796.3	4932702P03Rik	chr13	lncRNA	RIKEN cDNA 4932702P03 gene
chr13	25089691	25089895	+	25089691	25095580	A3SS	0.33	50	50	ENSMUST00000151220.2	ENSMUSG00000086796.3	4932702P03Rik	chr13	lncRNA	RIKEN cDNA 4932702P03 gene
chr13	25089691	25094353	+	25089691	25089895	3pMXE	0.33	50	50	ENSMUST00000138447.2	ENSMUSG00000086796.3	4932702P03Rik	chr13	lncRNA	RIKEN cDNA 4932702P03 gene
chr13	25146410	25146573	+	25146410	25146610	A3SS	0.5	50	50	ENSMUST00000021773.13	ENSMUSG00000021340.14	Gpld1	chr13	protein_coding	glycosylphosphatidylinositol specific phospholipase D1
chr13	25139907	25140035	+	25139195	25140035	A5SS	0.5	50	50	ENSMUST00000021773.13	ENSMUSG00000021340.14	Gpld1	chr13	protein_coding	glycosylphosphatidylinositol specific phospholipase D1
chr13	25202576	25202887	-	25202576	25204065	A5SS	0.5	50	50	ENSMUST00000021772.4	ENSMUSG00000021339.5	Mrs2	chr13	protein_coding	MRS2 magnesium transporter
chr13	25303389	25371659	+	25303389	25304348	3pMXE	0.5	50	50	ENSMUST00000036932.15	ENSMUSG00000035910.16	Dcdc2a	chr13	protein_coding	doublecortin domain containing 2a
chr13	25280436	25286316	+	25245272	25286316	A5SS	0.5	50	50	ENSMUST00000036932.15	ENSMUSG00000035910.16	Dcdc2a	chr13	protein_coding	doublecortin domain containing 2a
chr13	25371571	25371659	+	25303389	25371659	A5SS	0.5	50	50	ENSMUST00000069614.7	ENSMUSG00000035910.16	Dcdc2a	chr13	protein_coding	doublecortin domain containing 2a
chr13	25452073;25452656	25452536;25453825	-	25452073	25453825	cassetteExon	0.5	100	100	ENSMUST00000057866.13	ENSMUSG00000048978.15	Nrsn1	chr13	protein_coding	neurensin 1
chr13	25446382	25446538	-	25446382	25452005	A5SS	0.5	50	50	ENSMUST00000057866.13	ENSMUSG00000048978.15	Nrsn1	chr13	protein_coding	neurensin 1
chr13	26114947	26170086	-	26114947	26150264	5pMXE	0.5	50	50	ENSMUST00000139335.3	ENSMUSG00000086531.3	Gm11351	chr13	lncRNA	predicted gene 11351
chr13	26490547	26496104	-	26470320	26496104	A3SS	0.5	50	50	ENSMUST00000154703.3	ENSMUSG00000084811.3	1700092E19Rik	chr13	lncRNA	RIKEN cDNA 1700092E19 gene
chr13	27241640	27243368	+	27241640	27243365	A3SS	0.5	50	50	ENSMUST00000110369.10	ENSMUSG00000021342.15	Prl	chr13	protein_coding	prolactin
chr13	27278266	27278838	+	27278266	27278835	A3SS	0.5	50	50	ENSMUST00000225330.2	ENSMUSG00000057170.7	Prl3d1	chr13	protein_coding	prolactin family 3, subfamily d, member 1
chr13	27305755	27306306	+	27305755	27306309	A3SS	0.5	50	50	ENSMUST00000080755.12	ENSMUSG00000062737.14	Prl3d2	chr13	protein_coding	prolactin family 3, subfamily d, member 1
chr13	27340850	27341399	+	27340850	27341402	A3SS	0.5	50	50	ENSMUST00000073601.5	ENSMUSG00000062201.5	Prl3d3	chr13	protein_coding	prolactin family 3, subfamily d, member 3
chr13	27382992	27383307	+	27380719	27383307	A5SS	0.5	50	50	ENSMUST00000018066.13	ENSMUSG00000017922.15	Prl3c1	chr13	protein_coding	prolactin family 3, subfamily c, member 1
chr13	27498219	27499262	+	27496675	27499262	A5SS	0.5	50	50	ENSMUST00000091680.9	ENSMUSG00000069259.11	Prl6a1	chr13	protein_coding	prolactin family 6, subfamily a, member 1
chr13	27535080	27537859	+	27535080;27536913	27536734;27537859	ES	0.5	50	50	ENSMUST00000018403.8	ENSMUSG00000018259.14	Prl8a2	chr13	protein_coding	prolactin family 8, subfamily a, member 2
chr13	27529747	27532818	+	27529747	27532815	A3SS	0.5	50	50	ENSMUST00000018403.8	ENSMUSG00000018259.14	Prl8a2	chr13	protein_coding	prolactin family 8, subfamily a, member 2
chr13	27567641	27569096	-	27567620	27569096	A3SS	0.5	50	50	ENSMUST00000102954.10	ENSMUSG00000069258.11	Prl2b1	chr13	protein_coding	prolactin family 2, subfamily b, member 1
chr13	27618314;27619471	27619367;27620172	-	27618314	27620172	cassetteExon	0.5	100	100	ENSMUST00000080762.12	ENSMUSG00000021345.17	Prl8a6	chr13	protein_coding	prolactin family 8, subfamily a, member 6
chr13	27621194	27622541	-	27621197	27622541	A3SS	0.5	50	50	ENSMUST00000080762.12	ENSMUSG00000021345.17	Prl8a6	chr13	protein_coding	prolactin family 8, subfamily a, member 6
chr13	27695600;27696808	27696594;27697107	-	27695600	27697107	cassetteExon	0.5	100	100	ENSMUST00000110350.9	ENSMUSG00000021346.15	Prl8a8	chr13	protein_coding	prolactin family 8, subfamily a, member 81
chr13	27695597	27697107	-	27695600	27697107	A3SS	0.33	50	50	ENSMUST00000110350.9	ENSMUSG00000021346.15	Prl8a8	chr13	protein_coding	prolactin family 8, subfamily a, member 81
chr13	27695597	27697107	-	27695597;27696808	27696594;27697107	ES	0.33	50	50	ENSMUST00000224072.2	ENSMUSG00000021346.15	Prl8a8	chr13	protein_coding	prolactin family 8, subfamily a, member 81
chr13	27695600	27696594	-	27695597	27696594	A3SS	0.5	50	50	ENSMUST00000224072.2	ENSMUSG00000021346.15	Prl8a8	chr13	protein_coding	prolactin family 8, subfamily a, member 81
chr13	27695600	27697107	-	27696808	27697107	A3SS&ES	0.33	50	50	ENSMUST00000224072.2	ENSMUSG00000021346.15	Prl8a8	chr13	protein_coding	prolactin family 8, subfamily a, member 81
chr13	27695597	27697107	-	27696808	27697107	A3SS&ES	0.33	50	50	ENSMUST00000223621.2	ENSMUSG00000021346.15	Prl8a8	chr13	protein_coding	prolactin family 8, subfamily a, member 81
chr13	27824799	27826403	-	27824802	27826403	A3SS	0.5	50	50	ENSMUST00000095924.11	ENSMUSG00000006488.18	Prl7a1	chr13	protein_coding	prolactin family 7, subfamily a, member 1
chr13	27898476	27900622	-	27898479	27900622	A3SS	0.33	50	50	ENSMUST00000224026.2	ENSMUSG00000021348.4	Prl7d1	chr13	protein_coding	prolactin family 7, subfamily d, member 1
chr13	27900517	27900622	-	27898479	27900622	A3SS	0.33	50	50	ENSMUST00000224026.2	ENSMUSG00000021348.4	Prl7d1	chr13	protein_coding	prolactin family 7, subfamily d, member 1
chr13	27900517	27900622	-	27898476	27900622	A3SS	0.33	50	50	ENSMUST00000021776.4	ENSMUSG00000021348.4	Prl7d1	chr13	protein_coding	prolactin family 7, subfamily d, member 1
chr13	28040606	28041484	+	28040606	28041478	A3SS	0.5	50	50	ENSMUST00000110335.10	ENSMUSG00000062551.14	Prl2c1	chr13	protein_coding	Prolactin family 2, subfamily c, member 1
chr13	28601861	28603248	-	28599129	28603248	A3SS	0.5	50	50	ENSMUST00000223198.2	ENSMUSG00000113216.2	Gm40841	chr13	lncRNA	predicted gene, 40841
chr13	28645044	28664748	-	28645044	28689689	A5SS	0.5	50	50	ENSMUST00000134787.8	ENSMUSG00000085936.8	2610307P16Rik	chr13	lncRNA	RIKEN cDNA 2610307P16 gene
chr13	28689896	28697653	-	28689896	28705053	A5SS	0.33	50	50	ENSMUST00000134787.8	ENSMUSG00000085936.8	2610307P16Rik	chr13	lncRNA	RIKEN cDNA 2610307P16 gene
chr13	28689896	28700730	-	28689896	28705053	A5SS	0.33	50	50	ENSMUST00000134787.8	ENSMUSG00000085936.8	2610307P16Rik	chr13	lncRNA	RIKEN cDNA 2610307P16 gene
chr13	28645044	28745424	-	28645044	28664748	5pMXE	0.33	50	50	ENSMUST00000122881.7	ENSMUSG00000085936.8	2610307P16Rik	chr13	lncRNA	RIKEN cDNA 2610307P16 gene
chr13	28852687	28956602	-	28852687;28853977	28853765;28956602	ES	0.33	50	50	ENSMUST00000148885.8	ENSMUSG00000085936.8	2610307P16Rik	chr13	lncRNA	RIKEN cDNA 2610307P16 gene
chr13	28852687;28895191	28895100;28956602	-	28852687;28853977	28853765;28956602	MXE	0.5	100	100	ENSMUST00000148885.8	ENSMUSG00000085936.8	2610307P16Rik	chr13	lncRNA	RIKEN cDNA 2610307P16 gene
chr13	28645044	28689689	-	28645044	28745424	A5SS	0.33	50	50	ENSMUST00000148885.8	ENSMUSG00000085936.8	2610307P16Rik	chr13	lncRNA	RIKEN cDNA 2610307P16 gene
chr13	28689896	28700730	-	28689896;28697721	28697653;28700730	ES	0.5	50	50	ENSMUST00000154298.2	ENSMUSG00000085936.8	2610307P16Rik	chr13	lncRNA	RIKEN cDNA 2610307P16 gene
chr13	28852687	28956602	-	28852687;28895191	28895100;28956602	ES	0.33	50	50	ENSMUST00000125358.8	ENSMUSG00000085936.8	2610307P16Rik	chr13	lncRNA	RIKEN cDNA 2610307P16 gene
chr13	29078327;29081420	29081350;29081863	-	29078327	29081863	cassetteExon	0.5	100	100	ENSMUST00000222648.2	ENSMUSG00000113352.2	Gm34639	chr13	lncRNA	predicted gene, 34639
chr13	29198517	29207159	+	29198517	29199268	3pMXE	0.5	50	50	ENSMUST00000146336.2	ENSMUSG00000086363.8	A330102I10Rik	chr13	lncRNA	RIKEN cDNA A330102I10 gene
chr13	29207195	29212405	+	29207195;29207706	29207614;29212405	ES	0.5	50	50	ENSMUST00000130109.8	ENSMUSG00000086363.8	A330102I10Rik	chr13	lncRNA	RIKEN cDNA A330102I10 gene
chr13	29200862	29207159	+	29198517	29207159	A5SS	0.5	50	50	ENSMUST00000130109.8	ENSMUSG00000086363.8	A330102I10Rik	chr13	lncRNA	RIKEN cDNA A330102I10 gene
chr13	29809707;29809937	29809861;29875582	-	29809707	29875582	cassetteExon	0.5	100	100	ENSMUST00000140278.8	ENSMUSG00000006191.18	Cdkal1	chr13	protein_coding	CDK5 regulatory subunit associated protein 1-like 1
chr13	29510211	29538613	-	29379238	29538613	A3SS	0.5	50	50	ENSMUST00000140278.8	ENSMUSG00000006191.18	Cdkal1	chr13	protein_coding	CDK5 regulatory subunit associated protein 1-like 1
chr13	29586842	29627991	-	29541566	29627991	A3SS	0.5	50	50	ENSMUST00000140278.8	ENSMUSG00000006191.18	Cdkal1	chr13	protein_coding	CDK5 regulatory subunit associated protein 1-like 1
chr13	29707234	29736212	-	29701541	29736212	A3SS	0.5	50	50	ENSMUST00000140278.8	ENSMUSG00000006191.18	Cdkal1	chr13	protein_coding	CDK5 regulatory subunit associated protein 1-like 1
chr13	29989185	30030211	-	29961284	30030211	A3SS	0.33	50	50	ENSMUST00000140278.8	ENSMUSG00000006191.18	Cdkal1	chr13	protein_coding	CDK5 regulatory subunit associated protein 1-like 1
chr13	30022685	30030211	-	29961284	30030211	A3SS	0.33	50	50	ENSMUST00000140278.8	ENSMUSG00000006191.18	Cdkal1	chr13	protein_coding	CDK5 regulatory subunit associated protein 1-like 1
chr13	30038924	30039318	-	30038924	30039546	A5SS	0.5	50	50	ENSMUST00000140278.8	ENSMUSG00000006191.18	Cdkal1	chr13	protein_coding	CDK5 regulatory subunit associated protein 1-like 1
chr13	30022685	30030211	-	29989185	30030211	A3SS	0.5	50	50	ENSMUST00000091674.12	ENSMUSG00000006191.18	Cdkal1	chr13	protein_coding	CDK5 regulatory subunit associated protein 1-like 1
chr13	30104208	30169283	-	30104208	30168111	5pMXE	0.33	50	50	ENSMUST00000221536.2	ENSMUSG00000016477.19	E2f3	chr13	protein_coding	E2F transcription factor 3
chr13	30104208;30163788	30163721;30168111	-	30104208	30168111	cassetteExon	0.5	100	100	ENSMUST00000221536.2	ENSMUSG00000016477.19	E2f3	chr13	protein_coding	E2F transcription factor 3
chr13	30102760	30104097	-	30102778	30104097	A3SS	0.5	50	50	ENSMUST00000221536.2	ENSMUSG00000016477.19	E2f3	chr13	protein_coding	E2F transcription factor 3
chr13	30104208	30163721	-	30104208	30169283	A5SS	0.33	50	50	ENSMUST00000102948.11	ENSMUSG00000016477.19	E2f3	chr13	protein_coding	E2F transcription factor 3
chr13	30320745	30378519	+	30320745	30347029	3pMXE	0.33	50	50	ENSMUST00000153269.3	ENSMUSG00000038732.16	Mboat1	chr13	protein_coding	membrane bound O-acyltransferase domain containing 1
chr13	30320745	30386308	+	30320745	30347029	3pMXE	0.33	50	50	ENSMUST00000153269.3	ENSMUSG00000038732.16	Mboat1	chr13	protein_coding	membrane bound O-acyltransferase domain containing 1
chr13	30320745	30378519	+	30320745	30386308	A3SS	0.33	50	50	ENSMUST00000152798.3	ENSMUSG00000038732.16	Mboat1	chr13	protein_coding	membrane bound O-acyltransferase domain containing 1
chr13	30379770	30386308	+	30320745	30386308	A5SS	0.5	50	50	ENSMUST00000152798.3	ENSMUSG00000038732.16	Mboat1	chr13	protein_coding	membrane bound O-acyltransferase domain containing 1
chr13	30351044	30378519	+	30320745	30378519	A5SS	0.5	50	50	ENSMUST00000047311.16	ENSMUSG00000038732.16	Mboat1	chr13	protein_coding	membrane bound O-acyltransferase domain containing 1
chr13	30529003	30549104	+	30529003	30529626	3pMXE	0.25	50	50	ENSMUST00000143181.8	ENSMUSG00000049115.16	Agtr1a	chr13	protein_coding	angiotensin II receptor, type 1a
chr13	30529003	30564885	+	30529003	30529626	3pMXE	0.25	50	50	ENSMUST00000143181.8	ENSMUSG00000049115.16	Agtr1a	chr13	protein_coding	angiotensin II receptor, type 1a
chr13	30529003	30564905	+	30529003	30529626	3pMXE	0.25	50	50	ENSMUST00000143181.8	ENSMUSG00000049115.16	Agtr1a	chr13	protein_coding	angiotensin II receptor, type 1a
chr13	30520572;30521674	30521573;30528920	+	30520572	30528920	cassetteExon	0.5	100	100	ENSMUST00000143181.8	ENSMUSG00000049115.16	Agtr1a	chr13	protein_coding	angiotensin II receptor, type 1a
chr13	30529003	30564885	+	30529003;30549218	30549104;30564885	ES	0.33	50	50	ENSMUST00000222503.2	ENSMUSG00000049115.16	Agtr1a	chr13	protein_coding	angiotensin II receptor, type 1a
chr13	30529003;30529754	30529626;30564885	+	30529003;30549218	30549104;30564885	MXE	0.5	100	100	ENSMUST00000222503.2	ENSMUSG00000049115.16	Agtr1a	chr13	protein_coding	angiotensin II receptor, type 1a
chr13	30529003	30564905	+	30529003	30549104	A3SS&ES	0.25	50	50	ENSMUST00000222503.2	ENSMUSG00000049115.16	Agtr1a	chr13	protein_coding	angiotensin II receptor, type 1a
chr13	30529003	30564885	+	30529003	30564905	A3SS	0.25	50	50	ENSMUST00000222370.2	ENSMUSG00000049115.16	Agtr1a	chr13	protein_coding	angiotensin II receptor, type 1a
chr13	30529003;30529754	30529626;30564885	+	30529003	30564885	cassetteExon	0.5	100	100	ENSMUST00000066412.8	ENSMUSG00000049115.16	Agtr1a	chr13	protein_coding	angiotensin II receptor, type 1a
chr13	30529003	30564885	+	30529754	30564885	5pMXE	0.33	50	50	ENSMUST00000221743.2	ENSMUSG00000049115.16	Agtr1a	chr13	protein_coding	angiotensin II receptor, type 1a
chr13	30549218	30564885	+	30529754	30564885	A5SS	0.33	50	50	ENSMUST00000221743.2	ENSMUSG00000049115.16	Agtr1a	chr13	protein_coding	angiotensin II receptor, type 1a
chr13	30856458	30889609	+	30856458;30880268	30880219;30889609	ES	0.5	50	50	ENSMUST00000091672.13	ENSMUSG00000069255.14	Dusp22	chr13	protein_coding	dual specificity phosphatase 22
chr13	30936762	30937431	+	30936762	30937428	A3SS	0.5	50	50	ENSMUST00000021784.10	ENSMUSG00000021356.11	Irf4	chr13	protein_coding	interferon regulatory factor 4
chr13	30933428	30934531	+	30933278	30934531	A5SS	0.5	50	50	ENSMUST00000021784.10	ENSMUSG00000021356.11	Irf4	chr13	protein_coding	interferon regulatory factor 4
chr13	31084886	31090486	-	31084886;31089738	31089636;31090486	ES	0.5	50	50	ENSMUST00000102946.8	ENSMUSG00000021357.15	Exoc2	chr13	protein_coding	exocyst complex component 2
chr13	31095233;31105641	31105370;31109706	-	31095233	31109706	cassetteExon	0.5	100	100	ENSMUST00000102946.8	ENSMUSG00000021357.15	Exoc2	chr13	protein_coding	exocyst complex component 2
chr13	31108623	31109706	-	31095233	31109706	A3SS	0.33	50	50	ENSMUST00000102946.8	ENSMUSG00000021357.15	Exoc2	chr13	protein_coding	exocyst complex component 2
chr13	31124753	31130348	-	31124753	31157979	A5SS	0.5	50	50	ENSMUST00000021785.8	ENSMUSG00000021357.15	Exoc2	chr13	protein_coding	exocyst complex component 2
chr13	31108623	31109706	-	31105641	31109706	A3SS	0.33	50	50	ENSMUST00000220490.2	ENSMUSG00000021357.15	Exoc2	chr13	protein_coding	exocyst complex component 2
chr13	31545209	31550203	-	31534131	31550203	A3SS	0.5	50	50	ENSMUST00000148552.2	ENSMUSG00000085620.3	G630018N14Rik	chr13	lncRNA	RIKEN cDNA G630018N14 gene
chr13	31590958;31591570	31591338;31592761	-	31590958	31592761	cassetteExon	0.5	100	100	ENSMUST00000221171.2	ENSMUSG00000085620.3	G630018N14Rik	chr13	lncRNA	RIKEN cDNA G630018N14 gene
chr13	31764136	31770440	-	31764136	31766447	5pMXE	0.33	50	50	ENSMUST00000150418.8	ENSMUSG00000038408.15	1700018A04Rik	chr13	lncRNA	RIKEN cDNA 1700018A04 gene
chr13	31751596	31763553	-	31751593	31763553	A3SS	0.5	50	50	ENSMUST00000150418.8	ENSMUSG00000038408.15	1700018A04Rik	chr13	lncRNA	RIKEN cDNA 1700018A04 gene
chr13	31763520	31763926	-	31763641	31763926	A3SS&ES	0.5	50	50	ENSMUST00000150418.8	ENSMUSG00000038408.15	1700018A04Rik	chr13	lncRNA	RIKEN cDNA 1700018A04 gene
chr13	31764136	31766420	-	31764136	31766447	A5SS	0.33	50	50	ENSMUST00000150418.8	ENSMUSG00000038408.15	1700018A04Rik	chr13	lncRNA	RIKEN cDNA 1700018A04 gene
chr13	31764136	31770440	-	31764136	31766420	5pMXE	0.33	50	50	ENSMUST00000126138.8	ENSMUSG00000038408.15	1700018A04Rik	chr13	lncRNA	RIKEN cDNA 1700018A04 gene
chr13	31799493	31809094	-	31776709	31809094	A3SS	0.5	50	50	ENSMUST00000221561.2	ENSMUSG00000038408.15	1700018A04Rik	chr13	lncRNA	RIKEN cDNA 1700018A04 gene
chr13	32341820	32409118	-	32312082	32409118	A3SS	0.5	50	50	ENSMUST00000041859.9	ENSMUSG00000038372.15	Gmds	chr13	protein_coding	GDP-mannose 4, 6-dehydratase
chr13	32411285	32418343	-	32411285	32418336	A5SS	0.5	50	50	ENSMUST00000041859.9	ENSMUSG00000038372.15	Gmds	chr13	protein_coding	GDP-mannose 4, 6-dehydratase
chr13	32912738	32913059	-	32908867	32913059	A3SS	0.5	50	50	ENSMUST00000057428.13	ENSMUSG00000044951.18	Mylk4	chr13	protein_coding	myosin light chain kinase family, member 4
chr13	32950758	32965541	-	32913137	32965541	A3SS	0.5	50	50	ENSMUST00000057428.13	ENSMUSG00000044951.18	Mylk4	chr13	protein_coding	myosin light chain kinase family, member 4
chr13	32908867	32910826	-	32908867	32913059	A5SS	0.5	50	50	ENSMUST00000057428.13	ENSMUSG00000044951.18	Mylk4	chr13	protein_coding	myosin light chain kinase family, member 4
chr13	32913137	32960144	-	32913137	32965541	A5SS	0.5	50	50	ENSMUST00000057428.13	ENSMUSG00000044951.18	Mylk4	chr13	protein_coding	myosin light chain kinase family, member 4
chr13	32990983;32998413	32998151;33000236	+	32990983	33000236	cassetteExon	0.5	100	100	ENSMUST00000021832.7	ENSMUSG00000021400.9	Wrnip1	chr13	protein_coding	Werner helicase interacting protein 1
chr13	32991181	33000236	+	32990983	33000236	A5SS	0.33	50	50	ENSMUST00000021832.7	ENSMUSG00000021400.9	Wrnip1	chr13	protein_coding	Werner helicase interacting protein 1
chr13	32991181	33000236	+	32998413	33000236	A5SS&ES	0.33	50	50	ENSMUST00000229351.2	ENSMUSG00000021400.9	Wrnip1	chr13	protein_coding	Werner helicase interacting protein 1
chr13	33028331	33029292	-	33027205	33029292	A3SS	0.5	50	50	ENSMUST00000076352.8	ENSMUSG00000044734.17	Serpinb1a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 1a
chr13	33034397	33034965	-	33034397	33035125	A5SS	0.5	50	50	ENSMUST00000076352.8	ENSMUSG00000044734.17	Serpinb1a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 1a
chr13	33072992	33082097	-	33072992;33081089	33080914;33082097	ES	0.5	50	50	ENSMUST00000021834.11	ENSMUSG00000079049.10	Serpinb1c	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 1c
chr13	33067963	33070137	-	33068346	33070137	A3SS&ES	0.5	50	50	ENSMUST00000021834.11	ENSMUSG00000079049.10	Serpinb1c	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 1c
chr13	33149526	33155454	+	33149526;33152657	33152483;33155454	ES	0.5	50	50	ENSMUST00000110293.9	ENSMUSG00000042842.12	Serpinb6b	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6b
chr13	33159029	33161508	+	33159022	33161508	A5SS	0.5	50	50	ENSMUST00000110293.9	ENSMUSG00000042842.12	Serpinb6b	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6b
chr13	33217627;33218553	33218457;33219499	+	33217627	33219499	cassetteExon	0.5	100	100	ENSMUST00000006392.3	ENSMUSG00000021403.4	Serpinb9b	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 9b
chr13	33341868	33342294	-	33341868	33343668	A5SS	0.33	50	50	ENSMUST00000021837.10	ENSMUSG00000021404.13	Serpinb9c	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 9c
chr13	33341868	33342421	-	33341868	33343668	A5SS	0.33	50	50	ENSMUST00000021837.10	ENSMUSG00000021404.13	Serpinb9c	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 9c
chr13	33341868	33342421	-	33341868	33342294	5pMXE	0.33	50	50	ENSMUST00000110284.8	ENSMUSG00000021404.13	Serpinb9c	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 9c
chr13	33845518	33848028	+	33845603	33848028	A5SS	0.5	50	50	ENSMUST00000059637.8	ENSMUSG00000047889.10	Serpinb6d	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6d
chr13	34025338	34027364	-	34025338;34026702	34026690;34027364	ES	0.5	50	50	ENSMUST00000110275.8	ENSMUSG00000069248.12	Serpinb6e	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6e
chr13	34083419	34089626	-	34083419	34089091	5pMXE	0.5	50	50	ENSMUST00000110273.9	ENSMUSG00000052180.16	Serpinb6c	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6c
chr13	34115629	34119905	-	34115629;34119777	34119556;34119905	ES	0.5	50	50	ENSMUST00000167163.8	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34102879	34105841	-	34102879	34106909	A5SS	0.5	50	50	ENSMUST00000167163.8	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34119552	-	34115629	34119556	A5SS	0.16	50	50	ENSMUST00000167163.8	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34119602	-	34115629	34119556	A5SS	0.16	50	50	ENSMUST00000167163.8	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34119610	-	34115629	34119556	A5SS	0.16	50	50	ENSMUST00000167163.8	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34119750	-	34115629	34119556	A5SS	0.16	50	50	ENSMUST00000167163.8	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34138881	-	34115629	34119905	5pMXE	0.11	50	50	ENSMUST00000043552.17	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34180226	-	34115629	34119905	5pMXE	0.11	50	50	ENSMUST00000043552.17	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34186449	-	34115629	34119905	5pMXE	0.11	50	50	ENSMUST00000043552.17	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629;34119777	34119552;34119905	-	34115629	34119905	cassetteExon	0.5	100	100	ENSMUST00000043552.17	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629;34119777	34119602;34119905	-	34115629	34119905	cassetteExon	0.5	100	100	ENSMUST00000043552.17	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629;34119777	34119610;34119905	-	34115629	34119905	cassetteExon	0.5	100	100	ENSMUST00000043552.17	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629;34119777	34119750;34119905	-	34115629	34119905	cassetteExon	0.5	100	100	ENSMUST00000043552.17	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629;34139093	34138881;34180226	-	34115629	34180226	cassetteExon	0.5	100	100	ENSMUST00000076532.14	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34155315	34180226	-	34115629	34180226	A3SS	0.25	50	50	ENSMUST00000076532.14	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34171232	34180226	-	34115629	34180226	A3SS	0.25	50	50	ENSMUST00000076532.14	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34119552	-	34115629	34180226	A5SS	0.11	50	50	ENSMUST00000076532.14	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34119556	-	34115629	34180226	A5SS	0.11	50	50	ENSMUST00000076532.14	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34119602	-	34115629	34180226	A5SS	0.11	50	50	ENSMUST00000076532.14	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34119610	-	34115629	34180226	A5SS	0.11	50	50	ENSMUST00000076532.14	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34119750	-	34115629	34180226	A5SS	0.11	50	50	ENSMUST00000076532.14	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34186449	-	34115629	34180226	A5SS&ES	0.11	50	50	ENSMUST00000076532.14	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34180334	34186449	-	34180334	34186653	A5SS	0.5	50	50	ENSMUST00000076532.14	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34119552	-	34115629	34119610	A5SS	0.16	50	50	ENSMUST00000017188.14	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34119602	-	34115629	34119610	A5SS	0.16	50	50	ENSMUST00000017188.14	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34119750	-	34115629	34119610	A5SS	0.16	50	50	ENSMUST00000017188.14	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34119905	-	34115629	34119556	5pMXE	0.11	50	50	ENSMUST00000167260.8	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34138881	-	34115629	34119556	5pMXE	0.11	50	50	ENSMUST00000167260.8	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34186449	-	34115629	34119556	5pMXE	0.11	50	50	ENSMUST00000167260.8	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34119602	-	34115629	34119552	A5SS	0.16	50	50	ENSMUST00000171252.8	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34119750	-	34115629	34119552	A5SS	0.16	50	50	ENSMUST00000171252.8	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34119905	-	34115629	34119750	5pMXE	0.11	50	50	ENSMUST00000168350.8	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34138881	-	34115629	34119750	5pMXE	0.11	50	50	ENSMUST00000168350.8	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34186449	-	34115629	34119750	5pMXE	0.11	50	50	ENSMUST00000168350.8	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34119602	-	34115629	34119750	A5SS	0.11	50	50	ENSMUST00000168350.8	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34186449	-	34115629;34180334	34180226;34186449	ES	0.5	50	50	ENSMUST00000168400.8	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34119552	-	34115629	34186449	A5SS	0.11	50	50	ENSMUST00000166354.2	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34119602	-	34115629	34186449	A5SS	0.11	50	50	ENSMUST00000166354.2	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34119610	-	34115629	34186449	A5SS	0.11	50	50	ENSMUST00000166354.2	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34138881	-	34115629	34186449	A5SS	0.11	50	50	ENSMUST00000166354.2	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34155315	34180226	-	34139093	34180226	A3SS	0.25	50	50	ENSMUST00000167237.8	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34171232	34180226	-	34139093	34180226	A3SS	0.25	50	50	ENSMUST00000167237.8	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34119552	-	34115629	34138881	A5SS	0.11	50	50	ENSMUST00000167237.8	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34119602	-	34115629	34138881	A5SS	0.11	50	50	ENSMUST00000167237.8	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34115629	34119610	-	34115629	34138881	A5SS	0.11	50	50	ENSMUST00000167237.8	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34171232	34180226	-	34155315	34180226	A3SS	0.25	50	50	ENSMUST00000167597.8	ENSMUSG00000060147.16	Serpinb6a	chr13	protein_coding	serine (or cysteine) peptidase inhibitor, clade B, member 6a
chr13	34120080	34137300	+	34120080	34120495	3pMXE	0.5	50	50	ENSMUST00000147622.3	ENSMUSG00000085457.4	1110046J04Rik	chr13	lncRNA	RIKEN cDNA 1110046J04 gene
chr13	34148783;34152260	34152173;34156295	+	34148783	34156295	cassetteExon	0.5	100	100	ENSMUST00000220844.2	ENSMUSG00000046949.17	Nqo2	chr13	protein_coding	N-ribosyldihydronicotinamide quinone reductase 2
chr13	34148783	34150028	+	34148783	34156295	A3SS	0.33	50	50	ENSMUST00000220844.2	ENSMUSG00000046949.17	Nqo2	chr13	protein_coding	N-ribosyldihydronicotinamide quinone reductase 2
chr13	34148783;34150109	34150028;34152173	+	34148783	34152173	cassetteExon	0.5	100	100	ENSMUST00000058978.9	ENSMUSG00000046949.17	Nqo2	chr13	protein_coding	N-ribosyldihydronicotinamide quinone reductase 2
chr13	34151206	34152173	+	34148783	34152173	A5SS	0.33	50	50	ENSMUST00000058978.9	ENSMUSG00000046949.17	Nqo2	chr13	protein_coding	N-ribosyldihydronicotinamide quinone reductase 2
chr13	34149035	34150028	+	34148783	34150028	A5SS	0.5	50	50	ENSMUST00000021843.13	ENSMUSG00000046949.17	Nqo2	chr13	protein_coding	N-ribosyldihydronicotinamide quinone reductase 2
chr13	34151206	34152173	+	34150109	34152173	A5SS	0.33	50	50	ENSMUST00000021843.13	ENSMUSG00000046949.17	Nqo2	chr13	protein_coding	N-ribosyldihydronicotinamide quinone reductase 2
chr13	34194684	34199109	+	34194684;34197370	34197233;34199109	ES	0.5	50	50	ENSMUST00000021844.15	ENSMUSG00000021408.16	Ripk1	chr13	protein_coding	receptor (TNFRSF)-interacting serine-threonine kinase 1
chr13	34186936	34193584	+	34186689	34193584	A5SS	0.5	50	50	ENSMUST00000021844.15	ENSMUSG00000021408.16	Ripk1	chr13	protein_coding	receptor (TNFRSF)-interacting serine-threonine kinase 1
chr13	34194684	34199109	+	34194684	34197233	3pMXE	0.5	50	50	ENSMUST00000163418.2	ENSMUSG00000021408.16	Ripk1	chr13	protein_coding	receptor (TNFRSF)-interacting serine-threonine kinase 1
chr13	34228510	34234264	+	34228510;34230935	34230769;34234264	ES	0.33	50	50	ENSMUST00000040656.8	ENSMUSG00000038286.12	Bphl	chr13	protein_coding	biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen)
chr13	34244548	34257659	+	34244548;34248016	34247893;34257659	ES	0.5	50	50	ENSMUST00000040656.8	ENSMUSG00000038286.12	Bphl	chr13	protein_coding	biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen)
chr13	34221720	34230769	+	34228510	34230769	A5SS&ES	0.5	50	50	ENSMUST00000040656.8	ENSMUSG00000038286.12	Bphl	chr13	protein_coding	biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen)
chr13	34221861	34228407	+	34221752	34228407	A5SS	0.5	50	50	ENSMUST00000040656.8	ENSMUSG00000038286.12	Bphl	chr13	protein_coding	biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen)
chr13	34233449	34234264	+	34230935	34234264	A5SS	0.33	50	50	ENSMUST00000040656.8	ENSMUSG00000038286.12	Bphl	chr13	protein_coding	biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen)
chr13	34244548	34257659	+	34244548	34247893	3pMXE	0.5	50	50	ENSMUST00000222658.2	ENSMUSG00000038286.12	Bphl	chr13	protein_coding	biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen)
chr13	34233449	34234264	+	34228510	34234264	A5SS	0.33	50	50	ENSMUST00000222658.2	ENSMUSG00000038286.12	Bphl	chr13	protein_coding	biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen)
chr13	34228510	34234264	+	34230935	34234264	A5SS&ES	0.33	50	50	ENSMUST00000222691.2	ENSMUSG00000038286.12	Bphl	chr13	protein_coding	biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen)
chr13	34313337	34314311	-	34313337	34314160	A5SS	0.5	50	50	ENSMUST00000075774.5	ENSMUSG00000045136.7	Tubb2b	chr13	protein_coding	tubulin, beta 2B class IIB
chr13	34347232;34350119	34350044;34361964	+	34347232	34361964	cassetteExon	0.5	100	100	ENSMUST00000124996.8	ENSMUSG00000071451.11	Psmg4	chr13	protein_coding	proteasome (prosome, macropain) assembly chaperone 4
chr13	34483134	34528142	-	34483134;34489244	34489141;34528142	ES	0.5	50	50	ENSMUST00000148390.3	ENSMUSG00000038267.16	Slc22a23	chr13	protein_coding	solute carrier family 22, member 23
chr13	34376262;34377255	34377232;34377377	-	34376262	34377377	cassetteExon	0.5	100	100	ENSMUST00000148390.3	ENSMUSG00000038267.16	Slc22a23	chr13	protein_coding	solute carrier family 22, member 23
chr13	34405382	34405886	-	34388027	34405886	A3SS	0.5	50	50	ENSMUST00000148390.3	ENSMUSG00000038267.16	Slc22a23	chr13	protein_coding	solute carrier family 22, member 23
chr13	34690126	34690347	-	34690122	34690347	A3SS	0.5	50	50	ENSMUST00000221677.2	ENSMUSG00000113998.2	Gm40909	chr13	lncRNA	predicted gene, 40909
chr13	34814445;34821290	34821137;34822148	-	34814445	34822148	cassetteExon	0.5	100	100	ENSMUST00000053459.15	ENSMUSG00000021411.17	Pxdc1	chr13	protein_coding	PX domain containing 1
chr13	34822265	34822995	-	34822265	34822990	A5SS	0.5	50	50	ENSMUST00000053459.15	ENSMUSG00000021411.17	Pxdc1	chr13	protein_coding	PX domain containing 1
chr13	34823081	34832476	-	34823081	34836163	A5SS	0.5	50	50	ENSMUST00000053459.15	ENSMUSG00000021411.17	Pxdc1	chr13	protein_coding	PX domain containing 1
chr13	34923770	34930437	+	34918891	34930437	A5SS	0.5	50	50	ENSMUST00000039605.8	ENSMUSG00000038246.8	Fam50b	chr13	protein_coding	family with sequence similarity 50, member B
chr13	35076146;35077405	35077300;35077744	+	35076146	35077744	cassetteExon	0.5	100	100	ENSMUST00000077853.5	ENSMUSG00000021413.10	Prpf4b	chr13	protein_coding	pre-mRNA processing factor 4B
chr13	35083206;35083438	35083298;35083814	+	35083206	35083814	cassetteExon	0.5	100	100	ENSMUST00000077853.5	ENSMUSG00000021413.10	Prpf4b	chr13	protein_coding	pre-mRNA processing factor 4B
chr13	35087256;35087585	35087513;35088027	+	35087256	35088027	cassetteExon	0.5	100	100	ENSMUST00000220965.2	ENSMUSG00000021413.10	Prpf4b	chr13	protein_coding	pre-mRNA processing factor 4B
chr13	35087256	35088027	+	35087256	35087513	3pMXE	0.5	50	50	ENSMUST00000221087.2	ENSMUSG00000021413.10	Prpf4b	chr13	protein_coding	pre-mRNA processing factor 4B
chr13	35095176	35097412	-	35095452	35097412	A3SS	0.5	50	50	ENSMUST00000021851.8	ENSMUSG00000021414.9	Fam217a	chr13	protein_coding	family with sequence similarity 217, member A
chr13	35097482	35097593	-	35097479	35097593	A3SS	0.5	50	50	ENSMUST00000021851.8	ENSMUSG00000021414.9	Fam217a	chr13	protein_coding	family with sequence similarity 217, member A
chr13	35144482;35144777	35144707;35147737	-	35144482	35147737	cassetteExon	0.5	100	100	ENSMUST00000021853.12	ENSMUSG00000021416.12	Eci3	chr13	protein_coding	enoyl-Coenzyme A delta isomerase 3
chr13	35148819	35167116	+	35148819;35151317	35151210;35167116	ES	0.5	50	50	ENSMUST00000130003.8	ENSMUSG00000085962.9	Gm16984	chr13	lncRNA	predicted gene, 16984
chr13	35167190;35168718	35168683;35173952	+	35167190	35173952	cassetteExon	0.5	100	100	ENSMUST00000130003.8	ENSMUSG00000085962.9	Gm16984	chr13	lncRNA	predicted gene, 16984
chr13	35148719	35151210	+	35148819	35151210	A5SS	0.5	50	50	ENSMUST00000130003.8	ENSMUSG00000085962.9	Gm16984	chr13	lncRNA	predicted gene, 16984
chr13	35148819	35167116	+	35151317	35167116	A5SS&ES	0.5	50	50	ENSMUST00000170747.8	ENSMUSG00000085962.9	Gm16984	chr13	lncRNA	predicted gene, 16984
chr13	35177213	35210992	-	35177213	35177997	5pMXE	0.33	50	50	ENSMUST00000171229.8	ENSMUSG00000021417.16	Eci2	chr13	protein_coding	enoyl-Coenzyme A delta isomerase 2
chr13	35177203	35177997	-	35177213	35177997	A3SS	0.33	50	50	ENSMUST00000171229.8	ENSMUSG00000021417.16	Eci2	chr13	protein_coding	enoyl-Coenzyme A delta isomerase 2
chr13	35177311	35177997	-	35177213	35177997	A3SS	0.33	50	50	ENSMUST00000171229.8	ENSMUSG00000021417.16	Eci2	chr13	protein_coding	enoyl-Coenzyme A delta isomerase 2
chr13	35172335	35173513	-	35172335	35174164	A5SS	0.5	50	50	ENSMUST00000171229.8	ENSMUSG00000021417.16	Eci2	chr13	protein_coding	enoyl-Coenzyme A delta isomerase 2
chr13	35177213	35177813	-	35177213	35177997	A5SS	0.33	50	50	ENSMUST00000171229.8	ENSMUSG00000021417.16	Eci2	chr13	protein_coding	enoyl-Coenzyme A delta isomerase 2
chr13	35177213	35210992	-	35177213	35177813	5pMXE	0.33	50	50	ENSMUST00000021854.14	ENSMUSG00000021417.16	Eci2	chr13	protein_coding	enoyl-Coenzyme A delta isomerase 2
chr13	35177203	35177813	-	35177213	35177813	A3SS	0.33	50	50	ENSMUST00000021854.14	ENSMUSG00000021417.16	Eci2	chr13	protein_coding	enoyl-Coenzyme A delta isomerase 2
chr13	35177311	35177813	-	35177213	35177813	A3SS	0.33	50	50	ENSMUST00000021854.14	ENSMUSG00000021417.16	Eci2	chr13	protein_coding	enoyl-Coenzyme A delta isomerase 2
chr13	35177203	35210992	-	35177203	35177997	5pMXE	0.33	50	50	ENSMUST00000178421.8	ENSMUSG00000021417.16	Eci2	chr13	protein_coding	enoyl-Coenzyme A delta isomerase 2
chr13	35177311	35177997	-	35177203	35177997	A3SS	0.33	50	50	ENSMUST00000178421.8	ENSMUSG00000021417.16	Eci2	chr13	protein_coding	enoyl-Coenzyme A delta isomerase 2
chr13	35177203	35177813	-	35177203	35177997	A5SS	0.33	50	50	ENSMUST00000178421.8	ENSMUSG00000021417.16	Eci2	chr13	protein_coding	enoyl-Coenzyme A delta isomerase 2
chr13	35177203	35210992	-	35177213	35210992	A3SS	0.33	50	50	ENSMUST00000170538.8	ENSMUSG00000021417.16	Eci2	chr13	protein_coding	enoyl-Coenzyme A delta isomerase 2
chr13	35191982	35210992	-	35177213	35210992	A3SS	0.33	50	50	ENSMUST00000170538.8	ENSMUSG00000021417.16	Eci2	chr13	protein_coding	enoyl-Coenzyme A delta isomerase 2
chr13	35191982	35210992	-	35177203	35210992	A3SS	0.33	50	50	ENSMUST00000163280.8	ENSMUSG00000021417.16	Eci2	chr13	protein_coding	enoyl-Coenzyme A delta isomerase 2
chr13	35177203	35177813	-	35177203	35210992	A5SS	0.33	50	50	ENSMUST00000163280.8	ENSMUSG00000021417.16	Eci2	chr13	protein_coding	enoyl-Coenzyme A delta isomerase 2
chr13	35177311	35177813	-	35177203	35177813	A3SS	0.33	50	50	ENSMUST00000170989.8	ENSMUSG00000021417.16	Eci2	chr13	protein_coding	enoyl-Coenzyme A delta isomerase 2
chr13	35177311	35177813	-	35177311	35177997	A5SS	0.5	50	50	ENSMUST00000167036.8	ENSMUSG00000021417.16	Eci2	chr13	protein_coding	enoyl-Coenzyme A delta isomerase 2
chr13	35265280	35267084	+	35265280	35265521	3pMXE	0.5	50	50	ENSMUST00000221012.2	ENSMUSG00000113738.2	Gm40910	chr13	lncRNA	predicted gene, 40910
chr13	35262610	35263215	+	35236786	35263215	A5SS	0.5	50	50	ENSMUST00000221012.2	ENSMUSG00000113738.2	Gm40910	chr13	lncRNA	predicted gene, 40910
chr13	35351429	35353495	-	35351429	35351725	5pMXE	0.5	50	50	ENSMUST00000222642.2	ENSMUSG00000113906.2	4930529N20Rik	chr13	lncRNA	RIKEN cDNA 4930529N20 gene
chr13	35368805;35369382	35369285;35371518	+	35368805	35371518	cassetteExon	0.5	100	100	ENSMUST00000221760.2	ENSMUSG00000102099.3	1700011B04Rik	chr13	lncRNA	RIKEN cDNA 1700011B04 gene
chr13	35368805	35371578	+	35368805	35371518	A3SS	0.33	50	50	ENSMUST00000221760.2	ENSMUSG00000102099.3	1700011B04Rik	chr13	lncRNA	RIKEN cDNA 1700011B04 gene
chr13	35352006	35364303	+	35351961	35364303	A5SS	0.33	50	50	ENSMUST00000221760.2	ENSMUSG00000102099.3	1700011B04Rik	chr13	lncRNA	RIKEN cDNA 1700011B04 gene
chr13	35354553	35364303	+	35351961	35364303	A5SS	0.33	50	50	ENSMUST00000221760.2	ENSMUSG00000102099.3	1700011B04Rik	chr13	lncRNA	RIKEN cDNA 1700011B04 gene
chr13	35365678	35368711	+	35364451	35368711	A5SS	0.33	50	50	ENSMUST00000221760.2	ENSMUSG00000102099.3	1700011B04Rik	chr13	lncRNA	RIKEN cDNA 1700011B04 gene
chr13	35366900	35368711	+	35364451	35368711	A5SS	0.33	50	50	ENSMUST00000221760.2	ENSMUSG00000102099.3	1700011B04Rik	chr13	lncRNA	RIKEN cDNA 1700011B04 gene
chr13	35370363	35371518	+	35368805	35371518	A5SS	0.33	50	50	ENSMUST00000221760.2	ENSMUSG00000102099.3	1700011B04Rik	chr13	lncRNA	RIKEN cDNA 1700011B04 gene
chr13	35354553	35364303	+	35352006	35364303	A5SS	0.33	50	50	ENSMUST00000221013.2	ENSMUSG00000102099.3	1700011B04Rik	chr13	lncRNA	RIKEN cDNA 1700011B04 gene
chr13	35368805	35369285	+	35368805	35371578	A3SS	0.33	50	50	ENSMUST00000223526.2	ENSMUSG00000102099.3	1700011B04Rik	chr13	lncRNA	RIKEN cDNA 1700011B04 gene
chr13	35365678;35366900	35366815;35368711	+	35365678	35368711	cassetteExon	0.5	100	100	ENSMUST00000222668.2	ENSMUSG00000102099.3	1700011B04Rik	chr13	lncRNA	RIKEN cDNA 1700011B04 gene
chr13	35365678	35368692	+	35365678	35368711	A3SS	0.33	50	50	ENSMUST00000222668.2	ENSMUSG00000102099.3	1700011B04Rik	chr13	lncRNA	RIKEN cDNA 1700011B04 gene
chr13	35370363	35371518	+	35369382	35371518	A5SS	0.33	50	50	ENSMUST00000222668.2	ENSMUSG00000102099.3	1700011B04Rik	chr13	lncRNA	RIKEN cDNA 1700011B04 gene
chr13	35365678	35366815	+	35365678	35368692	A3SS	0.33	50	50	ENSMUST00000221256.2	ENSMUSG00000102099.3	1700011B04Rik	chr13	lncRNA	RIKEN cDNA 1700011B04 gene
chr13	35373671	35382359	-	35375821	35382359	A3SS&ES	0.5	50	50	ENSMUST00000221688.2	ENSMUSG00000113770.2	1700019C18Rik	chr13	lncRNA	RIKEN cDNA 1700019C18 gene
chr13	35797005	35798832	-	35787214	35798832	A3SS	0.5	50	50	ENSMUST00000224356.2	ENSMUSG00000114661.2	Gm48707	chr13	lncRNA	predicted gene, 48707
chr13	35798985	35800572	-	35799030	35800572	A3SS	0.5	50	50	ENSMUST00000224539.2	ENSMUSG00000114661.2	Gm48707	chr13	lncRNA	predicted gene, 48707
chr13	35974158;35976995	35976761;35999892	+	35974158	35999892	cassetteExon	0.5	100	100	ENSMUST00000075220.14	ENSMUSG00000059288.15	Cdyl	chr13	protein_coding	chromodomain protein, Y chromosome-like
chr13	35925871	35999892	+	35974158	35999892	A5SS&ES	0.33	50	50	ENSMUST00000075220.14	ENSMUSG00000059288.15	Cdyl	chr13	protein_coding	chromodomain protein, Y chromosome-like
chr13	35946905	35974084	+	35867821	35974084	A5SS	0.5	50	50	ENSMUST00000075220.14	ENSMUSG00000059288.15	Cdyl	chr13	protein_coding	chromodomain protein, Y chromosome-like
chr13	35925871	35999892	+	35976995	35999892	A5SS&ES	0.33	50	50	ENSMUST00000225602.2	ENSMUSG00000059288.15	Cdyl	chr13	protein_coding	chromodomain protein, Y chromosome-like
chr13	36080908	36082798	-	36080908;36082682	36082548;36082798	ES	0.5	50	50	ENSMUST00000171686.9	ENSMUSG00000021418.16	Rpp40	chr13	protein_coding	ribonuclease P 40 subunit
chr13	36086091	36088402	-	36086091;36087739	36087671;36088402	ES	0.5	50	50	ENSMUST00000171686.9	ENSMUSG00000021418.16	Rpp40	chr13	protein_coding	ribonuclease P 40 subunit
chr13	36086091	36088402	-	36087739	36088402	A3SS	0.5	50	50	ENSMUST00000174852.2	ENSMUSG00000021418.16	Rpp40	chr13	protein_coding	ribonuclease P 40 subunit
chr13	36151965	36152141	+	36142979	36152141	A5SS	0.5	50	50	ENSMUST00000225537.2	ENSMUSG00000050423.12	Ppp1r3g	chr13	protein_coding	protein phosphatase 1, regulatory subunit 3G
chr13	36301988	36416105	+	36301988;36389124	36388492;36416105	ES	0.5	50	50	ENSMUST00000021857.13	ENSMUSG00000021420.14	Fars2	chr13	protein_coding	phenylalanine-tRNA synthetase 2 (mitochondrial)
chr13	36594213	36905900	+	36594213	36721275	3pMXE	0.33	50	50	ENSMUST00000021857.13	ENSMUSG00000021420.14	Fars2	chr13	protein_coding	phenylalanine-tRNA synthetase 2 (mitochondrial)
chr13	36301988;36332427	36332344;36388492	+	36301988	36388492	cassetteExon	0.5	100	100	ENSMUST00000021857.13	ENSMUSG00000021420.14	Fars2	chr13	protein_coding	phenylalanine-tRNA synthetase 2 (mitochondrial)
chr13	36430477	36486823	+	36430477	36525920	A3SS	0.5	50	50	ENSMUST00000021857.13	ENSMUSG00000021420.14	Fars2	chr13	protein_coding	phenylalanine-tRNA synthetase 2 (mitochondrial)
chr13	36594213	36597456	+	36594213	36721275	A3SS	0.33	50	50	ENSMUST00000021857.13	ENSMUSG00000021420.14	Fars2	chr13	protein_coding	phenylalanine-tRNA synthetase 2 (mitochondrial)
chr13	36301776	36388492	+	36301988	36388492	A5SS	0.25	50	50	ENSMUST00000021857.13	ENSMUSG00000021420.14	Fars2	chr13	protein_coding	phenylalanine-tRNA synthetase 2 (mitochondrial)
chr13	36314016	36388492	+	36301988	36388492	A5SS	0.25	50	50	ENSMUST00000021857.13	ENSMUSG00000021420.14	Fars2	chr13	protein_coding	phenylalanine-tRNA synthetase 2 (mitochondrial)
chr13	36510995	36525920	+	36430477	36525920	A5SS	0.5	50	50	ENSMUST00000021857.13	ENSMUSG00000021420.14	Fars2	chr13	protein_coding	phenylalanine-tRNA synthetase 2 (mitochondrial)
chr13	36530740	36594062	+	36526080	36594062	A5SS	0.5	50	50	ENSMUST00000021857.13	ENSMUSG00000021420.14	Fars2	chr13	protein_coding	phenylalanine-tRNA synthetase 2 (mitochondrial)
chr13	36314016	36388492	+	36301776	36388492	A5SS	0.25	50	50	ENSMUST00000223796.2	ENSMUSG00000021420.14	Fars2	chr13	protein_coding	phenylalanine-tRNA synthetase 2 (mitochondrial)
chr13	36332427	36388492	+	36301776	36388492	A5SS	0.25	50	50	ENSMUST00000223796.2	ENSMUSG00000021420.14	Fars2	chr13	protein_coding	phenylalanine-tRNA synthetase 2 (mitochondrial)
chr13	36301988	36332344	+	36301988	36416105	A3SS	0.33	50	50	ENSMUST00000099582.4	ENSMUSG00000021420.14	Fars2	chr13	protein_coding	phenylalanine-tRNA synthetase 2 (mitochondrial)
chr13	36301988	36388492	+	36301988	36416105	A3SS	0.33	50	50	ENSMUST00000099582.4	ENSMUSG00000021420.14	Fars2	chr13	protein_coding	phenylalanine-tRNA synthetase 2 (mitochondrial)
chr13	36389124	36416105	+	36301988	36416105	A5SS	0.5	50	50	ENSMUST00000099582.4	ENSMUSG00000021420.14	Fars2	chr13	protein_coding	phenylalanine-tRNA synthetase 2 (mitochondrial)
chr13	36314016	36388492	+	36332427	36388492	A5SS&ES	0.33	50	50	ENSMUST00000224611.2	ENSMUSG00000021420.14	Fars2	chr13	protein_coding	phenylalanine-tRNA synthetase 2 (mitochondrial)
chr13	36594213	36597456	+	36594213	36905900	A3SS	0.33	50	50	ENSMUST00000224916.2	ENSMUSG00000021420.14	Fars2	chr13	protein_coding	phenylalanine-tRNA synthetase 2 (mitochondrial)
chr13	36797396	36816312	+	36797396	36799281	3pMXE	0.5	50	50	ENSMUST00000225239.2	ENSMUSG00000114851.2	Gm46409	chr13	lncRNA	predicted gene, 46409
chr13	36914225	36915618	-	36914225	36914517	5pMXE	0.25	50	50	ENSMUST00000224323.2	ENSMUSG00000039114.17	Nrn1	chr13	protein_coding	neuritin 1
chr13	36914225	36918210	-	36914225	36914517	5pMXE	0.25	50	50	ENSMUST00000224323.2	ENSMUSG00000039114.17	Nrn1	chr13	protein_coding	neuritin 1
chr13	36914225	36914496	-	36914225	36914517	A5SS	0.25	50	50	ENSMUST00000224323.2	ENSMUSG00000039114.17	Nrn1	chr13	protein_coding	neuritin 1
chr13	36914225	36914496	-	36914225	36918210	A5SS	0.25	50	50	ENSMUST00000037623.15	ENSMUSG00000039114.17	Nrn1	chr13	protein_coding	neuritin 1
chr13	36914225	36915618	-	36914225	36918210	A5SS	0.25	50	50	ENSMUST00000037623.15	ENSMUSG00000039114.17	Nrn1	chr13	protein_coding	neuritin 1
chr13	36914225	36914496	-	36914225	36915618	A5SS	0.25	50	50	ENSMUST00000223611.2	ENSMUSG00000039114.17	Nrn1	chr13	protein_coding	neuritin 1
chr13	37231478	37234171	-	37231478	37233115	5pMXE	0.5	50	50	ENSMUST00000037491.11	ENSMUSG00000039109.18	F13a1	chr13	protein_coding	coagulation factor XIII, A1 subunit
chr13	37123221	37127865	-	37102609	37127865	A3SS	0.5	50	50	ENSMUST00000037491.11	ENSMUSG00000039109.18	F13a1	chr13	protein_coding	coagulation factor XIII, A1 subunit
chr13	37155803	37155922	-	37152099	37155922	A3SS	0.5	50	50	ENSMUST00000037491.11	ENSMUSG00000039109.18	F13a1	chr13	protein_coding	coagulation factor XIII, A1 subunit
chr13	37606131	37613996	-	37606131	37608180	5pMXE	0.5	50	50	ENSMUST00000189445.2	ENSMUSG00000100760.2	Gm4035	chr13	lncRNA	predicted gene 4035
chr13	37623815	37624152	-	37623815	37624033	A5SS	0.33	50	50	ENSMUST00000223647.2	ENSMUSG00000114791.2	Gm47730	chr13	lncRNA	predicted gene, 47730
chr13	37623815	37624157	-	37623815	37624033	A5SS	0.33	50	50	ENSMUST00000223647.2	ENSMUSG00000114791.2	Gm47730	chr13	lncRNA	predicted gene, 47730
chr13	37623815	37624157	-	37623815	37624152	A5SS	0.33	50	50	ENSMUST00000226104.2	ENSMUSG00000114791.2	Gm47730	chr13	lncRNA	predicted gene, 47730
chr13	37693324	37695577	+	37693324	37695156	A3SS	0.5	50	50	ENSMUST00000190396.2	ENSMUSG00000100022.3	Gm29590	chr13	lncRNA	predicted gene 29590
chr13	37693933	37695156	+	37693324	37695156	A5SS	0.5	50	50	ENSMUST00000190396.2	ENSMUSG00000100022.3	Gm29590	chr13	lncRNA	predicted gene 29590
chr13	37693933	37695125	+	37693933	37695156	A3SS	0.5	50	50	ENSMUST00000225227.2	ENSMUSG00000100022.3	Gm29590	chr13	lncRNA	predicted gene 29590
chr13	37730979	37731757	+	37727168	37731757	A5SS	0.5	50	50	ENSMUST00000224508.2	ENSMUSG00000114665.2	Lncbate6	chr13	lncRNA	brown adipose tissue enriched long noncoding RNA 6
chr13	37802769	37806825	-	37801861	37806825	A3SS	0.5	50	50	ENSMUST00000224987.2	ENSMUSG00000114404.2	Gm40915	chr13	lncRNA	predicted gene, 40915
chr13	37842746	37850428	-	37842746	37851474	A5SS	0.33	50	50	ENSMUST00000225013.2	ENSMUSG00000114828.2	AI463229	chr13	lncRNA	expressed sequence AI463229
chr13	37842746	37850747	-	37842746	37851474	A5SS	0.33	50	50	ENSMUST00000225013.2	ENSMUSG00000114828.2	AI463229	chr13	lncRNA	expressed sequence AI463229
chr13	37842746	37850747	-	37842746	37850428	5pMXE	0.33	50	50	ENSMUST00000225734.2	ENSMUSG00000114828.2	AI463229	chr13	lncRNA	expressed sequence AI463229
chr13	37883394	37884833	-	37876139	37884833	A3SS	0.5	50	50	ENSMUST00000225448.2	ENSMUSG00000114732.2	Gm40918	chr13	lncRNA	predicted gene, 40918
chr13	37885004	37900226	-	37885004	37885723	A5SS&ES	0.5	50	50	ENSMUST00000225448.2	ENSMUSG00000114732.2	Gm40918	chr13	lncRNA	predicted gene, 40918
chr13	37946048	37948457	+	37946048	37951812	A3SS	0.5	50	50	ENSMUST00000225061.2	ENSMUSG00000114800.2	Gm31600	chr13	lncRNA	predicted gene, 31600
chr13	38010028	38072847	+	37962533	38072847	A5SS	0.12	50	50	ENSMUST00000122842.8	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38010320	38072847	+	37962533	38072847	A5SS	0.12	50	50	ENSMUST00000122842.8	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38010949	38072847	+	37962533	38072847	A5SS	0.12	50	50	ENSMUST00000122842.8	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38010951	38072847	+	37962533	38072847	A5SS	0.12	50	50	ENSMUST00000122842.8	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38011707	38072847	+	37962533	38072847	A5SS	0.12	50	50	ENSMUST00000122842.8	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38042069	38072847	+	37962533	38072847	A5SS	0.12	50	50	ENSMUST00000122842.8	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38072656	38072847	+	37962533	38072847	A5SS	0.12	50	50	ENSMUST00000122842.8	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38010320	38072847	+	38010028	38072847	A5SS	0.12	50	50	ENSMUST00000138043.8	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38010949	38072847	+	38010028	38072847	A5SS	0.12	50	50	ENSMUST00000138043.8	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38010951	38072847	+	38010028	38072847	A5SS	0.12	50	50	ENSMUST00000138043.8	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38011707	38072847	+	38010028	38072847	A5SS	0.12	50	50	ENSMUST00000138043.8	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38042069	38072847	+	38010028	38072847	A5SS	0.12	50	50	ENSMUST00000138043.8	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38072656	38072847	+	38010028	38072847	A5SS	0.12	50	50	ENSMUST00000138043.8	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38010949	38072847	+	38010320	38072847	A5SS	0.12	50	50	ENSMUST00000110238.10	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38010951	38072847	+	38010320	38072847	A5SS	0.12	50	50	ENSMUST00000110238.10	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38011707	38072847	+	38010320	38072847	A5SS	0.12	50	50	ENSMUST00000110238.10	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38042069	38072847	+	38010320	38072847	A5SS	0.12	50	50	ENSMUST00000110238.10	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38072656	38072847	+	38010320	38072847	A5SS	0.12	50	50	ENSMUST00000110238.10	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38079174	38082388	+	38077960	38082388	A5SS	0.5	50	50	ENSMUST00000110238.10	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38116465	38130833	+	38116465;38125680	38125519;38130833	ES	0.33	50	50	ENSMUST00000128570.9	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38131480	38132619	+	38131639	38132619	A5SS	0.5	50	50	ENSMUST00000128570.9	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38010949	38072847	+	38010951	38072847	A5SS	0.12	50	50	ENSMUST00000149745.8	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38011707	38072847	+	38010951	38072847	A5SS	0.12	50	50	ENSMUST00000149745.8	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38042069	38072847	+	38010951	38072847	A5SS	0.12	50	50	ENSMUST00000149745.8	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38072656	38072847	+	38010951	38072847	A5SS	0.12	50	50	ENSMUST00000149745.8	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38100571	38112099	+	38100571	38130833	A3SS	0.5	50	50	ENSMUST00000124373.8	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38011707	38072847	+	38010949	38072847	A5SS	0.12	50	50	ENSMUST00000124373.8	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38042069	38072847	+	38010949	38072847	A5SS	0.12	50	50	ENSMUST00000124373.8	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38072656	38072847	+	38010949	38072847	A5SS	0.12	50	50	ENSMUST00000124373.8	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38116465	38130833	+	38100571	38130833	A5SS	0.33	50	50	ENSMUST00000124373.8	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38125680	38130833	+	38100571	38130833	A5SS	0.33	50	50	ENSMUST00000124373.8	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38042069	38072847	+	38011707	38072847	A5SS	0.12	50	50	ENSMUST00000110237.9	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38072656	38072847	+	38011707	38072847	A5SS	0.12	50	50	ENSMUST00000110237.9	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38072656	38072847	+	38042069	38072847	A5SS	0.12	50	50	ENSMUST00000138110.8	ENSMUSG00000039087.18	Rreb1	chr13	protein_coding	ras responsive element binding protein 1
chr13	38163782	38167369	-	38163782;38167085	38167071;38167369	ES	0.33	50	50	ENSMUST00000225246.2	ENSMUSG00000021427.11	Ssr1	chr13	protein_coding	signal sequence receptor, alpha
chr13	38176085	38177477	-	38176085	38177981	A5SS	0.5	50	50	ENSMUST00000225246.2	ENSMUSG00000021427.11	Ssr1	chr13	protein_coding	signal sequence receptor, alpha
chr13	38151459;38163782	38163719;38167369	-	38151459	38167369	cassetteExon	0.5	100	100	ENSMUST00000225319.2	ENSMUSG00000021427.11	Ssr1	chr13	protein_coding	signal sequence receptor, alpha
chr13	38167085	38167369	-	38151459	38167369	A3SS	0.33	50	50	ENSMUST00000225319.2	ENSMUSG00000021427.11	Ssr1	chr13	protein_coding	signal sequence receptor, alpha
chr13	38151459	38167369	-	38163782	38167369	3pMXE	0.33	50	50	ENSMUST00000021864.8	ENSMUSG00000021427.11	Ssr1	chr13	protein_coding	signal sequence receptor, alpha
chr13	38212166	38220764	-	38212166;38216600	38216341;38220764	ES	0.5	50	50	ENSMUST00000110233.8	ENSMUSG00000044566.16	Cage1	chr13	protein_coding	cancer antigen 1
chr13	38216600	38220795	-	38216600	38220764	A5SS	0.5	50	50	ENSMUST00000110233.8	ENSMUSG00000044566.16	Cage1	chr13	protein_coding	cancer antigen 1
chr13	38212166	38220764	-	38212166	38216341	A5SS&ES	0.5	50	50	ENSMUST00000074969.11	ENSMUSG00000044566.16	Cage1	chr13	protein_coding	cancer antigen 1
chr13	38227954	38231221	+	38227954;38229291	38229249;38231221	ES	0.33	50	50	ENSMUST00000021866.10	ENSMUSG00000021428.10	Riok1	chr13	protein_coding	RIO kinase 1
chr13	38221507;38221997	38221727;38224049	+	38221507	38224049	cassetteExon	0.5	100	100	ENSMUST00000021866.10	ENSMUSG00000021428.10	Riok1	chr13	protein_coding	RIO kinase 1
chr13	38229291;38230883	38230827;38231221	+	38229291	38231221	cassetteExon	0.5	100	100	ENSMUST00000021866.10	ENSMUSG00000021428.10	Riok1	chr13	protein_coding	RIO kinase 1
chr13	38221604	38224049	+	38221507	38224049	A5SS	0.25	50	50	ENSMUST00000021866.10	ENSMUSG00000021428.10	Riok1	chr13	protein_coding	RIO kinase 1
chr13	38223079	38224049	+	38221507	38224049	A5SS	0.25	50	50	ENSMUST00000021866.10	ENSMUSG00000021428.10	Riok1	chr13	protein_coding	RIO kinase 1
chr13	38221604	38224049	+	38221997	38224049	A5SS&ES	0.25	50	50	ENSMUST00000223656.2	ENSMUSG00000021428.10	Riok1	chr13	protein_coding	RIO kinase 1
chr13	38223079	38224049	+	38221997	38224049	A5SS	0.25	50	50	ENSMUST00000223656.2	ENSMUSG00000021428.10	Riok1	chr13	protein_coding	RIO kinase 1
chr13	38223079	38224049	+	38221604	38224049	A5SS	0.25	50	50	ENSMUST00000225954.2	ENSMUSG00000021428.10	Riok1	chr13	protein_coding	RIO kinase 1
chr13	38227954	38231221	+	38229291	38231221	A5SS	0.33	50	50	ENSMUST00000226006.2	ENSMUSG00000021428.10	Riok1	chr13	protein_coding	RIO kinase 1
chr13	38230883	38231221	+	38227954	38231221	A5SS	0.33	50	50	ENSMUST00000224477.2	ENSMUSG00000021428.10	Riok1	chr13	protein_coding	RIO kinase 1
chr13	38375834	38378672	+	38377631	38378672	A5SS	0.5	50	50	ENSMUST00000124830.3	ENSMUSG00000054889.11	Dsp	chr13	protein_coding	desmoplakin
chr13	38395117	38398581	+	38395117	38400301	A3SS	0.5	50	50	ENSMUST00000091641.13	ENSMUSG00000021431.16	Snrnp48	chr13	protein_coding	small nuclear ribonucleoprotein 48 (U11/U12)
chr13	38400214	38400301	+	38395117	38400301	A5SS	0.5	50	50	ENSMUST00000091641.13	ENSMUSG00000021431.16	Snrnp48	chr13	protein_coding	small nuclear ribonucleoprotein 48 (U11/U12)
chr13	38530563	38541710	+	38530563	38653590	A3SS	0.5	50	50	ENSMUST00000171970.3	ENSMUSG00000039004.7	Bmp6	chr13	protein_coding	bone morphogenetic protein 6
chr13	38578491	38653590	+	38530563	38653590	A5SS	0.5	50	50	ENSMUST00000171970.3	ENSMUSG00000039004.7	Bmp6	chr13	protein_coding	bone morphogenetic protein 6
chr13	38644477	38644791	-	38638927	38644791	A3SS	0.5	50	50	ENSMUST00000224802.2	ENSMUSG00000114895.2	4930579J19Rik	chr13	lncRNA	RIKEN cDNA 4930579J19 gene
chr13	38644981	38645205	-	38644972	38645205	A3SS	0.5	50	50	ENSMUST00000224802.2	ENSMUSG00000114895.2	4930579J19Rik	chr13	lncRNA	RIKEN cDNA 4930579J19 gene
chr13	38707454	38712528	-	38707454	38712164	5pMXE	0.33	50	50	ENSMUST00000035988.16	ENSMUSG00000038991.18	Txndc5	chr13	protein_coding	thioredoxin domain containing 5
chr13	38707454	38711651	-	38707454	38712164	A5SS	0.33	50	50	ENSMUST00000035988.16	ENSMUSG00000038991.18	Txndc5	chr13	protein_coding	thioredoxin domain containing 5
chr13	38707454	38712528	-	38707454	38711651	5pMXE	0.33	50	50	ENSMUST00000160653.2	ENSMUSG00000038991.18	Txndc5	chr13	protein_coding	thioredoxin domain containing 5
chr13	38788004	38796619	-	38777408	38796619	A3SS	0.33	50	50	ENSMUST00000224115.2	ENSMUSG00000038982.11	Bloc1s5	chr13	protein_coding	biogenesis of lysosomal organelles complex-1, subunit 5, muted
chr13	38796023	38796619	-	38777408	38796619	A3SS	0.33	50	50	ENSMUST00000224115.2	ENSMUSG00000038982.11	Bloc1s5	chr13	protein_coding	biogenesis of lysosomal organelles complex-1, subunit 5, muted
chr13	38796023	38796619	-	38788004	38796619	A3SS	0.33	50	50	ENSMUST00000035899.8	ENSMUSG00000038982.11	Bloc1s5	chr13	protein_coding	biogenesis of lysosomal organelles complex-1, subunit 5, muted
chr13	39057492	39080593	+	38931808	39080593	A5SS	0.5	50	50	ENSMUST00000224240.2	ENSMUSG00000114767.2	Gm46392	chr13	lncRNA	predicted gene, 46392
chr13	38966827	39009559	-	38966827	38977579	5pMXE	0.5	50	50	ENSMUST00000224004.2	ENSMUSG00000114319.2	Gm47509	chr13	lncRNA	predicted gene, 47509
chr13	39008418	39009559	-	38966827	39009559	A3SS	0.5	50	50	ENSMUST00000226011.2	ENSMUSG00000114319.2	Gm47509	chr13	lncRNA	predicted gene, 47509
chr13	39127142	39138085	-	39127142;39128630	39128476;39138085	ES	0.5	50	50	ENSMUST00000021870.12	ENSMUSG00000021432.16	Slc35b3	chr13	protein_coding	solute carrier family 35, member B3
chr13	39116892;39117564	39117432;39118714	-	39116892	39118714	cassetteExon	0.5	100	100	ENSMUST00000021870.12	ENSMUSG00000021432.16	Slc35b3	chr13	protein_coding	solute carrier family 35, member B3
chr13	39124021	39127035	-	39123948	39127035	A3SS	0.5	50	50	ENSMUST00000021870.12	ENSMUSG00000021432.16	Slc35b3	chr13	protein_coding	solute carrier family 35, member B3
chr13	39128630	39139797	-	39128630	39138085	A5SS&ES	0.5	50	50	ENSMUST00000021870.12	ENSMUSG00000021432.16	Slc35b3	chr13	protein_coding	solute carrier family 35, member B3
chr13	39138206	39139797	-	39138206	39139625	A5SS	0.5	50	50	ENSMUST00000021870.12	ENSMUSG00000021432.16	Slc35b3	chr13	protein_coding	solute carrier family 35, member B3
chr13	39139912	39144139	-	39139912	39144589	A5SS	0.25	50	50	ENSMUST00000021870.12	ENSMUSG00000021432.16	Slc35b3	chr13	protein_coding	solute carrier family 35, member B3
chr13	39139912	39144386	-	39139912	39144589	A5SS	0.25	50	50	ENSMUST00000021870.12	ENSMUSG00000021432.16	Slc35b3	chr13	protein_coding	solute carrier family 35, member B3
chr13	39139912	39144408	-	39139912	39144589	A5SS	0.25	50	50	ENSMUST00000021870.12	ENSMUSG00000021432.16	Slc35b3	chr13	protein_coding	solute carrier family 35, member B3
chr13	39139912	39144139	-	39139912	39144408	A5SS	0.25	50	50	ENSMUST00000225432.2	ENSMUSG00000021432.16	Slc35b3	chr13	protein_coding	solute carrier family 35, member B3
chr13	39139912	39144386	-	39139912	39144408	A5SS	0.25	50	50	ENSMUST00000225432.2	ENSMUSG00000021432.16	Slc35b3	chr13	protein_coding	solute carrier family 35, member B3
chr13	39139912	39144139	-	39139912	39144386	A5SS	0.25	50	50	ENSMUST00000167513.3	ENSMUSG00000021432.16	Slc35b3	chr13	protein_coding	solute carrier family 35, member B3
chr13	39127142;39138206	39138085;39139797	-	39127142;39128630	39128476;39139797	MXE	0.5	100	100	ENSMUST00000225568.2	ENSMUSG00000021432.16	Slc35b3	chr13	protein_coding	solute carrier family 35, member B3
chr13	39128630;39138206	39138085;39139797	-	39128630	39139797	cassetteExon	0.5	100	100	ENSMUST00000225568.2	ENSMUSG00000021432.16	Slc35b3	chr13	protein_coding	solute carrier family 35, member B3
chr13	39127142	39138085	-	39128630	39138085	3pMXE	0.5	50	50	ENSMUST00000225331.2	ENSMUSG00000021432.16	Slc35b3	chr13	protein_coding	solute carrier family 35, member B3
chr13	39848932;39852542	39852386;39865467	+	39848932	39865467	cassetteExon	0.5	100	100	ENSMUST00000225217.2	ENSMUSG00000114841.2	Gm47352	chr13	lncRNA	predicted gene, 47352
chr13	39926358;39940636	39940376;39944671	-	39926358	39944671	cassetteExon	0.5	100	100	ENSMUST00000224577.2	ENSMUSG00000114710.2	Gm40923	chr13	lncRNA	predicted gene, 40923
chr13	39945174	39946152	+	39945174	39977686	A3SS	0.5	50	50	ENSMUST00000224219.2	ENSMUSG00000114491.2	A230103O09Rik	chr13	lncRNA	RIKEN cDNA A230103O09 gene
chr13	39970688	39984037	+	39977882	39984037	A5SS&ES	0.25	50	50	ENSMUST00000224219.2	ENSMUSG00000114491.2	A230103O09Rik	chr13	lncRNA	RIKEN cDNA A230103O09 gene
chr13	39976089	39984037	+	39977882	39984037	A5SS&ES	0.25	50	50	ENSMUST00000224219.2	ENSMUSG00000114491.2	A230103O09Rik	chr13	lncRNA	RIKEN cDNA A230103O09 gene
chr13	39977949	39984037	+	39977882	39984037	A5SS	0.25	50	50	ENSMUST00000224219.2	ENSMUSG00000114491.2	A230103O09Rik	chr13	lncRNA	RIKEN cDNA A230103O09 gene
chr13	39970688	39984037	+	39970688;39976089	39975948;39984037	ES	0.25	50	50	ENSMUST00000224260.2	ENSMUSG00000114491.2	A230103O09Rik	chr13	lncRNA	RIKEN cDNA A230103O09 gene
chr13	39977949	39984037	+	39976089	39984037	A5SS	0.25	50	50	ENSMUST00000224260.2	ENSMUSG00000114491.2	A230103O09Rik	chr13	lncRNA	RIKEN cDNA A230103O09 gene
chr13	39977949	39984037	+	39970688	39984037	A5SS	0.25	50	50	ENSMUST00000223664.2	ENSMUSG00000114491.2	A230103O09Rik	chr13	lncRNA	RIKEN cDNA A230103O09 gene
chr13	40362333	40408914	-	40362333;40368002	40367926;40408914	ES	0.5	50	50	ENSMUST00000054635.8	ENSMUSG00000047094.10	Ofcc1	chr13	protein_coding	orofacial cleft 1 candidate 1
chr13	40882252	40884921	-	40882252	40883515	5pMXE	0.2	50	50	ENSMUST00000021787.7	ENSMUSG00000021359.17	Tfap2a	chr13	protein_coding	transcription factor AP-2, alpha
chr13	40882252	40887146	-	40882252	40883515	5pMXE	0.2	50	50	ENSMUST00000021787.7	ENSMUSG00000021359.17	Tfap2a	chr13	protein_coding	transcription factor AP-2, alpha
chr13	40882252	40891595	-	40882252	40883515	5pMXE	0.2	50	50	ENSMUST00000021787.7	ENSMUSG00000021359.17	Tfap2a	chr13	protein_coding	transcription factor AP-2, alpha
chr13	40882252	40882793	-	40882252	40883515	A5SS	0.2	50	50	ENSMUST00000021787.7	ENSMUSG00000021359.17	Tfap2a	chr13	protein_coding	transcription factor AP-2, alpha
chr13	40882252	40891595	-	40882252	40887146	5pMXE	0.2	50	50	ENSMUST00000110193.9	ENSMUSG00000021359.17	Tfap2a	chr13	protein_coding	transcription factor AP-2, alpha
chr13	40882252	40882793	-	40882252	40887146	A5SS	0.2	50	50	ENSMUST00000110193.9	ENSMUSG00000021359.17	Tfap2a	chr13	protein_coding	transcription factor AP-2, alpha
chr13	40882252	40884921	-	40882252	40887146	A5SS	0.2	50	50	ENSMUST00000110193.9	ENSMUSG00000021359.17	Tfap2a	chr13	protein_coding	transcription factor AP-2, alpha
chr13	40882252	40891595	-	40882252	40884921	5pMXE	0.2	50	50	ENSMUST00000224319.2	ENSMUSG00000021359.17	Tfap2a	chr13	protein_coding	transcription factor AP-2, alpha
chr13	40882252	40882793	-	40882252	40884921	A5SS	0.2	50	50	ENSMUST00000224319.2	ENSMUSG00000021359.17	Tfap2a	chr13	protein_coding	transcription factor AP-2, alpha
chr13	40882252	40882793	-	40882252	40891595	A5SS	0.2	50	50	ENSMUST00000223869.2	ENSMUSG00000021359.17	Tfap2a	chr13	protein_coding	transcription factor AP-2, alpha
chr13	40907753	40908305	-	40907753	40908323	A5SS	0.5	50	50	ENSMUST00000225467.2	ENSMUSG00000114640.2	Gm48107	chr13	lncRNA	predicted gene, 48107
chr13	41041761	41107052	+	41014749	41107052	A5SS	0.25	50	50	ENSMUST00000110191.10	ENSMUSG00000021360.17	Gcnt2	chr13	protein_coding	glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
chr13	41072277	41107052	+	41014749	41107052	A5SS	0.25	50	50	ENSMUST00000110191.10	ENSMUSG00000021360.17	Gcnt2	chr13	protein_coding	glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
chr13	41100297	41107052	+	41014749	41107052	A5SS	0.25	50	50	ENSMUST00000110191.10	ENSMUSG00000021360.17	Gcnt2	chr13	protein_coding	glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
chr13	41072277	41107052	+	41041761	41107052	A5SS	0.25	50	50	ENSMUST00000069958.15	ENSMUSG00000021360.17	Gcnt2	chr13	protein_coding	glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
chr13	41100297	41107052	+	41041761	41107052	A5SS	0.25	50	50	ENSMUST00000069958.15	ENSMUSG00000021360.17	Gcnt2	chr13	protein_coding	glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
chr13	41100297	41107052	+	41072277	41107052	A5SS	0.25	50	50	ENSMUST00000067778.8	ENSMUSG00000021360.17	Gcnt2	chr13	protein_coding	glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
chr13	41154889	41161492	+	41154889;41158375	41158213;41161492	ES	0.5	50	50	ENSMUST00000046951.10	ENSMUSG00000038683.17	Pak1ip1	chr13	protein_coding	PAK1 interacting protein 1
chr13	41180038	41186001	-	41180038;41183612	41183493;41186001	ES	0.5	50	50	ENSMUST00000225084.2	ENSMUSG00000021363.15	Mak	chr13	protein_coding	male germ cell-associated kinase
chr13	41183612	41188230	-	41183612;41186075	41186001;41188230	ES	0.25	50	50	ENSMUST00000225084.2	ENSMUSG00000021363.15	Mak	chr13	protein_coding	male germ cell-associated kinase
chr13	41183615	41188230	-	41186075	41188230	A3SS&ES	0.25	50	50	ENSMUST00000225084.2	ENSMUSG00000021363.15	Mak	chr13	protein_coding	male germ cell-associated kinase
chr13	41204965	41209170	-	41206850	41209170	A3SS&ES	0.5	50	50	ENSMUST00000225084.2	ENSMUSG00000021363.15	Mak	chr13	protein_coding	male germ cell-associated kinase
chr13	41180038	41188230	-	41180038;41183615	41183493;41188230	ES	0.25	50	50	ENSMUST00000021792.5	ENSMUSG00000021363.15	Mak	chr13	protein_coding	male germ cell-associated kinase
chr13	41180038;41186075	41186001;41188230	-	41180038;41183615	41183493;41188230	MXE	0.5	100	100	ENSMUST00000021792.5	ENSMUSG00000021363.15	Mak	chr13	protein_coding	male germ cell-associated kinase
chr13	41183612	41188230	-	41183615	41188230	A3SS	0.25	50	50	ENSMUST00000021792.5	ENSMUSG00000021363.15	Mak	chr13	protein_coding	male germ cell-associated kinase
chr13	41223941	41232937	-	41223941	41233078	A5SS	0.5	50	50	ENSMUST00000165087.8	ENSMUSG00000021363.15	Mak	chr13	protein_coding	male germ cell-associated kinase
chr13	41180038;41183612	41183493;41188230	-	41180038	41188230	cassetteExon	0.5	100	100	ENSMUST00000225789.2	ENSMUSG00000021363.15	Mak	chr13	protein_coding	male germ cell-associated kinase
chr13	41180038;41186075	41186001;41188230	-	41180038	41188230	cassetteExon	0.5	100	100	ENSMUST00000225789.2	ENSMUSG00000021363.15	Mak	chr13	protein_coding	male germ cell-associated kinase
chr13	41180038;41186075	41186001;41188230	-	41180038;41183612	41183493;41188230	MXE	0.5	100	100	ENSMUST00000224740.2	ENSMUSG00000021363.15	Mak	chr13	protein_coding	male germ cell-associated kinase
chr13	41309121	41316548	+	41309121;41310993	41310910;41316548	ES	0.5	50	50	ENSMUST00000124093.3	ENSMUSG00000038651.16	Sycp2l	chr13	protein_coding	synaptonemal complex protein 2-like
chr13	41350674	41373513	-	41350674	41373831	A5SS	0.5	50	50	ENSMUST00000021793.15	ENSMUSG00000021364.17	Elovl2	chr13	protein_coding	elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2
chr13	41585839	41640633	-	41579500	41640633	A3SS	0.33	50	50	ENSMUST00000021794.14	ENSMUSG00000021365.16	Nedd9	chr13	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 9
chr13	41594678	41640633	-	41579500	41640633	A3SS	0.33	50	50	ENSMUST00000021794.14	ENSMUSG00000021365.16	Nedd9	chr13	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 9
chr13	41492496	41512329	-	41492496	41579337	A5SS	0.33	50	50	ENSMUST00000021794.14	ENSMUSG00000021365.16	Nedd9	chr13	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 9
chr13	41492496	41513095	-	41492496	41579337	A5SS	0.33	50	50	ENSMUST00000021794.14	ENSMUSG00000021365.16	Nedd9	chr13	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 9
chr13	41492496	41513095	-	41492496	41512329	5pMXE	0.33	50	50	ENSMUST00000163623.3	ENSMUSG00000021365.16	Nedd9	chr13	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 9
chr13	41594678	41640633	-	41585839	41640633	A3SS	0.33	50	50	ENSMUST00000224083.2	ENSMUSG00000021365.16	Nedd9	chr13	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 9
chr13	41640694	41663654	+	41640694	41666979	A3SS	0.5	50	50	ENSMUST00000224440.2	ENSMUSG00000114585.2	Gm32401	chr13	lncRNA	predicted gene, 32401
chr13	41667049	41669793	+	41667049	41696984	A3SS	0.5	50	50	ENSMUST00000224440.2	ENSMUSG00000114585.2	Gm32401	chr13	lncRNA	predicted gene, 32401
chr13	41666894	41666979	+	41640694	41666979	A5SS	0.5	50	50	ENSMUST00000224440.2	ENSMUSG00000114585.2	Gm32401	chr13	lncRNA	predicted gene, 32401
chr13	41759788;41781624	41781454;41787932	+	41759788	41787932	cassetteExon	0.5	100	100	ENSMUST00000221694.2	ENSMUSG00000087370.4	Tmem170b	chr13	protein_coding	transmembrane protein 170B
chr13	41807194	41809029	+	41807194;41807961	41807856;41809029	ES	0.5	50	50	ENSMUST00000221920.2	ENSMUSG00000054258.10	Gm5082	chr13	lncRNA	predicted gene 5082
chr13	41804372	41807123	+	41803605	41807123	A5SS	0.5	50	50	ENSMUST00000221920.2	ENSMUSG00000054258.10	Gm5082	chr13	lncRNA	predicted gene 5082
chr13	41967792	41981619	-	41967792;41969748	41969614;41981619	ES	0.5	50	50	ENSMUST00000072012.10	ENSMUSG00000058022.15	Adtrp	chr13	protein_coding	androgen dependent TFPI regulating protein
chr13	41981861	42000967	-	41981861	42000918	5pMXE	0.5	50	50	ENSMUST00000072012.10	ENSMUSG00000058022.15	Adtrp	chr13	protein_coding	androgen dependent TFPI regulating protein
chr13	41931099;41964922	41964828;41967691	-	41931099	41967691	cassetteExon	0.5	100	100	ENSMUST00000072012.10	ENSMUSG00000058022.15	Adtrp	chr13	protein_coding	androgen dependent TFPI regulating protein
chr13	41931099	41953974	-	41931099	41967691	A5SS	0.33	50	50	ENSMUST00000072012.10	ENSMUSG00000058022.15	Adtrp	chr13	protein_coding	androgen dependent TFPI regulating protein
chr13	41931099	41953974	-	41931099	41964828	A5SS	0.33	50	50	ENSMUST00000220680.2	ENSMUSG00000058022.15	Adtrp	chr13	protein_coding	androgen dependent TFPI regulating protein
chr13	41967792	41981619	-	41967792	41969614	A5SS&ES	0.5	50	50	ENSMUST00000223337.2	ENSMUSG00000058022.15	Adtrp	chr13	protein_coding	androgen dependent TFPI regulating protein
chr13	42321139;42322785	42322717;42334908	+	42321139	42334908	cassetteExon	0.5	100	100	ENSMUST00000060148.6	ENSMUSG00000021366.9	Hivep1	chr13	protein_coding	human immunodeficiency virus type I enhancer binding protein 1
chr13	42205931	42208876	+	42205566	42208876	A5SS	0.5	50	50	ENSMUST00000060148.6	ENSMUSG00000021366.9	Hivep1	chr13	protein_coding	human immunodeficiency virus type I enhancer binding protein 1
chr13	43210822;43213253	43213047;43231131	+	43210822	43231131	cassetteExon	0.5	100	100	ENSMUST00000128646.8	ENSMUSG00000054728.18	Phactr1	chr13	protein_coding	phosphatase and actin regulator 1
chr13	43287479;43287799	43287579;43288650	+	43287479	43288650	cassetteExon	0.5	100	100	ENSMUST00000128646.8	ENSMUSG00000054728.18	Phactr1	chr13	protein_coding	phosphatase and actin regulator 1
chr13	42835217	42836126	+	42834402	42836126	A5SS	0.5	50	50	ENSMUST00000128646.8	ENSMUSG00000054728.18	Phactr1	chr13	protein_coding	phosphatase and actin regulator 1
chr13	43019963	43110093	+	42863326	43110093	A5SS	0.25	50	50	ENSMUST00000128646.8	ENSMUSG00000054728.18	Phactr1	chr13	protein_coding	phosphatase and actin regulator 1
chr13	43020431	43110093	+	42863326	43110093	A5SS	0.25	50	50	ENSMUST00000128646.8	ENSMUSG00000054728.18	Phactr1	chr13	protein_coding	phosphatase and actin regulator 1
chr13	43070343	43110093	+	42863326	43110093	A5SS	0.25	50	50	ENSMUST00000128646.8	ENSMUSG00000054728.18	Phactr1	chr13	protein_coding	phosphatase and actin regulator 1
chr13	43265751	43276475	+	43250282	43276475	A5SS	0.5	50	50	ENSMUST00000128646.8	ENSMUSG00000054728.18	Phactr1	chr13	protein_coding	phosphatase and actin regulator 1
chr13	43279629	43281614	+	43276530	43281614	A5SS	0.33	50	50	ENSMUST00000128646.8	ENSMUSG00000054728.18	Phactr1	chr13	protein_coding	phosphatase and actin regulator 1
chr13	43281075	43281614	+	43276530	43281614	A5SS	0.33	50	50	ENSMUST00000128646.8	ENSMUSG00000054728.18	Phactr1	chr13	protein_coding	phosphatase and actin regulator 1
chr13	43020431	43110093	+	43019963	43110093	A5SS	0.25	50	50	ENSMUST00000131942.2	ENSMUSG00000054728.18	Phactr1	chr13	protein_coding	phosphatase and actin regulator 1
chr13	43070343	43110093	+	43019963	43110093	A5SS	0.25	50	50	ENSMUST00000131942.2	ENSMUSG00000054728.18	Phactr1	chr13	protein_coding	phosphatase and actin regulator 1
chr13	43070343	43110093	+	43020431	43110093	A5SS	0.25	50	50	ENSMUST00000127859.2	ENSMUSG00000054728.18	Phactr1	chr13	protein_coding	phosphatase and actin regulator 1
chr13	43279392	43280875	+	43279392;43280785	43280756;43280875	ES	0.5	50	50	ENSMUST00000150620.8	ENSMUSG00000054728.18	Phactr1	chr13	protein_coding	phosphatase and actin regulator 1
chr13	43279629	43281614	+	43281075	43281614	A5SS&ES	0.5	50	50	ENSMUST00000150620.8	ENSMUSG00000054728.18	Phactr1	chr13	protein_coding	phosphatase and actin regulator 1
chr13	43305456;43306675	43306546;43308165	-	43305456	43308165	cassetteExon	0.5	100	100	ENSMUST00000220579.2	ENSMUSG00000021368.16	Tbc1d7	chr13	protein_coding	TBC1 domain family, member 7
chr13	43305456;43306675	43306660;43308165	-	43305456	43308165	cassetteExon	0.5	100	100	ENSMUST00000220579.2	ENSMUSG00000021368.16	Tbc1d7	chr13	protein_coding	TBC1 domain family, member 7
chr13	43322330;43322726	43322594;43323278	-	43322330	43323278	cassetteExon	0.5	100	100	ENSMUST00000179852.9	ENSMUSG00000021368.16	Tbc1d7	chr13	protein_coding	TBC1 domain family, member 7
chr13	43318907	43322250	-	43318942	43322250	A3SS	0.5	50	50	ENSMUST00000179852.9	ENSMUSG00000021368.16	Tbc1d7	chr13	protein_coding	TBC1 domain family, member 7
chr13	43305456	43306660	-	43305456	43306546	A5SS	0.33	50	50	ENSMUST00000179852.9	ENSMUSG00000021368.16	Tbc1d7	chr13	protein_coding	TBC1 domain family, member 7
chr13	43323423	43324805	-	43323423	43324785	A5SS	0.5	50	50	ENSMUST00000179852.9	ENSMUSG00000021368.16	Tbc1d7	chr13	protein_coding	TBC1 domain family, member 7
chr13	43305456	43308165	-	43306675	43308165	3pMXE	0.5	50	50	ENSMUST00000223000.2	ENSMUSG00000021368.16	Tbc1d7	chr13	protein_coding	TBC1 domain family, member 7
chr13	43419180	43456721	-	43354720	43456721	A3SS	0.5	50	50	ENSMUST00000055341.7	ENSMUSG00000051335.7	Gfod1	chr13	protein_coding	glucose-fructose oxidoreductase domain containing 1
chr13	43524344	43530171	+	43524344;43525441	43525308;43530171	ES	0.5	50	50	ENSMUST00000222489.2	ENSMUSG00000054021.7	Sirt5	chr13	protein_coding	sirtuin 5
chr13	43519216	43524195	+	43519020	43524195	A5SS	0.33	50	50	ENSMUST00000222489.2	ENSMUSG00000054021.7	Sirt5	chr13	protein_coding	sirtuin 5
chr13	43519456	43524195	+	43519020	43524195	A5SS	0.33	50	50	ENSMUST00000222489.2	ENSMUSG00000054021.7	Sirt5	chr13	protein_coding	sirtuin 5
chr13	43539089	43548213	+	43539089	43540526	3pMXE	0.33	50	50	ENSMUST00000221481.2	ENSMUSG00000054021.7	Sirt5	chr13	protein_coding	sirtuin 5
chr13	43539089	43539210	+	43539089	43540526	A3SS	0.33	50	50	ENSMUST00000221481.2	ENSMUSG00000054021.7	Sirt5	chr13	protein_coding	sirtuin 5
chr13	43539089	43539210	+	43539089	43548213	A3SS	0.33	50	50	ENSMUST00000223194.2	ENSMUSG00000054021.7	Sirt5	chr13	protein_coding	sirtuin 5
chr13	43519456	43524195	+	43519216	43524195	A5SS	0.33	50	50	ENSMUST00000220458.2	ENSMUSG00000054021.7	Sirt5	chr13	protein_coding	sirtuin 5
chr13	43557165	43565887	-	43557165;43560199	43560088;43565887	ES	0.5	50	50	ENSMUST00000144326.4	ENSMUSG00000038546.10	Ranbp9	chr13	protein_coding	RAN binding protein 9
chr13	43576139	43583924	-	43576139;43578690	43578506;43583924	ES	0.5	50	50	ENSMUST00000144326.4	ENSMUSG00000038546.10	Ranbp9	chr13	protein_coding	RAN binding protein 9
chr13	43578690	43588290	-	43578690;43583946	43583924;43588290	ES	0.5	50	50	ENSMUST00000144326.4	ENSMUSG00000038546.10	Ranbp9	chr13	protein_coding	RAN binding protein 9
chr13	43615299	43632344	-	43615299	43633888	A5SS	0.33	50	50	ENSMUST00000144326.4	ENSMUSG00000038546.10	Ranbp9	chr13	protein_coding	RAN binding protein 9
chr13	43615299	43632726	-	43615299	43633888	A5SS	0.33	50	50	ENSMUST00000144326.4	ENSMUSG00000038546.10	Ranbp9	chr13	protein_coding	RAN binding protein 9
chr13	43557165	43565887	-	43557165	43560088	5pMXE	0.5	50	50	ENSMUST00000220601.2	ENSMUSG00000038546.10	Ranbp9	chr13	protein_coding	RAN binding protein 9
chr13	43615299	43632726	-	43615299	43632344	5pMXE	0.33	50	50	ENSMUST00000222651.2	ENSMUSG00000038546.10	Ranbp9	chr13	protein_coding	RAN binding protein 9
chr13	43576139;43583946	43583924;43588290	-	43576139;43578690	43578506;43588290	MXE	0.5	100	100	ENSMUST00000222239.2	ENSMUSG00000038546.10	Ranbp9	chr13	protein_coding	RAN binding protein 9
chr13	43576139;43583946	43583924;43615188	-	43576139;43589618	43578506;43615188	MXE	0.5	100	100	ENSMUST00000222239.2	ENSMUSG00000038546.10	Ranbp9	chr13	protein_coding	RAN binding protein 9
chr13	43578690;43583946	43583924;43615188	-	43578690;43589618	43588290;43615188	MXE	0.5	100	100	ENSMUST00000222239.2	ENSMUSG00000038546.10	Ranbp9	chr13	protein_coding	RAN binding protein 9
chr13	43589618	43615188	-	43583946	43615188	A3SS	0.5	50	50	ENSMUST00000220500.2	ENSMUSG00000038546.10	Ranbp9	chr13	protein_coding	RAN binding protein 9
chr13	43578690	43588290	-	43578690	43583924	A5SS&ES	0.5	50	50	ENSMUST00000220500.2	ENSMUSG00000038546.10	Ranbp9	chr13	protein_coding	RAN binding protein 9
chr13	43583946	43588290	-	43583946	43615188	A5SS	0.5	50	50	ENSMUST00000220500.2	ENSMUSG00000038546.10	Ranbp9	chr13	protein_coding	RAN binding protein 9
chr13	43769543;43819298	43819234;43821236	+	43769543	43821236	cassetteExon	0.5	100	100	ENSMUST00000059986.3	ENSMUSG00000044164.3	Rnf182	chr13	protein_coding	ring finger protein 182
chr13	43998589	43999065	+	43998589	43999117	A3SS	0.5	50	50	ENSMUST00000223487.2	ENSMUSG00000114192.2	Gm33115	chr13	lncRNA	predicted gene, 33115
chr13	43997518	43998443	+	43996051	43998443	A5SS	0.5	50	50	ENSMUST00000223487.2	ENSMUSG00000114192.2	Gm33115	chr13	lncRNA	predicted gene, 33115
chr13	44278052	44278112	+	44278052	44278130	A3SS	0.5	50	50	ENSMUST00000163056.8	ENSMUSG00000089815.8	Gm5083	chr13	lncRNA	predicted gene 5083
chr13	44369635	44369847	-	44348783	44369847	A3SS	0.5	50	50	ENSMUST00000220765.2	ENSMUSG00000113186.2	A330076C08Rik	chr13	lncRNA	RIKEN cDNA A330076C08 gene
chr13	44348783	44351523	-	44348783	44369847	A5SS	0.5	50	50	ENSMUST00000220765.2	ENSMUSG00000113186.2	A330076C08Rik	chr13	lncRNA	RIKEN cDNA A330076C08 gene
chr13	44404508	44417217	-	44404508	44406031	5pMXE	0.5	50	50	ENSMUST00000222396.2	ENSMUSG00000113689.2	Gm29676	chr13	lncRNA	predicted gene, 29676
chr13	44609986	44611974	+	44609986	44610917	3pMXE	0.5	50	50	ENSMUST00000190628.7	ENSMUSG00000098144.9	1700029N11Rik	chr13	lncRNA	RIKEN cDNA 1700029N11 gene
chr13	44608767	44609764	+	44608767	44609761	A3SS	0.5	50	50	ENSMUST00000190628.7	ENSMUSG00000098144.9	1700029N11Rik	chr13	lncRNA	RIKEN cDNA 1700029N11 gene
chr13	44593337	44608688	+	44593329	44608688	A5SS	0.5	50	50	ENSMUST00000190628.7	ENSMUSG00000098144.9	1700029N11Rik	chr13	lncRNA	RIKEN cDNA 1700029N11 gene
chr13	44883253	44885189	+	44883253	44884927	3pMXE	0.5	50	50	ENSMUST00000174394.2	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44885392	45001756	+	44885392;44976991	44976856;45001756	ES	0.33	50	50	ENSMUST00000174068.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44976991	45027759	+	44976991	45001756	3pMXE	0.5	50	50	ENSMUST00000174068.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44885392;44912494	44912325;44976856	+	44885392	44976856	cassetteExon	0.5	100	100	ENSMUST00000174068.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44883411	44885189	+	44883253	44885189	A5SS	0.16	50	50	ENSMUST00000174068.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44884364	44885189	+	44883253	44885189	A5SS	0.16	50	50	ENSMUST00000174068.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44884364	44976856	+	44885392	44976856	A5SS&ES	0.25	50	50	ENSMUST00000174068.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44884388	44885189	+	44883253	44885189	A5SS	0.16	50	50	ENSMUST00000174068.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44884410	44885189	+	44883253	44885189	A5SS	0.16	50	50	ENSMUST00000174068.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44884878	44885189	+	44883253	44885189	A5SS	0.16	50	50	ENSMUST00000174068.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44887661	44976856	+	44885392	44976856	A5SS	0.25	50	50	ENSMUST00000174068.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44994356	45001756	+	44976991	45001756	A5SS	0.33	50	50	ENSMUST00000174068.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44885392	45001756	+	44885392	44976856	3pMXE	0.33	50	50	ENSMUST00000172830.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44884364	44885189	+	44883411	44885189	A5SS	0.16	50	50	ENSMUST00000172830.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44884388	44885189	+	44883411	44885189	A5SS	0.16	50	50	ENSMUST00000172830.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44884410	44885189	+	44883411	44885189	A5SS	0.16	50	50	ENSMUST00000172830.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44884878	44885189	+	44883411	44885189	A5SS	0.16	50	50	ENSMUST00000172830.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44884364	44976856	+	44884364;44885392	44885189;44976856	ES	0.25	50	50	ENSMUST00000173704.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44976991	45027759	+	44976991;45001897	45001756;45027759	ES	0.33	50	50	ENSMUST00000173704.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	45001897	45038180	+	45001897;45027928	45027759;45038180	ES	0.5	50	50	ENSMUST00000173704.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44884388	44885189	+	44884364	44885189	A5SS	0.16	50	50	ENSMUST00000173704.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44884410	44885189	+	44884364	44885189	A5SS	0.16	50	50	ENSMUST00000173704.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44884878	44885189	+	44884364	44885189	A5SS	0.16	50	50	ENSMUST00000173704.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44994356	45027759	+	45001897	45027759	A5SS&ES	0.33	50	50	ENSMUST00000173704.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44884388	44885189	+	44884410	44885189	A5SS	0.16	50	50	ENSMUST00000044608.14	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44884878	44885189	+	44884410	44885189	A5SS	0.16	50	50	ENSMUST00000044608.14	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44884364;44885392	44885189;45001756	+	44884364;44976991	44976856;45001756	MXE	0.5	100	100	ENSMUST00000173367.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44976991;45027928	45027759;45038180	+	44976991;45001897	45001756;45038180	MXE	0.5	100	100	ENSMUST00000173367.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44887661	44976856	+	44884364	44976856	A5SS	0.25	50	50	ENSMUST00000173367.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44912494	44976856	+	44884364	44976856	A5SS	0.25	50	50	ENSMUST00000173367.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	45001897	45038180	+	45001897	45027759	3pMXE	0.5	50	50	ENSMUST00000172708.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44885392;44976991	44976856;45027759	+	44885392;45001897	45001756;45027759	MXE	0.5	100	100	ENSMUST00000172708.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44885392	44912325	+	44885392	45001756	A3SS	0.33	50	50	ENSMUST00000172708.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44884878	44885189	+	44884388	44885189	A5SS	0.16	50	50	ENSMUST00000172708.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44994356	45001756	+	44885392	45001756	A5SS	0.33	50	50	ENSMUST00000172708.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44885392;45001897	45001756;45038180	+	44885392;45027928	44976856;45038180	MXE	0.5	100	100	ENSMUST00000172977.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44994356	45027759	+	44976991	45027759	A5SS	0.33	50	50	ENSMUST00000172977.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44887661	44976856	+	44912494	44976856	A5SS&ES	0.33	50	50	ENSMUST00000172924.8	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44994356	45027759	+	44994356;45001897	45001756;45027759	ES	0.5	50	50	ENSMUST00000173906.3	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	44994356;45001897	45001756;45038180	+	44994356;45027928	45027759;45038180	MXE	0.5	100	100	ENSMUST00000173003.2	ENSMUSG00000038518.16	Jarid2	chr13	protein_coding	jumonji, AT rich interactive domain 2
chr13	45123654	45139511	-	45123654;45136349	45136217;45139511	ES	0.5	50	50	ENSMUST00000222583.2	ENSMUSG00000057531.15	Dtnbp1	chr13	protein_coding	dystrobrevin binding protein 1
chr13	45147214	45154857	-	45147214;45149482	45149307;45154857	ES	0.5	50	50	ENSMUST00000222583.2	ENSMUSG00000057531.15	Dtnbp1	chr13	protein_coding	dystrobrevin binding protein 1
chr13	45076768;45080757	45080570;45084472	-	45076768	45084472	cassetteExon	0.5	100	100	ENSMUST00000222583.2	ENSMUSG00000057531.15	Dtnbp1	chr13	protein_coding	dystrobrevin binding protein 1
chr13	45084733	45123522	-	45106670	45123522	A3SS&ES	0.5	50	50	ENSMUST00000222583.2	ENSMUSG00000057531.15	Dtnbp1	chr13	protein_coding	dystrobrevin binding protein 1
chr13	45101750	45106648	-	45084627	45106648	A3SS	0.33	50	50	ENSMUST00000222583.2	ENSMUSG00000057531.15	Dtnbp1	chr13	protein_coding	dystrobrevin binding protein 1
chr13	45105859	45106648	-	45084627	45106648	A3SS	0.33	50	50	ENSMUST00000222583.2	ENSMUSG00000057531.15	Dtnbp1	chr13	protein_coding	dystrobrevin binding protein 1
chr13	45084627	45100345	-	45084627	45106648	A5SS	0.5	50	50	ENSMUST00000222583.2	ENSMUSG00000057531.15	Dtnbp1	chr13	protein_coding	dystrobrevin binding protein 1
chr13	45147214	45152996	-	45147214	45149307	A5SS&ES	0.33	50	50	ENSMUST00000222583.2	ENSMUSG00000057531.15	Dtnbp1	chr13	protein_coding	dystrobrevin binding protein 1
chr13	45147214	45155393	-	45147214	45154857	5pMXE	0.25	50	50	ENSMUST00000222990.2	ENSMUSG00000057531.15	Dtnbp1	chr13	protein_coding	dystrobrevin binding protein 1
chr13	45147214	45152996	-	45147214	45154857	A5SS	0.25	50	50	ENSMUST00000222990.2	ENSMUSG00000057531.15	Dtnbp1	chr13	protein_coding	dystrobrevin binding protein 1
chr13	45147214;45153190	45152996;45155393	-	45147214	45155393	cassetteExon	0.5	100	100	ENSMUST00000072329.15	ENSMUSG00000057531.15	Dtnbp1	chr13	protein_coding	dystrobrevin binding protein 1
chr13	45147214	45149307	-	45147214	45155393	A5SS	0.25	50	50	ENSMUST00000072329.15	ENSMUSG00000057531.15	Dtnbp1	chr13	protein_coding	dystrobrevin binding protein 1
chr13	45123654	45139511	-	45123654	45136217	5pMXE	0.5	50	50	ENSMUST00000221393.2	ENSMUSG00000057531.15	Dtnbp1	chr13	protein_coding	dystrobrevin binding protein 1
chr13	45105859	45106648	-	45101750	45106648	A3SS	0.5	50	50	ENSMUST00000223265.2	ENSMUSG00000057531.15	Dtnbp1	chr13	protein_coding	dystrobrevin binding protein 1
chr13	45123654	45139511	-	45136349	45139511	3pMXE	0.5	50	50	ENSMUST00000223524.2	ENSMUSG00000057531.15	Dtnbp1	chr13	protein_coding	dystrobrevin binding protein 1
chr13	45260490	45270831	+	45253568	45270831	A5SS	0.5	50	50	ENSMUST00000221315.2	ENSMUSG00000113553.2	Gm40932	chr13	lncRNA	predicted gene, 40932
chr13	45391995	45417418	+	45391995	45487101	A3SS	0.33	50	50	ENSMUST00000220736.2	ENSMUSG00000113772.2	Gm47448	chr13	lncRNA	predicted gene, 47448
chr13	45391995	45469055	+	45391995	45487101	A3SS	0.33	50	50	ENSMUST00000220736.2	ENSMUSG00000113772.2	Gm47448	chr13	lncRNA	predicted gene, 47448
chr13	45389943	45391811	+	45389973	45391811	A5SS	0.5	50	50	ENSMUST00000220736.2	ENSMUSG00000113772.2	Gm47448	chr13	lncRNA	predicted gene, 47448
chr13	45391995	45469055	+	45391995	45417418	3pMXE	0.33	50	50	ENSMUST00000220694.2	ENSMUSG00000113772.2	Gm47448	chr13	lncRNA	predicted gene, 47448
chr13	45544570	45544665	+	45543519	45544665	A5SS	0.5	50	50	ENSMUST00000038275.11	ENSMUSG00000038175.11	Mylip	chr13	protein_coding	myosin regulatory light chain interacting protein
chr13	45667390	45667871	+	45661219	45667871	A5SS	0.5	50	50	ENSMUST00000000260.13	ENSMUSG00000000253.14	Gmpr	chr13	protein_coding	guanosine monophosphate reductase
chr13	45722056	45888591	-	45722056;45851421	45851297;45888591	ES	0.5	50	50	ENSMUST00000091628.11	ENSMUSG00000046876.17	Atxn1	chr13	protein_coding	ataxin 1
chr13	46005932	46118291	-	46005932;46110051	46109931;46118291	ES	0.5	50	50	ENSMUST00000091628.11	ENSMUSG00000046876.17	Atxn1	chr13	protein_coding	ataxin 1
chr13	45711061	45720025	-	45711061	45720049	A5SS	0.5	50	50	ENSMUST00000091628.11	ENSMUSG00000046876.17	Atxn1	chr13	protein_coding	ataxin 1
chr13	46005932	46025656	-	46005932	46109931	A5SS	0.33	50	50	ENSMUST00000091628.11	ENSMUSG00000046876.17	Atxn1	chr13	protein_coding	ataxin 1
chr13	46005932	46025656	-	46005932	46118291	A5SS	0.33	50	50	ENSMUST00000222943.2	ENSMUSG00000046876.17	Atxn1	chr13	protein_coding	ataxin 1
chr13	46118859	46119164	+	46118859	46119387	A3SS	0.5	50	50	ENSMUST00000038032.5	ENSMUSG00000038152.5	5033430I15Rik	chr13	lncRNA	RIKEN cDNA 5033430I15 gene
chr13	46217136	46220949	+	46217136	46221045	A3SS	0.5	50	50	ENSMUST00000221550.2	ENSMUSG00000113860.2	Gm45949	chr13	lncRNA	predicted gene, 45949
chr13	46214197	46215332	+	46215125	46215332	A5SS&ES	0.5	50	50	ENSMUST00000221550.2	ENSMUSG00000113860.2	Gm45949	chr13	lncRNA	predicted gene, 45949
chr13	46575381;46575864	46575752;46582430	+	46575381	46582430	cassetteExon	0.5	100	100	ENSMUST00000037923.5	ENSMUSG00000038132.7	Rbm24	chr13	protein_coding	RNA binding motif protein 24
chr13	46574073	46575327	+	46573874	46575327	A5SS	0.5	50	50	ENSMUST00000037923.5	ENSMUSG00000038132.7	Rbm24	chr13	protein_coding	RNA binding motif protein 24
chr13	46649670	46655341	-	46649670;46653381	46653257;46655341	ES	0.5	50	50	ENSMUST00000225579.2	ENSMUSG00000114752.2	Gm35110	chr13	lncRNA	predicted gene, 35110
chr13	46627504;46628343	46628283;46646216	-	46627504	46646216	cassetteExon	0.5	100	100	ENSMUST00000225579.2	ENSMUSG00000114752.2	Gm35110	chr13	lncRNA	predicted gene, 35110
chr13	46793598;46798454	46798207;46800002	+	46793598	46800002	cassetteExon	0.5	100	100	ENSMUST00000021802.16	ENSMUSG00000021373.17	Cap2	chr13	protein_coding	CAP, adenylate cyclase-associated protein, 2 (yeast)
chr13	46655803	46684453	+	46679012	46684453	A5SS&ES	0.5	50	50	ENSMUST00000021802.16	ENSMUSG00000021373.17	Cap2	chr13	protein_coding	CAP, adenylate cyclase-associated protein, 2 (yeast)
chr13	46714057	46763072	+	46714057	46789097	A3SS	0.5	50	50	ENSMUST00000119341.2	ENSMUSG00000021373.17	Cap2	chr13	protein_coding	CAP, adenylate cyclase-associated protein, 2 (yeast)
chr13	46768831	46789097	+	46714057	46789097	A5SS	0.5	50	50	ENSMUST00000119341.2	ENSMUSG00000021373.17	Cap2	chr13	protein_coding	CAP, adenylate cyclase-associated protein, 2 (yeast)
chr13	46840974	46846988	-	46840974;46842726	46842535;46846988	ES	0.5	50	50	ENSMUST00000021803.10	ENSMUSG00000021374.11	Nup153	chr13	protein_coding	nucleoporin 153
chr13	46854557	46855080	-	46854563	46855080	A3SS	0.5	50	50	ENSMUST00000021803.10	ENSMUSG00000021374.11	Nup153	chr13	protein_coding	nucleoporin 153
chr13	46867309	46870577	-	46867345	46870577	A3SS	0.5	50	50	ENSMUST00000021803.10	ENSMUSG00000021374.11	Nup153	chr13	protein_coding	nucleoporin 153
chr13	46867345	46869532	-	46867345	46870577	A5SS	0.5	50	50	ENSMUST00000021803.10	ENSMUSG00000021374.11	Nup153	chr13	protein_coding	nucleoporin 153
chr13	46932469	46939989	-	46932469;46938868	46938722;46939989	ES	0.5	50	50	ENSMUST00000056978.8	ENSMUSG00000021375.12	Kif13a	chr13	protein_coding	kinesin family member 13A
chr13	46904102;46904249	46904178;46905557	-	46904102	46905557	cassetteExon	0.5	100	100	ENSMUST00000056978.8	ENSMUSG00000021375.12	Kif13a	chr13	protein_coding	kinesin family member 13A
chr13	46906348;46914243	46914139;46914749	-	46906348	46914749	cassetteExon	0.5	100	100	ENSMUST00000056978.8	ENSMUSG00000021375.12	Kif13a	chr13	protein_coding	kinesin family member 13A
chr13	46932469;46934140	46934102;46938722	-	46932469	46938722	cassetteExon	0.5	100	100	ENSMUST00000056978.8	ENSMUSG00000021375.12	Kif13a	chr13	protein_coding	kinesin family member 13A
chr13	46956205;46961752	46961633;46962367	-	46956205	46962367	cassetteExon	0.5	100	100	ENSMUST00000056978.8	ENSMUSG00000021375.12	Kif13a	chr13	protein_coding	kinesin family member 13A
chr13	47023116	47082692	-	47018307	47082692	A3SS	0.33	50	50	ENSMUST00000056978.8	ENSMUSG00000021375.12	Kif13a	chr13	protein_coding	kinesin family member 13A
chr13	47054884	47082692	-	47018307	47082692	A3SS	0.33	50	50	ENSMUST00000056978.8	ENSMUSG00000021375.12	Kif13a	chr13	protein_coding	kinesin family member 13A
chr13	47018307	47036141	-	47018307	47082692	A5SS	0.5	50	50	ENSMUST00000056978.8	ENSMUSG00000021375.12	Kif13a	chr13	protein_coding	kinesin family member 13A
chr13	46932469	46934102	-	46932469	46939989	A5SS	0.33	50	50	ENSMUST00000223856.2	ENSMUSG00000021375.12	Kif13a	chr13	protein_coding	kinesin family member 13A
chr13	47054884	47082692	-	47023116	47082692	A3SS	0.33	50	50	ENSMUST00000224457.2	ENSMUSG00000021375.12	Kif13a	chr13	protein_coding	kinesin family member 13A
chr13	47180772	47185894	-	47180772	47182358	5pMXE	0.5	50	50	ENSMUST00000224970.2	ENSMUSG00000021376.12	Tpmt	chr13	protein_coding	thiopurine methyltransferase
chr13	47178848	47180728	-	47176199	47180728	A3SS	0.33	50	50	ENSMUST00000224970.2	ENSMUSG00000021376.12	Tpmt	chr13	protein_coding	thiopurine methyltransferase
chr13	47178953	47180728	-	47176199	47180728	A3SS	0.33	50	50	ENSMUST00000224970.2	ENSMUSG00000021376.12	Tpmt	chr13	protein_coding	thiopurine methyltransferase
chr13	47180772	47185894	-	47180772;47182443	47182358;47185894	ES	0.5	50	50	ENSMUST00000021806.11	ENSMUSG00000021376.12	Tpmt	chr13	protein_coding	thiopurine methyltransferase
chr13	47195055	47198037	-	47195055	47196580	5pMXE	0.33	50	50	ENSMUST00000021806.11	ENSMUSG00000021376.12	Tpmt	chr13	protein_coding	thiopurine methyltransferase
chr13	47178848	47180728	-	47178953	47180728	A3SS	0.33	50	50	ENSMUST00000021806.11	ENSMUSG00000021376.12	Tpmt	chr13	protein_coding	thiopurine methyltransferase
chr13	47195071	47196580	-	47195055	47196580	A3SS	0.5	50	50	ENSMUST00000021806.11	ENSMUSG00000021376.12	Tpmt	chr13	protein_coding	thiopurine methyltransferase
chr13	47195055	47196603	-	47195055	47196580	A5SS	0.33	50	50	ENSMUST00000021806.11	ENSMUSG00000021376.12	Tpmt	chr13	protein_coding	thiopurine methyltransferase
chr13	47180772	47185894	-	47182443	47185894	3pMXE	0.5	50	50	ENSMUST00000136864.8	ENSMUSG00000021376.12	Tpmt	chr13	protein_coding	thiopurine methyltransferase
chr13	47195055	47198037	-	47195055	47196603	5pMXE	0.33	50	50	ENSMUST00000136864.8	ENSMUSG00000021376.12	Tpmt	chr13	protein_coding	thiopurine methyltransferase
chr13	47221058	47225368	+	47221058;47222111	47221940;47225368	ES	0.5	50	50	ENSMUST00000037025.16	ENSMUSG00000038080.18	Kdm1b	chr13	protein_coding	lysine (K)-specific demethylase 1B
chr13	47197146;47198471	47198379;47201379	+	47197146	47201379	cassetteExon	0.5	100	100	ENSMUST00000037025.16	ENSMUSG00000038080.18	Kdm1b	chr13	protein_coding	lysine (K)-specific demethylase 1B
chr13	47220084	47220921	+	47218121	47220921	A5SS	0.5	50	50	ENSMUST00000037025.16	ENSMUSG00000038080.18	Kdm1b	chr13	protein_coding	lysine (K)-specific demethylase 1B
chr13	47221058;47225495	47225368;47227187	+	47221058	47227187	cassetteExon	0.5	100	100	ENSMUST00000143518.3	ENSMUSG00000038080.18	Kdm1b	chr13	protein_coding	lysine (K)-specific demethylase 1B
chr13	47221058	47221940	+	47221058	47227187	A3SS	0.33	50	50	ENSMUST00000143518.3	ENSMUSG00000038080.18	Kdm1b	chr13	protein_coding	lysine (K)-specific demethylase 1B
chr13	47242091	47252819	-	47242091	47251631	5pMXE	0.33	50	50	ENSMUST00000138401.2	ENSMUSG00000021377.16	Dek	chr13	protein_coding	DEK proto-oncogene (DNA binding)
chr13	47242091;47246689	47246594;47251631	-	47242091	47251631	cassetteExon	0.5	100	100	ENSMUST00000138401.2	ENSMUSG00000021377.16	Dek	chr13	protein_coding	DEK proto-oncogene (DNA binding)
chr13	47242091	47252819	-	47242091;47251819	47251631;47252819	ES	0.5	50	50	ENSMUST00000021807.13	ENSMUSG00000021377.16	Dek	chr13	protein_coding	DEK proto-oncogene (DNA binding)
chr13	47242091	47246594	-	47242091	47252819	A5SS	0.33	50	50	ENSMUST00000135278.8	ENSMUSG00000021377.16	Dek	chr13	protein_coding	DEK proto-oncogene (DNA binding)
chr13	47242091	47252819	-	47251819	47252819	3pMXE	0.5	50	50	ENSMUST00000129352.3	ENSMUSG00000021377.16	Dek	chr13	protein_coding	DEK proto-oncogene (DNA binding)
chr13	47347596	47360836	+	47276349	47360836	A5SS	0.5	50	50	ENSMUST00000068891.12	ENSMUSG00000038068.16	Rnf144b	chr13	protein_coding	ring finger protein 144B
chr13	48644872	48651799	-	48644869	48651799	A3SS	0.5	50	50	ENSMUST00000176176.8	ENSMUSG00000050954.16	Zfp169	chr13	protein_coding	zinc finger protein 169
chr13	48660469	48666777	-	48660469	48666771	A5SS	0.33	50	50	ENSMUST00000176176.8	ENSMUSG00000050954.16	Zfp169	chr13	protein_coding	zinc finger protein 169
chr13	48660469	48666863	-	48660469	48666771	A5SS	0.33	50	50	ENSMUST00000176176.8	ENSMUSG00000050954.16	Zfp169	chr13	protein_coding	zinc finger protein 169
chr13	48660469	48666863	-	48660469	48666777	A5SS	0.33	50	50	ENSMUST00000176996.8	ENSMUSG00000050954.16	Zfp169	chr13	protein_coding	zinc finger protein 169
chr13	48746133;48751416	48751234;48759749	-	48746133	48759749	cassetteExon	0.5	100	100	ENSMUST00000035824.11	ENSMUSG00000038042.12	Ptpdc1	chr13	protein_coding	protein tyrosine phosphatase domain containing 1
chr13	48744182	48746029	-	48744182	48745962	A5SS	0.5	50	50	ENSMUST00000035824.11	ENSMUSG00000038042.12	Ptpdc1	chr13	protein_coding	protein tyrosine phosphatase domain containing 1
chr13	48746133	48746563	-	48746133	48759749	A5SS	0.33	50	50	ENSMUST00000035824.11	ENSMUSG00000038042.12	Ptpdc1	chr13	protein_coding	protein tyrosine phosphatase domain containing 1
chr13	48746133	48751234	-	48746133	48746563	5pMXE	0.33	50	50	ENSMUST00000238995.2	ENSMUSG00000038042.12	Ptpdc1	chr13	protein_coding	protein tyrosine phosphatase domain containing 1
chr13	49225516	49229613	-	49225516;49226271	49225978;49229613	ES	0.5	50	50	ENSMUST00000162581.8	ENSMUSG00000037989.16	Wnk2	chr13	protein_coding	WNK lysine deficient protein kinase 2
chr13	49191608	49192568	-	49189981	49192568	A3SS	0.5	50	50	ENSMUST00000162581.8	ENSMUSG00000037989.16	Wnk2	chr13	protein_coding	WNK lysine deficient protein kinase 2
chr13	49205003	49206035	-	49197894	49206035	A3SS	0.5	50	50	ENSMUST00000162581.8	ENSMUSG00000037989.16	Wnk2	chr13	protein_coding	WNK lysine deficient protein kinase 2
chr13	49211173	49213827	-	49211176	49213827	A3SS	0.5	50	50	ENSMUST00000162581.8	ENSMUSG00000037989.16	Wnk2	chr13	protein_coding	WNK lysine deficient protein kinase 2
chr13	49231690	49232147	-	49231726	49232147	A3SS	0.5	50	50	ENSMUST00000162581.8	ENSMUSG00000037989.16	Wnk2	chr13	protein_coding	WNK lysine deficient protein kinase 2
chr13	49197894	49203960	-	49197894	49206035	A5SS	0.5	50	50	ENSMUST00000162581.8	ENSMUSG00000037989.16	Wnk2	chr13	protein_coding	WNK lysine deficient protein kinase 2
chr13	49221438	49221575	-	49221438	49221549	A5SS	0.5	50	50	ENSMUST00000162581.8	ENSMUSG00000037989.16	Wnk2	chr13	protein_coding	WNK lysine deficient protein kinase 2
chr13	49230140	49231438	-	49230140	49231535	A5SS	0.5	50	50	ENSMUST00000162581.8	ENSMUSG00000037989.16	Wnk2	chr13	protein_coding	WNK lysine deficient protein kinase 2
chr13	49196360	49197850	-	49196342	49197850	A3SS	0.5	50	50	ENSMUST00000110097.9	ENSMUSG00000037989.16	Wnk2	chr13	protein_coding	WNK lysine deficient protein kinase 2
chr13	49196342;49197894	49197850;49206035	-	49196342;49205003	49204833;49206035	MXE	0.5	100	100	ENSMUST00000049265.15	ENSMUSG00000037989.16	Wnk2	chr13	protein_coding	WNK lysine deficient protein kinase 2
chr13	49204058	49204833	-	49196342	49204833	A3SS	0.5	50	50	ENSMUST00000049265.15	ENSMUSG00000037989.16	Wnk2	chr13	protein_coding	WNK lysine deficient protein kinase 2
chr13	49341113;49344734	49344561;49347212	+	49341113	49347212	cassetteExon	0.5	100	100	ENSMUST00000049022.15	ENSMUSG00000037966.16	Ninj1	chr13	protein_coding	ninjurin 1
chr13	49347440	49348315	+	49347440	49348370	A3SS	0.5	50	50	ENSMUST00000049022.15	ENSMUSG00000037966.16	Ninj1	chr13	protein_coding	ninjurin 1
chr13	49341332	49347212	+	49341113	49347212	A5SS	0.25	50	50	ENSMUST00000049022.15	ENSMUSG00000037966.16	Ninj1	chr13	protein_coding	ninjurin 1
chr13	49343835	49347212	+	49341113	49347212	A5SS	0.25	50	50	ENSMUST00000049022.15	ENSMUSG00000037966.16	Ninj1	chr13	protein_coding	ninjurin 1
chr13	49341332	49347212	+	49344734	49347212	A5SS&ES	0.25	50	50	ENSMUST00000120733.8	ENSMUSG00000037966.16	Ninj1	chr13	protein_coding	ninjurin 1
chr13	49343835	49347212	+	49344734	49347212	A5SS&ES	0.25	50	50	ENSMUST00000120733.8	ENSMUSG00000037966.16	Ninj1	chr13	protein_coding	ninjurin 1
chr13	49343835	49347212	+	49341332	49347212	A5SS	0.25	50	50	ENSMUST00000150555.8	ENSMUSG00000037966.16	Ninj1	chr13	protein_coding	ninjurin 1
chr13	49361622	49369230	-	49361622;49363679	49363565;49369230	ES	0.5	50	50	ENSMUST00000221443.2	ENSMUSG00000037960.12	Card19	chr13	protein_coding	caspase recruitment domain family, member 19
chr13	49363679	49369413	-	49363679	49369230	5pMXE	0.5	50	50	ENSMUST00000221443.2	ENSMUSG00000037960.12	Card19	chr13	protein_coding	caspase recruitment domain family, member 19
chr13	49361622;49363679	49363565;49369413	-	49361622	49369413	cassetteExon	0.5	100	100	ENSMUST00000048946.7	ENSMUSG00000037960.12	Card19	chr13	protein_coding	caspase recruitment domain family, member 19
chr13	49361622	49369230	-	49361622	49369413	A5SS	0.33	50	50	ENSMUST00000048946.7	ENSMUSG00000037960.12	Card19	chr13	protein_coding	caspase recruitment domain family, member 19
chr13	49361622	49369230	-	49361622	49363565	A5SS&ES	0.33	50	50	ENSMUST00000222733.2	ENSMUSG00000037960.12	Card19	chr13	protein_coding	caspase recruitment domain family, member 19
chr13	49394147	49401895	-	49394147	49401521	5pMXE	0.33	50	50	ENSMUST00000058196.13	ENSMUSG00000021384.15	Susd3	chr13	protein_coding	sushi domain containing 3
chr13	49391378	49392265	-	49391088	49392265	A3SS	0.5	50	50	ENSMUST00000058196.13	ENSMUSG00000021384.15	Susd3	chr13	protein_coding	sushi domain containing 3
chr13	49394147	49396266	-	49394147	49401521	A5SS	0.33	50	50	ENSMUST00000058196.13	ENSMUSG00000021384.15	Susd3	chr13	protein_coding	sushi domain containing 3
chr13	49392412	49401895	-	49392412;49394147	49393959;49401895	ES	0.5	50	50	ENSMUST00000021816.12	ENSMUSG00000021384.15	Susd3	chr13	protein_coding	sushi domain containing 3
chr13	49394147	49396266	-	49394147	49401895	A5SS	0.33	50	50	ENSMUST00000021816.12	ENSMUSG00000021384.15	Susd3	chr13	protein_coding	sushi domain containing 3
chr13	49392412	49401895	-	49392412	49393959	5pMXE	0.5	50	50	ENSMUST00000141408.2	ENSMUSG00000021384.15	Susd3	chr13	protein_coding	sushi domain containing 3
chr13	49451538	49469859	-	49451538	49462657	5pMXE	0.33	50	50	ENSMUST00000110087.9	ENSMUSG00000037946.12	Fgd3	chr13	protein_coding	FYVE, RhoGEF and PH domain containing 3
chr13	49451538	49452060	-	49451538	49462657	A5SS	0.33	50	50	ENSMUST00000110087.9	ENSMUSG00000037946.12	Fgd3	chr13	protein_coding	FYVE, RhoGEF and PH domain containing 3
chr13	49451538	49469859	-	49451538	49452060	5pMXE	0.33	50	50	ENSMUST00000048716.11	ENSMUSG00000037946.12	Fgd3	chr13	protein_coding	FYVE, RhoGEF and PH domain containing 3
chr13	49536729;49537901	49537814;49538447	+	49536729	49538447	cassetteExon	0.5	100	100	ENSMUST00000110084.4	ENSMUSG00000037933.17	Bicd2	chr13	protein_coding	BICD cargo adaptor 2
chr13	49574942;49576502	49576418;49584345	+	49574942	49584345	cassetteExon	0.5	100	100	ENSMUST00000220447.2	ENSMUSG00000021385.11	Ippk	chr13	protein_coding	inositol 1,3,4,5,6-pentakisphosphate 2-kinase
chr13	49575414	49584345	+	49574942	49584345	A5SS	0.33	50	50	ENSMUST00000220447.2	ENSMUSG00000021385.11	Ippk	chr13	protein_coding	inositol 1,3,4,5,6-pentakisphosphate 2-kinase
chr13	49575414	49584345	+	49576502	49584345	A5SS&ES	0.33	50	50	ENSMUST00000220856.2	ENSMUSG00000021385.11	Ippk	chr13	protein_coding	inositol 1,3,4,5,6-pentakisphosphate 2-kinase
chr13	49713790	49780731	-	49619234	49780731	A3SS	0.5	50	50	ENSMUST00000021818.9	ENSMUSG00000021391.11	Cenpp	chr13	protein_coding	centromere protein P
chr13	49698193	49705117	+	49698193	49705134	A3SS	0.5	50	50	ENSMUST00000177948.2	ENSMUSG00000021388.15	Aspn	chr13	protein_coding	asporin
chr13	49736289	49742938	+	49736289;49741285	49741110;49742938	ES	0.5	50	50	ENSMUST00000221170.2	ENSMUSG00000048368.10	Omd	chr13	protein_coding	osteomodulin
chr13	49807158	49807827	+	49807158	49807823	A3SS	0.5	50	50	ENSMUST00000222197.2	ENSMUSG00000021392.9	Nol8	chr13	protein_coding	nucleolar protein 8
chr13	49806607	49807823	+	49807158	49807823	A5SS	0.25	50	50	ENSMUST00000222197.2	ENSMUSG00000021392.9	Nol8	chr13	protein_coding	nucleolar protein 8
chr13	49806873	49807823	+	49807158	49807823	A5SS	0.25	50	50	ENSMUST00000222197.2	ENSMUSG00000021392.9	Nol8	chr13	protein_coding	nucleolar protein 8
chr13	49807339	49807823	+	49807158	49807823	A5SS	0.25	50	50	ENSMUST00000222197.2	ENSMUSG00000021392.9	Nol8	chr13	protein_coding	nucleolar protein 8
chr13	49806873	49807823	+	49806607	49807823	A5SS	0.25	50	50	ENSMUST00000221083.2	ENSMUSG00000021392.9	Nol8	chr13	protein_coding	nucleolar protein 8
chr13	49807339	49807823	+	49806607	49807823	A5SS	0.25	50	50	ENSMUST00000221083.2	ENSMUSG00000021392.9	Nol8	chr13	protein_coding	nucleolar protein 8
chr13	49806873	49807823	+	49807339	49807823	A5SS	0.25	50	50	ENSMUST00000223467.2	ENSMUSG00000021392.9	Nol8	chr13	protein_coding	nucleolar protein 8
chr13	49806873;49807158	49807005;49807823	+	49806873	49807823	cassetteExon	0.5	100	100	ENSMUST00000223264.2	ENSMUSG00000021392.9	Nol8	chr13	protein_coding	nucleolar protein 8
chr13	49806873;49807339	49807005;49807823	+	49806873	49807823	cassetteExon	0.5	100	100	ENSMUST00000223264.2	ENSMUSG00000021392.9	Nol8	chr13	protein_coding	nucleolar protein 8
chr13	49860281	49861886	+	49860281	49861882	A3SS	0.5	50	50	ENSMUST00000165316.8	ENSMUSG00000037851.14	Iars	chr13	protein_coding	isoleucine-tRNA synthetase
chr13	49835784	49840862	+	49835679	49840862	A5SS	0.5	50	50	ENSMUST00000165316.8	ENSMUSG00000037851.14	Iars	chr13	protein_coding	isoleucine-tRNA synthetase
chr13	49942310	49948570	-	49942310	49943512	5pMXE	0.33	50	50	ENSMUST00000220773.2	ENSMUSG00000114073.2	Gm30302	chr13	protein_coding	predicted gene, 30302
chr13	49942310	49952402	-	49942310	49943512	5pMXE	0.33	50	50	ENSMUST00000220773.2	ENSMUSG00000114073.2	Gm30302	chr13	protein_coding	predicted gene, 30302
chr13	49949625	49952402	-	49942310	49952402	A3SS	0.5	50	50	ENSMUST00000223497.2	ENSMUSG00000114073.2	Gm30302	chr13	protein_coding	predicted gene, 30302
chr13	49942310	49948570	-	49942310	49952402	A5SS	0.33	50	50	ENSMUST00000223497.2	ENSMUSG00000114073.2	Gm30302	chr13	protein_coding	predicted gene, 30302
chr13	50124986	50127217	+	50124141	50127217	A5SS	0.5	50	50	ENSMUST00000222996.2	ENSMUSG00000114175.2	Gm48051	chr13	lncRNA	predicted gene, 48051
chr13	50580816;50584623	50584204;50585576	+	50580816	50585576	cassetteExon	0.5	100	100	ENSMUST00000046974.5	ENSMUSG00000037816.11	Fbxw17	chr13	protein_coding	F-box and WD-40 domain protein 17
chr13	50580816	50581258	+	50580816	50585576	A3SS	0.33	50	50	ENSMUST00000046974.5	ENSMUSG00000037816.11	Fbxw17	chr13	protein_coding	F-box and WD-40 domain protein 17
chr13	50585786	50586137	+	50585786	50586207	A3SS	0.33	50	50	ENSMUST00000046974.5	ENSMUSG00000037816.11	Fbxw17	chr13	protein_coding	F-box and WD-40 domain protein 17
chr13	50585786	50586212	+	50585786	50586207	A3SS	0.33	50	50	ENSMUST00000046974.5	ENSMUSG00000037816.11	Fbxw17	chr13	protein_coding	F-box and WD-40 domain protein 17
chr13	50574027	50577238	+	50573913	50577238	A5SS	0.33	50	50	ENSMUST00000046974.5	ENSMUSG00000037816.11	Fbxw17	chr13	protein_coding	F-box and WD-40 domain protein 17
chr13	50574064	50577238	+	50573913	50577238	A5SS	0.33	50	50	ENSMUST00000046974.5	ENSMUSG00000037816.11	Fbxw17	chr13	protein_coding	F-box and WD-40 domain protein 17
chr13	50586297	50586464	+	50586382	50586464	A5SS	0.5	50	50	ENSMUST00000046974.5	ENSMUSG00000037816.11	Fbxw17	chr13	protein_coding	F-box and WD-40 domain protein 17
chr13	50574027	50577238	+	50574064	50577238	A5SS	0.33	50	50	ENSMUST00000176913.8	ENSMUSG00000037816.11	Fbxw17	chr13	protein_coding	F-box and WD-40 domain protein 17
chr13	50580816	50585576	+	50580816	50584204	3pMXE	0.33	50	50	ENSMUST00000176424.8	ENSMUSG00000037816.11	Fbxw17	chr13	protein_coding	F-box and WD-40 domain protein 17
chr13	50580816	50581258	+	50580816	50584204	A3SS	0.33	50	50	ENSMUST00000176424.8	ENSMUSG00000037816.11	Fbxw17	chr13	protein_coding	F-box and WD-40 domain protein 17
chr13	50585786	50586137	+	50585786	50586212	A3SS	0.33	50	50	ENSMUST00000176479.8	ENSMUSG00000037816.11	Fbxw17	chr13	protein_coding	F-box and WD-40 domain protein 17
chr13	50580816	50585576	+	50584623	50585576	5pMXE	0.5	50	50	ENSMUST00000176508.2	ENSMUSG00000037816.11	Fbxw17	chr13	protein_coding	F-box and WD-40 domain protein 17
chr13	50586297	50586437	+	50586297	50586464	A3SS	0.5	50	50	ENSMUST00000176772.2	ENSMUSG00000037816.11	Fbxw17	chr13	protein_coding	F-box and WD-40 domain protein 17
chr13	51288418	51293393	+	51282009	51293393	A5SS	0.5	50	50	ENSMUST00000095797.6	ENSMUSG00000021395.12	Spin1	chr13	protein_coding	spindlin 1
chr13	51585317	51601926	-	51585317;51597021	51596726;51601926	ES	0.5	50	50	ENSMUST00000021898.6	ENSMUSG00000021448.9	Shc3	chr13	protein_coding	src homology 2 domain-containing transforming protein C3
chr13	51806791	51808532	+	51806791	51808422	A3SS	0.33	50	50	ENSMUST00000040117.15	ENSMUSG00000035139.15	Secisbp2	chr13	protein_coding	SECIS binding protein 2
chr13	51806791	51808422	+	51806791	51810917	A3SS	0.33	50	50	ENSMUST00000154202.8	ENSMUSG00000035139.15	Secisbp2	chr13	protein_coding	SECIS binding protein 2
chr13	51806791	51808532	+	51806791	51810917	A3SS	0.33	50	50	ENSMUST00000154202.8	ENSMUSG00000035139.15	Secisbp2	chr13	protein_coding	SECIS binding protein 2
chr13	51809276	51810917	+	51806791	51810917	A5SS	0.5	50	50	ENSMUST00000154202.8	ENSMUSG00000035139.15	Secisbp2	chr13	protein_coding	SECIS binding protein 2
chr13	51857567	51858989	-	51855076	51858989	A3SS	0.5	50	50	ENSMUST00000110042.3	ENSMUSG00000021451.17	Sema4d	chr13	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
chr13	51879578	51917288	-	51879578;51888606	51888543;51917288	ES	0.5	50	50	ENSMUST00000110040.9	ENSMUSG00000021451.17	Sema4d	chr13	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
chr13	51917356;51932658	51932573;51947533	-	51917356	51947533	cassetteExon	0.5	100	100	ENSMUST00000110040.9	ENSMUSG00000021451.17	Sema4d	chr13	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
chr13	51879578	51902717	-	51879578	51888543	A5SS&ES	0.16	50	50	ENSMUST00000110040.9	ENSMUSG00000021451.17	Sema4d	chr13	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
chr13	51879578	51906136	-	51879578	51888543	A5SS&ES	0.16	50	50	ENSMUST00000110040.9	ENSMUSG00000021451.17	Sema4d	chr13	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
chr13	51879578	51908632	-	51879578	51888543	A5SS&ES	0.16	50	50	ENSMUST00000110040.9	ENSMUSG00000021451.17	Sema4d	chr13	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
chr13	51879578	51910593	-	51879578	51888543	A5SS&ES	0.16	50	50	ENSMUST00000110040.9	ENSMUSG00000021451.17	Sema4d	chr13	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
chr13	51888606	51902588	-	51888606	51917288	A5SS	0.25	50	50	ENSMUST00000110040.9	ENSMUSG00000021451.17	Sema4d	chr13	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
chr13	51888606	51902717	-	51888606	51917288	A5SS	0.25	50	50	ENSMUST00000110040.9	ENSMUSG00000021451.17	Sema4d	chr13	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
chr13	51888606	51910593	-	51888606	51917288	A5SS	0.25	50	50	ENSMUST00000110040.9	ENSMUSG00000021451.17	Sema4d	chr13	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
chr13	51917356	51930728	-	51917356	51947533	A5SS	0.33	50	50	ENSMUST00000110040.9	ENSMUSG00000021451.17	Sema4d	chr13	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
chr13	51879578	51902717	-	51879578	51917288	A5SS	0.16	50	50	ENSMUST00000021900.14	ENSMUSG00000021451.17	Sema4d	chr13	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
chr13	51879578	51906136	-	51879578	51917288	A5SS	0.16	50	50	ENSMUST00000021900.14	ENSMUSG00000021451.17	Sema4d	chr13	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
chr13	51879578	51908632	-	51879578	51917288	A5SS	0.16	50	50	ENSMUST00000021900.14	ENSMUSG00000021451.17	Sema4d	chr13	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
chr13	51879578	51910593	-	51879578	51917288	A5SS	0.16	50	50	ENSMUST00000021900.14	ENSMUSG00000021451.17	Sema4d	chr13	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
chr13	51879578	51917288	-	51879578	51888543	5pMXE	0.16	50	50	ENSMUST00000110039.2	ENSMUSG00000021451.17	Sema4d	chr13	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
chr13	51879578	51902717	-	51879578;51888606	51888543;51902717	ES	0.5	50	50	ENSMUST00000138228.8	ENSMUSG00000021451.17	Sema4d	chr13	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
chr13	51888606	51910593	-	51888606	51902717	5pMXE	0.25	50	50	ENSMUST00000138228.8	ENSMUSG00000021451.17	Sema4d	chr13	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
chr13	51888606	51902588	-	51888606	51902717	A5SS	0.25	50	50	ENSMUST00000138228.8	ENSMUSG00000021451.17	Sema4d	chr13	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
chr13	51879578	51906136	-	51879578	51902717	5pMXE	0.16	50	50	ENSMUST00000139865.8	ENSMUSG00000021451.17	Sema4d	chr13	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
chr13	51879578	51908632	-	51879578	51902717	5pMXE	0.16	50	50	ENSMUST00000139865.8	ENSMUSG00000021451.17	Sema4d	chr13	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
chr13	51879578	51910593	-	51879578	51902717	5pMXE	0.16	50	50	ENSMUST00000139865.8	ENSMUSG00000021451.17	Sema4d	chr13	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
chr13	51879578	51908632	-	51879578	51906136	5pMXE	0.16	50	50	ENSMUST00000150662.2	ENSMUSG00000021451.17	Sema4d	chr13	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
chr13	51879578	51910593	-	51879578	51906136	5pMXE	0.16	50	50	ENSMUST00000150662.2	ENSMUSG00000021451.17	Sema4d	chr13	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
chr13	51879578	51910593	-	51879578	51908632	5pMXE	0.16	50	50	ENSMUST00000139018.2	ENSMUSG00000021451.17	Sema4d	chr13	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
chr13	51879578;51888606	51888543;51910593	-	51879578	51910593	cassetteExon	0.5	100	100	ENSMUST00000146238.2	ENSMUSG00000021451.17	Sema4d	chr13	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
chr13	51888606	51902588	-	51888606	51910593	A5SS	0.25	50	50	ENSMUST00000146922.8	ENSMUSG00000021451.17	Sema4d	chr13	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
chr13	51917356	51932573	-	51917356	51930728	5pMXE	0.33	50	50	ENSMUST00000139858.8	ENSMUSG00000021451.17	Sema4d	chr13	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
chr13	52247794	52250621	-	52244482	52250621	A3SS	0.5	50	50	ENSMUST00000220666.2	ENSMUSG00000113090.2	Gm48190	chr13	lncRNA	predicted gene, 48190
chr13	52777312	52785693	+	52777312;52778812	52778744;52785693	ES	0.5	50	50	ENSMUST00000120135.8	ENSMUSG00000021457.15	Syk	chr13	protein_coding	spleen tyrosine kinase
chr13	52737641;52751090	52750994;52764832	+	52737641	52764832	cassetteExon	0.5	100	100	ENSMUST00000120135.8	ENSMUSG00000021457.15	Syk	chr13	protein_coding	spleen tyrosine kinase
chr13	52737641	52764832	+	52751090	52764832	5pMXE	0.5	50	50	ENSMUST00000055087.7	ENSMUSG00000021457.15	Syk	chr13	protein_coding	spleen tyrosine kinase
chr13	52887165	52910992	-	52887165	52889402	5pMXE	0.5	50	50	ENSMUST00000222580.2	ENSMUSG00000113737.2	BB123696	chr13	lncRNA	expressed sequence BB123696
chr13	52989587	52992122	-	52989587;52990201	52990023;52992122	ES	0.5	50	50	ENSMUST00000137064.8	ENSMUSG00000021460.18	Auh	chr13	protein_coding	AU RNA binding protein/enoyl-coenzyme A hydratase
chr13	53051168	53052686	-	53043231	53052686	A3SS	0.5	50	50	ENSMUST00000137064.8	ENSMUSG00000021460.18	Auh	chr13	protein_coding	AU RNA binding protein/enoyl-coenzyme A hydratase
chr13	53063351	53073037	-	53052772	53073037	A3SS	0.25	50	50	ENSMUST00000137064.8	ENSMUSG00000021460.18	Auh	chr13	protein_coding	AU RNA binding protein/enoyl-coenzyme A hydratase
chr13	53063393	53073037	-	53052772	53073037	A3SS	0.25	50	50	ENSMUST00000137064.8	ENSMUSG00000021460.18	Auh	chr13	protein_coding	AU RNA binding protein/enoyl-coenzyme A hydratase
chr13	53067097	53073037	-	53052772	53073037	A3SS	0.25	50	50	ENSMUST00000137064.8	ENSMUSG00000021460.18	Auh	chr13	protein_coding	AU RNA binding protein/enoyl-coenzyme A hydratase
chr13	53082975	53083491	-	53073302	53083491	A3SS	0.5	50	50	ENSMUST00000021913.16	ENSMUSG00000021460.18	Auh	chr13	protein_coding	AU RNA binding protein/enoyl-coenzyme A hydratase
chr13	53073302	53077782	-	53073302	53083491	A5SS	0.33	50	50	ENSMUST00000021913.16	ENSMUSG00000021460.18	Auh	chr13	protein_coding	AU RNA binding protein/enoyl-coenzyme A hydratase
chr13	53073302	53083425	-	53073302	53083491	A5SS	0.33	50	50	ENSMUST00000021913.16	ENSMUSG00000021460.18	Auh	chr13	protein_coding	AU RNA binding protein/enoyl-coenzyme A hydratase
chr13	53073302	53077782	-	53073302	53083425	A5SS	0.33	50	50	ENSMUST00000123599.8	ENSMUSG00000021460.18	Auh	chr13	protein_coding	AU RNA binding protein/enoyl-coenzyme A hydratase
chr13	53063393	53073037	-	53063351	53073037	A3SS	0.25	50	50	ENSMUST00000119311.8	ENSMUSG00000021460.18	Auh	chr13	protein_coding	AU RNA binding protein/enoyl-coenzyme A hydratase
chr13	53067097	53073037	-	53063351	53073037	A3SS	0.25	50	50	ENSMUST00000119311.8	ENSMUSG00000021460.18	Auh	chr13	protein_coding	AU RNA binding protein/enoyl-coenzyme A hydratase
chr13	53067097	53073037	-	53063393	53073037	A3SS	0.25	50	50	ENSMUST00000128544.8	ENSMUSG00000021460.18	Auh	chr13	protein_coding	AU RNA binding protein/enoyl-coenzyme A hydratase
chr13	53300747	53439817	-	53300747	53439502	5pMXE	0.33	50	50	ENSMUST00000130235.9	ENSMUSG00000021464.16	Ror2	chr13	protein_coding	receptor tyrosine kinase-like orphan receptor 2
chr13	53300747	53429527	-	53300747	53439502	A5SS	0.33	50	50	ENSMUST00000130235.9	ENSMUSG00000021464.16	Ror2	chr13	protein_coding	receptor tyrosine kinase-like orphan receptor 2
chr13	53300747	53429527	-	53300747	53439817	A5SS	0.33	50	50	ENSMUST00000021918.10	ENSMUSG00000021464.16	Ror2	chr13	protein_coding	receptor tyrosine kinase-like orphan receptor 2
chr13	53523429	53527365	-	53521995	53527365	A3SS	0.5	50	50	ENSMUST00000021920.8	ENSMUSG00000021468.9	Sptlc1	chr13	protein_coding	serine palmitoyltransferase, long chain base subunit 1
chr13	53549431	53551935	+	53549431;53549821	53549754;53551935	ES	0.33	50	50	ENSMUST00000202976.4	ENSMUSG00000107008.4	Gm2762	chr13	lncRNA	predicted gene 2762
chr13	53549431;53551687	53551628;53551935	+	53549431;53549821	53549754;53551935	MXE	0.5	100	100	ENSMUST00000202976.4	ENSMUSG00000107008.4	Gm2762	chr13	lncRNA	predicted gene 2762
chr13	53547766	53548292	+	53547766	53548182	A3SS	0.33	50	50	ENSMUST00000202976.4	ENSMUSG00000107008.4	Gm2762	chr13	lncRNA	predicted gene 2762
chr13	53547766	53548327	+	53547766	53548182	A3SS	0.33	50	50	ENSMUST00000202976.4	ENSMUSG00000107008.4	Gm2762	chr13	lncRNA	predicted gene 2762
chr13	53549431;53551687	53551628;53551935	+	53549431	53551935	cassetteExon	0.5	100	100	ENSMUST00000201658.4	ENSMUSG00000107008.4	Gm2762	chr13	lncRNA	predicted gene 2762
chr13	53547766	53548292	+	53547766	53548327	A3SS	0.33	50	50	ENSMUST00000201658.4	ENSMUSG00000107008.4	Gm2762	chr13	lncRNA	predicted gene 2762
chr13	53552069	53556307	+	53552069	53586482	A3SS	0.5	50	50	ENSMUST00000201658.4	ENSMUSG00000107008.4	Gm2762	chr13	lncRNA	predicted gene 2762
chr13	54208632	54208748	-	54208632	54209580	A5SS	0.5	50	50	ENSMUST00000221470.2	ENSMUSG00000021478.7	Drd1	chr13	protein_coding	dopamine receptor D1
chr13	54369098	54376896	+	54369098	54375239	3pMXE	0.33	50	50	ENSMUST00000038101.4	ENSMUSG00000034987.5	Hrh2	chr13	protein_coding	histamine receptor H2
chr13	54369098	54387199	+	54369098	54375239	3pMXE	0.33	50	50	ENSMUST00000038101.4	ENSMUSG00000034987.5	Hrh2	chr13	protein_coding	histamine receptor H2
chr13	54369098;54377040	54376896;54387199	+	54369098	54387199	cassetteExon	0.5	100	100	ENSMUST00000209846.2	ENSMUSG00000034987.5	Hrh2	chr13	protein_coding	histamine receptor H2
chr13	54456867	54466044	+	54456423	54466044	A5SS	0.5	50	50	ENSMUST00000221369.2	ENSMUSG00000112941.2	Gm48623	chr13	lncRNA	predicted gene, 48623
chr13	54614268	54615639	-	54614197	54615639	A3SS	0.5	50	50	ENSMUST00000026990.6	ENSMUSG00000025872.6	Thoc3	chr13	protein_coding	THO complex 3
chr13	54651817	54676117	+	54651817;54674485	54671783;54676117	ES	0.5	50	50	ENSMUST00000121401.8	ENSMUSG00000043183.19	Simc1	chr13	protein_coding	SUMO-interacting motifs containing 1
chr13	54660285	54671783	+	54651817	54671783	A5SS	0.5	50	50	ENSMUST00000121401.8	ENSMUSG00000043183.19	Simc1	chr13	protein_coding	SUMO-interacting motifs containing 1
chr13	54651817	54676967	+	54651817;54676349	54676117;54676967	ES	0.5	50	50	ENSMUST00000118072.8	ENSMUSG00000043183.19	Simc1	chr13	protein_coding	SUMO-interacting motifs containing 1
chr13	54651817	54671783	+	54651817	54676117	A3SS	0.25	50	50	ENSMUST00000118072.8	ENSMUSG00000043183.19	Simc1	chr13	protein_coding	SUMO-interacting motifs containing 1
chr13	54674485	54676117	+	54651817	54676117	A5SS	0.5	50	50	ENSMUST00000118072.8	ENSMUSG00000043183.19	Simc1	chr13	protein_coding	SUMO-interacting motifs containing 1
chr13	54651817;54677036	54676967;54684895	+	54651817	54684895	cassetteExon	0.5	100	100	ENSMUST00000159721.2	ENSMUSG00000043183.19	Simc1	chr13	protein_coding	SUMO-interacting motifs containing 1
chr13	54651817	54671783	+	54651817	54684895	A3SS	0.25	50	50	ENSMUST00000159721.2	ENSMUSG00000043183.19	Simc1	chr13	protein_coding	SUMO-interacting motifs containing 1
chr13	54651817	54676117	+	54651817	54684895	A3SS	0.25	50	50	ENSMUST00000159721.2	ENSMUSG00000043183.19	Simc1	chr13	protein_coding	SUMO-interacting motifs containing 1
chr13	54651817	54671783	+	54651817	54676967	A3SS	0.25	50	50	ENSMUST00000138869.2	ENSMUSG00000043183.19	Simc1	chr13	protein_coding	SUMO-interacting motifs containing 1
chr13	54651817	54684895	+	54677036	54684895	5pMXE	0.5	50	50	ENSMUST00000150011.2	ENSMUSG00000043183.19	Simc1	chr13	protein_coding	SUMO-interacting motifs containing 1
chr13	54709684	54712328	-	54709684;54712085	54711998;54712328	ES	0.5	50	50	ENSMUST00000026989.15	ENSMUSG00000025871.19	4833439L19Rik	chr13	protein_coding	RIKEN cDNA 4833439L19 gene
chr13	54712085	54712995	-	54712085;54712434	54712328;54712995	ES	0.25	50	50	ENSMUST00000026989.15	ENSMUSG00000025871.19	4833439L19Rik	chr13	protein_coding	RIKEN cDNA 4833439L19 gene
chr13	54709684	54712323	-	54709684	54711998	A5SS&ES	0.25	50	50	ENSMUST00000026989.15	ENSMUSG00000025871.19	4833439L19Rik	chr13	protein_coding	RIKEN cDNA 4833439L19 gene
chr13	54712085	54712323	-	54712085	54712328	A5SS	0.33	50	50	ENSMUST00000026989.15	ENSMUSG00000025871.19	4833439L19Rik	chr13	protein_coding	RIKEN cDNA 4833439L19 gene
chr13	54709684	54712995	-	54709684;54712434	54712328;54712995	ES	0.25	50	50	ENSMUST00000153065.8	ENSMUSG00000025871.19	4833439L19Rik	chr13	protein_coding	RIKEN cDNA 4833439L19 gene
chr13	54709684;54712085	54711998;54712995	-	54709684;54712434	54712328;54712995	MXE	0.5	100	100	ENSMUST00000153065.8	ENSMUSG00000025871.19	4833439L19Rik	chr13	protein_coding	RIKEN cDNA 4833439L19 gene
chr13	54709684	54712323	-	54709684	54712328	A5SS	0.25	50	50	ENSMUST00000153065.8	ENSMUSG00000025871.19	4833439L19Rik	chr13	protein_coding	RIKEN cDNA 4833439L19 gene
chr13	54709684	54712995	-	54704464	54712995	A3SS	0.25	50	50	ENSMUST00000153708.2	ENSMUSG00000025871.19	4833439L19Rik	chr13	protein_coding	RIKEN cDNA 4833439L19 gene
chr13	54712085	54712995	-	54704464	54712995	A3SS	0.25	50	50	ENSMUST00000153708.2	ENSMUSG00000025871.19	4833439L19Rik	chr13	protein_coding	RIKEN cDNA 4833439L19 gene
chr13	54712434	54712995	-	54704464	54712995	A3SS	0.25	50	50	ENSMUST00000153708.2	ENSMUSG00000025871.19	4833439L19Rik	chr13	protein_coding	RIKEN cDNA 4833439L19 gene
chr13	54704464	54707011	-	54704464	54712995	A5SS	0.5	50	50	ENSMUST00000153708.2	ENSMUSG00000025871.19	4833439L19Rik	chr13	protein_coding	RIKEN cDNA 4833439L19 gene
chr13	54709684;54712085	54711998;54712995	-	54709684	54712995	cassetteExon	0.5	100	100	ENSMUST00000143173.8	ENSMUSG00000025871.19	4833439L19Rik	chr13	protein_coding	RIKEN cDNA 4833439L19 gene
chr13	54709684;54712434	54711998;54712995	-	54709684	54712995	cassetteExon	0.5	100	100	ENSMUST00000143173.8	ENSMUSG00000025871.19	4833439L19Rik	chr13	protein_coding	RIKEN cDNA 4833439L19 gene
chr13	54709684;54712434	54712323;54712995	-	54709684	54712995	cassetteExon	0.5	100	100	ENSMUST00000143173.8	ENSMUSG00000025871.19	4833439L19Rik	chr13	protein_coding	RIKEN cDNA 4833439L19 gene
chr13	54709684	54712323	-	54709684;54712085	54711998;54712323	ES	0.5	50	50	ENSMUST00000143144.8	ENSMUSG00000025871.19	4833439L19Rik	chr13	protein_coding	RIKEN cDNA 4833439L19 gene
chr13	54712085	54712995	-	54712085;54712434	54712323;54712995	ES	0.25	50	50	ENSMUST00000143144.8	ENSMUSG00000025871.19	4833439L19Rik	chr13	protein_coding	RIKEN cDNA 4833439L19 gene
chr13	54709684	54712328	-	54709684	54711998	A5SS&ES	0.25	50	50	ENSMUST00000143144.8	ENSMUSG00000025871.19	4833439L19Rik	chr13	protein_coding	RIKEN cDNA 4833439L19 gene
chr13	54709684;54712434	54712323;54712995	-	54709684;54712085	54711998;54712995	MXE	0.5	100	100	ENSMUST00000132136.3	ENSMUSG00000025871.19	4833439L19Rik	chr13	protein_coding	RIKEN cDNA 4833439L19 gene
chr13	54726781	54726952	+	54726781	54728534	A3SS	0.5	50	50	ENSMUST00000026988.11	ENSMUSG00000025870.11	Arl10	chr13	protein_coding	ADP-ribosylation factor-like 10
chr13	54726429	54726606	+	54723761	54726606	A5SS	0.5	50	50	ENSMUST00000026988.11	ENSMUSG00000025870.11	Arl10	chr13	protein_coding	ADP-ribosylation factor-like 10
chr13	54741855;54744892	54744839;54746535	-	54741855	54746535	cassetteExon	0.5	100	100	ENSMUST00000091609.11	ENSMUSG00000047547.15	Cltb	chr13	protein_coding	clathrin, light polypeptide (Lcb)
chr13	54741704	54746535	-	54741855	54746535	A3SS	0.33	50	50	ENSMUST00000091609.11	ENSMUSG00000047547.15	Cltb	chr13	protein_coding	clathrin, light polypeptide (Lcb)
chr13	54744892	54746535	-	54741704	54746535	A3SS	0.33	50	50	ENSMUST00000140142.8	ENSMUSG00000047547.15	Cltb	chr13	protein_coding	clathrin, light polypeptide (Lcb)
chr13	54793134	54797791	+	54793134;54796243	54796105;54797791	ES	0.33	50	50	ENSMUST00000126071.9	ENSMUSG00000025873.17	Faf2	chr13	protein_coding	Fas associated factor family member 2
chr13	54769716;54777277	54777203;54786063	+	54769716	54786063	cassetteExon	0.5	100	100	ENSMUST00000126071.9	ENSMUSG00000025873.17	Faf2	chr13	protein_coding	Fas associated factor family member 2
chr13	54769796	54786063	+	54769716	54786063	A5SS	0.33	50	50	ENSMUST00000126071.9	ENSMUSG00000025873.17	Faf2	chr13	protein_coding	Fas associated factor family member 2
chr13	54789309	54793058	+	54789366	54793058	A5SS	0.5	50	50	ENSMUST00000126071.9	ENSMUSG00000025873.17	Faf2	chr13	protein_coding	Fas associated factor family member 2
chr13	54777277	54786063	+	54769796	54786063	A5SS	0.33	50	50	ENSMUST00000135015.2	ENSMUSG00000025873.17	Faf2	chr13	protein_coding	Fas associated factor family member 2
chr13	54789366	54797791	+	54796243	54797791	A5SS&ES	0.33	50	50	ENSMUST00000026991.16	ENSMUSG00000025873.17	Faf2	chr13	protein_coding	Fas associated factor family member 2
chr13	54793134	54797791	+	54793134	54796105	3pMXE	0.5	50	50	ENSMUST00000137413.8	ENSMUSG00000025873.17	Faf2	chr13	protein_coding	Fas associated factor family member 2
chr13	54789366;54793134	54793058;54797791	+	54789366	54797791	cassetteExon	0.5	100	100	ENSMUST00000124752.2	ENSMUSG00000025873.17	Faf2	chr13	protein_coding	Fas associated factor family member 2
chr13	54832301	54835844	-	54832301	54835307	5pMXE	0.2	50	50	ENSMUST00000177950.8	ENSMUSG00000034928.17	Rnf44	chr13	protein_coding	ring finger protein 44
chr13	54832301	54835985	-	54832301	54835307	5pMXE	0.2	50	50	ENSMUST00000177950.8	ENSMUSG00000034928.17	Rnf44	chr13	protein_coding	ring finger protein 44
chr13	54832301	54841542	-	54832301	54835307	5pMXE	0.2	50	50	ENSMUST00000177950.8	ENSMUSG00000034928.17	Rnf44	chr13	protein_coding	ring finger protein 44
chr13	54831032	54831408	-	54831029	54831408	A3SS	0.5	50	50	ENSMUST00000177950.8	ENSMUSG00000034928.17	Rnf44	chr13	protein_coding	ring finger protein 44
chr13	54831888	54832151	-	54831899	54832151	A3SS	0.25	50	50	ENSMUST00000177950.8	ENSMUSG00000034928.17	Rnf44	chr13	protein_coding	ring finger protein 44
chr13	54831902	54832151	-	54831899	54832151	A3SS	0.25	50	50	ENSMUST00000177950.8	ENSMUSG00000034928.17	Rnf44	chr13	protein_coding	ring finger protein 44
chr13	54831963	54832151	-	54831899	54832151	A3SS	0.25	50	50	ENSMUST00000177950.8	ENSMUSG00000034928.17	Rnf44	chr13	protein_coding	ring finger protein 44
chr13	54832301	54834902	-	54832301	54835307	A5SS	0.2	50	50	ENSMUST00000177950.8	ENSMUSG00000034928.17	Rnf44	chr13	protein_coding	ring finger protein 44
chr13	54831888	54832151	-	54831963	54832151	A3SS	0.25	50	50	ENSMUST00000125871.8	ENSMUSG00000034928.17	Rnf44	chr13	protein_coding	ring finger protein 44
chr13	54831902	54832151	-	54831963	54832151	A3SS	0.25	50	50	ENSMUST00000125871.8	ENSMUSG00000034928.17	Rnf44	chr13	protein_coding	ring finger protein 44
chr13	54832301	54834902	-	54832301	54841542	A5SS	0.2	50	50	ENSMUST00000037422.16	ENSMUSG00000034928.17	Rnf44	chr13	protein_coding	ring finger protein 44
chr13	54832301	54835844	-	54832301	54841542	A5SS	0.2	50	50	ENSMUST00000037422.16	ENSMUSG00000034928.17	Rnf44	chr13	protein_coding	ring finger protein 44
chr13	54832301	54835985	-	54832301	54841542	A5SS	0.2	50	50	ENSMUST00000037422.16	ENSMUSG00000034928.17	Rnf44	chr13	protein_coding	ring finger protein 44
chr13	54832301	54834902	-	54832301	54835844	A5SS	0.2	50	50	ENSMUST00000150806.8	ENSMUSG00000034928.17	Rnf44	chr13	protein_coding	ring finger protein 44
chr13	54832301	54835985	-	54832301	54835844	A5SS	0.2	50	50	ENSMUST00000150806.8	ENSMUSG00000034928.17	Rnf44	chr13	protein_coding	ring finger protein 44
chr13	54831888	54832151	-	54831902	54832151	A3SS	0.25	50	50	ENSMUST00000129881.8	ENSMUSG00000034928.17	Rnf44	chr13	protein_coding	ring finger protein 44
chr13	54832301	54834902	-	54832301	54835985	A5SS	0.2	50	50	ENSMUST00000122935.2	ENSMUSG00000034928.17	Rnf44	chr13	protein_coding	ring finger protein 44
chr13	54888426;54889921	54889822;54897383	-	54888426	54897383	cassetteExon	0.5	100	100	ENSMUST00000135343.2	ENSMUSG00000069227.5	Gprin1	chr13	protein_coding	G protein-regulated inducer of neurite outgrowth 1
chr13	54913505	54913728	-	54913505	54914118	A5SS	0.5	50	50	ENSMUST00000036825.14	ENSMUSG00000034891.14	Sncb	chr13	protein_coding	synuclein, beta
chr13	54932717	54934432	+	54932717;54933354	54933291;54934432	ES	0.5	50	50	ENSMUST00000142158.8	ENSMUSG00000074895.11	Eif4e1b	chr13	protein_coding	eukaryotic translation initiation factor 4E family member 1B
chr13	54934545	54934692	+	54934545	54934662	A3SS	0.33	50	50	ENSMUST00000142158.8	ENSMUSG00000074895.11	Eif4e1b	chr13	protein_coding	eukaryotic translation initiation factor 4E family member 1B
chr13	54934545	54934700	+	54934545	54934662	A3SS	0.33	50	50	ENSMUST00000142158.8	ENSMUSG00000074895.11	Eif4e1b	chr13	protein_coding	eukaryotic translation initiation factor 4E family member 1B
chr13	54931846	54932167	+	54931843	54932167	A5SS	0.33	50	50	ENSMUST00000142158.8	ENSMUSG00000074895.11	Eif4e1b	chr13	protein_coding	eukaryotic translation initiation factor 4E family member 1B
chr13	54931914	54932167	+	54931843	54932167	A5SS	0.33	50	50	ENSMUST00000142158.8	ENSMUSG00000074895.11	Eif4e1b	chr13	protein_coding	eukaryotic translation initiation factor 4E family member 1B
chr13	54932114	54932622	+	54932375	54932622	A5SS&ES	0.5	50	50	ENSMUST00000142158.8	ENSMUSG00000074895.11	Eif4e1b	chr13	protein_coding	eukaryotic translation initiation factor 4E family member 1B
chr13	54932818	54933291	+	54932717	54933291	A5SS	0.5	50	50	ENSMUST00000142158.8	ENSMUSG00000074895.11	Eif4e1b	chr13	protein_coding	eukaryotic translation initiation factor 4E family member 1B
chr13	54931914	54932167	+	54931914	54932004	A3SS	0.5	50	50	ENSMUST00000139184.8	ENSMUSG00000074895.11	Eif4e1b	chr13	protein_coding	eukaryotic translation initiation factor 4E family member 1B
chr13	54931846	54932004	+	54931914	54932004	A5SS	0.5	50	50	ENSMUST00000139184.8	ENSMUSG00000074895.11	Eif4e1b	chr13	protein_coding	eukaryotic translation initiation factor 4E family member 1B
chr13	54931914;54932375	54932167;54932622	+	54931914;54932114	54932004;54932622	MXE	0.5	100	100	ENSMUST00000132415.8	ENSMUSG00000074895.11	Eif4e1b	chr13	protein_coding	eukaryotic translation initiation factor 4E family member 1B
chr13	54934545	54934692	+	54934545	54934700	A3SS	0.33	50	50	ENSMUST00000132005.8	ENSMUSG00000074895.11	Eif4e1b	chr13	protein_coding	eukaryotic translation initiation factor 4E family member 1B
chr13	54931846;54932114	54932004;54932622	+	54931846;54932375	54932167;54932622	MXE	0.5	100	100	ENSMUST00000126785.8	ENSMUSG00000074895.11	Eif4e1b	chr13	protein_coding	eukaryotic translation initiation factor 4E family member 1B
chr13	54931914	54932167	+	54931846	54932167	A5SS	0.33	50	50	ENSMUST00000126785.8	ENSMUSG00000074895.11	Eif4e1b	chr13	protein_coding	eukaryotic translation initiation factor 4E family member 1B
chr13	54932717	54934432	+	54933354	54934432	A5SS&ES	0.5	50	50	ENSMUST00000141398.2	ENSMUSG00000074895.11	Eif4e1b	chr13	protein_coding	eukaryotic translation initiation factor 4E family member 1B
chr13	54941178	54943224	+	54941178;54942991	54942866;54943224	ES	0.5	50	50	ENSMUST00000026993.14	ENSMUSG00000025875.15	Tspan17	chr13	protein_coding	tetraspanin 17
chr13	54940699	54941077	+	54940699	54941008	A3SS	0.5	50	50	ENSMUST00000026993.14	ENSMUSG00000025875.15	Tspan17	chr13	protein_coding	tetraspanin 17
chr13	54942991	54943228	+	54942991	54943224	A3SS	0.5	50	50	ENSMUST00000026993.14	ENSMUSG00000025875.15	Tspan17	chr13	protein_coding	tetraspanin 17
chr13	54943280	54943779	+	54943271	54943779	A5SS	0.5	50	50	ENSMUST00000026993.14	ENSMUSG00000025875.15	Tspan17	chr13	protein_coding	tetraspanin 17
chr13	54944031	54944411	+	54944031	54944535	A3SS	0.5	50	50	ENSMUST00000131692.9	ENSMUSG00000025875.15	Tspan17	chr13	protein_coding	tetraspanin 17
chr13	54937494;54940699	54940422;54941008	+	54937494	54941008	cassetteExon	0.5	100	100	ENSMUST00000163796.8	ENSMUSG00000025875.15	Tspan17	chr13	protein_coding	tetraspanin 17
chr13	54941178	54943224	+	54941178	54942866	3pMXE	0.5	50	50	ENSMUST00000171859.8	ENSMUSG00000025875.15	Tspan17	chr13	protein_coding	tetraspanin 17
chr13	54937494	54941008	+	54937494	54940422	A3SS&ES	0.5	50	50	ENSMUST00000171859.8	ENSMUSG00000025875.15	Tspan17	chr13	protein_coding	tetraspanin 17
chr13	54937494	54941008	+	54940699	54941008	5pMXE	0.5	50	50	ENSMUST00000130568.9	ENSMUSG00000025875.15	Tspan17	chr13	protein_coding	tetraspanin 17
chr13	55144397	55145729	+	55144397;55145173	55145006;55145729	ES	0.5	50	50	ENSMUST00000026994.14	ENSMUSG00000025876.16	Unc5a	chr13	protein_coding	unc-5 netrin receptor A
chr13	55152469	55153063	+	55152469	55152619	A3SS	0.5	50	50	ENSMUST00000026994.14	ENSMUSG00000025876.16	Unc5a	chr13	protein_coding	unc-5 netrin receptor A
chr13	55145830	55147149	+	55145893	55147149	A5SS	0.5	50	50	ENSMUST00000026994.14	ENSMUSG00000025876.16	Unc5a	chr13	protein_coding	unc-5 netrin receptor A
chr13	55162942	55168959	-	55162942;55167260	55167141;55168959	ES	0.33	50	50	ENSMUST00000052949.13	ENSMUSG00000025877.15	Hk3	chr13	protein_coding	hexokinase 3
chr13	55162942;55163650	55163564;55167141	-	55162942	55167141	cassetteExon	0.5	100	100	ENSMUST00000052949.13	ENSMUSG00000025877.15	Hk3	chr13	protein_coding	hexokinase 3
chr13	55167260;55168632	55168583;55168959	-	55167260	55168959	cassetteExon	0.5	100	100	ENSMUST00000052949.13	ENSMUSG00000025877.15	Hk3	chr13	protein_coding	hexokinase 3
chr13	55159121	55159840	-	55159256	55159840	A3SS	0.5	50	50	ENSMUST00000052949.13	ENSMUSG00000025877.15	Hk3	chr13	protein_coding	hexokinase 3
chr13	55162140	55162296	-	55162140	55162240	A5SS	0.5	50	50	ENSMUST00000052949.13	ENSMUSG00000025877.15	Hk3	chr13	protein_coding	hexokinase 3
chr13	55168632	55168959	-	55162942	55168959	A3SS	0.33	50	50	ENSMUST00000153665.8	ENSMUSG00000025877.15	Hk3	chr13	protein_coding	hexokinase 3
chr13	55162942	55163564	-	55162942	55168959	A5SS	0.33	50	50	ENSMUST00000153665.8	ENSMUSG00000025877.15	Hk3	chr13	protein_coding	hexokinase 3
chr13	55167260	55168959	-	55167260	55168583	5pMXE	0.5	50	50	ENSMUST00000126234.8	ENSMUSG00000025877.15	Hk3	chr13	protein_coding	hexokinase 3
chr13	55162942	55167141	-	55163650	55167141	3pMXE	0.5	50	50	ENSMUST00000135983.2	ENSMUSG00000025877.15	Hk3	chr13	protein_coding	hexokinase 3
chr13	55208155	55223071	-	55208155;55217620	55217535;55223071	ES	0.5	50	50	ENSMUST00000026997.12	ENSMUSG00000025878.17	Uimc1	chr13	protein_coding	ubiquitin interaction motif containing 1
chr13	55208155;55217620	55217535;55225216	-	55208155;55224220	55223071;55225216	MXE	0.5	100	100	ENSMUST00000148702.8	ENSMUSG00000025878.17	Uimc1	chr13	protein_coding	ubiquitin interaction motif containing 1
chr13	55224220	55225216	-	55217620	55225216	A3SS	0.5	50	50	ENSMUST00000099496.4	ENSMUSG00000025878.17	Uimc1	chr13	protein_coding	ubiquitin interaction motif containing 1
chr13	55208155	55223071	-	55208155	55217535	A5SS&ES	0.5	50	50	ENSMUST00000099496.4	ENSMUSG00000025878.17	Uimc1	chr13	protein_coding	ubiquitin interaction motif containing 1
chr13	55217620	55223071	-	55217620	55225216	A5SS	0.5	50	50	ENSMUST00000099496.4	ENSMUSG00000025878.17	Uimc1	chr13	protein_coding	ubiquitin interaction motif containing 1
chr13	55261583	55278347	+	55261583	55270095	3pMXE	0.2	50	50	ENSMUST00000161018.8	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55261583	55280120	+	55261583	55270095	3pMXE	0.2	50	50	ENSMUST00000161018.8	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55260952;55263437	55263296;55270095	+	55260952;55261583	55261491;55270095	MXE	0.5	100	100	ENSMUST00000161018.8	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55261583;55263437	55263293;55270095	+	55261583	55270095	cassetteExon	0.5	100	100	ENSMUST00000161018.8	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55260952	55270143	+	55260952	55261491	A3SS&ES	0.33	50	50	ENSMUST00000161018.8	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55261583	55270143	+	55261583	55270095	A3SS	0.2	50	50	ENSMUST00000161018.8	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55260952;55270328	55270143;55280120	+	55260952;55261583	55261491;55280120	MXE	0.5	100	100	ENSMUST00000161315.8	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55261583;55270328	55270095;55280120	+	55261583	55280120	cassetteExon	0.5	100	100	ENSMUST00000161315.8	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55261583;55270328	55270143;55280120	+	55261583	55280120	cassetteExon	0.5	100	100	ENSMUST00000161315.8	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55261583;55278440	55278347;55280120	+	55261583	55280120	cassetteExon	0.5	100	100	ENSMUST00000161315.8	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55260952	55263296	+	55260952	55261491	A3SS&ES	0.33	50	50	ENSMUST00000161315.8	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55261583	55263293	+	55261583	55280120	A3SS	0.2	50	50	ENSMUST00000161315.8	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55261583	55270143	+	55261583;55263437	55263293;55270143	ES	0.33	50	50	ENSMUST00000021937.12	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55270328	55280120	+	55270328;55278440	55278347;55280120	ES	0.33	50	50	ENSMUST00000021937.12	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55261583	55270095	+	55261583	55263293	A3SS&ES	0.2	50	50	ENSMUST00000021937.12	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55263437	55270095	+	55263437	55270143	A3SS	0.5	50	50	ENSMUST00000021937.12	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55270328	55278350	+	55270328	55278347	A3SS	0.33	50	50	ENSMUST00000021937.12	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55270328	55280120	+	55270328;55278440	55278350;55280120	ES	0.33	50	50	ENSMUST00000159278.8	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55261583	55270143	+	55261583	55263293	A3SS&ES	0.2	50	50	ENSMUST00000159278.8	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55261583	55278347	+	55261583	55263293	A3SS&ES	0.2	50	50	ENSMUST00000159278.8	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55270328	55280120	+	55270328	55278347	3pMXE	0.33	50	50	ENSMUST00000161551.8	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55260952;55261583	55261491;55270143	+	55260952	55270143	cassetteExon	0.5	100	100	ENSMUST00000161551.8	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55260952;55261583	55261491;55278347	+	55260952;55270328	55270143;55278347	MXE	0.5	100	100	ENSMUST00000161551.8	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55260952;55263437	55263296;55270143	+	55260952	55270143	cassetteExon	0.5	100	100	ENSMUST00000161551.8	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55260952;55261583	55261491;55270143	+	55260952;55263437	55263296;55270143	MXE	0.5	100	100	ENSMUST00000159147.8	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55260952;55261583	55261491;55278347	+	55260952;55270328	55263296;55278347	MXE	0.5	100	100	ENSMUST00000159147.8	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55260952;55261583	55261491;55280120	+	55260952;55278440	55263296;55280120	MXE	0.5	100	100	ENSMUST00000159147.8	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55261583	55278347	+	55261583;55270328	55270143;55278347	ES	0.5	50	50	ENSMUST00000162476.8	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55260952;55270328	55270143;55280120	+	55260952;55278440	55261491;55280120	MXE	0.5	100	100	ENSMUST00000160660.8	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55261583;55270328	55270095;55278347	+	55261583	55278347	cassetteExon	0.5	100	100	ENSMUST00000160660.8	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55261583;55270328	55270095;55280120	+	55261583;55278440	55278347;55280120	MXE	0.5	100	100	ENSMUST00000160660.8	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55261583;55270328	55270143;55280120	+	55261583;55278440	55278347;55280120	MXE	0.5	100	100	ENSMUST00000160660.8	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55261583;55278440	55278347;55280120	+	55261583;55270328	55263293;55280120	MXE	0.5	100	100	ENSMUST00000161077.2	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55261583	55278347	+	55270328	55278347	5pMXE	0.5	50	50	ENSMUST00000160310.2	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55261583	55280120	+	55278440	55280120	5pMXE	0.33	50	50	ENSMUST00000162653.2	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55270328	55280120	+	55278440	55280120	5pMXE	0.33	50	50	ENSMUST00000162653.2	ENSMUSG00000021481.12	Zfp346	chr13	protein_coding	zinc finger protein 346
chr13	55303599	55304044	+	55303384	55304044	A5SS	0.5	50	50	ENSMUST00000005452.6	ENSMUSG00000005320.10	Fgfr4	chr13	protein_coding	fibroblast growth factor receptor 4
chr13	55424454;55425240	55425087;55425345	+	55424454	55425345	cassetteExon	0.5	100	100	ENSMUST00000224973.2	ENSMUSG00000021488.9	Nsd1	chr13	protein_coding	nuclear receptor-binding SET-domain protein 1
chr13	55361963	55381708	+	55361963	55393331	A3SS	0.5	50	50	ENSMUST00000224973.2	ENSMUSG00000021488.9	Nsd1	chr13	protein_coding	nuclear receptor-binding SET-domain protein 1
chr13	55358878	55361017	+	55357688	55361017	A5SS	0.16	50	50	ENSMUST00000224973.2	ENSMUSG00000021488.9	Nsd1	chr13	protein_coding	nuclear receptor-binding SET-domain protein 1
chr13	55359402	55361017	+	55357688	55361017	A5SS	0.16	50	50	ENSMUST00000224973.2	ENSMUSG00000021488.9	Nsd1	chr13	protein_coding	nuclear receptor-binding SET-domain protein 1
chr13	55359813	55361017	+	55357688	55361017	A5SS	0.16	50	50	ENSMUST00000224973.2	ENSMUSG00000021488.9	Nsd1	chr13	protein_coding	nuclear receptor-binding SET-domain protein 1
chr13	55359920	55361017	+	55357688	55361017	A5SS	0.16	50	50	ENSMUST00000224973.2	ENSMUSG00000021488.9	Nsd1	chr13	protein_coding	nuclear receptor-binding SET-domain protein 1
chr13	55360430	55361017	+	55357688	55361017	A5SS	0.16	50	50	ENSMUST00000224973.2	ENSMUSG00000021488.9	Nsd1	chr13	protein_coding	nuclear receptor-binding SET-domain protein 1
chr13	55386675	55393331	+	55361963	55393331	A5SS	0.5	50	50	ENSMUST00000224973.2	ENSMUSG00000021488.9	Nsd1	chr13	protein_coding	nuclear receptor-binding SET-domain protein 1
chr13	55386675	55388355	+	55386675	55393331	A3SS	0.5	50	50	ENSMUST00000099490.3	ENSMUSG00000021488.9	Nsd1	chr13	protein_coding	nuclear receptor-binding SET-domain protein 1
chr13	55359402	55361017	+	55358878	55361017	A5SS	0.16	50	50	ENSMUST00000224156.2	ENSMUSG00000021488.9	Nsd1	chr13	protein_coding	nuclear receptor-binding SET-domain protein 1
chr13	55359813	55361017	+	55358878	55361017	A5SS	0.16	50	50	ENSMUST00000224156.2	ENSMUSG00000021488.9	Nsd1	chr13	protein_coding	nuclear receptor-binding SET-domain protein 1
chr13	55359920	55361017	+	55358878	55361017	A5SS	0.16	50	50	ENSMUST00000224156.2	ENSMUSG00000021488.9	Nsd1	chr13	protein_coding	nuclear receptor-binding SET-domain protein 1
chr13	55360430	55361017	+	55358878	55361017	A5SS	0.16	50	50	ENSMUST00000224156.2	ENSMUSG00000021488.9	Nsd1	chr13	protein_coding	nuclear receptor-binding SET-domain protein 1
chr13	55359813	55361017	+	55359402	55361017	A5SS	0.16	50	50	ENSMUST00000224338.2	ENSMUSG00000021488.9	Nsd1	chr13	protein_coding	nuclear receptor-binding SET-domain protein 1
chr13	55359920	55361017	+	55359402	55361017	A5SS	0.16	50	50	ENSMUST00000224338.2	ENSMUSG00000021488.9	Nsd1	chr13	protein_coding	nuclear receptor-binding SET-domain protein 1
chr13	55360430	55361017	+	55359402	55361017	A5SS	0.16	50	50	ENSMUST00000224338.2	ENSMUSG00000021488.9	Nsd1	chr13	protein_coding	nuclear receptor-binding SET-domain protein 1
chr13	55359920	55361017	+	55359813	55361017	A5SS	0.16	50	50	ENSMUST00000224918.2	ENSMUSG00000021488.9	Nsd1	chr13	protein_coding	nuclear receptor-binding SET-domain protein 1
chr13	55360430	55361017	+	55359813	55361017	A5SS	0.16	50	50	ENSMUST00000224918.2	ENSMUSG00000021488.9	Nsd1	chr13	protein_coding	nuclear receptor-binding SET-domain protein 1
chr13	55360430	55361017	+	55359920	55361017	A5SS	0.16	50	50	ENSMUST00000225194.2	ENSMUSG00000021488.9	Nsd1	chr13	protein_coding	nuclear receptor-binding SET-domain protein 1
chr13	55468027	55468125	-	55468049	55468125	A3SS	0.5	50	50	ENSMUST00000224685.2	ENSMUSG00000034789.9	Rab24	chr13	protein_coding	RAB24, member RAS oncogene family
chr13	55476456;55476733	55476651;55477082	-	55476456	55477082	cassetteExon	0.5	100	100	ENSMUST00000021941.8	ENSMUSG00000021485.15	Mxd3	chr13	protein_coding	Max dimerization protein 3
chr13	55525841	55526515	+	55525841;55526211	55526033;55526515	ES	0.5	50	50	ENSMUST00000063771.14	ENSMUSG00000052087.15	Rgs14	chr13	protein_coding	regulator of G-protein signaling 14
chr13	55547548	55548250	+	55546092	55548250	A5SS	0.5	50	50	ENSMUST00000225259.2	ENSMUSG00000021490.12	Slc34a1	chr13	protein_coding	solute carrier family 34 (sodium phosphate), member 1
chr13	55548650;55549083	55548738;55550481	+	55548650	55550481	cassetteExon	0.5	100	100	ENSMUST00000224925.2	ENSMUSG00000021490.12	Slc34a1	chr13	protein_coding	solute carrier family 34 (sodium phosphate), member 1
chr13	55570585	55574116	-	55566313	55574116	A3SS	0.5	50	50	ENSMUST00000170921.2	ENSMUSG00000021492.16	F12	chr13	protein_coding	coagulation factor XII (Hageman factor)
chr13	55566313	55567930	-	55566313	55574116	A5SS	0.5	50	50	ENSMUST00000170921.2	ENSMUSG00000021492.16	F12	chr13	protein_coding	coagulation factor XII (Hageman factor)
chr13	55599396	55599531	+	55599396	55599516	A3SS	0.5	50	50	ENSMUST00000224653.2	ENSMUSG00000074886.12	Grk6	chr13	protein_coding	G protein-coupled receptor kinase 6
chr13	55599656	55600050	+	55599656	55599948	A3SS	0.5	50	50	ENSMUST00000224653.2	ENSMUSG00000074886.12	Grk6	chr13	protein_coding	G protein-coupled receptor kinase 6
chr13	55606960	55607146	+	55606960	55607595	A3SS	0.33	50	50	ENSMUST00000224653.2	ENSMUSG00000074886.12	Grk6	chr13	protein_coding	G protein-coupled receptor kinase 6
chr13	55606960	55607597	+	55606960	55607595	A3SS	0.33	50	50	ENSMUST00000224653.2	ENSMUSG00000074886.12	Grk6	chr13	protein_coding	G protein-coupled receptor kinase 6
chr13	55593373	55597121	+	55593094	55597121	A5SS	0.5	50	50	ENSMUST00000224653.2	ENSMUSG00000074886.12	Grk6	chr13	protein_coding	G protein-coupled receptor kinase 6
chr13	55606960	55607146	+	55606960	55607597	A3SS	0.33	50	50	ENSMUST00000225925.2	ENSMUSG00000074886.12	Grk6	chr13	protein_coding	G protein-coupled receptor kinase 6
chr13	55624129;55624586	55624449;55625364	-	55624129	55625364	cassetteExon	0.5	100	100	ENSMUST00000109923.9	ENSMUSG00000034675.18	Dbn1	chr13	protein_coding	drebrin 1
chr13	55622374	55622673	-	55622371	55622673	A3SS	0.5	50	50	ENSMUST00000109923.9	ENSMUSG00000034675.18	Dbn1	chr13	protein_coding	drebrin 1
chr13	55631255	55634394	-	55631255	55635676	A5SS	0.33	50	50	ENSMUST00000109923.9	ENSMUSG00000034675.18	Dbn1	chr13	protein_coding	drebrin 1
chr13	55631255	55635322	-	55631255	55635676	A5SS	0.33	50	50	ENSMUST00000109923.9	ENSMUSG00000034675.18	Dbn1	chr13	protein_coding	drebrin 1
chr13	55624129	55625364	-	55624586	55625364	A3SS	0.5	50	50	ENSMUST00000135705.8	ENSMUSG00000034675.18	Dbn1	chr13	protein_coding	drebrin 1
chr13	55631255	55634394	-	55631255	55635322	A5SS	0.33	50	50	ENSMUST00000139275.8	ENSMUSG00000034675.18	Dbn1	chr13	protein_coding	drebrin 1
chr13	55655437	55656593	-	55655437;55656139	55656021;55656593	ES	0.33	50	50	ENSMUST00000155098.8	ENSMUSG00000021493.16	Pdlim7	chr13	protein_coding	PDZ and LIM domain 7
chr13	55660231	55661417	-	55660231	55661180	5pMXE	0.33	50	50	ENSMUST00000155098.8	ENSMUSG00000021493.16	Pdlim7	chr13	protein_coding	PDZ and LIM domain 7
chr13	55655437;55655693	55655677;55656021	-	55655437	55656021	cassetteExon	0.5	100	100	ENSMUST00000155098.8	ENSMUSG00000021493.16	Pdlim7	chr13	protein_coding	PDZ and LIM domain 7
chr13	55655437;55655693	55655677;55656593	-	55655437;55656139	55656021;55656593	MXE	0.5	100	100	ENSMUST00000155098.8	ENSMUSG00000021493.16	Pdlim7	chr13	protein_coding	PDZ and LIM domain 7
chr13	55654936	55655143	-	55654180	55655143	A3SS	0.5	50	50	ENSMUST00000155098.8	ENSMUSG00000021493.16	Pdlim7	chr13	protein_coding	PDZ and LIM domain 7
chr13	55660231	55660343	-	55660231	55661180	A5SS	0.33	50	50	ENSMUST00000155098.8	ENSMUSG00000021493.16	Pdlim7	chr13	protein_coding	PDZ and LIM domain 7
chr13	55655437;55655693	55655677;55656593	-	55655437	55656593	cassetteExon	0.5	100	100	ENSMUST00000128910.8	ENSMUSG00000021493.16	Pdlim7	chr13	protein_coding	PDZ and LIM domain 7
chr13	55655437;55656139	55655677;55656593	-	55655437	55656593	cassetteExon	0.5	100	100	ENSMUST00000128910.8	ENSMUSG00000021493.16	Pdlim7	chr13	protein_coding	PDZ and LIM domain 7
chr13	55655693;55656139	55656021;55656593	-	55655693	55656593	cassetteExon	0.5	100	100	ENSMUST00000069929.13	ENSMUSG00000021493.16	Pdlim7	chr13	protein_coding	PDZ and LIM domain 7
chr13	55655437	55656593	-	55656139	55656593	A3SS	0.33	50	50	ENSMUST00000131306.8	ENSMUSG00000021493.16	Pdlim7	chr13	protein_coding	PDZ and LIM domain 7
chr13	55655693	55656593	-	55656139	55656593	A3SS	0.33	50	50	ENSMUST00000131306.8	ENSMUSG00000021493.16	Pdlim7	chr13	protein_coding	PDZ and LIM domain 7
chr13	55660231	55660343	-	55660231	55661417	A5SS	0.33	50	50	ENSMUST00000144288.8	ENSMUSG00000021493.16	Pdlim7	chr13	protein_coding	PDZ and LIM domain 7
chr13	55689534	55690597	-	55689534	55690395	A5SS	0.5	50	50	ENSMUST00000225703.2	ENSMUSG00000021495.11	Fam193b	chr13	protein_coding	family with sequence similarity 193, member B
chr13	55689534	55690597	-	55689534;55690470	55690395;55690597	ES	0.5	50	50	ENSMUST00000225240.3	ENSMUSG00000021495.11	Fam193b	chr13	protein_coding	family with sequence similarity 193, member B
chr13	55691602;55697170	55696931;55698037	-	55691602	55698037	cassetteExon	0.5	100	100	ENSMUST00000225240.3	ENSMUSG00000021495.11	Fam193b	chr13	protein_coding	family with sequence similarity 193, member B
chr13	55691602	55717518	-	55691602	55698037	A5SS&ES	0.33	50	50	ENSMUST00000225240.3	ENSMUSG00000021495.11	Fam193b	chr13	protein_coding	family with sequence similarity 193, member B
chr13	55704038	55712333	-	55704038	55718588	A5SS	0.5	50	50	ENSMUST00000225240.3	ENSMUSG00000021495.11	Fam193b	chr13	protein_coding	family with sequence similarity 193, member B
chr13	55691602	55717518	-	55691602	55696931	5pMXE	0.33	50	50	ENSMUST00000224486.2	ENSMUSG00000021495.11	Fam193b	chr13	protein_coding	family with sequence similarity 193, member B
chr13	55691602	55698037	-	55691602	55696931	A5SS	0.33	50	50	ENSMUST00000224486.2	ENSMUSG00000021495.11	Fam193b	chr13	protein_coding	family with sequence similarity 193, member B
chr13	55689534	55690597	-	55690470	55690597	3pMXE	0.5	50	50	ENSMUST00000224572.2	ENSMUSG00000021495.11	Fam193b	chr13	protein_coding	family with sequence similarity 193, member B
chr13	55712393	55717518	-	55691602	55717518	A3SS	0.5	50	50	ENSMUST00000224275.2	ENSMUSG00000021495.11	Fam193b	chr13	protein_coding	family with sequence similarity 193, member B
chr13	55741170	55741314	+	55740847	55741314	A5SS	0.5	50	50	ENSMUST00000224741.2	ENSMUSG00000058569.9	Tmed9	chr13	protein_coding	transmembrane p24 trafficking protein 9
chr13	55756238;55756615	55756511;55757032	+	55756238	55757032	cassetteExon	0.5	100	100	ENSMUST00000100764.10	ENSMUSG00000021504.15	B4galt7	chr13	protein_coding	xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)
chr13	55748005	55751933	+	55748005	55751833	A3SS	0.5	50	50	ENSMUST00000100764.10	ENSMUSG00000021504.15	B4galt7	chr13	protein_coding	xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)
chr13	55756238	55757032	+	55756238	55756511	3pMXE	0.5	50	50	ENSMUST00000133176.8	ENSMUSG00000021504.15	B4galt7	chr13	protein_coding	xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)
chr13	55806982	55811032	+	55808612	55811032	A5SS&ES	0.5	50	50	ENSMUST00000172272.8	ENSMUSG00000021500.18	Ddx46	chr13	protein_coding	DEAD box helicase 46
chr13	55821927	55823709	+	55821930	55823709	A5SS	0.5	50	50	ENSMUST00000172272.8	ENSMUSG00000021500.18	Ddx46	chr13	protein_coding	DEAD box helicase 46
chr13	55923916	55931695	-	55923206	55931695	A3SS	0.33	50	50	ENSMUST00000154384.8	ENSMUSG00000069223.11	4930451E10Rik	chr13	lncRNA	RIKEN cDNA 4930451E10 gene
chr13	55924123	55931695	-	55923206	55931695	A3SS	0.33	50	50	ENSMUST00000154384.8	ENSMUSG00000069223.11	4930451E10Rik	chr13	lncRNA	RIKEN cDNA 4930451E10 gene
chr13	55931884	55932238	-	55931806	55932238	A3SS	0.5	50	50	ENSMUST00000154384.8	ENSMUSG00000069223.11	4930451E10Rik	chr13	lncRNA	RIKEN cDNA 4930451E10 gene
chr13	55924123	55931695	-	55923916	55931695	A3SS	0.33	50	50	ENSMUST00000130840.2	ENSMUSG00000069223.11	4930451E10Rik	chr13	lncRNA	RIKEN cDNA 4930451E10 gene
chr13	55934332	55946596	+	55934332	55946557	A3SS	0.5	50	50	ENSMUST00000021961.12	ENSMUSG00000021499.13	Catsper3	chr13	protein_coding	cation channel, sperm associated 3
chr13	55983548	55983801	-	55978821	55983801	A3SS	0.5	50	50	ENSMUST00000173618.2	ENSMUSG00000021506.8	Pitx1	chr13	protein_coding	paired-like homeodomain transcription factor 1
chr13	56150478	56160767	+	56111236	56160767	A5SS	0.5	50	50	ENSMUST00000237678.2	ENSMUSG00000114493.3	Gm47071	chr13	lncRNA	predicted gene, 47071
chr13	56276294	56283615	-	56276294	56283159	5pMXE	0.33	50	50	ENSMUST00000016081.13	ENSMUSG00000015937.16	Macroh2a1	chr13	protein_coding	macroH2A.1 histone
chr13	56232098;56236155	56236065;56243937	-	56232098;56237670	56237571;56243937	MXE	0.5	100	100	ENSMUST00000016081.13	ENSMUSG00000015937.16	Macroh2a1	chr13	protein_coding	macroH2A.1 histone
chr13	56243454	56243937	-	56237670	56243937	A3SS	0.33	50	50	ENSMUST00000016081.13	ENSMUSG00000015937.16	Macroh2a1	chr13	protein_coding	macroH2A.1 histone
chr13	56244044	56252115	-	56244047	56252115	A3SS	0.5	50	50	ENSMUST00000016081.13	ENSMUSG00000015937.16	Macroh2a1	chr13	protein_coding	macroH2A.1 histone
chr13	56276294	56282463	-	56276294	56283159	A5SS	0.33	50	50	ENSMUST00000016081.13	ENSMUSG00000015937.16	Macroh2a1	chr13	protein_coding	macroH2A.1 histone
chr13	56243454	56243937	-	56236155	56243937	A3SS	0.33	50	50	ENSMUST00000045788.9	ENSMUSG00000015937.16	Macroh2a1	chr13	protein_coding	macroH2A.1 histone
chr13	56232098	56236065	-	56232098	56237571	A5SS	0.5	50	50	ENSMUST00000141589.2	ENSMUSG00000015937.16	Macroh2a1	chr13	protein_coding	macroH2A.1 histone
chr13	56276294	56282463	-	56276294	56283615	A5SS	0.33	50	50	ENSMUST00000154778.8	ENSMUSG00000015937.16	Macroh2a1	chr13	protein_coding	macroH2A.1 histone
chr13	56324945	56326360	-	56324881	56326360	A3SS	0.5	50	50	ENSMUST00000169652.3	ENSMUSG00000049625.7	Tifab	chr13	protein_coding	TRAF-interacting protein with forkhead-associated domain, family member B
chr13	56437620;56440387	56440274;56443639	-	56437620	56443639	cassetteExon	0.5	100	100	ENSMUST00000224801.2	ENSMUSG00000021508.12	Cxcl14	chr13	protein_coding	chemokine (C-X-C motif) ligand 14
chr13	56671416;56673585	56673455;56674728	+	56671416	56674728	cassetteExon	0.5	100	100	ENSMUST00000121095.8	ENSMUSG00000035509.18	Fbxl21	chr13	protein_coding	F-box and leucine-rich repeat protein 21
chr13	56690684;56690863	56690782;56693432	-	56690684	56693432	cassetteExon	0.5	100	100	ENSMUST00000062806.6	ENSMUSG00000021539.10	Lect2	chr13	protein_coding	leukocyte cell-derived chemotaxin 2
chr13	56775868	56777502	+	56775868	56777431	A3SS	0.5	50	50	ENSMUST00000225600.2	ENSMUSG00000035493.11	Tgfbi	chr13	protein_coding	transforming growth factor, beta induced
chr13	56784481	56784951	+	56784481	56784929	A3SS	0.5	50	50	ENSMUST00000225600.2	ENSMUSG00000035493.11	Tgfbi	chr13	protein_coding	transforming growth factor, beta induced
chr13	56876442;56880105	56880003;56880663	+	56876442	56880663	cassetteExon	0.5	100	100	ENSMUST00000069557.14	ENSMUSG00000021540.17	Smad5	chr13	protein_coding	SMAD family member 5
chr13	56883869	56886547	+	56883869	56885148	A3SS	0.5	50	50	ENSMUST00000069557.14	ENSMUSG00000021540.17	Smad5	chr13	protein_coding	SMAD family member 5
chr13	56851389	56871242	+	56850944	56871242	A5SS	0.33	50	50	ENSMUST00000069557.14	ENSMUSG00000021540.17	Smad5	chr13	protein_coding	SMAD family member 5
chr13	56851625	56871242	+	56850944	56871242	A5SS	0.33	50	50	ENSMUST00000069557.14	ENSMUSG00000021540.17	Smad5	chr13	protein_coding	SMAD family member 5
chr13	56851625	56871242	+	56851389	56871242	A5SS	0.33	50	50	ENSMUST00000109876.8	ENSMUSG00000021540.17	Smad5	chr13	protein_coding	SMAD family member 5
chr13	56970454	57008703	-	56970454;56979263	56979099;57008703	ES	0.5	50	50	ENSMUST00000022023.13	ENSMUSG00000021541.15	Trpc7	chr13	protein_coding	transient receptor potential cation channel, subfamily C, member 7
chr13	56979263	57035152	-	56979263;57008885	57008703;57035152	ES	0.25	50	50	ENSMUST00000022023.13	ENSMUSG00000021541.15	Trpc7	chr13	protein_coding	transient receptor potential cation channel, subfamily C, member 7
chr13	56970454;56974786	56974663;56979099	-	56970454	56979099	cassetteExon	0.5	100	100	ENSMUST00000022023.13	ENSMUSG00000021541.15	Trpc7	chr13	protein_coding	transient receptor potential cation channel, subfamily C, member 7
chr13	56930401	56931436	-	56930404	56931436	A3SS	0.5	50	50	ENSMUST00000022023.13	ENSMUSG00000021541.15	Trpc7	chr13	protein_coding	transient receptor potential cation channel, subfamily C, member 7
chr13	56970454	56979083	-	56970454	56979099	A5SS	0.2	50	50	ENSMUST00000022023.13	ENSMUSG00000021541.15	Trpc7	chr13	protein_coding	transient receptor potential cation channel, subfamily C, member 7
chr13	56970454	56979083	-	56970454	56974663	A5SS&ES	0.2	50	50	ENSMUST00000151918.8	ENSMUSG00000021541.15	Trpc7	chr13	protein_coding	transient receptor potential cation channel, subfamily C, member 7
chr13	56958430;56970454	56970238;57035152	-	56958430	57035152	cassetteExon	0.5	100	100	ENSMUST00000173067.9	ENSMUSG00000021541.15	Trpc7	chr13	protein_coding	transient receptor potential cation channel, subfamily C, member 7
chr13	56979263	57035152	-	56958430	57035152	A3SS	0.25	50	50	ENSMUST00000173067.9	ENSMUSG00000021541.15	Trpc7	chr13	protein_coding	transient receptor potential cation channel, subfamily C, member 7
chr13	57008885	57035152	-	56958430	57035152	A3SS	0.25	50	50	ENSMUST00000173067.9	ENSMUSG00000021541.15	Trpc7	chr13	protein_coding	transient receptor potential cation channel, subfamily C, member 7
chr13	56970454;56979263	56979083;57035152	-	56970454	57035152	cassetteExon	0.5	100	100	ENSMUST00000173513.9	ENSMUSG00000021541.15	Trpc7	chr13	protein_coding	transient receptor potential cation channel, subfamily C, member 7
chr13	56970454;56979263	56979099;57035152	-	56970454	57035152	cassetteExon	0.5	100	100	ENSMUST00000173513.9	ENSMUSG00000021541.15	Trpc7	chr13	protein_coding	transient receptor potential cation channel, subfamily C, member 7
chr13	56970454;57008885	57008703;57035152	-	56970454	57035152	cassetteExon	0.5	100	100	ENSMUST00000173513.9	ENSMUSG00000021541.15	Trpc7	chr13	protein_coding	transient receptor potential cation channel, subfamily C, member 7
chr13	56970454	56974663	-	56970454	57035152	A5SS	0.2	50	50	ENSMUST00000173513.9	ENSMUSG00000021541.15	Trpc7	chr13	protein_coding	transient receptor potential cation channel, subfamily C, member 7
chr13	56970454	57008703	-	56970454;56979263	56979083;57008703	ES	0.5	50	50	ENSMUST00000173466.3	ENSMUSG00000021541.15	Trpc7	chr13	protein_coding	transient receptor potential cation channel, subfamily C, member 7
chr13	56970454;56979263	56979083;57035152	-	56970454;57008885	57008703;57035152	MXE	0.5	100	100	ENSMUST00000174457.9	ENSMUSG00000021541.15	Trpc7	chr13	protein_coding	transient receptor potential cation channel, subfamily C, member 7
chr13	56970454;56979263	56979099;57035152	-	56970454;57008885	57008703;57035152	MXE	0.5	100	100	ENSMUST00000174457.9	ENSMUSG00000021541.15	Trpc7	chr13	protein_coding	transient receptor potential cation channel, subfamily C, member 7
chr13	56970454	56974663	-	56970454	57008703	A5SS	0.2	50	50	ENSMUST00000174457.9	ENSMUSG00000021541.15	Trpc7	chr13	protein_coding	transient receptor potential cation channel, subfamily C, member 7
chr13	57843968;57850125	57850117;58055216	-	57843968	58055216	cassetteExon	0.5	100	100	ENSMUST00000187852.7	ENSMUSG00000056222.16	Spock1	chr13	protein_coding	sparc/osteonectin, cwcv and kazal-like domains proteoglycan 1
chr13	57578239	57583923	-	57571006	57583923	A3SS	0.5	50	50	ENSMUST00000187852.7	ENSMUSG00000056222.16	Spock1	chr13	protein_coding	sparc/osteonectin, cwcv and kazal-like domains proteoglycan 1
chr13	58243029	58247456	-	58243029	58260956	A5SS	0.5	50	50	ENSMUST00000160860.9	ENSMUSG00000014164.16	Klhl3	chr13	protein_coding	kelch-like 3
chr13	58305550;58305849	58305676;58307691	+	58305550	58307691	cassetteExon	0.5	100	100	ENSMUST00000226010.2	ENSMUSG00000050002.15	Idnk	chr13	protein_coding	idnK gluconokinase homolog (E. coli)
chr13	58308052	58311247	+	58308052;58310695	58310652;58311247	ES	0.5	50	50	ENSMUST00000051490.15	ENSMUSG00000050002.15	Idnk	chr13	protein_coding	idnK gluconokinase homolog (E. coli)
chr13	58327482	58330996	-	58327482;58328719	58328636;58330996	ES	0.33	50	50	ENSMUST00000058735.12	ENSMUSG00000005312.16	Ubqln1	chr13	protein_coding	ubiquilin 1
chr13	58327476	58330996	-	58328719	58330996	A3SS&ES	0.33	50	50	ENSMUST00000058735.12	ENSMUSG00000005312.16	Ubqln1	chr13	protein_coding	ubiquilin 1
chr13	58327476	58330996	-	58327482	58330996	A3SS	0.33	50	50	ENSMUST00000076454.8	ENSMUSG00000005312.16	Ubqln1	chr13	protein_coding	ubiquilin 1
chr13	58327482	58330996	-	58327482	58328636	5pMXE	0.5	50	50	ENSMUST00000225818.2	ENSMUSG00000005312.16	Ubqln1	chr13	protein_coding	ubiquilin 1
chr13	58386526	58391616	-	58386526;58389569	58389468;58391616	ES	0.5	50	50	ENSMUST00000091579.6	ENSMUSG00000021552.8	Gkap1	chr13	protein_coding	G kinase anchoring protein 1
chr13	58412013	58422466	-	58412013	58421888	5pMXE	0.25	50	50	ENSMUST00000091579.6	ENSMUSG00000021552.8	Gkap1	chr13	protein_coding	G kinase anchoring protein 1
chr13	58412013	58423314	-	58412013	58421888	5pMXE	0.25	50	50	ENSMUST00000091579.6	ENSMUSG00000021552.8	Gkap1	chr13	protein_coding	G kinase anchoring protein 1
chr13	58412013;58421635	58421448;58421888	-	58412013	58421888	cassetteExon	0.5	100	100	ENSMUST00000091579.6	ENSMUSG00000021552.8	Gkap1	chr13	protein_coding	G kinase anchoring protein 1
chr13	58412013	58423314	-	58412013	58422466	5pMXE	0.25	50	50	ENSMUST00000225034.2	ENSMUSG00000021552.8	Gkap1	chr13	protein_coding	G kinase anchoring protein 1
chr13	58412013	58421448	-	58412013	58422466	A5SS	0.25	50	50	ENSMUST00000225034.2	ENSMUSG00000021552.8	Gkap1	chr13	protein_coding	G kinase anchoring protein 1
chr13	58412013	58421448	-	58412013	58423314	A5SS	0.25	50	50	ENSMUST00000223811.2	ENSMUSG00000021552.8	Gkap1	chr13	protein_coding	G kinase anchoring protein 1
chr13	58443937	58446833	+	58443937	58444166	3pMXE	0.5	50	50	ENSMUST00000180452.8	ENSMUSG00000097399.8	Gm26555	chr13	lncRNA	predicted gene, 26555
chr13	58432062	58435727	+	58432062	58435631	A3SS	0.5	50	50	ENSMUST00000180452.8	ENSMUSG00000097399.8	Gm26555	chr13	lncRNA	predicted gene, 26555
chr13	58429129	58431967	+	58429129	58435993	A3SS	0.5	50	50	ENSMUST00000190479.2	ENSMUSG00000097399.8	Gm26555	chr13	lncRNA	predicted gene, 26555
chr13	58435884	58435993	+	58429129	58435993	A5SS	0.5	50	50	ENSMUST00000190479.2	ENSMUSG00000097399.8	Gm26555	chr13	lncRNA	predicted gene, 26555
chr13	58493643	58502379	-	58485500	58502379	A3SS	0.5	50	50	ENSMUST00000224694.2	ENSMUSG00000060176.5	Kif27	chr13	protein_coding	kinesin family member 27
chr13	58485500	58491680	-	58485500	58502379	A5SS	0.5	50	50	ENSMUST00000224694.2	ENSMUSG00000060176.5	Kif27	chr13	protein_coding	kinesin family member 27
chr13	58543501	58544641	-	58543501;58544073	58544002;58544641	ES	0.5	50	50	ENSMUST00000116403.9	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58544713	58546970	-	58544713;58545610	58545567;58546970	ES	0.5	50	50	ENSMUST00000116403.9	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58548231	58550207	-	58548231;58549931	58549878;58550207	ES	0.5	50	50	ENSMUST00000116403.9	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58548231;58548986	58548924;58549878	-	58548231	58549878	cassetteExon	0.5	100	100	ENSMUST00000116403.9	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58540230	58541010	-	58540290	58541010	A3SS	0.5	50	50	ENSMUST00000116403.9	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58541055	58541506	-	58541179	58541506	A3SS	0.5	50	50	ENSMUST00000116403.9	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58547804	58548156	-	58547804	58548147	A5SS	0.5	50	50	ENSMUST00000116403.9	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58548231	58549181	-	58548231	58549878	A5SS	0.14	50	50	ENSMUST00000116403.9	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58548231	58549349	-	58548231	58549878	A5SS	0.14	50	50	ENSMUST00000116403.9	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58548231	58549607	-	58548231	58549878	A5SS	0.14	50	50	ENSMUST00000116403.9	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58548231	58549674	-	58548231	58549878	A5SS	0.14	50	50	ENSMUST00000116403.9	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58548231;58549931	58549607;58550207	-	58548231	58550207	cassetteExon	0.5	100	100	ENSMUST00000224182.2	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58548231;58549931	58549674;58550207	-	58548231	58550207	cassetteExon	0.5	100	100	ENSMUST00000224182.2	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58548231	58548924	-	58548231	58550207	A5SS	0.14	50	50	ENSMUST00000224182.2	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58548231	58549181	-	58548231	58550207	A5SS	0.14	50	50	ENSMUST00000224182.2	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58548231	58549349	-	58548231	58550207	A5SS	0.14	50	50	ENSMUST00000224182.2	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58544713	58546970	-	58544713	58545567	5pMXE	0.5	50	50	ENSMUST00000177497.8	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58548231	58550207	-	58548231	58549878	5pMXE	0.14	50	50	ENSMUST00000225674.2	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58548231	58549181	-	58548231	58548924	A5SS&ES	0.16	50	50	ENSMUST00000176305.8	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58548231	58549349	-	58548231	58548924	A5SS&ES	0.16	50	50	ENSMUST00000176305.8	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58548231	58549607	-	58548231	58548924	A5SS&ES	0.16	50	50	ENSMUST00000176305.8	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58548231	58549674	-	58548231	58548924	A5SS&ES	0.16	50	50	ENSMUST00000176305.8	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58548231	58550207	-	58548231	58549607	5pMXE	0.14	50	50	ENSMUST00000225176.2	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58548231	58549181	-	58548231	58549607	A5SS	0.14	50	50	ENSMUST00000225176.2	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58548231	58549349	-	58548231	58549607	A5SS	0.14	50	50	ENSMUST00000225176.2	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58548231	58549674	-	58548231	58549607	A5SS	0.14	50	50	ENSMUST00000225176.2	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58548231	58549878	-	58548231	58548924	5pMXE	0.14	50	50	ENSMUST00000224524.2	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58548231	58549674	-	58548231	58549349	5pMXE	0.14	50	50	ENSMUST00000224342.2	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58548231	58549181	-	58548231	58549349	A5SS	0.14	50	50	ENSMUST00000224342.2	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58548231	58549674	-	58548231	58549181	5pMXE	0.14	50	50	ENSMUST00000224030.2	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58543501	58544641	-	58544073	58544641	3pMXE	0.5	50	50	ENSMUST00000177377.8	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58544713	58546970	-	58545610	58546970	3pMXE	0.5	50	50	ENSMUST00000176558.2	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58548231	58550207	-	58548231	58549674	5pMXE	0.14	50	50	ENSMUST00000223822.2	ENSMUSG00000021546.19	Hnrnpk	chr13	protein_coding	heterogeneous nuclear ribonucleoprotein K
chr13	58550603	58554816	+	58550331	58554816	A5SS	0.25	50	50	ENSMUST00000225828.2	ENSMUSG00000035367.10	Rmi1	chr13	protein_coding	RecQ mediated genome instability 1
chr13	58551433	58554816	+	58550331	58554816	A5SS	0.25	50	50	ENSMUST00000225828.2	ENSMUSG00000035367.10	Rmi1	chr13	protein_coding	RecQ mediated genome instability 1
chr13	58552469	58554816	+	58550331	58554816	A5SS	0.25	50	50	ENSMUST00000225828.2	ENSMUSG00000035367.10	Rmi1	chr13	protein_coding	RecQ mediated genome instability 1
chr13	58550603;58552469	58552385;58554816	+	58550603	58554816	cassetteExon	0.5	100	100	ENSMUST00000042450.10	ENSMUSG00000035367.10	Rmi1	chr13	protein_coding	RecQ mediated genome instability 1
chr13	58551433	58554816	+	58550603	58554816	A5SS	0.25	50	50	ENSMUST00000042450.10	ENSMUSG00000035367.10	Rmi1	chr13	protein_coding	RecQ mediated genome instability 1
chr13	58551433	58554816	+	58552469	58554816	A5SS&ES	0.33	50	50	ENSMUST00000225815.2	ENSMUSG00000035367.10	Rmi1	chr13	protein_coding	RecQ mediated genome instability 1
chr13	58736085;58745669	58745242;58758511	-	58736085	58758511	cassetteExon	0.5	100	100	ENSMUST00000022036.14	ENSMUSG00000021553.15	Slc28a3	chr13	protein_coding	solute carrier family 28 (sodium-coupled nucleoside transporter), member 3
chr13	58725586	58726219	-	58724683	58726219	A3SS	0.5	50	50	ENSMUST00000022036.14	ENSMUSG00000021553.15	Slc28a3	chr13	protein_coding	solute carrier family 28 (sodium-coupled nucleoside transporter), member 3
chr13	58892152;58907898	58907798;58909998	-	58892152	58909998	cassetteExon	0.5	100	100	ENSMUST00000223707.2	ENSMUSG00000114384.2	4930455J16Rik	chr13	lncRNA	RIKEN cDNA 4930455J16 gene
chr13	58904821	58907798	-	58892152	58907798	A3SS	0.5	50	50	ENSMUST00000224184.2	ENSMUSG00000114384.2	4930455J16Rik	chr13	lncRNA	RIKEN cDNA 4930455J16 gene
chr13	58954666	58954764	+	58954666	58956199	A3SS	0.5	50	50	ENSMUST00000225488.2	ENSMUSG00000055254.16	Ntrk2	chr13	protein_coding	neurotrophic tyrosine kinase, receptor, type 2
chr13	59026076	59026153	+	59026076	59133616	A3SS	0.2	50	50	ENSMUST00000225488.2	ENSMUSG00000055254.16	Ntrk2	chr13	protein_coding	neurotrophic tyrosine kinase, receptor, type 2
chr13	59026076	59035006	+	59026076	59133616	A3SS	0.2	50	50	ENSMUST00000225488.2	ENSMUSG00000055254.16	Ntrk2	chr13	protein_coding	neurotrophic tyrosine kinase, receptor, type 2
chr13	59026076	59035085	+	59026076	59133616	A3SS	0.2	50	50	ENSMUST00000225488.2	ENSMUSG00000055254.16	Ntrk2	chr13	protein_coding	neurotrophic tyrosine kinase, receptor, type 2
chr13	59026076	59079837	+	59026076	59133616	A3SS	0.2	50	50	ENSMUST00000225488.2	ENSMUSG00000055254.16	Ntrk2	chr13	protein_coding	neurotrophic tyrosine kinase, receptor, type 2
chr13	58955827	58956199	+	58954666	58956199	A5SS	0.5	50	50	ENSMUST00000225488.2	ENSMUSG00000055254.16	Ntrk2	chr13	protein_coding	neurotrophic tyrosine kinase, receptor, type 2
chr13	59026076	59026153	+	59026076	59079837	A3SS	0.2	50	50	ENSMUST00000224259.2	ENSMUSG00000055254.16	Ntrk2	chr13	protein_coding	neurotrophic tyrosine kinase, receptor, type 2
chr13	59026076	59035006	+	59026076	59079837	A3SS	0.2	50	50	ENSMUST00000224259.2	ENSMUSG00000055254.16	Ntrk2	chr13	protein_coding	neurotrophic tyrosine kinase, receptor, type 2
chr13	59026076	59035085	+	59026076	59079837	A3SS	0.2	50	50	ENSMUST00000224259.2	ENSMUSG00000055254.16	Ntrk2	chr13	protein_coding	neurotrophic tyrosine kinase, receptor, type 2
chr13	59026076	59035006	+	59026076	59026153	3pMXE	0.2	50	50	ENSMUST00000224402.2	ENSMUSG00000055254.16	Ntrk2	chr13	protein_coding	neurotrophic tyrosine kinase, receptor, type 2
chr13	59026076	59035085	+	59026076	59026153	3pMXE	0.2	50	50	ENSMUST00000224402.2	ENSMUSG00000055254.16	Ntrk2	chr13	protein_coding	neurotrophic tyrosine kinase, receptor, type 2
chr13	59026076	59035006	+	59026076	59035085	A3SS	0.2	50	50	ENSMUST00000225950.2	ENSMUSG00000055254.16	Ntrk2	chr13	protein_coding	neurotrophic tyrosine kinase, receptor, type 2
chr13	59294247	59305093	+	59294247;59297003	59296820;59305093	ES	0.5	50	50	ENSMUST00000225447.2	ENSMUSG00000114854.2	Gm34354	chr13	lncRNA	predicted gene, 34354
chr13	59325642;59330780	59330442;59333837	+	59325642	59333837	cassetteExon	0.5	100	100	ENSMUST00000225447.2	ENSMUSG00000114854.2	Gm34354	chr13	lncRNA	predicted gene, 34354
chr13	59305321	59310899	+	59305321	59325573	A3SS	0.5	50	50	ENSMUST00000225447.2	ENSMUSG00000114854.2	Gm34354	chr13	lncRNA	predicted gene, 34354
chr13	59325642	59333837	+	59325642	59330442	3pMXE	0.5	50	50	ENSMUST00000226009.2	ENSMUSG00000114854.2	Gm34354	chr13	lncRNA	predicted gene, 34354
chr13	59294247	59305093	+	59297003	59305093	5pMXE	0.5	50	50	ENSMUST00000225571.2	ENSMUSG00000114854.2	Gm34354	chr13	lncRNA	predicted gene, 34354
chr13	59344351	59345359	+	59344337	59345359	A5SS	0.5	50	50	ENSMUST00000224190.2	ENSMUSG00000114854.2	Gm34354	chr13	lncRNA	predicted gene, 34354
chr13	59328936	59330426	-	59318979	59330426	A3SS	0.5	50	50	ENSMUST00000225101.2	ENSMUSG00000114393.2	Gm47359	chr13	lncRNA	predicted gene, 47359
chr13	59476480	59477722	-	59442691	59477722	A3SS	0.5	50	50	ENSMUST00000225371.2	ENSMUSG00000114240.2	Gm47360	chr13	lncRNA	predicted gene, 47360
chr13	59562409	59563114	-	59562409	59563356	A5SS	0.5	50	50	ENSMUST00000225485.2	ENSMUSG00000114623.2	Gm34788	chr13	lncRNA	predicted gene, 34788
chr13	59598128	59609811	-	59598128;59608443	59608283;59609811	ES	0.5	50	50	ENSMUST00000022040.14	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59624952	59643147	-	59624952;59630418	59630331;59643147	ES	0.25	50	50	ENSMUST00000022040.14	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59662109	59672960	-	59662109;59665504	59665467;59672960	ES	0.5	50	50	ENSMUST00000022040.14	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59673053	59678871	-	59673053;59676332	59676201;59678871	ES	0.5	50	50	ENSMUST00000022040.14	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59676332	59679827	-	59676332;59679017	59678871;59679827	ES	0.5	50	50	ENSMUST00000022040.14	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59681053	59692201	-	59681053;59684187	59684063;59692201	ES	0.5	50	50	ENSMUST00000022040.14	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59692265	59706418	-	59692265	59705037	5pMXE	0.14	50	50	ENSMUST00000022040.14	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59692265	59732939	-	59692265	59705037	5pMXE	0.14	50	50	ENSMUST00000022040.14	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59681053;59681908	59681759;59684063	-	59681053	59684063	cassetteExon	0.5	100	100	ENSMUST00000022040.14	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59692265;59703624	59703494;59705037	-	59692265	59705037	cassetteExon	0.5	100	100	ENSMUST00000022040.14	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59600153	59608283	-	59598128	59608283	A3SS	0.33	50	50	ENSMUST00000022040.14	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59602494	59608283	-	59598128	59608283	A3SS	0.33	50	50	ENSMUST00000022040.14	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59641684	59643147	-	59630418	59643147	A3SS	0.25	50	50	ENSMUST00000022040.14	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59659325	59660138	-	59655870	59660138	A3SS	0.5	50	50	ENSMUST00000022040.14	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59624952	59629074	-	59624952	59630331	A5SS	0.33	50	50	ENSMUST00000022040.14	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59692265	59704503	-	59692265	59705037	A5SS	0.14	50	50	ENSMUST00000022040.14	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59692265	59704587	-	59692265	59705037	A5SS	0.14	50	50	ENSMUST00000022040.14	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59692265	59704912	-	59692265	59705037	A5SS	0.14	50	50	ENSMUST00000022040.14	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59692265	59704912	-	59692265	59704503	5pMXE	0.14	50	50	ENSMUST00000169745.8	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59692265	59706418	-	59692265	59704503	5pMXE	0.14	50	50	ENSMUST00000169745.8	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59692265	59732939	-	59692265	59704503	5pMXE	0.14	50	50	ENSMUST00000169745.8	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59692265	59703494	-	59692265	59704503	A5SS	0.14	50	50	ENSMUST00000169745.8	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59692265	59704587	-	59692265	59704503	A5SS	0.14	50	50	ENSMUST00000169745.8	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59692265	59706418	-	59692265	59704912	5pMXE	0.14	50	50	ENSMUST00000170555.8	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59692265	59732939	-	59692265	59704912	5pMXE	0.14	50	50	ENSMUST00000170555.8	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59641684	59643147	-	59624952	59643147	A3SS	0.25	50	50	ENSMUST00000170555.8	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59624952	59629074	-	59624952	59643147	A5SS	0.33	50	50	ENSMUST00000170555.8	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59692265	59703494	-	59692265	59704912	A5SS	0.14	50	50	ENSMUST00000170555.8	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59692265	59704587	-	59692265	59704912	A5SS	0.14	50	50	ENSMUST00000170555.8	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59673053;59676332	59676201;59679827	-	59673053;59679017	59678871;59679827	MXE	0.5	100	100	ENSMUST00000163149.9	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59624952	59643147	-	59598128	59643147	A3SS	0.25	50	50	ENSMUST00000163149.9	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59630418	59643147	-	59598128	59643147	A3SS	0.25	50	50	ENSMUST00000163149.9	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59641684	59643147	-	59598128	59643147	A3SS	0.25	50	50	ENSMUST00000163149.9	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59598128	59608283	-	59598128	59643147	A5SS	0.33	50	50	ENSMUST00000163149.9	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59598128	59609811	-	59598128	59643147	A5SS	0.33	50	50	ENSMUST00000163149.9	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59602494	59608283	-	59600153	59608283	A3SS	0.33	50	50	ENSMUST00000224397.2	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59624952	59643147	-	59630418	59643147	3pMXE	0.25	50	50	ENSMUST00000165477.9	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59681053	59681759	-	59681053	59692201	A5SS	0.33	50	50	ENSMUST00000167593.8	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59681053	59684063	-	59681053	59681759	5pMXE	0.33	50	50	ENSMUST00000165851.8	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59662109	59672960	-	59665504	59672960	3pMXE	0.5	50	50	ENSMUST00000165598.8	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59676332	59679827	-	59679017	59679827	3pMXE	0.5	50	50	ENSMUST00000166585.8	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59692265	59704587	-	59692265	59703494	A5SS&ES	0.2	50	50	ENSMUST00000166585.8	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59692265	59732939	-	59692265	59706418	5pMXE	0.14	50	50	ENSMUST00000168821.8	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59692265	59703494	-	59692265	59706418	A5SS	0.14	50	50	ENSMUST00000168821.8	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59692265	59704587	-	59692265	59706418	A5SS	0.14	50	50	ENSMUST00000168821.8	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59731044	59732939	-	59692265	59732939	A3SS	0.5	50	50	ENSMUST00000170520.8	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59692265	59703494	-	59692265	59732939	A5SS	0.14	50	50	ENSMUST00000170520.8	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59692265	59704587	-	59692265	59732939	A5SS	0.14	50	50	ENSMUST00000170520.8	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59681053	59692201	-	59684187	59692201	3pMXE	0.5	50	50	ENSMUST00000169434.2	ENSMUSG00000021557.16	Agtpbp1	chr13	protein_coding	ATP/GTP binding protein 1
chr13	59733273	59733967	+	59733106	59733967	A5SS	0.5	50	50	ENSMUST00000168367.8	ENSMUSG00000021555.16	Naa35	chr13	protein_coding	N(alpha)-acetyltransferase 35, NatC auxiliary subunit
chr13	59756009	59757293	+	59756009;59756658	59756575;59757293	ES	0.5	50	50	ENSMUST00000022038.15	ENSMUSG00000021555.16	Naa35	chr13	protein_coding	N(alpha)-acetyltransferase 35, NatC auxiliary subunit
chr13	59757407	59764558	+	59757407;59760629	59760451;59764558	ES	0.5	50	50	ENSMUST00000022038.15	ENSMUSG00000021555.16	Naa35	chr13	protein_coding	N(alpha)-acetyltransferase 35, NatC auxiliary subunit
chr13	59765840;59766092	59766045;59770680	+	59765840	59770680	cassetteExon	0.5	100	100	ENSMUST00000022038.15	ENSMUSG00000021555.16	Naa35	chr13	protein_coding	N(alpha)-acetyltransferase 35, NatC auxiliary subunit
chr13	59772417	59773215	+	59772417	59773233	A3SS	0.33	50	50	ENSMUST00000022038.15	ENSMUSG00000021555.16	Naa35	chr13	protein_coding	N(alpha)-acetyltransferase 35, NatC auxiliary subunit
chr13	59772417	59773278	+	59772417	59773233	A3SS	0.33	50	50	ENSMUST00000022038.15	ENSMUSG00000021555.16	Naa35	chr13	protein_coding	N(alpha)-acetyltransferase 35, NatC auxiliary subunit
chr13	59748858	59755060	+	59748885	59755060	A5SS	0.5	50	50	ENSMUST00000022038.15	ENSMUSG00000021555.16	Naa35	chr13	protein_coding	N(alpha)-acetyltransferase 35, NatC auxiliary subunit
chr13	59765760	59782232	+	59780842	59782232	A5SS&ES	0.5	50	50	ENSMUST00000022038.15	ENSMUSG00000021555.16	Naa35	chr13	protein_coding	N(alpha)-acetyltransferase 35, NatC auxiliary subunit
chr13	59756009	59757293	+	59756009	59756575	3pMXE	0.33	50	50	ENSMUST00000166923.9	ENSMUSG00000021555.16	Naa35	chr13	protein_coding	N(alpha)-acetyltransferase 35, NatC auxiliary subunit
chr13	59756009	59760451	+	59756009	59756575	3pMXE	0.33	50	50	ENSMUST00000166923.9	ENSMUSG00000021555.16	Naa35	chr13	protein_coding	N(alpha)-acetyltransferase 35, NatC auxiliary subunit
chr13	59756009	59760451	+	59756009;59757407	59757293;59760451	ES	0.5	50	50	ENSMUST00000172419.8	ENSMUSG00000021555.16	Naa35	chr13	protein_coding	N(alpha)-acetyltransferase 35, NatC auxiliary subunit
chr13	59756009;59757407	59757293;59764558	+	59756009;59760629	59760451;59764558	MXE	0.5	100	100	ENSMUST00000164011.8	ENSMUSG00000021555.16	Naa35	chr13	protein_coding	N(alpha)-acetyltransferase 35, NatC auxiliary subunit
chr13	59756009	59760451	+	59757407	59760451	5pMXE	0.5	50	50	ENSMUST00000163395.8	ENSMUSG00000021555.16	Naa35	chr13	protein_coding	N(alpha)-acetyltransferase 35, NatC auxiliary subunit
chr13	59772417	59773278	+	59772417	59773215	A3SS	0.33	50	50	ENSMUST00000163395.8	ENSMUSG00000021555.16	Naa35	chr13	protein_coding	N(alpha)-acetyltransferase 35, NatC auxiliary subunit
chr13	59813490;59822910	59822775;59823541	-	59813490	59823541	cassetteExon	0.5	100	100	ENSMUST00000022039.7	ENSMUSG00000021556.13	Golm1	chr13	protein_coding	golgi membrane protein 1
chr13	59797474	59798510	-	59797479	59798510	A3SS	0.5	50	50	ENSMUST00000022039.7	ENSMUSG00000021556.13	Golm1	chr13	protein_coding	golgi membrane protein 1
chr13	59813490	59823541	-	59822910	59823541	3pMXE	0.5	50	50	ENSMUST00000224160.2	ENSMUSG00000021556.13	Golm1	chr13	protein_coding	golgi membrane protein 1
chr13	59851836	59852860	-	59851836;59852015	59851955;59852860	ES	0.5	50	50	ENSMUST00000224982.2	ENSMUSG00000050876.10	Spata31d1a	chr13	protein_coding	spermatogenesis associated 31 subfamily D, member 1A
chr13	59894659	59897610	+	59891951	59897610	A5SS	0.5	50	50	ENSMUST00000224724.2	ENSMUSG00000114903.2	Gm46419	chr13	lncRNA	predicted gene, 46419
chr13	59882652	59885008	+	59882652	59886634	A3SS	0.5	50	50	ENSMUST00000225577.2	ENSMUSG00000097502.3	4930528D03Rik	chr13	lncRNA	RIKEN cDNA 4930528D03 gene
chr13	59891836	59894517	-	59891836	59892682	5pMXE	0.5	50	50	ENSMUST00000180139.3	ENSMUSG00000051054.5	1700014D04Rik	chr13	protein_coding	RIKEN cDNA 1700014D04 gene
chr13	59910609	59929832	-	59910609	59917438	5pMXE	0.33	50	50	ENSMUST00000057115.7	ENSMUSG00000044792.8	Isca1	chr13	protein_coding	iron-sulfur cluster assembly 1
chr13	59904817	59910450	-	59904817	59906704	A5SS&ES	0.5	50	50	ENSMUST00000057115.7	ENSMUSG00000044792.8	Isca1	chr13	protein_coding	iron-sulfur cluster assembly 1
chr13	59910609	59916940	-	59910609	59917438	A5SS	0.33	50	50	ENSMUST00000057115.7	ENSMUSG00000044792.8	Isca1	chr13	protein_coding	iron-sulfur cluster assembly 1
chr13	59910609	59929832	-	59910609	59916940	5pMXE	0.33	50	50	ENSMUST00000225877.2	ENSMUSG00000044792.8	Isca1	chr13	protein_coding	iron-sulfur cluster assembly 1
chr13	59920673	59929832	-	59910609	59929832	A3SS	0.25	50	50	ENSMUST00000225581.2	ENSMUSG00000114763.2	Gm49354	chr13	protein_coding	predicted gene, 49354
chr13	59926629	59929832	-	59910609	59929832	A3SS	0.25	50	50	ENSMUST00000225581.2	ENSMUSG00000114763.2	Gm49354	chr13	protein_coding	predicted gene, 49354
chr13	59927015	59929832	-	59910609	59929832	A3SS	0.25	50	50	ENSMUST00000225581.2	ENSMUSG00000114763.2	Gm49354	chr13	protein_coding	predicted gene, 49354
chr13	59917947	59918741	+	59917672	59918741	A5SS	0.33	50	50	ENSMUST00000225619.2	ENSMUSG00000089875.3	Etohd2	chr13	lncRNA	ethanol decreased 2
chr13	59918160	59918741	+	59917672	59918741	A5SS	0.33	50	50	ENSMUST00000225619.2	ENSMUSG00000089875.3	Etohd2	chr13	lncRNA	ethanol decreased 2
chr13	59918160	59918741	+	59917947	59918741	A5SS	0.33	50	50	ENSMUST00000163053.3	ENSMUSG00000089875.3	Etohd2	chr13	lncRNA	ethanol decreased 2
chr13	59920673	59929832	-	59920673;59926629	59926566;59929832	ES	0.33	50	50	ENSMUST00000071703.6	ENSMUSG00000035248.10	Tut7	chr13	protein_coding	terminal uridylyl transferase 7
chr13	59926629;59927015	59926951;59929832	-	59926629	59929832	cassetteExon	0.5	100	100	ENSMUST00000071703.6	ENSMUSG00000035248.10	Tut7	chr13	protein_coding	terminal uridylyl transferase 7
chr13	59950010;59950925	59950806;59953037	-	59950010	59953037	cassetteExon	0.5	100	100	ENSMUST00000071703.6	ENSMUSG00000035248.10	Tut7	chr13	protein_coding	terminal uridylyl transferase 7
chr13	59969924	59970271	-	59969924	59970895	A5SS	0.25	50	50	ENSMUST00000071703.6	ENSMUSG00000035248.10	Tut7	chr13	protein_coding	terminal uridylyl transferase 7
chr13	59969924	59970447	-	59969924	59970895	A5SS	0.25	50	50	ENSMUST00000071703.6	ENSMUSG00000035248.10	Tut7	chr13	protein_coding	terminal uridylyl transferase 7
chr13	59969924	59970790	-	59969924	59970895	A5SS	0.25	50	50	ENSMUST00000071703.6	ENSMUSG00000035248.10	Tut7	chr13	protein_coding	terminal uridylyl transferase 7
chr13	59920673;59927015	59926566;59929832	-	59920673	59929832	cassetteExon	0.5	100	100	ENSMUST00000224480.2	ENSMUSG00000035248.10	Tut7	chr13	protein_coding	terminal uridylyl transferase 7
chr13	59920673	59929832	-	59920673	59926566	5pMXE	0.5	50	50	ENSMUST00000224845.2	ENSMUSG00000035248.10	Tut7	chr13	protein_coding	terminal uridylyl transferase 7
chr13	59969924	59970271	-	59969924	59970447	A5SS	0.25	50	50	ENSMUST00000225576.2	ENSMUSG00000035248.10	Tut7	chr13	protein_coding	terminal uridylyl transferase 7
chr13	59969924	59970790	-	59969924	59970447	A5SS	0.25	50	50	ENSMUST00000225576.2	ENSMUSG00000035248.10	Tut7	chr13	protein_coding	terminal uridylyl transferase 7
chr13	59969924	59970271	-	59969924	59970790	A5SS	0.25	50	50	ENSMUST00000225179.2	ENSMUSG00000035248.10	Tut7	chr13	protein_coding	terminal uridylyl transferase 7
chr13	60050432	60063526	-	60050432	60054708	5pMXE	0.5	50	50	ENSMUST00000223864.2	ENSMUSG00000114490.2	Gm19866	chr13	lncRNA	predicted gene, 19866
chr13	60050432	60063526	-	60050432;60054811	60054708;60063526	ES	0.5	50	50	ENSMUST00000224295.2	ENSMUSG00000114490.2	Gm19866	chr13	lncRNA	predicted gene, 19866
chr13	60326155	60330656	+	60326155	60329484	3pMXE	0.5	50	50	ENSMUST00000224063.2	ENSMUSG00000114433.2	Gm48488	chr13	lncRNA	predicted gene, 48488
chr13	60574542	60574882	-	60574542	60582361	A5SS	0.5	50	50	ENSMUST00000225539.2	ENSMUSG00000114274.2	Gm35333	chr13	lncRNA	predicted gene, 35333
chr13	60615728	60628980	-	60615728	60625506	5pMXE	0.5	50	50	ENSMUST00000224075.2	ENSMUSG00000114566.2	Gm48500	chr13	lncRNA	predicted gene, 48500
chr13	60635259	60635847	-	60635441	60635847	A3SS	0.5	50	50	ENSMUST00000224431.2	ENSMUSG00000114452.2	A530001N23Rik	chr13	lncRNA	RIKEN cDNA A530001N23 gene
chr13	60749924	60750241	+	60749924	60750239	A3SS	0.5	50	50	ENSMUST00000226059.2	ENSMUSG00000021559.15	Dapk1	chr13	protein_coding	death associated protein kinase 1
chr13	60844266	60864500	+	60844266	60864492	A3SS	0.5	50	50	ENSMUST00000226059.2	ENSMUSG00000021559.15	Dapk1	chr13	protein_coding	death associated protein kinase 1
chr13	60750073	60750239	+	60749924	60750239	A5SS	0.5	50	50	ENSMUST00000226059.2	ENSMUSG00000021559.15	Dapk1	chr13	protein_coding	death associated protein kinase 1
chr13	60909698	60910171	+	60909677	60910171	A5SS	0.5	50	50	ENSMUST00000226059.2	ENSMUSG00000021559.15	Dapk1	chr13	protein_coding	death associated protein kinase 1
chr13	61002763	61044052	-	61002763	61012136	5pMXE	0.33	50	50	ENSMUST00000091569.7	ENSMUSG00000050345.10	4930486L24Rik	chr13	protein_coding	RIKEN cDNA 4930486L24 gene
chr13	61002763	61083361	-	61002763	61012136	5pMXE	0.33	50	50	ENSMUST00000091569.7	ENSMUSG00000050345.10	4930486L24Rik	chr13	protein_coding	RIKEN cDNA 4930486L24 gene
chr13	61043957	61044052	-	61002763	61044052	A3SS	0.5	50	50	ENSMUST00000225690.2	ENSMUSG00000114635.2	Gm49392	chr13	protein_coding	predicted gene, 49392
chr13	61043957	61083361	-	61002763	61083361	A3SS	0.33	50	50	ENSMUST00000225382.2	ENSMUSG00000114487.2	Gm49393	chr13	protein_coding	predicted gene, 49393
chr13	61083266	61083361	-	61002763	61083361	A3SS	0.33	50	50	ENSMUST00000225382.2	ENSMUSG00000114487.2	Gm49393	chr13	protein_coding	predicted gene, 49393
chr13	61002763	61044052	-	61002763	61083361	A5SS	0.33	50	50	ENSMUST00000225382.2	ENSMUSG00000114487.2	Gm49393	chr13	protein_coding	predicted gene, 49393
chr13	61043957	61083361	-	61043957	61044052	5pMXE	0.5	50	50	ENSMUST00000225439.2	ENSMUSG00000074874.11	Ctla2b	chr13	protein_coding	cytotoxic T lymphocyte-associated protein 2 beta
chr13	61043533	61043835	-	61043533	61043759	A5SS	0.5	50	50	ENSMUST00000225732.2	ENSMUSG00000074874.11	Ctla2b	chr13	protein_coding	cytotoxic T lymphocyte-associated protein 2 beta
chr13	61044559	61084284	-	61044559	61045149	5pMXE	0.33	50	50	ENSMUST00000021884.10	ENSMUSG00000074874.11	Ctla2b	chr13	protein_coding	cytotoxic T lymphocyte-associated protein 2 beta
chr13	61044559	61084305	-	61044559	61045149	5pMXE	0.33	50	50	ENSMUST00000021884.10	ENSMUSG00000074874.11	Ctla2b	chr13	protein_coding	cytotoxic T lymphocyte-associated protein 2 beta
chr13	61083889	61084284	-	61044559	61084284	A3SS	0.5	50	50	ENSMUST00000225802.2	ENSMUSG00000114432.2	Gm49391	chr13	protein_coding	predicted gene, 49391
chr13	61044559	61084305	-	61044559	61084284	A5SS	0.33	50	50	ENSMUST00000225802.2	ENSMUSG00000114432.2	Gm49391	chr13	protein_coding	predicted gene, 49391
chr13	61083889	61084305	-	61044559	61084305	A3SS	0.25	50	50	ENSMUST00000225859.2	ENSMUSG00000114432.2	Gm49391	chr13	protein_coding	predicted gene, 49391
chr13	61083930	61084305	-	61044559	61084305	A3SS	0.25	50	50	ENSMUST00000225859.2	ENSMUSG00000114432.2	Gm49391	chr13	protein_coding	predicted gene, 49391
chr13	61084233	61084305	-	61044559	61084305	A3SS	0.25	50	50	ENSMUST00000225859.2	ENSMUSG00000114432.2	Gm49391	chr13	protein_coding	predicted gene, 49391
chr13	61083889;61084233	61084200;61084305	-	61083889	61084305	cassetteExon	0.5	100	100	ENSMUST00000225167.2	ENSMUSG00000114432.2	Gm49391	chr13	protein_coding	predicted gene, 49391
chr13	61083266	61083361	-	61043957	61083361	A3SS	0.33	50	50	ENSMUST00000225167.2	ENSMUSG00000114432.2	Gm49391	chr13	protein_coding	predicted gene, 49391
chr13	61083930	61084305	-	61083889	61084305	A3SS	0.25	50	50	ENSMUST00000225167.2	ENSMUSG00000114432.2	Gm49391	chr13	protein_coding	predicted gene, 49391
chr13	61083889	61084284	-	61083889	61084305	A5SS	0.33	50	50	ENSMUST00000225167.2	ENSMUSG00000114432.2	Gm49391	chr13	protein_coding	predicted gene, 49391
chr13	61050460;61052124	61051994;61052589	-	61050460	61052589	cassetteExon	0.5	100	100	ENSMUST00000080766.8	ENSMUSG00000062705.8	Tpbpb	chr13	protein_coding	trophoblast specific protein beta
chr13	61083889	61084284	-	61083889	61084200	A5SS	0.33	50	50	ENSMUST00000225385.2	ENSMUSG00000044258.11	Ctla2a	chr13	protein_coding	cytotoxic T lymphocyte-associated protein 2 alpha
chr13	61083889	61084305	-	61083889	61084200	A5SS	0.33	50	50	ENSMUST00000225385.2	ENSMUSG00000044258.11	Ctla2a	chr13	protein_coding	cytotoxic T lymphocyte-associated protein 2 alpha
chr13	61083930	61084305	-	61084233	61084305	A3SS&ES	0.33	50	50	ENSMUST00000223750.2	ENSMUSG00000044258.11	Ctla2a	chr13	protein_coding	cytotoxic T lymphocyte-associated protein 2 alpha
chr13	61087812	61087963	-	61087867	61087963	A3SS	0.5	50	50	ENSMUST00000021885.8	ENSMUSG00000033834.8	Tpbpa	chr13	protein_coding	trophoblast specific protein alpha
chr13	61151929	61152239	-	61151932	61152239	A3SS	0.5	50	50	ENSMUST00000224224.2	ENSMUSG00000055298.7	Ctsj	chr13	protein_coding	cathepsin J
chr13	61151932	61152235	-	61151932	61152239	A5SS	0.5	50	50	ENSMUST00000224224.2	ENSMUSG00000055298.7	Ctsj	chr13	protein_coding	cathepsin J
chr13	61401906	61432957	-	61401906	61403090	5pMXE	0.5	50	50	ENSMUST00000021891.5	ENSMUSG00000057446.4	Cts8	chr13	protein_coding	cathepsin 8
chr13	61432454	61432957	-	61401906	61432957	A3SS	0.5	50	50	ENSMUST00000223988.2	ENSMUSG00000114473.2	Gm49398	chr13	protein_coding	predicted gene, 49398
chr13	61435097	61435372	-	61435088	61435372	A3SS	0.5	50	50	ENSMUST00000224763.2	ENSMUSG00000114867.2	Cts8-ps	chr13	transcribed_unprocessed_pseudogene	cathepsin 8, pseudogene
chr13	61504861	61505943	-	61504861	61505774	A5SS	0.5	50	50	ENSMUST00000224773.2	ENSMUSG00000021440.8	Cts7	chr13	protein_coding	cathepsin 7
chr13	61684468	61686198	-	61684468;61685626	61685509;61686198	ES	0.33	50	50	ENSMUST00000223778.2	ENSMUSG00000074871.4	Ctsm	chr13	protein_coding	cathepsin M
chr13	61685667	61686198	-	61685626	61686198	A3SS	0.33	50	50	ENSMUST00000223778.2	ENSMUSG00000074871.4	Ctsm	chr13	protein_coding	cathepsin M
chr13	61688201	61689565	-	61688129	61689565	A3SS	0.5	50	50	ENSMUST00000223778.2	ENSMUSG00000074871.4	Ctsm	chr13	protein_coding	cathepsin M
chr13	61684468	61686198	-	61684468;61685667	61685627;61686198	ES	0.33	50	50	ENSMUST00000225965.2	ENSMUSG00000074871.4	Ctsm	chr13	protein_coding	cathepsin M
chr13	61684468	61685509	-	61684468	61685627	A5SS	0.33	50	50	ENSMUST00000225965.2	ENSMUSG00000074871.4	Ctsm	chr13	protein_coding	cathepsin M
chr13	61684468;61685667	61685509;61686198	-	61684468	61686198	cassetteExon	0.5	100	100	ENSMUST00000225268.2	ENSMUSG00000074871.4	Ctsm	chr13	protein_coding	cathepsin M
chr13	61715389	61715869	-	61686944	61715869	A3SS	0.33	50	50	ENSMUST00000225902.2	ENSMUSG00000114904.2	Gm49352	chr13	protein_coding	predicted gene, 49352
chr13	61715435	61715869	-	61686944	61715869	A3SS	0.33	50	50	ENSMUST00000225902.2	ENSMUSG00000114904.2	Gm49352	chr13	protein_coding	predicted gene, 49352
chr13	61686944	61687365	-	61686944	61715869	A5SS	0.5	50	50	ENSMUST00000225902.2	ENSMUSG00000114904.2	Gm49352	chr13	protein_coding	predicted gene, 49352
chr13	61715389	61715869	-	61715435	61715869	A3SS	0.5	50	50	ENSMUST00000223815.2	ENSMUSG00000074870.5	Cts3	chr13	protein_coding	cathepsin 3
chr13	61716711	61717852	-	61716636	61717852	A3SS	0.5	50	50	ENSMUST00000223815.2	ENSMUSG00000074870.5	Cts3	chr13	protein_coding	cathepsin 3
chr13	61952219	62005783	+	61952219	61974123	3pMXE	0.5	50	50	ENSMUST00000221961.2	ENSMUSG00000113626.2	Gm7240	chr13	transcribed_processed_pseudogene	predicted gene 7240
chr13	62005909	62007518	+	62005909	62006095	3pMXE	0.5	50	50	ENSMUST00000222701.2	ENSMUSG00000113626.2	Gm7240	chr13	transcribed_processed_pseudogene	predicted gene 7240
chr13	62195121	62196730	+	62195121;62195367	62195307;62196730	ES	0.5	50	50	ENSMUST00000220871.2	ENSMUSG00000113836.2	Gm3325	chr13	transcribed_processed_pseudogene	predicted gene 3325
chr13	62254942	62259163	+	62254942	62259239	A3SS	0.5	50	50	ENSMUST00000222089.2	ENSMUSG00000113566.2	Gm40977	chr13	lncRNA	predicted gene, 40977
chr13	62258450	62259239	+	62254942	62259239	A5SS	0.5	50	50	ENSMUST00000222089.2	ENSMUSG00000113566.2	Gm40977	chr13	lncRNA	predicted gene, 40977
chr13	62317382;62317628	62317568;62318964	+	62317382	62318964	cassetteExon	0.5	100	100	ENSMUST00000221772.2	ENSMUSG00000074867.5	Zfp808	chr13	protein_coding	zinc finger protein 808
chr13	62351628	62381383	+	62351628	62381071	3pMXE	0.33	50	50	ENSMUST00000222809.2	ENSMUSG00000074867.5	Zfp808	chr13	protein_coding	zinc finger protein 808
chr13	62277842;62349199	62348994;62351246	+	62277842	62351246	cassetteExon	0.5	100	100	ENSMUST00000222809.2	ENSMUSG00000074867.5	Zfp808	chr13	protein_coding	zinc finger protein 808
chr13	62277842	62317256	+	62277842	62351246	A3SS	0.33	50	50	ENSMUST00000222809.2	ENSMUSG00000074867.5	Zfp808	chr13	protein_coding	zinc finger protein 808
chr13	62351628	62354025	+	62351628	62381071	A3SS	0.33	50	50	ENSMUST00000222809.2	ENSMUSG00000074867.5	Zfp808	chr13	protein_coding	zinc finger protein 808
chr13	62367451	62381071	+	62351628	62381071	A5SS	0.5	50	50	ENSMUST00000222809.2	ENSMUSG00000074867.5	Zfp808	chr13	protein_coding	zinc finger protein 808
chr13	62351628	62381383	+	62351628;62381197	62381071;62381383	ES	0.5	50	50	ENSMUST00000223094.2	ENSMUSG00000074867.5	Zfp808	chr13	protein_coding	zinc finger protein 808
chr13	62277842	62317256	+	62277842	62348994	A3SS	0.33	50	50	ENSMUST00000223094.2	ENSMUSG00000074867.5	Zfp808	chr13	protein_coding	zinc finger protein 808
chr13	62351628	62354025	+	62351628	62381383	A3SS	0.33	50	50	ENSMUST00000221542.2	ENSMUSG00000074867.5	Zfp808	chr13	protein_coding	zinc finger protein 808
chr13	62518165	62519624	-	62518165;62519437	62519377;62519624	ES	0.5	50	50	ENSMUST00000187656.7	ENSMUSG00000094942.8	Gm3604	chr13	protein_coding	predicted gene 3604
chr13	62561305	62564752	-	62555609	62564752	A3SS	0.5	50	50	ENSMUST00000221436.2	ENSMUSG00000113623.2	Gm48691	chr13	transcribed_processed_pseudogene	predicted gene, 48691
chr13	62551193	62558720	-	62551193	62555229	A5SS&ES	0.5	50	50	ENSMUST00000221436.2	ENSMUSG00000113623.2	Gm48691	chr13	transcribed_processed_pseudogene	predicted gene, 48691
chr13	62551193;62555609	62555229;62564752	-	62551193;62561305	62558720;62564752	MXE	0.5	100	100	ENSMUST00000221446.2	ENSMUSG00000113623.2	Gm48691	chr13	transcribed_processed_pseudogene	predicted gene, 48691
chr13	62603007	62604747	-	62603007;62604561	62604501;62604747	ES	0.5	50	50	ENSMUST00000221747.2	ENSMUSG00000113450.2	Gm49359	chr13	protein_coding	predicted gene, 49359
chr13	62604873	62706301	-	62604873	62614521	5pMXE	0.33	50	50	ENSMUST00000221747.2	ENSMUSG00000113450.2	Gm49359	chr13	protein_coding	predicted gene, 49359
chr13	62604873	62614385	-	62604873	62614521	A5SS	0.33	50	50	ENSMUST00000221747.2	ENSMUSG00000113450.2	Gm49359	chr13	protein_coding	predicted gene, 49359
chr13	62604873	62706301	-	62604873	62614385	5pMXE	0.33	50	50	ENSMUST00000221951.2	ENSMUSG00000113450.2	Gm49359	chr13	protein_coding	predicted gene, 49359
chr13	62640748	62706301	-	62604873	62706301	A3SS	0.12	50	50	ENSMUST00000076195.7	ENSMUSG00000055228.9	Zfp935	chr13	protein_coding	zinc finger protein 935
chr13	62642566	62706301	-	62604873	62706301	A3SS	0.12	50	50	ENSMUST00000076195.7	ENSMUSG00000055228.9	Zfp935	chr13	protein_coding	zinc finger protein 935
chr13	62653059	62706301	-	62604873	62706301	A3SS	0.12	50	50	ENSMUST00000076195.7	ENSMUSG00000055228.9	Zfp935	chr13	protein_coding	zinc finger protein 935
chr13	62668358	62706301	-	62604873	62706301	A3SS	0.12	50	50	ENSMUST00000076195.7	ENSMUSG00000055228.9	Zfp935	chr13	protein_coding	zinc finger protein 935
chr13	62670479	62706301	-	62604873	62706301	A3SS	0.12	50	50	ENSMUST00000076195.7	ENSMUSG00000055228.9	Zfp935	chr13	protein_coding	zinc finger protein 935
chr13	62682628	62706301	-	62604873	62706301	A3SS	0.12	50	50	ENSMUST00000076195.7	ENSMUSG00000055228.9	Zfp935	chr13	protein_coding	zinc finger protein 935
chr13	62703277	62706301	-	62604873	62706301	A3SS	0.12	50	50	ENSMUST00000076195.7	ENSMUSG00000055228.9	Zfp935	chr13	protein_coding	zinc finger protein 935
chr13	62640748	62706301	-	62640748;62653059	62652879;62706301	ES	0.14	50	50	ENSMUST00000221250.2	ENSMUSG00000074865.12	Zfp934	chr13	protein_coding	zinc finger protein 934
chr13	62640748;62642566	62642511;62706301	-	62640748;62653059	62652879;62706301	MXE	0.5	100	100	ENSMUST00000221250.2	ENSMUSG00000074865.12	Zfp934	chr13	protein_coding	zinc finger protein 934
chr13	62668358	62706301	-	62653059	62706301	A3SS	0.14	50	50	ENSMUST00000221250.2	ENSMUSG00000074865.12	Zfp934	chr13	protein_coding	zinc finger protein 934
chr13	62670479	62706301	-	62653059	62706301	A3SS	0.14	50	50	ENSMUST00000221250.2	ENSMUSG00000074865.12	Zfp934	chr13	protein_coding	zinc finger protein 934
chr13	62682628	62706301	-	62653059	62706301	A3SS	0.14	50	50	ENSMUST00000221250.2	ENSMUSG00000074865.12	Zfp934	chr13	protein_coding	zinc finger protein 934
chr13	62703277	62706301	-	62653059	62706301	A3SS	0.14	50	50	ENSMUST00000221250.2	ENSMUSG00000074865.12	Zfp934	chr13	protein_coding	zinc finger protein 934
chr13	62640748;62642566	62642511;62706301	-	62640748	62706301	cassetteExon	0.5	100	100	ENSMUST00000222429.2	ENSMUSG00000074865.12	Zfp934	chr13	protein_coding	zinc finger protein 934
chr13	62668358	62706301	-	62640748	62706301	A3SS	0.14	50	50	ENSMUST00000222429.2	ENSMUSG00000074865.12	Zfp934	chr13	protein_coding	zinc finger protein 934
chr13	62670479	62706301	-	62640748	62706301	A3SS	0.14	50	50	ENSMUST00000222429.2	ENSMUSG00000074865.12	Zfp934	chr13	protein_coding	zinc finger protein 934
chr13	62682628	62706301	-	62640748	62706301	A3SS	0.14	50	50	ENSMUST00000222429.2	ENSMUSG00000074865.12	Zfp934	chr13	protein_coding	zinc finger protein 934
chr13	62703277	62706301	-	62640748	62706301	A3SS	0.14	50	50	ENSMUST00000222429.2	ENSMUSG00000074865.12	Zfp934	chr13	protein_coding	zinc finger protein 934
chr13	62668358	62706301	-	62642566	62706301	A3SS	0.14	50	50	ENSMUST00000221494.2	ENSMUSG00000074865.12	Zfp934	chr13	protein_coding	zinc finger protein 934
chr13	62670479	62706301	-	62642566	62706301	A3SS	0.14	50	50	ENSMUST00000221494.2	ENSMUSG00000074865.12	Zfp934	chr13	protein_coding	zinc finger protein 934
chr13	62682628	62706301	-	62642566	62706301	A3SS	0.14	50	50	ENSMUST00000221494.2	ENSMUSG00000074865.12	Zfp934	chr13	protein_coding	zinc finger protein 934
chr13	62703277	62706301	-	62642566	62706301	A3SS	0.14	50	50	ENSMUST00000221494.2	ENSMUSG00000074865.12	Zfp934	chr13	protein_coding	zinc finger protein 934
chr13	62666544;62668046	62667986;62668232	-	62666544	62668232	cassetteExon	0.5	100	100	ENSMUST00000222746.2	ENSMUSG00000074865.12	Zfp934	chr13	protein_coding	zinc finger protein 934
chr13	62668358;62670479	62670269;62706301	-	62668358	62706301	cassetteExon	0.5	100	100	ENSMUST00000222746.2	ENSMUSG00000074865.12	Zfp934	chr13	protein_coding	zinc finger protein 934
chr13	62668358;62682628	62682425;62706301	-	62668358	62706301	cassetteExon	0.5	100	100	ENSMUST00000222746.2	ENSMUSG00000074865.12	Zfp934	chr13	protein_coding	zinc finger protein 934
chr13	62703277	62706301	-	62668358	62706301	A3SS	0.25	50	50	ENSMUST00000222746.2	ENSMUSG00000074865.12	Zfp934	chr13	protein_coding	zinc finger protein 934
chr13	62668358;62670479	62670269;62706301	-	62668358;62682628	62682425;62706301	MXE	0.5	100	100	ENSMUST00000220648.2	ENSMUSG00000074865.12	Zfp934	chr13	protein_coding	zinc finger protein 934
chr13	62703277	62706301	-	62682628	62706301	A3SS	0.25	50	50	ENSMUST00000220648.2	ENSMUSG00000074865.12	Zfp934	chr13	protein_coding	zinc finger protein 934
chr13	62703277	62706301	-	62670479	62706301	A3SS	0.25	50	50	ENSMUST00000222852.2	ENSMUSG00000074865.12	Zfp934	chr13	protein_coding	zinc finger protein 934
chr13	62700796	62703218	-	62700796	62718875	A5SS	0.5	50	50	ENSMUST00000221279.2	ENSMUSG00000074865.12	Zfp934	chr13	protein_coding	zinc finger protein 934
chr13	62753194;62755000	62754940;62755187	-	62753194	62755187	cassetteExon	0.5	100	100	ENSMUST00000201563.4	ENSMUSG00000072066.8	6720489N17Rik	chr13	protein_coding	RIKEN cDNA 6720489N17 gene
chr13	62823459	62853515	-	62823459	62832647	5pMXE	0.33	50	50	ENSMUST00000221996.2	ENSMUSG00000074863.6	Platr25	chr13	protein_coding	pluripotency associated transcript 25
chr13	62823459	62853944	-	62823459	62832647	5pMXE	0.33	50	50	ENSMUST00000221996.2	ENSMUSG00000074863.6	Platr25	chr13	protein_coding	pluripotency associated transcript 25
chr13	62823468	62832647	-	62823459	62832647	A3SS	0.5	50	50	ENSMUST00000221996.2	ENSMUSG00000074863.6	Platr25	chr13	protein_coding	pluripotency associated transcript 25
chr13	62823459	62853944	-	62823459;62853575	62853515;62853944	ES	0.5	50	50	ENSMUST00000220733.2	ENSMUSG00000074863.6	Platr25	chr13	protein_coding	pluripotency associated transcript 25
chr13	62854070;62872031	62871912;62886706	-	62854070	62886706	cassetteExon	0.5	100	100	ENSMUST00000220733.2	ENSMUSG00000074863.6	Platr25	chr13	protein_coding	pluripotency associated transcript 25
chr13	62886912;62894645	62894416;62908396	-	62886912	62908396	cassetteExon	0.5	100	100	ENSMUST00000220733.2	ENSMUSG00000074863.6	Platr25	chr13	protein_coding	pluripotency associated transcript 25
chr13	62886912;62894650	62894416;62908396	-	62886912	62908396	cassetteExon	0.5	100	100	ENSMUST00000220733.2	ENSMUSG00000074863.6	Platr25	chr13	protein_coding	pluripotency associated transcript 25
chr13	62823468	62853515	-	62823459	62853515	A3SS	0.33	50	50	ENSMUST00000220733.2	ENSMUSG00000074863.6	Platr25	chr13	protein_coding	pluripotency associated transcript 25
chr13	62849305	62853515	-	62823459	62853515	A3SS	0.33	50	50	ENSMUST00000220733.2	ENSMUSG00000074863.6	Platr25	chr13	protein_coding	pluripotency associated transcript 25
chr13	62854070	62855968	-	62854070	62886706	A5SS	0.25	50	50	ENSMUST00000220733.2	ENSMUSG00000074863.6	Platr25	chr13	protein_coding	pluripotency associated transcript 25
chr13	62854070	62860452	-	62854070	62886706	A5SS	0.25	50	50	ENSMUST00000220733.2	ENSMUSG00000074863.6	Platr25	chr13	protein_coding	pluripotency associated transcript 25
chr13	62886912	62887066	-	62886912	62908396	A5SS	0.33	50	50	ENSMUST00000220733.2	ENSMUSG00000074863.6	Platr25	chr13	protein_coding	pluripotency associated transcript 25
chr13	62854070	62871912	-	62854070	62860452	5pMXE	0.25	50	50	ENSMUST00000222477.2	ENSMUSG00000074863.6	Platr25	chr13	protein_coding	pluripotency associated transcript 25
chr13	62854070	62855968	-	62854070	62860452	A5SS	0.25	50	50	ENSMUST00000222477.2	ENSMUSG00000074863.6	Platr25	chr13	protein_coding	pluripotency associated transcript 25
chr13	62854070	62871912	-	62854070;62856023	62855968;62871912	ES	0.5	50	50	ENSMUST00000223219.2	ENSMUSG00000074863.6	Platr25	chr13	protein_coding	pluripotency associated transcript 25
chr13	62823459	62853944	-	62853575	62853944	A3SS&ES	0.5	50	50	ENSMUST00000223219.2	ENSMUSG00000074863.6	Platr25	chr13	protein_coding	pluripotency associated transcript 25
chr13	62849305	62853515	-	62823468	62853515	A3SS	0.33	50	50	ENSMUST00000223219.2	ENSMUSG00000074863.6	Platr25	chr13	protein_coding	pluripotency associated transcript 25
chr13	62823468	62832647	-	62823468	62853515	A5SS	0.5	50	50	ENSMUST00000223219.2	ENSMUSG00000074863.6	Platr25	chr13	protein_coding	pluripotency associated transcript 25
chr13	62854070	62886706	-	62854070	62871912	5pMXE	0.25	50	50	ENSMUST00000223528.2	ENSMUSG00000074863.6	Platr25	chr13	protein_coding	pluripotency associated transcript 25
chr13	62872031	62886706	-	62872031	62874389	5pMXE	0.5	50	50	ENSMUST00000143260.2	ENSMUSG00000074863.6	Platr25	chr13	protein_coding	pluripotency associated transcript 25
chr13	62886912;62887178	62887066;62894416	-	62886912	62894416	cassetteExon	0.5	100	100	ENSMUST00000222303.2	ENSMUSG00000074863.6	Platr25	chr13	protein_coding	pluripotency associated transcript 25
chr13	62894650	62908396	-	62894645	62908396	A3SS	0.33	50	50	ENSMUST00000222303.2	ENSMUSG00000074863.6	Platr25	chr13	protein_coding	pluripotency associated transcript 25
chr13	63002880	63004009	-	63002880	63005942	A5SS	0.5	50	50	ENSMUST00000021907.9	ENSMUSG00000021456.9	Fbp2	chr13	protein_coding	fructose bisphosphatase 2
chr13	63023125	63035465	-	63023125	63035688	A5SS	0.5	50	50	ENSMUST00000092888.11	ENSMUSG00000069805.11	Fbp1	chr13	protein_coding	fructose bisphosphatase 1
chr13	63016933	63018980	-	63012981	63018980	A3SS	0.5	50	50	ENSMUST00000150013.2	ENSMUSG00000069805.11	Fbp1	chr13	protein_coding	fructose bisphosphatase 1
chr13	63012981	63015153	-	63012981	63018980	A5SS	0.5	50	50	ENSMUST00000150013.2	ENSMUSG00000069805.11	Fbp1	chr13	protein_coding	fructose bisphosphatase 1
chr13	63216099	63318755	+	63216099;63304549	63304360;63318755	ES	0.5	50	50	ENSMUST00000091560.11	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63388145	63444672	+	63388145;63430072	63429956;63444672	ES	0.33	50	50	ENSMUST00000091560.11	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63430072;63444650	63444638;63444672	+	63430072	63444672	cassetteExon	0.5	100	100	ENSMUST00000091560.11	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63181003	63208855	+	63181003	63208849	A3SS	0.5	50	50	ENSMUST00000091560.11	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63357980	63362257	+	63357980	63387901	A3SS	0.33	50	50	ENSMUST00000091560.11	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63388145	63388339	+	63388145	63429956	A3SS	0.25	50	50	ENSMUST00000091560.11	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63388145	63388538	+	63388145	63429956	A3SS	0.25	50	50	ENSMUST00000091560.11	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63430072	63434629	+	63430072	63444672	A3SS	0.25	50	50	ENSMUST00000091560.11	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63430072	63442827	+	63430072	63444672	A3SS	0.25	50	50	ENSMUST00000091560.11	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63255504	63304360	+	63216099	63304360	A5SS	0.33	50	50	ENSMUST00000091560.11	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63299413	63304360	+	63216099	63304360	A5SS	0.33	50	50	ENSMUST00000091560.11	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63421163	63429956	+	63388145	63429956	A5SS	0.2	50	50	ENSMUST00000091560.11	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63421222	63429956	+	63388145	63429956	A5SS	0.2	50	50	ENSMUST00000091560.11	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63427004	63429956	+	63388145	63429956	A5SS	0.2	50	50	ENSMUST00000091560.11	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63446670	63471593	+	63446670	63449593	3pMXE	0.25	50	50	ENSMUST00000021911.15	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63446670;63449120	63448936;63449593	+	63446670	63449593	cassetteExon	0.5	100	100	ENSMUST00000021911.15	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63446670;63449207	63448936;63449593	+	63446670	63449593	cassetteExon	0.5	100	100	ENSMUST00000021911.15	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63446670	63448419	+	63446670	63449593	A3SS	0.25	50	50	ENSMUST00000021911.15	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63299413	63304360	+	63255504	63304360	A5SS	0.33	50	50	ENSMUST00000222907.2	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63357980;63388145	63387901;63429956	+	63357980	63429956	cassetteExon	0.5	100	100	ENSMUST00000222282.2	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63357980;63388145	63387901;63444672	+	63357980;63430072	63429956;63444672	MXE	0.5	100	100	ENSMUST00000222282.2	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63357980	63362257	+	63357980	63429956	A3SS	0.33	50	50	ENSMUST00000222282.2	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63421163	63429956	+	63357980	63429956	A5SS	0.2	50	50	ENSMUST00000222282.2	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63421222	63429956	+	63357980	63429956	A5SS	0.2	50	50	ENSMUST00000222282.2	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63427004	63429956	+	63357980	63429956	A5SS	0.2	50	50	ENSMUST00000222282.2	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63388145	63444672	+	63388145	63388538	3pMXE	0.25	50	50	ENSMUST00000221938.2	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63388145	63388339	+	63388145	63388538	A3SS	0.25	50	50	ENSMUST00000221938.2	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63430072	63442827	+	63430072	63434629	3pMXE	0.25	50	50	ENSMUST00000222680.2	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63430072	63444638	+	63430072	63434629	3pMXE	0.25	50	50	ENSMUST00000222680.2	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63388145	63444672	+	63388145	63388339	3pMXE	0.25	50	50	ENSMUST00000220563.2	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63430072	63442827	+	63430072	63444638	A3SS	0.25	50	50	ENSMUST00000223185.2	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63446670	63448419	+	63446670	63471593	A3SS	0.25	50	50	ENSMUST00000159152.3	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63446670	63448936	+	63446670	63471593	A3SS	0.25	50	50	ENSMUST00000159152.3	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63444650	63444672	+	63388145	63444672	A5SS	0.33	50	50	ENSMUST00000221820.2	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63446670	63448936	+	63446670;63448607	63448419;63448936	ES	0.5	50	50	ENSMUST00000220884.2	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63420919	63421040	+	63420470	63421040	A5SS	0.5	50	50	ENSMUST00000220885.2	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63421222	63429956	+	63421163	63429956	A5SS	0.33	50	50	ENSMUST00000220885.2	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63427004	63429956	+	63421163	63429956	A5SS	0.33	50	50	ENSMUST00000220885.2	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63427004	63429956	+	63421222	63429956	A5SS	0.2	50	50	ENSMUST00000223204.2	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63388145	63444672	+	63430072	63444672	5pMXE	0.33	50	50	ENSMUST00000221501.2	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63449207	63449593	+	63449120	63449593	A5SS	0.33	50	50	ENSMUST00000220485.2	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63446670	63449593	+	63449207	63449593	5pMXE	0.33	50	50	ENSMUST00000222846.2	ENSMUSG00000021458.18	Aopep	chr13	protein_coding	aminopeptidase O
chr13	63488289	63508010	-	63488289;63495398	63495234;63508010	ES	0.5	50	50	ENSMUST00000220684.2	ENSMUSG00000021461.18	Fancc	chr13	protein_coding	Fanconi anemia, complementation group C
chr13	63548132	63579264	-	63548132;63550852	63550656;63579264	ES	0.33	50	50	ENSMUST00000220684.2	ENSMUSG00000021461.18	Fancc	chr13	protein_coding	Fanconi anemia, complementation group C
chr13	63550852	63644915	-	63550852	63579264	5pMXE	0.2	50	50	ENSMUST00000220684.2	ENSMUSG00000021461.18	Fancc	chr13	protein_coding	Fanconi anemia, complementation group C
chr13	63465370	63473365	-	63471303	63473365	A3SS&ES	0.5	50	50	ENSMUST00000220684.2	ENSMUSG00000021461.18	Fancc	chr13	protein_coding	Fanconi anemia, complementation group C
chr13	63471303	63472724	-	63471303	63473365	A5SS	0.5	50	50	ENSMUST00000220684.2	ENSMUSG00000021461.18	Fancc	chr13	protein_coding	Fanconi anemia, complementation group C
chr13	63495398	63499899	-	63495398	63508010	A5SS	0.5	50	50	ENSMUST00000220684.2	ENSMUSG00000021461.18	Fancc	chr13	protein_coding	Fanconi anemia, complementation group C
chr13	63550852	63553911	-	63550852	63579264	A5SS	0.2	50	50	ENSMUST00000220684.2	ENSMUSG00000021461.18	Fancc	chr13	protein_coding	Fanconi anemia, complementation group C
chr13	63550852	63578899	-	63550852	63579264	A5SS	0.2	50	50	ENSMUST00000220684.2	ENSMUSG00000021461.18	Fancc	chr13	protein_coding	Fanconi anemia, complementation group C
chr13	63550852	63579243	-	63550852	63579264	A5SS	0.2	50	50	ENSMUST00000220684.2	ENSMUSG00000021461.18	Fancc	chr13	protein_coding	Fanconi anemia, complementation group C
chr13	63460617;63465096	63464998;63465167	-	63460617	63465167	cassetteExon	0.5	100	100	ENSMUST00000073029.13	ENSMUSG00000021461.18	Fancc	chr13	protein_coding	Fanconi anemia, complementation group C
chr13	63459691	63460477	-	63453682	63460477	A3SS	0.5	50	50	ENSMUST00000073029.13	ENSMUSG00000021461.18	Fancc	chr13	protein_coding	Fanconi anemia, complementation group C
chr13	63469476	63469681	-	63465370	63469681	A3SS	0.5	50	50	ENSMUST00000073029.13	ENSMUSG00000021461.18	Fancc	chr13	protein_coding	Fanconi anemia, complementation group C
chr13	63465370	63469681	-	63465370	63473365	A5SS	0.5	50	50	ENSMUST00000160333.8	ENSMUSG00000021461.18	Fancc	chr13	protein_coding	Fanconi anemia, complementation group C
chr13	63509506	63579264	-	63509506	63545897	5pMXE	0.5	50	50	ENSMUST00000160735.8	ENSMUSG00000021461.18	Fancc	chr13	protein_coding	Fanconi anemia, complementation group C
chr13	63488289	63508010	-	63495398	63508010	3pMXE	0.5	50	50	ENSMUST00000162971.8	ENSMUSG00000021461.18	Fancc	chr13	protein_coding	Fanconi anemia, complementation group C
chr13	63550852	63579243	-	63550852	63578899	5pMXE	0.2	50	50	ENSMUST00000162971.8	ENSMUSG00000021461.18	Fancc	chr13	protein_coding	Fanconi anemia, complementation group C
chr13	63550852	63644915	-	63550852	63578899	5pMXE	0.2	50	50	ENSMUST00000162971.8	ENSMUSG00000021461.18	Fancc	chr13	protein_coding	Fanconi anemia, complementation group C
chr13	63550852	63553911	-	63550852	63578899	A5SS	0.2	50	50	ENSMUST00000162971.8	ENSMUSG00000021461.18	Fancc	chr13	protein_coding	Fanconi anemia, complementation group C
chr13	63550852	63579243	-	63550852	63553911	5pMXE	0.2	50	50	ENSMUST00000162375.8	ENSMUSG00000021461.18	Fancc	chr13	protein_coding	Fanconi anemia, complementation group C
chr13	63550852	63644915	-	63550852	63553911	5pMXE	0.2	50	50	ENSMUST00000162375.8	ENSMUSG00000021461.18	Fancc	chr13	protein_coding	Fanconi anemia, complementation group C
chr13	63548132	63579264	-	63548132	63550656	A5SS&ES	0.5	50	50	ENSMUST00000159024.2	ENSMUSG00000021461.18	Fancc	chr13	protein_coding	Fanconi anemia, complementation group C
chr13	63550852	63579243	-	63550852	63644915	A5SS	0.2	50	50	ENSMUST00000159024.2	ENSMUSG00000021461.18	Fancc	chr13	protein_coding	Fanconi anemia, complementation group C
chr13	63548132	63579264	-	63509506	63579264	A3SS	0.33	50	50	ENSMUST00000221054.2	ENSMUSG00000021461.18	Fancc	chr13	protein_coding	Fanconi anemia, complementation group C
chr13	63550852	63579264	-	63509506	63579264	A3SS	0.33	50	50	ENSMUST00000221054.2	ENSMUSG00000021461.18	Fancc	chr13	protein_coding	Fanconi anemia, complementation group C
chr13	63481159;63486455	63486209;63487420	+	63481159	63487420	cassetteExon	0.5	100	100	ENSMUST00000160278.3	ENSMUSG00000089854.3	Gm16133	chr13	lncRNA	predicted gene 16133
chr13	63711629	63720906	-	63711629	63713176	5pMXE	0.16	50	50	ENSMUST00000021921.11	ENSMUSG00000021466.13	Ptch1	chr13	protein_coding	patched 1
chr13	63711629	63721064	-	63711629	63713176	5pMXE	0.16	50	50	ENSMUST00000021921.11	ENSMUSG00000021466.13	Ptch1	chr13	protein_coding	patched 1
chr13	63682222;63685422	63685296;63687047	-	63682222	63687047	cassetteExon	0.5	100	100	ENSMUST00000021921.11	ENSMUSG00000021466.13	Ptch1	chr13	protein_coding	patched 1
chr13	63711629	63712106	-	63711629	63713176	A5SS	0.16	50	50	ENSMUST00000021921.11	ENSMUSG00000021466.13	Ptch1	chr13	protein_coding	patched 1
chr13	63711629	63712272	-	63711629	63713176	A5SS	0.16	50	50	ENSMUST00000021921.11	ENSMUSG00000021466.13	Ptch1	chr13	protein_coding	patched 1
chr13	63711629	63713014	-	63711629	63713176	A5SS	0.16	50	50	ENSMUST00000021921.11	ENSMUSG00000021466.13	Ptch1	chr13	protein_coding	patched 1
chr13	63711629	63712106	-	63711629	63720906	A5SS	0.16	50	50	ENSMUST00000194663.6	ENSMUSG00000021466.13	Ptch1	chr13	protein_coding	patched 1
chr13	63711629	63712272	-	63711629	63720906	A5SS	0.16	50	50	ENSMUST00000194663.6	ENSMUSG00000021466.13	Ptch1	chr13	protein_coding	patched 1
chr13	63711629	63713014	-	63711629	63720906	A5SS	0.16	50	50	ENSMUST00000194663.6	ENSMUSG00000021466.13	Ptch1	chr13	protein_coding	patched 1
chr13	63711629	63721064	-	63711629	63720906	A5SS	0.16	50	50	ENSMUST00000194663.6	ENSMUSG00000021466.13	Ptch1	chr13	protein_coding	patched 1
chr13	63691502;63693120	63692850;63695810	-	63691502	63695810	cassetteExon	0.5	100	100	ENSMUST00000195258.7	ENSMUSG00000021466.13	Ptch1	chr13	protein_coding	patched 1
chr13	63711629	63713014	-	63711629	63712272	5pMXE	0.16	50	50	ENSMUST00000192155.6	ENSMUSG00000021466.13	Ptch1	chr13	protein_coding	patched 1
chr13	63711629	63721064	-	63711629	63712272	5pMXE	0.16	50	50	ENSMUST00000192155.6	ENSMUSG00000021466.13	Ptch1	chr13	protein_coding	patched 1
chr13	63711629	63712106	-	63711629	63712272	A5SS	0.16	50	50	ENSMUST00000192155.6	ENSMUSG00000021466.13	Ptch1	chr13	protein_coding	patched 1
chr13	63711629	63713014	-	63711629	63712106	5pMXE	0.16	50	50	ENSMUST00000195756.6	ENSMUSG00000021466.13	Ptch1	chr13	protein_coding	patched 1
chr13	63711629	63721064	-	63711629	63712106	5pMXE	0.16	50	50	ENSMUST00000195756.6	ENSMUSG00000021466.13	Ptch1	chr13	protein_coding	patched 1
chr13	63711629	63721064	-	63711629	63713014	5pMXE	0.16	50	50	ENSMUST00000193953.6	ENSMUSG00000021466.13	Ptch1	chr13	protein_coding	patched 1
chr13	63772624	63774279	-	63769775	63774279	A3SS	0.5	50	50	ENSMUST00000223134.2	ENSMUSG00000113453.2	Gm30709	chr13	lncRNA	predicted gene, 30709
chr13	63774481	63775027	-	63774429	63775027	A3SS	0.5	50	50	ENSMUST00000223134.2	ENSMUSG00000113453.2	Gm30709	chr13	lncRNA	predicted gene, 30709
chr13	63769775	63770181	-	63769775	63774279	A5SS	0.5	50	50	ENSMUST00000223134.2	ENSMUSG00000113453.2	Gm30709	chr13	lncRNA	predicted gene, 30709
chr13	63823786	63871926	-	63823786	63825227	5pMXE	0.33	50	50	ENSMUST00000221859.2	ENSMUSG00000113825.2	1700024I08Rik	chr13	lncRNA	RIKEN cDNA 1700024I08 gene
chr13	63823786;63825022	63824915;63825227	-	63823786	63825227	cassetteExon	0.5	100	100	ENSMUST00000221859.2	ENSMUSG00000113825.2	1700024I08Rik	chr13	lncRNA	RIKEN cDNA 1700024I08 gene
chr13	63823786	63824915	-	63823786	63871926	A5SS	0.33	50	50	ENSMUST00000222372.2	ENSMUSG00000113825.2	1700024I08Rik	chr13	lncRNA	RIKEN cDNA 1700024I08 gene
chr13	63972742	63989238	+	63972742;63982603	63982410;63989238	ES	0.33	50	50	ENSMUST00000021926.13	ENSMUSG00000021470.20	Ercc6l2	chr13	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2
chr13	63996674	64001442	+	63996674;64000836	64000765;64001442	ES	0.5	50	50	ENSMUST00000021926.13	ENSMUSG00000021470.20	Ercc6l2	chr13	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2
chr13	63963331;63967869	63967445;63972623	+	63963331	63972623	cassetteExon	0.5	100	100	ENSMUST00000021926.13	ENSMUSG00000021470.20	Ercc6l2	chr13	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2
chr13	63982603;63988853	63988707;63989238	+	63982603	63989238	cassetteExon	0.5	100	100	ENSMUST00000021926.13	ENSMUSG00000021470.20	Ercc6l2	chr13	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2
chr13	63982603	63984235	+	63982603	63989238	A3SS	0.33	50	50	ENSMUST00000021926.13	ENSMUSG00000021470.20	Ercc6l2	chr13	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2
chr13	63963331	63967445	+	63963624	63967445	A5SS	0.5	50	50	ENSMUST00000095724.11	ENSMUSG00000021470.20	Ercc6l2	chr13	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2
chr13	63963331	63972623	+	63967869	63972623	A5SS&ES	0.5	50	50	ENSMUST00000095724.11	ENSMUSG00000021470.20	Ercc6l2	chr13	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2
chr13	64039225	64042452	+	64025347	64042452	A5SS	0.5	50	50	ENSMUST00000095724.11	ENSMUSG00000021470.20	Ercc6l2	chr13	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2
chr13	63982603	63988707	+	63982603	63984235	3pMXE	0.33	50	50	ENSMUST00000144763.2	ENSMUSG00000021470.20	Ercc6l2	chr13	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2
chr13	63988853	63989238	+	63972742	63989238	A5SS	0.33	50	50	ENSMUST00000159957.9	ENSMUSG00000021470.20	Ercc6l2	chr13	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2
chr13	64211200	64212163	-	64210983	64212163	A3SS	0.5	50	50	ENSMUST00000222783.2	ENSMUSG00000033122.15	Hsd17b3	chr13	protein_coding	hydroxysteroid (17-beta) dehydrogenase 3
chr13	64206233	64206374	-	64206233	64206373	A5SS	0.5	50	50	ENSMUST00000222783.2	ENSMUSG00000033122.15	Hsd17b3	chr13	protein_coding	hydroxysteroid (17-beta) dehydrogenase 3
chr13	64245498	64247084	-	64245498;64246211	64246129;64247084	ES	0.5	50	50	ENSMUST00000099441.6	ENSMUSG00000033114.12	Slc35d2	chr13	protein_coding	solute carrier family 35, member D2
chr13	64260815	64268409	-	64260815;64266297	64266230;64268409	ES	0.5	50	50	ENSMUST00000099441.6	ENSMUSG00000033114.12	Slc35d2	chr13	protein_coding	solute carrier family 35, member D2
chr13	64268495	64277000	-	64268495;64270166	64270133;64277000	ES	0.25	50	50	ENSMUST00000099441.6	ENSMUSG00000033114.12	Slc35d2	chr13	protein_coding	solute carrier family 35, member D2
chr13	64270166;64274655	64274565;64277000	-	64270166	64277000	cassetteExon	0.5	100	100	ENSMUST00000099441.6	ENSMUSG00000033114.12	Slc35d2	chr13	protein_coding	solute carrier family 35, member D2
chr13	64249919	64252547	-	64247162	64252547	A3SS	0.5	50	50	ENSMUST00000099441.6	ENSMUSG00000033114.12	Slc35d2	chr13	protein_coding	solute carrier family 35, member D2
chr13	64274655	64277000	-	64268495	64277000	A3SS	0.25	50	50	ENSMUST00000222794.2	ENSMUSG00000033114.12	Slc35d2	chr13	protein_coding	solute carrier family 35, member D2
chr13	64260815;64268495	64268409;64277000	-	64260815	64277000	cassetteExon	0.5	100	100	ENSMUST00000222866.2	ENSMUSG00000033114.12	Slc35d2	chr13	protein_coding	solute carrier family 35, member D2
chr13	64270166	64277000	-	64260815	64277000	A3SS	0.25	50	50	ENSMUST00000222866.2	ENSMUSG00000033114.12	Slc35d2	chr13	protein_coding	solute carrier family 35, member D2
chr13	64274655	64277000	-	64260815	64277000	A3SS	0.25	50	50	ENSMUST00000222866.2	ENSMUSG00000033114.12	Slc35d2	chr13	protein_coding	solute carrier family 35, member D2
chr13	64260815	64266230	-	64260815	64277000	A5SS	0.33	50	50	ENSMUST00000222866.2	ENSMUSG00000033114.12	Slc35d2	chr13	protein_coding	solute carrier family 35, member D2
chr13	64293494	64297884	-	64293494	64300414	A5SS	0.33	50	50	ENSMUST00000059817.12	ENSMUSG00000044934.14	Zfp367	chr13	protein_coding	zinc finger protein 367
chr13	64293494	64300203	-	64293494	64300414	A5SS	0.33	50	50	ENSMUST00000059817.12	ENSMUSG00000044934.14	Zfp367	chr13	protein_coding	zinc finger protein 367
chr13	64293494	64297884	-	64293494	64300203	A5SS	0.33	50	50	ENSMUST00000152644.9	ENSMUSG00000044934.14	Zfp367	chr13	protein_coding	zinc finger protein 367
chr13	64310148	64311051	+	64310148	64317828	A3SS	0.5	50	50	ENSMUST00000221904.2	ENSMUSG00000021476.10	Habp4	chr13	protein_coding	hyaluronic acid binding protein 4
chr13	64317990	64320534	+	64317990	64321877	A3SS	0.5	50	50	ENSMUST00000221904.2	ENSMUSG00000021476.10	Habp4	chr13	protein_coding	hyaluronic acid binding protein 4
chr13	64322659	64323819	+	64322672	64323819	A5SS	0.5	50	50	ENSMUST00000221904.2	ENSMUSG00000021476.10	Habp4	chr13	protein_coding	hyaluronic acid binding protein 4
chr13	64349262;64353231	64353085;64356921	-	64349262	64356921	cassetteExon	0.5	100	100	ENSMUST00000221634.2	ENSMUSG00000033102.16	Cdc14b	chr13	protein_coding	CDC14 cell division cycle 14B
chr13	64349262;64353397	64353085;64356921	-	64349262	64356921	cassetteExon	0.5	100	100	ENSMUST00000221634.2	ENSMUSG00000033102.16	Cdc14b	chr13	protein_coding	CDC14 cell division cycle 14B
chr13	64344489	64349146	-	64338166	64349146	A3SS	0.33	50	50	ENSMUST00000221634.2	ENSMUSG00000033102.16	Cdc14b	chr13	protein_coding	CDC14 cell division cycle 14B
chr13	64344859	64349146	-	64338166	64349146	A3SS	0.33	50	50	ENSMUST00000221634.2	ENSMUSG00000033102.16	Cdc14b	chr13	protein_coding	CDC14 cell division cycle 14B
chr13	64358147	64359982	-	64358147	64363314	A5SS	0.5	50	50	ENSMUST00000221634.2	ENSMUSG00000033102.16	Cdc14b	chr13	protein_coding	CDC14 cell division cycle 14B
chr13	64395132	64396219	-	64395132	64422405	A5SS	0.5	50	50	ENSMUST00000221634.2	ENSMUSG00000033102.16	Cdc14b	chr13	protein_coding	CDC14 cell division cycle 14B
chr13	64344489;64349262	64349146;64353085	-	64344489	64353085	cassetteExon	0.5	100	100	ENSMUST00000039318.16	ENSMUSG00000033102.16	Cdc14b	chr13	protein_coding	CDC14 cell division cycle 14B
chr13	64344489;64349262	64349146;64356921	-	64344489;64353231	64353085;64356921	MXE	0.5	100	100	ENSMUST00000039318.16	ENSMUSG00000033102.16	Cdc14b	chr13	protein_coding	CDC14 cell division cycle 14B
chr13	64344489;64353397	64353312;64356921	-	64344489;64353231	64353085;64356921	MXE	0.5	100	100	ENSMUST00000039318.16	ENSMUSG00000033102.16	Cdc14b	chr13	protein_coding	CDC14 cell division cycle 14B
chr13	64344489	64344794	-	64344489	64353085	A5SS	0.25	50	50	ENSMUST00000039318.16	ENSMUSG00000033102.16	Cdc14b	chr13	protein_coding	CDC14 cell division cycle 14B
chr13	64344489;64344859	64344794;64349146	-	64344489	64349146	cassetteExon	0.5	100	100	ENSMUST00000221139.2	ENSMUSG00000033102.16	Cdc14b	chr13	protein_coding	CDC14 cell division cycle 14B
chr13	64344489;64353397	64353312;64356921	-	64344489;64353231	64349146;64356921	MXE	0.5	100	100	ENSMUST00000221139.2	ENSMUSG00000033102.16	Cdc14b	chr13	protein_coding	CDC14 cell division cycle 14B
chr13	64344489;64349262	64349146;64356921	-	64344489;64353397	64353312;64356921	MXE	0.5	100	100	ENSMUST00000222713.2	ENSMUSG00000033102.16	Cdc14b	chr13	protein_coding	CDC14 cell division cycle 14B
chr13	64344489	64344794	-	64344489	64353312	A5SS	0.25	50	50	ENSMUST00000222713.2	ENSMUSG00000033102.16	Cdc14b	chr13	protein_coding	CDC14 cell division cycle 14B
chr13	64344489;64353397	64353312;64356921	-	64344489;64353231	64344794;64356921	MXE	0.5	100	100	ENSMUST00000221217.2	ENSMUSG00000033102.16	Cdc14b	chr13	protein_coding	CDC14 cell division cycle 14B
chr13	64344489;64353231	64353085;64356921	-	64344489;64349262	64344794;64356921	MXE	0.5	100	100	ENSMUST00000222766.2	ENSMUSG00000033102.16	Cdc14b	chr13	protein_coding	CDC14 cell division cycle 14B
chr13	64344489;64353397	64353085;64356921	-	64344489;64349262	64344794;64356921	MXE	0.5	100	100	ENSMUST00000222766.2	ENSMUSG00000033102.16	Cdc14b	chr13	protein_coding	CDC14 cell division cycle 14B
chr13	64344489;64353397	64353312;64356921	-	64344489;64349262	64344794;64356921	MXE	0.5	100	100	ENSMUST00000222766.2	ENSMUSG00000033102.16	Cdc14b	chr13	protein_coding	CDC14 cell division cycle 14B
chr13	64344489;64353397	64353085;64356921	-	64344489;64349262	64349146;64356921	MXE	0.5	100	100	ENSMUST00000223116.2	ENSMUSG00000033102.16	Cdc14b	chr13	protein_coding	CDC14 cell division cycle 14B
chr13	64414363	64419227	+	64414363	64414835	3pMXE	0.33	50	50	ENSMUST00000181403.3	ENSMUSG00000097101.4	1810034E14Rik	chr13	lncRNA	RIKEN cDNA 1810034E14 gene
chr13	64397017	64414256	+	64397017	64414191	A3SS	0.5	50	50	ENSMUST00000181403.3	ENSMUSG00000097101.4	1810034E14Rik	chr13	lncRNA	RIKEN cDNA 1810034E14 gene
chr13	64414363	64415783	+	64414363	64414835	A3SS	0.33	50	50	ENSMUST00000181403.3	ENSMUSG00000097101.4	1810034E14Rik	chr13	lncRNA	RIKEN cDNA 1810034E14 gene
chr13	64414363	64415783	+	64414363	64419227	A3SS	0.33	50	50	ENSMUST00000222277.2	ENSMUSG00000097101.4	1810034E14Rik	chr13	lncRNA	RIKEN cDNA 1810034E14 gene
chr13	64423670	64456636	-	64423670	64427434	5pMXE	0.5	50	50	ENSMUST00000221399.2	ENSMUSG00000021482.11	Prxl2c	chr13	protein_coding	peroxiredoxin like 2C
chr13	64456741	64460081	-	64456741;64456960	64456907;64460081	ES	0.5	50	50	ENSMUST00000221118.2	ENSMUSG00000021482.11	Prxl2c	chr13	protein_coding	peroxiredoxin like 2C
chr13	64440042	64456636	-	64423670	64456636	A3SS	0.33	50	50	ENSMUST00000221118.2	ENSMUSG00000021482.11	Prxl2c	chr13	protein_coding	peroxiredoxin like 2C
chr13	64445200	64456636	-	64423670	64456636	A3SS	0.33	50	50	ENSMUST00000221118.2	ENSMUSG00000021482.11	Prxl2c	chr13	protein_coding	peroxiredoxin like 2C
chr13	64440042	64456636	-	64440042;64445200	64445069;64456636	ES	0.5	50	50	ENSMUST00000222570.2	ENSMUSG00000021482.11	Prxl2c	chr13	protein_coding	peroxiredoxin like 2C
chr13	64514738	64515674	-	64514906	64515674	A3SS	0.5	50	50	ENSMUST00000222517.2	ENSMUSG00000021477.10	Ctsl	chr13	protein_coding	cathepsin L
chr13	64518334	64518520	-	64518334	64518599	A5SS	0.5	50	50	ENSMUST00000222517.2	ENSMUSG00000021477.10	Ctsl	chr13	protein_coding	cathepsin L
chr13	64584417	64584580	+	64584428	64584580	A5SS	0.33	50	50	ENSMUST00000021939.8	ENSMUSG00000021483.9	Cdk20	chr13	protein_coding	cyclin-dependent kinase 20
chr13	64584494	64584580	+	64584428	64584580	A5SS	0.33	50	50	ENSMUST00000021939.8	ENSMUSG00000021483.9	Cdk20	chr13	protein_coding	cyclin-dependent kinase 20
chr13	64584660	64585203	+	64584642	64585203	A5SS	0.5	50	50	ENSMUST00000021939.8	ENSMUSG00000021483.9	Cdk20	chr13	protein_coding	cyclin-dependent kinase 20
chr13	64584494	64584580	+	64584417	64584580	A5SS	0.33	50	50	ENSMUST00000222576.2	ENSMUSG00000021483.9	Cdk20	chr13	protein_coding	cyclin-dependent kinase 20
chr13	64597552	64611727	+	64597552	64654482	A3SS	0.5	50	50	ENSMUST00000221181.2	ENSMUSG00000113244.2	Gm31218	chr13	lncRNA	predicted gene, 31218
chr13	65065479	65068110	+	65065479;65067595	65067523;65068110	ES	0.5	50	50	ENSMUST00000070216.9	ENSMUSG00000056223.9	Spata31	chr13	protein_coding	spermatogenesis associated 31
chr13	65197306;65199612	65199450;65200001	-	65197306	65200001	cassetteExon	0.5	100	100	ENSMUST00000220767.2	ENSMUSG00000090658.8	Prss47	chr13	protein_coding	protease, serine 47
chr13	65197306	65200001	-	65197306	65199450	A5SS&ES	0.5	50	50	ENSMUST00000203968.3	ENSMUSG00000090658.8	Prss47	chr13	protein_coding	protease, serine 47
chr13	65260472	65260568	-	65260472	65260570	A5SS	0.5	50	50	ENSMUST00000054730.10	ENSMUSG00000038212.17	Mfsd14b	chr13	protein_coding	major facilitator superfamily domain containing 14B
chr13	65329516	65332777	-	65329516;65330887	65330717;65332777	ES	0.5	50	50	ENSMUST00000037372.8	ENSMUSG00000032999.11	Nlrp4f	chr13	protein_coding	NLR family, pyrin domain containing 4F
chr13	65330927	65335255	-	65332947	65335255	A3SS&ES	0.5	50	50	ENSMUST00000037372.8	ENSMUSG00000032999.11	Nlrp4f	chr13	protein_coding	NLR family, pyrin domain containing 4F
chr13	65347237	65353434	-	65347284	65353434	A3SS	0.5	50	50	ENSMUST00000037372.8	ENSMUSG00000032999.11	Nlrp4f	chr13	protein_coding	NLR family, pyrin domain containing 4F
chr13	65325477	65329411	-	65325477	65329343	A5SS	0.5	50	50	ENSMUST00000037372.8	ENSMUSG00000032999.11	Nlrp4f	chr13	protein_coding	NLR family, pyrin domain containing 4F
chr13	65329516;65332947	65332777;65335255	-	65329516;65330927	65330717;65335255	MXE	0.5	100	100	ENSMUST00000222514.2	ENSMUSG00000032999.11	Nlrp4f	chr13	protein_coding	NLR family, pyrin domain containing 4F
chr13	65353530	65353711	-	65353530	65353629	A5SS	0.33	50	50	ENSMUST00000222514.2	ENSMUSG00000032999.11	Nlrp4f	chr13	protein_coding	NLR family, pyrin domain containing 4F
chr13	65353530	65353753	-	65353530	65353629	A5SS	0.33	50	50	ENSMUST00000222514.2	ENSMUSG00000032999.11	Nlrp4f	chr13	protein_coding	NLR family, pyrin domain containing 4F
chr13	65353530	65353711	-	65353530	65353753	A5SS	0.33	50	50	ENSMUST00000221659.2	ENSMUSG00000032999.11	Nlrp4f	chr13	protein_coding	NLR family, pyrin domain containing 4F
chr13	65389829	65395256	+	65389829	65395455	A3SS	0.5	50	50	ENSMUST00000210653.2	ENSMUSG00000110393.3	Gm36445	chr13	lncRNA	predicted gene, 36445
chr13	65389986	65395455	+	65389829	65395455	A5SS	0.5	50	50	ENSMUST00000210653.2	ENSMUSG00000110393.3	Gm36445	chr13	lncRNA	predicted gene, 36445
chr13	65389986	65395256	+	65389829	65395256	A5SS	0.5	50	50	ENSMUST00000209855.2	ENSMUSG00000110393.3	Gm36445	chr13	lncRNA	predicted gene, 36445
chr13	65389986	65395256	+	65389986	65395455	A3SS	0.5	50	50	ENSMUST00000209344.3	ENSMUSG00000110393.3	Gm36445	chr13	lncRNA	predicted gene, 36445
chr13	65443540	65451632	+	65443540	65443877	3pMXE	0.5	50	50	ENSMUST00000126879.8	ENSMUSG00000021514.19	Zfp369	chr13	protein_coding	zinc finger protein 369
chr13	65426912	65427075	+	65426801	65427075	A5SS	0.5	50	50	ENSMUST00000126879.8	ENSMUSG00000021514.19	Zfp369	chr13	protein_coding	zinc finger protein 369
chr13	66027841	66034037	+	66027838	66034037	A5SS	0.5	50	50	ENSMUST00000221276.2	ENSMUSG00000113945.2	Vmn2r-ps99	chr13	transcribed_unprocessed_pseudogene	vomeronasal 2, receptor, pseudogene 99
chr13	66126978	66130494	-	66126978;66128629	66128414;66130494	ES	0.5	50	50	ENSMUST00000221856.2	ENSMUSG00000113559.2	Gm40987	chr13	lncRNA	predicted gene, 40987
chr13	66125064	66127143	-	66125064	66126416	A5SS&ES	0.5	50	50	ENSMUST00000221856.2	ENSMUSG00000113559.2	Gm40987	chr13	lncRNA	predicted gene, 40987
chr13	66267363	66267451	+	66261374	66267451	A5SS	0.5	50	50	ENSMUST00000238355.2	ENSMUSG00000095909.3	Zfp997	chr13	protein_coding	zinc finger protein 997
chr13	66448444	66599298	+	66448444	66453084	3pMXE	0.5	50	50	ENSMUST00000224041.2	ENSMUSG00000114616.2	Gm26754	chr13	lncRNA	predicted gene, 26754
chr13	66500731	66501830	-	66500731	66501822	A5SS	0.5	50	50	ENSMUST00000234850.2	ENSMUSG00000094499.4	Vmn2r-ps104	chr13	transcribed_unprocessed_pseudogene	vomeronasal 2, receptor, pseudogene 104
chr13	66580290	66581479	-	66566879	66581479	A3SS	0.5	50	50	ENSMUST00000173583.8	ENSMUSG00000074832.12	Zfp998	chr13	protein_coding	zinc finger protein 998
chr13	66566879	66567630	-	66566879	66581479	A5SS	0.5	50	50	ENSMUST00000173583.8	ENSMUSG00000074832.12	Zfp998	chr13	protein_coding	zinc finger protein 998
chr13	66581866	66581954	-	66581866	66589081	A5SS	0.5	50	50	ENSMUST00000173583.8	ENSMUSG00000074832.12	Zfp998	chr13	protein_coding	zinc finger protein 998
chr13	66652034;66652874	66652808;66653162	-	66652034	66653162	cassetteExon	0.5	100	100	ENSMUST00000181516.2	ENSMUSG00000097483.3	Gm26806	chr13	lncRNA	predicted gene, 26806
chr13	66819454	66821008	-	66819368	66821008	A3SS	0.5	50	50	ENSMUST00000224116.2	ENSMUSG00000074830.5	Zfp640	chr13	transcribed_processed_pseudogene	zinc finger protein 640
chr13	66821068	66821268	-	66821068	66821270	A5SS	0.5	50	50	ENSMUST00000224116.2	ENSMUSG00000074830.5	Zfp640	chr13	transcribed_processed_pseudogene	zinc finger protein 640
chr13	67055373	67055945	+	67055373	67055822	A3SS	0.5	50	50	ENSMUST00000168767.9	ENSMUSG00000074826.11	Gm10767	chr13	protein_coding	predicted gene 10767
chr13	67053685	67055215	+	67053406	67055215	A5SS	0.5	50	50	ENSMUST00000168767.9	ENSMUSG00000074826.11	Gm10767	chr13	protein_coding	predicted gene 10767
chr13	67060442	67062691	-	67055247	67062691	A3SS	0.5	50	50	ENSMUST00000173891.8	ENSMUSG00000021519.12	Mterf3	chr13	protein_coding	mitochondrial transcription termination factor 3
chr13	67065237	67076234	-	67065237;67071009	67070820;67076234	ES	0.5	50	50	ENSMUST00000021991.11	ENSMUSG00000021519.12	Mterf3	chr13	protein_coding	mitochondrial transcription termination factor 3
chr13	67078287;67079722	67079670;67080999	-	67078287	67080999	cassetteExon	0.5	100	100	ENSMUST00000021991.11	ENSMUSG00000021519.12	Mterf3	chr13	protein_coding	mitochondrial transcription termination factor 3
chr13	67065232	67070820	-	67065237	67070820	A3SS	0.5	50	50	ENSMUST00000021991.11	ENSMUSG00000021519.12	Mterf3	chr13	protein_coding	mitochondrial transcription termination factor 3
chr13	67076351	67077949	-	67076386	67077949	A3SS	0.5	50	50	ENSMUST00000021991.11	ENSMUSG00000021519.12	Mterf3	chr13	protein_coding	mitochondrial transcription termination factor 3
chr13	67079367	67080999	-	67078287	67080999	A3SS	0.25	50	50	ENSMUST00000021991.11	ENSMUSG00000021519.12	Mterf3	chr13	protein_coding	mitochondrial transcription termination factor 3
chr13	67079371	67080999	-	67078287	67080999	A3SS	0.25	50	50	ENSMUST00000021991.11	ENSMUSG00000021519.12	Mterf3	chr13	protein_coding	mitochondrial transcription termination factor 3
chr13	67065237	67067577	-	67065237	67070820	A5SS	0.33	50	50	ENSMUST00000021991.11	ENSMUSG00000021519.12	Mterf3	chr13	protein_coding	mitochondrial transcription termination factor 3
chr13	67076386	67078226	-	67076386	67077949	A5SS	0.5	50	50	ENSMUST00000021991.11	ENSMUSG00000021519.12	Mterf3	chr13	protein_coding	mitochondrial transcription termination factor 3
chr13	67078287	67080458	-	67078287	67080999	A5SS	0.33	50	50	ENSMUST00000021991.11	ENSMUSG00000021519.12	Mterf3	chr13	protein_coding	mitochondrial transcription termination factor 3
chr13	67065237	67076234	-	67065237	67067577	5pMXE	0.33	50	50	ENSMUST00000174134.2	ENSMUSG00000021519.12	Mterf3	chr13	protein_coding	mitochondrial transcription termination factor 3
chr13	67078287	67079670	-	67078287	67080458	A5SS	0.33	50	50	ENSMUST00000173407.8	ENSMUSG00000021519.12	Mterf3	chr13	protein_coding	mitochondrial transcription termination factor 3
chr13	67065237	67076234	-	67071009	67076234	A3SS&ES	0.5	50	50	ENSMUST00000173910.2	ENSMUSG00000021519.12	Mterf3	chr13	protein_coding	mitochondrial transcription termination factor 3
chr13	67079722	67080999	-	67079722	67080847	5pMXE	0.5	50	50	ENSMUST00000172597.8	ENSMUSG00000021519.12	Mterf3	chr13	protein_coding	mitochondrial transcription termination factor 3
chr13	67079367	67080999	-	67079722	67080999	A3SS&ES	0.25	50	50	ENSMUST00000173773.2	ENSMUSG00000021519.12	Mterf3	chr13	protein_coding	mitochondrial transcription termination factor 3
chr13	67079371	67080999	-	67079722	67080999	A3SS&ES	0.25	50	50	ENSMUST00000173773.2	ENSMUSG00000021519.12	Mterf3	chr13	protein_coding	mitochondrial transcription termination factor 3
chr13	67079367	67080999	-	67079371	67080999	A3SS	0.25	50	50	ENSMUST00000172807.2	ENSMUSG00000021519.12	Mterf3	chr13	protein_coding	mitochondrial transcription termination factor 3
chr13	67081750	67101584	+	67081750;67093432	67093341;67101584	ES	0.5	50	50	ENSMUST00000021990.4	ENSMUSG00000021518.5	Ptdss1	chr13	protein_coding	phosphatidylserine synthase 1
chr13	67111535;67112272	67112138;67114454	+	67111535	67114454	cassetteExon	0.5	100	100	ENSMUST00000021990.4	ENSMUSG00000021518.5	Ptdss1	chr13	protein_coding	phosphatidylserine synthase 1
chr13	67101628	67104505	+	67101628	67104446	A3SS	0.5	50	50	ENSMUST00000021990.4	ENSMUSG00000021518.5	Ptdss1	chr13	protein_coding	phosphatidylserine synthase 1
chr13	67124875	67125695	+	67124875	67135818	A3SS	0.5	50	50	ENSMUST00000021990.4	ENSMUSG00000021518.5	Ptdss1	chr13	protein_coding	phosphatidylserine synthase 1
chr13	67081750	67101584	+	67093432	67101584	5pMXE	0.5	50	50	ENSMUST00000225347.2	ENSMUSG00000021518.5	Ptdss1	chr13	protein_coding	phosphatidylserine synthase 1
chr13	67209324	67239031	+	67209324	67224009	3pMXE	0.33	50	50	ENSMUST00000224641.2	ENSMUSG00000114516.2	Gm46440	chr13	lncRNA	predicted gene, 46440
chr13	67209324	67221586	+	67209324	67224009	A3SS	0.33	50	50	ENSMUST00000224641.2	ENSMUSG00000114516.2	Gm46440	chr13	lncRNA	predicted gene, 46440
chr13	67209324	67221586	+	67209324	67239031	A3SS	0.33	50	50	ENSMUST00000223904.2	ENSMUSG00000114516.2	Gm46440	chr13	lncRNA	predicted gene, 46440
chr13	67219592	67222897	-	67219592;67222245	67222150;67222897	ES	0.5	50	50	ENSMUST00000109742.11	ENSMUSG00000058883.17	Zfp708	chr13	protein_coding	zinc finger protein 708
chr13	67223023	67245857	-	67223023	67229514	5pMXE	0.5	50	50	ENSMUST00000109742.11	ENSMUSG00000058883.17	Zfp708	chr13	protein_coding	zinc finger protein 708
chr13	67222980	67229514	-	67223023	67229514	A3SS	0.5	50	50	ENSMUST00000109742.11	ENSMUSG00000058883.17	Zfp708	chr13	protein_coding	zinc finger protein 708
chr13	67254376	67256513	-	67250845	67256513	A3SS	0.5	50	50	ENSMUST00000186303.7	ENSMUSG00000100235.9	Gm28557	chr13	protein_coding	predicted gene 28557
chr13	67219592	67222897	-	67222245	67222897	3pMXE	0.5	50	50	ENSMUST00000185954.3	ENSMUSG00000100235.9	Gm28557	chr13	protein_coding	predicted gene 28557
chr13	67276378	67284782	+	67275064	67284782	A5SS	0.5	50	50	ENSMUST00000224346.2	ENSMUSG00000057396.8	Zfp759	chr13	protein_coding	zinc finger protein 759
chr13	67276378	67285374	+	67284908	67285374	A5SS&ES	0.5	50	50	ENSMUST00000224346.2	ENSMUSG00000057396.8	Zfp759	chr13	protein_coding	zinc finger protein 759
chr13	67276378;67284908	67284782;67285374	+	67276378	67285374	cassetteExon	0.5	100	100	ENSMUST00000224426.2	ENSMUSG00000057396.8	Zfp759	chr13	protein_coding	zinc finger protein 759
chr13	67321372	67324512	+	67321317	67324512	A5SS	0.5	50	50	ENSMUST00000021997.8	ENSMUSG00000058900.6	Rsl1	chr13	protein_coding	regulator of sex limited protein 1
chr13	67342658	67347213	+	67342658;67346723	67346597;67347213	ES	0.5	50	50	ENSMUST00000120861.8	ENSMUSG00000051037.16	Zfp455	chr13	protein_coding	zinc finger protein 455
chr13	67408307	67426493	-	67408307	67417095	5pMXE	0.33	50	50	ENSMUST00000045969.8	ENSMUSG00000055480.8	Zfp458	chr13	protein_coding	zinc finger protein 458
chr13	67408307	67416461	-	67408307	67417095	A5SS	0.33	50	50	ENSMUST00000045969.8	ENSMUSG00000055480.8	Zfp458	chr13	protein_coding	zinc finger protein 458
chr13	67408307	67416461	-	67408307	67426493	A5SS	0.33	50	50	ENSMUST00000225772.2	ENSMUSG00000055480.8	Zfp458	chr13	protein_coding	zinc finger protein 458
chr13	67426809	67427198	+	67426669	67427198	A5SS	0.5	50	50	ENSMUST00000224844.2	ENSMUSG00000114442.2	F630042J09Rik	chr13	lncRNA	RIKEN cDNA F630042J09 gene
chr13	67436541	67440810	-	67436541	67439519	5pMXE	0.5	50	50	ENSMUST00000225338.2	ENSMUSG00000055341.11	Zfp457	chr13	protein_coding	zinc finger protein 457
chr13	67443906	67454414	-	67443906;67444495	67444369;67454414	ES	0.5	50	50	ENSMUST00000049705.8	ENSMUSG00000055341.11	Zfp457	chr13	protein_coding	zinc finger protein 457
chr13	67469018	67493414	-	67469018	67480531	5pMXE	0.33	50	50	ENSMUST00000109735.9	ENSMUSG00000057842.15	Zfp595	chr13	protein_coding	zinc finger protein 595
chr13	67461962	67464362	-	67462973	67464362	A3SS	0.5	50	50	ENSMUST00000109735.9	ENSMUSG00000057842.15	Zfp595	chr13	protein_coding	zinc finger protein 595
chr13	67468431	67468856	-	67468431	67468892	A5SS	0.5	50	50	ENSMUST00000109735.9	ENSMUSG00000057842.15	Zfp595	chr13	protein_coding	zinc finger protein 595
chr13	67469018	67480398	-	67469018	67480531	A5SS	0.33	50	50	ENSMUST00000109735.9	ENSMUSG00000057842.15	Zfp595	chr13	protein_coding	zinc finger protein 595
chr13	67461962;67462973	67462710;67464362	-	67461962	67464362	cassetteExon	0.5	100	100	ENSMUST00000133177.3	ENSMUSG00000057842.15	Zfp595	chr13	protein_coding	zinc finger protein 595
chr13	67469018	67493414	-	67469018	67480398	5pMXE	0.33	50	50	ENSMUST00000171466.2	ENSMUSG00000057842.15	Zfp595	chr13	protein_coding	zinc finger protein 595
chr13	67496033	67510426	-	67496033	67508623	5pMXE	0.5	50	50	ENSMUST00000044819.7	ENSMUSG00000098781.2	Gm28044	chr13	protein_coding	predicted gene, 28044
chr13	67491721	67493414	-	67469018	67493414	A3SS	0.5	50	50	ENSMUST00000044819.7	ENSMUSG00000098781.2	Gm28044	chr13	protein_coding	predicted gene, 28044
chr13	67520996;67522366	67522238;67523765	-	67520996	67523765	cassetteExon	0.5	100	100	ENSMUST00000166080.2	ENSMUSG00000098692.2	Gm28041	chr13	protein_coding	predicted gene, 28041
chr13	67515484	67520296	-	67510566	67520296	A3SS	0.5	50	50	ENSMUST00000166080.2	ENSMUSG00000098692.2	Gm28041	chr13	protein_coding	predicted gene, 28041
chr13	67520996	67523809	-	67520996	67523765	A5SS	0.33	50	50	ENSMUST00000166080.2	ENSMUSG00000098692.2	Gm28041	chr13	protein_coding	predicted gene, 28041
chr13	67520996	67522238	-	67520996	67523809	A5SS	0.33	50	50	ENSMUST00000172266.8	ENSMUSG00000078995.11	Zfp456	chr13	protein_coding	zinc finger protein 456
chr13	67544875	67547893	-	67544875	67547815	5pMXE	0.5	50	50	ENSMUST00000224684.2	ENSMUSG00000078994.10	Zfp429	chr13	protein_coding	zinc finger protein 429
chr13	67539183;67542265	67542183;67544163	-	67539183	67544163	cassetteExon	0.5	100	100	ENSMUST00000224684.2	ENSMUSG00000078994.10	Zfp429	chr13	protein_coding	zinc finger protein 429
chr13	67562036	67569461	-	67562079	67569461	A3SS	0.5	50	50	ENSMUST00000056470.10	ENSMUSG00000055560.9	Zfp459	chr13	protein_coding	zinc finger protein 459
chr13	67562079	67569340	-	67562079	67569461	A5SS	0.5	50	50	ENSMUST00000056470.10	ENSMUSG00000055560.9	Zfp459	chr13	protein_coding	zinc finger protein 459
chr13	67579664;67591453	67591340;67596940	-	67579664	67596940	cassetteExon	0.5	100	100	ENSMUST00000057241.15	ENSMUSG00000069206.15	Zfp874a	chr13	protein_coding	zinc finger protein 874a
chr13	67573794	67579569	-	67574484	67579569	A3SS	0.33	50	50	ENSMUST00000057241.15	ENSMUSG00000069206.15	Zfp874a	chr13	protein_coding	zinc finger protein 874a
chr13	67577602	67579569	-	67574484	67579569	A3SS	0.33	50	50	ENSMUST00000057241.15	ENSMUSG00000069206.15	Zfp874a	chr13	protein_coding	zinc finger protein 874a
chr13	67595551	67596940	-	67579664	67596940	A3SS	0.33	50	50	ENSMUST00000057241.15	ENSMUSG00000069206.15	Zfp874a	chr13	protein_coding	zinc finger protein 874a
chr13	67591453;67595551	67595483;67596940	-	67591453	67596940	cassetteExon	0.5	100	100	ENSMUST00000225778.2	ENSMUSG00000069206.15	Zfp874a	chr13	protein_coding	zinc finger protein 874a
chr13	67577602	67579569	-	67573794	67579569	A3SS	0.33	50	50	ENSMUST00000225778.2	ENSMUSG00000069206.15	Zfp874a	chr13	protein_coding	zinc finger protein 874a
chr13	67591056	67591340	-	67579664	67591340	A3SS	0.5	50	50	ENSMUST00000225778.2	ENSMUSG00000069206.15	Zfp874a	chr13	protein_coding	zinc finger protein 874a
chr13	67591453	67596828	-	67591453	67596940	A5SS	0.33	50	50	ENSMUST00000225778.2	ENSMUSG00000069206.15	Zfp874a	chr13	protein_coding	zinc finger protein 874a
chr13	67579664	67596940	-	67591453	67596940	3pMXE	0.33	50	50	ENSMUST00000224239.2	ENSMUSG00000069206.15	Zfp874a	chr13	protein_coding	zinc finger protein 874a
chr13	67591453	67595483	-	67591453	67596828	A5SS	0.33	50	50	ENSMUST00000180580.9	ENSMUSG00000069206.15	Zfp874a	chr13	protein_coding	zinc finger protein 874a
chr13	67622673	67632260	-	67629964	67632260	A3SS&ES	0.25	50	50	ENSMUST00000019572.9	ENSMUSG00000059839.10	Zfp874b	chr13	protein_coding	zinc finger protein 874b
chr13	67629976	67632260	-	67629964	67632260	A3SS	0.25	50	50	ENSMUST00000019572.9	ENSMUSG00000059839.10	Zfp874b	chr13	protein_coding	zinc finger protein 874b
chr13	67623070	67632340	-	67623070	67629289	A5SS&ES	0.33	50	50	ENSMUST00000019572.9	ENSMUSG00000059839.10	Zfp874b	chr13	protein_coding	zinc finger protein 874b
chr13	67623070	67632260	-	67623070	67632340	A5SS	0.33	50	50	ENSMUST00000223711.2	ENSMUSG00000059839.10	Zfp874b	chr13	protein_coding	zinc finger protein 874b
chr13	67623070	67632260	-	67622673	67632260	A3SS	0.25	50	50	ENSMUST00000225027.2	ENSMUSG00000059839.10	Zfp874b	chr13	protein_coding	zinc finger protein 874b
chr13	67629976	67632260	-	67622673	67632260	A3SS	0.25	50	50	ENSMUST00000225027.2	ENSMUSG00000059839.10	Zfp874b	chr13	protein_coding	zinc finger protein 874b
chr13	67629964	67632260	-	67623070	67632260	A3SS	0.25	50	50	ENSMUST00000224308.2	ENSMUSG00000059839.10	Zfp874b	chr13	protein_coding	zinc finger protein 874b
chr13	67629976	67632260	-	67623070	67632260	A3SS	0.25	50	50	ENSMUST00000224308.2	ENSMUSG00000059839.10	Zfp874b	chr13	protein_coding	zinc finger protein 874b
chr13	67623070	67629289	-	67623070	67632260	A5SS	0.33	50	50	ENSMUST00000224308.2	ENSMUSG00000059839.10	Zfp874b	chr13	protein_coding	zinc finger protein 874b
chr13	67642848	67668745	-	67642848	67648530	5pMXE	0.2	50	50	ENSMUST00000171518.8	ENSMUSG00000071291.11	Zfp58	chr13	protein_coding	zinc finger protein 58
chr13	67642848;67648036	67648021;67648530	-	67642848	67648530	cassetteExon	0.5	100	100	ENSMUST00000171518.8	ENSMUSG00000071291.11	Zfp58	chr13	protein_coding	zinc finger protein 58
chr13	67642848	67644304	-	67642848	67648530	A5SS	0.2	50	50	ENSMUST00000171518.8	ENSMUSG00000071291.11	Zfp58	chr13	protein_coding	zinc finger protein 58
chr13	67642848	67648490	-	67642848	67648530	A5SS	0.2	50	50	ENSMUST00000171518.8	ENSMUSG00000071291.11	Zfp58	chr13	protein_coding	zinc finger protein 58
chr13	67642848	67668745	-	67642848	67648490	5pMXE	0.2	50	50	ENSMUST00000076123.12	ENSMUSG00000071291.11	Zfp58	chr13	protein_coding	zinc finger protein 58
chr13	67642848;67644330	67644304;67648490	-	67642848	67648490	cassetteExon	0.5	100	100	ENSMUST00000076123.12	ENSMUSG00000071291.11	Zfp58	chr13	protein_coding	zinc finger protein 58
chr13	67642848	67648021	-	67642848	67648490	A5SS	0.2	50	50	ENSMUST00000076123.12	ENSMUSG00000071291.11	Zfp58	chr13	protein_coding	zinc finger protein 58
chr13	67642848	67644304	-	67642848	67648021	A5SS	0.25	50	50	ENSMUST00000091523.9	ENSMUSG00000071291.11	Zfp58	chr13	protein_coding	zinc finger protein 58
chr13	67666231	67668745	-	67642848	67668745	A3SS	0.33	50	50	ENSMUST00000167914.2	ENSMUSG00000097565.2	Gm26965	chr13	protein_coding	predicted gene, 26965
chr13	67667339	67668745	-	67642848	67668745	A3SS	0.33	50	50	ENSMUST00000167914.2	ENSMUSG00000097565.2	Gm26965	chr13	protein_coding	predicted gene, 26965
chr13	67642848	67644304	-	67642848	67668745	A5SS	0.2	50	50	ENSMUST00000167914.2	ENSMUSG00000097565.2	Gm26965	chr13	protein_coding	predicted gene, 26965
chr13	67642848	67648021	-	67642848	67668745	A5SS	0.2	50	50	ENSMUST00000167914.2	ENSMUSG00000097565.2	Gm26965	chr13	protein_coding	predicted gene, 26965
chr13	67668840	67669267	-	67668840	67669312	A5SS	0.5	50	50	ENSMUST00000167914.2	ENSMUSG00000097565.2	Gm26965	chr13	protein_coding	predicted gene, 26965
chr13	67666231;67667339	67667285;67668745	-	67666231	67668745	cassetteExon	0.5	100	100	ENSMUST00000181767.8	ENSMUSG00000097333.8	Zfp87	chr13	protein_coding	zinc finger protein 87
chr13	67701372	67701693	+	67701472	67701693	A5SS	0.5	50	50	ENSMUST00000223845.2	ENSMUSG00000097360.9	9430065F17Rik	chr13	lncRNA	RIKEN cDNA 9430065F17 gene
chr13	67707406	67711847	+	67707406	67708547	3pMXE	0.5	50	50	ENSMUST00000224664.2	ENSMUSG00000097360.9	9430065F17Rik	chr13	lncRNA	RIKEN cDNA 9430065F17 gene
chr13	67744894	67785766	-	67744894	67757692	5pMXE	0.33	50	50	ENSMUST00000012873.16	ENSMUSG00000058093.14	Zfp729b	chr13	protein_coding	zinc finger protein 729b
chr13	67744894	67757662	-	67744894	67757692	A5SS	0.33	50	50	ENSMUST00000012873.16	ENSMUSG00000058093.14	Zfp729b	chr13	protein_coding	zinc finger protein 729b
chr13	67744894	67757692	-	67742034	67757692	A3SS	0.5	50	50	ENSMUST00000223599.2	ENSMUSG00000058093.14	Zfp729b	chr13	protein_coding	zinc finger protein 729b
chr13	67742034	67743335	-	67742034	67757692	A5SS	0.5	50	50	ENSMUST00000223599.2	ENSMUSG00000058093.14	Zfp729b	chr13	protein_coding	zinc finger protein 729b
chr13	67744894	67785766	-	67744894	67757662	5pMXE	0.33	50	50	ENSMUST00000138725.3	ENSMUSG00000058093.14	Zfp729b	chr13	protein_coding	zinc finger protein 729b
chr13	67772280	67785766	-	67744894	67785766	A3SS	0.5	50	50	ENSMUST00000224814.2	ENSMUSG00000114923.2	Gm49345	chr13	protein_coding	predicted gene, 49345
chr13	67772280	67775093	-	67772280	67785766	A5SS	0.5	50	50	ENSMUST00000012314.10	ENSMUSG00000021510.12	Zfp729a	chr13	protein_coding	zinc finger protein 729a
chr13	67765615	67766339	-	67764667	67766339	A3SS	0.5	50	50	ENSMUST00000224548.2	ENSMUSG00000021510.12	Zfp729a	chr13	protein_coding	zinc finger protein 729a
chr13	67821807	67834537	-	67821807	67831522	5pMXE	0.33	50	50	ENSMUST00000137496.10	ENSMUSG00000048280.19	Zfp738	chr13	protein_coding	zinc finger protein 738
chr13	67821807	67831552	-	67821807	67831522	A5SS	0.33	50	50	ENSMUST00000137496.10	ENSMUSG00000048280.19	Zfp738	chr13	protein_coding	zinc finger protein 738
chr13	67821807	67834537	-	67821807	67831552	5pMXE	0.33	50	50	ENSMUST00000175821.8	ENSMUSG00000048280.19	Zfp738	chr13	protein_coding	zinc finger protein 738
chr13	67859126	67869566	-	67859126	67877180	A5SS	0.25	50	50	ENSMUST00000073157.15	ENSMUSG00000071281.13	Zfp65	chr13	protein_coding	zinc finger protein 65
chr13	67859126	67872307	-	67859126	67877180	A5SS	0.25	50	50	ENSMUST00000073157.15	ENSMUSG00000071281.13	Zfp65	chr13	protein_coding	zinc finger protein 65
chr13	67859126	67872337	-	67859126	67877180	A5SS	0.25	50	50	ENSMUST00000073157.15	ENSMUSG00000071281.13	Zfp65	chr13	protein_coding	zinc finger protein 65
chr13	67859126;67869664	67869566;67872307	-	67859126	67872307	cassetteExon	0.5	100	100	ENSMUST00000130891.3	ENSMUSG00000071281.13	Zfp65	chr13	protein_coding	zinc finger protein 65
chr13	67859126	67872337	-	67859126	67872307	A5SS	0.25	50	50	ENSMUST00000130891.3	ENSMUSG00000071281.13	Zfp65	chr13	protein_coding	zinc finger protein 65
chr13	67859126	67869566	-	67859126	67872337	A5SS	0.25	50	50	ENSMUST00000223829.2	ENSMUSG00000071281.13	Zfp65	chr13	protein_coding	zinc finger protein 65
chr13	67900633	67903135	-	67900633	67903182	A5SS	0.5	50	50	ENSMUST00000144183.3	ENSMUSG00000058331.16	Zfp85	chr13	protein_coding	zinc finger protein 85
chr13	67932035;67932608	67932513;67934278	+	67932035	67934278	cassetteExon	0.5	100	100	ENSMUST00000220570.2	ENSMUSG00000090659.10	Zfp493	chr13	protein_coding	zinc finger protein 493
chr13	67927976	67931909	+	67927938	67931909	A5SS	0.5	50	50	ENSMUST00000220570.2	ENSMUSG00000090659.10	Zfp493	chr13	protein_coding	zinc finger protein 493
chr13	67932608	67940191	+	67932608	67934278	3pMXE	0.5	50	50	ENSMUST00000164936.10	ENSMUSG00000090659.10	Zfp493	chr13	protein_coding	zinc finger protein 493
chr13	67932035	67934278	+	67932035	67932513	A3SS&ES	0.5	50	50	ENSMUST00000181319.2	ENSMUSG00000090659.10	Zfp493	chr13	protein_coding	zinc finger protein 493
chr13	67962015	67970403	+	67962015	67970360	A3SS	0.5	50	50	ENSMUST00000181391.8	ENSMUSG00000030446.18	Zfp273	chr13	protein_coding	zinc finger protein 273
chr13	67981990	67991669	+	67981990	67991115	3pMXE	0.5	50	50	ENSMUST00000221266.2	ENSMUSG00000058246.9	Gm10037	chr13	protein_coding	predicted gene 10037
chr13	67980985	67981351	+	67979272	67981351	A5SS	0.5	50	50	ENSMUST00000221266.2	ENSMUSG00000058246.9	Gm10037	chr13	protein_coding	predicted gene 10037
chr13	67982009	67991669	+	67981990	67991669	A5SS	0.5	50	50	ENSMUST00000222626.2	ENSMUSG00000058246.9	Gm10037	chr13	protein_coding	predicted gene 10037
chr13	68720819	68725707	-	68720819;68723509	68723137;68725707	ES	0.5	50	50	ENSMUST00000045827.5	ENSMUSG00000034617.8	Mtrr	chr13	protein_coding	5-methyltetrahydrofolate-homocysteine methyltransferase reductase
chr13	68725824	68728670	-	68725824;68727815	68727662;68728670	ES	0.5	50	50	ENSMUST00000045827.5	ENSMUSG00000034617.8	Mtrr	chr13	protein_coding	5-methyltetrahydrofolate-homocysteine methyltransferase reductase
chr13	68728834	68729415	-	68728834	68730184	A5SS	0.25	50	50	ENSMUST00000045827.5	ENSMUSG00000034617.8	Mtrr	chr13	protein_coding	5-methyltetrahydrofolate-homocysteine methyltransferase reductase
chr13	68728834	68729740	-	68728834	68730184	A5SS	0.25	50	50	ENSMUST00000045827.5	ENSMUSG00000034617.8	Mtrr	chr13	protein_coding	5-methyltetrahydrofolate-homocysteine methyltransferase reductase
chr13	68728834	68729922	-	68728834	68730184	A5SS	0.25	50	50	ENSMUST00000045827.5	ENSMUSG00000034617.8	Mtrr	chr13	protein_coding	5-methyltetrahydrofolate-homocysteine methyltransferase reductase
chr13	68728834	68729740	-	68728834	68729415	A5SS	0.25	50	50	ENSMUST00000223398.2	ENSMUSG00000034617.8	Mtrr	chr13	protein_coding	5-methyltetrahydrofolate-homocysteine methyltransferase reductase
chr13	68728834	68729922	-	68728834	68729415	A5SS	0.25	50	50	ENSMUST00000223398.2	ENSMUSG00000034617.8	Mtrr	chr13	protein_coding	5-methyltetrahydrofolate-homocysteine methyltransferase reductase
chr13	68720819	68725707	-	68723509	68725707	3pMXE	0.5	50	50	ENSMUST00000222107.2	ENSMUSG00000034617.8	Mtrr	chr13	protein_coding	5-methyltetrahydrofolate-homocysteine methyltransferase reductase
chr13	68725824	68728670	-	68727815	68728670	3pMXE	0.5	50	50	ENSMUST00000223055.2	ENSMUSG00000034617.8	Mtrr	chr13	protein_coding	5-methyltetrahydrofolate-homocysteine methyltransferase reductase
chr13	68728834	68729922	-	68728834	68729740	A5SS	0.25	50	50	ENSMUST00000223055.2	ENSMUSG00000034617.8	Mtrr	chr13	protein_coding	5-methyltetrahydrofolate-homocysteine methyltransferase reductase
chr13	68730469	68731658	+	68730383	68731658	A5SS	0.25	50	50	ENSMUST00000222660.2	ENSMUSG00000021532.12	Fastkd3	chr13	protein_coding	FAST kinase domains 3
chr13	68730717	68731658	+	68730383	68731658	A5SS	0.25	50	50	ENSMUST00000222660.2	ENSMUSG00000021532.12	Fastkd3	chr13	protein_coding	FAST kinase domains 3
chr13	68730737	68731658	+	68730383	68731658	A5SS	0.25	50	50	ENSMUST00000222660.2	ENSMUSG00000021532.12	Fastkd3	chr13	protein_coding	FAST kinase domains 3
chr13	68730469	68731658	+	68730469	68732255	A3SS	0.5	50	50	ENSMUST00000222068.2	ENSMUSG00000021532.12	Fastkd3	chr13	protein_coding	FAST kinase domains 3
chr13	68733382	68735840	+	68733382	68735779	A3SS	0.5	50	50	ENSMUST00000222068.2	ENSMUSG00000021532.12	Fastkd3	chr13	protein_coding	FAST kinase domains 3
chr13	68735953	68737342	+	68735953	68737439	A3SS	0.5	50	50	ENSMUST00000222068.2	ENSMUSG00000021532.12	Fastkd3	chr13	protein_coding	FAST kinase domains 3
chr13	68738339	68740036	+	68738339	68740050	A3SS	0.5	50	50	ENSMUST00000222068.2	ENSMUSG00000021532.12	Fastkd3	chr13	protein_coding	FAST kinase domains 3
chr13	68733121	68733297	+	68732475	68733297	A5SS	0.5	50	50	ENSMUST00000222068.2	ENSMUSG00000021532.12	Fastkd3	chr13	protein_coding	FAST kinase domains 3
chr13	68730717	68731658	+	68730469	68731658	A5SS	0.25	50	50	ENSMUST00000051784.10	ENSMUSG00000021532.12	Fastkd3	chr13	protein_coding	FAST kinase domains 3
chr13	68730737	68731658	+	68730469	68731658	A5SS	0.25	50	50	ENSMUST00000051784.10	ENSMUSG00000021532.12	Fastkd3	chr13	protein_coding	FAST kinase domains 3
chr13	68730717	68731658	+	68730737	68731658	A5SS	0.25	50	50	ENSMUST00000222631.2	ENSMUSG00000021532.12	Fastkd3	chr13	protein_coding	FAST kinase domains 3
chr13	69151031;69170017	69169943;69179508	+	69151031	69179508	cassetteExon	0.5	100	100	ENSMUST00000221765.2	ENSMUSG00000113121.2	Gm35161	chr13	lncRNA	predicted gene, 35161
chr13	69664022	69680455	-	69664022	69681607	A5SS	0.5	50	50	ENSMUST00000198607.5	ENSMUSG00000034575.14	Tent4a	chr13	protein_coding	terminal nucleotidyltransferase 4A
chr13	69760577	69763531	+	69760577;69761161	69761057;69763531	ES	0.5	50	50	ENSMUST00000143716.8	ENSMUSG00000021595.19	Nsun2	chr13	protein_coding	NOL1/NOP2/Sun domain family member 2
chr13	69682029	69705908	+	69682029	69760420	A3SS	0.5	50	50	ENSMUST00000143716.8	ENSMUSG00000021595.19	Nsun2	chr13	protein_coding	NOL1/NOP2/Sun domain family member 2
chr13	69760307	69760420	+	69682029	69760420	A5SS	0.5	50	50	ENSMUST00000143716.8	ENSMUSG00000021595.19	Nsun2	chr13	protein_coding	NOL1/NOP2/Sun domain family member 2
chr13	69760744	69761057	+	69760577	69761057	A5SS	0.5	50	50	ENSMUST00000143716.8	ENSMUSG00000021595.19	Nsun2	chr13	protein_coding	NOL1/NOP2/Sun domain family member 2
chr13	69742860	69743035	-	69734854	69743035	A3SS	0.5	50	50	ENSMUST00000091514.6	ENSMUSG00000021594.12	Srd5a1	chr13	protein_coding	steroid 5 alpha-reductase 1
chr13	69734854	69742921	-	69734854	69743035	A5SS	0.5	50	50	ENSMUST00000091514.6	ENSMUSG00000021594.12	Srd5a1	chr13	protein_coding	steroid 5 alpha-reductase 1
chr13	69950712	69957919	+	69950690	69957919	A5SS	0.5	50	50	ENSMUST00000223376.2	ENSMUSG00000021598.10	Med10	chr13	protein_coding	mediator complex subunit 10
chr13	70161417	70168889	-	70152710	70168889	A3SS	0.33	50	50	ENSMUST00000186662.7	ENSMUSG00000099639.7	1700084F23Rik	chr13	lncRNA	RIKEN cDNA 1700084F23 gene
chr13	70167197	70168889	-	70152710	70168889	A3SS	0.33	50	50	ENSMUST00000186662.7	ENSMUSG00000099639.7	1700084F23Rik	chr13	lncRNA	RIKEN cDNA 1700084F23 gene
chr13	70170459	70176255	-	70174966	70176255	A3SS&ES	0.5	50	50	ENSMUST00000186662.7	ENSMUSG00000099639.7	1700084F23Rik	chr13	lncRNA	RIKEN cDNA 1700084F23 gene
chr13	70174966	70175469	-	70174966	70176255	A5SS	0.33	50	50	ENSMUST00000186662.7	ENSMUSG00000099639.7	1700084F23Rik	chr13	lncRNA	RIKEN cDNA 1700084F23 gene
chr13	70174966	70176073	-	70174966	70176255	A5SS	0.33	50	50	ENSMUST00000186662.7	ENSMUSG00000099639.7	1700084F23Rik	chr13	lncRNA	RIKEN cDNA 1700084F23 gene
chr13	70174966	70176073	-	70174966	70175469	5pMXE	0.33	50	50	ENSMUST00000189890.7	ENSMUSG00000099639.7	1700084F23Rik	chr13	lncRNA	RIKEN cDNA 1700084F23 gene
chr13	70167197	70168889	-	70161417	70168889	A3SS	0.5	50	50	ENSMUST00000188461.7	ENSMUSG00000099639.7	1700084F23Rik	chr13	lncRNA	RIKEN cDNA 1700084F23 gene
chr13	70714838	70721241	-	70714838	70721237	A5SS	0.5	50	50	ENSMUST00000222738.2	ENSMUSG00000034525.8	Ice1	chr13	protein_coding	interactor of little elongation complex ELL subunit 1
chr13	70735915	70740692	-	70700193	70740692	A3SS	0.33	50	50	ENSMUST00000223102.2	ENSMUSG00000034525.8	Ice1	chr13	protein_coding	interactor of little elongation complex ELL subunit 1
chr13	70737931	70740692	-	70700193	70740692	A3SS	0.33	50	50	ENSMUST00000223102.2	ENSMUSG00000034525.8	Ice1	chr13	protein_coding	interactor of little elongation complex ELL subunit 1
chr13	70700193	70714687	-	70700193	70740692	A5SS	0.5	50	50	ENSMUST00000223102.2	ENSMUSG00000034525.8	Ice1	chr13	protein_coding	interactor of little elongation complex ELL subunit 1
chr13	70737931	70740692	-	70735915	70740692	A3SS	0.5	50	50	ENSMUST00000222274.2	ENSMUSG00000034525.8	Ice1	chr13	protein_coding	interactor of little elongation complex ELL subunit 1
chr13	70749355	70750298	-	70749318	70750298	A3SS	0.5	50	50	ENSMUST00000220637.2	ENSMUSG00000034525.8	Ice1	chr13	protein_coding	interactor of little elongation complex ELL subunit 1
chr13	70754995;70756671	70756429;70756895	-	70754995	70756895	cassetteExon	0.5	100	100	ENSMUST00000043493.7	ENSMUSG00000034525.8	Ice1	chr13	protein_coding	interactor of little elongation complex ELL subunit 1
chr13	70768888	70771206	-	70768888	70769557	A5SS&ES	0.5	50	50	ENSMUST00000043493.7	ENSMUSG00000034525.8	Ice1	chr13	protein_coding	interactor of little elongation complex ELL subunit 1
chr13	70721491;70722749	70722632;70722909	+	70721491	70722909	cassetteExon	0.5	100	100	ENSMUST00000187681.7	ENSMUSG00000101051.7	1700100L14Rik	chr13	lncRNA	RIKEN cDNA 1700100L14 gene
chr13	70909895	70911534	-	70901419	70911534	A3SS	0.5	50	50	ENSMUST00000080145.13	ENSMUSG00000049538.15	Adamts16	chr13	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16
chr13	70918397	70920102	-	70918402	70920102	A3SS	0.5	50	50	ENSMUST00000080145.13	ENSMUSG00000049538.15	Adamts16	chr13	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16
chr13	70916842	70918098	-	70916842	70918272	A5SS	0.5	50	50	ENSMUST00000080145.13	ENSMUSG00000049538.15	Adamts16	chr13	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16
chr13	72108404	72108816	-	72108404	72111332	A5SS	0.5	50	50	ENSMUST00000077337.9	ENSMUSG00000060969.10	Irx1	chr13	protein_coding	Iroquois homeobox 1
chr13	72777432	72778673	+	72777432	72778690	A3SS	0.5	50	50	ENSMUST00000074372.6	ENSMUSG00000001504.11	Irx2	chr13	protein_coding	Iroquois homeobox 2
chr13	72778082	72778690	+	72777432	72778690	A5SS	0.5	50	50	ENSMUST00000074372.6	ENSMUSG00000001504.11	Irx2	chr13	protein_coding	Iroquois homeobox 2
chr13	72780767	72781383	+	72780780	72781383	A5SS	0.5	50	50	ENSMUST00000074372.6	ENSMUSG00000001504.11	Irx2	chr13	protein_coding	Iroquois homeobox 2
chr13	73408995	73412967	+	73408772	73412967	A5SS	0.5	50	50	ENSMUST00000176684.8	ENSMUSG00000021604.16	Irx4	chr13	protein_coding	Iroquois homeobox 4
chr13	73475588	73476397	-	73475588	73476458	A5SS	0.5	50	50	ENSMUST00000223293.2	ENSMUSG00000021606.9	Ndufs6	chr13	protein_coding	NADH:ubiquinone oxidoreductase core subunit S6
chr13	73468179	73468413	-	73468203	73468413	A3SS	0.5	50	50	ENSMUST00000222930.2	ENSMUSG00000021606.9	Ndufs6	chr13	protein_coding	NADH:ubiquinone oxidoreductase core subunit S6
chr13	73479212	73479479	+	73479210	73479479	A5SS	0.5	50	50	ENSMUST00000221730.2	ENSMUSG00000021607.10	Mrpl36	chr13	protein_coding	mitochondrial ribosomal protein L36
chr13	73615636	73637006	+	73615636;73632522	73632380;73637006	ES	0.5	50	50	ENSMUST00000022099.15	ENSMUSG00000021608.16	Lpcat1	chr13	protein_coding	lysophosphatidylcholine acyltransferase 1
chr13	73619953	73632380	+	73615636	73632380	A5SS	0.5	50	50	ENSMUST00000022099.15	ENSMUSG00000021608.16	Lpcat1	chr13	protein_coding	lysophosphatidylcholine acyltransferase 1
chr13	73615636	73642921	+	73615636;73637220	73637006;73642921	ES	0.5	50	50	ENSMUST00000123766.8	ENSMUSG00000021608.16	Lpcat1	chr13	protein_coding	lysophosphatidylcholine acyltransferase 1
chr13	73615636	73632380	+	73615636	73642921	A3SS	0.33	50	50	ENSMUST00000147566.8	ENSMUSG00000021608.16	Lpcat1	chr13	protein_coding	lysophosphatidylcholine acyltransferase 1
chr13	73784655	73785222	+	73784655	73785325	A3SS	0.5	50	50	ENSMUST00000022104.9	ENSMUSG00000021611.10	Tert	chr13	protein_coding	telomerase reverse transcriptase
chr13	73776600	73782271	+	73776793	73782271	A5SS	0.5	50	50	ENSMUST00000022104.9	ENSMUSG00000021611.10	Tert	chr13	protein_coding	telomerase reverse transcriptase
chr13	73822736	73823841	-	73822736;73823625	73823488;73823841	ES	0.5	50	50	ENSMUST00000109679.4	ENSMUSG00000021612.16	Slc6a18	chr13	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 18
chr13	73812432;73813818	73813656;73814430	-	73812432	73814430	cassetteExon	0.5	100	100	ENSMUST00000109679.4	ENSMUSG00000021612.16	Slc6a18	chr13	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 18
chr13	73814589;73814902	73814812;73816250	-	73814589;73815178	73814974;73816250	MXE	0.5	100	100	ENSMUST00000109679.4	ENSMUSG00000021612.16	Slc6a18	chr13	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 18
chr13	73814559	73814974	-	73814589	73814974	A3SS	0.5	50	50	ENSMUST00000109679.4	ENSMUSG00000021612.16	Slc6a18	chr13	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 18
chr13	73815117	73816250	-	73815178	73816250	A3SS	0.33	50	50	ENSMUST00000109679.4	ENSMUSG00000021612.16	Slc6a18	chr13	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 18
chr13	73822751	73823488	-	73822736	73823488	A3SS	0.5	50	50	ENSMUST00000109679.4	ENSMUSG00000021612.16	Slc6a18	chr13	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 18
chr13	73814589;73815117	73814974;73816250	-	73814589;73814902	73814812;73816250	MXE	0.5	100	100	ENSMUST00000109680.10	ENSMUSG00000021612.16	Slc6a18	chr13	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 18
chr13	73814902;73815117	73814998;73816250	-	73814902	73816250	cassetteExon	0.5	100	100	ENSMUST00000109680.10	ENSMUSG00000021612.16	Slc6a18	chr13	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 18
chr13	73814902;73815178	73814998;73816250	-	73814902	73816250	cassetteExon	0.5	100	100	ENSMUST00000109680.10	ENSMUSG00000021612.16	Slc6a18	chr13	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 18
chr13	73814902	73816250	-	73815178	73816250	A3SS&ES	0.33	50	50	ENSMUST00000022105.15	ENSMUSG00000021612.16	Slc6a18	chr13	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 18
chr13	73814902	73816250	-	73814902	73814998	5pMXE	0.5	50	50	ENSMUST00000220703.2	ENSMUSG00000021612.16	Slc6a18	chr13	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 18
chr13	73814589	73814974	-	73814589	73814812	A5SS&ES	0.5	50	50	ENSMUST00000220703.2	ENSMUSG00000021612.16	Slc6a18	chr13	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 18
chr13	73822736	73823841	-	73823625	73823841	A3SS&ES	0.5	50	50	ENSMUST00000221987.2	ENSMUSG00000021612.16	Slc6a18	chr13	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 18
chr13	73841206	73852789	-	73841206	73848551	5pMXE	0.5	50	50	ENSMUST00000022048.6	ENSMUSG00000021565.17	Slc6a19	chr13	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 19
chr13	73841124	73848551	-	73841206	73848551	A3SS	0.5	50	50	ENSMUST00000022048.6	ENSMUSG00000021565.17	Slc6a19	chr13	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 19
chr13	73839937	73840116	-	73839937	73841066	A5SS	0.25	50	50	ENSMUST00000022048.6	ENSMUSG00000021565.17	Slc6a19	chr13	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 19
chr13	73839937	73840274	-	73839937	73841066	A5SS	0.25	50	50	ENSMUST00000022048.6	ENSMUSG00000021565.17	Slc6a19	chr13	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 19
chr13	73839937	73840608	-	73839937	73841066	A5SS	0.25	50	50	ENSMUST00000022048.6	ENSMUSG00000021565.17	Slc6a19	chr13	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 19
chr13	73839937	73840116	-	73839937	73840608	A5SS	0.25	50	50	ENSMUST00000120322.8	ENSMUSG00000021565.17	Slc6a19	chr13	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 19
chr13	73839937	73840274	-	73839937	73840608	A5SS	0.25	50	50	ENSMUST00000120322.8	ENSMUSG00000021565.17	Slc6a19	chr13	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 19
chr13	73839937	73840274	-	73839937	73840116	A5SS	0.25	50	50	ENSMUST00000139087.8	ENSMUSG00000021565.17	Slc6a19	chr13	protein_coding	solute carrier family 6 (neurotransmitter transporter), member 19
chr13	73851961	73856739	+	73848242	73856739	A5SS	0.5	50	50	ENSMUST00000022049.5	ENSMUSG00000021566.8	Slc6a19os	chr13	lncRNA	solute carrier family 6 (neurotransmitter transporter), member 19, opposite strand
chr13	73943384	73943723	+	73943384	73943604	A3SS	0.5	50	50	ENSMUST00000222742.2	ENSMUSG00000017756.10	Slc12a7	chr13	protein_coding	solute carrier family 12, member 7
chr13	73912009	73932638	+	73881456	73932638	A5SS	0.33	50	50	ENSMUST00000222742.2	ENSMUSG00000017756.10	Slc12a7	chr13	protein_coding	solute carrier family 12, member 7
chr13	73912661	73932638	+	73881456	73932638	A5SS	0.33	50	50	ENSMUST00000222742.2	ENSMUSG00000017756.10	Slc12a7	chr13	protein_coding	solute carrier family 12, member 7
chr13	73949215	73950360	+	73949215	73953533	A3SS	0.5	50	50	ENSMUST00000017900.9	ENSMUSG00000017756.10	Slc12a7	chr13	protein_coding	solute carrier family 12, member 7
chr13	73958203	73960322	+	73958203	73961658	A3SS	0.5	50	50	ENSMUST00000017900.9	ENSMUSG00000017756.10	Slc12a7	chr13	protein_coding	solute carrier family 12, member 7
chr13	73912661	73932638	+	73912009	73932638	A5SS	0.33	50	50	ENSMUST00000017900.9	ENSMUSG00000017756.10	Slc12a7	chr13	protein_coding	solute carrier family 12, member 7
chr13	73995135	73995522	-	73995135;73995424	73995389;73995522	ES	0.5	50	50	ENSMUST00000022051.14	ENSMUSG00000021567.16	Nkd2	chr13	protein_coding	naked cuticle 2
chr13	73995424	73995570	-	73995424	73995522	A5SS	0.5	50	50	ENSMUST00000022051.14	ENSMUSG00000021567.16	Nkd2	chr13	protein_coding	naked cuticle 2
chr13	73995135	73995522	-	73995135	73995389	A5SS&ES	0.5	50	50	ENSMUST00000222004.2	ENSMUSG00000021567.16	Nkd2	chr13	protein_coding	naked cuticle 2
chr13	74078334;74080209	74080151;74080977	-	74078334	74080977	cassetteExon	0.5	100	100	ENSMUST00000022053.11	ENSMUSG00000021569.11	Trip13	chr13	protein_coding	thyroid hormone receptor interactor 13
chr13	74068567	74069292	-	74068553	74069292	A3SS	0.5	50	50	ENSMUST00000022053.11	ENSMUSG00000021569.11	Trip13	chr13	protein_coding	thyroid hormone receptor interactor 13
chr13	74088909;74089275	74089027;74090063	+	74088909	74090063	cassetteExon	0.5	100	100	ENSMUST00000222399.2	ENSMUSG00000057649.7	Brd9	chr13	protein_coding	bromodomain containing 9
chr13	74090173	74090750	+	74090173	74090813	A3SS	0.33	50	50	ENSMUST00000222399.2	ENSMUSG00000057649.7	Brd9	chr13	protein_coding	bromodomain containing 9
chr13	74090173	74090810	+	74090173	74090813	A3SS	0.33	50	50	ENSMUST00000222399.2	ENSMUSG00000057649.7	Brd9	chr13	protein_coding	bromodomain containing 9
chr13	74094278	74095798	+	74094278	74095796	A3SS	0.5	50	50	ENSMUST00000222399.2	ENSMUSG00000057649.7	Brd9	chr13	protein_coding	bromodomain containing 9
chr13	74086354	74086553	+	74086064	74086553	A5SS	0.5	50	50	ENSMUST00000222399.2	ENSMUSG00000057649.7	Brd9	chr13	protein_coding	bromodomain containing 9
chr13	74090173	74090750	+	74090173	74090810	A3SS	0.33	50	50	ENSMUST00000099384.4	ENSMUSG00000057649.7	Brd9	chr13	protein_coding	bromodomain containing 9
chr13	74121892	74122676	+	74121900	74122676	A5SS	0.5	50	50	ENSMUST00000222487.2	ENSMUSG00000069189.6	Zdhhc11	chr13	protein_coding	zinc finger, DHHC domain containing 11
chr13	74130828	74133408	+	74130883	74133408	A5SS	0.5	50	50	ENSMUST00000222487.2	ENSMUSG00000069189.6	Zdhhc11	chr13	protein_coding	zinc finger, DHHC domain containing 11
chr13	74157628;74169569	74169258;74178869	+	74157628	74178869	cassetteExon	0.5	100	100	ENSMUST00000140217.8	ENSMUSG00000021573.16	Tppp	chr13	protein_coding	tubulin polymerization promoting protein
chr13	74206613	74210303	-	74206613;74207688	74207561;74210303	ES	0.5	50	50	ENSMUST00000222609.2	ENSMUSG00000021572.10	Cep72	chr13	protein_coding	centrosomal protein 72
chr13	74186447;74188281	74188170;74191625	-	74186447	74191625	cassetteExon	0.5	100	100	ENSMUST00000222609.2	ENSMUSG00000021572.10	Cep72	chr13	protein_coding	centrosomal protein 72
chr13	74199705	74201000	-	74199740	74201000	A3SS	0.5	50	50	ENSMUST00000222609.2	ENSMUSG00000021572.10	Cep72	chr13	protein_coding	centrosomal protein 72
chr13	74203132	74206421	-	74203110	74206421	A3SS	0.5	50	50	ENSMUST00000222609.2	ENSMUSG00000021572.10	Cep72	chr13	protein_coding	centrosomal protein 72
chr13	74197153	74198179	-	74197153	74198419	A5SS	0.5	50	50	ENSMUST00000222609.2	ENSMUSG00000021572.10	Cep72	chr13	protein_coding	centrosomal protein 72
chr13	74203110	74204123	-	74203110	74206421	A5SS	0.5	50	50	ENSMUST00000222609.2	ENSMUSG00000021572.10	Cep72	chr13	protein_coding	centrosomal protein 72
chr13	74186447	74191625	-	74188281	74191625	A3SS	0.5	50	50	ENSMUST00000223028.2	ENSMUSG00000021572.10	Cep72	chr13	protein_coding	centrosomal protein 72
chr13	74269829	74298779	+	74269829	74278687	3pMXE	0.5	50	50	ENSMUST00000221410.2	ENSMUSG00000036123.9	Slc9a3	chr13	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 3
chr13	74313524	74314930	+	74313524	74313930	3pMXE	0.5	50	50	ENSMUST00000036208.7	ENSMUSG00000036123.9	Slc9a3	chr13	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 3
chr13	74313524;74314179	74313930;74314930	+	74313524	74314930	cassetteExon	0.5	100	100	ENSMUST00000225423.2	ENSMUSG00000036123.9	Slc9a3	chr13	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 3
chr13	74347794;74354184	74354162;74355026	-	74347794	74355026	cassetteExon	0.5	100	100	ENSMUST00000035934.7	ENSMUSG00000034152.7	Exoc3	chr13	protein_coding	exocyst complex component 3
chr13	74322267	74324500	-	74322267	74328554	A5SS	0.5	50	50	ENSMUST00000035934.7	ENSMUSG00000034152.7	Exoc3	chr13	protein_coding	exocyst complex component 3
chr13	74355216	74355942	-	74355216	74356777	A5SS	0.5	50	50	ENSMUST00000035934.7	ENSMUSG00000034152.7	Exoc3	chr13	protein_coding	exocyst complex component 3
chr13	74405688	74431156	-	74405688;74425928	74425747;74431156	ES	0.5	50	50	ENSMUST00000022059.14	ENSMUSG00000021575.17	Ahrr	chr13	protein_coding	aryl-hydrocarbon receptor repressor
chr13	74378096	74413467	-	74378096	74405591	A5SS&ES	0.5	50	50	ENSMUST00000022059.14	ENSMUSG00000021575.17	Ahrr	chr13	protein_coding	aryl-hydrocarbon receptor repressor
chr13	74405688	74408753	-	74405688	74425747	A5SS	0.2	50	50	ENSMUST00000022059.14	ENSMUSG00000021575.17	Ahrr	chr13	protein_coding	aryl-hydrocarbon receptor repressor
chr13	74405688	74409492	-	74405688	74425747	A5SS	0.2	50	50	ENSMUST00000022059.14	ENSMUSG00000021575.17	Ahrr	chr13	protein_coding	aryl-hydrocarbon receptor repressor
chr13	74405688	74413467	-	74405688	74425747	A5SS	0.2	50	50	ENSMUST00000022059.14	ENSMUSG00000021575.17	Ahrr	chr13	protein_coding	aryl-hydrocarbon receptor repressor
chr13	74405688	74408753	-	74405688	74431156	A5SS	0.2	50	50	ENSMUST00000109640.8	ENSMUSG00000021575.17	Ahrr	chr13	protein_coding	aryl-hydrocarbon receptor repressor
chr13	74405688	74409492	-	74405688	74431156	A5SS	0.2	50	50	ENSMUST00000109640.8	ENSMUSG00000021575.17	Ahrr	chr13	protein_coding	aryl-hydrocarbon receptor repressor
chr13	74405688	74413467	-	74405688	74431156	A5SS	0.2	50	50	ENSMUST00000109640.8	ENSMUSG00000021575.17	Ahrr	chr13	protein_coding	aryl-hydrocarbon receptor repressor
chr13	74378096;74405688	74405591;74413467	-	74378096	74413467	cassetteExon	0.5	100	100	ENSMUST00000222649.2	ENSMUSG00000021575.17	Ahrr	chr13	protein_coding	aryl-hydrocarbon receptor repressor
chr13	74405688	74409492	-	74405688	74408753	5pMXE	0.2	50	50	ENSMUST00000137538.8	ENSMUSG00000021575.17	Ahrr	chr13	protein_coding	aryl-hydrocarbon receptor repressor
chr13	74405688	74413467	-	74405688	74408753	5pMXE	0.2	50	50	ENSMUST00000137538.8	ENSMUSG00000021575.17	Ahrr	chr13	protein_coding	aryl-hydrocarbon receptor repressor
chr13	74405688	74413467	-	74405688	74409492	5pMXE	0.2	50	50	ENSMUST00000123058.2	ENSMUSG00000021575.17	Ahrr	chr13	protein_coding	aryl-hydrocarbon receptor repressor
chr13	74453769	74457809	-	74453769	74457803	A5SS	0.5	50	50	ENSMUST00000022060.7	ENSMUSG00000021576.7	Pdcd6	chr13	protein_coding	programmed cell death 6
chr13	74493056;74497148	74497062;74498265	-	74493056	74498265	cassetteExon	0.5	100	100	ENSMUST00000022062.8	ENSMUSG00000021577.15	Sdha	chr13	protein_coding	succinate dehydrogenase complex, subunit A, flavoprotein (Fp)
chr13	74485658	74487318	-	74485658	74487166	A5SS	0.5	50	50	ENSMUST00000022062.8	ENSMUSG00000021577.15	Sdha	chr13	protein_coding	succinate dehydrogenase complex, subunit A, flavoprotein (Fp)
chr13	74493056	74497917	-	74493056	74498265	A5SS	0.33	50	50	ENSMUST00000022062.8	ENSMUSG00000021577.15	Sdha	chr13	protein_coding	succinate dehydrogenase complex, subunit A, flavoprotein (Fp)
chr13	74471292	74487166	-	74471292	74471960	5pMXE	0.5	50	50	ENSMUST00000161434.2	ENSMUSG00000021577.15	Sdha	chr13	protein_coding	succinate dehydrogenase complex, subunit A, flavoprotein (Fp)
chr13	74485658	74487166	-	74471292	74487166	A3SS	0.5	50	50	ENSMUST00000221594.2	ENSMUSG00000021577.15	Sdha	chr13	protein_coding	succinate dehydrogenase complex, subunit A, flavoprotein (Fp)
chr13	74493056	74497062	-	74493056	74497917	A5SS	0.33	50	50	ENSMUST00000162137.2	ENSMUSG00000021577.15	Sdha	chr13	protein_coding	succinate dehydrogenase complex, subunit A, flavoprotein (Fp)
chr13	74498527	74504575	+	74498527;74501105	74500975;74504575	ES	0.5	50	50	ENSMUST00000022063.14	ENSMUSG00000021578.18	Ccdc127	chr13	protein_coding	coiled-coil domain containing 127
chr13	74498527	74500981	+	74498527	74500975	A3SS	0.33	50	50	ENSMUST00000022063.14	ENSMUSG00000021578.18	Ccdc127	chr13	protein_coding	coiled-coil domain containing 127
chr13	74501105	74508724	+	74501105	74504575	A3SS	0.5	50	50	ENSMUST00000022063.14	ENSMUSG00000021578.18	Ccdc127	chr13	protein_coding	coiled-coil domain containing 127
chr13	74501105	74508724	+	74501105;74504936	74504575;74508724	ES	0.33	50	50	ENSMUST00000160021.8	ENSMUSG00000021578.18	Ccdc127	chr13	protein_coding	coiled-coil domain containing 127
chr13	74504936;74507945	74507810;74508724	+	74504936	74508724	cassetteExon	0.5	100	100	ENSMUST00000160021.8	ENSMUSG00000021578.18	Ccdc127	chr13	protein_coding	coiled-coil domain containing 127
chr13	74498527;74504936	74504575;74508724	+	74498527;74501105	74500975;74508724	MXE	0.5	100	100	ENSMUST00000162672.8	ENSMUSG00000021578.18	Ccdc127	chr13	protein_coding	coiled-coil domain containing 127
chr13	74507945	74508724	+	74501105	74508724	A5SS	0.33	50	50	ENSMUST00000162672.8	ENSMUSG00000021578.18	Ccdc127	chr13	protein_coding	coiled-coil domain containing 127
chr13	74498527;74501105	74500981;74504575	+	74498527	74504575	cassetteExon	0.5	100	100	ENSMUST00000223491.2	ENSMUSG00000021578.18	Ccdc127	chr13	protein_coding	coiled-coil domain containing 127
chr13	74598135	74610701	-	74586105	74610701	A3SS	0.25	50	50	ENSMUST00000099446.5	ENSMUSG00000112964.2	E430024I08Rik	chr13	lncRNA	RIKEN cDNA E430024I08 gene
chr13	74598481	74610701	-	74586105	74610701	A3SS	0.25	50	50	ENSMUST00000099446.5	ENSMUSG00000112964.2	E430024I08Rik	chr13	lncRNA	RIKEN cDNA E430024I08 gene
chr13	74598530	74610701	-	74586105	74610701	A3SS	0.25	50	50	ENSMUST00000099446.5	ENSMUSG00000112964.2	E430024I08Rik	chr13	lncRNA	RIKEN cDNA E430024I08 gene
chr13	74586105	74591496	-	74586105	74610701	A5SS	0.5	50	50	ENSMUST00000099446.5	ENSMUSG00000112964.2	E430024I08Rik	chr13	lncRNA	RIKEN cDNA E430024I08 gene
chr13	74598135	74610701	-	74598135;74598481	74598355;74610701	ES	0.33	50	50	ENSMUST00000222455.2	ENSMUSG00000112964.2	E430024I08Rik	chr13	lncRNA	RIKEN cDNA E430024I08 gene
chr13	74598530	74610701	-	74598481	74610701	A3SS	0.33	50	50	ENSMUST00000222455.2	ENSMUSG00000112964.2	E430024I08Rik	chr13	lncRNA	RIKEN cDNA E430024I08 gene
chr13	74598135;74598530	74598355;74610701	-	74598135	74610701	cassetteExon	0.5	100	100	ENSMUST00000221334.2	ENSMUSG00000112964.2	E430024I08Rik	chr13	lncRNA	RIKEN cDNA E430024I08 gene
chr13	74610785	74611286	-	74610785	74611328	A5SS	0.5	50	50	ENSMUST00000220632.2	ENSMUSG00000112964.2	E430024I08Rik	chr13	lncRNA	RIKEN cDNA E430024I08 gene
chr13	74631062;74632141	74632018;74641969	-	74631062	74641969	cassetteExon	0.5	100	100	ENSMUST00000202645.4	ENSMUSG00000069208.10	Zfp825	chr13	protein_coding	zinc finger protein 825
chr13	74706767	74711858	-	74704328	74711858	A3SS	0.5	50	50	ENSMUST00000222092.2	ENSMUSG00000113047.2	Gm47469	chr13	lncRNA	predicted gene, 47469
chr13	74758445	74765321	-	74758445;74759506	74759383;74765321	ES	0.25	50	50	ENSMUST00000221389.2	ENSMUSG00000113204.2	Gm46430	chr13	lncRNA	predicted gene, 46430
chr13	74765406	74765904	-	74765406;74765635	74765509;74765904	ES	0.5	50	50	ENSMUST00000221389.2	ENSMUSG00000113204.2	Gm46430	chr13	lncRNA	predicted gene, 46430
chr13	74758445;74761067	74760843;74765321	-	74758445;74759506	74759383;74765321	MXE	0.5	100	100	ENSMUST00000221389.2	ENSMUSG00000113204.2	Gm46430	chr13	lncRNA	predicted gene, 46430
chr13	74759506;74761067	74760843;74765321	-	74759506	74765321	cassetteExon	0.5	100	100	ENSMUST00000221389.2	ENSMUSG00000113204.2	Gm46430	chr13	lncRNA	predicted gene, 46430
chr13	74757301	74758319	-	74740209	74758319	A3SS	0.5	50	50	ENSMUST00000221389.2	ENSMUSG00000113204.2	Gm46430	chr13	lncRNA	predicted gene, 46430
chr13	74759440	74765321	-	74759506	74765321	A3SS	0.25	50	50	ENSMUST00000221389.2	ENSMUSG00000113204.2	Gm46430	chr13	lncRNA	predicted gene, 46430
chr13	74758445	74760843	-	74758445;74759440	74759383;74760843	ES	0.33	50	50	ENSMUST00000222254.2	ENSMUSG00000113204.2	Gm46430	chr13	lncRNA	predicted gene, 46430
chr13	74759440	74765321	-	74759440;74761067	74760843;74765321	ES	0.25	50	50	ENSMUST00000222254.2	ENSMUSG00000113204.2	Gm46430	chr13	lncRNA	predicted gene, 46430
chr13	74759506	74760843	-	74759440	74760843	A3SS	0.33	50	50	ENSMUST00000222254.2	ENSMUSG00000113204.2	Gm46430	chr13	lncRNA	predicted gene, 46430
chr13	74759506	74765321	-	74761067	74765321	A3SS&ES	0.25	50	50	ENSMUST00000222254.2	ENSMUSG00000113204.2	Gm46430	chr13	lncRNA	predicted gene, 46430
chr13	74758445	74760843	-	74758445;74759506	74759383;74760843	ES	0.33	50	50	ENSMUST00000220478.2	ENSMUSG00000113204.2	Gm46430	chr13	lncRNA	predicted gene, 46430
chr13	74759440	74765321	-	74761067	74765321	A3SS&ES	0.25	50	50	ENSMUST00000220478.2	ENSMUSG00000113204.2	Gm46430	chr13	lncRNA	predicted gene, 46430
chr13	74758445	74765321	-	74758445;74761067	74760843;74765321	ES	0.25	50	50	ENSMUST00000222003.2	ENSMUSG00000113204.2	Gm46430	chr13	lncRNA	predicted gene, 46430
chr13	74758445;74759440	74759383;74765321	-	74758445;74761067	74760843;74765321	MXE	0.5	100	100	ENSMUST00000222003.2	ENSMUSG00000113204.2	Gm46430	chr13	lncRNA	predicted gene, 46430
chr13	74758445;74759440	74759383;74765321	-	74758445	74765321	cassetteExon	0.5	100	100	ENSMUST00000221506.2	ENSMUSG00000113204.2	Gm46430	chr13	lncRNA	predicted gene, 46430
chr13	74758445	74765321	-	74761067	74765321	3pMXE	0.25	50	50	ENSMUST00000222064.2	ENSMUSG00000113204.2	Gm46430	chr13	lncRNA	predicted gene, 46430
chr13	74788012	74805752	+	74788012;74794833	74794290;74805752	ES	0.5	50	50	ENSMUST00000169114.3	ENSMUSG00000021583.8	Erap1	chr13	protein_coding	endoplasmic reticulum aminopeptidase 1
chr13	74814349	74814837	+	74814349;74814694	74814563;74814837	ES	0.5	50	50	ENSMUST00000169114.3	ENSMUSG00000021583.8	Erap1	chr13	protein_coding	endoplasmic reticulum aminopeptidase 1
chr13	74811682	74811796	+	74811682	74812228	A3SS	0.5	50	50	ENSMUST00000169114.3	ENSMUSG00000021583.8	Erap1	chr13	protein_coding	endoplasmic reticulum aminopeptidase 1
chr13	74788056	74794290	+	74788012	74794290	A5SS	0.5	50	50	ENSMUST00000169114.3	ENSMUSG00000021583.8	Erap1	chr13	protein_coding	endoplasmic reticulum aminopeptidase 1
chr13	74788012	74794290	+	74788012	74805752	A3SS	0.5	50	50	ENSMUST00000221822.2	ENSMUSG00000021583.8	Erap1	chr13	protein_coding	endoplasmic reticulum aminopeptidase 1
chr13	74794833	74805752	+	74788012	74805752	A5SS	0.5	50	50	ENSMUST00000221822.2	ENSMUSG00000021583.8	Erap1	chr13	protein_coding	endoplasmic reticulum aminopeptidase 1
chr13	74848835	74850677	-	74848835;74849370	74849335;74850677	ES	0.5	50	50	ENSMUST00000222588.2	ENSMUSG00000021585.11	Cast	chr13	protein_coding	calpastatin
chr13	74902489	74928622	-	74902489	74918665	5pMXE	0.5	50	50	ENSMUST00000222588.2	ENSMUSG00000021585.11	Cast	chr13	protein_coding	calpastatin
chr13	74896362;74896980	74896924;74902430	-	74896362	74902430	cassetteExon	0.5	100	100	ENSMUST00000222588.2	ENSMUSG00000021585.11	Cast	chr13	protein_coding	calpastatin
chr13	74852321	74861765	-	74852324	74861765	A3SS	0.5	50	50	ENSMUST00000222588.2	ENSMUSG00000021585.11	Cast	chr13	protein_coding	calpastatin
chr13	74880296	74882132	-	74880296	74883349	A5SS	0.33	50	50	ENSMUST00000222588.2	ENSMUSG00000021585.11	Cast	chr13	protein_coding	calpastatin
chr13	74880296	74882177	-	74880296	74883349	A5SS	0.33	50	50	ENSMUST00000222588.2	ENSMUSG00000021585.11	Cast	chr13	protein_coding	calpastatin
chr13	74946837	74955938	-	74946837	74956555	A5SS	0.5	50	50	ENSMUST00000223206.2	ENSMUSG00000021585.11	Cast	chr13	protein_coding	calpastatin
chr13	74880296	74882177	-	74880296	74882132	A5SS	0.33	50	50	ENSMUST00000220738.2	ENSMUSG00000021585.11	Cast	chr13	protein_coding	calpastatin
chr13	75259109	75263356	+	75259109;75260873	75260661;75263356	ES	0.5	50	50	ENSMUST00000022075.6	ENSMUSG00000021587.6	Pcsk1	chr13	protein_coding	proprotein convertase subtilisin/kexin type 1
chr13	75855916	75894411	+	75855916;75873119	75873072;75894411	ES	0.5	50	50	ENSMUST00000001583.8	ENSMUSG00000001542.8	Ell2	chr13	protein_coding	elongation factor for RNA polymerase II 2
chr13	75873119	75898044	+	75873119;75894532	75894411;75898044	ES	0.5	50	50	ENSMUST00000001583.8	ENSMUSG00000001542.8	Ell2	chr13	protein_coding	elongation factor for RNA polymerase II 2
chr13	75894532	75904394	+	75894532;75898207	75898044;75904394	ES	0.33	50	50	ENSMUST00000001583.8	ENSMUSG00000001542.8	Ell2	chr13	protein_coding	elongation factor for RNA polymerase II 2
chr13	75894532	75919601	+	75894532	75898044	A3SS&ES	0.33	50	50	ENSMUST00000001583.8	ENSMUSG00000001542.8	Ell2	chr13	protein_coding	elongation factor for RNA polymerase II 2
chr13	75855916;75894532	75894411;75904394	+	75855916;75873119	75873072;75904394	MXE	0.5	100	100	ENSMUST00000220572.2	ENSMUSG00000001542.8	Ell2	chr13	protein_coding	elongation factor for RNA polymerase II 2
chr13	75873119;75894532	75894411;75904394	+	75873119	75904394	cassetteExon	0.5	100	100	ENSMUST00000220572.2	ENSMUSG00000001542.8	Ell2	chr13	protein_coding	elongation factor for RNA polymerase II 2
chr13	75873119;75898207	75898044;75904394	+	75873119	75904394	cassetteExon	0.5	100	100	ENSMUST00000220572.2	ENSMUSG00000001542.8	Ell2	chr13	protein_coding	elongation factor for RNA polymerase II 2
chr13	75873119	75898044	+	75873119	75894411	A3SS&ES	0.33	50	50	ENSMUST00000222194.2	ENSMUSG00000001542.8	Ell2	chr13	protein_coding	elongation factor for RNA polymerase II 2
chr13	75873119	75904394	+	75873119	75894411	A3SS&ES	0.33	50	50	ENSMUST00000222194.2	ENSMUSG00000001542.8	Ell2	chr13	protein_coding	elongation factor for RNA polymerase II 2
chr13	75894532	75904394	+	75894532	75919601	A3SS	0.33	50	50	ENSMUST00000222194.2	ENSMUSG00000001542.8	Ell2	chr13	protein_coding	elongation factor for RNA polymerase II 2
chr13	75855916;75873119	75873072;75898044	+	75855916;75894532	75894411;75898044	MXE	0.5	100	100	ENSMUST00000223535.2	ENSMUSG00000001542.8	Ell2	chr13	protein_coding	elongation factor for RNA polymerase II 2
chr13	75855916;75873119	75873072;75904394	+	75855916;75898207	75894411;75904394	MXE	0.5	100	100	ENSMUST00000223535.2	ENSMUSG00000001542.8	Ell2	chr13	protein_coding	elongation factor for RNA polymerase II 2
chr13	75855916;75894532	75894411;75904394	+	75855916;75898207	75873072;75904394	MXE	0.5	100	100	ENSMUST00000222853.2	ENSMUSG00000001542.8	Ell2	chr13	protein_coding	elongation factor for RNA polymerase II 2
chr13	75873119;75894532	75894411;75904394	+	75873119;75898207	75898044;75904394	MXE	0.5	100	100	ENSMUST00000222853.2	ENSMUSG00000001542.8	Ell2	chr13	protein_coding	elongation factor for RNA polymerase II 2
chr13	75873119	75904394	+	75894532	75904394	5pMXE	0.33	50	50	ENSMUST00000222892.2	ENSMUSG00000001542.8	Ell2	chr13	protein_coding	elongation factor for RNA polymerase II 2
chr13	75995417	75997345	+	75995417	75997363	A3SS	0.5	50	50	ENSMUST00000022082.8	ENSMUSG00000021591.9	Glrx	chr13	protein_coding	glutaredoxin
chr13	75995307	75997363	+	75995417	75997363	A5SS	0.5	50	50	ENSMUST00000022082.8	ENSMUSG00000021591.9	Glrx	chr13	protein_coding	glutaredoxin
chr13	76020580;76022664	76022573;76024290	-	76020580	76024290	cassetteExon	0.5	100	100	ENSMUST00000022078.12	ENSMUSG00000021589.14	Rhobtb3	chr13	protein_coding	Rho-related BTB domain containing 3
chr13	76025658	76027021	-	76025658	76026916	A5SS	0.5	50	50	ENSMUST00000022078.12	ENSMUSG00000021589.14	Rhobtb3	chr13	protein_coding	Rho-related BTB domain containing 3
chr13	76027089	76033737	-	76027089	76041025	A5SS	0.5	50	50	ENSMUST00000022078.12	ENSMUSG00000021589.14	Rhobtb3	chr13	protein_coding	Rho-related BTB domain containing 3
chr13	76050409	76058969	-	76050409	76058749	A5SS	0.5	50	50	ENSMUST00000022078.12	ENSMUSG00000021589.14	Rhobtb3	chr13	protein_coding	Rho-related BTB domain containing 3
chr13	76125896	76126020	+	76125896	76141133	A3SS	0.5	50	50	ENSMUST00000022081.3	ENSMUSG00000021590.8	Spata9	chr13	protein_coding	spermatogenesis associated 9
chr13	76156405	76166777	-	76156405	76165640	5pMXE	0.33	50	50	ENSMUST00000050997.2	ENSMUSG00000043190.15	Rfesd	chr13	protein_coding	Rieske (Fe-S) domain containing
chr13	76156405	76166134	-	76156405	76165640	A5SS	0.33	50	50	ENSMUST00000050997.2	ENSMUSG00000043190.15	Rfesd	chr13	protein_coding	Rieske (Fe-S) domain containing
chr13	76156405	76166777	-	76156405	76166134	A5SS	0.33	50	50	ENSMUST00000179078.9	ENSMUSG00000043190.15	Rfesd	chr13	protein_coding	Rieske (Fe-S) domain containing
chr13	76239936	76246493	-	76239936;76242136	76242007;76246493	ES	0.5	50	50	ENSMUST00000239063.2	ENSMUSG00000021592.19	Arsk	chr13	protein_coding	arylsulfatase K
chr13	76217807	76222894	-	76220390	76222894	A3SS&ES	0.5	50	50	ENSMUST00000239063.2	ENSMUSG00000021592.19	Arsk	chr13	protein_coding	arylsulfatase K
chr13	76237468	76239777	-	76223170	76239777	A3SS	0.5	50	50	ENSMUST00000239063.2	ENSMUSG00000021592.19	Arsk	chr13	protein_coding	arylsulfatase K
chr13	76223170	76225408	-	76223170	76239777	A5SS	0.5	50	50	ENSMUST00000239063.2	ENSMUSG00000021592.19	Arsk	chr13	protein_coding	arylsulfatase K
chr13	76270894	76272880	+	76270894;76271662	76271561;76272880	ES	0.5	50	50	ENSMUST00000091466.4	ENSMUSG00000033991.10	Ttc37	chr13	protein_coding	tetratricopeptide repeat domain 37
chr13	76277503	76278320	+	76277658	76278320	A5SS	0.5	50	50	ENSMUST00000091466.4	ENSMUSG00000033991.10	Ttc37	chr13	protein_coding	tetratricopeptide repeat domain 37
chr13	76328635	76330934	+	76328315	76330934	A5SS	0.5	50	50	ENSMUST00000091466.4	ENSMUSG00000033991.10	Ttc37	chr13	protein_coding	tetratricopeptide repeat domain 37
chr13	76394441	76397851	-	76394441	76399780	A5SS	0.5	50	50	ENSMUST00000208418.2	ENSMUSG00000109228.3	Fam81b	chr13	protein_coding	family with sequence similarity 81, member B
chr13	76413888	76426888	+	76413888	76418758	3pMXE	0.5	50	50	ENSMUST00000224604.2	ENSMUSG00000114242.2	Gm31219	chr13	lncRNA	predicted gene, 31219
chr13	76871898	76905105	+	76871898;76879928	76879890;76905105	ES	0.33	50	50	ENSMUST00000125209.8	ENSMUSG00000021596.17	Mctp1	chr13	protein_coding	multiple C2 domains, transmembrane 1
chr13	76871898;76889472	76889413;76905105	+	76871898;76879928	76879890;76905105	MXE	0.5	100	100	ENSMUST00000125209.8	ENSMUSG00000021596.17	Mctp1	chr13	protein_coding	multiple C2 domains, transmembrane 1
chr13	76907939	76910509	+	76907939	76949478	A3SS	0.5	50	50	ENSMUST00000125209.8	ENSMUSG00000021596.17	Mctp1	chr13	protein_coding	multiple C2 domains, transmembrane 1
chr13	76727936	76789831	+	76533370	76789831	A5SS	0.5	50	50	ENSMUST00000125209.8	ENSMUSG00000021596.17	Mctp1	chr13	protein_coding	multiple C2 domains, transmembrane 1
chr13	76871898;76889472	76889413;76905105	+	76871898	76905105	cassetteExon	0.5	100	100	ENSMUST00000126960.8	ENSMUSG00000021596.17	Mctp1	chr13	protein_coding	multiple C2 domains, transmembrane 1
chr13	76871898	76889413	+	76871898	76879890	3pMXE	0.33	50	50	ENSMUST00000109589.3	ENSMUSG00000021596.17	Mctp1	chr13	protein_coding	multiple C2 domains, transmembrane 1
chr13	76871898	76905105	+	76871898	76879890	3pMXE	0.33	50	50	ENSMUST00000109589.3	ENSMUSG00000021596.17	Mctp1	chr13	protein_coding	multiple C2 domains, transmembrane 1
chr13	77254223	77273349	-	77254223;77260853	77260691;77273349	ES	0.5	50	50	ENSMUST00000151524.9	ENSMUSG00000021597.17	Slf1	chr13	protein_coding	SMC5-SMC6 complex localization factor 1
chr13	77274833	77279363	-	77274833	77283472	A5SS	0.33	50	50	ENSMUST00000151524.9	ENSMUSG00000021597.17	Slf1	chr13	protein_coding	SMC5-SMC6 complex localization factor 1
chr13	77274833	77282885	-	77274833	77283472	A5SS	0.33	50	50	ENSMUST00000151524.9	ENSMUSG00000021597.17	Slf1	chr13	protein_coding	SMC5-SMC6 complex localization factor 1
chr13	77274833	77282885	-	77274833	77279363	5pMXE	0.33	50	50	ENSMUST00000159300.8	ENSMUSG00000021597.17	Slf1	chr13	protein_coding	SMC5-SMC6 complex localization factor 1
chr13	77341342	77402242	+	77341342;77393481	77393320;77402242	ES	0.5	50	50	ENSMUST00000168779.3	ENSMUSG00000071252.7	2210408I21Rik	chr13	protein_coding	RIKEN cDNA 2210408I21 gene
chr13	77323103;77327178	77327008;77331720	+	77323103	77331720	cassetteExon	0.5	100	100	ENSMUST00000168779.3	ENSMUSG00000071252.7	2210408I21Rik	chr13	protein_coding	RIKEN cDNA 2210408I21 gene
chr13	77856972	77890882	+	77856972	77871776	3pMXE	0.25	50	50	ENSMUST00000225709.2	ENSMUSG00000064138.15	Fam172a	chr13	protein_coding	family with sequence similarity 172, member A
chr13	77856972	77907547	+	77856972	77871776	3pMXE	0.25	50	50	ENSMUST00000225709.2	ENSMUSG00000064138.15	Fam172a	chr13	protein_coding	family with sequence similarity 172, member A
chr13	77856972	77973442	+	77856972	77871776	3pMXE	0.25	50	50	ENSMUST00000225709.2	ENSMUSG00000064138.15	Fam172a	chr13	protein_coding	family with sequence similarity 172, member A
chr13	77856972	77907547	+	77856972;77891005	77890882;77907547	ES	0.5	50	50	ENSMUST00000163257.9	ENSMUSG00000064138.15	Fam172a	chr13	protein_coding	family with sequence similarity 172, member A
chr13	77907648	77973442	+	77907648;77910057	77909957;77973442	ES	0.25	50	50	ENSMUST00000163257.9	ENSMUSG00000064138.15	Fam172a	chr13	protein_coding	family with sequence similarity 172, member A
chr13	77973507	78050773	+	77973507;77982820	77982629;78050773	ES	0.33	50	50	ENSMUST00000163257.9	ENSMUSG00000064138.15	Fam172a	chr13	protein_coding	family with sequence similarity 172, member A
chr13	77910057;77950622	77950574;77973442	+	77910057	77973442	cassetteExon	0.5	100	100	ENSMUST00000163257.9	ENSMUSG00000064138.15	Fam172a	chr13	protein_coding	family with sequence similarity 172, member A
chr13	77982820	77985351	+	77982820	78050773	A3SS	0.5	50	50	ENSMUST00000163257.9	ENSMUSG00000064138.15	Fam172a	chr13	protein_coding	family with sequence similarity 172, member A
chr13	77982740	78050773	+	77982820	78050773	A5SS	0.33	50	50	ENSMUST00000163257.9	ENSMUSG00000064138.15	Fam172a	chr13	protein_coding	family with sequence similarity 172, member A
chr13	77973507;77982740	77982629;78050773	+	77973507	78050773	cassetteExon	0.5	100	100	ENSMUST00000099358.5	ENSMUSG00000064138.15	Fam172a	chr13	protein_coding	family with sequence similarity 172, member A
chr13	77856972	77973442	+	77856972;77907648	77907547;77973442	ES	0.25	50	50	ENSMUST00000225623.2	ENSMUSG00000064138.15	Fam172a	chr13	protein_coding	family with sequence similarity 172, member A
chr13	77950622	77973442	+	77907648	77973442	A5SS	0.25	50	50	ENSMUST00000225623.2	ENSMUSG00000064138.15	Fam172a	chr13	protein_coding	family with sequence similarity 172, member A
chr13	77856972	77890882	+	77856972	77973442	A3SS	0.25	50	50	ENSMUST00000224889.2	ENSMUSG00000064138.15	Fam172a	chr13	protein_coding	family with sequence similarity 172, member A
chr13	77910057	77973442	+	77856972	77973442	A5SS	0.25	50	50	ENSMUST00000224889.2	ENSMUSG00000064138.15	Fam172a	chr13	protein_coding	family with sequence similarity 172, member A
chr13	77950622	77973442	+	77856972	77973442	A5SS	0.25	50	50	ENSMUST00000224889.2	ENSMUSG00000064138.15	Fam172a	chr13	protein_coding	family with sequence similarity 172, member A
chr13	77907648	77973442	+	77907648	77909957	3pMXE	0.5	50	50	ENSMUST00000224013.2	ENSMUSG00000064138.15	Fam172a	chr13	protein_coding	family with sequence similarity 172, member A
chr13	78273017	78331093	-	78273017;78318092	78317970;78331093	ES	0.5	50	50	ENSMUST00000224734.2	ENSMUSG00000114401.2	Gm38604	chr13	lncRNA	predicted gene, 38604
chr13	78338132	78338337	-	78338132	78343281	A5SS	0.5	50	50	ENSMUST00000091458.13	ENSMUSG00000069171.15	Nr2f1	chr13	protein_coding	nuclear receptor subfamily 2, group F, member 1
chr13	78343808	78343960	-	78343808	78346239	A5SS	0.25	50	50	ENSMUST00000091458.13	ENSMUSG00000069171.15	Nr2f1	chr13	protein_coding	nuclear receptor subfamily 2, group F, member 1
chr13	78343808	78344461	-	78343808	78346239	A5SS	0.25	50	50	ENSMUST00000091458.13	ENSMUSG00000069171.15	Nr2f1	chr13	protein_coding	nuclear receptor subfamily 2, group F, member 1
chr13	78343808	78345929	-	78343808	78346239	A5SS	0.25	50	50	ENSMUST00000091458.13	ENSMUSG00000069171.15	Nr2f1	chr13	protein_coding	nuclear receptor subfamily 2, group F, member 1
chr13	78343808	78345929	-	78343808	78343960	5pMXE	0.25	50	50	ENSMUST00000150498.8	ENSMUSG00000069171.15	Nr2f1	chr13	protein_coding	nuclear receptor subfamily 2, group F, member 1
chr13	78343808	78344461	-	78343808	78343960	A5SS	0.25	50	50	ENSMUST00000150498.8	ENSMUSG00000069171.15	Nr2f1	chr13	protein_coding	nuclear receptor subfamily 2, group F, member 1
chr13	78343808	78344461	-	78343808	78345929	A5SS	0.25	50	50	ENSMUST00000127137.3	ENSMUSG00000069171.15	Nr2f1	chr13	protein_coding	nuclear receptor subfamily 2, group F, member 1
chr13	78347950	78379337	+	78346341	78379337	A5SS	0.2	50	50	ENSMUST00000145613.8	ENSMUSG00000087143.10	A830082K12Rik	chr13	lncRNA	RIKEN cDNA A830082K12 gene
chr13	78350272	78379337	+	78346341	78379337	A5SS	0.2	50	50	ENSMUST00000145613.8	ENSMUSG00000087143.10	A830082K12Rik	chr13	lncRNA	RIKEN cDNA A830082K12 gene
chr13	78350596	78379337	+	78346341	78379337	A5SS	0.2	50	50	ENSMUST00000145613.8	ENSMUSG00000087143.10	A830082K12Rik	chr13	lncRNA	RIKEN cDNA A830082K12 gene
chr13	78350977	78379337	+	78346341	78379337	A5SS	0.2	50	50	ENSMUST00000145613.8	ENSMUSG00000087143.10	A830082K12Rik	chr13	lncRNA	RIKEN cDNA A830082K12 gene
chr13	78350272	78379337	+	78347950	78379337	A5SS	0.2	50	50	ENSMUST00000144545.2	ENSMUSG00000087143.10	A830082K12Rik	chr13	lncRNA	RIKEN cDNA A830082K12 gene
chr13	78350596	78379337	+	78347950	78379337	A5SS	0.2	50	50	ENSMUST00000144545.2	ENSMUSG00000087143.10	A830082K12Rik	chr13	lncRNA	RIKEN cDNA A830082K12 gene
chr13	78350977	78379337	+	78347950	78379337	A5SS	0.2	50	50	ENSMUST00000144545.2	ENSMUSG00000087143.10	A830082K12Rik	chr13	lncRNA	RIKEN cDNA A830082K12 gene
chr13	78350596	78379337	+	78350272	78379337	A5SS	0.2	50	50	ENSMUST00000131564.8	ENSMUSG00000087143.10	A830082K12Rik	chr13	lncRNA	RIKEN cDNA A830082K12 gene
chr13	78350977	78379337	+	78350272	78379337	A5SS	0.2	50	50	ENSMUST00000131564.8	ENSMUSG00000087143.10	A830082K12Rik	chr13	lncRNA	RIKEN cDNA A830082K12 gene
chr13	78350977	78379337	+	78350596	78379337	A5SS	0.2	50	50	ENSMUST00000123998.2	ENSMUSG00000087143.10	A830082K12Rik	chr13	lncRNA	RIKEN cDNA A830082K12 gene
chr13	78350977	78423407	+	78350977	78379337	3pMXE	0.5	50	50	ENSMUST00000134705.2	ENSMUSG00000087143.10	A830082K12Rik	chr13	lncRNA	RIKEN cDNA A830082K12 gene
chr13	81034262	81035525	+	81032048	81035525	A5SS	0.5	50	50	ENSMUST00000159090.2	ENSMUSG00000074794.11	Arrdc3	chr13	protein_coding	arrestin domain containing 3
chr13	81039343	81039607	+	81039343	81039569	A3SS	0.5	50	50	ENSMUST00000159690.8	ENSMUSG00000074794.11	Arrdc3	chr13	protein_coding	arrestin domain containing 3
chr13	81089416	81090059	+	81089416	81093694	A3SS	0.33	50	50	ENSMUST00000225352.2	ENSMUSG00000114554.2	5430425K12Rik	chr13	lncRNA	RIKEN cDNA 5430425K12 gene
chr13	81089416	81090059	+	81089416	81095983	A3SS	0.33	50	50	ENSMUST00000224538.2	ENSMUSG00000114554.2	5430425K12Rik	chr13	lncRNA	RIKEN cDNA 5430425K12 gene
chr13	81089416	81093694	+	81089416	81095983	A3SS	0.33	50	50	ENSMUST00000224538.2	ENSMUSG00000114554.2	5430425K12Rik	chr13	lncRNA	RIKEN cDNA 5430425K12 gene
chr13	81094236	81095983	+	81089416	81095983	A5SS	0.5	50	50	ENSMUST00000224538.2	ENSMUSG00000114554.2	5430425K12Rik	chr13	lncRNA	RIKEN cDNA 5430425K12 gene
chr13	81272941	81275714	+	81272941	81273834	3pMXE	0.5	50	50	ENSMUST00000181043.8	ENSMUSG00000097098.9	9330111N05Rik	chr13	lncRNA	RIKEN cDNA 9330111N05 gene
chr13	81112512	81226890	+	81112512	81272709	A3SS	0.5	50	50	ENSMUST00000181043.8	ENSMUSG00000097098.9	9330111N05Rik	chr13	lncRNA	RIKEN cDNA 9330111N05 gene
chr13	81129607	81272709	+	81112512	81272709	A5SS	0.5	50	50	ENSMUST00000181043.8	ENSMUSG00000097098.9	9330111N05Rik	chr13	lncRNA	RIKEN cDNA 9330111N05 gene
chr13	81199443	81226890	+	81112512	81226890	A5SS	0.5	50	50	ENSMUST00000180409.2	ENSMUSG00000097098.9	9330111N05Rik	chr13	lncRNA	RIKEN cDNA 9330111N05 gene
chr13	81431591	81499630	-	81431591	81491221	5pMXE	0.25	50	50	ENSMUST00000128120.2	ENSMUSG00000069170.15	Adgrv1	chr13	protein_coding	adhesion G protein-coupled receptor V1
chr13	81431591	81522301	-	81431591	81491221	5pMXE	0.25	50	50	ENSMUST00000128120.2	ENSMUSG00000069170.15	Adgrv1	chr13	protein_coding	adhesion G protein-coupled receptor V1
chr13	81431591	81490867	-	81431591	81491221	A5SS	0.25	50	50	ENSMUST00000128120.2	ENSMUSG00000069170.15	Adgrv1	chr13	protein_coding	adhesion G protein-coupled receptor V1
chr13	81575865;81578718	81578426;81581544	-	81575865	81581544	cassetteExon	0.5	100	100	ENSMUST00000095585.11	ENSMUSG00000069170.15	Adgrv1	chr13	protein_coding	adhesion G protein-coupled receptor V1
chr13	81431591	81490867	-	81431591	81522301	A5SS	0.25	50	50	ENSMUST00000095585.11	ENSMUSG00000069170.15	Adgrv1	chr13	protein_coding	adhesion G protein-coupled receptor V1
chr13	81431591	81499630	-	81431591	81522301	A5SS	0.25	50	50	ENSMUST00000095585.11	ENSMUSG00000069170.15	Adgrv1	chr13	protein_coding	adhesion G protein-coupled receptor V1
chr13	81716853	81718602	-	81716853	81721334	A5SS	0.5	50	50	ENSMUST00000095585.11	ENSMUSG00000069170.15	Adgrv1	chr13	protein_coding	adhesion G protein-coupled receptor V1
chr13	81431591	81490867	-	81431591	81499630	A5SS	0.25	50	50	ENSMUST00000224088.2	ENSMUSG00000069170.15	Adgrv1	chr13	protein_coding	adhesion G protein-coupled receptor V1
chr13	81806055	81813128	+	81806055	81813124	A3SS	0.5	50	50	ENSMUST00000224300.2	ENSMUSG00000035840.8	Lysmd3	chr13	protein_coding	LysM, putative peptidoglycan-binding, domain containing 3
chr13	81813388	81817339	+	81813388	81817280	A3SS	0.33	50	50	ENSMUST00000224300.2	ENSMUSG00000035840.8	Lysmd3	chr13	protein_coding	LysM, putative peptidoglycan-binding, domain containing 3
chr13	81813388	81817483	+	81813388	81817280	A3SS	0.33	50	50	ENSMUST00000224300.2	ENSMUSG00000035840.8	Lysmd3	chr13	protein_coding	LysM, putative peptidoglycan-binding, domain containing 3
chr13	81813388	81817483	+	81813388	81817339	A3SS	0.33	50	50	ENSMUST00000049055.8	ENSMUSG00000035840.8	Lysmd3	chr13	protein_coding	LysM, putative peptidoglycan-binding, domain containing 3
chr13	81842009	81842767	-	81837375	81842767	A3SS	0.5	50	50	ENSMUST00000048993.12	ENSMUSG00000035834.12	Polr3g	chr13	protein_coding	polymerase (RNA) III (DNA directed) polypeptide G
chr13	81859938	81898080	+	81860101	81898080	A5SS	0.5	50	50	ENSMUST00000057598.7	ENSMUSG00000051098.7	Mblac2	chr13	protein_coding	metallo-beta-lactamase domain containing 2
chr13	81931476	81934962	+	81931476;81932895	81932760;81934962	ES	0.5	50	50	ENSMUST00000022009.10	ENSMUSG00000021537.10	Cetn3	chr13	protein_coding	centrin 3
chr13	81935076;81938525	81938290;81940075	+	81935076	81940075	cassetteExon	0.5	100	100	ENSMUST00000022009.10	ENSMUSG00000021537.10	Cetn3	chr13	protein_coding	centrin 3
chr13	81940266	81941083	+	81940266	81944773	A3SS	0.5	50	50	ENSMUST00000022009.10	ENSMUSG00000021537.10	Cetn3	chr13	protein_coding	centrin 3
chr13	81931834	81932760	+	81931476	81932760	A5SS	0.33	50	50	ENSMUST00000022009.10	ENSMUSG00000021537.10	Cetn3	chr13	protein_coding	centrin 3
chr13	81931982	81932760	+	81931476	81932760	A5SS	0.33	50	50	ENSMUST00000022009.10	ENSMUSG00000021537.10	Cetn3	chr13	protein_coding	centrin 3
chr13	81931982	81932760	+	81931834	81932760	A5SS	0.33	50	50	ENSMUST00000224574.2	ENSMUSG00000021537.10	Cetn3	chr13	protein_coding	centrin 3
chr13	81931476	81934962	+	81932895	81934962	5pMXE	0.5	50	50	ENSMUST00000226007.2	ENSMUSG00000021537.10	Cetn3	chr13	protein_coding	centrin 3
chr13	83652495	83723657	+	83652495;83668599	83668504;83723657	ES	0.14	50	50	ENSMUST00000198199.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83668599	83740897	+	83668599;83723849	83723657;83740897	ES	0.5	50	50	ENSMUST00000198199.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83741100	83781174	+	83741100;83773726	83773589;83781174	ES	0.33	50	50	ENSMUST00000198199.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83741100;83773443	83773384;83773589	+	83741100	83773589	cassetteExon	0.5	100	100	ENSMUST00000198199.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83741100;83773527	83773384;83781174	+	83741100;83773726	83773589;83781174	MXE	0.5	100	100	ENSMUST00000198199.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83783588;83791800	83791698;83800933	+	83783588	83800933	cassetteExon	0.5	100	100	ENSMUST00000198199.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83801105;83802740	83802717;83803626	+	83801105	83803626	cassetteExon	0.5	100	100	ENSMUST00000198199.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83668599	83723654	+	83668599	83723657	A3SS	0.33	50	50	ENSMUST00000198199.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83804471	83810426	+	83804471	83810522	A3SS	0.25	50	50	ENSMUST00000198199.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83804471	83810499	+	83804471	83810522	A3SS	0.25	50	50	ENSMUST00000198199.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83804471	83810524	+	83804471	83810522	A3SS	0.25	50	50	ENSMUST00000198199.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83672489	83723657	+	83668599	83723657	A5SS	0.14	50	50	ENSMUST00000198199.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83673199	83723657	+	83668599	83723657	A5SS	0.14	50	50	ENSMUST00000198199.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83678295	83723657	+	83668599	83723657	A5SS	0.14	50	50	ENSMUST00000198199.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83720622	83723657	+	83668599	83723657	A5SS	0.14	50	50	ENSMUST00000198199.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83721893	83723657	+	83668599	83723657	A5SS	0.14	50	50	ENSMUST00000198199.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83741100	83781174	+	83741100;83773527	83773384;83781174	ES	0.33	50	50	ENSMUST00000199450.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83804471	83810499	+	83804471	83810426	A3SS	0.25	50	50	ENSMUST00000199450.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83804471	83810524	+	83804471	83810426	A3SS	0.25	50	50	ENSMUST00000199450.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83652495;83668599	83668504;83740897	+	83652495;83723849	83723657;83740897	MXE	0.5	100	100	ENSMUST00000198916.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83672489	83723657	+	83652495	83723657	A5SS	0.14	50	50	ENSMUST00000198916.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83673199	83723657	+	83652495	83723657	A5SS	0.14	50	50	ENSMUST00000198916.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83678295	83723657	+	83652495	83723657	A5SS	0.14	50	50	ENSMUST00000198916.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83720622	83723657	+	83652495	83723657	A5SS	0.14	50	50	ENSMUST00000198916.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83721893	83723657	+	83652495	83723657	A5SS	0.14	50	50	ENSMUST00000198916.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83668599;83723849	83723654;83740897	+	83668599	83740897	cassetteExon	0.5	100	100	ENSMUST00000200123.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83652495	83723657	+	83652495	83668504	A3SS&ES	0.5	50	50	ENSMUST00000005722.14	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83671671	83723654	+	83668599	83723654	A5SS	0.16	50	50	ENSMUST00000005722.14	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83673199	83723654	+	83668599	83723654	A5SS	0.16	50	50	ENSMUST00000005722.14	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83720622	83723654	+	83668599	83723654	A5SS	0.16	50	50	ENSMUST00000005722.14	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83721893	83723654	+	83668599	83723654	A5SS	0.16	50	50	ENSMUST00000005722.14	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83723294	83723654	+	83668599	83723654	A5SS	0.16	50	50	ENSMUST00000005722.14	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83773527	83781174	+	83773726	83781174	A5SS&ES	0.33	50	50	ENSMUST00000163888.8	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83741100	83773589	+	83741100	83773384	3pMXE	0.33	50	50	ENSMUST00000196493.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83741100	83781174	+	83741100	83773384	3pMXE	0.33	50	50	ENSMUST00000196493.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83673199	83723654	+	83671671	83723654	A5SS	0.16	50	50	ENSMUST00000196493.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83720622	83723654	+	83671671	83723654	A5SS	0.16	50	50	ENSMUST00000196493.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83721893	83723654	+	83671671	83723654	A5SS	0.16	50	50	ENSMUST00000196493.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83723294	83723654	+	83671671	83723654	A5SS	0.16	50	50	ENSMUST00000196493.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83673199	83723657	+	83672489	83723657	A5SS	0.14	50	50	ENSMUST00000200394.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83678295	83723657	+	83672489	83723657	A5SS	0.14	50	50	ENSMUST00000200394.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83720622	83723657	+	83672489	83723657	A5SS	0.14	50	50	ENSMUST00000200394.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83721893	83723657	+	83672489	83723657	A5SS	0.14	50	50	ENSMUST00000200394.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83673199	83723654	+	83673199	83723657	A3SS	0.5	50	50	ENSMUST00000199019.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83678295	83723657	+	83673199	83723657	A5SS	0.14	50	50	ENSMUST00000199019.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83720622	83723657	+	83673199	83723657	A5SS	0.14	50	50	ENSMUST00000199019.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83721893	83723657	+	83673199	83723657	A5SS	0.14	50	50	ENSMUST00000199019.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83720622	83723654	+	83673199	83723654	A5SS	0.16	50	50	ENSMUST00000199105.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83721893	83723654	+	83673199	83723654	A5SS	0.16	50	50	ENSMUST00000199105.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83723294	83723654	+	83673199	83723654	A5SS	0.16	50	50	ENSMUST00000199105.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83741100	83781174	+	83741100	83773589	3pMXE	0.33	50	50	ENSMUST00000198069.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83804471	83810524	+	83804471	83810499	A3SS	0.25	50	50	ENSMUST00000197722.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83741100;83773726	83773384;83781174	+	83741100	83781174	cassetteExon	0.5	100	100	ENSMUST00000199262.2	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83720622	83723657	+	83678295	83723657	A5SS	0.14	50	50	ENSMUST00000198064.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83721893	83723657	+	83678295	83723657	A5SS	0.14	50	50	ENSMUST00000198064.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83720622	83723657	+	83720622	83723654	A3SS	0.5	50	50	ENSMUST00000196730.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83721893	83723654	+	83720622	83723654	A5SS	0.16	50	50	ENSMUST00000196730.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83723294	83723654	+	83720622	83723654	A5SS	0.16	50	50	ENSMUST00000196730.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83721893	83723657	+	83720622	83723657	A5SS	0.14	50	50	ENSMUST00000196207.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83721893	83723657	+	83721893	83723654	A3SS	0.5	50	50	ENSMUST00000197146.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83723294	83723654	+	83721893	83723654	A5SS	0.16	50	50	ENSMUST00000197146.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83668599	83740897	+	83723849	83740897	5pMXE	0.5	50	50	ENSMUST00000195904.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83741100	83781174	+	83773726	83781174	5pMXE	0.33	50	50	ENSMUST00000200138.5	ENSMUSG00000005583.17	Mef2c	chr13	protein_coding	myocyte enhancer factor 2C
chr13	83882825	84020775	+	83882825	83886289	3pMXE	0.5	50	50	ENSMUST00000131907.9	ENSMUSG00000050334.13	C130071C03Rik	chr13	lncRNA	RIKEN cDNA C130071C03 gene
chr13	83878433	83880822	+	83869774	83880822	A5SS	0.5	50	50	ENSMUST00000131907.9	ENSMUSG00000050334.13	C130071C03Rik	chr13	lncRNA	RIKEN cDNA C130071C03 gene
chr13	83887073	84020775	+	83882825	84020775	A5SS	0.5	50	50	ENSMUST00000185281.7	ENSMUSG00000050334.13	C130071C03Rik	chr13	lncRNA	RIKEN cDNA C130071C03 gene
chr13	84370553	84405880	+	84370553;84399452	84399349;84405880	ES	0.5	50	50	ENSMUST00000224501.2	ENSMUSG00000035762.12	Tmem161b	chr13	protein_coding	transmembrane protein 161B
chr13	84408359	84420290	+	84408359	84432104	A3SS	0.5	50	50	ENSMUST00000224501.2	ENSMUSG00000035762.12	Tmem161b	chr13	protein_coding	transmembrane protein 161B
chr13	84373393	84399349	+	84370553	84399349	A5SS	0.5	50	50	ENSMUST00000224501.2	ENSMUSG00000035762.12	Tmem161b	chr13	protein_coding	transmembrane protein 161B
chr13	84430981	84432104	+	84408359	84432104	A5SS	0.33	50	50	ENSMUST00000224501.2	ENSMUSG00000035762.12	Tmem161b	chr13	protein_coding	transmembrane protein 161B
chr13	84431483	84432104	+	84408359	84432104	A5SS	0.33	50	50	ENSMUST00000224501.2	ENSMUSG00000035762.12	Tmem161b	chr13	protein_coding	transmembrane protein 161B
chr13	84430981	84432104	+	84430981;84431483	84431423;84432104	ES	0.33	50	50	ENSMUST00000057495.10	ENSMUSG00000035762.12	Tmem161b	chr13	protein_coding	transmembrane protein 161B
chr13	84420446	84430868	+	84420446	84430830	A3SS	0.5	50	50	ENSMUST00000057495.10	ENSMUSG00000035762.12	Tmem161b	chr13	protein_coding	transmembrane protein 161B
chr13	84432304	84434804	+	84432244	84434804	A5SS	0.5	50	50	ENSMUST00000057495.10	ENSMUSG00000035762.12	Tmem161b	chr13	protein_coding	transmembrane protein 161B
chr13	84370553	84405880	+	84399452	84405880	5pMXE	0.5	50	50	ENSMUST00000225708.2	ENSMUSG00000035762.12	Tmem161b	chr13	protein_coding	transmembrane protein 161B
chr13	85360033	85371330	+	85360033	85360859	3pMXE	0.5	50	50	ENSMUST00000022030.11	ENSMUSG00000021548.11	Ccnh	chr13	protein_coding	cyclin H
chr13	85344444	85345650	+	85344444	85345470	A3SS	0.5	50	50	ENSMUST00000022030.11	ENSMUSG00000021548.11	Ccnh	chr13	protein_coding	cyclin H
chr13	85345680	85350560	+	85345680	85350452	A3SS	0.5	50	50	ENSMUST00000022030.11	ENSMUSG00000021548.11	Ccnh	chr13	protein_coding	cyclin H
chr13	85359474	85359973	+	85357008	85359973	A5SS	0.5	50	50	ENSMUST00000022030.11	ENSMUSG00000021548.11	Ccnh	chr13	protein_coding	cyclin H
chr13	86193988	86194720	-	86193988	86194383	5pMXE	0.5	50	50	ENSMUST00000078764.9	ENSMUSG00000017778.15	Cox7c	chr13	protein_coding	cytochrome c oxidase subunit 7C
chr13	86193972	86194720	-	86193988	86194720	A3SS	0.5	50	50	ENSMUST00000131011.2	ENSMUSG00000017778.15	Cox7c	chr13	protein_coding	cytochrome c oxidase subunit 7C
chr13	89093067	89190551	+	89093067;89125903	89125874;89190551	ES	0.5	50	50	ENSMUST00000118731.8	ENSMUSG00000034488.15	Edil3	chr13	protein_coding	EGF-like repeats and discoidin I-like domains 3
chr13	89332982	89437538	+	89332982	89347584	3pMXE	0.5	50	50	ENSMUST00000118731.8	ENSMUSG00000034488.15	Edil3	chr13	protein_coding	EGF-like repeats and discoidin I-like domains 3
chr13	88970167	88976502	+	88970167	89092939	A3SS	0.5	50	50	ENSMUST00000118731.8	ENSMUSG00000034488.15	Edil3	chr13	protein_coding	EGF-like repeats and discoidin I-like domains 3
chr13	89093067	89190551	+	89093067	89125874	3pMXE	0.5	50	50	ENSMUST00000134241.8	ENSMUSG00000034488.15	Edil3	chr13	protein_coding	EGF-like repeats and discoidin I-like domains 3
chr13	89833311	89851037	-	89833311;89841620	89836404;89851037	ES	0.5	50	50	ENSMUST00000109546.9	ENSMUSG00000021614.17	Vcan	chr13	protein_coding	versican
chr13	89841620	89860324	-	89841620;89853916	89851037;89860324	ES	0.33	50	50	ENSMUST00000109546.9	ENSMUSG00000021614.17	Vcan	chr13	protein_coding	versican
chr13	89826276	89826993	-	89826276	89827919	A5SS	0.5	50	50	ENSMUST00000109546.9	ENSMUSG00000021614.17	Vcan	chr13	protein_coding	versican
chr13	89879653	89888208	-	89879653	89890192	A5SS	0.5	50	50	ENSMUST00000109546.9	ENSMUSG00000021614.17	Vcan	chr13	protein_coding	versican
chr13	89833311	89860324	-	89833311;89841620	89836404;89860324	ES	0.33	50	50	ENSMUST00000159910.8	ENSMUSG00000021614.17	Vcan	chr13	protein_coding	versican
chr13	89853916	89860324	-	89841620	89860324	A3SS	0.33	50	50	ENSMUST00000159910.8	ENSMUSG00000021614.17	Vcan	chr13	protein_coding	versican
chr13	89833311	89851037	-	89833311	89836404	A5SS&ES	0.33	50	50	ENSMUST00000159910.8	ENSMUSG00000021614.17	Vcan	chr13	protein_coding	versican
chr13	89841620	89851037	-	89841620	89860324	A5SS	0.5	50	50	ENSMUST00000159910.8	ENSMUSG00000021614.17	Vcan	chr13	protein_coding	versican
chr13	89833311	89860324	-	89833311;89853916	89851037;89860324	ES	0.33	50	50	ENSMUST00000109544.9	ENSMUSG00000021614.17	Vcan	chr13	protein_coding	versican
chr13	89841620	89851037	-	89833311	89851037	A3SS	0.5	50	50	ENSMUST00000109544.9	ENSMUSG00000021614.17	Vcan	chr13	protein_coding	versican
chr13	89841620	89860324	-	89833311	89860324	A3SS	0.33	50	50	ENSMUST00000109543.9	ENSMUSG00000021614.17	Vcan	chr13	protein_coding	versican
chr13	89853916	89860324	-	89833311	89860324	A3SS	0.33	50	50	ENSMUST00000109543.9	ENSMUSG00000021614.17	Vcan	chr13	protein_coding	versican
chr13	89833311	89836404	-	89833311	89860324	A5SS	0.33	50	50	ENSMUST00000109543.9	ENSMUSG00000021614.17	Vcan	chr13	protein_coding	versican
chr13	89833311	89851037	-	89833311	89860324	A5SS	0.33	50	50	ENSMUST00000109543.9	ENSMUSG00000021614.17	Vcan	chr13	protein_coding	versican
chr13	89887709	90034690	+	89887709	89938223	3pMXE	0.5	50	50	ENSMUST00000044500.6	ENSMUSG00000089940.2	Gm4117	chr13	lncRNA	predicted gene 4117
chr13	90219808;90225211	90225122;90237616	-	90219808	90237616	cassetteExon	0.5	100	100	ENSMUST00000159199.8	ENSMUSG00000021615.14	Xrcc4	chr13	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 4
chr13	89997582	90089081	-	89926929	90089081	A3SS	0.5	50	50	ENSMUST00000159199.8	ENSMUSG00000021615.14	Xrcc4	chr13	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 4
chr13	90219808	90237129	-	90219808	90237616	A5SS	0.33	50	50	ENSMUST00000159199.8	ENSMUSG00000021615.14	Xrcc4	chr13	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 4
chr13	90219808	90237129	-	90219808	90225122	A5SS&ES	0.33	50	50	ENSMUST00000160232.8	ENSMUSG00000021615.14	Xrcc4	chr13	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 4
chr13	90249061	90267459	+	90249061	90252494	3pMXE	0.33	50	50	ENSMUST00000161568.8	ENSMUSG00000012422.15	Tmem167	chr13	protein_coding	transmembrane protein 167
chr13	90249061	90251407	+	90249061	90252494	A3SS	0.33	50	50	ENSMUST00000161568.8	ENSMUSG00000012422.15	Tmem167	chr13	protein_coding	transmembrane protein 167
chr13	90249061	90251407	+	90249061	90267459	A3SS	0.33	50	50	ENSMUST00000161457.8	ENSMUSG00000012422.15	Tmem167	chr13	protein_coding	transmembrane protein 167
chr13	91031972	91046760	-	91031972;91039139	91039089;91046760	ES	0.5	50	50	ENSMUST00000183162.8	ENSMUSG00000078958.10	Atp6ap1l	chr13	protein_coding	ATPase, H+ transporting, lysosomal accessory protein 1-like
chr13	91047674	91053317	-	91047674	91047910	5pMXE	0.5	50	50	ENSMUST00000183162.8	ENSMUSG00000078958.10	Atp6ap1l	chr13	protein_coding	ATPase, H+ transporting, lysosomal accessory protein 1-like
chr13	91031972;91034913	91034673;91039089	-	91031972	91039089	cassetteExon	0.5	100	100	ENSMUST00000183162.8	ENSMUSG00000078958.10	Atp6ap1l	chr13	protein_coding	ATPase, H+ transporting, lysosomal accessory protein 1-like
chr13	91047065	91047613	-	91046977	91047613	A3SS	0.5	50	50	ENSMUST00000183162.8	ENSMUSG00000078958.10	Atp6ap1l	chr13	protein_coding	ATPase, H+ transporting, lysosomal accessory protein 1-like
chr13	91047674;91047950	91047910;91053317	-	91047674	91053317	cassetteExon	0.5	100	100	ENSMUST00000182446.2	ENSMUSG00000078958.10	Atp6ap1l	chr13	protein_coding	ATPase, H+ transporting, lysosomal accessory protein 1-like
chr13	91031972	91034673	-	91031972	91046760	A5SS	0.33	50	50	ENSMUST00000182104.2	ENSMUSG00000078958.10	Atp6ap1l	chr13	protein_coding	ATPase, H+ transporting, lysosomal accessory protein 1-like
chr13	91071525	91071706	+	91071318	91071706	A5SS	0.5	50	50	ENSMUST00000051955.9	ENSMUSG00000049517.9	Rps23	chr13	protein_coding	ribosomal protein S23
chr13	91170786	91302336	-	91170786;91189107	91188969;91302336	ES	0.5	50	50	ENSMUST00000022119.6	ENSMUSG00000021619.7	Atg10	chr13	protein_coding	autophagy related 10
chr13	91189107	91273595	-	91189107	91302336	A5SS	0.5	50	50	ENSMUST00000022119.6	ENSMUSG00000021619.7	Atg10	chr13	protein_coding	autophagy related 10
chr13	91712813	91812237	+	91712813;91790510	91790421;91812237	ES	0.5	50	50	ENSMUST00000156547.8	ENSMUSG00000003992.16	Ssbp2	chr13	protein_coding	single-stranded DNA binding protein 2
chr13	91672776;91682310	91682096;91687454	+	91672776	91687454	cassetteExon	0.5	100	100	ENSMUST00000156547.8	ENSMUSG00000003992.16	Ssbp2	chr13	protein_coding	single-stranded DNA binding protein 2
chr13	91790510	91805438	+	91790510	91812237	A3SS	0.5	50	50	ENSMUST00000156547.8	ENSMUSG00000003992.16	Ssbp2	chr13	protein_coding	single-stranded DNA binding protein 2
chr13	91818583	91823153	+	91818583	91823177	A3SS	0.5	50	50	ENSMUST00000156547.8	ENSMUSG00000003992.16	Ssbp2	chr13	protein_coding	single-stranded DNA binding protein 2
chr13	91857433	91889541	-	91852160	91889541	A3SS	0.33	50	50	ENSMUST00000160385.2	ENSMUSG00000074782.4	4833422C13Rik	chr13	lncRNA	RIKEN cDNA 4833422C13 gene
chr13	91863102	91889541	-	91852160	91889541	A3SS	0.33	50	50	ENSMUST00000160385.2	ENSMUSG00000074782.4	4833422C13Rik	chr13	lncRNA	RIKEN cDNA 4833422C13 gene
chr13	91863102	91889541	-	91857433	91889541	A3SS	0.33	50	50	ENSMUST00000161491.2	ENSMUSG00000074782.4	4833422C13Rik	chr13	lncRNA	RIKEN cDNA 4833422C13 gene
chr13	91927564	91929306	+	91923035	91929306	A5SS	0.5	50	50	ENSMUST00000022120.5	ENSMUSG00000021620.5	Acot12	chr13	protein_coding	acyl-CoA thioesterase 12
chr13	91945373	91948730	-	91945373;91947010	91946942;91948730	ES	0.5	50	50	ENSMUST00000022121.13	ENSMUSG00000021621.16	Zcchc9	chr13	protein_coding	zinc finger, CCHC domain containing 9
chr13	91945373	91948730	-	91945373	91946942	A5SS	0.5	50	50	ENSMUST00000178637.8	ENSMUSG00000021621.16	Zcchc9	chr13	protein_coding	zinc finger, CCHC domain containing 9
chr13	91945373	91948730	-	91947010	91948730	3pMXE	0.5	50	50	ENSMUST00000178084.2	ENSMUSG00000021621.16	Zcchc9	chr13	protein_coding	zinc finger, CCHC domain containing 9
chr13	92009955	92010047	+	92009886	92010047	A5SS	0.5	50	50	ENSMUST00000122270.3	ENSMUSG00000082488.3	1700119I11Rik	chr13	lncRNA	RIKEN cDNA 1700119I11 gene
chr13	92159119	92159299	-	92154309	92159299	A3SS	0.5	50	50	ENSMUST00000151408.9	ENSMUSG00000021708.19	Rasgrf2	chr13	protein_coding	RAS protein-specific guanine nucleotide-releasing factor 2
chr13	92349054	92357464	-	92349054;92352149	92351978;92357464	ES	0.5	50	50	ENSMUST00000185852.7	ENSMUSG00000014850.16	Msh3	chr13	protein_coding	mutS homolog 3
chr13	92372236	92386335	-	92372239	92386335	A3SS	0.5	50	50	ENSMUST00000185852.7	ENSMUSG00000014850.16	Msh3	chr13	protein_coding	mutS homolog 3
chr13	92477333	92478754	-	92449194	92478754	A3SS	0.5	50	50	ENSMUST00000185852.7	ENSMUSG00000014850.16	Msh3	chr13	protein_coding	mutS homolog 3
chr13	92484954	92485657	-	92483953	92485657	A3SS	0.5	50	50	ENSMUST00000185852.7	ENSMUSG00000014850.16	Msh3	chr13	protein_coding	mutS homolog 3
chr13	92487868	92489733	-	92487959	92489733	A3SS	0.33	50	50	ENSMUST00000185852.7	ENSMUSG00000014850.16	Msh3	chr13	protein_coding	mutS homolog 3
chr13	92487868	92491271	-	92489850	92491271	A3SS&ES	0.5	50	50	ENSMUST00000185852.7	ENSMUSG00000014850.16	Msh3	chr13	protein_coding	mutS homolog 3
chr13	92483953	92484336	-	92483953	92485657	A5SS	0.5	50	50	ENSMUST00000185852.7	ENSMUSG00000014850.16	Msh3	chr13	protein_coding	mutS homolog 3
chr13	92489850	92490501	-	92489850	92491271	A5SS	0.5	50	50	ENSMUST00000185852.7	ENSMUSG00000014850.16	Msh3	chr13	protein_coding	mutS homolog 3
chr13	92372236	92386335	-	92372236	92377587	5pMXE	0.5	50	50	ENSMUST00000191242.7	ENSMUSG00000014850.16	Msh3	chr13	protein_coding	mutS homolog 3
chr13	92487868	92491271	-	92487868;92489850	92489733;92491271	ES	0.5	50	50	ENSMUST00000191550.7	ENSMUSG00000014850.16	Msh3	chr13	protein_coding	mutS homolog 3
chr13	92487868	92489733	-	92393310	92489733	A3SS	0.33	50	50	ENSMUST00000187874.7	ENSMUSG00000014850.16	Msh3	chr13	protein_coding	mutS homolog 3
chr13	92487959	92489733	-	92393310	92489733	A3SS	0.33	50	50	ENSMUST00000187874.7	ENSMUSG00000014850.16	Msh3	chr13	protein_coding	mutS homolog 3
chr13	92393310	92400229	-	92393310	92489733	A5SS	0.5	50	50	ENSMUST00000187874.7	ENSMUSG00000014850.16	Msh3	chr13	protein_coding	mutS homolog 3
chr13	92483953	92485657	-	92483953;92484954	92484336;92485657	ES	0.5	50	50	ENSMUST00000190393.7	ENSMUSG00000014850.16	Msh3	chr13	protein_coding	mutS homolog 3
chr13	92563193	92563584	+	92562709	92563584	A5SS	0.5	50	50	ENSMUST00000061594.13	ENSMUSG00000045034.13	Ankrd34b	chr13	protein_coding	ankyrin repeat domain 34B
chr13	92604670;92610636	92610471;92614336	-	92604670	92614336	cassetteExon	0.5	100	100	ENSMUST00000225299.2	ENSMUSG00000034334.9	Fam151b	chr13	protein_coding	family with sequence similarity 151, member B
chr13	92650437	92655975	-	92650437;92653200	92653039;92655975	ES	0.5	50	50	ENSMUST00000022217.9	ENSMUSG00000021706.15	Zfyve16	chr13	protein_coding	zinc finger, FYVE domain containing 16
chr13	92644799	92645399	-	92644854	92645399	A3SS	0.5	50	50	ENSMUST00000022217.9	ENSMUSG00000021706.15	Zfyve16	chr13	protein_coding	zinc finger, FYVE domain containing 16
chr13	92650437	92655975	-	92650437	92653039	5pMXE	0.5	50	50	ENSMUST00000156586.8	ENSMUSG00000021706.15	Zfyve16	chr13	protein_coding	zinc finger, FYVE domain containing 16
chr13	92982205	92983326	+	92982205	92983369	A3SS	0.5	50	50	ENSMUST00000223719.2	ENSMUSG00000021704.9	Mtx3	chr13	protein_coding	metaxin 3
chr13	93294721	93296153	-	93291569	93296153	A3SS	0.5	50	50	ENSMUST00000225868.2	ENSMUSG00000042167.7	Tent2	chr13	protein_coding	terminal nucleotidyltransferase 2
chr13	93311226	93312027	-	93311214	93312027	A3SS	0.5	50	50	ENSMUST00000225868.2	ENSMUSG00000042167.7	Tent2	chr13	protein_coding	terminal nucleotidyltransferase 2
chr13	93313766	93320587	-	93312320	93320587	A3SS	0.5	50	50	ENSMUST00000225868.2	ENSMUSG00000042167.7	Tent2	chr13	protein_coding	terminal nucleotidyltransferase 2
chr13	93322984	93328301	-	93322984	93328602	A5SS	0.5	50	50	ENSMUST00000225868.2	ENSMUSG00000042167.7	Tent2	chr13	protein_coding	terminal nucleotidyltransferase 2
chr13	93441810	93478264	+	93437849	93478264	A5SS	0.33	50	50	ENSMUST00000220609.2	ENSMUSG00000007617.19	Homer1	chr13	protein_coding	homer scaffolding protein 1
chr13	93444868	93478264	+	93437849	93478264	A5SS	0.33	50	50	ENSMUST00000220609.2	ENSMUSG00000007617.19	Homer1	chr13	protein_coding	homer scaffolding protein 1
chr13	93492587	93524032	+	93492587	93522853	3pMXE	0.2	50	50	ENSMUST00000109494.8	ENSMUSG00000007617.19	Homer1	chr13	protein_coding	homer scaffolding protein 1
chr13	93492587	93538549	+	93492587	93522853	3pMXE	0.2	50	50	ENSMUST00000109494.8	ENSMUSG00000007617.19	Homer1	chr13	protein_coding	homer scaffolding protein 1
chr13	93492587	93502751	+	93492587	93522853	A3SS	0.2	50	50	ENSMUST00000109494.8	ENSMUSG00000007617.19	Homer1	chr13	protein_coding	homer scaffolding protein 1
chr13	93492587	93502786	+	93492587	93522853	A3SS	0.2	50	50	ENSMUST00000109494.8	ENSMUSG00000007617.19	Homer1	chr13	protein_coding	homer scaffolding protein 1
chr13	93444868	93478264	+	93441810	93478264	A5SS	0.33	50	50	ENSMUST00000109494.8	ENSMUSG00000007617.19	Homer1	chr13	protein_coding	homer scaffolding protein 1
chr13	93492587	93524032	+	93492587	93502786	3pMXE	0.2	50	50	ENSMUST00000109493.9	ENSMUSG00000007617.19	Homer1	chr13	protein_coding	homer scaffolding protein 1
chr13	93492587	93538549	+	93492587	93502786	3pMXE	0.2	50	50	ENSMUST00000109493.9	ENSMUSG00000007617.19	Homer1	chr13	protein_coding	homer scaffolding protein 1
chr13	93492587	93502751	+	93492587	93502786	A3SS	0.2	50	50	ENSMUST00000109493.9	ENSMUSG00000007617.19	Homer1	chr13	protein_coding	homer scaffolding protein 1
chr13	93492587	93524032	+	93492587;93522888	93522853;93524032	ES	0.33	50	50	ENSMUST00000080127.12	ENSMUSG00000007617.19	Homer1	chr13	protein_coding	homer scaffolding protein 1
chr13	93441810;93522888	93522853;93524032	+	93441810	93524032	cassetteExon	0.5	100	100	ENSMUST00000109497.8	ENSMUSG00000007617.19	Homer1	chr13	protein_coding	homer scaffolding protein 1
chr13	93441810	93478264	+	93441810	93524032	A3SS	0.33	50	50	ENSMUST00000109497.8	ENSMUSG00000007617.19	Homer1	chr13	protein_coding	homer scaffolding protein 1
chr13	93483208	93528199	+	93524188	93528199	A5SS&ES	0.5	50	50	ENSMUST00000109497.8	ENSMUSG00000007617.19	Homer1	chr13	protein_coding	homer scaffolding protein 1
chr13	93492587	93524032	+	93441810	93524032	A5SS	0.33	50	50	ENSMUST00000109497.8	ENSMUSG00000007617.19	Homer1	chr13	protein_coding	homer scaffolding protein 1
chr13	93492587	93538549	+	93529616	93538549	A5SS&ES	0.5	50	50	ENSMUST00000109497.8	ENSMUSG00000007617.19	Homer1	chr13	protein_coding	homer scaffolding protein 1
chr13	93441810	93478264	+	93441810	93522853	A3SS	0.33	50	50	ENSMUST00000109498.8	ENSMUSG00000007617.19	Homer1	chr13	protein_coding	homer scaffolding protein 1
chr13	93492587	93522853	+	93441810	93522853	A5SS	0.5	50	50	ENSMUST00000109498.8	ENSMUSG00000007617.19	Homer1	chr13	protein_coding	homer scaffolding protein 1
chr13	93492587	93524032	+	93522888	93524032	A5SS&ES	0.33	50	50	ENSMUST00000109498.8	ENSMUSG00000007617.19	Homer1	chr13	protein_coding	homer scaffolding protein 1
chr13	93441810;93522888	93522853;93524032	+	93441810;93492587	93478264;93524032	MXE	0.5	100	100	ENSMUST00000060490.11	ENSMUSG00000007617.19	Homer1	chr13	protein_coding	homer scaffolding protein 1
chr13	93492587	93502751	+	93492587	93524032	A3SS	0.2	50	50	ENSMUST00000060490.11	ENSMUSG00000007617.19	Homer1	chr13	protein_coding	homer scaffolding protein 1
chr13	93492587	93538549	+	93492587	93502751	3pMXE	0.2	50	50	ENSMUST00000109492.9	ENSMUSG00000007617.19	Homer1	chr13	protein_coding	homer scaffolding protein 1
chr13	93441810;93524188	93524032;93528199	+	93441810;93483208	93478264;93528199	MXE	0.5	100	100	ENSMUST00000109496.8	ENSMUSG00000007617.19	Homer1	chr13	protein_coding	homer scaffolding protein 1
chr13	93483208	93485713	+	93483208	93528199	A3SS	0.5	50	50	ENSMUST00000109496.8	ENSMUSG00000007617.19	Homer1	chr13	protein_coding	homer scaffolding protein 1
chr13	93492587	93524032	+	93492587	93538549	A3SS	0.2	50	50	ENSMUST00000109495.8	ENSMUSG00000007617.19	Homer1	chr13	protein_coding	homer scaffolding protein 1
chr13	93600166	93601075	-	93596297	93601075	A3SS	0.5	50	50	ENSMUST00000065537.9	ENSMUSG00000021690.11	Jmy	chr13	protein_coding	junction-mediating and regulatory protein
chr13	93848468	93848554	+	93847966	93848554	A5SS	0.5	50	50	ENSMUST00000048001.8	ENSMUSG00000042102.8	Dmgdh	chr13	protein_coding	dimethylglycine dehydrogenase precursor
chr13	93998838	94008319	+	93998838	94016996	A3SS	0.5	50	50	ENSMUST00000091403.6	ENSMUSG00000042082.8	Arsb	chr13	protein_coding	arylsulfatase B
chr13	94220109	94257285	+	94194414	94257285	A5SS	0.25	50	50	ENSMUST00000054274.8	ENSMUSG00000045312.13	Lhfpl2	chr13	protein_coding	lipoma HMGIC fusion partner-like 2
chr13	94231013	94257285	+	94194414	94257285	A5SS	0.25	50	50	ENSMUST00000054274.8	ENSMUSG00000045312.13	Lhfpl2	chr13	protein_coding	lipoma HMGIC fusion partner-like 2
chr13	94254537	94257285	+	94194414	94257285	A5SS	0.25	50	50	ENSMUST00000054274.8	ENSMUSG00000045312.13	Lhfpl2	chr13	protein_coding	lipoma HMGIC fusion partner-like 2
chr13	94271431	94310531	+	94257343	94310531	A5SS	0.25	50	50	ENSMUST00000054274.8	ENSMUSG00000045312.13	Lhfpl2	chr13	protein_coding	lipoma HMGIC fusion partner-like 2
chr13	94309642	94310531	+	94257343	94310531	A5SS	0.25	50	50	ENSMUST00000054274.8	ENSMUSG00000045312.13	Lhfpl2	chr13	protein_coding	lipoma HMGIC fusion partner-like 2
chr13	94310437	94310531	+	94257343	94310531	A5SS	0.25	50	50	ENSMUST00000054274.8	ENSMUSG00000045312.13	Lhfpl2	chr13	protein_coding	lipoma HMGIC fusion partner-like 2
chr13	94231013	94257285	+	94220109	94257285	A5SS	0.25	50	50	ENSMUST00000156071.2	ENSMUSG00000045312.13	Lhfpl2	chr13	protein_coding	lipoma HMGIC fusion partner-like 2
chr13	94254537	94257285	+	94220109	94257285	A5SS	0.25	50	50	ENSMUST00000156071.2	ENSMUSG00000045312.13	Lhfpl2	chr13	protein_coding	lipoma HMGIC fusion partner-like 2
chr13	94254537	94257285	+	94231013	94257285	A5SS	0.25	50	50	ENSMUST00000221096.2	ENSMUSG00000045312.13	Lhfpl2	chr13	protein_coding	lipoma HMGIC fusion partner-like 2
chr13	94309642	94310531	+	94271431	94310531	A5SS	0.25	50	50	ENSMUST00000120051.2	ENSMUSG00000045312.13	Lhfpl2	chr13	protein_coding	lipoma HMGIC fusion partner-like 2
chr13	94310437	94310531	+	94271431	94310531	A5SS	0.25	50	50	ENSMUST00000120051.2	ENSMUSG00000045312.13	Lhfpl2	chr13	protein_coding	lipoma HMGIC fusion partner-like 2
chr13	94310437	94310531	+	94309642	94310531	A5SS	0.25	50	50	ENSMUST00000118195.2	ENSMUSG00000045312.13	Lhfpl2	chr13	protein_coding	lipoma HMGIC fusion partner-like 2
chr13	94369688	94382946	-	94369688	94389501	A5SS	0.5	50	50	ENSMUST00000022197.15	ENSMUSG00000021687.15	Scamp1	chr13	protein_coding	secretory carrier membrane protein 1
chr13	94389578	94401481	-	94389578	94421728	A5SS	0.33	50	50	ENSMUST00000022197.15	ENSMUSG00000021687.15	Scamp1	chr13	protein_coding	secretory carrier membrane protein 1
chr13	94389578	94422074	-	94389578	94421728	A5SS	0.33	50	50	ENSMUST00000022197.15	ENSMUSG00000021687.15	Scamp1	chr13	protein_coding	secretory carrier membrane protein 1
chr13	94389578	94401481	-	94389578	94422074	A5SS	0.33	50	50	ENSMUST00000152555.8	ENSMUSG00000021687.15	Scamp1	chr13	protein_coding	secretory carrier membrane protein 1
chr13	94679384;94680530	94680492;94684263	+	94679384	94684263	cassetteExon	0.5	100	100	ENSMUST00000022196.5	ENSMUSG00000021686.7	Ap3b1	chr13	protein_coding	adaptor-related protein complex 3, beta 1 subunit
chr13	94684401;94701708	94701673;94702113	+	94684401	94702113	cassetteExon	0.5	100	100	ENSMUST00000022196.5	ENSMUSG00000021686.7	Ap3b1	chr13	protein_coding	adaptor-related protein complex 3, beta 1 subunit
chr13	94678956	94679287	+	94668574	94679287	A5SS	0.5	50	50	ENSMUST00000022196.5	ENSMUSG00000021686.7	Ap3b1	chr13	protein_coding	adaptor-related protein complex 3, beta 1 subunit
chr13	94679391	94684263	+	94679384	94684263	A5SS	0.33	50	50	ENSMUST00000022196.5	ENSMUSG00000021686.7	Ap3b1	chr13	protein_coding	adaptor-related protein complex 3, beta 1 subunit
chr13	94679391	94684263	+	94680530	94684263	A5SS&ES	0.33	50	50	ENSMUST00000231916.2	ENSMUSG00000021686.7	Ap3b1	chr13	protein_coding	adaptor-related protein complex 3, beta 1 subunit
chr13	94679384	94684263	+	94679384	94680492	3pMXE	0.5	50	50	ENSMUST00000222383.2	ENSMUSG00000021686.7	Ap3b1	chr13	protein_coding	adaptor-related protein complex 3, beta 1 subunit
chr13	94925510;94951692	94951619;94968868	+	94925510	94968868	cassetteExon	0.5	100	100	ENSMUST00000046644.7	ENSMUSG00000042043.7	Tbca	chr13	protein_coding	tubulin cofactor A
chr13	94954294	94968868	+	94925510	94968868	A5SS	0.33	50	50	ENSMUST00000046644.7	ENSMUSG00000042043.7	Tbca	chr13	protein_coding	tubulin cofactor A
chr13	94954294	94968868	+	94951692	94968868	A5SS	0.33	50	50	ENSMUST00000220819.2	ENSMUSG00000042043.7	Tbca	chr13	protein_coding	tubulin cofactor A
chr13	95019332	95019598	+	95014030	95019598	A5SS	0.5	50	50	ENSMUST00000022195.13	ENSMUSG00000021685.13	Otp	chr13	protein_coding	orthopedia homeobox
chr13	95146903	95151539	+	95146903	95149081	3pMXE	0.25	50	50	ENSMUST00000160115.8	ENSMUSG00000042015.18	Wdr41	chr13	protein_coding	WD repeat domain 41
chr13	95136436;95139027	95138868;95142239	+	95136436	95142239	cassetteExon	0.5	100	100	ENSMUST00000160115.8	ENSMUSG00000042015.18	Wdr41	chr13	protein_coding	WD repeat domain 41
chr13	95113097	95114982	+	95113097	95114978	A3SS	0.5	50	50	ENSMUST00000160115.8	ENSMUSG00000042015.18	Wdr41	chr13	protein_coding	WD repeat domain 41
chr13	95146903	95149441	+	95146903	95149081	A3SS	0.25	50	50	ENSMUST00000160115.8	ENSMUSG00000042015.18	Wdr41	chr13	protein_coding	WD repeat domain 41
chr13	95146903	95149495	+	95146903	95149081	A3SS	0.25	50	50	ENSMUST00000160115.8	ENSMUSG00000042015.18	Wdr41	chr13	protein_coding	WD repeat domain 41
chr13	95133696	95136375	+	95136022	95136375	A5SS&ES	0.5	50	50	ENSMUST00000160115.8	ENSMUSG00000042015.18	Wdr41	chr13	protein_coding	WD repeat domain 41
chr13	95146903	95149441	+	95146903	95151539	A3SS	0.25	50	50	ENSMUST00000160801.8	ENSMUSG00000042015.18	Wdr41	chr13	protein_coding	WD repeat domain 41
chr13	95146903	95149495	+	95146903	95151539	A3SS	0.25	50	50	ENSMUST00000160801.8	ENSMUSG00000042015.18	Wdr41	chr13	protein_coding	WD repeat domain 41
chr13	95146903	95149495	+	95146903	95149441	A3SS	0.25	50	50	ENSMUST00000160409.2	ENSMUSG00000042015.18	Wdr41	chr13	protein_coding	WD repeat domain 41
chr13	95179980	95184245	-	95179980;95182994	95182830;95184245	ES	0.5	50	50	ENSMUST00000162412.8	ENSMUSG00000021684.18	Pde8b	chr13	protein_coding	phosphodiesterase 8B
chr13	95189438	95226786	-	95189438;95223376	95223236;95226786	ES	0.33	50	50	ENSMUST00000162412.8	ENSMUSG00000021684.18	Pde8b	chr13	protein_coding	phosphodiesterase 8B
chr13	95221769	95223236	-	95189438	95223236	A3SS	0.5	50	50	ENSMUST00000162412.8	ENSMUSG00000021684.18	Pde8b	chr13	protein_coding	phosphodiesterase 8B
chr13	95221769	95226786	-	95223376	95226786	A3SS&ES	0.33	50	50	ENSMUST00000162412.8	ENSMUSG00000021684.18	Pde8b	chr13	protein_coding	phosphodiesterase 8B
chr13	95259831	95386642	-	95259828	95386642	A3SS	0.5	50	50	ENSMUST00000162412.8	ENSMUSG00000021684.18	Pde8b	chr13	protein_coding	phosphodiesterase 8B
chr13	95162737	95164038	-	95162737	95164126	A5SS	0.5	50	50	ENSMUST00000162412.8	ENSMUSG00000021684.18	Pde8b	chr13	protein_coding	phosphodiesterase 8B
chr13	95179980	95182433	-	95179980	95182830	A5SS	0.33	50	50	ENSMUST00000162412.8	ENSMUSG00000021684.18	Pde8b	chr13	protein_coding	phosphodiesterase 8B
chr13	95189438	95219622	-	95189438	95223236	A5SS	0.33	50	50	ENSMUST00000162412.8	ENSMUSG00000021684.18	Pde8b	chr13	protein_coding	phosphodiesterase 8B
chr13	95244353	95358983	-	95244353	95259772	A5SS&ES	0.5	50	50	ENSMUST00000162412.8	ENSMUSG00000021684.18	Pde8b	chr13	protein_coding	phosphodiesterase 8B
chr13	95259828	95386758	-	95259828	95386642	A5SS	0.5	50	50	ENSMUST00000162412.8	ENSMUSG00000021684.18	Pde8b	chr13	protein_coding	phosphodiesterase 8B
chr13	95244353	95358983	-	95244353;95259831	95259772;95358983	ES	0.5	50	50	ENSMUST00000162292.8	ENSMUSG00000021684.18	Pde8b	chr13	protein_coding	phosphodiesterase 8B
chr13	95259831	95386642	-	95259831	95358983	5pMXE	0.33	50	50	ENSMUST00000162292.8	ENSMUSG00000021684.18	Pde8b	chr13	protein_coding	phosphodiesterase 8B
chr13	95221769	95226786	-	95189438	95226786	A3SS	0.33	50	50	ENSMUST00000162292.8	ENSMUSG00000021684.18	Pde8b	chr13	protein_coding	phosphodiesterase 8B
chr13	95189438	95219622	-	95189438	95226786	A5SS	0.33	50	50	ENSMUST00000162292.8	ENSMUSG00000021684.18	Pde8b	chr13	protein_coding	phosphodiesterase 8B
chr13	95259831	95322563	-	95259831	95358983	A5SS	0.33	50	50	ENSMUST00000162292.8	ENSMUSG00000021684.18	Pde8b	chr13	protein_coding	phosphodiesterase 8B
chr13	95179980	95184245	-	95179980	95182433	5pMXE	0.33	50	50	ENSMUST00000162882.2	ENSMUSG00000021684.18	Pde8b	chr13	protein_coding	phosphodiesterase 8B
chr13	95221769	95226786	-	95221769;95223376	95223236;95226786	ES	0.33	50	50	ENSMUST00000162153.9	ENSMUSG00000021684.18	Pde8b	chr13	protein_coding	phosphodiesterase 8B
chr13	95189438;95223376	95223236;95226786	-	95189438;95221769	95219622;95226786	MXE	0.5	100	100	ENSMUST00000022192.12	ENSMUSG00000021684.18	Pde8b	chr13	protein_coding	phosphodiesterase 8B
chr13	95259831	95322563	-	95259831	95386642	A5SS	0.33	50	50	ENSMUST00000160957.9	ENSMUSG00000021684.18	Pde8b	chr13	protein_coding	phosphodiesterase 8B
chr13	95461852	95472564	+	95460278	95472564	A5SS	0.33	50	50	ENSMUST00000221807.2	ENSMUSG00000041995.9	Zbed3	chr13	protein_coding	zinc finger, BED type containing 3
chr13	95463452	95472564	+	95460278	95472564	A5SS	0.33	50	50	ENSMUST00000221807.2	ENSMUSG00000041995.9	Zbed3	chr13	protein_coding	zinc finger, BED type containing 3
chr13	95463452	95472564	+	95461852	95472564	A5SS	0.33	50	50	ENSMUST00000045909.8	ENSMUSG00000041995.9	Zbed3	chr13	protein_coding	zinc finger, BED type containing 3
chr13	95580798	95581108	-	95580777	95581108	A3SS	0.5	50	50	ENSMUST00000221025.2	ENSMUSG00000021680.9	Crhbp	chr13	protein_coding	corticotropin releasing hormone binding protein
chr13	95796858	95798095	-	95796858;95797591	95797507;95798095	ES	0.5	50	50	ENSMUST00000068603.8	ENSMUSG00000021676.11	Iqgap2	chr13	protein_coding	IQ motif containing GTPase activating protein 2
chr13	95974431	96028947	-	95974431	96028172	5pMXE	0.5	50	50	ENSMUST00000068603.8	ENSMUSG00000021676.11	Iqgap2	chr13	protein_coding	IQ motif containing GTPase activating protein 2
chr13	95795430	95796626	-	95794443	95796626	A3SS	0.5	50	50	ENSMUST00000068603.8	ENSMUSG00000021676.11	Iqgap2	chr13	protein_coding	IQ motif containing GTPase activating protein 2
chr13	95899910	95900666	-	95899910	95974332	A5SS	0.5	50	50	ENSMUST00000068603.8	ENSMUSG00000021676.11	Iqgap2	chr13	protein_coding	IQ motif containing GTPase activating protein 2
chr13	95796858	95798095	-	95796858	95797507	5pMXE	0.5	50	50	ENSMUST00000238404.2	ENSMUSG00000021676.11	Iqgap2	chr13	protein_coding	IQ motif containing GTPase activating protein 2
chr13	96118510	96121287	-	96118510	96122438	A5SS	0.5	50	50	ENSMUST00000161263.8	ENSMUSG00000051111.17	Sv2c	chr13	protein_coding	synaptic vesicle glycoprotein 2c
chr13	96529852	96533148	+	96529852;96531077	96531000;96533148	ES	0.5	50	50	ENSMUST00000099295.6	ENSMUSG00000021671.10	Poc5	chr13	protein_coding	POC5 centriolar protein
chr13	96541191;96546818	96546599;96547098	+	96541191	96547098	cassetteExon	0.5	100	100	ENSMUST00000099295.6	ENSMUSG00000021671.10	Poc5	chr13	protein_coding	POC5 centriolar protein
chr13	96554408	96557228	-	96554408;96556304	96556173;96557228	ES	0.5	50	50	ENSMUST00000181276.8	ENSMUSG00000047117.14	Ankdd1b	chr13	protein_coding	ankyrin repeat and death domain containing 1B
chr13	96572479	96578065	-	96572479	96573074	5pMXE	0.25	50	50	ENSMUST00000181276.8	ENSMUSG00000047117.14	Ankdd1b	chr13	protein_coding	ankyrin repeat and death domain containing 1B
chr13	96572479	96580787	-	96572479	96573074	5pMXE	0.25	50	50	ENSMUST00000181276.8	ENSMUSG00000047117.14	Ankdd1b	chr13	protein_coding	ankyrin repeat and death domain containing 1B
chr13	96572479	96607448	-	96572479	96573074	5pMXE	0.25	50	50	ENSMUST00000181276.8	ENSMUSG00000047117.14	Ankdd1b	chr13	protein_coding	ankyrin repeat and death domain containing 1B
chr13	96572479	96580787	-	96572479;96578163	96578065;96580787	ES	0.5	50	50	ENSMUST00000239137.2	ENSMUSG00000047117.14	Ankdd1b	chr13	protein_coding	ankyrin repeat and death domain containing 1B
chr13	96591389;96601905	96601802;96607448	-	96591389;96597421	96597323;96607448	MXE	0.5	100	100	ENSMUST00000239137.2	ENSMUSG00000047117.14	Ankdd1b	chr13	protein_coding	ankyrin repeat and death domain containing 1B
chr13	96597421;96601905	96601802;96607448	-	96597421	96607448	cassetteExon	0.5	100	100	ENSMUST00000239137.2	ENSMUSG00000047117.14	Ankdd1b	chr13	protein_coding	ankyrin repeat and death domain containing 1B
chr13	96591389	96601802	-	96591389;96597421	96597323;96601802	ES	0.5	50	50	ENSMUST00000055607.13	ENSMUSG00000047117.14	Ankdd1b	chr13	protein_coding	ankyrin repeat and death domain containing 1B
chr13	96566392	96569810	-	96554408	96569810	A3SS	0.5	50	50	ENSMUST00000181761.2	ENSMUSG00000047117.14	Ankdd1b	chr13	protein_coding	ankyrin repeat and death domain containing 1B
chr13	96554408	96556173	-	96554408	96569810	A5SS	0.33	50	50	ENSMUST00000181761.2	ENSMUSG00000047117.14	Ankdd1b	chr13	protein_coding	ankyrin repeat and death domain containing 1B
chr13	96554408	96557228	-	96554408	96569810	A5SS	0.33	50	50	ENSMUST00000181761.2	ENSMUSG00000047117.14	Ankdd1b	chr13	protein_coding	ankyrin repeat and death domain containing 1B
chr13	96597421	96607448	-	96572479	96607448	A3SS	0.33	50	50	ENSMUST00000238922.2	ENSMUSG00000047117.14	Ankdd1b	chr13	protein_coding	ankyrin repeat and death domain containing 1B
chr13	96601905	96607448	-	96572479	96607448	A3SS	0.33	50	50	ENSMUST00000238922.2	ENSMUSG00000047117.14	Ankdd1b	chr13	protein_coding	ankyrin repeat and death domain containing 1B
chr13	96572479	96578065	-	96572479	96607448	A5SS	0.25	50	50	ENSMUST00000238922.2	ENSMUSG00000047117.14	Ankdd1b	chr13	protein_coding	ankyrin repeat and death domain containing 1B
chr13	96572479	96580787	-	96572479	96607448	A5SS	0.25	50	50	ENSMUST00000238922.2	ENSMUSG00000047117.14	Ankdd1b	chr13	protein_coding	ankyrin repeat and death domain containing 1B
chr13	96618999	96623316	-	96618999;96620913	96619999;96623316	ES	0.5	50	50	ENSMUST00000022172.12	ENSMUSG00000021668.16	Polk	chr13	protein_coding	polymerase (DNA directed), kappa
chr13	96632040	96638027	-	96632040;96633350	96633111;96638027	ES	0.25	50	50	ENSMUST00000022172.12	ENSMUSG00000021668.16	Polk	chr13	protein_coding	polymerase (DNA directed), kappa
chr13	96632040;96633063	96633001;96638027	-	96632040;96633350	96633111;96638027	MXE	0.5	100	100	ENSMUST00000022172.12	ENSMUSG00000021668.16	Polk	chr13	protein_coding	polymerase (DNA directed), kappa
chr13	96620913	96623353	-	96620913	96623316	A5SS	0.5	50	50	ENSMUST00000022172.12	ENSMUSG00000021668.16	Polk	chr13	protein_coding	polymerase (DNA directed), kappa
chr13	96655695	96678734	-	96655695	96678835	A5SS	0.5	50	50	ENSMUST00000022172.12	ENSMUSG00000021668.16	Polk	chr13	protein_coding	polymerase (DNA directed), kappa
chr13	96632040	96638027	-	96632040;96633063	96633001;96638027	ES	0.25	50	50	ENSMUST00000091387.4	ENSMUSG00000021668.16	Polk	chr13	protein_coding	polymerase (DNA directed), kappa
chr13	96632040;96633350	96633001;96638027	-	96632040	96638027	cassetteExon	0.5	100	100	ENSMUST00000221899.2	ENSMUSG00000021668.16	Polk	chr13	protein_coding	polymerase (DNA directed), kappa
chr13	96625786;96627477	96627445;96638027	-	96625786;96632040	96631916;96638027	MXE	0.5	100	100	ENSMUST00000222143.2	ENSMUSG00000021668.16	Polk	chr13	protein_coding	polymerase (DNA directed), kappa
chr13	96630503	96631916	-	96625786	96631916	A3SS	0.5	50	50	ENSMUST00000222143.2	ENSMUSG00000021668.16	Polk	chr13	protein_coding	polymerase (DNA directed), kappa
chr13	96633063	96638027	-	96627477	96638027	A3SS	0.25	50	50	ENSMUST00000222075.2	ENSMUSG00000021668.16	Polk	chr13	protein_coding	polymerase (DNA directed), kappa
chr13	96633350	96638027	-	96627477	96638027	A3SS	0.25	50	50	ENSMUST00000222075.2	ENSMUSG00000021668.16	Polk	chr13	protein_coding	polymerase (DNA directed), kappa
chr13	96627477	96630337	-	96627477	96638027	A5SS	0.5	50	50	ENSMUST00000222075.2	ENSMUSG00000021668.16	Polk	chr13	protein_coding	polymerase (DNA directed), kappa
chr13	96620913	96623316	-	96618999	96623316	A3SS	0.5	50	50	ENSMUST00000221645.2	ENSMUSG00000021668.16	Polk	chr13	protein_coding	polymerase (DNA directed), kappa
chr13	96618999	96619999	-	96618999	96623316	A5SS	0.5	50	50	ENSMUST00000221645.2	ENSMUSG00000021668.16	Polk	chr13	protein_coding	polymerase (DNA directed), kappa
chr13	96753057;96753579	96753502;96761203	+	96753057	96761203	cassetteExon	0.5	100	100	ENSMUST00000179226.8	ENSMUSG00000021669.16	Cert1	chr13	protein_coding	ceramide transporter 1
chr13	96765607	96767269	+	96765653	96767269	A5SS	0.5	50	50	ENSMUST00000179226.8	ENSMUSG00000021669.16	Cert1	chr13	protein_coding	ceramide transporter 1
chr13	96787672	96788604	-	96787672;96788522	96788364;96788604	ES	0.5	50	50	ENSMUST00000022176.15	ENSMUSG00000021670.15	Hmgcr	chr13	protein_coding	3-hydroxy-3-methylglutaryl-Coenzyme A reductase
chr13	96792215	96793071	-	96792215;96792520	96792362;96793071	ES	0.5	50	50	ENSMUST00000022176.15	ENSMUSG00000021670.15	Hmgcr	chr13	protein_coding	3-hydroxy-3-methylglutaryl-Coenzyme A reductase
chr13	96789336	96803079	-	96789336	96791324	A5SS&ES	0.5	50	50	ENSMUST00000022176.15	ENSMUSG00000021670.15	Hmgcr	chr13	protein_coding	3-hydroxy-3-methylglutaryl-Coenzyme A reductase
chr13	96803216	96805661	-	96803216	96807319	A5SS	0.25	50	50	ENSMUST00000022176.15	ENSMUSG00000021670.15	Hmgcr	chr13	protein_coding	3-hydroxy-3-methylglutaryl-Coenzyme A reductase
chr13	96803216	96806909	-	96803216	96807319	A5SS	0.25	50	50	ENSMUST00000022176.15	ENSMUSG00000021670.15	Hmgcr	chr13	protein_coding	3-hydroxy-3-methylglutaryl-Coenzyme A reductase
chr13	96803216	96806956	-	96803216	96807319	A5SS	0.25	50	50	ENSMUST00000022176.15	ENSMUSG00000021670.15	Hmgcr	chr13	protein_coding	3-hydroxy-3-methylglutaryl-Coenzyme A reductase
chr13	96787672	96788604	-	96788522	96788604	3pMXE	0.5	50	50	ENSMUST00000170287.8	ENSMUSG00000021670.15	Hmgcr	chr13	protein_coding	3-hydroxy-3-methylglutaryl-Coenzyme A reductase
chr13	96803216	96805661	-	96803216	96806956	A5SS	0.25	50	50	ENSMUST00000169196.8	ENSMUSG00000021670.15	Hmgcr	chr13	protein_coding	3-hydroxy-3-methylglutaryl-Coenzyme A reductase
chr13	96803216	96806909	-	96803216	96806956	A5SS	0.25	50	50	ENSMUST00000169196.8	ENSMUSG00000021670.15	Hmgcr	chr13	protein_coding	3-hydroxy-3-methylglutaryl-Coenzyme A reductase
chr13	96803216	96806909	-	96803216	96805661	5pMXE	0.25	50	50	ENSMUST00000169966.2	ENSMUSG00000021670.15	Hmgcr	chr13	protein_coding	3-hydroxy-3-methylglutaryl-Coenzyme A reductase
chr13	96928252	96935236	+	96928252;96932807	96932247;96935236	ES	0.5	50	50	ENSMUST00000208758.2	ENSMUSG00000109561.2	Ankrd31	chr13	protein_coding	ankyrin repeat domain 31
chr13	97029607	97045992	+	97029607;97040638	97040539;97045992	ES	0.5	50	50	ENSMUST00000208758.2	ENSMUSG00000109561.2	Ankrd31	chr13	protein_coding	ankyrin repeat domain 31
chr13	96935972;96940771	96940616;96957822	+	96935972	96957822	cassetteExon	0.5	100	100	ENSMUST00000208758.2	ENSMUSG00000109561.2	Ankrd31	chr13	protein_coding	ankyrin repeat domain 31
chr13	96889588	96935119	+	96889588	96910845	A3SS&ES	0.5	50	50	ENSMUST00000208758.2	ENSMUSG00000109561.2	Ankrd31	chr13	protein_coding	ankyrin repeat domain 31
chr13	96923179	96928209	+	96916893	96928209	A5SS	0.5	50	50	ENSMUST00000208758.2	ENSMUSG00000109561.2	Ankrd31	chr13	protein_coding	ankyrin repeat domain 31
chr13	96928252	96932247	+	96928252	96935236	A3SS	0.5	50	50	ENSMUST00000208004.2	ENSMUSG00000109561.2	Ankrd31	chr13	protein_coding	ankyrin repeat domain 31
chr13	96932807	96935236	+	96928252	96935236	A5SS	0.5	50	50	ENSMUST00000208004.2	ENSMUSG00000109561.2	Ankrd31	chr13	protein_coding	ankyrin repeat domain 31
chr13	97159108	97166709	-	97159096	97166709	A3SS	0.5	50	50	ENSMUST00000091377.5	ENSMUSG00000052075.8	1700029F12Rik	chr13	protein_coding	RIKEN cDNA 1700029F12 gene
chr13	97208219	97228326	+	97203830	97228326	A5SS	0.5	50	50	ENSMUST00000169863.9	ENSMUSG00000041817.15	Fam169a	chr13	protein_coding	family with sequence similarity 169, member A
chr13	97268462	97270047	-	97268543	97270047	A3SS	0.5	50	50	ENSMUST00000073456.9	ENSMUSG00000060739.9	Nsa2	chr13	protein_coding	NSA2 ribosome biogenesis homolog
chr13	97279600	97282161	+	97279600	97282155	A3SS	0.5	50	50	ENSMUST00000160139.8	ENSMUSG00000021666.17	Gfm2	chr13	protein_coding	G elongation factor, mitochondrial 2
chr13	97274567	97278435	+	97274534	97278435	A5SS	0.33	50	50	ENSMUST00000160139.8	ENSMUSG00000021666.17	Gfm2	chr13	protein_coding	G elongation factor, mitochondrial 2
chr13	97274908	97278435	+	97274534	97278435	A5SS	0.33	50	50	ENSMUST00000160139.8	ENSMUSG00000021666.17	Gfm2	chr13	protein_coding	G elongation factor, mitochondrial 2
chr13	97286921	97289736	+	97286927	97289736	A5SS	0.33	50	50	ENSMUST00000160139.8	ENSMUSG00000021666.17	Gfm2	chr13	protein_coding	G elongation factor, mitochondrial 2
chr13	97288232	97289736	+	97286927	97289736	A5SS	0.33	50	50	ENSMUST00000160139.8	ENSMUSG00000021666.17	Gfm2	chr13	protein_coding	G elongation factor, mitochondrial 2
chr13	97311552	97315536	+	97311552	97312108	3pMXE	0.5	50	50	ENSMUST00000042084.13	ENSMUSG00000021666.17	Gfm2	chr13	protein_coding	G elongation factor, mitochondrial 2
chr13	97286921;97288232	97288143;97289736	+	97286921	97289736	cassetteExon	0.5	100	100	ENSMUST00000042084.13	ENSMUSG00000021666.17	Gfm2	chr13	protein_coding	G elongation factor, mitochondrial 2
chr13	97292108;97296675	97296595;97297527	+	97292108	97297527	cassetteExon	0.5	100	100	ENSMUST00000042084.13	ENSMUSG00000021666.17	Gfm2	chr13	protein_coding	G elongation factor, mitochondrial 2
chr13	97274908	97278435	+	97274567	97278435	A5SS	0.33	50	50	ENSMUST00000161843.8	ENSMUSG00000021666.17	Gfm2	chr13	protein_coding	G elongation factor, mitochondrial 2
chr13	97327786	97334534	-	97327786;97330775	97330630;97334534	ES	0.5	50	50	ENSMUST00000022169.10	ENSMUSG00000021665.10	Hexb	chr13	protein_coding	hexosaminidase B
chr13	97619540	97630913	+	97571600	97630913	A5SS	0.5	50	50	ENSMUST00000109431.10	ENSMUSG00000078952.10	Lncenc1	chr13	lncRNA	long non-coding RNA, embryonic stem cells expressed 1
chr13	97619540	97625687	+	97619540	97630913	A3SS	0.5	50	50	ENSMUST00000179324.2	ENSMUSG00000078952.10	Lncenc1	chr13	lncRNA	long non-coding RNA, embryonic stem cells expressed 1
chr13	97700493	97713098	+	97700493	97719824	A3SS	0.33	50	50	ENSMUST00000210827.2	ENSMUSG00000110235.2	Gm5086	chr13	lncRNA	predicted gene 5086
chr13	97700493	97719539	+	97700493	97719824	A3SS	0.33	50	50	ENSMUST00000210827.2	ENSMUSG00000110235.2	Gm5086	chr13	lncRNA	predicted gene 5086
chr13	97700493	97713098	+	97700493	97719539	A3SS	0.33	50	50	ENSMUST00000210022.2	ENSMUSG00000110235.2	Gm5086	chr13	lncRNA	predicted gene 5086
chr13	97872183	97879212	-	97872183;97872900	97872755;97879212	ES	0.5	50	50	ENSMUST00000144993.2	ENSMUSG00000054944.8	5330416C01Rik	chr13	lncRNA	RIKEN cDNA 5330416C01 gene
chr13	98073369	98078961	-	98073369;98076068	98075968;98078961	ES	0.5	50	50	ENSMUST00000238746.2	ENSMUSG00000021662.12	Arhgef28	chr13	protein_coding	Rho guanine nucleotide exchange factor (GEF) 28
chr13	98133441	98165885	-	98133441	98152523	5pMXE	0.5	50	50	ENSMUST00000238746.2	ENSMUSG00000021662.12	Arhgef28	chr13	protein_coding	Rho guanine nucleotide exchange factor (GEF) 28
chr13	98282103	98342832	-	98282103	98342581	5pMXE	0.25	50	50	ENSMUST00000109426.3	ENSMUSG00000021662.12	Arhgef28	chr13	protein_coding	Rho guanine nucleotide exchange factor (GEF) 28
chr13	98166439	98169018	-	98166439	98180308	A5SS	0.5	50	50	ENSMUST00000109426.3	ENSMUSG00000021662.12	Arhgef28	chr13	protein_coding	Rho guanine nucleotide exchange factor (GEF) 28
chr13	98282103	98312337	-	98282103	98342581	A5SS	0.25	50	50	ENSMUST00000109426.3	ENSMUSG00000021662.12	Arhgef28	chr13	protein_coding	Rho guanine nucleotide exchange factor (GEF) 28
chr13	98282103	98312935	-	98282103	98342581	A5SS	0.25	50	50	ENSMUST00000109426.3	ENSMUSG00000021662.12	Arhgef28	chr13	protein_coding	Rho guanine nucleotide exchange factor (GEF) 28
chr13	98282103	98312337	-	98282103	98342832	A5SS	0.25	50	50	ENSMUST00000225884.2	ENSMUSG00000021662.12	Arhgef28	chr13	protein_coding	Rho guanine nucleotide exchange factor (GEF) 28
chr13	98282103	98312935	-	98282103	98342832	A5SS	0.25	50	50	ENSMUST00000225884.2	ENSMUSG00000021662.12	Arhgef28	chr13	protein_coding	Rho guanine nucleotide exchange factor (GEF) 28
chr13	98282103	98312337	-	98282103	98312935	A5SS	0.25	50	50	ENSMUST00000223849.2	ENSMUSG00000021662.12	Arhgef28	chr13	protein_coding	Rho guanine nucleotide exchange factor (GEF) 28
chr13	98399984	98403824	+	98399984;98403040	98402659;98403824	ES	0.5	50	50	ENSMUST00000150352.3	ENSMUSG00000021661.17	Ankra2	chr13	protein_coding	ankyrin repeat, family A (RFXANK-like), 2
chr13	98409360	98409886	+	98409360	98410428	A3SS	0.33	50	50	ENSMUST00000150352.3	ENSMUSG00000021661.17	Ankra2	chr13	protein_coding	ankyrin repeat, family A (RFXANK-like), 2
chr13	98409360	98410315	+	98409360	98410428	A3SS	0.33	50	50	ENSMUST00000150352.3	ENSMUSG00000021661.17	Ankra2	chr13	protein_coding	ankyrin repeat, family A (RFXANK-like), 2
chr13	98409360	98410315	+	98409360	98409886	A3SS	0.33	50	50	ENSMUST00000226100.2	ENSMUSG00000021661.17	Ankra2	chr13	protein_coding	ankyrin repeat, family A (RFXANK-like), 2
chr13	98399984	98403824	+	98399984	98402659	A3SS	0.5	50	50	ENSMUST00000223606.2	ENSMUSG00000021661.17	Ankra2	chr13	protein_coding	ankyrin repeat, family A (RFXANK-like), 2
chr13	98416486	98423766	+	98416486;98420082	98419997;98423766	ES	0.5	50	50	ENSMUST00000180066.9	ENSMUSG00000096330.9	Gm21976	chr13	protein_coding	predicted gene 21976
chr13	98423829	98429752	+	98423829	98439013	A3SS	0.5	50	50	ENSMUST00000180066.9	ENSMUSG00000096330.9	Gm21976	chr13	protein_coding	predicted gene 21976
chr13	98452806	98453374	-	98452806	98453133	A5SS	0.5	50	50	ENSMUST00000022163.15	ENSMUSG00000021660.15	Btf3	chr13	protein_coding	basic transcription factor 3
chr13	98829225	98830855	-	98829225	98831314	A5SS	0.5	50	50	ENSMUST00000064347.8	ENSMUSG00000052485.8	Tmem171	chr13	protein_coding	transmembrane protein 171
chr13	98892133	98899340	-	98892133;98892360	98892249;98899340	ES	0.5	50	50	ENSMUST00000099277.12	ENSMUSG00000041685.17	Fcho2	chr13	protein_coding	FCH domain only 2
chr13	98926381	98942814	-	98926381;98932875	98932801;98942814	ES	0.5	50	50	ENSMUST00000099277.12	ENSMUSG00000041685.17	Fcho2	chr13	protein_coding	FCH domain only 2
chr13	98888439;98888542	98888531;98891588	-	98888439;98888853	98888842;98891588	MXE	0.5	100	100	ENSMUST00000099277.12	ENSMUSG00000041685.17	Fcho2	chr13	protein_coding	FCH domain only 2
chr13	98890356	98891588	-	98888853	98891588	A3SS	0.25	50	50	ENSMUST00000099277.12	ENSMUSG00000041685.17	Fcho2	chr13	protein_coding	FCH domain only 2
chr13	98890605	98891588	-	98888853	98891588	A3SS	0.25	50	50	ENSMUST00000099277.12	ENSMUSG00000041685.17	Fcho2	chr13	protein_coding	FCH domain only 2
chr13	98890356	98891588	-	98888542	98891588	A3SS	0.25	50	50	ENSMUST00000179563.8	ENSMUSG00000041685.17	Fcho2	chr13	protein_coding	FCH domain only 2
chr13	98890605	98891588	-	98888542	98891588	A3SS	0.25	50	50	ENSMUST00000179563.8	ENSMUSG00000041685.17	Fcho2	chr13	protein_coding	FCH domain only 2
chr13	98890356	98891588	-	98890605	98891588	A3SS	0.25	50	50	ENSMUST00000224992.2	ENSMUSG00000041685.17	Fcho2	chr13	protein_coding	FCH domain only 2
chr13	99027298	99062759	-	99027298	99027423	5pMXE	0.25	50	50	ENSMUST00000109399.9	ENSMUSG00000009470.18	Tnpo1	chr13	protein_coding	transportin 1
chr13	99027298	99027435	-	99027298	99027423	A5SS	0.25	50	50	ENSMUST00000109399.9	ENSMUSG00000009470.18	Tnpo1	chr13	protein_coding	transportin 1
chr13	99027298	99027452	-	99027298	99027423	A5SS	0.25	50	50	ENSMUST00000109399.9	ENSMUSG00000009470.18	Tnpo1	chr13	protein_coding	transportin 1
chr13	99027298	99027435	-	99027298	99062759	A5SS	0.25	50	50	ENSMUST00000109401.8	ENSMUSG00000009470.18	Tnpo1	chr13	protein_coding	transportin 1
chr13	99027298	99027452	-	99027298	99062759	A5SS	0.25	50	50	ENSMUST00000109401.8	ENSMUSG00000009470.18	Tnpo1	chr13	protein_coding	transportin 1
chr13	99027298	99027452	-	99027298	99027435	A5SS	0.25	50	50	ENSMUST00000179301.8	ENSMUSG00000009470.18	Tnpo1	chr13	protein_coding	transportin 1
chr13	99237333;99239320	99239173;99242486	+	99237333	99242486	cassetteExon	0.5	100	100	ENSMUST00000181742.2	ENSMUSG00000097848.3	Gm807	chr13	lncRNA	predicted gene 807
chr13	99536884;99537900	99537778;99540012	+	99536884	99540012	cassetteExon	0.5	100	100	ENSMUST00000052249.7	ENSMUSG00000041632.8	Mrps27	chr13	protein_coding	mitochondrial ribosomal protein S27
chr13	99482172	99484840	+	99481383	99484840	A5SS	0.5	50	50	ENSMUST00000052249.7	ENSMUSG00000041632.8	Mrps27	chr13	protein_coding	mitochondrial ribosomal protein S27
chr13	99548079	99548350	-	99537866	99548350	A3SS	0.5	50	50	ENSMUST00000180491.2	ENSMUSG00000097828.3	6430562O15Rik	chr13	lncRNA	RIKEN cDNA 6430562O15 gene
chr13	99578282	99580236	-	99578282	99580722	A5SS	0.5	50	50	ENSMUST00000064762.6	ENSMUSG00000052727.7	Map1b	chr13	protein_coding	microtubule-associated protein 1B
chr13	99580804	99583684	-	99580804	99644616	A5SS	0.33	50	50	ENSMUST00000064762.6	ENSMUSG00000052727.7	Map1b	chr13	protein_coding	microtubule-associated protein 1B
chr13	99580804	99613432	-	99580804	99644616	A5SS	0.33	50	50	ENSMUST00000064762.6	ENSMUSG00000052727.7	Map1b	chr13	protein_coding	microtubule-associated protein 1B
chr13	99580804	99613432	-	99580804	99583684	5pMXE	0.33	50	50	ENSMUST00000223725.2	ENSMUSG00000052727.7	Map1b	chr13	protein_coding	microtubule-associated protein 1B
chr13	100036548	100036984	-	100036587	100036984	A3SS	0.5	50	50	ENSMUST00000022150.8	ENSMUSG00000021647.8	Cartpt	chr13	protein_coding	CART prepropeptide
chr13	100091279;100095379	100095313;100097408	-	100091279	100097408	cassetteExon	0.5	100	100	ENSMUST00000221034.2	ENSMUSG00000021646.10	Mccc2	chr13	protein_coding	methylcrotonoyl-Coenzyme A carboxylase 2 (beta)
chr13	100100388;100104244	100104149;100104342	-	100100388	100104342	cassetteExon	0.5	100	100	ENSMUST00000222083.2	ENSMUSG00000021646.10	Mccc2	chr13	protein_coding	methylcrotonoyl-Coenzyme A carboxylase 2 (beta)
chr13	100136824;100138947	100138795;100151894	-	100136824	100151894	cassetteExon	0.5	100	100	ENSMUST00000022148.7	ENSMUSG00000021646.10	Mccc2	chr13	protein_coding	methylcrotonoyl-Coenzyme A carboxylase 2 (beta)
chr13	100146248	100151894	-	100136824	100151894	A3SS	0.33	50	50	ENSMUST00000022148.7	ENSMUSG00000021646.10	Mccc2	chr13	protein_coding	methylcrotonoyl-Coenzyme A carboxylase 2 (beta)
chr13	100108351	100111781	-	100108351	100112917	A5SS	0.5	50	50	ENSMUST00000022148.7	ENSMUSG00000021646.10	Mccc2	chr13	protein_coding	methylcrotonoyl-Coenzyme A carboxylase 2 (beta)
chr13	100091279	100097408	-	100095379	100097408	3pMXE	0.5	50	50	ENSMUST00000223013.2	ENSMUSG00000021646.10	Mccc2	chr13	protein_coding	methylcrotonoyl-Coenzyme A carboxylase 2 (beta)
chr13	100138947;100146248	100146158;100151894	-	100138947	100151894	cassetteExon	0.5	100	100	ENSMUST00000221344.2	ENSMUSG00000021646.10	Mccc2	chr13	protein_coding	methylcrotonoyl-Coenzyme A carboxylase 2 (beta)
chr13	100215305	100220649	-	100215307	100220649	A3SS	0.5	50	50	ENSMUST00000038104.12	ENSMUSG00000049658.14	Bdp1	chr13	protein_coding	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
chr13	100230050	100234046	-	100230053	100234046	A3SS	0.5	50	50	ENSMUST00000038104.12	ENSMUSG00000049658.14	Bdp1	chr13	protein_coding	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
chr13	100235670	100240135	-	100235737	100240135	A3SS	0.5	50	50	ENSMUST00000038104.12	ENSMUSG00000049658.14	Bdp1	chr13	protein_coding	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
chr13	100183347	100186368	-	100183347	100186144	A5SS	0.5	50	50	ENSMUST00000038104.12	ENSMUSG00000049658.14	Bdp1	chr13	protein_coding	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
chr13	100245639	100247256	+	100245639	100250473	A3SS	0.5	50	50	ENSMUST00000022145.15	ENSMUSG00000021643.16	Serf1	chr13	protein_coding	small EDRK-rich factor 1
chr13	100244992	100245531	+	100244737	100245531	A5SS	0.33	50	50	ENSMUST00000022145.15	ENSMUSG00000021643.16	Serf1	chr13	protein_coding	small EDRK-rich factor 1
chr13	100245035	100245531	+	100244737	100245531	A5SS	0.33	50	50	ENSMUST00000022145.15	ENSMUSG00000021643.16	Serf1	chr13	protein_coding	small EDRK-rich factor 1
chr13	100244992	100245531	+	100245035	100245531	A5SS	0.33	50	50	ENSMUST00000151821.8	ENSMUSG00000021643.16	Serf1	chr13	protein_coding	small EDRK-rich factor 1
chr13	100261473;100262439	100262327;100263095	+	100261473	100263095	cassetteExon	0.5	100	100	ENSMUST00000022147.15	ENSMUSG00000021645.17	Smn1	chr13	protein_coding	survival motor neuron 1
chr13	100272247	100273895	+	100272247	100273889	A3SS	0.5	50	50	ENSMUST00000022147.15	ENSMUSG00000021645.17	Smn1	chr13	protein_coding	survival motor neuron 1
chr13	100261473	100262327	+	100261473	100272197	A3SS	0.25	50	50	ENSMUST00000091321.6	ENSMUSG00000021645.17	Smn1	chr13	protein_coding	survival motor neuron 1
chr13	100261473	100263095	+	100261473	100272197	A3SS	0.25	50	50	ENSMUST00000091321.6	ENSMUSG00000021645.17	Smn1	chr13	protein_coding	survival motor neuron 1
chr13	100261473	100264313	+	100261473	100272197	A3SS	0.25	50	50	ENSMUST00000091321.6	ENSMUSG00000021645.17	Smn1	chr13	protein_coding	survival motor neuron 1
chr13	100268974	100272197	+	100261473	100272197	A5SS	0.5	50	50	ENSMUST00000091321.6	ENSMUSG00000021645.17	Smn1	chr13	protein_coding	survival motor neuron 1
chr13	100261473;100263497	100263095;100264313	+	100261473	100264313	cassetteExon	0.5	100	100	ENSMUST00000143937.2	ENSMUSG00000021645.17	Smn1	chr13	protein_coding	survival motor neuron 1
chr13	100261473	100262327	+	100261473	100264313	A3SS	0.33	50	50	ENSMUST00000143937.2	ENSMUSG00000021645.17	Smn1	chr13	protein_coding	survival motor neuron 1
chr13	100289154	100296629	-	100289154;100291530	100291363;100296629	ES	0.5	50	50	ENSMUST00000067975.12	ENSMUSG00000078945.11	Naip2	chr13	protein_coding	NLR family, apoptosis inhibitory protein 2
chr13	100563270	100564465	-	100564001	100564465	A3SS	0.5	50	50	ENSMUST00000022142.7	ENSMUSG00000021640.7	Naip1	chr13	protein_coding	NLR family, apoptosis inhibitory protein 1
chr13	100564001	100564469	-	100564001	100564465	A5SS	0.5	50	50	ENSMUST00000022142.7	ENSMUSG00000021640.7	Naip1	chr13	protein_coding	NLR family, apoptosis inhibitory protein 1
chr13	100596928	100605423	-	100596928;100598470	100598356;100605423	ES	0.5	50	50	ENSMUST00000145266.8	ENSMUSG00000021639.18	Gtf2h2	chr13	protein_coding	general transcription factor II H, polypeptide 2
chr13	100617155	100617720	-	100617155;100617599	100617512;100617720	ES	0.5	50	50	ENSMUST00000145266.8	ENSMUSG00000021639.18	Gtf2h2	chr13	protein_coding	general transcription factor II H, polypeptide 2
chr13	100617810	100622579	-	100617810;100619551	100619446;100622579	ES	0.5	50	50	ENSMUST00000145266.8	ENSMUSG00000021639.18	Gtf2h2	chr13	protein_coding	general transcription factor II H, polypeptide 2
chr13	100626672	100628965	-	100626672	100628751	5pMXE	0.5	50	50	ENSMUST00000145266.8	ENSMUSG00000021639.18	Gtf2h2	chr13	protein_coding	general transcription factor II H, polypeptide 2
chr13	100618475	100619446	-	100617810	100619446	A3SS	0.5	50	50	ENSMUST00000145266.8	ENSMUSG00000021639.18	Gtf2h2	chr13	protein_coding	general transcription factor II H, polypeptide 2
chr13	100598470	100600025	-	100598470	100605423	A5SS	0.5	50	50	ENSMUST00000145266.8	ENSMUSG00000021639.18	Gtf2h2	chr13	protein_coding	general transcription factor II H, polypeptide 2
chr13	100596928	100605423	-	100596928	100598356	5pMXE	0.5	50	50	ENSMUST00000232447.2	ENSMUSG00000021639.18	Gtf2h2	chr13	protein_coding	general transcription factor II H, polypeptide 2
chr13	100677692	100689072	-	100677692	100688895	5pMXE	0.33	50	50	ENSMUST00000069756.11	ENSMUSG00000021638.13	Ocln	chr13	protein_coding	occludin
chr13	100671632	100688924	-	100671632	100675769	A5SS&ES	0.5	50	50	ENSMUST00000069756.11	ENSMUSG00000021638.13	Ocln	chr13	protein_coding	occludin
chr13	100677692	100688880	-	100677692	100688895	A5SS	0.33	50	50	ENSMUST00000069756.11	ENSMUSG00000021638.13	Ocln	chr13	protein_coding	occludin
chr13	100677692	100688880	-	100677692	100689072	A5SS	0.33	50	50	ENSMUST00000022140.12	ENSMUSG00000021638.13	Ocln	chr13	protein_coding	occludin
chr13	100677692	100689072	-	100671632	100689072	A3SS	0.5	50	50	ENSMUST00000159459.8	ENSMUSG00000021638.13	Ocln	chr13	protein_coding	occludin
chr13	100671632	100675769	-	100671632	100689072	A5SS	0.33	50	50	ENSMUST00000159459.8	ENSMUSG00000021638.13	Ocln	chr13	protein_coding	occludin
chr13	100671632	100688924	-	100671632	100689072	A5SS	0.33	50	50	ENSMUST00000159459.8	ENSMUSG00000021638.13	Ocln	chr13	protein_coding	occludin
chr13	100744320	100753113	-	100744320	100747941	A5SS&ES	0.5	50	50	ENSMUST00000022137.14	ENSMUSG00000021636.16	Marveld2	chr13	protein_coding	MARVEL (membrane-associating) domain containing 2
chr13	100749092	100753113	-	100749092	100753434	A5SS	0.5	50	50	ENSMUST00000022137.14	ENSMUSG00000021636.16	Marveld2	chr13	protein_coding	MARVEL (membrane-associating) domain containing 2
chr13	100744320	100753113	-	100744320;100749092	100747941;100753113	ES	0.5	50	50	ENSMUST00000225754.2	ENSMUSG00000021636.16	Marveld2	chr13	protein_coding	MARVEL (membrane-associating) domain containing 2
chr13	100749092	100753113	-	100744320	100753113	A3SS	0.5	50	50	ENSMUST00000163163.9	ENSMUSG00000021636.16	Marveld2	chr13	protein_coding	MARVEL (membrane-associating) domain containing 2
chr13	100773606;100774365	100774161;100780028	-	100773606	100780028	cassetteExon	0.5	100	100	ENSMUST00000022136.14	ENSMUSG00000021635.15	Rad17	chr13	protein_coding	RAD17 checkpoint clamp loader component
chr13	100786289	100787458	-	100786289	100787330	A5SS	0.5	50	50	ENSMUST00000022136.14	ENSMUSG00000021635.15	Rad17	chr13	protein_coding	RAD17 checkpoint clamp loader component
chr13	100790791	100791542	+	100790791	100800403	A3SS	0.5	50	50	ENSMUST00000022135.15	ENSMUSG00000078941.10	Ak6	chr13	protein_coding	adenylate kinase 6
chr13	100788225	100790699	+	100787953	100790699	A5SS	0.25	50	50	ENSMUST00000022135.15	ENSMUSG00000078941.10	Ak6	chr13	protein_coding	adenylate kinase 6
chr13	100788294	100790699	+	100787953	100790699	A5SS	0.25	50	50	ENSMUST00000022135.15	ENSMUSG00000078941.10	Ak6	chr13	protein_coding	adenylate kinase 6
chr13	100788336	100790699	+	100787953	100790699	A5SS	0.25	50	50	ENSMUST00000022135.15	ENSMUSG00000078941.10	Ak6	chr13	protein_coding	adenylate kinase 6
chr13	100788294	100790699	+	100788225	100790699	A5SS	0.25	50	50	ENSMUST00000190210.2	ENSMUSG00000078941.10	Ak6	chr13	protein_coding	adenylate kinase 6
chr13	100788336	100790699	+	100788225	100790699	A5SS	0.25	50	50	ENSMUST00000190210.2	ENSMUSG00000078941.10	Ak6	chr13	protein_coding	adenylate kinase 6
chr13	100788336	100790699	+	100788294	100790699	A5SS	0.25	50	50	ENSMUST00000185767.7	ENSMUSG00000052293.15	Taf9	chr13	protein_coding	TATA-box binding protein associated factor 9
chr13	100818375;100819352	100819275;100820794	+	100818375	100820794	cassetteExon	0.5	100	100	ENSMUST00000170347.4	ENSMUSG00000048924.15	Ccdc125	chr13	protein_coding	coiled-coil domain containing 125
chr13	100830216;100831008	100830878;100832619	+	100830216	100832619	cassetteExon	0.5	100	100	ENSMUST00000170347.4	ENSMUSG00000048924.15	Ccdc125	chr13	protein_coding	coiled-coil domain containing 125
chr13	100853127	100855810	-	100853127;100854190	100854080;100855810	ES	0.5	50	50	ENSMUST00000091299.8	ENSMUSG00000069089.9	Cdk7	chr13	protein_coding	cyclin-dependent kinase 7
chr13	100845596	100846582	-	100843024	100846582	A3SS	0.5	50	50	ENSMUST00000091299.8	ENSMUSG00000069089.9	Cdk7	chr13	protein_coding	cyclin-dependent kinase 7
chr13	100853127	100855810	-	100854190	100855810	3pMXE	0.5	50	50	ENSMUST00000225578.2	ENSMUSG00000069089.9	Cdk7	chr13	protein_coding	cyclin-dependent kinase 7
chr13	100877739;100880332	100880297;100881038	-	100877739	100881038	cassetteExon	0.5	100	100	ENSMUST00000109333.8	ENSMUSG00000061474.12	Mrps36	chr13	protein_coding	mitochondrial ribosomal protein S36
chr13	100875703	100877676	-	100875709	100877676	A3SS	0.5	50	50	ENSMUST00000109333.8	ENSMUSG00000061474.12	Mrps36	chr13	protein_coding	mitochondrial ribosomal protein S36
chr13	100877739	100880549	-	100877739	100881038	A5SS	0.33	50	50	ENSMUST00000109333.8	ENSMUSG00000061474.12	Mrps36	chr13	protein_coding	mitochondrial ribosomal protein S36
chr13	100877739	100880297	-	100877739	100880549	A5SS	0.33	50	50	ENSMUST00000132955.8	ENSMUSG00000061474.12	Mrps36	chr13	protein_coding	mitochondrial ribosomal protein S36
chr13	100880145	100880297	-	100877739	100880297	A3SS	0.5	50	50	ENSMUST00000076037.9	ENSMUSG00000061474.12	Mrps36	chr13	protein_coding	mitochondrial ribosomal protein S36
chr13	100877739	100881038	-	100877739	100880297	5pMXE	0.33	50	50	ENSMUST00000125206.2	ENSMUSG00000061474.12	Mrps36	chr13	protein_coding	mitochondrial ribosomal protein S36
chr13	100916293	100917284	-	100916293;100916640	100916530;100917284	ES	0.5	50	50	ENSMUST00000072119.15	ENSMUSG00000041431.17	Ccnb1	chr13	protein_coding	cyclin B1
chr13	100918291	100921965	-	100918291;100920155	100919973;100921965	ES	0.5	50	50	ENSMUST00000072119.15	ENSMUSG00000041431.17	Ccnb1	chr13	protein_coding	cyclin B1
chr13	100916293	100917284	-	100916293	100916530	A5SS	0.5	50	50	ENSMUST00000147790.2	ENSMUSG00000041431.17	Ccnb1	chr13	protein_coding	cyclin B1
chr13	100918291	100921965	-	100920155	100921965	3pMXE	0.5	50	50	ENSMUST00000128279.2	ENSMUSG00000041431.17	Ccnb1	chr13	protein_coding	cyclin B1
chr13	100950479	100953517	-	100950479;100951274	100951104;100953517	ES	0.5	50	50	ENSMUST00000067246.6	ENSMUSG00000021629.11	Slc30a5	chr13	protein_coding	solute carrier family 30 (zinc transporter), member 5
chr13	100949313	100949973	-	100949313	100949806	A5SS	0.5	50	50	ENSMUST00000067246.6	ENSMUSG00000021629.11	Slc30a5	chr13	protein_coding	solute carrier family 30 (zinc transporter), member 5
chr13	100950479	100953517	-	100950479	100951104	5pMXE	0.5	50	50	ENSMUST00000225086.2	ENSMUSG00000021629.11	Slc30a5	chr13	protein_coding	solute carrier family 30 (zinc transporter), member 5
chr13	101415432	101429170	+	101415432	101535218	A3SS	0.5	50	50	ENSMUST00000210384.2	ENSMUSG00000100733.3	4932411K12Rik	chr13	lncRNA	RIKEN cDNA 4932411K12 gene
chr13	101569366	101577642	+	101569366	101597736	A3SS	0.5	50	50	ENSMUST00000210384.2	ENSMUSG00000100733.3	4932411K12Rik	chr13	lncRNA	RIKEN cDNA 4932411K12 gene
chr13	101534459	101535218	+	101415432	101535218	A5SS	0.5	50	50	ENSMUST00000210384.2	ENSMUSG00000100733.3	4932411K12Rik	chr13	lncRNA	RIKEN cDNA 4932411K12 gene
chr13	101578988	101597736	+	101569366	101597736	A5SS	0.5	50	50	ENSMUST00000210384.2	ENSMUSG00000100733.3	4932411K12Rik	chr13	lncRNA	RIKEN cDNA 4932411K12 gene
chr13	101827091	101828691	-	101827091	101837955	A5SS	0.25	50	50	ENSMUST00000055518.13	ENSMUSG00000041417.16	Pik3r1	chr13	protein_coding	phosphoinositide-3-kinase regulatory subunit 1
chr13	101827091	101828955	-	101827091	101837955	A5SS	0.25	50	50	ENSMUST00000055518.13	ENSMUSG00000041417.16	Pik3r1	chr13	protein_coding	phosphoinositide-3-kinase regulatory subunit 1
chr13	101827091	101830884	-	101827091	101837955	A5SS	0.25	50	50	ENSMUST00000055518.13	ENSMUSG00000041417.16	Pik3r1	chr13	protein_coding	phosphoinositide-3-kinase regulatory subunit 1
chr13	101827091	101830884	-	101827091	101828691	5pMXE	0.25	50	50	ENSMUST00000035532.13	ENSMUSG00000041417.16	Pik3r1	chr13	protein_coding	phosphoinositide-3-kinase regulatory subunit 1
chr13	101827091	101828955	-	101827091	101828691	A5SS	0.25	50	50	ENSMUST00000035532.13	ENSMUSG00000041417.16	Pik3r1	chr13	protein_coding	phosphoinositide-3-kinase regulatory subunit 1
chr13	101827091	101830884	-	101827091	101828955	5pMXE	0.25	50	50	ENSMUST00000187009.7	ENSMUSG00000041417.16	Pik3r1	chr13	protein_coding	phosphoinositide-3-kinase regulatory subunit 1
chr13	102839375	102875674	+	102839375	102841213	3pMXE	0.5	50	50	ENSMUST00000022124.10	ENSMUSG00000021624.10	Cd180	chr13	protein_coding	CD180 antigen
chr13	102830297	102841362	+	102830297	102839209	A3SS&ES	0.5	50	50	ENSMUST00000022124.10	ENSMUSG00000021624.10	Cd180	chr13	protein_coding	CD180 antigen
chr13	102830297	102875674	+	102830297	102839209	3pMXE	0.33	50	50	ENSMUST00000171267.2	ENSMUSG00000021624.10	Cd180	chr13	protein_coding	CD180 antigen
chr13	102830297	102875674	+	102830297	102841362	3pMXE	0.33	50	50	ENSMUST00000167144.2	ENSMUSG00000021624.10	Cd180	chr13	protein_coding	CD180 antigen
chr13	102830297	102875674	+	102830297;102839375	102839209;102875674	ES	0.5	50	50	ENSMUST00000170878.2	ENSMUSG00000021624.10	Cd180	chr13	protein_coding	CD180 antigen
chr13	102888118;102890764	102890564;102895010	-	102888118	102895010	cassetteExon	0.5	100	100	ENSMUST00000166726.8	ENSMUSG00000034751.18	Mast4	chr13	protein_coding	microtubule associated serine/threonine kinase family member 4
chr13	102941228;102942667	102942659;102947009	-	102941228	102947009	cassetteExon	0.5	100	100	ENSMUST00000166726.8	ENSMUSG00000034751.18	Mast4	chr13	protein_coding	microtubule associated serine/threonine kinase family member 4
chr13	102990427;103143748	103143713;103162030	-	102990427	103162030	cassetteExon	0.5	100	100	ENSMUST00000166726.8	ENSMUSG00000034751.18	Mast4	chr13	protein_coding	microtubule associated serine/threonine kinase family member 4
chr13	102875887	102878454	-	102871383	102878454	A3SS	0.5	50	50	ENSMUST00000166726.8	ENSMUSG00000034751.18	Mast4	chr13	protein_coding	microtubule associated serine/threonine kinase family member 4
chr13	103195265	103276671	-	103162061	103276671	A3SS	0.33	50	50	ENSMUST00000166726.8	ENSMUSG00000034751.18	Mast4	chr13	protein_coding	microtubule associated serine/threonine kinase family member 4
chr13	103208792	103276671	-	103162061	103276671	A3SS	0.33	50	50	ENSMUST00000166726.8	ENSMUSG00000034751.18	Mast4	chr13	protein_coding	microtubule associated serine/threonine kinase family member 4
chr13	103304646	103307911	-	103276795	103307911	A3SS	0.5	50	50	ENSMUST00000166726.8	ENSMUSG00000034751.18	Mast4	chr13	protein_coding	microtubule associated serine/threonine kinase family member 4
chr13	102990427	103042157	-	102990427	103162030	A5SS	0.2	50	50	ENSMUST00000166726.8	ENSMUSG00000034751.18	Mast4	chr13	protein_coding	microtubule associated serine/threonine kinase family member 4
chr13	102990427	103089634	-	102990427	103162030	A5SS	0.2	50	50	ENSMUST00000166726.8	ENSMUSG00000034751.18	Mast4	chr13	protein_coding	microtubule associated serine/threonine kinase family member 4
chr13	102990427	103094546	-	102990427	103162030	A5SS	0.2	50	50	ENSMUST00000166726.8	ENSMUSG00000034751.18	Mast4	chr13	protein_coding	microtubule associated serine/threonine kinase family member 4
chr13	103162061	103194349	-	103162061	103276671	A5SS	0.33	50	50	ENSMUST00000166726.8	ENSMUSG00000034751.18	Mast4	chr13	protein_coding	microtubule associated serine/threonine kinase family member 4
chr13	103162061	103233256	-	103162061	103276671	A5SS	0.33	50	50	ENSMUST00000166726.8	ENSMUSG00000034751.18	Mast4	chr13	protein_coding	microtubule associated serine/threonine kinase family member 4
chr13	103162061	103233256	-	103162061;103194423	103194349;103233256	ES	0.5	50	50	ENSMUST00000239261.2	ENSMUSG00000034751.18	Mast4	chr13	protein_coding	microtubule associated serine/threonine kinase family member 4
chr13	102990427	103042157	-	102990427	103143713	A5SS	0.2	50	50	ENSMUST00000194446.7	ENSMUSG00000034751.18	Mast4	chr13	protein_coding	microtubule associated serine/threonine kinase family member 4
chr13	102990427	103089634	-	102990427	103143713	A5SS	0.2	50	50	ENSMUST00000194446.7	ENSMUSG00000034751.18	Mast4	chr13	protein_coding	microtubule associated serine/threonine kinase family member 4
chr13	102990427	103094546	-	102990427	103143713	A5SS	0.2	50	50	ENSMUST00000194446.7	ENSMUSG00000034751.18	Mast4	chr13	protein_coding	microtubule associated serine/threonine kinase family member 4
chr13	102990427	103089634	-	102990427	103042157	5pMXE	0.2	50	50	ENSMUST00000171791.8	ENSMUSG00000034751.18	Mast4	chr13	protein_coding	microtubule associated serine/threonine kinase family member 4
chr13	102990427	103094546	-	102990427	103042157	5pMXE	0.2	50	50	ENSMUST00000171791.8	ENSMUSG00000034751.18	Mast4	chr13	protein_coding	microtubule associated serine/threonine kinase family member 4
chr13	102990427	103094546	-	102990427;103089714	103089634;103094546	ES	0.5	50	50	ENSMUST00000099202.10	ENSMUSG00000034751.18	Mast4	chr13	protein_coding	microtubule associated serine/threonine kinase family member 4
chr13	102888118	102895010	-	102890764	102895010	3pMXE	0.5	50	50	ENSMUST00000172264.8	ENSMUSG00000034751.18	Mast4	chr13	protein_coding	microtubule associated serine/threonine kinase family member 4
chr13	103208792	103276671	-	103195265	103276671	A3SS	0.33	50	50	ENSMUST00000171358.8	ENSMUSG00000034751.18	Mast4	chr13	protein_coding	microtubule associated serine/threonine kinase family member 4
chr13	102896804	102897490	+	102896804	102897770	A3SS	0.5	50	50	ENSMUST00000171722.2	ENSMUSG00000091906.3	1700099I09Rik	chr13	lncRNA	RIKEN cDNA 1700099I09 gene
chr13	103813607	103844022	-	103733146	103844022	A3SS	0.5	50	50	ENSMUST00000225130.2	ENSMUSG00000114206.2	Gm30551	chr13	lncRNA	predicted gene, 30551
chr13	103894996	103895677	-	103894808	103895677	A3SS	0.5	50	50	ENSMUST00000210489.2	ENSMUSG00000032621.9	Srek1	chr13	protein_coding	splicing regulatory glutamine/lysine-rich protein 1
chr13	103900514;103904730	103904566;103905825	-	103900514	103905825	cassetteExon	0.5	100	100	ENSMUST00000074616.7	ENSMUSG00000032621.9	Srek1	chr13	protein_coding	splicing regulatory glutamine/lysine-rich protein 1
chr13	103903542	103905825	-	103900514	103905825	A3SS	0.33	50	50	ENSMUST00000074616.7	ENSMUSG00000032621.9	Srek1	chr13	protein_coding	splicing regulatory glutamine/lysine-rich protein 1
chr13	103900514	103900804	-	103900514	103905825	A5SS	0.33	50	50	ENSMUST00000074616.7	ENSMUSG00000032621.9	Srek1	chr13	protein_coding	splicing regulatory glutamine/lysine-rich protein 1
chr13	103905958	103910076	-	103905958	103910807	A5SS	0.5	50	50	ENSMUST00000074616.7	ENSMUSG00000032621.9	Srek1	chr13	protein_coding	splicing regulatory glutamine/lysine-rich protein 1
chr13	103900514	103904566	-	103900514;103900927	103900804;103904566	ES	0.5	50	50	ENSMUST00000211491.2	ENSMUSG00000032621.9	Srek1	chr13	protein_coding	splicing regulatory glutamine/lysine-rich protein 1
chr13	103903542	103905825	-	103904730	103905825	A3SS&ES	0.33	50	50	ENSMUST00000211491.2	ENSMUSG00000032621.9	Srek1	chr13	protein_coding	splicing regulatory glutamine/lysine-rich protein 1
chr13	103900927	103902919	-	103900927	103904566	A5SS	0.5	50	50	ENSMUST00000211491.2	ENSMUSG00000032621.9	Srek1	chr13	protein_coding	splicing regulatory glutamine/lysine-rich protein 1
chr13	103900514	103905825	-	103900514	103904566	5pMXE	0.33	50	50	ENSMUST00000209961.2	ENSMUSG00000032621.9	Srek1	chr13	protein_coding	splicing regulatory glutamine/lysine-rich protein 1
chr13	103964531;103966839	103966696;103970006	-	103964531	103970006	cassetteExon	0.5	100	100	ENSMUST00000022222.12	ENSMUSG00000021709.15	Erbin	chr13	protein_coding	Erbb2 interacting protein
chr13	103961434	103964415	-	103961356	103964415	A3SS	0.5	50	50	ENSMUST00000022222.12	ENSMUSG00000021709.15	Erbin	chr13	protein_coding	Erbb2 interacting protein
chr13	103991396	103992503	-	103991396	103993503	A5SS	0.5	50	50	ENSMUST00000022222.12	ENSMUSG00000021709.15	Erbin	chr13	protein_coding	Erbb2 interacting protein
chr13	103961434;103966839	103966696;103970006	-	103961434;103964531	103964415;103970006	MXE	0.5	100	100	ENSMUST00000091269.11	ENSMUSG00000021709.15	Erbin	chr13	protein_coding	Erbb2 interacting protein
chr13	103964531	103970006	-	103959914	103970006	A3SS	0.33	50	50	ENSMUST00000188997.7	ENSMUSG00000021709.15	Erbin	chr13	protein_coding	Erbb2 interacting protein
chr13	103966839	103970006	-	103959914	103970006	A3SS	0.33	50	50	ENSMUST00000188997.7	ENSMUSG00000021709.15	Erbin	chr13	protein_coding	Erbb2 interacting protein
chr13	103959914	103961228	-	103959914	103970006	A5SS	0.5	50	50	ENSMUST00000188997.7	ENSMUSG00000021709.15	Erbin	chr13	protein_coding	Erbb2 interacting protein
chr13	103961434;103964531	103964415;103966696	-	103961434	103966696	cassetteExon	0.5	100	100	ENSMUST00000169083.8	ENSMUSG00000021709.15	Erbin	chr13	protein_coding	Erbb2 interacting protein
chr13	104161588	104171014	-	104161588	104172095	A5SS	0.5	50	50	ENSMUST00000109315.5	ENSMUSG00000021710.12	Nln	chr13	protein_coding	neurolysin (metallopeptidase M3 family)
chr13	104172231	104172962	-	104172231	104173362	A5SS	0.5	50	50	ENSMUST00000109315.5	ENSMUSG00000021710.12	Nln	chr13	protein_coding	neurolysin (metallopeptidase M3 family)
chr13	104247697	104257975	+	104247697;104254935	104254832;104257975	ES	0.5	50	50	ENSMUST00000044385.14	ENSMUSG00000042743.14	Sgtb	chr13	protein_coding	small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
chr13	104246501	104247578	+	104246477	104247578	A5SS	0.5	50	50	ENSMUST00000044385.14	ENSMUSG00000042743.14	Sgtb	chr13	protein_coding	small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
chr13	104286691;104288690	104288673;104290804	-	104286691	104290804	cassetteExon	0.5	100	100	ENSMUST00000144060.8	ENSMUSG00000021711.18	Trappc13	chr13	protein_coding	trafficking protein particle complex 13
chr13	104281059	104283752	-	104281062	104283752	A3SS	0.5	50	50	ENSMUST00000144060.8	ENSMUSG00000021711.18	Trappc13	chr13	protein_coding	trafficking protein particle complex 13
chr13	104311512	104314622	-	104306396	104314622	A3SS	0.5	50	50	ENSMUST00000144060.8	ENSMUSG00000021711.18	Trappc13	chr13	protein_coding	trafficking protein particle complex 13
chr13	104286691	104290728	-	104286691	104290804	A5SS	0.33	50	50	ENSMUST00000144060.8	ENSMUSG00000021711.18	Trappc13	chr13	protein_coding	trafficking protein particle complex 13
chr13	104286691	104290728	-	104286691	104288673	A5SS&ES	0.33	50	50	ENSMUST00000141557.8	ENSMUSG00000021711.18	Trappc13	chr13	protein_coding	trafficking protein particle complex 13
chr13	104324187	104326171	+	104324187;104324751	104324569;104326171	ES	0.5	50	50	ENSMUST00000022225.12	ENSMUSG00000021712.16	Trim23	chr13	protein_coding	tripartite motif-containing 23
chr13	104359700	104361869	-	104359700	104361858	A5SS	0.5	50	50	ENSMUST00000022226.6	ENSMUSG00000021713.10	Ppwd1	chr13	protein_coding	peptidylprolyl isomerase domain and WD repeat containing 1
chr13	104381839	104383075	+	104381839	104385869	A3SS	0.5	50	50	ENSMUST00000224500.2	ENSMUSG00000021714.16	Cenpk	chr13	protein_coding	centromere protein K
chr13	104366164	104367237	+	104365510	104367237	A5SS	0.5	50	50	ENSMUST00000224500.2	ENSMUSG00000021714.16	Cenpk	chr13	protein_coding	centromere protein K
chr13	104370727	104372687	+	104370740	104372687	A5SS	0.5	50	50	ENSMUST00000224500.2	ENSMUSG00000021714.16	Cenpk	chr13	protein_coding	centromere protein K
chr13	104374887	104378697	+	104372733	104378697	A5SS	0.5	50	50	ENSMUST00000224500.2	ENSMUSG00000021714.16	Cenpk	chr13	protein_coding	centromere protein K
chr13	104370727	104371505	+	104370727	104372687	A3SS	0.5	50	50	ENSMUST00000070761.10	ENSMUSG00000021714.16	Cenpk	chr13	protein_coding	centromere protein K
chr13	104450227	104483856	+	104450227;104450891	104450746;104483856	ES	0.5	50	50	ENSMUST00000224784.2	ENSMUSG00000046169.11	Adamts6	chr13	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6
chr13	104503448	104512150	+	104503448;104506298	104506162;104512150	ES	0.5	50	50	ENSMUST00000224784.2	ENSMUSG00000046169.11	Adamts6	chr13	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6
chr13	104563576	104566298	+	104563576;104565466	104565343;104566298	ES	0.5	50	50	ENSMUST00000224784.2	ENSMUSG00000046169.11	Adamts6	chr13	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6
chr13	104536514;104550318	104550216;104563443	+	104536514	104563443	cassetteExon	0.5	100	100	ENSMUST00000224784.2	ENSMUSG00000046169.11	Adamts6	chr13	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6
chr13	104449434	104450139	+	104449434	104450144	A3SS	0.5	50	50	ENSMUST00000224784.2	ENSMUSG00000046169.11	Adamts6	chr13	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6
chr13	104424508	104430955	+	104424621	104430955	A5SS	0.5	50	50	ENSMUST00000224784.2	ENSMUSG00000046169.11	Adamts6	chr13	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6
chr13	104581461	104598736	+	104582212	104598736	A5SS	0.5	50	50	ENSMUST00000224784.2	ENSMUSG00000046169.11	Adamts6	chr13	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6
chr13	104581461	104581652	+	104581461	104598736	A3SS	0.5	50	50	ENSMUST00000065766.7	ENSMUSG00000046169.11	Adamts6	chr13	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6
chr13	104883493	104929007	-	104857027	104929007	A3SS	0.33	50	50	ENSMUST00000022228.13	ENSMUSG00000021715.13	Cwc27	chr13	protein_coding	CWC27 spliceosome-associated protein
chr13	104927286	104929007	-	104857027	104929007	A3SS	0.33	50	50	ENSMUST00000022228.13	ENSMUSG00000021715.13	Cwc27	chr13	protein_coding	CWC27 spliceosome-associated protein
chr13	104927286	104929007	-	104883493	104929007	A3SS	0.33	50	50	ENSMUST00000141495.2	ENSMUSG00000021715.13	Cwc27	chr13	protein_coding	CWC27 spliceosome-associated protein
chr13	104953874	104963563	+	104929173	104963563	A5SS	0.5	50	50	ENSMUST00000145661.8	ENSMUSG00000021716.15	Srek1ip1	chr13	protein_coding	splicing regulatory glutamine/lysine-rich protein 1interacting protein 1
chr13	104969613	104970756	+	104969505	104970756	A5SS	0.5	50	50	ENSMUST00000145661.8	ENSMUSG00000021716.15	Srek1ip1	chr13	protein_coding	splicing regulatory glutamine/lysine-rich protein 1interacting protein 1
chr13	104982571	104999710	-	104982571	104994797	A5SS&ES	0.5	50	50	ENSMUST00000043061.5	ENSMUSG00000042655.6	Shisal2b	chr13	protein_coding	shisa like 2B
chr13	104994954	104999710	-	104994954	105000031	A5SS	0.5	50	50	ENSMUST00000043061.5	ENSMUSG00000042655.6	Shisal2b	chr13	protein_coding	shisa like 2B
chr13	104982571	104999710	-	104982571;104994954	104994797;104999710	ES	0.5	50	50	ENSMUST00000223913.2	ENSMUSG00000042655.6	Shisal2b	chr13	protein_coding	shisa like 2B
chr13	105407547	105431260	-	105407547	105430771	5pMXE	0.33	50	50	ENSMUST00000226044.2	ENSMUSG00000021720.12	Rnf180	chr13	protein_coding	ring finger protein 180
chr13	105286008	105304036	-	105268071	105304036	A3SS	0.5	50	50	ENSMUST00000226044.2	ENSMUSG00000021720.12	Rnf180	chr13	protein_coding	ring finger protein 180
chr13	105388858	105407413	-	105388855	105407413	A3SS	0.5	50	50	ENSMUST00000226044.2	ENSMUSG00000021720.12	Rnf180	chr13	protein_coding	ring finger protein 180
chr13	105407547	105429324	-	105407547	105430771	A5SS	0.33	50	50	ENSMUST00000226044.2	ENSMUSG00000021720.12	Rnf180	chr13	protein_coding	ring finger protein 180
chr13	105407547	105431260	-	105407547	105429324	5pMXE	0.33	50	50	ENSMUST00000224011.2	ENSMUSG00000021720.12	Rnf180	chr13	protein_coding	ring finger protein 180
chr13	106993816	106997369	-	106993816;106994033	106994007;106997369	ES	0.5	50	50	ENSMUST00000186033.7	ENSMUSG00000042590.18	Ipo11	chr13	protein_coding	importin 11
chr13	106959559;106972934	106972720;106978597	-	106959559	106978597	cassetteExon	0.5	100	100	ENSMUST00000186033.7	ENSMUSG00000042590.18	Ipo11	chr13	protein_coding	importin 11
chr13	106978718	106983473	-	106978718	106983854	A5SS	0.5	50	50	ENSMUST00000186033.7	ENSMUSG00000042590.18	Ipo11	chr13	protein_coding	importin 11
chr13	106971120	106972720	-	106959559	106972720	A3SS	0.33	50	50	ENSMUST00000190801.7	ENSMUSG00000042590.18	Ipo11	chr13	protein_coding	importin 11
chr13	106971344	106972720	-	106959559	106972720	A3SS	0.33	50	50	ENSMUST00000190801.7	ENSMUSG00000042590.18	Ipo11	chr13	protein_coding	importin 11
chr13	106959559	106978597	-	106959559	106972720	5pMXE	0.5	50	50	ENSMUST00000191312.2	ENSMUSG00000042590.18	Ipo11	chr13	protein_coding	importin 11
chr13	106971120	106972720	-	106971344	106972720	A3SS	0.33	50	50	ENSMUST00000057427.11	ENSMUSG00000118423.2	Lrrc70	chr13	transcribed_unitary_pseudogene	leucine rich repeat containing 70
chr13	107084167	107085209	+	107084167;107084628	107084576;107085209	ES	0.5	50	50	ENSMUST00000224052.2	ENSMUSG00000021692.10	Dimt1	chr13	protein_coding	DIM1 dimethyladenosine transferase 1-like (S. cerevisiae)
chr13	107105296	107111879	-	107105296;107111070	107111003;107111879	ES	0.5	50	50	ENSMUST00000022204.16	ENSMUSG00000021693.21	Kif2a	chr13	protein_coding	kinesin family member 2A
chr13	107123877	107126546	-	107123877;107124583	107124461;107126546	ES	0.5	50	50	ENSMUST00000022204.16	ENSMUSG00000021693.21	Kif2a	chr13	protein_coding	kinesin family member 2A
chr13	107105296;107106325	107106212;107111003	-	107105296	107111003	cassetteExon	0.5	100	100	ENSMUST00000022204.16	ENSMUSG00000021693.21	Kif2a	chr13	protein_coding	kinesin family member 2A
chr13	107130450;107133637	107133255;107158520	-	107130450	107158520	cassetteExon	0.5	100	100	ENSMUST00000022204.16	ENSMUSG00000021693.21	Kif2a	chr13	protein_coding	kinesin family member 2A
chr13	107123877	107124518	-	107123877	107124461	A5SS	0.33	50	50	ENSMUST00000022204.16	ENSMUSG00000021693.21	Kif2a	chr13	protein_coding	kinesin family member 2A
chr13	107123877	107126546	-	107123877;107124583	107124518;107126546	ES	0.5	50	50	ENSMUST00000117423.9	ENSMUSG00000021693.21	Kif2a	chr13	protein_coding	kinesin family member 2A
chr13	107130450	107158520	-	107130450	107133255	5pMXE	0.5	50	50	ENSMUST00000117423.9	ENSMUSG00000021693.21	Kif2a	chr13	protein_coding	kinesin family member 2A
chr13	107105296	107106212	-	107105296	107111879	A5SS	0.33	50	50	ENSMUST00000162845.2	ENSMUSG00000021693.21	Kif2a	chr13	protein_coding	kinesin family member 2A
chr13	107162963	107169284	+	107162963	107168232	3pMXE	0.33	50	50	ENSMUST00000225489.2	ENSMUSG00000071181.3	3830408C21Rik	chr13	lncRNA	RIKEN cDNA 3830408C21 gene
chr13	107162963	107165313	+	107162963	107168232	A3SS	0.33	50	50	ENSMUST00000225489.2	ENSMUSG00000071181.3	3830408C21Rik	chr13	lncRNA	RIKEN cDNA 3830408C21 gene
chr13	107162467	107162907	+	107160490	107162907	A5SS	0.5	50	50	ENSMUST00000225489.2	ENSMUSG00000071181.3	3830408C21Rik	chr13	lncRNA	RIKEN cDNA 3830408C21 gene
chr13	107169457	107191362	+	107169457	107169773	3pMXE	0.5	50	50	ENSMUST00000225426.2	ENSMUSG00000071181.3	3830408C21Rik	chr13	lncRNA	RIKEN cDNA 3830408C21 gene
chr13	107162963;107168492	107168232;107169284	+	107162963	107169284	cassetteExon	0.5	100	100	ENSMUST00000225426.2	ENSMUSG00000071181.3	3830408C21Rik	chr13	lncRNA	RIKEN cDNA 3830408C21 gene
chr13	107162963	107165313	+	107162963	107169284	A3SS	0.33	50	50	ENSMUST00000225426.2	ENSMUSG00000071181.3	3830408C21Rik	chr13	lncRNA	RIKEN cDNA 3830408C21 gene
chr13	107606426	107619082	+	107606426	107609048	3pMXE	0.33	50	50	ENSMUST00000225957.2	ENSMUSG00000114780.2	AI197445	chr13	lncRNA	expressed sequence AI197445
chr13	107606426	107608947	+	107606426	107609048	A3SS	0.33	50	50	ENSMUST00000225957.2	ENSMUSG00000114780.2	AI197445	chr13	lncRNA	expressed sequence AI197445
chr13	107606426	107608947	+	107606426	107619082	A3SS	0.33	50	50	ENSMUST00000223617.2	ENSMUSG00000114780.2	AI197445	chr13	lncRNA	expressed sequence AI197445
chr13	107660994;107662782	107662636;107675243	-	107660994	107675243	cassetteExon	0.5	100	100	ENSMUST00000225322.2	ENSMUSG00000114534.2	Gm32004	chr13	lncRNA	predicted gene, 32004
chr13	107673351	107675243	-	107660994	107675243	A3SS	0.33	50	50	ENSMUST00000225322.2	ENSMUSG00000114534.2	Gm32004	chr13	lncRNA	predicted gene, 32004
chr13	107662782;107673351	107673294;107675243	-	107662782	107675243	cassetteExon	0.5	100	100	ENSMUST00000224941.2	ENSMUSG00000114534.2	Gm32004	chr13	lncRNA	predicted gene, 32004
chr13	107824119;107826638	107826483;107828426	+	107824119	107828426	cassetteExon	0.5	100	100	ENSMUST00000188960.7	ENSMUSG00000102000.7	1700006H21Rik	chr13	lncRNA	RIKEN cDNA 1700006H21 gene
chr13	107876914;107880217	107880071;107880496	-	107876914	107880496	cassetteExon	0.5	100	100	ENSMUST00000225822.4	ENSMUSG00000032846.13	Zswim6	chr13	protein_coding	zinc finger SWIM-type containing 6
chr13	108228157	108294977	-	108160854	108294977	A3SS	0.5	50	50	ENSMUST00000225702.2	ENSMUSG00000068184.8	Ndufaf2	chr13	protein_coding	NADH:ubiquinone oxidoreductase complex assembly factor 2
chr13	108189488	108228068	-	108189488;108217927	108217887;108228068	ES	0.5	50	50	ENSMUST00000163558.3	ENSMUSG00000068184.8	Ndufaf2	chr13	protein_coding	NADH:ubiquinone oxidoreductase complex assembly factor 2
chr13	108216937	108217887	-	108189488	108217887	A3SS	0.5	50	50	ENSMUST00000163558.3	ENSMUSG00000068184.8	Ndufaf2	chr13	protein_coding	NADH:ubiquinone oxidoreductase complex assembly factor 2
chr13	108183102	108183920	+	108183102	108183974	A3SS	0.33	50	50	ENSMUST00000095458.6	ENSMUSG00000071180.6	Smim15	chr13	protein_coding	small integral membrane protein 15
chr13	108183102	108183996	+	108183102	108183974	A3SS	0.33	50	50	ENSMUST00000095458.6	ENSMUSG00000071180.6	Smim15	chr13	protein_coding	small integral membrane protein 15
chr13	108181167	108182959	+	108181020	108182959	A5SS	0.33	50	50	ENSMUST00000095458.6	ENSMUSG00000071180.6	Smim15	chr13	protein_coding	small integral membrane protein 15
chr13	108181242	108182959	+	108181020	108182959	A5SS	0.33	50	50	ENSMUST00000095458.6	ENSMUSG00000071180.6	Smim15	chr13	protein_coding	small integral membrane protein 15
chr13	108183102	108183996	+	108183102	108183920	A3SS	0.33	50	50	ENSMUST00000223808.2	ENSMUSG00000071180.6	Smim15	chr13	protein_coding	small integral membrane protein 15
chr13	108181242	108182959	+	108181167	108182959	A5SS	0.33	50	50	ENSMUST00000226042.2	ENSMUSG00000071180.6	Smim15	chr13	protein_coding	small integral membrane protein 15
chr13	108306025	108310526	+	108306025;108309317	108309236;108310526	ES	0.5	50	50	ENSMUST00000123657.8	ENSMUSG00000021694.19	Ercc8	chr13	protein_coding	excision repaiross-complementing rodent repair deficiency, complementation group 8
chr13	108297264;108303025	108302924;108305902	+	108297264	108305902	cassetteExon	0.5	100	100	ENSMUST00000123657.8	ENSMUSG00000021694.19	Ercc8	chr13	protein_coding	excision repaiross-complementing rodent repair deficiency, complementation group 8
chr13	108312154;108312440	108312339;108314151	+	108312154	108314151	cassetteExon	0.5	100	100	ENSMUST00000123657.8	ENSMUSG00000021694.19	Ercc8	chr13	protein_coding	excision repaiross-complementing rodent repair deficiency, complementation group 8
chr13	108309317	108309579	+	108309317	108310526	A3SS	0.5	50	50	ENSMUST00000123657.8	ENSMUSG00000021694.19	Ercc8	chr13	protein_coding	excision repaiross-complementing rodent repair deficiency, complementation group 8
chr13	108315230	108320357	+	108315230	108320259	A3SS	0.5	50	50	ENSMUST00000123657.8	ENSMUSG00000021694.19	Ercc8	chr13	protein_coding	excision repaiross-complementing rodent repair deficiency, complementation group 8
chr13	108310545	108312088	+	108310594	108312088	A5SS	0.5	50	50	ENSMUST00000123657.8	ENSMUSG00000021694.19	Ercc8	chr13	protein_coding	excision repaiross-complementing rodent repair deficiency, complementation group 8
chr13	108403868	108407167	+	108403914	108407167	A5SS	0.5	50	50	ENSMUST00000022207.10	ENSMUSG00000021696.10	Elovl7	chr13	protein_coding	ELOVL family member 7, elongation of long chain fatty acids (yeast)
chr13	108521436	108525075	+	108521436;108523554	108523369;108525075	ES	0.5	50	50	ENSMUST00000051594.12	ENSMUSG00000021697.13	Depdc1b	chr13	protein_coding	DEP domain containing 1B
chr13	108463167	108493928	+	108460705	108493928	A5SS	0.5	50	50	ENSMUST00000051594.12	ENSMUSG00000021697.13	Depdc1b	chr13	protein_coding	DEP domain containing 1B
chr13	108790799	108996609	+	108790799;108822725	108822532;108996609	ES	0.33	50	50	ENSMUST00000133929.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	108586602;108673177	108673087;108790639	+	108586602	108790639	cassetteExon	0.5	100	100	ENSMUST00000133929.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	108790799	108822528	+	108790799	108822532	A3SS	0.33	50	50	ENSMUST00000133929.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	108822627	108996609	+	108822725	108996609	A5SS	0.33	50	50	ENSMUST00000133929.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	108790799	108996609	+	108790799;108822627	108822528;108996609	ES	0.33	50	50	ENSMUST00000151111.2	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	108790799;108822725	108822528;108996609	+	108790799	108996609	cassetteExon	0.5	100	100	ENSMUST00000122041.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	108790799;108822627	108822532;108996609	+	108790799	108996609	cassetteExon	0.5	100	100	ENSMUST00000122041.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109894147	109897710	+	109894147	109906068	A3SS	0.5	50	50	ENSMUST00000122041.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	110075895	110084700	+	110075895	110084774	A3SS	0.5	50	50	ENSMUST00000122041.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109253614	109876921	+	109169231	109876921	A5SS	0.12	50	50	ENSMUST00000122041.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109397479	109876921	+	109169231	109876921	A5SS	0.12	50	50	ENSMUST00000122041.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109537425	109876921	+	109169231	109876921	A5SS	0.12	50	50	ENSMUST00000122041.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109578887	109876921	+	109169231	109876921	A5SS	0.12	50	50	ENSMUST00000122041.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109718246	109876921	+	109169231	109876921	A5SS	0.12	50	50	ENSMUST00000122041.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109769444	109876921	+	109169231	109876921	A5SS	0.12	50	50	ENSMUST00000122041.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109822754	109876921	+	109169231	109876921	A5SS	0.12	50	50	ENSMUST00000122041.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109893804	109894111	+	109877112	109894111	A5SS	0.5	50	50	ENSMUST00000122041.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	110040024	110040111	+	109909214	110040111	A5SS	0.5	50	50	ENSMUST00000122041.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	110059519	110070402	+	110040223	110070402	A5SS	0.25	50	50	ENSMUST00000122041.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	110061814	110070402	+	110040223	110070402	A5SS	0.25	50	50	ENSMUST00000122041.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	110063806	110070402	+	110040223	110070402	A5SS	0.25	50	50	ENSMUST00000122041.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109253614	109537398	+	109253614	109470046	3pMXE	0.33	50	50	ENSMUST00000129374.2	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109253614	109876921	+	109253614	109470046	3pMXE	0.33	50	50	ENSMUST00000129374.2	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109253614	109876921	+	109253614;109537425	109537398;109876921	ES	0.14	50	50	ENSMUST00000138938.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109397479	109876921	+	109537425	109876921	A5SS&ES	0.14	50	50	ENSMUST00000138938.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109578887	109876921	+	109537425	109876921	A5SS	0.14	50	50	ENSMUST00000138938.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109718246	109876921	+	109537425	109876921	A5SS	0.14	50	50	ENSMUST00000138938.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109769444	109876921	+	109537425	109876921	A5SS	0.14	50	50	ENSMUST00000138938.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109822754	109876921	+	109537425	109876921	A5SS	0.14	50	50	ENSMUST00000138938.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109397479	109876921	+	109253614	109876921	A5SS	0.12	50	50	ENSMUST00000120671.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109578887	109876921	+	109253614	109876921	A5SS	0.12	50	50	ENSMUST00000120671.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109718246	109876921	+	109253614	109876921	A5SS	0.12	50	50	ENSMUST00000120671.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109769444	109876921	+	109253614	109876921	A5SS	0.12	50	50	ENSMUST00000120671.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109822754	109876921	+	109253614	109876921	A5SS	0.12	50	50	ENSMUST00000120671.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109578887	109876921	+	109397479	109876921	A5SS	0.12	50	50	ENSMUST00000153234.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109718246	109876921	+	109397479	109876921	A5SS	0.12	50	50	ENSMUST00000153234.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109769444	109876921	+	109397479	109876921	A5SS	0.12	50	50	ENSMUST00000153234.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109822754	109876921	+	109397479	109876921	A5SS	0.12	50	50	ENSMUST00000153234.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109718246	109876921	+	109578887	109876921	A5SS	0.12	50	50	ENSMUST00000119507.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109769444	109876921	+	109578887	109876921	A5SS	0.12	50	50	ENSMUST00000119507.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109822754	109876921	+	109578887	109876921	A5SS	0.12	50	50	ENSMUST00000119507.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109769444	109876921	+	109718246	109876921	A5SS	0.12	50	50	ENSMUST00000079975.11	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109822754	109876921	+	109718246	109876921	A5SS	0.12	50	50	ENSMUST00000079975.11	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	109822754	109876921	+	109769444	109876921	A5SS	0.12	50	50	ENSMUST00000135275.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	110061814	110070402	+	110059519	110070402	A5SS	0.25	50	50	ENSMUST00000151429.2	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	110063806	110070402	+	110059519	110070402	A5SS	0.25	50	50	ENSMUST00000151429.2	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	110063806	110070402	+	110061814	110070402	A5SS	0.25	50	50	ENSMUST00000117879.8	ENSMUSG00000021699.18	Pde4d	chr13	protein_coding	phosphodiesterase 4D, cAMP specific
chr13	110397240	110417327	-	110397240	110416529	5pMXE	0.5	50	50	ENSMUST00000167824.3	ENSMUSG00000021700.11	Rab3c	chr13	protein_coding	RAB3C, member RAS oncogene family
chr13	110209938	110220664	-	110198536	110220664	A3SS	0.5	50	50	ENSMUST00000167824.3	ENSMUSG00000021700.11	Rab3c	chr13	protein_coding	RAB3C, member RAS oncogene family
chr13	110309662	110317513	-	110220788	110317513	A3SS	0.5	50	50	ENSMUST00000167824.3	ENSMUSG00000021700.11	Rab3c	chr13	protein_coding	RAB3C, member RAS oncogene family
chr13	110491049	110493618	-	110491049;110491537	110491473;110493618	ES	0.5	50	50	ENSMUST00000058806.7	ENSMUSG00000046006.7	Gapt	chr13	protein_coding	Grb2-binding adaptor, transmembrane
chr13	110768453	110775252	+	110768453	110771002	A3SS&ES	0.5	50	50	ENSMUST00000210049.2	ENSMUSG00000109853.2	Gm33045	chr13	lncRNA	predicted gene, 33045
chr13	111577350	111585467	-	111577350;111584489	111584430;111585467	ES	0.33	50	50	ENSMUST00000047627.14	ENSMUSG00000032745.19	Gpbp1	chr13	protein_coding	GC-rich promoter binding protein 1
chr13	111585533	111589907	-	111585533;111589781	111589558;111589907	ES	0.5	50	50	ENSMUST00000047627.14	ENSMUSG00000032745.19	Gpbp1	chr13	protein_coding	GC-rich promoter binding protein 1
chr13	111577350;111579940	111579855;111585467	-	111577350;111584489	111584430;111585467	MXE	0.5	100	100	ENSMUST00000047627.14	ENSMUSG00000032745.19	Gpbp1	chr13	protein_coding	GC-rich promoter binding protein 1
chr13	111577350;111579940	111579855;111585467	-	111577350	111585467	cassetteExon	0.5	100	100	ENSMUST00000091236.11	ENSMUSG00000032745.19	Gpbp1	chr13	protein_coding	GC-rich promoter binding protein 1
chr13	111603504	111686144	-	111603504	111623957	5pMXE	0.5	50	50	ENSMUST00000136471.9	ENSMUSG00000032745.19	Gpbp1	chr13	protein_coding	GC-rich promoter binding protein 1
chr13	111585533	111589907	-	111585533	111589558	A5SS	0.5	50	50	ENSMUST00000129638.2	ENSMUSG00000032745.19	Gpbp1	chr13	protein_coding	GC-rich promoter binding protein 1
chr13	111659244	111686144	-	111603504	111686144	A3SS	0.5	50	50	ENSMUST00000231096.2	ENSMUSG00000116016.2	Gm49496	chr13	protein_coding	predicted gene, 49496
chr13	111753204	111778757	+	111717510	111778757	A5SS	0.5	50	50	ENSMUST00000156236.2	ENSMUSG00000086649.2	Gm15286	chr13	lncRNA	predicted gene 15286
chr13	111840297;111840985	111840949;111841756	+	111840297	111841756	cassetteExon	0.5	100	100	ENSMUST00000231273.2	ENSMUSG00000032727.15	Mier3	chr13	protein_coding	MIER family member 3
chr13	111824386	111827770	+	111817676	111827770	A5SS	0.5	50	50	ENSMUST00000231273.2	ENSMUSG00000032727.15	Mier3	chr13	protein_coding	MIER family member 3
chr13	111824386	111840163	+	111827915	111840163	A5SS&ES	0.33	50	50	ENSMUST00000231273.2	ENSMUSG00000032727.15	Mier3	chr13	protein_coding	MIER family member 3
chr13	111837384	111840163	+	111827915	111840163	A5SS	0.33	50	50	ENSMUST00000231273.2	ENSMUSG00000032727.15	Mier3	chr13	protein_coding	MIER family member 3
chr13	111824386	111840163	+	111824386;111827915	111827770;111840163	ES	0.33	50	50	ENSMUST00000109272.9	ENSMUSG00000032727.15	Mier3	chr13	protein_coding	MIER family member 3
chr13	111846341	111848223	+	111846341	111848220	A3SS	0.5	50	50	ENSMUST00000109272.9	ENSMUSG00000032727.15	Mier3	chr13	protein_coding	MIER family member 3
chr13	111822871	111824362	+	111822888	111824362	A5SS	0.2	50	50	ENSMUST00000109272.9	ENSMUSG00000032727.15	Mier3	chr13	protein_coding	MIER family member 3
chr13	111822988	111824362	+	111822888	111824362	A5SS	0.2	50	50	ENSMUST00000109272.9	ENSMUSG00000032727.15	Mier3	chr13	protein_coding	MIER family member 3
chr13	111823443	111824362	+	111822888	111824362	A5SS	0.2	50	50	ENSMUST00000109272.9	ENSMUSG00000032727.15	Mier3	chr13	protein_coding	MIER family member 3
chr13	111824042	111824362	+	111822888	111824362	A5SS	0.2	50	50	ENSMUST00000109272.9	ENSMUSG00000032727.15	Mier3	chr13	protein_coding	MIER family member 3
chr13	111822988	111824362	+	111822871	111824362	A5SS	0.2	50	50	ENSMUST00000231979.2	ENSMUSG00000032727.15	Mier3	chr13	protein_coding	MIER family member 3
chr13	111823443	111824362	+	111822871	111824362	A5SS	0.2	50	50	ENSMUST00000231979.2	ENSMUSG00000032727.15	Mier3	chr13	protein_coding	MIER family member 3
chr13	111824042	111824362	+	111822871	111824362	A5SS	0.2	50	50	ENSMUST00000231979.2	ENSMUSG00000032727.15	Mier3	chr13	protein_coding	MIER family member 3
chr13	111824386	111840163	+	111824386	111827770	3pMXE	0.5	50	50	ENSMUST00000146726.8	ENSMUSG00000032727.15	Mier3	chr13	protein_coding	MIER family member 3
chr13	111837384	111840163	+	111824386	111840163	A5SS	0.33	50	50	ENSMUST00000232560.2	ENSMUSG00000032727.15	Mier3	chr13	protein_coding	MIER family member 3
chr13	111823443	111824362	+	111822988	111824362	A5SS	0.2	50	50	ENSMUST00000047412.11	ENSMUSG00000032727.15	Mier3	chr13	protein_coding	MIER family member 3
chr13	111824042	111824362	+	111822988	111824362	A5SS	0.2	50	50	ENSMUST00000047412.11	ENSMUSG00000032727.15	Mier3	chr13	protein_coding	MIER family member 3
chr13	111824042	111824362	+	111823443	111824362	A5SS	0.2	50	50	ENSMUST00000231713.2	ENSMUSG00000032727.15	Mier3	chr13	protein_coding	MIER family member 3
chr13	111904359	111904497	-	111900737	111904497	A3SS	0.5	50	50	ENSMUST00000109267.9	ENSMUSG00000021754.18	Map3k1	chr13	protein_coding	mitogen-activated protein kinase kinase kinase 1
chr13	111912552	111944781	-	111912552	111945037	A5SS	0.5	50	50	ENSMUST00000109267.9	ENSMUSG00000021754.18	Map3k1	chr13	protein_coding	mitogen-activated protein kinase kinase kinase 1
chr13	112472809	112485268	+	112472809	112480577	3pMXE	0.33	50	50	ENSMUST00000225329.2	ENSMUSG00000049985.16	Ankrd55	chr13	protein_coding	ankyrin repeat domain 55
chr13	112425516;112454353	112454248;112454959	+	112425516	112454959	cassetteExon	0.5	100	100	ENSMUST00000225329.2	ENSMUSG00000049985.16	Ankrd55	chr13	protein_coding	ankyrin repeat domain 55
chr13	112472809	112473598	+	112472809	112480577	A3SS	0.33	50	50	ENSMUST00000225329.2	ENSMUSG00000049985.16	Ankrd55	chr13	protein_coding	ankyrin repeat domain 55
chr13	112472809	112473598	+	112472809	112485268	A3SS	0.33	50	50	ENSMUST00000168684.2	ENSMUSG00000049985.16	Ankrd55	chr13	protein_coding	ankyrin repeat domain 55
chr13	112600784	112611565	+	112600784;112609207	112609121;112611565	ES	0.5	50	50	ENSMUST00000183663.8	ENSMUSG00000021756.13	Il6st	chr13	protein_coding	interleukin 6 signal transducer
chr13	112627176	112631113	+	112627176;112630205	112630123;112631113	ES	0.5	50	50	ENSMUST00000183663.8	ENSMUSG00000021756.13	Il6st	chr13	protein_coding	interleukin 6 signal transducer
chr13	112631323	112633819	+	112631323;112631906	112631724;112633819	ES	0.5	50	50	ENSMUST00000183663.8	ENSMUSG00000021756.13	Il6st	chr13	protein_coding	interleukin 6 signal transducer
chr13	112600784;112602460	112602261;112609121	+	112600784	112609121	cassetteExon	0.5	100	100	ENSMUST00000183663.8	ENSMUSG00000021756.13	Il6st	chr13	protein_coding	interleukin 6 signal transducer
chr13	112627176;112627720	112627678;112630123	+	112627176	112630123	cassetteExon	0.5	100	100	ENSMUST00000183663.8	ENSMUSG00000021756.13	Il6st	chr13	protein_coding	interleukin 6 signal transducer
chr13	112604209	112609121	+	112600784	112609121	A5SS	0.33	50	50	ENSMUST00000183663.8	ENSMUSG00000021756.13	Il6st	chr13	protein_coding	interleukin 6 signal transducer
chr13	112616614	112625038	+	112624403	112625038	A5SS&ES	0.5	50	50	ENSMUST00000183663.8	ENSMUSG00000021756.13	Il6st	chr13	protein_coding	interleukin 6 signal transducer
chr13	112600784	112602261	+	112600784	112611565	A3SS	0.33	50	50	ENSMUST00000184311.8	ENSMUSG00000021756.13	Il6st	chr13	protein_coding	interleukin 6 signal transducer
chr13	112604209	112609121	+	112602460	112609121	A5SS	0.33	50	50	ENSMUST00000183886.8	ENSMUSG00000021756.13	Il6st	chr13	protein_coding	interleukin 6 signal transducer
chr13	112611643	112639325	+	112611643	112616519	3pMXE	0.5	50	50	ENSMUST00000183868.8	ENSMUSG00000021756.13	Il6st	chr13	protein_coding	interleukin 6 signal transducer
chr13	112600784	112611565	+	112609207	112611565	5pMXE	0.5	50	50	ENSMUST00000184445.8	ENSMUSG00000021756.13	Il6st	chr13	protein_coding	interleukin 6 signal transducer
chr13	112627176	112627678	+	112627176	112631113	A3SS	0.33	50	50	ENSMUST00000184445.8	ENSMUSG00000021756.13	Il6st	chr13	protein_coding	interleukin 6 signal transducer
chr13	112627176	112627678	+	112627176	112639325	A3SS	0.25	50	50	ENSMUST00000183829.8	ENSMUSG00000021756.13	Il6st	chr13	protein_coding	interleukin 6 signal transducer
chr13	112627176	112630123	+	112627176	112639325	A3SS	0.25	50	50	ENSMUST00000183829.8	ENSMUSG00000021756.13	Il6st	chr13	protein_coding	interleukin 6 signal transducer
chr13	112627176	112631113	+	112627176	112639325	A3SS	0.25	50	50	ENSMUST00000183829.8	ENSMUSG00000021756.13	Il6st	chr13	protein_coding	interleukin 6 signal transducer
chr13	112637743	112639325	+	112627176	112639325	A5SS	0.33	50	50	ENSMUST00000183829.8	ENSMUSG00000021756.13	Il6st	chr13	protein_coding	interleukin 6 signal transducer
chr13	112627176	112639325	+	112611643	112639325	A5SS	0.33	50	50	ENSMUST00000183513.8	ENSMUSG00000021756.13	Il6st	chr13	protein_coding	interleukin 6 signal transducer
chr13	112637743	112639325	+	112611643	112639325	A5SS	0.33	50	50	ENSMUST00000183513.8	ENSMUSG00000021756.13	Il6st	chr13	protein_coding	interleukin 6 signal transducer
chr13	112668348;112668776	112668671;112669445	-	112668348	112669445	cassetteExon	0.5	100	100	ENSMUST00000223819.2	ENSMUSG00000050377.9	Il31ra	chr13	protein_coding	interleukin 31 receptor A
chr13	112686114;112686324	112686248;112688403	-	112686114	112688403	cassetteExon	0.5	100	100	ENSMUST00000223819.2	ENSMUSG00000050377.9	Il31ra	chr13	protein_coding	interleukin 31 receptor A
chr13	112688520;112688912	112688790;112695682	-	112688520	112695682	cassetteExon	0.5	100	100	ENSMUST00000223819.2	ENSMUSG00000050377.9	Il31ra	chr13	protein_coding	interleukin 31 receptor A
chr13	112695760	112698384	-	112695760	112727733	A5SS	0.33	50	50	ENSMUST00000223819.2	ENSMUSG00000050377.9	Il31ra	chr13	protein_coding	interleukin 31 receptor A
chr13	112695760	112702083	-	112695760	112727733	A5SS	0.33	50	50	ENSMUST00000223819.2	ENSMUSG00000050377.9	Il31ra	chr13	protein_coding	interleukin 31 receptor A
chr13	112695760	112702083	-	112695760	112698384	A5SS&ES	0.5	50	50	ENSMUST00000051756.8	ENSMUSG00000050377.9	Il31ra	chr13	protein_coding	interleukin 31 receptor A
chr13	112668348	112669445	-	112668348	112668671	5pMXE	0.5	50	50	ENSMUST00000223577.2	ENSMUSG00000050377.9	Il31ra	chr13	protein_coding	interleukin 31 receptor A
chr13	112772579;112777761	112777684;112781043	-	112772579	112781043	cassetteExon	0.5	100	100	ENSMUST00000075748.7	ENSMUSG00000021758.15	Ddx4	chr13	protein_coding	DEAD box helicase 4
chr13	112806265;112820680	112820596;112822600	+	112806265	112822600	cassetteExon	0.5	100	100	ENSMUST00000052514.6	ENSMUSG00000047789.6	Slc38a9	chr13	protein_coding	solute carrier family 38, member 9
chr13	112806265	112808394	+	112806265	112822600	A3SS	0.33	50	50	ENSMUST00000052514.6	ENSMUSG00000047789.6	Slc38a9	chr13	protein_coding	solute carrier family 38, member 9
chr13	112806265	112822600	+	112806265	112820596	3pMXE	0.33	50	50	ENSMUST00000223839.2	ENSMUSG00000047789.6	Slc38a9	chr13	protein_coding	solute carrier family 38, member 9
chr13	112806265	112808394	+	112806265	112820596	A3SS	0.33	50	50	ENSMUST00000223839.2	ENSMUSG00000047789.6	Slc38a9	chr13	protein_coding	solute carrier family 38, member 9
chr13	112937800;112988088	112987937;112993280	+	112937800;112971547	112971393;112993280	MXE	0.5	100	100	ENSMUST00000016144.12	ENSMUSG00000021759.15	Plpp1	chr13	protein_coding	phospholipid phosphatase 1
chr13	113005649;113006001	113005871;113009433	-	113005649	113009433	cassetteExon	0.5	100	100	ENSMUST00000022281.5	ENSMUSG00000016018.5	Mtrex	chr13	protein_coding	Mtr4 exosome RNA helicase
chr13	113072131	113076907	+	113072131	113076932	A3SS	0.5	50	50	ENSMUST00000224176.2	ENSMUSG00000042426.7	Dhx29	chr13	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 29
chr13	113172310	113192435	+	113172310	113174747	3pMXE	0.5	50	50	ENSMUST00000180543.8	ENSMUSG00000078926.9	Cdc20b	chr13	protein_coding	cell division cycle 20B
chr13	113171975	113172248	+	113171740	113172248	A5SS	0.5	50	50	ENSMUST00000180543.8	ENSMUSG00000078926.9	Cdc20b	chr13	protein_coding	cell division cycle 20B
chr13	113217797;113219949	113219824;113220464	+	113217797	113220464	cassetteExon	0.5	100	100	ENSMUST00000181568.8	ENSMUSG00000078926.9	Cdc20b	chr13	protein_coding	cell division cycle 20B
chr13	113220569	113227569	+	113220581	113227569	A5SS	0.5	50	50	ENSMUST00000181568.8	ENSMUSG00000078926.9	Cdc20b	chr13	protein_coding	cell division cycle 20B
chr13	113179833;113182227	113181966;113182706	-	113179833	113182706	cassetteExon	0.5	100	100	ENSMUST00000231962.2	ENSMUSG00000021760.6	Gpx8	chr13	protein_coding	glutathione peroxidase 8 (putative)
chr13	113234919	113237416	-	113234919;113237232	113237107;113237416	ES	0.5	50	50	ENSMUST00000224282.2	ENSMUSG00000023132.9	Gzma	chr13	protein_coding	granzyme A
chr13	113310598	113316969	-	113310607	113316969	A3SS	0.5	50	50	ENSMUST00000122399.8	ENSMUSG00000042385.15	Gzmk	chr13	protein_coding	granzyme K
chr13	113317116	113317371	-	113317116	113359861	A5SS	0.5	50	50	ENSMUST00000122399.8	ENSMUSG00000042385.15	Gzmk	chr13	protein_coding	granzyme K
chr13	113502801	113515934	+	113502801	113504004	3pMXE	0.5	50	50	ENSMUST00000136755.10	ENSMUSG00000021763.18	Cspg4b	chr13	protein_coding	chondroitin sulfate proteoglycan 4B
chr13	113731398	113749396	-	113731398	113753338	A5SS	0.33	50	50	ENSMUST00000109241.5	ENSMUSG00000042364.12	Snx18	chr13	protein_coding	sorting nexin 18
chr13	113731398	113749587	-	113731398	113753338	A5SS	0.33	50	50	ENSMUST00000109241.5	ENSMUSG00000042364.12	Snx18	chr13	protein_coding	sorting nexin 18
chr13	113731398;113749478	113749396;113749587	-	113731398	113749587	cassetteExon	0.5	100	100	ENSMUST00000223993.2	ENSMUSG00000042364.12	Snx18	chr13	protein_coding	sorting nexin 18
chr13	114058927	114104118	+	114058927;114070659	114070600;114104118	ES	0.5	50	50	ENSMUST00000091201.7	ENSMUSG00000042348.11	Arl15	chr13	protein_coding	ADP-ribosylation factor-like 15
chr13	113931232;114037689	114037539;114058783	+	113931232	114058783	cassetteExon	0.5	100	100	ENSMUST00000091201.7	ENSMUSG00000042348.11	Arl15	chr13	protein_coding	ADP-ribosylation factor-like 15
chr13	114425402	114453393	-	114425402;114444426	114444353;114453393	ES	0.5	50	50	ENSMUST00000022286.8	ENSMUSG00000021764.9	Ndufs4	chr13	protein_coding	NADH:ubiquinone oxidoreductase core subunit S4
chr13	114453565	114524495	-	114453565;114488062	114487984;114524495	ES	0.25	50	50	ENSMUST00000022286.8	ENSMUSG00000021764.9	Ndufs4	chr13	protein_coding	NADH:ubiquinone oxidoreductase core subunit S4
chr13	114488062;114523993	114523944;114524495	-	114488062	114524495	cassetteExon	0.5	100	100	ENSMUST00000022286.8	ENSMUSG00000021764.9	Ndufs4	chr13	protein_coding	NADH:ubiquinone oxidoreductase core subunit S4
chr13	114498081	114524495	-	114488062	114524495	A3SS	0.25	50	50	ENSMUST00000022286.8	ENSMUSG00000021764.9	Ndufs4	chr13	protein_coding	NADH:ubiquinone oxidoreductase core subunit S4
chr13	114498081	114524495	-	114523993	114524495	A3SS&ES	0.25	50	50	ENSMUST00000225707.2	ENSMUSG00000021764.9	Ndufs4	chr13	protein_coding	NADH:ubiquinone oxidoreductase core subunit S4
chr13	114498081	114524495	-	114453565	114524495	A3SS	0.25	50	50	ENSMUST00000225035.2	ENSMUSG00000021764.9	Ndufs4	chr13	protein_coding	NADH:ubiquinone oxidoreductase core subunit S4
chr13	114523993	114524495	-	114453565	114524495	A3SS	0.25	50	50	ENSMUST00000225035.2	ENSMUSG00000021764.9	Ndufs4	chr13	protein_coding	NADH:ubiquinone oxidoreductase core subunit S4
chr13	114453565	114524495	-	114488062	114524495	3pMXE	0.25	50	50	ENSMUST00000225701.2	ENSMUSG00000021764.9	Ndufs4	chr13	protein_coding	NADH:ubiquinone oxidoreductase core subunit S4
chr13	114590041	114590816	-	114590341	114590816	A3SS	0.5	50	50	ENSMUST00000223640.3	ENSMUSG00000021765.10	Fst	chr13	protein_coding	follistatin
chr13	114591043	114591657	-	114591046	114591657	A3SS	0.5	50	50	ENSMUST00000223640.3	ENSMUSG00000021765.10	Fst	chr13	protein_coding	follistatin
chr13	114748032	114819513	+	114748032	114793007	3pMXE	0.5	50	50	ENSMUST00000063230.6	ENSMUSG00000051758.7	4930544M13Rik	chr13	lncRNA	RIKEN cDNA 4930544M13 gene
chr13	114745541	114747894	+	114745541	114747937	A3SS	0.5	50	50	ENSMUST00000063230.6	ENSMUSG00000051758.7	4930544M13Rik	chr13	lncRNA	RIKEN cDNA 4930544M13 gene
chr13	114954859	114957338	+	114954859;114955993	114955872;114957338	ES	0.5	50	50	ENSMUST00000166104.9	ENSMUSG00000015536.15	Mocs2	chr13	protein_coding	molybdenum cofactor synthesis 2
chr13	114957482	114961747	+	114957482;114961230	114961103;114961747	ES	0.5	50	50	ENSMUST00000166104.9	ENSMUSG00000015536.15	Mocs2	chr13	protein_coding	molybdenum cofactor synthesis 2
chr13	114961230	114962694	+	114961230;114961897	114961747;114962694	ES	0.2	50	50	ENSMUST00000166104.9	ENSMUSG00000015536.15	Mocs2	chr13	protein_coding	molybdenum cofactor synthesis 2
chr13	114957482;114959805	114959691;114961103	+	114957482	114961103	cassetteExon	0.5	100	100	ENSMUST00000166104.9	ENSMUSG00000015536.15	Mocs2	chr13	protein_coding	molybdenum cofactor synthesis 2
chr13	114961897	114962741	+	114961897	114962694	A3SS	0.5	50	50	ENSMUST00000166104.9	ENSMUSG00000015536.15	Mocs2	chr13	protein_coding	molybdenum cofactor synthesis 2
chr13	114962817	114965014	+	114962817	114964825	A3SS	0.5	50	50	ENSMUST00000166104.9	ENSMUSG00000015536.15	Mocs2	chr13	protein_coding	molybdenum cofactor synthesis 2
chr13	114955177	114955872	+	114954859	114955872	A5SS	0.33	50	50	ENSMUST00000166104.9	ENSMUSG00000015536.15	Mocs2	chr13	protein_coding	molybdenum cofactor synthesis 2
chr13	114955544	114955872	+	114954859	114955872	A5SS	0.33	50	50	ENSMUST00000166104.9	ENSMUSG00000015536.15	Mocs2	chr13	protein_coding	molybdenum cofactor synthesis 2
chr13	114961770	114962694	+	114961897	114962694	A5SS	0.2	50	50	ENSMUST00000166104.9	ENSMUSG00000015536.15	Mocs2	chr13	protein_coding	molybdenum cofactor synthesis 2
chr13	114961801	114962694	+	114961897	114962694	A5SS	0.2	50	50	ENSMUST00000166104.9	ENSMUSG00000015536.15	Mocs2	chr13	protein_coding	molybdenum cofactor synthesis 2
chr13	114957482;114961230	114961103;114962694	+	114957482	114962694	cassetteExon	0.5	100	100	ENSMUST00000184335.8	ENSMUSG00000015536.15	Mocs2	chr13	protein_coding	molybdenum cofactor synthesis 2
chr13	114957482;114961770	114961747;114962694	+	114957482	114962694	cassetteExon	0.5	100	100	ENSMUST00000184335.8	ENSMUSG00000015536.15	Mocs2	chr13	protein_coding	molybdenum cofactor synthesis 2
chr13	114957482;114961801	114961747;114962694	+	114957482	114962694	cassetteExon	0.5	100	100	ENSMUST00000184335.8	ENSMUSG00000015536.15	Mocs2	chr13	protein_coding	molybdenum cofactor synthesis 2
chr13	114957482;114961897	114961747;114962694	+	114957482	114962694	cassetteExon	0.5	100	100	ENSMUST00000184335.8	ENSMUSG00000015536.15	Mocs2	chr13	protein_coding	molybdenum cofactor synthesis 2
chr13	114957482	114959691	+	114957482	114962694	A3SS	0.25	50	50	ENSMUST00000184335.8	ENSMUSG00000015536.15	Mocs2	chr13	protein_coding	molybdenum cofactor synthesis 2
chr13	114957482;114961230	114961103;114962694	+	114957482;114961770	114961747;114962694	MXE	0.5	100	100	ENSMUST00000184046.8	ENSMUSG00000015536.15	Mocs2	chr13	protein_coding	molybdenum cofactor synthesis 2
chr13	114957482	114959691	+	114957482	114961747	A3SS	0.25	50	50	ENSMUST00000184046.8	ENSMUSG00000015536.15	Mocs2	chr13	protein_coding	molybdenum cofactor synthesis 2
chr13	114961801	114962694	+	114961770	114962694	A5SS	0.2	50	50	ENSMUST00000184046.8	ENSMUSG00000015536.15	Mocs2	chr13	protein_coding	molybdenum cofactor synthesis 2
chr13	114957482	114962694	+	114957482	114961103	A3SS&ES	0.25	50	50	ENSMUST00000170985.8	ENSMUSG00000015536.15	Mocs2	chr13	protein_coding	molybdenum cofactor synthesis 2
chr13	114961230	114962694	+	114961230	114961747	A3SS	0.5	50	50	ENSMUST00000170985.8	ENSMUSG00000015536.15	Mocs2	chr13	protein_coding	molybdenum cofactor synthesis 2
chr13	114957482;114961801	114961747;114962694	+	114957482;114961230	114961103;114962694	MXE	0.5	100	100	ENSMUST00000184245.8	ENSMUSG00000015536.15	Mocs2	chr13	protein_coding	molybdenum cofactor synthesis 2
chr13	114957482;114961897	114961747;114962694	+	114957482;114961230	114961103;114962694	MXE	0.5	100	100	ENSMUST00000184245.8	ENSMUSG00000015536.15	Mocs2	chr13	protein_coding	molybdenum cofactor synthesis 2
chr13	114961230;114961770	114961747;114962694	+	114961230	114962694	cassetteExon	0.5	100	100	ENSMUST00000184245.8	ENSMUSG00000015536.15	Mocs2	chr13	protein_coding	molybdenum cofactor synthesis 2
chr13	114961230;114961801	114961747;114962694	+	114961230	114962694	cassetteExon	0.5	100	100	ENSMUST00000184245.8	ENSMUSG00000015536.15	Mocs2	chr13	protein_coding	molybdenum cofactor synthesis 2
chr13	114954859	114957338	+	114955993	114957338	A5SS&ES	0.5	50	50	ENSMUST00000184672.8	ENSMUSG00000015536.15	Mocs2	chr13	protein_coding	molybdenum cofactor synthesis 2
chr13	114955544	114955872	+	114955177	114955872	A5SS	0.33	50	50	ENSMUST00000184672.8	ENSMUSG00000015536.15	Mocs2	chr13	protein_coding	molybdenum cofactor synthesis 2
chr13	115037068	115038455	-	115037068	115068412	A5SS	0.5	50	50	ENSMUST00000056117.10	ENSMUSG00000015533.10	Itga2	chr13	protein_coding	integrin alpha 2
chr13	115185939;115225497	115225241;115238007	-	115185939	115238007	cassetteExon	0.5	100	100	ENSMUST00000061673.9	ENSMUSG00000042284.11	Itga1	chr13	protein_coding	integrin alpha 1
chr13	115146249	115148696	-	115143605	115148696	A3SS	0.5	50	50	ENSMUST00000061673.9	ENSMUSG00000042284.11	Itga1	chr13	protein_coding	integrin alpha 1
chr13	115226840	115238007	-	115185939	115238007	A3SS	0.25	50	50	ENSMUST00000061673.9	ENSMUSG00000042284.11	Itga1	chr13	protein_coding	integrin alpha 1
chr13	115229338	115238007	-	115185939	115238007	A3SS	0.25	50	50	ENSMUST00000061673.9	ENSMUSG00000042284.11	Itga1	chr13	protein_coding	integrin alpha 1
chr13	115225497;115229338	115229157;115238007	-	115225497	115238007	cassetteExon	0.5	100	100	ENSMUST00000224495.2	ENSMUSG00000114470.2	Gm49395	chr13	protein_coding	predicted gene, 49395
chr13	115226840	115238007	-	115225497	115238007	A3SS	0.25	50	50	ENSMUST00000224495.2	ENSMUSG00000114470.2	Gm49395	chr13	protein_coding	predicted gene, 49395
chr13	115225497	115225730	-	115225497	115238007	A5SS	0.33	50	50	ENSMUST00000224495.2	ENSMUSG00000114470.2	Gm49395	chr13	protein_coding	predicted gene, 49395
chr13	115185939	115238007	-	115225497	115238007	3pMXE	0.25	50	50	ENSMUST00000224997.2	ENSMUSG00000114470.2	Gm49395	chr13	protein_coding	predicted gene, 49395
chr13	115226840	115238007	-	115229338	115238007	A3SS&ES	0.33	50	50	ENSMUST00000225486.2	ENSMUSG00000114470.2	Gm49395	chr13	protein_coding	predicted gene, 49395
chr13	115225497	115225730	-	115225497	115229157	A5SS	0.33	50	50	ENSMUST00000225486.2	ENSMUSG00000114470.2	Gm49395	chr13	protein_coding	predicted gene, 49395
chr13	116438245	116439582	-	116438314	116439582	A3SS	0.5	50	50	ENSMUST00000036060.13	ENSMUSG00000042258.14	Isl1	chr13	protein_coding	ISL1 transcription factor, LIM/homeodomain
chr13	116442013	116442893	-	116442013	116444810	A5SS	0.5	50	50	ENSMUST00000036060.13	ENSMUSG00000042258.14	Isl1	chr13	protein_coding	ISL1 transcription factor, LIM/homeodomain
chr13	116799687	116800050	-	116799687	116799983	A5SS	0.5	50	50	ENSMUST00000224212.2	ENSMUSG00000114347.2	Gm47913	chr13	lncRNA	predicted gene, 47913
chr13	117032317	117047401	-	117032317;117039392	117039326;117047401	ES	0.33	50	50	ENSMUST00000022239.8	ENSMUSG00000021725.10	Parp8	chr13	protein_coding	poly (ADP-ribose) polymerase family, member 8
chr13	117063927	117160711	-	117063927;117075317	117075280;117160711	ES	0.5	50	50	ENSMUST00000022239.8	ENSMUSG00000021725.10	Parp8	chr13	protein_coding	poly (ADP-ribose) polymerase family, member 8
chr13	117032317	117047401	-	117029783	117047401	A3SS	0.33	50	50	ENSMUST00000225344.2	ENSMUSG00000021725.10	Parp8	chr13	protein_coding	poly (ADP-ribose) polymerase family, member 8
chr13	117039392	117047401	-	117029783	117047401	A3SS	0.33	50	50	ENSMUST00000225344.2	ENSMUSG00000021725.10	Parp8	chr13	protein_coding	poly (ADP-ribose) polymerase family, member 8
chr13	117063927	117075280	-	117047980	117075280	A3SS	0.5	50	50	ENSMUST00000225344.2	ENSMUSG00000021725.10	Parp8	chr13	protein_coding	poly (ADP-ribose) polymerase family, member 8
chr13	117063927	117160711	-	117075317	117160711	A3SS&ES	0.5	50	50	ENSMUST00000225344.2	ENSMUSG00000021725.10	Parp8	chr13	protein_coding	poly (ADP-ribose) polymerase family, member 8
chr13	117029783	117031172	-	117029783	117047401	A5SS	0.5	50	50	ENSMUST00000225344.2	ENSMUSG00000021725.10	Parp8	chr13	protein_coding	poly (ADP-ribose) polymerase family, member 8
chr13	117047980	117059106	-	117047980	117075280	A5SS	0.5	50	50	ENSMUST00000225344.2	ENSMUSG00000021725.10	Parp8	chr13	protein_coding	poly (ADP-ribose) polymerase family, member 8
chr13	117357493	117369263	+	117354354	117369263	A5SS	0.5	50	50	ENSMUST00000225981.2	ENSMUSG00000021728.9	Emb	chr13	protein_coding	embigin
chr13	117357493	117362068	+	117357493	117369263	A3SS	0.33	50	50	ENSMUST00000022242.9	ENSMUSG00000021728.9	Emb	chr13	protein_coding	embigin
chr13	117357493	117365878	+	117357493	117369263	A3SS	0.33	50	50	ENSMUST00000022242.9	ENSMUSG00000021728.9	Emb	chr13	protein_coding	embigin
chr13	117357493	117362068	+	117357493	117365878	A3SS	0.33	50	50	ENSMUST00000224821.2	ENSMUSG00000021728.9	Emb	chr13	protein_coding	embigin
chr13	117853510;117855181	117855016;117856371	-	117853510	117856371	cassetteExon	0.5	100	100	ENSMUST00000111588.9	ENSMUSG00000079048.9	4933413L06Rik	chr13	lncRNA	RIKEN cDNA 4933413L06 gene
chr13	118723758	118724574	+	118723758	118724422	A3SS	0.5	50	50	ENSMUST00000185602.7	ENSMUSG00000100727.7	1700003P14Rik	chr13	lncRNA	RIKEN cDNA 1700003P14 gene
chr13	118692755	118701529	+	118691920	118701529	A5SS	0.5	50	50	ENSMUST00000185602.7	ENSMUSG00000100727.7	1700003P14Rik	chr13	lncRNA	RIKEN cDNA 1700003P14 gene
chr13	118701675	118723708	+	118701711	118723708	A5SS	0.5	50	50	ENSMUST00000185602.7	ENSMUSG00000100727.7	1700003P14Rik	chr13	lncRNA	RIKEN cDNA 1700003P14 gene
chr13	118806491	118839731	+	118806491;118817945	118817811;118839731	ES	0.5	50	50	ENSMUST00000128103.9	ENSMUSG00000021732.15	Fgf10	chr13	protein_coding	fibroblast growth factor 10
chr13	118839795;118916797	118916676;118918042	+	118839795	118918042	cassetteExon	0.5	100	100	ENSMUST00000128103.9	ENSMUSG00000021732.15	Fgf10	chr13	protein_coding	fibroblast growth factor 10
chr13	118852247	118918042	+	118839795	118918042	A5SS	0.33	50	50	ENSMUST00000128103.9	ENSMUSG00000021732.15	Fgf10	chr13	protein_coding	fibroblast growth factor 10
chr13	118852247	118918042	+	118916797	118918042	A5SS&ES	0.33	50	50	ENSMUST00000146674.2	ENSMUSG00000021732.15	Fgf10	chr13	protein_coding	fibroblast growth factor 10
chr13	119511310	119518212	-	119506681	119518212	A3SS	0.5	50	50	ENSMUST00000069902.13	ENSMUSG00000025453.19	Nnt	chr13	protein_coding	nicotinamide nucleotide transhydrogenase
chr13	119506681	119508932	-	119506681	119518212	A5SS	0.5	50	50	ENSMUST00000069902.13	ENSMUSG00000025453.19	Nnt	chr13	protein_coding	nicotinamide nucleotide transhydrogenase
chr13	119577407	119584251	+	119577407;119582384	119582273;119584251	ES	0.5	50	50	ENSMUST00000109203.9	ENSMUSG00000025451.16	Paip1	chr13	protein_coding	polyadenylate binding protein-interacting protein 1
chr13	119582384	119586440	+	119582384;119584376	119584251;119586440	ES	0.33	50	50	ENSMUST00000109203.9	ENSMUSG00000025451.16	Paip1	chr13	protein_coding	polyadenylate binding protein-interacting protein 1
chr13	119588382	119593524	+	119588382;119592325	119592232;119593524	ES	0.5	50	50	ENSMUST00000109203.9	ENSMUSG00000025451.16	Paip1	chr13	protein_coding	polyadenylate binding protein-interacting protein 1
chr13	119565696	119566696	+	119565176	119566696	A5SS	0.33	50	50	ENSMUST00000109203.9	ENSMUSG00000025451.16	Paip1	chr13	protein_coding	polyadenylate binding protein-interacting protein 1
chr13	119565948	119566696	+	119565176	119566696	A5SS	0.33	50	50	ENSMUST00000109203.9	ENSMUSG00000025451.16	Paip1	chr13	protein_coding	polyadenylate binding protein-interacting protein 1
chr13	119584295	119586440	+	119584376	119586440	A5SS	0.33	50	50	ENSMUST00000109203.9	ENSMUSG00000025451.16	Paip1	chr13	protein_coding	polyadenylate binding protein-interacting protein 1
chr13	119565948	119566696	+	119565696	119566696	A5SS	0.33	50	50	ENSMUST00000026520.14	ENSMUSG00000025451.16	Paip1	chr13	protein_coding	polyadenylate binding protein-interacting protein 1
chr13	119577407;119582384	119582273;119586440	+	119577407;119584376	119584251;119586440	MXE	0.5	100	100	ENSMUST00000132304.10	ENSMUSG00000025451.16	Paip1	chr13	protein_coding	polyadenylate binding protein-interacting protein 1
chr13	119577407;119584295	119584251;119586440	+	119577407;119582384	119582273;119586440	MXE	0.5	100	100	ENSMUST00000174691.8	ENSMUSG00000025451.16	Paip1	chr13	protein_coding	polyadenylate binding protein-interacting protein 1
chr13	119582384;119584295	119584251;119586440	+	119582384	119586440	cassetteExon	0.5	100	100	ENSMUST00000174691.8	ENSMUSG00000025451.16	Paip1	chr13	protein_coding	polyadenylate binding protein-interacting protein 1
chr13	119599655	119601101	+	119599655	119602547	A3SS	0.33	50	50	ENSMUST00000026519.10	ENSMUSG00000062822.9	4833420G17Rik	chr13	protein_coding	RIKEN cDNA 4833420G17 gene
chr13	119599655	119602610	+	119599655	119602547	A3SS	0.33	50	50	ENSMUST00000026519.10	ENSMUSG00000062822.9	4833420G17Rik	chr13	protein_coding	RIKEN cDNA 4833420G17 gene
chr13	119610730	119611369	+	119610492	119611369	A5SS	0.5	50	50	ENSMUST00000026519.10	ENSMUSG00000062822.9	4833420G17Rik	chr13	protein_coding	RIKEN cDNA 4833420G17 gene
chr13	119599655	119602610	+	119599655;119601226	119601101;119602610	ES	0.5	50	50	ENSMUST00000225186.2	ENSMUSG00000062822.9	4833420G17Rik	chr13	protein_coding	RIKEN cDNA 4833420G17 gene
chr13	119601226	119601816	+	119601226	119602610	A3SS	0.5	50	50	ENSMUST00000225186.2	ENSMUSG00000062822.9	4833420G17Rik	chr13	protein_coding	RIKEN cDNA 4833420G17 gene
chr13	119599655	119602610	+	119599655	119601101	A3SS&ES	0.33	50	50	ENSMUST00000224312.2	ENSMUSG00000062822.9	4833420G17Rik	chr13	protein_coding	RIKEN cDNA 4833420G17 gene
chr13	119625530	119629170	+	119624736	119629170	A5SS	0.5	50	50	ENSMUST00000176171.9	ENSMUSG00000074634.13	Tmem267	chr13	protein_coding	transmembrane protein 267
chr13	119624736	119629170	+	119624736	120068185	A3SS	0.5	50	50	ENSMUST00000223912.2	ENSMUSG00000074634.13	Tmem267	chr13	protein_coding	transmembrane protein 267
chr13	119631670	120070728	+	120068566	120070728	A5SS&ES	0.5	50	50	ENSMUST00000223912.2	ENSMUSG00000074634.13	Tmem267	chr13	protein_coding	transmembrane protein 267
chr13	119624736;120068566	120068185;120070728	+	119624736;119631670	119629170;120070728	MXE	0.5	100	100	ENSMUST00000177361.3	ENSMUSG00000074634.13	Tmem267	chr13	protein_coding	transmembrane protein 267
chr13	120112155	120112401	+	120107531	120112401	A5SS	0.5	50	50	ENSMUST00000099241.4	ENSMUSG00000074715.4	Ccl28	chr13	protein_coding	chemokine (C-C motif) ligand 28
chr13	120152049	120161200	+	120152049;120156583	120156426;120161200	ES	0.5	50	50	ENSMUST00000225543.2	ENSMUSG00000093930.3	Hmgcs1	chr13	protein_coding	3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1
chr13	120152049	120156525	+	120152049	120156426	A3SS	0.33	50	50	ENSMUST00000225543.2	ENSMUSG00000093930.3	Hmgcs1	chr13	protein_coding	3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1
chr13	120152049;120156583	120156525;120161200	+	120152049	120161200	cassetteExon	0.5	100	100	ENSMUST00000179869.3	ENSMUSG00000093930.3	Hmgcs1	chr13	protein_coding	3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1
chr13	120190059	120199665	-	120190059	120217231	A5SS	0.5	50	50	ENSMUST00000178142.2	ENSMUSG00000095930.2	Nim1k	chr13	protein_coding	NIM1 serine/threonine protein kinase
chr13	120251823	120252356	-	120251823	120252315	5pMXE	0.33	50	50	ENSMUST00000177916.8	ENSMUSG00000094870.9	Zfp131	chr13	protein_coding	zinc finger protein 131
chr13	120237985;120239846	120239532;120244308	-	120237985	120244308	cassetteExon	0.5	100	100	ENSMUST00000177916.8	ENSMUSG00000094870.9	Zfp131	chr13	protein_coding	zinc finger protein 131
chr13	120237985;120239846	120239643;120244308	-	120237985	120244308	cassetteExon	0.5	100	100	ENSMUST00000177916.8	ENSMUSG00000094870.9	Zfp131	chr13	protein_coding	zinc finger protein 131
chr13	120236772	120237303	-	120230372	120237303	A3SS	0.5	50	50	ENSMUST00000177916.8	ENSMUSG00000094870.9	Zfp131	chr13	protein_coding	zinc finger protein 131
chr13	120249700	120250396	-	120244452	120250396	A3SS	0.5	50	50	ENSMUST00000177916.8	ENSMUSG00000094870.9	Zfp131	chr13	protein_coding	zinc finger protein 131
chr13	120251823	120252041	-	120251823	120252315	A5SS	0.33	50	50	ENSMUST00000177916.8	ENSMUSG00000094870.9	Zfp131	chr13	protein_coding	zinc finger protein 131
chr13	120251823	120252041	-	120251823	120252356	A5SS	0.33	50	50	ENSMUST00000223722.2	ENSMUSG00000094870.9	Zfp131	chr13	protein_coding	zinc finger protein 131
chr13	120237985	120239643	-	120237985	120239532	A5SS	0.33	50	50	ENSMUST00000225484.2	ENSMUSG00000094870.9	Zfp131	chr13	protein_coding	zinc finger protein 131
chr13	120237985	120244308	-	120237985	120239643	5pMXE	0.33	50	50	ENSMUST00000224969.2	ENSMUSG00000094870.9	Zfp131	chr13	protein_coding	zinc finger protein 131
chr14	3581430	3839265	+	3581430;3598202	3598152;3839265	ES	0.16	50	50	ENSMUST00000124353.2	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	3598202	3882698	+	3598202	3839265	3pMXE	0.2	50	50	ENSMUST00000124353.2	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	3598202;3651127	3651110;3839265	+	3598202	3839265	cassetteExon	0.5	100	100	ENSMUST00000124353.2	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	3598202;3742332	3742291;3839265	+	3598202	3839265	cassetteExon	0.5	100	100	ENSMUST00000124353.2	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	3598202;3833594	3833416;3839265	+	3598202	3839265	cassetteExon	0.5	100	100	ENSMUST00000124353.2	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	3576111	3581247	+	3575541	3581247	A5SS	0.33	50	50	ENSMUST00000124353.2	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	3576468	3581247	+	3575541	3581247	A5SS	0.33	50	50	ENSMUST00000124353.2	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	3804636	3839265	+	3598202	3839265	A5SS	0.16	50	50	ENSMUST00000124353.2	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	3598202	3882698	+	3598202;3839397	3839265;3882698	ES	0.33	50	50	ENSMUST00000150727.8	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	3839397;3872605	3872293;3882698	+	3839397	3882698	cassetteExon	0.5	100	100	ENSMUST00000150727.8	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	3576468	3581247	+	3576111	3581247	A5SS	0.33	50	50	ENSMUST00000150727.8	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	3839397	3882698	+	3839397	3872293	3pMXE	0.5	50	50	ENSMUST00000176931.8	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	3742332	3839265	+	3742332	3830981	3pMXE	0.5	50	50	ENSMUST00000176062.3	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	3598202	3651110	+	3598202	3742291	A3SS	0.5	50	50	ENSMUST00000176062.3	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	3598202;3651127	3651110;3839265	+	3598202;3833594	3833416;3839265	MXE	0.5	100	100	ENSMUST00000177398.8	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	3598202;3742332	3742291;3839265	+	3598202;3833594	3833416;3839265	MXE	0.5	100	100	ENSMUST00000177398.8	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	3804636	3839265	+	3833594	3839265	A5SS&ES	0.16	50	50	ENSMUST00000177398.8	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	3598202;3742332	3742291;3839265	+	3598202;3651127	3651110;3839265	MXE	0.5	100	100	ENSMUST00000177259.8	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	3804636	3839265	+	3651127	3839265	A5SS	0.16	50	50	ENSMUST00000177259.8	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	3581430;3839397	3839265;3882698	+	3581430;3598202	3598152;3882698	MXE	0.5	100	100	ENSMUST00000176555.8	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	3598202	3651110	+	3598202	3882698	A3SS	0.2	50	50	ENSMUST00000176555.8	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	3598202	3742291	+	3598202	3882698	A3SS	0.2	50	50	ENSMUST00000176555.8	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	3598202	3833416	+	3598202	3882698	A3SS	0.2	50	50	ENSMUST00000176555.8	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	3872605	3882698	+	3598202	3882698	A5SS	0.33	50	50	ENSMUST00000176555.8	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	3651127	3839265	+	3581430	3839265	A5SS	0.16	50	50	ENSMUST00000176843.8	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	3742332	3839265	+	3581430	3839265	A5SS	0.16	50	50	ENSMUST00000176843.8	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	3804636	3839265	+	3581430	3839265	A5SS	0.16	50	50	ENSMUST00000176843.8	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	3833594	3839265	+	3581430	3839265	A5SS	0.16	50	50	ENSMUST00000176843.8	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	3804636	3839265	+	3742332	3839265	A5SS	0.16	50	50	ENSMUST00000175643.8	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	3839397	3882698	+	3872605	3882698	5pMXE	0.33	50	50	ENSMUST00000176672.2	ENSMUSG00000058317.13	Ube2e2	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 2
chr14	4138009	4138658	+	4138009	4138562	A3SS	0.5	50	50	ENSMUST00000022296.7	ENSMUSG00000021774.14	Ube2e1	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 1
chr14	4142667	4143266	+	4138746	4143266	A5SS	0.5	50	50	ENSMUST00000022296.7	ENSMUSG00000021774.14	Ube2e1	chr14	protein_coding	ubiquitin-conjugating enzyme E2E 1
chr14	4191392;4191852	4191595;4192890	-	4191392	4192890	cassetteExon	0.5	100	100	ENSMUST00000132374.9	ENSMUSG00000021772.16	Nkiras1	chr14	protein_coding	NFKB inhibitor interacting Ras-like protein 1
chr14	4191392;4192870	4192728;4198373	-	4191392;4193000	4192890;4198373	MXE	0.5	100	100	ENSMUST00000132374.9	ENSMUSG00000021772.16	Nkiras1	chr14	protein_coding	NFKB inhibitor interacting Ras-like protein 1
chr14	4191392	4192131	-	4191392	4192890	A5SS	0.25	50	50	ENSMUST00000132374.9	ENSMUSG00000021772.16	Nkiras1	chr14	protein_coding	NFKB inhibitor interacting Ras-like protein 1
chr14	4191392;4192870	4192728;4198373	-	4191392;4193000	4191595;4198373	MXE	0.5	100	100	ENSMUST00000022294.15	ENSMUSG00000021772.16	Nkiras1	chr14	protein_coding	NFKB inhibitor interacting Ras-like protein 1
chr14	4191852;4192870	4192728;4198373	-	4191852;4193000	4192890;4198373	MXE	0.5	100	100	ENSMUST00000022294.15	ENSMUSG00000021772.16	Nkiras1	chr14	protein_coding	NFKB inhibitor interacting Ras-like protein 1
chr14	4191392	4192131	-	4191392	4191595	A5SS&ES	0.25	50	50	ENSMUST00000022294.15	ENSMUSG00000021772.16	Nkiras1	chr14	protein_coding	NFKB inhibitor interacting Ras-like protein 1
chr14	4191392;4191852	4191595;4192728	-	4191392	4192728	cassetteExon	0.5	100	100	ENSMUST00000133460.2	ENSMUSG00000021772.16	Nkiras1	chr14	protein_coding	NFKB inhibitor interacting Ras-like protein 1
chr14	4191392;4192249	4192131;4192728	-	4191392	4192728	cassetteExon	0.5	100	100	ENSMUST00000133460.2	ENSMUSG00000021772.16	Nkiras1	chr14	protein_coding	NFKB inhibitor interacting Ras-like protein 1
chr14	4192870;4193000	4192966;4198373	-	4192870	4198373	cassetteExon	0.5	100	100	ENSMUST00000133460.2	ENSMUSG00000021772.16	Nkiras1	chr14	protein_coding	NFKB inhibitor interacting Ras-like protein 1
chr14	4191392;4192249	4192131;4192728	-	4191392;4191852	4191595;4192728	MXE	0.5	100	100	ENSMUST00000156186.2	ENSMUSG00000021772.16	Nkiras1	chr14	protein_coding	NFKB inhibitor interacting Ras-like protein 1
chr14	4191392	4192890	-	4191392	4191595	A5SS&ES	0.25	50	50	ENSMUST00000156186.2	ENSMUSG00000021772.16	Nkiras1	chr14	protein_coding	NFKB inhibitor interacting Ras-like protein 1
chr14	4191852	4192890	-	4191852	4192728	A5SS&ES	0.5	50	50	ENSMUST00000156186.2	ENSMUSG00000021772.16	Nkiras1	chr14	protein_coding	NFKB inhibitor interacting Ras-like protein 1
chr14	4191392;4193000	4192890;4198373	-	4191392;4192870	4192131;4198373	MXE	0.5	100	100	ENSMUST00000150209.8	ENSMUSG00000021772.16	Nkiras1	chr14	protein_coding	NFKB inhibitor interacting Ras-like protein 1
chr14	4192870	4198373	-	4193000	4198373	A3SS	0.5	50	50	ENSMUST00000152735.2	ENSMUSG00000021772.16	Nkiras1	chr14	protein_coding	NFKB inhibitor interacting Ras-like protein 1
chr14	4198737	4199236	+	4198477	4199236	A5SS	0.25	50	50	ENSMUST00000147121.2	ENSMUSG00000012405.17	Rpl15	chr14	protein_coding	ribosomal protein L15
chr14	4198851	4199236	+	4198477	4199236	A5SS	0.25	50	50	ENSMUST00000147121.2	ENSMUSG00000012405.17	Rpl15	chr14	protein_coding	ribosomal protein L15
chr14	4198873	4199236	+	4198477	4199236	A5SS	0.25	50	50	ENSMUST00000147121.2	ENSMUSG00000012405.17	Rpl15	chr14	protein_coding	ribosomal protein L15
chr14	4198851	4199236	+	4198737	4199236	A5SS	0.25	50	50	ENSMUST00000080281.14	ENSMUSG00000012405.17	Rpl15	chr14	protein_coding	ribosomal protein L15
chr14	4198873	4199236	+	4198737	4199236	A5SS	0.25	50	50	ENSMUST00000080281.14	ENSMUSG00000012405.17	Rpl15	chr14	protein_coding	ribosomal protein L15
chr14	4198851	4199236	+	4198873	4199236	A5SS	0.25	50	50	ENSMUST00000079419.12	ENSMUSG00000012405.17	Rpl15	chr14	protein_coding	ribosomal protein L15
chr14	4230885	4247443	+	4230885	4257732	A3SS	0.5	50	50	ENSMUST00000225491.2	ENSMUSG00000021775.12	Nr1d2	chr14	protein_coding	nuclear receptor subfamily 1, group D, member 2
chr14	4254822	4257732	+	4230885	4257732	A5SS	0.5	50	50	ENSMUST00000225491.2	ENSMUSG00000021775.12	Nr1d2	chr14	protein_coding	nuclear receptor subfamily 1, group D, member 2
chr14	4467168	4506375	-	4467168	4487495	5pMXE	0.5	50	50	ENSMUST00000022304.12	ENSMUSG00000021779.20	Thrb	chr14	protein_coding	thyroid hormone receptor beta
chr14	4642802	4809062	-	4642802	4808672	5pMXE	0.33	50	50	ENSMUST00000022303.17	ENSMUSG00000021779.20	Thrb	chr14	protein_coding	thyroid hormone receptor beta
chr14	4642802	4809265	-	4642802	4808672	5pMXE	0.33	50	50	ENSMUST00000022303.17	ENSMUSG00000021779.20	Thrb	chr14	protein_coding	thyroid hormone receptor beta
chr14	4506635	4506793	-	4506635	4544037	A5SS	0.5	50	50	ENSMUST00000022303.17	ENSMUSG00000021779.20	Thrb	chr14	protein_coding	thyroid hormone receptor beta
chr14	4544100	4642728	-	4544100	4642721	A5SS	0.5	50	50	ENSMUST00000022303.17	ENSMUSG00000021779.20	Thrb	chr14	protein_coding	thyroid hormone receptor beta
chr14	4642802	4809265	-	4642802	4809062	5pMXE	0.33	50	50	ENSMUST00000224597.2	ENSMUSG00000021779.20	Thrb	chr14	protein_coding	thyroid hormone receptor beta
chr14	4519358;4528932	4528867;4537180	+	4519358	4537180	cassetteExon	0.5	100	100	ENSMUST00000224512.2	ENSMUSG00000114504.2	Gm48321	chr14	lncRNA	predicted gene, 48321
chr14	5651006	5921201	+	5651006;5851058	5850978;5921201	ES	0.25	50	50	ENSMUST00000223976.2	ENSMUSG00000017491.10	Rarb	chr14	protein_coding	retinoic acid receptor, beta
chr14	5894551	5921201	+	5851058	5921201	A5SS	0.25	50	50	ENSMUST00000223976.2	ENSMUSG00000017491.10	Rarb	chr14	protein_coding	retinoic acid receptor, beta
chr14	5894905	5921201	+	5851058	5921201	A5SS	0.25	50	50	ENSMUST00000223976.2	ENSMUSG00000017491.10	Rarb	chr14	protein_coding	retinoic acid receptor, beta
chr14	5894551	5921201	+	5651006	5921201	A5SS	0.25	50	50	ENSMUST00000225245.2	ENSMUSG00000017491.10	Rarb	chr14	protein_coding	retinoic acid receptor, beta
chr14	5894905	5921201	+	5651006	5921201	A5SS	0.25	50	50	ENSMUST00000225245.2	ENSMUSG00000017491.10	Rarb	chr14	protein_coding	retinoic acid receptor, beta
chr14	5960829;5971506	5971326;6025925	+	5960829	6025925	cassetteExon	0.5	100	100	ENSMUST00000225921.2	ENSMUSG00000017491.10	Rarb	chr14	protein_coding	retinoic acid receptor, beta
chr14	6033029	6034505	+	6033029	6034643	A3SS	0.5	50	50	ENSMUST00000225921.2	ENSMUSG00000017491.10	Rarb	chr14	protein_coding	retinoic acid receptor, beta
chr14	5894551	5921201	+	5894905	5921201	A5SS	0.25	50	50	ENSMUST00000225921.2	ENSMUSG00000017491.10	Rarb	chr14	protein_coding	retinoic acid receptor, beta
chr14	6049422	6052728	-	6049422;6051426	6051232;6052728	ES	0.5	50	50	ENSMUST00000017629.12	ENSMUSG00000017485.12	Top2b	chr14	protein_coding	topoisomerase (DNA) II beta
chr14	6053206	6056007	-	6053206;6055861	6055770;6056007	ES	0.5	50	50	ENSMUST00000017629.12	ENSMUSG00000017485.12	Top2b	chr14	protein_coding	topoisomerase (DNA) II beta
chr14	6053206;6056202	6055770;6056644	-	6053206	6056644	cassetteExon	0.5	100	100	ENSMUST00000160501.8	ENSMUSG00000017485.12	Top2b	chr14	protein_coding	topoisomerase (DNA) II beta
chr14	6053206;6056202	6056007;6056644	-	6053206	6056644	cassetteExon	0.5	100	100	ENSMUST00000160501.8	ENSMUSG00000017485.12	Top2b	chr14	protein_coding	topoisomerase (DNA) II beta
chr14	6175275	6186290	-	6175275;6178992	6178828;6186290	ES	0.5	50	50	ENSMUST00000022310.7	ENSMUSG00000021785.9	Ngly1	chr14	protein_coding	N-glycanase 1
chr14	6189070	6199123	-	6189070;6191964	6191742;6199123	ES	0.5	50	50	ENSMUST00000022310.7	ENSMUSG00000021785.9	Ngly1	chr14	protein_coding	N-glycanase 1
chr14	6199288	6215007	-	6199288;6209199	6208963;6215007	ES	0.5	50	50	ENSMUST00000022310.7	ENSMUSG00000021785.9	Ngly1	chr14	protein_coding	N-glycanase 1
chr14	6188023	6189024	-	6188023	6188949	A5SS	0.5	50	50	ENSMUST00000022310.7	ENSMUSG00000021785.9	Ngly1	chr14	protein_coding	N-glycanase 1
chr14	6199288	6215007	-	6199288	6208963	5pMXE	0.5	50	50	ENSMUST00000223973.2	ENSMUSG00000021785.9	Ngly1	chr14	protein_coding	N-glycanase 1
chr14	6220641	6226965	+	6220286	6226965	A5SS	0.25	50	50	ENSMUST00000022311.12	ENSMUSG00000021786.14	Oxsm	chr14	protein_coding	3-oxoacyl-ACP synthase, mitochondrial
chr14	6226473	6226965	+	6220286	6226965	A5SS	0.25	50	50	ENSMUST00000022311.12	ENSMUSG00000021786.14	Oxsm	chr14	protein_coding	3-oxoacyl-ACP synthase, mitochondrial
chr14	6226746	6226965	+	6220286	6226965	A5SS	0.25	50	50	ENSMUST00000022311.12	ENSMUSG00000021786.14	Oxsm	chr14	protein_coding	3-oxoacyl-ACP synthase, mitochondrial
chr14	6226473	6226965	+	6220641	6226965	A5SS	0.25	50	50	ENSMUST00000112624.3	ENSMUSG00000021786.14	Oxsm	chr14	protein_coding	3-oxoacyl-ACP synthase, mitochondrial
chr14	6226746	6226965	+	6220641	6226965	A5SS	0.25	50	50	ENSMUST00000112624.3	ENSMUSG00000021786.14	Oxsm	chr14	protein_coding	3-oxoacyl-ACP synthase, mitochondrial
chr14	6226746	6226965	+	6226473	6226965	A5SS	0.25	50	50	ENSMUST00000112625.9	ENSMUSG00000021786.14	Oxsm	chr14	protein_coding	3-oxoacyl-ACP synthase, mitochondrial
chr14	6432739;6446071	6445991;6468818	+	6432739	6468818	cassetteExon	0.5	100	100	ENSMUST00000223757.2	ENSMUSG00000114390.2	1700062C10Rik	chr14	lncRNA	RIKEN cDNA 1700062C10 gene
chr14	6465403	6468818	+	6432739	6468818	A5SS	0.33	50	50	ENSMUST00000223757.2	ENSMUSG00000114390.2	1700062C10Rik	chr14	lncRNA	RIKEN cDNA 1700062C10 gene
chr14	6446071;6465403	6465252;6468818	+	6446071	6468818	cassetteExon	0.5	100	100	ENSMUST00000223892.2	ENSMUSG00000114390.2	1700062C10Rik	chr14	lncRNA	RIKEN cDNA 1700062C10 gene
chr14	6667725	6771770	+	6667725	6671724	3pMXE	0.5	50	50	ENSMUST00000225517.2	ENSMUSG00000114794.2	Gm47782	chr14	lncRNA	predicted gene, 47782
chr14	6694658	6696847	-	6694658	6695312	5pMXE	0.5	50	50	ENSMUST00000225565.2	ENSMUSG00000114586.2	Gm31804	chr14	lncRNA	predicted gene, 31804
chr14	7020375	7029114	-	7020375	7032020	A5SS	0.5	50	50	ENSMUST00000181388.9	ENSMUSG00000097547.9	B230110C06Rik	chr14	lncRNA	RIKEN cDNA B230110C06 gene
chr14	7031803	7111002	+	7031190	7111002	A5SS	0.33	50	50	ENSMUST00000055211.6	ENSMUSG00000045201.7	Lrrc3b	chr14	protein_coding	leucine rich repeat containing 3B
chr14	7033434	7111002	+	7031190	7111002	A5SS	0.33	50	50	ENSMUST00000055211.6	ENSMUSG00000045201.7	Lrrc3b	chr14	protein_coding	leucine rich repeat containing 3B
chr14	7033434	7111002	+	7031803	7111002	A5SS	0.33	50	50	ENSMUST00000223700.2	ENSMUSG00000045201.7	Lrrc3b	chr14	protein_coding	leucine rich repeat containing 3B
chr14	7159663	7164567	+	7159663	7162129	3pMXE	0.5	50	50	ENSMUST00000225007.2	ENSMUSG00000114789.2	Gm31577	chr14	lncRNA	predicted gene, 31577
chr14	7161426	7162129	+	7159663	7162129	A5SS	0.5	50	50	ENSMUST00000225007.2	ENSMUSG00000114789.2	Gm31577	chr14	lncRNA	predicted gene, 31577
chr14	7159663;7162430	7162129;7164567	+	7159663	7164567	cassetteExon	0.5	100	100	ENSMUST00000225059.2	ENSMUSG00000114789.2	Gm31577	chr14	lncRNA	predicted gene, 31577
chr14	7414817	7420353	+	7414817	7416027	3pMXE	0.5	50	50	ENSMUST00000224074.2	ENSMUSG00000114538.2	Gm31517	chr14	lncRNA	predicted gene, 31517
chr14	7606307	7608709	-	7606307;7608212	7608075;7608709	ES	0.5	50	50	ENSMUST00000224491.2	ENSMUSG00000042567.21	Nek10	chr14	protein_coding	NIMA (never in mitosis gene a)- related kinase 10
chr14	7489248;7490907	7490875;7500251	-	7489248	7500251	cassetteExon	0.5	100	100	ENSMUST00000224491.2	ENSMUSG00000042567.21	Nek10	chr14	protein_coding	NIMA (never in mitosis gene a)- related kinase 10
chr14	7489248;7500165	7500028;7500251	-	7489248	7500251	cassetteExon	0.5	100	100	ENSMUST00000224491.2	ENSMUSG00000042567.21	Nek10	chr14	protein_coding	NIMA (never in mitosis gene a)- related kinase 10
chr14	7489248;7490907	7490875;7500251	-	7489248;7500165	7500028;7500251	MXE	0.5	100	100	ENSMUST00000136826.3	ENSMUSG00000042567.21	Nek10	chr14	protein_coding	NIMA (never in mitosis gene a)- related kinase 10
chr14	7489248	7500251	-	7500165	7500251	3pMXE	0.33	50	50	ENSMUST00000134866.2	ENSMUSG00000042567.21	Nek10	chr14	protein_coding	NIMA (never in mitosis gene a)- related kinase 10
chr14	7490907	7500251	-	7500165	7500251	3pMXE	0.33	50	50	ENSMUST00000134866.2	ENSMUSG00000042567.21	Nek10	chr14	protein_coding	NIMA (never in mitosis gene a)- related kinase 10
chr14	7673686	7678599	-	7673686;7675813	7675706;7678599	ES	0.5	50	50	ENSMUST00000224952.3	ENSMUSG00000021733.12	Slc4a7	chr14	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 7
chr14	7690937	7694711	-	7690937;7694586	7694335;7694711	ES	0.5	50	50	ENSMUST00000224952.3	ENSMUSG00000021733.12	Slc4a7	chr14	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 7
chr14	7721297	7723680	-	7721297;7722030	7721971;7723680	ES	0.5	50	50	ENSMUST00000224952.3	ENSMUSG00000021733.12	Slc4a7	chr14	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 7
chr14	7740561	7766483	-	7740561	7750873	5pMXE	0.33	50	50	ENSMUST00000224952.3	ENSMUSG00000021733.12	Slc4a7	chr14	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 7
chr14	7723795;7727349	7726975;7729850	-	7723795	7729850	cassetteExon	0.5	100	100	ENSMUST00000224952.3	ENSMUSG00000021733.12	Slc4a7	chr14	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 7
chr14	7723795;7727349	7726981;7729850	-	7723795	7729850	cassetteExon	0.5	100	100	ENSMUST00000224952.3	ENSMUSG00000021733.12	Slc4a7	chr14	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 7
chr14	7740561;7749436	7749231;7750873	-	7740561	7750873	cassetteExon	0.5	100	100	ENSMUST00000224952.3	ENSMUSG00000021733.12	Slc4a7	chr14	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 7
chr14	7678711	7683340	-	7678696	7683340	A3SS	0.5	50	50	ENSMUST00000224952.3	ENSMUSG00000021733.12	Slc4a7	chr14	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 7
chr14	7712384	7719241	-	7712478	7719241	A3SS	0.5	50	50	ENSMUST00000224952.3	ENSMUSG00000021733.12	Slc4a7	chr14	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 7
chr14	7723795	7729889	-	7723795	7729850	A5SS	0.25	50	50	ENSMUST00000224952.3	ENSMUSG00000021733.12	Slc4a7	chr14	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 7
chr14	7740561	7749231	-	7740561	7766483	A5SS	0.33	50	50	ENSMUST00000057015.8	ENSMUSG00000021733.12	Slc4a7	chr14	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 7
chr14	7723795;7727349	7726975;7729889	-	7723795	7729889	cassetteExon	0.5	100	100	ENSMUST00000224049.3	ENSMUSG00000021733.12	Slc4a7	chr14	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 7
chr14	7723795;7727349	7726981;7729889	-	7723795	7729889	cassetteExon	0.5	100	100	ENSMUST00000224049.3	ENSMUSG00000021733.12	Slc4a7	chr14	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 7
chr14	7723795	7726975	-	7723795	7726981	A5SS	0.25	50	50	ENSMUST00000224672.3	ENSMUSG00000021733.12	Slc4a7	chr14	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 7
chr14	7723795	7729850	-	7723795	7726981	A5SS&ES	0.25	50	50	ENSMUST00000224672.3	ENSMUSG00000021733.12	Slc4a7	chr14	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 7
chr14	7727349	7729850	-	7727349	7729889	A5SS	0.5	50	50	ENSMUST00000224672.3	ENSMUSG00000021733.12	Slc4a7	chr14	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 7
chr14	7723795	7729850	-	7723795	7726975	A5SS&ES	0.25	50	50	ENSMUST00000224752.3	ENSMUSG00000021733.12	Slc4a7	chr14	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 7
chr14	7723795	7729889	-	7723795	7726975	A5SS&ES	0.25	50	50	ENSMUST00000224333.3	ENSMUSG00000021733.12	Slc4a7	chr14	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 7
chr14	7723795	7729889	-	7723795	7726981	A5SS&ES	0.25	50	50	ENSMUST00000223761.3	ENSMUSG00000021733.12	Slc4a7	chr14	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 7
chr14	7690937	7694711	-	7694586	7694711	3pMXE	0.5	50	50	ENSMUST00000225496.2	ENSMUSG00000021733.12	Slc4a7	chr14	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 7
chr14	8119728	8120391	-	8114756	8120391	A3SS	0.5	50	50	ENSMUST00000223589.2	ENSMUSG00000068758.9	Il3ra	chr14	protein_coding	interleukin 3 receptor, alpha chain
chr14	8114756	8117744	-	8114756	8120391	A5SS	0.5	50	50	ENSMUST00000223589.2	ENSMUSG00000068758.9	Il3ra	chr14	protein_coding	interleukin 3 receptor, alpha chain
chr14	8122663	8123251	-	8122753	8123251	A3SS	0.33	50	50	ENSMUST00000090591.4	ENSMUSG00000068758.9	Il3ra	chr14	protein_coding	interleukin 3 receptor, alpha chain
chr14	8120520;8120942	8120819;8123251	-	8120520;8122753	8122575;8123251	MXE	0.5	100	100	ENSMUST00000224877.2	ENSMUSG00000068758.9	Il3ra	chr14	protein_coding	interleukin 3 receptor, alpha chain
chr14	8121849	8122575	-	8120520	8122575	A3SS	0.5	50	50	ENSMUST00000224877.2	ENSMUSG00000068758.9	Il3ra	chr14	protein_coding	interleukin 3 receptor, alpha chain
chr14	8120520;8122663	8122575;8123251	-	8120520;8120942	8120819;8123251	MXE	0.5	100	100	ENSMUST00000225560.2	ENSMUSG00000068758.9	Il3ra	chr14	protein_coding	interleukin 3 receptor, alpha chain
chr14	8120942	8121695	-	8120942	8123251	A5SS	0.5	50	50	ENSMUST00000225560.2	ENSMUSG00000068758.9	Il3ra	chr14	protein_coding	interleukin 3 receptor, alpha chain
chr14	8141728	8146676	-	8141728;8143008	8142832;8146676	ES	0.5	50	50	ENSMUST00000217035.2	ENSMUSG00000072707.4	Olfr31	chr14	protein_coding	olfactory receptor 31
chr14	8284475	8293668	+	8284475;8288489	8288378;8293668	ES	0.33	50	50	ENSMUST00000217642.2	ENSMUSG00000052417.7	Olfr720	chr14	protein_coding	olfactory receptor 720
chr14	8283165;8284475	8284221;8293668	+	8283165	8293668	cassetteExon	0.5	100	100	ENSMUST00000206298.3	ENSMUSG00000052417.7	Olfr720	chr14	protein_coding	olfactory receptor 720
chr14	8288489	8293668	+	8283165	8293668	A5SS	0.33	50	50	ENSMUST00000206298.3	ENSMUSG00000052417.7	Olfr720	chr14	protein_coding	olfactory receptor 720
chr14	8349776	8353170	+	8349776	8352793	A3SS&ES	0.5	50	50	ENSMUST00000022256.5	ENSMUSG00000021737.5	Psmd6	chr14	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 6
chr14	8456690	8474668	-	8456690	8457013	5pMXE	0.5	50	50	ENSMUST00000022257.4	ENSMUSG00000021738.6	Atxn7	chr14	protein_coding	ataxin 7
chr14	8366456;8368161	8368095;8368862	-	8366456	8368862	cassetteExon	0.5	100	100	ENSMUST00000022257.4	ENSMUSG00000021738.6	Atxn7	chr14	protein_coding	ataxin 7
chr14	8399451	8416740	-	8382480	8416740	A3SS	0.5	50	50	ENSMUST00000022257.4	ENSMUSG00000021738.6	Atxn7	chr14	protein_coding	ataxin 7
chr14	8433374	8456108	-	8416844	8456108	A3SS	0.5	50	50	ENSMUST00000022257.4	ENSMUSG00000021738.6	Atxn7	chr14	protein_coding	ataxin 7
chr14	8366456	8368862	-	8366456	8368095	A5SS&ES	0.5	50	50	ENSMUST00000224315.2	ENSMUSG00000021738.6	Atxn7	chr14	protein_coding	ataxin 7
chr14	8368161	8368862	-	8368161	8369746	A5SS	0.5	50	50	ENSMUST00000224315.2	ENSMUSG00000021738.6	Atxn7	chr14	protein_coding	ataxin 7
chr14	8518557	8519562	+	8518557;8519464	8519398;8519562	ES	0.5	50	50	ENSMUST00000225325.2	ENSMUSG00000053453.10	Thoc7	chr14	protein_coding	THO complex 7
chr14	8508578	8515107	+	8507969	8515107	A5SS	0.16	50	50	ENSMUST00000225325.2	ENSMUSG00000053453.10	Thoc7	chr14	protein_coding	THO complex 7
chr14	8508895	8515107	+	8507969	8515107	A5SS	0.16	50	50	ENSMUST00000225325.2	ENSMUSG00000053453.10	Thoc7	chr14	protein_coding	THO complex 7
chr14	8512209	8515107	+	8507969	8515107	A5SS	0.16	50	50	ENSMUST00000225325.2	ENSMUSG00000053453.10	Thoc7	chr14	protein_coding	THO complex 7
chr14	8512303	8515107	+	8507969	8515107	A5SS	0.16	50	50	ENSMUST00000225325.2	ENSMUSG00000053453.10	Thoc7	chr14	protein_coding	THO complex 7
chr14	8512701	8515107	+	8507969	8515107	A5SS	0.16	50	50	ENSMUST00000225325.2	ENSMUSG00000053453.10	Thoc7	chr14	protein_coding	THO complex 7
chr14	8515197	8516225	+	8515224	8516225	A5SS	0.5	50	50	ENSMUST00000225325.2	ENSMUSG00000053453.10	Thoc7	chr14	protein_coding	THO complex 7
chr14	8508578;8512209	8512132;8515107	+	8508578	8515107	cassetteExon	0.5	100	100	ENSMUST00000065865.10	ENSMUSG00000053453.10	Thoc7	chr14	protein_coding	THO complex 7
chr14	8508578;8512303	8512132;8515107	+	8508578	8515107	cassetteExon	0.5	100	100	ENSMUST00000065865.10	ENSMUSG00000053453.10	Thoc7	chr14	protein_coding	THO complex 7
chr14	8508895	8515107	+	8508578	8515107	A5SS	0.16	50	50	ENSMUST00000065865.10	ENSMUSG00000053453.10	Thoc7	chr14	protein_coding	THO complex 7
chr14	8512701	8515107	+	8508578	8515107	A5SS	0.16	50	50	ENSMUST00000065865.10	ENSMUSG00000053453.10	Thoc7	chr14	protein_coding	THO complex 7
chr14	8508895	8515107	+	8512209	8515107	A5SS&ES	0.2	50	50	ENSMUST00000225401.2	ENSMUSG00000053453.10	Thoc7	chr14	protein_coding	THO complex 7
chr14	8512303	8515107	+	8512209	8515107	A5SS	0.2	50	50	ENSMUST00000225401.2	ENSMUSG00000053453.10	Thoc7	chr14	protein_coding	THO complex 7
chr14	8512701	8515107	+	8512209	8515107	A5SS	0.2	50	50	ENSMUST00000225401.2	ENSMUSG00000053453.10	Thoc7	chr14	protein_coding	THO complex 7
chr14	8508895	8515107	+	8512303	8515107	A5SS&ES	0.2	50	50	ENSMUST00000225202.2	ENSMUSG00000053453.10	Thoc7	chr14	protein_coding	THO complex 7
chr14	8512701	8515107	+	8512303	8515107	A5SS	0.2	50	50	ENSMUST00000225202.2	ENSMUSG00000053453.10	Thoc7	chr14	protein_coding	THO complex 7
chr14	8518557	8519562	+	8518557	8519398	3pMXE	0.5	50	50	ENSMUST00000225590.2	ENSMUSG00000053453.10	Thoc7	chr14	protein_coding	THO complex 7
chr14	8512701	8515107	+	8508895	8515107	A5SS	0.16	50	50	ENSMUST00000225590.2	ENSMUSG00000053453.10	Thoc7	chr14	protein_coding	THO complex 7
chr14	8508578	8515107	+	8512303	8515107	5pMXE	0.16	50	50	ENSMUST00000226008.2	ENSMUSG00000053453.10	Thoc7	chr14	protein_coding	THO complex 7
chr14	8526212	8536687	-	8526212	8547904	A5SS	0.33	50	50	ENSMUST00000112652.9	ENSMUSG00000079357.10	Gm11100	chr14	protein_coding	predicted gene 11100
chr14	8526212	8536962	-	8526212	8547904	A5SS	0.33	50	50	ENSMUST00000112652.9	ENSMUSG00000079357.10	Gm11100	chr14	protein_coding	predicted gene 11100
chr14	8526212	8536687	-	8526212	8536962	A5SS	0.33	50	50	ENSMUST00000159275.4	ENSMUSG00000079357.10	Gm11100	chr14	protein_coding	predicted gene 11100
chr14	8906845	8976131	-	8906845;8944815	8944717;8976131	ES	0.5	50	50	ENSMUST00000223583.2	ENSMUSG00000056296.18	Synpr	chr14	protein_coding	synaptoporin
chr14	8976255	9140042	-	8976255	9043897	5pMXE	0.25	50	50	ENSMUST00000223583.2	ENSMUSG00000056296.18	Synpr	chr14	protein_coding	synaptoporin
chr14	8976255	9184557	-	8976255	9043897	5pMXE	0.25	50	50	ENSMUST00000223583.2	ENSMUSG00000056296.18	Synpr	chr14	protein_coding	synaptoporin
chr14	8976255	9015411	-	8976255	9043897	A5SS	0.25	50	50	ENSMUST00000223583.2	ENSMUSG00000056296.18	Synpr	chr14	protein_coding	synaptoporin
chr14	8976255	9140042	-	8976255	9015411	5pMXE	0.25	50	50	ENSMUST00000112656.4	ENSMUSG00000056296.18	Synpr	chr14	protein_coding	synaptoporin
chr14	8976255	9184557	-	8976255	9015411	5pMXE	0.25	50	50	ENSMUST00000112656.4	ENSMUSG00000056296.18	Synpr	chr14	protein_coding	synaptoporin
chr14	8906845	9184557	-	8906845;8976255	8976131;9184557	ES	0.33	50	50	ENSMUST00000070323.12	ENSMUSG00000056296.18	Synpr	chr14	protein_coding	synaptoporin
chr14	8976255;9140097	9140042;9184557	-	8976255	9184557	cassetteExon	0.5	100	100	ENSMUST00000070323.12	ENSMUSG00000056296.18	Synpr	chr14	protein_coding	synaptoporin
chr14	9184622	9184887	-	9184622	9184761	A5SS	0.5	50	50	ENSMUST00000070323.12	ENSMUSG00000056296.18	Synpr	chr14	protein_coding	synaptoporin
chr14	9140097	9184557	-	8906845	9184557	A3SS	0.33	50	50	ENSMUST00000226094.2	ENSMUSG00000056296.18	Synpr	chr14	protein_coding	synaptoporin
chr14	8906845	8944717	-	8906845	9184557	A5SS	0.33	50	50	ENSMUST00000226094.2	ENSMUSG00000056296.18	Synpr	chr14	protein_coding	synaptoporin
chr14	9185251	9198372	+	9185251	9205737	A3SS	0.5	50	50	ENSMUST00000060526.11	ENSMUSG00000051729.13	Gm5087	chr14	lncRNA	predicted gene 5087
chr14	9205753	9206021	+	9205753	9299084	A3SS	0.5	50	50	ENSMUST00000060526.11	ENSMUSG00000051729.13	Gm5087	chr14	lncRNA	predicted gene 5087
chr14	9204883	9205737	+	9185251	9205737	A5SS	0.5	50	50	ENSMUST00000060526.11	ENSMUSG00000051729.13	Gm5087	chr14	lncRNA	predicted gene 5087
chr14	9299190	9310691	+	9299175	9310691	A5SS	0.5	50	50	ENSMUST00000060526.11	ENSMUSG00000051729.13	Gm5087	chr14	lncRNA	predicted gene 5087
chr14	9947560	9960531	+	9947560;9951959	9951948;9960531	ES	0.5	50	50	ENSMUST00000112658.8	ENSMUSG00000054423.15	Cadps	chr14	protein_coding	Ca2+-dependent secretion activator
chr14	9980782	9996248	+	9980782;9984122	9984105;9996248	ES	0.25	50	50	ENSMUST00000112658.8	ENSMUSG00000054423.15	Cadps	chr14	protein_coding	Ca2+-dependent secretion activator
chr14	9996354	10002584	+	9996354;10001417	10001397;10002584	ES	0.5	50	50	ENSMUST00000112658.8	ENSMUSG00000054423.15	Cadps	chr14	protein_coding	Ca2+-dependent secretion activator
chr14	10003904	10015444	+	10003904;10012080	10011934;10015444	ES	0.5	50	50	ENSMUST00000112658.8	ENSMUSG00000054423.15	Cadps	chr14	protein_coding	Ca2+-dependent secretion activator
chr14	9963979;9966513	9966355;9977900	+	9963979	9977900	cassetteExon	0.5	100	100	ENSMUST00000112658.8	ENSMUSG00000054423.15	Cadps	chr14	protein_coding	Ca2+-dependent secretion activator
chr14	9980782;9980879	9980862;9996248	+	9980782;9984122	9984105;9996248	MXE	0.5	100	100	ENSMUST00000112658.8	ENSMUSG00000054423.15	Cadps	chr14	protein_coding	Ca2+-dependent secretion activator
chr14	9980782;9983238	9983170;9984105	+	9980782	9984105	cassetteExon	0.5	100	100	ENSMUST00000112658.8	ENSMUSG00000054423.15	Cadps	chr14	protein_coding	Ca2+-dependent secretion activator
chr14	9980782;9983238	9983170;9996248	+	9980782;9984122	9984105;9996248	MXE	0.5	100	100	ENSMUST00000112658.8	ENSMUSG00000054423.15	Cadps	chr14	protein_coding	Ca2+-dependent secretion activator
chr14	9947560	9947615	+	9947560	9951948	A3SS	0.25	50	50	ENSMUST00000112658.8	ENSMUSG00000054423.15	Cadps	chr14	protein_coding	Ca2+-dependent secretion activator
chr14	9947560	9960517	+	9947560	9951948	A3SS&ES	0.25	50	50	ENSMUST00000112658.8	ENSMUSG00000054423.15	Cadps	chr14	protein_coding	Ca2+-dependent secretion activator
chr14	10029892	10034430	+	10029892	10051726	A3SS	0.5	50	50	ENSMUST00000112658.8	ENSMUSG00000054423.15	Cadps	chr14	protein_coding	Ca2+-dependent secretion activator
chr14	9928874	9933376	+	9923479	9933376	A5SS	0.5	50	50	ENSMUST00000112658.8	ENSMUSG00000054423.15	Cadps	chr14	protein_coding	Ca2+-dependent secretion activator
chr14	10063814	10093054	+	10058209	10093054	A5SS	0.33	50	50	ENSMUST00000112658.8	ENSMUSG00000054423.15	Cadps	chr14	protein_coding	Ca2+-dependent secretion activator
chr14	10092905	10093054	+	10058209	10093054	A5SS	0.33	50	50	ENSMUST00000112658.8	ENSMUSG00000054423.15	Cadps	chr14	protein_coding	Ca2+-dependent secretion activator
chr14	9947560	9947615	+	9947560	9960517	A3SS	0.25	50	50	ENSMUST00000112657.9	ENSMUSG00000054423.15	Cadps	chr14	protein_coding	Ca2+-dependent secretion activator
chr14	9947560	9960531	+	9947560	9960517	A3SS&ES	0.25	50	50	ENSMUST00000112657.9	ENSMUSG00000054423.15	Cadps	chr14	protein_coding	Ca2+-dependent secretion activator
chr14	9980782	9996248	+	9980782;9980879	9980862;9996248	ES	0.25	50	50	ENSMUST00000177814.2	ENSMUSG00000054423.15	Cadps	chr14	protein_coding	Ca2+-dependent secretion activator
chr14	9980782;9983238	9983170;9996248	+	9980782;9980879	9980862;9996248	MXE	0.5	100	100	ENSMUST00000177814.2	ENSMUSG00000054423.15	Cadps	chr14	protein_coding	Ca2+-dependent secretion activator
chr14	9947560	9960531	+	9947560	9947615	A3SS&ES	0.25	50	50	ENSMUST00000177814.2	ENSMUSG00000054423.15	Cadps	chr14	protein_coding	Ca2+-dependent secretion activator
chr14	9983238	9996248	+	9983238;9984122	9984105;9996248	ES	0.25	50	50	ENSMUST00000224882.2	ENSMUSG00000054423.15	Cadps	chr14	protein_coding	Ca2+-dependent secretion activator
chr14	9980782	9984105	+	9983238	9984105	A5SS	0.5	50	50	ENSMUST00000224882.2	ENSMUSG00000054423.15	Cadps	chr14	protein_coding	Ca2+-dependent secretion activator
chr14	9980782	9996248	+	9984122	9996248	A5SS&ES	0.25	50	50	ENSMUST00000224882.2	ENSMUSG00000054423.15	Cadps	chr14	protein_coding	Ca2+-dependent secretion activator
chr14	9980879	9996248	+	9984122	9996248	A5SS&ES	0.25	50	50	ENSMUST00000224882.2	ENSMUSG00000054423.15	Cadps	chr14	protein_coding	Ca2+-dependent secretion activator
chr14	9980782	9996248	+	9980782;9983238	9983170;9996248	ES	0.25	50	50	ENSMUST00000067491.14	ENSMUSG00000054423.15	Cadps	chr14	protein_coding	Ca2+-dependent secretion activator
chr14	9980782;9980879	9980862;9996248	+	9980782;9984122	9983170;9996248	MXE	0.5	100	100	ENSMUST00000224106.2	ENSMUSG00000054423.15	Cadps	chr14	protein_coding	Ca2+-dependent secretion activator
chr14	10092905	10093054	+	10063814	10093054	A5SS	0.33	50	50	ENSMUST00000225807.2	ENSMUSG00000054423.15	Cadps	chr14	protein_coding	Ca2+-dependent secretion activator
chr14	10172181	10182370	-	10172181;10173141	10173016;10182370	ES	0.2	50	50	ENSMUST00000225871.2	ENSMUSG00000114378.2	Gm49355	chr14	protein_coding	predicted gene, 49355
chr14	10168615;10170041	10169981;10172107	-	10168615	10172107	cassetteExon	0.5	100	100	ENSMUST00000225871.2	ENSMUSG00000114378.2	Gm49355	chr14	protein_coding	predicted gene, 49355
chr14	10182493;10184375	10184295;10185506	-	10182493	10185506	cassetteExon	0.5	100	100	ENSMUST00000225871.2	ENSMUSG00000114378.2	Gm49355	chr14	protein_coding	predicted gene, 49355
chr14	10182493;10184378	10184295;10185506	-	10182493	10185506	cassetteExon	0.5	100	100	ENSMUST00000225871.2	ENSMUSG00000114378.2	Gm49355	chr14	protein_coding	predicted gene, 49355
chr14	10168364	10168517	-	10162639	10168517	A3SS	0.5	50	50	ENSMUST00000225871.2	ENSMUSG00000114378.2	Gm49355	chr14	protein_coding	predicted gene, 49355
chr14	10168590	10182370	-	10173141	10182370	A3SS&ES	0.2	50	50	ENSMUST00000225871.2	ENSMUSG00000114378.2	Gm49355	chr14	protein_coding	predicted gene, 49355
chr14	10172127	10182370	-	10173141	10182370	A3SS&ES	0.2	50	50	ENSMUST00000225871.2	ENSMUSG00000114378.2	Gm49355	chr14	protein_coding	predicted gene, 49355
chr14	10173201	10182370	-	10173141	10182370	A3SS	0.2	50	50	ENSMUST00000225871.2	ENSMUSG00000114378.2	Gm49355	chr14	protein_coding	predicted gene, 49355
chr14	10182493	10185216	-	10182493	10185506	A5SS	0.25	50	50	ENSMUST00000225871.2	ENSMUSG00000114378.2	Gm49355	chr14	protein_coding	predicted gene, 49355
chr14	10182493	10185430	-	10182493	10185506	A5SS	0.25	50	50	ENSMUST00000225871.2	ENSMUSG00000114378.2	Gm49355	chr14	protein_coding	predicted gene, 49355
chr14	10182493	10185430	-	10182493;10184375	10184295;10185430	ES	0.33	50	50	ENSMUST00000224389.2	ENSMUSG00000033111.17	3830406C13Rik	chr14	protein_coding	RIKEN cDNA 3830406C13 gene
chr14	10172181;10173201	10173016;10182370	-	10172181	10182370	cassetteExon	0.5	100	100	ENSMUST00000224389.2	ENSMUSG00000033111.17	3830406C13Rik	chr14	protein_coding	RIKEN cDNA 3830406C13 gene
chr14	10168590	10182370	-	10172181	10182370	A3SS&ES	0.2	50	50	ENSMUST00000224389.2	ENSMUSG00000033111.17	3830406C13Rik	chr14	protein_coding	RIKEN cDNA 3830406C13 gene
chr14	10172127	10182370	-	10172181	10182370	A3SS	0.2	50	50	ENSMUST00000224389.2	ENSMUSG00000033111.17	3830406C13Rik	chr14	protein_coding	RIKEN cDNA 3830406C13 gene
chr14	10184378	10185430	-	10184375	10185430	A3SS	0.33	50	50	ENSMUST00000224389.2	ENSMUSG00000033111.17	3830406C13Rik	chr14	protein_coding	RIKEN cDNA 3830406C13 gene
chr14	10182493	10185216	-	10182493	10184295	A5SS&ES	0.25	50	50	ENSMUST00000224389.2	ENSMUSG00000033111.17	3830406C13Rik	chr14	protein_coding	RIKEN cDNA 3830406C13 gene
chr14	10182493	10185506	-	10182493	10184295	A5SS&ES	0.25	50	50	ENSMUST00000224389.2	ENSMUSG00000033111.17	3830406C13Rik	chr14	protein_coding	RIKEN cDNA 3830406C13 gene
chr14	10184375	10185506	-	10184375	10185430	A5SS	0.5	50	50	ENSMUST00000224389.2	ENSMUSG00000033111.17	3830406C13Rik	chr14	protein_coding	RIKEN cDNA 3830406C13 gene
chr14	10184375	10185506	-	10184378	10185506	A3SS	0.33	50	50	ENSMUST00000112669.10	ENSMUSG00000033111.17	3830406C13Rik	chr14	protein_coding	RIKEN cDNA 3830406C13 gene
chr14	10182493	10185430	-	10182493	10184295	A5SS&ES	0.25	50	50	ENSMUST00000112669.10	ENSMUSG00000033111.17	3830406C13Rik	chr14	protein_coding	RIKEN cDNA 3830406C13 gene
chr14	10184378	10185216	-	10184378	10185506	A5SS	0.33	50	50	ENSMUST00000112669.10	ENSMUSG00000033111.17	3830406C13Rik	chr14	protein_coding	RIKEN cDNA 3830406C13 gene
chr14	10184378	10185430	-	10184378	10185506	A5SS	0.33	50	50	ENSMUST00000112669.10	ENSMUSG00000033111.17	3830406C13Rik	chr14	protein_coding	RIKEN cDNA 3830406C13 gene
chr14	10168191	10168275	-	10168180	10168275	A3SS	0.5	50	50	ENSMUST00000225847.2	ENSMUSG00000033111.17	3830406C13Rik	chr14	protein_coding	RIKEN cDNA 3830406C13 gene
chr14	10182493;10184378	10184295;10185430	-	10182493	10185430	cassetteExon	0.5	100	100	ENSMUST00000223702.2	ENSMUSG00000033111.17	3830406C13Rik	chr14	protein_coding	RIKEN cDNA 3830406C13 gene
chr14	10182493	10185216	-	10182493	10185430	A5SS	0.25	50	50	ENSMUST00000223702.2	ENSMUSG00000033111.17	3830406C13Rik	chr14	protein_coding	RIKEN cDNA 3830406C13 gene
chr14	10184378	10185216	-	10184378	10185430	A5SS	0.33	50	50	ENSMUST00000225294.2	ENSMUSG00000033111.17	3830406C13Rik	chr14	protein_coding	RIKEN cDNA 3830406C13 gene
chr14	10172127	10182370	-	10168590	10182370	A3SS	0.2	50	50	ENSMUST00000224824.2	ENSMUSG00000033111.17	3830406C13Rik	chr14	protein_coding	RIKEN cDNA 3830406C13 gene
chr14	10173201	10182370	-	10168590	10182370	A3SS	0.2	50	50	ENSMUST00000224824.2	ENSMUSG00000033111.17	3830406C13Rik	chr14	protein_coding	RIKEN cDNA 3830406C13 gene
chr14	10173201	10182370	-	10172127	10182370	A3SS	0.2	50	50	ENSMUST00000225773.2	ENSMUSG00000033111.17	3830406C13Rik	chr14	protein_coding	RIKEN cDNA 3830406C13 gene
chr14	10172181	10182370	-	10173201	10182370	3pMXE	0.2	50	50	ENSMUST00000224994.2	ENSMUSG00000033111.17	3830406C13Rik	chr14	protein_coding	RIKEN cDNA 3830406C13 gene
chr14	10182493	10185216	-	10182493;10184378	10184295;10185216	ES	0.5	50	50	ENSMUST00000225640.2	ENSMUSG00000033111.17	3830406C13Rik	chr14	protein_coding	RIKEN cDNA 3830406C13 gene
chr14	11289999	11307537	-	11289999;11298747	11298690;11307537	ES	0.5	50	50	ENSMUST00000223928.2	ENSMUSG00000089785.3	Slc25a5-ps	chr14	transcribed_processed_pseudogene	Slc25a5 retrotransposed pseudogene
chr14	11344226;11740048	11739978;12048160	+	11344226;11459882	11459817;12048160	MXE	0.5	100	100	ENSMUST00000160956.2	ENSMUSG00000060579.14	Fhit	chr14	protein_coding	fragile histidine triad gene
chr14	11459882;11740048	11739978;12048160	+	11459882	12048160	cassetteExon	0.5	100	100	ENSMUST00000160956.2	ENSMUSG00000060579.14	Fhit	chr14	protein_coding	fragile histidine triad gene
chr14	11344226	11478177	+	11344226	11459817	A3SS&ES	0.25	50	50	ENSMUST00000160956.2	ENSMUSG00000060579.14	Fhit	chr14	protein_coding	fragile histidine triad gene
chr14	11344226	11718079	+	11344226	11459817	A3SS&ES	0.25	50	50	ENSMUST00000160956.2	ENSMUSG00000060579.14	Fhit	chr14	protein_coding	fragile histidine triad gene
chr14	12016404	12048160	+	11459882	12048160	A5SS	0.33	50	50	ENSMUST00000160956.2	ENSMUSG00000060579.14	Fhit	chr14	protein_coding	fragile histidine triad gene
chr14	11344226	11739978	+	11344226;11718188	11718079;11739978	ES	0.2	50	50	ENSMUST00000160340.8	ENSMUSG00000060579.14	Fhit	chr14	protein_coding	fragile histidine triad gene
chr14	11344226;11459882	11459817;11739978	+	11344226;11718188	11718079;11739978	MXE	0.5	100	100	ENSMUST00000160340.8	ENSMUSG00000060579.14	Fhit	chr14	protein_coding	fragile histidine triad gene
chr14	11344226;11459882	11459817;12048160	+	11344226;11740048	11718079;12048160	MXE	0.5	100	100	ENSMUST00000160340.8	ENSMUSG00000060579.14	Fhit	chr14	protein_coding	fragile histidine triad gene
chr14	11344226;11478291	11478177;11739978	+	11344226;11718188	11718079;11739978	MXE	0.5	100	100	ENSMUST00000160340.8	ENSMUSG00000060579.14	Fhit	chr14	protein_coding	fragile histidine triad gene
chr14	11344651	11739978	+	11718188	11739978	A5SS&ES	0.2	50	50	ENSMUST00000160340.8	ENSMUSG00000060579.14	Fhit	chr14	protein_coding	fragile histidine triad gene
chr14	12016404	12048160	+	11740048	12048160	A5SS	0.33	50	50	ENSMUST00000160340.8	ENSMUSG00000060579.14	Fhit	chr14	protein_coding	fragile histidine triad gene
chr14	11344226;11459882	11459817;11739978	+	11344226	11739978	cassetteExon	0.5	100	100	ENSMUST00000162278.8	ENSMUSG00000060579.14	Fhit	chr14	protein_coding	fragile histidine triad gene
chr14	11344226;11478291	11478177;11739978	+	11344226	11739978	cassetteExon	0.5	100	100	ENSMUST00000162278.8	ENSMUSG00000060579.14	Fhit	chr14	protein_coding	fragile histidine triad gene
chr14	11344651	11739978	+	11344226	11739978	A5SS	0.2	50	50	ENSMUST00000162278.8	ENSMUSG00000060579.14	Fhit	chr14	protein_coding	fragile histidine triad gene
chr14	11344226;11478291	11478177;11739978	+	11344226;11459882	11459817;11739978	MXE	0.5	100	100	ENSMUST00000161895.8	ENSMUSG00000060579.14	Fhit	chr14	protein_coding	fragile histidine triad gene
chr14	11344651	11739978	+	11459882	11739978	A5SS&ES	0.2	50	50	ENSMUST00000161895.8	ENSMUSG00000060579.14	Fhit	chr14	protein_coding	fragile histidine triad gene
chr14	11344226;11459882	11459817;12048160	+	11344226;11740048	11478177;12048160	MXE	0.5	100	100	ENSMUST00000162817.3	ENSMUSG00000060579.14	Fhit	chr14	protein_coding	fragile histidine triad gene
chr14	11344651	11739978	+	11478291	11739978	A5SS&ES	0.2	50	50	ENSMUST00000162817.3	ENSMUSG00000060579.14	Fhit	chr14	protein_coding	fragile histidine triad gene
chr14	11459882	12048160	+	11740048	12048160	A5SS&ES	0.33	50	50	ENSMUST00000161179.2	ENSMUSG00000060579.14	Fhit	chr14	protein_coding	fragile histidine triad gene
chr14	11692784;11710034	11709953;11730851	-	11692784	11730851	cassetteExon	0.5	100	100	ENSMUST00000226067.2	ENSMUSG00000089833.3	Fhitos	chr14	lncRNA	fragile histidine triad gene, opposite strand
chr14	13796942	13800361	-	13796942;13798132	13798028;13800361	ES	0.33	50	50	ENSMUST00000181914.8	ENSMUSG00000097898.9	4930455B14Rik	chr14	lncRNA	RIKEN cDNA 4930455B14 gene
chr14	13798132;13798705	13798596;13800361	-	13798132	13800361	cassetteExon	0.5	100	100	ENSMUST00000181914.8	ENSMUSG00000097898.9	4930455B14Rik	chr14	lncRNA	RIKEN cDNA 4930455B14 gene
chr14	13800481;13802327	13802002;13802762	-	13800481	13802762	cassetteExon	0.5	100	100	ENSMUST00000181914.8	ENSMUSG00000097898.9	4930455B14Rik	chr14	lncRNA	RIKEN cDNA 4930455B14 gene
chr14	13798705	13800361	-	13796942	13800361	A3SS	0.33	50	50	ENSMUST00000180444.2	ENSMUSG00000097898.9	4930455B14Rik	chr14	lncRNA	RIKEN cDNA 4930455B14 gene
chr14	13958911	13966755	+	13958911	13987153	A3SS	0.5	50	50	ENSMUST00000102996.4	ENSMUSG00000021747.13	Cfap20dc	chr14	protein_coding	CFAP20 domain containing
chr14	14091216;14092855	14092540;14102684	+	14091216	14102684	cassetteExon	0.5	100	100	ENSMUST00000022269.7	ENSMUSG00000021749.7	Oit1	chr14	protein_coding	oncoprotein induced transcript 1
chr14	14160134	14168540	+	14152268	14168540	A5SS	0.25	50	50	ENSMUST00000120411.9	ENSMUSG00000021750.17	Fam107a	chr14	protein_coding	family with sequence similarity 107, member A
chr14	14160288	14168540	+	14152268	14168540	A5SS	0.25	50	50	ENSMUST00000120411.9	ENSMUSG00000021750.17	Fam107a	chr14	protein_coding	family with sequence similarity 107, member A
chr14	14168420	14168540	+	14152268	14168540	A5SS	0.25	50	50	ENSMUST00000120411.9	ENSMUSG00000021750.17	Fam107a	chr14	protein_coding	family with sequence similarity 107, member A
chr14	14160288	14168540	+	14160134	14168540	A5SS	0.25	50	50	ENSMUST00000137133.2	ENSMUSG00000021750.17	Fam107a	chr14	protein_coding	family with sequence similarity 107, member A
chr14	14168420	14168540	+	14160134	14168540	A5SS	0.25	50	50	ENSMUST00000137133.2	ENSMUSG00000021750.17	Fam107a	chr14	protein_coding	family with sequence similarity 107, member A
chr14	14160288;14168420	14168237;14168540	+	14160288	14168540	cassetteExon	0.5	100	100	ENSMUST00000036070.15	ENSMUSG00000021750.17	Fam107a	chr14	protein_coding	family with sequence similarity 107, member A
chr14	14213778	14214472	+	14213778;14214118	14213967;14214472	ES	0.5	50	50	ENSMUST00000164598.8	ENSMUSG00000021751.14	Acox2	chr14	protein_coding	acyl-Coenzyme A oxidase 2, branched chain
chr14	14228512	14230209	+	14228512	14239482	A3SS	0.5	50	50	ENSMUST00000164598.8	ENSMUSG00000021751.14	Acox2	chr14	protein_coding	acyl-Coenzyme A oxidase 2, branched chain
chr14	14211006	14212838	+	14210951	14212838	A5SS	0.33	50	50	ENSMUST00000164598.8	ENSMUSG00000021751.14	Acox2	chr14	protein_coding	acyl-Coenzyme A oxidase 2, branched chain
chr14	14211934	14212838	+	14210951	14212838	A5SS	0.33	50	50	ENSMUST00000164598.8	ENSMUSG00000021751.14	Acox2	chr14	protein_coding	acyl-Coenzyme A oxidase 2, branched chain
chr14	14211934	14212838	+	14211006	14212838	A5SS	0.33	50	50	ENSMUST00000022271.14	ENSMUSG00000021751.14	Acox2	chr14	protein_coding	acyl-Coenzyme A oxidase 2, branched chain
chr14	14249622	14254272	-	14249622	14255431	A5SS	0.5	50	50	ENSMUST00000022272.14	ENSMUSG00000021752.15	Kctd6	chr14	protein_coding	potassium channel tetramerisation domain containing 6
chr14	14298633	14299954	+	14298633;14299612	14299327;14299954	ES	0.5	50	50	ENSMUST00000022268.10	ENSMUSG00000021748.10	Pdhb	chr14	protein_coding	pyruvate dehydrogenase (lipoamide) beta
chr14	14305838;14309774	14309742;14314428	-	14305838	14314428	cassetteExon	0.5	100	100	ENSMUST00000036682.9	ENSMUSG00000033885.16	Pxk	chr14	protein_coding	PX domain containing serine/threonine kinase
chr14	14314490	14317623	-	14314487	14317623	A3SS	0.5	50	50	ENSMUST00000036682.9	ENSMUSG00000033885.16	Pxk	chr14	protein_coding	PX domain containing serine/threonine kinase
chr14	14332904	14334275	-	14332904	14338983	A5SS	0.5	50	50	ENSMUST00000036682.9	ENSMUSG00000033885.16	Pxk	chr14	protein_coding	PX domain containing serine/threonine kinase
chr14	14430025	14466810	-	14430025;14441536	14441384;14466810	ES	0.5	50	50	ENSMUST00000166497.9	ENSMUSG00000025277.15	Abhd6	chr14	protein_coding	abhydrolase domain containing 6
chr14	14492649	14493498	+	14492649	14495645	A3SS	0.5	50	50	ENSMUST00000026315.8	ENSMUSG00000025279.8	Dnase1l3	chr14	protein_coding	deoxyribonuclease 1-like 3
chr14	14582236;14583747	14583650;14585026	-	14582236	14585026	cassetteExon	0.5	100	100	ENSMUST00000052678.9	ENSMUSG00000025278.10	Flnb	chr14	protein_coding	filamin, beta
chr14	14681292	14692961	+	14681292	14683660	3pMXE	0.33	50	50	ENSMUST00000238229.2	ENSMUSG00000072723.13	Gm10044	chr14	transcribed_unprocessed_pseudogene	predicted gene 10044
chr14	14681292	14698471	+	14681292	14683660	3pMXE	0.33	50	50	ENSMUST00000238229.2	ENSMUSG00000072723.13	Gm10044	chr14	transcribed_unprocessed_pseudogene	predicted gene 10044
chr14	14681292	14698471	+	14681292;14693262	14692961;14698471	ES	0.25	50	50	ENSMUST00000081331.12	ENSMUSG00000072723.13	Gm10044	chr14	transcribed_unprocessed_pseudogene	predicted gene 10044
chr14	14681292;14683766	14683660;14698471	+	14681292;14693262	14692961;14698471	MXE	0.5	100	100	ENSMUST00000081331.12	ENSMUSG00000072723.13	Gm10044	chr14	transcribed_unprocessed_pseudogene	predicted gene 10044
chr14	14704991	14712668	+	14704991	14724790	A3SS	0.5	50	50	ENSMUST00000081331.12	ENSMUSG00000072723.13	Gm10044	chr14	transcribed_unprocessed_pseudogene	predicted gene 10044
chr14	14695915	14698471	+	14693262	14698471	A5SS	0.25	50	50	ENSMUST00000081331.12	ENSMUSG00000072723.13	Gm10044	chr14	transcribed_unprocessed_pseudogene	predicted gene 10044
chr14	14681292;14683766	14683660;14698471	+	14681292	14698471	cassetteExon	0.5	100	100	ENSMUST00000166813.8	ENSMUSG00000072723.13	Gm10044	chr14	transcribed_unprocessed_pseudogene	predicted gene 10044
chr14	14695915	14698471	+	14681292	14698471	A5SS	0.25	50	50	ENSMUST00000166813.8	ENSMUSG00000072723.13	Gm10044	chr14	transcribed_unprocessed_pseudogene	predicted gene 10044
chr14	14695915	14698471	+	14683766	14698471	A5SS	0.25	50	50	ENSMUST00000170177.2	ENSMUSG00000072723.13	Gm10044	chr14	transcribed_unprocessed_pseudogene	predicted gene 10044
chr14	15024427	15048042	-	14961731	15048042	A3SS	0.5	50	50	ENSMUST00000180508.8	ENSMUSG00000090585.9	4933406F09Rik	chr14	lncRNA	RIKEN cDNA 4933406F09 gene
chr14	15048139	15057167	-	15048246	15057167	A3SS	0.5	50	50	ENSMUST00000180508.8	ENSMUSG00000090585.9	4933406F09Rik	chr14	lncRNA	RIKEN cDNA 4933406F09 gene
chr14	15089575	15093950	+	15065862	15093950	A5SS	0.5	50	50	ENSMUST00000181509.2	ENSMUSG00000071591.4	Gm10339	chr14	lncRNA	predicted gene 10339
chr14	15447230	15457002	+	15443897	15457002	A5SS	0.5	50	50	ENSMUST00000170738.3	ENSMUSG00000093985.8	Gm10406	chr14	protein_coding	predicted gene 10406
chr14	15725485	15776255	-	15686175	15776255	A3SS	0.5	50	50	ENSMUST00000181787.2	ENSMUSG00000097901.8	Gm26680	chr14	lncRNA	predicted gene, 26680
chr14	15776352	15785372	-	15776459	15785372	A3SS	0.5	50	50	ENSMUST00000181787.2	ENSMUSG00000097901.8	Gm26680	chr14	lncRNA	predicted gene, 26680
chr14	15698390	15702664	+	15698390	15703486	A3SS	0.5	50	50	ENSMUST00000170673.2	ENSMUSG00000090404.8	Gm8362	chr14	protein_coding	predicted gene 8362
chr14	15935539	15940619	+	15935539	15939789	A3SS	0.5	50	50	ENSMUST00000163636.8	ENSMUSG00000090627.9	Gm8356	chr14	protein_coding	predicted gene 8356
chr14	16031272	16108452	-	16023131	16108452	A3SS	0.5	50	50	ENSMUST00000181015.8	ENSMUSG00000097447.8	Gm26630	chr14	lncRNA	predicted gene, 26630
chr14	16108549	16117583	-	16108656	16117583	A3SS	0.5	50	50	ENSMUST00000181015.8	ENSMUSG00000097447.8	Gm26630	chr14	lncRNA	predicted gene, 26630
chr14	16028185	16032833	+	16028185	16033652	A3SS	0.5	50	50	ENSMUST00000169152.8	ENSMUSG00000095360.8	Gm3594	chr14	protein_coding	predicted gene 3594
chr14	16117978;16125489	16125315;16126083	+	16117978	16126083	cassetteExon	0.5	100	100	ENSMUST00000238283.2	ENSMUSG00000096828.3	Gm3618	chr14	transcribed_unprocessed_pseudogene	predicted gene 3618
chr14	16117978	16118643	+	16117978	16126083	A3SS	0.33	50	50	ENSMUST00000238283.2	ENSMUSG00000096828.3	Gm3618	chr14	transcribed_unprocessed_pseudogene	predicted gene 3618
chr14	16126276	16154696	+	16126276	16157255	A3SS	0.5	50	50	ENSMUST00000238283.2	ENSMUSG00000096828.3	Gm3618	chr14	transcribed_unprocessed_pseudogene	predicted gene 3618
chr14	16117978	16125315	+	16117978	16118643	3pMXE	0.33	50	50	ENSMUST00000238435.2	ENSMUSG00000096828.3	Gm3618	chr14	transcribed_unprocessed_pseudogene	predicted gene 3618
chr14	16167970	16172262	+	16167970	16173081	A3SS	0.5	50	50	ENSMUST00000112737.10	ENSMUSG00000094811.8	Gm21103	chr14	protein_coding	predicted gene, 21103
chr14	16346986	16351261	+	16346986	16352081	A3SS	0.5	50	50	ENSMUST00000112742.4	ENSMUSG00000079371.10	Gm3476	chr14	protein_coding	predicted gene 3476
chr14	16414514	16419161	+	16414514	16419979	A3SS	0.5	50	50	ENSMUST00000170613.8	ENSMUSG00000091882.9	Gm6337	chr14	protein_coding	predicted gene 6337
chr14	16449296	16452689	+	16449296	16451871	A3SS	0.5	50	50	ENSMUST00000164139.2	ENSMUSG00000091568.9	Gm8206	chr14	protein_coding	predicted gene 8206
chr14	16895577	16904595	+	16895577	16904488	A3SS	0.5	50	50	ENSMUST00000181472.8	ENSMUSG00000097450.8	Gm26893	chr14	lncRNA	predicted gene, 26893
chr14	16904692	16925721	+	16904692	16955363	A3SS	0.5	50	50	ENSMUST00000181472.8	ENSMUSG00000097450.8	Gm26893	chr14	lncRNA	predicted gene, 26893
chr14	17248207	17257225	+	17248207	17257118	A3SS	0.5	50	50	ENSMUST00000181033.8	ENSMUSG00000097218.8	Gm26552	chr14	lncRNA	predicted gene, 26552
chr14	17257322	17278351	+	17257322	17308004	A3SS	0.5	50	50	ENSMUST00000181033.8	ENSMUSG00000097218.8	Gm26552	chr14	lncRNA	predicted gene, 26552
chr14	17330139	17335217	-	17330957	17335217	A3SS	0.5	50	50	ENSMUST00000165713.8	ENSMUSG00000079378.9	Gm8279	chr14	protein_coding	predicted gene 8279
chr14	17477689	17482791	-	17478509	17482791	A3SS	0.5	50	50	ENSMUST00000171964.8	ENSMUSG00000090827.9	Gm8297	chr14	protein_coding	predicted gene 8297
chr14	17539505	17548521	+	17539505	17548414	A3SS	0.5	50	50	ENSMUST00000181157.8	ENSMUSG00000097278.8	Gm26650	chr14	lncRNA	predicted gene, 26650
chr14	17548618	17571731	+	17548618	17601473	A3SS	0.5	50	50	ENSMUST00000181157.8	ENSMUSG00000097278.8	Gm26650	chr14	lncRNA	predicted gene, 26650
chr14	17752420	17757501	-	17753238	17757501	A3SS	0.5	50	50	ENSMUST00000171305.2	ENSMUSG00000091700.8	Gm7876	chr14	protein_coding	predicted gene 7876
chr14	17829296	17834381	-	17830115	17834381	A3SS	0.5	50	50	ENSMUST00000170546.8	ENSMUSG00000094258.8	Gm8159	chr14	protein_coding	predicted gene 8159
chr14	17884480	17893497	+	17884480	17893390	A3SS	0.5	50	50	ENSMUST00000181089.2	ENSMUSG00000097822.8	Gm26655	chr14	lncRNA	predicted gene, 26655
chr14	17893594	17908697	+	17893594	17917975	A3SS	0.5	50	50	ENSMUST00000181089.2	ENSMUSG00000097822.8	Gm26655	chr14	lncRNA	predicted gene, 26655
chr14	17979921	17984994	-	17980739	17984994	A3SS	0.5	50	50	ENSMUST00000167902.2	ENSMUSG00000091148.8	Gm3182	chr14	protein_coding	predicted gene 3182
chr14	18063750	18069222	-	18064569	18069222	A3SS	0.5	50	50	ENSMUST00000167245.8	ENSMUSG00000095056.8	Gm3159	chr14	protein_coding	predicted gene 3159
chr14	18144376	18149462	-	18145196	18149462	A3SS	0.5	50	50	ENSMUST00000171810.8	ENSMUSG00000079389.11	Gm3149	chr14	protein_coding	predicted gene 3149
chr14	18296595	18301710	-	18297413	18301710	A3SS	0.5	50	50	ENSMUST00000171866.8	ENSMUSG00000090764.9	Gm3127	chr14	protein_coding	predicted gene 3127
chr14	18585832	18594867	+	18585832	18594760	A3SS	0.5	50	50	ENSMUST00000181497.8	ENSMUSG00000097127.8	Gm26886	chr14	lncRNA	predicted gene, 26886
chr14	18594964	18618072	+	18594964	18646919	A3SS	0.5	50	50	ENSMUST00000181497.8	ENSMUSG00000097127.8	Gm26886	chr14	lncRNA	predicted gene, 26886
chr14	19199104	19207207	-	19199104;19199872	19199698;19207207	ES	0.33	50	50	ENSMUST00000112812.8	ENSMUSG00000079407.10	1700110I01Rik	chr14	lncRNA	RIKEN cDNA 1700110I01 gene
chr14	19165106	19198911	-	19165109	19198911	A3SS	0.5	50	50	ENSMUST00000112812.8	ENSMUSG00000079407.10	1700110I01Rik	chr14	lncRNA	RIKEN cDNA 1700110I01 gene
chr14	19206542	19207207	-	19199872	19207207	A3SS	0.33	50	50	ENSMUST00000112812.8	ENSMUSG00000079407.10	1700110I01Rik	chr14	lncRNA	RIKEN cDNA 1700110I01 gene
chr14	19165109	19169501	-	19165109	19198911	A5SS	0.33	50	50	ENSMUST00000112812.8	ENSMUSG00000079407.10	1700110I01Rik	chr14	lncRNA	RIKEN cDNA 1700110I01 gene
chr14	19165109	19196011	-	19165109	19198911	A5SS	0.33	50	50	ENSMUST00000112812.8	ENSMUSG00000079407.10	1700110I01Rik	chr14	lncRNA	RIKEN cDNA 1700110I01 gene
chr14	19165109	19169501	-	19165109	19196011	A5SS	0.33	50	50	ENSMUST00000186836.2	ENSMUSG00000079407.10	1700110I01Rik	chr14	lncRNA	RIKEN cDNA 1700110I01 gene
chr14	19206542	19207207	-	19199104	19207207	A3SS	0.33	50	50	ENSMUST00000188883.2	ENSMUSG00000079407.10	1700110I01Rik	chr14	lncRNA	RIKEN cDNA 1700110I01 gene
chr14	19207602	19216629	+	19207602	19216522	A3SS	0.5	50	50	ENSMUST00000165178.8	ENSMUSG00000091849.8	Gm17188	chr14	lncRNA	predicted gene 17188
chr14	19216726	19239785	+	19216726	19283345	A3SS	0.5	50	50	ENSMUST00000165178.8	ENSMUSG00000091849.8	Gm17188	chr14	lncRNA	predicted gene 17188
chr14	19248789	19261112	-	19259732	19261112	A3SS&ES	0.33	50	50	ENSMUST00000112797.12	ENSMUSG00000096039.9	D830030K20Rik	chr14	protein_coding	RIKEN cDNA D830030K20 gene
chr14	19248789	19261112	-	19244544	19261112	A3SS	0.33	50	50	ENSMUST00000225885.2	ENSMUSG00000096039.9	D830030K20Rik	chr14	protein_coding	RIKEN cDNA D830030K20 gene
chr14	19259732	19261112	-	19244544	19261112	A3SS	0.33	50	50	ENSMUST00000225885.2	ENSMUSG00000096039.9	D830030K20Rik	chr14	protein_coding	RIKEN cDNA D830030K20 gene
chr14	19244544	19245277	-	19244544	19261112	A5SS	0.5	50	50	ENSMUST00000225885.2	ENSMUSG00000096039.9	D830030K20Rik	chr14	protein_coding	RIKEN cDNA D830030K20 gene
chr14	19273417	19278484	-	19274235	19278484	A3SS	0.5	50	50	ENSMUST00000171150.8	ENSMUSG00000079409.9	Gm5795	chr14	protein_coding	predicted gene 5795
chr14	19554072	19554737	-	19547399	19554737	A3SS	0.5	50	50	ENSMUST00000225729.2	ENSMUSG00000114272.2	Gm36704	chr14	transcribed_processed_pseudogene	predicted gene, 36704
chr14	19555132	19564158	+	19555132	19564051	A3SS	0.5	50	50	ENSMUST00000225038.2	ENSMUSG00000114630.2	Gm48105	chr14	lncRNA	predicted gene, 48105
chr14	19666250	19667364	+	19666250	19678674	A3SS	0.5	50	50	ENSMUST00000224808.2	ENSMUSG00000068776.8	4930469B13Rik	chr14	lncRNA	RIKEN cDNA 4930469B13 gene
chr14	19856082;19856678	19856580;19857995	+	19856082	19857995	cassetteExon	0.5	100	100	ENSMUST00000022340.5	ENSMUSG00000021806.5	Nid2	chr14	protein_coding	nidogen 2
chr14	19941469	20027026	-	19941469;20010762	20010722;20027026	ES	0.5	50	50	ENSMUST00000160013.8	ENSMUSG00000043004.14	Gng2	chr14	protein_coding	guanine nucleotide binding protein (G protein), gamma 2
chr14	19941469;19974002	19973936;20010722	-	19941469	20010722	cassetteExon	0.5	100	100	ENSMUST00000160013.8	ENSMUSG00000043004.14	Gng2	chr14	protein_coding	guanine nucleotide binding protein (G protein), gamma 2
chr14	20010762	20026643	-	20010762	20027026	A5SS	0.33	50	50	ENSMUST00000160013.8	ENSMUSG00000043004.14	Gng2	chr14	protein_coding	guanine nucleotide binding protein (G protein), gamma 2
chr14	20010762	20027214	-	20010762	20027026	A5SS	0.33	50	50	ENSMUST00000160013.8	ENSMUSG00000043004.14	Gng2	chr14	protein_coding	guanine nucleotide binding protein (G protein), gamma 2
chr14	20010762	20027214	-	20010762;20027065	20027026;20027214	ES	0.5	50	50	ENSMUST00000055100.14	ENSMUSG00000043004.14	Gng2	chr14	protein_coding	guanine nucleotide binding protein (G protein), gamma 2
chr14	19941469	19973936	-	19941469	20027026	A5SS	0.33	50	50	ENSMUST00000159028.8	ENSMUSG00000043004.14	Gng2	chr14	protein_coding	guanine nucleotide binding protein (G protein), gamma 2
chr14	19941469;20027065	20027026;20027214	-	19941469;20010762	20010722;20027214	MXE	0.5	100	100	ENSMUST00000162425.8	ENSMUSG00000043004.14	Gng2	chr14	protein_coding	guanine nucleotide binding protein (G protein), gamma 2
chr14	20010762;20027065	20026643;20027214	-	20010762	20027214	cassetteExon	0.5	100	100	ENSMUST00000162425.8	ENSMUSG00000043004.14	Gng2	chr14	protein_coding	guanine nucleotide binding protein (G protein), gamma 2
chr14	20010762	20027214	-	20010762	20026643	5pMXE	0.33	50	50	ENSMUST00000161247.2	ENSMUSG00000043004.14	Gng2	chr14	protein_coding	guanine nucleotide binding protein (G protein), gamma 2
chr14	20127712	20188407	-	20127712	20132946	5pMXE	0.5	50	50	ENSMUST00000059666.6	ENSMUSG00000045107.6	Saysd1	chr14	protein_coding	SAYSVFN motif domain containing 1
chr14	20195190	20195351	-	20195190	20196569	A5SS	0.5	50	50	ENSMUST00000024011.10	ENSMUSG00000023243.10	Kcnk5	chr14	protein_coding	potassium channel, subfamily K, member 5
chr14	20315348	20319018	-	20315348	20317404	5pMXE	0.5	50	50	ENSMUST00000225596.2	ENSMUSG00000023387.9	Kcnk16	chr14	protein_coding	potassium channel, subfamily K, member 16
chr14	20344860	20350655	+	20344860;20345334	20345139;20350655	ES	0.25	50	50	ENSMUST00000223663.2	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20345334	20354021	+	20345334;20350747	20350655;20354021	ES	0.33	50	50	ENSMUST00000223663.2	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20359865	20361539	+	20359865;20360801	20360690;20361539	ES	0.5	50	50	ENSMUST00000223663.2	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20344860;20347699	20347583;20350655	+	20344860;20345334	20345139;20350655	MXE	0.5	100	100	ENSMUST00000223663.2	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20356434;20357432	20357301;20357761	+	20356434	20357761	cassetteExon	0.5	100	100	ENSMUST00000223663.2	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20344860	20345156	+	20344860	20345139	A3SS	0.2	50	50	ENSMUST00000223663.2	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20345277	20350655	+	20345334	20350655	A5SS	0.25	50	50	ENSMUST00000223663.2	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20356317	20357761	+	20356434	20357761	A5SS	0.33	50	50	ENSMUST00000223663.2	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20344860	20354021	+	20344860;20345334	20345156;20354021	ES	0.33	50	50	ENSMUST00000225722.2	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20344860;20350747	20350655;20354021	+	20344860;20345334	20345156;20354021	MXE	0.5	100	100	ENSMUST00000225722.2	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20344860	20347583	+	20344860	20345156	A3SS&ES	0.2	50	50	ENSMUST00000225722.2	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20359865	20361539	+	20359865	20360690	3pMXE	0.5	50	50	ENSMUST00000225354.2	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20344860;20345334	20345139;20354021	+	20344860	20354021	cassetteExon	0.5	100	100	ENSMUST00000225354.2	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20344860;20350747	20350655;20354021	+	20344860	20354021	cassetteExon	0.5	100	100	ENSMUST00000225354.2	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20344860	20347583	+	20344860	20354021	A3SS	0.2	50	50	ENSMUST00000225354.2	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20344860;20345277	20345139;20350655	+	20344860	20350655	cassetteExon	0.5	100	100	ENSMUST00000022343.6	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20344860;20345334	20345139;20354021	+	20344860;20350747	20350655;20354021	MXE	0.5	100	100	ENSMUST00000022343.6	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20344860;20345277	20345156;20350655	+	20344860	20350655	cassetteExon	0.5	100	100	ENSMUST00000022343.6	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20344860;20345334	20345156;20350655	+	20344860	20350655	cassetteExon	0.5	100	100	ENSMUST00000022343.6	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20344860;20347699	20347583;20350655	+	20344860	20350655	cassetteExon	0.5	100	100	ENSMUST00000022343.6	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20344860;20347699	20347583;20350655	+	20344860;20345334	20345156;20350655	MXE	0.5	100	100	ENSMUST00000224066.2	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20357432	20357761	+	20356317	20357761	A5SS	0.33	50	50	ENSMUST00000224066.2	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20344860;20347699	20347583;20350655	+	20344860;20345277	20345156;20350655	MXE	0.5	100	100	ENSMUST00000223941.2	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20345334	20354021	+	20350747	20354021	A5SS&ES	0.33	50	50	ENSMUST00000223941.2	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20359865	20361539	+	20360801	20361539	A5SS&ES	0.5	50	50	ENSMUST00000224311.2	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20344860	20350655	+	20344860	20345156	3pMXE	0.2	50	50	ENSMUST00000224674.2	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20344860	20354021	+	20344860	20345156	3pMXE	0.2	50	50	ENSMUST00000224674.2	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20344860;20345277	20345139;20350655	+	20344860;20347699	20347583;20350655	MXE	0.5	100	100	ENSMUST00000224377.2	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20344860;20345334	20345139;20354021	+	20344860;20350747	20347583;20354021	MXE	0.5	100	100	ENSMUST00000224377.2	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20344860;20345334	20345156;20354021	+	20344860;20350747	20347583;20354021	MXE	0.5	100	100	ENSMUST00000224377.2	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20344860	20354021	+	20350747	20354021	5pMXE	0.33	50	50	ENSMUST00000225442.2	ENSMUSG00000021809.11	Nudt13	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 13
chr14	20388564	20396679	-	20388564;20393441	20393324;20396679	ES	0.5	50	50	ENSMUST00000022344.4	ENSMUSG00000021810.4	Ecd	chr14	protein_coding	ecdysoneless cell cycle regulator
chr14	20393441	20397862	-	20393441;20396889	20396679;20397862	ES	0.5	50	50	ENSMUST00000022344.4	ENSMUSG00000021810.4	Ecd	chr14	protein_coding	ecdysoneless cell cycle regulator
chr14	20388564;20392834	20392731;20393324	-	20388564	20393324	cassetteExon	0.5	100	100	ENSMUST00000022344.4	ENSMUSG00000021810.4	Ecd	chr14	protein_coding	ecdysoneless cell cycle regulator
chr14	20388564;20393441	20393324;20397862	-	20388564;20396889	20396679;20397862	MXE	0.5	100	100	ENSMUST00000223955.2	ENSMUSG00000021810.4	Ecd	chr14	protein_coding	ecdysoneless cell cycle regulator
chr14	20388564	20392731	-	20388564	20396679	A5SS	0.33	50	50	ENSMUST00000223955.2	ENSMUSG00000021810.4	Ecd	chr14	protein_coding	ecdysoneless cell cycle regulator
chr14	20401484	20406423	+	20401484;20402907	20402772;20406423	ES	0.5	50	50	ENSMUST00000224930.2	ENSMUSG00000039599.17	Fam149b	chr14	protein_coding	family with sequence similarity 149, member B
chr14	20406565	20413331	+	20406565;20408208	20408092;20413331	ES	0.33	50	50	ENSMUST00000224930.2	ENSMUSG00000039599.17	Fam149b	chr14	protein_coding	family with sequence similarity 149, member B
chr14	20408208;20409984	20409823;20413331	+	20408208	20413331	cassetteExon	0.5	100	100	ENSMUST00000224930.2	ENSMUSG00000039599.17	Fam149b	chr14	protein_coding	family with sequence similarity 149, member B
chr14	20398462	20401362	+	20398462	20401380	A3SS	0.5	50	50	ENSMUST00000224930.2	ENSMUSG00000039599.17	Fam149b	chr14	protein_coding	family with sequence similarity 149, member B
chr14	20402907	20404840	+	20402907	20406423	A3SS	0.5	50	50	ENSMUST00000224930.2	ENSMUSG00000039599.17	Fam149b	chr14	protein_coding	family with sequence similarity 149, member B
chr14	20406565;20413518	20413331;20424398	+	20406565	20424398	cassetteExon	0.5	100	100	ENSMUST00000225597.2	ENSMUSG00000039599.17	Fam149b	chr14	protein_coding	family with sequence similarity 149, member B
chr14	20406565	20408092	+	20406565	20424398	A3SS	0.33	50	50	ENSMUST00000225597.2	ENSMUSG00000039599.17	Fam149b	chr14	protein_coding	family with sequence similarity 149, member B
chr14	20402905	20424398	+	20406565	20424398	A5SS&ES	0.25	50	50	ENSMUST00000225597.2	ENSMUSG00000039599.17	Fam149b	chr14	protein_coding	family with sequence similarity 149, member B
chr14	20409984	20424398	+	20406565	20424398	A5SS	0.25	50	50	ENSMUST00000225597.2	ENSMUSG00000039599.17	Fam149b	chr14	protein_coding	family with sequence similarity 149, member B
chr14	20401484	20406423	+	20401484	20402772	3pMXE	0.5	50	50	ENSMUST00000224110.2	ENSMUSG00000039599.17	Fam149b	chr14	protein_coding	family with sequence similarity 149, member B
chr14	20409984	20424398	+	20409984;20413518	20413331;20424398	ES	0.25	50	50	ENSMUST00000225942.2	ENSMUSG00000039599.17	Fam149b	chr14	protein_coding	family with sequence similarity 149, member B
chr14	20425681	20428468	+	20425681;20428067	20427843;20428468	ES	0.5	50	50	ENSMUST00000225942.2	ENSMUSG00000039599.17	Fam149b	chr14	protein_coding	family with sequence similarity 149, member B
chr14	20413518	20417914	+	20413518	20424398	A3SS	0.5	50	50	ENSMUST00000225942.2	ENSMUSG00000039599.17	Fam149b	chr14	protein_coding	family with sequence similarity 149, member B
chr14	20428951	20431817	+	20428951	20431821	A3SS	0.5	50	50	ENSMUST00000225942.2	ENSMUSG00000039599.17	Fam149b	chr14	protein_coding	family with sequence similarity 149, member B
chr14	20402905	20424398	+	20413518	20424398	A5SS&ES	0.25	50	50	ENSMUST00000225942.2	ENSMUSG00000039599.17	Fam149b	chr14	protein_coding	family with sequence similarity 149, member B
chr14	20408208;20409984	20409823;20424398	+	20408208;20413518	20413331;20424398	MXE	0.5	100	100	ENSMUST00000051915.7	ENSMUSG00000039599.17	Fam149b	chr14	protein_coding	family with sequence similarity 149, member B
chr14	20401484;20402905	20402772;20424398	+	20401484;20413518	20406423;20424398	MXE	0.5	100	100	ENSMUST00000225834.2	ENSMUSG00000039599.17	Fam149b	chr14	protein_coding	family with sequence similarity 149, member B
chr14	20409984	20413331	+	20406565	20413331	A5SS	0.33	50	50	ENSMUST00000090503.12	ENSMUSG00000039599.17	Fam149b	chr14	protein_coding	family with sequence similarity 149, member B
chr14	20409984	20424398	+	20413518	20424398	A5SS&ES	0.25	50	50	ENSMUST00000090503.12	ENSMUSG00000039599.17	Fam149b	chr14	protein_coding	family with sequence similarity 149, member B
chr14	20401484;20406565	20406423;20424398	+	20401484;20402905	20402772;20424398	MXE	0.5	100	100	ENSMUST00000225991.2	ENSMUSG00000039599.17	Fam149b	chr14	protein_coding	family with sequence similarity 149, member B
chr14	20409984	20424398	+	20402905	20424398	A5SS	0.25	50	50	ENSMUST00000225991.2	ENSMUSG00000039599.17	Fam149b	chr14	protein_coding	family with sequence similarity 149, member B
chr14	20406565;20413518	20413331;20424398	+	20406565;20409984	20408092;20424398	MXE	0.5	100	100	ENSMUST00000224079.2	ENSMUSG00000039599.17	Fam149b	chr14	protein_coding	family with sequence similarity 149, member B
chr14	20401484	20406423	+	20402907	20406423	5pMXE	0.5	50	50	ENSMUST00000225114.2	ENSMUSG00000039599.17	Fam149b	chr14	protein_coding	family with sequence similarity 149, member B
chr14	20442221	20443246	-	20442221	20443549	A5SS	0.5	50	50	ENSMUST00000061444.5	ENSMUSG00000049960.5	Mrps16	chr14	protein_coding	mitochondrial ribosomal protein S16
chr14	20462540	20470693	-	20462540;20466696	20466565;20470693	ES	0.5	50	50	ENSMUST00000056073.14	ENSMUSG00000039543.17	Cfap70	chr14	protein_coding	cilia and flagella associated protein 70
chr14	20475288	20479463	-	20475288;20475597	20475430;20479463	ES	0.5	50	50	ENSMUST00000056073.14	ENSMUSG00000039543.17	Cfap70	chr14	protein_coding	cilia and flagella associated protein 70
chr14	20479597	20486791	-	20479597;20482091	20481992;20486791	ES	0.5	50	50	ENSMUST00000056073.14	ENSMUSG00000039543.17	Cfap70	chr14	protein_coding	cilia and flagella associated protein 70
chr14	20454724;20458439	20458323;20458537	-	20454724	20458537	cassetteExon	0.5	100	100	ENSMUST00000056073.14	ENSMUSG00000039543.17	Cfap70	chr14	protein_coding	cilia and flagella associated protein 70
chr14	20498787	20502270	-	20498725	20502270	A3SS	0.5	50	50	ENSMUST00000056073.14	ENSMUSG00000039543.17	Cfap70	chr14	protein_coding	cilia and flagella associated protein 70
chr14	20479597	20479873	-	20479597	20481992	A5SS	0.33	50	50	ENSMUST00000056073.14	ENSMUSG00000039543.17	Cfap70	chr14	protein_coding	cilia and flagella associated protein 70
chr14	20479597	20479873	-	20479597	20486791	A5SS	0.33	50	50	ENSMUST00000141432.8	ENSMUSG00000039543.17	Cfap70	chr14	protein_coding	cilia and flagella associated protein 70
chr14	20475288	20479463	-	20475597	20479463	3pMXE	0.5	50	50	ENSMUST00000148692.2	ENSMUSG00000039543.17	Cfap70	chr14	protein_coding	cilia and flagella associated protein 70
chr14	20515014;20517591	20517526;20517939	-	20515014	20517939	cassetteExon	0.5	100	100	ENSMUST00000065504.17	ENSMUSG00000021814.18	Anxa7	chr14	protein_coding	annexin A7
chr14	20523397;20529408	20529352;20529963	-	20523397	20529963	cassetteExon	0.5	100	100	ENSMUST00000065504.17	ENSMUSG00000021814.18	Anxa7	chr14	protein_coding	annexin A7
chr14	20505894	20514677	-	20513088	20514677	A3SS&ES	0.5	50	50	ENSMUST00000065504.17	ENSMUSG00000021814.18	Anxa7	chr14	protein_coding	annexin A7
chr14	20523397	20529848	-	20523397	20529963	A5SS	0.33	50	50	ENSMUST00000065504.17	ENSMUSG00000021814.18	Anxa7	chr14	protein_coding	annexin A7
chr14	20523397	20529352	-	20523397	20529848	A5SS	0.33	50	50	ENSMUST00000224975.2	ENSMUSG00000021814.18	Anxa7	chr14	protein_coding	annexin A7
chr14	20515014	20517939	-	20517591	20517939	3pMXE	0.5	50	50	ENSMUST00000223960.2	ENSMUSG00000021814.18	Anxa7	chr14	protein_coding	annexin A7
chr14	20551730	20558692	-	20551730;20553344	20553315;20558692	ES	0.5	50	50	ENSMUST00000159027.8	ENSMUSG00000021816.12	Ppp3cb	chr14	protein_coding	protein phosphatase 3, catalytic subunit, beta isoform
chr14	20559565	20565591	-	20559568	20565591	A3SS	0.5	50	50	ENSMUST00000159027.8	ENSMUSG00000021816.12	Ppp3cb	chr14	protein_coding	protein phosphatase 3, catalytic subunit, beta isoform
chr14	20551730	20558692	-	20551730	20553315	5pMXE	0.5	50	50	ENSMUST00000162217.2	ENSMUSG00000021816.12	Ppp3cb	chr14	protein_coding	protein phosphatase 3, catalytic subunit, beta isoform
chr14	20596412;20600243	20600139;20612054	+	20596412	20612054	cassetteExon	0.5	100	100	ENSMUST00000129237.2	ENSMUSG00000084925.9	1810062O18Rik	chr14	lncRNA	RIKEN cDNA 1810062O18 gene
chr14	20612164	20614849	+	20612209	20614849	A5SS	0.5	50	50	ENSMUST00000129237.2	ENSMUSG00000084925.9	1810062O18Rik	chr14	lncRNA	RIKEN cDNA 1810062O18 gene
chr14	20614907	20620410	+	20614907;20615115	20615079;20620410	ES	0.25	50	50	ENSMUST00000128848.8	ENSMUSG00000084925.9	1810062O18Rik	chr14	lncRNA	RIKEN cDNA 1810062O18 gene
chr14	20615115;20617117	20617016;20620410	+	20615115	20620410	cassetteExon	0.5	100	100	ENSMUST00000128848.8	ENSMUSG00000084925.9	1810062O18Rik	chr14	lncRNA	RIKEN cDNA 1810062O18 gene
chr14	20615115;20620090	20619938;20620410	+	20615115	20620410	cassetteExon	0.5	100	100	ENSMUST00000128848.8	ENSMUSG00000084925.9	1810062O18Rik	chr14	lncRNA	RIKEN cDNA 1810062O18 gene
chr14	20615115	20616066	+	20615115	20620410	A3SS	0.25	50	50	ENSMUST00000128848.8	ENSMUSG00000084925.9	1810062O18Rik	chr14	lncRNA	RIKEN cDNA 1810062O18 gene
chr14	20615115;20617117	20617016;20620410	+	20615115;20620090	20619938;20620410	MXE	0.5	100	100	ENSMUST00000141265.8	ENSMUSG00000084925.9	1810062O18Rik	chr14	lncRNA	RIKEN cDNA 1810062O18 gene
chr14	20615115	20616066	+	20615115	20619938	A3SS	0.25	50	50	ENSMUST00000141265.8	ENSMUSG00000084925.9	1810062O18Rik	chr14	lncRNA	RIKEN cDNA 1810062O18 gene
chr14	20617117	20620410	+	20614907	20620410	A5SS	0.25	50	50	ENSMUST00000225721.2	ENSMUSG00000084925.9	1810062O18Rik	chr14	lncRNA	RIKEN cDNA 1810062O18 gene
chr14	20620090	20620410	+	20614907	20620410	A5SS	0.25	50	50	ENSMUST00000225721.2	ENSMUSG00000084925.9	1810062O18Rik	chr14	lncRNA	RIKEN cDNA 1810062O18 gene
chr14	20615115	20617016	+	20615115	20616066	3pMXE	0.25	50	50	ENSMUST00000224755.2	ENSMUSG00000084925.9	1810062O18Rik	chr14	lncRNA	RIKEN cDNA 1810062O18 gene
chr14	20614907	20620410	+	20615115	20620410	5pMXE	0.25	50	50	ENSMUST00000223899.2	ENSMUSG00000084925.9	1810062O18Rik	chr14	lncRNA	RIKEN cDNA 1810062O18 gene
chr14	20657973	20690985	-	20657973	20668361	5pMXE	0.5	50	50	ENSMUST00000035340.14	ENSMUSG00000034235.18	Usp54	chr14	protein_coding	ubiquitin specific peptidase 54
chr14	20627654;20631695	20631525;20633390	-	20627654	20633390	cassetteExon	0.5	100	100	ENSMUST00000035340.14	ENSMUSG00000034235.18	Usp54	chr14	protein_coding	ubiquitin specific peptidase 54
chr14	20654212	20655126	-	20654212	20657150	A5SS	0.5	50	50	ENSMUST00000035340.14	ENSMUSG00000034235.18	Usp54	chr14	protein_coding	ubiquitin specific peptidase 54
chr14	20701335	20701544	-	20701335	20703692	A5SS	0.5	50	50	ENSMUST00000090469.8	ENSMUSG00000068697.8	Myoz1	chr14	protein_coding	myozenin 1
chr14	20712533	20714465	-	20712533	20715812	A5SS	0.5	50	50	ENSMUST00000057090.12	ENSMUSG00000039376.14	Synpo2l	chr14	protein_coding	synaptopodin 2-like
chr14	20716867	20718159	-	20716867	20718168	A5SS	0.5	50	50	ENSMUST00000057090.12	ENSMUSG00000039376.14	Synpo2l	chr14	protein_coding	synaptopodin 2-like
chr14	20726225	20732747	+	20726225;20729731	20729596;20732747	ES	0.5	50	50	ENSMUST00000048657.10	ENSMUSG00000039367.12	Sec24c	chr14	protein_coding	Sec24 related gene family, member C (S. cerevisiae)
chr14	20724456;20725927	20725799;20726026	+	20724456	20726026	cassetteExon	0.5	100	100	ENSMUST00000048657.10	ENSMUSG00000039367.12	Sec24c	chr14	protein_coding	Sec24 related gene family, member C (S. cerevisiae)
chr14	20734089;20735348	20735280;20736577	+	20734089	20736577	cassetteExon	0.5	100	100	ENSMUST00000048657.10	ENSMUSG00000039367.12	Sec24c	chr14	protein_coding	Sec24 related gene family, member C (S. cerevisiae)
chr14	20724805	20726026	+	20724456	20726026	A5SS	0.33	50	50	ENSMUST00000048657.10	ENSMUSG00000039367.12	Sec24c	chr14	protein_coding	Sec24 related gene family, member C (S. cerevisiae)
chr14	20726225	20732747	+	20726225	20729596	3pMXE	0.5	50	50	ENSMUST00000224061.2	ENSMUSG00000039367.12	Sec24c	chr14	protein_coding	Sec24 related gene family, member C (S. cerevisiae)
chr14	20724805	20725799	+	20724456	20725799	A5SS	0.5	50	50	ENSMUST00000224963.2	ENSMUSG00000039367.12	Sec24c	chr14	protein_coding	Sec24 related gene family, member C (S. cerevisiae)
chr14	20724805	20726026	+	20725927	20726026	A5SS&ES	0.33	50	50	ENSMUST00000224963.2	ENSMUSG00000039367.12	Sec24c	chr14	protein_coding	Sec24 related gene family, member C (S. cerevisiae)
chr14	20724805;20725927	20725799;20726026	+	20724805	20726026	cassetteExon	0.5	100	100	ENSMUST00000225108.2	ENSMUSG00000039367.12	Sec24c	chr14	protein_coding	Sec24 related gene family, member C (S. cerevisiae)
chr14	20753265	20753344	+	20753265	20753358	A3SS	0.5	50	50	ENSMUST00000071215.5	ENSMUSG00000063787.5	Chchd1	chr14	protein_coding	coiled-coil-helix-coiled-coil-helix domain containing 1
chr14	20760858	20761113	+	20760858	20761096	A3SS	0.5	50	50	ENSMUST00000022358.9	ENSMUSG00000021819.12	Zswim8	chr14	protein_coding	zinc finger SWIM-type containing 8
chr14	20772647	20772964	+	20772647	20772896	A3SS	0.5	50	50	ENSMUST00000022358.9	ENSMUSG00000021819.12	Zswim8	chr14	protein_coding	zinc finger SWIM-type containing 8
chr14	20766130	20766290	+	20766151	20766290	A5SS	0.5	50	50	ENSMUST00000022358.9	ENSMUSG00000021819.12	Zswim8	chr14	protein_coding	zinc finger SWIM-type containing 8
chr14	20772121	20772211	+	20772097	20772211	A5SS	0.5	50	50	ENSMUST00000022358.9	ENSMUSG00000021819.12	Zswim8	chr14	protein_coding	zinc finger SWIM-type containing 8
chr14	20777441	20777555	-	20777428	20777555	A3SS	0.5	50	50	ENSMUST00000223679.2	ENSMUSG00000039308.7	Ndst2	chr14	protein_coding	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
chr14	20778254	20778519	-	20778329	20778519	A3SS	0.5	50	50	ENSMUST00000223679.2	ENSMUSG00000039308.7	Ndst2	chr14	protein_coding	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
chr14	20774631	20774816	-	20774631	20774779	A5SS	0.5	50	50	ENSMUST00000223679.2	ENSMUSG00000039308.7	Ndst2	chr14	protein_coding	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
chr14	20780545	20780975	-	20780545	20783618	A5SS	0.5	50	50	ENSMUST00000223679.2	ENSMUSG00000039308.7	Ndst2	chr14	protein_coding	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
chr14	20814336	20815464	-	20814336;20815023	20814929;20815464	ES	0.5	50	50	ENSMUST00000100837.11	ENSMUSG00000021820.19	Camk2g	chr14	protein_coding	calcium/calmodulin-dependent protein kinase II gamma
chr14	20820197	20829272	-	20820197;20821129	20821075;20829272	ES	0.5	50	50	ENSMUST00000100837.11	ENSMUSG00000021820.19	Camk2g	chr14	protein_coding	calcium/calmodulin-dependent protein kinase II gamma
chr14	20789470;20791559	20791446;20792773	-	20789470	20792773	cassetteExon	0.5	100	100	ENSMUST00000100837.11	ENSMUSG00000021820.19	Camk2g	chr14	protein_coding	calcium/calmodulin-dependent protein kinase II gamma
chr14	20794716;20795928	20795860;20805727	-	20794716	20805727	cassetteExon	0.5	100	100	ENSMUST00000100837.11	ENSMUSG00000021820.19	Camk2g	chr14	protein_coding	calcium/calmodulin-dependent protein kinase II gamma
chr14	20794716;20797919	20797887;20805727	-	20794716	20805727	cassetteExon	0.5	100	100	ENSMUST00000100837.11	ENSMUSG00000021820.19	Camk2g	chr14	protein_coding	calcium/calmodulin-dependent protein kinase II gamma
chr14	20805770;20807796	20807734;20810212	-	20805770	20810212	cassetteExon	0.5	100	100	ENSMUST00000100837.11	ENSMUSG00000021820.19	Camk2g	chr14	protein_coding	calcium/calmodulin-dependent protein kinase II gamma
chr14	20786920	20787343	-	20786920	20787327	A5SS	0.5	50	50	ENSMUST00000100837.11	ENSMUSG00000021820.19	Camk2g	chr14	protein_coding	calcium/calmodulin-dependent protein kinase II gamma
chr14	20787571	20788909	-	20787571	20788917	A5SS	0.5	50	50	ENSMUST00000100837.11	ENSMUSG00000021820.19	Camk2g	chr14	protein_coding	calcium/calmodulin-dependent protein kinase II gamma
chr14	20810548	20814220	-	20810548	20814214	A5SS	0.5	50	50	ENSMUST00000100837.11	ENSMUSG00000021820.19	Camk2g	chr14	protein_coding	calcium/calmodulin-dependent protein kinase II gamma
chr14	20829331	20841001	-	20829331	20842587	A5SS	0.5	50	50	ENSMUST00000100837.11	ENSMUSG00000021820.19	Camk2g	chr14	protein_coding	calcium/calmodulin-dependent protein kinase II gamma
chr14	20794716	20797887	-	20794716;20795928	20795860;20797887	ES	0.5	50	50	ENSMUST00000071816.7	ENSMUSG00000021820.19	Camk2g	chr14	protein_coding	calcium/calmodulin-dependent protein kinase II gamma
chr14	20795928	20805727	-	20795928;20797919	20797887;20805727	ES	0.33	50	50	ENSMUST00000071816.7	ENSMUSG00000021820.19	Camk2g	chr14	protein_coding	calcium/calmodulin-dependent protein kinase II gamma
chr14	20794716;20797919	20797887;20805727	-	20794716;20795928	20795860;20805727	MXE	0.5	100	100	ENSMUST00000080440.14	ENSMUSG00000021820.19	Camk2g	chr14	protein_coding	calcium/calmodulin-dependent protein kinase II gamma
chr14	20814336	20815464	-	20814336	20814929	5pMXE	0.5	50	50	ENSMUST00000223712.2	ENSMUSG00000021820.19	Camk2g	chr14	protein_coding	calcium/calmodulin-dependent protein kinase II gamma
chr14	20789470	20792773	-	20791559	20792773	3pMXE	0.5	50	50	ENSMUST00000225463.2	ENSMUSG00000021820.19	Camk2g	chr14	protein_coding	calcium/calmodulin-dependent protein kinase II gamma
chr14	20887203	20887653	+	20887203	20887678	A3SS	0.5	50	50	ENSMUST00000022368.4	ENSMUSG00000021822.4	Plau	chr14	protein_coding	plasminogen activator, urokinase
chr14	21074359	21077151	+	21074359	21079244	A3SS	0.5	50	50	ENSMUST00000022369.9	ENSMUSG00000021823.11	Vcl	chr14	protein_coding	vinculin
chr14	21091158	21095556	-	21091158;21094892	21094721;21095556	ES	0.5	50	50	ENSMUST00000154460.8	ENSMUSG00000021824.14	Ap3m1	chr14	protein_coding	adaptor-related protein complex 3, mu 1 subunit
chr14	21095831	21102523	-	21095831	21102208	5pMXE	0.33	50	50	ENSMUST00000154460.8	ENSMUSG00000021824.14	Ap3m1	chr14	protein_coding	adaptor-related protein complex 3, mu 1 subunit
chr14	21091158	21094883	-	21091158	21094721	A5SS	0.25	50	50	ENSMUST00000154460.8	ENSMUSG00000021824.14	Ap3m1	chr14	protein_coding	adaptor-related protein complex 3, mu 1 subunit
chr14	21095831	21101964	-	21095831	21102208	A5SS	0.33	50	50	ENSMUST00000154460.8	ENSMUSG00000021824.14	Ap3m1	chr14	protein_coding	adaptor-related protein complex 3, mu 1 subunit
chr14	21091158	21095556	-	21091158;21094892	21094883;21095556	ES	0.5	50	50	ENSMUST00000022371.10	ENSMUSG00000021824.14	Ap3m1	chr14	protein_coding	adaptor-related protein complex 3, mu 1 subunit
chr14	21090205;21091158	21091021;21102208	-	21090205	21102208	cassetteExon	0.5	100	100	ENSMUST00000224016.2	ENSMUSG00000021824.14	Ap3m1	chr14	protein_coding	adaptor-related protein complex 3, mu 1 subunit
chr14	21095831	21102208	-	21090205	21102208	A3SS	0.33	50	50	ENSMUST00000224016.2	ENSMUSG00000021824.14	Ap3m1	chr14	protein_coding	adaptor-related protein complex 3, mu 1 subunit
chr14	21091158	21102208	-	21091158;21095831	21095556;21102208	ES	0.33	50	50	ENSMUST00000126536.8	ENSMUSG00000021824.14	Ap3m1	chr14	protein_coding	adaptor-related protein complex 3, mu 1 subunit
chr14	21091158	21094721	-	21091158	21102208	A5SS	0.25	50	50	ENSMUST00000156716.2	ENSMUSG00000021824.14	Ap3m1	chr14	protein_coding	adaptor-related protein complex 3, mu 1 subunit
chr14	21091158	21094883	-	21091158	21102208	A5SS	0.25	50	50	ENSMUST00000156716.2	ENSMUSG00000021824.14	Ap3m1	chr14	protein_coding	adaptor-related protein complex 3, mu 1 subunit
chr14	21095831	21102523	-	21095831	21101964	5pMXE	0.33	50	50	ENSMUST00000148886.2	ENSMUSG00000021824.14	Ap3m1	chr14	protein_coding	adaptor-related protein complex 3, mu 1 subunit
chr14	21091158	21095556	-	21094892	21095556	3pMXE	0.5	50	50	ENSMUST00000130370.3	ENSMUSG00000021824.14	Ap3m1	chr14	protein_coding	adaptor-related protein complex 3, mu 1 subunit
chr14	21290639	21419139	+	21290639;21368251	21368081;21419139	ES	0.5	50	50	ENSMUST00000045376.11	ENSMUSG00000039197.11	Adk	chr14	protein_coding	adenosine kinase
chr14	21102768;21104084	21103790;21142435	+	21102768	21142435	cassetteExon	0.5	100	100	ENSMUST00000045376.11	ENSMUSG00000039197.11	Adk	chr14	protein_coding	adenosine kinase
chr14	21102768;21104084	21104013;21142435	+	21102768	21142435	cassetteExon	0.5	100	100	ENSMUST00000045376.11	ENSMUSG00000039197.11	Adk	chr14	protein_coding	adenosine kinase
chr14	21368251	21376660	+	21368251	21419139	A3SS	0.5	50	50	ENSMUST00000045376.11	ENSMUSG00000039197.11	Adk	chr14	protein_coding	adenosine kinase
chr14	21419174	21419807	+	21419174	21431571	A3SS	0.5	50	50	ENSMUST00000045376.11	ENSMUSG00000039197.11	Adk	chr14	protein_coding	adenosine kinase
chr14	21126389	21142435	+	21102768	21142435	A5SS	0.33	50	50	ENSMUST00000045376.11	ENSMUSG00000039197.11	Adk	chr14	protein_coding	adenosine kinase
chr14	21102768	21104013	+	21102768	21103790	3pMXE	0.33	50	50	ENSMUST00000223558.2	ENSMUSG00000039197.11	Adk	chr14	protein_coding	adenosine kinase
chr14	21102768	21142435	+	21102768	21103790	3pMXE	0.33	50	50	ENSMUST00000223558.2	ENSMUSG00000039197.11	Adk	chr14	protein_coding	adenosine kinase
chr14	21290639	21419139	+	21290639	21368081	3pMXE	0.5	50	50	ENSMUST00000225742.2	ENSMUSG00000039197.11	Adk	chr14	protein_coding	adenosine kinase
chr14	21102768	21142435	+	21102768	21104013	3pMXE	0.33	50	50	ENSMUST00000223641.2	ENSMUSG00000039197.11	Adk	chr14	protein_coding	adenosine kinase
chr14	21102768	21142435	+	21104084	21142435	5pMXE	0.33	50	50	ENSMUST00000224899.2	ENSMUSG00000039197.11	Adk	chr14	protein_coding	adenosine kinase
chr14	21126389	21142435	+	21104084	21142435	A5SS	0.33	50	50	ENSMUST00000224899.2	ENSMUSG00000039197.11	Adk	chr14	protein_coding	adenosine kinase
chr14	21531621	21580324	+	21531621	21566694	3pMXE	0.5	50	50	ENSMUST00000182996.2	ENSMUSG00000021767.20	Kat6b	chr14	protein_coding	K(lysine) acetyltransferase 6B
chr14	21549889	21566694	+	21531621	21566694	A5SS	0.25	50	50	ENSMUST00000182996.2	ENSMUSG00000021767.20	Kat6b	chr14	protein_coding	K(lysine) acetyltransferase 6B
chr14	21550028	21566694	+	21531621	21566694	A5SS	0.25	50	50	ENSMUST00000182996.2	ENSMUSG00000021767.20	Kat6b	chr14	protein_coding	K(lysine) acetyltransferase 6B
chr14	21551146	21566694	+	21531621	21566694	A5SS	0.25	50	50	ENSMUST00000182996.2	ENSMUSG00000021767.20	Kat6b	chr14	protein_coding	K(lysine) acetyltransferase 6B
chr14	21567566	21659822	+	21580433	21659822	A5SS&ES	0.5	50	50	ENSMUST00000183201.8	ENSMUSG00000021767.20	Kat6b	chr14	protein_coding	K(lysine) acetyltransferase 6B
chr14	21669078	21669286	+	21669074	21669286	A5SS	0.5	50	50	ENSMUST00000183201.8	ENSMUSG00000021767.20	Kat6b	chr14	protein_coding	K(lysine) acetyltransferase 6B
chr14	21550028	21566694	+	21549889	21566694	A5SS	0.25	50	50	ENSMUST00000182855.8	ENSMUSG00000021767.20	Kat6b	chr14	protein_coding	K(lysine) acetyltransferase 6B
chr14	21551146	21566694	+	21549889	21566694	A5SS	0.25	50	50	ENSMUST00000182855.8	ENSMUSG00000021767.20	Kat6b	chr14	protein_coding	K(lysine) acetyltransferase 6B
chr14	21675283	21676787	+	21674956	21676787	A5SS	0.33	50	50	ENSMUST00000182855.8	ENSMUSG00000021767.20	Kat6b	chr14	protein_coding	K(lysine) acetyltransferase 6B
chr14	21675829	21676787	+	21674956	21676787	A5SS	0.33	50	50	ENSMUST00000182855.8	ENSMUSG00000021767.20	Kat6b	chr14	protein_coding	K(lysine) acetyltransferase 6B
chr14	21551146	21566694	+	21550028	21566694	A5SS	0.25	50	50	ENSMUST00000182405.9	ENSMUSG00000021767.20	Kat6b	chr14	protein_coding	K(lysine) acetyltransferase 6B
chr14	21675829	21676787	+	21675283	21676787	A5SS	0.33	50	50	ENSMUST00000069648.14	ENSMUSG00000021767.20	Kat6b	chr14	protein_coding	K(lysine) acetyltransferase 6B
chr14	21735117	21736683	-	21727228	21736683	A3SS	0.5	50	50	ENSMUST00000073870.7	ENSMUSG00000063821.7	Dupd1	chr14	protein_coding	dual specificity phosphatase and pro isomerase domain containing 1
chr14	21790345	21792730	-	21790345	21791496	5pMXE	0.14	50	50	ENSMUST00000184703.8	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21790345	21793503	-	21790345	21791496	5pMXE	0.14	50	50	ENSMUST00000184703.8	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21790345	21794816	-	21790345	21791496	5pMXE	0.14	50	50	ENSMUST00000184703.8	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21790345	21797489	-	21790345	21791496	5pMXE	0.14	50	50	ENSMUST00000184703.8	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21790345	21798514	-	21790345	21791496	5pMXE	0.14	50	50	ENSMUST00000184703.8	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21790345;21791186	21791098;21791496	-	21790345	21791496	cassetteExon	0.5	100	100	ENSMUST00000184703.8	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21790345	21792730	-	21790345	21791098	5pMXE	0.14	50	50	ENSMUST00000119866.9	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21790345	21793503	-	21790345	21791098	5pMXE	0.14	50	50	ENSMUST00000119866.9	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21790345	21794816	-	21790345	21791098	5pMXE	0.14	50	50	ENSMUST00000119866.9	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21790345	21797489	-	21790345	21791098	5pMXE	0.14	50	50	ENSMUST00000119866.9	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21790345	21798514	-	21790345	21791098	5pMXE	0.14	50	50	ENSMUST00000119866.9	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21790345	21791496	-	21790345	21791098	A5SS	0.14	50	50	ENSMUST00000119866.9	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21790345	21793503	-	21790345	21792730	5pMXE	0.14	50	50	ENSMUST00000120956.8	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21790345	21794816	-	21790345	21792730	5pMXE	0.14	50	50	ENSMUST00000120956.8	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21790345	21797489	-	21790345	21792730	5pMXE	0.14	50	50	ENSMUST00000120956.8	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21790345	21798514	-	21790345	21792730	5pMXE	0.14	50	50	ENSMUST00000120956.8	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21790345	21798514	-	21790345;21793597	21793503;21798514	ES	0.2	50	50	ENSMUST00000184571.8	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21790345;21795010	21794816;21798514	-	21790345;21793597	21793503;21798514	MXE	0.5	100	100	ENSMUST00000184571.8	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21793597;21795010	21794816;21798514	-	21793597	21798514	cassetteExon	0.5	100	100	ENSMUST00000184571.8	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21790345;21797706	21797489;21798514	-	21790345;21793597	21793503;21798514	MXE	0.5	100	100	ENSMUST00000184571.8	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21796585	21798514	-	21793597	21798514	A3SS	0.2	50	50	ENSMUST00000184571.8	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21790345	21794816	-	21790345;21793597	21793503;21794816	ES	0.5	50	50	ENSMUST00000075040.9	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21795010	21797489	-	21795010;21796585	21796378;21797489	ES	0.33	50	50	ENSMUST00000075040.9	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21796585	21798514	-	21796585;21797706	21797489;21798514	ES	0.2	50	50	ENSMUST00000075040.9	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21797706	21801104	-	21797706	21798514	5pMXE	0.5	50	50	ENSMUST00000075040.9	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21795010	21798514	-	21795010;21797706	21797489;21798514	ES	0.2	50	50	ENSMUST00000127851.9	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21795010;21796585	21796378;21798514	-	21795010;21797706	21797489;21798514	MXE	0.5	100	100	ENSMUST00000127851.9	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21795010;21796585	21796378;21798514	-	21795010	21798514	cassetteExon	0.5	100	100	ENSMUST00000183893.2	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21790345;21797706	21797489;21798514	-	21790345;21795010	21793503;21798514	MXE	0.5	100	100	ENSMUST00000183893.2	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21790345;21795010	21794816;21798514	-	21790345	21798514	cassetteExon	0.5	100	100	ENSMUST00000183943.2	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21790345;21797706	21797489;21798514	-	21790345	21798514	cassetteExon	0.5	100	100	ENSMUST00000183943.2	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21796585	21798514	-	21790345	21798514	A3SS	0.2	50	50	ENSMUST00000183943.2	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21790345;21795010	21794816;21797489	-	21790345	21797489	cassetteExon	0.5	100	100	ENSMUST00000183824.8	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21790345;21795010	21794816;21798514	-	21790345;21797706	21797489;21798514	MXE	0.5	100	100	ENSMUST00000183824.8	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21796585	21797489	-	21790345	21797489	A3SS	0.33	50	50	ENSMUST00000183824.8	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21796585	21798514	-	21797706	21798514	A3SS&ES	0.2	50	50	ENSMUST00000183824.8	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21795010	21797489	-	21795010	21796378	5pMXE	0.33	50	50	ENSMUST00000153071.8	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21795010	21798514	-	21795010	21796378	5pMXE	0.33	50	50	ENSMUST00000153071.8	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21790345	21794816	-	21793597	21794816	3pMXE	0.5	50	50	ENSMUST00000185042.2	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21796585	21798514	-	21796585	21797489	A5SS&ES	0.5	50	50	ENSMUST00000127051.4	ENSMUSG00000021768.16	Dusp13	chr14	protein_coding	dual specificity phosphatase 13
chr14	21791811;21792878	21792807;21796081	+	21791811	21796081	cassetteExon	0.5	100	100	ENSMUST00000142076.2	ENSMUSG00000084940.3	Gm15935	chr14	lncRNA	predicted gene 15935
chr14	21800904	21825031	+	21800848	21825031	A5SS	0.33	50	50	ENSMUST00000022292.10	ENSMUSG00000021770.12	Samd8	chr14	protein_coding	sterile alpha motif domain containing 8
chr14	21801672	21825031	+	21800848	21825031	A5SS	0.33	50	50	ENSMUST00000022292.10	ENSMUSG00000021770.12	Samd8	chr14	protein_coding	sterile alpha motif domain containing 8
chr14	21801672	21825031	+	21800904	21825031	A5SS	0.33	50	50	ENSMUST00000144061.2	ENSMUSG00000021770.12	Samd8	chr14	protein_coding	sterile alpha motif domain containing 8
chr14	21881735	21881919	+	21875416	21881919	A5SS	0.5	50	50	ENSMUST00000224373.2	ENSMUSG00000021771.15	Vdac2	chr14	protein_coding	voltage-dependent anion channel 2
chr14	21881735	21882952	+	21881977	21882952	A5SS&ES	0.5	50	50	ENSMUST00000224373.2	ENSMUSG00000021771.15	Vdac2	chr14	protein_coding	voltage-dependent anion channel 2
chr14	21881735	21882952	+	21881735;21881977	21881919;21882952	ES	0.5	50	50	ENSMUST00000022293.14	ENSMUSG00000021771.15	Vdac2	chr14	protein_coding	voltage-dependent anion channel 2
chr14	21899805	21903902	+	21899805	21900539	3pMXE	0.5	50	50	ENSMUST00000170150.9	ENSMUSG00000090564.10	A430057M04Rik	chr14	lncRNA	RIKEN cDNA A430057M04 gene
chr14	22646610;22734960	22734897;23106023	+	22646610;22878850	22878757;23106023	MXE	0.5	100	100	ENSMUST00000075639.11	ENSMUSG00000063458.14	Lrmda	chr14	protein_coding	leucine rich melanocyte differentiation associated
chr14	22646610	22648202	+	22646610	22878757	A3SS	0.25	50	50	ENSMUST00000075639.11	ENSMUSG00000063458.14	Lrmda	chr14	protein_coding	leucine rich melanocyte differentiation associated
chr14	22646610	22766265	+	22646610	22878757	A3SS	0.25	50	50	ENSMUST00000075639.11	ENSMUSG00000063458.14	Lrmda	chr14	protein_coding	leucine rich melanocyte differentiation associated
chr14	22459102	22627916	+	22077395	22627916	A5SS	0.5	50	50	ENSMUST00000075639.11	ENSMUSG00000063458.14	Lrmda	chr14	protein_coding	leucine rich melanocyte differentiation associated
chr14	22077395	22627916	+	22077395	22646493	A3SS	0.5	50	50	ENSMUST00000161249.8	ENSMUSG00000063458.14	Lrmda	chr14	protein_coding	leucine rich melanocyte differentiation associated
chr14	22646610	22734897	+	22646610	22878757	A3SS	0.25	50	50	ENSMUST00000161249.8	ENSMUSG00000063458.14	Lrmda	chr14	protein_coding	leucine rich melanocyte differentiation associated
chr14	22634613	22646493	+	22077395	22646493	A5SS	0.5	50	50	ENSMUST00000161249.8	ENSMUSG00000063458.14	Lrmda	chr14	protein_coding	leucine rich melanocyte differentiation associated
chr14	22646610	22648202	+	22646610	22766265	A3SS	0.25	50	50	ENSMUST00000159777.8	ENSMUSG00000063458.14	Lrmda	chr14	protein_coding	leucine rich melanocyte differentiation associated
chr14	22646610	22734897	+	22646610	22766265	A3SS	0.25	50	50	ENSMUST00000159777.8	ENSMUSG00000063458.14	Lrmda	chr14	protein_coding	leucine rich melanocyte differentiation associated
chr14	22646610	22648202	+	22646610	22734897	A3SS	0.25	50	50	ENSMUST00000162540.2	ENSMUSG00000063458.14	Lrmda	chr14	protein_coding	leucine rich melanocyte differentiation associated
chr14	22581833	22584638	-	22581266	22584638	A3SS	0.5	50	50	ENSMUST00000225327.2	ENSMUSG00000114412.2	4930405A10Rik	chr14	lncRNA	RIKEN cDNA 4930405A10 gene
chr14	23436421	23486018	-	23436421;23475817	23475635;23486018	ES	0.14	50	50	ENSMUST00000172099.9	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23513278	23551193	-	23513278;23544762	23544607;23551193	ES	0.5	50	50	ENSMUST00000172099.9	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23700254	24053816	-	23700254	23853208	5pMXE	0.25	50	50	ENSMUST00000172099.9	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23381038;23386188	23386108;23387013	-	23381038	23387013	cassetteExon	0.5	100	100	ENSMUST00000172099.9	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23436421;23437168	23437160;23486018	-	23436421;23475817	23475635;23486018	MXE	0.5	100	100	ENSMUST00000172099.9	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23436421;23441075	23440989;23486018	-	23436421;23475817	23475635;23486018	MXE	0.5	100	100	ENSMUST00000172099.9	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23436421;23452946	23452938;23486018	-	23436421;23475817	23475635;23486018	MXE	0.5	100	100	ENSMUST00000172099.9	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23436421;23482309	23482301;23486018	-	23436421;23475817	23475635;23486018	MXE	0.5	100	100	ENSMUST00000172099.9	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23559968;23576695	23576604;23576793	-	23559968	23576793	cassetteExon	0.5	100	100	ENSMUST00000172099.9	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23559968;23576695	23576604;23578418	-	23559968;23576884	23576793;23578418	MXE	0.5	100	100	ENSMUST00000172099.9	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23350110	23359108	-	23339520	23359108	A3SS	0.25	50	50	ENSMUST00000172099.9	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23350113	23359108	-	23339520	23359108	A3SS	0.25	50	50	ENSMUST00000172099.9	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23356821	23359108	-	23339520	23359108	A3SS	0.25	50	50	ENSMUST00000172099.9	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23475808	23486018	-	23475817	23486018	A3SS	0.14	50	50	ENSMUST00000172099.9	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23492147	23501667	-	23492159	23501667	A3SS	0.33	50	50	ENSMUST00000172099.9	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23499279	23501667	-	23492159	23501667	A3SS	0.33	50	50	ENSMUST00000172099.9	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23521492	23544607	-	23513278	23544607	A3SS	0.5	50	50	ENSMUST00000172099.9	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23436421	23486009	-	23436421	23475635	A5SS&ES	0.14	50	50	ENSMUST00000172099.9	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23593174	23593311	-	23593174	23640709	A5SS	0.33	50	50	ENSMUST00000172099.9	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23593174	23604435	-	23593174	23640709	A5SS	0.33	50	50	ENSMUST00000172099.9	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23700254	23781902	-	23700254	23853208	A5SS	0.25	50	50	ENSMUST00000172099.9	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23700254	23782861	-	23700254	23853208	A5SS	0.25	50	50	ENSMUST00000172099.9	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23436421	23486018	-	23436421;23475808	23475635;23486018	ES	0.14	50	50	ENSMUST00000179836.8	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23436421;23437168	23437160;23486018	-	23436421;23475808	23475635;23486018	MXE	0.5	100	100	ENSMUST00000179836.8	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23436421;23441075	23440989;23486018	-	23436421;23475808	23475635;23486018	MXE	0.5	100	100	ENSMUST00000179836.8	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23436421;23452946	23452938;23486018	-	23436421;23475808	23475635;23486018	MXE	0.5	100	100	ENSMUST00000179836.8	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23436421;23482309	23482301;23486018	-	23436421;23475808	23475635;23486018	MXE	0.5	100	100	ENSMUST00000179836.8	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23475808;23482309	23482301;23486018	-	23475808	23486018	cassetteExon	0.5	100	100	ENSMUST00000179836.8	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23492147;23499279	23499268;23501667	-	23492147	23501667	cassetteExon	0.5	100	100	ENSMUST00000179836.8	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23700254	24053816	-	23700254;23853369	23853208;24053816	ES	0.33	50	50	ENSMUST00000145596.3	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23853369	24064446	-	23853369	24053816	5pMXE	0.5	50	50	ENSMUST00000145596.3	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23350113;23356821	23356793;23359108	-	23350113	23359108	cassetteExon	0.5	100	100	ENSMUST00000145596.3	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23436421;23437168	23437160;23486018	-	23436421	23486018	cassetteExon	0.5	100	100	ENSMUST00000145596.3	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23436421;23441075	23440989;23486018	-	23436421	23486018	cassetteExon	0.5	100	100	ENSMUST00000145596.3	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23436421;23452946	23452938;23486018	-	23436421	23486018	cassetteExon	0.5	100	100	ENSMUST00000145596.3	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23436421;23482309	23482301;23486018	-	23436421	23486018	cassetteExon	0.5	100	100	ENSMUST00000145596.3	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23350110	23359108	-	23350113	23359108	A3SS	0.25	50	50	ENSMUST00000145596.3	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	24053062	24053816	-	23853369	24053816	A3SS	0.33	50	50	ENSMUST00000145596.3	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23436421	23486009	-	23436421	23486018	A5SS	0.14	50	50	ENSMUST00000145596.3	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23350110	23359108	-	23350110;23356821	23356793;23359108	ES	0.33	50	50	ENSMUST00000065788.15	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23436421;23441075	23440989;23486018	-	23436421;23437168	23437160;23486018	MXE	0.5	100	100	ENSMUST00000065788.15	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23436421;23452946	23452938;23486018	-	23436421;23437168	23437160;23486018	MXE	0.5	100	100	ENSMUST00000065788.15	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23436421;23482309	23482301;23486018	-	23436421;23437168	23437160;23486018	MXE	0.5	100	100	ENSMUST00000065788.15	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23350113	23356793	-	23350110	23356793	A3SS	0.5	50	50	ENSMUST00000065788.15	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23350113	23359108	-	23356821	23359108	A3SS&ES	0.33	50	50	ENSMUST00000065788.15	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23436421	23486009	-	23436421	23437160	A5SS&ES	0.14	50	50	ENSMUST00000065788.15	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23436421;23441075	23440989;23486018	-	23436421;23452946	23452938;23486018	MXE	0.5	100	100	ENSMUST00000112423.10	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23436421;23482309	23482301;23486018	-	23436421;23452946	23452938;23486018	MXE	0.5	100	100	ENSMUST00000112423.10	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23350110	23359108	-	23356821	23359108	A3SS&ES	0.33	50	50	ENSMUST00000112423.10	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23436421	23486009	-	23436421	23452938	A5SS&ES	0.14	50	50	ENSMUST00000112423.10	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23436421;23441075	23440989;23486018	-	23436421;23482309	23482301;23486018	MXE	0.5	100	100	ENSMUST00000224787.2	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23436421;23475808	23475635;23482301	-	23436421	23482301	cassetteExon	0.5	100	100	ENSMUST00000224787.2	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	24053062	24053816	-	23700254	24053816	A3SS	0.33	50	50	ENSMUST00000224787.2	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23436421	23486009	-	23436421	23482301	A5SS&ES	0.14	50	50	ENSMUST00000224787.2	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23700254	23781902	-	23700254	24053816	A5SS	0.25	50	50	ENSMUST00000224787.2	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23700254	23782861	-	23700254	24053816	A5SS	0.25	50	50	ENSMUST00000224787.2	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23436421	23486009	-	23436421	23440989	A5SS&ES	0.14	50	50	ENSMUST00000225315.2	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23576695	23578418	-	23576695;23576884	23576793;23578418	ES	0.5	50	50	ENSMUST00000225794.2	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23436421;23437168	23437160;23486018	-	23436421;23482309	23475635;23486018	MXE	0.5	100	100	ENSMUST00000224077.2	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23436421;23441075	23440989;23486018	-	23436421;23482309	23475635;23486018	MXE	0.5	100	100	ENSMUST00000224077.2	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23436421;23452946	23452938;23486018	-	23436421;23482309	23475635;23486018	MXE	0.5	100	100	ENSMUST00000224077.2	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23475817	23486018	-	23482309	23486018	A3SS&ES	0.14	50	50	ENSMUST00000224077.2	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23593174	23593311	-	23593174	23604435	A5SS	0.33	50	50	ENSMUST00000212542.2	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23700254	23781902	-	23700254	23782861	A5SS	0.25	50	50	ENSMUST00000224933.2	ENSMUSG00000063142.16	Kcnma1	chr14	protein_coding	potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr14	23610378	23614406	+	23610488	23614406	A5SS	0.5	50	50	ENSMUST00000191517.2	ENSMUSG00000100100.2	Gm29626	chr14	lncRNA	predicted gene 29626
chr14	24055205	24055363	+	24055205	24055444	A3SS	0.5	50	50	ENSMUST00000223609.2	ENSMUSG00000114953.2	4930519K11Rik	chr14	lncRNA	RIKEN cDNA 4930519K11 gene
chr14	24055522	24055749	+	24055522	24055977	A3SS	0.5	50	50	ENSMUST00000223609.2	ENSMUSG00000114953.2	4930519K11Rik	chr14	lncRNA	RIKEN cDNA 4930519K11 gene
chr14	24186746;24187307	24187198;24188305	-	24186746	24188305	cassetteExon	0.5	100	100	ENSMUST00000166007.8	ENSMUSG00000021782.15	Dlg5	chr14	protein_coding	discs large MAGUK scaffold protein 5
chr14	24199537	24200207	-	24199580	24200207	A3SS	0.5	50	50	ENSMUST00000042009.13	ENSMUSG00000021782.15	Dlg5	chr14	protein_coding	discs large MAGUK scaffold protein 5
chr14	24214202	24214466	-	24214202	24214451	A5SS	0.5	50	50	ENSMUST00000042009.13	ENSMUSG00000021782.15	Dlg5	chr14	protein_coding	discs large MAGUK scaffold protein 5
chr14	24243022;24252434	24252366;24295215	-	24243022	24295215	cassetteExon	0.5	100	100	ENSMUST00000073687.13	ENSMUSG00000021782.15	Dlg5	chr14	protein_coding	discs large MAGUK scaffold protein 5
chr14	24252434	24294880	-	24252434	24295215	A5SS	0.5	50	50	ENSMUST00000090398.11	ENSMUSG00000021782.15	Dlg5	chr14	protein_coding	discs large MAGUK scaffold protein 5
chr14	24348165	24356882	+	24348165	24356894	A3SS	0.5	50	50	ENSMUST00000162224.8	ENSMUSG00000038925.16	E330034G19Rik	chr14	transcribed_unprocessed_pseudogene	RIKEN cDNA E330034G19 gene
chr14	24343655	24346065	+	24343375	24346065	A5SS	0.33	50	50	ENSMUST00000162224.8	ENSMUSG00000038925.16	E330034G19Rik	chr14	transcribed_unprocessed_pseudogene	RIKEN cDNA E330034G19 gene
chr14	24344779	24346065	+	24343375	24346065	A5SS	0.33	50	50	ENSMUST00000162224.8	ENSMUSG00000038925.16	E330034G19Rik	chr14	transcribed_unprocessed_pseudogene	RIKEN cDNA E330034G19 gene
chr14	24343655	24346077	+	24343655	24346065	A3SS	0.5	50	50	ENSMUST00000239244.2	ENSMUSG00000038925.16	E330034G19Rik	chr14	transcribed_unprocessed_pseudogene	RIKEN cDNA E330034G19 gene
chr14	24344779	24346065	+	24343655	24346065	A5SS	0.33	50	50	ENSMUST00000239244.2	ENSMUSG00000038925.16	E330034G19Rik	chr14	transcribed_unprocessed_pseudogene	RIKEN cDNA E330034G19 gene
chr14	24519511	24520602	-	24519497	24520602	A3SS	0.5	50	50	ENSMUST00000026322.9	ENSMUSG00000025280.9	Polr3a	chr14	protein_coding	polymerase (RNA) III (DNA directed) polypeptide A
chr14	24540826	24541818	+	24537266	24541818	A5SS	0.2	50	50	ENSMUST00000223931.2	ENSMUSG00000025290.18	Rps24	chr14	protein_coding	ribosomal protein S24
chr14	24541092	24541818	+	24537266	24541818	A5SS	0.2	50	50	ENSMUST00000223931.2	ENSMUSG00000025290.18	Rps24	chr14	protein_coding	ribosomal protein S24
chr14	24541258	24541818	+	24537266	24541818	A5SS	0.2	50	50	ENSMUST00000223931.2	ENSMUSG00000025290.18	Rps24	chr14	protein_coding	ribosomal protein S24
chr14	24541529	24541818	+	24537266	24541818	A5SS	0.2	50	50	ENSMUST00000223931.2	ENSMUSG00000025290.18	Rps24	chr14	protein_coding	ribosomal protein S24
chr14	24543561	24545843	+	24543561	24545498	3pMXE	0.25	50	50	ENSMUST00000112384.10	ENSMUSG00000025290.18	Rps24	chr14	protein_coding	ribosomal protein S24
chr14	24543561;24544137	24543685;24545498	+	24543561	24545498	cassetteExon	0.5	100	100	ENSMUST00000112384.10	ENSMUSG00000025290.18	Rps24	chr14	protein_coding	ribosomal protein S24
chr14	24543561;24544137	24544120;24545498	+	24543561	24545498	cassetteExon	0.5	100	100	ENSMUST00000112384.10	ENSMUSG00000025290.18	Rps24	chr14	protein_coding	ribosomal protein S24
chr14	24541092	24541818	+	24540826	24541818	A5SS	0.2	50	50	ENSMUST00000112384.10	ENSMUSG00000025290.18	Rps24	chr14	protein_coding	ribosomal protein S24
chr14	24541258	24541818	+	24540826	24541818	A5SS	0.2	50	50	ENSMUST00000112384.10	ENSMUSG00000025290.18	Rps24	chr14	protein_coding	ribosomal protein S24
chr14	24541529	24541818	+	24540826	24541818	A5SS	0.2	50	50	ENSMUST00000112384.10	ENSMUSG00000025290.18	Rps24	chr14	protein_coding	ribosomal protein S24
chr14	24543561	24545843	+	24543561;24545517	24545498;24545843	ES	0.5	50	50	ENSMUST00000169826.3	ENSMUSG00000025290.18	Rps24	chr14	protein_coding	ribosomal protein S24
chr14	24543561	24543685	+	24543561	24545843	A3SS	0.25	50	50	ENSMUST00000225023.2	ENSMUSG00000025290.18	Rps24	chr14	protein_coding	ribosomal protein S24
chr14	24543561	24544120	+	24543561	24545843	A3SS	0.25	50	50	ENSMUST00000225023.2	ENSMUSG00000025290.18	Rps24	chr14	protein_coding	ribosomal protein S24
chr14	24543561	24543685	+	24543561	24544120	A3SS	0.25	50	50	ENSMUST00000223999.2	ENSMUSG00000025290.18	Rps24	chr14	protein_coding	ribosomal protein S24
chr14	24543561	24545498	+	24543561	24543685	3pMXE	0.25	50	50	ENSMUST00000225117.2	ENSMUSG00000025290.18	Rps24	chr14	protein_coding	ribosomal protein S24
chr14	24541258	24541818	+	24541092	24541818	A5SS	0.2	50	50	ENSMUST00000224568.2	ENSMUSG00000025290.18	Rps24	chr14	protein_coding	ribosomal protein S24
chr14	24541529	24541818	+	24541092	24541818	A5SS	0.2	50	50	ENSMUST00000224568.2	ENSMUSG00000025290.18	Rps24	chr14	protein_coding	ribosomal protein S24
chr14	24541258	24541818	+	24541529	24541818	A5SS	0.2	50	50	ENSMUST00000224549.2	ENSMUSG00000025290.18	Rps24	chr14	protein_coding	ribosomal protein S24
chr14	24656926	24667078	-	24656434	24667078	A3SS	0.33	50	50	ENSMUST00000212108.2	ENSMUSG00000048628.6	4930542C16Rik	chr14	lncRNA	RIKEN cDNA 4930542C16 gene
chr14	24665980	24667078	-	24656434	24667078	A3SS	0.33	50	50	ENSMUST00000212108.2	ENSMUSG00000048628.6	4930542C16Rik	chr14	lncRNA	RIKEN cDNA 4930542C16 gene
chr14	24665980	24667078	-	24656926	24667078	A3SS	0.33	50	50	ENSMUST00000159360.2	ENSMUSG00000048628.6	4930542C16Rik	chr14	lncRNA	RIKEN cDNA 4930542C16 gene
chr14	24671077	24678677	+	24671077	24749805	A3SS	0.5	50	50	ENSMUST00000225654.2	ENSMUSG00000089887.3	4930428N03Rik	chr14	lncRNA	RIKEN cDNA 4930428N03 gene
chr14	24669884	24670802	+	24667661	24670802	A5SS	0.5	50	50	ENSMUST00000225654.2	ENSMUSG00000089887.3	4930428N03Rik	chr14	lncRNA	RIKEN cDNA 4930428N03 gene
chr14	24672390	24678677	+	24671077	24678677	A5SS	0.5	50	50	ENSMUST00000224456.2	ENSMUSG00000089887.3	4930428N03Rik	chr14	lncRNA	RIKEN cDNA 4930428N03 gene
chr14	24672390	24678677	+	24672390	24672744	3pMXE	0.5	50	50	ENSMUST00000159744.2	ENSMUSG00000089887.3	4930428N03Rik	chr14	lncRNA	RIKEN cDNA 4930428N03 gene
chr14	25457710	25458169	-	25442474	25458169	A3SS	0.5	50	50	ENSMUST00000225188.2	ENSMUSG00000087535.3	Zmiz1os1	chr14	lncRNA	Zmiz1 opposite strand 1
chr14	25537248;25546333	25546188;25572444	+	25537248	25572444	cassetteExon	0.5	100	100	ENSMUST00000162645.8	ENSMUSG00000007817.16	Zmiz1	chr14	protein_coding	zinc finger, MIZ-type containing 1
chr14	25646281	25647159	+	25646281	25647141	A3SS	0.5	50	50	ENSMUST00000162645.8	ENSMUSG00000007817.16	Zmiz1	chr14	protein_coding	zinc finger, MIZ-type containing 1
chr14	25607894	25636297	+	25582097	25636297	A5SS	0.33	50	50	ENSMUST00000162645.8	ENSMUSG00000007817.16	Zmiz1	chr14	protein_coding	zinc finger, MIZ-type containing 1
chr14	25608636	25636297	+	25582097	25636297	A5SS	0.33	50	50	ENSMUST00000162645.8	ENSMUSG00000007817.16	Zmiz1	chr14	protein_coding	zinc finger, MIZ-type containing 1
chr14	25608636	25636297	+	25607894	25636297	A5SS	0.33	50	50	ENSMUST00000160190.2	ENSMUSG00000007817.16	Zmiz1	chr14	protein_coding	zinc finger, MIZ-type containing 1
chr14	25891279	25902705	-	25891279	25903210	A5SS	0.33	50	50	ENSMUST00000052286.16	ENSMUSG00000095304.10	Plac9a	chr14	protein_coding	placenta specific 9a
chr14	25891279	25902803	-	25891279	25903210	A5SS	0.33	50	50	ENSMUST00000052286.16	ENSMUSG00000095304.10	Plac9a	chr14	protein_coding	placenta specific 9a
chr14	25891279	25902803	-	25891279	25902705	A5SS	0.33	50	50	ENSMUST00000183431.8	ENSMUSG00000095304.10	Plac9a	chr14	protein_coding	placenta specific 9a
chr14	25926005	25926114	-	25926005	25926222	A5SS	0.5	50	50	ENSMUST00000185006.9	ENSMUSG00000072676.13	Tmem254a	chr14	protein_coding	transmembrane protein 254a
chr14	25926325	25927469	-	25926325	25927722	A5SS	0.5	50	50	ENSMUST00000185006.9	ENSMUSG00000072676.13	Tmem254a	chr14	protein_coding	transmembrane protein 254a
chr14	25943024	25952340	+	25938818	25952340	A5SS	0.5	50	50	ENSMUST00000183436.2	ENSMUSG00000095975.4	Cphx1	chr14	protein_coding	cytoplasmic polyadenylated homeobox 1
chr14	25980752	25983912	+	25979335	25983912	A5SS	0.33	50	50	ENSMUST00000172465.2	ENSMUSG00000048502.15	Duxbl1	chr14	protein_coding	double homeobox B-like 1
chr14	25980945	25983912	+	25979335	25983912	A5SS	0.33	50	50	ENSMUST00000172465.2	ENSMUSG00000048502.15	Duxbl1	chr14	protein_coding	double homeobox B-like 1
chr14	25980945	25984570	+	25983969	25984570	A5SS&ES	0.5	50	50	ENSMUST00000172667.8	ENSMUSG00000048502.15	Duxbl1	chr14	protein_coding	double homeobox B-like 1
chr14	25980945	25984570	+	25980945;25983969	25983912;25984570	ES	0.5	50	50	ENSMUST00000173580.8	ENSMUSG00000048502.15	Duxbl1	chr14	protein_coding	double homeobox B-like 1
chr14	25980752	25983912	+	25980945	25983912	A5SS	0.5	50	50	ENSMUST00000173580.8	ENSMUSG00000048502.15	Duxbl1	chr14	protein_coding	double homeobox B-like 1
chr14	26094504	26097417	+	26094504;26097319	26097172;26097417	ES	0.5	50	50	ENSMUST00000160661.8	ENSMUSG00000021874.13	4933413J09Rik	chr14	lncRNA	RIKEN cDNA 4933413J09 gene
chr14	26097513	26117192	+	26097513	26104265	3pMXE	0.33	50	50	ENSMUST00000160661.8	ENSMUSG00000021874.13	4933413J09Rik	chr14	lncRNA	RIKEN cDNA 4933413J09 gene
chr14	26097513	26098868	+	26097513	26104265	A3SS	0.33	50	50	ENSMUST00000160661.8	ENSMUSG00000021874.13	4933413J09Rik	chr14	lncRNA	RIKEN cDNA 4933413J09 gene
chr14	26078830	26094126	+	26077864	26094126	A5SS	0.33	50	50	ENSMUST00000160661.8	ENSMUSG00000021874.13	4933413J09Rik	chr14	lncRNA	RIKEN cDNA 4933413J09 gene
chr14	26085582	26094126	+	26077864	26094126	A5SS	0.33	50	50	ENSMUST00000160661.8	ENSMUSG00000021874.13	4933413J09Rik	chr14	lncRNA	RIKEN cDNA 4933413J09 gene
chr14	26097513	26098868	+	26097513	26117192	A3SS	0.33	50	50	ENSMUST00000059648.10	ENSMUSG00000021874.13	4933413J09Rik	chr14	lncRNA	RIKEN cDNA 4933413J09 gene
chr14	26085582	26094126	+	26078830	26094126	A5SS	0.33	50	50	ENSMUST00000059648.10	ENSMUSG00000021874.13	4933413J09Rik	chr14	lncRNA	RIKEN cDNA 4933413J09 gene
chr14	26136143	26139268	-	26136143;26137447	26137358;26139268	ES	0.5	50	50	ENSMUST00000102956.8	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26149471	26159834	-	26149471;26151065	26150943;26159834	ES	0.5	50	50	ENSMUST00000102956.8	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26163789	26181059	-	26163789;26180615	26180565;26181059	ES	0.33	50	50	ENSMUST00000102956.8	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26180615	26181197	-	26180615;26181109	26181059;26181197	ES	0.2	50	50	ENSMUST00000102956.8	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26163789;26174755	26174693;26180565	-	26163789	26180565	cassetteExon	0.5	100	100	ENSMUST00000102956.8	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26163789;26174755	26174693;26181059	-	26163789;26180615	26180565;26181059	MXE	0.5	100	100	ENSMUST00000102956.8	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26163789;26174755	26174693;26181197	-	26163789;26181109	26180565;26181197	MXE	0.5	100	100	ENSMUST00000102956.8	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26163789	26163952	-	26163789	26180565	A5SS	0.2	50	50	ENSMUST00000102956.8	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26163789	26181197	-	26163789;26174755	26174693;26181197	ES	0.2	50	50	ENSMUST00000112331.9	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26163789;26180615	26180565;26181197	-	26163789;26174755	26174693;26181197	MXE	0.5	100	100	ENSMUST00000112331.9	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26174755;26180615	26180565;26181197	-	26174755	26181197	cassetteExon	0.5	100	100	ENSMUST00000112331.9	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26163789;26181109	26181059;26181197	-	26163789;26174755	26174693;26181197	MXE	0.5	100	100	ENSMUST00000112331.9	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26174755;26181109	26181059;26181197	-	26174755	26181197	cassetteExon	0.5	100	100	ENSMUST00000112331.9	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26163789	26163952	-	26163789	26174693	A5SS	0.2	50	50	ENSMUST00000112331.9	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26163789	26181197	-	26163789;26181109	26181059;26181197	ES	0.2	50	50	ENSMUST00000145738.8	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26163789;26174755	26174693;26181059	-	26163789	26181059	cassetteExon	0.5	100	100	ENSMUST00000145738.8	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26163789;26180615	26180565;26181197	-	26163789;26181109	26181059;26181197	MXE	0.5	100	100	ENSMUST00000145738.8	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26163789	26163952	-	26163789	26181059	A5SS	0.2	50	50	ENSMUST00000145738.8	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26174755;26180615	26180565;26181059	-	26174755	26181059	cassetteExon	0.5	100	100	ENSMUST00000090359.11	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26163789;26180615	26180565;26181197	-	26163789;26181109	26174693;26181197	MXE	0.5	100	100	ENSMUST00000090359.11	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26174755;26180615	26180565;26181197	-	26174755;26181109	26181059;26181197	MXE	0.5	100	100	ENSMUST00000090359.11	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26160183	26181197	-	26160183;26163789	26163730;26181197	ES	0.2	50	50	ENSMUST00000112330.8	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26163789;26180615	26180565;26181197	-	26163789	26181197	cassetteExon	0.5	100	100	ENSMUST00000112330.8	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26163789	26163952	-	26163789	26181197	A5SS	0.2	50	50	ENSMUST00000112330.8	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26174755	26181197	-	26160183	26181197	A3SS	0.2	50	50	ENSMUST00000142679.8	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26180615	26181197	-	26160183	26181197	A3SS	0.2	50	50	ENSMUST00000142679.8	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26181109	26181197	-	26160183	26181197	A3SS	0.2	50	50	ENSMUST00000142679.8	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26160183	26181197	-	26160183	26163730	5pMXE	0.5	50	50	ENSMUST00000127078.8	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26149471	26159834	-	26149471	26150943	5pMXE	0.5	50	50	ENSMUST00000136625.2	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26163789;26181109	26181059;26181197	-	26163789;26180615	26174693;26181197	MXE	0.5	100	100	ENSMUST00000146438.2	ENSMUSG00000021870.18	Slmap	chr14	protein_coding	sarcolemma associated protein
chr14	26329786	26332666	+	26329786	26333122	A3SS	0.5	50	50	ENSMUST00000224248.2	ENSMUSG00000040818.11	Dennd6a	chr14	protein_coding	DENN/MADD domain containing 6A
chr14	26338113	26349848	+	26338113	26340470	A3SS&ES	0.5	50	50	ENSMUST00000224248.2	ENSMUSG00000040818.11	Dennd6a	chr14	protein_coding	DENN/MADD domain containing 6A
chr14	26313592	26320771	+	26295253	26320771	A5SS	0.5	50	50	ENSMUST00000224248.2	ENSMUSG00000040818.11	Dennd6a	chr14	protein_coding	DENN/MADD domain containing 6A
chr14	26295386	26313388	+	26295337	26313388	A5SS	0.33	50	50	ENSMUST00000224378.2	ENSMUSG00000040818.11	Dennd6a	chr14	protein_coding	DENN/MADD domain containing 6A
chr14	26301017	26313388	+	26295337	26313388	A5SS	0.33	50	50	ENSMUST00000224378.2	ENSMUSG00000040818.11	Dennd6a	chr14	protein_coding	DENN/MADD domain containing 6A
chr14	26301017	26313388	+	26295386	26313388	A5SS	0.33	50	50	ENSMUST00000224111.2	ENSMUSG00000040818.11	Dennd6a	chr14	protein_coding	DENN/MADD domain containing 6A
chr14	26359641	26368069	+	26359641;26367894	26367814;26368069	ES	0.5	50	50	ENSMUST00000022429.9	ENSMUSG00000021877.13	Arf4	chr14	protein_coding	ADP-ribosylation factor 4
chr14	26375117	26385391	+	26375117	26377051	3pMXE	0.5	50	50	ENSMUST00000022429.9	ENSMUSG00000021877.13	Arf4	chr14	protein_coding	ADP-ribosylation factor 4
chr14	26367894	26368043	+	26367894	26368069	A3SS	0.5	50	50	ENSMUST00000022429.9	ENSMUSG00000021877.13	Arf4	chr14	protein_coding	ADP-ribosylation factor 4
chr14	26359641	26368069	+	26359641	26367814	A3SS&ES	0.33	50	50	ENSMUST00000166075.8	ENSMUSG00000021877.13	Arf4	chr14	protein_coding	ADP-ribosylation factor 4
chr14	26359641;26368178	26367814;26374261	+	26359641	26374261	cassetteExon	0.5	100	100	ENSMUST00000171282.2	ENSMUSG00000021877.13	Arf4	chr14	protein_coding	ADP-ribosylation factor 4
chr14	26359641;26368178	26368069;26374261	+	26359641	26374261	cassetteExon	0.5	100	100	ENSMUST00000171282.2	ENSMUSG00000021877.13	Arf4	chr14	protein_coding	ADP-ribosylation factor 4
chr14	26616629	26619562	+	26616629	26619565	A3SS	0.5	50	50	ENSMUST00000238987.2	ENSMUSG00000021898.17	Asb14	chr14	protein_coding	ankyrin repeat and SOCS box-containing 14
chr14	26622434	26622804	+	26622435	26622804	A5SS	0.5	50	50	ENSMUST00000238987.2	ENSMUSG00000021898.17	Asb14	chr14	protein_coding	ankyrin repeat and SOCS box-containing 14
chr14	26625474	26633254	+	26625445	26633254	A5SS	0.5	50	50	ENSMUST00000238987.2	ENSMUSG00000021898.17	Asb14	chr14	protein_coding	ankyrin repeat and SOCS box-containing 14
chr14	26622935	26623024	+	26622803	26623024	A5SS	0.5	50	50	ENSMUST00000167365.3	ENSMUSG00000021898.17	Asb14	chr14	protein_coding	ankyrin repeat and SOCS box-containing 14
chr14	26682995	26685604	-	26682995;26684834	26684763;26685604	ES	0.5	50	50	ENSMUST00000036570.5	ENSMUSG00000040760.12	Appl1	chr14	protein_coding	adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
chr14	26682995	26685604	-	26684834	26685604	3pMXE	0.5	50	50	ENSMUST00000142261.2	ENSMUSG00000040760.12	Appl1	chr14	protein_coding	adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
chr14	26761364	26798308	+	26761186	26798308	A5SS	0.33	50	50	ENSMUST00000035336.5	ENSMUSG00000040717.7	Il17rd	chr14	protein_coding	interleukin 17 receptor D
chr14	26792940	26798308	+	26761186	26798308	A5SS	0.33	50	50	ENSMUST00000035336.5	ENSMUSG00000040717.7	Il17rd	chr14	protein_coding	interleukin 17 receptor D
chr14	26792940	26798308	+	26761364	26798308	A5SS	0.33	50	50	ENSMUST00000225146.2	ENSMUSG00000040717.7	Il17rd	chr14	protein_coding	interleukin 17 receptor D
chr14	26960110	26987480	+	26930912	26987480	A5SS	0.5	50	50	ENSMUST00000225949.2	ENSMUSG00000021895.11	Arhgef3	chr14	protein_coding	Rho guanine nucleotide exchange factor (GEF) 3
chr14	27058226	27084747	+	26987542	27084747	A5SS	0.33	50	50	ENSMUST00000225949.2	ENSMUSG00000021895.11	Arhgef3	chr14	protein_coding	Rho guanine nucleotide exchange factor (GEF) 3
chr14	27083752	27084747	+	26987542	27084747	A5SS	0.33	50	50	ENSMUST00000225949.2	ENSMUSG00000021895.11	Arhgef3	chr14	protein_coding	Rho guanine nucleotide exchange factor (GEF) 3
chr14	27083752	27084747	+	27058226	27084747	A5SS	0.33	50	50	ENSMUST00000224981.2	ENSMUSG00000021895.11	Arhgef3	chr14	protein_coding	Rho guanine nucleotide exchange factor (GEF) 3
chr14	27202048	27202873	+	27202048	27202599	A3SS	0.5	50	50	ENSMUST00000022450.6	ENSMUSG00000040651.10	Tasor	chr14	protein_coding	transcription activation suppressor
chr14	27204559;27205147	27204898;27205765	-	27204559	27205765	cassetteExon	0.5	100	100	ENSMUST00000223689.2	ENSMUSG00000046753.11	Ccdc66	chr14	protein_coding	coiled-coil domain containing 66
chr14	27227620	27228608	-	27220846	27228608	A3SS	0.5	50	50	ENSMUST00000050480.8	ENSMUSG00000046753.11	Ccdc66	chr14	protein_coding	coiled-coil domain containing 66
chr14	27220846	27222198	-	27220846	27228608	A5SS	0.5	50	50	ENSMUST00000050480.8	ENSMUSG00000046753.11	Ccdc66	chr14	protein_coding	coiled-coil domain containing 66
chr14	27375440	27498783	+	27375440;27498139	27498116;27498783	ES	0.5	50	50	ENSMUST00000210135.2	ENSMUSG00000040640.12	Erc2	chr14	protein_coding	ELKS/RAB6-interacting/CAST family member 2
chr14	27747130	27762300	+	27747130;27751426	27751391;27762300	ES	0.5	50	50	ENSMUST00000210135.2	ENSMUSG00000040640.12	Erc2	chr14	protein_coding	ELKS/RAB6-interacting/CAST family member 2
chr14	27762493	27802089	+	27762493;27768443	27768432;27802089	ES	0.5	50	50	ENSMUST00000210135.2	ENSMUSG00000040640.12	Erc2	chr14	protein_coding	ELKS/RAB6-interacting/CAST family member 2
chr14	28024967	28197560	+	28024967;28039271	28039206;28197560	ES	0.33	50	50	ENSMUST00000210135.2	ENSMUSG00000040640.12	Erc2	chr14	protein_coding	ELKS/RAB6-interacting/CAST family member 2
chr14	27344571;27345706	27345640;27374644	+	27344571	27374644	cassetteExon	0.5	100	100	ENSMUST00000210135.2	ENSMUSG00000040640.12	Erc2	chr14	protein_coding	ELKS/RAB6-interacting/CAST family member 2
chr14	27344571;27350422	27350369;27374644	+	27344571	27374644	cassetteExon	0.5	100	100	ENSMUST00000210135.2	ENSMUSG00000040640.12	Erc2	chr14	protein_coding	ELKS/RAB6-interacting/CAST family member 2
chr14	27375440	27375663	+	27375440	27498116	A3SS	0.33	50	50	ENSMUST00000210135.2	ENSMUSG00000040640.12	Erc2	chr14	protein_coding	ELKS/RAB6-interacting/CAST family member 2
chr14	27598618	27601431	+	27598618	27620523	A3SS	0.5	50	50	ENSMUST00000210135.2	ENSMUSG00000040640.12	Erc2	chr14	protein_coding	ELKS/RAB6-interacting/CAST family member 2
chr14	27446668	27498116	+	27375440	27498116	A5SS	0.5	50	50	ENSMUST00000210135.2	ENSMUSG00000040640.12	Erc2	chr14	protein_coding	ELKS/RAB6-interacting/CAST family member 2
chr14	27575306	27598544	+	27499199	27598544	A5SS	0.25	50	50	ENSMUST00000210135.2	ENSMUSG00000040640.12	Erc2	chr14	protein_coding	ELKS/RAB6-interacting/CAST family member 2
chr14	27595261	27598544	+	27499199	27598544	A5SS	0.25	50	50	ENSMUST00000210135.2	ENSMUSG00000040640.12	Erc2	chr14	protein_coding	ELKS/RAB6-interacting/CAST family member 2
chr14	27598159	27598544	+	27499199	27598544	A5SS	0.25	50	50	ENSMUST00000210135.2	ENSMUSG00000040640.12	Erc2	chr14	protein_coding	ELKS/RAB6-interacting/CAST family member 2
chr14	28177505	28197560	+	28039271	28197560	A5SS	0.33	50	50	ENSMUST00000210135.2	ENSMUSG00000040640.12	Erc2	chr14	protein_coding	ELKS/RAB6-interacting/CAST family member 2
chr14	27375440	27375663	+	27375440	27498783	A3SS	0.33	50	50	ENSMUST00000090302.6	ENSMUSG00000040640.12	Erc2	chr14	protein_coding	ELKS/RAB6-interacting/CAST family member 2
chr14	28177505	28197560	+	28024967	28197560	A5SS	0.33	50	50	ENSMUST00000090302.6	ENSMUSG00000040640.12	Erc2	chr14	protein_coding	ELKS/RAB6-interacting/CAST family member 2
chr14	27344571;27345706	27345640;27350369	+	27344571	27350369	cassetteExon	0.5	100	100	ENSMUST00000211087.2	ENSMUSG00000040640.12	Erc2	chr14	protein_coding	ELKS/RAB6-interacting/CAST family member 2
chr14	27344571;27345706	27345640;27374644	+	27344571;27350422	27350369;27374644	MXE	0.5	100	100	ENSMUST00000211087.2	ENSMUSG00000040640.12	Erc2	chr14	protein_coding	ELKS/RAB6-interacting/CAST family member 2
chr14	27345706;27350422	27350369;27374644	+	27345706	27374644	cassetteExon	0.5	100	100	ENSMUST00000209752.2	ENSMUSG00000040640.12	Erc2	chr14	protein_coding	ELKS/RAB6-interacting/CAST family member 2
chr14	27344571	27350369	+	27345706	27350369	5pMXE	0.5	50	50	ENSMUST00000210327.2	ENSMUSG00000040640.12	Erc2	chr14	protein_coding	ELKS/RAB6-interacting/CAST family member 2
chr14	28024967	28197560	+	28024967	28039206	3pMXE	0.5	50	50	ENSMUST00000211145.2	ENSMUSG00000040640.12	Erc2	chr14	protein_coding	ELKS/RAB6-interacting/CAST family member 2
chr14	27595261	27598544	+	27575306	27598544	A5SS	0.33	50	50	ENSMUST00000211636.2	ENSMUSG00000040640.12	Erc2	chr14	protein_coding	ELKS/RAB6-interacting/CAST family member 2
chr14	27598159	27598544	+	27575306	27598544	A5SS	0.33	50	50	ENSMUST00000211636.2	ENSMUSG00000040640.12	Erc2	chr14	protein_coding	ELKS/RAB6-interacting/CAST family member 2
chr14	27598159	27598544	+	27595261	27598544	A5SS	0.25	50	50	ENSMUST00000209476.2	ENSMUSG00000040640.12	Erc2	chr14	protein_coding	ELKS/RAB6-interacting/CAST family member 2
chr14	27762493	27802089	+	27768443	27802089	5pMXE	0.5	50	50	ENSMUST00000209800.2	ENSMUSG00000040640.12	Erc2	chr14	protein_coding	ELKS/RAB6-interacting/CAST family member 2
chr14	28228071	28230957	+	28228071	28233780	A3SS	0.5	50	50	ENSMUST00000063465.12	ENSMUSG00000021994.16	Wnt5a	chr14	protein_coding	wingless-type MMTV integration site family, member 5A
chr14	28232832	28233780	+	28228071	28233780	A5SS	0.25	50	50	ENSMUST00000063465.12	ENSMUSG00000021994.16	Wnt5a	chr14	protein_coding	wingless-type MMTV integration site family, member 5A
chr14	28233380	28233780	+	28228071	28233780	A5SS	0.25	50	50	ENSMUST00000063465.12	ENSMUSG00000021994.16	Wnt5a	chr14	protein_coding	wingless-type MMTV integration site family, member 5A
chr14	28233576	28233780	+	28228071	28233780	A5SS	0.25	50	50	ENSMUST00000063465.12	ENSMUSG00000021994.16	Wnt5a	chr14	protein_coding	wingless-type MMTV integration site family, member 5A
chr14	28233380	28233780	+	28232832	28233780	A5SS	0.25	50	50	ENSMUST00000151929.2	ENSMUSG00000021994.16	Wnt5a	chr14	protein_coding	wingless-type MMTV integration site family, member 5A
chr14	28233576	28233780	+	28232832	28233780	A5SS	0.25	50	50	ENSMUST00000151929.2	ENSMUSG00000021994.16	Wnt5a	chr14	protein_coding	wingless-type MMTV integration site family, member 5A
chr14	28233576	28233780	+	28233380	28233780	A5SS	0.25	50	50	ENSMUST00000112272.2	ENSMUSG00000021994.16	Wnt5a	chr14	protein_coding	wingless-type MMTV integration site family, member 5A
chr14	28385597	28419548	+	28385597	28391993	3pMXE	0.5	50	50	ENSMUST00000224853.2	ENSMUSG00000114818.2	Gm35164	chr14	lncRNA	predicted gene, 35164
chr14	28674254	28678749	-	28674254;28675890	28675838;28678749	ES	0.5	50	50	ENSMUST00000022567.9	ENSMUSG00000021991.10	Cacna2d3	chr14	protein_coding	calcium channel, voltage-dependent, alpha2/delta subunit 3
chr14	28905598;28939483	28939312;29015022	-	28905598	29015022	cassetteExon	0.5	100	100	ENSMUST00000022567.9	ENSMUSG00000021991.10	Cacna2d3	chr14	protein_coding	calcium channel, voltage-dependent, alpha2/delta subunit 3
chr14	29073900	29082665	-	29073900	29118378	A5SS	0.5	50	50	ENSMUST00000022567.9	ENSMUSG00000021991.10	Cacna2d3	chr14	protein_coding	calcium channel, voltage-dependent, alpha2/delta subunit 3
chr14	28744173	28749388	+	28744173	28749281	A3SS	0.5	50	50	ENSMUST00000055662.4	ENSMUSG00000045776.4	Lrtm1	chr14	protein_coding	leucine-rich repeats and transmembrane domains 1
chr14	28743446	28743577	+	28740566	28743577	A5SS	0.5	50	50	ENSMUST00000055662.4	ENSMUSG00000045776.4	Lrtm1	chr14	protein_coding	leucine-rich repeats and transmembrane domains 1
chr14	29298231	29314786	+	29298231	29298325	3pMXE	0.5	50	50	ENSMUST00000225295.2	ENSMUSG00000114704.2	Gm48003	chr14	lncRNA	predicted gene, 48003
chr14	29527165	29574277	-	29510051	29574277	A3SS	0.5	50	50	ENSMUST00000223916.2	ENSMUSG00000114774.2	Gm35281	chr14	lncRNA	predicted gene, 35281
chr14	29692073;29692819	29692757;29693745	+	29692073	29693745	cassetteExon	0.5	100	100	ENSMUST00000112268.4	ENSMUSG00000042682.11	Selenok	chr14	protein_coding	selenoprotein K
chr14	29711757	29711863	+	29711757	29712661	A3SS	0.5	50	50	ENSMUST00000016115.6	ENSMUSG00000015971.6	Actr8	chr14	protein_coding	ARP8 actin-related protein 8
chr14	29725003	29725518	-	29724371	29725518	A3SS	0.5	50	50	ENSMUST00000122205.9	ENSMUSG00000015966.18	Il17rb	chr14	protein_coding	interleukin 17 receptor B
chr14	29721300	29721434	-	29721300	29722292	A5SS	0.5	50	50	ENSMUST00000122205.9	ENSMUSG00000015966.18	Il17rb	chr14	protein_coding	interleukin 17 receptor B
chr14	29725644	29726229	-	29725644	29726233	A5SS	0.5	50	50	ENSMUST00000122205.9	ENSMUSG00000015966.18	Il17rb	chr14	protein_coding	interleukin 17 receptor B
chr14	29731190	29748728	+	29731190	29753042	A3SS	0.5	50	50	ENSMUST00000067620.12	ENSMUSG00000015970.20	Chdh	chr14	protein_coding	choline dehydrogenase
chr14	29744796	29753042	+	29731190	29753042	A5SS	0.5	50	50	ENSMUST00000067620.12	ENSMUSG00000015970.20	Chdh	chr14	protein_coding	choline dehydrogenase
chr14	29771077	29773327	-	29771077;29772217	29772191;29773327	ES	0.5	50	50	ENSMUST00000225717.2	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29801341	29817275	-	29801341	29804368	5pMXE	0.5	50	50	ENSMUST00000225717.2	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29783555	29787991	-	29774514	29787991	A3SS	0.5	50	50	ENSMUST00000225717.2	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29774514	29778191	-	29774514	29787991	A5SS	0.5	50	50	ENSMUST00000225717.2	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29804496	29817275	-	29804496;29811862	29811779;29817275	ES	0.2	50	50	ENSMUST00000112250.6	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29804496;29804953	29804909;29811779	-	29804496	29811779	cassetteExon	0.5	100	100	ENSMUST00000112250.6	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29804496;29811336	29811253;29817275	-	29804496;29811862	29811779;29817275	MXE	0.5	100	100	ENSMUST00000112250.6	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29827552;29829669	29829610;29833023	-	29827552;29829802	29829743;29833023	MXE	0.5	100	100	ENSMUST00000112250.6	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29850755;29851805	29851746;29852074	-	29850755	29852074	cassetteExon	0.5	100	100	ENSMUST00000112250.6	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29852161;29859081	29858998;29864505	-	29852161	29864505	cassetteExon	0.5	100	100	ENSMUST00000112250.6	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29864674;29894016	29893913;29900502	-	29864674;29893356	29893253;29900502	MXE	0.5	100	100	ENSMUST00000112250.6	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29804444	29817275	-	29811862	29817275	A3SS&ES	0.2	50	50	ENSMUST00000112250.6	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29864674	29885878	-	29864674	29893253	A5SS	0.25	50	50	ENSMUST00000112250.6	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29864674	29897154	-	29864674	29893253	A5SS&ES	0.25	50	50	ENSMUST00000112250.6	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	30072906	30074882	-	30072906	30212926	A5SS	0.5	50	50	ENSMUST00000112250.6	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29804496;29811336	29811253;29817275	-	29804496;29811862	29804909;29817275	MXE	0.5	100	100	ENSMUST00000112249.10	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29804953;29811336	29811253;29817275	-	29804953;29811862	29811779;29817275	MXE	0.5	100	100	ENSMUST00000112249.10	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29804496	29811253	-	29804496;29804953	29804909;29811253	ES	0.5	50	50	ENSMUST00000224395.2	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29804496;29811862	29811779;29817275	-	29804496;29811336	29804909;29817275	MXE	0.5	100	100	ENSMUST00000224395.2	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29804444	29817275	-	29811336	29817275	A3SS&ES	0.2	50	50	ENSMUST00000224395.2	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29850755	29852074	-	29851805	29852074	A3SS	0.5	50	50	ENSMUST00000224395.2	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29864674	29885878	-	29864674	29893913	A5SS	0.25	50	50	ENSMUST00000224395.2	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29864674	29897154	-	29864674	29893913	A5SS&ES	0.25	50	50	ENSMUST00000224395.2	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29771077	29773327	-	29771077	29772191	5pMXE	0.5	50	50	ENSMUST00000225353.2	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29804496	29817275	-	29804496;29811336	29811253;29817275	ES	0.2	50	50	ENSMUST00000238568.2	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29801341;29804444	29804368;29817275	-	29801341	29817275	cassetteExon	0.5	100	100	ENSMUST00000238571.2	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29801341;29804496	29804368;29817275	-	29801341	29817275	cassetteExon	0.5	100	100	ENSMUST00000238571.2	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29811336	29817275	-	29801341	29817275	A3SS	0.2	50	50	ENSMUST00000238571.2	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29811862	29817275	-	29801341	29817275	A3SS	0.2	50	50	ENSMUST00000238571.2	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29804496	29817275	-	29804444	29817275	A3SS	0.2	50	50	ENSMUST00000224912.2	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29804496	29804909	-	29804496	29817275	A5SS	0.25	50	50	ENSMUST00000238690.2	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	29864674	29885878	-	29864674	29897154	A5SS	0.25	50	50	ENSMUST00000224073.2	ENSMUSG00000015968.19	Cacna1d	chr14	protein_coding	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr14	30227641	30233844	+	30227641	30232149	3pMXE	0.25	50	50	ENSMUST00000224453.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30227641	30234941	+	30227641	30232149	3pMXE	0.25	50	50	ENSMUST00000224453.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30227641	30240876	+	30227641	30232149	3pMXE	0.25	50	50	ENSMUST00000224453.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30207138	30224783	+	30206543	30224783	A5SS	0.25	50	50	ENSMUST00000224453.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30209455	30224783	+	30206543	30224783	A5SS	0.25	50	50	ENSMUST00000224453.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30210577	30224783	+	30206543	30224783	A5SS	0.25	50	50	ENSMUST00000224453.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30227641	30240876	+	30227641;30235054	30234941;30240876	ES	0.25	50	50	ENSMUST00000225196.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30241634	30244685	+	30241634;30243612	30243547;30244685	ES	0.5	50	50	ENSMUST00000225196.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30227641;30233981	30233844;30234941	+	30227641	30234941	cassetteExon	0.5	100	100	ENSMUST00000225196.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30245768;30247256	30247165;30248144	+	30245768	30248144	cassetteExon	0.5	100	100	ENSMUST00000225196.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30235367	30240876	+	30235054	30240876	A5SS	0.25	50	50	ENSMUST00000225196.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30235507	30240876	+	30235054	30240876	A5SS	0.25	50	50	ENSMUST00000225196.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30227641;30235367	30234941;30240876	+	30227641	30240876	cassetteExon	0.5	100	100	ENSMUST00000223658.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30227641	30233844	+	30227641	30240876	A3SS	0.25	50	50	ENSMUST00000223658.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30235507	30240876	+	30227641	30240876	A5SS	0.25	50	50	ENSMUST00000223658.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30207138	30224783	+	30207138;30210577	30210470;30224783	ES	0.33	50	50	ENSMUST00000224810.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30207138;30209455	30209422;30210470	+	30207138	30210470	cassetteExon	0.5	100	100	ENSMUST00000224810.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30207138;30209455	30209422;30224783	+	30207138;30210577	30210470;30224783	MXE	0.5	100	100	ENSMUST00000224810.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30207269	30210470	+	30207138	30210470	A5SS	0.33	50	50	ENSMUST00000224810.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30207138;30209455	30209422;30224783	+	30207138	30224783	cassetteExon	0.5	100	100	ENSMUST00000225521.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30209455	30224783	+	30209455;30210577	30210470;30224783	ES	0.33	50	50	ENSMUST00000225923.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30207199	30209407	+	30207199	30209422	A3SS	0.5	50	50	ENSMUST00000225923.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30207138	30209422	+	30207199	30209422	A5SS	0.5	50	50	ENSMUST00000225923.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30207138	30210470	+	30209455	30210470	A5SS&ES	0.33	50	50	ENSMUST00000225923.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30207138	30224783	+	30210577	30224783	A5SS&ES	0.33	50	50	ENSMUST00000225923.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30207269	30210470	+	30209455	30210470	A5SS&ES	0.33	50	50	ENSMUST00000225923.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30209455	30224783	+	30210577	30224783	A5SS&ES	0.33	50	50	ENSMUST00000225124.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30207138	30224783	+	30209455	30224783	A5SS&ES	0.33	50	50	ENSMUST00000225806.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30235367	30240876	+	30235507	30240876	A5SS	0.25	50	50	ENSMUST00000223754.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30227641	30240876	+	30235367	30240876	5pMXE	0.25	50	50	ENSMUST00000225655.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30245768	30248144	+	30245768	30247165	3pMXE	0.5	50	50	ENSMUST00000225407.2	ENSMUSG00000021962.10	Dcp1a	chr14	protein_coding	decapping mRNA 1A
chr14	30271337;30279645	30279603;30280678	+	30271337	30280678	cassetteExon	0.5	100	100	ENSMUST00000022529.8	ENSMUSG00000021957.8	Tkt	chr14	protein_coding	transketolase
chr14	30271337;30279650	30279603;30280678	+	30271337	30280678	cassetteExon	0.5	100	100	ENSMUST00000022529.8	ENSMUSG00000021957.8	Tkt	chr14	protein_coding	transketolase
chr14	30279650	30280678	+	30279645	30280678	A5SS	0.33	50	50	ENSMUST00000162356.2	ENSMUSG00000021957.8	Tkt	chr14	protein_coding	transketolase
chr14	30271337	30280678	+	30279650	30280678	5pMXE	0.33	50	50	ENSMUST00000225857.2	ENSMUSG00000021957.8	Tkt	chr14	protein_coding	transketolase
chr14	30320585	30320675	-	30317982	30320675	A3SS	0.5	50	50	ENSMUST00000112210.11	ENSMUSG00000021948.18	Prkcd	chr14	protein_coding	protein kinase C, delta
chr14	30324371	30324616	-	30324371	30324694	A5SS	0.5	50	50	ENSMUST00000112210.11	ENSMUSG00000021948.18	Prkcd	chr14	protein_coding	protein kinase C, delta
chr14	30401332	30411662	+	30401332;30404813	30404708;30411662	ES	0.5	50	50	ENSMUST00000064230.16	ENSMUSG00000052395.18	Rft1	chr14	protein_coding	RFT1 homolog
chr14	30380351;30380832	30380689;30382154	+	30380351	30382154	cassetteExon	0.5	100	100	ENSMUST00000064230.16	ENSMUSG00000052395.18	Rft1	chr14	protein_coding	RFT1 homolog
chr14	30385136	30385231	+	30385136	30388636	A3SS	0.5	50	50	ENSMUST00000064230.16	ENSMUSG00000052395.18	Rft1	chr14	protein_coding	RFT1 homolog
chr14	30398864	30399644	+	30398857	30399644	A5SS	0.5	50	50	ENSMUST00000064230.16	ENSMUSG00000052395.18	Rft1	chr14	protein_coding	RFT1 homolog
chr14	30401332	30411662	+	30404813	30411662	5pMXE	0.5	50	50	ENSMUST00000226805.2	ENSMUSG00000052395.18	Rft1	chr14	protein_coding	RFT1 homolog
chr14	30537610	30539665	+	30537610;30538833	30538705;30539665	ES	0.5	50	50	ENSMUST00000112184.10	ENSMUSG00000006527.17	Sfmbt1	chr14	protein_coding	Scm-like with four mbt domains 1
chr14	30437832	30487920	+	30436923	30487920	A5SS	0.25	50	50	ENSMUST00000112184.10	ENSMUSG00000006527.17	Sfmbt1	chr14	protein_coding	Scm-like with four mbt domains 1
chr14	30438545	30487920	+	30436923	30487920	A5SS	0.25	50	50	ENSMUST00000112184.10	ENSMUSG00000006527.17	Sfmbt1	chr14	protein_coding	Scm-like with four mbt domains 1
chr14	30460587	30487920	+	30436923	30487920	A5SS	0.25	50	50	ENSMUST00000112184.10	ENSMUSG00000006527.17	Sfmbt1	chr14	protein_coding	Scm-like with four mbt domains 1
chr14	30437832	30487920	+	30460587	30487920	A5SS&ES	0.33	50	50	ENSMUST00000227201.2	ENSMUSG00000006527.17	Sfmbt1	chr14	protein_coding	Scm-like with four mbt domains 1
chr14	30438545	30487920	+	30460587	30487920	A5SS&ES	0.33	50	50	ENSMUST00000227201.2	ENSMUSG00000006527.17	Sfmbt1	chr14	protein_coding	Scm-like with four mbt domains 1
chr14	30438545	30487920	+	30437832	30487920	A5SS	0.25	50	50	ENSMUST00000054230.12	ENSMUSG00000006527.17	Sfmbt1	chr14	protein_coding	Scm-like with four mbt domains 1
chr14	30584885;30585224	30585145;30586386	+	30584885	30586386	cassetteExon	0.5	100	100	ENSMUST00000006701.8	ENSMUSG00000006526.14	Stimate	chr14	protein_coding	STIM activating enhancer
chr14	30588507	30588580	+	30586481	30588580	A5SS	0.5	50	50	ENSMUST00000006701.8	ENSMUSG00000006526.14	Stimate	chr14	protein_coding	STIM activating enhancer
chr14	30547847	30584837	+	30547847	30594507	A3SS	0.5	50	50	ENSMUST00000228066.2	ENSMUSG00000006526.14	Stimate	chr14	protein_coding	STIM activating enhancer
chr14	30593515	30594507	+	30547847	30594507	A5SS	0.5	50	50	ENSMUST00000228066.2	ENSMUSG00000006526.14	Stimate	chr14	protein_coding	STIM activating enhancer
chr14	30618727	30619814	+	30618727;30619530	30619480;30619814	ES	0.5	50	50	ENSMUST00000120269.11	ENSMUSG00000021922.18	Itih4	chr14	protein_coding	inter alpha-trypsin inhibitor, heavy chain 4
chr14	30619846	30621277	+	30619846;30620053	30619937;30621277	ES	0.5	50	50	ENSMUST00000120269.11	ENSMUSG00000021922.18	Itih4	chr14	protein_coding	inter alpha-trypsin inhibitor, heavy chain 4
chr14	30618727	30619483	+	30618727	30619480	A3SS	0.33	50	50	ENSMUST00000120269.11	ENSMUSG00000021922.18	Itih4	chr14	protein_coding	inter alpha-trypsin inhibitor, heavy chain 4
chr14	30618727	30619814	+	30618727;30619530	30619483;30619814	ES	0.5	50	50	ENSMUST00000078490.14	ENSMUSG00000021922.18	Itih4	chr14	protein_coding	inter alpha-trypsin inhibitor, heavy chain 4
chr14	30635150	30636610	-	30635150;30636008	30636006;30636610	ES	0.5	50	50	ENSMUST00000006697.17	ENSMUSG00000006522.18	Itih3	chr14	protein_coding	inter-alpha trypsin inhibitor, heavy chain 3
chr14	30634767	30635118	-	30634868	30635118	A3SS&ES	0.5	50	50	ENSMUST00000006697.17	ENSMUSG00000006522.18	Itih3	chr14	protein_coding	inter-alpha trypsin inhibitor, heavy chain 3
chr14	30635150	30636610	-	30635150	30636006	5pMXE	0.5	50	50	ENSMUST00000226179.2	ENSMUSG00000006522.18	Itih3	chr14	protein_coding	inter-alpha trypsin inhibitor, heavy chain 3
chr14	30664583	30664851	-	30664595	30664851	A3SS	0.5	50	50	ENSMUST00000006704.17	ENSMUSG00000006529.17	Itih1	chr14	protein_coding	inter-alpha trypsin inhibitor, heavy chain 1
chr14	30673675;30675608	30675429;30675760	+	30673675	30675760	cassetteExon	0.5	100	100	ENSMUST00000226551.2	ENSMUSG00000021918.11	Nek4	chr14	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 4
chr14	30692521;30696315	30696172;30697180	+	30692521	30697180	cassetteExon	0.5	100	100	ENSMUST00000226551.2	ENSMUSG00000021918.11	Nek4	chr14	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 4
chr14	30692521;30696315	30696265;30697180	+	30692521	30697180	cassetteExon	0.5	100	100	ENSMUST00000226551.2	ENSMUSG00000021918.11	Nek4	chr14	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 4
chr14	30673782	30675760	+	30673675	30675760	A5SS	0.33	50	50	ENSMUST00000226551.2	ENSMUSG00000021918.11	Nek4	chr14	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 4
chr14	30692521	30696265	+	30692521	30696172	A3SS	0.33	50	50	ENSMUST00000228328.2	ENSMUSG00000021918.11	Nek4	chr14	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 4
chr14	30673782	30675760	+	30675608	30675760	A5SS&ES	0.33	50	50	ENSMUST00000050171.10	ENSMUSG00000021918.11	Nek4	chr14	protein_coding	NIMA (never in mitosis gene a)-related expressed kinase 4
chr14	30722717	30722801	-	30722721	30722801	A3SS	0.5	50	50	ENSMUST00000226782.2	ENSMUSG00000021917.17	Spcs1	chr14	protein_coding	signal peptidase complex subunit 1 homolog (S. cerevisiae)
chr14	30728469	30730611	+	30728469;30728688	30728590;30730611	ES	0.5	50	50	ENSMUST00000168584.9	ENSMUSG00000021916.17	Glt8d1	chr14	protein_coding	glycosyltransferase 8 domain containing 1
chr14	30723385;30726747	30726652;30728416	+	30723385	30728416	cassetteExon	0.5	100	100	ENSMUST00000168584.9	ENSMUSG00000021916.17	Glt8d1	chr14	protein_coding	glycosyltransferase 8 domain containing 1
chr14	30732987	30733080	+	30732987	30733078	A3SS	0.5	50	50	ENSMUST00000168584.9	ENSMUSG00000021916.17	Glt8d1	chr14	protein_coding	glycosyltransferase 8 domain containing 1
chr14	30723954	30728416	+	30723385	30728416	A5SS	0.33	50	50	ENSMUST00000168584.9	ENSMUSG00000021916.17	Glt8d1	chr14	protein_coding	glycosyltransferase 8 domain containing 1
chr14	30730669	30731692	+	30730824	30731692	A5SS	0.5	50	50	ENSMUST00000168584.9	ENSMUSG00000021916.17	Glt8d1	chr14	protein_coding	glycosyltransferase 8 domain containing 1
chr14	30723954	30728416	+	30726747	30728416	A5SS&ES	0.33	50	50	ENSMUST00000226378.2	ENSMUSG00000021916.17	Glt8d1	chr14	protein_coding	glycosyltransferase 8 domain containing 1
chr14	30723954;30726747	30726675;30728416	+	30723954	30728416	cassetteExon	0.5	100	100	ENSMUST00000022476.9	ENSMUSG00000021916.17	Glt8d1	chr14	protein_coding	glycosyltransferase 8 domain containing 1
chr14	30728469	30730611	+	30728688	30730611	5pMXE	0.5	50	50	ENSMUST00000228914.2	ENSMUSG00000021916.17	Glt8d1	chr14	protein_coding	glycosyltransferase 8 domain containing 1
chr14	30739124	30739765	-	30739124;30739370	30739233;30739765	ES	0.5	50	50	ENSMUST00000226740.2	ENSMUSG00000042354.8	Gnl3	chr14	protein_coding	guanine nucleotide binding protein-like 3 (nucleolar)
chr14	30739370	30740886	-	30739370;30739823	30739765;30740886	ES	0.5	50	50	ENSMUST00000226740.2	ENSMUSG00000042354.8	Gnl3	chr14	protein_coding	guanine nucleotide binding protein-like 3 (nucleolar)
chr14	30735212	30735386	-	30735281	30735386	A3SS	0.5	50	50	ENSMUST00000226740.2	ENSMUSG00000042354.8	Gnl3	chr14	protein_coding	guanine nucleotide binding protein-like 3 (nucleolar)
chr14	30738411	30738770	-	30738349	30738770	A3SS	0.5	50	50	ENSMUST00000226740.2	ENSMUSG00000042354.8	Gnl3	chr14	protein_coding	guanine nucleotide binding protein-like 3 (nucleolar)
chr14	30738349	30738784	-	30738349	30738770	A5SS	0.5	50	50	ENSMUST00000226740.2	ENSMUSG00000042354.8	Gnl3	chr14	protein_coding	guanine nucleotide binding protein-like 3 (nucleolar)
chr14	30738349	30738784	-	30738411	30738784	A3SS	0.5	50	50	ENSMUST00000037739.8	ENSMUSG00000042354.8	Gnl3	chr14	protein_coding	guanine nucleotide binding protein-like 3 (nucleolar)
chr14	30738411	30738770	-	30738411	30738784	A5SS	0.5	50	50	ENSMUST00000037739.8	ENSMUSG00000042354.8	Gnl3	chr14	protein_coding	guanine nucleotide binding protein-like 3 (nucleolar)
chr14	30739124	30739765	-	30739124	30739233	A5SS	0.5	50	50	ENSMUST00000228774.2	ENSMUSG00000042354.8	Gnl3	chr14	protein_coding	guanine nucleotide binding protein-like 3 (nucleolar)
chr14	30739124;30739370	30739233;30740886	-	30739124;30739823	30739765;30740886	MXE	0.5	100	100	ENSMUST00000228341.2	ENSMUSG00000042354.8	Gnl3	chr14	protein_coding	guanine nucleotide binding protein-like 3 (nucleolar)
chr14	30739370	30740886	-	30739370	30739765	5pMXE	0.5	50	50	ENSMUST00000227467.2	ENSMUSG00000042354.8	Gnl3	chr14	protein_coding	guanine nucleotide binding protein-like 3 (nucleolar)
chr14	30766666	30768289	+	30766666;30767382	30767287;30768289	ES	0.5	50	50	ENSMUST00000112098.11	ENSMUSG00000042323.18	Pbrm1	chr14	protein_coding	polybromo 1
chr14	30776212	30783426	+	30776212;30778237	30778193;30783426	ES	0.5	50	50	ENSMUST00000112098.11	ENSMUSG00000042323.18	Pbrm1	chr14	protein_coding	polybromo 1
chr14	30829267	30835806	+	30829267;30832536	30832372;30835806	ES	0.5	50	50	ENSMUST00000112098.11	ENSMUSG00000042323.18	Pbrm1	chr14	protein_coding	polybromo 1
chr14	30832536	30838970	+	30832536;30835961	30835806;30838970	ES	0.33	50	50	ENSMUST00000112098.11	ENSMUSG00000042323.18	Pbrm1	chr14	protein_coding	polybromo 1
chr14	30741250;30745127	30745024;30747455	+	30741250;30744816	30744677;30747455	MXE	0.5	100	100	ENSMUST00000112098.11	ENSMUSG00000042323.18	Pbrm1	chr14	protein_coding	polybromo 1
chr14	30741250;30745136	30745024;30747455	+	30741250;30744816	30744677;30747455	MXE	0.5	100	100	ENSMUST00000112098.11	ENSMUSG00000042323.18	Pbrm1	chr14	protein_coding	polybromo 1
chr14	30744816;30745127	30745024;30747455	+	30744816	30747455	cassetteExon	0.5	100	100	ENSMUST00000112098.11	ENSMUSG00000042323.18	Pbrm1	chr14	protein_coding	polybromo 1
chr14	30744816;30745136	30745024;30747455	+	30744816	30747455	cassetteExon	0.5	100	100	ENSMUST00000112098.11	ENSMUSG00000042323.18	Pbrm1	chr14	protein_coding	polybromo 1
chr14	30741250	30747458	+	30741250	30744677	A3SS&ES	0.33	50	50	ENSMUST00000112098.11	ENSMUSG00000042323.18	Pbrm1	chr14	protein_coding	polybromo 1
chr14	30752948	30753784	+	30752948	30754366	A3SS	0.5	50	50	ENSMUST00000112098.11	ENSMUSG00000042323.18	Pbrm1	chr14	protein_coding	polybromo 1
chr14	30789921	30796733	+	30789921	30796728	A3SS	0.33	50	50	ENSMUST00000112098.11	ENSMUSG00000042323.18	Pbrm1	chr14	protein_coding	polybromo 1
chr14	30789921	30804510	+	30789921	30796728	A3SS&ES	0.33	50	50	ENSMUST00000112098.11	ENSMUSG00000042323.18	Pbrm1	chr14	protein_coding	polybromo 1
chr14	30796939	30804510	+	30796939	30804507	A3SS	0.5	50	50	ENSMUST00000112098.11	ENSMUSG00000042323.18	Pbrm1	chr14	protein_coding	polybromo 1
chr14	30804692	30806106	+	30804692	30806031	A3SS	0.5	50	50	ENSMUST00000112098.11	ENSMUSG00000042323.18	Pbrm1	chr14	protein_coding	polybromo 1
chr14	30828224	30829066	+	30828305	30829066	A5SS	0.5	50	50	ENSMUST00000112098.11	ENSMUSG00000042323.18	Pbrm1	chr14	protein_coding	polybromo 1
chr14	30829267	30838970	+	30829267;30835961	30835806;30838970	ES	0.33	50	50	ENSMUST00000112095.8	ENSMUSG00000042323.18	Pbrm1	chr14	protein_coding	polybromo 1
chr14	30829267;30832536	30832372;30838970	+	30829267;30835961	30835806;30838970	MXE	0.5	100	100	ENSMUST00000112095.8	ENSMUSG00000042323.18	Pbrm1	chr14	protein_coding	polybromo 1
chr14	30741250;30744816	30744677;30745024	+	30741250	30745024	cassetteExon	0.5	100	100	ENSMUST00000112106.8	ENSMUSG00000042323.18	Pbrm1	chr14	protein_coding	polybromo 1
chr14	30741250	30747458	+	30741250	30745024	A3SS&ES	0.33	50	50	ENSMUST00000112106.8	ENSMUSG00000042323.18	Pbrm1	chr14	protein_coding	polybromo 1
chr14	30745136	30747455	+	30745127	30747455	A5SS	0.33	50	50	ENSMUST00000112106.8	ENSMUSG00000042323.18	Pbrm1	chr14	protein_coding	polybromo 1
chr14	30789921	30804510	+	30789921;30796939	30796728;30804510	ES	0.5	50	50	ENSMUST00000156628.8	ENSMUSG00000042323.18	Pbrm1	chr14	protein_coding	polybromo 1
chr14	30829267	30838970	+	30829267	30835806	3pMXE	0.33	50	50	ENSMUST00000156628.8	ENSMUSG00000042323.18	Pbrm1	chr14	protein_coding	polybromo 1
chr14	30789921	30804510	+	30789921	30796733	A3SS&ES	0.33	50	50	ENSMUST00000136237.8	ENSMUSG00000042323.18	Pbrm1	chr14	protein_coding	polybromo 1
chr14	30829267;30832536	30832372;30838970	+	30829267	30838970	cassetteExon	0.5	100	100	ENSMUST00000022474.14	ENSMUSG00000042323.18	Pbrm1	chr14	protein_coding	polybromo 1
chr14	30789921;30796939	30796733;30804510	+	30789921	30804510	cassetteExon	0.5	100	100	ENSMUST00000123678.8	ENSMUSG00000042323.18	Pbrm1	chr14	protein_coding	polybromo 1
chr14	30846566	30850590	-	30810983	30850590	A3SS	0.33	50	50	ENSMUST00000203261.3	ENSMUSG00000058351.12	Smim4	chr14	protein_coding	small integral membrane protein 4
chr14	30846790	30850590	-	30810983	30850590	A3SS	0.33	50	50	ENSMUST00000203261.3	ENSMUSG00000058351.12	Smim4	chr14	protein_coding	small integral membrane protein 4
chr14	30810983	30845679	-	30810983	30850590	A5SS	0.5	50	50	ENSMUST00000203261.3	ENSMUSG00000058351.12	Smim4	chr14	protein_coding	small integral membrane protein 4
chr14	30846790	30850590	-	30846566	30850590	A3SS	0.33	50	50	ENSMUST00000064032.10	ENSMUSG00000058351.12	Smim4	chr14	protein_coding	small integral membrane protein 4
chr14	30856880	30857295	+	30856880;30857061	30856987;30857295	ES	0.5	50	50	ENSMUST00000227096.2	ENSMUSG00000071547.5	Nt5dc2	chr14	protein_coding	5'-nucleotidase domain containing 2
chr14	30856407	30856696	+	30853333	30856696	A5SS	0.5	50	50	ENSMUST00000227096.2	ENSMUSG00000071547.5	Nt5dc2	chr14	protein_coding	5'-nucleotidase domain containing 2
chr14	30861370;30861610	30861464;30861701	-	30861370	30861701	cassetteExon	0.5	100	100	ENSMUST00000160024.8	ENSMUSG00000042286.14	Stab1	chr14	protein_coding	stabilin 1
chr14	30861281	30862105	-	30862032	30862105	A3SS&ES	0.5	50	50	ENSMUST00000036618.14	ENSMUSG00000042286.14	Stab1	chr14	protein_coding	stabilin 1
chr14	30864968	30865075	-	30864971	30865075	A3SS	0.5	50	50	ENSMUST00000036618.14	ENSMUSG00000042286.14	Stab1	chr14	protein_coding	stabilin 1
chr14	30861370	30861701	-	30861370	30861464	A5SS	0.5	50	50	ENSMUST00000160720.2	ENSMUSG00000042286.14	Stab1	chr14	protein_coding	stabilin 1
chr14	30913048	30914538	-	30913048	30913342	5pMXE	0.5	50	50	ENSMUST00000168206.8	ENSMUSG00000021910.16	Nisch	chr14	protein_coding	nischarin
chr14	30902906;30904597	30904456;30906899	-	30902906	30906899	cassetteExon	0.5	100	100	ENSMUST00000168206.8	ENSMUSG00000021910.16	Nisch	chr14	protein_coding	nischarin
chr14	30896849	30898287	-	30896843	30898287	A3SS	0.5	50	50	ENSMUST00000168206.8	ENSMUSG00000021910.16	Nisch	chr14	protein_coding	nischarin
chr14	30898972	30911688	-	30910751	30911688	A3SS&ES	0.5	50	50	ENSMUST00000168206.8	ENSMUSG00000021910.16	Nisch	chr14	protein_coding	nischarin
chr14	30906354	30906899	-	30902906	30906899	A3SS	0.33	50	50	ENSMUST00000168206.8	ENSMUSG00000021910.16	Nisch	chr14	protein_coding	nischarin
chr14	30909098	30909607	-	30909201	30909607	A3SS	0.5	50	50	ENSMUST00000168206.8	ENSMUSG00000021910.16	Nisch	chr14	protein_coding	nischarin
chr14	30913048	30914538	-	30913048;30913505	30913342;30914538	ES	0.5	50	50	ENSMUST00000022469.13	ENSMUSG00000021910.16	Nisch	chr14	protein_coding	nischarin
chr14	30926482	30928850	-	30926482	30928524	5pMXE	0.5	50	50	ENSMUST00000022469.13	ENSMUSG00000021910.16	Nisch	chr14	protein_coding	nischarin
chr14	30909675	30912953	-	30911783	30912953	A3SS&ES	0.5	50	50	ENSMUST00000168451.8	ENSMUSG00000021910.16	Nisch	chr14	protein_coding	nischarin
chr14	30906354	30906899	-	30904597	30906899	A3SS	0.33	50	50	ENSMUST00000170436.8	ENSMUSG00000021910.16	Nisch	chr14	protein_coding	nischarin
chr14	30913048	30914538	-	30913505	30914538	A3SS&ES	0.5	50	50	ENSMUST00000164956.8	ENSMUSG00000021910.16	Nisch	chr14	protein_coding	nischarin
chr14	30902906	30906899	-	30902906	30904456	5pMXE	0.5	50	50	ENSMUST00000167223.2	ENSMUSG00000021910.16	Nisch	chr14	protein_coding	nischarin
chr14	30909675	30910596	-	30909675	30912953	A5SS	0.5	50	50	ENSMUST00000170343.8	ENSMUSG00000021910.16	Nisch	chr14	protein_coding	nischarin
chr14	30932635	30933263	+	30932635	30933237	A3SS	0.5	50	50	ENSMUST00000169169.8	ENSMUSG00000091898.9	Tnnc1	chr14	protein_coding	troponin C, cardiac/slow skeletal
chr14	30961694	30962816	-	30961694;30962390	30962231;30962816	ES	0.5	50	50	ENSMUST00000226565.2	ENSMUSG00000021902.8	Phf7	chr14	protein_coding	PHD finger protein 7
chr14	30960439;30961193	30961077;30961588	-	30960439	30961588	cassetteExon	0.5	100	100	ENSMUST00000226565.2	ENSMUSG00000021902.8	Phf7	chr14	protein_coding	PHD finger protein 7
chr14	30962966	30963683	-	30962940	30963683	A3SS	0.33	50	50	ENSMUST00000226565.2	ENSMUSG00000021902.8	Phf7	chr14	protein_coding	PHD finger protein 7
chr14	30961694	30963683	-	30961694;30962940	30962816;30963683	ES	0.33	50	50	ENSMUST00000228930.2	ENSMUSG00000021902.8	Phf7	chr14	protein_coding	PHD finger protein 7
chr14	30961694;30962966	30962816;30963683	-	30961694	30963683	cassetteExon	0.5	100	100	ENSMUST00000228437.2	ENSMUSG00000021902.8	Phf7	chr14	protein_coding	PHD finger protein 7
chr14	30961694	30962231	-	30961694	30963683	A5SS	0.33	50	50	ENSMUST00000228437.2	ENSMUSG00000021902.8	Phf7	chr14	protein_coding	PHD finger protein 7
chr14	30978748	30979583	+	30978748	30979246	A3SS	0.5	50	50	ENSMUST00000022458.11	ENSMUSG00000021901.11	Bap1	chr14	protein_coding	Brca1 associated protein 1
chr14	30975597	30975990	+	30975532	30975990	A5SS	0.5	50	50	ENSMUST00000022458.11	ENSMUSG00000021901.11	Bap1	chr14	protein_coding	Brca1 associated protein 1
chr14	30991258	31014608	+	30991258	31041886	A3SS	0.5	50	50	ENSMUST00000228755.2	ENSMUSG00000115311.2	Gm35823	chr14	lncRNA	predicted gene, 35823
chr14	31083202	31085436	+	31082202	31085436	A5SS	0.5	50	50	ENSMUST00000022451.14	ENSMUSG00000021893.15	Capn7	chr14	protein_coding	calpain 7
chr14	31109840	31129316	-	31109840	31133498	A5SS	0.5	50	50	ENSMUST00000140002.8	ENSMUSG00000021892.15	Sh3bp5	chr14	protein_coding	SH3-domain binding protein 5 (BTK-associated)
chr14	31133626	31139368	-	31133626	31156040	A5SS	0.5	50	50	ENSMUST00000140002.8	ENSMUSG00000021892.15	Sh3bp5	chr14	protein_coding	SH3-domain binding protein 5 (BTK-associated)
chr14	31209698	31215554	-	31209698;31214413	31214279;31215554	ES	0.5	50	50	ENSMUST00000227777.2	ENSMUSG00000021891.9	Mettl6	chr14	protein_coding	methyltransferase like 6
chr14	31201767	31204748	-	31197373	31204748	A3SS	0.33	50	50	ENSMUST00000227777.2	ENSMUSG00000021891.9	Mettl6	chr14	protein_coding	methyltransferase like 6
chr14	31201767	31209528	-	31204889	31209528	A3SS&ES	0.5	50	50	ENSMUST00000227777.2	ENSMUSG00000021891.9	Mettl6	chr14	protein_coding	methyltransferase like 6
chr14	31203410	31204748	-	31197373	31204748	A3SS	0.33	50	50	ENSMUST00000227777.2	ENSMUSG00000021891.9	Mettl6	chr14	protein_coding	methyltransferase like 6
chr14	31214413	31215194	-	31214413	31215554	A5SS	0.5	50	50	ENSMUST00000227777.2	ENSMUSG00000021891.9	Mettl6	chr14	protein_coding	methyltransferase like 6
chr14	31201767	31209528	-	31201767;31204889	31204748;31209528	ES	0.5	50	50	ENSMUST00000055303.5	ENSMUSG00000021891.9	Mettl6	chr14	protein_coding	methyltransferase like 6
chr14	31203410	31204748	-	31201767	31204748	A3SS	0.33	50	50	ENSMUST00000055303.5	ENSMUSG00000021891.9	Mettl6	chr14	protein_coding	methyltransferase like 6
chr14	31228435	31228528	+	31226477	31228528	A5SS	0.5	50	50	ENSMUST00000022446.7	ENSMUSG00000021890.7	Eaf1	chr14	protein_coding	ELL associated factor 1
chr14	31275809	31302403	-	31275809	31299100	5pMXE	0.25	50	50	ENSMUST00000112027.9	ENSMUSG00000057606.15	Colq	chr14	protein_coding	collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
chr14	31275809	31332059	-	31275809	31299100	5pMXE	0.25	50	50	ENSMUST00000112027.9	ENSMUSG00000057606.15	Colq	chr14	protein_coding	collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
chr14	31275809	31279749	-	31275809	31299100	A5SS	0.25	50	50	ENSMUST00000112027.9	ENSMUSG00000057606.15	Colq	chr14	protein_coding	collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
chr14	31275809	31302403	-	31275809	31279749	5pMXE	0.25	50	50	ENSMUST00000150054.2	ENSMUSG00000057606.15	Colq	chr14	protein_coding	collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
chr14	31275809	31332059	-	31275809	31279749	5pMXE	0.25	50	50	ENSMUST00000150054.2	ENSMUSG00000057606.15	Colq	chr14	protein_coding	collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
chr14	31300574	31302403	-	31275809	31302403	A3SS	0.5	50	50	ENSMUST00000124014.8	ENSMUSG00000057606.15	Colq	chr14	protein_coding	collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
chr14	31308878	31313217	-	31302551	31313217	A3SS	0.5	50	50	ENSMUST00000124014.8	ENSMUSG00000057606.15	Colq	chr14	protein_coding	collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
chr14	31338471	31341802	-	31338471;31341030	31340929;31341802	ES	0.5	50	50	ENSMUST00000167175.8	ENSMUSG00000115022.2	Gm49387	chr14	protein_coding	predicted gene, 49387
chr14	31341885	31344796	-	31341885;31343065	31342960;31344796	ES	0.5	50	50	ENSMUST00000167175.8	ENSMUSG00000115022.2	Gm49387	chr14	protein_coding	predicted gene, 49387
chr14	31348409	31356156	-	31348409;31354925	31354853;31356156	ES	0.33	50	50	ENSMUST00000167175.8	ENSMUSG00000115022.2	Gm49387	chr14	protein_coding	predicted gene, 49387
chr14	31354925	31357701	-	31354925;31356236	31356156;31357701	ES	0.5	50	50	ENSMUST00000167175.8	ENSMUSG00000115022.2	Gm49387	chr14	protein_coding	predicted gene, 49387
chr14	31362555	31363123	-	31362555	31362746	5pMXE	0.5	50	50	ENSMUST00000167175.8	ENSMUSG00000115022.2	Gm49387	chr14	protein_coding	predicted gene, 49387
chr14	31348409;31352084	31351990;31354853	-	31348409	31354853	cassetteExon	0.5	100	100	ENSMUST00000167175.8	ENSMUSG00000115022.2	Gm49387	chr14	protein_coding	predicted gene, 49387
chr14	31330000	31332059	-	31275809	31332059	A3SS	0.5	50	50	ENSMUST00000167175.8	ENSMUSG00000115022.2	Gm49387	chr14	protein_coding	predicted gene, 49387
chr14	31352995	31354853	-	31348409	31354853	A3SS	0.33	50	50	ENSMUST00000167175.8	ENSMUSG00000115022.2	Gm49387	chr14	protein_coding	predicted gene, 49387
chr14	31352995	31356156	-	31354925	31356156	A3SS&ES	0.33	50	50	ENSMUST00000167175.8	ENSMUSG00000115022.2	Gm49387	chr14	protein_coding	predicted gene, 49387
chr14	31275809	31302403	-	31275809	31332059	A5SS	0.25	50	50	ENSMUST00000167175.8	ENSMUSG00000115022.2	Gm49387	chr14	protein_coding	predicted gene, 49387
chr14	31352084	31354853	-	31352084;31352995	31352918;31354853	ES	0.33	50	50	ENSMUST00000156431.8	ENSMUSG00000021884.19	Hacl1	chr14	protein_coding	2-hydroxyacyl-CoA lyase 1
chr14	31352995	31356156	-	31352995;31354925	31354853;31356156	ES	0.33	50	50	ENSMUST00000156431.8	ENSMUSG00000021884.19	Hacl1	chr14	protein_coding	2-hydroxyacyl-CoA lyase 1
chr14	31329752	31329924	-	31322279	31329924	A3SS	0.5	50	50	ENSMUST00000156431.8	ENSMUSG00000021884.19	Hacl1	chr14	protein_coding	2-hydroxyacyl-CoA lyase 1
chr14	31352084;31352995	31352918;31356156	-	31352084;31354925	31354853;31356156	MXE	0.5	100	100	ENSMUST00000167066.8	ENSMUSG00000021884.19	Hacl1	chr14	protein_coding	2-hydroxyacyl-CoA lyase 1
chr14	31348409;31354925	31354853;31357701	-	31348409;31356236	31356156;31357701	MXE	0.5	100	100	ENSMUST00000165955.8	ENSMUSG00000021884.19	Hacl1	chr14	protein_coding	2-hydroxyacyl-CoA lyase 1
chr14	31348409;31354925	31354853;31362451	-	31348409;31357741	31356156;31362451	MXE	0.5	100	100	ENSMUST00000165955.8	ENSMUSG00000021884.19	Hacl1	chr14	protein_coding	2-hydroxyacyl-CoA lyase 1
chr14	31352995	31356156	-	31348409	31356156	A3SS	0.33	50	50	ENSMUST00000165955.8	ENSMUSG00000021884.19	Hacl1	chr14	protein_coding	2-hydroxyacyl-CoA lyase 1
chr14	31348409	31351990	-	31348409	31356156	A5SS	0.33	50	50	ENSMUST00000165955.8	ENSMUSG00000021884.19	Hacl1	chr14	protein_coding	2-hydroxyacyl-CoA lyase 1
chr14	31348409;31354925	31354853;31356156	-	31348409;31352995	31351990;31356156	MXE	0.5	100	100	ENSMUST00000171414.8	ENSMUSG00000021884.19	Hacl1	chr14	protein_coding	2-hydroxyacyl-CoA lyase 1
chr14	31348409;31354925	31354853;31357701	-	31348409;31356236	31351990;31357701	MXE	0.5	100	100	ENSMUST00000171414.8	ENSMUSG00000021884.19	Hacl1	chr14	protein_coding	2-hydroxyacyl-CoA lyase 1
chr14	31352084;31354925	31354853;31357701	-	31352084;31356236	31352918;31357701	MXE	0.5	100	100	ENSMUST00000171414.8	ENSMUSG00000021884.19	Hacl1	chr14	protein_coding	2-hydroxyacyl-CoA lyase 1
chr14	31352995;31354925	31354853;31357701	-	31352995;31356236	31356156;31357701	MXE	0.5	100	100	ENSMUST00000171414.8	ENSMUSG00000021884.19	Hacl1	chr14	protein_coding	2-hydroxyacyl-CoA lyase 1
chr14	31348409;31354925	31354853;31362451	-	31348409;31357741	31351990;31362451	MXE	0.5	100	100	ENSMUST00000171414.8	ENSMUSG00000021884.19	Hacl1	chr14	protein_coding	2-hydroxyacyl-CoA lyase 1
chr14	31352084;31354925	31354853;31362451	-	31352084;31357741	31352918;31362451	MXE	0.5	100	100	ENSMUST00000171414.8	ENSMUSG00000021884.19	Hacl1	chr14	protein_coding	2-hydroxyacyl-CoA lyase 1
chr14	31352995;31354925	31354853;31362451	-	31352995;31357741	31356156;31362451	MXE	0.5	100	100	ENSMUST00000171414.8	ENSMUSG00000021884.19	Hacl1	chr14	protein_coding	2-hydroxyacyl-CoA lyase 1
chr14	31354925	31362451	-	31354925;31357741	31357701;31362451	ES	0.5	50	50	ENSMUST00000127204.9	ENSMUSG00000021884.19	Hacl1	chr14	protein_coding	2-hydroxyacyl-CoA lyase 1
chr14	31348409;31356236	31356156;31357701	-	31348409;31354925	31351990;31357701	MXE	0.5	100	100	ENSMUST00000127204.9	ENSMUSG00000021884.19	Hacl1	chr14	protein_coding	2-hydroxyacyl-CoA lyase 1
chr14	31352995	31356156	-	31352995	31354853	A5SS&ES	0.5	50	50	ENSMUST00000134626.8	ENSMUSG00000021884.19	Hacl1	chr14	protein_coding	2-hydroxyacyl-CoA lyase 1
chr14	31354925	31356156	-	31354925	31362451	A5SS	0.33	50	50	ENSMUST00000134626.8	ENSMUSG00000021884.19	Hacl1	chr14	protein_coding	2-hydroxyacyl-CoA lyase 1
chr14	31352084	31354853	-	31352995	31354853	3pMXE	0.33	50	50	ENSMUST00000155210.8	ENSMUSG00000021884.19	Hacl1	chr14	protein_coding	2-hydroxyacyl-CoA lyase 1
chr14	31354925	31362451	-	31357741	31362451	3pMXE	0.5	50	50	ENSMUST00000156189.8	ENSMUSG00000021884.19	Hacl1	chr14	protein_coding	2-hydroxyacyl-CoA lyase 1
chr14	31363092;31384282	31384027;31387839	+	31363092	31387839	cassetteExon	0.5	100	100	ENSMUST00000128014.2	ENSMUSG00000021900.11	Btd	chr14	protein_coding	biotinidase
chr14	31500962	31503660	-	31500962	31502122	5pMXE	0.33	50	50	ENSMUST00000227863.2	ENSMUSG00000014496.9	Ankrd28	chr14	protein_coding	ankyrin repeat domain 28
chr14	31500962	31552284	-	31500962	31502122	5pMXE	0.33	50	50	ENSMUST00000227863.2	ENSMUSG00000014496.9	Ankrd28	chr14	protein_coding	ankyrin repeat domain 28
chr14	31457043	31458710	-	31457043	31458717	A5SS	0.5	50	50	ENSMUST00000227863.2	ENSMUSG00000014496.9	Ankrd28	chr14	protein_coding	ankyrin repeat domain 28
chr14	31458795	31464723	-	31458795	31465180	A5SS	0.5	50	50	ENSMUST00000227863.2	ENSMUSG00000014496.9	Ankrd28	chr14	protein_coding	ankyrin repeat domain 28
chr14	31486289	31552284	-	31486289;31500962	31500879;31552284	ES	0.5	50	50	ENSMUST00000014640.9	ENSMUSG00000014496.9	Ankrd28	chr14	protein_coding	ankyrin repeat domain 28
chr14	31500962	31503660	-	31500962	31552284	A5SS	0.33	50	50	ENSMUST00000014640.9	ENSMUSG00000014496.9	Ankrd28	chr14	protein_coding	ankyrin repeat domain 28
chr14	31751988	31762313	+	31751988	31768254	A3SS	0.5	50	50	ENSMUST00000164208.2	ENSMUSG00000021903.12	Galnt15	chr14	protein_coding	polypeptide N-acetylgalactosaminyltransferase 15
chr14	31765250	31768254	+	31751988	31768254	A5SS	0.5	50	50	ENSMUST00000164208.2	ENSMUSG00000021903.12	Galnt15	chr14	protein_coding	polypeptide N-acetylgalactosaminyltransferase 15
chr14	31805203	31807367	-	31805203;31806938	31806864;31807367	ES	0.33	50	50	ENSMUST00000022461.11	ENSMUSG00000021905.15	Dph3	chr14	protein_coding	diphthamine biosynthesis 3
chr14	31807064	31807367	-	31806938	31807367	A3SS	0.33	50	50	ENSMUST00000022461.11	ENSMUSG00000021905.15	Dph3	chr14	protein_coding	diphthamine biosynthesis 3
chr14	31806938	31807509	-	31806938	31807367	A5SS	0.5	50	50	ENSMUST00000022461.11	ENSMUSG00000021905.15	Dph3	chr14	protein_coding	diphthamine biosynthesis 3
chr14	31805203	31807367	-	31805203;31807064	31806864;31807367	ES	0.33	50	50	ENSMUST00000112001.9	ENSMUSG00000021905.15	Dph3	chr14	protein_coding	diphthamine biosynthesis 3
chr14	31805203	31807367	-	31805203	31806864	A5SS&ES	0.5	50	50	ENSMUST00000167796.2	ENSMUSG00000021905.15	Dph3	chr14	protein_coding	diphthamine biosynthesis 3
chr14	31805203	31807367	-	31806938	31807367	3pMXE	0.33	50	50	ENSMUST00000112000.2	ENSMUSG00000021905.15	Dph3	chr14	protein_coding	diphthamine biosynthesis 3
chr14	31807523;31808010	31807806;31813593	+	31807523	31813593	cassetteExon	0.5	100	100	ENSMUST00000166810.2	ENSMUSG00000021906.15	Oxnad1	chr14	protein_coding	oxidoreductase NAD-binding domain containing 1
chr14	31814088	31818444	+	31814088;31817428	31817322;31818444	ES	0.33	50	50	ENSMUST00000171598.8	ENSMUSG00000021906.15	Oxnad1	chr14	protein_coding	oxidoreductase NAD-binding domain containing 1
chr14	31814088;31814618	31814433;31817322	+	31814088	31817322	cassetteExon	0.5	100	100	ENSMUST00000171598.8	ENSMUSG00000021906.15	Oxnad1	chr14	protein_coding	oxidoreductase NAD-binding domain containing 1
chr14	31808010	31813578	+	31808010	31813593	A3SS	0.5	50	50	ENSMUST00000171598.8	ENSMUSG00000021906.15	Oxnad1	chr14	protein_coding	oxidoreductase NAD-binding domain containing 1
chr14	31818585	31821406	+	31818585	31821346	A3SS	0.25	50	50	ENSMUST00000022462.14	ENSMUSG00000021906.15	Oxnad1	chr14	protein_coding	oxidoreductase NAD-binding domain containing 1
chr14	31818585	31821491	+	31818585	31821346	A3SS	0.25	50	50	ENSMUST00000022462.14	ENSMUSG00000021906.15	Oxnad1	chr14	protein_coding	oxidoreductase NAD-binding domain containing 1
chr14	31818585	31824618	+	31818585	31821346	A3SS&ES	0.25	50	50	ENSMUST00000022462.14	ENSMUSG00000021906.15	Oxnad1	chr14	protein_coding	oxidoreductase NAD-binding domain containing 1
chr14	31821588	31822912	+	31821588	31822943	A3SS	0.5	50	50	ENSMUST00000022462.14	ENSMUSG00000021906.15	Oxnad1	chr14	protein_coding	oxidoreductase NAD-binding domain containing 1
chr14	31807523	31813593	+	31808010	31813593	A5SS	0.5	50	50	ENSMUST00000022462.14	ENSMUSG00000021906.15	Oxnad1	chr14	protein_coding	oxidoreductase NAD-binding domain containing 1
chr14	31813716	31818444	+	31813716;31814088	31814025;31818444	ES	0.33	50	50	ENSMUST00000165523.8	ENSMUSG00000021906.15	Oxnad1	chr14	protein_coding	oxidoreductase NAD-binding domain containing 1
chr14	31814088	31814433	+	31814088	31818444	A3SS	0.33	50	50	ENSMUST00000165523.8	ENSMUSG00000021906.15	Oxnad1	chr14	protein_coding	oxidoreductase NAD-binding domain containing 1
chr14	31818585	31821406	+	31818585	31821491	A3SS	0.25	50	50	ENSMUST00000164868.8	ENSMUSG00000021906.15	Oxnad1	chr14	protein_coding	oxidoreductase NAD-binding domain containing 1
chr14	31818585	31824618	+	31818585	31821491	A3SS&ES	0.25	50	50	ENSMUST00000164868.8	ENSMUSG00000021906.15	Oxnad1	chr14	protein_coding	oxidoreductase NAD-binding domain containing 1
chr14	31818585	31824618	+	31818585	31821406	3pMXE	0.25	50	50	ENSMUST00000170600.8	ENSMUSG00000021906.15	Oxnad1	chr14	protein_coding	oxidoreductase NAD-binding domain containing 1
chr14	31817428	31818444	+	31813716	31818444	A5SS	0.33	50	50	ENSMUST00000169649.2	ENSMUSG00000021906.15	Oxnad1	chr14	protein_coding	oxidoreductase NAD-binding domain containing 1
chr14	31814088	31818444	+	31817428	31818444	5pMXE	0.33	50	50	ENSMUST00000170519.8	ENSMUSG00000021906.15	Oxnad1	chr14	protein_coding	oxidoreductase NAD-binding domain containing 1
chr14	31869567	31870033	+	31864031	31870033	A5SS	0.5	50	50	ENSMUST00000022464.14	ENSMUSG00000021907.14	Msmb	chr14	protein_coding	beta-microseminoprotein
chr14	31881967	31894260	+	31881967;31892859	31892705;31894260	ES	0.33	50	50	ENSMUST00000163336.8	ENSMUSG00000056234.16	Ncoa4	chr14	protein_coding	nuclear receptor coactivator 4
chr14	31894400	31894846	+	31894400;31894652	31894564;31894846	ES	0.5	50	50	ENSMUST00000163336.8	ENSMUSG00000056234.16	Ncoa4	chr14	protein_coding	nuclear receptor coactivator 4
chr14	31895447	31896350	+	31895447	31896347	A3SS	0.5	50	50	ENSMUST00000163336.8	ENSMUSG00000056234.16	Ncoa4	chr14	protein_coding	nuclear receptor coactivator 4
chr14	31887653	31892705	+	31881967	31892705	A5SS	0.2	50	50	ENSMUST00000163336.8	ENSMUSG00000056234.16	Ncoa4	chr14	protein_coding	nuclear receptor coactivator 4
chr14	31887779	31892705	+	31881967	31892705	A5SS	0.2	50	50	ENSMUST00000163336.8	ENSMUSG00000056234.16	Ncoa4	chr14	protein_coding	nuclear receptor coactivator 4
chr14	31888227	31892705	+	31881967	31892705	A5SS	0.2	50	50	ENSMUST00000163336.8	ENSMUSG00000056234.16	Ncoa4	chr14	protein_coding	nuclear receptor coactivator 4
chr14	31888676	31892705	+	31881967	31892705	A5SS	0.2	50	50	ENSMUST00000163336.8	ENSMUSG00000056234.16	Ncoa4	chr14	protein_coding	nuclear receptor coactivator 4
chr14	31892774	31894260	+	31892859	31894260	A5SS	0.33	50	50	ENSMUST00000163336.8	ENSMUSG00000056234.16	Ncoa4	chr14	protein_coding	nuclear receptor coactivator 4
chr14	31894405	31894564	+	31894400	31894564	A5SS	0.5	50	50	ENSMUST00000163336.8	ENSMUSG00000056234.16	Ncoa4	chr14	protein_coding	nuclear receptor coactivator 4
chr14	31881967;31892774	31892705;31894260	+	31881967	31894260	cassetteExon	0.5	100	100	ENSMUST00000168385.8	ENSMUSG00000056234.16	Ncoa4	chr14	protein_coding	nuclear receptor coactivator 4
chr14	31887779	31892705	+	31887653	31892705	A5SS	0.2	50	50	ENSMUST00000168334.8	ENSMUSG00000056234.16	Ncoa4	chr14	protein_coding	nuclear receptor coactivator 4
chr14	31888227	31892705	+	31887653	31892705	A5SS	0.2	50	50	ENSMUST00000168334.8	ENSMUSG00000056234.16	Ncoa4	chr14	protein_coding	nuclear receptor coactivator 4
chr14	31888676	31892705	+	31887653	31892705	A5SS	0.2	50	50	ENSMUST00000168334.8	ENSMUSG00000056234.16	Ncoa4	chr14	protein_coding	nuclear receptor coactivator 4
chr14	31894400	31894846	+	31894652	31894846	A5SS&ES	0.5	50	50	ENSMUST00000168334.8	ENSMUSG00000056234.16	Ncoa4	chr14	protein_coding	nuclear receptor coactivator 4
chr14	31887779;31888227	31888193;31892705	+	31887779	31892705	cassetteExon	0.5	100	100	ENSMUST00000111994.10	ENSMUSG00000056234.16	Ncoa4	chr14	protein_coding	nuclear receptor coactivator 4
chr14	31887779;31888676	31888193;31892705	+	31887779	31892705	cassetteExon	0.5	100	100	ENSMUST00000111994.10	ENSMUSG00000056234.16	Ncoa4	chr14	protein_coding	nuclear receptor coactivator 4
chr14	31887779;31888676	31888585;31892705	+	31887779	31892705	cassetteExon	0.5	100	100	ENSMUST00000111994.10	ENSMUSG00000056234.16	Ncoa4	chr14	protein_coding	nuclear receptor coactivator 4
chr14	31887779;31888227	31888193;31892705	+	31887779;31888676	31888585;31892705	MXE	0.5	100	100	ENSMUST00000168114.8	ENSMUSG00000056234.16	Ncoa4	chr14	protein_coding	nuclear receptor coactivator 4
chr14	31894400	31894846	+	31894400	31894564	3pMXE	0.5	50	50	ENSMUST00000168034.8	ENSMUSG00000056234.16	Ncoa4	chr14	protein_coding	nuclear receptor coactivator 4
chr14	31887779	31892705	+	31888227	31892705	5pMXE	0.2	50	50	ENSMUST00000164341.2	ENSMUSG00000056234.16	Ncoa4	chr14	protein_coding	nuclear receptor coactivator 4
chr14	31888676	31892705	+	31888227	31892705	A5SS	0.2	50	50	ENSMUST00000164341.2	ENSMUSG00000056234.16	Ncoa4	chr14	protein_coding	nuclear receptor coactivator 4
chr14	31881967	31894260	+	31892859	31894260	5pMXE	0.33	50	50	ENSMUST00000226479.2	ENSMUSG00000056234.16	Ncoa4	chr14	protein_coding	nuclear receptor coactivator 4
chr14	31881967	31894260	+	31892774	31894260	5pMXE	0.33	50	50	ENSMUST00000227498.2	ENSMUSG00000056234.16	Ncoa4	chr14	protein_coding	nuclear receptor coactivator 4
chr14	31915444	31920926	-	31915444;31915904	31915811;31920926	ES	0.33	50	50	ENSMUST00000013845.13	ENSMUSG00000013701.14	Timm23	chr14	protein_coding	translocase of inner mitochondrial membrane 23
chr14	31915408	31915811	-	31915444	31915811	A3SS	0.5	50	50	ENSMUST00000013845.13	ENSMUSG00000013701.14	Timm23	chr14	protein_coding	translocase of inner mitochondrial membrane 23
chr14	31913357	31913663	-	31913357	31915360	A5SS	0.5	50	50	ENSMUST00000013845.13	ENSMUSG00000013701.14	Timm23	chr14	protein_coding	translocase of inner mitochondrial membrane 23
chr14	31915444	31920926	-	31911211	31920926	A3SS	0.33	50	50	ENSMUST00000170331.8	ENSMUSG00000013701.14	Timm23	chr14	protein_coding	translocase of inner mitochondrial membrane 23
chr14	31915904	31920926	-	31911211	31920926	A3SS	0.33	50	50	ENSMUST00000170331.8	ENSMUSG00000013701.14	Timm23	chr14	protein_coding	translocase of inner mitochondrial membrane 23
chr14	31911211	31913299	-	31911211	31920926	A5SS	0.5	50	50	ENSMUST00000170331.8	ENSMUSG00000013701.14	Timm23	chr14	protein_coding	translocase of inner mitochondrial membrane 23
chr14	31915444	31920926	-	31915904	31920926	A3SS&ES	0.33	50	50	ENSMUST00000226683.2	ENSMUSG00000013701.14	Timm23	chr14	protein_coding	translocase of inner mitochondrial membrane 23
chr14	31936607;31939395	31939340;31939617	+	31936607	31939617	cassetteExon	0.5	100	100	ENSMUST00000164137.8	ENSMUSG00000021911.17	Parg	chr14	protein_coding	poly (ADP-ribose) glycohydrolase
chr14	31930180	31930649	+	31930180	31930669	A3SS	0.5	50	50	ENSMUST00000164137.8	ENSMUSG00000021911.17	Parg	chr14	protein_coding	poly (ADP-ribose) glycohydrolase
chr14	31924142	31930114	+	31924422	31930114	A5SS	0.5	50	50	ENSMUST00000164137.8	ENSMUSG00000021911.17	Parg	chr14	protein_coding	poly (ADP-ribose) glycohydrolase
chr14	31924142	31936281	+	31932595	31936281	A5SS&ES	0.33	50	50	ENSMUST00000164137.8	ENSMUSG00000021911.17	Parg	chr14	protein_coding	poly (ADP-ribose) glycohydrolase
chr14	32003892	32006056	+	31996915	32006056	A5SS	0.5	50	50	ENSMUST00000163350.8	ENSMUSG00000021911.17	Parg	chr14	protein_coding	poly (ADP-ribose) glycohydrolase
chr14	31924142	31930114	+	31924142	31936281	A3SS	0.5	50	50	ENSMUST00000170840.9	ENSMUSG00000021911.17	Parg	chr14	protein_coding	poly (ADP-ribose) glycohydrolase
chr14	31924422	31936281	+	31924142	31936281	A5SS	0.33	50	50	ENSMUST00000170840.9	ENSMUSG00000021911.17	Parg	chr14	protein_coding	poly (ADP-ribose) glycohydrolase
chr14	31924422	31930114	+	31924422	31936281	A3SS	0.5	50	50	ENSMUST00000170129.8	ENSMUSG00000021911.17	Parg	chr14	protein_coding	poly (ADP-ribose) glycohydrolase
chr14	31932595	31936281	+	31924422	31936281	A5SS	0.33	50	50	ENSMUST00000170129.8	ENSMUSG00000021911.17	Parg	chr14	protein_coding	poly (ADP-ribose) glycohydrolase
chr14	32027234	32029066	+	32023963	32029066	A5SS	0.5	50	50	ENSMUST00000227042.2	ENSMUSG00000115813.2	Gm46447	chr14	lncRNA	predicted gene, 46447
chr14	32049106	32049601	+	32049106	32054138	A3SS	0.5	50	50	ENSMUST00000022480.8	ENSMUSG00000021913.9	Ogdhl	chr14	protein_coding	oxoglutarate dehydrogenase-like
chr14	32047389	32047751	+	32045904	32047751	A5SS	0.5	50	50	ENSMUST00000022480.8	ENSMUSG00000021913.9	Ogdhl	chr14	protein_coding	oxoglutarate dehydrogenase-like
chr14	32180668	32187764	-	32180668;32182870	32182682;32187764	ES	0.5	50	50	ENSMUST00000070125.6	ENSMUSG00000021919.9	Chat	chr14	protein_coding	choline acetyltransferase
chr14	32180668	32183899	-	32180668	32182682	A5SS&ES	0.25	50	50	ENSMUST00000070125.6	ENSMUSG00000021919.9	Chat	chr14	protein_coding	choline acetyltransferase
chr14	32180668	32187843	-	32180668	32182682	A5SS&ES	0.25	50	50	ENSMUST00000070125.6	ENSMUSG00000021919.9	Chat	chr14	protein_coding	choline acetyltransferase
chr14	32182870	32183899	-	32182870	32187764	A5SS	0.33	50	50	ENSMUST00000070125.6	ENSMUSG00000021919.9	Chat	chr14	protein_coding	choline acetyltransferase
chr14	32182870	32187843	-	32182870	32187764	A5SS	0.33	50	50	ENSMUST00000070125.6	ENSMUSG00000021919.9	Chat	chr14	protein_coding	choline acetyltransferase
chr14	32180668	32187764	-	32180668	32182682	5pMXE	0.25	50	50	ENSMUST00000227579.2	ENSMUSG00000021919.9	Chat	chr14	protein_coding	choline acetyltransferase
chr14	32180668	32183899	-	32180668	32187764	A5SS	0.25	50	50	ENSMUST00000226365.2	ENSMUSG00000021919.9	Chat	chr14	protein_coding	choline acetyltransferase
chr14	32180668	32187843	-	32180668	32187764	A5SS	0.25	50	50	ENSMUST00000226365.2	ENSMUSG00000021919.9	Chat	chr14	protein_coding	choline acetyltransferase
chr14	32180668	32183899	-	32180668;32182870	32182682;32183899	ES	0.5	50	50	ENSMUST00000228420.2	ENSMUSG00000021919.9	Chat	chr14	protein_coding	choline acetyltransferase
chr14	32182870	32187843	-	32182870	32183899	5pMXE	0.33	50	50	ENSMUST00000228420.2	ENSMUSG00000021919.9	Chat	chr14	protein_coding	choline acetyltransferase
chr14	32180668	32187843	-	32180668	32183899	5pMXE	0.25	50	50	ENSMUST00000228256.2	ENSMUSG00000021919.9	Chat	chr14	protein_coding	choline acetyltransferase
chr14	32180668;32182870	32182682;32187843	-	32180668	32187843	cassetteExon	0.5	100	100	ENSMUST00000226351.2	ENSMUSG00000021919.9	Chat	chr14	protein_coding	choline acetyltransferase
chr14	32187240	32198559	+	32187240	32204630	A3SS	0.5	50	50	ENSMUST00000180662.3	ENSMUSG00000097794.3	Gm2990	chr14	lncRNA	predicted gene 2990
chr14	32282782	32288200	+	32282782;32284608	32284513;32288200	ES	0.5	50	50	ENSMUST00000066807.8	ENSMUSG00000054051.8	Ercc6	chr14	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 6
chr14	32274667;32277412	32277193;32279796	+	32274667	32279796	cassetteExon	0.5	100	100	ENSMUST00000066807.8	ENSMUSG00000054051.8	Ercc6	chr14	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 6
chr14	32257625	32263183	+	32248835	32263183	A5SS	0.5	50	50	ENSMUST00000066807.8	ENSMUSG00000054051.8	Ercc6	chr14	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 6
chr14	32270162	32274532	+	32268860	32274532	A5SS	0.5	50	50	ENSMUST00000066807.8	ENSMUSG00000054051.8	Ercc6	chr14	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 6
chr14	32330410	32370436	+	32330410;32369149	32368998;32370436	ES	0.5	50	50	ENSMUST00000187377.7	ENSMUSG00000041730.15	Prrxl1	chr14	protein_coding	paired related homeobox protein-like 1
chr14	32330410	32350692	+	32330410	32368998	A3SS	0.33	50	50	ENSMUST00000187377.7	ENSMUSG00000041730.15	Prrxl1	chr14	protein_coding	paired related homeobox protein-like 1
chr14	32321689	32321903	+	32321503	32321903	A5SS	0.5	50	50	ENSMUST00000187377.7	ENSMUSG00000041730.15	Prrxl1	chr14	protein_coding	paired related homeobox protein-like 1
chr14	32330410	32370436	+	32330410	32350692	3pMXE	0.33	50	50	ENSMUST00000189022.8	ENSMUSG00000041730.15	Prrxl1	chr14	protein_coding	paired related homeobox protein-like 1
chr14	32389896	32390310	-	32389896	32390314	A5SS	0.5	50	50	ENSMUST00000096038.4	ENSMUSG00000071540.5	3425401B19Rik	chr14	protein_coding	RIKEN cDNA 3425401B19 gene
chr14	32527134	32530306	+	32527134;32528868	32528737;32530306	ES	0.5	50	50	ENSMUST00000039191.8	ENSMUSG00000041707.9	Tmem273	chr14	protein_coding	transmembrane protein 273
chr14	32508053	32527081	+	32508053	32538804	A3SS	0.5	50	50	ENSMUST00000228481.2	ENSMUSG00000041707.9	Tmem273	chr14	protein_coding	transmembrane protein 273
chr14	32530336	32538804	+	32508053	32538804	A5SS	0.5	50	50	ENSMUST00000228481.2	ENSMUSG00000041707.9	Tmem273	chr14	protein_coding	transmembrane protein 273
chr14	32884916	32907330	-	32884916	32906825	5pMXE	0.5	50	50	ENSMUST00000130509.10	ENSMUSG00000051506.18	Wdfy4	chr14	protein_coding	WD repeat and FYVE domain containing 4
chr14	32760680	32763111	-	32760695	32763111	A3SS	0.5	50	50	ENSMUST00000130509.10	ENSMUSG00000051506.18	Wdfy4	chr14	protein_coding	WD repeat and FYVE domain containing 4
chr14	32800313	32805597	-	32802759	32805597	A3SS&ES	0.5	50	50	ENSMUST00000130509.10	ENSMUSG00000051506.18	Wdfy4	chr14	protein_coding	WD repeat and FYVE domain containing 4
chr14	32829754	32831460	-	32830665	32831460	A3SS&ES	0.5	50	50	ENSMUST00000130509.10	ENSMUSG00000051506.18	Wdfy4	chr14	protein_coding	WD repeat and FYVE domain containing 4
chr14	32713498;32714266	32714134;32717168	+	32713498	32717168	cassetteExon	0.5	100	100	ENSMUST00000038956.12	ENSMUSG00000041673.13	Lrrc18	chr14	protein_coding	leucine rich repeat containing 18
chr14	32717265;32729046	32728970;32730365	+	32717265	32730365	cassetteExon	0.5	100	100	ENSMUST00000038956.12	ENSMUSG00000041673.13	Lrrc18	chr14	protein_coding	leucine rich repeat containing 18
chr14	32731226;32734754	32734619;32735782	+	32731226	32735782	cassetteExon	0.5	100	100	ENSMUST00000038956.12	ENSMUSG00000041673.13	Lrrc18	chr14	protein_coding	leucine rich repeat containing 18
chr14	32717265	32722208	+	32717265	32730365	A3SS	0.33	50	50	ENSMUST00000038956.12	ENSMUSG00000041673.13	Lrrc18	chr14	protein_coding	leucine rich repeat containing 18
chr14	32717265;32722282	32722208;32728970	+	32717265	32728970	cassetteExon	0.5	100	100	ENSMUST00000120588.8	ENSMUSG00000041673.13	Lrrc18	chr14	protein_coding	leucine rich repeat containing 18
chr14	32938802	32938909	+	32936250	32938909	A5SS	0.5	50	50	ENSMUST00000165792.3	ENSMUSG00000063506.15	Arhgap22	chr14	protein_coding	Rho GTPase activating protein 22
chr14	32972694	32993741	+	32939068	32993741	A5SS	0.5	50	50	ENSMUST00000111956.9	ENSMUSG00000063506.15	Arhgap22	chr14	protein_coding	Rho GTPase activating protein 22
chr14	33028230	33065186	+	33020748	33065186	A5SS	0.33	50	50	ENSMUST00000111956.9	ENSMUSG00000063506.15	Arhgap22	chr14	protein_coding	Rho GTPase activating protein 22
chr14	33041889	33065186	+	33020748	33065186	A5SS	0.33	50	50	ENSMUST00000111956.9	ENSMUSG00000063506.15	Arhgap22	chr14	protein_coding	Rho GTPase activating protein 22
chr14	33073389	33081075	+	33065314	33081075	A5SS	0.5	50	50	ENSMUST00000111956.9	ENSMUSG00000063506.15	Arhgap22	chr14	protein_coding	Rho GTPase activating protein 22
chr14	33084480	33085233	+	33084532	33085233	A5SS	0.5	50	50	ENSMUST00000111956.9	ENSMUSG00000063506.15	Arhgap22	chr14	protein_coding	Rho GTPase activating protein 22
chr14	33086482	33088527	+	33086471	33088527	A5SS	0.5	50	50	ENSMUST00000111956.9	ENSMUSG00000063506.15	Arhgap22	chr14	protein_coding	Rho GTPase activating protein 22
chr14	33041889	33065186	+	33028230	33065186	A5SS	0.33	50	50	ENSMUST00000137590.8	ENSMUSG00000063506.15	Arhgap22	chr14	protein_coding	Rho GTPase activating protein 22
chr14	33081282	33084400	+	33081282	33086350	A3SS	0.5	50	50	ENSMUST00000111955.2	ENSMUSG00000063506.15	Arhgap22	chr14	protein_coding	Rho GTPase activating protein 22
chr14	33085306	33086350	+	33081282	33086350	A5SS	0.5	50	50	ENSMUST00000111955.2	ENSMUSG00000063506.15	Arhgap22	chr14	protein_coding	Rho GTPase activating protein 22
chr14	33124880	33132813	-	33124880;33130134	33130005;33132813	ES	0.5	50	50	ENSMUST00000111945.9	ENSMUSG00000021936.15	Mapk8	chr14	protein_coding	mitogen-activated protein kinase 8
chr14	33110939;33112270	33112199;33114899	-	33110939;33112701	33112630;33114899	MXE	0.5	100	100	ENSMUST00000111945.9	ENSMUSG00000021936.15	Mapk8	chr14	protein_coding	mitogen-activated protein kinase 8
chr14	33104276	33105831	-	33104281	33105831	A3SS	0.5	50	50	ENSMUST00000111945.9	ENSMUSG00000021936.15	Mapk8	chr14	protein_coding	mitogen-activated protein kinase 8
chr14	33109249	33110757	-	33109253	33110757	A3SS	0.5	50	50	ENSMUST00000111945.9	ENSMUSG00000021936.15	Mapk8	chr14	protein_coding	mitogen-activated protein kinase 8
chr14	33110783	33114899	-	33112701	33114899	A3SS&ES	0.33	50	50	ENSMUST00000111945.9	ENSMUSG00000021936.15	Mapk8	chr14	protein_coding	mitogen-activated protein kinase 8
chr14	33110783	33114899	-	33112270	33114899	A3SS&ES	0.33	50	50	ENSMUST00000022504.12	ENSMUSG00000021936.15	Mapk8	chr14	protein_coding	mitogen-activated protein kinase 8
chr14	33110939	33112630	-	33110939	33112199	5pMXE	0.5	50	50	ENSMUST00000150659.8	ENSMUSG00000021936.15	Mapk8	chr14	protein_coding	mitogen-activated protein kinase 8
chr14	33124880	33132813	-	33130134	33132813	3pMXE	0.5	50	50	ENSMUST00000132379.2	ENSMUSG00000021936.15	Mapk8	chr14	protein_coding	mitogen-activated protein kinase 8
chr14	33193789	33217532	+	33193789;33205639	33205458;33217532	ES	0.5	50	50	ENSMUST00000208853.2	ENSMUSG00000108841.2	Frmpd2	chr14	protein_coding	FERM and PDZ domain containing 2
chr14	33288066	33292767	+	33288066	33293693	A3SS	0.5	50	50	ENSMUST00000208577.2	ENSMUSG00000108841.2	Frmpd2	chr14	protein_coding	FERM and PDZ domain containing 2
chr14	33287280	33287723	+	33276894	33287723	A5SS	0.5	50	50	ENSMUST00000208577.2	ENSMUSG00000108841.2	Frmpd2	chr14	protein_coding	FERM and PDZ domain containing 2
chr14	33288066	33292767	+	33287837	33292767	A5SS	0.5	50	50	ENSMUST00000207581.2	ENSMUSG00000108841.2	Frmpd2	chr14	protein_coding	FERM and PDZ domain containing 2
chr14	33329584	33336390	+	33329584;33334350	33334253;33336390	ES	0.5	50	50	ENSMUST00000022508.8	ENSMUSG00000021940.11	Ptpn20	chr14	protein_coding	protein tyrosine phosphatase, non-receptor type 20
chr14	33336523;33343893	33343808;33344439	+	33336523	33344439	cassetteExon	0.5	100	100	ENSMUST00000022508.8	ENSMUSG00000021940.11	Ptpn20	chr14	protein_coding	protein tyrosine phosphatase, non-receptor type 20
chr14	33346946;33349056	33348958;33354863	+	33346946;33353198	33352864;33354863	MXE	0.5	100	100	ENSMUST00000022508.8	ENSMUSG00000021940.11	Ptpn20	chr14	protein_coding	protein tyrosine phosphatase, non-receptor type 20
chr14	33344576	33346856	+	33344587	33346856	A5SS	0.5	50	50	ENSMUST00000022508.8	ENSMUSG00000021940.11	Ptpn20	chr14	protein_coding	protein tyrosine phosphatase, non-receptor type 20
chr14	33346946	33348958	+	33346946	33352864	A3SS	0.5	50	50	ENSMUST00000227887.2	ENSMUSG00000021940.11	Ptpn20	chr14	protein_coding	protein tyrosine phosphatase, non-receptor type 20
chr14	33532081	33532938	-	33532081	33533216	A5SS	0.5	50	50	ENSMUST00000228030.2	ENSMUSG00000115751.2	4930503F20Rik	chr14	lncRNA	RIKEN cDNA 4930503F20 gene
chr14	33739465	33748773	+	33738740	33748773	A5SS	0.5	50	50	ENSMUST00000227383.2	ENSMUSG00000072624.4	Gm5460	chr14	protein_coding	predicted gene 5460
chr14	33777046	33824555	-	33773540	33824555	A3SS	0.5	50	50	ENSMUST00000215823.2	ENSMUSG00000095493.3	A630023A22Rik	chr14	protein_coding	RIKEN cDNA A630023A22 gene
chr14	33773540	33774427	-	33773540	33824555	A5SS	0.5	50	50	ENSMUST00000215823.2	ENSMUSG00000095493.3	A630023A22Rik	chr14	protein_coding	RIKEN cDNA A630023A22 gene
chr14	33775327	33775702	+	33774758	33775702	A5SS	0.5	50	50	ENSMUST00000226211.2	ENSMUSG00000047441.5	Antxrl	chr14	protein_coding	anthrax toxin receptor-like
chr14	33816370	33816680	+	33816448	33816680	A5SS	0.5	50	50	ENSMUST00000022519.15	ENSMUSG00000021950.16	Anxa8	chr14	protein_coding	annexin A8
chr14	33917774;33920670	33920529;33923367	-	33917774	33923367	cassetteExon	0.5	100	100	ENSMUST00000226613.2	ENSMUSG00000071531.4	Gprin2	chr14	protein_coding	G protein regulated inducer of neurite outgrowth 2
chr14	33917774	33923575	-	33917774	33923367	A5SS	0.33	50	50	ENSMUST00000226613.2	ENSMUSG00000071531.4	Gprin2	chr14	protein_coding	G protein regulated inducer of neurite outgrowth 2
chr14	33917774	33920529	-	33917774	33923575	A5SS	0.33	50	50	ENSMUST00000226511.2	ENSMUSG00000071531.4	Gprin2	chr14	protein_coding	G protein regulated inducer of neurite outgrowth 2
chr14	33990909	34030997	-	33990909;33991493	33991428;34030997	ES	0.25	50	50	ENSMUST00000111917.3	ENSMUSG00000041471.10	Shld2	chr14	protein_coding	shieldin complex subunit 2
chr14	33990909;33995533	33995444;34030997	-	33990909;33991493	33991428;34030997	MXE	0.5	100	100	ENSMUST00000111917.3	ENSMUSG00000041471.10	Shld2	chr14	protein_coding	shieldin complex subunit 2
chr14	33991493;33995533	33995444;34030997	-	33991493	34030997	cassetteExon	0.5	100	100	ENSMUST00000111917.3	ENSMUSG00000041471.10	Shld2	chr14	protein_coding	shieldin complex subunit 2
chr14	33990909	34009049	-	33990909	33991428	A5SS&ES	0.25	50	50	ENSMUST00000111917.3	ENSMUSG00000041471.10	Shld2	chr14	protein_coding	shieldin complex subunit 2
chr14	33990909	34030997	-	33971328	34030997	A3SS	0.25	50	50	ENSMUST00000228704.2	ENSMUSG00000041471.10	Shld2	chr14	protein_coding	shieldin complex subunit 2
chr14	33991493	34030997	-	33971328	34030997	A3SS	0.25	50	50	ENSMUST00000228704.2	ENSMUSG00000041471.10	Shld2	chr14	protein_coding	shieldin complex subunit 2
chr14	33995533	34030997	-	33971328	34030997	A3SS	0.25	50	50	ENSMUST00000228704.2	ENSMUSG00000041471.10	Shld2	chr14	protein_coding	shieldin complex subunit 2
chr14	33971328	33981582	-	33971328	34030997	A5SS	0.5	50	50	ENSMUST00000228704.2	ENSMUSG00000041471.10	Shld2	chr14	protein_coding	shieldin complex subunit 2
chr14	33990909	34030997	-	33990909	34009049	5pMXE	0.25	50	50	ENSMUST00000228626.2	ENSMUSG00000041471.10	Shld2	chr14	protein_coding	shieldin complex subunit 2
chr14	33990909	33995444	-	33990909	34009049	A5SS	0.25	50	50	ENSMUST00000228626.2	ENSMUSG00000041471.10	Shld2	chr14	protein_coding	shieldin complex subunit 2
chr14	33990909;33995533	33995444;34030997	-	33990909	34030997	cassetteExon	0.5	100	100	ENSMUST00000227375.2	ENSMUSG00000041471.10	Shld2	chr14	protein_coding	shieldin complex subunit 2
chr14	33990909	33995444	-	33990909;33991493	33991428;33995444	ES	0.5	50	50	ENSMUST00000228337.2	ENSMUSG00000041471.10	Shld2	chr14	protein_coding	shieldin complex subunit 2
chr14	33995533	34030997	-	33995533	34019116	5pMXE	0.33	50	50	ENSMUST00000228337.2	ENSMUSG00000041471.10	Shld2	chr14	protein_coding	shieldin complex subunit 2
chr14	33995533	33996140	-	33995533	34019116	A5SS	0.33	50	50	ENSMUST00000228337.2	ENSMUSG00000041471.10	Shld2	chr14	protein_coding	shieldin complex subunit 2
chr14	33995533	34030997	-	33995533	33996140	5pMXE	0.33	50	50	ENSMUST00000227006.2	ENSMUSG00000041471.10	Shld2	chr14	protein_coding	shieldin complex subunit 2
chr14	33990909	34030997	-	33995533	34030997	3pMXE	0.25	50	50	ENSMUST00000228132.2	ENSMUSG00000041471.10	Shld2	chr14	protein_coding	shieldin complex subunit 2
chr14	33991493	34030997	-	33995533	34030997	3pMXE	0.25	50	50	ENSMUST00000228132.2	ENSMUSG00000041471.10	Shld2	chr14	protein_coding	shieldin complex subunit 2
chr14	34061975	34063763	+	34061975	34064076	A3SS	0.5	50	50	ENSMUST00000022322.17	ENSMUSG00000021794.17	Glud1	chr14	protein_coding	glutamate dehydrogenase 1
chr14	34054196	34056069	+	34051340	34056069	A5SS	0.5	50	50	ENSMUST00000022322.17	ENSMUSG00000021794.17	Glud1	chr14	protein_coding	glutamate dehydrogenase 1
chr14	34058533	34064076	+	34058533	34060717	3pMXE	0.5	50	50	ENSMUST00000159784.8	ENSMUSG00000021794.17	Glud1	chr14	protein_coding	glutamate dehydrogenase 1
chr14	34061975	34064076	+	34058533	34064076	A5SS	0.5	50	50	ENSMUST00000163955.2	ENSMUSG00000021794.17	Glud1	chr14	protein_coding	glutamate dehydrogenase 1
chr14	34097735	34118329	+	34097735;34118250	34118122;34118329	ES	0.5	50	50	ENSMUST00000111908.3	ENSMUSG00000041445.10	Mmrn2	chr14	protein_coding	multimerin 2
chr14	34182569	34225131	-	34182569	34224352	5pMXE	0.33	50	50	ENSMUST00000049005.15	ENSMUSG00000021796.16	Bmpr1a	chr14	protein_coding	bone morphogenetic protein receptor, type 1A
chr14	34182569;34208298	34208162;34224352	-	34182569	34224352	cassetteExon	0.5	100	100	ENSMUST00000049005.15	ENSMUSG00000021796.16	Bmpr1a	chr14	protein_coding	bone morphogenetic protein receptor, type 1A
chr14	34182569	34208162	-	34182569	34225131	A5SS	0.33	50	50	ENSMUST00000171343.9	ENSMUSG00000021796.16	Bmpr1a	chr14	protein_coding	bone morphogenetic protein receptor, type 1A
chr14	34274279	34288814	-	34274279;34277485	34277300;34288814	ES	0.33	50	50	ENSMUST00000022327.13	ENSMUSG00000021798.15	Ldb3	chr14	protein_coding	LIM domain binding 3
chr14	34289524;34293878	34293675;34298943	-	34289524	34298943	cassetteExon	0.5	100	100	ENSMUST00000022327.13	ENSMUSG00000021798.15	Ldb3	chr14	protein_coding	LIM domain binding 3
chr14	34283838	34288814	-	34277485	34288814	A3SS	0.33	50	50	ENSMUST00000022327.13	ENSMUSG00000021798.15	Ldb3	chr14	protein_coding	LIM domain binding 3
chr14	34294969	34300552	-	34299301	34300552	A3SS&ES	0.5	50	50	ENSMUST00000022327.13	ENSMUSG00000021798.15	Ldb3	chr14	protein_coding	LIM domain binding 3
chr14	34289524	34291670	-	34289524	34298943	A5SS	0.33	50	50	ENSMUST00000022327.13	ENSMUSG00000021798.15	Ldb3	chr14	protein_coding	LIM domain binding 3
chr14	34289524	34293675	-	34289524;34291684	34291670;34293675	ES	0.5	50	50	ENSMUST00000090040.12	ENSMUSG00000021798.15	Ldb3	chr14	protein_coding	LIM domain binding 3
chr14	34289524;34299301	34298943;34300552	-	34289524;34294969	34291670;34300552	MXE	0.5	100	100	ENSMUST00000090040.12	ENSMUSG00000021798.15	Ldb3	chr14	protein_coding	LIM domain binding 3
chr14	34293878;34299301	34298943;34300552	-	34293878;34294969	34294947;34300552	MXE	0.5	100	100	ENSMUST00000090040.12	ENSMUSG00000021798.15	Ldb3	chr14	protein_coding	LIM domain binding 3
chr14	34283838	34288814	-	34274279	34288814	A3SS	0.33	50	50	ENSMUST00000022328.14	ENSMUSG00000021798.15	Ldb3	chr14	protein_coding	LIM domain binding 3
chr14	34289524;34299301	34298943;34300552	-	34289524;34294969	34293675;34300552	MXE	0.5	100	100	ENSMUST00000064098.14	ENSMUSG00000021798.15	Ldb3	chr14	protein_coding	LIM domain binding 3
chr14	34289524	34298943	-	34293878	34298943	3pMXE	0.5	50	50	ENSMUST00000226226.2	ENSMUSG00000021798.15	Ldb3	chr14	protein_coding	LIM domain binding 3
chr14	34293878	34294947	-	34293878	34298943	A5SS	0.5	50	50	ENSMUST00000226226.2	ENSMUSG00000021798.15	Ldb3	chr14	protein_coding	LIM domain binding 3
chr14	34313287	34313705	-	34313287	34314910	A5SS	0.5	50	50	ENSMUST00000168444.9	ENSMUSG00000021799.10	Opn4	chr14	protein_coding	opsin 4 (melanopsin)
chr14	34459343	34461188	+	34459343;34459977	34459813;34461188	ES	0.5	50	50	ENSMUST00000048263.14	ENSMUSG00000041408.19	Wapl	chr14	protein_coding	WAPL cohesin release factor
chr14	34414691	34416962	+	34414691	34416944	A3SS	0.5	50	50	ENSMUST00000048263.14	ENSMUSG00000041408.19	Wapl	chr14	protein_coding	WAPL cohesin release factor
chr14	34459977	34461269	+	34459977	34461188	A3SS	0.5	50	50	ENSMUST00000048263.14	ENSMUSG00000041408.19	Wapl	chr14	protein_coding	WAPL cohesin release factor
chr14	34416403	34416944	+	34414691	34416944	A5SS	0.5	50	50	ENSMUST00000048263.14	ENSMUSG00000041408.19	Wapl	chr14	protein_coding	WAPL cohesin release factor
chr14	34431198	34444221	+	34417062	34444221	A5SS	0.5	50	50	ENSMUST00000048263.14	ENSMUSG00000041408.19	Wapl	chr14	protein_coding	WAPL cohesin release factor
chr14	34459343	34461188	+	34459343	34459813	A3SS&ES	0.5	50	50	ENSMUST00000174559.3	ENSMUSG00000041408.19	Wapl	chr14	protein_coding	WAPL cohesin release factor
chr14	34485258	34485490	+	34485258	34490453	A3SS	0.5	50	50	ENSMUST00000181044.2	ENSMUSG00000097310.3	A930038B10Rik	chr14	lncRNA	RIKEN cDNA A930038B10 gene
chr14	35174356	35205597	+	35174356	35242646	A3SS	0.5	50	50	ENSMUST00000043349.7	ENSMUSG00000041078.8	Grid1	chr14	protein_coding	glutamate receptor, ionotropic, delta 1
chr14	35292041	35302338	+	35291695	35302338	A5SS	0.5	50	50	ENSMUST00000043349.7	ENSMUSG00000041078.8	Grid1	chr14	protein_coding	glutamate receptor, ionotropic, delta 1
chr14	35817451	35820220	+	35817451	35818354	A3SS	0.5	50	50	ENSMUST00000226305.2	ENSMUSG00000096405.4	4930474N05Rik	chr14	protein_coding	RIKEN cDNA 4930474N05 gene
chr14	35817099	35817279	+	35817128	35817279	A5SS	0.5	50	50	ENSMUST00000226305.2	ENSMUSG00000096405.4	4930474N05Rik	chr14	protein_coding	RIKEN cDNA 4930474N05 gene
chr14	36601719;36612383	36612251;36618212	-	36601719	36618212	cassetteExon	0.5	100	100	ENSMUST00000067700.13	ENSMUSG00000058690.15	Ccser2	chr14	protein_coding	coiled-coil serine rich 2
chr14	36601719;36612383	36612299;36618212	-	36601719	36618212	cassetteExon	0.5	100	100	ENSMUST00000067700.13	ENSMUSG00000058690.15	Ccser2	chr14	protein_coding	coiled-coil serine rich 2
chr14	36622802;36626963	36626884;36630974	-	36622802	36630974	cassetteExon	0.5	100	100	ENSMUST00000067700.13	ENSMUSG00000058690.15	Ccser2	chr14	protein_coding	coiled-coil serine rich 2
chr14	36601719	36607708	-	36601719	36618212	A5SS	0.2	50	50	ENSMUST00000067700.13	ENSMUSG00000058690.15	Ccser2	chr14	protein_coding	coiled-coil serine rich 2
chr14	36622802	36628167	-	36622802	36630974	A5SS	0.33	50	50	ENSMUST00000067700.13	ENSMUSG00000058690.15	Ccser2	chr14	protein_coding	coiled-coil serine rich 2
chr14	36640553	36641182	-	36640553	36648796	A5SS	0.5	50	50	ENSMUST00000067700.13	ENSMUSG00000058690.15	Ccser2	chr14	protein_coding	coiled-coil serine rich 2
chr14	36648886	36657482	-	36648886	36660541	A5SS	0.5	50	50	ENSMUST00000067700.13	ENSMUSG00000058690.15	Ccser2	chr14	protein_coding	coiled-coil serine rich 2
chr14	36601719;36607747	36607708;36612299	-	36601719	36612299	cassetteExon	0.5	100	100	ENSMUST00000090024.11	ENSMUSG00000058690.15	Ccser2	chr14	protein_coding	coiled-coil serine rich 2
chr14	36601719	36612251	-	36601719	36612299	A5SS	0.2	50	50	ENSMUST00000090024.11	ENSMUSG00000058690.15	Ccser2	chr14	protein_coding	coiled-coil serine rich 2
chr14	36622802	36626884	-	36622802	36628167	A5SS	0.33	50	50	ENSMUST00000183007.2	ENSMUSG00000058690.15	Ccser2	chr14	protein_coding	coiled-coil serine rich 2
chr14	36601719	36612251	-	36601719	36607708	A5SS&ES	0.25	50	50	ENSMUST00000183316.8	ENSMUSG00000058690.15	Ccser2	chr14	protein_coding	coiled-coil serine rich 2
chr14	36631169	36640391	-	36601719	36640391	A3SS	0.5	50	50	ENSMUST00000182576.2	ENSMUSG00000058690.15	Ccser2	chr14	protein_coding	coiled-coil serine rich 2
chr14	36601719	36607708	-	36601719	36640391	A5SS	0.2	50	50	ENSMUST00000182576.2	ENSMUSG00000058690.15	Ccser2	chr14	protein_coding	coiled-coil serine rich 2
chr14	36601719	36612251	-	36601719	36640391	A5SS	0.2	50	50	ENSMUST00000182576.2	ENSMUSG00000058690.15	Ccser2	chr14	protein_coding	coiled-coil serine rich 2
chr14	36601719	36612299	-	36601719	36640391	A5SS	0.2	50	50	ENSMUST00000182576.2	ENSMUSG00000058690.15	Ccser2	chr14	protein_coding	coiled-coil serine rich 2
chr14	36601719	36618212	-	36601719	36640391	A5SS	0.2	50	50	ENSMUST00000182576.2	ENSMUSG00000058690.15	Ccser2	chr14	protein_coding	coiled-coil serine rich 2
chr14	36601719	36612299	-	36601719	36607708	5pMXE	0.2	50	50	ENSMUST00000182558.2	ENSMUSG00000058690.15	Ccser2	chr14	protein_coding	coiled-coil serine rich 2
chr14	36766686	36768798	-	36766686;36767783	36767662;36768798	ES	0.5	50	50	ENSMUST00000225070.2	ENSMUSG00000021804.7	Rgr	chr14	protein_coding	retinal G protein coupled receptor
chr14	36760324	36764530	-	36760925	36764530	A3SS	0.5	50	50	ENSMUST00000225070.2	ENSMUSG00000021804.7	Rgr	chr14	protein_coding	retinal G protein coupled receptor
chr14	36768904	36770806	-	36768954	36770806	A3SS	0.5	50	50	ENSMUST00000225070.2	ENSMUSG00000021804.7	Rgr	chr14	protein_coding	retinal G protein coupled receptor
chr14	36766686	36766825	-	36766686	36767662	A5SS	0.33	50	50	ENSMUST00000225070.2	ENSMUSG00000021804.7	Rgr	chr14	protein_coding	retinal G protein coupled receptor
chr14	36760324	36764530	-	36760324;36760925	36760812;36764530	ES	0.5	50	50	ENSMUST00000022338.7	ENSMUSG00000021804.7	Rgr	chr14	protein_coding	retinal G protein coupled receptor
chr14	36766686	36768798	-	36766686	36766825	5pMXE	0.33	50	50	ENSMUST00000224506.2	ENSMUSG00000021804.7	Rgr	chr14	protein_coding	retinal G protein coupled receptor
chr14	36790141	36790433	+	36790011	36790433	A5SS	0.5	50	50	ENSMUST00000224104.2	ENSMUSG00000043418.5	Lrit2	chr14	protein_coding	leucine-rich repeat, immunoglobulin-like and transmembrane domains 2
chr14	36829411	36831936	-	36829411	36835908	A5SS	0.5	50	50	ENSMUST00000191317.2	ENSMUSG00000096001.3	2610528A11Rik	chr14	protein_coding	RIKEN cDNA 2610528A11 gene
chr14	36855760	36856744	-	36855760	36857152	A5SS	0.33	50	50	ENSMUST00000165649.4	ENSMUSG00000041028.17	Ghitm	chr14	protein_coding	growth hormone inducible transmembrane protein
chr14	36855760	36856922	-	36855760	36857152	A5SS	0.33	50	50	ENSMUST00000165649.4	ENSMUSG00000041028.17	Ghitm	chr14	protein_coding	growth hormone inducible transmembrane protein
chr14	36855760	36856744	-	36855760	36856922	A5SS	0.33	50	50	ENSMUST00000042564.17	ENSMUSG00000041028.17	Ghitm	chr14	protein_coding	growth hormone inducible transmembrane protein
chr14	38092997	38098291	-	38092997;38093305	38093234;38098291	ES	0.5	50	50	ENSMUST00000166968.9	ENSMUSG00000041014.18	Nrg3	chr14	protein_coding	neuregulin 3
chr14	38098464	38103581	-	38098440	38103581	A3SS	0.5	50	50	ENSMUST00000166968.9	ENSMUSG00000041014.18	Nrg3	chr14	protein_coding	neuregulin 3
chr14	40564547	40582549	-	40564547	40574912	5pMXE	0.5	50	50	ENSMUST00000070328.10	ENSMUSG00000037833.15	Sh2d4b	chr14	protein_coding	SH2 domain containing 4B
chr14	40726177	40735655	-	40726160	40735655	A3SS	0.5	50	50	ENSMUST00000022317.15	ENSMUSG00000021792.16	Prxl2a	chr14	protein_coding	peroxiredoxin like 2A
chr14	40726160	40726846	-	40726160	40735655	A5SS	0.16	50	50	ENSMUST00000022317.15	ENSMUSG00000021792.16	Prxl2a	chr14	protein_coding	peroxiredoxin like 2A
chr14	40726160	40727598	-	40726160	40735655	A5SS	0.16	50	50	ENSMUST00000022317.15	ENSMUSG00000021792.16	Prxl2a	chr14	protein_coding	peroxiredoxin like 2A
chr14	40726160	40728755	-	40726160	40735655	A5SS	0.16	50	50	ENSMUST00000022317.15	ENSMUSG00000021792.16	Prxl2a	chr14	protein_coding	peroxiredoxin like 2A
chr14	40726160	40730156	-	40726160	40735655	A5SS	0.16	50	50	ENSMUST00000022317.15	ENSMUSG00000021792.16	Prxl2a	chr14	protein_coding	peroxiredoxin like 2A
chr14	40726160	40735583	-	40726160	40735655	A5SS	0.16	50	50	ENSMUST00000022317.15	ENSMUSG00000021792.16	Prxl2a	chr14	protein_coding	peroxiredoxin like 2A
chr14	40726177	40735583	-	40726177	40735655	A5SS	0.5	50	50	ENSMUST00000118466.8	ENSMUSG00000021792.16	Prxl2a	chr14	protein_coding	peroxiredoxin like 2A
chr14	40726160	40735583	-	40726160	40730156	5pMXE	0.16	50	50	ENSMUST00000136661.8	ENSMUSG00000021792.16	Prxl2a	chr14	protein_coding	peroxiredoxin like 2A
chr14	40726160	40726846	-	40726160	40730156	A5SS	0.16	50	50	ENSMUST00000136661.8	ENSMUSG00000021792.16	Prxl2a	chr14	protein_coding	peroxiredoxin like 2A
chr14	40726160	40727598	-	40726160	40730156	A5SS	0.16	50	50	ENSMUST00000136661.8	ENSMUSG00000021792.16	Prxl2a	chr14	protein_coding	peroxiredoxin like 2A
chr14	40726160	40728755	-	40726160	40730156	A5SS	0.16	50	50	ENSMUST00000136661.8	ENSMUSG00000021792.16	Prxl2a	chr14	protein_coding	peroxiredoxin like 2A
chr14	40726160	40727598	-	40726160	40726846	5pMXE	0.16	50	50	ENSMUST00000130166.8	ENSMUSG00000021792.16	Prxl2a	chr14	protein_coding	peroxiredoxin like 2A
chr14	40726160	40728755	-	40726160	40726846	5pMXE	0.16	50	50	ENSMUST00000130166.8	ENSMUSG00000021792.16	Prxl2a	chr14	protein_coding	peroxiredoxin like 2A
chr14	40726160	40735583	-	40726160	40726846	5pMXE	0.16	50	50	ENSMUST00000130166.8	ENSMUSG00000021792.16	Prxl2a	chr14	protein_coding	peroxiredoxin like 2A
chr14	40726177	40735583	-	40726160	40735583	A3SS	0.5	50	50	ENSMUST00000143143.8	ENSMUSG00000021792.16	Prxl2a	chr14	protein_coding	peroxiredoxin like 2A
chr14	40726160	40727598	-	40726160	40735583	A5SS	0.16	50	50	ENSMUST00000143143.8	ENSMUSG00000021792.16	Prxl2a	chr14	protein_coding	peroxiredoxin like 2A
chr14	40726160	40728755	-	40726160	40735583	A5SS	0.16	50	50	ENSMUST00000143143.8	ENSMUSG00000021792.16	Prxl2a	chr14	protein_coding	peroxiredoxin like 2A
chr14	40726160;40727678	40727598;40728755	-	40726160	40728755	cassetteExon	0.5	100	100	ENSMUST00000134715.8	ENSMUSG00000021792.16	Prxl2a	chr14	protein_coding	peroxiredoxin like 2A
chr14	40809446	40813948	+	40809446;40813357	40813225;40813948	ES	0.5	50	50	ENSMUST00000022315.12	ENSMUSG00000021790.13	Dydc1	chr14	protein_coding	DPY30 domain containing 1
chr14	40827217	40827469	+	40827217	40827304	A3SS	0.5	50	50	ENSMUST00000225720.2	ENSMUSG00000037798.8	Mat1a	chr14	protein_coding	methionine adenosyltransferase I, alpha
chr14	40853789;40854205	40854173;40854392	+	40853789	40854392	cassetteExon	0.5	100	100	ENSMUST00000022314.10	ENSMUSG00000021789.15	Sftpa1	chr14	protein_coding	surfactant associated protein A1
chr14	40875708	40876458	+	40875701	40876458	A5SS	0.5	50	50	ENSMUST00000225792.2	ENSMUSG00000037780.4	Mbl1	chr14	protein_coding	mannose-binding lectin (protein A) 1
chr14	41471623	41472411	-	41471623	41472416	A5SS	0.5	50	50	ENSMUST00000224730.2	ENSMUSG00000091740.4	Gm7929	chr14	protein_coding	predicted gene 7929
chr14	41788934	41789724	-	41788934	41789729	A5SS	0.5	50	50	ENSMUST00000163566.8	ENSMUSG00000095044.8	Gm6401	chr14	protein_coding	predicted gene 6401
chr14	42589830	42590618	-	42589830	42590623	A5SS	0.5	50	50	ENSMUST00000169384.8	ENSMUSG00000095466.8	Gm3015	chr14	protein_coding	predicted gene 3015
chr14	42947241	42955510	+	42947241	42952982	3pMXE	0.5	50	50	ENSMUST00000225825.2	ENSMUSG00000114317.2	Gm49873	chr14	transcribed_processed_pseudogene	predicted gene, 49873
chr14	42959104	42966543	+	42955611	42966543	A5SS	0.5	50	50	ENSMUST00000225570.2	ENSMUSG00000114317.2	Gm49873	chr14	transcribed_processed_pseudogene	predicted gene, 49873
chr14	43026490	43032238	+	43026490	43027535	A3SS&ES	0.5	50	50	ENSMUST00000223731.2	ENSMUSG00000114619.2	Gm49141	chr14	transcribed_processed_pseudogene	predicted gene, 49141
chr14	43113659	43114686	+	43113659	43116152	A3SS	0.5	50	50	ENSMUST00000223745.2	ENSMUSG00000114544.2	Gm49146	chr14	transcribed_unprocessed_pseudogene	predicted gene, 49146
chr14	43132820	43157303	+	43132820	43146216	3pMXE	0.5	50	50	ENSMUST00000228840.2	ENSMUSG00000115483.2	Gm9732	chr14	protein_coding	predicted gene 9732
chr14	43156356	43157303	+	43132820	43157303	A5SS	0.5	50	50	ENSMUST00000228505.2	ENSMUSG00000115483.2	Gm9732	chr14	protein_coding	predicted gene 9732
chr14	44091513	44139350	+	44091513	44098233	3pMXE	0.33	50	50	ENSMUST00000227949.2	ENSMUSG00000115272.2	Gm49965	chr14	lncRNA	predicted gene, 49965
chr14	44091513	44146311	+	44091513	44098233	3pMXE	0.33	50	50	ENSMUST00000227949.2	ENSMUSG00000115272.2	Gm49965	chr14	lncRNA	predicted gene, 49965
chr14	44090826	44091392	+	44013055	44091392	A5SS	0.5	50	50	ENSMUST00000227949.2	ENSMUSG00000115272.2	Gm49965	chr14	lncRNA	predicted gene, 49965
chr14	44091513	44146311	+	44091513;44139471	44139350;44146311	ES	0.5	50	50	ENSMUST00000227370.2	ENSMUSG00000115272.2	Gm49965	chr14	lncRNA	predicted gene, 49965
chr14	44036193	44038037	-	44036193	44037011	A5SS&ES	0.5	50	50	ENSMUST00000226769.2	ENSMUSG00000115659.2	Gm41138	chr14	lncRNA	predicted gene, 41138
chr14	44037290	44038037	-	44037290	44037590	A5SS	0.5	50	50	ENSMUST00000226769.2	ENSMUSG00000115659.2	Gm41138	chr14	lncRNA	predicted gene, 41138
chr14	44036193	44038037	-	44036193;44037290	44037011;44038037	ES	0.33	50	50	ENSMUST00000226176.2	ENSMUSG00000115659.2	Gm41138	chr14	lncRNA	predicted gene, 41138
chr14	44037290;44037716	44037590;44038037	-	44037290	44038037	cassetteExon	0.5	100	100	ENSMUST00000226176.2	ENSMUSG00000115659.2	Gm41138	chr14	lncRNA	predicted gene, 41138
chr14	44037716	44038037	-	44036193	44038037	A3SS	0.33	50	50	ENSMUST00000228828.2	ENSMUSG00000115659.2	Gm41138	chr14	lncRNA	predicted gene, 41138
chr14	44056871	44112958	-	44056871	44057034	5pMXE	0.5	50	50	ENSMUST00000100691.4	ENSMUSG00000072601.5	Ear1	chr14	protein_coding	eosinophil-associated, ribonuclease A family, member 1
chr14	44112795	44112958	-	44056871	44112958	A3SS	0.5	50	50	ENSMUST00000179200.2	ENSMUSG00000072601.5	Ear1	chr14	protein_coding	eosinophil-associated, ribonuclease A family, member 1
chr14	44266611	44268772	-	44266611;44268141	44268035;44268772	ES	0.33	50	50	ENSMUST00000228214.2	ENSMUSG00000090249.10	Gm3287	chr14	lncRNA	predicted gene 3287
chr14	44271657	44274844	-	44271657	44272058	5pMXE	0.5	50	50	ENSMUST00000228214.2	ENSMUSG00000090249.10	Gm3287	chr14	lncRNA	predicted gene 3287
chr14	44263814;44265349	44265243;44265980	-	44263814	44265980	cassetteExon	0.5	100	100	ENSMUST00000228214.2	ENSMUSG00000090249.10	Gm3287	chr14	lncRNA	predicted gene 3287
chr14	44269403	44270828	-	44269403	44271467	A5SS	0.33	50	50	ENSMUST00000228214.2	ENSMUSG00000090249.10	Gm3287	chr14	lncRNA	predicted gene 3287
chr14	44269403	44271569	-	44269403	44271467	A5SS	0.33	50	50	ENSMUST00000228214.2	ENSMUSG00000090249.10	Gm3287	chr14	lncRNA	predicted gene 3287
chr14	44266068	44268772	-	44266068;44266611	44266483;44268772	ES	0.33	50	50	ENSMUST00000228893.2	ENSMUSG00000090249.10	Gm3287	chr14	lncRNA	predicted gene 3287
chr14	44269403;44270934	44270828;44271569	-	44269403	44271569	cassetteExon	0.5	100	100	ENSMUST00000228893.2	ENSMUSG00000090249.10	Gm3287	chr14	lncRNA	predicted gene 3287
chr14	44272186	44273614	-	44272186	44274253	A5SS	0.5	50	50	ENSMUST00000228893.2	ENSMUSG00000090249.10	Gm3287	chr14	lncRNA	predicted gene 3287
chr14	44268141	44268772	-	44266068	44268772	A3SS	0.33	50	50	ENSMUST00000160809.8	ENSMUSG00000090249.10	Gm3287	chr14	lncRNA	predicted gene 3287
chr14	44274443	44274844	-	44271657	44274844	A3SS	0.5	50	50	ENSMUST00000163681.3	ENSMUSG00000090249.10	Gm3287	chr14	lncRNA	predicted gene 3287
chr14	44311948	44312151	-	44311948	44312799	A5SS	0.5	50	50	ENSMUST00000228110.2	ENSMUSG00000115488.2	Gm49099	chr14	lncRNA	predicted gene, 49099
chr14	44405917	44406623	-	44401419	44406623	A3SS	0.5	50	50	ENSMUST00000100688.3	ENSMUSG00000072595.4	4930503E14Rik	chr14	protein_coding	RIKEN cDNA 4930503E14 gene
chr14	44407901	44408696	-	44407901	44408631	A5SS	0.5	50	50	ENSMUST00000100688.3	ENSMUSG00000072595.4	4930503E14Rik	chr14	protein_coding	RIKEN cDNA 4930503E14 gene
chr14	44408740	44411218	-	44410195	44411218	A3SS&ES	0.5	50	50	ENSMUST00000226475.2	ENSMUSG00000072595.4	4930503E14Rik	chr14	protein_coding	RIKEN cDNA 4930503E14 gene
chr14	44429392	44450368	-	44411320	44450368	A3SS	0.5	50	50	ENSMUST00000226164.2	ENSMUSG00000072595.4	4930503E14Rik	chr14	protein_coding	RIKEN cDNA 4930503E14 gene
chr14	44464467;44470263	44470161;44549380	-	44464467	44549380	cassetteExon	0.5	100	100	ENSMUST00000226371.2	ENSMUSG00000115536.2	Gm32857	chr14	lncRNA	predicted gene, 32857
chr14	44464467	44549380	-	44464467	44470161	5pMXE	0.5	50	50	ENSMUST00000227517.2	ENSMUSG00000115536.2	Gm32857	chr14	lncRNA	predicted gene, 32857
chr14	44526596	44526737	+	44526596	44527758	A3SS	0.5	50	50	ENSMUST00000164663.8	ENSMUSG00000091725.9	Gm8220	chr14	protein_coding	predicted gene 8220
chr14	44523197	44524191	+	44523192	44524191	A5SS	0.5	50	50	ENSMUST00000164663.8	ENSMUSG00000091725.9	Gm8220	chr14	protein_coding	predicted gene 8220
chr14	44738775	44740775	+	44730529	44740775	A5SS	0.5	50	50	ENSMUST00000227102.2	ENSMUSG00000072145.4	BC061237	chr14	protein_coding	cDNA sequence BC061237
chr14	44799401	44865051	-	44799401	44800130	5pMXE	0.5	50	50	ENSMUST00000165769.8	ENSMUSG00000092165.10	Gm5624	chr14	protein_coding	predicted gene 5624
chr14	44795367	44797297	-	44795367	44797290	A5SS	0.5	50	50	ENSMUST00000165769.8	ENSMUSG00000092165.10	Gm5624	chr14	protein_coding	predicted gene 5624
chr14	44799401	44865051	-	44799401;44800260	44800130;44865051	ES	0.33	50	50	ENSMUST00000228629.2	ENSMUSG00000092165.10	Gm5624	chr14	protein_coding	predicted gene 5624
chr14	44825110	44865051	-	44800260	44865051	A3SS	0.33	50	50	ENSMUST00000228629.2	ENSMUSG00000092165.10	Gm5624	chr14	protein_coding	predicted gene 5624
chr14	44825110	44865051	-	44799401	44865051	A3SS	0.33	50	50	ENSMUST00000227882.2	ENSMUSG00000092165.10	Gm5624	chr14	protein_coding	predicted gene 5624
chr14	44823948	44824481	+	44823948	44825090	A3SS	0.5	50	50	ENSMUST00000170094.8	ENSMUSG00000091122.9	Gm8247	chr14	protein_coding	predicted gene 8247
chr14	44853738	44854436	+	44853738	44854393	A3SS	0.5	50	50	ENSMUST00000228692.2	ENSMUSG00000091605.3	Gm8256	chr14	transcribed_unprocessed_pseudogene	predicted gene 8256
chr14	44893932	44943580	-	44893932	44894659	5pMXE	0.5	50	50	ENSMUST00000169583.8	ENSMUSG00000079265.11	Gm8257	chr14	protein_coding	predicted pseudogene 8257
chr14	44928485	44943580	-	44893932	44943580	A3SS	0.5	50	50	ENSMUST00000111860.9	ENSMUSG00000079265.11	Gm8257	chr14	protein_coding	predicted pseudogene 8257
chr14	44955412	44960319	-	44955412;44959637	44959456;44960319	ES	0.5	50	50	ENSMUST00000165003.8	ENSMUSG00000091923.9	Gm8267	chr14	protein_coding	predicted gene 8267
chr14	44961561	44962252	-	44961561	44962289	A5SS	0.5	50	50	ENSMUST00000165003.8	ENSMUSG00000091923.9	Gm8267	chr14	protein_coding	predicted gene 8267
chr14	45059716	45065416	+	45059716	45060174	A3SS&ES	0.5	50	50	ENSMUST00000227858.2	ENSMUSG00000115747.2	Gm49145	chr14	lncRNA	predicted gene, 49145
chr14	45147687	45194968	+	45147687;45188944	45188841;45194968	ES	0.2	50	50	ENSMUST00000099718.10	ENSMUSG00000085500.10	Gm16976	chr14	transcribed_unprocessed_pseudogene	predicted gene, 16976
chr14	45096678	45147590	+	45096907	45147590	A5SS	0.5	50	50	ENSMUST00000099718.10	ENSMUSG00000085500.10	Gm16976	chr14	transcribed_unprocessed_pseudogene	predicted gene, 16976
chr14	45182680	45188841	+	45147687	45188841	A5SS	0.33	50	50	ENSMUST00000099718.10	ENSMUSG00000085500.10	Gm16976	chr14	transcribed_unprocessed_pseudogene	predicted gene, 16976
chr14	45182680	45194968	+	45188944	45194968	A5SS&ES	0.2	50	50	ENSMUST00000099718.10	ENSMUSG00000085500.10	Gm16976	chr14	transcribed_unprocessed_pseudogene	predicted gene, 16976
chr14	45187697	45188841	+	45147687	45188841	A5SS	0.33	50	50	ENSMUST00000099718.10	ENSMUSG00000085500.10	Gm16976	chr14	transcribed_unprocessed_pseudogene	predicted gene, 16976
chr14	45194441	45194968	+	45188944	45194968	A5SS	0.2	50	50	ENSMUST00000099718.10	ENSMUSG00000085500.10	Gm16976	chr14	transcribed_unprocessed_pseudogene	predicted gene, 16976
chr14	45194618	45194968	+	45188944	45194968	A5SS	0.2	50	50	ENSMUST00000099718.10	ENSMUSG00000085500.10	Gm16976	chr14	transcribed_unprocessed_pseudogene	predicted gene, 16976
chr14	45147687	45188841	+	45147687	45211482	A3SS	0.33	50	50	ENSMUST00000127408.2	ENSMUSG00000085500.10	Gm16976	chr14	transcribed_unprocessed_pseudogene	predicted gene, 16976
chr14	45147687	45194968	+	45147687	45211482	A3SS	0.33	50	50	ENSMUST00000127408.2	ENSMUSG00000085500.10	Gm16976	chr14	transcribed_unprocessed_pseudogene	predicted gene, 16976
chr14	45182680	45194968	+	45147687	45194968	A5SS	0.2	50	50	ENSMUST00000227507.2	ENSMUSG00000085500.10	Gm16976	chr14	transcribed_unprocessed_pseudogene	predicted gene, 16976
chr14	45194441	45194968	+	45147687	45194968	A5SS	0.2	50	50	ENSMUST00000227507.2	ENSMUSG00000085500.10	Gm16976	chr14	transcribed_unprocessed_pseudogene	predicted gene, 16976
chr14	45194618	45194968	+	45147687	45194968	A5SS	0.2	50	50	ENSMUST00000227507.2	ENSMUSG00000085500.10	Gm16976	chr14	transcribed_unprocessed_pseudogene	predicted gene, 16976
chr14	45182680	45194968	+	45182680;45188944	45187500;45194968	ES	0.25	50	50	ENSMUST00000228178.2	ENSMUSG00000085500.10	Gm16976	chr14	transcribed_unprocessed_pseudogene	predicted gene, 16976
chr14	45182680	45188841	+	45182680	45187500	A3SS	0.33	50	50	ENSMUST00000228178.2	ENSMUSG00000085500.10	Gm16976	chr14	transcribed_unprocessed_pseudogene	predicted gene, 16976
chr14	45182680	45194968	+	45182680;45188944	45188841;45194968	ES	0.25	50	50	ENSMUST00000228573.2	ENSMUSG00000085500.10	Gm16976	chr14	transcribed_unprocessed_pseudogene	predicted gene, 16976
chr14	45182680;45187697	45187500;45188841	+	45182680	45188841	cassetteExon	0.5	100	100	ENSMUST00000228573.2	ENSMUSG00000085500.10	Gm16976	chr14	transcribed_unprocessed_pseudogene	predicted gene, 16976
chr14	45182680	45187500	+	45182680	45194968	A3SS	0.33	50	50	ENSMUST00000228852.2	ENSMUSG00000085500.10	Gm16976	chr14	transcribed_unprocessed_pseudogene	predicted gene, 16976
chr14	45194441	45194968	+	45182680	45194968	A5SS	0.2	50	50	ENSMUST00000228852.2	ENSMUSG00000085500.10	Gm16976	chr14	transcribed_unprocessed_pseudogene	predicted gene, 16976
chr14	45194618	45194968	+	45182680	45194968	A5SS	0.2	50	50	ENSMUST00000228852.2	ENSMUSG00000085500.10	Gm16976	chr14	transcribed_unprocessed_pseudogene	predicted gene, 16976
chr14	45194441	45194968	+	45194618	45194968	A5SS	0.2	50	50	ENSMUST00000228641.2	ENSMUSG00000085500.10	Gm16976	chr14	transcribed_unprocessed_pseudogene	predicted gene, 16976
chr14	45197888	45216544	-	45197888	45198735	5pMXE	0.25	50	50	ENSMUST00000228169.2	ENSMUSG00000075042.11	4930431P03Rik	chr14	lncRNA	RIKEN cDNA 4930431P03 gene
chr14	45197888	45217364	-	45197888	45198735	5pMXE	0.25	50	50	ENSMUST00000228169.2	ENSMUSG00000075042.11	4930431P03Rik	chr14	lncRNA	RIKEN cDNA 4930431P03 gene
chr14	45197964	45198735	-	45197888	45198735	A3SS	0.5	50	50	ENSMUST00000228169.2	ENSMUSG00000075042.11	4930431P03Rik	chr14	lncRNA	RIKEN cDNA 4930431P03 gene
chr14	45195252	45196399	-	45195252	45196795	A5SS	0.5	50	50	ENSMUST00000228169.2	ENSMUSG00000075042.11	4930431P03Rik	chr14	lncRNA	RIKEN cDNA 4930431P03 gene
chr14	45197888	45198569	-	45197888	45198735	A5SS	0.25	50	50	ENSMUST00000228169.2	ENSMUSG00000075042.11	4930431P03Rik	chr14	lncRNA	RIKEN cDNA 4930431P03 gene
chr14	45197964	45198370	-	45197964	45198735	A5SS	0.5	50	50	ENSMUST00000166127.8	ENSMUSG00000075042.11	4930431P03Rik	chr14	lncRNA	RIKEN cDNA 4930431P03 gene
chr14	45197888	45216544	-	45197888	45198569	5pMXE	0.25	50	50	ENSMUST00000228859.2	ENSMUSG00000075042.11	4930431P03Rik	chr14	lncRNA	RIKEN cDNA 4930431P03 gene
chr14	45197888	45217364	-	45197888	45198569	5pMXE	0.25	50	50	ENSMUST00000228859.2	ENSMUSG00000075042.11	4930431P03Rik	chr14	lncRNA	RIKEN cDNA 4930431P03 gene
chr14	45197888	45217364	-	45197888;45216698	45216544;45217364	ES	0.33	50	50	ENSMUST00000227028.2	ENSMUSG00000115344.2	Gm49364	chr14	lncRNA	predicted gene, 49364
chr14	45217429	45244028	-	45217429	45227013	5pMXE	0.5	50	50	ENSMUST00000227028.2	ENSMUSG00000115344.2	Gm49364	chr14	lncRNA	predicted gene, 49364
chr14	45213868	45216544	-	45197888	45216544	A3SS	0.5	50	50	ENSMUST00000227028.2	ENSMUSG00000115344.2	Gm49364	chr14	lncRNA	predicted gene, 49364
chr14	45213868	45217364	-	45216698	45217364	A3SS&ES	0.33	50	50	ENSMUST00000227028.2	ENSMUSG00000115344.2	Gm49364	chr14	lncRNA	predicted gene, 49364
chr14	45213868	45217364	-	45197888	45217364	A3SS	0.33	50	50	ENSMUST00000226133.2	ENSMUSG00000115344.2	Gm49364	chr14	lncRNA	predicted gene, 49364
chr14	45213868	45217364	-	45213868;45216698	45216544;45217364	ES	0.5	50	50	ENSMUST00000168000.2	ENSMUSG00000090709.3	Gm17173	chr14	lncRNA	predicted gene 17173
chr14	45197888	45217364	-	45216698	45217364	3pMXE	0.33	50	50	ENSMUST00000228945.2	ENSMUSG00000090709.3	Gm17173	chr14	lncRNA	predicted gene 17173
chr14	45450981;45455499	45455228;45456453	-	45450981	45456453	cassetteExon	0.5	100	100	ENSMUST00000139526.9	ENSMUSG00000021830.15	Txndc16	chr14	protein_coding	thioredoxin domain containing 16
chr14	45450981;45456420	45456360;45456674	-	45450981;45456506	45456453;45456674	MXE	0.5	100	100	ENSMUST00000139526.9	ENSMUSG00000021830.15	Txndc16	chr14	protein_coding	thioredoxin domain containing 16
chr14	45373427	45377875	-	45373430	45377875	A3SS	0.5	50	50	ENSMUST00000139526.9	ENSMUSG00000021830.15	Txndc16	chr14	protein_coding	thioredoxin domain containing 16
chr14	45420174	45420503	-	45410061	45420503	A3SS	0.5	50	50	ENSMUST00000139526.9	ENSMUSG00000021830.15	Txndc16	chr14	protein_coding	thioredoxin domain containing 16
chr14	45456506	45456804	-	45456506	45456674	A5SS	0.5	50	50	ENSMUST00000139526.9	ENSMUSG00000021830.15	Txndc16	chr14	protein_coding	thioredoxin domain containing 16
chr14	45450981;45456420	45456360;45456674	-	45450981;45456506	45455228;45456674	MXE	0.5	100	100	ENSMUST00000123879.8	ENSMUSG00000021830.15	Txndc16	chr14	protein_coding	thioredoxin domain containing 16
chr14	45450981	45456360	-	45450981	45456453	A5SS	0.33	50	50	ENSMUST00000147853.8	ENSMUSG00000021830.15	Txndc16	chr14	protein_coding	thioredoxin domain containing 16
chr14	45450981	45455228	-	45450981	45456360	A5SS	0.33	50	50	ENSMUST00000143609.2	ENSMUSG00000021830.15	Txndc16	chr14	protein_coding	thioredoxin domain containing 16
chr14	45450981	45456453	-	45455499	45456453	3pMXE	0.5	50	50	ENSMUST00000123118.2	ENSMUSG00000021830.15	Txndc16	chr14	protein_coding	thioredoxin domain containing 16
chr14	45456420	45456674	-	45456506	45456674	A3SS&ES	0.5	50	50	ENSMUST00000123118.2	ENSMUSG00000021830.15	Txndc16	chr14	protein_coding	thioredoxin domain containing 16
chr14	45457875	45481612	+	45457875	45460685	3pMXE	0.2	50	50	ENSMUST00000147957.2	ENSMUSG00000049092.12	Gpr137c	chr14	protein_coding	G protein-coupled receptor 137C
chr14	45457875;45460414	45460353;45460685	+	45457875	45460685	cassetteExon	0.5	100	100	ENSMUST00000147957.2	ENSMUSG00000049092.12	Gpr137c	chr14	protein_coding	G protein-coupled receptor 137C
chr14	45457875	45458023	+	45457875	45460685	A3SS	0.2	50	50	ENSMUST00000147957.2	ENSMUSG00000049092.12	Gpr137c	chr14	protein_coding	G protein-coupled receptor 137C
chr14	45457875	45458128	+	45457875	45460685	A3SS	0.2	50	50	ENSMUST00000147957.2	ENSMUSG00000049092.12	Gpr137c	chr14	protein_coding	G protein-coupled receptor 137C
chr14	45457875	45458023	+	45457875	45460353	A3SS	0.25	50	50	ENSMUST00000227009.2	ENSMUSG00000049092.12	Gpr137c	chr14	protein_coding	G protein-coupled receptor 137C
chr14	45457875	45458128	+	45457875	45460353	A3SS	0.25	50	50	ENSMUST00000227009.2	ENSMUSG00000049092.12	Gpr137c	chr14	protein_coding	G protein-coupled receptor 137C
chr14	45457875	45458023	+	45457875	45481612	A3SS	0.2	50	50	ENSMUST00000146150.3	ENSMUSG00000049092.12	Gpr137c	chr14	protein_coding	G protein-coupled receptor 137C
chr14	45457875	45458128	+	45457875	45481612	A3SS	0.2	50	50	ENSMUST00000146150.3	ENSMUSG00000049092.12	Gpr137c	chr14	protein_coding	G protein-coupled receptor 137C
chr14	45457875	45460353	+	45457875	45481612	A3SS	0.2	50	50	ENSMUST00000146150.3	ENSMUSG00000049092.12	Gpr137c	chr14	protein_coding	G protein-coupled receptor 137C
chr14	45502867	45514842	+	45483973	45514842	A5SS	0.5	50	50	ENSMUST00000146150.3	ENSMUSG00000049092.12	Gpr137c	chr14	protein_coding	G protein-coupled receptor 137C
chr14	45457875	45458128	+	45457875	45458023	A3SS	0.2	50	50	ENSMUST00000227056.2	ENSMUSG00000049092.12	Gpr137c	chr14	protein_coding	G protein-coupled receptor 137C
chr14	45539379	45542706	-	45539379;45541044	45541006;45542706	ES	0.5	50	50	ENSMUST00000022378.9	ENSMUSG00000021831.10	Ero1a	chr14	protein_coding	endoplasmic reticulum oxidoreductase 1 alpha
chr14	45544088	45556160	-	45544088	45555834	5pMXE	0.33	50	50	ENSMUST00000022378.9	ENSMUSG00000021831.10	Ero1a	chr14	protein_coding	endoplasmic reticulum oxidoreductase 1 alpha
chr14	45531897	45536503	-	45533440	45536503	A3SS&ES	0.5	50	50	ENSMUST00000022378.9	ENSMUSG00000021831.10	Ero1a	chr14	protein_coding	endoplasmic reticulum oxidoreductase 1 alpha
chr14	45544088	45544349	-	45544088	45555834	A5SS	0.33	50	50	ENSMUST00000022378.9	ENSMUSG00000021831.10	Ero1a	chr14	protein_coding	endoplasmic reticulum oxidoreductase 1 alpha
chr14	45544088	45544349	-	45544088	45556160	A5SS	0.33	50	50	ENSMUST00000227315.2	ENSMUSG00000021831.10	Ero1a	chr14	protein_coding	endoplasmic reticulum oxidoreductase 1 alpha
chr14	45567389;45567978	45567823;45568287	+	45567389	45568287	cassetteExon	0.5	100	100	ENSMUST00000022380.9	ENSMUSG00000021832.9	Psmc6	chr14	protein_coding	proteasome (prosome, macropain) 26S subunit, ATPase, 6
chr14	45567560	45568287	+	45567389	45568287	A5SS	0.25	50	50	ENSMUST00000022380.9	ENSMUSG00000021832.9	Psmc6	chr14	protein_coding	proteasome (prosome, macropain) 26S subunit, ATPase, 6
chr14	45567640	45568287	+	45567389	45568287	A5SS	0.25	50	50	ENSMUST00000022380.9	ENSMUSG00000021832.9	Psmc6	chr14	protein_coding	proteasome (prosome, macropain) 26S subunit, ATPase, 6
chr14	45567560	45568287	+	45567640	45568287	A5SS	0.25	50	50	ENSMUST00000227148.2	ENSMUSG00000021832.9	Psmc6	chr14	protein_coding	proteasome (prosome, macropain) 26S subunit, ATPase, 6
chr14	45567978	45568287	+	45567640	45568287	A5SS	0.25	50	50	ENSMUST00000227148.2	ENSMUSG00000021832.9	Psmc6	chr14	protein_coding	proteasome (prosome, macropain) 26S subunit, ATPase, 6
chr14	45567560;45567978	45567823;45568287	+	45567560	45568287	cassetteExon	0.5	100	100	ENSMUST00000228026.2	ENSMUSG00000021832.9	Psmc6	chr14	protein_coding	proteasome (prosome, macropain) 26S subunit, ATPase, 6
chr14	45567389	45567823	+	45567560	45567823	A5SS	0.5	50	50	ENSMUST00000226431.2	ENSMUSG00000021832.9	Psmc6	chr14	protein_coding	proteasome (prosome, macropain) 26S subunit, ATPase, 6
chr14	45567389	45568287	+	45567978	45568287	A5SS&ES	0.25	50	50	ENSMUST00000226431.2	ENSMUSG00000021832.9	Psmc6	chr14	protein_coding	proteasome (prosome, macropain) 26S subunit, ATPase, 6
chr14	45567560	45568287	+	45567978	45568287	A5SS&ES	0.25	50	50	ENSMUST00000228479.2	ENSMUSG00000021832.9	Psmc6	chr14	protein_coding	proteasome (prosome, macropain) 26S subunit, ATPase, 6
chr14	45592435	45596716	+	45592435;45594223	45594170;45596716	ES	0.33	50	50	ENSMUST00000226873.2	ENSMUSG00000053205.10	Styx	chr14	protein_coding	serine/threonine/tyrosine interaction protein
chr14	45594223	45604056	+	45594223;45596813	45596716;45604056	ES	0.5	50	50	ENSMUST00000226873.2	ENSMUSG00000053205.10	Styx	chr14	protein_coding	serine/threonine/tyrosine interaction protein
chr14	45594223;45595764	45595674;45596716	+	45594223	45596716	cassetteExon	0.5	100	100	ENSMUST00000226873.2	ENSMUSG00000053205.10	Styx	chr14	protein_coding	serine/threonine/tyrosine interaction protein
chr14	45608548;45608861	45608726;45609842	+	45608548	45609842	cassetteExon	0.5	100	100	ENSMUST00000226873.2	ENSMUSG00000053205.10	Styx	chr14	protein_coding	serine/threonine/tyrosine interaction protein
chr14	45592435;45596813	45596716;45604056	+	45592435;45594223	45594170;45604056	MXE	0.5	100	100	ENSMUST00000226785.2	ENSMUSG00000053205.10	Styx	chr14	protein_coding	serine/threonine/tyrosine interaction protein
chr14	45594223	45595674	+	45594223	45604056	A3SS	0.33	50	50	ENSMUST00000226785.2	ENSMUSG00000053205.10	Styx	chr14	protein_coding	serine/threonine/tyrosine interaction protein
chr14	45595764	45596716	+	45592435	45596716	A5SS	0.33	50	50	ENSMUST00000228818.2	ENSMUSG00000053205.10	Styx	chr14	protein_coding	serine/threonine/tyrosine interaction protein
chr14	45622205	45626508	-	45622205	45626205	5pMXE	0.16	50	50	ENSMUST00000046191.9	ENSMUSG00000037722.9	Gnpnat1	chr14	protein_coding	glucosamine-phosphate N-acetyltransferase 1
chr14	45622205	45626521	-	45622205	45626205	5pMXE	0.16	50	50	ENSMUST00000046191.9	ENSMUSG00000037722.9	Gnpnat1	chr14	protein_coding	glucosamine-phosphate N-acetyltransferase 1
chr14	45619140;45619535	45619470;45620851	-	45619140	45620851	cassetteExon	0.5	100	100	ENSMUST00000046191.9	ENSMUSG00000037722.9	Gnpnat1	chr14	protein_coding	glucosamine-phosphate N-acetyltransferase 1
chr14	45618473	45619013	-	45618455	45619013	A3SS	0.5	50	50	ENSMUST00000046191.9	ENSMUSG00000037722.9	Gnpnat1	chr14	protein_coding	glucosamine-phosphate N-acetyltransferase 1
chr14	45622205	45625730	-	45622205	45626205	A5SS	0.16	50	50	ENSMUST00000046191.9	ENSMUSG00000037722.9	Gnpnat1	chr14	protein_coding	glucosamine-phosphate N-acetyltransferase 1
chr14	45622205	45625905	-	45622205	45626205	A5SS	0.16	50	50	ENSMUST00000046191.9	ENSMUSG00000037722.9	Gnpnat1	chr14	protein_coding	glucosamine-phosphate N-acetyltransferase 1
chr14	45622205	45625919	-	45622205	45626205	A5SS	0.16	50	50	ENSMUST00000046191.9	ENSMUSG00000037722.9	Gnpnat1	chr14	protein_coding	glucosamine-phosphate N-acetyltransferase 1
chr14	45622205	45626508	-	45622205	45625905	5pMXE	0.16	50	50	ENSMUST00000227865.2	ENSMUSG00000037722.9	Gnpnat1	chr14	protein_coding	glucosamine-phosphate N-acetyltransferase 1
chr14	45622205	45626521	-	45622205	45625905	5pMXE	0.16	50	50	ENSMUST00000227865.2	ENSMUSG00000037722.9	Gnpnat1	chr14	protein_coding	glucosamine-phosphate N-acetyltransferase 1
chr14	45622205	45625730	-	45622205	45625905	A5SS	0.16	50	50	ENSMUST00000227865.2	ENSMUSG00000037722.9	Gnpnat1	chr14	protein_coding	glucosamine-phosphate N-acetyltransferase 1
chr14	45622205	45625919	-	45622205	45625905	A5SS	0.16	50	50	ENSMUST00000227865.2	ENSMUSG00000037722.9	Gnpnat1	chr14	protein_coding	glucosamine-phosphate N-acetyltransferase 1
chr14	45622205	45626508	-	45622205	45625919	5pMXE	0.16	50	50	ENSMUST00000226856.2	ENSMUSG00000037722.9	Gnpnat1	chr14	protein_coding	glucosamine-phosphate N-acetyltransferase 1
chr14	45622205	45626521	-	45622205	45625919	5pMXE	0.16	50	50	ENSMUST00000226856.2	ENSMUSG00000037722.9	Gnpnat1	chr14	protein_coding	glucosamine-phosphate N-acetyltransferase 1
chr14	45622205	45625730	-	45622205	45625919	A5SS	0.16	50	50	ENSMUST00000226856.2	ENSMUSG00000037722.9	Gnpnat1	chr14	protein_coding	glucosamine-phosphate N-acetyltransferase 1
chr14	45622205	45625730	-	45622205	45626521	A5SS	0.16	50	50	ENSMUST00000228304.2	ENSMUSG00000037722.9	Gnpnat1	chr14	protein_coding	glucosamine-phosphate N-acetyltransferase 1
chr14	45622205	45626508	-	45622205	45626521	A5SS	0.16	50	50	ENSMUST00000228304.2	ENSMUSG00000037722.9	Gnpnat1	chr14	protein_coding	glucosamine-phosphate N-acetyltransferase 1
chr14	45622205	45625730	-	45622205	45626508	A5SS	0.16	50	50	ENSMUST00000228003.2	ENSMUSG00000037722.9	Gnpnat1	chr14	protein_coding	glucosamine-phosphate N-acetyltransferase 1
chr14	45680896	45682267	-	45680896	45684337	A5SS	0.5	50	50	ENSMUST00000227172.2	ENSMUSG00000115209.2	Gm34250	chr14	lncRNA	predicted gene, 34250
chr14	45713570;45713907	45713875;45719889	-	45713570	45719889	cassetteExon	0.5	100	100	ENSMUST00000045905.15	ENSMUSG00000037712.18	Fermt2	chr14	protein_coding	fermitin family member 2
chr14	45713570	45715097	-	45713570	45719889	A5SS	0.33	50	50	ENSMUST00000045905.15	ENSMUSG00000037712.18	Fermt2	chr14	protein_coding	fermitin family member 2
chr14	45742187	45756353	-	45742187	45766882	A5SS	0.5	50	50	ENSMUST00000045905.15	ENSMUSG00000037712.18	Fermt2	chr14	protein_coding	fermitin family member 2
chr14	45713570	45713875	-	45713570	45715097	A5SS	0.33	50	50	ENSMUST00000141424.2	ENSMUSG00000037712.18	Fermt2	chr14	protein_coding	fermitin family member 2
chr14	45781814	45783386	+	45781814	45782206	3pMXE	0.5	50	50	ENSMUST00000228591.2	ENSMUSG00000115324.2	4930527F14Rik	chr14	lncRNA	RIKEN cDNA 4930527F14 gene
chr14	45783429	45795795	+	45783429	45799064	A3SS	0.5	50	50	ENSMUST00000226815.2	ENSMUSG00000115324.2	4930527F14Rik	chr14	lncRNA	RIKEN cDNA 4930527F14 gene
chr14	45797047	45799064	+	45783429	45799064	A5SS	0.5	50	50	ENSMUST00000226815.2	ENSMUSG00000115324.2	4930527F14Rik	chr14	lncRNA	RIKEN cDNA 4930527F14 gene
chr14	45825663	45826150	+	45801580	45826150	A5SS	0.5	50	50	ENSMUST00000226558.2	ENSMUSG00000085913.3	Gm15601	chr14	lncRNA	predicted gene 15601
chr14	45833121	45839022	-	45833121;45836642	45836559;45839022	ES	0.5	50	50	ENSMUST00000111828.4	ENSMUSG00000037697.20	Ddhd1	chr14	protein_coding	DDHD domain containing 1
chr14	45858297;45860399	45860298;45867037	-	45858297	45867037	cassetteExon	0.5	100	100	ENSMUST00000111828.4	ENSMUSG00000037697.20	Ddhd1	chr14	protein_coding	DDHD domain containing 1
chr14	45848147	45851620	-	45848211	45851620	A3SS	0.5	50	50	ENSMUST00000111828.4	ENSMUSG00000037697.20	Ddhd1	chr14	protein_coding	DDHD domain containing 1
chr14	45866331	45867037	-	45858297	45867037	A3SS	0.33	50	50	ENSMUST00000111828.4	ENSMUSG00000037697.20	Ddhd1	chr14	protein_coding	DDHD domain containing 1
chr14	45867207	45894679	-	45867210	45894679	A3SS	0.5	50	50	ENSMUST00000111828.4	ENSMUSG00000037697.20	Ddhd1	chr14	protein_coding	DDHD domain containing 1
chr14	45860399;45866331	45866311;45867037	-	45860399	45867037	cassetteExon	0.5	100	100	ENSMUST00000087320.13	ENSMUSG00000037697.20	Ddhd1	chr14	protein_coding	DDHD domain containing 1
chr14	45860399	45861806	-	45860399	45867037	A5SS	0.33	50	50	ENSMUST00000087320.13	ENSMUSG00000037697.20	Ddhd1	chr14	protein_coding	DDHD domain containing 1
chr14	45858297	45867037	-	45858297	45860298	5pMXE	0.5	50	50	ENSMUST00000129599.8	ENSMUSG00000037697.20	Ddhd1	chr14	protein_coding	DDHD domain containing 1
chr14	45860399	45866311	-	45860350	45866311	A3SS	0.33	50	50	ENSMUST00000149286.9	ENSMUSG00000037697.20	Ddhd1	chr14	protein_coding	DDHD domain containing 1
chr14	45860399	45867037	-	45866331	45867037	A3SS&ES	0.33	50	50	ENSMUST00000149286.9	ENSMUSG00000037697.20	Ddhd1	chr14	protein_coding	DDHD domain containing 1
chr14	45861837	45866311	-	45860350	45866311	A3SS	0.33	50	50	ENSMUST00000149286.9	ENSMUSG00000037697.20	Ddhd1	chr14	protein_coding	DDHD domain containing 1
chr14	45860399;45861837	45861806;45866311	-	45860399	45866311	cassetteExon	0.5	100	100	ENSMUST00000226301.2	ENSMUSG00000037697.20	Ddhd1	chr14	protein_coding	DDHD domain containing 1
chr14	46617098	46617736	+	46617098	46620757	A3SS	0.5	50	50	ENSMUST00000141358.2	ENSMUSG00000079261.3	Gm15217	chr14	protein_coding	predicted gene 15217
chr14	46620674	46620757	+	46617098	46620757	A5SS	0.5	50	50	ENSMUST00000141358.2	ENSMUSG00000079261.3	Gm15217	chr14	protein_coding	predicted gene 15217
chr14	46618658	46620534	+	46617843	46620534	A5SS	0.5	50	50	ENSMUST00000111826.3	ENSMUSG00000079261.3	Gm15217	chr14	protein_coding	predicted gene 15217
chr14	46623551	46627761	-	46623551;46624737	46624613;46627761	ES	0.5	50	50	ENSMUST00000074077.12	ENSMUSG00000021835.16	Bmp4	chr14	protein_coding	bone morphogenetic protein 4
chr14	46623551	46627761	-	46623551	46624613	5pMXE	0.5	50	50	ENSMUST00000226759.2	ENSMUSG00000021835.16	Bmp4	chr14	protein_coding	bone morphogenetic protein 4
chr14	46623551	46627761	-	46624737	46627761	3pMXE	0.5	50	50	ENSMUST00000135408.2	ENSMUSG00000021835.16	Bmp4	chr14	protein_coding	bone morphogenetic protein 4
chr14	46835824	46863703	-	46835824	46848086	5pMXE	0.5	50	50	ENSMUST00000228533.2	ENSMUSG00000115781.2	Gm49319	chr14	lncRNA	predicted gene, 49319
chr14	46808706	46835700	-	46766297	46835700	A3SS	0.25	50	50	ENSMUST00000228533.2	ENSMUSG00000115781.2	Gm49319	chr14	lncRNA	predicted gene, 49319
chr14	46824166	46835700	-	46766297	46835700	A3SS	0.25	50	50	ENSMUST00000228533.2	ENSMUSG00000115781.2	Gm49319	chr14	lncRNA	predicted gene, 49319
chr14	46827888	46835700	-	46766297	46835700	A3SS	0.25	50	50	ENSMUST00000228533.2	ENSMUSG00000115781.2	Gm49319	chr14	lncRNA	predicted gene, 49319
chr14	46766297	46806070	-	46766297	46835700	A5SS	0.5	50	50	ENSMUST00000228533.2	ENSMUSG00000115781.2	Gm49319	chr14	lncRNA	predicted gene, 49319
chr14	46863761	46871481	-	46863761;46865152	46864938;46871481	ES	0.33	50	50	ENSMUST00000228663.2	ENSMUSG00000115781.2	Gm49319	chr14	lncRNA	predicted gene, 49319
chr14	46824166;46827888	46827615;46835700	-	46824166	46835700	cassetteExon	0.5	100	100	ENSMUST00000228663.2	ENSMUSG00000115781.2	Gm49319	chr14	lncRNA	predicted gene, 49319
chr14	46842700	46863703	-	46835824	46863703	A3SS	0.5	50	50	ENSMUST00000228663.2	ENSMUSG00000115781.2	Gm49319	chr14	lncRNA	predicted gene, 49319
chr14	46870602	46871481	-	46865152	46871481	A3SS	0.33	50	50	ENSMUST00000228663.2	ENSMUSG00000115781.2	Gm49319	chr14	lncRNA	predicted gene, 49319
chr14	46807222	46807664	-	46807222	46807660	A5SS	0.5	50	50	ENSMUST00000228663.2	ENSMUSG00000115781.2	Gm49319	chr14	lncRNA	predicted gene, 49319
chr14	46808706	46813136	-	46808706	46817457	A5SS	0.33	50	50	ENSMUST00000228663.2	ENSMUSG00000115781.2	Gm49319	chr14	lncRNA	predicted gene, 49319
chr14	46824166	46825015	-	46824166	46835700	A5SS	0.33	50	50	ENSMUST00000228663.2	ENSMUSG00000115781.2	Gm49319	chr14	lncRNA	predicted gene, 49319
chr14	46871652	46871858	-	46871652	46874755	A5SS	0.5	50	50	ENSMUST00000228663.2	ENSMUSG00000115781.2	Gm49319	chr14	lncRNA	predicted gene, 49319
chr14	46870602	46871481	-	46863761	46871481	A3SS	0.33	50	50	ENSMUST00000228523.2	ENSMUSG00000115781.2	Gm49319	chr14	lncRNA	predicted gene, 49319
chr14	46824166	46825015	-	46824166	46827615	A5SS	0.33	50	50	ENSMUST00000228523.2	ENSMUSG00000115781.2	Gm49319	chr14	lncRNA	predicted gene, 49319
chr14	46824166	46835700	-	46808706	46835700	A3SS	0.33	50	50	ENSMUST00000226162.2	ENSMUSG00000085123.3	Rubie	chr14	lncRNA	RNA upstream of Bmp4 expressed in inner ear
chr14	46827888	46835700	-	46808706	46835700	A3SS	0.33	50	50	ENSMUST00000226162.2	ENSMUSG00000085123.3	Rubie	chr14	lncRNA	RNA upstream of Bmp4 expressed in inner ear
chr14	46808706	46813136	-	46808706	46835700	A5SS	0.33	50	50	ENSMUST00000226162.2	ENSMUSG00000085123.3	Rubie	chr14	lncRNA	RNA upstream of Bmp4 expressed in inner ear
chr14	46808706	46817457	-	46808706	46835700	A5SS	0.33	50	50	ENSMUST00000226162.2	ENSMUSG00000085123.3	Rubie	chr14	lncRNA	RNA upstream of Bmp4 expressed in inner ear
chr14	46998105	47001981	+	46998105;47000067	46999985;47001981	ES	0.5	50	50	ENSMUST00000067426.6	ENSMUSG00000037628.11	Cdkn3	chr14	protein_coding	cyclin-dependent kinase inhibitor 3
chr14	47006354	47007290	+	47006354	47007293	A3SS	0.5	50	50	ENSMUST00000067426.6	ENSMUSG00000037628.11	Cdkn3	chr14	protein_coding	cyclin-dependent kinase inhibitor 3
chr14	47005168	47006323	+	47004855	47006323	A5SS	0.5	50	50	ENSMUST00000067426.6	ENSMUSG00000037628.11	Cdkn3	chr14	protein_coding	cyclin-dependent kinase inhibitor 3
chr14	47017682;47021330	47021283;47021569	-	47017682	47021569	cassetteExon	0.5	100	100	ENSMUST00000015903.12	ENSMUSG00000015759.12	Cnih1	chr14	protein_coding	cornichon family AMPA receptor auxiliary protein 1
chr14	47053684	47059558	-	47053684;47054939	47054843;47059558	ES	0.33	50	50	ENSMUST00000111817.8	ENSMUSG00000062014.14	Gmfb	chr14	protein_coding	glia maturation factor, beta
chr14	47054939	47055873	-	47054939	47059558	A5SS	0.5	50	50	ENSMUST00000111817.8	ENSMUSG00000062014.14	Gmfb	chr14	protein_coding	glia maturation factor, beta
chr14	47053684	47059558	-	47051774	47059558	A3SS	0.33	50	50	ENSMUST00000228065.2	ENSMUSG00000062014.14	Gmfb	chr14	protein_coding	glia maturation factor, beta
chr14	47054939	47059558	-	47051774	47059558	A3SS	0.33	50	50	ENSMUST00000228065.2	ENSMUSG00000062014.14	Gmfb	chr14	protein_coding	glia maturation factor, beta
chr14	47051774	47052362	-	47051774	47059558	A5SS	0.5	50	50	ENSMUST00000228065.2	ENSMUSG00000062014.14	Gmfb	chr14	protein_coding	glia maturation factor, beta
chr14	47077753	47079878	+	47077753	47083331	A3SS	0.5	50	50	ENSMUST00000068532.10	ENSMUSG00000055128.16	Cgrrf1	chr14	protein_coding	cell growth regulator with ring finger domain 1
chr14	47118628	47119197	-	47104612	47119197	A3SS	0.5	50	50	ENSMUST00000228370.2	ENSMUSG00000115100.2	Gm34934	chr14	lncRNA	predicted gene, 34934
chr14	47254252	47301677	+	47254252;47290570	47290307;47301677	ES	0.5	50	50	ENSMUST00000022386.15	ENSMUSG00000021838.18	Samd4	chr14	protein_coding	sterile alpha motif domain containing 4
chr14	47121099	47121856	+	47120625	47121856	A5SS	0.5	50	50	ENSMUST00000022386.15	ENSMUSG00000021838.18	Samd4	chr14	protein_coding	sterile alpha motif domain containing 4
chr14	47239098	47253734	+	47122473	47253734	A5SS	0.5	50	50	ENSMUST00000022386.15	ENSMUSG00000021838.18	Samd4	chr14	protein_coding	sterile alpha motif domain containing 4
chr14	47306548	47311293	+	47303931	47311293	A5SS	0.5	50	50	ENSMUST00000022386.15	ENSMUSG00000021838.18	Samd4	chr14	protein_coding	sterile alpha motif domain containing 4
chr14	47324858	47325216	+	47321072	47325216	A5SS	0.5	50	50	ENSMUST00000022386.15	ENSMUSG00000021838.18	Samd4	chr14	protein_coding	sterile alpha motif domain containing 4
chr14	47239098	47240565	+	47239098	47253734	A3SS	0.5	50	50	ENSMUST00000125113.9	ENSMUSG00000021838.18	Samd4	chr14	protein_coding	sterile alpha motif domain containing 4
chr14	47347213	47350093	-	47336111	47350093	A3SS	0.5	50	50	ENSMUST00000127429.2	ENSMUSG00000072589.5	Gm10371	chr14	lncRNA	predicted gene 10371
chr14	47488348	47493561	-	47488348;47489489	47489375;47493561	ES	0.5	50	50	ENSMUST00000187531.8	ENSMUSG00000037572.18	Wdhd1	chr14	protein_coding	WD repeat and HMG-box DNA binding protein 1
chr14	47504519	47505529	-	47504630	47505529	A3SS	0.5	50	50	ENSMUST00000187531.8	ENSMUSG00000037572.18	Wdhd1	chr14	protein_coding	WD repeat and HMG-box DNA binding protein 1
chr14	47548570	47550942	+	47548570	47556869	A3SS	0.5	50	50	ENSMUST00000166743.9	ENSMUSG00000021840.18	Mapk1ip1l	chr14	protein_coding	mitogen-activated protein kinase 1 interacting protein 1-like
chr14	47536389	47546024	+	47535862	47546024	A5SS	0.5	50	50	ENSMUST00000166743.9	ENSMUSG00000021840.18	Mapk1ip1l	chr14	protein_coding	mitogen-activated protein kinase 1 interacting protein 1-like
chr14	47611409	47616980	+	47605825	47616980	A5SS	0.25	50	50	ENSMUST00000151405.9	ENSMUSG00000050335.18	Lgals3	chr14	protein_coding	lectin, galactose binding, soluble 3
chr14	47611436	47616980	+	47605825	47616980	A5SS	0.25	50	50	ENSMUST00000151405.9	ENSMUSG00000050335.18	Lgals3	chr14	protein_coding	lectin, galactose binding, soluble 3
chr14	47611579	47616980	+	47605825	47616980	A5SS	0.25	50	50	ENSMUST00000151405.9	ENSMUSG00000050335.18	Lgals3	chr14	protein_coding	lectin, galactose binding, soluble 3
chr14	47611409	47616936	+	47611409	47616980	A3SS	0.5	50	50	ENSMUST00000142734.8	ENSMUSG00000050335.18	Lgals3	chr14	protein_coding	lectin, galactose binding, soluble 3
chr14	47611436	47616980	+	47611409	47616980	A5SS	0.25	50	50	ENSMUST00000142734.8	ENSMUSG00000050335.18	Lgals3	chr14	protein_coding	lectin, galactose binding, soluble 3
chr14	47611579	47616980	+	47611409	47616980	A5SS	0.25	50	50	ENSMUST00000142734.8	ENSMUSG00000050335.18	Lgals3	chr14	protein_coding	lectin, galactose binding, soluble 3
chr14	47611436	47616936	+	47611436	47616980	A3SS	0.5	50	50	ENSMUST00000150290.9	ENSMUSG00000050335.18	Lgals3	chr14	protein_coding	lectin, galactose binding, soluble 3
chr14	47611579	47616980	+	47611436	47616980	A5SS	0.25	50	50	ENSMUST00000150290.9	ENSMUSG00000050335.18	Lgals3	chr14	protein_coding	lectin, galactose binding, soluble 3
chr14	47611409	47616936	+	47611436	47616936	A5SS	0.5	50	50	ENSMUST00000226585.2	ENSMUSG00000050335.18	Lgals3	chr14	protein_coding	lectin, galactose binding, soluble 3
chr14	47625576	47627900	-	47626915	47627900	A3SS&ES	0.5	50	50	ENSMUST00000043296.10	ENSMUSG00000037544.15	Dlgap5	chr14	protein_coding	DLG associated protein 5
chr14	47643322	47643796	-	47643358	47643796	A3SS	0.5	50	50	ENSMUST00000043296.10	ENSMUSG00000037544.15	Dlgap5	chr14	protein_coding	DLG associated protein 5
chr14	47651807	47653793	-	47651296	47653793	A3SS	0.5	50	50	ENSMUST00000043296.10	ENSMUSG00000037544.15	Dlgap5	chr14	protein_coding	DLG associated protein 5
chr14	47710174	47763662	+	47703011	47763662	A5SS	0.12	50	50	ENSMUST00000226395.2	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47710174	47766632	+	47763771	47766632	A5SS&ES	0.25	50	50	ENSMUST00000226395.2	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47710721	47763662	+	47703011	47763662	A5SS	0.12	50	50	ENSMUST00000226395.2	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47738327	47763662	+	47703011	47763662	A5SS	0.12	50	50	ENSMUST00000226395.2	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47738327	47766632	+	47763771	47766632	A5SS&ES	0.25	50	50	ENSMUST00000226395.2	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47742589	47763662	+	47703011	47763662	A5SS	0.12	50	50	ENSMUST00000226395.2	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47742589	47766632	+	47763771	47766632	A5SS&ES	0.25	50	50	ENSMUST00000226395.2	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47744903	47763662	+	47703011	47763662	A5SS	0.12	50	50	ENSMUST00000226395.2	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47745724	47763662	+	47703011	47763662	A5SS	0.12	50	50	ENSMUST00000226395.2	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47746686	47763662	+	47703011	47763662	A5SS	0.12	50	50	ENSMUST00000226395.2	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47710174;47738327	47738251;47766632	+	47710174	47766632	cassetteExon	0.5	100	100	ENSMUST00000043112.9	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47710174;47742589	47742443;47766632	+	47710174	47766632	cassetteExon	0.5	100	100	ENSMUST00000043112.9	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47710174;47763771	47763662;47766632	+	47710174	47766632	cassetteExon	0.5	100	100	ENSMUST00000043112.9	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47710174	47763662	+	47710174;47738327	47738251;47763662	ES	0.14	50	50	ENSMUST00000163324.8	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47738327	47766632	+	47738327;47763771	47763662;47766632	ES	0.25	50	50	ENSMUST00000163324.8	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47710174;47742589	47742443;47763662	+	47710174;47738327	47738251;47763662	MXE	0.5	100	100	ENSMUST00000163324.8	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47710174;47742589	47742443;47766632	+	47710174;47763771	47738251;47766632	MXE	0.5	100	100	ENSMUST00000163324.8	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47738327;47742589	47742443;47763662	+	47738327	47763662	cassetteExon	0.5	100	100	ENSMUST00000163324.8	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47738327;47742589	47742443;47766632	+	47738327;47763771	47763662;47766632	MXE	0.5	100	100	ENSMUST00000163324.8	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47710721	47763662	+	47738327	47763662	A5SS&ES	0.14	50	50	ENSMUST00000163324.8	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47744903	47763662	+	47738327	47763662	A5SS	0.14	50	50	ENSMUST00000163324.8	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47745724	47763662	+	47738327	47763662	A5SS	0.14	50	50	ENSMUST00000163324.8	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47746686	47763662	+	47738327	47763662	A5SS	0.14	50	50	ENSMUST00000163324.8	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47710174;47742589	47742443;47766632	+	47710174;47738327	47738251;47766632	MXE	0.5	100	100	ENSMUST00000227162.2	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47710174;47763771	47763662;47766632	+	47710174;47738327	47738251;47766632	MXE	0.5	100	100	ENSMUST00000227162.2	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47738327;47742589	47742443;47766632	+	47738327	47766632	cassetteExon	0.5	100	100	ENSMUST00000227162.2	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47710174;47738327	47738251;47742443	+	47710174	47742443	cassetteExon	0.5	100	100	ENSMUST00000227601.2	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47710174;47763771	47763662;47766632	+	47710174;47742589	47742443;47766632	MXE	0.5	100	100	ENSMUST00000227601.2	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47742589;47763771	47763662;47766632	+	47742589	47766632	cassetteExon	0.5	100	100	ENSMUST00000227601.2	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47742589	47744722	+	47742589	47766632	A3SS	0.33	50	50	ENSMUST00000227601.2	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47711680	47742443	+	47710174	47742443	A5SS	0.33	50	50	ENSMUST00000227601.2	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47710174;47742589	47742443;47763662	+	47710174	47763662	cassetteExon	0.5	100	100	ENSMUST00000168833.9	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47710721	47763662	+	47710174	47763662	A5SS	0.12	50	50	ENSMUST00000168833.9	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47744903	47763662	+	47710174	47763662	A5SS	0.12	50	50	ENSMUST00000168833.9	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47745724	47763662	+	47710174	47763662	A5SS	0.12	50	50	ENSMUST00000168833.9	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47746686	47763662	+	47710174	47763662	A5SS	0.12	50	50	ENSMUST00000168833.9	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47744903	47763662	+	47744903;47746686	47746514;47763662	ES	0.14	50	50	ENSMUST00000228019.2	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47710174;47738327	47738251;47763662	+	47710174;47746686	47742443;47763662	MXE	0.5	100	100	ENSMUST00000228019.2	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47710174;47738327	47738251;47766632	+	47710174;47763771	47742443;47766632	MXE	0.5	100	100	ENSMUST00000228019.2	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47744903;47745724	47745633;47763662	+	47744903;47746686	47746514;47763662	MXE	0.5	100	100	ENSMUST00000228019.2	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47710721	47763662	+	47746686	47763662	A5SS&ES	0.14	50	50	ENSMUST00000228019.2	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47744903	47763662	+	47744903;47745724	47745633;47763662	ES	0.14	50	50	ENSMUST00000095941.9	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47710721	47763662	+	47745724	47763662	A5SS&ES	0.14	50	50	ENSMUST00000095941.9	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47711680	47742443	+	47738327	47742443	A5SS&ES	0.33	50	50	ENSMUST00000095941.9	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47742589	47763662	+	47742589;47744903	47744722;47763662	ES	0.14	50	50	ENSMUST00000226954.2	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47710721	47763662	+	47744903	47763662	A5SS&ES	0.14	50	50	ENSMUST00000226954.2	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47742589	47763662	+	47710721	47763662	A5SS	0.12	50	50	ENSMUST00000228740.2	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47738327	47763662	+	47742589	47763662	A5SS&ES	0.2	50	50	ENSMUST00000226432.2	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47745724	47763662	+	47742589	47763662	A5SS	0.2	50	50	ENSMUST00000226432.2	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47746686	47763662	+	47742589	47763662	A5SS	0.2	50	50	ENSMUST00000226432.2	ENSMUSG00000037536.15	Fbxo34	chr14	protein_coding	F-box protein 34
chr14	47796671	47798078	-	47796673	47798078	A3SS	0.5	50	50	ENSMUST00000226299.2	ENSMUSG00000037526.8	Atg14	chr14	protein_coding	autophagy related 14
chr14	47802977	47805643	-	47798140	47805643	A3SS	0.5	50	50	ENSMUST00000226299.2	ENSMUSG00000037526.8	Atg14	chr14	protein_coding	autophagy related 14
chr14	47941734	47943220	+	47941734;47941945	47941877;47943220	ES	0.5	50	50	ENSMUST00000187839.8	ENSMUSG00000021843.18	Ktn1	chr14	protein_coding	kinectin 1
chr14	47952179	47957653	+	47952179;47954417	47954331;47957653	ES	0.5	50	50	ENSMUST00000187839.8	ENSMUSG00000021843.18	Ktn1	chr14	protein_coding	kinectin 1
chr14	47962427	47963683	+	47962427;47963457	47963386;47963683	ES	0.5	50	50	ENSMUST00000187839.8	ENSMUSG00000021843.18	Ktn1	chr14	protein_coding	kinectin 1
chr14	47963766	47967797	+	47963766;47964011	47963928;47967797	ES	0.5	50	50	ENSMUST00000187839.8	ENSMUSG00000021843.18	Ktn1	chr14	protein_coding	kinectin 1
chr14	47970779	47973557	+	47970779;47971721	47971612;47973557	ES	0.33	50	50	ENSMUST00000187839.8	ENSMUSG00000021843.18	Ktn1	chr14	protein_coding	kinectin 1
chr14	47901772	47904758	+	47901772	47904753	A3SS	0.5	50	50	ENSMUST00000187839.8	ENSMUSG00000021843.18	Ktn1	chr14	protein_coding	kinectin 1
chr14	47886846	47901213	+	47886034	47901213	A5SS	0.25	50	50	ENSMUST00000187839.8	ENSMUSG00000021843.18	Ktn1	chr14	protein_coding	kinectin 1
chr14	47886896	47901213	+	47886034	47901213	A5SS	0.25	50	50	ENSMUST00000187839.8	ENSMUSG00000021843.18	Ktn1	chr14	protein_coding	kinectin 1
chr14	47889843	47901213	+	47886034	47901213	A5SS	0.25	50	50	ENSMUST00000187839.8	ENSMUSG00000021843.18	Ktn1	chr14	protein_coding	kinectin 1
chr14	47971727	47973557	+	47971721	47973557	A5SS	0.33	50	50	ENSMUST00000187839.8	ENSMUSG00000021843.18	Ktn1	chr14	protein_coding	kinectin 1
chr14	47886896;47889843	47889719;47901213	+	47886896	47901213	cassetteExon	0.5	100	100	ENSMUST00000190252.7	ENSMUSG00000021843.18	Ktn1	chr14	protein_coding	kinectin 1
chr14	47886846	47901213	+	47886896	47901213	A5SS	0.25	50	50	ENSMUST00000190252.7	ENSMUSG00000021843.18	Ktn1	chr14	protein_coding	kinectin 1
chr14	47889843	47901213	+	47886846	47901213	A5SS	0.25	50	50	ENSMUST00000186466.3	ENSMUSG00000021843.18	Ktn1	chr14	protein_coding	kinectin 1
chr14	47970779;47971727	47971612;47973557	+	47970779	47973557	cassetteExon	0.5	100	100	ENSMUST00000189986.7	ENSMUSG00000021843.18	Ktn1	chr14	protein_coding	kinectin 1
chr14	47970779	47973557	+	47970779	47971612	A3SS&ES	0.5	50	50	ENSMUST00000191018.7	ENSMUSG00000021843.18	Ktn1	chr14	protein_coding	kinectin 1
chr14	47962427	47963683	+	47962427	47963386	A3SS	0.5	50	50	ENSMUST00000188263.2	ENSMUSG00000021843.18	Ktn1	chr14	protein_coding	kinectin 1
chr14	48033545	48042479	-	48033545	48042580	A5SS	0.5	50	50	ENSMUST00000226126.2	ENSMUSG00000115215.2	Gm41148	chr14	lncRNA	predicted gene, 41148
chr14	48052012	48060363	+	48052012;48060256	48060151;48060363	ES	0.5	50	50	ENSMUST00000226509.2	ENSMUSG00000115310.2	Gm35360	chr14	lncRNA	predicted gene, 35360
chr14	48136604	48136993	+	48136549	48136993	A5SS	0.5	50	50	ENSMUST00000228579.2	ENSMUSG00000115609.2	4930447J18Rik	chr14	lncRNA	RIKEN cDNA 4930447J18 gene
chr14	48140488	48181045	+	48140488	48152907	3pMXE	0.5	50	50	ENSMUST00000226143.2	ENSMUSG00000115609.2	4930447J18Rik	chr14	lncRNA	RIKEN cDNA 4930447J18 gene
chr14	48136927	48140436	+	48137120	48140436	A5SS&ES	0.5	50	50	ENSMUST00000226143.2	ENSMUSG00000115609.2	4930447J18Rik	chr14	lncRNA	RIKEN cDNA 4930447J18 gene
chr14	48358690	48477667	+	48358690;48405783	48405654;48477667	ES	0.5	50	50	ENSMUST00000073150.6	ENSMUSG00000021846.10	Peli2	chr14	protein_coding	pellino 2
chr14	48490222	48517475	+	48490222	48493473	3pMXE	0.5	50	50	ENSMUST00000073150.6	ENSMUSG00000021846.10	Peli2	chr14	protein_coding	pellino 2
chr14	48405783	48416598	+	48405783	48477667	A3SS	0.33	50	50	ENSMUST00000073150.6	ENSMUSG00000021846.10	Peli2	chr14	protein_coding	pellino 2
chr14	48405783	48464795	+	48405783	48477667	A3SS	0.33	50	50	ENSMUST00000073150.6	ENSMUSG00000021846.10	Peli2	chr14	protein_coding	pellino 2
chr14	48359615	48405654	+	48358690	48405654	A5SS	0.5	50	50	ENSMUST00000073150.6	ENSMUSG00000021846.10	Peli2	chr14	protein_coding	pellino 2
chr14	48405783	48464795	+	48405783	48416598	3pMXE	0.33	50	50	ENSMUST00000226513.2	ENSMUSG00000021846.10	Peli2	chr14	protein_coding	pellino 2
chr14	48438147	48464795	+	48405783	48464795	A5SS	0.5	50	50	ENSMUST00000228456.2	ENSMUSG00000021846.10	Peli2	chr14	protein_coding	pellino 2
chr14	48358690	48477667	+	48405783	48477667	5pMXE	0.5	50	50	ENSMUST00000227362.2	ENSMUSG00000021846.10	Peli2	chr14	protein_coding	pellino 2
chr14	48689514	48711423	+	48689514;48709958	48709781;48711423	ES	0.5	50	50	ENSMUST00000227440.2	ENSMUSG00000036339.19	Tmem260	chr14	protein_coding	transmembrane protein 260
chr14	48733920	48742702	+	48733920;48737612	48737464;48742702	ES	0.5	50	50	ENSMUST00000227440.2	ENSMUSG00000036339.19	Tmem260	chr14	protein_coding	transmembrane protein 260
chr14	48689514;48692767	48692538;48709781	+	48689514	48709781	cassetteExon	0.5	100	100	ENSMUST00000227440.2	ENSMUSG00000036339.19	Tmem260	chr14	protein_coding	transmembrane protein 260
chr14	48746582;48749608	48749360;48757793	+	48746582	48757793	cassetteExon	0.5	100	100	ENSMUST00000227440.2	ENSMUSG00000036339.19	Tmem260	chr14	protein_coding	transmembrane protein 260
chr14	48683792	48688600	+	48684060	48688600	A5SS	0.5	50	50	ENSMUST00000227440.2	ENSMUSG00000036339.19	Tmem260	chr14	protein_coding	transmembrane protein 260
chr14	48755743	48757793	+	48746582	48757793	A5SS	0.33	50	50	ENSMUST00000227440.2	ENSMUSG00000036339.19	Tmem260	chr14	protein_coding	transmembrane protein 260
chr14	48746582	48757793	+	48746582	48749360	3pMXE	0.5	50	50	ENSMUST00000124720.8	ENSMUSG00000036339.19	Tmem260	chr14	protein_coding	transmembrane protein 260
chr14	48755743	48757793	+	48749608	48757793	A5SS	0.33	50	50	ENSMUST00000226422.2	ENSMUSG00000036339.19	Tmem260	chr14	protein_coding	transmembrane protein 260
chr14	48733920	48742702	+	48733920	48737464	3pMXE	0.5	50	50	ENSMUST00000133744.8	ENSMUSG00000036339.19	Tmem260	chr14	protein_coding	transmembrane protein 260
chr14	48689514	48692538	+	48689514	48711423	A3SS	0.33	50	50	ENSMUST00000153765.8	ENSMUSG00000036339.19	Tmem260	chr14	protein_coding	transmembrane protein 260
chr14	48689514	48711423	+	48709958	48711423	5pMXE	0.5	50	50	ENSMUST00000228697.2	ENSMUSG00000036339.19	Tmem260	chr14	protein_coding	transmembrane protein 260
chr14	48715151	48717761	+	48715151	48724198	A3SS	0.5	50	50	ENSMUST00000228697.2	ENSMUSG00000036339.19	Tmem260	chr14	protein_coding	transmembrane protein 260
chr14	48722510	48724198	+	48715151	48724198	A5SS	0.5	50	50	ENSMUST00000228697.2	ENSMUSG00000036339.19	Tmem260	chr14	protein_coding	transmembrane protein 260
chr14	48762260	48771598	+	48762260;48765240	48764908;48771598	ES	0.5	50	50	ENSMUST00000227146.2	ENSMUSG00000115756.2	Gm49519	chr14	lncRNA	predicted gene, 49519
chr14	48771680	48795017	+	48771680	48781276	3pMXE	0.5	50	50	ENSMUST00000227146.2	ENSMUSG00000115756.2	Gm49519	chr14	lncRNA	predicted gene, 49519
chr14	48775940	48781276	+	48771680	48781276	A5SS	0.5	50	50	ENSMUST00000227146.2	ENSMUSG00000115756.2	Gm49519	chr14	lncRNA	predicted gene, 49519
chr14	48775940	48795017	+	48771680	48795017	A5SS	0.5	50	50	ENSMUST00000227732.2	ENSMUSG00000115756.2	Gm49519	chr14	lncRNA	predicted gene, 49519
chr14	48762260	48771598	+	48762260	48764908	3pMXE	0.5	50	50	ENSMUST00000226673.2	ENSMUSG00000115756.2	Gm49519	chr14	lncRNA	predicted gene, 49519
chr14	48775940	48795017	+	48775940	48781276	3pMXE	0.5	50	50	ENSMUST00000228808.2	ENSMUSG00000115725.2	4930572G02Rik	chr14	lncRNA	RIKEN cDNA 4930572G02 gene
chr14	48873806	48876558	+	48873780	48876558	A5SS	0.5	50	50	ENSMUST00000228915.2	ENSMUSG00000115376.2	Gm35766	chr14	lncRNA	predicted gene, 35766
chr14	48900116	48904657	-	48900116;48902847	48902436;48904657	ES	0.5	50	50	ENSMUST00000226501.2	ENSMUSG00000021848.17	Otx2	chr14	protein_coding	orthodenticle homeobox 2
chr14	48904730	48911109	-	48904730	48904885	5pMXE	0.5	50	50	ENSMUST00000226501.2	ENSMUSG00000021848.17	Otx2	chr14	protein_coding	orthodenticle homeobox 2
chr14	48898931	48899901	-	48898907	48899901	A3SS	0.5	50	50	ENSMUST00000226501.2	ENSMUSG00000021848.17	Otx2	chr14	protein_coding	orthodenticle homeobox 2
chr14	48898907	48899216	-	48898907	48899901	A5SS	0.5	50	50	ENSMUST00000226501.2	ENSMUSG00000021848.17	Otx2	chr14	protein_coding	orthodenticle homeobox 2
chr14	48900116	48902722	-	48900116	48902436	A5SS	0.33	50	50	ENSMUST00000226501.2	ENSMUSG00000021848.17	Otx2	chr14	protein_coding	orthodenticle homeobox 2
chr14	48900116	48904657	-	48900116	48902436	5pMXE	0.33	50	50	ENSMUST00000118578.9	ENSMUSG00000021848.17	Otx2	chr14	protein_coding	orthodenticle homeobox 2
chr14	48900116;48902847	48902722;48904657	-	48900116	48904657	cassetteExon	0.5	100	100	ENSMUST00000227404.2	ENSMUSG00000021848.17	Otx2	chr14	protein_coding	orthodenticle homeobox 2
chr14	48900116	48904657	-	48900116	48902722	5pMXE	0.33	50	50	ENSMUST00000119739.2	ENSMUSG00000021848.17	Otx2	chr14	protein_coding	orthodenticle homeobox 2
chr14	48907906	48935291	+	48907906	48909760	3pMXE	0.25	50	50	ENSMUST00000228743.2	ENSMUSG00000098682.9	Otx2os1	chr14	lncRNA	orthodenticle homeobox 2 opposite strand 1
chr14	48907906	48955067	+	48907906	48909760	3pMXE	0.25	50	50	ENSMUST00000228743.2	ENSMUSG00000098682.9	Otx2os1	chr14	lncRNA	orthodenticle homeobox 2 opposite strand 1
chr14	48907906	49098764	+	48907906	48909760	3pMXE	0.25	50	50	ENSMUST00000228743.2	ENSMUSG00000098682.9	Otx2os1	chr14	lncRNA	orthodenticle homeobox 2 opposite strand 1
chr14	48906853	48907751	+	48906640	48907751	A5SS	0.5	50	50	ENSMUST00000228743.2	ENSMUSG00000098682.9	Otx2os1	chr14	lncRNA	orthodenticle homeobox 2 opposite strand 1
chr14	48907906	48935291	+	48907906	49098764	A3SS	0.25	50	50	ENSMUST00000228153.2	ENSMUSG00000098682.9	Otx2os1	chr14	lncRNA	orthodenticle homeobox 2 opposite strand 1
chr14	48907906	48955067	+	48907906	49098764	A3SS	0.25	50	50	ENSMUST00000228153.2	ENSMUSG00000098682.9	Otx2os1	chr14	lncRNA	orthodenticle homeobox 2 opposite strand 1
chr14	48907906;48935387	48935291;48955067	+	48907906	48955067	cassetteExon	0.5	100	100	ENSMUST00000227424.2	ENSMUSG00000098682.9	Otx2os1	chr14	lncRNA	orthodenticle homeobox 2 opposite strand 1
chr14	48955218	48957119	+	48955218	49030589	A3SS	0.5	50	50	ENSMUST00000227424.2	ENSMUSG00000098682.9	Otx2os1	chr14	lncRNA	orthodenticle homeobox 2 opposite strand 1
chr14	48937866	48955067	+	48907906	48955067	A5SS	0.33	50	50	ENSMUST00000227424.2	ENSMUSG00000098682.9	Otx2os1	chr14	lncRNA	orthodenticle homeobox 2 opposite strand 1
chr14	48937866	49030589	+	48955218	49030589	A5SS&ES	0.5	50	50	ENSMUST00000227424.2	ENSMUSG00000098682.9	Otx2os1	chr14	lncRNA	orthodenticle homeobox 2 opposite strand 1
chr14	48937866	49093051	+	48937866	49030589	3pMXE	0.33	50	50	ENSMUST00000183803.8	ENSMUSG00000098682.9	Otx2os1	chr14	lncRNA	orthodenticle homeobox 2 opposite strand 1
chr14	48907906;48955218	48955067;49030589	+	48907906;48937866	48935291;49030589	MXE	0.5	100	100	ENSMUST00000183803.8	ENSMUSG00000098682.9	Otx2os1	chr14	lncRNA	orthodenticle homeobox 2 opposite strand 1
chr14	48935387;48955218	48955067;49030589	+	48935387;48937866	48937703;49030589	MXE	0.5	100	100	ENSMUST00000183803.8	ENSMUSG00000098682.9	Otx2os1	chr14	lncRNA	orthodenticle homeobox 2 opposite strand 1
chr14	48937866;48955218	48955067;49030589	+	48937866	49030589	cassetteExon	0.5	100	100	ENSMUST00000183803.8	ENSMUSG00000098682.9	Otx2os1	chr14	lncRNA	orthodenticle homeobox 2 opposite strand 1
chr14	48911290	48935291	+	48907906	48935291	A5SS	0.5	50	50	ENSMUST00000183803.8	ENSMUSG00000098682.9	Otx2os1	chr14	lncRNA	orthodenticle homeobox 2 opposite strand 1
chr14	48935387	48955067	+	48935387;48937866	48937703;48955067	ES	0.33	50	50	ENSMUST00000183522.8	ENSMUSG00000098682.9	Otx2os1	chr14	lncRNA	orthodenticle homeobox 2 opposite strand 1
chr14	48935387	48955067	+	48935387	48937703	A3SS&ES	0.5	50	50	ENSMUST00000227221.2	ENSMUSG00000098682.9	Otx2os1	chr14	lncRNA	orthodenticle homeobox 2 opposite strand 1
chr14	48937866	48955067	+	48937866	49093051	A3SS	0.33	50	50	ENSMUST00000227221.2	ENSMUSG00000098682.9	Otx2os1	chr14	lncRNA	orthodenticle homeobox 2 opposite strand 1
chr14	49118387;49123004	49122922;49123346	+	49118387	49123346	cassetteExon	0.5	100	100	ENSMUST00000227828.2	ENSMUSG00000115008.2	4933429O19Rik	chr14	lncRNA	RIKEN cDNA 4933429O19 gene
chr14	49118387	49122300	+	49118387	49123346	A3SS	0.33	50	50	ENSMUST00000227828.2	ENSMUSG00000115008.2	4933429O19Rik	chr14	lncRNA	RIKEN cDNA 4933429O19 gene
chr14	49118387;49122394	49122300;49122922	+	49118387	49122922	cassetteExon	0.5	100	100	ENSMUST00000228316.2	ENSMUSG00000115008.2	4933429O19Rik	chr14	lncRNA	RIKEN cDNA 4933429O19 gene
chr14	49255017	49260656	-	49255017;49256979	49256859;49260656	ES	0.5	50	50	ENSMUST00000162175.9	ENSMUSG00000061244.15	Exoc5	chr14	protein_coding	exocyst complex component 5
chr14	49276840	49286161	-	49276840;49280006	49279942;49286161	ES	0.5	50	50	ENSMUST00000162175.9	ENSMUSG00000061244.15	Exoc5	chr14	protein_coding	exocyst complex component 5
chr14	49280006	49288777	-	49280006;49286355	49286161;49288777	ES	0.5	50	50	ENSMUST00000162175.9	ENSMUSG00000061244.15	Exoc5	chr14	protein_coding	exocyst complex component 5
chr14	49276840;49286355	49286161;49288777	-	49276840;49280006	49279942;49288777	MXE	0.5	100	100	ENSMUST00000161504.8	ENSMUSG00000061244.15	Exoc5	chr14	protein_coding	exocyst complex component 5
chr14	49255017	49260656	-	49255017	49256859	5pMXE	0.5	50	50	ENSMUST00000160833.2	ENSMUSG00000061244.15	Exoc5	chr14	protein_coding	exocyst complex component 5
chr14	49311651	49317693	+	49311651;49316379	49316152;49317693	ES	0.5	50	50	ENSMUST00000227431.2	ENSMUSG00000036291.7	Ap5m1	chr14	protein_coding	adaptor-related protein complex 5, mu 1 subunit
chr14	49311199	49316152	+	49311651	49316152	A5SS	0.5	50	50	ENSMUST00000227431.2	ENSMUSG00000036291.7	Ap5m1	chr14	protein_coding	adaptor-related protein complex 5, mu 1 subunit
chr14	49311199	49316152	+	49311199;49311651	49311427;49316152	ES	0.5	50	50	ENSMUST00000227410.2	ENSMUSG00000036291.7	Ap5m1	chr14	protein_coding	adaptor-related protein complex 5, mu 1 subunit
chr14	49311199;49311651	49311427;49317693	+	49311199;49316379	49316152;49317693	MXE	0.5	100	100	ENSMUST00000227608.2	ENSMUSG00000036291.7	Ap5m1	chr14	protein_coding	adaptor-related protein complex 5, mu 1 subunit
chr14	49323816	49331290	+	49323816	49327657	3pMXE	0.5	50	50	ENSMUST00000227066.2	ENSMUSG00000036291.7	Ap5m1	chr14	protein_coding	adaptor-related protein complex 5, mu 1 subunit
chr14	49351159	49359879	-	49342076	49359879	A3SS	0.5	50	50	ENSMUST00000227409.2	ENSMUSG00000115737.2	Rpl19-ps3	chr14	transcribed_processed_pseudogene	ribosomal protein L19, pseudogene 3
chr14	49410850	49418163	+	49410850;49415632	49415509;49418163	ES	0.5	50	50	ENSMUST00000153488.9	ENSMUSG00000036282.16	Naa30	chr14	protein_coding	N(alpha)-acetyltransferase 30, NatC catalytic subunit
chr14	49410850	49418163	+	49415632	49418163	A5SS&ES	0.5	50	50	ENSMUST00000037362.6	ENSMUSG00000036282.16	Naa30	chr14	protein_coding	N(alpha)-acetyltransferase 30, NatC catalytic subunit
chr14	49469712	49470269	-	49464258	49470269	A3SS	0.5	50	50	ENSMUST00000022398.15	ENSMUSG00000021850.15	ccdc198	chr14	protein_coding	coiled-coil domain containing 198
chr14	49472021	49473337	-	49472018	49473337	A3SS	0.5	50	50	ENSMUST00000022398.15	ENSMUSG00000021850.15	ccdc198	chr14	protein_coding	coiled-coil domain containing 198
chr14	49473423	49482518	-	49473423	49481186	A5SS&ES	0.5	50	50	ENSMUST00000022398.15	ENSMUSG00000021850.15	ccdc198	chr14	protein_coding	coiled-coil domain containing 198
chr14	49541533	49541627	-	49538443	49541627	A3SS	0.5	50	50	ENSMUST00000138884.8	ENSMUSG00000021852.15	Slc35f4	chr14	protein_coding	solute carrier family 35, member F4
chr14	49543787	49551444	-	49543787	49551056	A5SS&ES	0.5	50	50	ENSMUST00000138884.8	ENSMUSG00000021852.15	Slc35f4	chr14	protein_coding	solute carrier family 35, member F4
chr14	49919870	49920069	-	49919873	49920069	A3SS	0.5	50	50	ENSMUST00000036972.14	ENSMUSG00000036242.16	Armh4	chr14	protein_coding	armadillo-like helical domain containing 4
chr14	49966785	49988876	-	49926755	49988876	A3SS	0.5	50	50	ENSMUST00000036972.14	ENSMUSG00000036242.16	Armh4	chr14	protein_coding	armadillo-like helical domain containing 4
chr14	50132708	50139366	-	50133263	50139366	A3SS	0.5	50	50	ENSMUST00000053290.8	ENSMUSG00000048933.9	Olfr722	chr14	protein_coding	olfactory receptor 722
chr14	50322165	50328294	-	50322165;50328006	50327822;50328294	ES	0.25	50	50	ENSMUST00000217319.2	ENSMUSG00000060523.6	Olfr726	chr14	protein_coding	olfactory receptor 726
chr14	50322165;50325889	50325844;50327822	-	50322165	50327822	cassetteExon	0.5	100	100	ENSMUST00000217319.2	ENSMUSG00000060523.6	Olfr726	chr14	protein_coding	olfactory receptor 726
chr14	50327882	50328294	-	50328006	50328294	A3SS	0.25	50	50	ENSMUST00000217319.2	ENSMUSG00000060523.6	Olfr726	chr14	protein_coding	olfactory receptor 726
chr14	50327892	50328294	-	50328006	50328294	A3SS	0.25	50	50	ENSMUST00000217319.2	ENSMUSG00000060523.6	Olfr726	chr14	protein_coding	olfactory receptor 726
chr14	50322165	50328294	-	50322165	50325844	A5SS&ES	0.33	50	50	ENSMUST00000215105.2	ENSMUSG00000060523.6	Olfr726	chr14	protein_coding	olfactory receptor 726
chr14	50322165	50328294	-	50322165;50327882	50327822;50328294	ES	0.25	50	50	ENSMUST00000217422.2	ENSMUSG00000060523.6	Olfr726	chr14	protein_coding	olfactory receptor 726
chr14	50327892	50328294	-	50327882	50328294	A3SS	0.25	50	50	ENSMUST00000217422.2	ENSMUSG00000060523.6	Olfr726	chr14	protein_coding	olfactory receptor 726
chr14	50322165	50328294	-	50322165;50327892	50327822;50328294	ES	0.25	50	50	ENSMUST00000215278.3	ENSMUSG00000060523.6	Olfr726	chr14	protein_coding	olfactory receptor 726
chr14	50322165	50328294	-	50322165	50327822	A5SS	0.33	50	50	ENSMUST00000213345.2	ENSMUSG00000060523.6	Olfr726	chr14	protein_coding	olfactory receptor 726
chr14	50376761	50377730	-	50376699	50377730	A3SS	0.5	50	50	ENSMUST00000215329.2	ENSMUSG00000050030.6	Olfr728	chr14	protein_coding	olfactory receptor 728
chr14	50376761	50377730	-	50376761	50378071	A5SS	0.5	50	50	ENSMUST00000216423.2	ENSMUSG00000050030.6	Olfr728	chr14	protein_coding	olfactory receptor 728
chr14	50386361	50390322	-	50386361;50386939	50386913;50390322	ES	0.33	50	50	ENSMUST00000215451.2	ENSMUSG00000049011.3	Olfr729	chr14	protein_coding	olfactory receptor 729
chr14	50386977	50390322	-	50386939	50390322	A3SS	0.33	50	50	ENSMUST00000215451.2	ENSMUSG00000049011.3	Olfr729	chr14	protein_coding	olfactory receptor 729
chr14	50386361	50390322	-	50386361;50386977	50386913;50390322	ES	0.33	50	50	ENSMUST00000213163.2	ENSMUSG00000049011.3	Olfr729	chr14	protein_coding	olfactory receptor 729
chr14	50476149	50479123	-	50476386	50479123	A3SS	0.33	50	50	ENSMUST00000214388.2	ENSMUSG00000048080.3	Olfr731	chr14	protein_coding	olfactory receptor 731
chr14	50476358	50479123	-	50476386	50479123	A3SS	0.33	50	50	ENSMUST00000214388.2	ENSMUSG00000048080.3	Olfr731	chr14	protein_coding	olfactory receptor 731
chr14	50476358	50479123	-	50476149	50479123	A3SS	0.33	50	50	ENSMUST00000213322.2	ENSMUSG00000048080.3	Olfr731	chr14	protein_coding	olfactory receptor 731
chr14	50537999	50538876	-	50537999;50538655	50538627;50538876	ES	0.33	50	50	ENSMUST00000216195.2	ENSMUSG00000090874.3	Olfr733	chr14	protein_coding	olfactory receptor 733
chr14	50536773;50537999	50537890;50538876	-	50536773	50538876	cassetteExon	0.5	100	100	ENSMUST00000214372.2	ENSMUSG00000090874.3	Olfr733	chr14	protein_coding	olfactory receptor 733
chr14	50538655	50538876	-	50536773	50538876	A3SS	0.33	50	50	ENSMUST00000214372.2	ENSMUSG00000090874.3	Olfr733	chr14	protein_coding	olfactory receptor 733
chr14	50628049	50630057	+	50628049	50630204	A3SS	0.5	50	50	ENSMUST00000215263.2	ENSMUSG00000047716.5	Olfr736	chr14	protein_coding	olfactory receptor 736
chr14	50619420	50627959	+	50619337	50627959	A5SS	0.5	50	50	ENSMUST00000215263.2	ENSMUSG00000047716.5	Olfr736	chr14	protein_coding	olfactory receptor 736
chr14	50645166;50650891	50650824;50650992	+	50645166	50650992	cassetteExon	0.5	100	100	ENSMUST00000214853.2	ENSMUSG00000094692.3	Olfr738	chr14	protein_coding	olfactory receptor 738
chr14	50710609;50722509	50722409;50722906	+	50710609	50722906	cassetteExon	0.5	100	100	ENSMUST00000213903.2	ENSMUSG00000095765.4	Olfr741	chr14	protein_coding	olfactory receptor 741
chr14	50741248	50752652	+	50741248;50752254	50752154;50752652	ES	0.5	50	50	ENSMUST00000217437.2	ENSMUSG00000068431.4	Olfr742	chr14	protein_coding	olfactory receptor 742
chr14	50852497	50855670	+	50853291	50855670	A5SS	0.5	50	50	ENSMUST00000213668.2	ENSMUSG00000053815.6	Olfr744	chr14	protein_coding	olfactory receptor 744
chr14	50877030	50877758	+	50877100	50877758	A5SS	0.5	50	50	ENSMUST00000216105.2	ENSMUSG00000050028.6	Olfr745	chr14	protein_coding	olfactory receptor 745
chr14	50919102	50929064	-	50919102	50929935	A5SS	0.5	50	50	ENSMUST00000213238.2	ENSMUSG00000057179.7	Olfr747	chr14	protein_coding	olfactory receptor 747
chr14	50976659	50981716	-	50974630	50981716	A3SS	0.5	50	50	ENSMUST00000074674.5	ENSMUSG00000059069.6	Olfr749	chr14	protein_coding	olfactory receptor 749
chr14	50974630	50974808	-	50974630	50981716	A5SS	0.5	50	50	ENSMUST00000074674.5	ENSMUSG00000059069.6	Olfr749	chr14	protein_coding	olfactory receptor 749
chr14	51004727	51009573	-	51004744	51009573	A3SS	0.5	50	50	ENSMUST00000006451.8	ENSMUSG00000006288.9	Ttc5	chr14	protein_coding	tetratricopeptide repeat domain 5
chr14	51012907	51014719	-	51012839	51014719	A3SS	0.5	50	50	ENSMUST00000006451.8	ENSMUSG00000006288.9	Ttc5	chr14	protein_coding	tetratricopeptide repeat domain 5
chr14	51031331	51036515	-	51031331	51033093	5pMXE	0.5	50	50	ENSMUST00000095932.5	ENSMUSG00000071470.5	Ccnb1ip1	chr14	protein_coding	cyclin B1 interacting protein 1
chr14	51045444	51047463	+	51045444	51047531	A3SS	0.5	50	50	ENSMUST00000036126.7	ENSMUSG00000036023.7	Parp2	chr14	protein_coding	poly (ADP-ribose) polymerase family, member 2
chr14	51052412	51052809	+	51052423	51052809	A5SS	0.5	50	50	ENSMUST00000036126.7	ENSMUSG00000036023.7	Parp2	chr14	protein_coding	poly (ADP-ribose) polymerase family, member 2
chr14	51071024	51073449	-	51071024;51071534	51071371;51073449	ES	0.5	50	50	ENSMUST00000006444.9	ENSMUSG00000006281.9	Tep1	chr14	protein_coding	telomerase associated protein 1
chr14	51069296;51070488	51070338;51070911	-	51069296	51070911	cassetteExon	0.5	100	100	ENSMUST00000006444.9	ENSMUSG00000006281.9	Tep1	chr14	protein_coding	telomerase associated protein 1
chr14	51062011	51062189	-	51062066	51062189	A3SS	0.5	50	50	ENSMUST00000006444.9	ENSMUSG00000006281.9	Tep1	chr14	protein_coding	telomerase associated protein 1
chr14	51081814	51081991	-	51081887	51081991	A3SS	0.5	50	50	ENSMUST00000006444.9	ENSMUSG00000006281.9	Tep1	chr14	protein_coding	telomerase associated protein 1
chr14	51108013;51116191	51116087;51117494	+	51108013	51117494	cassetteExon	0.5	100	100	ENSMUST00000227351.2	ENSMUSG00000097431.3	Gm26782	chr14	lncRNA	predicted gene, 26782
chr14	51108013	51108693	+	51108013	51117494	A3SS	0.16	50	50	ENSMUST00000227351.2	ENSMUSG00000097431.3	Gm26782	chr14	lncRNA	predicted gene, 26782
chr14	51108013	51109208	+	51108013	51117494	A3SS	0.16	50	50	ENSMUST00000227351.2	ENSMUSG00000097431.3	Gm26782	chr14	lncRNA	predicted gene, 26782
chr14	51108013	51112371	+	51108013	51117494	A3SS	0.16	50	50	ENSMUST00000227351.2	ENSMUSG00000097431.3	Gm26782	chr14	lncRNA	predicted gene, 26782
chr14	51108013	51114129	+	51108013	51117494	A3SS	0.16	50	50	ENSMUST00000227351.2	ENSMUSG00000097431.3	Gm26782	chr14	lncRNA	predicted gene, 26782
chr14	51108013	51108693	+	51108013	51109208	A3SS	0.5	50	50	ENSMUST00000227207.2	ENSMUSG00000097431.3	Gm26782	chr14	lncRNA	predicted gene, 26782
chr14	51108013	51114129	+	51108013;51112419	51112371;51114129	ES	0.5	50	50	ENSMUST00000228078.2	ENSMUSG00000097431.3	Gm26782	chr14	lncRNA	predicted gene, 26782
chr14	51108013;51109283	51109208;51112371	+	51108013	51112371	cassetteExon	0.5	100	100	ENSMUST00000228078.2	ENSMUSG00000097431.3	Gm26782	chr14	lncRNA	predicted gene, 26782
chr14	51108013	51108693	+	51108013	51112371	A3SS	0.25	50	50	ENSMUST00000228078.2	ENSMUSG00000097431.3	Gm26782	chr14	lncRNA	predicted gene, 26782
chr14	51108013	51108693	+	51108013	51116087	A3SS	0.16	50	50	ENSMUST00000227103.2	ENSMUSG00000097431.3	Gm26782	chr14	lncRNA	predicted gene, 26782
chr14	51108013	51109208	+	51108013	51116087	A3SS	0.16	50	50	ENSMUST00000227103.2	ENSMUSG00000097431.3	Gm26782	chr14	lncRNA	predicted gene, 26782
chr14	51108013	51112371	+	51108013	51116087	A3SS	0.16	50	50	ENSMUST00000227103.2	ENSMUSG00000097431.3	Gm26782	chr14	lncRNA	predicted gene, 26782
chr14	51108013	51114129	+	51108013	51116087	A3SS	0.16	50	50	ENSMUST00000227103.2	ENSMUSG00000097431.3	Gm26782	chr14	lncRNA	predicted gene, 26782
chr14	51108013	51108693	+	51108013	51114129	A3SS	0.16	50	50	ENSMUST00000181482.2	ENSMUSG00000097431.3	Gm26782	chr14	lncRNA	predicted gene, 26782
chr14	51108013	51109208	+	51108013	51114129	A3SS	0.16	50	50	ENSMUST00000181482.2	ENSMUSG00000097431.3	Gm26782	chr14	lncRNA	predicted gene, 26782
chr14	51157276	51157387	-	51157248	51157387	A3SS	0.5	50	50	ENSMUST00000160393.8	ENSMUSG00000006289.15	Osgep	chr14	protein_coding	O-sialoglycoprotein endopeptidase
chr14	51154767	51154840	-	51154767	51154911	A5SS	0.5	50	50	ENSMUST00000160393.8	ENSMUSG00000006289.15	Osgep	chr14	protein_coding	O-sialoglycoprotein endopeptidase
chr14	51157506	51161993	-	51157506	51162121	A5SS	0.33	50	50	ENSMUST00000160393.8	ENSMUSG00000006289.15	Osgep	chr14	protein_coding	O-sialoglycoprotein endopeptidase
chr14	51157506	51161997	-	51157506	51162121	A5SS	0.33	50	50	ENSMUST00000160393.8	ENSMUSG00000006289.15	Osgep	chr14	protein_coding	O-sialoglycoprotein endopeptidase
chr14	51157506	51161997	-	51157506	51161993	A5SS	0.33	50	50	ENSMUST00000162177.8	ENSMUSG00000006289.15	Osgep	chr14	protein_coding	O-sialoglycoprotein endopeptidase
chr14	51163810	51163982	+	51163810	51163913	A3SS	0.5	50	50	ENSMUST00000049411.12	ENSMUSG00000035960.15	Apex1	chr14	protein_coding	apurinic/apyrimidinic endonuclease 1
chr14	51162491	51162670	+	51162486	51162670	A5SS	0.5	50	50	ENSMUST00000049411.12	ENSMUSG00000035960.15	Apex1	chr14	protein_coding	apurinic/apyrimidinic endonuclease 1
chr14	51166515	51167041	-	51166515;51166764	51166659;51167041	ES	0.5	50	50	ENSMUST00000160835.9	ENSMUSG00000035953.15	Pip4p1	chr14	protein_coding	phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1
chr14	51166515	51166627	-	51166515	51166659	A5SS	0.33	50	50	ENSMUST00000160835.9	ENSMUSG00000035953.15	Pip4p1	chr14	protein_coding	phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1
chr14	51167781	51168091	-	51167781	51168070	A5SS	0.5	50	50	ENSMUST00000160835.9	ENSMUSG00000035953.15	Pip4p1	chr14	protein_coding	phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1
chr14	51166515;51166764	51166627;51167041	-	51166515	51167041	cassetteExon	0.5	100	100	ENSMUST00000162957.8	ENSMUSG00000035953.15	Pip4p1	chr14	protein_coding	phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1
chr14	51166515	51167041	-	51166515	51166627	5pMXE	0.33	50	50	ENSMUST00000161669.2	ENSMUSG00000035953.15	Pip4p1	chr14	protein_coding	phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1
chr14	51166515	51167041	-	51166764	51167041	A3SS	0.5	50	50	ENSMUST00000160538.2	ENSMUSG00000035953.15	Pip4p1	chr14	protein_coding	phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1
chr14	51182050	51187715	+	51182050;51185478	51185309;51187715	ES	0.5	50	50	ENSMUST00000226871.2	ENSMUSG00000115338.3	Pnp	chr14	protein_coding	purine-nucleoside phosphorylase
chr14	51188479	51200562	+	51188479	51188861	3pMXE	0.5	50	50	ENSMUST00000048615.13	ENSMUSG00000115338.3	Pnp	chr14	protein_coding	purine-nucleoside phosphorylase
chr14	51188175	51188297	+	51188175	51188289	A3SS	0.5	50	50	ENSMUST00000048615.13	ENSMUSG00000115338.3	Pnp	chr14	protein_coding	purine-nucleoside phosphorylase
chr14	51182050	51187715	+	51182050	51185309	3pMXE	0.5	50	50	ENSMUST00000228712.2	ENSMUSG00000115338.3	Pnp	chr14	protein_coding	purine-nucleoside phosphorylase
chr14	51197141	51200562	+	51188479	51200562	A5SS	0.5	50	50	ENSMUST00000227052.2	ENSMUSG00000021871.20	Gm49342	chr14	protein_coding	predicted gene, 49342
chr14	51193915	51196972	+	51193685	51196972	A5SS	0.5	50	50	ENSMUST00000095925.5	ENSMUSG00000068417.9	Pnp2	chr14	protein_coding	purine-nucleoside phosphorylase 2
chr14	51245529	51246730	+	51245242	51246730	A5SS	0.5	50	50	ENSMUST00000164632.2	ENSMUSG00000021872.9	Rnase10	chr14	protein_coding	ribonuclease, RNase A family, 10 (non-active)
chr14	51328710	51338843	+	51328710	51342264	A3SS	0.5	50	50	ENSMUST00000022428.13	ENSMUSG00000021876.16	Rnase4	chr14	protein_coding	ribonuclease, RNase A family 4
chr14	51333930	51342264	+	51328710	51342264	A5SS	0.5	50	50	ENSMUST00000022428.13	ENSMUSG00000021876.16	Rnase4	chr14	protein_coding	ribonuclease, RNase A family 4
chr14	51333930	51338843	+	51333930	51342264	A3SS	0.5	50	50	ENSMUST00000169895.3	ENSMUSG00000021876.16	Rnase4	chr14	protein_coding	ribonuclease, RNase A family 4
chr14	51333930	51338843	+	51328710	51338843	A5SS	0.5	50	50	ENSMUST00000171688.9	ENSMUSG00000072115.12	Ang	chr14	protein_coding	angiogenin, ribonuclease, RNase A family, 5
chr14	51366621	51367835	+	51366621	51367605	A3SS	0.5	50	50	ENSMUST00000226194.2	ENSMUSG00000021880.8	Rnase6	chr14	protein_coding	ribonuclease, RNase A family, 6
chr14	51550425	51553316	+	51550425;51552998	51552907;51553316	ES	0.5	50	50	ENSMUST00000186974.2	ENSMUSG00000094991.3	Gm21718	chr14	lncRNA	predicted gene, 21718
chr14	51553442	51553991	+	51553637	51553991	A5SS	0.5	50	50	ENSMUST00000186974.2	ENSMUSG00000094991.3	Gm21718	chr14	lncRNA	predicted gene, 21718
chr14	51614842	51669170	+	51614842	51617855	3pMXE	0.33	50	50	ENSMUST00000226212.2	ENSMUSG00000115166.2	Vmn2r-ps110	chr14	transcribed_unprocessed_pseudogene	vomeronasal 2, receptor, pseudogene 110
chr14	51614842	51617548	+	51614842	51617855	A3SS	0.33	50	50	ENSMUST00000226212.2	ENSMUSG00000115166.2	Vmn2r-ps110	chr14	transcribed_unprocessed_pseudogene	vomeronasal 2, receptor, pseudogene 110
chr14	51614842	51669170	+	51614842	51617548	3pMXE	0.33	50	50	ENSMUST00000228290.2	ENSMUSG00000115166.2	Vmn2r-ps110	chr14	transcribed_unprocessed_pseudogene	vomeronasal 2, receptor, pseudogene 110
chr14	51666321	51669170	+	51614842	51669170	A5SS	0.5	50	50	ENSMUST00000161565.3	ENSMUSG00000089761.4	Vmn2r-ps111	chr14	lncRNA	vomeronasal 2, receptor, pseudogene 111
chr14	51651980	51654162	+	51651980;51653020	51652796;51654162	ES	0.33	50	50	ENSMUST00000159674.4	ENSMUSG00000000606.19	Vmn2r88	chr14	protein_coding	vomeronasal 2, receptor 88
chr14	51653020	51655435	+	51653020;51654285	51654162;51655435	ES	0.33	50	50	ENSMUST00000159674.4	ENSMUSG00000000606.19	Vmn2r88	chr14	protein_coding	vomeronasal 2, receptor 88
chr14	51651980	51655432	+	51651980	51652796	A3SS&ES	0.25	50	50	ENSMUST00000159674.4	ENSMUSG00000000606.19	Vmn2r88	chr14	protein_coding	vomeronasal 2, receptor 88
chr14	51653020	51655432	+	51653020	51654162	A3SS&ES	0.33	50	50	ENSMUST00000159674.4	ENSMUSG00000000606.19	Vmn2r88	chr14	protein_coding	vomeronasal 2, receptor 88
chr14	51654285	51655432	+	51654285	51655435	A3SS	0.5	50	50	ENSMUST00000159674.4	ENSMUSG00000000606.19	Vmn2r88	chr14	protein_coding	vomeronasal 2, receptor 88
chr14	51650801	51651177	+	51650777	51651177	A5SS	0.5	50	50	ENSMUST00000159674.4	ENSMUSG00000000606.19	Vmn2r88	chr14	protein_coding	vomeronasal 2, receptor 88
chr14	51653023	51654162	+	51653020	51654162	A5SS	0.33	50	50	ENSMUST00000159674.4	ENSMUSG00000000606.19	Vmn2r88	chr14	protein_coding	vomeronasal 2, receptor 88
chr14	51651980;51653020	51652796;51655432	+	51651980	51655432	cassetteExon	0.5	100	100	ENSMUST00000163019.9	ENSMUSG00000000606.19	Vmn2r88	chr14	protein_coding	vomeronasal 2, receptor 88
chr14	51651980;51654285	51654162;51655432	+	51651980	51655432	cassetteExon	0.5	100	100	ENSMUST00000163019.9	ENSMUSG00000000606.19	Vmn2r88	chr14	protein_coding	vomeronasal 2, receptor 88
chr14	51651980	51655435	+	51651980	51655432	A3SS	0.25	50	50	ENSMUST00000163019.9	ENSMUSG00000000606.19	Vmn2r88	chr14	protein_coding	vomeronasal 2, receptor 88
chr14	51653020	51655432	+	51653020;51654285	51654162;51655432	ES	0.33	50	50	ENSMUST00000233394.2	ENSMUSG00000000606.19	Vmn2r88	chr14	protein_coding	vomeronasal 2, receptor 88
chr14	51651980	51655435	+	51651980	51652796	A3SS&ES	0.25	50	50	ENSMUST00000233394.2	ENSMUSG00000000606.19	Vmn2r88	chr14	protein_coding	vomeronasal 2, receptor 88
chr14	51653020	51655435	+	51653020	51654162	A3SS&ES	0.33	50	50	ENSMUST00000233394.2	ENSMUSG00000000606.19	Vmn2r88	chr14	protein_coding	vomeronasal 2, receptor 88
chr14	51651980	51655435	+	51651980;51654285	51654162;51655435	ES	0.33	50	50	ENSMUST00000232951.2	ENSMUSG00000000606.19	Vmn2r88	chr14	protein_coding	vomeronasal 2, receptor 88
chr14	51651980;51653020	51652796;51655435	+	51651980;51654285	51654162;51655435	MXE	0.5	100	100	ENSMUST00000232951.2	ENSMUSG00000000606.19	Vmn2r88	chr14	protein_coding	vomeronasal 2, receptor 88
chr14	51651980;51653023	51652796;51654162	+	51651980	51654162	cassetteExon	0.5	100	100	ENSMUST00000232951.2	ENSMUSG00000000606.19	Vmn2r88	chr14	protein_coding	vomeronasal 2, receptor 88
chr14	51651980	51655432	+	51651980	51654162	A3SS&ES	0.25	50	50	ENSMUST00000232951.2	ENSMUSG00000000606.19	Vmn2r88	chr14	protein_coding	vomeronasal 2, receptor 88
chr14	51651980	51655435	+	51651980;51653020	51652796;51655435	ES	0.33	50	50	ENSMUST00000232797.2	ENSMUSG00000000606.19	Vmn2r88	chr14	protein_coding	vomeronasal 2, receptor 88
chr14	51653020	51655432	+	51653020	51655435	A3SS	0.33	50	50	ENSMUST00000232797.2	ENSMUSG00000000606.19	Vmn2r88	chr14	protein_coding	vomeronasal 2, receptor 88
chr14	51653020	51655432	+	51654285	51655432	A5SS&ES	0.33	50	50	ENSMUST00000233280.2	ENSMUSG00000000606.19	Vmn2r88	chr14	protein_coding	vomeronasal 2, receptor 88
chr14	51651980;51653020	51652796;51655432	+	51651980;51654285	51654162;51655432	MXE	0.5	100	100	ENSMUST00000233920.2	ENSMUSG00000000606.19	Vmn2r88	chr14	protein_coding	vomeronasal 2, receptor 88
chr14	51651980	51655435	+	51651980	51654162	A3SS&ES	0.25	50	50	ENSMUST00000233920.2	ENSMUSG00000000606.19	Vmn2r88	chr14	protein_coding	vomeronasal 2, receptor 88
chr14	51666321	51669170	+	51666321	51668863	A3SS	0.5	50	50	ENSMUST00000226341.2	ENSMUSG00000115374.2	Vmn2r-ps111	chr14	transcribed_unprocessed_pseudogene	vomeronasal 2, receptor, pseudogene 111
chr14	51689704	51693141	+	51689704;51692687	51692405;51693141	ES	0.5	50	50	ENSMUST00000239412.2	ENSMUSG00000070448.14	Vmn2r89	chr14	polymorphic_pseudogene	vomeronasal 2, receptor 89
chr14	51695039	51697407	+	51695039;51696272	51696149;51697407	ES	0.33	50	50	ENSMUST00000239412.2	ENSMUSG00000070448.14	Vmn2r89	chr14	polymorphic_pseudogene	vomeronasal 2, receptor 89
chr14	51689704	51690506	+	51689704	51692405	A3SS	0.33	50	50	ENSMUST00000239412.2	ENSMUSG00000070448.14	Vmn2r89	chr14	polymorphic_pseudogene	vomeronasal 2, receptor 89
chr14	51693944	51697404	+	51693944	51694815	A3SS&ES	0.33	50	50	ENSMUST00000239412.2	ENSMUSG00000070448.14	Vmn2r89	chr14	polymorphic_pseudogene	vomeronasal 2, receptor 89
chr14	51691232	51692405	+	51689704	51692405	A5SS	0.5	50	50	ENSMUST00000239412.2	ENSMUSG00000070448.14	Vmn2r89	chr14	polymorphic_pseudogene	vomeronasal 2, receptor 89
chr14	51689704	51690506	+	51689704	51693141	A3SS	0.33	50	50	ENSMUST00000161670.3	ENSMUSG00000070448.14	Vmn2r89	chr14	polymorphic_pseudogene	vomeronasal 2, receptor 89
chr14	51693944	51697407	+	51693944	51697404	A3SS	0.33	50	50	ENSMUST00000161670.3	ENSMUSG00000070448.14	Vmn2r89	chr14	polymorphic_pseudogene	vomeronasal 2, receptor 89
chr14	51693944	51697407	+	51693944	51694815	A3SS	0.33	50	50	ENSMUST00000232790.2	ENSMUSG00000070448.14	Vmn2r89	chr14	polymorphic_pseudogene	vomeronasal 2, receptor 89
chr14	51689704	51692405	+	51689704;51691232	51690506;51692405	ES	0.5	50	50	ENSMUST00000233023.2	ENSMUSG00000070448.14	Vmn2r89	chr14	polymorphic_pseudogene	vomeronasal 2, receptor 89
chr14	51693944	51697407	+	51693944;51695039	51694815;51697407	ES	0.33	50	50	ENSMUST00000233023.2	ENSMUSG00000070448.14	Vmn2r89	chr14	polymorphic_pseudogene	vomeronasal 2, receptor 89
chr14	51696272	51697407	+	51693944	51697407	A5SS	0.33	50	50	ENSMUST00000159734.4	ENSMUSG00000070448.14	Vmn2r89	chr14	polymorphic_pseudogene	vomeronasal 2, receptor 89
chr14	51870786;51871287	51871201;51871928	-	51870786	51871928	cassetteExon	0.5	100	100	ENSMUST00000170249.2	ENSMUSG00000091296.3	Gm4181	chr14	protein_coding	predicted gene 4181
chr14	52126293	52126985	+	52126293;52126674	52126604;52126985	ES	0.33	50	50	ENSMUST00000047899.13	ENSMUSG00000004561.15	Mettl17	chr14	protein_coding	methyltransferase like 17
chr14	52122761	52122861	+	52122761	52122845	A3SS	0.5	50	50	ENSMUST00000047899.13	ENSMUSG00000004561.15	Mettl17	chr14	protein_coding	methyltransferase like 17
chr14	52122979	52124268	+	52122979	52124355	A3SS	0.5	50	50	ENSMUST00000047899.13	ENSMUSG00000004561.15	Mettl17	chr14	protein_coding	methyltransferase like 17
chr14	52126854	52126985	+	52126674	52126985	A5SS	0.33	50	50	ENSMUST00000047899.13	ENSMUSG00000004561.15	Mettl17	chr14	protein_coding	methyltransferase like 17
chr14	52129004	52129084	+	52129008	52129084	A5SS	0.5	50	50	ENSMUST00000047899.13	ENSMUSG00000004561.15	Mettl17	chr14	protein_coding	methyltransferase like 17
chr14	52126293	52126985	+	52126293;52126854	52126604;52126985	ES	0.33	50	50	ENSMUST00000168413.8	ENSMUSG00000004561.15	Mettl17	chr14	protein_coding	methyltransferase like 17
chr14	52126293	52126985	+	52126293	52126604	3pMXE	0.5	50	50	ENSMUST00000169019.8	ENSMUSG00000004561.15	Mettl17	chr14	protein_coding	methyltransferase like 17
chr14	52148242	52148923	-	52148242;52148584	52148543;52148923	ES	0.5	50	50	ENSMUST00000004673.15	ENSMUSG00000004558.16	Ndrg2	chr14	protein_coding	N-myc downstream regulated gene 2
chr14	52149003	52150933	-	52149003	52150780	5pMXE	0.2	50	50	ENSMUST00000004673.15	ENSMUSG00000004558.16	Ndrg2	chr14	protein_coding	N-myc downstream regulated gene 2
chr14	52149003	52151381	-	52149003	52150780	5pMXE	0.2	50	50	ENSMUST00000004673.15	ENSMUSG00000004558.16	Ndrg2	chr14	protein_coding	N-myc downstream regulated gene 2
chr14	52146391	52147622	-	52146391	52147515	A5SS&ES	0.5	50	50	ENSMUST00000004673.15	ENSMUSG00000004558.16	Ndrg2	chr14	protein_coding	N-myc downstream regulated gene 2
chr14	52149003	52149412	-	52149003	52150780	A5SS	0.2	50	50	ENSMUST00000004673.15	ENSMUSG00000004558.16	Ndrg2	chr14	protein_coding	N-myc downstream regulated gene 2
chr14	52149003	52150051	-	52149003	52150780	A5SS	0.2	50	50	ENSMUST00000004673.15	ENSMUSG00000004558.16	Ndrg2	chr14	protein_coding	N-myc downstream regulated gene 2
chr14	52149003	52149412	-	52149003	52151381	A5SS	0.2	50	50	ENSMUST00000227237.2	ENSMUSG00000004558.16	Ndrg2	chr14	protein_coding	N-myc downstream regulated gene 2
chr14	52149003	52150051	-	52149003	52151381	A5SS	0.2	50	50	ENSMUST00000227237.2	ENSMUSG00000004558.16	Ndrg2	chr14	protein_coding	N-myc downstream regulated gene 2
chr14	52149003	52150933	-	52149003	52151381	A5SS	0.2	50	50	ENSMUST00000227237.2	ENSMUSG00000004558.16	Ndrg2	chr14	protein_coding	N-myc downstream regulated gene 2
chr14	52149003	52149412	-	52149003	52150933	A5SS	0.2	50	50	ENSMUST00000228164.2	ENSMUSG00000004558.16	Ndrg2	chr14	protein_coding	N-myc downstream regulated gene 2
chr14	52149003	52150051	-	52149003	52150933	A5SS	0.2	50	50	ENSMUST00000228164.2	ENSMUSG00000004558.16	Ndrg2	chr14	protein_coding	N-myc downstream regulated gene 2
chr14	52149003	52150051	-	52149003	52149412	5pMXE	0.2	50	50	ENSMUST00000226528.2	ENSMUSG00000004558.16	Ndrg2	chr14	protein_coding	N-myc downstream regulated gene 2
chr14	52222883	52224860	+	52222883;52224679	52224389;52224860	ES	0.33	50	50	ENSMUST00000182649.8	ENSMUSG00000004562.17	Arhgef40	chr14	protein_coding	Rho guanine nucleotide exchange factor (GEF) 40
chr14	52222448	52224573	+	52222448	52222762	A3SS&ES	0.33	50	50	ENSMUST00000182649.8	ENSMUSG00000004562.17	Arhgef40	chr14	protein_coding	Rho guanine nucleotide exchange factor (GEF) 40
chr14	52242199	52242446	+	52242199;52242356	52242336;52242446	ES	0.5	50	50	ENSMUST00000182905.8	ENSMUSG00000004562.17	Arhgef40	chr14	protein_coding	Rho guanine nucleotide exchange factor (GEF) 40
chr14	52222448;52222883	52222762;52224860	+	52222448	52224860	cassetteExon	0.5	100	100	ENSMUST00000182905.8	ENSMUSG00000004562.17	Arhgef40	chr14	protein_coding	Rho guanine nucleotide exchange factor (GEF) 40
chr14	52222448;52224679	52224573;52224860	+	52222448	52224860	cassetteExon	0.5	100	100	ENSMUST00000182905.8	ENSMUSG00000004562.17	Arhgef40	chr14	protein_coding	Rho guanine nucleotide exchange factor (GEF) 40
chr14	52239919;52241215	52241111;52241430	+	52239919	52241430	cassetteExon	0.5	100	100	ENSMUST00000182905.8	ENSMUSG00000004562.17	Arhgef40	chr14	protein_coding	Rho guanine nucleotide exchange factor (GEF) 40
chr14	52239919;52241215	52241111;52242069	+	52239919;52241573	52241430;52242069	MXE	0.5	100	100	ENSMUST00000182905.8	ENSMUSG00000004562.17	Arhgef40	chr14	protein_coding	Rho guanine nucleotide exchange factor (GEF) 40
chr14	52227672	52228339	+	52227672	52228361	A3SS	0.5	50	50	ENSMUST00000182905.8	ENSMUSG00000004562.17	Arhgef40	chr14	protein_coding	Rho guanine nucleotide exchange factor (GEF) 40
chr14	52229154	52229242	+	52229154	52229269	A3SS	0.5	50	50	ENSMUST00000182905.8	ENSMUSG00000004562.17	Arhgef40	chr14	protein_coding	Rho guanine nucleotide exchange factor (GEF) 40
chr14	52229587	52231152	+	52229587	52231551	A3SS	0.5	50	50	ENSMUST00000182905.8	ENSMUSG00000004562.17	Arhgef40	chr14	protein_coding	Rho guanine nucleotide exchange factor (GEF) 40
chr14	52241573	52242057	+	52241573	52242069	A3SS	0.5	50	50	ENSMUST00000182905.8	ENSMUSG00000004562.17	Arhgef40	chr14	protein_coding	Rho guanine nucleotide exchange factor (GEF) 40
chr14	52242492	52242798	+	52242492	52242616	A3SS	0.5	50	50	ENSMUST00000182905.8	ENSMUSG00000004562.17	Arhgef40	chr14	protein_coding	Rho guanine nucleotide exchange factor (GEF) 40
chr14	52227206	52227505	+	52227395	52227505	A5SS	0.5	50	50	ENSMUST00000182905.8	ENSMUSG00000004562.17	Arhgef40	chr14	protein_coding	Rho guanine nucleotide exchange factor (GEF) 40
chr14	52231864	52232337	+	52231855	52232337	A5SS	0.5	50	50	ENSMUST00000182905.8	ENSMUSG00000004562.17	Arhgef40	chr14	protein_coding	Rho guanine nucleotide exchange factor (GEF) 40
chr14	52235304	52235601	+	52235496	52235601	A5SS	0.5	50	50	ENSMUST00000182905.8	ENSMUSG00000004562.17	Arhgef40	chr14	protein_coding	Rho guanine nucleotide exchange factor (GEF) 40
chr14	52241215	52242069	+	52241215;52241573	52241430;52242069	ES	0.5	50	50	ENSMUST00000093813.12	ENSMUSG00000004562.17	Arhgef40	chr14	protein_coding	Rho guanine nucleotide exchange factor (GEF) 40
chr14	52222448	52224860	+	52222448	52222762	3pMXE	0.33	50	50	ENSMUST00000182609.2	ENSMUSG00000004562.17	Arhgef40	chr14	protein_coding	Rho guanine nucleotide exchange factor (GEF) 40
chr14	52222448;52224679	52224573;52224860	+	52222448;52222883	52222762;52224860	MXE	0.5	100	100	ENSMUST00000182338.2	ENSMUSG00000004562.17	Arhgef40	chr14	protein_coding	Rho guanine nucleotide exchange factor (GEF) 40
chr14	52242199	52242446	+	52242199	52242336	A3SS	0.5	50	50	ENSMUST00000182644.8	ENSMUSG00000004562.17	Arhgef40	chr14	protein_coding	Rho guanine nucleotide exchange factor (GEF) 40
chr14	52241215	52242069	+	52241215	52241430	A3SS&ES	0.5	50	50	ENSMUST00000182667.8	ENSMUSG00000004562.17	Arhgef40	chr14	protein_coding	Rho guanine nucleotide exchange factor (GEF) 40
chr14	52239919	52241430	+	52239919	52241111	3pMXE	0.5	50	50	ENSMUST00000183022.2	ENSMUSG00000004562.17	Arhgef40	chr14	protein_coding	Rho guanine nucleotide exchange factor (GEF) 40
chr14	52241215	52242069	+	52241573	52242069	A5SS	0.5	50	50	ENSMUST00000182931.2	ENSMUSG00000004562.17	Arhgef40	chr14	protein_coding	Rho guanine nucleotide exchange factor (GEF) 40
chr14	52247515	52252308	-	52247515	52251963	5pMXE	0.12	50	50	ENSMUST00000226522.2	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515	52252405	-	52247515	52251963	5pMXE	0.12	50	50	ENSMUST00000226522.2	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515	52256952	-	52247515	52251963	5pMXE	0.12	50	50	ENSMUST00000226522.2	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515	52257648	-	52247515	52251963	5pMXE	0.12	50	50	ENSMUST00000226522.2	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515	52257980	-	52247515	52251963	5pMXE	0.12	50	50	ENSMUST00000226522.2	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515	52247820	-	52247515	52251963	A5SS	0.12	50	50	ENSMUST00000226522.2	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515	52248239	-	52247515	52251963	A5SS	0.12	50	50	ENSMUST00000226522.2	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247119;52247515	52247427;52257980	-	52247119	52257980	cassetteExon	0.5	100	100	ENSMUST00000228580.2	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52257831	52257980	-	52247119	52257980	A3SS	0.33	50	50	ENSMUST00000228580.2	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515;52257831	52257648;52257980	-	52247515	52257980	cassetteExon	0.5	100	100	ENSMUST00000067549.15	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515	52247820	-	52247515	52257980	A5SS	0.12	50	50	ENSMUST00000067549.15	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515	52248239	-	52247515	52257980	A5SS	0.12	50	50	ENSMUST00000067549.15	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515	52252308	-	52247515	52257980	A5SS	0.12	50	50	ENSMUST00000067549.15	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515	52252405	-	52247515	52257980	A5SS	0.12	50	50	ENSMUST00000067549.15	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515	52256952	-	52247515	52257980	A5SS	0.12	50	50	ENSMUST00000067549.15	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515	52256952	-	52247515;52252509	52252405;52256952	ES	0.5	50	50	ENSMUST00000166169.4	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52252509	52257205	-	52252509	52256952	5pMXE	0.5	50	50	ENSMUST00000166169.4	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515	52247820	-	52247515	52252405	A5SS	0.16	50	50	ENSMUST00000166169.4	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515	52248239	-	52247515	52252405	A5SS	0.16	50	50	ENSMUST00000166169.4	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515	52252308	-	52247515	52252405	A5SS	0.16	50	50	ENSMUST00000166169.4	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515	52252308	-	52247515	52248239	5pMXE	0.12	50	50	ENSMUST00000226964.2	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515	52256952	-	52247515	52248239	5pMXE	0.12	50	50	ENSMUST00000226964.2	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515	52257648	-	52247515	52248239	5pMXE	0.12	50	50	ENSMUST00000226964.2	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515	52247820	-	52247515	52248239	A5SS	0.12	50	50	ENSMUST00000226964.2	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515	52252308	-	52247515	52247820	5pMXE	0.12	50	50	ENSMUST00000228747.2	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515	52256952	-	52247515	52247820	5pMXE	0.12	50	50	ENSMUST00000228747.2	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515	52257648	-	52247515	52247820	5pMXE	0.12	50	50	ENSMUST00000228747.2	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515	52256952	-	52247515	52252405	5pMXE	0.12	50	50	ENSMUST00000226527.2	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515	52257648	-	52247515	52252405	5pMXE	0.12	50	50	ENSMUST00000226527.2	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515	52257648	-	52247515	52256952	5pMXE	0.12	50	50	ENSMUST00000226605.2	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515;52252509	52252308;52256952	-	52247515	52256952	cassetteExon	0.5	100	100	ENSMUST00000226605.2	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515	52256952	-	52247515	52252308	5pMXE	0.12	50	50	ENSMUST00000228051.2	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515	52257648	-	52247515	52252308	5pMXE	0.12	50	50	ENSMUST00000228051.2	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515;52252725	52252308;52257648	-	52247515	52257648	cassetteExon	0.5	100	100	ENSMUST00000226554.2	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515;52252725	52252405;52257648	-	52247515	52257648	cassetteExon	0.5	100	100	ENSMUST00000226554.2	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52247515	52257648	-	52252725	52257648	3pMXE	0.5	50	50	ENSMUST00000227420.2	ENSMUSG00000049295.18	Zfp219	chr14	protein_coding	zinc finger protein 219
chr14	52255467	52255999	+	52255467	52256110	A3SS	0.5	50	50	ENSMUST00000227295.2	ENSMUSG00000072571.4	Tmem253	chr14	protein_coding	transmembrane protein 253
chr14	52275874	52277175	-	52275910	52277175	A3SS	0.5	50	50	ENSMUST00000216907.2	ENSMUSG00000044286.7	Olfr221	chr14	protein_coding	olfactory receptor 221
chr14	52275910	52276992	-	52275910	52277175	A5SS	0.5	50	50	ENSMUST00000216907.2	ENSMUSG00000044286.7	Olfr221	chr14	protein_coding	olfactory receptor 221
chr14	52275874	52279863	-	52275874	52277175	5pMXE	0.5	50	50	ENSMUST00000216188.2	ENSMUSG00000044286.7	Olfr221	chr14	protein_coding	olfactory receptor 221
chr14	52321848	52341346	-	52321848;52335497	52335472;52341346	ES	0.25	50	50	ENSMUST00000111610.12	ENSMUSG00000060373.16	Hnrnpc	chr14	protein_coding	heterogeneous nuclear ribonucleoprotein C
chr14	52335497;52336001	52335773;52341346	-	52335497	52341346	cassetteExon	0.5	100	100	ENSMUST00000111610.12	ENSMUSG00000060373.16	Hnrnpc	chr14	protein_coding	heterogeneous nuclear ribonucleoprotein C
chr14	52312869	52313070	-	52312893	52313070	A3SS	0.33	50	50	ENSMUST00000111610.12	ENSMUSG00000060373.16	Hnrnpc	chr14	protein_coding	heterogeneous nuclear ribonucleoprotein C
chr14	52312872	52313070	-	52312893	52313070	A3SS	0.33	50	50	ENSMUST00000111610.12	ENSMUSG00000060373.16	Hnrnpc	chr14	protein_coding	heterogeneous nuclear ribonucleoprotein C
chr14	52321873	52341346	-	52335497	52341346	A3SS&ES	0.25	50	50	ENSMUST00000111610.12	ENSMUSG00000060373.16	Hnrnpc	chr14	protein_coding	heterogeneous nuclear ribonucleoprotein C
chr14	52318764	52319285	-	52318764	52319246	A5SS	0.5	50	50	ENSMUST00000111610.12	ENSMUSG00000060373.16	Hnrnpc	chr14	protein_coding	heterogeneous nuclear ribonucleoprotein C
chr14	52321848	52334772	-	52321848	52335472	A5SS	0.25	50	50	ENSMUST00000111610.12	ENSMUSG00000060373.16	Hnrnpc	chr14	protein_coding	heterogeneous nuclear ribonucleoprotein C
chr14	52321848	52334779	-	52321848	52335472	A5SS	0.25	50	50	ENSMUST00000111610.12	ENSMUSG00000060373.16	Hnrnpc	chr14	protein_coding	heterogeneous nuclear ribonucleoprotein C
chr14	52321848	52341346	-	52321873	52341346	A3SS	0.25	50	50	ENSMUST00000164655.2	ENSMUSG00000060373.16	Hnrnpc	chr14	protein_coding	heterogeneous nuclear ribonucleoprotein C
chr14	52336001	52341346	-	52321873	52341346	A3SS	0.25	50	50	ENSMUST00000164655.2	ENSMUSG00000060373.16	Hnrnpc	chr14	protein_coding	heterogeneous nuclear ribonucleoprotein C
chr14	52312869	52313070	-	52312872	52313070	A3SS	0.33	50	50	ENSMUST00000228198.2	ENSMUSG00000060373.16	Hnrnpc	chr14	protein_coding	heterogeneous nuclear ribonucleoprotein C
chr14	52336001	52341346	-	52321848	52341346	A3SS	0.25	50	50	ENSMUST00000227536.2	ENSMUSG00000060373.16	Hnrnpc	chr14	protein_coding	heterogeneous nuclear ribonucleoprotein C
chr14	52321848	52334772	-	52321848	52341346	A5SS	0.25	50	50	ENSMUST00000227536.2	ENSMUSG00000060373.16	Hnrnpc	chr14	protein_coding	heterogeneous nuclear ribonucleoprotein C
chr14	52321848	52334779	-	52321848	52341346	A5SS	0.25	50	50	ENSMUST00000227536.2	ENSMUSG00000060373.16	Hnrnpc	chr14	protein_coding	heterogeneous nuclear ribonucleoprotein C
chr14	52321848	52341346	-	52321848;52336001	52334779;52341346	ES	0.25	50	50	ENSMUST00000228232.2	ENSMUSG00000060373.16	Hnrnpc	chr14	protein_coding	heterogeneous nuclear ribonucleoprotein C
chr14	52335497	52341346	-	52336001	52341346	A3SS	0.25	50	50	ENSMUST00000228232.2	ENSMUSG00000060373.16	Hnrnpc	chr14	protein_coding	heterogeneous nuclear ribonucleoprotein C
chr14	52321848	52334772	-	52321848	52334779	A5SS	0.25	50	50	ENSMUST00000228232.2	ENSMUSG00000060373.16	Hnrnpc	chr14	protein_coding	heterogeneous nuclear ribonucleoprotein C
chr14	52321848	52341346	-	52321848;52336001	52335472;52341346	ES	0.25	50	50	ENSMUST00000228815.2	ENSMUSG00000060373.16	Hnrnpc	chr14	protein_coding	heterogeneous nuclear ribonucleoprotein C
chr14	52321848	52341346	-	52335497	52341346	3pMXE	0.25	50	50	ENSMUST00000228786.2	ENSMUSG00000060373.16	Hnrnpc	chr14	protein_coding	heterogeneous nuclear ribonucleoprotein C
chr14	52383340	52386673	+	52383340;52385009	52384667;52386673	ES	0.2	50	50	ENSMUST00000111603.10	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52387088	52387815	+	52387088;52387548	52387345;52387815	ES	0.5	50	50	ENSMUST00000111603.10	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52366994	52368748	+	52366994	52368616	A3SS	0.5	50	50	ENSMUST00000111603.10	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52371316	52374083	+	52371316	52374115	A3SS	0.5	50	50	ENSMUST00000111603.10	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52374275	52376199	+	52374275	52376196	A3SS	0.5	50	50	ENSMUST00000111603.10	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52387950	52389523	+	52387950	52389660	A3SS	0.33	50	50	ENSMUST00000111603.10	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52387950	52389672	+	52387950	52389660	A3SS	0.33	50	50	ENSMUST00000111603.10	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52356535	52356653	+	52352240	52356653	A5SS	0.5	50	50	ENSMUST00000111603.10	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52368889	52371243	+	52368762	52371243	A5SS	0.5	50	50	ENSMUST00000111603.10	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52378697	52382490	+	52378730	52382490	A5SS	0.33	50	50	ENSMUST00000111603.10	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52378697	52383189	+	52382942	52383189	A5SS&ES	0.5	50	50	ENSMUST00000111603.10	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52378697	52386673	+	52385009	52386673	A5SS&ES	0.2	50	50	ENSMUST00000111603.10	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52379036	52382490	+	52378730	52382490	A5SS	0.33	50	50	ENSMUST00000111603.10	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52378697	52382490	+	52378697;52379036	52378899;52382490	ES	0.33	50	50	ENSMUST00000180646.8	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52387950	52389672	+	52387950	52389523	A3SS	0.33	50	50	ENSMUST00000180646.8	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52378730	52386673	+	52385009	52386673	A5SS&ES	0.2	50	50	ENSMUST00000180646.8	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52382942	52386673	+	52385009	52386673	A5SS&ES	0.2	50	50	ENSMUST00000181823.9	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52378697;52382942	52382490;52383189	+	52378697	52383189	cassetteExon	0.5	100	100	ENSMUST00000111600.11	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52378697;52382942	52382490;52386673	+	52378697;52385009	52383189;52386673	MXE	0.5	100	100	ENSMUST00000111600.11	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52378697	52378899	+	52378697	52383189	A3SS	0.25	50	50	ENSMUST00000111600.11	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52378697;52382942	52382490;52386673	+	52378697	52386673	cassetteExon	0.5	100	100	ENSMUST00000181297.8	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52378697;52383340	52383189;52386673	+	52378697	52386673	cassetteExon	0.5	100	100	ENSMUST00000181297.8	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52378697	52378899	+	52378697	52386673	A3SS	0.25	50	50	ENSMUST00000181297.8	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52378730	52386673	+	52378697	52386673	A5SS	0.2	50	50	ENSMUST00000181297.8	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52378730;52382942	52382490;52386673	+	52378730	52386673	cassetteExon	0.5	100	100	ENSMUST00000180901.8	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52383340	52386673	+	52378730	52386673	A5SS	0.2	50	50	ENSMUST00000180901.8	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52378697	52386673	+	52382942	52386673	5pMXE	0.2	50	50	ENSMUST00000180513.2	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52378730	52386673	+	52382942	52386673	5pMXE	0.2	50	50	ENSMUST00000180513.2	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52382942;52383340	52383189;52386673	+	52382942	52386673	cassetteExon	0.5	100	100	ENSMUST00000180513.2	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52383340	52386673	+	52385009	52386673	5pMXE	0.2	50	50	ENSMUST00000180388.2	ENSMUSG00000057132.17	Rpgrip1	chr14	protein_coding	retinitis pigmentosa GTPase regulator interacting protein 1
chr14	52442452	52450320	+	52442452;52443216	52443150;52450320	ES	0.5	50	50	ENSMUST00000180857.2	ENSMUSG00000097533.3	Gm26590	chr14	lncRNA	predicted gene, 26590
chr14	52439747	52442283	+	52435008	52442283	A5SS	0.5	50	50	ENSMUST00000180857.2	ENSMUSG00000097533.3	Gm26590	chr14	lncRNA	predicted gene, 26590
chr14	52439204	52439961	-	52439204;52439780	52439601;52439961	ES	0.5	50	50	ENSMUST00000089752.11	ENSMUSG00000053754.15	Chd8	chr14	protein_coding	chromodomain helicase DNA binding protein 8
chr14	52460076;52462007	52461977;52462083	-	52460076	52462083	cassetteExon	0.5	100	100	ENSMUST00000089752.11	ENSMUSG00000053754.15	Chd8	chr14	protein_coding	chromodomain helicase DNA binding protein 8
chr14	52450200	52450281	-	52450176	52450281	A3SS	0.5	50	50	ENSMUST00000089752.11	ENSMUSG00000053754.15	Chd8	chr14	protein_coding	chromodomain helicase DNA binding protein 8
chr14	52475245	52481890	-	52475245	52495135	A5SS	0.5	50	50	ENSMUST00000200169.6	ENSMUSG00000053754.15	Chd8	chr14	protein_coding	chromodomain helicase DNA binding protein 8
chr14	52501274	52503647	-	52501274;52502224	52502156;52503647	ES	0.5	50	50	ENSMUST00000022765.14	ENSMUSG00000022159.17	Rab2b	chr14	protein_coding	RAB2B, member RAS oncogene family
chr14	52506191	52512900	-	52506191;52506457	52506375;52512900	ES	0.25	50	50	ENSMUST00000022765.14	ENSMUSG00000022159.17	Rab2b	chr14	protein_coding	RAB2B, member RAS oncogene family
chr14	52506413	52512900	-	52506457	52512900	A3SS	0.25	50	50	ENSMUST00000022765.14	ENSMUSG00000022159.17	Rab2b	chr14	protein_coding	RAB2B, member RAS oncogene family
chr14	52512967	52516045	-	52512967	52516371	A5SS	0.5	50	50	ENSMUST00000022765.14	ENSMUSG00000022159.17	Rab2b	chr14	protein_coding	RAB2B, member RAS oncogene family
chr14	52503758	52512900	-	52503758	52506099	5pMXE	0.5	50	50	ENSMUST00000174585.8	ENSMUSG00000022159.17	Rab2b	chr14	protein_coding	RAB2B, member RAS oncogene family
chr14	52501274	52503647	-	52502224	52503647	A3SS	0.5	50	50	ENSMUST00000174585.8	ENSMUSG00000022159.17	Rab2b	chr14	protein_coding	RAB2B, member RAS oncogene family
chr14	52506191	52512900	-	52506191;52506413	52506375;52512900	ES	0.25	50	50	ENSMUST00000173046.8	ENSMUSG00000022159.17	Rab2b	chr14	protein_coding	RAB2B, member RAS oncogene family
chr14	52503758;52506191	52506099;52512900	-	52503758	52512900	cassetteExon	0.5	100	100	ENSMUST00000172488.8	ENSMUSG00000022159.17	Rab2b	chr14	protein_coding	RAB2B, member RAS oncogene family
chr14	52503758;52506413	52506099;52512900	-	52503758	52512900	cassetteExon	0.5	100	100	ENSMUST00000172488.8	ENSMUSG00000022159.17	Rab2b	chr14	protein_coding	RAB2B, member RAS oncogene family
chr14	52503758;52506457	52506099;52512900	-	52503758	52512900	cassetteExon	0.5	100	100	ENSMUST00000172488.8	ENSMUSG00000022159.17	Rab2b	chr14	protein_coding	RAB2B, member RAS oncogene family
chr14	52523623	52524186	+	52523359	52524186	A5SS	0.5	50	50	ENSMUST00000022766.8	ENSMUSG00000016831.13	Tox4	chr14	protein_coding	TOX high mobility group box family member 4
chr14	52532550	52533973	-	52532550;52533643	52533531;52533973	ES	0.5	50	50	ENSMUST00000022767.16	ENSMUSG00000022160.19	Mettl3	chr14	protein_coding	methyltransferase like 3
chr14	52533643	52534121	-	52533643;52534038	52533973;52534121	ES	0.5	50	50	ENSMUST00000022767.16	ENSMUSG00000022160.19	Mettl3	chr14	protein_coding	methyltransferase like 3
chr14	52534414	52535326	-	52534414;52535115	52534928;52535326	ES	0.5	50	50	ENSMUST00000022767.16	ENSMUSG00000022160.19	Mettl3	chr14	protein_coding	methyltransferase like 3
chr14	52535542	52537158	-	52535542;52536272	52536097;52537158	ES	0.33	50	50	ENSMUST00000022767.16	ENSMUSG00000022160.19	Mettl3	chr14	protein_coding	methyltransferase like 3
chr14	52537858;52538825	52538754;52542345	-	52537858	52542345	cassetteExon	0.5	100	100	ENSMUST00000022767.16	ENSMUSG00000022160.19	Mettl3	chr14	protein_coding	methyltransferase like 3
chr14	52536193	52537158	-	52536272	52537158	A3SS	0.33	50	50	ENSMUST00000022767.16	ENSMUSG00000022160.19	Mettl3	chr14	protein_coding	methyltransferase like 3
chr14	52537562	52542340	-	52537562	52537641	A5SS&ES	0.5	50	50	ENSMUST00000022767.16	ENSMUSG00000022160.19	Mettl3	chr14	protein_coding	methyltransferase like 3
chr14	52537858	52542340	-	52537858	52542345	A5SS	0.33	50	50	ENSMUST00000022767.16	ENSMUSG00000022160.19	Mettl3	chr14	protein_coding	methyltransferase like 3
chr14	52532550;52534038	52533973;52534121	-	52532550;52533643	52533531;52534121	MXE	0.5	100	100	ENSMUST00000174351.8	ENSMUSG00000022160.19	Mettl3	chr14	protein_coding	methyltransferase like 3
chr14	52533643	52534121	-	52533643	52533973	A5SS	0.5	50	50	ENSMUST00000173546.2	ENSMUSG00000022160.19	Mettl3	chr14	protein_coding	methyltransferase like 3
chr14	52532550	52533973	-	52533643	52533973	3pMXE	0.5	50	50	ENSMUST00000147768.8	ENSMUSG00000022160.19	Mettl3	chr14	protein_coding	methyltransferase like 3
chr14	52535542;52536193	52536097;52537158	-	52535542	52537158	cassetteExon	0.5	100	100	ENSMUST00000147768.8	ENSMUSG00000022160.19	Mettl3	chr14	protein_coding	methyltransferase like 3
chr14	52534414	52535326	-	52535115	52535326	3pMXE	0.5	50	50	ENSMUST00000127797.9	ENSMUSG00000022160.19	Mettl3	chr14	protein_coding	methyltransferase like 3
chr14	52537562	52542340	-	52537562;52537858	52537641;52542340	ES	0.5	50	50	ENSMUST00000122962.3	ENSMUSG00000022160.19	Mettl3	chr14	protein_coding	methyltransferase like 3
chr14	52537858	52538754	-	52537858	52542340	A5SS	0.33	50	50	ENSMUST00000122962.3	ENSMUSG00000022160.19	Mettl3	chr14	protein_coding	methyltransferase like 3
chr14	52553120	52565560	-	52553120	52553500	5pMXE	0.5	50	50	ENSMUST00000135523.5	ENSMUSG00000049532.12	Sall2	chr14	protein_coding	spalt like transcription factor 2
chr14	52665472	52666054	+	52665472	52666051	A3SS	0.5	50	50	ENSMUST00000103567.6	ENSMUSG00000076758.7	Trav1	chr14	TR_V_gene	T cell receptor alpha variable 1
chr14	52680633	52681383	+	52680633	52681380	A3SS	0.5	50	50	ENSMUST00000205900.3	ENSMUSG00000035626.5	Olfr1509	chr14	protein_coding	olfactory receptor 1509
chr14	52680582	52681380	+	52680633	52681380	A5SS	0.5	50	50	ENSMUST00000205900.3	ENSMUSG00000035626.5	Olfr1509	chr14	protein_coding	olfactory receptor 1509
chr14	52681552	52687851	+	52681455	52687851	A5SS	0.33	50	50	ENSMUST00000205900.3	ENSMUSG00000035626.5	Olfr1509	chr14	protein_coding	olfactory receptor 1509
chr14	52686839	52687851	+	52681455	52687851	A5SS	0.33	50	50	ENSMUST00000205900.3	ENSMUSG00000035626.5	Olfr1509	chr14	protein_coding	olfactory receptor 1509
chr14	52686839	52687851	+	52681552	52687851	A5SS	0.33	50	50	ENSMUST00000215030.2	ENSMUSG00000035626.5	Olfr1509	chr14	protein_coding	olfactory receptor 1509
chr14	52701409	52704353	-	52701476	52704353	A3SS	0.5	50	50	ENSMUST00000206520.3	ENSMUSG00000057564.7	Olfr1508	chr14	protein_coding	olfactory receptor 1508
chr14	52728219	52732586	-	52728429	52732586	A3SS	0.33	50	50	ENSMUST00000206062.4	ENSMUSG00000059887.8	Olfr1507	chr14	protein_coding	olfactory receptor 1507
chr14	52728364	52732586	-	52728429	52732586	A3SS	0.33	50	50	ENSMUST00000206062.4	ENSMUSG00000059887.8	Olfr1507	chr14	protein_coding	olfactory receptor 1507
chr14	52728429	52732654	-	52728429	52732586	A5SS	0.5	50	50	ENSMUST00000206062.4	ENSMUSG00000059887.8	Olfr1507	chr14	protein_coding	olfactory receptor 1507
chr14	52728364	52732586	-	52728219	52732586	A3SS	0.33	50	50	ENSMUST00000206069.2	ENSMUSG00000059887.8	Olfr1507	chr14	protein_coding	olfactory receptor 1507
chr14	52804789	52805224	+	52804789	52805221	A3SS	0.5	50	50	ENSMUST00000196939.2	ENSMUSG00000076759.4	Trav2	chr14	TR_V_gene	T cell receptor alpha variable 2
chr14	52990903	52991015	+	52990903	52991006	A3SS	0.5	50	50	ENSMUST00000180717.3	ENSMUSG00000095387.6	Trav6d-4	chr14	TR_V_gene	T cell receptor alpha variable 6D-4
chr14	53082062	53082207	+	53082062	53082204	A3SS	0.5	50	50	ENSMUST00000181360.3	ENSMUSG00000095689.6	Trav12d-1	chr14	TR_V_gene	T cell receptor alpha variable 12D-1
chr14	53100870	53101094	+	53100870	53101091	A3SS	0.5	50	50	ENSMUST00000103616.5	ENSMUSG00000096653.5	Trav15d-1-dv6d-1	chr14	TR_V_gene	T cell receptor alpha variable 15D-1-DV6D-1
chr14	53129688	53129785	+	53129688	53129782	A3SS	0.5	50	50	ENSMUST00000199746.5	ENSMUSG00000094914.6	Trav9d-2	chr14	TR_V_gene	T cell receptor alpha  variable 9D-2
chr14	53153417	53153595	+	53153417	53153592	A3SS	0.5	50	50	ENSMUST00000197007.2	ENSMUSG00000096129.3	Trav12d-2	chr14	TR_V_gene	T cell receptor alpha variable 12D-2
chr14	53220958	53221057	+	53220958	53221054	A3SS	0.5	50	50	ENSMUST00000200548.2	ENSMUSG00000090868.3	Trav9d-4	chr14	TR_V_gene	T cell receptor alpha variable 9D-4
chr14	53279936	53280067	+	53279936	53280064	A3SS	0.5	50	50	ENSMUST00000198439.5	ENSMUSG00000076795.7	Trav8d-2	chr14	TR_V_gene	T cell receptor alpha  variable 8D-2
chr14	53393109	53393254	+	53393109	53393251	A3SS	0.5	50	50	ENSMUST00000198682.2	ENSMUSG00000096055.3	Trav12n-1	chr14	TR_V_gene	T cell receptor alpha variable 12N-1
chr14	53411830	53412054	+	53411830	53412051	A3SS	0.5	50	50	ENSMUST00000197433.5	ENSMUSG00000094413.6	Trav15n-1	chr14	TR_V_gene	T cell receptor alpha variable 15N-1
chr14	53440624	53440721	+	53440624	53440718	A3SS	0.5	50	50	ENSMUST00000198913.5	ENSMUSG00000093813.6	Trav9n-2	chr14	TR_V_gene	T cell receptor alpha  variable 9N-2
chr14	53464391	53464569	+	53464391	53464566	A3SS	0.5	50	50	ENSMUST00000196674.2	ENSMUSG00000096531.3	Trav12n-2	chr14	TR_V_gene	T cell receptor alpha variable 12N-2
chr14	53588595	53588775	+	53588595	53588778	A3SS	0.5	50	50	ENSMUST00000199280.2	ENSMUSG00000076822.3	Trav16n	chr14	TR_V_gene	T cell receptor alpha variable 16n
chr14	53691832	53691953	+	53691832	53691944	A3SS	0.5	50	50	ENSMUST00000180711.3	ENSMUSG00000094468.6	Trav6-4	chr14	TR_V_gene	T cell receptor alpha variable 6-4
chr14	53728654	53728791	+	53728654	53728788	A3SS	0.5	50	50	ENSMUST00000181210.3	ENSMUSG00000096149.6	Trav6-5	chr14	TR_V_gene	T cell receptor alpha variable 6-5
chr14	53775768	53775904	+	53775768	53775901	A3SS	0.5	50	50	ENSMUST00000200115.2	ENSMUSG00000096825.3	Trav12-1	chr14	TR_V_gene	T cell receptor alpha variable 12-1
chr14	53797181	53797405	+	53797181	53797402	A3SS	0.5	50	50	ENSMUST00000200101.2	ENSMUSG00000094016.3	Trav15-1-dv6-1	chr14	TR_V_gene	T cell receptor alpha variable 15-1-DV6-1
chr14	54044141	54044281	+	54044141	54044278	A3SS	0.5	50	50	ENSMUST00000103672.9	ENSMUSG00000096397.8	Trav17	chr14	TR_V_gene	T cell receptor alpha variable 17
chr14	54068607	54069006	+	54068607	54069003	A3SS	0.5	50	50	ENSMUST00000103673.11	ENSMUSG00000076861.11	Trav18	chr14	TR_V_gene	T cell receptor alpha variable 18
chr14	54119120	54119393	+	54119120	54119390	A3SS	0.5	50	50	ENSMUST00000103676.9	ENSMUSG00000076864.10	Trdv1	chr14	TR_V_gene	T cell receptor delta variable 1
chr14	54183578	54183822	+	54183578	54183819	A3SS	0.5	50	50	ENSMUST00000197130.5	ENSMUSG00000076865.7	Trdv2-1	chr14	TR_V_gene	T cell receptor delta variable 2-1
chr14	54342338	54345878	-	54305238	54345878	A3SS	0.5	50	50	ENSMUST00000198124.5	ENSMUSG00000104658.5	Gm30275	chr14	lncRNA	predicted gene, 30275
chr14	54504638	54507881	+	54504638	54505225	3pMXE	0.5	50	50	ENSMUST00000180359.8	ENSMUSG00000040997.15	Abhd4	chr14	protein_coding	abhydrolase domain containing 4
chr14	54502849	54504317	+	54502849	54504452	A3SS	0.5	50	50	ENSMUST00000180359.8	ENSMUSG00000040997.15	Abhd4	chr14	protein_coding	abhydrolase domain containing 4
chr14	54496776	54499083	+	54491928	54499083	A5SS	0.33	50	50	ENSMUST00000180359.8	ENSMUSG00000040997.15	Abhd4	chr14	protein_coding	abhydrolase domain containing 4
chr14	54496883	54499083	+	54491928	54499083	A5SS	0.33	50	50	ENSMUST00000180359.8	ENSMUSG00000040997.15	Abhd4	chr14	protein_coding	abhydrolase domain containing 4
chr14	54491928	54499083	+	54491928	54502738	A3SS	0.5	50	50	ENSMUST00000199338.2	ENSMUSG00000040997.15	Abhd4	chr14	protein_coding	abhydrolase domain containing 4
chr14	54500780	54502738	+	54491928	54502738	A5SS	0.5	50	50	ENSMUST00000199338.2	ENSMUSG00000040997.15	Abhd4	chr14	protein_coding	abhydrolase domain containing 4
chr14	54496883	54499083	+	54496776	54499083	A5SS	0.33	50	50	ENSMUST00000041197.13	ENSMUSG00000040997.15	Abhd4	chr14	protein_coding	abhydrolase domain containing 4
chr14	54646505	54647535	-	54646505	54646707	5pMXE	0.12	50	50	ENSMUST00000000984.9	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54646505	54647610	-	54646505	54646707	5pMXE	0.12	50	50	ENSMUST00000000984.9	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54646505	54647997	-	54646505	54646707	5pMXE	0.12	50	50	ENSMUST00000000984.9	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54646505	54648053	-	54646505	54646707	5pMXE	0.12	50	50	ENSMUST00000000984.9	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54646505	54649042	-	54646505	54646707	5pMXE	0.12	50	50	ENSMUST00000000984.9	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54646505	54651337	-	54646505	54646707	5pMXE	0.12	50	50	ENSMUST00000000984.9	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54646505	54654046	-	54646505	54646707	5pMXE	0.12	50	50	ENSMUST00000000984.9	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54616578	54621583	-	54616578	54645960	A5SS	0.33	50	50	ENSMUST00000000984.9	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54616578	54635342	-	54616578	54645960	A5SS	0.33	50	50	ENSMUST00000000984.9	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54646505;54649103	54649042;54654046	-	54646505	54654046	cassetteExon	0.5	100	100	ENSMUST00000226753.2	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54646505;54651470	54651337;54654046	-	54646505	54654046	cassetteExon	0.5	100	100	ENSMUST00000226753.2	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54646505	54647535	-	54646505	54654046	A5SS	0.12	50	50	ENSMUST00000226753.2	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54646505	54647610	-	54646505	54654046	A5SS	0.12	50	50	ENSMUST00000226753.2	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54646505	54647997	-	54646505	54654046	A5SS	0.12	50	50	ENSMUST00000226753.2	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54646505	54648053	-	54646505	54654046	A5SS	0.12	50	50	ENSMUST00000226753.2	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54654227	54654945	-	54654227	54655114	A5SS	0.5	50	50	ENSMUST00000226753.2	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54646505;54649103	54649042;54651337	-	54646505	54651337	cassetteExon	0.5	100	100	ENSMUST00000197440.5	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54646505;54649103	54649042;54654046	-	54646505;54651470	54651337;54654046	MXE	0.5	100	100	ENSMUST00000197440.5	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54646505	54647535	-	54646505	54651337	A5SS	0.12	50	50	ENSMUST00000197440.5	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54646505	54647610	-	54646505	54651337	A5SS	0.12	50	50	ENSMUST00000197440.5	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54646505	54647997	-	54646505	54651337	A5SS	0.12	50	50	ENSMUST00000197440.5	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54646505	54648053	-	54646505	54651337	A5SS	0.12	50	50	ENSMUST00000197440.5	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54646505	54647997	-	54646505	54647535	5pMXE	0.12	50	50	ENSMUST00000195970.5	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54646505	54648053	-	54646505	54647535	5pMXE	0.12	50	50	ENSMUST00000195970.5	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54646505	54649042	-	54646505	54647535	5pMXE	0.12	50	50	ENSMUST00000195970.5	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54646505	54647610	-	54646505	54647535	A5SS	0.12	50	50	ENSMUST00000195970.5	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54616578	54635342	-	54616578	54621583	5pMXE	0.33	50	50	ENSMUST00000196966.5	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54646505	54647997	-	54646505	54647610	5pMXE	0.12	50	50	ENSMUST00000228488.2	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54646505	54648053	-	54646505	54647610	5pMXE	0.12	50	50	ENSMUST00000228488.2	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54646505	54649042	-	54646505	54647610	5pMXE	0.12	50	50	ENSMUST00000228488.2	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54646505	54649042	-	54646505	54647997	5pMXE	0.12	50	50	ENSMUST00000200545.2	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54646505	54648053	-	54646505	54647997	A5SS	0.12	50	50	ENSMUST00000200545.2	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54646505	54649042	-	54646505	54648053	5pMXE	0.12	50	50	ENSMUST00000227967.2	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54649103	54654046	-	54649103	54651337	5pMXE	0.33	50	50	ENSMUST00000227334.2	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54649103	54649474	-	54649103	54651337	A5SS	0.33	50	50	ENSMUST00000227334.2	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54649103	54654046	-	54649103	54649474	5pMXE	0.33	50	50	ENSMUST00000196215.5	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54649103;54651470	54651337;54654046	-	54649103	54654046	cassetteExon	0.5	100	100	ENSMUST00000195999.2	ENSMUSG00000000958.11	Slc7a7	chr14	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
chr14	54664695	54667039	+	54664695;54666105	54666041;54667039	ES	0.5	50	50	ENSMUST00000010550.12	ENSMUSG00000010406.13	Mrpl52	chr14	protein_coding	mitochondrial ribosomal protein L52
chr14	54677477	54681234	+	54677477	54677798	3pMXE	0.5	50	50	ENSMUST00000089688.6	ENSMUSG00000000957.12	Mmp14	chr14	protein_coding	matrix metallopeptidase 14 (membrane-inserted)
chr14	54669430;54671581	54671415;54673202	+	54669430	54673202	cassetteExon	0.5	100	100	ENSMUST00000089688.6	ENSMUSG00000000957.12	Mmp14	chr14	protein_coding	matrix metallopeptidase 14 (membrane-inserted)
chr14	54670098	54673202	+	54669430	54673202	A5SS	0.33	50	50	ENSMUST00000089688.6	ENSMUSG00000000957.12	Mmp14	chr14	protein_coding	matrix metallopeptidase 14 (membrane-inserted)
chr14	54670098	54673202	+	54671581	54673202	A5SS&ES	0.33	50	50	ENSMUST00000197874.2	ENSMUSG00000000957.12	Mmp14	chr14	protein_coding	matrix metallopeptidase 14 (membrane-inserted)
chr14	54703178	54704917	+	54703166	54704917	A5SS	0.5	50	50	ENSMUST00000022782.10	ENSMUSG00000022175.10	Lrp10	chr14	protein_coding	low-density lipoprotein receptor-related protein 10
chr14	54705331	54706493	+	54706238	54706493	A5SS	0.5	50	50	ENSMUST00000022782.10	ENSMUSG00000022175.10	Lrp10	chr14	protein_coding	low-density lipoprotein receptor-related protein 10
chr14	54715272	54716411	+	54715272;54715558	54715485;54716411	ES	0.5	50	50	ENSMUST00000164766.8	ENSMUSG00000022176.12	Rem2	chr14	protein_coding	rad and gem related GTP binding protein 2
chr14	54713831	54714931	+	54713831	54714928	A3SS	0.5	50	50	ENSMUST00000164766.8	ENSMUSG00000022176.12	Rem2	chr14	protein_coding	rad and gem related GTP binding protein 2
chr14	54715558	54716481	+	54715558	54716411	A3SS	0.5	50	50	ENSMUST00000164766.8	ENSMUSG00000022176.12	Rem2	chr14	protein_coding	rad and gem related GTP binding protein 2
chr14	54715272	54716411	+	54715272	54715485	A3SS&ES	0.5	50	50	ENSMUST00000168930.2	ENSMUSG00000022176.12	Rem2	chr14	protein_coding	rad and gem related GTP binding protein 2
chr14	54753648	54754704	-	54753648;54754072	54753954;54754704	ES	0.5	50	50	ENSMUST00000023873.12	ENSMUSG00000023110.13	Prmt5	chr14	protein_coding	protein arginine N-methyltransferase 5
chr14	54753711	54753954	-	54753648	54753954	A3SS	0.5	50	50	ENSMUST00000023873.12	ENSMUSG00000023110.13	Prmt5	chr14	protein_coding	protein arginine N-methyltransferase 5
chr14	54749611	54750781	-	54749611	54750748	A5SS	0.5	50	50	ENSMUST00000023873.12	ENSMUSG00000023110.13	Prmt5	chr14	protein_coding	protein arginine N-methyltransferase 5
chr14	54754072	54754625	-	54754072	54754704	A5SS	0.5	50	50	ENSMUST00000023873.12	ENSMUSG00000023110.13	Prmt5	chr14	protein_coding	protein arginine N-methyltransferase 5
chr14	54753648	54754704	-	54753648	54753954	A5SS&ES	0.5	50	50	ENSMUST00000147214.8	ENSMUSG00000023110.13	Prmt5	chr14	protein_coding	protein arginine N-methyltransferase 5
chr14	54753648	54754704	-	54754072	54754704	A3SS	0.5	50	50	ENSMUST00000133552.8	ENSMUSG00000023110.13	Prmt5	chr14	protein_coding	protein arginine N-methyltransferase 5
chr14	54787493;54788211	54788099;54789594	-	54787493	54789594	cassetteExon	0.5	100	100	ENSMUST00000022784.9	ENSMUSG00000022177.10	Haus4	chr14	protein_coding	HAUS augmin-like complex, subunit 4
chr14	54789667	54791327	-	54789667	54791632	A5SS	0.5	50	50	ENSMUST00000022784.9	ENSMUSG00000022177.10	Haus4	chr14	protein_coding	HAUS augmin-like complex, subunit 4
chr14	54822143	54822436	-	54822163	54822436	A3SS	0.5	50	50	ENSMUST00000022786.6	ENSMUSG00000022179.6	4931414P19Rik	chr14	protein_coding	RIKEN cDNA 4931414P19 gene
chr14	54851938	54854233	-	54851938	54853972	A5SS	0.5	50	50	ENSMUST00000022803.6	ENSMUSG00000022193.8	Psmb5	chr14	protein_coding	proteasome (prosome, macropain) subunit, beta type 5
chr14	54871224	54874778	-	54873926	54874778	A3SS&ES	0.5	50	50	ENSMUST00000067784.8	ENSMUSG00000059674.8	Cdh24	chr14	protein_coding	cadherin-like 24
chr14	54889315	54899625	-	54889315	54890992	5pMXE	0.33	50	50	ENSMUST00000126166.8	ENSMUSG00000022185.20	Acin1	chr14	protein_coding	apoptotic chromatin condensation inducer 1
chr14	54889315;54890735	54890671;54890992	-	54889315	54890992	cassetteExon	0.5	100	100	ENSMUST00000126166.8	ENSMUSG00000022185.20	Acin1	chr14	protein_coding	apoptotic chromatin condensation inducer 1
chr14	54889315;54890774	54890671;54890992	-	54889315	54890992	cassetteExon	0.5	100	100	ENSMUST00000126166.8	ENSMUSG00000022185.20	Acin1	chr14	protein_coding	apoptotic chromatin condensation inducer 1
chr14	54884024	54884160	-	54884060	54884160	A3SS	0.5	50	50	ENSMUST00000126166.8	ENSMUSG00000022185.20	Acin1	chr14	protein_coding	apoptotic chromatin condensation inducer 1
chr14	54884290	54885545	-	54884293	54885545	A3SS	0.5	50	50	ENSMUST00000126166.8	ENSMUSG00000022185.20	Acin1	chr14	protein_coding	apoptotic chromatin condensation inducer 1
chr14	54888344	54889174	-	54885587	54889174	A3SS	0.33	50	50	ENSMUST00000126166.8	ENSMUSG00000022185.20	Acin1	chr14	protein_coding	apoptotic chromatin condensation inducer 1
chr14	54888374	54889174	-	54885587	54889174	A3SS	0.33	50	50	ENSMUST00000126166.8	ENSMUSG00000022185.20	Acin1	chr14	protein_coding	apoptotic chromatin condensation inducer 1
chr14	54885587	54886989	-	54885587	54889174	A5SS	0.33	50	50	ENSMUST00000126166.8	ENSMUSG00000022185.20	Acin1	chr14	protein_coding	apoptotic chromatin condensation inducer 1
chr14	54885587	54887017	-	54885587	54889174	A5SS	0.33	50	50	ENSMUST00000126166.8	ENSMUSG00000022185.20	Acin1	chr14	protein_coding	apoptotic chromatin condensation inducer 1
chr14	54890774	54891137	-	54890735	54891137	A3SS	0.5	50	50	ENSMUST00000022794.14	ENSMUSG00000022185.20	Acin1	chr14	protein_coding	apoptotic chromatin condensation inducer 1
chr14	54889315	54890992	-	54889315	54890671	A5SS&ES	0.5	50	50	ENSMUST00000022794.14	ENSMUSG00000022185.20	Acin1	chr14	protein_coding	apoptotic chromatin condensation inducer 1
chr14	54890735	54890992	-	54890735	54891137	A5SS	0.5	50	50	ENSMUST00000022794.14	ENSMUSG00000022185.20	Acin1	chr14	protein_coding	apoptotic chromatin condensation inducer 1
chr14	54904618	54916698	-	54904618;54916319	54916200;54916698	ES	0.5	50	50	ENSMUST00000022793.15	ENSMUSG00000022185.20	Acin1	chr14	protein_coding	apoptotic chromatin condensation inducer 1
chr14	54913302	54916200	-	54904618	54916200	A3SS	0.5	50	50	ENSMUST00000022793.15	ENSMUSG00000022185.20	Acin1	chr14	protein_coding	apoptotic chromatin condensation inducer 1
chr14	54889315	54890671	-	54889315	54899625	A5SS	0.33	50	50	ENSMUST00000022793.15	ENSMUSG00000022185.20	Acin1	chr14	protein_coding	apoptotic chromatin condensation inducer 1
chr14	54922533	54923347	-	54922533	54923926	A5SS	0.5	50	50	ENSMUST00000022793.15	ENSMUSG00000022185.20	Acin1	chr14	protein_coding	apoptotic chromatin condensation inducer 1
chr14	54890774	54890992	-	54890735	54890992	A3SS	0.33	50	50	ENSMUST00000150371.8	ENSMUSG00000022185.20	Acin1	chr14	protein_coding	apoptotic chromatin condensation inducer 1
chr14	54885587	54887017	-	54885587	54886989	A5SS	0.33	50	50	ENSMUST00000167495.8	ENSMUSG00000022185.20	Acin1	chr14	protein_coding	apoptotic chromatin condensation inducer 1
chr14	54890774	54891137	-	54890774	54890992	A5SS	0.5	50	50	ENSMUST00000123875.2	ENSMUSG00000022185.20	Acin1	chr14	protein_coding	apoptotic chromatin condensation inducer 1
chr14	54888374	54889174	-	54888344	54889174	A3SS	0.33	50	50	ENSMUST00000136909.8	ENSMUSG00000022185.20	Acin1	chr14	protein_coding	apoptotic chromatin condensation inducer 1
chr14	54924577;54926734	54926643;54927261	+	54924577	54927261	cassetteExon	0.5	100	100	ENSMUST00000038539.8	ENSMUSG00000040822.8	1700123O20Rik	chr14	protein_coding	RIKEN cDNA 1700123O20 gene
chr14	54924110	54924494	+	54924000	54924494	A5SS	0.5	50	50	ENSMUST00000226235.2	ENSMUSG00000040822.8	1700123O20Rik	chr14	protein_coding	RIKEN cDNA 1700123O20 gene
chr14	54933696	54934300	-	54933696;54934001	54933876;54934300	ES	0.5	50	50	ENSMUST00000224691.3	ENSMUSG00000114865.3	Gm29776	chr14	protein_coding	predicted gene, 29776
chr14	55054043	55057595	+	55054043;55057046	55056994;55057595	ES	0.5	50	50	ENSMUST00000219350.2	ENSMUSG00000112858.3	Rnf212b	chr14	protein_coding	ring finger protein 212B
chr14	55076742	55079340	+	55076742;55077752	55077724;55079340	ES	0.5	50	50	ENSMUST00000219350.2	ENSMUSG00000112858.3	Rnf212b	chr14	protein_coding	ring finger protein 212B
chr14	55080292	55086124	+	55080292;55082318	55082287;55086124	ES	0.5	50	50	ENSMUST00000219350.2	ENSMUSG00000112858.3	Rnf212b	chr14	protein_coding	ring finger protein 212B
chr14	55057046	55085754	+	55057046	55057595	A3SS&ES	0.5	50	50	ENSMUST00000219350.2	ENSMUSG00000112858.3	Rnf212b	chr14	protein_coding	ring finger protein 212B
chr14	55080292	55085754	+	55080292	55082287	A3SS&ES	0.33	50	50	ENSMUST00000219350.2	ENSMUSG00000112858.3	Rnf212b	chr14	protein_coding	ring finger protein 212B
chr14	55082318	55085754	+	55082318	55086124	A3SS	0.5	50	50	ENSMUST00000219350.2	ENSMUSG00000112858.3	Rnf212b	chr14	protein_coding	ring finger protein 212B
chr14	55053865	55053943	+	55051742	55053943	A5SS	0.5	50	50	ENSMUST00000219350.2	ENSMUSG00000112858.3	Rnf212b	chr14	protein_coding	ring finger protein 212B
chr14	55080292	55085754	+	55080292	55086124	A3SS	0.33	50	50	ENSMUST00000218311.2	ENSMUSG00000112858.3	Rnf212b	chr14	protein_coding	ring finger protein 212B
chr14	55054043	55057595	+	55054043	55056994	A3SS&ES	0.5	50	50	ENSMUST00000220403.2	ENSMUSG00000112858.3	Rnf212b	chr14	protein_coding	ring finger protein 212B
chr14	55080292	55085754	+	55057046	55085754	A5SS	0.33	50	50	ENSMUST00000220403.2	ENSMUSG00000112858.3	Rnf212b	chr14	protein_coding	ring finger protein 212B
chr14	55082318	55085754	+	55057046	55085754	A5SS	0.33	50	50	ENSMUST00000220403.2	ENSMUSG00000112858.3	Rnf212b	chr14	protein_coding	ring finger protein 212B
chr14	55080292	55085754	+	55080292;55082318	55082287;55085754	ES	0.5	50	50	ENSMUST00000219519.3	ENSMUSG00000112858.3	Rnf212b	chr14	protein_coding	ring finger protein 212B
chr14	55080292	55086124	+	55080292	55082287	A3SS&ES	0.33	50	50	ENSMUST00000219519.3	ENSMUSG00000112858.3	Rnf212b	chr14	protein_coding	ring finger protein 212B
chr14	55095738	55101398	-	55095738	55097885	5pMXE	0.33	50	50	ENSMUST00000081162.6	ENSMUSG00000057156.11	Homez	chr14	protein_coding	homeodomain leucine zipper-encoding gene
chr14	55095738	55108339	-	55095738	55097885	5pMXE	0.33	50	50	ENSMUST00000081162.6	ENSMUSG00000057156.11	Homez	chr14	protein_coding	homeodomain leucine zipper-encoding gene
chr14	55095738	55108339	-	55095738	55101398	5pMXE	0.33	50	50	ENSMUST00000142283.4	ENSMUSG00000057156.11	Homez	chr14	protein_coding	homeodomain leucine zipper-encoding gene
chr14	55122270	55132305	+	55122270	55122841	3pMXE	0.5	50	50	ENSMUST00000022806.10	ENSMUSG00000089682.11	Bcl2l2	chr14	protein_coding	BCL2-like 2
chr14	55121341	55122082	+	55121341	55121831	A3SS	0.5	50	50	ENSMUST00000022806.10	ENSMUSG00000089682.11	Bcl2l2	chr14	protein_coding	BCL2-like 2
chr14	55121161	55121254	+	55120963	55121254	A5SS	0.5	50	50	ENSMUST00000022806.10	ENSMUSG00000089682.11	Bcl2l2	chr14	protein_coding	BCL2-like 2
chr14	55130195	55132305	+	55122270	55132305	A5SS	0.25	50	50	ENSMUST00000134077.2	ENSMUSG00000092232.2	Gm20521	chr14	protein_coding	predicted gene 20521
chr14	55131951	55132305	+	55122270	55132305	A5SS	0.25	50	50	ENSMUST00000134077.2	ENSMUSG00000092232.2	Gm20521	chr14	protein_coding	predicted gene 20521
chr14	55132126	55132305	+	55122270	55132305	A5SS	0.25	50	50	ENSMUST00000134077.2	ENSMUSG00000092232.2	Gm20521	chr14	protein_coding	predicted gene 20521
chr14	55131951	55132305	+	55130195	55132305	A5SS	0.25	50	50	ENSMUST00000140691.8	ENSMUSG00000022194.16	Pabpn1	chr14	protein_coding	poly(A) binding protein, nuclear 1
chr14	55132126	55132305	+	55130195	55132305	A5SS	0.25	50	50	ENSMUST00000140691.8	ENSMUSG00000022194.16	Pabpn1	chr14	protein_coding	poly(A) binding protein, nuclear 1
chr14	55132126	55132305	+	55131951	55132305	A5SS	0.25	50	50	ENSMUST00000116476.9	ENSMUSG00000022194.16	Pabpn1	chr14	protein_coding	poly(A) binding protein, nuclear 1
chr14	55147282	55149699	-	55147282;55149609	55149506;55149699	ES	0.5	50	50	ENSMUST00000228249.2	ENSMUSG00000022199.13	Slc22a17	chr14	protein_coding	solute carrier family 22 (organic cation transporter), member 17
chr14	55145560	55145959	-	55145560;55145823	55145718;55145959	ES	0.5	50	50	ENSMUST00000050772.10	ENSMUSG00000022199.13	Slc22a17	chr14	protein_coding	solute carrier family 22 (organic cation transporter), member 17
chr14	55146104	55147128	-	55146104;55146445	55146280;55147128	ES	0.33	50	50	ENSMUST00000050772.10	ENSMUSG00000022199.13	Slc22a17	chr14	protein_coding	solute carrier family 22 (organic cation transporter), member 17
chr14	55146320	55147128	-	55146445	55147128	A3SS	0.33	50	50	ENSMUST00000050772.10	ENSMUSG00000022199.13	Slc22a17	chr14	protein_coding	solute carrier family 22 (organic cation transporter), member 17
chr14	55150187	55150324	-	55150190	55150324	A3SS	0.5	50	50	ENSMUST00000050772.10	ENSMUSG00000022199.13	Slc22a17	chr14	protein_coding	solute carrier family 22 (organic cation transporter), member 17
chr14	55145087	55145289	-	55145087	55145343	A5SS	0.5	50	50	ENSMUST00000050772.10	ENSMUSG00000022199.13	Slc22a17	chr14	protein_coding	solute carrier family 22 (organic cation transporter), member 17
chr14	55145560	55145959	-	55145823	55145959	A3SS	0.5	50	50	ENSMUST00000226718.2	ENSMUSG00000022199.13	Slc22a17	chr14	protein_coding	solute carrier family 22 (organic cation transporter), member 17
chr14	55146104;55146320	55146280;55147128	-	55146104	55147128	cassetteExon	0.5	100	100	ENSMUST00000227600.2	ENSMUSG00000022199.13	Slc22a17	chr14	protein_coding	solute carrier family 22 (organic cation transporter), member 17
chr14	55158102	55162895	-	55158102;55158638	55158360;55162895	ES	0.5	50	50	ENSMUST00000022813.8	ENSMUSG00000022203.8	Efs	chr14	protein_coding	embryonal Fyn-associated substrate
chr14	55174240	55176039	+	55174240;55175504	55175352;55176039	ES	0.5	50	50	ENSMUST00000037814.8	ENSMUSG00000040759.10	Cmtm5	chr14	protein_coding	CKLF-like MARVEL transmembrane domain containing 5
chr14	55174240	55176039	+	55175504	55176039	5pMXE	0.5	50	50	ENSMUST00000226807.2	ENSMUSG00000040759.10	Cmtm5	chr14	protein_coding	CKLF-like MARVEL transmembrane domain containing 5
chr14	55203356	55204348	-	55203356	55204011	5pMXE	0.5	50	50	ENSMUST00000081857.14	ENSMUSG00000040752.17	Myh6	chr14	protein_coding	myosin, heavy polypeptide 6, cardiac muscle, alpha
chr14	55179461	55179810	-	55179458	55179810	A3SS	0.5	50	50	ENSMUST00000081857.14	ENSMUSG00000040752.17	Myh6	chr14	protein_coding	myosin, heavy polypeptide 6, cardiac muscle, alpha
chr14	55202955	55203224	-	55202932	55203224	A3SS	0.5	50	50	ENSMUST00000081857.14	ENSMUSG00000040752.17	Myh6	chr14	protein_coding	myosin, heavy polypeptide 6, cardiac muscle, alpha
chr14	55203292	55204011	-	55203356	55204011	A3SS	0.5	50	50	ENSMUST00000081857.14	ENSMUSG00000040752.17	Myh6	chr14	protein_coding	myosin, heavy polypeptide 6, cardiac muscle, alpha
chr14	55206304	55208867	+	55206304	55206758	3pMXE	0.5	50	50	ENSMUST00000185798.2	ENSMUSG00000097652.3	Mhrt	chr14	lncRNA	myosin heavy chain associated RNA transcript
chr14	55230816	55231968	-	55230816;55231082	55231045;55231968	ES	0.33	50	50	ENSMUST00000102803.11	ENSMUSG00000053093.17	Myh7	chr14	protein_coding	myosin, heavy polypeptide 7, cardiac muscle, beta
chr14	55231137	55231968	-	55231082	55231968	A3SS	0.33	50	50	ENSMUST00000102803.11	ENSMUSG00000053093.17	Myh7	chr14	protein_coding	myosin, heavy polypeptide 7, cardiac muscle, beta
chr14	55231082	55231790	-	55231082	55231968	A5SS	0.33	50	50	ENSMUST00000102803.11	ENSMUSG00000053093.17	Myh7	chr14	protein_coding	myosin, heavy polypeptide 7, cardiac muscle, beta
chr14	55231082	55231868	-	55231082	55231968	A5SS	0.33	50	50	ENSMUST00000102803.11	ENSMUSG00000053093.17	Myh7	chr14	protein_coding	myosin, heavy polypeptide 7, cardiac muscle, beta
chr14	55230816	55231968	-	55230816	55231045	A5SS&ES	0.5	50	50	ENSMUST00000168485.8	ENSMUSG00000053093.17	Myh7	chr14	protein_coding	myosin, heavy polypeptide 7, cardiac muscle, beta
chr14	55231082	55231868	-	55231082	55231790	A5SS	0.33	50	50	ENSMUST00000168485.8	ENSMUSG00000053093.17	Myh7	chr14	protein_coding	myosin, heavy polypeptide 7, cardiac muscle, beta
chr14	55230816;55231137	55231045;55231968	-	55230816	55231968	cassetteExon	0.5	100	100	ENSMUST00000227518.2	ENSMUSG00000053093.17	Myh7	chr14	protein_coding	myosin, heavy polypeptide 7, cardiac muscle, beta
chr14	55293634	55334837	+	55293634	55293821	3pMXE	0.5	50	50	ENSMUST00000176872.4	ENSMUSG00000093452.5	Zfhx2os	chr14	lncRNA	zinc finger homeobox 2, opposite strand
chr14	55291476	55292339	+	55291451	55292339	A5SS	0.5	50	50	ENSMUST00000176872.4	ENSMUSG00000093452.5	Zfhx2os	chr14	lncRNA	zinc finger homeobox 2, opposite strand
chr14	55293080	55293481	+	55292518	55293481	A5SS	0.5	50	50	ENSMUST00000176872.4	ENSMUSG00000093452.5	Zfhx2os	chr14	lncRNA	zinc finger homeobox 2, opposite strand
chr14	55293887	55309319	+	55293887	55334837	A3SS	0.5	50	50	ENSMUST00000183822.3	ENSMUSG00000100162.3	Gm20687	chr14	lncRNA	predicted gene 20687
chr14	55293634	55334837	+	55293887	55334837	A5SS	0.25	50	50	ENSMUST00000183822.3	ENSMUSG00000100162.3	Gm20687	chr14	lncRNA	predicted gene 20687
chr14	55312213	55334837	+	55293887	55334837	A5SS	0.25	50	50	ENSMUST00000183822.3	ENSMUSG00000100162.3	Gm20687	chr14	lncRNA	predicted gene 20687
chr14	55333463	55334837	+	55293887	55334837	A5SS	0.25	50	50	ENSMUST00000183822.3	ENSMUSG00000100162.3	Gm20687	chr14	lncRNA	predicted gene 20687
chr14	55293634;55293887	55293821;55334837	+	55293634	55334837	cassetteExon	0.5	100	100	ENSMUST00000183993.8	ENSMUSG00000100162.3	Gm20687	chr14	lncRNA	predicted gene 20687
chr14	55312213	55334837	+	55293634	55334837	A5SS	0.25	50	50	ENSMUST00000183993.8	ENSMUSG00000100162.3	Gm20687	chr14	lncRNA	predicted gene 20687
chr14	55333463	55334837	+	55293634	55334837	A5SS	0.25	50	50	ENSMUST00000183993.8	ENSMUSG00000100162.3	Gm20687	chr14	lncRNA	predicted gene 20687
chr14	55333463	55334837	+	55312213	55334837	A5SS	0.25	50	50	ENSMUST00000185121.8	ENSMUSG00000100162.3	Gm20687	chr14	lncRNA	predicted gene 20687
chr14	55305765	55307566	-	55305765	55307596	A5SS	0.5	50	50	ENSMUST00000036328.9	ENSMUSG00000040721.10	Zfhx2	chr14	protein_coding	zinc finger homeobox 2
chr14	55341915;55342115	55342039;55342288	-	55341915	55342288	cassetteExon	0.5	100	100	ENSMUST00000151314.9	ENSMUSG00000040701.17	Ap1g2	chr14	protein_coding	adaptor protein complex AP-1, gamma 2 subunit
chr14	55340018	55340099	-	55340019	55340099	A3SS	0.5	50	50	ENSMUST00000151314.9	ENSMUSG00000040701.17	Ap1g2	chr14	protein_coding	adaptor protein complex AP-1, gamma 2 subunit
chr14	55342626	55343508	-	55342626	55342763	A5SS&ES	0.5	50	50	ENSMUST00000151314.9	ENSMUSG00000040701.17	Ap1g2	chr14	protein_coding	adaptor protein complex AP-1, gamma 2 subunit
chr14	55343586	55343826	-	55343586	55343965	A5SS	0.5	50	50	ENSMUST00000151314.9	ENSMUSG00000040701.17	Ap1g2	chr14	protein_coding	adaptor protein complex AP-1, gamma 2 subunit
chr14	55341915	55342288	-	55341915	55342039	A5SS	0.5	50	50	ENSMUST00000133004.8	ENSMUSG00000040701.17	Ap1g2	chr14	protein_coding	adaptor protein complex AP-1, gamma 2 subunit
chr14	55717660	55724550	+	55717660;55723675	55723574;55724550	ES	0.5	50	50	ENSMUST00000022821.8	ENSMUSG00000022210.8	Dhrs4	chr14	protein_coding	dehydrogenase/reductase (SDR family) member 4
chr14	55723675	55724717	+	55723675;55724620	55724550;55724717	ES	0.5	50	50	ENSMUST00000022821.8	ENSMUSG00000022210.8	Dhrs4	chr14	protein_coding	dehydrogenase/reductase (SDR family) member 4
chr14	55717660	55725041	+	55717660	55724550	3pMXE	0.33	50	50	ENSMUST00000227488.2	ENSMUSG00000022210.8	Dhrs4	chr14	protein_coding	dehydrogenase/reductase (SDR family) member 4
chr14	55723675	55724717	+	55723675	55724550	A3SS	0.5	50	50	ENSMUST00000227513.2	ENSMUSG00000022210.8	Dhrs4	chr14	protein_coding	dehydrogenase/reductase (SDR family) member 4
chr14	55717660;55724768	55724550;55725041	+	55717660	55725041	cassetteExon	0.5	100	100	ENSMUST00000226902.2	ENSMUSG00000022210.8	Dhrs4	chr14	protein_coding	dehydrogenase/reductase (SDR family) member 4
chr14	55717660	55723574	+	55717660	55725041	A3SS	0.33	50	50	ENSMUST00000226902.2	ENSMUSG00000022210.8	Dhrs4	chr14	protein_coding	dehydrogenase/reductase (SDR family) member 4
chr14	55717660;55724620	55724550;55724717	+	55717660;55723675	55723574;55724717	MXE	0.5	100	100	ENSMUST00000228353.2	ENSMUSG00000022210.8	Dhrs4	chr14	protein_coding	dehydrogenase/reductase (SDR family) member 4
chr14	55717660	55725041	+	55724768	55725041	5pMXE	0.5	50	50	ENSMUST00000227542.2	ENSMUSG00000022210.8	Dhrs4	chr14	protein_coding	dehydrogenase/reductase (SDR family) member 4
chr14	55732185	55732861	+	55732185;55732350	55732262;55732861	ES	0.5	50	50	ENSMUST00000228877.2	ENSMUSG00000022211.10	Carmil3	chr14	protein_coding	capping protein regulator and myosin 1 linker 3
chr14	55732350	55733181	+	55732350;55732955	55732861;55733181	ES	0.5	50	50	ENSMUST00000228877.2	ENSMUSG00000022211.10	Carmil3	chr14	protein_coding	capping protein regulator and myosin 1 linker 3
chr14	55731706	55731805	+	55731706	55731864	A3SS	0.5	50	50	ENSMUST00000228877.2	ENSMUSG00000022211.10	Carmil3	chr14	protein_coding	capping protein regulator and myosin 1 linker 3
chr14	55745261	55745374	+	55745261	55745377	A3SS	0.5	50	50	ENSMUST00000228877.2	ENSMUSG00000022211.10	Carmil3	chr14	protein_coding	capping protein regulator and myosin 1 linker 3
chr14	55731096	55731285	+	55731138	55731285	A5SS	0.5	50	50	ENSMUST00000228877.2	ENSMUSG00000022211.10	Carmil3	chr14	protein_coding	capping protein regulator and myosin 1 linker 3
chr14	55742928	55743027	+	55742923	55743027	A5SS	0.5	50	50	ENSMUST00000228877.2	ENSMUSG00000022211.10	Carmil3	chr14	protein_coding	capping protein regulator and myosin 1 linker 3
chr14	55731697	55731805	+	55731706	55731805	A5SS	0.5	50	50	ENSMUST00000076236.7	ENSMUSG00000022211.10	Carmil3	chr14	protein_coding	capping protein regulator and myosin 1 linker 3
chr14	55732185;55732955	55732861;55733181	+	55732185;55732350	55732262;55733181	MXE	0.5	100	100	ENSMUST00000227070.2	ENSMUSG00000022211.10	Carmil3	chr14	protein_coding	capping protein regulator and myosin 1 linker 3
chr14	55748166	55749415	+	55748166	55749438	A3SS	0.5	50	50	ENSMUST00000165262.8	ENSMUSG00000022212.16	Cpne6	chr14	protein_coding	copine VI
chr14	55750218	55750509	+	55750218	55750629	A3SS	0.5	50	50	ENSMUST00000165262.8	ENSMUSG00000022212.16	Cpne6	chr14	protein_coding	copine VI
chr14	55753842	55753984	+	55753842	55753987	A3SS	0.5	50	50	ENSMUST00000165262.8	ENSMUSG00000022212.16	Cpne6	chr14	protein_coding	copine VI
chr14	55748904	55749438	+	55748166	55749438	A5SS	0.5	50	50	ENSMUST00000165262.8	ENSMUSG00000022212.16	Cpne6	chr14	protein_coding	copine VI
chr14	55759952	55762380	-	55759952	55761545	5pMXE	0.5	50	50	ENSMUST00000111404.8	ENSMUSG00000040632.17	Nrl	chr14	protein_coding	neural retina leucine zipper gene
chr14	55758344	55758654	-	55758344	55759545	A5SS	0.5	50	50	ENSMUST00000111404.8	ENSMUSG00000040632.17	Nrl	chr14	protein_coding	neural retina leucine zipper gene
chr14	55759952	55762380	-	55759952;55761671	55761545;55762380	ES	0.33	50	50	ENSMUST00000062232.15	ENSMUSG00000040632.17	Nrl	chr14	protein_coding	neural retina leucine zipper gene
chr14	55761651	55762380	-	55761671	55762380	A3SS	0.33	50	50	ENSMUST00000062232.15	ENSMUSG00000040632.17	Nrl	chr14	protein_coding	neural retina leucine zipper gene
chr14	55759952	55762380	-	55759952;55761651	55761545;55762380	ES	0.33	50	50	ENSMUST00000178694.3	ENSMUSG00000040632.17	Nrl	chr14	protein_coding	neural retina leucine zipper gene
chr14	55780108	55781317	+	55780108;55781230	55781046;55781317	ES	0.5	50	50	ENSMUST00000048781.4	ENSMUSG00000040618.8	Pck2	chr14	protein_coding	phosphoenolpyruvate carboxykinase 2 (mitochondrial)
chr14	55781520	55782342	+	55781520;55782039	55781852;55782342	ES	0.5	50	50	ENSMUST00000048781.4	ENSMUSG00000040618.8	Pck2	chr14	protein_coding	phosphoenolpyruvate carboxykinase 2 (mitochondrial)
chr14	55785291	55785762	+	55785291;55785592	55785497;55785762	ES	0.5	50	50	ENSMUST00000048781.4	ENSMUSG00000040618.8	Pck2	chr14	protein_coding	phosphoenolpyruvate carboxykinase 2 (mitochondrial)
chr14	55785592	55786094	+	55785592	55785762	A3SS	0.5	50	50	ENSMUST00000048781.4	ENSMUSG00000040618.8	Pck2	chr14	protein_coding	phosphoenolpyruvate carboxykinase 2 (mitochondrial)
chr14	55781520	55782664	+	55781520;55782504	55781852;55782664	ES	0.5	50	50	ENSMUST00000226770.2	ENSMUSG00000040618.8	Pck2	chr14	protein_coding	phosphoenolpyruvate carboxykinase 2 (mitochondrial)
chr14	55781520	55782342	+	55781520	55781852	A3SS	0.33	50	50	ENSMUST00000226770.2	ENSMUSG00000040618.8	Pck2	chr14	protein_coding	phosphoenolpyruvate carboxykinase 2 (mitochondrial)
chr14	55781520	55782664	+	55781520	55781852	A3SS	0.33	50	50	ENSMUST00000226664.2	ENSMUSG00000040618.8	Pck2	chr14	protein_coding	phosphoenolpyruvate carboxykinase 2 (mitochondrial)
chr14	55785291	55785762	+	55785291	55785497	A3SS&ES	0.5	50	50	ENSMUST00000228240.2	ENSMUSG00000040618.8	Pck2	chr14	protein_coding	phosphoenolpyruvate carboxykinase 2 (mitochondrial)
chr14	55780108	55781317	+	55781230	55781317	5pMXE	0.5	50	50	ENSMUST00000228283.2	ENSMUSG00000040618.8	Pck2	chr14	protein_coding	phosphoenolpyruvate carboxykinase 2 (mitochondrial)
chr14	55781520;55782504	55782342;55782664	+	55781520	55782664	cassetteExon	0.5	100	100	ENSMUST00000226231.2	ENSMUSG00000040618.8	Pck2	chr14	protein_coding	phosphoenolpyruvate carboxykinase 2 (mitochondrial)
chr14	55800956	55801510	+	55800956;55801241	55801177;55801510	ES	0.5	50	50	ENSMUST00000117236.8	ENSMUSG00000022214.16	Dcaf11	chr14	protein_coding	DDB1 and CUL4 associated factor 11
chr14	55797578;55798084	55797898;55798667	+	55797578	55798667	cassetteExon	0.5	100	100	ENSMUST00000117236.8	ENSMUSG00000022214.16	Dcaf11	chr14	protein_coding	DDB1 and CUL4 associated factor 11
chr14	55797578	55798532	+	55797578	55798667	A3SS	0.25	50	50	ENSMUST00000117236.8	ENSMUSG00000022214.16	Dcaf11	chr14	protein_coding	DDB1 and CUL4 associated factor 11
chr14	55797578	55798693	+	55797578	55798667	A3SS	0.25	50	50	ENSMUST00000117236.8	ENSMUSG00000022214.16	Dcaf11	chr14	protein_coding	DDB1 and CUL4 associated factor 11
chr14	55798899	55800404	+	55798899	55800349	A3SS	0.5	50	50	ENSMUST00000117236.8	ENSMUSG00000022214.16	Dcaf11	chr14	protein_coding	DDB1 and CUL4 associated factor 11
chr14	55798876	55800349	+	55798899	55800349	A5SS	0.5	50	50	ENSMUST00000117236.8	ENSMUSG00000022214.16	Dcaf11	chr14	protein_coding	DDB1 and CUL4 associated factor 11
chr14	55803343	55804321	+	55803279	55804321	A5SS	0.5	50	50	ENSMUST00000117236.8	ENSMUSG00000022214.16	Dcaf11	chr14	protein_coding	DDB1 and CUL4 associated factor 11
chr14	55804280	55804705	+	55804474	55804705	A5SS&ES	0.5	50	50	ENSMUST00000117236.8	ENSMUSG00000022214.16	Dcaf11	chr14	protein_coding	DDB1 and CUL4 associated factor 11
chr14	55797578;55798084	55797898;55798693	+	55797578	55798693	cassetteExon	0.5	100	100	ENSMUST00000147981.2	ENSMUSG00000022214.16	Dcaf11	chr14	protein_coding	DDB1 and CUL4 associated factor 11
chr14	55797578	55798532	+	55797578	55798693	A3SS	0.25	50	50	ENSMUST00000147981.2	ENSMUSG00000022214.16	Dcaf11	chr14	protein_coding	DDB1 and CUL4 associated factor 11
chr14	55797578	55798532	+	55797578	55797898	3pMXE	0.25	50	50	ENSMUST00000151245.2	ENSMUSG00000022214.16	Dcaf11	chr14	protein_coding	DDB1 and CUL4 associated factor 11
chr14	55797578	55798667	+	55797578	55797898	3pMXE	0.25	50	50	ENSMUST00000151245.2	ENSMUSG00000022214.16	Dcaf11	chr14	protein_coding	DDB1 and CUL4 associated factor 11
chr14	55797578	55798693	+	55797578	55797898	3pMXE	0.25	50	50	ENSMUST00000151245.2	ENSMUSG00000022214.16	Dcaf11	chr14	protein_coding	DDB1 and CUL4 associated factor 11
chr14	55797578	55798532	+	55797578;55798084	55797898;55798532	ES	0.25	50	50	ENSMUST00000133256.8	ENSMUSG00000022214.16	Dcaf11	chr14	protein_coding	DDB1 and CUL4 associated factor 11
chr14	55798084	55798667	+	55798084	55798532	A3SS	0.33	50	50	ENSMUST00000133256.8	ENSMUSG00000022214.16	Dcaf11	chr14	protein_coding	DDB1 and CUL4 associated factor 11
chr14	55798084	55798693	+	55798084	55798532	A3SS	0.33	50	50	ENSMUST00000133256.8	ENSMUSG00000022214.16	Dcaf11	chr14	protein_coding	DDB1 and CUL4 associated factor 11
chr14	55798275	55798532	+	55798084	55798532	A5SS	0.25	50	50	ENSMUST00000133256.8	ENSMUSG00000022214.16	Dcaf11	chr14	protein_coding	DDB1 and CUL4 associated factor 11
chr14	55798432	55798532	+	55798084	55798532	A5SS	0.25	50	50	ENSMUST00000133256.8	ENSMUSG00000022214.16	Dcaf11	chr14	protein_coding	DDB1 and CUL4 associated factor 11
chr14	55797578;55798275	55797898;55798532	+	55797578	55798532	cassetteExon	0.5	100	100	ENSMUST00000150019.8	ENSMUSG00000022214.16	Dcaf11	chr14	protein_coding	DDB1 and CUL4 associated factor 11
chr14	55798432	55798532	+	55797578	55798532	A5SS	0.25	50	50	ENSMUST00000150019.8	ENSMUSG00000022214.16	Dcaf11	chr14	protein_coding	DDB1 and CUL4 associated factor 11
chr14	55797578	55798532	+	55798275	55798532	5pMXE	0.25	50	50	ENSMUST00000127991.2	ENSMUSG00000022214.16	Dcaf11	chr14	protein_coding	DDB1 and CUL4 associated factor 11
chr14	55798432	55798532	+	55798275	55798532	A5SS	0.25	50	50	ENSMUST00000127991.2	ENSMUSG00000022214.16	Dcaf11	chr14	protein_coding	DDB1 and CUL4 associated factor 11
chr14	55797578	55798667	+	55798084	55798667	5pMXE	0.5	50	50	ENSMUST00000143431.2	ENSMUSG00000022214.16	Dcaf11	chr14	protein_coding	DDB1 and CUL4 associated factor 11
chr14	55798084	55798693	+	55798084	55798667	A3SS	0.33	50	50	ENSMUST00000143431.2	ENSMUSG00000022214.16	Dcaf11	chr14	protein_coding	DDB1 and CUL4 associated factor 11
chr14	55797578	55798693	+	55798084	55798693	5pMXE	0.5	50	50	ENSMUST00000150481.8	ENSMUSG00000022214.16	Dcaf11	chr14	protein_coding	DDB1 and CUL4 associated factor 11
chr14	55797578	55798532	+	55798084	55798532	5pMXE	0.25	50	50	ENSMUST00000152681.8	ENSMUSG00000022214.16	Dcaf11	chr14	protein_coding	DDB1 and CUL4 associated factor 11
chr14	55817884	55818201	+	55817884;55818120	55818052;55818201	ES	0.5	50	50	ENSMUST00000174484.8	ENSMUSG00000022216.18	Psme1	chr14	protein_coding	proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
chr14	55817084	55817261	+	55817084	55817228	A3SS	0.5	50	50	ENSMUST00000174484.8	ENSMUSG00000022216.18	Psme1	chr14	protein_coding	proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
chr14	55817616	55817739	+	55817616	55817787	A3SS	0.5	50	50	ENSMUST00000174484.8	ENSMUSG00000022216.18	Psme1	chr14	protein_coding	proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
chr14	55818120	55818240	+	55818120	55818201	A3SS	0.5	50	50	ENSMUST00000174484.8	ENSMUSG00000022216.18	Psme1	chr14	protein_coding	proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
chr14	55818433	55818509	+	55818429	55818509	A5SS	0.5	50	50	ENSMUST00000174484.8	ENSMUSG00000022216.18	Psme1	chr14	protein_coding	proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
chr14	55817884	55818201	+	55817884	55818052	3pMXE	0.5	50	50	ENSMUST00000172941.8	ENSMUSG00000022216.18	Psme1	chr14	protein_coding	proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
chr14	55819200;55819582	55819338;55822136	-	55819200	55822136	cassetteExon	0.5	100	100	ENSMUST00000174352.8	ENSMUSG00000022217.15	Emc9	chr14	protein_coding	ER membrane protein complex subunit 9
chr14	55827984	55828479	-	55827984	55828299	A5SS	0.5	50	50	ENSMUST00000161807.8	ENSMUSG00000079197.11	Psme2	chr14	protein_coding	proteasome (prosome, macropain) activator subunit 2 (PA28 beta)
chr14	55832758	55832930	+	55832758	55832927	A3SS	0.5	50	50	ENSMUST00000019443.15	ENSMUSG00000047098.19	Rnf31	chr14	protein_coding	ring finger protein 31
chr14	55833217	55833632	+	55833217	55833464	A3SS	0.5	50	50	ENSMUST00000019443.15	ENSMUSG00000047098.19	Rnf31	chr14	protein_coding	ring finger protein 31
chr14	55839212	55839338	+	55839212	55840713	A3SS	0.5	50	50	ENSMUST00000227708.2	ENSMUSG00000047098.19	Rnf31	chr14	protein_coding	ring finger protein 31
chr14	55840156	55840713	+	55839212	55840713	A5SS	0.5	50	50	ENSMUST00000227708.2	ENSMUSG00000047098.19	Rnf31	chr14	protein_coding	ring finger protein 31
chr14	55841700	55842509	+	55841700;55842010	55841925;55842509	ES	0.33	50	50	ENSMUST00000134863.8	ENSMUSG00000002325.16	Irf9	chr14	protein_coding	interferon regulatory factor 9
chr14	55842178	55842509	+	55842010	55842509	A5SS	0.33	50	50	ENSMUST00000134863.8	ENSMUSG00000002325.16	Irf9	chr14	protein_coding	interferon regulatory factor 9
chr14	55841700;55842178	55841925;55842509	+	55841700	55842509	cassetteExon	0.5	100	100	ENSMUST00000130697.8	ENSMUSG00000002325.16	Irf9	chr14	protein_coding	interferon regulatory factor 9
chr14	55841700	55842509	+	55842178	55842509	5pMXE	0.33	50	50	ENSMUST00000138037.2	ENSMUSG00000002325.16	Irf9	chr14	protein_coding	interferon regulatory factor 9
chr14	55863680	55864992	-	55863680;55864901	55864797;55864992	ES	0.5	50	50	ENSMUST00000047131.16	ENSMUSG00000002319.17	Ipo4	chr14	protein_coding	importin 4
chr14	55871651	55872462	-	55871651;55871866	55871737;55872462	ES	0.5	50	50	ENSMUST00000047131.16	ENSMUSG00000002319.17	Ipo4	chr14	protein_coding	importin 4
chr14	55863693	55864797	-	55863680	55864797	A3SS	0.5	50	50	ENSMUST00000047131.16	ENSMUSG00000002319.17	Ipo4	chr14	protein_coding	importin 4
chr14	55866141	55866251	-	55866096	55866251	A3SS	0.5	50	50	ENSMUST00000047131.16	ENSMUSG00000002319.17	Ipo4	chr14	protein_coding	importin 4
chr14	55863680	55863814	-	55863680	55864797	A5SS	0.33	50	50	ENSMUST00000047131.16	ENSMUSG00000002319.17	Ipo4	chr14	protein_coding	importin 4
chr14	55867546	55867658	-	55867546	55867752	A5SS	0.5	50	50	ENSMUST00000047131.16	ENSMUSG00000002319.17	Ipo4	chr14	protein_coding	importin 4
chr14	55863680	55863814	-	55863680	55864992	A5SS	0.33	50	50	ENSMUST00000155464.8	ENSMUSG00000002319.17	Ipo4	chr14	protein_coding	importin 4
chr14	55863680	55864992	-	55864901	55864992	3pMXE	0.5	50	50	ENSMUST00000126064.2	ENSMUSG00000002319.17	Ipo4	chr14	protein_coding	importin 4
chr14	55874069	55875367	-	55874069	55875316	5pMXE	0.5	50	50	ENSMUST00000156420.9	ENSMUSG00000115232.2	Gm49378	chr14	protein_coding	predicted gene, 49378
chr14	55880412	55880839	-	55880412	55880637	5pMXE	0.2	50	50	ENSMUST00000120041.8	ENSMUSG00000002320.16	Tm9sf1	chr14	protein_coding	transmembrane 9 superfamily member 1
chr14	55880412	55881054	-	55880412	55880637	5pMXE	0.2	50	50	ENSMUST00000120041.8	ENSMUSG00000002320.16	Tm9sf1	chr14	protein_coding	transmembrane 9 superfamily member 1
chr14	55875527	55877842	-	55875589	55877842	A3SS	0.33	50	50	ENSMUST00000120041.8	ENSMUSG00000002320.16	Tm9sf1	chr14	protein_coding	transmembrane 9 superfamily member 1
chr14	55875962	55877842	-	55875589	55877842	A3SS	0.33	50	50	ENSMUST00000120041.8	ENSMUSG00000002320.16	Tm9sf1	chr14	protein_coding	transmembrane 9 superfamily member 1
chr14	55878027	55878727	-	55878027	55878424	A5SS	0.5	50	50	ENSMUST00000120041.8	ENSMUSG00000002320.16	Tm9sf1	chr14	protein_coding	transmembrane 9 superfamily member 1
chr14	55880412	55880587	-	55880412	55880637	A5SS	0.2	50	50	ENSMUST00000120041.8	ENSMUSG00000002320.16	Tm9sf1	chr14	protein_coding	transmembrane 9 superfamily member 1
chr14	55880412	55880709	-	55880412	55880637	A5SS&ES	0.2	50	50	ENSMUST00000120041.8	ENSMUSG00000002320.16	Tm9sf1	chr14	protein_coding	transmembrane 9 superfamily member 1
chr14	55880206	55880839	-	55880412	55880839	A3SS	0.5	50	50	ENSMUST00000122358.8	ENSMUSG00000002320.16	Tm9sf1	chr14	protein_coding	transmembrane 9 superfamily member 1
chr14	55880412	55880587	-	55880412	55880839	A5SS	0.2	50	50	ENSMUST00000122358.8	ENSMUSG00000002320.16	Tm9sf1	chr14	protein_coding	transmembrane 9 superfamily member 1
chr14	55880412	55880709	-	55880412	55880839	A5SS	0.2	50	50	ENSMUST00000122358.8	ENSMUSG00000002320.16	Tm9sf1	chr14	protein_coding	transmembrane 9 superfamily member 1
chr14	55880412	55881054	-	55880412	55880839	A5SS	0.2	50	50	ENSMUST00000122358.8	ENSMUSG00000002320.16	Tm9sf1	chr14	protein_coding	transmembrane 9 superfamily member 1
chr14	55880412	55881054	-	55880412	55880709	5pMXE	0.2	50	50	ENSMUST00000121791.8	ENSMUSG00000002320.16	Tm9sf1	chr14	protein_coding	transmembrane 9 superfamily member 1
chr14	55880412	55880587	-	55880412	55880709	A5SS	0.2	50	50	ENSMUST00000121791.8	ENSMUSG00000002320.16	Tm9sf1	chr14	protein_coding	transmembrane 9 superfamily member 1
chr14	55875962	55877842	-	55875527	55877842	A3SS	0.33	50	50	ENSMUST00000149726.8	ENSMUSG00000002320.16	Tm9sf1	chr14	protein_coding	transmembrane 9 superfamily member 1
chr14	55880412	55880587	-	55880412	55881054	A5SS	0.2	50	50	ENSMUST00000138085.2	ENSMUSG00000002320.16	Tm9sf1	chr14	protein_coding	transmembrane 9 superfamily member 1
chr14	55888572	55888885	+	55888572	55888916	A3SS	0.25	50	50	ENSMUST00000007735.9	ENSMUSG00000007591.16	Tssk4	chr14	protein_coding	testis-specific serine kinase 4
chr14	55888572	55888928	+	55888572	55888916	A3SS	0.25	50	50	ENSMUST00000007735.9	ENSMUSG00000007591.16	Tssk4	chr14	protein_coding	testis-specific serine kinase 4
chr14	55888572	55888946	+	55888572	55888916	A3SS	0.25	50	50	ENSMUST00000007735.9	ENSMUSG00000007591.16	Tssk4	chr14	protein_coding	testis-specific serine kinase 4
chr14	55889309	55889650	+	55889309	55889576	A3SS	0.33	50	50	ENSMUST00000007735.9	ENSMUSG00000007591.16	Tssk4	chr14	protein_coding	testis-specific serine kinase 4
chr14	55889309	55889723	+	55889309	55889576	A3SS	0.33	50	50	ENSMUST00000007735.9	ENSMUSG00000007591.16	Tssk4	chr14	protein_coding	testis-specific serine kinase 4
chr14	55889309	55889650	+	55889309	55889723	A3SS	0.33	50	50	ENSMUST00000228395.2	ENSMUSG00000007591.16	Tssk4	chr14	protein_coding	testis-specific serine kinase 4
chr14	55888572	55888885	+	55888572	55888946	A3SS	0.25	50	50	ENSMUST00000226591.2	ENSMUSG00000007591.16	Tssk4	chr14	protein_coding	testis-specific serine kinase 4
chr14	55888572	55888928	+	55888572	55888946	A3SS	0.25	50	50	ENSMUST00000226591.2	ENSMUSG00000007591.16	Tssk4	chr14	protein_coding	testis-specific serine kinase 4
chr14	55888572	55888928	+	55888572	55888885	A3SS	0.25	50	50	ENSMUST00000227297.2	ENSMUSG00000007591.16	Tssk4	chr14	protein_coding	testis-specific serine kinase 4
chr14	55900082	55901269	-	55900082;55900954	55900872;55901269	ES	0.5	50	50	ENSMUST00000010520.10	ENSMUSG00000010376.16	Nedd8	chr14	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 8
chr14	55901378	55909252	-	55901316	55909252	A3SS	0.5	50	50	ENSMUST00000010520.10	ENSMUSG00000010376.16	Nedd8	chr14	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 8
chr14	55909949	55910163	+	55909841	55910163	A5SS	0.5	50	50	ENSMUST00000226735.2	ENSMUSG00000002326.7	Gmpr2	chr14	protein_coding	guanosine monophosphate reductase 2
chr14	55914738	55916971	-	55912362	55916971	A3SS	0.33	50	50	ENSMUST00000226819.2	ENSMUSG00000007589.10	Tinf2	chr14	protein_coding	Terf1 (TRF1)-interacting nuclear factor 2
chr14	55916866	55916971	-	55912362	55916971	A3SS	0.33	50	50	ENSMUST00000226819.2	ENSMUSG00000007589.10	Tinf2	chr14	protein_coding	Terf1 (TRF1)-interacting nuclear factor 2
chr14	55918164	55918457	-	55918164;55918359	55918252;55918457	ES	0.5	50	50	ENSMUST00000227842.2	ENSMUSG00000007589.10	Tinf2	chr14	protein_coding	Terf1 (TRF1)-interacting nuclear factor 2
chr14	55916866	55916971	-	55914738	55916971	A3SS	0.33	50	50	ENSMUST00000227842.2	ENSMUSG00000007589.10	Tinf2	chr14	protein_coding	Terf1 (TRF1)-interacting nuclear factor 2
chr14	55918768	55919021	-	55918768	55918847	A5SS	0.5	50	50	ENSMUST00000227842.2	ENSMUSG00000007589.10	Tinf2	chr14	protein_coding	Terf1 (TRF1)-interacting nuclear factor 2
chr14	55918164	55918457	-	55918359	55918457	A3SS	0.5	50	50	ENSMUST00000226641.2	ENSMUSG00000007589.10	Tinf2	chr14	protein_coding	Terf1 (TRF1)-interacting nuclear factor 2
chr14	55950211	55951231	-	55950211	55950745	5pMXE	0.2	50	50	ENSMUST00000168729.8	ENSMUSG00000022218.17	Tgm1	chr14	protein_coding	transglutaminase 1, K polypeptide
chr14	55950211	55950392	-	55950211	55950745	A5SS	0.2	50	50	ENSMUST00000168729.8	ENSMUSG00000022218.17	Tgm1	chr14	protein_coding	transglutaminase 1, K polypeptide
chr14	55950211	55950450	-	55950211	55950745	A5SS	0.2	50	50	ENSMUST00000168729.8	ENSMUSG00000022218.17	Tgm1	chr14	protein_coding	transglutaminase 1, K polypeptide
chr14	55950211	55950844	-	55950211	55950745	A5SS	0.2	50	50	ENSMUST00000168729.8	ENSMUSG00000022218.17	Tgm1	chr14	protein_coding	transglutaminase 1, K polypeptide
chr14	55950211	55950844	-	55950211	55950392	5pMXE	0.2	50	50	ENSMUST00000002389.9	ENSMUSG00000022218.17	Tgm1	chr14	protein_coding	transglutaminase 1, K polypeptide
chr14	55950211	55951231	-	55950211	55950392	5pMXE	0.2	50	50	ENSMUST00000002389.9	ENSMUSG00000022218.17	Tgm1	chr14	protein_coding	transglutaminase 1, K polypeptide
chr14	55950211	55950450	-	55950211	55950392	A5SS	0.2	50	50	ENSMUST00000002389.9	ENSMUSG00000022218.17	Tgm1	chr14	protein_coding	transglutaminase 1, K polypeptide
chr14	55950211	55951231	-	55950211	55950844	5pMXE	0.2	50	50	ENSMUST00000178034.9	ENSMUSG00000022218.17	Tgm1	chr14	protein_coding	transglutaminase 1, K polypeptide
chr14	55950211	55950450	-	55950211	55950844	A5SS	0.2	50	50	ENSMUST00000178034.9	ENSMUSG00000022218.17	Tgm1	chr14	protein_coding	transglutaminase 1, K polypeptide
chr14	55950211	55951231	-	55950211	55950450	5pMXE	0.2	50	50	ENSMUST00000226907.2	ENSMUSG00000022218.17	Tgm1	chr14	protein_coding	transglutaminase 1, K polypeptide
chr14	55959162	55959510	-	55959162;55959357	55959301;55959510	ES	0.5	50	50	ENSMUST00000227061.2	ENSMUSG00000040472.16	Rabggta	chr14	protein_coding	Rab geranylgeranyl transferase, a subunit
chr14	55959357	55959658	-	55959357	55959510	A5SS	0.5	50	50	ENSMUST00000227061.2	ENSMUSG00000040472.16	Rabggta	chr14	protein_coding	Rab geranylgeranyl transferase, a subunit
chr14	55959162	55959510	-	55959162	55959301	A5SS	0.5	50	50	ENSMUST00000169237.8	ENSMUSG00000040472.16	Rabggta	chr14	protein_coding	Rab geranylgeranyl transferase, a subunit
chr14	56021167	56021397	-	56021167	56021349	A5SS	0.33	50	50	ENSMUST00000170223.9	ENSMUSG00000022220.15	Adcy4	chr14	protein_coding	adenylate cyclase 4
chr14	56021167	56021477	-	56021167	56021349	A5SS	0.33	50	50	ENSMUST00000170223.9	ENSMUSG00000022220.15	Adcy4	chr14	protein_coding	adenylate cyclase 4
chr14	56021167	56021477	-	56021167	56021397	A5SS	0.33	50	50	ENSMUST00000002398.9	ENSMUSG00000022220.15	Adcy4	chr14	protein_coding	adenylate cyclase 4
chr14	56024617	56025281	-	56024617;56024896	56024739;56025281	ES	0.5	50	50	ENSMUST00000022830.14	ENSMUSG00000022221.15	Ripk3	chr14	protein_coding	receptor-interacting serine-threonine kinase 3
chr14	56025821	56026074	-	56025838	56026074	A3SS	0.33	50	50	ENSMUST00000022830.14	ENSMUSG00000022221.15	Ripk3	chr14	protein_coding	receptor-interacting serine-threonine kinase 3
chr14	56025919	56026074	-	56025838	56026074	A3SS	0.33	50	50	ENSMUST00000022830.14	ENSMUSG00000022221.15	Ripk3	chr14	protein_coding	receptor-interacting serine-threonine kinase 3
chr14	56025821	56026074	-	56025919	56026074	A3SS	0.33	50	50	ENSMUST00000168716.8	ENSMUSG00000022221.15	Ripk3	chr14	protein_coding	receptor-interacting serine-threonine kinase 3
chr14	56063318	56063615	+	56062593	56063615	A5SS	0.5	50	50	ENSMUST00000226979.2	ENSMUSG00000023411.13	Nfatc4	chr14	protein_coding	nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 4
chr14	56067406	56067913	+	56067523	56067913	A5SS	0.5	50	50	ENSMUST00000024179.6	ENSMUSG00000023411.13	Nfatc4	chr14	protein_coding	nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 4
chr14	56125474;56126055	56126006;56131449	+	56125474	56131449	cassetteExon	0.5	100	100	ENSMUST00000022831.5	ENSMUSG00000047153.5	Khnyn	chr14	protein_coding	KH and NYN domain containing
chr14	56131616	56131744	+	56131556	56131744	A5SS	0.5	50	50	ENSMUST00000022831.5	ENSMUSG00000047153.5	Khnyn	chr14	protein_coding	KH and NYN domain containing
chr14	56136762	56137271	-	56136762;56137186	56137104;56137271	ES	0.5	50	50	ENSMUST00000227211.2	ENSMUSG00000022223.10	Sdr39u1	chr14	protein_coding	short chain dehydrogenase/reductase family 39U, member 1
chr14	56135403	56135700	-	56134891	56135700	A3SS	0.33	50	50	ENSMUST00000227211.2	ENSMUSG00000022223.10	Sdr39u1	chr14	protein_coding	short chain dehydrogenase/reductase family 39U, member 1
chr14	56135469	56135700	-	56134891	56135700	A3SS	0.33	50	50	ENSMUST00000227211.2	ENSMUSG00000022223.10	Sdr39u1	chr14	protein_coding	short chain dehydrogenase/reductase family 39U, member 1
chr14	56135469	56136641	-	56135843	56136641	A3SS&ES	0.33	50	50	ENSMUST00000227211.2	ENSMUSG00000022223.10	Sdr39u1	chr14	protein_coding	short chain dehydrogenase/reductase family 39U, member 1
chr14	56135934	56136641	-	56135843	56136641	A3SS	0.33	50	50	ENSMUST00000227211.2	ENSMUSG00000022223.10	Sdr39u1	chr14	protein_coding	short chain dehydrogenase/reductase family 39U, member 1
chr14	56136762	56137177	-	56136762	56137104	A5SS	0.33	50	50	ENSMUST00000227211.2	ENSMUSG00000022223.10	Sdr39u1	chr14	protein_coding	short chain dehydrogenase/reductase family 39U, member 1
chr14	56135469	56136641	-	56135469;56135843	56135700;56136641	ES	0.33	50	50	ENSMUST00000111325.5	ENSMUSG00000022223.10	Sdr39u1	chr14	protein_coding	short chain dehydrogenase/reductase family 39U, member 1
chr14	56137377	56137725	-	56137377	56137647	5pMXE	0.33	50	50	ENSMUST00000111325.5	ENSMUSG00000022223.10	Sdr39u1	chr14	protein_coding	short chain dehydrogenase/reductase family 39U, member 1
chr14	56135403	56135700	-	56135469	56135700	A3SS	0.33	50	50	ENSMUST00000111325.5	ENSMUSG00000022223.10	Sdr39u1	chr14	protein_coding	short chain dehydrogenase/reductase family 39U, member 1
chr14	56137377	56137484	-	56137377	56137647	A5SS	0.33	50	50	ENSMUST00000111325.5	ENSMUSG00000022223.10	Sdr39u1	chr14	protein_coding	short chain dehydrogenase/reductase family 39U, member 1
chr14	56135469	56136641	-	56135469;56135934	56135700;56136641	ES	0.33	50	50	ENSMUST00000227032.2	ENSMUSG00000022223.10	Sdr39u1	chr14	protein_coding	short chain dehydrogenase/reductase family 39U, member 1
chr14	56137377	56137725	-	56137377	56137484	5pMXE	0.33	50	50	ENSMUST00000227163.2	ENSMUSG00000022223.10	Sdr39u1	chr14	protein_coding	short chain dehydrogenase/reductase family 39U, member 1
chr14	56136762;56137186	56137177;56137271	-	56136762	56137271	cassetteExon	0.5	100	100	ENSMUST00000227712.2	ENSMUSG00000022223.10	Sdr39u1	chr14	protein_coding	short chain dehydrogenase/reductase family 39U, member 1
chr14	56135469	56136641	-	56135934	56136641	3pMXE	0.33	50	50	ENSMUST00000227965.2	ENSMUSG00000022223.10	Sdr39u1	chr14	protein_coding	short chain dehydrogenase/reductase family 39U, member 1
chr14	56136762	56137271	-	56136762	56137104	A5SS	0.33	50	50	ENSMUST00000226338.2	ENSMUSG00000022223.10	Sdr39u1	chr14	protein_coding	short chain dehydrogenase/reductase family 39U, member 1
chr14	56189242	56189744	-	56188647	56189744	A3SS	0.5	50	50	ENSMUST00000228879.2	ENSMUSG00000115592.2	Mcpt-ps1	chr14	transcribed_unprocessed_pseudogene	mast cell protease, pseudogene 1
chr14	56187643	56188084	-	56187643	56188055	A5SS	0.5	50	50	ENSMUST00000228879.2	ENSMUSG00000115592.2	Mcpt-ps1	chr14	transcribed_unprocessed_pseudogene	mast cell protease, pseudogene 1
chr14	56188309	56188505	-	56188309	56188573	A5SS	0.5	50	50	ENSMUST00000228879.2	ENSMUSG00000115592.2	Mcpt-ps1	chr14	transcribed_unprocessed_pseudogene	mast cell protease, pseudogene 1
chr14	56209625	56210155	+	56188552	56210155	A5SS	0.5	50	50	ENSMUST00000228263.2	ENSMUSG00000068289.7	Cma2	chr14	protein_coding	chymase 2, mast cell
chr14	56320944	56321174	-	56320944	56321260	A5SS	0.5	50	50	ENSMUST00000015594.9	ENSMUSG00000022157.9	Mcpt8	chr14	protein_coding	mast cell protease 8
chr14	56337607	56338431	-	56337607;56338254	56338000;56338431	ES	0.5	50	50	ENSMUST00000015583.2	ENSMUSG00000040314.3	Ctsg	chr14	protein_coding	cathepsin G
chr14	56403504	56404199	-	56403504	56404233	A5SS	0.5	50	50	ENSMUST00000015587.9	ENSMUSG00000015443.10	Gzmn	chr14	protein_coding	granzyme N
chr14	56697581	56700481	+	56697581;56699527	56699338;56700481	ES	0.5	50	50	ENSMUST00000095793.3	ENSMUSG00000000365.10	Rnf17	chr14	protein_coding	ring finger protein 17
chr14	56724534	56726768	+	56724534	56730575	A3SS	0.5	50	50	ENSMUST00000095793.3	ENSMUSG00000000365.10	Rnf17	chr14	protein_coding	ring finger protein 17
chr14	56688348	56697423	+	56679077	56697423	A5SS	0.5	50	50	ENSMUST00000095793.3	ENSMUSG00000000365.10	Rnf17	chr14	protein_coding	ring finger protein 17
chr14	56749784	56751493	+	56749784	56759831	A3SS	0.5	50	50	ENSMUST00000225737.2	ENSMUSG00000000365.10	Rnf17	chr14	protein_coding	ring finger protein 17
chr14	56753928	56759831	+	56749784	56759831	A5SS	0.5	50	50	ENSMUST00000225737.2	ENSMUSG00000000365.10	Rnf17	chr14	protein_coding	ring finger protein 17
chr14	56787013	56789380	-	56787034	56789380	A3SS	0.5	50	50	ENSMUST00000065302.8	ENSMUSG00000064128.9	Cenpj	chr14	protein_coding	centromere protein J
chr14	56848794	56851142	-	56848794;56849196	56849130;56851142	ES	0.5	50	50	ENSMUST00000160334.8	ENSMUSG00000090038.8	Gm16573	chr14	lncRNA	predicted gene 16573
chr14	56855095	56857811	-	56851238	56857811	A3SS	0.5	50	50	ENSMUST00000160334.8	ENSMUSG00000090038.8	Gm16573	chr14	lncRNA	predicted gene 16573
chr14	56903395	56905281	-	56903395	56905385	A5SS	0.5	50	50	ENSMUST00000211600.2	ENSMUSG00000110165.2	Btf3-ps18	chr14	transcribed_processed_pseudogene	basic transcription factor 3, pseudogene 18
chr14	56931035	56933126	+	56931035	56933078	A3SS	0.5	50	50	ENSMUST00000116468.2	ENSMUSG00000079184.11	Mphosph8	chr14	protein_coding	M-phase phosphoprotein 8
chr14	57001701	57015248	-	57001701;57009463	57009162;57015248	ES	0.5	50	50	ENSMUST00000022507.13	ENSMUSG00000021938.13	Pspc1	chr14	protein_coding	paraspeckle protein 1
chr14	57042320	57049049	-	57042320;57048053	57047998;57049049	ES	0.33	50	50	ENSMUST00000039812.16	ENSMUSG00000040123.18	Zmym5	chr14	protein_coding	zinc finger, MYM-type 5
chr14	57042320;57048316	57048197;57049049	-	57042320;57048053	57047998;57049049	MXE	0.5	100	100	ENSMUST00000039812.16	ENSMUSG00000040123.18	Zmym5	chr14	protein_coding	zinc finger, MYM-type 5
chr14	57034267	57035142	-	57034267	57035125	A5SS	0.5	50	50	ENSMUST00000039812.16	ENSMUSG00000040123.18	Zmym5	chr14	protein_coding	zinc finger, MYM-type 5
chr14	57048316	57049049	-	57048316	57048791	5pMXE	0.5	50	50	ENSMUST00000173954.3	ENSMUSG00000040123.18	Zmym5	chr14	protein_coding	zinc finger, MYM-type 5
chr14	57042320	57047998	-	57042320	57048197	A5SS	0.5	50	50	ENSMUST00000173954.3	ENSMUSG00000040123.18	Zmym5	chr14	protein_coding	zinc finger, MYM-type 5
chr14	57042320	57049049	-	57042320;57048316	57048197;57049049	ES	0.33	50	50	ENSMUST00000111285.9	ENSMUSG00000040123.18	Zmym5	chr14	protein_coding	zinc finger, MYM-type 5
chr14	57042320;57048316	57047998;57049049	-	57042320	57049049	cassetteExon	0.5	100	100	ENSMUST00000225699.2	ENSMUSG00000040123.18	Zmym5	chr14	protein_coding	zinc finger, MYM-type 5
chr14	57181694;57182216	57182143;57183948	+	57181694	57183948	cassetteExon	0.5	100	100	ENSMUST00000022511.10	ENSMUSG00000021945.10	Zmym2	chr14	protein_coding	zinc finger, MYM-type 2
chr14	57187785	57193683	+	57187785	57193637	A3SS	0.5	50	50	ENSMUST00000022511.10	ENSMUSG00000021945.10	Zmym2	chr14	protein_coding	zinc finger, MYM-type 2
chr14	57158252	57158959	+	57158194	57158959	A5SS	0.5	50	50	ENSMUST00000022511.10	ENSMUSG00000021945.10	Zmym2	chr14	protein_coding	zinc finger, MYM-type 2
chr14	57180813	57181523	+	57180825	57181523	A5SS	0.5	50	50	ENSMUST00000022511.10	ENSMUSG00000021945.10	Zmym2	chr14	protein_coding	zinc finger, MYM-type 2
chr14	57274387	57294984	-	57274387	57295263	A5SS	0.5	50	50	ENSMUST00000061614.8	ENSMUSG00000048582.8	Gja3	chr14	protein_coding	gap junction protein, alpha 3
chr14	57362273	57368166	-	57362273	57368257	A5SS	0.5	50	50	ENSMUST00000039380.9	ENSMUSG00000040055.10	Gjb6	chr14	protein_coding	gap junction protein, beta 6
chr14	57368421	57369444	-	57368421	57370643	A5SS	0.5	50	50	ENSMUST00000039380.9	ENSMUSG00000040055.10	Gjb6	chr14	protein_coding	gap junction protein, beta 6
chr14	57600505	57635865	-	57600505;57620322	57620215;57635865	ES	0.5	50	50	ENSMUST00000022517.9	ENSMUSG00000021947.12	Cryl1	chr14	protein_coding	crystallin, lambda 1
chr14	57550586;57590197	57590093;57600379	-	57550586	57600379	cassetteExon	0.5	100	100	ENSMUST00000022517.9	ENSMUSG00000021947.12	Cryl1	chr14	protein_coding	crystallin, lambda 1
chr14	57579655	57600379	-	57550586	57600379	A3SS	0.33	50	50	ENSMUST00000022517.9	ENSMUSG00000021947.12	Cryl1	chr14	protein_coding	crystallin, lambda 1
chr14	57579655	57600379	-	57590197	57600379	A3SS&ES	0.33	50	50	ENSMUST00000223986.2	ENSMUSG00000021947.12	Cryl1	chr14	protein_coding	crystallin, lambda 1
chr14	57672314	57675699	+	57672314;57674740	57674684;57675699	ES	0.5	50	50	ENSMUST00000122063.8	ENSMUSG00000040040.17	Ift88	chr14	protein_coding	intraflagellar transport 88
chr14	57693004	57713500	+	57693004;57710531	57710432;57713500	ES	0.5	50	50	ENSMUST00000122063.8	ENSMUSG00000040040.17	Ift88	chr14	protein_coding	intraflagellar transport 88
chr14	57672314	57674634	+	57672314	57674684	A3SS	0.33	50	50	ENSMUST00000122063.8	ENSMUSG00000040040.17	Ift88	chr14	protein_coding	intraflagellar transport 88
chr14	57672314	57675699	+	57672314;57674740	57674634;57675699	ES	0.5	50	50	ENSMUST00000150296.8	ENSMUSG00000040040.17	Ift88	chr14	protein_coding	intraflagellar transport 88
chr14	57803541	57807320	-	57803541	57809000	A5SS	0.5	50	50	ENSMUST00000239099.2	ENSMUSG00000021951.8	Eef1akmt1	chr14	protein_coding	EEF1A alpha lysine methyltransferase 1
chr14	57885981	57933577	-	57885981	57902345	5pMXE	0.5	50	50	ENSMUST00000174545.9	ENSMUSG00000021952.17	Xpo4	chr14	protein_coding	exportin 4
chr14	57880680;57880946	57880792;57885876	-	57880680	57885876	cassetteExon	0.5	100	100	ENSMUST00000174545.9	ENSMUSG00000021952.17	Xpo4	chr14	protein_coding	exportin 4
chr14	57879617	57880539	-	57875814	57880539	A3SS	0.5	50	50	ENSMUST00000174545.9	ENSMUSG00000021952.17	Xpo4	chr14	protein_coding	exportin 4
chr14	57971875	57983983	-	57971875	57983347	5pMXE	0.25	50	50	ENSMUST00000174694.8	ENSMUSG00000114942.2	Gm49361	chr14	protein_coding	predicted gene, 49361
chr14	57971875	57995710	-	57971875	57983347	5pMXE	0.25	50	50	ENSMUST00000174694.8	ENSMUSG00000114942.2	Gm49361	chr14	protein_coding	predicted gene, 49361
chr14	57940511;57962278	57962031;57971335	-	57940511	57971335	cassetteExon	0.5	100	100	ENSMUST00000174694.8	ENSMUSG00000114942.2	Gm49361	chr14	protein_coding	predicted gene, 49361
chr14	57931877	57933577	-	57885981	57933577	A3SS	0.5	50	50	ENSMUST00000174694.8	ENSMUSG00000114942.2	Gm49361	chr14	protein_coding	predicted gene, 49361
chr14	57960008	57971335	-	57940511	57971335	A3SS	0.25	50	50	ENSMUST00000174694.8	ENSMUSG00000114942.2	Gm49361	chr14	protein_coding	predicted gene, 49361
chr14	57960303	57971335	-	57940511	57971335	A3SS	0.25	50	50	ENSMUST00000174694.8	ENSMUSG00000114942.2	Gm49361	chr14	protein_coding	predicted gene, 49361
chr14	57934955	57936754	-	57934955	57936715	A5SS	0.5	50	50	ENSMUST00000174694.8	ENSMUSG00000114942.2	Gm49361	chr14	protein_coding	predicted gene, 49361
chr14	57971875	57982049	-	57971875	57983347	A5SS	0.25	50	50	ENSMUST00000174694.8	ENSMUSG00000114942.2	Gm49361	chr14	protein_coding	predicted gene, 49361
chr14	57960008	57971335	-	57962278	57971335	A3SS&ES	0.25	50	50	ENSMUST00000174213.8	ENSMUSG00000021959.17	Lats2	chr14	protein_coding	large tumor suppressor 2
chr14	57960303	57971335	-	57962278	57971335	A3SS&ES	0.25	50	50	ENSMUST00000174213.8	ENSMUSG00000021959.17	Lats2	chr14	protein_coding	large tumor suppressor 2
chr14	57971875	57982049	-	57971875	57995710	A5SS	0.25	50	50	ENSMUST00000174166.2	ENSMUSG00000021959.17	Lats2	chr14	protein_coding	large tumor suppressor 2
chr14	57971875	57983983	-	57971875	57995710	A5SS	0.25	50	50	ENSMUST00000174166.2	ENSMUSG00000021959.17	Lats2	chr14	protein_coding	large tumor suppressor 2
chr14	57960008	57971335	-	57960008;57960303	57960157;57971335	ES	0.33	50	50	ENSMUST00000038381.14	ENSMUSG00000021959.17	Lats2	chr14	protein_coding	large tumor suppressor 2
chr14	57971875	57983983	-	57971875	57982049	5pMXE	0.25	50	50	ENSMUST00000173732.2	ENSMUSG00000021959.17	Lats2	chr14	protein_coding	large tumor suppressor 2
chr14	58036054	58042215	+	58036054	58038951	A3SS&ES	0.5	50	50	ENSMUST00000128764.9	ENSMUSG00000021963.18	Sap18	chr14	protein_coding	Sin3-associated polypeptide 18
chr14	58036217	58038951	+	58036054	58038951	A5SS	0.33	50	50	ENSMUST00000128764.9	ENSMUSG00000021963.18	Sap18	chr14	protein_coding	Sin3-associated polypeptide 18
chr14	58036221	58038951	+	58036054	58038951	A5SS	0.33	50	50	ENSMUST00000128764.9	ENSMUSG00000021963.18	Sap18	chr14	protein_coding	Sin3-associated polypeptide 18
chr14	58036217	58038951	+	58036221	58038951	A5SS	0.33	50	50	ENSMUST00000111268.8	ENSMUSG00000021963.18	Sap18	chr14	protein_coding	Sin3-associated polypeptide 18
chr14	58060419;58060598	58060532;58063467	-	58060419	58063467	cassetteExon	0.5	100	100	ENSMUST00000022536.3	ENSMUSG00000021965.4	Ska3	chr14	protein_coding	spindle and kinetochore associated complex subunit 3
chr14	58047600	58048981	-	58047600	58049037	A5SS	0.5	50	50	ENSMUST00000022536.3	ENSMUSG00000021965.4	Ska3	chr14	protein_coding	spindle and kinetochore associated complex subunit 3
chr14	58074103	58076547	-	58074103;58075124	58075048;58076547	ES	0.5	50	50	ENSMUST00000089473.5	ENSMUSG00000021969.9	Zdhhc20	chr14	protein_coding	zinc finger, DHHC domain containing 20
chr14	58076662;58077052	58077008;58078286	-	58076662	58078286	cassetteExon	0.5	100	100	ENSMUST00000089473.5	ENSMUSG00000021969.9	Zdhhc20	chr14	protein_coding	zinc finger, DHHC domain containing 20
chr14	58084519;58087637	58087602;58094067	-	58084519	58094067	cassetteExon	0.5	100	100	ENSMUST00000089473.5	ENSMUSG00000021969.9	Zdhhc20	chr14	protein_coding	zinc finger, DHHC domain containing 20
chr14	58169760;58170186	58170164;58181045	-	58169760	58181045	cassetteExon	0.5	100	100	ENSMUST00000022543.10	ENSMUSG00000021973.10	Micu2	chr14	protein_coding	mitochondrial calcium uptake 2
chr14	58169760;58176139	58176073;58181045	-	58169760	58181045	cassetteExon	0.5	100	100	ENSMUST00000022543.10	ENSMUSG00000021973.10	Micu2	chr14	protein_coding	mitochondrial calcium uptake 2
chr14	58169760;58170186	58170164;58181045	-	58169760;58176139	58176073;58181045	MXE	0.5	100	100	ENSMUST00000224607.2	ENSMUSG00000021973.10	Micu2	chr14	protein_coding	mitochondrial calcium uptake 2
chr14	58236919;58239876	58239767;58240437	+	58236919	58240437	cassetteExon	0.5	100	100	ENSMUST00000180534.3	ENSMUSG00000097303.3	3110083C13Rik	chr14	lncRNA	RIKEN cDNA 3110083C13 gene
chr14	58310789	58320658	+	58308104	58320658	A5SS	0.25	50	50	ENSMUST00000165526.9	ENSMUSG00000021974.16	Fgf9	chr14	protein_coding	fibroblast growth factor 9
chr14	58312823	58320658	+	58308104	58320658	A5SS	0.25	50	50	ENSMUST00000165526.9	ENSMUSG00000021974.16	Fgf9	chr14	protein_coding	fibroblast growth factor 9
chr14	58314120	58320658	+	58308104	58320658	A5SS	0.25	50	50	ENSMUST00000165526.9	ENSMUSG00000021974.16	Fgf9	chr14	protein_coding	fibroblast growth factor 9
chr14	58312823	58320658	+	58310789	58320658	A5SS	0.25	50	50	ENSMUST00000022545.14	ENSMUSG00000021974.16	Fgf9	chr14	protein_coding	fibroblast growth factor 9
chr14	58314120	58320658	+	58310789	58320658	A5SS	0.25	50	50	ENSMUST00000022545.14	ENSMUSG00000021974.16	Fgf9	chr14	protein_coding	fibroblast growth factor 9
chr14	58314120	58320658	+	58312823	58320658	A5SS	0.25	50	50	ENSMUST00000074654.12	ENSMUSG00000021974.16	Fgf9	chr14	protein_coding	fibroblast growth factor 9
chr14	58539840	58600571	+	58539840	58540656	3pMXE	0.5	50	50	ENSMUST00000224843.2	ENSMUSG00000114690.2	Gm33321	chr14	lncRNA	predicted gene, 33321
chr14	58538502	58539704	+	58538593	58539704	A5SS	0.5	50	50	ENSMUST00000224843.2	ENSMUSG00000114690.2	Gm33321	chr14	lncRNA	predicted gene, 33321
chr14	59287967	59297936	-	59281849	59297936	A3SS	0.5	50	50	ENSMUST00000224588.2	ENSMUSG00000114441.2	Gm33472	chr14	lncRNA	predicted gene, 33472
chr14	59298097	59298295	-	59298100	59298295	A3SS	0.5	50	50	ENSMUST00000224588.2	ENSMUSG00000114441.2	Gm33472	chr14	lncRNA	predicted gene, 33472
chr14	59281849	59282954	-	59281849	59297936	A5SS	0.5	50	50	ENSMUST00000224588.2	ENSMUSG00000114441.2	Gm33472	chr14	lncRNA	predicted gene, 33472
chr14	59377551	59379907	-	59377551;59379642	59379562;59379907	ES	0.5	50	50	ENSMUST00000022548.10	ENSMUSG00000021977.12	1700129C05Rik	chr14	protein_coding	RIKEN cDNA 1700129C05 gene
chr14	59378884	59379562	-	59377551	59379562	A3SS	0.5	50	50	ENSMUST00000022548.10	ENSMUSG00000021977.12	1700129C05Rik	chr14	protein_coding	RIKEN cDNA 1700129C05 gene
chr14	59455211	59460642	+	59455211;59459024	59458866;59460642	ES	0.5	50	50	ENSMUST00000173547.8	ENSMUSG00000035469.18	Rcbtb1	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
chr14	59455211	59459067	+	59455211	59458866	A3SS&ES	0.33	50	50	ENSMUST00000173547.8	ENSMUSG00000035469.18	Rcbtb1	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
chr14	59439033	59447374	+	59438753	59447374	A5SS	0.25	50	50	ENSMUST00000173547.8	ENSMUSG00000035469.18	Rcbtb1	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
chr14	59444379	59447374	+	59438753	59447374	A5SS	0.25	50	50	ENSMUST00000173547.8	ENSMUSG00000035469.18	Rcbtb1	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
chr14	59447259	59447374	+	59438753	59447374	A5SS	0.25	50	50	ENSMUST00000173547.8	ENSMUSG00000035469.18	Rcbtb1	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
chr14	59454114	59455045	+	59448034	59455045	A5SS	0.5	50	50	ENSMUST00000173547.8	ENSMUSG00000035469.18	Rcbtb1	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
chr14	59439033;59447259	59447192;59447374	+	59439033	59447374	cassetteExon	0.5	100	100	ENSMUST00000043227.13	ENSMUSG00000035469.18	Rcbtb1	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
chr14	59439033	59443074	+	59439033	59447374	A3SS	0.33	50	50	ENSMUST00000043227.13	ENSMUSG00000035469.18	Rcbtb1	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
chr14	59460749	59474123	+	59460749	59462082	A3SS&ES	0.5	50	50	ENSMUST00000043227.13	ENSMUSG00000035469.18	Rcbtb1	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
chr14	59444379	59447374	+	59439033	59447374	A5SS	0.25	50	50	ENSMUST00000043227.13	ENSMUSG00000035469.18	Rcbtb1	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
chr14	59439033	59447192	+	59439033	59443074	A3SS&ES	0.33	50	50	ENSMUST00000174009.8	ENSMUSG00000035469.18	Rcbtb1	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
chr14	59443171	59444213	+	59443171	59447466	A3SS	0.33	50	50	ENSMUST00000174009.8	ENSMUSG00000035469.18	Rcbtb1	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
chr14	59443171	59444253	+	59443171	59447466	A3SS	0.33	50	50	ENSMUST00000174009.8	ENSMUSG00000035469.18	Rcbtb1	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
chr14	59444379	59447374	+	59447259	59447374	A5SS&ES	0.25	50	50	ENSMUST00000022551.14	ENSMUSG00000035469.18	Rcbtb1	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
chr14	59439033;59447259	59447192;59447374	+	59439033;59444379	59443074;59447374	MXE	0.5	100	100	ENSMUST00000140136.9	ENSMUSG00000035469.18	Rcbtb1	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
chr14	59443171	59444253	+	59443171	59444213	A3SS	0.5	50	50	ENSMUST00000140136.9	ENSMUSG00000035469.18	Rcbtb1	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
chr14	59444379	59447377	+	59444379	59447374	A3SS	0.5	50	50	ENSMUST00000140136.9	ENSMUSG00000035469.18	Rcbtb1	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
chr14	59455211	59460642	+	59455211	59459067	3pMXE	0.25	50	50	ENSMUST00000095778.8	ENSMUSG00000035469.18	Rcbtb1	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
chr14	59455211	59463757	+	59455211	59459067	3pMXE	0.25	50	50	ENSMUST00000095778.8	ENSMUSG00000035469.18	Rcbtb1	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
chr14	59455211	59458866	+	59455211	59463757	A3SS	0.25	50	50	ENSMUST00000172810.2	ENSMUSG00000035469.18	Rcbtb1	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
chr14	59455211	59460642	+	59455211	59463757	A3SS	0.25	50	50	ENSMUST00000172810.2	ENSMUSG00000035469.18	Rcbtb1	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
chr14	59462224	59463757	+	59455211	59463757	A5SS	0.5	50	50	ENSMUST00000172810.2	ENSMUSG00000035469.18	Rcbtb1	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
chr14	59586837	59590767	-	59586837	59588596	A5SS&ES	0.5	50	50	ENSMUST00000161754.2	ENSMUSG00000068245.15	Phf11d	chr14	protein_coding	PHD finger protein 11D
chr14	59590231	59590767	-	59586837	59590767	A3SS	0.5	50	50	ENSMUST00000160425.8	ENSMUSG00000068245.15	Phf11d	chr14	protein_coding	PHD finger protein 11D
chr14	59668717	59678036	-	59668717;59675214	59674886;59678036	ES	0.5	50	50	ENSMUST00000161459.8	ENSMUSG00000071350.13	Setdb2	chr14	protein_coding	SET domain, bifurcated 2
chr14	59660933	59662134	-	59660933	59663938	A5SS	0.5	50	50	ENSMUST00000161459.8	ENSMUSG00000071350.13	Setdb2	chr14	protein_coding	SET domain, bifurcated 2
chr14	59678467	59696543	+	59681779	59696543	A5SS&ES	0.5	50	50	ENSMUST00000225149.2	ENSMUSG00000021981.11	Cab39l	chr14	protein_coding	calcium binding protein 39-like
chr14	59699151	59715481	+	59699151	59734252	A3SS	0.5	50	50	ENSMUST00000224281.2	ENSMUSG00000021981.11	Cab39l	chr14	protein_coding	calcium binding protein 39-like
chr14	59716633	59734252	+	59699151	59734252	A5SS	0.5	50	50	ENSMUST00000224281.2	ENSMUSG00000021981.11	Cab39l	chr14	protein_coding	calcium binding protein 39-like
chr14	59776654	59822953	+	59776654	59784435	3pMXE	0.5	50	50	ENSMUST00000022553.6	ENSMUSG00000021981.11	Cab39l	chr14	protein_coding	calcium binding protein 39-like
chr14	59798370	59806397	-	59798370;59802044	59801967;59806397	ES	0.25	50	50	ENSMUST00000225839.2	ENSMUSG00000021982.15	Cdadc1	chr14	protein_coding	cytidine and dCMP deaminase domain containing 1
chr14	59798405	59806397	-	59802044	59806397	A3SS&ES	0.25	50	50	ENSMUST00000225839.2	ENSMUSG00000021982.15	Cdadc1	chr14	protein_coding	cytidine and dCMP deaminase domain containing 1
chr14	59805487	59806397	-	59802044	59806397	A3SS	0.25	50	50	ENSMUST00000225839.2	ENSMUSG00000021982.15	Cdadc1	chr14	protein_coding	cytidine and dCMP deaminase domain containing 1
chr14	59834408	59835236	-	59834408	59835204	A5SS	0.5	50	50	ENSMUST00000225839.2	ENSMUSG00000021982.15	Cdadc1	chr14	protein_coding	cytidine and dCMP deaminase domain containing 1
chr14	59798370	59806397	-	59798405	59806397	A3SS	0.25	50	50	ENSMUST00000167100.9	ENSMUSG00000021982.15	Cdadc1	chr14	protein_coding	cytidine and dCMP deaminase domain containing 1
chr14	59805487	59806397	-	59798405	59806397	A3SS	0.25	50	50	ENSMUST00000167100.9	ENSMUSG00000021982.15	Cdadc1	chr14	protein_coding	cytidine and dCMP deaminase domain containing 1
chr14	59805487	59806397	-	59798370	59806397	A3SS	0.25	50	50	ENSMUST00000022555.11	ENSMUSG00000021982.15	Cdadc1	chr14	protein_coding	cytidine and dCMP deaminase domain containing 1
chr14	59798370	59806397	-	59802044	59806397	3pMXE	0.25	50	50	ENSMUST00000056997.15	ENSMUSG00000021982.15	Cdadc1	chr14	protein_coding	cytidine and dCMP deaminase domain containing 1
chr14	59865190	59867084	+	59863849	59867084	A5SS	0.5	50	50	ENSMUST00000053949.7	ENSMUSG00000044461.7	Shisa2	chr14	protein_coding	shisa family member 2
chr14	60274486	60281766	-	60274486;60276496	60276423;60281766	ES	0.33	50	50	ENSMUST00000080368.13	ENSMUSG00000021983.17	Atp8a2	chr14	protein_coding	ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
chr14	60280989	60281766	-	60276496	60281766	A3SS	0.33	50	50	ENSMUST00000080368.13	ENSMUSG00000021983.17	Atp8a2	chr14	protein_coding	ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
chr14	60280989	60281766	-	60274486	60281766	A3SS	0.33	50	50	ENSMUST00000145071.8	ENSMUSG00000021983.17	Atp8a2	chr14	protein_coding	ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
chr14	60424200	60434435	-	60324175	60434435	A3SS	0.5	50	50	ENSMUST00000131670.3	ENSMUSG00000021983.17	Atp8a2	chr14	protein_coding	ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
chr14	60324175	60324528	-	60324175	60434435	A5SS	0.33	50	50	ENSMUST00000131670.3	ENSMUSG00000021983.17	Atp8a2	chr14	protein_coding	ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
chr14	60324175	60414761	-	60324175	60434435	A5SS	0.33	50	50	ENSMUST00000131670.3	ENSMUSG00000021983.17	Atp8a2	chr14	protein_coding	ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
chr14	60324175	60324528	-	60324175	60414761	A5SS	0.33	50	50	ENSMUST00000140924.3	ENSMUSG00000021983.17	Atp8a2	chr14	protein_coding	ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
chr14	60424200	60459032	-	60424200	60434435	5pMXE	0.5	50	50	ENSMUST00000152688.2	ENSMUSG00000021983.17	Atp8a2	chr14	protein_coding	ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
chr14	60325723	60333330	+	60325723	60333393	A3SS	0.5	50	50	ENSMUST00000149364.2	ENSMUSG00000086112.2	4930563I02Rik	chr14	lncRNA	RIKEN cDNA 4930563I02 gene
chr14	60443401	60459032	-	60424200	60459032	A3SS	0.33	50	50	ENSMUST00000225805.2	ENSMUSG00000063895.8	Nupl1	chr14	protein_coding	nucleoporin like 1
chr14	60457607	60459032	-	60424200	60459032	A3SS	0.33	50	50	ENSMUST00000225805.2	ENSMUSG00000063895.8	Nupl1	chr14	protein_coding	nucleoporin like 1
chr14	60470114	60470353	-	60470114	60471679	A5SS	0.5	50	50	ENSMUST00000225805.2	ENSMUSG00000063895.8	Nupl1	chr14	protein_coding	nucleoporin like 1
chr14	60457607	60459032	-	60443401	60459032	A3SS	0.33	50	50	ENSMUST00000225311.2	ENSMUSG00000114797.2	Gm49336	chr14	protein_coding	predicted gene, 49336
chr14	60502810;60507998	60507808;60514578	+	60502810	60514578	cassetteExon	0.5	100	100	ENSMUST00000022563.9	ENSMUSG00000021987.10	Mtmr6	chr14	protein_coding	myotubularin related protein 6
chr14	60527126;60528268	60528155;60529443	+	60527126	60529443	cassetteExon	0.5	100	100	ENSMUST00000022563.9	ENSMUSG00000021987.10	Mtmr6	chr14	protein_coding	myotubularin related protein 6
chr14	60610763;60613996	60613919;60615121	+	60610763	60615121	cassetteExon	0.5	100	100	ENSMUST00000225247.3	ENSMUSG00000021986.10	Amer2	chr14	protein_coding	APC membrane recruitment 2
chr14	60871784	60928303	+	60871632	60928303	A5SS	0.25	50	50	ENSMUST00000159169.2	ENSMUSG00000021990.17	Spata13	chr14	protein_coding	spermatogenesis associated 13
chr14	60872313	60928303	+	60871632	60928303	A5SS	0.25	50	50	ENSMUST00000159169.2	ENSMUSG00000021990.17	Spata13	chr14	protein_coding	spermatogenesis associated 13
chr14	60874095	60928303	+	60871632	60928303	A5SS	0.25	50	50	ENSMUST00000159169.2	ENSMUSG00000021990.17	Spata13	chr14	protein_coding	spermatogenesis associated 13
chr14	60929997	60946874	+	60929997;60944528	60944163;60946874	ES	0.33	50	50	ENSMUST00000160973.8	ENSMUSG00000021990.17	Spata13	chr14	protein_coding	spermatogenesis associated 13
chr14	60872313	60928303	+	60871784	60928303	A5SS	0.25	50	50	ENSMUST00000160973.8	ENSMUSG00000021990.17	Spata13	chr14	protein_coding	spermatogenesis associated 13
chr14	60874095	60928303	+	60871784	60928303	A5SS	0.25	50	50	ENSMUST00000160973.8	ENSMUSG00000021990.17	Spata13	chr14	protein_coding	spermatogenesis associated 13
chr14	60940571	60944163	+	60929997	60944163	A5SS	0.5	50	50	ENSMUST00000160973.8	ENSMUSG00000021990.17	Spata13	chr14	protein_coding	spermatogenesis associated 13
chr14	60944498	60946874	+	60944528	60946874	A5SS	0.33	50	50	ENSMUST00000160973.8	ENSMUSG00000021990.17	Spata13	chr14	protein_coding	spermatogenesis associated 13
chr14	60970655	60983094	+	60947018	60983094	A5SS	0.5	50	50	ENSMUST00000160973.8	ENSMUSG00000021990.17	Spata13	chr14	protein_coding	spermatogenesis associated 13
chr14	60872313;60874095	60873817;60928303	+	60872313	60928303	cassetteExon	0.5	100	100	ENSMUST00000022566.14	ENSMUSG00000021990.17	Spata13	chr14	protein_coding	spermatogenesis associated 13
chr14	60929997;60944498	60944163;60946874	+	60929997	60946874	cassetteExon	0.5	100	100	ENSMUST00000160095.3	ENSMUSG00000021990.17	Spata13	chr14	protein_coding	spermatogenesis associated 13
chr14	60997106	60998325	+	60997107	60998325	A5SS	0.5	50	50	ENSMUST00000162939.2	ENSMUSG00000021990.17	Spata13	chr14	protein_coding	spermatogenesis associated 13
chr14	61033684	61035679	+	61033684	61039570	A3SS	0.5	50	50	ENSMUST00000063562.9	ENSMUSG00000021993.11	Mipep	chr14	protein_coding	mitochondrial intermediate peptidase
chr14	61083952	61101259	+	61083952	61109467	A3SS	0.5	50	50	ENSMUST00000063562.9	ENSMUSG00000021993.11	Mipep	chr14	protein_coding	mitochondrial intermediate peptidase
chr14	61071543	61080657	+	61071543	61140817	A3SS	0.5	50	50	ENSMUST00000225506.2	ENSMUSG00000021993.11	Mipep	chr14	protein_coding	mitochondrial intermediate peptidase
chr14	61112756	61140817	+	61071543	61140817	A5SS	0.5	50	50	ENSMUST00000225506.2	ENSMUSG00000021993.11	Mipep	chr14	protein_coding	mitochondrial intermediate peptidase
chr14	61262285	61283564	-	61262285	61275299	5pMXE	0.5	50	50	ENSMUST00000111236.4	ENSMUSG00000060548.14	Tnfrsf19	chr14	protein_coding	tumor necrosis factor receptor superfamily, member 19
chr14	61212203	61213160	-	61212203	61234054	A5SS	0.5	50	50	ENSMUST00000111236.4	ENSMUSG00000060548.14	Tnfrsf19	chr14	protein_coding	tumor necrosis factor receptor superfamily, member 19
chr14	61301093	61311088	+	61275992	61311088	A5SS	0.5	50	50	ENSMUST00000227051.2	ENSMUSG00000115627.2	Gm41168	chr14	lncRNA	predicted gene, 41168
chr14	61418479	61427051	+	61418479;61421512	61421401;61427051	ES	0.5	50	50	ENSMUST00000089394.10	ENSMUSG00000048279.20	Sacs	chr14	protein_coding	sacsin
chr14	61430928	61436052	+	61430928	61477766	A3SS	0.33	50	50	ENSMUST00000089394.10	ENSMUSG00000048279.20	Sacs	chr14	protein_coding	sacsin
chr14	61430928	61440147	+	61430928	61477766	A3SS	0.33	50	50	ENSMUST00000089394.10	ENSMUSG00000048279.20	Sacs	chr14	protein_coding	sacsin
chr14	61410664	61410747	+	61385520	61410747	A5SS	0.5	50	50	ENSMUST00000089394.10	ENSMUSG00000048279.20	Sacs	chr14	protein_coding	sacsin
chr14	61430928	61440147	+	61430928	61436052	3pMXE	0.33	50	50	ENSMUST00000227570.2	ENSMUSG00000048279.20	Sacs	chr14	protein_coding	sacsin
chr14	61430928;61436078	61436052;61440147	+	61430928	61440147	cassetteExon	0.5	100	100	ENSMUST00000119943.8	ENSMUSG00000048279.20	Sacs	chr14	protein_coding	sacsin
chr14	61483402;61495429	61495252;61495792	-	61483402	61495792	cassetteExon	0.5	100	100	ENSMUST00000077954.13	ENSMUSG00000035296.15	Sgcg	chr14	protein_coding	sarcoglycan, gamma (dystrophin-associated glycoprotein)
chr14	61460393	61462644	-	61459225	61462644	A3SS	0.5	50	50	ENSMUST00000077954.13	ENSMUSG00000035296.15	Sgcg	chr14	protein_coding	sarcoglycan, gamma (dystrophin-associated glycoprotein)
chr14	61532481	61555205	-	61532481	61542590	5pMXE	0.5	50	50	ENSMUST00000190737.2	ENSMUSG00000101505.2	1700109G14Rik	chr14	lncRNA	RIKEN cDNA 1700109G14 gene
chr14	61579675	61597669	-	61579675;61584890	61584821;61597669	ES	0.5	50	50	ENSMUST00000022494.10	ENSMUSG00000021928.10	Ebpl	chr14	protein_coding	emopamil binding protein-like
chr14	61579675	61597669	-	61584890	61597669	3pMXE	0.5	50	50	ENSMUST00000225112.2	ENSMUSG00000021928.10	Ebpl	chr14	protein_coding	emopamil binding protein-like
chr14	61772690	61783131	-	61772690;61777688	61777586;61783131	ES	0.5	50	50	ENSMUST00000022497.15	ENSMUSG00000021930.15	Spryd7	chr14	protein_coding	SPRY domain containing 7
chr14	61837019	61837243	+	61835795	61837243	A5SS	0.5	50	50	ENSMUST00000165015.9	ENSMUSG00000035235.14	Trim13	chr14	protein_coding	tripartite motif-containing 13
chr14	61841255	61872974	-	61841255;61869932	61869886;61872974	ES	0.5	50	50	ENSMUST00000182768.8	ENSMUSG00000097589.10	Dleu2	chr14	lncRNA	deleted in lymphocytic leukemia, 2
chr14	61841255;61861931	61861882;61869886	-	61841255	61869886	cassetteExon	0.5	100	100	ENSMUST00000182768.8	ENSMUSG00000097589.10	Dleu2	chr14	lncRNA	deleted in lymphocytic leukemia, 2
chr14	61880904;61881508	61881413;61919559	-	61880904	61919559	cassetteExon	0.5	100	100	ENSMUST00000182768.8	ENSMUSG00000097589.10	Dleu2	chr14	lncRNA	deleted in lymphocytic leukemia, 2
chr14	61862811	61869886	-	61841255	61869886	A3SS	0.25	50	50	ENSMUST00000182768.8	ENSMUSG00000097589.10	Dleu2	chr14	lncRNA	deleted in lymphocytic leukemia, 2
chr14	61866265	61869886	-	61841255	61869886	A3SS	0.25	50	50	ENSMUST00000182768.8	ENSMUSG00000097589.10	Dleu2	chr14	lncRNA	deleted in lymphocytic leukemia, 2
chr14	61841255	61851615	-	61841255	61869886	A5SS	0.25	50	50	ENSMUST00000182768.8	ENSMUSG00000097589.10	Dleu2	chr14	lncRNA	deleted in lymphocytic leukemia, 2
chr14	61880904	61885931	-	61880904	61919559	A5SS	0.25	50	50	ENSMUST00000182768.8	ENSMUSG00000097589.10	Dleu2	chr14	lncRNA	deleted in lymphocytic leukemia, 2
chr14	61880904	61886067	-	61880904	61919559	A5SS	0.25	50	50	ENSMUST00000182768.8	ENSMUSG00000097589.10	Dleu2	chr14	lncRNA	deleted in lymphocytic leukemia, 2
chr14	61841255;61861931	61861882;61862669	-	61841255;61851720	61851615;61862669	MXE	0.5	100	100	ENSMUST00000182259.8	ENSMUSG00000097589.10	Dleu2	chr14	lncRNA	deleted in lymphocytic leukemia, 2
chr14	61841255;61861931	61861882;61869886	-	61841255;61862811	61851615;61869886	MXE	0.5	100	100	ENSMUST00000182259.8	ENSMUSG00000097589.10	Dleu2	chr14	lncRNA	deleted in lymphocytic leukemia, 2
chr14	61866265	61869886	-	61862811	61869886	A3SS	0.25	50	50	ENSMUST00000182259.8	ENSMUSG00000097589.10	Dleu2	chr14	lncRNA	deleted in lymphocytic leukemia, 2
chr14	61861931;61862811	61862669;61869886	-	61861931	61869886	cassetteExon	0.5	100	100	ENSMUST00000183066.8	ENSMUSG00000097589.10	Dleu2	chr14	lncRNA	deleted in lymphocytic leukemia, 2
chr14	61857467	61861882	-	61841255	61861882	A3SS	0.5	50	50	ENSMUST00000183066.8	ENSMUSG00000097589.10	Dleu2	chr14	lncRNA	deleted in lymphocytic leukemia, 2
chr14	61866265	61869886	-	61861931	61869886	A3SS	0.25	50	50	ENSMUST00000183066.8	ENSMUSG00000097589.10	Dleu2	chr14	lncRNA	deleted in lymphocytic leukemia, 2
chr14	61841255	61851615	-	61841255	61861882	A5SS	0.25	50	50	ENSMUST00000183066.8	ENSMUSG00000097589.10	Dleu2	chr14	lncRNA	deleted in lymphocytic leukemia, 2
chr14	61841255	61851615	-	61841255	61872974	A5SS	0.25	50	50	ENSMUST00000183054.8	ENSMUSG00000097589.10	Dleu2	chr14	lncRNA	deleted in lymphocytic leukemia, 2
chr14	61841255	61861882	-	61841255	61872974	A5SS	0.25	50	50	ENSMUST00000183054.8	ENSMUSG00000097589.10	Dleu2	chr14	lncRNA	deleted in lymphocytic leukemia, 2
chr14	61880904	61881413	-	61880904	61885931	A5SS	0.25	50	50	ENSMUST00000183054.8	ENSMUSG00000097589.10	Dleu2	chr14	lncRNA	deleted in lymphocytic leukemia, 2
chr14	61880904	61886067	-	61880904	61885931	A5SS	0.25	50	50	ENSMUST00000183054.8	ENSMUSG00000097589.10	Dleu2	chr14	lncRNA	deleted in lymphocytic leukemia, 2
chr14	61880904	61881413	-	61880904	61886067	A5SS	0.25	50	50	ENSMUST00000182325.8	ENSMUSG00000097589.10	Dleu2	chr14	lncRNA	deleted in lymphocytic leukemia, 2
chr14	61861931	61869886	-	61862811	61869886	3pMXE	0.25	50	50	ENSMUST00000183079.8	ENSMUSG00000097589.10	Dleu2	chr14	lncRNA	deleted in lymphocytic leukemia, 2
chr14	61845521	61849101	+	61845555	61849101	A5SS	0.5	50	50	ENSMUST00000225582.2	ENSMUSG00000046168.10	Kcnrg	chr14	protein_coding	potassium channel regulator
chr14	62514557;62523464	62523327;62529977	-	62514557	62529977	cassetteExon	0.5	100	100	ENSMUST00000063169.10	ENSMUSG00000048281.10	Dleu7	chr14	protein_coding	deleted in lymphocytic leukemia, 7
chr14	62584091	62586011	+	62584091	62585970	A3SS	0.5	50	50	ENSMUST00000166879.8	ENSMUSG00000021932.14	Rnaseh2b	chr14	protein_coding	ribonuclease H2, subunit B
chr14	62569625	62584017	+	62530103	62584017	A5SS	0.5	50	50	ENSMUST00000166879.8	ENSMUSG00000021932.14	Rnaseh2b	chr14	protein_coding	ribonuclease H2, subunit B
chr14	62654760	62656528	-	62654760	62656483	A5SS	0.5	50	50	ENSMUST00000022501.10	ENSMUSG00000021933.12	Gucy1b2	chr14	protein_coding	guanylate cyclase 1, soluble, beta 2
chr14	62690902	62692209	-	62690902	62693525	A5SS	0.5	50	50	ENSMUST00000022501.10	ENSMUSG00000021933.12	Gucy1b2	chr14	protein_coding	guanylate cyclase 1, soluble, beta 2
chr14	62702419	62704173	-	62702419	62801923	A5SS	0.5	50	50	ENSMUST00000209021.2	ENSMUSG00000100486.8	Gm4131	chr14	protein_coding	predicted gene 4131
chr14	62793363	62801937	+	62793363;62798989	62798900;62801937	ES	0.5	50	50	ENSMUST00000162987.8	ENSMUSG00000035184.16	Fam124a	chr14	protein_coding	family with sequence similarity 124, member A
chr14	62801968	62843322	+	62801968	62824602	3pMXE	0.33	50	50	ENSMUST00000162987.8	ENSMUSG00000035184.16	Fam124a	chr14	protein_coding	family with sequence similarity 124, member A
chr14	62801968	62802495	+	62801968	62824602	A3SS	0.33	50	50	ENSMUST00000162987.8	ENSMUSG00000035184.16	Fam124a	chr14	protein_coding	family with sequence similarity 124, member A
chr14	62801968	62802495	+	62801968	62843322	A3SS	0.33	50	50	ENSMUST00000161899.8	ENSMUSG00000035184.16	Fam124a	chr14	protein_coding	family with sequence similarity 124, member A
chr14	62825335	62843322	+	62801968	62843322	A5SS	0.5	50	50	ENSMUST00000161899.8	ENSMUSG00000035184.16	Fam124a	chr14	protein_coding	family with sequence similarity 124, member A
chr14	62801968	62843322	+	62801968;62825335	62824602;62843322	ES	0.5	50	50	ENSMUST00000039064.8	ENSMUSG00000035184.16	Fam124a	chr14	protein_coding	family with sequence similarity 124, member A
chr14	62971299	62981358	-	62953931	62981358	A3SS	0.5	50	50	ENSMUST00000053959.7	ENSMUSG00000035161.8	Ints6	chr14	protein_coding	integrator complex subunit 6
chr14	63273550	63287211	-	63273550	63275207	5pMXE	0.5	50	50	ENSMUST00000111207.8	ENSMUSG00000075571.9	Defb30	chr14	protein_coding	defensin beta 30
chr14	63285067	63293216	+	63285067	63285677	3pMXE	0.5	50	50	ENSMUST00000067990.8	ENSMUSG00000054763.10	Defb42	chr14	protein_coding	defensin beta 42
chr14	63284603	63284893	+	63284499	63284893	A5SS	0.5	50	50	ENSMUST00000067990.8	ENSMUSG00000054763.10	Defb42	chr14	protein_coding	defensin beta 42
chr14	63292555	63293216	+	63285067	63293216	A5SS	0.5	50	50	ENSMUST00000142140.8	ENSMUSG00000054763.10	Defb42	chr14	protein_coding	defensin beta 42
chr14	63396595;63396808	63396687;63400751	-	63396595	63400751	cassetteExon	0.5	100	100	ENSMUST00000238526.2	ENSMUSG00000021273.12	Fdft1	chr14	protein_coding	farnesyl diphosphate farnesyl transferase 1
chr14	63396595	63400751	-	63396808	63400751	3pMXE	0.5	50	50	ENSMUST00000224267.3	ENSMUSG00000021273.12	Fdft1	chr14	protein_coding	farnesyl diphosphate farnesyl transferase 1
chr14	63429307	63431056	-	63429307	63430873	5pMXE	0.5	50	50	ENSMUST00000038229.5	ENSMUSG00000035121.7	Neil2	chr14	protein_coding	nei like 2 (E. coli)
chr14	63426230	63426557	-	63426230	63429154	A5SS	0.5	50	50	ENSMUST00000038229.5	ENSMUSG00000035121.7	Neil2	chr14	protein_coding	nei like 2 (E. coli)
chr14	63420183;63420502	63420431;63420870	-	63420183	63420870	cassetteExon	0.5	100	100	ENSMUST00000225157.2	ENSMUSG00000035121.7	Neil2	chr14	protein_coding	nei like 2 (E. coli)
chr14	63429307	63430873	-	63423683	63430873	A3SS	0.5	50	50	ENSMUST00000225157.2	ENSMUSG00000035121.7	Neil2	chr14	protein_coding	nei like 2 (E. coli)
chr14	63423683	63425890	-	63423683	63430873	A5SS	0.5	50	50	ENSMUST00000225157.2	ENSMUSG00000035121.7	Neil2	chr14	protein_coding	nei like 2 (E. coli)
chr14	63479094	63508422	-	63479094	63482600	5pMXE	0.25	50	50	ENSMUST00000118022.8	ENSMUSG00000021944.16	Gata4	chr14	protein_coding	GATA binding protein 4
chr14	63479094	63508506	-	63479094	63482600	5pMXE	0.25	50	50	ENSMUST00000118022.8	ENSMUSG00000021944.16	Gata4	chr14	protein_coding	GATA binding protein 4
chr14	63479094	63509033	-	63479094	63482600	5pMXE	0.25	50	50	ENSMUST00000118022.8	ENSMUSG00000021944.16	Gata4	chr14	protein_coding	GATA binding protein 4
chr14	63442207	63477985	-	63442204	63477985	A3SS	0.5	50	50	ENSMUST00000118022.8	ENSMUSG00000021944.16	Gata4	chr14	protein_coding	GATA binding protein 4
chr14	63442204	63450814	-	63442204	63477985	A5SS	0.5	50	50	ENSMUST00000118022.8	ENSMUSG00000021944.16	Gata4	chr14	protein_coding	GATA binding protein 4
chr14	63479094	63508422	-	63479094	63509033	A5SS	0.25	50	50	ENSMUST00000132122.2	ENSMUSG00000021944.16	Gata4	chr14	protein_coding	GATA binding protein 4
chr14	63479094	63508506	-	63479094	63509033	A5SS	0.25	50	50	ENSMUST00000132122.2	ENSMUSG00000021944.16	Gata4	chr14	protein_coding	GATA binding protein 4
chr14	63479094	63508506	-	63479094	63508422	A5SS	0.25	50	50	ENSMUST00000137244.8	ENSMUSG00000021944.16	Gata4	chr14	protein_coding	GATA binding protein 4
chr14	63731460	63733169	-	63731460;63731896	63731806;63733169	ES	0.33	50	50	ENSMUST00000022522.15	ENSMUSG00000021953.15	Tdh	chr14	protein_coding	L-threonine dehydrogenase
chr14	63733341	63734394	-	63733341;63733588	63733439;63734394	ES	0.5	50	50	ENSMUST00000022522.15	ENSMUSG00000021953.15	Tdh	chr14	protein_coding	L-threonine dehydrogenase
chr14	63731871	63733169	-	63731896	63733169	A3SS	0.33	50	50	ENSMUST00000022522.15	ENSMUSG00000021953.15	Tdh	chr14	protein_coding	L-threonine dehydrogenase
chr14	63741813	63746159	-	63737769	63746159	A3SS	0.5	50	50	ENSMUST00000022522.15	ENSMUSG00000021953.15	Tdh	chr14	protein_coding	L-threonine dehydrogenase
chr14	63731460;63731871	63731806;63733169	-	63731460	63733169	cassetteExon	0.5	100	100	ENSMUST00000168669.8	ENSMUSG00000021953.15	Tdh	chr14	protein_coding	L-threonine dehydrogenase
chr14	63844733	63898269	+	63844733	64035656	A3SS	0.5	50	50	ENSMUST00000119973.3	ENSMUSG00000035067.10	Xkr6	chr14	protein_coding	X-linked Kx blood group related 6
chr14	64032778	64035656	+	63844733	64035656	A5SS	0.5	50	50	ENSMUST00000119973.3	ENSMUSG00000035067.10	Xkr6	chr14	protein_coding	X-linked Kx blood group related 6
chr14	63896914	63898269	+	63844733	63898269	A5SS	0.5	50	50	ENSMUST00000176510.2	ENSMUSG00000035067.10	Xkr6	chr14	protein_coding	X-linked Kx blood group related 6
chr14	63898478	63900034	+	63898375	63900034	A5SS	0.5	50	50	ENSMUST00000176510.2	ENSMUSG00000035067.10	Xkr6	chr14	protein_coding	X-linked Kx blood group related 6
chr14	64137417	64156546	+	64115637	64156546	A5SS	0.5	50	50	ENSMUST00000022528.6	ENSMUSG00000021958.6	Pinx1	chr14	protein_coding	PIN2/TERF1 interacting, telomerase inhibitor 1
chr14	64223726	64224807	-	64223726	64225149	A5SS	0.5	50	50	ENSMUST00000224600.2	ENSMUSG00000021961.7	4930578I06Rik	chr14	protein_coding	RIKEN cDNA 4930578I06 gene
chr14	64319300	64325384	-	64319300	64322760	5pMXE	0.5	50	50	ENSMUST00000171503.8	ENSMUSG00000034623.15	Prss55	chr14	protein_coding	protease, serine 55
chr14	64313243	64314530	-	64313235	64314530	A3SS	0.5	50	50	ENSMUST00000171503.8	ENSMUSG00000034623.15	Prss55	chr14	protein_coding	protease, serine 55
chr14	64331267	64332379	+	64323855	64332379	A5SS	0.33	50	50	ENSMUST00000063785.12	ENSMUSG00000052099.15	Prss51	chr14	protein_coding	protease, serine 51
chr14	64331296	64332379	+	64323855	64332379	A5SS	0.33	50	50	ENSMUST00000063785.12	ENSMUSG00000052099.15	Prss51	chr14	protein_coding	protease, serine 51
chr14	64332476	64333359	+	64332459	64333359	A5SS	0.33	50	50	ENSMUST00000063785.12	ENSMUSG00000052099.15	Prss51	chr14	protein_coding	protease, serine 51
chr14	64332571	64333359	+	64332459	64333359	A5SS	0.33	50	50	ENSMUST00000063785.12	ENSMUSG00000052099.15	Prss51	chr14	protein_coding	protease, serine 51
chr14	64331296	64332379	+	64331267	64332379	A5SS	0.33	50	50	ENSMUST00000224112.2	ENSMUSG00000052099.15	Prss51	chr14	protein_coding	protease, serine 51
chr14	64332476	64333359	+	64332571	64333359	A5SS	0.33	50	50	ENSMUST00000224112.2	ENSMUSG00000052099.15	Prss51	chr14	protein_coding	protease, serine 51
chr14	64688599	64689846	-	64688487	64689846	A3SS	0.5	50	50	ENSMUST00000067927.9	ENSMUSG00000054733.10	Msra	chr14	protein_coding	methionine sulfoxide reductase A
chr14	64551204	64654347	-	64551204	64678159	A5SS	0.33	50	50	ENSMUST00000067927.9	ENSMUSG00000054733.10	Msra	chr14	protein_coding	methionine sulfoxide reductase A
chr14	64551204	64654531	-	64551204	64678159	A5SS	0.33	50	50	ENSMUST00000067927.9	ENSMUSG00000054733.10	Msra	chr14	protein_coding	methionine sulfoxide reductase A
chr14	64551204	64654531	-	64551204	64654347	5pMXE	0.33	50	50	ENSMUST00000210428.2	ENSMUSG00000054733.10	Msra	chr14	protein_coding	methionine sulfoxide reductase A
chr14	64890105	64907073	+	64884757	64907073	A5SS	0.5	50	50	ENSMUST00000224126.2	ENSMUSG00000060012.10	Kif13b	chr14	protein_coding	kinesin family member 13B
chr14	65027147	65040423	+	65027147	65037794	A3SS&ES	0.5	50	50	ENSMUST00000100473.5	ENSMUSG00000060012.10	Kif13b	chr14	protein_coding	kinesin family member 13B
chr14	65027147	65040423	+	65027147;65037856	65037794;65040423	ES	0.5	50	50	ENSMUST00000224503.2	ENSMUSG00000060012.10	Kif13b	chr14	protein_coding	kinesin family member 13B
chr14	65063144	65066035	-	65063144;65064316	65064221;65066035	ES	0.5	50	50	ENSMUST00000022544.14	ENSMUSG00000021972.15	Hmbox1	chr14	protein_coding	homeobox containing 1
chr14	65060613	65063050	-	65054585	65063050	A3SS	0.25	50	50	ENSMUST00000022544.14	ENSMUSG00000021972.15	Hmbox1	chr14	protein_coding	homeobox containing 1
chr14	65061147	65063050	-	65054585	65063050	A3SS	0.25	50	50	ENSMUST00000022544.14	ENSMUSG00000021972.15	Hmbox1	chr14	protein_coding	homeobox containing 1
chr14	65062819	65063050	-	65054585	65063050	A3SS	0.25	50	50	ENSMUST00000022544.14	ENSMUSG00000021972.15	Hmbox1	chr14	protein_coding	homeobox containing 1
chr14	65063141	65064221	-	65063144	65064221	A3SS	0.5	50	50	ENSMUST00000022544.14	ENSMUSG00000021972.15	Hmbox1	chr14	protein_coding	homeobox containing 1
chr14	65054585	65059503	-	65054585	65063050	A5SS	0.5	50	50	ENSMUST00000022544.14	ENSMUSG00000021972.15	Hmbox1	chr14	protein_coding	homeobox containing 1
chr14	65061147;65062819	65062748;65063050	-	65061147	65063050	cassetteExon	0.5	100	100	ENSMUST00000067843.10	ENSMUSG00000021972.15	Hmbox1	chr14	protein_coding	homeobox containing 1
chr14	65060613	65063050	-	65061147	65063050	A3SS	0.25	50	50	ENSMUST00000067843.10	ENSMUSG00000021972.15	Hmbox1	chr14	protein_coding	homeobox containing 1
chr14	65063144	65066035	-	65064316	65066035	A3SS&ES	0.5	50	50	ENSMUST00000067843.10	ENSMUSG00000021972.15	Hmbox1	chr14	protein_coding	homeobox containing 1
chr14	65062819	65063050	-	65060613	65063050	A3SS	0.25	50	50	ENSMUST00000176832.8	ENSMUSG00000021972.15	Hmbox1	chr14	protein_coding	homeobox containing 1
chr14	65061147	65063050	-	65062819	65063050	3pMXE	0.25	50	50	ENSMUST00000175744.8	ENSMUSG00000021972.15	Hmbox1	chr14	protein_coding	homeobox containing 1
chr14	65317924	65387259	-	65317924	65335446	5pMXE	0.5	50	50	ENSMUST00000022550.8	ENSMUSG00000021978.10	Extl3	chr14	protein_coding	exostosin-like glycosyltransferase 3
chr14	65317964	65335446	-	65317924	65335446	A3SS	0.5	50	50	ENSMUST00000022550.8	ENSMUSG00000021978.10	Extl3	chr14	protein_coding	exostosin-like glycosyltransferase 3
chr14	65411624	65413952	+	65409883	65413952	A5SS	0.5	50	50	ENSMUST00000223930.2	ENSMUSG00000114693.2	Gm41177	chr14	lncRNA	predicted gene, 41177
chr14	65449672	65465476	-	65449672	65472363	A5SS	0.5	50	50	ENSMUST00000131309.3	ENSMUSG00000007989.8	Fzd3	chr14	protein_coding	frizzled class receptor 3
chr14	65540651;65557589	65557554;65558683	+	65540651	65558683	cassetteExon	0.5	100	100	ENSMUST00000224629.2	ENSMUSG00000034532.10	Fbxo16	chr14	protein_coding	F-box protein 16
chr14	65533067	65536635	+	65533006	65536635	A5SS	0.5	50	50	ENSMUST00000224629.2	ENSMUSG00000034532.10	Fbxo16	chr14	protein_coding	F-box protein 16
chr14	65612998	65622848	+	65595867	65622848	A5SS	0.5	50	50	ENSMUST00000224623.2	ENSMUSG00000034522.11	Zfp395	chr14	protein_coding	zinc finger protein 395
chr14	65622885	65623776	+	65623109	65623776	A5SS	0.5	50	50	ENSMUST00000224623.2	ENSMUSG00000034522.11	Zfp395	chr14	protein_coding	zinc finger protein 395
chr14	65639310	65642209	-	65639310	65642153	A5SS	0.5	50	50	ENSMUST00000059339.6	ENSMUSG00000045731.7	Pnoc	chr14	protein_coding	prepronociceptin
chr14	65769049	65784432	-	65769049	65784583	A5SS	0.5	50	50	ENSMUST00000225355.2	ENSMUSG00000022031.7	Elp3	chr14	protein_coding	elongator acetyltransferase complex subunit 3
chr14	65828054	65830374	-	65828054	65830431	A5SS	0.5	50	50	ENSMUST00000225355.2	ENSMUSG00000022031.7	Elp3	chr14	protein_coding	elongator acetyltransferase complex subunit 3
chr14	65844212	65845588	+	65842476	65845588	A5SS	0.5	50	50	ENSMUST00000150897.8	ENSMUSG00000061356.14	Nuggc	chr14	protein_coding	nuclear GTPase, germinal center associated
chr14	65979628	65980591	+	65979628	65997034	A3SS	0.5	50	50	ENSMUST00000022610.15	ENSMUSG00000022032.15	Scara5	chr14	protein_coding	scavenger receptor class A, member 5
chr14	65916899	65927217	+	65908123	65927217	A5SS	0.5	50	50	ENSMUST00000022610.15	ENSMUSG00000022032.15	Scara5	chr14	protein_coding	scavenger receptor class A, member 5
chr14	66046738	66050415	+	66046738;66049473	66049380;66050415	ES	0.5	50	50	ENSMUST00000022612.10	ENSMUSG00000022033.10	Pbk	chr14	protein_coding	PDZ binding kinase
chr14	66043751	66046664	+	66043583	66046664	A5SS	0.5	50	50	ENSMUST00000022612.10	ENSMUSG00000022033.10	Pbk	chr14	protein_coding	PDZ binding kinase
chr14	66069015	66070113	-	66069243	66070113	A3SS	0.5	50	50	ENSMUST00000022613.10	ENSMUSG00000022034.11	Esco2	chr14	protein_coding	establishment of sister chromatid cohesion N-acetyltransferase 2
chr14	66207348	66209181	+	66206137	66209181	A5SS	0.16	50	50	ENSMUST00000022616.14	ENSMUSG00000022037.16	Clu	chr14	protein_coding	clusterin
chr14	66208153	66209181	+	66206137	66209181	A5SS	0.16	50	50	ENSMUST00000022616.14	ENSMUSG00000022037.16	Clu	chr14	protein_coding	clusterin
chr14	66208393	66209181	+	66206137	66209181	A5SS	0.16	50	50	ENSMUST00000022616.14	ENSMUSG00000022037.16	Clu	chr14	protein_coding	clusterin
chr14	66208624	66209181	+	66206137	66209181	A5SS	0.16	50	50	ENSMUST00000022616.14	ENSMUSG00000022037.16	Clu	chr14	protein_coding	clusterin
chr14	66208993	66209181	+	66206137	66209181	A5SS	0.16	50	50	ENSMUST00000022616.14	ENSMUSG00000022037.16	Clu	chr14	protein_coding	clusterin
chr14	66209305	66210774	+	66209301	66210774	A5SS	0.5	50	50	ENSMUST00000022616.14	ENSMUSG00000022037.16	Clu	chr14	protein_coding	clusterin
chr14	66208153	66209181	+	66207348	66209181	A5SS	0.16	50	50	ENSMUST00000153460.8	ENSMUSG00000022037.16	Clu	chr14	protein_coding	clusterin
chr14	66208393	66209181	+	66207348	66209181	A5SS	0.16	50	50	ENSMUST00000153460.8	ENSMUSG00000022037.16	Clu	chr14	protein_coding	clusterin
chr14	66208624	66209181	+	66207348	66209181	A5SS	0.16	50	50	ENSMUST00000153460.8	ENSMUSG00000022037.16	Clu	chr14	protein_coding	clusterin
chr14	66208993	66209181	+	66207348	66209181	A5SS	0.16	50	50	ENSMUST00000153460.8	ENSMUSG00000022037.16	Clu	chr14	protein_coding	clusterin
chr14	66208393	66209181	+	66208153	66209181	A5SS	0.16	50	50	ENSMUST00000127387.8	ENSMUSG00000022037.16	Clu	chr14	protein_coding	clusterin
chr14	66208624	66209181	+	66208153	66209181	A5SS	0.16	50	50	ENSMUST00000127387.8	ENSMUSG00000022037.16	Clu	chr14	protein_coding	clusterin
chr14	66208993	66209181	+	66208153	66209181	A5SS	0.16	50	50	ENSMUST00000127387.8	ENSMUSG00000022037.16	Clu	chr14	protein_coding	clusterin
chr14	66208624	66209181	+	66208393	66209181	A5SS	0.16	50	50	ENSMUST00000138191.8	ENSMUSG00000022037.16	Clu	chr14	protein_coding	clusterin
chr14	66208993	66209181	+	66208393	66209181	A5SS	0.16	50	50	ENSMUST00000138191.8	ENSMUSG00000022037.16	Clu	chr14	protein_coding	clusterin
chr14	66208993	66209181	+	66208624	66209181	A5SS	0.16	50	50	ENSMUST00000128539.8	ENSMUSG00000022037.16	Clu	chr14	protein_coding	clusterin
chr14	66347724	66354160	-	66347724	66349638	5pMXE	0.33	50	50	ENSMUST00000224698.2	ENSMUSG00000022040.9	Ephx2	chr14	protein_coding	epoxide hydrolase 2, cytoplasmic
chr14	66347724	66347862	-	66347724	66349638	A5SS	0.33	50	50	ENSMUST00000224698.2	ENSMUSG00000022040.9	Ephx2	chr14	protein_coding	epoxide hydrolase 2, cytoplasmic
chr14	66347724	66354160	-	66347724	66347862	5pMXE	0.33	50	50	ENSMUST00000225309.2	ENSMUSG00000022040.9	Ephx2	chr14	protein_coding	epoxide hydrolase 2, cytoplasmic
chr14	66378454	66379593	+	66372720	66379593	A5SS	0.5	50	50	ENSMUST00000206455.2	ENSMUSG00000022041.11	Chrna2	chr14	protein_coding	cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal)
chr14	66396126	66402713	-	66396126;66400599	66400474;66402713	ES	0.5	50	50	ENSMUST00000022622.14	ENSMUSG00000059456.14	Ptk2b	chr14	protein_coding	PTK2 protein tyrosine kinase 2 beta
chr14	66394544	66395497	-	66394556	66395497	A3SS	0.5	50	50	ENSMUST00000022622.14	ENSMUSG00000059456.14	Ptk2b	chr14	protein_coding	PTK2 protein tyrosine kinase 2 beta
chr14	66394556	66395464	-	66394556	66395497	A5SS	0.5	50	50	ENSMUST00000022622.14	ENSMUSG00000059456.14	Ptk2b	chr14	protein_coding	PTK2 protein tyrosine kinase 2 beta
chr14	66396126	66402713	-	66396126	66400474	5pMXE	0.5	50	50	ENSMUST00000148104.2	ENSMUSG00000059456.14	Ptk2b	chr14	protein_coding	PTK2 protein tyrosine kinase 2 beta
chr14	66533593;66534126	66533942;66534258	-	66533593	66534258	cassetteExon	0.5	100	100	ENSMUST00000153646.8	ENSMUSG00000085984.8	1700001G11Rik	chr14	lncRNA	RIKEN cDNA 1700001G11 gene
chr14	66533593	66534258	-	66533593	66533942	A5SS	0.5	50	50	ENSMUST00000143392.2	ENSMUSG00000085984.8	1700001G11Rik	chr14	lncRNA	RIKEN cDNA 1700001G11 gene
chr14	66581860	66591803	+	66581860;66590663	66590598;66591803	ES	0.5	50	50	ENSMUST00000152093.8	ENSMUSG00000022044.15	Stmn4	chr14	protein_coding	stathmin-like 4
chr14	66591894;66592264	66592097;66593035	+	66591894	66593035	cassetteExon	0.5	100	100	ENSMUST00000152093.8	ENSMUSG00000022044.15	Stmn4	chr14	protein_coding	stathmin-like 4
chr14	66593130;66593798	66593718;66594158	+	66593130	66594158	cassetteExon	0.5	100	100	ENSMUST00000152093.8	ENSMUSG00000022044.15	Stmn4	chr14	protein_coding	stathmin-like 4
chr14	66595486;66596180	66596128;66598524	+	66595486	66598524	cassetteExon	0.5	100	100	ENSMUST00000074523.13	ENSMUSG00000022044.15	Stmn4	chr14	protein_coding	stathmin-like 4
chr14	66873052	66874440	+	66873052	66874430	A3SS	0.33	50	50	ENSMUST00000159365.8	ENSMUSG00000045875.14	Adra1a	chr14	protein_coding	adrenergic receptor, alpha 1a
chr14	66873052	66874903	+	66873052	66874430	A3SS	0.33	50	50	ENSMUST00000159365.8	ENSMUSG00000045875.14	Adra1a	chr14	protein_coding	adrenergic receptor, alpha 1a
chr14	66965449	66969013	+	66965280	66969013	A5SS	0.5	50	50	ENSMUST00000159365.8	ENSMUSG00000045875.14	Adra1a	chr14	protein_coding	adrenergic receptor, alpha 1a
chr14	66873052	66874903	+	66873052	66874440	A3SS	0.33	50	50	ENSMUST00000054661.8	ENSMUSG00000045875.14	Adra1a	chr14	protein_coding	adrenergic receptor, alpha 1a
chr14	66875909	66964895	+	66875909	67008034	A3SS	0.5	50	50	ENSMUST00000225182.2	ENSMUSG00000045875.14	Adra1a	chr14	protein_coding	adrenergic receptor, alpha 1a
chr14	67022102	67022898	+	67022102	67029495	A3SS	0.5	50	50	ENSMUST00000071522.4	ENSMUSG00000057913.4	Gm10032	chr14	lncRNA	predicted gene 10032
chr14	67148742	67153208	+	67148742;67152899	67152771;67153208	ES	0.5	50	50	ENSMUST00000089236.11	ENSMUSG00000046204.15	Pnma2	chr14	protein_coding	paraneoplastic antigen MA2
chr14	67148742;67152213	67151756;67152771	+	67148742	67152771	cassetteExon	0.5	100	100	ENSMUST00000089236.11	ENSMUSG00000046204.15	Pnma2	chr14	protein_coding	paraneoplastic antigen MA2
chr14	67148742	67151756	+	67148742	67153208	A3SS	0.33	50	50	ENSMUST00000122431.3	ENSMUSG00000046204.15	Pnma2	chr14	protein_coding	paraneoplastic antigen MA2
chr14	67148742	67152771	+	67148742	67151756	3pMXE	0.33	50	50	ENSMUST00000168010.2	ENSMUSG00000046204.15	Pnma2	chr14	protein_coding	paraneoplastic antigen MA2
chr14	67148742	67152771	+	67152213	67152771	5pMXE	0.5	50	50	ENSMUST00000165831.2	ENSMUSG00000046204.15	Pnma2	chr14	protein_coding	paraneoplastic antigen MA2
chr14	67225224	67226584	-	67225224;67226390	67226349;67226584	ES	0.5	50	50	ENSMUST00000111115.8	ENSMUSG00000022051.16	Bnip3l	chr14	protein_coding	BCL2/adenovirus E1B interacting protein 3-like
chr14	67226958	67227259	-	67226958	67231326	A5SS	0.5	50	50	ENSMUST00000111115.8	ENSMUSG00000022051.16	Bnip3l	chr14	protein_coding	BCL2/adenovirus E1B interacting protein 3-like
chr14	67237153	67237263	-	67237153	67246137	A5SS	0.33	50	50	ENSMUST00000111115.8	ENSMUSG00000022051.16	Bnip3l	chr14	protein_coding	BCL2/adenovirus E1B interacting protein 3-like
chr14	67237153	67237854	-	67237153	67246137	A5SS	0.33	50	50	ENSMUST00000111115.8	ENSMUSG00000022051.16	Bnip3l	chr14	protein_coding	BCL2/adenovirus E1B interacting protein 3-like
chr14	67237153	67237854	-	67237153	67237263	5pMXE	0.33	50	50	ENSMUST00000151059.8	ENSMUSG00000022051.16	Bnip3l	chr14	protein_coding	BCL2/adenovirus E1B interacting protein 3-like
chr14	67266479;67275457	67275387;67276324	-	67266479	67276324	cassetteExon	0.5	100	100	ENSMUST00000089230.7	ENSMUSG00000022052.10	Ppp2r2a	chr14	protein_coding	protein phosphatase 2, regulatory subunit B, alpha
chr14	67276421;67299947	67299886;67307684	-	67276421	67307684	cassetteExon	0.5	100	100	ENSMUST00000089230.7	ENSMUSG00000022052.10	Ppp2r2a	chr14	protein_coding	protein phosphatase 2, regulatory subunit B, alpha
chr14	67252707	67257165	-	67254102	67257165	A3SS	0.5	50	50	ENSMUST00000089230.7	ENSMUSG00000022052.10	Ppp2r2a	chr14	protein_coding	protein phosphatase 2, regulatory subunit B, alpha
chr14	67276421	67280868	-	67276421	67307684	A5SS	0.33	50	50	ENSMUST00000089230.7	ENSMUSG00000022052.10	Ppp2r2a	chr14	protein_coding	protein phosphatase 2, regulatory subunit B, alpha
chr14	67276421	67280868	-	67276421	67299886	A5SS	0.33	50	50	ENSMUST00000225251.2	ENSMUSG00000022052.10	Ppp2r2a	chr14	protein_coding	protein phosphatase 2, regulatory subunit B, alpha
chr14	67471405	67472275	+	67471405	67472280	A3SS	0.5	50	50	ENSMUST00000022637.14	ENSMUSG00000022053.14	Ebf2	chr14	protein_coding	early B cell factor 2
chr14	67931200	67932414	-	67931203	67932414	A3SS	0.5	50	50	ENSMUST00000150006.9	ENSMUSG00000048922.19	Cdca2	chr14	protein_coding	cell division cycle associated 2
chr14	67952454	67952673	-	67952454	67953201	A5SS	0.33	50	50	ENSMUST00000150006.9	ENSMUSG00000048922.19	Cdca2	chr14	protein_coding	cell division cycle associated 2
chr14	67952454	67952938	-	67952454	67953201	A5SS	0.33	50	50	ENSMUST00000150006.9	ENSMUSG00000048922.19	Cdca2	chr14	protein_coding	cell division cycle associated 2
chr14	67952454	67952938	-	67952454	67952673	A5SS	0.33	50	50	ENSMUST00000163100.8	ENSMUSG00000048922.19	Cdca2	chr14	protein_coding	cell division cycle associated 2
chr14	67970891	67975055	+	67970891;67971739	67971590;67975055	ES	0.5	50	50	ENSMUST00000152243.8	ENSMUSG00000034327.18	Kctd9	chr14	protein_coding	potassium channel tetramerisation domain containing 9
chr14	67966195	67966800	+	67966195	67966673	A3SS	0.5	50	50	ENSMUST00000152243.8	ENSMUSG00000034327.18	Kctd9	chr14	protein_coding	potassium channel tetramerisation domain containing 9
chr14	67953833	67962007	+	67953630	67962007	A5SS	0.5	50	50	ENSMUST00000152243.8	ENSMUSG00000034327.18	Kctd9	chr14	protein_coding	potassium channel tetramerisation domain containing 9
chr14	67966195;67966686	67966673;67966800	+	67966195	67966800	cassetteExon	0.5	100	100	ENSMUST00000078053.13	ENSMUSG00000034327.18	Kctd9	chr14	protein_coding	potassium channel tetramerisation domain containing 9
chr14	67982774;67983929	67983788;67985252	+	67982774	67985252	cassetteExon	0.5	100	100	ENSMUST00000223929.2	ENSMUSG00000015812.9	Gnrh1	chr14	protein_coding	gonadotropin releasing hormone 1
chr14	67982774	67985252	+	67983929	67985252	5pMXE	0.5	50	50	ENSMUST00000223951.2	ENSMUSG00000015812.9	Gnrh1	chr14	protein_coding	gonadotropin releasing hormone 1
chr14	68358833	68360270	-	68353465	68360270	A3SS	0.5	50	50	ENSMUST00000111089.8	ENSMUSG00000022054.12	Nefm	chr14	protein_coding	neurofilament, medium polypeptide
chr14	68745383;68746339	68746269;68747119	-	68745383	68747119	cassetteExon	0.5	100	100	ENSMUST00000022640.8	ENSMUSG00000022056.10	Adam7	chr14	protein_coding	a disintegrin and metallopeptidase domain 7
chr14	68848455	68855544	-	68848455;68855219	68855141;68855544	ES	0.5	50	50	ENSMUST00000111072.8	ENSMUSG00000014725.17	Adam28	chr14	protein_coding	a disintegrin and metallopeptidase domain 28
chr14	68844982	68845366	-	68844045	68845366	A3SS	0.5	50	50	ENSMUST00000111072.8	ENSMUSG00000014725.17	Adam28	chr14	protein_coding	a disintegrin and metallopeptidase domain 28
chr14	68891864	68893088	-	68886960	68893088	A3SS	0.5	50	50	ENSMUST00000111072.8	ENSMUSG00000014725.17	Adam28	chr14	protein_coding	a disintegrin and metallopeptidase domain 28
chr14	69509742	69522181	-	69487071	69522181	A3SS	0.5	50	50	ENSMUST00000037064.5	ENSMUSG00000034248.8	Slc25a37	chr14	protein_coding	solute carrier family 25, member 37
chr14	69485086	69486332	-	69485086	69486843	A5SS	0.5	50	50	ENSMUST00000037064.5	ENSMUSG00000034248.8	Slc25a37	chr14	protein_coding	solute carrier family 25, member 37
chr14	69567410;69569756	69569704;69569982	-	69567410	69569982	cassetteExon	0.5	100	100	ENSMUST00000181229.2	ENSMUSG00000097511.3	Gm16677	chr14	lncRNA	predicted gene, 16677
chr14	69571594	69574397	-	69570086	69574397	A3SS	0.5	50	50	ENSMUST00000229870.2	ENSMUSG00000097511.3	Gm16677	chr14	lncRNA	predicted gene, 16677
chr14	69574737	69576179	+	69574737	69584935	A3SS	0.5	50	50	ENSMUST00000184973.8	ENSMUSG00000095463.9	Entpd4	chr14	protein_coding	ectonucleoside triphosphate diphosphohydrolase 4
chr14	69586719	69587192	+	69586719	69588152	A3SS	0.5	50	50	ENSMUST00000184973.8	ENSMUSG00000095463.9	Entpd4	chr14	protein_coding	ectonucleoside triphosphate diphosphohydrolase 4
chr14	69584281	69584935	+	69574737	69584935	A5SS	0.5	50	50	ENSMUST00000184973.8	ENSMUSG00000095463.9	Entpd4	chr14	protein_coding	ectonucleoside triphosphate diphosphohydrolase 4
chr14	69604097;69608633	69608481;69610462	-	69604097	69610462	cassetteExon	0.5	100	100	ENSMUST00000183917.8	ENSMUSG00000093954.9	Gm16867	chr14	protein_coding	predicted gene, 16867
chr14	69610570;69659448	69659347;69740431	-	69610570	69740431	cassetteExon	0.5	100	100	ENSMUST00000183917.8	ENSMUSG00000093954.9	Gm16867	chr14	protein_coding	predicted gene, 16867
chr14	69702460	69740431	-	69610570	69740431	A3SS	0.25	50	50	ENSMUST00000183917.8	ENSMUSG00000093954.9	Gm16867	chr14	protein_coding	predicted gene, 16867
chr14	69727992	69740431	-	69610570	69740431	A3SS	0.25	50	50	ENSMUST00000183917.8	ENSMUSG00000093954.9	Gm16867	chr14	protein_coding	predicted gene, 16867
chr14	69624846	69659347	-	69610570	69659347	A3SS	0.33	50	50	ENSMUST00000184816.8	ENSMUSG00000093954.9	Gm16867	chr14	protein_coding	predicted gene, 16867
chr14	69659145	69659347	-	69610570	69659347	A3SS	0.33	50	50	ENSMUST00000184816.8	ENSMUSG00000093954.9	Gm16867	chr14	protein_coding	predicted gene, 16867
chr14	69702460	69740431	-	69659448	69740431	A3SS	0.25	50	50	ENSMUST00000184816.8	ENSMUSG00000093954.9	Gm16867	chr14	protein_coding	predicted gene, 16867
chr14	69727992	69740431	-	69659448	69740431	A3SS	0.25	50	50	ENSMUST00000184816.8	ENSMUSG00000093954.9	Gm16867	chr14	protein_coding	predicted gene, 16867
chr14	69659448	69663771	-	69659448	69740431	A5SS	0.5	50	50	ENSMUST00000184816.8	ENSMUSG00000093954.9	Gm16867	chr14	protein_coding	predicted gene, 16867
chr14	69659145	69659347	-	69624846	69659347	A3SS	0.5	50	50	ENSMUST00000183840.8	ENSMUSG00000093954.9	Gm16867	chr14	protein_coding	predicted gene, 16867
chr14	69727992	69740431	-	69702460	69740431	A3SS	0.25	50	50	ENSMUST00000179116.3	ENSMUSG00000093954.9	Gm16867	chr14	protein_coding	predicted gene, 16867
chr14	69792987	69794429	+	69792987	69803185	A3SS	0.5	50	50	ENSMUST00000185072.8	ENSMUSG00000022066.17	Entpd4b	chr14	protein_coding	ectonucleoside triphosphate diphosphohydrolase 4B
chr14	69804969	69805442	+	69804969	69806402	A3SS	0.5	50	50	ENSMUST00000185072.8	ENSMUSG00000022066.17	Entpd4b	chr14	protein_coding	ectonucleoside triphosphate diphosphohydrolase 4B
chr14	69802531	69803185	+	69792987	69803185	A5SS	0.5	50	50	ENSMUST00000185072.8	ENSMUSG00000022066.17	Entpd4b	chr14	protein_coding	ectonucleoside triphosphate diphosphohydrolase 4B
chr14	69822347;69826883	69826731;69828712	-	69822347	69828712	cassetteExon	0.5	100	100	ENSMUST00000183339.8	ENSMUSG00000098975.8	Gm27177	chr14	lncRNA	predicted gene 27177
chr14	69843096	69877622	-	69828820	69877622	A3SS	0.33	50	50	ENSMUST00000183339.8	ENSMUSG00000098975.8	Gm27177	chr14	lncRNA	predicted gene 27177
chr14	69877420	69877622	-	69828820	69877622	A3SS	0.33	50	50	ENSMUST00000183339.8	ENSMUSG00000098975.8	Gm27177	chr14	lncRNA	predicted gene 27177
chr14	69877420	69877622	-	69843096	69877622	A3SS	0.5	50	50	ENSMUST00000184792.8	ENSMUSG00000098975.8	Gm27177	chr14	lncRNA	predicted gene 27177
chr14	69847015	69871333	+	69846743	69871333	A5SS	0.5	50	50	ENSMUST00000022660.14	ENSMUSG00000034205.17	Loxl2	chr14	protein_coding	lysyl oxidase-like 2
chr14	69944133	69944955	-	69944133;69944630	69944503;69944955	ES	0.5	50	50	ENSMUST00000118374.8	ENSMUSG00000034194.19	R3hcc1	chr14	protein_coding	R3H domain and coiled-coil containing 1
chr14	69944133	69944955	-	69944133	69944503	5pMXE	0.5	50	50	ENSMUST00000121142.4	ENSMUSG00000034194.19	R3hcc1	chr14	protein_coding	R3H domain and coiled-coil containing 1
chr14	70018022;70019299	70019151;70019681	+	70018022	70019681	cassetteExon	0.5	100	100	ENSMUST00000022663.7	ENSMUSG00000022074.7	Tnfrsf10b	chr14	protein_coding	tumor necrosis factor receptor superfamily, member 10b
chr14	70027342	70031353	-	70026169	70031353	A3SS	0.5	50	50	ENSMUST00000022665.4	ENSMUSG00000022075.8	Rhobtb2	chr14	protein_coding	Rho-related BTB domain containing 2
chr14	70315047	70316345	+	70315047;70315525	70315473;70316345	ES	0.33	50	50	ENSMUST00000035908.3	ENSMUSG00000033730.5	Egr3	chr14	protein_coding	early growth response 3
chr14	70315324	70316345	+	70315525	70316345	A5SS&ES	0.33	50	50	ENSMUST00000035908.3	ENSMUSG00000033730.5	Egr3	chr14	protein_coding	early growth response 3
chr14	70315324	70316345	+	70315047	70316345	A5SS	0.33	50	50	ENSMUST00000225200.2	ENSMUSG00000033730.5	Egr3	chr14	protein_coding	early growth response 3
chr14	70356101	70361632	+	70356101;70361330	70361290;70361632	ES	0.33	50	50	ENSMUST00000022680.9	ENSMUSG00000022089.10	Bin3	chr14	protein_coding	bridging integrator 3
chr14	70337645;70343436	70343268;70356053	+	70337645	70356053	cassetteExon	0.5	100	100	ENSMUST00000022680.9	ENSMUSG00000022089.10	Bin3	chr14	protein_coding	bridging integrator 3
chr14	70356183	70361290	+	70356101	70361290	A5SS	0.5	50	50	ENSMUST00000022680.9	ENSMUSG00000022089.10	Bin3	chr14	protein_coding	bridging integrator 3
chr14	70361491	70361632	+	70361330	70361632	A5SS	0.33	50	50	ENSMUST00000022680.9	ENSMUSG00000022089.10	Bin3	chr14	protein_coding	bridging integrator 3
chr14	70366443	70366967	+	70366435	70366967	A5SS	0.5	50	50	ENSMUST00000022680.9	ENSMUSG00000022089.10	Bin3	chr14	protein_coding	bridging integrator 3
chr14	70356101;70361491	70361290;70361632	+	70356101	70361632	cassetteExon	0.5	100	100	ENSMUST00000227841.2	ENSMUSG00000022089.10	Bin3	chr14	protein_coding	bridging integrator 3
chr14	70356101	70361632	+	70361330	70361632	A5SS&ES	0.33	50	50	ENSMUST00000226385.2	ENSMUSG00000022089.10	Bin3	chr14	protein_coding	bridging integrator 3
chr14	70393405	70393865	-	70393405;70393725	70393610;70393865	ES	0.5	50	50	ENSMUST00000058240.14	ENSMUSG00000044551.14	9930012K11Rik	chr14	protein_coding	RIKEN cDNA 9930012K11 gene
chr14	70393402	70393610	-	70393405	70393610	A3SS	0.5	50	50	ENSMUST00000058240.14	ENSMUSG00000044551.14	9930012K11Rik	chr14	protein_coding	RIKEN cDNA 9930012K11 gene
chr14	70393405	70393865	-	70393725	70393865	A3SS&ES	0.5	50	50	ENSMUST00000153871.2	ENSMUSG00000044551.14	9930012K11Rik	chr14	protein_coding	RIKEN cDNA 9930012K11 gene
chr14	70405234	70405414	-	70405237	70405414	A3SS	0.5	50	50	ENSMUST00000022681.11	ENSMUSG00000022090.11	Pdlim2	chr14	protein_coding	PDZ and LIM domain 2
chr14	70412756	70414128	-	70412756	70415058	A5SS	0.5	50	50	ENSMUST00000022681.11	ENSMUSG00000022090.11	Pdlim2	chr14	protein_coding	PDZ and LIM domain 2
chr14	70405234	70405389	-	70405234	70405414	A5SS	0.5	50	50	ENSMUST00000127836.8	ENSMUSG00000022090.11	Pdlim2	chr14	protein_coding	PDZ and LIM domain 2
chr14	70440865	70444973	-	70440865	70443211	5pMXE	0.33	50	50	ENSMUST00000227653.2	ENSMUSG00000022091.7	Sorbs3	chr14	protein_coding	sorbin and SH3 domain containing 3
chr14	70440865	70441928	-	70440865	70443211	A5SS	0.33	50	50	ENSMUST00000227653.2	ENSMUSG00000022091.7	Sorbs3	chr14	protein_coding	sorbin and SH3 domain containing 3
chr14	70440865	70441928	-	70440865	70444973	A5SS	0.33	50	50	ENSMUST00000022682.6	ENSMUSG00000022091.7	Sorbs3	chr14	protein_coding	sorbin and SH3 domain containing 3
chr14	70445461	70446233	+	70445461	70485078	A3SS	0.5	50	50	ENSMUST00000226259.2	ENSMUSG00000115186.2	Gm49417	chr14	lncRNA	predicted gene, 49417
chr14	70462497	70472589	-	70462497;70463403	70463377;70472589	ES	0.5	50	50	ENSMUST00000228911.2	ENSMUSG00000022092.12	Ppp3cc	chr14	protein_coding	protein phosphatase 3, catalytic subunit, gamma isoform
chr14	70461380	70461759	-	70457495	70461759	A3SS	0.5	50	50	ENSMUST00000228911.2	ENSMUSG00000022092.12	Ppp3cc	chr14	protein_coding	protein phosphatase 3, catalytic subunit, gamma isoform
chr14	70556389	70588729	-	70556389;70568815	70568718;70588729	ES	0.5	50	50	ENSMUST00000068044.14	ENSMUSG00000022094.16	Slc39a14	chr14	protein_coding	solute carrier family 39 (zinc transporter), member 14
chr14	70548424;70553282	70553113;70553887	-	70548424;70551219	70551050;70553887	MXE	0.5	100	100	ENSMUST00000068044.14	ENSMUSG00000022094.16	Slc39a14	chr14	protein_coding	solute carrier family 39 (zinc transporter), member 14
chr14	70556389	70561160	-	70556389	70568718	A5SS	0.33	50	50	ENSMUST00000068044.14	ENSMUSG00000022094.16	Slc39a14	chr14	protein_coding	solute carrier family 39 (zinc transporter), member 14
chr14	70568815	70571519	-	70568815	70588729	A5SS	0.33	50	50	ENSMUST00000068044.14	ENSMUSG00000022094.16	Slc39a14	chr14	protein_coding	solute carrier family 39 (zinc transporter), member 14
chr14	70568815	70585772	-	70568815	70588729	A5SS	0.33	50	50	ENSMUST00000068044.14	ENSMUSG00000022094.16	Slc39a14	chr14	protein_coding	solute carrier family 39 (zinc transporter), member 14
chr14	70568815	70571519	-	70568815	70585772	A5SS	0.33	50	50	ENSMUST00000152067.8	ENSMUSG00000022094.16	Slc39a14	chr14	protein_coding	solute carrier family 39 (zinc transporter), member 14
chr14	70548424	70553113	-	70548424	70551050	5pMXE	0.5	50	50	ENSMUST00000145040.2	ENSMUSG00000022094.16	Slc39a14	chr14	protein_coding	solute carrier family 39 (zinc transporter), member 14
chr14	70556389	70561160	-	70556389	70588729	A5SS	0.33	50	50	ENSMUST00000146453.2	ENSMUSG00000022094.16	Slc39a14	chr14	protein_coding	solute carrier family 39 (zinc transporter), member 14
chr14	70551219	70553887	-	70553282	70553887	3pMXE	0.5	50	50	ENSMUST00000152202.8	ENSMUSG00000022094.16	Slc39a14	chr14	protein_coding	solute carrier family 39 (zinc transporter), member 14
chr14	70556389	70588729	-	70556389	70568718	5pMXE	0.33	50	50	ENSMUST00000139284.2	ENSMUSG00000022094.16	Slc39a14	chr14	protein_coding	solute carrier family 39 (zinc transporter), member 14
chr14	70556389	70588729	-	70568815	70588729	3pMXE	0.5	50	50	ENSMUST00000142598.2	ENSMUSG00000022094.16	Slc39a14	chr14	protein_coding	solute carrier family 39 (zinc transporter), member 14
chr14	70664192	70666771	-	70664192	70666392	5pMXE	0.33	50	50	ENSMUST00000048129.6	ENSMUSG00000033644.6	Piwil2	chr14	protein_coding	piwi-like RNA-mediated gene silencing 2
chr14	70664192	70666083	-	70664192	70666392	A5SS	0.33	50	50	ENSMUST00000048129.6	ENSMUSG00000033644.6	Piwil2	chr14	protein_coding	piwi-like RNA-mediated gene silencing 2
chr14	70664192	70666083	-	70664192	70666771	A5SS	0.33	50	50	ENSMUST00000226229.2	ENSMUSG00000033644.6	Piwil2	chr14	protein_coding	piwi-like RNA-mediated gene silencing 2
chr14	70696034	70699179	+	70695243	70699179	A5SS	0.5	50	50	ENSMUST00000003561.10	ENSMUSG00000003469.10	Phyhip	chr14	protein_coding	phytanoyl-CoA hydroxylase interacting protein
chr14	70723712	70727460	-	70724370	70727460	A3SS	0.5	50	50	ENSMUST00000226906.2	ENSMUSG00000022098.11	Bmp1	chr14	protein_coding	bone morphogenetic protein 1
chr14	70727691	70727987	-	70727640	70727987	A3SS	0.5	50	50	ENSMUST00000226906.2	ENSMUSG00000022098.11	Bmp1	chr14	protein_coding	bone morphogenetic protein 1
chr14	70745617	70745896	-	70745654	70745896	A3SS	0.5	50	50	ENSMUST00000226906.2	ENSMUSG00000022098.11	Bmp1	chr14	protein_coding	bone morphogenetic protein 1
chr14	70724370	70725910	-	70724370	70727460	A5SS	0.5	50	50	ENSMUST00000226906.2	ENSMUSG00000022098.11	Bmp1	chr14	protein_coding	bone morphogenetic protein 1
chr14	70723712;70724370	70723994;70727460	-	70723712	70727460	cassetteExon	0.5	100	100	ENSMUST00000022693.9	ENSMUSG00000022098.11	Bmp1	chr14	protein_coding	bone morphogenetic protein 1
chr14	70723712	70727460	-	70723712	70723994	5pMXE	0.5	50	50	ENSMUST00000228501.2	ENSMUSG00000022098.11	Bmp1	chr14	protein_coding	bone morphogenetic protein 1
chr14	70770688	70770785	+	70770688	70770771	A3SS	0.5	50	50	ENSMUST00000226376.2	ENSMUSG00000033595.8	Lgi3	chr14	protein_coding	leucine-rich repeat LGI family, member 3
chr14	70770286	70770617	+	70770542	70770617	A5SS	0.5	50	50	ENSMUST00000226376.2	ENSMUSG00000033595.8	Lgi3	chr14	protein_coding	leucine-rich repeat LGI family, member 3
chr14	70789764;70790382	70790280;70791952	+	70789764	70791952	cassetteExon	0.5	100	100	ENSMUST00000159959.2	ENSMUSG00000022096.15	Hr	chr14	protein_coding	lysine demethylase and nuclear receptor corepressor
chr14	70791552	70791952	+	70789764	70791952	A5SS	0.33	50	50	ENSMUST00000159959.2	ENSMUSG00000022096.15	Hr	chr14	protein_coding	lysine demethylase and nuclear receptor corepressor
chr14	70791552	70791952	+	70790382	70791952	A5SS	0.33	50	50	ENSMUST00000161468.2	ENSMUSG00000022096.15	Hr	chr14	protein_coding	lysine demethylase and nuclear receptor corepressor
chr14	70815550	70816774	+	70815550;70816565	70816352;70816774	ES	0.5	50	50	ENSMUST00000089049.4	ENSMUSG00000045211.6	Nudt18	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 18
chr14	70815947	70816352	+	70815550	70816352	A5SS	0.5	50	50	ENSMUST00000089049.4	ENSMUSG00000045211.6	Nudt18	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 18
chr14	70815550	70816774	+	70816565	70816774	A5SS&ES	0.5	50	50	ENSMUST00000228768.2	ENSMUSG00000045211.6	Nudt18	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 18
chr14	70842488	70842981	-	70842488;70842802	70842737;70842981	ES	0.5	50	50	ENSMUST00000022694.17	ENSMUSG00000022099.18	Dmtn	chr14	protein_coding	dematin actin binding protein
chr14	70852730	70853514	-	70852730;70853153	70853054;70853514	ES	0.5	50	50	ENSMUST00000022694.17	ENSMUSG00000022099.18	Dmtn	chr14	protein_coding	dematin actin binding protein
chr14	70854880	70855679	-	70854880;70855469	70855395;70855679	ES	0.5	50	50	ENSMUST00000022694.17	ENSMUSG00000022099.18	Dmtn	chr14	protein_coding	dematin actin binding protein
chr14	70855848	70866360	-	70855848	70864179	5pMXE	0.25	50	50	ENSMUST00000022694.17	ENSMUSG00000022099.18	Dmtn	chr14	protein_coding	dematin actin binding protein
chr14	70855848	70873260	-	70855848	70864179	5pMXE	0.25	50	50	ENSMUST00000022694.17	ENSMUSG00000022099.18	Dmtn	chr14	protein_coding	dematin actin binding protein
chr14	70842812	70843133	-	70842988	70843133	A3SS&ES	0.5	50	50	ENSMUST00000022694.17	ENSMUSG00000022099.18	Dmtn	chr14	protein_coding	dematin actin binding protein
chr14	70855848	70863458	-	70855848	70864179	A5SS	0.25	50	50	ENSMUST00000022694.17	ENSMUSG00000022099.18	Dmtn	chr14	protein_coding	dematin actin binding protein
chr14	70842488;70842812	70842737;70843133	-	70842488;70842988	70842981;70843133	MXE	0.5	100	100	ENSMUST00000110984.4	ENSMUSG00000022099.18	Dmtn	chr14	protein_coding	dematin actin binding protein
chr14	70855848	70863458	-	70855848	70873260	A5SS	0.25	50	50	ENSMUST00000022695.16	ENSMUSG00000022099.18	Dmtn	chr14	protein_coding	dematin actin binding protein
chr14	70855848	70866360	-	70855848	70873260	A5SS	0.25	50	50	ENSMUST00000022695.16	ENSMUSG00000022099.18	Dmtn	chr14	protein_coding	dematin actin binding protein
chr14	70855848	70863458	-	70855848	70866360	A5SS	0.25	50	50	ENSMUST00000228824.2	ENSMUSG00000022099.18	Dmtn	chr14	protein_coding	dematin actin binding protein
chr14	70854880	70855679	-	70855469	70855679	3pMXE	0.5	50	50	ENSMUST00000226543.2	ENSMUSG00000022099.18	Dmtn	chr14	protein_coding	dematin actin binding protein
chr14	70876386	70878972	-	70876419	70878972	A3SS	0.5	50	50	ENSMUST00000022697.7	ENSMUSG00000022101.7	Fgf17	chr14	protein_coding	fibroblast growth factor 17
chr14	70890135	70896646	-	70890135	70890461	5pMXE	0.5	50	50	ENSMUST00000062629.5	ENSMUSG00000047911.7	Npm2	chr14	protein_coding	nucleophosmin/nucleoplasmin 2
chr14	70925760	70928422	-	70925763	70928422	A3SS	0.5	50	50	ENSMUST00000167242.8	ENSMUSG00000022100.15	Xpo7	chr14	protein_coding	exportin 7
chr14	70944873	70945391	-	70944873	71003952	A5SS	0.5	50	50	ENSMUST00000167242.8	ENSMUSG00000022100.15	Xpo7	chr14	protein_coding	exportin 7
chr14	71009187	71009458	+	71009187	71010684	A3SS	0.5	50	50	ENSMUST00000171481.2	ENSMUSG00000022102.14	Dok2	chr14	protein_coding	docking protein 2
chr14	71011949	71012906	+	71010804	71012906	A5SS	0.5	50	50	ENSMUST00000169106.2	ENSMUSG00000022102.14	Dok2	chr14	protein_coding	docking protein 2
chr14	71013713	71014256	+	71013511	71014256	A5SS	0.33	50	50	ENSMUST00000022698.8	ENSMUSG00000022102.14	Dok2	chr14	protein_coding	docking protein 2
chr14	71013872	71014256	+	71013511	71014256	A5SS	0.33	50	50	ENSMUST00000022698.8	ENSMUSG00000022102.14	Dok2	chr14	protein_coding	docking protein 2
chr14	71013872	71014256	+	71013713	71014256	A5SS	0.33	50	50	ENSMUST00000165654.8	ENSMUSG00000022102.14	Dok2	chr14	protein_coding	docking protein 2
chr14	71179392	71203647	+	71163512	71203647	A5SS	0.5	50	50	ENSMUST00000022699.10	ENSMUSG00000022103.11	Gfra2	chr14	protein_coding	glial cell line derived neurotrophic factor family receptor alpha 2
chr14	71128334	71133212	+	71128334	71163158	A3SS	0.5	50	50	ENSMUST00000227697.2	ENSMUSG00000022103.11	Gfra2	chr14	protein_coding	glial cell line derived neurotrophic factor family receptor alpha 2
chr14	71139012	71163158	+	71128334	71163158	A5SS	0.5	50	50	ENSMUST00000227697.2	ENSMUSG00000022103.11	Gfra2	chr14	protein_coding	glial cell line derived neurotrophic factor family receptor alpha 2
chr14	71488747;71495609	71495471;71507997	+	71488747	71507997	cassetteExon	0.5	100	100	ENSMUST00000228402.2	ENSMUSG00000115139.2	Gm4251	chr14	lncRNA	predicted gene 4251
chr14	72094297	72096795	+	72094297	72099063	A3SS	0.5	50	50	ENSMUST00000228500.2	ENSMUSG00000115304.2	4930434J06Rik	chr14	lncRNA	RIKEN cDNA 4930434J06 gene
chr14	72136295	72139316	+	72136295	72157680	A3SS	0.5	50	50	ENSMUST00000228500.2	ENSMUSG00000115304.2	4930434J06Rik	chr14	lncRNA	RIKEN cDNA 4930434J06 gene
chr14	72097428	72099063	+	72094297	72099063	A5SS	0.5	50	50	ENSMUST00000228500.2	ENSMUSG00000115304.2	4930434J06Rik	chr14	lncRNA	RIKEN cDNA 4930434J06 gene
chr14	72150589	72157680	+	72136295	72157680	A5SS	0.5	50	50	ENSMUST00000228500.2	ENSMUSG00000115304.2	4930434J06Rik	chr14	lncRNA	RIKEN cDNA 4930434J06 gene
chr14	72094297	72099063	+	72094297;72097428	72096795;72099063	ES	0.5	50	50	ENSMUST00000227287.2	ENSMUSG00000115304.2	4930434J06Rik	chr14	lncRNA	RIKEN cDNA 4930434J06 gene
chr14	72836582	72840362	-	72836582	72889456	A5SS	0.5	50	50	ENSMUST00000089017.12	ENSMUSG00000033487.15	Fndc3a	chr14	protein_coding	fibronectin type III domain containing 3A
chr14	72921211	72946834	-	72921211	72947158	A5SS	0.5	50	50	ENSMUST00000089017.12	ENSMUSG00000033487.15	Fndc3a	chr14	protein_coding	fibronectin type III domain containing 3A
chr14	72822284	72827194	-	72812120	72827194	A3SS	0.5	50	50	ENSMUST00000161550.2	ENSMUSG00000033487.15	Fndc3a	chr14	protein_coding	fibronectin type III domain containing 3A
chr14	72812120	72820397	-	72812120	72827194	A5SS	0.5	50	50	ENSMUST00000161550.2	ENSMUSG00000033487.15	Fndc3a	chr14	protein_coding	fibronectin type III domain containing 3A
chr14	73271888	73285964	-	73271888;73272811	73272713;73285964	ES	0.33	50	50	ENSMUST00000226727.2	ENSMUSG00000033470.13	Cysltr2	chr14	protein_coding	cysteinyl leukotriene receptor 2
chr14	73271888;73285705	73285649;73285964	-	73271888;73272811	73272713;73285964	MXE	0.5	100	100	ENSMUST00000226727.2	ENSMUSG00000033470.13	Cysltr2	chr14	protein_coding	cysteinyl leukotriene receptor 2
chr14	73271888	73285964	-	73271888;73285705	73285649;73285964	ES	0.33	50	50	ENSMUST00000044664.12	ENSMUSG00000033470.13	Cysltr2	chr14	protein_coding	cysteinyl leukotriene receptor 2
chr14	73392334	73399380	+	73392334;73395885	73395828;73399380	ES	0.33	50	50	ENSMUST00000163339.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73392334;73398084	73397942;73399380	+	73392334;73395885	73395828;73399380	MXE	0.5	100	100	ENSMUST00000163339.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73389055	73391760	+	73389055	73391755	A3SS	0.5	50	50	ENSMUST00000163339.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73376540	73388973	+	73380163	73388973	A5SS&ES	0.16	50	50	ENSMUST00000163339.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73380033	73388973	+	73380163	73388973	A5SS&ES	0.16	50	50	ENSMUST00000163339.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73380262	73388973	+	73380163	73388973	A5SS	0.16	50	50	ENSMUST00000163339.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73380628	73388973	+	73380163	73388973	A5SS	0.16	50	50	ENSMUST00000163339.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73380628	73391755	+	73389055	73391755	A5SS&ES	0.5	50	50	ENSMUST00000163339.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73381270	73388973	+	73380163	73388973	A5SS	0.16	50	50	ENSMUST00000163339.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73391850	73392271	+	73391848	73392271	A5SS	0.5	50	50	ENSMUST00000163339.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73380033	73388973	+	73376540	73388973	A5SS	0.16	50	50	ENSMUST00000163650.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73380262	73388973	+	73376540	73388973	A5SS	0.16	50	50	ENSMUST00000163650.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73380628	73388973	+	73376540	73388973	A5SS	0.16	50	50	ENSMUST00000163650.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73381270	73388973	+	73376540	73388973	A5SS	0.16	50	50	ENSMUST00000163650.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73399535	73420245	+	73399535	73399767	3pMXE	0.5	50	50	ENSMUST00000171070.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73392334;73398084	73397942;73399380	+	73392334	73399380	cassetteExon	0.5	100	100	ENSMUST00000171070.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73380628	73399767	+	73399535	73399767	A5SS&ES	0.5	50	50	ENSMUST00000171070.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73399917	73403920	+	73399917	73402124	3pMXE	0.33	50	50	ENSMUST00000170370.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73399917	73403972	+	73399917	73402124	3pMXE	0.33	50	50	ENSMUST00000170370.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73380262	73388973	+	73380033	73388973	A5SS	0.16	50	50	ENSMUST00000170370.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73380628	73388973	+	73380033	73388973	A5SS	0.16	50	50	ENSMUST00000170370.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73381270	73388973	+	73380033	73388973	A5SS	0.16	50	50	ENSMUST00000170370.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73399917	73403920	+	73399917;73402290	73402124;73403920	ES	0.5	50	50	ENSMUST00000164822.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73404312	73411163	+	73404312;73405572	73405430;73411163	ES	0.5	50	50	ENSMUST00000164822.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73414574	73419899	+	73414574;73416003	73415873;73419899	ES	0.5	50	50	ENSMUST00000164822.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73416003	73444632	+	73416003	73419899	3pMXE	0.5	50	50	ENSMUST00000164822.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73380628	73391755	+	73380628;73389055	73388973;73391755	ES	0.5	50	50	ENSMUST00000163546.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73380262	73388973	+	73380628	73388973	A5SS	0.16	50	50	ENSMUST00000163546.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73381270	73388973	+	73380628	73388973	A5SS	0.16	50	50	ENSMUST00000163546.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73381270	73388973	+	73380262	73388973	A5SS	0.16	50	50	ENSMUST00000170368.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73414574	73419899	+	73414574	73415873	A3SS&ES	0.5	50	50	ENSMUST00000171767.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73380628	73399767	+	73380628	73391755	3pMXE	0.33	50	50	ENSMUST00000165334.2	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73380628	73399767	+	73380628	73388973	A3SS&ES	0.33	50	50	ENSMUST00000167401.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73399917	73403972	+	73399917	73403920	A3SS	0.33	50	50	ENSMUST00000165727.8	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73380628	73391755	+	73380628	73388973	A3SS&ES	0.33	50	50	ENSMUST00000022702.13	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73414574	73419899	+	73416003	73419899	A5SS	0.5	50	50	ENSMUST00000170278.2	ENSMUSG00000022106.15	Rcbtb2	chr14	protein_coding	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr14	73559583	73562963	-	73520418	73562963	A3SS	0.5	50	50	ENSMUST00000164624.2	ENSMUSG00000022105.7	Rb1	chr14	protein_coding	RB transcriptional corepressor 1
chr14	73520418	73525043	-	73520418	73562963	A5SS	0.5	50	50	ENSMUST00000164624.2	ENSMUSG00000022105.7	Rb1	chr14	protein_coding	RB transcriptional corepressor 1
chr14	73618226	73622450	-	73605867	73622450	A3SS	0.5	50	50	ENSMUST00000022704.9	ENSMUSG00000022108.9	Itm2b	chr14	protein_coding	integral membrane protein 2B
chr14	73605867	73606443	-	73605867	73622450	A5SS	0.33	50	50	ENSMUST00000022704.9	ENSMUSG00000022108.9	Itm2b	chr14	protein_coding	integral membrane protein 2B
chr14	73605867	73613244	-	73605867	73622450	A5SS	0.33	50	50	ENSMUST00000022704.9	ENSMUSG00000022108.9	Itm2b	chr14	protein_coding	integral membrane protein 2B
chr14	73605867	73606443	-	73605867	73613244	A5SS	0.33	50	50	ENSMUST00000227454.2	ENSMUSG00000022108.9	Itm2b	chr14	protein_coding	integral membrane protein 2B
chr14	73759114	73762500	-	73759114;73760934	73760738;73762500	ES	0.5	50	50	ENSMUST00000043813.3	ENSMUSG00000033405.5	Nudt15	chr14	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 15
chr14	73790337	73797881	+	73767631	73797881	A5SS	0.5	50	50	ENSMUST00000162691.2	ENSMUSG00000022110.14	Sucla2	chr14	protein_coding	succinate-Coenzyme A ligase, ADP-forming, beta subunit
chr14	73790337	73797881	+	73790337	73793460	3pMXE	0.5	50	50	ENSMUST00000162723.2	ENSMUSG00000022110.14	Sucla2	chr14	protein_coding	succinate-Coenzyme A ligase, ADP-forming, beta subunit
chr14	73832913	73833113	+	73832913	73833138	A3SS	0.5	50	50	ENSMUST00000022706.7	ENSMUSG00000022110.14	Sucla2	chr14	protein_coding	succinate-Coenzyme A ligase, ADP-forming, beta subunit
chr14	74125074	74192460	+	74083600	74192460	A5SS	0.33	50	50	ENSMUST00000226696.2	ENSMUSG00000115289.2	Gm49164	chr14	lncRNA	predicted gene, 49164
chr14	74146926	74192460	+	74083600	74192460	A5SS	0.33	50	50	ENSMUST00000226696.2	ENSMUSG00000115289.2	Gm49164	chr14	lncRNA	predicted gene, 49164
chr14	74146926	74192460	+	74125074	74192460	A5SS	0.33	50	50	ENSMUST00000228430.2	ENSMUSG00000115289.2	Gm49164	chr14	lncRNA	predicted gene, 49164
chr14	74980778	74982990	+	74980778;74982186	74982088;74982990	ES	0.33	50	50	ENSMUST00000022573.17	ENSMUSG00000021996.17	Esd	chr14	protein_coding	esterase D/formylglutathione hydrolase
chr14	74975957	74976369	+	74975957	74978597	A3SS	0.5	50	50	ENSMUST00000022573.17	ENSMUSG00000021996.17	Esd	chr14	protein_coding	esterase D/formylglutathione hydrolase
chr14	74983157	74987099	+	74983157	74987085	A3SS	0.5	50	50	ENSMUST00000022573.17	ENSMUSG00000021996.17	Esd	chr14	protein_coding	esterase D/formylglutathione hydrolase
chr14	74969961	74973400	+	74969828	74973400	A5SS	0.33	50	50	ENSMUST00000022573.17	ENSMUSG00000021996.17	Esd	chr14	protein_coding	esterase D/formylglutathione hydrolase
chr14	74973139	74973400	+	74969828	74973400	A5SS	0.33	50	50	ENSMUST00000022573.17	ENSMUSG00000021996.17	Esd	chr14	protein_coding	esterase D/formylglutathione hydrolase
chr14	74983161	74987085	+	74983157	74987085	A5SS	0.33	50	50	ENSMUST00000022573.17	ENSMUSG00000021996.17	Esd	chr14	protein_coding	esterase D/formylglutathione hydrolase
chr14	74979578	74987085	+	74979578	74982990	3pMXE	0.33	50	50	ENSMUST00000175712.8	ENSMUSG00000021996.17	Esd	chr14	protein_coding	esterase D/formylglutathione hydrolase
chr14	74979578;74980778	74980659;74982990	+	74979578	74982990	cassetteExon	0.5	100	100	ENSMUST00000175712.8	ENSMUSG00000021996.17	Esd	chr14	protein_coding	esterase D/formylglutathione hydrolase
chr14	74982186	74982990	+	74979578	74982990	A5SS	0.33	50	50	ENSMUST00000175712.8	ENSMUSG00000021996.17	Esd	chr14	protein_coding	esterase D/formylglutathione hydrolase
chr14	74973139	74973400	+	74969961	74973400	A5SS	0.33	50	50	ENSMUST00000176957.8	ENSMUSG00000021996.17	Esd	chr14	protein_coding	esterase D/formylglutathione hydrolase
chr14	74979578	74987085	+	74979578	74980659	A3SS&ES	0.33	50	50	ENSMUST00000177181.8	ENSMUSG00000021996.17	Esd	chr14	protein_coding	esterase D/formylglutathione hydrolase
chr14	74979578	74982990	+	74979578	74980659	3pMXE	0.33	50	50	ENSMUST00000176188.2	ENSMUSG00000021996.17	Esd	chr14	protein_coding	esterase D/formylglutathione hydrolase
chr14	74979578;74983157	74982990;74987085	+	74979578	74987085	cassetteExon	0.5	100	100	ENSMUST00000176726.2	ENSMUSG00000021996.17	Esd	chr14	protein_coding	esterase D/formylglutathione hydrolase
chr14	74979578;74983161	74982990;74987085	+	74979578	74987085	cassetteExon	0.5	100	100	ENSMUST00000176726.2	ENSMUSG00000021996.17	Esd	chr14	protein_coding	esterase D/formylglutathione hydrolase
chr14	75023830	75032737	-	75023830;75032431	75032351;75032737	ES	0.25	50	50	ENSMUST00000088970.7	ENSMUSG00000068015.9	Lrch1	chr14	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 1
chr14	75023830;75030624	75030567;75032351	-	75023830	75032351	cassetteExon	0.5	100	100	ENSMUST00000088970.7	ENSMUSG00000068015.9	Lrch1	chr14	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 1
chr14	75023830;75030624	75030567;75032737	-	75023830;75032431	75032351;75032737	MXE	0.5	100	100	ENSMUST00000088970.7	ENSMUSG00000068015.9	Lrch1	chr14	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 1
chr14	75023830;75030671	75030567;75032737	-	75023830;75032431	75032351;75032737	MXE	0.5	100	100	ENSMUST00000088970.7	ENSMUSG00000068015.9	Lrch1	chr14	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 1
chr14	75002687	75013021	-	74994583	75013021	A3SS	0.5	50	50	ENSMUST00000088970.7	ENSMUSG00000068015.9	Lrch1	chr14	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 1
chr14	75042992	75043410	-	75042992	75044914	A5SS	0.5	50	50	ENSMUST00000088970.7	ENSMUSG00000068015.9	Lrch1	chr14	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 1
chr14	75095561	75122597	-	75095561	75184824	A5SS	0.33	50	50	ENSMUST00000088970.7	ENSMUSG00000068015.9	Lrch1	chr14	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 1
chr14	75095561	75136872	-	75095561	75184824	A5SS	0.33	50	50	ENSMUST00000088970.7	ENSMUSG00000068015.9	Lrch1	chr14	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 1
chr14	75095561	75136872	-	75095561	75122597	5pMXE	0.33	50	50	ENSMUST00000228134.2	ENSMUSG00000068015.9	Lrch1	chr14	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 1
chr14	75023830;75030624	75030567;75032737	-	75023830	75032737	cassetteExon	0.5	100	100	ENSMUST00000228134.2	ENSMUSG00000068015.9	Lrch1	chr14	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 1
chr14	75023830;75030671	75030567;75032737	-	75023830	75032737	cassetteExon	0.5	100	100	ENSMUST00000228134.2	ENSMUSG00000068015.9	Lrch1	chr14	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 1
chr14	75030624	75032737	-	75030624	75032351	5pMXE	0.5	50	50	ENSMUST00000230218.2	ENSMUSG00000068015.9	Lrch1	chr14	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 1
chr14	75030624	75032737	-	75030671	75032737	A3SS	0.25	50	50	ENSMUST00000229311.2	ENSMUSG00000068015.9	Lrch1	chr14	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 1
chr14	75030624;75032431	75032351;75032737	-	75030624	75032737	cassetteExon	0.5	100	100	ENSMUST00000230381.2	ENSMUSG00000068015.9	Lrch1	chr14	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 1
chr14	75369151	75435517	+	75368644	75435517	A5SS	0.25	50	50	ENSMUST00000143539.8	ENSMUSG00000021998.17	Lcp1	chr14	protein_coding	lymphocyte cytosolic protein 1
chr14	75414373	75435517	+	75368644	75435517	A5SS	0.25	50	50	ENSMUST00000143539.8	ENSMUSG00000021998.17	Lcp1	chr14	protein_coding	lymphocyte cytosolic protein 1
chr14	75427977	75435517	+	75368644	75435517	A5SS	0.25	50	50	ENSMUST00000143539.8	ENSMUSG00000021998.17	Lcp1	chr14	protein_coding	lymphocyte cytosolic protein 1
chr14	75369151	75414255	+	75369151	75382615	3pMXE	0.33	50	50	ENSMUST00000124608.2	ENSMUSG00000021998.17	Lcp1	chr14	protein_coding	lymphocyte cytosolic protein 1
chr14	75369151	75435517	+	75369151	75382615	3pMXE	0.33	50	50	ENSMUST00000124608.2	ENSMUSG00000021998.17	Lcp1	chr14	protein_coding	lymphocyte cytosolic protein 1
chr14	75369151	75414255	+	75412761	75414255	A5SS&ES	0.2	50	50	ENSMUST00000134114.8	ENSMUSG00000021998.17	Lcp1	chr14	protein_coding	lymphocyte cytosolic protein 1
chr14	75369151	75435517	+	75414373	75435517	A5SS&ES	0.25	50	50	ENSMUST00000134114.8	ENSMUSG00000021998.17	Lcp1	chr14	protein_coding	lymphocyte cytosolic protein 1
chr14	75374082	75412697	+	75368656	75412697	A5SS	0.5	50	50	ENSMUST00000134114.8	ENSMUSG00000021998.17	Lcp1	chr14	protein_coding	lymphocyte cytosolic protein 1
chr14	75374082	75414255	+	75412761	75414255	A5SS&ES	0.2	50	50	ENSMUST00000134114.8	ENSMUSG00000021998.17	Lcp1	chr14	protein_coding	lymphocyte cytosolic protein 1
chr14	75412478	75414255	+	75412761	75414255	A5SS&ES	0.2	50	50	ENSMUST00000134114.8	ENSMUSG00000021998.17	Lcp1	chr14	protein_coding	lymphocyte cytosolic protein 1
chr14	75414154	75414255	+	75412761	75414255	A5SS	0.2	50	50	ENSMUST00000134114.8	ENSMUSG00000021998.17	Lcp1	chr14	protein_coding	lymphocyte cytosolic protein 1
chr14	75427977	75435517	+	75414373	75435517	A5SS	0.25	50	50	ENSMUST00000134114.8	ENSMUSG00000021998.17	Lcp1	chr14	protein_coding	lymphocyte cytosolic protein 1
chr14	75369151	75435517	+	75369151;75414373	75414255;75435517	ES	0.33	50	50	ENSMUST00000125833.8	ENSMUSG00000021998.17	Lcp1	chr14	protein_coding	lymphocyte cytosolic protein 1
chr14	75374082	75414255	+	75369151	75414255	A5SS	0.2	50	50	ENSMUST00000125833.8	ENSMUSG00000021998.17	Lcp1	chr14	protein_coding	lymphocyte cytosolic protein 1
chr14	75412478	75414255	+	75369151	75414255	A5SS	0.2	50	50	ENSMUST00000125833.8	ENSMUSG00000021998.17	Lcp1	chr14	protein_coding	lymphocyte cytosolic protein 1
chr14	75414154	75414255	+	75369151	75414255	A5SS	0.2	50	50	ENSMUST00000125833.8	ENSMUSG00000021998.17	Lcp1	chr14	protein_coding	lymphocyte cytosolic protein 1
chr14	75427977	75435517	+	75369151	75435517	A5SS	0.25	50	50	ENSMUST00000124499.8	ENSMUSG00000021998.17	Lcp1	chr14	protein_coding	lymphocyte cytosolic protein 1
chr14	75374082;75412761	75412697;75414255	+	75374082	75414255	cassetteExon	0.5	100	100	ENSMUST00000145303.8	ENSMUSG00000021998.17	Lcp1	chr14	protein_coding	lymphocyte cytosolic protein 1
chr14	75412478	75414255	+	75374082	75414255	A5SS	0.2	50	50	ENSMUST00000145303.8	ENSMUSG00000021998.17	Lcp1	chr14	protein_coding	lymphocyte cytosolic protein 1
chr14	75414154	75414255	+	75374082	75414255	A5SS	0.2	50	50	ENSMUST00000145303.8	ENSMUSG00000021998.17	Lcp1	chr14	protein_coding	lymphocyte cytosolic protein 1
chr14	75414154	75414255	+	75412478	75414255	A5SS	0.2	50	50	ENSMUST00000148609.2	ENSMUSG00000021998.17	Lcp1	chr14	protein_coding	lymphocyte cytosolic protein 1
chr14	75522105	75529009	+	75522105	75529012	A3SS	0.33	50	50	ENSMUST00000022577.6	ENSMUSG00000022000.12	Zc3h13	chr14	protein_coding	zinc finger CCCH type containing 13
chr14	75569658	75573362	+	75569658	75573365	A3SS	0.5	50	50	ENSMUST00000022577.6	ENSMUSG00000022000.12	Zc3h13	chr14	protein_coding	zinc finger CCCH type containing 13
chr14	75575637	75576749	+	75575010	75576749	A5SS	0.5	50	50	ENSMUST00000022577.6	ENSMUSG00000022000.12	Zc3h13	chr14	protein_coding	zinc finger CCCH type containing 13
chr14	75522105	75529009	+	75522105	75559037	A3SS	0.33	50	50	ENSMUST00000226417.2	ENSMUSG00000022000.12	Zc3h13	chr14	protein_coding	zinc finger CCCH type containing 13
chr14	75522105	75529012	+	75522105	75559037	A3SS	0.33	50	50	ENSMUST00000226417.2	ENSMUSG00000022000.12	Zc3h13	chr14	protein_coding	zinc finger CCCH type containing 13
chr14	75553518	75559037	+	75522105	75559037	A5SS	0.5	50	50	ENSMUST00000226417.2	ENSMUSG00000022000.12	Zc3h13	chr14	protein_coding	zinc finger CCCH type containing 13
chr14	75821675	75830036	-	75821675	75829355	5pMXE	0.25	50	50	ENSMUST00000035243.5	ENSMUSG00000034913.11	Cby2	chr14	protein_coding	chibby family member 2
chr14	75821675	75830425	-	75821675	75829355	5pMXE	0.25	50	50	ENSMUST00000035243.5	ENSMUSG00000034913.11	Cby2	chr14	protein_coding	chibby family member 2
chr14	75821675;75828425	75828276;75829355	-	75821675	75829355	cassetteExon	0.5	100	100	ENSMUST00000035243.5	ENSMUSG00000034913.11	Cby2	chr14	protein_coding	chibby family member 2
chr14	75828425	75829853	-	75828425	75829355	5pMXE	0.5	50	50	ENSMUST00000165569.3	ENSMUSG00000034913.11	Cby2	chr14	protein_coding	chibby family member 2
chr14	75821675	75830425	-	75821675;75830116	75830036;75830425	ES	0.5	50	50	ENSMUST00000164082.9	ENSMUSG00000034913.11	Cby2	chr14	protein_coding	chibby family member 2
chr14	75821675	75828276	-	75821675	75830036	A5SS	0.25	50	50	ENSMUST00000164082.9	ENSMUSG00000034913.11	Cby2	chr14	protein_coding	chibby family member 2
chr14	75821675	75828276	-	75821675	75830425	A5SS	0.25	50	50	ENSMUST00000169658.9	ENSMUSG00000034913.11	Cby2	chr14	protein_coding	chibby family member 2
chr14	75879728	75896058	+	75879728;75888401	75888351;75896058	ES	0.5	50	50	ENSMUST00000238633.2	ENSMUSG00000022002.3	Erich6b	chr14	protein_coding	glutamate rich 6B
chr14	75902725	75904338	+	75902725	75908755	A3SS	0.5	50	50	ENSMUST00000238633.2	ENSMUSG00000022002.3	Erich6b	chr14	protein_coding	glutamate rich 6B
chr14	76012582	76024365	-	76012582;76014566	76014436;76024365	ES	0.5	50	50	ENSMUST00000022580.8	ENSMUSG00000022003.8	Slc25a30	chr14	protein_coding	solute carrier family 25, member 30
chr14	76014134	76014436	-	76012582	76014436	A3SS	0.5	50	50	ENSMUST00000022580.8	ENSMUSG00000022003.8	Slc25a30	chr14	protein_coding	solute carrier family 25, member 30
chr14	76008973	76009658	-	76008973	76012435	A5SS	0.5	50	50	ENSMUST00000022580.8	ENSMUSG00000022003.8	Slc25a30	chr14	protein_coding	solute carrier family 25, member 30
chr14	76012582	76024365	-	76014566	76024365	3pMXE	0.5	50	50	ENSMUST00000228379.2	ENSMUSG00000022003.8	Slc25a30	chr14	protein_coding	solute carrier family 25, member 30
chr14	76082896	76083643	+	76082896;76083130	76083057;76083643	ES	0.33	50	50	ENSMUST00000110894.9	ENSMUSG00000060126.15	Tpt1	chr14	protein_coding	tumor protein, translationally-controlled 1
chr14	76083387	76083643	+	76083130	76083643	A5SS	0.33	50	50	ENSMUST00000110894.9	ENSMUSG00000060126.15	Tpt1	chr14	protein_coding	tumor protein, translationally-controlled 1
chr14	76082896;76083387	76083057;76083643	+	76082896	76083643	cassetteExon	0.5	100	100	ENSMUST00000142061.3	ENSMUSG00000060126.15	Tpt1	chr14	protein_coding	tumor protein, translationally-controlled 1
chr14	76082896	76083643	+	76082896	76083057	3pMXE	0.5	50	50	ENSMUST00000128889.2	ENSMUSG00000060126.15	Tpt1	chr14	protein_coding	tumor protein, translationally-controlled 1
chr14	76082896	76083643	+	76083387	76083643	5pMXE	0.33	50	50	ENSMUST00000134040.2	ENSMUSG00000060126.15	Tpt1	chr14	protein_coding	tumor protein, translationally-controlled 1
chr14	76656449	76675106	+	76656449	76742689	A3SS	0.2	50	50	ENSMUST00000110888.8	ENSMUSG00000022010.20	Tsc22d1	chr14	protein_coding	TSC22 domain family, member 1
chr14	76656449	76676376	+	76656449	76742689	A3SS	0.2	50	50	ENSMUST00000110888.8	ENSMUSG00000022010.20	Tsc22d1	chr14	protein_coding	TSC22 domain family, member 1
chr14	76656449	76676387	+	76656449	76742689	A3SS	0.2	50	50	ENSMUST00000110888.8	ENSMUSG00000022010.20	Tsc22d1	chr14	protein_coding	TSC22 domain family, member 1
chr14	76656449	76676404	+	76656449	76742689	A3SS	0.2	50	50	ENSMUST00000110888.8	ENSMUSG00000022010.20	Tsc22d1	chr14	protein_coding	TSC22 domain family, member 1
chr14	76714463	76742689	+	76656449	76742689	A5SS	0.16	50	50	ENSMUST00000110888.8	ENSMUSG00000022010.20	Tsc22d1	chr14	protein_coding	TSC22 domain family, member 1
chr14	76725364	76742689	+	76656449	76742689	A5SS	0.16	50	50	ENSMUST00000110888.8	ENSMUSG00000022010.20	Tsc22d1	chr14	protein_coding	TSC22 domain family, member 1
chr14	76726115	76742689	+	76656449	76742689	A5SS	0.16	50	50	ENSMUST00000110888.8	ENSMUSG00000022010.20	Tsc22d1	chr14	protein_coding	TSC22 domain family, member 1
chr14	76741733	76742689	+	76656449	76742689	A5SS	0.16	50	50	ENSMUST00000110888.8	ENSMUSG00000022010.20	Tsc22d1	chr14	protein_coding	TSC22 domain family, member 1
chr14	76742281	76742689	+	76656449	76742689	A5SS	0.16	50	50	ENSMUST00000110888.8	ENSMUSG00000022010.20	Tsc22d1	chr14	protein_coding	TSC22 domain family, member 1
chr14	76656449	76676387	+	76656449;76675255	76675106;76676387	ES	0.5	50	50	ENSMUST00000176886.2	ENSMUSG00000022010.20	Tsc22d1	chr14	protein_coding	TSC22 domain family, member 1
chr14	76656449	76676376	+	76656449	76675106	A3SS&ES	0.25	50	50	ENSMUST00000176886.2	ENSMUSG00000022010.20	Tsc22d1	chr14	protein_coding	TSC22 domain family, member 1
chr14	76656449	76676404	+	76656449	76675106	A3SS&ES	0.25	50	50	ENSMUST00000176886.2	ENSMUSG00000022010.20	Tsc22d1	chr14	protein_coding	TSC22 domain family, member 1
chr14	76675255	76676376	+	76675255	76676387	A3SS	0.5	50	50	ENSMUST00000176886.2	ENSMUSG00000022010.20	Tsc22d1	chr14	protein_coding	TSC22 domain family, member 1
chr14	76656449	76676376	+	76656449	76676404	A3SS	0.2	50	50	ENSMUST00000176581.2	ENSMUSG00000022010.20	Tsc22d1	chr14	protein_coding	TSC22 domain family, member 1
chr14	76656449	76676387	+	76656449	76676404	A3SS	0.2	50	50	ENSMUST00000176581.2	ENSMUSG00000022010.20	Tsc22d1	chr14	protein_coding	TSC22 domain family, member 1
chr14	76656449;76675255	76675106;76676376	+	76656449	76676376	cassetteExon	0.5	100	100	ENSMUST00000175984.2	ENSMUSG00000022010.20	Tsc22d1	chr14	protein_coding	TSC22 domain family, member 1
chr14	76656449	76676387	+	76656449	76676376	A3SS	0.25	50	50	ENSMUST00000175984.2	ENSMUSG00000022010.20	Tsc22d1	chr14	protein_coding	TSC22 domain family, member 1
chr14	76656449	76676376	+	76675255	76676376	5pMXE	0.5	50	50	ENSMUST00000175811.8	ENSMUSG00000022010.20	Tsc22d1	chr14	protein_coding	TSC22 domain family, member 1
chr14	76725364	76742689	+	76714463	76742689	A5SS	0.16	50	50	ENSMUST00000140251.9	ENSMUSG00000022010.20	Tsc22d1	chr14	protein_coding	TSC22 domain family, member 1
chr14	76726115	76742689	+	76714463	76742689	A5SS	0.16	50	50	ENSMUST00000140251.9	ENSMUSG00000022010.20	Tsc22d1	chr14	protein_coding	TSC22 domain family, member 1
chr14	76741733	76742689	+	76714463	76742689	A5SS	0.16	50	50	ENSMUST00000140251.9	ENSMUSG00000022010.20	Tsc22d1	chr14	protein_coding	TSC22 domain family, member 1
chr14	76742281	76742689	+	76714463	76742689	A5SS	0.16	50	50	ENSMUST00000140251.9	ENSMUSG00000022010.20	Tsc22d1	chr14	protein_coding	TSC22 domain family, member 1
chr14	76726115	76742689	+	76725364	76742689	A5SS	0.16	50	50	ENSMUST00000142683.8	ENSMUSG00000022010.20	Tsc22d1	chr14	protein_coding	TSC22 domain family, member 1
chr14	76741733	76742689	+	76725364	76742689	A5SS	0.16	50	50	ENSMUST00000142683.8	ENSMUSG00000022010.20	Tsc22d1	chr14	protein_coding	TSC22 domain family, member 1
chr14	76742281	76742689	+	76725364	76742689	A5SS	0.16	50	50	ENSMUST00000142683.8	ENSMUSG00000022010.20	Tsc22d1	chr14	protein_coding	TSC22 domain family, member 1
chr14	76741733	76742689	+	76726115	76742689	A5SS	0.16	50	50	ENSMUST00000101618.9	ENSMUSG00000022010.20	Tsc22d1	chr14	protein_coding	TSC22 domain family, member 1
chr14	76742281	76742689	+	76726115	76742689	A5SS	0.16	50	50	ENSMUST00000101618.9	ENSMUSG00000022010.20	Tsc22d1	chr14	protein_coding	TSC22 domain family, member 1
chr14	76742281	76742689	+	76741733	76742689	A5SS	0.16	50	50	ENSMUST00000177207.2	ENSMUSG00000022010.20	Tsc22d1	chr14	protein_coding	TSC22 domain family, member 1
chr14	76770686	76793871	-	76770686;76787494	76787422;76793871	ES	0.33	50	50	ENSMUST00000064517.9	ENSMUSG00000052584.11	Serp2	chr14	protein_coding	stress-associated endoplasmic reticulum protein family member 2
chr14	76770686;76777494	76777346;76787422	-	76770686	76787422	cassetteExon	0.5	100	100	ENSMUST00000064517.9	ENSMUSG00000052584.11	Serp2	chr14	protein_coding	stress-associated endoplasmic reticulum protein family member 2
chr14	76770686;76777494	76777346;76793871	-	76770686;76787494	76787422;76793871	MXE	0.5	100	100	ENSMUST00000064517.9	ENSMUSG00000052584.11	Serp2	chr14	protein_coding	stress-associated endoplasmic reticulum protein family member 2
chr14	76770686;76777494	76777346;76793871	-	76770686	76793871	cassetteExon	0.5	100	100	ENSMUST00000228055.2	ENSMUSG00000052584.11	Serp2	chr14	protein_coding	stress-associated endoplasmic reticulum protein family member 2
chr14	76777494	76793871	-	76777494;76787494	76787422;76793871	ES	0.33	50	50	ENSMUST00000227076.2	ENSMUSG00000052584.11	Serp2	chr14	protein_coding	stress-associated endoplasmic reticulum protein family member 2
chr14	76770686	76787422	-	76777494	76787422	3pMXE	0.5	50	50	ENSMUST00000227957.2	ENSMUSG00000052584.11	Serp2	chr14	protein_coding	stress-associated endoplasmic reticulum protein family member 2
chr14	76770686	76793871	-	76777494	76793871	3pMXE	0.33	50	50	ENSMUST00000228524.2	ENSMUSG00000052584.11	Serp2	chr14	protein_coding	stress-associated endoplasmic reticulum protein family member 2
chr14	76917038	76924274	+	76917038;76917760	76917566;76924274	ES	0.33	50	50	ENSMUST00000190818.7	ENSMUSG00000101009.7	1700108F19Rik	chr14	lncRNA	RIKEN cDNA 1700108F19 gene
chr14	76919349	76924274	+	76917760	76924274	A5SS	0.33	50	50	ENSMUST00000190818.7	ENSMUSG00000101009.7	1700108F19Rik	chr14	lncRNA	RIKEN cDNA 1700108F19 gene
chr14	76919349	76924274	+	76917038	76924274	A5SS	0.33	50	50	ENSMUST00000185213.7	ENSMUSG00000101009.7	1700108F19Rik	chr14	lncRNA	RIKEN cDNA 1700108F19 gene
chr14	76917038	76924274	+	76917038	76917566	3pMXE	0.5	50	50	ENSMUST00000188798.7	ENSMUSG00000101009.7	1700108F19Rik	chr14	lncRNA	RIKEN cDNA 1700108F19 gene
chr14	77306389;77326413	77326372;77329108	+	77306389	77329108	cassetteExon	0.5	100	100	ENSMUST00000048208.10	ENSMUSG00000034795.15	Ccdc122	chr14	protein_coding	coiled-coil domain containing 122
chr14	77348583	77348847	+	77330326	77348847	A5SS	0.33	50	50	ENSMUST00000048208.10	ENSMUSG00000034795.15	Ccdc122	chr14	protein_coding	coiled-coil domain containing 122
chr14	77306389	77326372	+	77306389	77348847	A3SS	0.33	50	50	ENSMUST00000095625.11	ENSMUSG00000034795.15	Ccdc122	chr14	protein_coding	coiled-coil domain containing 122
chr14	77306389	77329108	+	77306389	77348847	A3SS	0.33	50	50	ENSMUST00000095625.11	ENSMUSG00000034795.15	Ccdc122	chr14	protein_coding	coiled-coil domain containing 122
chr14	77330326	77348847	+	77306389	77348847	A5SS	0.33	50	50	ENSMUST00000095625.11	ENSMUSG00000034795.15	Ccdc122	chr14	protein_coding	coiled-coil domain containing 122
chr14	77348583	77348847	+	77306389	77348847	A5SS	0.33	50	50	ENSMUST00000095625.11	ENSMUSG00000034795.15	Ccdc122	chr14	protein_coding	coiled-coil domain containing 122
chr14	77830432	77852879	+	77830432;77848833	77848727;77852879	ES	0.5	50	50	ENSMUST00000022589.9	ENSMUSG00000022012.10	Enox1	chr14	protein_coding	ecto-NOX disulfide-thiol exchanger 1
chr14	77902166	77936635	+	77902166;77906233	77906177;77936635	ES	0.5	50	50	ENSMUST00000022589.9	ENSMUSG00000022012.10	Enox1	chr14	protein_coding	ecto-NOX disulfide-thiol exchanger 1
chr14	77852996;77870059	77870003;77875056	+	77852996	77875056	cassetteExon	0.5	100	100	ENSMUST00000022589.9	ENSMUSG00000022012.10	Enox1	chr14	protein_coding	ecto-NOX disulfide-thiol exchanger 1
chr14	77744387	77745580	+	77744387	77745577	A3SS	0.5	50	50	ENSMUST00000022589.9	ENSMUSG00000022012.10	Enox1	chr14	protein_coding	ecto-NOX disulfide-thiol exchanger 1
chr14	77602511	77618019	+	77549568	77618019	A5SS	0.5	50	50	ENSMUST00000022589.9	ENSMUSG00000022012.10	Enox1	chr14	protein_coding	ecto-NOX disulfide-thiol exchanger 1
chr14	77810557	77815052	+	77745714	77815052	A5SS	0.5	50	50	ENSMUST00000022589.9	ENSMUSG00000022012.10	Enox1	chr14	protein_coding	ecto-NOX disulfide-thiol exchanger 1
chr14	78090411	78112238	-	78090411;78094430	78094379;78112238	ES	0.5	50	50	ENSMUST00000226459.2	ENSMUSG00000022013.5	Dnajc15	chr14	protein_coding	DnaJ heat shock protein family (Hsp40) member C15
chr14	78063910;78065015	78064895;78077608	-	78063910	78077608	cassetteExon	0.5	100	100	ENSMUST00000226459.2	ENSMUSG00000022013.5	Dnajc15	chr14	protein_coding	DnaJ heat shock protein family (Hsp40) member C15
chr14	78201165	78201167	+	78201165	78210018	A3SS	0.5	50	50	ENSMUST00000022591.16	ENSMUSG00000022014.16	Epsti1	chr14	protein_coding	epithelial stromal interaction 1 (breast)
chr14	78322618	78324010	-	78322618	78324092	A5SS	0.33	50	50	ENSMUST00000066437.5	ENSMUSG00000045655.10	Fam216b	chr14	protein_coding	family with sequence similarity 216, member B
chr14	78322618	78324186	-	78322618	78324092	A5SS	0.33	50	50	ENSMUST00000066437.5	ENSMUSG00000045655.10	Fam216b	chr14	protein_coding	family with sequence similarity 216, member B
chr14	78322618	78324010	-	78322618	78324186	A5SS	0.33	50	50	ENSMUST00000118785.3	ENSMUSG00000045655.10	Fam216b	chr14	protein_coding	family with sequence similarity 216, member B
chr14	78739676	78745165	-	78739676;78740462	78740379;78745165	ES	0.5	50	50	ENSMUST00000123853.9	ENSMUSG00000022016.18	Akap11	chr14	protein_coding	A kinase (PRKA) anchor protein 11
chr14	78816248	78821815	-	78816248;78819011	78818919;78821815	ES	0.5	50	50	ENSMUST00000226342.3	ENSMUSG00000034731.12	Dgkh	chr14	protein_coding	diacylglycerol kinase, eta
chr14	78807597;78813452	78813327;78814889	-	78807597	78814889	cassetteExon	0.5	100	100	ENSMUST00000226342.3	ENSMUSG00000034731.12	Dgkh	chr14	protein_coding	diacylglycerol kinase, eta
chr14	78807597;78813457	78813327;78814889	-	78807597	78814889	cassetteExon	0.5	100	100	ENSMUST00000226342.3	ENSMUSG00000034731.12	Dgkh	chr14	protein_coding	diacylglycerol kinase, eta
chr14	78841990;78843840	78843806;78844341	-	78841990	78844341	cassetteExon	0.5	100	100	ENSMUST00000226342.3	ENSMUSG00000034731.12	Dgkh	chr14	protein_coding	diacylglycerol kinase, eta
chr14	78836186	78836448	-	78834202	78836448	A3SS	0.5	50	50	ENSMUST00000226342.3	ENSMUSG00000034731.12	Dgkh	chr14	protein_coding	diacylglycerol kinase, eta
chr14	78840573	78841743	-	78840573	78841717	A5SS	0.5	50	50	ENSMUST00000226342.3	ENSMUSG00000034731.12	Dgkh	chr14	protein_coding	diacylglycerol kinase, eta
chr14	78865605	78866668	-	78865605	78889121	A5SS	0.5	50	50	ENSMUST00000226342.3	ENSMUSG00000034731.12	Dgkh	chr14	protein_coding	diacylglycerol kinase, eta
chr14	78813452	78814889	-	78813457	78814889	A3SS	0.33	50	50	ENSMUST00000227537.2	ENSMUSG00000034731.12	Dgkh	chr14	protein_coding	diacylglycerol kinase, eta
chr14	79149719	79149829	+	79149719	79162702	A3SS	0.5	50	50	ENSMUST00000040990.7	ENSMUSG00000058997.9	Vwa8	chr14	protein_coding	von Willebrand factor A domain containing 8
chr14	79187017	79193952	+	79187017	79219676	A3SS	0.5	50	50	ENSMUST00000040990.7	ENSMUSG00000058997.9	Vwa8	chr14	protein_coding	von Willebrand factor A domain containing 8
chr14	79381657	79394512	+	79341136	79394512	A5SS	0.5	50	50	ENSMUST00000040990.7	ENSMUSG00000058997.9	Vwa8	chr14	protein_coding	von Willebrand factor A domain containing 8
chr14	79582548;79588270	79588129;79588813	-	79582548	79588813	cassetteExon	0.5	100	100	ENSMUST00000022597.15	ENSMUSG00000022020.16	Naa16	chr14	protein_coding	N(alpha)-acetyltransferase 16, NatA auxiliary subunit
chr14	79582548	79588813	-	79582548	79588129	5pMXE	0.5	50	50	ENSMUST00000227775.2	ENSMUSG00000022020.16	Naa16	chr14	protein_coding	N(alpha)-acetyltransferase 16, NatA auxiliary subunit
chr14	79622198	79624462	-	79619069	79624462	A3SS	0.5	50	50	ENSMUST00000169500.2	ENSMUSG00000022020.16	Naa16	chr14	protein_coding	N(alpha)-acetyltransferase 16, NatA auxiliary subunit
chr14	79619069	79620676	-	79619069	79624462	A5SS	0.5	50	50	ENSMUST00000169500.2	ENSMUSG00000022020.16	Naa16	chr14	protein_coding	N(alpha)-acetyltransferase 16, NatA auxiliary subunit
chr14	79699569;79701444	79701364;79703623	-	79699569	79703623	cassetteExon	0.5	100	100	ENSMUST00000022601.7	ENSMUSG00000022023.7	Wbp4	chr14	protein_coding	WW domain binding protein 4
chr14	79798367	79804590	+	79798367;79803012	79802902;79804590	ES	0.5	50	50	ENSMUST00000040131.13	ENSMUSG00000036461.17	Elf1	chr14	protein_coding	E74-like factor 1
chr14	79753210	79773563	+	79719077	79773563	A5SS	0.5	50	50	ENSMUST00000040131.13	ENSMUSG00000036461.17	Elf1	chr14	protein_coding	E74-like factor 1
chr14	79857239;79859651	79859544;79862281	+	79857239	79862281	cassetteExon	0.5	100	100	ENSMUST00000054908.10	ENSMUSG00000022024.11	Sugt1	chr14	protein_coding	SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
chr14	79875614	79879336	-	79875617	79879336	A3SS	0.33	50	50	ENSMUST00000165835.8	ENSMUSG00000022025.14	Cnmd	chr14	protein_coding	chondromodulin
chr14	79879048	79879336	-	79875617	79879336	A3SS	0.33	50	50	ENSMUST00000165835.8	ENSMUSG00000022025.14	Cnmd	chr14	protein_coding	chondromodulin
chr14	79879502	79882803	-	79879514	79882803	A3SS	0.5	50	50	ENSMUST00000165835.8	ENSMUSG00000022025.14	Cnmd	chr14	protein_coding	chondromodulin
chr14	79879048	79879336	-	79875614	79879336	A3SS	0.33	50	50	ENSMUST00000165204.2	ENSMUSG00000022025.14	Cnmd	chr14	protein_coding	chondromodulin
chr14	80005761	80006228	-	80005761	80005937	A5SS	0.5	50	50	ENSMUST00000039568.11	ENSMUSG00000036422.11	Pcdh8	chr14	protein_coding	protocadherin 8
chr14	80007641	80009837	+	80007783	80009837	A5SS	0.5	50	50	ENSMUST00000194881.2	ENSMUSG00000102774.2	Gm9748	chr14	lncRNA	predicted gene 9748
chr14	80170687	80212812	+	80170687	80193906	3pMXE	0.5	50	50	ENSMUST00000180427.2	ENSMUSG00000097927.3	Gm6999	chr14	lncRNA	predicted gene 6999
chr14	80128576	80170601	+	80126028	80170601	A5SS	0.5	50	50	ENSMUST00000180427.2	ENSMUSG00000097927.3	Gm6999	chr14	lncRNA	predicted gene 6999
chr14	80128576;80170687	80170601;80212812	+	80128576;80210420	80209283;80212812	MXE	0.5	100	100	ENSMUST00000232869.2	ENSMUSG00000097927.3	Gm6999	chr14	lncRNA	predicted gene 6999
chr14	80128576	80134335	+	80128576	80209283	A3SS	0.33	50	50	ENSMUST00000232869.2	ENSMUSG00000097927.3	Gm6999	chr14	lncRNA	predicted gene 6999
chr14	80212906	80213406	+	80212906	80243614	A3SS	0.33	50	50	ENSMUST00000232869.2	ENSMUSG00000097927.3	Gm6999	chr14	lncRNA	predicted gene 6999
chr14	80212906	80213512	+	80212906	80243614	A3SS	0.33	50	50	ENSMUST00000232869.2	ENSMUSG00000097927.3	Gm6999	chr14	lncRNA	predicted gene 6999
chr14	80221582	80243614	+	80212906	80243614	A5SS	0.33	50	50	ENSMUST00000232869.2	ENSMUSG00000097927.3	Gm6999	chr14	lncRNA	predicted gene 6999
chr14	80237944	80243614	+	80212906	80243614	A5SS	0.33	50	50	ENSMUST00000232869.2	ENSMUSG00000097927.3	Gm6999	chr14	lncRNA	predicted gene 6999
chr14	80128576	80134335	+	80128576	80170601	A3SS	0.33	50	50	ENSMUST00000233773.2	ENSMUSG00000097927.3	Gm6999	chr14	lncRNA	predicted gene 6999
chr14	80128576	80209283	+	80128576	80170601	A3SS&ES	0.33	50	50	ENSMUST00000233773.2	ENSMUSG00000097927.3	Gm6999	chr14	lncRNA	predicted gene 6999
chr14	80212906	80213406	+	80212906	80213512	A3SS	0.33	50	50	ENSMUST00000233773.2	ENSMUSG00000097927.3	Gm6999	chr14	lncRNA	predicted gene 6999
chr14	80210420	80212812	+	80170687	80212812	A5SS	0.5	50	50	ENSMUST00000233773.2	ENSMUSG00000097927.3	Gm6999	chr14	lncRNA	predicted gene 6999
chr14	80251787	80252050	+	80251787	80258559	A3SS	0.5	50	50	ENSMUST00000226541.2	ENSMUSG00000022026.8	Olfm4	chr14	protein_coding	olfactomedin 4
chr14	80237944	80243614	+	80221582	80243614	A5SS	0.33	50	50	ENSMUST00000226541.2	ENSMUSG00000022026.8	Olfm4	chr14	protein_coding	olfactomedin 4
chr14	80255663	80258559	+	80251787	80258559	A5SS	0.5	50	50	ENSMUST00000226541.2	ENSMUSG00000022026.8	Olfm4	chr14	protein_coding	olfactomedin 4
chr14	84702774;84703435	84703338;84708108	-	84702774	84708108	cassetteExon	0.5	100	100	ENSMUST00000228857.2	ENSMUSG00000115529.2	9630013A20Rik	chr14	lncRNA	RIKEN cDNA 9630013A20 gene
chr14	84709682	84713329	-	84709780	84713329	A3SS	0.33	50	50	ENSMUST00000228857.2	ENSMUSG00000115529.2	9630013A20Rik	chr14	lncRNA	RIKEN cDNA 9630013A20 gene
chr14	84709730	84713329	-	84709780	84713329	A3SS	0.33	50	50	ENSMUST00000228857.2	ENSMUSG00000115529.2	9630013A20Rik	chr14	lncRNA	RIKEN cDNA 9630013A20 gene
chr14	84710144	84713449	-	84709682	84713449	A3SS	0.5	50	50	ENSMUST00000228125.2	ENSMUSG00000115529.2	9630013A20Rik	chr14	lncRNA	RIKEN cDNA 9630013A20 gene
chr14	84709682	84713329	-	84709682	84713449	A5SS	0.5	50	50	ENSMUST00000228125.2	ENSMUSG00000115529.2	9630013A20Rik	chr14	lncRNA	RIKEN cDNA 9630013A20 gene
chr14	84709682	84713329	-	84709730	84713329	A3SS	0.33	50	50	ENSMUST00000226704.2	ENSMUSG00000115529.2	9630013A20Rik	chr14	lncRNA	RIKEN cDNA 9630013A20 gene
chr14	86498937	86510270	+	86498937	86499400	3pMXE	0.5	50	50	ENSMUST00000227144.2	ENSMUSG00000115271.2	4930529K09Rik	chr14	lncRNA	RIKEN cDNA 4930529K09 gene
chr14	86483533	86496317	+	86483533	86496211	A3SS	0.5	50	50	ENSMUST00000227144.2	ENSMUSG00000115271.2	4930529K09Rik	chr14	lncRNA	RIKEN cDNA 4930529K09 gene
chr14	86641422	86642118	-	86634038	86642118	A3SS	0.5	50	50	ENSMUST00000228199.2	ENSMUSG00000115664.2	Gm32913	chr14	lncRNA	predicted gene, 32913
chr14	87328590	87378434	-	87328590;87352482	87352450;87378434	ES	0.5	50	50	ENSMUST00000168889.3	ENSMUSG00000022021.15	Diaph3	chr14	protein_coding	diaphanous related formin 3
chr14	87313376	87328414	-	87310822	87328414	A3SS	0.5	50	50	ENSMUST00000168889.3	ENSMUSG00000022021.15	Diaph3	chr14	protein_coding	diaphanous related formin 3
chr14	86894018	86901112	-	86894018	87009522	A5SS	0.33	50	50	ENSMUST00000168889.3	ENSMUSG00000022021.15	Diaph3	chr14	protein_coding	diaphanous related formin 3
chr14	86894018	86986254	-	86894018	87009522	A5SS	0.33	50	50	ENSMUST00000168889.3	ENSMUSG00000022021.15	Diaph3	chr14	protein_coding	diaphanous related formin 3
chr14	87010138	87027215	-	87010138	87047772	A5SS	0.5	50	50	ENSMUST00000168889.3	ENSMUSG00000022021.15	Diaph3	chr14	protein_coding	diaphanous related formin 3
chr14	86902367	86986254	-	86894018	86986254	A3SS	0.5	50	50	ENSMUST00000226254.2	ENSMUSG00000022021.15	Diaph3	chr14	protein_coding	diaphanous related formin 3
chr14	86894018	86901112	-	86894018	86986254	A5SS	0.33	50	50	ENSMUST00000226254.2	ENSMUSG00000022021.15	Diaph3	chr14	protein_coding	diaphanous related formin 3
chr14	87694554;87695552	87695499;87696193	+	87694554	87696193	cassetteExon	0.5	100	100	ENSMUST00000169504.8	ENSMUSG00000022019.17	Tdrd3	chr14	protein_coding	tudor domain containing 3
chr14	87654284	87694439	+	87654284	87694470	A3SS	0.5	50	50	ENSMUST00000169504.8	ENSMUSG00000022019.17	Tdrd3	chr14	protein_coding	tudor domain containing 3
chr14	87709378	87709512	+	87696258	87709512	A5SS	0.5	50	50	ENSMUST00000169504.8	ENSMUSG00000022019.17	Tdrd3	chr14	protein_coding	tudor domain containing 3
chr14	88520707	88520877	-	88502295	88520877	A3SS	0.5	50	50	ENSMUST00000227521.2	ENSMUSG00000115479.2	Gm33203	chr14	lncRNA	predicted gene, 33203
chr14	93564316	94123133	-	93564316;93798013	93797912;94123133	ES	0.33	50	50	ENSMUST00000195826.6	ENSMUSG00000055421.9	Pcdh9	chr14	protein_coding	protocadherin 9
chr14	93411288	93564115	-	93253321	93564115	A3SS	0.5	50	50	ENSMUST00000195826.6	ENSMUSG00000055421.9	Pcdh9	chr14	protein_coding	protocadherin 9
chr14	93564190	93797912	-	93564316	93797912	A3SS	0.5	50	50	ENSMUST00000195826.6	ENSMUSG00000055421.9	Pcdh9	chr14	protein_coding	protocadherin 9
chr14	93564190	94123133	-	93798013	94123133	A3SS&ES	0.33	50	50	ENSMUST00000195826.6	ENSMUSG00000055421.9	Pcdh9	chr14	protein_coding	protocadherin 9
chr14	94125797	94127557	-	94126324	94127557	A3SS	0.5	50	50	ENSMUST00000195826.6	ENSMUSG00000055421.9	Pcdh9	chr14	protein_coding	protocadherin 9
chr14	94126324	94127878	-	94126324	94127557	A5SS	0.5	50	50	ENSMUST00000195826.6	ENSMUSG00000055421.9	Pcdh9	chr14	protein_coding	protocadherin 9
chr14	93564190	94123133	-	93564316	94123133	A3SS	0.33	50	50	ENSMUST00000193901.6	ENSMUSG00000055421.9	Pcdh9	chr14	protein_coding	protocadherin 9
chr14	93564190;93798013	93797912;94123133	-	93564190	94123133	cassetteExon	0.5	100	100	ENSMUST00000192221.6	ENSMUSG00000055421.9	Pcdh9	chr14	protein_coding	protocadherin 9
chr14	93564316	94123133	-	93798013	94123133	A3SS&ES	0.33	50	50	ENSMUST00000195376.6	ENSMUSG00000055421.9	Pcdh9	chr14	protein_coding	protocadherin 9
chr14	96118762	96119117	+	96118704	96119117	A5SS	0.5	50	50	ENSMUST00000228913.2	ENSMUSG00000034689.3	Spertl	chr14	protein_coding	spermatid associated like
chr14	98153405	98207243	-	98153405;98153984	98153829;98207243	ES	0.5	50	50	ENSMUST00000071533.13	ENSMUSG00000055639.17	Dach1	chr14	protein_coding	dachshund family transcription factor 1
chr14	99273946	99283430	-	99273946;99278096	99277951;99283430	ES	0.5	50	50	ENSMUST00000042662.10	ENSMUSG00000033186.10	Mzt1	chr14	protein_coding	mitotic spindle organizing protein 1
chr14	99278096	99283080	-	99278096	99283430	A5SS	0.33	50	50	ENSMUST00000042662.10	ENSMUSG00000033186.10	Mzt1	chr14	protein_coding	mitotic spindle organizing protein 1
chr14	99278096	99283449	-	99278096	99283430	A5SS	0.33	50	50	ENSMUST00000042662.10	ENSMUSG00000033186.10	Mzt1	chr14	protein_coding	mitotic spindle organizing protein 1
chr14	99273946	99283430	-	99273946	99277951	A5SS&ES	0.5	50	50	ENSMUST00000227948.2	ENSMUSG00000033186.10	Mzt1	chr14	protein_coding	mitotic spindle organizing protein 1
chr14	99278096	99283080	-	99278096	99283449	A5SS	0.33	50	50	ENSMUST00000227948.2	ENSMUSG00000033186.10	Mzt1	chr14	protein_coding	mitotic spindle organizing protein 1
chr14	99287535	99294175	+	99287535;99290999	99290954;99294175	ES	0.5	50	50	ENSMUST00000022656.8	ENSMUSG00000022070.8	Bora	chr14	protein_coding	bora, aurora kinase A activator
chr14	99299840	99301770	+	99299840	99305444	A3SS	0.5	50	50	ENSMUST00000022656.8	ENSMUSG00000022070.8	Bora	chr14	protein_coding	bora, aurora kinase A activator
chr14	99302977	99305444	+	99299840	99305444	A5SS	0.5	50	50	ENSMUST00000022656.8	ENSMUSG00000022070.8	Bora	chr14	protein_coding	bora, aurora kinase A activator
chr14	99299840	99305444	+	99299840;99302977	99301770;99305444	ES	0.5	50	50	ENSMUST00000227744.2	ENSMUSG00000022070.8	Bora	chr14	protein_coding	bora, aurora kinase A activator
chr14	99321590	99323483	-	99321590;99323394	99323310;99323483	ES	0.5	50	50	ENSMUST00000042471.11	ENSMUSG00000033166.12	Dis3	chr14	protein_coding	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease
chr14	99334266	99336119	-	99334266;99335214	99335021;99336119	ES	0.5	50	50	ENSMUST00000042471.11	ENSMUSG00000033166.12	Dis3	chr14	protein_coding	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease
chr14	99336276;99336622	99336555;99336882	-	99336276	99336882	cassetteExon	0.5	100	100	ENSMUST00000042471.11	ENSMUSG00000033166.12	Dis3	chr14	protein_coding	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease
chr14	99336622	99336739	-	99336622	99336882	A5SS	0.5	50	50	ENSMUST00000227022.2	ENSMUSG00000033166.12	Dis3	chr14	protein_coding	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease
chr14	99321590	99323483	-	99323394	99323483	3pMXE	0.5	50	50	ENSMUST00000228449.2	ENSMUSG00000033166.12	Dis3	chr14	protein_coding	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease
chr14	99334266	99336119	-	99335214	99336119	3pMXE	0.5	50	50	ENSMUST00000227001.2	ENSMUSG00000033166.12	Dis3	chr14	protein_coding	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease
chr14	99414008	99416751	+	99388177	99416751	A5SS	0.33	50	50	ENSMUST00000022650.9	ENSMUSG00000022064.11	Pibf1	chr14	protein_coding	progesterone immunomodulatory binding factor 1
chr14	99414120	99416751	+	99388177	99416751	A5SS	0.33	50	50	ENSMUST00000022650.9	ENSMUSG00000022064.11	Pibf1	chr14	protein_coding	progesterone immunomodulatory binding factor 1
chr14	99414120	99416751	+	99414008	99416751	A5SS	0.33	50	50	ENSMUST00000228288.2	ENSMUSG00000022064.11	Pibf1	chr14	protein_coding	progesterone immunomodulatory binding factor 1
chr14	100179532	100181034	-	100179532	100224867	A5SS	0.5	50	50	ENSMUST00000228216.2	ENSMUSG00000072294.6	Klf12	chr14	protein_coding	Kruppel-like factor 12
chr14	100387231	100521693	-	100387231	100521967	A5SS	0.5	50	50	ENSMUST00000228216.2	ENSMUSG00000072294.6	Klf12	chr14	protein_coding	Kruppel-like factor 12
chr14	100486604	100521693	-	100387231	100521693	A3SS	0.5	50	50	ENSMUST00000226774.2	ENSMUSG00000072294.6	Klf12	chr14	protein_coding	Kruppel-like factor 12
chr14	100450977	100482040	+	100450977	100470087	A3SS&ES	0.5	50	50	ENSMUST00000140320.9	ENSMUSG00000054391.13	4930517O19Rik	chr14	lncRNA	RIKEN cDNA 4930517O19 gene
chr14	101437420	101437502	-	101437420	101437491	A5SS	0.5	50	50	ENSMUST00000057718.11	ENSMUSG00000042888.11	Prr30	chr14	protein_coding	proline rich 30
chr14	101727058	101731782	-	101727058;101727380	101727289;101731782	ES	0.5	50	50	ENSMUST00000161991.8	ENSMUSG00000033083.17	Tbc1d4	chr14	protein_coding	TBC1 domain family, member 4
chr14	101696329;101698137	101698135;101700311	-	101696329	101700311	cassetteExon	0.5	100	100	ENSMUST00000161991.8	ENSMUSG00000033083.17	Tbc1d4	chr14	protein_coding	TBC1 domain family, member 4
chr14	101703200;101708887	101708864;101714416	-	101703200	101714416	cassetteExon	0.5	100	100	ENSMUST00000161991.8	ENSMUSG00000033083.17	Tbc1d4	chr14	protein_coding	TBC1 domain family, member 4
chr14	101712677	101714416	-	101703200	101714416	A3SS	0.33	50	50	ENSMUST00000161991.8	ENSMUSG00000033083.17	Tbc1d4	chr14	protein_coding	TBC1 domain family, member 4
chr14	101727055	101727289	-	101727058	101727289	A3SS	0.5	50	50	ENSMUST00000161991.8	ENSMUSG00000033083.17	Tbc1d4	chr14	protein_coding	TBC1 domain family, member 4
chr14	101708887	101714416	-	101708887;101712677	101712513;101714416	ES	0.33	50	50	ENSMUST00000162617.8	ENSMUSG00000033083.17	Tbc1d4	chr14	protein_coding	TBC1 domain family, member 4
chr14	101727058	101731782	-	101727380	101731782	A3SS&ES	0.5	50	50	ENSMUST00000159668.8	ENSMUSG00000033083.17	Tbc1d4	chr14	protein_coding	TBC1 domain family, member 4
chr14	101874542	101877825	-	101874542;101877735	101877724;101877825	ES	0.5	50	50	ENSMUST00000100339.9	ENSMUSG00000075486.11	Commd6	chr14	protein_coding	COMM domain containing 6
chr14	101874542	101877825	-	101877735	101877825	3pMXE	0.5	50	50	ENSMUST00000131022.2	ENSMUSG00000075486.11	Commd6	chr14	protein_coding	COMM domain containing 6
chr14	101891655	101903197	+	101891555	101903197	A5SS	0.5	50	50	ENSMUST00000227815.2	ENSMUSG00000022111.10	Uchl3	chr14	protein_coding	ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)
chr14	101906012;101923198	101923007;101928008	+	101906012	101928008	cassetteExon	0.5	100	100	ENSMUST00000002289.8	ENSMUSG00000022111.10	Uchl3	chr14	protein_coding	ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)
chr14	102166887	102170006	+	102166887;102168716	102168608;102170006	ES	0.5	50	50	ENSMUST00000100337.10	ENSMUSG00000033060.17	Lmo7	chr14	protein_coding	LIM domain only 7
chr14	102149596	102150595	+	102149596	102150676	A3SS	0.5	50	50	ENSMUST00000100337.10	ENSMUSG00000033060.17	Lmo7	chr14	protein_coding	LIM domain only 7
chr14	102066494	102078308	+	102044959	102078308	A5SS	0.2	50	50	ENSMUST00000100337.10	ENSMUSG00000033060.17	Lmo7	chr14	protein_coding	LIM domain only 7
chr14	102076166	102078308	+	102044959	102078308	A5SS	0.2	50	50	ENSMUST00000100337.10	ENSMUSG00000033060.17	Lmo7	chr14	protein_coding	LIM domain only 7
chr14	102077795	102078308	+	102044959	102078308	A5SS	0.2	50	50	ENSMUST00000100337.10	ENSMUSG00000033060.17	Lmo7	chr14	protein_coding	LIM domain only 7
chr14	102078026	102078308	+	102044959	102078308	A5SS	0.2	50	50	ENSMUST00000100337.10	ENSMUSG00000033060.17	Lmo7	chr14	protein_coding	LIM domain only 7
chr14	102106986	102112888	+	102078414	102112888	A5SS	0.5	50	50	ENSMUST00000100337.10	ENSMUSG00000033060.17	Lmo7	chr14	protein_coding	LIM domain only 7
chr14	102125327	102126113	+	102125092	102126113	A5SS	0.33	50	50	ENSMUST00000100337.10	ENSMUSG00000033060.17	Lmo7	chr14	protein_coding	LIM domain only 7
chr14	102076166	102078308	+	102066494	102078308	A5SS	0.2	50	50	ENSMUST00000159769.8	ENSMUSG00000033060.17	Lmo7	chr14	protein_coding	LIM domain only 7
chr14	102077795	102078308	+	102066494	102078308	A5SS	0.2	50	50	ENSMUST00000159769.8	ENSMUSG00000033060.17	Lmo7	chr14	protein_coding	LIM domain only 7
chr14	102078026	102078308	+	102066494	102078308	A5SS	0.2	50	50	ENSMUST00000159769.8	ENSMUSG00000033060.17	Lmo7	chr14	protein_coding	LIM domain only 7
chr14	102077795	102078308	+	102076166	102078308	A5SS	0.2	50	50	ENSMUST00000159258.8	ENSMUSG00000033060.17	Lmo7	chr14	protein_coding	LIM domain only 7
chr14	102078026	102078308	+	102076166	102078308	A5SS	0.2	50	50	ENSMUST00000159258.8	ENSMUSG00000033060.17	Lmo7	chr14	protein_coding	LIM domain only 7
chr14	102078026	102078308	+	102077795	102078308	A5SS	0.2	50	50	ENSMUST00000161668.8	ENSMUSG00000033060.17	Lmo7	chr14	protein_coding	LIM domain only 7
chr14	102121850;102126142	102126113;102133903	+	102121850	102133903	cassetteExon	0.5	100	100	ENSMUST00000159948.8	ENSMUSG00000033060.17	Lmo7	chr14	protein_coding	LIM domain only 7
chr14	102121850	102122727	+	102121850	102133903	A3SS	0.33	50	50	ENSMUST00000159948.8	ENSMUSG00000033060.17	Lmo7	chr14	protein_coding	LIM domain only 7
chr14	102121850	102122727	+	102121850	102126113	A3SS	0.33	50	50	ENSMUST00000160876.2	ENSMUSG00000033060.17	Lmo7	chr14	protein_coding	LIM domain only 7
chr14	102125092	102126113	+	102121850	102126113	A5SS	0.33	50	50	ENSMUST00000160876.2	ENSMUSG00000033060.17	Lmo7	chr14	protein_coding	LIM domain only 7
chr14	102125327	102126113	+	102121850	102126113	A5SS	0.33	50	50	ENSMUST00000160876.2	ENSMUSG00000033060.17	Lmo7	chr14	protein_coding	LIM domain only 7
chr14	103309235;103309551	103309434;103310623	+	103309235	103310623	cassetteExon	0.5	100	100	ENSMUST00000022721.8	ENSMUSG00000022125.8	Cln5	chr14	protein_coding	ceroid-lipofuscinosis, neuronal 5
chr14	103329862	103332773	-	103329862	103332629	A5SS	0.5	50	50	ENSMUST00000022720.15	ENSMUSG00000022124.16	Fbxl3	chr14	protein_coding	F-box and leucine-rich repeat protein 3
chr14	103332977	103336205	-	103332977	103336598	A5SS	0.33	50	50	ENSMUST00000022720.15	ENSMUSG00000022124.16	Fbxl3	chr14	protein_coding	F-box and leucine-rich repeat protein 3
chr14	103332977	103336792	-	103332977	103336598	A5SS	0.33	50	50	ENSMUST00000022720.15	ENSMUSG00000022124.16	Fbxl3	chr14	protein_coding	F-box and leucine-rich repeat protein 3
chr14	103332977	103336792	-	103332977	103336205	5pMXE	0.33	50	50	ENSMUST00000145693.8	ENSMUSG00000022124.16	Fbxl3	chr14	protein_coding	F-box and leucine-rich repeat protein 3
chr14	103332977	103336598	-	103326909	103336598	A3SS	0.5	50	50	ENSMUST00000226952.2	ENSMUSG00000022124.16	Fbxl3	chr14	protein_coding	F-box and leucine-rich repeat protein 3
chr14	103326909	103329740	-	103326909	103336598	A5SS	0.5	50	50	ENSMUST00000226952.2	ENSMUSG00000022124.16	Fbxl3	chr14	protein_coding	F-box and leucine-rich repeat protein 3
chr14	103351671	103352592	-	103351671	103354491	A5SS	0.5	50	50	ENSMUST00000161008.8	ENSMUSG00000033004.17	Mycbp2	chr14	protein_coding	MYC binding protein 2, E3 ubiquitin protein ligase
chr14	103374075	103376165	-	103374075	103376156	A5SS	0.5	50	50	ENSMUST00000161008.8	ENSMUSG00000033004.17	Mycbp2	chr14	protein_coding	MYC binding protein 2, E3 ubiquitin protein ligase
chr14	103500257	103513225	-	103500257;103506901	103506794;103513225	ES	0.5	50	50	ENSMUST00000160758.8	ENSMUSG00000033004.17	Mycbp2	chr14	protein_coding	MYC binding protein 2, E3 ubiquitin protein ligase
chr14	103506901	103513809	-	103506901;103513326	103513225;103513809	ES	0.5	50	50	ENSMUST00000160758.8	ENSMUSG00000033004.17	Mycbp2	chr14	protein_coding	MYC binding protein 2, E3 ubiquitin protein ligase
chr14	103394203;103407448	103407293;103410003	-	103394203	103410003	cassetteExon	0.5	100	100	ENSMUST00000160758.8	ENSMUSG00000033004.17	Mycbp2	chr14	protein_coding	MYC binding protein 2, E3 ubiquitin protein ligase
chr14	103412426;103414766	103414692;103419790	-	103412426	103419790	cassetteExon	0.5	100	100	ENSMUST00000160758.8	ENSMUSG00000033004.17	Mycbp2	chr14	protein_coding	MYC binding protein 2, E3 ubiquitin protein ligase
chr14	103500257;103501834	103501719;103506794	-	103500257	103506794	cassetteExon	0.5	100	100	ENSMUST00000160758.8	ENSMUSG00000033004.17	Mycbp2	chr14	protein_coding	MYC binding protein 2, E3 ubiquitin protein ligase
chr14	103500257;103513326	103513225;103513809	-	103500257;103506901	103501719;103513809	MXE	0.5	100	100	ENSMUST00000239305.2	ENSMUSG00000033004.17	Mycbp2	chr14	protein_coding	MYC binding protein 2, E3 ubiquitin protein ligase
chr14	103500257	103501719	-	103500257	103513225	A5SS	0.33	50	50	ENSMUST00000226961.2	ENSMUSG00000033004.17	Mycbp2	chr14	protein_coding	MYC binding protein 2, E3 ubiquitin protein ligase
chr14	103676234	103677751	+	103662677	103677751	A5SS	0.5	50	50	ENSMUST00000228080.2	ENSMUSG00000115099.2	1700087I21Rik	chr14	lncRNA	RIKEN cDNA 1700087I21 gene
chr14	103701557	103704046	+	103701557	103741350	A3SS	0.33	50	50	ENSMUST00000227693.2	ENSMUSG00000115762.2	Gm34907	chr14	lncRNA	predicted gene, 34907
chr14	103701557	103708275	+	103701557	103741350	A3SS	0.33	50	50	ENSMUST00000227693.2	ENSMUSG00000115762.2	Gm34907	chr14	lncRNA	predicted gene, 34907
chr14	103701557	103704046	+	103701557	103708275	A3SS	0.5	50	50	ENSMUST00000228400.2	ENSMUSG00000115762.2	Gm34907	chr14	lncRNA	predicted gene, 34907
chr14	103815327;103819287	103819228;103820514	+	103815327	103820514	cassetteExon	0.5	100	100	ENSMUST00000227322.2	ENSMUSG00000022123.10	Scel	chr14	protein_coding	sciellin
chr14	103894508;103921819	103921670;103923105	+	103894508	103923105	cassetteExon	0.5	100	100	ENSMUST00000069443.14	ENSMUSG00000055717.14	Slain1	chr14	protein_coding	SLAIN motif family, member 1
chr14	103893262	103894369	+	103888344	103894369	A5SS	0.5	50	50	ENSMUST00000069443.14	ENSMUSG00000055717.14	Slain1	chr14	protein_coding	SLAIN motif family, member 1
chr14	103902148	103923105	+	103894508	103923105	A5SS	0.33	50	50	ENSMUST00000069443.14	ENSMUSG00000055717.14	Slain1	chr14	protein_coding	SLAIN motif family, member 1
chr14	103902148	103923105	+	103921819	103923105	A5SS&ES	0.33	50	50	ENSMUST00000160805.8	ENSMUSG00000055717.14	Slain1	chr14	protein_coding	SLAIN motif family, member 1
chr14	104219056	104235552	-	104219056	104264363	A5SS	0.5	50	50	ENSMUST00000228770.2	ENSMUSG00000115727.2	4930432J09Rik	chr14	lncRNA	RIKEN cDNA 4930432J09 gene
chr14	104686581	104696655	-	104537366	104696655	A3SS	0.33	50	50	ENSMUST00000228095.2	ENSMUSG00000115424.2	D130079A08Rik	chr14	lncRNA	RIKEN cDNA D130079A08 gene
chr14	104686585	104696655	-	104537366	104696655	A3SS	0.33	50	50	ENSMUST00000228095.2	ENSMUSG00000115424.2	D130079A08Rik	chr14	lncRNA	RIKEN cDNA D130079A08 gene
chr14	104686585	104696655	-	104686581	104696655	A3SS	0.5	50	50	ENSMUST00000227158.2	ENSMUSG00000115424.2	D130079A08Rik	chr14	lncRNA	RIKEN cDNA D130079A08 gene
chr14	104701980	104702575	-	104701980	104703121	A5SS	0.5	50	50	ENSMUST00000053016.10	ENSMUSG00000048349.10	Pou4f1	chr14	protein_coding	POU domain, class 4, transcription factor 1
chr14	104747873;104759474	104759434;104759977	-	104747873	104759977	cassetteExon	0.5	100	100	ENSMUST00000022716.4	ENSMUSG00000022120.5	Obi1	chr14	protein_coding	ORC ubiquitin ligase 1
chr14	104740450	104740783	-	104717733	104740783	A3SS	0.5	50	50	ENSMUST00000022716.4	ENSMUSG00000022120.5	Obi1	chr14	protein_coding	ORC ubiquitin ligase 1
chr14	105122740	105151642	+	105122740;105123102	105122973;105151642	ES	0.5	50	50	ENSMUST00000227935.2	ENSMUSG00000115432.2	D130009I18Rik	chr14	lncRNA	RIKEN cDNA D130009I18 gene
chr14	104876834	104967519	+	104876834	105122656	A3SS	0.33	50	50	ENSMUST00000227935.2	ENSMUSG00000115432.2	D130009I18Rik	chr14	lncRNA	RIKEN cDNA D130009I18 gene
chr14	104876834	104967535	+	104876834	105122656	A3SS	0.33	50	50	ENSMUST00000227935.2	ENSMUSG00000115432.2	D130009I18Rik	chr14	lncRNA	RIKEN cDNA D130009I18 gene
chr14	104968266	105122656	+	104876834	105122656	A5SS	0.5	50	50	ENSMUST00000227935.2	ENSMUSG00000115432.2	D130009I18Rik	chr14	lncRNA	RIKEN cDNA D130009I18 gene
chr14	104876834	104967519	+	104876834	104967535	A3SS	0.5	50	50	ENSMUST00000228435.2	ENSMUSG00000115432.2	D130009I18Rik	chr14	lncRNA	RIKEN cDNA D130009I18 gene
chr14	104876834	105122656	+	104876834;104968266	104967535;105122656	ES	0.5	50	50	ENSMUST00000228477.2	ENSMUSG00000115432.2	D130009I18Rik	chr14	lncRNA	RIKEN cDNA D130009I18 gene
chr14	105122740	105173523	+	105122740	105151642	3pMXE	0.33	50	50	ENSMUST00000228477.2	ENSMUSG00000115432.2	D130009I18Rik	chr14	lncRNA	RIKEN cDNA D130009I18 gene
chr14	104968266	105047719	+	104968266	105122656	A3SS	0.5	50	50	ENSMUST00000228477.2	ENSMUSG00000115432.2	D130009I18Rik	chr14	lncRNA	RIKEN cDNA D130009I18 gene
chr14	104876834	105122656	+	104876834;104968266	104967519;105122656	ES	0.5	50	50	ENSMUST00000228036.2	ENSMUSG00000115432.2	D130009I18Rik	chr14	lncRNA	RIKEN cDNA D130009I18 gene
chr14	105122740	105122973	+	105122740	105173523	A3SS	0.33	50	50	ENSMUST00000228036.2	ENSMUSG00000115432.2	D130009I18Rik	chr14	lncRNA	RIKEN cDNA D130009I18 gene
chr14	105352722	105354422	-	105347238	105354422	A3SS	0.5	50	50	ENSMUST00000172122.8	ENSMUSG00000022119.16	Rbm26	chr14	protein_coding	RNA binding motif protein 26
chr14	105347238	105349755	-	105347238	105354422	A5SS	0.33	50	50	ENSMUST00000172122.8	ENSMUSG00000022119.16	Rbm26	chr14	protein_coding	RNA binding motif protein 26
chr14	105347238	105350905	-	105347238	105354422	A5SS	0.33	50	50	ENSMUST00000172122.8	ENSMUSG00000022119.16	Rbm26	chr14	protein_coding	RNA binding motif protein 26
chr14	105369443	105377752	-	105369443;105376598	105376527;105377752	ES	0.5	50	50	ENSMUST00000163545.8	ENSMUSG00000022119.16	Rbm26	chr14	protein_coding	RNA binding motif protein 26
chr14	105377883	105378632	-	105377874	105378632	A3SS	0.5	50	50	ENSMUST00000163545.8	ENSMUSG00000022119.16	Rbm26	chr14	protein_coding	RNA binding motif protein 26
chr14	105387829	105388185	-	105387844	105388185	A3SS	0.5	50	50	ENSMUST00000163545.8	ENSMUSG00000022119.16	Rbm26	chr14	protein_coding	RNA binding motif protein 26
chr14	105347238	105350905	-	105347238;105349838	105349755;105350905	ES	0.5	50	50	ENSMUST00000165350.8	ENSMUSG00000091509.8	Gm17066	chr14	lncRNA	predicted gene 17066
chr14	105542270	105545550	+	105542270	105545320	A3SS	0.5	50	50	ENSMUST00000181969.8	ENSMUSG00000053253.17	Ndfip2	chr14	protein_coding	Nedd4 family interacting protein 2
chr14	105532124	105532233	+	105529799	105532233	A5SS	0.5	50	50	ENSMUST00000181969.8	ENSMUSG00000053253.17	Ndfip2	chr14	protein_coding	Nedd4 family interacting protein 2
chr14	105742059	105742660	+	105736515	105742660	A5SS	0.5	50	50	ENSMUST00000022711.8	ENSMUSG00000022116.8	4930449E01Rik	chr14	lncRNA	RIKEN cDNA 4930449E01 gene
chr14	105831209	105869199	+	105831209	105831838	3pMXE	0.5	50	50	ENSMUST00000228796.2	ENSMUSG00000115149.2	9330188P03Rik	chr14	lncRNA	RIKEN cDNA 9330188P03 gene
chr14	105827107;105830406	105830126;105831015	+	105827107	105831015	cassetteExon	0.5	100	100	ENSMUST00000228796.2	ENSMUSG00000115149.2	9330188P03Rik	chr14	lncRNA	RIKEN cDNA 9330188P03 gene
chr14	105827107;105830554	105830126;105831015	+	105827107	105831015	cassetteExon	0.5	100	100	ENSMUST00000228796.2	ENSMUSG00000115149.2	9330188P03Rik	chr14	lncRNA	RIKEN cDNA 9330188P03 gene
chr14	105827107	105828582	+	105827107	105831015	A3SS	0.33	50	50	ENSMUST00000228796.2	ENSMUSG00000115149.2	9330188P03Rik	chr14	lncRNA	RIKEN cDNA 9330188P03 gene
chr14	105830733	105831015	+	105827107	105831015	A5SS	0.25	50	50	ENSMUST00000228796.2	ENSMUSG00000115149.2	9330188P03Rik	chr14	lncRNA	RIKEN cDNA 9330188P03 gene
chr14	105827107	105831015	+	105827107;105830733	105828582;105831015	ES	0.25	50	50	ENSMUST00000228670.2	ENSMUSG00000115149.2	9330188P03Rik	chr14	lncRNA	RIKEN cDNA 9330188P03 gene
chr14	105827107	105830126	+	105827107	105828582	A3SS	0.33	50	50	ENSMUST00000228670.2	ENSMUSG00000115149.2	9330188P03Rik	chr14	lncRNA	RIKEN cDNA 9330188P03 gene
chr14	105830406	105831015	+	105830733	105831015	A5SS	0.25	50	50	ENSMUST00000228670.2	ENSMUSG00000115149.2	9330188P03Rik	chr14	lncRNA	RIKEN cDNA 9330188P03 gene
chr14	105830554	105831015	+	105830733	105831015	A5SS	0.25	50	50	ENSMUST00000228670.2	ENSMUSG00000115149.2	9330188P03Rik	chr14	lncRNA	RIKEN cDNA 9330188P03 gene
chr14	105830406	105831015	+	105830554	105831015	A5SS	0.25	50	50	ENSMUST00000227476.2	ENSMUSG00000115149.2	9330188P03Rik	chr14	lncRNA	RIKEN cDNA 9330188P03 gene
chr14	105827107	105831015	+	105827107;105830733	105830126;105831015	ES	0.25	50	50	ENSMUST00000228136.2	ENSMUSG00000115149.2	9330188P03Rik	chr14	lncRNA	RIKEN cDNA 9330188P03 gene
chr14	105827107	105831015	+	105830554	105831015	5pMXE	0.25	50	50	ENSMUST00000227651.2	ENSMUSG00000115149.2	9330188P03Rik	chr14	lncRNA	RIKEN cDNA 9330188P03 gene
chr14	105860758	105861870	-	105860758;105861201	105861130;105861870	ES	0.5	50	50	ENSMUST00000211251.2	ENSMUSG00000110080.2	Gm6145	chr14	lncRNA	predicted gene 6145
chr14	105864927	105868107	-	105864927;105866015	105865948;105868107	ES	0.5	50	50	ENSMUST00000211251.2	ENSMUSG00000110080.2	Gm6145	chr14	lncRNA	predicted gene 6145
chr14	105861997;105862155	105862109;105864812	-	105861997	105864812	cassetteExon	0.5	100	100	ENSMUST00000211251.2	ENSMUSG00000110080.2	Gm6145	chr14	lncRNA	predicted gene 6145
chr14	105860758;105864040	105863741;105864812	-	105860758;105861997	105861130;105864812	MXE	0.5	100	100	ENSMUST00000211251.2	ENSMUSG00000110080.2	Gm6145	chr14	lncRNA	predicted gene 6145
chr14	105861997;105864040	105863741;105864812	-	105861997	105864812	cassetteExon	0.5	100	100	ENSMUST00000211251.2	ENSMUSG00000110080.2	Gm6145	chr14	lncRNA	predicted gene 6145
chr14	105864927	105867922	-	105864927	105865948	A5SS&ES	0.33	50	50	ENSMUST00000211251.2	ENSMUSG00000110080.2	Gm6145	chr14	lncRNA	predicted gene 6145
chr14	105866015	105867922	-	105866015	105868107	A5SS	0.5	50	50	ENSMUST00000211251.2	ENSMUSG00000110080.2	Gm6145	chr14	lncRNA	predicted gene 6145
chr14	105868248	105879187	-	105868248	105881088	A5SS	0.33	50	50	ENSMUST00000211251.2	ENSMUSG00000110080.2	Gm6145	chr14	lncRNA	predicted gene 6145
chr14	105868248	105880822	-	105868248	105881088	A5SS	0.33	50	50	ENSMUST00000211251.2	ENSMUSG00000110080.2	Gm6145	chr14	lncRNA	predicted gene 6145
chr14	105861997	105864812	-	105861997	105863741	5pMXE	0.33	50	50	ENSMUST00000209522.2	ENSMUSG00000110080.2	Gm6145	chr14	lncRNA	predicted gene 6145
chr14	105861997	105862109	-	105861997	105863741	A5SS	0.33	50	50	ENSMUST00000209522.2	ENSMUSG00000110080.2	Gm6145	chr14	lncRNA	predicted gene 6145
chr14	105868248	105880822	-	105868248	105879187	5pMXE	0.33	50	50	ENSMUST00000211114.2	ENSMUSG00000110080.2	Gm6145	chr14	lncRNA	predicted gene 6145
chr14	105860758;105864040	105863741;105864812	-	105860758;105862155	105861870;105864812	MXE	0.5	100	100	ENSMUST00000211114.2	ENSMUSG00000110080.2	Gm6145	chr14	lncRNA	predicted gene 6145
chr14	105861997;105864040	105863741;105864812	-	105861997;105862155	105862109;105864812	MXE	0.5	100	100	ENSMUST00000211114.2	ENSMUSG00000110080.2	Gm6145	chr14	lncRNA	predicted gene 6145
chr14	105864927;105866015	105865948;105867922	-	105864927	105867922	cassetteExon	0.5	100	100	ENSMUST00000211114.2	ENSMUSG00000110080.2	Gm6145	chr14	lncRNA	predicted gene 6145
chr14	105864927	105868107	-	105864927	105867922	A5SS	0.33	50	50	ENSMUST00000211114.2	ENSMUSG00000110080.2	Gm6145	chr14	lncRNA	predicted gene 6145
chr14	105860758;105861997	105861870;105863741	-	105860758	105863741	cassetteExon	0.5	100	100	ENSMUST00000210902.2	ENSMUSG00000110080.2	Gm6145	chr14	lncRNA	predicted gene 6145
chr14	105860758;105861997	105861870;105864812	-	105860758;105864040	105863741;105864812	MXE	0.5	100	100	ENSMUST00000210902.2	ENSMUSG00000110080.2	Gm6145	chr14	lncRNA	predicted gene 6145
chr14	105860758	105861130	-	105860758	105863741	A5SS	0.33	50	50	ENSMUST00000210902.2	ENSMUSG00000110080.2	Gm6145	chr14	lncRNA	predicted gene 6145
chr14	105864927	105868107	-	105864927	105865948	A5SS&ES	0.33	50	50	ENSMUST00000210902.2	ENSMUSG00000110080.2	Gm6145	chr14	lncRNA	predicted gene 6145
chr14	105860758	105861870	-	105861201	105861870	3pMXE	0.5	50	50	ENSMUST00000210292.2	ENSMUSG00000110080.2	Gm6145	chr14	lncRNA	predicted gene 6145
chr14	111913712	111916370	+	111913155	111916370	A5SS	0.5	50	50	ENSMUST00000042767.9	ENSMUSG00000033214.11	Slitrk5	chr14	protein_coding	SLIT and NTRK-like family, member 5
chr14	115178369;115182901	115182835;115183256	-	115178369	115183256	cassetteExon	0.5	100	100	ENSMUST00000227125.2	ENSMUSG00000115372.2	1700100I10Rik	chr14	lncRNA	RIKEN cDNA 1700100I10 gene
chr14	115178369	115182309	-	115178369	115183256	A5SS	0.25	50	50	ENSMUST00000227125.2	ENSMUSG00000115372.2	1700100I10Rik	chr14	lncRNA	RIKEN cDNA 1700100I10 gene
chr14	115178369	115182925	-	115178369	115183256	A5SS	0.25	50	50	ENSMUST00000227125.2	ENSMUSG00000115372.2	1700100I10Rik	chr14	lncRNA	RIKEN cDNA 1700100I10 gene
chr14	115178369	115182925	-	115178369	115182309	A5SS&ES	0.25	50	50	ENSMUST00000227763.2	ENSMUSG00000115372.2	1700100I10Rik	chr14	lncRNA	RIKEN cDNA 1700100I10 gene
chr14	115178369	115182835	-	115178369	115182925	A5SS	0.25	50	50	ENSMUST00000226612.2	ENSMUSG00000115372.2	1700100I10Rik	chr14	lncRNA	RIKEN cDNA 1700100I10 gene
chr14	115178369;115182584	115182309;115182835	-	115178369	115182835	cassetteExon	0.5	100	100	ENSMUST00000227825.2	ENSMUSG00000115372.2	1700100I10Rik	chr14	lncRNA	RIKEN cDNA 1700100I10 gene
chr14	115183540	115184816	+	115183540	115184813	A3SS	0.5	50	50	ENSMUST00000227840.2	ENSMUSG00000114979.2	Gm31072	chr14	lncRNA	predicted gene, 31072
chr14	115636691	115654555	+	115636691	115665551	A3SS	0.5	50	50	ENSMUST00000176912.8	ENSMUSG00000022112.15	Gpc5	chr14	protein_coding	glypican 5
chr14	118126077;118129783	118129754;118188550	+	118126077	118188550	cassetteExon	0.5	100	100	ENSMUST00000088483.10	ENSMUSG00000058571.12	Gpc6	chr14	protein_coding	glypican 6
chr14	118262410	118271650	-	118256205	118271650	A3SS	0.5	50	50	ENSMUST00000022725.4	ENSMUSG00000022129.5	Dct	chr14	protein_coding	dopachrome tautomerase
chr14	118359273;118364997	118364907;118365635	-	118359273	118365635	cassetteExon	0.5	100	100	ENSMUST00000227350.2	ENSMUSG00000022130.11	Tgds	chr14	protein_coding	TDP-glucose 4,6-dehydratase
chr14	118350471	118351725	-	118350569	118351725	A3SS	0.5	50	50	ENSMUST00000227350.2	ENSMUSG00000022130.11	Tgds	chr14	protein_coding	TDP-glucose 4,6-dehydratase
chr14	118449778	118450365	+	118449911	118450365	A5SS	0.5	50	50	ENSMUST00000227898.2	ENSMUSG00000115774.2	4933431J24Rik	chr14	lncRNA	RIKEN cDNA 4933431J24 gene
chr14	118474356	118491591	+	118474356	118474563	3pMXE	0.5	50	50	ENSMUST00000164755.2	ENSMUSG00000090534.2	Gm4675	chr14	lncRNA	predicted gene 4675
chr14	118491435	118491591	+	118474356	118491591	A5SS	0.5	50	50	ENSMUST00000163396.2	ENSMUSG00000090534.2	Gm4675	chr14	lncRNA	predicted gene 4675
chr14	118869599	118905759	-	118869599;118891786	118891562;118905759	ES	0.5	50	50	ENSMUST00000036554.14	ENSMUSG00000032849.15	Abcc4	chr14	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 4
chr14	118906519	118914178	-	118906519	118943448	A5SS	0.33	50	50	ENSMUST00000036554.14	ENSMUSG00000032849.15	Abcc4	chr14	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 4
chr14	118906519	118936861	-	118906519	118943448	A5SS	0.33	50	50	ENSMUST00000036554.14	ENSMUSG00000032849.15	Abcc4	chr14	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 4
chr14	118906519	118936861	-	118906519	118914178	5pMXE	0.33	50	50	ENSMUST00000226703.2	ENSMUSG00000032849.15	Abcc4	chr14	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 4
chr14	119099442	119111604	+	119099442;119111120	119111013;119111604	ES	0.5	50	50	ENSMUST00000047761.13	ENSMUSG00000022132.16	Cldn10	chr14	protein_coding	claudin 10
chr14	119092621	119099108	+	119025782	119099108	A5SS	0.5	50	50	ENSMUST00000047761.13	ENSMUSG00000022132.16	Cldn10	chr14	protein_coding	claudin 10
chr14	119149978;119150622	119150525;119152602	-	119149978	119152602	cassetteExon	0.5	100	100	ENSMUST00000047208.12	ENSMUSG00000042156.17	Dzip1	chr14	protein_coding	DAZ interacting protein 1
chr14	119118267	119118422	-	119116924	119118422	A3SS	0.5	50	50	ENSMUST00000047208.12	ENSMUSG00000042156.17	Dzip1	chr14	protein_coding	DAZ interacting protein 1
chr14	119146980	119148754	-	119146983	119148754	A3SS	0.5	50	50	ENSMUST00000047208.12	ENSMUSG00000042156.17	Dzip1	chr14	protein_coding	DAZ interacting protein 1
chr14	119116924	119117281	-	119116924	119118422	A5SS	0.5	50	50	ENSMUST00000047208.12	ENSMUSG00000042156.17	Dzip1	chr14	protein_coding	DAZ interacting protein 1
chr14	119152686	119153389	-	119152686	119159655	A5SS	0.5	50	50	ENSMUST00000047208.12	ENSMUSG00000042156.17	Dzip1	chr14	protein_coding	DAZ interacting protein 1
chr14	119160579;119161507	119161309;119161837	-	119160579	119161837	cassetteExon	0.5	100	100	ENSMUST00000004055.10	ENSMUSG00000042156.17	Dzip1	chr14	protein_coding	DAZ interacting protein 1
chr14	119116924	119118422	-	119116924;119118267	119117281;119118422	ES	0.5	50	50	ENSMUST00000228157.2	ENSMUSG00000042156.17	Dzip1	chr14	protein_coding	DAZ interacting protein 1
chr14	119149978	119152602	-	119149978	119150525	5pMXE	0.5	50	50	ENSMUST00000227344.2	ENSMUSG00000042156.17	Dzip1	chr14	protein_coding	DAZ interacting protein 1
chr14	119149978	119152602	-	119150622	119152602	3pMXE	0.5	50	50	ENSMUST00000228142.2	ENSMUSG00000042156.17	Dzip1	chr14	protein_coding	DAZ interacting protein 1
chr14	119235625	119240238	-	119235625;119239297	119239183;119240238	ES	0.33	50	50	ENSMUST00000148022.8	ENSMUSG00000042104.19	Uggt2	chr14	protein_coding	UDP-glucose glycoprotein glucosyltransferase 2
chr14	119239421	119240238	-	119239297	119240238	A3SS	0.33	50	50	ENSMUST00000148022.8	ENSMUSG00000042104.19	Uggt2	chr14	protein_coding	UDP-glucose glycoprotein glucosyltransferase 2
chr14	119240398	119243976	-	119240398	119244557	A5SS	0.5	50	50	ENSMUST00000148022.8	ENSMUSG00000042104.19	Uggt2	chr14	protein_coding	UDP-glucose glycoprotein glucosyltransferase 2
chr14	119245559	119250888	-	119245559;119246506	119246411;119250888	ES	0.5	50	50	ENSMUST00000156203.8	ENSMUSG00000042104.19	Uggt2	chr14	protein_coding	UDP-glucose glycoprotein glucosyltransferase 2
chr14	119269708;119270199	119270041;119272254	-	119269708	119272254	cassetteExon	0.5	100	100	ENSMUST00000156203.8	ENSMUSG00000042104.19	Uggt2	chr14	protein_coding	UDP-glucose glycoprotein glucosyltransferase 2
chr14	119257074	119263834	-	119257037	119263834	A3SS	0.5	50	50	ENSMUST00000156203.8	ENSMUSG00000042104.19	Uggt2	chr14	protein_coding	UDP-glucose glycoprotein glucosyltransferase 2
chr14	119235625;119240398	119240238;119244557	-	119235625	119244557	cassetteExon	0.5	100	100	ENSMUST00000126023.2	ENSMUSG00000042104.19	Uggt2	chr14	protein_coding	UDP-glucose glycoprotein glucosyltransferase 2
chr14	119235625	119239183	-	119235625	119244557	A5SS	0.33	50	50	ENSMUST00000126023.2	ENSMUSG00000042104.19	Uggt2	chr14	protein_coding	UDP-glucose glycoprotein glucosyltransferase 2
chr14	119245559	119250888	-	119245559	119246411	5pMXE	0.5	50	50	ENSMUST00000138720.9	ENSMUSG00000042104.19	Uggt2	chr14	protein_coding	UDP-glucose glycoprotein glucosyltransferase 2
chr14	119235625;119239421	119239183;119240238	-	119235625	119240238	cassetteExon	0.5	100	100	ENSMUST00000138720.9	ENSMUSG00000042104.19	Uggt2	chr14	protein_coding	UDP-glucose glycoprotein glucosyltransferase 2
chr14	119235625	119240238	-	119239297	119240238	3pMXE	0.33	50	50	ENSMUST00000148648.8	ENSMUSG00000042104.19	Uggt2	chr14	protein_coding	UDP-glucose glycoprotein glucosyltransferase 2
chr14	119235625	119240238	-	119239421	119240238	3pMXE	0.33	50	50	ENSMUST00000154130.2	ENSMUSG00000042104.19	Uggt2	chr14	protein_coding	UDP-glucose glycoprotein glucosyltransferase 2
chr14	119235625	119244557	-	119240398	119244557	3pMXE	0.5	50	50	ENSMUST00000173391.2	ENSMUSG00000042104.19	Uggt2	chr14	protein_coding	UDP-glucose glycoprotein glucosyltransferase 2
chr14	119269708	119272254	-	119270199	119272254	3pMXE	0.5	50	50	ENSMUST00000173470.2	ENSMUSG00000042104.19	Uggt2	chr14	protein_coding	UDP-glucose glycoprotein glucosyltransferase 2
chr14	120366060	120373396	-	120358926	120373396	A3SS	0.5	50	50	ENSMUST00000226227.2	ENSMUSG00000115146.2	Gm4681	chr14	lncRNA	predicted gene 4681
chr14	120626575	120633863	+	120626575;120633177	120633124;120633863	ES	0.5	50	50	ENSMUST00000088419.13	ENSMUSG00000022139.18	Mbnl2	chr14	protein_coding	muscleblind like splicing factor 2
chr14	120634016	120666347	+	120634016;120642144	120642050;120666347	ES	0.5	50	50	ENSMUST00000088419.13	ENSMUSG00000022139.18	Mbnl2	chr14	protein_coding	muscleblind like splicing factor 2
chr14	120634016;120640783	120640748;120642050	+	120634016	120642050	cassetteExon	0.5	100	100	ENSMUST00000088419.13	ENSMUSG00000022139.18	Mbnl2	chr14	protein_coding	muscleblind like splicing factor 2
chr14	120535151	120562206	+	120513317	120562206	A5SS	0.33	50	50	ENSMUST00000088419.13	ENSMUSG00000022139.18	Mbnl2	chr14	protein_coding	muscleblind like splicing factor 2
chr14	120543953	120562206	+	120513317	120562206	A5SS	0.33	50	50	ENSMUST00000088419.13	ENSMUSG00000022139.18	Mbnl2	chr14	protein_coding	muscleblind like splicing factor 2
chr14	120579894	120616562	+	120562824	120616562	A5SS	0.5	50	50	ENSMUST00000088419.13	ENSMUSG00000022139.18	Mbnl2	chr14	protein_coding	muscleblind like splicing factor 2
chr14	120543953	120562206	+	120535151	120562206	A5SS	0.33	50	50	ENSMUST00000226800.2	ENSMUSG00000022139.18	Mbnl2	chr14	protein_coding	muscleblind like splicing factor 2
chr14	120543953;120579894	120579753;120616562	+	120543953;120562824	120562206;120616562	MXE	0.5	100	100	ENSMUST00000227594.2	ENSMUSG00000022139.18	Mbnl2	chr14	protein_coding	muscleblind like splicing factor 2
chr14	120543953	120562206	+	120543953	120579753	A3SS	0.5	50	50	ENSMUST00000227644.2	ENSMUSG00000022139.18	Mbnl2	chr14	protein_coding	muscleblind like splicing factor 2
chr14	120634016	120640748	+	120634016	120666347	A3SS	0.33	50	50	ENSMUST00000227153.2	ENSMUSG00000022139.18	Mbnl2	chr14	protein_coding	muscleblind like splicing factor 2
chr14	121153581	121154768	+	121148755	121154768	A5SS	0.5	50	50	ENSMUST00000032898.9	ENSMUSG00000030662.11	Ipo5	chr14	protein_coding	importin 5
chr14	121444770	121460052	+	121444770;121456831	121456789;121460052	ES	0.5	50	50	ENSMUST00000135010.8	ENSMUSG00000025555.15	Farp1	chr14	protein_coding	FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)
chr14	121273337	121339401	+	121272750	121339401	A5SS	0.5	50	50	ENSMUST00000135010.8	ENSMUSG00000025555.15	Farp1	chr14	protein_coding	FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)
chr14	121575064	121617309	-	121575064	121616310	5pMXE	0.33	50	50	ENSMUST00000079817.8	ENSMUSG00000063410.9	Stk24	chr14	protein_coding	serine/threonine kinase 24
chr14	121540267	121540728	-	121540267	121545427	A5SS	0.5	50	50	ENSMUST00000079817.8	ENSMUSG00000063410.9	Stk24	chr14	protein_coding	serine/threonine kinase 24
chr14	121575064	121597236	-	121575064	121616310	A5SS	0.33	50	50	ENSMUST00000079817.8	ENSMUSG00000063410.9	Stk24	chr14	protein_coding	serine/threonine kinase 24
chr14	121575064	121617309	-	121575064	121597236	5pMXE	0.33	50	50	ENSMUST00000226161.2	ENSMUSG00000063410.9	Stk24	chr14	protein_coding	serine/threonine kinase 24
chr14	121751381	121754245	-	121747829	121754245	A3SS	0.5	50	50	ENSMUST00000227974.2	ENSMUSG00000115390.2	Gm49035	chr14	lncRNA	predicted gene, 49035
chr14	121781037	121783378	-	121781037;121781995	121781988;121783378	ES	0.5	50	50	ENSMUST00000212376.3	ENSMUSG00000025558.20	Dock9	chr14	protein_coding	dedicator of cytokinesis 9
chr14	121796545	121798002	-	121796545;121797812	121797807;121798002	ES	0.5	50	50	ENSMUST00000212376.3	ENSMUSG00000025558.20	Dock9	chr14	protein_coding	dedicator of cytokinesis 9
chr14	121918875	122034902	-	121918875	121975713	5pMXE	0.33	50	50	ENSMUST00000212376.3	ENSMUSG00000025558.20	Dock9	chr14	protein_coding	dedicator of cytokinesis 9
chr14	121796545;121797372	121797337;121797807	-	121796545	121797807	cassetteExon	0.5	100	100	ENSMUST00000212376.3	ENSMUSG00000025558.20	Dock9	chr14	protein_coding	dedicator of cytokinesis 9
chr14	121813431;121814836	121814759;121815567	-	121813431	121815567	cassetteExon	0.5	100	100	ENSMUST00000212376.3	ENSMUSG00000025558.20	Dock9	chr14	protein_coding	dedicator of cytokinesis 9
chr14	121823754;121828766	121828723;121831748	-	121823754;121829291	121829224;121831748	MXE	0.5	100	100	ENSMUST00000212376.3	ENSMUSG00000025558.20	Dock9	chr14	protein_coding	dedicator of cytokinesis 9
chr14	121829291;121829839	121829806;121831748	-	121829291	121831748	cassetteExon	0.5	100	100	ENSMUST00000212376.3	ENSMUSG00000025558.20	Dock9	chr14	protein_coding	dedicator of cytokinesis 9
chr14	121835165;121836271	121836119;121837100	-	121835165	121837100	cassetteExon	0.5	100	100	ENSMUST00000212376.3	ENSMUSG00000025558.20	Dock9	chr14	protein_coding	dedicator of cytokinesis 9
chr14	121829360	121831748	-	121829291	121831748	A3SS	0.25	50	50	ENSMUST00000212376.3	ENSMUSG00000025558.20	Dock9	chr14	protein_coding	dedicator of cytokinesis 9
chr14	121835168	121837100	-	121835165	121837100	A3SS	0.33	50	50	ENSMUST00000212376.3	ENSMUSG00000025558.20	Dock9	chr14	protein_coding	dedicator of cytokinesis 9
chr14	121918875	121935606	-	121918875	121975713	A5SS	0.33	50	50	ENSMUST00000212376.3	ENSMUSG00000025558.20	Dock9	chr14	protein_coding	dedicator of cytokinesis 9
chr14	121829291	121831748	-	121829291	121829806	5pMXE	0.5	50	50	ENSMUST00000211803.2	ENSMUSG00000025558.20	Dock9	chr14	protein_coding	dedicator of cytokinesis 9
chr14	121796545;121797812	121797337;121798002	-	121796545	121798002	cassetteExon	0.5	100	100	ENSMUST00000211803.2	ENSMUSG00000025558.20	Dock9	chr14	protein_coding	dedicator of cytokinesis 9
chr14	121829360	121829806	-	121829291	121829806	A3SS	0.5	50	50	ENSMUST00000211803.2	ENSMUSG00000025558.20	Dock9	chr14	protein_coding	dedicator of cytokinesis 9
chr14	121823754	121828723	-	121823754	121829224	A5SS	0.5	50	50	ENSMUST00000211803.2	ENSMUSG00000025558.20	Dock9	chr14	protein_coding	dedicator of cytokinesis 9
chr14	121918875	122034902	-	121918875	121935606	5pMXE	0.33	50	50	ENSMUST00000040700.9	ENSMUSG00000025558.20	Dock9	chr14	protein_coding	dedicator of cytokinesis 9
chr14	121823754;121828766	121828723;121831748	-	121823754;121829360	121829224;121831748	MXE	0.5	100	100	ENSMUST00000040700.9	ENSMUSG00000025558.20	Dock9	chr14	protein_coding	dedicator of cytokinesis 9
chr14	121829360;121829839	121829806;121831748	-	121829360	121831748	cassetteExon	0.5	100	100	ENSMUST00000040700.9	ENSMUSG00000025558.20	Dock9	chr14	protein_coding	dedicator of cytokinesis 9
chr14	121836271	121837100	-	121835168	121837100	A3SS	0.33	50	50	ENSMUST00000212181.2	ENSMUSG00000025558.20	Dock9	chr14	protein_coding	dedicator of cytokinesis 9
chr14	121823754;121828766	121828723;121831748	-	121823754;121829839	121829224;121831748	MXE	0.5	100	100	ENSMUST00000212416.2	ENSMUSG00000025558.20	Dock9	chr14	protein_coding	dedicator of cytokinesis 9
chr14	121829291	121831748	-	121829839	121831748	A3SS&ES	0.25	50	50	ENSMUST00000212416.2	ENSMUSG00000025558.20	Dock9	chr14	protein_coding	dedicator of cytokinesis 9
chr14	121829839	121831748	-	121828766	121831748	A3SS	0.25	50	50	ENSMUST00000100299.11	ENSMUSG00000025558.20	Dock9	chr14	protein_coding	dedicator of cytokinesis 9
chr14	121828766	121831748	-	121829291	121831748	3pMXE	0.25	50	50	ENSMUST00000211993.2	ENSMUSG00000025558.20	Dock9	chr14	protein_coding	dedicator of cytokinesis 9
chr14	122114423	122115702	-	122114423	122115536	5pMXE	0.33	50	50	ENSMUST00000187218.2	ENSMUSG00000102112.2	1810041H14Rik	chr14	lncRNA	RIKEN cDNA 1810041H14 gene
chr14	122114423	122116620	-	122114423	122115536	5pMXE	0.33	50	50	ENSMUST00000187218.2	ENSMUSG00000102112.2	1810041H14Rik	chr14	lncRNA	RIKEN cDNA 1810041H14 gene
chr14	122114423	122116620	-	122114423	122115702	5pMXE	0.33	50	50	ENSMUST00000187773.2	ENSMUSG00000102112.2	1810041H14Rik	chr14	lncRNA	RIKEN cDNA 1810041H14 gene
chr14	122116186	122144703	+	122116186;122142662	122142535;122144703	ES	0.5	50	50	ENSMUST00000039803.7	ENSMUSG00000041765.7	Ubac2	chr14	protein_coding	ubiquitin associated domain containing 2
chr14	122153742	122211021	+	122145732	122211021	A5SS	0.33	50	50	ENSMUST00000039803.7	ENSMUSG00000041765.7	Ubac2	chr14	protein_coding	ubiquitin associated domain containing 2
chr14	122183878	122211021	+	122145732	122211021	A5SS	0.33	50	50	ENSMUST00000039803.7	ENSMUSG00000041765.7	Ubac2	chr14	protein_coding	ubiquitin associated domain containing 2
chr14	122183878	122211021	+	122153742	122211021	A5SS	0.33	50	50	ENSMUST00000227684.2	ENSMUSG00000041765.7	Ubac2	chr14	protein_coding	ubiquitin associated domain containing 2
chr14	122192543;122198787	122198625;122202465	-	122192543	122202465	cassetteExon	0.5	100	100	ENSMUST00000049872.9	ENSMUSG00000051212.9	Gpr183	chr14	protein_coding	G protein-coupled receptor 183
chr14	122320245	122328532	-	122306025	122328532	A3SS	0.5	50	50	ENSMUST00000226452.2	ENSMUSG00000115121.2	Gm49236	chr14	lncRNA	predicted gene, 49236
chr14	122344847	122363518	+	122344847;122361195	122361128;122363518	ES	0.5	50	50	ENSMUST00000026624.11	ENSMUSG00000025544.14	Tm9sf2	chr14	protein_coding	transmembrane 9 superfamily member 2
chr14	122363611	122370692	+	122363611	122379776	A3SS	0.5	50	50	ENSMUST00000171318.2	ENSMUSG00000025544.14	Tm9sf2	chr14	protein_coding	transmembrane 9 superfamily member 2
chr14	122378722	122379776	+	122363611	122379776	A5SS	0.5	50	50	ENSMUST00000171318.2	ENSMUSG00000025544.14	Tm9sf2	chr14	protein_coding	transmembrane 9 superfamily member 2
chr14	122495665	122548656	+	122419193	122548656	A5SS	0.5	50	50	ENSMUST00000026625.7	ENSMUSG00000025545.11	Clybl	chr14	protein_coding	citrate lyase beta like
chr14	122697187	122697312	-	122697187	122701304	A5SS	0.5	50	50	ENSMUST00000039118.7	ENSMUSG00000041703.8	Zic5	chr14	protein_coding	zinc finger protein of the cerebellum 5
chr14	122710589	122711860	-	122710589	122710683	5pMXE	0.5	50	50	ENSMUST00000135485.8	ENSMUSG00000085555.10	2610035F20Rik	chr14	lncRNA	RIKEN cDNA 2610035F20 gene
chr14	122800399	122854166	+	122800399	122820029	3pMXE	0.5	50	50	ENSMUST00000148172.2	ENSMUSG00000041650.16	Pcca	chr14	protein_coding	propionyl-Coenzyme A carboxylase, alpha polypeptide
chr14	122795204;122800399	122800191;122820029	+	122795204	122820029	cassetteExon	0.5	100	100	ENSMUST00000154206.8	ENSMUSG00000041650.16	Pcca	chr14	protein_coding	propionyl-Coenzyme A carboxylase, alpha polypeptide
chr14	122795204;122800399	122800191;122854166	+	122795204;122822522	122820029;122854166	MXE	0.5	100	100	ENSMUST00000154206.8	ENSMUSG00000041650.16	Pcca	chr14	protein_coding	propionyl-Coenzyme A carboxylase, alpha polypeptide
chr14	122840439	122854166	+	122822522	122854166	A5SS	0.33	50	50	ENSMUST00000154206.8	ENSMUSG00000041650.16	Pcca	chr14	protein_coding	propionyl-Coenzyme A carboxylase, alpha polypeptide
chr14	122951537;122955031	122954901;122975314	+	122951537	122975314	cassetteExon	0.5	100	100	ENSMUST00000038374.13	ENSMUSG00000041650.16	Pcca	chr14	protein_coding	propionyl-Coenzyme A carboxylase, alpha polypeptide
chr14	123114316;123123707	123123325;123124459	+	123114316	123124459	cassetteExon	0.5	100	100	ENSMUST00000038374.13	ENSMUSG00000041650.16	Pcca	chr14	protein_coding	propionyl-Coenzyme A carboxylase, alpha polypeptide
chr14	123114316	123126970	+	123114316	123124459	A3SS&ES	0.33	50	50	ENSMUST00000038374.13	ENSMUSG00000041650.16	Pcca	chr14	protein_coding	propionyl-Coenzyme A carboxylase, alpha polypeptide
chr14	122951561	122975314	+	122951537	122975314	A5SS	0.33	50	50	ENSMUST00000038374.13	ENSMUSG00000041650.16	Pcca	chr14	protein_coding	propionyl-Coenzyme A carboxylase, alpha polypeptide
chr14	123113407	123114176	+	123050659	123114176	A5SS	0.5	50	50	ENSMUST00000038374.13	ENSMUSG00000041650.16	Pcca	chr14	protein_coding	propionyl-Coenzyme A carboxylase, alpha polypeptide
chr14	122795204	122820029	+	122795204	122800191	A3SS&ES	0.5	50	50	ENSMUST00000135578.8	ENSMUSG00000041650.16	Pcca	chr14	protein_coding	propionyl-Coenzyme A carboxylase, alpha polypeptide
chr14	122822522	122854166	+	122800399	122854166	A5SS	0.33	50	50	ENSMUST00000135578.8	ENSMUSG00000041650.16	Pcca	chr14	protein_coding	propionyl-Coenzyme A carboxylase, alpha polypeptide
chr14	122840439	122854166	+	122800399	122854166	A5SS	0.33	50	50	ENSMUST00000135578.8	ENSMUSG00000041650.16	Pcca	chr14	protein_coding	propionyl-Coenzyme A carboxylase, alpha polypeptide
chr14	122901760	122905933	+	122901760	123124459	A3SS	0.5	50	50	ENSMUST00000177312.8	ENSMUSG00000041650.16	Pcca	chr14	protein_coding	propionyl-Coenzyme A carboxylase, alpha polypeptide
chr14	123114316	123124459	+	122901760	123124459	A5SS	0.33	50	50	ENSMUST00000177312.8	ENSMUSG00000041650.16	Pcca	chr14	protein_coding	propionyl-Coenzyme A carboxylase, alpha polypeptide
chr14	123123707	123124459	+	122901760	123124459	A5SS	0.33	50	50	ENSMUST00000177312.8	ENSMUSG00000041650.16	Pcca	chr14	protein_coding	propionyl-Coenzyme A carboxylase, alpha polypeptide
chr14	122951561	122975314	+	122955031	122975314	A5SS&ES	0.33	50	50	ENSMUST00000147018.2	ENSMUSG00000041650.16	Pcca	chr14	protein_coding	propionyl-Coenzyme A carboxylase, alpha polypeptide
chr14	123114316	123126970	+	123114316	123123325	A3SS&ES	0.33	50	50	ENSMUST00000152383.8	ENSMUSG00000041650.16	Pcca	chr14	protein_coding	propionyl-Coenzyme A carboxylase, alpha polypeptide
chr14	123137944	123150880	-	123137944	123150513	5pMXE	0.33	50	50	ENSMUST00000110679.9	ENSMUSG00000041625.16	Ggact	chr14	protein_coding	gamma-glutamylamine cyclotransferase
chr14	123128493	123129021	-	123054035	123129021	A3SS	0.5	50	50	ENSMUST00000110679.9	ENSMUSG00000041625.16	Ggact	chr14	protein_coding	gamma-glutamylamine cyclotransferase
chr14	123137944	123150277	-	123137944	123150513	A5SS	0.33	50	50	ENSMUST00000110679.9	ENSMUSG00000041625.16	Ggact	chr14	protein_coding	gamma-glutamylamine cyclotransferase
chr14	123137944	123150277	-	123137944	123150880	A5SS	0.33	50	50	ENSMUST00000160401.8	ENSMUSG00000041625.16	Ggact	chr14	protein_coding	gamma-glutamylamine cyclotransferase
chr14	123150704	123169810	+	123150704	123163542	3pMXE	0.33	50	50	ENSMUST00000100291.3	ENSMUSG00000075463.4	4930594M22Rik	chr14	lncRNA	RIKEN cDNA 4930594M22 gene
chr14	123150704;123161089	123161034;123163542	+	123150704	123163542	cassetteExon	0.5	100	100	ENSMUST00000100291.3	ENSMUSG00000075463.4	4930594M22Rik	chr14	lncRNA	RIKEN cDNA 4930594M22 gene
chr14	123150704	123161034	+	123150704	123169810	A3SS	0.33	50	50	ENSMUST00000162218.2	ENSMUSG00000075463.4	4930594M22Rik	chr14	lncRNA	RIKEN cDNA 4930594M22 gene
chr14	123179398	123182086	-	123179398;123180769	123180567;123182086	ES	0.5	50	50	ENSMUST00000037726.14	ENSMUSG00000041594.19	Tmtc4	chr14	protein_coding	transmembrane and tetratricopeptide repeat containing 4
chr14	123215698	123220798	-	123215698	123220584	5pMXE	0.25	50	50	ENSMUST00000037726.14	ENSMUSG00000041594.19	Tmtc4	chr14	protein_coding	transmembrane and tetratricopeptide repeat containing 4
chr14	123170931	123178717	-	123170819	123178717	A3SS	0.5	50	50	ENSMUST00000037726.14	ENSMUSG00000041594.19	Tmtc4	chr14	protein_coding	transmembrane and tetratricopeptide repeat containing 4
chr14	123182272	123182920	-	123182250	123182920	A3SS	0.5	50	50	ENSMUST00000037726.14	ENSMUSG00000041594.19	Tmtc4	chr14	protein_coding	transmembrane and tetratricopeptide repeat containing 4
chr14	123188001	123209152	-	123200797	123209152	A3SS&ES	0.5	50	50	ENSMUST00000037726.14	ENSMUSG00000041594.19	Tmtc4	chr14	protein_coding	transmembrane and tetratricopeptide repeat containing 4
chr14	123170819	123173256	-	123170819	123178717	A5SS	0.5	50	50	ENSMUST00000037726.14	ENSMUSG00000041594.19	Tmtc4	chr14	protein_coding	transmembrane and tetratricopeptide repeat containing 4
chr14	123210697	123215580	-	123210697	123215486	A5SS	0.5	50	50	ENSMUST00000037726.14	ENSMUSG00000041594.19	Tmtc4	chr14	protein_coding	transmembrane and tetratricopeptide repeat containing 4
chr14	123215698	123217283	-	123215698	123220584	A5SS	0.25	50	50	ENSMUST00000037726.14	ENSMUSG00000041594.19	Tmtc4	chr14	protein_coding	transmembrane and tetratricopeptide repeat containing 4
chr14	123215698	123220351	-	123215698	123220584	A5SS	0.25	50	50	ENSMUST00000037726.14	ENSMUSG00000041594.19	Tmtc4	chr14	protein_coding	transmembrane and tetratricopeptide repeat containing 4
chr14	123215698	123220351	-	123215698;123217486	123217283;123220351	ES	0.5	50	50	ENSMUST00000126867.8	ENSMUSG00000041594.19	Tmtc4	chr14	protein_coding	transmembrane and tetratricopeptide repeat containing 4
chr14	123215698	123220798	-	123215698	123220351	5pMXE	0.25	50	50	ENSMUST00000148661.2	ENSMUSG00000041594.19	Tmtc4	chr14	protein_coding	transmembrane and tetratricopeptide repeat containing 4
chr14	123179398	123182086	-	123180769	123182086	3pMXE	0.5	50	50	ENSMUST00000227430.2	ENSMUSG00000041594.19	Tmtc4	chr14	protein_coding	transmembrane and tetratricopeptide repeat containing 4
chr14	123188001	123209152	-	123188001	123192043	5pMXE	0.5	50	50	ENSMUST00000227430.2	ENSMUSG00000041594.19	Tmtc4	chr14	protein_coding	transmembrane and tetratricopeptide repeat containing 4
chr14	123215698	123217283	-	123215698	123220798	A5SS	0.25	50	50	ENSMUST00000141478.2	ENSMUSG00000041594.19	Tmtc4	chr14	protein_coding	transmembrane and tetratricopeptide repeat containing 4
chr14	123412077	123491131	+	123280978	123491131	A5SS	0.5	50	50	ENSMUST00000228377.3	ENSMUSG00000115016.3	Gm33906	chr14	lncRNA	predicted gene, 33906
chr14	123412077	123491131	+	123412077	123412160	3pMXE	0.5	50	50	ENSMUST00000226639.2	ENSMUSG00000115016.3	Gm33906	chr14	lncRNA	predicted gene, 33906
chr14	123407177;123409612	123409454;123411939	+	123407177	123411939	cassetteExon	0.5	100	100	ENSMUST00000226639.2	ENSMUSG00000115016.3	Gm33906	chr14	lncRNA	predicted gene, 33906
chr14	123407177	123411939	+	123407177	123409454	3pMXE	0.5	50	50	ENSMUST00000226966.2	ENSMUSG00000115016.3	Gm33906	chr14	lncRNA	predicted gene, 33906
chr14	123551548	123554407	-	123551548;123553563	123553396;123554407	ES	0.5	50	50	ENSMUST00000000201.7	ENSMUSG00000000197.9	Nalcn	chr14	protein_coding	sodium leak channel, non-selective
chr14	123697840	123723798	-	123697840;123702243	123702076;123723798	ES	0.5	50	50	ENSMUST00000000201.7	ENSMUSG00000000197.9	Nalcn	chr14	protein_coding	sodium leak channel, non-selective
chr14	123753185;123828339	123828215;123830094	-	123753185;123809506	123809352;123830094	MXE	0.5	100	100	ENSMUST00000000201.7	ENSMUSG00000000197.9	Nalcn	chr14	protein_coding	sodium leak channel, non-selective
chr14	123537026	123537312	-	123536666	123537312	A3SS	0.5	50	50	ENSMUST00000000201.7	ENSMUSG00000000197.9	Nalcn	chr14	protein_coding	sodium leak channel, non-selective
chr14	123753185	123809387	-	123753185	123809352	A5SS	0.33	50	50	ENSMUST00000000201.7	ENSMUSG00000000197.9	Nalcn	chr14	protein_coding	sodium leak channel, non-selective
chr14	123753185;123828339	123828215;123830094	-	123753185;123809506	123809387;123830094	MXE	0.5	100	100	ENSMUST00000227818.2	ENSMUSG00000000197.9	Nalcn	chr14	protein_coding	sodium leak channel, non-selective
chr14	123828339	123830094	-	123809506	123830094	A3SS	0.5	50	50	ENSMUST00000228789.2	ENSMUSG00000000197.9	Nalcn	chr14	protein_coding	sodium leak channel, non-selective
chr14	124078097	124083851	+	124078097;124081349	124081209;124083851	ES	0.33	50	50	ENSMUST00000049681.14	ENSMUSG00000032925.17	Itgbl1	chr14	protein_coding	integrin, beta-like 1
chr14	124078097;124081149	124080986;124083851	+	124078097;124081349	124081209;124083851	MXE	0.5	100	100	ENSMUST00000049681.14	ENSMUSG00000032925.17	Itgbl1	chr14	protein_coding	integrin, beta-like 1
chr14	124078097	124083851	+	124078097;124081149	124080986;124083851	ES	0.33	50	50	ENSMUST00000142161.8	ENSMUSG00000032925.17	Itgbl1	chr14	protein_coding	integrin, beta-like 1
chr14	124078097;124081349	124080986;124083851	+	124078097	124083851	cassetteExon	0.5	100	100	ENSMUST00000132026.2	ENSMUSG00000032925.17	Itgbl1	chr14	protein_coding	integrin, beta-like 1
chr14	124373704	124429741	-	124373704	124913922	A5SS	0.5	50	50	ENSMUST00000095529.10	ENSMUSG00000025551.14	Fgf14	chr14	protein_coding	fibroblast growth factor 14
chr15	3300307	3304143	+	3298250	3304143	A5SS	0.16	50	50	ENSMUST00000160787.10	ENSMUSG00000064373.14	Selenop	chr15	protein_coding	selenoprotein P
chr15	3300434	3304143	+	3298250	3304143	A5SS	0.16	50	50	ENSMUST00000160787.10	ENSMUSG00000064373.14	Selenop	chr15	protein_coding	selenoprotein P
chr15	3300534	3304143	+	3298250	3304143	A5SS	0.16	50	50	ENSMUST00000160787.10	ENSMUSG00000064373.14	Selenop	chr15	protein_coding	selenoprotein P
chr15	3301649	3304143	+	3298250	3304143	A5SS	0.16	50	50	ENSMUST00000160787.10	ENSMUSG00000064373.14	Selenop	chr15	protein_coding	selenoprotein P
chr15	3302287	3304143	+	3298250	3304143	A5SS	0.16	50	50	ENSMUST00000160787.10	ENSMUSG00000064373.14	Selenop	chr15	protein_coding	selenoprotein P
chr15	3300434	3304143	+	3300307	3304143	A5SS	0.16	50	50	ENSMUST00000082424.12	ENSMUSG00000064373.14	Selenop	chr15	protein_coding	selenoprotein P
chr15	3300534	3304143	+	3300307	3304143	A5SS	0.16	50	50	ENSMUST00000082424.12	ENSMUSG00000064373.14	Selenop	chr15	protein_coding	selenoprotein P
chr15	3301649	3304143	+	3300307	3304143	A5SS	0.16	50	50	ENSMUST00000082424.12	ENSMUSG00000064373.14	Selenop	chr15	protein_coding	selenoprotein P
chr15	3302287	3304143	+	3300307	3304143	A5SS	0.16	50	50	ENSMUST00000082424.12	ENSMUSG00000064373.14	Selenop	chr15	protein_coding	selenoprotein P
chr15	3300534	3304143	+	3300434	3304143	A5SS	0.16	50	50	ENSMUST00000159158.9	ENSMUSG00000064373.14	Selenop	chr15	protein_coding	selenoprotein P
chr15	3301649	3304143	+	3300434	3304143	A5SS	0.16	50	50	ENSMUST00000159158.9	ENSMUSG00000064373.14	Selenop	chr15	protein_coding	selenoprotein P
chr15	3302287	3304143	+	3300434	3304143	A5SS	0.16	50	50	ENSMUST00000159158.9	ENSMUSG00000064373.14	Selenop	chr15	protein_coding	selenoprotein P
chr15	3300534;3302287	3302237;3304143	+	3300534	3304143	cassetteExon	0.5	100	100	ENSMUST00000159216.10	ENSMUSG00000064373.14	Selenop	chr15	protein_coding	selenoprotein P
chr15	3301649	3304143	+	3300534	3304143	A5SS	0.16	50	50	ENSMUST00000159216.10	ENSMUSG00000064373.14	Selenop	chr15	protein_coding	selenoprotein P
chr15	3301649	3304143	+	3302287	3304143	A5SS&ES	0.33	50	50	ENSMUST00000160311.3	ENSMUSG00000064373.14	Selenop	chr15	protein_coding	selenoprotein P
chr15	3321926	3323335	-	3312427	3323335	A3SS	0.5	50	50	ENSMUST00000228405.2	ENSMUSG00000091119.3	Ccdc152	chr15	protein_coding	coiled-coil domain containing 152
chr15	3312427	3319607	-	3312427	3323335	A5SS	0.5	50	50	ENSMUST00000228405.2	ENSMUSG00000091119.3	Ccdc152	chr15	protein_coding	coiled-coil domain containing 152
chr15	3418195	3612482	-	3418195;3487490	3487412;3612482	ES	0.33	50	50	ENSMUST00000069451.11	ENSMUSG00000055737.13	Ghr	chr15	protein_coding	growth hormone receptor
chr15	3418195;3475093	3475007;3487412	-	3418195	3487412	cassetteExon	0.5	100	100	ENSMUST00000069451.11	ENSMUSG00000055737.13	Ghr	chr15	protein_coding	growth hormone receptor
chr15	3357168	3357456	-	3355470	3357456	A3SS	0.5	50	50	ENSMUST00000069451.11	ENSMUSG00000055737.13	Ghr	chr15	protein_coding	growth hormone receptor
chr15	3415687	3418130	-	3377083	3418130	A3SS	0.5	50	50	ENSMUST00000069451.11	ENSMUSG00000055737.13	Ghr	chr15	protein_coding	growth hormone receptor
chr15	3581167	3612482	-	3487490	3612482	A3SS	0.33	50	50	ENSMUST00000069451.11	ENSMUSG00000055737.13	Ghr	chr15	protein_coding	growth hormone receptor
chr15	3487490	3500882	-	3487490	3612482	A5SS	0.25	50	50	ENSMUST00000069451.11	ENSMUSG00000055737.13	Ghr	chr15	protein_coding	growth hormone receptor
chr15	3487490	3611271	-	3487490	3612482	A5SS	0.25	50	50	ENSMUST00000069451.11	ENSMUSG00000055737.13	Ghr	chr15	protein_coding	growth hormone receptor
chr15	3487490	3611740	-	3487490	3612482	A5SS	0.25	50	50	ENSMUST00000069451.11	ENSMUSG00000055737.13	Ghr	chr15	protein_coding	growth hormone receptor
chr15	3487490	3611740	-	3487490	3611271	5pMXE	0.25	50	50	ENSMUST00000161561.8	ENSMUSG00000055737.13	Ghr	chr15	protein_coding	growth hormone receptor
chr15	3487490	3500882	-	3487490	3611271	A5SS	0.25	50	50	ENSMUST00000161561.8	ENSMUSG00000055737.13	Ghr	chr15	protein_coding	growth hormone receptor
chr15	3487490	3611740	-	3487490	3500882	5pMXE	0.25	50	50	ENSMUST00000110697.9	ENSMUSG00000055737.13	Ghr	chr15	protein_coding	growth hormone receptor
chr15	3581167	3612482	-	3418195	3612482	A3SS	0.33	50	50	ENSMUST00000160343.8	ENSMUSG00000055737.13	Ghr	chr15	protein_coding	growth hormone receptor
chr15	3418195	3475007	-	3418195	3612482	A5SS	0.33	50	50	ENSMUST00000160343.8	ENSMUSG00000055737.13	Ghr	chr15	protein_coding	growth hormone receptor
chr15	4001186	4002192	-	4001186	4005239	A5SS	0.5	50	50	ENSMUST00000022791.9	ENSMUSG00000022184.9	Fbxo4	chr15	protein_coding	F-box protein 4
chr15	4021346	4021438	-	4021346	4021840	A5SS	0.5	50	50	ENSMUST00000046633.10	ENSMUSG00000041935.11	AW549877	chr15	protein_coding	expressed sequence AW549877
chr15	4052826	4055501	-	4053083	4055501	A3SS	0.5	50	50	ENSMUST00000155191.2	ENSMUSG00000087221.4	BC037032	chr15	lncRNA	cDNA Sequence BC037032
chr15	4053083	4054142	-	4053083	4055501	A5SS	0.33	50	50	ENSMUST00000155191.2	ENSMUSG00000087221.4	BC037032	chr15	lncRNA	cDNA Sequence BC037032
chr15	4053083	4054877	-	4053083	4055501	A5SS	0.33	50	50	ENSMUST00000155191.2	ENSMUSG00000087221.4	BC037032	chr15	lncRNA	cDNA Sequence BC037032
chr15	4053083	4054877	-	4053083	4054142	A5SS	0.33	50	50	ENSMUST00000140003.2	ENSMUSG00000087221.4	BC037032	chr15	lncRNA	cDNA Sequence BC037032
chr15	4172354	4183210	+	4172354;4177148	4177047;4183210	ES	0.5	50	50	ENSMUST00000110690.9	ENSMUSG00000022186.15	Oxct1	chr15	protein_coding	3-oxoacid CoA transferase 1
chr15	4172354;4175358	4175283;4177047	+	4172354	4177047	cassetteExon	0.5	100	100	ENSMUST00000110690.9	ENSMUSG00000022186.15	Oxct1	chr15	protein_coding	3-oxoacid CoA transferase 1
chr15	4076794	4076947	+	4066663	4076947	A5SS	0.5	50	50	ENSMUST00000110690.9	ENSMUSG00000022186.15	Oxct1	chr15	protein_coding	3-oxoacid CoA transferase 1
chr15	4172048	4172274	+	4158405	4172274	A5SS	0.5	50	50	ENSMUST00000110690.9	ENSMUSG00000022186.15	Oxct1	chr15	protein_coding	3-oxoacid CoA transferase 1
chr15	4172354	4175283	+	4172354	4183210	A3SS	0.33	50	50	ENSMUST00000138927.2	ENSMUSG00000022186.15	Oxct1	chr15	protein_coding	3-oxoacid CoA transferase 1
chr15	4405297	4546101	+	4405297;4466784	4466694;4546101	ES	0.5	50	50	ENSMUST00000130332.2	ENSMUSG00000049148.9	Plcxd3	chr15	protein_coding	phosphatidylinositol-specific phospholipase C, X domain containing 3
chr15	4827922	4835514	+	4827922	4833105	3pMXE	0.5	50	50	ENSMUST00000162585.8	ENSMUSG00000022181.17	C6	chr15	protein_coding	complement component 6
chr15	4756799	4761107	+	4756799	4761122	A3SS	0.5	50	50	ENSMUST00000162585.8	ENSMUSG00000022181.17	C6	chr15	protein_coding	complement component 6
chr15	4795511	4811322	+	4793064	4811322	A5SS	0.5	50	50	ENSMUST00000162585.8	ENSMUSG00000022181.17	C6	chr15	protein_coding	complement component 6
chr15	4935169	4937984	+	4935169	4935513	3pMXE	0.5	50	50	ENSMUST00000226277.2	ENSMUSG00000022155.10	Mroh2b	chr15	protein_coding	maestro heat-like repeat family member 2B
chr15	4959613	4960498	+	4959739	4960498	A5SS&ES	0.5	50	50	ENSMUST00000045736.9	ENSMUSG00000022155.10	Mroh2b	chr15	protein_coding	maestro heat-like repeat family member 2B
chr15	5146408	5146769	+	5146166	5146769	A5SS	0.33	50	50	ENSMUST00000045356.9	ENSMUSG00000041841.9	Rpl37	chr15	protein_coding	ribosomal protein L37
chr15	5146548	5146769	+	5146166	5146769	A5SS	0.33	50	50	ENSMUST00000045356.9	ENSMUSG00000041841.9	Rpl37	chr15	protein_coding	ribosomal protein L37
chr15	5146548	5146769	+	5146408	5146769	A5SS	0.33	50	50	ENSMUST00000227463.2	ENSMUSG00000041841.9	Rpl37	chr15	protein_coding	ribosomal protein L37
chr15	5219284	5241480	+	5219284;5237931	5237850;5241480	ES	0.5	50	50	ENSMUST00000118193.8	ENSMUSG00000022151.17	Ttc33	chr15	protein_coding	tetratricopeptide repeat domain 33
chr15	5215249	5219063	+	5215053	5219063	A5SS	0.25	50	50	ENSMUST00000118193.8	ENSMUSG00000022151.17	Ttc33	chr15	protein_coding	tetratricopeptide repeat domain 33
chr15	5215874	5219063	+	5215053	5219063	A5SS	0.25	50	50	ENSMUST00000118193.8	ENSMUSG00000022151.17	Ttc33	chr15	protein_coding	tetratricopeptide repeat domain 33
chr15	5216894	5219063	+	5215053	5219063	A5SS	0.25	50	50	ENSMUST00000118193.8	ENSMUSG00000022151.17	Ttc33	chr15	protein_coding	tetratricopeptide repeat domain 33
chr15	5215874	5219063	+	5215249	5219063	A5SS	0.25	50	50	ENSMUST00000022751.15	ENSMUSG00000022151.17	Ttc33	chr15	protein_coding	tetratricopeptide repeat domain 33
chr15	5216894	5219063	+	5215249	5219063	A5SS	0.25	50	50	ENSMUST00000022751.15	ENSMUSG00000022151.17	Ttc33	chr15	protein_coding	tetratricopeptide repeat domain 33
chr15	5216894	5219063	+	5215874	5219063	A5SS	0.25	50	50	ENSMUST00000144653.8	ENSMUSG00000022151.17	Ttc33	chr15	protein_coding	tetratricopeptide repeat domain 33
chr15	5264703	5271742	-	5239682	5271742	A3SS	0.5	50	50	ENSMUST00000133966.2	ENSMUSG00000039942.16	Ptger4	chr15	protein_coding	prostaglandin E receptor 4 (subtype EP4)
chr15	5272676	5273164	-	5272676	5273101	A5SS	0.5	50	50	ENSMUST00000120563.2	ENSMUSG00000039942.16	Ptger4	chr15	protein_coding	prostaglandin E receptor 4 (subtype EP4)
chr15	5525836	5569106	+	5525836;5526201	5526022;5569106	ES	0.5	50	50	ENSMUST00000211750.2	ENSMUSG00000110018.3	5430437J10Rik	chr15	transcribed_processed_pseudogene	RIKEN cDNA 5430437J10 gene
chr15	5610749	5611780	+	5610749	5617167	A3SS	0.5	50	50	ENSMUST00000228069.2	ENSMUSG00000110018.3	5430437J10Rik	chr15	transcribed_processed_pseudogene	RIKEN cDNA 5430437J10 gene
chr15	5616518	5617167	+	5610749	5617167	A5SS	0.5	50	50	ENSMUST00000228069.2	ENSMUSG00000110018.3	5430437J10Rik	chr15	transcribed_processed_pseudogene	RIKEN cDNA 5430437J10 gene
chr15	6329380;6359200	6359039;6446287	+	6329380	6446287	cassetteExon	0.5	100	100	ENSMUST00000159552.2	ENSMUSG00000022150.17	Dab2	chr15	protein_coding	disabled 2, mitogen-responsive phosphoprotein
chr15	6416413	6446287	+	6329380	6446287	A5SS	0.2	50	50	ENSMUST00000159552.2	ENSMUSG00000022150.17	Dab2	chr15	protein_coding	disabled 2, mitogen-responsive phosphoprotein
chr15	6418645	6446287	+	6329380	6446287	A5SS	0.2	50	50	ENSMUST00000159552.2	ENSMUSG00000022150.17	Dab2	chr15	protein_coding	disabled 2, mitogen-responsive phosphoprotein
chr15	6419909	6446287	+	6329380	6446287	A5SS	0.2	50	50	ENSMUST00000159552.2	ENSMUSG00000022150.17	Dab2	chr15	protein_coding	disabled 2, mitogen-responsive phosphoprotein
chr15	6453731	6460435	+	6453731;6454178	6454116;6460435	ES	0.33	50	50	ENSMUST00000078019.13	ENSMUSG00000022150.17	Dab2	chr15	protein_coding	disabled 2, mitogen-responsive phosphoprotein
chr15	6453731	6458777	+	6453731	6454116	A3SS&ES	0.33	50	50	ENSMUST00000078019.13	ENSMUSG00000022150.17	Dab2	chr15	protein_coding	disabled 2, mitogen-responsive phosphoprotein
chr15	6454178	6456812	+	6454178	6460435	A3SS	0.25	50	50	ENSMUST00000078019.13	ENSMUSG00000022150.17	Dab2	chr15	protein_coding	disabled 2, mitogen-responsive phosphoprotein
chr15	6454178	6457002	+	6454178	6460435	A3SS	0.25	50	50	ENSMUST00000078019.13	ENSMUSG00000022150.17	Dab2	chr15	protein_coding	disabled 2, mitogen-responsive phosphoprotein
chr15	6454178	6458777	+	6454178	6460435	A3SS	0.25	50	50	ENSMUST00000078019.13	ENSMUSG00000022150.17	Dab2	chr15	protein_coding	disabled 2, mitogen-responsive phosphoprotein
chr15	6459430	6460435	+	6454178	6460435	A5SS	0.33	50	50	ENSMUST00000078019.13	ENSMUSG00000022150.17	Dab2	chr15	protein_coding	disabled 2, mitogen-responsive phosphoprotein
chr15	6416413	6446287	+	6359200	6446287	A5SS	0.2	50	50	ENSMUST00000159046.2	ENSMUSG00000022150.17	Dab2	chr15	protein_coding	disabled 2, mitogen-responsive phosphoprotein
chr15	6418645	6446287	+	6359200	6446287	A5SS	0.2	50	50	ENSMUST00000159046.2	ENSMUSG00000022150.17	Dab2	chr15	protein_coding	disabled 2, mitogen-responsive phosphoprotein
chr15	6419909	6446287	+	6359200	6446287	A5SS	0.2	50	50	ENSMUST00000159046.2	ENSMUSG00000022150.17	Dab2	chr15	protein_coding	disabled 2, mitogen-responsive phosphoprotein
chr15	6454178	6458777	+	6454178	6457002	3pMXE	0.25	50	50	ENSMUST00000161040.8	ENSMUSG00000022150.17	Dab2	chr15	protein_coding	disabled 2, mitogen-responsive phosphoprotein
chr15	6454178	6456812	+	6454178	6457002	A3SS	0.25	50	50	ENSMUST00000161040.8	ENSMUSG00000022150.17	Dab2	chr15	protein_coding	disabled 2, mitogen-responsive phosphoprotein
chr15	6453731	6458777	+	6453731;6454178	6454116;6458777	ES	0.5	50	50	ENSMUST00000080880.12	ENSMUSG00000022150.17	Dab2	chr15	protein_coding	disabled 2, mitogen-responsive phosphoprotein
chr15	6454178	6460435	+	6454178;6459430	6458777;6460435	ES	0.33	50	50	ENSMUST00000080880.12	ENSMUSG00000022150.17	Dab2	chr15	protein_coding	disabled 2, mitogen-responsive phosphoprotein
chr15	6454178	6456812	+	6454178	6458777	A3SS	0.25	50	50	ENSMUST00000080880.12	ENSMUSG00000022150.17	Dab2	chr15	protein_coding	disabled 2, mitogen-responsive phosphoprotein
chr15	6418645	6446287	+	6416413	6446287	A5SS	0.2	50	50	ENSMUST00000080880.12	ENSMUSG00000022150.17	Dab2	chr15	protein_coding	disabled 2, mitogen-responsive phosphoprotein
chr15	6419909	6446287	+	6416413	6446287	A5SS	0.2	50	50	ENSMUST00000080880.12	ENSMUSG00000022150.17	Dab2	chr15	protein_coding	disabled 2, mitogen-responsive phosphoprotein
chr15	6453731	6460435	+	6453731;6459430	6458777;6460435	ES	0.33	50	50	ENSMUST00000110664.9	ENSMUSG00000022150.17	Dab2	chr15	protein_coding	disabled 2, mitogen-responsive phosphoprotein
chr15	6453731;6454178	6454116;6460435	+	6453731;6459430	6458777;6460435	MXE	0.5	100	100	ENSMUST00000110664.9	ENSMUSG00000022150.17	Dab2	chr15	protein_coding	disabled 2, mitogen-responsive phosphoprotein
chr15	6453731	6458777	+	6453731	6460435	A3SS	0.33	50	50	ENSMUST00000161812.8	ENSMUSG00000022150.17	Dab2	chr15	protein_coding	disabled 2, mitogen-responsive phosphoprotein
chr15	6459430	6460435	+	6453731	6460435	A5SS	0.33	50	50	ENSMUST00000161812.8	ENSMUSG00000022150.17	Dab2	chr15	protein_coding	disabled 2, mitogen-responsive phosphoprotein
chr15	6419909	6446287	+	6418645	6446287	A5SS	0.2	50	50	ENSMUST00000159490.8	ENSMUSG00000022150.17	Dab2	chr15	protein_coding	disabled 2, mitogen-responsive phosphoprotein
chr15	6453731	6460435	+	6453731	6454116	3pMXE	0.33	50	50	ENSMUST00000161558.2	ENSMUSG00000022150.17	Dab2	chr15	protein_coding	disabled 2, mitogen-responsive phosphoprotein
chr15	6521020	6527913	+	6521020;6526660	6526432;6527913	ES	0.5	50	50	ENSMUST00000022749.17	ENSMUSG00000022149.19	C9	chr15	protein_coding	complement component 9
chr15	6474964;6483855	6483696;6487658	+	6474964	6487658	cassetteExon	0.5	100	100	ENSMUST00000022749.17	ENSMUSG00000022149.19	C9	chr15	protein_coding	complement component 9
chr15	6599144	6609402	+	6552394	6609402	A5SS	0.5	50	50	ENSMUST00000226412.2	ENSMUSG00000022148.17	Fyb	chr15	protein_coding	FYN binding protein
chr15	6673244	6676118	+	6673244;6674380	6674243;6676118	ES	0.5	50	50	ENSMUST00000090461.12	ENSMUSG00000022148.17	Fyb	chr15	protein_coding	FYN binding protein
chr15	6614659	6649075	+	6610527	6649075	A5SS	0.5	50	50	ENSMUST00000090461.12	ENSMUSG00000022148.17	Fyb	chr15	protein_coding	FYN binding protein
chr15	6684330	6688013	+	6682025	6688013	A5SS	0.5	50	50	ENSMUST00000090461.12	ENSMUSG00000022148.17	Fyb	chr15	protein_coding	FYN binding protein
chr15	6789138	6793771	+	6789138	6793761	A3SS	0.5	50	50	ENSMUST00000228918.2	ENSMUSG00000050310.10	Rictor	chr15	protein_coding	RPTOR independent companion of MTOR, complex 2
chr15	6854130	6856570	-	6854133	6856570	A3SS	0.5	50	50	ENSMUST00000022746.13	ENSMUSG00000022146.13	Osmr	chr15	protein_coding	oncostatin M receptor
chr15	7159307	7183868	+	7120229	7183868	A5SS	0.25	50	50	ENSMUST00000228723.2	ENSMUSG00000054263.13	Lifr	chr15	protein_coding	LIF receptor alpha
chr15	7160519	7183868	+	7120229	7183868	A5SS	0.25	50	50	ENSMUST00000228723.2	ENSMUSG00000054263.13	Lifr	chr15	protein_coding	LIF receptor alpha
chr15	7170064	7183868	+	7120229	7183868	A5SS	0.25	50	50	ENSMUST00000228723.2	ENSMUSG00000054263.13	Lifr	chr15	protein_coding	LIF receptor alpha
chr15	7159307;7160519	7160382;7183868	+	7159307	7183868	cassetteExon	0.5	100	100	ENSMUST00000067190.12	ENSMUSG00000054263.13	Lifr	chr15	protein_coding	LIF receptor alpha
chr15	7159307	7162096	+	7159307	7183868	A3SS	0.33	50	50	ENSMUST00000067190.12	ENSMUSG00000054263.13	Lifr	chr15	protein_coding	LIF receptor alpha
chr15	7214299	7214548	+	7214299	7215047	A3SS	0.5	50	50	ENSMUST00000067190.12	ENSMUSG00000054263.13	Lifr	chr15	protein_coding	LIF receptor alpha
chr15	7170064	7183868	+	7159307	7183868	A5SS	0.25	50	50	ENSMUST00000067190.12	ENSMUSG00000054263.13	Lifr	chr15	protein_coding	LIF receptor alpha
chr15	7159307	7160382	+	7159307	7162096	A3SS	0.33	50	50	ENSMUST00000226826.2	ENSMUSG00000054263.13	Lifr	chr15	protein_coding	LIF receptor alpha
chr15	7170064	7183868	+	7160519	7183868	A5SS	0.33	50	50	ENSMUST00000164529.9	ENSMUSG00000054263.13	Lifr	chr15	protein_coding	LIF receptor alpha
chr15	7252307;7254149	7254126;7261069	-	7252307	7261069	cassetteExon	0.5	100	100	ENSMUST00000058593.10	ENSMUSG00000042961.14	Egflam	chr15	protein_coding	EGF-like, fibronectin type III and laminin G domains
chr15	7319426	7333406	-	7319431	7333406	A3SS	0.5	50	50	ENSMUST00000058593.10	ENSMUSG00000042961.14	Egflam	chr15	protein_coding	EGF-like, fibronectin type III and laminin G domains
chr15	7347826	7427469	-	7347831	7427469	A3SS	0.5	50	50	ENSMUST00000058593.10	ENSMUSG00000042961.14	Egflam	chr15	protein_coding	EGF-like, fibronectin type III and laminin G domains
chr15	7284025	7284156	-	7284025	7319265	A5SS	0.5	50	50	ENSMUST00000058593.10	ENSMUSG00000042961.14	Egflam	chr15	protein_coding	EGF-like, fibronectin type III and laminin G domains
chr15	8122599	8123160	-	8112066	8123160	A3SS	0.5	50	50	ENSMUST00000045766.8	ENSMUSG00000039828.8	Wdr70	chr15	protein_coding	WD repeat domain 70
chr15	8172643;8173403	8173260;8173535	+	8172643	8173535	cassetteExon	0.5	100	100	ENSMUST00000163765.3	ENSMUSG00000022142.9	Nup155	chr15	protein_coding	nucleoporin 155
chr15	8252634;8254900	8254823;8256397	+	8252634	8256397	cassetteExon	0.5	100	100	ENSMUST00000110617.2	ENSMUSG00000039801.8	Cplane1	chr15	protein_coding	ciliogenesis and planar polarity effector 1
chr15	8559824	8561973	+	8541876	8561973	A5SS	0.5	50	50	ENSMUST00000227558.2	ENSMUSG00000115480.2	Gm49249	chr15	lncRNA	predicted gene, 49249
chr15	8717296	8717772	-	8680537	8717772	A3SS	0.5	50	50	ENSMUST00000005493.14	ENSMUSG00000005360.15	Slc1a3	chr15	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 3
chr15	8738323	8738768	-	8738323	8739823	A5SS	0.5	50	50	ENSMUST00000005493.14	ENSMUSG00000005360.15	Slc1a3	chr15	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 3
chr15	8715638	8717195	-	8710660	8717195	A3SS	0.5	50	50	ENSMUST00000153455.8	ENSMUSG00000005360.15	Slc1a3	chr15	protein_coding	solute carrier family 1 (glial high affinity glutamate transporter), member 3
chr15	8998000	9029611	+	8998000	8999703	3pMXE	0.5	50	50	ENSMUST00000229662.2	ENSMUSG00000048424.19	Ranbp3l	chr15	protein_coding	RAN binding protein 3-like
chr15	9030990	9031518	+	9030990	9031453	A3SS	0.5	50	50	ENSMUST00000228227.2	ENSMUSG00000048424.19	Ranbp3l	chr15	protein_coding	RAN binding protein 3-like
chr15	9085886	9092803	+	9085886;9091338	9091255;9092803	ES	0.33	50	50	ENSMUST00000190591.10	ENSMUSG00000022253.18	Nadk2	chr15	protein_coding	NAD kinase 2, mitochondrial
chr15	9096181	9100195	+	9096181;9098963	9098898;9100195	ES	0.5	50	50	ENSMUST00000190591.10	ENSMUSG00000022253.18	Nadk2	chr15	protein_coding	NAD kinase 2, mitochondrial
chr15	9100290	9103414	+	9100290;9103126	9103071;9103414	ES	0.5	50	50	ENSMUST00000190591.10	ENSMUSG00000022253.18	Nadk2	chr15	protein_coding	NAD kinase 2, mitochondrial
chr15	9106940	9108309	+	9106940	9108307	A3SS	0.5	50	50	ENSMUST00000190591.10	ENSMUSG00000022253.18	Nadk2	chr15	protein_coding	NAD kinase 2, mitochondrial
chr15	9075469	9083350	+	9071845	9083350	A5SS	0.5	50	50	ENSMUST00000190591.10	ENSMUSG00000022253.18	Nadk2	chr15	protein_coding	NAD kinase 2, mitochondrial
chr15	9084352	9085805	+	9084330	9085805	A5SS	0.5	50	50	ENSMUST00000190591.10	ENSMUSG00000022253.18	Nadk2	chr15	protein_coding	NAD kinase 2, mitochondrial
chr15	9092324	9092803	+	9091338	9092803	A5SS	0.33	50	50	ENSMUST00000190591.10	ENSMUSG00000022253.18	Nadk2	chr15	protein_coding	NAD kinase 2, mitochondrial
chr15	9094924	9096103	+	9092939	9096103	A5SS	0.5	50	50	ENSMUST00000190591.10	ENSMUSG00000022253.18	Nadk2	chr15	protein_coding	NAD kinase 2, mitochondrial
chr15	9092324	9092803	+	9085886	9092803	A5SS	0.33	50	50	ENSMUST00000189437.8	ENSMUSG00000022253.18	Nadk2	chr15	protein_coding	NAD kinase 2, mitochondrial
chr15	9085886	9092803	+	9085886	9091255	3pMXE	0.5	50	50	ENSMUST00000228397.3	ENSMUSG00000022253.18	Nadk2	chr15	protein_coding	NAD kinase 2, mitochondrial
chr15	9100290	9103414	+	9100290	9103071	3pMXE	0.5	50	50	ENSMUST00000227928.2	ENSMUSG00000022253.18	Nadk2	chr15	protein_coding	NAD kinase 2, mitochondrial
chr15	9139790	9155312	-	9139790	9140271	5pMXE	0.5	50	50	ENSMUST00000096482.10	ENSMUSG00000054115.13	Skp2	chr15	protein_coding	S-phase kinase-associated protein 2
chr15	9153111	9155312	-	9139790	9155312	A3SS	0.5	50	50	ENSMUST00000190131.2	ENSMUSG00000054115.13	Skp2	chr15	protein_coding	S-phase kinase-associated protein 2
chr15	9172327	9175346	+	9172327	9175211	A3SS	0.5	50	50	ENSMUST00000227556.3	ENSMUSG00000039704.9	Lmbrd2	chr15	protein_coding	LMBR1 domain containing 2
chr15	9155786	9156293	+	9151666	9156293	A5SS	0.5	50	50	ENSMUST00000227556.3	ENSMUSG00000039704.9	Lmbrd2	chr15	protein_coding	LMBR1 domain containing 2
chr15	9284259;9292176	9292062;9306161	+	9284259	9306161	cassetteExon	0.5	100	100	ENSMUST00000175695.9	ENSMUSG00000072664.12	Ugt3a1	chr15	protein_coding	UDP glycosyltransferases 3 family, polypeptide A1
chr15	9280133	9284161	+	9277044	9284161	A5SS	0.33	50	50	ENSMUST00000175695.9	ENSMUSG00000072664.12	Ugt3a1	chr15	protein_coding	UDP glycosyltransferases 3 family, polypeptide A1
chr15	9283787	9284161	+	9277044	9284161	A5SS	0.33	50	50	ENSMUST00000175695.9	ENSMUSG00000072664.12	Ugt3a1	chr15	protein_coding	UDP glycosyltransferases 3 family, polypeptide A1
chr15	9284101	9306161	+	9284259	9306161	A5SS&ES	0.33	50	50	ENSMUST00000175695.9	ENSMUSG00000072664.12	Ugt3a1	chr15	protein_coding	UDP glycosyltransferases 3 family, polypeptide A1
chr15	9280133;9284101	9283948;9306161	+	9280133;9292176	9284161;9306161	MXE	0.5	100	100	ENSMUST00000022861.9	ENSMUSG00000072664.12	Ugt3a1	chr15	protein_coding	UDP glycosyltransferases 3 family, polypeptide A1
chr15	9283787	9284161	+	9280133	9284161	A5SS	0.33	50	50	ENSMUST00000022861.9	ENSMUSG00000072664.12	Ugt3a1	chr15	protein_coding	UDP glycosyltransferases 3 family, polypeptide A1
chr15	9280133;9284101	9283948;9306161	+	9280133;9284259	9284161;9306161	MXE	0.5	100	100	ENSMUST00000176173.2	ENSMUSG00000072664.12	Ugt3a1	chr15	protein_coding	UDP glycosyltransferases 3 family, polypeptide A1
chr15	9292176	9306161	+	9284101	9306161	A5SS	0.33	50	50	ENSMUST00000145326.2	ENSMUSG00000072664.12	Ugt3a1	chr15	protein_coding	UDP glycosyltransferases 3 family, polypeptide A1
chr15	9284259	9306161	+	9284259	9292062	3pMXE	0.5	50	50	ENSMUST00000176878.2	ENSMUSG00000072664.12	Ugt3a1	chr15	protein_coding	UDP glycosyltransferases 3 family, polypeptide A1
chr15	9461920	9465841	+	9461920;9462886	9462677;9465841	ES	0.5	50	50	ENSMUST00000042360.5	ENSMUSG00000039676.5	Capsl	chr15	protein_coding	calcyphosine-like
chr15	9525278	9530127	-	9525278	9529747	5pMXE	0.5	50	50	ENSMUST00000228782.2	ENSMUSG00000003882.6	Il7r	chr15	protein_coding	interleukin 7 receptor
chr15	9508444	9508793	-	9508444	9508810	A5SS	0.5	50	50	ENSMUST00000228782.2	ENSMUSG00000003882.6	Il7r	chr15	protein_coding	interleukin 7 receptor
chr15	9725341;9727667	9727497;9729703	-	9725341	9729703	cassetteExon	0.5	100	100	ENSMUST00000160236.8	ENSMUSG00000072663.13	Spef2	chr15	protein_coding	sperm flagellar 2
chr15	9602101	9607259	-	9597495	9607259	A3SS	0.5	50	50	ENSMUST00000160236.8	ENSMUSG00000072663.13	Spef2	chr15	protein_coding	sperm flagellar 2
chr15	10326631	10341860	+	10326631	10328367	3pMXE	0.2	50	50	ENSMUST00000005400.13	ENSMUSG00000005268.21	Prlr	chr15	protein_coding	prolactin receptor
chr15	10326631	10345744	+	10326631	10328367	3pMXE	0.2	50	50	ENSMUST00000005400.13	ENSMUSG00000005268.21	Prlr	chr15	protein_coding	prolactin receptor
chr15	10326631	10346496	+	10326631	10328367	3pMXE	0.2	50	50	ENSMUST00000005400.13	ENSMUSG00000005268.21	Prlr	chr15	protein_coding	prolactin receptor
chr15	10326631	10371685	+	10326631	10328367	3pMXE	0.2	50	50	ENSMUST00000005400.13	ENSMUSG00000005268.21	Prlr	chr15	protein_coding	prolactin receptor
chr15	10314359	10317594	+	10314359	10317589	A3SS	0.5	50	50	ENSMUST00000005400.13	ENSMUSG00000005268.21	Prlr	chr15	protein_coding	prolactin receptor
chr15	10213837	10293737	+	10177957	10293737	A5SS	0.2	50	50	ENSMUST00000005400.13	ENSMUSG00000005268.21	Prlr	chr15	protein_coding	prolactin receptor
chr15	10216209	10293737	+	10177957	10293737	A5SS	0.2	50	50	ENSMUST00000005400.13	ENSMUSG00000005268.21	Prlr	chr15	protein_coding	prolactin receptor
chr15	10224182	10293737	+	10177957	10293737	A5SS	0.2	50	50	ENSMUST00000005400.13	ENSMUSG00000005268.21	Prlr	chr15	protein_coding	prolactin receptor
chr15	10249735	10293737	+	10177957	10293737	A5SS	0.2	50	50	ENSMUST00000005400.13	ENSMUSG00000005268.21	Prlr	chr15	protein_coding	prolactin receptor
chr15	10326631	10346496	+	10326631;10342110	10341860;10346496	ES	0.33	50	50	ENSMUST00000145428.8	ENSMUSG00000005268.21	Prlr	chr15	protein_coding	prolactin receptor
chr15	10326631	10345744	+	10326631	10341860	A3SS&ES	0.25	50	50	ENSMUST00000145428.8	ENSMUSG00000005268.21	Prlr	chr15	protein_coding	prolactin receptor
chr15	10341967	10346496	+	10342110	10346496	A5SS	0.33	50	50	ENSMUST00000145428.8	ENSMUSG00000005268.21	Prlr	chr15	protein_coding	prolactin receptor
chr15	10326631	10346496	+	10326631;10341967	10341860;10346496	ES	0.33	50	50	ENSMUST00000137867.8	ENSMUSG00000005268.21	Prlr	chr15	protein_coding	prolactin receptor
chr15	10216209	10293737	+	10213837	10293737	A5SS	0.2	50	50	ENSMUST00000138135.8	ENSMUSG00000005268.21	Prlr	chr15	protein_coding	prolactin receptor
chr15	10224182	10293737	+	10213837	10293737	A5SS	0.2	50	50	ENSMUST00000138135.8	ENSMUSG00000005268.21	Prlr	chr15	protein_coding	prolactin receptor
chr15	10249735	10293737	+	10213837	10293737	A5SS	0.2	50	50	ENSMUST00000138135.8	ENSMUSG00000005268.21	Prlr	chr15	protein_coding	prolactin receptor
chr15	10224182	10293737	+	10216209	10293737	A5SS	0.2	50	50	ENSMUST00000130720.8	ENSMUSG00000005268.21	Prlr	chr15	protein_coding	prolactin receptor
chr15	10249735	10293737	+	10216209	10293737	A5SS	0.2	50	50	ENSMUST00000130720.8	ENSMUSG00000005268.21	Prlr	chr15	protein_coding	prolactin receptor
chr15	10326631	10346496	+	10326631	10341860	3pMXE	0.2	50	50	ENSMUST00000128450.8	ENSMUSG00000005268.21	Prlr	chr15	protein_coding	prolactin receptor
chr15	10326631	10371685	+	10326631	10341860	3pMXE	0.2	50	50	ENSMUST00000128450.8	ENSMUSG00000005268.21	Prlr	chr15	protein_coding	prolactin receptor
chr15	10249735	10293737	+	10224182	10293737	A5SS	0.2	50	50	ENSMUST00000128450.8	ENSMUSG00000005268.21	Prlr	chr15	protein_coding	prolactin receptor
chr15	10326631	10346496	+	10326631	10345744	3pMXE	0.2	50	50	ENSMUST00000148257.8	ENSMUSG00000005268.21	Prlr	chr15	protein_coding	prolactin receptor
chr15	10326631	10371685	+	10326631	10345744	3pMXE	0.2	50	50	ENSMUST00000148257.8	ENSMUSG00000005268.21	Prlr	chr15	protein_coding	prolactin receptor
chr15	10326631	10371685	+	10326631	10346496	3pMXE	0.2	50	50	ENSMUST00000128921.8	ENSMUSG00000005268.21	Prlr	chr15	protein_coding	prolactin receptor
chr15	10358767	10371685	+	10326631	10371685	A5SS	0.5	50	50	ENSMUST00000157020.2	ENSMUSG00000094814.2	Gm21973	chr15	protein_coding	predicted gene 21973
chr15	10373954	10377461	+	10373954	10374082	3pMXE	0.5	50	50	ENSMUST00000110540.8	ENSMUSG00000089678.9	Agxt2	chr15	protein_coding	alanine-glyoxylate aminotransferase 2
chr15	10483492;10485502	10485437;10485821	-	10483492	10485821	cassetteExon	0.5	100	100	ENSMUST00000022855.12	ENSMUSG00000022247.13	Brix1	chr15	protein_coding	BRX1, biogenesis of ribosomes
chr15	10483492;10485502	10485441;10485821	-	10483492	10485821	cassetteExon	0.5	100	100	ENSMUST00000022855.12	ENSMUSG00000022247.13	Brix1	chr15	protein_coding	BRX1, biogenesis of ribosomes
chr15	10483492	10485821	-	10483492	10485437	5pMXE	0.33	50	50	ENSMUST00000168690.8	ENSMUSG00000022247.13	Brix1	chr15	protein_coding	BRX1, biogenesis of ribosomes
chr15	10483492	10485441	-	10483492	10485437	A5SS	0.33	50	50	ENSMUST00000168690.8	ENSMUSG00000022247.13	Brix1	chr15	protein_coding	BRX1, biogenesis of ribosomes
chr15	10483492	10485441	-	10483448	10485441	A3SS	0.5	50	50	ENSMUST00000169050.8	ENSMUSG00000022247.13	Brix1	chr15	protein_coding	BRX1, biogenesis of ribosomes
chr15	10483492	10485821	-	10485502	10485821	A3SS&ES	0.5	50	50	ENSMUST00000169050.8	ENSMUSG00000022247.13	Brix1	chr15	protein_coding	BRX1, biogenesis of ribosomes
chr15	10486802	10490342	+	10486802;10488184	10488076;10490342	ES	0.5	50	50	ENSMUST00000022856.15	ENSMUSG00000022248.15	Rad1	chr15	protein_coding	RAD1 checkpoint DNA exonuclease
chr15	10492949	10495992	+	10492949	10493240	3pMXE	0.5	50	50	ENSMUST00000022856.15	ENSMUSG00000022248.15	Rad1	chr15	protein_coding	RAD1 checkpoint DNA exonuclease
chr15	10490600	10492874	+	10490600	10492851	A3SS	0.5	50	50	ENSMUST00000022856.15	ENSMUSG00000022248.15	Rad1	chr15	protein_coding	RAD1 checkpoint DNA exonuclease
chr15	10551668;10557739	10557668;10558681	-	10551668	10558681	cassetteExon	0.5	100	100	ENSMUST00000167842.9	ENSMUSG00000022249.15	Ttc23l	chr15	protein_coding	tetratricopeptide repeat domain 23-like
chr15	10504659	10509400	-	10502277	10509400	A3SS	0.5	50	50	ENSMUST00000167842.9	ENSMUSG00000022249.15	Ttc23l	chr15	protein_coding	tetratricopeptide repeat domain 23-like
chr15	10588010	10591673	-	10588010;10589431	10589345;10591673	ES	0.5	50	50	ENSMUST00000090339.11	ENSMUSG00000022246.15	Rai14	chr15	protein_coding	retinoic acid induced 14
chr15	10690538	10714080	-	10690538	10713432	5pMXE	0.33	50	50	ENSMUST00000090339.11	ENSMUSG00000022246.15	Rai14	chr15	protein_coding	retinoic acid induced 14
chr15	10690538	10714609	-	10690538	10713432	5pMXE	0.33	50	50	ENSMUST00000090339.11	ENSMUSG00000022246.15	Rai14	chr15	protein_coding	retinoic acid induced 14
chr15	10690538	10714609	-	10690538	10714080	5pMXE	0.33	50	50	ENSMUST00000227506.2	ENSMUSG00000022246.15	Rai14	chr15	protein_coding	retinoic acid induced 14
chr15	10604232	10606714	+	10604232	10609639	A3SS	0.5	50	50	ENSMUST00000227861.2	ENSMUSG00000115667.2	Gm10389	chr15	lncRNA	predicted gene 10389
chr15	10715090	10716734	+	10715066	10716734	A5SS	0.5	50	50	ENSMUST00000180604.2	ENSMUSG00000096971.3	4930556M19Rik	chr15	lncRNA	RIKEN cDNA 4930556M19 gene
chr15	10716804	10767521	+	10716860	10767521	A5SS	0.5	50	50	ENSMUST00000180604.2	ENSMUSG00000096971.3	4930556M19Rik	chr15	lncRNA	RIKEN cDNA 4930556M19 gene
chr15	10716804	10718340	+	10716804	10767521	A3SS	0.33	50	50	ENSMUST00000226304.2	ENSMUSG00000096971.3	4930556M19Rik	chr15	lncRNA	RIKEN cDNA 4930556M19 gene
chr15	10716804	10719150	+	10716804	10767521	A3SS	0.33	50	50	ENSMUST00000226304.2	ENSMUSG00000096971.3	4930556M19Rik	chr15	lncRNA	RIKEN cDNA 4930556M19 gene
chr15	10716804	10719150	+	10716804	10718340	3pMXE	0.33	50	50	ENSMUST00000226989.2	ENSMUSG00000096971.3	4930556M19Rik	chr15	lncRNA	RIKEN cDNA 4930556M19 gene
chr15	10814936	10828918	+	10814936	10831341	A3SS	0.5	50	50	ENSMUST00000227059.2	ENSMUSG00000115151.2	Gm19276	chr15	lncRNA	predicted gene, 19276
chr15	10952842	10958043	+	10952623	10958043	A5SS	0.5	50	50	ENSMUST00000022853.15	ENSMUSG00000058914.13	C1qtnf3	chr15	protein_coding	C1q and tumor necrosis factor related protein 3
chr15	10983579	10984743	+	10983579	10984772	A3SS	0.5	50	50	ENSMUST00000070877.7	ENSMUSG00000022244.8	Amacr	chr15	protein_coding	alpha-methylacyl-CoA racemase
chr15	11071952	11215627	+	11071952	11152007	3pMXE	0.5	50	50	ENSMUST00000227189.2	ENSMUSG00000047497.11	Adamts12	chr15	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12
chr15	11071952	11215627	+	11071952;11152157	11152007;11215627	ES	0.5	50	50	ENSMUST00000061318.9	ENSMUSG00000047497.11	Adamts12	chr15	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12
chr15	11385284;11386093	11385979;11387138	-	11385284	11387138	cassetteExon	0.5	100	100	ENSMUST00000228814.2	ENSMUSG00000022241.7	Tars	chr15	protein_coding	threonyl-tRNA synthetase
chr15	11393366	11394310	-	11393362	11394310	A3SS	0.5	50	50	ENSMUST00000228814.2	ENSMUSG00000022241.7	Tars	chr15	protein_coding	threonyl-tRNA synthetase
chr15	11626640	11627139	-	11625346	11627139	A3SS	0.5	50	50	ENSMUST00000228516.2	ENSMUSG00000115076.2	Gm49106	chr15	lncRNA	predicted gene, 49106
chr15	11895890	11906700	-	11895890	11904972	5pMXE	0.5	50	50	ENSMUST00000066529.5	ENSMUSG00000022206.8	Npr3	chr15	protein_coding	natriuretic peptide receptor 3
chr15	11846468	11848555	-	11846471	11848555	A3SS	0.5	50	50	ENSMUST00000066529.5	ENSMUSG00000022206.8	Npr3	chr15	protein_coding	natriuretic peptide receptor 3
chr15	11883550	11890935	-	11883550	11895768	A5SS	0.5	50	50	ENSMUST00000066529.5	ENSMUSG00000022206.8	Npr3	chr15	protein_coding	natriuretic peptide receptor 3
chr15	11895890;11905268	11904972;11906700	-	11895890	11906700	cassetteExon	0.5	100	100	ENSMUST00000228489.2	ENSMUSG00000022206.8	Npr3	chr15	protein_coding	natriuretic peptide receptor 3
chr15	11895890	11906700	-	11905268	11906700	3pMXE	0.5	50	50	ENSMUST00000226878.2	ENSMUSG00000022206.8	Npr3	chr15	protein_coding	natriuretic peptide receptor 3
chr15	11964612;11967282	11967186;11967900	+	11964612	11967900	cassetteExon	0.5	100	100	ENSMUST00000191278.7	ENSMUSG00000099349.8	1700047G03Rik	chr15	lncRNA	RIKEN cDNA 1700047G03 gene
chr15	11964737	11967900	+	11964612	11967900	A5SS	0.25	50	50	ENSMUST00000191278.7	ENSMUSG00000099349.8	1700047G03Rik	chr15	lncRNA	RIKEN cDNA 1700047G03 gene
chr15	11967691	11967900	+	11964612	11967900	A5SS	0.25	50	50	ENSMUST00000191278.7	ENSMUSG00000099349.8	1700047G03Rik	chr15	lncRNA	RIKEN cDNA 1700047G03 gene
chr15	11967282;11967691	11967617;11967900	+	11967282	11967900	cassetteExon	0.5	100	100	ENSMUST00000188888.7	ENSMUSG00000099349.8	1700047G03Rik	chr15	lncRNA	RIKEN cDNA 1700047G03 gene
chr15	11964737	11967900	+	11967282	11967900	A5SS&ES	0.25	50	50	ENSMUST00000188888.7	ENSMUSG00000099349.8	1700047G03Rik	chr15	lncRNA	RIKEN cDNA 1700047G03 gene
chr15	11967044	11967186	+	11964612	11967186	A5SS	0.5	50	50	ENSMUST00000188888.7	ENSMUSG00000099349.8	1700047G03Rik	chr15	lncRNA	RIKEN cDNA 1700047G03 gene
chr15	11967691	11967900	+	11964737	11967900	A5SS	0.25	50	50	ENSMUST00000186347.7	ENSMUSG00000099349.8	1700047G03Rik	chr15	lncRNA	RIKEN cDNA 1700047G03 gene
chr15	11964612	11967900	+	11967282	11967900	5pMXE	0.25	50	50	ENSMUST00000190000.2	ENSMUSG00000099349.8	1700047G03Rik	chr15	lncRNA	RIKEN cDNA 1700047G03 gene
chr15	11993947	11996957	-	11993947	11996037	5pMXE	0.33	50	50	ENSMUST00000022816.15	ENSMUSG00000022205.16	Sub1	chr15	protein_coding	SUB1 homolog, transcriptional regulator
chr15	11993947	11995714	-	11993947	11996037	A5SS	0.33	50	50	ENSMUST00000022816.15	ENSMUSG00000022205.16	Sub1	chr15	protein_coding	SUB1 homolog, transcriptional regulator
chr15	11993947	11995714	-	11993947	11996957	A5SS	0.33	50	50	ENSMUST00000110504.2	ENSMUSG00000022205.16	Sub1	chr15	protein_coding	SUB1 homolog, transcriptional regulator
chr15	12118033	12136482	+	12118033;12118424	12118325;12136482	ES	0.33	50	50	ENSMUST00000122941.8	ENSMUSG00000022201.17	Zfr	chr15	protein_coding	zinc finger RNA binding protein
chr15	12166372	12171845	+	12166372;12170999	12170902;12171845	ES	0.5	50	50	ENSMUST00000122941.8	ENSMUSG00000022201.17	Zfr	chr15	protein_coding	zinc finger RNA binding protein
chr15	12118424	12122093	+	12118424	12136482	A3SS	0.5	50	50	ENSMUST00000122941.8	ENSMUSG00000022201.17	Zfr	chr15	protein_coding	zinc finger RNA binding protein
chr15	12160776	12162185	+	12160776	12162200	A3SS	0.5	50	50	ENSMUST00000122941.8	ENSMUSG00000022201.17	Zfr	chr15	protein_coding	zinc finger RNA binding protein
chr15	12135376	12136482	+	12118424	12136482	A5SS	0.33	50	50	ENSMUST00000122941.8	ENSMUSG00000022201.17	Zfr	chr15	protein_coding	zinc finger RNA binding protein
chr15	12160766	12162200	+	12160776	12162200	A5SS	0.5	50	50	ENSMUST00000122941.8	ENSMUSG00000022201.17	Zfr	chr15	protein_coding	zinc finger RNA binding protein
chr15	12179865	12180708	+	12171940	12180708	A5SS	0.5	50	50	ENSMUST00000122941.8	ENSMUSG00000022201.17	Zfr	chr15	protein_coding	zinc finger RNA binding protein
chr15	12135376	12136482	+	12118033	12136482	A5SS	0.33	50	50	ENSMUST00000228196.2	ENSMUSG00000022201.17	Zfr	chr15	protein_coding	zinc finger RNA binding protein
chr15	12166372	12171845	+	12170999	12171845	5pMXE	0.5	50	50	ENSMUST00000147492.2	ENSMUSG00000022201.17	Zfr	chr15	protein_coding	zinc finger RNA binding protein
chr15	12230420	12259705	+	12230420	12232842	A3SS&ES	0.5	50	50	ENSMUST00000038172.16	ENSMUSG00000039458.16	Mtmr12	chr15	protein_coding	myotubularin related protein 12
chr15	12265797	12266698	+	12265797	12266693	A3SS	0.5	50	50	ENSMUST00000038172.16	ENSMUSG00000039458.16	Mtmr12	chr15	protein_coding	myotubularin related protein 12
chr15	12223640	12230360	+	12205365	12230360	A5SS	0.5	50	50	ENSMUST00000038172.16	ENSMUSG00000039458.16	Mtmr12	chr15	protein_coding	myotubularin related protein 12
chr15	12236206	12238015	+	12236234	12238015	A5SS	0.5	50	50	ENSMUST00000038172.16	ENSMUSG00000039458.16	Mtmr12	chr15	protein_coding	myotubularin related protein 12
chr15	12343237	12349454	+	12343237	12343359	3pMXE	0.5	50	50	ENSMUST00000228301.2	ENSMUSG00000022200.9	Golph3	chr15	protein_coding	golgi phosphoprotein 3
chr15	12343237;12343407	12343359;12349454	+	12343237	12349454	cassetteExon	0.5	100	100	ENSMUST00000059680.7	ENSMUSG00000022200.9	Golph3	chr15	protein_coding	golgi phosphoprotein 3
chr15	12322042	12339714	+	12322042	12349454	A3SS	0.5	50	50	ENSMUST00000226517.2	ENSMUSG00000022200.9	Golph3	chr15	protein_coding	golgi phosphoprotein 3
chr15	12343237	12349454	+	12322042	12349454	A5SS	0.33	50	50	ENSMUST00000226517.2	ENSMUSG00000022200.9	Golph3	chr15	protein_coding	golgi phosphoprotein 3
chr15	12343407	12349454	+	12322042	12349454	A5SS	0.33	50	50	ENSMUST00000226517.2	ENSMUSG00000022200.9	Golph3	chr15	protein_coding	golgi phosphoprotein 3
chr15	12419658	12442566	-	12419658;12437345	12437190;12442566	ES	0.5	50	50	ENSMUST00000075317.12	ENSMUSG00000022197.17	Pdzd2	chr15	protein_coding	PDZ domain containing 2
chr15	12588749	12592167	-	12458385	12592167	A3SS	0.5	50	50	ENSMUST00000075317.12	ENSMUSG00000022197.17	Pdzd2	chr15	protein_coding	PDZ domain containing 2
chr15	12458385	12493402	-	12458385	12592167	A5SS	0.25	50	50	ENSMUST00000075317.12	ENSMUSG00000022197.17	Pdzd2	chr15	protein_coding	PDZ domain containing 2
chr15	12458385	12545576	-	12458385	12592167	A5SS	0.25	50	50	ENSMUST00000075317.12	ENSMUSG00000022197.17	Pdzd2	chr15	protein_coding	PDZ domain containing 2
chr15	12458385	12549322	-	12458385	12592167	A5SS	0.25	50	50	ENSMUST00000075317.12	ENSMUSG00000022197.17	Pdzd2	chr15	protein_coding	PDZ domain containing 2
chr15	12458385	12549322	-	12458385;12545605	12545576;12549322	ES	0.33	50	50	ENSMUST00000190929.2	ENSMUSG00000022197.17	Pdzd2	chr15	protein_coding	PDZ domain containing 2
chr15	12522917	12549322	-	12545605	12549322	A3SS&ES	0.33	50	50	ENSMUST00000190929.2	ENSMUSG00000022197.17	Pdzd2	chr15	protein_coding	PDZ domain containing 2
chr15	12458385	12493402	-	12458385	12545576	A5SS	0.33	50	50	ENSMUST00000190929.2	ENSMUSG00000022197.17	Pdzd2	chr15	protein_coding	PDZ domain containing 2
chr15	12592996	12599071	-	12592996	12716228	A5SS	0.5	50	50	ENSMUST00000189469.7	ENSMUSG00000022197.17	Pdzd2	chr15	protein_coding	PDZ domain containing 2
chr15	12458385	12549322	-	12458385	12493402	5pMXE	0.25	50	50	ENSMUST00000186113.2	ENSMUSG00000022197.17	Pdzd2	chr15	protein_coding	PDZ domain containing 2
chr15	12522917	12549322	-	12458385	12549322	A3SS	0.33	50	50	ENSMUST00000189324.2	ENSMUSG00000022197.17	Pdzd2	chr15	protein_coding	PDZ domain containing 2
chr15	12458385	12549322	-	12545605	12549322	3pMXE	0.33	50	50	ENSMUST00000187398.2	ENSMUSG00000022197.17	Pdzd2	chr15	protein_coding	PDZ domain containing 2
chr15	12821639	12824553	-	12821639;12823792	12823647;12824553	ES	0.5	50	50	ENSMUST00000057256.5	ENSMUSG00000022195.8	6030458C11Rik	chr15	protein_coding	RIKEN cDNA 6030458C11 gene
chr15	12813786	12814277	-	12812158	12814277	A3SS	0.5	50	50	ENSMUST00000057256.5	ENSMUSG00000022195.8	6030458C11Rik	chr15	protein_coding	RIKEN cDNA 6030458C11 gene
chr15	12818213	12821490	-	12818370	12821490	A3SS	0.5	50	50	ENSMUST00000057256.5	ENSMUSG00000022195.8	6030458C11Rik	chr15	protein_coding	RIKEN cDNA 6030458C11 gene
chr15	12827378	12830389	+	12827378	12833915	A3SS	0.33	50	50	ENSMUST00000169061.8	ENSMUSG00000022191.17	Drosha	chr15	protein_coding	drosha, ribonuclease type III
chr15	12827378	12832525	+	12827378	12833915	A3SS	0.33	50	50	ENSMUST00000169061.8	ENSMUSG00000022191.17	Drosha	chr15	protein_coding	drosha, ribonuclease type III
chr15	12825024	12826151	+	12825028	12826151	A5SS	0.5	50	50	ENSMUST00000169061.8	ENSMUSG00000022191.17	Drosha	chr15	protein_coding	drosha, ribonuclease type III
chr15	12827378;12832575	12832525;12834096	+	12827378;12830439	12830389;12834096	MXE	0.5	100	100	ENSMUST00000141706.8	ENSMUSG00000022191.17	Drosha	chr15	protein_coding	drosha, ribonuclease type III
chr15	18082204	18165854	-	18082204;18165398	18165218;18165854	ES	0.5	50	50	ENSMUST00000183117.3	ENSMUSG00000098150.3	4921515E04Rik	chr15	lncRNA	RIKEN cDNA 4921515E04 gene
chr15	18352844;18357358	18357306;18357653	-	18352844	18357653	cassetteExon	0.5	100	100	ENSMUST00000226383.2	ENSMUSG00000098150.3	4921515E04Rik	chr15	lncRNA	RIKEN cDNA 4921515E04 gene
chr15	18171813	18259825	-	18166072	18259825	A3SS	0.5	50	50	ENSMUST00000226383.2	ENSMUSG00000098150.3	4921515E04Rik	chr15	lncRNA	RIKEN cDNA 4921515E04 gene
chr15	18166072	18171197	-	18166072	18259825	A5SS	0.5	50	50	ENSMUST00000226383.2	ENSMUSG00000098150.3	4921515E04Rik	chr15	lncRNA	RIKEN cDNA 4921515E04 gene
chr15	18362418	18365458	-	18362418	18368309	A5SS	0.5	50	50	ENSMUST00000226383.2	ENSMUSG00000098150.3	4921515E04Rik	chr15	lncRNA	RIKEN cDNA 4921515E04 gene
chr15	18987026	18999950	+	18987026;18992135	18991999;18999950	ES	0.5	50	50	ENSMUST00000166873.9	ENSMUSG00000022321.16	Cdh10	chr15	protein_coding	cadherin 10
chr15	18820786	18899561	+	18819173	18899561	A5SS	0.5	50	50	ENSMUST00000166873.9	ENSMUSG00000022321.16	Cdh10	chr15	protein_coding	cadherin 10
chr15	20449452	20833383	+	20449452	20665524	3pMXE	0.33	50	50	ENSMUST00000227439.2	ENSMUSG00000115122.2	Gm49685	chr15	lncRNA	predicted gene, 49685
chr15	20449452	20638772	+	20449452	20665524	A3SS	0.33	50	50	ENSMUST00000227439.2	ENSMUSG00000115122.2	Gm49685	chr15	lncRNA	predicted gene, 49685
chr15	20449452;20638870	20638772;20833383	+	20449452	20833383	cassetteExon	0.5	100	100	ENSMUST00000228652.2	ENSMUSG00000115122.2	Gm49685	chr15	lncRNA	predicted gene, 49685
chr15	20833478	20968557	+	20833478	21111420	A3SS	0.5	50	50	ENSMUST00000226407.2	ENSMUSG00000040452.10	Cdh12	chr15	protein_coding	cadherin 12
chr15	23036668	23173537	+	22549378	23173537	A5SS	0.5	50	50	ENSMUST00000163361.8	ENSMUSG00000040420.16	Cdh18	chr15	protein_coding	cadherin 18
chr15	23410906	23460508	+	23410906	23436536	A3SS&ES	0.5	50	50	ENSMUST00000164787.8	ENSMUSG00000040420.16	Cdh18	chr15	protein_coding	cadherin 18
chr15	23446181	23460508	+	23446181	23460402	A3SS	0.33	50	50	ENSMUST00000164787.8	ENSMUSG00000040420.16	Cdh18	chr15	protein_coding	cadherin 18
chr15	23446181	23460511	+	23446181	23460402	A3SS	0.33	50	50	ENSMUST00000164787.8	ENSMUSG00000040420.16	Cdh18	chr15	protein_coding	cadherin 18
chr15	23446181	23460508	+	23446181	23460511	A3SS	0.33	50	50	ENSMUST00000165614.9	ENSMUSG00000040420.16	Cdh18	chr15	protein_coding	cadherin 18
chr15	23446181	23460508	+	23410906	23460508	A5SS	0.5	50	50	ENSMUST00000167623.2	ENSMUSG00000040420.16	Cdh18	chr15	protein_coding	cadherin 18
chr15	25006159	25027312	-	24987888	25027312	A3SS	0.5	50	50	ENSMUST00000180955.2	ENSMUSG00000097452.3	Gm2824	chr15	lncRNA	predicted gene 2824
chr15	25006159	25018226	-	25006159	25027312	A5SS	0.5	50	50	ENSMUST00000180696.3	ENSMUSG00000097452.3	Gm2824	chr15	lncRNA	predicted gene 2824
chr15	25143314	25179391	-	25143314	25149005	5pMXE	0.5	50	50	ENSMUST00000056401.5	ENSMUSG00000051237.8	9230109A22Rik	chr15	lncRNA	RIKEN cDNA 9230109A22 gene
chr15	25296274	25313330	-	25290188	25313330	A3SS	0.5	50	50	ENSMUST00000226199.2	ENSMUSG00000115355.2	4930445E18Rik	chr15	lncRNA	RIKEN cDNA 4930445E18 gene
chr15	25365004;25388453	25388300;25413638	-	25365004	25413638	cassetteExon	0.5	100	100	ENSMUST00000058845.9	ENSMUSG00000045763.9	Basp1	chr15	protein_coding	brain abundant, membrane attached signal protein 1
chr15	25415235	25461813	+	25415235	25458704	3pMXE	0.25	50	50	ENSMUST00000227204.2	ENSMUSG00000115729.2	Gm5468	chr15	lncRNA	predicted gene 5468
chr15	25415235	25433000	+	25415235	25458704	A3SS	0.25	50	50	ENSMUST00000227204.2	ENSMUSG00000115729.2	Gm5468	chr15	lncRNA	predicted gene 5468
chr15	25415235	25450581	+	25415235	25458704	A3SS	0.25	50	50	ENSMUST00000227204.2	ENSMUSG00000115729.2	Gm5468	chr15	lncRNA	predicted gene 5468
chr15	25415235	25433000	+	25415235	25461813	A3SS	0.25	50	50	ENSMUST00000226957.2	ENSMUSG00000115729.2	Gm5468	chr15	lncRNA	predicted gene 5468
chr15	25415235	25450581	+	25415235	25461813	A3SS	0.25	50	50	ENSMUST00000226957.2	ENSMUSG00000115729.2	Gm5468	chr15	lncRNA	predicted gene 5468
chr15	25415235	25433000	+	25415235	25450581	A3SS	0.25	50	50	ENSMUST00000228425.2	ENSMUSG00000115729.2	Gm5468	chr15	lncRNA	predicted gene 5468
chr15	25623116	25701648	+	25623116;25666610	25666512;25701648	ES	0.33	50	50	ENSMUST00000110457.8	ENSMUSG00000022272.18	Myo10	chr15	protein_coding	myosin X
chr15	25674687	25701648	+	25666610	25701648	A5SS	0.33	50	50	ENSMUST00000110457.8	ENSMUSG00000022272.18	Myo10	chr15	protein_coding	myosin X
chr15	25753406	25776107	+	25744342	25776107	A5SS	0.2	50	50	ENSMUST00000110457.8	ENSMUSG00000022272.18	Myo10	chr15	protein_coding	myosin X
chr15	25753406	25778167	+	25776518	25778167	A5SS&ES	0.25	50	50	ENSMUST00000110457.8	ENSMUSG00000022272.18	Myo10	chr15	protein_coding	myosin X
chr15	25759237	25776107	+	25744342	25776107	A5SS	0.2	50	50	ENSMUST00000110457.8	ENSMUSG00000022272.18	Myo10	chr15	protein_coding	myosin X
chr15	25759237	25778167	+	25776518	25778167	A5SS&ES	0.25	50	50	ENSMUST00000110457.8	ENSMUSG00000022272.18	Myo10	chr15	protein_coding	myosin X
chr15	25768864	25776107	+	25744342	25776107	A5SS	0.2	50	50	ENSMUST00000110457.8	ENSMUSG00000022272.18	Myo10	chr15	protein_coding	myosin X
chr15	25774394	25776107	+	25744342	25776107	A5SS	0.2	50	50	ENSMUST00000110457.8	ENSMUSG00000022272.18	Myo10	chr15	protein_coding	myosin X
chr15	25674687	25701648	+	25623116	25701648	A5SS	0.33	50	50	ENSMUST00000137601.8	ENSMUSG00000022272.18	Myo10	chr15	protein_coding	myosin X
chr15	25744342;25776518	25776107;25778167	+	25744342	25778167	cassetteExon	0.5	100	100	ENSMUST00000135981.8	ENSMUSG00000022272.18	Myo10	chr15	protein_coding	myosin X
chr15	25753406	25778167	+	25744342	25778167	A5SS	0.25	50	50	ENSMUST00000135981.8	ENSMUSG00000022272.18	Myo10	chr15	protein_coding	myosin X
chr15	25759237	25778167	+	25744342	25778167	A5SS	0.25	50	50	ENSMUST00000135981.8	ENSMUSG00000022272.18	Myo10	chr15	protein_coding	myosin X
chr15	25753406;25776518	25776107;25778167	+	25753406	25778167	cassetteExon	0.5	100	100	ENSMUST00000022882.12	ENSMUSG00000022272.18	Myo10	chr15	protein_coding	myosin X
chr15	25759237	25778167	+	25753406	25778167	A5SS	0.25	50	50	ENSMUST00000022882.12	ENSMUSG00000022272.18	Myo10	chr15	protein_coding	myosin X
chr15	25759237	25776107	+	25753406	25776107	A5SS	0.2	50	50	ENSMUST00000135173.8	ENSMUSG00000022272.18	Myo10	chr15	protein_coding	myosin X
chr15	25768864	25776107	+	25753406	25776107	A5SS	0.2	50	50	ENSMUST00000135173.8	ENSMUSG00000022272.18	Myo10	chr15	protein_coding	myosin X
chr15	25774394	25776107	+	25753406	25776107	A5SS	0.2	50	50	ENSMUST00000135173.8	ENSMUSG00000022272.18	Myo10	chr15	protein_coding	myosin X
chr15	25759237	25778167	+	25759237	25776107	3pMXE	0.5	50	50	ENSMUST00000131834.2	ENSMUSG00000022272.18	Myo10	chr15	protein_coding	myosin X
chr15	25768864	25776107	+	25759237	25776107	A5SS	0.2	50	50	ENSMUST00000131834.2	ENSMUSG00000022272.18	Myo10	chr15	protein_coding	myosin X
chr15	25774394	25776107	+	25759237	25776107	A5SS	0.2	50	50	ENSMUST00000131834.2	ENSMUSG00000022272.18	Myo10	chr15	protein_coding	myosin X
chr15	25759237;25776518	25776107;25778167	+	25759237	25778167	cassetteExon	0.5	100	100	ENSMUST00000124966.8	ENSMUSG00000022272.18	Myo10	chr15	protein_coding	myosin X
chr15	25774394	25776107	+	25768864	25776107	A5SS	0.2	50	50	ENSMUST00000151360.7	ENSMUSG00000022272.18	Myo10	chr15	protein_coding	myosin X
chr15	25910683	25964310	+	25895229	25964310	A5SS	0.16	50	50	ENSMUST00000022881.15	ENSMUSG00000022270.17	Retreg1	chr15	protein_coding	reticulophagy regulator 1
chr15	25933712	25964310	+	25895229	25964310	A5SS	0.16	50	50	ENSMUST00000022881.15	ENSMUSG00000022270.17	Retreg1	chr15	protein_coding	reticulophagy regulator 1
chr15	25941036	25964310	+	25895229	25964310	A5SS	0.16	50	50	ENSMUST00000022881.15	ENSMUSG00000022270.17	Retreg1	chr15	protein_coding	reticulophagy regulator 1
chr15	25941329	25964310	+	25895229	25964310	A5SS	0.16	50	50	ENSMUST00000022881.15	ENSMUSG00000022270.17	Retreg1	chr15	protein_coding	reticulophagy regulator 1
chr15	25942867	25964310	+	25895229	25964310	A5SS	0.16	50	50	ENSMUST00000022881.15	ENSMUSG00000022270.17	Retreg1	chr15	protein_coding	reticulophagy regulator 1
chr15	25933712	25964310	+	25910683	25964310	A5SS	0.16	50	50	ENSMUST00000228600.2	ENSMUSG00000022270.17	Retreg1	chr15	protein_coding	reticulophagy regulator 1
chr15	25941036	25964310	+	25910683	25964310	A5SS	0.16	50	50	ENSMUST00000228600.2	ENSMUSG00000022270.17	Retreg1	chr15	protein_coding	reticulophagy regulator 1
chr15	25941329	25964310	+	25910683	25964310	A5SS	0.16	50	50	ENSMUST00000228600.2	ENSMUSG00000022270.17	Retreg1	chr15	protein_coding	reticulophagy regulator 1
chr15	25942867	25964310	+	25910683	25964310	A5SS	0.16	50	50	ENSMUST00000228600.2	ENSMUSG00000022270.17	Retreg1	chr15	protein_coding	reticulophagy regulator 1
chr15	25941036	25964310	+	25933712	25964310	A5SS	0.16	50	50	ENSMUST00000228327.2	ENSMUSG00000022270.17	Retreg1	chr15	protein_coding	reticulophagy regulator 1
chr15	25941329	25964310	+	25933712	25964310	A5SS	0.16	50	50	ENSMUST00000228327.2	ENSMUSG00000022270.17	Retreg1	chr15	protein_coding	reticulophagy regulator 1
chr15	25942867	25964310	+	25933712	25964310	A5SS	0.16	50	50	ENSMUST00000228327.2	ENSMUSG00000022270.17	Retreg1	chr15	protein_coding	reticulophagy regulator 1
chr15	25941036	25964310	+	25941329	25964310	A5SS	0.16	50	50	ENSMUST00000227275.2	ENSMUSG00000022270.17	Retreg1	chr15	protein_coding	reticulophagy regulator 1
chr15	25942867	25964310	+	25941329	25964310	A5SS	0.16	50	50	ENSMUST00000227275.2	ENSMUSG00000022270.17	Retreg1	chr15	protein_coding	reticulophagy regulator 1
chr15	25941036	25964310	+	25941036;25941329	25941151;25964310	ES	0.33	50	50	ENSMUST00000226750.2	ENSMUSG00000022270.17	Retreg1	chr15	protein_coding	reticulophagy regulator 1
chr15	25941036	25941212	+	25941036	25941151	A3SS	0.33	50	50	ENSMUST00000226750.2	ENSMUSG00000022270.17	Retreg1	chr15	protein_coding	reticulophagy regulator 1
chr15	25941036;25941329	25941212;25964310	+	25941036	25964310	cassetteExon	0.5	100	100	ENSMUST00000226438.2	ENSMUSG00000022270.17	Retreg1	chr15	protein_coding	reticulophagy regulator 1
chr15	25942867	25964310	+	25941036	25964310	A5SS	0.16	50	50	ENSMUST00000226438.2	ENSMUSG00000022270.17	Retreg1	chr15	protein_coding	reticulophagy regulator 1
chr15	25987132	25987316	+	25987132	25987247	A3SS	0.5	50	50	ENSMUST00000061875.8	ENSMUSG00000052253.7	Zfp622	chr15	protein_coding	zinc finger protein 622
chr15	26311212	26409183	+	26311212;26388026	26387834;26409183	ES	0.5	50	50	ENSMUST00000140840.8	ENSMUSG00000022269.14	Marchf11	chr15	protein_coding	membrane associated ring-CH-type finger 11
chr15	26311212	26409183	+	26388026	26409183	5pMXE	0.5	50	50	ENSMUST00000155819.2	ENSMUSG00000022269.14	Marchf11	chr15	protein_coding	membrane associated ring-CH-type finger 11
chr15	27606547	27608678	-	27542922	27608678	A3SS	0.5	50	50	ENSMUST00000228179.2	ENSMUSG00000046034.9	Otulin	chr15	protein_coding	OTU deubiquitinase with linear linkage specificity
chr15	27619709	27630544	-	27619709;27623444	27623368;27630544	ES	0.5	50	50	ENSMUST00000059662.8	ENSMUSG00000046034.9	Otulin	chr15	protein_coding	OTU deubiquitinase with linear linkage specificity
chr15	27657157	27658131	-	27657157;27657349	27657262;27658131	ES	0.5	50	50	ENSMUST00000226170.2	ENSMUSG00000056069.11	Otulinl	chr15	protein_coding	OTU deubiquitinase with linear linkage specificity like
chr15	27660104	27664430	-	27660104;27662574	27662425;27664430	ES	0.5	50	50	ENSMUST00000226170.2	ENSMUSG00000056069.11	Otulinl	chr15	protein_coding	OTU deubiquitinase with linear linkage specificity like
chr15	27658277	27659976	-	27658400	27659976	A3SS	0.5	50	50	ENSMUST00000226170.2	ENSMUSG00000056069.11	Otulinl	chr15	protein_coding	OTU deubiquitinase with linear linkage specificity like
chr15	27660076	27662425	-	27660104	27662425	A3SS	0.5	50	50	ENSMUST00000226170.2	ENSMUSG00000056069.11	Otulinl	chr15	protein_coding	OTU deubiquitinase with linear linkage specificity like
chr15	27660104	27664430	-	27660104	27662425	5pMXE	0.5	50	50	ENSMUST00000226581.2	ENSMUSG00000056069.11	Otulinl	chr15	protein_coding	OTU deubiquitinase with linear linkage specificity like
chr15	27741365	27742458	-	27741365	27742390	5pMXE	0.33	50	50	ENSMUST00000227999.2	ENSMUSG00000022263.11	Trio	chr15	protein_coding	triple functional domain (PTPRF interacting)
chr15	27741365	27742470	-	27741365	27742390	5pMXE	0.33	50	50	ENSMUST00000227999.2	ENSMUSG00000022263.11	Trio	chr15	protein_coding	triple functional domain (PTPRF interacting)
chr15	27771506	27772996	-	27770491	27772996	A3SS	0.5	50	50	ENSMUST00000090247.7	ENSMUSG00000022263.11	Trio	chr15	protein_coding	triple functional domain (PTPRF interacting)
chr15	27741365	27742470	-	27741365	27742458	A5SS	0.33	50	50	ENSMUST00000090247.7	ENSMUSG00000022263.11	Trio	chr15	protein_coding	triple functional domain (PTPRF interacting)
chr15	27774259	27788161	-	27774259	27805716	A5SS	0.5	50	50	ENSMUST00000090247.7	ENSMUSG00000022263.11	Trio	chr15	protein_coding	triple functional domain (PTPRF interacting)
chr15	27919377	27995167	-	27919377	28025426	A5SS	0.33	50	50	ENSMUST00000090247.7	ENSMUSG00000022263.11	Trio	chr15	protein_coding	triple functional domain (PTPRF interacting)
chr15	27919377	28024884	-	27919377	28025426	A5SS	0.33	50	50	ENSMUST00000090247.7	ENSMUSG00000022263.11	Trio	chr15	protein_coding	triple functional domain (PTPRF interacting)
chr15	27919377	27995167	-	27919377	28024884	A5SS	0.33	50	50	ENSMUST00000226775.2	ENSMUSG00000022263.11	Trio	chr15	protein_coding	triple functional domain (PTPRF interacting)
chr15	30481040	30619969	+	30481040;30619399	30619368;30619969	ES	0.5	50	50	ENSMUST00000081728.7	ENSMUSG00000022240.11	Ctnnd2	chr15	protein_coding	catenin (cadherin associated protein), delta 2
chr15	30905979	30922001	+	30905979;30920932	30920858;30922001	ES	0.5	50	50	ENSMUST00000081728.7	ENSMUSG00000022240.11	Ctnnd2	chr15	protein_coding	catenin (cadherin associated protein), delta 2
chr15	30173309	30185270	+	30173309	30332156	A3SS	0.5	50	50	ENSMUST00000081728.7	ENSMUSG00000022240.11	Ctnnd2	chr15	protein_coding	catenin (cadherin associated protein), delta 2
chr15	30481040	30499449	+	30481040	30619368	A3SS	0.33	50	50	ENSMUST00000081728.7	ENSMUSG00000022240.11	Ctnnd2	chr15	protein_coding	catenin (cadherin associated protein), delta 2
chr15	30457988	30480928	+	30332292	30480928	A5SS	0.33	50	50	ENSMUST00000081728.7	ENSMUSG00000022240.11	Ctnnd2	chr15	protein_coding	catenin (cadherin associated protein), delta 2
chr15	30458131	30480928	+	30332292	30480928	A5SS	0.33	50	50	ENSMUST00000081728.7	ENSMUSG00000022240.11	Ctnnd2	chr15	protein_coding	catenin (cadherin associated protein), delta 2
chr15	30481040	30499449	+	30481040	30619969	A3SS	0.33	50	50	ENSMUST00000226116.2	ENSMUSG00000022240.11	Ctnnd2	chr15	protein_coding	catenin (cadherin associated protein), delta 2
chr15	30457988	30480928	+	30458131	30480928	A5SS	0.33	50	50	ENSMUST00000228695.2	ENSMUSG00000022240.11	Ctnnd2	chr15	protein_coding	catenin (cadherin associated protein), delta 2
chr15	31224729	31272535	+	31224729;31236015	31235919;31272535	ES	0.33	50	50	ENSMUST00000044524.16	ENSMUSG00000039168.16	Dap	chr15	protein_coding	death-associated protein
chr15	31224835	31235919	+	31224729	31235919	A5SS	0.33	50	50	ENSMUST00000044524.16	ENSMUSG00000039168.16	Dap	chr15	protein_coding	death-associated protein
chr15	31225450	31235919	+	31224729	31235919	A5SS	0.33	50	50	ENSMUST00000044524.16	ENSMUSG00000039168.16	Dap	chr15	protein_coding	death-associated protein
chr15	31268636	31272535	+	31236015	31272535	A5SS	0.33	50	50	ENSMUST00000044524.16	ENSMUSG00000039168.16	Dap	chr15	protein_coding	death-associated protein
chr15	31268636	31272535	+	31224729	31272535	A5SS	0.33	50	50	ENSMUST00000186109.2	ENSMUSG00000039168.16	Dap	chr15	protein_coding	death-associated protein
chr15	31224729	31272535	+	31236015	31272535	A5SS&ES	0.33	50	50	ENSMUST00000186547.7	ENSMUSG00000039168.16	Dap	chr15	protein_coding	death-associated protein
chr15	31225450	31235919	+	31224835	31235919	A5SS	0.33	50	50	ENSMUST00000186547.7	ENSMUSG00000039168.16	Dap	chr15	protein_coding	death-associated protein
chr15	31305278	31367185	-	31305278;31325361	31325232;31367185	ES	0.33	50	50	ENSMUST00000123325.9	ENSMUSG00000022237.18	Ankrd33b	chr15	protein_coding	ankyrin repeat domain 33B
chr15	31305278;31324084	31323988;31325232	-	31305278	31325232	cassetteExon	0.5	100	100	ENSMUST00000123325.9	ENSMUSG00000022237.18	Ankrd33b	chr15	protein_coding	ankyrin repeat domain 33B
chr15	31298111	31305138	-	31298130	31305138	A3SS	0.5	50	50	ENSMUST00000123325.9	ENSMUSG00000022237.18	Ankrd33b	chr15	protein_coding	ankyrin repeat domain 33B
chr15	31325149	31325232	-	31305278	31325232	A3SS	0.33	50	50	ENSMUST00000123325.9	ENSMUSG00000022237.18	Ankrd33b	chr15	protein_coding	ankyrin repeat domain 33B
chr15	31325202	31367185	-	31325361	31367185	A3SS&ES	0.33	50	50	ENSMUST00000123325.9	ENSMUSG00000022237.18	Ankrd33b	chr15	protein_coding	ankyrin repeat domain 33B
chr15	31305278	31308288	-	31305278	31325232	A5SS	0.25	50	50	ENSMUST00000123325.9	ENSMUSG00000022237.18	Ankrd33b	chr15	protein_coding	ankyrin repeat domain 33B
chr15	31325361	31367212	-	31325361	31367185	A5SS	0.5	50	50	ENSMUST00000123325.9	ENSMUSG00000022237.18	Ankrd33b	chr15	protein_coding	ankyrin repeat domain 33B
chr15	31325149	31325232	-	31324084	31325232	A3SS	0.33	50	50	ENSMUST00000156679.2	ENSMUSG00000022237.18	Ankrd33b	chr15	protein_coding	ankyrin repeat domain 33B
chr15	31305278	31308288	-	31305278	31323988	A5SS	0.25	50	50	ENSMUST00000156679.2	ENSMUSG00000022237.18	Ankrd33b	chr15	protein_coding	ankyrin repeat domain 33B
chr15	31325202	31367185	-	31305278	31367185	A3SS	0.33	50	50	ENSMUST00000044324.9	ENSMUSG00000022237.18	Ankrd33b	chr15	protein_coding	ankyrin repeat domain 33B
chr15	31305278	31308288	-	31305278	31367185	A5SS	0.25	50	50	ENSMUST00000044324.9	ENSMUSG00000022237.18	Ankrd33b	chr15	protein_coding	ankyrin repeat domain 33B
chr15	31305278	31323988	-	31305278	31367185	A5SS	0.25	50	50	ENSMUST00000044324.9	ENSMUSG00000022237.18	Ankrd33b	chr15	protein_coding	ankyrin repeat domain 33B
chr15	31305278	31367185	-	31305278	31325232	A5SS&ES	0.25	50	50	ENSMUST00000110410.10	ENSMUSG00000022237.18	Ankrd33b	chr15	protein_coding	ankyrin repeat domain 33B
chr15	31509968;31512671	31512479;31530949	-	31509968	31530949	cassetteExon	0.5	100	100	ENSMUST00000090227.6	ENSMUSG00000039100.11	Marchf6	chr15	protein_coding	membrane associated ring-CH-type finger 6
chr15	31569085	31581986	+	31565647	31581986	A5SS	0.33	50	50	ENSMUST00000226951.2	ENSMUSG00000022235.16	Cmbl	chr15	protein_coding	carboxymethylenebutenolidase-like (Pseudomonas)
chr15	31572399	31581986	+	31565647	31581986	A5SS	0.33	50	50	ENSMUST00000226951.2	ENSMUSG00000022235.16	Cmbl	chr15	protein_coding	carboxymethylenebutenolidase-like (Pseudomonas)
chr15	31582183	31584111	+	31582219	31584111	A5SS	0.5	50	50	ENSMUST00000226951.2	ENSMUSG00000022235.16	Cmbl	chr15	protein_coding	carboxymethylenebutenolidase-like (Pseudomonas)
chr15	31572399	31581986	+	31569085	31581986	A5SS	0.33	50	50	ENSMUST00000162532.8	ENSMUSG00000022235.16	Cmbl	chr15	protein_coding	carboxymethylenebutenolidase-like (Pseudomonas)
chr15	31598206	31601448	-	31598206	31601747	A5SS	0.5	50	50	ENSMUST00000022842.16	ENSMUSG00000022234.16	Cct5	chr15	protein_coding	chaperonin containing Tcp1, subunit 5 (epsilon)
chr15	31602295	31603595	+	31602295	31617017	A3SS	0.33	50	50	ENSMUST00000160146.2	ENSMUSG00000039065.12	Atpsckmt	chr15	protein_coding	ATP synthase C subunit lysine N-methyltransferase
chr15	31602295	31606057	+	31602295	31617017	A3SS	0.33	50	50	ENSMUST00000160146.2	ENSMUSG00000039065.12	Atpsckmt	chr15	protein_coding	ATP synthase C subunit lysine N-methyltransferase
chr15	31609762	31617017	+	31602295	31617017	A5SS	0.5	50	50	ENSMUST00000160146.2	ENSMUSG00000039065.12	Atpsckmt	chr15	protein_coding	ATP synthase C subunit lysine N-methyltransferase
chr15	31602295;31603720	31603595;31606057	+	31602295	31606057	cassetteExon	0.5	100	100	ENSMUST00000042702.7	ENSMUSG00000039065.12	Atpsckmt	chr15	protein_coding	ATP synthase C subunit lysine N-methyltransferase
chr15	32245445	32266711	+	32245445	32347366	A3SS	0.5	50	50	ENSMUST00000226876.2	ENSMUSG00000022231.11	Sema5a	chr15	protein_coding	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
chr15	32245754	32347366	+	32245445	32347366	A5SS	0.5	50	50	ENSMUST00000226876.2	ENSMUSG00000022231.11	Sema5a	chr15	protein_coding	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
chr15	32673681;32678118	32677902;32679241	+	32673681	32679241	cassetteExon	0.5	100	100	ENSMUST00000067458.7	ENSMUSG00000022231.11	Sema5a	chr15	protein_coding	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
chr15	32602204	32609369	+	32575166	32609369	A5SS	0.5	50	50	ENSMUST00000067458.7	ENSMUSG00000022231.11	Sema5a	chr15	protein_coding	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
chr15	32673681	32679241	+	32673681	32677902	3pMXE	0.5	50	50	ENSMUST00000227976.2	ENSMUSG00000022231.11	Sema5a	chr15	protein_coding	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
chr15	33065946	33073486	-	33065946	33066257	5pMXE	0.5	50	50	ENSMUST00000226596.2	ENSMUSG00000115140.2	Gm32764	chr15	lncRNA	predicted gene, 32764
chr15	33064619	33065828	-	33055634	33065828	A3SS	0.5	50	50	ENSMUST00000226596.2	ENSMUSG00000115140.2	Gm32764	chr15	lncRNA	predicted gene, 32764
chr15	33083468;33090640	33090445;33212962	+	33083468	33212962	cassetteExon	0.5	100	100	ENSMUST00000042167.10	ENSMUSG00000039007.11	Cpq	chr15	protein_coding	carboxypeptidase Q
chr15	33083468;33154394	33154305;33212962	+	33083468	33212962	cassetteExon	0.5	100	100	ENSMUST00000042167.10	ENSMUSG00000039007.11	Cpq	chr15	protein_coding	carboxypeptidase Q
chr15	33083468;33182871	33182796;33212962	+	33083468	33212962	cassetteExon	0.5	100	100	ENSMUST00000042167.10	ENSMUSG00000039007.11	Cpq	chr15	protein_coding	carboxypeptidase Q
chr15	33213145	33250072	+	33213409	33250072	A5SS	0.5	50	50	ENSMUST00000042167.10	ENSMUSG00000039007.11	Cpq	chr15	protein_coding	carboxypeptidase Q
chr15	33083468	33154305	+	33083468	33090445	3pMXE	0.25	50	50	ENSMUST00000227018.2	ENSMUSG00000039007.11	Cpq	chr15	protein_coding	carboxypeptidase Q
chr15	33083468	33182796	+	33083468	33090445	3pMXE	0.25	50	50	ENSMUST00000227018.2	ENSMUSG00000039007.11	Cpq	chr15	protein_coding	carboxypeptidase Q
chr15	33083468	33212962	+	33083468	33090445	3pMXE	0.25	50	50	ENSMUST00000227018.2	ENSMUSG00000039007.11	Cpq	chr15	protein_coding	carboxypeptidase Q
chr15	33083468;33090640	33090445;33212962	+	33083468;33154394	33154305;33212962	MXE	0.5	100	100	ENSMUST00000228916.2	ENSMUSG00000039007.11	Cpq	chr15	protein_coding	carboxypeptidase Q
chr15	33083468;33182871	33182796;33212962	+	33083468;33154394	33154305;33212962	MXE	0.5	100	100	ENSMUST00000228916.2	ENSMUSG00000039007.11	Cpq	chr15	protein_coding	carboxypeptidase Q
chr15	33083468;33182871	33182796;33212962	+	33083468;33090640	33090445;33212962	MXE	0.5	100	100	ENSMUST00000226483.2	ENSMUSG00000039007.11	Cpq	chr15	protein_coding	carboxypeptidase Q
chr15	33083468	33212962	+	33090640	33212962	5pMXE	0.25	50	50	ENSMUST00000226896.2	ENSMUSG00000039007.11	Cpq	chr15	protein_coding	carboxypeptidase Q
chr15	33154394	33212962	+	33090640	33212962	A5SS	0.25	50	50	ENSMUST00000226896.2	ENSMUSG00000039007.11	Cpq	chr15	protein_coding	carboxypeptidase Q
chr15	33182871	33212962	+	33090640	33212962	A5SS	0.25	50	50	ENSMUST00000226896.2	ENSMUSG00000039007.11	Cpq	chr15	protein_coding	carboxypeptidase Q
chr15	34114254	34116457	+	34114254;34115121	34114945;34116457	ES	0.5	50	50	ENSMUST00000022865.17	ENSMUSG00000022255.17	Mtdh	chr15	protein_coding	metadherin
chr15	34115121	34118026	+	34115121;34116522	34116457;34118026	ES	0.33	50	50	ENSMUST00000022865.17	ENSMUSG00000022255.17	Mtdh	chr15	protein_coding	metadherin
chr15	34118256	34131310	+	34118256;34123912	34123814;34131310	ES	0.5	50	50	ENSMUST00000022865.17	ENSMUSG00000022255.17	Mtdh	chr15	protein_coding	metadherin
chr15	34136973	34140838	+	34136973;34140043	34139887;34140838	ES	0.5	50	50	ENSMUST00000022865.17	ENSMUSG00000022255.17	Mtdh	chr15	protein_coding	metadherin
chr15	34118256;34121658	34121569;34123814	+	34118256	34123814	cassetteExon	0.5	100	100	ENSMUST00000022865.17	ENSMUSG00000022255.17	Mtdh	chr15	protein_coding	metadherin
chr15	34134544	34136820	+	34134544	34136833	A3SS	0.5	50	50	ENSMUST00000022865.17	ENSMUSG00000022255.17	Mtdh	chr15	protein_coding	metadherin
chr15	34133837	34134437	+	34131434	34134437	A5SS	0.5	50	50	ENSMUST00000022865.17	ENSMUSG00000022255.17	Mtdh	chr15	protein_coding	metadherin
chr15	34118256	34131310	+	34118256	34123814	3pMXE	0.33	50	50	ENSMUST00000163697.2	ENSMUSG00000022255.17	Mtdh	chr15	protein_coding	metadherin
chr15	34099731	34118026	+	34099731	34114170	A3SS	0.5	50	50	ENSMUST00000163697.2	ENSMUSG00000022255.17	Mtdh	chr15	protein_coding	metadherin
chr15	34115121	34118026	+	34099731	34118026	A5SS	0.33	50	50	ENSMUST00000168991.8	ENSMUSG00000022255.17	Mtdh	chr15	protein_coding	metadherin
chr15	34116522	34118026	+	34099731	34118026	A5SS	0.33	50	50	ENSMUST00000168991.8	ENSMUSG00000022255.17	Mtdh	chr15	protein_coding	metadherin
chr15	34118256	34121569	+	34118256	34131310	A3SS	0.33	50	50	ENSMUST00000163333.9	ENSMUSG00000022255.17	Mtdh	chr15	protein_coding	metadherin
chr15	34114254;34116522	34116457;34118026	+	34114254;34115121	34114945;34118026	MXE	0.5	100	100	ENSMUST00000170050.8	ENSMUSG00000022255.17	Mtdh	chr15	protein_coding	metadherin
chr15	34114254	34116457	+	34114254	34114945	3pMXE	0.5	50	50	ENSMUST00000226331.2	ENSMUSG00000022255.17	Mtdh	chr15	protein_coding	metadherin
chr15	34114254	34116457	+	34115121	34116457	5pMXE	0.5	50	50	ENSMUST00000169905.2	ENSMUSG00000022255.17	Mtdh	chr15	protein_coding	metadherin
chr15	34238568	34272490	+	34238568;34258938	34258827;34272490	ES	0.33	50	50	ENSMUST00000022867.5	ENSMUSG00000022257.5	Laptm4b	chr15	protein_coding	lysosomal-associated protein transmembrane 4B
chr15	34273496	34277578	+	34273496;34276380	34276282;34277578	ES	0.5	50	50	ENSMUST00000022867.5	ENSMUSG00000022257.5	Laptm4b	chr15	protein_coding	lysosomal-associated protein transmembrane 4B
chr15	34258938;34264737	34264702;34272490	+	34258938	34272490	cassetteExon	0.5	100	100	ENSMUST00000022867.5	ENSMUSG00000022257.5	Laptm4b	chr15	protein_coding	lysosomal-associated protein transmembrane 4B
chr15	34264737	34272490	+	34238568	34272490	A5SS	0.33	50	50	ENSMUST00000226437.2	ENSMUSG00000022257.5	Laptm4b	chr15	protein_coding	lysosomal-associated protein transmembrane 4B
chr15	34273496	34277578	+	34273496	34276282	3pMXE	0.5	50	50	ENSMUST00000226627.2	ENSMUSG00000022257.5	Laptm4b	chr15	protein_coding	lysosomal-associated protein transmembrane 4B
chr15	34307054	34316637	+	34307054	34308548	3pMXE	0.5	50	50	ENSMUST00000227119.2	ENSMUSG00000022324.16	Matn2	chr15	protein_coding	matrilin 2
chr15	34432897	34433236	+	34432897	34433179	A3SS	0.5	50	50	ENSMUST00000163455.9	ENSMUSG00000022324.16	Matn2	chr15	protein_coding	matrilin 2
chr15	34488825	34489778	-	34488825	34495199	A5SS	0.5	50	50	ENSMUST00000022946.6	ENSMUSG00000022323.12	Rida	chr15	protein_coding	reactive intermediate imine deaminase A homolog
chr15	34510165	34512060	+	34510165;34510571	34510478;34512060	ES	0.5	50	50	ENSMUST00000052290.14	ENSMUSG00000022325.15	Pop1	chr15	protein_coding	processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)
chr15	34512997	34515988	+	34512997;34513325	34513236;34515988	ES	0.33	50	50	ENSMUST00000052290.14	ENSMUSG00000022325.15	Pop1	chr15	protein_coding	processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)
chr15	34514477	34515988	+	34513325	34515988	A5SS	0.33	50	50	ENSMUST00000052290.14	ENSMUSG00000022325.15	Pop1	chr15	protein_coding	processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)
chr15	34514477	34515988	+	34512997	34515988	A5SS	0.33	50	50	ENSMUST00000079028.6	ENSMUSG00000022325.15	Pop1	chr15	protein_coding	processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)
chr15	34625177	34650528	-	34625177;34648983	34648812;34650528	ES	0.5	50	50	ENSMUST00000040791.9	ENSMUSG00000038879.9	Nipal2	chr15	protein_coding	NIPA-like domain containing 2
chr15	34578917;34579719	34579513;34582867	-	34578917	34582867	cassetteExon	0.5	100	100	ENSMUST00000040791.9	ENSMUSG00000038879.9	Nipal2	chr15	protein_coding	NIPA-like domain containing 2
chr15	34624665	34625118	-	34609440	34625118	A3SS	0.5	50	50	ENSMUST00000040791.9	ENSMUSG00000038879.9	Nipal2	chr15	protein_coding	NIPA-like domain containing 2
chr15	34838324	34838596	+	34837998	34838596	A5SS	0.5	50	50	ENSMUST00000072868.5	ENSMUSG00000050963.8	Kcns2	chr15	protein_coding	K+ voltage-gated channel, subfamily S, 2
chr15	35115791	35178972	-	35115791	35155673	5pMXE	0.5	50	50	ENSMUST00000018476.14	ENSMUSG00000022329.16	Stk3	chr15	protein_coding	serine/threonine kinase 3
chr15	35114803;35115104	35115084;35115711	-	35114803	35115711	cassetteExon	0.5	100	100	ENSMUST00000018476.14	ENSMUSG00000022329.16	Stk3	chr15	protein_coding	serine/threonine kinase 3
chr15	35099694	35155673	-	35099694	35114675	A5SS&ES	0.5	50	50	ENSMUST00000226555.2	ENSMUSG00000022329.16	Stk3	chr15	protein_coding	serine/threonine kinase 3
chr15	35115791	35155673	-	35099694	35155673	A3SS	0.5	50	50	ENSMUST00000067033.8	ENSMUSG00000022329.16	Stk3	chr15	protein_coding	serine/threonine kinase 3
chr15	35296613	35300335	+	35296613	35296970	3pMXE	0.33	50	50	ENSMUST00000226838.2	ENSMUSG00000022330.6	Osr2	chr15	protein_coding	odd-skipped related 2
chr15	35296613	35302058	+	35296613	35296970	3pMXE	0.33	50	50	ENSMUST00000226838.2	ENSMUSG00000022330.6	Osr2	chr15	protein_coding	odd-skipped related 2
chr15	35296613	35302058	+	35296613	35300335	A3SS	0.33	50	50	ENSMUST00000227655.2	ENSMUSG00000022330.6	Osr2	chr15	protein_coding	odd-skipped related 2
chr15	35302157	35302965	+	35302157	35302883	A3SS	0.5	50	50	ENSMUST00000227655.2	ENSMUSG00000022330.6	Osr2	chr15	protein_coding	odd-skipped related 2
chr15	35296613	35302058	+	35296613;35301101	35300335;35302058	ES	0.5	50	50	ENSMUST00000022952.6	ENSMUSG00000022330.6	Osr2	chr15	protein_coding	odd-skipped related 2
chr15	35301101	35302058	+	35296613	35302058	A5SS	0.5	50	50	ENSMUST00000228684.2	ENSMUSG00000022330.6	Osr2	chr15	protein_coding	odd-skipped related 2
chr15	35307509	35313166	-	35307509;35313096	35312996;35313166	ES	0.5	50	50	ENSMUST00000226642.2	ENSMUSG00000115453.2	BC048602	chr15	lncRNA	cDNA sequence BC048602
chr15	35307509	35308895	-	35307509	35312996	A5SS	0.33	50	50	ENSMUST00000226642.2	ENSMUSG00000115453.2	BC048602	chr15	lncRNA	cDNA sequence BC048602
chr15	35307509	35308895	-	35307509	35313166	A5SS	0.33	50	50	ENSMUST00000226922.2	ENSMUSG00000115453.2	BC048602	chr15	lncRNA	cDNA sequence BC048602
chr15	35372253;35376897	35376775;35379035	+	35372253	35379035	cassetteExon	0.5	100	100	ENSMUST00000048646.9	ENSMUSG00000037646.11	Vps13b	chr15	protein_coding	vacuolar protein sorting 13B
chr15	35417777	35419431	+	35417777	35422454	A3SS	0.5	50	50	ENSMUST00000048646.9	ENSMUSG00000037646.11	Vps13b	chr15	protein_coding	vacuolar protein sorting 13B
chr15	35642610	35642992	+	35642610	35646119	A3SS	0.5	50	50	ENSMUST00000048646.9	ENSMUSG00000037646.11	Vps13b	chr15	protein_coding	vacuolar protein sorting 13B
chr15	35371844	35372079	+	35371923	35372079	A5SS	0.5	50	50	ENSMUST00000048646.9	ENSMUSG00000037646.11	Vps13b	chr15	protein_coding	vacuolar protein sorting 13B
chr15	35937184	35937301	-	35935559	35937301	A3SS	0.5	50	50	ENSMUST00000014457.15	ENSMUSG00000014313.16	Cox6c	chr15	protein_coding	cytochrome c oxidase subunit 6C
chr15	35937430	35937907	-	35937430	35938271	A5SS	0.5	50	50	ENSMUST00000014457.15	ENSMUSG00000014313.16	Cox6c	chr15	protein_coding	cytochrome c oxidase subunit 6C
chr15	36010483	36010888	-	36010483;36010773	36010687;36010888	ES	0.5	50	50	ENSMUST00000172831.8	ENSMUSG00000037627.17	Rgs22	chr15	protein_coding	regulator of G-protein signalling 22
chr15	36081025	36082059	-	36081064	36082059	A3SS	0.5	50	50	ENSMUST00000172831.8	ENSMUSG00000037627.17	Rgs22	chr15	protein_coding	regulator of G-protein signalling 22
chr15	36163258	36164616	-	36163315	36164616	A3SS	0.5	50	50	ENSMUST00000058643.4	ENSMUSG00000048230.7	Fbxo43	chr15	protein_coding	F-box protein 43
chr15	36163315	36164680	-	36163315	36164616	A5SS	0.5	50	50	ENSMUST00000058643.4	ENSMUSG00000048230.7	Fbxo43	chr15	protein_coding	F-box protein 43
chr15	36174359	36175133	+	36174227	36175133	A5SS	0.5	50	50	ENSMUST00000180159.8	ENSMUSG00000045996.13	Polr2k	chr15	protein_coding	polymerase (RNA) II (DNA directed) polypeptide K
chr15	36179728	36181842	+	36178749	36181842	A5SS	0.33	50	50	ENSMUST00000227623.2	ENSMUSG00000037617.13	Spag1	chr15	protein_coding	sperm associated antigen 1
chr15	36179907	36181842	+	36178749	36181842	A5SS	0.33	50	50	ENSMUST00000227623.2	ENSMUSG00000037617.13	Spag1	chr15	protein_coding	sperm associated antigen 1
chr15	36179907	36181842	+	36179728	36181842	A5SS	0.33	50	50	ENSMUST00000047348.11	ENSMUSG00000037617.13	Spag1	chr15	protein_coding	sperm associated antigen 1
chr15	36190369	36190618	+	36186878	36190618	A5SS	0.5	50	50	ENSMUST00000047348.11	ENSMUSG00000037617.13	Spag1	chr15	protein_coding	sperm associated antigen 1
chr15	36245775	36247268	-	36242211	36247268	A3SS	0.5	50	50	ENSMUST00000228358.2	ENSMUSG00000022280.10	Rnf19a	chr15	protein_coding	ring finger protein 19A
chr15	36242211	36244233	-	36242211	36247268	A5SS	0.5	50	50	ENSMUST00000228358.2	ENSMUSG00000022280.10	Rnf19a	chr15	protein_coding	ring finger protein 19A
chr15	36354554	36355071	-	36353854	36355071	A3SS	0.5	50	50	ENSMUST00000226859.2	ENSMUSG00000115715.2	Gm33936	chr15	lncRNA	predicted gene, 33936
chr15	36378482	36382846	-	36378482	36380875	5pMXE	0.5	50	50	ENSMUST00000226470.2	ENSMUSG00000114981.2	Gm34093	chr15	lncRNA	predicted gene, 34093
chr15	36377084	36378377	-	36375602	36378377	A3SS	0.5	50	50	ENSMUST00000226470.2	ENSMUSG00000114981.2	Gm34093	chr15	lncRNA	predicted gene, 34093
chr15	36492351	36496023	-	36486273	36496023	A3SS	0.5	50	50	ENSMUST00000228630.2	ENSMUSG00000048307.9	Ankrd46	chr15	protein_coding	ankyrin repeat domain 46
chr15	36496139	36496486	-	36496139	36496873	A5SS	0.33	50	50	ENSMUST00000228630.2	ENSMUSG00000048307.9	Ankrd46	chr15	protein_coding	ankyrin repeat domain 46
chr15	36496139	36496570	-	36496139	36496873	A5SS	0.33	50	50	ENSMUST00000228630.2	ENSMUSG00000048307.9	Ankrd46	chr15	protein_coding	ankyrin repeat domain 46
chr15	36496139	36496486	-	36496139	36496570	A5SS	0.33	50	50	ENSMUST00000228601.2	ENSMUSG00000048307.9	Ankrd46	chr15	protein_coding	ankyrin repeat domain 46
chr15	36505619	36507845	-	36505616	36507845	A3SS	0.5	50	50	ENSMUST00000013755.12	ENSMUSG00000013611.15	Snx31	chr15	protein_coding	sorting nexin 31
chr15	36545759	36546128	-	36545759	36546926	A5SS	0.5	50	50	ENSMUST00000013755.12	ENSMUSG00000013611.15	Snx31	chr15	protein_coding	sorting nexin 31
chr15	36596343	36596763	-	36596343	36596807	A5SS	0.5	50	50	ENSMUST00000001809.15	ENSMUSG00000022283.16	Pabpc1	chr15	protein_coding	poly(A) binding protein, cytoplasmic 1
chr15	36601653	36602549	-	36601653	36603090	A5SS	0.5	50	50	ENSMUST00000001809.15	ENSMUSG00000022283.16	Pabpc1	chr15	protein_coding	poly(A) binding protein, cytoplasmic 1
chr15	36791232	36794389	-	36791232;36793919	36793723;36794389	ES	0.33	50	50	ENSMUST00000022894.14	ENSMUSG00000022285.18	Ywhaz	chr15	protein_coding	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
chr15	36793922	36794389	-	36793919	36794389	A3SS	0.33	50	50	ENSMUST00000022894.14	ENSMUSG00000022285.18	Ywhaz	chr15	protein_coding	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
chr15	36791232	36792356	-	36791232	36793723	A5SS	0.25	50	50	ENSMUST00000022894.14	ENSMUSG00000022285.18	Ywhaz	chr15	protein_coding	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
chr15	36791232	36793412	-	36791232	36793723	A5SS	0.25	50	50	ENSMUST00000022894.14	ENSMUSG00000022285.18	Ywhaz	chr15	protein_coding	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
chr15	36793919	36794705	-	36793919	36794389	A5SS	0.5	50	50	ENSMUST00000022894.14	ENSMUSG00000022285.18	Ywhaz	chr15	protein_coding	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
chr15	36791232	36797055	-	36791232	36794389	5pMXE	0.2	50	50	ENSMUST00000110361.8	ENSMUSG00000022285.18	Ywhaz	chr15	protein_coding	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
chr15	36791232;36793922	36793723;36794389	-	36791232	36794389	cassetteExon	0.5	100	100	ENSMUST00000110361.8	ENSMUSG00000022285.18	Ywhaz	chr15	protein_coding	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
chr15	36791232	36792356	-	36791232	36794389	A5SS	0.2	50	50	ENSMUST00000110361.8	ENSMUSG00000022285.18	Ywhaz	chr15	protein_coding	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
chr15	36791232	36793412	-	36791232	36794389	A5SS	0.2	50	50	ENSMUST00000110361.8	ENSMUSG00000022285.18	Ywhaz	chr15	protein_coding	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
chr15	36791232	36794389	-	36791232	36793723	5pMXE	0.2	50	50	ENSMUST00000110362.4	ENSMUSG00000022285.18	Ywhaz	chr15	protein_coding	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
chr15	36791232	36797055	-	36791232	36793723	5pMXE	0.2	50	50	ENSMUST00000110362.4	ENSMUSG00000022285.18	Ywhaz	chr15	protein_coding	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
chr15	36791232;36794517	36794389;36797055	-	36791232	36797055	cassetteExon	0.5	100	100	ENSMUST00000226851.2	ENSMUSG00000022285.18	Ywhaz	chr15	protein_coding	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
chr15	36791232	36792356	-	36791232	36797055	A5SS	0.2	50	50	ENSMUST00000226851.2	ENSMUSG00000022285.18	Ywhaz	chr15	protein_coding	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
chr15	36791232	36793412	-	36791232	36797055	A5SS	0.2	50	50	ENSMUST00000226851.2	ENSMUSG00000022285.18	Ywhaz	chr15	protein_coding	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
chr15	36791232	36793412	-	36791232	36792356	5pMXE	0.2	50	50	ENSMUST00000126184.2	ENSMUSG00000022285.18	Ywhaz	chr15	protein_coding	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
chr15	36791232	36794389	-	36793922	36794389	3pMXE	0.33	50	50	ENSMUST00000227067.2	ENSMUSG00000022285.18	Ywhaz	chr15	protein_coding	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
chr15	37004066	37007926	-	37004066	37007372	5pMXE	0.33	50	50	ENSMUST00000078976.9	ENSMUSG00000062397.9	Zfp706	chr15	protein_coding	zinc finger protein 706
chr15	37004066	37007113	-	37004066	37007372	A5SS	0.33	50	50	ENSMUST00000078976.9	ENSMUSG00000062397.9	Zfp706	chr15	protein_coding	zinc finger protein 706
chr15	37004066	37007926	-	37004066	37007113	5pMXE	0.33	50	50	ENSMUST00000226453.2	ENSMUSG00000062397.9	Zfp706	chr15	protein_coding	zinc finger protein 706
chr15	37010114	37018788	+	37007853	37018788	A5SS	0.5	50	50	ENSMUST00000181411.2	ENSMUSG00000097259.3	Gm26766	chr15	lncRNA	predicted gene, 26766
chr15	37233071	37233190	-	37233071	37233509	A5SS	0.33	50	50	ENSMUST00000160264.3	ENSMUSG00000089804.3	Gm16136	chr15	lncRNA	predicted gene 16136
chr15	37233071	37233220	-	37233071	37233509	A5SS	0.33	50	50	ENSMUST00000160264.3	ENSMUSG00000089804.3	Gm16136	chr15	lncRNA	predicted gene 16136
chr15	37233071	37233220	-	37233071	37233190	A5SS	0.33	50	50	ENSMUST00000162520.2	ENSMUSG00000089804.3	Gm16136	chr15	lncRNA	predicted gene 16136
chr15	37328632	37335946	+	37328632	37333504	3pMXE	0.5	50	50	ENSMUST00000161405.8	ENSMUSG00000022286.17	Grhl2	chr15	protein_coding	grainyhead like transcription factor 2
chr15	37233449	37270834	+	37233650	37270834	A5SS	0.5	50	50	ENSMUST00000161405.8	ENSMUSG00000022286.17	Grhl2	chr15	protein_coding	grainyhead like transcription factor 2
chr15	37318775	37328474	+	37310003	37328474	A5SS	0.5	50	50	ENSMUST00000161405.8	ENSMUSG00000022286.17	Grhl2	chr15	protein_coding	grainyhead like transcription factor 2
chr15	37338048	37344900	+	37338048	37344897	A3SS	0.5	50	50	ENSMUST00000022895.15	ENSMUSG00000022286.17	Grhl2	chr15	protein_coding	grainyhead like transcription factor 2
chr15	37358720	37360981	+	37358678	37360981	A5SS	0.5	50	50	ENSMUST00000022895.15	ENSMUSG00000022286.17	Grhl2	chr15	protein_coding	grainyhead like transcription factor 2
chr15	37661330	37792378	-	37661330	37792140	5pMXE	0.25	50	50	ENSMUST00000168992.8	ENSMUSG00000051359.16	Ncald	chr15	protein_coding	neurocalcin delta
chr15	37397697;37448523	37448472;37563635	-	37397697	37563635	cassetteExon	0.5	100	100	ENSMUST00000168992.8	ENSMUSG00000051359.16	Ncald	chr15	protein_coding	neurocalcin delta
chr15	37380777	37397301	-	37372465	37397301	A3SS	0.5	50	50	ENSMUST00000168992.8	ENSMUSG00000051359.16	Ncald	chr15	protein_coding	neurocalcin delta
chr15	37620868	37661276	-	37584749	37661276	A3SS	0.5	50	50	ENSMUST00000168992.8	ENSMUSG00000051359.16	Ncald	chr15	protein_coding	neurocalcin delta
chr15	37397697	37458733	-	37397697	37563635	A5SS	0.25	50	50	ENSMUST00000168992.8	ENSMUSG00000051359.16	Ncald	chr15	protein_coding	neurocalcin delta
chr15	37397697	37459461	-	37397697	37563635	A5SS	0.25	50	50	ENSMUST00000168992.8	ENSMUSG00000051359.16	Ncald	chr15	protein_coding	neurocalcin delta
chr15	37584749	37734525	-	37584749	37661276	A5SS&ES	0.5	50	50	ENSMUST00000168992.8	ENSMUSG00000051359.16	Ncald	chr15	protein_coding	neurocalcin delta
chr15	37661330	37725328	-	37661330	37792140	A5SS	0.25	50	50	ENSMUST00000168992.8	ENSMUSG00000051359.16	Ncald	chr15	protein_coding	neurocalcin delta
chr15	37661330	37734525	-	37661330	37792140	A5SS	0.25	50	50	ENSMUST00000168992.8	ENSMUSG00000051359.16	Ncald	chr15	protein_coding	neurocalcin delta
chr15	37661330	37725328	-	37661330	37792378	A5SS	0.25	50	50	ENSMUST00000090150.11	ENSMUSG00000051359.16	Ncald	chr15	protein_coding	neurocalcin delta
chr15	37661330	37734525	-	37661330	37792378	A5SS	0.25	50	50	ENSMUST00000090150.11	ENSMUSG00000051359.16	Ncald	chr15	protein_coding	neurocalcin delta
chr15	37397697	37459461	-	37397697;37448523	37448472;37459461	ES	0.5	50	50	ENSMUST00000120746.8	ENSMUSG00000051359.16	Ncald	chr15	protein_coding	neurocalcin delta
chr15	37448523	37563635	-	37448523	37459461	5pMXE	0.5	50	50	ENSMUST00000120746.8	ENSMUSG00000051359.16	Ncald	chr15	protein_coding	neurocalcin delta
chr15	37432801	37448472	-	37397697	37448472	A3SS	0.5	50	50	ENSMUST00000120746.8	ENSMUSG00000051359.16	Ncald	chr15	protein_coding	neurocalcin delta
chr15	37397697	37458733	-	37397697	37448472	A5SS&ES	0.33	50	50	ENSMUST00000120746.8	ENSMUSG00000051359.16	Ncald	chr15	protein_coding	neurocalcin delta
chr15	37397697	37792378	-	37397697	37459461	5pMXE	0.2	50	50	ENSMUST00000119730.8	ENSMUSG00000051359.16	Ncald	chr15	protein_coding	neurocalcin delta
chr15	37397697	37458733	-	37397697	37459461	A5SS	0.2	50	50	ENSMUST00000119730.8	ENSMUSG00000051359.16	Ncald	chr15	protein_coding	neurocalcin delta
chr15	37397697	37792378	-	37397697	37458733	5pMXE	0.2	50	50	ENSMUST00000116445.9	ENSMUSG00000051359.16	Ncald	chr15	protein_coding	neurocalcin delta
chr15	37584749;37661330	37661276;37734525	-	37584749	37734525	cassetteExon	0.5	100	100	ENSMUST00000153775.9	ENSMUSG00000051359.16	Ncald	chr15	protein_coding	neurocalcin delta
chr15	37731163	37734525	-	37584749	37734525	A3SS	0.33	50	50	ENSMUST00000153775.9	ENSMUSG00000051359.16	Ncald	chr15	protein_coding	neurocalcin delta
chr15	37661330	37792378	-	37397697	37792378	A3SS	0.5	50	50	ENSMUST00000150453.2	ENSMUSG00000051359.16	Ncald	chr15	protein_coding	neurocalcin delta
chr15	37397697	37448472	-	37397697	37792378	A5SS	0.2	50	50	ENSMUST00000150453.2	ENSMUSG00000051359.16	Ncald	chr15	protein_coding	neurocalcin delta
chr15	37397697	37563635	-	37397697	37792378	A5SS	0.2	50	50	ENSMUST00000150453.2	ENSMUSG00000051359.16	Ncald	chr15	protein_coding	neurocalcin delta
chr15	37731163	37734525	-	37661330	37734525	A3SS	0.5	50	50	ENSMUST00000137944.8	ENSMUSG00000051359.16	Ncald	chr15	protein_coding	neurocalcin delta
chr15	37661330	37725328	-	37661330	37734525	A5SS	0.25	50	50	ENSMUST00000137944.8	ENSMUSG00000051359.16	Ncald	chr15	protein_coding	neurocalcin delta
chr15	37427709	37433170	-	37427709	37432658	5pMXE	0.25	50	50	ENSMUST00000140044.8	ENSMUSG00000086992.8	Gm15941	chr15	lncRNA	predicted gene 15941
chr15	37422880	37432486	-	37422880	37427639	A5SS&ES	0.5	50	50	ENSMUST00000140044.8	ENSMUSG00000086992.8	Gm15941	chr15	lncRNA	predicted gene 15941
chr15	37427709	37429036	-	37427709	37432658	A5SS	0.25	50	50	ENSMUST00000140044.8	ENSMUSG00000086992.8	Gm15941	chr15	lncRNA	predicted gene 15941
chr15	37427709	37431366	-	37427709	37432658	A5SS	0.25	50	50	ENSMUST00000140044.8	ENSMUSG00000086992.8	Gm15941	chr15	lncRNA	predicted gene 15941
chr15	37427709	37431366	-	37427709	37429036	5pMXE	0.25	50	50	ENSMUST00000123777.8	ENSMUSG00000086992.8	Gm15941	chr15	lncRNA	predicted gene 15941
chr15	37427709	37433170	-	37427709	37429036	5pMXE	0.25	50	50	ENSMUST00000123777.8	ENSMUSG00000086992.8	Gm15941	chr15	lncRNA	predicted gene 15941
chr15	37431543	37432486	-	37431543	37432294	5pMXE	0.5	50	50	ENSMUST00000151356.8	ENSMUSG00000086992.8	Gm15941	chr15	lncRNA	predicted gene 15941
chr15	37431543	37432486	-	37422880	37432486	A3SS	0.5	50	50	ENSMUST00000127335.2	ENSMUSG00000086992.8	Gm15941	chr15	lncRNA	predicted gene 15941
chr15	37427709	37431366	-	37427709	37433170	A5SS	0.25	50	50	ENSMUST00000128804.2	ENSMUSG00000086992.8	Gm15941	chr15	lncRNA	predicted gene 15941
chr15	37944836	37946979	-	37944836;37945416	37945283;37946979	ES	0.5	50	50	ENSMUST00000022901.16	ENSMUSG00000022292.17	Rrm2b	chr15	protein_coding	ribonucleotide reductase M2 B (TP53 inducible)
chr15	37947095	37961088	-	37947095;37953998	37953843;37961088	ES	0.33	50	50	ENSMUST00000022901.16	ENSMUSG00000022292.17	Rrm2b	chr15	protein_coding	ribonucleotide reductase M2 B (TP53 inducible)
chr15	37953998	37961462	-	37953998	37961088	5pMXE	0.33	50	50	ENSMUST00000022901.16	ENSMUSG00000022292.17	Rrm2b	chr15	protein_coding	ribonucleotide reductase M2 B (TP53 inducible)
chr15	37929395	37953925	-	37929395	37931846	A5SS&ES	0.5	50	50	ENSMUST00000022901.16	ENSMUSG00000022292.17	Rrm2b	chr15	protein_coding	ribonucleotide reductase M2 B (TP53 inducible)
chr15	37953998	37960697	-	37953998	37961088	A5SS	0.33	50	50	ENSMUST00000022901.16	ENSMUSG00000022292.17	Rrm2b	chr15	protein_coding	ribonucleotide reductase M2 B (TP53 inducible)
chr15	37929395;37953998	37953925;37961088	-	37929395;37947095	37931846;37961088	MXE	0.5	100	100	ENSMUST00000137636.8	ENSMUSG00000022292.17	Rrm2b	chr15	protein_coding	ribonucleotide reductase M2 B (TP53 inducible)
chr15	37929395;37953998	37953925;37961088	-	37929395;37931950	37931846;37961088	MXE	0.5	100	100	ENSMUST00000146821.8	ENSMUSG00000022292.17	Rrm2b	chr15	protein_coding	ribonucleotide reductase M2 B (TP53 inducible)
chr15	37947095	37961088	-	37931950	37961088	A3SS	0.33	50	50	ENSMUST00000146821.8	ENSMUSG00000022292.17	Rrm2b	chr15	protein_coding	ribonucleotide reductase M2 B (TP53 inducible)
chr15	37931950	37937460	-	37931950	37961088	A5SS	0.5	50	50	ENSMUST00000146821.8	ENSMUSG00000022292.17	Rrm2b	chr15	protein_coding	ribonucleotide reductase M2 B (TP53 inducible)
chr15	37947095	37961088	-	37953998	37961088	A3SS&ES	0.33	50	50	ENSMUST00000153481.2	ENSMUSG00000022292.17	Rrm2b	chr15	protein_coding	ribonucleotide reductase M2 B (TP53 inducible)
chr15	37944836	37946979	-	37945416	37946979	3pMXE	0.5	50	50	ENSMUST00000127362.2	ENSMUSG00000022292.17	Rrm2b	chr15	protein_coding	ribonucleotide reductase M2 B (TP53 inducible)
chr15	37947095	37961088	-	37947095	37953843	5pMXE	0.5	50	50	ENSMUST00000127362.2	ENSMUSG00000022292.17	Rrm2b	chr15	protein_coding	ribonucleotide reductase M2 B (TP53 inducible)
chr15	37953998	37961462	-	37953998	37960697	5pMXE	0.33	50	50	ENSMUST00000145175.3	ENSMUSG00000022292.17	Rrm2b	chr15	protein_coding	ribonucleotide reductase M2 B (TP53 inducible)
chr15	37973702	37976304	-	37973702;37975915	37975831;37976304	ES	0.5	50	50	ENSMUST00000228368.2	ENSMUSG00000037487.8	Ubr5	chr15	protein_coding	ubiquitin protein ligase E3 component n-recognin 5
chr15	38038271	38040997	-	38038253	38040997	A3SS	0.5	50	50	ENSMUST00000110336.4	ENSMUSG00000037487.8	Ubr5	chr15	protein_coding	ubiquitin protein ligase E3 component n-recognin 5
chr15	38010021	38011976	-	38010021	38013686	A5SS	0.5	50	50	ENSMUST00000110336.4	ENSMUSG00000037487.8	Ubr5	chr15	protein_coding	ubiquitin protein ligase E3 component n-recognin 5
chr15	37973702	37976304	-	37975915	37976304	A3SS	0.5	50	50	ENSMUST00000226369.2	ENSMUSG00000037487.8	Ubr5	chr15	protein_coding	ubiquitin protein ligase E3 component n-recognin 5
chr15	38300661	38300803	-	38298096	38300803	A3SS	0.5	50	50	ENSMUST00000227920.2	ENSMUSG00000037465.11	Klf10	chr15	protein_coding	Kruppel-like factor 10
chr15	38298096	38299012	-	38298096	38300803	A5SS	0.25	50	50	ENSMUST00000227920.2	ENSMUSG00000037465.11	Klf10	chr15	protein_coding	Kruppel-like factor 10
chr15	38298096	38299303	-	38298096	38300803	A5SS	0.25	50	50	ENSMUST00000227920.2	ENSMUSG00000037465.11	Klf10	chr15	protein_coding	Kruppel-like factor 10
chr15	38298096	38299941	-	38298096	38300803	A5SS	0.25	50	50	ENSMUST00000227920.2	ENSMUSG00000037465.11	Klf10	chr15	protein_coding	Kruppel-like factor 10
chr15	38298096	38299941	-	38298096	38299303	5pMXE	0.25	50	50	ENSMUST00000226363.2	ENSMUSG00000037465.11	Klf10	chr15	protein_coding	Kruppel-like factor 10
chr15	38298096	38299012	-	38298096	38299303	A5SS	0.25	50	50	ENSMUST00000226363.2	ENSMUSG00000037465.11	Klf10	chr15	protein_coding	Kruppel-like factor 10
chr15	38298096	38299941	-	38298096	38299012	5pMXE	0.25	50	50	ENSMUST00000228732.2	ENSMUSG00000037465.11	Klf10	chr15	protein_coding	Kruppel-like factor 10
chr15	38494610	38497508	-	38494610;38495598	38495517;38497508	ES	0.5	50	50	ENSMUST00000065308.13	ENSMUSG00000037458.16	Azin1	chr15	protein_coding	antizyme inhibitor 1
chr15	38501844;38507590	38507431;38514717	-	38501844	38514717	cassetteExon	0.5	100	100	ENSMUST00000065308.13	ENSMUSG00000037458.16	Azin1	chr15	protein_coding	antizyme inhibitor 1
chr15	38514853;38518202	38518061;38519153	-	38514853	38519153	cassetteExon	0.5	100	100	ENSMUST00000065308.13	ENSMUSG00000037458.16	Azin1	chr15	protein_coding	antizyme inhibitor 1
chr15	38492600	38493718	-	38492603	38493718	A3SS	0.5	50	50	ENSMUST00000065308.13	ENSMUSG00000037458.16	Azin1	chr15	protein_coding	antizyme inhibitor 1
chr15	38497794	38498913	-	38497642	38498913	A3SS	0.5	50	50	ENSMUST00000065308.13	ENSMUSG00000037458.16	Azin1	chr15	protein_coding	antizyme inhibitor 1
chr15	38514853	38518341	-	38514853	38519153	A5SS	0.33	50	50	ENSMUST00000065308.13	ENSMUSG00000037458.16	Azin1	chr15	protein_coding	antizyme inhibitor 1
chr15	38514853	38518061	-	38514853	38518341	A5SS	0.33	50	50	ENSMUST00000151319.8	ENSMUSG00000037458.16	Azin1	chr15	protein_coding	antizyme inhibitor 1
chr15	38673264	38676272	+	38673264;38674208	38674141;38676272	ES	0.5	50	50	ENSMUST00000022904.8	ENSMUSG00000022295.9	Atp6v1c1	chr15	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit C1
chr15	38676357	38679564	+	38676357;38677857	38677763;38679564	ES	0.5	50	50	ENSMUST00000022904.8	ENSMUSG00000022295.9	Atp6v1c1	chr15	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit C1
chr15	38662465	38673101	+	38662327	38673101	A5SS	0.5	50	50	ENSMUST00000022904.8	ENSMUSG00000022295.9	Atp6v1c1	chr15	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit C1
chr15	38741006	38812513	+	38741006;38797471	38797305;38812513	ES	0.5	50	50	ENSMUST00000226440.3	ENSMUSG00000022296.11	Baalc	chr15	protein_coding	brain and acute leukemia, cytoplasmic
chr15	38796716	38797305	+	38741006	38797305	A5SS	0.5	50	50	ENSMUST00000226440.3	ENSMUSG00000022296.11	Baalc	chr15	protein_coding	brain and acute leukemia, cytoplasmic
chr15	38870958	38873068	+	38870958	38889061	A3SS	0.33	50	50	ENSMUST00000179165.9	ENSMUSG00000022297.16	Fzd6	chr15	protein_coding	frizzled class receptor 6
chr15	38870958	38873088	+	38870958	38889061	A3SS	0.33	50	50	ENSMUST00000179165.9	ENSMUSG00000022297.16	Fzd6	chr15	protein_coding	frizzled class receptor 6
chr15	38869884	38870620	+	38869827	38870620	A5SS	0.5	50	50	ENSMUST00000179165.9	ENSMUSG00000022297.16	Fzd6	chr15	protein_coding	frizzled class receptor 6
chr15	38870958	38873068	+	38870958	38873088	A3SS	0.5	50	50	ENSMUST00000228491.2	ENSMUSG00000022297.16	Fzd6	chr15	protein_coding	frizzled class receptor 6
chr15	38940554	38947661	+	38940554;38944099	38943878;38947661	ES	0.5	50	50	ENSMUST00000067072.5	ENSMUSG00000054196.8	Cthrc1	chr15	protein_coding	collagen triple helix repeat containing 1
chr15	38944099	38944897	+	38944099	38947661	A3SS	0.5	50	50	ENSMUST00000067072.5	ENSMUSG00000054196.8	Cthrc1	chr15	protein_coding	collagen triple helix repeat containing 1
chr15	38961592	38963268	-	38961637	38963268	A3SS	0.5	50	50	ENSMUST00000022908.10	ENSMUSG00000022299.10	Slc25a32	chr15	protein_coding	solute carrier family 25, member 32
chr15	38965463	38969227	-	38961637	38969227	A3SS	0.5	50	50	ENSMUST00000228160.2	ENSMUSG00000022299.10	Slc25a32	chr15	protein_coding	solute carrier family 25, member 32
chr15	38961637	38963268	-	38961637	38969227	A5SS	0.5	50	50	ENSMUST00000228160.2	ENSMUSG00000022299.10	Slc25a32	chr15	protein_coding	solute carrier family 25, member 32
chr15	39061933	39138371	+	39061933	39101309	3pMXE	0.33	50	50	ENSMUST00000228460.2	ENSMUSG00000037386.17	Rims2	chr15	protein_coding	regulating synaptic membrane exocytosis 2
chr15	39061933	39155497	+	39061933	39101309	3pMXE	0.33	50	50	ENSMUST00000228460.2	ENSMUSG00000037386.17	Rims2	chr15	protein_coding	regulating synaptic membrane exocytosis 2
chr15	39301318	39317756	+	39301318;39315828	39315620;39317756	ES	0.33	50	50	ENSMUST00000082054.12	ENSMUSG00000037386.17	Rims2	chr15	protein_coding	regulating synaptic membrane exocytosis 2
chr15	39301318;39315503	39315436;39317756	+	39301318;39315828	39315620;39317756	MXE	0.5	100	100	ENSMUST00000082054.12	ENSMUSG00000037386.17	Rims2	chr15	protein_coding	regulating synaptic membrane exocytosis 2
chr15	39374770;39398413	39398234;39399268	+	39374770	39399268	cassetteExon	0.5	100	100	ENSMUST00000082054.12	ENSMUSG00000037386.17	Rims2	chr15	protein_coding	regulating synaptic membrane exocytosis 2
chr15	39449158;39450181	39449930;39479665	+	39449158	39479665	cassetteExon	0.5	100	100	ENSMUST00000082054.12	ENSMUSG00000037386.17	Rims2	chr15	protein_coding	regulating synaptic membrane exocytosis 2
chr15	39449158;39473537	39473460;39479665	+	39449158	39479665	cassetteExon	0.5	100	100	ENSMUST00000082054.12	ENSMUSG00000037386.17	Rims2	chr15	protein_coding	regulating synaptic membrane exocytosis 2
chr15	39374770	39381202	+	39374770	39399268	A3SS	0.33	50	50	ENSMUST00000082054.12	ENSMUSG00000037386.17	Rims2	chr15	protein_coding	regulating synaptic membrane exocytosis 2
chr15	39255639	39300393	+	39209016	39300393	A5SS	0.33	50	50	ENSMUST00000082054.12	ENSMUSG00000037386.17	Rims2	chr15	protein_coding	regulating synaptic membrane exocytosis 2
chr15	39298015	39300393	+	39209016	39300393	A5SS	0.33	50	50	ENSMUST00000082054.12	ENSMUSG00000037386.17	Rims2	chr15	protein_coding	regulating synaptic membrane exocytosis 2
chr15	39523322	39538336	+	39479906	39538336	A5SS	0.5	50	50	ENSMUST00000082054.12	ENSMUSG00000037386.17	Rims2	chr15	protein_coding	regulating synaptic membrane exocytosis 2
chr15	39374770;39381267	39381202;39398234	+	39374770	39398234	cassetteExon	0.5	100	100	ENSMUST00000227243.2	ENSMUSG00000037386.17	Rims2	chr15	protein_coding	regulating synaptic membrane exocytosis 2
chr15	39061933	39138371	+	39061933	39155497	A3SS	0.33	50	50	ENSMUST00000227243.2	ENSMUSG00000037386.17	Rims2	chr15	protein_coding	regulating synaptic membrane exocytosis 2
chr15	39138895	39155497	+	39061933	39155497	A5SS	0.5	50	50	ENSMUST00000227243.2	ENSMUSG00000037386.17	Rims2	chr15	protein_coding	regulating synaptic membrane exocytosis 2
chr15	39301318	39317756	+	39301318	39315620	3pMXE	0.33	50	50	ENSMUST00000228839.2	ENSMUSG00000037386.17	Rims2	chr15	protein_coding	regulating synaptic membrane exocytosis 2
chr15	39301318	39315436	+	39301318	39315620	A3SS	0.33	50	50	ENSMUST00000228839.2	ENSMUSG00000037386.17	Rims2	chr15	protein_coding	regulating synaptic membrane exocytosis 2
chr15	39298015	39300393	+	39255639	39300393	A5SS	0.33	50	50	ENSMUST00000228839.2	ENSMUSG00000037386.17	Rims2	chr15	protein_coding	regulating synaptic membrane exocytosis 2
chr15	39301318	39317756	+	39301318;39315503	39315436;39317756	ES	0.33	50	50	ENSMUST00000227381.2	ENSMUSG00000037386.17	Rims2	chr15	protein_coding	regulating synaptic membrane exocytosis 2
chr15	39449158;39450181	39449930;39473460	+	39449158	39473460	cassetteExon	0.5	100	100	ENSMUST00000227381.2	ENSMUSG00000037386.17	Rims2	chr15	protein_coding	regulating synaptic membrane exocytosis 2
chr15	39449158;39450181	39449930;39479665	+	39449158;39473537	39473460;39479665	MXE	0.5	100	100	ENSMUST00000227381.2	ENSMUSG00000037386.17	Rims2	chr15	protein_coding	regulating synaptic membrane exocytosis 2
chr15	39301318;39315828	39315436;39317756	+	39301318	39317756	cassetteExon	0.5	100	100	ENSMUST00000228867.2	ENSMUSG00000037386.17	Rims2	chr15	protein_coding	regulating synaptic membrane exocytosis 2
chr15	39450181;39473537	39473460;39479665	+	39450181	39479665	cassetteExon	0.5	100	100	ENSMUST00000227830.2	ENSMUSG00000037386.17	Rims2	chr15	protein_coding	regulating synaptic membrane exocytosis 2
chr15	39449158	39473460	+	39450181	39473460	5pMXE	0.5	50	50	ENSMUST00000228269.2	ENSMUSG00000037386.17	Rims2	chr15	protein_coding	regulating synaptic membrane exocytosis 2
chr15	39523322	39538336	+	39523322	39535605	3pMXE	0.5	50	50	ENSMUST00000227469.2	ENSMUSG00000037386.17	Rims2	chr15	protein_coding	regulating synaptic membrane exocytosis 2
chr15	39618621	39623725	+	39618621;39623018	39622878;39623725	ES	0.5	50	50	ENSMUST00000227368.2	ENSMUSG00000022303.10	Dcstamp	chr15	protein_coding	dendrocyte expressed seven transmembrane protein
chr15	39609363;39612954	39612716;39617580	+	39609363	39617580	cassetteExon	0.5	100	100	ENSMUST00000227368.2	ENSMUSG00000022303.10	Dcstamp	chr15	protein_coding	dendrocyte expressed seven transmembrane protein
chr15	39618621	39622710	+	39618621	39622878	A3SS	0.33	50	50	ENSMUST00000227368.2	ENSMUSG00000022303.10	Dcstamp	chr15	protein_coding	dendrocyte expressed seven transmembrane protein
chr15	39623018	39623670	+	39623018	39623725	A3SS	0.5	50	50	ENSMUST00000227368.2	ENSMUSG00000022303.10	Dcstamp	chr15	protein_coding	dendrocyte expressed seven transmembrane protein
chr15	39618621;39623018	39622710;39623725	+	39618621	39623725	cassetteExon	0.5	100	100	ENSMUST00000228556.2	ENSMUSG00000022303.10	Dcstamp	chr15	protein_coding	dendrocyte expressed seven transmembrane protein
chr15	39618621	39623725	+	39618621	39622878	A3SS&ES	0.33	50	50	ENSMUST00000227792.2	ENSMUSG00000022303.10	Dcstamp	chr15	protein_coding	dendrocyte expressed seven transmembrane protein
chr15	39646367	39647965	-	39632654	39647965	A3SS	0.33	50	50	ENSMUST00000022915.11	ENSMUSG00000022304.14	Dpys	chr15	protein_coding	dihydropyrimidinase
chr15	39646505	39647965	-	39632654	39647965	A3SS	0.33	50	50	ENSMUST00000022915.11	ENSMUSG00000022304.14	Dpys	chr15	protein_coding	dihydropyrimidinase
chr15	39720133	39720495	-	39710163	39720495	A3SS	0.5	50	50	ENSMUST00000022915.11	ENSMUSG00000022304.14	Dpys	chr15	protein_coding	dihydropyrimidinase
chr15	39646367	39647965	-	39646505	39647965	A3SS	0.33	50	50	ENSMUST00000110306.9	ENSMUSG00000022304.14	Dpys	chr15	protein_coding	dihydropyrimidinase
chr15	39748537	39807000	-	39748537;39767991	39767935;39807000	ES	0.33	50	50	ENSMUST00000022916.13	ENSMUSG00000022305.14	Lrp12	chr15	protein_coding	low density lipoprotein-related protein 12
chr15	39743718	39807000	-	39743718;39748537	39748402;39807000	ES	0.33	50	50	ENSMUST00000110305.3	ENSMUSG00000022305.14	Lrp12	chr15	protein_coding	low density lipoprotein-related protein 12
chr15	39767991	39807000	-	39743718	39807000	A3SS	0.33	50	50	ENSMUST00000228575.2	ENSMUSG00000022305.14	Lrp12	chr15	protein_coding	low density lipoprotein-related protein 12
chr15	39748537	39807000	-	39767991	39807000	3pMXE	0.33	50	50	ENSMUST00000146714.2	ENSMUSG00000022305.14	Lrp12	chr15	protein_coding	low density lipoprotein-related protein 12
chr15	40026221	40028596	+	40026010	40028596	A5SS	0.5	50	50	ENSMUST00000226809.2	ENSMUSG00000115367.2	Gm33301	chr15	lncRNA	predicted gene, 33301
chr15	40529750	40616292	+	40518979	40616292	A5SS	0.5	50	50	ENSMUST00000229777.2	ENSMUSG00000022306.10	Zfpm2	chr15	protein_coding	zinc finger protein, multitype 2
chr15	41689448;41712146	41712066;41713855	+	41689448	41713855	cassetteExon	0.5	100	100	ENSMUST00000090096.11	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41312513	41398966	+	41310985	41398966	A5SS	0.5	50	50	ENSMUST00000090096.11	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41574268	41660870	+	41517057	41660870	A5SS	0.16	50	50	ENSMUST00000090096.11	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41615155	41660870	+	41517057	41660870	A5SS	0.16	50	50	ENSMUST00000090096.11	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41615155	41683235	+	41680662	41683235	A5SS&ES	0.5	50	50	ENSMUST00000090096.11	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41652628	41660870	+	41517057	41660870	A5SS	0.16	50	50	ENSMUST00000090096.11	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41652902	41660870	+	41517057	41660870	A5SS	0.16	50	50	ENSMUST00000090096.11	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41653014	41660870	+	41517057	41660870	A5SS	0.16	50	50	ENSMUST00000090096.11	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41694525	41713855	+	41689448	41713855	A5SS	0.2	50	50	ENSMUST00000090096.11	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41697017	41713855	+	41689448	41713855	A5SS	0.2	50	50	ENSMUST00000090096.11	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41701675	41713855	+	41689448	41713855	A5SS	0.2	50	50	ENSMUST00000090096.11	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41694525	41712066	+	41689448	41712066	A5SS	0.5	50	50	ENSMUST00000110297.10	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41694525	41713855	+	41712146	41713855	A5SS&ES	0.2	50	50	ENSMUST00000110297.10	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41697017	41713855	+	41712146	41713855	A5SS&ES	0.2	50	50	ENSMUST00000110297.10	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41701675	41713855	+	41712146	41713855	A5SS&ES	0.2	50	50	ENSMUST00000110297.10	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41615155	41660870	+	41574268	41660870	A5SS	0.16	50	50	ENSMUST00000229769.2	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41652628	41660870	+	41574268	41660870	A5SS	0.16	50	50	ENSMUST00000229769.2	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41652902	41660870	+	41574268	41660870	A5SS	0.16	50	50	ENSMUST00000229769.2	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41653014	41660870	+	41574268	41660870	A5SS	0.16	50	50	ENSMUST00000229769.2	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41615155	41660870	+	41615155	41683235	A3SS	0.5	50	50	ENSMUST00000229511.2	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41652628	41660870	+	41615155	41660870	A5SS	0.16	50	50	ENSMUST00000229836.2	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41652902	41660870	+	41615155	41660870	A5SS	0.16	50	50	ENSMUST00000229836.2	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41653014	41660870	+	41615155	41660870	A5SS	0.16	50	50	ENSMUST00000229836.2	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41652902	41660870	+	41652628	41660870	A5SS	0.16	50	50	ENSMUST00000170127.9	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41653014	41660870	+	41652628	41660870	A5SS	0.16	50	50	ENSMUST00000170127.9	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41653014	41660870	+	41652902	41660870	A5SS	0.16	50	50	ENSMUST00000230778.2	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41694525;41701675	41701648;41713855	+	41694525	41713855	cassetteExon	0.5	100	100	ENSMUST00000166917.3	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41694525;41712146	41712066;41713855	+	41694525	41713855	cassetteExon	0.5	100	100	ENSMUST00000166917.3	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41697017	41713855	+	41694525	41713855	A5SS	0.2	50	50	ENSMUST00000166917.3	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41694525;41712146	41712066;41713855	+	41694525;41701675	41701648;41713855	MXE	0.5	100	100	ENSMUST00000230127.2	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41697017	41713855	+	41701675	41713855	A5SS&ES	0.25	50	50	ENSMUST00000230127.2	ENSMUSG00000022307.17	Oxr1	chr15	protein_coding	oxidation resistance 1
chr15	41920429	41930471	-	41905133	41930471	A3SS	0.5	50	50	ENSMUST00000229247.2	ENSMUSG00000115986.2	Gm49439	chr15	lncRNA	predicted gene, 49439
chr15	42497646	42539561	-	42387055	42539561	A3SS	0.5	50	50	ENSMUST00000022921.7	ENSMUSG00000022309.10	Angpt1	chr15	protein_coding	angiopoietin 1
chr15	43033391	43033510	-	43033391	43033768	A5SS	0.5	50	50	ENSMUST00000226810.2	ENSMUSG00000051920.8	Rspo2	chr15	protein_coding	R-spondin 2
chr15	43141818;43144624	43144415;43145999	-	43141818	43145999	cassetteExon	0.5	100	100	ENSMUST00000022960.4	ENSMUSG00000022336.4	Eif3e	chr15	protein_coding	eukaryotic translation initiation factor 3, subunit E
chr15	44263620	44264678	-	44263623	44264678	A3SS	0.5	50	50	ENSMUST00000227843.2	ENSMUSG00000038736.11	Nudcd1	chr15	protein_coding	NudC domain containing 1
chr15	44278183	44284115	-	44269388	44284115	A3SS	0.5	50	50	ENSMUST00000227843.2	ENSMUSG00000038736.11	Nudcd1	chr15	protein_coding	NudC domain containing 1
chr15	44284269	44291058	-	44251990	44291058	A3SS	0.5	50	50	ENSMUST00000226606.2	ENSMUSG00000038736.11	Nudcd1	chr15	protein_coding	NudC domain containing 1
chr15	44251990	44259907	-	44251990	44291058	A5SS	0.5	50	50	ENSMUST00000226606.2	ENSMUSG00000038736.11	Nudcd1	chr15	protein_coding	NudC domain containing 1
chr15	44293032;44294190	44294087;44295834	+	44293032	44295834	cassetteExon	0.5	100	100	ENSMUST00000232353.2	ENSMUSG00000022338.9	Eny2	chr15	protein_coding	ENY2 transcription and export complex 2 subunit
chr15	44291566	44292956	+	44291638	44292956	A5SS	0.5	50	50	ENSMUST00000232353.2	ENSMUSG00000022338.9	Eny2	chr15	protein_coding	ENY2 transcription and export complex 2 subunit
chr15	44295904	44297295	+	44295904	44297250	A3SS	0.33	50	50	ENSMUST00000226355.2	ENSMUSG00000022338.9	Eny2	chr15	protein_coding	ENY2 transcription and export complex 2 subunit
chr15	44295904	44297297	+	44295904	44297250	A3SS	0.33	50	50	ENSMUST00000226355.2	ENSMUSG00000022338.9	Eny2	chr15	protein_coding	ENY2 transcription and export complex 2 subunit
chr15	44295904	44297297	+	44295904	44297295	A3SS	0.33	50	50	ENSMUST00000226827.2	ENSMUSG00000022338.9	Eny2	chr15	protein_coding	ENY2 transcription and export complex 2 subunit
chr15	44440195	44441888	+	44438111	44441888	A5SS	0.5	50	50	ENSMUST00000038336.12	ENSMUSG00000038725.14	Pkhd1l1	chr15	protein_coding	polycystic kidney and hepatic disease 1-like 1
chr15	44482956	44487839	+	44482765	44487839	A5SS	0.25	50	50	ENSMUST00000227691.2	ENSMUSG00000022339.10	Ebag9	chr15	protein_coding	estrogen receptor-binding fragment-associated gene 9
chr15	44483303	44487839	+	44482765	44487839	A5SS	0.25	50	50	ENSMUST00000227691.2	ENSMUSG00000022339.10	Ebag9	chr15	protein_coding	estrogen receptor-binding fragment-associated gene 9
chr15	44483338	44487839	+	44482765	44487839	A5SS	0.25	50	50	ENSMUST00000227691.2	ENSMUSG00000022339.10	Ebag9	chr15	protein_coding	estrogen receptor-binding fragment-associated gene 9
chr15	44483303	44487839	+	44482956	44487839	A5SS	0.25	50	50	ENSMUST00000228648.2	ENSMUSG00000022339.10	Ebag9	chr15	protein_coding	estrogen receptor-binding fragment-associated gene 9
chr15	44483338	44487839	+	44482956	44487839	A5SS	0.25	50	50	ENSMUST00000228648.2	ENSMUSG00000022339.10	Ebag9	chr15	protein_coding	estrogen receptor-binding fragment-associated gene 9
chr15	44483338	44487839	+	44483303	44487839	A5SS	0.25	50	50	ENSMUST00000226165.2	ENSMUSG00000022339.10	Ebag9	chr15	protein_coding	estrogen receptor-binding fragment-associated gene 9
chr15	44609858	44611705	-	44609858	44611126	5pMXE	0.5	50	50	ENSMUST00000227081.2	ENSMUSG00000022340.16	Sybu	chr15	protein_coding	syntabulin (syntaxin-interacting)
chr15	44546846;44582381	44582184;44609642	-	44546846	44609642	cassetteExon	0.5	100	100	ENSMUST00000227081.2	ENSMUSG00000022340.16	Sybu	chr15	protein_coding	syntabulin (syntaxin-interacting)
chr15	44611794	44650985	-	44611794	44615483	5pMXE	0.5	50	50	ENSMUST00000110267.9	ENSMUSG00000022340.16	Sybu	chr15	protein_coding	syntabulin (syntaxin-interacting)
chr15	44609855	44611705	-	44609858	44611705	A3SS	0.5	50	50	ENSMUST00000110267.9	ENSMUSG00000022340.16	Sybu	chr15	protein_coding	syntabulin (syntaxin-interacting)
chr15	44628008	44650985	-	44611794	44650985	A3SS	0.33	50	50	ENSMUST00000090057.6	ENSMUSG00000022340.16	Sybu	chr15	protein_coding	syntabulin (syntaxin-interacting)
chr15	44611794	44650985	-	44582381	44650985	A3SS	0.33	50	50	ENSMUST00000226214.2	ENSMUSG00000022340.16	Sybu	chr15	protein_coding	syntabulin (syntaxin-interacting)
chr15	44628008	44650985	-	44582381	44650985	A3SS	0.33	50	50	ENSMUST00000226214.2	ENSMUSG00000022340.16	Sybu	chr15	protein_coding	syntabulin (syntaxin-interacting)
chr15	44546846	44609642	-	44546846	44582184	A5SS&ES	0.5	50	50	ENSMUST00000226214.2	ENSMUSG00000022340.16	Sybu	chr15	protein_coding	syntabulin (syntaxin-interacting)
chr15	44582381	44609642	-	44582381	44650985	A5SS	0.5	50	50	ENSMUST00000226214.2	ENSMUSG00000022340.16	Sybu	chr15	protein_coding	syntabulin (syntaxin-interacting)
chr15	44615760;44630660	44630580;44708909	+	44615760;44703985	44693659;44708909	MXE	0.5	100	100	ENSMUST00000227721.2	ENSMUSG00000060530.3	A930017M01Rik	chr15	transcribed_processed_pseudogene	RIKEN cDNA A930017M01 gene
chr15	44709061	44719860	+	44709061	44735581	A3SS	0.5	50	50	ENSMUST00000227721.2	ENSMUSG00000060530.3	A930017M01Rik	chr15	transcribed_processed_pseudogene	RIKEN cDNA A930017M01 gene
chr15	44652019	44708909	+	44703985	44708909	A5SS&ES	0.33	50	50	ENSMUST00000227721.2	ENSMUSG00000060530.3	A930017M01Rik	chr15	transcribed_processed_pseudogene	RIKEN cDNA A930017M01 gene
chr15	44615760	44693659	+	44615760	44630580	A3SS&ES	0.5	50	50	ENSMUST00000227659.2	ENSMUSG00000060530.3	A930017M01Rik	chr15	transcribed_processed_pseudogene	RIKEN cDNA A930017M01 gene
chr15	44652019	44708909	+	44630660	44708909	A5SS	0.33	50	50	ENSMUST00000227659.2	ENSMUSG00000060530.3	A930017M01Rik	chr15	transcribed_processed_pseudogene	RIKEN cDNA A930017M01 gene
chr15	44703985	44708909	+	44630660	44708909	A5SS	0.33	50	50	ENSMUST00000227659.2	ENSMUSG00000060530.3	A930017M01Rik	chr15	transcribed_processed_pseudogene	RIKEN cDNA A930017M01 gene
chr15	44652019	44708909	+	44652019	44668631	3pMXE	0.5	50	50	ENSMUST00000181839.3	ENSMUSG00000060530.3	A930017M01Rik	chr15	transcribed_processed_pseudogene	RIKEN cDNA A930017M01 gene
chr15	46188515	46200657	+	46188515;46189353	46189008;46200657	ES	0.5	50	50	ENSMUST00000187130.7	ENSMUSG00000099751.7	1700022A22Rik	chr15	lncRNA	RIKEN cDNA 1700022A22 gene
chr15	46217402	46237173	+	46217402;46223288	46223105;46237173	ES	0.5	50	50	ENSMUST00000187130.7	ENSMUSG00000099751.7	1700022A22Rik	chr15	lncRNA	RIKEN cDNA 1700022A22 gene
chr15	46188515	46201920	+	46188515;46200744	46200657;46201920	ES	0.5	50	50	ENSMUST00000185294.7	ENSMUSG00000099751.7	1700022A22Rik	chr15	lncRNA	RIKEN cDNA 1700022A22 gene
chr15	46188515	46189008	+	46188515	46201920	A3SS	0.33	50	50	ENSMUST00000189172.2	ENSMUSG00000099751.7	1700022A22Rik	chr15	lncRNA	RIKEN cDNA 1700022A22 gene
chr15	46305323;46305629	46305530;46316407	-	46305323	46316407	cassetteExon	0.5	100	100	ENSMUST00000227535.2	ENSMUSG00000115177.2	4930523O13Rik	chr15	lncRNA	RIKEN cDNA 4930523O13 gene
chr15	46355715	46359309	-	46355715	46359451	A5SS	0.5	50	50	ENSMUST00000227535.2	ENSMUSG00000115177.2	4930523O13Rik	chr15	lncRNA	RIKEN cDNA 4930523O13 gene
chr15	47521076;47522596	47522402;47523534	-	47521076	47523534	cassetteExon	0.5	100	100	ENSMUST00000160658.8	ENSMUSG00000022311.16	Csmd3	chr15	protein_coding	CUB and Sushi multiple domains 3
chr15	48156251;48177506	48177195;48222694	-	48156251	48222694	cassetteExon	0.5	100	100	ENSMUST00000160658.8	ENSMUSG00000022311.16	Csmd3	chr15	protein_coding	CUB and Sushi multiple domains 3
chr15	48117895	48118921	-	48048768	48118921	A3SS	0.5	50	50	ENSMUST00000160658.8	ENSMUSG00000022311.16	Csmd3	chr15	protein_coding	CUB and Sushi multiple domains 3
chr15	47818447	47824604	-	47818447	47833394	A5SS	0.5	50	50	ENSMUST00000160658.8	ENSMUSG00000022311.16	Csmd3	chr15	protein_coding	CUB and Sushi multiple domains 3
chr15	47619477	47683748	-	47617314	47683748	A3SS	0.5	50	50	ENSMUST00000161653.2	ENSMUSG00000022311.16	Csmd3	chr15	protein_coding	CUB and Sushi multiple domains 3
chr15	47617314	47618782	-	47617314	47683748	A5SS	0.5	50	50	ENSMUST00000161653.2	ENSMUSG00000022311.16	Csmd3	chr15	protein_coding	CUB and Sushi multiple domains 3
chr15	50695354	50753000	-	50695354;50710338	50709410;50753000	ES	0.5	50	50	ENSMUST00000165201.9	ENSMUSG00000038679.17	Trps1	chr15	protein_coding	transcriptional repressor GATA binding 1
chr15	50710338	50753740	-	50710338	50753000	5pMXE	0.25	50	50	ENSMUST00000165201.9	ENSMUSG00000038679.17	Trps1	chr15	protein_coding	transcriptional repressor GATA binding 1
chr15	50528205;50628933	50628901;50685501	-	50528205	50685501	cassetteExon	0.5	100	100	ENSMUST00000165201.9	ENSMUSG00000038679.17	Trps1	chr15	protein_coding	transcriptional repressor GATA binding 1
chr15	50686104	50690682	-	50686104	50694225	A5SS	0.5	50	50	ENSMUST00000165201.9	ENSMUSG00000038679.17	Trps1	chr15	protein_coding	transcriptional repressor GATA binding 1
chr15	50710338	50727279	-	50710338	50753000	A5SS	0.25	50	50	ENSMUST00000165201.9	ENSMUSG00000038679.17	Trps1	chr15	protein_coding	transcriptional repressor GATA binding 1
chr15	50710338	50752338	-	50710338	50753000	A5SS	0.25	50	50	ENSMUST00000165201.9	ENSMUSG00000038679.17	Trps1	chr15	protein_coding	transcriptional repressor GATA binding 1
chr15	50710338	50753000	-	50695354	50753000	A3SS	0.5	50	50	ENSMUST00000184458.8	ENSMUSG00000038679.17	Trps1	chr15	protein_coding	transcriptional repressor GATA binding 1
chr15	50695354	50709410	-	50695354	50753000	A5SS	0.5	50	50	ENSMUST00000184458.8	ENSMUSG00000038679.17	Trps1	chr15	protein_coding	transcriptional repressor GATA binding 1
chr15	50710338	50753740	-	50710338	50752338	5pMXE	0.25	50	50	ENSMUST00000183757.8	ENSMUSG00000038679.17	Trps1	chr15	protein_coding	transcriptional repressor GATA binding 1
chr15	50710338	50727279	-	50710338	50752338	A5SS	0.25	50	50	ENSMUST00000183757.8	ENSMUSG00000038679.17	Trps1	chr15	protein_coding	transcriptional repressor GATA binding 1
chr15	50710338	50727279	-	50710338	50753740	A5SS	0.25	50	50	ENSMUST00000185183.2	ENSMUSG00000038679.17	Trps1	chr15	protein_coding	transcriptional repressor GATA binding 1
chr15	51653509	51661009	-	51653509;51659933	51659784;51661009	ES	0.5	50	50	ENSMUST00000022925.10	ENSMUSG00000022312.12	Eif3h	chr15	protein_coding	eukaryotic translation initiation factor 3, subunit H
chr15	51653509	51653824	-	51653509	51659784	A5SS	0.33	50	50	ENSMUST00000022925.10	ENSMUSG00000022312.12	Eif3h	chr15	protein_coding	eukaryotic translation initiation factor 3, subunit H
chr15	51662755	51699624	-	51662755	51705864	A5SS	0.5	50	50	ENSMUST00000022925.10	ENSMUSG00000022312.12	Eif3h	chr15	protein_coding	eukaryotic translation initiation factor 3, subunit H
chr15	51653509	51661009	-	51653509	51653824	5pMXE	0.33	50	50	ENSMUST00000226756.2	ENSMUSG00000022312.12	Eif3h	chr15	protein_coding	eukaryotic translation initiation factor 3, subunit H
chr15	51741106	51745547	+	51741106;51744586	51744412;51745547	ES	0.5	50	50	ENSMUST00000137116.3	ENSMUSG00000022313.11	Utp23	chr15	protein_coding	UTP23 small subunit processome component
chr15	51741208	51744412	+	51741106	51744412	A5SS	0.5	50	50	ENSMUST00000137116.3	ENSMUSG00000022313.11	Utp23	chr15	protein_coding	UTP23 small subunit processome component
chr15	51846099	51854631	-	51846099	51854943	A5SS	0.5	50	50	ENSMUST00000022927.11	ENSMUSG00000022314.11	Rad21	chr15	protein_coding	RAD21 cohesin complex component
chr15	52576082	52582742	+	52576082	52578525	3pMXE	0.5	50	50	ENSMUST00000228053.2	ENSMUSG00000038622.9	Med30	chr15	protein_coding	mediator complex subunit 30
chr15	52647104	52647992	-	52616251	52647992	A3SS	0.5	50	50	ENSMUST00000228660.2	ENSMUSG00000115137.2	Gm34794	chr15	lncRNA	predicted gene, 34794
chr15	52969530	53208687	-	52969530	52970874	A5SS&ES	0.5	50	50	ENSMUST00000077273.9	ENSMUSG00000061731.10	Ext1	chr15	protein_coding	exostosin glycosyltransferase 1
chr15	52970967	53059535	-	52970967	53207798	A5SS	0.5	50	50	ENSMUST00000077273.9	ENSMUSG00000061731.10	Ext1	chr15	protein_coding	exostosin glycosyltransferase 1
chr15	53521886	53723500	-	53521886;53583140	53583011;53723500	ES	0.33	50	50	ENSMUST00000078673.14	ENSMUSG00000058656.14	Samd12	chr15	protein_coding	sterile alpha motif domain containing 12
chr15	53682446	53723500	-	53583140	53723500	A3SS	0.33	50	50	ENSMUST00000078673.14	ENSMUSG00000058656.14	Samd12	chr15	protein_coding	sterile alpha motif domain containing 12
chr15	53521886	53583041	-	53521886	53583011	A5SS	0.33	50	50	ENSMUST00000078673.14	ENSMUSG00000058656.14	Samd12	chr15	protein_coding	sterile alpha motif domain containing 12
chr15	53723678	53765899	-	53723678	53765765	A5SS	0.5	50	50	ENSMUST00000078673.14	ENSMUSG00000058656.14	Samd12	chr15	protein_coding	sterile alpha motif domain containing 12
chr15	53521886	53723500	-	53521886;53583140	53583041;53723500	ES	0.33	50	50	ENSMUST00000154119.8	ENSMUSG00000058656.14	Samd12	chr15	protein_coding	sterile alpha motif domain containing 12
chr15	53682446	53723500	-	53521886	53723500	A3SS	0.33	50	50	ENSMUST00000132059.2	ENSMUSG00000058656.14	Samd12	chr15	protein_coding	sterile alpha motif domain containing 12
chr15	54783094	54785967	-	54783094	54783325	5pMXE	0.33	50	50	ENSMUST00000041591.16	ENSMUSG00000022425.17	Enpp2	chr15	protein_coding	ectonucleotide pyrophosphatase/phosphodiesterase 2
chr15	54783094	54815944	-	54783094	54783325	5pMXE	0.33	50	50	ENSMUST00000041591.16	ENSMUSG00000022425.17	Enpp2	chr15	protein_coding	ectonucleotide pyrophosphatase/phosphodiesterase 2
chr15	54713523;54714818	54714744;54723439	-	54713523	54723439	cassetteExon	0.5	100	100	ENSMUST00000041591.16	ENSMUSG00000022425.17	Enpp2	chr15	protein_coding	ectonucleotide pyrophosphatase/phosphodiesterase 2
chr15	54739156;54741327	54741172;54745526	-	54739156	54745526	cassetteExon	0.5	100	100	ENSMUST00000041591.16	ENSMUSG00000022425.17	Enpp2	chr15	protein_coding	ectonucleotide pyrophosphatase/phosphodiesterase 2
chr15	54723490	54725906	-	54723490	54725894	A5SS	0.5	50	50	ENSMUST00000041591.16	ENSMUSG00000022425.17	Enpp2	chr15	protein_coding	ectonucleotide pyrophosphatase/phosphodiesterase 2
chr15	54773586	54778032	-	54773586	54782995	A5SS	0.5	50	50	ENSMUST00000041591.16	ENSMUSG00000022425.17	Enpp2	chr15	protein_coding	ectonucleotide pyrophosphatase/phosphodiesterase 2
chr15	54783094	54815944	-	54783094	54785967	5pMXE	0.33	50	50	ENSMUST00000228222.2	ENSMUSG00000022425.17	Enpp2	chr15	protein_coding	ectonucleotide pyrophosphatase/phosphodiesterase 2
chr15	54846575	54850164	-	54846575	54849562	A5SS	0.5	50	50	ENSMUST00000227127.2	ENSMUSG00000115245.2	4930478E11Rik	chr15	lncRNA	RIKEN cDNA 4930478E11 gene
chr15	54903793	54906505	-	54903869	54906505	A3SS	0.5	50	50	ENSMUST00000041733.9	ENSMUSG00000037343.9	Taf2	chr15	protein_coding	TATA-box binding protein associated factor 2
chr15	54885720	54886063	-	54885720	54890568	A5SS	0.33	50	50	ENSMUST00000041733.9	ENSMUSG00000037343.9	Taf2	chr15	protein_coding	TATA-box binding protein associated factor 2
chr15	54885720	54886201	-	54885720	54890568	A5SS	0.33	50	50	ENSMUST00000041733.9	ENSMUSG00000037343.9	Taf2	chr15	protein_coding	TATA-box binding protein associated factor 2
chr15	54909384	54910799	-	54909384	54910814	A5SS	0.5	50	50	ENSMUST00000041733.9	ENSMUSG00000037343.9	Taf2	chr15	protein_coding	TATA-box binding protein associated factor 2
chr15	54885720	54886063	-	54885720	54886201	A5SS	0.33	50	50	ENSMUST00000228345.2	ENSMUSG00000037343.9	Taf2	chr15	protein_coding	TATA-box binding protein associated factor 2
chr15	54946494;54946989	54946801;54947445	-	54946494	54947445	cassetteExon	0.5	100	100	ENSMUST00000023059.13	ENSMUSG00000022422.14	Dscc1	chr15	protein_coding	DNA replication and sister chromatid cohesion 1
chr15	54975088	54975739	-	54974612	54975739	A3SS	0.33	50	50	ENSMUST00000110230.8	ENSMUSG00000053749.13	Gm9920	chr15	lncRNA	predicted gene 9920
chr15	54974612	54975739	-	54963588	54975739	A3SS	0.33	50	50	ENSMUST00000100659.3	ENSMUSG00000053749.13	Gm9920	chr15	lncRNA	predicted gene 9920
chr15	54975088	54975739	-	54963588	54975739	A3SS	0.33	50	50	ENSMUST00000100659.3	ENSMUSG00000053749.13	Gm9920	chr15	lncRNA	predicted gene 9920
chr15	54963588	54972309	-	54963588	54975739	A5SS	0.5	50	50	ENSMUST00000100659.3	ENSMUSG00000053749.13	Gm9920	chr15	lncRNA	predicted gene 9920
chr15	55012915	55015236	+	55012915	55015184	A3SS	0.5	50	50	ENSMUST00000096433.10	ENSMUSG00000022419.17	Deptor	chr15	protein_coding	DEP domain containing MTOR-interacting protein
chr15	55081669	55083535	+	55081669	55115403	A3SS	0.5	50	50	ENSMUST00000096433.10	ENSMUSG00000022419.17	Deptor	chr15	protein_coding	DEP domain containing MTOR-interacting protein
chr15	54996956	55012737	+	54976015	55012737	A5SS	0.5	50	50	ENSMUST00000096433.10	ENSMUSG00000022419.17	Deptor	chr15	protein_coding	DEP domain containing MTOR-interacting protein
chr15	55275117	55282081	+	55275117	55282084	A3SS	0.5	50	50	ENSMUST00000023053.12	ENSMUSG00000022371.17	Col14a1	chr15	protein_coding	collagen, type XIV, alpha 1
chr15	55381733	55382533	+	55381733	55383329	A3SS	0.5	50	50	ENSMUST00000023053.12	ENSMUSG00000022371.17	Col14a1	chr15	protein_coding	collagen, type XIV, alpha 1
chr15	55275108	55282084	+	55275117	55282084	A5SS	0.5	50	50	ENSMUST00000023053.12	ENSMUSG00000022371.17	Col14a1	chr15	protein_coding	collagen, type XIV, alpha 1
chr15	55342053	55342557	-	55339060	55342557	A3SS	0.5	50	50	ENSMUST00000228551.2	ENSMUSG00000115414.2	Gm49257	chr15	lncRNA	predicted gene, 49257
chr15	55406780;55411631	55411538;55418716	-	55406780	55418716	cassetteExon	0.5	100	100	ENSMUST00000164542.8	ENSMUSG00000022370.14	Mrpl13	chr15	protein_coding	mitochondrial ribosomal protein L13
chr15	55406780	55418716	-	55406780	55411538	5pMXE	0.5	50	50	ENSMUST00000165356.2	ENSMUSG00000022370.14	Mrpl13	chr15	protein_coding	mitochondrial ribosomal protein L13
chr15	55421977	55426333	+	55421977;55426172	55426099;55426333	ES	0.5	50	50	ENSMUST00000022998.14	ENSMUSG00000022369.14	Mtbp	chr15	protein_coding	Mdm2, transformed 3T3 cell double minute p53 binding protein
chr15	55470195	55472903	+	55470195	55474334	A3SS	0.5	50	50	ENSMUST00000022998.14	ENSMUSG00000022369.14	Mtbp	chr15	protein_coding	Mdm2, transformed 3T3 cell double minute p53 binding protein
chr15	55486158	55488787	+	55484132	55488787	A5SS	0.5	50	50	ENSMUST00000022998.14	ENSMUSG00000022369.14	Mtbp	chr15	protein_coding	Mdm2, transformed 3T3 cell double minute p53 binding protein
chr15	55654668	55655430	-	55612791	55655430	A3SS	0.5	50	50	ENSMUST00000039769.13	ENSMUSG00000060429.13	Sntb1	chr15	protein_coding	syntrophin, basic 1
chr15	56557473	56621758	+	56557473	56557759	3pMXE	0.33	50	50	ENSMUST00000125401.8	ENSMUSG00000086541.9	Has2os	chr15	lncRNA	hyaluronan synthase 2, opposite strand
chr15	56557473	56641124	+	56557473	56557759	3pMXE	0.33	50	50	ENSMUST00000125401.8	ENSMUSG00000086541.9	Has2os	chr15	lncRNA	hyaluronan synthase 2, opposite strand
chr15	56557473;56621878	56621758;56641124	+	56557473	56641124	cassetteExon	0.5	100	100	ENSMUST00000166290.2	ENSMUSG00000086541.9	Has2os	chr15	lncRNA	hyaluronan synthase 2, opposite strand
chr15	56629826	56641124	+	56557473	56641124	A5SS	0.33	50	50	ENSMUST00000166290.2	ENSMUSG00000086541.9	Has2os	chr15	lncRNA	hyaluronan synthase 2, opposite strand
chr15	56629826	56641124	+	56621878	56641124	A5SS	0.33	50	50	ENSMUST00000163314.2	ENSMUSG00000086541.9	Has2os	chr15	lncRNA	hyaluronan synthase 2, opposite strand
chr15	57127084	57339645	-	57127084	57128490	5pMXE	0.5	50	50	ENSMUST00000022995.13	ENSMUSG00000022366.13	Slc22a22	chr15	protein_coding	solute carrier family 22 (organic cation transporter), member 22
chr15	57127036	57128490	-	57127084	57128490	A3SS	0.5	50	50	ENSMUST00000022995.13	ENSMUSG00000022366.13	Slc22a22	chr15	protein_coding	solute carrier family 22 (organic cation transporter), member 22
chr15	57559182	57626042	+	57558400	57626042	A5SS	0.5	50	50	ENSMUST00000096430.11	ENSMUSG00000071757.11	Zhx2	chr15	protein_coding	zinc fingers and homeoboxes 2
chr15	57743460;57745629	57745530;57746831	-	57743460	57746831	cassetteExon	0.5	100	100	ENSMUST00000022993.7	ENSMUSG00000022365.7	Derl1	chr15	protein_coding	Der1-like domain family, member 1
chr15	57746942	57753738	-	57746942	57755539	A5SS	0.5	50	50	ENSMUST00000022993.7	ENSMUSG00000022365.7	Derl1	chr15	protein_coding	Der1-like domain family, member 1
chr15	57779512	57786353	+	57779512;57783442	57783327;57786353	ES	0.5	50	50	ENSMUST00000022992.13	ENSMUSG00000022364.15	Tbc1d31	chr15	protein_coding	TBC1 domain family, member 31
chr15	57775787;57777366	57777251;57779366	+	57775787	57779366	cassetteExon	0.5	100	100	ENSMUST00000022992.13	ENSMUSG00000022364.15	Tbc1d31	chr15	protein_coding	TBC1 domain family, member 31
chr15	57824379;57825659	57825465;57827200	+	57824379	57827200	cassetteExon	0.5	100	100	ENSMUST00000022992.13	ENSMUSG00000022364.15	Tbc1d31	chr15	protein_coding	TBC1 domain family, member 31
chr15	57821825	57821911	+	57821825	57824239	A3SS	0.5	50	50	ENSMUST00000022992.13	ENSMUSG00000022364.15	Tbc1d31	chr15	protein_coding	TBC1 domain family, member 31
chr15	57776508	57779366	+	57775787	57779366	A5SS	0.33	50	50	ENSMUST00000022992.13	ENSMUSG00000022364.15	Tbc1d31	chr15	protein_coding	TBC1 domain family, member 31
chr15	57779512	57786353	+	57779512	57783327	3pMXE	0.5	50	50	ENSMUST00000159775.8	ENSMUSG00000022364.15	Tbc1d31	chr15	protein_coding	TBC1 domain family, member 31
chr15	57776508	57779366	+	57777366	57779366	A5SS&ES	0.33	50	50	ENSMUST00000159775.8	ENSMUSG00000022364.15	Tbc1d31	chr15	protein_coding	TBC1 domain family, member 31
chr15	57775787	57779366	+	57777366	57779366	5pMXE	0.33	50	50	ENSMUST00000160098.8	ENSMUSG00000022364.15	Tbc1d31	chr15	protein_coding	TBC1 domain family, member 31
chr15	57865572	57872946	+	57858734	57872946	A5SS	0.5	50	50	ENSMUST00000160942.8	ENSMUSG00000051225.10	Fam83a	chr15	protein_coding	family with sequence similarity 83, member A
chr15	57894496	57897480	-	57894496;57895475	57895380;57897480	ES	0.33	50	50	ENSMUST00000100655.5	ENSMUSG00000101892.2	9130401M01Rik	chr15	protein_coding	RIKEN cDNA 9130401M01 gene
chr15	57895475	57932715	-	57895475	57897480	5pMXE	0.5	50	50	ENSMUST00000100655.5	ENSMUSG00000101892.2	9130401M01Rik	chr15	protein_coding	RIKEN cDNA 9130401M01 gene
chr15	57895544	57897480	-	57895475	57897480	A3SS	0.33	50	50	ENSMUST00000100655.5	ENSMUSG00000101892.2	9130401M01Rik	chr15	protein_coding	RIKEN cDNA 9130401M01 gene
chr15	57894496	57897480	-	57894496;57895544	57895380;57897480	ES	0.33	50	50	ENSMUST00000189159.2	ENSMUSG00000101892.2	9130401M01Rik	chr15	protein_coding	RIKEN cDNA 9130401M01 gene
chr15	57894496	57932715	-	57894496	57897480	5pMXE	0.33	50	50	ENSMUST00000185553.2	ENSMUSG00000101892.2	9130401M01Rik	chr15	protein_coding	RIKEN cDNA 9130401M01 gene
chr15	57894496;57895475	57895380;57932715	-	57894496	57932715	cassetteExon	0.5	100	100	ENSMUST00000176935.8	ENSMUSG00000022362.14	Gm29394	chr15	protein_coding	predicted gene 29394
chr15	57912181	57932715	-	57894496	57932715	A3SS	0.2	50	50	ENSMUST00000176935.8	ENSMUSG00000022362.14	Gm29394	chr15	protein_coding	predicted gene 29394
chr15	57918478	57932715	-	57894496	57932715	A3SS	0.2	50	50	ENSMUST00000176935.8	ENSMUSG00000022362.14	Gm29394	chr15	protein_coding	predicted gene 29394
chr15	57927576	57932715	-	57894496	57932715	A3SS	0.2	50	50	ENSMUST00000176935.8	ENSMUSG00000022362.14	Gm29394	chr15	protein_coding	predicted gene 29394
chr15	57932825	57939482	-	57932825	57939553	A5SS	0.5	50	50	ENSMUST00000176935.8	ENSMUSG00000022362.14	Gm29394	chr15	protein_coding	predicted gene 29394
chr15	57912181	57932715	-	57895475	57932715	A3SS	0.2	50	50	ENSMUST00000177176.8	ENSMUSG00000022362.14	Gm29394	chr15	protein_coding	predicted gene 29394
chr15	57918478	57932715	-	57895475	57932715	A3SS	0.2	50	50	ENSMUST00000177176.8	ENSMUSG00000022362.14	Gm29394	chr15	protein_coding	predicted gene 29394
chr15	57927576	57932715	-	57895475	57932715	A3SS	0.2	50	50	ENSMUST00000177176.8	ENSMUSG00000022362.14	Gm29394	chr15	protein_coding	predicted gene 29394
chr15	57894496	57897480	-	57894496	57895380	A5SS&ES	0.33	50	50	ENSMUST00000177176.8	ENSMUSG00000022362.14	Gm29394	chr15	protein_coding	predicted gene 29394
chr15	57918478	57932715	-	57912181	57932715	A3SS	0.2	50	50	ENSMUST00000177504.9	ENSMUSG00000022362.14	Gm29394	chr15	protein_coding	predicted gene 29394
chr15	57927576	57932715	-	57912181	57932715	A3SS	0.2	50	50	ENSMUST00000177504.9	ENSMUSG00000022362.14	Gm29394	chr15	protein_coding	predicted gene 29394
chr15	57912181	57915620	-	57912181	57932715	A5SS	0.5	50	50	ENSMUST00000177504.9	ENSMUSG00000022362.14	Gm29394	chr15	protein_coding	predicted gene 29394
chr15	57918478	57932715	-	57918478;57927576	57927451;57932715	ES	0.33	50	50	ENSMUST00000110168.8	ENSMUSG00000022361.15	Zhx1	chr15	protein_coding	zinc fingers and homeoboxes 1
chr15	57912181	57932715	-	57912181;57918478	57915620;57932715	ES	0.33	50	50	ENSMUST00000070143.13	ENSMUSG00000022361.15	Zhx1	chr15	protein_coding	zinc fingers and homeoboxes 1
chr15	57981845	57982469	-	57981845	57984338	A5SS	0.5	50	50	ENSMUST00000038194.5	ENSMUSG00000022360.9	Atad2	chr15	protein_coding	ATPase family, AAA domain containing 2
chr15	58014052	58016976	+	58014052;58016141	58015993;58016976	ES	0.5	50	50	ENSMUST00000067563.9	ENSMUSG00000022359.11	Wdyhv1	chr15	protein_coding	WDYHV motif containing 1
chr15	58014052	58014378	+	58014052	58015993	A3SS	0.25	50	50	ENSMUST00000067563.9	ENSMUSG00000022359.11	Wdyhv1	chr15	protein_coding	WDYHV motif containing 1
chr15	58017100	58018535	+	58017100	58021298	A3SS	0.5	50	50	ENSMUST00000067563.9	ENSMUSG00000022359.11	Wdyhv1	chr15	protein_coding	WDYHV motif containing 1
chr15	58011837	58014002	+	58011829	58014002	A5SS	0.5	50	50	ENSMUST00000067563.9	ENSMUSG00000022359.11	Wdyhv1	chr15	protein_coding	WDYHV motif containing 1
chr15	58014052	58021298	+	58014052;58017100	58016976;58021298	ES	0.5	50	50	ENSMUST00000228761.2	ENSMUSG00000022359.11	Wdyhv1	chr15	protein_coding	WDYHV motif containing 1
chr15	58014052	58014378	+	58014052	58016976	A3SS	0.25	50	50	ENSMUST00000228761.2	ENSMUSG00000022359.11	Wdyhv1	chr15	protein_coding	WDYHV motif containing 1
chr15	58014052	58014378	+	58014052	58021298	A3SS	0.25	50	50	ENSMUST00000226955.2	ENSMUSG00000022359.11	Wdyhv1	chr15	protein_coding	WDYHV motif containing 1
chr15	58014052	58015993	+	58014052	58021298	A3SS	0.25	50	50	ENSMUST00000226955.2	ENSMUSG00000022359.11	Wdyhv1	chr15	protein_coding	WDYHV motif containing 1
chr15	58014052	58021298	+	58017100	58021298	5pMXE	0.5	50	50	ENSMUST00000227615.2	ENSMUSG00000022359.11	Wdyhv1	chr15	protein_coding	WDYHV motif containing 1
chr15	58510407	58511938	+	58509942	58511938	A5SS	0.5	50	50	ENSMUST00000161028.2	ENSMUSG00000037106.9	Fer1l6	chr15	protein_coding	fer-1-like 6 (C. elegans)
chr15	58761343	58808117	+	58761343	58770158	3pMXE	0.5	50	50	ENSMUST00000036904.7	ENSMUSG00000037075.8	Rnf139	chr15	protein_coding	ring finger protein 139
chr15	58805787	58808117	+	58761343	58808117	A5SS	0.5	50	50	ENSMUST00000228787.2	ENSMUSG00000115463.2	Gm49356	chr15	protein_coding	predicted gene, 49356
chr15	58777660	58788001	-	58777660;58781498	58781422;58788001	ES	0.5	50	50	ENSMUST00000110155.3	ENSMUSG00000050891.11	Tatdn1	chr15	protein_coding	TatD DNase domain containing 1
chr15	58788041	58792989	-	58788041;58788211	58788126;58792989	ES	0.5	50	50	ENSMUST00000110155.3	ENSMUSG00000050891.11	Tatdn1	chr15	protein_coding	TatD DNase domain containing 1
chr15	58793266	58798285	-	58793266;58795817	58795754;58798285	ES	0.5	50	50	ENSMUST00000110155.3	ENSMUSG00000050891.11	Tatdn1	chr15	protein_coding	TatD DNase domain containing 1
chr15	58800598;58802880	58802761;58805528	-	58800598	58805528	cassetteExon	0.5	100	100	ENSMUST00000110155.3	ENSMUSG00000050891.11	Tatdn1	chr15	protein_coding	TatD DNase domain containing 1
chr15	58772919	58776583	-	58762546	58776583	A3SS	0.33	50	50	ENSMUST00000110155.3	ENSMUSG00000050891.11	Tatdn1	chr15	protein_coding	TatD DNase domain containing 1
chr15	58776270	58776583	-	58762546	58776583	A3SS	0.33	50	50	ENSMUST00000110155.3	ENSMUSG00000050891.11	Tatdn1	chr15	protein_coding	TatD DNase domain containing 1
chr15	58793266	58795678	-	58793266	58795754	A5SS	0.33	50	50	ENSMUST00000110155.3	ENSMUSG00000050891.11	Tatdn1	chr15	protein_coding	TatD DNase domain containing 1
chr15	58798334	58800393	-	58798334	58800533	A5SS	0.5	50	50	ENSMUST00000110155.3	ENSMUSG00000050891.11	Tatdn1	chr15	protein_coding	TatD DNase domain containing 1
chr15	58800598	58805132	-	58800598	58805528	A5SS	0.33	50	50	ENSMUST00000110155.3	ENSMUSG00000050891.11	Tatdn1	chr15	protein_coding	TatD DNase domain containing 1
chr15	58772919;58776270	58776129;58776583	-	58772919	58776583	cassetteExon	0.5	100	100	ENSMUST00000227540.2	ENSMUSG00000050891.11	Tatdn1	chr15	protein_coding	TatD DNase domain containing 1
chr15	58793266;58795817	58795678;58798285	-	58793266	58798285	cassetteExon	0.5	100	100	ENSMUST00000227540.2	ENSMUSG00000050891.11	Tatdn1	chr15	protein_coding	TatD DNase domain containing 1
chr15	58777660	58788001	-	58781498	58788001	3pMXE	0.5	50	50	ENSMUST00000226835.2	ENSMUSG00000050891.11	Tatdn1	chr15	protein_coding	TatD DNase domain containing 1
chr15	58788041	58792989	-	58788211	58792989	3pMXE	0.5	50	50	ENSMUST00000226505.2	ENSMUSG00000050891.11	Tatdn1	chr15	protein_coding	TatD DNase domain containing 1
chr15	58800598	58802761	-	58800598	58805132	A5SS	0.33	50	50	ENSMUST00000226505.2	ENSMUSG00000050891.11	Tatdn1	chr15	protein_coding	TatD DNase domain containing 1
chr15	58817868	58823319	-	58817868;58819369	58819175;58823319	ES	0.33	50	50	ENSMUST00000080371.8	ENSMUSG00000022353.11	Mtss1	chr15	protein_coding	MTSS I-BAR domain containing 1
chr15	58828439	58840688	-	58828439;58836357	58836346;58840688	ES	0.5	50	50	ENSMUST00000080371.8	ENSMUSG00000022353.11	Mtss1	chr15	protein_coding	MTSS I-BAR domain containing 1
chr15	58817868;58820291	58820172;58823319	-	58817868;58819369	58819175;58823319	MXE	0.5	100	100	ENSMUST00000080371.8	ENSMUSG00000022353.11	Mtss1	chr15	protein_coding	MTSS I-BAR domain containing 1
chr15	58819369;58820291	58820172;58823319	-	58819369	58823319	cassetteExon	0.5	100	100	ENSMUST00000080371.8	ENSMUSG00000022353.11	Mtss1	chr15	protein_coding	MTSS I-BAR domain containing 1
chr15	58828439	58828624	-	58828439	58836346	A5SS	0.25	50	50	ENSMUST00000080371.8	ENSMUSG00000022353.11	Mtss1	chr15	protein_coding	MTSS I-BAR domain containing 1
chr15	58828439	58840677	-	58828439	58836346	A5SS&ES	0.25	50	50	ENSMUST00000080371.8	ENSMUSG00000022353.11	Mtss1	chr15	protein_coding	MTSS I-BAR domain containing 1
chr15	58844409	58912347	-	58844409	58926867	A5SS	0.5	50	50	ENSMUST00000080371.8	ENSMUSG00000022353.11	Mtss1	chr15	protein_coding	MTSS I-BAR domain containing 1
chr15	58828439	58840677	-	58828439	58828624	5pMXE	0.25	50	50	ENSMUST00000226393.2	ENSMUSG00000022353.11	Mtss1	chr15	protein_coding	MTSS I-BAR domain containing 1
chr15	58828439	58840688	-	58828439	58828624	5pMXE	0.25	50	50	ENSMUST00000226393.2	ENSMUSG00000022353.11	Mtss1	chr15	protein_coding	MTSS I-BAR domain containing 1
chr15	58828439	58840688	-	58828439	58840677	A5SS	0.25	50	50	ENSMUST00000226976.2	ENSMUSG00000022353.11	Mtss1	chr15	protein_coding	MTSS I-BAR domain containing 1
chr15	58817868;58820291	58820172;58823319	-	58817868	58823319	cassetteExon	0.5	100	100	ENSMUST00000227045.2	ENSMUSG00000022353.11	Mtss1	chr15	protein_coding	MTSS I-BAR domain containing 1
chr15	58817868	58820172	-	58817868;58819369	58819175;58820172	ES	0.5	50	50	ENSMUST00000227196.2	ENSMUSG00000022353.11	Mtss1	chr15	protein_coding	MTSS I-BAR domain containing 1
chr15	58817868	58823319	-	58819369	58823319	3pMXE	0.33	50	50	ENSMUST00000227290.2	ENSMUSG00000022353.11	Mtss1	chr15	protein_coding	MTSS I-BAR domain containing 1
chr15	59195827	59197884	+	59195827;59196406	59196311;59197884	ES	0.5	50	50	ENSMUST00000162142.2	ENSMUSG00000022351.15	Sqle	chr15	protein_coding	squalene epoxidase
chr15	59193343	59194685	+	59193343	59194716	A3SS	0.5	50	50	ENSMUST00000162142.2	ENSMUSG00000022351.15	Sqle	chr15	protein_coding	squalene epoxidase
chr15	59223433	59224350	-	59223433	59224139	A5SS	0.5	50	50	ENSMUST00000227725.2	ENSMUSG00000022350.8	Washc5	chr15	protein_coding	WASH complex subunit 5
chr15	59327315	59463546	+	59327315	59409376	3pMXE	0.33	50	50	ENSMUST00000168722.3	ENSMUSG00000059586.11	Nsmce2	chr15	protein_coding	NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase
chr15	59327315	59368626	+	59327315	59409376	A3SS	0.33	50	50	ENSMUST00000168722.3	ENSMUSG00000059586.11	Nsmce2	chr15	protein_coding	NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase
chr15	59327315	59463546	+	59327315;59368703	59368626;59463546	ES	0.5	50	50	ENSMUST00000227173.2	ENSMUSG00000059586.11	Nsmce2	chr15	protein_coding	NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase
chr15	60017318	60058934	-	60037593	60058934	A3SS&ES	0.33	50	50	ENSMUST00000227875.2	ENSMUSG00000115681.2	Gm2682	chr15	lncRNA	predicted gene 2682
chr15	60017318	60058934	-	60000151	60058934	A3SS	0.33	50	50	ENSMUST00000226854.2	ENSMUSG00000115681.2	Gm2682	chr15	lncRNA	predicted gene 2682
chr15	60037593	60058934	-	60000151	60058934	A3SS	0.33	50	50	ENSMUST00000226854.2	ENSMUSG00000115681.2	Gm2682	chr15	lncRNA	predicted gene 2682
chr15	60000151	60036259	-	60000151	60058934	A5SS	0.5	50	50	ENSMUST00000226854.2	ENSMUSG00000115681.2	Gm2682	chr15	lncRNA	predicted gene 2682
chr15	60017318	60018950	-	60017318	60058934	A5SS	0.5	50	50	ENSMUST00000227412.2	ENSMUSG00000115681.2	Gm2682	chr15	lncRNA	predicted gene 2682
chr15	60617321	60618223	+	60617321	60618085	A3SS	0.5	50	50	ENSMUST00000219083.3	ENSMUSG00000112930.3	Gm7086	chr15	transcribed_unprocessed_pseudogene	predicted pseudogene 7086
chr15	60696632	60699970	+	60696632;60699211	60699181;60699970	ES	0.5	50	50	ENSMUST00000180730.3	ENSMUSG00000097493.4	9930014A18Rik	chr15	lncRNA	RIKEN cDNA 9930014A18 gene
chr15	60790000	60790729	-	60768872	60790729	A3SS	0.5	50	50	ENSMUST00000228881.2	ENSMUSG00000022347.9	A1bg	chr15	protein_coding	alpha-1-B glycoprotein
chr15	61194466	61265501	+	61194466	61202889	3pMXE	0.5	50	50	ENSMUST00000230678.2	ENSMUSG00000116299.2	Gm29904	chr15	lncRNA	predicted gene, 29904
chr15	61409773	61581310	-	61409773	61415968	5pMXE	0.5	50	50	ENSMUST00000229194.2	ENSMUSG00000116109.2	Gm49498	chr15	lncRNA	predicted gene, 49498
chr15	61572871	61581310	-	61409773	61581310	A3SS	0.5	50	50	ENSMUST00000229538.2	ENSMUSG00000116031.2	D030024E09Rik	chr15	lncRNA	RIKEN cDNA D030024E09 gene
chr15	61582717	61610927	-	61582717	61644656	A5SS	0.5	50	50	ENSMUST00000230725.2	ENSMUSG00000116031.2	D030024E09Rik	chr15	lncRNA	RIKEN cDNA D030024E09 gene
chr15	61857800	61859359	+	61857800	61859356	A3SS	0.5	50	50	ENSMUST00000161976.8	ENSMUSG00000022346.18	Myc	chr15	protein_coding	myelocytomatosis oncogene
chr15	61859152	61859356	+	61857800	61859356	A5SS	0.5	50	50	ENSMUST00000161976.8	ENSMUSG00000022346.18	Myc	chr15	protein_coding	myelocytomatosis oncogene
chr15	61910050	62047316	+	61910050;61979314	61978997;62047316	ES	0.25	50	50	ENSMUST00000182956.8	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	62047397	62114023	+	62047397;62047775	62047677;62114023	ES	0.16	50	50	ENSMUST00000182956.8	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	62114410	62130270	+	62114410	62121007	3pMXE	0.25	50	50	ENSMUST00000182956.8	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	62114410	62185219	+	62114410	62121007	3pMXE	0.25	50	50	ENSMUST00000182956.8	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	61979314;62021201	62021088;62114023	+	61979314;62047775	62047316;62114023	MXE	0.5	100	100	ENSMUST00000182956.8	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	62114410;62116706	62116568;62121007	+	62114410	62121007	cassetteExon	0.5	100	100	ENSMUST00000182956.8	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	61911296	61978997	+	61910050	61978997	A5SS	0.33	50	50	ENSMUST00000182956.8	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	61971097	61978997	+	61910050	61978997	A5SS	0.33	50	50	ENSMUST00000182956.8	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	61979360	62047316	+	61979314	62047316	A5SS	0.25	50	50	ENSMUST00000182956.8	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	62031977	62047316	+	61979314	62047316	A5SS	0.25	50	50	ENSMUST00000182956.8	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	62050121	62114023	+	62047775	62114023	A5SS	0.16	50	50	ENSMUST00000182956.8	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	62090180	62114023	+	62047775	62114023	A5SS	0.16	50	50	ENSMUST00000182956.8	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	62094752	62114023	+	62047775	62114023	A5SS	0.16	50	50	ENSMUST00000182956.8	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	62114146	62114283	+	62114150	62114283	A5SS	0.5	50	50	ENSMUST00000182956.8	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	62114410	62185219	+	62114410	62130270	3pMXE	0.25	50	50	ENSMUST00000182075.8	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	61910050;61979360	61978997;62047316	+	61910050	62047316	cassetteExon	0.5	100	100	ENSMUST00000182075.8	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	62114410	62116568	+	62114410	62130270	A3SS	0.25	50	50	ENSMUST00000182075.8	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	62021201	62114023	+	62047397	62114023	A5SS&ES	0.16	50	50	ENSMUST00000182075.8	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	62031977	62047316	+	61910050	62047316	A5SS	0.25	50	50	ENSMUST00000182075.8	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	62050121	62114023	+	62047397	62114023	A5SS	0.16	50	50	ENSMUST00000182075.8	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	62090180	62114023	+	62047397	62114023	A5SS	0.16	50	50	ENSMUST00000182075.8	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	62094752	62114023	+	62047397	62114023	A5SS	0.16	50	50	ENSMUST00000182075.8	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	61979360	62047316	+	62031977	62047316	A5SS&ES	0.25	50	50	ENSMUST00000180432.9	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	61910050;62047397	62047316;62114023	+	61910050;62021201	61978997;62114023	MXE	0.5	100	100	ENSMUST00000181416.9	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	61910050;62047775	62047316;62114023	+	61910050;62021201	61978997;62114023	MXE	0.5	100	100	ENSMUST00000181416.9	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	61979314;62047397	62047316;62114023	+	61979314;62021201	62021088;62114023	MXE	0.5	100	100	ENSMUST00000181416.9	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	62021201	62031846	+	62021201	62114023	A3SS	0.5	50	50	ENSMUST00000181416.9	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	62114410	62116568	+	62114410	62185219	A3SS	0.25	50	50	ENSMUST00000181416.9	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	62050121	62114023	+	62021201	62114023	A5SS	0.16	50	50	ENSMUST00000181416.9	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	62090180	62114023	+	62021201	62114023	A5SS	0.16	50	50	ENSMUST00000181416.9	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	62094752	62114023	+	62021201	62114023	A5SS	0.16	50	50	ENSMUST00000181416.9	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	61971097	61978997	+	61911296	61978997	A5SS	0.33	50	50	ENSMUST00000183297.8	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	62090180	62114023	+	62050121	62114023	A5SS	0.16	50	50	ENSMUST00000182476.8	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	62094752	62114023	+	62050121	62114023	A5SS	0.16	50	50	ENSMUST00000182476.8	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	62094752	62114023	+	62090180	62114023	A5SS	0.16	50	50	ENSMUST00000182380.8	ENSMUSG00000097039.9	Pvt1	chr15	lncRNA	Pvt1 oncogene
chr15	62942610;62990673	62990585;63011292	-	62942610;63010798	63010539;63011292	MXE	0.5	100	100	ENSMUST00000229781.2	ENSMUSG00000115164.3	Gm30159	chr15	lncRNA	predicted gene, 30159
chr15	62985160	63011292	-	63010798	63011292	A3SS&ES	0.33	50	50	ENSMUST00000229781.2	ENSMUSG00000115164.3	Gm30159	chr15	lncRNA	predicted gene, 30159
chr15	62939840	62989571	-	62939840	62942547	A5SS&ES	0.5	50	50	ENSMUST00000229781.2	ENSMUSG00000115164.3	Gm30159	chr15	lncRNA	predicted gene, 30159
chr15	62939840;62942610	62942547;62990585	-	62939840;62989679	62989571;62990585	MXE	0.5	100	100	ENSMUST00000229281.2	ENSMUSG00000115164.3	Gm30159	chr15	lncRNA	predicted gene, 30159
chr15	62985160	63011292	-	62990673	63011292	A3SS&ES	0.33	50	50	ENSMUST00000229281.2	ENSMUSG00000115164.3	Gm30159	chr15	lncRNA	predicted gene, 30159
chr15	63010798	63011292	-	62990673	63011292	A3SS	0.33	50	50	ENSMUST00000229281.2	ENSMUSG00000115164.3	Gm30159	chr15	lncRNA	predicted gene, 30159
chr15	63225393	63226999	-	63061454	63226999	A3SS	0.5	50	50	ENSMUST00000228339.3	ENSMUSG00000115520.3	Gm41335	chr15	lncRNA	predicted gene, 41335
chr15	63288859	63320923	-	63228881	63320923	A3SS	0.5	50	50	ENSMUST00000228339.3	ENSMUSG00000115520.3	Gm41335	chr15	lncRNA	predicted gene, 41335
chr15	63321099	63351413	-	63321099	63367246	A5SS	0.5	50	50	ENSMUST00000228339.3	ENSMUSG00000115520.3	Gm41335	chr15	lncRNA	predicted gene, 41335
chr15	63127920	63137931	+	63127920	63129805	A3SS&ES	0.5	50	50	ENSMUST00000227423.2	ENSMUSG00000115369.2	Gm49014	chr15	lncRNA	predicted gene, 49014
chr15	63590309	63607578	+	63590309;63593790	63593625;63607578	ES	0.33	50	50	ENSMUST00000226508.2	ENSMUSG00000115676.2	4930449C09Rik	chr15	lncRNA	RIKEN cDNA 4930449C09 gene
chr15	63607066	63607578	+	63593790	63607578	A5SS	0.33	50	50	ENSMUST00000226508.2	ENSMUSG00000115676.2	4930449C09Rik	chr15	lncRNA	RIKEN cDNA 4930449C09 gene
chr15	63607066	63607578	+	63590309	63607578	A5SS	0.33	50	50	ENSMUST00000226839.2	ENSMUSG00000115676.2	4930449C09Rik	chr15	lncRNA	RIKEN cDNA 4930449C09 gene
chr15	63650556	63651623	-	63650556;63651404	63651378;63651623	ES	0.5	50	50	ENSMUST00000110125.9	ENSMUSG00000079025.10	Gsdmc	chr15	protein_coding	gasdermin C
chr15	63689127;63689333	63689304;63690059	+	63689127	63690059	cassetteExon	0.5	100	100	ENSMUST00000185477.7	ENSMUSG00000099435.7	1700065I16Rik	chr15	transcribed_unprocessed_pseudogene	RIKEN cDNA 1700065I16 gene
chr15	63716610	63716928	-	63707796	63716928	A3SS	0.5	50	50	ENSMUST00000188404.7	ENSMUSG00000056293.13	Gsdmc2	chr15	protein_coding	gasdermin C2
chr15	63707796	63716003	-	63707796	63716928	A5SS	0.5	50	50	ENSMUST00000188404.7	ENSMUSG00000056293.13	Gsdmc2	chr15	protein_coding	gasdermin C2
chr15	63741150	63742634	-	63741150	63749385	A5SS	0.5	50	50	ENSMUST00000185526.7	ENSMUSG00000055827.14	Gsdmc3	chr15	protein_coding	gasdermin C3
chr15	63752646	63753233	+	63752646	63752819	A3SS&ES	0.5	50	50	ENSMUST00000185391.2	ENSMUSG00000093867.8	Gsdmcl2	chr15	transcribed_unprocessed_pseudogene	gasdermin C-like 2
chr15	63759357	63760567	+	63759357	63760800	A3SS	0.5	50	50	ENSMUST00000177709.8	ENSMUSG00000093867.8	Gsdmcl2	chr15	transcribed_unprocessed_pseudogene	gasdermin C-like 2
chr15	63786380	63786917	+	63786380;63786582	63786553;63786917	ES	0.5	50	50	ENSMUST00000191285.7	ENSMUSG00000100127.7	Gsdmcl-ps	chr15	transcribed_unprocessed_pseudogene	gasdermin C-like, pseudogene
chr15	63796031	63797266	+	63796031	63796760	A3SS	0.5	50	50	ENSMUST00000185574.7	ENSMUSG00000100127.7	Gsdmcl-ps	chr15	transcribed_unprocessed_pseudogene	gasdermin C-like, pseudogene
chr15	63821976;63829516	63829434;63842779	-	63821976;63828531	63828449;63842779	MXE	0.5	100	100	ENSMUST00000063838.11	ENSMUSG00000022378.15	Cyrib	chr15	protein_coding	CYFIP related Rac1 interactor B
chr15	63828531;63829516	63829434;63842779	-	63828531	63842779	cassetteExon	0.5	100	100	ENSMUST00000063838.11	ENSMUSG00000022378.15	Cyrib	chr15	protein_coding	CYFIP related Rac1 interactor B
chr15	63842817;63894469	63894419;63932044	-	63842817	63932044	cassetteExon	0.5	100	100	ENSMUST00000063838.11	ENSMUSG00000022378.15	Cyrib	chr15	protein_coding	CYFIP related Rac1 interactor B
chr15	63828531	63932276	-	63828531	63842779	A5SS&ES	0.33	50	50	ENSMUST00000063838.11	ENSMUSG00000022378.15	Cyrib	chr15	protein_coding	CYFIP related Rac1 interactor B
chr15	63842817	63869747	-	63842817	63932044	A5SS	0.33	50	50	ENSMUST00000063838.11	ENSMUSG00000022378.15	Cyrib	chr15	protein_coding	CYFIP related Rac1 interactor B
chr15	63842817	63894419	-	63842817	63869747	5pMXE	0.33	50	50	ENSMUST00000164532.3	ENSMUSG00000022378.15	Cyrib	chr15	protein_coding	CYFIP related Rac1 interactor B
chr15	63821976	63829434	-	63821976	63828449	A5SS&ES	0.5	50	50	ENSMUST00000228908.2	ENSMUSG00000022378.15	Cyrib	chr15	protein_coding	CYFIP related Rac1 interactor B
chr15	63828531	63829434	-	63828531	63932276	A5SS	0.33	50	50	ENSMUST00000228908.2	ENSMUSG00000022378.15	Cyrib	chr15	protein_coding	CYFIP related Rac1 interactor B
chr15	63821976	63829434	-	63821976;63828531	63828449;63829434	ES	0.5	50	50	ENSMUST00000227024.2	ENSMUSG00000022378.15	Cyrib	chr15	protein_coding	CYFIP related Rac1 interactor B
chr15	63842817	63932044	-	63894469	63932044	3pMXE	0.5	50	50	ENSMUST00000226129.2	ENSMUSG00000022378.15	Cyrib	chr15	protein_coding	CYFIP related Rac1 interactor B
chr15	63974321	63991807	-	63974321;63982925	63982755;63991807	ES	0.5	50	50	ENSMUST00000177371.8	ENSMUSG00000022377.17	Asap1	chr15	protein_coding	ArfGAP with SH3 domain, ankyrin repeat and PH domain1
chr15	64080405	64221677	-	64080405	64184198	5pMXE	0.33	50	50	ENSMUST00000177371.8	ENSMUSG00000022377.17	Asap1	chr15	protein_coding	ArfGAP with SH3 domain, ankyrin repeat and PH domain1
chr15	64024779;64025701	64025693;64030731	-	64024779	64030731	cassetteExon	0.5	100	100	ENSMUST00000177371.8	ENSMUSG00000022377.17	Asap1	chr15	protein_coding	ArfGAP with SH3 domain, ankyrin repeat and PH domain1
chr15	64045135	64063333	-	64045141	64063333	A3SS	0.5	50	50	ENSMUST00000177371.8	ENSMUSG00000022377.17	Asap1	chr15	protein_coding	ArfGAP with SH3 domain, ankyrin repeat and PH domain1
chr15	63993964	63994538	-	63993964	63995521	A5SS	0.5	50	50	ENSMUST00000177371.8	ENSMUSG00000022377.17	Asap1	chr15	protein_coding	ArfGAP with SH3 domain, ankyrin repeat and PH domain1
chr15	64024779	64030616	-	64024779	64030731	A5SS	0.25	50	50	ENSMUST00000177371.8	ENSMUSG00000022377.17	Asap1	chr15	protein_coding	ArfGAP with SH3 domain, ankyrin repeat and PH domain1
chr15	64024779	64030767	-	64024779	64030731	A5SS	0.25	50	50	ENSMUST00000177371.8	ENSMUSG00000022377.17	Asap1	chr15	protein_coding	ArfGAP with SH3 domain, ankyrin repeat and PH domain1
chr15	64080405	64183467	-	64080405	64184198	A5SS	0.33	50	50	ENSMUST00000177371.8	ENSMUSG00000022377.17	Asap1	chr15	protein_coding	ArfGAP with SH3 domain, ankyrin repeat and PH domain1
chr15	64024779;64025701	64025693;64030767	-	64024779	64030767	cassetteExon	0.5	100	100	ENSMUST00000177083.8	ENSMUSG00000022377.17	Asap1	chr15	protein_coding	ArfGAP with SH3 domain, ankyrin repeat and PH domain1
chr15	64024779	64030616	-	64024779	64030767	A5SS	0.25	50	50	ENSMUST00000177083.8	ENSMUSG00000022377.17	Asap1	chr15	protein_coding	ArfGAP with SH3 domain, ankyrin repeat and PH domain1
chr15	64080405	64221677	-	64080405;64184324	64184198;64221677	ES	0.5	50	50	ENSMUST00000177374.8	ENSMUSG00000022377.17	Asap1	chr15	protein_coding	ArfGAP with SH3 domain, ankyrin repeat and PH domain1
chr15	64024779	64030616	-	64024779	64025693	A5SS&ES	0.25	50	50	ENSMUST00000177374.8	ENSMUSG00000022377.17	Asap1	chr15	protein_coding	ArfGAP with SH3 domain, ankyrin repeat and PH domain1
chr15	64024779	64030767	-	64024779	64025693	A5SS&ES	0.25	50	50	ENSMUST00000177374.8	ENSMUSG00000022377.17	Asap1	chr15	protein_coding	ArfGAP with SH3 domain, ankyrin repeat and PH domain1
chr15	64025701	64030767	-	64025701	64030731	A5SS	0.5	50	50	ENSMUST00000177374.8	ENSMUSG00000022377.17	Asap1	chr15	protein_coding	ArfGAP with SH3 domain, ankyrin repeat and PH domain1
chr15	64184324	64185381	-	64184324	64221677	A5SS	0.5	50	50	ENSMUST00000177374.8	ENSMUSG00000022377.17	Asap1	chr15	protein_coding	ArfGAP with SH3 domain, ankyrin repeat and PH domain1
chr15	64024779	64030731	-	64024779	64025693	A5SS&ES	0.25	50	50	ENSMUST00000175793.8	ENSMUSG00000022377.17	Asap1	chr15	protein_coding	ArfGAP with SH3 domain, ankyrin repeat and PH domain1
chr15	64080405	64183467	-	64080405	64221677	A5SS	0.33	50	50	ENSMUST00000176821.8	ENSMUSG00000022377.17	Asap1	chr15	protein_coding	ArfGAP with SH3 domain, ankyrin repeat and PH domain1
chr15	63971106	63972683	+	63971106;63972013	63971939;63972683	ES	0.5	50	50	ENSMUST00000176762.3	ENSMUSG00000093695.3	Gm20717	chr15	lncRNA	predicted gene 20717
chr15	64302182	64303785	+	64302015	64303785	A5SS	0.5	50	50	ENSMUST00000227720.2	ENSMUSG00000115169.2	Gm30563	chr15	lncRNA	predicted gene, 30563
chr15	64609411	64618746	-	64609411;64616779	64616690;64618746	ES	0.5	50	50	ENSMUST00000023007.7	ENSMUSG00000022376.9	Adcy8	chr15	protein_coding	adenylate cyclase 8
chr15	65659095	65687184	+	65659095	65661989	3pMXE	0.33	50	50	ENSMUST00000174135.2	ENSMUSG00000015002.19	Efr3a	chr15	protein_coding	EFR3 homolog A
chr15	65659095;65660230	65660151;65661989	+	65659095	65661989	cassetteExon	0.5	100	100	ENSMUST00000174135.2	ENSMUSG00000015002.19	Efr3a	chr15	protein_coding	EFR3 homolog A
chr15	65659749	65661989	+	65659095	65661989	A5SS	0.33	50	50	ENSMUST00000174135.2	ENSMUSG00000015002.19	Efr3a	chr15	protein_coding	EFR3 homolog A
chr15	65691719	65701576	+	65691719;65696584	65696463;65701576	ES	0.5	50	50	ENSMUST00000015146.16	ENSMUSG00000015002.19	Efr3a	chr15	protein_coding	EFR3 homolog A
chr15	65659095	65660151	+	65659095	65687184	A3SS	0.33	50	50	ENSMUST00000015146.16	ENSMUSG00000015002.19	Efr3a	chr15	protein_coding	EFR3 homolog A
chr15	65725455	65725742	+	65725455	65726478	A3SS	0.5	50	50	ENSMUST00000015146.16	ENSMUSG00000015002.19	Efr3a	chr15	protein_coding	EFR3 homolog A
chr15	65739168	65740803	+	65739168	65743002	A3SS	0.5	50	50	ENSMUST00000015146.16	ENSMUSG00000015002.19	Efr3a	chr15	protein_coding	EFR3 homolog A
chr15	65682173	65687184	+	65659095	65687184	A5SS	0.5	50	50	ENSMUST00000015146.16	ENSMUSG00000015002.19	Efr3a	chr15	protein_coding	EFR3 homolog A
chr15	65687327	65690282	+	65687260	65690282	A5SS	0.5	50	50	ENSMUST00000015146.16	ENSMUSG00000015002.19	Efr3a	chr15	protein_coding	EFR3 homolog A
chr15	65659749	65661989	+	65660230	65661989	A5SS&ES	0.33	50	50	ENSMUST00000096411.4	ENSMUSG00000015002.19	Efr3a	chr15	protein_coding	EFR3 homolog A
chr15	65691719	65701576	+	65691719	65696463	3pMXE	0.5	50	50	ENSMUST00000172756.2	ENSMUSG00000015002.19	Efr3a	chr15	protein_coding	EFR3 homolog A
chr15	65755723	65761257	-	65755723;65759995	65759945;65761257	ES	0.5	50	50	ENSMUST00000156996.8	ENSMUSG00000015001.18	Oc90	chr15	protein_coding	otoconin 90
chr15	65755723;65759478	65759431;65759945	-	65755723	65759945	cassetteExon	0.5	100	100	ENSMUST00000156996.8	ENSMUSG00000015001.18	Oc90	chr15	protein_coding	otoconin 90
chr15	65753524	65754374	-	65753527	65754374	A3SS	0.5	50	50	ENSMUST00000156996.8	ENSMUSG00000015001.18	Oc90	chr15	protein_coding	otoconin 90
chr15	65755723	65759431	-	65755723	65761257	A5SS	0.33	50	50	ENSMUST00000079776.14	ENSMUSG00000015001.18	Oc90	chr15	protein_coding	otoconin 90
chr15	65794982	65795709	-	65789891	65795709	A3SS	0.5	50	50	ENSMUST00000239034.2	ENSMUSG00000072511.4	Hhla1	chr15	protein_coding	HERV-H LTR-associating 1
chr15	65903319	65974983	-	65903319	66157685	A5SS	0.5	50	50	ENSMUST00000070256.9	ENSMUSG00000056258.10	Kcnq3	chr15	protein_coding	potassium voltage-gated channel, subfamily Q, member 3
chr15	66469296	66475876	+	66469296;66469603	66469526;66475876	ES	0.5	50	50	ENSMUST00000230882.2	ENSMUSG00000072501.6	Phf20l1	chr15	protein_coding	PHD finger protein 20-like 1
chr15	66449696	66451922	+	66449696	66451918	A3SS	0.5	50	50	ENSMUST00000230882.2	ENSMUSG00000072501.6	Phf20l1	chr15	protein_coding	PHD finger protein 20-like 1
chr15	66466827	66466952	+	66466827	66466964	A3SS	0.5	50	50	ENSMUST00000230882.2	ENSMUSG00000072501.6	Phf20l1	chr15	protein_coding	PHD finger protein 20-like 1
chr15	66469296	66469514	+	66469296	66469526	A3SS	0.33	50	50	ENSMUST00000230882.2	ENSMUSG00000072501.6	Phf20l1	chr15	protein_coding	PHD finger protein 20-like 1
chr15	66476089	66476626	+	66476089	66476629	A3SS	0.5	50	50	ENSMUST00000230882.2	ENSMUSG00000072501.6	Phf20l1	chr15	protein_coding	PHD finger protein 20-like 1
chr15	66469296	66475876	+	66469296;66469603	66469514;66475876	ES	0.5	50	50	ENSMUST00000230915.2	ENSMUSG00000072501.6	Phf20l1	chr15	protein_coding	PHD finger protein 20-like 1
chr15	66494666	66495841	+	66494666;66495732	66495610;66495841	ES	0.5	50	50	ENSMUST00000229576.2	ENSMUSG00000072501.6	Phf20l1	chr15	protein_coding	PHD finger protein 20-like 1
chr15	66502894	66504555	+	66502815	66504555	A5SS	0.5	50	50	ENSMUST00000229576.2	ENSMUSG00000072501.6	Phf20l1	chr15	protein_coding	PHD finger protein 20-like 1
chr15	66502894	66504669	+	66502894	66504555	A3SS	0.5	50	50	ENSMUST00000229033.2	ENSMUSG00000072501.6	Phf20l1	chr15	protein_coding	PHD finger protein 20-like 1
chr15	66591607	66601365	+	66591607;66597130	66596939;66601365	ES	0.5	50	50	ENSMUST00000065916.14	ENSMUSG00000053469.15	Tg	chr15	protein_coding	thyroglobulin
chr15	66613478	66629720	+	66613478;66620645	66620580;66629720	ES	0.5	50	50	ENSMUST00000065916.14	ENSMUSG00000053469.15	Tg	chr15	protein_coding	thyroglobulin
chr15	66573214	66577054	+	66570504	66577054	A5SS	0.5	50	50	ENSMUST00000065916.14	ENSMUSG00000053469.15	Tg	chr15	protein_coding	thyroglobulin
chr15	66587883	66588977	+	66587036	66588977	A5SS	0.33	50	50	ENSMUST00000065916.14	ENSMUSG00000053469.15	Tg	chr15	protein_coding	thyroglobulin
chr15	66588500	66588977	+	66587036	66588977	A5SS	0.33	50	50	ENSMUST00000065916.14	ENSMUSG00000053469.15	Tg	chr15	protein_coding	thyroglobulin
chr15	66670673	66699112	+	66645330	66699112	A5SS	0.5	50	50	ENSMUST00000065916.14	ENSMUSG00000053469.15	Tg	chr15	protein_coding	thyroglobulin
chr15	66588500	66588977	+	66587883	66588977	A5SS	0.33	50	50	ENSMUST00000171045.9	ENSMUSG00000053469.15	Tg	chr15	protein_coding	thyroglobulin
chr15	66673377	66703419	-	66673377;66684646	66684378;66703419	ES	0.5	50	50	ENSMUST00000164163.8	ENSMUSG00000022372.15	Sla	chr15	protein_coding	src-like adaptor
chr15	66673377	66703419	-	66673377	66684378	5pMXE	0.5	50	50	ENSMUST00000100572.10	ENSMUSG00000022372.15	Sla	chr15	protein_coding	src-like adaptor
chr15	66778337	66784678	+	66778529	66784678	A5SS	0.25	50	50	ENSMUST00000005255.9	ENSMUSG00000005124.11	Ccn4	chr15	protein_coding	cellular communication network factor 4
chr15	66781227	66784678	+	66778529	66784678	A5SS	0.25	50	50	ENSMUST00000005255.9	ENSMUSG00000005124.11	Ccn4	chr15	protein_coding	cellular communication network factor 4
chr15	66781580	66784678	+	66778529	66784678	A5SS	0.25	50	50	ENSMUST00000005255.9	ENSMUSG00000005124.11	Ccn4	chr15	protein_coding	cellular communication network factor 4
chr15	66778529	66791004	+	66789319	66791004	A5SS&ES	0.5	50	50	ENSMUST00000147079.8	ENSMUSG00000005124.11	Ccn4	chr15	protein_coding	cellular communication network factor 4
chr15	66781227	66784678	+	66778337	66784678	A5SS	0.25	50	50	ENSMUST00000147079.8	ENSMUSG00000005124.11	Ccn4	chr15	protein_coding	cellular communication network factor 4
chr15	66781580	66784678	+	66778337	66784678	A5SS	0.25	50	50	ENSMUST00000147079.8	ENSMUSG00000005124.11	Ccn4	chr15	protein_coding	cellular communication network factor 4
chr15	66778529	66784678	+	66778529	66791004	A3SS	0.5	50	50	ENSMUST00000118823.2	ENSMUSG00000005124.11	Ccn4	chr15	protein_coding	cellular communication network factor 4
chr15	66781227	66784678	+	66781227;66781580	66781524;66784678	ES	0.5	50	50	ENSMUST00000230535.2	ENSMUSG00000005124.11	Ccn4	chr15	protein_coding	cellular communication network factor 4
chr15	66781227	66784678	+	66781580	66784678	A5SS	0.25	50	50	ENSMUST00000133863.2	ENSMUSG00000005124.11	Ccn4	chr15	protein_coding	cellular communication network factor 4
chr15	66815913	66818281	-	66815913;66816687	66816625;66818281	ES	0.5	50	50	ENSMUST00000005256.14	ENSMUSG00000005125.14	Ndrg1	chr15	protein_coding	N-myc downstream regulated gene 1
chr15	66820333;66821109	66820966;66831211	-	66820333	66831211	cassetteExon	0.5	100	100	ENSMUST00000005256.14	ENSMUSG00000005125.14	Ndrg1	chr15	protein_coding	N-myc downstream regulated gene 1
chr15	66820273	66831211	-	66820333	66831211	A3SS	0.33	50	50	ENSMUST00000005256.14	ENSMUSG00000005125.14	Ndrg1	chr15	protein_coding	N-myc downstream regulated gene 1
chr15	66832464	66841353	-	66832401	66841353	A3SS	0.5	50	50	ENSMUST00000005256.14	ENSMUSG00000005125.14	Ndrg1	chr15	protein_coding	N-myc downstream regulated gene 1
chr15	66832401	66839536	-	66832401	66841353	A5SS	0.33	50	50	ENSMUST00000005256.14	ENSMUSG00000005125.14	Ndrg1	chr15	protein_coding	N-myc downstream regulated gene 1
chr15	66832401	66839733	-	66832401	66841353	A5SS	0.33	50	50	ENSMUST00000005256.14	ENSMUSG00000005125.14	Ndrg1	chr15	protein_coding	N-myc downstream regulated gene 1
chr15	66816683	66820312	-	66812016	66820312	A3SS	0.5	50	50	ENSMUST00000166420.8	ENSMUSG00000005125.14	Ndrg1	chr15	protein_coding	N-myc downstream regulated gene 1
chr15	66815913	66818281	-	66815913	66816625	A5SS&ES	0.5	50	50	ENSMUST00000168542.8	ENSMUSG00000005125.14	Ndrg1	chr15	protein_coding	N-myc downstream regulated gene 1
chr15	66816683	66820300	-	66816683	66820312	A5SS	0.5	50	50	ENSMUST00000168542.8	ENSMUSG00000005125.14	Ndrg1	chr15	protein_coding	N-myc downstream regulated gene 1
chr15	66832401	66839536	-	66832401	66839733	A5SS	0.33	50	50	ENSMUST00000168979.8	ENSMUSG00000005125.14	Ndrg1	chr15	protein_coding	N-myc downstream regulated gene 1
chr15	66820273	66831211	-	66821109	66831211	A3SS&ES	0.33	50	50	ENSMUST00000171266.8	ENSMUSG00000005125.14	Ndrg1	chr15	protein_coding	N-myc downstream regulated gene 1
chr15	67025019;67034900	67034836;67048481	-	67025019	67048481	cassetteExon	0.5	100	100	ENSMUST00000229028.2	ENSMUSG00000013846.11	St3gal1	chr15	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 1
chr15	66985739	67024892	-	67000456	67024892	A3SS&ES	0.5	50	50	ENSMUST00000229028.2	ENSMUSG00000013846.11	St3gal1	chr15	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 1
chr15	67000456	67000698	-	67000456	67024892	A5SS	0.5	50	50	ENSMUST00000229028.2	ENSMUSG00000013846.11	St3gal1	chr15	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 1
chr15	67956410	67982293	-	67956410	67973320	A5SS&ES	0.5	50	50	ENSMUST00000162054.9	ENSMUSG00000022335.18	Zfat	chr15	protein_coding	zinc finger and AT hook domain containing
chr15	67976928	67982293	-	67976928	67982326	A5SS	0.5	50	50	ENSMUST00000162054.9	ENSMUSG00000022335.18	Zfat	chr15	protein_coding	zinc finger and AT hook domain containing
chr15	68056420	68084442	-	68056420	68058900	A5SS&ES	0.5	50	50	ENSMUST00000162054.9	ENSMUSG00000022335.18	Zfat	chr15	protein_coding	zinc finger and AT hook domain containing
chr15	68059085	68084442	-	68059085	68084463	A5SS	0.5	50	50	ENSMUST00000162054.9	ENSMUSG00000022335.18	Zfat	chr15	protein_coding	zinc finger and AT hook domain containing
chr15	68056420	68084442	-	68056420;68059085	68058900;68084442	ES	0.5	50	50	ENSMUST00000162173.8	ENSMUSG00000022335.18	Zfat	chr15	protein_coding	zinc finger and AT hook domain containing
chr15	67976928	67982293	-	67956410	67982293	A3SS	0.5	50	50	ENSMUST00000162173.8	ENSMUSG00000022335.18	Zfat	chr15	protein_coding	zinc finger and AT hook domain containing
chr15	68801968	68866901	+	68800682	68866901	A5SS	0.5	50	50	ENSMUST00000022954.7	ENSMUSG00000022332.9	Khdrbs3	chr15	protein_coding	KH domain containing, RNA binding, signal transduction associated 3
chr15	68867019	68885207	+	68867019	68896549	A3SS	0.5	50	50	ENSMUST00000230847.2	ENSMUSG00000022332.9	Khdrbs3	chr15	protein_coding	KH domain containing, RNA binding, signal transduction associated 3
chr15	68889323	68896549	+	68867019	68896549	A5SS	0.5	50	50	ENSMUST00000230847.2	ENSMUSG00000022332.9	Khdrbs3	chr15	protein_coding	KH domain containing, RNA binding, signal transduction associated 3
chr15	71493946	71598409	-	71493946	71599518	A5SS	0.5	50	50	ENSMUST00000022953.10	ENSMUSG00000036800.9	Fam135b	chr15	protein_coding	family with sequence similarity 135, member B
chr15	71824425	71834522	-	71824425	71826097	5pMXE	0.5	50	50	ENSMUST00000229585.2	ENSMUSG00000079022.11	Col22a1	chr15	protein_coding	collagen, type XXII, alpha 1
chr15	71776738	71778377	-	71774707	71778377	A3SS	0.5	50	50	ENSMUST00000229585.2	ENSMUSG00000079022.11	Col22a1	chr15	protein_coding	collagen, type XXII, alpha 1
chr15	72033605;72036733	72036528;72044008	+	72033605	72044008	cassetteExon	0.5	100	100	ENSMUST00000229807.2	ENSMUSG00000116068.2	Gm49457	chr15	lncRNA	predicted gene, 49457
chr15	72044139	72046135	+	72044139	72091727	A3SS	0.5	50	50	ENSMUST00000229807.2	ENSMUSG00000116068.2	Gm49457	chr15	lncRNA	predicted gene, 49457
chr15	72903492	72922444	-	72903492;72914052	72914026;72922444	ES	0.5	50	50	ENSMUST00000023276.16	ENSMUSG00000047921.18	Trappc9	chr15	protein_coding	trafficking protein particle complex 9
chr15	72924156	72929771	-	72924156	72927597	5pMXE	0.5	50	50	ENSMUST00000023276.16	ENSMUSG00000047921.18	Trappc9	chr15	protein_coding	trafficking protein particle complex 9
chr15	72673251	72775406	-	72629207	72775406	A3SS	0.33	50	50	ENSMUST00000023276.16	ENSMUSG00000047921.18	Trappc9	chr15	protein_coding	trafficking protein particle complex 9
chr15	72724362	72775406	-	72629207	72775406	A3SS	0.33	50	50	ENSMUST00000023276.16	ENSMUSG00000047921.18	Trappc9	chr15	protein_coding	trafficking protein particle complex 9
chr15	72866777	72871821	-	72835535	72871821	A3SS	0.5	50	50	ENSMUST00000023276.16	ENSMUSG00000047921.18	Trappc9	chr15	protein_coding	trafficking protein particle complex 9
chr15	72724362	72775406	-	72673251	72775406	A3SS	0.33	50	50	ENSMUST00000170633.9	ENSMUSG00000047921.18	Trappc9	chr15	protein_coding	trafficking protein particle complex 9
chr15	72964808	72969185	+	72964808	72965373	3pMXE	0.5	50	50	ENSMUST00000089765.9	ENSMUSG00000068391.9	Chrac1	chr15	protein_coding	chromatin accessibility complex 1
chr15	73018414	73049618	-	73018414	73056610	A5SS	0.5	50	50	ENSMUST00000044113.12	ENSMUSG00000036698.12	Ago2	chr15	protein_coding	argonaute RISC catalytic subunit 2
chr15	73082746	73087828	-	73082746;73083844	73083836;73087828	ES	0.5	50	50	ENSMUST00000226988.3	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73114326	73131397	-	73114326;73129087	73128883;73131397	ES	0.5	50	50	ENSMUST00000226988.3	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73136178	73140658	-	73136178;73138051	73137951;73140658	ES	0.5	50	50	ENSMUST00000226988.3	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73215208	73266497	-	73215208;73232186	73231875;73266497	ES	0.16	50	50	ENSMUST00000226988.3	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73266593	73295088	-	73266593	73294858	5pMXE	0.5	50	50	ENSMUST00000226988.3	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73146433;73147490	73147470;73148706	-	73146433	73148706	cassetteExon	0.5	100	100	ENSMUST00000226988.3	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73148762;73154084	73154067;73163884	-	73148762	73163884	cassetteExon	0.5	100	100	ENSMUST00000226988.3	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73215208;73237044	73236890;73266497	-	73215208;73232186	73231875;73266497	MXE	0.5	100	100	ENSMUST00000226988.3	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73215208;73263729	73263608;73266497	-	73215208;73232186	73231875;73266497	MXE	0.5	100	100	ENSMUST00000226988.3	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73215208;73264296	73264193;73266497	-	73215208;73232186	73231875;73266497	MXE	0.5	100	100	ENSMUST00000226988.3	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73155199	73163884	-	73148762	73163884	A3SS	0.33	50	50	ENSMUST00000226988.3	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73192264	73192624	-	73181718	73192624	A3SS	0.5	50	50	ENSMUST00000226988.3	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73114326	73114717	-	73114326	73128883	A5SS	0.25	50	50	ENSMUST00000226988.3	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73114326	73114884	-	73114326	73128883	A5SS	0.25	50	50	ENSMUST00000226988.3	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73154084	73163884	-	73154084;73155199	73155116;73163884	ES	0.33	50	50	ENSMUST00000239146.2	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73202864	73266497	-	73202864;73215208	73214982;73266497	ES	0.16	50	50	ENSMUST00000239146.2	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73215208	73294858	-	73215208;73266593	73266497;73294858	ES	0.5	50	50	ENSMUST00000239146.2	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73215208;73237044	73236890;73266497	-	73215208	73266497	cassetteExon	0.5	100	100	ENSMUST00000239146.2	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73215208;73263729	73263608;73266497	-	73215208	73266497	cassetteExon	0.5	100	100	ENSMUST00000239146.2	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73215208;73264296	73264193;73266497	-	73215208	73266497	cassetteExon	0.5	100	100	ENSMUST00000239146.2	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73215208;73263729	73263608;73266497	-	73215208;73237044	73236890;73266497	MXE	0.5	100	100	ENSMUST00000227569.2	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73215208;73264296	73264193;73266497	-	73215208;73237044	73236890;73266497	MXE	0.5	100	100	ENSMUST00000227569.2	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73202864	73266497	-	73202864	73214982	5pMXE	0.5	50	50	ENSMUST00000228628.2	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73114326	73114717	-	73114326	73131397	A5SS	0.25	50	50	ENSMUST00000226742.2	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73114326	73114884	-	73114326	73131397	A5SS	0.25	50	50	ENSMUST00000226742.2	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73114326	73114884	-	73114326	73114717	5pMXE	0.25	50	50	ENSMUST00000227686.2	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73232186	73266497	-	73202864	73266497	A3SS	0.16	50	50	ENSMUST00000226791.2	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73237044	73266497	-	73202864	73266497	A3SS	0.16	50	50	ENSMUST00000226791.2	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73263729	73266497	-	73202864	73266497	A3SS	0.16	50	50	ENSMUST00000226791.2	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73264296	73266497	-	73202864	73266497	A3SS	0.16	50	50	ENSMUST00000226791.2	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73215208	73264193	-	73215208;73263729	73263608;73264193	ES	0.5	50	50	ENSMUST00000228180.3	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73263729	73266497	-	73263729;73264296	73264193;73266497	ES	0.16	50	50	ENSMUST00000228180.3	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73215208;73232186	73231875;73266497	-	73215208;73264296	73263608;73266497	MXE	0.5	100	100	ENSMUST00000228180.3	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73215208;73237044	73236890;73266497	-	73215208;73264296	73263608;73266497	MXE	0.5	100	100	ENSMUST00000228180.3	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73202864;73266593	73266497;73294858	-	73202864;73215208	73214982;73294858	MXE	0.5	100	100	ENSMUST00000226466.2	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73215208	73231875	-	73215208	73294858	A5SS	0.16	50	50	ENSMUST00000226466.2	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73215208	73236890	-	73215208	73294858	A5SS	0.16	50	50	ENSMUST00000226466.2	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73215208	73263608	-	73215208	73294858	A5SS	0.16	50	50	ENSMUST00000226466.2	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73215208	73264193	-	73215208	73294858	A5SS	0.16	50	50	ENSMUST00000226466.2	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73215208;73264296	73264193;73266497	-	73215208;73263729	73263608;73266497	MXE	0.5	100	100	ENSMUST00000226848.2	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73215208	73294858	-	73266593	73294858	3pMXE	0.5	50	50	ENSMUST00000227435.2	ENSMUSG00000022607.19	Ptk2	chr15	protein_coding	PTK2 protein tyrosine kinase 2
chr15	73409260	73414569	+	73409260;73412697	73412542;73414569	ES	0.5	50	50	ENSMUST00000043414.12	ENSMUSG00000036661.15	Dennd3	chr15	protein_coding	DENN/MADD domain containing 3
chr15	73439015;73439962	73439835;73440271	+	73439015	73440271	cassetteExon	0.5	100	100	ENSMUST00000043414.12	ENSMUSG00000036661.15	Dennd3	chr15	protein_coding	DENN/MADD domain containing 3
chr15	73436485	73436945	+	73436485	73436865	A3SS	0.5	50	50	ENSMUST00000043414.12	ENSMUSG00000036661.15	Dennd3	chr15	protein_coding	DENN/MADD domain containing 3
chr15	73390502	73394079	+	73384696	73394079	A5SS	0.5	50	50	ENSMUST00000043414.12	ENSMUSG00000036661.15	Dennd3	chr15	protein_coding	DENN/MADD domain containing 3
chr15	73439015	73440271	+	73439015	73439835	3pMXE	0.5	50	50	ENSMUST00000160267.3	ENSMUSG00000036661.15	Dennd3	chr15	protein_coding	DENN/MADD domain containing 3
chr15	73477925	73516743	-	73477925	73496175	5pMXE	0.25	50	50	ENSMUST00000151288.8	ENSMUSG00000079020.10	Slc45a4	chr15	protein_coding	solute carrier family 45, member 4
chr15	73477925	73517343	-	73477925	73496175	5pMXE	0.25	50	50	ENSMUST00000151288.8	ENSMUSG00000079020.10	Slc45a4	chr15	protein_coding	solute carrier family 45, member 4
chr15	73458934	73459370	-	73458934	73459394	A5SS	0.5	50	50	ENSMUST00000151288.8	ENSMUSG00000079020.10	Slc45a4	chr15	protein_coding	solute carrier family 45, member 4
chr15	73459573	73460746	-	73459573	73461235	A5SS	0.5	50	50	ENSMUST00000151288.8	ENSMUSG00000079020.10	Slc45a4	chr15	protein_coding	solute carrier family 45, member 4
chr15	73461423	73468244	-	73461423	73477291	A5SS	0.5	50	50	ENSMUST00000151288.8	ENSMUSG00000079020.10	Slc45a4	chr15	protein_coding	solute carrier family 45, member 4
chr15	73477925	73489158	-	73477925	73496175	A5SS	0.25	50	50	ENSMUST00000151288.8	ENSMUSG00000079020.10	Slc45a4	chr15	protein_coding	solute carrier family 45, member 4
chr15	73477925	73516743	-	73477925	73489158	5pMXE	0.25	50	50	ENSMUST00000076224.12	ENSMUSG00000079020.10	Slc45a4	chr15	protein_coding	solute carrier family 45, member 4
chr15	73477925	73517343	-	73477925	73489158	5pMXE	0.25	50	50	ENSMUST00000076224.12	ENSMUSG00000079020.10	Slc45a4	chr15	protein_coding	solute carrier family 45, member 4
chr15	73477925	73516743	-	73477925	73517343	A5SS	0.25	50	50	ENSMUST00000130765.2	ENSMUSG00000079020.10	Slc45a4	chr15	protein_coding	solute carrier family 45, member 4
chr15	73595364	73622978	+	73595364	73625605	A3SS	0.5	50	50	ENSMUST00000230864.2	ENSMUSG00000059895.14	Ptp4a3	chr15	protein_coding	protein tyrosine phosphatase 4a3
chr15	73623876	73625605	+	73595364	73625605	A5SS	0.5	50	50	ENSMUST00000230864.2	ENSMUSG00000059895.14	Ptp4a3	chr15	protein_coding	protein tyrosine phosphatase 4a3
chr15	73595364	73625605	+	73595364;73623876	73622978;73625605	ES	0.5	50	50	ENSMUST00000165541.8	ENSMUSG00000059895.14	Ptp4a3	chr15	protein_coding	protein tyrosine phosphatase 4a3
chr15	73596697	73622978	+	73595364	73622978	A5SS	0.16	50	50	ENSMUST00000165541.8	ENSMUSG00000059895.14	Ptp4a3	chr15	protein_coding	protein tyrosine phosphatase 4a3
chr15	73597418	73622978	+	73595364	73622978	A5SS	0.16	50	50	ENSMUST00000165541.8	ENSMUSG00000059895.14	Ptp4a3	chr15	protein_coding	protein tyrosine phosphatase 4a3
chr15	73619620	73622978	+	73595364	73622978	A5SS	0.16	50	50	ENSMUST00000165541.8	ENSMUSG00000059895.14	Ptp4a3	chr15	protein_coding	protein tyrosine phosphatase 4a3
chr15	73619772	73622978	+	73595364	73622978	A5SS	0.16	50	50	ENSMUST00000165541.8	ENSMUSG00000059895.14	Ptp4a3	chr15	protein_coding	protein tyrosine phosphatase 4a3
chr15	73620314	73622978	+	73595364	73622978	A5SS	0.16	50	50	ENSMUST00000165541.8	ENSMUSG00000059895.14	Ptp4a3	chr15	protein_coding	protein tyrosine phosphatase 4a3
chr15	73597418	73622978	+	73596697	73622978	A5SS	0.16	50	50	ENSMUST00000230177.2	ENSMUSG00000059895.14	Ptp4a3	chr15	protein_coding	protein tyrosine phosphatase 4a3
chr15	73619620	73622978	+	73596697	73622978	A5SS	0.16	50	50	ENSMUST00000230177.2	ENSMUSG00000059895.14	Ptp4a3	chr15	protein_coding	protein tyrosine phosphatase 4a3
chr15	73619772	73622978	+	73596697	73622978	A5SS	0.16	50	50	ENSMUST00000230177.2	ENSMUSG00000059895.14	Ptp4a3	chr15	protein_coding	protein tyrosine phosphatase 4a3
chr15	73620314	73622978	+	73596697	73622978	A5SS	0.16	50	50	ENSMUST00000230177.2	ENSMUSG00000059895.14	Ptp4a3	chr15	protein_coding	protein tyrosine phosphatase 4a3
chr15	73619620	73622978	+	73597418	73622978	A5SS	0.16	50	50	ENSMUST00000163582.9	ENSMUSG00000059895.14	Ptp4a3	chr15	protein_coding	protein tyrosine phosphatase 4a3
chr15	73619772	73622978	+	73597418	73622978	A5SS	0.16	50	50	ENSMUST00000163582.9	ENSMUSG00000059895.14	Ptp4a3	chr15	protein_coding	protein tyrosine phosphatase 4a3
chr15	73620314	73622978	+	73597418	73622978	A5SS	0.16	50	50	ENSMUST00000163582.9	ENSMUSG00000059895.14	Ptp4a3	chr15	protein_coding	protein tyrosine phosphatase 4a3
chr15	73619772	73622978	+	73619620	73622978	A5SS	0.16	50	50	ENSMUST00000230307.2	ENSMUSG00000059895.14	Ptp4a3	chr15	protein_coding	protein tyrosine phosphatase 4a3
chr15	73620314	73622978	+	73619620	73622978	A5SS	0.16	50	50	ENSMUST00000230307.2	ENSMUSG00000059895.14	Ptp4a3	chr15	protein_coding	protein tyrosine phosphatase 4a3
chr15	73620314	73622978	+	73619772	73622978	A5SS	0.16	50	50	ENSMUST00000231209.2	ENSMUSG00000059895.14	Ptp4a3	chr15	protein_coding	protein tyrosine phosphatase 4a3
chr15	73664634	73670729	-	73664634;73665024	73664917;73670729	ES	0.5	50	50	ENSMUST00000238402.2	ENSMUSG00000072487.12	Mroh5	chr15	protein_coding	maestro heat-like repeat family member 5
chr15	73662727;73663276	73663178;73663573	-	73662727	73663573	cassetteExon	0.5	100	100	ENSMUST00000238402.2	ENSMUSG00000072487.12	Mroh5	chr15	protein_coding	maestro heat-like repeat family member 5
chr15	73635691	73636578	-	73635759	73636578	A3SS	0.5	50	50	ENSMUST00000238402.2	ENSMUSG00000072487.12	Mroh5	chr15	protein_coding	maestro heat-like repeat family member 5
chr15	73691261	73692072	-	73691261	73711417	A5SS	0.5	50	50	ENSMUST00000071419.12	ENSMUSG00000072487.12	Mroh5	chr15	protein_coding	maestro heat-like repeat family member 5
chr15	74446017	74452414	+	74446017;74447773	74447688;74452414	ES	0.33	50	50	ENSMUST00000042035.16	ENSMUSG00000034730.18	Adgrb1	chr15	protein_coding	adhesion G protein-coupled receptor B1
chr15	74447773;74449342	74449244;74452414	+	74447773	74452414	cassetteExon	0.5	100	100	ENSMUST00000042035.16	ENSMUSG00000034730.18	Adgrb1	chr15	protein_coding	adhesion G protein-coupled receptor B1
chr15	74411162	74411542	+	74411162	74411556	A3SS	0.5	50	50	ENSMUST00000042035.16	ENSMUSG00000034730.18	Adgrb1	chr15	protein_coding	adhesion G protein-coupled receptor B1
chr15	74412409	74412676	+	74412409	74412667	A3SS	0.5	50	50	ENSMUST00000042035.16	ENSMUSG00000034730.18	Adgrb1	chr15	protein_coding	adhesion G protein-coupled receptor B1
chr15	74447773	74452514	+	74447773	74452414	A3SS	0.33	50	50	ENSMUST00000042035.16	ENSMUSG00000034730.18	Adgrb1	chr15	protein_coding	adhesion G protein-coupled receptor B1
chr15	74433187	74435809	+	74421906	74435809	A5SS	0.25	50	50	ENSMUST00000042035.16	ENSMUSG00000034730.18	Adgrb1	chr15	protein_coding	adhesion G protein-coupled receptor B1
chr15	74435442	74435809	+	74421906	74435809	A5SS	0.25	50	50	ENSMUST00000042035.16	ENSMUSG00000034730.18	Adgrb1	chr15	protein_coding	adhesion G protein-coupled receptor B1
chr15	74435730	74435809	+	74421906	74435809	A5SS	0.25	50	50	ENSMUST00000042035.16	ENSMUSG00000034730.18	Adgrb1	chr15	protein_coding	adhesion G protein-coupled receptor B1
chr15	74442885	74443262	+	74441821	74443262	A5SS	0.5	50	50	ENSMUST00000042035.16	ENSMUSG00000034730.18	Adgrb1	chr15	protein_coding	adhesion G protein-coupled receptor B1
chr15	74456281	74458606	+	74456266	74458606	A5SS	0.5	50	50	ENSMUST00000042035.16	ENSMUSG00000034730.18	Adgrb1	chr15	protein_coding	adhesion G protein-coupled receptor B1
chr15	74449342	74452414	+	74446017	74452414	A5SS	0.33	50	50	ENSMUST00000186360.7	ENSMUSG00000034730.18	Adgrb1	chr15	protein_coding	adhesion G protein-coupled receptor B1
chr15	74435442	74435809	+	74433187	74435809	A5SS	0.25	50	50	ENSMUST00000189353.7	ENSMUSG00000034730.18	Adgrb1	chr15	protein_coding	adhesion G protein-coupled receptor B1
chr15	74435730	74435809	+	74433187	74435809	A5SS	0.25	50	50	ENSMUST00000189353.7	ENSMUSG00000034730.18	Adgrb1	chr15	protein_coding	adhesion G protein-coupled receptor B1
chr15	74435730	74435809	+	74435442	74435809	A5SS	0.25	50	50	ENSMUST00000190524.7	ENSMUSG00000034730.18	Adgrb1	chr15	protein_coding	adhesion G protein-coupled receptor B1
chr15	74446017	74452414	+	74446017	74447688	A3SS&ES	0.5	50	50	ENSMUST00000186095.2	ENSMUSG00000034730.18	Adgrb1	chr15	protein_coding	adhesion G protein-coupled receptor B1
chr15	74447773	74449244	+	74447773	74452514	A3SS	0.33	50	50	ENSMUST00000186095.2	ENSMUSG00000034730.18	Adgrb1	chr15	protein_coding	adhesion G protein-coupled receptor B1
chr15	74498249;74498884	74498738;74499460	-	74498249	74499460	cassetteExon	0.5	100	100	ENSMUST00000137963.8	ENSMUSG00000022603.10	Mroh4	chr15	protein_coding	maestro heat-like repeat family member 4
chr15	74501351	74506491	-	74500168	74506491	A3SS	0.33	50	50	ENSMUST00000137963.8	ENSMUSG00000022603.10	Mroh4	chr15	protein_coding	maestro heat-like repeat family member 4
chr15	74503533	74506491	-	74500168	74506491	A3SS	0.33	50	50	ENSMUST00000137963.8	ENSMUSG00000022603.10	Mroh4	chr15	protein_coding	maestro heat-like repeat family member 4
chr15	74503533	74506491	-	74501351	74506491	A3SS	0.33	50	50	ENSMUST00000023271.8	ENSMUSG00000022603.10	Mroh4	chr15	protein_coding	maestro heat-like repeat family member 4
chr15	74542165	74542414	-	74542168	74542414	A3SS	0.5	50	50	ENSMUST00000023268.14	ENSMUSG00000022602.15	Arc	chr15	protein_coding	activity regulated cytoskeletal-associated protein
chr15	74599450;74599606	74599533;74599790	-	74599450	74599790	cassetteExon	0.5	100	100	ENSMUST00000190433.2	ENSMUSG00000022596.4	Slurp1	chr15	protein_coding	secreted Ly6/Plaur domain containing 1
chr15	74623886;74624054	74623982;74624734	-	74623886	74624734	cassetteExon	0.5	100	100	ENSMUST00000023259.15	ENSMUSG00000022594.15	Lynx1	chr15	protein_coding	Ly6/neurotoxin 1
chr15	74644178	74650636	-	74644178;74647306	74647208;74650636	ES	0.5	50	50	ENSMUST00000186014.2	ENSMUSG00000101026.2	Ly6g6g	chr15	protein_coding	lymphocyte antigen 6 complex, locus G6G
chr15	74693233	74706436	+	74693233	74695843	3pMXE	0.5	50	50	ENSMUST00000096399.8	ENSMUSG00000068600.11	Gml2	chr15	protein_coding	glycosylphosphatidylinositol anchored molecule like 2
chr15	74691030	74692381	+	74691030	74692397	A3SS	0.5	50	50	ENSMUST00000096399.8	ENSMUSG00000068600.11	Gml2	chr15	protein_coding	glycosylphosphatidylinositol anchored molecule like 2
chr15	74695158	74695843	+	74693233	74695843	A5SS	0.33	50	50	ENSMUST00000096399.8	ENSMUSG00000068600.11	Gml2	chr15	protein_coding	glycosylphosphatidylinositol anchored molecule like 2
chr15	74695196	74695843	+	74693233	74695843	A5SS	0.33	50	50	ENSMUST00000096399.8	ENSMUSG00000068600.11	Gml2	chr15	protein_coding	glycosylphosphatidylinositol anchored molecule like 2
chr15	74695158	74695843	+	74695196	74695843	A5SS	0.33	50	50	ENSMUST00000188458.7	ENSMUSG00000068600.11	Gml2	chr15	protein_coding	glycosylphosphatidylinositol anchored molecule like 2
chr15	74752622	74753463	-	74752622	74768805	A5SS	0.5	50	50	ENSMUST00000190826.2	ENSMUSG00000063522.6	Ly6m	chr15	protein_coding	lymphocyte antigen 6 complex, locus M
chr15	74827184	74829626	+	74827184;74827566	74827416;74829626	ES	0.25	50	50	ENSMUST00000188866.7	ENSMUSG00000022587.15	Ly6e	chr15	protein_coding	lymphocyte antigen 6 complex, locus E
chr15	74827566;74829312	74829264;74829626	+	74827566	74829626	cassetteExon	0.5	100	100	ENSMUST00000188866.7	ENSMUSG00000022587.15	Ly6e	chr15	protein_coding	lymphocyte antigen 6 complex, locus E
chr15	74827184	74827332	+	74827184	74827416	A3SS	0.2	50	50	ENSMUST00000188866.7	ENSMUSG00000022587.15	Ly6e	chr15	protein_coding	lymphocyte antigen 6 complex, locus E
chr15	74827184	74827457	+	74827184	74827416	A3SS	0.2	50	50	ENSMUST00000188866.7	ENSMUSG00000022587.15	Ly6e	chr15	protein_coding	lymphocyte antigen 6 complex, locus E
chr15	74827184	74829629	+	74827184	74827416	A3SS&ES	0.2	50	50	ENSMUST00000188866.7	ENSMUSG00000022587.15	Ly6e	chr15	protein_coding	lymphocyte antigen 6 complex, locus E
chr15	74827566	74829629	+	74827566	74829626	A3SS	0.33	50	50	ENSMUST00000188866.7	ENSMUSG00000022587.15	Ly6e	chr15	protein_coding	lymphocyte antigen 6 complex, locus E
chr15	74828562	74829626	+	74827566	74829626	A5SS	0.25	50	50	ENSMUST00000188866.7	ENSMUSG00000022587.15	Ly6e	chr15	protein_coding	lymphocyte antigen 6 complex, locus E
chr15	74827184	74829626	+	74827184;74827566	74827332;74829626	ES	0.25	50	50	ENSMUST00000169343.8	ENSMUSG00000022587.15	Ly6e	chr15	protein_coding	lymphocyte antigen 6 complex, locus E
chr15	74827184	74827457	+	74827184	74827332	A3SS	0.2	50	50	ENSMUST00000169343.8	ENSMUSG00000022587.15	Ly6e	chr15	protein_coding	lymphocyte antigen 6 complex, locus E
chr15	74827184	74829629	+	74827184	74827332	A3SS&ES	0.2	50	50	ENSMUST00000169343.8	ENSMUSG00000022587.15	Ly6e	chr15	protein_coding	lymphocyte antigen 6 complex, locus E
chr15	74827184	74829626	+	74827566	74829626	A5SS	0.25	50	50	ENSMUST00000051698.14	ENSMUSG00000022587.15	Ly6e	chr15	protein_coding	lymphocyte antigen 6 complex, locus E
chr15	74827184;74827566	74827457;74829626	+	74827184	74829626	cassetteExon	0.5	100	100	ENSMUST00000187606.7	ENSMUSG00000022587.15	Ly6e	chr15	protein_coding	lymphocyte antigen 6 complex, locus E
chr15	74827184	74829629	+	74827184	74829626	A3SS	0.2	50	50	ENSMUST00000187606.7	ENSMUSG00000022587.15	Ly6e	chr15	protein_coding	lymphocyte antigen 6 complex, locus E
chr15	74828562	74829626	+	74827184	74829626	A5SS	0.25	50	50	ENSMUST00000187606.7	ENSMUSG00000022587.15	Ly6e	chr15	protein_coding	lymphocyte antigen 6 complex, locus E
chr15	74829312	74829626	+	74827184	74829626	A5SS	0.25	50	50	ENSMUST00000187606.7	ENSMUSG00000022587.15	Ly6e	chr15	protein_coding	lymphocyte antigen 6 complex, locus E
chr15	74827566;74829312	74829264;74829629	+	74827566	74829629	cassetteExon	0.5	100	100	ENSMUST00000189186.7	ENSMUSG00000022587.15	Ly6e	chr15	protein_coding	lymphocyte antigen 6 complex, locus E
chr15	74827184	74829629	+	74827566	74829629	A5SS	0.33	50	50	ENSMUST00000189186.7	ENSMUSG00000022587.15	Ly6e	chr15	protein_coding	lymphocyte antigen 6 complex, locus E
chr15	74827184;74827566	74827332;74829629	+	74827184	74829629	cassetteExon	0.5	100	100	ENSMUST00000187284.7	ENSMUSG00000022587.15	Ly6e	chr15	protein_coding	lymphocyte antigen 6 complex, locus E
chr15	74827184;74827566	74827416;74829629	+	74827184	74829629	cassetteExon	0.5	100	100	ENSMUST00000187284.7	ENSMUSG00000022587.15	Ly6e	chr15	protein_coding	lymphocyte antigen 6 complex, locus E
chr15	74827184;74827566	74827457;74829629	+	74827184	74829629	cassetteExon	0.5	100	100	ENSMUST00000187284.7	ENSMUSG00000022587.15	Ly6e	chr15	protein_coding	lymphocyte antigen 6 complex, locus E
chr15	74829312	74829629	+	74827184	74829629	A5SS	0.33	50	50	ENSMUST00000187284.7	ENSMUSG00000022587.15	Ly6e	chr15	protein_coding	lymphocyte antigen 6 complex, locus E
chr15	74827184	74829626	+	74827184	74827332	A3SS&ES	0.2	50	50	ENSMUST00000185861.7	ENSMUSG00000022587.15	Ly6e	chr15	protein_coding	lymphocyte antigen 6 complex, locus E
chr15	74827566	74829629	+	74827566	74829264	A3SS&ES	0.33	50	50	ENSMUST00000185863.7	ENSMUSG00000022587.15	Ly6e	chr15	protein_coding	lymphocyte antigen 6 complex, locus E
chr15	74829312	74829629	+	74829312	74829626	A3SS	0.5	50	50	ENSMUST00000185863.7	ENSMUSG00000022587.15	Ly6e	chr15	protein_coding	lymphocyte antigen 6 complex, locus E
chr15	74828562	74829626	+	74829312	74829626	A5SS&ES	0.25	50	50	ENSMUST00000185863.7	ENSMUSG00000022587.15	Ly6e	chr15	protein_coding	lymphocyte antigen 6 complex, locus E
chr15	74827184	74829629	+	74827184	74827457	A3SS&ES	0.2	50	50	ENSMUST00000191127.7	ENSMUSG00000022587.15	Ly6e	chr15	protein_coding	lymphocyte antigen 6 complex, locus E
chr15	74827566	74829626	+	74827566	74829264	A3SS&ES	0.33	50	50	ENSMUST00000191145.7	ENSMUSG00000022587.15	Ly6e	chr15	protein_coding	lymphocyte antigen 6 complex, locus E
chr15	74869466	74869697	-	74869481	74869697	A3SS	0.5	50	50	ENSMUST00000189068.7	ENSMUSG00000075602.11	Ly6a	chr15	protein_coding	lymphocyte antigen 6 complex, locus A
chr15	74869481	74869728	-	74869481	74869697	A5SS	0.5	50	50	ENSMUST00000189068.7	ENSMUSG00000075602.11	Ly6a	chr15	protein_coding	lymphocyte antigen 6 complex, locus A
chr15	74869481	74869728	-	74869466	74869728	A3SS	0.5	50	50	ENSMUST00000187994.7	ENSMUSG00000075602.11	Ly6a	chr15	protein_coding	lymphocyte antigen 6 complex, locus A
chr15	74869466	74869697	-	74869466	74869728	A5SS	0.5	50	50	ENSMUST00000187994.7	ENSMUSG00000075602.11	Ly6a	chr15	protein_coding	lymphocyte antigen 6 complex, locus A
chr15	74917689	74919202	-	74917459	74919202	A3SS	0.5	50	50	ENSMUST00000188845.7	ENSMUSG00000079018.11	Ly6c1	chr15	protein_coding	lymphocyte antigen 6 complex, locus C1
chr15	74920388	74920634	-	74920373	74920634	A3SS	0.5	50	50	ENSMUST00000188845.7	ENSMUSG00000079018.11	Ly6c1	chr15	protein_coding	lymphocyte antigen 6 complex, locus C1
chr15	74920373	74920603	-	74920373	74920634	A5SS	0.5	50	50	ENSMUST00000188845.7	ENSMUSG00000079018.11	Ly6c1	chr15	protein_coding	lymphocyte antigen 6 complex, locus C1
chr15	74920388	74920603	-	74920388	74920634	A5SS	0.5	50	50	ENSMUST00000179762.8	ENSMUSG00000079018.11	Ly6c1	chr15	protein_coding	lymphocyte antigen 6 complex, locus C1
chr15	74920388	74920603	-	74920373	74920603	A3SS	0.5	50	50	ENSMUST00000187347.7	ENSMUSG00000079018.11	Ly6c1	chr15	protein_coding	lymphocyte antigen 6 complex, locus C1
chr15	74983529	74983758	-	74983529	74983789	A5SS	0.5	50	50	ENSMUST00000100542.10	ENSMUSG00000022584.15	Ly6c2	chr15	protein_coding	lymphocyte antigen 6 complex, locus C2
chr15	75003741	75005542	-	75003741	75005538	A5SS	0.5	50	50	ENSMUST00000187250.2	ENSMUSG00000102051.2	Ly6a2	chr15	transcribed_unprocessed_pseudogene	lymphocyte antigen 6 complex, locus A2
chr15	75005654	75006600	-	75005654	75006604	A5SS	0.5	50	50	ENSMUST00000187250.2	ENSMUSG00000102051.2	Ly6a2	chr15	transcribed_unprocessed_pseudogene	lymphocyte antigen 6 complex, locus A2
chr15	75088292	75088533	+	75088261	75088533	A5SS	0.5	50	50	ENSMUST00000185307.7	ENSMUSG00000047728.14	Ly6g2	chr15	protein_coding	lymphocyte antigen 6 complex, locus G2
chr15	75092639	75093487	+	75092689	75093487	A5SS	0.5	50	50	ENSMUST00000185307.7	ENSMUSG00000047728.14	Ly6g2	chr15	protein_coding	lymphocyte antigen 6 complex, locus G2
chr15	75301872	75303216	-	75301877	75303216	A3SS	0.5	50	50	ENSMUST00000096397.3	ENSMUSG00000053168.7	9030619P08Rik	chr15	transcribed_unprocessed_pseudogene	RIKEN cDNA 9030619P08 gene
chr15	75300027	75300608	-	75300027	75301799	A5SS	0.33	50	50	ENSMUST00000096397.3	ENSMUSG00000053168.7	9030619P08Rik	chr15	transcribed_unprocessed_pseudogene	RIKEN cDNA 9030619P08 gene
chr15	75300027	75301767	-	75300027	75301799	A5SS	0.33	50	50	ENSMUST00000096397.3	ENSMUSG00000053168.7	9030619P08Rik	chr15	transcribed_unprocessed_pseudogene	RIKEN cDNA 9030619P08 gene
chr15	75300027;75300653	75300608;75301767	-	75300027	75301767	cassetteExon	0.5	100	100	ENSMUST00000227495.2	ENSMUSG00000053168.7	9030619P08Rik	chr15	transcribed_unprocessed_pseudogene	RIKEN cDNA 9030619P08 gene
chr15	75438108	75438563	-	75438108	75438441	5pMXE	0.33	50	50	ENSMUST00000163116.8	ENSMUSG00000022577.18	Ly6h	chr15	protein_coding	lymphocyte antigen 6 complex, locus H
chr15	75438108	75438612	-	75438108	75438441	5pMXE	0.33	50	50	ENSMUST00000163116.8	ENSMUSG00000022577.18	Ly6h	chr15	protein_coding	lymphocyte antigen 6 complex, locus H
chr15	75438108	75438563	-	75438108	75438612	A5SS	0.33	50	50	ENSMUST00000127095.8	ENSMUSG00000022577.18	Ly6h	chr15	protein_coding	lymphocyte antigen 6 complex, locus H
chr15	75469478	75469579	+	75469478	75469940	A3SS	0.33	50	50	ENSMUST00000189944.7	ENSMUSG00000022579.11	Gpihbp1	chr15	protein_coding	GPI-anchored HDL-binding protein 1
chr15	75469478	75469996	+	75469478	75469940	A3SS	0.33	50	50	ENSMUST00000189944.7	ENSMUSG00000022579.11	Gpihbp1	chr15	protein_coding	GPI-anchored HDL-binding protein 1
chr15	75469478	75469996	+	75469478	75469579	A3SS	0.33	50	50	ENSMUST00000023243.11	ENSMUSG00000022579.11	Gpihbp1	chr15	protein_coding	GPI-anchored HDL-binding protein 1
chr15	75488780	75489893	+	75488669	75489893	A5SS	0.33	50	50	ENSMUST00000161785.8	ENSMUSG00000047003.16	Zfp41	chr15	protein_coding	zinc finger protein 41
chr15	75488877	75489893	+	75488669	75489893	A5SS	0.33	50	50	ENSMUST00000161785.8	ENSMUSG00000047003.16	Zfp41	chr15	protein_coding	zinc finger protein 41
chr15	75493879	75495400	+	75491540	75495400	A5SS	0.5	50	50	ENSMUST00000161785.8	ENSMUSG00000047003.16	Zfp41	chr15	protein_coding	zinc finger protein 41
chr15	75488780	75489893	+	75488877	75489893	A5SS	0.33	50	50	ENSMUST00000054555.10	ENSMUSG00000047003.16	Zfp41	chr15	protein_coding	zinc finger protein 41
chr15	75514360	75515836	+	75514360	75517198	A3SS	0.5	50	50	ENSMUST00000183928.8	ENSMUSG00000099034.8	2810039B14Rik	chr15	transcribed_unitary_pseudogene	RIKEN cDNA 2810039B14 gene
chr15	75515450	75517198	+	75514360	75517198	A5SS	0.5	50	50	ENSMUST00000183928.8	ENSMUSG00000099034.8	2810039B14Rik	chr15	transcribed_unitary_pseudogene	RIKEN cDNA 2810039B14 gene
chr15	75538229	75539269	-	75538170	75539269	A3SS	0.5	50	50	ENSMUST00000000958.9	ENSMUSG00000000934.10	Top1mt	chr15	protein_coding	DNA topoisomerase 1, mitochondrial
chr15	75582681	75582847	+	75582681	75582837	A3SS	0.33	50	50	ENSMUST00000121137.9	ENSMUSG00000022580.14	Rhpn1	chr15	protein_coding	rhophilin, Rho GTPase binding protein 1
chr15	75582681	75582920	+	75582681	75582837	A3SS	0.33	50	50	ENSMUST00000121137.9	ENSMUSG00000022580.14	Rhpn1	chr15	protein_coding	rhophilin, Rho GTPase binding protein 1
chr15	75583747	75584141	+	75583747	75584106	A3SS	0.5	50	50	ENSMUST00000121137.9	ENSMUSG00000022580.14	Rhpn1	chr15	protein_coding	rhophilin, Rho GTPase binding protein 1
chr15	75584873	75585068	+	75584927	75585068	A5SS	0.5	50	50	ENSMUST00000121137.9	ENSMUSG00000022580.14	Rhpn1	chr15	protein_coding	rhophilin, Rho GTPase binding protein 1
chr15	75582681	75582920	+	75582681	75582847	A3SS	0.33	50	50	ENSMUST00000124749.8	ENSMUSG00000022580.14	Rhpn1	chr15	protein_coding	rhophilin, Rho GTPase binding protein 1
chr15	75681527	75684631	-	75681527	75709316	A5SS	0.33	50	50	ENSMUST00000100538.4	ENSMUSG00000075600.4	Zc3h3	chr15	protein_coding	zinc finger CCCH type containing 3
chr15	75681527	75699997	-	75681527	75709316	A5SS	0.33	50	50	ENSMUST00000100538.4	ENSMUSG00000075600.4	Zc3h3	chr15	protein_coding	zinc finger CCCH type containing 3
chr15	75681527	75684631	-	75681527	75699997	A5SS	0.33	50	50	ENSMUST00000229970.2	ENSMUSG00000075600.4	Zc3h3	chr15	protein_coding	zinc finger CCCH type containing 3
chr15	75734330	75735158	+	75734330	75735254	A3SS	0.5	50	50	ENSMUST00000023238.6	ENSMUSG00000022575.6	Gsdmd	chr15	protein_coding	gasdermin D
chr15	75735477	75736204	+	75735477	75736093	A3SS	0.5	50	50	ENSMUST00000023238.6	ENSMUSG00000022575.6	Gsdmd	chr15	protein_coding	gasdermin D
chr15	75763713	75764191	-	75763713;75763896	75763812;75764191	ES	0.5	50	50	ENSMUST00000023237.8	ENSMUSG00000022574.8	Naprt	chr15	protein_coding	nicotinate phosphoribosyltransferase
chr15	75763713	75764191	-	75763713	75763812	A5SS	0.5	50	50	ENSMUST00000230259.2	ENSMUSG00000022574.8	Naprt	chr15	protein_coding	nicotinate phosphoribosyltransferase
chr15	75768768	75772981	-	75768768;75772611	75772540;75772981	ES	0.25	50	50	ENSMUST00000154584.9	ENSMUSG00000055762.17	Eef1d	chr15	protein_coding	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
chr15	75773104	75781309	-	75773104	75781094	5pMXE	0.33	50	50	ENSMUST00000154584.9	ENSMUSG00000055762.17	Eef1d	chr15	protein_coding	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
chr15	75768768;75769131	75769075;75772540	-	75768768	75772540	cassetteExon	0.5	100	100	ENSMUST00000154584.9	ENSMUSG00000055762.17	Eef1d	chr15	protein_coding	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
chr15	75768768;75769131	75769075;75772981	-	75768768;75772611	75772540;75772981	MXE	0.5	100	100	ENSMUST00000154584.9	ENSMUSG00000055762.17	Eef1d	chr15	protein_coding	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
chr15	75773101	75781094	-	75773104	75781094	A3SS	0.2	50	50	ENSMUST00000154584.9	ENSMUSG00000055762.17	Eef1d	chr15	protein_coding	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
chr15	75775657	75781094	-	75773104	75781094	A3SS	0.2	50	50	ENSMUST00000154584.9	ENSMUSG00000055762.17	Eef1d	chr15	protein_coding	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
chr15	75775667	75781094	-	75773104	75781094	A3SS	0.2	50	50	ENSMUST00000154584.9	ENSMUSG00000055762.17	Eef1d	chr15	protein_coding	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
chr15	75777749	75781094	-	75773104	75781094	A3SS	0.2	50	50	ENSMUST00000154584.9	ENSMUSG00000055762.17	Eef1d	chr15	protein_coding	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
chr15	75773104	75774528	-	75773104	75781094	A5SS	0.33	50	50	ENSMUST00000154584.9	ENSMUSG00000055762.17	Eef1d	chr15	protein_coding	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
chr15	75768768;75769131	75769075;75772981	-	75768768	75772981	cassetteExon	0.5	100	100	ENSMUST00000109972.9	ENSMUSG00000055762.17	Eef1d	chr15	protein_coding	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
chr15	75773104	75781094	-	75773104;75775667	75774528;75781094	ES	0.2	50	50	ENSMUST00000109975.10	ENSMUSG00000055762.17	Eef1d	chr15	protein_coding	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
chr15	75773101	75781094	-	75775667	75781094	A3SS&ES	0.2	50	50	ENSMUST00000109975.10	ENSMUSG00000055762.17	Eef1d	chr15	protein_coding	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
chr15	75775657	75781094	-	75775667	75781094	A3SS	0.2	50	50	ENSMUST00000109975.10	ENSMUSG00000055762.17	Eef1d	chr15	protein_coding	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
chr15	75777749	75781094	-	75775667	75781094	A3SS	0.2	50	50	ENSMUST00000109975.10	ENSMUSG00000055762.17	Eef1d	chr15	protein_coding	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
chr15	75773104	75781309	-	75773104	75774528	5pMXE	0.33	50	50	ENSMUST00000137426.8	ENSMUSG00000055762.17	Eef1d	chr15	protein_coding	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
chr15	75775657	75781094	-	75773101	75781094	A3SS	0.2	50	50	ENSMUST00000116440.9	ENSMUSG00000055762.17	Eef1d	chr15	protein_coding	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
chr15	75777749	75781094	-	75773101	75781094	A3SS	0.2	50	50	ENSMUST00000116440.9	ENSMUSG00000055762.17	Eef1d	chr15	protein_coding	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
chr15	75768313;75768768	75768489;75772981	-	75768313	75772981	cassetteExon	0.5	100	100	ENSMUST00000151066.8	ENSMUSG00000055762.17	Eef1d	chr15	protein_coding	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
chr15	75769131	75772981	-	75768313	75772981	A3SS	0.25	50	50	ENSMUST00000151066.8	ENSMUSG00000055762.17	Eef1d	chr15	protein_coding	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
chr15	75772611	75772981	-	75768313	75772981	A3SS	0.25	50	50	ENSMUST00000151066.8	ENSMUSG00000055762.17	Eef1d	chr15	protein_coding	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
chr15	75769131;75772611	75772540;75772981	-	75769131	75772981	cassetteExon	0.5	100	100	ENSMUST00000089680.10	ENSMUSG00000055762.17	Eef1d	chr15	protein_coding	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
chr15	75775657	75781094	-	75775657;75777749	75777735;75781094	ES	0.2	50	50	ENSMUST00000089681.12	ENSMUSG00000055762.17	Eef1d	chr15	protein_coding	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
chr15	75777749	75781309	-	75777749	75781094	5pMXE	0.5	50	50	ENSMUST00000089681.12	ENSMUSG00000055762.17	Eef1d	chr15	protein_coding	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
chr15	75775657	75777185	-	75775657	75777735	A5SS	0.33	50	50	ENSMUST00000089681.12	ENSMUSG00000055762.17	Eef1d	chr15	protein_coding	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
chr15	75777749	75781309	-	75773104	75781309	A3SS	0.5	50	50	ENSMUST00000144614.8	ENSMUSG00000055762.17	Eef1d	chr15	protein_coding	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
chr15	75768768	75772981	-	75772611	75772981	3pMXE	0.25	50	50	ENSMUST00000055220.7	ENSMUSG00000055762.17	Eef1d	chr15	protein_coding	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
chr15	75769131	75772981	-	75772611	75772981	3pMXE	0.25	50	50	ENSMUST00000055220.7	ENSMUSG00000055762.17	Eef1d	chr15	protein_coding	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
chr15	75775657	75781094	-	75775657	75777735	A5SS&ES	0.33	50	50	ENSMUST00000141475.2	ENSMUSG00000055762.17	Eef1d	chr15	protein_coding	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
chr15	75775657	75781094	-	75775657	75777185	5pMXE	0.33	50	50	ENSMUST00000127550.2	ENSMUSG00000055762.17	Eef1d	chr15	protein_coding	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
chr15	75798290	75798648	-	75798306	75798648	A3SS	0.5	50	50	ENSMUST00000230610.2	ENSMUSG00000022570.8	Gfus	chr15	protein_coding	GDP-L-fucose synthase
chr15	75798944	75800278	-	75799047	75800278	A3SS	0.5	50	50	ENSMUST00000230610.2	ENSMUSG00000022570.8	Gfus	chr15	protein_coding	GDP-L-fucose synthase
chr15	75798944	75800741	-	75800392	75800741	A3SS&ES	0.25	50	50	ENSMUST00000230610.2	ENSMUSG00000022570.8	Gfus	chr15	protein_coding	GDP-L-fucose synthase
chr15	75798972	75800741	-	75800392	75800741	A3SS&ES	0.25	50	50	ENSMUST00000230610.2	ENSMUSG00000022570.8	Gfus	chr15	protein_coding	GDP-L-fucose synthase
chr15	75800361	75800741	-	75800392	75800741	A3SS	0.25	50	50	ENSMUST00000230610.2	ENSMUSG00000022570.8	Gfus	chr15	protein_coding	GDP-L-fucose synthase
chr15	75798042	75798139	-	75798042	75798173	A5SS	0.5	50	50	ENSMUST00000230610.2	ENSMUSG00000022570.8	Gfus	chr15	protein_coding	GDP-L-fucose synthase
chr15	75798306	75798592	-	75798306	75798648	A5SS	0.5	50	50	ENSMUST00000230610.2	ENSMUSG00000022570.8	Gfus	chr15	protein_coding	GDP-L-fucose synthase
chr15	75798944	75800741	-	75798944;75800392	75800278;75800741	ES	0.25	50	50	ENSMUST00000229951.2	ENSMUSG00000022570.8	Gfus	chr15	protein_coding	GDP-L-fucose synthase
chr15	75800898	75801568	-	75800898	75801502	A5SS	0.5	50	50	ENSMUST00000229951.2	ENSMUSG00000022570.8	Gfus	chr15	protein_coding	GDP-L-fucose synthase
chr15	75798944	75800741	-	75798944;75800361	75800278;75800741	ES	0.25	50	50	ENSMUST00000229085.2	ENSMUSG00000022570.8	Gfus	chr15	protein_coding	GDP-L-fucose synthase
chr15	75798972	75800741	-	75800361	75800741	A3SS&ES	0.25	50	50	ENSMUST00000229085.2	ENSMUSG00000022570.8	Gfus	chr15	protein_coding	GDP-L-fucose synthase
chr15	75798944	75800741	-	75798972	75800741	A3SS	0.25	50	50	ENSMUST00000229289.2	ENSMUSG00000022570.8	Gfus	chr15	protein_coding	GDP-L-fucose synthase
chr15	75841253	75844901	+	75841253	75844931	A3SS	0.33	50	50	ENSMUST00000109966.8	ENSMUSG00000034429.16	Zfp707	chr15	protein_coding	zinc finger protein 707
chr15	75841253	75844972	+	75841253	75844931	A3SS	0.33	50	50	ENSMUST00000109966.8	ENSMUSG00000034429.16	Zfp707	chr15	protein_coding	zinc finger protein 707
chr15	75841583	75844931	+	75841253	75844931	A5SS	0.5	50	50	ENSMUST00000109966.8	ENSMUSG00000034429.16	Zfp707	chr15	protein_coding	zinc finger protein 707
chr15	75841253	75844901	+	75841253	75844972	A3SS	0.33	50	50	ENSMUST00000109967.10	ENSMUSG00000034429.16	Zfp707	chr15	protein_coding	zinc finger protein 707
chr15	75867173	75867676	+	75867173	75867635	3pMXE	0.5	50	50	ENSMUST00000161961.2	ENSMUSG00000063704.14	Mapk15	chr15	protein_coding	mitogen-activated protein kinase 15
chr15	75869556	75869908	+	75869556;75869782	75869677;75869908	ES	0.5	50	50	ENSMUST00000089669.6	ENSMUSG00000063704.14	Mapk15	chr15	protein_coding	mitogen-activated protein kinase 15
chr15	75870527	75870610	+	75870527	75870628	A3SS	0.5	50	50	ENSMUST00000089669.6	ENSMUSG00000063704.14	Mapk15	chr15	protein_coding	mitogen-activated protein kinase 15
chr15	75868801	75868960	+	75868363	75868960	A5SS	0.5	50	50	ENSMUST00000089669.6	ENSMUSG00000063704.14	Mapk15	chr15	protein_coding	mitogen-activated protein kinase 15
chr15	75870108	75870220	+	75870112	75870220	A5SS	0.5	50	50	ENSMUST00000089669.6	ENSMUSG00000063704.14	Mapk15	chr15	protein_coding	mitogen-activated protein kinase 15
chr15	75878411	75884646	-	75878411	75881223	5pMXE	0.33	50	50	ENSMUST00000170153.2	ENSMUSG00000046761.14	Fam83h	chr15	protein_coding	family with sequence similarity 83, member H
chr15	75878411	75886093	-	75878411	75881223	5pMXE	0.33	50	50	ENSMUST00000170153.2	ENSMUSG00000046761.14	Fam83h	chr15	protein_coding	family with sequence similarity 83, member H
chr15	75878411	75886093	-	75878411	75884646	5pMXE	0.33	50	50	ENSMUST00000238313.2	ENSMUSG00000046761.14	Fam83h	chr15	protein_coding	family with sequence similarity 83, member H
chr15	75881794;75883273	75883185;75886752	+	75881794	75886752	cassetteExon	0.5	100	100	ENSMUST00000185810.8	ENSMUSG00000102018.9	Iqank1	chr15	protein_coding	IQ motif and ankyrin repeat containing 1
chr15	75886551	75886752	+	75881794	75886752	A5SS	0.33	50	50	ENSMUST00000185810.8	ENSMUSG00000102018.9	Iqank1	chr15	protein_coding	IQ motif and ankyrin repeat containing 1
chr15	75917647	75918123	+	75917647;75918018	75917910;75918123	ES	0.5	50	50	ENSMUST00000187868.3	ENSMUSG00000102018.9	Iqank1	chr15	protein_coding	IQ motif and ankyrin repeat containing 1
chr15	75906925	75909619	+	75906925	75917158	A3SS	0.5	50	50	ENSMUST00000187868.3	ENSMUSG00000102018.9	Iqank1	chr15	protein_coding	IQ motif and ankyrin repeat containing 1
chr15	75886551	75886752	+	75883273	75886752	A5SS	0.33	50	50	ENSMUST00000187868.3	ENSMUSG00000102018.9	Iqank1	chr15	protein_coding	IQ motif and ankyrin repeat containing 1
chr15	75921150	75921899	-	75921150;75921389	75921306;75921899	ES	0.5	50	50	ENSMUST00000136390.8	ENSMUSG00000022568.18	Scrib	chr15	protein_coding	scribbled planar cell polarity
chr15	75919521;75919845	75919771;75919964	-	75919521	75919964	cassetteExon	0.5	100	100	ENSMUST00000136390.8	ENSMUSG00000022568.18	Scrib	chr15	protein_coding	scribbled planar cell polarity
chr15	75933072;75933650	75933588;75934519	-	75933072	75934519	cassetteExon	0.5	100	100	ENSMUST00000136390.8	ENSMUSG00000022568.18	Scrib	chr15	protein_coding	scribbled planar cell polarity
chr15	75920920	75921052	-	75920942	75921052	A3SS	0.5	50	50	ENSMUST00000136390.8	ENSMUSG00000022568.18	Scrib	chr15	protein_coding	scribbled planar cell polarity
chr15	75921961	75922328	-	75921961	75923251	A5SS	0.33	50	50	ENSMUST00000136390.8	ENSMUSG00000022568.18	Scrib	chr15	protein_coding	scribbled planar cell polarity
chr15	75921961	75922529	-	75921961	75923251	A5SS	0.33	50	50	ENSMUST00000136390.8	ENSMUSG00000022568.18	Scrib	chr15	protein_coding	scribbled planar cell polarity
chr15	75919521	75919964	-	75919521	75919771	A5SS	0.5	50	50	ENSMUST00000231218.2	ENSMUSG00000022568.18	Scrib	chr15	protein_coding	scribbled planar cell polarity
chr15	75921961	75922529	-	75921961	75922328	5pMXE	0.33	50	50	ENSMUST00000230104.2	ENSMUSG00000022568.18	Scrib	chr15	protein_coding	scribbled planar cell polarity
chr15	75944417	75947391	-	75944417;75946506	75946456;75947391	ES	0.5	50	50	ENSMUST00000100527.13	ENSMUSG00000002524.18	Puf60	chr15	protein_coding	poly-U binding splicing factor 60
chr15	75949551;75951338	75951076;75952699	-	75949551	75952699	cassetteExon	0.5	100	100	ENSMUST00000100527.13	ENSMUSG00000002524.18	Puf60	chr15	protein_coding	poly-U binding splicing factor 60
chr15	75949551;75951338	75951219;75952699	-	75949551	75952699	cassetteExon	0.5	100	100	ENSMUST00000100527.13	ENSMUSG00000002524.18	Puf60	chr15	protein_coding	poly-U binding splicing factor 60
chr15	75947681	75948210	-	75947681	75949450	A5SS	0.5	50	50	ENSMUST00000100527.13	ENSMUSG00000002524.18	Puf60	chr15	protein_coding	poly-U binding splicing factor 60
chr15	75949551	75952653	-	75949551	75952699	A5SS	0.25	50	50	ENSMUST00000100527.13	ENSMUSG00000002524.18	Puf60	chr15	protein_coding	poly-U binding splicing factor 60
chr15	75949551	75951076	-	75949551	75952653	A5SS	0.25	50	50	ENSMUST00000227316.2	ENSMUSG00000002524.18	Puf60	chr15	protein_coding	poly-U binding splicing factor 60
chr15	75949551	75951219	-	75949551	75952653	A5SS	0.25	50	50	ENSMUST00000227316.2	ENSMUSG00000002524.18	Puf60	chr15	protein_coding	poly-U binding splicing factor 60
chr15	75949551	75951076	-	75949551	75951219	A5SS	0.25	50	50	ENSMUST00000230924.2	ENSMUSG00000002524.18	Puf60	chr15	protein_coding	poly-U binding splicing factor 60
chr15	75944417	75947391	-	75946506	75947391	3pMXE	0.5	50	50	ENSMUST00000230968.2	ENSMUSG00000002524.18	Puf60	chr15	protein_coding	poly-U binding splicing factor 60
chr15	75949551	75952699	-	75949551	75951076	5pMXE	0.25	50	50	ENSMUST00000229496.2	ENSMUSG00000002524.18	Puf60	chr15	protein_coding	poly-U binding splicing factor 60
chr15	75962391	75962487	-	75962375	75962487	A3SS	0.5	50	50	ENSMUST00000227605.2	ENSMUSG00000075590.5	Nrbp2	chr15	protein_coding	nuclear receptor binding protein 2
chr15	75962779	75963079	-	75962779	75963220	A5SS	0.5	50	50	ENSMUST00000227605.2	ENSMUSG00000075590.5	Nrbp2	chr15	protein_coding	nuclear receptor binding protein 2
chr15	76008981	76009415	-	76008981;76009346	76009262;76009415	ES	0.5	50	50	ENSMUST00000146157.8	ENSMUSG00000044361.17	BC024139	chr15	protein_coding	cDNA sequence BC024139
chr15	76004883	76005070	-	76004886	76005070	A3SS	0.5	50	50	ENSMUST00000146157.8	ENSMUSG00000044361.17	BC024139	chr15	protein_coding	cDNA sequence BC024139
chr15	76009765	76010179	-	76009765	76010035	A5SS&ES	0.5	50	50	ENSMUST00000146157.8	ENSMUSG00000044361.17	BC024139	chr15	protein_coding	cDNA sequence BC024139
chr15	76008981	76009415	-	76008981	76009262	A5SS	0.5	50	50	ENSMUST00000226663.2	ENSMUSG00000044361.17	BC024139	chr15	protein_coding	cDNA sequence BC024139
chr15	76062585	76067110	-	76062585;76066099	76062719;76067110	ES	0.5	50	50	ENSMUST00000054449.14	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76078630	76078951	-	76078630;76078773	76078759;76078951	ES	0.5	50	50	ENSMUST00000054449.14	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76084669	-	76079012	76083749	5pMXE	0.09	50	50	ENSMUST00000054449.14	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76089798	-	76079012	76083749	5pMXE	0.09	50	50	ENSMUST00000054449.14	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76092262	-	76079012	76083749	5pMXE	0.09	50	50	ENSMUST00000054449.14	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76092624	-	76079012	76083749	5pMXE	0.09	50	50	ENSMUST00000054449.14	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76093165	-	76079012	76083749	5pMXE	0.09	50	50	ENSMUST00000054449.14	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76113558	-	76079012	76083749	5pMXE	0.09	50	50	ENSMUST00000054449.14	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76115374	-	76079012	76083749	5pMXE	0.09	50	50	ENSMUST00000054449.14	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76077687;76078201	76078166;76078541	-	76077687	76078541	cassetteExon	0.5	100	100	ENSMUST00000054449.14	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76079624	-	76079012	76083749	A5SS	0.09	50	50	ENSMUST00000054449.14	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76082180	-	76079012	76083749	A5SS	0.09	50	50	ENSMUST00000054449.14	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76083494	-	76079012	76083749	A5SS	0.09	50	50	ENSMUST00000054449.14	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76092262	-	76079012	76089798	5pMXE	0.09	50	50	ENSMUST00000073418.13	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76092624	-	76079012	76089798	5pMXE	0.09	50	50	ENSMUST00000073418.13	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76093165	-	76079012	76089798	5pMXE	0.09	50	50	ENSMUST00000073418.13	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76113558	-	76079012	76089798	5pMXE	0.09	50	50	ENSMUST00000073418.13	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76115374	-	76079012	76089798	5pMXE	0.09	50	50	ENSMUST00000073418.13	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76079624	-	76079012	76089798	A5SS	0.09	50	50	ENSMUST00000073418.13	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76082180	-	76079012	76089798	A5SS	0.09	50	50	ENSMUST00000073418.13	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76083494	-	76079012	76089798	A5SS	0.09	50	50	ENSMUST00000073418.13	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76084669	-	76079012	76089798	A5SS	0.09	50	50	ENSMUST00000073418.13	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76092624	-	76079012	76092262	5pMXE	0.09	50	50	ENSMUST00000080857.12	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76093165	-	76079012	76092262	5pMXE	0.09	50	50	ENSMUST00000080857.12	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76113558	-	76079012	76092262	5pMXE	0.09	50	50	ENSMUST00000080857.12	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76115374	-	76079012	76092262	5pMXE	0.09	50	50	ENSMUST00000080857.12	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76079624	-	76079012	76092262	A5SS	0.09	50	50	ENSMUST00000080857.12	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76082180	-	76079012	76092262	A5SS	0.09	50	50	ENSMUST00000080857.12	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76083494	-	76079012	76092262	A5SS	0.09	50	50	ENSMUST00000080857.12	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76084669	-	76079012	76092262	A5SS	0.09	50	50	ENSMUST00000080857.12	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76113558	-	76079012	76093165	5pMXE	0.09	50	50	ENSMUST00000071869.12	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76115374	-	76079012	76093165	5pMXE	0.09	50	50	ENSMUST00000071869.12	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76079624	-	76079012	76093165	A5SS	0.09	50	50	ENSMUST00000071869.12	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76082180	-	76079012	76093165	A5SS	0.09	50	50	ENSMUST00000071869.12	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76083494	-	76079012	76093165	A5SS	0.09	50	50	ENSMUST00000071869.12	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76084669	-	76079012	76093165	A5SS	0.09	50	50	ENSMUST00000071869.12	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76092624	-	76079012	76093165	A5SS	0.09	50	50	ENSMUST00000071869.12	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76079624	-	76079012	76115374	A5SS	0.09	50	50	ENSMUST00000089610.10	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76082180	-	76079012	76115374	A5SS	0.09	50	50	ENSMUST00000089610.10	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76083494	-	76079012	76115374	A5SS	0.09	50	50	ENSMUST00000089610.10	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76084669	-	76079012	76115374	A5SS	0.09	50	50	ENSMUST00000089610.10	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76092624	-	76079012	76115374	A5SS	0.09	50	50	ENSMUST00000089610.10	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76113558	-	76079012	76115374	A5SS	0.09	50	50	ENSMUST00000089610.10	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76079624	-	76079012	76113558	A5SS	0.09	50	50	ENSMUST00000074834.12	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76082180	-	76079012	76113558	A5SS	0.09	50	50	ENSMUST00000074834.12	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76083494	-	76079012	76113558	A5SS	0.09	50	50	ENSMUST00000074834.12	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76084669	-	76079012	76113558	A5SS	0.09	50	50	ENSMUST00000074834.12	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76092624	-	76079012	76113558	A5SS	0.09	50	50	ENSMUST00000074834.12	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76082180	-	76079012	76079624	5pMXE	0.09	50	50	ENSMUST00000023226.13	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76083494	-	76079012	76079624	5pMXE	0.09	50	50	ENSMUST00000023226.13	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76084669	-	76079012	76079624	5pMXE	0.09	50	50	ENSMUST00000023226.13	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76092624	-	76079012	76079624	5pMXE	0.09	50	50	ENSMUST00000023226.13	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76083494	-	76079012	76082180	5pMXE	0.09	50	50	ENSMUST00000072692.11	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76084669	-	76079012	76082180	5pMXE	0.09	50	50	ENSMUST00000072692.11	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76092624	-	76079012	76082180	5pMXE	0.09	50	50	ENSMUST00000072692.11	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76084669	-	76079012	76083494	5pMXE	0.09	50	50	ENSMUST00000169438.8	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76092624	-	76079012	76083494	5pMXE	0.09	50	50	ENSMUST00000169438.8	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76079012	76092624	-	76079012	76084669	5pMXE	0.09	50	50	ENSMUST00000169108.8	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76066099	76067110	-	76062585	76067110	A3SS	0.5	50	50	ENSMUST00000165210.8	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76062585	76062719	-	76062585	76067110	A5SS	0.5	50	50	ENSMUST00000165210.8	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76115578	76116728	-	76115578	76116139	5pMXE	0.33	50	50	ENSMUST00000167754.8	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76115578	76116991	-	76115578	76116139	5pMXE	0.33	50	50	ENSMUST00000167754.8	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76115578	76116991	-	76115578	76116728	5pMXE	0.33	50	50	ENSMUST00000166428.8	ENSMUSG00000022565.16	Plec	chr15	protein_coding	plectin
chr15	76125181	76125356	-	76125131	76125356	A3SS	0.5	50	50	ENSMUST00000165738.8	ENSMUSG00000063268.13	Parp10	chr15	protein_coding	poly (ADP-ribose) polymerase family, member 10
chr15	76118072	76118334	-	76118072	76124249	A5SS	0.5	50	50	ENSMUST00000165738.8	ENSMUSG00000063268.13	Parp10	chr15	protein_coding	poly (ADP-ribose) polymerase family, member 10
chr15	76131100	76132051	+	76131100;76131768	76131729;76132051	ES	0.33	50	50	ENSMUST00000229772.2	ENSMUSG00000022564.8	Grina	chr15	protein_coding	glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
chr15	76131100;76131937	76131840;76132051	+	76131100;76131768	76131729;76132051	MXE	0.5	100	100	ENSMUST00000229772.2	ENSMUSG00000022564.8	Grina	chr15	protein_coding	glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
chr15	76131100	76132051	+	76131100;76131937	76131840;76132051	ES	0.33	50	50	ENSMUST00000230347.2	ENSMUSG00000022564.8	Grina	chr15	protein_coding	glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
chr15	76131100;76131937	76131729;76132051	+	76131100	76132051	cassetteExon	0.5	100	100	ENSMUST00000023225.8	ENSMUSG00000022564.8	Grina	chr15	protein_coding	glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
chr15	76131100	76131840	+	76131100	76131729	A3SS	0.33	50	50	ENSMUST00000229380.2	ENSMUSG00000022564.8	Grina	chr15	protein_coding	glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
chr15	76131768	76132051	+	76131937	76132051	A5SS	0.33	50	50	ENSMUST00000229380.2	ENSMUSG00000022564.8	Grina	chr15	protein_coding	glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
chr15	76151700;76152192	76151956;76152386	-	76151700	76152386	cassetteExon	0.5	100	100	ENSMUST00000231521.2	ENSMUSG00000115946.3	Mirt2	chr15	lncRNA	myocardial infraction associated transcript 2
chr15	76152591	76153821	-	76152591	76153989	A5SS	0.5	50	50	ENSMUST00000231521.2	ENSMUSG00000115946.3	Mirt2	chr15	lncRNA	myocardial infraction associated transcript 2
chr15	76168404	76168800	+	76168404	76168895	A3SS	0.5	50	50	ENSMUST00000074173.4	ENSMUSG00000049653.6	Spatc1	chr15	protein_coding	spermatogenesis and centriole associated 1
chr15	76179491	76179884	+	76179491;76179662	76179590;76179884	ES	0.5	50	50	ENSMUST00000163991.4	ENSMUSG00000071724.6	Smpd5	chr15	protein_coding	sphingomyelin phosphodiesterase 5
chr15	76179491	76179884	+	76179662	76179884	A5SS	0.5	50	50	ENSMUST00000096370.4	ENSMUSG00000071724.6	Smpd5	chr15	protein_coding	sphingomyelin phosphodiesterase 5
chr15	76190898	76191428	-	76190898	76191175	5pMXE	0.25	50	50	ENSMUST00000171340.9	ENSMUSG00000022562.16	Oplah	chr15	protein_coding	5-oxoprolinase (ATP-hydrolysing)
chr15	76190898	76193721	-	76190898	76191175	5pMXE	0.25	50	50	ENSMUST00000171340.9	ENSMUSG00000022562.16	Oplah	chr15	protein_coding	5-oxoprolinase (ATP-hydrolysing)
chr15	76190898	76211628	-	76190898	76191175	5pMXE	0.25	50	50	ENSMUST00000171340.9	ENSMUSG00000022562.16	Oplah	chr15	protein_coding	5-oxoprolinase (ATP-hydrolysing)
chr15	76181907	76185487	-	76185394	76185487	A3SS&ES	0.5	50	50	ENSMUST00000171340.9	ENSMUSG00000022562.16	Oplah	chr15	protein_coding	5-oxoprolinase (ATP-hydrolysing)
chr15	76186639	76186831	-	76186694	76186831	A3SS	0.5	50	50	ENSMUST00000171340.9	ENSMUSG00000022562.16	Oplah	chr15	protein_coding	5-oxoprolinase (ATP-hydrolysing)
chr15	76190898	76193721	-	76190898	76191428	5pMXE	0.25	50	50	ENSMUST00000023222.13	ENSMUSG00000022562.16	Oplah	chr15	protein_coding	5-oxoprolinase (ATP-hydrolysing)
chr15	76190898	76211628	-	76190898	76191428	5pMXE	0.25	50	50	ENSMUST00000023222.13	ENSMUSG00000022562.16	Oplah	chr15	protein_coding	5-oxoprolinase (ATP-hydrolysing)
chr15	76190898	76211628	-	76190898	76193721	5pMXE	0.25	50	50	ENSMUST00000210024.2	ENSMUSG00000022562.16	Oplah	chr15	protein_coding	5-oxoprolinase (ATP-hydrolysing)
chr15	76211867	76213230	+	76211863	76213230	A5SS	0.33	50	50	ENSMUST00000059045.8	ENSMUSG00000034259.9	Exosc4	chr15	protein_coding	exosome component 4
chr15	76212012	76213230	+	76211863	76213230	A5SS	0.33	50	50	ENSMUST00000059045.8	ENSMUSG00000034259.9	Exosc4	chr15	protein_coding	exosome component 4
chr15	76212012	76213230	+	76211867	76213230	A5SS	0.33	50	50	ENSMUST00000230512.2	ENSMUSG00000034259.9	Exosc4	chr15	protein_coding	exosome component 4
chr15	76215663	76216360	+	76215663;76216275	76216096;76216360	ES	0.5	50	50	ENSMUST00000023221.13	ENSMUSG00000022561.14	Gpaa1	chr15	protein_coding	GPI anchor attachment protein 1
chr15	76215663	76215844	+	76215663	76216096	A3SS	0.33	50	50	ENSMUST00000023221.13	ENSMUSG00000022561.14	Gpaa1	chr15	protein_coding	GPI anchor attachment protein 1
chr15	76216487	76216684	+	76216471	76216684	A5SS	0.5	50	50	ENSMUST00000023221.13	ENSMUSG00000022561.14	Gpaa1	chr15	protein_coding	GPI anchor attachment protein 1
chr15	76217216	76217377	+	76217299	76217377	A5SS	0.5	50	50	ENSMUST00000023221.13	ENSMUSG00000022561.14	Gpaa1	chr15	protein_coding	GPI anchor attachment protein 1
chr15	76215663	76216360	+	76215663;76216275	76215844;76216360	ES	0.5	50	50	ENSMUST00000164972.8	ENSMUSG00000022561.14	Gpaa1	chr15	protein_coding	GPI anchor attachment protein 1
chr15	76215663	76216360	+	76216275	76216360	5pMXE	0.5	50	50	ENSMUST00000169378.2	ENSMUSG00000022561.14	Gpaa1	chr15	protein_coding	GPI anchor attachment protein 1
chr15	76227892	76228457	+	76227892	76228502	A3SS	0.33	50	50	ENSMUST00000023210.8	ENSMUSG00000022551.9	Cyc1	chr15	protein_coding	cytochrome c-1
chr15	76227892	76228480	+	76227892	76228502	A3SS	0.33	50	50	ENSMUST00000023210.8	ENSMUSG00000022551.9	Cyc1	chr15	protein_coding	cytochrome c-1
chr15	76228698	76228757	+	76228698	76228782	A3SS	0.5	50	50	ENSMUST00000023210.8	ENSMUSG00000022551.9	Cyc1	chr15	protein_coding	cytochrome c-1
chr15	76227892	76228457	+	76227892	76228480	A3SS	0.33	50	50	ENSMUST00000229013.2	ENSMUSG00000022551.9	Cyc1	chr15	protein_coding	cytochrome c-1
chr15	76231408	76231459	-	76231385	76231459	A3SS	0.5	50	50	ENSMUST00000229536.2	ENSMUSG00000022552.17	Sharpin	chr15	protein_coding	SHANK-associated RH domain interacting protein
chr15	76231794	76231864	-	76231771	76231864	A3SS	0.5	50	50	ENSMUST00000229536.2	ENSMUSG00000022552.17	Sharpin	chr15	protein_coding	SHANK-associated RH domain interacting protein
chr15	76232635;76234429	76234255;76234681	-	76232635	76234681	cassetteExon	0.5	100	100	ENSMUST00000230314.2	ENSMUSG00000022552.17	Sharpin	chr15	protein_coding	SHANK-associated RH domain interacting protein
chr15	76232635;76234463	76234255;76234681	-	76232635	76234681	cassetteExon	0.5	100	100	ENSMUST00000230314.2	ENSMUSG00000022552.17	Sharpin	chr15	protein_coding	SHANK-associated RH domain interacting protein
chr15	76231989	76232096	-	76232017	76232096	A3SS	0.33	50	50	ENSMUST00000230314.2	ENSMUSG00000022552.17	Sharpin	chr15	protein_coding	SHANK-associated RH domain interacting protein
chr15	76232007	76232096	-	76232017	76232096	A3SS	0.33	50	50	ENSMUST00000230314.2	ENSMUSG00000022552.17	Sharpin	chr15	protein_coding	SHANK-associated RH domain interacting protein
chr15	76232422	76232501	-	76232427	76232501	A3SS	0.5	50	50	ENSMUST00000230314.2	ENSMUSG00000022552.17	Sharpin	chr15	protein_coding	SHANK-associated RH domain interacting protein
chr15	76234463	76234681	-	76234429	76234681	A3SS	0.33	50	50	ENSMUST00000123112.8	ENSMUSG00000022552.17	Sharpin	chr15	protein_coding	SHANK-associated RH domain interacting protein
chr15	76231989	76232096	-	76232007	76232096	A3SS	0.33	50	50	ENSMUST00000154477.8	ENSMUSG00000022552.17	Sharpin	chr15	protein_coding	SHANK-associated RH domain interacting protein
chr15	76232635	76234681	-	76232635	76234255	A5SS	0.5	50	50	ENSMUST00000154477.8	ENSMUSG00000022552.17	Sharpin	chr15	protein_coding	SHANK-associated RH domain interacting protein
chr15	76232635	76234681	-	76234463	76234681	3pMXE	0.33	50	50	ENSMUST00000133993.2	ENSMUSG00000022552.17	Sharpin	chr15	protein_coding	SHANK-associated RH domain interacting protein
chr15	76235859	76236620	+	76235859;76236241	76236196;76236620	ES	0.33	50	50	ENSMUST00000161527.8	ENSMUSG00000022553.17	Maf1	chr15	protein_coding	MAF1 homolog, negative regulator of RNA polymerase III
chr15	76237660	76238047	+	76237660;76237920	76237786;76238047	ES	0.33	50	50	ENSMUST00000161527.8	ENSMUSG00000022553.17	Maf1	chr15	protein_coding	MAF1 homolog, negative regulator of RNA polymerase III
chr15	76235859	76236624	+	76235859	76236196	A3SS&ES	0.25	50	50	ENSMUST00000161527.8	ENSMUSG00000022553.17	Maf1	chr15	protein_coding	MAF1 homolog, negative regulator of RNA polymerase III
chr15	76235859	76236667	+	76235859	76236196	A3SS&ES	0.25	50	50	ENSMUST00000161527.8	ENSMUSG00000022553.17	Maf1	chr15	protein_coding	MAF1 homolog, negative regulator of RNA polymerase III
chr15	76236483	76236620	+	76236241	76236620	A5SS	0.33	50	50	ENSMUST00000161527.8	ENSMUSG00000022553.17	Maf1	chr15	protein_coding	MAF1 homolog, negative regulator of RNA polymerase III
chr15	76237925	76238047	+	76237920	76238047	A5SS	0.33	50	50	ENSMUST00000161527.8	ENSMUSG00000022553.17	Maf1	chr15	protein_coding	MAF1 homolog, negative regulator of RNA polymerase III
chr15	76235859	76236620	+	76235859	76236667	A3SS	0.25	50	50	ENSMUST00000160853.8	ENSMUSG00000022553.17	Maf1	chr15	protein_coding	MAF1 homolog, negative regulator of RNA polymerase III
chr15	76235859	76236624	+	76235859	76236667	A3SS	0.25	50	50	ENSMUST00000160853.8	ENSMUSG00000022553.17	Maf1	chr15	protein_coding	MAF1 homolog, negative regulator of RNA polymerase III
chr15	76235859;76236483	76236196;76236620	+	76235859	76236620	cassetteExon	0.5	100	100	ENSMUST00000023212.15	ENSMUSG00000022553.17	Maf1	chr15	protein_coding	MAF1 homolog, negative regulator of RNA polymerase III
chr15	76235859	76236624	+	76235859	76236620	A3SS	0.25	50	50	ENSMUST00000023212.15	ENSMUSG00000022553.17	Maf1	chr15	protein_coding	MAF1 homolog, negative regulator of RNA polymerase III
chr15	76237660;76237925	76237786;76238047	+	76237660	76238047	cassetteExon	0.5	100	100	ENSMUST00000160172.8	ENSMUSG00000022553.17	Maf1	chr15	protein_coding	MAF1 homolog, negative regulator of RNA polymerase III
chr15	76235859	76236620	+	76235859	76236196	3pMXE	0.25	50	50	ENSMUST00000160097.2	ENSMUSG00000022553.17	Maf1	chr15	protein_coding	MAF1 homolog, negative regulator of RNA polymerase III
chr15	76235859	76236620	+	76236483	76236620	5pMXE	0.33	50	50	ENSMUST00000160914.3	ENSMUSG00000022553.17	Maf1	chr15	protein_coding	MAF1 homolog, negative regulator of RNA polymerase III
chr15	76253740	76253852	+	76253769	76253852	A5SS	0.5	50	50	ENSMUST00000023213.8	ENSMUSG00000022554.8	Hgh1	chr15	protein_coding	HGH1 homolog
chr15	76256465	76257258	-	76256465;76257176	76256555;76257258	ES	0.5	50	50	ENSMUST00000230436.2	ENSMUSG00000060794.9	Tssk5	chr15	protein_coding	testis-specific serine kinase 5
chr15	76257176	76257258	-	76256465	76257258	A3SS	0.5	50	50	ENSMUST00000227223.2	ENSMUSG00000060794.9	Tssk5	chr15	protein_coding	testis-specific serine kinase 5
chr15	76256465	76256555	-	76256465	76257258	A5SS	0.5	50	50	ENSMUST00000227223.2	ENSMUSG00000060794.9	Tssk5	chr15	protein_coding	testis-specific serine kinase 5
chr15	76316495	76317738	+	76316495;76317596	76317474;76317738	ES	0.5	50	50	ENSMUST00000161305.8	ENSMUSG00000022558.17	Mroh1	chr15	protein_coding	maestro heat-like repeat family member 1
chr15	76321590	76327450	+	76321590	76322231	3pMXE	0.33	50	50	ENSMUST00000161305.8	ENSMUSG00000022558.17	Mroh1	chr15	protein_coding	maestro heat-like repeat family member 1
chr15	76321590	76330716	+	76321590	76322231	3pMXE	0.33	50	50	ENSMUST00000161305.8	ENSMUSG00000022558.17	Mroh1	chr15	protein_coding	maestro heat-like repeat family member 1
chr15	76298532;76301618	76301496;76305340	+	76298532	76305340	cassetteExon	0.5	100	100	ENSMUST00000161305.8	ENSMUSG00000022558.17	Mroh1	chr15	protein_coding	maestro heat-like repeat family member 1
chr15	76316495;76316598	76316572;76317474	+	76316495	76317474	cassetteExon	0.5	100	100	ENSMUST00000161305.8	ENSMUSG00000022558.17	Mroh1	chr15	protein_coding	maestro heat-like repeat family member 1
chr15	76293175	76293663	+	76293175	76297102	A3SS	0.5	50	50	ENSMUST00000161305.8	ENSMUSG00000022558.17	Mroh1	chr15	protein_coding	maestro heat-like repeat family member 1
chr15	76297180	76298462	+	76297180	76298419	A3SS	0.5	50	50	ENSMUST00000161305.8	ENSMUSG00000022558.17	Mroh1	chr15	protein_coding	maestro heat-like repeat family member 1
chr15	76264776	76274231	+	76264542	76274231	A5SS	0.5	50	50	ENSMUST00000161305.8	ENSMUSG00000022558.17	Mroh1	chr15	protein_coding	maestro heat-like repeat family member 1
chr15	76274331	76276581	+	76274327	76276581	A5SS	0.5	50	50	ENSMUST00000161305.8	ENSMUSG00000022558.17	Mroh1	chr15	protein_coding	maestro heat-like repeat family member 1
chr15	76321590	76330716	+	76321590;76327604	76327450;76330716	ES	0.5	50	50	ENSMUST00000096385.11	ENSMUSG00000022558.17	Mroh1	chr15	protein_coding	maestro heat-like repeat family member 1
chr15	76331565;76333199	76332953;76334286	+	76331565	76334286	cassetteExon	0.5	100	100	ENSMUST00000096385.11	ENSMUSG00000022558.17	Mroh1	chr15	protein_coding	maestro heat-like repeat family member 1
chr15	76336378	76336481	+	76336378	76336447	A3SS	0.5	50	50	ENSMUST00000096385.11	ENSMUSG00000022558.17	Mroh1	chr15	protein_coding	maestro heat-like repeat family member 1
chr15	76316495	76317738	+	76317596	76317738	A5SS	0.5	50	50	ENSMUST00000161683.8	ENSMUSG00000022558.17	Mroh1	chr15	protein_coding	maestro heat-like repeat family member 1
chr15	76316495	76316572	+	76316495	76317738	A3SS	0.33	50	50	ENSMUST00000160631.2	ENSMUSG00000022558.17	Mroh1	chr15	protein_coding	maestro heat-like repeat family member 1
chr15	76321590	76330716	+	76327604	76330716	5pMXE	0.5	50	50	ENSMUST00000161962.2	ENSMUSG00000022558.17	Mroh1	chr15	protein_coding	maestro heat-like repeat family member 1
chr15	76380789	76381968	+	76380789;76381894	76381819;76381968	ES	0.33	50	50	ENSMUST00000228868.2	ENSMUSG00000022556.12	Hsf1	chr15	protein_coding	heat shock factor 1
chr15	76380789;76381160	76381036;76381819	+	76380789	76381819	cassetteExon	0.5	100	100	ENSMUST00000228868.2	ENSMUSG00000022556.12	Hsf1	chr15	protein_coding	heat shock factor 1
chr15	76382891;76383415	76383332;76384148	+	76382891	76384148	cassetteExon	0.5	100	100	ENSMUST00000228868.2	ENSMUSG00000022556.12	Hsf1	chr15	protein_coding	heat shock factor 1
chr15	76382490	76382637	+	76382490	76382622	A3SS	0.5	50	50	ENSMUST00000228868.2	ENSMUSG00000022556.12	Hsf1	chr15	protein_coding	heat shock factor 1
chr15	76384253	76384467	+	76384253	76384331	A3SS	0.5	50	50	ENSMUST00000228868.2	ENSMUSG00000022556.12	Hsf1	chr15	protein_coding	heat shock factor 1
chr15	76384536	76384625	+	76384536	76384617	A3SS	0.5	50	50	ENSMUST00000228868.2	ENSMUSG00000022556.12	Hsf1	chr15	protein_coding	heat shock factor 1
chr15	76382115	76382622	+	76382490	76382622	A5SS&ES	0.5	50	50	ENSMUST00000228868.2	ENSMUSG00000022556.12	Hsf1	chr15	protein_coding	heat shock factor 1
chr15	76380278	76381968	+	76380278;76380789	76380653;76381968	ES	0.33	50	50	ENSMUST00000228757.2	ENSMUSG00000022556.12	Hsf1	chr15	protein_coding	heat shock factor 1
chr15	76384253	76384467	+	76384253;76384396	76384331;76384467	ES	0.5	50	50	ENSMUST00000228757.2	ENSMUSG00000022556.12	Hsf1	chr15	protein_coding	heat shock factor 1
chr15	76380789	76381036	+	76380789	76381968	A3SS	0.33	50	50	ENSMUST00000228757.2	ENSMUSG00000022556.12	Hsf1	chr15	protein_coding	heat shock factor 1
chr15	76381894	76381968	+	76380278	76381968	A5SS	0.33	50	50	ENSMUST00000226860.2	ENSMUSG00000022556.12	Hsf1	chr15	protein_coding	heat shock factor 1
chr15	76387201	76387354	-	76387271	76387354	A3SS	0.5	50	50	ENSMUST00000023214.11	ENSMUSG00000022555.13	Dgat1	chr15	protein_coding	diacylglycerol O-acyltransferase 1
chr15	76387201	76387474	-	76387398	76387474	A3SS&ES	0.5	50	50	ENSMUST00000023214.11	ENSMUSG00000022555.13	Dgat1	chr15	protein_coding	diacylglycerol O-acyltransferase 1
chr15	76388569	76388686	-	76388601	76388686	A3SS	0.5	50	50	ENSMUST00000023214.11	ENSMUSG00000022555.13	Dgat1	chr15	protein_coding	diacylglycerol O-acyltransferase 1
chr15	76388743	76388866	-	76388771	76388866	A3SS	0.33	50	50	ENSMUST00000023214.11	ENSMUSG00000022555.13	Dgat1	chr15	protein_coding	diacylglycerol O-acyltransferase 1
chr15	76388793	76388866	-	76388771	76388866	A3SS	0.33	50	50	ENSMUST00000023214.11	ENSMUSG00000022555.13	Dgat1	chr15	protein_coding	diacylglycerol O-acyltransferase 1
chr15	76387201	76387474	-	76387201	76387354	A5SS	0.5	50	50	ENSMUST00000159908.2	ENSMUSG00000022555.13	Dgat1	chr15	protein_coding	diacylglycerol O-acyltransferase 1
chr15	76387201;76387398	76387354;76387474	-	76387201	76387474	cassetteExon	0.5	100	100	ENSMUST00000162354.8	ENSMUSG00000022555.13	Dgat1	chr15	protein_coding	diacylglycerol O-acyltransferase 1
chr15	76388420;76388906	76388549;76390766	-	76388420	76390766	cassetteExon	0.5	100	100	ENSMUST00000230722.2	ENSMUSG00000022555.13	Dgat1	chr15	protein_coding	diacylglycerol O-acyltransferase 1
chr15	76388569	76388686	-	76388569	76388744	A5SS	0.5	50	50	ENSMUST00000160293.2	ENSMUSG00000022555.13	Dgat1	chr15	protein_coding	diacylglycerol O-acyltransferase 1
chr15	76388420	76390766	-	76388420	76388549	5pMXE	0.5	50	50	ENSMUST00000159776.2	ENSMUSG00000022555.13	Dgat1	chr15	protein_coding	diacylglycerol O-acyltransferase 1
chr15	76388420	76390766	-	76388906	76390766	A3SS&ES	0.5	50	50	ENSMUST00000231035.2	ENSMUSG00000022555.13	Dgat1	chr15	protein_coding	diacylglycerol O-acyltransferase 1
chr15	76388743	76388866	-	76388793	76388866	A3SS	0.33	50	50	ENSMUST00000230894.2	ENSMUSG00000022555.13	Dgat1	chr15	protein_coding	diacylglycerol O-acyltransferase 1
chr15	76421206	76421489	-	76421206;76421397	76421290;76421489	ES	0.5	50	50	ENSMUST00000023219.9	ENSMUSG00000022559.9	Fbxl6	chr15	protein_coding	F-box and leucine-rich repeat protein 6
chr15	76421206	76421489	-	76421397	76421489	3pMXE	0.5	50	50	ENSMUST00000228994.2	ENSMUSG00000022559.9	Fbxl6	chr15	protein_coding	F-box and leucine-rich repeat protein 6
chr15	76478952	76479214	+	76478952;76479138	76479047;76479214	ES	0.5	50	50	ENSMUST00000162503.8	ENSMUSG00000022550.19	Adck5	chr15	protein_coding	aarF domain containing kinase 5
chr15	76473418	76475621	+	76473418	76477434	A3SS	0.5	50	50	ENSMUST00000162503.8	ENSMUSG00000022550.19	Adck5	chr15	protein_coding	aarF domain containing kinase 5
chr15	76477509	76477636	+	76477509	76477631	A3SS	0.5	50	50	ENSMUST00000162503.8	ENSMUSG00000022550.19	Adck5	chr15	protein_coding	aarF domain containing kinase 5
chr15	76468834	76471958	+	76460694	76471958	A5SS	0.5	50	50	ENSMUST00000162503.8	ENSMUSG00000022550.19	Adck5	chr15	protein_coding	aarF domain containing kinase 5
chr15	76479642	76479739	+	76479653	76479739	A5SS	0.5	50	50	ENSMUST00000162503.8	ENSMUSG00000022550.19	Adck5	chr15	protein_coding	aarF domain containing kinase 5
chr15	76478952	76479214	+	76478952	76479047	A3SS	0.5	50	50	ENSMUST00000162254.2	ENSMUSG00000022550.19	Adck5	chr15	protein_coding	aarF domain containing kinase 5
chr15	76478952	76479214	+	76479138	76479214	5pMXE	0.5	50	50	ENSMUST00000159049.2	ENSMUSG00000022550.19	Adck5	chr15	protein_coding	aarF domain containing kinase 5
chr15	76481541	76481846	-	76481541	76481631	5pMXE	0.5	50	50	ENSMUST00000230822.2	ENSMUSG00000034022.9	Cpsf1	chr15	protein_coding	cleavage and polyadenylation specific factor 1
chr15	76480107	76480209	-	76480132	76480209	A3SS	0.5	50	50	ENSMUST00000230822.2	ENSMUSG00000034022.9	Cpsf1	chr15	protein_coding	cleavage and polyadenylation specific factor 1
chr15	76481516	76481631	-	76481541	76481631	A3SS	0.5	50	50	ENSMUST00000230822.2	ENSMUSG00000034022.9	Cpsf1	chr15	protein_coding	cleavage and polyadenylation specific factor 1
chr15	76480549	76480851	-	76480549;76480771	76480616;76480851	ES	0.5	50	50	ENSMUST00000229269.2	ENSMUSG00000034022.9	Cpsf1	chr15	protein_coding	cleavage and polyadenylation specific factor 1
chr15	76481541;76481772	76481631;76481846	-	76481541	76481846	cassetteExon	0.5	100	100	ENSMUST00000229982.2	ENSMUSG00000034022.9	Cpsf1	chr15	protein_coding	cleavage and polyadenylation specific factor 1
chr15	76480549	76480851	-	76480771	76480851	A3SS	0.5	50	50	ENSMUST00000229982.2	ENSMUSG00000034022.9	Cpsf1	chr15	protein_coding	cleavage and polyadenylation specific factor 1
chr15	76485386	76485604	-	76485386;76485537	76485463;76485604	ES	0.5	50	50	ENSMUST00000231042.2	ENSMUSG00000034022.9	Cpsf1	chr15	protein_coding	cleavage and polyadenylation specific factor 1
chr15	76486787	76486991	-	76486848	76486991	A3SS	0.5	50	50	ENSMUST00000231042.2	ENSMUSG00000034022.9	Cpsf1	chr15	protein_coding	cleavage and polyadenylation specific factor 1
chr15	76487845	76487924	-	76487769	76487924	A3SS	0.5	50	50	ENSMUST00000231042.2	ENSMUSG00000034022.9	Cpsf1	chr15	protein_coding	cleavage and polyadenylation specific factor 1
chr15	76481541	76481846	-	76481772	76481846	A3SS&ES	0.5	50	50	ENSMUST00000229798.2	ENSMUSG00000034022.9	Cpsf1	chr15	protein_coding	cleavage and polyadenylation specific factor 1
chr15	76485386	76485604	-	76485537	76485604	3pMXE	0.5	50	50	ENSMUST00000230557.2	ENSMUSG00000034022.9	Cpsf1	chr15	protein_coding	cleavage and polyadenylation specific factor 1
chr15	76497917;76498145	76497987;76498257	-	76497917	76498257	cassetteExon	0.5	100	100	ENSMUST00000073428.7	ENSMUSG00000063354.8	Slc39a4	chr15	protein_coding	solute carrier family 39 (zinc transporter), member 4
chr15	76497917	76498257	-	76498145	76498257	3pMXE	0.5	50	50	ENSMUST00000229613.2	ENSMUSG00000063354.8	Slc39a4	chr15	protein_coding	solute carrier family 39 (zinc transporter), member 4
chr15	76508918	76509334	-	76508820	76509334	A3SS	0.5	50	50	ENSMUST00000229545.2	ENSMUSG00000115987.2	Vps28	chr15	protein_coding	vacuolar protein sorting 28
chr15	76510682	76512949	-	76510682;76512404	76512320;76512949	ES	0.5	50	50	ENSMUST00000165163.8	ENSMUSG00000059323.15	Tonsl	chr15	protein_coding	tonsoku-like, DNA repair protein
chr15	76517594	76517786	-	76517703	76517786	A3SS	0.5	50	50	ENSMUST00000168185.8	ENSMUSG00000059323.15	Tonsl	chr15	protein_coding	tonsoku-like, DNA repair protein
chr15	76521056	76521141	-	76520887	76521141	A3SS	0.5	50	50	ENSMUST00000168185.8	ENSMUSG00000059323.15	Tonsl	chr15	protein_coding	tonsoku-like, DNA repair protein
chr15	76531895	76532299	-	76530774	76532299	A3SS	0.33	50	50	ENSMUST00000081291.13	ENSMUSG00000053929.18	Cyhr1	chr15	protein_coding	cysteine and histidine rich 1
chr15	76531968	76532299	-	76530774	76532299	A3SS	0.33	50	50	ENSMUST00000081291.13	ENSMUSG00000053929.18	Cyhr1	chr15	protein_coding	cysteine and histidine rich 1
chr15	76543065	76543419	-	76533379	76543419	A3SS	0.5	50	50	ENSMUST00000081291.13	ENSMUSG00000053929.18	Cyhr1	chr15	protein_coding	cysteine and histidine rich 1
chr15	76543705	76544155	-	76543639	76544155	A3SS	0.5	50	50	ENSMUST00000081291.13	ENSMUSG00000053929.18	Cyhr1	chr15	protein_coding	cysteine and histidine rich 1
chr15	76533379	76540560	-	76533379	76543419	A5SS	0.5	50	50	ENSMUST00000081291.13	ENSMUSG00000053929.18	Cyhr1	chr15	protein_coding	cysteine and histidine rich 1
chr15	76531895	76532299	-	76531968	76532299	A3SS	0.33	50	50	ENSMUST00000176274.2	ENSMUSG00000053929.18	Cyhr1	chr15	protein_coding	cysteine and histidine rich 1
chr15	76533330	76540560	-	76533379	76540560	A3SS	0.5	50	50	ENSMUST00000176274.2	ENSMUSG00000053929.18	Cyhr1	chr15	protein_coding	cysteine and histidine rich 1
chr15	76545584	76545927	+	76545584;76545818	76545680;76545927	ES	0.5	50	50	ENSMUST00000230451.2	ENSMUSG00000004187.12	Kifc2	chr15	protein_coding	kinesin family member C2
chr15	76544643	76544908	+	76544333	76544908	A5SS	0.5	50	50	ENSMUST00000230451.2	ENSMUSG00000004187.12	Kifc2	chr15	protein_coding	kinesin family member C2
chr15	76545052	76545206	+	76544965	76545206	A5SS	0.5	50	50	ENSMUST00000230451.2	ENSMUSG00000004187.12	Kifc2	chr15	protein_coding	kinesin family member C2
chr15	76553521	76553805	-	76553533	76553805	A3SS	0.5	50	50	ENSMUST00000037824.6	ENSMUSG00000033837.6	Foxh1	chr15	protein_coding	forkhead box H1
chr15	76555962;76573694	76573528;76574372	+	76555962	76574372	cassetteExon	0.5	100	100	ENSMUST00000037551.15	ENSMUSG00000033819.17	Ppp1r16a	chr15	protein_coding	protein phosphatase 1, regulatory subunit 16A
chr15	76575712	76575897	+	76575352	76575897	A5SS	0.5	50	50	ENSMUST00000037551.15	ENSMUSG00000033819.17	Ppp1r16a	chr15	protein_coding	protein phosphatase 1, regulatory subunit 16A
chr15	76555962	76574372	+	76573694	76574372	5pMXE	0.5	50	50	ENSMUST00000138951.2	ENSMUSG00000033819.17	Ppp1r16a	chr15	protein_coding	protein phosphatase 1, regulatory subunit 16A
chr15	76577338;76577714	76577427;76577795	+	76577338	76577795	cassetteExon	0.5	100	100	ENSMUST00000150399.8	ENSMUSG00000033819.17	Ppp1r16a	chr15	protein_coding	protein phosphatase 1, regulatory subunit 16A
chr15	76577338	76577795	+	76577338	76577427	3pMXE	0.5	50	50	ENSMUST00000143274.8	ENSMUSG00000033819.17	Ppp1r16a	chr15	protein_coding	protein phosphatase 1, regulatory subunit 16A
chr15	76580040	76580998	+	76580040	76581056	A3SS	0.5	50	50	ENSMUST00000231028.2	ENSMUSG00000022546.6	Gpt	chr15	protein_coding	glutamic pyruvic transaminase, soluble
chr15	76586550	76586707	+	76586550	76586844	A3SS	0.5	50	50	ENSMUST00000019224.9	ENSMUSG00000019080.9	Mfsd3	chr15	protein_coding	major facilitator superfamily domain containing 3
chr15	76587383	76587477	+	76587383	76587463	A3SS	0.5	50	50	ENSMUST00000019224.9	ENSMUSG00000019080.9	Mfsd3	chr15	protein_coding	major facilitator superfamily domain containing 3
chr15	76592426	76592527	-	76592423	76592527	A3SS	0.5	50	50	ENSMUST00000036852.9	ENSMUSG00000033762.9	Recql4	chr15	protein_coding	RecQ protein-like 4
chr15	76595127	76597067	+	76595127;76595730	76595556;76597067	ES	0.33	50	50	ENSMUST00000136840.8	ENSMUSG00000033728.15	Lrrc14	chr15	protein_coding	leucine rich repeat containing 14
chr15	76597420	76598016	+	76597420	76597601	3pMXE	0.5	50	50	ENSMUST00000136840.8	ENSMUSG00000033728.15	Lrrc14	chr15	protein_coding	leucine rich repeat containing 14
chr15	76595127	76595622	+	76595127	76595556	A3SS	0.33	50	50	ENSMUST00000136840.8	ENSMUSG00000033728.15	Lrrc14	chr15	protein_coding	leucine rich repeat containing 14
chr15	76595036	76595556	+	76595127	76595556	A5SS	0.5	50	50	ENSMUST00000136840.8	ENSMUSG00000033728.15	Lrrc14	chr15	protein_coding	leucine rich repeat containing 14
chr15	76595036	76597067	+	76595730	76597067	A5SS&ES	0.33	50	50	ENSMUST00000136840.8	ENSMUSG00000033728.15	Lrrc14	chr15	protein_coding	leucine rich repeat containing 14
chr15	76595127;76595730	76595622;76597067	+	76595127	76597067	cassetteExon	0.5	100	100	ENSMUST00000127208.8	ENSMUSG00000033728.15	Lrrc14	chr15	protein_coding	leucine rich repeat containing 14
chr15	76595036	76597067	+	76595127	76597067	A5SS	0.33	50	50	ENSMUST00000127208.8	ENSMUSG00000033728.15	Lrrc14	chr15	protein_coding	leucine rich repeat containing 14
chr15	76595036;76595730	76595556;76597067	+	76595036	76597067	cassetteExon	0.5	100	100	ENSMUST00000036423.15	ENSMUSG00000033728.15	Lrrc14	chr15	protein_coding	leucine rich repeat containing 14
chr15	76595036	76595164	+	76595036	76597067	A3SS	0.33	50	50	ENSMUST00000036423.15	ENSMUSG00000033728.15	Lrrc14	chr15	protein_coding	leucine rich repeat containing 14
chr15	76595127	76597067	+	76595730	76597067	A5SS	0.33	50	50	ENSMUST00000137649.8	ENSMUSG00000033728.15	Lrrc14	chr15	protein_coding	leucine rich repeat containing 14
chr15	76595036	76595164	+	76595036	76595556	A3SS	0.33	50	50	ENSMUST00000155225.2	ENSMUSG00000033728.15	Lrrc14	chr15	protein_coding	leucine rich repeat containing 14
chr15	76595283	76595622	+	76595127	76595622	A5SS	0.5	50	50	ENSMUST00000154531.8	ENSMUSG00000033728.15	Lrrc14	chr15	protein_coding	leucine rich repeat containing 14
chr15	76607419	76607577	-	76607419	76607855	A5SS	0.33	50	50	ENSMUST00000036247.10	ENSMUSG00000116138.2	C030006K11Rik	chr15	protein_coding	RIKEN cDNA C030006K11 gene
chr15	76607419	76607793	-	76607419	76607855	A5SS	0.33	50	50	ENSMUST00000036247.10	ENSMUSG00000116138.2	C030006K11Rik	chr15	protein_coding	RIKEN cDNA C030006K11 gene
chr15	76607419	76607577	-	76607419	76607793	A5SS	0.33	50	50	ENSMUST00000231059.2	ENSMUSG00000116138.2	C030006K11Rik	chr15	protein_coding	RIKEN cDNA C030006K11 gene
chr15	76611676	76619077	-	76611676;76614656	76614564;76619077	ES	0.5	50	50	ENSMUST00000036176.16	ENSMUSG00000033697.17	Arhgap39	chr15	protein_coding	Rho GTPase activating protein 39
chr15	76649851;76650312	76650140;76702192	-	76649851	76702192	cassetteExon	0.5	100	100	ENSMUST00000036176.16	ENSMUSG00000033697.17	Arhgap39	chr15	protein_coding	Rho GTPase activating protein 39
chr15	76649851;76650312	76650219;76702192	-	76649851	76702192	cassetteExon	0.5	100	100	ENSMUST00000036176.16	ENSMUSG00000033697.17	Arhgap39	chr15	protein_coding	Rho GTPase activating protein 39
chr15	76642443	76649685	-	76636147	76649685	A3SS	0.33	50	50	ENSMUST00000036176.16	ENSMUSG00000033697.17	Arhgap39	chr15	protein_coding	Rho GTPase activating protein 39
chr15	76642500	76649685	-	76636147	76649685	A3SS	0.33	50	50	ENSMUST00000036176.16	ENSMUSG00000033697.17	Arhgap39	chr15	protein_coding	Rho GTPase activating protein 39
chr15	76649851	76678795	-	76649851	76702192	A5SS	0.25	50	50	ENSMUST00000036176.16	ENSMUSG00000033697.17	Arhgap39	chr15	protein_coding	Rho GTPase activating protein 39
chr15	76649851	76650140	-	76649851	76678795	A5SS	0.25	50	50	ENSMUST00000176855.9	ENSMUSG00000033697.17	Arhgap39	chr15	protein_coding	Rho GTPase activating protein 39
chr15	76649851	76650219	-	76649851	76678795	A5SS	0.25	50	50	ENSMUST00000176855.9	ENSMUSG00000033697.17	Arhgap39	chr15	protein_coding	Rho GTPase activating protein 39
chr15	76642443	76649685	-	76642500	76649685	A3SS	0.33	50	50	ENSMUST00000176219.9	ENSMUSG00000033697.17	Arhgap39	chr15	protein_coding	Rho GTPase activating protein 39
chr15	76650312	76702192	-	76650312	76701999	5pMXE	0.5	50	50	ENSMUST00000175843.3	ENSMUSG00000033697.17	Arhgap39	chr15	protein_coding	Rho GTPase activating protein 39
chr15	76649851	76650219	-	76649851	76650140	A5SS	0.33	50	50	ENSMUST00000175843.3	ENSMUSG00000033697.17	Arhgap39	chr15	protein_coding	Rho GTPase activating protein 39
chr15	76754120	76754853	-	76754120;76754614	76754482;76754853	ES	0.5	50	50	ENSMUST00000080406.7	ENSMUSG00000022526.9	Zfp251	chr15	protein_coding	zinc finger protein 251
chr15	76754120	76754853	-	76754120	76754482	A5SS	0.5	50	50	ENSMUST00000229494.2	ENSMUSG00000022526.9	Zfp251	chr15	protein_coding	zinc finger protein 251
chr15	76754120	76754853	-	76754614	76754853	3pMXE	0.5	50	50	ENSMUST00000230524.2	ENSMUSG00000022526.9	Zfp251	chr15	protein_coding	zinc finger protein 251
chr15	76765438	76774207	+	76765438;76772547	76772431;76774207	ES	0.33	50	50	ENSMUST00000023179.7	ENSMUSG00000033669.9	Zfp7	chr15	protein_coding	zinc finger protein 7
chr15	76772547	76784552	+	76772547	76774207	3pMXE	0.25	50	50	ENSMUST00000023179.7	ENSMUSG00000033669.9	Zfp7	chr15	protein_coding	zinc finger protein 7
chr15	76772547;76773686	76773409;76774207	+	76772547	76774207	cassetteExon	0.5	100	100	ENSMUST00000023179.7	ENSMUSG00000033669.9	Zfp7	chr15	protein_coding	zinc finger protein 7
chr15	76772547;76773686	76773536;76774207	+	76772547	76774207	cassetteExon	0.5	100	100	ENSMUST00000023179.7	ENSMUSG00000033669.9	Zfp7	chr15	protein_coding	zinc finger protein 7
chr15	76764982	76765315	+	76764982	76765312	A3SS	0.5	50	50	ENSMUST00000023179.7	ENSMUSG00000033669.9	Zfp7	chr15	protein_coding	zinc finger protein 7
chr15	76763797	76764939	+	76763553	76764939	A5SS	0.5	50	50	ENSMUST00000023179.7	ENSMUSG00000033669.9	Zfp7	chr15	protein_coding	zinc finger protein 7
chr15	76773686	76774207	+	76765438	76774207	A5SS	0.33	50	50	ENSMUST00000229831.2	ENSMUSG00000033669.9	Zfp7	chr15	protein_coding	zinc finger protein 7
chr15	76765438	76774207	+	76765438	76772431	3pMXE	0.5	50	50	ENSMUST00000229729.2	ENSMUSG00000033669.9	Zfp7	chr15	protein_coding	zinc finger protein 7
chr15	76772547	76774207	+	76772547	76773409	3pMXE	0.25	50	50	ENSMUST00000229990.2	ENSMUSG00000033669.9	Zfp7	chr15	protein_coding	zinc finger protein 7
chr15	76772547	76784552	+	76772547	76773409	3pMXE	0.25	50	50	ENSMUST00000229990.2	ENSMUSG00000033669.9	Zfp7	chr15	protein_coding	zinc finger protein 7
chr15	76772547	76773536	+	76772547	76773409	A3SS	0.25	50	50	ENSMUST00000229990.2	ENSMUSG00000033669.9	Zfp7	chr15	protein_coding	zinc finger protein 7
chr15	76772547	76773536	+	76772547	76784552	A3SS	0.25	50	50	ENSMUST00000230214.2	ENSMUSG00000116024.2	Gm49527	chr15	protein_coding	predicted gene, 49527
chr15	76784192	76784552	+	76772547	76784552	A5SS	0.33	50	50	ENSMUST00000230214.2	ENSMUSG00000116024.2	Gm49527	chr15	protein_coding	predicted gene, 49527
chr15	76784215	76784552	+	76772547	76784552	A5SS	0.33	50	50	ENSMUST00000230214.2	ENSMUSG00000116024.2	Gm49527	chr15	protein_coding	predicted gene, 49527
chr15	76784215	76784552	+	76784192	76784552	A5SS	0.33	50	50	ENSMUST00000068407.6	ENSMUSG00000055041.9	Commd5	chr15	protein_coding	COMM domain containing 5
chr15	76802261;76805400	76805049;76809576	-	76802261	76809576	cassetteExon	0.5	100	100	ENSMUST00000229055.2	ENSMUSG00000054967.8	Zfp647	chr15	protein_coding	zinc finger protein 647
chr15	76802261;76805400	76805316;76809576	-	76802261	76809576	cassetteExon	0.5	100	100	ENSMUST00000229055.2	ENSMUSG00000054967.8	Zfp647	chr15	protein_coding	zinc finger protein 647
chr15	76802261;76805594	76805316;76809576	-	76802261	76809576	cassetteExon	0.5	100	100	ENSMUST00000229055.2	ENSMUSG00000054967.8	Zfp647	chr15	protein_coding	zinc finger protein 647
chr15	76802261;76805226	76805049;76805316	-	76802261	76805316	cassetteExon	0.5	100	100	ENSMUST00000229865.2	ENSMUSG00000054967.8	Zfp647	chr15	protein_coding	zinc finger protein 647
chr15	76805594	76809576	-	76805400	76809576	A3SS	0.33	50	50	ENSMUST00000229865.2	ENSMUSG00000054967.8	Zfp647	chr15	protein_coding	zinc finger protein 647
chr15	76833352	76833747	+	76833352	76833744	A3SS	0.5	50	50	ENSMUST00000071792.7	ENSMUSG00000063236.7	1110038F14Rik	chr15	protein_coding	RIKEN cDNA 1110038F14 gene
chr15	76873611	76880730	+	76873611	76880478	A3SS	0.5	50	50	ENSMUST00000231197.2	ENSMUSG00000116339.2	Gm35933	chr15	lncRNA	predicted gene, 35933
chr15	76872426	76873515	+	76872548	76873515	A5SS	0.5	50	50	ENSMUST00000231197.2	ENSMUSG00000116339.2	Gm35933	chr15	lncRNA	predicted gene, 35933
chr15	76906791;76924056	76923970;76934725	-	76906791	76934725	cassetteExon	0.5	100	100	ENSMUST00000166179.9	ENSMUSG00000018893.16	Mb	chr15	protein_coding	myoglobin
chr15	76901998	76906087	-	76901998	76906689	A5SS	0.5	50	50	ENSMUST00000166179.9	ENSMUSG00000018893.16	Mb	chr15	protein_coding	myoglobin
chr15	76906791	76906872	-	76906791	76934725	A5SS	0.25	50	50	ENSMUST00000166179.9	ENSMUSG00000018893.16	Mb	chr15	protein_coding	myoglobin
chr15	76906791	76910252	-	76906791	76934725	A5SS	0.25	50	50	ENSMUST00000166179.9	ENSMUSG00000018893.16	Mb	chr15	protein_coding	myoglobin
chr15	76906791	76906872	-	76906791	76923970	A5SS	0.25	50	50	ENSMUST00000229423.2	ENSMUSG00000018893.16	Mb	chr15	protein_coding	myoglobin
chr15	76906791	76910252	-	76906791	76923970	A5SS	0.25	50	50	ENSMUST00000229423.2	ENSMUSG00000018893.16	Mb	chr15	protein_coding	myoglobin
chr15	76906791	76910252	-	76906791	76906872	5pMXE	0.25	50	50	ENSMUST00000019037.10	ENSMUSG00000018893.16	Mb	chr15	protein_coding	myoglobin
chr15	76929958	76930314	+	76929958	76931231	A3SS	0.33	50	50	ENSMUST00000142405.8	ENSMUSG00000033576.13	Apol6	chr15	protein_coding	apolipoprotein L 6
chr15	76929958	76931208	+	76929958	76931231	A3SS	0.33	50	50	ENSMUST00000142405.8	ENSMUSG00000033576.13	Apol6	chr15	protein_coding	apolipoprotein L 6
chr15	76931331	76934807	+	76931331	76934862	A3SS	0.5	50	50	ENSMUST00000142405.8	ENSMUSG00000033576.13	Apol6	chr15	protein_coding	apolipoprotein L 6
chr15	76929515	76929865	+	76929371	76929865	A5SS	0.33	50	50	ENSMUST00000142405.8	ENSMUSG00000033576.13	Apol6	chr15	protein_coding	apolipoprotein L 6
chr15	76929540	76929865	+	76929371	76929865	A5SS	0.33	50	50	ENSMUST00000142405.8	ENSMUSG00000033576.13	Apol6	chr15	protein_coding	apolipoprotein L 6
chr15	76937352	76940052	+	76935605	76940052	A5SS	0.5	50	50	ENSMUST00000142405.8	ENSMUSG00000033576.13	Apol6	chr15	protein_coding	apolipoprotein L 6
chr15	76929540	76929865	+	76929515	76929865	A5SS	0.33	50	50	ENSMUST00000129468.8	ENSMUSG00000033576.13	Apol6	chr15	protein_coding	apolipoprotein L 6
chr15	76929958	76930314	+	76929958	76931208	A3SS	0.33	50	50	ENSMUST00000152949.2	ENSMUSG00000033576.13	Apol6	chr15	protein_coding	apolipoprotein L 6
chr15	76968406	76970267	-	76968406;76969850	76969778;76970267	ES	0.5	50	50	ENSMUST00000171751.10	ENSMUSG00000033565.19	Rbfox2	chr15	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 2
chr15	76970355	76982140	-	76970355;76978690	76978651;76982140	ES	0.33	50	50	ENSMUST00000171751.10	ENSMUSG00000033565.19	Rbfox2	chr15	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 2
chr15	76987139	76997805	-	76987139;76989869	76989777;76997805	ES	0.5	50	50	ENSMUST00000171751.10	ENSMUSG00000033565.19	Rbfox2	chr15	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 2
chr15	77017141	77190564	-	77017141;77115637	77115587;77190564	ES	0.5	50	50	ENSMUST00000171751.10	ENSMUSG00000033565.19	Rbfox2	chr15	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 2
chr15	76970355;76976054	76976012;76982140	-	76970355;76978690	76978651;76982140	MXE	0.5	100	100	ENSMUST00000171751.10	ENSMUSG00000033565.19	Rbfox2	chr15	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 2
chr15	76966471	76969778	-	76968406	76969778	A3SS	0.5	50	50	ENSMUST00000171751.10	ENSMUSG00000033565.19	Rbfox2	chr15	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 2
chr15	76982272	76983440	-	76982284	76983440	A3SS	0.5	50	50	ENSMUST00000171751.10	ENSMUSG00000033565.19	Rbfox2	chr15	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 2
chr15	77001264	77016917	-	77001267	77016917	A3SS	0.33	50	50	ENSMUST00000171751.10	ENSMUSG00000033565.19	Rbfox2	chr15	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 2
chr15	76970355	76973793	-	76970355	76978651	A5SS	0.25	50	50	ENSMUST00000171751.10	ENSMUSG00000033565.19	Rbfox2	chr15	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 2
chr15	77017141	77037730	-	77017141	77115587	A5SS	0.25	50	50	ENSMUST00000171751.10	ENSMUSG00000033565.19	Rbfox2	chr15	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 2
chr15	77017141	77087562	-	77017141	77115587	A5SS	0.25	50	50	ENSMUST00000171751.10	ENSMUSG00000033565.19	Rbfox2	chr15	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 2
chr15	77115637	77129690	-	77115637	77190564	A5SS	0.5	50	50	ENSMUST00000171751.10	ENSMUSG00000033565.19	Rbfox2	chr15	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 2
chr15	77017141	77087562	-	77017141	77037730	5pMXE	0.25	50	50	ENSMUST00000166610.8	ENSMUSG00000033565.19	Rbfox2	chr15	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 2
chr15	77017141	77190564	-	77017141	77037730	5pMXE	0.25	50	50	ENSMUST00000166610.8	ENSMUSG00000033565.19	Rbfox2	chr15	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 2
chr15	76970355;76976054	76976012;76982140	-	76970355	76982140	cassetteExon	0.5	100	100	ENSMUST00000111581.4	ENSMUSG00000033565.19	Rbfox2	chr15	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 2
chr15	76968406	76970267	-	76969850	76970267	A3SS&ES	0.5	50	50	ENSMUST00000111581.4	ENSMUSG00000033565.19	Rbfox2	chr15	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 2
chr15	76970355	76973793	-	76970355	76982140	A5SS	0.25	50	50	ENSMUST00000111581.4	ENSMUSG00000033565.19	Rbfox2	chr15	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 2
chr15	76970355	76973793	-	76970355	76976012	A5SS	0.25	50	50	ENSMUST00000227314.2	ENSMUSG00000033565.19	Rbfox2	chr15	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 2
chr15	77001264	77016917	-	76987139	77016917	A3SS	0.33	50	50	ENSMUST00000227930.2	ENSMUSG00000033565.19	Rbfox2	chr15	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 2
chr15	77001267	77016917	-	76987139	77016917	A3SS	0.33	50	50	ENSMUST00000227930.2	ENSMUSG00000033565.19	Rbfox2	chr15	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 2
chr15	76987139	76989777	-	76987139	77016917	A5SS	0.33	50	50	ENSMUST00000227930.2	ENSMUSG00000033565.19	Rbfox2	chr15	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 2
chr15	76987139	76997805	-	76987139	77016917	A5SS	0.33	50	50	ENSMUST00000227930.2	ENSMUSG00000033565.19	Rbfox2	chr15	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 2
chr15	77017141	77087562	-	77017141	77190564	A5SS	0.25	50	50	ENSMUST00000228582.2	ENSMUSG00000033565.19	Rbfox2	chr15	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 2
chr15	77280517	77283138	-	77280517;77280706	77280607;77283138	ES	0.5	50	50	ENSMUST00000176074.9	ENSMUSG00000010601.15	Apol7a	chr15	protein_coding	apolipoprotein L 7a
chr15	77280517	77282515	-	77280517	77280607	A5SS&ES	0.33	50	50	ENSMUST00000176074.9	ENSMUSG00000010601.15	Apol7a	chr15	protein_coding	apolipoprotein L 7a
chr15	77280517	77282515	-	77280517	77283138	A5SS	0.33	50	50	ENSMUST00000175919.8	ENSMUSG00000010601.15	Apol7a	chr15	protein_coding	apolipoprotein L 7a
chr15	77280517	77283138	-	77280517	77280607	5pMXE	0.33	50	50	ENSMUST00000010745.13	ENSMUSG00000010601.15	Apol7a	chr15	protein_coding	apolipoprotein L 7a
chr15	77289906	77290587	-	77289906	77295128	A5SS	0.33	50	50	ENSMUST00000089452.6	ENSMUSG00000057346.13	Apol9a	chr15	protein_coding	apolipoprotein L 9a
chr15	77289906	77295226	-	77289906	77295128	A5SS	0.33	50	50	ENSMUST00000089452.6	ENSMUSG00000057346.13	Apol9a	chr15	protein_coding	apolipoprotein L 9a
chr15	77289906	77290587	-	77289906	77295226	A5SS	0.33	50	50	ENSMUST00000081776.11	ENSMUSG00000057346.13	Apol9a	chr15	protein_coding	apolipoprotein L 9a
chr15	77312009	77330377	-	77312009	77331580	A5SS	0.5	50	50	ENSMUST00000089469.7	ENSMUSG00000068252.7	Apol7b	chr15	protein_coding	apolipoprotein L 7b
chr15	77313706;77325616	77325515;77345910	+	77313706	77345910	cassetteExon	0.5	100	100	ENSMUST00000142914.2	ENSMUSG00000086467.3	4930571N24Rik	chr15	lncRNA	RIKEN cDNA 4930571N24 gene
chr15	77414693	77417440	-	77414712	77417440	A3SS	0.5	50	50	ENSMUST00000062562.7	ENSMUSG00000044309.9	Apol7c	chr15	protein_coding	apolipoprotein L 7c
chr15	77519917	77524747	-	77519917;77522258	77522135;77524747	ES	0.5	50	50	ENSMUST00000166623.10	ENSMUSG00000091694.10	Apol11b	chr15	protein_coding	apolipoprotein L 11b
chr15	77524827;77527090	77526851;77527402	-	77524827	77527402	cassetteExon	0.5	100	100	ENSMUST00000166623.10	ENSMUSG00000091694.10	Apol11b	chr15	protein_coding	apolipoprotein L 11b
chr15	77524827	77526329	-	77524827	77527402	A5SS	0.33	50	50	ENSMUST00000166623.10	ENSMUSG00000091694.10	Apol11b	chr15	protein_coding	apolipoprotein L 11b
chr15	77524827;77526489	77526329;77526851	-	77524827	77526851	cassetteExon	0.5	100	100	ENSMUST00000180949.8	ENSMUSG00000091694.10	Apol11b	chr15	protein_coding	apolipoprotein L 11b
chr15	77613446	77618665	+	77613348	77618665	A5SS	0.33	50	50	ENSMUST00000230979.2	ENSMUSG00000068246.7	Apol9b	chr15	protein_coding	apolipoprotein L 9b
chr15	77617996	77618665	+	77613348	77618665	A5SS	0.33	50	50	ENSMUST00000230979.2	ENSMUSG00000068246.7	Apol9b	chr15	protein_coding	apolipoprotein L 9b
chr15	77613446;77617996	77617826;77618665	+	77613446	77618665	cassetteExon	0.5	100	100	ENSMUST00000109775.4	ENSMUSG00000068246.7	Apol9b	chr15	protein_coding	apolipoprotein L 9b
chr15	77613446	77618665	+	77617996	77618665	5pMXE	0.33	50	50	ENSMUST00000230377.2	ENSMUSG00000068246.7	Apol9b	chr15	protein_coding	apolipoprotein L 9b
chr15	77637508	77641013	-	77637508	77639388	5pMXE	0.33	50	50	ENSMUST00000089450.5	ENSMUSG00000056656.7	Apol8	chr15	protein_coding	apolipoprotein L 8
chr15	77637508;77639175	77639145;77639388	-	77637508	77639388	cassetteExon	0.5	100	100	ENSMUST00000089450.5	ENSMUSG00000056656.7	Apol8	chr15	protein_coding	apolipoprotein L 8
chr15	77637508;77639175	77639145;77641013	-	77637508	77641013	cassetteExon	0.5	100	100	ENSMUST00000070911.4	ENSMUSG00000056656.7	Apol8	chr15	protein_coding	apolipoprotein L 8
chr15	77639175	77641013	-	77639175	77639388	5pMXE	0.5	50	50	ENSMUST00000229445.2	ENSMUSG00000056656.7	Apol8	chr15	protein_coding	apolipoprotein L 8
chr15	77637508	77641013	-	77639175	77641013	A3SS&ES	0.5	50	50	ENSMUST00000229332.2	ENSMUSG00000056656.7	Apol8	chr15	protein_coding	apolipoprotein L 8
chr15	77692224;77692658	77692553;77697080	-	77692224	77697080	cassetteExon	0.5	100	100	ENSMUST00000016771.13	ENSMUSG00000022443.18	Myh9	chr15	protein_coding	myosin, heavy polypeptide 9, non-muscle
chr15	77678940	77680161	-	77676546	77680161	A3SS	0.5	50	50	ENSMUST00000016771.13	ENSMUSG00000022443.18	Myh9	chr15	protein_coding	myosin, heavy polypeptide 9, non-muscle
chr15	77664259	77665311	-	77661199	77665311	A3SS	0.5	50	50	ENSMUST00000231192.2	ENSMUSG00000022443.18	Myh9	chr15	protein_coding	myosin, heavy polypeptide 9, non-muscle
chr15	77661199	77661968	-	77661199	77665311	A5SS	0.5	50	50	ENSMUST00000231192.2	ENSMUSG00000022443.18	Myh9	chr15	protein_coding	myosin, heavy polypeptide 9, non-muscle
chr15	77799436	77799905	-	77799436	77799825	5pMXE	0.5	50	50	ENSMUST00000173561.8	ENSMUSG00000005354.17	Txn2	chr15	protein_coding	thioredoxin 2
chr15	77804046	77808743	-	77800057	77808743	A3SS	0.5	50	50	ENSMUST00000173631.8	ENSMUSG00000005354.17	Txn2	chr15	protein_coding	thioredoxin 2
chr15	77810919	77811892	-	77808866	77811892	A3SS	0.5	50	50	ENSMUST00000173631.8	ENSMUSG00000005354.17	Txn2	chr15	protein_coding	thioredoxin 2
chr15	77840289	77840669	-	77840289	77840767	A5SS	0.5	50	50	ENSMUST00000016696.13	ENSMUSG00000016552.14	Foxred2	chr15	protein_coding	FAD-dependent oxidoreductase domain containing 2
chr15	77852421	77852518	-	77852421	77852657	A5SS	0.5	50	50	ENSMUST00000100484.6	ENSMUSG00000016554.10	Eif3d	chr15	protein_coding	eukaryotic translation initiation factor 3, subunit D
chr15	77852789	77854659	-	77852789	77854883	A5SS	0.5	50	50	ENSMUST00000100484.6	ENSMUSG00000016554.10	Eif3d	chr15	protein_coding	eukaryotic translation initiation factor 3, subunit D
chr15	78052192	78057969	-	78052192	78057588	5pMXE	0.25	50	50	ENSMUST00000230844.2	ENSMUSG00000016637.8	Ift27	chr15	protein_coding	intraflagellar transport 27
chr15	78051651	78052113	-	78051329	78052113	A3SS	0.5	50	50	ENSMUST00000230844.2	ENSMUSG00000016637.8	Ift27	chr15	protein_coding	intraflagellar transport 27
chr15	78052192	78052272	-	78052192	78057588	A5SS	0.25	50	50	ENSMUST00000230844.2	ENSMUSG00000016637.8	Ift27	chr15	protein_coding	intraflagellar transport 27
chr15	78052192	78056588	-	78052192	78057588	A5SS	0.25	50	50	ENSMUST00000230844.2	ENSMUSG00000016637.8	Ift27	chr15	protein_coding	intraflagellar transport 27
chr15	78052192	78052272	-	78052192	78057969	A5SS	0.25	50	50	ENSMUST00000016781.8	ENSMUSG00000016637.8	Ift27	chr15	protein_coding	intraflagellar transport 27
chr15	78052192	78056588	-	78052192	78057969	A5SS	0.25	50	50	ENSMUST00000016781.8	ENSMUSG00000016637.8	Ift27	chr15	protein_coding	intraflagellar transport 27
chr15	78052192	78052272	-	78052192	78056588	A5SS	0.25	50	50	ENSMUST00000229476.2	ENSMUSG00000016637.8	Ift27	chr15	protein_coding	intraflagellar transport 27
chr15	78139114	78140131	+	78139114;78139709	78139652;78140131	ES	0.5	50	50	ENSMUST00000096357.12	ENSMUSG00000071715.13	Ncf4	chr15	protein_coding	neutrophil cytosolic factor 4
chr15	78140229;78144291	78144143;78144824	+	78140229	78144824	cassetteExon	0.5	100	100	ENSMUST00000096357.12	ENSMUSG00000071715.13	Ncf4	chr15	protein_coding	neutrophil cytosolic factor 4
chr15	78139114	78140131	+	78139709	78140131	5pMXE	0.5	50	50	ENSMUST00000146147.2	ENSMUSG00000071715.13	Ncf4	chr15	protein_coding	neutrophil cytosolic factor 4
chr15	78177065	78181176	-	78177065;78178729	78178542;78181176	ES	0.5	50	50	ENSMUST00000096356.5	ENSMUSG00000071714.8	Csf2rb2	chr15	protein_coding	colony stimulating factor 2 receptor, beta 2, low-affinity (granulocyte-macrophage)
chr15	78176171;78177065	78176661;78178542	-	78176171	78178542	cassetteExon	0.5	100	100	ENSMUST00000230115.3	ENSMUSG00000071714.8	Csf2rb2	chr15	protein_coding	colony stimulating factor 2 receptor, beta 2, low-affinity (granulocyte-macrophage)
chr15	78176171;78177065	78176661;78181176	-	78176171;78178729	78178542;78181176	MXE	0.5	100	100	ENSMUST00000230115.3	ENSMUSG00000071714.8	Csf2rb2	chr15	protein_coding	colony stimulating factor 2 receptor, beta 2, low-affinity (granulocyte-macrophage)
chr15	78170283;78171263	78170912;78172088	-	78170283	78172088	cassetteExon	0.5	100	100	ENSMUST00000230753.2	ENSMUSG00000071714.8	Csf2rb2	chr15	protein_coding	colony stimulating factor 2 receptor, beta 2, low-affinity (granulocyte-macrophage)
chr15	78210298	78220548	+	78210298;78219494	78219258;78220548	ES	0.5	50	50	ENSMUST00000230264.3	ENSMUSG00000071713.7	Csf2rb	chr15	protein_coding	colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)
chr15	78231677	78237743	+	78231677	78232272	3pMXE	0.5	50	50	ENSMUST00000230264.3	ENSMUSG00000071713.7	Csf2rb	chr15	protein_coding	colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)
chr15	78219494	78219906	+	78219494	78220548	A3SS	0.5	50	50	ENSMUST00000230264.3	ENSMUSG00000071713.7	Csf2rb	chr15	protein_coding	colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)
chr15	78210298	78220548	+	78210298	78219258	3pMXE	0.5	50	50	ENSMUST00000231769.2	ENSMUSG00000071713.7	Csf2rb	chr15	protein_coding	colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)
chr15	78270744	78274343	-	78270744	78272876	5pMXE	0.5	50	50	ENSMUST00000169575.2	ENSMUSG00000062154.15	Tex33	chr15	protein_coding	testis expressed 33
chr15	78291063	78294243	+	78290944	78294243	A5SS	0.33	50	50	ENSMUST00000229791.2	ENSMUSG00000071711.13	Mpst	chr15	protein_coding	mercaptopyruvate sulfurtransferase
chr15	78291470	78294243	+	78290944	78294243	A5SS	0.33	50	50	ENSMUST00000229791.2	ENSMUSG00000071711.13	Mpst	chr15	protein_coding	mercaptopyruvate sulfurtransferase
chr15	78291063	78294243	+	78291470	78294243	A5SS	0.33	50	50	ENSMUST00000043865.8	ENSMUSG00000071711.13	Mpst	chr15	protein_coding	mercaptopyruvate sulfurtransferase
chr15	78319910	78321784	+	78319910;78321432	78321358;78321784	ES	0.25	50	50	ENSMUST00000162517.8	ENSMUSG00000033287.17	Kctd17	chr15	protein_coding	potassium channel tetramerisation domain containing 17
chr15	78319910;78321163	78321101;78321784	+	78319910;78321432	78321358;78321784	MXE	0.5	100	100	ENSMUST00000162517.8	ENSMUSG00000033287.17	Kctd17	chr15	protein_coding	potassium channel tetramerisation domain containing 17
chr15	78319910;78321194	78321101;78321358	+	78319910	78321358	cassetteExon	0.5	100	100	ENSMUST00000162517.8	ENSMUSG00000033287.17	Kctd17	chr15	protein_coding	potassium channel tetramerisation domain containing 17
chr15	78319910;78321194	78321101;78321784	+	78319910;78321432	78321358;78321784	MXE	0.5	100	100	ENSMUST00000162517.8	ENSMUSG00000033287.17	Kctd17	chr15	protein_coding	potassium channel tetramerisation domain containing 17
chr15	78319910;78321194	78321101;78322687	+	78319910;78321871	78321358;78322687	MXE	0.5	100	100	ENSMUST00000162517.8	ENSMUSG00000033287.17	Kctd17	chr15	protein_coding	potassium channel tetramerisation domain containing 17
chr15	78319910;78321299	78321101;78322687	+	78319910;78321871	78321358;78322687	MXE	0.5	100	100	ENSMUST00000162517.8	ENSMUSG00000033287.17	Kctd17	chr15	protein_coding	potassium channel tetramerisation domain containing 17
chr15	78313902	78314242	+	78313067	78314242	A5SS	0.5	50	50	ENSMUST00000162517.8	ENSMUSG00000033287.17	Kctd17	chr15	protein_coding	potassium channel tetramerisation domain containing 17
chr15	78319910	78322687	+	78319910;78321871	78321784;78322687	ES	0.25	50	50	ENSMUST00000166142.10	ENSMUSG00000033287.17	Kctd17	chr15	protein_coding	potassium channel tetramerisation domain containing 17
chr15	78319910;78321163	78321101;78321784	+	78319910	78321784	cassetteExon	0.5	100	100	ENSMUST00000166142.10	ENSMUSG00000033287.17	Kctd17	chr15	protein_coding	potassium channel tetramerisation domain containing 17
chr15	78319910;78321194	78321101;78321784	+	78319910	78321784	cassetteExon	0.5	100	100	ENSMUST00000166142.10	ENSMUSG00000033287.17	Kctd17	chr15	protein_coding	potassium channel tetramerisation domain containing 17
chr15	78319910;78321194	78321101;78322687	+	78319910;78321871	78321784;78322687	MXE	0.5	100	100	ENSMUST00000166142.10	ENSMUSG00000033287.17	Kctd17	chr15	protein_coding	potassium channel tetramerisation domain containing 17
chr15	78319910;78321299	78321101;78322687	+	78319910;78321871	78321784;78322687	MXE	0.5	100	100	ENSMUST00000166142.10	ENSMUSG00000033287.17	Kctd17	chr15	protein_coding	potassium channel tetramerisation domain containing 17
chr15	78319910;78321432	78321101;78321784	+	78319910	78321784	cassetteExon	0.5	100	100	ENSMUST00000166142.10	ENSMUSG00000033287.17	Kctd17	chr15	protein_coding	potassium channel tetramerisation domain containing 17
chr15	78319910	78322687	+	78319910;78321194	78321101;78322687	ES	0.25	50	50	ENSMUST00000089414.11	ENSMUSG00000033287.17	Kctd17	chr15	protein_coding	potassium channel tetramerisation domain containing 17
chr15	78321194;78321871	78321784;78322687	+	78321194	78322687	cassetteExon	0.5	100	100	ENSMUST00000089414.11	ENSMUSG00000033287.17	Kctd17	chr15	protein_coding	potassium channel tetramerisation domain containing 17
chr15	78319910	78321358	+	78319910	78321101	A3SS&ES	0.25	50	50	ENSMUST00000089414.11	ENSMUSG00000033287.17	Kctd17	chr15	protein_coding	potassium channel tetramerisation domain containing 17
chr15	78321194	78321358	+	78321194	78322687	A3SS	0.33	50	50	ENSMUST00000089414.11	ENSMUSG00000033287.17	Kctd17	chr15	protein_coding	potassium channel tetramerisation domain containing 17
chr15	78321299	78322687	+	78321194	78322687	A5SS	0.25	50	50	ENSMUST00000089414.11	ENSMUSG00000033287.17	Kctd17	chr15	protein_coding	potassium channel tetramerisation domain containing 17
chr15	78319910;78321299	78321101;78322687	+	78319910	78322687	cassetteExon	0.5	100	100	ENSMUST00000159771.8	ENSMUSG00000033287.17	Kctd17	chr15	protein_coding	potassium channel tetramerisation domain containing 17
chr15	78319910	78321358	+	78319910	78322687	A3SS	0.25	50	50	ENSMUST00000159771.8	ENSMUSG00000033287.17	Kctd17	chr15	protein_coding	potassium channel tetramerisation domain containing 17
chr15	78321194	78321784	+	78321163	78321784	A5SS	0.25	50	50	ENSMUST00000229622.2	ENSMUSG00000033287.17	Kctd17	chr15	protein_coding	potassium channel tetramerisation domain containing 17
chr15	78321194	78322687	+	78321871	78322687	A5SS&ES	0.25	50	50	ENSMUST00000229622.2	ENSMUSG00000033287.17	Kctd17	chr15	protein_coding	potassium channel tetramerisation domain containing 17
chr15	78321299	78322687	+	78321871	78322687	A5SS&ES	0.25	50	50	ENSMUST00000229622.2	ENSMUSG00000033287.17	Kctd17	chr15	protein_coding	potassium channel tetramerisation domain containing 17
chr15	78321194;78321432	78321358;78321784	+	78321194	78321784	cassetteExon	0.5	100	100	ENSMUST00000162808.2	ENSMUSG00000033287.17	Kctd17	chr15	protein_coding	potassium channel tetramerisation domain containing 17
chr15	78319910	78322687	+	78319910	78321101	3pMXE	0.25	50	50	ENSMUST00000160916.8	ENSMUSG00000033287.17	Kctd17	chr15	protein_coding	potassium channel tetramerisation domain containing 17
chr15	78319910	78321784	+	78319910	78321101	A3SS	0.25	50	50	ENSMUST00000160916.8	ENSMUSG00000033287.17	Kctd17	chr15	protein_coding	potassium channel tetramerisation domain containing 17
chr15	78321194	78321784	+	78321194	78321358	3pMXE	0.33	50	50	ENSMUST00000162605.2	ENSMUSG00000033287.17	Kctd17	chr15	protein_coding	potassium channel tetramerisation domain containing 17
chr15	78326753	78328296	-	78326753;78328045	78327877;78328296	ES	0.33	50	50	ENSMUST00000017086.5	ENSMUSG00000016942.7	Tmprss6	chr15	protein_coding	transmembrane serine protease 6
chr15	78328031	78328296	-	78328045	78328296	A3SS	0.33	50	50	ENSMUST00000017086.5	ENSMUSG00000016942.7	Tmprss6	chr15	protein_coding	transmembrane serine protease 6
chr15	78349508	78352626	-	78349543	78352626	A3SS	0.33	50	50	ENSMUST00000017086.5	ENSMUSG00000016942.7	Tmprss6	chr15	protein_coding	transmembrane serine protease 6
chr15	78326753;78328031	78327877;78328296	-	78326753	78328296	cassetteExon	0.5	100	100	ENSMUST00000229516.2	ENSMUSG00000016942.7	Tmprss6	chr15	protein_coding	transmembrane serine protease 6
chr15	78326753	78328296	-	78328045	78328296	3pMXE	0.33	50	50	ENSMUST00000230473.2	ENSMUSG00000016942.7	Tmprss6	chr15	protein_coding	transmembrane serine protease 6
chr15	78326753	78328296	-	78328031	78328296	3pMXE	0.33	50	50	ENSMUST00000230159.2	ENSMUSG00000016942.7	Tmprss6	chr15	protein_coding	transmembrane serine protease 6
chr15	78349508	78352626	-	78337104	78352626	A3SS	0.33	50	50	ENSMUST00000229124.2	ENSMUSG00000016942.7	Tmprss6	chr15	protein_coding	transmembrane serine protease 6
chr15	78349543	78352626	-	78337104	78352626	A3SS	0.33	50	50	ENSMUST00000229124.2	ENSMUSG00000016942.7	Tmprss6	chr15	protein_coding	transmembrane serine protease 6
chr15	78337104	78338345	-	78337104	78352626	A5SS	0.5	50	50	ENSMUST00000229124.2	ENSMUSG00000016942.7	Tmprss6	chr15	protein_coding	transmembrane serine protease 6
chr15	78376079	78377864	-	78376079	78379148	A5SS	0.5	50	50	ENSMUST00000089398.9	ENSMUSG00000068227.10	Il2rb	chr15	protein_coding	interleukin 2 receptor, beta chain
chr15	78411668	78415493	-	78411668	78413718	5pMXE	0.33	50	50	ENSMUST00000023075.9	ENSMUSG00000022440.10	C1qtnf6	chr15	protein_coding	C1q and tumor necrosis factor related protein 6
chr15	78411668;78413599	78413426;78413718	-	78411668	78413718	cassetteExon	0.5	100	100	ENSMUST00000023075.9	ENSMUSG00000022440.10	C1qtnf6	chr15	protein_coding	C1q and tumor necrosis factor related protein 6
chr15	78409387	78411428	-	78409598	78411428	A3SS	0.5	50	50	ENSMUST00000023075.9	ENSMUSG00000022440.10	C1qtnf6	chr15	protein_coding	C1q and tumor necrosis factor related protein 6
chr15	78409387;78409598	78409554;78411428	-	78409387	78411428	cassetteExon	0.5	100	100	ENSMUST00000147093.2	ENSMUSG00000022440.10	C1qtnf6	chr15	protein_coding	C1q and tumor necrosis factor related protein 6
chr15	78411668	78413426	-	78411668	78415493	A5SS	0.33	50	50	ENSMUST00000230943.2	ENSMUSG00000022440.10	C1qtnf6	chr15	protein_coding	C1q and tumor necrosis factor related protein 6
chr15	78424785	78427197	-	78424785	78428003	A5SS	0.5	50	50	ENSMUST00000053239.4	ENSMUSG00000044933.4	Sstr3	chr15	protein_coding	somatostatin receptor 3
chr15	78450231	78454878	-	78450231	78454932	A5SS	0.5	50	50	ENSMUST00000043214.8	ENSMUSG00000033220.8	Rac2	chr15	protein_coding	Rac family small GTPase 2
chr15	78486975	78490047	+	78486975;78488900	78488836;78490047	ES	0.33	50	50	ENSMUST00000043069.6	ENSMUSG00000018008.9	Cyth4	chr15	protein_coding	cytohesin 4
chr15	78490113	78492326	+	78490113;78491275	78491157;78492326	ES	0.5	50	50	ENSMUST00000043069.6	ENSMUSG00000018008.9	Cyth4	chr15	protein_coding	cytohesin 4
chr15	78481419;78482575	78482454;78486893	+	78481419	78486893	cassetteExon	0.5	100	100	ENSMUST00000043069.6	ENSMUSG00000018008.9	Cyth4	chr15	protein_coding	cytohesin 4
chr15	78488900	78489060	+	78488900	78490047	A3SS	0.5	50	50	ENSMUST00000043069.6	ENSMUSG00000018008.9	Cyth4	chr15	protein_coding	cytohesin 4
chr15	78494074	78495622	+	78494074	78495649	A3SS	0.5	50	50	ENSMUST00000043069.6	ENSMUSG00000018008.9	Cyth4	chr15	protein_coding	cytohesin 4
chr15	78481533	78486893	+	78481419	78486893	A5SS	0.33	50	50	ENSMUST00000043069.6	ENSMUSG00000018008.9	Cyth4	chr15	protein_coding	cytohesin 4
chr15	78486975	78490047	+	78486975	78488836	3pMXE	0.5	50	50	ENSMUST00000231180.2	ENSMUSG00000018008.9	Cyth4	chr15	protein_coding	cytohesin 4
chr15	78481533	78486893	+	78482575	78486893	A5SS&ES	0.33	50	50	ENSMUST00000230705.2	ENSMUSG00000018008.9	Cyth4	chr15	protein_coding	cytohesin 4
chr15	78481419;78486975	78486893;78490047	+	78481419	78490047	cassetteExon	0.5	100	100	ENSMUST00000229256.2	ENSMUSG00000018008.9	Cyth4	chr15	protein_coding	cytohesin 4
chr15	78481419	78482454	+	78481419	78490047	A3SS	0.33	50	50	ENSMUST00000229256.2	ENSMUSG00000018008.9	Cyth4	chr15	protein_coding	cytohesin 4
chr15	78488900	78490047	+	78481419	78490047	A5SS	0.33	50	50	ENSMUST00000229256.2	ENSMUSG00000018008.9	Cyth4	chr15	protein_coding	cytohesin 4
chr15	78481419	78490047	+	78481419	78486893	3pMXE	0.33	50	50	ENSMUST00000230041.2	ENSMUSG00000018008.9	Cyth4	chr15	protein_coding	cytohesin 4
chr15	78558940	78602604	-	78558940	78602187	5pMXE	0.25	50	50	ENSMUST00000229441.2	ENSMUSG00000043460.8	Elfn2	chr15	protein_coding	leucine rich repeat and fibronectin type III, extracellular 2
chr15	78558940	78559374	-	78558940	78602187	A5SS	0.25	50	50	ENSMUST00000229441.2	ENSMUSG00000043460.8	Elfn2	chr15	protein_coding	leucine rich repeat and fibronectin type III, extracellular 2
chr15	78558940	78594826	-	78558940	78602187	A5SS	0.25	50	50	ENSMUST00000229441.2	ENSMUSG00000043460.8	Elfn2	chr15	protein_coding	leucine rich repeat and fibronectin type III, extracellular 2
chr15	78558940	78559374	-	78558940	78602604	A5SS	0.25	50	50	ENSMUST00000088592.6	ENSMUSG00000043460.8	Elfn2	chr15	protein_coding	leucine rich repeat and fibronectin type III, extracellular 2
chr15	78558940	78594826	-	78558940	78602604	A5SS	0.25	50	50	ENSMUST00000088592.6	ENSMUSG00000043460.8	Elfn2	chr15	protein_coding	leucine rich repeat and fibronectin type III, extracellular 2
chr15	78558940	78594826	-	78558940	78559374	5pMXE	0.25	50	50	ENSMUST00000230478.2	ENSMUSG00000043460.8	Elfn2	chr15	protein_coding	leucine rich repeat and fibronectin type III, extracellular 2
chr15	78648674	78651018	-	78648668	78651018	A3SS	0.5	50	50	ENSMUST00000018313.6	ENSMUSG00000018169.13	Mfng	chr15	protein_coding	MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
chr15	78651390	78654895	-	78651390	78657218	A5SS	0.5	50	50	ENSMUST00000018313.6	ENSMUSG00000018169.13	Mfng	chr15	protein_coding	MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
chr15	78674056	78674527	-	78674056	78675241	A5SS	0.5	50	50	ENSMUST00000164826.8	ENSMUSG00000033170.15	Card10	chr15	protein_coding	caspase recruitment domain family, member 10
chr15	78773310	78773920	+	78773310	78773916	A3SS	0.5	50	50	ENSMUST00000041587.8	ENSMUSG00000033128.10	Gga1	chr15	protein_coding	golgi associated, gamma adaptin ear containing, ARF binding protein 1
chr15	78767370	78767468	+	78766403	78767468	A5SS	0.5	50	50	ENSMUST00000041587.8	ENSMUSG00000033128.10	Gga1	chr15	protein_coding	golgi associated, gamma adaptin ear containing, ARF binding protein 1
chr15	78777552	78777739	+	78777536	78777739	A5SS	0.5	50	50	ENSMUST00000041587.8	ENSMUSG00000033128.10	Gga1	chr15	protein_coding	golgi associated, gamma adaptin ear containing, ARF binding protein 1
chr15	78787165	78787753	+	78787165;78787335	78787259;78787753	ES	0.5	50	50	ENSMUST00000134703.8	ENSMUSG00000116069.2	Gm49510	chr15	protein_coding	predicted gene, 49510
chr15	78784161;78785388	78785346;78785599	+	78784161	78785599	cassetteExon	0.5	100	100	ENSMUST00000134703.8	ENSMUSG00000116069.2	Gm49510	chr15	protein_coding	predicted gene, 49510
chr15	78794299	78795539	+	78794299	78802330	A3SS	0.33	50	50	ENSMUST00000134703.8	ENSMUSG00000116069.2	Gm49510	chr15	protein_coding	predicted gene, 49510
chr15	78794299	78796130	+	78794299	78802330	A3SS	0.33	50	50	ENSMUST00000134703.8	ENSMUSG00000116069.2	Gm49510	chr15	protein_coding	predicted gene, 49510
chr15	78798731	78802330	+	78794299	78802330	A5SS	0.5	50	50	ENSMUST00000134703.8	ENSMUSG00000116069.2	Gm49510	chr15	protein_coding	predicted gene, 49510
chr15	78794293;78795911	78795733;78796130	+	78794293	78796130	cassetteExon	0.5	100	100	ENSMUST00000061239.14	ENSMUSG00000022436.17	Sh3bp1	chr15	protein_coding	SH3-domain binding protein 1
chr15	78784660	78785346	+	78784161	78785346	A5SS	0.5	50	50	ENSMUST00000061239.14	ENSMUSG00000022436.17	Sh3bp1	chr15	protein_coding	SH3-domain binding protein 1
chr15	78794299	78796130	+	78794293	78796130	A5SS	0.33	50	50	ENSMUST00000061239.14	ENSMUSG00000022436.17	Sh3bp1	chr15	protein_coding	SH3-domain binding protein 1
chr15	78794299	78796130	+	78795911	78796130	A5SS&ES	0.33	50	50	ENSMUST00000132047.8	ENSMUSG00000022436.17	Sh3bp1	chr15	protein_coding	SH3-domain binding protein 1
chr15	78794299;78795911	78795539;78796130	+	78794299	78796130	cassetteExon	0.5	100	100	ENSMUST00000109698.9	ENSMUSG00000022436.17	Sh3bp1	chr15	protein_coding	SH3-domain binding protein 1
chr15	78794299	78796130	+	78794299	78795539	A3SS	0.33	50	50	ENSMUST00000001226.11	ENSMUSG00000022436.17	Sh3bp1	chr15	protein_coding	SH3-domain binding protein 1
chr15	78812249;78812867	78812765;78813833	+	78812249	78813833	cassetteExon	0.5	100	100	ENSMUST00000089377.6	ENSMUSG00000068220.7	Lgals1	chr15	protein_coding	lectin, galactose binding, soluble 1
chr15	78821382	78824266	+	78821382;78822150	78822008;78824266	ES	0.5	50	50	ENSMUST00000138880.9	ENSMUSG00000033099.11	Nol12	chr15	protein_coding	nucleolar protein 12
chr15	78819894	78820679	+	78819275	78820679	A5SS	0.33	50	50	ENSMUST00000138880.9	ENSMUSG00000033099.11	Nol12	chr15	protein_coding	nucleolar protein 12
chr15	78820099	78820679	+	78819275	78820679	A5SS	0.33	50	50	ENSMUST00000138880.9	ENSMUSG00000033099.11	Nol12	chr15	protein_coding	nucleolar protein 12
chr15	78821382	78824266	+	78821382	78822008	3pMXE	0.5	50	50	ENSMUST00000145157.2	ENSMUSG00000033099.11	Nol12	chr15	protein_coding	nucleolar protein 12
chr15	78819894;78820099	78820009;78820679	+	78819894	78820679	cassetteExon	0.5	100	100	ENSMUST00000145157.2	ENSMUSG00000033099.11	Nol12	chr15	protein_coding	nucleolar protein 12
chr15	78832613	78835104	+	78832538	78835104	A5SS	0.5	50	50	ENSMUST00000140228.8	ENSMUSG00000033088.20	Triobp	chr15	protein_coding	TRIO and F-actin binding protein
chr15	78858492	78872092	+	78858492;78860744	78860667;78872092	ES	0.2	50	50	ENSMUST00000109689.9	ENSMUSG00000033088.20	Triobp	chr15	protein_coding	TRIO and F-actin binding protein
chr15	78860744;78862951	78862814;78872092	+	78860744	78872092	cassetteExon	0.5	100	100	ENSMUST00000109689.9	ENSMUSG00000033088.20	Triobp	chr15	protein_coding	TRIO and F-actin binding protein
chr15	78878352	78878498	+	78878352	78883997	A3SS	0.5	50	50	ENSMUST00000109689.9	ENSMUSG00000033088.20	Triobp	chr15	protein_coding	TRIO and F-actin binding protein
chr15	78867408	78872092	+	78860744	78872092	A5SS	0.2	50	50	ENSMUST00000109689.9	ENSMUSG00000033088.20	Triobp	chr15	protein_coding	TRIO and F-actin binding protein
chr15	78867982	78872092	+	78860744	78872092	A5SS	0.2	50	50	ENSMUST00000109689.9	ENSMUSG00000033088.20	Triobp	chr15	protein_coding	TRIO and F-actin binding protein
chr15	78875286	78875529	+	78875274	78875529	A5SS	0.5	50	50	ENSMUST00000109689.9	ENSMUSG00000033088.20	Triobp	chr15	protein_coding	TRIO and F-actin binding protein
chr15	78867408	78872092	+	78862951	78872092	A5SS	0.2	50	50	ENSMUST00000109690.11	ENSMUSG00000033088.20	Triobp	chr15	protein_coding	TRIO and F-actin binding protein
chr15	78867982	78872092	+	78862951	78872092	A5SS	0.2	50	50	ENSMUST00000109690.11	ENSMUSG00000033088.20	Triobp	chr15	protein_coding	TRIO and F-actin binding protein
chr15	78862951	78872092	+	78858492	78872092	A5SS	0.2	50	50	ENSMUST00000229270.2	ENSMUSG00000033088.20	Triobp	chr15	protein_coding	TRIO and F-actin binding protein
chr15	78867408	78872092	+	78858492	78872092	A5SS	0.2	50	50	ENSMUST00000229270.2	ENSMUSG00000033088.20	Triobp	chr15	protein_coding	TRIO and F-actin binding protein
chr15	78867982	78872092	+	78858492	78872092	A5SS	0.2	50	50	ENSMUST00000229270.2	ENSMUSG00000033088.20	Triobp	chr15	protein_coding	TRIO and F-actin binding protein
chr15	78867982	78872092	+	78867408	78872092	A5SS	0.2	50	50	ENSMUST00000109687.9	ENSMUSG00000033088.20	Triobp	chr15	protein_coding	TRIO and F-actin binding protein
chr15	78901332	78907681	-	78901332	78909696	A5SS	0.5	50	50	ENSMUST00000229708.2	ENSMUSG00000115867.2	Gm17753	chr15	lncRNA	predicted gene, 17753
chr15	78921074	78926128	+	78921074	78921343	3pMXE	0.5	50	50	ENSMUST00000006544.9	ENSMUSG00000006378.16	Gcat	chr15	protein_coding	glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)
chr15	78917711	78918131	+	78915320	78918131	A5SS	0.5	50	50	ENSMUST00000006544.9	ENSMUSG00000006378.16	Gcat	chr15	protein_coding	glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)
chr15	78940285	78945364	-	78940285;78942253	78942155;78945364	ES	0.33	50	50	ENSMUST00000040676.11	ENSMUSG00000033055.13	Ankrd54	chr15	protein_coding	ankyrin repeat domain 54
chr15	78938284;78938514	78938466;78938696	-	78938284	78938696	cassetteExon	0.5	100	100	ENSMUST00000040676.11	ENSMUSG00000033055.13	Ankrd54	chr15	protein_coding	ankyrin repeat domain 54
chr15	78938827	78939492	-	78938803	78939492	A3SS	0.5	50	50	ENSMUST00000040676.11	ENSMUSG00000033055.13	Ankrd54	chr15	protein_coding	ankyrin repeat domain 54
chr15	78942248	78945364	-	78942253	78945364	A3SS	0.33	50	50	ENSMUST00000040676.11	ENSMUSG00000033055.13	Ankrd54	chr15	protein_coding	ankyrin repeat domain 54
chr15	78940285	78945364	-	78940285;78942248	78942155;78945364	ES	0.33	50	50	ENSMUST00000153003.3	ENSMUSG00000033055.13	Ankrd54	chr15	protein_coding	ankyrin repeat domain 54
chr15	78959560	78959971	+	78959492	78959971	A5SS	0.5	50	50	ENSMUST00000040518.6	ENSMUSG00000033047.6	Eif3l	chr15	protein_coding	eukaryotic translation initiation factor 3, subunit L
chr15	79006987	79008701	+	79007186	79008701	A5SS	0.5	50	50	ENSMUST00000229113.2	ENSMUSG00000033039.11	Micall1	chr15	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing -like 1
chr15	78999371	79004959	+	78999371;79004027	79003936;79004959	ES	0.5	50	50	ENSMUST00000040320.10	ENSMUSG00000033039.11	Micall1	chr15	protein_coding	microtubule associated monooxygenase, calponin and LIM domain containing -like 1
chr15	79019965;79020689	79020507;79023438	-	79019965	79023438	cassetteExon	0.5	100	100	ENSMUST00000187550.7	ENSMUSG00000033029.13	1700088E04Rik	chr15	protein_coding	RIKEN cDNA 1700088E04 gene
chr15	79019965;79020689	79020507;79025081	-	79019965;79023500	79023438;79025081	MXE	0.5	100	100	ENSMUST00000187550.7	ENSMUSG00000033029.13	1700088E04Rik	chr15	protein_coding	RIKEN cDNA 1700088E04 gene
chr15	79023500;79024039	79023907;79025081	-	79023500	79025081	cassetteExon	0.5	100	100	ENSMUST00000187550.7	ENSMUSG00000033029.13	1700088E04Rik	chr15	protein_coding	RIKEN cDNA 1700088E04 gene
chr15	79021883	79023438	-	79019965	79023438	A3SS	0.2	50	50	ENSMUST00000187550.7	ENSMUSG00000033029.13	1700088E04Rik	chr15	protein_coding	RIKEN cDNA 1700088E04 gene
chr15	79021920	79023438	-	79019965	79023438	A3SS	0.2	50	50	ENSMUST00000187550.7	ENSMUSG00000033029.13	1700088E04Rik	chr15	protein_coding	RIKEN cDNA 1700088E04 gene
chr15	79021923	79023438	-	79019965	79023438	A3SS	0.2	50	50	ENSMUST00000187550.7	ENSMUSG00000033029.13	1700088E04Rik	chr15	protein_coding	RIKEN cDNA 1700088E04 gene
chr15	79023500	79024969	-	79023500	79025081	A5SS	0.33	50	50	ENSMUST00000187550.7	ENSMUSG00000033029.13	1700088E04Rik	chr15	protein_coding	RIKEN cDNA 1700088E04 gene
chr15	79020689	79025081	-	79020689;79023500	79023438;79025081	ES	0.33	50	50	ENSMUST00000190959.7	ENSMUSG00000033029.13	1700088E04Rik	chr15	protein_coding	RIKEN cDNA 1700088E04 gene
chr15	79021883	79023438	-	79020689	79023438	A3SS	0.2	50	50	ENSMUST00000190959.7	ENSMUSG00000033029.13	1700088E04Rik	chr15	protein_coding	RIKEN cDNA 1700088E04 gene
chr15	79021920	79023438	-	79020689	79023438	A3SS	0.2	50	50	ENSMUST00000190959.7	ENSMUSG00000033029.13	1700088E04Rik	chr15	protein_coding	RIKEN cDNA 1700088E04 gene
chr15	79021923	79023438	-	79020689	79023438	A3SS	0.2	50	50	ENSMUST00000190959.7	ENSMUSG00000033029.13	1700088E04Rik	chr15	protein_coding	RIKEN cDNA 1700088E04 gene
chr15	79020689	79025355	-	79020689	79023438	A5SS&ES	0.33	50	50	ENSMUST00000190959.7	ENSMUSG00000033029.13	1700088E04Rik	chr15	protein_coding	RIKEN cDNA 1700088E04 gene
chr15	79025192	79025316	-	79025192	79025355	A5SS	0.5	50	50	ENSMUST00000169604.8	ENSMUSG00000033029.13	1700088E04Rik	chr15	protein_coding	RIKEN cDNA 1700088E04 gene
chr15	79024039	79025081	-	79020689	79025081	A3SS	0.33	50	50	ENSMUST00000190509.7	ENSMUSG00000033029.13	1700088E04Rik	chr15	protein_coding	RIKEN cDNA 1700088E04 gene
chr15	79020689	79025355	-	79020689	79025081	A5SS&ES	0.33	50	50	ENSMUST00000190509.7	ENSMUSG00000033029.13	1700088E04Rik	chr15	protein_coding	RIKEN cDNA 1700088E04 gene
chr15	79019965	79023438	-	79019965	79020507	5pMXE	0.5	50	50	ENSMUST00000186559.7	ENSMUSG00000033029.13	1700088E04Rik	chr15	protein_coding	RIKEN cDNA 1700088E04 gene
chr15	79019965;79020689	79020507;79025355	-	79019965;79025192	79023438;79025355	MXE	0.5	100	100	ENSMUST00000190730.7	ENSMUSG00000033029.13	1700088E04Rik	chr15	protein_coding	RIKEN cDNA 1700088E04 gene
chr15	79020689;79025192	79025081;79025355	-	79020689	79025355	cassetteExon	0.5	100	100	ENSMUST00000188562.7	ENSMUSG00000033029.13	1700088E04Rik	chr15	protein_coding	RIKEN cDNA 1700088E04 gene
chr15	79023500	79023907	-	79023500	79024969	A5SS	0.33	50	50	ENSMUST00000189761.7	ENSMUSG00000033029.13	1700088E04Rik	chr15	protein_coding	RIKEN cDNA 1700088E04 gene
chr15	79021883	79023438	-	79021923	79023438	A3SS	0.33	50	50	ENSMUST00000186459.7	ENSMUSG00000033029.13	1700088E04Rik	chr15	protein_coding	RIKEN cDNA 1700088E04 gene
chr15	79021920	79023438	-	79021923	79023438	A3SS	0.33	50	50	ENSMUST00000186459.7	ENSMUSG00000033029.13	1700088E04Rik	chr15	protein_coding	RIKEN cDNA 1700088E04 gene
chr15	79021920	79023438	-	79021883	79023438	A3SS	0.2	50	50	ENSMUST00000186053.7	ENSMUSG00000033029.13	1700088E04Rik	chr15	protein_coding	RIKEN cDNA 1700088E04 gene
chr15	79030338	79035536	+	79030383	79035536	A5SS	0.5	50	50	ENSMUST00000230271.2	ENSMUSG00000033020.8	Polr2f	chr15	protein_coding	polymerase (RNA) II (DNA directed) polypeptide F
chr15	79035673	79035789	+	79035607	79035789	A5SS	0.5	50	50	ENSMUST00000230271.2	ENSMUSG00000033020.8	Polr2f	chr15	protein_coding	polymerase (RNA) II (DNA directed) polypeptide F
chr15	79043603	79048482	-	79043603;79047994	79047489;79048482	ES	0.5	50	50	ENSMUST00000230532.2	ENSMUSG00000033006.11	Sox10	chr15	protein_coding	SRY (sex determining region Y)-box 10
chr15	79047994	79048482	-	79043603	79048482	A3SS	0.5	50	50	ENSMUST00000230261.2	ENSMUSG00000033006.11	Sox10	chr15	protein_coding	SRY (sex determining region Y)-box 10
chr15	79043603	79047489	-	79043603	79048482	A5SS	0.5	50	50	ENSMUST00000230261.2	ENSMUSG00000033006.11	Sox10	chr15	protein_coding	SRY (sex determining region Y)-box 10
chr15	79050379	79100310	+	79050379;79094449	79094391;79100310	ES	0.33	50	50	ENSMUST00000131710.8	ENSMUSG00000075555.13	Gm10863	chr15	lncRNA	predicted gene 10863
chr15	79050379;79085811	79085378;79094391	+	79050379	79094391	cassetteExon	0.5	100	100	ENSMUST00000131710.8	ENSMUSG00000075555.13	Gm10863	chr15	lncRNA	predicted gene 10863
chr15	79050379	79056920	+	79050379	79094391	A3SS	0.25	50	50	ENSMUST00000131710.8	ENSMUSG00000075555.13	Gm10863	chr15	lncRNA	predicted gene 10863
chr15	79093613	79094391	+	79050379	79094391	A5SS	0.25	50	50	ENSMUST00000131710.8	ENSMUSG00000075555.13	Gm10863	chr15	lncRNA	predicted gene 10863
chr15	79094245	79094391	+	79050379	79094391	A5SS	0.25	50	50	ENSMUST00000131710.8	ENSMUSG00000075555.13	Gm10863	chr15	lncRNA	predicted gene 10863
chr15	79094245	79100310	+	79094449	79100310	A5SS&ES	0.33	50	50	ENSMUST00000131710.8	ENSMUSG00000075555.13	Gm10863	chr15	lncRNA	predicted gene 10863
chr15	79050379	79056920	+	79050379	79085378	A3SS	0.25	50	50	ENSMUST00000130745.8	ENSMUSG00000075555.13	Gm10863	chr15	lncRNA	predicted gene 10863
chr15	79093613	79094391	+	79085811	79094391	A5SS	0.25	50	50	ENSMUST00000130745.8	ENSMUSG00000075555.13	Gm10863	chr15	lncRNA	predicted gene 10863
chr15	79094245	79094391	+	79085811	79094391	A5SS	0.25	50	50	ENSMUST00000130745.8	ENSMUSG00000075555.13	Gm10863	chr15	lncRNA	predicted gene 10863
chr15	79094245	79100310	+	79094245;79094449	79094391;79100310	ES	0.33	50	50	ENSMUST00000147620.8	ENSMUSG00000075555.13	Gm10863	chr15	lncRNA	predicted gene 10863
chr15	79050379;79085811	79085378;79094391	+	79050379;79094245	79056920;79094391	MXE	0.5	100	100	ENSMUST00000147620.8	ENSMUSG00000075555.13	Gm10863	chr15	lncRNA	predicted gene 10863
chr15	79093613	79094391	+	79094245	79094391	A5SS&ES	0.25	50	50	ENSMUST00000147620.8	ENSMUSG00000075555.13	Gm10863	chr15	lncRNA	predicted gene 10863
chr15	79050379	79056920	+	79050379	79100310	A3SS	0.25	50	50	ENSMUST00000144651.8	ENSMUSG00000075555.13	Gm10863	chr15	lncRNA	predicted gene 10863
chr15	79050379	79085378	+	79050379	79100310	A3SS	0.25	50	50	ENSMUST00000144651.8	ENSMUSG00000075555.13	Gm10863	chr15	lncRNA	predicted gene 10863
chr15	79094245	79100310	+	79050379	79100310	A5SS	0.33	50	50	ENSMUST00000144651.8	ENSMUSG00000075555.13	Gm10863	chr15	lncRNA	predicted gene 10863
chr15	79123912	79127168	+	79123912;79125493	79125427;79127168	ES	0.5	50	50	ENSMUST00000163571.8	ENSMUSG00000068206.14	Pick1	chr15	protein_coding	protein interacting with C kinase 1
chr15	79132496	79139682	+	79132496	79132921	3pMXE	0.5	50	50	ENSMUST00000163571.8	ENSMUSG00000068206.14	Pick1	chr15	protein_coding	protein interacting with C kinase 1
chr15	79113770	79113950	+	79113620	79113950	A5SS	0.5	50	50	ENSMUST00000163571.8	ENSMUSG00000068206.14	Pick1	chr15	protein_coding	protein interacting with C kinase 1
chr15	79123912	79127168	+	79123912	79125427	3pMXE	0.5	50	50	ENSMUST00000171365.2	ENSMUSG00000068206.14	Pick1	chr15	protein_coding	protein interacting with C kinase 1
chr15	79142852	79143388	-	79142852;79143047	79143004;79143388	ES	0.5	50	50	ENSMUST00000165408.8	ENSMUSG00000018126.16	Baiap2l2	chr15	protein_coding	BAI1-associated protein 2-like 2
chr15	79186897	79189903	-	79186897;79188669	79188505;79189903	ES	0.5	50	50	ENSMUST00000174021.8	ENSMUSG00000042632.18	Pla2g6	chr15	protein_coding	phospholipase A2, group VI
chr15	79202210	79212289	-	79202210	79211835	5pMXE	0.2	50	50	ENSMUST00000174021.8	ENSMUSG00000042632.18	Pla2g6	chr15	protein_coding	phospholipase A2, group VI
chr15	79202210	79212410	-	79202210	79211835	5pMXE	0.2	50	50	ENSMUST00000174021.8	ENSMUSG00000042632.18	Pla2g6	chr15	protein_coding	phospholipase A2, group VI
chr15	79186897;79187802	79187774;79188505	-	79186897	79188505	cassetteExon	0.5	100	100	ENSMUST00000174021.8	ENSMUSG00000042632.18	Pla2g6	chr15	protein_coding	phospholipase A2, group VI
chr15	79202210	79207475	-	79202210	79211835	A5SS	0.2	50	50	ENSMUST00000174021.8	ENSMUSG00000042632.18	Pla2g6	chr15	protein_coding	phospholipase A2, group VI
chr15	79202210	79208452	-	79202210	79211835	A5SS	0.2	50	50	ENSMUST00000174021.8	ENSMUSG00000042632.18	Pla2g6	chr15	protein_coding	phospholipase A2, group VI
chr15	79186897	79187774	-	79186897	79189903	A5SS	0.33	50	50	ENSMUST00000166977.9	ENSMUSG00000042632.18	Pla2g6	chr15	protein_coding	phospholipase A2, group VI
chr15	79202210	79212289	-	79202210;79211914	79211835;79212289	ES	0.5	50	50	ENSMUST00000173163.8	ENSMUSG00000042632.18	Pla2g6	chr15	protein_coding	phospholipase A2, group VI
chr15	79211914	79212410	-	79211914	79212289	5pMXE	0.5	50	50	ENSMUST00000173163.8	ENSMUSG00000042632.18	Pla2g6	chr15	protein_coding	phospholipase A2, group VI
chr15	79202210	79207475	-	79202210	79212289	A5SS	0.2	50	50	ENSMUST00000047816.15	ENSMUSG00000042632.18	Pla2g6	chr15	protein_coding	phospholipase A2, group VI
chr15	79202210	79208452	-	79202210	79212289	A5SS	0.2	50	50	ENSMUST00000047816.15	ENSMUSG00000042632.18	Pla2g6	chr15	protein_coding	phospholipase A2, group VI
chr15	79202210	79212410	-	79202210	79212289	A5SS	0.2	50	50	ENSMUST00000047816.15	ENSMUSG00000042632.18	Pla2g6	chr15	protein_coding	phospholipase A2, group VI
chr15	79202210	79212410	-	79202210;79211914	79211835;79212410	ES	0.5	50	50	ENSMUST00000172403.9	ENSMUSG00000042632.18	Pla2g6	chr15	protein_coding	phospholipase A2, group VI
chr15	79186897	79188505	-	79187802	79188505	3pMXE	0.5	50	50	ENSMUST00000173412.2	ENSMUSG00000042632.18	Pla2g6	chr15	protein_coding	phospholipase A2, group VI
chr15	79202210	79207475	-	79202210	79212410	A5SS	0.2	50	50	ENSMUST00000173632.8	ENSMUSG00000042632.18	Pla2g6	chr15	protein_coding	phospholipase A2, group VI
chr15	79202210	79208452	-	79202210	79212410	A5SS	0.2	50	50	ENSMUST00000173632.8	ENSMUSG00000042632.18	Pla2g6	chr15	protein_coding	phospholipase A2, group VI
chr15	79202210	79208452	-	79202210	79207475	5pMXE	0.2	50	50	ENSMUST00000173109.2	ENSMUSG00000042632.18	Pla2g6	chr15	protein_coding	phospholipase A2, group VI
chr15	79231954	79241167	+	79230974	79241167	A5SS	0.25	50	50	ENSMUST00000229130.2	ENSMUSG00000042622.15	Maff	chr15	protein_coding	v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)
chr15	79232446	79241167	+	79230974	79241167	A5SS	0.25	50	50	ENSMUST00000229130.2	ENSMUSG00000042622.15	Maff	chr15	protein_coding	v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)
chr15	79232900	79241167	+	79230974	79241167	A5SS	0.25	50	50	ENSMUST00000229130.2	ENSMUSG00000042622.15	Maff	chr15	protein_coding	v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)
chr15	79232446	79241167	+	79231954	79241167	A5SS	0.25	50	50	ENSMUST00000096350.11	ENSMUSG00000042622.15	Maff	chr15	protein_coding	v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)
chr15	79232900	79241167	+	79231954	79241167	A5SS	0.25	50	50	ENSMUST00000096350.11	ENSMUSG00000042622.15	Maff	chr15	protein_coding	v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)
chr15	79232900	79241167	+	79232446	79241167	A5SS	0.25	50	50	ENSMUST00000163691.3	ENSMUSG00000042622.15	Maff	chr15	protein_coding	v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)
chr15	79247085;79247878	79247858;79249485	-	79247085	79249485	cassetteExon	0.5	100	100	ENSMUST00000074991.10	ENSMUSG00000009035.16	Tmem184b	chr15	protein_coding	transmembrane protein 184b
chr15	79262913	79280876	-	79262913	79287385	A5SS	0.25	50	50	ENSMUST00000074991.10	ENSMUSG00000009035.16	Tmem184b	chr15	protein_coding	transmembrane protein 184b
chr15	79262913	79287006	-	79262913	79287385	A5SS	0.25	50	50	ENSMUST00000074991.10	ENSMUSG00000009035.16	Tmem184b	chr15	protein_coding	transmembrane protein 184b
chr15	79262913	79287047	-	79262913	79287385	A5SS	0.25	50	50	ENSMUST00000074991.10	ENSMUSG00000009035.16	Tmem184b	chr15	protein_coding	transmembrane protein 184b
chr15	79262913	79280876	-	79262913	79287047	A5SS	0.25	50	50	ENSMUST00000178522.3	ENSMUSG00000009035.16	Tmem184b	chr15	protein_coding	transmembrane protein 184b
chr15	79262913	79287006	-	79262913	79287047	A5SS	0.25	50	50	ENSMUST00000178522.3	ENSMUSG00000009035.16	Tmem184b	chr15	protein_coding	transmembrane protein 184b
chr15	79262913	79287385	-	79254188	79287385	A3SS	0.5	50	50	ENSMUST00000231076.2	ENSMUSG00000009035.16	Tmem184b	chr15	protein_coding	transmembrane protein 184b
chr15	79254188	79261247	-	79254188	79287385	A5SS	0.5	50	50	ENSMUST00000231076.2	ENSMUSG00000009035.16	Tmem184b	chr15	protein_coding	transmembrane protein 184b
chr15	79262913	79287006	-	79262913	79280876	5pMXE	0.25	50	50	ENSMUST00000228472.2	ENSMUSG00000009035.16	Tmem184b	chr15	protein_coding	transmembrane protein 184b
chr15	79308455	79309040	-	79305210	79309040	A3SS	0.5	50	50	ENSMUST00000117786.9	ENSMUSG00000022433.22	Csnk1e	chr15	protein_coding	casein kinase 1, epsilon
chr15	79323059	79326128	-	79323055	79326128	A3SS	0.5	50	50	ENSMUST00000117786.9	ENSMUSG00000022433.22	Csnk1e	chr15	protein_coding	casein kinase 1, epsilon
chr15	79314365	79317265	-	79314365	79322972	A5SS	0.5	50	50	ENSMUST00000117786.9	ENSMUSG00000022433.22	Csnk1e	chr15	protein_coding	casein kinase 1, epsilon
chr15	79323055	79325961	-	79323055	79326128	A5SS	0.5	50	50	ENSMUST00000117786.9	ENSMUSG00000022433.22	Csnk1e	chr15	protein_coding	casein kinase 1, epsilon
chr15	79323059	79326293	-	79323059	79326128	5pMXE	0.2	50	50	ENSMUST00000120859.9	ENSMUSG00000022433.22	Csnk1e	chr15	protein_coding	casein kinase 1, epsilon
chr15	79323059	79327748	-	79323059	79326128	5pMXE	0.2	50	50	ENSMUST00000120859.9	ENSMUSG00000022433.22	Csnk1e	chr15	protein_coding	casein kinase 1, epsilon
chr15	79323059	79339691	-	79323059	79326128	5pMXE	0.2	50	50	ENSMUST00000120859.9	ENSMUSG00000022433.22	Csnk1e	chr15	protein_coding	casein kinase 1, epsilon
chr15	79323059	79325421	-	79323059	79326128	A5SS	0.2	50	50	ENSMUST00000120859.9	ENSMUSG00000022433.22	Csnk1e	chr15	protein_coding	casein kinase 1, epsilon
chr15	79323059	79326293	-	79323059	79325421	5pMXE	0.2	50	50	ENSMUST00000122044.8	ENSMUSG00000022433.22	Csnk1e	chr15	protein_coding	casein kinase 1, epsilon
chr15	79323059	79327748	-	79323059	79325421	5pMXE	0.2	50	50	ENSMUST00000122044.8	ENSMUSG00000022433.22	Csnk1e	chr15	protein_coding	casein kinase 1, epsilon
chr15	79323059	79339691	-	79323059	79325421	5pMXE	0.2	50	50	ENSMUST00000122044.8	ENSMUSG00000022433.22	Csnk1e	chr15	protein_coding	casein kinase 1, epsilon
chr15	79323059	79326293	-	79323059	79339691	A5SS	0.2	50	50	ENSMUST00000230599.2	ENSMUSG00000022433.22	Csnk1e	chr15	protein_coding	casein kinase 1, epsilon
chr15	79323059	79327748	-	79323059	79339691	A5SS	0.2	50	50	ENSMUST00000230599.2	ENSMUSG00000022433.22	Csnk1e	chr15	protein_coding	casein kinase 1, epsilon
chr15	79323059	79327748	-	79323059	79326293	5pMXE	0.2	50	50	ENSMUST00000230942.2	ENSMUSG00000022433.22	Csnk1e	chr15	protein_coding	casein kinase 1, epsilon
chr15	79417411	79420158	-	79416115	79420158	A3SS	0.5	50	50	ENSMUST00000054014.9	ENSMUSG00000055065.8	Ddx17	chr15	protein_coding	DEAD box helicase 17
chr15	79414718	79415879	-	79414718	79415873	A5SS	0.5	50	50	ENSMUST00000054014.9	ENSMUSG00000055065.8	Ddx17	chr15	protein_coding	DEAD box helicase 17
chr15	79468580	79469299	-	79468580;79469177	79469063;79469299	ES	0.5	50	50	ENSMUST00000023065.8	ENSMUSG00000022429.12	Dmc1	chr15	protein_coding	DNA meiotic recombinase 1
chr15	79477388	79480445	-	79469372	79480445	A3SS	0.5	50	50	ENSMUST00000230011.2	ENSMUSG00000022429.12	Dmc1	chr15	protein_coding	DNA meiotic recombinase 1
chr15	79469372	79469870	-	79469372	79480445	A5SS	0.33	50	50	ENSMUST00000230011.2	ENSMUSG00000022429.12	Dmc1	chr15	protein_coding	DNA meiotic recombinase 1
chr15	79469372	79475806	-	79469372	79480445	A5SS	0.33	50	50	ENSMUST00000230011.2	ENSMUSG00000022429.12	Dmc1	chr15	protein_coding	DNA meiotic recombinase 1
chr15	79473024	79475806	-	79469372	79475806	A3SS	0.5	50	50	ENSMUST00000229408.2	ENSMUSG00000022429.12	Dmc1	chr15	protein_coding	DNA meiotic recombinase 1
chr15	79469372	79469870	-	79469372	79475806	A5SS	0.33	50	50	ENSMUST00000229408.2	ENSMUSG00000022429.12	Dmc1	chr15	protein_coding	DNA meiotic recombinase 1
chr15	79468580	79469063	-	79468580	79469373	A5SS	0.33	50	50	ENSMUST00000230121.2	ENSMUSG00000022429.12	Dmc1	chr15	protein_coding	DNA meiotic recombinase 1
chr15	79468580	79469299	-	79468580	79469373	A5SS	0.33	50	50	ENSMUST00000230121.2	ENSMUSG00000022429.12	Dmc1	chr15	protein_coding	DNA meiotic recombinase 1
chr15	79514320	79520880	-	79514320;79518347	79518265;79520880	ES	0.5	50	50	ENSMUST00000109648.9	ENSMUSG00000042564.14	Fam227a	chr15	protein_coding	family with sequence similarity 227, member A
chr15	79520987	79524205	-	79520987;79521338	79521215;79524205	ES	0.33	50	50	ENSMUST00000109648.9	ENSMUSG00000042564.14	Fam227a	chr15	protein_coding	family with sequence similarity 227, member A
chr15	79527572	79532938	-	79527572;79528218	79528149;79532938	ES	0.5	50	50	ENSMUST00000109648.9	ENSMUSG00000042564.14	Fam227a	chr15	protein_coding	family with sequence similarity 227, member A
chr15	79510532;79513031	79512958;79514227	-	79510532	79514227	cassetteExon	0.5	100	100	ENSMUST00000109648.9	ENSMUSG00000042564.14	Fam227a	chr15	protein_coding	family with sequence similarity 227, member A
chr15	79505061	79507656	-	79505061	79507656	A3SS	0.5	50	0	ENSMUST00000109648.9	ENSMUSG00000042564.14	Fam227a	chr15	protein_coding	family with sequence similarity 227, member A
chr15	79520967	79524205	-	79521338	79524205	A3SS&ES	0.33	50	50	ENSMUST00000109648.9	ENSMUSG00000042564.14	Fam227a	chr15	protein_coding	family with sequence similarity 227, member A
chr15	79533020	79533838	-	79533032	79533838	A3SS	0.5	50	50	ENSMUST00000109648.9	ENSMUSG00000042564.14	Fam227a	chr15	protein_coding	family with sequence similarity 227, member A
chr15	79534064	79542882	-	79534061	79542882	A3SS	0.5	50	50	ENSMUST00000109648.9	ENSMUSG00000042564.14	Fam227a	chr15	protein_coding	family with sequence similarity 227, member A
chr15	79505055	79505061	-	79505055	79505061	A5SS	1	50	0	ENSMUST00000109648.9	ENSMUSG00000042564.14	Fam227a	chr15	protein_coding	family with sequence similarity 227, member A
chr15	79510532	79512184	-	79510532	79514227	A5SS	0.33	50	50	ENSMUST00000109648.9	ENSMUSG00000042564.14	Fam227a	chr15	protein_coding	family with sequence similarity 227, member A
chr15	79505061	79507656	-	79505056	79507656	A3SS	0.5	50	50	ENSMUST00000187519.7	ENSMUSG00000042564.14	Fam227a	chr15	protein_coding	family with sequence similarity 227, member A
chr15	79520967	79524205	-	79520987	79524205	A3SS	0.33	50	50	ENSMUST00000109646.9	ENSMUSG00000042564.14	Fam227a	chr15	protein_coding	family with sequence similarity 227, member A
chr15	79510532	79512184	-	79510532	79512958	A5SS	0.33	50	50	ENSMUST00000230366.2	ENSMUSG00000042564.14	Fam227a	chr15	protein_coding	family with sequence similarity 227, member A
chr15	79555209	79556098	+	79555209;79555492	79555374;79556098	ES	0.5	50	50	ENSMUST00000023062.5	ENSMUSG00000022427.5	Tomm22	chr15	protein_coding	translocase of outer mitochondrial membrane 22
chr15	79555209	79556098	+	79555492	79556098	5pMXE	0.5	50	50	ENSMUST00000127292.2	ENSMUSG00000022427.5	Tomm22	chr15	protein_coding	translocase of outer mitochondrial membrane 22
chr15	79591373	79592070	+	79591373	79591896	A3SS	0.5	50	50	ENSMUST00000046463.10	ENSMUSG00000042535.10	Gtpbp1	chr15	protein_coding	GTP binding protein 1
chr15	79596420	79597427	+	79596420	79597565	A3SS	0.5	50	50	ENSMUST00000046463.10	ENSMUSG00000042535.10	Gtpbp1	chr15	protein_coding	GTP binding protein 1
chr15	79597679	79600067	+	79597679	79600048	A3SS	0.5	50	50	ENSMUST00000046463.10	ENSMUSG00000042535.10	Gtpbp1	chr15	protein_coding	GTP binding protein 1
chr15	79601974	79603268	+	79601974	79603229	A3SS	0.5	50	50	ENSMUST00000046463.10	ENSMUSG00000042535.10	Gtpbp1	chr15	protein_coding	GTP binding protein 1
chr15	79578214	79578357	+	79575299	79578357	A5SS	0.5	50	50	ENSMUST00000046463.10	ENSMUSG00000042535.10	Gtpbp1	chr15	protein_coding	GTP binding protein 1
chr15	79621360	79622721	-	79621360;79621769	79621674;79622721	ES	0.5	50	50	ENSMUST00000162392.8	ENSMUSG00000042524.15	Sun2	chr15	protein_coding	Sad1 and UNC84 domain containing 2
chr15	79620126	79621267	-	79620120	79621267	A3SS	0.5	50	50	ENSMUST00000162392.8	ENSMUSG00000042524.15	Sun2	chr15	protein_coding	Sad1 and UNC84 domain containing 2
chr15	79624082	79625989	-	79624082	79626540	A5SS	0.25	50	50	ENSMUST00000162392.8	ENSMUSG00000042524.15	Sun2	chr15	protein_coding	Sad1 and UNC84 domain containing 2
chr15	79624082	79626100	-	79624082	79626540	A5SS	0.25	50	50	ENSMUST00000162392.8	ENSMUSG00000042524.15	Sun2	chr15	protein_coding	Sad1 and UNC84 domain containing 2
chr15	79624082	79626204	-	79624082	79626540	A5SS	0.25	50	50	ENSMUST00000162392.8	ENSMUSG00000042524.15	Sun2	chr15	protein_coding	Sad1 and UNC84 domain containing 2
chr15	79624082	79625989	-	79624082	79626204	A5SS	0.25	50	50	ENSMUST00000159660.2	ENSMUSG00000042524.15	Sun2	chr15	protein_coding	Sad1 and UNC84 domain containing 2
chr15	79624082	79626100	-	79624082	79626204	A5SS	0.25	50	50	ENSMUST00000159660.2	ENSMUSG00000042524.15	Sun2	chr15	protein_coding	Sad1 and UNC84 domain containing 2
chr15	79624082	79625989	-	79624082	79626100	A5SS	0.25	50	50	ENSMUST00000162499.2	ENSMUSG00000042524.15	Sun2	chr15	protein_coding	Sad1 and UNC84 domain containing 2
chr15	79646726	79649017	-	79646726;79647794	79647711;79649017	ES	0.5	50	50	ENSMUST00000069877.12	ENSMUSG00000022420.17	Dnal4	chr15	protein_coding	dynein, axonemal, light chain 4
chr15	79649222;79650054	79649988;79658560	-	79649222	79658560	cassetteExon	0.5	100	100	ENSMUST00000069877.12	ENSMUSG00000022420.17	Dnal4	chr15	protein_coding	dynein, axonemal, light chain 4
chr15	79646777	79647711	-	79646726	79647711	A3SS	0.5	50	50	ENSMUST00000069877.12	ENSMUSG00000022420.17	Dnal4	chr15	protein_coding	dynein, axonemal, light chain 4
chr15	79646726	79649017	-	79647794	79649017	A3SS&ES	0.5	50	50	ENSMUST00000230645.2	ENSMUSG00000022420.17	Dnal4	chr15	protein_coding	dynein, axonemal, light chain 4
chr15	79659098	79660123	-	79658823	79660123	A3SS	0.5	50	50	ENSMUST00000162713.9	ENSMUSG00000022420.17	Dnal4	chr15	protein_coding	dynein, axonemal, light chain 4
chr15	79678676	79712889	-	79678676	79688176	5pMXE	0.33	50	50	ENSMUST00000023057.10	ENSMUSG00000022421.21	Nptxr	chr15	protein_coding	neuronal pentraxin receptor
chr15	79678676	79717713	-	79678676	79688176	5pMXE	0.33	50	50	ENSMUST00000023057.10	ENSMUSG00000022421.21	Nptxr	chr15	protein_coding	neuronal pentraxin receptor
chr15	79674646	79675019	-	79674646	79676804	A5SS	0.5	50	50	ENSMUST00000023057.10	ENSMUSG00000022421.21	Nptxr	chr15	protein_coding	neuronal pentraxin receptor
chr15	79678676;79713125	79712889;79717713	-	79678676	79717713	cassetteExon	0.5	100	100	ENSMUST00000023060.13	ENSMUSG00000089837.10	Npcd	chr15	protein_coding	neuronal pentraxin chromo domain
chr15	79678676;79713125	79712889;79717903	-	79678676;79717779	79717713;79717903	MXE	0.5	100	100	ENSMUST00000023060.13	ENSMUSG00000089837.10	Npcd	chr15	protein_coding	neuronal pentraxin chromo domain
chr15	79678676;79713179	79712889;79717713	-	79678676	79717713	cassetteExon	0.5	100	100	ENSMUST00000023060.13	ENSMUSG00000089837.10	Npcd	chr15	protein_coding	neuronal pentraxin chromo domain
chr15	79678676;79713179	79712889;79717903	-	79678676;79717779	79717713;79717903	MXE	0.5	100	100	ENSMUST00000023060.13	ENSMUSG00000089837.10	Npcd	chr15	protein_coding	neuronal pentraxin chromo domain
chr15	79716958	79717713	-	79678676	79717713	A3SS	0.25	50	50	ENSMUST00000023060.13	ENSMUSG00000089837.10	Npcd	chr15	protein_coding	neuronal pentraxin chromo domain
chr15	79713179	79717903	-	79713179;79717779	79717713;79717903	ES	0.33	50	50	ENSMUST00000089299.6	ENSMUSG00000089837.10	Npcd	chr15	protein_coding	neuronal pentraxin chromo domain
chr15	79713125	79717713	-	79713179	79717713	A3SS	0.25	50	50	ENSMUST00000089299.6	ENSMUSG00000089837.10	Npcd	chr15	protein_coding	neuronal pentraxin chromo domain
chr15	79713125	79717903	-	79717779	79717903	A3SS&ES	0.33	50	50	ENSMUST00000089299.6	ENSMUSG00000089837.10	Npcd	chr15	protein_coding	neuronal pentraxin chromo domain
chr15	79716958	79717713	-	79713179	79717713	A3SS	0.25	50	50	ENSMUST00000089299.6	ENSMUSG00000089837.10	Npcd	chr15	protein_coding	neuronal pentraxin chromo domain
chr15	79678676	79717713	-	79713179	79717713	3pMXE	0.25	50	50	ENSMUST00000109627.8	ENSMUSG00000089715.13	Cbx6	chr15	protein_coding	chromobox 6
chr15	79678676	79717713	-	79713125	79717713	3pMXE	0.25	50	50	ENSMUST00000109625.8	ENSMUSG00000089715.13	Cbx6	chr15	protein_coding	chromobox 6
chr15	79713125	79717903	-	79713125;79717779	79717713;79717903	ES	0.33	50	50	ENSMUST00000109625.8	ENSMUSG00000089715.13	Cbx6	chr15	protein_coding	chromobox 6
chr15	79713179	79717903	-	79717779	79717903	A3SS&ES	0.33	50	50	ENSMUST00000109625.8	ENSMUSG00000089715.13	Cbx6	chr15	protein_coding	chromobox 6
chr15	79716958	79717713	-	79713125	79717713	A3SS	0.25	50	50	ENSMUST00000109625.8	ENSMUSG00000089715.13	Cbx6	chr15	protein_coding	chromobox 6
chr15	79713179	79717903	-	79713125	79717903	A3SS	0.33	50	50	ENSMUST00000141345.2	ENSMUSG00000089715.13	Cbx6	chr15	protein_coding	chromobox 6
chr15	79782426	79789645	+	79782426;79783319	79783221;79789645	ES	0.25	50	50	ENSMUST00000177350.8	ENSMUSG00000009585.19	Apobec3	chr15	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
chr15	79776023;79779759	79779612;79781896	+	79776023	79781896	cassetteExon	0.5	100	100	ENSMUST00000177350.8	ENSMUSG00000009585.19	Apobec3	chr15	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
chr15	79776770	79781896	+	79776023	79781896	A5SS	0.33	50	50	ENSMUST00000177350.8	ENSMUSG00000009585.19	Apobec3	chr15	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
chr15	79784600	79789645	+	79783319	79789645	A5SS	0.25	50	50	ENSMUST00000177350.8	ENSMUSG00000009585.19	Apobec3	chr15	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
chr15	79784770	79789645	+	79783319	79789645	A5SS	0.25	50	50	ENSMUST00000177350.8	ENSMUSG00000009585.19	Apobec3	chr15	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
chr15	79779759	79781945	+	79779759	79781896	A3SS	0.5	50	50	ENSMUST00000177483.8	ENSMUSG00000009585.19	Apobec3	chr15	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
chr15	79776640	79779612	+	79776023	79779612	A5SS	0.25	50	50	ENSMUST00000177483.8	ENSMUSG00000009585.19	Apobec3	chr15	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
chr15	79776770	79779612	+	79776023	79779612	A5SS	0.25	50	50	ENSMUST00000177483.8	ENSMUSG00000009585.19	Apobec3	chr15	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
chr15	79776770	79781896	+	79779759	79781896	A5SS&ES	0.33	50	50	ENSMUST00000177483.8	ENSMUSG00000009585.19	Apobec3	chr15	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
chr15	79779390	79779612	+	79776023	79779612	A5SS	0.25	50	50	ENSMUST00000177483.8	ENSMUSG00000009585.19	Apobec3	chr15	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
chr15	79784600	79789645	+	79782426	79789645	A5SS	0.25	50	50	ENSMUST00000177483.8	ENSMUSG00000009585.19	Apobec3	chr15	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
chr15	79784770	79789645	+	79782426	79789645	A5SS	0.25	50	50	ENSMUST00000177483.8	ENSMUSG00000009585.19	Apobec3	chr15	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
chr15	79776770	79779612	+	79776640	79779612	A5SS	0.25	50	50	ENSMUST00000176823.8	ENSMUSG00000009585.19	Apobec3	chr15	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
chr15	79779390	79779612	+	79776640	79779612	A5SS	0.25	50	50	ENSMUST00000176823.8	ENSMUSG00000009585.19	Apobec3	chr15	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
chr15	79776770	79781896	+	79776770;79779759	79779612;79781896	ES	0.5	50	50	ENSMUST00000175714.8	ENSMUSG00000009585.19	Apobec3	chr15	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
chr15	79791164	79795303	+	79791164	79791505	3pMXE	0.5	50	50	ENSMUST00000175714.8	ENSMUSG00000009585.19	Apobec3	chr15	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
chr15	79789801	79790581	+	79789801	79790542	A3SS	0.5	50	50	ENSMUST00000175714.8	ENSMUSG00000009585.19	Apobec3	chr15	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
chr15	79779390	79779612	+	79776770	79779612	A5SS	0.25	50	50	ENSMUST00000175714.8	ENSMUSG00000009585.19	Apobec3	chr15	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
chr15	79776770	79781896	+	79776770	79779612	A3SS&ES	0.5	50	50	ENSMUST00000176868.8	ENSMUSG00000009585.19	Apobec3	chr15	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
chr15	79776023	79781896	+	79779759	79781896	5pMXE	0.33	50	50	ENSMUST00000176904.2	ENSMUSG00000009585.19	Apobec3	chr15	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
chr15	79784600	79789645	+	79784600;79784770	79784704;79789645	ES	0.5	50	50	ENSMUST00000230135.2	ENSMUSG00000009585.19	Apobec3	chr15	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
chr15	79784600	79789645	+	79784770	79789645	A5SS	0.25	50	50	ENSMUST00000230741.2	ENSMUSG00000009585.19	Apobec3	chr15	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
chr15	79805639	79814787	-	79805639;79807738	79807673;79814787	ES	0.5	50	50	ENSMUST00000109616.9	ENSMUSG00000053411.17	Cbx7	chr15	protein_coding	chromobox 7
chr15	79814830	79817966	-	79814830	79816649	5pMXE	0.33	50	50	ENSMUST00000109616.9	ENSMUSG00000053411.17	Cbx7	chr15	protein_coding	chromobox 7
chr15	79814830	79855070	-	79814830	79816649	5pMXE	0.33	50	50	ENSMUST00000109616.9	ENSMUSG00000053411.17	Cbx7	chr15	protein_coding	chromobox 7
chr15	79803128	79805573	-	79803026	79805573	A3SS	0.33	50	50	ENSMUST00000109616.9	ENSMUSG00000053411.17	Cbx7	chr15	protein_coding	chromobox 7
chr15	79803305	79805573	-	79803026	79805573	A3SS	0.33	50	50	ENSMUST00000109616.9	ENSMUSG00000053411.17	Cbx7	chr15	protein_coding	chromobox 7
chr15	79803128	79805573	-	79803305	79805573	A3SS	0.33	50	50	ENSMUST00000089293.11	ENSMUSG00000053411.17	Cbx7	chr15	protein_coding	chromobox 7
chr15	79814830	79855070	-	79814830	79817966	5pMXE	0.33	50	50	ENSMUST00000146719.9	ENSMUSG00000053411.17	Cbx7	chr15	protein_coding	chromobox 7
chr15	79887615	79889674	-	79887615	79889670	A5SS	0.5	50	50	ENSMUST00000000500.8	ENSMUSG00000000489.8	Pdgfb	chr15	protein_coding	platelet derived growth factor, B polypeptide
chr15	79889766	79897291	-	79889766	79898137	A5SS	0.5	50	50	ENSMUST00000000500.8	ENSMUSG00000000489.8	Pdgfb	chr15	protein_coding	platelet derived growth factor, B polypeptide
chr15	79966783	79975752	-	79966783	79967525	5pMXE	0.5	50	50	ENSMUST00000081650.15	ENSMUSG00000060036.15	Rpl3	chr15	protein_coding	ribosomal protein L3
chr15	79962268	79963891	-	79963009	79963891	A3SS&ES	0.5	50	50	ENSMUST00000081650.15	ENSMUSG00000060036.15	Rpl3	chr15	protein_coding	ribosomal protein L3
chr15	79965412	79965816	-	79965232	79965816	A3SS	0.5	50	50	ENSMUST00000081650.15	ENSMUSG00000060036.15	Rpl3	chr15	protein_coding	ribosomal protein L3
chr15	79995945	80000056	+	79995945	79997367	3pMXE	0.5	50	50	ENSMUST00000009728.13	ENSMUSG00000022415.13	Syngr1	chr15	protein_coding	synaptogyrin 1
chr15	79982247	79994645	+	79975693	79994645	A5SS	0.5	50	50	ENSMUST00000009728.13	ENSMUSG00000022415.13	Syngr1	chr15	protein_coding	synaptogyrin 1
chr15	79999838	80000056	+	79995945	80000056	A5SS	0.5	50	50	ENSMUST00000009727.12	ENSMUSG00000022415.13	Syngr1	chr15	protein_coding	synaptogyrin 1
chr15	80017389	80032338	+	80017389	80032428	A3SS	0.5	50	50	ENSMUST00000230479.2	ENSMUSG00000022414.9	Tab1	chr15	protein_coding	TGF-beta activated kinase 1/MAP3K7 binding protein 1
chr15	80118382;80118981	80118883;80120006	+	80118382	80120006	cassetteExon	0.5	100	100	ENSMUST00000023048.12	ENSMUSG00000022412.15	Mief1	chr15	protein_coding	mitochondrial elongation factor 1
chr15	80120354;80123693	80123611;80130938	+	80120354	80130938	cassetteExon	0.5	100	100	ENSMUST00000023048.12	ENSMUSG00000022412.15	Mief1	chr15	protein_coding	mitochondrial elongation factor 1
chr15	80132252	80132528	+	80132252	80132442	A3SS	0.5	50	50	ENSMUST00000023048.12	ENSMUSG00000022412.15	Mief1	chr15	protein_coding	mitochondrial elongation factor 1
chr15	80118759	80120006	+	80118382	80120006	A5SS	0.33	50	50	ENSMUST00000023048.12	ENSMUSG00000022412.15	Mief1	chr15	protein_coding	mitochondrial elongation factor 1
chr15	80118382	80118883	+	80118364	80118883	A5SS	0.33	50	50	ENSMUST00000230654.2	ENSMUSG00000022412.15	Mief1	chr15	protein_coding	mitochondrial elongation factor 1
chr15	80118382	80120006	+	80118981	80120006	A5SS&ES	0.33	50	50	ENSMUST00000230654.2	ENSMUSG00000022412.15	Mief1	chr15	protein_coding	mitochondrial elongation factor 1
chr15	80118759	80118883	+	80118364	80118883	A5SS	0.33	50	50	ENSMUST00000230654.2	ENSMUSG00000022412.15	Mief1	chr15	protein_coding	mitochondrial elongation factor 1
chr15	80118759	80120006	+	80118981	80120006	A5SS&ES	0.33	50	50	ENSMUST00000230654.2	ENSMUSG00000022412.15	Mief1	chr15	protein_coding	mitochondrial elongation factor 1
chr15	80118759	80118883	+	80118382	80118883	A5SS	0.33	50	50	ENSMUST00000229138.2	ENSMUSG00000022412.15	Mief1	chr15	protein_coding	mitochondrial elongation factor 1
chr15	80118759	80120006	+	80118759	80118883	3pMXE	0.5	50	50	ENSMUST00000229612.2	ENSMUSG00000022412.15	Mief1	chr15	protein_coding	mitochondrial elongation factor 1
chr15	80118759;80118981	80118883;80120006	+	80118759	80120006	cassetteExon	0.5	100	100	ENSMUST00000166030.2	ENSMUSG00000022412.15	Mief1	chr15	protein_coding	mitochondrial elongation factor 1
chr15	80145595;80148028	80147893;80148184	-	80145595	80148184	cassetteExon	0.5	100	100	ENSMUST00000052499.9	ENSMUSG00000051518.9	Rps19bp1	chr15	protein_coding	ribosomal protein S19 binding protein 1
chr15	80273640	80273942	+	80273640	80273903	A3SS	0.5	50	50	ENSMUST00000160424.8	ENSMUSG00000022416.16	Cacna1i	chr15	protein_coding	calcium channel, voltage-dependent, alpha 1I subunit
chr15	80274049	80274945	+	80274049	80275026	A3SS	0.33	50	50	ENSMUST00000160424.8	ENSMUSG00000022416.16	Cacna1i	chr15	protein_coding	calcium channel, voltage-dependent, alpha 1I subunit
chr15	80274049	80275066	+	80274049	80275026	A3SS	0.33	50	50	ENSMUST00000160424.8	ENSMUSG00000022416.16	Cacna1i	chr15	protein_coding	calcium channel, voltage-dependent, alpha 1I subunit
chr15	80274049	80274945	+	80274049	80275066	A3SS	0.33	50	50	ENSMUST00000162155.8	ENSMUSG00000022416.16	Cacna1i	chr15	protein_coding	calcium channel, voltage-dependent, alpha 1I subunit
chr15	80320478	80322630	-	80320299	80322630	A3SS	0.5	50	50	ENSMUST00000230208.2	ENSMUSG00000115888.2	Gm31369	chr15	lncRNA	predicted gene, 31369
chr15	80508015;80508249	80508156;80518537	+	80508015	80518537	cassetteExon	0.5	100	100	ENSMUST00000229980.2	ENSMUSG00000042351.10	Grap2	chr15	protein_coding	GRB2-related adaptor protein 2
chr15	80508015	80514937	+	80508015	80518537	A3SS	0.33	50	50	ENSMUST00000229980.2	ENSMUSG00000042351.10	Grap2	chr15	protein_coding	GRB2-related adaptor protein 2
chr15	80508015	80518537	+	80508249	80518537	A5SS	0.5	50	50	ENSMUST00000230856.2	ENSMUSG00000042351.10	Grap2	chr15	protein_coding	GRB2-related adaptor protein 2
chr15	80508015	80514937	+	80508015	80508156	A3SS&ES	0.33	50	50	ENSMUST00000230573.2	ENSMUSG00000042351.10	Grap2	chr15	protein_coding	GRB2-related adaptor protein 2
chr15	80579137	80580671	-	80579137	80580845	A5SS	0.5	50	50	ENSMUST00000230612.2	ENSMUSG00000116220.2	A430088P11Rik	chr15	lncRNA	RIKEN cDNA A430088P11 gene
chr15	80765407	80768408	+	80765407;80767303	80767145;80768408	ES	0.5	50	50	ENSMUST00000067689.9	ENSMUSG00000047888.11	Tnrc6b	chr15	protein_coding	trinucleotide repeat containing 6b
chr15	80773356;80774477	80774307;80778530	+	80773356	80778530	cassetteExon	0.5	100	100	ENSMUST00000067689.9	ENSMUSG00000047888.11	Tnrc6b	chr15	protein_coding	trinucleotide repeat containing 6b
chr15	80683005	80742882	+	80669007	80742882	A5SS	0.5	50	50	ENSMUST00000067689.9	ENSMUSG00000047888.11	Tnrc6b	chr15	protein_coding	trinucleotide repeat containing 6b
chr15	80836601	80840414	+	80836601;80839865	80839821;80840414	ES	0.5	50	50	ENSMUST00000023043.10	ENSMUSG00000022407.11	Adsl	chr15	protein_coding	adenylosuccinate lyase
chr15	80839865	80844596	+	80839865;80840493	80840414;80844596	ES	0.33	50	50	ENSMUST00000023043.10	ENSMUSG00000022407.11	Adsl	chr15	protein_coding	adenylosuccinate lyase
chr15	80844767	80846897	+	80844767;80845603	80845557;80846897	ES	0.5	50	50	ENSMUST00000023043.10	ENSMUSG00000022407.11	Adsl	chr15	protein_coding	adenylosuccinate lyase
chr15	80848228	80851313	+	80848228;80850383	80850293;80851313	ES	0.5	50	50	ENSMUST00000023043.10	ENSMUSG00000022407.11	Adsl	chr15	protein_coding	adenylosuccinate lyase
chr15	80851402	80852863	+	80851402;80851966	80851790;80852863	ES	0.5	50	50	ENSMUST00000023043.10	ENSMUSG00000022407.11	Adsl	chr15	protein_coding	adenylosuccinate lyase
chr15	80832846	80839821	+	80836601	80839821	A5SS&ES	0.5	50	50	ENSMUST00000023043.10	ENSMUSG00000022407.11	Adsl	chr15	protein_coding	adenylosuccinate lyase
chr15	80833137	80836398	+	80832901	80836398	A5SS	0.5	50	50	ENSMUST00000023043.10	ENSMUSG00000022407.11	Adsl	chr15	protein_coding	adenylosuccinate lyase
chr15	80836601	80844596	+	80836601;80839865	80839821;80844596	ES	0.33	50	50	ENSMUST00000166711.8	ENSMUSG00000022407.11	Adsl	chr15	protein_coding	adenylosuccinate lyase
chr15	80836601;80840493	80840414;80844596	+	80836601;80839865	80839821;80844596	MXE	0.5	100	100	ENSMUST00000166711.8	ENSMUSG00000022407.11	Adsl	chr15	protein_coding	adenylosuccinate lyase
chr15	80836601	80840414	+	80839865	80840414	A5SS&ES	0.5	50	50	ENSMUST00000207170.2	ENSMUSG00000022407.11	Adsl	chr15	protein_coding	adenylosuccinate lyase
chr15	80836601	80844596	+	80840493	80844596	A5SS&ES	0.33	50	50	ENSMUST00000207170.2	ENSMUSG00000022407.11	Adsl	chr15	protein_coding	adenylosuccinate lyase
chr15	80836601;80840493	80840414;80844596	+	80836601	80844596	cassetteExon	0.5	100	100	ENSMUST00000200201.5	ENSMUSG00000022407.11	Adsl	chr15	protein_coding	adenylosuccinate lyase
chr15	80848228	80851313	+	80848228	80850293	3pMXE	0.5	50	50	ENSMUST00000169238.8	ENSMUSG00000022407.11	Adsl	chr15	protein_coding	adenylosuccinate lyase
chr15	80836601	80840414	+	80836601	80839821	3pMXE	0.33	50	50	ENSMUST00000164371.2	ENSMUSG00000022407.11	Adsl	chr15	protein_coding	adenylosuccinate lyase
chr15	80836601	80844596	+	80836601	80839821	3pMXE	0.33	50	50	ENSMUST00000164371.2	ENSMUSG00000022407.11	Adsl	chr15	protein_coding	adenylosuccinate lyase
chr15	80844767	80846897	+	80845603	80846897	5pMXE	0.5	50	50	ENSMUST00000163575.2	ENSMUSG00000022407.11	Adsl	chr15	protein_coding	adenylosuccinate lyase
chr15	80892635	80893425	+	80892635;80893109	80892885;80893425	ES	0.5	50	50	ENSMUST00000139517.9	ENSMUSG00000042303.20	Sgsm3	chr15	protein_coding	small G protein signaling modulator 3
chr15	80862066;80881054	80881014;80886770	+	80862066	80886770	cassetteExon	0.5	100	100	ENSMUST00000139517.9	ENSMUSG00000042303.20	Sgsm3	chr15	protein_coding	small G protein signaling modulator 3
chr15	80888071	80888264	+	80888071	80890608	A3SS	0.5	50	50	ENSMUST00000139517.9	ENSMUSG00000042303.20	Sgsm3	chr15	protein_coding	small G protein signaling modulator 3
chr15	80894479	80894689	+	80894479	80894611	A3SS	0.5	50	50	ENSMUST00000139517.9	ENSMUSG00000042303.20	Sgsm3	chr15	protein_coding	small G protein signaling modulator 3
chr15	80895723	80895860	+	80895723	80895857	A3SS	0.5	50	50	ENSMUST00000139517.9	ENSMUSG00000042303.20	Sgsm3	chr15	protein_coding	small G protein signaling modulator 3
chr15	80862143	80886770	+	80862066	80886770	A5SS	0.25	50	50	ENSMUST00000139517.9	ENSMUSG00000042303.20	Sgsm3	chr15	protein_coding	small G protein signaling modulator 3
chr15	80862324	80886770	+	80862066	80886770	A5SS	0.25	50	50	ENSMUST00000139517.9	ENSMUSG00000042303.20	Sgsm3	chr15	protein_coding	small G protein signaling modulator 3
chr15	80887719	80888005	+	80887646	80888005	A5SS	0.5	50	50	ENSMUST00000139517.9	ENSMUSG00000042303.20	Sgsm3	chr15	protein_coding	small G protein signaling modulator 3
chr15	80862143	80886770	+	80881054	80886770	A5SS&ES	0.25	50	50	ENSMUST00000137255.3	ENSMUSG00000042303.20	Sgsm3	chr15	protein_coding	small G protein signaling modulator 3
chr15	80862324	80886770	+	80881054	80886770	A5SS&ES	0.25	50	50	ENSMUST00000137255.3	ENSMUSG00000042303.20	Sgsm3	chr15	protein_coding	small G protein signaling modulator 3
chr15	80862324	80886770	+	80862143	80886770	A5SS	0.25	50	50	ENSMUST00000229727.2	ENSMUSG00000042303.20	Sgsm3	chr15	protein_coding	small G protein signaling modulator 3
chr15	80892635	80893425	+	80893109	80893425	A5SS	0.5	50	50	ENSMUST00000138550.8	ENSMUSG00000042303.20	Sgsm3	chr15	protein_coding	small G protein signaling modulator 3
chr15	80902680	80904954	-	80902680;80904515	80904366;80904954	ES	0.5	50	50	ENSMUST00000134469.9	ENSMUSG00000042292.19	Mrtfa	chr15	protein_coding	myocardin related transcription factor A
chr15	81001853	81074708	-	81001853;81040994	81040945;81074708	ES	0.5	50	50	ENSMUST00000134469.9	ENSMUSG00000042292.19	Mrtfa	chr15	protein_coding	myocardin related transcription factor A
chr15	80929555	80950907	-	80929555	81001592	A5SS	0.33	50	50	ENSMUST00000134469.9	ENSMUSG00000042292.19	Mrtfa	chr15	protein_coding	myocardin related transcription factor A
chr15	80929555	80988974	-	80929555	81001592	A5SS	0.33	50	50	ENSMUST00000134469.9	ENSMUSG00000042292.19	Mrtfa	chr15	protein_coding	myocardin related transcription factor A
chr15	80929555	80950907	-	80929555	80988974	A5SS	0.33	50	50	ENSMUST00000109579.9	ENSMUSG00000042292.19	Mrtfa	chr15	protein_coding	myocardin related transcription factor A
chr15	80902680	80904954	-	80904515	80904954	3pMXE	0.5	50	50	ENSMUST00000145779.2	ENSMUSG00000042292.19	Mrtfa	chr15	protein_coding	myocardin related transcription factor A
chr15	81134382	81135901	-	81127620	81135901	A3SS	0.5	50	50	ENSMUST00000230860.2	ENSMUSG00000115970.2	8430426J06Rik	chr15	lncRNA	RIKEN cDNA 8430426J06 gene
chr15	81127620	81131877	-	81127620	81135901	A5SS	0.33	50	50	ENSMUST00000230860.2	ENSMUSG00000115970.2	8430426J06Rik	chr15	lncRNA	RIKEN cDNA 8430426J06 gene
chr15	81127620	81132116	-	81127620	81135901	A5SS	0.33	50	50	ENSMUST00000230860.2	ENSMUSG00000115970.2	8430426J06Rik	chr15	lncRNA	RIKEN cDNA 8430426J06 gene
chr15	81127620	81131877	-	81127620	81132116	A5SS	0.33	50	50	ENSMUST00000229383.2	ENSMUSG00000115970.2	8430426J06Rik	chr15	lncRNA	RIKEN cDNA 8430426J06 gene
chr15	81211337	81213251	-	81211337;81211563	81211418;81213251	ES	0.5	50	50	ENSMUST00000023040.9	ENSMUSG00000022404.9	Slc25a17	chr15	protein_coding	solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17
chr15	81224241;81227593	81227507;81228302	-	81224241	81228302	cassetteExon	0.5	100	100	ENSMUST00000023040.9	ENSMUSG00000022404.9	Slc25a17	chr15	protein_coding	solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17
chr15	81228362;81229167	81229107;81244878	-	81228362	81244878	cassetteExon	0.5	100	100	ENSMUST00000023040.9	ENSMUSG00000022404.9	Slc25a17	chr15	protein_coding	solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17
chr15	81207893	81209094	-	81207893	81211242	A5SS	0.5	50	50	ENSMUST00000023040.9	ENSMUSG00000022404.9	Slc25a17	chr15	protein_coding	solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17
chr15	81273897	81276466	-	81273924	81276466	A3SS	0.5	50	50	ENSMUST00000172107.8	ENSMUSG00000022403.16	St13	chr15	protein_coding	suppression of tumorigenicity 13
chr15	81276523	81283508	-	81276523	81283686	A5SS	0.33	50	50	ENSMUST00000172107.8	ENSMUSG00000022403.16	St13	chr15	protein_coding	suppression of tumorigenicity 13
chr15	81276523	81283990	-	81276523	81283686	A5SS	0.33	50	50	ENSMUST00000172107.8	ENSMUSG00000022403.16	St13	chr15	protein_coding	suppression of tumorigenicity 13
chr15	81276523	81283990	-	81276523	81283508	5pMXE	0.33	50	50	ENSMUST00000165582.2	ENSMUSG00000022403.16	St13	chr15	protein_coding	suppression of tumorigenicity 13
chr15	81276523	81283990	-	81276523;81283888	81283686;81283990	ES	0.5	50	50	ENSMUST00000163382.2	ENSMUSG00000022403.16	St13	chr15	protein_coding	suppression of tumorigenicity 13
chr15	81276523;81283888	81283508;81283990	-	81276523	81283990	cassetteExon	0.5	100	100	ENSMUST00000169204.2	ENSMUSG00000022403.16	St13	chr15	protein_coding	suppression of tumorigenicity 13
chr15	81311884	81320915	+	81311884;81315093	81314891;81320915	ES	0.5	50	50	ENSMUST00000163754.9	ENSMUSG00000022401.13	Xpnpep3	chr15	protein_coding	X-prolyl aminopeptidase 3, mitochondrial
chr15	81326665	81335102	+	81326665;81332697	81332520;81335102	ES	0.5	50	50	ENSMUST00000163754.9	ENSMUSG00000022401.13	Xpnpep3	chr15	protein_coding	X-prolyl aminopeptidase 3, mitochondrial
chr15	81298749;81300195	81300048;81311477	+	81298749	81311477	cassetteExon	0.5	100	100	ENSMUST00000163754.9	ENSMUSG00000022401.13	Xpnpep3	chr15	protein_coding	X-prolyl aminopeptidase 3, mitochondrial
chr15	81298749;81300195	81300104;81311477	+	81298749	81311477	cassetteExon	0.5	100	100	ENSMUST00000163754.9	ENSMUSG00000022401.13	Xpnpep3	chr15	protein_coding	X-prolyl aminopeptidase 3, mitochondrial
chr15	81298749	81300104	+	81298749	81300048	A3SS	0.33	50	50	ENSMUST00000164144.3	ENSMUSG00000022401.13	Xpnpep3	chr15	protein_coding	X-prolyl aminopeptidase 3, mitochondrial
chr15	81298749	81311477	+	81298749	81300048	3pMXE	0.33	50	50	ENSMUST00000166831.9	ENSMUSG00000022401.13	Xpnpep3	chr15	protein_coding	X-prolyl aminopeptidase 3, mitochondrial
chr15	81350955	81352356	+	81350651	81352356	A5SS	0.33	50	50	ENSMUST00000023036.7	ENSMUSG00000022400.10	Rbx1	chr15	protein_coding	ring-box 1
chr15	81351150	81352356	+	81350651	81352356	A5SS	0.33	50	50	ENSMUST00000023036.7	ENSMUSG00000022400.10	Rbx1	chr15	protein_coding	ring-box 1
chr15	81351150	81352356	+	81350955	81352356	A5SS	0.33	50	50	ENSMUST00000230062.2	ENSMUSG00000022400.10	Rbx1	chr15	protein_coding	ring-box 1
chr15	81500326	81504201	+	81500326;81501064	81500927;81504201	ES	0.5	50	50	ENSMUST00000068387.11	ENSMUSG00000055024.13	Ep300	chr15	protein_coding	E1A binding protein p300
chr15	81505437	81508726	+	81505437;81507726	81507649;81508726	ES	0.5	50	50	ENSMUST00000068387.11	ENSMUSG00000055024.13	Ep300	chr15	protein_coding	E1A binding protein p300
chr15	81505437	81508726	+	81505437	81507649	3pMXE	0.5	50	50	ENSMUST00000189338.2	ENSMUSG00000055024.13	Ep300	chr15	protein_coding	E1A binding protein p300
chr15	81555348	81560459	+	81555348;81559833	81559716;81560459	ES	0.5	50	50	ENSMUST00000023029.15	ENSMUSG00000022394.15	L3mbtl2	chr15	protein_coding	L3MBTL2 polycomb repressive complex 1 subunit
chr15	81570522	81571193	+	81570522	81571141	A3SS	0.5	50	50	ENSMUST00000023029.15	ENSMUSG00000022394.15	L3mbtl2	chr15	protein_coding	L3MBTL2 polycomb repressive complex 1 subunit
chr15	81553080	81554328	+	81552964	81554328	A5SS	0.5	50	50	ENSMUST00000023029.15	ENSMUSG00000022394.15	L3mbtl2	chr15	protein_coding	L3MBTL2 polycomb repressive complex 1 subunit
chr15	81566675	81566772	+	81566352	81566772	A5SS	0.5	50	50	ENSMUST00000023029.15	ENSMUSG00000022394.15	L3mbtl2	chr15	protein_coding	L3MBTL2 polycomb repressive complex 1 subunit
chr15	81555348	81560459	+	81555348	81559716	3pMXE	0.5	50	50	ENSMUST00000173607.2	ENSMUSG00000022394.15	L3mbtl2	chr15	protein_coding	L3MBTL2 polycomb repressive complex 1 subunit
chr15	81555348	81560459	+	81559833	81560459	5pMXE	0.5	50	50	ENSMUST00000174497.2	ENSMUSG00000022394.15	L3mbtl2	chr15	protein_coding	L3MBTL2 polycomb repressive complex 1 subunit
chr15	81576507	81577735	-	81576507;81577354	81577188;81577735	ES	0.5	50	50	ENSMUST00000173598.8	ENSMUSG00000063765.13	Chadl	chr15	protein_coding	chondroadherin-like
chr15	81570603	81576309	-	81568153	81576309	A3SS	0.5	50	50	ENSMUST00000173598.8	ENSMUSG00000063765.13	Chadl	chr15	protein_coding	chondroadherin-like
chr15	81608833	81613913	-	81608833;81613465	81613418;81613913	ES	0.33	50	50	ENSMUST00000170134.9	ENSMUSG00000022391.17	Rangap1	chr15	protein_coding	RAN GTPase activating protein 1
chr15	81608833;81610483	81610275;81613913	-	81608833;81613465	81613418;81613913	MXE	0.5	100	100	ENSMUST00000170134.9	ENSMUSG00000022391.17	Rangap1	chr15	protein_coding	RAN GTPase activating protein 1
chr15	81608833;81610483	81610275;81613913	-	81608833	81613913	cassetteExon	0.5	100	100	ENSMUST00000052374.13	ENSMUSG00000022391.17	Rangap1	chr15	protein_coding	RAN GTPase activating protein 1
chr15	81608833	81613913	-	81608833	81613418	5pMXE	0.33	50	50	ENSMUST00000230302.2	ENSMUSG00000022391.17	Rangap1	chr15	protein_coding	RAN GTPase activating protein 1
chr15	81608833	81610275	-	81608833	81613418	A5SS	0.33	50	50	ENSMUST00000230302.2	ENSMUSG00000022391.17	Rangap1	chr15	protein_coding	RAN GTPase activating protein 1
chr15	81653067	81653200	+	81653067	81653185	A3SS	0.5	50	50	ENSMUST00000229044.2	ENSMUSG00000022390.12	Zc3h7b	chr15	protein_coding	zinc finger CCCH type containing 7B
chr15	81662910	81663000	+	81662910	81663310	A3SS	0.5	50	50	ENSMUST00000229044.2	ENSMUSG00000022390.12	Zc3h7b	chr15	protein_coding	zinc finger CCCH type containing 7B
chr15	81687087	81689221	+	81687087	81699145	A3SS	0.25	50	50	ENSMUST00000109553.10	ENSMUSG00000022389.16	Tef	chr15	protein_coding	thyrotroph embryonic factor
chr15	81687087	81689733	+	81687087	81699145	A3SS	0.25	50	50	ENSMUST00000109553.10	ENSMUSG00000022389.16	Tef	chr15	protein_coding	thyrotroph embryonic factor
chr15	81687087	81689791	+	81687087	81699145	A3SS	0.25	50	50	ENSMUST00000109553.10	ENSMUSG00000022389.16	Tef	chr15	protein_coding	thyrotroph embryonic factor
chr15	81695347	81699145	+	81687087	81699145	A5SS	0.25	50	50	ENSMUST00000109553.10	ENSMUSG00000022389.16	Tef	chr15	protein_coding	thyrotroph embryonic factor
chr15	81695921	81699145	+	81687087	81699145	A5SS	0.25	50	50	ENSMUST00000109553.10	ENSMUSG00000022389.16	Tef	chr15	protein_coding	thyrotroph embryonic factor
chr15	81696492	81699145	+	81687087	81699145	A5SS	0.25	50	50	ENSMUST00000109553.10	ENSMUSG00000022389.16	Tef	chr15	protein_coding	thyrotroph embryonic factor
chr15	81704856	81705400	+	81699462	81705400	A5SS	0.5	50	50	ENSMUST00000109553.10	ENSMUSG00000022389.16	Tef	chr15	protein_coding	thyrotroph embryonic factor
chr15	81687087	81689221	+	81687087	81689791	A3SS	0.25	50	50	ENSMUST00000166302.2	ENSMUSG00000022389.16	Tef	chr15	protein_coding	thyrotroph embryonic factor
chr15	81687087	81689733	+	81687087	81689791	A3SS	0.25	50	50	ENSMUST00000166302.2	ENSMUSG00000022389.16	Tef	chr15	protein_coding	thyrotroph embryonic factor
chr15	81687087	81689733	+	81687087	81689221	3pMXE	0.25	50	50	ENSMUST00000170027.2	ENSMUSG00000022389.16	Tef	chr15	protein_coding	thyrotroph embryonic factor
chr15	81695921	81699145	+	81695347	81699145	A5SS	0.25	50	50	ENSMUST00000168200.2	ENSMUSG00000022389.16	Tef	chr15	protein_coding	thyrotroph embryonic factor
chr15	81696492	81699145	+	81695347	81699145	A5SS	0.25	50	50	ENSMUST00000168200.2	ENSMUSG00000022389.16	Tef	chr15	protein_coding	thyrotroph embryonic factor
chr15	81696492	81699145	+	81695921	81699145	A5SS	0.25	50	50	ENSMUST00000023024.8	ENSMUSG00000022389.16	Tef	chr15	protein_coding	thyrotroph embryonic factor
chr15	81742461	81742724	-	81742461	81742674	A5SS&ES	0.5	50	50	ENSMUST00000231000.2	ENSMUSG00000048546.9	Tob2	chr15	protein_coding	transducer of ERBB2, 2
chr15	81750093	81751369	-	81750093	81754533	A5SS	0.5	50	50	ENSMUST00000023117.10	ENSMUSG00000061360.9	Phf5a	chr15	protein_coding	PHD finger protein 5A
chr15	81755390	81755794	-	81755390	81756014	A5SS	0.5	50	50	ENSMUST00000023117.10	ENSMUSG00000061360.9	Phf5a	chr15	protein_coding	PHD finger protein 5A
chr15	81757079	81773499	+	81756749	81773499	A5SS	0.5	50	50	ENSMUST00000023116.7	ENSMUSG00000022477.14	Aco2	chr15	protein_coding	aconitase 2, mitochondrial
chr15	81756749	81783330	+	81756749	81773499	3pMXE	0.5	50	50	ENSMUST00000135198.2	ENSMUSG00000022477.14	Aco2	chr15	protein_coding	aconitase 2, mitochondrial
chr15	81779629	81783330	+	81756749	81783330	A5SS	0.5	50	50	ENSMUST00000229068.2	ENSMUSG00000022477.14	Aco2	chr15	protein_coding	aconitase 2, mitochondrial
chr15	81802532	81806610	-	81802532;81802962	81802876;81806610	ES	0.5	50	50	ENSMUST00000230669.2	ENSMUSG00000022476.9	Polr3h	chr15	protein_coding	polymerase (RNA) III (DNA directed) polypeptide H
chr15	81773600	81798987	-	81773600	81800519	A5SS	0.5	50	50	ENSMUST00000230669.2	ENSMUSG00000022476.9	Polr3h	chr15	protein_coding	polymerase (RNA) III (DNA directed) polypeptide H
chr15	81806706	81809429	-	81806706	81809306	A5SS	0.25	50	50	ENSMUST00000230669.2	ENSMUSG00000022476.9	Polr3h	chr15	protein_coding	polymerase (RNA) III (DNA directed) polypeptide H
chr15	81806706	81809444	-	81806706	81809306	A5SS	0.25	50	50	ENSMUST00000230669.2	ENSMUSG00000022476.9	Polr3h	chr15	protein_coding	polymerase (RNA) III (DNA directed) polypeptide H
chr15	81806706	81809987	-	81806706	81809306	A5SS	0.25	50	50	ENSMUST00000230669.2	ENSMUSG00000022476.9	Polr3h	chr15	protein_coding	polymerase (RNA) III (DNA directed) polypeptide H
chr15	81806706	81809429	-	81806706	81809987	A5SS	0.25	50	50	ENSMUST00000023113.7	ENSMUSG00000022476.9	Polr3h	chr15	protein_coding	polymerase (RNA) III (DNA directed) polypeptide H
chr15	81806706	81809444	-	81806706	81809987	A5SS	0.25	50	50	ENSMUST00000023113.7	ENSMUSG00000022476.9	Polr3h	chr15	protein_coding	polymerase (RNA) III (DNA directed) polypeptide H
chr15	81806706	81809444	-	81806706	81809429	A5SS	0.25	50	50	ENSMUST00000230765.2	ENSMUSG00000022476.9	Polr3h	chr15	protein_coding	polymerase (RNA) III (DNA directed) polypeptide H
chr15	81821514	81830832	+	81821188	81830832	A5SS	0.33	50	50	ENSMUST00000038757.8	ENSMUSG00000042109.9	Csdc2	chr15	protein_coding	cold shock domain containing C2, RNA binding
chr15	81830125	81830832	+	81821188	81830832	A5SS	0.33	50	50	ENSMUST00000038757.8	ENSMUSG00000042109.9	Csdc2	chr15	protein_coding	cold shock domain containing C2, RNA binding
chr15	81830125	81830832	+	81821514	81830832	A5SS	0.33	50	50	ENSMUST00000135663.2	ENSMUSG00000042109.9	Csdc2	chr15	protein_coding	cold shock domain containing C2, RNA binding
chr15	81837001	81839850	-	81837001;81838651	81838573;81839850	ES	0.33	50	50	ENSMUST00000229385.2	ENSMUSG00000022474.16	Pmm1	chr15	protein_coding	phosphomannomutase 1
chr15	81836208	81836926	-	81836240	81836926	A3SS	0.33	50	50	ENSMUST00000229385.2	ENSMUSG00000022474.16	Pmm1	chr15	protein_coding	phosphomannomutase 1
chr15	81836269	81836926	-	81836240	81836926	A3SS	0.33	50	50	ENSMUST00000229385.2	ENSMUSG00000022474.16	Pmm1	chr15	protein_coding	phosphomannomutase 1
chr15	81838633	81839850	-	81838651	81839850	A3SS	0.33	50	50	ENSMUST00000229385.2	ENSMUSG00000022474.16	Pmm1	chr15	protein_coding	phosphomannomutase 1
chr15	81840461	81842097	-	81840461	81840563	A5SS&ES	0.5	50	50	ENSMUST00000229385.2	ENSMUSG00000022474.16	Pmm1	chr15	protein_coding	phosphomannomutase 1
chr15	81837001;81838633	81838573;81839850	-	81837001	81839850	cassetteExon	0.5	100	100	ENSMUST00000071462.7	ENSMUSG00000022474.16	Pmm1	chr15	protein_coding	phosphomannomutase 1
chr15	81836269	81836926	-	81836208	81836926	A3SS	0.33	50	50	ENSMUST00000147645.3	ENSMUSG00000022474.16	Pmm1	chr15	protein_coding	phosphomannomutase 1
chr15	81901399	81906646	+	81901399;81903294	81903182;81906646	ES	0.5	50	50	ENSMUST00000165777.8	ENSMUSG00000022471.15	Xrcc6	chr15	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 6
chr15	81899780	81900083	+	81899780	81901311	A3SS	0.5	50	50	ENSMUST00000165777.8	ENSMUSG00000022471.15	Xrcc6	chr15	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 6
chr15	81900676	81901311	+	81899780	81901311	A5SS	0.33	50	50	ENSMUST00000165777.8	ENSMUSG00000022471.15	Xrcc6	chr15	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 6
chr15	81900859	81901311	+	81899780	81901311	A5SS	0.33	50	50	ENSMUST00000165777.8	ENSMUSG00000022471.15	Xrcc6	chr15	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 6
chr15	81913925	81919878	+	81913925;81915463	81915334;81919878	ES	0.33	50	50	ENSMUST00000100399.11	ENSMUSG00000022471.15	Xrcc6	chr15	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 6
chr15	81907262	81909770	+	81907262	81909706	A3SS	0.5	50	50	ENSMUST00000100399.11	ENSMUSG00000022471.15	Xrcc6	chr15	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 6
chr15	81912355	81913323	+	81911612	81913323	A5SS	0.5	50	50	ENSMUST00000100399.11	ENSMUSG00000022471.15	Xrcc6	chr15	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 6
chr15	81912355	81919878	+	81915463	81919878	A5SS&ES	0.33	50	50	ENSMUST00000100399.11	ENSMUSG00000022471.15	Xrcc6	chr15	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 6
chr15	81900859	81901311	+	81900676	81901311	A5SS	0.33	50	50	ENSMUST00000069530.13	ENSMUSG00000022471.15	Xrcc6	chr15	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 6
chr15	81912355	81913323	+	81912355	81919878	A3SS	0.5	50	50	ENSMUST00000164920.8	ENSMUSG00000022471.15	Xrcc6	chr15	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 6
chr15	81913925	81919878	+	81912355	81919878	A5SS	0.33	50	50	ENSMUST00000164920.8	ENSMUSG00000022471.15	Xrcc6	chr15	protein_coding	X-ray repair complementing defective repair in Chinese hamster cells 6
chr15	81883815	81900079	-	81883815;81887980	81887959;81900079	ES	0.33	50	50	ENSMUST00000146628.8	ENSMUSG00000022472.17	Desi1	chr15	protein_coding	desumoylating isopeptidase 1
chr15	81887980	81914863	-	81887980	81900079	5pMXE	0.33	50	50	ENSMUST00000146628.8	ENSMUSG00000022472.17	Desi1	chr15	protein_coding	desumoylating isopeptidase 1
chr15	81882433;81883613	81883431;81883706	-	81882433	81883706	cassetteExon	0.5	100	100	ENSMUST00000146628.8	ENSMUSG00000022472.17	Desi1	chr15	protein_coding	desumoylating isopeptidase 1
chr15	81883815;81886811	81886742;81887959	-	81883815	81887959	cassetteExon	0.5	100	100	ENSMUST00000146628.8	ENSMUSG00000022472.17	Desi1	chr15	protein_coding	desumoylating isopeptidase 1
chr15	81887980;81891350	81891317;81900079	-	81887980	81900079	cassetteExon	0.5	100	100	ENSMUST00000146628.8	ENSMUSG00000022472.17	Desi1	chr15	protein_coding	desumoylating isopeptidase 1
chr15	81882500	81883706	-	81882433	81883706	A3SS	0.33	50	50	ENSMUST00000146628.8	ENSMUSG00000022472.17	Desi1	chr15	protein_coding	desumoylating isopeptidase 1
chr15	81882500	81883706	-	81883613	81883706	A3SS&ES	0.33	50	50	ENSMUST00000135988.8	ENSMUSG00000022472.17	Desi1	chr15	protein_coding	desumoylating isopeptidase 1
chr15	81883815	81900079	-	81883815	81886742	A5SS&ES	0.33	50	50	ENSMUST00000129039.8	ENSMUSG00000022472.17	Desi1	chr15	protein_coding	desumoylating isopeptidase 1
chr15	81887980	81891317	-	81887980	81914863	A5SS	0.33	50	50	ENSMUST00000129039.8	ENSMUSG00000022472.17	Desi1	chr15	protein_coding	desumoylating isopeptidase 1
chr15	81891350	81900079	-	81883815	81900079	A3SS	0.33	50	50	ENSMUST00000089187.7	ENSMUSG00000022472.17	Desi1	chr15	protein_coding	desumoylating isopeptidase 1
chr15	81926398	81931688	-	81928218	81931688	A3SS&ES	0.5	50	50	ENSMUST00000080622.9	ENSMUSG00000063480.9	Snu13	chr15	protein_coding	SNU13 homolog, small nuclear ribonucleoprotein (U4/U6.U5)
chr15	81980131	81985149	+	81980131;81982299	81982202;81985149	ES	0.5	50	50	ENSMUST00000229119.2	ENSMUSG00000068117.11	Mei1	chr15	protein_coding	meiotic double-stranded break formation protein 1
chr15	81991396	81993740	+	81991396	81993722	A3SS	0.5	50	50	ENSMUST00000229119.2	ENSMUSG00000068117.11	Mei1	chr15	protein_coding	meiotic double-stranded break formation protein 1
chr15	81966763	81967275	+	81966228	81967275	A5SS	0.5	50	50	ENSMUST00000229119.2	ENSMUSG00000068117.11	Mei1	chr15	protein_coding	meiotic double-stranded break formation protein 1
chr15	82015746	82018782	+	82015746;82016030	82015946;82018782	ES	0.33	50	50	ENSMUST00000089174.6	ENSMUSG00000068114.8	Ccdc134	chr15	protein_coding	coiled-coil domain containing 134
chr15	82014371;82017567	82017484;82018782	+	82014371;82016030	82015625;82018782	MXE	0.5	100	100	ENSMUST00000089174.6	ENSMUSG00000068114.8	Ccdc134	chr15	protein_coding	coiled-coil domain containing 134
chr15	82014371	82015617	+	82014371	82015625	A3SS	0.33	50	50	ENSMUST00000089174.6	ENSMUSG00000068114.8	Ccdc134	chr15	protein_coding	coiled-coil domain containing 134
chr15	82015746	82015918	+	82015746	82015946	A3SS	0.33	50	50	ENSMUST00000089174.6	ENSMUSG00000068114.8	Ccdc134	chr15	protein_coding	coiled-coil domain containing 134
chr15	82014371	82017484	+	82014371	82015617	3pMXE	0.33	50	50	ENSMUST00000229788.2	ENSMUSG00000068114.8	Ccdc134	chr15	protein_coding	coiled-coil domain containing 134
chr15	82014371	82017484	+	82014371	82015625	A3SS	0.33	50	50	ENSMUST00000229456.2	ENSMUSG00000068114.8	Ccdc134	chr15	protein_coding	coiled-coil domain containing 134
chr15	82015746	82018782	+	82015746;82016030	82015918;82018782	ES	0.33	50	50	ENSMUST00000229597.2	ENSMUSG00000068114.8	Ccdc134	chr15	protein_coding	coiled-coil domain containing 134
chr15	82014371;82017567	82017484;82018782	+	82014371;82015746	82015625;82018782	MXE	0.5	100	100	ENSMUST00000229411.2	ENSMUSG00000068114.8	Ccdc134	chr15	protein_coding	coiled-coil domain containing 134
chr15	82014371;82015746	82015617;82018782	+	82014371;82017567	82017484;82018782	MXE	0.5	100	100	ENSMUST00000229384.2	ENSMUSG00000068114.8	Ccdc134	chr15	protein_coding	coiled-coil domain containing 134
chr15	82014371;82016030	82015617;82018782	+	82014371;82017567	82017484;82018782	MXE	0.5	100	100	ENSMUST00000229384.2	ENSMUSG00000068114.8	Ccdc134	chr15	protein_coding	coiled-coil domain containing 134
chr15	82080493	82081855	+	82080493	82081819	A3SS	0.5	50	50	ENSMUST00000023100.8	ENSMUSG00000022463.9	Srebf2	chr15	protein_coding	sterol regulatory element binding factor 2
chr15	82032378	82053939	+	82031691	82053939	A5SS	0.5	50	50	ENSMUST00000023100.8	ENSMUSG00000022463.9	Srebf2	chr15	protein_coding	sterol regulatory element binding factor 2
chr15	82092797	82093954	-	82092797	82096090	A5SS	0.5	50	50	ENSMUST00000179269.3	ENSMUSG00000096883.3	Shisa8	chr15	protein_coding	shisa family member 8
chr15	82107444	82107920	-	82107477	82107920	A3SS	0.5	50	50	ENSMUST00000089161.10	ENSMUSG00000068105.12	Tnfrsf13c	chr15	protein_coding	tumor necrosis factor receptor superfamily, member 13c
chr15	82108123	82108261	-	82108123	82108369	A5SS	0.33	50	50	ENSMUST00000089161.10	ENSMUSG00000068105.12	Tnfrsf13c	chr15	protein_coding	tumor necrosis factor receptor superfamily, member 13c
chr15	82108123	82108421	-	82108123	82108369	A5SS	0.33	50	50	ENSMUST00000089161.10	ENSMUSG00000068105.12	Tnfrsf13c	chr15	protein_coding	tumor necrosis factor receptor superfamily, member 13c
chr15	82108123	82108421	-	82108123	82108261	A5SS	0.33	50	50	ENSMUST00000109535.3	ENSMUSG00000068105.12	Tnfrsf13c	chr15	protein_coding	tumor necrosis factor receptor superfamily, member 13c
chr15	82118710	82124080	-	82118710;82123585	82123494;82124080	ES	0.33	50	50	ENSMUST00000089157.11	ENSMUSG00000068101.12	Cenpm	chr15	protein_coding	centromere protein M
chr15	82128413	82128506	-	82128413	82128824	A5SS	0.5	50	50	ENSMUST00000089157.11	ENSMUSG00000068101.12	Cenpm	chr15	protein_coding	centromere protein M
chr15	82123493	82124080	-	82118710	82124080	A3SS	0.33	50	50	ENSMUST00000089155.6	ENSMUSG00000068101.12	Cenpm	chr15	protein_coding	centromere protein M
chr15	82123585	82124080	-	82123493	82124080	A3SS	0.33	50	50	ENSMUST00000229041.2	ENSMUSG00000068101.12	Cenpm	chr15	protein_coding	centromere protein M
chr15	82140586	82143766	+	82136949	82143766	A5SS	0.5	50	50	ENSMUST00000136948.3	ENSMUSG00000068099.6	1500009C09Rik	chr15	protein_coding	RIKEN cDNA 1500009C09 gene
chr15	82175032	82177447	+	82175032	82175454	A3SS	0.5	50	50	ENSMUST00000238416.3	ENSMUSG00000022456.19	Septin3	chr15	protein_coding	septin 3
chr15	82159254	82163616	+	82157066	82163616	A5SS	0.33	50	50	ENSMUST00000238416.3	ENSMUSG00000022456.19	Septin3	chr15	protein_coding	septin 3
chr15	82159254	82167260	+	82163807	82167260	A5SS&ES	0.5	50	50	ENSMUST00000238416.3	ENSMUSG00000022456.19	Septin3	chr15	protein_coding	septin 3
chr15	82159687	82163616	+	82157066	82163616	A5SS	0.33	50	50	ENSMUST00000238416.3	ENSMUSG00000022456.19	Septin3	chr15	protein_coding	septin 3
chr15	82159254	82167260	+	82159254;82163807	82163616;82167260	ES	0.5	50	50	ENSMUST00000116423.3	ENSMUSG00000022456.19	Septin3	chr15	protein_coding	septin 3
chr15	82159687	82163616	+	82159254	82163616	A5SS	0.33	50	50	ENSMUST00000116423.3	ENSMUSG00000022456.19	Septin3	chr15	protein_coding	septin 3
chr15	82175032	82177447	+	82175032;82175519	82175454;82177447	ES	0.5	50	50	ENSMUST00000230365.2	ENSMUSG00000022456.19	Septin3	chr15	protein_coding	septin 3
chr15	82219148	82220044	-	82219148;82219792	82219698;82220044	ES	0.5	50	50	ENSMUST00000023088.8	ENSMUSG00000022453.9	Naga	chr15	protein_coding	N-acetyl galactosaminidase, alpha
chr15	82220221	82221588	-	82220221;82221142	82220971;82221588	ES	0.5	50	50	ENSMUST00000023088.8	ENSMUSG00000022453.9	Naga	chr15	protein_coding	N-acetyl galactosaminidase, alpha
chr15	82214135	82222439	-	82221723	82222439	A3SS&ES	0.33	50	50	ENSMUST00000023088.8	ENSMUSG00000022453.9	Naga	chr15	protein_coding	N-acetyl galactosaminidase, alpha
chr15	82221697	82222439	-	82221723	82222439	A3SS	0.33	50	50	ENSMUST00000023088.8	ENSMUSG00000022453.9	Naga	chr15	protein_coding	N-acetyl galactosaminidase, alpha
chr15	82221723	82222567	-	82221723	82222439	A5SS&ES	0.5	50	50	ENSMUST00000023088.8	ENSMUSG00000022453.9	Naga	chr15	protein_coding	N-acetyl galactosaminidase, alpha
chr15	82222515	82223011	-	82222515	82222953	A5SS	0.5	50	50	ENSMUST00000023088.8	ENSMUSG00000022453.9	Naga	chr15	protein_coding	N-acetyl galactosaminidase, alpha
chr15	82221697	82222439	-	82214135	82222439	A3SS	0.33	50	50	ENSMUST00000229733.2	ENSMUSG00000022453.9	Naga	chr15	protein_coding	N-acetyl galactosaminidase, alpha
chr15	82220221	82221588	-	82221142	82221588	3pMXE	0.5	50	50	ENSMUST00000230269.2	ENSMUSG00000022453.9	Naga	chr15	protein_coding	N-acetyl galactosaminidase, alpha
chr15	82223286	82232101	+	82223286	82227260	3pMXE	0.5	50	50	ENSMUST00000159942.2	ENSMUSG00000049687.6	Pheta2	chr15	protein_coding	PH domain containing endocytic trafficking adaptor 2
chr15	82224896	82227260	+	82223286	82227260	A5SS	0.25	50	50	ENSMUST00000159942.2	ENSMUSG00000049687.6	Pheta2	chr15	protein_coding	PH domain containing endocytic trafficking adaptor 2
chr15	82225304	82227260	+	82223286	82227260	A5SS	0.25	50	50	ENSMUST00000159942.2	ENSMUSG00000049687.6	Pheta2	chr15	protein_coding	PH domain containing endocytic trafficking adaptor 2
chr15	82225472	82227260	+	82223286	82227260	A5SS	0.25	50	50	ENSMUST00000159942.2	ENSMUSG00000049687.6	Pheta2	chr15	protein_coding	PH domain containing endocytic trafficking adaptor 2
chr15	82225304	82227260	+	82224896	82227260	A5SS	0.25	50	50	ENSMUST00000162983.2	ENSMUSG00000049687.6	Pheta2	chr15	protein_coding	PH domain containing endocytic trafficking adaptor 2
chr15	82225472	82227260	+	82224896	82227260	A5SS	0.25	50	50	ENSMUST00000162983.2	ENSMUSG00000049687.6	Pheta2	chr15	protein_coding	PH domain containing endocytic trafficking adaptor 2
chr15	82225304	82232101	+	82225304	82227260	3pMXE	0.5	50	50	ENSMUST00000161178.2	ENSMUSG00000049687.6	Pheta2	chr15	protein_coding	PH domain containing endocytic trafficking adaptor 2
chr15	82225472	82227260	+	82225304	82227260	A5SS	0.25	50	50	ENSMUST00000161178.2	ENSMUSG00000049687.6	Pheta2	chr15	protein_coding	PH domain containing endocytic trafficking adaptor 2
chr15	82225304	82232101	+	82223286	82232101	A5SS	0.2	50	50	ENSMUST00000160994.8	ENSMUSG00000022452.17	Smdt1	chr15	protein_coding	single-pass membrane protein with aspartate rich tail 1
chr15	82230421	82232101	+	82223286	82232101	A5SS	0.2	50	50	ENSMUST00000160994.8	ENSMUSG00000022452.17	Smdt1	chr15	protein_coding	single-pass membrane protein with aspartate rich tail 1
chr15	82230470	82232101	+	82223286	82232101	A5SS	0.2	50	50	ENSMUST00000160994.8	ENSMUSG00000022452.17	Smdt1	chr15	protein_coding	single-pass membrane protein with aspartate rich tail 1
chr15	82231546	82232101	+	82223286	82232101	A5SS	0.2	50	50	ENSMUST00000160994.8	ENSMUSG00000022452.17	Smdt1	chr15	protein_coding	single-pass membrane protein with aspartate rich tail 1
chr15	82230421	82232101	+	82225304	82232101	A5SS	0.2	50	50	ENSMUST00000162705.2	ENSMUSG00000022452.17	Smdt1	chr15	protein_coding	single-pass membrane protein with aspartate rich tail 1
chr15	82230470	82232101	+	82225304	82232101	A5SS	0.2	50	50	ENSMUST00000162705.2	ENSMUSG00000022452.17	Smdt1	chr15	protein_coding	single-pass membrane protein with aspartate rich tail 1
chr15	82231546	82232101	+	82225304	82232101	A5SS	0.2	50	50	ENSMUST00000162705.2	ENSMUSG00000022452.17	Smdt1	chr15	protein_coding	single-pass membrane protein with aspartate rich tail 1
chr15	82230421	82232101	+	82230470	82232101	A5SS	0.2	50	50	ENSMUST00000023086.15	ENSMUSG00000022452.17	Smdt1	chr15	protein_coding	single-pass membrane protein with aspartate rich tail 1
chr15	82231546	82232101	+	82230470	82232101	A5SS	0.2	50	50	ENSMUST00000023086.15	ENSMUSG00000022452.17	Smdt1	chr15	protein_coding	single-pass membrane protein with aspartate rich tail 1
chr15	82231546	82232101	+	82230421	82232101	A5SS	0.2	50	50	ENSMUST00000161892.2	ENSMUSG00000022452.17	Smdt1	chr15	protein_coding	single-pass membrane protein with aspartate rich tail 1
chr15	82234572	82238282	-	82234572;82235295	82235180;82238282	ES	0.33	50	50	ENSMUST00000023085.7	ENSMUSG00000022450.7	Ndufa6	chr15	protein_coding	NADH:ubiquinone oxidoreductase subunit A6
chr15	82235295;82236636	82236534;82238282	-	82235295	82238282	cassetteExon	0.5	100	100	ENSMUST00000023085.7	ENSMUSG00000022450.7	Ndufa6	chr15	protein_coding	NADH:ubiquinone oxidoreductase subunit A6
chr15	82234572	82237458	-	82234572	82235180	A5SS&ES	0.33	50	50	ENSMUST00000023085.7	ENSMUSG00000022450.7	Ndufa6	chr15	protein_coding	NADH:ubiquinone oxidoreductase subunit A6
chr15	82234572	82238282	-	82234572	82235180	5pMXE	0.33	50	50	ENSMUST00000230589.2	ENSMUSG00000022450.7	Ndufa6	chr15	protein_coding	NADH:ubiquinone oxidoreductase subunit A6
chr15	82234572	82238282	-	82234572	82237458	5pMXE	0.33	50	50	ENSMUST00000230676.2	ENSMUSG00000022450.7	Ndufa6	chr15	protein_coding	NADH:ubiquinone oxidoreductase subunit A6
chr15	82236636	82238282	-	82234572	82238282	A3SS	0.33	50	50	ENSMUST00000230494.2	ENSMUSG00000022450.7	Ndufa6	chr15	protein_coding	NADH:ubiquinone oxidoreductase subunit A6
chr15	82235295	82238282	-	82235295	82236534	5pMXE	0.5	50	50	ENSMUST00000229427.2	ENSMUSG00000022450.7	Ndufa6	chr15	protein_coding	NADH:ubiquinone oxidoreductase subunit A6
chr15	82256778	82257312	-	82256778;82257127	82256986;82257312	ES	0.5	50	50	ENSMUST00000023083.9	ENSMUSG00000061740.9	Cyp2d22	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 22
chr15	82256778	82258499	-	82256778	82256986	A5SS&ES	0.33	50	50	ENSMUST00000230663.2	ENSMUSG00000061740.9	Cyp2d22	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 22
chr15	82258257	82258499	-	82256778	82258499	A3SS	0.5	50	50	ENSMUST00000228986.2	ENSMUSG00000061740.9	Cyp2d22	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 22
chr15	82256778	82257312	-	82256778	82258499	A5SS	0.33	50	50	ENSMUST00000228986.2	ENSMUSG00000061740.9	Cyp2d22	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 22
chr15	82288445	82289436	-	82288445;82288805	82288629;82289436	ES	0.33	50	50	ENSMUST00000230198.2	ENSMUSG00000094806.3	Cyp2d10	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 10
chr15	82287297;82287539	82287398;82287920	-	82287297	82287920	cassetteExon	0.5	100	100	ENSMUST00000230198.2	ENSMUSG00000094806.3	Cyp2d10	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 10
chr15	82287297;82287539	82287398;82289436	-	82287297;82288805	82287920;82289436	MXE	0.5	100	100	ENSMUST00000230198.2	ENSMUSG00000094806.3	Cyp2d10	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 10
chr15	82287297;82288107	82287920;82290108	-	82287297;82289839	82287398;82290108	MXE	0.5	100	100	ENSMUST00000229911.2	ENSMUSG00000094806.3	Cyp2d10	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 10
chr15	82287539;82288107	82287920;82290108	-	82287539;82289839	82289436;82290108	MXE	0.5	100	100	ENSMUST00000229911.2	ENSMUSG00000094806.3	Cyp2d10	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 10
chr15	82288445	82289436	-	82287539	82289436	A3SS	0.33	50	50	ENSMUST00000229911.2	ENSMUSG00000094806.3	Cyp2d10	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 10
chr15	82288445	82289687	-	82289596	82289687	A3SS&ES	0.5	50	50	ENSMUST00000229911.2	ENSMUSG00000094806.3	Cyp2d10	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 10
chr15	82288805	82289436	-	82287539	82289436	A3SS	0.33	50	50	ENSMUST00000229911.2	ENSMUSG00000094806.3	Cyp2d10	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 10
chr15	82287539;82289596	82289436;82289687	-	82287539;82288445	82287920;82289687	MXE	0.5	100	100	ENSMUST00000229628.2	ENSMUSG00000094806.3	Cyp2d10	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 10
chr15	82288445;82289596	82289436;82289687	-	82288445	82289687	cassetteExon	0.5	100	100	ENSMUST00000229628.2	ENSMUSG00000094806.3	Cyp2d10	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 10
chr15	82288445	82288629	-	82288445	82289687	A5SS	0.33	50	50	ENSMUST00000229628.2	ENSMUSG00000094806.3	Cyp2d10	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 10
chr15	82287297	82287920	-	82287539	82287920	3pMXE	0.5	50	50	ENSMUST00000230843.2	ENSMUSG00000094806.3	Cyp2d10	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 10
chr15	82289839	82290108	-	82288107	82290108	A3SS	0.5	50	50	ENSMUST00000230248.2	ENSMUSG00000094806.3	Cyp2d10	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 10
chr15	82288107	82288304	-	82288107	82290108	A5SS	0.5	50	50	ENSMUST00000230248.2	ENSMUSG00000094806.3	Cyp2d10	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 10
chr15	82337970;82338391	82338239;82338482	+	82337970	82338482	cassetteExon	0.5	100	100	ENSMUST00000229793.2	ENSMUSG00000068086.7	Cyp2d9	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 9
chr15	82317913	82319948	+	82317913	82337799	A3SS	0.5	50	50	ENSMUST00000229793.2	ENSMUSG00000068086.7	Cyp2d9	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 9
chr15	82336841	82337799	+	82317913	82337799	A5SS	0.5	50	50	ENSMUST00000229793.2	ENSMUSG00000068086.7	Cyp2d9	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 9
chr15	82339451	82339973	+	82339451;82339776	82339635;82339973	ES	0.5	50	50	ENSMUST00000089129.7	ENSMUSG00000068086.7	Cyp2d9	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 9
chr15	82336841	82337828	+	82336841	82337799	A3SS	0.5	50	50	ENSMUST00000089129.7	ENSMUSG00000068086.7	Cyp2d9	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 9
chr15	82338391	82338572	+	82338391	82338482	A3SS	0.5	50	50	ENSMUST00000089129.7	ENSMUSG00000068086.7	Cyp2d9	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 9
chr15	82340160	82340575	+	82340160	82340535	A3SS	0.5	50	50	ENSMUST00000089129.7	ENSMUSG00000068086.7	Cyp2d9	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 9
chr15	82337970	82338482	+	82337970	82338239	A3SS&ES	0.5	50	50	ENSMUST00000231136.2	ENSMUSG00000068086.7	Cyp2d9	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 9
chr15	82339451	82340535	+	82339451;82340160	82339973;82340535	ES	0.5	50	50	ENSMUST00000230191.2	ENSMUSG00000068086.7	Cyp2d9	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 9
chr15	82339451	82339973	+	82339451	82339635	3pMXE	0.33	50	50	ENSMUST00000229473.2	ENSMUSG00000068086.7	Cyp2d9	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 9
chr15	82339451	82340535	+	82339451	82339635	3pMXE	0.33	50	50	ENSMUST00000229473.2	ENSMUSG00000068086.7	Cyp2d9	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 9
chr15	82337970	82338482	+	82338391	82338482	5pMXE	0.5	50	50	ENSMUST00000230000.2	ENSMUSG00000068086.7	Cyp2d9	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 9
chr15	82440573;82440997	82440845;82441077	+	82440573	82441077	cassetteExon	0.5	100	100	ENSMUST00000229103.2	ENSMUSG00000096852.3	Cyp2d12	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 12
chr15	82439536	82440402	+	82439536	82440431	A3SS	0.5	50	50	ENSMUST00000229103.2	ENSMUSG00000096852.3	Cyp2d12	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 12
chr15	82503274	82504870	-	82503303	82504870	A3SS	0.5	50	50	ENSMUST00000109515.3	ENSMUSG00000094559.3	Cyp2d34	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 34
chr15	82524701;82525157	82524986;82525986	-	82524701	82525986	cassetteExon	0.5	100	100	ENSMUST00000238885.2	ENSMUSG00000118516.2	Cyp2d13	chr15	polymorphic_pseudogene	cytochrome P450, family 2, subfamily d, polypeptide 13
chr15	82574739;82575561	82575401;82575643	-	82574739;82575346	82575172;82575643	MXE	0.5	100	100	ENSMUST00000100380.5	ENSMUSG00000075517.6	Cyp2d37-ps	chr15	transcribed_unprocessed_pseudogene	cytochrome P450, family 2, subfamily d, polypeptide 37, pseudogene
chr15	82575795;82576244	82576073;82577014	-	82575795	82577014	cassetteExon	0.5	100	100	ENSMUST00000100380.5	ENSMUSG00000075517.6	Cyp2d37-ps	chr15	transcribed_unprocessed_pseudogene	cytochrome P450, family 2, subfamily d, polypeptide 37, pseudogene
chr15	82574063	82574283	-	82574063	82574176	A5SS	0.5	50	50	ENSMUST00000100380.5	ENSMUSG00000075517.6	Cyp2d37-ps	chr15	transcribed_unprocessed_pseudogene	cytochrome P450, family 2, subfamily d, polypeptide 37, pseudogene
chr15	82590500	82591313	-	82578054	82591313	A3SS	0.5	50	50	ENSMUST00000229532.2	ENSMUSG00000116354.2	Cyp2d38-ps	chr15	transcribed_unprocessed_pseudogene	cytochrome P450, family 2, subfamily d, member 38, pseudogene
chr15	82677469	82678186	-	82677498	82678186	A3SS	0.5	50	50	ENSMUST00000006094.6	ENSMUSG00000022445.8	Cyp2d26	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 26
chr15	82677061	82677406	-	82677061	82677327	A5SS	0.5	50	50	ENSMUST00000006094.6	ENSMUSG00000022445.8	Cyp2d26	chr15	protein_coding	cytochrome P450, family 2, subfamily d, polypeptide 26
chr15	82741485	82847622	-	82741485	82796187	5pMXE	0.25	50	50	ENSMUST00000048966.7	ENSMUSG00000041852.16	Tcf20	chr15	protein_coding	transcription factor 20
chr15	82741485	82871817	-	82741485	82796187	5pMXE	0.25	50	50	ENSMUST00000048966.7	ENSMUSG00000041852.16	Tcf20	chr15	protein_coding	transcription factor 20
chr15	82693988;82698804	82698682;82699812	-	82693988	82699812	cassetteExon	0.5	100	100	ENSMUST00000048966.7	ENSMUSG00000041852.16	Tcf20	chr15	protein_coding	transcription factor 20
chr15	82741485	82783703	-	82741485	82796187	A5SS	0.25	50	50	ENSMUST00000048966.7	ENSMUSG00000041852.16	Tcf20	chr15	protein_coding	transcription factor 20
chr15	82741485	82871817	-	82741485	82847622	5pMXE	0.25	50	50	ENSMUST00000229547.2	ENSMUSG00000041852.16	Tcf20	chr15	protein_coding	transcription factor 20
chr15	82741485	82783703	-	82741485	82847622	A5SS	0.25	50	50	ENSMUST00000229547.2	ENSMUSG00000041852.16	Tcf20	chr15	protein_coding	transcription factor 20
chr15	82741485	82871817	-	82741485	82783703	5pMXE	0.25	50	50	ENSMUST00000230403.2	ENSMUSG00000041852.16	Tcf20	chr15	protein_coding	transcription factor 20
chr15	82867174	82871817	-	82741485	82871817	A3SS	0.33	50	50	ENSMUST00000229439.2	ENSMUSG00000041852.16	Tcf20	chr15	protein_coding	transcription factor 20
chr15	82870673	82871817	-	82741485	82871817	A3SS	0.33	50	50	ENSMUST00000229439.2	ENSMUSG00000041852.16	Tcf20	chr15	protein_coding	transcription factor 20
chr15	82867174	82871817	-	82867174;82870673	82870574;82871817	ES	0.5	50	50	ENSMUST00000188623.2	ENSMUSG00000100552.2	Gm29019	chr15	lncRNA	predicted gene 29019
chr15	82900792	82917314	-	82900862	82917314	A3SS	0.5	50	50	ENSMUST00000231165.2	ENSMUSG00000058099.17	Nfam1	chr15	protein_coding	Nfat activating molecule with ITAM motif 1
chr15	82900862	82907128	-	82900862	82917314	A5SS	0.33	50	50	ENSMUST00000231165.2	ENSMUSG00000058099.17	Nfam1	chr15	protein_coding	Nfat activating molecule with ITAM motif 1
chr15	82900862	82914028	-	82900862	82917314	A5SS	0.33	50	50	ENSMUST00000231165.2	ENSMUSG00000058099.17	Nfam1	chr15	protein_coding	Nfat activating molecule with ITAM motif 1
chr15	82900792	82917314	-	82900792	82907128	5pMXE	0.5	50	50	ENSMUST00000109503.10	ENSMUSG00000058099.17	Nfam1	chr15	protein_coding	Nfat activating molecule with ITAM motif 1
chr15	82900862	82907128	-	82900792	82907128	A3SS	0.5	50	50	ENSMUST00000109503.10	ENSMUSG00000058099.17	Nfam1	chr15	protein_coding	Nfat activating molecule with ITAM motif 1
chr15	82900862	82907128	-	82900862	82914028	A5SS	0.33	50	50	ENSMUST00000023076.6	ENSMUSG00000058099.17	Nfam1	chr15	protein_coding	Nfat activating molecule with ITAM motif 1
chr15	82973966	82985845	+	82973966;82981392	82981300;82985845	ES	0.25	50	50	ENSMUST00000142265.9	ENSMUSG00000058586.13	Serhl	chr15	protein_coding	serine hydrolase-like
chr15	82981392;82984201	82983995;82985845	+	82981392	82985845	cassetteExon	0.5	100	100	ENSMUST00000142265.9	ENSMUSG00000058586.13	Serhl	chr15	protein_coding	serine hydrolase-like
chr15	82977135	82981300	+	82973966	82981300	A5SS	0.5	50	50	ENSMUST00000142265.9	ENSMUSG00000058586.13	Serhl	chr15	protein_coding	serine hydrolase-like
chr15	82984548	82985845	+	82981392	82985845	A5SS	0.25	50	50	ENSMUST00000142265.9	ENSMUSG00000058586.13	Serhl	chr15	protein_coding	serine hydrolase-like
chr15	82986541	82987135	+	82986541;82986845	82986826;82987135	ES	0.33	50	50	ENSMUST00000168029.8	ENSMUSG00000058586.13	Serhl	chr15	protein_coding	serine hydrolase-like
chr15	82984201	82985845	+	82973966	82985845	A5SS	0.25	50	50	ENSMUST00000168029.8	ENSMUSG00000058586.13	Serhl	chr15	protein_coding	serine hydrolase-like
chr15	82984548	82985845	+	82973966	82985845	A5SS	0.25	50	50	ENSMUST00000168029.8	ENSMUSG00000058586.13	Serhl	chr15	protein_coding	serine hydrolase-like
chr15	82984548	82986073	+	82985994	82986073	A5SS&ES	0.5	50	50	ENSMUST00000168029.8	ENSMUSG00000058586.13	Serhl	chr15	protein_coding	serine hydrolase-like
chr15	82986885	82987135	+	82986845	82987135	A5SS	0.33	50	50	ENSMUST00000168029.8	ENSMUSG00000058586.13	Serhl	chr15	protein_coding	serine hydrolase-like
chr15	82984548	82985845	+	82984201	82985845	A5SS	0.33	50	50	ENSMUST00000167862.2	ENSMUSG00000058586.13	Serhl	chr15	protein_coding	serine hydrolase-like
chr15	82973966	82985845	+	82981392	82985845	5pMXE	0.25	50	50	ENSMUST00000165371.8	ENSMUSG00000058586.13	Serhl	chr15	protein_coding	serine hydrolase-like
chr15	82986541	82987135	+	82986541;82986885	82986826;82987135	ES	0.33	50	50	ENSMUST00000165371.8	ENSMUSG00000058586.13	Serhl	chr15	protein_coding	serine hydrolase-like
chr15	82984548	82986073	+	82984548;82985994	82985845;82986073	ES	0.5	50	50	ENSMUST00000078218.11	ENSMUSG00000058586.13	Serhl	chr15	protein_coding	serine hydrolase-like
chr15	82998640	83000458	+	82998640;82999864	82999768;83000458	ES	0.5	50	50	ENSMUST00000078218.11	ENSMUSG00000058586.13	Serhl	chr15	protein_coding	serine hydrolase-like
chr15	82996445;82997119	82996955;82998558	+	82996445	82998558	cassetteExon	0.5	100	100	ENSMUST00000078218.11	ENSMUSG00000058586.13	Serhl	chr15	protein_coding	serine hydrolase-like
chr15	82990807	82996411	+	82989891	82996411	A5SS	0.5	50	50	ENSMUST00000078218.11	ENSMUSG00000058586.13	Serhl	chr15	protein_coding	serine hydrolase-like
chr15	82984548	82986073	+	82984548	82985845	A3SS	0.5	50	50	ENSMUST00000167645.8	ENSMUSG00000058586.13	Serhl	chr15	protein_coding	serine hydrolase-like
chr15	82986541	82987135	+	82986541	82986826	A3SS	0.5	50	50	ENSMUST00000172101.8	ENSMUSG00000058586.13	Serhl	chr15	protein_coding	serine hydrolase-like
chr15	82998640	83000458	+	82998640	82999768	3pMXE	0.5	50	50	ENSMUST00000167635.8	ENSMUSG00000058586.13	Serhl	chr15	protein_coding	serine hydrolase-like
chr15	82996445	82998558	+	82997119	82998558	5pMXE	0.5	50	50	ENSMUST00000170891.2	ENSMUSG00000058586.13	Serhl	chr15	protein_coding	serine hydrolase-like
chr15	82998640	83000458	+	82999864	83000458	5pMXE	0.5	50	50	ENSMUST00000169461.2	ENSMUSG00000058586.13	Serhl	chr15	protein_coding	serine hydrolase-like
chr15	83003503	83003715	-	83003503	83004093	A5SS	0.5	50	50	ENSMUST00000018184.10	ENSMUSG00000018040.10	Rrp7a	chr15	protein_coding	ribosomal RNA processing 7 homolog A
chr15	83019590	83022333	-	83019590;83021755	83021669;83022333	ES	0.33	50	50	ENSMUST00000058793.14	ENSMUSG00000041815.15	Poldip3	chr15	protein_coding	polymerase (DNA-directed), delta interacting protein 3
chr15	83017527	83022333	-	83017527;83019590	83019495;83022333	ES	0.33	50	50	ENSMUST00000100375.11	ENSMUSG00000041815.15	Poldip3	chr15	protein_coding	polymerase (DNA-directed), delta interacting protein 3
chr15	83021755	83022333	-	83017527	83022333	A3SS	0.33	50	50	ENSMUST00000129372.2	ENSMUSG00000041815.15	Poldip3	chr15	protein_coding	polymerase (DNA-directed), delta interacting protein 3
chr15	83017527	83022333	-	83017527	83019495	5pMXE	0.5	50	50	ENSMUST00000135013.2	ENSMUSG00000041815.15	Poldip3	chr15	protein_coding	polymerase (DNA-directed), delta interacting protein 3
chr15	83019590	83022333	-	83021755	83022333	3pMXE	0.33	50	50	ENSMUST00000149802.2	ENSMUSG00000041815.15	Poldip3	chr15	protein_coding	polymerase (DNA-directed), delta interacting protein 3
chr15	83050407	83054635	-	83050407	83054338	5pMXE	0.33	50	50	ENSMUST00000162834.3	ENSMUSG00000018042.19	Cyb5r3	chr15	protein_coding	cytochrome b5 reductase 3
chr15	83050407	83056313	-	83050407	83054338	5pMXE	0.33	50	50	ENSMUST00000162834.3	ENSMUSG00000018042.19	Cyb5r3	chr15	protein_coding	cytochrome b5 reductase 3
chr15	83050407	83054635	-	83050407	83056313	A5SS	0.33	50	50	ENSMUST00000018186.16	ENSMUSG00000018042.19	Cyb5r3	chr15	protein_coding	cytochrome b5 reductase 3
chr15	83112795	83135818	-	83112795	83114715	A5SS&ES	0.5	50	50	ENSMUST00000049530.14	ENSMUSG00000047878.14	A4galt	chr15	protein_coding	alpha 1,4-galactosyltransferase
chr15	83114858	83135818	-	83114858	83135901	A5SS	0.5	50	50	ENSMUST00000049530.14	ENSMUSG00000047878.14	A4galt	chr15	protein_coding	alpha 1,4-galactosyltransferase
chr15	83112795	83135818	-	83112795;83114858	83114715;83135818	ES	0.5	50	50	ENSMUST00000164614.3	ENSMUSG00000047878.14	A4galt	chr15	protein_coding	alpha 1,4-galactosyltransferase
chr15	83112795	83135818	-	83114858	83135818	3pMXE	0.5	50	50	ENSMUST00000229454.2	ENSMUSG00000047878.14	A4galt	chr15	protein_coding	alpha 1,4-galactosyltransferase
chr15	83194582	83197670	-	83194585	83197670	A3SS	0.5	50	50	ENSMUST00000067215.9	ENSMUSG00000054277.9	Arfgap3	chr15	protein_coding	ADP-ribosylation factor GTPase activating protein 3
chr15	83187425	83189442	-	83187425	83191082	A5SS	0.5	50	50	ENSMUST00000067215.9	ENSMUSG00000054277.9	Arfgap3	chr15	protein_coding	ADP-ribosylation factor GTPase activating protein 3
chr15	83242238;83243151	83243024;83249230	-	83242238	83249230	cassetteExon	0.5	100	100	ENSMUST00000178628.9	ENSMUSG00000075511.10	1700001L05Rik	chr15	lncRNA	RIKEN cDNA 1700001L05 gene
chr15	83248129	83249230	-	83242238	83249230	A3SS	0.33	50	50	ENSMUST00000178628.9	ENSMUSG00000075511.10	1700001L05Rik	chr15	lncRNA	RIKEN cDNA 1700001L05 gene
chr15	83249711	83251191	-	83249714	83251191	A3SS	0.5	50	50	ENSMUST00000178628.9	ENSMUSG00000075511.10	1700001L05Rik	chr15	lncRNA	RIKEN cDNA 1700001L05 gene
chr15	83249714	83251070	-	83249714	83251191	A5SS	0.5	50	50	ENSMUST00000178628.9	ENSMUSG00000075511.10	1700001L05Rik	chr15	lncRNA	RIKEN cDNA 1700001L05 gene
chr15	83243151;83248129	83248021;83249230	-	83243151	83249230	cassetteExon	0.5	100	100	ENSMUST00000179705.2	ENSMUSG00000075511.10	1700001L05Rik	chr15	lncRNA	RIKEN cDNA 1700001L05 gene
chr15	83242238	83249230	-	83243151	83249230	3pMXE	0.33	50	50	ENSMUST00000177890.2	ENSMUSG00000075511.10	1700001L05Rik	chr15	lncRNA	RIKEN cDNA 1700001L05 gene
chr15	83263396	83265963	-	83263396;83264007	83263885;83265963	ES	0.5	50	50	ENSMUST00000171436.8	ENSMUSG00000016664.17	Pacsin2	chr15	protein_coding	protein kinase C and casein kinase substrate in neurons 2
chr15	83266084;83267829	83267824;83269188	-	83266084	83269188	cassetteExon	0.5	100	100	ENSMUST00000171436.8	ENSMUSG00000016664.17	Pacsin2	chr15	protein_coding	protein kinase C and casein kinase substrate in neurons 2
chr15	83286200;83337166	83337068;83348660	-	83286200	83348660	cassetteExon	0.5	100	100	ENSMUST00000171436.8	ENSMUSG00000016664.17	Pacsin2	chr15	protein_coding	protein kinase C and casein kinase substrate in neurons 2
chr15	83269308	83269536	-	83269308	83270863	A5SS	0.5	50	50	ENSMUST00000171436.8	ENSMUSG00000016664.17	Pacsin2	chr15	protein_coding	protein kinase C and casein kinase substrate in neurons 2
chr15	83286200	83307874	-	83286200	83348660	A5SS	0.2	50	50	ENSMUST00000171436.8	ENSMUSG00000016664.17	Pacsin2	chr15	protein_coding	protein kinase C and casein kinase substrate in neurons 2
chr15	83286200	83316865	-	83286200	83348660	A5SS	0.2	50	50	ENSMUST00000171436.8	ENSMUSG00000016664.17	Pacsin2	chr15	protein_coding	protein kinase C and casein kinase substrate in neurons 2
chr15	83286200	83316953	-	83286200	83348660	A5SS	0.2	50	50	ENSMUST00000171436.8	ENSMUSG00000016664.17	Pacsin2	chr15	protein_coding	protein kinase C and casein kinase substrate in neurons 2
chr15	83286200	83337068	-	83286200	83316865	5pMXE	0.2	50	50	ENSMUST00000165095.9	ENSMUSG00000016664.17	Pacsin2	chr15	protein_coding	protein kinase C and casein kinase substrate in neurons 2
chr15	83286200	83307874	-	83286200	83316865	A5SS	0.2	50	50	ENSMUST00000165095.9	ENSMUSG00000016664.17	Pacsin2	chr15	protein_coding	protein kinase C and casein kinase substrate in neurons 2
chr15	83286200	83316953	-	83286200	83316865	A5SS	0.2	50	50	ENSMUST00000165095.9	ENSMUSG00000016664.17	Pacsin2	chr15	protein_coding	protein kinase C and casein kinase substrate in neurons 2
chr15	83286200	83337068	-	83286200	83316953	5pMXE	0.2	50	50	ENSMUST00000231184.2	ENSMUSG00000016664.17	Pacsin2	chr15	protein_coding	protein kinase C and casein kinase substrate in neurons 2
chr15	83286200	83307874	-	83286200	83316953	A5SS	0.2	50	50	ENSMUST00000231184.2	ENSMUSG00000016664.17	Pacsin2	chr15	protein_coding	protein kinase C and casein kinase substrate in neurons 2
chr15	83286200	83337068	-	83286200	83307874	5pMXE	0.2	50	50	ENSMUST00000230816.2	ENSMUSG00000016664.17	Pacsin2	chr15	protein_coding	protein kinase C and casein kinase substrate in neurons 2
chr15	83389567;83389933	83389886;83390481	-	83389567;83389844	83389684;83390481	MXE	0.5	100	100	ENSMUST00000016897.12	ENSMUSG00000022442.17	Ttll1	chr15	protein_coding	tubulin tyrosine ligase-like 1
chr15	83390528;83393997	83393864;83394935	-	83390528	83394935	cassetteExon	0.5	100	100	ENSMUST00000016897.12	ENSMUSG00000022442.17	Ttll1	chr15	protein_coding	tubulin tyrosine ligase-like 1
chr15	83376826	83380473	-	83376830	83380473	A3SS	0.5	50	50	ENSMUST00000016897.12	ENSMUSG00000022442.17	Ttll1	chr15	protein_coding	tubulin tyrosine ligase-like 1
chr15	83411542	83425496	+	83411137	83425496	A5SS	0.33	50	50	ENSMUST00000016902.5	ENSMUSG00000016758.5	Bik	chr15	protein_coding	BCL2-interacting killer
chr15	83417860	83425496	+	83411137	83425496	A5SS	0.33	50	50	ENSMUST00000016902.5	ENSMUSG00000016758.5	Bik	chr15	protein_coding	BCL2-interacting killer
chr15	83426866	83427266	+	83425643	83427266	A5SS	0.5	50	50	ENSMUST00000016902.5	ENSMUSG00000016758.5	Bik	chr15	protein_coding	BCL2-interacting killer
chr15	83417860	83425496	+	83411542	83425496	A5SS	0.33	50	50	ENSMUST00000230912.2	ENSMUSG00000016758.5	Bik	chr15	protein_coding	BCL2-interacting killer
chr15	83432143	83436735	-	83432143;83433536	83433319;83436735	ES	0.5	50	50	ENSMUST00000061882.10	ENSMUSG00000048755.10	Mcat	chr15	protein_coding	malonyl CoA:ACP acyltransferase (mitochondrial)
chr15	83436822	83447790	-	83436822	83439472	5pMXE	0.5	50	50	ENSMUST00000061882.10	ENSMUSG00000048755.10	Mcat	chr15	protein_coding	malonyl CoA:ACP acyltransferase (mitochondrial)
chr15	83437648	83439472	-	83436822	83439472	A3SS	0.5	50	50	ENSMUST00000061882.10	ENSMUSG00000048755.10	Mcat	chr15	protein_coding	malonyl CoA:ACP acyltransferase (mitochondrial)
chr15	83432143	83436735	-	83433536	83436735	3pMXE	0.5	50	50	ENSMUST00000230094.2	ENSMUSG00000048755.10	Mcat	chr15	protein_coding	malonyl CoA:ACP acyltransferase (mitochondrial)
chr15	83448289	83455586	+	83447845	83455586	A5SS	0.5	50	50	ENSMUST00000047419.8	ENSMUSG00000041736.8	Tspo	chr15	protein_coding	translocator protein
chr15	83472902	83479150	-	83472902;83475749	83475580;83479150	ES	0.5	50	50	ENSMUST00000016901.5	ENSMUSG00000016757.12	Ttll12	chr15	protein_coding	tubulin tyrosine ligase-like family, member 12
chr15	83523021;83535945	83535856;83538370	-	83523021	83538370	cassetteExon	0.5	100	100	ENSMUST00000144773.2	ENSMUSG00000016763.16	Scube1	chr15	protein_coding	signal peptide, CUB domain, EGF-like 1
chr15	83497806	83499071	-	83497806	83499065	A5SS	0.5	50	50	ENSMUST00000144773.2	ENSMUSG00000016763.16	Scube1	chr15	protein_coding	signal peptide, CUB domain, EGF-like 1
chr15	83492510	83492925	-	83492498	83492925	A3SS	0.5	50	50	ENSMUST00000043634.12	ENSMUSG00000016763.16	Scube1	chr15	protein_coding	signal peptide, CUB domain, EGF-like 1
chr15	83543352	83561107	-	83523021	83561107	A3SS	0.5	50	50	ENSMUST00000043634.12	ENSMUSG00000016763.16	Scube1	chr15	protein_coding	signal peptide, CUB domain, EGF-like 1
chr15	83523021	83535856	-	83523021	83561107	A5SS	0.33	50	50	ENSMUST00000043634.12	ENSMUSG00000016763.16	Scube1	chr15	protein_coding	signal peptide, CUB domain, EGF-like 1
chr15	83523021	83538370	-	83523021	83561107	A5SS	0.33	50	50	ENSMUST00000043634.12	ENSMUSG00000016763.16	Scube1	chr15	protein_coding	signal peptide, CUB domain, EGF-like 1
chr15	83664308	83676155	+	83663850	83676155	A5SS	0.25	50	50	ENSMUST00000109469.2	ENSMUSG00000041708.13	Mpped1	chr15	protein_coding	metallophosphoesterase domain containing 1
chr15	83669130	83676155	+	83663850	83676155	A5SS	0.25	50	50	ENSMUST00000109469.2	ENSMUSG00000041708.13	Mpped1	chr15	protein_coding	metallophosphoesterase domain containing 1
chr15	83673281	83676155	+	83663850	83676155	A5SS	0.25	50	50	ENSMUST00000109469.2	ENSMUSG00000041708.13	Mpped1	chr15	protein_coding	metallophosphoesterase domain containing 1
chr15	83664308	83676155	+	83664308	83720474	A3SS	0.5	50	50	ENSMUST00000163723.8	ENSMUSG00000041708.13	Mpped1	chr15	protein_coding	metallophosphoesterase domain containing 1
chr15	83720699	83736245	+	83720699	83736241	A3SS	0.5	50	50	ENSMUST00000163723.8	ENSMUSG00000041708.13	Mpped1	chr15	protein_coding	metallophosphoesterase domain containing 1
chr15	83684360	83736241	+	83720699	83736241	A5SS&ES	0.33	50	50	ENSMUST00000163723.8	ENSMUSG00000041708.13	Mpped1	chr15	protein_coding	metallophosphoesterase domain containing 1
chr15	83684385	83720474	+	83664308	83720474	A5SS	0.33	50	50	ENSMUST00000163723.8	ENSMUSG00000041708.13	Mpped1	chr15	protein_coding	metallophosphoesterase domain containing 1
chr15	83684385	83736241	+	83720699	83736241	A5SS&ES	0.33	50	50	ENSMUST00000163723.8	ENSMUSG00000041708.13	Mpped1	chr15	protein_coding	metallophosphoesterase domain containing 1
chr15	83720348	83720474	+	83664308	83720474	A5SS	0.33	50	50	ENSMUST00000163723.8	ENSMUSG00000041708.13	Mpped1	chr15	protein_coding	metallophosphoesterase domain containing 1
chr15	83684385	83736241	+	83684385;83720699	83720474;83736241	ES	0.33	50	50	ENSMUST00000046168.12	ENSMUSG00000041708.13	Mpped1	chr15	protein_coding	metallophosphoesterase domain containing 1
chr15	83684385	83736245	+	83684385	83720474	A3SS&ES	0.33	50	50	ENSMUST00000046168.12	ENSMUSG00000041708.13	Mpped1	chr15	protein_coding	metallophosphoesterase domain containing 1
chr15	83669130	83676155	+	83664308	83676155	A5SS	0.25	50	50	ENSMUST00000046168.12	ENSMUSG00000041708.13	Mpped1	chr15	protein_coding	metallophosphoesterase domain containing 1
chr15	83673281	83676155	+	83664308	83676155	A5SS	0.25	50	50	ENSMUST00000046168.12	ENSMUSG00000041708.13	Mpped1	chr15	protein_coding	metallophosphoesterase domain containing 1
chr15	83680995	83684204	+	83676459	83684204	A5SS	0.5	50	50	ENSMUST00000046168.12	ENSMUSG00000041708.13	Mpped1	chr15	protein_coding	metallophosphoesterase domain containing 1
chr15	83720348	83720474	+	83684385	83720474	A5SS	0.33	50	50	ENSMUST00000046168.12	ENSMUSG00000041708.13	Mpped1	chr15	protein_coding	metallophosphoesterase domain containing 1
chr15	83673281	83676155	+	83669130	83676155	A5SS	0.25	50	50	ENSMUST00000109470.8	ENSMUSG00000041708.13	Mpped1	chr15	protein_coding	metallophosphoesterase domain containing 1
chr15	83684385	83736245	+	83684385	83736241	A3SS	0.33	50	50	ENSMUST00000123387.9	ENSMUSG00000041708.13	Mpped1	chr15	protein_coding	metallophosphoesterase domain containing 1
chr15	83684360	83736241	+	83684385	83736241	A5SS	0.33	50	50	ENSMUST00000123387.9	ENSMUSG00000041708.13	Mpped1	chr15	protein_coding	metallophosphoesterase domain containing 1
chr15	83684385;83720699	83720474;83736245	+	83684385	83736245	cassetteExon	0.5	100	100	ENSMUST00000172115.8	ENSMUSG00000041708.13	Mpped1	chr15	protein_coding	metallophosphoesterase domain containing 1
chr15	83684385	83736241	+	83684385	83720474	A3SS&ES	0.33	50	50	ENSMUST00000171560.2	ENSMUSG00000041708.13	Mpped1	chr15	protein_coding	metallophosphoesterase domain containing 1
chr15	83817407	83829293	-	83817407;83820233	83820116;83829293	ES	0.5	50	50	ENSMUST00000156187.8	ENSMUSG00000022441.18	Efcab6	chr15	protein_coding	EF-hand calcium binding domain 6
chr15	83756817	83763632	-	83756639	83763632	A3SS	0.5	50	50	ENSMUST00000156187.8	ENSMUSG00000022441.18	Efcab6	chr15	protein_coding	EF-hand calcium binding domain 6
chr15	83849780	83851774	-	83839254	83851774	A3SS	0.5	50	50	ENSMUST00000156187.8	ENSMUSG00000022441.18	Efcab6	chr15	protein_coding	EF-hand calcium binding domain 6
chr15	83856990	83857444	-	83851922	83857444	A3SS	0.5	50	50	ENSMUST00000156187.8	ENSMUSG00000022441.18	Efcab6	chr15	protein_coding	EF-hand calcium binding domain 6
chr15	83857562	83867645	-	83857565	83867645	A3SS	0.5	50	50	ENSMUST00000156187.8	ENSMUSG00000022441.18	Efcab6	chr15	protein_coding	EF-hand calcium binding domain 6
chr15	83763859	83767722	-	83763859	83776964	A5SS	0.5	50	50	ENSMUST00000156187.8	ENSMUSG00000022441.18	Efcab6	chr15	protein_coding	EF-hand calcium binding domain 6
chr15	83802494	83803539	-	83802494	83808430	A5SS	0.5	50	50	ENSMUST00000156187.8	ENSMUSG00000022441.18	Efcab6	chr15	protein_coding	EF-hand calcium binding domain 6
chr15	83829461	83830771	-	83829461	83831036	A5SS	0.5	50	50	ENSMUST00000156187.8	ENSMUSG00000022441.18	Efcab6	chr15	protein_coding	EF-hand calcium binding domain 6
chr15	83817407	83829293	-	83817407	83820116	5pMXE	0.5	50	50	ENSMUST00000143592.8	ENSMUSG00000022441.18	Efcab6	chr15	protein_coding	EF-hand calcium binding domain 6
chr15	83938750	83949463	-	83917341	83949463	A3SS	0.5	50	50	ENSMUST00000122836.2	ENSMUSG00000022441.18	Efcab6	chr15	protein_coding	EF-hand calcium binding domain 6
chr15	83917341	83928376	-	83917341	83949463	A5SS	0.5	50	50	ENSMUST00000122836.2	ENSMUSG00000022441.18	Efcab6	chr15	protein_coding	EF-hand calcium binding domain 6
chr15	83961783;83963098	83962970;83964388	-	83961783	83964388	cassetteExon	0.5	100	100	ENSMUST00000082365.6	ENSMUSG00000018865.10	Sult4a1	chr15	protein_coding	sulfotransferase family 4A, member 1
chr15	84066174	84070178	+	84065253	84070178	A5SS	0.5	50	50	ENSMUST00000045289.6	ENSMUSG00000041653.6	Pnpla3	chr15	protein_coding	patatin-like phospholipase domain containing 3
chr15	84070282	84070604	+	84070282	84079945	A3SS	0.5	50	50	ENSMUST00000231124.2	ENSMUSG00000116227.2	Gm49513	chr15	lncRNA	predicted gene, 49513
chr15	84076585	84079945	+	84070282	84079945	A5SS	0.5	50	50	ENSMUST00000231124.2	ENSMUSG00000116227.2	Gm49513	chr15	lncRNA	predicted gene, 49513
chr15	84088296	84088774	+	84088296	84091072	A3SS	0.5	50	50	ENSMUST00000023071.8	ENSMUSG00000022437.8	Samm50	chr15	protein_coding	SAMM50 sorting and assembly machinery component
chr15	84085485	84086431	+	84084918	84086431	A5SS	0.5	50	50	ENSMUST00000023071.8	ENSMUSG00000022437.8	Samm50	chr15	protein_coding	SAMM50 sorting and assembly machinery component
chr15	84086688	84086970	+	84086559	84086970	A5SS	0.5	50	50	ENSMUST00000023071.8	ENSMUSG00000022437.8	Samm50	chr15	protein_coding	SAMM50 sorting and assembly machinery component
chr15	84116387;84145075	84144847;84155432	+	84116387	84155432	cassetteExon	0.5	100	100	ENSMUST00000023072.7	ENSMUSG00000022438.7	Parvb	chr15	protein_coding	parvin, beta
chr15	84141406	84155432	+	84116387	84155432	A5SS	0.33	50	50	ENSMUST00000023072.7	ENSMUSG00000022438.7	Parvb	chr15	protein_coding	parvin, beta
chr15	84141406	84155432	+	84145075	84155432	A5SS&ES	0.33	50	50	ENSMUST00000122818.2	ENSMUSG00000022438.7	Parvb	chr15	protein_coding	parvin, beta
chr15	84209032	84212496	+	84209032	84211189	3pMXE	0.5	50	50	ENSMUST00000127551.2	ENSMUSG00000022439.10	Parvg	chr15	protein_coding	parvin, gamma
chr15	84210476	84211189	+	84209032	84211189	A5SS	0.5	50	50	ENSMUST00000127551.2	ENSMUSG00000022439.10	Parvg	chr15	protein_coding	parvin, gamma
chr15	84209032	84212496	+	84209032;84211284	84211189;84212496	ES	0.5	50	50	ENSMUST00000023074.9	ENSMUSG00000022439.10	Parvg	chr15	protein_coding	parvin, gamma
chr15	84212560	84212963	+	84212560	84213065	A3SS	0.33	50	50	ENSMUST00000023074.9	ENSMUSG00000022439.10	Parvg	chr15	protein_coding	parvin, gamma
chr15	84212560	84212988	+	84212560	84213065	A3SS	0.33	50	50	ENSMUST00000023074.9	ENSMUSG00000022439.10	Parvg	chr15	protein_coding	parvin, gamma
chr15	84212560	84212963	+	84212560	84212988	A3SS	0.33	50	50	ENSMUST00000139235.8	ENSMUSG00000022439.10	Parvg	chr15	protein_coding	parvin, gamma
chr15	84304433	84319346	-	84304433	84331200	A5SS	0.25	50	50	ENSMUST00000080751.10	ENSMUSG00000062760.12	Shisal1	chr15	protein_coding	shisa like 1
chr15	84304433	84327652	-	84304433	84331200	A5SS	0.25	50	50	ENSMUST00000080751.10	ENSMUSG00000062760.12	Shisal1	chr15	protein_coding	shisa like 1
chr15	84304433	84330563	-	84304433	84331200	A5SS	0.25	50	50	ENSMUST00000080751.10	ENSMUSG00000062760.12	Shisal1	chr15	protein_coding	shisa like 1
chr15	84304433	84330563	-	84304433;84319483	84319346;84330563	ES	0.5	50	50	ENSMUST00000189248.7	ENSMUSG00000062760.12	Shisal1	chr15	protein_coding	shisa like 1
chr15	84304433	84327652	-	84304433	84319346	A5SS&ES	0.33	50	50	ENSMUST00000189248.7	ENSMUSG00000062760.12	Shisal1	chr15	protein_coding	shisa like 1
chr15	84304433	84327652	-	84304433	84330563	A5SS	0.25	50	50	ENSMUST00000189994.8	ENSMUSG00000062760.12	Shisal1	chr15	protein_coding	shisa like 1
chr15	84641331;84641557	84641423;84649874	+	84641331	84649874	cassetteExon	0.5	100	100	ENSMUST00000172307.9	ENSMUSG00000078954.10	Arhgap8	chr15	protein_coding	Rho GTPase activating protein 8
chr15	84637091	84640539	+	84630056	84640539	A5SS	0.5	50	50	ENSMUST00000172307.9	ENSMUSG00000078954.10	Arhgap8	chr15	protein_coding	Rho GTPase activating protein 8
chr15	84604308	84617097	+	84604308	84614745	A3SS&ES	0.5	50	50	ENSMUST00000006029.11	ENSMUSG00000078954.10	Arhgap8	chr15	protein_coding	Rho GTPase activating protein 8
chr15	84676142	84679281	-	84676142;84678119	84678097;84679281	ES	0.5	50	50	ENSMUST00000016768.12	ENSMUSG00000016624.16	Phf21b	chr15	protein_coding	PHD finger protein 21B
chr15	84739005	84739866	-	84739005	84739192	5pMXE	0.5	50	50	ENSMUST00000016768.12	ENSMUSG00000016624.16	Phf21b	chr15	protein_coding	PHD finger protein 21B
chr15	84807851;84809097	84808970;84811569	+	84807851	84811569	cassetteExon	0.5	100	100	ENSMUST00000165443.4	ENSMUSG00000016619.11	Nup50	chr15	protein_coding	nucleoporin 50
chr15	84844822	84872711	-	84844822	84871810	5pMXE	0.5	50	50	ENSMUST00000047144.13	ENSMUSG00000036046.15	5031439G07Rik	chr15	protein_coding	RIKEN cDNA 5031439G07 gene
chr15	84921445	84928981	+	84913264	84928981	A5SS	0.25	50	50	ENSMUST00000229629.2	ENSMUSG00000022434.9	Fam118a	chr15	protein_coding	family with sequence similarity 118, member A
chr15	84923165	84928981	+	84913264	84928981	A5SS	0.25	50	50	ENSMUST00000229629.2	ENSMUSG00000022434.9	Fam118a	chr15	protein_coding	family with sequence similarity 118, member A
chr15	84927185	84928981	+	84913264	84928981	A5SS	0.25	50	50	ENSMUST00000229629.2	ENSMUSG00000022434.9	Fam118a	chr15	protein_coding	family with sequence similarity 118, member A
chr15	84921445;84923165	84922973;84928981	+	84921445	84928981	cassetteExon	0.5	100	100	ENSMUST00000023069.9	ENSMUSG00000022434.9	Fam118a	chr15	protein_coding	family with sequence similarity 118, member A
chr15	84943026;84944390	84944290;84945733	+	84943026	84945733	cassetteExon	0.5	100	100	ENSMUST00000023069.9	ENSMUSG00000022434.9	Fam118a	chr15	protein_coding	family with sequence similarity 118, member A
chr15	84927185	84928981	+	84921445	84928981	A5SS	0.25	50	50	ENSMUST00000023069.9	ENSMUSG00000022434.9	Fam118a	chr15	protein_coding	family with sequence similarity 118, member A
chr15	84927185	84928981	+	84923165	84928981	A5SS	0.33	50	50	ENSMUST00000230213.2	ENSMUSG00000022434.9	Fam118a	chr15	protein_coding	family with sequence similarity 118, member A
chr15	84970389	84975073	-	84970389;84973946	84973793;84975073	ES	0.5	50	50	ENSMUST00000023068.8	ENSMUSG00000022432.8	Smc1b	chr15	protein_coding	structural maintenance of chromosomes 1B
chr15	85022266;85025055	85024944;85025686	+	85022266	85025686	cassetteExon	0.5	100	100	ENSMUST00000023067.4	ENSMUSG00000022431.4	Ribc2	chr15	protein_coding	RIB43A domain with coiled-coils 2
chr15	85128507	85135646	+	85128507	85147460	A3SS	0.5	50	50	ENSMUST00000057410.14	ENSMUSG00000006369.15	Fbln1	chr15	protein_coding	fibulin 1
chr15	85147831	85149451	+	85147602	85149451	A5SS	0.5	50	50	ENSMUST00000057410.14	ENSMUSG00000006369.15	Fbln1	chr15	protein_coding	fibulin 1
chr15	85443330	85466477	-	85443330	85465581	5pMXE	0.2	50	50	ENSMUST00000109424.4	ENSMUSG00000022382.16	Wnt7b	chr15	protein_coding	wingless-type MMTV integration site family, member 7B
chr15	85428141	85443108	-	85428141	85443104	A5SS	0.5	50	50	ENSMUST00000109424.4	ENSMUSG00000022382.16	Wnt7b	chr15	protein_coding	wingless-type MMTV integration site family, member 7B
chr15	85443330	85450939	-	85443330	85465581	A5SS	0.2	50	50	ENSMUST00000109424.4	ENSMUSG00000022382.16	Wnt7b	chr15	protein_coding	wingless-type MMTV integration site family, member 7B
chr15	85443330	85461709	-	85443330	85465581	A5SS	0.2	50	50	ENSMUST00000109424.4	ENSMUSG00000022382.16	Wnt7b	chr15	protein_coding	wingless-type MMTV integration site family, member 7B
chr15	85443330	85464452	-	85443330	85465581	A5SS	0.2	50	50	ENSMUST00000109424.4	ENSMUSG00000022382.16	Wnt7b	chr15	protein_coding	wingless-type MMTV integration site family, member 7B
chr15	85443330	85450939	-	85443330	85466477	A5SS	0.2	50	50	ENSMUST00000229495.2	ENSMUSG00000022382.16	Wnt7b	chr15	protein_coding	wingless-type MMTV integration site family, member 7B
chr15	85443330	85461709	-	85443330	85466477	A5SS	0.2	50	50	ENSMUST00000229495.2	ENSMUSG00000022382.16	Wnt7b	chr15	protein_coding	wingless-type MMTV integration site family, member 7B
chr15	85443330	85464452	-	85443330	85466477	A5SS	0.2	50	50	ENSMUST00000229495.2	ENSMUSG00000022382.16	Wnt7b	chr15	protein_coding	wingless-type MMTV integration site family, member 7B
chr15	85443330	85450939	-	85443330	85464452	A5SS	0.2	50	50	ENSMUST00000167968.9	ENSMUSG00000022382.16	Wnt7b	chr15	protein_coding	wingless-type MMTV integration site family, member 7B
chr15	85443330	85461709	-	85443330	85464452	A5SS	0.2	50	50	ENSMUST00000167968.9	ENSMUSG00000022382.16	Wnt7b	chr15	protein_coding	wingless-type MMTV integration site family, member 7B
chr15	85443330	85450939	-	85443330	85461709	A5SS	0.2	50	50	ENSMUST00000229191.2	ENSMUSG00000022382.16	Wnt7b	chr15	protein_coding	wingless-type MMTV integration site family, member 7B
chr15	85619847	85620995	+	85619346	85620995	A5SS	0.2	50	50	ENSMUST00000134880.8	ENSMUSG00000022383.14	Ppara	chr15	protein_coding	peroxisome proliferator activated receptor alpha
chr15	85619914	85620995	+	85619346	85620995	A5SS	0.2	50	50	ENSMUST00000134880.8	ENSMUSG00000022383.14	Ppara	chr15	protein_coding	peroxisome proliferator activated receptor alpha
chr15	85620297	85620995	+	85619346	85620995	A5SS	0.2	50	50	ENSMUST00000134880.8	ENSMUSG00000022383.14	Ppara	chr15	protein_coding	peroxisome proliferator activated receptor alpha
chr15	85620373	85620995	+	85619346	85620995	A5SS	0.2	50	50	ENSMUST00000134880.8	ENSMUSG00000022383.14	Ppara	chr15	protein_coding	peroxisome proliferator activated receptor alpha
chr15	85656482	85661722	+	85621079	85661722	A5SS	0.5	50	50	ENSMUST00000134880.8	ENSMUSG00000022383.14	Ppara	chr15	protein_coding	peroxisome proliferator activated receptor alpha
chr15	85619914	85620995	+	85619847	85620995	A5SS	0.2	50	50	ENSMUST00000109423.8	ENSMUSG00000022383.14	Ppara	chr15	protein_coding	peroxisome proliferator activated receptor alpha
chr15	85620297	85620995	+	85619847	85620995	A5SS	0.2	50	50	ENSMUST00000109423.8	ENSMUSG00000022383.14	Ppara	chr15	protein_coding	peroxisome proliferator activated receptor alpha
chr15	85620373	85620995	+	85619847	85620995	A5SS	0.2	50	50	ENSMUST00000109423.8	ENSMUSG00000022383.14	Ppara	chr15	protein_coding	peroxisome proliferator activated receptor alpha
chr15	85620297	85620995	+	85619914	85620995	A5SS	0.2	50	50	ENSMUST00000138813.8	ENSMUSG00000022383.14	Ppara	chr15	protein_coding	peroxisome proliferator activated receptor alpha
chr15	85620373	85620995	+	85619914	85620995	A5SS	0.2	50	50	ENSMUST00000138813.8	ENSMUSG00000022383.14	Ppara	chr15	protein_coding	peroxisome proliferator activated receptor alpha
chr15	85620373	85620995	+	85620297	85620995	A5SS	0.2	50	50	ENSMUST00000109422.8	ENSMUSG00000022383.14	Ppara	chr15	protein_coding	peroxisome proliferator activated receptor alpha
chr15	85693525	85695840	-	85693525;85695249	85695103;85695840	ES	0.5	50	50	ENSMUST00000071876.13	ENSMUSG00000064284.13	Cdpf1	chr15	protein_coding	cysteine rich, DPF motif domain containing 1
chr15	85693525	85695044	-	85693525	85695103	A5SS	0.33	50	50	ENSMUST00000071876.13	ENSMUSG00000064284.13	Cdpf1	chr15	protein_coding	cysteine rich, DPF motif domain containing 1
chr15	85695249	85695752	-	85695249	85695840	A5SS	0.5	50	50	ENSMUST00000071876.13	ENSMUSG00000064284.13	Cdpf1	chr15	protein_coding	cysteine rich, DPF motif domain containing 1
chr15	85693525	85695840	-	85693525;85695249	85695044;85695840	ES	0.5	50	50	ENSMUST00000134631.8	ENSMUSG00000064284.13	Cdpf1	chr15	protein_coding	cysteine rich, DPF motif domain containing 1
chr15	85693525	85695840	-	85693525	85695103	A5SS&ES	0.33	50	50	ENSMUST00000144067.8	ENSMUSG00000064284.13	Cdpf1	chr15	protein_coding	cysteine rich, DPF motif domain containing 1
chr15	85716620;85717269	85717177;85717348	+	85716620	85717348	cassetteExon	0.5	100	100	ENSMUST00000146088.8	ENSMUSG00000035944.18	Ttc38	chr15	protein_coding	tetratricopeptide repeat domain 38
chr15	85718772	85720221	+	85718772	85725666	A3SS	0.5	50	50	ENSMUST00000124011.2	ENSMUSG00000035944.18	Ttc38	chr15	protein_coding	tetratricopeptide repeat domain 38
chr15	85723080	85725666	+	85718772	85725666	A5SS	0.5	50	50	ENSMUST00000124011.2	ENSMUSG00000035944.18	Ttc38	chr15	protein_coding	tetratricopeptide repeat domain 38
chr15	85774528	85776823	+	85774528	85776768	3pMXE	0.5	50	50	ENSMUST00000162491.8	ENSMUSG00000022386.13	Trmu	chr15	protein_coding	tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
chr15	85763659;85765044	85764979;85766875	+	85763659	85766875	cassetteExon	0.5	100	100	ENSMUST00000162491.8	ENSMUSG00000022386.13	Trmu	chr15	protein_coding	tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
chr15	85767040;85769393	85769287;85774406	+	85767040	85774406	cassetteExon	0.5	100	100	ENSMUST00000162491.8	ENSMUSG00000022386.13	Trmu	chr15	protein_coding	tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
chr15	85778221;85778484	85778379;85779127	+	85778221	85779127	cassetteExon	0.5	100	100	ENSMUST00000023019.12	ENSMUSG00000022386.13	Trmu	chr15	protein_coding	tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
chr15	85767040	85774406	+	85769393	85774406	5pMXE	0.5	50	50	ENSMUST00000162339.8	ENSMUSG00000022386.13	Trmu	chr15	protein_coding	tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
chr15	85778221	85779127	+	85778484	85779127	5pMXE	0.5	50	50	ENSMUST00000162010.8	ENSMUSG00000022386.13	Trmu	chr15	protein_coding	tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
chr15	85784939	85785138	-	85784906	85785138	A3SS	0.5	50	50	ENSMUST00000016172.10	ENSMUSG00000016028.12	Celsr1	chr15	protein_coding	cadherin, EGF LAG seven-pass G-type receptor 1
chr15	85785870	85786316	-	85785873	85786316	A3SS	0.5	50	50	ENSMUST00000016172.10	ENSMUSG00000016028.12	Celsr1	chr15	protein_coding	cadherin, EGF LAG seven-pass G-type receptor 1
chr15	85786443	85787003	-	85786753	85787003	A3SS&ES	0.5	50	50	ENSMUST00000016172.10	ENSMUSG00000016028.12	Celsr1	chr15	protein_coding	cadherin, EGF LAG seven-pass G-type receptor 1
chr15	86012914	86013821	+	86012914	86013851	A3SS	0.5	50	50	ENSMUST00000088931.10	ENSMUSG00000035900.19	Gramd4	chr15	protein_coding	GRAM domain containing 4
chr15	86017960	86018987	+	86017960	86019082	A3SS	0.5	50	50	ENSMUST00000088931.10	ENSMUSG00000035900.19	Gramd4	chr15	protein_coding	GRAM domain containing 4
chr15	85943162	85975514	+	85942032	85975514	A5SS	0.33	50	50	ENSMUST00000088931.10	ENSMUSG00000035900.19	Gramd4	chr15	protein_coding	GRAM domain containing 4
chr15	85959185	85975514	+	85942032	85975514	A5SS	0.33	50	50	ENSMUST00000088931.10	ENSMUSG00000035900.19	Gramd4	chr15	protein_coding	GRAM domain containing 4
chr15	85959185	85975514	+	85943162	85975514	A5SS	0.33	50	50	ENSMUST00000138134.8	ENSMUSG00000035900.19	Gramd4	chr15	protein_coding	GRAM domain containing 4
chr15	86035810	86036606	-	86035810	86039175	A5SS	0.5	50	50	ENSMUST00000150767.8	ENSMUSG00000035891.17	Cerk	chr15	protein_coding	ceramide kinase
chr15	86123494;86139143	86138963;86176335	+	86123494	86176335	cassetteExon	0.5	100	100	ENSMUST00000063414.9	ENSMUSG00000051864.11	Tbc1d22a	chr15	protein_coding	TBC1 domain family, member 22a
chr15	86357917	86359056	-	86337983	86359056	A3SS	0.5	50	50	ENSMUST00000229286.2	ENSMUSG00000115918.2	A930001M01Rik	chr15	lncRNA	RIKEN cDNA A930001M01 gene
chr15	87509687	87565681	+	87428804	87565681	A5SS	0.5	50	50	ENSMUST00000230414.2	ENSMUSG00000054863.10	Tafa5	chr15	protein_coding	TAFA chemokine like family member 5
chr15	87851870	87872063	+	87852491	87872063	A5SS&ES	0.5	50	50	ENSMUST00000230713.2	ENSMUSG00000116061.2	Gm49472	chr15	lncRNA	predicted gene, 49472
chr15	88160068;88191791	88191631;88199661	-	88160068	88199661	cassetteExon	0.5	100	100	ENSMUST00000229875.2	ENSMUSG00000115880.2	4930445N06Rik	chr15	lncRNA	RIKEN cDNA 4930445N06 gene
chr15	88580877	88584976	-	88576087	88584976	A3SS	0.5	50	50	ENSMUST00000109381.9	ENSMUSG00000022387.18	Brd1	chr15	protein_coding	bromodomain containing 1
chr15	88585080	88591237	-	88585473	88591237	A3SS	0.5	50	50	ENSMUST00000109381.9	ENSMUSG00000022387.18	Brd1	chr15	protein_coding	bromodomain containing 1
chr15	88601265	88603178	-	88601265	88613527	A5SS	0.5	50	50	ENSMUST00000109381.9	ENSMUSG00000022387.18	Brd1	chr15	protein_coding	bromodomain containing 1
chr15	88639136	88654741	+	88639136	88663612	A3SS	0.5	50	50	ENSMUST00000041297.15	ENSMUSG00000034333.16	Zbed4	chr15	protein_coding	zinc finger, BED type containing 4
chr15	88690924	88698632	-	88690924	88695500	A5SS&ES	0.5	50	50	ENSMUST00000160222.2	ENSMUSG00000035845.18	Alg12	chr15	protein_coding	asparagine-linked glycosylation 12 (alpha-1,6-mannosyltransferase)
chr15	88698851	88699497	-	88698851	88699499	A5SS	0.5	50	50	ENSMUST00000160222.2	ENSMUSG00000035845.18	Alg12	chr15	protein_coding	asparagine-linked glycosylation 12 (alpha-1,6-mannosyltransferase)
chr15	88700457	88703171	-	88700457	88703461	A5SS	0.5	50	50	ENSMUST00000162183.8	ENSMUSG00000035845.18	Alg12	chr15	protein_coding	asparagine-linked glycosylation 12 (alpha-1,6-mannosyltransferase)
chr15	88775098	88798616	-	88775098	88775602	5pMXE	0.25	50	50	ENSMUST00000176618.2	ENSMUSG00000093394.2	Gm20621	chr15	lncRNA	predicted gene 20621
chr15	88775098	88775387	-	88775098	88775602	A5SS	0.25	50	50	ENSMUST00000176618.2	ENSMUSG00000093394.2	Gm20621	chr15	lncRNA	predicted gene 20621
chr15	88775098	88775585	-	88775098	88775602	A5SS	0.25	50	50	ENSMUST00000176618.2	ENSMUSG00000093394.2	Gm20621	chr15	lncRNA	predicted gene 20621
chr15	88775098	88798616	-	88775098	88775387	5pMXE	0.25	50	50	ENSMUST00000177166.2	ENSMUSG00000093394.2	Gm20621	chr15	lncRNA	predicted gene 20621
chr15	88775098	88775585	-	88775098	88775387	A5SS	0.25	50	50	ENSMUST00000177166.2	ENSMUSG00000093394.2	Gm20621	chr15	lncRNA	predicted gene 20621
chr15	88775098	88798616	-	88775098	88775585	5pMXE	0.25	50	50	ENSMUST00000176338.2	ENSMUSG00000093394.2	Gm20621	chr15	lncRNA	predicted gene 20621
chr15	88818166	88819161	-	88818161	88819161	A3SS	0.5	50	50	ENSMUST00000177180.8	ENSMUSG00000022388.15	Ttll8	chr15	protein_coding	tubulin tyrosine ligase-like family, member 8
chr15	88862218	88862719	-	88862200	88862719	A3SS	0.5	50	50	ENSMUST00000042594.13	ENSMUSG00000035805.14	Mlc1	chr15	protein_coding	megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human)
chr15	88905513	88906236	+	88905513	88906204	A3SS	0.5	50	50	ENSMUST00000146993.8	ENSMUSG00000015365.16	Mov10l1	chr15	protein_coding	Mov10 like RISC complex RNA helicase 1
chr15	88938805	88939019	+	88938833	88939019	A5SS	0.5	50	50	ENSMUST00000146993.8	ENSMUSG00000015365.16	Mov10l1	chr15	protein_coding	Mov10 like RISC complex RNA helicase 1
chr15	88944502	88951761	+	88944502	88951737	A3SS	0.5	50	50	ENSMUST00000161372.2	ENSMUSG00000058441.8	Panx2	chr15	protein_coding	pannexin 2
chr15	88955951	88959302	-	88955951	88958276	5pMXE	0.5	50	50	ENSMUST00000162579.8	ENSMUSG00000087331.9	1810021B22Rik	chr15	lncRNA	RIKEN cDNA 1810021B22 gene
chr15	88955921	88958276	-	88955951	88958276	A3SS	0.5	50	50	ENSMUST00000162579.8	ENSMUSG00000087331.9	1810021B22Rik	chr15	lncRNA	RIKEN cDNA 1810021B22 gene
chr15	88955921;88958401	88958276;88959302	-	88955921	88959302	cassetteExon	0.5	100	100	ENSMUST00000161483.8	ENSMUSG00000087331.9	1810021B22Rik	chr15	lncRNA	RIKEN cDNA 1810021B22 gene
chr15	88955951	88959302	-	88955921	88959302	A3SS	0.33	50	50	ENSMUST00000161483.8	ENSMUSG00000087331.9	1810021B22Rik	chr15	lncRNA	RIKEN cDNA 1810021B22 gene
chr15	88955951	88959302	-	88955951;88958401	88958276;88959302	ES	0.33	50	50	ENSMUST00000161735.8	ENSMUSG00000087331.9	1810021B22Rik	chr15	lncRNA	RIKEN cDNA 1810021B22 gene
chr15	88958401	88959817	-	88958401	88959302	5pMXE	0.5	50	50	ENSMUST00000161735.8	ENSMUSG00000087331.9	1810021B22Rik	chr15	lncRNA	RIKEN cDNA 1810021B22 gene
chr15	88955921	88959302	-	88958401	88959302	A3SS&ES	0.33	50	50	ENSMUST00000161735.8	ENSMUSG00000087331.9	1810021B22Rik	chr15	lncRNA	RIKEN cDNA 1810021B22 gene
chr15	88955921	88959302	-	88955921	88958276	A5SS&ES	0.5	50	50	ENSMUST00000150364.3	ENSMUSG00000087331.9	1810021B22Rik	chr15	lncRNA	RIKEN cDNA 1810021B22 gene
chr15	88960344	88965183	+	88959417	88965183	A5SS	0.33	50	50	ENSMUST00000168863.8	ENSMUSG00000015363.14	Trabd	chr15	protein_coding	TraB domain containing
chr15	88960901	88965183	+	88959417	88965183	A5SS	0.33	50	50	ENSMUST00000168863.8	ENSMUSG00000015363.14	Trabd	chr15	protein_coding	TraB domain containing
chr15	88965656	88966154	+	88965634	88966154	A5SS	0.5	50	50	ENSMUST00000168863.8	ENSMUSG00000015363.14	Trabd	chr15	protein_coding	TraB domain containing
chr15	88960901	88965183	+	88960344	88965183	A5SS	0.33	50	50	ENSMUST00000081702.12	ENSMUSG00000015363.14	Trabd	chr15	protein_coding	TraB domain containing
chr15	88969660	88969729	+	88969649	88969729	A5SS	0.5	50	50	ENSMUST00000081702.12	ENSMUSG00000015363.14	Trabd	chr15	protein_coding	TraB domain containing
chr15	88977110	88978340	+	88977052	88978340	A5SS	0.5	50	50	ENSMUST00000130700.8	ENSMUSG00000035757.18	Selenoo	chr15	protein_coding	selenoprotein O
chr15	88985250	88985356	-	88985282	88985356	A3SS	0.5	50	50	ENSMUST00000109353.9	ENSMUSG00000051786.16	Tubgcp6	chr15	protein_coding	tubulin, gamma complex associated protein 6
chr15	88986369	88986457	-	88986372	88986457	A3SS	0.5	50	50	ENSMUST00000109353.9	ENSMUSG00000051786.16	Tubgcp6	chr15	protein_coding	tubulin, gamma complex associated protein 6
chr15	88989051	88990275	-	88989075	88990275	A3SS	0.33	50	50	ENSMUST00000109353.9	ENSMUSG00000051786.16	Tubgcp6	chr15	protein_coding	tubulin, gamma complex associated protein 6
chr15	88989071	88990275	-	88989075	88990275	A3SS	0.33	50	50	ENSMUST00000109353.9	ENSMUSG00000051786.16	Tubgcp6	chr15	protein_coding	tubulin, gamma complex associated protein 6
chr15	88985488	88985572	-	88985488	88985565	A5SS	0.5	50	50	ENSMUST00000109353.9	ENSMUSG00000051786.16	Tubgcp6	chr15	protein_coding	tubulin, gamma complex associated protein 6
chr15	88989071	88990275	-	88989051	88990275	A3SS	0.33	50	50	ENSMUST00000041656.14	ENSMUSG00000051786.16	Tubgcp6	chr15	protein_coding	tubulin, gamma complex associated protein 6
chr15	89011198	89011589	-	89011198;89011421	89011353;89011589	ES	0.5	50	50	ENSMUST00000129398.8	ENSMUSG00000062906.13	Hdac10	chr15	protein_coding	histone deacetylase 10
chr15	89008194	89008378	-	89008204	89008378	A3SS	0.5	50	50	ENSMUST00000129398.8	ENSMUSG00000062906.13	Hdac10	chr15	protein_coding	histone deacetylase 10
chr15	89008631	89008735	-	89008456	89008735	A3SS	0.5	50	50	ENSMUST00000129398.8	ENSMUSG00000062906.13	Hdac10	chr15	protein_coding	histone deacetylase 10
chr15	89009002	89009700	-	89009599	89009700	A3SS&ES	0.5	50	50	ENSMUST00000129398.8	ENSMUSG00000062906.13	Hdac10	chr15	protein_coding	histone deacetylase 10
chr15	89010284	89010844	-	89010284	89010415	A5SS&ES	0.5	50	50	ENSMUST00000129398.8	ENSMUSG00000062906.13	Hdac10	chr15	protein_coding	histone deacetylase 10
chr15	89010640	89010844	-	89010640	89010833	A5SS	0.5	50	50	ENSMUST00000129398.8	ENSMUSG00000062906.13	Hdac10	chr15	protein_coding	histone deacetylase 10
chr15	89010284;89010640	89010415;89010844	-	89010284	89010844	cassetteExon	0.5	100	100	ENSMUST00000109347.2	ENSMUSG00000062906.13	Hdac10	chr15	protein_coding	histone deacetylase 10
chr15	89018929	89019630	-	89018929;89019373	89019326;89019630	ES	0.5	50	50	ENSMUST00000088827.8	ENSMUSG00000022610.11	Mapk12	chr15	protein_coding	mitogen-activated protein kinase 12
chr15	89018929;89019891	89019630;89021604	-	89018929;89019373	89019326;89021604	MXE	0.5	100	100	ENSMUST00000231014.2	ENSMUSG00000022610.11	Mapk12	chr15	protein_coding	mitogen-activated protein kinase 12
chr15	89019373;89019891	89019630;89021604	-	89019373	89021604	cassetteExon	0.5	100	100	ENSMUST00000231014.2	ENSMUSG00000022610.11	Mapk12	chr15	protein_coding	mitogen-activated protein kinase 12
chr15	89019373	89021604	-	89017353	89021604	A3SS	0.33	50	50	ENSMUST00000231056.2	ENSMUSG00000022610.11	Mapk12	chr15	protein_coding	mitogen-activated protein kinase 12
chr15	89019891	89021604	-	89017353	89021604	A3SS	0.33	50	50	ENSMUST00000231056.2	ENSMUSG00000022610.11	Mapk12	chr15	protein_coding	mitogen-activated protein kinase 12
chr15	89017353	89018815	-	89017353	89021604	A5SS	0.5	50	50	ENSMUST00000231056.2	ENSMUSG00000022610.11	Mapk12	chr15	protein_coding	mitogen-activated protein kinase 12
chr15	89031041	89031335	-	89031041	89033601	A5SS	0.5	50	50	ENSMUST00000230734.2	ENSMUSG00000053137.8	Mapk11	chr15	protein_coding	mitogen-activated protein kinase 11
chr15	89029435	89029578	-	89029378	89029578	A3SS	0.5	50	50	ENSMUST00000088823.5	ENSMUSG00000053137.8	Mapk11	chr15	protein_coding	mitogen-activated protein kinase 11
chr15	89070464	89070957	-	89070464;89070630	89070566;89070957	ES	0.5	50	50	ENSMUST00000078953.9	ENSMUSG00000015377.11	Dennd6b	chr15	protein_coding	DENN/MADD domain containing 6B
chr15	89075231;89077321	89077138;89080422	-	89075231	89080422	cassetteExon	0.5	100	100	ENSMUST00000078953.9	ENSMUSG00000015377.11	Dennd6b	chr15	protein_coding	DENN/MADD domain containing 6B
chr15	89071201	89071351	-	89071253	89071351	A3SS	0.5	50	50	ENSMUST00000078953.9	ENSMUSG00000015377.11	Dennd6b	chr15	protein_coding	DENN/MADD domain containing 6B
chr15	89070464	89070957	-	89070464	89070566	A5SS	0.5	50	50	ENSMUST00000229935.2	ENSMUSG00000015377.11	Dennd6b	chr15	protein_coding	DENN/MADD domain containing 6B
chr15	89126491;89130543	89130461;89137222	+	89126491	89137222	cassetteExon	0.5	100	100	ENSMUST00000227951.2	ENSMUSG00000036561.10	Ppp6r2	chr15	protein_coding	protein phosphatase 6, regulatory subunit 2
chr15	89126491	89127508	+	89126491	89137222	A3SS	0.33	50	50	ENSMUST00000227951.2	ENSMUSG00000036561.10	Ppp6r2	chr15	protein_coding	protein phosphatase 6, regulatory subunit 2
chr15	89126491	89130461	+	89126491;89127662	89127508;89130461	ES	0.5	50	50	ENSMUST00000226779.2	ENSMUSG00000036561.10	Ppp6r2	chr15	protein_coding	protein phosphatase 6, regulatory subunit 2
chr15	89162987	89163923	+	89162987;89163556	89163476;89163923	ES	0.5	50	50	ENSMUST00000238818.2	ENSMUSG00000036561.10	Ppp6r2	chr15	protein_coding	protein phosphatase 6, regulatory subunit 2
chr15	89179779;89180232	89180155;89183686	-	89179779	89183686	cassetteExon	0.5	100	100	ENSMUST00000123791.8	ENSMUSG00000036529.18	Sbf1	chr15	protein_coding	SET binding factor 1
chr15	89191138;89191398	89191375;89191696	-	89191138	89191696	cassetteExon	0.5	100	100	ENSMUST00000123791.8	ENSMUSG00000036529.18	Sbf1	chr15	protein_coding	SET binding factor 1
chr15	89172945	89173015	-	89172928	89173015	A3SS	0.5	50	50	ENSMUST00000123791.8	ENSMUSG00000036529.18	Sbf1	chr15	protein_coding	SET binding factor 1
chr15	89177833	89177942	-	89177869	89177942	A3SS	0.5	50	50	ENSMUST00000123791.8	ENSMUSG00000036529.18	Sbf1	chr15	protein_coding	SET binding factor 1
chr15	89186930	89187080	-	89186980	89187080	A3SS	0.5	50	50	ENSMUST00000123791.8	ENSMUSG00000036529.18	Sbf1	chr15	protein_coding	SET binding factor 1
chr15	89189671	89189747	-	89189675	89189747	A3SS	0.5	50	50	ENSMUST00000123791.8	ENSMUSG00000036529.18	Sbf1	chr15	protein_coding	SET binding factor 1
chr15	89219853	89220014	+	89219853	89220043	A3SS	0.5	50	50	ENSMUST00000023282.9	ENSMUSG00000022613.9	Miox	chr15	protein_coding	myo-inositol oxygenase
chr15	89220845	89220947	+	89220845	89220943	A3SS	0.5	50	50	ENSMUST00000023282.9	ENSMUSG00000022613.9	Miox	chr15	protein_coding	myo-inositol oxygenase
chr15	89239276	89239559	-	89239020	89239559	A3SS	0.5	50	50	ENSMUST00000023283.6	ENSMUSG00000022614.9	Lmf2	chr15	protein_coding	lipase maturation factor 2
chr15	89238500	89238659	-	89238500	89238630	A5SS	0.5	50	50	ENSMUST00000231107.2	ENSMUSG00000022614.9	Lmf2	chr15	protein_coding	lipase maturation factor 2
chr15	89254691	89254804	+	89254691	89254807	A3SS	0.5	50	50	ENSMUST00000036987.12	ENSMUSG00000008690.16	Ncaph2	chr15	protein_coding	non-SMC condensin II complex, subunit H2
chr15	89240129	89244559	+	89240053	89244559	A5SS	0.25	50	50	ENSMUST00000036987.12	ENSMUSG00000008690.16	Ncaph2	chr15	protein_coding	non-SMC condensin II complex, subunit H2
chr15	89240146	89244559	+	89240053	89244559	A5SS	0.25	50	50	ENSMUST00000036987.12	ENSMUSG00000008690.16	Ncaph2	chr15	protein_coding	non-SMC condensin II complex, subunit H2
chr15	89240147	89244559	+	89240053	89244559	A5SS	0.25	50	50	ENSMUST00000036987.12	ENSMUSG00000008690.16	Ncaph2	chr15	protein_coding	non-SMC condensin II complex, subunit H2
chr15	89254506	89254598	+	89254511	89254598	A5SS	0.5	50	50	ENSMUST00000036987.12	ENSMUSG00000008690.16	Ncaph2	chr15	protein_coding	non-SMC condensin II complex, subunit H2
chr15	89240129	89244559	+	89240146	89244559	A5SS	0.25	50	50	ENSMUST00000074552.12	ENSMUSG00000008690.16	Ncaph2	chr15	protein_coding	non-SMC condensin II complex, subunit H2
chr15	89240147	89244559	+	89240129	89244559	A5SS	0.25	50	50	ENSMUST00000145259.8	ENSMUSG00000008690.16	Ncaph2	chr15	protein_coding	non-SMC condensin II complex, subunit H2
chr15	89240146	89244559	+	89240147	89244559	A5SS	0.25	50	50	ENSMUST00000145793.2	ENSMUSG00000008690.16	Ncaph2	chr15	protein_coding	non-SMC condensin II complex, subunit H2
chr15	89263052	89263147	-	89263052	89263273	A5SS	0.33	50	50	ENSMUST00000049968.9	ENSMUSG00000047394.10	Odf3b	chr15	protein_coding	outer dense fiber of sperm tails 3B
chr15	89263052	89263415	-	89263052	89263273	A5SS	0.33	50	50	ENSMUST00000049968.9	ENSMUSG00000047394.10	Odf3b	chr15	protein_coding	outer dense fiber of sperm tails 3B
chr15	89263052	89263415	-	89263052	89263147	5pMXE	0.33	50	50	ENSMUST00000228005.2	ENSMUSG00000047394.10	Odf3b	chr15	protein_coding	outer dense fiber of sperm tails 3B
chr15	89281637	89294602	-	89281637	89294394	5pMXE	0.5	50	50	ENSMUST00000109314.9	ENSMUSG00000078938.10	Syce3	chr15	protein_coding	synaptonemal complex central element protein 3
chr15	89305743	89306492	-	89305743;89306412	89306328;89306492	ES	0.5	50	50	ENSMUST00000109313.9	ENSMUSG00000078937.9	Cpt1b	chr15	protein_coding	carnitine palmitoyltransferase 1b, muscle
chr15	89309550	89310691	-	89309550	89310001	5pMXE	0.5	50	50	ENSMUST00000109313.9	ENSMUSG00000078937.9	Cpt1b	chr15	protein_coding	carnitine palmitoyltransferase 1b, muscle
chr15	89304165	89304291	-	89304211	89304291	A3SS	0.5	50	50	ENSMUST00000109313.9	ENSMUSG00000078937.9	Cpt1b	chr15	protein_coding	carnitine palmitoyltransferase 1b, muscle
chr15	89311602	89311764	-	89311630	89311764	A3SS	0.5	50	50	ENSMUST00000052315.13	ENSMUSG00000116461.2	Gm44502	chr15	protein_coding	predicted readthrough transcript (NMD candidate), 44502
chr15	89312396	89312614	-	89312432	89312614	A3SS	0.5	50	50	ENSMUST00000052315.13	ENSMUSG00000116461.2	Gm44502	chr15	protein_coding	predicted readthrough transcript (NMD candidate), 44502
chr15	89311095	89311280	-	89311095	89311527	A5SS	0.5	50	50	ENSMUST00000052315.13	ENSMUSG00000116461.2	Gm44502	chr15	protein_coding	predicted readthrough transcript (NMD candidate), 44502
chr15	89312781	89312917	-	89312747	89312917	A3SS	0.5	50	50	ENSMUST00000023289.13	ENSMUSG00000022617.16	Chkb	chr15	protein_coding	choline kinase beta
chr15	89361850	89362073	+	89361878	89362073	A5SS	0.5	50	50	ENSMUST00000136218.2	ENSMUSG00000084915.3	C230037L18Rik	chr15	lncRNA	RIKEN cDNA C230037L18 gene
chr15	89417657	89427303	+	89417657;89422241	89422218;89427303	ES	0.33	50	50	ENSMUST00000109309.9	ENSMUSG00000022623.18	Shank3	chr15	protein_coding	SH3 and multiple ankyrin repeat domains 3
chr15	89428081	89441938	+	89428081;89434085	89431829;89441938	ES	0.33	50	50	ENSMUST00000109309.9	ENSMUSG00000022623.18	Shank3	chr15	protein_coding	SH3 and multiple ankyrin repeat domains 3
chr15	89434085;89440951	89440924;89441938	+	89434085	89441938	cassetteExon	0.5	100	100	ENSMUST00000109309.9	ENSMUSG00000022623.18	Shank3	chr15	protein_coding	SH3 and multiple ankyrin repeat domains 3
chr15	89417657	89418571	+	89417657	89422218	A3SS	0.33	50	50	ENSMUST00000109309.9	ENSMUSG00000022623.18	Shank3	chr15	protein_coding	SH3 and multiple ankyrin repeat domains 3
chr15	89408784	89409363	+	89408422	89409363	A5SS	0.5	50	50	ENSMUST00000109309.9	ENSMUSG00000022623.18	Shank3	chr15	protein_coding	SH3 and multiple ankyrin repeat domains 3
chr15	89417685	89427303	+	89422241	89427303	A5SS&ES	0.33	50	50	ENSMUST00000109309.9	ENSMUSG00000022623.18	Shank3	chr15	protein_coding	SH3 and multiple ankyrin repeat domains 3
chr15	89417657	89418571	+	89417657	89427303	A3SS	0.33	50	50	ENSMUST00000066545.14	ENSMUSG00000022623.18	Shank3	chr15	protein_coding	SH3 and multiple ankyrin repeat domains 3
chr15	89428081	89431829	+	89428081	89441938	A3SS	0.5	50	50	ENSMUST00000066545.14	ENSMUSG00000022623.18	Shank3	chr15	protein_coding	SH3 and multiple ankyrin repeat domains 3
chr15	89417685	89427303	+	89417657	89427303	A5SS	0.33	50	50	ENSMUST00000066545.14	ENSMUSG00000022623.18	Shank3	chr15	protein_coding	SH3 and multiple ankyrin repeat domains 3
chr15	89434085	89441938	+	89428081	89441938	A5SS	0.33	50	50	ENSMUST00000066545.14	ENSMUSG00000022623.18	Shank3	chr15	protein_coding	SH3 and multiple ankyrin repeat domains 3
chr15	89440951	89441938	+	89428081	89441938	A5SS	0.33	50	50	ENSMUST00000066545.14	ENSMUSG00000022623.18	Shank3	chr15	protein_coding	SH3 and multiple ankyrin repeat domains 3
chr15	89434085	89441938	+	89440951	89441938	5pMXE	0.33	50	50	ENSMUST00000238458.2	ENSMUSG00000022623.18	Shank3	chr15	protein_coding	SH3 and multiple ankyrin repeat domains 3
chr15	89452641	89453477	+	89452641	89453540	A3SS	0.33	50	50	ENSMUST00000023295.3	ENSMUSG00000022622.6	Acr	chr15	protein_coding	acrosin prepropeptide
chr15	89452641	89453666	+	89452641	89453540	A3SS	0.33	50	50	ENSMUST00000023295.3	ENSMUSG00000022622.6	Acr	chr15	protein_coding	acrosin prepropeptide
chr15	89457467	89458064	+	89457467	89458035	A3SS	0.5	50	50	ENSMUST00000023295.3	ENSMUSG00000022622.6	Acr	chr15	protein_coding	acrosin prepropeptide
chr15	89452637	89453540	+	89452641	89453540	A5SS	0.5	50	50	ENSMUST00000023295.3	ENSMUSG00000022622.6	Acr	chr15	protein_coding	acrosin prepropeptide
chr15	89452641	89453666	+	89452641	89453477	A3SS	0.33	50	50	ENSMUST00000231216.2	ENSMUSG00000022622.6	Acr	chr15	protein_coding	acrosin prepropeptide
chr15	89452641;89453580	89453477;89453666	+	89452641	89453666	cassetteExon	0.5	100	100	ENSMUST00000230538.2	ENSMUSG00000022622.6	Acr	chr15	protein_coding	acrosin prepropeptide
chr15	89452641;89453580	89453540;89453666	+	89452641	89453666	cassetteExon	0.5	100	100	ENSMUST00000230538.2	ENSMUSG00000022622.6	Acr	chr15	protein_coding	acrosin prepropeptide
chr15	89452641	89453666	+	89453580	89453666	A5SS&ES	0.5	50	50	ENSMUST00000230978.2	ENSMUSG00000022622.6	Acr	chr15	protein_coding	acrosin prepropeptide
chr15	89467633	89468113	-	89467633;89467885	89467802;89468113	ES	0.5	50	50	ENSMUST00000023294.15	ENSMUSG00000022621.17	Rabl2	chr15	protein_coding	RAB, member RAS oncogene family-like 2
chr15	89468210	89470462	-	89468210;89468593	89468482;89470462	ES	0.5	50	50	ENSMUST00000023294.15	ENSMUSG00000022621.17	Rabl2	chr15	protein_coding	RAB, member RAS oncogene family-like 2
chr15	89468593	89471117	-	89468593;89470541	89470462;89471117	ES	0.5	50	50	ENSMUST00000023294.15	ENSMUSG00000022621.17	Rabl2	chr15	protein_coding	RAB, member RAS oncogene family-like 2
chr15	89468210	89468547	-	89468210	89468482	A5SS	0.25	50	50	ENSMUST00000023294.15	ENSMUSG00000022621.17	Rabl2	chr15	protein_coding	RAB, member RAS oncogene family-like 2
chr15	89468210	89474476	-	89468210;89468593	89468547;89474476	ES	0.25	50	50	ENSMUST00000094056.12	ENSMUSG00000022621.17	Rabl2	chr15	protein_coding	RAB, member RAS oncogene family-like 2
chr15	89468210;89470541	89470462;89474476	-	89468210;89468593	89468547;89474476	MXE	0.5	100	100	ENSMUST00000094056.12	ENSMUSG00000022621.17	Rabl2	chr15	protein_coding	RAB, member RAS oncogene family-like 2
chr15	89468593;89470541	89470462;89474476	-	89468593	89474476	cassetteExon	0.5	100	100	ENSMUST00000094056.12	ENSMUSG00000022621.17	Rabl2	chr15	protein_coding	RAB, member RAS oncogene family-like 2
chr15	89472420	89474476	-	89468593	89474476	A3SS	0.25	50	50	ENSMUST00000094056.12	ENSMUSG00000022621.17	Rabl2	chr15	protein_coding	RAB, member RAS oncogene family-like 2
chr15	89468593	89471117	-	89468593	89474476	A5SS	0.33	50	50	ENSMUST00000094056.12	ENSMUSG00000022621.17	Rabl2	chr15	protein_coding	RAB, member RAS oncogene family-like 2
chr15	89468210	89470462	-	89468593	89470462	A3SS	0.5	50	50	ENSMUST00000165747.8	ENSMUSG00000022621.17	Rabl2	chr15	protein_coding	RAB, member RAS oncogene family-like 2
chr15	89468210	89474476	-	89472420	89474476	A3SS&ES	0.25	50	50	ENSMUST00000165747.8	ENSMUSG00000022621.17	Rabl2	chr15	protein_coding	RAB, member RAS oncogene family-like 2
chr15	89468210;89468593	89468547;89470462	-	89468210	89470462	cassetteExon	0.5	100	100	ENSMUST00000172053.8	ENSMUSG00000022621.17	Rabl2	chr15	protein_coding	RAB, member RAS oncogene family-like 2
chr15	89468210;89468593	89468482;89471117	-	89468210;89470541	89470462;89471117	MXE	0.5	100	100	ENSMUST00000172053.8	ENSMUSG00000022621.17	Rabl2	chr15	protein_coding	RAB, member RAS oncogene family-like 2
chr15	89468210;89468593	89468547;89471117	-	89468210;89470541	89470462;89471117	MXE	0.5	100	100	ENSMUST00000172053.8	ENSMUSG00000022621.17	Rabl2	chr15	protein_coding	RAB, member RAS oncogene family-like 2
chr15	89468210;89468593	89468482;89474476	-	89468210;89472420	89470462;89474476	MXE	0.5	100	100	ENSMUST00000172053.8	ENSMUSG00000022621.17	Rabl2	chr15	protein_coding	RAB, member RAS oncogene family-like 2
chr15	89468210;89468593	89468547;89474476	-	89468210;89472420	89470462;89474476	MXE	0.5	100	100	ENSMUST00000172053.8	ENSMUSG00000022621.17	Rabl2	chr15	protein_coding	RAB, member RAS oncogene family-like 2
chr15	89468210;89468593	89468482;89474476	-	89468210	89474476	cassetteExon	0.5	100	100	ENSMUST00000169466.8	ENSMUSG00000022621.17	Rabl2	chr15	protein_coding	RAB, member RAS oncogene family-like 2
chr15	89468210;89470541	89470462;89474476	-	89468210	89474476	cassetteExon	0.5	100	100	ENSMUST00000169466.8	ENSMUSG00000022621.17	Rabl2	chr15	protein_coding	RAB, member RAS oncogene family-like 2
chr15	89468210	89474476	-	89470541	89474476	A3SS&ES	0.25	50	50	ENSMUST00000171580.8	ENSMUSG00000022621.17	Rabl2	chr15	protein_coding	RAB, member RAS oncogene family-like 2
chr15	89472420	89474476	-	89470541	89474476	A3SS	0.25	50	50	ENSMUST00000171580.8	ENSMUSG00000022621.17	Rabl2	chr15	protein_coding	RAB, member RAS oncogene family-like 2
chr15	89468593	89471117	-	89468593	89470462	A5SS&ES	0.33	50	50	ENSMUST00000171580.8	ENSMUSG00000022621.17	Rabl2	chr15	protein_coding	RAB, member RAS oncogene family-like 2
chr15	89470541	89471117	-	89470541	89474476	A5SS	0.5	50	50	ENSMUST00000171580.8	ENSMUSG00000022621.17	Rabl2	chr15	protein_coding	RAB, member RAS oncogene family-like 2
chr15	89468210	89470462	-	89468210	89468482	5pMXE	0.25	50	50	ENSMUST00000171826.2	ENSMUSG00000022621.17	Rabl2	chr15	protein_coding	RAB, member RAS oncogene family-like 2
chr15	89468210	89474476	-	89468210	89468482	5pMXE	0.25	50	50	ENSMUST00000171826.2	ENSMUSG00000022621.17	Rabl2	chr15	protein_coding	RAB, member RAS oncogene family-like 2
chr15	89467633	89468113	-	89467885	89468113	3pMXE	0.5	50	50	ENSMUST00000170126.2	ENSMUSG00000022621.17	Rabl2	chr15	protein_coding	RAB, member RAS oncogene family-like 2
chr15	89468593;89470541	89470462;89474476	-	89468593;89472420	89471117;89474476	MXE	0.5	100	100	ENSMUST00000170126.2	ENSMUSG00000022621.17	Rabl2	chr15	protein_coding	RAB, member RAS oncogene family-like 2
chr15	90110057	90111676	+	90110057	90111527	A3SS	0.5	50	50	ENSMUST00000100309.3	ENSMUSG00000075470.3	Alg10b	chr15	protein_coding	asparagine-linked glycosylation 10B (alpha-1,2-glucosyltransferase)
chr15	90469144;90486092	90486016;90499314	-	90469144	90499314	cassetteExon	0.5	100	100	ENSMUST00000088649.11	ENSMUSG00000052560.16	Cpne8	chr15	protein_coding	copine VIII
chr15	90527916	90532781	-	90503938	90532781	A3SS	0.5	50	50	ENSMUST00000088649.11	ENSMUSG00000052560.16	Cpne8	chr15	protein_coding	copine VIII
chr15	90533486	90533578	-	90533486	90563371	A5SS	0.5	50	50	ENSMUST00000088649.11	ENSMUSG00000052560.16	Cpne8	chr15	protein_coding	copine VIII
chr15	90803746	90804648	+	90803746;90804245	90804213;90804648	ES	0.5	50	50	ENSMUST00000230674.2	ENSMUSG00000116428.2	Gm36618	chr15	lncRNA	predicted gene, 36618
chr15	90804701	90806709	+	90804701	90805090	3pMXE	0.5	50	50	ENSMUST00000230674.2	ENSMUSG00000116428.2	Gm36618	chr15	lncRNA	predicted gene, 36618
chr15	90791655	90800209	+	90791655	90800194	A3SS	0.5	50	50	ENSMUST00000230674.2	ENSMUSG00000116428.2	Gm36618	chr15	lncRNA	predicted gene, 36618
chr15	90800444	90801645	+	90800424	90801645	A5SS	0.5	50	50	ENSMUST00000230674.2	ENSMUSG00000116428.2	Gm36618	chr15	lncRNA	predicted gene, 36618
chr15	90828104	90840498	-	90828104;90833247	90833209;90840498	ES	0.25	50	50	ENSMUST00000109288.9	ENSMUSG00000022629.18	Kif21a	chr15	protein_coding	kinesin family member 21A
chr15	90828104;90832541	90832527;90833209	-	90828104	90833209	cassetteExon	0.5	100	100	ENSMUST00000109288.9	ENSMUSG00000022629.18	Kif21a	chr15	protein_coding	kinesin family member 21A
chr15	90828104;90835577	90835449;90840498	-	90828104;90833247	90833209;90840498	MXE	0.5	100	100	ENSMUST00000109288.9	ENSMUSG00000022629.18	Kif21a	chr15	protein_coding	kinesin family member 21A
chr15	90833247;90835577	90835449;90840498	-	90833247	90840498	cassetteExon	0.5	100	100	ENSMUST00000109288.9	ENSMUSG00000022629.18	Kif21a	chr15	protein_coding	kinesin family member 21A
chr15	90843951;90844075	90844055;90849670	-	90843951	90849670	cassetteExon	0.5	100	100	ENSMUST00000109288.9	ENSMUSG00000022629.18	Kif21a	chr15	protein_coding	kinesin family member 21A
chr15	90843951;90849198	90849178;90849670	-	90843951	90849670	cassetteExon	0.5	100	100	ENSMUST00000109288.9	ENSMUSG00000022629.18	Kif21a	chr15	protein_coding	kinesin family member 21A
chr15	90856918;90860712	90860674;90864998	-	90856918	90864998	cassetteExon	0.5	100	100	ENSMUST00000109288.9	ENSMUSG00000022629.18	Kif21a	chr15	protein_coding	kinesin family member 21A
chr15	90837021	90840498	-	90833247	90840498	A3SS	0.25	50	50	ENSMUST00000109288.9	ENSMUSG00000022629.18	Kif21a	chr15	protein_coding	kinesin family member 21A
chr15	90828104	90835449	-	90828104;90833247	90833209;90835449	ES	0.5	50	50	ENSMUST00000100304.11	ENSMUSG00000022629.18	Kif21a	chr15	protein_coding	kinesin family member 21A
chr15	90835577	90840498	-	90835577;90837021	90836914;90840498	ES	0.25	50	50	ENSMUST00000100304.11	ENSMUSG00000022629.18	Kif21a	chr15	protein_coding	kinesin family member 21A
chr15	90843951;90849198	90849178;90849670	-	90843951;90844075	90844055;90849670	MXE	0.5	100	100	ENSMUST00000100304.11	ENSMUSG00000022629.18	Kif21a	chr15	protein_coding	kinesin family member 21A
chr15	90828104;90835577	90835449;90840498	-	90828104	90840498	cassetteExon	0.5	100	100	ENSMUST00000109287.4	ENSMUSG00000022629.18	Kif21a	chr15	protein_coding	kinesin family member 21A
chr15	90837021	90840498	-	90828104	90840498	A3SS	0.25	50	50	ENSMUST00000109287.4	ENSMUSG00000022629.18	Kif21a	chr15	protein_coding	kinesin family member 21A
chr15	90828104	90832527	-	90828104	90840498	A5SS	0.25	50	50	ENSMUST00000109287.4	ENSMUSG00000022629.18	Kif21a	chr15	protein_coding	kinesin family member 21A
chr15	90828104	90840498	-	90828104	90835449	5pMXE	0.25	50	50	ENSMUST00000230487.2	ENSMUSG00000022629.18	Kif21a	chr15	protein_coding	kinesin family member 21A
chr15	90828104	90832527	-	90828104	90835449	A5SS	0.25	50	50	ENSMUST00000230487.2	ENSMUSG00000022629.18	Kif21a	chr15	protein_coding	kinesin family member 21A
chr15	91047402	91056293	-	91047402	91058794	A5SS	0.5	50	50	ENSMUST00000069511.8	ENSMUSG00000055782.10	Abcd2	chr15	protein_coding	ATP-binding cassette, sub-family D (ALD), member 2
chr15	91281404	91296312	-	91234333	91296312	A3SS	0.5	50	50	ENSMUST00000109283.2	ENSMUSG00000036298.11	Slc2a13	chr15	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 13
chr15	91429674	91456778	-	91400697	91456778	A3SS	0.5	50	50	ENSMUST00000109283.2	ENSMUSG00000036298.11	Slc2a13	chr15	protein_coding	solute carrier family 2 (facilitated glucose transporter), member 13
chr15	91671329	91672652	+	91671329	91680200	A3SS	0.5	50	50	ENSMUST00000060642.7	ENSMUSG00000036273.16	Lrrk2	chr15	protein_coding	leucine-rich repeat kinase 2
chr15	91656580	91657025	+	91651662	91657025	A5SS	0.5	50	50	ENSMUST00000060642.7	ENSMUSG00000036273.16	Lrrk2	chr15	protein_coding	leucine-rich repeat kinase 2
chr15	91664656	91671169	+	91664212	91671169	A5SS	0.5	50	50	ENSMUST00000060642.7	ENSMUSG00000036273.16	Lrrk2	chr15	protein_coding	leucine-rich repeat kinase 2
chr15	91722623;91740841	91740755;91744468	+	91722623	91744468	cassetteExon	0.5	100	100	ENSMUST00000109277.8	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91722623	91725535	+	91722623	91744468	A3SS	0.2	50	50	ENSMUST00000109277.8	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91722623	91726102	+	91722623	91744468	A3SS	0.2	50	50	ENSMUST00000109277.8	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91722623	91729649	+	91722623	91744468	A3SS	0.2	50	50	ENSMUST00000109277.8	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91732288	91744468	+	91722623	91744468	A5SS	0.25	50	50	ENSMUST00000109277.8	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91744007	91744468	+	91722623	91744468	A5SS	0.25	50	50	ENSMUST00000109277.8	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91744632	91744745	+	91744647	91744745	A5SS	0.5	50	50	ENSMUST00000109277.8	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91722623	91726102	+	91722623;91725666	91725535;91726102	ES	0.5	50	50	ENSMUST00000123935.8	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91722623	91725535	+	91722623	91740755	A3SS	0.2	50	50	ENSMUST00000109276.8	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91722623	91726102	+	91722623	91740755	A3SS	0.2	50	50	ENSMUST00000109276.8	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91722623	91729649	+	91722623	91740755	A3SS	0.2	50	50	ENSMUST00000109276.8	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91740841	91742822	+	91740841	91744468	A3SS	0.5	50	50	ENSMUST00000109276.8	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91732288	91744468	+	91740841	91744468	A5SS&ES	0.25	50	50	ENSMUST00000109276.8	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91735802	91740755	+	91722623	91740755	A5SS	0.25	50	50	ENSMUST00000109276.8	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91736835	91740755	+	91722623	91740755	A5SS	0.25	50	50	ENSMUST00000109276.8	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91738853	91740755	+	91722623	91740755	A5SS	0.25	50	50	ENSMUST00000109276.8	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91744007	91744468	+	91740841	91744468	A5SS	0.25	50	50	ENSMUST00000109276.8	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91736835	91740755	+	91736835;91738853	91738755;91740755	ES	0.25	50	50	ENSMUST00000088555.10	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91735802	91740755	+	91735802;91736835	91736746;91740755	ES	0.25	50	50	ENSMUST00000100293.9	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91731347;91738853	91738755;91740755	+	91731347;91736835	91732118;91740755	MXE	0.5	100	100	ENSMUST00000100293.9	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91733321;91738853	91738755;91740755	+	91733321;91736835	91734763;91740755	MXE	0.5	100	100	ENSMUST00000100293.9	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91722623	91725535	+	91722623	91729649	A3SS	0.25	50	50	ENSMUST00000143271.2	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91722623	91726102	+	91722623	91729649	A3SS	0.25	50	50	ENSMUST00000143271.2	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91729738	91731249	+	91729738	91734763	A3SS	0.5	50	50	ENSMUST00000143271.2	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91728724	91729649	+	91722623	91729649	A5SS	0.5	50	50	ENSMUST00000143271.2	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91733321	91734763	+	91729738	91734763	A5SS	0.5	50	50	ENSMUST00000143271.2	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91738853	91740755	+	91735802	91740755	A5SS	0.25	50	50	ENSMUST00000143271.2	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91722623	91726102	+	91725666	91726102	5pMXE	0.5	50	50	ENSMUST00000130014.8	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91731347	91738755	+	91731347	91732118	A3SS&ES	0.5	50	50	ENSMUST00000130014.8	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91732288	91733232	+	91732288	91744468	A3SS	0.5	50	50	ENSMUST00000130014.8	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91744007	91744468	+	91732288	91744468	A5SS	0.33	50	50	ENSMUST00000130014.8	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91731347;91732288	91732118;91744468	+	91731347;91744007	91738755;91744468	MXE	0.5	100	100	ENSMUST00000136172.8	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91733321	91738755	+	91731347	91738755	A5SS	0.33	50	50	ENSMUST00000136172.8	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91736835	91738755	+	91731347	91738755	A5SS	0.33	50	50	ENSMUST00000136172.8	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91736835	91740755	+	91738853	91740755	A5SS&ES	0.33	50	50	ENSMUST00000136172.8	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91733321	91734763	+	91733321	91738755	A3SS	0.5	50	50	ENSMUST00000132674.2	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91736835	91738755	+	91733321	91738755	A5SS	0.5	50	50	ENSMUST00000132674.2	ENSMUSG00000047295.17	Smgc	chr15	protein_coding	submandibular gland protein C
chr15	91722623	91725535	+	91722623	91754670	A3SS	0.16	50	50	ENSMUST00000239545.1	ENSMUSG00000118670.1	Muc19	chr15	protein_coding	--
chr15	91722623	91726102	+	91722623	91754670	A3SS	0.16	50	50	ENSMUST00000239545.1	ENSMUSG00000118670.1	Muc19	chr15	protein_coding	--
chr15	91722623	91729649	+	91722623	91754670	A3SS	0.16	50	50	ENSMUST00000239545.1	ENSMUSG00000118670.1	Muc19	chr15	protein_coding	--
chr15	91722623	91740755	+	91722623	91754670	A3SS	0.16	50	50	ENSMUST00000239545.1	ENSMUSG00000118670.1	Muc19	chr15	protein_coding	--
chr15	91722623	91744468	+	91722623	91754670	A3SS	0.16	50	50	ENSMUST00000239545.1	ENSMUSG00000118670.1	Muc19	chr15	protein_coding	--
chr15	92026216	92114197	+	91949204	92114197	A5SS	0.33	50	50	ENSMUST00000141187.8	ENSMUSG00000055022.15	Cntn1	chr15	protein_coding	contactin 1
chr15	92059542	92114197	+	91949204	92114197	A5SS	0.33	50	50	ENSMUST00000141187.8	ENSMUSG00000055022.15	Cntn1	chr15	protein_coding	contactin 1
chr15	92059542	92114197	+	92026216	92114197	A5SS	0.33	50	50	ENSMUST00000000109.11	ENSMUSG00000055022.15	Cntn1	chr15	protein_coding	contactin 1
chr15	92384603	92575382	+	92299917	92575382	A5SS	0.33	50	50	ENSMUST00000169942.10	ENSMUSG00000036218.17	Pdzrn4	chr15	protein_coding	PDZ domain containing RING finger 4
chr15	92495317	92575382	+	92299917	92575382	A5SS	0.33	50	50	ENSMUST00000169942.10	ENSMUSG00000036218.17	Pdzrn4	chr15	protein_coding	PDZ domain containing RING finger 4
chr15	92495317	92575382	+	92384603	92575382	A5SS	0.33	50	50	ENSMUST00000229173.2	ENSMUSG00000036218.17	Pdzrn4	chr15	protein_coding	PDZ domain containing RING finger 4
chr15	93143010	93145740	-	93143010;93143573	93143484;93145740	ES	0.5	50	50	ENSMUST00000049484.13	ENSMUSG00000036197.17	Gxylt1	chr15	protein_coding	glucoside xylosyltransferase 1
chr15	93159799;93163844	93163752;93172757	-	93159799	93172757	cassetteExon	0.5	100	100	ENSMUST00000049484.13	ENSMUSG00000036197.17	Gxylt1	chr15	protein_coding	glucoside xylosyltransferase 1
chr15	93184443;93215489	93215420;93234221	-	93184443	93234221	cassetteExon	0.5	100	100	ENSMUST00000080299.7	ENSMUSG00000022634.10	Yaf2	chr15	protein_coding	YY1 associated factor 2
chr15	93289446;93291645	93291588;93293468	-	93289446	93293468	cassetteExon	0.5	100	100	ENSMUST00000162160.8	ENSMUSG00000022635.10	Zcrb1	chr15	protein_coding	zinc finger CCHC-type and RNA binding motif 1
chr15	93284167	93285458	-	93284164	93285458	A3SS	0.5	50	50	ENSMUST00000162160.8	ENSMUSG00000022635.10	Zcrb1	chr15	protein_coding	zinc finger CCHC-type and RNA binding motif 1
chr15	93308664;93318371	93318165;93321895	+	93308664	93321895	cassetteExon	0.5	100	100	ENSMUST00000109256.11	ENSMUSG00000036167.17	Pphln1	chr15	protein_coding	periphilin 1
chr15	93339593;93350054	93349998;93353332	+	93339593	93353332	cassetteExon	0.5	100	100	ENSMUST00000109256.11	ENSMUSG00000036167.17	Pphln1	chr15	protein_coding	periphilin 1
chr15	93296342	93308553	+	93296342	93308573	A3SS	0.5	50	50	ENSMUST00000109256.11	ENSMUSG00000036167.17	Pphln1	chr15	protein_coding	periphilin 1
chr15	93339593	93342555	+	93339593	93353332	A3SS	0.33	50	50	ENSMUST00000109256.11	ENSMUSG00000036167.17	Pphln1	chr15	protein_coding	periphilin 1
chr15	93296585	93308573	+	93296342	93308573	A5SS	0.33	50	50	ENSMUST00000109256.11	ENSMUSG00000036167.17	Pphln1	chr15	protein_coding	periphilin 1
chr15	93297374	93308573	+	93296342	93308573	A5SS	0.33	50	50	ENSMUST00000109256.11	ENSMUSG00000036167.17	Pphln1	chr15	protein_coding	periphilin 1
chr15	93330854	93339382	+	93321956	93339382	A5SS	0.5	50	50	ENSMUST00000109256.11	ENSMUSG00000036167.17	Pphln1	chr15	protein_coding	periphilin 1
chr15	93339593	93342555	+	93339593	93349998	A3SS	0.33	50	50	ENSMUST00000049122.16	ENSMUSG00000036167.17	Pphln1	chr15	protein_coding	periphilin 1
chr15	93297374	93308573	+	93296585	93308573	A5SS	0.33	50	50	ENSMUST00000165935.2	ENSMUSG00000036167.17	Pphln1	chr15	protein_coding	periphilin 1
chr15	93308664	93321895	+	93308664	93318165	3pMXE	0.5	50	50	ENSMUST00000230385.2	ENSMUSG00000036167.17	Pphln1	chr15	protein_coding	periphilin 1
chr15	94301431	94316007	-	94301431	94301880	5pMXE	0.5	50	50	ENSMUST00000035342.11	ENSMUSG00000022449.15	Adamts20	chr15	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20
chr15	94438855;94439847	94439752;94441341	-	94438855	94441341	cassetteExon	0.5	100	100	ENSMUST00000049151.4	ENSMUSG00000033356.4	Pus7l	chr15	protein_coding	pseudouridylate synthase 7-like
chr15	94464778	94477769	+	94464778	94464895	3pMXE	0.5	50	50	ENSMUST00000074936.10	ENSMUSG00000059883.17	Irak4	chr15	protein_coding	interleukin-1 receptor-associated kinase 4
chr15	94484417	94487633	-	94484417;94486186	94486109;94487633	ES	0.5	50	50	ENSMUST00000023087.13	ENSMUSG00000022451.13	Twf1	chr15	protein_coding	twinfilin actin binding protein 1
chr15	94479205	94480631	-	94479248	94480631	A3SS	0.5	50	50	ENSMUST00000023087.13	ENSMUSG00000022451.13	Twf1	chr15	protein_coding	twinfilin actin binding protein 1
chr15	95100372	95126965	-	94973747	95126965	A3SS	0.33	50	50	ENSMUST00000229933.2	ENSMUSG00000022454.18	Nell2	chr15	protein_coding	NEL-like 2
chr15	95118035	95126965	-	94973747	95126965	A3SS	0.33	50	50	ENSMUST00000229933.2	ENSMUSG00000022454.18	Nell2	chr15	protein_coding	NEL-like 2
chr15	95425767	95426112	-	95425767	95426357	A5SS	0.5	50	50	ENSMUST00000229933.2	ENSMUSG00000022454.18	Nell2	chr15	protein_coding	NEL-like 2
chr15	95118035	95126965	-	95100372	95126965	A3SS	0.5	50	50	ENSMUST00000229981.2	ENSMUSG00000022454.18	Nell2	chr15	protein_coding	NEL-like 2
chr15	95046875	95047040	-	95046875	95046949	A5SS	0.5	50	50	ENSMUST00000189291.7	ENSMUSG00000100603.7	1700129L04Rik	chr15	lncRNA	RIKEN cDNA 1700129L04 gene
chr15	95530346	95530701	-	95530346	95538520	A5SS	0.5	50	50	ENSMUST00000054244.7	ENSMUSG00000045608.8	Dbx2	chr15	protein_coding	developing brain homeobox 2
chr15	95688937;95728587	95728525;95762106	+	95688937	95762106	cassetteExon	0.5	100	100	ENSMUST00000071874.8	ENSMUSG00000064210.8	Ano6	chr15	protein_coding	anoctamin 6
chr15	95839233;95841064	95840843;95841279	+	95839233	95841279	cassetteExon	0.5	100	100	ENSMUST00000071874.8	ENSMUSG00000064210.8	Ano6	chr15	protein_coding	anoctamin 6
chr15	95688937	95707406	+	95688937	95762106	A3SS	0.33	50	50	ENSMUST00000071874.8	ENSMUSG00000064210.8	Ano6	chr15	protein_coding	anoctamin 6
chr15	95698686	95762106	+	95688937	95762106	A5SS	0.33	50	50	ENSMUST00000071874.8	ENSMUSG00000064210.8	Ano6	chr15	protein_coding	anoctamin 6
chr15	95688937	95728525	+	95688937	95707406	3pMXE	0.33	50	50	ENSMUST00000226936.2	ENSMUSG00000064210.8	Ano6	chr15	protein_coding	anoctamin 6
chr15	95698686	95762106	+	95728587	95762106	A5SS&ES	0.33	50	50	ENSMUST00000227791.2	ENSMUSG00000064210.8	Ano6	chr15	protein_coding	anoctamin 6
chr15	95688937	95762106	+	95688937	95728525	3pMXE	0.33	50	50	ENSMUST00000226682.2	ENSMUSG00000064210.8	Ano6	chr15	protein_coding	anoctamin 6
chr15	95950900	95973910	-	95950900	95952618	5pMXE	0.5	50	50	ENSMUST00000230782.2	ENSMUSG00000078925.12	D030018L15Rik	chr15	lncRNA	RIKEN cDNA D030018L15 gene
chr15	95976117	95977225	-	95976015	95977225	A3SS	0.5	50	50	ENSMUST00000139808.8	ENSMUSG00000078925.12	D030018L15Rik	chr15	lncRNA	RIKEN cDNA D030018L15 gene
chr15	96148956	96151745	-	96130755	96151745	A3SS	0.5	50	50	ENSMUST00000181747.8	ENSMUSG00000097619.9	4833422M21Rik	chr15	lncRNA	RIKEN cDNA 4833422M21 gene
chr15	96130755	96138251	-	96130755	96151745	A5SS	0.5	50	50	ENSMUST00000181747.8	ENSMUSG00000097619.9	4833422M21Rik	chr15	lncRNA	RIKEN cDNA 4833422M21 gene
chr15	96248007	96254574	+	96248007	96249706	3pMXE	0.5	50	50	ENSMUST00000134985.9	ENSMUSG00000033237.20	Arid2	chr15	protein_coding	AT rich interactive domain 2 (ARID, RFX-like)
chr15	96313032	96313658	-	96313032	96313610	A5SS	0.5	50	50	ENSMUST00000228072.2	ENSMUSG00000033228.9	Scaf11	chr15	protein_coding	SR-related CTD-associated factor 11
chr15	96330305	96341826	-	96330305;96332878	96332801;96341826	ES	0.33	50	50	ENSMUST00000047835.8	ENSMUSG00000033228.9	Scaf11	chr15	protein_coding	SR-related CTD-associated factor 11
chr15	96313030	96313658	-	96313032	96313658	A3SS	0.5	50	50	ENSMUST00000047835.8	ENSMUSG00000033228.9	Scaf11	chr15	protein_coding	SR-related CTD-associated factor 11
chr15	96336231	96341826	-	96332878	96341826	A3SS	0.33	50	50	ENSMUST00000047835.8	ENSMUSG00000033228.9	Scaf11	chr15	protein_coding	SR-related CTD-associated factor 11
chr15	96350020	96358483	-	96344472	96358483	A3SS	0.5	50	50	ENSMUST00000047835.8	ENSMUSG00000033228.9	Scaf11	chr15	protein_coding	SR-related CTD-associated factor 11
chr15	96336231	96341826	-	96330305	96341826	A3SS	0.33	50	50	ENSMUST00000228535.2	ENSMUSG00000033228.9	Scaf11	chr15	protein_coding	SR-related CTD-associated factor 11
chr15	96522050	96540372	-	96522050	96540009	5pMXE	0.33	50	50	ENSMUST00000088454.13	ENSMUSG00000023169.16	Slc38a1	chr15	protein_coding	solute carrier family 38, member 1
chr15	96522050	96538935	-	96522050	96540009	A5SS	0.33	50	50	ENSMUST00000088454.13	ENSMUSG00000023169.16	Slc38a1	chr15	protein_coding	solute carrier family 38, member 1
chr15	96522050	96538935	-	96522050	96540372	A5SS	0.33	50	50	ENSMUST00000088452.11	ENSMUSG00000023169.16	Slc38a1	chr15	protein_coding	solute carrier family 38, member 1
chr15	96917742	96918184	-	96917742	96953736	A5SS	0.25	50	50	ENSMUST00000023101.10	ENSMUSG00000022464.15	Slc38a4	chr15	protein_coding	solute carrier family 38, member 4
chr15	96917742	96929015	-	96917742	96953736	A5SS	0.25	50	50	ENSMUST00000023101.10	ENSMUSG00000022464.15	Slc38a4	chr15	protein_coding	solute carrier family 38, member 4
chr15	96917742	96947831	-	96917742	96953736	A5SS	0.25	50	50	ENSMUST00000023101.10	ENSMUSG00000022464.15	Slc38a4	chr15	protein_coding	solute carrier family 38, member 4
chr15	96917742	96929015	-	96917742	96918184	5pMXE	0.25	50	50	ENSMUST00000166223.2	ENSMUSG00000022464.15	Slc38a4	chr15	protein_coding	solute carrier family 38, member 4
chr15	96917742	96947831	-	96917742	96918184	5pMXE	0.25	50	50	ENSMUST00000166223.2	ENSMUSG00000022464.15	Slc38a4	chr15	protein_coding	solute carrier family 38, member 4
chr15	96917742	96947831	-	96917742	96929015	5pMXE	0.25	50	50	ENSMUST00000230086.2	ENSMUSG00000022464.15	Slc38a4	chr15	protein_coding	solute carrier family 38, member 4
chr15	97059276;97059963	97059836;97064384	-	97059276	97064384	cassetteExon	0.5	100	100	ENSMUST00000229245.2	ENSMUSG00000116295.2	Gm32885	chr15	lncRNA	predicted gene, 32885
chr15	97064056	97064384	-	97059276	97064384	A3SS	0.33	50	50	ENSMUST00000229245.2	ENSMUSG00000116295.2	Gm32885	chr15	lncRNA	predicted gene, 32885
chr15	97064491	97065058	-	97064507	97065058	A3SS	0.5	50	50	ENSMUST00000229245.2	ENSMUSG00000116295.2	Gm32885	chr15	lncRNA	predicted gene, 32885
chr15	97064056	97064384	-	97059963	97064384	A3SS	0.33	50	50	ENSMUST00000229999.2	ENSMUSG00000116295.2	Gm32885	chr15	lncRNA	predicted gene, 32885
chr15	97259216	97281909	+	97259216;97272030	97271837;97281909	ES	0.5	50	50	ENSMUST00000059433.8	ENSMUSG00000044250.9	Pced1b	chr15	protein_coding	PC-esterase domain containing 1B
chr15	97259216	97281906	+	97259216	97271837	A3SS&ES	0.33	50	50	ENSMUST00000059433.8	ENSMUSG00000044250.9	Pced1b	chr15	protein_coding	PC-esterase domain containing 1B
chr15	97146958	97175215	+	97145045	97175215	A5SS	0.5	50	50	ENSMUST00000059433.8	ENSMUSG00000044250.9	Pced1b	chr15	protein_coding	PC-esterase domain containing 1B
chr15	97259216	97281909	+	97259216	97281906	A3SS	0.33	50	50	ENSMUST00000228521.2	ENSMUSG00000044250.9	Pced1b	chr15	protein_coding	PC-esterase domain containing 1B
chr15	97618641	97624388	-	97618641	97618719	5pMXE	0.5	50	50	ENSMUST00000023105.5	ENSMUSG00000022468.13	Endou	chr15	protein_coding	endonuclease, polyU-specific
chr15	97646551	97647532	-	97646551;97647427	97647377;97647532	ES	0.5	50	50	ENSMUST00000126854.9	ENSMUSG00000022469.18	Rapgef3	chr15	protein_coding	Rap guanine nucleotide exchange factor (GEF) 3
chr15	97648196	97665276	-	97664855	97665276	A3SS&ES	0.5	50	50	ENSMUST00000126854.9	ENSMUSG00000022469.18	Rapgef3	chr15	protein_coding	Rap guanine nucleotide exchange factor (GEF) 3
chr15	97655695	97655898	-	97655642	97655898	A3SS	0.5	50	50	ENSMUST00000126854.9	ENSMUSG00000022469.18	Rapgef3	chr15	protein_coding	Rap guanine nucleotide exchange factor (GEF) 3
chr15	97657930	97658251	-	97657930	97658460	A5SS	0.33	50	50	ENSMUST00000126854.9	ENSMUSG00000022469.18	Rapgef3	chr15	protein_coding	Rap guanine nucleotide exchange factor (GEF) 3
chr15	97659110	97659349	-	97659110	97659356	A5SS	0.5	50	50	ENSMUST00000126854.9	ENSMUSG00000022469.18	Rapgef3	chr15	protein_coding	Rap guanine nucleotide exchange factor (GEF) 3
chr15	97659613	97659701	-	97659613	97664643	A5SS	0.5	50	50	ENSMUST00000126854.9	ENSMUSG00000022469.18	Rapgef3	chr15	protein_coding	Rap guanine nucleotide exchange factor (GEF) 3
chr15	97664855	97665055	-	97664855	97665276	A5SS	0.5	50	50	ENSMUST00000126854.9	ENSMUSG00000022469.18	Rapgef3	chr15	protein_coding	Rap guanine nucleotide exchange factor (GEF) 3
chr15	97659613	97664643	-	97657930	97664643	A3SS	0.5	50	50	ENSMUST00000175894.8	ENSMUSG00000022469.18	Rapgef3	chr15	protein_coding	Rap guanine nucleotide exchange factor (GEF) 3
chr15	97657930	97658251	-	97657930	97664643	A5SS	0.33	50	50	ENSMUST00000175894.8	ENSMUSG00000022469.18	Rapgef3	chr15	protein_coding	Rap guanine nucleotide exchange factor (GEF) 3
chr15	97657930	97658460	-	97657930	97664643	A5SS	0.33	50	50	ENSMUST00000175894.8	ENSMUSG00000022469.18	Rapgef3	chr15	protein_coding	Rap guanine nucleotide exchange factor (GEF) 3
chr15	97646551	97647532	-	97647427	97647532	A3SS	0.5	50	50	ENSMUST00000123397.8	ENSMUSG00000022469.18	Rapgef3	chr15	protein_coding	Rap guanine nucleotide exchange factor (GEF) 3
chr15	97682497	97687784	+	97676461	97687784	A5SS	0.33	50	50	ENSMUST00000230531.2	ENSMUSG00000081534.4	Slc48a1	chr15	protein_coding	solute carrier family 48 (heme transporter), member 1
chr15	97682497	97688468	+	97687951	97688468	A5SS&ES	0.5	50	50	ENSMUST00000230531.2	ENSMUSG00000081534.4	Slc48a1	chr15	protein_coding	solute carrier family 48 (heme transporter), member 1
chr15	97684836	97687784	+	97676461	97687784	A5SS	0.33	50	50	ENSMUST00000230531.2	ENSMUSG00000081534.4	Slc48a1	chr15	protein_coding	solute carrier family 48 (heme transporter), member 1
chr15	97682497	97688468	+	97682497;97687951	97687784;97688468	ES	0.5	50	50	ENSMUST00000117892.2	ENSMUSG00000081534.4	Slc48a1	chr15	protein_coding	solute carrier family 48 (heme transporter), member 1
chr15	97682497;97684836	97684683;97687784	+	97682497	97687784	cassetteExon	0.5	100	100	ENSMUST00000117892.2	ENSMUSG00000081534.4	Slc48a1	chr15	protein_coding	solute carrier family 48 (heme transporter), member 1
chr15	97682497	97684683	+	97682497	97688468	A3SS	0.33	50	50	ENSMUST00000229084.2	ENSMUSG00000081534.4	Slc48a1	chr15	protein_coding	solute carrier family 48 (heme transporter), member 1
chr15	97697697	97699957	-	97697697;97698683	97698576;97699957	ES	0.25	50	50	ENSMUST00000079838.14	ENSMUSG00000022475.20	Hdac7	chr15	protein_coding	histone deacetylase 7
chr15	97704548	97705846	-	97704548;97705648	97705475;97705846	ES	0.33	50	50	ENSMUST00000079838.14	ENSMUSG00000022475.20	Hdac7	chr15	protein_coding	histone deacetylase 7
chr15	97706414	97706848	-	97706414;97706651	97706541;97706848	ES	0.5	50	50	ENSMUST00000079838.14	ENSMUSG00000022475.20	Hdac7	chr15	protein_coding	histone deacetylase 7
chr15	97709509	97741987	-	97709509	97729240	5pMXE	0.25	50	50	ENSMUST00000079838.14	ENSMUSG00000022475.20	Hdac7	chr15	protein_coding	histone deacetylase 7
chr15	97709509;97724672	97724616;97729240	-	97709509	97729240	cassetteExon	0.5	100	100	ENSMUST00000079838.14	ENSMUSG00000022475.20	Hdac7	chr15	protein_coding	histone deacetylase 7
chr15	97699210	97699957	-	97698683	97699957	A3SS	0.25	50	50	ENSMUST00000079838.14	ENSMUSG00000022475.20	Hdac7	chr15	protein_coding	histone deacetylase 7
chr15	97705669	97705846	-	97705648	97705846	A3SS	0.33	50	50	ENSMUST00000079838.14	ENSMUSG00000022475.20	Hdac7	chr15	protein_coding	histone deacetylase 7
chr15	97707920	97708734	-	97707848	97708734	A3SS	0.5	50	50	ENSMUST00000079838.14	ENSMUSG00000022475.20	Hdac7	chr15	protein_coding	histone deacetylase 7
chr15	97709509	97712590	-	97709509	97729240	A5SS	0.25	50	50	ENSMUST00000079838.14	ENSMUSG00000022475.20	Hdac7	chr15	protein_coding	histone deacetylase 7
chr15	97704548	97705846	-	97704548;97705669	97705475;97705846	ES	0.33	50	50	ENSMUST00000116408.9	ENSMUSG00000022475.20	Hdac7	chr15	protein_coding	histone deacetylase 7
chr15	97709509	97712590	-	97709509	97741987	A5SS	0.25	50	50	ENSMUST00000116408.9	ENSMUSG00000022475.20	Hdac7	chr15	protein_coding	histone deacetylase 7
chr15	97709509	97724616	-	97709509	97741987	A5SS	0.25	50	50	ENSMUST00000116408.9	ENSMUSG00000022475.20	Hdac7	chr15	protein_coding	histone deacetylase 7
chr15	97709509	97724616	-	97709509	97712590	5pMXE	0.25	50	50	ENSMUST00000121514.8	ENSMUSG00000022475.20	Hdac7	chr15	protein_coding	histone deacetylase 7
chr15	97696224;97697525	97697438;97699957	-	97696224;97698683	97698576;97699957	MXE	0.5	100	100	ENSMUST00000120683.8	ENSMUSG00000022475.20	Hdac7	chr15	protein_coding	histone deacetylase 7
chr15	97696224;97697697	97697438;97698576	-	97696224	97698576	cassetteExon	0.5	100	100	ENSMUST00000120683.8	ENSMUSG00000022475.20	Hdac7	chr15	protein_coding	histone deacetylase 7
chr15	97696224;97697697	97697438;97699957	-	97696224;97698683	97698576;97699957	MXE	0.5	100	100	ENSMUST00000120683.8	ENSMUSG00000022475.20	Hdac7	chr15	protein_coding	histone deacetylase 7
chr15	97697525	97699957	-	97697525	97697642	A5SS&ES	0.5	50	50	ENSMUST00000228466.2	ENSMUSG00000022475.20	Hdac7	chr15	protein_coding	histone deacetylase 7
chr15	97697697	97699957	-	97697697	97698576	A5SS	0.5	50	50	ENSMUST00000228466.2	ENSMUSG00000022475.20	Hdac7	chr15	protein_coding	histone deacetylase 7
chr15	97697525;97697697	97697642;97699957	-	97697525	97699957	cassetteExon	0.5	100	100	ENSMUST00000156045.8	ENSMUSG00000022475.20	Hdac7	chr15	protein_coding	histone deacetylase 7
chr15	97699210	97699957	-	97697525	97699957	A3SS	0.25	50	50	ENSMUST00000156045.8	ENSMUSG00000022475.20	Hdac7	chr15	protein_coding	histone deacetylase 7
chr15	97704548	97705846	-	97704548	97705475	5pMXE	0.5	50	50	ENSMUST00000135651.8	ENSMUSG00000022475.20	Hdac7	chr15	protein_coding	histone deacetylase 7
chr15	97699210	97699957	-	97697697	97699957	A3SS	0.25	50	50	ENSMUST00000135651.8	ENSMUSG00000022475.20	Hdac7	chr15	protein_coding	histone deacetylase 7
chr15	97786369	97806708	-	97786369	97806116	5pMXE	0.25	50	50	ENSMUST00000023119.15	ENSMUSG00000022479.16	Vdr	chr15	protein_coding	vitamin D (1,25-dihydroxyvitamin D3) receptor
chr15	97786369	97808400	-	97786369	97806116	5pMXE	0.25	50	50	ENSMUST00000023119.15	ENSMUSG00000022479.16	Vdr	chr15	protein_coding	vitamin D (1,25-dihydroxyvitamin D3) receptor
chr15	97786369	97794609	-	97786369	97806116	A5SS	0.25	50	50	ENSMUST00000023119.15	ENSMUSG00000022479.16	Vdr	chr15	protein_coding	vitamin D (1,25-dihydroxyvitamin D3) receptor
chr15	97786369	97806708	-	97786369	97794609	5pMXE	0.25	50	50	ENSMUST00000126568.8	ENSMUSG00000022479.16	Vdr	chr15	protein_coding	vitamin D (1,25-dihydroxyvitamin D3) receptor
chr15	97786369	97808400	-	97786369	97794609	5pMXE	0.25	50	50	ENSMUST00000126568.8	ENSMUSG00000022479.16	Vdr	chr15	protein_coding	vitamin D (1,25-dihydroxyvitamin D3) receptor
chr15	97786369;97806830	97806708;97808400	-	97786369	97808400	cassetteExon	0.5	100	100	ENSMUST00000173104.8	ENSMUSG00000022479.16	Vdr	chr15	protein_coding	vitamin D (1,25-dihydroxyvitamin D3) receptor
chr15	97806830	97806934	-	97806830	97808400	A5SS	0.5	50	50	ENSMUST00000174633.8	ENSMUSG00000022479.16	Vdr	chr15	protein_coding	vitamin D (1,25-dihydroxyvitamin D3) receptor
chr15	97862911	97863950	+	97862911	97864128	A3SS	0.5	50	50	ENSMUST00000229433.2	ENSMUSG00000052369.9	Tmem106c	chr15	protein_coding	transmembrane protein 106C
chr15	97862160	97862721	+	97862205	97862721	A5SS	0.2	50	50	ENSMUST00000229433.2	ENSMUSG00000052369.9	Tmem106c	chr15	protein_coding	transmembrane protein 106C
chr15	97862216	97862721	+	97862205	97862721	A5SS	0.2	50	50	ENSMUST00000229433.2	ENSMUSG00000052369.9	Tmem106c	chr15	protein_coding	transmembrane protein 106C
chr15	97862360	97862721	+	97862205	97862721	A5SS	0.2	50	50	ENSMUST00000229433.2	ENSMUSG00000052369.9	Tmem106c	chr15	protein_coding	transmembrane protein 106C
chr15	97862384	97862721	+	97862205	97862721	A5SS	0.2	50	50	ENSMUST00000229433.2	ENSMUSG00000052369.9	Tmem106c	chr15	protein_coding	transmembrane protein 106C
chr15	97862160	97862721	+	97862216	97862721	A5SS	0.2	50	50	ENSMUST00000229428.2	ENSMUSG00000052369.9	Tmem106c	chr15	protein_coding	transmembrane protein 106C
chr15	97862360	97862721	+	97862216	97862721	A5SS	0.2	50	50	ENSMUST00000229428.2	ENSMUSG00000052369.9	Tmem106c	chr15	protein_coding	transmembrane protein 106C
chr15	97862384	97862721	+	97862216	97862721	A5SS	0.2	50	50	ENSMUST00000229428.2	ENSMUSG00000052369.9	Tmem106c	chr15	protein_coding	transmembrane protein 106C
chr15	97862384	97862669	+	97862384	97862721	A3SS	0.5	50	50	ENSMUST00000064200.9	ENSMUSG00000052369.9	Tmem106c	chr15	protein_coding	transmembrane protein 106C
chr15	97862160	97862721	+	97862384	97862721	A5SS	0.2	50	50	ENSMUST00000064200.9	ENSMUSG00000052369.9	Tmem106c	chr15	protein_coding	transmembrane protein 106C
chr15	97862360	97862721	+	97862384	97862721	A5SS	0.2	50	50	ENSMUST00000064200.9	ENSMUSG00000052369.9	Tmem106c	chr15	protein_coding	transmembrane protein 106C
chr15	97862360	97862721	+	97862160	97862721	A5SS	0.2	50	50	ENSMUST00000230072.2	ENSMUSG00000052369.9	Tmem106c	chr15	protein_coding	transmembrane protein 106C
chr15	97897172;97898487	97898284;97902290	-	97897172	97902290	cassetteExon	0.5	100	100	ENSMUST00000088355.12	ENSMUSG00000022483.18	Col2a1	chr15	protein_coding	collagen, type II, alpha 1
chr15	97885602	97885992	-	97885602	97885965	A5SS	0.5	50	50	ENSMUST00000088355.12	ENSMUSG00000022483.18	Col2a1	chr15	protein_coding	collagen, type II, alpha 1
chr15	97887265	97888245	-	97887265	97888794	A5SS	0.5	50	50	ENSMUST00000088355.12	ENSMUSG00000022483.18	Col2a1	chr15	protein_coding	collagen, type II, alpha 1
chr15	97897172	97897527	-	97897172	97902290	A5SS	0.33	50	50	ENSMUST00000088355.12	ENSMUSG00000022483.18	Col2a1	chr15	protein_coding	collagen, type II, alpha 1
chr15	97897172	97897527	-	97897172	97898284	A5SS	0.33	50	50	ENSMUST00000023123.15	ENSMUSG00000022483.18	Col2a1	chr15	protein_coding	collagen, type II, alpha 1
chr15	97898487	97899428	-	97898487	97902290	A5SS	0.5	50	50	ENSMUST00000023123.15	ENSMUSG00000022483.18	Col2a1	chr15	protein_coding	collagen, type II, alpha 1
chr15	97897172	97902290	-	97897172	97898284	5pMXE	0.33	50	50	ENSMUST00000131560.3	ENSMUSG00000022483.18	Col2a1	chr15	protein_coding	collagen, type II, alpha 1
chr15	97897172	97902290	-	97898487	97902290	3pMXE	0.5	50	50	ENSMUST00000140064.2	ENSMUSG00000022483.18	Col2a1	chr15	protein_coding	collagen, type II, alpha 1
chr15	97957835;97959908	97959831;97962700	-	97957835	97962700	cassetteExon	0.5	100	100	ENSMUST00000044189.16	ENSMUSG00000033075.18	Senp1	chr15	protein_coding	SUMO1/sentrin specific peptidase 1
chr15	97974590;97974923	97974793;97980124	-	97974590	97980124	cassetteExon	0.5	100	100	ENSMUST00000044189.16	ENSMUSG00000033075.18	Senp1	chr15	protein_coding	SUMO1/sentrin specific peptidase 1
chr15	97987684	97991164	-	97985014	97991164	A3SS	0.5	50	50	ENSMUST00000044189.16	ENSMUSG00000033075.18	Senp1	chr15	protein_coding	SUMO1/sentrin specific peptidase 1
chr15	97946270	97946821	-	97946270	97954710	A5SS	0.5	50	50	ENSMUST00000044189.16	ENSMUSG00000033075.18	Senp1	chr15	protein_coding	SUMO1/sentrin specific peptidase 1
chr15	97985014	97990529	-	97985014	97991164	A5SS	0.5	50	50	ENSMUST00000044189.16	ENSMUSG00000033075.18	Senp1	chr15	protein_coding	SUMO1/sentrin specific peptidase 1
chr15	97957835	97962700	-	97957835	97959831	5pMXE	0.5	50	50	ENSMUST00000181855.8	ENSMUSG00000033075.18	Senp1	chr15	protein_coding	SUMO1/sentrin specific peptidase 1
chr15	97987684	97990529	-	97985014	97990529	A3SS	0.5	50	50	ENSMUST00000180657.2	ENSMUSG00000033075.18	Senp1	chr15	protein_coding	SUMO1/sentrin specific peptidase 1
chr15	97987684	97990529	-	97987684	97991164	A5SS	0.5	50	50	ENSMUST00000180531.2	ENSMUSG00000033075.18	Senp1	chr15	protein_coding	SUMO1/sentrin specific peptidase 1
chr15	97990546	98010002	+	97990546	98010035	A3SS	0.5	50	50	ENSMUST00000229280.2	ENSMUSG00000033065.15	Pfkm	chr15	protein_coding	phosphofructokinase, muscle
chr15	97993091	98010035	+	97990546	98010035	A5SS	0.33	50	50	ENSMUST00000229280.2	ENSMUSG00000033065.15	Pfkm	chr15	protein_coding	phosphofructokinase, muscle
chr15	98006492	98010035	+	97990546	98010035	A5SS	0.33	50	50	ENSMUST00000229280.2	ENSMUSG00000033065.15	Pfkm	chr15	protein_coding	phosphofructokinase, muscle
chr15	98006492	98010035	+	97993091	98010035	A5SS	0.33	50	50	ENSMUST00000229344.2	ENSMUSG00000033065.15	Pfkm	chr15	protein_coding	phosphofructokinase, muscle
chr15	98040695;98062697	98062620;98063352	-	98040695	98063352	cassetteExon	0.5	100	100	ENSMUST00000143400.8	ENSMUSG00000048175.14	Asb8	chr15	protein_coding	ankyrin repeat and SOCS box-containing 8
chr15	98040695	98043482	-	98040695	98063352	A5SS	0.33	50	50	ENSMUST00000143400.8	ENSMUSG00000048175.14	Asb8	chr15	protein_coding	ankyrin repeat and SOCS box-containing 8
chr15	98040695	98043482	-	98040691	98043482	A3SS	0.5	50	50	ENSMUST00000059112.12	ENSMUSG00000048175.14	Asb8	chr15	protein_coding	ankyrin repeat and SOCS box-containing 8
chr15	98040695	98062620	-	98040695	98043482	5pMXE	0.33	50	50	ENSMUST00000123626.8	ENSMUSG00000048175.14	Asb8	chr15	protein_coding	ankyrin repeat and SOCS box-containing 8
chr15	98086660	98087015	-	98085671	98087015	A3SS	0.5	50	50	ENSMUST00000165379.8	ENSMUSG00000075427.16	Olfr288	chr15	protein_coding	olfactory receptor 288
chr15	98106138	98107885	-	98085671	98107885	A3SS	0.25	50	50	ENSMUST00000142443.8	ENSMUSG00000108748.2	Gm44579	chr15	protein_coding	predicted gene 44579
chr15	98106258	98107885	-	98085671	98107885	A3SS	0.25	50	50	ENSMUST00000142443.8	ENSMUSG00000108748.2	Gm44579	chr15	protein_coding	predicted gene 44579
chr15	98107501	98107885	-	98085671	98107885	A3SS	0.25	50	50	ENSMUST00000142443.8	ENSMUSG00000108748.2	Gm44579	chr15	protein_coding	predicted gene 44579
chr15	98085671	98087015	-	98085671	98107885	A5SS	0.5	50	50	ENSMUST00000142443.8	ENSMUSG00000108748.2	Gm44579	chr15	protein_coding	predicted gene 44579
chr15	98106258;98107501	98107324;98107885	-	98106258	98107885	cassetteExon	0.5	100	100	ENSMUST00000170618.8	ENSMUSG00000090129.11	Olfr287	chr15	protein_coding	olfactory receptor 287
chr15	98106138	98107885	-	98106258	98107885	A3SS	0.25	50	50	ENSMUST00000170618.8	ENSMUSG00000090129.11	Olfr287	chr15	protein_coding	olfactory receptor 287
chr15	98107501	98107885	-	98106138	98107885	A3SS	0.25	50	50	ENSMUST00000155603.8	ENSMUSG00000090129.11	Olfr287	chr15	protein_coding	olfactory receptor 287
chr15	98106258	98107885	-	98107501	98107885	3pMXE	0.25	50	50	ENSMUST00000145768.2	ENSMUSG00000090129.11	Olfr287	chr15	protein_coding	olfactory receptor 287
chr15	98125525	98129104	-	98125525;98127176	98127059;98129104	ES	0.5	50	50	ENSMUST00000073612.7	ENSMUSG00000059460.8	Olfr286	chr15	protein_coding	olfactory receptor 286
chr15	98125399	98127059	-	98125525	98127059	A3SS	0.5	50	50	ENSMUST00000073612.7	ENSMUSG00000059460.8	Olfr286	chr15	protein_coding	olfactory receptor 286
chr15	98125525	98129104	-	98127176	98129104	A3SS&ES	0.5	50	50	ENSMUST00000205393.2	ENSMUSG00000059460.8	Olfr286	chr15	protein_coding	olfactory receptor 286
chr15	98189139	98190767	-	98189181	98190767	A3SS	0.5	50	50	ENSMUST00000169721.3	ENSMUSG00000022987.13	Zfp641	chr15	protein_coding	zinc finger protein 641
chr15	98296368	98299650	+	98296368;98296968	98296882;98299650	ES	0.5	50	50	ENSMUST00000191037.7	ENSMUSG00000099353.8	1700031M16Rik	chr15	transcribed_unitary_pseudogene	RIKEN cDNA 1700031M16 gene
chr15	98304787	98309855	+	98304787;98307493	98307469;98309855	ES	0.5	50	50	ENSMUST00000191037.7	ENSMUSG00000099353.8	1700031M16Rik	chr15	transcribed_unitary_pseudogene	RIKEN cDNA 1700031M16 gene
chr15	98309906	98310223	+	98309906	98311094	A3SS	0.2	50	50	ENSMUST00000191037.7	ENSMUSG00000099353.8	1700031M16Rik	chr15	transcribed_unitary_pseudogene	RIKEN cDNA 1700031M16 gene
chr15	98309906	98310558	+	98309906	98311094	A3SS	0.2	50	50	ENSMUST00000191037.7	ENSMUSG00000099353.8	1700031M16Rik	chr15	transcribed_unitary_pseudogene	RIKEN cDNA 1700031M16 gene
chr15	98309906	98311314	+	98309906	98311094	A3SS	0.2	50	50	ENSMUST00000191037.7	ENSMUSG00000099353.8	1700031M16Rik	chr15	transcribed_unitary_pseudogene	RIKEN cDNA 1700031M16 gene
chr15	98309906	98311317	+	98309906	98311094	A3SS	0.2	50	50	ENSMUST00000191037.7	ENSMUSG00000099353.8	1700031M16Rik	chr15	transcribed_unitary_pseudogene	RIKEN cDNA 1700031M16 gene
chr15	98309906	98310223	+	98309906	98311317	A3SS	0.2	50	50	ENSMUST00000189907.7	ENSMUSG00000099353.8	1700031M16Rik	chr15	transcribed_unitary_pseudogene	RIKEN cDNA 1700031M16 gene
chr15	98309906	98310558	+	98309906	98311317	A3SS	0.2	50	50	ENSMUST00000189907.7	ENSMUSG00000099353.8	1700031M16Rik	chr15	transcribed_unitary_pseudogene	RIKEN cDNA 1700031M16 gene
chr15	98309906	98311314	+	98309906	98311317	A3SS	0.2	50	50	ENSMUST00000189907.7	ENSMUSG00000099353.8	1700031M16Rik	chr15	transcribed_unitary_pseudogene	RIKEN cDNA 1700031M16 gene
chr15	98313269	98313966	+	98313269	98313624	A3SS&ES	0.5	50	50	ENSMUST00000189907.7	ENSMUSG00000099353.8	1700031M16Rik	chr15	transcribed_unitary_pseudogene	RIKEN cDNA 1700031M16 gene
chr15	98309906	98311314	+	98309906	98310223	3pMXE	0.2	50	50	ENSMUST00000185508.7	ENSMUSG00000099353.8	1700031M16Rik	chr15	transcribed_unitary_pseudogene	RIKEN cDNA 1700031M16 gene
chr15	98309906	98310558	+	98309906	98310223	A3SS	0.2	50	50	ENSMUST00000185508.7	ENSMUSG00000099353.8	1700031M16Rik	chr15	transcribed_unitary_pseudogene	RIKEN cDNA 1700031M16 gene
chr15	98309906	98311314	+	98309906;98310590	98310558;98311314	ES	0.5	50	50	ENSMUST00000186090.7	ENSMUSG00000099353.8	1700031M16Rik	chr15	transcribed_unitary_pseudogene	RIKEN cDNA 1700031M16 gene
chr15	98309906;98310590	98310223;98311314	+	98309906	98311314	cassetteExon	0.5	100	100	ENSMUST00000185584.7	ENSMUSG00000099353.8	1700031M16Rik	chr15	transcribed_unitary_pseudogene	RIKEN cDNA 1700031M16 gene
chr15	98296368	98299650	+	98296968	98299650	5pMXE	0.5	50	50	ENSMUST00000231222.2	ENSMUSG00000099353.8	1700031M16Rik	chr15	transcribed_unitary_pseudogene	RIKEN cDNA 1700031M16 gene
chr15	98332166	98335560	+	98332166	98335339	A3SS	0.5	50	50	ENSMUST00000215320.3	ENSMUSG00000063780.8	Olfr282	chr15	protein_coding	olfactory receptor 282
chr15	98329653	98332069	+	98329639	98332069	A5SS	0.5	50	50	ENSMUST00000215320.3	ENSMUSG00000063780.8	Olfr282	chr15	protein_coding	olfactory receptor 282
chr15	98390717	98395349	+	98390442	98395349	A5SS	0.5	50	50	ENSMUST00000205772.3	ENSMUSG00000054036.7	Olfr279	chr15	protein_coding	olfactory receptor 279
chr15	98427334	98429601	-	98427334;98429318	98429204;98429601	ES	0.5	50	50	ENSMUST00000230542.2	ENSMUSG00000022992.18	Kansl2	chr15	protein_coding	KAT8 regulatory NSL complex subunit 2
chr15	98418306	98422442	-	98418306	98422340	A5SS	0.5	50	50	ENSMUST00000230542.2	ENSMUSG00000022992.18	Kansl2	chr15	protein_coding	KAT8 regulatory NSL complex subunit 2
chr15	98431657	98432122	-	98431657	98431783	A5SS	0.5	50	50	ENSMUST00000230542.2	ENSMUSG00000022992.18	Kansl2	chr15	protein_coding	KAT8 regulatory NSL complex subunit 2
chr15	98444475	98446547	-	98444475;98444789	98444626;98446547	ES	0.5	50	50	ENSMUST00000169707.8	ENSMUSG00000011960.13	Ccnt1	chr15	protein_coding	cyclin T1
chr15	98444475	98446547	-	98444475	98444626	5pMXE	0.5	50	50	ENSMUST00000169674.8	ENSMUSG00000011960.13	Ccnt1	chr15	protein_coding	cyclin T1
chr15	98502613	98507621	-	98502613	98505362	5pMXE	0.33	50	50	ENSMUST00000096224.6	ENSMUSG00000022994.10	Adcy6	chr15	protein_coding	adenylate cyclase 6
chr15	98502613	98507929	-	98502613	98505362	5pMXE	0.33	50	50	ENSMUST00000096224.6	ENSMUSG00000022994.10	Adcy6	chr15	protein_coding	adenylate cyclase 6
chr15	98491546	98492086	-	98491546	98492212	A5SS	0.5	50	50	ENSMUST00000096224.6	ENSMUSG00000022994.10	Adcy6	chr15	protein_coding	adenylate cyclase 6
chr15	98496644	98496744	-	98496644	98496739	A5SS	0.5	50	50	ENSMUST00000096224.6	ENSMUSG00000022994.10	Adcy6	chr15	protein_coding	adenylate cyclase 6
chr15	98497908	98498059	-	98497908	98498053	A5SS	0.5	50	50	ENSMUST00000096224.6	ENSMUSG00000022994.10	Adcy6	chr15	protein_coding	adenylate cyclase 6
chr15	98502613	98507621	-	98502613	98507929	A5SS	0.33	50	50	ENSMUST00000227501.2	ENSMUSG00000022994.10	Adcy6	chr15	protein_coding	adenylate cyclase 6
chr15	98529812	98537369	+	98529307	98537369	A5SS	0.25	50	50	ENSMUST00000229223.2	ENSMUSG00000003352.15	Cacnb3	chr15	protein_coding	calcium channel, voltage-dependent, beta 3 subunit
chr15	98530401	98537369	+	98529307	98537369	A5SS	0.25	50	50	ENSMUST00000229223.2	ENSMUSG00000003352.15	Cacnb3	chr15	protein_coding	calcium channel, voltage-dependent, beta 3 subunit
chr15	98533094	98537369	+	98529307	98537369	A5SS	0.25	50	50	ENSMUST00000229223.2	ENSMUSG00000003352.15	Cacnb3	chr15	protein_coding	calcium channel, voltage-dependent, beta 3 subunit
chr15	98530401	98537369	+	98529812	98537369	A5SS	0.25	50	50	ENSMUST00000230769.2	ENSMUSG00000003352.15	Cacnb3	chr15	protein_coding	calcium channel, voltage-dependent, beta 3 subunit
chr15	98533094	98537369	+	98529812	98537369	A5SS	0.25	50	50	ENSMUST00000230769.2	ENSMUSG00000003352.15	Cacnb3	chr15	protein_coding	calcium channel, voltage-dependent, beta 3 subunit
chr15	98538631	98539058	+	98538631;98538859	98538840;98539058	ES	0.5	50	50	ENSMUST00000109150.9	ENSMUSG00000003352.15	Cacnb3	chr15	protein_coding	calcium channel, voltage-dependent, beta 3 subunit
chr15	98538859	98539281	+	98538859;98539138	98539058;98539281	ES	0.5	50	50	ENSMUST00000109150.9	ENSMUSG00000003352.15	Cacnb3	chr15	protein_coding	calcium channel, voltage-dependent, beta 3 subunit
chr15	98530401	98532029	+	98530401	98537369	A3SS	0.5	50	50	ENSMUST00000109150.9	ENSMUSG00000003352.15	Cacnb3	chr15	protein_coding	calcium channel, voltage-dependent, beta 3 subunit
chr15	98538335	98538570	+	98538335	98538567	A3SS	0.5	50	50	ENSMUST00000109150.9	ENSMUSG00000003352.15	Cacnb3	chr15	protein_coding	calcium channel, voltage-dependent, beta 3 subunit
chr15	98533094	98537369	+	98530401	98537369	A5SS	0.25	50	50	ENSMUST00000109150.9	ENSMUSG00000003352.15	Cacnb3	chr15	protein_coding	calcium channel, voltage-dependent, beta 3 subunit
chr15	98538631;98539138	98539058;98539281	+	98538631;98538859	98538840;98539281	MXE	0.5	100	100	ENSMUST00000003442.9	ENSMUSG00000003352.15	Cacnb3	chr15	protein_coding	calcium channel, voltage-dependent, beta 3 subunit
chr15	98556316	98560659	-	98556316	98560704	A5SS	0.5	50	50	ENSMUST00000003450.15	ENSMUSG00000003360.16	Ddx23	chr15	protein_coding	DEAD box helicase 23
chr15	98568723	98570392	-	98561771	98570392	A3SS	0.5	50	50	ENSMUST00000109149.9	ENSMUSG00000054855.14	Rnd1	chr15	protein_coding	Rho family GTPase 1
chr15	98607103	98608660	+	98607103	98615305	A3SS	0.5	50	50	ENSMUST00000003444.6	ENSMUSG00000003354.7	Ccdc65	chr15	protein_coding	coiled-coil domain containing 65
chr15	98639315	98660861	-	98639315;98640710	98640474;98660861	ES	0.5	50	50	ENSMUST00000053183.12	ENSMUSG00000051853.11	Arf3	chr15	protein_coding	ADP-ribosylation factor 3
chr15	98640710	98660606	-	98640710	98660861	A5SS	0.5	50	50	ENSMUST00000053183.12	ENSMUSG00000051853.11	Arf3	chr15	protein_coding	ADP-ribosylation factor 3
chr15	98672378;98674661	98674399;98674771	-	98672378	98674771	cassetteExon	0.5	100	100	ENSMUST00000228546.2	ENSMUSG00000022996.16	Wnt10b	chr15	protein_coding	wingless-type MMTV integration site family, member 10B
chr15	98674882	98675739	-	98674884	98675739	A3SS	0.5	50	50	ENSMUST00000228546.2	ENSMUSG00000022996.16	Wnt10b	chr15	protein_coding	wingless-type MMTV integration site family, member 10B
chr15	98670815	98672005	-	98670815	98672293	A5SS	0.5	50	50	ENSMUST00000228546.2	ENSMUSG00000022996.16	Wnt10b	chr15	protein_coding	wingless-type MMTV integration site family, member 10B
chr15	98674884	98675035	-	98674884	98675739	A5SS	0.5	50	50	ENSMUST00000228546.2	ENSMUSG00000022996.16	Wnt10b	chr15	protein_coding	wingless-type MMTV integration site family, member 10B
chr15	98705105	98711123	+	98705105	98711258	A3SS	0.5	50	50	ENSMUST00000181510.3	ENSMUSG00000097414.3	B130046B21Rik	chr15	lncRNA	RIKEN cDNA B130046B21 gene
chr15	98723614	98723935	-	98723614	98729311	A5SS	0.33	50	50	ENSMUST00000168846.3	ENSMUSG00000067713.8	Prkag1	chr15	protein_coding	protein kinase, AMP-activated, gamma 1 non-catalytic subunit
chr15	98723614	98728768	-	98723614	98729311	A5SS	0.33	50	50	ENSMUST00000168846.3	ENSMUSG00000067713.8	Prkag1	chr15	protein_coding	protein kinase, AMP-activated, gamma 1 non-catalytic subunit
chr15	98723614	98723935	-	98723614	98728768	A5SS	0.33	50	50	ENSMUST00000230560.2	ENSMUSG00000067713.8	Prkag1	chr15	protein_coding	protein kinase, AMP-activated, gamma 1 non-catalytic subunit
chr15	98733348;98734509	98734462;98734956	-	98733348	98734956	cassetteExon	0.5	100	100	ENSMUST00000178486.9	ENSMUSG00000048154.18	Kmt2d	chr15	protein_coding	lysine (K)-specific methyltransferase 2D
chr15	98745362	98747057	-	98745362	98747101	A5SS	0.5	50	50	ENSMUST00000178486.9	ENSMUSG00000048154.18	Kmt2d	chr15	protein_coding	lysine (K)-specific methyltransferase 2D
chr15	98753779	98753950	-	98753779	98753959	A5SS	0.5	50	50	ENSMUST00000178486.9	ENSMUSG00000048154.18	Kmt2d	chr15	protein_coding	lysine (K)-specific methyltransferase 2D
chr15	98776474	98776889	-	98776415	98776889	A3SS	0.5	50	50	ENSMUST00000229348.2	ENSMUSG00000023755.11	Rhebl1	chr15	protein_coding	Ras homolog enriched in brain like 1
chr15	98777368	98777658	-	98777368	98777646	A5SS	0.5	50	50	ENSMUST00000229348.2	ENSMUSG00000023755.11	Rhebl1	chr15	protein_coding	Ras homolog enriched in brain like 1
chr15	98778460	98778596	-	98778460	98779031	A5SS	0.5	50	50	ENSMUST00000229348.2	ENSMUSG00000023755.11	Rhebl1	chr15	protein_coding	Ras homolog enriched in brain like 1
chr15	98779165	98792157	-	98779165	98791724	5pMXE	0.5	50	50	ENSMUST00000229352.2	ENSMUSG00000023755.11	Rhebl1	chr15	protein_coding	Ras homolog enriched in brain like 1
chr15	98813102	98813464	-	98813102	98815731	A5SS	0.33	50	50	ENSMUST00000023736.10	ENSMUSG00000022999.16	Lmbr1l	chr15	protein_coding	limb region 1 like
chr15	98813102	98815022	-	98813102	98815731	A5SS	0.33	50	50	ENSMUST00000023736.10	ENSMUSG00000022999.16	Lmbr1l	chr15	protein_coding	limb region 1 like
chr15	98813102	98815022	-	98813102	98813464	5pMXE	0.33	50	50	ENSMUST00000109127.8	ENSMUSG00000022999.16	Lmbr1l	chr15	protein_coding	limb region 1 like
chr15	98848895	98849069	-	98830443	98849069	A3SS	0.5	50	50	ENSMUST00000134214.3	ENSMUSG00000116358.2	Gm49450	chr15	protein_coding	predicted gene, 49450
chr15	98830443	98830573	-	98830443	98849069	A5SS	0.5	50	50	ENSMUST00000134214.3	ENSMUSG00000116358.2	Gm49450	chr15	protein_coding	predicted gene, 49450
chr15	98832707	98837185	+	98832300	98837185	A5SS	0.5	50	50	ENSMUST00000229156.2	ENSMUSG00000116223.2	Gm41396	chr15	lncRNA	predicted gene, 41396
chr15	98886026	98886621	+	98886026	98886500	A3SS&ES	0.5	50	50	ENSMUST00000230013.2	ENSMUSG00000097587.3	4930578M01Rik	chr15	lncRNA	RIKEN cDNA 4930578M01 gene
chr15	98885711	98885858	+	98881745	98885858	A5SS	0.5	50	50	ENSMUST00000230013.2	ENSMUSG00000097587.3	4930578M01Rik	chr15	lncRNA	RIKEN cDNA 4930578M01 gene
chr15	98955776	98956483	+	98955776	98956486	A3SS	0.5	50	50	ENSMUST00000230021.2	ENSMUSG00000023484.15	Prph	chr15	protein_coding	peripherin
chr15	98972973	98973231	+	98972948	98973231	A5SS	0.5	50	50	ENSMUST00000230054.2	ENSMUSG00000032783.10	Troap	chr15	protein_coding	trophinin associated protein
chr15	98997481	98998704	+	98997194	98998704	A5SS	0.5	50	50	ENSMUST00000146173.2	ENSMUSG00000038009.8	Dnajc22	chr15	protein_coding	DnaJ heat shock protein family (Hsp40) member C22
chr15	99023907	99064990	+	99023907	99047515	A3SS&ES	0.5	50	50	ENSMUST00000230628.2	ENSMUSG00000051934.6	Spats2	chr15	protein_coding	spermatogenesis associated, serine-rich 2
chr15	99047811	99064990	+	99047811	99064961	A3SS	0.5	50	50	ENSMUST00000230628.2	ENSMUSG00000051934.6	Spats2	chr15	protein_coding	spermatogenesis associated, serine-rich 2
chr15	99024037	99047515	+	99023907	99047515	A5SS	0.33	50	50	ENSMUST00000230628.2	ENSMUSG00000051934.6	Spats2	chr15	protein_coding	spermatogenesis associated, serine-rich 2
chr15	99024768	99047515	+	99023907	99047515	A5SS	0.33	50	50	ENSMUST00000230628.2	ENSMUSG00000051934.6	Spats2	chr15	protein_coding	spermatogenesis associated, serine-rich 2
chr15	99024768	99064961	+	99047811	99064961	A5SS&ES	0.5	50	50	ENSMUST00000230628.2	ENSMUSG00000051934.6	Spats2	chr15	protein_coding	spermatogenesis associated, serine-rich 2
chr15	99023907;99047811	99047515;99064990	+	99023907	99064990	cassetteExon	0.5	100	100	ENSMUST00000229073.2	ENSMUSG00000051934.6	Spats2	chr15	protein_coding	spermatogenesis associated, serine-rich 2
chr15	99024768	99047515	+	99024037	99047515	A5SS	0.33	50	50	ENSMUST00000229147.2	ENSMUSG00000051934.6	Spats2	chr15	protein_coding	spermatogenesis associated, serine-rich 2
chr15	99024768	99064961	+	99024768;99047811	99047515;99064961	ES	0.5	50	50	ENSMUST00000063517.6	ENSMUSG00000051934.6	Spats2	chr15	protein_coding	spermatogenesis associated, serine-rich 2
chr15	99024768	99064961	+	99024768	99047515	A3SS&ES	0.5	50	50	ENSMUST00000229663.2	ENSMUSG00000051934.6	Spats2	chr15	protein_coding	spermatogenesis associated, serine-rich 2
chr15	99135840	99135956	+	99131997	99135956	A5SS	0.5	50	50	ENSMUST00000041415.5	ENSMUSG00000037579.8	Kcnh3	chr15	protein_coding	potassium voltage-gated channel, subfamily H (eag-related), member 3
chr15	99147895	99149743	-	99147895;99148463	99148344;99149743	ES	0.33	50	50	ENSMUST00000041190.17	ENSMUSG00000037570.17	Mcrs1	chr15	protein_coding	microspherule protein 1
chr15	99147887	99148344	-	99147895	99148344	A3SS	0.5	50	50	ENSMUST00000041190.17	ENSMUSG00000037570.17	Mcrs1	chr15	protein_coding	microspherule protein 1
chr15	99148463	99149603	-	99148463	99149743	A5SS	0.5	50	50	ENSMUST00000041190.17	ENSMUSG00000037570.17	Mcrs1	chr15	protein_coding	microspherule protein 1
chr15	99147895	99149743	-	99146741	99149743	A3SS	0.33	50	50	ENSMUST00000229671.2	ENSMUSG00000037570.17	Mcrs1	chr15	protein_coding	microspherule protein 1
chr15	99148463	99149743	-	99146741	99149743	A3SS	0.33	50	50	ENSMUST00000229671.2	ENSMUSG00000037570.17	Mcrs1	chr15	protein_coding	microspherule protein 1
chr15	99146741	99147249	-	99146741	99149743	A5SS	0.5	50	50	ENSMUST00000229671.2	ENSMUSG00000037570.17	Mcrs1	chr15	protein_coding	microspherule protein 1
chr15	99147895	99149743	-	99148463	99149743	A3SS&ES	0.33	50	50	ENSMUST00000229926.2	ENSMUSG00000037570.17	Mcrs1	chr15	protein_coding	microspherule protein 1
chr15	99147895	99149743	-	99147895	99148344	A5SS&ES	0.5	50	50	ENSMUST00000229359.2	ENSMUSG00000037570.17	Mcrs1	chr15	protein_coding	microspherule protein 1
chr15	99149882	99159506	+	99147612	99159506	A5SS	0.5	50	50	ENSMUST00000231167.2	ENSMUSG00000100599.3	1700120C14Rik	chr15	lncRNA	RIKEN cDNA 1700120C14 gene
chr15	99183546	99193620	-	99183546	99184826	5pMXE	0.5	50	50	ENSMUST00000109100.2	ENSMUSG00000078907.3	Fam186b	chr15	protein_coding	family with sequence similarity 186, member B
chr15	99202371	99203289	+	99202371;99203074	99203047;99203289	ES	0.5	50	50	ENSMUST00000128352.8	ENSMUSG00000023007.16	Prpf40b	chr15	protein_coding	pre-mRNA processing factor 40B
chr15	99193154;99199865	99199668;99201164	+	99193154	99201164	cassetteExon	0.5	100	100	ENSMUST00000128352.8	ENSMUSG00000023007.16	Prpf40b	chr15	protein_coding	pre-mRNA processing factor 40B
chr15	99193309	99201164	+	99193154	99201164	A5SS	0.33	50	50	ENSMUST00000128352.8	ENSMUSG00000023007.16	Prpf40b	chr15	protein_coding	pre-mRNA processing factor 40B
chr15	99193791	99201922	+	99201244	99201922	A5SS&ES	0.5	50	50	ENSMUST00000128352.8	ENSMUSG00000023007.16	Prpf40b	chr15	protein_coding	pre-mRNA processing factor 40B
chr15	99213450	99213968	+	99213450;99213781	99213604;99213968	ES	0.5	50	50	ENSMUST00000150641.8	ENSMUSG00000023007.16	Prpf40b	chr15	protein_coding	pre-mRNA processing factor 40B
chr15	99207916	99212480	+	99207916	99212459	A3SS	0.5	50	50	ENSMUST00000150641.8	ENSMUSG00000023007.16	Prpf40b	chr15	protein_coding	pre-mRNA processing factor 40B
chr15	99212861	99212993	+	99212861	99213072	A3SS	0.5	50	50	ENSMUST00000150641.8	ENSMUSG00000023007.16	Prpf40b	chr15	protein_coding	pre-mRNA processing factor 40B
chr15	99213167	99213364	+	99213167	99213361	A3SS	0.5	50	50	ENSMUST00000150641.8	ENSMUSG00000023007.16	Prpf40b	chr15	protein_coding	pre-mRNA processing factor 40B
chr15	99213462	99213604	+	99213450	99213604	A5SS	0.5	50	50	ENSMUST00000150641.8	ENSMUSG00000023007.16	Prpf40b	chr15	protein_coding	pre-mRNA processing factor 40B
chr15	99199865	99201164	+	99193309	99201164	A5SS	0.33	50	50	ENSMUST00000130575.8	ENSMUSG00000023007.16	Prpf40b	chr15	protein_coding	pre-mRNA processing factor 40B
chr15	99213462	99213716	+	99213462	99213604	A3SS	0.5	50	50	ENSMUST00000145482.8	ENSMUSG00000023007.16	Prpf40b	chr15	protein_coding	pre-mRNA processing factor 40B
chr15	99213450	99213968	+	99213781	99213968	A5SS&ES	0.5	50	50	ENSMUST00000145482.8	ENSMUSG00000023007.16	Prpf40b	chr15	protein_coding	pre-mRNA processing factor 40B
chr15	99213450	99213968	+	99213450	99213604	3pMXE	0.5	50	50	ENSMUST00000153692.2	ENSMUSG00000023007.16	Prpf40b	chr15	protein_coding	pre-mRNA processing factor 40B
chr15	99216253;99216898	99216799;99217012	-	99216253	99217012	cassetteExon	0.5	100	100	ENSMUST00000081224.14	ENSMUSG00000023008.19	Fmnl3	chr15	protein_coding	formin-like 3
chr15	99226047;99227313	99226975;99229868	-	99226047	99229868	cassetteExon	0.5	100	100	ENSMUST00000081224.14	ENSMUSG00000023008.19	Fmnl3	chr15	protein_coding	formin-like 3
chr15	99226047;99227313	99227161;99229868	-	99226047	99229868	cassetteExon	0.5	100	100	ENSMUST00000081224.14	ENSMUSG00000023008.19	Fmnl3	chr15	protein_coding	formin-like 3
chr15	99226047;99227057	99226975;99227161	-	99226047	99227161	cassetteExon	0.5	100	100	ENSMUST00000120633.2	ENSMUSG00000023008.19	Fmnl3	chr15	protein_coding	formin-like 3
chr15	99290921;99291611	99291576;99299461	+	99290921	99299461	cassetteExon	0.5	100	100	ENSMUST00000023749.15	ENSMUSG00000023010.16	Tmbim6	chr15	protein_coding	transmembrane BAX inhibitor motif containing 6
chr15	99290921;99297752	99297538;99299461	+	99290921	99299461	cassetteExon	0.5	100	100	ENSMUST00000023749.15	ENSMUSG00000023010.16	Tmbim6	chr15	protein_coding	transmembrane BAX inhibitor motif containing 6
chr15	99290921;99298088	99297942;99299461	+	99290921	99299461	cassetteExon	0.5	100	100	ENSMUST00000023749.15	ENSMUSG00000023010.16	Tmbim6	chr15	protein_coding	transmembrane BAX inhibitor motif containing 6
chr15	99305224	99305824	+	99305224	99306356	A3SS	0.5	50	50	ENSMUST00000023749.15	ENSMUSG00000023010.16	Tmbim6	chr15	protein_coding	transmembrane BAX inhibitor motif containing 6
chr15	99291264	99299461	+	99290921	99299461	A5SS	0.16	50	50	ENSMUST00000023749.15	ENSMUSG00000023010.16	Tmbim6	chr15	protein_coding	transmembrane BAX inhibitor motif containing 6
chr15	99291575	99299461	+	99290921	99299461	A5SS	0.16	50	50	ENSMUST00000023749.15	ENSMUSG00000023010.16	Tmbim6	chr15	protein_coding	transmembrane BAX inhibitor motif containing 6
chr15	99290921;99297752	99297538;99299461	+	99290921;99291611	99291576;99299461	MXE	0.5	100	100	ENSMUST00000160635.8	ENSMUSG00000023010.16	Tmbim6	chr15	protein_coding	transmembrane BAX inhibitor motif containing 6
chr15	99290921;99298088	99297942;99299461	+	99290921;99291611	99291576;99299461	MXE	0.5	100	100	ENSMUST00000160635.8	ENSMUSG00000023010.16	Tmbim6	chr15	protein_coding	transmembrane BAX inhibitor motif containing 6
chr15	99291264	99299461	+	99291611	99299461	A5SS&ES	0.16	50	50	ENSMUST00000160635.8	ENSMUSG00000023010.16	Tmbim6	chr15	protein_coding	transmembrane BAX inhibitor motif containing 6
chr15	99290921;99298088	99297942;99299461	+	99290921;99297752	99297538;99299461	MXE	0.5	100	100	ENSMUST00000161250.8	ENSMUSG00000023010.16	Tmbim6	chr15	protein_coding	transmembrane BAX inhibitor motif containing 6
chr15	99291264	99299461	+	99297752	99299461	A5SS&ES	0.16	50	50	ENSMUST00000161250.8	ENSMUSG00000023010.16	Tmbim6	chr15	protein_coding	transmembrane BAX inhibitor motif containing 6
chr15	99291575	99299461	+	99297752	99299461	A5SS&ES	0.16	50	50	ENSMUST00000161250.8	ENSMUSG00000023010.16	Tmbim6	chr15	protein_coding	transmembrane BAX inhibitor motif containing 6
chr15	99290921	99291576	+	99290921	99302295	A3SS	0.2	50	50	ENSMUST00000229392.2	ENSMUSG00000023010.16	Tmbim6	chr15	protein_coding	transmembrane BAX inhibitor motif containing 6
chr15	99290921	99297538	+	99290921	99302295	A3SS	0.2	50	50	ENSMUST00000229392.2	ENSMUSG00000023010.16	Tmbim6	chr15	protein_coding	transmembrane BAX inhibitor motif containing 6
chr15	99290921	99297942	+	99290921	99302295	A3SS	0.2	50	50	ENSMUST00000229392.2	ENSMUSG00000023010.16	Tmbim6	chr15	protein_coding	transmembrane BAX inhibitor motif containing 6
chr15	99290921	99299461	+	99290921	99302295	A3SS	0.2	50	50	ENSMUST00000229392.2	ENSMUSG00000023010.16	Tmbim6	chr15	protein_coding	transmembrane BAX inhibitor motif containing 6
chr15	99300050	99302295	+	99290921	99302295	A5SS	0.5	50	50	ENSMUST00000229392.2	ENSMUSG00000023010.16	Tmbim6	chr15	protein_coding	transmembrane BAX inhibitor motif containing 6
chr15	99291264	99299461	+	99298088	99299461	A5SS&ES	0.16	50	50	ENSMUST00000161778.8	ENSMUSG00000023010.16	Tmbim6	chr15	protein_coding	transmembrane BAX inhibitor motif containing 6
chr15	99291575	99299461	+	99298088	99299461	A5SS&ES	0.16	50	50	ENSMUST00000161778.8	ENSMUSG00000023010.16	Tmbim6	chr15	protein_coding	transmembrane BAX inhibitor motif containing 6
chr15	99291575	99299461	+	99291264	99299461	A5SS	0.16	50	50	ENSMUST00000159209.8	ENSMUSG00000023010.16	Tmbim6	chr15	protein_coding	transmembrane BAX inhibitor motif containing 6
chr15	99290921	99299461	+	99291611	99299461	5pMXE	0.16	50	50	ENSMUST00000162624.8	ENSMUSG00000023010.16	Tmbim6	chr15	protein_coding	transmembrane BAX inhibitor motif containing 6
chr15	99291575	99299461	+	99291611	99299461	A5SS	0.16	50	50	ENSMUST00000162624.8	ENSMUSG00000023010.16	Tmbim6	chr15	protein_coding	transmembrane BAX inhibitor motif containing 6
chr15	99297752	99299461	+	99291611	99299461	A5SS	0.16	50	50	ENSMUST00000162624.8	ENSMUSG00000023010.16	Tmbim6	chr15	protein_coding	transmembrane BAX inhibitor motif containing 6
chr15	99298088	99299461	+	99291611	99299461	A5SS	0.16	50	50	ENSMUST00000162624.8	ENSMUSG00000023010.16	Tmbim6	chr15	protein_coding	transmembrane BAX inhibitor motif containing 6
chr15	99332070	99355513	-	99332070;99333968	99333908;99355513	ES	0.5	50	50	ENSMUST00000023747.14	ENSMUSG00000023009.15	Nckap5l	chr15	protein_coding	NCK-associated protein 5-like
chr15	99322158	99322270	-	99322158	99323434	A5SS	0.33	50	50	ENSMUST00000023747.14	ENSMUSG00000023009.15	Nckap5l	chr15	protein_coding	NCK-associated protein 5-like
chr15	99322158	99322385	-	99322158	99323434	A5SS	0.33	50	50	ENSMUST00000023747.14	ENSMUSG00000023009.15	Nckap5l	chr15	protein_coding	NCK-associated protein 5-like
chr15	99322158	99322270	-	99322158	99322385	A5SS	0.33	50	50	ENSMUST00000161004.2	ENSMUSG00000023009.15	Nckap5l	chr15	protein_coding	NCK-associated protein 5-like
chr15	99419117	99422582	-	99419153	99422582	A3SS	0.5	50	50	ENSMUST00000023750.9	ENSMUSG00000023011.9	Faim2	chr15	protein_coding	Fas apoptotic inhibitory molecule 2
chr15	99408516	99408698	-	99408516	99410377	A5SS	0.5	50	50	ENSMUST00000023750.9	ENSMUSG00000023011.9	Faim2	chr15	protein_coding	Fas apoptotic inhibitory molecule 2
chr15	99490707	99492016	+	99490707;99491210	99491127;99492016	ES	0.5	50	50	ENSMUST00000169082.3	ENSMUSG00000044217.18	Aqp5	chr15	protein_coding	aquaporin 5
chr15	99489515	99490548	+	99489515	99490543	A3SS	0.5	50	50	ENSMUST00000169082.3	ENSMUSG00000044217.18	Aqp5	chr15	protein_coding	aquaporin 5
chr15	99489164	99490543	+	99489515	99490543	A5SS	0.5	50	50	ENSMUST00000169082.3	ENSMUSG00000044217.18	Aqp5	chr15	protein_coding	aquaporin 5
chr15	99540852	99549388	-	99540852;99541404	99541274;99549388	ES	0.33	50	50	ENSMUST00000171702.8	ENSMUSG00000023015.15	Racgap1	chr15	protein_coding	Rac GTPase-activating protein 1
chr15	99532231	99534013	-	99532176	99534013	A3SS	0.5	50	50	ENSMUST00000171702.8	ENSMUSG00000023015.15	Racgap1	chr15	protein_coding	Rac GTPase-activating protein 1
chr15	99537686	99540764	-	99537700	99540764	A3SS	0.33	50	50	ENSMUST00000171702.8	ENSMUSG00000023015.15	Racgap1	chr15	protein_coding	Rac GTPase-activating protein 1
chr15	99540848	99541274	-	99540852	99541274	A3SS	0.5	50	50	ENSMUST00000171702.8	ENSMUSG00000023015.15	Racgap1	chr15	protein_coding	Rac GTPase-activating protein 1
chr15	99540848	99549388	-	99541404	99549388	A3SS&ES	0.33	50	50	ENSMUST00000171702.8	ENSMUSG00000023015.15	Racgap1	chr15	protein_coding	Rac GTPase-activating protein 1
chr15	99540852	99541303	-	99540852	99541274	A5SS	0.33	50	50	ENSMUST00000171702.8	ENSMUSG00000023015.15	Racgap1	chr15	protein_coding	Rac GTPase-activating protein 1
chr15	99540852;99541404	99541303;99549388	-	99540852	99549388	cassetteExon	0.5	100	100	ENSMUST00000023756.12	ENSMUSG00000023015.15	Racgap1	chr15	protein_coding	Rac GTPase-activating protein 1
chr15	99540848	99549388	-	99540852	99549388	A3SS	0.33	50	50	ENSMUST00000023756.12	ENSMUSG00000023015.15	Racgap1	chr15	protein_coding	Rac GTPase-activating protein 1
chr15	99537686	99540764	-	99526679	99540764	A3SS	0.33	50	50	ENSMUST00000169700.9	ENSMUSG00000023015.15	Racgap1	chr15	protein_coding	Rac GTPase-activating protein 1
chr15	99537700	99540764	-	99526679	99540764	A3SS	0.33	50	50	ENSMUST00000169700.9	ENSMUSG00000023015.15	Racgap1	chr15	protein_coding	Rac GTPase-activating protein 1
chr15	99526679	99528990	-	99526679	99540764	A5SS	0.5	50	50	ENSMUST00000169700.9	ENSMUSG00000023015.15	Racgap1	chr15	protein_coding	Rac GTPase-activating protein 1
chr15	99540848;99541404	99541274;99549388	-	99540848	99549388	cassetteExon	0.5	100	100	ENSMUST00000169810.8	ENSMUSG00000023015.15	Racgap1	chr15	protein_coding	Rac GTPase-activating protein 1
chr15	99540852	99549388	-	99541404	99549388	A3SS&ES	0.33	50	50	ENSMUST00000109581.3	ENSMUSG00000023015.15	Racgap1	chr15	protein_coding	Rac GTPase-activating protein 1
chr15	99593481	99594853	+	99593481;99594543	99594393;99594853	ES	0.5	50	50	ENSMUST00000023758.9	ENSMUSG00000023017.11	Asic1	chr15	protein_coding	acid-sensing (proton-gated) ion channel 1
chr15	99590908	99592575	+	99570944	99592575	A5SS	0.5	50	50	ENSMUST00000023758.9	ENSMUSG00000023017.11	Asic1	chr15	protein_coding	acid-sensing (proton-gated) ion channel 1
chr15	99593145	99593354	+	99592725	99593354	A5SS	0.5	50	50	ENSMUST00000023758.9	ENSMUSG00000023017.11	Asic1	chr15	protein_coding	acid-sensing (proton-gated) ion channel 1
chr15	99601741	99603508	+	99601741;99602334	99602212;99603508	ES	0.5	50	50	ENSMUST00000023759.6	ENSMUSG00000023018.6	Smarcd1	chr15	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
chr15	99600502	99600987	+	99600379	99600987	A5SS	0.33	50	50	ENSMUST00000023759.6	ENSMUSG00000023018.6	Smarcd1	chr15	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
chr15	99600567	99600987	+	99600379	99600987	A5SS	0.33	50	50	ENSMUST00000023759.6	ENSMUSG00000023018.6	Smarcd1	chr15	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
chr15	99600567	99600987	+	99600502	99600987	A5SS	0.33	50	50	ENSMUST00000228984.2	ENSMUSG00000023018.6	Smarcd1	chr15	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
chr15	99616210	99617084	+	99616210	99617015	A3SS	0.5	50	50	ENSMUST00000023760.13	ENSMUSG00000023019.13	Gpd1	chr15	protein_coding	glycerol-3-phosphate dehydrogenase 1 (soluble)
chr15	99618559	99619823	+	99618559	99619816	A3SS	0.5	50	50	ENSMUST00000023760.13	ENSMUSG00000023019.13	Gpd1	chr15	protein_coding	glycerol-3-phosphate dehydrogenase 1 (soluble)
chr15	99623729	99625216	+	99623729	99625526	A3SS	0.5	50	50	ENSMUST00000023761.4	ENSMUSG00000023020.4	Cox14	chr15	protein_coding	cytochrome c oxidase assembly protein 14
chr15	99634317	99636546	-	99634317;99635534	99635428;99636546	ES	0.5	50	50	ENSMUST00000109035.11	ENSMUSG00000023021.16	Cers5	chr15	protein_coding	ceramide synthase 5
chr15	99637393	99638825	-	99637393;99637611	99637483;99638825	ES	0.5	50	50	ENSMUST00000109035.11	ENSMUSG00000023021.16	Cers5	chr15	protein_coding	ceramide synthase 5
chr15	99649222	99670556	-	99649222	99670064	5pMXE	0.33	50	50	ENSMUST00000109035.11	ENSMUSG00000023021.16	Cers5	chr15	protein_coding	ceramide synthase 5
chr15	99636611	99637287	-	99636702	99637287	A3SS	0.5	50	50	ENSMUST00000109035.11	ENSMUSG00000023021.16	Cers5	chr15	protein_coding	ceramide synthase 5
chr15	99649222	99669769	-	99649222	99670064	A5SS	0.33	50	50	ENSMUST00000109035.11	ENSMUSG00000023021.16	Cers5	chr15	protein_coding	ceramide synthase 5
chr15	99639540	99643770	-	99637611	99643770	A3SS	0.5	50	50	ENSMUST00000176248.8	ENSMUSG00000023021.16	Cers5	chr15	protein_coding	ceramide synthase 5
chr15	99637393	99638825	-	99637393	99637483	A5SS&ES	0.5	50	50	ENSMUST00000176248.8	ENSMUSG00000023021.16	Cers5	chr15	protein_coding	ceramide synthase 5
chr15	99637611	99638825	-	99637611	99643770	A5SS	0.5	50	50	ENSMUST00000176248.8	ENSMUSG00000023021.16	Cers5	chr15	protein_coding	ceramide synthase 5
chr15	99634317	99636546	-	99635534	99636546	3pMXE	0.5	50	50	ENSMUST00000176970.8	ENSMUSG00000023021.16	Cers5	chr15	protein_coding	ceramide synthase 5
chr15	99637393;99637611	99637483;99643770	-	99637393;99639540	99638825;99643770	MXE	0.5	100	100	ENSMUST00000176970.8	ENSMUSG00000023021.16	Cers5	chr15	protein_coding	ceramide synthase 5
chr15	99649222	99669769	-	99649222	99670556	A5SS	0.33	50	50	ENSMUST00000175876.8	ENSMUSG00000023021.16	Cers5	chr15	protein_coding	ceramide synthase 5
chr15	99741704	99772464	-	99741704	99773214	A5SS	0.5	50	50	ENSMUST00000073691.5	ENSMUSG00000023022.15	Lima1	chr15	protein_coding	LIM domain and actin binding 1
chr15	99827859	99831400	-	99827859	99829373	5pMXE	0.5	50	50	ENSMUST00000062631.15	ENSMUSG00000045350.16	Fam186a	chr15	protein_coding	family with sequence similarity 186, member A
chr15	99832799	99850366	+	99831495	99850366	A5SS	0.5	50	50	ENSMUST00000180309.2	ENSMUSG00000096111.8	Gm21917	chr15	lncRNA	predicted gene, 21917
chr15	99870864	99882798	+	99868159	99882798	A5SS	0.5	50	50	ENSMUST00000057632.16	ENSMUSG00000023025.17	Larp4	chr15	protein_coding	La ribonucleoprotein domain family, member 4
chr15	99884086	99891204	+	99889709	99891204	A5SS&ES	0.5	50	50	ENSMUST00000057632.16	ENSMUSG00000023025.17	Larp4	chr15	protein_coding	La ribonucleoprotein domain family, member 4
chr15	99870864	99882798	+	99870864	99882801	A3SS	0.33	50	50	ENSMUST00000100206.4	ENSMUSG00000023025.17	Larp4	chr15	protein_coding	La ribonucleoprotein domain family, member 4
chr15	99870864	99882814	+	99870864	99882801	A3SS	0.33	50	50	ENSMUST00000100206.4	ENSMUSG00000023025.17	Larp4	chr15	protein_coding	La ribonucleoprotein domain family, member 4
chr15	99870864	99882814	+	99870864	99882798	A3SS	0.33	50	50	ENSMUST00000230956.2	ENSMUSG00000023025.17	Larp4	chr15	protein_coding	La ribonucleoprotein domain family, member 4
chr15	100052425	100052915	+	100052187	100052915	A5SS	0.5	50	50	ENSMUST00000100203.10	ENSMUSG00000023026.17	Dip2b	chr15	protein_coding	disco interacting protein 2 homolog B
chr15	100053034	100055051	+	100053037	100055051	A5SS	0.5	50	50	ENSMUST00000100203.10	ENSMUSG00000023026.17	Dip2b	chr15	protein_coding	disco interacting protein 2 homolog B
chr15	100130712	100149950	+	100130712;100143226	100143126;100149950	ES	0.5	50	50	ENSMUST00000023769.11	ENSMUSG00000023027.14	Atf1	chr15	protein_coding	activating transcription factor 1
chr15	100130712	100143113	+	100130712	100143126	A3SS	0.25	50	50	ENSMUST00000023769.11	ENSMUSG00000023027.14	Atf1	chr15	protein_coding	activating transcription factor 1
chr15	100152394	100157701	+	100152394	100157696	A3SS	0.5	50	50	ENSMUST00000023769.11	ENSMUSG00000023027.14	Atf1	chr15	protein_coding	activating transcription factor 1
chr15	100126486	100130614	+	100125963	100130614	A5SS	0.25	50	50	ENSMUST00000023769.11	ENSMUSG00000023027.14	Atf1	chr15	protein_coding	activating transcription factor 1
chr15	100130140	100130614	+	100125963	100130614	A5SS	0.25	50	50	ENSMUST00000023769.11	ENSMUSG00000023027.14	Atf1	chr15	protein_coding	activating transcription factor 1
chr15	100130196	100130614	+	100125963	100130614	A5SS	0.25	50	50	ENSMUST00000023769.11	ENSMUSG00000023027.14	Atf1	chr15	protein_coding	activating transcription factor 1
chr15	100130712	100149950	+	100130712;100143226	100143113;100149950	ES	0.5	50	50	ENSMUST00000163855.8	ENSMUSG00000023027.14	Atf1	chr15	protein_coding	activating transcription factor 1
chr15	100130140	100130614	+	100126486	100130614	A5SS	0.25	50	50	ENSMUST00000171869.3	ENSMUSG00000023027.14	Atf1	chr15	protein_coding	activating transcription factor 1
chr15	100130196	100130614	+	100126486	100130614	A5SS	0.25	50	50	ENSMUST00000171869.3	ENSMUSG00000023027.14	Atf1	chr15	protein_coding	activating transcription factor 1
chr15	100130140	100130614	+	100130196	100130614	A5SS	0.25	50	50	ENSMUST00000165804.8	ENSMUSG00000023027.14	Atf1	chr15	protein_coding	activating transcription factor 1
chr15	100130712;100150080	100149950;100151975	+	100130712	100151975	cassetteExon	0.5	100	100	ENSMUST00000169408.8	ENSMUSG00000023027.14	Atf1	chr15	protein_coding	activating transcription factor 1
chr15	100130712	100143113	+	100130712	100151975	A3SS	0.25	50	50	ENSMUST00000169408.8	ENSMUSG00000023027.14	Atf1	chr15	protein_coding	activating transcription factor 1
chr15	100130712	100143126	+	100130712	100151975	A3SS	0.25	50	50	ENSMUST00000169408.8	ENSMUSG00000023027.14	Atf1	chr15	protein_coding	activating transcription factor 1
chr15	100203225	100226099	+	100203225	100210875	3pMXE	0.33	50	50	ENSMUST00000230472.2	ENSMUSG00000054619.8	Mettl7a1	chr15	protein_coding	methyltransferase like 7A1
chr15	100203225;100207785	100207705;100210875	+	100203225	100210875	cassetteExon	0.5	100	100	ENSMUST00000230472.2	ENSMUSG00000054619.8	Mettl7a1	chr15	protein_coding	methyltransferase like 7A1
chr15	100202143	100202851	+	100202143	100202804	A3SS	0.33	50	50	ENSMUST00000230472.2	ENSMUSG00000054619.8	Mettl7a1	chr15	protein_coding	methyltransferase like 7A1
chr15	100202143	100202878	+	100202143	100202804	A3SS	0.33	50	50	ENSMUST00000230472.2	ENSMUSG00000054619.8	Mettl7a1	chr15	protein_coding	methyltransferase like 7A1
chr15	100202143	100202851	+	100202143	100202878	A3SS	0.33	50	50	ENSMUST00000229574.2	ENSMUSG00000054619.8	Mettl7a1	chr15	protein_coding	methyltransferase like 7A1
chr15	100203225	100207705	+	100203225	100226099	A3SS	0.33	50	50	ENSMUST00000229588.2	ENSMUSG00000054619.8	Mettl7a1	chr15	protein_coding	methyltransferase like 7A1
chr15	100251588	100272760	+	100251588;100263241	100263145;100272760	ES	0.5	50	50	ENSMUST00000075675.7	ENSMUSG00000093789.4	Methig1	chr15	protein_coding	methyltransferase hypoxia inducible domain containing 1
chr15	100251588	100258430	+	100251588	100263145	A3SS	0.33	50	50	ENSMUST00000075675.7	ENSMUSG00000093789.4	Methig1	chr15	protein_coding	methyltransferase hypoxia inducible domain containing 1
chr15	100262510	100263145	+	100251588	100263145	A5SS	0.33	50	50	ENSMUST00000075675.7	ENSMUSG00000093789.4	Methig1	chr15	protein_coding	methyltransferase hypoxia inducible domain containing 1
chr15	100262652	100263145	+	100251588	100263145	A5SS	0.33	50	50	ENSMUST00000075675.7	ENSMUSG00000093789.4	Methig1	chr15	protein_coding	methyltransferase hypoxia inducible domain containing 1
chr15	100251588	100258430	+	100251588	100272760	A3SS	0.33	50	50	ENSMUST00000175929.2	ENSMUSG00000093789.4	Methig1	chr15	protein_coding	methyltransferase hypoxia inducible domain containing 1
chr15	100262510	100263145	+	100262510;100262652	100262599;100263145	ES	0.5	50	50	ENSMUST00000175683.8	ENSMUSG00000093550.8	Higd1c	chr15	protein_coding	HIG1 domain family, member 1C
chr15	100310143	100321777	-	100310143	100320843	5pMXE	0.25	50	50	ENSMUST00000023774.12	ENSMUSG00000023030.17	Slc11a2	chr15	protein_coding	solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2
chr15	100310143	100321985	-	100310143	100320843	5pMXE	0.25	50	50	ENSMUST00000023774.12	ENSMUSG00000023030.17	Slc11a2	chr15	protein_coding	solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2
chr15	100310143	100322793	-	100310143	100320843	5pMXE	0.25	50	50	ENSMUST00000023774.12	ENSMUSG00000023030.17	Slc11a2	chr15	protein_coding	solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2
chr15	100308112	100310115	-	100308112	100310072	A5SS	0.5	50	50	ENSMUST00000023774.12	ENSMUSG00000023030.17	Slc11a2	chr15	protein_coding	solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2
chr15	100310143	100321777	-	100310143	100322793	A5SS	0.25	50	50	ENSMUST00000123461.8	ENSMUSG00000023030.17	Slc11a2	chr15	protein_coding	solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2
chr15	100310143	100321985	-	100310143	100322793	A5SS	0.25	50	50	ENSMUST00000123461.8	ENSMUSG00000023030.17	Slc11a2	chr15	protein_coding	solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2
chr15	100310143	100321777	-	100310143	100321985	A5SS	0.25	50	50	ENSMUST00000154331.2	ENSMUSG00000023030.17	Slc11a2	chr15	protein_coding	solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2
chr15	100322125;100324326	100324244;100324847	+	100322125	100324847	cassetteExon	0.5	100	100	ENSMUST00000132119.2	ENSMUSG00000087444.2	Gm5475	chr15	protein_coding	predicted gene 5475
chr15	100367717	100370430	+	100367717;100369656	100369541;100370430	ES	0.5	50	50	ENSMUST00000037001.10	ENSMUSG00000037353.10	Letmd1	chr15	protein_coding	LETM1 domain containing 1
chr15	100367019	100367566	+	100367126	100367566	A5SS	0.5	50	50	ENSMUST00000037001.10	ENSMUSG00000037353.10	Letmd1	chr15	protein_coding	LETM1 domain containing 1
chr15	100402324	100404087	-	100396182	100404087	A3SS	0.5	50	50	ENSMUST00000231174.2	ENSMUSG00000009733.10	Tfcp2	chr15	protein_coding	transcription factor CP2
chr15	100407555	100409576	-	100404138	100409576	A3SS	0.5	50	50	ENSMUST00000231174.2	ENSMUSG00000009733.10	Tfcp2	chr15	protein_coding	transcription factor CP2
chr15	100418596	100423448	-	100418596;100420376	100420270;100423448	ES	0.5	50	50	ENSMUST00000229696.2	ENSMUSG00000009733.10	Tfcp2	chr15	protein_coding	transcription factor CP2
chr15	100411046	100411910	-	100411052	100411910	A3SS	0.5	50	50	ENSMUST00000229696.2	ENSMUSG00000009733.10	Tfcp2	chr15	protein_coding	transcription factor CP2
chr15	100446216	100449206	-	100426427	100449206	A3SS	0.33	50	50	ENSMUST00000229696.2	ENSMUSG00000009733.10	Tfcp2	chr15	protein_coding	transcription factor CP2
chr15	100449362	100449457	-	100449362	100449791	A5SS	0.5	50	50	ENSMUST00000229696.2	ENSMUSG00000009733.10	Tfcp2	chr15	protein_coding	transcription factor CP2
chr15	100426427	100449206	-	100423553	100449206	A3SS	0.33	50	50	ENSMUST00000229265.2	ENSMUSG00000009733.10	Tfcp2	chr15	protein_coding	transcription factor CP2
chr15	100446216	100449206	-	100423553	100449206	A3SS	0.33	50	50	ENSMUST00000229265.2	ENSMUSG00000009733.10	Tfcp2	chr15	protein_coding	transcription factor CP2
chr15	100423553	100425758	-	100423553	100449206	A5SS	0.5	50	50	ENSMUST00000229265.2	ENSMUSG00000009733.10	Tfcp2	chr15	protein_coding	transcription factor CP2
chr15	100482040	100484525	-	100482040	100483617	5pMXE	0.33	50	50	ENSMUST00000176271.9	ENSMUSG00000009739.18	Pou6f1	chr15	protein_coding	POU domain, class 6, transcription factor 1
chr15	100482040	100483756	-	100482040	100483617	A5SS	0.33	50	50	ENSMUST00000176271.9	ENSMUSG00000009739.18	Pou6f1	chr15	protein_coding	POU domain, class 6, transcription factor 1
chr15	100485786	100489722	-	100485791	100489722	A3SS	0.33	50	50	ENSMUST00000176140.8	ENSMUSG00000009739.18	Pou6f1	chr15	protein_coding	POU domain, class 6, transcription factor 1
chr15	100486532	100489722	-	100485791	100489722	A3SS	0.33	50	50	ENSMUST00000176140.8	ENSMUSG00000009739.18	Pou6f1	chr15	protein_coding	POU domain, class 6, transcription factor 1
chr15	100482040	100484525	-	100482040;100484009	100483756;100484525	ES	0.5	50	50	ENSMUST00000073837.13	ENSMUSG00000009739.18	Pou6f1	chr15	protein_coding	POU domain, class 6, transcription factor 1
chr15	100484750	100485670	-	100484653	100485670	A3SS	0.5	50	50	ENSMUST00000073837.13	ENSMUSG00000009739.18	Pou6f1	chr15	protein_coding	POU domain, class 6, transcription factor 1
chr15	100486532	100489722	-	100485786	100489722	A3SS	0.33	50	50	ENSMUST00000073837.13	ENSMUSG00000009739.18	Pou6f1	chr15	protein_coding	POU domain, class 6, transcription factor 1
chr15	100482040;100484009	100483617;100484525	-	100482040	100484525	cassetteExon	0.5	100	100	ENSMUST00000176300.8	ENSMUSG00000009739.18	Pou6f1	chr15	protein_coding	POU domain, class 6, transcription factor 1
chr15	100514081	100514794	+	100513605	100514794	A5SS	0.25	50	50	ENSMUST00000000356.10	ENSMUSG00000000346.10	Dazap2	chr15	protein_coding	DAZ associated protein 2
chr15	100514203	100514794	+	100513605	100514794	A5SS	0.25	50	50	ENSMUST00000000356.10	ENSMUSG00000000346.10	Dazap2	chr15	protein_coding	DAZ associated protein 2
chr15	100514588	100514794	+	100513605	100514794	A5SS	0.25	50	50	ENSMUST00000000356.10	ENSMUSG00000000346.10	Dazap2	chr15	protein_coding	DAZ associated protein 2
chr15	100514081	100514794	+	100514203	100514794	A5SS	0.25	50	50	ENSMUST00000230661.2	ENSMUSG00000000346.10	Dazap2	chr15	protein_coding	DAZ associated protein 2
chr15	100514588	100514794	+	100514203	100514794	A5SS	0.25	50	50	ENSMUST00000230661.2	ENSMUSG00000000346.10	Dazap2	chr15	protein_coding	DAZ associated protein 2
chr15	100514588	100514794	+	100514081	100514794	A5SS	0.25	50	50	ENSMUST00000229424.2	ENSMUSG00000000346.10	Dazap2	chr15	protein_coding	DAZ associated protein 2
chr15	100519839	100520510	-	100519907	100520510	A3SS	0.5	50	50	ENSMUST00000066068.7	ENSMUSG00000053559.14	Smagp	chr15	protein_coding	small cell adhesion glycoprotein
chr15	100520590	100533197	-	100520590	100534068	A5SS	0.33	50	50	ENSMUST00000066068.7	ENSMUSG00000053559.14	Smagp	chr15	protein_coding	small cell adhesion glycoprotein
chr15	100520590	100533244	-	100520590	100534068	A5SS	0.33	50	50	ENSMUST00000066068.7	ENSMUSG00000053559.14	Smagp	chr15	protein_coding	small cell adhesion glycoprotein
chr15	100534136	100534630	-	100534136	100534440	A5SS	0.5	50	50	ENSMUST00000066068.7	ENSMUSG00000053559.14	Smagp	chr15	protein_coding	small cell adhesion glycoprotein
chr15	100520590	100533197	-	100520590	100533244	A5SS	0.33	50	50	ENSMUST00000229307.2	ENSMUSG00000053559.14	Smagp	chr15	protein_coding	small cell adhesion glycoprotein
chr15	100550373	100554591	-	100550373;100554171	100554076;100554591	ES	0.5	50	50	ENSMUST00000183211.8	ENSMUSG00000098112.9	Bin2	chr15	protein_coding	bridging integrator 2
chr15	100554995	100567294	-	100554995;100560478	100560398;100567294	ES	0.5	50	50	ENSMUST00000183211.8	ENSMUSG00000098112.9	Bin2	chr15	protein_coding	bridging integrator 2
chr15	100543417	100546961	-	100543420	100546961	A3SS	0.5	50	50	ENSMUST00000183211.8	ENSMUSG00000098112.9	Bin2	chr15	protein_coding	bridging integrator 2
chr15	100548156	100549492	-	100548156	100549840	A5SS	0.5	50	50	ENSMUST00000183211.8	ENSMUSG00000098112.9	Bin2	chr15	protein_coding	bridging integrator 2
chr15	100547043;100560478	100560398;100567294	-	100547043;100554995	100548081;100567294	MXE	0.5	100	100	ENSMUST00000182814.8	ENSMUSG00000098112.9	Bin2	chr15	protein_coding	bridging integrator 2
chr15	100547043;100554171	100554076;100554591	-	100547043;100550373	100548081;100554591	MXE	0.5	100	100	ENSMUST00000182775.8	ENSMUSG00000098112.9	Bin2	chr15	protein_coding	bridging integrator 2
chr15	100554995	100560398	-	100547043	100560398	A3SS	0.5	50	50	ENSMUST00000182068.8	ENSMUSG00000098112.9	Bin2	chr15	protein_coding	bridging integrator 2
chr15	100554995	100567294	-	100560478	100567294	A3SS&ES	0.5	50	50	ENSMUST00000182068.8	ENSMUSG00000098112.9	Bin2	chr15	protein_coding	bridging integrator 2
chr15	100547043	100548081	-	100547043	100560398	A5SS	0.33	50	50	ENSMUST00000182068.8	ENSMUSG00000098112.9	Bin2	chr15	protein_coding	bridging integrator 2
chr15	100547043	100554076	-	100547043	100560398	A5SS	0.33	50	50	ENSMUST00000182068.8	ENSMUSG00000098112.9	Bin2	chr15	protein_coding	bridging integrator 2
chr15	100550373	100554076	-	100547043	100554076	A3SS	0.5	50	50	ENSMUST00000182574.2	ENSMUSG00000098112.9	Bin2	chr15	protein_coding	bridging integrator 2
chr15	100550373	100554591	-	100554171	100554591	A3SS&ES	0.5	50	50	ENSMUST00000182574.2	ENSMUSG00000098112.9	Bin2	chr15	protein_coding	bridging integrator 2
chr15	100547043	100548081	-	100547043	100554076	A5SS	0.33	50	50	ENSMUST00000182574.2	ENSMUSG00000098112.9	Bin2	chr15	protein_coding	bridging integrator 2
chr15	100579169	100580768	-	100579169	100579675	5pMXE	0.33	50	50	ENSMUST00000230572.2	ENSMUSG00000023031.9	Cela1	chr15	protein_coding	chymotrypsin-like elastase family, member 1
chr15	100579169	100580935	-	100579169	100579675	5pMXE	0.33	50	50	ENSMUST00000230572.2	ENSMUSG00000023031.9	Cela1	chr15	protein_coding	chymotrypsin-like elastase family, member 1
chr15	100573354;100576655	100576525;100579024	-	100573354	100579024	cassetteExon	0.5	100	100	ENSMUST00000230572.2	ENSMUSG00000023031.9	Cela1	chr15	protein_coding	chymotrypsin-like elastase family, member 1
chr15	100573354	100576884	-	100573354	100579024	A5SS	0.33	50	50	ENSMUST00000230572.2	ENSMUSG00000023031.9	Cela1	chr15	protein_coding	chymotrypsin-like elastase family, member 1
chr15	100579169	100580935	-	100579169	100580768	A5SS&ES	0.33	50	50	ENSMUST00000023775.9	ENSMUSG00000023031.9	Cela1	chr15	protein_coding	chymotrypsin-like elastase family, member 1
chr15	100573354	100576884	-	100573354	100576525	5pMXE	0.33	50	50	ENSMUST00000229869.2	ENSMUSG00000023031.9	Cela1	chr15	protein_coding	chymotrypsin-like elastase family, member 1
chr15	100573354	100579024	-	100573354	100576525	5pMXE	0.33	50	50	ENSMUST00000229869.2	ENSMUSG00000023031.9	Cela1	chr15	protein_coding	chymotrypsin-like elastase family, member 1
chr15	100573354	100579024	-	100576655	100579024	3pMXE	0.5	50	50	ENSMUST00000230312.2	ENSMUSG00000023031.9	Cela1	chr15	protein_coding	chymotrypsin-like elastase family, member 1
chr15	100618116	100618288	-	100618116	100627188	A5SS	0.33	50	50	ENSMUST00000159715.8	ENSMUSG00000037280.13	Galnt6	chr15	protein_coding	polypeptide N-acetylgalactosaminyltransferase 6
chr15	100618116	100627184	-	100618116	100627188	A5SS	0.33	50	50	ENSMUST00000159715.8	ENSMUSG00000037280.13	Galnt6	chr15	protein_coding	polypeptide N-acetylgalactosaminyltransferase 6
chr15	100618116	100618288	-	100618116	100627184	A5SS	0.33	50	50	ENSMUST00000052069.12	ENSMUSG00000037280.13	Galnt6	chr15	protein_coding	polypeptide N-acetylgalactosaminyltransferase 6
chr15	100593786	100601275	+	100593786	100596033	3pMXE	0.33	50	50	ENSMUST00000229209.2	ENSMUSG00000090062.3	Galnt6os	chr15	lncRNA	polypeptide N-acetylgalactosaminyltransferase 6, opposite strand
chr15	100593786	100593944	+	100593786	100596033	A3SS	0.33	50	50	ENSMUST00000229209.2	ENSMUSG00000090062.3	Galnt6os	chr15	lncRNA	polypeptide N-acetylgalactosaminyltransferase 6, opposite strand
chr15	100593786	100593944	+	100593786	100601275	A3SS	0.33	50	50	ENSMUST00000229410.2	ENSMUSG00000090062.3	Galnt6os	chr15	lncRNA	polypeptide N-acetylgalactosaminyltransferase 6, opposite strand
chr15	100628765;100629363	100629056;100630245	-	100628765	100630245	cassetteExon	0.5	100	100	ENSMUST00000231090.2	ENSMUSG00000116504.2	I730030J21Rik	chr15	lncRNA	RIKEN cDNA I730030J21 gene
chr15	100672592	100672709	+	100672592	100680827	A3SS	0.5	50	50	ENSMUST00000023776.13	ENSMUSG00000023032.13	Slc4a8	chr15	protein_coding	solute carrier family 4 (anion exchanger), member 8
chr15	100679219	100680827	+	100672592	100680827	A5SS	0.5	50	50	ENSMUST00000023776.13	ENSMUSG00000023032.13	Slc4a8	chr15	protein_coding	solute carrier family 4 (anion exchanger), member 8
chr15	100710259	100710988	+	100709555	100710988	A5SS	0.5	50	50	ENSMUST00000023776.13	ENSMUSG00000023032.13	Slc4a8	chr15	protein_coding	solute carrier family 4 (anion exchanger), member 8
chr15	100768214;100797422	100797273;100834152	+	100768214	100834152	cassetteExon	0.5	100	100	ENSMUST00000202527.4	ENSMUSG00000023033.15	Scn8a	chr15	protein_coding	sodium channel, voltage-gated, type VIII, alpha
chr15	100768624	100834152	+	100768214	100834152	A5SS	0.16	50	50	ENSMUST00000202527.4	ENSMUSG00000023033.15	Scn8a	chr15	protein_coding	sodium channel, voltage-gated, type VIII, alpha
chr15	100768949	100834152	+	100768214	100834152	A5SS	0.16	50	50	ENSMUST00000202527.4	ENSMUSG00000023033.15	Scn8a	chr15	protein_coding	sodium channel, voltage-gated, type VIII, alpha
chr15	100769565	100834152	+	100768214	100834152	A5SS	0.16	50	50	ENSMUST00000202527.4	ENSMUSG00000023033.15	Scn8a	chr15	protein_coding	sodium channel, voltage-gated, type VIII, alpha
chr15	100831376	100834152	+	100768214	100834152	A5SS	0.16	50	50	ENSMUST00000202527.4	ENSMUSG00000023033.15	Scn8a	chr15	protein_coding	sodium channel, voltage-gated, type VIII, alpha
chr15	100768624	100797273	+	100768214	100797273	A5SS	0.5	50	50	ENSMUST00000201484.4	ENSMUSG00000023033.15	Scn8a	chr15	protein_coding	sodium channel, voltage-gated, type VIII, alpha
chr15	100768624	100834152	+	100797422	100834152	A5SS&ES	0.16	50	50	ENSMUST00000201484.4	ENSMUSG00000023033.15	Scn8a	chr15	protein_coding	sodium channel, voltage-gated, type VIII, alpha
chr15	100768949	100834152	+	100797422	100834152	A5SS&ES	0.16	50	50	ENSMUST00000201484.4	ENSMUSG00000023033.15	Scn8a	chr15	protein_coding	sodium channel, voltage-gated, type VIII, alpha
chr15	100769565	100834152	+	100797422	100834152	A5SS&ES	0.16	50	50	ENSMUST00000201484.4	ENSMUSG00000023033.15	Scn8a	chr15	protein_coding	sodium channel, voltage-gated, type VIII, alpha
chr15	100831376	100834152	+	100797422	100834152	A5SS	0.16	50	50	ENSMUST00000201484.4	ENSMUSG00000023033.15	Scn8a	chr15	protein_coding	sodium channel, voltage-gated, type VIII, alpha
chr15	100768624;100797422	100797273;100834152	+	100768624	100834152	cassetteExon	0.5	100	100	ENSMUST00000201518.4	ENSMUSG00000023033.15	Scn8a	chr15	protein_coding	sodium channel, voltage-gated, type VIII, alpha
chr15	100855470;100857575	100857484;100866902	+	100855470;100857312	100857221;100866902	MXE	0.5	100	100	ENSMUST00000201518.4	ENSMUSG00000023033.15	Scn8a	chr15	protein_coding	sodium channel, voltage-gated, type VIII, alpha
chr15	100834481	100838005	+	100834481	100853291	A3SS	0.33	50	50	ENSMUST00000201518.4	ENSMUSG00000023033.15	Scn8a	chr15	protein_coding	sodium channel, voltage-gated, type VIII, alpha
chr15	100834481	100838011	+	100834481	100853291	A3SS	0.33	50	50	ENSMUST00000201518.4	ENSMUSG00000023033.15	Scn8a	chr15	protein_coding	sodium channel, voltage-gated, type VIII, alpha
chr15	100857312	100857576	+	100857312	100866902	A3SS	0.5	50	50	ENSMUST00000201518.4	ENSMUSG00000023033.15	Scn8a	chr15	protein_coding	sodium channel, voltage-gated, type VIII, alpha
chr15	100768949	100834152	+	100768624	100834152	A5SS	0.16	50	50	ENSMUST00000201518.4	ENSMUSG00000023033.15	Scn8a	chr15	protein_coding	sodium channel, voltage-gated, type VIII, alpha
chr15	100769565	100834152	+	100768624	100834152	A5SS	0.16	50	50	ENSMUST00000201518.4	ENSMUSG00000023033.15	Scn8a	chr15	protein_coding	sodium channel, voltage-gated, type VIII, alpha
chr15	100831376	100834152	+	100768624	100834152	A5SS	0.16	50	50	ENSMUST00000201518.4	ENSMUSG00000023033.15	Scn8a	chr15	protein_coding	sodium channel, voltage-gated, type VIII, alpha
chr15	100881956	100899915	+	100881926	100899915	A5SS	0.5	50	50	ENSMUST00000201518.4	ENSMUSG00000023033.15	Scn8a	chr15	protein_coding	sodium channel, voltage-gated, type VIII, alpha
chr15	100916405	100927459	+	100916405;100922264	100922142;100927459	ES	0.33	50	50	ENSMUST00000082209.13	ENSMUSG00000023033.15	Scn8a	chr15	protein_coding	sodium channel, voltage-gated, type VIII, alpha
chr15	100916405;100921787	100921720;100927459	+	100916405;100922264	100922142;100927459	MXE	0.5	100	100	ENSMUST00000082209.13	ENSMUSG00000023033.15	Scn8a	chr15	protein_coding	sodium channel, voltage-gated, type VIII, alpha
chr15	100769565	100834152	+	100768949	100834152	A5SS	0.16	50	50	ENSMUST00000108909.9	ENSMUSG00000023033.15	Scn8a	chr15	protein_coding	sodium channel, voltage-gated, type VIII, alpha
chr15	100831376	100834152	+	100768949	100834152	A5SS	0.16	50	50	ENSMUST00000108909.9	ENSMUSG00000023033.15	Scn8a	chr15	protein_coding	sodium channel, voltage-gated, type VIII, alpha
chr15	100831376	100834152	+	100769565	100834152	A5SS	0.16	50	50	ENSMUST00000202071.2	ENSMUSG00000023033.15	Scn8a	chr15	protein_coding	sodium channel, voltage-gated, type VIII, alpha
chr15	100834481	100838011	+	100834481	100838005	A3SS	0.33	50	50	ENSMUST00000096198.10	ENSMUSG00000023033.15	Scn8a	chr15	protein_coding	sodium channel, voltage-gated, type VIII, alpha
chr15	100916405;100921787	100921720;100927459	+	100916405	100927459	cassetteExon	0.5	100	100	ENSMUST00000200963.4	ENSMUSG00000023033.15	Scn8a	chr15	protein_coding	sodium channel, voltage-gated, type VIII, alpha
chr15	100855470	100857484	+	100855470	100857221	A3SS&ES	0.5	50	50	ENSMUST00000201438.4	ENSMUSG00000023033.15	Scn8a	chr15	protein_coding	sodium channel, voltage-gated, type VIII, alpha
chr15	101014587	101016881	+	101014587;101014906	101014766;101016881	ES	0.33	50	50	ENSMUST00000070875.8	ENSMUSG00000047034.11	Ankrd33	chr15	protein_coding	ankyrin repeat domain 33
chr15	101013783;101014185	101013996;101014458	+	101013783	101014458	cassetteExon	0.5	100	100	ENSMUST00000070875.8	ENSMUSG00000047034.11	Ankrd33	chr15	protein_coding	ankyrin repeat domain 33
chr15	101013783;101014229	101013996;101014458	+	101013783	101014458	cassetteExon	0.5	100	100	ENSMUST00000070875.8	ENSMUSG00000047034.11	Ankrd33	chr15	protein_coding	ankyrin repeat domain 33
chr15	101013783;101014185	101014091;101014458	+	101013783	101014458	cassetteExon	0.5	100	100	ENSMUST00000070875.8	ENSMUSG00000047034.11	Ankrd33	chr15	protein_coding	ankyrin repeat domain 33
chr15	101013783;101014229	101014091;101014458	+	101013783	101014458	cassetteExon	0.5	100	100	ENSMUST00000070875.8	ENSMUSG00000047034.11	Ankrd33	chr15	protein_coding	ankyrin repeat domain 33
chr15	101014920	101016881	+	101014906	101016881	A5SS	0.33	50	50	ENSMUST00000070875.8	ENSMUSG00000047034.11	Ankrd33	chr15	protein_coding	ankyrin repeat domain 33
chr15	101014587	101016881	+	101014587;101014920	101014766;101016881	ES	0.33	50	50	ENSMUST00000229263.2	ENSMUSG00000047034.11	Ankrd33	chr15	protein_coding	ankyrin repeat domain 33
chr15	101013783	101014091	+	101013783	101013996	A3SS	0.33	50	50	ENSMUST00000229263.2	ENSMUSG00000047034.11	Ankrd33	chr15	protein_coding	ankyrin repeat domain 33
chr15	101013783	101014458	+	101013783	101013996	A3SS&ES	0.33	50	50	ENSMUST00000229263.2	ENSMUSG00000047034.11	Ankrd33	chr15	protein_coding	ankyrin repeat domain 33
chr15	101014229	101014458	+	101014229	101014462	A3SS	0.5	50	50	ENSMUST00000229263.2	ENSMUSG00000047034.11	Ankrd33	chr15	protein_coding	ankyrin repeat domain 33
chr15	101014587	101016881	+	101014587	101014766	3pMXE	0.5	50	50	ENSMUST00000231158.2	ENSMUSG00000047034.11	Ankrd33	chr15	protein_coding	ankyrin repeat domain 33
chr15	101014229	101014458	+	101014185	101014458	A5SS	0.33	50	50	ENSMUST00000231158.2	ENSMUSG00000047034.11	Ankrd33	chr15	protein_coding	ankyrin repeat domain 33
chr15	101026944;101032078	101032018;101032488	+	101026944	101032488	cassetteExon	0.5	100	100	ENSMUST00000000542.14	ENSMUSG00000000530.17	Acvrl1	chr15	protein_coding	activin A receptor, type II-like 1
chr15	101026944	101027846	+	101026944	101032488	A3SS	0.16	50	50	ENSMUST00000000542.14	ENSMUSG00000000530.17	Acvrl1	chr15	protein_coding	activin A receptor, type II-like 1
chr15	101026944	101029224	+	101026944	101032488	A3SS	0.16	50	50	ENSMUST00000000542.14	ENSMUSG00000000530.17	Acvrl1	chr15	protein_coding	activin A receptor, type II-like 1
chr15	101026944	101032526	+	101026944	101032488	A3SS	0.16	50	50	ENSMUST00000000542.14	ENSMUSG00000000530.17	Acvrl1	chr15	protein_coding	activin A receptor, type II-like 1
chr15	101026944	101032557	+	101026944	101032488	A3SS	0.16	50	50	ENSMUST00000000542.14	ENSMUSG00000000530.17	Acvrl1	chr15	protein_coding	activin A receptor, type II-like 1
chr15	101039078	101040338	+	101039078	101041224	A3SS	0.5	50	50	ENSMUST00000000542.14	ENSMUSG00000000530.17	Acvrl1	chr15	protein_coding	activin A receptor, type II-like 1
chr15	101026944	101032557	+	101026944;101029352	101029224;101032557	ES	0.25	50	50	ENSMUST00000144229.8	ENSMUSG00000000530.17	Acvrl1	chr15	protein_coding	activin A receptor, type II-like 1
chr15	101026944;101027932	101027846;101032557	+	101026944;101029352	101029224;101032557	MXE	0.5	100	100	ENSMUST00000144229.8	ENSMUSG00000000530.17	Acvrl1	chr15	protein_coding	activin A receptor, type II-like 1
chr15	101026944	101032018	+	101026944	101029224	A3SS&ES	0.16	50	50	ENSMUST00000144229.8	ENSMUSG00000000530.17	Acvrl1	chr15	protein_coding	activin A receptor, type II-like 1
chr15	101026944	101032526	+	101026944	101029224	A3SS&ES	0.16	50	50	ENSMUST00000144229.8	ENSMUSG00000000530.17	Acvrl1	chr15	protein_coding	activin A receptor, type II-like 1
chr15	101031374	101032557	+	101029352	101032557	A5SS	0.25	50	50	ENSMUST00000144229.8	ENSMUSG00000000530.17	Acvrl1	chr15	protein_coding	activin A receptor, type II-like 1
chr15	101026944	101032526	+	101026944;101027932	101027846;101032526	ES	0.33	50	50	ENSMUST00000130432.8	ENSMUSG00000000530.17	Acvrl1	chr15	protein_coding	activin A receptor, type II-like 1
chr15	101026944;101032078	101032018;101032526	+	101026944;101027932	101027846;101032526	MXE	0.5	100	100	ENSMUST00000130432.8	ENSMUSG00000000530.17	Acvrl1	chr15	protein_coding	activin A receptor, type II-like 1
chr15	101026944	101029224	+	101026944	101027846	A3SS&ES	0.16	50	50	ENSMUST00000130432.8	ENSMUSG00000000530.17	Acvrl1	chr15	protein_coding	activin A receptor, type II-like 1
chr15	101026944	101032557	+	101026944	101027846	A3SS&ES	0.16	50	50	ENSMUST00000130432.8	ENSMUSG00000000530.17	Acvrl1	chr15	protein_coding	activin A receptor, type II-like 1
chr15	101027932	101032557	+	101027932	101032526	A3SS	0.5	50	50	ENSMUST00000130432.8	ENSMUSG00000000530.17	Acvrl1	chr15	protein_coding	activin A receptor, type II-like 1
chr15	101026944	101032557	+	101026944;101027932	101027846;101032557	ES	0.25	50	50	ENSMUST00000120028.8	ENSMUSG00000000530.17	Acvrl1	chr15	protein_coding	activin A receptor, type II-like 1
chr15	101026944	101032018	+	101026944	101027846	A3SS&ES	0.16	50	50	ENSMUST00000120028.8	ENSMUSG00000000530.17	Acvrl1	chr15	protein_coding	activin A receptor, type II-like 1
chr15	101026944	101032526	+	101026944	101027846	A3SS&ES	0.16	50	50	ENSMUST00000120028.8	ENSMUSG00000000530.17	Acvrl1	chr15	protein_coding	activin A receptor, type II-like 1
chr15	101031374	101032557	+	101027932	101032557	A5SS	0.25	50	50	ENSMUST00000120028.8	ENSMUSG00000000530.17	Acvrl1	chr15	protein_coding	activin A receptor, type II-like 1
chr15	101026944;101032078	101032018;101032526	+	101026944	101032526	cassetteExon	0.5	100	100	ENSMUST00000117984.8	ENSMUSG00000000530.17	Acvrl1	chr15	protein_coding	activin A receptor, type II-like 1
chr15	101026944	101032557	+	101026944	101032526	A3SS	0.16	50	50	ENSMUST00000117984.8	ENSMUSG00000000530.17	Acvrl1	chr15	protein_coding	activin A receptor, type II-like 1
chr15	101026944	101032018	+	101026944	101032557	A3SS	0.16	50	50	ENSMUST00000119063.8	ENSMUSG00000000530.17	Acvrl1	chr15	protein_coding	activin A receptor, type II-like 1
chr15	101031374	101032557	+	101026944	101032557	A5SS	0.25	50	50	ENSMUST00000119063.8	ENSMUSG00000000530.17	Acvrl1	chr15	protein_coding	activin A receptor, type II-like 1
chr15	101026944	101032488	+	101026944	101032018	A3SS&ES	0.16	50	50	ENSMUST00000121718.8	ENSMUSG00000000530.17	Acvrl1	chr15	protein_coding	activin A receptor, type II-like 1
chr15	101032078	101032488	+	101032078	101032526	A3SS	0.5	50	50	ENSMUST00000121718.8	ENSMUSG00000000530.17	Acvrl1	chr15	protein_coding	activin A receptor, type II-like 1
chr15	101026944	101032488	+	101032078	101032488	5pMXE	0.5	50	50	ENSMUST00000120754.2	ENSMUSG00000000530.17	Acvrl1	chr15	protein_coding	activin A receptor, type II-like 1
chr15	101121514	101122493	-	101121514	101121758	5pMXE	0.33	50	50	ENSMUST00000180639.3	ENSMUSG00000097915.3	A330009N23Rik	chr15	lncRNA	RIKEN cDNA A330009N23 gene
chr15	101121514	101122855	-	101121514	101121758	5pMXE	0.33	50	50	ENSMUST00000180639.3	ENSMUSG00000097915.3	A330009N23Rik	chr15	lncRNA	RIKEN cDNA A330009N23 gene
chr15	101121514	101122493	-	101121514	101122855	A5SS	0.33	50	50	ENSMUST00000229610.2	ENSMUSG00000097915.3	A330009N23Rik	chr15	lncRNA	RIKEN cDNA A330009N23 gene
chr15	101164852	101167964	+	101156307	101167964	A5SS	0.33	50	50	ENSMUST00000228985.2	ENSMUSG00000023034.8	Nr4a1	chr15	protein_coding	nuclear receptor subfamily 4, group A, member 1
chr15	101166984	101167964	+	101156307	101167964	A5SS	0.33	50	50	ENSMUST00000228985.2	ENSMUSG00000023034.8	Nr4a1	chr15	protein_coding	nuclear receptor subfamily 4, group A, member 1
chr15	101164852	101167964	+	101164852;101166984	101166809;101167964	ES	0.5	50	50	ENSMUST00000230814.2	ENSMUSG00000023034.8	Nr4a1	chr15	protein_coding	nuclear receptor subfamily 4, group A, member 1
chr15	101184691	101184814	+	101182426	101184814	A5SS	0.5	50	50	ENSMUST00000048393.8	ENSMUSG00000037204.8	Atg101	chr15	protein_coding	autophagy related 101
chr15	101251128	101256552	+	101221140	101256552	A5SS	0.5	50	50	ENSMUST00000229584.2	ENSMUSG00000116114.2	Gm35853	chr15	lncRNA	predicted gene, 35853
chr15	101265321	101301320	+	101262322	101301320	A5SS	0.25	50	50	ENSMUST00000229584.2	ENSMUSG00000116114.2	Gm35853	chr15	lncRNA	predicted gene, 35853
chr15	101271284	101301320	+	101262322	101301320	A5SS	0.25	50	50	ENSMUST00000229584.2	ENSMUSG00000116114.2	Gm35853	chr15	lncRNA	predicted gene, 35853
chr15	101274790	101301320	+	101262322	101301320	A5SS	0.25	50	50	ENSMUST00000229584.2	ENSMUSG00000116114.2	Gm35853	chr15	lncRNA	predicted gene, 35853
chr15	101271284	101301320	+	101265321	101301320	A5SS	0.33	50	50	ENSMUST00000229658.2	ENSMUSG00000116114.2	Gm35853	chr15	lncRNA	predicted gene, 35853
chr15	101274790	101301320	+	101265321	101301320	A5SS	0.33	50	50	ENSMUST00000229658.2	ENSMUSG00000116114.2	Gm35853	chr15	lncRNA	predicted gene, 35853
chr15	101274790	101301320	+	101271284	101301320	A5SS	0.25	50	50	ENSMUST00000230887.2	ENSMUSG00000116114.2	Gm35853	chr15	lncRNA	predicted gene, 35853
chr15	101262299	101266203	-	101262299	101265335	5pMXE	0.33	50	50	ENSMUST00000230831.2	ENSMUSG00000037185.10	Krt80	chr15	protein_coding	keratin 80
chr15	101262299	101267636	-	101262299	101265335	5pMXE	0.33	50	50	ENSMUST00000230831.2	ENSMUSG00000037185.10	Krt80	chr15	protein_coding	keratin 80
chr15	101262299	101266203	-	101262299	101267636	A5SS	0.33	50	50	ENSMUST00000077196.6	ENSMUSG00000037185.10	Krt80	chr15	protein_coding	keratin 80
chr15	101309122	101309310	+	101309058	101309310	A5SS	0.5	50	50	ENSMUST00000141190.2	ENSMUSG00000023039.18	Krt7	chr15	protein_coding	keratin 7
chr15	101309122	101309310	+	101309122	101310116	A3SS	0.5	50	50	ENSMUST00000153021.8	ENSMUSG00000023039.18	Krt7	chr15	protein_coding	keratin 7
chr15	101518001	101518097	+	101518001	101518138	A3SS	0.5	50	50	ENSMUST00000231005.2	ENSMUSG00000116129.2	Gm5477	chr15	transcribed_unprocessed_pseudogene	predicted gene 5477
chr15	101518357	101518700	+	101518597	101518700	A5SS	0.5	50	50	ENSMUST00000231005.2	ENSMUSG00000116129.2	Gm5477	chr15	transcribed_unprocessed_pseudogene	predicted gene 5477
chr15	101669922	101670615	-	101669922	101670674	A5SS	0.5	50	50	ENSMUST00000088018.5	ENSMUSG00000067596.5	Krt74	chr15	transcribed_unitary_pseudogene	keratin 74
chr15	101686828	101687088	-	101686828	101688563	A5SS	0.5	50	50	ENSMUST00000071104.6	ENSMUSG00000056605.8	Krt72	chr15	protein_coding	keratin 72
chr15	101844796	101844883	-	101844796	101846261	A5SS	0.5	50	50	ENSMUST00000023799.8	ENSMUSG00000061397.9	Krt79	chr15	protein_coding	keratin 79
chr15	102020728	102020843	+	102020728	102020864	A3SS	0.5	50	50	ENSMUST00000228958.2	ENSMUSG00000037003.17	Tns2	chr15	protein_coding	tensin 2
chr15	102010708	102012965	+	102008987	102012965	A5SS	0.33	50	50	ENSMUST00000228958.2	ENSMUSG00000037003.17	Tns2	chr15	protein_coding	tensin 2
chr15	102011596	102012965	+	102008987	102012965	A5SS	0.33	50	50	ENSMUST00000228958.2	ENSMUSG00000037003.17	Tns2	chr15	protein_coding	tensin 2
chr15	102011596	102012965	+	102010708	102012965	A5SS	0.33	50	50	ENSMUST00000229592.2	ENSMUSG00000037003.17	Tns2	chr15	protein_coding	tensin 2
chr15	102037159	102037279	-	102037159	102038713	A5SS	0.5	50	50	ENSMUST00000139279.8	ENSMUSG00000036966.16	Spryd3	chr15	protein_coding	SPRY domain containing 3
chr15	102066592	102067149	+	102066592;102067034	102066989;102067149	ES	0.5	50	50	ENSMUST00000023806.14	ENSMUSG00000023045.14	Soat2	chr15	protein_coding	sterol O-acyltransferase 2
chr15	102086221	102087216	-	102086221;102087051	102086962;102087216	ES	0.5	50	50	ENSMUST00000023805.3	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102087051	102087396	-	102087051;102087267	102087216;102087396	ES	0.5	50	50	ENSMUST00000023805.3	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102088037	102088406	-	102088037;102088328	102088264;102088406	ES	0.5	50	50	ENSMUST00000023805.3	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102094908	102096001	-	102094908;102095604	102095489;102096001	ES	0.5	50	50	ENSMUST00000023805.3	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102097114	102110879	-	102097114	102097322	5pMXE	0.33	50	50	ENSMUST00000023805.3	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102097114	102112574	-	102097114	102097322	5pMXE	0.33	50	50	ENSMUST00000023805.3	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102094908	102095431	-	102094908	102095489	A5SS	0.25	50	50	ENSMUST00000023805.3	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102095604	102095997	-	102095604	102096001	A5SS	0.5	50	50	ENSMUST00000023805.3	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102086221;102087267	102087216;102087396	-	102086221;102087051	102086962;102087396	MXE	0.5	100	100	ENSMUST00000231029.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102094908	102096442	-	102094908;102096107	102096001;102096442	ES	0.5	50	50	ENSMUST00000230322.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102094908;102095604	102095431;102096001	-	102094908	102096001	cassetteExon	0.5	100	100	ENSMUST00000230322.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102086221	102087216	-	102087051	102087216	3pMXE	0.5	50	50	ENSMUST00000230253.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102088037	102088406	-	102088037	102088264	5pMXE	0.5	50	50	ENSMUST00000230253.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102094908	102095431	-	102094908	102096442	A5SS	0.25	50	50	ENSMUST00000230342.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102094908	102095489	-	102094908	102096442	A5SS	0.25	50	50	ENSMUST00000230342.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102094908;102096743	102096442;102096978	-	102094908;102096107	102095489;102096978	MXE	0.5	100	100	ENSMUST00000229938.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102096107;102096743	102096442;102096978	-	102096107	102096978	cassetteExon	0.5	100	100	ENSMUST00000229938.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102094908	102096001	-	102094908	102095489	A5SS&ES	0.25	50	50	ENSMUST00000229938.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102097114	102112574	-	102097114;102097397	102097322;102112574	ES	0.2	50	50	ENSMUST00000230687.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102097114;102111009	102110879;102112574	-	102097114;102097397	102097322;102112574	MXE	0.5	100	100	ENSMUST00000230687.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102097397;102111009	102110879;102112574	-	102097397	102112574	cassetteExon	0.5	100	100	ENSMUST00000230687.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102097397;102111650	102111572;102112574	-	102097397	102112574	cassetteExon	0.5	100	100	ENSMUST00000230687.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102097397;102111695	102111572;102112574	-	102097397	102112574	cassetteExon	0.5	100	100	ENSMUST00000230687.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102097397	102100452	-	102097397	102112574	A5SS	0.2	50	50	ENSMUST00000230687.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102097397	102112131	-	102097397	102112574	A5SS	0.2	50	50	ENSMUST00000230687.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102094908	102096001	-	102095604	102096001	3pMXE	0.5	50	50	ENSMUST00000229043.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102097114	102110879	-	102097114;102097397	102097322;102110879	ES	0.33	50	50	ENSMUST00000229043.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102097397	102111572	-	102097397;102111009	102110879;102111572	ES	0.5	50	50	ENSMUST00000229043.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102111009	102112574	-	102111009	102111572	5pMXE	0.5	50	50	ENSMUST00000229043.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102109517	102110879	-	102097397	102110879	A3SS	0.33	50	50	ENSMUST00000229043.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102097397	102100452	-	102097397	102110879	A5SS	0.33	50	50	ENSMUST00000229043.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102097114;102111009	102110879;102111572	-	102097114;102097397	102097322;102111572	MXE	0.5	100	100	ENSMUST00000229514.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102097114;102111009	102110879;102112574	-	102097114;102111695	102097322;102112574	MXE	0.5	100	100	ENSMUST00000229514.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102097397;102111009	102110879;102112574	-	102097397;102111695	102111572;102112574	MXE	0.5	100	100	ENSMUST00000229514.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102111650	102112574	-	102111695	102112574	A3SS	0.2	50	50	ENSMUST00000229514.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102097397	102100452	-	102097397	102111572	A5SS	0.2	50	50	ENSMUST00000229514.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102097397	102112131	-	102097397	102111572	A5SS&ES	0.2	50	50	ENSMUST00000229514.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102111695	102112131	-	102111695	102112574	A5SS	0.5	50	50	ENSMUST00000229514.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102094908	102096442	-	102096107	102096442	3pMXE	0.5	50	50	ENSMUST00000229470.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102097397	102112131	-	102097397	102100452	5pMXE	0.2	50	50	ENSMUST00000229470.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102111009	102112574	-	102111009;102111695	102111572;102112574	ES	0.2	50	50	ENSMUST00000231030.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102097397	102112131	-	102097397	102110879	A5SS&ES	0.2	50	50	ENSMUST00000231030.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102109517	102110879	-	102097114	102110879	A3SS	0.33	50	50	ENSMUST00000230656.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102096107	102096978	-	102096743	102096978	3pMXE	0.5	50	50	ENSMUST00000229252.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102097397;102111695	102111572;102112131	-	102097397	102112131	cassetteExon	0.5	100	100	ENSMUST00000229252.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102097114;102111009	102110879;102112574	-	102097114	102112574	cassetteExon	0.5	100	100	ENSMUST00000229345.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102111650	102112574	-	102097114	102112574	A3SS	0.2	50	50	ENSMUST00000229345.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102111695	102112574	-	102097114	102112574	A3SS	0.2	50	50	ENSMUST00000229345.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102097397	102112574	-	102097397	102111572	5pMXE	0.2	50	50	ENSMUST00000230665.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102111009;102111650	102111572;102112574	-	102111009	102112574	cassetteExon	0.5	100	100	ENSMUST00000230895.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102097397	102111572	-	102111009	102111572	3pMXE	0.5	50	50	ENSMUST00000230328.2	ENSMUSG00000023044.3	Csad	chr15	protein_coding	cysteine sulfinic acid decarboxylase
chr15	102112237	102113006	+	102111715	102113006	A5SS	0.5	50	50	ENSMUST00000230600.2	ENSMUSG00000046897.18	Zfp740	chr15	protein_coding	zinc finger protein 740
chr15	102113521	102116206	+	102113521;102113740	102113664;102116206	ES	0.25	50	50	ENSMUST00000118729.8	ENSMUSG00000046897.18	Zfp740	chr15	protein_coding	zinc finger protein 740
chr15	102116796	102117590	+	102116796;102117311	102117188;102117590	ES	0.5	50	50	ENSMUST00000118729.8	ENSMUSG00000046897.18	Zfp740	chr15	protein_coding	zinc finger protein 740
chr15	102116355	102116671	+	102116355	102116707	A3SS	0.5	50	50	ENSMUST00000118729.8	ENSMUSG00000046897.18	Zfp740	chr15	protein_coding	zinc finger protein 740
chr15	102113318	102113664	+	102113521	102113664	A5SS	0.5	50	50	ENSMUST00000118729.8	ENSMUSG00000046897.18	Zfp740	chr15	protein_coding	zinc finger protein 740
chr15	102113318	102116206	+	102113740	102116206	A5SS&ES	0.25	50	50	ENSMUST00000118729.8	ENSMUSG00000046897.18	Zfp740	chr15	protein_coding	zinc finger protein 740
chr15	102113318	102116707	+	102116355	102116707	A5SS&ES	0.5	50	50	ENSMUST00000118729.8	ENSMUSG00000046897.18	Zfp740	chr15	protein_coding	zinc finger protein 740
chr15	102115230	102116206	+	102113740	102116206	A5SS	0.25	50	50	ENSMUST00000118729.8	ENSMUSG00000046897.18	Zfp740	chr15	protein_coding	zinc finger protein 740
chr15	102113318	102116206	+	102113318;102113740	102113664;102116206	ES	0.25	50	50	ENSMUST00000119168.8	ENSMUSG00000046897.18	Zfp740	chr15	protein_coding	zinc finger protein 740
chr15	102113318	102116707	+	102113318	102113664	A3SS&ES	0.33	50	50	ENSMUST00000119168.8	ENSMUSG00000046897.18	Zfp740	chr15	protein_coding	zinc finger protein 740
chr15	102113521	102116206	+	102113740	102116206	A5SS&ES	0.25	50	50	ENSMUST00000119168.8	ENSMUSG00000046897.18	Zfp740	chr15	protein_coding	zinc finger protein 740
chr15	102113318	102116707	+	102113318	102116206	A3SS&ES	0.33	50	50	ENSMUST00000141465.9	ENSMUSG00000046897.18	Zfp740	chr15	protein_coding	zinc finger protein 740
chr15	102113521	102116206	+	102113318	102116206	A5SS	0.25	50	50	ENSMUST00000141465.9	ENSMUSG00000046897.18	Zfp740	chr15	protein_coding	zinc finger protein 740
chr15	102115230	102116206	+	102113318	102116206	A5SS	0.25	50	50	ENSMUST00000141465.9	ENSMUSG00000046897.18	Zfp740	chr15	protein_coding	zinc finger protein 740
chr15	102116796	102117590	+	102116796	102117188	3pMXE	0.5	50	50	ENSMUST00000139960.8	ENSMUSG00000046897.18	Zfp740	chr15	protein_coding	zinc finger protein 740
chr15	102115230	102116206	+	102113521	102116206	A5SS	0.25	50	50	ENSMUST00000139960.8	ENSMUSG00000046897.18	Zfp740	chr15	protein_coding	zinc finger protein 740
chr15	102113318;102116355	102116206;102116707	+	102113318	102116707	cassetteExon	0.5	100	100	ENSMUST00000230867.2	ENSMUSG00000046897.18	Zfp740	chr15	protein_coding	zinc finger protein 740
chr15	102116796	102117590	+	102117311	102117590	A5SS	0.5	50	50	ENSMUST00000119830.3	ENSMUSG00000046897.18	Zfp740	chr15	protein_coding	zinc finger protein 740
chr15	102124702;102125067	102124907;102125327	-	102124702	102125327	cassetteExon	0.5	100	100	ENSMUST00000229440.2	ENSMUSG00000001281.11	Itgb7	chr15	protein_coding	integrin beta 7
chr15	102133194	102140286	-	102133194;102136036	102135833;102140286	ES	0.33	50	50	ENSMUST00000001327.11	ENSMUSG00000001281.11	Itgb7	chr15	protein_coding	integrin beta 7
chr15	102136036;102140114	102140046;102140286	-	102136036	102140286	cassetteExon	0.5	100	100	ENSMUST00000001327.11	ENSMUSG00000001281.11	Itgb7	chr15	protein_coding	integrin beta 7
chr15	102124702	102125327	-	102124702	102124907	5pMXE	0.5	50	50	ENSMUST00000230550.2	ENSMUSG00000001281.11	Itgb7	chr15	protein_coding	integrin beta 7
chr15	102140114	102140286	-	102133194	102140286	A3SS	0.33	50	50	ENSMUST00000230652.2	ENSMUSG00000001281.11	Itgb7	chr15	protein_coding	integrin beta 7
chr15	102161179	102165675	-	102161179;102164974	102164905;102165675	ES	0.5	50	50	ENSMUST00000043172.15	ENSMUSG00000001288.16	Rarg	chr15	protein_coding	retinoic acid receptor, gamma
chr15	102159735	102160854	-	102150419	102160854	A3SS	0.5	50	50	ENSMUST00000043172.15	ENSMUSG00000001288.16	Rarg	chr15	protein_coding	retinoic acid receptor, gamma
chr15	102150419	102151648	-	102150419	102160854	A5SS	0.2	50	50	ENSMUST00000043172.15	ENSMUSG00000001288.16	Rarg	chr15	protein_coding	retinoic acid receptor, gamma
chr15	102150419	102153398	-	102150419	102160854	A5SS	0.2	50	50	ENSMUST00000043172.15	ENSMUSG00000001288.16	Rarg	chr15	protein_coding	retinoic acid receptor, gamma
chr15	102150419	102154495	-	102150419	102160854	A5SS	0.2	50	50	ENSMUST00000043172.15	ENSMUSG00000001288.16	Rarg	chr15	protein_coding	retinoic acid receptor, gamma
chr15	102150419	102158713	-	102150419	102160854	A5SS	0.2	50	50	ENSMUST00000043172.15	ENSMUSG00000001288.16	Rarg	chr15	protein_coding	retinoic acid receptor, gamma
chr15	102150419	102158713	-	102150419	102154495	5pMXE	0.2	50	50	ENSMUST00000063339.14	ENSMUSG00000001288.16	Rarg	chr15	protein_coding	retinoic acid receptor, gamma
chr15	102150419	102151648	-	102150419	102154495	A5SS	0.2	50	50	ENSMUST00000063339.14	ENSMUSG00000001288.16	Rarg	chr15	protein_coding	retinoic acid receptor, gamma
chr15	102150419	102153398	-	102150419	102154495	A5SS	0.2	50	50	ENSMUST00000063339.14	ENSMUSG00000001288.16	Rarg	chr15	protein_coding	retinoic acid receptor, gamma
chr15	102150419	102153398	-	102150419	102151648	5pMXE	0.2	50	50	ENSMUST00000130204.2	ENSMUSG00000001288.16	Rarg	chr15	protein_coding	retinoic acid receptor, gamma
chr15	102150419	102158713	-	102150419	102151648	5pMXE	0.2	50	50	ENSMUST00000130204.2	ENSMUSG00000001288.16	Rarg	chr15	protein_coding	retinoic acid receptor, gamma
chr15	102150419	102158713	-	102150419	102153398	5pMXE	0.2	50	50	ENSMUST00000124224.8	ENSMUSG00000001288.16	Rarg	chr15	protein_coding	retinoic acid receptor, gamma
chr15	102204850	102205141	+	102204850	102205195	A3SS	0.33	50	50	ENSMUST00000064924.6	ENSMUSG00000058290.5	Espl1	chr15	protein_coding	extra spindle pole bodies 1, separase
chr15	102204850	102205166	+	102204850	102205195	A3SS	0.33	50	50	ENSMUST00000064924.6	ENSMUSG00000058290.5	Espl1	chr15	protein_coding	extra spindle pole bodies 1, separase
chr15	102231710	102231885	+	102231705	102231885	A5SS	0.5	50	50	ENSMUST00000064924.6	ENSMUSG00000058290.5	Espl1	chr15	protein_coding	extra spindle pole bodies 1, separase
chr15	102204850	102205141	+	102204850	102205166	A3SS	0.33	50	50	ENSMUST00000230212.2	ENSMUSG00000058290.5	Espl1	chr15	protein_coding	extra spindle pole bodies 1, separase
chr15	102205074	102205166	+	102204850	102205166	A5SS	0.5	50	50	ENSMUST00000230212.2	ENSMUSG00000058290.5	Espl1	chr15	protein_coding	extra spindle pole bodies 1, separase
chr15	102234695	102235253	+	102234695;102234970	102234868;102235253	ES	0.5	50	50	ENSMUST00000166658.8	ENSMUSG00000001289.13	Pfdn5	chr15	protein_coding	prefoldin 5
chr15	102234970	102236957	+	102234970;102235284	102235253;102236957	ES	0.33	50	50	ENSMUST00000166658.8	ENSMUSG00000001289.13	Pfdn5	chr15	protein_coding	prefoldin 5
chr15	102234695	102236957	+	102234695;102235284	102235253;102236957	ES	0.33	50	50	ENSMUST00000062492.11	ENSMUSG00000001289.13	Pfdn5	chr15	protein_coding	prefoldin 5
chr15	102234695;102234970	102234868;102236957	+	102234695;102235284	102235253;102236957	MXE	0.5	100	100	ENSMUST00000062492.11	ENSMUSG00000001289.13	Pfdn5	chr15	protein_coding	prefoldin 5
chr15	102234695	102236957	+	102234695;102235284	102234868;102236957	ES	0.33	50	50	ENSMUST00000168805.8	ENSMUSG00000001289.13	Pfdn5	chr15	protein_coding	prefoldin 5
chr15	102234695	102235253	+	102234695	102234868	A3SS	0.33	50	50	ENSMUST00000168805.8	ENSMUSG00000001289.13	Pfdn5	chr15	protein_coding	prefoldin 5
chr15	102234970	102236957	+	102235284	102236957	A5SS	0.33	50	50	ENSMUST00000168805.8	ENSMUSG00000001289.13	Pfdn5	chr15	protein_coding	prefoldin 5
chr15	102234695;102234970	102234868;102236957	+	102234695	102236957	cassetteExon	0.5	100	100	ENSMUST00000170627.8	ENSMUSG00000001289.13	Pfdn5	chr15	protein_coding	prefoldin 5
chr15	102234695	102236957	+	102234970	102236957	5pMXE	0.33	50	50	ENSMUST00000169637.8	ENSMUSG00000001289.13	Pfdn5	chr15	protein_coding	prefoldin 5
chr15	102234695	102236957	+	102235284	102236957	5pMXE	0.33	50	50	ENSMUST00000165671.8	ENSMUSG00000001289.13	Pfdn5	chr15	protein_coding	prefoldin 5
chr15	102234695	102235253	+	102234970	102235253	5pMXE	0.5	50	50	ENSMUST00000165717.4	ENSMUSG00000001289.13	Pfdn5	chr15	protein_coding	prefoldin 5
chr15	102242796	102245536	+	102242796;102245419	102245267;102245536	ES	0.5	50	50	ENSMUST00000113682.9	ENSMUSG00000001285.13	Myg1	chr15	protein_coding	melanocyte proliferating gene 1
chr15	102245419	102245764	+	102245419;102245658	102245536;102245764	ES	0.5	50	50	ENSMUST00000113682.9	ENSMUSG00000001285.13	Myg1	chr15	protein_coding	melanocyte proliferating gene 1
chr15	102240637	102242617	+	102240637	102242637	A3SS	0.5	50	50	ENSMUST00000113682.9	ENSMUSG00000001285.13	Myg1	chr15	protein_coding	melanocyte proliferating gene 1
chr15	102241153	102242637	+	102240637	102242637	A5SS	0.5	50	50	ENSMUST00000113682.9	ENSMUSG00000001285.13	Myg1	chr15	protein_coding	melanocyte proliferating gene 1
chr15	102242796;102245419	102245267;102245764	+	102242796;102245658	102245536;102245764	MXE	0.5	100	100	ENSMUST00000001331.13	ENSMUSG00000001285.13	Myg1	chr15	protein_coding	melanocyte proliferating gene 1
chr15	102245419	102245764	+	102245419	102245536	3pMXE	0.5	50	50	ENSMUST00000171733.8	ENSMUSG00000001285.13	Myg1	chr15	protein_coding	melanocyte proliferating gene 1
chr15	102242796	102245536	+	102242796	102245267	3pMXE	0.5	50	50	ENSMUST00000164019.2	ENSMUSG00000001285.13	Myg1	chr15	protein_coding	melanocyte proliferating gene 1
chr15	102242796	102245536	+	102245419	102245536	5pMXE	0.5	50	50	ENSMUST00000164961.8	ENSMUSG00000001285.13	Myg1	chr15	protein_coding	melanocyte proliferating gene 1
chr15	102245419	102245764	+	102245658	102245764	5pMXE	0.5	50	50	ENSMUST00000168547.2	ENSMUSG00000001285.13	Myg1	chr15	protein_coding	melanocyte proliferating gene 1
chr15	102246940	102247252	-	102246940;102247160	102247076;102247252	ES	0.5	50	50	ENSMUST00000230812.2	ENSMUSG00000036678.9	Aaas	chr15	protein_coding	achalasia, adrenocortical insufficiency, alacrimia
chr15	102247853	102248199	-	102247853;102248056	102247966;102248199	ES	0.5	50	50	ENSMUST00000230812.2	ENSMUSG00000036678.9	Aaas	chr15	protein_coding	achalasia, adrenocortical insufficiency, alacrimia
chr15	102252667	102254922	-	102252667;102254395	102254012;102254922	ES	0.33	50	50	ENSMUST00000230812.2	ENSMUSG00000036678.9	Aaas	chr15	protein_coding	achalasia, adrenocortical insufficiency, alacrimia
chr15	102254968	102255471	-	102254968;102255204	102255113;102255471	ES	0.5	50	50	ENSMUST00000230812.2	ENSMUSG00000036678.9	Aaas	chr15	protein_coding	achalasia, adrenocortical insufficiency, alacrimia
chr15	102247322	102247760	-	102247688	102247760	A3SS&ES	0.5	50	50	ENSMUST00000230812.2	ENSMUSG00000036678.9	Aaas	chr15	protein_coding	achalasia, adrenocortical insufficiency, alacrimia
chr15	102254110	102254922	-	102254395	102254922	A3SS	0.33	50	50	ENSMUST00000230812.2	ENSMUSG00000036678.9	Aaas	chr15	protein_coding	achalasia, adrenocortical insufficiency, alacrimia
chr15	102252667	102254922	-	102252667;102254110	102254012;102254922	ES	0.33	50	50	ENSMUST00000041208.9	ENSMUSG00000036678.9	Aaas	chr15	protein_coding	achalasia, adrenocortical insufficiency, alacrimia
chr15	102258515	102259059	-	102258515	102258931	A5SS	0.5	50	50	ENSMUST00000041208.9	ENSMUSG00000036678.9	Aaas	chr15	protein_coding	achalasia, adrenocortical insufficiency, alacrimia
chr15	102246940	102247252	-	102247160	102247252	3pMXE	0.5	50	50	ENSMUST00000230239.2	ENSMUSG00000036678.9	Aaas	chr15	protein_coding	achalasia, adrenocortical insufficiency, alacrimia
chr15	102247853	102248199	-	102248056	102248199	3pMXE	0.5	50	50	ENSMUST00000230481.2	ENSMUSG00000036678.9	Aaas	chr15	protein_coding	achalasia, adrenocortical insufficiency, alacrimia
chr15	102267837	102275153	-	102267837	102274649	5pMXE	0.5	50	50	ENSMUST00000078508.7	ENSMUSG00000060284.8	Sp7	chr15	protein_coding	Sp7 transcription factor 7
chr15	102316367	102317593	+	102316367	102316651	3pMXE	0.5	50	50	ENSMUST00000170884.8	ENSMUSG00000001280.14	Sp1	chr15	protein_coding	trans-acting transcription factor 1
chr15	102314857	102316207	+	102314618	102316207	A5SS	0.25	50	50	ENSMUST00000170884.8	ENSMUSG00000001280.14	Sp1	chr15	protein_coding	trans-acting transcription factor 1
chr15	102315278	102316207	+	102314618	102316207	A5SS	0.25	50	50	ENSMUST00000170884.8	ENSMUSG00000001280.14	Sp1	chr15	protein_coding	trans-acting transcription factor 1
chr15	102315850	102316207	+	102314618	102316207	A5SS	0.25	50	50	ENSMUST00000170884.8	ENSMUSG00000001280.14	Sp1	chr15	protein_coding	trans-acting transcription factor 1
chr15	102315278	102316207	+	102314857	102316207	A5SS	0.25	50	50	ENSMUST00000163709.8	ENSMUSG00000001280.14	Sp1	chr15	protein_coding	trans-acting transcription factor 1
chr15	102315850	102316207	+	102314857	102316207	A5SS	0.25	50	50	ENSMUST00000163709.8	ENSMUSG00000001280.14	Sp1	chr15	protein_coding	trans-acting transcription factor 1
chr15	102315850	102316207	+	102315278	102316207	A5SS	0.25	50	50	ENSMUST00000165837.8	ENSMUSG00000001280.14	Sp1	chr15	protein_coding	trans-acting transcription factor 1
chr15	102353957	102354699	+	102353957;102354422	102354240;102354699	ES	0.5	50	50	ENSMUST00000023809.11	ENSMUSG00000023047.12	Amhr2	chr15	protein_coding	anti-Mullerian hormone type 2 receptor
chr15	102361327	102362648	+	102361327;102361603	102361467;102362648	ES	0.33	50	50	ENSMUST00000023809.11	ENSMUSG00000023047.12	Amhr2	chr15	protein_coding	anti-Mullerian hormone type 2 receptor
chr15	102360994	102362648	+	102360994;102361327	102361180;102362648	ES	0.33	50	50	ENSMUST00000229278.2	ENSMUSG00000023047.12	Amhr2	chr15	protein_coding	anti-Mullerian hormone type 2 receptor
chr15	102360994;102361603	102361180;102362648	+	102360994	102362648	cassetteExon	0.5	100	100	ENSMUST00000162893.2	ENSMUSG00000023047.12	Amhr2	chr15	protein_coding	anti-Mullerian hormone type 2 receptor
chr15	102360994	102362648	+	102360994	102361180	3pMXE	0.5	50	50	ENSMUST00000161376.2	ENSMUSG00000023047.12	Amhr2	chr15	protein_coding	anti-Mullerian hormone type 2 receptor
chr15	102367690	102368543	+	102367567	102368543	A5SS	0.33	50	50	ENSMUST00000164938.8	ENSMUSG00000023048.14	Prr13	chr15	protein_coding	proline rich 13
chr15	102368016	102368543	+	102367567	102368543	A5SS	0.33	50	50	ENSMUST00000164938.8	ENSMUSG00000023048.14	Prr13	chr15	protein_coding	proline rich 13
chr15	102367690	102368543	+	102367690;102368016	102367899;102368543	ES	0.5	50	50	ENSMUST00000023810.12	ENSMUSG00000023048.14	Prr13	chr15	protein_coding	proline rich 13
chr15	102367690	102368543	+	102368016	102368543	A5SS	0.33	50	50	ENSMUST00000171245.8	ENSMUSG00000023048.14	Prr13	chr15	protein_coding	proline rich 13
chr15	102392675	102395523	+	102392675;102394475	102394383;102395523	ES	0.25	50	50	ENSMUST00000230129.2	ENSMUSG00000056851.15	Pcbp2	chr15	protein_coding	poly(rC) binding protein 2
chr15	102394475	102396640	+	102394475;102395564	102395523;102396640	ES	0.33	50	50	ENSMUST00000230129.2	ENSMUSG00000056851.15	Pcbp2	chr15	protein_coding	poly(rC) binding protein 2
chr15	102396712	102398187	+	102396712	102397211	3pMXE	0.33	50	50	ENSMUST00000230129.2	ENSMUSG00000056851.15	Pcbp2	chr15	protein_coding	poly(rC) binding protein 2
chr15	102396712	102398190	+	102396712	102397211	3pMXE	0.33	50	50	ENSMUST00000230129.2	ENSMUSG00000056851.15	Pcbp2	chr15	protein_coding	poly(rC) binding protein 2
chr15	102379238	102381720	+	102379238	102381696	A3SS	0.5	50	50	ENSMUST00000230129.2	ENSMUSG00000056851.15	Pcbp2	chr15	protein_coding	poly(rC) binding protein 2
chr15	102391723	102392589	+	102391723	102392601	A3SS	0.5	50	50	ENSMUST00000230129.2	ENSMUSG00000056851.15	Pcbp2	chr15	protein_coding	poly(rC) binding protein 2
chr15	102379572	102381696	+	102379238	102381696	A5SS	0.33	50	50	ENSMUST00000230129.2	ENSMUSG00000056851.15	Pcbp2	chr15	protein_coding	poly(rC) binding protein 2
chr15	102380393	102381696	+	102379238	102381696	A5SS	0.33	50	50	ENSMUST00000230129.2	ENSMUSG00000056851.15	Pcbp2	chr15	protein_coding	poly(rC) binding protein 2
chr15	102382062	102382566	+	102381837	102382566	A5SS	0.5	50	50	ENSMUST00000230129.2	ENSMUSG00000056851.15	Pcbp2	chr15	protein_coding	poly(rC) binding protein 2
chr15	102394387	102395523	+	102394475	102395523	A5SS	0.25	50	50	ENSMUST00000230129.2	ENSMUSG00000056851.15	Pcbp2	chr15	protein_coding	poly(rC) binding protein 2
chr15	102394652	102395523	+	102394475	102395523	A5SS	0.25	50	50	ENSMUST00000230129.2	ENSMUSG00000056851.15	Pcbp2	chr15	protein_coding	poly(rC) binding protein 2
chr15	102396712	102398187	+	102396712;102397249	102397211;102398187	ES	0.5	50	50	ENSMUST00000077037.13	ENSMUSG00000056851.15	Pcbp2	chr15	protein_coding	poly(rC) binding protein 2
chr15	102397249	102398190	+	102397249	102398187	A3SS	0.5	50	50	ENSMUST00000077037.13	ENSMUSG00000056851.15	Pcbp2	chr15	protein_coding	poly(rC) binding protein 2
chr15	102392675	102395523	+	102392675	102394383	3pMXE	0.33	50	50	ENSMUST00000229102.2	ENSMUSG00000056851.15	Pcbp2	chr15	protein_coding	poly(rC) binding protein 2
chr15	102392675	102396640	+	102392675	102394383	3pMXE	0.33	50	50	ENSMUST00000229102.2	ENSMUSG00000056851.15	Pcbp2	chr15	protein_coding	poly(rC) binding protein 2
chr15	102392675	102396640	+	102392675;102395564	102395523;102396640	ES	0.33	50	50	ENSMUST00000229618.2	ENSMUSG00000056851.15	Pcbp2	chr15	protein_coding	poly(rC) binding protein 2
chr15	102392675;102394387	102394383;102395523	+	102392675	102395523	cassetteExon	0.5	100	100	ENSMUST00000229618.2	ENSMUSG00000056851.15	Pcbp2	chr15	protein_coding	poly(rC) binding protein 2
chr15	102392675;102394475	102394383;102396640	+	102392675;102395564	102395523;102396640	MXE	0.5	100	100	ENSMUST00000229618.2	ENSMUSG00000056851.15	Pcbp2	chr15	protein_coding	poly(rC) binding protein 2
chr15	102392675;102394652	102394383;102395523	+	102392675	102395523	cassetteExon	0.5	100	100	ENSMUST00000229618.2	ENSMUSG00000056851.15	Pcbp2	chr15	protein_coding	poly(rC) binding protein 2
chr15	102396712;102397249	102397211;102398190	+	102396712	102398190	cassetteExon	0.5	100	100	ENSMUST00000231089.2	ENSMUSG00000056851.15	Pcbp2	chr15	protein_coding	poly(rC) binding protein 2
chr15	102396712	102398187	+	102396712	102398190	A3SS	0.33	50	50	ENSMUST00000231089.2	ENSMUSG00000056851.15	Pcbp2	chr15	protein_coding	poly(rC) binding protein 2
chr15	102380393	102381696	+	102379572	102381696	A5SS	0.33	50	50	ENSMUST00000229222.2	ENSMUSG00000056851.15	Pcbp2	chr15	protein_coding	poly(rC) binding protein 2
chr15	102394475	102396640	+	102394475	102395523	3pMXE	0.5	50	50	ENSMUST00000229958.2	ENSMUSG00000056851.15	Pcbp2	chr15	protein_coding	poly(rC) binding protein 2
chr15	102392675;102394475	102394383;102396640	+	102392675	102396640	cassetteExon	0.5	100	100	ENSMUST00000229184.2	ENSMUSG00000056851.15	Pcbp2	chr15	protein_coding	poly(rC) binding protein 2
chr15	102392675	102395523	+	102394387	102395523	5pMXE	0.25	50	50	ENSMUST00000229822.2	ENSMUSG00000056851.15	Pcbp2	chr15	protein_coding	poly(rC) binding protein 2
chr15	102394475	102396640	+	102395564	102396640	A5SS&ES	0.5	50	50	ENSMUST00000229822.2	ENSMUSG00000056851.15	Pcbp2	chr15	protein_coding	poly(rC) binding protein 2
chr15	102394652	102395523	+	102394387	102395523	A5SS	0.25	50	50	ENSMUST00000229822.2	ENSMUSG00000056851.15	Pcbp2	chr15	protein_coding	poly(rC) binding protein 2
chr15	102392675	102395523	+	102394475	102395523	5pMXE	0.25	50	50	ENSMUST00000230282.2	ENSMUSG00000056851.15	Pcbp2	chr15	protein_coding	poly(rC) binding protein 2
chr15	102392675	102395523	+	102394652	102395523	5pMXE	0.25	50	50	ENSMUST00000230997.2	ENSMUSG00000056851.15	Pcbp2	chr15	protein_coding	poly(rC) binding protein 2
chr15	102414003;102418440	102418354;102425223	-	102414003	102425223	cassetteExon	0.5	100	100	ENSMUST00000023812.10	ENSMUSG00000023050.10	Map3k12	chr15	protein_coding	mitogen-activated protein kinase kinase kinase 12
chr15	102414003	102416763	-	102414003	102425223	A5SS	0.25	50	50	ENSMUST00000023812.10	ENSMUSG00000023050.10	Map3k12	chr15	protein_coding	mitogen-activated protein kinase kinase kinase 12
chr15	102414003	102417725	-	102414003	102425223	A5SS	0.25	50	50	ENSMUST00000023812.10	ENSMUSG00000023050.10	Map3k12	chr15	protein_coding	mitogen-activated protein kinase kinase kinase 12
chr15	102414003	102418354	-	102414003;102417832	102417725;102418354	ES	0.33	50	50	ENSMUST00000171565.8	ENSMUSG00000023050.10	Map3k12	chr15	protein_coding	mitogen-activated protein kinase kinase kinase 12
chr15	102418440	102425223	-	102418440	102419019	5pMXE	0.33	50	50	ENSMUST00000171565.8	ENSMUSG00000023050.10	Map3k12	chr15	protein_coding	mitogen-activated protein kinase kinase kinase 12
chr15	102418440	102425343	-	102418440	102419019	5pMXE	0.33	50	50	ENSMUST00000171565.8	ENSMUSG00000023050.10	Map3k12	chr15	protein_coding	mitogen-activated protein kinase kinase kinase 12
chr15	102414003;102416898	102416763;102417725	-	102414003	102417725	cassetteExon	0.5	100	100	ENSMUST00000171565.8	ENSMUSG00000023050.10	Map3k12	chr15	protein_coding	mitogen-activated protein kinase kinase kinase 12
chr15	102417813	102418354	-	102417832	102418354	A3SS	0.33	50	50	ENSMUST00000171565.8	ENSMUSG00000023050.10	Map3k12	chr15	protein_coding	mitogen-activated protein kinase kinase kinase 12
chr15	102414003	102418354	-	102414003;102417813	102417725;102418354	ES	0.33	50	50	ENSMUST00000169377.8	ENSMUSG00000023050.10	Map3k12	chr15	protein_coding	mitogen-activated protein kinase kinase kinase 12
chr15	102418440	102425343	-	102418440	102425223	A5SS	0.33	50	50	ENSMUST00000169377.8	ENSMUSG00000023050.10	Map3k12	chr15	protein_coding	mitogen-activated protein kinase kinase kinase 12
chr15	102414003	102416763	-	102414003	102418354	A5SS	0.25	50	50	ENSMUST00000169367.8	ENSMUSG00000023050.10	Map3k12	chr15	protein_coding	mitogen-activated protein kinase kinase kinase 12
chr15	102414003	102418354	-	102417813	102418354	3pMXE	0.33	50	50	ENSMUST00000164343.8	ENSMUSG00000023050.10	Map3k12	chr15	protein_coding	mitogen-activated protein kinase kinase kinase 12
chr15	102427037	102429556	+	102427037;102427726	102427557;102429556	ES	0.33	50	50	ENSMUST00000131184.8	ENSMUSG00000023051.12	Tarbp2	chr15	protein_coding	TARBP2, RISC loading complex RNA binding subunit
chr15	102427037;102429012	102428910;102429556	+	102427037;102427726	102427557;102429556	MXE	0.5	100	100	ENSMUST00000131184.8	ENSMUSG00000023051.12	Tarbp2	chr15	protein_coding	TARBP2, RISC loading complex RNA binding subunit
chr15	102427726;102429012	102428910;102429556	+	102427726	102429556	cassetteExon	0.5	100	100	ENSMUST00000131184.8	ENSMUSG00000023051.12	Tarbp2	chr15	protein_coding	TARBP2, RISC loading complex RNA binding subunit
chr15	102427037	102429573	+	102427037	102427557	A3SS&ES	0.25	50	50	ENSMUST00000131184.8	ENSMUSG00000023051.12	Tarbp2	chr15	protein_coding	TARBP2, RISC loading complex RNA binding subunit
chr15	102427726	102429573	+	102427726	102429556	A3SS	0.33	50	50	ENSMUST00000131184.8	ENSMUSG00000023051.12	Tarbp2	chr15	protein_coding	TARBP2, RISC loading complex RNA binding subunit
chr15	102427279	102427557	+	102427037	102427557	A5SS	0.5	50	50	ENSMUST00000131184.8	ENSMUSG00000023051.12	Tarbp2	chr15	protein_coding	TARBP2, RISC loading complex RNA binding subunit
chr15	102427037	102428910	+	102427037;102427726	102427557;102428910	ES	0.5	50	50	ENSMUST00000141266.8	ENSMUSG00000023051.12	Tarbp2	chr15	protein_coding	TARBP2, RISC loading complex RNA binding subunit
chr15	102427726	102429556	+	102427726	102428910	3pMXE	0.33	50	50	ENSMUST00000141266.8	ENSMUSG00000023051.12	Tarbp2	chr15	protein_coding	TARBP2, RISC loading complex RNA binding subunit
chr15	102427726	102429573	+	102427726	102428910	3pMXE	0.33	50	50	ENSMUST00000141266.8	ENSMUSG00000023051.12	Tarbp2	chr15	protein_coding	TARBP2, RISC loading complex RNA binding subunit
chr15	102427037;102429012	102428910;102429556	+	102427037	102429556	cassetteExon	0.5	100	100	ENSMUST00000100168.10	ENSMUSG00000023051.12	Tarbp2	chr15	protein_coding	TARBP2, RISC loading complex RNA binding subunit
chr15	102427037	102429573	+	102427037	102429556	A3SS	0.25	50	50	ENSMUST00000100168.10	ENSMUSG00000023051.12	Tarbp2	chr15	protein_coding	TARBP2, RISC loading complex RNA binding subunit
chr15	102427037;102427726	102427557;102429573	+	102427037	102429573	cassetteExon	0.5	100	100	ENSMUST00000229805.2	ENSMUSG00000023051.12	Tarbp2	chr15	protein_coding	TARBP2, RISC loading complex RNA binding subunit
chr15	102427037;102429012	102428910;102429573	+	102427037	102429573	cassetteExon	0.5	100	100	ENSMUST00000229805.2	ENSMUSG00000023051.12	Tarbp2	chr15	protein_coding	TARBP2, RISC loading complex RNA binding subunit
chr15	102427037	102429573	+	102427037	102428910	A3SS&ES	0.25	50	50	ENSMUST00000150393.9	ENSMUSG00000023051.12	Tarbp2	chr15	protein_coding	TARBP2, RISC loading complex RNA binding subunit
chr15	102429012	102429573	+	102429012	102429556	A3SS	0.5	50	50	ENSMUST00000150393.9	ENSMUSG00000023051.12	Tarbp2	chr15	protein_coding	TARBP2, RISC loading complex RNA binding subunit
chr15	102427037	102428910	+	102427037	102427557	3pMXE	0.25	50	50	ENSMUST00000154451.2	ENSMUSG00000023051.12	Tarbp2	chr15	protein_coding	TARBP2, RISC loading complex RNA binding subunit
chr15	102427037	102429556	+	102427037	102427557	3pMXE	0.25	50	50	ENSMUST00000154451.2	ENSMUSG00000023051.12	Tarbp2	chr15	protein_coding	TARBP2, RISC loading complex RNA binding subunit
chr15	102427726	102429573	+	102427726;102429012	102428910;102429573	ES	0.33	50	50	ENSMUST00000154948.8	ENSMUSG00000023051.12	Tarbp2	chr15	protein_coding	TARBP2, RISC loading complex RNA binding subunit
chr15	102427037;102429012	102428910;102429573	+	102427037;102427726	102427557;102429573	MXE	0.5	100	100	ENSMUST00000134033.8	ENSMUSG00000023051.12	Tarbp2	chr15	protein_coding	TARBP2, RISC loading complex RNA binding subunit
chr15	102427037	102428910	+	102427726	102428910	5pMXE	0.5	50	50	ENSMUST00000146756.8	ENSMUSG00000023051.12	Tarbp2	chr15	protein_coding	TARBP2, RISC loading complex RNA binding subunit
chr15	102432706	102446618	-	102432706	102432942	5pMXE	0.5	50	50	ENSMUST00000023814.9	ENSMUSG00000023052.9	Npff	chr15	protein_coding	neuropeptide FF-amide peptide precursor
chr15	102456307	102462219	-	102456307;102459996	102459839;102462219	ES	0.5	50	50	ENSMUST00000184772.2	ENSMUSG00000052414.10	Gm28047	chr15	protein_coding	predicted gene, 28047
chr15	102462356	102471749	-	102462356;102466013	102465895;102471749	ES	0.5	50	50	ENSMUST00000184772.2	ENSMUSG00000052414.10	Gm28047	chr15	protein_coding	predicted gene, 28047
chr15	102466013	102502107	-	102466013;102471845	102471749;102502107	ES	0.5	50	50	ENSMUST00000184772.2	ENSMUSG00000052414.10	Gm28047	chr15	protein_coding	predicted gene, 28047
chr15	102502175	102533797	-	102502175	102533474	5pMXE	0.33	50	50	ENSMUST00000184772.2	ENSMUSG00000052414.10	Gm28047	chr15	protein_coding	predicted gene, 28047
chr15	102434547	102446618	-	102432706	102446618	A3SS	0.33	50	50	ENSMUST00000184772.2	ENSMUSG00000052414.10	Gm28047	chr15	protein_coding	predicted gene, 28047
chr15	102442873	102446618	-	102432706	102446618	A3SS	0.33	50	50	ENSMUST00000184772.2	ENSMUSG00000052414.10	Gm28047	chr15	protein_coding	predicted gene, 28047
chr15	102502175	102533270	-	102502175	102533474	A5SS	0.33	50	50	ENSMUST00000184772.2	ENSMUSG00000052414.10	Gm28047	chr15	protein_coding	predicted gene, 28047
chr15	102442873	102446618	-	102434547	102446618	A3SS	0.33	50	50	ENSMUST00000184906.8	ENSMUSG00000099083.8	Atf7	chr15	protein_coding	activating transcription factor 7
chr15	102502175	102533270	-	102502175	102533797	A5SS	0.33	50	50	ENSMUST00000184616.8	ENSMUSG00000099083.8	Atf7	chr15	protein_coding	activating transcription factor 7
chr15	102462356;102466013	102465895;102502107	-	102462356;102471845	102471749;102502107	MXE	0.5	100	100	ENSMUST00000183452.8	ENSMUSG00000099083.8	Atf7	chr15	protein_coding	activating transcription factor 7
chr15	102456307	102462219	-	102459996	102462219	3pMXE	0.5	50	50	ENSMUST00000184077.8	ENSMUSG00000099083.8	Atf7	chr15	protein_coding	activating transcription factor 7
chr15	102466013	102502107	-	102471845	102502107	3pMXE	0.5	50	50	ENSMUST00000184918.2	ENSMUSG00000099083.8	Atf7	chr15	protein_coding	activating transcription factor 7
chr15	102567191	102567990	+	102566213	102567990	A5SS	0.5	50	50	ENSMUST00000229682.2	ENSMUSG00000116056.2	Gm4544	chr15	lncRNA	predicted gene 4544
chr15	102576214	102580159	-	102576214	102579453	5pMXE	0.5	50	50	ENSMUST00000185641.7	ENSMUSG00000062683.12	Atp5g2	chr15	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9)
chr15	102619603	102622291	-	102619603;102619933	102619778;102622291	ES	0.5	50	50	ENSMUST00000023818.11	ENSMUSG00000023055.11	Calcoco1	chr15	protein_coding	calcium binding and coiled coil domain 1
chr15	102626428	102627977	-	102626428;102627511	102627409;102627977	ES	0.5	50	50	ENSMUST00000023818.11	ENSMUSG00000023055.11	Calcoco1	chr15	protein_coding	calcium binding and coiled coil domain 1
chr15	102615981;102616787	102616716;102616981	-	102615981	102616981	cassetteExon	0.5	100	100	ENSMUST00000023818.11	ENSMUSG00000023055.11	Calcoco1	chr15	protein_coding	calcium binding and coiled coil domain 1
chr15	102626329	102627409	-	102626428	102627409	A3SS	0.33	50	50	ENSMUST00000023818.11	ENSMUSG00000023055.11	Calcoco1	chr15	protein_coding	calcium binding and coiled coil domain 1
chr15	102626407	102627409	-	102626428	102627409	A3SS	0.33	50	50	ENSMUST00000023818.11	ENSMUSG00000023055.11	Calcoco1	chr15	protein_coding	calcium binding and coiled coil domain 1
chr15	102626407	102627409	-	102626329	102627409	A3SS	0.33	50	50	ENSMUST00000229231.2	ENSMUSG00000023055.11	Calcoco1	chr15	protein_coding	calcium binding and coiled coil domain 1
chr15	102626428	102627977	-	102627511	102627977	A3SS&ES	0.5	50	50	ENSMUST00000229231.2	ENSMUSG00000023055.11	Calcoco1	chr15	protein_coding	calcium binding and coiled coil domain 1
chr15	102619603	102622291	-	102619933	102622291	3pMXE	0.5	50	50	ENSMUST00000229398.2	ENSMUSG00000023055.11	Calcoco1	chr15	protein_coding	calcium binding and coiled coil domain 1
chr15	102876043	102923660	+	102876043	102879233	3pMXE	0.5	50	50	ENSMUST00000001699.8	ENSMUSG00000022484.8	Hoxc10	chr15	protein_coding	homeobox C10
chr15	102922967	102923660	+	102876043	102923660	A5SS	0.5	50	50	ENSMUST00000174869.2	ENSMUSG00000022485.4	Hoxc5	chr15	protein_coding	homeobox C5
chr15	102885536	102889524	+	102884929	102889524	A5SS	0.5	50	50	ENSMUST00000173306.2	ENSMUSG00000036139.7	Hoxc9	chr15	protein_coding	homeobox C9
chr15	102943587	102944063	+	102943587;102943741	102943693;102944063	ES	0.5	50	50	ENSMUST00000165375.3	ENSMUSG00000075394.5	Hoxc4	chr15	protein_coding	homeobox C4
chr15	103066345	103071699	-	103066345;103066654	103066584;103071699	ES	0.5	50	50	ENSMUST00000229371.2	ENSMUSG00000036061.11	Smug1	chr15	protein_coding	single-strand selective monofunctional uracil DNA glycosylase
chr15	103066654	103069512	-	103066654	103071699	A5SS	0.5	50	50	ENSMUST00000229371.2	ENSMUSG00000036061.11	Smug1	chr15	protein_coding	single-strand selective monofunctional uracil DNA glycosylase
chr15	103073390	103073500	-	103073390	103075428	A5SS	0.5	50	50	ENSMUST00000229371.2	ENSMUSG00000036061.11	Smug1	chr15	protein_coding	single-strand selective monofunctional uracil DNA glycosylase
chr15	103121681	103123449	-	103121681	103148160	A5SS	0.33	50	50	ENSMUST00000118152.8	ENSMUSG00000009575.15	Cbx5	chr15	protein_coding	chromobox 5
chr15	103121681	103123695	-	103121681	103148160	A5SS	0.33	50	50	ENSMUST00000118152.8	ENSMUSG00000009575.15	Cbx5	chr15	protein_coding	chromobox 5
chr15	103121681;103123548	103123449;103123695	-	103121681	103123695	cassetteExon	0.5	100	100	ENSMUST00000108813.10	ENSMUSG00000009575.15	Cbx5	chr15	protein_coding	chromobox 5
chr15	103121681;103123552	103123449;103123695	-	103121681	103123695	cassetteExon	0.5	100	100	ENSMUST00000108813.10	ENSMUSG00000009575.15	Cbx5	chr15	protein_coding	chromobox 5
chr15	103123552	103123695	-	103123548	103123695	A3SS	0.33	50	50	ENSMUST00000122182.2	ENSMUSG00000009575.15	Cbx5	chr15	protein_coding	chromobox 5
chr15	103151145	103152052	+	103151145;103151507	103151349;103152052	ES	0.5	50	50	ENSMUST00000036004.16	ENSMUSG00000046434.17	Hnrnpa1	chr15	protein_coding	heterogeneous nuclear ribonucleoprotein A1
chr15	103152455	103154773	+	103152455	103152683	3pMXE	0.5	50	50	ENSMUST00000036004.16	ENSMUSG00000046434.17	Hnrnpa1	chr15	protein_coding	heterogeneous nuclear ribonucleoprotein A1
chr15	103151145	103152386	+	103151145;103152207	103152052;103152386	ES	0.5	50	50	ENSMUST00000230171.2	ENSMUSG00000046434.17	Hnrnpa1	chr15	protein_coding	heterogeneous nuclear ribonucleoprotein A1
chr15	103154393	103154773	+	103152455	103154773	A5SS	0.5	50	50	ENSMUST00000230171.2	ENSMUSG00000046434.17	Hnrnpa1	chr15	protein_coding	heterogeneous nuclear ribonucleoprotein A1
chr15	103152455	103154773	+	103152455;103154393	103152683;103154773	ES	0.5	50	50	ENSMUST00000230489.2	ENSMUSG00000046434.17	Hnrnpa1	chr15	protein_coding	heterogeneous nuclear ribonucleoprotein A1
chr15	103151145	103151349	+	103151145	103152386	A3SS	0.33	50	50	ENSMUST00000231141.2	ENSMUSG00000046434.17	Hnrnpa1	chr15	protein_coding	heterogeneous nuclear ribonucleoprotein A1
chr15	103159525	103166739	-	103159525	103163577	5pMXE	0.11	50	50	ENSMUST00000075192.13	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103159625	-	103159525	103163577	A5SS	0.11	50	50	ENSMUST00000075192.13	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103159690	-	103159525	103163577	A5SS	0.11	50	50	ENSMUST00000075192.13	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103159738	-	103159525	103163577	A5SS	0.11	50	50	ENSMUST00000075192.13	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103160058	-	103159525	103163577	A5SS	0.11	50	50	ENSMUST00000075192.13	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103160834	-	103159525	103163577	A5SS	0.11	50	50	ENSMUST00000075192.13	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103161470	-	103159525	103163577	A5SS	0.11	50	50	ENSMUST00000075192.13	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103162394	-	103159525	103163577	A5SS	0.11	50	50	ENSMUST00000075192.13	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103160058	-	103159525	103159690	5pMXE	0.11	50	50	ENSMUST00000133600.8	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103160834	-	103159525	103159690	5pMXE	0.11	50	50	ENSMUST00000133600.8	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103161470	-	103159525	103159690	5pMXE	0.11	50	50	ENSMUST00000133600.8	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103162394	-	103159525	103159690	5pMXE	0.11	50	50	ENSMUST00000133600.8	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103166739	-	103159525	103159690	5pMXE	0.11	50	50	ENSMUST00000133600.8	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103159625	-	103159525	103159690	A5SS	0.11	50	50	ENSMUST00000133600.8	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103159738	-	103159525	103159690	A5SS	0.11	50	50	ENSMUST00000133600.8	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103160058	-	103159525	103159738	5pMXE	0.11	50	50	ENSMUST00000156927.8	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103160834	-	103159525	103159738	5pMXE	0.11	50	50	ENSMUST00000156927.8	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103161470	-	103159525	103159738	5pMXE	0.11	50	50	ENSMUST00000156927.8	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103162394	-	103159525	103159738	5pMXE	0.11	50	50	ENSMUST00000156927.8	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103166739	-	103159525	103159738	5pMXE	0.11	50	50	ENSMUST00000156927.8	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103159625	-	103159525	103159738	A5SS	0.11	50	50	ENSMUST00000156927.8	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103160834	-	103159525	103159625	5pMXE	0.11	50	50	ENSMUST00000149111.8	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103161470	-	103159525	103159625	5pMXE	0.11	50	50	ENSMUST00000149111.8	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103162394	-	103159525	103159625	5pMXE	0.11	50	50	ENSMUST00000149111.8	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103166739	-	103159525	103159625	5pMXE	0.11	50	50	ENSMUST00000149111.8	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103160058	-	103159525	103159625	A5SS	0.11	50	50	ENSMUST00000149111.8	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103162394	-	103159525	103161470	5pMXE	0.11	50	50	ENSMUST00000134193.8	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103166739	-	103159525	103161470	5pMXE	0.11	50	50	ENSMUST00000134193.8	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103160058	-	103159525	103161470	A5SS	0.11	50	50	ENSMUST00000134193.8	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103160834	-	103159525	103161470	A5SS	0.11	50	50	ENSMUST00000134193.8	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103166739	-	103159525	103162394	5pMXE	0.11	50	50	ENSMUST00000131364.8	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103160058	-	103159525	103162394	A5SS	0.11	50	50	ENSMUST00000131364.8	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103160834	-	103159525	103162394	A5SS	0.11	50	50	ENSMUST00000131364.8	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103160834	-	103159525	103160058	5pMXE	0.11	50	50	ENSMUST00000132836.8	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103166739	-	103159525	103160058	5pMXE	0.11	50	50	ENSMUST00000132836.8	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103159525	103166739	-	103159525	103160834	5pMXE	0.11	50	50	ENSMUST00000154510.8	ENSMUSG00000058794.13	Nfe2	chr15	protein_coding	nuclear factor, erythroid derived 2
chr15	103199183	103199756	+	103199335	103199756	A5SS	0.5	50	50	ENSMUST00000229549.2	ENSMUSG00000060992.10	Copz1	chr15	protein_coding	coatomer protein complex, subunit zeta 1
chr15	103241628	103248474	-	103241628	103242658	5pMXE	0.5	50	50	ENSMUST00000229373.2	ENSMUSG00000000552.11	Zfp385a	chr15	protein_coding	zinc finger protein 385A
chr15	103228827	103231818	-	103228827	103241492	A5SS	0.5	50	50	ENSMUST00000229373.2	ENSMUSG00000000552.11	Zfp385a	chr15	protein_coding	zinc finger protein 385A
chr15	103267607	103274727	-	103267607;103268398	103268339;103274727	ES	0.5	50	50	ENSMUST00000215331.2	ENSMUSG00000000555.9	Itga5	chr15	protein_coding	integrin alpha 5 (fibronectin receptor alpha)
chr15	103259080	103259191	-	103259080	103259203	A5SS	0.5	50	50	ENSMUST00000215331.2	ENSMUSG00000000555.9	Itga5	chr15	protein_coding	integrin alpha 5 (fibronectin receptor alpha)
chr15	103336811;103338421	103337940;103338783	-	103336811	103338783	cassetteExon	0.5	100	100	ENSMUST00000023129.15	ENSMUSG00000022487.15	Gtsf1	chr15	protein_coding	gametocyte specific factor 1
chr15	103336811;103338421	103338286;103338783	-	103336811	103338783	cassetteExon	0.5	100	100	ENSMUST00000023129.15	ENSMUSG00000022487.15	Gtsf1	chr15	protein_coding	gametocyte specific factor 1
chr15	103336811;103338684	103338286;103338783	-	103336811	103338783	cassetteExon	0.5	100	100	ENSMUST00000023129.15	ENSMUSG00000022487.15	Gtsf1	chr15	protein_coding	gametocyte specific factor 1
chr15	103336811;103338684	103338604;103338783	-	103336811	103338783	cassetteExon	0.5	100	100	ENSMUST00000023129.15	ENSMUSG00000022487.15	Gtsf1	chr15	protein_coding	gametocyte specific factor 1
chr15	103336811;103338684	103338630;103338783	-	103336811	103338783	cassetteExon	0.5	100	100	ENSMUST00000023129.15	ENSMUSG00000022487.15	Gtsf1	chr15	protein_coding	gametocyte specific factor 1
chr15	103336811	103336938	-	103336811	103338783	A5SS	0.16	50	50	ENSMUST00000023129.15	ENSMUSG00000022487.15	Gtsf1	chr15	protein_coding	gametocyte specific factor 1
chr15	103336811	103337940	-	103336811	103336938	5pMXE	0.16	50	50	ENSMUST00000123724.8	ENSMUSG00000022487.15	Gtsf1	chr15	protein_coding	gametocyte specific factor 1
chr15	103336811	103338286	-	103336811	103336938	5pMXE	0.16	50	50	ENSMUST00000123724.8	ENSMUSG00000022487.15	Gtsf1	chr15	protein_coding	gametocyte specific factor 1
chr15	103336811	103338604	-	103336811	103336938	5pMXE	0.16	50	50	ENSMUST00000123724.8	ENSMUSG00000022487.15	Gtsf1	chr15	protein_coding	gametocyte specific factor 1
chr15	103336811	103338630	-	103336811	103336938	5pMXE	0.16	50	50	ENSMUST00000123724.8	ENSMUSG00000022487.15	Gtsf1	chr15	protein_coding	gametocyte specific factor 1
chr15	103336811	103338286	-	103336811	103337940	5pMXE	0.16	50	50	ENSMUST00000146736.8	ENSMUSG00000022487.15	Gtsf1	chr15	protein_coding	gametocyte specific factor 1
chr15	103336811	103338604	-	103336811	103337940	5pMXE	0.16	50	50	ENSMUST00000146736.8	ENSMUSG00000022487.15	Gtsf1	chr15	protein_coding	gametocyte specific factor 1
chr15	103336811	103338630	-	103336811	103337940	5pMXE	0.16	50	50	ENSMUST00000146736.8	ENSMUSG00000022487.15	Gtsf1	chr15	protein_coding	gametocyte specific factor 1
chr15	103336811	103338783	-	103336811	103337940	5pMXE	0.16	50	50	ENSMUST00000146736.8	ENSMUSG00000022487.15	Gtsf1	chr15	protein_coding	gametocyte specific factor 1
chr15	103336811	103338783	-	103336811	103338604	5pMXE	0.16	50	50	ENSMUST00000153930.8	ENSMUSG00000022487.15	Gtsf1	chr15	protein_coding	gametocyte specific factor 1
chr15	103336811;103338421	103337940;103338604	-	103336811	103338604	cassetteExon	0.5	100	100	ENSMUST00000153930.8	ENSMUSG00000022487.15	Gtsf1	chr15	protein_coding	gametocyte specific factor 1
chr15	103336811;103338421	103338286;103338604	-	103336811	103338604	cassetteExon	0.5	100	100	ENSMUST00000153930.8	ENSMUSG00000022487.15	Gtsf1	chr15	protein_coding	gametocyte specific factor 1
chr15	103336811	103338630	-	103336811	103338604	A5SS	0.16	50	50	ENSMUST00000153930.8	ENSMUSG00000022487.15	Gtsf1	chr15	protein_coding	gametocyte specific factor 1
chr15	103336811	103338783	-	103336811	103338630	5pMXE	0.16	50	50	ENSMUST00000146675.8	ENSMUSG00000022487.15	Gtsf1	chr15	protein_coding	gametocyte specific factor 1
chr15	103336811	103338286	-	103336811	103338630	A5SS	0.16	50	50	ENSMUST00000146675.8	ENSMUSG00000022487.15	Gtsf1	chr15	protein_coding	gametocyte specific factor 1
chr15	103336811;103338421	103337940;103338783	-	103336811;103338684	103338604;103338783	MXE	0.5	100	100	ENSMUST00000141364.8	ENSMUSG00000022487.15	Gtsf1	chr15	protein_coding	gametocyte specific factor 1
chr15	103336811;103338421	103338286;103338783	-	103336811;103338684	103338604;103338783	MXE	0.5	100	100	ENSMUST00000141364.8	ENSMUSG00000022487.15	Gtsf1	chr15	protein_coding	gametocyte specific factor 1
chr15	103336811;103338684	103338630;103338783	-	103336811;103338421	103338286;103338783	MXE	0.5	100	100	ENSMUST00000147389.8	ENSMUSG00000022487.15	Gtsf1	chr15	protein_coding	gametocyte specific factor 1
chr15	103338421;103338684	103338604;103338783	-	103338421	103338783	cassetteExon	0.5	100	100	ENSMUST00000147389.8	ENSMUSG00000022487.15	Gtsf1	chr15	protein_coding	gametocyte specific factor 1
chr15	103338421	103338783	-	103338421	103338604	5pMXE	0.5	50	50	ENSMUST00000129837.2	ENSMUSG00000022487.15	Gtsf1	chr15	protein_coding	gametocyte specific factor 1
chr15	103352803	103353272	-	103352803;103353081	103352961;103353272	ES	0.5	50	50	ENSMUST00000065978.9	ENSMUSG00000053508.9	Gtsf2	chr15	protein_coding	gametocyte specific factor 2
chr15	103372841	103372973	+	103372841	103372933	A3SS	0.5	50	50	ENSMUST00000229468.2	ENSMUSG00000022488.10	Nckap1l	chr15	protein_coding	NCK associated protein 1 like
chr15	103387765	103390387	+	103387282	103390387	A5SS	0.33	50	50	ENSMUST00000229468.2	ENSMUSG00000022488.10	Nckap1l	chr15	protein_coding	NCK associated protein 1 like
chr15	103388294	103390387	+	103387282	103390387	A5SS	0.33	50	50	ENSMUST00000229468.2	ENSMUSG00000022488.10	Nckap1l	chr15	protein_coding	NCK associated protein 1 like
chr15	103388294	103390387	+	103387765	103390387	A5SS	0.33	50	50	ENSMUST00000229835.2	ENSMUSG00000022488.10	Nckap1l	chr15	protein_coding	NCK associated protein 1 like
chr15	103423848	103428376	+	103412010	103428376	A5SS	0.5	50	50	ENSMUST00000226468.2	ENSMUSG00000022489.7	Pde1b	chr15	protein_coding	phosphodiesterase 1B, Ca2+-calmodulin dependent
chr15	103441921	103446222	-	103441921;103442837	103442777;103446222	ES	0.5	50	50	ENSMUST00000023133.8	ENSMUSG00000022490.8	Ppp1r1a	chr15	protein_coding	protein phosphatase 1, regulatory inhibitor subunit 1A
chr15	103471441	103471632	-	103471441	103471670	A5SS	0.5	50	50	ENSMUST00000226679.2	ENSMUSG00000022491.6	Glycam1	chr15	protein_coding	glycosylation dependent cell adhesion molecule 1
chr15	103471879	103472624	-	103471885	103472624	A3SS	0.5	50	50	ENSMUST00000228895.2	ENSMUSG00000022491.6	Glycam1	chr15	protein_coding	glycosylation dependent cell adhesion molecule 1
chr16	3525896	3526409	-	3525896;3526091	3526060;3526409	ES	0.33	50	50	ENSMUST00000023180.15	ENSMUSG00000022534.15	Mefv	chr16	protein_coding	Mediterranean fever
chr16	3525961	3526409	-	3526091	3526409	A3SS&ES	0.33	50	50	ENSMUST00000023180.15	ENSMUSG00000022534.15	Mefv	chr16	protein_coding	Mediterranean fever
chr16	3531693	3533057	-	3531693	3533147	A5SS	0.5	50	50	ENSMUST00000023180.15	ENSMUSG00000022534.15	Mefv	chr16	protein_coding	Mediterranean fever
chr16	3525961	3526409	-	3525896	3526409	A3SS	0.33	50	50	ENSMUST00000229725.2	ENSMUSG00000022534.15	Mefv	chr16	protein_coding	Mediterranean fever
chr16	3563821	3564635	+	3563821;3564359	3564286;3564635	ES	0.5	50	50	ENSMUST00000023176.5	ENSMUSG00000022529.12	Zfp263	chr16	protein_coding	zinc finger protein 263
chr16	3563376	3563641	+	3562631	3563641	A5SS	0.5	50	50	ENSMUST00000023176.5	ENSMUSG00000022529.12	Zfp263	chr16	protein_coding	zinc finger protein 263
chr16	3562631	3566013	+	3564758	3566013	A5SS&ES	0.5	50	50	ENSMUST00000159425.8	ENSMUSG00000022529.12	Zfp263	chr16	protein_coding	zinc finger protein 263
chr16	3562631	3566576	+	3566129	3566576	A5SS&ES	0.5	50	50	ENSMUST00000159425.8	ENSMUSG00000022529.12	Zfp263	chr16	protein_coding	zinc finger protein 263
chr16	3562631	3566576	+	3562631;3566129	3566013;3566576	ES	0.5	50	50	ENSMUST00000160923.2	ENSMUSG00000022529.12	Zfp263	chr16	protein_coding	zinc finger protein 263
chr16	3562631	3563641	+	3562631	3566013	A3SS	0.33	50	50	ENSMUST00000160923.2	ENSMUSG00000022529.12	Zfp263	chr16	protein_coding	zinc finger protein 263
chr16	3562631	3563641	+	3562631	3566576	A3SS	0.33	50	50	ENSMUST00000159060.2	ENSMUSG00000022529.12	Zfp263	chr16	protein_coding	zinc finger protein 263
chr16	3648930	3656541	+	3648930	3656666	A3SS	0.5	50	50	ENSMUST00000214238.2	ENSMUSG00000059043.3	Olfr15	chr16	protein_coding	olfactory receptor 15
chr16	3689140	3702152	-	3689140	3689923	5pMXE	0.5	50	50	ENSMUST00000090522.5	ENSMUSG00000039789.8	Zfp597	chr16	protein_coding	zinc finger protein 597
chr16	3689140	3702152	-	3681553	3702152	A3SS	0.5	50	50	ENSMUST00000138857.2	ENSMUSG00000039789.8	Zfp597	chr16	protein_coding	zinc finger protein 597
chr16	3717832	3719640	+	3717832	3718507	3pMXE	0.25	50	50	ENSMUST00000151988.8	ENSMUSG00000005982.15	Naa60	chr16	protein_coding	N(alpha)-acetyltransferase 60, NatF catalytic subunit
chr16	3717832	3729315	+	3717832	3718507	3pMXE	0.25	50	50	ENSMUST00000151988.8	ENSMUSG00000005982.15	Naa60	chr16	protein_coding	N(alpha)-acetyltransferase 60, NatF catalytic subunit
chr16	3712348;3713664	3713378;3715115	+	3712348	3715115	cassetteExon	0.5	100	100	ENSMUST00000151988.8	ENSMUSG00000005982.15	Naa60	chr16	protein_coding	N(alpha)-acetyltransferase 60, NatF catalytic subunit
chr16	3712348;3713831	3713378;3715115	+	3712348	3715115	cassetteExon	0.5	100	100	ENSMUST00000151988.8	ENSMUSG00000005982.15	Naa60	chr16	protein_coding	N(alpha)-acetyltransferase 60, NatF catalytic subunit
chr16	3717832	3718557	+	3717832	3718507	A3SS	0.25	50	50	ENSMUST00000151988.8	ENSMUSG00000005982.15	Naa60	chr16	protein_coding	N(alpha)-acetyltransferase 60, NatF catalytic subunit
chr16	3702670	3712233	+	3690445	3712233	A5SS	0.33	50	50	ENSMUST00000151988.8	ENSMUSG00000005982.15	Naa60	chr16	protein_coding	N(alpha)-acetyltransferase 60, NatF catalytic subunit
chr16	3702670	3715115	+	3712348	3715115	A5SS&ES	0.25	50	50	ENSMUST00000151988.8	ENSMUSG00000005982.15	Naa60	chr16	protein_coding	N(alpha)-acetyltransferase 60, NatF catalytic subunit
chr16	3702710	3712233	+	3690445	3712233	A5SS	0.33	50	50	ENSMUST00000151988.8	ENSMUSG00000005982.15	Naa60	chr16	protein_coding	N(alpha)-acetyltransferase 60, NatF catalytic subunit
chr16	3716172	3717736	+	3715244	3717736	A5SS	0.5	50	50	ENSMUST00000151988.8	ENSMUSG00000005982.15	Naa60	chr16	protein_coding	N(alpha)-acetyltransferase 60, NatF catalytic subunit
chr16	3702670;3712348	3712233;3715115	+	3702670	3715115	cassetteExon	0.5	100	100	ENSMUST00000176625.8	ENSMUSG00000005982.15	Naa60	chr16	protein_coding	N(alpha)-acetyltransferase 60, NatF catalytic subunit
chr16	3715244	3719640	+	3715244	3717736	A3SS&ES	0.5	50	50	ENSMUST00000176625.8	ENSMUSG00000005982.15	Naa60	chr16	protein_coding	N(alpha)-acetyltransferase 60, NatF catalytic subunit
chr16	3713664	3715115	+	3702670	3715115	A5SS	0.25	50	50	ENSMUST00000176625.8	ENSMUSG00000005982.15	Naa60	chr16	protein_coding	N(alpha)-acetyltransferase 60, NatF catalytic subunit
chr16	3713831	3715115	+	3702670	3715115	A5SS	0.25	50	50	ENSMUST00000176625.8	ENSMUSG00000005982.15	Naa60	chr16	protein_coding	N(alpha)-acetyltransferase 60, NatF catalytic subunit
chr16	3702710	3712233	+	3702670	3712233	A5SS	0.33	50	50	ENSMUST00000135093.8	ENSMUSG00000005982.15	Naa60	chr16	protein_coding	N(alpha)-acetyltransferase 60, NatF catalytic subunit
chr16	3713664	3715115	+	3713831	3715115	A5SS	0.25	50	50	ENSMUST00000135093.8	ENSMUSG00000005982.15	Naa60	chr16	protein_coding	N(alpha)-acetyltransferase 60, NatF catalytic subunit
chr16	3717832	3719640	+	3717832	3718557	A3SS&ES	0.33	50	50	ENSMUST00000143537.9	ENSMUSG00000005982.15	Naa60	chr16	protein_coding	N(alpha)-acetyltransferase 60, NatF catalytic subunit
chr16	3715244;3717832	3717736;3719640	+	3715244	3719640	cassetteExon	0.5	100	100	ENSMUST00000175809.8	ENSMUSG00000005982.15	Naa60	chr16	protein_coding	N(alpha)-acetyltransferase 60, NatF catalytic subunit
chr16	3717832	3729315	+	3717832	3719640	3pMXE	0.25	50	50	ENSMUST00000176224.8	ENSMUSG00000005982.15	Naa60	chr16	protein_coding	N(alpha)-acetyltransferase 60, NatF catalytic subunit
chr16	3717832	3718557	+	3717832	3729315	A3SS	0.25	50	50	ENSMUST00000176233.2	ENSMUSG00000093575.2	Gm20695	chr16	protein_coding	predicted gene 20695
chr16	3726728	3729315	+	3717832	3729315	A5SS	0.2	50	50	ENSMUST00000176233.2	ENSMUSG00000093575.2	Gm20695	chr16	protein_coding	predicted gene 20695
chr16	3727017	3729315	+	3717832	3729315	A5SS	0.2	50	50	ENSMUST00000176233.2	ENSMUSG00000093575.2	Gm20695	chr16	protein_coding	predicted gene 20695
chr16	3727165	3729315	+	3717832	3729315	A5SS	0.2	50	50	ENSMUST00000176233.2	ENSMUSG00000093575.2	Gm20695	chr16	protein_coding	predicted gene 20695
chr16	3729138	3729315	+	3717832	3729315	A5SS	0.2	50	50	ENSMUST00000176233.2	ENSMUSG00000093575.2	Gm20695	chr16	protein_coding	predicted gene 20695
chr16	3725058;3726001	3725509;3726469	-	3725058	3726469	cassetteExon	0.5	100	100	ENSMUST00000177519.2	ENSMUSG00000005983.16	1700037C18Rik	chr16	protein_coding	RIKEN cDNA 1700037C18 gene
chr16	3725058;3726001	3725863;3726469	-	3725058	3726469	cassetteExon	0.5	100	100	ENSMUST00000177519.2	ENSMUSG00000005983.16	1700037C18Rik	chr16	protein_coding	RIKEN cDNA 1700037C18 gene
chr16	3725058	3725479	-	3725058	3726469	A5SS	0.2	50	50	ENSMUST00000177519.2	ENSMUSG00000005983.16	1700037C18Rik	chr16	protein_coding	RIKEN cDNA 1700037C18 gene
chr16	3725058	3726314	-	3725058	3726469	A5SS	0.2	50	50	ENSMUST00000177519.2	ENSMUSG00000005983.16	1700037C18Rik	chr16	protein_coding	RIKEN cDNA 1700037C18 gene
chr16	3725058	3725863	-	3725058	3725479	5pMXE	0.2	50	50	ENSMUST00000006139.8	ENSMUSG00000005983.16	1700037C18Rik	chr16	protein_coding	RIKEN cDNA 1700037C18 gene
chr16	3725058	3726314	-	3725058	3725479	5pMXE	0.2	50	50	ENSMUST00000006139.8	ENSMUSG00000005983.16	1700037C18Rik	chr16	protein_coding	RIKEN cDNA 1700037C18 gene
chr16	3724164	3724705	-	3715209	3724705	A3SS	0.5	50	50	ENSMUST00000006139.8	ENSMUSG00000005983.16	1700037C18Rik	chr16	protein_coding	RIKEN cDNA 1700037C18 gene
chr16	3725058	3725509	-	3725058	3725479	A5SS	0.2	50	50	ENSMUST00000006139.8	ENSMUSG00000005983.16	1700037C18Rik	chr16	protein_coding	RIKEN cDNA 1700037C18 gene
chr16	3725058	3725509	-	3725058	3726314	A5SS	0.2	50	50	ENSMUST00000115859.8	ENSMUSG00000005983.16	1700037C18Rik	chr16	protein_coding	RIKEN cDNA 1700037C18 gene
chr16	3725058	3725863	-	3725058	3726314	A5SS	0.2	50	50	ENSMUST00000115859.8	ENSMUSG00000005983.16	1700037C18Rik	chr16	protein_coding	RIKEN cDNA 1700037C18 gene
chr16	3725058	3725863	-	3725058	3725509	5pMXE	0.2	50	50	ENSMUST00000177323.8	ENSMUSG00000005983.16	1700037C18Rik	chr16	protein_coding	RIKEN cDNA 1700037C18 gene
chr16	3725058	3726469	-	3725058	3725509	5pMXE	0.2	50	50	ENSMUST00000177323.8	ENSMUSG00000005983.16	1700037C18Rik	chr16	protein_coding	RIKEN cDNA 1700037C18 gene
chr16	3727017	3729315	+	3726728	3729315	A5SS	0.2	50	50	ENSMUST00000145150.9	ENSMUSG00000014232.15	Cluap1	chr16	protein_coding	clusterin associated protein 1
chr16	3727165	3729315	+	3726728	3729315	A5SS	0.2	50	50	ENSMUST00000145150.9	ENSMUSG00000014232.15	Cluap1	chr16	protein_coding	clusterin associated protein 1
chr16	3729138	3729315	+	3726728	3729315	A5SS	0.2	50	50	ENSMUST00000145150.9	ENSMUSG00000014232.15	Cluap1	chr16	protein_coding	clusterin associated protein 1
chr16	3727017;3729138	3729014;3729315	+	3727017	3729315	cassetteExon	0.5	100	100	ENSMUST00000040881.14	ENSMUSG00000014232.15	Cluap1	chr16	protein_coding	clusterin associated protein 1
chr16	3727165	3729315	+	3727017	3729315	A5SS	0.2	50	50	ENSMUST00000040881.14	ENSMUSG00000014232.15	Cluap1	chr16	protein_coding	clusterin associated protein 1
chr16	3729138	3729315	+	3727165	3729315	A5SS	0.2	50	50	ENSMUST00000139294.2	ENSMUSG00000014232.15	Cluap1	chr16	protein_coding	clusterin associated protein 1
chr16	3766207	3767234	-	3766207;3766851	3766768;3767234	ES	0.5	50	50	ENSMUST00000180200.8	ENSMUSG00000049871.15	Nlrc3	chr16	protein_coding	NLR family, CARD domain containing 3
chr16	3771391	3771796	-	3771375	3771796	A3SS	0.33	50	50	ENSMUST00000180200.8	ENSMUSG00000049871.15	Nlrc3	chr16	protein_coding	NLR family, CARD domain containing 3
chr16	3783503	3794193	-	3777338	3794193	A3SS	0.5	50	50	ENSMUST00000180200.8	ENSMUSG00000049871.15	Nlrc3	chr16	protein_coding	NLR family, CARD domain containing 3
chr16	3777338	3780318	-	3777338	3794193	A5SS	0.5	50	50	ENSMUST00000180200.8	ENSMUSG00000049871.15	Nlrc3	chr16	protein_coding	NLR family, CARD domain containing 3
chr16	3771375	3771796	-	3767317	3771796	A3SS	0.33	50	50	ENSMUST00000229884.2	ENSMUSG00000049871.15	Nlrc3	chr16	protein_coding	NLR family, CARD domain containing 3
chr16	3771391	3771796	-	3767317	3771796	A3SS	0.33	50	50	ENSMUST00000229884.2	ENSMUSG00000049871.15	Nlrc3	chr16	protein_coding	NLR family, CARD domain containing 3
chr16	3767317	3770251	-	3767317	3771796	A5SS	0.5	50	50	ENSMUST00000229884.2	ENSMUSG00000049871.15	Nlrc3	chr16	protein_coding	NLR family, CARD domain containing 3
chr16	3766207	3767234	-	3766851	3767234	3pMXE	0.5	50	50	ENSMUST00000096308.12	ENSMUSG00000049871.15	Nlrc3	chr16	protein_coding	NLR family, CARD domain containing 3
chr16	3799551	3802855	-	3799551;3801106	3800843;3802855	ES	0.5	50	50	ENSMUST00000146569.8	ENSMUSG00000039738.17	Slx4	chr16	protein_coding	SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)
chr16	3805040	3805779	-	3805045	3805779	A3SS	0.5	50	50	ENSMUST00000146569.8	ENSMUSG00000039738.17	Slx4	chr16	protein_coding	SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)
chr16	3809985;3810889	3810772;3812572	-	3809985	3812572	cassetteExon	0.5	100	100	ENSMUST00000040790.14	ENSMUSG00000039738.17	Slx4	chr16	protein_coding	SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)
chr16	3817209	3818817	-	3817209	3819225	A5SS	0.5	50	50	ENSMUST00000040790.14	ENSMUSG00000039738.17	Slx4	chr16	protein_coding	SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)
chr16	3819542	3821422	-	3819542	3821596	A5SS	0.5	50	50	ENSMUST00000171762.2	ENSMUSG00000039738.17	Slx4	chr16	protein_coding	SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)
chr16	3855038	3855172	+	3855038	3855221	A3SS	0.5	50	50	ENSMUST00000137748.8	ENSMUSG00000005980.16	Dnase1	chr16	protein_coding	deoxyribonuclease I
chr16	3855140	3855221	+	3855038	3855221	A5SS	0.5	50	50	ENSMUST00000137748.8	ENSMUSG00000005980.16	Dnase1	chr16	protein_coding	deoxyribonuclease I
chr16	3857148	3857676	+	3857148;3857505	3857409;3857676	ES	0.5	50	50	ENSMUST00000006136.11	ENSMUSG00000005980.16	Dnase1	chr16	protein_coding	deoxyribonuclease I
chr16	3858354	3861817	-	3858295	3861817	A3SS	0.5	50	50	ENSMUST00000006137.9	ENSMUSG00000005981.12	Trap1	chr16	protein_coding	TNF receptor-associated protein 1
chr16	3886202	3886527	-	3886202	3886721	A5SS	0.5	50	50	ENSMUST00000006137.9	ENSMUSG00000005981.12	Trap1	chr16	protein_coding	TNF receptor-associated protein 1
chr16	3910219	3912038	-	3910219;3911449	3911336;3912038	ES	0.5	50	50	ENSMUST00000023165.9	ENSMUSG00000022521.11	Crebbp	chr16	protein_coding	CREB binding protein
chr16	3937720	3942500	-	3937720;3942078	3942034;3942500	ES	0.5	50	50	ENSMUST00000023165.9	ENSMUSG00000022521.11	Crebbp	chr16	protein_coding	CREB binding protein
chr16	3946550	3956609	-	3946550;3955343	3955230;3956609	ES	0.5	50	50	ENSMUST00000023165.9	ENSMUSG00000022521.11	Crebbp	chr16	protein_coding	CREB binding protein
chr16	3919532	3925292	-	3919502	3925292	A3SS	0.5	50	50	ENSMUST00000023165.9	ENSMUSG00000022521.11	Crebbp	chr16	protein_coding	CREB binding protein
chr16	3910219	3912500	-	3910219;3912184	3912038;3912500	ES	0.5	50	50	ENSMUST00000206464.2	ENSMUSG00000022521.11	Crebbp	chr16	protein_coding	CREB binding protein
chr16	3910219	3911336	-	3910219	3912500	A5SS	0.33	50	50	ENSMUST00000206098.2	ENSMUSG00000022521.11	Crebbp	chr16	protein_coding	CREB binding protein
chr16	4311744	4340857	-	4311741	4340857	A3SS	0.33	50	50	ENSMUST00000090500.10	ENSMUSG00000022519.15	Srl	chr16	protein_coding	sarcalumenin
chr16	4315579	4340857	-	4311741	4340857	A3SS	0.33	50	50	ENSMUST00000090500.10	ENSMUSG00000022519.15	Srl	chr16	protein_coding	sarcalumenin
chr16	4311744	4340857	-	4311744;4315579	4314269;4340857	ES	0.33	50	50	ENSMUST00000023161.8	ENSMUSG00000022519.15	Srl	chr16	protein_coding	sarcalumenin
chr16	4315579	4359544	-	4315579	4340857	5pMXE	0.5	50	50	ENSMUST00000023161.8	ENSMUSG00000022519.15	Srl	chr16	protein_coding	sarcalumenin
chr16	4315579	4359544	-	4311744	4359544	A3SS	0.5	50	50	ENSMUST00000133440.2	ENSMUSG00000022519.15	Srl	chr16	protein_coding	sarcalumenin
chr16	4311744	4314269	-	4311744	4359544	A5SS	0.33	50	50	ENSMUST00000133440.2	ENSMUSG00000022519.15	Srl	chr16	protein_coding	sarcalumenin
chr16	4311744	4340857	-	4311744	4359544	A5SS	0.33	50	50	ENSMUST00000133440.2	ENSMUSG00000022519.15	Srl	chr16	protein_coding	sarcalumenin
chr16	4315579	4340857	-	4311744	4340857	A3SS	0.33	50	50	ENSMUST00000132284.2	ENSMUSG00000022519.15	Srl	chr16	protein_coding	sarcalumenin
chr16	4311744	4314269	-	4311744	4340857	A5SS	0.33	50	50	ENSMUST00000132284.2	ENSMUSG00000022519.15	Srl	chr16	protein_coding	sarcalumenin
chr16	4369964	4370652	-	4369964	4377292	A5SS	0.33	50	50	ENSMUST00000005862.9	ENSMUSG00000005718.9	Tfap4	chr16	protein_coding	transcription factor AP4
chr16	4369964	4376529	-	4369964	4377292	A5SS	0.33	50	50	ENSMUST00000005862.9	ENSMUSG00000005718.9	Tfap4	chr16	protein_coding	transcription factor AP4
chr16	4369964	4370652	-	4369964	4376529	A5SS	0.33	50	50	ENSMUST00000230875.2	ENSMUSG00000005718.9	Tfap4	chr16	protein_coding	transcription factor AP4
chr16	4429733	4439473	+	4429733	4431250	3pMXE	0.5	50	50	ENSMUST00000014447.13	ENSMUSG00000014303.14	Glis2	chr16	protein_coding	GLIS family zinc finger 2
chr16	4419067	4426462	+	4412799	4426462	A5SS	0.5	50	50	ENSMUST00000014447.13	ENSMUSG00000014303.14	Glis2	chr16	protein_coding	GLIS family zinc finger 2
chr16	4435126	4435783	-	4435013	4435783	A3SS	0.5	50	50	ENSMUST00000156889.8	ENSMUSG00000014301.14	Pam16	chr16	protein_coding	presequence translocase-asssociated motor 16 homolog (S. cerevisiae)
chr16	4450385	4451578	-	4450385;4451294	4451119;4451578	ES	0.33	50	50	ENSMUST00000038552.13	ENSMUSG00000039637.16	Coro7	chr16	protein_coding	coronin 7
chr16	4451260	4451578	-	4451294	4451578	A3SS	0.33	50	50	ENSMUST00000038552.13	ENSMUSG00000039637.16	Coro7	chr16	protein_coding	coronin 7
chr16	4456675	4472874	-	4453302	4472874	A3SS	0.33	50	50	ENSMUST00000038552.13	ENSMUSG00000039637.16	Coro7	chr16	protein_coding	coronin 7
chr16	4470625	4472874	-	4453302	4472874	A3SS	0.33	50	50	ENSMUST00000038552.13	ENSMUSG00000039637.16	Coro7	chr16	protein_coding	coronin 7
chr16	4452906	4464525	-	4452906	4453248	A5SS&ES	0.5	50	50	ENSMUST00000038552.13	ENSMUSG00000039637.16	Coro7	chr16	protein_coding	coronin 7
chr16	4470625	4472874	-	4456675	4472874	A3SS	0.33	50	50	ENSMUST00000135823.8	ENSMUSG00000039637.16	Coro7	chr16	protein_coding	coronin 7
chr16	4450385;4451260	4451119;4451578	-	4450385	4451578	cassetteExon	0.5	100	100	ENSMUST00000151156.8	ENSMUSG00000039637.16	Coro7	chr16	protein_coding	coronin 7
chr16	4450385	4451578	-	4451294	4451578	3pMXE	0.33	50	50	ENSMUST00000143723.8	ENSMUSG00000039637.16	Coro7	chr16	protein_coding	coronin 7
chr16	4458012	4493490	+	4458012	4466046	3pMXE	0.33	50	50	ENSMUST00000038770.4	ENSMUSG00000039646.6	Vasn	chr16	protein_coding	vasorin
chr16	4458012	4465246	+	4458012	4466046	A3SS	0.33	50	50	ENSMUST00000038770.4	ENSMUSG00000039646.6	Vasn	chr16	protein_coding	vasorin
chr16	4458012	4493490	+	4458012	4465246	3pMXE	0.33	50	50	ENSMUST00000138044.2	ENSMUSG00000039646.6	Vasn	chr16	protein_coding	vasorin
chr16	4502208	4505101	+	4501609	4505101	A5SS	0.5	50	50	ENSMUST00000144815.2	ENSMUSG00000004069.18	Dnaja3	chr16	protein_coding	DnaJ heat shock protein family (Hsp40) member A3
chr16	4511276	4514253	+	4511276;4512380	4512228;4514253	ES	0.5	50	50	ENSMUST00000060067.12	ENSMUSG00000004069.18	Dnaja3	chr16	protein_coding	DnaJ heat shock protein family (Hsp40) member A3
chr16	4520172	4524432	+	4520172;4523824	4523708;4524432	ES	0.5	50	50	ENSMUST00000060067.12	ENSMUSG00000004069.18	Dnaja3	chr16	protein_coding	DnaJ heat shock protein family (Hsp40) member A3
chr16	4532530;4533494	4533097;4534161	-	4532530	4534161	cassetteExon	0.5	100	100	ENSMUST00000120056.8	ENSMUSG00000063445.15	Nmral1	chr16	protein_coding	NmrA-like family domain containing 1
chr16	4532530;4533494	4533465;4534161	-	4532530	4534161	cassetteExon	0.5	100	100	ENSMUST00000120056.8	ENSMUSG00000063445.15	Nmral1	chr16	protein_coding	NmrA-like family domain containing 1
chr16	4529544	4531504	-	4529467	4531504	A3SS	0.33	50	50	ENSMUST00000120056.8	ENSMUSG00000063445.15	Nmral1	chr16	protein_coding	NmrA-like family domain containing 1
chr16	4530415	4531504	-	4529467	4531504	A3SS	0.33	50	50	ENSMUST00000120056.8	ENSMUSG00000063445.15	Nmral1	chr16	protein_coding	NmrA-like family domain containing 1
chr16	4530415	4531504	-	4529544	4531504	A3SS	0.33	50	50	ENSMUST00000115851.10	ENSMUSG00000063445.15	Nmral1	chr16	protein_coding	NmrA-like family domain containing 1
chr16	4532530	4533097	-	4532530	4533465	A5SS	0.33	50	50	ENSMUST00000079130.14	ENSMUSG00000063445.15	Nmral1	chr16	protein_coding	NmrA-like family domain containing 1
chr16	4544335	4580423	+	4544335	4582470	A3SS	0.5	50	50	ENSMUST00000154117.2	ENSMUSG00000004070.16	Hmox2	chr16	protein_coding	heme oxygenase 2
chr16	4581710	4582470	+	4544335	4582470	A5SS	0.5	50	50	ENSMUST00000154117.2	ENSMUSG00000004070.16	Hmox2	chr16	protein_coding	heme oxygenase 2
chr16	4559603	4580423	+	4544335	4580423	A5SS	0.2	50	50	ENSMUST00000004172.15	ENSMUSG00000004070.16	Hmox2	chr16	protein_coding	heme oxygenase 2
chr16	4574976	4580423	+	4544335	4580423	A5SS	0.2	50	50	ENSMUST00000004172.15	ENSMUSG00000004070.16	Hmox2	chr16	protein_coding	heme oxygenase 2
chr16	4574991	4580423	+	4544335	4580423	A5SS	0.2	50	50	ENSMUST00000004172.15	ENSMUSG00000004070.16	Hmox2	chr16	protein_coding	heme oxygenase 2
chr16	4575034	4580423	+	4544335	4580423	A5SS	0.2	50	50	ENSMUST00000004172.15	ENSMUSG00000004070.16	Hmox2	chr16	protein_coding	heme oxygenase 2
chr16	4574976	4580423	+	4559603	4580423	A5SS	0.2	50	50	ENSMUST00000120232.8	ENSMUSG00000004070.16	Hmox2	chr16	protein_coding	heme oxygenase 2
chr16	4574991	4580423	+	4559603	4580423	A5SS	0.2	50	50	ENSMUST00000120232.8	ENSMUSG00000004070.16	Hmox2	chr16	protein_coding	heme oxygenase 2
chr16	4575034	4580423	+	4559603	4580423	A5SS	0.2	50	50	ENSMUST00000120232.8	ENSMUSG00000004070.16	Hmox2	chr16	protein_coding	heme oxygenase 2
chr16	4574991	4580423	+	4574976	4580423	A5SS	0.2	50	50	ENSMUST00000140367.8	ENSMUSG00000004070.16	Hmox2	chr16	protein_coding	heme oxygenase 2
chr16	4575034	4580423	+	4574976	4580423	A5SS	0.2	50	50	ENSMUST00000140367.8	ENSMUSG00000004070.16	Hmox2	chr16	protein_coding	heme oxygenase 2
chr16	4574991	4580423	+	4575034	4580423	A5SS	0.2	50	50	ENSMUST00000118885.8	ENSMUSG00000004070.16	Hmox2	chr16	protein_coding	heme oxygenase 2
chr16	4586513	4586609	-	4568465	4586609	A3SS	0.5	50	50	ENSMUST00000147225.8	ENSMUSG00000004071.14	Cdip1	chr16	protein_coding	cell death inducing Trp53 target 1
chr16	4586831	4587504	-	4586882	4587504	A3SS	0.5	50	50	ENSMUST00000147225.8	ENSMUSG00000004071.14	Cdip1	chr16	protein_coding	cell death inducing Trp53 target 1
chr16	4588599	4608016	-	4588599	4607695	5pMXE	0.5	50	50	ENSMUST00000004173.12	ENSMUSG00000004071.14	Cdip1	chr16	protein_coding	cell death inducing Trp53 target 1
chr16	4659363	4665290	+	4653872	4665290	A5SS	0.5	50	50	ENSMUST00000177042.8	ENSMUSG00000022518.17	4930562C15Rik	chr16	protein_coding	RIKEN cDNA 4930562C15 gene
chr16	4682531	4685159	+	4682531;4684148	4684068;4685159	ES	0.5	50	50	ENSMUST00000100211.11	ENSMUSG00000022518.17	4930562C15Rik	chr16	protein_coding	RIKEN cDNA 4930562C15 gene
chr16	4682531	4683994	+	4682531	4684068	A3SS	0.33	50	50	ENSMUST00000100211.11	ENSMUSG00000022518.17	4930562C15Rik	chr16	protein_coding	RIKEN cDNA 4930562C15 gene
chr16	4676456	4678828	+	4672857	4678828	A5SS	0.33	50	50	ENSMUST00000100211.11	ENSMUSG00000022518.17	4930562C15Rik	chr16	protein_coding	RIKEN cDNA 4930562C15 gene
chr16	4676467	4678828	+	4672857	4678828	A5SS	0.33	50	50	ENSMUST00000100211.11	ENSMUSG00000022518.17	4930562C15Rik	chr16	protein_coding	RIKEN cDNA 4930562C15 gene
chr16	4676467	4678828	+	4676456	4678828	A5SS	0.33	50	50	ENSMUST00000176982.8	ENSMUSG00000022518.17	4930562C15Rik	chr16	protein_coding	RIKEN cDNA 4930562C15 gene
chr16	4682531;4684148	4683994;4685159	+	4682531	4685159	cassetteExon	0.5	100	100	ENSMUST00000176394.2	ENSMUSG00000022518.17	4930562C15Rik	chr16	protein_coding	RIKEN cDNA 4930562C15 gene
chr16	4733683	4736730	+	4733683;4734018	4733969;4736730	ES	0.5	50	50	ENSMUST00000023159.10	ENSMUSG00000022517.18	Mgrn1	chr16	protein_coding	mahogunin, ring finger 1
chr16	4742396;4744238	4744173;4745539	+	4742396	4745539	cassetteExon	0.5	100	100	ENSMUST00000023159.10	ENSMUSG00000022517.18	Mgrn1	chr16	protein_coding	mahogunin, ring finger 1
chr16	4745765;4748167	4747951;4748977	+	4745765;4748678	4748555;4748977	MXE	0.5	100	100	ENSMUST00000023159.10	ENSMUSG00000022517.18	Mgrn1	chr16	protein_coding	mahogunin, ring finger 1
chr16	4750162;4752103	4752059;4754760	+	4750162	4754760	cassetteExon	0.5	100	100	ENSMUST00000023159.10	ENSMUSG00000022517.18	Mgrn1	chr16	protein_coding	mahogunin, ring finger 1
chr16	4704337	4725229	+	4704337	4725232	A3SS	0.5	50	50	ENSMUST00000023159.10	ENSMUSG00000022517.18	Mgrn1	chr16	protein_coding	mahogunin, ring finger 1
chr16	4731212	4731554	+	4729332	4731554	A5SS	0.5	50	50	ENSMUST00000023159.10	ENSMUSG00000022517.18	Mgrn1	chr16	protein_coding	mahogunin, ring finger 1
chr16	4750162	4754760	+	4750162	4752059	3pMXE	0.5	50	50	ENSMUST00000230990.2	ENSMUSG00000022517.18	Mgrn1	chr16	protein_coding	mahogunin, ring finger 1
chr16	4757577	4758060	+	4757502	4758060	A5SS	0.5	50	50	ENSMUST00000230931.2	ENSMUSG00000022516.11	Nudt16l1	chr16	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1
chr16	4759661	4760075	-	4759661;4759851	4759763;4760075	ES	0.5	50	50	ENSMUST00000231036.2	ENSMUSG00000022515.7	Anks3	chr16	protein_coding	ankyrin repeat and sterile alpha motif domain containing 3
chr16	4760158	4760557	-	4760129	4760557	A3SS	0.5	50	50	ENSMUST00000231036.2	ENSMUSG00000022515.7	Anks3	chr16	protein_coding	ankyrin repeat and sterile alpha motif domain containing 3
chr16	4764187	4765129	-	4764043	4765129	A3SS	0.5	50	50	ENSMUST00000231036.2	ENSMUSG00000022515.7	Anks3	chr16	protein_coding	ankyrin repeat and sterile alpha motif domain containing 3
chr16	4766227	4771683	-	4766227;4768632	4768477;4771683	ES	0.5	50	50	ENSMUST00000023157.6	ENSMUSG00000022515.7	Anks3	chr16	protein_coding	ankyrin repeat and sterile alpha motif domain containing 3
chr16	4776030	4781984	-	4776030;4778432	4778261;4781984	ES	0.33	50	50	ENSMUST00000023157.6	ENSMUSG00000022515.7	Anks3	chr16	protein_coding	ankyrin repeat and sterile alpha motif domain containing 3
chr16	4773803;4774483	4774414;4775505	-	4773803	4775505	cassetteExon	0.5	100	100	ENSMUST00000023157.6	ENSMUSG00000022515.7	Anks3	chr16	protein_coding	ankyrin repeat and sterile alpha motif domain containing 3
chr16	4772740	4773722	-	4771818	4773722	A3SS	0.5	50	50	ENSMUST00000023157.6	ENSMUSG00000022515.7	Anks3	chr16	protein_coding	ankyrin repeat and sterile alpha motif domain containing 3
chr16	4766227	4771683	-	4768632	4771683	3pMXE	0.5	50	50	ENSMUST00000230493.2	ENSMUSG00000022515.7	Anks3	chr16	protein_coding	ankyrin repeat and sterile alpha motif domain containing 3
chr16	4775626	4781984	-	4775626;4776030	4775832;4781984	ES	0.33	50	50	ENSMUST00000230721.2	ENSMUSG00000022515.7	Anks3	chr16	protein_coding	ankyrin repeat and sterile alpha motif domain containing 3
chr16	4778432	4781984	-	4775626	4781984	A3SS	0.33	50	50	ENSMUST00000230771.2	ENSMUSG00000022515.7	Anks3	chr16	protein_coding	ankyrin repeat and sterile alpha motif domain containing 3
chr16	4776030	4781984	-	4778432	4781984	3pMXE	0.33	50	50	ENSMUST00000229077.2	ENSMUSG00000022515.7	Anks3	chr16	protein_coding	ankyrin repeat and sterile alpha motif domain containing 3
chr16	4782316	4783357	+	4782254	4783357	A5SS	0.33	50	50	ENSMUST00000090457.7	ENSMUSG00000022543.10	4930451G09Rik	chr16	transcribed_unitary_pseudogene	RIKEN cDNA 4930451G09 gene
chr16	4782634	4783357	+	4782254	4783357	A5SS	0.33	50	50	ENSMUST00000090457.7	ENSMUSG00000022543.10	4930451G09Rik	chr16	transcribed_unitary_pseudogene	RIKEN cDNA 4930451G09 gene
chr16	4782634	4783357	+	4782316	4783357	A5SS	0.33	50	50	ENSMUST00000231040.2	ENSMUSG00000022543.10	4930451G09Rik	chr16	transcribed_unitary_pseudogene	RIKEN cDNA 4930451G09 gene
chr16	4805522	4806343	-	4805522;4805662	4805611;4806343	ES	0.5	50	50	ENSMUST00000230362.2	ENSMUSG00000022542.8	Septin12	chr16	protein_coding	septin 12
chr16	4825282	4825608	+	4825189	4825608	A5SS	0.5	50	50	ENSMUST00000184439.8	ENSMUSG00000096215.9	Smim22	chr16	protein_coding	small integral membrane protein 22
chr16	4825282	4825836	+	4825752	4825836	A5SS&ES	0.5	50	50	ENSMUST00000184439.8	ENSMUSG00000096215.9	Smim22	chr16	protein_coding	small integral membrane protein 22
chr16	4825918	4826070	+	4825933	4826070	A5SS	0.5	50	50	ENSMUST00000184439.8	ENSMUSG00000096215.9	Smim22	chr16	protein_coding	small integral membrane protein 22
chr16	4825282	4825608	+	4825282	4825638	A3SS	0.33	50	50	ENSMUST00000183821.2	ENSMUSG00000096215.9	Smim22	chr16	protein_coding	small integral membrane protein 22
chr16	4825282	4825836	+	4825282	4825638	A3SS	0.33	50	50	ENSMUST00000183821.2	ENSMUSG00000096215.9	Smim22	chr16	protein_coding	small integral membrane protein 22
chr16	4825282	4825836	+	4825282;4825752	4825608;4825836	ES	0.5	50	50	ENSMUST00000178155.9	ENSMUSG00000096215.9	Smim22	chr16	protein_coding	small integral membrane protein 22
chr16	4825282	4825836	+	4825282;4825752	4825638;4825836	ES	0.5	50	50	ENSMUST00000184256.7	ENSMUSG00000096215.9	Smim22	chr16	protein_coding	small integral membrane protein 22
chr16	4827870	4828331	-	4828017	4828331	A3SS&ES	0.5	50	50	ENSMUST00000202281.4	ENSMUSG00000022540.17	Rogdi	chr16	protein_coding	rogdi homolog
chr16	4828760	4829476	-	4828806	4829476	A3SS	0.5	50	50	ENSMUST00000202281.4	ENSMUSG00000022540.17	Rogdi	chr16	protein_coding	rogdi homolog
chr16	4829622	4830105	-	4829556	4830105	A3SS	0.5	50	50	ENSMUST00000202281.4	ENSMUSG00000022540.17	Rogdi	chr16	protein_coding	rogdi homolog
chr16	4839294	4844372	-	4839312	4844372	A3SS	0.5	50	50	ENSMUST00000115844.3	ENSMUSG00000022536.15	Glyr1	chr16	protein_coding	glyoxylate reductase 1 homolog (Arabidopsis)
chr16	4899525	4901920	+	4899525;4899847	4899758;4901920	ES	0.33	50	50	ENSMUST00000230703.2	ENSMUSG00000039473.9	Ubn1	chr16	protein_coding	ubinuclein 1
chr16	4868645;4871705	4871592;4872941	+	4868645	4872941	cassetteExon	0.5	100	100	ENSMUST00000230703.2	ENSMUSG00000039473.9	Ubn1	chr16	protein_coding	ubinuclein 1
chr16	4882650	4888414	+	4882650	4888513	A3SS	0.5	50	50	ENSMUST00000230703.2	ENSMUSG00000039473.9	Ubn1	chr16	protein_coding	ubinuclein 1
chr16	4895979	4901920	+	4895979;4899525	4899282;4901920	ES	0.33	50	50	ENSMUST00000229126.2	ENSMUSG00000039473.9	Ubn1	chr16	protein_coding	ubinuclein 1
chr16	4895979	4901920	+	4895979	4899282	3pMXE	0.5	50	50	ENSMUST00000229355.2	ENSMUSG00000039473.9	Ubn1	chr16	protein_coding	ubinuclein 1
chr16	4899847	4901920	+	4895979	4901920	A5SS	0.33	50	50	ENSMUST00000229386.2	ENSMUSG00000039473.9	Ubn1	chr16	protein_coding	ubinuclein 1
chr16	4965059	4965609	+	4964993	4965609	A5SS	0.5	50	50	ENSMUST00000165810.2	ENSMUSG00000091712.3	Sec14l5	chr16	protein_coding	SEC14-like lipid binding 5
chr16	5013835	5015419	-	5013922	5015419	A3SS	0.5	50	50	ENSMUST00000147567.2	ENSMUSG00000023143.11	Nagpa	chr16	protein_coding	N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase
chr16	5051721	5053027	+	5051721;5052907	5052830;5053027	ES	0.5	50	50	ENSMUST00000100196.9	ENSMUSG00000039427.15	Alg1	chr16	protein_coding	asparagine-linked glycosylation 1 (beta-1,4-mannosyltransferase)
chr16	5053130	5056509	+	5053130;5054332	5054184;5056509	ES	0.5	50	50	ENSMUST00000100196.9	ENSMUSG00000039427.15	Alg1	chr16	protein_coding	asparagine-linked glycosylation 1 (beta-1,4-mannosyltransferase)
chr16	5066694	5067211	-	5066694;5066909	5066776;5067211	ES	0.5	50	50	ENSMUST00000064635.12	ENSMUSG00000022544.15	Eef2kmt	chr16	protein_coding	eukaryotic elongation factor 2 lysine methyltransferase
chr16	5068419	5069037	-	5068419	5070889	A5SS	0.5	50	50	ENSMUST00000064635.12	ENSMUSG00000022544.15	Eef2kmt	chr16	protein_coding	eukaryotic elongation factor 2 lysine methyltransferase
chr16	7111994	7148226	+	7111994;7124325	7124272;7148226	ES	0.5	50	50	ENSMUST00000230658.2	ENSMUSG00000008658.17	Rbfox1	chr16	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 1
chr16	5703728	5703984	+	5703728	5991469	A3SS	0.5	50	50	ENSMUST00000230658.2	ENSMUSG00000008658.17	Rbfox1	chr16	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 1
chr16	6167095	6305683	+	5991531	6305683	A5SS	0.5	50	50	ENSMUST00000230658.2	ENSMUSG00000008658.17	Rbfox1	chr16	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 1
chr16	6887949	7042175	+	6627112	7042175	A5SS	0.33	50	50	ENSMUST00000230658.2	ENSMUSG00000008658.17	Rbfox1	chr16	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 1
chr16	7011741	7042175	+	6627112	7042175	A5SS	0.33	50	50	ENSMUST00000230658.2	ENSMUSG00000008658.17	Rbfox1	chr16	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 1
chr16	7170928;7187707	7187665;7193769	+	7170928;7181768	7181729;7193769	MXE	0.5	100	100	ENSMUST00000056416.9	ENSMUSG00000008658.17	Rbfox1	chr16	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 1
chr16	7011741	7042175	+	6887949	7042175	A5SS	0.33	50	50	ENSMUST00000229741.2	ENSMUSG00000008658.17	Rbfox1	chr16	protein_coding	RNA binding protein, fox-1 homolog (C. elegans) 1
chr16	8288729	8295831	+	8288729;8291830	8291695;8295831	ES	0.5	50	50	ENSMUST00000046470.16	ENSMUSG00000039345.17	Mettl22	chr16	protein_coding	methyltransferase like 22
chr16	8288729	8291695	+	8288729	8300120	A3SS	0.33	50	50	ENSMUST00000150790.2	ENSMUSG00000039345.17	Mettl22	chr16	protein_coding	methyltransferase like 22
chr16	8288729	8295831	+	8288729	8300120	A3SS	0.33	50	50	ENSMUST00000150790.2	ENSMUSG00000039345.17	Mettl22	chr16	protein_coding	methyltransferase like 22
chr16	8300031	8300120	+	8288729	8300120	A5SS	0.5	50	50	ENSMUST00000150790.2	ENSMUSG00000039345.17	Mettl22	chr16	protein_coding	methyltransferase like 22
chr16	8426857	8431847	+	8426857;8429158	8428991;8431847	ES	0.33	50	50	ENSMUST00000065987.14	ENSMUSG00000057880.13	Abat	chr16	protein_coding	4-aminobutyrate aminotransferase
chr16	8400646	8406750	+	8400718	8406750	A5SS	0.33	50	50	ENSMUST00000065987.14	ENSMUSG00000057880.13	Abat	chr16	protein_coding	4-aminobutyrate aminotransferase
chr16	8401519	8406750	+	8400718	8406750	A5SS	0.33	50	50	ENSMUST00000065987.14	ENSMUSG00000057880.13	Abat	chr16	protein_coding	4-aminobutyrate aminotransferase
chr16	8430795	8431847	+	8429158	8431847	A5SS	0.33	50	50	ENSMUST00000065987.14	ENSMUSG00000057880.13	Abat	chr16	protein_coding	4-aminobutyrate aminotransferase
chr16	8430795	8431847	+	8426857	8431847	A5SS	0.33	50	50	ENSMUST00000115839.9	ENSMUSG00000057880.13	Abat	chr16	protein_coding	4-aminobutyrate aminotransferase
chr16	8401519	8406750	+	8400646	8406750	A5SS	0.33	50	50	ENSMUST00000138987.8	ENSMUSG00000057880.13	Abat	chr16	protein_coding	4-aminobutyrate aminotransferase
chr16	8473552	8479320	+	8473552	8474420	3pMXE	0.5	50	50	ENSMUST00000023396.10	ENSMUSG00000022711.17	Pmm2	chr16	protein_coding	phosphomannomutase 2
chr16	8455999	8460602	+	8455692	8460602	A5SS	0.5	50	50	ENSMUST00000023396.10	ENSMUSG00000022711.17	Pmm2	chr16	protein_coding	phosphomannomutase 2
chr16	8501267	8501457	+	8501267	8501622	A3SS	0.5	50	50	ENSMUST00000201722.2	ENSMUSG00000107252.2	Gm5767	chr16	protein_coding	predicted gene 5767
chr16	8530056;8533783	8533609;8534379	-	8530056	8534379	cassetteExon	0.5	100	100	ENSMUST00000160405.8	ENSMUSG00000022710.18	Usp7	chr16	protein_coding	ubiquitin specific peptidase 7
chr16	8516673	8517007	-	8516714	8517007	A3SS	0.5	50	50	ENSMUST00000160405.8	ENSMUSG00000022710.18	Usp7	chr16	protein_coding	ubiquitin specific peptidase 7
chr16	8528041	8529997	-	8528041	8529858	A5SS	0.5	50	50	ENSMUST00000160405.8	ENSMUSG00000022710.18	Usp7	chr16	protein_coding	ubiquitin specific peptidase 7
chr16	8534483	8539479	-	8534483	8574680	A5SS	0.33	50	50	ENSMUST00000160405.8	ENSMUSG00000022710.18	Usp7	chr16	protein_coding	ubiquitin specific peptidase 7
chr16	8534483	8556068	-	8534483	8574680	A5SS	0.33	50	50	ENSMUST00000160405.8	ENSMUSG00000022710.18	Usp7	chr16	protein_coding	ubiquitin specific peptidase 7
chr16	8534483	8539479	-	8534483	8556068	A5SS	0.33	50	50	ENSMUST00000160326.8	ENSMUSG00000022710.18	Usp7	chr16	protein_coding	ubiquitin specific peptidase 7
chr16	9579847	9615081	-	9579847	9809984	A5SS	0.5	50	50	ENSMUST00000199708.5	ENSMUSG00000059003.13	Grin2a	chr16	protein_coding	glutamate receptor, ionotropic, NMDA2A (epsilon 1)
chr16	9988355	9992145	+	9988355	9992121	A3SS	0.5	50	50	ENSMUST00000121292.8	ENSMUSG00000039209.13	Rpl39l	chr16	protein_coding	ribosomal protein L39-like
chr16	10055096	10065309	+	10055096	10058425	3pMXE	0.5	50	50	ENSMUST00000117220.8	ENSMUSG00000039200.17	Atf7ip2	chr16	protein_coding	activating transcription factor 7 interacting protein 2
chr16	10146284	10165219	-	10146284	10148833	5pMXE	0.5	50	50	ENSMUST00000230588.2	ENSMUSG00000116270.2	Gm1600	chr16	lncRNA	predicted gene 1600
chr16	10237549	10238838	+	10237549;10238210	10238120;10238838	ES	0.5	50	50	ENSMUST00000023146.5	ENSMUSG00000022503.11	Nubp1	chr16	protein_coding	nucleotide binding protein 1
chr16	10239543;10239849	10239735;10240686	+	10239543	10240686	cassetteExon	0.5	100	100	ENSMUST00000023146.5	ENSMUSG00000022503.11	Nubp1	chr16	protein_coding	nucleotide binding protein 1
chr16	10237549	10238838	+	10237549	10238120	3pMXE	0.5	50	50	ENSMUST00000129280.8	ENSMUSG00000022503.11	Nubp1	chr16	protein_coding	nucleotide binding protein 1
chr16	10245336	10264794	-	10245336;10246667	10246523;10264794	ES	0.5	50	50	ENSMUST00000051118.7	ENSMUSG00000050908.13	Tvp23a	chr16	protein_coding	trans-golgi network vesicle protein 23A
chr16	10245336;10245975	10245922;10246523	-	10245336	10246523	cassetteExon	0.5	100	100	ENSMUST00000051118.7	ENSMUSG00000050908.13	Tvp23a	chr16	protein_coding	trans-golgi network vesicle protein 23A
chr16	10245336;10246001	10245922;10246523	-	10245336	10246523	cassetteExon	0.5	100	100	ENSMUST00000051118.7	ENSMUSG00000050908.13	Tvp23a	chr16	protein_coding	trans-golgi network vesicle protein 23A
chr16	10241225	10242063	-	10240749	10242063	A3SS	0.5	50	50	ENSMUST00000051118.7	ENSMUSG00000050908.13	Tvp23a	chr16	protein_coding	trans-golgi network vesicle protein 23A
chr16	10245336	10245922	-	10245336	10264794	A5SS	0.33	50	50	ENSMUST00000128288.8	ENSMUSG00000050908.13	Tvp23a	chr16	protein_coding	trans-golgi network vesicle protein 23A
chr16	10245975	10246523	-	10246001	10246523	A3SS	0.33	50	50	ENSMUST00000135315.8	ENSMUSG00000050908.13	Tvp23a	chr16	protein_coding	trans-golgi network vesicle protein 23A
chr16	10298290;10311738	10311511;10319631	+	10298290	10319631	cassetteExon	0.5	100	100	ENSMUST00000230395.2	ENSMUSG00000022504.11	Ciita	chr16	protein_coding	class II transactivator
chr16	10336250	10336362	+	10336250	10338832	A3SS	0.5	50	50	ENSMUST00000230395.2	ENSMUSG00000022504.11	Ciita	chr16	protein_coding	class II transactivator
chr16	10306288	10319631	+	10298290	10319631	A5SS	0.25	50	50	ENSMUST00000230395.2	ENSMUSG00000022504.11	Ciita	chr16	protein_coding	class II transactivator
chr16	10307728	10319631	+	10298290	10319631	A5SS	0.25	50	50	ENSMUST00000230395.2	ENSMUSG00000022504.11	Ciita	chr16	protein_coding	class II transactivator
chr16	10306288	10319631	+	10311738	10319631	A5SS&ES	0.25	50	50	ENSMUST00000230450.2	ENSMUSG00000022504.11	Ciita	chr16	protein_coding	class II transactivator
chr16	10307728	10311511	+	10298290	10311511	A5SS	0.5	50	50	ENSMUST00000230450.2	ENSMUSG00000022504.11	Ciita	chr16	protein_coding	class II transactivator
chr16	10307728	10319631	+	10311738	10319631	A5SS&ES	0.25	50	50	ENSMUST00000230450.2	ENSMUSG00000022504.11	Ciita	chr16	protein_coding	class II transactivator
chr16	10307728	10319631	+	10306288	10319631	A5SS	0.25	50	50	ENSMUST00000229906.2	ENSMUSG00000022504.11	Ciita	chr16	protein_coding	class II transactivator
chr16	10307728	10319631	+	10307728;10311738	10311511;10319631	ES	0.5	50	50	ENSMUST00000230892.2	ENSMUSG00000022504.11	Ciita	chr16	protein_coding	class II transactivator
chr16	10307728	10308561	+	10307728	10311511	A3SS	0.33	50	50	ENSMUST00000230892.2	ENSMUSG00000022504.11	Ciita	chr16	protein_coding	class II transactivator
chr16	10307728	10308561	+	10307728	10319631	A3SS	0.33	50	50	ENSMUST00000230146.2	ENSMUSG00000022504.11	Ciita	chr16	protein_coding	class II transactivator
chr16	10348676	10360136	-	10337031	10360136	A3SS	0.5	50	50	ENSMUST00000184863.8	ENSMUSG00000038055.13	Dexi	chr16	protein_coding	dexamethasone-induced transcript
chr16	10348676	10360136	-	10348676	10349464	5pMXE	0.5	50	50	ENSMUST00000183355.8	ENSMUSG00000038055.13	Dexi	chr16	protein_coding	dexamethasone-induced transcript
chr16	10389463	10391164	+	10389463;10389538	10389533;10391164	ES	0.33	50	50	ENSMUST00000115824.10	ENSMUSG00000068663.15	Clec16a	chr16	protein_coding	C-type lectin domain family 16, member A
chr16	10456779	10506344	+	10456779;10462745	10462625;10506344	ES	0.5	50	50	ENSMUST00000115824.10	ENSMUSG00000068663.15	Clec16a	chr16	protein_coding	C-type lectin domain family 16, member A
chr16	10389463;10390787	10390782;10391164	+	10389463;10389538	10389533;10391164	MXE	0.5	100	100	ENSMUST00000115824.10	ENSMUSG00000068663.15	Clec16a	chr16	protein_coding	C-type lectin domain family 16, member A
chr16	10549683;10556379	10556256;10559478	+	10549683	10559478	cassetteExon	0.5	100	100	ENSMUST00000115824.10	ENSMUSG00000068663.15	Clec16a	chr16	protein_coding	C-type lectin domain family 16, member A
chr16	10363506	10377481	+	10363506	10377885	A3SS	0.5	50	50	ENSMUST00000115824.10	ENSMUSG00000068663.15	Clec16a	chr16	protein_coding	C-type lectin domain family 16, member A
chr16	10448665	10449358	+	10448665	10453110	A3SS	0.5	50	50	ENSMUST00000115824.10	ENSMUSG00000068663.15	Clec16a	chr16	protein_coding	C-type lectin domain family 16, member A
chr16	10456779	10459104	+	10456779	10462625	A3SS	0.33	50	50	ENSMUST00000115824.10	ENSMUSG00000068663.15	Clec16a	chr16	protein_coding	C-type lectin domain family 16, member A
chr16	10512654	10539137	+	10512654	10549525	A3SS	0.5	50	50	ENSMUST00000115824.10	ENSMUSG00000068663.15	Clec16a	chr16	protein_coding	C-type lectin domain family 16, member A
chr16	10413897	10428867	+	10413849	10428867	A5SS	0.25	50	50	ENSMUST00000115824.10	ENSMUSG00000068663.15	Clec16a	chr16	protein_coding	C-type lectin domain family 16, member A
chr16	10418581	10428867	+	10413849	10428867	A5SS	0.25	50	50	ENSMUST00000115824.10	ENSMUSG00000068663.15	Clec16a	chr16	protein_coding	C-type lectin domain family 16, member A
chr16	10428743	10428867	+	10413849	10428867	A5SS	0.25	50	50	ENSMUST00000115824.10	ENSMUSG00000068663.15	Clec16a	chr16	protein_coding	C-type lectin domain family 16, member A
chr16	10389463;10390787	10390782;10391164	+	10389463	10391164	cassetteExon	0.5	100	100	ENSMUST00000155633.8	ENSMUSG00000068663.15	Clec16a	chr16	protein_coding	C-type lectin domain family 16, member A
chr16	10418581	10428867	+	10413897	10428867	A5SS	0.25	50	50	ENSMUST00000115827.8	ENSMUSG00000068663.15	Clec16a	chr16	protein_coding	C-type lectin domain family 16, member A
chr16	10428743	10428867	+	10413897	10428867	A5SS	0.25	50	50	ENSMUST00000115827.8	ENSMUSG00000068663.15	Clec16a	chr16	protein_coding	C-type lectin domain family 16, member A
chr16	10456779	10459104	+	10456779	10506344	A3SS	0.33	50	50	ENSMUST00000115828.9	ENSMUSG00000068663.15	Clec16a	chr16	protein_coding	C-type lectin domain family 16, member A
chr16	10428743	10428867	+	10418581	10428867	A5SS	0.25	50	50	ENSMUST00000115823.2	ENSMUSG00000068663.15	Clec16a	chr16	protein_coding	C-type lectin domain family 16, member A
chr16	10602785	10603295	-	10602905	10603295	A3SS	0.5	50	50	ENSMUST00000229866.2	ENSMUSG00000038037.6	Socs1	chr16	protein_coding	suppressor of cytokine signaling 1
chr16	10653254	10703962	+	10653254	10657693	3pMXE	0.5	50	50	ENSMUST00000037913.9	ENSMUSG00000037991.10	Rmi2	chr16	protein_coding	RecQ mediated genome instability 2
chr16	10730555	10731258	-	10730451	10731258	A3SS	0.5	50	50	ENSMUST00000233200.2	ENSMUSG00000117309.2	Gm49960	chr16	transcribed_unitary_pseudogene	predicted gene, 49960
chr16	10752444	10755064	-	10752444	10756158	A5SS	0.5	50	50	ENSMUST00000233200.2	ENSMUSG00000117309.2	Gm49960	chr16	transcribed_unitary_pseudogene	predicted gene, 49960
chr16	10731838	10748791	-	10731838	10732572	5pMXE	0.5	50	50	ENSMUST00000178424.2	ENSMUSG00000095369.3	Gm21859	chr16	lncRNA	predicted gene, 21859
chr16	10744004	10748791	-	10731838	10748791	A3SS	0.5	50	50	ENSMUST00000233047.2	ENSMUSG00000095369.3	Gm21859	chr16	lncRNA	predicted gene, 21859
chr16	10752202	10752279	-	10748914	10752279	A3SS	0.5	50	50	ENSMUST00000233047.2	ENSMUSG00000095369.3	Gm21859	chr16	lncRNA	predicted gene, 21859
chr16	10748914	10751285	-	10748914	10752279	A5SS	0.5	50	50	ENSMUST00000233047.2	ENSMUSG00000095369.3	Gm21859	chr16	lncRNA	predicted gene, 21859
chr16	10784513	10883862	-	10784513	10810910	5pMXE	0.33	50	50	ENSMUST00000023143.14	ENSMUSG00000022500.16	Litaf	chr16	protein_coding	LPS-induced TN factor
chr16	10784513	10793291	-	10784513	10810910	A5SS	0.33	50	50	ENSMUST00000023143.14	ENSMUSG00000022500.16	Litaf	chr16	protein_coding	LPS-induced TN factor
chr16	10784513	10883862	-	10784513	10793291	5pMXE	0.33	50	50	ENSMUST00000117360.8	ENSMUSG00000022500.16	Litaf	chr16	protein_coding	LPS-induced TN factor
chr16	10880469	10883862	-	10784513	10883862	A3SS	0.5	50	50	ENSMUST00000162323.2	ENSMUSG00000022500.16	Litaf	chr16	protein_coding	LPS-induced TN factor
chr16	10884311	10890096	+	10878903	10890096	A5SS	0.5	50	50	ENSMUST00000228962.2	ENSMUSG00000037972.8	Snn	chr16	protein_coding	stannin
chr16	10909650	10922430	-	10909650;10911792	10911680;10922430	ES	0.5	50	50	ENSMUST00000038424.14	ENSMUSG00000022498.17	Txndc11	chr16	protein_coding	thioredoxin domain containing 11
chr16	10940631	10952132	-	10940631;10946567	10946351;10952132	ES	0.33	50	50	ENSMUST00000038424.14	ENSMUSG00000022498.17	Txndc11	chr16	protein_coding	thioredoxin domain containing 11
chr16	10924135	10934659	-	10922523	10934659	A3SS	0.5	50	50	ENSMUST00000038424.14	ENSMUSG00000022498.17	Txndc11	chr16	protein_coding	thioredoxin domain containing 11
chr16	10946569	10952132	-	10946567	10952132	A3SS	0.33	50	50	ENSMUST00000038424.14	ENSMUSG00000022498.17	Txndc11	chr16	protein_coding	thioredoxin domain containing 11
chr16	10902757	10904759	-	10902757	10905641	A5SS	0.5	50	50	ENSMUST00000038424.14	ENSMUSG00000022498.17	Txndc11	chr16	protein_coding	thioredoxin domain containing 11
chr16	10909650;10911792	10911680;10940534	-	10909650;10934788	10922430;10940534	MXE	0.5	100	100	ENSMUST00000145225.8	ENSMUSG00000022498.17	Txndc11	chr16	protein_coding	thioredoxin domain containing 11
chr16	10934788	10940534	-	10911792	10940534	A3SS	0.5	50	50	ENSMUST00000131012.2	ENSMUSG00000022498.17	Txndc11	chr16	protein_coding	thioredoxin domain containing 11
chr16	10909650	10922430	-	10909650	10911680	A5SS&ES	0.5	50	50	ENSMUST00000131012.2	ENSMUSG00000022498.17	Txndc11	chr16	protein_coding	thioredoxin domain containing 11
chr16	10911792	10922430	-	10911792	10940534	A5SS	0.5	50	50	ENSMUST00000131012.2	ENSMUSG00000022498.17	Txndc11	chr16	protein_coding	thioredoxin domain containing 11
chr16	10940631;10946569	10946351;10952132	-	10940631	10952132	cassetteExon	0.5	100	100	ENSMUST00000155221.8	ENSMUSG00000022498.17	Txndc11	chr16	protein_coding	thioredoxin domain containing 11
chr16	10969794;10970195	10970056;10970923	-	10969794	10970923	cassetteExon	0.5	100	100	ENSMUST00000037633.16	ENSMUSG00000037965.16	Zc3h7a	chr16	protein_coding	zinc finger CCCH type containing 7 A
chr16	10959635	10963106	-	10959635	10963044	A5SS	0.5	50	50	ENSMUST00000037633.16	ENSMUSG00000037965.16	Zc3h7a	chr16	protein_coding	zinc finger CCCH type containing 7 A
chr16	10982557	10991949	-	10982557	10994084	A5SS	0.16	50	50	ENSMUST00000037633.16	ENSMUSG00000037965.16	Zc3h7a	chr16	protein_coding	zinc finger CCCH type containing 7 A
chr16	10982557	10992732	-	10982557	10994084	A5SS	0.16	50	50	ENSMUST00000037633.16	ENSMUSG00000037965.16	Zc3h7a	chr16	protein_coding	zinc finger CCCH type containing 7 A
chr16	10982557	10993377	-	10982557	10994084	A5SS	0.16	50	50	ENSMUST00000037633.16	ENSMUSG00000037965.16	Zc3h7a	chr16	protein_coding	zinc finger CCCH type containing 7 A
chr16	10982557	10993801	-	10982557	10994084	A5SS	0.16	50	50	ENSMUST00000037633.16	ENSMUSG00000037965.16	Zc3h7a	chr16	protein_coding	zinc finger CCCH type containing 7 A
chr16	10982557	10993857	-	10982557	10994084	A5SS	0.16	50	50	ENSMUST00000037633.16	ENSMUSG00000037965.16	Zc3h7a	chr16	protein_coding	zinc finger CCCH type containing 7 A
chr16	10982557	10991949	-	10982557	10993857	A5SS	0.16	50	50	ENSMUST00000138185.9	ENSMUSG00000037965.16	Zc3h7a	chr16	protein_coding	zinc finger CCCH type containing 7 A
chr16	10982557	10992732	-	10982557	10993857	A5SS	0.16	50	50	ENSMUST00000138185.9	ENSMUSG00000037965.16	Zc3h7a	chr16	protein_coding	zinc finger CCCH type containing 7 A
chr16	10982557	10993377	-	10982557	10993857	A5SS	0.16	50	50	ENSMUST00000138185.9	ENSMUSG00000037965.16	Zc3h7a	chr16	protein_coding	zinc finger CCCH type containing 7 A
chr16	10982557	10993801	-	10982557	10993857	A5SS	0.16	50	50	ENSMUST00000138185.9	ENSMUSG00000037965.16	Zc3h7a	chr16	protein_coding	zinc finger CCCH type containing 7 A
chr16	10982557	10992732	-	10982557;10992122	10991949;10992732	ES	0.5	50	50	ENSMUST00000128083.9	ENSMUSG00000037965.16	Zc3h7a	chr16	protein_coding	zinc finger CCCH type containing 7 A
chr16	10982557	10993377	-	10982557	10992732	5pMXE	0.16	50	50	ENSMUST00000130355.9	ENSMUSG00000037965.16	Zc3h7a	chr16	protein_coding	zinc finger CCCH type containing 7 A
chr16	10982557	10993801	-	10982557	10992732	5pMXE	0.16	50	50	ENSMUST00000130355.9	ENSMUSG00000037965.16	Zc3h7a	chr16	protein_coding	zinc finger CCCH type containing 7 A
chr16	10982557	10993801	-	10982557	10993377	5pMXE	0.16	50	50	ENSMUST00000125537.9	ENSMUSG00000037965.16	Zc3h7a	chr16	protein_coding	zinc finger CCCH type containing 7 A
chr16	10982557	10991949	-	10982557	10993377	A5SS	0.16	50	50	ENSMUST00000125537.9	ENSMUSG00000037965.16	Zc3h7a	chr16	protein_coding	zinc finger CCCH type containing 7 A
chr16	10982557	10991949	-	10982557	10993801	A5SS	0.16	50	50	ENSMUST00000142389.3	ENSMUSG00000037965.16	Zc3h7a	chr16	protein_coding	zinc finger CCCH type containing 7 A
chr16	11019294	11021015	-	11019294;11020321	11020182;11021015	ES	0.5	50	50	ENSMUST00000119953.2	ENSMUSG00000005846.13	Rsl1d1	chr16	protein_coding	ribosomal L1 domain containing 1
chr16	11017583	11019159	-	11014260	11019159	A3SS	0.5	50	50	ENSMUST00000230002.2	ENSMUSG00000005846.13	Rsl1d1	chr16	protein_coding	ribosomal L1 domain containing 1
chr16	11014260	11014337	-	11014260	11019159	A5SS	0.5	50	50	ENSMUST00000230002.2	ENSMUSG00000005846.13	Rsl1d1	chr16	protein_coding	ribosomal L1 domain containing 1
chr16	11021611;11025440	11025356;11041101	+	11021611	11041101	cassetteExon	0.5	100	100	ENSMUST00000181526.3	ENSMUSG00000097537.3	2610020C07Rik	chr16	lncRNA	RIKEN cDNA 2610020C07 gene
chr16	11041219	11063516	+	11041219	11041989	3pMXE	0.5	50	50	ENSMUST00000229756.2	ENSMUSG00000097537.3	2610020C07Rik	chr16	lncRNA	RIKEN cDNA 2610020C07 gene
chr16	11040617	11042284	-	11040617;11041165	11041076;11042284	ES	0.5	50	50	ENSMUST00000167571.8	ENSMUSG00000062203.16	Gspt1	chr16	protein_coding	G1 to S phase transition 1
chr16	11056963	11058530	-	11056960	11058530	A3SS	0.5	50	50	ENSMUST00000167571.8	ENSMUSG00000062203.16	Gspt1	chr16	protein_coding	G1 to S phase transition 1
chr16	11236762	11238565	+	11236762	11238568	A3SS	0.5	50	50	ENSMUST00000180792.8	ENSMUSG00000071669.15	Snx29	chr16	protein_coding	sorting nexin 29
chr16	11478491	11494986	+	11478491	11532778	A3SS	0.5	50	50	ENSMUST00000180792.8	ENSMUSG00000071669.15	Snx29	chr16	protein_coding	sorting nexin 29
chr16	11223651	11231090	+	11221696	11231090	A5SS	0.33	50	50	ENSMUST00000180792.8	ENSMUSG00000071669.15	Snx29	chr16	protein_coding	sorting nexin 29
chr16	11224760	11231090	+	11221696	11231090	A5SS	0.33	50	50	ENSMUST00000180792.8	ENSMUSG00000071669.15	Snx29	chr16	protein_coding	sorting nexin 29
chr16	11224760	11231090	+	11223651	11231090	A5SS	0.33	50	50	ENSMUST00000096273.9	ENSMUSG00000071669.15	Snx29	chr16	protein_coding	sorting nexin 29
chr16	11705660;11712818	11712747;11727130	-	11705660	11727130	cassetteExon	0.5	100	100	ENSMUST00000096272.11	ENSMUSG00000065979.13	Cpped1	chr16	protein_coding	calcineurin-like phosphoesterase domain containing 1
chr16	11703609	11705442	-	11646461	11705442	A3SS	0.5	50	50	ENSMUST00000096272.11	ENSMUSG00000065979.13	Cpped1	chr16	protein_coding	calcineurin-like phosphoesterase domain containing 1
chr16	11705618	11727130	-	11705660	11727130	A3SS	0.33	50	50	ENSMUST00000096272.11	ENSMUSG00000065979.13	Cpped1	chr16	protein_coding	calcineurin-like phosphoesterase domain containing 1
chr16	11712818	11727130	-	11705618	11727130	A3SS	0.33	50	50	ENSMUST00000121750.2	ENSMUSG00000065979.13	Cpped1	chr16	protein_coding	calcineurin-like phosphoesterase domain containing 1
chr16	11803007	11813147	+	11803007;11811914	11811858;11813147	ES	0.5	50	50	ENSMUST00000182889.2	ENSMUSG00000022494.16	Shisa9	chr16	protein_coding	shisa family member 9
chr16	11803007	11807857	+	11803007	11811858	A3SS	0.33	50	50	ENSMUST00000182889.2	ENSMUSG00000022494.16	Shisa9	chr16	protein_coding	shisa family member 9
chr16	11815044	12062472	+	11815044	11847892	3pMXE	0.5	50	50	ENSMUST00000232469.2	ENSMUSG00000022494.16	Shisa9	chr16	protein_coding	shisa family member 9
chr16	11803007	11807857	+	11803007	11814917	A3SS	0.25	50	50	ENSMUST00000232469.2	ENSMUSG00000022494.16	Shisa9	chr16	protein_coding	shisa family member 9
chr16	11803007	11811858	+	11803007	11814917	A3SS	0.25	50	50	ENSMUST00000232469.2	ENSMUSG00000022494.16	Shisa9	chr16	protein_coding	shisa family member 9
chr16	11803007	11813147	+	11803007	11814917	A3SS	0.25	50	50	ENSMUST00000232469.2	ENSMUSG00000022494.16	Shisa9	chr16	protein_coding	shisa family member 9
chr16	12062627	12085288	+	12062627;12070696	12070649;12085288	ES	0.5	50	50	ENSMUST00000170672.9	ENSMUSG00000022494.16	Shisa9	chr16	protein_coding	shisa family member 9
chr16	11803007	11813147	+	11803007	11807857	3pMXE	0.25	50	50	ENSMUST00000182154.2	ENSMUSG00000022494.16	Shisa9	chr16	protein_coding	shisa family member 9
chr16	12629386	12636027	+	12620240	12636027	A5SS	0.5	50	50	ENSMUST00000231680.2	ENSMUSG00000101565.3	1700003L19Rik	chr16	lncRNA	RIKEN cDNA 1700003L19 gene
chr16	12929748	12939860	+	12929775	12939860	A5SS	0.5	50	50	ENSMUST00000023206.14	ENSMUSG00000022545.14	Ercc4	chr16	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 4
chr16	12944691	12945419	+	12944387	12945419	A5SS	0.5	50	50	ENSMUST00000023206.14	ENSMUSG00000022545.14	Ercc4	chr16	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 4
chr16	12948886	12950722	+	12948598	12950722	A5SS	0.5	50	50	ENSMUST00000023206.14	ENSMUSG00000022545.14	Ercc4	chr16	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 4
chr16	13144435	13149878	+	13144435	13196128	A3SS	0.5	50	50	ENSMUST00000009713.14	ENSMUSG00000009569.15	Mrtfb	chr16	protein_coding	myocardin related transcription factor B
chr16	13176623	13196128	+	13144435	13196128	A5SS	0.5	50	50	ENSMUST00000009713.14	ENSMUSG00000009569.15	Mrtfb	chr16	protein_coding	myocardin related transcription factor B
chr16	13204007	13222458	-	13183762	13222458	A3SS	0.33	50	50	ENSMUST00000210378.2	ENSMUSG00000087526.3	Gm15738	chr16	lncRNA	predicted gene 15738
chr16	13215146	13222458	-	13183762	13222458	A3SS	0.33	50	50	ENSMUST00000210378.2	ENSMUSG00000087526.3	Gm15738	chr16	lncRNA	predicted gene 15738
chr16	13285787	13286371	-	13285787	13286592	A5SS	0.5	50	50	ENSMUST00000210378.2	ENSMUSG00000087526.3	Gm15738	chr16	lncRNA	predicted gene 15738
chr16	13215146	13222458	-	13204007	13222458	A3SS	0.5	50	50	ENSMUST00000140892.3	ENSMUSG00000087526.3	Gm15738	chr16	lncRNA	predicted gene 15738
chr16	13282410	13284691	+	13281801	13284691	A5SS	0.5	50	50	ENSMUST00000210738.2	ENSMUSG00000109857.2	Gm53058	chr16	lncRNA	predicted gene 53058
chr16	13469700;13470347	13470257;13470509	-	13469700	13470509	cassetteExon	0.5	100	100	ENSMUST00000058884.10	ENSMUSG00000022685.10	Parn	chr16	protein_coding	poly(A)-specific ribonuclease (deadenylation nuclease)
chr16	13469700	13482681	-	13469700	13470509	A5SS&ES	0.33	50	50	ENSMUST00000058884.10	ENSMUSG00000022685.10	Parn	chr16	protein_coding	poly(A)-specific ribonuclease (deadenylation nuclease)
chr16	13469700	13482681	-	13469700	13470257	A5SS&ES	0.33	50	50	ENSMUST00000231003.2	ENSMUSG00000022685.10	Parn	chr16	protein_coding	poly(A)-specific ribonuclease (deadenylation nuclease)
chr16	13505459	13510297	+	13505459;13506789	13506620;13510297	ES	0.33	50	50	ENSMUST00000023365.13	ENSMUSG00000022684.16	Bfar	chr16	protein_coding	bifunctional apoptosis regulator
chr16	13489942	13494698	+	13489942	13502926	A3SS	0.5	50	50	ENSMUST00000023365.13	ENSMUSG00000022684.16	Bfar	chr16	protein_coding	bifunctional apoptosis regulator
chr16	13503262	13510297	+	13503262;13505459	13505255;13510297	ES	0.33	50	50	ENSMUST00000127973.8	ENSMUSG00000022684.16	Bfar	chr16	protein_coding	bifunctional apoptosis regulator
chr16	13506789	13510297	+	13503262	13510297	A5SS	0.33	50	50	ENSMUST00000069281.8	ENSMUSG00000022684.16	Bfar	chr16	protein_coding	bifunctional apoptosis regulator
chr16	13503262	13510297	+	13503262	13505255	3pMXE	0.5	50	50	ENSMUST00000144804.2	ENSMUSG00000022684.16	Bfar	chr16	protein_coding	bifunctional apoptosis regulator
chr16	13545977	13548391	-	13545977	13548221	5pMXE	0.5	50	50	ENSMUST00000115807.9	ENSMUSG00000022683.14	Pla2g10	chr16	protein_coding	phospholipase A2, group X
chr16	13533460	13542973	-	13533460	13542894	A5SS	0.5	50	50	ENSMUST00000115807.9	ENSMUSG00000022683.14	Pla2g10	chr16	protein_coding	phospholipase A2, group X
chr16	13543079	13548396	-	13543079	13545827	A5SS&ES	0.5	50	50	ENSMUST00000023364.7	ENSMUSG00000022683.14	Pla2g10	chr16	protein_coding	phospholipase A2, group X
chr16	13637300	13644924	+	13637300	13644747	3pMXE	0.33	50	50	ENSMUST00000230788.2	ENSMUSG00000022681.16	Ntan1	chr16	protein_coding	N-terminal Asn amidase
chr16	13637300	13645252	+	13637300	13644747	3pMXE	0.33	50	50	ENSMUST00000230788.2	ENSMUSG00000022681.16	Ntan1	chr16	protein_coding	N-terminal Asn amidase
chr16	13637300	13644924	+	13637300;13644849	13644747;13644924	ES	0.5	50	50	ENSMUST00000023362.15	ENSMUSG00000022681.16	Ntan1	chr16	protein_coding	N-terminal Asn amidase
chr16	13650298	13652999	+	13650298;13652658	13652545;13652999	ES	0.5	50	50	ENSMUST00000023362.15	ENSMUSG00000022681.16	Ntan1	chr16	protein_coding	N-terminal Asn amidase
chr16	13649524;13650036	13649974;13650201	+	13649524	13650201	cassetteExon	0.5	100	100	ENSMUST00000023362.15	ENSMUSG00000022681.16	Ntan1	chr16	protein_coding	N-terminal Asn amidase
chr16	13637300;13644989	13644747;13645252	+	13637300	13645252	cassetteExon	0.5	100	100	ENSMUST00000145248.8	ENSMUSG00000022681.16	Ntan1	chr16	protein_coding	N-terminal Asn amidase
chr16	13637300;13644989	13644924;13645252	+	13637300	13645252	cassetteExon	0.5	100	100	ENSMUST00000145248.8	ENSMUSG00000022681.16	Ntan1	chr16	protein_coding	N-terminal Asn amidase
chr16	13650298	13652999	+	13652658	13652999	5pMXE	0.5	50	50	ENSMUST00000139161.2	ENSMUSG00000022681.16	Ntan1	chr16	protein_coding	N-terminal Asn amidase
chr16	13652710	13654907	-	13652710;13654479	13654250;13654907	ES	0.5	50	50	ENSMUST00000023361.12	ENSMUSG00000022680.15	Pdxdc1	chr16	protein_coding	pyridoxal-dependent decarboxylase domain containing 1
chr16	13687745	13693842	-	13687745;13690387	13690319;13693842	ES	0.5	50	50	ENSMUST00000023361.12	ENSMUSG00000022680.15	Pdxdc1	chr16	protein_coding	pyridoxal-dependent decarboxylase domain containing 1
chr16	13699822;13701552	13701428;13702430	-	13699822	13702430	cassetteExon	0.5	100	100	ENSMUST00000023361.12	ENSMUSG00000022680.15	Pdxdc1	chr16	protein_coding	pyridoxal-dependent decarboxylase domain containing 1
chr16	13652652	13654250	-	13652710	13654250	A3SS	0.5	50	50	ENSMUST00000023361.12	ENSMUSG00000022680.15	Pdxdc1	chr16	protein_coding	pyridoxal-dependent decarboxylase domain containing 1
chr16	13668270	13672259	-	13665653	13672259	A3SS	0.5	50	50	ENSMUST00000023361.12	ENSMUSG00000022680.15	Pdxdc1	chr16	protein_coding	pyridoxal-dependent decarboxylase domain containing 1
chr16	13699662	13699742	-	13697436	13699742	A3SS	0.5	50	50	ENSMUST00000023361.12	ENSMUSG00000022680.15	Pdxdc1	chr16	protein_coding	pyridoxal-dependent decarboxylase domain containing 1
chr16	13654167	13656238	-	13651649	13656238	A3SS	0.5	50	50	ENSMUST00000150435.8	ENSMUSG00000022680.15	Pdxdc1	chr16	protein_coding	pyridoxal-dependent decarboxylase domain containing 1
chr16	13652710	13654907	-	13654479	13654907	A3SS&ES	0.5	50	50	ENSMUST00000152450.2	ENSMUSG00000022680.15	Pdxdc1	chr16	protein_coding	pyridoxal-dependent decarboxylase domain containing 1
chr16	13762600	13764393	+	13762600	13764422	A3SS	0.5	50	50	ENSMUST00000128757.8	ENSMUSG00000022679.14	Mpv17l	chr16	protein_coding	Mpv17 transgene, kidney disease mutant-like
chr16	13758575	13762530	+	13721144	13762530	A5SS	0.2	50	50	ENSMUST00000128757.8	ENSMUSG00000022679.14	Mpv17l	chr16	protein_coding	Mpv17 transgene, kidney disease mutant-like
chr16	13758887	13762530	+	13721144	13762530	A5SS	0.2	50	50	ENSMUST00000128757.8	ENSMUSG00000022679.14	Mpv17l	chr16	protein_coding	Mpv17 transgene, kidney disease mutant-like
chr16	13759151	13762530	+	13721144	13762530	A5SS	0.2	50	50	ENSMUST00000128757.8	ENSMUSG00000022679.14	Mpv17l	chr16	protein_coding	Mpv17 transgene, kidney disease mutant-like
chr16	13760037	13762530	+	13721144	13762530	A5SS	0.2	50	50	ENSMUST00000128757.8	ENSMUSG00000022679.14	Mpv17l	chr16	protein_coding	Mpv17 transgene, kidney disease mutant-like
chr16	13758575;13760037	13759984;13762530	+	13758575	13762530	cassetteExon	0.5	100	100	ENSMUST00000141971.8	ENSMUSG00000022679.14	Mpv17l	chr16	protein_coding	Mpv17 transgene, kidney disease mutant-like
chr16	13758887	13762530	+	13758575	13762530	A5SS	0.2	50	50	ENSMUST00000141971.8	ENSMUSG00000022679.14	Mpv17l	chr16	protein_coding	Mpv17 transgene, kidney disease mutant-like
chr16	13759151	13762530	+	13758575	13762530	A5SS	0.2	50	50	ENSMUST00000141971.8	ENSMUSG00000022679.14	Mpv17l	chr16	protein_coding	Mpv17 transgene, kidney disease mutant-like
chr16	13758887	13759984	+	13758575	13759984	A5SS	0.5	50	50	ENSMUST00000124947.8	ENSMUSG00000022679.14	Mpv17l	chr16	protein_coding	Mpv17 transgene, kidney disease mutant-like
chr16	13758887	13762530	+	13760037	13762530	A5SS&ES	0.25	50	50	ENSMUST00000124947.8	ENSMUSG00000022679.14	Mpv17l	chr16	protein_coding	Mpv17 transgene, kidney disease mutant-like
chr16	13759151	13762530	+	13760037	13762530	A5SS&ES	0.25	50	50	ENSMUST00000124947.8	ENSMUSG00000022679.14	Mpv17l	chr16	protein_coding	Mpv17 transgene, kidney disease mutant-like
chr16	13758887;13760037	13759984;13762530	+	13758887	13762530	cassetteExon	0.5	100	100	ENSMUST00000023360.14	ENSMUSG00000022679.14	Mpv17l	chr16	protein_coding	Mpv17 transgene, kidney disease mutant-like
chr16	13759151	13762530	+	13758887	13762530	A5SS	0.2	50	50	ENSMUST00000023360.14	ENSMUSG00000022679.14	Mpv17l	chr16	protein_coding	Mpv17 transgene, kidney disease mutant-like
chr16	13758575	13762530	+	13760037	13762530	A5SS&ES	0.25	50	50	ENSMUST00000148966.2	ENSMUSG00000022679.14	Mpv17l	chr16	protein_coding	Mpv17 transgene, kidney disease mutant-like
chr16	13799856;13801689	13801354;13804494	-	13799856	13804494	cassetteExon	0.5	100	100	ENSMUST00000230206.2	ENSMUSG00000065968.9	Ifitm7	chr16	protein_coding	interferon induced transmembrane protein 7
chr16	13804757	13906810	+	13804757;13867370	13867247;13906810	ES	0.5	50	50	ENSMUST00000056521.12	ENSMUSG00000044117.13	Bmerb1	chr16	protein_coding	bMERB domain containing 1
chr16	13906883	13913768	+	13906883;13911867	13911753;13913768	ES	0.5	50	50	ENSMUST00000056521.12	ENSMUSG00000044117.13	Bmerb1	chr16	protein_coding	bMERB domain containing 1
chr16	13971895	13977538	-	13971895	13977008	5pMXE	0.5	50	50	ENSMUST00000090300.6	ENSMUSG00000060657.9	Marf1	chr16	protein_coding	meiosis regulator and mRNA stability 1
chr16	13969180	13970427	-	13969180	13969890	A5SS	0.5	50	50	ENSMUST00000090300.6	ENSMUSG00000060657.9	Marf1	chr16	protein_coding	meiosis regulator and mRNA stability 1
chr16	13988355	14001340	+	13988355;13993303	13993155;14001340	ES	0.5	50	50	ENSMUST00000023359.13	ENSMUSG00000022678.17	Nde1	chr16	protein_coding	nudE neurodevelopment protein 1
chr16	14008096	14009454	+	14008096	14009582	A3SS	0.33	50	50	ENSMUST00000023359.13	ENSMUSG00000022678.17	Nde1	chr16	protein_coding	nudE neurodevelopment protein 1
chr16	14008096	14010206	+	14008096	14009582	A3SS	0.33	50	50	ENSMUST00000023359.13	ENSMUSG00000022678.17	Nde1	chr16	protein_coding	nudE neurodevelopment protein 1
chr16	14008096	14009454	+	14008096	14010206	A3SS	0.33	50	50	ENSMUST00000117958.8	ENSMUSG00000022678.17	Nde1	chr16	protein_coding	nudE neurodevelopment protein 1
chr16	13987439	14006177	+	13987439	13988202	3pMXE	0.5	50	50	ENSMUST00000133249.8	ENSMUSG00000022678.17	Nde1	chr16	protein_coding	nudE neurodevelopment protein 1
chr16	14003737	14006177	+	13987439	14006177	A5SS	0.5	50	50	ENSMUST00000127801.2	ENSMUSG00000022678.17	Nde1	chr16	protein_coding	nudE neurodevelopment protein 1
chr16	13988355	14001340	+	13993303	14001340	5pMXE	0.5	50	50	ENSMUST00000156041.2	ENSMUSG00000022678.17	Nde1	chr16	protein_coding	nudE neurodevelopment protein 1
chr16	14013048;14015952	14015914;14018559	-	14013048	14018559	cassetteExon	0.5	100	100	ENSMUST00000090287.5	ENSMUSG00000018830.11	Myh11	chr16	protein_coding	myosin, heavy polypeptide 11, smooth muscle
chr16	14064683;14066464	14066444;14068386	-	14064683	14068386	cassetteExon	0.5	100	100	ENSMUST00000090287.5	ENSMUSG00000018830.11	Myh11	chr16	protein_coding	myosin, heavy polypeptide 11, smooth muscle
chr16	14122451	14128911	-	14122428	14128911	A3SS	0.5	50	50	ENSMUST00000120707.2	ENSMUSG00000022677.16	Cep20	chr16	protein_coding	centrosomal protein 20
chr16	14122451	14135158	-	14131877	14135158	A3SS&ES	0.33	50	50	ENSMUST00000120707.2	ENSMUSG00000022677.16	Cep20	chr16	protein_coding	centrosomal protein 20
chr16	14118073	14135158	-	14118073;14122451	14122318;14135158	ES	0.33	50	50	ENSMUST00000230495.2	ENSMUSG00000022677.16	Cep20	chr16	protein_coding	centrosomal protein 20
chr16	14122451	14128911	-	14122451	14135158	A5SS	0.5	50	50	ENSMUST00000230495.2	ENSMUSG00000022677.16	Cep20	chr16	protein_coding	centrosomal protein 20
chr16	14131877	14135158	-	14118073	14135158	A3SS	0.33	50	50	ENSMUST00000148278.2	ENSMUSG00000022677.16	Cep20	chr16	protein_coding	centrosomal protein 20
chr16	14211954	14221854	+	14211954;14214340	14214215;14221854	ES	0.5	50	50	ENSMUST00000133454.8	ENSMUSG00000023088.18	Abcc1	chr16	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 1
chr16	14207847;14208186	14208148;14209182	+	14207847	14209182	cassetteExon	0.5	100	100	ENSMUST00000133454.8	ENSMUSG00000023088.18	Abcc1	chr16	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 1
chr16	14257923;14261338	14261212;14263157	+	14257923	14263157	cassetteExon	0.5	100	100	ENSMUST00000133454.8	ENSMUSG00000023088.18	Abcc1	chr16	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 1
chr16	14211954	14212059	+	14211954	14214215	A3SS	0.33	50	50	ENSMUST00000133454.8	ENSMUSG00000023088.18	Abcc1	chr16	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 1
chr16	14275833	14276888	+	14275833	14276861	A3SS	0.5	50	50	ENSMUST00000133454.8	ENSMUSG00000023088.18	Abcc1	chr16	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 1
chr16	14183712	14207671	+	14179507	14207671	A5SS	0.5	50	50	ENSMUST00000133454.8	ENSMUSG00000023088.18	Abcc1	chr16	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 1
chr16	14255597	14257851	+	14255601	14257851	A5SS	0.5	50	50	ENSMUST00000133454.8	ENSMUSG00000023088.18	Abcc1	chr16	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 1
chr16	14266447	14275752	+	14266456	14275752	A5SS	0.5	50	50	ENSMUST00000133454.8	ENSMUSG00000023088.18	Abcc1	chr16	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 1
chr16	14211954	14221854	+	14211954	14214215	3pMXE	0.33	50	50	ENSMUST00000154748.8	ENSMUSG00000023088.18	Abcc1	chr16	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 1
chr16	14211954	14212059	+	14211954	14221854	A3SS	0.33	50	50	ENSMUST00000134776.8	ENSMUSG00000023088.18	Abcc1	chr16	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 1
chr16	14400480	14407052	+	14400480;14402295	14401838;14407052	ES	0.5	50	50	ENSMUST00000129643.9	ENSMUSG00000075395.12	A630010A05Rik	chr16	protein_coding	RIKEN cDNA A630010A05 gene
chr16	14398407	14400408	+	14381337	14400408	A5SS	0.5	50	50	ENSMUST00000129643.9	ENSMUSG00000075395.12	A630010A05Rik	chr16	protein_coding	RIKEN cDNA A630010A05 gene
chr16	14738749	14774242	+	14738749	14755155	3pMXE	0.33	50	50	ENSMUST00000229825.2	ENSMUSG00000068617.6	Efcab1	chr16	protein_coding	EF-hand calcium binding domain 1
chr16	14735611	14738159	+	14735611	14738206	A3SS	0.5	50	50	ENSMUST00000229825.2	ENSMUSG00000068617.6	Efcab1	chr16	protein_coding	EF-hand calcium binding domain 1
chr16	14738310	14738588	+	14738310	14738645	A3SS	0.5	50	50	ENSMUST00000229825.2	ENSMUSG00000068617.6	Efcab1	chr16	protein_coding	EF-hand calcium binding domain 1
chr16	14738749	14741947	+	14738749	14755155	A3SS	0.33	50	50	ENSMUST00000229825.2	ENSMUSG00000068617.6	Efcab1	chr16	protein_coding	EF-hand calcium binding domain 1
chr16	14738749	14774242	+	14738749	14741947	3pMXE	0.33	50	50	ENSMUST00000228998.2	ENSMUSG00000068617.6	Efcab1	chr16	protein_coding	EF-hand calcium binding domain 1
chr16	15374407	15398923	-	15374407;15395004	15394879;15398923	ES	0.5	50	50	ENSMUST00000229859.2	ENSMUSG00000022674.16	Ube2v2	chr16	protein_coding	ubiquitin-conjugating enzyme E2 variant 2
chr16	15399071	15411555	-	15399071	15413314	A5SS	0.33	50	50	ENSMUST00000229859.2	ENSMUSG00000022674.16	Ube2v2	chr16	protein_coding	ubiquitin-conjugating enzyme E2 variant 2
chr16	15399071	15412324	-	15399071	15413314	A5SS	0.33	50	50	ENSMUST00000229859.2	ENSMUSG00000022674.16	Ube2v2	chr16	protein_coding	ubiquitin-conjugating enzyme E2 variant 2
chr16	15399071;15411622	15411555;15412324	-	15399071	15412324	cassetteExon	0.5	100	100	ENSMUST00000115777.10	ENSMUSG00000022674.16	Ube2v2	chr16	protein_coding	ubiquitin-conjugating enzyme E2 variant 2
chr16	15452441	15453094	-	15452441;15453008	15452913;15453094	ES	0.5	50	50	ENSMUST00000023353.4	ENSMUSG00000022673.6	Mcm4	chr16	protein_coding	minichromosome maintenance complex component 4
chr16	15493230	15494768	+	15493241	15494768	A5SS	0.5	50	50	ENSMUST00000182134.2	ENSMUSG00000022672.9	Prkdc	chr16	protein_coding	protein kinase, DNA activated, catalytic polypeptide
chr16	15666593;15678634	15678562;15680262	-	15666593	15680262	cassetteExon	0.5	100	100	ENSMUST00000023351.11	ENSMUSG00000022671.14	Mzt2	chr16	protein_coding	mitotic spindle organizing protein 2
chr16	16122567	16124327	+	16122567	16124362	A3SS	0.5	50	50	ENSMUST00000159962.8	ENSMUSG00000022792.17	Yars2	chr16	protein_coding	tyrosyl-tRNA synthetase 2 (mitochondrial)
chr16	16121498	16122400	+	16121611	16122400	A5SS	0.5	50	50	ENSMUST00000159962.8	ENSMUSG00000022792.17	Yars2	chr16	protein_coding	tyrosyl-tRNA synthetase 2 (mitochondrial)
chr16	16124463	16125074	+	16124482	16125074	A5SS	0.5	50	50	ENSMUST00000159962.8	ENSMUSG00000022792.17	Yars2	chr16	protein_coding	tyrosyl-tRNA synthetase 2 (mitochondrial)
chr16	16158931	16163862	-	16158931;16159332	16159286;16163862	ES	0.33	50	50	ENSMUST00000023477.15	ENSMUSG00000022789.16	Dnm1l	chr16	protein_coding	dynamin 1-like
chr16	16134642;16136341	16136309;16137316	-	16134642	16137316	cassetteExon	0.5	100	100	ENSMUST00000023477.15	ENSMUSG00000022789.16	Dnm1l	chr16	protein_coding	dynamin 1-like
chr16	16134642;16136705	16136309;16137316	-	16134642	16137316	cassetteExon	0.5	100	100	ENSMUST00000023477.15	ENSMUSG00000022789.16	Dnm1l	chr16	protein_coding	dynamin 1-like
chr16	16159332;16160599	16160561;16163862	-	16159332	16163862	cassetteExon	0.5	100	100	ENSMUST00000023477.15	ENSMUSG00000022789.16	Dnm1l	chr16	protein_coding	dynamin 1-like
chr16	16159332	16163844	-	16159332	16163862	A5SS	0.33	50	50	ENSMUST00000023477.15	ENSMUSG00000022789.16	Dnm1l	chr16	protein_coding	dynamin 1-like
chr16	16164009	16176363	-	16164009	16176628	A5SS	0.5	50	50	ENSMUST00000023477.15	ENSMUSG00000022789.16	Dnm1l	chr16	protein_coding	dynamin 1-like
chr16	16159332	16163844	-	16159332	16160561	A5SS&ES	0.33	50	50	ENSMUST00000096229.11	ENSMUSG00000022789.16	Dnm1l	chr16	protein_coding	dynamin 1-like
chr16	16136341	16137316	-	16136341;16136705	16136628;16137316	ES	0.33	50	50	ENSMUST00000115749.3	ENSMUSG00000022789.16	Dnm1l	chr16	protein_coding	dynamin 1-like
chr16	16160599	16163862	-	16158931	16163862	A3SS	0.33	50	50	ENSMUST00000230022.2	ENSMUSG00000022789.16	Dnm1l	chr16	protein_coding	dynamin 1-like
chr16	16158931	16163862	-	16158931	16159286	A5SS&ES	0.5	50	50	ENSMUST00000230980.2	ENSMUSG00000022789.16	Dnm1l	chr16	protein_coding	dynamin 1-like
chr16	16322080	16417642	-	16322080	16377901	5pMXE	0.16	50	50	ENSMUST00000161861.8	ENSMUSG00000022788.17	Fgd4	chr16	protein_coding	FYVE, RhoGEF and PH domain containing 4
chr16	16322080	16418096	-	16322080	16377901	5pMXE	0.16	50	50	ENSMUST00000161861.8	ENSMUSG00000022788.17	Fgd4	chr16	protein_coding	FYVE, RhoGEF and PH domain containing 4
chr16	16322080	16418316	-	16322080	16377901	5pMXE	0.16	50	50	ENSMUST00000161861.8	ENSMUSG00000022788.17	Fgd4	chr16	protein_coding	FYVE, RhoGEF and PH domain containing 4
chr16	16302461	16321850	-	16302461	16308287	A5SS&ES	0.5	50	50	ENSMUST00000161861.8	ENSMUSG00000022788.17	Fgd4	chr16	protein_coding	FYVE, RhoGEF and PH domain containing 4
chr16	16308470	16321850	-	16308470	16321961	A5SS	0.5	50	50	ENSMUST00000161861.8	ENSMUSG00000022788.17	Fgd4	chr16	protein_coding	FYVE, RhoGEF and PH domain containing 4
chr16	16322080	16345113	-	16322080	16377901	A5SS	0.16	50	50	ENSMUST00000161861.8	ENSMUSG00000022788.17	Fgd4	chr16	protein_coding	FYVE, RhoGEF and PH domain containing 4
chr16	16322080	16377809	-	16322080	16377901	A5SS	0.16	50	50	ENSMUST00000161861.8	ENSMUSG00000022788.17	Fgd4	chr16	protein_coding	FYVE, RhoGEF and PH domain containing 4
chr16	16322080	16418096	-	16322080	16417642	5pMXE	0.16	50	50	ENSMUST00000162671.8	ENSMUSG00000022788.17	Fgd4	chr16	protein_coding	FYVE, RhoGEF and PH domain containing 4
chr16	16322080	16418316	-	16322080	16417642	5pMXE	0.16	50	50	ENSMUST00000162671.8	ENSMUSG00000022788.17	Fgd4	chr16	protein_coding	FYVE, RhoGEF and PH domain containing 4
chr16	16322080	16345113	-	16322080	16417642	A5SS	0.16	50	50	ENSMUST00000162671.8	ENSMUSG00000022788.17	Fgd4	chr16	protein_coding	FYVE, RhoGEF and PH domain containing 4
chr16	16322080	16377809	-	16322080	16417642	A5SS	0.16	50	50	ENSMUST00000162671.8	ENSMUSG00000022788.17	Fgd4	chr16	protein_coding	FYVE, RhoGEF and PH domain containing 4
chr16	16322080	16377809	-	16322080	16345113	5pMXE	0.16	50	50	ENSMUST00000069284.14	ENSMUSG00000022788.17	Fgd4	chr16	protein_coding	FYVE, RhoGEF and PH domain containing 4
chr16	16322080	16418096	-	16322080	16345113	5pMXE	0.16	50	50	ENSMUST00000069284.14	ENSMUSG00000022788.17	Fgd4	chr16	protein_coding	FYVE, RhoGEF and PH domain containing 4
chr16	16322080	16418316	-	16322080	16345113	5pMXE	0.16	50	50	ENSMUST00000069284.14	ENSMUSG00000022788.17	Fgd4	chr16	protein_coding	FYVE, RhoGEF and PH domain containing 4
chr16	16302461;16308470	16308287;16321850	-	16302461	16321850	cassetteExon	0.5	100	100	ENSMUST00000162124.8	ENSMUSG00000022788.17	Fgd4	chr16	protein_coding	FYVE, RhoGEF and PH domain containing 4
chr16	16322080	16377809	-	16322080	16418316	A5SS	0.16	50	50	ENSMUST00000159542.8	ENSMUSG00000022788.17	Fgd4	chr16	protein_coding	FYVE, RhoGEF and PH domain containing 4
chr16	16322080	16418096	-	16322080	16418316	A5SS	0.16	50	50	ENSMUST00000159542.8	ENSMUSG00000022788.17	Fgd4	chr16	protein_coding	FYVE, RhoGEF and PH domain containing 4
chr16	16322080	16418096	-	16322080	16377809	5pMXE	0.16	50	50	ENSMUST00000159058.8	ENSMUSG00000022788.17	Fgd4	chr16	protein_coding	FYVE, RhoGEF and PH domain containing 4
chr16	16639265	16646884	-	16610527	16646884	A3SS	0.33	50	50	ENSMUST00000023468.6	ENSMUSG00000022783.12	Spag6l	chr16	protein_coding	sperm associated antigen 6-like
chr16	16643491	16646884	-	16610527	16646884	A3SS	0.33	50	50	ENSMUST00000023468.6	ENSMUSG00000022783.12	Spag6l	chr16	protein_coding	sperm associated antigen 6-like
chr16	16647007	16647059	-	16646979	16647059	A3SS	0.5	50	50	ENSMUST00000023468.6	ENSMUSG00000022783.12	Spag6l	chr16	protein_coding	sperm associated antigen 6-like
chr16	16643491	16646884	-	16639265	16646884	A3SS	0.33	50	50	ENSMUST00000132033.8	ENSMUSG00000022783.12	Spag6l	chr16	protein_coding	sperm associated antigen 6-like
chr16	16686842	16687137	-	16686842	16686930	5pMXE	0.33	50	50	ENSMUST00000075017.5	ENSMUSG00000059305.13	Vpreb1	chr16	protein_coding	pre-B lymphocyte gene 1
chr16	16686842	16688552	-	16686842	16686930	5pMXE	0.33	50	50	ENSMUST00000075017.5	ENSMUSG00000059305.13	Vpreb1	chr16	protein_coding	pre-B lymphocyte gene 1
chr16	16686842;16687326	16686930;16688552	-	16686842	16688552	cassetteExon	0.5	100	100	ENSMUST00000232670.2	ENSMUSG00000059305.13	Vpreb1	chr16	protein_coding	pre-B lymphocyte gene 1
chr16	16686842;16687326	16687137;16688552	-	16686842	16688552	cassetteExon	0.5	100	100	ENSMUST00000232670.2	ENSMUSG00000059305.13	Vpreb1	chr16	protein_coding	pre-B lymphocyte gene 1
chr16	16688693;16693019	16692933;16695696	+	16688693	16695696	cassetteExon	0.5	100	100	ENSMUST00000232080.2	ENSMUSG00000022779.17	Top3b	chr16	protein_coding	topoisomerase (DNA) III beta
chr16	16688693;16693019	16692936;16695696	+	16688693	16695696	cassetteExon	0.5	100	100	ENSMUST00000232080.2	ENSMUSG00000022779.17	Top3b	chr16	protein_coding	topoisomerase (DNA) III beta
chr16	16688762	16695696	+	16688693	16695696	A5SS	0.25	50	50	ENSMUST00000232080.2	ENSMUSG00000022779.17	Top3b	chr16	protein_coding	topoisomerase (DNA) III beta
chr16	16688919	16695696	+	16688693	16695696	A5SS	0.25	50	50	ENSMUST00000232080.2	ENSMUSG00000022779.17	Top3b	chr16	protein_coding	topoisomerase (DNA) III beta
chr16	16709420;16710015	16709980;16710279	+	16709420	16710279	cassetteExon	0.5	100	100	ENSMUST00000232581.2	ENSMUSG00000022779.17	Top3b	chr16	protein_coding	topoisomerase (DNA) III beta
chr16	16688693	16692933	+	16688693	16692936	A3SS	0.33	50	50	ENSMUST00000232581.2	ENSMUSG00000022779.17	Top3b	chr16	protein_coding	topoisomerase (DNA) III beta
chr16	16705587	16705722	+	16705587	16705696	A3SS	0.5	50	50	ENSMUST00000232581.2	ENSMUSG00000022779.17	Top3b	chr16	protein_coding	topoisomerase (DNA) III beta
chr16	16688762	16695696	+	16693019	16695696	A5SS&ES	0.25	50	50	ENSMUST00000232581.2	ENSMUSG00000022779.17	Top3b	chr16	protein_coding	topoisomerase (DNA) III beta
chr16	16688919	16692936	+	16688693	16692936	A5SS	0.5	50	50	ENSMUST00000232581.2	ENSMUSG00000022779.17	Top3b	chr16	protein_coding	topoisomerase (DNA) III beta
chr16	16688919	16695696	+	16693019	16695696	A5SS&ES	0.25	50	50	ENSMUST00000232581.2	ENSMUSG00000022779.17	Top3b	chr16	protein_coding	topoisomerase (DNA) III beta
chr16	16688762;16693019	16692933;16695696	+	16688762	16695696	cassetteExon	0.5	100	100	ENSMUST00000231812.2	ENSMUSG00000022779.17	Top3b	chr16	protein_coding	topoisomerase (DNA) III beta
chr16	16688919	16695696	+	16688762	16695696	A5SS	0.25	50	50	ENSMUST00000231812.2	ENSMUSG00000022779.17	Top3b	chr16	protein_coding	topoisomerase (DNA) III beta
chr16	16688762	16692933	+	16688693	16692933	A5SS	0.33	50	50	ENSMUST00000232017.2	ENSMUSG00000022779.17	Top3b	chr16	protein_coding	topoisomerase (DNA) III beta
chr16	16688919	16692933	+	16688693	16692933	A5SS	0.33	50	50	ENSMUST00000232017.2	ENSMUSG00000022779.17	Top3b	chr16	protein_coding	topoisomerase (DNA) III beta
chr16	16688919;16693019	16692933;16695696	+	16688919	16695696	cassetteExon	0.5	100	100	ENSMUST00000023465.16	ENSMUSG00000022779.17	Top3b	chr16	protein_coding	topoisomerase (DNA) III beta
chr16	16688919;16693019	16692936;16695696	+	16688919	16695696	cassetteExon	0.5	100	100	ENSMUST00000023465.16	ENSMUSG00000022779.17	Top3b	chr16	protein_coding	topoisomerase (DNA) III beta
chr16	16688919	16692933	+	16688919	16692936	A3SS	0.33	50	50	ENSMUST00000232231.2	ENSMUSG00000022779.17	Top3b	chr16	protein_coding	topoisomerase (DNA) III beta
chr16	16688693	16695696	+	16693019	16695696	A5SS&ES	0.25	50	50	ENSMUST00000232231.2	ENSMUSG00000022779.17	Top3b	chr16	protein_coding	topoisomerase (DNA) III beta
chr16	16688919	16692933	+	16688762	16692933	A5SS	0.33	50	50	ENSMUST00000232200.2	ENSMUSG00000022779.17	Top3b	chr16	protein_coding	topoisomerase (DNA) III beta
chr16	16709420	16710279	+	16709420	16709980	A3SS	0.5	50	50	ENSMUST00000231402.2	ENSMUSG00000022779.17	Top3b	chr16	protein_coding	topoisomerase (DNA) III beta
chr16	16714488	16728803	+	16714488;16721455	16721188;16728803	ES	0.5	50	50	ENSMUST00000027373.12	ENSMUSG00000026181.14	Ppm1f	chr16	protein_coding	protein phosphatase 1F (PP2C domain containing)
chr16	16844004	16853306	+	16844004;16844353	16844222;16853306	ES	0.5	50	50	ENSMUST00000232611.2	ENSMUSG00000063358.18	Mapk1	chr16	protein_coding	mitogen-activated protein kinase 1
chr16	16853415;16853587	16853534;16856178	+	16853415	16856178	cassetteExon	0.5	100	100	ENSMUST00000232611.2	ENSMUSG00000063358.18	Mapk1	chr16	protein_coding	mitogen-activated protein kinase 1
chr16	16853515	16856178	+	16853415	16856178	A5SS	0.33	50	50	ENSMUST00000232611.2	ENSMUSG00000063358.18	Mapk1	chr16	protein_coding	mitogen-activated protein kinase 1
chr16	16856303	16861550	+	16856298	16861550	A5SS	0.5	50	50	ENSMUST00000232611.2	ENSMUSG00000063358.18	Mapk1	chr16	protein_coding	mitogen-activated protein kinase 1
chr16	16844004	16853306	+	16844004	16844222	3pMXE	0.5	50	50	ENSMUST00000232281.2	ENSMUSG00000063358.18	Mapk1	chr16	protein_coding	mitogen-activated protein kinase 1
chr16	16844004	16853306	+	16844353	16853306	5pMXE	0.5	50	50	ENSMUST00000232067.2	ENSMUSG00000063358.18	Mapk1	chr16	protein_coding	mitogen-activated protein kinase 1
chr16	16853515	16856178	+	16853587	16856178	A5SS&ES	0.33	50	50	ENSMUST00000232067.2	ENSMUSG00000063358.18	Mapk1	chr16	protein_coding	mitogen-activated protein kinase 1
chr16	16888227	16899462	+	16888227;16895918	16895639;16899462	ES	0.5	50	50	ENSMUST00000035682.16	ENSMUSG00000022773.20	Ypel1	chr16	protein_coding	yippee like 1
chr16	16888227;16892616	16892491;16895639	+	16888227	16895639	cassetteExon	0.5	100	100	ENSMUST00000035682.16	ENSMUSG00000022773.20	Ypel1	chr16	protein_coding	yippee like 1
chr16	16888227;16895266	16895057;16895639	+	16888227	16895639	cassetteExon	0.5	100	100	ENSMUST00000035682.16	ENSMUSG00000022773.20	Ypel1	chr16	protein_coding	yippee like 1
chr16	16900040	16900421	+	16900040	16902380	A3SS	0.5	50	50	ENSMUST00000035682.16	ENSMUSG00000022773.20	Ypel1	chr16	protein_coding	yippee like 1
chr16	16888227	16892491	+	16888227	16899462	A3SS	0.25	50	50	ENSMUST00000231518.2	ENSMUSG00000022773.20	Ypel1	chr16	protein_coding	yippee like 1
chr16	16888227	16895057	+	16888227	16899462	A3SS	0.25	50	50	ENSMUST00000231518.2	ENSMUSG00000022773.20	Ypel1	chr16	protein_coding	yippee like 1
chr16	16888227;16895266	16895057;16895639	+	16888227;16892616	16892491;16895639	MXE	0.5	100	100	ENSMUST00000232168.2	ENSMUSG00000022773.20	Ypel1	chr16	protein_coding	yippee like 1
chr16	16888227	16899462	+	16895918	16899462	5pMXE	0.5	50	50	ENSMUST00000239090.2	ENSMUSG00000022773.20	Ypel1	chr16	protein_coding	yippee like 1
chr16	16910950	16913869	-	16910950;16912907	16912747;16913869	ES	0.5	50	50	ENSMUST00000023455.14	ENSMUSG00000022771.18	Ppil2	chr16	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 2
chr16	16925088	16929007	-	16925088;16927558	16927509;16929007	ES	0.25	50	50	ENSMUST00000023455.14	ENSMUSG00000022771.18	Ppil2	chr16	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 2
chr16	16914658;16914851	16914760;16915220	-	16914658	16915220	cassetteExon	0.5	100	100	ENSMUST00000023455.14	ENSMUSG00000022771.18	Ppil2	chr16	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 2
chr16	16927558;16928067	16927826;16929007	-	16927558	16929007	cassetteExon	0.5	100	100	ENSMUST00000023455.14	ENSMUSG00000022771.18	Ppil2	chr16	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 2
chr16	16904979	16906609	-	16905077	16906609	A3SS	0.5	50	50	ENSMUST00000023455.14	ENSMUSG00000022771.18	Ppil2	chr16	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 2
chr16	16908022	16909732	-	16908022	16909039	A5SS&ES	0.5	50	50	ENSMUST00000023455.14	ENSMUSG00000022771.18	Ppil2	chr16	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 2
chr16	16910655	16910875	-	16909753	16910875	A3SS	0.5	50	50	ENSMUST00000231451.2	ENSMUSG00000022771.18	Ppil2	chr16	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 2
chr16	16909753	16910079	-	16909753	16910875	A5SS	0.5	50	50	ENSMUST00000231451.2	ENSMUSG00000022771.18	Ppil2	chr16	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 2
chr16	16925088	16929007	-	16918171	16929007	A3SS	0.25	50	50	ENSMUST00000232481.2	ENSMUSG00000022771.18	Ppil2	chr16	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 2
chr16	16927558	16929007	-	16918171	16929007	A3SS	0.25	50	50	ENSMUST00000232481.2	ENSMUSG00000022771.18	Ppil2	chr16	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 2
chr16	16928067	16929007	-	16918171	16929007	A3SS	0.25	50	50	ENSMUST00000232481.2	ENSMUSG00000022771.18	Ppil2	chr16	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 2
chr16	16918171	16921440	-	16918171	16929007	A5SS	0.5	50	50	ENSMUST00000232481.2	ENSMUSG00000022771.18	Ppil2	chr16	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 2
chr16	16910950	16913869	-	16912907	16913869	3pMXE	0.5	50	50	ENSMUST00000231287.2	ENSMUSG00000022771.18	Ppil2	chr16	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 2
chr16	16914658	16915220	-	16914658	16914760	5pMXE	0.5	50	50	ENSMUST00000231287.2	ENSMUSG00000022771.18	Ppil2	chr16	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 2
chr16	16928067	16929007	-	16925088	16929007	A3SS	0.25	50	50	ENSMUST00000231635.2	ENSMUSG00000022771.18	Ppil2	chr16	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 2
chr16	16925088	16929007	-	16927558	16929007	3pMXE	0.25	50	50	ENSMUST00000231536.2	ENSMUSG00000022771.18	Ppil2	chr16	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 2
chr16	16939415	16942854	-	16939415;16941518	16941376;16942854	ES	0.5	50	50	ENSMUST00000093336.8	ENSMUSG00000049916.13	2610318N02Rik	chr16	protein_coding	RIKEN cDNA 2610318N02 gene
chr16	16939415	16939528	-	16939415	16941376	A5SS	0.33	50	50	ENSMUST00000093336.8	ENSMUSG00000049916.13	2610318N02Rik	chr16	protein_coding	RIKEN cDNA 2610318N02 gene
chr16	16939415	16939528	-	16939415	16942854	A5SS	0.33	50	50	ENSMUST00000231681.2	ENSMUSG00000049916.13	2610318N02Rik	chr16	protein_coding	RIKEN cDNA 2610318N02 gene
chr16	16962012	16964710	-	16962012	16962241	5pMXE	0.33	50	50	ENSMUST00000232540.2	ENSMUSG00000022768.18	Ccdc116	chr16	protein_coding	coiled-coil domain containing 116
chr16	16962012	16962233	-	16962012	16962241	A5SS	0.33	50	50	ENSMUST00000232540.2	ENSMUSG00000022768.18	Ccdc116	chr16	protein_coding	coiled-coil domain containing 116
chr16	16962012	16962233	-	16962012	16964710	A5SS	0.33	50	50	ENSMUST00000023452.16	ENSMUSG00000022768.18	Ccdc116	chr16	protein_coding	coiled-coil domain containing 116
chr16	16965561	16968665	+	16965561;16965838	16965661;16968665	ES	0.5	50	50	ENSMUST00000231726.2	ENSMUSG00000041774.17	Ydjc	chr16	protein_coding	YdjC homolog (bacterial)
chr16	16965838	16966020	+	16965838	16968665	A3SS	0.5	50	50	ENSMUST00000231726.2	ENSMUSG00000041774.17	Ydjc	chr16	protein_coding	YdjC homolog (bacterial)
chr16	16965315	16965462	+	16965256	16965462	A5SS	0.33	50	50	ENSMUST00000231726.2	ENSMUSG00000041774.17	Ydjc	chr16	protein_coding	YdjC homolog (bacterial)
chr16	16965352	16965462	+	16965256	16965462	A5SS	0.33	50	50	ENSMUST00000231726.2	ENSMUSG00000041774.17	Ydjc	chr16	protein_coding	YdjC homolog (bacterial)
chr16	16965561	16968665	+	16965561	16965661	3pMXE	0.5	50	50	ENSMUST00000231493.2	ENSMUSG00000041774.17	Ydjc	chr16	protein_coding	YdjC homolog (bacterial)
chr16	16965352	16965462	+	16965315	16965462	A5SS	0.33	50	50	ENSMUST00000231493.2	ENSMUSG00000041774.17	Ydjc	chr16	protein_coding	YdjC homolog (bacterial)
chr16	16972146	16994276	-	16972146;16978040	16977854;16994276	ES	0.33	50	50	ENSMUST00000232139.2	ENSMUSG00000038965.18	Ube2l3	chr16	protein_coding	ubiquitin-conjugating enzyme E2L 3
chr16	16978040	17019299	-	16978040;16994371	16994276;17019299	ES	0.5	50	50	ENSMUST00000232139.2	ENSMUSG00000038965.18	Ube2l3	chr16	protein_coding	ubiquitin-conjugating enzyme E2L 3
chr16	16978040;16989725	16989627;16994276	-	16978040	16994276	cassetteExon	0.5	100	100	ENSMUST00000232139.2	ENSMUSG00000038965.18	Ube2l3	chr16	protein_coding	ubiquitin-conjugating enzyme E2L 3
chr16	16978040	16991077	-	16978040	16994276	A5SS	0.25	50	50	ENSMUST00000232139.2	ENSMUSG00000038965.18	Ube2l3	chr16	protein_coding	ubiquitin-conjugating enzyme E2L 3
chr16	16972146;16994371	16994276;17019299	-	16972146;16978040	16977854;17019299	MXE	0.5	100	100	ENSMUST00000231643.2	ENSMUSG00000038965.18	Ube2l3	chr16	protein_coding	ubiquitin-conjugating enzyme E2L 3
chr16	16978040	16989627	-	16978040	17019299	A5SS	0.25	50	50	ENSMUST00000231643.2	ENSMUSG00000038965.18	Ube2l3	chr16	protein_coding	ubiquitin-conjugating enzyme E2L 3
chr16	16978040	16991077	-	16978040	17019299	A5SS	0.25	50	50	ENSMUST00000231643.2	ENSMUSG00000038965.18	Ube2l3	chr16	protein_coding	ubiquitin-conjugating enzyme E2L 3
chr16	16989725	16994276	-	16972146	16994276	A3SS	0.33	50	50	ENSMUST00000232594.2	ENSMUSG00000038965.18	Ube2l3	chr16	protein_coding	ubiquitin-conjugating enzyme E2L 3
chr16	16978040	16991077	-	16978040	16989627	A5SS&ES	0.33	50	50	ENSMUST00000232514.2	ENSMUSG00000038965.18	Ube2l3	chr16	protein_coding	ubiquitin-conjugating enzyme E2L 3
chr16	16972146	16994276	-	16978040	16994276	3pMXE	0.33	50	50	ENSMUST00000232035.2	ENSMUSG00000038965.18	Ube2l3	chr16	protein_coding	ubiquitin-conjugating enzyme E2L 3
chr16	17072930	17093930	+	17072930	17075199	3pMXE	0.5	50	50	ENSMUST00000090190.14	ENSMUSG00000050240.17	Hic2	chr16	protein_coding	hypermethylated in cancer 2
chr16	17094751	17095058	+	17094751;17094903	17094826;17095058	ES	0.5	50	50	ENSMUST00000164950.11	ENSMUSG00000055692.22	Tmem191c	chr16	protein_coding	transmembrane protein 191C
chr16	17095755	17099633	+	17095755	17095836	3pMXE	0.33	50	50	ENSMUST00000164950.11	ENSMUSG00000055692.22	Tmem191c	chr16	protein_coding	transmembrane protein 191C
chr16	17095755	17100679	+	17095755	17095836	3pMXE	0.33	50	50	ENSMUST00000164950.11	ENSMUSG00000055692.22	Tmem191c	chr16	protein_coding	transmembrane protein 191C
chr16	17094751	17095058	+	17094903	17095058	A5SS	0.5	50	50	ENSMUST00000232220.2	ENSMUSG00000055692.22	Tmem191c	chr16	protein_coding	transmembrane protein 191C
chr16	17094751	17095058	+	17094751	17094826	A3SS	0.5	50	50	ENSMUST00000231646.2	ENSMUSG00000055692.22	Tmem191c	chr16	protein_coding	transmembrane protein 191C
chr16	17095755	17099633	+	17095755	17100679	A3SS	0.33	50	50	ENSMUST00000232167.2	ENSMUSG00000055692.22	Tmem191c	chr16	protein_coding	transmembrane protein 191C
chr16	17117433;17118495	17118355;17118857	-	17117433	17118857	cassetteExon	0.5	100	100	ENSMUST00000036161.12	ENSMUSG00000041720.15	Pi4ka	chr16	protein_coding	phosphatidylinositol 4-kinase alpha
chr16	17136268	17140901	-	17136268	17136347	A5SS&ES	0.5	50	50	ENSMUST00000036161.12	ENSMUSG00000041720.15	Pi4ka	chr16	protein_coding	phosphatidylinositol 4-kinase alpha
chr16	17136417	17140901	-	17136417	17140852	A5SS	0.5	50	50	ENSMUST00000036161.12	ENSMUSG00000041720.15	Pi4ka	chr16	protein_coding	phosphatidylinositol 4-kinase alpha
chr16	17207321	17223498	-	17207321	17224119	A5SS	0.5	50	50	ENSMUST00000036161.12	ENSMUSG00000041720.15	Pi4ka	chr16	protein_coding	phosphatidylinositol 4-kinase alpha
chr16	17136268	17140901	-	17136268;17136417	17136347;17140901	ES	0.5	50	50	ENSMUST00000231651.2	ENSMUSG00000041720.15	Pi4ka	chr16	protein_coding	phosphatidylinositol 4-kinase alpha
chr16	17149311	17154156	+	17149311	17154029	A3SS	0.5	50	50	ENSMUST00000023450.15	ENSMUSG00000022766.15	Serpind1	chr16	protein_coding	serine (or cysteine) peptidase inhibitor, clade D, member 1
chr16	17270652	17301525	+	17270652;17287222	17286757;17301525	ES	0.5	50	50	ENSMUST00000006293.5	ENSMUSG00000006134.5	Crkl	chr16	protein_coding	v-crk avian sarcoma virus CT10 oncogene homolog-like
chr16	17270652	17301525	+	17270652	17286757	3pMXE	0.5	50	50	ENSMUST00000231228.2	ENSMUSG00000006134.5	Crkl	chr16	protein_coding	v-crk avian sarcoma virus CT10 oncogene homolog-like
chr16	17320821	17321508	+	17320821;17321406	17321330;17321508	ES	0.5	50	50	ENSMUST00000115685.10	ENSMUSG00000022763.19	Aifm3	chr16	protein_coding	apoptosis-inducing factor, mitochondrion-associated 3
chr16	17324198	17324991	+	17324198;17324783	17324763;17324991	ES	0.5	50	50	ENSMUST00000115685.10	ENSMUSG00000022763.19	Aifm3	chr16	protein_coding	apoptosis-inducing factor, mitochondrion-associated 3
chr16	17309347	17309785	+	17307542	17309785	A5SS	0.5	50	50	ENSMUST00000115685.10	ENSMUSG00000022763.19	Aifm3	chr16	protein_coding	apoptosis-inducing factor, mitochondrion-associated 3
chr16	17321625	17322782	+	17321625	17324094	A3SS	0.5	50	50	ENSMUST00000231800.2	ENSMUSG00000022763.19	Aifm3	chr16	protein_coding	apoptosis-inducing factor, mitochondrion-associated 3
chr16	17323623	17324094	+	17321625	17324094	A5SS	0.5	50	50	ENSMUST00000231800.2	ENSMUSG00000022763.19	Aifm3	chr16	protein_coding	apoptosis-inducing factor, mitochondrion-associated 3
chr16	17327552	17333672	+	17327552;17329986	17329930;17333672	ES	0.5	50	50	ENSMUST00000023444.11	ENSMUSG00000022761.13	Lztr1	chr16	protein_coding	leucine-zipper-like transcriptional regulator, 1
chr16	17335403	17337251	+	17335403;17336438	17336381;17337251	ES	0.5	50	50	ENSMUST00000023444.11	ENSMUSG00000022761.13	Lztr1	chr16	protein_coding	leucine-zipper-like transcriptional regulator, 1
chr16	17336438	17337197	+	17336438	17337251	A3SS	0.5	50	50	ENSMUST00000023444.11	ENSMUSG00000022761.13	Lztr1	chr16	protein_coding	leucine-zipper-like transcriptional regulator, 1
chr16	17327294	17327490	+	17327082	17327490	A5SS	0.5	50	50	ENSMUST00000023444.11	ENSMUSG00000022761.13	Lztr1	chr16	protein_coding	leucine-zipper-like transcriptional regulator, 1
chr16	17328978	17329930	+	17327552	17329930	A5SS	0.5	50	50	ENSMUST00000023444.11	ENSMUSG00000022761.13	Lztr1	chr16	protein_coding	leucine-zipper-like transcriptional regulator, 1
chr16	17327552	17333672	+	17327552	17329930	3pMXE	0.5	50	50	ENSMUST00000231538.2	ENSMUSG00000022761.13	Lztr1	chr16	protein_coding	leucine-zipper-like transcriptional regulator, 1
chr16	17342086	17343287	+	17342086	17342172	3pMXE	0.5	50	50	ENSMUST00000232379.2	ENSMUSG00000022761.13	Lztr1	chr16	protein_coding	leucine-zipper-like transcriptional regulator, 1
chr16	17335403	17337251	+	17335403	17336381	A3SS&ES	0.5	50	50	ENSMUST00000231994.2	ENSMUSG00000022761.13	Lztr1	chr16	protein_coding	leucine-zipper-like transcriptional regulator, 1
chr16	17335403	17337251	+	17336438	17337251	5pMXE	0.5	50	50	ENSMUST00000231326.2	ENSMUSG00000022761.13	Lztr1	chr16	protein_coding	leucine-zipper-like transcriptional regulator, 1
chr16	17343208	17343287	+	17342086	17343287	A5SS	0.5	50	50	ENSMUST00000232438.2	ENSMUSG00000022761.13	Lztr1	chr16	protein_coding	leucine-zipper-like transcriptional regulator, 1
chr16	17346604	17348094	-	17346604;17346939	17346799;17348094	ES	0.5	50	50	ENSMUST00000100125.12	ENSMUSG00000022760.18	Thap7	chr16	protein_coding	THAP domain containing 7
chr16	17348249	17348542	-	17348249	17348642	A5SS	0.33	50	50	ENSMUST00000100125.12	ENSMUSG00000022760.18	Thap7	chr16	protein_coding	THAP domain containing 7
chr16	17348249	17348548	-	17348249	17348642	A5SS	0.33	50	50	ENSMUST00000100125.12	ENSMUSG00000022760.18	Thap7	chr16	protein_coding	THAP domain containing 7
chr16	17348721	17348842	-	17348721	17348889	A5SS	0.5	50	50	ENSMUST00000100125.12	ENSMUSG00000022760.18	Thap7	chr16	protein_coding	THAP domain containing 7
chr16	17348249	17348548	-	17348249	17348542	A5SS	0.33	50	50	ENSMUST00000232046.2	ENSMUSG00000022760.18	Thap7	chr16	protein_coding	THAP domain containing 7
chr16	17348641	17348889	-	17348721	17348889	A3SS	0.5	50	50	ENSMUST00000232114.2	ENSMUSG00000022760.18	Thap7	chr16	protein_coding	THAP domain containing 7
chr16	17346604	17348642	-	17346604	17346799	A5SS&ES	0.33	50	50	ENSMUST00000232114.2	ENSMUSG00000022760.18	Thap7	chr16	protein_coding	THAP domain containing 7
chr16	17346604;17348249	17348094;17348642	-	17346604	17348642	cassetteExon	0.5	100	100	ENSMUST00000232041.2	ENSMUSG00000022760.18	Thap7	chr16	protein_coding	THAP domain containing 7
chr16	17346604	17348642	-	17346604	17348094	5pMXE	0.33	50	50	ENSMUST00000231676.2	ENSMUSG00000022760.18	Thap7	chr16	protein_coding	THAP domain containing 7
chr16	17346604	17348094	-	17346604	17346799	5pMXE	0.33	50	50	ENSMUST00000231699.2	ENSMUSG00000022760.18	Thap7	chr16	protein_coding	THAP domain containing 7
chr16	17346604	17348094	-	17346939	17348094	3pMXE	0.5	50	50	ENSMUST00000231446.2	ENSMUSG00000022760.18	Thap7	chr16	protein_coding	THAP domain containing 7
chr16	17363506	17367642	-	17363506;17366650	17366555;17367642	ES	0.33	50	50	ENSMUST00000100123.10	ENSMUSG00000022759.16	Lrrc74b	chr16	protein_coding	leucine rich repeat containing 74B
chr16	17367259	17367642	-	17366650	17367642	A3SS	0.33	50	50	ENSMUST00000100123.10	ENSMUSG00000022759.16	Lrrc74b	chr16	protein_coding	leucine rich repeat containing 74B
chr16	17371079	17371172	-	17371079	17376033	A5SS	0.5	50	50	ENSMUST00000100123.10	ENSMUSG00000022759.16	Lrrc74b	chr16	protein_coding	leucine rich repeat containing 74B
chr16	17367259	17367642	-	17363506	17367642	A3SS	0.33	50	50	ENSMUST00000023442.13	ENSMUSG00000022759.16	Lrrc74b	chr16	protein_coding	leucine rich repeat containing 74B
chr16	17386038	17388222	+	17386038;17386234	17386125;17388222	ES	0.5	50	50	ENSMUST00000171002.10	ENSMUSG00000022758.15	P2rx6	chr16	protein_coding	purinergic receptor P2X, ligand-gated ion channel, 6
chr16	17385663;17385817	17385737;17385897	+	17385663	17385897	cassetteExon	0.5	100	100	ENSMUST00000171002.10	ENSMUSG00000022758.15	P2rx6	chr16	protein_coding	purinergic receptor P2X, ligand-gated ion channel, 6
chr16	17393829	17394790	-	17393829	17394504	5pMXE	0.25	50	50	ENSMUST00000172164.10	ENSMUSG00000022756.18	Slc7a4	chr16	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 4
chr16	17393829;17394067	17393945;17394504	-	17393829	17394504	cassetteExon	0.5	100	100	ENSMUST00000172164.10	ENSMUSG00000022756.18	Slc7a4	chr16	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 4
chr16	17393832	17394504	-	17393829	17394504	A3SS	0.33	50	50	ENSMUST00000172164.10	ENSMUSG00000022756.18	Slc7a4	chr16	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 4
chr16	17393829	17394296	-	17393829	17394504	A5SS	0.25	50	50	ENSMUST00000172164.10	ENSMUSG00000022756.18	Slc7a4	chr16	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 4
chr16	17393829	17393945	-	17393829	17394790	A5SS	0.25	50	50	ENSMUST00000063544.11	ENSMUSG00000022756.18	Slc7a4	chr16	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 4
chr16	17393829	17394296	-	17393829	17394790	A5SS	0.25	50	50	ENSMUST00000063544.11	ENSMUSG00000022756.18	Slc7a4	chr16	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 4
chr16	17393832	17397940	-	17393832	17394504	5pMXE	0.33	50	50	ENSMUST00000232385.2	ENSMUSG00000022756.18	Slc7a4	chr16	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 4
chr16	17393832;17394067	17393945;17394504	-	17393832	17394504	cassetteExon	0.5	100	100	ENSMUST00000232385.2	ENSMUSG00000022756.18	Slc7a4	chr16	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 4
chr16	17393832	17393945	-	17393829	17393945	A3SS	0.5	50	50	ENSMUST00000232226.2	ENSMUSG00000022756.18	Slc7a4	chr16	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 4
chr16	17393832	17394504	-	17394067	17394504	A3SS&ES	0.33	50	50	ENSMUST00000232226.2	ENSMUSG00000022756.18	Slc7a4	chr16	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 4
chr16	17393829	17394296	-	17393829	17393945	A5SS&ES	0.33	50	50	ENSMUST00000232226.2	ENSMUSG00000022756.18	Slc7a4	chr16	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 4
chr16	17393832	17394504	-	17393832	17393945	5pMXE	0.33	50	50	ENSMUST00000231552.2	ENSMUSG00000022756.18	Slc7a4	chr16	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 4
chr16	17393832	17397940	-	17393832	17393945	5pMXE	0.33	50	50	ENSMUST00000231552.2	ENSMUSG00000022756.18	Slc7a4	chr16	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 4
chr16	17393829	17394504	-	17394067	17394504	A3SS&ES	0.33	50	50	ENSMUST00000232336.2	ENSMUSG00000022756.18	Slc7a4	chr16	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 4
chr16	17437298	17441769	+	17437298;17439389	17439306;17441769	ES	0.5	50	50	ENSMUST00000006053.13	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17439389	17443584	+	17439389;17441855	17441769;17443584	ES	0.5	50	50	ENSMUST00000006053.13	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17441855	17443808	+	17441855;17443726	17443584;17443808	ES	0.5	50	50	ENSMUST00000006053.13	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17443726	17444294	+	17443726;17443883	17443808;17444294	ES	0.33	50	50	ENSMUST00000006053.13	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17444817	17449850	+	17444817;17447062	17446933;17449850	ES	0.33	50	50	ENSMUST00000006053.13	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17449921	17456360	+	17449921;17453432	17453346;17456360	ES	0.5	50	50	ENSMUST00000006053.13	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17459693	17460338	+	17459693;17460161	17460033;17460338	ES	0.5	50	50	ENSMUST00000006053.13	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17437298;17438626	17438450;17439306	+	17437298	17439306	cassetteExon	0.5	100	100	ENSMUST00000006053.13	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17437298;17438626	17438576;17439306	+	17437298	17439306	cassetteExon	0.5	100	100	ENSMUST00000006053.13	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17457709;17457871	17457833;17457990	+	17457709	17457990	cassetteExon	0.5	100	100	ENSMUST00000006053.13	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17441855	17443560	+	17441855	17443584	A3SS	0.16	50	50	ENSMUST00000006053.13	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17443726	17444306	+	17443726	17443808	A3SS&ES	0.33	50	50	ENSMUST00000006053.13	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17453432	17456244	+	17453432	17456360	A3SS	0.5	50	50	ENSMUST00000006053.13	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17437524	17439306	+	17437298	17439306	A5SS	0.33	50	50	ENSMUST00000006053.13	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17457706	17457990	+	17457709	17457990	A5SS	0.33	50	50	ENSMUST00000006053.13	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17441855	17443808	+	17441855;17443726	17443560;17443808	ES	0.5	50	50	ENSMUST00000231311.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17439389	17443584	+	17439389	17441769	A3SS&ES	0.5	50	50	ENSMUST00000231311.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17449921	17457138	+	17449921	17456360	3pMXE	0.33	50	50	ENSMUST00000232185.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17437298;17439389	17439306;17443584	+	17437298;17441855	17441769;17443584	MXE	0.5	100	100	ENSMUST00000232185.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17441855;17447062	17446933;17449850	+	17441855;17444817	17443584;17449850	MXE	0.5	100	100	ENSMUST00000232185.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17437298	17438450	+	17437298	17441769	A3SS	0.25	50	50	ENSMUST00000232185.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17437298	17438576	+	17437298	17441769	A3SS	0.25	50	50	ENSMUST00000232185.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17449921	17457138	+	17449921;17456505	17456360;17457138	ES	0.5	50	50	ENSMUST00000163476.10	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17437298;17441855	17441769;17443808	+	17437298;17443726	17439306;17443808	MXE	0.5	100	100	ENSMUST00000231257.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17437298;17441855	17441769;17444294	+	17437298;17443883	17439306;17444294	MXE	0.5	100	100	ENSMUST00000231257.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17439389;17441855	17441769;17443808	+	17439389;17443726	17443584;17443808	MXE	0.5	100	100	ENSMUST00000231257.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17439389;17441855	17441769;17444294	+	17439389;17443883	17443584;17444294	MXE	0.5	100	100	ENSMUST00000231257.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17457871	17457990	+	17457706	17457990	A5SS	0.33	50	50	ENSMUST00000165363.10	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17437298	17441769	+	17437298	17439306	3pMXE	0.25	50	50	ENSMUST00000231949.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17437298	17438576	+	17437298;17438494	17438450;17438576	ES	0.5	50	50	ENSMUST00000232043.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17441855	17443808	+	17441855	17443584	3pMXE	0.16	50	50	ENSMUST00000232043.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17441855	17444294	+	17441855	17443584	3pMXE	0.16	50	50	ENSMUST00000232043.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17441855	17446933	+	17441855	17443584	3pMXE	0.16	50	50	ENSMUST00000232043.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17441855	17449850	+	17441855	17443584	3pMXE	0.16	50	50	ENSMUST00000232043.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17437524	17439306	+	17438626	17439306	A5SS&ES	0.33	50	50	ENSMUST00000232043.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17441855	17444294	+	17441855;17443726	17443584;17444294	ES	0.33	50	50	ENSMUST00000232116.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17441855;17443883	17443808;17444294	+	17441855;17443726	17443584;17444294	MXE	0.5	100	100	ENSMUST00000232116.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17443726	17444306	+	17443726	17444294	A3SS	0.33	50	50	ENSMUST00000232116.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17443726	17444294	+	17443726	17443808	3pMXE	0.33	50	50	ENSMUST00000232442.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17439389	17446933	+	17439389	17441769	3pMXE	0.33	50	50	ENSMUST00000231887.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17439389;17441855	17441769;17446933	+	17439389	17446933	cassetteExon	0.5	100	100	ENSMUST00000232271.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17439389;17441855	17441769;17449850	+	17439389;17447062	17446933;17449850	MXE	0.5	100	100	ENSMUST00000232271.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17439389	17443584	+	17439389	17446933	A3SS	0.33	50	50	ENSMUST00000232271.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17449921	17453346	+	17449921	17457138	A3SS	0.33	50	50	ENSMUST00000232271.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17444817	17446933	+	17439389	17446933	A5SS	0.33	50	50	ENSMUST00000232271.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17444817	17449850	+	17447062	17449850	A5SS&ES	0.33	50	50	ENSMUST00000232271.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17437298	17441769	+	17439389	17441769	5pMXE	0.5	50	50	ENSMUST00000231722.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17441855	17449850	+	17441855;17447062	17446933;17449850	ES	0.33	50	50	ENSMUST00000231722.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17441855	17443560	+	17441855	17446933	A3SS	0.16	50	50	ENSMUST00000231722.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17441855	17443808	+	17441855	17446933	A3SS	0.16	50	50	ENSMUST00000231722.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17441855	17444294	+	17441855	17446933	A3SS	0.16	50	50	ENSMUST00000231722.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17449921	17456360	+	17449921	17453346	A3SS&ES	0.33	50	50	ENSMUST00000231722.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17444817	17446933	+	17441855	17446933	A5SS	0.33	50	50	ENSMUST00000231722.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17441855	17444294	+	17441855;17443883	17443808;17444294	ES	0.33	50	50	ENSMUST00000231627.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17439389;17443726	17443584;17444294	+	17439389;17443883	17441769;17444294	MXE	0.5	100	100	ENSMUST00000231627.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17441855;17443726	17443560;17444294	+	17441855;17443883	17443808;17444294	MXE	0.5	100	100	ENSMUST00000231627.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17441855	17443560	+	17441855	17449850	A3SS	0.16	50	50	ENSMUST00000231792.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17441855	17443808	+	17441855	17449850	A3SS	0.16	50	50	ENSMUST00000231792.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17441855	17444294	+	17441855	17449850	A3SS	0.16	50	50	ENSMUST00000231792.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17444817	17449850	+	17441855	17449850	A5SS	0.33	50	50	ENSMUST00000231792.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17439389;17443726	17443584;17444294	+	17439389;17441855	17441769;17444294	MXE	0.5	100	100	ENSMUST00000232021.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17441855;17443726	17443560;17444294	+	17441855	17444294	cassetteExon	0.5	100	100	ENSMUST00000232021.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17441855;17443883	17443560;17444294	+	17441855	17444294	cassetteExon	0.5	100	100	ENSMUST00000232021.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17441855;17443883	17443584;17444294	+	17441855	17444294	cassetteExon	0.5	100	100	ENSMUST00000232021.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17444817	17449850	+	17444817	17446933	3pMXE	0.5	50	50	ENSMUST00000232487.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17449921	17457138	+	17456505	17457138	5pMXE	0.5	50	50	ENSMUST00000231378.2	ENSMUSG00000005899.15	Smpd4	chr16	protein_coding	sphingomyelin phosphodiesterase 4
chr16	17465990	17467859	+	17465990	17466659	3pMXE	0.25	50	50	ENSMUST00000182822.8	ENSMUSG00000041617.11	Ccdc74a	chr16	protein_coding	coiled-coil domain containing 74A
chr16	17465990	17468013	+	17465990	17466659	3pMXE	0.25	50	50	ENSMUST00000182822.8	ENSMUSG00000041617.11	Ccdc74a	chr16	protein_coding	coiled-coil domain containing 74A
chr16	17465990	17468231	+	17465990	17466659	3pMXE	0.25	50	50	ENSMUST00000182822.8	ENSMUSG00000041617.11	Ccdc74a	chr16	protein_coding	coiled-coil domain containing 74A
chr16	17466193	17466659	+	17465990	17466659	A5SS	0.5	50	50	ENSMUST00000182822.8	ENSMUSG00000041617.11	Ccdc74a	chr16	protein_coding	coiled-coil domain containing 74A
chr16	17467938	17468231	+	17467938;17468069	17468013;17468231	ES	0.33	50	50	ENSMUST00000056962.11	ENSMUSG00000041617.11	Ccdc74a	chr16	protein_coding	coiled-coil domain containing 74A
chr16	17465516	17467859	+	17465516	17465931	3pMXE	0.5	50	50	ENSMUST00000183101.2	ENSMUSG00000041617.11	Ccdc74a	chr16	protein_coding	coiled-coil domain containing 74A
chr16	17465516	17467859	+	17465516;17465990	17465931;17467859	ES	0.33	50	50	ENSMUST00000182117.8	ENSMUSG00000041617.11	Ccdc74a	chr16	protein_coding	coiled-coil domain containing 74A
chr16	17465990	17468231	+	17465990;17467938	17467859;17468231	ES	0.33	50	50	ENSMUST00000182117.8	ENSMUSG00000041617.11	Ccdc74a	chr16	protein_coding	coiled-coil domain containing 74A
chr16	17465990;17468069	17468013;17468231	+	17465990;17467938	17467859;17468231	MXE	0.5	100	100	ENSMUST00000182117.8	ENSMUSG00000041617.11	Ccdc74a	chr16	protein_coding	coiled-coil domain containing 74A
chr16	17467777	17467859	+	17465990	17467859	A5SS	0.33	50	50	ENSMUST00000182117.8	ENSMUSG00000041617.11	Ccdc74a	chr16	protein_coding	coiled-coil domain containing 74A
chr16	17465516;17465990	17465931;17468013	+	17465516;17467938	17467859;17468013	MXE	0.5	100	100	ENSMUST00000182976.8	ENSMUSG00000041617.11	Ccdc74a	chr16	protein_coding	coiled-coil domain containing 74A
chr16	17465516;17465990	17465931;17468231	+	17465516;17468069	17467859;17468231	MXE	0.5	100	100	ENSMUST00000182976.8	ENSMUSG00000041617.11	Ccdc74a	chr16	protein_coding	coiled-coil domain containing 74A
chr16	17467777	17467859	+	17465516	17467859	A5SS	0.33	50	50	ENSMUST00000182976.8	ENSMUSG00000041617.11	Ccdc74a	chr16	protein_coding	coiled-coil domain containing 74A
chr16	17465516;17467938	17467859;17468231	+	17465516;17465990	17465931;17468231	MXE	0.5	100	100	ENSMUST00000182671.8	ENSMUSG00000041617.11	Ccdc74a	chr16	protein_coding	coiled-coil domain containing 74A
chr16	17465990;17468069	17467859;17468231	+	17465990	17468231	cassetteExon	0.5	100	100	ENSMUST00000182671.8	ENSMUSG00000041617.11	Ccdc74a	chr16	protein_coding	coiled-coil domain containing 74A
chr16	17465990;17468069	17468013;17468231	+	17465990	17468231	cassetteExon	0.5	100	100	ENSMUST00000182671.8	ENSMUSG00000041617.11	Ccdc74a	chr16	protein_coding	coiled-coil domain containing 74A
chr16	17465516;17467938	17467859;17468231	+	17465516;17468069	17465931;17468231	MXE	0.5	100	100	ENSMUST00000182344.8	ENSMUSG00000041617.11	Ccdc74a	chr16	protein_coding	coiled-coil domain containing 74A
chr16	17465990;17467938	17467859;17468013	+	17465990	17468013	cassetteExon	0.5	100	100	ENSMUST00000182344.8	ENSMUSG00000041617.11	Ccdc74a	chr16	protein_coding	coiled-coil domain containing 74A
chr16	17492522	17503317	-	17492522;17501052	17501023;17503317	ES	0.33	50	50	ENSMUST00000232645.2	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17515558	17524263	-	17515558;17516056	17515941;17524263	ES	0.5	50	50	ENSMUST00000232645.2	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17473669;17489537	17489409;17490933	-	17473669	17490933	cassetteExon	0.5	100	100	ENSMUST00000232645.2	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17492522;17498625	17498413;17501023	-	17492522	17501023	cassetteExon	0.5	100	100	ENSMUST00000232645.2	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17492522;17498625	17498413;17503317	-	17492522;17501052	17501023;17503317	MXE	0.5	100	100	ENSMUST00000232645.2	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17520819	17540620	-	17524347	17540620	A3SS&ES	0.2	50	50	ENSMUST00000232645.2	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17521013	17540620	-	17524347	17540620	A3SS&ES	0.2	50	50	ENSMUST00000232645.2	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17470127	17470569	-	17470127	17470573	A5SS	0.5	50	50	ENSMUST00000232645.2	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17473669	17481241	-	17473669	17490933	A5SS	0.25	50	50	ENSMUST00000232645.2	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17473669	17489409	-	17473669;17481360	17481241;17489409	ES	0.5	50	50	ENSMUST00000012259.9	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17498625	17503317	-	17498625;17501052	17501023;17503317	ES	0.33	50	50	ENSMUST00000012259.9	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17515558	17550364	-	17515558	17540620	5pMXE	0.25	50	50	ENSMUST00000012259.9	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17515558;17524347	17524263;17540620	-	17515558	17540620	cassetteExon	0.5	100	100	ENSMUST00000012259.9	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17520819	17540620	-	17515558	17540620	A3SS	0.2	50	50	ENSMUST00000012259.9	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17521013	17540620	-	17515558	17540620	A3SS	0.2	50	50	ENSMUST00000012259.9	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17515558	17515941	-	17515558	17540620	A5SS	0.25	50	50	ENSMUST00000012259.9	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17515558	17540620	-	17473669	17540620	A3SS	0.2	50	50	ENSMUST00000231674.2	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17520819	17540620	-	17473669	17540620	A3SS	0.2	50	50	ENSMUST00000231674.2	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17521013	17540620	-	17473669	17540620	A3SS	0.2	50	50	ENSMUST00000231674.2	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17524347	17540620	-	17473669	17540620	A3SS	0.2	50	50	ENSMUST00000231674.2	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17473669	17481241	-	17473669	17540620	A5SS	0.25	50	50	ENSMUST00000231674.2	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17473669	17489409	-	17473669	17540620	A5SS	0.25	50	50	ENSMUST00000231674.2	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17473669	17490933	-	17473669	17540620	A5SS	0.25	50	50	ENSMUST00000231674.2	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17492522	17503317	-	17492522;17498625	17498413;17503317	ES	0.33	50	50	ENSMUST00000232202.2	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17492522	17501023	-	17498625	17501023	3pMXE	0.5	50	50	ENSMUST00000232005.2	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17515558	17515941	-	17515558	17550364	A5SS	0.25	50	50	ENSMUST00000231413.2	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17515558	17524263	-	17515558	17550364	A5SS	0.25	50	50	ENSMUST00000231413.2	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17492522	17503317	-	17501052	17503317	3pMXE	0.33	50	50	ENSMUST00000232667.2	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17498625	17503317	-	17501052	17503317	3pMXE	0.33	50	50	ENSMUST00000232667.2	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17521013	17540620	-	17520819	17540620	A3SS	0.2	50	50	ENSMUST00000231494.2	ENSMUSG00000012114.18	Med15	chr16	protein_coding	mediator complex subunit 15
chr16	17577570	17582248	+	17577558	17582248	A5SS	0.2	50	50	ENSMUST00000129199.8	ENSMUSG00000022750.19	Klhl22	chr16	protein_coding	kelch-like 22
chr16	17578214	17582248	+	17577558	17582248	A5SS	0.2	50	50	ENSMUST00000129199.8	ENSMUSG00000022750.19	Klhl22	chr16	protein_coding	kelch-like 22
chr16	17578353	17582248	+	17577558	17582248	A5SS	0.2	50	50	ENSMUST00000129199.8	ENSMUSG00000022750.19	Klhl22	chr16	protein_coding	kelch-like 22
chr16	17580718	17582248	+	17577558	17582248	A5SS	0.2	50	50	ENSMUST00000129199.8	ENSMUSG00000022750.19	Klhl22	chr16	protein_coding	kelch-like 22
chr16	17578214	17582248	+	17577570	17582248	A5SS	0.2	50	50	ENSMUST00000165790.9	ENSMUSG00000022750.19	Klhl22	chr16	protein_coding	kelch-like 22
chr16	17578353	17582248	+	17577570	17582248	A5SS	0.2	50	50	ENSMUST00000165790.9	ENSMUSG00000022750.19	Klhl22	chr16	protein_coding	kelch-like 22
chr16	17580718	17582248	+	17577570	17582248	A5SS	0.2	50	50	ENSMUST00000165790.9	ENSMUSG00000022750.19	Klhl22	chr16	protein_coding	kelch-like 22
chr16	17578353	17582248	+	17578214	17582248	A5SS	0.2	50	50	ENSMUST00000129299.3	ENSMUSG00000022750.19	Klhl22	chr16	protein_coding	kelch-like 22
chr16	17580718	17582248	+	17578214	17582248	A5SS	0.2	50	50	ENSMUST00000129299.3	ENSMUSG00000022750.19	Klhl22	chr16	protein_coding	kelch-like 22
chr16	17580718	17582248	+	17578353	17582248	A5SS	0.2	50	50	ENSMUST00000126600.8	ENSMUSG00000022750.19	Klhl22	chr16	protein_coding	kelch-like 22
chr16	17622788	17624270	+	17622788	17624213	A3SS	0.5	50	50	ENSMUST00000012161.5	ENSMUSG00000012017.5	Scarf2	chr16	protein_coding	scavenger receptor class F, member 2
chr16	17662999	17674616	-	17662999;17667658	17667455;17674616	ES	0.5	50	50	ENSMUST00000150068.2	ENSMUSG00000092470.2	Gm20518	chr16	protein_coding	predicted gene 20518
chr16	17690549	17711266	-	17690549	17709250	5pMXE	0.33	50	50	ENSMUST00000150068.2	ENSMUSG00000092470.2	Gm20518	chr16	protein_coding	predicted gene 20518
chr16	17690549	17715024	-	17690549	17709250	5pMXE	0.33	50	50	ENSMUST00000150068.2	ENSMUSG00000092470.2	Gm20518	chr16	protein_coding	predicted gene 20518
chr16	17676434	17677268	-	17676443	17677268	A3SS	0.5	50	50	ENSMUST00000150068.2	ENSMUSG00000092470.2	Gm20518	chr16	protein_coding	predicted gene 20518
chr16	17677387	17690427	-	17677390	17690427	A3SS	0.5	50	50	ENSMUST00000150068.2	ENSMUSG00000092470.2	Gm20518	chr16	protein_coding	predicted gene 20518
chr16	17710739	17711266	-	17690549	17711266	A3SS	0.5	50	50	ENSMUST00000155943.9	ENSMUSG00000003166.21	Dgcr2	chr16	protein_coding	DiGeorge syndrome critical region gene 2
chr16	17662999	17674616	-	17667658	17674616	3pMXE	0.5	50	50	ENSMUST00000155611.8	ENSMUSG00000003166.21	Dgcr2	chr16	protein_coding	DiGeorge syndrome critical region gene 2
chr16	17690549	17711266	-	17690549	17715024	A5SS	0.33	50	50	ENSMUST00000231750.2	ENSMUSG00000003166.21	Dgcr2	chr16	protein_coding	DiGeorge syndrome critical region gene 2
chr16	17725786	17727769	-	17725783	17727769	A3SS	0.5	50	50	ENSMUST00000232423.2	ENSMUSG00000003527.10	Ess2	chr16	protein_coding	ess-2 splicing factor
chr16	17744604	17745110	-	17744604	17745018	A5SS	0.5	50	50	ENSMUST00000003622.16	ENSMUSG00000003528.16	Slc25a1	chr16	protein_coding	solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1
chr16	17870985	17873113	+	17870985	17882917	A3SS	0.5	50	50	ENSMUST00000143343.8	ENSMUSG00000003531.16	Dgcr6	chr16	protein_coding	DiGeorge syndrome critical region gene 6
chr16	17883048	17883809	+	17883048	17884560	A3SS	0.5	50	50	ENSMUST00000143343.8	ENSMUSG00000003531.16	Dgcr6	chr16	protein_coding	DiGeorge syndrome critical region gene 6
chr16	17887388	17887946	+	17887388	17887955	A3SS	0.5	50	50	ENSMUST00000143343.8	ENSMUSG00000003531.16	Dgcr6	chr16	protein_coding	DiGeorge syndrome critical region gene 6
chr16	17884463	17884560	+	17883048	17884560	A5SS	0.5	50	50	ENSMUST00000143343.8	ENSMUSG00000003531.16	Dgcr6	chr16	protein_coding	DiGeorge syndrome critical region gene 6
chr16	17887377	17887955	+	17887388	17887955	A5SS	0.5	50	50	ENSMUST00000143343.8	ENSMUSG00000003531.16	Dgcr6	chr16	protein_coding	DiGeorge syndrome critical region gene 6
chr16	17902619	17906752	-	17878621	17906752	A3SS	0.5	50	50	ENSMUST00000139861.2	ENSMUSG00000003526.13	Prodh	chr16	protein_coding	proline dehydrogenase
chr16	17890402	17894106	-	17890402;17891517	17891419;17894106	ES	0.5	50	50	ENSMUST00000123969.3	ENSMUSG00000003526.13	Prodh	chr16	protein_coding	proline dehydrogenase
chr16	17895454	17897051	-	17895454;17895747	17895655;17897051	ES	0.5	50	50	ENSMUST00000123969.3	ENSMUSG00000003526.13	Prodh	chr16	protein_coding	proline dehydrogenase
chr16	17899429	17902411	-	17899429	17899913	5pMXE	0.5	50	50	ENSMUST00000123969.3	ENSMUSG00000003526.13	Prodh	chr16	protein_coding	proline dehydrogenase
chr16	17895393	17895655	-	17895454	17895655	A3SS	0.5	50	50	ENSMUST00000123969.3	ENSMUSG00000003526.13	Prodh	chr16	protein_coding	proline dehydrogenase
chr16	17902619	17908007	-	17902619	17906752	5pMXE	0.5	50	50	ENSMUST00000003620.13	ENSMUSG00000003526.13	Prodh	chr16	protein_coding	proline dehydrogenase
chr16	17895454	17897051	-	17895747	17897051	A3SS&ES	0.5	50	50	ENSMUST00000141635.8	ENSMUSG00000003526.13	Prodh	chr16	protein_coding	proline dehydrogenase
chr16	18029062	18031701	-	18029062	18031226	5pMXE	0.5	50	50	ENSMUST00000232008.2	ENSMUSG00000116557.2	4933432I09Rik	chr16	lncRNA	RIKEN cDNA 4933432I09 gene
chr16	18036598;18036799	18036698;18036877	+	18036598	18036877	cassetteExon	0.5	100	100	ENSMUST00000231860.2	ENSMUSG00000090777.3	Ccdc188	chr16	protein_coding	coiled-coil domain containing 188
chr16	18037428;18037745	18037696;18037830	+	18037428	18037830	cassetteExon	0.5	100	100	ENSMUST00000231860.2	ENSMUSG00000090777.3	Ccdc188	chr16	protein_coding	coiled-coil domain containing 188
chr16	18037273	18037377	+	18037245	18037377	A5SS	0.5	50	50	ENSMUST00000231860.2	ENSMUSG00000090777.3	Ccdc188	chr16	protein_coding	coiled-coil domain containing 188
chr16	18039568	18042082	-	18041241	18042082	A3SS	0.5	50	50	ENSMUST00000076957.7	ENSMUSG00000060166.7	Zdhhc8	chr16	protein_coding	zinc finger, DHHC domain containing 8
chr16	18065289	18073385	-	18065289	18066412	5pMXE	0.25	50	50	ENSMUST00000115645.10	ENSMUSG00000005732.15	Ranbp1	chr16	protein_coding	RAN binding protein 1
chr16	18065289	18065891	-	18065289	18066412	A5SS	0.25	50	50	ENSMUST00000115645.10	ENSMUSG00000005732.15	Ranbp1	chr16	protein_coding	RAN binding protein 1
chr16	18065289	18065991	-	18065289	18066412	A5SS	0.25	50	50	ENSMUST00000115645.10	ENSMUSG00000005732.15	Ranbp1	chr16	protein_coding	RAN binding protein 1
chr16	18065289	18065991	-	18065289	18065891	5pMXE	0.25	50	50	ENSMUST00000052325.7	ENSMUSG00000005732.15	Ranbp1	chr16	protein_coding	RAN binding protein 1
chr16	18065289	18073385	-	18065289	18065891	5pMXE	0.25	50	50	ENSMUST00000052325.7	ENSMUSG00000005732.15	Ranbp1	chr16	protein_coding	RAN binding protein 1
chr16	18065289	18073385	-	18065289	18065991	5pMXE	0.25	50	50	ENSMUST00000134035.2	ENSMUSG00000005732.15	Ranbp1	chr16	protein_coding	RAN binding protein 1
chr16	18069524	18070266	+	18069524;18070112	18069990;18070266	ES	0.5	50	50	ENSMUST00000127239.8	ENSMUSG00000022721.20	Trmt2a	chr16	protein_coding	TRM2 tRNA methyltransferase 2A
chr16	18070341	18070788	+	18070341;18070699	18070583;18070788	ES	0.5	50	50	ENSMUST00000127239.8	ENSMUSG00000022721.20	Trmt2a	chr16	protein_coding	TRM2 tRNA methyltransferase 2A
chr16	18067162	18067350	+	18067115	18067350	A5SS	0.5	50	50	ENSMUST00000115640.8	ENSMUSG00000022721.20	Trmt2a	chr16	protein_coding	TRM2 tRNA methyltransferase 2A
chr16	18070341	18070964	+	18070341;18070884	18070788;18070964	ES	0.5	50	50	ENSMUST00000140206.8	ENSMUSG00000022721.20	Trmt2a	chr16	protein_coding	TRM2 tRNA methyltransferase 2A
chr16	18068865	18069413	+	18068865	18069020	A3SS&ES	0.5	50	50	ENSMUST00000059696.12	ENSMUSG00000022721.20	Trmt2a	chr16	protein_coding	TRM2 tRNA methyltransferase 2A
chr16	18068865;18069338	18069020;18069413	+	18068865	18069413	cassetteExon	0.5	100	100	ENSMUST00000145112.9	ENSMUSG00000022721.20	Trmt2a	chr16	protein_coding	TRM2 tRNA methyltransferase 2A
chr16	18068865	18069413	+	18069338	18069413	5pMXE	0.5	50	50	ENSMUST00000128045.3	ENSMUSG00000022721.20	Trmt2a	chr16	protein_coding	TRM2 tRNA methyltransferase 2A
chr16	18069524	18070266	+	18069524	18069990	A3SS&ES	0.5	50	50	ENSMUST00000128045.3	ENSMUSG00000022721.20	Trmt2a	chr16	protein_coding	TRM2 tRNA methyltransferase 2A
chr16	18069524	18070266	+	18070112	18070266	5pMXE	0.5	50	50	ENSMUST00000232293.2	ENSMUSG00000022721.20	Trmt2a	chr16	protein_coding	TRM2 tRNA methyltransferase 2A
chr16	18070341;18070884	18070583;18070964	+	18070341	18070964	cassetteExon	0.5	100	100	ENSMUST00000232293.2	ENSMUSG00000022721.20	Trmt2a	chr16	protein_coding	TRM2 tRNA methyltransferase 2A
chr16	18070341	18070964	+	18070884	18070964	5pMXE	0.5	50	50	ENSMUST00000232015.2	ENSMUSG00000022721.20	Trmt2a	chr16	protein_coding	TRM2 tRNA methyltransferase 2A
chr16	18077519	18090585	-	18077519;18077843	18077743;18090585	ES	0.5	50	50	ENSMUST00000009321.11	ENSMUSG00000022718.13	Dgcr8	chr16	protein_coding	DGCR8, microprocessor complex subunit
chr16	18102560;18103172	18102965;18106967	-	18102560	18106967	cassetteExon	0.5	100	100	ENSMUST00000009321.11	ENSMUSG00000022718.13	Dgcr8	chr16	protein_coding	DGCR8, microprocessor complex subunit
chr16	18105476	18106967	-	18102560	18106967	A3SS	0.33	50	50	ENSMUST00000009321.11	ENSMUSG00000022718.13	Dgcr8	chr16	protein_coding	DGCR8, microprocessor complex subunit
chr16	18077843	18083003	-	18077843	18090585	A5SS	0.5	50	50	ENSMUST00000009321.11	ENSMUSG00000022718.13	Dgcr8	chr16	protein_coding	DGCR8, microprocessor complex subunit
chr16	18102560	18107032	-	18102560	18106967	A5SS	0.33	50	50	ENSMUST00000009321.11	ENSMUSG00000022718.13	Dgcr8	chr16	protein_coding	DGCR8, microprocessor complex subunit
chr16	18102560	18102965	-	18102560	18107032	A5SS	0.33	50	50	ENSMUST00000232424.2	ENSMUSG00000022718.13	Dgcr8	chr16	protein_coding	DGCR8, microprocessor complex subunit
chr16	18105476	18106967	-	18103172	18106967	A3SS	0.33	50	50	ENSMUST00000232414.2	ENSMUSG00000022718.13	Dgcr8	chr16	protein_coding	DGCR8, microprocessor complex subunit
chr16	18128847	18134510	-	18128847;18130622	18130503;18134510	ES	0.5	50	50	ENSMUST00000128580.8	ENSMUSG00000013539.15	Tango2	chr16	protein_coding	transport and golgi organization 2
chr16	18134598;18137651	18137608;18142221	-	18134598	18142221	cassetteExon	0.5	100	100	ENSMUST00000128580.8	ENSMUSG00000013539.15	Tango2	chr16	protein_coding	transport and golgi organization 2
chr16	18121700	18125834	-	18121719	18125834	A3SS	0.5	50	50	ENSMUST00000128580.8	ENSMUSG00000013539.15	Tango2	chr16	protein_coding	transport and golgi organization 2
chr16	18128819	18130503	-	18128847	18130503	A3SS	0.5	50	50	ENSMUST00000128580.8	ENSMUSG00000013539.15	Tango2	chr16	protein_coding	transport and golgi organization 2
chr16	18142314	18165735	-	18142314	18161759	5pMXE	0.2	50	50	ENSMUST00000115628.10	ENSMUSG00000013539.15	Tango2	chr16	protein_coding	transport and golgi organization 2
chr16	18142314;18156941	18156473;18161759	-	18142314	18161759	cassetteExon	0.5	100	100	ENSMUST00000115628.10	ENSMUSG00000013539.15	Tango2	chr16	protein_coding	transport and golgi organization 2
chr16	18121700	18123863	-	18121700	18125834	A5SS	0.5	50	50	ENSMUST00000115628.10	ENSMUSG00000013539.15	Tango2	chr16	protein_coding	transport and golgi organization 2
chr16	18142314	18149218	-	18142314	18161759	A5SS	0.2	50	50	ENSMUST00000115628.10	ENSMUSG00000013539.15	Tango2	chr16	protein_coding	transport and golgi organization 2
chr16	18142314	18161662	-	18142314	18161759	A5SS	0.2	50	50	ENSMUST00000115628.10	ENSMUSG00000013539.15	Tango2	chr16	protein_coding	transport and golgi organization 2
chr16	18142314	18161662	-	18130517	18161662	A3SS	0.5	50	50	ENSMUST00000231605.2	ENSMUSG00000013539.15	Tango2	chr16	protein_coding	transport and golgi organization 2
chr16	18128847	18134510	-	18128847	18130503	A5SS&ES	0.5	50	50	ENSMUST00000231605.2	ENSMUSG00000013539.15	Tango2	chr16	protein_coding	transport and golgi organization 2
chr16	18142314	18156473	-	18142314	18149218	5pMXE	0.2	50	50	ENSMUST00000232588.2	ENSMUSG00000013539.15	Tango2	chr16	protein_coding	transport and golgi organization 2
chr16	18142314	18161662	-	18142314	18149218	5pMXE	0.2	50	50	ENSMUST00000232588.2	ENSMUSG00000013539.15	Tango2	chr16	protein_coding	transport and golgi organization 2
chr16	18142314	18165735	-	18142314	18149218	5pMXE	0.2	50	50	ENSMUST00000232588.2	ENSMUSG00000013539.15	Tango2	chr16	protein_coding	transport and golgi organization 2
chr16	18142314	18165735	-	18142314	18161662	5pMXE	0.2	50	50	ENSMUST00000231372.2	ENSMUSG00000013539.15	Tango2	chr16	protein_coding	transport and golgi organization 2
chr16	18142314	18156473	-	18142314	18161662	A5SS	0.2	50	50	ENSMUST00000231372.2	ENSMUSG00000013539.15	Tango2	chr16	protein_coding	transport and golgi organization 2
chr16	18128847	18134510	-	18130622	18134510	A3SS&ES	0.5	50	50	ENSMUST00000232073.2	ENSMUSG00000013539.15	Tango2	chr16	protein_coding	transport and golgi organization 2
chr16	18142314	18156473	-	18142314	18165735	A5SS	0.2	50	50	ENSMUST00000125287.9	ENSMUSG00000013539.15	Tango2	chr16	protein_coding	transport and golgi organization 2
chr16	18223295	18224357	+	18223295;18223971	18223852;18224357	ES	0.5	50	50	ENSMUST00000239533.1	ENSMUSG00000118669.2	Arvcf	chr16	protein_coding	--
chr16	18219003;18219548	18219531;18220317	+	18219003	18220317	cassetteExon	0.5	100	100	ENSMUST00000239533.1	ENSMUSG00000118669.2	Arvcf	chr16	protein_coding	--
chr16	18219003;18219931	18219531;18220317	+	18219003	18220317	cassetteExon	0.5	100	100	ENSMUST00000239533.1	ENSMUSG00000118669.2	Arvcf	chr16	protein_coding	--
chr16	18198823	18207025	+	18170701	18207025	A5SS	0.5	50	50	ENSMUST00000239533.1	ENSMUSG00000118669.2	Arvcf	chr16	protein_coding	--
chr16	18210577	18214824	+	18207255	18214824	A5SS	0.5	50	50	ENSMUST00000239533.1	ENSMUSG00000118669.2	Arvcf	chr16	protein_coding	--
chr16	18219931	18220317	+	18219548	18220317	A5SS	0.33	50	50	ENSMUST00000239534.1	ENSMUSG00000118669.2	Arvcf	chr16	protein_coding	--
chr16	18223295	18224357	+	18223295	18223852	A3SS	0.5	50	50	ENSMUST00000239538.1	ENSMUSG00000118669.2	Arvcf	chr16	protein_coding	--
chr16	18219003	18220317	+	18219931	18220317	5pMXE	0.33	50	50	ENSMUST00000239549.1	ENSMUSG00000118669.2	Arvcf	chr16	protein_coding	--
chr16	18230707	18243054	-	18230707	18232016	5pMXE	0.33	50	50	ENSMUST00000165430.8	ENSMUSG00000000326.14	Comt	chr16	protein_coding	catechol-O-methyltransferase
chr16	18230707	18245106	-	18230707	18232016	5pMXE	0.33	50	50	ENSMUST00000165430.8	ENSMUSG00000000326.14	Comt	chr16	protein_coding	catechol-O-methyltransferase
chr16	18230707;18243110	18243054;18245106	-	18230707	18245106	cassetteExon	0.5	100	100	ENSMUST00000115609.10	ENSMUSG00000000326.14	Comt	chr16	protein_coding	catechol-O-methyltransferase
chr16	18290999	18293432	+	18290999;18291636	18291544;18293432	ES	0.5	50	50	ENSMUST00000205679.3	ENSMUSG00000075704.18	Txnrd2	chr16	protein_coding	thioredoxin reductase 2
chr16	18245309;18248626	18248561;18255311	+	18245309	18255311	cassetteExon	0.5	100	100	ENSMUST00000205679.3	ENSMUSG00000075704.18	Txnrd2	chr16	protein_coding	thioredoxin reductase 2
chr16	18245309;18248626	18248561;18256252	+	18245309;18255367	18255311;18256252	MXE	0.5	100	100	ENSMUST00000205679.3	ENSMUSG00000075704.18	Txnrd2	chr16	protein_coding	thioredoxin reductase 2
chr16	18262024;18270887	18270721;18272471	+	18262024	18272471	cassetteExon	0.5	100	100	ENSMUST00000205679.3	ENSMUSG00000075704.18	Txnrd2	chr16	protein_coding	thioredoxin reductase 2
chr16	18262024;18270887	18270721;18274774	+	18262024;18273330	18272471;18274774	MXE	0.5	100	100	ENSMUST00000205679.3	ENSMUSG00000075704.18	Txnrd2	chr16	protein_coding	thioredoxin reductase 2
chr16	18260560	18260694	+	18260560	18261954	A3SS	0.5	50	50	ENSMUST00000205679.3	ENSMUSG00000075704.18	Txnrd2	chr16	protein_coding	thioredoxin reductase 2
chr16	18294369	18296423	+	18294369	18296401	A3SS	0.5	50	50	ENSMUST00000205679.3	ENSMUSG00000075704.18	Txnrd2	chr16	protein_coding	thioredoxin reductase 2
chr16	18290630	18290904	+	18287636	18290904	A5SS	0.33	50	50	ENSMUST00000205679.3	ENSMUSG00000075704.18	Txnrd2	chr16	protein_coding	thioredoxin reductase 2
chr16	18290808	18290904	+	18287636	18290904	A5SS	0.33	50	50	ENSMUST00000205679.3	ENSMUSG00000075704.18	Txnrd2	chr16	protein_coding	thioredoxin reductase 2
chr16	18248626	18256252	+	18248626;18255367	18255311;18256252	ES	0.5	50	50	ENSMUST00000206606.3	ENSMUSG00000075704.18	Txnrd2	chr16	protein_coding	thioredoxin reductase 2
chr16	18247505	18248561	+	18245309	18248561	A5SS	0.33	50	50	ENSMUST00000206606.3	ENSMUSG00000075704.18	Txnrd2	chr16	protein_coding	thioredoxin reductase 2
chr16	18247779	18248561	+	18245309	18248561	A5SS	0.33	50	50	ENSMUST00000206606.3	ENSMUSG00000075704.18	Txnrd2	chr16	protein_coding	thioredoxin reductase 2
chr16	18262024	18272471	+	18262024	18270721	A3SS&ES	0.5	50	50	ENSMUST00000177856.8	ENSMUSG00000075704.18	Txnrd2	chr16	protein_coding	thioredoxin reductase 2
chr16	18270887	18274774	+	18273330	18274774	A5SS&ES	0.5	50	50	ENSMUST00000177856.8	ENSMUSG00000075704.18	Txnrd2	chr16	protein_coding	thioredoxin reductase 2
chr16	18247779	18248561	+	18247505	18248561	A5SS	0.33	50	50	ENSMUST00000126778.8	ENSMUSG00000075704.18	Txnrd2	chr16	protein_coding	thioredoxin reductase 2
chr16	18262024	18272471	+	18270887	18272471	5pMXE	0.5	50	50	ENSMUST00000149937.8	ENSMUSG00000075704.18	Txnrd2	chr16	protein_coding	thioredoxin reductase 2
chr16	18270887	18272471	+	18270887	18274774	A3SS	0.5	50	50	ENSMUST00000153457.8	ENSMUSG00000075704.18	Txnrd2	chr16	protein_coding	thioredoxin reductase 2
chr16	18290808	18290904	+	18290630	18290904	A5SS	0.33	50	50	ENSMUST00000126330.8	ENSMUSG00000075704.18	Txnrd2	chr16	protein_coding	thioredoxin reductase 2
chr16	18317890;18357246	18357142;18359185	+	18317890	18359185	cassetteExon	0.5	100	100	ENSMUST00000231621.2	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18363023;18363963	18363867;18366843	+	18363023	18366843	cassetteExon	0.5	100	100	ENSMUST00000231621.2	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18366941;18367809	18367685;18371117	+	18366941	18371117	cassetteExon	0.5	100	100	ENSMUST00000231621.2	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317890	18319690	+	18317890	18359185	A3SS	0.12	50	50	ENSMUST00000231621.2	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317890	18362865	+	18317890	18359185	A3SS&ES	0.12	50	50	ENSMUST00000231621.2	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18359847	18362865	+	18359847	18362861	A3SS	0.5	50	50	ENSMUST00000231621.2	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18366941	18371159	+	18366941	18371117	A3SS	0.33	50	50	ENSMUST00000231621.2	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317701	18317796	+	18317601	18317796	A5SS	0.5	50	50	ENSMUST00000231621.2	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317890	18362861	+	18317890	18359185	A3SS&ES	0.12	50	50	ENSMUST00000000904.15	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317890	18366843	+	18317890;18363023	18362865;18366843	ES	0.33	50	50	ENSMUST00000139625.8	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317890	18319690	+	18317890	18362865	A3SS	0.14	50	50	ENSMUST00000139625.8	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317890	18357142	+	18317890	18362865	A3SS	0.14	50	50	ENSMUST00000139625.8	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317890	18362861	+	18317890	18362865	A3SS	0.14	50	50	ENSMUST00000139625.8	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18359847	18362865	+	18317890	18362865	A5SS	0.5	50	50	ENSMUST00000139625.8	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317890	18382785	+	18317890	18371117	3pMXE	0.12	50	50	ENSMUST00000129952.8	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317890;18366941	18366843;18371117	+	18317890	18371117	cassetteExon	0.5	100	100	ENSMUST00000129952.8	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317890	18319690	+	18317890	18371117	A3SS	0.12	50	50	ENSMUST00000129952.8	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317890	18357142	+	18317890	18371117	A3SS	0.12	50	50	ENSMUST00000129952.8	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317890	18359185	+	18317890	18371117	A3SS	0.12	50	50	ENSMUST00000129952.8	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317890	18362861	+	18317890	18371117	A3SS	0.12	50	50	ENSMUST00000129952.8	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317890	18362865	+	18317890	18371117	A3SS	0.12	50	50	ENSMUST00000129952.8	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18367809	18371117	+	18317890	18371117	A5SS	0.33	50	50	ENSMUST00000129952.8	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317890	18366843	+	18317890;18363023	18362861;18366843	ES	0.33	50	50	ENSMUST00000149035.8	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317890	18319690	+	18317890	18362861	A3SS	0.14	50	50	ENSMUST00000149035.8	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317890	18357142	+	18317890	18362861	A3SS	0.14	50	50	ENSMUST00000149035.8	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18366941	18367685	+	18366941	18371159	A3SS	0.33	50	50	ENSMUST00000149035.8	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18359847	18362861	+	18317890	18362861	A5SS	0.5	50	50	ENSMUST00000149035.8	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317890	18319690	+	18317890	18366843	A3SS	0.14	50	50	ENSMUST00000124924.8	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317890	18357142	+	18317890	18366843	A3SS	0.14	50	50	ENSMUST00000124924.8	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317890	18359185	+	18317890	18366843	A3SS	0.14	50	50	ENSMUST00000124924.8	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317890	18371117	+	18317890	18366843	A3SS&ES	0.14	50	50	ENSMUST00000124924.8	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18363963	18366843	+	18317890	18366843	A5SS	0.33	50	50	ENSMUST00000124924.8	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317890	18319690	+	18317890	18357142	A3SS	0.2	50	50	ENSMUST00000147739.8	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317890;18371332	18371117;18382785	+	18317890	18382785	cassetteExon	0.5	100	100	ENSMUST00000232235.2	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317890	18319690	+	18317890	18382785	A3SS	0.12	50	50	ENSMUST00000232235.2	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317890	18357142	+	18317890	18382785	A3SS	0.12	50	50	ENSMUST00000232235.2	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317890	18359185	+	18317890	18382785	A3SS	0.12	50	50	ENSMUST00000232235.2	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317890	18362861	+	18317890	18382785	A3SS	0.12	50	50	ENSMUST00000232235.2	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317890	18362865	+	18317890	18382785	A3SS	0.12	50	50	ENSMUST00000232235.2	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18317890	18366843	+	18317890	18382785	A3SS	0.12	50	50	ENSMUST00000232235.2	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18366941	18371117	+	18367809	18371117	5pMXE	0.33	50	50	ENSMUST00000151253.2	ENSMUSG00000000884.18	Gnb1l	chr16	protein_coding	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16	18403886	18405290	-	18403886	18405286	A5SS	0.5	50	50	ENSMUST00000232335.2	ENSMUSG00000009097.11	Tbx1	chr16	protein_coding	T-box 1
chr16	18406856	18407419	-	18406856	18409379	A5SS	0.5	50	50	ENSMUST00000009241.7	ENSMUSG00000009097.11	Tbx1	chr16	protein_coding	T-box 1
chr16	18440082	18441665	-	18440082	18440321	5pMXE	0.5	50	50	ENSMUST00000167388.3	ENSMUSG00000050761.5	Gp1bb	chr16	protein_coding	glycoprotein Ib, beta polypeptide
chr16	18441990	18442861	-	18441990;18442167	18442071;18442861	ES	0.33	50	50	ENSMUST00000231335.2	ENSMUSG00000116594.2	Gm49601	chr16	protein_coding	predicted gene, 49601
chr16	18444191	18448401	-	18444191	18444838	5pMXE	0.5	50	50	ENSMUST00000231335.2	ENSMUSG00000116594.2	Gm49601	chr16	protein_coding	predicted gene, 49601
chr16	18441546	18441665	-	18440082	18441665	A3SS	0.5	50	50	ENSMUST00000231335.2	ENSMUSG00000116594.2	Gm49601	chr16	protein_coding	predicted gene, 49601
chr16	18442203	18442861	-	18442167	18442861	A3SS	0.33	50	50	ENSMUST00000231335.2	ENSMUSG00000116594.2	Gm49601	chr16	protein_coding	predicted gene, 49601
chr16	18441990	18442861	-	18441990	18442071	5pMXE	0.5	50	50	ENSMUST00000231642.2	ENSMUSG00000116594.2	Gm49601	chr16	protein_coding	predicted gene, 49601
chr16	18441990;18442203	18442071;18442861	-	18441990	18442861	cassetteExon	0.5	100	100	ENSMUST00000231244.2	ENSMUSG00000072214.8	Septin5	chr16	protein_coding	septin 5
chr16	18626173	18629139	-	18626173;18627619	18627482;18629139	ES	0.5	50	50	ENSMUST00000000028.14	ENSMUSG00000000028.16	Cdc45	chr16	protein_coding	cell division cycle 45
chr16	18630633;18631167	18631009;18633580	+	18630633	18633580	cassetteExon	0.5	100	100	ENSMUST00000168822.2	ENSMUSG00000005262.14	Ufd1	chr16	protein_coding	ubiquitin recognition factor in ER-associated degradation 1
chr16	18633712	18634079	+	18633686	18634079	A5SS	0.5	50	50	ENSMUST00000168822.2	ENSMUSG00000005262.14	Ufd1	chr16	protein_coding	ubiquitin recognition factor in ER-associated degradation 1
chr16	18634111	18639789	+	18634111	18636653	3pMXE	0.33	50	50	ENSMUST00000232311.2	ENSMUSG00000005262.14	Ufd1	chr16	protein_coding	ubiquitin recognition factor in ER-associated degradation 1
chr16	18634111;18634766	18634602;18636653	+	18634111	18636653	cassetteExon	0.5	100	100	ENSMUST00000232311.2	ENSMUSG00000005262.14	Ufd1	chr16	protein_coding	ubiquitin recognition factor in ER-associated degradation 1
chr16	18630633	18631009	+	18630828	18631009	A5SS	0.5	50	50	ENSMUST00000232311.2	ENSMUSG00000005262.14	Ufd1	chr16	protein_coding	ubiquitin recognition factor in ER-associated degradation 1
chr16	18630633	18633580	+	18631167	18633580	A5SS&ES	0.5	50	50	ENSMUST00000232311.2	ENSMUSG00000005262.14	Ufd1	chr16	protein_coding	ubiquitin recognition factor in ER-associated degradation 1
chr16	18634111	18639789	+	18634111;18636774	18636653;18639789	ES	0.5	50	50	ENSMUST00000115578.10	ENSMUSG00000005262.14	Ufd1	chr16	protein_coding	ubiquitin recognition factor in ER-associated degradation 1
chr16	18634111	18636653	+	18634111	18634602	3pMXE	0.33	50	50	ENSMUST00000164795.2	ENSMUSG00000005262.14	Ufd1	chr16	protein_coding	ubiquitin recognition factor in ER-associated degradation 1
chr16	18634111	18639789	+	18634111	18634602	3pMXE	0.33	50	50	ENSMUST00000164795.2	ENSMUSG00000005262.14	Ufd1	chr16	protein_coding	ubiquitin recognition factor in ER-associated degradation 1
chr16	18655369	18657840	+	18655369;18655623	18655456;18657840	ES	0.5	50	50	ENSMUST00000055413.13	ENSMUSG00000071632.11	2510002D24Rik	chr16	protein_coding	RIKEN cDNA 2510002D24 gene
chr16	18655623	18713524	+	18655623	18657840	3pMXE	0.33	50	50	ENSMUST00000055413.13	ENSMUSG00000071632.11	2510002D24Rik	chr16	protein_coding	RIKEN cDNA 2510002D24 gene
chr16	18655623	18655984	+	18655623	18657840	A3SS	0.33	50	50	ENSMUST00000055413.13	ENSMUSG00000071632.11	2510002D24Rik	chr16	protein_coding	RIKEN cDNA 2510002D24 gene
chr16	18655623	18713524	+	18655623	18655984	3pMXE	0.33	50	50	ENSMUST00000123146.8	ENSMUSG00000071632.11	2510002D24Rik	chr16	protein_coding	RIKEN cDNA 2510002D24 gene
chr16	18655369	18657840	+	18655623	18657840	5pMXE	0.5	50	50	ENSMUST00000190776.2	ENSMUSG00000071632.11	2510002D24Rik	chr16	protein_coding	RIKEN cDNA 2510002D24 gene
chr16	18713586;18714677	18714653;18715204	+	18713586	18715204	cassetteExon	0.5	100	100	ENSMUST00000190050.2	ENSMUSG00000099908.2	Gm28539	chr16	protein_coding	predicted gene 28539
chr16	18713586;18714796	18714653;18715204	+	18713586	18715204	cassetteExon	0.5	100	100	ENSMUST00000190050.2	ENSMUSG00000099908.2	Gm28539	chr16	protein_coding	predicted gene 28539
chr16	18765297;18765992	18765894;18766164	+	18765297	18766164	cassetteExon	0.5	100	100	ENSMUST00000190050.2	ENSMUSG00000099908.2	Gm28539	chr16	protein_coding	predicted gene 28539
chr16	18770465;18770919	18770814;18772745	+	18770465	18772745	cassetteExon	0.5	100	100	ENSMUST00000190050.2	ENSMUSG00000099908.2	Gm28539	chr16	protein_coding	predicted gene 28539
chr16	18655369	18657840	+	18655369	18655456	A3SS&ES	0.5	50	50	ENSMUST00000190050.2	ENSMUSG00000099908.2	Gm28539	chr16	protein_coding	predicted gene 28539
chr16	18695964	18713524	+	18655623	18713524	A5SS	0.33	50	50	ENSMUST00000190050.2	ENSMUSG00000099908.2	Gm28539	chr16	protein_coding	predicted gene 28539
chr16	18696269	18713524	+	18655623	18713524	A5SS	0.33	50	50	ENSMUST00000190050.2	ENSMUSG00000099908.2	Gm28539	chr16	protein_coding	predicted gene 28539
chr16	18715523	18716448	+	18715314	18716448	A5SS	0.5	50	50	ENSMUST00000190050.2	ENSMUSG00000099908.2	Gm28539	chr16	protein_coding	predicted gene 28539
chr16	18762064	18765096	+	18753929	18765096	A5SS	0.5	50	50	ENSMUST00000190050.2	ENSMUSG00000099908.2	Gm28539	chr16	protein_coding	predicted gene 28539
chr16	18694186	18695221	-	18694157	18695221	A3SS	0.5	50	50	ENSMUST00000023391.16	ENSMUSG00000022706.17	Mrpl40	chr16	protein_coding	mitochondrial ribosomal protein L40
chr16	18696269	18713524	+	18695964	18713524	A5SS	0.33	50	50	ENSMUST00000120532.9	ENSMUSG00000022702.17	Hira	chr16	protein_coding	histone cell cycle regulator
chr16	18714796	18715204	+	18714677	18715204	A5SS	0.33	50	50	ENSMUST00000153397.8	ENSMUSG00000022702.17	Hira	chr16	protein_coding	histone cell cycle regulator
chr16	19079455	19079549	-	19079452	19079549	A3SS	0.5	50	50	ENSMUST00000103752.3	ENSMUSG00000076940.4	Iglv2	chr16	IG_V_gene	immunoglobulin lambda variable 2
chr16	19303568	19305553	+	19303734	19305553	A5SS	0.5	50	50	ENSMUST00000216465.2	ENSMUSG00000056822.5	Olfr166	chr16	protein_coding	olfactory receptor 166
chr16	19335477	19340752	-	19334275	19340752	A3SS	0.5	50	50	ENSMUST00000217566.2	ENSMUSG00000045341.3	Olfr167	chr16	protein_coding	olfactory receptor 167
chr16	19385651;19387075	19386966;19387385	-	19385651	19387385	cassetteExon	0.5	100	100	ENSMUST00000215040.2	ENSMUSG00000068535.3	Olfr169	chr16	protein_coding	olfactory receptor 169
chr16	19387483	19390306	-	19387483	19390297	A5SS	0.5	50	50	ENSMUST00000215040.2	ENSMUSG00000068535.3	Olfr169	chr16	protein_coding	olfactory receptor 169
chr16	19583964	19587494	+	19583964;19584371	19584251;19587494	ES	0.5	50	50	ENSMUST00000121344.8	ENSMUSG00000022686.15	B3gnt5	chr16	protein_coding	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
chr16	19579577;19583103	19582901;19583858	+	19579577	19583858	cassetteExon	0.5	100	100	ENSMUST00000121344.8	ENSMUSG00000022686.15	B3gnt5	chr16	protein_coding	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
chr16	19580044	19583858	+	19579577	19583858	A5SS	0.33	50	50	ENSMUST00000121344.8	ENSMUSG00000022686.15	B3gnt5	chr16	protein_coding	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
chr16	19580044	19583858	+	19583103	19583858	A5SS&ES	0.33	50	50	ENSMUST00000164397.8	ENSMUSG00000022686.15	B3gnt5	chr16	protein_coding	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
chr16	19583964	19587494	+	19583964	19584251	3pMXE	0.5	50	50	ENSMUST00000152845.8	ENSMUSG00000022686.15	B3gnt5	chr16	protein_coding	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
chr16	19579577	19583858	+	19579577	19582901	3pMXE	0.5	50	50	ENSMUST00000155780.2	ENSMUSG00000022686.15	B3gnt5	chr16	protein_coding	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
chr16	19776103	19801467	-	19776103;19784849	19784684;19801467	ES	0.33	50	50	ENSMUST00000058839.10	ENSMUSG00000043008.10	Klhl6	chr16	protein_coding	kelch-like 6
chr16	19785063	19801467	-	19784849	19801467	A3SS	0.33	50	50	ENSMUST00000058839.10	ENSMUSG00000043008.10	Klhl6	chr16	protein_coding	kelch-like 6
chr16	19776103	19801467	-	19776103	19784684	5pMXE	0.5	50	50	ENSMUST00000171910.2	ENSMUSG00000043008.10	Klhl6	chr16	protein_coding	kelch-like 6
chr16	19776103;19785063	19784684;19801467	-	19776103	19801467	cassetteExon	0.5	100	100	ENSMUST00000166801.2	ENSMUSG00000043008.10	Klhl6	chr16	protein_coding	kelch-like 6
chr16	19776103	19801467	-	19785063	19801467	3pMXE	0.33	50	50	ENSMUST00000165530.2	ENSMUSG00000043008.10	Klhl6	chr16	protein_coding	kelch-like 6
chr16	19916421	19925413	+	19916421;19920804	19920742;19925413	ES	0.5	50	50	ENSMUST00000023509.5	ENSMUSG00000062901.4	Klhl24	chr16	protein_coding	kelch-like 24
chr16	19916421;19917863	19917736;19920742	+	19916421	19920742	cassetteExon	0.5	100	100	ENSMUST00000023509.5	ENSMUSG00000062901.4	Klhl24	chr16	protein_coding	kelch-like 24
chr16	19916421	19917736	+	19916421	19925413	A3SS	0.33	50	50	ENSMUST00000232088.2	ENSMUSG00000062901.4	Klhl24	chr16	protein_coding	kelch-like 24
chr16	20024995	20027169	+	20024995;20026543	20026374;20027169	ES	0.5	50	50	ENSMUST00000090052.11	ENSMUSG00000041215.17	Yeats2	chr16	protein_coding	YEATS domain containing 2
chr16	19959985;19969310	19969192;19971659	+	19959985	19971659	cassetteExon	0.5	100	100	ENSMUST00000090052.11	ENSMUSG00000041215.17	Yeats2	chr16	protein_coding	YEATS domain containing 2
chr16	20009239	20011912	+	20009239	20011909	A3SS	0.5	50	50	ENSMUST00000090052.11	ENSMUSG00000041215.17	Yeats2	chr16	protein_coding	YEATS domain containing 2
chr16	20038441	20040411	+	20038441	20040424	A3SS	0.5	50	50	ENSMUST00000090052.11	ENSMUSG00000041215.17	Yeats2	chr16	protein_coding	YEATS domain containing 2
chr16	19975873	19977887	+	19975882	19977887	A5SS	0.5	50	50	ENSMUST00000090052.11	ENSMUSG00000041215.17	Yeats2	chr16	protein_coding	YEATS domain containing 2
chr16	20013936	20022405	+	20012576	20022405	A5SS	0.5	50	50	ENSMUST00000090052.11	ENSMUSG00000041215.17	Yeats2	chr16	protein_coding	YEATS domain containing 2
chr16	19960411	19969192	+	19959985	19969192	A5SS	0.5	50	50	ENSMUST00000115560.4	ENSMUSG00000041215.17	Yeats2	chr16	protein_coding	YEATS domain containing 2
chr16	20024995	20027169	+	20026543	20027169	5pMXE	0.5	50	50	ENSMUST00000232094.2	ENSMUSG00000041215.17	Yeats2	chr16	protein_coding	YEATS domain containing 2
chr16	20101570	20104515	-	20101570;20101775	20101674;20104515	ES	0.33	50	50	ENSMUST00000152887.3	ENSMUSG00000033918.17	Parl	chr16	protein_coding	presenilin associated, rhomboid-like
chr16	20106702	20116343	-	20106702;20112152	20112104;20116343	ES	0.5	50	50	ENSMUST00000152887.3	ENSMUSG00000033918.17	Parl	chr16	protein_coding	presenilin associated, rhomboid-like
chr16	20117076	20120959	-	20117076	20120380	5pMXE	0.33	50	50	ENSMUST00000152887.3	ENSMUSG00000033918.17	Parl	chr16	protein_coding	presenilin associated, rhomboid-like
chr16	20101681	20104515	-	20101775	20104515	A3SS	0.33	50	50	ENSMUST00000152887.3	ENSMUSG00000033918.17	Parl	chr16	protein_coding	presenilin associated, rhomboid-like
chr16	20116476	20116881	-	20116483	20116881	A3SS	0.5	50	50	ENSMUST00000152887.3	ENSMUSG00000033918.17	Parl	chr16	protein_coding	presenilin associated, rhomboid-like
chr16	20106702	20112048	-	20106702	20112104	A5SS	0.33	50	50	ENSMUST00000152887.3	ENSMUSG00000033918.17	Parl	chr16	protein_coding	presenilin associated, rhomboid-like
chr16	20117076	20119989	-	20117076	20120380	A5SS	0.33	50	50	ENSMUST00000152887.3	ENSMUSG00000033918.17	Parl	chr16	protein_coding	presenilin associated, rhomboid-like
chr16	20106702	20116343	-	20106702;20112152	20112048;20116343	ES	0.5	50	50	ENSMUST00000136252.8	ENSMUSG00000033918.17	Parl	chr16	protein_coding	presenilin associated, rhomboid-like
chr16	20117076	20119989	-	20117076	20120959	A5SS	0.33	50	50	ENSMUST00000136252.8	ENSMUSG00000033918.17	Parl	chr16	protein_coding	presenilin associated, rhomboid-like
chr16	20101570;20101681	20101674;20104515	-	20101570	20104515	cassetteExon	0.5	100	100	ENSMUST00000232036.2	ENSMUSG00000033918.17	Parl	chr16	protein_coding	presenilin associated, rhomboid-like
chr16	20117076	20120959	-	20106702	20120959	A3SS	0.5	50	50	ENSMUST00000232484.2	ENSMUSG00000033918.17	Parl	chr16	protein_coding	presenilin associated, rhomboid-like
chr16	20106702	20112048	-	20106702	20120959	A5SS	0.25	50	50	ENSMUST00000232484.2	ENSMUSG00000033918.17	Parl	chr16	protein_coding	presenilin associated, rhomboid-like
chr16	20106702	20112104	-	20106702	20120959	A5SS	0.25	50	50	ENSMUST00000232484.2	ENSMUSG00000033918.17	Parl	chr16	protein_coding	presenilin associated, rhomboid-like
chr16	20106702	20116343	-	20106702	20120959	A5SS	0.25	50	50	ENSMUST00000232484.2	ENSMUSG00000033918.17	Parl	chr16	protein_coding	presenilin associated, rhomboid-like
chr16	20101570	20104515	-	20101570	20101674	5pMXE	0.5	50	50	ENSMUST00000155832.2	ENSMUSG00000033918.17	Parl	chr16	protein_coding	presenilin associated, rhomboid-like
chr16	20106702	20116343	-	20112152	20116343	3pMXE	0.5	50	50	ENSMUST00000143648.2	ENSMUSG00000033918.17	Parl	chr16	protein_coding	presenilin associated, rhomboid-like
chr16	20128731	20130979	-	20128731;20128973	20128832;20130979	ES	0.5	50	50	ENSMUST00000023513.12	ENSMUSG00000022818.14	Cyp2ab1	chr16	protein_coding	cytochrome P450, family 2, subfamily ab, polypeptide 1
chr16	20133854	20134623	-	20133854	20141648	A5SS	0.5	50	50	ENSMUST00000023513.12	ENSMUSG00000022818.14	Cyp2ab1	chr16	protein_coding	cytochrome P450, family 2, subfamily ab, polypeptide 1
chr16	20157704	20176119	-	20157704;20163544	20163385;20176119	ES	0.5	50	50	ENSMUST00000079158.13	ENSMUSG00000022822.17	Abcc5	chr16	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 5
chr16	20224634;20237559	20237473;20241055	-	20224634	20241055	cassetteExon	0.5	100	100	ENSMUST00000079158.13	ENSMUSG00000022822.17	Abcc5	chr16	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 5
chr16	20187955	20190870	-	20187960	20190870	A3SS	0.5	50	50	ENSMUST00000079158.13	ENSMUSG00000022822.17	Abcc5	chr16	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 5
chr16	20211672	20214765	-	20211557	20214765	A3SS	0.5	50	50	ENSMUST00000079158.13	ENSMUSG00000022822.17	Abcc5	chr16	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 5
chr16	20221084	20223316	-	20218789	20223316	A3SS	0.5	50	50	ENSMUST00000079158.13	ENSMUSG00000022822.17	Abcc5	chr16	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 5
chr16	20241235	20244598	-	20241235	20244998	A5SS	0.5	50	50	ENSMUST00000079158.13	ENSMUSG00000022822.17	Abcc5	chr16	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 5
chr16	20157704	20176119	-	20163544	20176119	3pMXE	0.5	50	50	ENSMUST00000137985.2	ENSMUSG00000022822.17	Abcc5	chr16	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 5
chr16	20327569	20327688	+	20327569	20327711	A3SS	0.5	50	50	ENSMUST00000003320.14	ENSMUSG00000003235.14	Eif2b5	chr16	protein_coding	eukaryotic translation initiation factor 2B, subunit 5 epsilon
chr16	20324108	20324212	+	20324090	20324212	A5SS	0.5	50	50	ENSMUST00000003320.14	ENSMUSG00000003235.14	Eif2b5	chr16	protein_coding	eukaryotic translation initiation factor 2B, subunit 5 epsilon
chr16	20344906	20345068	+	20344906	20345017	A3SS	0.5	50	50	ENSMUST00000003318.13	ENSMUSG00000003233.13	Dvl3	chr16	protein_coding	dishevelled segment polarity protein 3
chr16	20354351	20358058	+	20354351;20356484	20356368;20358058	ES	0.5	50	50	ENSMUST00000090023.13	ENSMUSG00000022841.16	Ap2m1	chr16	protein_coding	adaptor-related protein complex 2, mu 1 subunit
chr16	20356484	20359083	+	20356484;20358323	20358058;20359083	ES	0.5	50	50	ENSMUST00000090023.13	ENSMUSG00000022841.16	Ap2m1	chr16	protein_coding	adaptor-related protein complex 2, mu 1 subunit
chr16	20359165;20359563	20359558;20359725	+	20359165	20359725	cassetteExon	0.5	100	100	ENSMUST00000090023.13	ENSMUSG00000022841.16	Ap2m1	chr16	protein_coding	adaptor-related protein complex 2, mu 1 subunit
chr16	20354351;20356484	20356368;20359083	+	20354351;20358323	20358058;20359083	MXE	0.5	100	100	ENSMUST00000232001.2	ENSMUSG00000022841.16	Ap2m1	chr16	protein_coding	adaptor-related protein complex 2, mu 1 subunit
chr16	20354351	20358058	+	20354351	20356368	3pMXE	0.5	50	50	ENSMUST00000133443.2	ENSMUSG00000022841.16	Ap2m1	chr16	protein_coding	adaptor-related protein complex 2, mu 1 subunit
chr16	20359165	20359725	+	20359563	20359725	5pMXE	0.5	50	50	ENSMUST00000135420.3	ENSMUSG00000022841.16	Ap2m1	chr16	protein_coding	adaptor-related protein complex 2, mu 1 subunit
chr16	20368851	20369171	+	20368851;20369074	20368952;20369171	ES	0.5	50	50	ENSMUST00000003319.6	ENSMUSG00000003234.17	Abcf3	chr16	protein_coding	ATP-binding cassette, sub-family F (GCN20), member 3
chr16	20369437	20370229	+	20369437	20370224	A3SS	0.5	50	50	ENSMUST00000003319.6	ENSMUSG00000003234.17	Abcf3	chr16	protein_coding	ATP-binding cassette, sub-family F (GCN20), member 3
chr16	20370904	20371073	+	20370904	20371009	A3SS	0.5	50	50	ENSMUST00000003319.6	ENSMUSG00000003234.17	Abcf3	chr16	protein_coding	ATP-binding cassette, sub-family F (GCN20), member 3
chr16	20367845	20367985	+	20367863	20367985	A5SS	0.5	50	50	ENSMUST00000003319.6	ENSMUSG00000003234.17	Abcf3	chr16	protein_coding	ATP-binding cassette, sub-family F (GCN20), member 3
chr16	20377498	20378041	+	20377579	20378041	A5SS	0.5	50	50	ENSMUST00000003319.6	ENSMUSG00000003234.17	Abcf3	chr16	protein_coding	ATP-binding cassette, sub-family F (GCN20), member 3
chr16	20409031	20409423	+	20409031;20409281	20409220;20409423	ES	0.5	50	50	ENSMUST00000100074.10	ENSMUSG00000046613.20	Vwa5b2	chr16	protein_coding	von Willebrand factor A domain containing 5B2
chr16	20409031	20409105	+	20409031	20409220	A3SS	0.25	50	50	ENSMUST00000100074.10	ENSMUSG00000046613.20	Vwa5b2	chr16	protein_coding	von Willebrand factor A domain containing 5B2
chr16	20409031	20409426	+	20409031	20409220	A3SS&ES	0.25	50	50	ENSMUST00000100074.10	ENSMUSG00000046613.20	Vwa5b2	chr16	protein_coding	von Willebrand factor A domain containing 5B2
chr16	20409281	20409403	+	20409281	20409423	A3SS	0.5	50	50	ENSMUST00000100074.10	ENSMUSG00000046613.20	Vwa5b2	chr16	protein_coding	von Willebrand factor A domain containing 5B2
chr16	20409648	20409887	+	20409648	20409902	A3SS	0.5	50	50	ENSMUST00000100074.10	ENSMUSG00000046613.20	Vwa5b2	chr16	protein_coding	von Willebrand factor A domain containing 5B2
chr16	20410050	20410108	+	20410050	20410130	A3SS	0.5	50	50	ENSMUST00000100074.10	ENSMUSG00000046613.20	Vwa5b2	chr16	protein_coding	von Willebrand factor A domain containing 5B2
chr16	20415880	20415959	+	20415880	20415973	A3SS	0.5	50	50	ENSMUST00000100074.10	ENSMUSG00000046613.20	Vwa5b2	chr16	protein_coding	von Willebrand factor A domain containing 5B2
chr16	20416160	20416263	+	20416181	20416263	A5SS	0.5	50	50	ENSMUST00000100074.10	ENSMUSG00000046613.20	Vwa5b2	chr16	protein_coding	von Willebrand factor A domain containing 5B2
chr16	20409031	20409105	+	20409031	20409426	A3SS	0.25	50	50	ENSMUST00000159736.8	ENSMUSG00000046613.20	Vwa5b2	chr16	protein_coding	von Willebrand factor A domain containing 5B2
chr16	20409031	20409423	+	20409031	20409426	A3SS	0.25	50	50	ENSMUST00000159736.8	ENSMUSG00000046613.20	Vwa5b2	chr16	protein_coding	von Willebrand factor A domain containing 5B2
chr16	20422896	20423088	+	20422896	20422972	A3SS	0.5	50	50	ENSMUST00000096197.11	ENSMUSG00000046613.20	Vwa5b2	chr16	protein_coding	von Willebrand factor A domain containing 5B2
chr16	20409031;20409281	20409105;20409423	+	20409031	20409423	cassetteExon	0.5	100	100	ENSMUST00000162919.8	ENSMUSG00000046613.20	Vwa5b2	chr16	protein_coding	von Willebrand factor A domain containing 5B2
chr16	20409031	20409423	+	20409031	20409220	A3SS&ES	0.25	50	50	ENSMUST00000232279.2	ENSMUSG00000046613.20	Vwa5b2	chr16	protein_coding	von Willebrand factor A domain containing 5B2
chr16	20409031	20409423	+	20409281	20409423	A5SS	0.5	50	50	ENSMUST00000232474.2	ENSMUSG00000046613.20	Vwa5b2	chr16	protein_coding	von Willebrand factor A domain containing 5B2
chr16	20426634	20427492	-	20426634;20427396	20427236;20427492	ES	0.33	50	50	ENSMUST00000231386.2	ENSMUSG00000033809.16	Alg3	chr16	protein_coding	asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase)
chr16	20427639	20429293	-	20427639;20427836	20427737;20429293	ES	0.5	50	50	ENSMUST00000231386.2	ENSMUSG00000033809.16	Alg3	chr16	protein_coding	asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase)
chr16	20427836	20430324	-	20427836	20429293	5pMXE	0.33	50	50	ENSMUST00000231386.2	ENSMUSG00000033809.16	Alg3	chr16	protein_coding	asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase)
chr16	20424467;20425715	20425510;20426514	-	20424467;20425352	20424612;20426514	MXE	0.5	100	100	ENSMUST00000231386.2	ENSMUSG00000033809.16	Alg3	chr16	protein_coding	asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase)
chr16	20425352;20425715	20425510;20426514	-	20425352	20426514	cassetteExon	0.5	100	100	ENSMUST00000231386.2	ENSMUSG00000033809.16	Alg3	chr16	protein_coding	asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase)
chr16	20427639	20429330	-	20427639	20427737	A5SS&ES	0.33	50	50	ENSMUST00000231386.2	ENSMUSG00000033809.16	Alg3	chr16	protein_coding	asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase)
chr16	20427836	20429330	-	20427836	20429293	A5SS	0.33	50	50	ENSMUST00000231386.2	ENSMUSG00000033809.16	Alg3	chr16	protein_coding	asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase)
chr16	20427639	20429330	-	20427639;20427836	20427737;20429330	ES	0.5	50	50	ENSMUST00000231362.2	ENSMUSG00000033809.16	Alg3	chr16	protein_coding	asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase)
chr16	20427836	20430324	-	20427836	20429330	5pMXE	0.33	50	50	ENSMUST00000231362.2	ENSMUSG00000033809.16	Alg3	chr16	protein_coding	asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase)
chr16	20427639	20429293	-	20427639	20427737	A5SS&ES	0.33	50	50	ENSMUST00000231362.2	ENSMUSG00000033809.16	Alg3	chr16	protein_coding	asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase)
chr16	20427639;20427836	20427737;20430324	-	20427639	20430324	cassetteExon	0.5	100	100	ENSMUST00000231531.2	ENSMUSG00000033809.16	Alg3	chr16	protein_coding	asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase)
chr16	20427639	20429293	-	20427639	20430324	A5SS	0.25	50	50	ENSMUST00000231531.2	ENSMUSG00000033809.16	Alg3	chr16	protein_coding	asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase)
chr16	20427639	20429330	-	20427639	20430324	A5SS	0.25	50	50	ENSMUST00000231531.2	ENSMUSG00000033809.16	Alg3	chr16	protein_coding	asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase)
chr16	20427639	20429330	-	20427639	20429293	A5SS	0.25	50	50	ENSMUST00000127454.8	ENSMUSG00000033809.16	Alg3	chr16	protein_coding	asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase)
chr16	20424467;20424756	20424612;20427492	-	20424467;20427396	20425510;20427492	MXE	0.5	100	100	ENSMUST00000232319.2	ENSMUSG00000033809.16	Alg3	chr16	protein_coding	asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase)
chr16	20425352	20425510	-	20424467	20425510	A3SS	0.5	50	50	ENSMUST00000232319.2	ENSMUSG00000033809.16	Alg3	chr16	protein_coding	asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase)
chr16	20425352	20426514	-	20425715	20426514	A3SS&ES	0.5	50	50	ENSMUST00000232319.2	ENSMUSG00000033809.16	Alg3	chr16	protein_coding	asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase)
chr16	20426634	20427492	-	20424756	20427492	A3SS	0.33	50	50	ENSMUST00000231749.2	ENSMUSG00000033809.16	Alg3	chr16	protein_coding	asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase)
chr16	20427396	20427492	-	20424756	20427492	A3SS	0.33	50	50	ENSMUST00000231749.2	ENSMUSG00000033809.16	Alg3	chr16	protein_coding	asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase)
chr16	20424467	20425510	-	20424467	20424612	A5SS&ES	0.5	50	50	ENSMUST00000231749.2	ENSMUSG00000033809.16	Alg3	chr16	protein_coding	asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase)
chr16	20424756	20425276	-	20424756	20427492	A5SS	0.5	50	50	ENSMUST00000231749.2	ENSMUSG00000033809.16	Alg3	chr16	protein_coding	asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase)
chr16	20436659	20449102	+	20436659	20437140	3pMXE	0.33	50	50	ENSMUST00000115522.10	ENSMUSG00000115219.3	Eef1akmt4	chr16	protein_coding	EEF1A lysine methyltransferase 4
chr16	20436659	20449531	+	20436659	20437140	3pMXE	0.33	50	50	ENSMUST00000115522.10	ENSMUSG00000115219.3	Eef1akmt4	chr16	protein_coding	EEF1A lysine methyltransferase 4
chr16	20436659	20449531	+	20436659;20449188	20449102;20449531	ES	0.33	50	50	ENSMUST00000120394.8	ENSMUSG00000115293.3	Gm49333	chr16	protein_coding	predicted gene, 49333
chr16	20463186	20465011	+	20463186	20463810	3pMXE	0.5	50	50	ENSMUST00000120394.8	ENSMUSG00000115293.3	Gm49333	chr16	protein_coding	predicted gene, 49333
chr16	20448797	20449102	+	20436659	20449102	A5SS	0.5	50	50	ENSMUST00000120394.8	ENSMUSG00000115293.3	Gm49333	chr16	protein_coding	predicted gene, 49333
chr16	20448797	20449531	+	20449188	20449531	A5SS&ES	0.33	50	50	ENSMUST00000120394.8	ENSMUSG00000115293.3	Gm49333	chr16	protein_coding	predicted gene, 49333
chr16	20448797	20449847	+	20449660	20449847	A5SS&ES	0.5	50	50	ENSMUST00000120394.8	ENSMUSG00000115293.3	Gm49333	chr16	protein_coding	predicted gene, 49333
chr16	20448797	20449531	+	20436659	20449531	A5SS	0.33	50	50	ENSMUST00000079600.12	ENSMUSG00000115293.3	Gm49333	chr16	protein_coding	predicted gene, 49333
chr16	20448797	20449531	+	20448797;20449188	20449102;20449531	ES	0.5	50	50	ENSMUST00000003898.12	ENSMUSG00000022842.19	Ece2	chr16	protein_coding	endothelin converting enzyme 2
chr16	20448797;20449660	20449531;20449847	+	20448797	20449847	cassetteExon	0.5	100	100	ENSMUST00000152246.8	ENSMUSG00000022842.19	Ece2	chr16	protein_coding	endothelin converting enzyme 2
chr16	20448797	20449102	+	20448797	20449847	A3SS	0.33	50	50	ENSMUST00000152246.8	ENSMUSG00000022842.19	Ece2	chr16	protein_coding	endothelin converting enzyme 2
chr16	20470601	20470902	+	20470601	20470994	A3SS	0.5	50	50	ENSMUST00000007212.9	ENSMUSG00000006998.17	Psmd2	chr16	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 2
chr16	20478530	20478727	+	20478530	20478707	A3SS	0.5	50	50	ENSMUST00000007212.9	ENSMUSG00000006998.17	Psmd2	chr16	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 2
chr16	20478748	20481813	+	20481490	20481813	A5SS&ES	0.5	50	50	ENSMUST00000007212.9	ENSMUSG00000006998.17	Psmd2	chr16	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 2
chr16	20487174;20494270	20494094;20494480	+	20487174	20494480	cassetteExon	0.5	100	100	ENSMUST00000154594.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20497424	20497552	+	20497424	20497634	A3SS	0.5	50	50	ENSMUST00000154594.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20491626	20494480	+	20487174	20494480	A5SS	0.25	50	50	ENSMUST00000154594.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20493064	20494480	+	20487174	20494480	A5SS	0.25	50	50	ENSMUST00000154594.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20493064	20496436	+	20494579	20496436	A5SS&ES	0.5	50	50	ENSMUST00000154594.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20497248	20497332	+	20496548	20497332	A5SS	0.5	50	50	ENSMUST00000154594.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20494270	20494510	+	20494270	20494480	A3SS	0.5	50	50	ENSMUST00000128840.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20491626	20494480	+	20494270	20494480	A5SS&ES	0.25	50	50	ENSMUST00000128840.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20492405	20494094	+	20487174	20494094	A5SS	0.25	50	50	ENSMUST00000128840.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20493064	20494094	+	20487174	20494094	A5SS	0.25	50	50	ENSMUST00000128840.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20493064	20494480	+	20494270	20494480	A5SS&ES	0.25	50	50	ENSMUST00000128840.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20493556	20494094	+	20487174	20494094	A5SS	0.25	50	50	ENSMUST00000128840.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20491626	20492978	+	20491626;20492711	20492618;20492978	ES	0.5	50	50	ENSMUST00000044783.14	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20493064	20494094	+	20493064;20493556	20493536;20494094	ES	0.33	50	50	ENSMUST00000044783.14	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20491626;20492405	20492349;20492618	+	20491626	20492618	cassetteExon	0.5	100	100	ENSMUST00000044783.14	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20491626;20492405	20492349;20494094	+	20491626;20493556	20492618;20494094	MXE	0.5	100	100	ENSMUST00000044783.14	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20492711	20492918	+	20492711	20492978	A3SS	0.5	50	50	ENSMUST00000044783.14	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20500328	20500484	+	20500328	20500487	A3SS	0.5	50	50	ENSMUST00000044783.14	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20502931	20503179	+	20502931	20503158	A3SS	0.5	50	50	ENSMUST00000044783.14	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20493064	20494480	+	20493064;20494270	20494094;20494480	ES	0.33	50	50	ENSMUST00000115463.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20491626;20492405	20492349;20494094	+	20491626;20493064	20492618;20494094	MXE	0.5	100	100	ENSMUST00000115463.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20491626;20493064	20492618;20494480	+	20491626	20494480	cassetteExon	0.5	100	100	ENSMUST00000143939.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20491626;20493064	20492618;20496436	+	20491626;20494579	20494480;20496436	MXE	0.5	100	100	ENSMUST00000143939.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20491626;20493064	20492978;20494480	+	20491626	20494480	cassetteExon	0.5	100	100	ENSMUST00000143939.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20491626;20493064	20492978;20496436	+	20491626;20494579	20494480;20496436	MXE	0.5	100	100	ENSMUST00000143939.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20491626	20492349	+	20491626	20494480	A3SS	0.25	50	50	ENSMUST00000143939.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20491626;20494579	20494480;20496436	+	20491626;20493064	20492349;20496436	MXE	0.5	100	100	ENSMUST00000128594.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20492405;20494579	20494094;20496436	+	20492405;20493064	20492618;20496436	MXE	0.5	100	100	ENSMUST00000128594.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20493064;20494579	20494094;20496436	+	20493064	20496436	cassetteExon	0.5	100	100	ENSMUST00000128594.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20493064;20494579	20494480;20496436	+	20493064	20496436	cassetteExon	0.5	100	100	ENSMUST00000128594.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20493064	20493536	+	20493064	20496436	A3SS	0.25	50	50	ENSMUST00000128594.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20492405;20494270	20494094;20494480	+	20492405;20493064	20492618;20494480	MXE	0.5	100	100	ENSMUST00000150333.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20493064	20493536	+	20493064	20494480	A3SS	0.25	50	50	ENSMUST00000150333.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20493064	20494480	+	20493064	20494094	A3SS&ES	0.25	50	50	ENSMUST00000231618.2	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20491626;20492405	20492349;20494094	+	20491626;20493556	20492978;20494094	MXE	0.5	100	100	ENSMUST00000140576.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20491626;20492711	20492349;20492978	+	20491626	20492978	cassetteExon	0.5	100	100	ENSMUST00000140576.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20491626	20494480	+	20491626	20492978	A3SS&ES	0.25	50	50	ENSMUST00000140576.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20491626	20492978	+	20491626	20492349	A3SS&ES	0.25	50	50	ENSMUST00000115457.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20491626	20492618	+	20492405	20492618	5pMXE	0.5	50	50	ENSMUST00000156226.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20493064	20496436	+	20493064	20494094	A3SS&ES	0.25	50	50	ENSMUST00000156226.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20492405;20493064	20492618;20494094	+	20492405	20494094	cassetteExon	0.5	100	100	ENSMUST00000136713.5	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20493556	20494094	+	20492405	20494094	A5SS	0.25	50	50	ENSMUST00000136713.5	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20491626	20492978	+	20492711	20492978	5pMXE	0.5	50	50	ENSMUST00000115460.8	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20492405	20494094	+	20493064	20494094	5pMXE	0.25	50	50	ENSMUST00000151679.3	ENSMUSG00000045983.17	Eif4g1	chr16	protein_coding	eukaryotic translation initiation factor 4, gamma 1
chr16	20512222;20513579	20513518;20517672	+	20512222	20517672	cassetteExon	0.5	100	100	ENSMUST00000149543.9	ENSMUSG00000050821.15	Fam131a	chr16	protein_coding	family with sequence similarity 131, member A
chr16	20514631	20517672	+	20512222	20517672	A5SS	0.25	50	50	ENSMUST00000149543.9	ENSMUSG00000050821.15	Fam131a	chr16	protein_coding	family with sequence similarity 131, member A
chr16	20515097	20517672	+	20512222	20517672	A5SS	0.25	50	50	ENSMUST00000149543.9	ENSMUSG00000050821.15	Fam131a	chr16	protein_coding	family with sequence similarity 131, member A
chr16	20513579	20517672	+	20513579;20514631	20514489;20517672	ES	0.25	50	50	ENSMUST00000232207.2	ENSMUSG00000050821.15	Fam131a	chr16	protein_coding	family with sequence similarity 131, member A
chr16	20513927	20514489	+	20513579	20514489	A5SS	0.5	50	50	ENSMUST00000232207.2	ENSMUSG00000050821.15	Fam131a	chr16	protein_coding	family with sequence similarity 131, member A
chr16	20515097	20517672	+	20514631	20517672	A5SS	0.25	50	50	ENSMUST00000232207.2	ENSMUSG00000050821.15	Fam131a	chr16	protein_coding	family with sequence similarity 131, member A
chr16	20515097	20517672	+	20513579	20517672	A5SS	0.25	50	50	ENSMUST00000118919.9	ENSMUSG00000050821.15	Fam131a	chr16	protein_coding	family with sequence similarity 131, member A
chr16	20526207	20526593	-	20526207;20526382	20526323;20526593	ES	0.5	50	50	ENSMUST00000007207.15	ENSMUSG00000022843.18	Clcn2	chr16	protein_coding	chloride channel, voltage-sensitive 2
chr16	20531758	20532363	-	20531758;20532209	20532078;20532363	ES	0.5	50	50	ENSMUST00000007207.15	ENSMUSG00000022843.18	Clcn2	chr16	protein_coding	chloride channel, voltage-sensitive 2
chr16	20524466	20525924	-	20522391	20525924	A3SS	0.5	50	50	ENSMUST00000007207.15	ENSMUSG00000022843.18	Clcn2	chr16	protein_coding	chloride channel, voltage-sensitive 2
chr16	20528379	20528630	-	20528430	20528630	A3SS	0.33	50	50	ENSMUST00000007207.15	ENSMUSG00000022843.18	Clcn2	chr16	protein_coding	chloride channel, voltage-sensitive 2
chr16	20528474	20528630	-	20528430	20528630	A3SS	0.33	50	50	ENSMUST00000007207.15	ENSMUSG00000022843.18	Clcn2	chr16	protein_coding	chloride channel, voltage-sensitive 2
chr16	20527517	20527827	-	20527517	20527852	A5SS	0.5	50	50	ENSMUST00000007207.15	ENSMUSG00000022843.18	Clcn2	chr16	protein_coding	chloride channel, voltage-sensitive 2
chr16	20529389	20530484	-	20529389	20530440	A5SS	0.5	50	50	ENSMUST00000007207.15	ENSMUSG00000022843.18	Clcn2	chr16	protein_coding	chloride channel, voltage-sensitive 2
chr16	20531758	20532363	-	20532209	20532363	A3SS	0.5	50	50	ENSMUST00000148131.8	ENSMUSG00000022843.18	Clcn2	chr16	protein_coding	chloride channel, voltage-sensitive 2
chr16	20526207	20526593	-	20526207	20526323	A5SS	0.5	50	50	ENSMUST00000153075.8	ENSMUSG00000022843.18	Clcn2	chr16	protein_coding	chloride channel, voltage-sensitive 2
chr16	20528474	20528630	-	20528379	20528630	A3SS	0.33	50	50	ENSMUST00000120099.8	ENSMUSG00000022843.18	Clcn2	chr16	protein_coding	chloride channel, voltage-sensitive 2
chr16	20537657	20539269	+	20537657;20537834	20537741;20539269	ES	0.5	50	50	ENSMUST00000021405.8	ENSMUSG00000021018.9	Polr2h	chr16	protein_coding	polymerase (RNA) II (DNA directed) polypeptide H
chr16	20536916	20537574	+	20536744	20537574	A5SS	0.33	50	50	ENSMUST00000021405.8	ENSMUSG00000021018.9	Polr2h	chr16	protein_coding	polymerase (RNA) II (DNA directed) polypeptide H
chr16	20537419	20537574	+	20536744	20537574	A5SS	0.33	50	50	ENSMUST00000021405.8	ENSMUSG00000021018.9	Polr2h	chr16	protein_coding	polymerase (RNA) II (DNA directed) polypeptide H
chr16	20537419	20537574	+	20536916	20537574	A5SS	0.33	50	50	ENSMUST00000231392.2	ENSMUSG00000021018.9	Polr2h	chr16	protein_coding	polymerase (RNA) II (DNA directed) polypeptide H
chr16	20544635	20545056	-	20544832	20545056	A3SS	0.5	50	50	ENSMUST00000115437.4	ENSMUSG00000022847.16	Thpo	chr16	protein_coding	thrombopoietin
chr16	20547683	20547814	-	20547596	20547814	A3SS	0.5	50	50	ENSMUST00000115437.4	ENSMUSG00000022847.16	Thpo	chr16	protein_coding	thrombopoietin
chr16	20547967	20549253	-	20547967	20553012	A5SS	0.5	50	50	ENSMUST00000115437.4	ENSMUSG00000022847.16	Thpo	chr16	protein_coding	thrombopoietin
chr16	20552384	20553023	+	20552384;20552886	20552757;20553023	ES	0.5	50	50	ENSMUST00000115423.8	ENSMUSG00000006958.15	Chrd	chr16	protein_coding	chordin
chr16	20553523;20553712	20553612;20553867	+	20553523	20553867	cassetteExon	0.5	100	100	ENSMUST00000115423.8	ENSMUSG00000006958.15	Chrd	chr16	protein_coding	chordin
chr16	20553523;20553719	20553612;20553867	+	20553523	20553867	cassetteExon	0.5	100	100	ENSMUST00000115423.8	ENSMUSG00000006958.15	Chrd	chr16	protein_coding	chordin
chr16	20553523;20553712	20553656;20553867	+	20553523	20553867	cassetteExon	0.5	100	100	ENSMUST00000115423.8	ENSMUSG00000006958.15	Chrd	chr16	protein_coding	chordin
chr16	20553523;20553719	20553656;20553867	+	20553523	20553867	cassetteExon	0.5	100	100	ENSMUST00000115423.8	ENSMUSG00000006958.15	Chrd	chr16	protein_coding	chordin
chr16	20552045	20552215	+	20552045	20552281	A3SS	0.5	50	50	ENSMUST00000115423.8	ENSMUSG00000006958.15	Chrd	chr16	protein_coding	chordin
chr16	20555192	20555659	+	20555133	20555659	A5SS	0.5	50	50	ENSMUST00000115423.8	ENSMUSG00000006958.15	Chrd	chr16	protein_coding	chordin
chr16	20557566	20557861	+	20557566;20557747	20557654;20557861	ES	0.5	50	50	ENSMUST00000007171.13	ENSMUSG00000006958.15	Chrd	chr16	protein_coding	chordin
chr16	20553523	20553656	+	20553523	20553612	A3SS	0.33	50	50	ENSMUST00000153299.8	ENSMUSG00000006958.15	Chrd	chr16	protein_coding	chordin
chr16	20553719	20553867	+	20553712	20553867	A5SS	0.33	50	50	ENSMUST00000153299.8	ENSMUSG00000006958.15	Chrd	chr16	protein_coding	chordin
chr16	21029360	21031640	+	21024013	21031640	A5SS	0.33	50	50	ENSMUST00000006112.7	ENSMUSG00000005958.16	Ephb3	chr16	protein_coding	Eph receptor B3
chr16	21031374	21031640	+	21024013	21031640	A5SS	0.33	50	50	ENSMUST00000006112.7	ENSMUSG00000005958.16	Ephb3	chr16	protein_coding	Eph receptor B3
chr16	21031374	21031640	+	21029360	21031640	A5SS	0.33	50	50	ENSMUST00000232407.2	ENSMUSG00000005958.16	Ephb3	chr16	protein_coding	Eph receptor B3
chr16	21350112	21351813	+	21350112;21351117	21351033;21351813	ES	0.5	50	50	ENSMUST00000096191.11	ENSMUSG00000033653.19	Vps8	chr16	protein_coding	VPS8 CORVET complex subunit
chr16	21351911	21362018	+	21351911;21358858	21358769;21362018	ES	0.5	50	50	ENSMUST00000096191.11	ENSMUSG00000033653.19	Vps8	chr16	protein_coding	VPS8 CORVET complex subunit
chr16	21395544	21400283	+	21395544	21397211	3pMXE	0.5	50	50	ENSMUST00000096191.11	ENSMUSG00000033653.19	Vps8	chr16	protein_coding	VPS8 CORVET complex subunit
chr16	21267153;21270111	21270106;21274979	+	21267153	21274979	cassetteExon	0.5	100	100	ENSMUST00000096191.11	ENSMUSG00000033653.19	Vps8	chr16	protein_coding	VPS8 CORVET complex subunit
chr16	21362064;21364023	21363921;21372825	+	21362064	21372825	cassetteExon	0.5	100	100	ENSMUST00000096191.11	ENSMUSG00000033653.19	Vps8	chr16	protein_coding	VPS8 CORVET complex subunit
chr16	21241975	21253490	+	21241975	21253437	A3SS	0.5	50	50	ENSMUST00000096191.11	ENSMUSG00000033653.19	Vps8	chr16	protein_coding	VPS8 CORVET complex subunit
chr16	21267153	21274973	+	21267153	21274979	A3SS	0.33	50	50	ENSMUST00000096191.11	ENSMUSG00000033653.19	Vps8	chr16	protein_coding	VPS8 CORVET complex subunit
chr16	21378173	21378950	+	21378173	21378948	A3SS	0.5	50	50	ENSMUST00000096191.11	ENSMUSG00000033653.19	Vps8	chr16	protein_coding	VPS8 CORVET complex subunit
chr16	21242195	21253437	+	21241975	21253437	A5SS	0.5	50	50	ENSMUST00000096191.11	ENSMUSG00000033653.19	Vps8	chr16	protein_coding	VPS8 CORVET complex subunit
chr16	21327893	21330269	+	21325571	21330269	A5SS	0.5	50	50	ENSMUST00000096191.11	ENSMUSG00000033653.19	Vps8	chr16	protein_coding	VPS8 CORVET complex subunit
chr16	21400448	21459429	+	21400448;21426971	21426918;21459429	ES	0.33	50	50	ENSMUST00000115397.8	ENSMUSG00000033653.19	Vps8	chr16	protein_coding	VPS8 CORVET complex subunit
chr16	21459509	21459765	+	21459509	21462871	A3SS	0.5	50	50	ENSMUST00000115397.8	ENSMUSG00000033653.19	Vps8	chr16	protein_coding	VPS8 CORVET complex subunit
chr16	21421769	21426918	+	21400448	21426918	A5SS	0.33	50	50	ENSMUST00000115397.8	ENSMUSG00000033653.19	Vps8	chr16	protein_coding	VPS8 CORVET complex subunit
chr16	21426736	21426918	+	21400448	21426918	A5SS	0.33	50	50	ENSMUST00000115397.8	ENSMUSG00000033653.19	Vps8	chr16	protein_coding	VPS8 CORVET complex subunit
chr16	21446725	21459429	+	21426971	21459429	A5SS	0.33	50	50	ENSMUST00000115397.8	ENSMUSG00000033653.19	Vps8	chr16	protein_coding	VPS8 CORVET complex subunit
chr16	21267153	21270106	+	21267153	21274973	A3SS	0.33	50	50	ENSMUST00000096192.12	ENSMUSG00000033653.19	Vps8	chr16	protein_coding	VPS8 CORVET complex subunit
chr16	21446725	21459429	+	21400448	21459429	A5SS	0.33	50	50	ENSMUST00000125487.8	ENSMUSG00000033653.19	Vps8	chr16	protein_coding	VPS8 CORVET complex subunit
chr16	21426736	21426918	+	21421769	21426918	A5SS	0.33	50	50	ENSMUST00000231224.2	ENSMUSG00000033653.19	Vps8	chr16	protein_coding	VPS8 CORVET complex subunit
chr16	21496192	21512966	-	21472508	21512966	A3SS	0.33	50	50	ENSMUST00000053336.8	ENSMUSG00000043391.11	2510009E07Rik	chr16	protein_coding	RIKEN cDNA 2510009E07 gene
chr16	21508991	21512966	-	21472508	21512966	A3SS	0.33	50	50	ENSMUST00000053336.8	ENSMUSG00000043391.11	2510009E07Rik	chr16	protein_coding	RIKEN cDNA 2510009E07 gene
chr16	21472508	21511915	-	21472508	21512966	A5SS	0.5	50	50	ENSMUST00000053336.8	ENSMUSG00000043391.11	2510009E07Rik	chr16	protein_coding	RIKEN cDNA 2510009E07 gene
chr16	21508991	21512966	-	21496192	21512966	A3SS	0.33	50	50	ENSMUST00000231592.2	ENSMUSG00000043391.11	2510009E07Rik	chr16	protein_coding	RIKEN cDNA 2510009E07 gene
chr16	21614725	21627428	+	21614725;21625869	21625721;21627428	ES	0.33	50	50	ENSMUST00000211443.2	ENSMUSG00000097290.10	1300002E11Rik	chr16	lncRNA	RIKEN cDNA 1300002E11 gene
chr16	21614725	21619465	+	21614725	21625721	A3SS	0.25	50	50	ENSMUST00000211443.2	ENSMUSG00000097290.10	1300002E11Rik	chr16	lncRNA	RIKEN cDNA 1300002E11 gene
chr16	21614725	21619525	+	21614725	21625721	A3SS	0.25	50	50	ENSMUST00000211443.2	ENSMUSG00000097290.10	1300002E11Rik	chr16	lncRNA	RIKEN cDNA 1300002E11 gene
chr16	21621847	21627428	+	21625869	21627428	A5SS&ES	0.33	50	50	ENSMUST00000211443.2	ENSMUSG00000097290.10	1300002E11Rik	chr16	lncRNA	RIKEN cDNA 1300002E11 gene
chr16	21614725	21627428	+	21614725	21619465	3pMXE	0.2	50	50	ENSMUST00000231300.2	ENSMUSG00000097290.10	1300002E11Rik	chr16	lncRNA	RIKEN cDNA 1300002E11 gene
chr16	21614725	21710634	+	21614725	21619465	3pMXE	0.2	50	50	ENSMUST00000231300.2	ENSMUSG00000097290.10	1300002E11Rik	chr16	lncRNA	RIKEN cDNA 1300002E11 gene
chr16	21614725	21619525	+	21614725	21619465	A3SS	0.2	50	50	ENSMUST00000231300.2	ENSMUSG00000097290.10	1300002E11Rik	chr16	lncRNA	RIKEN cDNA 1300002E11 gene
chr16	21614725	21710634	+	21614725	21627428	3pMXE	0.2	50	50	ENSMUST00000209449.2	ENSMUSG00000097290.10	1300002E11Rik	chr16	lncRNA	RIKEN cDNA 1300002E11 gene
chr16	21614725	21619525	+	21614725	21627428	A3SS	0.2	50	50	ENSMUST00000209449.2	ENSMUSG00000097290.10	1300002E11Rik	chr16	lncRNA	RIKEN cDNA 1300002E11 gene
chr16	21621847	21627428	+	21614725	21627428	A5SS	0.33	50	50	ENSMUST00000209449.2	ENSMUSG00000097290.10	1300002E11Rik	chr16	lncRNA	RIKEN cDNA 1300002E11 gene
chr16	21620106	21621705	+	21620106	21621703	A3SS	0.5	50	50	ENSMUST00000181780.9	ENSMUSG00000097290.10	1300002E11Rik	chr16	lncRNA	RIKEN cDNA 1300002E11 gene
chr16	21614725;21625869	21625721;21627428	+	21614725;21621847	21619465;21627428	MXE	0.5	100	100	ENSMUST00000209728.2	ENSMUSG00000097290.10	1300002E11Rik	chr16	lncRNA	RIKEN cDNA 1300002E11 gene
chr16	21619586	21624062	+	21619586	21620031	A3SS&ES	0.5	50	50	ENSMUST00000209728.2	ENSMUSG00000097290.10	1300002E11Rik	chr16	lncRNA	RIKEN cDNA 1300002E11 gene
chr16	21614725	21619525	+	21614725	21710634	A3SS	0.2	50	50	ENSMUST00000231988.2	ENSMUSG00000033618.8	Map3k13	chr16	protein_coding	mitogen-activated protein kinase kinase kinase 13
chr16	21614725	21625721	+	21614725	21710634	A3SS	0.2	50	50	ENSMUST00000231988.2	ENSMUSG00000033618.8	Map3k13	chr16	protein_coding	mitogen-activated protein kinase kinase kinase 13
chr16	21644822	21710634	+	21614725	21710634	A5SS	0.5	50	50	ENSMUST00000231988.2	ENSMUSG00000033618.8	Map3k13	chr16	protein_coding	mitogen-activated protein kinase kinase kinase 13
chr16	21756844	21766118	-	21756844;21764904	21764751;21766118	ES	0.5	50	50	ENSMUST00000023562.9	ENSMUSG00000022856.10	Tmem41a	chr16	protein_coding	transmembrane protein 41a
chr16	21786902	21794983	-	21786902;21792897	21792808;21794983	ES	0.33	50	50	ENSMUST00000060673.8	ENSMUSG00000044626.14	Liph	chr16	protein_coding	lipase, member H
chr16	21792891	21794983	-	21792897	21794983	A3SS	0.33	50	50	ENSMUST00000060673.8	ENSMUSG00000044626.14	Liph	chr16	protein_coding	lipase, member H
chr16	21800194	21802592	-	21800194	21802651	A5SS	0.5	50	50	ENSMUST00000060673.8	ENSMUSG00000044626.14	Liph	chr16	protein_coding	lipase, member H
chr16	21786902;21792891	21792808;21794983	-	21786902	21794983	cassetteExon	0.5	100	100	ENSMUST00000074230.12	ENSMUSG00000044626.14	Liph	chr16	protein_coding	lipase, member H
chr16	21828492	21832874	+	21828492;21830302	21830244;21832874	ES	0.33	50	50	ENSMUST00000023561.8	ENSMUSG00000022855.10	Senp2	chr16	protein_coding	SUMO/sentrin specific peptidase 2
chr16	21833007	21837087	+	21833007;21835015	21834949;21837087	ES	0.5	50	50	ENSMUST00000023561.8	ENSMUSG00000022855.10	Senp2	chr16	protein_coding	SUMO/sentrin specific peptidase 2
chr16	21850914	21854283	+	21850914	21855220	A3SS	0.5	50	50	ENSMUST00000023561.8	ENSMUSG00000022855.10	Senp2	chr16	protein_coding	SUMO/sentrin specific peptidase 2
chr16	21828714	21830244	+	21828492	21830244	A5SS	0.5	50	50	ENSMUST00000023561.8	ENSMUSG00000022855.10	Senp2	chr16	protein_coding	SUMO/sentrin specific peptidase 2
chr16	21830369	21832874	+	21830302	21832874	A5SS	0.33	50	50	ENSMUST00000023561.8	ENSMUSG00000022855.10	Senp2	chr16	protein_coding	SUMO/sentrin specific peptidase 2
chr16	21828492	21832874	+	21828492;21830369	21830244;21832874	ES	0.33	50	50	ENSMUST00000231724.2	ENSMUSG00000022855.10	Senp2	chr16	protein_coding	SUMO/sentrin specific peptidase 2
chr16	21828714	21830244	+	21828714	21829123	3pMXE	0.5	50	50	ENSMUST00000231632.2	ENSMUSG00000022855.10	Senp2	chr16	protein_coding	SUMO/sentrin specific peptidase 2
chr16	21970754	21979996	-	21907860	21979996	A3SS	0.5	50	50	ENSMUST00000100052.11	ENSMUSG00000033581.18	Igf2bp2	chr16	protein_coding	insulin-like growth factor 2 mRNA binding protein 2
chr16	21907860	21920627	-	21907860	21979996	A5SS	0.25	50	50	ENSMUST00000100052.11	ENSMUSG00000033581.18	Igf2bp2	chr16	protein_coding	insulin-like growth factor 2 mRNA binding protein 2
chr16	21907860	21938978	-	21907860	21979996	A5SS	0.25	50	50	ENSMUST00000100052.11	ENSMUSG00000033581.18	Igf2bp2	chr16	protein_coding	insulin-like growth factor 2 mRNA binding protein 2
chr16	21907860	21939947	-	21907860	21979996	A5SS	0.25	50	50	ENSMUST00000100052.11	ENSMUSG00000033581.18	Igf2bp2	chr16	protein_coding	insulin-like growth factor 2 mRNA binding protein 2
chr16	21907860;21939170	21938978;21939947	-	21907860	21939947	cassetteExon	0.5	100	100	ENSMUST00000231926.2	ENSMUSG00000033581.18	Igf2bp2	chr16	protein_coding	insulin-like growth factor 2 mRNA binding protein 2
chr16	21907860	21920627	-	21907860	21939947	A5SS	0.25	50	50	ENSMUST00000231926.2	ENSMUSG00000033581.18	Igf2bp2	chr16	protein_coding	insulin-like growth factor 2 mRNA binding protein 2
chr16	21907860	21938978	-	21907860	21920627	A5SS&ES	0.33	50	50	ENSMUST00000151087.2	ENSMUSG00000033581.18	Igf2bp2	chr16	protein_coding	insulin-like growth factor 2 mRNA binding protein 2
chr16	22073867;22078011	22077615;22084491	-	22073867	22084491	cassetteExon	0.5	100	100	ENSMUST00000161286.8	ENSMUSG00000022858.17	Tra2b	chr16	protein_coding	transformer 2 beta
chr16	22073867;22078011	22077736;22084491	-	22073867	22084491	cassetteExon	0.5	100	100	ENSMUST00000161286.8	ENSMUSG00000022858.17	Tra2b	chr16	protein_coding	transformer 2 beta
chr16	22076978	22077736	-	22073867	22077736	A3SS	0.5	50	50	ENSMUST00000162413.9	ENSMUSG00000022858.17	Tra2b	chr16	protein_coding	transformer 2 beta
chr16	22073867	22077615	-	22073867	22077736	A5SS	0.33	50	50	ENSMUST00000162413.9	ENSMUSG00000022858.17	Tra2b	chr16	protein_coding	transformer 2 beta
chr16	22073867	22084491	-	22073867	22077615	5pMXE	0.33	50	50	ENSMUST00000159946.2	ENSMUSG00000022858.17	Tra2b	chr16	protein_coding	transformer 2 beta
chr16	22073867	22084491	-	22078011	22084491	3pMXE	0.5	50	50	ENSMUST00000160579.2	ENSMUSG00000022858.17	Tra2b	chr16	protein_coding	transformer 2 beta
chr16	22231724;22240622	22240569;22254627	-	22231724	22254627	cassetteExon	0.5	100	100	ENSMUST00000079601.13	ENSMUSG00000013089.16	Etv5	chr16	protein_coding	ets variant 5
chr16	22255310;22256095	22256022;22258267	-	22255310	22258267	cassetteExon	0.5	100	100	ENSMUST00000079601.13	ENSMUSG00000013089.16	Etv5	chr16	protein_coding	ets variant 5
chr16	22205608;22211805	22211405;22218070	-	22205608	22218070	cassetteExon	0.5	100	100	ENSMUST00000170803.2	ENSMUSG00000013089.16	Etv5	chr16	protein_coding	ets variant 5
chr16	22254677;22255038	22254770;22255188	-	22254677	22255188	cassetteExon	0.5	100	100	ENSMUST00000165506.2	ENSMUSG00000013089.16	Etv5	chr16	protein_coding	ets variant 5
chr16	22231724	22254627	-	22220681	22254627	A3SS	0.33	50	50	ENSMUST00000165506.2	ENSMUSG00000013089.16	Etv5	chr16	protein_coding	ets variant 5
chr16	22240622	22254627	-	22220681	22254627	A3SS	0.33	50	50	ENSMUST00000165506.2	ENSMUSG00000013089.16	Etv5	chr16	protein_coding	ets variant 5
chr16	22220681	22230383	-	22220681	22254627	A5SS	0.5	50	50	ENSMUST00000165506.2	ENSMUSG00000013089.16	Etv5	chr16	protein_coding	ets variant 5
chr16	22390513	22394062	-	22390513;22391466	22391350;22394062	ES	0.5	50	50	ENSMUST00000089925.10	ENSMUSG00000022861.18	Dgkg	chr16	protein_coding	diacylglycerol kinase, gamma
chr16	22415935	22418584	-	22407219	22418584	A3SS	0.5	50	50	ENSMUST00000089925.10	ENSMUSG00000022861.18	Dgkg	chr16	protein_coding	diacylglycerol kinase, gamma
chr16	22391466	22393809	-	22391466	22394062	A5SS	0.5	50	50	ENSMUST00000089925.10	ENSMUSG00000022861.18	Dgkg	chr16	protein_coding	diacylglycerol kinase, gamma
chr16	22390513	22394062	-	22390513	22391350	A5SS&ES	0.5	50	50	ENSMUST00000137311.2	ENSMUSG00000022861.18	Dgkg	chr16	protein_coding	diacylglycerol kinase, gamma
chr16	22632706;22633634	22633558;22637131	-	22632706	22637131	cassetteExon	0.5	100	100	ENSMUST00000004576.8	ENSMUSG00000004462.8	Tbccd1	chr16	protein_coding	TBCC domain containing 1
chr16	22641639;22642197	22642117;22644516	-	22641639	22644516	cassetteExon	0.5	100	100	ENSMUST00000004576.8	ENSMUSG00000004462.8	Tbccd1	chr16	protein_coding	TBCC domain containing 1
chr16	22658000	22660479	-	22652783	22660479	A3SS	0.5	50	50	ENSMUST00000004576.8	ENSMUSG00000004462.8	Tbccd1	chr16	protein_coding	TBCC domain containing 1
chr16	22660857	22663113	-	22660857	22676095	A5SS	0.25	50	50	ENSMUST00000004576.8	ENSMUSG00000004462.8	Tbccd1	chr16	protein_coding	TBCC domain containing 1
chr16	22660857	22675505	-	22660857	22676095	A5SS	0.25	50	50	ENSMUST00000004576.8	ENSMUSG00000004462.8	Tbccd1	chr16	protein_coding	TBCC domain containing 1
chr16	22660857	22676245	-	22660857	22676095	A5SS	0.25	50	50	ENSMUST00000004576.8	ENSMUSG00000004462.8	Tbccd1	chr16	protein_coding	TBCC domain containing 1
chr16	22660857	22663113	-	22660857	22676245	A5SS	0.25	50	50	ENSMUST00000232075.2	ENSMUSG00000004462.8	Tbccd1	chr16	protein_coding	TBCC domain containing 1
chr16	22660857	22675505	-	22660857	22676245	A5SS	0.25	50	50	ENSMUST00000232075.2	ENSMUSG00000004462.8	Tbccd1	chr16	protein_coding	TBCC domain containing 1
chr16	22641639	22644516	-	22637278	22644516	A3SS	0.33	50	50	ENSMUST00000232555.2	ENSMUSG00000004462.8	Tbccd1	chr16	protein_coding	TBCC domain containing 1
chr16	22642197	22644516	-	22637278	22644516	A3SS	0.33	50	50	ENSMUST00000232555.2	ENSMUSG00000004462.8	Tbccd1	chr16	protein_coding	TBCC domain containing 1
chr16	22637278	22640832	-	22637278	22644516	A5SS	0.5	50	50	ENSMUST00000232555.2	ENSMUSG00000004462.8	Tbccd1	chr16	protein_coding	TBCC domain containing 1
chr16	22660857	22663113	-	22660857	22675505	A5SS	0.25	50	50	ENSMUST00000232251.2	ENSMUSG00000004462.8	Tbccd1	chr16	protein_coding	TBCC domain containing 1
chr16	22690513	22697153	+	22690513	22690890	3pMXE	0.5	50	50	ENSMUST00000178320.2	ENSMUSG00000004460.18	Dnajb11	chr16	protein_coding	DnaJ heat shock protein family (Hsp40) member B11
chr16	22713185	22713944	+	22713185;22713629	22713545;22713944	ES	0.5	50	50	ENSMUST00000231848.2	ENSMUSG00000022868.7	Ahsg	chr16	protein_coding	alpha-2-HS-glycoprotein
chr16	22715359	22717917	+	22715359	22716878	A3SS&ES	0.5	50	50	ENSMUST00000231848.2	ENSMUSG00000022868.7	Ahsg	chr16	protein_coding	alpha-2-HS-glycoprotein
chr16	22710240	22713075	+	22710219	22713075	A5SS	0.2	50	50	ENSMUST00000231848.2	ENSMUSG00000022868.7	Ahsg	chr16	protein_coding	alpha-2-HS-glycoprotein
chr16	22710928	22713075	+	22710219	22713075	A5SS	0.2	50	50	ENSMUST00000231848.2	ENSMUSG00000022868.7	Ahsg	chr16	protein_coding	alpha-2-HS-glycoprotein
chr16	22711077	22713075	+	22710219	22713075	A5SS	0.2	50	50	ENSMUST00000231848.2	ENSMUSG00000022868.7	Ahsg	chr16	protein_coding	alpha-2-HS-glycoprotein
chr16	22711299	22713075	+	22710219	22713075	A5SS	0.2	50	50	ENSMUST00000231848.2	ENSMUSG00000022868.7	Ahsg	chr16	protein_coding	alpha-2-HS-glycoprotein
chr16	22710928	22713075	+	22710240	22713075	A5SS	0.2	50	50	ENSMUST00000231328.2	ENSMUSG00000022868.7	Ahsg	chr16	protein_coding	alpha-2-HS-glycoprotein
chr16	22711077	22713075	+	22710240	22713075	A5SS	0.2	50	50	ENSMUST00000231328.2	ENSMUSG00000022868.7	Ahsg	chr16	protein_coding	alpha-2-HS-glycoprotein
chr16	22711299	22713075	+	22710240	22713075	A5SS	0.2	50	50	ENSMUST00000231328.2	ENSMUSG00000022868.7	Ahsg	chr16	protein_coding	alpha-2-HS-glycoprotein
chr16	22710928	22713075	+	22711077	22713075	A5SS	0.2	50	50	ENSMUST00000023583.7	ENSMUSG00000022868.7	Ahsg	chr16	protein_coding	alpha-2-HS-glycoprotein
chr16	22711299	22713075	+	22711077	22713075	A5SS	0.2	50	50	ENSMUST00000023583.7	ENSMUSG00000022868.7	Ahsg	chr16	protein_coding	alpha-2-HS-glycoprotein
chr16	22711299	22713075	+	22710928	22713075	A5SS	0.2	50	50	ENSMUST00000232098.2	ENSMUSG00000022868.7	Ahsg	chr16	protein_coding	alpha-2-HS-glycoprotein
chr16	22713185	22713944	+	22713629	22713944	5pMXE	0.5	50	50	ENSMUST00000232674.2	ENSMUSG00000022868.7	Ahsg	chr16	protein_coding	alpha-2-HS-glycoprotein
chr16	22737344	22748383	+	22737344;22748059	22747825;22748383	ES	0.33	50	50	ENSMUST00000231768.2	ENSMUSG00000022871.14	Fetub	chr16	protein_coding	fetuin beta
chr16	22737340	22747825	+	22737344	22747825	A5SS	0.25	50	50	ENSMUST00000231768.2	ENSMUSG00000022871.14	Fetub	chr16	protein_coding	fetuin beta
chr16	22739245	22747825	+	22737344	22747825	A5SS	0.25	50	50	ENSMUST00000231768.2	ENSMUSG00000022871.14	Fetub	chr16	protein_coding	fetuin beta
chr16	22739245	22748383	+	22748059	22748383	A5SS&ES	0.33	50	50	ENSMUST00000231768.2	ENSMUSG00000022871.14	Fetub	chr16	protein_coding	fetuin beta
chr16	22740625	22747825	+	22737344	22747825	A5SS	0.25	50	50	ENSMUST00000231768.2	ENSMUSG00000022871.14	Fetub	chr16	protein_coding	fetuin beta
chr16	22737344	22748383	+	22748059	22748383	A5SS&ES	0.33	50	50	ENSMUST00000170805.9	ENSMUSG00000022871.14	Fetub	chr16	protein_coding	fetuin beta
chr16	22739245	22747825	+	22737340	22747825	A5SS	0.25	50	50	ENSMUST00000170805.9	ENSMUSG00000022871.14	Fetub	chr16	protein_coding	fetuin beta
chr16	22740625	22747825	+	22737340	22747825	A5SS	0.25	50	50	ENSMUST00000170805.9	ENSMUSG00000022871.14	Fetub	chr16	protein_coding	fetuin beta
chr16	22739245	22748383	+	22737344	22748383	A5SS	0.33	50	50	ENSMUST00000231880.2	ENSMUSG00000022871.14	Fetub	chr16	protein_coding	fetuin beta
chr16	22739245	22748383	+	22739245;22748059	22747825;22748383	ES	0.5	50	50	ENSMUST00000023587.12	ENSMUSG00000022871.14	Fetub	chr16	protein_coding	fetuin beta
chr16	22739245;22740625	22740499;22747825	+	22739245	22747825	cassetteExon	0.5	100	100	ENSMUST00000023587.12	ENSMUSG00000022871.14	Fetub	chr16	protein_coding	fetuin beta
chr16	22739245	22740499	+	22739245	22748383	A3SS	0.33	50	50	ENSMUST00000116625.10	ENSMUSG00000022871.14	Fetub	chr16	protein_coding	fetuin beta
chr16	22739245	22747825	+	22740625	22747825	5pMXE	0.25	50	50	ENSMUST00000167399.2	ENSMUSG00000022871.14	Fetub	chr16	protein_coding	fetuin beta
chr16	22774956	22775692	+	22774956	22776217	A3SS	0.5	50	50	ENSMUST00000023590.9	ENSMUSG00000022877.10	Hrg	chr16	protein_coding	histidine-rich glycoprotein
chr16	22815859	22818564	-	22815859;22816068	22815961;22818564	ES	0.5	50	50	ENSMUST00000115349.9	ENSMUSG00000060459.15	Kng2	chr16	protein_coding	kininogen 2
chr16	22843671;22845466	22845372;22845798	-	22843671	22845798	cassetteExon	0.5	100	100	ENSMUST00000115349.9	ENSMUSG00000060459.15	Kng2	chr16	protein_coding	kininogen 2
chr16	22806375	22806995	-	22804818	22806995	A3SS	0.5	50	50	ENSMUST00000115349.9	ENSMUSG00000060459.15	Kng2	chr16	protein_coding	kininogen 2
chr16	22822789	22830797	-	22822789	22830747	A5SS	0.5	50	50	ENSMUST00000115349.9	ENSMUSG00000060459.15	Kng2	chr16	protein_coding	kininogen 2
chr16	22897801	22898345	+	22897801	22900228	A3SS	0.5	50	50	ENSMUST00000039492.14	ENSMUSG00000022875.19	Kng1	chr16	protein_coding	kininogen 1
chr16	22927601	22928735	+	22927601;22928009	22927870;22928735	ES	0.5	50	50	ENSMUST00000023599.13	ENSMUSG00000022884.17	Eif4a2	chr16	protein_coding	eukaryotic translation initiation factor 4A2
chr16	22930646;22931207	22931101;22931917	+	22930646	22931917	cassetteExon	0.5	100	100	ENSMUST00000023599.13	ENSMUSG00000022884.17	Eif4a2	chr16	protein_coding	eukaryotic translation initiation factor 4A2
chr16	22926570	22927335	+	22926570	22927338	A3SS	0.5	50	50	ENSMUST00000023599.13	ENSMUSG00000022884.17	Eif4a2	chr16	protein_coding	eukaryotic translation initiation factor 4A2
chr16	22926630	22927338	+	22926570	22927338	A5SS	0.33	50	50	ENSMUST00000023599.13	ENSMUSG00000022884.17	Eif4a2	chr16	protein_coding	eukaryotic translation initiation factor 4A2
chr16	22926720	22927338	+	22926570	22927338	A5SS	0.33	50	50	ENSMUST00000023599.13	ENSMUSG00000022884.17	Eif4a2	chr16	protein_coding	eukaryotic translation initiation factor 4A2
chr16	22927601	22928735	+	22927601	22927870	3pMXE	0.5	50	50	ENSMUST00000130775.8	ENSMUSG00000022884.17	Eif4a2	chr16	protein_coding	eukaryotic translation initiation factor 4A2
chr16	22926720	22927338	+	22926630	22927338	A5SS	0.33	50	50	ENSMUST00000130775.8	ENSMUSG00000022884.17	Eif4a2	chr16	protein_coding	eukaryotic translation initiation factor 4A2
chr16	22930646	22931917	+	22930646	22931101	A3SS	0.5	50	50	ENSMUST00000077605.12	ENSMUSG00000022884.17	Eif4a2	chr16	protein_coding	eukaryotic translation initiation factor 4A2
chr16	22927601	22928735	+	22928009	22928735	5pMXE	0.5	50	50	ENSMUST00000125553.2	ENSMUSG00000022884.17	Eif4a2	chr16	protein_coding	eukaryotic translation initiation factor 4A2
chr16	22939738;22941050	22940980;22943286	-	22939738	22943286	cassetteExon	0.5	100	100	ENSMUST00000023598.15	ENSMUSG00000022881.16	Rfc4	chr16	protein_coding	replication factor C (activator 1) 4
chr16	22965484	22973967	+	22965391	22973967	A5SS	0.5	50	50	ENSMUST00000023593.6	ENSMUSG00000022878.6	Adipoq	chr16	protein_coding	adiponectin, C1Q and collagen domain containing
chr16	23012317;23019964	23019736;23022241	+	23012317	23022241	cassetteExon	0.5	100	100	ENSMUST00000232204.2	ENSMUSG00000068463.5	B630019A10Rik	chr16	lncRNA	RIKEN cDNA B630019A10 gene
chr16	23011792	23012249	+	22994153	23012249	A5SS	0.33	50	50	ENSMUST00000232204.2	ENSMUSG00000068463.5	B630019A10Rik	chr16	lncRNA	RIKEN cDNA B630019A10 gene
chr16	23011893	23012249	+	22994153	23012249	A5SS	0.33	50	50	ENSMUST00000232204.2	ENSMUSG00000068463.5	B630019A10Rik	chr16	lncRNA	RIKEN cDNA B630019A10 gene
chr16	22994153	23012249	+	22994153	23037513	A3SS	0.5	50	50	ENSMUST00000149488.2	ENSMUSG00000068463.5	B630019A10Rik	chr16	lncRNA	RIKEN cDNA B630019A10 gene
chr16	23011792	23012249	+	23011893	23012249	A5SS	0.5	50	50	ENSMUST00000232174.2	ENSMUSG00000068463.5	B630019A10Rik	chr16	lncRNA	RIKEN cDNA B630019A10 gene
chr16	23012317	23022241	+	23012317	23019736	A3SS	0.5	50	50	ENSMUST00000232062.2	ENSMUSG00000068463.5	B630019A10Rik	chr16	lncRNA	RIKEN cDNA B630019A10 gene
chr16	23043194	23044218	-	23043194	23043780	5pMXE	0.5	50	50	ENSMUST00000055369.5	ENSMUSG00000045231.6	BC106179	chr16	lncRNA	cDNA sequence BC106179
chr16	23044929	23075709	+	23043979	23075709	A5SS	0.5	50	50	ENSMUST00000023601.14	ENSMUSG00000022885.17	St6gal1	chr16	protein_coding	beta galactoside alpha 2,6 sialyltransferase 1
chr16	23088458	23136314	+	23075851	23136314	A5SS	0.33	50	50	ENSMUST00000023601.14	ENSMUSG00000022885.17	St6gal1	chr16	protein_coding	beta galactoside alpha 2,6 sialyltransferase 1
chr16	23109388	23136314	+	23075851	23136314	A5SS	0.33	50	50	ENSMUST00000023601.14	ENSMUSG00000022885.17	St6gal1	chr16	protein_coding	beta galactoside alpha 2,6 sialyltransferase 1
chr16	23109388	23136314	+	23088458	23136314	A5SS	0.33	50	50	ENSMUST00000128050.8	ENSMUSG00000022885.17	St6gal1	chr16	protein_coding	beta galactoside alpha 2,6 sialyltransferase 1
chr16	23289480	23293624	-	23283915	23293624	A3SS	0.5	50	50	ENSMUST00000089883.7	ENSMUSG00000022887.10	Masp1	chr16	protein_coding	mannan-binding lectin serine peptidase 1
chr16	23298890	23302145	-	23295154	23302145	A3SS	0.5	50	50	ENSMUST00000089883.7	ENSMUSG00000022887.10	Masp1	chr16	protein_coding	mannan-binding lectin serine peptidase 1
chr16	23339224;23340703	23340437;23346245	+	23339224	23346245	cassetteExon	0.5	100	100	ENSMUST00000211460.2	ENSMUSG00000109783.2	Gm45338	chr16	lncRNA	predicted gene 45338
chr16	23346356;23373683	23373448;23378522	+	23346356;23362621	23353330;23378522	MXE	0.5	100	100	ENSMUST00000211460.2	ENSMUSG00000109783.2	Gm45338	chr16	lncRNA	predicted gene 45338
chr16	23353549;23373683	23373448;23378522	+	23353549;23362621	23362373;23378522	MXE	0.5	100	100	ENSMUST00000211460.2	ENSMUSG00000109783.2	Gm45338	chr16	lncRNA	predicted gene 45338
chr16	23340968	23346245	+	23339224	23346245	A5SS	0.33	50	50	ENSMUST00000211460.2	ENSMUSG00000109783.2	Gm45338	chr16	lncRNA	predicted gene 45338
chr16	23346356	23373448	+	23346356	23353330	3pMXE	0.25	50	50	ENSMUST00000210658.2	ENSMUSG00000109783.2	Gm45338	chr16	lncRNA	predicted gene 45338
chr16	23346356	23378522	+	23346356	23353330	3pMXE	0.25	50	50	ENSMUST00000210658.2	ENSMUSG00000109783.2	Gm45338	chr16	lncRNA	predicted gene 45338
chr16	23346356	23428679	+	23346356	23353330	3pMXE	0.25	50	50	ENSMUST00000210658.2	ENSMUSG00000109783.2	Gm45338	chr16	lncRNA	predicted gene 45338
chr16	23340968	23346245	+	23340703	23346245	A5SS	0.33	50	50	ENSMUST00000210658.2	ENSMUSG00000109783.2	Gm45338	chr16	lncRNA	predicted gene 45338
chr16	23346356	23428679	+	23346356	23378522	3pMXE	0.25	50	50	ENSMUST00000209198.2	ENSMUSG00000109783.2	Gm45338	chr16	lncRNA	predicted gene 45338
chr16	23346356;23373683	23373448;23378522	+	23346356	23378522	cassetteExon	0.5	100	100	ENSMUST00000209198.2	ENSMUSG00000109783.2	Gm45338	chr16	lncRNA	predicted gene 45338
chr16	23362621	23378522	+	23346356	23378522	A5SS	0.33	50	50	ENSMUST00000209198.2	ENSMUSG00000109783.2	Gm45338	chr16	lncRNA	predicted gene 45338
chr16	23346356	23373448	+	23346356;23353549	23353330;23373448	ES	0.5	50	50	ENSMUST00000210371.2	ENSMUSG00000109783.2	Gm45338	chr16	lncRNA	predicted gene 45338
chr16	23339224	23346245	+	23339224;23340968	23340437;23346245	ES	0.33	50	50	ENSMUST00000211499.2	ENSMUSG00000109783.2	Gm45338	chr16	lncRNA	predicted gene 45338
chr16	23353549	23373448	+	23353549	23362373	3pMXE	0.5	50	50	ENSMUST00000211499.2	ENSMUSG00000109783.2	Gm45338	chr16	lncRNA	predicted gene 45338
chr16	23362621	23378522	+	23373683	23378522	A5SS&ES	0.33	50	50	ENSMUST00000210795.2	ENSMUSG00000109783.2	Gm45338	chr16	lncRNA	predicted gene 45338
chr16	23346356	23373448	+	23346356	23428679	A3SS	0.25	50	50	ENSMUST00000209422.2	ENSMUSG00000033355.7	Rtp4	chr16	protein_coding	receptor transporter protein 4
chr16	23428899	23431848	+	23428899	23431631	A3SS	0.5	50	50	ENSMUST00000209422.2	ENSMUSG00000033355.7	Rtp4	chr16	protein_coding	receptor transporter protein 4
chr16	23421285	23428679	+	23346356	23428679	A5SS	0.33	50	50	ENSMUST00000209422.2	ENSMUSG00000033355.7	Rtp4	chr16	protein_coding	receptor transporter protein 4
chr16	23427887	23428679	+	23346356	23428679	A5SS	0.33	50	50	ENSMUST00000209422.2	ENSMUSG00000033355.7	Rtp4	chr16	protein_coding	receptor transporter protein 4
chr16	23427887	23428679	+	23421285	23428679	A5SS	0.5	50	50	ENSMUST00000211569.2	ENSMUSG00000033355.7	Rtp4	chr16	protein_coding	receptor transporter protein 4
chr16	24105130	24155438	-	24105130	24108481	5pMXE	0.5	50	50	ENSMUST00000230383.2	ENSMUSG00000115852.3	Gm52969	chr16	transcribed_processed_pseudogene	predicted gene, 52969
chr16	24089975	24104975	-	23967448	24104975	A3SS	0.5	50	50	ENSMUST00000230383.2	ENSMUSG00000115852.3	Gm52969	chr16	transcribed_processed_pseudogene	predicted gene, 52969
chr16	24005035	24023489	-	24005035;24011841	24011671;24023489	ES	0.5	50	50	ENSMUST00000229881.2	ENSMUSG00000115869.2	Gm31814	chr16	lncRNA	predicted gene, 31814
chr16	24034039	24035124	-	24034039	24034941	5pMXE	0.5	50	50	ENSMUST00000229881.2	ENSMUSG00000115869.2	Gm31814	chr16	lncRNA	predicted gene, 31814
chr16	24032418	24032674	-	24032418	24033864	A5SS	0.5	50	50	ENSMUST00000229881.2	ENSMUSG00000115869.2	Gm31814	chr16	lncRNA	predicted gene, 31814
chr16	24032418;24032709	24032674;24035105	-	24032418	24035105	cassetteExon	0.5	100	100	ENSMUST00000228980.2	ENSMUSG00000115869.2	Gm31814	chr16	lncRNA	predicted gene, 31814
chr16	24032418	24033864	-	24032418	24035105	A5SS	0.33	50	50	ENSMUST00000228980.2	ENSMUSG00000115869.2	Gm31814	chr16	lncRNA	predicted gene, 31814
chr16	24026701	24032336	-	24005035	24032336	A3SS	0.5	50	50	ENSMUST00000230785.2	ENSMUSG00000115869.2	Gm31814	chr16	lncRNA	predicted gene, 31814
chr16	24005035	24011671	-	24005035	24032336	A5SS	0.33	50	50	ENSMUST00000230785.2	ENSMUSG00000115869.2	Gm31814	chr16	lncRNA	predicted gene, 31814
chr16	24005035	24023489	-	24005035	24032336	A5SS	0.33	50	50	ENSMUST00000230785.2	ENSMUSG00000115869.2	Gm31814	chr16	lncRNA	predicted gene, 31814
chr16	24026701	24032336	-	24026701	24081870	A5SS	0.5	50	50	ENSMUST00000230869.2	ENSMUSG00000115869.2	Gm31814	chr16	lncRNA	predicted gene, 31814
chr16	24212533	24261531	+	24212354	24261531	A5SS	0.5	50	50	ENSMUST00000231352.2	ENSMUSG00000033306.16	Lpp	chr16	protein_coding	LIM domain containing preferred translocation partner in lipoma
chr16	24266998	24275583	+	24261640	24275583	A5SS	0.5	50	50	ENSMUST00000231352.2	ENSMUSG00000033306.16	Lpp	chr16	protein_coding	LIM domain containing preferred translocation partner in lipoma
chr16	24663967	24790581	+	24663967;24708709	24708540;24790581	ES	0.5	50	50	ENSMUST00000038053.14	ENSMUSG00000033306.16	Lpp	chr16	protein_coding	LIM domain containing preferred translocation partner in lipoma
chr16	24540886	24580343	+	24500621	24580343	A5SS	0.5	50	50	ENSMUST00000038053.14	ENSMUSG00000033306.16	Lpp	chr16	protein_coding	LIM domain containing preferred translocation partner in lipoma
chr16	25620851	25639138	+	25583046	25639138	A5SS	0.5	50	50	ENSMUST00000115307.8	ENSMUSG00000022510.15	Trp63	chr16	protein_coding	transformation related protein 63
chr16	25689883	25701277	+	25689883	25695377	3pMXE	0.5	50	50	ENSMUST00000115308.9	ENSMUSG00000022510.15	Trp63	chr16	protein_coding	transformation related protein 63
chr16	25684961	25686917	+	25684949	25686917	A5SS	0.5	50	50	ENSMUST00000115308.9	ENSMUSG00000022510.15	Trp63	chr16	protein_coding	transformation related protein 63
chr16	25703705;25705049	25704956;25707758	+	25703705	25707758	cassetteExon	0.5	100	100	ENSMUST00000065523.12	ENSMUSG00000022510.15	Trp63	chr16	protein_coding	transformation related protein 63
chr16	25804375	25805902	-	25803824	25805902	A3SS	0.5	50	50	ENSMUST00000039990.6	ENSMUSG00000038168.6	P3h2	chr16	protein_coding	prolyl 3-hydroxylase 2
chr16	25816043	25833128	-	25816043	25923966	A5SS	0.5	50	50	ENSMUST00000039990.6	ENSMUSG00000038168.6	P3h2	chr16	protein_coding	prolyl 3-hydroxylase 2
chr16	26517703	26529231	+	26517703;26519986	26519838;26529231	ES	0.5	50	50	ENSMUST00000096129.9	ENSMUSG00000022514.15	Il1rap	chr16	protein_coding	interleukin 1 receptor accessory protein
chr16	26531010	26533451	+	26531010	26541106	A3SS	0.5	50	50	ENSMUST00000096129.9	ENSMUSG00000022514.15	Il1rap	chr16	protein_coding	interleukin 1 receptor accessory protein
chr16	26517703	26529231	+	26517703	26519838	3pMXE	0.5	50	50	ENSMUST00000174202.8	ENSMUSG00000022514.15	Il1rap	chr16	protein_coding	interleukin 1 receptor accessory protein
chr16	26545947	26546266	+	26542056	26546266	A5SS	0.5	50	50	ENSMUST00000173136.2	ENSMUSG00000022514.15	Il1rap	chr16	protein_coding	interleukin 1 receptor accessory protein
chr16	26533803;26549011	26548955;26551975	-	26533803	26551975	cassetteExon	0.5	100	100	ENSMUST00000172522.8	ENSMUSG00000092545.8	Gm20319	chr16	lncRNA	predicted gene, 20319
chr16	26533803	26551975	-	26549011	26551975	3pMXE	0.5	50	50	ENSMUST00000173291.2	ENSMUSG00000092545.8	Gm20319	chr16	lncRNA	predicted gene, 20319
chr16	26782722	26808659	-	26782722	26784326	5pMXE	0.5	50	50	ENSMUST00000231417.2	ENSMUSG00000068428.8	Gmnc	chr16	protein_coding	geminin coiled-coil domain containing
chr16	26779621	26781644	-	26762425	26781644	A3SS	0.5	50	50	ENSMUST00000231417.2	ENSMUSG00000068428.8	Gmnc	chr16	protein_coding	geminin coiled-coil domain containing
chr16	26782722	26808659	-	26782722;26784500	26784326;26808659	ES	0.5	50	50	ENSMUST00000089832.6	ENSMUSG00000068428.8	Gmnc	chr16	protein_coding	geminin coiled-coil domain containing
chr16	26784500	26786591	-	26784500	26808659	A5SS	0.5	50	50	ENSMUST00000089832.6	ENSMUSG00000068428.8	Gmnc	chr16	protein_coding	geminin coiled-coil domain containing
chr16	27236115	27254312	+	27236115;27240967	27240443;27254312	ES	0.5	50	50	ENSMUST00000239351.2	ENSMUSG00000038127.16	Ccdc50	chr16	protein_coding	coiled-coil domain containing 50
chr16	27254427	27255248	+	27254427;27255162	27255118;27255248	ES	0.5	50	50	ENSMUST00000239351.2	ENSMUSG00000038127.16	Ccdc50	chr16	protein_coding	coiled-coil domain containing 50
chr16	27208738	27224397	+	27207887	27224397	A5SS	0.5	50	50	ENSMUST00000239351.2	ENSMUSG00000038127.16	Ccdc50	chr16	protein_coding	coiled-coil domain containing 50
chr16	27236115	27240443	+	27236115	27254312	A3SS	0.5	50	50	ENSMUST00000100026.10	ENSMUSG00000038127.16	Ccdc50	chr16	protein_coding	coiled-coil domain containing 50
chr16	27240967	27254312	+	27236115	27254312	A5SS	0.5	50	50	ENSMUST00000100026.10	ENSMUSG00000038127.16	Ccdc50	chr16	protein_coding	coiled-coil domain containing 50
chr16	27208738	27209637	+	27208738	27224397	A3SS	0.5	50	50	ENSMUST00000143823.2	ENSMUSG00000038127.16	Ccdc50	chr16	protein_coding	coiled-coil domain containing 50
chr16	28217140	28383327	-	28217140	28263745	5pMXE	0.33	50	50	ENSMUST00000100024.3	ENSMUSG00000022523.11	Fgf12	chr16	protein_coding	fibroblast growth factor 12
chr16	28217140	28571586	-	28217140	28263745	5pMXE	0.33	50	50	ENSMUST00000100024.3	ENSMUSG00000022523.11	Fgf12	chr16	protein_coding	fibroblast growth factor 12
chr16	28008384	28010763	-	28008384	28191665	A5SS	0.33	50	50	ENSMUST00000100024.3	ENSMUSG00000022523.11	Fgf12	chr16	protein_coding	fibroblast growth factor 12
chr16	28008384	28110458	-	28008384	28191665	A5SS	0.33	50	50	ENSMUST00000100024.3	ENSMUSG00000022523.11	Fgf12	chr16	protein_coding	fibroblast growth factor 12
chr16	28008384	28110458	-	28008384	28010763	5pMXE	0.33	50	50	ENSMUST00000232632.2	ENSMUSG00000022523.11	Fgf12	chr16	protein_coding	fibroblast growth factor 12
chr16	28217140	28383327	-	28217140	28571586	A5SS	0.33	50	50	ENSMUST00000232352.2	ENSMUSG00000022523.11	Fgf12	chr16	protein_coding	fibroblast growth factor 12
chr16	28647761	28653903	-	28647761	28748205	A5SS	0.5	50	50	ENSMUST00000100023.3	ENSMUSG00000051065.10	Mb21d2	chr16	protein_coding	Mab-21 domain containing 2
chr16	29036502	29046888	+	29036502;29039326	29039061;29046888	ES	0.5	50	50	ENSMUST00000089824.11	ENSMUSG00000022525.14	Plaat1	chr16	protein_coding	phospholipase A and acyltransferase 1
chr16	29036502;29038329	29038162;29039061	+	29036502	29039061	cassetteExon	0.5	100	100	ENSMUST00000089824.11	ENSMUSG00000022525.14	Plaat1	chr16	protein_coding	phospholipase A and acyltransferase 1
chr16	29029061	29036364	+	29028561	29036364	A5SS	0.5	50	50	ENSMUST00000089824.11	ENSMUSG00000022525.14	Plaat1	chr16	protein_coding	phospholipase A and acyltransferase 1
chr16	29036502	29038162	+	29036502	29046888	A3SS	0.33	50	50	ENSMUST00000160794.2	ENSMUSG00000022525.14	Plaat1	chr16	protein_coding	phospholipase A and acyltransferase 1
chr16	29147557	29157843	-	29147557;29152900	29152766;29157843	ES	0.5	50	50	ENSMUST00000075806.11	ENSMUSG00000048939.14	Atp13a5	chr16	protein_coding	ATPase type 13A5
chr16	29070177;29075828	29075766;29079669	-	29070177	29079669	cassetteExon	0.5	100	100	ENSMUST00000075806.11	ENSMUSG00000048939.14	Atp13a5	chr16	protein_coding	ATPase type 13A5
chr16	29167388	29167536	-	29167388	29167494	A5SS	0.5	50	50	ENSMUST00000075806.11	ENSMUSG00000048939.14	Atp13a5	chr16	protein_coding	ATPase type 13A5
chr16	29147557	29157843	-	29152900	29157843	3pMXE	0.5	50	50	ENSMUST00000152040.2	ENSMUSG00000048939.14	Atp13a5	chr16	protein_coding	ATPase type 13A5
chr16	29240600	29252790	-	29240600;29241568	29241405;29252790	ES	0.5	50	50	ENSMUST00000182573.8	ENSMUSG00000038094.16	Atp13a4	chr16	protein_coding	ATPase type 13A4
chr16	29239739	29240478	-	29239277	29240478	A3SS	0.33	50	50	ENSMUST00000182573.8	ENSMUSG00000038094.16	Atp13a4	chr16	protein_coding	ATPase type 13A4
chr16	29239768	29240478	-	29239277	29240478	A3SS	0.33	50	50	ENSMUST00000182573.8	ENSMUSG00000038094.16	Atp13a4	chr16	protein_coding	ATPase type 13A4
chr16	29232619	29234601	-	29232619	29234629	A5SS	0.5	50	50	ENSMUST00000182573.8	ENSMUSG00000038094.16	Atp13a4	chr16	protein_coding	ATPase type 13A4
chr16	29273698	29274242	-	29273698	29274185	A5SS	0.5	50	50	ENSMUST00000182573.8	ENSMUSG00000038094.16	Atp13a4	chr16	protein_coding	ATPase type 13A4
chr16	29298620	29308828	-	29298720	29308828	A3SS	0.5	50	50	ENSMUST00000182627.8	ENSMUSG00000038094.16	Atp13a4	chr16	protein_coding	ATPase type 13A4
chr16	29292321	29294206	-	29288128	29294206	A3SS	0.5	50	50	ENSMUST00000182013.8	ENSMUSG00000038094.16	Atp13a4	chr16	protein_coding	ATPase type 13A4
chr16	29360554	29363532	-	29360203	29363532	A3SS	0.5	50	50	ENSMUST00000182013.8	ENSMUSG00000038094.16	Atp13a4	chr16	protein_coding	ATPase type 13A4
chr16	29288128	29290707	-	29288128	29294206	A5SS	0.5	50	50	ENSMUST00000182013.8	ENSMUSG00000038094.16	Atp13a4	chr16	protein_coding	ATPase type 13A4
chr16	29239768	29240478	-	29239739	29240478	A3SS	0.33	50	50	ENSMUST00000182168.8	ENSMUSG00000038094.16	Atp13a4	chr16	protein_coding	ATPase type 13A4
chr16	29407177;29407694	29407641;29408499	+	29407177	29408499	cassetteExon	0.5	100	100	ENSMUST00000160597.8	ENSMUSG00000038084.17	Opa1	chr16	protein_coding	OPA1, mitochondrial dynamin like GTPase
chr16	29408566;29416514	29416404;29421030	+	29408566	29421030	cassetteExon	0.5	100	100	ENSMUST00000160597.8	ENSMUSG00000038084.17	Opa1	chr16	protein_coding	OPA1, mitochondrial dynamin like GTPase
chr16	29437126	29439199	+	29437105	29439199	A5SS	0.5	50	50	ENSMUST00000160597.8	ENSMUSG00000038084.17	Opa1	chr16	protein_coding	OPA1, mitochondrial dynamin like GTPase
chr16	29757885	29765272	-	29729413	29765272	A3SS	0.5	50	50	ENSMUST00000181968.2	ENSMUSG00000097313.3	Gm26569	chr16	lncRNA	predicted gene, 26569
chr16	29885360	29885690	+	29885068	29885690	A5SS	0.5	50	50	ENSMUST00000023171.8	ENSMUSG00000022528.9	Hes1	chr16	protein_coding	hes family bHLH transcription factor 1
chr16	30206470	30221567	-	30206470	30207166	5pMXE	0.5	50	50	ENSMUST00000061350.13	ENSMUSG00000022533.15	Atp13a3	chr16	protein_coding	ATPase type 13A3
chr16	30134719;30140713	30140624;30141690	-	30134719	30141690	cassetteExon	0.5	100	100	ENSMUST00000061350.13	ENSMUSG00000022533.15	Atp13a3	chr16	protein_coding	ATPase type 13A3
chr16	30151204	30152542	-	30151204	30152577	A5SS	0.5	50	50	ENSMUST00000061350.13	ENSMUSG00000022533.15	Atp13a3	chr16	protein_coding	ATPase type 13A3
chr16	30366287	30369181	-	30366287	30368211	5pMXE	0.33	50	50	ENSMUST00000144491.8	ENSMUSG00000022537.19	Tmem44	chr16	protein_coding	transmembrane protein 44
chr16	30333640;30337150	30337118;30348230	-	30333640	30348230	cassetteExon	0.5	100	100	ENSMUST00000144491.8	ENSMUSG00000022537.19	Tmem44	chr16	protein_coding	transmembrane protein 44
chr16	30333640	30335971	-	30333640	30348230	A5SS	0.33	50	50	ENSMUST00000144491.8	ENSMUSG00000022537.19	Tmem44	chr16	protein_coding	transmembrane protein 44
chr16	30366287	30366936	-	30366287	30368211	A5SS	0.33	50	50	ENSMUST00000144491.8	ENSMUSG00000022537.19	Tmem44	chr16	protein_coding	transmembrane protein 44
chr16	30366287	30369181	-	30366287;30368275	30368211;30369181	ES	0.25	50	50	ENSMUST00000089775.11	ENSMUSG00000022537.19	Tmem44	chr16	protein_coding	transmembrane protein 44
chr16	30333640;30336276	30335971;30337118	-	30333640	30337118	cassetteExon	0.5	100	100	ENSMUST00000089775.11	ENSMUSG00000022537.19	Tmem44	chr16	protein_coding	transmembrane protein 44
chr16	30366287;30367146	30366936;30369181	-	30366287;30368275	30368211;30369181	MXE	0.5	100	100	ENSMUST00000089775.11	ENSMUSG00000022537.19	Tmem44	chr16	protein_coding	transmembrane protein 44
chr16	30336663	30337118	-	30333640	30337118	A3SS	0.33	50	50	ENSMUST00000089775.11	ENSMUSG00000022537.19	Tmem44	chr16	protein_coding	transmembrane protein 44
chr16	30368279	30369181	-	30368275	30369181	A3SS	0.25	50	50	ENSMUST00000089775.11	ENSMUSG00000022537.19	Tmem44	chr16	protein_coding	transmembrane protein 44
chr16	30366287;30367146	30366936;30369181	-	30366287	30369181	cassetteExon	0.5	100	100	ENSMUST00000140402.8	ENSMUSG00000022537.19	Tmem44	chr16	protein_coding	transmembrane protein 44
chr16	30366287;30368279	30368211;30369181	-	30366287	30369181	cassetteExon	0.5	100	100	ENSMUST00000140402.8	ENSMUSG00000022537.19	Tmem44	chr16	protein_coding	transmembrane protein 44
chr16	30366287;30367146	30366936;30369181	-	30366287;30368279	30368211;30369181	MXE	0.5	100	100	ENSMUST00000144001.9	ENSMUSG00000022537.19	Tmem44	chr16	protein_coding	transmembrane protein 44
chr16	30336663	30337118	-	30336276	30337118	A3SS	0.33	50	50	ENSMUST00000149110.3	ENSMUSG00000022537.19	Tmem44	chr16	protein_coding	transmembrane protein 44
chr16	30333640	30348230	-	30337150	30348230	3pMXE	0.5	50	50	ENSMUST00000125559.8	ENSMUSG00000022537.19	Tmem44	chr16	protein_coding	transmembrane protein 44
chr16	30393424	30400874	-	30393424;30399863	30399777;30400874	ES	0.5	50	50	ENSMUST00000117363.9	ENSMUSG00000022538.21	Lsg1	chr16	protein_coding	large 60S subunit nuclear export GTPase 1
chr16	30401469	30406256	-	30401469;30404498	30404372;30406256	ES	0.5	50	50	ENSMUST00000117363.9	ENSMUSG00000022538.21	Lsg1	chr16	protein_coding	large 60S subunit nuclear export GTPase 1
chr16	30393424;30396815	30396617;30399777	-	30393424	30399777	cassetteExon	0.5	100	100	ENSMUST00000117363.9	ENSMUSG00000022538.21	Lsg1	chr16	protein_coding	large 60S subunit nuclear export GTPase 1
chr16	30393424;30396815	30396717;30399777	-	30393424	30399777	cassetteExon	0.5	100	100	ENSMUST00000117363.9	ENSMUSG00000022538.21	Lsg1	chr16	protein_coding	large 60S subunit nuclear export GTPase 1
chr16	30400978	30401349	-	30400960	30401349	A3SS	0.5	50	50	ENSMUST00000117363.9	ENSMUSG00000022538.21	Lsg1	chr16	protein_coding	large 60S subunit nuclear export GTPase 1
chr16	30393424	30396617	-	30393424	30396717	A5SS	0.25	50	50	ENSMUST00000143170.9	ENSMUSG00000022538.21	Lsg1	chr16	protein_coding	large 60S subunit nuclear export GTPase 1
chr16	30401469	30406256	-	30401469	30404372	5pMXE	0.5	50	50	ENSMUST00000123286.2	ENSMUSG00000022538.21	Lsg1	chr16	protein_coding	large 60S subunit nuclear export GTPase 1
chr16	30393424	30396617	-	30393424	30400874	A5SS	0.25	50	50	ENSMUST00000123286.2	ENSMUSG00000022538.21	Lsg1	chr16	protein_coding	large 60S subunit nuclear export GTPase 1
chr16	30393424	30396717	-	30393424	30400874	A5SS	0.25	50	50	ENSMUST00000123286.2	ENSMUSG00000022538.21	Lsg1	chr16	protein_coding	large 60S subunit nuclear export GTPase 1
chr16	30733595	30747179	-	30734392	30747179	A3SS	0.5	50	50	ENSMUST00000232280.2	ENSMUSG00000116581.2	Gm46565	chr16	lncRNA	predicted gene, 46565
chr16	30869597	30880145	-	30869597	30899653	A5SS	0.25	50	50	ENSMUST00000055389.9	ENSMUSG00000047434.15	Xxylt1	chr16	protein_coding	xyloside xylosyltransferase 1
chr16	30869597	30886510	-	30869597	30899653	A5SS	0.25	50	50	ENSMUST00000055389.9	ENSMUSG00000047434.15	Xxylt1	chr16	protein_coding	xyloside xylosyltransferase 1
chr16	30869597	30888483	-	30869597	30899653	A5SS	0.25	50	50	ENSMUST00000055389.9	ENSMUSG00000047434.15	Xxylt1	chr16	protein_coding	xyloside xylosyltransferase 1
chr16	30869597	30886510	-	30869597	30880145	5pMXE	0.25	50	50	ENSMUST00000140566.8	ENSMUSG00000047434.15	Xxylt1	chr16	protein_coding	xyloside xylosyltransferase 1
chr16	30869597	30888483	-	30869597	30880145	5pMXE	0.25	50	50	ENSMUST00000140566.8	ENSMUSG00000047434.15	Xxylt1	chr16	protein_coding	xyloside xylosyltransferase 1
chr16	30869597	30886510	-	30869597	30888483	A5SS	0.25	50	50	ENSMUST00000153859.8	ENSMUSG00000047434.15	Xxylt1	chr16	protein_coding	xyloside xylosyltransferase 1
chr16	30960615	30973391	-	30960615;30972577	30972510;30973391	ES	0.5	50	50	ENSMUST00000230698.2	ENSMUSG00000049076.13	Acap2	chr16	protein_coding	ArfGAP with coiled-coil, ankyrin repeat and PH domains 2
chr16	30925960;30926450	30926346;30926845	-	30925960	30926845	cassetteExon	0.5	100	100	ENSMUST00000230698.2	ENSMUSG00000049076.13	Acap2	chr16	protein_coding	ArfGAP with coiled-coil, ankyrin repeat and PH domains 2
chr16	30938265;30941459	30941439;30946139	-	30938265	30946139	cassetteExon	0.5	100	100	ENSMUST00000230698.2	ENSMUSG00000049076.13	Acap2	chr16	protein_coding	ArfGAP with coiled-coil, ankyrin repeat and PH domains 2
chr16	30915264	30915460	-	30915264	30920643	A5SS	0.5	50	50	ENSMUST00000230698.2	ENSMUSG00000049076.13	Acap2	chr16	protein_coding	ArfGAP with coiled-coil, ankyrin repeat and PH domains 2
chr16	30960615	30972524	-	30960615	30972510	A5SS	0.33	50	50	ENSMUST00000230698.2	ENSMUSG00000049076.13	Acap2	chr16	protein_coding	ArfGAP with coiled-coil, ankyrin repeat and PH domains 2
chr16	30960615;30972577	30972524;30973391	-	30960615	30973391	cassetteExon	0.5	100	100	ENSMUST00000058033.9	ENSMUSG00000049076.13	Acap2	chr16	protein_coding	ArfGAP with coiled-coil, ankyrin repeat and PH domains 2
chr16	31055022	31059502	+	31052433	31059502	A5SS	0.5	50	50	ENSMUST00000232655.2	ENSMUSG00000116946.2	Gm41442	chr16	lncRNA	predicted gene, 41442
chr16	31129982	31133370	-	31129982;31133286	31133217;31133370	ES	0.5	50	50	ENSMUST00000130560.8	ENSMUSG00000022548.15	Apod	chr16	protein_coding	apolipoprotein D
chr16	31116483	31119213	-	31116394	31119213	A3SS	0.5	50	50	ENSMUST00000130560.8	ENSMUSG00000022548.15	Apod	chr16	protein_coding	apolipoprotein D
chr16	31129982	31133370	-	31129982	31133217	A5SS	0.5	50	50	ENSMUST00000023207.15	ENSMUSG00000022548.15	Apod	chr16	protein_coding	apolipoprotein D
chr16	31233451	31234078	+	31231443	31234078	A5SS	0.5	50	50	ENSMUST00000231511.2	ENSMUSG00000116690.2	Gm49736	chr16	lncRNA	predicted gene, 49736
chr16	31256935;31264251	31264164;31265410	+	31256935	31265410	cassetteExon	0.5	100	100	ENSMUST00000089759.9	ENSMUSG00000046598.16	Bdh1	chr16	protein_coding	3-hydroxybutyrate dehydrogenase, type 1
chr16	31247805	31256810	+	31241330	31256810	A5SS	0.25	50	50	ENSMUST00000089759.9	ENSMUSG00000046598.16	Bdh1	chr16	protein_coding	3-hydroxybutyrate dehydrogenase, type 1
chr16	31248409	31256810	+	31241330	31256810	A5SS	0.25	50	50	ENSMUST00000089759.9	ENSMUSG00000046598.16	Bdh1	chr16	protein_coding	3-hydroxybutyrate dehydrogenase, type 1
chr16	31254984	31256810	+	31241330	31256810	A5SS	0.25	50	50	ENSMUST00000089759.9	ENSMUSG00000046598.16	Bdh1	chr16	protein_coding	3-hydroxybutyrate dehydrogenase, type 1
chr16	31248409	31256810	+	31247805	31256810	A5SS	0.25	50	50	ENSMUST00000115227.10	ENSMUSG00000046598.16	Bdh1	chr16	protein_coding	3-hydroxybutyrate dehydrogenase, type 1
chr16	31254984	31256810	+	31247805	31256810	A5SS	0.25	50	50	ENSMUST00000115227.10	ENSMUSG00000046598.16	Bdh1	chr16	protein_coding	3-hydroxybutyrate dehydrogenase, type 1
chr16	31254984	31256810	+	31248409	31256810	A5SS	0.25	50	50	ENSMUST00000115226.8	ENSMUSG00000046598.16	Bdh1	chr16	protein_coding	3-hydroxybutyrate dehydrogenase, type 1
chr16	31437175	31457196	+	31437175	31439904	3pMXE	0.5	50	50	ENSMUST00000232340.2	ENSMUSG00000116597.2	Gm536	chr16	lncRNA	predicted gene 536
chr16	31562088	31600600	+	31562088;31590673	31590575;31600600	ES	0.5	50	50	ENSMUST00000115205.9	ENSMUSG00000022770.18	Dlg1	chr16	protein_coding	discs large MAGUK scaffold protein 1
chr16	31661657;31665751	31665652;31666454	+	31661657	31666454	cassetteExon	0.5	100	100	ENSMUST00000115205.9	ENSMUSG00000022770.18	Dlg1	chr16	protein_coding	discs large MAGUK scaffold protein 1
chr16	31661657;31665751	31665652;31672661	+	31661657;31666487	31666454;31672661	MXE	0.5	100	100	ENSMUST00000115205.9	ENSMUSG00000022770.18	Dlg1	chr16	protein_coding	discs large MAGUK scaffold protein 1
chr16	31661657;31665751	31665655;31666454	+	31661657	31666454	cassetteExon	0.5	100	100	ENSMUST00000115205.9	ENSMUSG00000022770.18	Dlg1	chr16	protein_coding	discs large MAGUK scaffold protein 1
chr16	31661657;31665751	31665655;31672661	+	31661657;31666487	31666454;31672661	MXE	0.5	100	100	ENSMUST00000115205.9	ENSMUSG00000022770.18	Dlg1	chr16	protein_coding	discs large MAGUK scaffold protein 1
chr16	31672702;31673506	31673471;31675259	+	31672702	31675259	cassetteExon	0.5	100	100	ENSMUST00000115205.9	ENSMUSG00000022770.18	Dlg1	chr16	protein_coding	discs large MAGUK scaffold protein 1
chr16	31672702;31673506	31673486;31675259	+	31672702	31675259	cassetteExon	0.5	100	100	ENSMUST00000115205.9	ENSMUSG00000022770.18	Dlg1	chr16	protein_coding	discs large MAGUK scaffold protein 1
chr16	31655122	31656863	+	31655122	31656868	A3SS	0.5	50	50	ENSMUST00000115205.9	ENSMUSG00000022770.18	Dlg1	chr16	protein_coding	discs large MAGUK scaffold protein 1
chr16	31483139	31483639	+	31482306	31483639	A5SS	0.5	50	50	ENSMUST00000115205.9	ENSMUSG00000022770.18	Dlg1	chr16	protein_coding	discs large MAGUK scaffold protein 1
chr16	31573834	31590575	+	31562088	31590575	A5SS	0.5	50	50	ENSMUST00000115205.9	ENSMUSG00000022770.18	Dlg1	chr16	protein_coding	discs large MAGUK scaffold protein 1
chr16	31615783	31624432	+	31615828	31624432	A5SS	0.5	50	50	ENSMUST00000115205.9	ENSMUSG00000022770.18	Dlg1	chr16	protein_coding	discs large MAGUK scaffold protein 1
chr16	31672702	31673471	+	31672702	31673486	A3SS	0.33	50	50	ENSMUST00000115201.8	ENSMUSG00000022770.18	Dlg1	chr16	protein_coding	discs large MAGUK scaffold protein 1
chr16	31665751;31666487	31666454;31672661	+	31665751	31672661	cassetteExon	0.5	100	100	ENSMUST00000064477.14	ENSMUSG00000022770.18	Dlg1	chr16	protein_coding	discs large MAGUK scaffold protein 1
chr16	31661657	31665655	+	31661657	31665652	A3SS	0.33	50	50	ENSMUST00000064477.14	ENSMUSG00000022770.18	Dlg1	chr16	protein_coding	discs large MAGUK scaffold protein 1
chr16	31562088	31600600	+	31562088	31590575	3pMXE	0.5	50	50	ENSMUST00000155958.2	ENSMUSG00000022770.18	Dlg1	chr16	protein_coding	discs large MAGUK scaffold protein 1
chr16	31661657	31666454	+	31661657	31665652	A3SS&ES	0.33	50	50	ENSMUST00000147382.2	ENSMUSG00000022770.18	Dlg1	chr16	protein_coding	discs large MAGUK scaffold protein 1
chr16	31665751	31672661	+	31666487	31672661	5pMXE	0.5	50	50	ENSMUST00000155847.8	ENSMUSG00000022770.18	Dlg1	chr16	protein_coding	discs large MAGUK scaffold protein 1
chr16	31752861	31760728	+	31752861	31760731	A3SS	0.5	50	50	ENSMUST00000052174.3	ENSMUSG00000045625.6	Pigz	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Z
chr16	31760924	31761314	+	31760924	31763068	A3SS	0.25	50	50	ENSMUST00000052174.3	ENSMUSG00000045625.6	Pigz	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Z
chr16	31760924	31761318	+	31760924	31763068	A3SS	0.25	50	50	ENSMUST00000052174.3	ENSMUSG00000045625.6	Pigz	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Z
chr16	31760924	31762842	+	31760924	31763068	A3SS	0.25	50	50	ENSMUST00000052174.3	ENSMUSG00000045625.6	Pigz	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Z
chr16	31760924	31761314	+	31760924	31762842	A3SS	0.25	50	50	ENSMUST00000151412.2	ENSMUSG00000045625.6	Pigz	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Z
chr16	31760924	31761318	+	31760924	31762842	A3SS	0.25	50	50	ENSMUST00000151412.2	ENSMUSG00000045625.6	Pigz	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Z
chr16	31760924	31761314	+	31760924	31761318	A3SS	0.25	50	50	ENSMUST00000134928.2	ENSMUSG00000045625.6	Pigz	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Z
chr16	31775247	31780469	+	31775247	31775757	3pMXE	0.33	50	50	ENSMUST00000023460.7	ENSMUSG00000022774.14	Ncbp2	chr16	protein_coding	nuclear cap binding protein subunit 2
chr16	31775247	31775653	+	31775247	31775757	A3SS	0.33	50	50	ENSMUST00000023460.7	ENSMUSG00000022774.14	Ncbp2	chr16	protein_coding	nuclear cap binding protein subunit 2
chr16	31775247	31780469	+	31775247	31775653	3pMXE	0.33	50	50	ENSMUST00000140965.8	ENSMUSG00000022774.14	Ncbp2	chr16	protein_coding	nuclear cap binding protein subunit 2
chr16	31794847	31796498	-	31787755	31796498	A3SS	0.5	50	50	ENSMUST00000231360.2	ENSMUSG00000022772.13	Senp5	chr16	protein_coding	SUMO/sentrin specific peptidase 5
chr16	31787755	31796417	-	31787755	31796498	A5SS	0.5	50	50	ENSMUST00000231360.2	ENSMUSG00000022772.13	Senp5	chr16	protein_coding	SUMO/sentrin specific peptidase 5
chr16	31809283	31821814	-	31809283	31821810	A5SS	0.5	50	50	ENSMUST00000231360.2	ENSMUSG00000022772.13	Senp5	chr16	protein_coding	SUMO/sentrin specific peptidase 5
chr16	31904155	31911162	-	31904155;31906325	31906112;31911162	ES	0.5	50	50	ENSMUST00000232321.2	ENSMUSG00000023791.19	Pigx	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class X
chr16	31911303;31914526	31914371;31915818	-	31911303	31915818	cassetteExon	0.5	100	100	ENSMUST00000232321.2	ENSMUSG00000023791.19	Pigx	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class X
chr16	31906325	31906866	-	31906325	31911162	A5SS	0.5	50	50	ENSMUST00000232321.2	ENSMUSG00000023791.19	Pigx	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class X
chr16	31911303	31918294	-	31911303	31915818	A5SS&ES	0.33	50	50	ENSMUST00000232321.2	ENSMUSG00000023791.19	Pigx	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class X
chr16	31915881	31917519	-	31915881	31918473	A5SS	0.25	50	50	ENSMUST00000232321.2	ENSMUSG00000023791.19	Pigx	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class X
chr16	31915881	31918288	-	31915881	31918473	A5SS	0.25	50	50	ENSMUST00000232321.2	ENSMUSG00000023791.19	Pigx	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class X
chr16	31915881	31918294	-	31915881	31918473	A5SS	0.25	50	50	ENSMUST00000232321.2	ENSMUSG00000023791.19	Pigx	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class X
chr16	31911303	31918294	-	31911303;31915881	31915818;31918294	ES	0.33	50	50	ENSMUST00000189013.8	ENSMUSG00000023791.19	Pigx	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class X
chr16	31915881;31917614	31917519;31918294	-	31915881	31918294	cassetteExon	0.5	100	100	ENSMUST00000189013.8	ENSMUSG00000023791.19	Pigx	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class X
chr16	31915881	31918288	-	31915881	31918294	A5SS	0.25	50	50	ENSMUST00000189013.8	ENSMUSG00000023791.19	Pigx	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class X
chr16	31917614	31918294	-	31911303	31918294	A3SS	0.33	50	50	ENSMUST00000143011.8	ENSMUSG00000023791.19	Pigx	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class X
chr16	31911303	31914371	-	31911303	31918294	A5SS	0.33	50	50	ENSMUST00000143011.8	ENSMUSG00000023791.19	Pigx	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class X
chr16	31915881	31917519	-	31915881	31918288	A5SS	0.25	50	50	ENSMUST00000096109.11	ENSMUSG00000023791.19	Pigx	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class X
chr16	31917614	31917717	-	31917614	31918294	A5SS	0.5	50	50	ENSMUST00000147003.8	ENSMUSG00000023791.19	Pigx	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class X
chr16	31904155	31911162	-	31906325	31911162	3pMXE	0.5	50	50	ENSMUST00000133584.8	ENSMUSG00000023791.19	Pigx	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class X
chr16	31915881	31918294	-	31915881	31917519	A5SS&ES	0.25	50	50	ENSMUST00000144216.2	ENSMUSG00000023791.19	Pigx	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class X
chr16	31921862	31922669	+	31921862	31922702	A3SS	0.5	50	50	ENSMUST00000115168.9	ENSMUSG00000035790.16	Cep19	chr16	protein_coding	centrosomal protein 19
chr16	31918915	31921785	+	31918929	31921785	A5SS	0.5	50	50	ENSMUST00000115168.9	ENSMUSG00000035790.16	Cep19	chr16	protein_coding	centrosomal protein 19
chr16	31963823	31984198	-	31963823;31966491	31966371;31984198	ES	0.25	50	50	ENSMUST00000099991.11	ENSMUSG00000052384.15	Nrros	chr16	protein_coding	negative regulator of reactive oxygen species
chr16	31966491;31974030	31973888;31984198	-	31966491	31984198	cassetteExon	0.5	100	100	ENSMUST00000099991.11	ENSMUSG00000052384.15	Nrros	chr16	protein_coding	negative regulator of reactive oxygen species
chr16	31966491;31982215	31982071;31984198	-	31966491	31984198	cassetteExon	0.5	100	100	ENSMUST00000099991.11	ENSMUSG00000052384.15	Nrros	chr16	protein_coding	negative regulator of reactive oxygen species
chr16	31963823	31984150	-	31963823	31966371	A5SS&ES	0.33	50	50	ENSMUST00000099991.11	ENSMUSG00000052384.15	Nrros	chr16	protein_coding	negative regulator of reactive oxygen species
chr16	31966491	31966877	-	31966491	31984198	A5SS	0.16	50	50	ENSMUST00000099991.11	ENSMUSG00000052384.15	Nrros	chr16	protein_coding	negative regulator of reactive oxygen species
chr16	31966491	31981056	-	31966491	31984198	A5SS	0.16	50	50	ENSMUST00000099991.11	ENSMUSG00000052384.15	Nrros	chr16	protein_coding	negative regulator of reactive oxygen species
chr16	31966491	31984150	-	31966491	31984198	A5SS	0.16	50	50	ENSMUST00000099991.11	ENSMUSG00000052384.15	Nrros	chr16	protein_coding	negative regulator of reactive oxygen species
chr16	31963823	31984198	-	31963823	31966371	5pMXE	0.33	50	50	ENSMUST00000126869.2	ENSMUSG00000052384.15	Nrros	chr16	protein_coding	negative regulator of reactive oxygen species
chr16	31963823;31966491	31966371;31984150	-	31963823	31984150	cassetteExon	0.5	100	100	ENSMUST00000231836.2	ENSMUSG00000052384.15	Nrros	chr16	protein_coding	negative regulator of reactive oxygen species
chr16	31963823	31984198	-	31963823	31984150	A5SS	0.33	50	50	ENSMUST00000231836.2	ENSMUSG00000052384.15	Nrros	chr16	protein_coding	negative regulator of reactive oxygen species
chr16	31974030	31984198	-	31963823	31984198	A3SS	0.25	50	50	ENSMUST00000115165.10	ENSMUSG00000052384.15	Nrros	chr16	protein_coding	negative regulator of reactive oxygen species
chr16	31982215	31984198	-	31963823	31984198	A3SS	0.25	50	50	ENSMUST00000115165.10	ENSMUSG00000052384.15	Nrros	chr16	protein_coding	negative regulator of reactive oxygen species
chr16	31966491	31984198	-	31966491;31982215	31981056;31984198	ES	0.25	50	50	ENSMUST00000115163.4	ENSMUSG00000052384.15	Nrros	chr16	protein_coding	negative regulator of reactive oxygen species
chr16	31966491;31974030	31973888;31984198	-	31966491;31982215	31981056;31984198	MXE	0.5	100	100	ENSMUST00000115163.4	ENSMUSG00000052384.15	Nrros	chr16	protein_coding	negative regulator of reactive oxygen species
chr16	31966491	31966877	-	31966491	31981056	A5SS	0.16	50	50	ENSMUST00000115163.4	ENSMUSG00000052384.15	Nrros	chr16	protein_coding	negative regulator of reactive oxygen species
chr16	31966491	31982071	-	31966491	31981056	A5SS	0.16	50	50	ENSMUST00000115163.4	ENSMUSG00000052384.15	Nrros	chr16	protein_coding	negative regulator of reactive oxygen species
chr16	31966491	31984150	-	31966491	31981056	A5SS&ES	0.16	50	50	ENSMUST00000115163.4	ENSMUSG00000052384.15	Nrros	chr16	protein_coding	negative regulator of reactive oxygen species
chr16	31966491;31974030	31973888;31984198	-	31966491;31982215	31982071;31984198	MXE	0.5	100	100	ENSMUST00000130410.8	ENSMUSG00000052384.15	Nrros	chr16	protein_coding	negative regulator of reactive oxygen species
chr16	31966491	31966877	-	31966491	31982071	A5SS	0.16	50	50	ENSMUST00000130410.8	ENSMUSG00000052384.15	Nrros	chr16	protein_coding	negative regulator of reactive oxygen species
chr16	31966491	31984150	-	31966491	31982071	A5SS&ES	0.16	50	50	ENSMUST00000130410.8	ENSMUSG00000052384.15	Nrros	chr16	protein_coding	negative regulator of reactive oxygen species
chr16	31966491	31973888	-	31966491	31966877	5pMXE	0.16	50	50	ENSMUST00000150250.2	ENSMUSG00000052384.15	Nrros	chr16	protein_coding	negative regulator of reactive oxygen species
chr16	31966491	31984150	-	31966491	31966877	5pMXE	0.16	50	50	ENSMUST00000150250.2	ENSMUSG00000052384.15	Nrros	chr16	protein_coding	negative regulator of reactive oxygen species
chr16	31966491	31973888	-	31966491	31984150	A5SS	0.16	50	50	ENSMUST00000144345.2	ENSMUSG00000052384.15	Nrros	chr16	protein_coding	negative regulator of reactive oxygen species
chr16	31966491	31981056	-	31966491	31973888	A5SS&ES	0.16	50	50	ENSMUST00000136809.2	ENSMUSG00000052384.15	Nrros	chr16	protein_coding	negative regulator of reactive oxygen species
chr16	32066343	32070641	+	32066085	32070641	A5SS	0.33	50	50	ENSMUST00000141820.8	ENSMUSG00000022787.11	Wdr53	chr16	protein_coding	WD repeat domain 53
chr16	32066446	32070641	+	32066085	32070641	A5SS	0.33	50	50	ENSMUST00000141820.8	ENSMUSG00000022787.11	Wdr53	chr16	protein_coding	WD repeat domain 53
chr16	32066446	32070641	+	32066343	32070641	A5SS	0.33	50	50	ENSMUST00000023474.4	ENSMUSG00000022787.11	Wdr53	chr16	protein_coding	WD repeat domain 53
chr16	32104367	32107937	+	32104367	32107978	A3SS	0.5	50	50	ENSMUST00000155649.8	ENSMUSG00000014074.18	Rnf168	chr16	protein_coding	ring finger protein 168
chr16	32178893	32188133	+	32178893;32186227	32186162;32188133	ES	0.5	50	50	ENSMUST00000115151.5	ENSMUSG00000053774.10	Ubxn7	chr16	protein_coding	UBX domain protein 7
chr16	32238745	32244059	+	32238745;32241771	32241638;32244059	ES	0.5	50	50	ENSMUST00000014220.15	ENSMUSG00000014075.16	Dynlt2b	chr16	protein_coding	dynein light chain Tctex-type 2B
chr16	32241771	32245676	+	32241771;32244128	32244059;32245676	ES	0.5	50	50	ENSMUST00000014220.15	ENSMUSG00000014075.16	Dynlt2b	chr16	protein_coding	dynein light chain Tctex-type 2B
chr16	32238745;32244128	32244059;32245676	+	32238745;32241771	32241638;32245676	MXE	0.5	100	100	ENSMUST00000080316.8	ENSMUSG00000014075.16	Dynlt2b	chr16	protein_coding	dynein light chain Tctex-type 2B
chr16	32250112	32270523	+	32249849	32270523	A5SS	0.33	50	50	ENSMUST00000115137.8	ENSMUSG00000005615.16	Pcyt1a	chr16	protein_coding	phosphate cytidylyltransferase 1, choline, alpha isoform
chr16	32250256	32270523	+	32249849	32270523	A5SS	0.33	50	50	ENSMUST00000115137.8	ENSMUSG00000005615.16	Pcyt1a	chr16	protein_coding	phosphate cytidylyltransferase 1, choline, alpha isoform
chr16	32250256	32270523	+	32250112	32270523	A5SS	0.33	50	50	ENSMUST00000123199.8	ENSMUSG00000005615.16	Pcyt1a	chr16	protein_coding	phosphate cytidylyltransferase 1, choline, alpha isoform
chr16	32297281	32298468	-	32297281;32297607	32297534;32298468	ES	0.5	50	50	ENSMUST00000042042.9	ENSMUSG00000035699.9	Slc51a	chr16	protein_coding	solute carrier family 51, alpha subunit
chr16	32317269;32317447	32317410;32317793	+	32317269	32317793	cassetteExon	0.5	100	100	ENSMUST00000064192.8	ENSMUSG00000052363.9	Zdhhc19	chr16	protein_coding	zinc finger, DHHC domain containing 19
chr16	32315141	32315920	+	32315141	32315807	A3SS	0.5	50	50	ENSMUST00000064192.8	ENSMUSG00000052363.9	Zdhhc19	chr16	protein_coding	zinc finger, DHHC domain containing 19
chr16	32318544	32319654	+	32318544	32324765	A3SS	0.5	50	50	ENSMUST00000064192.8	ENSMUSG00000052363.9	Zdhhc19	chr16	protein_coding	zinc finger, DHHC domain containing 19
chr16	32370724	32371531	+	32369239	32371531	A5SS	0.5	50	50	ENSMUST00000231549.2	ENSMUSG00000116957.2	Gm34680	chr16	lncRNA	predicted gene, 34680
chr16	32428174	32431986	+	32427854	32431986	A5SS	0.5	50	50	ENSMUST00000023486.15	ENSMUSG00000022797.17	Tfrc	chr16	protein_coding	transferrin receptor
chr16	32484774	32488205	+	32484774	32487039	3pMXE	0.5	50	50	ENSMUST00000145627.8	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32463926	32482557	+	32462760	32482557	A5SS	0.2	50	50	ENSMUST00000145627.8	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32463926	32487039	+	32484774	32487039	A5SS&ES	0.5	50	50	ENSMUST00000145627.8	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32475945	32482557	+	32462760	32482557	A5SS	0.2	50	50	ENSMUST00000145627.8	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32477900	32482557	+	32462760	32482557	A5SS	0.2	50	50	ENSMUST00000145627.8	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32480393	32482557	+	32462760	32482557	A5SS	0.2	50	50	ENSMUST00000145627.8	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32463926	32487039	+	32463926	32482557	3pMXE	0.5	50	50	ENSMUST00000124585.2	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32475945	32482557	+	32463926	32482557	A5SS	0.25	50	50	ENSMUST00000124585.2	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32477900	32482557	+	32463926	32482557	A5SS	0.25	50	50	ENSMUST00000124585.2	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32480393	32482557	+	32463926	32482557	A5SS	0.25	50	50	ENSMUST00000124585.2	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32484774	32488205	+	32484774;32487260	32487039;32488205	ES	0.5	50	50	ENSMUST00000115126.9	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32488357	32489610	+	32488357;32489048	32488771;32489610	ES	0.33	50	50	ENSMUST00000115126.9	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32499625	32499970	+	32499625;32499813	32499724;32499970	ES	0.5	50	50	ENSMUST00000115126.9	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32496803;32497531	32497487;32498277	+	32496803	32498277	cassetteExon	0.5	100	100	ENSMUST00000115126.9	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32499625	32499718	+	32499625	32499724	A3SS	0.33	50	50	ENSMUST00000115126.9	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32489034	32489610	+	32489048	32489610	A5SS	0.33	50	50	ENSMUST00000115126.9	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32492053	32494340	+	32490451	32494340	A5SS	0.2	50	50	ENSMUST00000115126.9	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32492098	32494340	+	32490451	32494340	A5SS	0.2	50	50	ENSMUST00000115126.9	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32492098	32496712	+	32494534	32496712	A5SS&ES	0.5	50	50	ENSMUST00000115126.9	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32492228	32494340	+	32490451	32494340	A5SS	0.2	50	50	ENSMUST00000115126.9	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32493345	32494340	+	32490451	32494340	A5SS	0.2	50	50	ENSMUST00000115126.9	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32499625	32499970	+	32499625;32499813	32499718;32499970	ES	0.5	50	50	ENSMUST00000115124.9	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32477900	32482557	+	32475945	32482557	A5SS	0.2	50	50	ENSMUST00000150383.8	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32480393	32482557	+	32475945	32482557	A5SS	0.2	50	50	ENSMUST00000150383.8	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32480393	32482557	+	32477900	32482557	A5SS	0.2	50	50	ENSMUST00000238891.2	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32484774	32488205	+	32487260	32488205	5pMXE	0.5	50	50	ENSMUST00000137044.3	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32488357	32489610	+	32488357;32489034	32488771;32489610	ES	0.33	50	50	ENSMUST00000137044.3	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32492098;32494534	32494340;32496712	+	32492098	32496712	cassetteExon	0.5	100	100	ENSMUST00000115122.9	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32492098	32493185	+	32492098	32496712	A3SS	0.33	50	50	ENSMUST00000115122.9	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32492098;32493345	32493185;32494340	+	32492098	32494340	cassetteExon	0.5	100	100	ENSMUST00000115120.9	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32492053	32494340	+	32492098	32494340	A5SS	0.2	50	50	ENSMUST00000115120.9	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32492228	32494340	+	32492098	32494340	A5SS	0.2	50	50	ENSMUST00000115120.9	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32492053	32494340	+	32492228	32494340	A5SS	0.2	50	50	ENSMUST00000131238.8	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32493345	32494340	+	32492228	32494340	A5SS	0.2	50	50	ENSMUST00000131238.8	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32492053	32494340	+	32493345	32494340	A5SS&ES	0.25	50	50	ENSMUST00000239117.2	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32496803	32498277	+	32496803	32497487	3pMXE	0.5	50	50	ENSMUST00000168506.2	ENSMUSG00000022791.20	Tnk2	chr16	protein_coding	tyrosine kinase, non-receptor, 2
chr16	32597334	32599123	+	32597334;32598103	32598030;32599123	ES	0.5	50	50	ENSMUST00000239554.1	ENSMUSG00000118672.1	Muc4	chr16	protein_coding	mucin 4
chr16	32599193	32599415	+	32599193	32599273	A3SS	0.5	50	50	ENSMUST00000239554.1	ENSMUSG00000118672.1	Muc4	chr16	protein_coding	mucin 4
chr16	32596727	32597161	+	32596288	32597161	A5SS	0.33	50	50	ENSMUST00000239554.1	ENSMUSG00000118672.1	Muc4	chr16	protein_coding	mucin 4
chr16	32596891	32597161	+	32596288	32597161	A5SS	0.33	50	50	ENSMUST00000239554.1	ENSMUSG00000118672.1	Muc4	chr16	protein_coding	mucin 4
chr16	32596891	32597161	+	32596727	32597161	A5SS	0.33	50	50	ENSMUST00000239555.1	ENSMUSG00000118672.1	Muc4	chr16	protein_coding	mucin 4
chr16	32606763	32610470	-	32599520	32610470	A3SS	0.5	50	50	ENSMUST00000115116.8	ENSMUSG00000035638.15	Muc20	chr16	protein_coding	mucin 20
chr16	32677415	32697633	-	32677415	32688463	5pMXE	0.5	50	50	ENSMUST00000115105.9	ENSMUSG00000035629.20	Rubcn	chr16	protein_coding	RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein
chr16	32658723;32661951	32661907;32663368	-	32658723	32663368	cassetteExon	0.5	100	100	ENSMUST00000115105.9	ENSMUSG00000035629.20	Rubcn	chr16	protein_coding	RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein
chr16	32681987	32688463	-	32677415	32688463	A3SS	0.5	50	50	ENSMUST00000115105.9	ENSMUSG00000035629.20	Rubcn	chr16	protein_coding	RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein
chr16	32704622;32708599	32708500;32711635	+	32704622	32711635	cassetteExon	0.5	100	100	ENSMUST00000143151.8	ENSMUSG00000022800.15	Fyttd1	chr16	protein_coding	forty-two-three domain containing 1
chr16	32698366	32704494	+	32698040	32704494	A5SS	0.33	50	50	ENSMUST00000143151.8	ENSMUSG00000022800.15	Fyttd1	chr16	protein_coding	forty-two-three domain containing 1
chr16	32698520	32704494	+	32698040	32704494	A5SS	0.33	50	50	ENSMUST00000143151.8	ENSMUSG00000022800.15	Fyttd1	chr16	protein_coding	forty-two-three domain containing 1
chr16	32719309	32722789	+	32719309;32721077	32721003;32722789	ES	0.5	50	50	ENSMUST00000023489.11	ENSMUSG00000022800.15	Fyttd1	chr16	protein_coding	forty-two-three domain containing 1
chr16	32711783	32717463	+	32711783	32715455	A3SS&ES	0.33	50	50	ENSMUST00000023489.11	ENSMUSG00000022800.15	Fyttd1	chr16	protein_coding	forty-two-three domain containing 1
chr16	32715567	32718771	+	32715567	32718744	A3SS	0.5	50	50	ENSMUST00000023489.11	ENSMUSG00000022800.15	Fyttd1	chr16	protein_coding	forty-two-three domain containing 1
chr16	32698520	32704494	+	32698366	32704494	A5SS	0.33	50	50	ENSMUST00000023489.11	ENSMUSG00000022800.15	Fyttd1	chr16	protein_coding	forty-two-three domain containing 1
chr16	32719309	32725902	+	32719309;32722915	32722789;32725902	ES	0.5	50	50	ENSMUST00000171325.9	ENSMUSG00000022800.15	Fyttd1	chr16	protein_coding	forty-two-three domain containing 1
chr16	32711783	32719248	+	32711783	32715455	A3SS&ES	0.33	50	50	ENSMUST00000231751.2	ENSMUSG00000022800.15	Fyttd1	chr16	protein_coding	forty-two-three domain containing 1
chr16	32711783	32719248	+	32711783	32717463	3pMXE	0.33	50	50	ENSMUST00000145146.8	ENSMUSG00000022800.15	Fyttd1	chr16	protein_coding	forty-two-three domain containing 1
chr16	32718840	32719248	+	32711783	32719248	A5SS	0.5	50	50	ENSMUST00000120345.2	ENSMUSG00000022800.15	Fyttd1	chr16	protein_coding	forty-two-three domain containing 1
chr16	32719309	32721003	+	32719309	32725902	A3SS	0.33	50	50	ENSMUST00000125843.2	ENSMUSG00000022800.15	Fyttd1	chr16	protein_coding	forty-two-three domain containing 1
chr16	32719309	32722789	+	32721077	32722789	5pMXE	0.5	50	50	ENSMUST00000137863.2	ENSMUSG00000022800.15	Fyttd1	chr16	protein_coding	forty-two-three domain containing 1
chr16	32719309	32725902	+	32722915	32725902	5pMXE	0.5	50	50	ENSMUST00000127493.2	ENSMUSG00000022800.15	Fyttd1	chr16	protein_coding	forty-two-three domain containing 1
chr16	32806397	32808801	+	32806397;32807258	32807109;32808801	ES	0.5	50	50	ENSMUST00000023491.13	ENSMUSG00000022801.14	Lrch3	chr16	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 3
chr16	32815366	32817752	+	32815366;32816283	32816176;32817752	ES	0.5	50	50	ENSMUST00000023491.13	ENSMUSG00000022801.14	Lrch3	chr16	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 3
chr16	32826111;32829806	32829559;32832711	+	32826111	32832711	cassetteExon	0.5	100	100	ENSMUST00000023491.13	ENSMUSG00000022801.14	Lrch3	chr16	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 3
chr16	32775313	32775670	+	32772553	32775670	A5SS	0.33	50	50	ENSMUST00000023491.13	ENSMUSG00000022801.14	Lrch3	chr16	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 3
chr16	32799830	32802198	+	32799914	32802198	A5SS	0.5	50	50	ENSMUST00000023491.13	ENSMUSG00000022801.14	Lrch3	chr16	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 3
chr16	32815381	32816176	+	32815366	32816176	A5SS	0.5	50	50	ENSMUST00000023491.13	ENSMUSG00000022801.14	Lrch3	chr16	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 3
chr16	32734773	32779765	+	32734773;32775775	32775670;32779765	ES	0.5	50	50	ENSMUST00000164486.8	ENSMUSG00000022801.14	Lrch3	chr16	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 3
chr16	32734773	32770662	+	32734773	32775670	A3SS	0.33	50	50	ENSMUST00000164486.8	ENSMUSG00000022801.14	Lrch3	chr16	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 3
chr16	32772553	32775670	+	32734773	32775670	A5SS	0.33	50	50	ENSMUST00000164486.8	ENSMUSG00000022801.14	Lrch3	chr16	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 3
chr16	32775313	32775670	+	32734773	32775670	A5SS	0.33	50	50	ENSMUST00000164486.8	ENSMUSG00000022801.14	Lrch3	chr16	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 3
chr16	32734773	32770662	+	32734773	32779765	A3SS	0.33	50	50	ENSMUST00000165616.8	ENSMUSG00000022801.14	Lrch3	chr16	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 3
chr16	32815366	32817752	+	32816283	32817752	A5SS&ES	0.5	50	50	ENSMUST00000142290.3	ENSMUSG00000022801.14	Lrch3	chr16	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 3
chr16	32841015	32851145	-	32841015;32849459	32849385;32851145	ES	0.5	50	50	ENSMUST00000115100.9	ENSMUSG00000035578.17	Iqcg	chr16	protein_coding	IQ motif containing G
chr16	32841015	32844214	-	32841015	32849385	A5SS	0.33	50	50	ENSMUST00000115100.9	ENSMUSG00000035578.17	Iqcg	chr16	protein_coding	IQ motif containing G
chr16	32870483	32873915	-	32870483	32873994	A5SS	0.5	50	50	ENSMUST00000115100.9	ENSMUSG00000035578.17	Iqcg	chr16	protein_coding	IQ motif containing G
chr16	32841015	32844214	-	32841015	32851145	A5SS	0.33	50	50	ENSMUST00000231235.2	ENSMUSG00000035578.17	Iqcg	chr16	protein_coding	IQ motif containing G
chr16	32876925	32877506	+	32876880	32877506	A5SS	0.25	50	50	ENSMUST00000078804.12	ENSMUSG00000060636.15	Rpl35a	chr16	protein_coding	ribosomal protein L35A
chr16	32876987	32877506	+	32876880	32877506	A5SS	0.25	50	50	ENSMUST00000078804.12	ENSMUSG00000060636.15	Rpl35a	chr16	protein_coding	ribosomal protein L35A
chr16	32877275	32877506	+	32876880	32877506	A5SS	0.25	50	50	ENSMUST00000078804.12	ENSMUSG00000060636.15	Rpl35a	chr16	protein_coding	ribosomal protein L35A
chr16	32877535	32877760	+	32877548	32877760	A5SS	0.5	50	50	ENSMUST00000078804.12	ENSMUSG00000060636.15	Rpl35a	chr16	protein_coding	ribosomal protein L35A
chr16	32876987	32877506	+	32876925	32877506	A5SS	0.25	50	50	ENSMUST00000115079.8	ENSMUSG00000060636.15	Rpl35a	chr16	protein_coding	ribosomal protein L35A
chr16	32877275	32877506	+	32876925	32877506	A5SS	0.25	50	50	ENSMUST00000115079.8	ENSMUSG00000060636.15	Rpl35a	chr16	protein_coding	ribosomal protein L35A
chr16	32877275	32877506	+	32876987	32877506	A5SS	0.25	50	50	ENSMUST00000115078.8	ENSMUSG00000060636.15	Rpl35a	chr16	protein_coding	ribosomal protein L35A
chr16	33200749	33200886	-	33200728	33200886	A3SS	0.5	50	50	ENSMUST00000231849.2	ENSMUSG00000097318.3	1700007L15Rik	chr16	lncRNA	RIKEN cDNA 1700007L15 gene
chr16	33255344	33287225	+	33255344;33277371	33277246;33287225	ES	0.5	50	50	ENSMUST00000165418.9	ENSMUSG00000022811.18	Zfp148	chr16	protein_coding	zinc finger protein 148
chr16	33201673	33241691	+	33201397	33241691	A5SS	0.25	50	50	ENSMUST00000165418.9	ENSMUSG00000022811.18	Zfp148	chr16	protein_coding	zinc finger protein 148
chr16	33202252	33241691	+	33201397	33241691	A5SS	0.25	50	50	ENSMUST00000165418.9	ENSMUSG00000022811.18	Zfp148	chr16	protein_coding	zinc finger protein 148
chr16	33220928	33241691	+	33201397	33241691	A5SS	0.25	50	50	ENSMUST00000165418.9	ENSMUSG00000022811.18	Zfp148	chr16	protein_coding	zinc finger protein 148
chr16	33202252	33241691	+	33201673	33241691	A5SS	0.25	50	50	ENSMUST00000231894.2	ENSMUSG00000022811.18	Zfp148	chr16	protein_coding	zinc finger protein 148
chr16	33220928	33241691	+	33201673	33241691	A5SS	0.25	50	50	ENSMUST00000231894.2	ENSMUSG00000022811.18	Zfp148	chr16	protein_coding	zinc finger protein 148
chr16	33220928	33241691	+	33202252	33241691	A5SS	0.25	50	50	ENSMUST00000231732.2	ENSMUSG00000022811.18	Zfp148	chr16	protein_coding	zinc finger protein 148
chr16	33428602	33444924	+	33428602;33437624	33437478;33444924	ES	0.5	50	50	ENSMUST00000121925.8	ENSMUSG00000035506.17	Slc12a8	chr16	protein_coding	solute carrier family 12 (potassium/chloride transporters), member 8
chr16	33437624	33445002	+	33437624	33444924	A3SS	0.5	50	50	ENSMUST00000121925.8	ENSMUSG00000035506.17	Slc12a8	chr16	protein_coding	solute carrier family 12 (potassium/chloride transporters), member 8
chr16	33339043	33355234	+	33338746	33355234	A5SS	0.5	50	50	ENSMUST00000121925.8	ENSMUSG00000035506.17	Slc12a8	chr16	protein_coding	solute carrier family 12 (potassium/chloride transporters), member 8
chr16	33417317	33426536	+	33410735	33426536	A5SS	0.5	50	50	ENSMUST00000121925.8	ENSMUSG00000035506.17	Slc12a8	chr16	protein_coding	solute carrier family 12 (potassium/chloride transporters), member 8
chr16	33437238	33437478	+	33428602	33437478	A5SS	0.5	50	50	ENSMUST00000121925.8	ENSMUSG00000035506.17	Slc12a8	chr16	protein_coding	solute carrier family 12 (potassium/chloride transporters), member 8
chr16	33478683	33483295	+	33478627	33483295	A5SS	0.33	50	50	ENSMUST00000121925.8	ENSMUSG00000035506.17	Slc12a8	chr16	protein_coding	solute carrier family 12 (potassium/chloride transporters), member 8
chr16	33428602	33444924	+	33428602	33437478	A3SS&ES	0.5	50	50	ENSMUST00000122427.8	ENSMUSG00000035506.17	Slc12a8	chr16	protein_coding	solute carrier family 12 (potassium/chloride transporters), member 8
chr16	33467030	33470188	+	33467030	33483295	A3SS	0.5	50	50	ENSMUST00000122427.8	ENSMUSG00000035506.17	Slc12a8	chr16	protein_coding	solute carrier family 12 (potassium/chloride transporters), member 8
chr16	33478627	33483295	+	33467030	33483295	A5SS	0.33	50	50	ENSMUST00000122427.8	ENSMUSG00000035506.17	Slc12a8	chr16	protein_coding	solute carrier family 12 (potassium/chloride transporters), member 8
chr16	33478683	33483295	+	33467030	33483295	A5SS	0.33	50	50	ENSMUST00000122427.8	ENSMUSG00000035506.17	Slc12a8	chr16	protein_coding	solute carrier family 12 (potassium/chloride transporters), member 8
chr16	33541372	33546671	+	33541372;33546013	33545795;33546671	ES	0.5	50	50	ENSMUST00000232568.2	ENSMUSG00000075254.13	Heg1	chr16	protein_coding	heart development protein with EGF-like domains 1
chr16	33505225;33527576	33527286;33530770	+	33505225	33530770	cassetteExon	0.5	100	100	ENSMUST00000232568.2	ENSMUSG00000075254.13	Heg1	chr16	protein_coding	heart development protein with EGF-like domains 1
chr16	33559093	33560529	+	33559093	33562732	A3SS	0.5	50	50	ENSMUST00000232568.2	ENSMUSG00000075254.13	Heg1	chr16	protein_coding	heart development protein with EGF-like domains 1
chr16	33573602	33581128	+	33571579	33581128	A5SS	0.33	50	50	ENSMUST00000232568.2	ENSMUSG00000075254.13	Heg1	chr16	protein_coding	heart development protein with EGF-like domains 1
chr16	33577138	33581128	+	33571579	33581128	A5SS	0.33	50	50	ENSMUST00000232568.2	ENSMUSG00000075254.13	Heg1	chr16	protein_coding	heart development protein with EGF-like domains 1
chr16	33531069	33539877	+	33531069	33545795	A3SS	0.5	50	50	ENSMUST00000152782.8	ENSMUSG00000075254.13	Heg1	chr16	protein_coding	heart development protein with EGF-like domains 1
chr16	33541372	33545795	+	33531069	33545795	A5SS	0.5	50	50	ENSMUST00000152782.8	ENSMUSG00000075254.13	Heg1	chr16	protein_coding	heart development protein with EGF-like domains 1
chr16	33541372	33546671	+	33546013	33546671	A5SS&ES	0.5	50	50	ENSMUST00000152782.8	ENSMUSG00000075254.13	Heg1	chr16	protein_coding	heart development protein with EGF-like domains 1
chr16	33531069;33546013	33545795;33546671	+	33531069;33541372	33539877;33546671	MXE	0.5	100	100	ENSMUST00000126532.2	ENSMUSG00000075254.13	Heg1	chr16	protein_coding	heart development protein with EGF-like domains 1
chr16	33577138	33581128	+	33573602	33581128	A5SS	0.33	50	50	ENSMUST00000152832.2	ENSMUSG00000075254.13	Heg1	chr16	protein_coding	heart development protein with EGF-like domains 1
chr16	33606788	33616115	-	33606788	33607293	5pMXE	0.5	50	50	ENSMUST00000148293.2	ENSMUSG00000090214.9	Gm15657	chr16	lncRNA	predicted gene 15657
chr16	33615287	33616115	-	33606788	33616115	A3SS	0.5	50	50	ENSMUST00000162677.8	ENSMUSG00000090214.9	Gm15657	chr16	lncRNA	predicted gene 15657
chr16	33615287	33616115	-	33615287	33617084	A5SS	0.5	50	50	ENSMUST00000159501.2	ENSMUSG00000090214.9	Gm15657	chr16	lncRNA	predicted gene 15657
chr16	33705491;33714229	33714164;33719611	+	33705491	33719611	cassetteExon	0.5	100	100	ENSMUST00000115028.11	ENSMUSG00000022817.16	Itgb5	chr16	protein_coding	integrin beta 5
chr16	33766980	33769306	+	33766980	33768085	A3SS&ES	0.5	50	50	ENSMUST00000115028.11	ENSMUSG00000022817.16	Itgb5	chr16	protein_coding	integrin beta 5
chr16	33712419	33719611	+	33705491	33719611	A5SS	0.33	50	50	ENSMUST00000115028.11	ENSMUSG00000022817.16	Itgb5	chr16	protein_coding	integrin beta 5
chr16	33742951	33760860	+	33740584	33760860	A5SS	0.5	50	50	ENSMUST00000115028.11	ENSMUSG00000022817.16	Itgb5	chr16	protein_coding	integrin beta 5
chr16	33768222	33769027	+	33768251	33769027	A5SS	0.5	50	50	ENSMUST00000115028.11	ENSMUSG00000022817.16	Itgb5	chr16	protein_coding	integrin beta 5
chr16	33712419	33719611	+	33714229	33719611	A5SS&ES	0.33	50	50	ENSMUST00000134262.8	ENSMUSG00000022817.16	Itgb5	chr16	protein_coding	integrin beta 5
chr16	33782610	33787196	-	33782610;33784295	33784142;33787196	ES	0.5	50	50	ENSMUST00000023510.7	ENSMUSG00000022814.7	Umps	chr16	protein_coding	uridine monophosphate synthetase
chr16	33860379	33873930	-	33860379;33870292	33870200;33873930	ES	0.5	50	50	ENSMUST00000114973.9	ENSMUSG00000061751.17	Kalrn	chr16	protein_coding	kalirin, RhoGEF kinase
chr16	33875485	33936592	-	33875485	33916166	5pMXE	0.5	50	50	ENSMUST00000114973.9	ENSMUSG00000061751.17	Kalrn	chr16	protein_coding	kalirin, RhoGEF kinase
chr16	33830308	33830892	-	33829699	33830892	A3SS	0.5	50	50	ENSMUST00000114973.9	ENSMUSG00000061751.17	Kalrn	chr16	protein_coding	kalirin, RhoGEF kinase
chr16	33834046	33834328	-	33831015	33834328	A3SS	0.33	50	50	ENSMUST00000114973.9	ENSMUSG00000061751.17	Kalrn	chr16	protein_coding	kalirin, RhoGEF kinase
chr16	33834051	33834328	-	33831015	33834328	A3SS	0.33	50	50	ENSMUST00000114973.9	ENSMUSG00000061751.17	Kalrn	chr16	protein_coding	kalirin, RhoGEF kinase
chr16	33834581	33836762	-	33834584	33836762	A3SS	0.5	50	50	ENSMUST00000114973.9	ENSMUSG00000061751.17	Kalrn	chr16	protein_coding	kalirin, RhoGEF kinase
chr16	34212479	34334284	-	34212479	34277251	5pMXE	0.33	50	50	ENSMUST00000076810.12	ENSMUSG00000061751.17	Kalrn	chr16	protein_coding	kalirin, RhoGEF kinase
chr16	34212479	34393477	-	34212479	34277251	5pMXE	0.33	50	50	ENSMUST00000076810.12	ENSMUSG00000061751.17	Kalrn	chr16	protein_coding	kalirin, RhoGEF kinase
chr16	33973875	33991642	-	33936835	33991642	A3SS	0.5	50	50	ENSMUST00000076810.12	ENSMUSG00000061751.17	Kalrn	chr16	protein_coding	kalirin, RhoGEF kinase
chr16	34040644	34047397	-	34040617	34047397	A3SS	0.5	50	50	ENSMUST00000076810.12	ENSMUSG00000061751.17	Kalrn	chr16	protein_coding	kalirin, RhoGEF kinase
chr16	34064926	34072595	-	34064336	34072595	A3SS	0.5	50	50	ENSMUST00000076810.12	ENSMUSG00000061751.17	Kalrn	chr16	protein_coding	kalirin, RhoGEF kinase
chr16	33936835	33983437	-	33936835	33991642	A5SS	0.5	50	50	ENSMUST00000076810.12	ENSMUSG00000061751.17	Kalrn	chr16	protein_coding	kalirin, RhoGEF kinase
chr16	34072769	34076561	-	34072769	34076522	A5SS	0.5	50	50	ENSMUST00000076810.12	ENSMUSG00000061751.17	Kalrn	chr16	protein_coding	kalirin, RhoGEF kinase
chr16	34083189	34083540	-	34083189	34114488	A5SS	0.5	50	50	ENSMUST00000076810.12	ENSMUSG00000061751.17	Kalrn	chr16	protein_coding	kalirin, RhoGEF kinase
chr16	34181379	34182120	-	34181379	34205655	A5SS	0.5	50	50	ENSMUST00000076810.12	ENSMUSG00000061751.17	Kalrn	chr16	protein_coding	kalirin, RhoGEF kinase
chr16	33834046	33834328	-	33834051	33834328	A3SS	0.33	50	50	ENSMUST00000114966.8	ENSMUSG00000061751.17	Kalrn	chr16	protein_coding	kalirin, RhoGEF kinase
chr16	33860379	33873930	-	33870292	33873930	3pMXE	0.5	50	50	ENSMUST00000114961.8	ENSMUSG00000061751.17	Kalrn	chr16	protein_coding	kalirin, RhoGEF kinase
chr16	34212479	34334284	-	34212479	34393477	A5SS	0.33	50	50	ENSMUST00000114961.8	ENSMUSG00000061751.17	Kalrn	chr16	protein_coding	kalirin, RhoGEF kinase
chr16	34333439	34334284	-	34212479	34334284	A3SS	0.5	50	50	ENSMUST00000114960.9	ENSMUSG00000061751.17	Kalrn	chr16	protein_coding	kalirin, RhoGEF kinase
chr16	34471645	34487054	+	34470391	34487054	A5SS	0.5	50	50	ENSMUST00000148562.8	ENSMUSG00000022832.12	Ropn1	chr16	protein_coding	ropporin, rhophilin associated protein 1
chr16	34542027	34542107	+	34542017	34542107	A5SS	0.5	50	50	ENSMUST00000231364.2	ENSMUSG00000022833.8	Ccdc14	chr16	protein_coding	coiled-coil domain containing 14
chr16	34605397	34635805	+	34565740	34635805	A5SS	0.5	50	50	ENSMUST00000155268.2	ENSMUSG00000022836.12	Mylk	chr16	protein_coding	myosin, light polypeptide kinase
chr16	34720694	34732517	+	34719883	34732517	A5SS	0.33	50	50	ENSMUST00000023538.9	ENSMUSG00000022836.12	Mylk	chr16	protein_coding	myosin, light polypeptide kinase
chr16	34725582	34732517	+	34719883	34732517	A5SS	0.33	50	50	ENSMUST00000023538.9	ENSMUSG00000022836.12	Mylk	chr16	protein_coding	myosin, light polypeptide kinase
chr16	34750789	34759296	+	34750320	34759296	A5SS	0.5	50	50	ENSMUST00000023538.9	ENSMUSG00000022836.12	Mylk	chr16	protein_coding	myosin, light polypeptide kinase
chr16	34773642	34773949	+	34773199	34773949	A5SS	0.5	50	50	ENSMUST00000023538.9	ENSMUSG00000022836.12	Mylk	chr16	protein_coding	myosin, light polypeptide kinase
chr16	34814700	34815444	+	34809375	34815444	A5SS	0.5	50	50	ENSMUST00000023538.9	ENSMUSG00000022836.12	Mylk	chr16	protein_coding	myosin, light polypeptide kinase
chr16	34725582	34732517	+	34720694	34732517	A5SS	0.33	50	50	ENSMUST00000232482.2	ENSMUSG00000022836.12	Mylk	chr16	protein_coding	myosin, light polypeptide kinase
chr16	34775594	34776741	-	34763977	34776741	A3SS	0.5	50	50	ENSMUST00000231694.2	ENSMUSG00000116665.2	E130310I04Rik	chr16	lncRNA	RIKEN cDNA E130310I04 gene
chr16	34824639	34838978	-	34824639	34824766	5pMXE	0.5	50	50	ENSMUST00000232548.2	ENSMUSG00000116840.2	Gm21691	chr16	lncRNA	predicted gene, 21691
chr16	34821254	34824576	-	34821254	34824289	A5SS	0.5	50	50	ENSMUST00000232548.2	ENSMUSG00000116840.2	Gm21691	chr16	lncRNA	predicted gene, 21691
chr16	34821254	34824576	-	34821254;34824337	34824289;34824576	ES	0.5	50	50	ENSMUST00000232649.2	ENSMUSG00000116840.2	Gm21691	chr16	lncRNA	predicted gene, 21691
chr16	35134657	35149868	-	35134657;35139239	35139174;35149868	ES	0.5	50	50	ENSMUST00000043521.5	ENSMUSG00000034473.15	Sec22a	chr16	protein_coding	SEC22 homolog A, vesicle trafficking protein
chr16	35139239	35167969	-	35139239;35149983	35149868;35167969	ES	0.5	50	50	ENSMUST00000043521.5	ENSMUSG00000034473.15	Sec22a	chr16	protein_coding	SEC22 homolog A, vesicle trafficking protein
chr16	35181751	35181931	-	35169364	35181931	A3SS	0.5	50	50	ENSMUST00000043521.5	ENSMUSG00000034473.15	Sec22a	chr16	protein_coding	SEC22 homolog A, vesicle trafficking protein
chr16	35182129	35183845	-	35182129	35184194	A5SS	0.5	50	50	ENSMUST00000043521.5	ENSMUSG00000034473.15	Sec22a	chr16	protein_coding	SEC22 homolog A, vesicle trafficking protein
chr16	35134657;35149983	35149868;35167969	-	35134657;35139239	35139174;35167969	MXE	0.5	100	100	ENSMUST00000154064.3	ENSMUSG00000034473.15	Sec22a	chr16	protein_coding	SEC22 homolog A, vesicle trafficking protein
chr16	35230805	35231297	-	35230824	35231297	A3SS	0.5	50	50	ENSMUST00000023550.9	ENSMUSG00000022844.9	Pdia5	chr16	protein_coding	protein disulfide isomerase associated 5
chr16	35231367	35233375	-	35231367	35243236	A5SS	0.5	50	50	ENSMUST00000023550.9	ENSMUSG00000022844.9	Pdia5	chr16	protein_coding	protein disulfide isomerase associated 5
chr16	35287027	35292935	-	35287027	35311099	A5SS	0.5	50	50	ENSMUST00000023550.9	ENSMUSG00000022844.9	Pdia5	chr16	protein_coding	protein disulfide isomerase associated 5
chr16	35483268	35484883	+	35483268	35483487	3pMXE	0.5	50	50	ENSMUST00000120756.8	ENSMUSG00000052133.17	Sema5b	chr16	protein_coding	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B
chr16	35481832	35481939	+	35481832	35481936	A3SS	0.5	50	50	ENSMUST00000120756.8	ENSMUSG00000052133.17	Sema5b	chr16	protein_coding	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B
chr16	35481769	35481936	+	35481832	35481936	A5SS	0.5	50	50	ENSMUST00000120756.8	ENSMUSG00000052133.17	Sema5b	chr16	protein_coding	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B
chr16	35556021	35589269	-	35556021;35570959	35570866;35589269	ES	0.5	50	50	ENSMUST00000023554.9	ENSMUSG00000022848.9	Slc49a4	chr16	protein_coding	solute carrier family 49 member 4
chr16	35634424;35634779	35634700;35637522	+	35634424	35637522	cassetteExon	0.5	100	100	ENSMUST00000231579.2	ENSMUSG00000022849.6	Hspbap1	chr16	protein_coding	Hspb associated protein 1
chr16	35761505	35767871	+	35761505;35763772	35763739;35767871	ES	0.25	50	50	ENSMUST00000114878.8	ENSMUSG00000022906.16	Parp9	chr16	protein_coding	poly (ADP-ribose) polymerase family, member 9
chr16	35763772;35766322	35766139;35767871	+	35763772	35767871	cassetteExon	0.5	100	100	ENSMUST00000114878.8	ENSMUSG00000022906.16	Parp9	chr16	protein_coding	poly (ADP-ribose) polymerase family, member 9
chr16	35774148;35775474	35775324;35777177	+	35774148	35777177	cassetteExon	0.5	100	100	ENSMUST00000114878.8	ENSMUSG00000022906.16	Parp9	chr16	protein_coding	poly (ADP-ribose) polymerase family, member 9
chr16	35759576	35761403	+	35759430	35761403	A5SS	0.5	50	50	ENSMUST00000114878.8	ENSMUSG00000022906.16	Parp9	chr16	protein_coding	poly (ADP-ribose) polymerase family, member 9
chr16	35763880	35767871	+	35763772	35767871	A5SS	0.25	50	50	ENSMUST00000114878.8	ENSMUSG00000022906.16	Parp9	chr16	protein_coding	poly (ADP-ribose) polymerase family, member 9
chr16	35761505;35763880	35763739;35767871	+	35761505	35767871	cassetteExon	0.5	100	100	ENSMUST00000023622.13	ENSMUSG00000022906.16	Parp9	chr16	protein_coding	poly (ADP-ribose) polymerase family, member 9
chr16	35766322	35767871	+	35761505	35767871	A5SS	0.25	50	50	ENSMUST00000023622.13	ENSMUSG00000022906.16	Parp9	chr16	protein_coding	poly (ADP-ribose) polymerase family, member 9
chr16	35763880;35766322	35766139;35767871	+	35763880	35767871	cassetteExon	0.5	100	100	ENSMUST00000114877.8	ENSMUSG00000022906.16	Parp9	chr16	protein_coding	poly (ADP-ribose) polymerase family, member 9
chr16	35761505	35767871	+	35761505	35763739	3pMXE	0.5	50	50	ENSMUST00000128878.8	ENSMUSG00000022906.16	Parp9	chr16	protein_coding	poly (ADP-ribose) polymerase family, member 9
chr16	35763772	35766139	+	35763880	35766139	A5SS	0.5	50	50	ENSMUST00000122870.2	ENSMUSG00000022906.16	Parp9	chr16	protein_coding	poly (ADP-ribose) polymerase family, member 9
chr16	35763772	35767871	+	35766322	35767871	A5SS&ES	0.25	50	50	ENSMUST00000122870.2	ENSMUSG00000022906.16	Parp9	chr16	protein_coding	poly (ADP-ribose) polymerase family, member 9
chr16	35763880	35767871	+	35766322	35767871	A5SS&ES	0.25	50	50	ENSMUST00000153066.2	ENSMUSG00000022906.16	Parp9	chr16	protein_coding	poly (ADP-ribose) polymerase family, member 9
chr16	35787890	35802095	-	35787890	35801094	5pMXE	0.5	50	50	ENSMUST00000174085.8	ENSMUSG00000086324.9	Gm15564	chr16	lncRNA	predicted gene 15564
chr16	35787887	35801094	-	35787890	35801094	A3SS	0.5	50	50	ENSMUST00000174085.8	ENSMUSG00000086324.9	Gm15564	chr16	lncRNA	predicted gene 15564
chr16	35820685	35823213	+	35799220	35823213	A5SS	0.5	50	50	ENSMUST00000172991.2	ENSMUSG00000022905.13	Kpna1	chr16	protein_coding	karyopherin (importin) alpha 1
chr16	35833357;35836379	35836257;35839628	+	35833357	35839628	cassetteExon	0.5	100	100	ENSMUST00000004054.13	ENSMUSG00000022905.13	Kpna1	chr16	protein_coding	karyopherin (importin) alpha 1
chr16	35833357	35834231	+	35833357	35839628	A3SS	0.33	50	50	ENSMUST00000004054.13	ENSMUSG00000022905.13	Kpna1	chr16	protein_coding	karyopherin (importin) alpha 1
chr16	35804030	35820552	+	35803878	35820552	A5SS	0.5	50	50	ENSMUST00000004054.13	ENSMUSG00000022905.13	Kpna1	chr16	protein_coding	karyopherin (importin) alpha 1
chr16	35833357	35836257	+	35833357;35834272	35834231;35836257	ES	0.33	50	50	ENSMUST00000174500.8	ENSMUSG00000022905.13	Kpna1	chr16	protein_coding	karyopherin (importin) alpha 1
chr16	35834595	35836257	+	35834272	35836257	A5SS	0.33	50	50	ENSMUST00000174500.8	ENSMUSG00000022905.13	Kpna1	chr16	protein_coding	karyopherin (importin) alpha 1
chr16	35829785	35841058	+	35829785	35833263	3pMXE	0.5	50	50	ENSMUST00000173555.8	ENSMUSG00000022905.13	Kpna1	chr16	protein_coding	karyopherin (importin) alpha 1
chr16	35833357;35834595	35834231;35836257	+	35833357	35836257	cassetteExon	0.5	100	100	ENSMUST00000173696.8	ENSMUSG00000022905.13	Kpna1	chr16	protein_coding	karyopherin (importin) alpha 1
chr16	35840614	35841058	+	35829785	35841058	A5SS	0.5	50	50	ENSMUST00000174737.2	ENSMUSG00000022905.13	Kpna1	chr16	protein_coding	karyopherin (importin) alpha 1
chr16	35833357	35836257	+	35834595	35836257	5pMXE	0.33	50	50	ENSMUST00000172534.8	ENSMUSG00000022905.13	Kpna1	chr16	protein_coding	karyopherin (importin) alpha 1
chr16	35842018	35843545	+	35842018	35853622	A3SS	0.5	50	50	ENSMUST00000173641.2	ENSMUSG00000022905.13	Kpna1	chr16	protein_coding	karyopherin (importin) alpha 1
chr16	35851667	35853622	+	35842018	35853622	A5SS	0.5	50	50	ENSMUST00000173641.2	ENSMUSG00000022905.13	Kpna1	chr16	protein_coding	karyopherin (importin) alpha 1
chr16	35864461	35870212	-	35864461;35866857	35866749;35870212	ES	0.5	50	50	ENSMUST00000004057.9	ENSMUSG00000003955.9	Fam162a	chr16	protein_coding	family with sequence similarity 162, member A
chr16	35866857	35872656	-	35866857;35870320	35870212;35872656	ES	0.5	50	50	ENSMUST00000004057.9	ENSMUSG00000003955.9	Fam162a	chr16	protein_coding	family with sequence similarity 162, member A
chr16	35872778	35891687	-	35872778	35891840	A5SS	0.5	50	50	ENSMUST00000004057.9	ENSMUSG00000003955.9	Fam162a	chr16	protein_coding	family with sequence similarity 162, member A
chr16	35864461;35866857	35866749;35872656	-	35864461;35870320	35870212;35872656	MXE	0.5	100	100	ENSMUST00000232390.2	ENSMUSG00000003955.9	Fam162a	chr16	protein_coding	family with sequence similarity 162, member A
chr16	35892507	35905387	+	35892507;35903186	35903061;35905387	ES	0.5	50	50	ENSMUST00000164916.9	ENSMUSG00000075229.12	Ccdc58	chr16	protein_coding	coiled-coil domain containing 58
chr16	35901773	35903061	+	35892507	35903061	A5SS	0.5	50	50	ENSMUST00000164916.9	ENSMUSG00000075229.12	Ccdc58	chr16	protein_coding	coiled-coil domain containing 58
chr16	35909633	35910271	+	35905533	35910271	A5SS	0.25	50	50	ENSMUST00000164916.9	ENSMUSG00000075229.12	Ccdc58	chr16	protein_coding	coiled-coil domain containing 58
chr16	35909812	35910271	+	35905533	35910271	A5SS	0.25	50	50	ENSMUST00000164916.9	ENSMUSG00000075229.12	Ccdc58	chr16	protein_coding	coiled-coil domain containing 58
chr16	35892507	35910271	+	35892507;35905533	35905387;35910271	ES	0.25	50	50	ENSMUST00000163352.9	ENSMUSG00000075229.12	Ccdc58	chr16	protein_coding	coiled-coil domain containing 58
chr16	35892507	35903061	+	35892507	35910271	A3SS	0.33	50	50	ENSMUST00000231468.2	ENSMUSG00000075229.12	Ccdc58	chr16	protein_coding	coiled-coil domain containing 58
chr16	35909633	35910271	+	35892507	35910271	A5SS	0.25	50	50	ENSMUST00000231468.2	ENSMUSG00000075229.12	Ccdc58	chr16	protein_coding	coiled-coil domain containing 58
chr16	35909812	35910271	+	35892507	35910271	A5SS	0.25	50	50	ENSMUST00000231468.2	ENSMUSG00000075229.12	Ccdc58	chr16	protein_coding	coiled-coil domain containing 58
chr16	35909812	35910271	+	35909633	35910271	A5SS	0.25	50	50	ENSMUST00000231773.2	ENSMUSG00000075229.12	Ccdc58	chr16	protein_coding	coiled-coil domain containing 58
chr16	35942739	35951355	-	35942739;35945445	35945344;35951355	ES	0.5	50	50	ENSMUST00000096090.3	ENSMUSG00000034362.8	Csta1	chr16	protein_coding	cystatin A1
chr16	36042016	36073384	+	36042016;36059255	36059194;36073384	ES	0.5	50	50	ENSMUST00000187183.7	ENSMUSG00000095620.8	Csta2	chr16	protein_coding	cystatin A family member 2
chr16	36101022	36105532	+	36100929	36105532	A5SS	0.5	50	50	ENSMUST00000232150.2	ENSMUSG00000071562.7	Stfa1	chr16	protein_coding	stefin A1
chr16	36179947	36184480	-	36179947	36184574	A5SS	0.5	50	50	ENSMUST00000096089.3	ENSMUSG00000071561.3	Cstdc5	chr16	protein_coding	cystatin domain containing 5
chr16	36318075;36320769	36320539;36329956	-	36318075	36329956	cassetteExon	0.5	100	100	ENSMUST00000114847.9	ENSMUSG00000051980.14	Casr	chr16	protein_coding	calcium-sensing receptor
chr16	36338390	36381792	-	36338390	36382216	A5SS	0.5	50	50	ENSMUST00000114847.9	ENSMUSG00000051980.14	Casr	chr16	protein_coding	calcium-sensing receptor
chr16	36400600	36400843	-	36400600	36400714	A5SS	0.5	50	50	ENSMUST00000231896.2	ENSMUSG00000116961.2	Gm49662	chr16	lncRNA	predicted gene, 49662
chr16	36481976	36486310	-	36449381	36486310	A3SS	0.5	50	50	ENSMUST00000089620.11	ENSMUSG00000022901.14	Cd86	chr16	protein_coding	CD86 antigen
chr16	36449381	36462891	-	36449381	36486310	A5SS	0.5	50	50	ENSMUST00000089620.11	ENSMUSG00000022901.14	Cd86	chr16	protein_coding	CD86 antigen
chr16	36536615	36542245	+	36536615;36542031	36541900;36542245	ES	0.5	50	50	ENSMUST00000023617.13	ENSMUSG00000022900.15	Ildr1	chr16	protein_coding	immunoglobulin-like domain containing receptor 1
chr16	36536615	36541798	+	36536615	36541900	A3SS	0.33	50	50	ENSMUST00000023617.13	ENSMUSG00000022900.15	Ildr1	chr16	protein_coding	immunoglobulin-like domain containing receptor 1
chr16	36535963	36536469	+	36535982	36536469	A5SS	0.5	50	50	ENSMUST00000023617.13	ENSMUSG00000022900.15	Ildr1	chr16	protein_coding	immunoglobulin-like domain containing receptor 1
chr16	36543000	36545879	+	36543041	36545879	A5SS	0.5	50	50	ENSMUST00000023617.13	ENSMUSG00000022900.15	Ildr1	chr16	protein_coding	immunoglobulin-like domain containing receptor 1
chr16	36536615;36542031	36541798;36542245	+	36536615	36542245	cassetteExon	0.5	100	100	ENSMUST00000089618.10	ENSMUSG00000022900.15	Ildr1	chr16	protein_coding	immunoglobulin-like domain containing receptor 1
chr16	36592503	36594904	-	36592503;36592874	36592784;36594904	ES	0.5	50	50	ENSMUST00000023616.11	ENSMUSG00000022899.11	Slc15a2	chr16	protein_coding	solute carrier family 15 (H+/peptide transporter), member 2
chr16	36595003	36601928	-	36595003;36596052	36595960;36601928	ES	0.5	50	50	ENSMUST00000023616.11	ENSMUSG00000022899.11	Slc15a2	chr16	protein_coding	solute carrier family 15 (H+/peptide transporter), member 2
chr16	36582074	36582185	-	36582015	36582185	A3SS	0.5	50	50	ENSMUST00000023616.11	ENSMUSG00000022899.11	Slc15a2	chr16	protein_coding	solute carrier family 15 (H+/peptide transporter), member 2
chr16	36574914	36575171	-	36574914	36576412	A5SS	0.5	50	50	ENSMUST00000023616.11	ENSMUSG00000022899.11	Slc15a2	chr16	protein_coding	solute carrier family 15 (H+/peptide transporter), member 2
chr16	36582749	36583660	-	36582749	36592426	A5SS	0.5	50	50	ENSMUST00000023616.11	ENSMUSG00000022899.11	Slc15a2	chr16	protein_coding	solute carrier family 15 (H+/peptide transporter), member 2
chr16	36602069	36602634	-	36578223	36602634	A3SS	0.5	50	50	ENSMUST00000165380.8	ENSMUSG00000022899.11	Slc15a2	chr16	protein_coding	solute carrier family 15 (H+/peptide transporter), member 2
chr16	36578223	36579588	-	36578223	36602634	A5SS	0.5	50	50	ENSMUST00000165380.8	ENSMUSG00000022899.11	Slc15a2	chr16	protein_coding	solute carrier family 15 (H+/peptide transporter), member 2
chr16	36592503	36594904	-	36592503	36592784	5pMXE	0.5	50	50	ENSMUST00000166399.3	ENSMUSG00000022899.11	Slc15a2	chr16	protein_coding	solute carrier family 15 (H+/peptide transporter), member 2
chr16	36628522	36630834	-	36628522	36628985	5pMXE	0.33	50	50	ENSMUST00000114825.3	ENSMUSG00000022838.15	Eaf2	chr16	protein_coding	ELL associated factor 2
chr16	36628522	36648413	-	36628522	36628985	5pMXE	0.33	50	50	ENSMUST00000114825.3	ENSMUSG00000022838.15	Eaf2	chr16	protein_coding	ELL associated factor 2
chr16	36621064	36628377	-	36621206	36628377	A3SS	0.5	50	50	ENSMUST00000114825.3	ENSMUSG00000022838.15	Eaf2	chr16	protein_coding	ELL associated factor 2
chr16	36628522	36648413	-	36628522	36630834	A5SS&ES	0.33	50	50	ENSMUST00000075946.12	ENSMUSG00000022838.15	Eaf2	chr16	protein_coding	ELL associated factor 2
chr16	36645114	36648413	-	36645114	36694990	A5SS	0.5	50	50	ENSMUST00000075946.12	ENSMUSG00000022838.15	Eaf2	chr16	protein_coding	ELL associated factor 2
chr16	36645114	36648413	-	36628522	36648413	A3SS	0.5	50	50	ENSMUST00000147053.2	ENSMUSG00000022838.15	Eaf2	chr16	protein_coding	ELL associated factor 2
chr16	36648801	36649366	+	36648854	36649366	A5SS	0.5	50	50	ENSMUST00000146272.2	ENSMUSG00000022837.15	Iqcb1	chr16	protein_coding	IQ calmodulin-binding motif containing 1
chr16	36649435	36651864	+	36649635	36651864	A5SS	0.5	50	50	ENSMUST00000146272.2	ENSMUSG00000022837.15	Iqcb1	chr16	protein_coding	IQ calmodulin-binding motif containing 1
chr16	36668021	36671547	+	36668021;36670098	36669989;36671547	ES	0.5	50	50	ENSMUST00000114819.8	ENSMUSG00000022837.15	Iqcb1	chr16	protein_coding	IQ calmodulin-binding motif containing 1
chr16	36651976	36652291	+	36651976	36652191	A3SS	0.5	50	50	ENSMUST00000114819.8	ENSMUSG00000022837.15	Iqcb1	chr16	protein_coding	IQ calmodulin-binding motif containing 1
chr16	36678965	36679724	+	36678965	36687921	A3SS	0.5	50	50	ENSMUST00000114819.8	ENSMUSG00000022837.15	Iqcb1	chr16	protein_coding	IQ calmodulin-binding motif containing 1
chr16	36672030	36676653	+	36671656	36676653	A5SS	0.5	50	50	ENSMUST00000114819.8	ENSMUSG00000022837.15	Iqcb1	chr16	protein_coding	IQ calmodulin-binding motif containing 1
chr16	36668021	36671547	+	36668021	36669989	A3SS	0.5	50	50	ENSMUST00000137076.2	ENSMUSG00000022837.15	Iqcb1	chr16	protein_coding	IQ calmodulin-binding motif containing 1
chr16	36695625;36706590	36706493;36707601	+	36695625;36705550	36705373;36707601	MXE	0.5	100	100	ENSMUST00000135800.2	ENSMUSG00000034243.18	Golgb1	chr16	protein_coding	golgi autoantigen, golgin subfamily b, macrogolgin 1
chr16	36705550;36706590	36706493;36707601	+	36705550	36707601	cassetteExon	0.5	100	100	ENSMUST00000135800.2	ENSMUSG00000034243.18	Golgb1	chr16	protein_coding	golgi autoantigen, golgin subfamily b, macrogolgin 1
chr16	36695625	36706493	+	36695625;36705550	36705373;36706493	ES	0.5	50	50	ENSMUST00000114812.9	ENSMUSG00000034243.18	Golgb1	chr16	protein_coding	golgi autoantigen, golgin subfamily b, macrogolgin 1
chr16	36711854;36713800	36713678;36715193	+	36711854	36715193	cassetteExon	0.5	100	100	ENSMUST00000114812.9	ENSMUSG00000034243.18	Golgb1	chr16	protein_coding	golgi autoantigen, golgin subfamily b, macrogolgin 1
chr16	36705550	36707601	+	36706590	36707601	5pMXE	0.5	50	50	ENSMUST00000039855.9	ENSMUSG00000034243.18	Golgb1	chr16	protein_coding	golgi autoantigen, golgin subfamily b, macrogolgin 1
chr16	36769026	36775622	+	36769026;36771549	36771495;36775622	ES	0.5	50	50	ENSMUST00000023531.15	ENSMUSG00000022831.15	Hcls1	chr16	protein_coding	hematopoietic cell specific Lyn substrate 1
chr16	36786647	36799111	-	36786647;36791105	36789189;36799111	ES	0.5	50	50	ENSMUST00000075869.13	ENSMUSG00000047746.15	Fbxo40	chr16	protein_coding	F-box protein 40
chr16	36791105	36799111	-	36786647	36799111	A3SS	0.5	50	50	ENSMUST00000132511.2	ENSMUSG00000047746.15	Fbxo40	chr16	protein_coding	F-box protein 40
chr16	36786647	36789189	-	36786647	36799111	A5SS	0.5	50	50	ENSMUST00000132511.2	ENSMUSG00000047746.15	Fbxo40	chr16	protein_coding	F-box protein 40
chr16	36835571	36837561	+	36835571;36836770	36836675;36837561	ES	0.5	50	50	ENSMUST00000183112.8	ENSMUSG00000034206.16	Polq	chr16	protein_coding	polymerase (DNA directed), theta
chr16	36837717	36843096	+	36837717	36860845	A3SS	0.5	50	50	ENSMUST00000183112.8	ENSMUSG00000034206.16	Polq	chr16	protein_coding	polymerase (DNA directed), theta
chr16	36833810	36835441	+	36833648	36835441	A5SS	0.5	50	50	ENSMUST00000183112.8	ENSMUSG00000034206.16	Polq	chr16	protein_coding	polymerase (DNA directed), theta
chr16	36855371	36860845	+	36837717	36860845	A5SS	0.5	50	50	ENSMUST00000183112.8	ENSMUSG00000034206.16	Polq	chr16	protein_coding	polymerase (DNA directed), theta
chr16	36960445	36994659	-	36960445;36962808	36962638;36994659	ES	0.33	50	50	ENSMUST00000114787.8	ENSMUSG00000022829.15	Stxbp5l	chr16	protein_coding	syntaxin binding protein 5-like
chr16	36994724	37008931	-	36994724;37007084	37007013;37008931	ES	0.5	50	50	ENSMUST00000114787.8	ENSMUSG00000022829.15	Stxbp5l	chr16	protein_coding	syntaxin binding protein 5-like
chr16	36977206	36994659	-	36962808	36994659	A3SS	0.33	50	50	ENSMUST00000114787.8	ENSMUSG00000022829.15	Stxbp5l	chr16	protein_coding	syntaxin binding protein 5-like
chr16	37195751	37203874	-	37165530	37203874	A3SS	0.5	50	50	ENSMUST00000114787.8	ENSMUSG00000022829.15	Stxbp5l	chr16	protein_coding	syntaxin binding protein 5-like
chr16	36977206	36994659	-	36960445	36994659	A3SS	0.33	50	50	ENSMUST00000114781.8	ENSMUSG00000022829.15	Stxbp5l	chr16	protein_coding	syntaxin binding protein 5-like
chr16	37380471	37384031	+	37380471	37383978	A3SS	0.5	50	50	ENSMUST00000023524.13	ENSMUSG00000022827.15	Rabl3	chr16	protein_coding	RAB, member RAS oncogene family-like 3
chr16	37409124	37413716	+	37409124;37410141	37410053;37413716	ES	0.5	50	50	ENSMUST00000160847.2	ENSMUSG00000022821.14	Hgd	chr16	protein_coding	homogentisate 1, 2-dioxygenase
chr16	37444745	37452038	+	37444745;37448965	37448784;37452038	ES	0.5	50	50	ENSMUST00000160847.2	ENSMUSG00000022821.14	Hgd	chr16	protein_coding	homogentisate 1, 2-dioxygenase
chr16	37400698;37408351	37408325;37409053	+	37400698	37409053	cassetteExon	0.5	100	100	ENSMUST00000160847.2	ENSMUSG00000022821.14	Hgd	chr16	protein_coding	homogentisate 1, 2-dioxygenase
chr16	37597712	37614250	+	37597712	37636068	A3SS	0.33	50	50	ENSMUST00000114763.3	ENSMUSG00000022816.12	Fstl1	chr16	protein_coding	follistatin-like 1
chr16	37597712	37619212	+	37597712	37636068	A3SS	0.33	50	50	ENSMUST00000114763.3	ENSMUSG00000022816.12	Fstl1	chr16	protein_coding	follistatin-like 1
chr16	37647206	37655252	+	37647206	37649069	A3SS&ES	0.5	50	50	ENSMUST00000114763.3	ENSMUSG00000022816.12	Fstl1	chr16	protein_coding	follistatin-like 1
chr16	37597712	37614250	+	37597712	37619212	A3SS	0.33	50	50	ENSMUST00000152579.8	ENSMUSG00000022816.12	Fstl1	chr16	protein_coding	follistatin-like 1
chr16	38028452;38037513	38037475;38040334	+	38028452	38040334	cassetteExon	0.5	100	100	ENSMUST00000023507.13	ENSMUSG00000022812.15	Gsk3b	chr16	protein_coding	glycogen synthase kinase 3 beta
chr16	37963781	37964622	+	37910975	37964622	A5SS	0.5	50	50	ENSMUST00000023507.13	ENSMUSG00000022812.15	Gsk3b	chr16	protein_coding	glycogen synthase kinase 3 beta
chr16	38028452	38037475	+	38028452	38060864	A3SS	0.33	50	50	ENSMUST00000231437.2	ENSMUSG00000022812.15	Gsk3b	chr16	protein_coding	glycogen synthase kinase 3 beta
chr16	38028452	38040334	+	38028452	38060864	A3SS	0.33	50	50	ENSMUST00000231437.2	ENSMUSG00000022812.15	Gsk3b	chr16	protein_coding	glycogen synthase kinase 3 beta
chr16	38049138	38060864	+	38028452	38060864	A5SS	0.5	50	50	ENSMUST00000231437.2	ENSMUSG00000022812.15	Gsk3b	chr16	protein_coding	glycogen synthase kinase 3 beta
chr16	38144021	38144499	-	38141915	38144499	A3SS	0.5	50	50	ENSMUST00000023501.16	ENSMUSG00000022805.18	Cfap91	chr16	protein_coding	cilia and flagella associated protein 91
chr16	38169691	38182461	+	38169691	38172988	3pMXE	0.25	50	50	ENSMUST00000050273.9	ENSMUSG00000046516.11	Cox17	chr16	protein_coding	cytochrome c oxidase assembly protein 17, copper chaperone
chr16	38169691;38170093	38170039;38172988	+	38169691	38172988	cassetteExon	0.5	100	100	ENSMUST00000050273.9	ENSMUSG00000046516.11	Cox17	chr16	protein_coding	cytochrome c oxidase assembly protein 17, copper chaperone
chr16	38169691	38172705	+	38169691	38172988	A3SS	0.25	50	50	ENSMUST00000050273.9	ENSMUSG00000046516.11	Cox17	chr16	protein_coding	cytochrome c oxidase assembly protein 17, copper chaperone
chr16	38167657	38172988	+	38169691	38172988	A5SS&ES	0.33	50	50	ENSMUST00000050273.9	ENSMUSG00000046516.11	Cox17	chr16	protein_coding	cytochrome c oxidase assembly protein 17, copper chaperone
chr16	38170093	38172988	+	38167657	38172988	A5SS	0.33	50	50	ENSMUST00000152868.2	ENSMUSG00000046516.11	Cox17	chr16	protein_coding	cytochrome c oxidase assembly protein 17, copper chaperone
chr16	38169691	38182461	+	38169691	38172705	3pMXE	0.25	50	50	ENSMUST00000134709.2	ENSMUSG00000046516.11	Cox17	chr16	protein_coding	cytochrome c oxidase assembly protein 17, copper chaperone
chr16	38169691	38170039	+	38169691	38172705	A3SS	0.25	50	50	ENSMUST00000134709.2	ENSMUSG00000046516.11	Cox17	chr16	protein_coding	cytochrome c oxidase assembly protein 17, copper chaperone
chr16	38169691	38170039	+	38169691	38182461	A3SS	0.25	50	50	ENSMUST00000119704.2	ENSMUSG00000095464.2	Gm21987	chr16	protein_coding	predicted gene 21987
chr16	38189267	38189846	+	38183509	38189846	A5SS	0.5	50	50	ENSMUST00000023494.13	ENSMUSG00000022803.13	Popdc2	chr16	protein_coding	popeye domain containing 2
chr16	38192396	38194181	+	38189954	38194181	A5SS	0.5	50	50	ENSMUST00000023494.13	ENSMUSG00000022803.13	Popdc2	chr16	protein_coding	popeye domain containing 2
chr16	38194598	38198017	+	38194739	38198017	A5SS	0.5	50	50	ENSMUST00000023494.13	ENSMUSG00000022803.13	Popdc2	chr16	protein_coding	popeye domain containing 2
chr16	38237623	38238123	-	38237623	38253166	A5SS	0.5	50	50	ENSMUST00000002926.8	ENSMUSG00000002847.8	Pla1a	chr16	protein_coding	phospholipase A1 member A
chr16	38267970	38272891	-	38267970;38270845	38270491;38272891	ES	0.5	50	50	ENSMUST00000002923.10	ENSMUSG00000002844.10	Adprh	chr16	protein_coding	ADP-ribosylarginine hydrolase
chr16	38272822	38273443	+	38272850	38273443	A5SS	0.5	50	50	ENSMUST00000180735.3	ENSMUSG00000097576.3	D930030I03Rik	chr16	lncRNA	RIKEN cDNA D930030I03 gene
chr16	38294545	38302982	+	38294545;38299707	38299426;38302982	ES	0.5	50	50	ENSMUST00000231716.2	ENSMUSG00000075122.6	Cd80	chr16	protein_coding	CD80 antigen
chr16	38337232	38338729	-	38331169	38338729	A3SS	0.5	50	50	ENSMUST00000002925.6	ENSMUSG00000002846.10	Timmdc1	chr16	protein_coding	translocase of inner mitochondrial membrane domain containing 1
chr16	38369998	38370445	-	38369795	38370445	A3SS	0.5	50	50	ENSMUST00000036210.7	ENSMUSG00000034064.15	Poglut1	chr16	protein_coding	protein O-glucosyltransferase 1
chr16	38384663	38396105	+	38384663;38393638	38393416;38396105	ES	0.5	50	50	ENSMUST00000163884.8	ENSMUSG00000002845.15	Tmem39a	chr16	protein_coding	transmembrane protein 39a
chr16	38406770	38411274	+	38406770;38408665	38408545;38411274	ES	0.5	50	50	ENSMUST00000163884.8	ENSMUSG00000002845.15	Tmem39a	chr16	protein_coding	transmembrane protein 39a
chr16	38405880;38406042	38405981;38406583	+	38405880	38406583	cassetteExon	0.5	100	100	ENSMUST00000163884.8	ENSMUSG00000002845.15	Tmem39a	chr16	protein_coding	transmembrane protein 39a
chr16	38384663	38393472	+	38384663	38393416	A3SS	0.25	50	50	ENSMUST00000163884.8	ENSMUSG00000002845.15	Tmem39a	chr16	protein_coding	transmembrane protein 39a
chr16	38402486	38405742	+	38402486	38405538	A3SS	0.5	50	50	ENSMUST00000163884.8	ENSMUSG00000002845.15	Tmem39a	chr16	protein_coding	transmembrane protein 39a
chr16	38383492	38384477	+	38379124	38384477	A5SS	0.5	50	50	ENSMUST00000163884.8	ENSMUSG00000002845.15	Tmem39a	chr16	protein_coding	transmembrane protein 39a
chr16	38407741	38408545	+	38406770	38408545	A5SS	0.5	50	50	ENSMUST00000163884.8	ENSMUSG00000002845.15	Tmem39a	chr16	protein_coding	transmembrane protein 39a
chr16	38384663	38405538	+	38384663	38393416	A3SS&ES	0.25	50	50	ENSMUST00000171687.8	ENSMUSG00000002845.15	Tmem39a	chr16	protein_coding	transmembrane protein 39a
chr16	38384663	38393472	+	38384663	38405538	A3SS	0.25	50	50	ENSMUST00000163948.8	ENSMUSG00000002845.15	Tmem39a	chr16	protein_coding	transmembrane protein 39a
chr16	38384663	38396105	+	38384663	38405538	A3SS	0.25	50	50	ENSMUST00000163948.8	ENSMUSG00000002845.15	Tmem39a	chr16	protein_coding	transmembrane protein 39a
chr16	38402486	38405538	+	38384663	38405538	A5SS	0.5	50	50	ENSMUST00000163948.8	ENSMUSG00000002845.15	Tmem39a	chr16	protein_coding	transmembrane protein 39a
chr16	38384663	38396105	+	38384663	38393472	3pMXE	0.25	50	50	ENSMUST00000166235.2	ENSMUSG00000002845.15	Tmem39a	chr16	protein_coding	transmembrane protein 39a
chr16	38384663;38393638	38393472;38396105	+	38384663	38396105	cassetteExon	0.5	100	100	ENSMUST00000163133.2	ENSMUSG00000002845.15	Tmem39a	chr16	protein_coding	transmembrane protein 39a
chr16	38406770	38411274	+	38406770	38408545	A3SS&ES	0.5	50	50	ENSMUST00000165631.2	ENSMUSG00000002845.15	Tmem39a	chr16	protein_coding	transmembrane protein 39a
chr16	38406770	38411274	+	38408665	38411274	5pMXE	0.5	50	50	ENSMUST00000165140.2	ENSMUSG00000002845.15	Tmem39a	chr16	protein_coding	transmembrane protein 39a
chr16	38562730;38571564	38571498;38572364	+	38562730	38572364	cassetteExon	0.5	100	100	ENSMUST00000023482.13	ENSMUSG00000022793.18	B4galt4	chr16	protein_coding	UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4
chr16	38562797	38572364	+	38562730	38572364	A5SS	0.33	50	50	ENSMUST00000023482.13	ENSMUSG00000022793.18	B4galt4	chr16	protein_coding	UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4
chr16	38578874	38583431	+	38578228	38583431	A5SS	0.33	50	50	ENSMUST00000023482.13	ENSMUSG00000022793.18	B4galt4	chr16	protein_coding	UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4
chr16	38581320	38583431	+	38578228	38583431	A5SS	0.33	50	50	ENSMUST00000023482.13	ENSMUSG00000022793.18	B4galt4	chr16	protein_coding	UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4
chr16	38581320	38586277	+	38583553	38586277	A5SS&ES	0.33	50	50	ENSMUST00000023482.13	ENSMUSG00000022793.18	B4galt4	chr16	protein_coding	UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4
chr16	38583491	38586277	+	38583553	38586277	A5SS	0.33	50	50	ENSMUST00000023482.13	ENSMUSG00000022793.18	B4galt4	chr16	protein_coding	UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4
chr16	38571564	38572364	+	38562797	38572364	A5SS	0.33	50	50	ENSMUST00000114712.8	ENSMUSG00000022793.18	B4galt4	chr16	protein_coding	UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4
chr16	38581320	38586277	+	38583491	38586277	A5SS&ES	0.33	50	50	ENSMUST00000154902.2	ENSMUSG00000022793.18	B4galt4	chr16	protein_coding	UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4
chr16	38581320	38583431	+	38578874	38583431	A5SS	0.33	50	50	ENSMUST00000232454.2	ENSMUSG00000022793.18	B4galt4	chr16	protein_coding	UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4
chr16	38581320	38586277	+	38581320;38583553	38583431;38586277	ES	0.33	50	50	ENSMUST00000114710.8	ENSMUSG00000022793.18	B4galt4	chr16	protein_coding	UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4
chr16	38581320;38583491	38583431;38586277	+	38581320	38586277	cassetteExon	0.5	100	100	ENSMUST00000114711.8	ENSMUSG00000022793.18	B4galt4	chr16	protein_coding	UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4
chr16	38644914	38647341	-	38644917	38647341	A3SS	0.5	50	50	ENSMUST00000122078.3	ENSMUSG00000022798.9	Tex55	chr16	protein_coding	testis expressed 55
chr16	38721837	38743962	+	38713036	38743962	A5SS	0.33	50	50	ENSMUST00000210186.2	ENSMUSG00000022790.15	Igsf11	chr16	protein_coding	immunoglobulin superfamily, member 11
chr16	38722921	38743962	+	38713036	38743962	A5SS	0.33	50	50	ENSMUST00000210186.2	ENSMUSG00000022790.15	Igsf11	chr16	protein_coding	immunoglobulin superfamily, member 11
chr16	38722921	38827496	+	38722009	38827496	A5SS	0.5	50	50	ENSMUST00000114706.8	ENSMUSG00000022790.15	Igsf11	chr16	protein_coding	immunoglobulin superfamily, member 11
chr16	38722921	38743962	+	38721837	38743962	A5SS	0.33	50	50	ENSMUST00000209958.2	ENSMUSG00000022790.15	Igsf11	chr16	protein_coding	immunoglobulin superfamily, member 11
chr16	38722921	38743962	+	38722921	38827496	A3SS	0.5	50	50	ENSMUST00000023478.8	ENSMUSG00000022790.15	Igsf11	chr16	protein_coding	immunoglobulin superfamily, member 11
chr16	40606422	41226304	+	40606422	40799862	3pMXE	0.33	50	50	ENSMUST00000189229.7	ENSMUSG00000061080.12	Lsamp	chr16	protein_coding	limbic system-associated membrane protein
chr16	40606422	41353815	+	40606422	40799862	3pMXE	0.33	50	50	ENSMUST00000189229.7	ENSMUSG00000061080.12	Lsamp	chr16	protein_coding	limbic system-associated membrane protein
chr16	39805089	40082630	+	39805089	40606363	A3SS	0.5	50	50	ENSMUST00000189229.7	ENSMUSG00000061080.12	Lsamp	chr16	protein_coding	limbic system-associated membrane protein
chr16	39805089	41027334	+	39805089	40606363	A3SS&ES	0.33	50	50	ENSMUST00000187695.7	ENSMUSG00000061080.12	Lsamp	chr16	protein_coding	limbic system-associated membrane protein
chr16	40606422	41226304	+	40606422	41353815	A3SS	0.33	50	50	ENSMUST00000187695.7	ENSMUSG00000061080.12	Lsamp	chr16	protein_coding	limbic system-associated membrane protein
chr16	41353893	41359229	+	41353893	41709278	A3SS	0.5	50	50	ENSMUST00000187695.7	ENSMUSG00000061080.12	Lsamp	chr16	protein_coding	limbic system-associated membrane protein
chr16	41965063	41971607	+	41965063	41994508	A3SS	0.5	50	50	ENSMUST00000187695.7	ENSMUSG00000061080.12	Lsamp	chr16	protein_coding	limbic system-associated membrane protein
chr16	41988546	41994508	+	41965063	41994508	A5SS	0.33	50	50	ENSMUST00000187695.7	ENSMUSG00000061080.12	Lsamp	chr16	protein_coding	limbic system-associated membrane protein
chr16	41989861	41994508	+	41965063	41994508	A5SS	0.33	50	50	ENSMUST00000187695.7	ENSMUSG00000061080.12	Lsamp	chr16	protein_coding	limbic system-associated membrane protein
chr16	39805089	40082630	+	39805089	41027334	A3SS	0.33	50	50	ENSMUST00000189358.7	ENSMUSG00000061080.12	Lsamp	chr16	protein_coding	limbic system-associated membrane protein
chr16	41988546;41989861	41989824;41994508	+	41988546	41994508	cassetteExon	0.5	100	100	ENSMUST00000145951.8	ENSMUSG00000061080.12	Lsamp	chr16	protein_coding	limbic system-associated membrane protein
chr16	42069477	42096333	-	42069477	42112162	A5SS	0.5	50	50	ENSMUST00000102817.5	ENSMUSG00000047261.10	Gap43	chr16	protein_coding	growth associated protein 43
chr16	42617314	42695795	-	42557952	42695795	A3SS	0.5	50	50	ENSMUST00000142270.2	ENSMUSG00000075070.7	4932412D23Rik	chr16	lncRNA	RIKEN cDNA 4932412D23 gene
chr16	42685968	42695975	-	42617314	42695975	A3SS	0.5	50	50	ENSMUST00000099759.3	ENSMUSG00000075070.7	4932412D23Rik	chr16	lncRNA	RIKEN cDNA 4932412D23 gene
chr16	42617314	42680355	-	42617314	42695975	A5SS	0.33	50	50	ENSMUST00000099759.3	ENSMUSG00000075070.7	4932412D23Rik	chr16	lncRNA	RIKEN cDNA 4932412D23 gene
chr16	42617314	42695795	-	42617314	42695975	A5SS	0.33	50	50	ENSMUST00000099759.3	ENSMUSG00000075070.7	4932412D23Rik	chr16	lncRNA	RIKEN cDNA 4932412D23 gene
chr16	42617314	42695795	-	42617314	42680355	A5SS&ES	0.33	50	50	ENSMUST00000147181.2	ENSMUSG00000075070.7	4932412D23Rik	chr16	lncRNA	RIKEN cDNA 4932412D23 gene
chr16	43053183	43122932	+	43053183;43103368	43103334;43122932	ES	0.16	50	50	ENSMUST00000126354.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	42845350;42892832	42892787;42967260	+	42845350	42967260	cassetteExon	0.5	100	100	ENSMUST00000126354.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	42967306;43013901	43013828;43053122	+	42967306	43053122	cassetteExon	0.5	100	100	ENSMUST00000126354.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	42967306;43013901	43013828;43122932	+	42967306;43103368	43053122;43122932	MXE	0.5	100	100	ENSMUST00000126354.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43122978;43279207	43279113;43283310	+	43122978	43283310	cassetteExon	0.5	100	100	ENSMUST00000126354.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	42728084	42845301	+	42734907	42845301	A5SS&ES	0.33	50	50	ENSMUST00000126354.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	42827449	42845301	+	42734907	42845301	A5SS	0.33	50	50	ENSMUST00000126354.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43056440	43122932	+	43103368	43122932	A5SS&ES	0.16	50	50	ENSMUST00000126354.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43067782	43122932	+	43103368	43122932	A5SS&ES	0.16	50	50	ENSMUST00000126354.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43183539	43283310	+	43122978	43283310	A5SS	0.2	50	50	ENSMUST00000126354.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43184335	43283310	+	43122978	43283310	A5SS	0.2	50	50	ENSMUST00000126354.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43184626	43283310	+	43122978	43283310	A5SS	0.2	50	50	ENSMUST00000126354.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	42845350	42967260	+	42845350	42892787	3pMXE	0.33	50	50	ENSMUST00000131689.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	42845350	43122932	+	42845350	42892787	3pMXE	0.33	50	50	ENSMUST00000131689.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	42728084;42827449	42827381;42845301	+	42728084	42845301	cassetteExon	0.5	100	100	ENSMUST00000131689.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43283349;43328685	43328522;43390044	+	43283349	43390044	cassetteExon	0.5	100	100	ENSMUST00000132881.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	42845350	42967260	+	42845350	43122932	A3SS	0.33	50	50	ENSMUST00000132881.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43013901	43122932	+	42845350	43122932	A5SS	0.16	50	50	ENSMUST00000132881.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43053183	43122932	+	42845350	43122932	A5SS	0.16	50	50	ENSMUST00000132881.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43056440	43122932	+	42845350	43122932	A5SS	0.16	50	50	ENSMUST00000132881.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43067782	43122932	+	42845350	43122932	A5SS	0.16	50	50	ENSMUST00000132881.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43103368	43122932	+	42845350	43122932	A5SS	0.16	50	50	ENSMUST00000132881.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43324116	43390044	+	43283349	43390044	A5SS	0.2	50	50	ENSMUST00000132881.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43330716	43390044	+	43283349	43390044	A5SS	0.2	50	50	ENSMUST00000132881.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43340783	43390044	+	43283349	43390044	A5SS	0.2	50	50	ENSMUST00000132881.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43390144	43397924	+	43390144;43392154	43392097;43397924	ES	0.33	50	50	ENSMUST00000151244.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	42967306;43053183	43053122;43122932	+	42967306;43013901	43013828;43122932	MXE	0.5	100	100	ENSMUST00000151244.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43013901;43053183	43053122;43122932	+	43013901	43122932	cassetteExon	0.5	100	100	ENSMUST00000151244.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43390144;43397556	43397393;43397924	+	43390144;43392154	43392097;43397924	MXE	0.5	100	100	ENSMUST00000151244.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43392154;43397556	43397393;43397924	+	43392154	43397924	cassetteExon	0.5	100	100	ENSMUST00000151244.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43056440	43122932	+	43013901	43122932	A5SS	0.16	50	50	ENSMUST00000151244.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43067782	43122932	+	43013901	43122932	A5SS	0.16	50	50	ENSMUST00000151244.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43103368	43122932	+	43013901	43122932	A5SS	0.16	50	50	ENSMUST00000151244.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43183539	43283310	+	43279207	43283310	A5SS&ES	0.2	50	50	ENSMUST00000151244.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43184335	43283310	+	43279207	43283310	A5SS&ES	0.2	50	50	ENSMUST00000151244.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43184626	43283310	+	43279207	43283310	A5SS&ES	0.2	50	50	ENSMUST00000151244.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43056440	43122932	+	43053183	43122932	A5SS	0.16	50	50	ENSMUST00000151290.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43067782	43122932	+	43053183	43122932	A5SS	0.16	50	50	ENSMUST00000151290.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43390144	43397393	+	43390144;43392154	43392097;43397393	ES	0.5	50	50	ENSMUST00000114694.9	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43390144;43397556	43397393;43397924	+	43390144	43397924	cassetteExon	0.5	100	100	ENSMUST00000146708.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43067782	43122932	+	43056440	43122932	A5SS	0.16	50	50	ENSMUST00000146708.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43328685;43340783	43340573;43390044	+	43328685	43390044	cassetteExon	0.5	100	100	ENSMUST00000141941.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43184335	43283310	+	43183539	43283310	A5SS	0.2	50	50	ENSMUST00000141941.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43184626	43283310	+	43183539	43283310	A5SS	0.2	50	50	ENSMUST00000141941.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43324116	43328522	+	43283349	43328522	A5SS	0.5	50	50	ENSMUST00000141941.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43324116	43390044	+	43328685	43390044	A5SS&ES	0.2	50	50	ENSMUST00000141941.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43330716	43390044	+	43328685	43390044	A5SS	0.2	50	50	ENSMUST00000141941.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43184626	43283310	+	43184335	43283310	A5SS	0.2	50	50	ENSMUST00000139491.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43392154	43397924	+	43392154	43397393	3pMXE	0.5	50	50	ENSMUST00000126100.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43324116;43328685	43328522;43390044	+	43324116	43390044	cassetteExon	0.5	100	100	ENSMUST00000126100.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43330716	43390044	+	43324116	43390044	A5SS	0.2	50	50	ENSMUST00000126100.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43340783	43390044	+	43324116	43390044	A5SS	0.2	50	50	ENSMUST00000126100.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43390144	43397393	+	43390144	43392097	3pMXE	0.33	50	50	ENSMUST00000123047.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43390144	43397924	+	43390144	43392097	3pMXE	0.33	50	50	ENSMUST00000123047.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43330716	43390044	+	43340783	43390044	A5SS&ES	0.25	50	50	ENSMUST00000122875.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43283349	43390044	+	43328685	43390044	5pMXE	0.2	50	50	ENSMUST00000162745.8	ENSMUSG00000022708.17	Zbtb20	chr16	protein_coding	zinc finger and BTB domain containing 20
chr16	43692183	43698320	-	43692183;43697204	43696992;43698320	ES	0.5	50	50	ENSMUST00000156568.8	ENSMUSG00000022704.17	Qtrt2	chr16	protein_coding	queuine tRNA-ribosyltransferase accessory subunit 2
chr16	43698396	43701356	-	43698396;43700717	43700662;43701356	ES	0.5	50	50	ENSMUST00000156568.8	ENSMUSG00000022704.17	Qtrt2	chr16	protein_coding	queuine tRNA-ribosyltransferase accessory subunit 2
chr16	43701576	43747050	-	43701576	43709930	5pMXE	0.5	50	50	ENSMUST00000156568.8	ENSMUSG00000022704.17	Qtrt2	chr16	protein_coding	queuine tRNA-ribosyltransferase accessory subunit 2
chr16	43689460	43691984	-	43689460	43691142	A5SS	0.5	50	50	ENSMUST00000156568.8	ENSMUSG00000022704.17	Qtrt2	chr16	protein_coding	queuine tRNA-ribosyltransferase accessory subunit 2
chr16	43700717	43701192	-	43700717	43701356	A5SS	0.33	50	50	ENSMUST00000156568.8	ENSMUSG00000022704.17	Qtrt2	chr16	protein_coding	queuine tRNA-ribosyltransferase accessory subunit 2
chr16	43700717	43701331	-	43700717	43701356	A5SS	0.33	50	50	ENSMUST00000156568.8	ENSMUSG00000022704.17	Qtrt2	chr16	protein_coding	queuine tRNA-ribosyltransferase accessory subunit 2
chr16	43698396	43701356	-	43698396	43700662	A5SS&ES	0.5	50	50	ENSMUST00000146343.8	ENSMUSG00000022704.17	Qtrt2	chr16	protein_coding	queuine tRNA-ribosyltransferase accessory subunit 2
chr16	43700717	43701192	-	43700717	43701331	A5SS	0.33	50	50	ENSMUST00000146343.8	ENSMUSG00000022704.17	Qtrt2	chr16	protein_coding	queuine tRNA-ribosyltransferase accessory subunit 2
chr16	43692183	43698320	-	43692183	43696992	5pMXE	0.5	50	50	ENSMUST00000151963.2	ENSMUSG00000022704.17	Qtrt2	chr16	protein_coding	queuine tRNA-ribosyltransferase accessory subunit 2
chr16	43692183	43698320	-	43697204	43698320	3pMXE	0.5	50	50	ENSMUST00000134792.2	ENSMUSG00000022704.17	Qtrt2	chr16	protein_coding	queuine tRNA-ribosyltransferase accessory subunit 2
chr16	43710401	43718453	+	43710401;43712554	43712516;43718453	ES	0.5	50	50	ENSMUST00000132859.8	ENSMUSG00000022701.19	Ccdc191	chr16	protein_coding	coiled-coil domain containing 191
chr16	43759526;43762192	43762151;43763867	+	43759526	43763867	cassetteExon	0.5	100	100	ENSMUST00000132859.8	ENSMUSG00000022701.19	Ccdc191	chr16	protein_coding	coiled-coil domain containing 191
chr16	43710401	43725709	+	43710401	43712516	A3SS&ES	0.33	50	50	ENSMUST00000132859.8	ENSMUSG00000022701.19	Ccdc191	chr16	protein_coding	coiled-coil domain containing 191
chr16	43718594	43725709	+	43718594	43725714	A3SS	0.5	50	50	ENSMUST00000132859.8	ENSMUSG00000022701.19	Ccdc191	chr16	protein_coding	coiled-coil domain containing 191
chr16	43710401	43725709	+	43710401;43718594	43718453;43725709	ES	0.5	50	50	ENSMUST00000178400.9	ENSMUSG00000022701.19	Ccdc191	chr16	protein_coding	coiled-coil domain containing 191
chr16	43791818	43793831	-	43791929	43793831	A3SS	0.33	50	50	ENSMUST00000231700.2	ENSMUSG00000036304.15	Zdhhc23	chr16	protein_coding	zinc finger, DHHC domain containing 23
chr16	43791920	43793831	-	43791929	43793831	A3SS	0.33	50	50	ENSMUST00000231700.2	ENSMUSG00000036304.15	Zdhhc23	chr16	protein_coding	zinc finger, DHHC domain containing 23
chr16	43791818	43793831	-	43791920	43793831	A3SS	0.33	50	50	ENSMUST00000036321.14	ENSMUSG00000036304.15	Zdhhc23	chr16	protein_coding	zinc finger, DHHC domain containing 23
chr16	43833400	43848190	-	43833400	43836451	5pMXE	0.33	50	50	ENSMUST00000036174.10	ENSMUSG00000036292.15	Gramd1c	chr16	protein_coding	GRAM domain containing 1C
chr16	43833400	43849042	-	43833400	43836451	5pMXE	0.33	50	50	ENSMUST00000036174.10	ENSMUSG00000036292.15	Gramd1c	chr16	protein_coding	GRAM domain containing 1C
chr16	43833400	43849042	-	43833400	43848190	5pMXE	0.33	50	50	ENSMUST00000114677.2	ENSMUSG00000036292.15	Gramd1c	chr16	protein_coding	GRAM domain containing 1C
chr16	43879611	43881688	-	43879611	43883635	A5SS	0.5	50	50	ENSMUST00000214098.2	ENSMUSG00000036292.15	Gramd1c	chr16	protein_coding	GRAM domain containing 1C
chr16	43937245	43959825	-	43937245	43959325	5pMXE	0.2	50	50	ENSMUST00000114666.9	ENSMUSG00000052459.14	Atp6v1a	chr16	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit A
chr16	43937245	43959874	-	43937245	43959325	5pMXE	0.2	50	50	ENSMUST00000114666.9	ENSMUSG00000052459.14	Atp6v1a	chr16	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit A
chr16	43937245	43959311	-	43937245	43959325	A5SS	0.2	50	50	ENSMUST00000114666.9	ENSMUSG00000052459.14	Atp6v1a	chr16	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit A
chr16	43937245	43959355	-	43937245	43959325	A5SS	0.2	50	50	ENSMUST00000114666.9	ENSMUSG00000052459.14	Atp6v1a	chr16	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit A
chr16	43937245	43959825	-	43937245	43959311	5pMXE	0.2	50	50	ENSMUST00000063661.13	ENSMUSG00000052459.14	Atp6v1a	chr16	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit A
chr16	43937245	43959874	-	43937245	43959311	5pMXE	0.2	50	50	ENSMUST00000063661.13	ENSMUSG00000052459.14	Atp6v1a	chr16	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit A
chr16	43937245	43959355	-	43937245	43959311	A5SS	0.2	50	50	ENSMUST00000063661.13	ENSMUSG00000052459.14	Atp6v1a	chr16	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit A
chr16	43937245	43959355	-	43937245	43959825	A5SS	0.2	50	50	ENSMUST00000137557.8	ENSMUSG00000052459.14	Atp6v1a	chr16	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit A
chr16	43937245	43959874	-	43937245	43959825	A5SS	0.2	50	50	ENSMUST00000137557.8	ENSMUSG00000052459.14	Atp6v1a	chr16	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit A
chr16	43937245	43959874	-	43937245	43959355	5pMXE	0.2	50	50	ENSMUST00000124102.8	ENSMUSG00000052459.14	Atp6v1a	chr16	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit A
chr16	43960474	43976773	+	43960474;43965281	43965144;43976773	ES	0.5	50	50	ENSMUST00000159514.8	ENSMUSG00000022698.18	Naa50	chr16	protein_coding	N(alpha)-acetyltransferase 50, NatE catalytic subunit
chr16	43976909	43978243	+	43976909;43977556	43977437;43978243	ES	0.5	50	50	ENSMUST00000159514.8	ENSMUSG00000022698.18	Naa50	chr16	protein_coding	N(alpha)-acetyltransferase 50, NatE catalytic subunit
chr16	43960474	43976776	+	43960474	43965144	A3SS&ES	0.33	50	50	ENSMUST00000159514.8	ENSMUSG00000022698.18	Naa50	chr16	protein_coding	N(alpha)-acetyltransferase 50, NatE catalytic subunit
chr16	43960474	43976776	+	43960474	43976773	A3SS	0.33	50	50	ENSMUST00000161326.8	ENSMUSG00000022698.18	Naa50	chr16	protein_coding	N(alpha)-acetyltransferase 50, NatE catalytic subunit
chr16	44019384;44019530	44019476;44020977	+	44019384	44020977	cassetteExon	0.5	100	100	ENSMUST00000119746.8	ENSMUSG00000068284.15	Usf3	chr16	protein_coding	upstream transcription factor family member 3
chr16	44019384;44019530	44019482;44020977	+	44019384	44020977	cassetteExon	0.5	100	100	ENSMUST00000119746.8	ENSMUSG00000068284.15	Usf3	chr16	protein_coding	upstream transcription factor family member 3
chr16	44019384	44019482	+	44019384	44019476	A3SS	0.33	50	50	ENSMUST00000088356.10	ENSMUSG00000068284.15	Usf3	chr16	protein_coding	upstream transcription factor family member 3
chr16	44019384	44020977	+	44019530	44020977	A5SS	0.5	50	50	ENSMUST00000141015.8	ENSMUSG00000068284.15	Usf3	chr16	protein_coding	upstream transcription factor family member 3
chr16	44088274	44090211	-	44088274	44089819	5pMXE	0.5	50	50	ENSMUST00000127567.8	ENSMUSG00000022696.18	Sidt1	chr16	protein_coding	SID1 transmembrane family, member 1
chr16	44075390;44076344	44076330;44078296	-	44075390	44078296	cassetteExon	0.5	100	100	ENSMUST00000127567.8	ENSMUSG00000022696.18	Sidt1	chr16	protein_coding	SID1 transmembrane family, member 1
chr16	44102026	44102158	-	44094147	44102158	A3SS	0.5	50	50	ENSMUST00000136381.8	ENSMUSG00000022696.18	Sidt1	chr16	protein_coding	SID1 transmembrane family, member 1
chr16	44121425	44152670	-	44111658	44152670	A3SS	0.5	50	50	ENSMUST00000124651.2	ENSMUSG00000022696.18	Sidt1	chr16	protein_coding	SID1 transmembrane family, member 1
chr16	44111658	44120165	-	44111658	44152670	A5SS	0.5	50	50	ENSMUST00000124651.2	ENSMUSG00000022696.18	Sidt1	chr16	protein_coding	SID1 transmembrane family, member 1
chr16	44176555	44178107	+	44176555	44178123	A3SS	0.5	50	50	ENSMUST00000050897.7	ENSMUSG00000043065.13	Spice1	chr16	protein_coding	spindle and centriole associated protein 1
chr16	44193028	44193826	+	44193028	44196005	A3SS	0.5	50	50	ENSMUST00000050897.7	ENSMUSG00000043065.13	Spice1	chr16	protein_coding	spindle and centriole associated protein 1
chr16	44168432	44175803	+	44167869	44175803	A5SS	0.5	50	50	ENSMUST00000050897.7	ENSMUSG00000043065.13	Spice1	chr16	protein_coding	spindle and centriole associated protein 1
chr16	44190919	44191043	+	44190741	44191043	A5SS	0.5	50	50	ENSMUST00000050897.7	ENSMUSG00000043065.13	Spice1	chr16	protein_coding	spindle and centriole associated protein 1
chr16	44167869	44175803	+	44167869	44178123	A3SS	0.5	50	50	ENSMUST00000155661.8	ENSMUSG00000043065.13	Spice1	chr16	protein_coding	spindle and centriole associated protein 1
chr16	44176555	44178123	+	44167869	44178123	A5SS	0.5	50	50	ENSMUST00000155661.8	ENSMUSG00000043065.13	Spice1	chr16	protein_coding	spindle and centriole associated protein 1
chr16	44254169	44257490	+	44254169;44255932	44255802;44257490	ES	0.5	50	50	ENSMUST00000099742.9	ENSMUSG00000071550.15	Cfap44	chr16	protein_coding	cilia and flagella associated protein 44
chr16	44234175;44235440	44234961;44236261	+	44234175	44236261	cassetteExon	0.5	100	100	ENSMUST00000099742.9	ENSMUSG00000071550.15	Cfap44	chr16	protein_coding	cilia and flagella associated protein 44
chr16	44238541	44239461	+	44238541	44239488	A3SS	0.5	50	50	ENSMUST00000099742.9	ENSMUSG00000071550.15	Cfap44	chr16	protein_coding	cilia and flagella associated protein 44
chr16	44291226	44294174	+	44291226	44299268	A3SS	0.5	50	50	ENSMUST00000127303.2	ENSMUSG00000071550.15	Cfap44	chr16	protein_coding	cilia and flagella associated protein 44
chr16	44295747	44299268	+	44291226	44299268	A5SS	0.5	50	50	ENSMUST00000127303.2	ENSMUSG00000071550.15	Cfap44	chr16	protein_coding	cilia and flagella associated protein 44
chr16	44544831	44549605	+	44544831;44547545	44547391;44549605	ES	0.5	50	50	ENSMUST00000048788.14	ENSMUSG00000036208.14	Nepro	chr16	protein_coding	nucleolus and neural progenitor protein
chr16	44550560	44552421	+	44550560;44552059	44551695;44552421	ES	0.5	50	50	ENSMUST00000048788.14	ENSMUSG00000036208.14	Nepro	chr16	protein_coding	nucleolus and neural progenitor protein
chr16	44549688	44549945	+	44549684	44549945	A5SS	0.5	50	50	ENSMUST00000048788.14	ENSMUSG00000036208.14	Nepro	chr16	protein_coding	nucleolus and neural progenitor protein
chr16	44550560	44552421	+	44550560	44551695	3pMXE	0.5	50	50	ENSMUST00000123673.8	ENSMUSG00000036208.14	Nepro	chr16	protein_coding	nucleolus and neural progenitor protein
chr16	44544831	44549605	+	44547545	44549605	5pMXE	0.5	50	50	ENSMUST00000130805.2	ENSMUSG00000036208.14	Nepro	chr16	protein_coding	nucleolus and neural progenitor protein
chr16	44564231	44566362	-	44564231;44565856	44565758;44566362	ES	0.5	50	50	ENSMUST00000162512.8	ENSMUSG00000022668.11	Gtpbp8	chr16	protein_coding	GTP-binding protein 8 (putative)
chr16	44564231	44565646	-	44564231	44565758	A5SS	0.33	50	50	ENSMUST00000162512.8	ENSMUSG00000022668.11	Gtpbp8	chr16	protein_coding	GTP-binding protein 8 (putative)
chr16	44565856	44566563	-	44565856	44566362	A5SS	0.5	50	50	ENSMUST00000162512.8	ENSMUSG00000022668.11	Gtpbp8	chr16	protein_coding	GTP-binding protein 8 (putative)
chr16	44564231	44566362	-	44564231	44565758	A5SS&ES	0.33	50	50	ENSMUST00000023348.11	ENSMUSG00000022668.11	Gtpbp8	chr16	protein_coding	GTP-binding protein 8 (putative)
chr16	44564231;44565856	44565646;44566362	-	44564231	44566362	cassetteExon	0.5	100	100	ENSMUST00000161436.2	ENSMUSG00000022668.11	Gtpbp8	chr16	protein_coding	GTP-binding protein 8 (putative)
chr16	44586435;44605866	44605573;44609109	+	44586435	44609109	cassetteExon	0.5	100	100	ENSMUST00000057488.15	ENSMUSG00000022667.19	Cd200r1	chr16	protein_coding	CD200 receptor 1
chr16	44610587;44612993	44612852;44613090	+	44610587	44613090	cassetteExon	0.5	100	100	ENSMUST00000057488.15	ENSMUSG00000022667.19	Cd200r1	chr16	protein_coding	CD200 receptor 1
chr16	44610587	44611832	+	44610587	44613090	A3SS	0.33	50	50	ENSMUST00000057488.15	ENSMUSG00000022667.19	Cd200r1	chr16	protein_coding	CD200 receptor 1
chr16	44610587	44613090	+	44610587;44612993	44611832;44613090	ES	0.5	50	50	ENSMUST00000231633.2	ENSMUSG00000022667.19	Cd200r1	chr16	protein_coding	CD200 receptor 1
chr16	44610587	44612852	+	44610587	44611832	A3SS	0.33	50	50	ENSMUST00000231633.2	ENSMUSG00000022667.19	Cd200r1	chr16	protein_coding	CD200 receptor 1
chr16	44641322;44650894	44650662;44652438	+	44641322	44652438	cassetteExon	0.5	100	100	ENSMUST00000176819.8	ENSMUSG00000062082.17	Cd200r4	chr16	protein_coding	CD200 receptor 4
chr16	44774082	44778091	+	44774082;44774700	44774482;44778091	ES	0.5	50	50	ENSMUST00000114613.9	ENSMUSG00000036172.18	Cd200r3	chr16	protein_coding	CD200 receptor 3
chr16	44778196	44785659	+	44778196	44785009	3pMXE	0.25	50	50	ENSMUST00000114613.9	ENSMUSG00000036172.18	Cd200r3	chr16	protein_coding	CD200 receptor 3
chr16	44778196	44785945	+	44778196	44785009	3pMXE	0.25	50	50	ENSMUST00000114613.9	ENSMUSG00000036172.18	Cd200r3	chr16	protein_coding	CD200 receptor 3
chr16	44778196	44801159	+	44778196	44785009	3pMXE	0.25	50	50	ENSMUST00000114613.9	ENSMUSG00000036172.18	Cd200r3	chr16	protein_coding	CD200 receptor 3
chr16	44778196	44785945	+	44778196	44785659	3pMXE	0.25	50	50	ENSMUST00000077178.13	ENSMUSG00000036172.18	Cd200r3	chr16	protein_coding	CD200 receptor 3
chr16	44778196	44801159	+	44778196	44785659	3pMXE	0.25	50	50	ENSMUST00000077178.13	ENSMUSG00000036172.18	Cd200r3	chr16	protein_coding	CD200 receptor 3
chr16	44778196	44801159	+	44778196	44785945	3pMXE	0.25	50	50	ENSMUST00000114611.10	ENSMUSG00000036172.18	Cd200r3	chr16	protein_coding	CD200 receptor 3
chr16	44778196;44785758	44785659;44785945	+	44778196	44785945	cassetteExon	0.5	100	100	ENSMUST00000114611.10	ENSMUSG00000036172.18	Cd200r3	chr16	protein_coding	CD200 receptor 3
chr16	44778196	44785945	+	44785758	44785945	5pMXE	0.5	50	50	ENSMUST00000163358.2	ENSMUSG00000036172.18	Cd200r3	chr16	protein_coding	CD200 receptor 3
chr16	44913921	44914392	+	44913960	44914392	A5SS	0.25	50	50	ENSMUST00000139509.2	ENSMUSG00000022665.16	Ccdc80	chr16	protein_coding	coiled-coil domain containing 80
chr16	44914031	44914392	+	44913960	44914392	A5SS	0.25	50	50	ENSMUST00000139509.2	ENSMUSG00000022665.16	Ccdc80	chr16	protein_coding	coiled-coil domain containing 80
chr16	44914232	44914392	+	44913960	44914392	A5SS	0.25	50	50	ENSMUST00000139509.2	ENSMUSG00000022665.16	Ccdc80	chr16	protein_coding	coiled-coil domain containing 80
chr16	44914031	44914392	+	44913921	44914392	A5SS	0.25	50	50	ENSMUST00000138048.8	ENSMUSG00000022665.16	Ccdc80	chr16	protein_coding	coiled-coil domain containing 80
chr16	44914232	44914392	+	44913921	44914392	A5SS	0.25	50	50	ENSMUST00000138048.8	ENSMUSG00000022665.16	Ccdc80	chr16	protein_coding	coiled-coil domain containing 80
chr16	44914232	44914392	+	44914031	44914392	A5SS	0.25	50	50	ENSMUST00000155800.2	ENSMUSG00000022665.16	Ccdc80	chr16	protein_coding	coiled-coil domain containing 80
chr16	44914232	44914495	+	44914232	44914392	A3SS	0.5	50	50	ENSMUST00000099498.10	ENSMUSG00000022665.16	Ccdc80	chr16	protein_coding	coiled-coil domain containing 80
chr16	44964764	44971816	-	44964764;44967698	44967631;44971816	ES	0.5	50	50	ENSMUST00000023344.10	ENSMUSG00000022664.12	Slc35a5	chr16	protein_coding	solute carrier family 35, member A5
chr16	44964210	44977824	-	44973038	44977824	A3SS&ES	0.5	50	50	ENSMUST00000023344.10	ENSMUSG00000022664.12	Slc35a5	chr16	protein_coding	solute carrier family 35, member A5
chr16	44977969	44978745	-	44978009	44978745	A3SS	0.33	50	50	ENSMUST00000023344.10	ENSMUSG00000022664.12	Slc35a5	chr16	protein_coding	solute carrier family 35, member A5
chr16	44978041	44978745	-	44978009	44978745	A3SS	0.33	50	50	ENSMUST00000023344.10	ENSMUSG00000022664.12	Slc35a5	chr16	protein_coding	solute carrier family 35, member A5
chr16	44978009	44978499	-	44978009	44978745	A5SS	0.5	50	50	ENSMUST00000023344.10	ENSMUSG00000022664.12	Slc35a5	chr16	protein_coding	solute carrier family 35, member A5
chr16	44977969	44978745	-	44978041	44978745	A3SS	0.33	50	50	ENSMUST00000180636.8	ENSMUSG00000022664.12	Slc35a5	chr16	protein_coding	solute carrier family 35, member A5
chr16	45063104	45064516	+	45063104	45064519	A3SS	0.5	50	50	ENSMUST00000102802.10	ENSMUSG00000052013.16	Btla	chr16	protein_coding	B and T lymphocyte associated
chr16	45217658	45229219	-	45217658;45220666	45220585;45229219	ES	0.2	50	50	ENSMUST00000163230.8	ENSMUSG00000022661.15	Cd200	chr16	protein_coding	CD200 antigen
chr16	45215223	45217332	-	45215228	45217332	A3SS	0.5	50	50	ENSMUST00000163230.8	ENSMUSG00000022661.15	Cd200	chr16	protein_coding	CD200 antigen
chr16	45220738	45229219	-	45220666	45229219	A3SS	0.2	50	50	ENSMUST00000163230.8	ENSMUSG00000022661.15	Cd200	chr16	protein_coding	CD200 antigen
chr16	45227674	45229219	-	45220666	45229219	A3SS	0.2	50	50	ENSMUST00000163230.8	ENSMUSG00000022661.15	Cd200	chr16	protein_coding	CD200 antigen
chr16	45203820	45212644	-	45203820	45212608	A5SS	0.5	50	50	ENSMUST00000163230.8	ENSMUSG00000022661.15	Cd200	chr16	protein_coding	CD200 antigen
chr16	45217658	45229086	-	45217658	45220585	A5SS&ES	0.33	50	50	ENSMUST00000163230.8	ENSMUSG00000022661.15	Cd200	chr16	protein_coding	CD200 antigen
chr16	45215228;45217658	45217332;45229219	-	45215228	45229219	cassetteExon	0.5	100	100	ENSMUST00000171328.8	ENSMUSG00000022661.15	Cd200	chr16	protein_coding	CD200 antigen
chr16	45220666	45229219	-	45215228	45229219	A3SS	0.2	50	50	ENSMUST00000171328.8	ENSMUSG00000022661.15	Cd200	chr16	protein_coding	CD200 antigen
chr16	45220738	45229219	-	45215228	45229219	A3SS	0.2	50	50	ENSMUST00000171328.8	ENSMUSG00000022661.15	Cd200	chr16	protein_coding	CD200 antigen
chr16	45227674	45229219	-	45215228	45229219	A3SS	0.2	50	50	ENSMUST00000171328.8	ENSMUSG00000022661.15	Cd200	chr16	protein_coding	CD200 antigen
chr16	45217658	45229219	-	45217658	45220585	5pMXE	0.33	50	50	ENSMUST00000167355.8	ENSMUSG00000022661.15	Cd200	chr16	protein_coding	CD200 antigen
chr16	45217658;45220738	45220585;45229219	-	45217658	45229219	cassetteExon	0.5	100	100	ENSMUST00000171855.8	ENSMUSG00000022661.15	Cd200	chr16	protein_coding	CD200 antigen
chr16	45227674	45229219	-	45217658	45229219	A3SS	0.2	50	50	ENSMUST00000171855.8	ENSMUSG00000022661.15	Cd200	chr16	protein_coding	CD200 antigen
chr16	45217658	45229086	-	45217658	45229219	A5SS	0.33	50	50	ENSMUST00000171855.8	ENSMUSG00000022661.15	Cd200	chr16	protein_coding	CD200 antigen
chr16	45215228	45229219	-	45217658	45229219	A3SS&ES	0.2	50	50	ENSMUST00000165910.8	ENSMUSG00000022661.15	Cd200	chr16	protein_coding	CD200 antigen
chr16	45217658	45229219	-	45220666	45229219	3pMXE	0.2	50	50	ENSMUST00000167552.2	ENSMUSG00000022661.15	Cd200	chr16	protein_coding	CD200 antigen
chr16	45217658	45229219	-	45220738	45229219	3pMXE	0.2	50	50	ENSMUST00000172297.2	ENSMUSG00000022661.15	Cd200	chr16	protein_coding	CD200 antigen
chr16	45227674	45229219	-	45220738	45229219	A3SS	0.2	50	50	ENSMUST00000172297.2	ENSMUSG00000022661.15	Cd200	chr16	protein_coding	CD200 antigen
chr16	45264528	45313217	-	45264528	45275209	5pMXE	0.5	50	50	ENSMUST00000144346.2	ENSMUSG00000053182.12	Gm609	chr16	protein_coding	predicted gene 609
chr16	45263109;45264528	45264190;45313217	-	45263109	45313217	cassetteExon	0.5	100	100	ENSMUST00000232138.2	ENSMUSG00000053182.12	Gm609	chr16	protein_coding	predicted gene 609
chr16	45380707	45395681	+	45380707;45393788	45393691;45395681	ES	0.5	50	50	ENSMUST00000159945.8	ENSMUSG00000033210.17	Slc9c1	chr16	protein_coding	solute carrier family 9, subfamily C (Na+-transporting carboxylic acid decarboxylase), member 1
chr16	45365218;45367847	45367732;45367963	+	45365218	45367963	cassetteExon	0.5	100	100	ENSMUST00000159945.8	ENSMUSG00000033210.17	Slc9c1	chr16	protein_coding	solute carrier family 9, subfamily C (Na+-transporting carboxylic acid decarboxylase), member 1
chr16	45413960	45419814	+	45413855	45419814	A5SS	0.5	50	50	ENSMUST00000159945.8	ENSMUSG00000033210.17	Slc9c1	chr16	protein_coding	solute carrier family 9, subfamily C (Na+-transporting carboxylic acid decarboxylase), member 1
chr16	45430923	45436314	+	45430923;45433452	45433387;45436314	ES	0.5	50	50	ENSMUST00000161347.9	ENSMUSG00000022659.14	Gcsam	chr16	protein_coding	germinal center associated, signaling and motility
chr16	45501111	45503772	-	45501111;45501974	45501936;45503772	ES	0.5	50	50	ENSMUST00000114562.3	ENSMUSG00000033177.14	Tmprss7	chr16	protein_coding	transmembrane serine protease 7
chr16	45503962	45504934	-	45503965	45504934	A3SS	0.5	50	50	ENSMUST00000114562.3	ENSMUSG00000033177.14	Tmprss7	chr16	protein_coding	transmembrane serine protease 7
chr16	45501974	45503761	-	45501974	45503772	A5SS	0.5	50	50	ENSMUST00000114562.3	ENSMUSG00000033177.14	Tmprss7	chr16	protein_coding	transmembrane serine protease 7
chr16	45505001	45505608	-	45505001	45506674	A5SS	0.33	50	50	ENSMUST00000114562.3	ENSMUSG00000033177.14	Tmprss7	chr16	protein_coding	transmembrane serine protease 7
chr16	45506804	45509931	-	45506804	45511121	A5SS	0.5	50	50	ENSMUST00000114562.3	ENSMUSG00000033177.14	Tmprss7	chr16	protein_coding	transmembrane serine protease 7
chr16	45505001	45506805	-	45505001	45505608	5pMXE	0.33	50	50	ENSMUST00000170951.8	ENSMUSG00000033177.14	Tmprss7	chr16	protein_coding	transmembrane serine protease 7
chr16	45501111	45503772	-	45501111	45501936	A5SS&ES	0.5	50	50	ENSMUST00000170951.8	ENSMUSG00000033177.14	Tmprss7	chr16	protein_coding	transmembrane serine protease 7
chr16	45505001	45506674	-	45505001	45506805	A5SS	0.33	50	50	ENSMUST00000178150.8	ENSMUSG00000033177.14	Tmprss7	chr16	protein_coding	transmembrane serine protease 7
chr16	45557998	45563140	-	45557998;45560865	45560682;45563140	ES	0.33	50	50	ENSMUST00000066983.13	ENSMUSG00000033157.18	Abhd10	chr16	protein_coding	abhydrolase domain containing 10
chr16	45552322;45553142	45553101;45557256	-	45552322	45557256	cassetteExon	0.5	100	100	ENSMUST00000066983.13	ENSMUSG00000033157.18	Abhd10	chr16	protein_coding	abhydrolase domain containing 10
chr16	45560865;45561542	45561347;45563140	-	45560865	45563140	cassetteExon	0.5	100	100	ENSMUST00000066983.13	ENSMUSG00000033157.18	Abhd10	chr16	protein_coding	abhydrolase domain containing 10
chr16	45561542	45563140	-	45557998	45563140	A3SS	0.33	50	50	ENSMUST00000128348.3	ENSMUSG00000033157.18	Abhd10	chr16	protein_coding	abhydrolase domain containing 10
chr16	45560865	45563140	-	45561542	45563140	3pMXE	0.33	50	50	ENSMUST00000155741.2	ENSMUSG00000033157.18	Abhd10	chr16	protein_coding	abhydrolase domain containing 10
chr16	45592638	45598076	-	45592638;45595450	45595307;45598076	ES	0.5	50	50	ENSMUST00000036355.13	ENSMUSG00000033149.18	Phldb2	chr16	protein_coding	pleckstrin homology like domain, family B, member 2
chr16	45646458	45680685	-	45646458	45664571	5pMXE	0.33	50	50	ENSMUST00000036355.13	ENSMUSG00000033149.18	Phldb2	chr16	protein_coding	pleckstrin homology like domain, family B, member 2
chr16	45646458;45647589	45647505;45664571	-	45646458	45664571	cassetteExon	0.5	100	100	ENSMUST00000036355.13	ENSMUSG00000033149.18	Phldb2	chr16	protein_coding	pleckstrin homology like domain, family B, member 2
chr16	45592638	45594526	-	45592638	45595307	A5SS	0.33	50	50	ENSMUST00000036355.13	ENSMUSG00000033149.18	Phldb2	chr16	protein_coding	pleckstrin homology like domain, family B, member 2
chr16	45609480	45611661	-	45609480	45621855	A5SS	0.5	50	50	ENSMUST00000036355.13	ENSMUSG00000033149.18	Phldb2	chr16	protein_coding	pleckstrin homology like domain, family B, member 2
chr16	45592638	45594526	-	45592638	45598076	A5SS	0.33	50	50	ENSMUST00000131003.8	ENSMUSG00000033149.18	Phldb2	chr16	protein_coding	pleckstrin homology like domain, family B, member 2
chr16	45680799;45694235	45694165;45773739	-	45680799	45773739	cassetteExon	0.5	100	100	ENSMUST00000134802.8	ENSMUSG00000033149.18	Phldb2	chr16	protein_coding	pleckstrin homology like domain, family B, member 2
chr16	45727820	45773739	-	45680799	45773739	A3SS	0.33	50	50	ENSMUST00000134802.8	ENSMUSG00000033149.18	Phldb2	chr16	protein_coding	pleckstrin homology like domain, family B, member 2
chr16	45646458	45647505	-	45646458	45680685	A5SS	0.33	50	50	ENSMUST00000134802.8	ENSMUSG00000033149.18	Phldb2	chr16	protein_coding	pleckstrin homology like domain, family B, member 2
chr16	45727820	45773739	-	45694235	45773739	A3SS	0.33	50	50	ENSMUST00000136405.2	ENSMUSG00000033149.18	Phldb2	chr16	protein_coding	pleckstrin homology like domain, family B, member 2
chr16	45766076	45768159	+	45766076	45787237	A3SS	0.33	50	50	ENSMUST00000154775.2	ENSMUSG00000085826.2	Gm15638	chr16	lncRNA	predicted gene 15638
chr16	45766076	45768663	+	45766076	45787237	A3SS	0.33	50	50	ENSMUST00000154775.2	ENSMUSG00000085826.2	Gm15638	chr16	lncRNA	predicted gene 15638
chr16	45766076	45768663	+	45766076	45768159	A3SS	0.5	50	50	ENSMUST00000128159.2	ENSMUSG00000085826.2	Gm15638	chr16	lncRNA	predicted gene 15638
chr16	46278594	46284181	-	46278594;46279474	46279178;46284181	ES	0.5	50	50	ENSMUST00000023335.13	ENSMUSG00000022656.16	Nectin3	chr16	protein_coding	nectin cell adhesion molecule 3
chr16	46284522	46318754	-	46284522	46316978	5pMXE	0.5	50	50	ENSMUST00000023335.13	ENSMUSG00000022656.16	Nectin3	chr16	protein_coding	nectin cell adhesion molecule 3
chr16	46269331	46274987	-	46258431	46274987	A3SS	0.5	50	50	ENSMUST00000023335.13	ENSMUSG00000022656.16	Nectin3	chr16	protein_coding	nectin cell adhesion molecule 3
chr16	46216505	46231470	-	46216505	46256717	A5SS	0.5	50	50	ENSMUST00000023335.13	ENSMUSG00000022656.16	Nectin3	chr16	protein_coding	nectin cell adhesion molecule 3
chr16	46258431	46268492	-	46258431	46274987	A5SS	0.5	50	50	ENSMUST00000023335.13	ENSMUSG00000022656.16	Nectin3	chr16	protein_coding	nectin cell adhesion molecule 3
chr16	46216484	46231470	-	46216505	46231470	A3SS	0.5	50	50	ENSMUST00000121803.8	ENSMUSG00000022656.16	Nectin3	chr16	protein_coding	nectin cell adhesion molecule 3
chr16	46278594	46284181	-	46279474	46284181	3pMXE	0.5	50	50	ENSMUST00000133935.2	ENSMUSG00000022656.16	Nectin3	chr16	protein_coding	nectin cell adhesion molecule 3
chr16	48109463	48111377	+	48109741	48111377	A5SS&ES	0.5	50	50	ENSMUST00000096045.9	ENSMUSG00000058550.16	Dppa4	chr16	protein_coding	developmental pluripotency associated 4
chr16	48300043	48300191	+	48281148	48300191	A5SS	0.5	50	50	ENSMUST00000023330.8	ENSMUSG00000022652.8	Morc1	chr16	protein_coding	microrchidia 1
chr16	48415097	48432652	+	48412978	48432652	A5SS	0.5	50	50	ENSMUST00000023330.8	ENSMUSG00000022652.8	Morc1	chr16	protein_coding	microrchidia 1
chr16	48562623	48581728	-	48562623;48574648	48574612;48581728	ES	0.5	50	50	ENSMUST00000231701.3	ENSMUSG00000030775.12	Trat1	chr16	protein_coding	T cell receptor associated transmembrane adaptor 1
chr16	48747708	48747905	-	48746465	48747905	A3SS	0.5	50	50	ENSMUST00000147358.8	ENSMUSG00000064061.14	Dzip3	chr16	protein_coding	DAZ interacting protein 3, zinc finger
chr16	48770396	48774090	-	48770396;48772523	48771906;48774090	ES	0.5	50	50	ENSMUST00000121869.8	ENSMUSG00000064061.14	Dzip3	chr16	protein_coding	DAZ interacting protein 3, zinc finger
chr16	48772523	48774090	-	48770396	48774090	A3SS	0.5	50	50	ENSMUST00000114516.8	ENSMUSG00000064061.14	Dzip3	chr16	protein_coding	DAZ interacting protein 3, zinc finger
chr16	48770396	48771906	-	48770396	48774090	A5SS	0.5	50	50	ENSMUST00000114516.8	ENSMUSG00000064061.14	Dzip3	chr16	protein_coding	DAZ interacting protein 3, zinc finger
chr16	48814742	48819318	+	48814742;48817881	48817734;48819318	ES	0.5	50	50	ENSMUST00000117994.8	ENSMUSG00000033031.14	Cip2a	chr16	protein_coding	cell proliferation regulating inhibitor of protein phosphatase 2A
chr16	49519912	49523513	+	49519912;49522379	49522217;49523513	ES	0.5	50	50	ENSMUST00000046777.11	ENSMUSG00000032965.12	Ift57	chr16	protein_coding	intraflagellar transport 57
chr16	49519973	49522217	+	49519912	49522217	A5SS	0.5	50	50	ENSMUST00000046777.11	ENSMUSG00000032965.12	Ift57	chr16	protein_coding	intraflagellar transport 57
chr16	49531484	49532202	+	49526544	49532202	A5SS	0.5	50	50	ENSMUST00000046777.11	ENSMUSG00000032965.12	Ift57	chr16	protein_coding	intraflagellar transport 57
chr16	49519912	49523513	+	49522379	49523513	A5SS&ES	0.5	50	50	ENSMUST00000142682.9	ENSMUSG00000032965.12	Ift57	chr16	protein_coding	intraflagellar transport 57
chr16	49688475	49704528	+	49688475;49689443	49689381;49704528	ES	0.5	50	50	ENSMUST00000229640.2	ENSMUSG00000055447.20	Cd47	chr16	protein_coding	CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
chr16	49704617	49715732	+	49704617;49714647	49714540;49715732	ES	0.5	50	50	ENSMUST00000229640.2	ENSMUSG00000055447.20	Cd47	chr16	protein_coding	CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
chr16	49718495;49720263	49720219;49727144	+	49718495	49727144	cassetteExon	0.5	100	100	ENSMUST00000229640.2	ENSMUSG00000055447.20	Cd47	chr16	protein_coding	CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
chr16	49727175;49728441	49728417;49731232	+	49727175	49731232	cassetteExon	0.5	100	100	ENSMUST00000229640.2	ENSMUSG00000055447.20	Cd47	chr16	protein_coding	CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
chr16	49675760	49688128	+	49628507	49688128	A5SS	0.25	50	50	ENSMUST00000229640.2	ENSMUSG00000055447.20	Cd47	chr16	protein_coding	CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
chr16	49676195	49688128	+	49628507	49688128	A5SS	0.25	50	50	ENSMUST00000229640.2	ENSMUSG00000055447.20	Cd47	chr16	protein_coding	CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
chr16	49687270	49688128	+	49628507	49688128	A5SS	0.25	50	50	ENSMUST00000229640.2	ENSMUSG00000055447.20	Cd47	chr16	protein_coding	CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
chr16	49729098	49731232	+	49727175	49731232	A5SS	0.33	50	50	ENSMUST00000229640.2	ENSMUSG00000055447.20	Cd47	chr16	protein_coding	CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
chr16	49676195	49688128	+	49675760	49688128	A5SS	0.25	50	50	ENSMUST00000114496.3	ENSMUSG00000055447.20	Cd47	chr16	protein_coding	CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
chr16	49687270	49688128	+	49675760	49688128	A5SS	0.25	50	50	ENSMUST00000114496.3	ENSMUSG00000055447.20	Cd47	chr16	protein_coding	CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
chr16	49728441;49729098	49729066;49731232	+	49728441	49731232	cassetteExon	0.5	100	100	ENSMUST00000229101.2	ENSMUSG00000055447.20	Cd47	chr16	protein_coding	CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
chr16	49687270	49688128	+	49676195	49688128	A5SS	0.25	50	50	ENSMUST00000229101.2	ENSMUSG00000055447.20	Cd47	chr16	protein_coding	CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
chr16	49727175	49731232	+	49727175	49728417	A3SS&ES	0.5	50	50	ENSMUST00000230281.2	ENSMUSG00000055447.20	Cd47	chr16	protein_coding	CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
chr16	50022938	50040808	-	50022938;50029507	50029448;50040808	ES	0.33	50	50	ENSMUST00000138166.8	ENSMUSG00000022641.16	Bbx	chr16	protein_coding	bobby sox HMG box containing
chr16	50068219	50082779	-	50068219;50071757	50071677;50082779	ES	0.5	50	50	ENSMUST00000138166.8	ENSMUSG00000022641.16	Bbx	chr16	protein_coding	bobby sox HMG box containing
chr16	50086732	50100732	-	50086732;50095152	50094910;50100732	ES	0.5	50	50	ENSMUST00000138166.8	ENSMUSG00000022641.16	Bbx	chr16	protein_coding	bobby sox HMG box containing
chr16	50029507;50030897	50030808;50040808	-	50029507	50040808	cassetteExon	0.5	100	100	ENSMUST00000138166.8	ENSMUSG00000022641.16	Bbx	chr16	protein_coding	bobby sox HMG box containing
chr16	50100902;50140776	50140663;50151392	-	50100902	50151392	cassetteExon	0.5	100	100	ENSMUST00000138166.8	ENSMUSG00000022641.16	Bbx	chr16	protein_coding	bobby sox HMG box containing
chr16	50248856	50249273	-	50151465	50249273	A3SS	0.5	50	50	ENSMUST00000138166.8	ENSMUSG00000022641.16	Bbx	chr16	protein_coding	bobby sox HMG box containing
chr16	50100902	50151197	-	50100902	50151392	A5SS	0.33	50	50	ENSMUST00000138166.8	ENSMUSG00000022641.16	Bbx	chr16	protein_coding	bobby sox HMG box containing
chr16	50249344	50250146	-	50249344	50252605	A5SS	0.33	50	50	ENSMUST00000138166.8	ENSMUSG00000022641.16	Bbx	chr16	protein_coding	bobby sox HMG box containing
chr16	50249344	50252474	-	50249344	50252605	A5SS	0.33	50	50	ENSMUST00000138166.8	ENSMUSG00000022641.16	Bbx	chr16	protein_coding	bobby sox HMG box containing
chr16	50030897	50040808	-	50022938	50040808	A3SS	0.33	50	50	ENSMUST00000089404.10	ENSMUSG00000022641.16	Bbx	chr16	protein_coding	bobby sox HMG box containing
chr16	50100902	50151197	-	50100902	50140663	A5SS&ES	0.33	50	50	ENSMUST00000089404.10	ENSMUSG00000022641.16	Bbx	chr16	protein_coding	bobby sox HMG box containing
chr16	50029507	50040808	-	50030897	50040808	3pMXE	0.33	50	50	ENSMUST00000089399.11	ENSMUSG00000022641.16	Bbx	chr16	protein_coding	bobby sox HMG box containing
chr16	50249344	50250146	-	50249344	50252474	A5SS	0.33	50	50	ENSMUST00000114477.8	ENSMUSG00000022641.16	Bbx	chr16	protein_coding	bobby sox HMG box containing
chr16	50358681;50362364	50362204;50374838	+	50358681	50374838	cassetteExon	0.5	100	100	ENSMUST00000231801.2	ENSMUSG00000097694.9	G730013B05Rik	chr16	lncRNA	RIKEN cDNA G730013B05 gene
chr16	50348926	50357851	+	50346745	50357851	A5SS	0.5	50	50	ENSMUST00000231801.2	ENSMUSG00000097694.9	G730013B05Rik	chr16	lncRNA	RIKEN cDNA G730013B05 gene
chr16	50540909;50548019	50547982;50548255	-	50540909;50547361	50547237;50548255	MXE	0.5	100	100	ENSMUST00000186944.7	ENSMUSG00000022639.15	Dubr	chr16	lncRNA	Dppa2 upstream binding RNA
chr16	50548572	50552296	-	50548572	50552781	A5SS	0.5	50	50	ENSMUST00000186944.7	ENSMUSG00000022639.15	Dubr	chr16	lncRNA	Dppa2 upstream binding RNA
chr16	50540909	50547237	-	50540909	50547982	A5SS	0.5	50	50	ENSMUST00000191079.2	ENSMUSG00000022639.15	Dubr	chr16	lncRNA	Dppa2 upstream binding RNA
chr16	50547361	50548255	-	50548019	50548255	3pMXE	0.5	50	50	ENSMUST00000169791.4	ENSMUSG00000022639.15	Dubr	chr16	lncRNA	Dppa2 upstream binding RNA
chr16	50603920	50604193	+	50603920	50604190	A3SS	0.5	50	50	ENSMUST00000173461.3	ENSMUSG00000092276.3	1700116B05Rik	chr16	lncRNA	RIKEN cDNA 1700116B05 gene
chr16	51852048;51852622	51852541;51853372	+	51852048	51853372	cassetteExon	0.5	100	100	ENSMUST00000114471.3	ENSMUSG00000022637.12	Cblb	chr16	protein_coding	Casitas B-lineage lymphoma b
chr16	51852048;51852661	51852541;51853372	+	51852048	51853372	cassetteExon	0.5	100	100	ENSMUST00000114471.3	ENSMUSG00000022637.12	Cblb	chr16	protein_coding	Casitas B-lineage lymphoma b
chr16	52006595;52006843	52006712;52009376	+	52006595	52009376	cassetteExon	0.5	100	100	ENSMUST00000114471.3	ENSMUSG00000022637.12	Cblb	chr16	protein_coding	Casitas B-lineage lymphoma b
chr16	51973077	51976907	+	51973077	51984659	A3SS	0.5	50	50	ENSMUST00000114471.3	ENSMUSG00000022637.12	Cblb	chr16	protein_coding	Casitas B-lineage lymphoma b
chr16	51870170	51932464	+	51867812	51932464	A5SS	0.5	50	50	ENSMUST00000114471.3	ENSMUSG00000022637.12	Cblb	chr16	protein_coding	Casitas B-lineage lymphoma b
chr16	51852661	51853372	+	51852622	51853372	A5SS	0.33	50	50	ENSMUST00000227062.2	ENSMUSG00000022637.12	Cblb	chr16	protein_coding	Casitas B-lineage lymphoma b
chr16	51852048	51853372	+	51852661	51853372	5pMXE	0.33	50	50	ENSMUST00000227879.2	ENSMUSG00000022637.12	Cblb	chr16	protein_coding	Casitas B-lineage lymphoma b
chr16	52088862	52091010	-	52088862;52089191	52089153;52091010	ES	0.5	50	50	ENSMUST00000023312.14	ENSMUSG00000022636.14	Alcam	chr16	protein_coding	activated leukocyte cell adhesion molecule
chr16	52111367	52115387	-	52097263	52115387	A3SS	0.5	50	50	ENSMUST00000167115.8	ENSMUSG00000022636.14	Alcam	chr16	protein_coding	activated leukocyte cell adhesion molecule
chr16	52097263	52109281	-	52097263	52115387	A5SS	0.5	50	50	ENSMUST00000167115.8	ENSMUSG00000022636.14	Alcam	chr16	protein_coding	activated leukocyte cell adhesion molecule
chr16	52088862	52091010	-	52088862	52089153	5pMXE	0.5	50	50	ENSMUST00000163788.8	ENSMUSG00000022636.14	Alcam	chr16	protein_coding	activated leukocyte cell adhesion molecule
chr16	52649750	52681554	+	52649750	52698514	A3SS	0.5	50	50	ENSMUST00000231992.2	ENSMUSG00000116689.2	4930405D01Rik	chr16	lncRNA	RIKEN cDNA 4930405D01 gene
chr16	52683976	52698514	+	52649750	52698514	A5SS	0.5	50	50	ENSMUST00000231992.2	ENSMUSG00000116689.2	4930405D01Rik	chr16	lncRNA	RIKEN cDNA 4930405D01 gene
chr16	55640069	55656684	-	55640069	55642131	5pMXE	0.5	50	50	ENSMUST00000114458.8	ENSMUSG00000035356.18	Nfkbiz	chr16	protein_coding	nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta
chr16	55640069	55656684	-	55640069;55642478	55642131;55656684	ES	0.33	50	50	ENSMUST00000036273.13	ENSMUSG00000035356.18	Nfkbiz	chr16	protein_coding	nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta
chr16	55645908	55656684	-	55642478	55656684	A3SS	0.33	50	50	ENSMUST00000036273.13	ENSMUSG00000035356.18	Nfkbiz	chr16	protein_coding	nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta
chr16	55645908	55656684	-	55640069	55656684	A3SS	0.33	50	50	ENSMUST00000114457.8	ENSMUSG00000035356.18	Nfkbiz	chr16	protein_coding	nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta
chr16	55745042	55745332	-	55743403	55745332	A3SS	0.33	50	50	ENSMUST00000023270.14	ENSMUSG00000022604.19	Cep97	chr16	protein_coding	centrosomal protein 97
chr16	55745213	55745332	-	55743403	55745332	A3SS	0.33	50	50	ENSMUST00000023270.14	ENSMUSG00000022604.19	Cep97	chr16	protein_coding	centrosomal protein 97
chr16	55750971	55754200	-	55750971	55755116	A5SS	0.33	50	50	ENSMUST00000023270.14	ENSMUSG00000022604.19	Cep97	chr16	protein_coding	centrosomal protein 97
chr16	55750971	55754428	-	55750971	55755116	A5SS	0.33	50	50	ENSMUST00000023270.14	ENSMUSG00000022604.19	Cep97	chr16	protein_coding	centrosomal protein 97
chr16	55750971	55754428	-	55750971	55754200	A5SS	0.33	50	50	ENSMUST00000118500.8	ENSMUSG00000022604.19	Cep97	chr16	protein_coding	centrosomal protein 97
chr16	55745042	55745332	-	55745213	55745332	A3SS	0.33	50	50	ENSMUST00000121129.8	ENSMUSG00000022604.19	Cep97	chr16	protein_coding	centrosomal protein 97
chr16	55790538	55800958	+	55790538	55791674	3pMXE	0.5	50	50	ENSMUST00000023269.5	ENSMUSG00000098274.8	Rpl24	chr16	protein_coding	ribosomal protein L24
chr16	55794734	55800958	+	55790538	55800958	A5SS	0.5	50	50	ENSMUST00000122365.2	ENSMUSG00000098371.2	Gm28037	chr16	lncRNA	predicted gene, 28037
chr16	55842492	55849966	-	55842492	55844587	5pMXE	0.5	50	50	ENSMUST00000119981.8	ENSMUSG00000071533.12	Pcnp	chr16	protein_coding	PEST proteolytic signal containing nuclear protein
chr16	55842492	55849966	-	55842492;55844749	55844587;55849966	ES	0.2	50	50	ENSMUST00000125040.8	ENSMUSG00000071533.12	Pcnp	chr16	protein_coding	PEST proteolytic signal containing nuclear protein
chr16	55844801	55849966	-	55844749	55849966	A3SS	0.2	50	50	ENSMUST00000125040.8	ENSMUSG00000071533.12	Pcnp	chr16	protein_coding	PEST proteolytic signal containing nuclear protein
chr16	55845000	55849966	-	55844749	55849966	A3SS	0.2	50	50	ENSMUST00000125040.8	ENSMUSG00000071533.12	Pcnp	chr16	protein_coding	PEST proteolytic signal containing nuclear protein
chr16	55842492	55849966	-	55842492;55844801	55844587;55849966	ES	0.2	50	50	ENSMUST00000114444.9	ENSMUSG00000071533.12	Pcnp	chr16	protein_coding	PEST proteolytic signal containing nuclear protein
chr16	55844801;55845000	55844897;55849966	-	55844801	55849966	cassetteExon	0.5	100	100	ENSMUST00000114444.9	ENSMUSG00000071533.12	Pcnp	chr16	protein_coding	PEST proteolytic signal containing nuclear protein
chr16	55838890	55849966	-	55838890;55842492	55842418;55849966	ES	0.2	50	50	ENSMUST00000137736.8	ENSMUSG00000071533.12	Pcnp	chr16	protein_coding	PEST proteolytic signal containing nuclear protein
chr16	55842492;55845000	55844587;55849966	-	55842492	55849966	cassetteExon	0.5	100	100	ENSMUST00000137736.8	ENSMUSG00000071533.12	Pcnp	chr16	protein_coding	PEST proteolytic signal containing nuclear protein
chr16	55844801	55849966	-	55845000	55849966	A3SS	0.2	50	50	ENSMUST00000130818.8	ENSMUSG00000071533.12	Pcnp	chr16	protein_coding	PEST proteolytic signal containing nuclear protein
chr16	55844749	55849966	-	55838890	55849966	A3SS	0.2	50	50	ENSMUST00000140227.2	ENSMUSG00000071533.12	Pcnp	chr16	protein_coding	PEST proteolytic signal containing nuclear protein
chr16	55844801	55849966	-	55838890	55849966	A3SS	0.2	50	50	ENSMUST00000140227.2	ENSMUSG00000071533.12	Pcnp	chr16	protein_coding	PEST proteolytic signal containing nuclear protein
chr16	55845000	55849966	-	55838890	55849966	A3SS	0.2	50	50	ENSMUST00000140227.2	ENSMUSG00000071533.12	Pcnp	chr16	protein_coding	PEST proteolytic signal containing nuclear protein
chr16	55844801	55849966	-	55844801	55844897	5pMXE	0.5	50	50	ENSMUST00000096021.10	ENSMUSG00000071533.12	Pcnp	chr16	protein_coding	PEST proteolytic signal containing nuclear protein
chr16	55895941	55902719	+	55895941	55896506	3pMXE	0.5	50	50	ENSMUST00000201218.2	ENSMUSG00000052917.16	Senp7	chr16	protein_coding	SUMO1/sentrin specific peptidase 7
chr16	56000941	56005124	+	56000941;56004553	56004510;56005124	ES	0.5	50	50	ENSMUST00000089360.10	ENSMUSG00000052917.16	Senp7	chr16	protein_coding	SUMO1/sentrin specific peptidase 7
chr16	55902771;55909827	55909747;55917703	+	55902771	55917703	cassetteExon	0.5	100	100	ENSMUST00000089360.10	ENSMUSG00000052917.16	Senp7	chr16	protein_coding	SUMO1/sentrin specific peptidase 7
chr16	56006572;56007933	56007833;56008598	+	56006572	56008598	cassetteExon	0.5	100	100	ENSMUST00000089360.10	ENSMUSG00000052917.16	Senp7	chr16	protein_coding	SUMO1/sentrin specific peptidase 7
chr16	55902771	55907763	+	55902771	55917703	A3SS	0.33	50	50	ENSMUST00000089360.10	ENSMUSG00000052917.16	Senp7	chr16	protein_coding	SUMO1/sentrin specific peptidase 7
chr16	55944333	55946504	+	55944333	55959348	A3SS	0.5	50	50	ENSMUST00000089360.10	ENSMUSG00000052917.16	Senp7	chr16	protein_coding	SUMO1/sentrin specific peptidase 7
chr16	55959463	55959874	+	55959463	55971637	A3SS	0.5	50	50	ENSMUST00000089360.10	ENSMUSG00000052917.16	Senp7	chr16	protein_coding	SUMO1/sentrin specific peptidase 7
chr16	56005192	56006362	+	56005192	56006422	A3SS	0.5	50	50	ENSMUST00000089360.10	ENSMUSG00000052917.16	Senp7	chr16	protein_coding	SUMO1/sentrin specific peptidase 7
chr16	56004122	56004510	+	56000941	56004510	A5SS	0.5	50	50	ENSMUST00000089360.10	ENSMUSG00000052917.16	Senp7	chr16	protein_coding	SUMO1/sentrin specific peptidase 7
chr16	55902771	55909747	+	55902771;55907880	55907763;55909747	ES	0.5	50	50	ENSMUST00000201915.5	ENSMUSG00000052917.16	Senp7	chr16	protein_coding	SUMO1/sentrin specific peptidase 7
chr16	56000941	56005124	+	56004553	56005124	5pMXE	0.5	50	50	ENSMUST00000202272.4	ENSMUSG00000052917.16	Senp7	chr16	protein_coding	SUMO1/sentrin specific peptidase 7
chr16	56006572	56008598	+	56006421	56008598	A5SS	0.33	50	50	ENSMUST00000202272.4	ENSMUSG00000052917.16	Senp7	chr16	protein_coding	SUMO1/sentrin specific peptidase 7
chr16	56007933	56008598	+	56006421	56008598	A5SS	0.33	50	50	ENSMUST00000202272.4	ENSMUSG00000052917.16	Senp7	chr16	protein_coding	SUMO1/sentrin specific peptidase 7
chr16	56025682	56031591	+	56025682	56038677	A3SS	0.5	50	50	ENSMUST00000160116.8	ENSMUSG00000035270.16	Impg2	chr16	protein_coding	interphotoreceptor matrix proteoglycan 2
chr16	56072710	56074526	+	56072710	56078508	A3SS	0.5	50	50	ENSMUST00000160116.8	ENSMUSG00000035270.16	Impg2	chr16	protein_coding	interphotoreceptor matrix proteoglycan 2
chr16	56090599	56091143	+	56089448	56091143	A5SS	0.5	50	50	ENSMUST00000160116.8	ENSMUSG00000035270.16	Impg2	chr16	protein_coding	interphotoreceptor matrix proteoglycan 2
chr16	56413044	56462852	+	56413044	56414825	3pMXE	0.5	50	50	ENSMUST00000231337.2	ENSMUSG00000035258.16	Abi3bp	chr16	protein_coding	ABI family member 3 binding protein
chr16	56413044;56414899	56414825;56462852	+	56413044	56462852	cassetteExon	0.5	100	100	ENSMUST00000231832.2	ENSMUSG00000035258.16	Abi3bp	chr16	protein_coding	ABI family member 3 binding protein
chr16	56467462;56471133	56471074;56472500	+	56467462	56472500	cassetteExon	0.5	100	100	ENSMUST00000231832.2	ENSMUSG00000035258.16	Abi3bp	chr16	protein_coding	ABI family member 3 binding protein
chr16	56426556	56462852	+	56413044	56462852	A5SS	0.2	50	50	ENSMUST00000231832.2	ENSMUSG00000035258.16	Abi3bp	chr16	protein_coding	ABI family member 3 binding protein
chr16	56435115	56462852	+	56413044	56462852	A5SS	0.2	50	50	ENSMUST00000231832.2	ENSMUSG00000035258.16	Abi3bp	chr16	protein_coding	ABI family member 3 binding protein
chr16	56457487	56462852	+	56413044	56462852	A5SS	0.2	50	50	ENSMUST00000231832.2	ENSMUSG00000035258.16	Abi3bp	chr16	protein_coding	ABI family member 3 binding protein
chr16	56471717	56472500	+	56467462	56472500	A5SS	0.33	50	50	ENSMUST00000231832.2	ENSMUSG00000035258.16	Abi3bp	chr16	protein_coding	ABI family member 3 binding protein
chr16	56471133	56472500	+	56471133;56471717	56471670;56472500	ES	0.33	50	50	ENSMUST00000096013.11	ENSMUSG00000035258.16	Abi3bp	chr16	protein_coding	ABI family member 3 binding protein
chr16	56426556	56431406	+	56426556	56462852	A3SS	0.5	50	50	ENSMUST00000096013.11	ENSMUSG00000035258.16	Abi3bp	chr16	protein_coding	ABI family member 3 binding protein
chr16	56435115	56462852	+	56426556	56462852	A5SS	0.2	50	50	ENSMUST00000096013.11	ENSMUSG00000035258.16	Abi3bp	chr16	protein_coding	ABI family member 3 binding protein
chr16	56457487	56462852	+	56426556	56462852	A5SS	0.2	50	50	ENSMUST00000096013.11	ENSMUSG00000035258.16	Abi3bp	chr16	protein_coding	ABI family member 3 binding protein
chr16	56435115	56435928	+	56435115	56462852	A3SS	0.5	50	50	ENSMUST00000048471.15	ENSMUSG00000035258.16	Abi3bp	chr16	protein_coding	ABI family member 3 binding protein
chr16	56457487	56462852	+	56435115	56462852	A5SS	0.2	50	50	ENSMUST00000048471.15	ENSMUSG00000035258.16	Abi3bp	chr16	protein_coding	ABI family member 3 binding protein
chr16	56414899	56415603	+	56414899	56462852	A3SS	0.5	50	50	ENSMUST00000171000.3	ENSMUSG00000035258.16	Abi3bp	chr16	protein_coding	ABI family member 3 binding protein
chr16	56426556	56462852	+	56414899	56462852	A5SS	0.2	50	50	ENSMUST00000171000.3	ENSMUSG00000035258.16	Abi3bp	chr16	protein_coding	ABI family member 3 binding protein
chr16	56435115	56462852	+	56414899	56462852	A5SS	0.2	50	50	ENSMUST00000171000.3	ENSMUSG00000035258.16	Abi3bp	chr16	protein_coding	ABI family member 3 binding protein
chr16	56457487	56462852	+	56414899	56462852	A5SS	0.2	50	50	ENSMUST00000171000.3	ENSMUSG00000035258.16	Abi3bp	chr16	protein_coding	ABI family member 3 binding protein
chr16	56511516;56512279	56512239;56514763	-	56511516	56514763	cassetteExon	0.5	100	100	ENSMUST00000065515.14	ENSMUSG00000022757.20	Tfg	chr16	protein_coding	Trk-fused gene
chr16	56523986	56524790	-	56521599	56524790	A3SS	0.5	50	50	ENSMUST00000065515.14	ENSMUSG00000022757.20	Tfg	chr16	protein_coding	Trk-fused gene
chr16	56533203	56537504	-	56533203	56537548	A5SS	0.33	50	50	ENSMUST00000065515.14	ENSMUSG00000022757.20	Tfg	chr16	protein_coding	Trk-fused gene
chr16	56533203	56537599	-	56533203	56537548	A5SS	0.33	50	50	ENSMUST00000065515.14	ENSMUSG00000022757.20	Tfg	chr16	protein_coding	Trk-fused gene
chr16	56533203	56537504	-	56533203	56537599	A5SS	0.33	50	50	ENSMUST00000128551.8	ENSMUSG00000022757.20	Tfg	chr16	protein_coding	Trk-fused gene
chr16	56627139;56630434	56630262;56631889	-	56627139	56631889	cassetteExon	0.5	100	100	ENSMUST00000023435.6	ENSMUSG00000022754.7	Tmem45a	chr16	protein_coding	transmembrane protein 45a
chr16	56646221	56652067	-	56646221	56706176	A5SS	0.33	50	50	ENSMUST00000023435.6	ENSMUSG00000022754.7	Tmem45a	chr16	protein_coding	transmembrane protein 45a
chr16	56646221	56688006	-	56646221	56706176	A5SS	0.33	50	50	ENSMUST00000023435.6	ENSMUSG00000022754.7	Tmem45a	chr16	protein_coding	transmembrane protein 45a
chr16	56646221	56652067	-	56646221	56688006	A5SS	0.33	50	50	ENSMUST00000232373.2	ENSMUSG00000022754.7	Tmem45a	chr16	protein_coding	transmembrane protein 45a
chr16	56707070	56721691	+	56707070	56709546	3pMXE	0.5	50	50	ENSMUST00000138684.2	ENSMUSG00000084999.3	Gm15839	chr16	lncRNA	predicted gene 15839
chr16	56981567	56983881	-	56981567;56982147	56982054;56983881	ES	0.5	50	50	ENSMUST00000023432.10	ENSMUSG00000022751.10	Nit2	chr16	protein_coding	nitrilase family, member 2
chr16	56977995	56979781	-	56977902	56979781	A3SS	0.5	50	50	ENSMUST00000023432.10	ENSMUSG00000022751.10	Nit2	chr16	protein_coding	nitrilase family, member 2
chr16	56993522;56994146	56993690;56998295	-	56993522	56998295	cassetteExon	0.5	100	100	ENSMUST00000023431.8	ENSMUSG00000022749.9	Tbc1d23	chr16	protein_coding	TBC1 domain family, member 23
chr16	56998383;57001899	57001855;57003214	-	56998383	57003214	cassetteExon	0.5	100	100	ENSMUST00000023431.8	ENSMUSG00000022749.9	Tbc1d23	chr16	protein_coding	TBC1 domain family, member 23
chr16	57032853	57034527	-	57032938	57034527	A3SS	0.5	50	50	ENSMUST00000023431.8	ENSMUSG00000022749.9	Tbc1d23	chr16	protein_coding	TBC1 domain family, member 23
chr16	57019133	57021421	-	57019133	57019222	A5SS&ES	0.5	50	50	ENSMUST00000023431.8	ENSMUSG00000022749.9	Tbc1d23	chr16	protein_coding	TBC1 domain family, member 23
chr16	57019346	57021421	-	57019346	57028567	A5SS	0.5	50	50	ENSMUST00000023431.8	ENSMUSG00000022749.9	Tbc1d23	chr16	protein_coding	TBC1 domain family, member 23
chr16	56998383	57003214	-	57001899	57003214	3pMXE	0.5	50	50	ENSMUST00000226486.2	ENSMUSG00000022749.9	Tbc1d23	chr16	protein_coding	TBC1 domain family, member 23
chr16	57019133;57019346	57019222;57021421	-	57019133	57021421	cassetteExon	0.5	100	100	ENSMUST00000231391.2	ENSMUSG00000022749.9	Tbc1d23	chr16	protein_coding	TBC1 domain family, member 23
chr16	57265354	57427029	-	57143906	57427029	A3SS	0.33	50	50	ENSMUST00000114371.5	ENSMUSG00000022748.9	Cmss1	chr16	protein_coding	cms small ribosomal subunit 1
chr16	57382125	57427029	-	57143906	57427029	A3SS	0.33	50	50	ENSMUST00000114371.5	ENSMUSG00000022748.9	Cmss1	chr16	protein_coding	cms small ribosomal subunit 1
chr16	57382125	57427029	-	57265354	57427029	A3SS	0.33	50	50	ENSMUST00000231282.2	ENSMUSG00000022748.9	Cmss1	chr16	protein_coding	cms small ribosomal subunit 1
chr16	57333807	57335269	+	57333807	57390013	A3SS	0.5	50	50	ENSMUST00000159816.8	ENSMUSG00000043336.15	Filip1l	chr16	protein_coding	filamin A interacting protein 1-like
chr16	57369702	57390013	+	57333807	57390013	A5SS	0.5	50	50	ENSMUST00000159816.8	ENSMUSG00000043336.15	Filip1l	chr16	protein_coding	filamin A interacting protein 1-like
chr16	58281219	58281318	+	58276771	58281318	A5SS	0.5	50	50	ENSMUST00000046663.8	ENSMUSG00000035107.14	Dcbld2	chr16	protein_coding	discoidin, CUB and LCCL domain containing 2
chr16	58284686	58285686	+	58284690	58285686	A5SS	0.5	50	50	ENSMUST00000046663.8	ENSMUSG00000035107.14	Dcbld2	chr16	protein_coding	discoidin, CUB and LCCL domain containing 2
chr16	58314224	58343439	-	58314224;58327977	58327811;58343439	ES	0.5	50	50	ENSMUST00000137035.8	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58327977	58343865	-	58327977	58343439	5pMXE	0.16	50	50	ENSMUST00000137035.8	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58327977	58344290	-	58327977	58343439	5pMXE	0.16	50	50	ENSMUST00000137035.8	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58327977	58344487	-	58327977	58343439	5pMXE	0.16	50	50	ENSMUST00000137035.8	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58323609	58327811	-	58314224	58327811	A3SS	0.33	50	50	ENSMUST00000137035.8	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58314224	58319454	-	58314224	58327811	A5SS	0.33	50	50	ENSMUST00000137035.8	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58327977	58334456	-	58327977	58343439	A5SS	0.16	50	50	ENSMUST00000137035.8	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58327977	58343680	-	58327977	58343439	A5SS	0.16	50	50	ENSMUST00000137035.8	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58314224;58344035	58343865;58344487	-	58314224;58327977	58327811;58344487	MXE	0.5	100	100	ENSMUST00000114358.9	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58327977;58344035	58343680;58344487	-	58327977	58344487	cassetteExon	0.5	100	100	ENSMUST00000114358.9	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58327977;58344035	58343865;58344487	-	58327977	58344487	cassetteExon	0.5	100	100	ENSMUST00000114358.9	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58327977;58344395	58344290;58344487	-	58327977	58344487	cassetteExon	0.5	100	100	ENSMUST00000114358.9	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58314224	58343439	-	58314224	58327811	A5SS&ES	0.25	50	50	ENSMUST00000114358.9	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58327977	58334456	-	58327977	58344487	A5SS	0.16	50	50	ENSMUST00000114358.9	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58314224	58343865	-	58314224;58327977	58327811;58343865	ES	0.5	50	50	ENSMUST00000114357.10	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58327977;58344395	58344290;58344487	-	58327977;58344035	58343865;58344487	MXE	0.5	100	100	ENSMUST00000114357.10	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58344035;58344395	58344290;58344487	-	58344035	58344487	cassetteExon	0.5	100	100	ENSMUST00000114357.10	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58327977	58334456	-	58327977	58343865	A5SS	0.16	50	50	ENSMUST00000114357.10	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58327977	58343680	-	58327977	58343865	A5SS	0.16	50	50	ENSMUST00000114357.10	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58327977	58344290	-	58327977	58343865	5pMXE	0.16	50	50	ENSMUST00000149197.8	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58327977	58344487	-	58327977	58343865	5pMXE	0.16	50	50	ENSMUST00000149197.8	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58314224	58327811	-	58305189	58327811	A3SS	0.33	50	50	ENSMUST00000149197.8	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58314224	58343865	-	58327977	58343865	A3SS&ES	0.5	50	50	ENSMUST00000149197.8	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58323609	58327811	-	58305189	58327811	A3SS	0.33	50	50	ENSMUST00000149197.8	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58305189	58306758	-	58305189	58327811	A5SS	0.5	50	50	ENSMUST00000149197.8	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58327977	58344290	-	58327977	58343680	5pMXE	0.16	50	50	ENSMUST00000149456.8	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58327977	58344487	-	58327977	58343680	5pMXE	0.16	50	50	ENSMUST00000149456.8	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58327977	58334456	-	58327977	58343680	A5SS	0.16	50	50	ENSMUST00000149456.8	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58314224	58319454	-	58314224	58343865	A5SS	0.25	50	50	ENSMUST00000126978.8	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58314224	58343439	-	58314224	58343865	A5SS	0.25	50	50	ENSMUST00000126978.8	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58314224;58344035	58343865;58344290	-	58314224;58327977	58327811;58344290	MXE	0.5	100	100	ENSMUST00000123918.8	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58327977;58344035	58343680;58344290	-	58327977	58344290	cassetteExon	0.5	100	100	ENSMUST00000123918.8	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58327977;58344035	58343865;58344290	-	58327977	58344290	cassetteExon	0.5	100	100	ENSMUST00000123918.8	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58314224;58344035	58343865;58344487	-	58314224;58344395	58327811;58344487	MXE	0.5	100	100	ENSMUST00000123918.8	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58327977;58344035	58343680;58344487	-	58327977;58344395	58344290;58344487	MXE	0.5	100	100	ENSMUST00000123918.8	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58327977	58334456	-	58327977	58344290	A5SS	0.16	50	50	ENSMUST00000123918.8	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58314224	58343439	-	58314224	58319454	5pMXE	0.25	50	50	ENSMUST00000148061.2	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58344035	58344487	-	58344035	58344290	A5SS	0.5	50	50	ENSMUST00000151510.2	ENSMUSG00000022747.18	St3gal6	chr16	protein_coding	ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr16	58535849	58537492	+	58498307	58537492	A5SS	0.5	50	50	ENSMUST00000232532.2	ENSMUSG00000022742.7	Cpox	chr16	protein_coding	coproporphyrinogen oxidase
chr16	58551775	58553202	+	58551775;58553081	58552944;58553202	ES	0.5	50	50	ENSMUST00000023426.12	ENSMUSG00000022744.13	Cldnd1	chr16	protein_coding	claudin domain containing 1
chr16	58548447;58549586	58549521;58549801	+	58548447	58549801	cassetteExon	0.5	100	100	ENSMUST00000023426.12	ENSMUSG00000022744.13	Cldnd1	chr16	protein_coding	claudin domain containing 1
chr16	58548447;58549586	58549536;58549801	+	58548447	58549801	cassetteExon	0.5	100	100	ENSMUST00000023426.12	ENSMUSG00000022744.13	Cldnd1	chr16	protein_coding	claudin domain containing 1
chr16	58548447;58549586	58549543;58549801	+	58548447	58549801	cassetteExon	0.5	100	100	ENSMUST00000023426.12	ENSMUSG00000022744.13	Cldnd1	chr16	protein_coding	claudin domain containing 1
chr16	58550110	58551632	+	58550110	58551665	A3SS	0.5	50	50	ENSMUST00000023426.12	ENSMUSG00000022744.13	Cldnd1	chr16	protein_coding	claudin domain containing 1
chr16	58548447	58549521	+	58548447	58549536	A3SS	0.25	50	50	ENSMUST00000162057.8	ENSMUSG00000022744.13	Cldnd1	chr16	protein_coding	claudin domain containing 1
chr16	58548447	58549543	+	58548447	58549536	A3SS	0.25	50	50	ENSMUST00000162057.8	ENSMUSG00000022744.13	Cldnd1	chr16	protein_coding	claudin domain containing 1
chr16	58548447	58549521	+	58548447	58549543	A3SS	0.25	50	50	ENSMUST00000159829.2	ENSMUSG00000022744.13	Cldnd1	chr16	protein_coding	claudin domain containing 1
chr16	58551775	58553202	+	58553081	58553202	5pMXE	0.5	50	50	ENSMUST00000162249.2	ENSMUSG00000022744.13	Cldnd1	chr16	protein_coding	claudin domain containing 1
chr16	58645081	58647034	-	58645121	58647034	A3SS	0.5	50	50	ENSMUST00000215069.2	ENSMUSG00000060663.7	Olfr175	chr16	protein_coding	olfactory receptor 175
chr16	58710588	58712242	-	58710585	58712242	A3SS	0.5	50	50	ENSMUST00000206523.3	ENSMUSG00000044029.7	Olfr178	chr16	protein_coding	olfactory receptor 178
chr16	58737015	58738672	-	58737015	58749308	A5SS	0.5	50	50	ENSMUST00000206168.2	ENSMUSG00000090629.3	Olfr180	chr16	protein_coding	olfactory receptor 180
chr16	58737015	58738672	-	58737012	58738672	A3SS	0.5	50	50	ENSMUST00000171656.3	ENSMUSG00000090629.3	Olfr180	chr16	protein_coding	olfactory receptor 180
chr16	58746939	58748642	-	58746944	58748642	A3SS	0.5	50	50	ENSMUST00000214942.2	ENSMUSG00000090951.5	Olfr181	chr16	protein_coding	olfactory receptor 181
chr16	58815808;58816014	58815971;58820032	+	58815808	58820032	cassetteExon	0.5	100	100	ENSMUST00000206303.3	ENSMUSG00000062105.6	Olfr183	chr16	protein_coding	olfactory receptor 183
chr16	58815808;58819119	58818777;58820032	+	58815808	58820032	cassetteExon	0.5	100	100	ENSMUST00000206303.3	ENSMUSG00000062105.6	Olfr183	chr16	protein_coding	olfactory receptor 183
chr16	58815808	58818777	+	58815808;58816014	58815971;58818777	ES	0.5	50	50	ENSMUST00000214916.2	ENSMUSG00000062105.6	Olfr183	chr16	protein_coding	olfactory receptor 183
chr16	58816014	58820032	+	58816014;58819119	58818777;58820032	ES	0.33	50	50	ENSMUST00000214916.2	ENSMUSG00000062105.6	Olfr183	chr16	protein_coding	olfactory receptor 183
chr16	58815808;58819119	58818777;58820032	+	58815808;58816014	58815971;58820032	MXE	0.5	100	100	ENSMUST00000214831.2	ENSMUSG00000062105.6	Olfr183	chr16	protein_coding	olfactory receptor 183
chr16	58815808	58820032	+	58816014	58820032	A5SS	0.33	50	50	ENSMUST00000073320.5	ENSMUSG00000062105.6	Olfr183	chr16	protein_coding	olfactory receptor 183
chr16	58848289	58850577	-	58848289	58850449	A5SS	0.5	50	50	ENSMUST00000216415.2	ENSMUSG00000047960.5	Olfr186	chr16	protein_coding	olfactory receptor 186
chr16	58919377	58922110	-	58919377	58919851	5pMXE	0.5	50	50	ENSMUST00000206214.3	ENSMUSG00000108464.6	Olfr192	chr16	polymorphic_pseudogene	olfactory receptor 192
chr16	58930988	58932081	-	58930988	58932092	A5SS	0.5	50	50	ENSMUST00000208455.3	ENSMUSG00000060057.5	Olfr193	chr16	protein_coding	olfactory receptor 193
chr16	58940452	58941281	-	58940452	58941307	A5SS	0.5	50	50	ENSMUST00000213228.2	ENSMUSG00000063020.3	Olfr194	chr16	protein_coding	olfactory receptor 194
chr16	59104864	59105930	-	59104860	59105930	A3SS	0.5	50	50	ENSMUST00000201687.3	ENSMUSG00000048810.3	Olfr202	chr16	protein_coding	olfactory receptor 202
chr16	59288500	59289548	-	59284462	59289548	A3SS	0.5	50	50	ENSMUST00000185295.2	ENSMUSG00000099983.2	1700022E09Rik	chr16	lncRNA	RIKEN cDNA 1700022E09 gene
chr16	59307962;59309929	59309853;59311568	+	59307962;59309796	59309708;59311568	MXE	0.5	100	100	ENSMUST00000023407.12	ENSMUSG00000022724.16	Riox2	chr16	protein_coding	ribosomal oxygenase 2
chr16	59292856	59295873	+	59292308	59295873	A5SS	0.33	50	50	ENSMUST00000023407.12	ENSMUSG00000022724.16	Riox2	chr16	protein_coding	ribosomal oxygenase 2
chr16	59293260	59295873	+	59292308	59295873	A5SS	0.33	50	50	ENSMUST00000023407.12	ENSMUSG00000022724.16	Riox2	chr16	protein_coding	ribosomal oxygenase 2
chr16	59293260	59295873	+	59292856	59295873	A5SS	0.33	50	50	ENSMUST00000160571.2	ENSMUSG00000022724.16	Riox2	chr16	protein_coding	ribosomal oxygenase 2
chr16	59307962	59309708	+	59307962	59309853	A3SS	0.5	50	50	ENSMUST00000131272.3	ENSMUSG00000022724.16	Riox2	chr16	protein_coding	ribosomal oxygenase 2
chr16	59346901	59349586	-	59345333	59349586	A3SS	0.33	50	50	ENSMUST00000044604.16	ENSMUSG00000022723.17	Crybg3	chr16	protein_coding	beta-gamma crystallin domain containing 3
chr16	59372937	59374068	-	59372937	59374470	A5SS	0.5	50	50	ENSMUST00000044604.16	ENSMUSG00000022723.17	Crybg3	chr16	protein_coding	beta-gamma crystallin domain containing 3
chr16	59345333	59349586	-	59326683	59349586	A3SS	0.33	50	50	ENSMUST00000232544.2	ENSMUSG00000022723.17	Crybg3	chr16	protein_coding	beta-gamma crystallin domain containing 3
chr16	59346901	59349586	-	59326683	59349586	A3SS	0.33	50	50	ENSMUST00000232544.2	ENSMUSG00000022723.17	Crybg3	chr16	protein_coding	beta-gamma crystallin domain containing 3
chr16	59326683	59342447	-	59326683	59349586	A5SS	0.5	50	50	ENSMUST00000232544.2	ENSMUSG00000022723.17	Crybg3	chr16	protein_coding	beta-gamma crystallin domain containing 3
chr16	59434207;59439041	59439029;59439158	-	59434207	59439158	cassetteExon	0.5	100	100	ENSMUST00000023405.16	ENSMUSG00000022722.19	Arl6	chr16	protein_coding	ADP-ribosylation factor-like 6
chr16	59441711;59442871	59442767;59443384	-	59441711	59443384	cassetteExon	0.5	100	100	ENSMUST00000023405.16	ENSMUSG00000022722.19	Arl6	chr16	protein_coding	ADP-ribosylation factor-like 6
chr16	59490860	59493090	+	59490860	59493138	A3SS	0.5	50	50	ENSMUST00000232158.2	ENSMUSG00000116894.2	4930547E14Rik	chr16	lncRNA	RIKEN cDNA 4930547E14 gene
chr16	59461553	59490772	+	59457548	59490772	A5SS	0.5	50	50	ENSMUST00000232158.2	ENSMUSG00000116894.2	4930547E14Rik	chr16	lncRNA	RIKEN cDNA 4930547E14 gene
chr16	59580804	59595906	-	59503121	59595906	A3SS	0.5	50	50	ENSMUST00000068860.13	ENSMUSG00000055540.16	Epha6	chr16	protein_coding	Eph receptor A6
chr16	60304273	60346812	-	60245747	60346812	A3SS	0.5	50	50	ENSMUST00000068860.13	ENSMUSG00000055540.16	Epha6	chr16	protein_coding	Eph receptor A6
chr16	60426234	60429395	+	60425333	60429395	A5SS	0.5	50	50	ENSMUST00000160040.8	ENSMUSG00000089685.8	Gm9017	chr16	lncRNA	predicted gene 9017
chr16	62591175;62592099	62592062;62596651	-	62591175	62596651	cassetteExon	0.5	100	100	ENSMUST00000063089.12	ENSMUSG00000050312.13	Nsun3	chr16	protein_coding	NOL1/NOP2/Sun domain family member 3
chr16	62596746	62606151	-	62596994	62606151	A3SS	0.33	50	50	ENSMUST00000063089.12	ENSMUSG00000050312.13	Nsun3	chr16	protein_coding	NOL1/NOP2/Sun domain family member 3
chr16	62600352	62606151	-	62596994	62606151	A3SS	0.33	50	50	ENSMUST00000063089.12	ENSMUSG00000050312.13	Nsun3	chr16	protein_coding	NOL1/NOP2/Sun domain family member 3
chr16	62555781	62587424	-	62555781	62589970	A5SS	0.5	50	50	ENSMUST00000063089.12	ENSMUSG00000050312.13	Nsun3	chr16	protein_coding	NOL1/NOP2/Sun domain family member 3
chr16	62606260	62607119	-	62606260	62607034	A5SS	0.5	50	50	ENSMUST00000063089.12	ENSMUSG00000050312.13	Nsun3	chr16	protein_coding	NOL1/NOP2/Sun domain family member 3
chr16	62600352	62606151	-	62596746	62606151	A3SS	0.33	50	50	ENSMUST00000143314.8	ENSMUSG00000050312.13	Nsun3	chr16	protein_coding	NOL1/NOP2/Sun domain family member 3
chr16	62616071	62623083	-	62616071;62622153	62622085;62623083	ES	0.5	50	50	ENSMUST00000089289.6	ENSMUSG00000022911.12	Arl13b	chr16	protein_coding	ADP-ribosylation factor-like 13B
chr16	62647776	62667048	-	62647776;62651176	62651106;62667048	ES	0.5	50	50	ENSMUST00000089289.6	ENSMUSG00000022911.12	Arl13b	chr16	protein_coding	ADP-ribosylation factor-like 13B
chr16	62741887	62744879	+	62740044	62744879	A5SS	0.5	50	50	ENSMUST00000023629.9	ENSMUSG00000022912.9	Pros1	chr16	protein_coding	protein S (alpha)
chr16	63473941	63664466	-	63473941;63593933	63593273;63664466	ES	0.33	50	50	ENSMUST00000064405.8	ENSMUSG00000052504.8	Epha3	chr16	protein_coding	Eph receptor A3
chr16	63593933;63596251	63596102;63664466	-	63593933	63664466	cassetteExon	0.5	100	100	ENSMUST00000064405.8	ENSMUSG00000052504.8	Epha3	chr16	protein_coding	Eph receptor A3
chr16	63431468	63433213	-	63431471	63433213	A3SS	0.5	50	50	ENSMUST00000064405.8	ENSMUSG00000052504.8	Epha3	chr16	protein_coding	Eph receptor A3
chr16	63664530	63683734	-	63664530	63684323	A5SS	0.5	50	50	ENSMUST00000064405.8	ENSMUSG00000052504.8	Epha3	chr16	protein_coding	Eph receptor A3
chr16	63593933	63664466	-	63473941	63664466	A3SS	0.33	50	50	ENSMUST00000232461.2	ENSMUSG00000052504.8	Epha3	chr16	protein_coding	Eph receptor A3
chr16	63596251	63664466	-	63473941	63664466	A3SS	0.33	50	50	ENSMUST00000232461.2	ENSMUSG00000052504.8	Epha3	chr16	protein_coding	Eph receptor A3
chr16	63473941	63593273	-	63473941	63664466	A5SS	0.5	50	50	ENSMUST00000232461.2	ENSMUSG00000052504.8	Epha3	chr16	protein_coding	Eph receptor A3
chr16	65317656	65320371	+	65317656	65320449	A3SS	0.5	50	50	ENSMUST00000176330.8	ENSMUSG00000004842.19	Pou1f1	chr16	protein_coding	POU domain, class 1, transcription factor 1
chr16	65347940	65359361	-	65347940;65350960	65350905;65359361	ES	0.5	50	50	ENSMUST00000231259.2	ENSMUSG00000004843.8	Chmp2b	chr16	protein_coding	charged multivesicular body protein 2B
chr16	65612644	65624945	+	65612644	65624780	A3SS	0.5	50	50	ENSMUST00000168064.3	ENSMUSG00000091243.3	Vgll3	chr16	protein_coding	vestigial like family member 3
chr16	65625593	65636095	+	65625062	65636095	A5SS	0.5	50	50	ENSMUST00000168064.3	ENSMUSG00000091243.3	Vgll3	chr16	protein_coding	vestigial like family member 3
chr16	66679770	67417059	-	66679770;66750188	66750162;67417059	ES	0.33	50	50	ENSMUST00000114292.8	ENSMUSG00000064115.14	Cadm2	chr16	protein_coding	cell adhesion molecule 2
chr16	66461392;66528390	66528271;66544085	-	66461392	66544085	cassetteExon	0.5	100	100	ENSMUST00000114292.8	ENSMUSG00000064115.14	Cadm2	chr16	protein_coding	cell adhesion molecule 2
chr16	66679770	66722382	-	66679770	66750162	A5SS	0.33	50	50	ENSMUST00000114292.8	ENSMUSG00000064115.14	Cadm2	chr16	protein_coding	cell adhesion molecule 2
chr16	66679770	66722382	-	66679770	67417059	A5SS	0.33	50	50	ENSMUST00000120594.8	ENSMUSG00000064115.14	Cadm2	chr16	protein_coding	cell adhesion molecule 2
chr16	66679770	67417059	-	66679770	66750162	5pMXE	0.33	50	50	ENSMUST00000128168.3	ENSMUSG00000064115.14	Cadm2	chr16	protein_coding	cell adhesion molecule 2
chr16	66679770	67417059	-	66581774	67417059	A3SS	0.33	50	50	ENSMUST00000123266.2	ENSMUSG00000064115.14	Cadm2	chr16	protein_coding	cell adhesion molecule 2
chr16	66750188	67417059	-	66581774	67417059	A3SS	0.33	50	50	ENSMUST00000123266.2	ENSMUSG00000064115.14	Cadm2	chr16	protein_coding	cell adhesion molecule 2
chr16	66581774	66609618	-	66581774	67417059	A5SS	0.5	50	50	ENSMUST00000123266.2	ENSMUSG00000064115.14	Cadm2	chr16	protein_coding	cell adhesion molecule 2
chr16	66691157	66705422	+	66691157	66697795	3pMXE	0.5	50	50	ENSMUST00000146849.8	ENSMUSG00000045178.11	4933411O13Rik	chr16	lncRNA	RIKEN cDNA 4933411O13 gene
chr16	66689458	66691008	+	66689564	66691008	A5SS	0.5	50	50	ENSMUST00000146849.8	ENSMUSG00000045178.11	4933411O13Rik	chr16	lncRNA	RIKEN cDNA 4933411O13 gene
chr16	69654114	69655640	-	69654114;69655011	69654831;69655640	ES	0.5	50	50	ENSMUST00000076500.14	ENSMUSG00000063163.14	Speer2	chr16	protein_coding	spermatogenesis associated glutamate (E)-rich protein 2
chr16	70325895	70357905	+	70325895	70357905	A3SS	1	50	0	ENSMUST00000023393.15	ENSMUSG00000022707.17	Gbe1	chr16	protein_coding	glucan (1,4-alpha-), branching enzyme 1
chr16	70357905	70357910	+	70357905	70357910	A5SS	1	50	0	ENSMUST00000023393.15	ENSMUSG00000022707.17	Gbe1	chr16	protein_coding	glucan (1,4-alpha-), branching enzyme 1
chr16	70415036	70418021	+	70413447	70418021	A5SS	0.5	50	50	ENSMUST00000232518.2	ENSMUSG00000116792.2	D16Ertd519e	chr16	lncRNA	DNA segment, Chr 16, ERATO Doi 519, expressed
chr16	72027365	72028116	-	72027368	72028116	A3SS	0.5	50	50	ENSMUST00000231223.2	ENSMUSG00000116769.2	8030451O07Rik	chr16	lncRNA	RIKEN cDNA 8030451O07 gene
chr16	72024503	72027251	-	72024503	72027264	A5SS	0.5	50	50	ENSMUST00000231223.2	ENSMUSG00000116769.2	8030451O07Rik	chr16	lncRNA	RIKEN cDNA 8030451O07 gene
chr16	72360671	72539014	+	72105447	72539014	A5SS	0.33	50	50	ENSMUST00000231580.2	ENSMUSG00000022883.12	Robo1	chr16	protein_coding	roundabout guidance receptor 1
chr16	72461082	72539014	+	72105447	72539014	A5SS	0.33	50	50	ENSMUST00000231580.2	ENSMUSG00000022883.12	Robo1	chr16	protein_coding	roundabout guidance receptor 1
chr16	72732674	72753163	+	72732674	72756969	A3SS	0.5	50	50	ENSMUST00000232205.2	ENSMUSG00000022883.12	Robo1	chr16	protein_coding	roundabout guidance receptor 1
chr16	72461082	72539014	+	72360671	72539014	A5SS	0.33	50	50	ENSMUST00000232205.2	ENSMUSG00000022883.12	Robo1	chr16	protein_coding	roundabout guidance receptor 1
chr16	72869563;72873116	72872928;72895795	+	72869563	72895795	cassetteExon	0.5	100	100	ENSMUST00000232248.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	72895929	72910860	+	72895929	73002444	A3SS	0.25	50	50	ENSMUST00000232248.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	72895929	72934694	+	72895929	73002444	A3SS	0.25	50	50	ENSMUST00000232248.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	72895929	72934922	+	72895929	73002444	A3SS	0.25	50	50	ENSMUST00000232248.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	73207370	73220105	+	73207370;73219839	73219763;73220105	ES	0.5	50	50	ENSMUST00000232549.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	72895929;73198391	73198251;73207242	+	72895929	73207242	cassetteExon	0.5	100	100	ENSMUST00000232549.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	72895929;73198391	73198287;73207242	+	72895929	73207242	cassetteExon	0.5	100	100	ENSMUST00000232549.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	72873116	72890495	+	72873116	72895795	A3SS	0.5	50	50	ENSMUST00000232549.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	72895929	72910860	+	72895929	73207242	A3SS	0.12	50	50	ENSMUST00000232549.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	72895929	72934694	+	72895929	73207242	A3SS	0.12	50	50	ENSMUST00000232549.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	72895929	72934922	+	72895929	73207242	A3SS	0.12	50	50	ENSMUST00000232549.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	72895929	73002444	+	72895929	73207242	A3SS	0.12	50	50	ENSMUST00000232549.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	72895929	73150721	+	72895929	73207242	A3SS	0.12	50	50	ENSMUST00000232549.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	72895929	73150721	+	72895929	72934922	3pMXE	0.12	50	50	ENSMUST00000232059.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	72895929	73198251	+	72895929	72934922	3pMXE	0.12	50	50	ENSMUST00000232059.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	72895929	73198287	+	72895929	72934922	3pMXE	0.12	50	50	ENSMUST00000232059.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	72895929	72910860	+	72895929	72934922	A3SS	0.12	50	50	ENSMUST00000232059.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	72895929	72934694	+	72895929	72934922	A3SS	0.12	50	50	ENSMUST00000232059.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	72895929	72910860	+	72895929	72934694	A3SS	0.33	50	50	ENSMUST00000231534.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	72895929	72910860	+	72895929	73198287	A3SS	0.12	50	50	ENSMUST00000231838.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	72895929	72934694	+	72895929	73198287	A3SS	0.12	50	50	ENSMUST00000231838.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	72895929	73002444	+	72895929	73198287	A3SS	0.12	50	50	ENSMUST00000231838.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	72895929	73150721	+	72895929	73198287	A3SS	0.12	50	50	ENSMUST00000231838.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	72895929	73198251	+	72895929	73198287	A3SS	0.12	50	50	ENSMUST00000231838.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	72895929	72910860	+	72895929	73198251	A3SS	0.12	50	50	ENSMUST00000232394.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	72895929	72934694	+	72895929	73198251	A3SS	0.12	50	50	ENSMUST00000232394.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	72895929	73002444	+	72895929	73198251	A3SS	0.12	50	50	ENSMUST00000232394.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	72895929	73150721	+	72895929	73198251	A3SS	0.12	50	50	ENSMUST00000232394.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	72895929	72910860	+	72895929	73150721	A3SS	0.2	50	50	ENSMUST00000231943.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	72895929	72934694	+	72895929	73150721	A3SS	0.2	50	50	ENSMUST00000231943.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	72895929	73002444	+	72895929	73150721	A3SS	0.2	50	50	ENSMUST00000231943.2	ENSMUSG00000116976.2	4930500H12Rik	chr16	lncRNA	RIKEN cDNA 4930500H12 gene
chr16	73694095	73701271	-	73694095;73696072	73695800;73701271	ES	0.5	50	50	ENSMUST00000117785.9	ENSMUSG00000052516.20	Robo2	chr16	protein_coding	roundabout guidance receptor 2
chr16	73725065	73730475	-	73725065;73730059	73729934;73730475	ES	0.5	50	50	ENSMUST00000117785.9	ENSMUSG00000052516.20	Robo2	chr16	protein_coding	roundabout guidance receptor 2
chr16	73701444;73703887	73703705;73712986	-	73701444	73712986	cassetteExon	0.5	100	100	ENSMUST00000117785.9	ENSMUSG00000052516.20	Robo2	chr16	protein_coding	roundabout guidance receptor 2
chr16	73782600;73805674	73805663;73812759	-	73782600	73812759	cassetteExon	0.5	100	100	ENSMUST00000117785.9	ENSMUSG00000052516.20	Robo2	chr16	protein_coding	roundabout guidance receptor 2
chr16	73692718	73693895	-	73692718	73693904	A5SS	0.5	50	50	ENSMUST00000117785.9	ENSMUSG00000052516.20	Robo2	chr16	protein_coding	roundabout guidance receptor 2
chr16	73812886	73824665	-	73812886	73831873	A5SS	0.5	50	50	ENSMUST00000117785.9	ENSMUSG00000052516.20	Robo2	chr16	protein_coding	roundabout guidance receptor 2
chr16	73701444	73712986	-	73701444	73703705	5pMXE	0.5	50	50	ENSMUST00000137420.2	ENSMUSG00000052516.20	Robo2	chr16	protein_coding	roundabout guidance receptor 2
chr16	73694095	73701271	-	73696072	73701271	3pMXE	0.5	50	50	ENSMUST00000231426.2	ENSMUSG00000052516.20	Robo2	chr16	protein_coding	roundabout guidance receptor 2
chr16	73725065	73730475	-	73725065	73729934	5pMXE	0.5	50	50	ENSMUST00000138852.3	ENSMUSG00000052516.20	Robo2	chr16	protein_coding	roundabout guidance receptor 2
chr16	75362520	75364355	-	75362520	75368183	A5SS	0.5	50	50	ENSMUST00000062721.11	ENSMUSG00000032948.11	Lipi	chr16	protein_coding	lipase, member I
chr16	75443221;75473189	75473121;75474965	+	75443221;75456336	75456240;75474965	MXE	0.5	100	100	ENSMUST00000232244.2	ENSMUSG00000116643.3	Gm30162	chr16	transcribed_unprocessed_pseudogene	predicted gene, 30162
chr16	75475099	75500356	+	75475099	75500360	A3SS	0.5	50	50	ENSMUST00000232244.2	ENSMUSG00000116643.3	Gm30162	chr16	transcribed_unprocessed_pseudogene	predicted gene, 30162
chr16	75475049	75475150	+	75475063	75475150	A5SS	0.5	50	50	ENSMUST00000239086.2	ENSMUSG00000116643.3	Gm30162	chr16	transcribed_unprocessed_pseudogene	predicted gene, 30162
chr16	75555336	75556303	-	75555336;75555615	75555520;75556303	ES	0.5	50	50	ENSMUST00000232633.2	ENSMUSG00000032932.16	Hspa13	chr16	protein_coding	heat shock protein 70 family, member 13
chr16	75555336	75555531	-	75555336	75555520	A5SS	0.33	50	50	ENSMUST00000232633.2	ENSMUSG00000032932.16	Hspa13	chr16	protein_coding	heat shock protein 70 family, member 13
chr16	75555336;75555615	75555531;75556303	-	75555336	75556303	cassetteExon	0.5	100	100	ENSMUST00000046283.16	ENSMUSG00000032932.16	Hspa13	chr16	protein_coding	heat shock protein 70 family, member 13
chr16	75685699	75742118	-	75685699	75706018	5pMXE	0.5	50	50	ENSMUST00000114239.9	ENSMUSG00000022876.19	Samsn1	chr16	protein_coding	SAM domain, SH3 domain and nuclear localization signals, 1
chr16	75744238	75774787	-	75744238	75749831	5pMXE	0.5	50	50	ENSMUST00000226794.2	ENSMUSG00000022876.19	Samsn1	chr16	protein_coding	SAM domain, SH3 domain and nuclear localization signals, 1
chr16	75784156	75809620	-	75774873	75809620	A3SS	0.5	50	50	ENSMUST00000228147.2	ENSMUSG00000022876.19	Samsn1	chr16	protein_coding	SAM domain, SH3 domain and nuclear localization signals, 1
chr16	75774873	75777788	-	75774873	75809620	A5SS	0.5	50	50	ENSMUST00000228147.2	ENSMUSG00000022876.19	Samsn1	chr16	protein_coding	SAM domain, SH3 domain and nuclear localization signals, 1
chr16	75919582	75946295	+	75919582	75950656	A3SS	0.5	50	50	ENSMUST00000232455.2	ENSMUSG00000116695.2	4930578N18Rik	chr16	lncRNA	RIKEN cDNA 4930578N18 gene
chr16	76091903	76149360	-	76091903;76127752	76127634;76149360	ES	0.5	50	50	ENSMUST00000121927.8	ENSMUSG00000048490.15	Nrip1	chr16	protein_coding	nuclear receptor interacting protein 1
chr16	76149437	76170658	-	76149434	76170658	A3SS	0.5	50	50	ENSMUST00000121927.8	ENSMUSG00000048490.15	Nrip1	chr16	protein_coding	nuclear receptor interacting protein 1
chr16	76091903	76120485	-	76091903	76127634	A5SS	0.33	50	50	ENSMUST00000121927.8	ENSMUSG00000048490.15	Nrip1	chr16	protein_coding	nuclear receptor interacting protein 1
chr16	76149434	76169760	-	76149434	76170658	A5SS	0.5	50	50	ENSMUST00000121927.8	ENSMUSG00000048490.15	Nrip1	chr16	protein_coding	nuclear receptor interacting protein 1
chr16	76149437	76170658	-	76149437	76169760	5pMXE	0.5	50	50	ENSMUST00000054178.8	ENSMUSG00000048490.15	Nrip1	chr16	protein_coding	nuclear receptor interacting protein 1
chr16	76149434	76169760	-	76149437	76169760	A3SS	0.5	50	50	ENSMUST00000054178.8	ENSMUSG00000048490.15	Nrip1	chr16	protein_coding	nuclear receptor interacting protein 1
chr16	76091903	76149360	-	76091903	76120485	5pMXE	0.33	50	50	ENSMUST00000140483.2	ENSMUSG00000048490.15	Nrip1	chr16	protein_coding	nuclear receptor interacting protein 1
chr16	76091903	76149360	-	76127752	76149360	3pMXE	0.5	50	50	ENSMUST00000141182.2	ENSMUSG00000048490.15	Nrip1	chr16	protein_coding	nuclear receptor interacting protein 1
chr16	76551188	76559896	-	76551188	76575871	A5SS	0.5	50	50	ENSMUST00000208256.2	ENSMUSG00000109333.2	Gm30790	chr16	lncRNA	predicted gene, 30790
chr16	76644733;76671137	76671015;76685893	-	76644733	76685893	cassetteExon	0.5	100	100	ENSMUST00000208105.2	ENSMUSG00000100857.3	1700041M19Rik	chr16	lncRNA	RIKEN cDNA 1700041M19 gene
chr16	76783039	76807726	-	76686183	76807726	A3SS	0.33	50	50	ENSMUST00000208105.2	ENSMUSG00000100857.3	1700041M19Rik	chr16	lncRNA	RIKEN cDNA 1700041M19 gene
chr16	76804584	76807726	-	76686183	76807726	A3SS	0.33	50	50	ENSMUST00000208105.2	ENSMUSG00000100857.3	1700041M19Rik	chr16	lncRNA	RIKEN cDNA 1700041M19 gene
chr16	76632004	76638606	-	76632004	76644616	A5SS	0.5	50	50	ENSMUST00000208105.2	ENSMUSG00000100857.3	1700041M19Rik	chr16	lncRNA	RIKEN cDNA 1700041M19 gene
chr16	76804584	76807726	-	76783039	76807726	A3SS	0.33	50	50	ENSMUST00000207924.2	ENSMUSG00000100857.3	1700041M19Rik	chr16	lncRNA	RIKEN cDNA 1700041M19 gene
chr16	76890630	76894537	+	76890630	76904773	A3SS	0.5	50	50	ENSMUST00000023580.8	ENSMUSG00000022867.12	Usp25	chr16	protein_coding	ubiquitin specific peptidase 25
chr16	76896634	76904773	+	76890630	76904773	A5SS	0.5	50	50	ENSMUST00000023580.8	ENSMUSG00000022867.12	Usp25	chr16	protein_coding	ubiquitin specific peptidase 25
chr16	77126566	77157551	+	77108740	77157551	A5SS	0.5	50	50	ENSMUST00000183333.8	ENSMUSG00000090386.11	Mir99ahg	chr16	lncRNA	Mir99a and Mirlet7c-1 host gene (non-protein coding)
chr16	77157606	77298391	+	77157606;77256390	77256262;77298391	ES	0.25	50	50	ENSMUST00000182656.8	ENSMUSG00000090386.11	Mir99ahg	chr16	lncRNA	Mir99a and Mirlet7c-1 host gene (non-protein coding)
chr16	77352855	77488123	+	77352855	77393787	3pMXE	0.33	50	50	ENSMUST00000182656.8	ENSMUSG00000090386.11	Mir99ahg	chr16	lncRNA	Mir99a and Mirlet7c-1 host gene (non-protein coding)
chr16	77157606;77233290	77233243;77256262	+	77157606	77256262	cassetteExon	0.5	100	100	ENSMUST00000182656.8	ENSMUSG00000090386.11	Mir99ahg	chr16	lncRNA	Mir99a and Mirlet7c-1 host gene (non-protein coding)
chr16	77157606;77233290	77233243;77298391	+	77157606;77256390	77256262;77298391	MXE	0.5	100	100	ENSMUST00000182656.8	ENSMUSG00000090386.11	Mir99ahg	chr16	lncRNA	Mir99a and Mirlet7c-1 host gene (non-protein coding)
chr16	77352855	77391510	+	77352855	77393787	A3SS	0.33	50	50	ENSMUST00000182656.8	ENSMUSG00000090386.11	Mir99ahg	chr16	lncRNA	Mir99a and Mirlet7c-1 host gene (non-protein coding)
chr16	77297533	77298391	+	77256390	77298391	A5SS	0.25	50	50	ENSMUST00000182656.8	ENSMUSG00000090386.11	Mir99ahg	chr16	lncRNA	Mir99a and Mirlet7c-1 host gene (non-protein coding)
chr16	77392150	77393787	+	77352855	77393787	A5SS	0.5	50	50	ENSMUST00000182656.8	ENSMUSG00000090386.11	Mir99ahg	chr16	lncRNA	Mir99a and Mirlet7c-1 host gene (non-protein coding)
chr16	77157606;77233290	77233243;77298391	+	77157606	77298391	cassetteExon	0.5	100	100	ENSMUST00000182398.8	ENSMUSG00000090386.11	Mir99ahg	chr16	lncRNA	Mir99a and Mirlet7c-1 host gene (non-protein coding)
chr16	77297533	77298391	+	77157606	77298391	A5SS	0.25	50	50	ENSMUST00000182398.8	ENSMUSG00000090386.11	Mir99ahg	chr16	lncRNA	Mir99a and Mirlet7c-1 host gene (non-protein coding)
chr16	77393847	77476865	+	77393847;77467448	77467241;77476865	ES	0.33	50	50	ENSMUST00000183099.8	ENSMUSG00000090386.11	Mir99ahg	chr16	lncRNA	Mir99a and Mirlet7c-1 host gene (non-protein coding)
chr16	77467350	77476865	+	77467448	77476865	A5SS	0.33	50	50	ENSMUST00000183099.8	ENSMUSG00000090386.11	Mir99ahg	chr16	lncRNA	Mir99a and Mirlet7c-1 host gene (non-protein coding)
chr16	77352855	77488123	+	77352855	77391510	3pMXE	0.33	50	50	ENSMUST00000182601.8	ENSMUSG00000090386.11	Mir99ahg	chr16	lncRNA	Mir99a and Mirlet7c-1 host gene (non-protein coding)
chr16	77233290;77256390	77256262;77298391	+	77233290	77298391	cassetteExon	0.5	100	100	ENSMUST00000182601.8	ENSMUSG00000090386.11	Mir99ahg	chr16	lncRNA	Mir99a and Mirlet7c-1 host gene (non-protein coding)
chr16	77297533	77298391	+	77233290	77298391	A5SS	0.25	50	50	ENSMUST00000182601.8	ENSMUSG00000090386.11	Mir99ahg	chr16	lncRNA	Mir99a and Mirlet7c-1 host gene (non-protein coding)
chr16	77391315	77391510	+	77352855	77391510	A5SS	0.5	50	50	ENSMUST00000182601.8	ENSMUSG00000090386.11	Mir99ahg	chr16	lncRNA	Mir99a and Mirlet7c-1 host gene (non-protein coding)
chr16	77393847;77467350	77467241;77476865	+	77393847	77476865	cassetteExon	0.5	100	100	ENSMUST00000182820.8	ENSMUSG00000090386.11	Mir99ahg	chr16	lncRNA	Mir99a and Mirlet7c-1 host gene (non-protein coding)
chr16	77352855	77393787	+	77352855;77392150	77391510;77393787	ES	0.5	50	50	ENSMUST00000068704.12	ENSMUSG00000090386.11	Mir99ahg	chr16	lncRNA	Mir99a and Mirlet7c-1 host gene (non-protein coding)
chr16	77476911	77488123	+	77352855	77488123	A5SS	0.5	50	50	ENSMUST00000183327.2	ENSMUSG00000090386.11	Mir99ahg	chr16	lncRNA	Mir99a and Mirlet7c-1 host gene (non-protein coding)
chr16	77393847	77467241	+	77393847	77528955	A3SS	0.33	50	50	ENSMUST00000231957.2	ENSMUSG00000090386.11	Mir99ahg	chr16	lncRNA	Mir99a and Mirlet7c-1 host gene (non-protein coding)
chr16	77393847	77476865	+	77393847	77528955	A3SS	0.33	50	50	ENSMUST00000231957.2	ENSMUSG00000090386.11	Mir99ahg	chr16	lncRNA	Mir99a and Mirlet7c-1 host gene (non-protein coding)
chr16	77393847	77476865	+	77467350	77476865	5pMXE	0.33	50	50	ENSMUST00000183166.8	ENSMUSG00000090386.11	Mir99ahg	chr16	lncRNA	Mir99a and Mirlet7c-1 host gene (non-protein coding)
chr16	78048776	78052248	-	78048776	78050325	5pMXE	0.33	50	50	ENSMUST00000211335.2	ENSMUSG00000109841.3	E330011O21Rik	chr16	lncRNA	RIKEN cDNA E330011O21 gene
chr16	78048776	78050501	-	78048776	78050325	A5SS	0.33	50	50	ENSMUST00000211335.2	ENSMUSG00000109841.3	E330011O21Rik	chr16	lncRNA	RIKEN cDNA E330011O21 gene
chr16	78048776	78052248	-	78048776;78050355	78050325;78052248	ES	0.2	50	50	ENSMUST00000211605.2	ENSMUSG00000109841.3	E330011O21Rik	chr16	lncRNA	RIKEN cDNA E330011O21 gene
chr16	78052342	78071849	-	78052342	78062753	5pMXE	0.25	50	50	ENSMUST00000211605.2	ENSMUSG00000109841.3	E330011O21Rik	chr16	lncRNA	RIKEN cDNA E330011O21 gene
chr16	78052342	78091773	-	78052342	78062753	5pMXE	0.25	50	50	ENSMUST00000211605.2	ENSMUSG00000109841.3	E330011O21Rik	chr16	lncRNA	RIKEN cDNA E330011O21 gene
chr16	78052342	78099072	-	78052342	78062753	5pMXE	0.25	50	50	ENSMUST00000211605.2	ENSMUSG00000109841.3	E330011O21Rik	chr16	lncRNA	RIKEN cDNA E330011O21 gene
chr16	78048776;78050606	78050501;78052248	-	78048776;78050355	78050325;78052248	MXE	0.5	100	100	ENSMUST00000211605.2	ENSMUSG00000109841.3	E330011O21Rik	chr16	lncRNA	RIKEN cDNA E330011O21 gene
chr16	78050355;78050606	78050501;78052248	-	78050355	78052248	cassetteExon	0.5	100	100	ENSMUST00000211605.2	ENSMUSG00000109841.3	E330011O21Rik	chr16	lncRNA	RIKEN cDNA E330011O21 gene
chr16	78048776;78050659	78050501;78052248	-	78048776;78050355	78050325;78052248	MXE	0.5	100	100	ENSMUST00000211605.2	ENSMUSG00000109841.3	E330011O21Rik	chr16	lncRNA	RIKEN cDNA E330011O21 gene
chr16	78050355;78050659	78050501;78052248	-	78050355	78052248	cassetteExon	0.5	100	100	ENSMUST00000211605.2	ENSMUSG00000109841.3	E330011O21Rik	chr16	lncRNA	RIKEN cDNA E330011O21 gene
chr16	78048776	78050501	-	78048776;78050355	78050325;78050501	ES	0.33	50	50	ENSMUST00000211650.2	ENSMUSG00000109841.3	E330011O21Rik	chr16	lncRNA	RIKEN cDNA E330011O21 gene
chr16	78050384	78050501	-	78050355	78050501	A3SS	0.33	50	50	ENSMUST00000211650.2	ENSMUSG00000109841.3	E330011O21Rik	chr16	lncRNA	RIKEN cDNA E330011O21 gene
chr16	78050606	78052248	-	78050659	78052248	A3SS	0.2	50	50	ENSMUST00000211650.2	ENSMUSG00000109841.3	E330011O21Rik	chr16	lncRNA	RIKEN cDNA E330011O21 gene
chr16	78048776	78052248	-	78048776;78050659	78050501;78052248	ES	0.2	50	50	ENSMUST00000210839.2	ENSMUSG00000109841.3	E330011O21Rik	chr16	lncRNA	RIKEN cDNA E330011O21 gene
chr16	78052342	78091773	-	78052342	78071849	5pMXE	0.25	50	50	ENSMUST00000210839.2	ENSMUSG00000109841.3	E330011O21Rik	chr16	lncRNA	RIKEN cDNA E330011O21 gene
chr16	78052342	78099072	-	78052342	78071849	5pMXE	0.25	50	50	ENSMUST00000210839.2	ENSMUSG00000109841.3	E330011O21Rik	chr16	lncRNA	RIKEN cDNA E330011O21 gene
chr16	78048776;78050384	78050325;78050501	-	78048776	78050501	cassetteExon	0.5	100	100	ENSMUST00000210839.2	ENSMUSG00000109841.3	E330011O21Rik	chr16	lncRNA	RIKEN cDNA E330011O21 gene
chr16	78048456	78052248	-	78050659	78052248	A3SS&ES	0.2	50	50	ENSMUST00000210839.2	ENSMUSG00000109841.3	E330011O21Rik	chr16	lncRNA	RIKEN cDNA E330011O21 gene
chr16	78050355	78052248	-	78050606	78052248	A3SS&ES	0.2	50	50	ENSMUST00000209498.2	ENSMUSG00000109841.3	E330011O21Rik	chr16	lncRNA	RIKEN cDNA E330011O21 gene
chr16	78048456;78048776	78048661;78052248	-	78048456	78052248	cassetteExon	0.5	100	100	ENSMUST00000209468.2	ENSMUSG00000109841.3	E330011O21Rik	chr16	lncRNA	RIKEN cDNA E330011O21 gene
chr16	78050355	78052248	-	78048456	78052248	A3SS	0.2	50	50	ENSMUST00000209468.2	ENSMUSG00000109841.3	E330011O21Rik	chr16	lncRNA	RIKEN cDNA E330011O21 gene
chr16	78050606	78052248	-	78048456	78052248	A3SS	0.2	50	50	ENSMUST00000209468.2	ENSMUSG00000109841.3	E330011O21Rik	chr16	lncRNA	RIKEN cDNA E330011O21 gene
chr16	78052342	78091773	-	78052342	78099072	A5SS	0.25	50	50	ENSMUST00000209468.2	ENSMUSG00000109841.3	E330011O21Rik	chr16	lncRNA	RIKEN cDNA E330011O21 gene
chr16	78048776;78050606	78050325;78052248	-	78048776	78052248	cassetteExon	0.5	100	100	ENSMUST00000231747.2	ENSMUSG00000109841.3	E330011O21Rik	chr16	lncRNA	RIKEN cDNA E330011O21 gene
chr16	78048776;78050606	78050501;78052248	-	78048776	78052248	cassetteExon	0.5	100	100	ENSMUST00000231747.2	ENSMUSG00000109841.3	E330011O21Rik	chr16	lncRNA	RIKEN cDNA E330011O21 gene
chr16	78048776;78050659	78050325;78052248	-	78048776	78052248	cassetteExon	0.5	100	100	ENSMUST00000231747.2	ENSMUSG00000109841.3	E330011O21Rik	chr16	lncRNA	RIKEN cDNA E330011O21 gene
chr16	78048456	78052248	-	78048776	78052248	A3SS	0.2	50	50	ENSMUST00000231747.2	ENSMUSG00000109841.3	E330011O21Rik	chr16	lncRNA	RIKEN cDNA E330011O21 gene
chr16	78050355	78052248	-	78050659	78052248	A3SS&ES	0.25	50	50	ENSMUST00000210555.2	ENSMUSG00000109841.3	E330011O21Rik	chr16	lncRNA	RIKEN cDNA E330011O21 gene
chr16	78126046;78129890	78129814;78130250	+	78126046	78130250	cassetteExon	0.5	100	100	ENSMUST00000023572.15	ENSMUSG00000022865.15	Cxadr	chr16	protein_coding	coxsackie virus and adenovirus receptor
chr16	78157426	78161690	-	78132099	78161690	A3SS	0.5	50	50	ENSMUST00000231353.2	ENSMUSG00000022863.16	Btg3	chr16	protein_coding	BTG anti-proliferation factor 3
chr16	78170311	78174056	-	78170311	78173489	5pMXE	0.5	50	50	ENSMUST00000023570.14	ENSMUSG00000022863.16	Btg3	chr16	protein_coding	BTG anti-proliferation factor 3
chr16	78342172	78344464	-	78342172;78343456	78343394;78344464	ES	0.5	50	50	ENSMUST00000231973.2	ENSMUSG00000022864.15	D16Ertd472e	chr16	protein_coding	DNA segment, Chr 16, ERATO Doi 472, expressed
chr16	78344979	78355752	-	78344979	78372809	A5SS	0.5	50	50	ENSMUST00000231973.2	ENSMUSG00000022864.15	D16Ertd472e	chr16	protein_coding	DNA segment, Chr 16, ERATO Doi 472, expressed
chr16	78372942	78373079	-	78372942	78373496	A5SS	0.16	50	50	ENSMUST00000231973.2	ENSMUSG00000022864.15	D16Ertd472e	chr16	protein_coding	DNA segment, Chr 16, ERATO Doi 472, expressed
chr16	78372942	78373279	-	78372942	78373496	A5SS	0.16	50	50	ENSMUST00000231973.2	ENSMUSG00000022864.15	D16Ertd472e	chr16	protein_coding	DNA segment, Chr 16, ERATO Doi 472, expressed
chr16	78372942	78373312	-	78372942	78373496	A5SS	0.16	50	50	ENSMUST00000231973.2	ENSMUSG00000022864.15	D16Ertd472e	chr16	protein_coding	DNA segment, Chr 16, ERATO Doi 472, expressed
chr16	78372942	78373347	-	78372942	78373496	A5SS	0.16	50	50	ENSMUST00000231973.2	ENSMUSG00000022864.15	D16Ertd472e	chr16	protein_coding	DNA segment, Chr 16, ERATO Doi 472, expressed
chr16	78372942	78373371	-	78372942	78373496	A5SS	0.16	50	50	ENSMUST00000231973.2	ENSMUSG00000022864.15	D16Ertd472e	chr16	protein_coding	DNA segment, Chr 16, ERATO Doi 472, expressed
chr16	78372942	78373279	-	78372942	78373079	A5SS	0.16	50	50	ENSMUST00000232052.2	ENSMUSG00000022864.15	D16Ertd472e	chr16	protein_coding	DNA segment, Chr 16, ERATO Doi 472, expressed
chr16	78372942	78373312	-	78372942	78373079	A5SS	0.16	50	50	ENSMUST00000232052.2	ENSMUSG00000022864.15	D16Ertd472e	chr16	protein_coding	DNA segment, Chr 16, ERATO Doi 472, expressed
chr16	78372942	78373347	-	78372942	78373079	A5SS	0.16	50	50	ENSMUST00000232052.2	ENSMUSG00000022864.15	D16Ertd472e	chr16	protein_coding	DNA segment, Chr 16, ERATO Doi 472, expressed
chr16	78372942	78373371	-	78372942	78373079	A5SS	0.16	50	50	ENSMUST00000232052.2	ENSMUSG00000022864.15	D16Ertd472e	chr16	protein_coding	DNA segment, Chr 16, ERATO Doi 472, expressed
chr16	78372942	78373279	-	78372942	78373347	A5SS	0.16	50	50	ENSMUST00000114220.9	ENSMUSG00000022864.15	D16Ertd472e	chr16	protein_coding	DNA segment, Chr 16, ERATO Doi 472, expressed
chr16	78372942	78373312	-	78372942	78373347	A5SS	0.16	50	50	ENSMUST00000114220.9	ENSMUSG00000022864.15	D16Ertd472e	chr16	protein_coding	DNA segment, Chr 16, ERATO Doi 472, expressed
chr16	78372942	78373371	-	78372942	78373347	A5SS	0.16	50	50	ENSMUST00000114220.9	ENSMUSG00000022864.15	D16Ertd472e	chr16	protein_coding	DNA segment, Chr 16, ERATO Doi 472, expressed
chr16	78372942	78373312	-	78372942	78373279	A5SS	0.16	50	50	ENSMUST00000114219.8	ENSMUSG00000022864.15	D16Ertd472e	chr16	protein_coding	DNA segment, Chr 16, ERATO Doi 472, expressed
chr16	78372942	78373371	-	78372942	78373279	A5SS	0.16	50	50	ENSMUST00000114219.8	ENSMUSG00000022864.15	D16Ertd472e	chr16	protein_coding	DNA segment, Chr 16, ERATO Doi 472, expressed
chr16	78372942	78373371	-	78372942	78373312	A5SS	0.16	50	50	ENSMUST00000114218.2	ENSMUSG00000022864.15	D16Ertd472e	chr16	protein_coding	DNA segment, Chr 16, ERATO Doi 472, expressed
chr16	78738692	78741474	+	78738692	78741459	A3SS	0.5	50	50	ENSMUST00000114216.2	ENSMUSG00000022860.16	Chodl	chr16	protein_coding	chondrolectin
chr16	78743651	78747245	+	78743651	78745900	3pMXE	0.5	50	50	ENSMUST00000069148.13	ENSMUSG00000022860.16	Chodl	chr16	protein_coding	chondrolectin
chr16	78859156	78868289	-	78859156;78868184	78868140;78868289	ES	0.5	50	50	ENSMUST00000023566.11	ENSMUSG00000022857.14	Tmprss15	chr16	protein_coding	transmembrane protease, serine 15
chr16	81386699	81412591	+	81386699	81392095	3pMXE	0.5	50	50	ENSMUST00000037785.14	ENSMUSG00000022762.19	Ncam2	chr16	protein_coding	neural cell adhesion molecule 2
chr16	81262592	81280189	+	81262592	81287132	A3SS	0.5	50	50	ENSMUST00000037785.14	ENSMUSG00000022762.19	Ncam2	chr16	protein_coding	neural cell adhesion molecule 2
chr16	84509981	84510941	+	84500223	84510941	A5SS	0.5	50	50	ENSMUST00000185662.7	ENSMUSG00000097418.8	Mir155hg	chr16	lncRNA	Mir155 host gene (non-protein coding)
chr16	84613261	84615646	+	84613261	84615648	A3SS	0.5	50	50	ENSMUST00000114195.8	ENSMUSG00000053062.17	Jam2	chr16	protein_coding	junction adhesion molecule 2
chr16	84590618	84598458	+	84571441	84598458	A5SS	0.5	50	50	ENSMUST00000114195.8	ENSMUSG00000053062.17	Jam2	chr16	protein_coding	junction adhesion molecule 2
chr16	84628395	84631697	-	84628395	84630882	5pMXE	0.16	50	50	ENSMUST00000114193.8	ENSMUSG00000022890.14	Atp5j	chr16	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
chr16	84628395	84631780	-	84628395	84630882	5pMXE	0.16	50	50	ENSMUST00000114193.8	ENSMUSG00000022890.14	Atp5j	chr16	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
chr16	84628395	84631830	-	84628395	84630882	5pMXE	0.16	50	50	ENSMUST00000114193.8	ENSMUSG00000022890.14	Atp5j	chr16	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
chr16	84628395	84632309	-	84628395	84630882	5pMXE	0.16	50	50	ENSMUST00000114193.8	ENSMUSG00000022890.14	Atp5j	chr16	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
chr16	84626681	84628217	-	84625437	84628217	A3SS	0.5	50	50	ENSMUST00000114193.8	ENSMUSG00000022890.14	Atp5j	chr16	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
chr16	84628395	84630708	-	84628395	84630882	A5SS	0.16	50	50	ENSMUST00000114193.8	ENSMUSG00000022890.14	Atp5j	chr16	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
chr16	84628395	84631697	-	84628395;84630762	84630708;84631697	ES	0.5	50	50	ENSMUST00000114191.8	ENSMUSG00000022890.14	Atp5j	chr16	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
chr16	84628395	84631780	-	84628395	84630708	A5SS&ES	0.16	50	50	ENSMUST00000114191.8	ENSMUSG00000022890.14	Atp5j	chr16	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
chr16	84628395	84631830	-	84628395	84630708	A5SS&ES	0.16	50	50	ENSMUST00000114191.8	ENSMUSG00000022890.14	Atp5j	chr16	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
chr16	84628395	84632309	-	84628395;84631871	84631697;84632309	ES	0.5	50	50	ENSMUST00000023608.14	ENSMUSG00000022890.14	Atp5j	chr16	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
chr16	84628395	84631780	-	84628395	84631697	A5SS	0.16	50	50	ENSMUST00000023608.14	ENSMUSG00000022890.14	Atp5j	chr16	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
chr16	84628395	84631830	-	84628395	84631697	A5SS	0.16	50	50	ENSMUST00000023608.14	ENSMUSG00000022890.14	Atp5j	chr16	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
chr16	84628395;84631871	84631780;84632309	-	84628395	84632309	cassetteExon	0.5	100	100	ENSMUST00000138279.2	ENSMUSG00000022890.14	Atp5j	chr16	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
chr16	84628395;84631871	84631830;84632309	-	84628395	84632309	cassetteExon	0.5	100	100	ENSMUST00000138279.2	ENSMUSG00000022890.14	Atp5j	chr16	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
chr16	84628395	84630708	-	84628395	84632309	A5SS	0.16	50	50	ENSMUST00000138279.2	ENSMUSG00000022890.14	Atp5j	chr16	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
chr16	84628395	84631697	-	84628395	84630708	5pMXE	0.16	50	50	ENSMUST00000146225.8	ENSMUSG00000022890.14	Atp5j	chr16	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
chr16	84628395	84632309	-	84628395	84631697	5pMXE	0.16	50	50	ENSMUST00000127651.2	ENSMUSG00000022890.14	Atp5j	chr16	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
chr16	84628395	84632309	-	84628395	84631780	5pMXE	0.16	50	50	ENSMUST00000140036.2	ENSMUSG00000022890.14	Atp5j	chr16	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
chr16	84628395	84631830	-	84628395	84631780	A5SS	0.16	50	50	ENSMUST00000140036.2	ENSMUSG00000022890.14	Atp5j	chr16	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
chr16	84628395	84632309	-	84628395	84631830	5pMXE	0.16	50	50	ENSMUST00000155956.2	ENSMUSG00000022890.14	Atp5j	chr16	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
chr16	84628395	84631697	-	84630762	84631697	3pMXE	0.5	50	50	ENSMUST00000150502.2	ENSMUSG00000022890.14	Atp5j	chr16	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
chr16	84628395	84632309	-	84631871	84632309	3pMXE	0.5	50	50	ENSMUST00000148787.2	ENSMUSG00000022890.14	Atp5j	chr16	protein_coding	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
chr16	84649542;84651910	84651840;84653350	+	84649542	84653350	cassetteExon	0.5	100	100	ENSMUST00000114184.8	ENSMUSG00000008976.17	Gabpa	chr16	protein_coding	GA repeat binding protein, alpha
chr16	84632431	84635969	+	84631911	84635969	A5SS	0.5	50	50	ENSMUST00000114184.8	ENSMUSG00000008976.17	Gabpa	chr16	protein_coding	GA repeat binding protein, alpha
chr16	84762658	84774952	-	84762658;84768349	84768296;84774952	ES	0.5	50	50	ENSMUST00000227723.2	ENSMUSG00000022892.12	App	chr16	protein_coding	amyloid beta (A4) precursor protein
chr16	84827253	84840464	-	84827253;84837195	84837139;84840464	ES	0.5	50	50	ENSMUST00000227723.2	ENSMUSG00000022892.12	App	chr16	protein_coding	amyloid beta (A4) precursor protein
chr16	84790195	84810515	-	84775173	84810515	A3SS	0.25	50	50	ENSMUST00000227723.2	ENSMUSG00000022892.12	App	chr16	protein_coding	amyloid beta (A4) precursor protein
chr16	84791955	84810515	-	84775173	84810515	A3SS	0.25	50	50	ENSMUST00000227723.2	ENSMUSG00000022892.12	App	chr16	protein_coding	amyloid beta (A4) precursor protein
chr16	84768349	84774733	-	84768349	84774952	A5SS	0.5	50	50	ENSMUST00000227723.2	ENSMUSG00000022892.12	App	chr16	protein_coding	amyloid beta (A4) precursor protein
chr16	84752320	84810515	-	84752320	84759610	5pMXE	0.5	50	50	ENSMUST00000227654.2	ENSMUSG00000022892.12	App	chr16	protein_coding	amyloid beta (A4) precursor protein
chr16	84775173	84810515	-	84752320	84810515	A3SS	0.25	50	50	ENSMUST00000227737.2	ENSMUSG00000022892.12	App	chr16	protein_coding	amyloid beta (A4) precursor protein
chr16	84790195	84810515	-	84752320	84810515	A3SS	0.25	50	50	ENSMUST00000227737.2	ENSMUSG00000022892.12	App	chr16	protein_coding	amyloid beta (A4) precursor protein
chr16	84791955	84810515	-	84752320	84810515	A3SS	0.25	50	50	ENSMUST00000227737.2	ENSMUSG00000022892.12	App	chr16	protein_coding	amyloid beta (A4) precursor protein
chr16	84827253;84840631	84840464;84853212	-	84827253	84853212	cassetteExon	0.5	100	100	ENSMUST00000005406.12	ENSMUSG00000022892.12	App	chr16	protein_coding	amyloid beta (A4) precursor protein
chr16	84827253	84837139	-	84827253	84853212	A5SS	0.33	50	50	ENSMUST00000005406.12	ENSMUSG00000022892.12	App	chr16	protein_coding	amyloid beta (A4) precursor protein
chr16	84791955	84810515	-	84790195	84810515	A3SS	0.25	50	50	ENSMUST00000227753.2	ENSMUSG00000022892.12	App	chr16	protein_coding	amyloid beta (A4) precursor protein
chr16	85262579	85341709	-	85219229	85341709	A3SS	0.5	50	50	ENSMUST00000175700.8	ENSMUSG00000041134.16	Cyyr1	chr16	protein_coding	cysteine and tyrosine-rich protein 1
chr16	85347597	85347684	-	85347597	85350088	A5SS	0.5	50	50	ENSMUST00000163020.2	ENSMUSG00000041134.16	Cyyr1	chr16	protein_coding	cysteine and tyrosine-rich protein 1
chr16	85597324	85598131	-	85597324	85598866	A5SS	0.5	50	50	ENSMUST00000023610.15	ENSMUSG00000022893.15	Adamts1	chr16	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1
chr16	86600960	86602019	-	86600960	86603349	A5SS	0.5	50	50	ENSMUST00000231875.2	ENSMUSG00000116993.2	Gm32461	chr16	lncRNA	predicted gene, 32461
chr16	86598325	86600861	-	86567285	86600861	A3SS	0.5	50	50	ENSMUST00000232333.2	ENSMUSG00000116993.2	Gm32461	chr16	lncRNA	predicted gene, 32461
chr16	86567285	86571766	-	86567285	86600861	A5SS	0.5	50	50	ENSMUST00000232333.2	ENSMUSG00000116993.2	Gm32461	chr16	lncRNA	predicted gene, 32461
chr16	86624982;86632959	86632865;86673782	+	86624982;86650672	86650484;86673782	MXE	0.5	100	100	ENSMUST00000231555.2	ENSMUSG00000116810.2	Gm32624	chr16	lncRNA	predicted gene, 32624
chr16	86798629	86799786	-	86759669	86799786	A3SS	0.5	50	50	ENSMUST00000231918.2	ENSMUSG00000116555.2	Gm38477	chr16	lncRNA	predicted gene, 38477
chr16	86801387	86820264	-	86801387	86827478	A5SS	0.5	50	50	ENSMUST00000231918.2	ENSMUSG00000116555.2	Gm38477	chr16	lncRNA	predicted gene, 38477
chr16	87159491	87164353	+	87159491;87163168	87163027;87164353	ES	0.5	50	50	ENSMUST00000054442.11	ENSMUSG00000044442.12	N6amt1	chr16	protein_coding	N-6 adenine-specific DNA methyltransferase 1 (putative)
chr16	87159491	87164353	+	87159491	87163027	A3SS	0.5	50	50	ENSMUST00000118115.2	ENSMUSG00000044442.12	N6amt1	chr16	protein_coding	N-6 adenine-specific DNA methyltransferase 1 (putative)
chr16	87210176	87212042	-	87209449	87212042	A3SS	0.5	50	50	ENSMUST00000039449.9	ENSMUSG00000052299.10	Ltn1	chr16	protein_coding	listerin E3 ubiquitin protein ligase 1
chr16	87233823;87234402	87233952;87237325	-	87233823	87237325	cassetteExon	0.5	100	100	ENSMUST00000152430.2	ENSMUSG00000041079.13	Rwdd2b	chr16	protein_coding	RWD domain containing 2B
chr16	87255630	87261623	+	87255630;87259028	87258853;87261623	ES	0.5	50	50	ENSMUST00000026710.12	ENSMUSG00000025616.15	Usp16	chr16	protein_coding	ubiquitin specific peptidase 16
chr16	87269056	87271470	+	87269056;87270073	87269995;87271470	ES	0.5	50	50	ENSMUST00000026710.12	ENSMUSG00000025616.15	Usp16	chr16	protein_coding	ubiquitin specific peptidase 16
chr16	87278688	87279995	+	87278688;87279904	87279748;87279995	ES	0.5	50	50	ENSMUST00000026710.12	ENSMUSG00000025616.15	Usp16	chr16	protein_coding	ubiquitin specific peptidase 16
chr16	87251990;87252896	87252848;87255529	+	87251990	87255529	cassetteExon	0.5	100	100	ENSMUST00000026710.12	ENSMUSG00000025616.15	Usp16	chr16	protein_coding	ubiquitin specific peptidase 16
chr16	87263244	87266566	+	87263244	87266563	A3SS	0.5	50	50	ENSMUST00000026710.12	ENSMUSG00000025616.15	Usp16	chr16	protein_coding	ubiquitin specific peptidase 16
chr16	87255630	87261623	+	87255630	87258853	3pMXE	0.5	50	50	ENSMUST00000131356.8	ENSMUSG00000025616.15	Usp16	chr16	protein_coding	ubiquitin specific peptidase 16
chr16	87269056	87271470	+	87270073	87271470	5pMXE	0.5	50	50	ENSMUST00000146386.2	ENSMUSG00000025616.15	Usp16	chr16	protein_coding	ubiquitin specific peptidase 16
chr16	87278688	87279995	+	87279904	87279995	5pMXE	0.5	50	50	ENSMUST00000177275.2	ENSMUSG00000025616.15	Usp16	chr16	protein_coding	ubiquitin specific peptidase 16
chr16	87288339	87291225	-	87288339;87290674	87290595;87291225	ES	0.5	50	50	ENSMUST00000026704.14	ENSMUSG00000025613.14	Cct8	chr16	protein_coding	chaperonin containing Tcp1, subunit 8 (theta)
chr16	87290674	87292617	-	87290674;87291315	87291225;87292617	ES	0.5	50	50	ENSMUST00000026704.14	ENSMUSG00000025613.14	Cct8	chr16	protein_coding	chaperonin containing Tcp1, subunit 8 (theta)
chr16	87282611	87282722	-	87282632	87282722	A3SS	0.5	50	50	ENSMUST00000026704.14	ENSMUSG00000025613.14	Cct8	chr16	protein_coding	chaperonin containing Tcp1, subunit 8 (theta)
chr16	87285807	87287209	-	87285832	87287209	A3SS	0.5	50	50	ENSMUST00000026704.14	ENSMUSG00000025613.14	Cct8	chr16	protein_coding	chaperonin containing Tcp1, subunit 8 (theta)
chr16	87287270	87288186	-	87287270	87287373	A5SS&ES	0.5	50	50	ENSMUST00000026704.14	ENSMUSG00000025613.14	Cct8	chr16	protein_coding	chaperonin containing Tcp1, subunit 8 (theta)
chr16	87291315	87292467	-	87291315	87292617	A5SS	0.5	50	50	ENSMUST00000026704.14	ENSMUSG00000025613.14	Cct8	chr16	protein_coding	chaperonin containing Tcp1, subunit 8 (theta)
chr16	87288339;87290674	87290595;87292617	-	87288339;87291315	87291225;87292617	MXE	0.5	100	100	ENSMUST00000177376.8	ENSMUSG00000025613.14	Cct8	chr16	protein_coding	chaperonin containing Tcp1, subunit 8 (theta)
chr16	87293197	87298751	+	87293054	87298751	A5SS	0.5	50	50	ENSMUST00000176296.2	ENSMUSG00000093606.2	B130034C11Rik	chr16	lncRNA	RIKEN cDNA B130034C11 gene
chr16	87495944	87515695	+	87495944;87512512	87512219;87515695	ES	0.5	50	50	ENSMUST00000026703.6	ENSMUSG00000025612.6	Bach1	chr16	protein_coding	BTB and CNC homology 1, basic leucine zipper transcription factor 1
chr16	87584732	87626165	+	87584732	87589410	3pMXE	0.5	50	50	ENSMUST00000069809.6	ENSMUSG00000055972.6	2810407A14Rik	chr16	lncRNA	RIKEN cDNA 2810407A14 gene
chr16	87747029	87754378	-	87747029;87752221	87752177;87754378	ES	0.5	50	50	ENSMUST00000228188.2	ENSMUSG00000022935.17	Grik1	chr16	protein_coding	glutamate receptor, ionotropic, kainate 1
chr16	87693239;87693783	87693697;87711042	-	87693239	87711042	cassetteExon	0.5	100	100	ENSMUST00000228188.2	ENSMUSG00000022935.17	Grik1	chr16	protein_coding	glutamate receptor, ionotropic, kainate 1
chr16	87693677	87711042	-	87693239	87711042	A3SS	0.25	50	50	ENSMUST00000228188.2	ENSMUSG00000022935.17	Grik1	chr16	protein_coding	glutamate receptor, ionotropic, kainate 1
chr16	87709757	87711042	-	87693239	87711042	A3SS	0.25	50	50	ENSMUST00000228188.2	ENSMUSG00000022935.17	Grik1	chr16	protein_coding	glutamate receptor, ionotropic, kainate 1
chr16	87743323	87743433	-	87737544	87743433	A3SS	0.5	50	50	ENSMUST00000228188.2	ENSMUSG00000022935.17	Grik1	chr16	protein_coding	glutamate receptor, ionotropic, kainate 1
chr16	87693677	87711042	-	87693783	87711042	A3SS&ES	0.25	50	50	ENSMUST00000072256.13	ENSMUSG00000022935.17	Grik1	chr16	protein_coding	glutamate receptor, ionotropic, kainate 1
chr16	87709757	87711042	-	87693783	87711042	A3SS	0.25	50	50	ENSMUST00000072256.13	ENSMUSG00000022935.17	Grik1	chr16	protein_coding	glutamate receptor, ionotropic, kainate 1
chr16	87709757	87711042	-	87693677	87711042	A3SS	0.25	50	50	ENSMUST00000228034.2	ENSMUSG00000022935.17	Grik1	chr16	protein_coding	glutamate receptor, ionotropic, kainate 1
chr16	89652903	89655487	-	89652903	89654680	5pMXE	0.5	50	50	ENSMUST00000114122.8	ENSMUSG00000002489.17	Tiam1	chr16	protein_coding	T cell lymphoma invasion and metastasis 1
chr16	89584053	89589890	-	89586479	89589890	A3SS	0.5	50	50	ENSMUST00000114122.8	ENSMUSG00000002489.17	Tiam1	chr16	protein_coding	T cell lymphoma invasion and metastasis 1
chr16	89591653	89592137	-	89591653	89594920	A5SS	0.5	50	50	ENSMUST00000114122.8	ENSMUSG00000002489.17	Tiam1	chr16	protein_coding	T cell lymphoma invasion and metastasis 1
chr16	89610015	89614849	-	89610015	89618766	A5SS	0.5	50	50	ENSMUST00000114122.8	ENSMUSG00000002489.17	Tiam1	chr16	protein_coding	T cell lymphoma invasion and metastasis 1
chr16	89695466	89752824	-	89695466;89705603	89705435;89752824	ES	0.5	50	50	ENSMUST00000163370.8	ENSMUSG00000002489.17	Tiam1	chr16	protein_coding	T cell lymphoma invasion and metastasis 1
chr16	89752995	89776871	-	89752995	89771472	5pMXE	0.2	50	50	ENSMUST00000163370.8	ENSMUSG00000002489.17	Tiam1	chr16	protein_coding	T cell lymphoma invasion and metastasis 1
chr16	89752995	89863409	-	89752995	89771472	5pMXE	0.2	50	50	ENSMUST00000163370.8	ENSMUSG00000002489.17	Tiam1	chr16	protein_coding	T cell lymphoma invasion and metastasis 1
chr16	89705603	89715698	-	89705603	89752824	A5SS	0.5	50	50	ENSMUST00000163370.8	ENSMUSG00000002489.17	Tiam1	chr16	protein_coding	T cell lymphoma invasion and metastasis 1
chr16	89752995	89757565	-	89752995	89771472	A5SS	0.2	50	50	ENSMUST00000163370.8	ENSMUSG00000002489.17	Tiam1	chr16	protein_coding	T cell lymphoma invasion and metastasis 1
chr16	89752995	89770682	-	89752995	89771472	A5SS	0.2	50	50	ENSMUST00000163370.8	ENSMUSG00000002489.17	Tiam1	chr16	protein_coding	T cell lymphoma invasion and metastasis 1
chr16	89752995	89757565	-	89752995	89863409	A5SS	0.2	50	50	ENSMUST00000114124.9	ENSMUSG00000002489.17	Tiam1	chr16	protein_coding	T cell lymphoma invasion and metastasis 1
chr16	89752995	89770682	-	89752995	89863409	A5SS	0.2	50	50	ENSMUST00000114124.9	ENSMUSG00000002489.17	Tiam1	chr16	protein_coding	T cell lymphoma invasion and metastasis 1
chr16	89752995	89776871	-	89752995	89863409	A5SS	0.2	50	50	ENSMUST00000114124.9	ENSMUSG00000002489.17	Tiam1	chr16	protein_coding	T cell lymphoma invasion and metastasis 1
chr16	89752995	89770682	-	89752995	89757565	5pMXE	0.2	50	50	ENSMUST00000002588.11	ENSMUSG00000002489.17	Tiam1	chr16	protein_coding	T cell lymphoma invasion and metastasis 1
chr16	89752995	89776871	-	89752995	89757565	5pMXE	0.2	50	50	ENSMUST00000002588.11	ENSMUSG00000002489.17	Tiam1	chr16	protein_coding	T cell lymphoma invasion and metastasis 1
chr16	89695466	89752824	-	89705603	89752824	3pMXE	0.5	50	50	ENSMUST00000124433.8	ENSMUSG00000002489.17	Tiam1	chr16	protein_coding	T cell lymphoma invasion and metastasis 1
chr16	89752995	89776871	-	89752995	89770682	5pMXE	0.2	50	50	ENSMUST00000155915.2	ENSMUSG00000002489.17	Tiam1	chr16	protein_coding	T cell lymphoma invasion and metastasis 1
chr16	90039606	90039760	-	90039540	90039760	A3SS	0.5	50	50	ENSMUST00000163419.9	ENSMUSG00000022983.17	Scaf4	chr16	protein_coding	SR-related CTD-associated factor 4
chr16	90045591	90046515	-	90045591	90046527	A5SS	0.5	50	50	ENSMUST00000163419.9	ENSMUSG00000022983.17	Scaf4	chr16	protein_coding	SR-related CTD-associated factor 4
chr16	90046600	90046942	-	90046600	90046945	A5SS	0.5	50	50	ENSMUST00000163419.9	ENSMUSG00000022983.17	Scaf4	chr16	protein_coding	SR-related CTD-associated factor 4
chr16	90112901	90114843	+	90112901	90127645	A3SS	0.5	50	50	ENSMUST00000232436.2	ENSMUSG00000116600.2	Gm49707	chr16	lncRNA	predicted gene, 49707
chr16	90197505	90229402	+	90183604	90229402	A5SS	0.5	50	50	ENSMUST00000065856.8	ENSMUSG00000053414.9	Hunk	chr16	protein_coding	hormonally upregulated Neu-associated kinase
chr16	90535557	90544412	+	90535557;90543614	90543530;90544412	ES	0.5	50	50	ENSMUST00000125429.3	ENSMUSG00000039956.10	Mrap	chr16	protein_coding	melanocortin 2 receptor accessory protein
chr16	90535557	90543199	+	90535557	90543530	A3SS	0.25	50	50	ENSMUST00000125429.3	ENSMUSG00000039956.10	Mrap	chr16	protein_coding	melanocortin 2 receptor accessory protein
chr16	90535557	90544263	+	90535557	90543530	A3SS&ES	0.25	50	50	ENSMUST00000125429.3	ENSMUSG00000039956.10	Mrap	chr16	protein_coding	melanocortin 2 receptor accessory protein
chr16	90535557	90544263	+	90535557	90543199	3pMXE	0.25	50	50	ENSMUST00000133973.8	ENSMUSG00000039956.10	Mrap	chr16	protein_coding	melanocortin 2 receptor accessory protein
chr16	90535557	90544412	+	90535557	90543199	3pMXE	0.25	50	50	ENSMUST00000133973.8	ENSMUSG00000039956.10	Mrap	chr16	protein_coding	melanocortin 2 receptor accessory protein
chr16	90535557	90544412	+	90535557	90544263	A3SS	0.25	50	50	ENSMUST00000138984.8	ENSMUSG00000039956.10	Mrap	chr16	protein_coding	melanocortin 2 receptor accessory protein
chr16	90535557;90543614	90543199;90544412	+	90535557	90544412	cassetteExon	0.5	100	100	ENSMUST00000038197.3	ENSMUSG00000039956.10	Mrap	chr16	protein_coding	melanocortin 2 receptor accessory protein
chr16	90624870	90661225	+	90624870	90626092	3pMXE	0.5	50	50	ENSMUST00000138064.8	ENSMUSG00000039903.19	Eva1c	chr16	protein_coding	eva-1 homolog C (C. elegans)
chr16	90623863	90661225	+	90623863;90624870	90624711;90661225	ES	0.5	50	50	ENSMUST00000232665.2	ENSMUSG00000039903.19	Eva1c	chr16	protein_coding	eva-1 homolog C (C. elegans)
chr16	90673079	90691466	+	90673079;90687561	90687418;90691466	ES	0.5	50	50	ENSMUST00000232665.2	ENSMUSG00000039903.19	Eva1c	chr16	protein_coding	eva-1 homolog C (C. elegans)
chr16	90628320	90663143	+	90661377	90663143	A5SS&ES	0.25	50	50	ENSMUST00000232665.2	ENSMUSG00000039903.19	Eva1c	chr16	protein_coding	eva-1 homolog C (C. elegans)
chr16	90628320	90666454	+	90663339	90666454	A5SS&ES	0.5	50	50	ENSMUST00000232665.2	ENSMUSG00000039903.19	Eva1c	chr16	protein_coding	eva-1 homolog C (C. elegans)
chr16	90628320	90672927	+	90666577	90672927	A5SS&ES	0.5	50	50	ENSMUST00000232665.2	ENSMUSG00000039903.19	Eva1c	chr16	protein_coding	eva-1 homolog C (C. elegans)
chr16	90643699	90663143	+	90661377	90663143	A5SS&ES	0.25	50	50	ENSMUST00000232665.2	ENSMUSG00000039903.19	Eva1c	chr16	protein_coding	eva-1 homolog C (C. elegans)
chr16	90623863	90663143	+	90623863;90661377	90661225;90663143	ES	0.25	50	50	ENSMUST00000232274.2	ENSMUSG00000039903.19	Eva1c	chr16	protein_coding	eva-1 homolog C (C. elegans)
chr16	90623863	90624711	+	90623863	90663143	A3SS	0.33	50	50	ENSMUST00000099548.10	ENSMUSG00000039903.19	Eva1c	chr16	protein_coding	eva-1 homolog C (C. elegans)
chr16	90628320	90663143	+	90623863	90663143	A5SS	0.25	50	50	ENSMUST00000099548.10	ENSMUSG00000039903.19	Eva1c	chr16	protein_coding	eva-1 homolog C (C. elegans)
chr16	90643699	90663143	+	90623863	90663143	A5SS	0.25	50	50	ENSMUST00000099548.10	ENSMUSG00000039903.19	Eva1c	chr16	protein_coding	eva-1 homolog C (C. elegans)
chr16	90628320	90672927	+	90628320;90666577	90666454;90672927	ES	0.5	50	50	ENSMUST00000130868.8	ENSMUSG00000039903.19	Eva1c	chr16	protein_coding	eva-1 homolog C (C. elegans)
chr16	90628320;90663339	90663143;90666454	+	90628320	90666454	cassetteExon	0.5	100	100	ENSMUST00000130868.8	ENSMUSG00000039903.19	Eva1c	chr16	protein_coding	eva-1 homolog C (C. elegans)
chr16	90643699	90663143	+	90628320	90663143	A5SS	0.25	50	50	ENSMUST00000037539.15	ENSMUSG00000039903.19	Eva1c	chr16	protein_coding	eva-1 homolog C (C. elegans)
chr16	90628320	90663143	+	90628320	90672927	A3SS	0.33	50	50	ENSMUST00000231280.2	ENSMUSG00000039903.19	Eva1c	chr16	protein_coding	eva-1 homolog C (C. elegans)
chr16	90673079	90691466	+	90673079	90687418	3pMXE	0.5	50	50	ENSMUST00000154180.2	ENSMUSG00000039903.19	Eva1c	chr16	protein_coding	eva-1 homolog C (C. elegans)
chr16	90722970	90723986	-	90722970;90723328	90723233;90723986	ES	0.5	50	50	ENSMUST00000023694.11	ENSMUSG00000022972.11	Cfap298	chr16	protein_coding	cilia and flagella associate protien 298
chr16	90724396	90727882	-	90724396;90726871	90726804;90727882	ES	0.5	50	50	ENSMUST00000023694.11	ENSMUSG00000022972.11	Cfap298	chr16	protein_coding	cilia and flagella associate protien 298
chr16	90727998	90731470	-	90728049	90731470	A3SS	0.33	50	50	ENSMUST00000023694.11	ENSMUSG00000022972.11	Cfap298	chr16	protein_coding	cilia and flagella associate protien 298
chr16	90728049	90731278	-	90728049	90731470	A5SS	0.5	50	50	ENSMUST00000023694.11	ENSMUSG00000022972.11	Cfap298	chr16	protein_coding	cilia and flagella associate protien 298
chr16	90724396	90727882	-	90724396	90726804	5pMXE	0.33	50	50	ENSMUST00000129345.8	ENSMUSG00000022972.11	Cfap298	chr16	protein_coding	cilia and flagella associate protien 298
chr16	90724396	90731470	-	90724396	90726804	5pMXE	0.33	50	50	ENSMUST00000129345.8	ENSMUSG00000022972.11	Cfap298	chr16	protein_coding	cilia and flagella associate protien 298
chr16	90724396	90731470	-	90724396;90728049	90727882;90731470	ES	0.33	50	50	ENSMUST00000125519.8	ENSMUSG00000022972.11	Cfap298	chr16	protein_coding	cilia and flagella associate protien 298
chr16	90722970	90723986	-	90723328	90723986	3pMXE	0.5	50	50	ENSMUST00000231711.2	ENSMUSG00000022972.11	Cfap298	chr16	protein_coding	cilia and flagella associate protien 298
chr16	90724396;90727998	90727882;90731470	-	90724396	90731470	cassetteExon	0.5	100	100	ENSMUST00000131583.2	ENSMUSG00000022972.11	Cfap298	chr16	protein_coding	cilia and flagella associate protien 298
chr16	90743941	90746587	-	90743941;90745001	90744954;90746587	ES	0.5	50	50	ENSMUST00000121759.8	ENSMUSG00000022973.19	Synj1	chr16	protein_coding	synaptojanin 1
chr16	90766262	90770798	-	90766262;90768475	90768452;90770798	ES	0.5	50	50	ENSMUST00000121759.8	ENSMUSG00000022973.19	Synj1	chr16	protein_coding	synaptojanin 1
chr16	90735922;90737381	90737361;90741243	-	90735922	90741243	cassetteExon	0.5	100	100	ENSMUST00000121759.8	ENSMUSG00000022973.19	Synj1	chr16	protein_coding	synaptojanin 1
chr16	90735922;90737384	90737361;90741243	-	90735922	90741243	cassetteExon	0.5	100	100	ENSMUST00000121759.8	ENSMUSG00000022973.19	Synj1	chr16	protein_coding	synaptojanin 1
chr16	90770963	90773487	-	90770954	90773487	A3SS	0.5	50	50	ENSMUST00000121759.8	ENSMUSG00000022973.19	Synj1	chr16	protein_coding	synaptojanin 1
chr16	90741795	90743480	-	90741795	90743680	A5SS	0.5	50	50	ENSMUST00000121759.8	ENSMUSG00000022973.19	Synj1	chr16	protein_coding	synaptojanin 1
chr16	90807057	90807861	-	90807057	90807981	A5SS	0.5	50	50	ENSMUST00000121759.8	ENSMUSG00000022973.19	Synj1	chr16	protein_coding	synaptojanin 1
chr16	90737381	90741243	-	90737384	90741243	A3SS	0.33	50	50	ENSMUST00000170853.8	ENSMUSG00000022973.19	Synj1	chr16	protein_coding	synaptojanin 1
chr16	90743941	90747239	-	90743941;90746625	90746587;90747239	ES	0.33	50	50	ENSMUST00000154276.8	ENSMUSG00000022973.19	Synj1	chr16	protein_coding	synaptojanin 1
chr16	90743750;90743941	90743903;90747239	-	90743750	90747239	cassetteExon	0.5	100	100	ENSMUST00000231524.2	ENSMUSG00000022973.19	Synj1	chr16	protein_coding	synaptojanin 1
chr16	90746625	90747239	-	90743750	90747239	A3SS	0.33	50	50	ENSMUST00000231524.2	ENSMUSG00000022973.19	Synj1	chr16	protein_coding	synaptojanin 1
chr16	90743941	90744954	-	90743941	90747239	A5SS	0.33	50	50	ENSMUST00000125032.3	ENSMUSG00000022973.19	Synj1	chr16	protein_coding	synaptojanin 1
chr16	90761533	90764188	-	90758418	90764188	A3SS	0.5	50	50	ENSMUST00000231472.2	ENSMUSG00000022973.19	Synj1	chr16	protein_coding	synaptojanin 1
chr16	90758418	90760706	-	90758418	90764188	A5SS	0.5	50	50	ENSMUST00000231472.2	ENSMUSG00000022973.19	Synj1	chr16	protein_coding	synaptojanin 1
chr16	90822583	90824118	-	90822583;90824033	90823918;90824118	ES	0.5	50	50	ENSMUST00000118522.8	ENSMUSG00000022974.13	Paxbp1	chr16	protein_coding	PAX3 and PAX7 binding protein 1
chr16	90813888;90814527	90814453;90816051	-	90813888	90816051	cassetteExon	0.5	100	100	ENSMUST00000118522.8	ENSMUSG00000022974.13	Paxbp1	chr16	protein_coding	PAX3 and PAX7 binding protein 1
chr16	90828477	90830986	-	90827444	90830986	A3SS	0.5	50	50	ENSMUST00000118522.8	ENSMUSG00000022974.13	Paxbp1	chr16	protein_coding	PAX3 and PAX7 binding protein 1
chr16	90824217	90827304	-	90824217	90827321	A5SS	0.5	50	50	ENSMUST00000118522.8	ENSMUSG00000022974.13	Paxbp1	chr16	protein_coding	PAX3 and PAX7 binding protein 1
chr16	90853144	90865920	-	90853144;90856966	90856719;90865920	ES	0.5	50	50	ENSMUST00000035689.8	ENSMUSG00000039851.12	4932438H23Rik	chr16	protein_coding	RIKEN cDNA 4932438H23 gene
chr16	90853144	90891830	-	90853144	90865920	5pMXE	0.33	50	50	ENSMUST00000114076.2	ENSMUSG00000039851.12	4932438H23Rik	chr16	protein_coding	RIKEN cDNA 4932438H23 gene
chr16	90853144	90856719	-	90853144	90891830	A5SS	0.33	50	50	ENSMUST00000146047.2	ENSMUSG00000039851.12	4932438H23Rik	chr16	protein_coding	RIKEN cDNA 4932438H23 gene
chr16	91069943;91099624	91099461;91125793	-	91069943	91125793	cassetteExon	0.5	100	100	ENSMUST00000232580.2	ENSMUSG00000085865.3	Gm15966	chr16	lncRNA	predicted gene 15966
chr16	91108794	91125793	-	91069943	91125793	A3SS	0.2	50	50	ENSMUST00000232580.2	ENSMUSG00000085865.3	Gm15966	chr16	lncRNA	predicted gene 15966
chr16	91117728	91125793	-	91069943	91125793	A3SS	0.2	50	50	ENSMUST00000232580.2	ENSMUSG00000085865.3	Gm15966	chr16	lncRNA	predicted gene 15966
chr16	91118619	91125793	-	91069943	91125793	A3SS	0.2	50	50	ENSMUST00000232580.2	ENSMUSG00000085865.3	Gm15966	chr16	lncRNA	predicted gene 15966
chr16	91108794	91125793	-	91099624	91125793	A3SS	0.2	50	50	ENSMUST00000232074.2	ENSMUSG00000085865.3	Gm15966	chr16	lncRNA	predicted gene 15966
chr16	91117728	91125793	-	91099624	91125793	A3SS	0.2	50	50	ENSMUST00000232074.2	ENSMUSG00000085865.3	Gm15966	chr16	lncRNA	predicted gene 15966
chr16	91118619	91125793	-	91099624	91125793	A3SS	0.2	50	50	ENSMUST00000232074.2	ENSMUSG00000085865.3	Gm15966	chr16	lncRNA	predicted gene 15966
chr16	91108794	91125793	-	91108794;91117728	91117623;91125793	ES	0.33	50	50	ENSMUST00000231371.2	ENSMUSG00000085865.3	Gm15966	chr16	lncRNA	predicted gene 15966
chr16	91117728;91118619	91118542;91125793	-	91117728	91125793	cassetteExon	0.5	100	100	ENSMUST00000231371.2	ENSMUSG00000085865.3	Gm15966	chr16	lncRNA	predicted gene 15966
chr16	91108794	91117641	-	91108794	91117623	A5SS	0.33	50	50	ENSMUST00000231371.2	ENSMUSG00000085865.3	Gm15966	chr16	lncRNA	predicted gene 15966
chr16	91117728	91122589	-	91117728	91125793	A5SS	0.33	50	50	ENSMUST00000231371.2	ENSMUSG00000085865.3	Gm15966	chr16	lncRNA	predicted gene 15966
chr16	91108794	91125793	-	91108794;91117728	91117641;91125793	ES	0.33	50	50	ENSMUST00000231271.2	ENSMUSG00000085865.3	Gm15966	chr16	lncRNA	predicted gene 15966
chr16	91118619	91125793	-	91108794	91125793	A3SS	0.2	50	50	ENSMUST00000231982.2	ENSMUSG00000085865.3	Gm15966	chr16	lncRNA	predicted gene 15966
chr16	91117728	91122589	-	91117728	91118542	A5SS&ES	0.33	50	50	ENSMUST00000231983.2	ENSMUSG00000085865.3	Gm15966	chr16	lncRNA	predicted gene 15966
chr16	91108794	91125793	-	91117728	91125793	3pMXE	0.2	50	50	ENSMUST00000136853.2	ENSMUSG00000085865.3	Gm15966	chr16	lncRNA	predicted gene 15966
chr16	91181912	91184832	+	91181912;91182953	91182830;91184832	ES	0.5	50	50	ENSMUST00000023693.14	ENSMUSG00000022971.19	Ifnar2	chr16	protein_coding	interferon (alpha and beta) receptor 2
chr16	91190801	91200598	+	91190801;91196233	91196106;91200598	ES	0.5	50	50	ENSMUST00000023693.14	ENSMUSG00000022971.19	Ifnar2	chr16	protein_coding	interferon (alpha and beta) receptor 2
chr16	91190801	91204506	+	91190801	91200598	3pMXE	0.25	50	50	ENSMUST00000089042.7	ENSMUSG00000022971.19	Ifnar2	chr16	protein_coding	interferon (alpha and beta) receptor 2
chr16	91190801	91208771	+	91190801	91200598	3pMXE	0.25	50	50	ENSMUST00000089042.7	ENSMUSG00000022971.19	Ifnar2	chr16	protein_coding	interferon (alpha and beta) receptor 2
chr16	91190801;91204629	91204506;91208771	+	91190801	91208771	cassetteExon	0.5	100	100	ENSMUST00000161517.8	ENSMUSG00000093701.8	Gm21970	chr16	protein_coding	predicted gene 21970
chr16	91190801;91204629	91204506;91211501	+	91190801;91208928	91208771;91211501	MXE	0.5	100	100	ENSMUST00000161517.8	ENSMUSG00000093701.8	Gm21970	chr16	protein_coding	predicted gene 21970
chr16	91190801	91196106	+	91190801	91208771	A3SS	0.25	50	50	ENSMUST00000161517.8	ENSMUSG00000093701.8	Gm21970	chr16	protein_coding	predicted gene 21970
chr16	91204629	91211501	+	91204629;91208928	91208771;91211501	ES	0.5	50	50	ENSMUST00000160764.2	ENSMUSG00000093701.8	Gm21970	chr16	protein_coding	predicted gene 21970
chr16	91190801	91196106	+	91190801	91204506	A3SS	0.25	50	50	ENSMUST00000160764.2	ENSMUSG00000093701.8	Gm21970	chr16	protein_coding	predicted gene 21970
chr16	91203260	91204506	+	91190801	91204506	A5SS	0.33	50	50	ENSMUST00000160764.2	ENSMUSG00000093701.8	Gm21970	chr16	protein_coding	predicted gene 21970
chr16	91203504	91204506	+	91190801	91204506	A5SS	0.33	50	50	ENSMUST00000160764.2	ENSMUSG00000093701.8	Gm21970	chr16	protein_coding	predicted gene 21970
chr16	91203504	91204506	+	91203260	91204506	A5SS	0.33	50	50	ENSMUST00000023691.12	ENSMUSG00000022969.14	Il10rb	chr16	protein_coding	interleukin 10 receptor, beta
chr16	91262524	91266560	+	91262524;91264713	91264632;91266560	ES	0.5	50	50	ENSMUST00000231422.2	ENSMUSG00000084866.3	A930006K02Rik	chr16	lncRNA	RIKEN cDNA A930006K02 gene
chr16	91262524	91266767	+	91262524	91264632	A3SS&ES	0.33	50	50	ENSMUST00000231422.2	ENSMUSG00000084866.3	A930006K02Rik	chr16	lncRNA	RIKEN cDNA A930006K02 gene
chr16	91262524	91266767	+	91262524	91266560	A3SS	0.33	50	50	ENSMUST00000231990.2	ENSMUSG00000084866.3	A930006K02Rik	chr16	lncRNA	RIKEN cDNA A930006K02 gene
chr16	91286707	91292037	+	91286707;91289697	91289519;91292037	ES	0.5	50	50	ENSMUST00000023689.11	ENSMUSG00000022967.14	Ifnar1	chr16	protein_coding	interferon (alpha and beta) receptor 1
chr16	91293149;91295521	91295461;91296292	+	91293149	91296292	cassetteExon	0.5	100	100	ENSMUST00000023689.11	ENSMUSG00000022967.14	Ifnar1	chr16	protein_coding	interferon (alpha and beta) receptor 1
chr16	91292420	91293142	+	91292420	91293032	A3SS	0.5	50	50	ENSMUST00000023689.11	ENSMUSG00000022967.14	Ifnar1	chr16	protein_coding	interferon (alpha and beta) receptor 1
chr16	91302302	91303415	+	91302892	91303415	A5SS	0.33	50	50	ENSMUST00000123196.9	ENSMUSG00000022967.14	Ifnar1	chr16	protein_coding	interferon (alpha and beta) receptor 1
chr16	91302519	91303415	+	91302892	91303415	A5SS	0.33	50	50	ENSMUST00000123196.9	ENSMUSG00000022967.14	Ifnar1	chr16	protein_coding	interferon (alpha and beta) receptor 1
chr16	91302519	91303415	+	91302302	91303415	A5SS	0.33	50	50	ENSMUST00000117748.8	ENSMUSG00000022967.14	Ifnar1	chr16	protein_coding	interferon (alpha and beta) receptor 1
chr16	91286707;91289697	91289519;91293032	+	91286707;91292420	91292037;91293032	MXE	0.5	100	100	ENSMUST00000232509.2	ENSMUSG00000022967.14	Ifnar1	chr16	protein_coding	interferon (alpha and beta) receptor 1
chr16	91289697;91292420	91292037;91293032	+	91289697	91293032	cassetteExon	0.5	100	100	ENSMUST00000129878.2	ENSMUSG00000022967.14	Ifnar1	chr16	protein_coding	interferon (alpha and beta) receptor 1
chr16	91286707	91292037	+	91289697	91292037	5pMXE	0.5	50	50	ENSMUST00000231604.2	ENSMUSG00000022967.14	Ifnar1	chr16	protein_coding	interferon (alpha and beta) receptor 1
chr16	91289697	91293032	+	91289697	91292037	A3SS&ES	0.5	50	50	ENSMUST00000231604.2	ENSMUSG00000022967.14	Ifnar1	chr16	protein_coding	interferon (alpha and beta) receptor 1
chr16	91344120	91354773	+	91344120;91351968	91351836;91354773	ES	0.5	50	50	ENSMUST00000023687.9	ENSMUSG00000022965.9	Ifngr2	chr16	protein_coding	interferon gamma receptor 2
chr16	91358269	91358508	+	91357592	91358508	A5SS	0.5	50	50	ENSMUST00000023687.9	ENSMUSG00000022965.9	Ifngr2	chr16	protein_coding	interferon gamma receptor 2
chr16	91380276;91382584	91382486;91383830	-	91380276	91383830	cassetteExon	0.5	100	100	ENSMUST00000023686.15	ENSMUSG00000022964.15	Tmem50b	chr16	protein_coding	transmembrane protein 50B
chr16	91380276	91383830	-	91377182	91383830	A3SS	0.33	50	50	ENSMUST00000133180.8	ENSMUSG00000022964.15	Tmem50b	chr16	protein_coding	transmembrane protein 50B
chr16	91382584	91383830	-	91377182	91383830	A3SS	0.33	50	50	ENSMUST00000133180.8	ENSMUSG00000022964.15	Tmem50b	chr16	protein_coding	transmembrane protein 50B
chr16	91377182	91378583	-	91377182	91383830	A5SS	0.5	50	50	ENSMUST00000133180.8	ENSMUSG00000022964.15	Tmem50b	chr16	protein_coding	transmembrane protein 50B
chr16	91414267	91415476	-	91414267	91415646	A5SS	0.33	50	50	ENSMUST00000049244.10	ENSMUSG00000039763.11	Dnajc28	chr16	protein_coding	DnaJ heat shock protein family (Hsp40) member C28
chr16	91414267	91415806	-	91414267	91415646	A5SS	0.33	50	50	ENSMUST00000049244.10	ENSMUSG00000039763.11	Dnajc28	chr16	protein_coding	DnaJ heat shock protein family (Hsp40) member C28
chr16	91414267	91415806	-	91414267	91415476	A5SS	0.33	50	50	ENSMUST00000169982.2	ENSMUSG00000039763.11	Dnajc28	chr16	protein_coding	DnaJ heat shock protein family (Hsp40) member C28
chr16	91418632	91418735	-	91418636	91418735	A3SS	0.33	50	50	ENSMUST00000023684.14	ENSMUSG00000022962.16	Gart	chr16	protein_coding	phosphoribosylglycinamide formyltransferase
chr16	91418663	91418735	-	91418636	91418735	A3SS	0.33	50	50	ENSMUST00000023684.14	ENSMUSG00000022962.16	Gart	chr16	protein_coding	phosphoribosylglycinamide formyltransferase
chr16	91440031	91443772	-	91440034	91443772	A3SS	0.5	50	50	ENSMUST00000023684.14	ENSMUSG00000022962.16	Gart	chr16	protein_coding	phosphoribosylglycinamide formyltransferase
chr16	91433050	91433391	-	91433050	91433395	A5SS	0.5	50	50	ENSMUST00000023684.14	ENSMUSG00000022962.16	Gart	chr16	protein_coding	phosphoribosylglycinamide formyltransferase
chr16	91440034	91443615	-	91440034	91443772	A5SS	0.5	50	50	ENSMUST00000023684.14	ENSMUSG00000022962.16	Gart	chr16	protein_coding	phosphoribosylglycinamide formyltransferase
chr16	91418632	91418735	-	91418663	91418735	A3SS	0.33	50	50	ENSMUST00000232640.2	ENSMUSG00000022962.16	Gart	chr16	protein_coding	phosphoribosylglycinamide formyltransferase
chr16	91440031	91443615	-	91440031	91443772	A5SS	0.5	50	50	ENSMUST00000232289.2	ENSMUSG00000022962.16	Gart	chr16	protein_coding	phosphoribosylglycinamide formyltransferase
chr16	91440031	91443615	-	91440034	91443615	A3SS	0.5	50	50	ENSMUST00000232367.2	ENSMUSG00000022962.16	Gart	chr16	protein_coding	phosphoribosylglycinamide formyltransferase
chr16	91448684	91458989	+	91448684;91457468	91451499;91458989	ES	0.5	50	50	ENSMUST00000117633.8	ENSMUSG00000022961.19	Son	chr16	protein_coding	Son DNA binding protein
chr16	91468353;91471662	91471583;91472289	+	91468353	91472289	cassetteExon	0.5	100	100	ENSMUST00000117633.8	ENSMUSG00000022961.19	Son	chr16	protein_coding	Son DNA binding protein
chr16	91459149	91459380	+	91459149	91461086	A3SS	0.5	50	50	ENSMUST00000117633.8	ENSMUSG00000022961.19	Son	chr16	protein_coding	Son DNA binding protein
chr16	91461710	91461808	+	91461710	91467352	A3SS	0.5	50	50	ENSMUST00000117633.8	ENSMUSG00000022961.19	Son	chr16	protein_coding	Son DNA binding protein
chr16	91468353	91468836	+	91468353	91472289	A3SS	0.33	50	50	ENSMUST00000117633.8	ENSMUSG00000022961.19	Son	chr16	protein_coding	Son DNA binding protein
chr16	91474592	91474989	+	91474592	91475042	A3SS	0.5	50	50	ENSMUST00000117633.8	ENSMUSG00000022961.19	Son	chr16	protein_coding	Son DNA binding protein
chr16	91468353	91468836	+	91468353	91471583	A3SS	0.33	50	50	ENSMUST00000140312.8	ENSMUSG00000022961.19	Son	chr16	protein_coding	Son DNA binding protein
chr16	91470910	91471583	+	91468353	91471583	A5SS	0.33	50	50	ENSMUST00000140312.8	ENSMUSG00000022961.19	Son	chr16	protein_coding	Son DNA binding protein
chr16	91471029	91471583	+	91468353	91471583	A5SS	0.33	50	50	ENSMUST00000140312.8	ENSMUSG00000022961.19	Son	chr16	protein_coding	Son DNA binding protein
chr16	91448684	91451499	+	91448684	91458989	A3SS	0.5	50	50	ENSMUST00000122302.8	ENSMUSG00000022961.19	Son	chr16	protein_coding	Son DNA binding protein
chr16	91457468	91458989	+	91448684	91458989	A5SS	0.5	50	50	ENSMUST00000122302.8	ENSMUSG00000022961.19	Son	chr16	protein_coding	Son DNA binding protein
chr16	91468353	91472289	+	91471662	91472289	A5SS&ES	0.5	50	50	ENSMUST00000147891.8	ENSMUSG00000022961.19	Son	chr16	protein_coding	Son DNA binding protein
chr16	91470910	91471583	+	91471029	91471583	A5SS	0.33	50	50	ENSMUST00000147891.8	ENSMUSG00000022961.19	Son	chr16	protein_coding	Son DNA binding protein
chr16	91470666	91470857	+	91470666	91470873	A3SS	0.5	50	50	ENSMUST00000147461.8	ENSMUSG00000022961.19	Son	chr16	protein_coding	Son DNA binding protein
chr16	91476914	91478983	-	91476914	91478045	5pMXE	0.5	50	50	ENSMUST00000231459.2	ENSMUSG00000022960.14	Donson	chr16	protein_coding	downstream neighbor of SON
chr16	91474507	91476769	-	91473811	91476769	A3SS	0.5	50	50	ENSMUST00000231459.2	ENSMUSG00000022960.14	Donson	chr16	protein_coding	downstream neighbor of SON
chr16	91476914	91478983	-	91476914;91478257	91478045;91478983	ES	0.33	50	50	ENSMUST00000133942.8	ENSMUSG00000022960.14	Donson	chr16	protein_coding	downstream neighbor of SON
chr16	91479709	91481190	-	91479709;91480699	91480521;91481190	ES	0.33	50	50	ENSMUST00000133942.8	ENSMUSG00000022960.14	Donson	chr16	protein_coding	downstream neighbor of SON
chr16	91480699	91483055	-	91480699	91481190	5pMXE	0.5	50	50	ENSMUST00000133942.8	ENSMUSG00000022960.14	Donson	chr16	protein_coding	downstream neighbor of SON
chr16	91478112	91478983	-	91478257	91478983	A3SS	0.33	50	50	ENSMUST00000133942.8	ENSMUSG00000022960.14	Donson	chr16	protein_coding	downstream neighbor of SON
chr16	91480699	91483055	-	91480699;91481368	91481190;91483055	ES	0.5	50	50	ENSMUST00000123893.8	ENSMUSG00000022960.14	Donson	chr16	protein_coding	downstream neighbor of SON
chr16	91483258	91485295	-	91483258;91484763	91484683;91485295	ES	0.5	50	50	ENSMUST00000123893.8	ENSMUSG00000022960.14	Donson	chr16	protein_coding	downstream neighbor of SON
chr16	91483137	91484683	-	91483258	91484683	A3SS	0.5	50	50	ENSMUST00000123893.8	ENSMUSG00000022960.14	Donson	chr16	protein_coding	downstream neighbor of SON
chr16	91476914	91478983	-	91476914;91478112	91478045;91478983	ES	0.33	50	50	ENSMUST00000117159.8	ENSMUSG00000022960.14	Donson	chr16	protein_coding	downstream neighbor of SON
chr16	91478257	91481190	-	91480699	91481190	A3SS&ES	0.33	50	50	ENSMUST00000117159.8	ENSMUSG00000022960.14	Donson	chr16	protein_coding	downstream neighbor of SON
chr16	91478257;91481368	91481190;91483055	-	91478257;91480699	91478983;91483055	MXE	0.5	100	100	ENSMUST00000139324.8	ENSMUSG00000022960.14	Donson	chr16	protein_coding	downstream neighbor of SON
chr16	91479709;91481368	91481190;91483055	-	91479709;91480699	91480521;91483055	MXE	0.5	100	100	ENSMUST00000139324.8	ENSMUSG00000022960.14	Donson	chr16	protein_coding	downstream neighbor of SON
chr16	91476914;91478257	91478045;91481190	-	91476914;91480699	91478983;91481190	MXE	0.5	100	100	ENSMUST00000114031.8	ENSMUSG00000022960.14	Donson	chr16	protein_coding	downstream neighbor of SON
chr16	91483258	91485295	-	91483258	91484683	5pMXE	0.33	50	50	ENSMUST00000145833.8	ENSMUSG00000022960.14	Donson	chr16	protein_coding	downstream neighbor of SON
chr16	91483258	91723347	-	91483258	91484683	5pMXE	0.33	50	50	ENSMUST00000145833.8	ENSMUSG00000022960.14	Donson	chr16	protein_coding	downstream neighbor of SON
chr16	91479709	91481190	-	91478257	91481190	A3SS	0.33	50	50	ENSMUST00000145833.8	ENSMUSG00000022960.14	Donson	chr16	protein_coding	downstream neighbor of SON
chr16	91480699	91483055	-	91481368	91483055	A3SS&ES	0.5	50	50	ENSMUST00000145833.8	ENSMUSG00000022960.14	Donson	chr16	protein_coding	downstream neighbor of SON
chr16	91478257	91478983	-	91478257	91481190	A5SS	0.5	50	50	ENSMUST00000145833.8	ENSMUSG00000022960.14	Donson	chr16	protein_coding	downstream neighbor of SON
chr16	91483258	91485295	-	91484763	91485295	A3SS&ES	0.5	50	50	ENSMUST00000144461.2	ENSMUSG00000022960.14	Donson	chr16	protein_coding	downstream neighbor of SON
chr16	91483258	91723347	-	91483258	91485295	5pMXE	0.33	50	50	ENSMUST00000138560.2	ENSMUSG00000022960.14	Donson	chr16	protein_coding	downstream neighbor of SON
chr16	91723459	91725787	-	91723459	91723741	5pMXE	0.5	50	50	ENSMUST00000159295.8	ENSMUSG00000116933.2	Atp5o	chr16	protein_coding	ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
chr16	91722515	91723347	-	91483258	91723347	A3SS	0.5	50	50	ENSMUST00000159295.8	ENSMUSG00000116933.2	Atp5o	chr16	protein_coding	ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
chr16	91507148	91510940	+	91507148	91508636	3pMXE	0.5	50	50	ENSMUST00000232491.2	ENSMUSG00000085169.3	Gm10785	chr16	lncRNA	predicted gene 10785
chr16	91504181	91509083	-	91504181;91505761	91505717;91509083	ES	0.33	50	50	ENSMUST00000073466.13	ENSMUSG00000058240.15	Cryzl1	chr16	protein_coding	crystallin, zeta (quinone reductase)-like 1
chr16	91509155	91514292	-	91509155;91511714	91511637;91514292	ES	0.33	50	50	ENSMUST00000073466.13	ENSMUSG00000058240.15	Cryzl1	chr16	protein_coding	crystallin, zeta (quinone reductase)-like 1
chr16	91489287	91491070	-	91489592	91491070	A3SS&ES	0.5	50	50	ENSMUST00000073466.13	ENSMUSG00000058240.15	Cryzl1	chr16	protein_coding	crystallin, zeta (quinone reductase)-like 1
chr16	91489360	91489487	-	91487637	91489487	A3SS	0.5	50	50	ENSMUST00000073466.13	ENSMUSG00000058240.15	Cryzl1	chr16	protein_coding	crystallin, zeta (quinone reductase)-like 1
chr16	91491553	91492149	-	91491188	91492149	A3SS	0.5	50	50	ENSMUST00000073466.13	ENSMUSG00000058240.15	Cryzl1	chr16	protein_coding	crystallin, zeta (quinone reductase)-like 1
chr16	91512294	91514292	-	91511714	91514292	A3SS	0.33	50	50	ENSMUST00000073466.13	ENSMUSG00000058240.15	Cryzl1	chr16	protein_coding	crystallin, zeta (quinone reductase)-like 1
chr16	91489592	91489732	-	91489592	91491070	A5SS	0.5	50	50	ENSMUST00000073466.13	ENSMUSG00000058240.15	Cryzl1	chr16	protein_coding	crystallin, zeta (quinone reductase)-like 1
chr16	91498093	91509083	-	91498093;91504181	91504113;91509083	ES	0.33	50	50	ENSMUST00000117644.8	ENSMUSG00000058240.15	Cryzl1	chr16	protein_coding	crystallin, zeta (quinone reductase)-like 1
chr16	91492247	91496065	-	91486803	91496065	A3SS	0.5	50	50	ENSMUST00000122254.8	ENSMUSG00000058240.15	Cryzl1	chr16	protein_coding	crystallin, zeta (quinone reductase)-like 1
chr16	91505761	91509083	-	91498093	91509083	A3SS	0.33	50	50	ENSMUST00000122254.8	ENSMUSG00000058240.15	Cryzl1	chr16	protein_coding	crystallin, zeta (quinone reductase)-like 1
chr16	91486803	91487592	-	91486803	91496065	A5SS	0.5	50	50	ENSMUST00000122254.8	ENSMUSG00000058240.15	Cryzl1	chr16	protein_coding	crystallin, zeta (quinone reductase)-like 1
chr16	91504181	91509083	-	91504181	91505717	5pMXE	0.5	50	50	ENSMUST00000144472.8	ENSMUSG00000058240.15	Cryzl1	chr16	protein_coding	crystallin, zeta (quinone reductase)-like 1
chr16	91512294	91514292	-	91509155	91514292	A3SS	0.33	50	50	ENSMUST00000231499.2	ENSMUSG00000058240.15	Cryzl1	chr16	protein_coding	crystallin, zeta (quinone reductase)-like 1
chr16	91509155	91514292	-	91511714	91514292	3pMXE	0.33	50	50	ENSMUST00000128975.8	ENSMUSG00000058240.15	Cryzl1	chr16	protein_coding	crystallin, zeta (quinone reductase)-like 1
chr16	91638498	91647694	+	91638498;91645857	91645610;91647694	ES	0.5	50	50	ENSMUST00000114001.8	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91651543	91658082	+	91651543;91655263	91655097;91658082	ES	0.5	50	50	ENSMUST00000114001.8	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91666697	91684288	+	91666697	91667081	3pMXE	0.5	50	50	ENSMUST00000114001.8	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91638498;91639530	91639516;91645610	+	91638498	91645610	cassetteExon	0.5	100	100	ENSMUST00000114001.8	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91638498;91639530	91639523;91645610	+	91638498	91645610	cassetteExon	0.5	100	100	ENSMUST00000114001.8	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91590655	91598415	+	91590655	91598526	A3SS	0.25	50	50	ENSMUST00000114001.8	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91590655	91599926	+	91590655	91598526	A3SS&ES	0.25	50	50	ENSMUST00000114001.8	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91647853	91649751	+	91647853	91650583	A3SS	0.5	50	50	ENSMUST00000114001.8	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91527463	91579049	+	91526487	91579049	A5SS	0.33	50	50	ENSMUST00000114001.8	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91553120	91579049	+	91526487	91579049	A5SS	0.33	50	50	ENSMUST00000114001.8	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91601575	91602981	+	91600019	91602981	A5SS	0.5	50	50	ENSMUST00000114001.8	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91590655	91599926	+	91590655	91598415	A3SS&ES	0.25	50	50	ENSMUST00000113999.8	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91638498	91639523	+	91638498	91639516	A3SS	0.25	50	50	ENSMUST00000113999.8	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91693313	91702175	+	91693313;91696560	91696393;91702175	ES	0.25	50	50	ENSMUST00000064797.12	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91696560	91703646	+	91696560;91702387	91702175;91703646	ES	0.5	50	50	ENSMUST00000064797.12	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91674631	91684288	+	91666697	91684288	A5SS	0.5	50	50	ENSMUST00000064797.12	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91701101	91702175	+	91696560	91702175	A5SS	0.25	50	50	ENSMUST00000064797.12	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91701326	91702175	+	91696560	91702175	A5SS	0.25	50	50	ENSMUST00000064797.12	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91651543;91658127	91658082;91660145	+	91651543	91660145	cassetteExon	0.5	100	100	ENSMUST00000113996.8	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91651543	91655097	+	91651543	91660145	A3SS	0.33	50	50	ENSMUST00000113996.8	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91590655	91624749	+	91590655	91598415	3pMXE	0.25	50	50	ENSMUST00000231535.2	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91553120	91579049	+	91527463	91579049	A5SS	0.33	50	50	ENSMUST00000231535.2	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91590655	91598526	+	91590655	91624749	A3SS	0.25	50	50	ENSMUST00000133389.2	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91590655	91599926	+	91590655	91624749	A3SS	0.25	50	50	ENSMUST00000133389.2	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91617707	91624749	+	91590655	91624749	A5SS	0.5	50	50	ENSMUST00000133389.2	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91638498	91639516	+	91638498	91647694	A3SS	0.25	50	50	ENSMUST00000154967.2	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91638498	91639523	+	91638498	91647694	A3SS	0.25	50	50	ENSMUST00000154967.2	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91638498	91645610	+	91639530	91645610	5pMXE	0.5	50	50	ENSMUST00000143023.2	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91693313;91696560	91696393;91703646	+	91693313;91702387	91702175;91703646	MXE	0.5	100	100	ENSMUST00000125052.8	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91693313;91696560	91696393;91705291	+	91693313;91703767	91702175;91705291	MXE	0.5	100	100	ENSMUST00000125052.8	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91701101	91702175	+	91693313	91702175	A5SS	0.25	50	50	ENSMUST00000125052.8	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91701326	91702175	+	91693313	91702175	A5SS	0.25	50	50	ENSMUST00000125052.8	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91696560;91703767	91703646;91705291	+	91696560	91705291	cassetteExon	0.5	100	100	ENSMUST00000131739.2	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91696560	91702175	+	91696560	91705291	A3SS	0.33	50	50	ENSMUST00000131739.2	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91701101	91702175	+	91701326	91702175	A5SS	0.25	50	50	ENSMUST00000231852.2	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91701101;91701326	91701185;91702175	+	91701101	91702175	cassetteExon	0.5	100	100	ENSMUST00000232198.2	ENSMUSG00000022957.21	Itsn1	chr16	protein_coding	intersectin 1 (SH3 domain protein 1A)
chr16	91723459	91725787	-	91723459;91723870	91723741;91725787	ES	0.5	50	50	ENSMUST00000023677.10	ENSMUSG00000022956.12	Atp5o	chr16	protein_coding	ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
chr16	91727292	91728024	-	91727292	91728408	A5SS	0.33	50	50	ENSMUST00000023677.10	ENSMUSG00000022956.12	Atp5o	chr16	protein_coding	ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
chr16	91727292	91728136	-	91727292	91728408	A5SS	0.33	50	50	ENSMUST00000023677.10	ENSMUSG00000022956.12	Atp5o	chr16	protein_coding	ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
chr16	91727292	91728136	-	91727292	91728024	A5SS	0.33	50	50	ENSMUST00000139277.8	ENSMUSG00000022956.12	Atp5o	chr16	protein_coding	ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
chr16	91723459	91725787	-	91723870	91725787	3pMXE	0.5	50	50	ENSMUST00000154661.8	ENSMUSG00000022956.12	Atp5o	chr16	protein_coding	ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
chr16	91896621	91981798	+	91896621	91908621	3pMXE	0.5	50	50	ENSMUST00000047429.9	ENSMUSG00000039680.11	Mrps6	chr16	protein_coding	mitochondrial ribosomal protein S6
chr16	91855368	91873608	+	91855368	91896482	A3SS	0.5	50	50	ENSMUST00000047429.9	ENSMUSG00000039680.11	Mrps6	chr16	protein_coding	mitochondrial ribosomal protein S6
chr16	91856180	91896482	+	91855368	91896482	A5SS	0.5	50	50	ENSMUST00000047429.9	ENSMUSG00000039680.11	Mrps6	chr16	protein_coding	mitochondrial ribosomal protein S6
chr16	91903355	91908621	+	91896621	91908621	A5SS	0.5	50	50	ENSMUST00000047429.9	ENSMUSG00000039680.11	Mrps6	chr16	protein_coding	mitochondrial ribosomal protein S6
chr16	91923649	91981798	+	91896621	91981798	A5SS	0.5	50	50	ENSMUST00000232677.2	ENSMUSG00000116930.2	Gm49711	chr16	protein_coding	predicted gene, 49711
chr16	92092580	92093463	+	92089411	92093463	A5SS	0.5	50	50	ENSMUST00000047383.10	ENSMUSG00000039672.13	Kcne2	chr16	protein_coding	potassium voltage-gated channel, Isk-related subfamily, gene 2
chr16	92145880	92155723	-	92145880	92156194	A5SS	0.5	50	50	ENSMUST00000051705.7	ENSMUSG00000039639.8	Kcne1	chr16	protein_coding	potassium voltage-gated channel, Isk-related subfamily, member 1
chr16	92194324	92267703	-	92194324	92262721	5pMXE	0.25	50	50	ENSMUST00000060005.15	ENSMUSG00000022951.17	Rcan1	chr16	protein_coding	regulator of calcineurin 1
chr16	92194324	92196784	-	92194324	92262721	A5SS	0.25	50	50	ENSMUST00000060005.15	ENSMUSG00000022951.17	Rcan1	chr16	protein_coding	regulator of calcineurin 1
chr16	92194324	92255146	-	92194324	92262721	A5SS	0.25	50	50	ENSMUST00000060005.15	ENSMUSG00000022951.17	Rcan1	chr16	protein_coding	regulator of calcineurin 1
chr16	92194324	92255146	-	92194324	92196784	5pMXE	0.25	50	50	ENSMUST00000023672.10	ENSMUSG00000022951.17	Rcan1	chr16	protein_coding	regulator of calcineurin 1
chr16	92194324	92267703	-	92194324	92196784	5pMXE	0.25	50	50	ENSMUST00000023672.10	ENSMUSG00000022951.17	Rcan1	chr16	protein_coding	regulator of calcineurin 1
chr16	92195865	92196784	-	92194324	92196784	A3SS	0.5	50	50	ENSMUST00000023672.10	ENSMUSG00000022951.17	Rcan1	chr16	protein_coding	regulator of calcineurin 1
chr16	92194324	92267703	-	92194324	92255146	5pMXE	0.25	50	50	ENSMUST00000231410.2	ENSMUSG00000022951.17	Rcan1	chr16	protein_coding	regulator of calcineurin 1
chr16	92296445	92324948	+	92282779	92324948	A5SS	0.5	50	50	ENSMUST00000162181.8	ENSMUSG00000022949.10	Clic6	chr16	protein_coding	chloride intracellular channel 6
chr16	92410648	92465596	-	92410648;92441233	92441042;92465596	ES	0.5	50	50	ENSMUST00000023673.14	ENSMUSG00000022952.18	Runx1	chr16	protein_coding	runt related transcription factor 1
chr16	92484192	92485864	-	92465700	92485864	A3SS	0.5	50	50	ENSMUST00000023673.14	ENSMUSG00000022952.18	Runx1	chr16	protein_coding	runt related transcription factor 1
chr16	92614596	92622477	-	92492625	92622477	A3SS	0.5	50	50	ENSMUST00000023673.14	ENSMUSG00000022952.18	Runx1	chr16	protein_coding	runt related transcription factor 1
chr16	92492625	92492797	-	92492625	92622477	A5SS	0.5	50	50	ENSMUST00000023673.14	ENSMUSG00000022952.18	Runx1	chr16	protein_coding	runt related transcription factor 1
chr16	93161675	93162257	-	93161675	93161954	5pMXE	0.33	50	50	ENSMUST00000232060.2	ENSMUSG00000100277.9	1810053B23Rik	chr16	lncRNA	RIKEN cDNA 1810053B23 gene
chr16	93161675	93163537	-	93161675	93161954	5pMXE	0.33	50	50	ENSMUST00000232060.2	ENSMUSG00000100277.9	1810053B23Rik	chr16	lncRNA	RIKEN cDNA 1810053B23 gene
chr16	93141935;93144076	93144028;93155883	-	93141935;93143987	93143748;93155883	MXE	0.5	100	100	ENSMUST00000232060.2	ENSMUSG00000100277.9	1810053B23Rik	chr16	lncRNA	RIKEN cDNA 1810053B23 gene
chr16	93155946;93157328	93157253;93161476	-	93155946	93161476	cassetteExon	0.5	100	100	ENSMUST00000232060.2	ENSMUSG00000100277.9	1810053B23Rik	chr16	lncRNA	RIKEN cDNA 1810053B23 gene
chr16	93140966	93141763	-	93139566	93141763	A3SS	0.33	50	50	ENSMUST00000232060.2	ENSMUSG00000100277.9	1810053B23Rik	chr16	lncRNA	RIKEN cDNA 1810053B23 gene
chr16	93141259	93141763	-	93139566	93141763	A3SS	0.33	50	50	ENSMUST00000232060.2	ENSMUSG00000100277.9	1810053B23Rik	chr16	lncRNA	RIKEN cDNA 1810053B23 gene
chr16	93143987	93150870	-	93143987	93155883	A5SS	0.33	50	50	ENSMUST00000232060.2	ENSMUSG00000100277.9	1810053B23Rik	chr16	lncRNA	RIKEN cDNA 1810053B23 gene
chr16	93143987	93155513	-	93143987	93155883	A5SS	0.33	50	50	ENSMUST00000232060.2	ENSMUSG00000100277.9	1810053B23Rik	chr16	lncRNA	RIKEN cDNA 1810053B23 gene
chr16	93155946	93156342	-	93155946	93161476	A5SS	0.25	50	50	ENSMUST00000232060.2	ENSMUSG00000100277.9	1810053B23Rik	chr16	lncRNA	RIKEN cDNA 1810053B23 gene
chr16	93155946	93156385	-	93155946	93161476	A5SS	0.25	50	50	ENSMUST00000232060.2	ENSMUSG00000100277.9	1810053B23Rik	chr16	lncRNA	RIKEN cDNA 1810053B23 gene
chr16	93141935;93144076	93144028;93155513	-	93141935;93143987	93143748;93155513	MXE	0.5	100	100	ENSMUST00000188056.7	ENSMUSG00000100277.9	1810053B23Rik	chr16	lncRNA	RIKEN cDNA 1810053B23 gene
chr16	93140966	93141763	-	93141259	93141763	A3SS	0.33	50	50	ENSMUST00000188056.7	ENSMUSG00000100277.9	1810053B23Rik	chr16	lncRNA	RIKEN cDNA 1810053B23 gene
chr16	93143987	93150870	-	93143987	93155513	A5SS	0.33	50	50	ENSMUST00000188056.7	ENSMUSG00000100277.9	1810053B23Rik	chr16	lncRNA	RIKEN cDNA 1810053B23 gene
chr16	93141935	93144028	-	93141935;93143884	93143748;93144028	ES	0.5	50	50	ENSMUST00000231377.2	ENSMUSG00000100277.9	1810053B23Rik	chr16	lncRNA	RIKEN cDNA 1810053B23 gene
chr16	93144076	93155883	-	93144076	93155513	5pMXE	0.33	50	50	ENSMUST00000231377.2	ENSMUSG00000100277.9	1810053B23Rik	chr16	lncRNA	RIKEN cDNA 1810053B23 gene
chr16	93143987	93155513	-	93144076	93155513	A3SS&ES	0.5	50	50	ENSMUST00000231377.2	ENSMUSG00000100277.9	1810053B23Rik	chr16	lncRNA	RIKEN cDNA 1810053B23 gene
chr16	93144076	93149919	-	93144076	93155513	A5SS	0.33	50	50	ENSMUST00000231377.2	ENSMUSG00000100277.9	1810053B23Rik	chr16	lncRNA	RIKEN cDNA 1810053B23 gene
chr16	93144076	93155883	-	93144076	93149919	5pMXE	0.33	50	50	ENSMUST00000185971.7	ENSMUSG00000100277.9	1810053B23Rik	chr16	lncRNA	RIKEN cDNA 1810053B23 gene
chr16	93141935	93144028	-	93141935	93143748	A5SS	0.5	50	50	ENSMUST00000185971.7	ENSMUSG00000100277.9	1810053B23Rik	chr16	lncRNA	RIKEN cDNA 1810053B23 gene
chr16	93161675	93163537	-	93161675	93162257	5pMXE	0.33	50	50	ENSMUST00000232511.2	ENSMUSG00000100277.9	1810053B23Rik	chr16	lncRNA	RIKEN cDNA 1810053B23 gene
chr16	93155946	93157253	-	93155946	93156342	5pMXE	0.25	50	50	ENSMUST00000232221.2	ENSMUSG00000100277.9	1810053B23Rik	chr16	lncRNA	RIKEN cDNA 1810053B23 gene
chr16	93155946	93156385	-	93155946	93156342	A5SS	0.25	50	50	ENSMUST00000232221.2	ENSMUSG00000100277.9	1810053B23Rik	chr16	lncRNA	RIKEN cDNA 1810053B23 gene
chr16	93155946	93156385	-	93155946	93157253	A5SS	0.25	50	50	ENSMUST00000231869.2	ENSMUSG00000100277.9	1810053B23Rik	chr16	lncRNA	RIKEN cDNA 1810053B23 gene
chr16	93143987	93155883	-	93144076	93155883	A3SS	0.5	50	50	ENSMUST00000185555.7	ENSMUSG00000100277.9	1810053B23Rik	chr16	lncRNA	RIKEN cDNA 1810053B23 gene
chr16	93222086	93255581	-	93222086	93222659	5pMXE	0.5	50	50	ENSMUST00000189879.7	ENSMUSG00000099968.8	1700029J03Rik	chr16	lncRNA	RIKEN cDNA 1700029J03 gene
chr16	93194008	93194211	-	93188728	93194211	A3SS	0.5	50	50	ENSMUST00000189879.7	ENSMUSG00000099968.8	1700029J03Rik	chr16	lncRNA	RIKEN cDNA 1700029J03 gene
chr16	93194513	93255581	-	93194513;93222086	93221982;93255581	ES	0.33	50	50	ENSMUST00000231275.2	ENSMUSG00000099968.8	1700029J03Rik	chr16	lncRNA	RIKEN cDNA 1700029J03 gene
chr16	93230074	93255581	-	93222086	93255581	A3SS	0.33	50	50	ENSMUST00000231275.2	ENSMUSG00000099968.8	1700029J03Rik	chr16	lncRNA	RIKEN cDNA 1700029J03 gene
chr16	93230074	93255581	-	93194513	93255581	A3SS	0.33	50	50	ENSMUST00000185803.2	ENSMUSG00000099968.8	1700029J03Rik	chr16	lncRNA	RIKEN cDNA 1700029J03 gene
chr16	93398686	93400454	-	93398686;93400084	93400025;93400454	ES	0.25	50	50	ENSMUST00000123756.8	ENSMUSG00000022948.17	Setd4	chr16	protein_coding	SET domain containing 4
chr16	93380572;93380788	93380689;93382067	-	93380572	93382067	cassetteExon	0.5	100	100	ENSMUST00000123756.8	ENSMUSG00000022948.17	Setd4	chr16	protein_coding	SET domain containing 4
chr16	93382842	93383125	-	93382190	93383125	A3SS	0.5	50	50	ENSMUST00000123756.8	ENSMUSG00000022948.17	Setd4	chr16	protein_coding	SET domain containing 4
chr16	93390220	93393186	-	93390223	93393186	A3SS	0.5	50	50	ENSMUST00000123756.8	ENSMUSG00000022948.17	Setd4	chr16	protein_coding	SET domain containing 4
chr16	93400098	93400454	-	93400084	93400454	A3SS	0.25	50	50	ENSMUST00000123756.8	ENSMUSG00000022948.17	Setd4	chr16	protein_coding	SET domain containing 4
chr16	93400099	93400454	-	93400084	93400454	A3SS	0.25	50	50	ENSMUST00000123756.8	ENSMUSG00000022948.17	Setd4	chr16	protein_coding	SET domain containing 4
chr16	93383205	93383313	-	93383205	93384707	A5SS	0.5	50	50	ENSMUST00000123756.8	ENSMUSG00000022948.17	Setd4	chr16	protein_coding	SET domain containing 4
chr16	93384788	93384898	-	93384788	93386799	A5SS	0.5	50	50	ENSMUST00000123756.8	ENSMUSG00000022948.17	Setd4	chr16	protein_coding	SET domain containing 4
chr16	93386973	93387762	-	93386973	93387144	A5SS	0.5	50	50	ENSMUST00000123756.8	ENSMUSG00000022948.17	Setd4	chr16	protein_coding	SET domain containing 4
chr16	93398686	93400454	-	93398686;93400098	93400025;93400454	ES	0.25	50	50	ENSMUST00000023669.14	ENSMUSG00000022948.17	Setd4	chr16	protein_coding	SET domain containing 4
chr16	93386973;93387174	93387144;93387762	-	93386973	93387762	cassetteExon	0.5	100	100	ENSMUST00000023669.14	ENSMUSG00000022948.17	Setd4	chr16	protein_coding	SET domain containing 4
chr16	93398686	93400454	-	93398686;93400099	93400025;93400454	ES	0.25	50	50	ENSMUST00000233931.2	ENSMUSG00000022948.17	Setd4	chr16	protein_coding	SET domain containing 4
chr16	93400098	93400454	-	93400099	93400454	A3SS	0.25	50	50	ENSMUST00000233931.2	ENSMUSG00000022948.17	Setd4	chr16	protein_coding	SET domain containing 4
chr16	93380572	93382067	-	93380572	93380689	5pMXE	0.5	50	50	ENSMUST00000233912.2	ENSMUSG00000022948.17	Setd4	chr16	protein_coding	SET domain containing 4
chr16	93396195	93398526	-	93396195	93400862	A5SS	0.5	50	50	ENSMUST00000156298.2	ENSMUSG00000022948.17	Setd4	chr16	protein_coding	SET domain containing 4
chr16	93403861	93404075	+	93403861	93404384	A3SS	0.5	50	50	ENSMUST00000231450.2	ENSMUSG00000051483.10	Cbr1	chr16	protein_coding	carbonyl reductase 1
chr16	93405784	93406687	+	93405784	93406683	A3SS	0.5	50	50	ENSMUST00000231450.2	ENSMUSG00000051483.10	Cbr1	chr16	protein_coding	carbonyl reductase 1
chr16	93480501;93481648	93481565;93481935	+	93480501	93481935	cassetteExon	0.5	100	100	ENSMUST00000039620.7	ENSMUSG00000022947.9	Cbr3	chr16	protein_coding	carbonyl reductase 3
chr16	93574381;93577335	93577261;93577645	+	93574381	93577645	cassetteExon	0.5	100	100	ENSMUST00000045004.11	ENSMUSG00000022946.11	Dop1b	chr16	protein_coding	DOP1 leucine zipper like protein B
chr16	93559599	93560249	+	93559599	93560046	A3SS	0.5	50	50	ENSMUST00000045004.11	ENSMUSG00000022946.11	Dop1b	chr16	protein_coding	DOP1 leucine zipper like protein B
chr16	93590119	93595791	+	93590119	93595794	A3SS	0.5	50	50	ENSMUST00000045004.11	ENSMUSG00000022946.11	Dop1b	chr16	protein_coding	DOP1 leucine zipper like protein B
chr16	93600478	93603276	+	93600478	93603223	A3SS	0.33	50	50	ENSMUST00000045004.11	ENSMUSG00000022946.11	Dop1b	chr16	protein_coding	DOP1 leucine zipper like protein B
chr16	93600478	93603293	+	93600478	93603223	A3SS	0.33	50	50	ENSMUST00000045004.11	ENSMUSG00000022946.11	Dop1b	chr16	protein_coding	DOP1 leucine zipper like protein B
chr16	93527330	93536042	+	93513200	93536042	A5SS	0.5	50	50	ENSMUST00000045004.11	ENSMUSG00000022946.11	Dop1b	chr16	protein_coding	DOP1 leucine zipper like protein B
chr16	93573664	93573775	+	93570997	93573775	A5SS	0.5	50	50	ENSMUST00000045004.11	ENSMUSG00000022946.11	Dop1b	chr16	protein_coding	DOP1 leucine zipper like protein B
chr16	93606523	93606984	+	93606309	93606984	A5SS	0.5	50	50	ENSMUST00000045004.11	ENSMUSG00000022946.11	Dop1b	chr16	protein_coding	DOP1 leucine zipper like protein B
chr16	93600478	93603293	+	93600478	93603276	A3SS	0.33	50	50	ENSMUST00000226215.2	ENSMUSG00000022946.11	Dop1b	chr16	protein_coding	DOP1 leucine zipper like protein B
chr16	93629236	93641082	+	93629236;93638331	93638259;93641082	ES	0.5	50	50	ENSMUST00000044068.10	ENSMUSG00000039456.11	Morc3	chr16	protein_coding	microrchidia 3
chr16	93641214;93641936	93641841;93642028	+	93641214	93642028	cassetteExon	0.5	100	100	ENSMUST00000044068.10	ENSMUSG00000039456.11	Morc3	chr16	protein_coding	microrchidia 3
chr16	93659391	93659529	+	93659424	93659529	A5SS	0.5	50	50	ENSMUST00000044068.10	ENSMUSG00000039456.11	Morc3	chr16	protein_coding	microrchidia 3
chr16	93641214	93642028	+	93641936	93642028	5pMXE	0.5	50	50	ENSMUST00000202663.2	ENSMUSG00000039456.11	Morc3	chr16	protein_coding	microrchidia 3
chr16	93680863	93681321	+	93680863	93681354	A3SS	0.5	50	50	ENSMUST00000023666.11	ENSMUSG00000022945.13	Chaf1b	chr16	protein_coding	chromatin assembly factor 1, subunit B (p60)
chr16	93681253	93681354	+	93680863	93681354	A5SS	0.5	50	50	ENSMUST00000023666.11	ENSMUSG00000022945.13	Chaf1b	chr16	protein_coding	chromatin assembly factor 1, subunit B (p60)
chr16	93689787	93691625	+	93689713	93691625	A5SS	0.5	50	50	ENSMUST00000023666.11	ENSMUSG00000022945.13	Chaf1b	chr16	protein_coding	chromatin assembly factor 1, subunit B (p60)
chr16	93716925	93739156	-	93716925	93726197	5pMXE	0.33	50	50	ENSMUST00000177648.8	ENSMUSG00000047109.14	Cldn14	chr16	protein_coding	claudin 14
chr16	93716925	93726257	-	93716925	93726197	A5SS	0.33	50	50	ENSMUST00000177648.8	ENSMUSG00000047109.14	Cldn14	chr16	protein_coding	claudin 14
chr16	93716925	93739156	-	93716925	93726257	5pMXE	0.33	50	50	ENSMUST00000169391.8	ENSMUSG00000047109.14	Cldn14	chr16	protein_coding	claudin 14
chr16	93732869	93739156	-	93716925	93739156	A3SS	0.5	50	50	ENSMUST00000050962.5	ENSMUSG00000047109.14	Cldn14	chr16	protein_coding	claudin 14
chr16	93923630	93924024	+	93923630	93924032	A3SS	0.5	50	50	ENSMUST00000231688.2	ENSMUSG00000062713.9	Sim2	chr16	protein_coding	single-minded family bHLH transcription factor 2
chr16	93926261	93926357	+	93924435	93926357	A5SS	0.5	50	50	ENSMUST00000231688.2	ENSMUSG00000062713.9	Sim2	chr16	protein_coding	single-minded family bHLH transcription factor 2
chr16	94032194	94063451	-	94032194	94046709	5pMXE	0.5	50	50	ENSMUST00000228910.2	ENSMUSG00000040820.17	Hlcs	chr16	protein_coding	holocarboxylase synthetase (biotin-
chr16	93942275	93975747	-	93942275	94031923	A5SS	0.25	50	50	ENSMUST00000228910.2	ENSMUSG00000040820.17	Hlcs	chr16	protein_coding	holocarboxylase synthetase (biotin-
chr16	93942275	94006397	-	93942275	94031923	A5SS	0.25	50	50	ENSMUST00000228910.2	ENSMUSG00000040820.17	Hlcs	chr16	protein_coding	holocarboxylase synthetase (biotin-
chr16	93942275	94023901	-	93942275	94031923	A5SS	0.25	50	50	ENSMUST00000228910.2	ENSMUSG00000040820.17	Hlcs	chr16	protein_coding	holocarboxylase synthetase (biotin-
chr16	94088785	94090922	-	94088785	94114377	A5SS	0.5	50	50	ENSMUST00000163193.9	ENSMUSG00000040820.17	Hlcs	chr16	protein_coding	holocarboxylase synthetase (biotin-
chr16	93942275	94023901	-	93942275	94006397	5pMXE	0.25	50	50	ENSMUST00000227447.2	ENSMUSG00000040820.17	Hlcs	chr16	protein_coding	holocarboxylase synthetase (biotin-
chr16	93942275	93975747	-	93942275	94006397	A5SS	0.25	50	50	ENSMUST00000227447.2	ENSMUSG00000040820.17	Hlcs	chr16	protein_coding	holocarboxylase synthetase (biotin-
chr16	93942275	94023901	-	93942275	93975747	5pMXE	0.25	50	50	ENSMUST00000227618.2	ENSMUSG00000040820.17	Hlcs	chr16	protein_coding	holocarboxylase synthetase (biotin-
chr16	94165646	94166214	-	94160033	94166214	A3SS	0.5	50	50	ENSMUST00000113917.8	ENSMUSG00000022940.18	Pigp	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class P
chr16	94171051	94171600	-	94171051	94171225	5pMXE	0.2	50	50	ENSMUST00000113910.8	ENSMUSG00000022940.18	Pigp	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class P
chr16	94171051	94171754	-	94171051	94171225	5pMXE	0.2	50	50	ENSMUST00000113910.8	ENSMUSG00000022940.18	Pigp	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class P
chr16	94171051	94172603	-	94171051	94171225	5pMXE	0.2	50	50	ENSMUST00000113910.8	ENSMUSG00000022940.18	Pigp	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class P
chr16	94171051	94171464	-	94171051	94171225	A5SS	0.2	50	50	ENSMUST00000113910.8	ENSMUSG00000022940.18	Pigp	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class P
chr16	94171051	94171600	-	94171051	94171464	5pMXE	0.2	50	50	ENSMUST00000113906.9	ENSMUSG00000022940.18	Pigp	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class P
chr16	94171051	94171754	-	94171051	94171464	5pMXE	0.2	50	50	ENSMUST00000113906.9	ENSMUSG00000022940.18	Pigp	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class P
chr16	94171051	94172603	-	94171051	94171464	5pMXE	0.2	50	50	ENSMUST00000113906.9	ENSMUSG00000022940.18	Pigp	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class P
chr16	94171051	94172603	-	94171051	94171600	5pMXE	0.2	50	50	ENSMUST00000113914.8	ENSMUSG00000022940.18	Pigp	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class P
chr16	94171051	94171754	-	94171051	94171600	A5SS	0.2	50	50	ENSMUST00000113914.8	ENSMUSG00000022940.18	Pigp	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class P
chr16	94171051	94172603	-	94171051	94171754	5pMXE	0.2	50	50	ENSMUST00000113905.8	ENSMUSG00000022940.18	Pigp	chr16	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class P
chr16	94184925	94185643	+	94184925;94185247	94185205;94185643	ES	0.5	50	50	ENSMUST00000117648.9	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94186282	94189124	+	94186282;94188249	94188196;94189124	ES	0.5	50	50	ENSMUST00000117648.9	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94204227	94210543	+	94204227;94209575	94209413;94210543	ES	0.33	50	50	ENSMUST00000117648.9	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94217225	94220257	+	94217225;94219600	94219466;94220257	ES	0.5	50	50	ENSMUST00000117648.9	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94220337	94223086	+	94220337;94221219	94221107;94223086	ES	0.5	50	50	ENSMUST00000117648.9	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94228786	94232647	+	94228786;94230544	94230218;94232647	ES	0.5	50	50	ENSMUST00000117648.9	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94255382	94258180	+	94255382;94257670	94257570;94258180	ES	0.33	50	50	ENSMUST00000117648.9	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94204227;94209760	94209606;94210543	+	94204227;94209575	94209413;94210543	MXE	0.5	100	100	ENSMUST00000117648.9	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94194033	94195194	+	94194033	94204173	A3SS	0.5	50	50	ENSMUST00000117648.9	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94210588	94211731	+	94210588	94211692	A3SS	0.5	50	50	ENSMUST00000117648.9	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94236405	94240047	+	94236405	94240044	A3SS	0.5	50	50	ENSMUST00000117648.9	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94258891	94260577	+	94258891	94260621	A3SS	0.5	50	50	ENSMUST00000117648.9	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94171830	94184771	+	94171720	94184771	A5SS	0.33	50	50	ENSMUST00000117648.9	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94171830	94192874	+	94191146	94192874	A5SS&ES	0.33	50	50	ENSMUST00000117648.9	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94171830	94204173	+	94194033	94204173	A5SS&ES	0.33	50	50	ENSMUST00000117648.9	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94182312	94184771	+	94171720	94184771	A5SS	0.33	50	50	ENSMUST00000117648.9	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94240142	94243330	+	94240208	94243330	A5SS	0.5	50	50	ENSMUST00000117648.9	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94257620	94258180	+	94257670	94258180	A5SS	0.33	50	50	ENSMUST00000117648.9	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94171720	94184771	+	94171720	94204173	A3SS	0.33	50	50	ENSMUST00000149753.8	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94171720	94192874	+	94171720	94204173	A3SS	0.33	50	50	ENSMUST00000149753.8	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94171830	94204173	+	94171720	94204173	A5SS	0.33	50	50	ENSMUST00000149753.8	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94194033	94204173	+	94171720	94204173	A5SS	0.33	50	50	ENSMUST00000149753.8	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94204227	94211692	+	94204227;94210588	94210543;94211692	ES	0.5	50	50	ENSMUST00000150346.8	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94204227;94209760	94209413;94210543	+	94204227	94210543	cassetteExon	0.5	100	100	ENSMUST00000150346.8	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94204227;94209760	94209606;94210543	+	94204227	94210543	cassetteExon	0.5	100	100	ENSMUST00000150346.8	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94171720	94192874	+	94191146	94192874	A5SS&ES	0.33	50	50	ENSMUST00000155692.8	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94182312	94184771	+	94171830	94184771	A5SS	0.33	50	50	ENSMUST00000155692.8	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94171830	94184771	+	94171830	94204173	A3SS	0.33	50	50	ENSMUST00000130960.8	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94171830	94192874	+	94171830	94204173	A3SS	0.33	50	50	ENSMUST00000130960.8	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94204227	94209413	+	94204227	94216808	A3SS	0.2	50	50	ENSMUST00000130960.8	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94204227	94209606	+	94204227	94216808	A3SS	0.2	50	50	ENSMUST00000130960.8	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94204227	94210543	+	94204227	94216808	A3SS	0.2	50	50	ENSMUST00000130960.8	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94204227	94211692	+	94204227	94216808	A3SS	0.2	50	50	ENSMUST00000130960.8	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94212982	94216808	+	94204227	94216808	A5SS	0.5	50	50	ENSMUST00000130960.8	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94217225	94220257	+	94217225	94219466	3pMXE	0.5	50	50	ENSMUST00000139513.9	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94186282	94189124	+	94186282	94188196	3pMXE	0.5	50	50	ENSMUST00000154243.8	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94204227	94209413	+	94204227	94211692	A3SS	0.2	50	50	ENSMUST00000152117.8	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94204227	94209606	+	94204227	94211692	A3SS	0.2	50	50	ENSMUST00000152117.8	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94171830	94184771	+	94171830	94192874	A3SS	0.33	50	50	ENSMUST00000149885.8	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94171720	94192874	+	94171830	94192874	A5SS	0.33	50	50	ENSMUST00000149885.8	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94171720	94184771	+	94171720	94192874	A3SS	0.33	50	50	ENSMUST00000127667.8	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94204227	94211692	+	94204227	94210543	A3SS&ES	0.25	50	50	ENSMUST00000151192.8	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94220337	94223086	+	94220337	94221107	3pMXE	0.5	50	50	ENSMUST00000145883.2	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94228786	94232647	+	94228786	94230218	3pMXE	0.5	50	50	ENSMUST00000231850.2	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94255382;94257620	94257570;94258180	+	94255382	94258180	cassetteExon	0.5	100	100	ENSMUST00000232368.2	ENSMUSG00000040785.20	Ttc3	chr16	protein_coding	tetratricopeptide repeat domain 3
chr16	94306303;94311029	94310965;94311597	-	94306303	94311597	cassetteExon	0.5	100	100	ENSMUST00000023615.7	ENSMUSG00000022898.14	Vps26c	chr16	protein_coding	VPS26 endosomal protein sorting factor C
chr16	94371393	94460356	+	94371393;94412363	94412278;94460356	ES	0.5	50	50	ENSMUST00000119878.8	ENSMUSG00000022897.16	Dyrk1a	chr16	protein_coding	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a
chr16	94460552	94464628	+	94460552	94464601	A3SS	0.5	50	50	ENSMUST00000119878.8	ENSMUSG00000022897.16	Dyrk1a	chr16	protein_coding	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a
chr16	94371835	94412278	+	94371393	94412278	A5SS	0.5	50	50	ENSMUST00000119878.8	ENSMUSG00000022897.16	Dyrk1a	chr16	protein_coding	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a
chr16	94634078;94670993	94670885;94742040	-	94634078	94742040	cassetteExon	0.5	100	100	ENSMUST00000095873.12	ENSMUSG00000043301.17	Kcnj6	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 6
chr16	94625872	94633158	-	94563544	94633158	A3SS	0.5	50	50	ENSMUST00000095873.12	ENSMUSG00000043301.17	Kcnj6	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 6
chr16	94634078	94656593	-	94634078	94742040	A5SS	0.25	50	50	ENSMUST00000095873.12	ENSMUSG00000043301.17	Kcnj6	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 6
chr16	94634078	94657316	-	94634078	94742040	A5SS	0.25	50	50	ENSMUST00000095873.12	ENSMUSG00000043301.17	Kcnj6	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 6
chr16	94634078	94657316	-	94634078;94656697	94656593;94657316	ES	0.5	50	50	ENSMUST00000232562.2	ENSMUSG00000043301.17	Kcnj6	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 6
chr16	94634078	94670885	-	94634078	94657316	5pMXE	0.25	50	50	ENSMUST00000165538.3	ENSMUSG00000043301.17	Kcnj6	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 6
chr16	94667862	94670885	-	94634078	94670885	A3SS	0.5	50	50	ENSMUST00000232128.2	ENSMUSG00000043301.17	Kcnj6	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 6
chr16	94634078	94656593	-	94634078	94670885	A5SS	0.25	50	50	ENSMUST00000232128.2	ENSMUSG00000043301.17	Kcnj6	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 6
chr16	95038759	95156174	-	95038759	95060419	5pMXE	0.5	50	50	ENSMUST00000232091.2	ENSMUSG00000116720.2	Gm31641	chr16	lncRNA	predicted gene, 31641
chr16	95059310	95092670	+	95059310;95059815	95059712;95092670	ES	0.16	50	50	ENSMUST00000113861.8	ENSMUSG00000062609.15	Kcnj15	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 15
chr16	95059815;95088429	95088262;95092670	+	95059815	95092670	cassetteExon	0.5	100	100	ENSMUST00000113861.8	ENSMUSG00000062609.15	Kcnj15	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 15
chr16	95058593	95059061	+	95058593	95059210	A3SS	0.33	50	50	ENSMUST00000113861.8	ENSMUSG00000062609.15	Kcnj15	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 15
chr16	95058593	95059106	+	95058593	95059210	A3SS	0.33	50	50	ENSMUST00000113861.8	ENSMUSG00000062609.15	Kcnj15	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 15
chr16	95059233	95059712	+	95059310	95059712	A5SS	0.5	50	50	ENSMUST00000113861.8	ENSMUSG00000062609.15	Kcnj15	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 15
chr16	95059233	95092670	+	95059815	95092670	A5SS&ES	0.16	50	50	ENSMUST00000113861.8	ENSMUSG00000062609.15	Kcnj15	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 15
chr16	95059233	95096450	+	95092755	95096450	A5SS&ES	0.33	50	50	ENSMUST00000113861.8	ENSMUSG00000062609.15	Kcnj15	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 15
chr16	95080320	95092670	+	95059815	95092670	A5SS	0.16	50	50	ENSMUST00000113861.8	ENSMUSG00000062609.15	Kcnj15	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 15
chr16	95089839	95092670	+	95059815	95092670	A5SS	0.16	50	50	ENSMUST00000113861.8	ENSMUSG00000062609.15	Kcnj15	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 15
chr16	95092767	95096450	+	95092755	95096450	A5SS	0.33	50	50	ENSMUST00000113861.8	ENSMUSG00000062609.15	Kcnj15	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 15
chr16	95059233	95092670	+	95059310	95092670	A5SS	0.16	50	50	ENSMUST00000113854.8	ENSMUSG00000062609.15	Kcnj15	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 15
chr16	95059233	95096450	+	95092767	95096450	A5SS&ES	0.33	50	50	ENSMUST00000113854.8	ENSMUSG00000062609.15	Kcnj15	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 15
chr16	95080320	95092670	+	95059310	95092670	A5SS	0.16	50	50	ENSMUST00000113854.8	ENSMUSG00000062609.15	Kcnj15	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 15
chr16	95088429	95092670	+	95059310	95092670	A5SS	0.16	50	50	ENSMUST00000113854.8	ENSMUSG00000062609.15	Kcnj15	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 15
chr16	95089839	95092670	+	95059310	95092670	A5SS	0.16	50	50	ENSMUST00000113854.8	ENSMUSG00000062609.15	Kcnj15	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 15
chr16	95058593	95059061	+	95058593	95059106	A3SS	0.33	50	50	ENSMUST00000037154.14	ENSMUSG00000062609.15	Kcnj15	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 15
chr16	95059233	95092670	+	95059233;95059815	95059712;95092670	ES	0.16	50	50	ENSMUST00000113855.8	ENSMUSG00000062609.15	Kcnj15	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 15
chr16	95059233;95089839	95089730;95092670	+	95059233;95059815	95059712;95092670	MXE	0.5	100	100	ENSMUST00000113855.8	ENSMUSG00000062609.15	Kcnj15	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 15
chr16	95059310	95092670	+	95059815	95092670	A5SS&ES	0.16	50	50	ENSMUST00000113855.8	ENSMUSG00000062609.15	Kcnj15	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 15
chr16	95059233;95092755	95092670;95096450	+	95059233	95096450	cassetteExon	0.5	100	100	ENSMUST00000125847.2	ENSMUSG00000062609.15	Kcnj15	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 15
chr16	95059233;95092767	95092670;95096450	+	95059233	95096450	cassetteExon	0.5	100	100	ENSMUST00000125847.2	ENSMUSG00000062609.15	Kcnj15	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 15
chr16	95059233	95059712	+	95059233	95096450	A3SS	0.25	50	50	ENSMUST00000125847.2	ENSMUSG00000062609.15	Kcnj15	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 15
chr16	95059233	95089730	+	95059233	95096450	A3SS	0.25	50	50	ENSMUST00000125847.2	ENSMUSG00000062609.15	Kcnj15	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 15
chr16	95059233;95089839	95089730;95092670	+	95059233	95092670	cassetteExon	0.5	100	100	ENSMUST00000134166.8	ENSMUSG00000062609.15	Kcnj15	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 15
chr16	95080320	95092670	+	95059233	95092670	A5SS	0.16	50	50	ENSMUST00000134166.8	ENSMUSG00000062609.15	Kcnj15	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 15
chr16	95088429	95092670	+	95059233	95092670	A5SS	0.16	50	50	ENSMUST00000134166.8	ENSMUSG00000062609.15	Kcnj15	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 15
chr16	95080320	95092670	+	95088429	95092670	A5SS&ES	0.16	50	50	ENSMUST00000140222.8	ENSMUSG00000062609.15	Kcnj15	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 15
chr16	95089839	95092670	+	95088429	95092670	A5SS	0.16	50	50	ENSMUST00000140222.8	ENSMUSG00000062609.15	Kcnj15	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 15
chr16	95080320	95092670	+	95089839	95092670	A5SS&ES	0.16	50	50	ENSMUST00000152516.2	ENSMUSG00000062609.15	Kcnj15	chr16	protein_coding	potassium inwardly-rectifying channel, subfamily J, member 15
chr16	95170237	95178160	-	95170237;95170922	95170854;95178160	ES	0.5	50	50	ENSMUST00000233881.2	ENSMUSG00000040732.21	Erg	chr16	protein_coding	ETS transcription factor
chr16	95170922	95179971	-	95170922;95178231	95178160;95179971	ES	0.33	50	50	ENSMUST00000233881.2	ENSMUSG00000040732.21	Erg	chr16	protein_coding	ETS transcription factor
chr16	95190904	95260087	-	95190904	95210594	A5SS&ES	0.5	50	50	ENSMUST00000233881.2	ENSMUSG00000040732.21	Erg	chr16	protein_coding	ETS transcription factor
chr16	95210811	95260087	-	95210811	95325386	A5SS	0.5	50	50	ENSMUST00000233881.2	ENSMUSG00000040732.21	Erg	chr16	protein_coding	ETS transcription factor
chr16	95170237	95179971	-	95170237;95178231	95178160;95179971	ES	0.33	50	50	ENSMUST00000233664.2	ENSMUSG00000040732.21	Erg	chr16	protein_coding	ETS transcription factor
chr16	95190904	95260087	-	95190904;95210811	95210594;95260087	ES	0.5	50	50	ENSMUST00000233664.2	ENSMUSG00000040732.21	Erg	chr16	protein_coding	ETS transcription factor
chr16	95170237;95170922	95170854;95179971	-	95170237;95178231	95178160;95179971	MXE	0.5	100	100	ENSMUST00000233664.2	ENSMUSG00000040732.21	Erg	chr16	protein_coding	ETS transcription factor
chr16	95170237	95179971	-	95170237;95170922	95170854;95179971	ES	0.33	50	50	ENSMUST00000233269.2	ENSMUSG00000040732.21	Erg	chr16	protein_coding	ETS transcription factor
chr16	95644457	95699184	-	95567218	95699184	A3SS	0.5	50	50	ENSMUST00000233116.2	ENSMUSG00000117232.2	1600002D24Rik	chr16	lncRNA	RIKEN cDNA 1600002D24 gene
chr16	95699355	95699659	-	95699355	95717816	A5SS	0.5	50	50	ENSMUST00000233116.2	ENSMUSG00000117232.2	1600002D24Rik	chr16	lncRNA	RIKEN cDNA 1600002D24 gene
chr16	95633694	95644403	-	95633694;95643483	95643373;95644403	ES	0.5	50	50	ENSMUST00000233770.2	ENSMUSG00000117232.2	1600002D24Rik	chr16	lncRNA	RIKEN cDNA 1600002D24 gene
chr16	95644457	95699184	-	95644457	95646827	5pMXE	0.33	50	50	ENSMUST00000233770.2	ENSMUSG00000117232.2	1600002D24Rik	chr16	lncRNA	RIKEN cDNA 1600002D24 gene
chr16	95644457	95730216	-	95644457	95646827	5pMXE	0.33	50	50	ENSMUST00000233770.2	ENSMUSG00000117232.2	1600002D24Rik	chr16	lncRNA	RIKEN cDNA 1600002D24 gene
chr16	95643273	95643373	-	95633694	95643373	A3SS	0.5	50	50	ENSMUST00000233770.2	ENSMUSG00000117232.2	1600002D24Rik	chr16	lncRNA	RIKEN cDNA 1600002D24 gene
chr16	95644457	95699184	-	95644457	95730216	A5SS	0.33	50	50	ENSMUST00000233375.2	ENSMUSG00000117232.2	1600002D24Rik	chr16	lncRNA	RIKEN cDNA 1600002D24 gene
chr16	95785191	95789160	-	95785191;95788555	95788493;95789160	ES	0.5	50	50	ENSMUST00000023630.16	ENSMUSG00000022913.17	Psmg1	chr16	protein_coding	proteasome (prosome, macropain) assembly chaperone 1
chr16	95789311	95791954	-	95789311;95790798	95790692;95791954	ES	0.5	50	50	ENSMUST00000023630.16	ENSMUSG00000022913.17	Psmg1	chr16	protein_coding	proteasome (prosome, macropain) assembly chaperone 1
chr16	95789311	95791954	-	95789311	95790692	5pMXE	0.5	50	50	ENSMUST00000233134.2	ENSMUSG00000022913.17	Psmg1	chr16	protein_coding	proteasome (prosome, macropain) assembly chaperone 1
chr16	95817460	95820619	-	95817460;95818924	95818781;95820619	ES	0.5	50	50	ENSMUST00000099502.9	ENSMUSG00000022914.18	Brwd1	chr16	protein_coding	bromodomain and WD repeat domain containing 1
chr16	95822541	95824921	-	95822541;95824723	95824603;95824921	ES	0.5	50	50	ENSMUST00000099502.9	ENSMUSG00000022914.18	Brwd1	chr16	protein_coding	bromodomain and WD repeat domain containing 1
chr16	95839185	95844201	-	95839185;95842583	95842452;95844201	ES	0.5	50	50	ENSMUST00000099502.9	ENSMUSG00000022914.18	Brwd1	chr16	protein_coding	bromodomain and WD repeat domain containing 1
chr16	95844294	95847545	-	95844294;95845847	95845664;95847545	ES	0.5	50	50	ENSMUST00000099502.9	ENSMUSG00000022914.18	Brwd1	chr16	protein_coding	bromodomain and WD repeat domain containing 1
chr16	95806330	95812910	-	95811187	95812910	A3SS&ES	0.5	50	50	ENSMUST00000099502.9	ENSMUSG00000022914.18	Brwd1	chr16	protein_coding	bromodomain and WD repeat domain containing 1
chr16	95809414	95809920	-	95804554	95809920	A3SS	0.5	50	50	ENSMUST00000099502.9	ENSMUSG00000022914.18	Brwd1	chr16	protein_coding	bromodomain and WD repeat domain containing 1
chr16	95804554	95805060	-	95804554	95809920	A5SS	0.5	50	50	ENSMUST00000099502.9	ENSMUSG00000022914.18	Brwd1	chr16	protein_coding	bromodomain and WD repeat domain containing 1
chr16	95806330	95809037	-	95806330	95812910	A5SS	0.33	50	50	ENSMUST00000023631.17	ENSMUSG00000022914.18	Brwd1	chr16	protein_coding	bromodomain and WD repeat domain containing 1
chr16	95806330	95809338	-	95806330	95812910	A5SS	0.33	50	50	ENSMUST00000023631.17	ENSMUSG00000022914.18	Brwd1	chr16	protein_coding	bromodomain and WD repeat domain containing 1
chr16	95806330	95809338	-	95806330	95809037	A5SS	0.5	50	50	ENSMUST00000232993.2	ENSMUSG00000022914.18	Brwd1	chr16	protein_coding	bromodomain and WD repeat domain containing 1
chr16	95817460	95820619	-	95817460	95818781	5pMXE	0.5	50	50	ENSMUST00000232801.2	ENSMUSG00000022914.18	Brwd1	chr16	protein_coding	bromodomain and WD repeat domain containing 1
chr16	95899876;95903471	95903322;95913976	+	95899876	95913976	cassetteExon	0.5	100	100	ENSMUST00000232779.2	ENSMUSG00000117270.2	Gm49953	chr16	lncRNA	predicted gene, 49953
chr16	95899876;95908297	95908151;95913976	+	95899876	95913976	cassetteExon	0.5	100	100	ENSMUST00000232779.2	ENSMUSG00000117270.2	Gm49953	chr16	lncRNA	predicted gene, 49953
chr16	95899876	95913971	+	95899876	95913976	A3SS	0.25	50	50	ENSMUST00000232779.2	ENSMUSG00000117270.2	Gm49953	chr16	lncRNA	predicted gene, 49953
chr16	95899557	95899800	+	95898508	95899800	A5SS	0.5	50	50	ENSMUST00000232779.2	ENSMUSG00000117270.2	Gm49953	chr16	lncRNA	predicted gene, 49953
chr16	95914870	95915604	+	95915101	95915604	A5SS	0.33	50	50	ENSMUST00000232779.2	ENSMUSG00000117270.2	Gm49953	chr16	lncRNA	predicted gene, 49953
chr16	95915122	95915604	+	95915101	95915604	A5SS	0.33	50	50	ENSMUST00000232779.2	ENSMUSG00000117270.2	Gm49953	chr16	lncRNA	predicted gene, 49953
chr16	95899876	95903322	+	95899876	95913971	A3SS	0.25	50	50	ENSMUST00000233834.2	ENSMUSG00000117270.2	Gm49953	chr16	lncRNA	predicted gene, 49953
chr16	95899876	95908151	+	95899876	95913971	A3SS	0.25	50	50	ENSMUST00000233834.2	ENSMUSG00000117270.2	Gm49953	chr16	lncRNA	predicted gene, 49953
chr16	95914870	95915604	+	95915122	95915604	A5SS	0.33	50	50	ENSMUST00000233834.2	ENSMUSG00000117270.2	Gm49953	chr16	lncRNA	predicted gene, 49953
chr16	95899876;95903471	95903322;95913976	+	95899876;95908297	95908151;95913976	MXE	0.5	100	100	ENSMUST00000233380.2	ENSMUSG00000117270.2	Gm49953	chr16	lncRNA	predicted gene, 49953
chr16	95899876	95913976	+	95908297	95913976	A5SS&ES	0.33	50	50	ENSMUST00000233125.2	ENSMUSG00000117270.2	Gm49953	chr16	lncRNA	predicted gene, 49953
chr16	95903471	95913976	+	95908297	95913976	A5SS&ES	0.33	50	50	ENSMUST00000233125.2	ENSMUSG00000117270.2	Gm49953	chr16	lncRNA	predicted gene, 49953
chr16	95928403	95928632	-	95928403;95928540	95928511;95928632	ES	0.5	50	50	ENSMUST00000050884.16	ENSMUSG00000040681.17	Hmgn1	chr16	protein_coding	high mobility group nucleosomal binding domain 1
chr16	95946778	95953013	+	95946778	95946856	3pMXE	0.5	50	50	ENSMUST00000233805.2	ENSMUSG00000023147.18	Get1	chr16	protein_coding	guided entry of tail-anchored proteins factor 1
chr16	95953178	95955281	+	95953178;95954238	95954171;95955281	ES	0.33	50	50	ENSMUST00000233227.2	ENSMUSG00000023147.18	Get1	chr16	protein_coding	guided entry of tail-anchored proteins factor 1
chr16	95946778;95946965	95946856;95953013	+	95946778	95953013	cassetteExon	0.5	100	100	ENSMUST00000233227.2	ENSMUSG00000023147.18	Get1	chr16	protein_coding	guided entry of tail-anchored proteins factor 1
chr16	95954238;95954962	95954859;95955281	+	95954238	95955281	cassetteExon	0.5	100	100	ENSMUST00000233227.2	ENSMUSG00000023147.18	Get1	chr16	protein_coding	guided entry of tail-anchored proteins factor 1
chr16	95946778	95953013	+	95946965	95953013	A5SS	0.5	50	50	ENSMUST00000232832.2	ENSMUSG00000023147.18	Get1	chr16	protein_coding	guided entry of tail-anchored proteins factor 1
chr16	95953178	95957079	+	95953178;95955395	95955281;95957079	ES	0.5	50	50	ENSMUST00000233566.2	ENSMUSG00000023147.18	Get1	chr16	protein_coding	guided entry of tail-anchored proteins factor 1
chr16	95954962	95955281	+	95953178	95955281	A5SS	0.33	50	50	ENSMUST00000233566.2	ENSMUSG00000023147.18	Get1	chr16	protein_coding	guided entry of tail-anchored proteins factor 1
chr16	95953178	95954171	+	95953178	95957079	A3SS	0.33	50	50	ENSMUST00000233273.2	ENSMUSG00000023147.18	Get1	chr16	protein_coding	guided entry of tail-anchored proteins factor 1
chr16	95987129;95991429	95991394;95993388	-	95987129	95993388	cassetteExon	0.5	100	100	ENSMUST00000113804.8	ENSMUSG00000045275.18	Lca5l	chr16	protein_coding	Leber congenital amaurosis 5-like
chr16	95961064	95962531	-	95961067	95962531	A3SS	0.5	50	50	ENSMUST00000113804.8	ENSMUSG00000045275.18	Lca5l	chr16	protein_coding	Leber congenital amaurosis 5-like
chr16	95985314	95986971	-	95981320	95986971	A3SS	0.5	50	50	ENSMUST00000113804.8	ENSMUSG00000045275.18	Lca5l	chr16	protein_coding	Leber congenital amaurosis 5-like
chr16	95985360	95993388	-	95987129	95993388	A3SS&ES	0.33	50	50	ENSMUST00000113804.8	ENSMUSG00000045275.18	Lca5l	chr16	protein_coding	Leber congenital amaurosis 5-like
chr16	95985360	95993388	-	95991429	95993388	A3SS&ES	0.33	50	50	ENSMUST00000154445.4	ENSMUSG00000045275.18	Lca5l	chr16	protein_coding	Leber congenital amaurosis 5-like
chr16	96015293	96021699	+	96015293;96020760	96020689;96021699	ES	0.33	50	50	ENSMUST00000048770.16	ENSMUSG00000040666.20	Sh3bgr	chr16	protein_coding	SH3-binding domain glutamic acid-rich protein
chr16	96025081	96029723	+	96025081;96025791	96025674;96029723	ES	0.33	50	50	ENSMUST00000048770.16	ENSMUSG00000040666.20	Sh3bgr	chr16	protein_coding	SH3-binding domain glutamic acid-rich protein
chr16	96021791	96025677	+	96021791	96025001	A3SS&ES	0.33	50	50	ENSMUST00000048770.16	ENSMUSG00000040666.20	Sh3bgr	chr16	protein_coding	SH3-binding domain glutamic acid-rich protein
chr16	96007139	96007682	+	96001948	96007682	A5SS	0.5	50	50	ENSMUST00000048770.16	ENSMUSG00000040666.20	Sh3bgr	chr16	protein_coding	SH3-binding domain glutamic acid-rich protein
chr16	96025081	96029723	+	96025081	96025674	3pMXE	0.5	50	50	ENSMUST00000171181.9	ENSMUSG00000040666.20	Sh3bgr	chr16	protein_coding	SH3-binding domain glutamic acid-rich protein
chr16	96015293;96025081	96025001;96029723	+	96015293;96025791	96020689;96029723	MXE	0.5	100	100	ENSMUST00000233818.2	ENSMUSG00000040666.20	Sh3bgr	chr16	protein_coding	SH3-binding domain glutamic acid-rich protein
chr16	96021791;96025081	96025001;96029723	+	96021791;96025791	96025677;96029723	MXE	0.5	100	100	ENSMUST00000233818.2	ENSMUSG00000040666.20	Sh3bgr	chr16	protein_coding	SH3-binding domain glutamic acid-rich protein
chr16	96007867	96021699	+	96007867	96015213	A3SS&ES	0.5	50	50	ENSMUST00000233818.2	ENSMUSG00000040666.20	Sh3bgr	chr16	protein_coding	SH3-binding domain glutamic acid-rich protein
chr16	96015293	96021699	+	96015293	96020689	A3SS&ES	0.33	50	50	ENSMUST00000233818.2	ENSMUSG00000040666.20	Sh3bgr	chr16	protein_coding	SH3-binding domain glutamic acid-rich protein
chr16	96007867	96021699	+	96007867;96015293	96015213;96021699	ES	0.33	50	50	ENSMUST00000166952.8	ENSMUSG00000040666.20	Sh3bgr	chr16	protein_coding	SH3-binding domain glutamic acid-rich protein
chr16	96015293	96025001	+	96015293	96021699	3pMXE	0.33	50	50	ENSMUST00000166952.8	ENSMUSG00000040666.20	Sh3bgr	chr16	protein_coding	SH3-binding domain glutamic acid-rich protein
chr16	96007867;96021791	96021699;96025001	+	96007867;96015293	96015213;96025001	MXE	0.5	100	100	ENSMUST00000132424.9	ENSMUSG00000040666.20	Sh3bgr	chr16	protein_coding	SH3-binding domain glutamic acid-rich protein
chr16	96015293;96021791	96021699;96025001	+	96015293	96025001	cassetteExon	0.5	100	100	ENSMUST00000132424.9	ENSMUSG00000040666.20	Sh3bgr	chr16	protein_coding	SH3-binding domain glutamic acid-rich protein
chr16	96015293	96020689	+	96015293	96025001	A3SS	0.33	50	50	ENSMUST00000132424.9	ENSMUSG00000040666.20	Sh3bgr	chr16	protein_coding	SH3-binding domain glutamic acid-rich protein
chr16	96020760	96021699	+	96007867	96021699	A5SS	0.33	50	50	ENSMUST00000157060.8	ENSMUSG00000040666.20	Sh3bgr	chr16	protein_coding	SH3-binding domain glutamic acid-rich protein
chr16	96021791;96025081	96025001;96029723	+	96021791	96029723	cassetteExon	0.5	100	100	ENSMUST00000145069.3	ENSMUSG00000040666.20	Sh3bgr	chr16	protein_coding	SH3-binding domain glutamic acid-rich protein
chr16	96021791;96025791	96025677;96029723	+	96021791	96029723	cassetteExon	0.5	100	100	ENSMUST00000145069.3	ENSMUSG00000040666.20	Sh3bgr	chr16	protein_coding	SH3-binding domain glutamic acid-rich protein
chr16	96021791	96029723	+	96025081	96029723	5pMXE	0.33	50	50	ENSMUST00000233577.2	ENSMUSG00000040666.20	Sh3bgr	chr16	protein_coding	SH3-binding domain glutamic acid-rich protein
chr16	96075097	96114799	+	96037766	96114799	A5SS	0.25	50	50	ENSMUST00000113800.9	ENSMUSG00000074892.10	B3galt5	chr16	protein_coding	UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5
chr16	96082278	96114799	+	96037766	96114799	A5SS	0.25	50	50	ENSMUST00000113800.9	ENSMUSG00000074892.10	B3galt5	chr16	protein_coding	UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5
chr16	96098563	96114799	+	96037766	96114799	A5SS	0.25	50	50	ENSMUST00000113800.9	ENSMUSG00000074892.10	B3galt5	chr16	protein_coding	UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5
chr16	96075097;96098563	96098392;96114799	+	96075097	96114799	cassetteExon	0.5	100	100	ENSMUST00000153586.2	ENSMUSG00000074892.10	B3galt5	chr16	protein_coding	UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5
chr16	96082278	96114799	+	96075097	96114799	A5SS	0.25	50	50	ENSMUST00000153586.2	ENSMUSG00000074892.10	B3galt5	chr16	protein_coding	UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5
chr16	96082278	96114799	+	96098563	96114799	A5SS&ES	0.33	50	50	ENSMUST00000134058.8	ENSMUSG00000074892.10	B3galt5	chr16	protein_coding	UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5
chr16	96174347	96187686	+	96174347;96179584	96179285;96187686	ES	0.5	50	50	ENSMUST00000113794.8	ENSMUSG00000000159.17	Igsf5	chr16	protein_coding	immunoglobulin superfamily, member 5
chr16	96199164	96295016	+	96199164	96222935	3pMXE	0.25	50	50	ENSMUST00000113794.8	ENSMUSG00000000159.17	Igsf5	chr16	protein_coding	immunoglobulin superfamily, member 5
chr16	96199164;96208784	96208746;96222935	+	96199164	96222935	cassetteExon	0.5	100	100	ENSMUST00000113794.8	ENSMUSG00000000159.17	Igsf5	chr16	protein_coding	immunoglobulin superfamily, member 5
chr16	96199164	96204466	+	96199164	96222935	A3SS	0.25	50	50	ENSMUST00000113794.8	ENSMUSG00000000159.17	Igsf5	chr16	protein_coding	immunoglobulin superfamily, member 5
chr16	96187647	96192220	+	96187826	96192220	A5SS&ES	0.5	50	50	ENSMUST00000113794.8	ENSMUSG00000000159.17	Igsf5	chr16	protein_coding	immunoglobulin superfamily, member 5
chr16	96199164	96208746	+	96199164	96204466	3pMXE	0.25	50	50	ENSMUST00000000163.13	ENSMUSG00000000159.17	Igsf5	chr16	protein_coding	immunoglobulin superfamily, member 5
chr16	96199164	96295016	+	96199164	96204466	3pMXE	0.25	50	50	ENSMUST00000000163.13	ENSMUSG00000000159.17	Igsf5	chr16	protein_coding	immunoglobulin superfamily, member 5
chr16	96295067;96298599	96298426;96326590	+	96295067	96326590	cassetteExon	0.5	100	100	ENSMUST00000113795.8	ENSMUSG00000117081.2	Gm49948	chr16	protein_coding	predicted gene, 49948
chr16	96295067;96298606	96298426;96326590	+	96295067	96326590	cassetteExon	0.5	100	100	ENSMUST00000113795.8	ENSMUSG00000117081.2	Gm49948	chr16	protein_coding	predicted gene, 49948
chr16	96295067;96298599	96298430;96326590	+	96295067	96326590	cassetteExon	0.5	100	100	ENSMUST00000113795.8	ENSMUSG00000117081.2	Gm49948	chr16	protein_coding	predicted gene, 49948
chr16	96295067;96298606	96298430;96326590	+	96295067	96326590	cassetteExon	0.5	100	100	ENSMUST00000113795.8	ENSMUSG00000117081.2	Gm49948	chr16	protein_coding	predicted gene, 49948
chr16	96199164	96208746	+	96199164	96295016	A3SS	0.25	50	50	ENSMUST00000113795.8	ENSMUSG00000117081.2	Gm49948	chr16	protein_coding	predicted gene, 49948
chr16	96268990	96295016	+	96199164	96295016	A5SS	0.5	50	50	ENSMUST00000113795.8	ENSMUSG00000117081.2	Gm49948	chr16	protein_coding	predicted gene, 49948
chr16	96301023	96326590	+	96295067	96326590	A5SS	0.25	50	50	ENSMUST00000113795.8	ENSMUSG00000117081.2	Gm49948	chr16	protein_coding	predicted gene, 49948
chr16	96227425	96227929	-	96227468	96227929	A3SS	0.5	50	50	ENSMUST00000000161.14	ENSMUSG00000000157.17	Itgb2l	chr16	protein_coding	integrin beta 2-like
chr16	96295067	96298430	+	96295067	96298426	A3SS	0.33	50	50	ENSMUST00000232906.2	ENSMUSG00000090223.3	Pcp4	chr16	protein_coding	Purkinje cell protein 4
chr16	96298599	96326590	+	96298606	96326590	A5SS	0.25	50	50	ENSMUST00000232906.2	ENSMUSG00000090223.3	Pcp4	chr16	protein_coding	Purkinje cell protein 4
chr16	96301023	96326590	+	96298606	96326590	A5SS	0.25	50	50	ENSMUST00000232906.2	ENSMUSG00000090223.3	Pcp4	chr16	protein_coding	Purkinje cell protein 4
chr16	96301023	96326590	+	96298599	96326590	A5SS	0.25	50	50	ENSMUST00000233816.2	ENSMUSG00000090223.3	Pcp4	chr16	protein_coding	Purkinje cell protein 4
chr16	96394614;96399056	96398994;96409236	-	96394614	96409236	cassetteExon	0.5	100	100	ENSMUST00000056102.9	ENSMUSG00000050272.11	Dscam	chr16	protein_coding	DS cell adhesion molecule
chr16	96719977	96720719	+	96719977	96720756	A3SS	0.5	50	50	ENSMUST00000232934.2	ENSMUSG00000117324.2	Gm32432	chr16	lncRNA	predicted gene, 32432
chr16	97213378	97214549	+	97213386	97214549	A5SS	0.5	50	50	ENSMUST00000047275.8	ENSMUSG00000040605.8	Bace2	chr16	protein_coding	beta-site APP-cleaving enzyme 2
chr16	97216380	97237842	+	97216380	97223050	3pMXE	0.5	50	50	ENSMUST00000231783.2	ENSMUSG00000040605.8	Bace2	chr16	protein_coding	beta-site APP-cleaving enzyme 2
chr16	97225858	97237842	+	97216380	97237842	A5SS	0.5	50	50	ENSMUST00000231892.2	ENSMUSG00000040605.8	Bace2	chr16	protein_coding	beta-site APP-cleaving enzyme 2
chr16	97252751	97255225	-	97252751;97254051	97253973;97255225	ES	0.5	50	50	ENSMUST00000135184.8	ENSMUSG00000000386.17	Mx1	chr16	polymorphic_pseudogene	MX dynamin-like GTPase 1
chr16	97262146	97264081	-	97262146;97263970	97263899;97264081	ES	0.5	50	50	ENSMUST00000135184.8	ENSMUSG00000000386.17	Mx1	chr16	polymorphic_pseudogene	MX dynamin-like GTPase 1
chr16	97256428;97256843	97256689;97257422	-	97256428	97257422	cassetteExon	0.5	100	100	ENSMUST00000135184.8	ENSMUSG00000000386.17	Mx1	chr16	polymorphic_pseudogene	MX dynamin-like GTPase 1
chr16	97258669	97261956	-	97260408	97261956	A3SS&ES	0.33	50	50	ENSMUST00000135184.8	ENSMUSG00000000386.17	Mx1	chr16	polymorphic_pseudogene	MX dynamin-like GTPase 1
chr16	97258669	97261956	-	97258692	97261956	A3SS	0.33	50	50	ENSMUST00000155233.8	ENSMUSG00000000386.17	Mx1	chr16	polymorphic_pseudogene	MX dynamin-like GTPase 1
chr16	97260408	97261956	-	97258692	97261956	A3SS	0.33	50	50	ENSMUST00000155233.8	ENSMUSG00000000386.17	Mx1	chr16	polymorphic_pseudogene	MX dynamin-like GTPase 1
chr16	97258692	97259270	-	97258692	97261956	A5SS	0.5	50	50	ENSMUST00000155233.8	ENSMUSG00000000386.17	Mx1	chr16	polymorphic_pseudogene	MX dynamin-like GTPase 1
chr16	97252751;97255423	97255225;97256290	-	97252751	97256290	cassetteExon	0.5	100	100	ENSMUST00000113768.8	ENSMUSG00000000386.17	Mx1	chr16	polymorphic_pseudogene	MX dynamin-like GTPase 1
chr16	97252751	97253973	-	97252751	97256290	A5SS	0.25	50	50	ENSMUST00000113768.8	ENSMUSG00000000386.17	Mx1	chr16	polymorphic_pseudogene	MX dynamin-like GTPase 1
chr16	97262146	97264081	-	97262146	97263899	A5SS	0.5	50	50	ENSMUST00000113768.8	ENSMUSG00000000386.17	Mx1	chr16	polymorphic_pseudogene	MX dynamin-like GTPase 1
chr16	97252751	97255225	-	97254051	97255225	A3SS&ES	0.5	50	50	ENSMUST00000023655.13	ENSMUSG00000000386.17	Mx1	chr16	polymorphic_pseudogene	MX dynamin-like GTPase 1
chr16	97252751	97256290	-	97255423	97256290	A3SS&ES	0.5	50	50	ENSMUST00000023655.13	ENSMUSG00000000386.17	Mx1	chr16	polymorphic_pseudogene	MX dynamin-like GTPase 1
chr16	97252751	97257422	-	97256843	97257422	A3SS&ES	0.33	50	50	ENSMUST00000023655.13	ENSMUSG00000000386.17	Mx1	chr16	polymorphic_pseudogene	MX dynamin-like GTPase 1
chr16	97252751;97256428	97256290;97257422	-	97252751	97257422	cassetteExon	0.5	100	100	ENSMUST00000232193.3	ENSMUSG00000000386.17	Mx1	chr16	polymorphic_pseudogene	MX dynamin-like GTPase 1
chr16	97252751	97253973	-	97252751	97257422	A5SS	0.25	50	50	ENSMUST00000232193.3	ENSMUSG00000000386.17	Mx1	chr16	polymorphic_pseudogene	MX dynamin-like GTPase 1
chr16	97252751	97255225	-	97252751	97257422	A5SS	0.25	50	50	ENSMUST00000232193.3	ENSMUSG00000000386.17	Mx1	chr16	polymorphic_pseudogene	MX dynamin-like GTPase 1
chr16	97252751	97255225	-	97252751	97253973	5pMXE	0.25	50	50	ENSMUST00000231995.2	ENSMUSG00000000386.17	Mx1	chr16	polymorphic_pseudogene	MX dynamin-like GTPase 1
chr16	97252751	97257422	-	97256428	97257422	3pMXE	0.33	50	50	ENSMUST00000231461.2	ENSMUSG00000000386.17	Mx1	chr16	polymorphic_pseudogene	MX dynamin-like GTPase 1
chr16	97279607	97302060	-	97279607;97283110	97282987;97302060	ES	0.5	50	50	ENSMUST00000049721.9	ENSMUSG00000022938.9	Fam3b	chr16	protein_coding	family with sequence similarity 3, member B
chr16	97283110	97306023	-	97283110;97302203	97302060;97306023	ES	0.5	50	50	ENSMUST00000049721.9	ENSMUSG00000022938.9	Fam3b	chr16	protein_coding	family with sequence similarity 3, member B
chr16	97302203	97313658	-	97302203	97306023	5pMXE	0.33	50	50	ENSMUST00000049721.9	ENSMUSG00000022938.9	Fam3b	chr16	protein_coding	family with sequence similarity 3, member B
chr16	97302203	97314805	-	97302203	97306023	5pMXE	0.33	50	50	ENSMUST00000049721.9	ENSMUSG00000022938.9	Fam3b	chr16	protein_coding	family with sequence similarity 3, member B
chr16	97302203	97313658	-	97302203	97314805	A5SS	0.33	50	50	ENSMUST00000231641.2	ENSMUSG00000022938.9	Fam3b	chr16	protein_coding	family with sequence similarity 3, member B
chr16	97279607;97302203	97302060;97306023	-	97279607;97283110	97282987;97306023	MXE	0.5	100	100	ENSMUST00000231999.2	ENSMUSG00000022938.9	Fam3b	chr16	protein_coding	family with sequence similarity 3, member B
chr16	97283110	97306023	-	97283110	97302060	A5SS&ES	0.5	50	50	ENSMUST00000231414.2	ENSMUSG00000022938.9	Fam3b	chr16	protein_coding	family with sequence similarity 3, member B
chr16	97337373	97339818	+	97337307	97339818	A5SS	0.5	50	50	ENSMUST00000190447.8	ENSMUSG00000023341.16	Mx2	chr16	polymorphic_pseudogene	MX dynamin-like GTPase 2
chr16	97351986	97352097	+	97348736	97352097	A5SS	0.5	50	50	ENSMUST00000190447.8	ENSMUSG00000023341.16	Mx2	chr16	polymorphic_pseudogene	MX dynamin-like GTPase 2
chr16	97377526;97378469	97378319;97379730	-	97377526	97379730	cassetteExon	0.5	100	100	ENSMUST00000000395.8	ENSMUSG00000000385.9	Tmprss2	chr16	protein_coding	transmembrane protease, serine 2
chr16	97400522	97411837	-	97400522	97412219	A5SS	0.5	50	50	ENSMUST00000000395.8	ENSMUSG00000000385.9	Tmprss2	chr16	protein_coding	transmembrane protease, serine 2
chr16	97623210	97636778	-	97623210;97630912	97630811;97636778	ES	0.5	50	50	ENSMUST00000095849.10	ENSMUSG00000014039.19	Prdm15	chr16	protein_coding	PR domain containing 15
chr16	97641168	97652969	-	97641168	97652251	5pMXE	0.25	50	50	ENSMUST00000095849.10	ENSMUSG00000014039.19	Prdm15	chr16	protein_coding	PR domain containing 15
chr16	97641168	97652973	-	97641168	97652251	5pMXE	0.25	50	50	ENSMUST00000095849.10	ENSMUSG00000014039.19	Prdm15	chr16	protein_coding	PR domain containing 15
chr16	97613891	97617306	-	97613925	97617306	A3SS	0.5	50	50	ENSMUST00000095849.10	ENSMUSG00000014039.19	Prdm15	chr16	protein_coding	PR domain containing 15
chr16	97600837	97604616	-	97600837	97604910	A5SS	0.5	50	50	ENSMUST00000095849.10	ENSMUSG00000014039.19	Prdm15	chr16	protein_coding	PR domain containing 15
chr16	97617830	97618064	-	97617830	97618049	A5SS	0.5	50	50	ENSMUST00000095849.10	ENSMUSG00000014039.19	Prdm15	chr16	protein_coding	PR domain containing 15
chr16	97641168	97650005	-	97641168	97652251	A5SS	0.25	50	50	ENSMUST00000095849.10	ENSMUSG00000014039.19	Prdm15	chr16	protein_coding	PR domain containing 15
chr16	97641168	97650005	-	97641168	97652973	A5SS	0.25	50	50	ENSMUST00000121584.8	ENSMUSG00000014039.19	Prdm15	chr16	protein_coding	PR domain containing 15
chr16	97641168	97652969	-	97641168	97652973	A5SS	0.25	50	50	ENSMUST00000121584.8	ENSMUSG00000014039.19	Prdm15	chr16	protein_coding	PR domain containing 15
chr16	97641168	97650005	-	97641168	97652969	A5SS	0.25	50	50	ENSMUST00000142295.8	ENSMUSG00000014039.19	Prdm15	chr16	protein_coding	PR domain containing 15
chr16	97623210	97636778	-	97623210	97630811	5pMXE	0.5	50	50	ENSMUST00000128917.2	ENSMUSG00000014039.19	Prdm15	chr16	protein_coding	PR domain containing 15
chr16	97713904	97763713	-	97713904	97723255	5pMXE	0.33	50	50	ENSMUST00000170757.3	ENSMUSG00000045975.9	C2cd2	chr16	protein_coding	C2 calcium-dependent domain containing 2
chr16	97676442;97676621	97676529;97677420	-	97676442	97677420	cassetteExon	0.5	100	100	ENSMUST00000170757.3	ENSMUSG00000045975.9	C2cd2	chr16	protein_coding	C2 calcium-dependent domain containing 2
chr16	97670101	97671353	-	97670116	97671353	A3SS	0.5	50	50	ENSMUST00000170757.3	ENSMUSG00000045975.9	C2cd2	chr16	protein_coding	C2 calcium-dependent domain containing 2
chr16	97660776	97661536	-	97660776	97669792	A5SS	0.33	50	50	ENSMUST00000170757.3	ENSMUSG00000045975.9	C2cd2	chr16	protein_coding	C2 calcium-dependent domain containing 2
chr16	97660776	97665954	-	97660776	97669792	A5SS	0.33	50	50	ENSMUST00000170757.3	ENSMUSG00000045975.9	C2cd2	chr16	protein_coding	C2 calcium-dependent domain containing 2
chr16	97687410	97691206	-	97687410	97691214	A5SS	0.5	50	50	ENSMUST00000170757.3	ENSMUSG00000045975.9	C2cd2	chr16	protein_coding	C2 calcium-dependent domain containing 2
chr16	97713904	97723531	-	97713904	97723255	A5SS	0.33	50	50	ENSMUST00000170757.3	ENSMUSG00000045975.9	C2cd2	chr16	protein_coding	C2 calcium-dependent domain containing 2
chr16	97660776	97665954	-	97660776	97661536	5pMXE	0.33	50	50	ENSMUST00000232343.2	ENSMUSG00000045975.9	C2cd2	chr16	protein_coding	C2 calcium-dependent domain containing 2
chr16	97744875	97763713	-	97713904	97763713	A3SS	0.33	50	50	ENSMUST00000232165.2	ENSMUSG00000045975.9	C2cd2	chr16	protein_coding	C2 calcium-dependent domain containing 2
chr16	97758100	97763713	-	97713904	97763713	A3SS	0.33	50	50	ENSMUST00000232165.2	ENSMUSG00000045975.9	C2cd2	chr16	protein_coding	C2 calcium-dependent domain containing 2
chr16	97713904	97723531	-	97713904	97763713	A5SS	0.33	50	50	ENSMUST00000232165.2	ENSMUSG00000045975.9	C2cd2	chr16	protein_coding	C2 calcium-dependent domain containing 2
chr16	97758100	97763713	-	97744875	97763713	A3SS	0.33	50	50	ENSMUST00000232010.2	ENSMUSG00000046962.17	Zbtb21	chr16	protein_coding	zinc finger and BTB domain containing 21
chr16	97754293	97763614	-	97754293;97758100	97757958;97763614	ES	0.33	50	50	ENSMUST00000113734.9	ENSMUSG00000046962.17	Zbtb21	chr16	protein_coding	zinc finger and BTB domain containing 21
chr16	97758094	97763614	-	97758100	97763614	A3SS	0.33	50	50	ENSMUST00000113734.9	ENSMUSG00000046962.17	Zbtb21	chr16	protein_coding	zinc finger and BTB domain containing 21
chr16	97758100	97763713	-	97758100	97763614	A5SS	0.5	50	50	ENSMUST00000113734.9	ENSMUSG00000046962.17	Zbtb21	chr16	protein_coding	zinc finger and BTB domain containing 21
chr16	97754293;97758094	97757958;97763614	-	97754293	97763614	cassetteExon	0.5	100	100	ENSMUST00000063605.15	ENSMUSG00000046962.17	Zbtb21	chr16	protein_coding	zinc finger and BTB domain containing 21
chr16	97752069	97754128	-	97752069	97752670	A5SS	0.5	50	50	ENSMUST00000052089.9	ENSMUSG00000046962.17	Zbtb21	chr16	protein_coding	zinc finger and BTB domain containing 21
chr16	97754293	97763614	-	97754293	97757958	A5SS&ES	0.5	50	50	ENSMUST00000231560.2	ENSMUSG00000046962.17	Zbtb21	chr16	protein_coding	zinc finger and BTB domain containing 21
chr16	97796343	97798126	-	97796343	97798448	A5SS	0.5	50	50	ENSMUST00000181465.3	ENSMUSG00000097874.4	C030010L15Rik	chr16	lncRNA	RIKEN cDNA C030010L15 gene
chr16	97809955	97816866	+	97809955;97810204	97810144;97816866	ES	0.33	50	50	ENSMUST00000231936.2	ENSMUSG00000080717.11	B230307C23Rik	chr16	protein_coding	RIKEN cDNA B230307C23 gene
chr16	97810204;97811368	97811319;97816866	+	97810204	97816866	cassetteExon	0.5	100	100	ENSMUST00000231936.2	ENSMUSG00000080717.11	B230307C23Rik	chr16	protein_coding	RIKEN cDNA B230307C23 gene
chr16	97816919	97817042	+	97816919	97832694	A3SS	0.33	50	50	ENSMUST00000231936.2	ENSMUSG00000080717.11	B230307C23Rik	chr16	protein_coding	RIKEN cDNA B230307C23 gene
chr16	97816919	97832443	+	97816919	97832694	A3SS	0.33	50	50	ENSMUST00000231936.2	ENSMUSG00000080717.11	B230307C23Rik	chr16	protein_coding	RIKEN cDNA B230307C23 gene
chr16	97809955	97816866	+	97809955	97810144	3pMXE	0.5	50	50	ENSMUST00000122450.8	ENSMUSG00000080717.11	B230307C23Rik	chr16	protein_coding	RIKEN cDNA B230307C23 gene
chr16	97816919	97832443	+	97816919	97817042	3pMXE	0.33	50	50	ENSMUST00000232278.2	ENSMUSG00000080717.11	B230307C23Rik	chr16	protein_coding	RIKEN cDNA B230307C23 gene
chr16	97811368	97816866	+	97809955	97816866	A5SS	0.33	50	50	ENSMUST00000232278.2	ENSMUSG00000080717.11	B230307C23Rik	chr16	protein_coding	RIKEN cDNA B230307C23 gene
chr16	97869330	97883546	-	97869330	97883090	5pMXE	0.33	50	50	ENSMUST00000232346.2	ENSMUSG00000116673.2	A630089N07Rik	chr16	protein_coding	RIKEN cDNA A630089N07 gene
chr16	97822200	97868955	-	97803022	97868955	A3SS	0.33	50	50	ENSMUST00000232346.2	ENSMUSG00000116673.2	A630089N07Rik	chr16	protein_coding	RIKEN cDNA A630089N07 gene
chr16	97867865	97868955	-	97803022	97868955	A3SS	0.33	50	50	ENSMUST00000232346.2	ENSMUSG00000116673.2	A630089N07Rik	chr16	protein_coding	RIKEN cDNA A630089N07 gene
chr16	97869330	97870511	-	97869330	97883090	A5SS	0.33	50	50	ENSMUST00000232346.2	ENSMUSG00000116673.2	A630089N07Rik	chr16	protein_coding	RIKEN cDNA A630089N07 gene
chr16	97822200;97867865	97867744;97868955	-	97822200	97868955	cassetteExon	0.5	100	100	ENSMUST00000232376.2	ENSMUSG00000116673.2	A630089N07Rik	chr16	protein_coding	RIKEN cDNA A630089N07 gene
chr16	97853395	97867744	-	97822200	97867744	A3SS	0.33	50	50	ENSMUST00000232533.2	ENSMUSG00000116673.2	A630089N07Rik	chr16	protein_coding	RIKEN cDNA A630089N07 gene
chr16	97865438	97867744	-	97822200	97867744	A3SS	0.33	50	50	ENSMUST00000232533.2	ENSMUSG00000116673.2	A630089N07Rik	chr16	protein_coding	RIKEN cDNA A630089N07 gene
chr16	97865438	97867744	-	97853395	97867744	A3SS	0.33	50	50	ENSMUST00000232614.2	ENSMUSG00000116673.2	A630089N07Rik	chr16	protein_coding	RIKEN cDNA A630089N07 gene
chr16	97869330;97870551	97870511;97883546	-	97869330	97883546	cassetteExon	0.5	100	100	ENSMUST00000231268.2	ENSMUSG00000116673.2	A630089N07Rik	chr16	protein_coding	RIKEN cDNA A630089N07 gene
chr16	97822200	97868955	-	97867865	97868955	3pMXE	0.33	50	50	ENSMUST00000231741.2	ENSMUSG00000116673.2	A630089N07Rik	chr16	protein_coding	RIKEN cDNA A630089N07 gene
chr17	3129866	3134243	-	3129866	3131144	A5SS&ES	0.5	50	50	ENSMUST00000142526.9	ENSMUSG00000023795.17	Pisd-ps2	chr17	transcribed_unprocessed_pseudogene	phosphatidylserine decarboxylase, pseudogene 2
chr17	3131309	3134243	-	3131309	3134231	A5SS	0.5	50	50	ENSMUST00000142526.9	ENSMUSG00000023795.17	Pisd-ps2	chr17	transcribed_unprocessed_pseudogene	phosphatidylserine decarboxylase, pseudogene 2
chr17	3129866	3134243	-	3129866;3131309	3131144;3134243	ES	0.5	50	50	ENSMUST00000184936.8	ENSMUSG00000023795.17	Pisd-ps2	chr17	transcribed_unprocessed_pseudogene	phosphatidylserine decarboxylase, pseudogene 2
chr17	3198855	3209438	+	3198855	3201060	3pMXE	0.5	50	50	ENSMUST00000232079.2	ENSMUSG00000046201.10	Scaf8	chr17	protein_coding	SR-related CTD-associated factor 8
chr17	3165693;3172389	3172328;3195350	+	3165693	3195350	cassetteExon	0.5	100	100	ENSMUST00000232079.2	ENSMUSG00000046201.10	Scaf8	chr17	protein_coding	SR-related CTD-associated factor 8
chr17	3281591	3341825	+	3281591	3308013	3pMXE	0.5	50	50	ENSMUST00000231685.2	ENSMUSG00000116858.2	Gm49797	chr17	lncRNA	predicted gene, 49797
chr17	3281591	3341825	+	3278783	3341825	A5SS	0.5	50	50	ENSMUST00000231987.2	ENSMUSG00000116858.2	Gm49797	chr17	lncRNA	predicted gene, 49797
chr17	3326187	3333486	-	3326187	3333370	5pMXE	0.5	50	50	ENSMUST00000232068.2	ENSMUSG00000116874.2	Gm34035	chr17	lncRNA	predicted gene, 34035
chr17	3447619	3462907	+	3377001	3462907	A5SS	0.5	50	50	ENSMUST00000169838.9	ENSMUSG00000023800.16	Tiam2	chr17	protein_coding	T cell lymphoma invasion and metastasis 2
chr17	3532890	3553156	+	3527553	3553156	A5SS	0.25	50	50	ENSMUST00000169838.9	ENSMUSG00000023800.16	Tiam2	chr17	protein_coding	T cell lymphoma invasion and metastasis 2
chr17	3534364	3553156	+	3527553	3553156	A5SS	0.25	50	50	ENSMUST00000169838.9	ENSMUSG00000023800.16	Tiam2	chr17	protein_coding	T cell lymphoma invasion and metastasis 2
chr17	3541012	3553156	+	3527553	3553156	A5SS	0.25	50	50	ENSMUST00000169838.9	ENSMUSG00000023800.16	Tiam2	chr17	protein_coding	T cell lymphoma invasion and metastasis 2
chr17	3534364	3553156	+	3532890	3553156	A5SS	0.25	50	50	ENSMUST00000227604.2	ENSMUSG00000023800.16	Tiam2	chr17	protein_coding	T cell lymphoma invasion and metastasis 2
chr17	3541012	3553156	+	3532890	3553156	A5SS	0.25	50	50	ENSMUST00000227604.2	ENSMUSG00000023800.16	Tiam2	chr17	protein_coding	T cell lymphoma invasion and metastasis 2
chr17	3541012	3553156	+	3534364	3553156	A5SS	0.25	50	50	ENSMUST00000226913.2	ENSMUSG00000023800.16	Tiam2	chr17	protein_coding	T cell lymphoma invasion and metastasis 2
chr17	3595966;3603864	3603771;3605207	-	3595966	3605207	cassetteExon	0.5	100	100	ENSMUST00000041003.8	ENSMUSG00000036983.8	Tfb1m	chr17	protein_coding	transcription factor B1, mitochondrial
chr17	3602613	3605207	-	3595966	3605207	A3SS	0.33	50	50	ENSMUST00000041003.8	ENSMUSG00000036983.8	Tfb1m	chr17	protein_coding	transcription factor B1, mitochondrial
chr17	3605358	3607822	-	3605358	3607856	A5SS	0.5	50	50	ENSMUST00000041003.8	ENSMUSG00000036983.8	Tfb1m	chr17	protein_coding	transcription factor B1, mitochondrial
chr17	3602613	3605207	-	3603864	3605207	A3SS&ES	0.33	50	50	ENSMUST00000232131.2	ENSMUSG00000036983.8	Tfb1m	chr17	protein_coding	transcription factor B1, mitochondrial
chr17	3608179;3608956	3608796;3609818	+	3608179	3609818	cassetteExon	0.5	100	100	ENSMUST00000232089.2	ENSMUSG00000116852.2	1700102H20Rik	chr17	lncRNA	RIKEN cDNA 1700102H20 gene
chr17	4902741	4935115	-	4902741	4904039	5pMXE	0.5	50	50	ENSMUST00000232083.2	ENSMUSG00000116813.2	4930579D07Rik	chr17	lncRNA	RIKEN cDNA 4930579D07 gene
chr17	5293346	5329478	+	5293346;5314396	5314307;5329478	ES	0.5	50	50	ENSMUST00000092723.11	ENSMUSG00000069729.15	Arid1b	chr17	protein_coding	AT rich interactive domain 1B (SWI-like)
chr17	5362219;5364307	5364149;5368916	+	5362219	5368916	cassetteExon	0.5	100	100	ENSMUST00000092723.11	ENSMUSG00000069729.15	Arid1b	chr17	protein_coding	AT rich interactive domain 1B (SWI-like)
chr17	5454579	5467584	+	5462772	5467584	A5SS&ES	0.5	50	50	ENSMUST00000190865.2	ENSMUSG00000101133.2	Gm29050	chr17	lncRNA	predicted gene 29050
chr17	5483025	5483717	-	5461742	5483717	A3SS	0.5	50	50	ENSMUST00000005053.14	ENSMUSG00000004945.16	Tmem242	chr17	protein_coding	transmembrane protein 242
chr17	5849137	5852988	+	5851616	5852988	A5SS&ES	0.33	50	50	ENSMUST00000180924.8	ENSMUSG00000096965.8	3300005D01Rik	chr17	lncRNA	RIKEN cDNA 3300005D01 gene
chr17	5850268	5851474	+	5849035	5851474	A5SS	0.5	50	50	ENSMUST00000180924.8	ENSMUSG00000096965.8	3300005D01Rik	chr17	lncRNA	RIKEN cDNA 3300005D01 gene
chr17	5850268	5852988	+	5851616	5852988	A5SS&ES	0.33	50	50	ENSMUST00000180924.8	ENSMUSG00000096965.8	3300005D01Rik	chr17	lncRNA	RIKEN cDNA 3300005D01 gene
chr17	5850268	5852988	+	5849137	5852988	A5SS	0.33	50	50	ENSMUST00000180902.2	ENSMUSG00000096965.8	3300005D01Rik	chr17	lncRNA	RIKEN cDNA 3300005D01 gene
chr17	5850268	5852988	+	5850268;5851616	5851474;5852988	ES	0.5	50	50	ENSMUST00000181484.2	ENSMUSG00000096965.8	3300005D01Rik	chr17	lncRNA	RIKEN cDNA 3300005D01 gene
chr17	5891821;5921228	5920943;5937272	+	5891821	5937272	cassetteExon	0.5	100	100	ENSMUST00000002436.11	ENSMUSG00000002365.11	Snx9	chr17	protein_coding	sorting nexin 9
chr17	6026156	6040411	+	6026156;6036517	6036247;6040411	ES	0.33	50	50	ENSMUST00000115791.10	ENSMUSG00000023805.18	Synj2	chr17	protein_coding	synaptojanin 2
chr17	6063974	6067762	+	6063974;6066622	6066541;6067762	ES	0.5	50	50	ENSMUST00000115791.10	ENSMUSG00000023805.18	Synj2	chr17	protein_coding	synaptojanin 2
chr17	6078861	6082972	+	6078861;6080109	6079975;6082972	ES	0.5	50	50	ENSMUST00000115791.10	ENSMUSG00000023805.18	Synj2	chr17	protein_coding	synaptojanin 2
chr17	6085834	6094229	+	6085834	6087659	3pMXE	0.25	50	50	ENSMUST00000115791.10	ENSMUSG00000023805.18	Synj2	chr17	protein_coding	synaptojanin 2
chr17	6085834;6086780	6086632;6087659	+	6085834	6087659	cassetteExon	0.5	100	100	ENSMUST00000115791.10	ENSMUSG00000023805.18	Synj2	chr17	protein_coding	synaptojanin 2
chr17	6078861	6079959	+	6078861	6079975	A3SS	0.33	50	50	ENSMUST00000115791.10	ENSMUSG00000023805.18	Synj2	chr17	protein_coding	synaptojanin 2
chr17	6085834	6087864	+	6085834	6087659	A3SS	0.25	50	50	ENSMUST00000115791.10	ENSMUSG00000023805.18	Synj2	chr17	protein_coding	synaptojanin 2
chr17	6038344	6040411	+	6036517	6040411	A5SS	0.33	50	50	ENSMUST00000115791.10	ENSMUSG00000023805.18	Synj2	chr17	protein_coding	synaptojanin 2
chr17	6046496	6047153	+	6040636	6047153	A5SS	0.5	50	50	ENSMUST00000115791.10	ENSMUSG00000023805.18	Synj2	chr17	protein_coding	synaptojanin 2
chr17	6058007	6058213	+	6055694	6058213	A5SS	0.5	50	50	ENSMUST00000115791.10	ENSMUSG00000023805.18	Synj2	chr17	protein_coding	synaptojanin 2
chr17	6058374	6060007	+	6058385	6060007	A5SS	0.5	50	50	ENSMUST00000115791.10	ENSMUSG00000023805.18	Synj2	chr17	protein_coding	synaptojanin 2
chr17	6078861	6082972	+	6078861;6080109	6079959;6082972	ES	0.5	50	50	ENSMUST00000134767.8	ENSMUSG00000023805.18	Synj2	chr17	protein_coding	synaptojanin 2
chr17	6038344	6040411	+	6026156	6040411	A5SS	0.33	50	50	ENSMUST00000134767.8	ENSMUSG00000023805.18	Synj2	chr17	protein_coding	synaptojanin 2
chr17	6085834	6086632	+	6085834	6094229	A3SS	0.25	50	50	ENSMUST00000061091.14	ENSMUSG00000023805.18	Synj2	chr17	protein_coding	synaptojanin 2
chr17	6085834	6087864	+	6085834	6094229	A3SS	0.25	50	50	ENSMUST00000061091.14	ENSMUSG00000023805.18	Synj2	chr17	protein_coding	synaptojanin 2
chr17	6085834	6086632	+	6085834	6087864	A3SS	0.25	50	50	ENSMUST00000154114.8	ENSMUSG00000023805.18	Synj2	chr17	protein_coding	synaptojanin 2
chr17	6117935	6121028	-	6117935;6119663	6119574;6121028	ES	0.5	50	50	ENSMUST00000097432.10	ENSMUSG00000015659.13	Serac1	chr17	protein_coding	serine active site containing 1
chr17	6094525	6095999	-	6094525	6095920	A5SS	0.5	50	50	ENSMUST00000097432.10	ENSMUSG00000015659.13	Serac1	chr17	protein_coding	serine active site containing 1
chr17	6117935	6122109	-	6117935;6121164	6121028;6122109	ES	0.5	50	50	ENSMUST00000024570.6	ENSMUSG00000015659.13	Serac1	chr17	protein_coding	serine active site containing 1
chr17	6117935	6119574	-	6117935	6122109	A5SS	0.33	50	50	ENSMUST00000139542.2	ENSMUSG00000015659.13	Serac1	chr17	protein_coding	serine active site containing 1
chr17	6130349	6131077	+	6130186	6131077	A5SS	0.5	50	50	ENSMUST00000039487.10	ENSMUSG00000034345.15	Gtf2h5	chr17	protein_coding	general transcription factor IIH, polypeptide 5
chr17	6156857;6168641	6168571;6172103	+	6156857	6172103	cassetteExon	0.5	100	100	ENSMUST00000149838.8	ENSMUSG00000034377.11	Tulp4	chr17	protein_coding	tubby like protein 4
chr17	6172619	6174446	+	6172619	6187486	A3SS	0.5	50	50	ENSMUST00000149838.8	ENSMUSG00000034377.11	Tulp4	chr17	protein_coding	tubby like protein 4
chr17	6157271	6172103	+	6156857	6172103	A5SS	0.25	50	50	ENSMUST00000149838.8	ENSMUSG00000034377.11	Tulp4	chr17	protein_coding	tubby like protein 4
chr17	6157271	6187486	+	6172619	6187486	A5SS&ES	0.5	50	50	ENSMUST00000149838.8	ENSMUSG00000034377.11	Tulp4	chr17	protein_coding	tubby like protein 4
chr17	6158063	6172103	+	6156857	6172103	A5SS	0.25	50	50	ENSMUST00000149838.8	ENSMUSG00000034377.11	Tulp4	chr17	protein_coding	tubby like protein 4
chr17	6156857	6168571	+	6156857	6227104	A3SS	0.33	50	50	ENSMUST00000142030.8	ENSMUSG00000034377.11	Tulp4	chr17	protein_coding	tubby like protein 4
chr17	6156857	6172103	+	6156857	6227104	A3SS	0.33	50	50	ENSMUST00000142030.8	ENSMUSG00000034377.11	Tulp4	chr17	protein_coding	tubby like protein 4
chr17	6157271	6227104	+	6156857	6227104	A5SS	0.33	50	50	ENSMUST00000142030.8	ENSMUSG00000034377.11	Tulp4	chr17	protein_coding	tubby like protein 4
chr17	6189431	6227104	+	6156857	6227104	A5SS	0.33	50	50	ENSMUST00000142030.8	ENSMUSG00000034377.11	Tulp4	chr17	protein_coding	tubby like protein 4
chr17	6156857	6172103	+	6156857	6168571	A3SS&ES	0.5	50	50	ENSMUST00000151732.2	ENSMUSG00000034377.11	Tulp4	chr17	protein_coding	tubby like protein 4
chr17	6168641	6172103	+	6168641	6171470	A3SS	0.5	50	50	ENSMUST00000151732.2	ENSMUSG00000034377.11	Tulp4	chr17	protein_coding	tubby like protein 4
chr17	6157271	6187486	+	6157271	6172103	3pMXE	0.33	50	50	ENSMUST00000146758.8	ENSMUSG00000034377.11	Tulp4	chr17	protein_coding	tubby like protein 4
chr17	6157271	6227104	+	6157271	6172103	3pMXE	0.33	50	50	ENSMUST00000146758.8	ENSMUSG00000034377.11	Tulp4	chr17	protein_coding	tubby like protein 4
chr17	6158063	6172103	+	6157271	6172103	A5SS	0.25	50	50	ENSMUST00000146758.8	ENSMUSG00000034377.11	Tulp4	chr17	protein_coding	tubby like protein 4
chr17	6168641	6172103	+	6157271	6172103	A5SS	0.25	50	50	ENSMUST00000146758.8	ENSMUSG00000034377.11	Tulp4	chr17	protein_coding	tubby like protein 4
chr17	6157271	6227104	+	6157271	6187486	3pMXE	0.33	50	50	ENSMUST00000152672.2	ENSMUSG00000034377.11	Tulp4	chr17	protein_coding	tubby like protein 4
chr17	6284499	6291380	+	6284499	6286501	3pMXE	0.5	50	50	ENSMUST00000149756.8	ENSMUSG00000034377.11	Tulp4	chr17	protein_coding	tubby like protein 4
chr17	6189431	6227104	+	6157271	6227104	A5SS	0.33	50	50	ENSMUST00000149756.8	ENSMUSG00000034377.11	Tulp4	chr17	protein_coding	tubby like protein 4
chr17	6168641	6172103	+	6158063	6172103	A5SS	0.25	50	50	ENSMUST00000126982.8	ENSMUSG00000034377.11	Tulp4	chr17	protein_coding	tubby like protein 4
chr17	6156857	6172103	+	6168641	6172103	5pMXE	0.25	50	50	ENSMUST00000145340.8	ENSMUSG00000034377.11	Tulp4	chr17	protein_coding	tubby like protein 4
chr17	6320865	6330873	+	6307349	6330873	A5SS	0.5	50	50	ENSMUST00000232383.2	ENSMUSG00000038141.12	Tmem181a	chr17	protein_coding	transmembrane protein 181A
chr17	6348711	6349638	+	6348515	6349638	A5SS	0.33	50	50	ENSMUST00000232383.2	ENSMUSG00000038141.12	Tmem181a	chr17	protein_coding	transmembrane protein 181A
chr17	6347602;6348515	6348127;6349638	+	6347602	6349638	cassetteExon	0.5	100	100	ENSMUST00000228334.2	ENSMUSG00000038141.12	Tmem181a	chr17	protein_coding	transmembrane protein 181A
chr17	6348711	6349638	+	6347602	6349638	A5SS	0.33	50	50	ENSMUST00000228334.2	ENSMUSG00000038141.12	Tmem181a	chr17	protein_coding	transmembrane protein 181A
chr17	6361218	6361568	-	6359011	6361568	A3SS	0.5	50	50	ENSMUST00000232499.2	ENSMUSG00000092074.3	Dynlt1a	chr17	protein_coding	dynein light chain Tctex-type 1A
chr17	6708877	6709603	-	6706242	6709603	A3SS	0.5	50	50	ENSMUST00000180035.8	ENSMUSG00000096780.8	Tmem181b-ps	chr17	transcribed_unprocessed_pseudogene	transmembrane protein 181B, pseudogene
chr17	6717873	6719287	-	6716929	6719287	A3SS	0.5	50	50	ENSMUST00000188746.7	ENSMUSG00000096780.8	Tmem181b-ps	chr17	transcribed_unprocessed_pseudogene	transmembrane protein 181B, pseudogene
chr17	6954725	6968637	+	6954725;6967103	6967052;6968637	ES	0.5	50	50	ENSMUST00000097430.10	ENSMUSG00000041831.18	Sytl3	chr17	protein_coding	synaptotagmin-like 3
chr17	6968703	6973293	+	6968703;6970357	6970279;6973293	ES	0.5	50	50	ENSMUST00000097430.10	ENSMUSG00000041831.18	Sytl3	chr17	protein_coding	synaptotagmin-like 3
chr17	6943829;6949416	6949273;6954661	+	6943829	6954661	cassetteExon	0.5	100	100	ENSMUST00000097430.10	ENSMUSG00000041831.18	Sytl3	chr17	protein_coding	synaptotagmin-like 3
chr17	6943829	6947237	+	6943829	6954661	A3SS	0.33	50	50	ENSMUST00000097430.10	ENSMUSG00000041831.18	Sytl3	chr17	protein_coding	synaptotagmin-like 3
chr17	6973417	6976277	+	6973417	6976496	A3SS	0.5	50	50	ENSMUST00000097430.10	ENSMUSG00000041831.18	Sytl3	chr17	protein_coding	synaptotagmin-like 3
chr17	7000521	7001422	+	7000521	7001865	A3SS	0.5	50	50	ENSMUST00000097430.10	ENSMUSG00000041831.18	Sytl3	chr17	protein_coding	synaptotagmin-like 3
chr17	6930609	6940860	+	6926665	6940860	A5SS	0.5	50	50	ENSMUST00000097430.10	ENSMUSG00000041831.18	Sytl3	chr17	protein_coding	synaptotagmin-like 3
chr17	6956554	6967052	+	6954725	6967052	A5SS	0.5	50	50	ENSMUST00000097430.10	ENSMUSG00000041831.18	Sytl3	chr17	protein_coding	synaptotagmin-like 3
chr17	6943829	6949273	+	6943829	6947237	3pMXE	0.33	50	50	ENSMUST00000162013.4	ENSMUSG00000041831.18	Sytl3	chr17	protein_coding	synaptotagmin-like 3
chr17	7189138	7209068	-	7181497	7209068	A3SS	0.5	50	50	ENSMUST00000231794.2	ENSMUSG00000023806.11	Rsph3b	chr17	protein_coding	radial spoke 3B homolog (Chlamydomonas)
chr17	7251590;7252512	7252455;7256121	+	7251590	7256121	cassetteExon	0.5	100	100	ENSMUST00000231963.2	ENSMUSG00000094724.9	Rnaset2b	chr17	protein_coding	ribonuclease T2B
chr17	7245978	7248507	+	7238121	7248507	A5SS	0.33	50	50	ENSMUST00000231963.2	ENSMUSG00000094724.9	Rnaset2b	chr17	protein_coding	ribonuclease T2B
chr17	7246497	7248507	+	7238121	7248507	A5SS	0.33	50	50	ENSMUST00000231963.2	ENSMUSG00000094724.9	Rnaset2b	chr17	protein_coding	ribonuclease T2B
chr17	7246497	7251538	+	7248567	7251538	A5SS&ES	0.5	50	50	ENSMUST00000231963.2	ENSMUSG00000094724.9	Rnaset2b	chr17	protein_coding	ribonuclease T2B
chr17	7246497	7248507	+	7245978	7248507	A5SS	0.33	50	50	ENSMUST00000232304.2	ENSMUSG00000094724.9	Rnaset2b	chr17	protein_coding	ribonuclease T2B
chr17	7258097	7259080	+	7256191	7259080	A5SS	0.5	50	50	ENSMUST00000232304.2	ENSMUSG00000094724.9	Rnaset2b	chr17	protein_coding	ribonuclease T2B
chr17	7246497	7251538	+	7246497;7248567	7248507;7251538	ES	0.5	50	50	ENSMUST00000089119.13	ENSMUSG00000094724.9	Rnaset2b	chr17	protein_coding	ribonuclease T2B
chr17	7265532	7286673	+	7265532	7277157	3pMXE	0.5	50	50	ENSMUST00000179728.2	ENSMUSG00000094724.9	Rnaset2b	chr17	protein_coding	ribonuclease T2B
chr17	7251590	7256121	+	7252512	7256121	A5SS	0.5	50	50	ENSMUST00000232106.2	ENSMUSG00000094724.9	Rnaset2b	chr17	protein_coding	ribonuclease T2B
chr17	7297038	7346850	+	7297038	7311100	3pMXE	0.5	50	50	ENSMUST00000231550.2	ENSMUSG00000116876.2	Gm49721	chr17	protein_coding	predicted gene, 49721
chr17	7437842	7454487	+	7437842	7495312	A3SS	0.5	50	50	ENSMUST00000024575.8	ENSMUSG00000023809.11	Rps6ka2	chr17	protein_coding	ribosomal protein S6 kinase, polypeptide 2
chr17	7523372	7526510	+	7523372	7528403	A3SS	0.5	50	50	ENSMUST00000024575.8	ENSMUSG00000023809.11	Rps6ka2	chr17	protein_coding	ribosomal protein S6 kinase, polypeptide 2
chr17	7529615	7529774	+	7529615	7538991	A3SS	0.5	50	50	ENSMUST00000024575.8	ENSMUSG00000023809.11	Rps6ka2	chr17	protein_coding	ribosomal protein S6 kinase, polypeptide 2
chr17	7550268	7552739	+	7550268	7556314	A3SS	0.5	50	50	ENSMUST00000024575.8	ENSMUSG00000023809.11	Rps6ka2	chr17	protein_coding	ribosomal protein S6 kinase, polypeptide 2
chr17	7592300	7592789	+	7592148	7592789	A5SS	0.33	50	50	ENSMUST00000095726.11	ENSMUSG00000071322.13	Tcp10a	chr17	protein_coding	t-complex protein 10a
chr17	7592425	7592789	+	7592148	7592789	A5SS	0.33	50	50	ENSMUST00000095726.11	ENSMUSG00000071322.13	Tcp10a	chr17	protein_coding	t-complex protein 10a
chr17	7593003	7593232	+	7592915	7593232	A5SS	0.5	50	50	ENSMUST00000095726.11	ENSMUSG00000071322.13	Tcp10a	chr17	protein_coding	t-complex protein 10a
chr17	7592425	7592789	+	7592300	7592789	A5SS	0.33	50	50	ENSMUST00000129709.8	ENSMUSG00000071322.13	Tcp10a	chr17	protein_coding	t-complex protein 10a
chr17	7593003	7593232	+	7593003	7593204	A3SS	0.5	50	50	ENSMUST00000147803.8	ENSMUSG00000071322.13	Tcp10a	chr17	protein_coding	t-complex protein 10a
chr17	7631456	7637076	-	7620108	7637076	A3SS	0.5	50	50	ENSMUST00000231397.2	ENSMUSG00000116672.2	Gm49630	chr17	protein_coding	predicted gene, 49630
chr17	7647026	7652691	-	7647026	7652681	A5SS	0.5	50	50	ENSMUST00000070059.5	ENSMUSG00000056133.6	Unc93a2	chr17	protein_coding	unc-93 homolog A2
chr17	7795162	7797036	+	7795173	7797036	A5SS	0.5	50	50	ENSMUST00000232610.2	ENSMUSG00000116585.2	Gm33086	chr17	lncRNA	predicted gene, 33086
chr17	8008032	8045850	-	8008032	8023659	5pMXE	0.33	50	50	ENSMUST00000097425.10	ENSMUSG00000071984.12	Fndc1	chr17	protein_coding	fibronectin type III domain containing 1
chr17	8020486	8023659	-	8008032	8023659	A3SS	0.5	50	50	ENSMUST00000097425.10	ENSMUSG00000071984.12	Fndc1	chr17	protein_coding	fibronectin type III domain containing 1
chr17	7977362	7979803	-	7977362	7983790	A5SS	0.5	50	50	ENSMUST00000097425.10	ENSMUSG00000071984.12	Fndc1	chr17	protein_coding	fibronectin type III domain containing 1
chr17	8008032	8019727	-	8008032	8023659	A5SS	0.33	50	50	ENSMUST00000097425.10	ENSMUSG00000071984.12	Fndc1	chr17	protein_coding	fibronectin type III domain containing 1
chr17	8008032;8023853	8023659;8045850	-	8008032	8045850	cassetteExon	0.5	100	100	ENSMUST00000167580.8	ENSMUSG00000071984.12	Fndc1	chr17	protein_coding	fibronectin type III domain containing 1
chr17	8008032	8019727	-	8008032	8045850	A5SS	0.33	50	50	ENSMUST00000167580.8	ENSMUSG00000071984.12	Fndc1	chr17	protein_coding	fibronectin type III domain containing 1
chr17	8152119	8164928	-	8105805	8164928	A3SS	0.5	50	50	ENSMUST00000160177.3	ENSMUSG00000090069.3	E430024P14Rik	chr17	lncRNA	RIKEN cDNA E430024P14 gene
chr17	8152119	8164928	-	8152119	8164632	5pMXE	0.5	50	50	ENSMUST00000160545.2	ENSMUSG00000090069.3	E430024P14Rik	chr17	lncRNA	RIKEN cDNA E430024P14 gene
chr17	8145772	8145858	+	8145768	8145858	A5SS	0.5	50	50	ENSMUST00000036370.8	ENSMUSG00000033450.9	Tagap	chr17	protein_coding	T cell activation Rho GTPase activating protein
chr17	8171468	8188979	+	8171465	8188979	A5SS	0.5	50	50	ENSMUST00000232223.2	ENSMUSG00000073471.4	Rsph3a	chr17	protein_coding	radial spoke 3A homolog (Chlamydomonas)
chr17	8194768	8194877	+	8192972	8194877	A5SS	0.5	50	50	ENSMUST00000232223.2	ENSMUSG00000073471.4	Rsph3a	chr17	protein_coding	radial spoke 3A homolog (Chlamydomonas)
chr17	8171468	8173425	+	8171468	8188979	A3SS	0.5	50	50	ENSMUST00000097423.3	ENSMUSG00000073471.4	Rsph3a	chr17	protein_coding	radial spoke 3A homolog (Chlamydomonas)
chr17	8257645	8265448	-	8201434	8265448	A3SS	0.33	50	50	ENSMUST00000231840.2	ENSMUSG00000116760.2	Gm1604a	chr17	lncRNA	predicted gene 1604A
chr17	8263671	8265448	-	8201434	8265448	A3SS	0.33	50	50	ENSMUST00000231840.2	ENSMUSG00000116760.2	Gm1604a	chr17	lncRNA	predicted gene 1604A
chr17	8301776	8315935	-	8265507	8315935	A3SS	0.5	50	50	ENSMUST00000231840.2	ENSMUSG00000116760.2	Gm1604a	chr17	lncRNA	predicted gene 1604A
chr17	8265507	8265599	-	8265507	8315935	A5SS	0.5	50	50	ENSMUST00000231840.2	ENSMUSG00000116760.2	Gm1604a	chr17	lncRNA	predicted gene 1604A
chr17	8263671	8265448	-	8257645	8265448	A3SS	0.33	50	50	ENSMUST00000231559.2	ENSMUSG00000116760.2	Gm1604a	chr17	lncRNA	predicted gene 1604A
chr17	8335826	8347483	-	8326344	8347483	A3SS	0.5	50	50	ENSMUST00000232307.2	ENSMUSG00000116988.2	Gm49673	chr17	protein_coding	predicted gene, 49673
chr17	8391840	8401060	+	8391840;8394410	8394351;8401060	ES	0.5	50	50	ENSMUST00000097419.10	ENSMUSG00000069135.12	Cep43	chr17	protein_coding	centrosomal protein 43
chr17	8410269	8413353	+	8410269;8411113	8411017;8413353	ES	0.5	50	50	ENSMUST00000097419.10	ENSMUSG00000069135.12	Cep43	chr17	protein_coding	centrosomal protein 43
chr17	8391840	8401060	+	8391840	8394351	3pMXE	0.5	50	50	ENSMUST00000162586.2	ENSMUSG00000069135.12	Cep43	chr17	protein_coding	centrosomal protein 43
chr17	8455147;8474698	8474584;8474795	+	8455147	8474795	cassetteExon	0.5	100	100	ENSMUST00000231340.2	ENSMUSG00000040899.15	Ccr6	chr17	protein_coding	chemokine (C-C motif) receptor 6
chr17	8462692	8474795	+	8455147	8474795	A5SS	0.25	50	50	ENSMUST00000231340.2	ENSMUSG00000040899.15	Ccr6	chr17	protein_coding	chemokine (C-C motif) receptor 6
chr17	8464030	8474795	+	8455147	8474795	A5SS	0.25	50	50	ENSMUST00000231340.2	ENSMUSG00000040899.15	Ccr6	chr17	protein_coding	chemokine (C-C motif) receptor 6
chr17	8462692	8474584	+	8455147	8474584	A5SS	0.25	50	50	ENSMUST00000164411.10	ENSMUSG00000040899.15	Ccr6	chr17	protein_coding	chemokine (C-C motif) receptor 6
chr17	8462692	8474795	+	8474698	8474795	A5SS&ES	0.25	50	50	ENSMUST00000164411.10	ENSMUSG00000040899.15	Ccr6	chr17	protein_coding	chemokine (C-C motif) receptor 6
chr17	8464030	8474584	+	8455147	8474584	A5SS	0.25	50	50	ENSMUST00000164411.10	ENSMUSG00000040899.15	Ccr6	chr17	protein_coding	chemokine (C-C motif) receptor 6
chr17	8464030	8474795	+	8474698	8474795	A5SS&ES	0.25	50	50	ENSMUST00000164411.10	ENSMUSG00000040899.15	Ccr6	chr17	protein_coding	chemokine (C-C motif) receptor 6
chr17	8470952	8474584	+	8455147	8474584	A5SS	0.25	50	50	ENSMUST00000164411.10	ENSMUSG00000040899.15	Ccr6	chr17	protein_coding	chemokine (C-C motif) receptor 6
chr17	8464030	8474584	+	8464030;8470952	8470751;8474584	ES	0.33	50	50	ENSMUST00000097418.8	ENSMUSG00000040899.15	Ccr6	chr17	protein_coding	chemokine (C-C motif) receptor 6
chr17	8464030	8470168	+	8464030	8470751	A3SS	0.25	50	50	ENSMUST00000097418.8	ENSMUSG00000040899.15	Ccr6	chr17	protein_coding	chemokine (C-C motif) receptor 6
chr17	8462692	8474795	+	8462692;8464030	8463940;8474795	ES	0.33	50	50	ENSMUST00000166348.10	ENSMUSG00000040899.15	Ccr6	chr17	protein_coding	chemokine (C-C motif) receptor 6
chr17	8462692;8474698	8474584;8474795	+	8462692;8464030	8463940;8474795	MXE	0.5	100	100	ENSMUST00000166348.10	ENSMUSG00000040899.15	Ccr6	chr17	protein_coding	chemokine (C-C motif) receptor 6
chr17	8464030;8474698	8474584;8474795	+	8464030	8474795	cassetteExon	0.5	100	100	ENSMUST00000166348.10	ENSMUSG00000040899.15	Ccr6	chr17	protein_coding	chemokine (C-C motif) receptor 6
chr17	8464030	8470168	+	8464030	8474795	A3SS	0.25	50	50	ENSMUST00000166348.10	ENSMUSG00000040899.15	Ccr6	chr17	protein_coding	chemokine (C-C motif) receptor 6
chr17	8464030	8470751	+	8464030	8474795	A3SS	0.25	50	50	ENSMUST00000166348.10	ENSMUSG00000040899.15	Ccr6	chr17	protein_coding	chemokine (C-C motif) receptor 6
chr17	8462692	8474584	+	8462692;8464030	8463940;8474584	ES	0.33	50	50	ENSMUST00000180103.3	ENSMUSG00000040899.15	Ccr6	chr17	protein_coding	chemokine (C-C motif) receptor 6
chr17	8464030	8470168	+	8464030	8474584	A3SS	0.25	50	50	ENSMUST00000180103.3	ENSMUSG00000040899.15	Ccr6	chr17	protein_coding	chemokine (C-C motif) receptor 6
chr17	8462692	8474795	+	8462692;8474698	8474584;8474795	ES	0.33	50	50	ENSMUST00000177568.9	ENSMUSG00000040899.15	Ccr6	chr17	protein_coding	chemokine (C-C motif) receptor 6
chr17	8470952	8474584	+	8462692	8474584	A5SS	0.25	50	50	ENSMUST00000177568.9	ENSMUSG00000040899.15	Ccr6	chr17	protein_coding	chemokine (C-C motif) receptor 6
chr17	8462692	8474795	+	8464030	8474795	5pMXE	0.25	50	50	ENSMUST00000231545.2	ENSMUSG00000040899.15	Ccr6	chr17	protein_coding	chemokine (C-C motif) receptor 6
chr17	8502793;8515362	8515359;8515367	+	8502793;8512250	8512247;8515367	MXE	0.5	100	100	ENSMUST00000145402.8	ENSMUSG00000023861.18	Mpc1	chr17	protein_coding	mitochondrial pyruvate carrier 1
chr17	8507570	8512247	+	8502793	8512247	A5SS	0.5	50	50	ENSMUST00000145402.8	ENSMUSG00000023861.18	Mpc1	chr17	protein_coding	mitochondrial pyruvate carrier 1
chr17	8512327	8515367	+	8512250	8515367	A5SS	0.25	50	50	ENSMUST00000145402.8	ENSMUSG00000023861.18	Mpc1	chr17	protein_coding	mitochondrial pyruvate carrier 1
chr17	8515262	8515367	+	8512250	8515367	A5SS	0.25	50	50	ENSMUST00000145402.8	ENSMUSG00000023861.18	Mpc1	chr17	protein_coding	mitochondrial pyruvate carrier 1
chr17	8502793	8515359	+	8502793	8512247	3pMXE	0.5	50	50	ENSMUST00000147427.2	ENSMUSG00000023861.18	Mpc1	chr17	protein_coding	mitochondrial pyruvate carrier 1
chr17	8502793;8512327	8512247;8515367	+	8502793;8515362	8515359;8515367	MXE	0.5	100	100	ENSMUST00000046754.15	ENSMUSG00000023861.18	Mpc1	chr17	protein_coding	mitochondrial pyruvate carrier 1
chr17	8515262	8515367	+	8515362	8515367	A5SS&ES	0.25	50	50	ENSMUST00000046754.15	ENSMUSG00000023861.18	Mpc1	chr17	protein_coding	mitochondrial pyruvate carrier 1
chr17	8515262	8515367	+	8512327	8515367	A5SS	0.25	50	50	ENSMUST00000124023.8	ENSMUSG00000023861.18	Mpc1	chr17	protein_coding	mitochondrial pyruvate carrier 1
chr17	8515362	8515367	+	8512250	8515367	A5SS	0.25	50	50	ENSMUST00000142594.8	ENSMUSG00000023861.18	Mpc1	chr17	protein_coding	mitochondrial pyruvate carrier 1
chr17	8516075	8517100	-	8516075	8517312	A5SS	0.5	50	50	ENSMUST00000130639.2	ENSMUSG00000087478.2	4930506C21Rik	chr17	lncRNA	RIKEN cDNA 4930506C21 gene
chr17	8530117;8536703	8536682;8537676	+	8530117	8537676	cassetteExon	0.5	100	100	ENSMUST00000154553.2	ENSMUSG00000073468.13	Sft2d1	chr17	protein_coding	SFT2 domain containing 1
chr17	8540972	8542109	+	8540667	8542109	A5SS	0.5	50	50	ENSMUST00000154553.2	ENSMUSG00000073468.13	Sft2d1	chr17	protein_coding	SFT2 domain containing 1
chr17	8530117	8536682	+	8530117	8539432	A3SS	0.33	50	50	ENSMUST00000130782.8	ENSMUSG00000073468.13	Sft2d1	chr17	protein_coding	SFT2 domain containing 1
chr17	8530117	8537676	+	8530117	8539432	A3SS	0.33	50	50	ENSMUST00000130782.8	ENSMUSG00000073468.13	Sft2d1	chr17	protein_coding	SFT2 domain containing 1
chr17	8538333	8539432	+	8530117	8539432	A5SS	0.5	50	50	ENSMUST00000130782.8	ENSMUSG00000073468.13	Sft2d1	chr17	protein_coding	SFT2 domain containing 1
chr17	8530117	8537676	+	8530117	8536682	3pMXE	0.25	50	50	ENSMUST00000141213.2	ENSMUSG00000073468.13	Sft2d1	chr17	protein_coding	SFT2 domain containing 1
chr17	8530117	8591227	+	8530117	8536682	3pMXE	0.25	50	50	ENSMUST00000141213.2	ENSMUSG00000073468.13	Sft2d1	chr17	protein_coding	SFT2 domain containing 1
chr17	8530117	8537676	+	8530117	8591227	A3SS	0.25	50	50	ENSMUST00000140890.3	ENSMUSG00000117569.2	Gm49987	chr17	lncRNA	predicted gene, 49987
chr17	8530117	8539432	+	8530117	8591227	A3SS	0.25	50	50	ENSMUST00000140890.3	ENSMUSG00000117569.2	Gm49987	chr17	lncRNA	predicted gene, 49987
chr17	8575129	8591227	+	8530117	8591227	A5SS	0.5	50	50	ENSMUST00000140890.3	ENSMUSG00000117569.2	Gm49987	chr17	lncRNA	predicted gene, 49987
chr17	8615475	8615593	+	8611143	8615593	A5SS	0.5	50	50	ENSMUST00000140890.3	ENSMUSG00000117569.2	Gm49987	chr17	lncRNA	predicted gene, 49987
chr17	8559538	8559839	+	8556393	8559839	A5SS	0.33	50	50	ENSMUST00000232566.2	ENSMUSG00000055945.9	Prr18	chr17	protein_coding	proline rich 18
chr17	8559715	8559839	+	8556393	8559839	A5SS	0.33	50	50	ENSMUST00000232566.2	ENSMUSG00000055945.9	Prr18	chr17	protein_coding	proline rich 18
chr17	8559715	8559839	+	8559538	8559839	A5SS	0.33	50	50	ENSMUST00000069742.8	ENSMUSG00000055945.9	Prr18	chr17	protein_coding	proline rich 18
chr17	8631989	8636013	+	8631989	8640440	A3SS	0.5	50	50	ENSMUST00000234809.2	ENSMUSG00000058159.15	T2	chr17	protein_coding	brachyury 2
chr17	8637052	8640440	+	8631989	8640440	A5SS	0.5	50	50	ENSMUST00000234809.2	ENSMUSG00000058159.15	T2	chr17	protein_coding	brachyury 2
chr17	8656043	8657445	+	8656043	8657448	A3SS	0.5	50	50	ENSMUST00000074667.9	ENSMUSG00000062327.11	T	chr17	protein_coding	brachyury, T-box transcription factor T
chr17	9148044	9159973	+	9148044;9149391	9149342;9159973	ES	0.5	50	50	ENSMUST00000115715.8	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	8744647;8975925	8975794;9117693	+	8744647	9117693	cassetteExon	0.5	100	100	ENSMUST00000115715.8	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	8977099	9117693	+	8744647	9117693	A5SS	0.12	50	50	ENSMUST00000115715.8	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	9020977	9117693	+	8744647	9117693	A5SS	0.12	50	50	ENSMUST00000115715.8	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	9021954	9117693	+	8744647	9117693	A5SS	0.12	50	50	ENSMUST00000115715.8	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	9069076	9117693	+	8744647	9117693	A5SS	0.12	50	50	ENSMUST00000115715.8	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	9099311	9117693	+	8744647	9117693	A5SS	0.12	50	50	ENSMUST00000115715.8	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	9112281	9117693	+	8744647	9117693	A5SS	0.12	50	50	ENSMUST00000115715.8	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	9143073	9147924	+	9139364	9147924	A5SS	0.5	50	50	ENSMUST00000115715.8	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	9164548	9165628	+	9163826	9165628	A5SS	0.5	50	50	ENSMUST00000115715.8	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	8975925	9117693	+	8975925;8977099	8976977;9117693	ES	0.12	50	50	ENSMUST00000115722.8	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	8977099	9017411	+	8977099	9117693	A3SS	0.5	50	50	ENSMUST00000115722.8	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	8745947	8975794	+	8744647	8975794	A5SS	0.5	50	50	ENSMUST00000115722.8	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	9020977	9117693	+	8977099	9117693	A5SS	0.12	50	50	ENSMUST00000115722.8	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	9021954	9117693	+	8977099	9117693	A5SS	0.12	50	50	ENSMUST00000115722.8	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	9069076	9117693	+	8977099	9117693	A5SS	0.12	50	50	ENSMUST00000115722.8	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	9099311	9117693	+	8977099	9117693	A5SS	0.12	50	50	ENSMUST00000115722.8	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	9112281	9117693	+	8977099	9117693	A5SS	0.12	50	50	ENSMUST00000115722.8	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	9020977	9117693	+	8975925	9117693	A5SS	0.14	50	50	ENSMUST00000115724.9	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	9021954	9117693	+	8975925	9117693	A5SS	0.14	50	50	ENSMUST00000115724.9	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	9069076	9117693	+	8975925	9117693	A5SS	0.14	50	50	ENSMUST00000115724.9	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	9099311	9117693	+	8975925	9117693	A5SS	0.14	50	50	ENSMUST00000115724.9	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	9112281	9117693	+	8975925	9117693	A5SS	0.14	50	50	ENSMUST00000115724.9	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	8744647	9117693	+	8975925	9117693	5pMXE	0.12	50	50	ENSMUST00000233652.2	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	9021954	9117693	+	9020977	9117693	A5SS	0.12	50	50	ENSMUST00000141877.2	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	9069076	9117693	+	9020977	9117693	A5SS	0.12	50	50	ENSMUST00000141877.2	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	9099311	9117693	+	9020977	9117693	A5SS	0.12	50	50	ENSMUST00000141877.2	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	9112281	9117693	+	9020977	9117693	A5SS	0.12	50	50	ENSMUST00000141877.2	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	9069076	9117693	+	9021954	9117693	A5SS	0.12	50	50	ENSMUST00000233052.2	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	9099311	9117693	+	9021954	9117693	A5SS	0.12	50	50	ENSMUST00000233052.2	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	9112281	9117693	+	9021954	9117693	A5SS	0.12	50	50	ENSMUST00000233052.2	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	9099311	9117693	+	9069076	9117693	A5SS	0.12	50	50	ENSMUST00000115720.8	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	9112281	9117693	+	9069076	9117693	A5SS	0.12	50	50	ENSMUST00000115720.8	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	9112281	9117693	+	9099311	9117693	A5SS	0.12	50	50	ENSMUST00000024647.13	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	9148044	9159973	+	9148044	9149342	3pMXE	0.5	50	50	ENSMUST00000136160.2	ENSMUSG00000023868.18	Pde10a	chr17	protein_coding	phosphodiesterase 10A
chr17	9207253	9207361	+	9207253	9210878	A3SS	0.33	50	50	ENSMUST00000024650.12	ENSMUSG00000023873.14	1700010I14Rik	chr17	protein_coding	RIKEN cDNA 1700010I14 gene
chr17	9207253	9210958	+	9207253	9210878	A3SS	0.33	50	50	ENSMUST00000024650.12	ENSMUSG00000023873.14	1700010I14Rik	chr17	protein_coding	RIKEN cDNA 1700010I14 gene
chr17	9224586	9226729	+	9224586	9226838	A3SS	0.5	50	50	ENSMUST00000024650.12	ENSMUSG00000023873.14	1700010I14Rik	chr17	protein_coding	RIKEN cDNA 1700010I14 gene
chr17	9208900	9210878	+	9207253	9210878	A5SS	0.5	50	50	ENSMUST00000024650.12	ENSMUSG00000023873.14	1700010I14Rik	chr17	protein_coding	RIKEN cDNA 1700010I14 gene
chr17	9207253	9207361	+	9207253	9210958	A3SS	0.33	50	50	ENSMUST00000232775.2	ENSMUSG00000023873.14	1700010I14Rik	chr17	protein_coding	RIKEN cDNA 1700010I14 gene
chr17	9408067;9425413	9425342;9442030	+	9408067;9438603	9438387;9442030	MXE	0.5	100	100	ENSMUST00000233443.2	ENSMUSG00000117026.2	C87487	chr17	lncRNA	expressed sequence C87487
chr17	9924687;9930148	9929942;9941119	-	9924687	9941119	cassetteExon	0.5	100	100	ENSMUST00000233459.2	ENSMUSG00000117341.2	Gm34684	chr17	lncRNA	predicted gene, 34684
chr17	10457965	10501768	-	10457965;10492992	10492876;10501768	ES	0.5	50	50	ENSMUST00000233645.2	ENSMUSG00000062078.16	Qk	chr17	protein_coding	quaking, KH domain containing RNA binding
chr17	10433123	10435089	-	10432362	10435089	A3SS	0.33	50	50	ENSMUST00000233645.2	ENSMUSG00000062078.16	Qk	chr17	protein_coding	quaking, KH domain containing RNA binding
chr17	10434403	10435089	-	10432362	10435089	A3SS	0.33	50	50	ENSMUST00000233645.2	ENSMUSG00000062078.16	Qk	chr17	protein_coding	quaking, KH domain containing RNA binding
chr17	10434403	10435089	-	10433123	10435089	A3SS	0.33	50	50	ENSMUST00000097414.11	ENSMUSG00000062078.16	Qk	chr17	protein_coding	quaking, KH domain containing RNA binding
chr17	10543719	10543984	+	10543682	10543984	A5SS	0.5	50	50	ENSMUST00000187397.7	ENSMUSG00000099384.7	1700110C19Rik	chr17	lncRNA	RIKEN cDNA 1700110C19 gene
chr17	10816168	10849858	-	10816168	10996022	A5SS	0.5	50	50	ENSMUST00000041463.7	ENSMUSG00000037196.7	Pacrg	chr17	protein_coding	PARK2 co-regulated
chr17	10675272	10710223	+	10675272	10692036	3pMXE	0.33	50	50	ENSMUST00000160763.2	ENSMUSG00000089633.3	A230009B12Rik	chr17	lncRNA	RIKEN cDNA A230009B12 gene
chr17	10675272;10690503	10690381;10692036	+	10675272	10692036	cassetteExon	0.5	100	100	ENSMUST00000160763.2	ENSMUSG00000089633.3	A230009B12Rik	chr17	lncRNA	RIKEN cDNA A230009B12 gene
chr17	10683856	10692036	+	10675272	10692036	A5SS	0.33	50	50	ENSMUST00000160763.2	ENSMUSG00000089633.3	A230009B12Rik	chr17	lncRNA	RIKEN cDNA A230009B12 gene
chr17	10683856	10692036	+	10690503	10692036	A5SS&ES	0.33	50	50	ENSMUST00000159422.2	ENSMUSG00000089633.3	A230009B12Rik	chr17	lncRNA	RIKEN cDNA A230009B12 gene
chr17	10675272	10690381	+	10675272	10710223	A3SS	0.33	50	50	ENSMUST00000159602.3	ENSMUSG00000089633.3	A230009B12Rik	chr17	lncRNA	RIKEN cDNA A230009B12 gene
chr17	10715470	10770829	+	10715470	10788001	A3SS	0.5	50	50	ENSMUST00000161274.2	ENSMUSG00000089941.2	Gm16168	chr17	lncRNA	predicted gene 16168
chr17	11059376	11456349	+	11059376;11286179	11286016;11456349	ES	0.33	50	50	ENSMUST00000066658.13	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11286179	11522477	+	11286179;11456589	11456349;11522477	ES	0.5	50	50	ENSMUST00000066658.13	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11711681	11829491	+	11711681	11775802	3pMXE	0.2	50	50	ENSMUST00000066658.13	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11711681	11854197	+	11711681	11775802	3pMXE	0.2	50	50	ENSMUST00000066658.13	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11286179;11399261	11399144;11456349	+	11286179	11456349	cassetteExon	0.5	100	100	ENSMUST00000066658.13	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11059376	11158962	+	11059376	11286016	A3SS	0.33	50	50	ENSMUST00000066658.13	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11456589	11522480	+	11456589	11522477	A3SS	0.5	50	50	ENSMUST00000066658.13	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11711681	11712054	+	11711681	11775802	A3SS	0.2	50	50	ENSMUST00000066658.13	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11711681	11775535	+	11711681	11775802	A3SS	0.2	50	50	ENSMUST00000066658.13	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11711681	11829491	+	11711681	11775535	3pMXE	0.2	50	50	ENSMUST00000186167.2	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11711681	11854197	+	11711681	11775535	3pMXE	0.2	50	50	ENSMUST00000186167.2	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11711681	11712054	+	11711681	11775535	A3SS	0.2	50	50	ENSMUST00000186167.2	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11653520	11854197	+	11653520;11711681	11711566;11854197	ES	0.33	50	50	ENSMUST00000191124.7	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11286179	11522477	+	11286179	11456349	A3SS&ES	0.2	50	50	ENSMUST00000191124.7	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11711681	11712054	+	11711681	11854197	A3SS	0.2	50	50	ENSMUST00000191124.7	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11711681	11829491	+	11711681	11854197	A3SS	0.2	50	50	ENSMUST00000191124.7	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	12073763	12085553	+	12073763	12222932	A3SS	0.5	50	50	ENSMUST00000191124.7	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	12064250	12073614	+	12057550	12073614	A5SS	0.5	50	50	ENSMUST00000191124.7	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	12249048	12269513	+	12223015	12269513	A5SS	0.5	50	50	ENSMUST00000191124.7	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11286179	12057489	+	11286179;11854333	11854197;12057489	ES	0.5	50	50	ENSMUST00000233436.2	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11059376	11456349	+	11059376	11286016	A3SS&ES	0.33	50	50	ENSMUST00000233436.2	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11286179	11399144	+	11286179	11854197	A3SS	0.2	50	50	ENSMUST00000233436.2	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11286179	11456349	+	11286179	11854197	A3SS	0.2	50	50	ENSMUST00000233436.2	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11286179	11522477	+	11286179	11854197	A3SS	0.2	50	50	ENSMUST00000233436.2	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11653520	11854197	+	11286179	11854197	A5SS	0.33	50	50	ENSMUST00000233436.2	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11711681	11854197	+	11286179	11854197	A5SS	0.33	50	50	ENSMUST00000233436.2	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11059376;11456589	11456349;11522477	+	11059376;11286179	11286016;11522477	MXE	0.5	100	100	ENSMUST00000233634.2	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11286179	11399144	+	11286179	11522477	A3SS	0.2	50	50	ENSMUST00000233634.2	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11286179	11399144	+	11286179	12057489	A3SS	0.2	50	50	ENSMUST00000233411.2	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11286179	11456349	+	11286179	12057489	A3SS	0.2	50	50	ENSMUST00000233411.2	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11286179	11522477	+	11286179	12057489	A3SS	0.2	50	50	ENSMUST00000233411.2	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11059376;11286179	11286016;11854197	+	11059376;11711681	11456349;11854197	MXE	0.5	100	100	ENSMUST00000233706.2	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11059376;11286179	11286016;12057489	+	11059376;11854333	11456349;12057489	MXE	0.5	100	100	ENSMUST00000233706.2	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11059376	11158962	+	11059376	11456349	A3SS	0.33	50	50	ENSMUST00000233706.2	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11399261	11456349	+	11059376	11456349	A5SS	0.33	50	50	ENSMUST00000233706.2	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11059376	11456349	+	11286179	11456349	5pMXE	0.33	50	50	ENSMUST00000168593.9	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	11711681	11829491	+	11711681	11712054	3pMXE	0.2	50	50	ENSMUST00000168593.9	ENSMUSG00000023826.17	Prkn	chr17	protein_coding	parkin RBR E3 ubiquitin protein ligase
chr17	12370836	12429098	+	12370836;12417808	12417639;12429098	ES	0.5	50	50	ENSMUST00000164143.8	ENSMUSG00000023827.9	Agpat4	chr17	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)
chr17	12338302	12370579	+	12337727	12370579	A5SS	0.33	50	50	ENSMUST00000164143.8	ENSMUSG00000023827.9	Agpat4	chr17	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)
chr17	12352174	12370579	+	12337727	12370579	A5SS	0.33	50	50	ENSMUST00000164143.8	ENSMUSG00000023827.9	Agpat4	chr17	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)
chr17	12338302	12358128	+	12338302	12370579	A3SS	0.5	50	50	ENSMUST00000024594.9	ENSMUSG00000023827.9	Agpat4	chr17	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)
chr17	12352174	12370579	+	12338302	12370579	A5SS	0.33	50	50	ENSMUST00000024594.9	ENSMUSG00000023827.9	Agpat4	chr17	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)
chr17	12491107	12537385	-	12491107;12496998	12496808;12537385	ES	0.5	50	50	ENSMUST00000233755.2	ENSMUSG00000014426.10	Map3k4	chr17	protein_coding	mitogen-activated protein kinase kinase kinase 4
chr17	12458957;12461692	12461537;12462387	-	12458957	12462387	cassetteExon	0.5	100	100	ENSMUST00000233755.2	ENSMUSG00000014426.10	Map3k4	chr17	protein_coding	mitogen-activated protein kinase kinase kinase 4
chr17	12483035	12484655	-	12483035	12489750	A5SS	0.5	50	50	ENSMUST00000233755.2	ENSMUSG00000014426.10	Map3k4	chr17	protein_coding	mitogen-activated protein kinase kinase kinase 4
chr17	12496998	12527286	-	12496998	12537385	A5SS	0.33	50	50	ENSMUST00000233755.2	ENSMUSG00000014426.10	Map3k4	chr17	protein_coding	mitogen-activated protein kinase kinase kinase 4
chr17	12496998	12537087	-	12496998	12537385	A5SS	0.33	50	50	ENSMUST00000233755.2	ENSMUSG00000014426.10	Map3k4	chr17	protein_coding	mitogen-activated protein kinase kinase kinase 4
chr17	12496998	12527286	-	12496998	12537087	A5SS	0.33	50	50	ENSMUST00000233002.2	ENSMUSG00000014426.10	Map3k4	chr17	protein_coding	mitogen-activated protein kinase kinase kinase 4
chr17	12491107	12537385	-	12496998	12537385	3pMXE	0.5	50	50	ENSMUST00000233683.2	ENSMUSG00000014426.10	Map3k4	chr17	protein_coding	mitogen-activated protein kinase kinase kinase 4
chr17	12652564;12652782	12652685;12676432	-	12652564	12676432	cassetteExon	0.5	100	100	ENSMUST00000233535.2	ENSMUSG00000023828.4	Slc22a3	chr17	protein_coding	solute carrier family 22 (organic cation transporter), member 3
chr17	12685909	12694158	+	12685909	12697682	A3SS	0.33	50	50	ENSMUST00000233194.2	ENSMUSG00000117314.2	C030013G03Rik	chr17	lncRNA	RIKEN cDNA C030013G03 gene
chr17	12685909	12697725	+	12685909	12697682	A3SS	0.33	50	50	ENSMUST00000233194.2	ENSMUSG00000117314.2	C030013G03Rik	chr17	lncRNA	RIKEN cDNA C030013G03 gene
chr17	12685909	12697725	+	12685909;12694217	12694158;12697725	ES	0.5	50	50	ENSMUST00000233410.2	ENSMUSG00000117314.2	C030013G03Rik	chr17	lncRNA	RIKEN cDNA C030013G03 gene
chr17	12838774	12842513	+	12838774	12846931	A3SS	0.5	50	50	ENSMUST00000046959.9	ENSMUSG00000040966.11	Slc22a2	chr17	protein_coding	solute carrier family 22 (organic cation transporter), member 2
chr17	12885666;12886217	12886114;12894133	-	12885666	12894133	cassetteExon	0.5	100	100	ENSMUST00000233691.2	ENSMUSG00000023829.10	Slc22a1	chr17	protein_coding	solute carrier family 22 (organic cation transporter), member 1
chr17	12871371	12871570	-	12871371	12875825	A5SS	0.5	50	50	ENSMUST00000233691.2	ENSMUSG00000023829.10	Slc22a1	chr17	protein_coding	solute carrier family 22 (organic cation transporter), member 1
chr17	12917838	12918067	-	12917531	12918067	A3SS	0.5	50	50	ENSMUST00000024599.14	ENSMUSG00000023830.15	Igf2r	chr17	protein_coding	insulin-like growth factor 2 receptor
chr17	12967670	12969574	-	12967670	12988287	A5SS	0.5	50	50	ENSMUST00000024599.14	ENSMUSG00000023830.15	Igf2r	chr17	protein_coding	insulin-like growth factor 2 receptor
chr17	12960311	12998177	+	12960311	13077994	A3SS	0.16	50	50	ENSMUST00000160932.3	ENSMUSG00000078247.6	Airn	chr17	lncRNA	antisense Igf2r RNA
chr17	12960311	13017246	+	12960311	13077994	A3SS	0.16	50	50	ENSMUST00000160932.3	ENSMUSG00000078247.6	Airn	chr17	lncRNA	antisense Igf2r RNA
chr17	12960311	13032879	+	12960311	13077994	A3SS	0.16	50	50	ENSMUST00000160932.3	ENSMUSG00000078247.6	Airn	chr17	lncRNA	antisense Igf2r RNA
chr17	12960311	13033383	+	12960311	13077994	A3SS	0.16	50	50	ENSMUST00000160932.3	ENSMUSG00000078247.6	Airn	chr17	lncRNA	antisense Igf2r RNA
chr17	12960311	13048712	+	12960311	13077994	A3SS	0.16	50	50	ENSMUST00000160932.3	ENSMUSG00000078247.6	Airn	chr17	lncRNA	antisense Igf2r RNA
chr17	12960311;13017326	13017246;13048712	+	12960311	13048712	cassetteExon	0.5	100	100	ENSMUST00000162826.3	ENSMUSG00000078247.6	Airn	chr17	lncRNA	antisense Igf2r RNA
chr17	12960311	12998177	+	12960311	13048712	A3SS	0.16	50	50	ENSMUST00000162826.3	ENSMUSG00000078247.6	Airn	chr17	lncRNA	antisense Igf2r RNA
chr17	12960311	13032879	+	12960311	13048712	A3SS	0.16	50	50	ENSMUST00000162826.3	ENSMUSG00000078247.6	Airn	chr17	lncRNA	antisense Igf2r RNA
chr17	12960311	13033383	+	12960311	13048712	A3SS	0.16	50	50	ENSMUST00000162826.3	ENSMUSG00000078247.6	Airn	chr17	lncRNA	antisense Igf2r RNA
chr17	13035681	13048712	+	12960311	13048712	A5SS	0.33	50	50	ENSMUST00000162826.3	ENSMUSG00000078247.6	Airn	chr17	lncRNA	antisense Igf2r RNA
chr17	12960311;12998399	12998177;13033383	+	12960311	13033383	cassetteExon	0.5	100	100	ENSMUST00000079529.8	ENSMUSG00000078247.6	Airn	chr17	lncRNA	antisense Igf2r RNA
chr17	12960311;13032993	13032879;13033383	+	12960311	13033383	cassetteExon	0.5	100	100	ENSMUST00000079529.8	ENSMUSG00000078247.6	Airn	chr17	lncRNA	antisense Igf2r RNA
chr17	12960311	13017246	+	12960311	13033383	A3SS	0.16	50	50	ENSMUST00000079529.8	ENSMUSG00000078247.6	Airn	chr17	lncRNA	antisense Igf2r RNA
chr17	12960311;12998399	12998177;13033383	+	12960311;13032993	13032879;13033383	MXE	0.5	100	100	ENSMUST00000239232.2	ENSMUSG00000078247.6	Airn	chr17	lncRNA	antisense Igf2r RNA
chr17	12960311	13017246	+	12960311	13032879	A3SS	0.25	50	50	ENSMUST00000239232.2	ENSMUSG00000078247.6	Airn	chr17	lncRNA	antisense Igf2r RNA
chr17	12960311	13017246	+	12960311	12998177	A3SS&ES	0.25	50	50	ENSMUST00000159791.2	ENSMUSG00000078247.6	Airn	chr17	lncRNA	antisense Igf2r RNA
chr17	13035681	13048712	+	13017326	13048712	A5SS	0.33	50	50	ENSMUST00000159731.2	ENSMUSG00000078247.6	Airn	chr17	lncRNA	antisense Igf2r RNA
chr17	13065299	13073189	-	13065299;13067007	13066964;13073189	ES	0.5	50	50	ENSMUST00000089015.10	ENSMUSG00000068037.12	Mas1	chr17	protein_coding	MAS1 oncogene
chr17	13067007	13073324	-	13067007;13073220	13073189;13073324	ES	0.5	50	50	ENSMUST00000089015.10	ENSMUSG00000068037.12	Mas1	chr17	protein_coding	MAS1 oncogene
chr17	13065318	13066964	-	13065299	13066964	A3SS	0.5	50	50	ENSMUST00000089015.10	ENSMUSG00000068037.12	Mas1	chr17	protein_coding	MAS1 oncogene
chr17	13061457	13070602	-	13061457	13065125	A5SS&ES	0.5	50	50	ENSMUST00000089015.10	ENSMUSG00000068037.12	Mas1	chr17	protein_coding	MAS1 oncogene
chr17	13067007	13070602	-	13067007	13073189	A5SS	0.25	50	50	ENSMUST00000089015.10	ENSMUSG00000068037.12	Mas1	chr17	protein_coding	MAS1 oncogene
chr17	13065299	13073189	-	13065299	13066964	5pMXE	0.5	50	50	ENSMUST00000165020.8	ENSMUSG00000068037.12	Mas1	chr17	protein_coding	MAS1 oncogene
chr17	13065299	13073189	-	13067007	13073189	A3SS&ES	0.5	50	50	ENSMUST00000162333.8	ENSMUSG00000068037.12	Mas1	chr17	protein_coding	MAS1 oncogene
chr17	13065299;13067007	13066964;13073324	-	13065299;13073220	13073189;13073324	MXE	0.5	100	100	ENSMUST00000161747.8	ENSMUSG00000068037.12	Mas1	chr17	protein_coding	MAS1 oncogene
chr17	13067007	13073868	-	13067007	13073324	5pMXE	0.25	50	50	ENSMUST00000233607.2	ENSMUSG00000068037.12	Mas1	chr17	protein_coding	MAS1 oncogene
chr17	13067007	13070602	-	13067007	13073324	A5SS	0.25	50	50	ENSMUST00000233607.2	ENSMUSG00000068037.12	Mas1	chr17	protein_coding	MAS1 oncogene
chr17	13067007	13073868	-	13067007	13070602	5pMXE	0.25	50	50	ENSMUST00000162119.8	ENSMUSG00000068037.12	Mas1	chr17	protein_coding	MAS1 oncogene
chr17	13067007	13070602	-	13061457	13070602	A3SS	0.5	50	50	ENSMUST00000162389.2	ENSMUSG00000068037.12	Mas1	chr17	protein_coding	MAS1 oncogene
chr17	13067007;13073524	13073189;13073868	-	13067007	13073868	cassetteExon	0.5	100	100	ENSMUST00000159865.2	ENSMUSG00000068037.12	Mas1	chr17	protein_coding	MAS1 oncogene
chr17	13067007;13073524	13073324;13073868	-	13067007	13073868	cassetteExon	0.5	100	100	ENSMUST00000159865.2	ENSMUSG00000068037.12	Mas1	chr17	protein_coding	MAS1 oncogene
chr17	13111710	13114399	-	13111710;13113498	13113247;13114399	ES	0.33	50	50	ENSMUST00000233474.2	ENSMUSG00000073460.6	Pnldc1	chr17	protein_coding	poly(A)-specific ribonuclease (PARN)-like domain containing 1
chr17	13109315	13109608	-	13109341	13109608	A3SS	0.5	50	50	ENSMUST00000233474.2	ENSMUSG00000073460.6	Pnldc1	chr17	protein_coding	poly(A)-specific ribonuclease (PARN)-like domain containing 1
chr17	13113302	13114399	-	13113498	13114399	A3SS	0.33	50	50	ENSMUST00000233474.2	ENSMUSG00000073460.6	Pnldc1	chr17	protein_coding	poly(A)-specific ribonuclease (PARN)-like domain containing 1
chr17	13116220	13118420	-	13116217	13118420	A3SS	0.5	50	50	ENSMUST00000233474.2	ENSMUSG00000073460.6	Pnldc1	chr17	protein_coding	poly(A)-specific ribonuclease (PARN)-like domain containing 1
chr17	13119089	13122095	-	13118804	13122095	A3SS	0.5	50	50	ENSMUST00000233474.2	ENSMUSG00000073460.6	Pnldc1	chr17	protein_coding	poly(A)-specific ribonuclease (PARN)-like domain containing 1
chr17	13107856	13108870	-	13107856	13108963	A5SS	0.5	50	50	ENSMUST00000233474.2	ENSMUSG00000073460.6	Pnldc1	chr17	protein_coding	poly(A)-specific ribonuclease (PARN)-like domain containing 1
chr17	13111710	13114399	-	13111710;13113302	13113247;13114399	ES	0.33	50	50	ENSMUST00000163394.3	ENSMUSG00000073460.6	Pnldc1	chr17	protein_coding	poly(A)-specific ribonuclease (PARN)-like domain containing 1
chr17	13132888	13134444	-	13132888	13134525	A5SS	0.5	50	50	ENSMUST00000079121.4	ENSMUSG00000057388.10	Mrpl18	chr17	protein_coding	mitochondrial ribosomal protein L18
chr17	13134711	13134791	-	13134711	13134834	A5SS	0.33	50	50	ENSMUST00000079121.4	ENSMUSG00000057388.10	Mrpl18	chr17	protein_coding	mitochondrial ribosomal protein L18
chr17	13134711	13135006	-	13134711	13134834	A5SS	0.33	50	50	ENSMUST00000079121.4	ENSMUSG00000057388.10	Mrpl18	chr17	protein_coding	mitochondrial ribosomal protein L18
chr17	13134711	13135006	-	13134711	13134791	5pMXE	0.33	50	50	ENSMUST00000162781.8	ENSMUSG00000057388.10	Mrpl18	chr17	protein_coding	mitochondrial ribosomal protein L18
chr17	13135516	13136685	+	13134758	13136685	A5SS	0.5	50	50	ENSMUST00000147724.8	ENSMUSG00000068039.14	Tcp1	chr17	protein_coding	t-complex protein 1
chr17	13135516	13136930	+	13136770	13136930	A5SS&ES	0.5	50	50	ENSMUST00000147724.8	ENSMUSG00000068039.14	Tcp1	chr17	protein_coding	t-complex protein 1
chr17	13135516;13136770	13136685;13136930	+	13135516	13136930	cassetteExon	0.5	100	100	ENSMUST00000089024.13	ENSMUSG00000068039.14	Tcp1	chr17	protein_coding	t-complex protein 1
chr17	13166366	13171139	-	13166366;13167544	13167401;13171139	ES	0.5	50	50	ENSMUST00000007005.14	ENSMUSG00000023832.15	Acat2	chr17	protein_coding	acetyl-Coenzyme A acetyltransferase 2
chr17	13165302;13165754	13165703;13166244	-	13165302	13166244	cassetteExon	0.5	100	100	ENSMUST00000007005.14	ENSMUSG00000023832.15	Acat2	chr17	protein_coding	acetyl-Coenzyme A acetyltransferase 2
chr17	13204840	13212950	-	13204840	13211196	5pMXE	0.33	50	50	ENSMUST00000159551.8	ENSMUSG00000060475.14	Wtap	chr17	protein_coding	Wilms tumour 1-associating protein
chr17	13193995	13194183	-	13188446	13194183	A3SS	0.5	50	50	ENSMUST00000159551.8	ENSMUSG00000060475.14	Wtap	chr17	protein_coding	Wilms tumour 1-associating protein
chr17	13204840	13210964	-	13204840	13211196	A5SS	0.33	50	50	ENSMUST00000159551.8	ENSMUSG00000060475.14	Wtap	chr17	protein_coding	Wilms tumour 1-associating protein
chr17	13204840	13212950	-	13204840	13210964	5pMXE	0.33	50	50	ENSMUST00000007007.14	ENSMUSG00000060475.14	Wtap	chr17	protein_coding	Wilms tumour 1-associating protein
chr17	13211999	13212950	-	13204840	13212950	A3SS	0.5	50	50	ENSMUST00000233867.2	ENSMUSG00000060475.14	Wtap	chr17	protein_coding	Wilms tumour 1-associating protein
chr17	13232499	13253767	+	13232499	13233913	3pMXE	0.5	50	50	ENSMUST00000007012.6	ENSMUSG00000006818.6	Sod2	chr17	protein_coding	superoxide dismutase 2, mitochondrial
chr17	13227320	13229407	+	13227273	13229407	A5SS	0.5	50	50	ENSMUST00000007012.6	ENSMUSG00000006818.6	Sod2	chr17	protein_coding	superoxide dismutase 2, mitochondrial
chr17	13289831	13294493	+	13289831;13292502	13292362;13294493	ES	0.5	50	50	ENSMUST00000086787.11	ENSMUSG00000055602.18	Tcp10b	chr17	protein_coding	t-complex protein 10b
chr17	13280368	13280733	+	13280093	13280733	A5SS	0.5	50	50	ENSMUST00000086787.11	ENSMUSG00000055602.18	Tcp10b	chr17	protein_coding	t-complex protein 10b
chr17	13280947	13281176	+	13280859	13281176	A5SS	0.5	50	50	ENSMUST00000086787.11	ENSMUSG00000055602.18	Tcp10b	chr17	protein_coding	t-complex protein 10b
chr17	13289831	13294493	+	13289831	13292362	3pMXE	0.5	50	50	ENSMUST00000233962.2	ENSMUSG00000055602.18	Tcp10b	chr17	protein_coding	t-complex protein 10b
chr17	13344877	13350496	-	13344877;13350224	13350041;13350496	ES	0.5	50	50	ENSMUST00000232960.2	ENSMUSG00000067049.9	Unc93a	chr17	protein_coding	unc-93 homolog A
chr17	13344877	13347958	-	13344877	13350041	A5SS	0.33	50	50	ENSMUST00000232960.2	ENSMUSG00000067049.9	Unc93a	chr17	protein_coding	unc-93 homolog A
chr17	13344877	13347958	-	13344877	13350496	A5SS	0.33	50	50	ENSMUST00000084966.6	ENSMUSG00000067049.9	Unc93a	chr17	protein_coding	unc-93 homolog A
chr17	13414865	13416004	+	13414865	13416016	A3SS	0.5	50	50	ENSMUST00000233603.2	ENSMUSG00000117282.2	Gm49898	chr17	lncRNA	predicted gene, 49898
chr17	13576818;13580166	13580008;13581127	+	13576818	13581127	cassetteExon	0.5	100	100	ENSMUST00000233944.2	ENSMUSG00000052469.10	Tcp10c	chr17	protein_coding	t-complex protein 10c
chr17	13588478	13590460	+	13588478;13588846	13588749;13590460	ES	0.5	50	50	ENSMUST00000233884.2	ENSMUSG00000052469.10	Tcp10c	chr17	protein_coding	t-complex protein 10c
chr17	13614416	13614965	-	13614417	13614965	A3SS	0.5	50	50	ENSMUST00000233244.2	ENSMUSG00000117092.2	Gm49934	chr17	lncRNA	predicted gene, 49934
chr17	13717047	13760544	-	13717047	13720424	5pMXE	0.33	50	50	ENSMUST00000138345.8	ENSMUSG00000117042.2	2700054A10Rik	chr17	lncRNA	RIKEN cDNA 2700054A10 gene
chr17	13717047	13768558	-	13717047	13720424	5pMXE	0.33	50	50	ENSMUST00000138345.8	ENSMUSG00000117042.2	2700054A10Rik	chr17	lncRNA	RIKEN cDNA 2700054A10 gene
chr17	13711101	13716879	-	13703266	13716879	A3SS	0.5	50	50	ENSMUST00000138345.8	ENSMUSG00000117042.2	2700054A10Rik	chr17	lncRNA	RIKEN cDNA 2700054A10 gene
chr17	13717047	13768558	-	13717047;13760683	13760544;13768558	ES	0.5	50	50	ENSMUST00000137459.8	ENSMUSG00000117042.2	2700054A10Rik	chr17	lncRNA	RIKEN cDNA 2700054A10 gene
chr17	13774354	13981548	-	13774354	13789020	5pMXE	0.5	50	50	ENSMUST00000137459.8	ENSMUSG00000117042.2	2700054A10Rik	chr17	lncRNA	RIKEN cDNA 2700054A10 gene
chr17	13948284	13981548	-	13774354	13981548	A3SS	0.5	50	50	ENSMUST00000135850.8	ENSMUSG00000117063.2	Gm49936	chr17	lncRNA	predicted gene, 49936
chr17	13900446	13903440	-	13896048	13903440	A3SS	0.5	50	50	ENSMUST00000145030.2	ENSMUSG00000085705.2	Gm16046	chr17	lncRNA	predicted gene 16046
chr17	13900446	13903622	-	13900446	13903440	A5SS	0.5	50	50	ENSMUST00000150889.2	ENSMUSG00000085705.2	Gm16046	chr17	lncRNA	predicted gene 16046
chr17	13934379	13948184	-	13934379;13937895	13937762;13948184	ES	0.25	50	50	ENSMUST00000143162.8	ENSMUSG00000038347.16	Tcte2	chr17	protein_coding	t-complex-associated testis expressed 2
chr17	13934379;13942941	13942682;13948184	-	13934379;13937895	13937762;13948184	MXE	0.5	100	100	ENSMUST00000143162.8	ENSMUSG00000038347.16	Tcte2	chr17	protein_coding	t-complex-associated testis expressed 2
chr17	13937895;13942941	13942682;13948184	-	13937895	13948184	cassetteExon	0.5	100	100	ENSMUST00000143162.8	ENSMUSG00000038347.16	Tcte2	chr17	protein_coding	t-complex-associated testis expressed 2
chr17	13937895;13945225	13945164;13948184	-	13937895	13948184	cassetteExon	0.5	100	100	ENSMUST00000143162.8	ENSMUSG00000038347.16	Tcte2	chr17	protein_coding	t-complex-associated testis expressed 2
chr17	13934379	13948173	-	13934379	13937762	A5SS&ES	0.25	50	50	ENSMUST00000143162.8	ENSMUSG00000038347.16	Tcte2	chr17	protein_coding	t-complex-associated testis expressed 2
chr17	13948284	13952898	-	13948284	13981548	A5SS	0.33	50	50	ENSMUST00000143162.8	ENSMUSG00000038347.16	Tcte2	chr17	protein_coding	t-complex-associated testis expressed 2
chr17	13948284	13980170	-	13948284	13981548	A5SS	0.33	50	50	ENSMUST00000143162.8	ENSMUSG00000038347.16	Tcte2	chr17	protein_coding	t-complex-associated testis expressed 2
chr17	13934379;13942941	13942682;13948184	-	13934379	13948184	cassetteExon	0.5	100	100	ENSMUST00000053376.12	ENSMUSG00000038347.16	Tcte2	chr17	protein_coding	t-complex-associated testis expressed 2
chr17	13945225	13948184	-	13934379	13948184	A3SS	0.25	50	50	ENSMUST00000053376.12	ENSMUSG00000038347.16	Tcte2	chr17	protein_coding	t-complex-associated testis expressed 2
chr17	13934379	13948173	-	13934379	13948184	A5SS	0.25	50	50	ENSMUST00000053376.12	ENSMUSG00000038347.16	Tcte2	chr17	protein_coding	t-complex-associated testis expressed 2
chr17	13934379	13948173	-	13934379;13942941	13942682;13948173	ES	0.5	50	50	ENSMUST00000128194.8	ENSMUSG00000038347.16	Tcte2	chr17	protein_coding	t-complex-associated testis expressed 2
chr17	13934379;13937895	13937762;13942682	-	13934379	13942682	cassetteExon	0.5	100	100	ENSMUST00000128194.8	ENSMUSG00000038347.16	Tcte2	chr17	protein_coding	t-complex-associated testis expressed 2
chr17	13934379	13948184	-	13934379	13942682	A5SS&ES	0.25	50	50	ENSMUST00000128194.8	ENSMUSG00000038347.16	Tcte2	chr17	protein_coding	t-complex-associated testis expressed 2
chr17	13942941	13948184	-	13942941	13948173	A5SS	0.5	50	50	ENSMUST00000128194.8	ENSMUSG00000038347.16	Tcte2	chr17	protein_coding	t-complex-associated testis expressed 2
chr17	13948284	13980170	-	13948284	13952898	5pMXE	0.33	50	50	ENSMUST00000142863.2	ENSMUSG00000038347.16	Tcte2	chr17	protein_coding	t-complex-associated testis expressed 2
chr17	13937895;13942941	13942682;13948184	-	13937895;13945225	13945164;13948184	MXE	0.5	100	100	ENSMUST00000130033.8	ENSMUSG00000038347.16	Tcte2	chr17	protein_coding	t-complex-associated testis expressed 2
chr17	13934379	13942682	-	13937895	13942682	3pMXE	0.5	50	50	ENSMUST00000127032.8	ENSMUSG00000038347.16	Tcte2	chr17	protein_coding	t-complex-associated testis expressed 2
chr17	13934379	13948184	-	13937895	13948184	3pMXE	0.25	50	50	ENSMUST00000148430.2	ENSMUSG00000038347.16	Tcte2	chr17	protein_coding	t-complex-associated testis expressed 2
chr17	13979822	13980170	-	13948284	13980170	A3SS	0.5	50	50	ENSMUST00000232858.2	ENSMUSG00000038347.16	Tcte2	chr17	protein_coding	t-complex-associated testis expressed 2
chr17	14024396	14027542	+	14024396	14027539	A3SS	0.5	50	50	ENSMUST00000139347.8	ENSMUSG00000068036.17	Afdn	chr17	protein_coding	afadin, adherens junction formation factor
chr17	14027654	14029194	+	14027654	14029197	A3SS	0.5	50	50	ENSMUST00000139347.8	ENSMUSG00000068036.17	Afdn	chr17	protein_coding	afadin, adherens junction formation factor
chr17	13982265	14024201	+	13981040	14024201	A5SS	0.5	50	50	ENSMUST00000139347.8	ENSMUSG00000068036.17	Afdn	chr17	protein_coding	afadin, adherens junction formation factor
chr17	14043720;14046249	14046205;14049191	+	14043720	14049191	cassetteExon	0.5	100	100	ENSMUST00000170827.9	ENSMUSG00000068036.17	Afdn	chr17	protein_coding	afadin, adherens junction formation factor
chr17	14066901;14068637	14068617;14069370	+	14066901	14069370	cassetteExon	0.5	100	100	ENSMUST00000170827.9	ENSMUSG00000068036.17	Afdn	chr17	protein_coding	afadin, adherens junction formation factor
chr17	14109239;14111260	14111225;14116350	+	14109239	14116350	cassetteExon	0.5	100	100	ENSMUST00000170827.9	ENSMUSG00000068036.17	Afdn	chr17	protein_coding	afadin, adherens junction formation factor
chr17	14072721	14074182	+	14072721	14075476	A3SS	0.5	50	50	ENSMUST00000170827.9	ENSMUSG00000068036.17	Afdn	chr17	protein_coding	afadin, adherens junction formation factor
chr17	14087979	14101547	+	14082117	14101547	A5SS	0.33	50	50	ENSMUST00000170827.9	ENSMUSG00000068036.17	Afdn	chr17	protein_coding	afadin, adherens junction formation factor
chr17	14095246	14101547	+	14082117	14101547	A5SS	0.33	50	50	ENSMUST00000170827.9	ENSMUSG00000068036.17	Afdn	chr17	protein_coding	afadin, adherens junction formation factor
chr17	14119720	14122792	+	14119489	14122792	A5SS	0.5	50	50	ENSMUST00000170827.9	ENSMUSG00000068036.17	Afdn	chr17	protein_coding	afadin, adherens junction formation factor
chr17	14095246	14101547	+	14087979	14101547	A5SS	0.33	50	50	ENSMUST00000239324.2	ENSMUSG00000068036.17	Afdn	chr17	protein_coding	afadin, adherens junction formation factor
chr17	14419540	14424438	-	14419540	14423776	5pMXE	0.5	50	50	ENSMUST00000053218.7	ENSMUSG00000048826.8	Dact2	chr17	protein_coding	dishevelled-binding antagonist of beta-catenin 2
chr17	14545968	14546216	+	14545968	14556809	A3SS	0.5	50	50	ENSMUST00000024660.9	ENSMUSG00000023886.11	Smoc2	chr17	protein_coding	SPARC related modular calcium binding 2
chr17	14564636	14567436	+	14564636	14567469	A3SS	0.5	50	50	ENSMUST00000024660.9	ENSMUSG00000023886.11	Smoc2	chr17	protein_coding	SPARC related modular calcium binding 2
chr17	14619412	14619633	+	14617885	14619633	A5SS	0.33	50	50	ENSMUST00000024660.9	ENSMUSG00000023886.11	Smoc2	chr17	protein_coding	SPARC related modular calcium binding 2
chr17	14619525	14619633	+	14617885	14619633	A5SS	0.33	50	50	ENSMUST00000024660.9	ENSMUSG00000023886.11	Smoc2	chr17	protein_coding	SPARC related modular calcium binding 2
chr17	14621250	14621804	+	14619907	14621804	A5SS	0.5	50	50	ENSMUST00000024660.9	ENSMUSG00000023886.11	Smoc2	chr17	protein_coding	SPARC related modular calcium binding 2
chr17	14619525	14619633	+	14619412	14619633	A5SS	0.33	50	50	ENSMUST00000233526.2	ENSMUSG00000023886.11	Smoc2	chr17	protein_coding	SPARC related modular calcium binding 2
chr17	15039268	15049778	-	15039268;15039740	15039580;15049778	ES	0.5	50	50	ENSMUST00000232147.2	ENSMUSG00000046991.13	Wdr27	chr17	protein_coding	WD repeat domain 27
chr17	15096454	15103880	-	15096454;15103118	15103016;15103880	ES	0.5	50	50	ENSMUST00000232147.2	ENSMUSG00000046991.13	Wdr27	chr17	protein_coding	WD repeat domain 27
chr17	15128890	15129747	-	15128890	15130266	A5SS	0.5	50	50	ENSMUST00000232147.2	ENSMUSG00000046991.13	Wdr27	chr17	protein_coding	WD repeat domain 27
chr17	15159842	15163359	-	15154922	15163359	A3SS	0.5	50	50	ENSMUST00000228330.2	ENSMUSG00000046991.13	Wdr27	chr17	protein_coding	WD repeat domain 27
chr17	15159842	15163197	-	15159842	15163359	A5SS	0.5	50	50	ENSMUST00000228869.2	ENSMUSG00000046991.13	Wdr27	chr17	protein_coding	WD repeat domain 27
chr17	15162232	15163197	-	15159842	15163197	A3SS	0.5	50	50	ENSMUST00000228221.2	ENSMUSG00000046991.13	Wdr27	chr17	protein_coding	WD repeat domain 27
chr17	15163581	15169130	+	15163581	15163829	3pMXE	0.25	50	50	ENSMUST00000052691.9	ENSMUSG00000050088.10	1600012H06Rik	chr17	protein_coding	RIKEN cDNA 1600012H06 gene
chr17	15163581	15163764	+	15163581	15163829	A3SS	0.25	50	50	ENSMUST00000052691.9	ENSMUSG00000050088.10	1600012H06Rik	chr17	protein_coding	RIKEN cDNA 1600012H06 gene
chr17	15163581	15163834	+	15163581	15163829	A3SS	0.25	50	50	ENSMUST00000052691.9	ENSMUSG00000050088.10	1600012H06Rik	chr17	protein_coding	RIKEN cDNA 1600012H06 gene
chr17	15163581	15169130	+	15163581	15163764	3pMXE	0.25	50	50	ENSMUST00000164837.3	ENSMUSG00000050088.10	1600012H06Rik	chr17	protein_coding	RIKEN cDNA 1600012H06 gene
chr17	15163581	15163834	+	15163581	15163764	A3SS	0.25	50	50	ENSMUST00000164837.3	ENSMUSG00000050088.10	1600012H06Rik	chr17	protein_coding	RIKEN cDNA 1600012H06 gene
chr17	15163581	15169130	+	15163581	15163834	3pMXE	0.25	50	50	ENSMUST00000174004.2	ENSMUSG00000050088.10	1600012H06Rik	chr17	protein_coding	RIKEN cDNA 1600012H06 gene
chr17	15173035	15175054	-	15173035;15174386	15174277;15175054	ES	0.5	50	50	ENSMUST00000024657.12	ENSMUSG00000023883.14	Phf10	chr17	protein_coding	PHD finger protein 10
chr17	15184617;15187963	15187808;15190649	-	15184617	15190649	cassetteExon	0.5	100	100	ENSMUST00000231584.2	ENSMUSG00000116780.2	Dynlt2a3	chr17	protein_coding	dynein light chain Tctex-type 2A3
chr17	15184617;15190069	15190033;15190649	-	15184617	15190649	cassetteExon	0.5	100	100	ENSMUST00000231584.2	ENSMUSG00000116780.2	Dynlt2a3	chr17	protein_coding	dynein light chain Tctex-type 2A3
chr17	15184617;15190069	15190033;15190649	-	15184617;15187963	15187808;15190649	MXE	0.5	100	100	ENSMUST00000097399.6	ENSMUSG00000116780.2	Dynlt2a3	chr17	protein_coding	dynein light chain Tctex-type 2A3
chr17	15202651;15203296	15203151;15205080	+	15202651	15205080	cassetteExon	0.5	100	100	ENSMUST00000061688.11	ENSMUSG00000116953.2	9030025P20Rik	chr17	protein_coding	RIKEN cDNA 9030025P20 gene
chr17	15199256	15199763	+	15199161	15199763	A5SS	0.5	50	50	ENSMUST00000061688.11	ENSMUSG00000116953.2	9030025P20Rik	chr17	protein_coding	RIKEN cDNA 9030025P20 gene
chr17	15236548	15238347	+	15236548;15237539	15237403;15238347	ES	0.5	50	50	ENSMUST00000097395.5	ENSMUSG00000116895.2	Gm3435	chr17	protein_coding	predicted gene 3435
chr17	15247579;15250926	15250771;15253609	-	15247579	15253609	cassetteExon	0.5	100	100	ENSMUST00000097398.12	ENSMUSG00000079707.11	Dynlt2a1	chr17	protein_coding	dynein light chain Tctex-type 2A1
chr17	15267924	15269726	+	15267924;15268918	15268782;15269726	ES	0.5	50	50	ENSMUST00000097393.11	ENSMUSG00000036552.20	Ermard	chr17	protein_coding	ER membrane associated RNA degradation
chr17	15277096	15279606	+	15277096;15279098	15279022;15279606	ES	0.5	50	50	ENSMUST00000097393.11	ENSMUSG00000036552.20	Ermard	chr17	protein_coding	ER membrane associated RNA degradation
chr17	15279731	15281331	+	15279731;15280246	15280028;15281331	ES	0.5	50	50	ENSMUST00000097393.11	ENSMUSG00000036552.20	Ermard	chr17	protein_coding	ER membrane associated RNA degradation
chr17	15281444	15284247	+	15281444	15283864	3pMXE	0.2	50	50	ENSMUST00000097393.11	ENSMUSG00000036552.20	Ermard	chr17	protein_coding	ER membrane associated RNA degradation
chr17	15281444	15286088	+	15281444	15283864	3pMXE	0.2	50	50	ENSMUST00000097393.11	ENSMUSG00000036552.20	Ermard	chr17	protein_coding	ER membrane associated RNA degradation
chr17	15281444	15310001	+	15281444	15283864	3pMXE	0.2	50	50	ENSMUST00000097393.11	ENSMUSG00000036552.20	Ermard	chr17	protein_coding	ER membrane associated RNA degradation
chr17	15265398	15265898	+	15265398	15267827	A3SS	0.5	50	50	ENSMUST00000097393.11	ENSMUSG00000036552.20	Ermard	chr17	protein_coding	ER membrane associated RNA degradation
chr17	15281444	15283842	+	15281444	15283864	A3SS	0.2	50	50	ENSMUST00000097393.11	ENSMUSG00000036552.20	Ermard	chr17	protein_coding	ER membrane associated RNA degradation
chr17	15262003	15262510	+	15261908	15262510	A5SS	0.33	50	50	ENSMUST00000097393.11	ENSMUSG00000036552.20	Ermard	chr17	protein_coding	ER membrane associated RNA degradation
chr17	15262095	15262510	+	15261908	15262510	A5SS	0.33	50	50	ENSMUST00000097393.11	ENSMUSG00000036552.20	Ermard	chr17	protein_coding	ER membrane associated RNA degradation
chr17	15263519	15264585	+	15263406	15264585	A5SS	0.5	50	50	ENSMUST00000097393.11	ENSMUSG00000036552.20	Ermard	chr17	protein_coding	ER membrane associated RNA degradation
chr17	15264692	15265309	+	15264686	15265309	A5SS	0.5	50	50	ENSMUST00000097393.11	ENSMUSG00000036552.20	Ermard	chr17	protein_coding	ER membrane associated RNA degradation
chr17	15273345	15273476	+	15271901	15273476	A5SS	0.5	50	50	ENSMUST00000097393.11	ENSMUSG00000036552.20	Ermard	chr17	protein_coding	ER membrane associated RNA degradation
chr17	15262095	15262510	+	15262003	15262510	A5SS	0.33	50	50	ENSMUST00000228518.2	ENSMUSG00000036552.20	Ermard	chr17	protein_coding	ER membrane associated RNA degradation
chr17	15267924	15269726	+	15267924	15268782	3pMXE	0.5	50	50	ENSMUST00000226384.2	ENSMUSG00000036552.20	Ermard	chr17	protein_coding	ER membrane associated RNA degradation
chr17	15262003	15262510	+	15262003	15265370	A3SS	0.5	50	50	ENSMUST00000227548.2	ENSMUSG00000036552.20	Ermard	chr17	protein_coding	ER membrane associated RNA degradation
chr17	15281444	15283842	+	15281444	15310001	A3SS	0.2	50	50	ENSMUST00000231568.2	ENSMUSG00000036552.20	Ermard	chr17	protein_coding	ER membrane associated RNA degradation
chr17	15281444	15284247	+	15281444	15310001	A3SS	0.2	50	50	ENSMUST00000231568.2	ENSMUSG00000036552.20	Ermard	chr17	protein_coding	ER membrane associated RNA degradation
chr17	15281444	15286088	+	15281444	15310001	A3SS	0.2	50	50	ENSMUST00000231568.2	ENSMUSG00000036552.20	Ermard	chr17	protein_coding	ER membrane associated RNA degradation
chr17	15281444	15286088	+	15281444	15283842	3pMXE	0.2	50	50	ENSMUST00000228803.2	ENSMUSG00000036552.20	Ermard	chr17	protein_coding	ER membrane associated RNA degradation
chr17	15281444	15284247	+	15281444	15283842	A3SS	0.2	50	50	ENSMUST00000228803.2	ENSMUSG00000036552.20	Ermard	chr17	protein_coding	ER membrane associated RNA degradation
chr17	15281444	15286088	+	15281444	15284247	3pMXE	0.2	50	50	ENSMUST00000227252.2	ENSMUSG00000036552.20	Ermard	chr17	protein_coding	ER membrane associated RNA degradation
chr17	15460623	15460963	-	15460623	15468062	A5SS	0.5	50	50	ENSMUST00000231526.2	ENSMUSG00000097624.3	Gm5091	chr17	lncRNA	predicted gene 5091
chr17	15591928	15592019	-	15591928	15593699	A5SS	0.5	50	50	ENSMUST00000014917.8	ENSMUSG00000014773.14	Dll1	chr17	protein_coding	delta like canonical Notch ligand 1
chr17	15624659	15626017	+	15623391	15626017	A5SS	0.5	50	50	ENSMUST00000055352.8	ENSMUSG00000014763.9	Fam120b	chr17	protein_coding	family with sequence similarity 120, member B
chr17	15642666	15643508	-	15642679	15643508	A3SS	0.5	50	50	ENSMUST00000231577.2	ENSMUSG00000116718.2	Gm49668	chr17	lncRNA	predicted gene, 49668
chr17	15652103	15655035	-	15652103	15655125	A5SS	0.5	50	50	ENSMUST00000231577.2	ENSMUSG00000116718.2	Gm49668	chr17	lncRNA	predicted gene, 49668
chr17	15714785	15719495	-	15714785	15718415	5pMXE	0.5	50	50	ENSMUST00000014913.11	ENSMUSG00000014769.11	Psmb1	chr17	protein_coding	proteasome (prosome, macropain) subunit, beta type 1
chr17	15720286	15723224	+	15720286;15721464	15721416;15723224	ES	0.5	50	50	ENSMUST00000159197.8	ENSMUSG00000014767.18	Tbp	chr17	protein_coding	TATA box binding protein
chr17	15720286	15721574	+	15720286	15721416	A3SS&ES	0.25	50	50	ENSMUST00000159197.8	ENSMUSG00000014767.18	Tbp	chr17	protein_coding	TATA box binding protein
chr17	15720286	15723227	+	15720286	15721416	A3SS&ES	0.25	50	50	ENSMUST00000159197.8	ENSMUSG00000014767.18	Tbp	chr17	protein_coding	TATA box binding protein
chr17	15721464	15721574	+	15721464	15723224	A3SS	0.33	50	50	ENSMUST00000159197.8	ENSMUSG00000014767.18	Tbp	chr17	protein_coding	TATA box binding protein
chr17	15721464	15723227	+	15721464	15723224	A3SS	0.33	50	50	ENSMUST00000159197.8	ENSMUSG00000014767.18	Tbp	chr17	protein_coding	TATA box binding protein
chr17	15720488	15721416	+	15720286	15721416	A5SS	0.5	50	50	ENSMUST00000159197.8	ENSMUSG00000014767.18	Tbp	chr17	protein_coding	TATA box binding protein
chr17	15720286	15723227	+	15720286;15721464	15721416;15723227	ES	0.33	50	50	ENSMUST00000014911.12	ENSMUSG00000014767.18	Tbp	chr17	protein_coding	TATA box binding protein
chr17	15733883	15735878	+	15733883;15734659	15734492;15735878	ES	0.5	50	50	ENSMUST00000014911.12	ENSMUSG00000014767.18	Tbp	chr17	protein_coding	TATA box binding protein
chr17	15720286;15721619	15721574;15723227	+	15720286;15721464	15721416;15723227	MXE	0.5	100	100	ENSMUST00000014911.12	ENSMUSG00000014767.18	Tbp	chr17	protein_coding	TATA box binding protein
chr17	15721464;15721619	15721574;15723227	+	15721464	15723227	cassetteExon	0.5	100	100	ENSMUST00000014911.12	ENSMUSG00000014767.18	Tbp	chr17	protein_coding	TATA box binding protein
chr17	15724909;15726672	15726634;15727605	+	15724909	15727605	cassetteExon	0.5	100	100	ENSMUST00000014911.12	ENSMUSG00000014767.18	Tbp	chr17	protein_coding	TATA box binding protein
chr17	15720286	15723224	+	15720286	15721416	A3SS&ES	0.25	50	50	ENSMUST00000014911.12	ENSMUSG00000014767.18	Tbp	chr17	protein_coding	TATA box binding protein
chr17	15720286;15721619	15721416;15723227	+	15720286	15723227	cassetteExon	0.5	100	100	ENSMUST00000162505.8	ENSMUSG00000014767.18	Tbp	chr17	protein_coding	TATA box binding protein
chr17	15720286;15721619	15721574;15723227	+	15720286	15723227	cassetteExon	0.5	100	100	ENSMUST00000162505.8	ENSMUSG00000014767.18	Tbp	chr17	protein_coding	TATA box binding protein
chr17	15720286	15723224	+	15720286	15723227	A3SS	0.25	50	50	ENSMUST00000162505.8	ENSMUSG00000014767.18	Tbp	chr17	protein_coding	TATA box binding protein
chr17	15720286;15721464	15721416;15721574	+	15720286	15721574	cassetteExon	0.5	100	100	ENSMUST00000147081.9	ENSMUSG00000014767.18	Tbp	chr17	protein_coding	TATA box binding protein
chr17	15720286	15723224	+	15720286	15721574	A3SS&ES	0.25	50	50	ENSMUST00000147081.9	ENSMUSG00000014767.18	Tbp	chr17	protein_coding	TATA box binding protein
chr17	15733883	15735878	+	15733883	15734492	3pMXE	0.5	50	50	ENSMUST00000119879.9	ENSMUSG00000014767.18	Tbp	chr17	protein_coding	TATA box binding protein
chr17	15721464	15723227	+	15721619	15723227	A5SS	0.33	50	50	ENSMUST00000155051.8	ENSMUSG00000014767.18	Tbp	chr17	protein_coding	TATA box binding protein
chr17	15720286	15721574	+	15721464	15721574	A5SS&ES	0.5	50	50	ENSMUST00000117593.8	ENSMUSG00000014767.18	Tbp	chr17	protein_coding	TATA box binding protein
chr17	15720286	15723227	+	15721619	15723227	A5SS&ES	0.33	50	50	ENSMUST00000117593.8	ENSMUSG00000014767.18	Tbp	chr17	protein_coding	TATA box binding protein
chr17	15742291	15743065	-	15740626	15743065	A3SS	0.5	50	50	ENSMUST00000154293.8	ENSMUSG00000014771.14	Pdcd2	chr17	protein_coding	programmed cell death 2
chr17	15745662	15746803	-	15745662	15746635	A5SS	0.5	50	50	ENSMUST00000154293.8	ENSMUSG00000014771.14	Pdcd2	chr17	protein_coding	programmed cell death 2
chr17	15746874	15747158	-	15746874	15747253	A5SS	0.5	50	50	ENSMUST00000154293.8	ENSMUSG00000014771.14	Pdcd2	chr17	protein_coding	programmed cell death 2
chr17	15777719;15777836	15777809;15779285	-	15777719	15779285	cassetteExon	0.5	100	100	ENSMUST00000167994.10	ENSMUSG00000051977.17	Prdm9	chr17	protein_coding	PR domain containing 9
chr17	15784160	15784498	-	15783593	15784498	A3SS	0.5	50	50	ENSMUST00000147532.8	ENSMUSG00000051977.17	Prdm9	chr17	protein_coding	PR domain containing 9
chr17	15852157	15853279	+	15852157;15852342	15852255;15853279	ES	0.5	50	50	ENSMUST00000231675.2	ENSMUSG00000116924.2	4933401D09Rik	chr17	lncRNA	RIKEN cDNA 4933401D09 gene
chr17	15978994	15980568	+	15978994	15980590	A3SS	0.5	50	50	ENSMUST00000024627.14	ENSMUSG00000023852.15	Chd1	chr17	protein_coding	chromodomain helicase DNA binding protein 1
chr17	15951301	15952116	+	15951279	15952116	A5SS	0.5	50	50	ENSMUST00000024627.14	ENSMUSG00000023852.15	Chd1	chr17	protein_coding	chromodomain helicase DNA binding protein 1
chr17	16041440	16044554	-	16041440	16046274	A5SS	0.5	50	50	ENSMUST00000170578.3	ENSMUSG00000048027.10	Rgmb	chr17	protein_coding	repulsive guidance molecule family member B
chr17	16050004	16050883	-	16049957	16050883	A3SS	0.5	50	50	ENSMUST00000231281.2	ENSMUSG00000048027.10	Rgmb	chr17	protein_coding	repulsive guidance molecule family member B
chr17	17171970;17191288	17191162;17191433	+	17171970	17191433	cassetteExon	0.5	100	100	ENSMUST00000190415.2	ENSMUSG00000060149.8	BC002059	chr17	lncRNA	cDNA sequence BC002059
chr17	17594932	17597981	+	17594932	17601074	A3SS	0.5	50	50	ENSMUST00000232199.2	ENSMUSG00000116564.2	Riok2	chr17	protein_coding	RIO kinase 2
chr17	17598861	17601074	+	17594932	17601074	A5SS	0.5	50	50	ENSMUST00000232199.2	ENSMUSG00000116564.2	Riok2	chr17	protein_coding	RIO kinase 2
chr17	17669399	17674522	+	17666325	17674522	A5SS	0.5	50	50	ENSMUST00000115576.3	ENSMUSG00000047786.13	Lix1	chr17	protein_coding	limb and CNS expressed 1
chr17	17799634;17829694	17829523;17844656	-	17799634	17844656	cassetteExon	0.5	100	100	ENSMUST00000041047.4	ENSMUSG00000023845.8	Lnpep	chr17	protein_coding	leucyl/cystinyl aminopeptidase
chr17	17795649	17795769	-	17795649	17798794	A5SS	0.33	50	50	ENSMUST00000041047.4	ENSMUSG00000023845.8	Lnpep	chr17	protein_coding	leucyl/cystinyl aminopeptidase
chr17	17795649	17799479	-	17795649	17798794	A5SS	0.33	50	50	ENSMUST00000041047.4	ENSMUSG00000023845.8	Lnpep	chr17	protein_coding	leucyl/cystinyl aminopeptidase
chr17	17795649	17799479	-	17795649	17795769	5pMXE	0.33	50	50	ENSMUST00000231291.2	ENSMUSG00000023845.8	Lnpep	chr17	protein_coding	leucyl/cystinyl aminopeptidase
chr17	17932595	17947033	+	17932595;17933749	17932943;17947033	ES	0.33	50	50	ENSMUST00000169805.3	ENSMUSG00000092120.3	Vmn2r90	chr17	protein_coding	vomeronasal 2, receptor 90
chr17	17924411	17932534	+	17924411	17932304	A3SS	0.33	50	50	ENSMUST00000169805.3	ENSMUSG00000092120.3	Vmn2r90	chr17	protein_coding	vomeronasal 2, receptor 90
chr17	17948415	17953525	+	17948415	17953498	A3SS	0.5	50	50	ENSMUST00000169805.3	ENSMUSG00000092120.3	Vmn2r90	chr17	protein_coding	vomeronasal 2, receptor 90
chr17	17924411;17932595	17932304;17947033	+	17924411	17947033	cassetteExon	0.5	100	100	ENSMUST00000231659.2	ENSMUSG00000092120.3	Vmn2r90	chr17	protein_coding	vomeronasal 2, receptor 90
chr17	17924411;17932595	17932534;17947033	+	17924411	17947033	cassetteExon	0.5	100	100	ENSMUST00000231659.2	ENSMUSG00000092120.3	Vmn2r90	chr17	protein_coding	vomeronasal 2, receptor 90
chr17	17933749	17947033	+	17924411	17947033	A5SS	0.33	50	50	ENSMUST00000231659.2	ENSMUSG00000092120.3	Vmn2r90	chr17	protein_coding	vomeronasal 2, receptor 90
chr17	17932595	17932943	+	17932595	17947033	A3SS	0.5	50	50	ENSMUST00000232113.2	ENSMUSG00000092120.3	Vmn2r90	chr17	protein_coding	vomeronasal 2, receptor 90
chr17	17933749	17947033	+	17932595	17947033	A5SS	0.33	50	50	ENSMUST00000232113.2	ENSMUSG00000092120.3	Vmn2r90	chr17	protein_coding	vomeronasal 2, receptor 90
chr17	18057848	18058349	+	18057848;18058031	18057927;18058349	ES	0.2	50	50	ENSMUST00000226899.2	ENSMUSG00000080316.12	Spaca6	chr17	protein_coding	sperm acrosome associated 6
chr17	18058788	18060041	+	18058788	18059247	3pMXE	0.5	50	50	ENSMUST00000226899.2	ENSMUSG00000080316.12	Spaca6	chr17	protein_coding	sperm acrosome associated 6
chr17	18052401	18052612	+	18052401	18056371	A3SS	0.33	50	50	ENSMUST00000226899.2	ENSMUSG00000080316.12	Spaca6	chr17	protein_coding	sperm acrosome associated 6
chr17	18052401	18056347	+	18052401	18056371	A3SS	0.33	50	50	ENSMUST00000226899.2	ENSMUSG00000080316.12	Spaca6	chr17	protein_coding	sperm acrosome associated 6
chr17	18057848	18057932	+	18057848	18057927	A3SS	0.33	50	50	ENSMUST00000226899.2	ENSMUSG00000080316.12	Spaca6	chr17	protein_coding	sperm acrosome associated 6
chr17	18058505	18058601	+	18058505	18058578	A3SS	0.5	50	50	ENSMUST00000226899.2	ENSMUSG00000080316.12	Spaca6	chr17	protein_coding	sperm acrosome associated 6
chr17	18051120	18051336	+	18047589	18051336	A5SS	0.5	50	50	ENSMUST00000226899.2	ENSMUSG00000080316.12	Spaca6	chr17	protein_coding	sperm acrosome associated 6
chr17	18051868	18052321	+	18051524	18052321	A5SS	0.5	50	50	ENSMUST00000226899.2	ENSMUSG00000080316.12	Spaca6	chr17	protein_coding	sperm acrosome associated 6
chr17	18058033	18058349	+	18058031	18058349	A5SS	0.2	50	50	ENSMUST00000226899.2	ENSMUSG00000080316.12	Spaca6	chr17	protein_coding	sperm acrosome associated 6
chr17	18047589	18051336	+	18047589	18058349	A3SS	0.5	50	50	ENSMUST00000228490.2	ENSMUSG00000080316.12	Spaca6	chr17	protein_coding	sperm acrosome associated 6
chr17	18057006	18058349	+	18047589	18058349	A5SS	0.2	50	50	ENSMUST00000228490.2	ENSMUSG00000080316.12	Spaca6	chr17	protein_coding	sperm acrosome associated 6
chr17	18057848	18058349	+	18047589	18058349	A5SS	0.2	50	50	ENSMUST00000228490.2	ENSMUSG00000080316.12	Spaca6	chr17	protein_coding	sperm acrosome associated 6
chr17	18058031	18058349	+	18047589	18058349	A5SS	0.2	50	50	ENSMUST00000228490.2	ENSMUSG00000080316.12	Spaca6	chr17	protein_coding	sperm acrosome associated 6
chr17	18058033	18058349	+	18047589	18058349	A5SS	0.2	50	50	ENSMUST00000228490.2	ENSMUSG00000080316.12	Spaca6	chr17	protein_coding	sperm acrosome associated 6
chr17	18052401	18056347	+	18052401	18052612	3pMXE	0.33	50	50	ENSMUST00000133912.8	ENSMUSG00000080316.12	Spaca6	chr17	protein_coding	sperm acrosome associated 6
chr17	18057848	18058349	+	18057848;18058033	18057927;18058349	ES	0.25	50	50	ENSMUST00000172097.9	ENSMUSG00000080316.12	Spaca6	chr17	protein_coding	sperm acrosome associated 6
chr17	18057006;18057848	18057771;18058349	+	18057006	18058349	cassetteExon	0.5	100	100	ENSMUST00000177859.8	ENSMUSG00000080316.12	Spaca6	chr17	protein_coding	sperm acrosome associated 6
chr17	18057006;18058031	18057771;18058349	+	18057006	18058349	cassetteExon	0.5	100	100	ENSMUST00000177859.8	ENSMUSG00000080316.12	Spaca6	chr17	protein_coding	sperm acrosome associated 6
chr17	18057006;18058033	18057771;18058349	+	18057006	18058349	cassetteExon	0.5	100	100	ENSMUST00000177859.8	ENSMUSG00000080316.12	Spaca6	chr17	protein_coding	sperm acrosome associated 6
chr17	18057848	18058349	+	18057848;18058031	18057932;18058349	ES	0.25	50	50	ENSMUST00000012759.14	ENSMUSG00000080316.12	Spaca6	chr17	protein_coding	sperm acrosome associated 6
chr17	18057848	18058349	+	18057848	18057927	3pMXE	0.33	50	50	ENSMUST00000150302.2	ENSMUSG00000080316.12	Spaca6	chr17	protein_coding	sperm acrosome associated 6
chr17	18057848;18058033	18057932;18058349	+	18057848	18058349	cassetteExon	0.5	100	100	ENSMUST00000155293.8	ENSMUSG00000080316.12	Spaca6	chr17	protein_coding	sperm acrosome associated 6
chr17	18057006	18058349	+	18057848	18058349	5pMXE	0.2	50	50	ENSMUST00000052338.10	ENSMUSG00000080316.12	Spaca6	chr17	protein_coding	sperm acrosome associated 6
chr17	18057006	18058349	+	18058031	18058349	5pMXE	0.2	50	50	ENSMUST00000154301.2	ENSMUSG00000080316.12	Spaca6	chr17	protein_coding	sperm acrosome associated 6
chr17	18057848	18058349	+	18058031	18058349	5pMXE	0.2	50	50	ENSMUST00000154301.2	ENSMUSG00000080316.12	Spaca6	chr17	protein_coding	sperm acrosome associated 6
chr17	18108161	18190720	+	18108161	18112995	3pMXE	0.5	50	50	ENSMUST00000064068.5	ENSMUSG00000052270.8	Fpr2	chr17	protein_coding	formyl peptide receptor 2
chr17	18282489	18283465	+	18282489	18282824	A3SS	0.5	50	50	ENSMUST00000176802.3	ENSMUSG00000094396.4	Vmn2r124	chr17	protein_coding	vomeronasal 2, receptor 124
chr17	18269971	18282195	+	18269966	18282195	A5SS	0.5	50	50	ENSMUST00000176802.3	ENSMUSG00000094396.4	Vmn2r124	chr17	protein_coding	vomeronasal 2, receptor 124
chr17	18478647;18480665	18480281;18497673	-	18478647	18497673	cassetteExon	0.5	100	100	ENSMUST00000172190.4	ENSMUSG00000090417.5	Vmn2r94	chr17	protein_coding	vomeronasal 2, receptor 94
chr17	18469157	18476295	-	18473623	18476295	A3SS&ES	0.5	50	50	ENSMUST00000172190.4	ENSMUSG00000090417.5	Vmn2r94	chr17	protein_coding	vomeronasal 2, receptor 94
chr17	18497531	18497673	-	18478647	18497673	A3SS	0.33	50	50	ENSMUST00000172190.4	ENSMUSG00000090417.5	Vmn2r94	chr17	protein_coding	vomeronasal 2, receptor 94
chr17	18497531	18497673	-	18480665	18497673	A3SS	0.33	50	50	ENSMUST00000231457.2	ENSMUSG00000090417.5	Vmn2r94	chr17	protein_coding	vomeronasal 2, receptor 94
chr17	18536963	18545775	+	18536963	18541055	3pMXE	0.5	50	50	ENSMUST00000231938.2	ENSMUSG00000079698.8	Vmn2r93	chr17	protein_coding	vomeronasal 2, receptor 93
chr17	18533618	18545662	+	18533618	18536840	A3SS&ES	0.5	50	50	ENSMUST00000079206.8	ENSMUSG00000079698.8	Vmn2r93	chr17	protein_coding	vomeronasal 2, receptor 93
chr17	18660894	18664088	+	18660894;18661776	18661561;18664088	ES	0.5	50	50	ENSMUST00000166327.3	ENSMUSG00000091631.3	Vmn2r95	chr17	protein_coding	vomeronasal 2, receptor 95
chr17	18664211	18671694	+	18664211	18671653	A3SS	0.5	50	50	ENSMUST00000166327.3	ENSMUSG00000091631.3	Vmn2r95	chr17	protein_coding	vomeronasal 2, receptor 95
chr17	18793875	18802143	+	18793875	18801979	A3SS	0.5	50	50	ENSMUST00000177244.4	ENSMUSG00000091679.10	Vmn2r96	chr17	protein_coding	vomeronasal 2, receptor 96
chr17	19150687	19160400	+	19150687	19151762	3pMXE	0.5	50	50	ENSMUST00000232325.2	ENSMUSG00000091491.3	Vmn2r97	chr17	protein_coding	vomeronasal 2, receptor 97
chr17	19160523	19176532	+	19160523	19167405	A3SS	0.5	50	50	ENSMUST00000168710.3	ENSMUSG00000091491.3	Vmn2r97	chr17	protein_coding	vomeronasal 2, receptor 97
chr17	19602888;19612747	19612621;19613924	+	19602888	19613924	cassetteExon	0.5	100	100	ENSMUST00000176107.3	ENSMUSG00000090304.5	Vmn2r99	chr17	protein_coding	vomeronasal 2, receptor 99
chr17	19743673	19746178	+	19743862	19746178	A5SS	0.5	50	50	ENSMUST00000166081.3	ENSMUSG00000091859.3	Vmn2r100	chr17	protein_coding	vomeronasal 2, receptor 100
chr17	20262606	20262938	-	20262606	20262757	5pMXE	0.5	50	50	ENSMUST00000233647.2	ENSMUSG00000090315.3	Vmn2r104	chr17	protein_coding	vomeronasal 2, receptor 104
chr17	20446683	20448654	-	20446683;20448300	20447509;20448654	ES	0.5	50	50	ENSMUST00000233461.3	ENSMUSG00000091670.4	Vmn2r105	chr17	protein_coding	vomeronasal 2, receptor 105
chr17	20424474	20444837	-	20429420	20444837	A3SS	0.33	50	50	ENSMUST00000233461.3	ENSMUSG00000091670.4	Vmn2r105	chr17	protein_coding	vomeronasal 2, receptor 105
chr17	20430653	20444837	-	20429420	20444837	A3SS	0.33	50	50	ENSMUST00000233461.3	ENSMUSG00000091670.4	Vmn2r105	chr17	protein_coding	vomeronasal 2, receptor 105
chr17	20448300	20448654	-	20446683	20448654	A3SS	0.5	50	50	ENSMUST00000233468.3	ENSMUSG00000091670.4	Vmn2r105	chr17	protein_coding	vomeronasal 2, receptor 105
chr17	20446683	20447509	-	20446683	20448654	A5SS	0.5	50	50	ENSMUST00000233468.3	ENSMUSG00000091670.4	Vmn2r105	chr17	protein_coding	vomeronasal 2, receptor 105
chr17	20446524	20446621	-	20446524	20446615	A5SS	0.5	50	50	ENSMUST00000232768.3	ENSMUSG00000091670.4	Vmn2r105	chr17	protein_coding	vomeronasal 2, receptor 105
chr17	20430653	20444837	-	20424474	20444837	A3SS	0.33	50	50	ENSMUST00000232803.3	ENSMUSG00000091670.4	Vmn2r105	chr17	protein_coding	vomeronasal 2, receptor 105
chr17	20499844	20505472	-	20500012	20505472	A3SS	0.5	50	50	ENSMUST00000167464.3	ENSMUSG00000091656.3	Vmn2r106	chr17	protein_coding	vomeronasal 2, receptor 106
chr17	20497917	20499106	-	20497917	20498590	A5SS	0.5	50	50	ENSMUST00000167464.3	ENSMUSG00000091656.3	Vmn2r106	chr17	protein_coding	vomeronasal 2, receptor 106
chr17	20565907;20576368	20576243;20576520	+	20565907;20576187	20575893;20576520	MXE	0.5	100	100	ENSMUST00000042090.8	ENSMUSG00000056910.6	Vmn2r107	chr17	protein_coding	vomeronasal 2, receptor 107
chr17	20565907	20576243	+	20565907	20575893	A3SS	0.5	50	50	ENSMUST00000233836.2	ENSMUSG00000056910.6	Vmn2r107	chr17	protein_coding	vomeronasal 2, receptor 107
chr17	20576187	20576520	+	20576368	20576520	A5SS	0.5	50	50	ENSMUST00000233836.2	ENSMUSG00000056910.6	Vmn2r107	chr17	protein_coding	vomeronasal 2, receptor 107
chr17	20636795	20639609	+	20636795	20639290	A3SS	0.25	50	50	ENSMUST00000233980.2	ENSMUSG00000091151.3	Vmn1r224	chr17	protein_coding	vomeronasal 1 receptor 224
chr17	20636795	20640024	+	20636795	20639290	A3SS	0.25	50	50	ENSMUST00000233980.2	ENSMUSG00000091151.3	Vmn1r224	chr17	protein_coding	vomeronasal 1 receptor 224
chr17	20636795	20640027	+	20636795	20639290	A3SS	0.25	50	50	ENSMUST00000233980.2	ENSMUSG00000091151.3	Vmn1r224	chr17	protein_coding	vomeronasal 1 receptor 224
chr17	20634919	20636702	+	20634714	20636702	A5SS	0.5	50	50	ENSMUST00000233980.2	ENSMUSG00000091151.3	Vmn1r224	chr17	protein_coding	vomeronasal 1 receptor 224
chr17	20636795	20640024	+	20636795	20639609	A3SS	0.25	50	50	ENSMUST00000233743.2	ENSMUSG00000091151.3	Vmn1r224	chr17	protein_coding	vomeronasal 1 receptor 224
chr17	20636795	20640027	+	20636795	20639609	A3SS	0.25	50	50	ENSMUST00000233743.2	ENSMUSG00000091151.3	Vmn1r224	chr17	protein_coding	vomeronasal 1 receptor 224
chr17	20636795	20640027	+	20636795	20640024	A3SS	0.25	50	50	ENSMUST00000233161.2	ENSMUSG00000091151.3	Vmn1r224	chr17	protein_coding	vomeronasal 1 receptor 224
chr17	20683554	20690307	-	20683554;20689429	20689306;20690307	ES	0.5	50	50	ENSMUST00000167314.3	ENSMUSG00000091805.3	Vmn2r108	chr17	protein_coding	vomeronasal 2, receptor 108
chr17	20689429	20691214	-	20689429;20690522	20690307;20691214	ES	0.33	50	50	ENSMUST00000167314.3	ENSMUSG00000091805.3	Vmn2r108	chr17	protein_coding	vomeronasal 2, receptor 108
chr17	20690414	20691214	-	20690522	20691214	A3SS	0.33	50	50	ENSMUST00000167314.3	ENSMUSG00000091805.3	Vmn2r108	chr17	protein_coding	vomeronasal 2, receptor 108
chr17	20691674	20692339	-	20692005	20692339	A3SS	0.5	50	50	ENSMUST00000167314.3	ENSMUSG00000091805.3	Vmn2r108	chr17	protein_coding	vomeronasal 2, receptor 108
chr17	20689429	20691214	-	20689429;20690414	20690307;20691214	ES	0.33	50	50	ENSMUST00000232850.2	ENSMUSG00000091805.3	Vmn2r108	chr17	protein_coding	vomeronasal 2, receptor 108
chr17	20683554;20690414	20690307;20691214	-	20683554;20689429	20689306;20691214	MXE	0.5	100	100	ENSMUST00000233382.2	ENSMUSG00000091805.3	Vmn2r108	chr17	protein_coding	vomeronasal 2, receptor 108
chr17	20683554;20690522	20690307;20691214	-	20683554;20689429	20689306;20691214	MXE	0.5	100	100	ENSMUST00000233382.2	ENSMUSG00000091805.3	Vmn2r108	chr17	protein_coding	vomeronasal 2, receptor 108
chr17	20718534	20722745	+	20718534	20722540	A3SS	0.5	50	50	ENSMUST00000233982.2	ENSMUSG00000043537.3	Vmn1r225	chr17	protein_coding	vomeronasal 1 receptor 225
chr17	20804697;20806350	20806057;20816301	-	20804697	20816301	cassetteExon	0.5	100	100	ENSMUST00000169559.3	ENSMUSG00000091259.3	Vmn2r110	chr17	protein_coding	vomeronasal 2, receptor 110
chr17	20803994	20804403	-	20804057	20804403	A3SS	0.5	50	50	ENSMUST00000169559.3	ENSMUSG00000091259.3	Vmn2r110	chr17	protein_coding	vomeronasal 2, receptor 110
chr17	20903442	20903740	+	20903442	20903734	A3SS	0.5	50	50	ENSMUST00000232708.2	ENSMUSG00000042848.5	Vmn1r226	chr17	protein_coding	vomeronasal 1 receptor 226
chr17	20903939	20907600	+	20903939	20907394	A3SS	0.33	50	50	ENSMUST00000232708.2	ENSMUSG00000042848.5	Vmn1r226	chr17	protein_coding	vomeronasal 1 receptor 226
chr17	20903939	20907671	+	20903939	20907394	A3SS	0.33	50	50	ENSMUST00000232708.2	ENSMUSG00000042848.5	Vmn1r226	chr17	protein_coding	vomeronasal 1 receptor 226
chr17	20903939	20907600	+	20903939	20907671	A3SS	0.33	50	50	ENSMUST00000233808.2	ENSMUSG00000042848.5	Vmn1r226	chr17	protein_coding	vomeronasal 1 receptor 226
chr17	20953079	20957217	+	20953079	20955317	A3SS	0.5	50	50	ENSMUST00000233597.2	ENSMUSG00000067951.6	Vmn1r227	chr17	protein_coding	vomeronasal 1 receptor 227
chr17	20950301	20953017	+	20950351	20953017	A5SS	0.33	50	50	ENSMUST00000233597.2	ENSMUSG00000067951.6	Vmn1r227	chr17	protein_coding	vomeronasal 1 receptor 227
chr17	20950591	20953017	+	20950351	20953017	A5SS	0.33	50	50	ENSMUST00000233597.2	ENSMUSG00000067951.6	Vmn1r227	chr17	protein_coding	vomeronasal 1 receptor 227
chr17	20950301	20953017	+	20950591	20953017	A5SS	0.33	50	50	ENSMUST00000232943.2	ENSMUSG00000067951.6	Vmn1r227	chr17	protein_coding	vomeronasal 1 receptor 227
chr17	20998494	20999224	-	20998494	20999270	A5SS	0.5	50	50	ENSMUST00000233605.2	ENSMUSG00000060245.6	Vmn1r228	chr17	protein_coding	vomeronasal 1 receptor 228
chr17	20999347	21006030	-	20999347	21006007	A5SS	0.5	50	50	ENSMUST00000233605.2	ENSMUSG00000060245.6	Vmn1r228	chr17	protein_coding	vomeronasal 1 receptor 228
chr17	21032044	21034604	+	21032103	21034604	A5SS	0.5	50	50	ENSMUST00000232810.2	ENSMUSG00000117148.2	Vmn1r229	chr17	protein_coding	vomeronasal 1 receptor 229
chr17	21060808	21065214	+	21060808	21065051	A3SS	0.33	50	50	ENSMUST00000232909.2	ENSMUSG00000045417.3	Vmn1r230	chr17	protein_coding	vomeronasal 1 receptor 230
chr17	21060808	21065289	+	21060808	21065051	A3SS	0.33	50	50	ENSMUST00000232909.2	ENSMUSG00000045417.3	Vmn1r230	chr17	protein_coding	vomeronasal 1 receptor 230
chr17	21060808	21065214	+	21060808	21065289	A3SS	0.33	50	50	ENSMUST00000233670.2	ENSMUSG00000045417.3	Vmn1r230	chr17	protein_coding	vomeronasal 1 receptor 230
chr17	21113948	21165287	-	21113948	21124992	5pMXE	0.5	50	50	ENSMUST00000235948.2	ENSMUSG00000050933.5	Vmn1r231	chr17	protein_coding	vomeronasal 1 receptor 231
chr17	21112357;21112559	21112453;21113591	-	21112357	21113591	cassetteExon	0.5	100	100	ENSMUST00000235948.2	ENSMUSG00000050933.5	Vmn1r231	chr17	protein_coding	vomeronasal 1 receptor 231
chr17	21110716	21112289	-	21111178	21112289	A3SS	0.5	50	50	ENSMUST00000235948.2	ENSMUSG00000050933.5	Vmn1r231	chr17	protein_coding	vomeronasal 1 receptor 231
chr17	21135035;21139734	21139616;21139866	-	21135035	21139866	cassetteExon	0.5	100	100	ENSMUST00000237554.2	ENSMUSG00000062165.4	Vmn1r232	chr17	protein_coding	vomeronasal 1 receptor 232
chr17	21146848	21147099	+	21146617	21147099	A5SS	0.5	50	50	ENSMUST00000237719.2	ENSMUSG00000067949.6	Vmn1r-ps144	chr17	transcribed_unprocessed_pseudogene	vomeronasal 1 receptor, pseudogene 144
chr17	21177374	21179090	+	21177374	21178982	A3SS	0.5	50	50	ENSMUST00000007708.14	ENSMUSG00000007564.16	Ppp2r1a	chr17	protein_coding	protein phosphatase 2, regulatory subunit A, alpha
chr17	21185628	21185717	+	21185592	21185717	A5SS	0.5	50	50	ENSMUST00000007708.14	ENSMUSG00000007564.16	Ppp2r1a	chr17	protein_coding	protein phosphatase 2, regulatory subunit A, alpha
chr17	21241096	21245723	+	21241096	21261685	A3SS	0.33	50	50	ENSMUST00000232473.2	ENSMUSG00000067942.7	Zfp160	chr17	protein_coding	zinc finger protein 160
chr17	21241096	21255425	+	21241096	21261685	A3SS	0.33	50	50	ENSMUST00000232473.2	ENSMUSG00000067942.7	Zfp160	chr17	protein_coding	zinc finger protein 160
chr17	21229370	21231938	+	21229248	21231938	A5SS	0.5	50	50	ENSMUST00000232473.2	ENSMUSG00000067942.7	Zfp160	chr17	protein_coding	zinc finger protein 160
chr17	21232034	21240334	+	21232039	21240334	A5SS	0.33	50	50	ENSMUST00000232473.2	ENSMUSG00000067942.7	Zfp160	chr17	protein_coding	zinc finger protein 160
chr17	21239151	21240334	+	21232039	21240334	A5SS	0.33	50	50	ENSMUST00000232473.2	ENSMUSG00000067942.7	Zfp160	chr17	protein_coding	zinc finger protein 160
chr17	21232034	21240334	+	21232034;21239151	21239091;21240334	ES	0.33	50	50	ENSMUST00000231482.2	ENSMUSG00000067942.7	Zfp160	chr17	protein_coding	zinc finger protein 160
chr17	21232034	21232669	+	21232034	21239091	A3SS	0.33	50	50	ENSMUST00000231482.2	ENSMUSG00000067942.7	Zfp160	chr17	protein_coding	zinc finger protein 160
chr17	21241096	21255425	+	21241096	21245723	3pMXE	0.33	50	50	ENSMUST00000088811.7	ENSMUSG00000067942.7	Zfp160	chr17	protein_coding	zinc finger protein 160
chr17	21232034	21232669	+	21232034	21240334	A3SS	0.33	50	50	ENSMUST00000088811.7	ENSMUSG00000067942.7	Zfp160	chr17	protein_coding	zinc finger protein 160
chr17	21446774	21449783	+	21446774	21447977	A3SS	0.5	50	50	ENSMUST00000235895.2	ENSMUSG00000057203.4	Vmn1r234	chr17	protein_coding	vomeronasal 1 receptor 234
chr17	21478464;21480978	21480920;21481716	+	21478464	21481716	cassetteExon	0.5	100	100	ENSMUST00000235270.2	ENSMUSG00000050102.7	Vmn1r235	chr17	protein_coding	vomeronasal 1 receptor 235
chr17	21478464	21481635	+	21478464	21481716	A3SS	0.33	50	50	ENSMUST00000235270.2	ENSMUSG00000050102.7	Vmn1r235	chr17	protein_coding	vomeronasal 1 receptor 235
chr17	21478553	21481716	+	21478464	21481716	A5SS	0.33	50	50	ENSMUST00000235270.2	ENSMUSG00000050102.7	Vmn1r235	chr17	protein_coding	vomeronasal 1 receptor 235
chr17	21478464;21480978	21480920;21481635	+	21478464	21481635	cassetteExon	0.5	100	100	ENSMUST00000236212.2	ENSMUSG00000050102.7	Vmn1r235	chr17	protein_coding	vomeronasal 1 receptor 235
chr17	21478553	21481635	+	21478464	21481635	A5SS	0.33	50	50	ENSMUST00000236212.2	ENSMUSG00000050102.7	Vmn1r235	chr17	protein_coding	vomeronasal 1 receptor 235
chr17	21478553;21480978	21480920;21481635	+	21478553	21481635	cassetteExon	0.5	100	100	ENSMUST00000236821.2	ENSMUSG00000050102.7	Vmn1r235	chr17	protein_coding	vomeronasal 1 receptor 235
chr17	21478553	21481716	+	21478553	21481635	A3SS	0.33	50	50	ENSMUST00000236821.2	ENSMUSG00000050102.7	Vmn1r235	chr17	protein_coding	vomeronasal 1 receptor 235
chr17	21478553;21480978	21480920;21481716	+	21478553	21481716	cassetteExon	0.5	100	100	ENSMUST00000237540.2	ENSMUSG00000050102.7	Vmn1r235	chr17	protein_coding	vomeronasal 1 receptor 235
chr17	21478553	21481635	+	21478553	21480920	A3SS&ES	0.33	50	50	ENSMUST00000237810.2	ENSMUSG00000050102.7	Vmn1r235	chr17	protein_coding	vomeronasal 1 receptor 235
chr17	21480978	21481635	+	21480978	21481716	A3SS	0.5	50	50	ENSMUST00000237810.2	ENSMUSG00000050102.7	Vmn1r235	chr17	protein_coding	vomeronasal 1 receptor 235
chr17	21478464	21480920	+	21478553	21480920	A5SS	0.5	50	50	ENSMUST00000237810.2	ENSMUSG00000050102.7	Vmn1r235	chr17	protein_coding	vomeronasal 1 receptor 235
chr17	21478464	21481716	+	21480978	21481716	A5SS&ES	0.33	50	50	ENSMUST00000237810.2	ENSMUSG00000050102.7	Vmn1r235	chr17	protein_coding	vomeronasal 1 receptor 235
chr17	21478464	21481635	+	21478464	21480920	A3SS&ES	0.33	50	50	ENSMUST00000236183.2	ENSMUSG00000050102.7	Vmn1r235	chr17	protein_coding	vomeronasal 1 receptor 235
chr17	21478553	21481716	+	21480978	21481716	A5SS&ES	0.33	50	50	ENSMUST00000236183.2	ENSMUSG00000050102.7	Vmn1r235	chr17	protein_coding	vomeronasal 1 receptor 235
chr17	21478464	21481635	+	21480978	21481635	5pMXE	0.33	50	50	ENSMUST00000060603.5	ENSMUSG00000050102.7	Vmn1r235	chr17	protein_coding	vomeronasal 1 receptor 235
chr17	21478553	21481635	+	21480978	21481635	5pMXE	0.33	50	50	ENSMUST00000060603.5	ENSMUSG00000050102.7	Vmn1r235	chr17	protein_coding	vomeronasal 1 receptor 235
chr17	21503404	21508404	+	21503404;21506983	21506898;21508404	ES	0.5	50	50	ENSMUST00000235320.2	ENSMUSG00000054142.6	Vmn1r236	chr17	protein_coding	vomeronasal 1 receptor 236
chr17	21503404	21506943	+	21503404	21506898	A3SS	0.33	50	50	ENSMUST00000235320.2	ENSMUSG00000054142.6	Vmn1r236	chr17	protein_coding	vomeronasal 1 receptor 236
chr17	21503404;21506983	21506943;21508404	+	21503404	21508404	cassetteExon	0.5	100	100	ENSMUST00000236535.2	ENSMUSG00000054142.6	Vmn1r236	chr17	protein_coding	vomeronasal 1 receptor 236
chr17	21503404	21508404	+	21503404	21506943	A3SS	0.33	50	50	ENSMUST00000236545.2	ENSMUSG00000054142.6	Vmn1r236	chr17	protein_coding	vomeronasal 1 receptor 236
chr17	21503404	21508404	+	21503404	21506898	A3SS	0.33	50	50	ENSMUST00000235527.2	ENSMUSG00000054142.6	Vmn1r236	chr17	protein_coding	vomeronasal 1 receptor 236
chr17	21604282	21612723	+	21604282	21612728	A3SS	0.5	50	50	ENSMUST00000056107.11	ENSMUSG00000062743.10	Zfp677	chr17	protein_coding	zinc finger protein 677
chr17	21643823	21647999	+	21643823;21647633	21647594;21647999	ES	0.33	50	50	ENSMUST00000165230.8	ENSMUSG00000023882.16	Zfp54	chr17	protein_coding	zinc finger protein 54
chr17	21643579	21647999	+	21647633	21647999	A5SS&ES	0.33	50	50	ENSMUST00000165230.8	ENSMUSG00000023882.16	Zfp54	chr17	protein_coding	zinc finger protein 54
chr17	21643579	21647999	+	21643823	21647999	A5SS	0.33	50	50	ENSMUST00000007884.15	ENSMUSG00000023882.16	Zfp54	chr17	protein_coding	zinc finger protein 54
chr17	21848247;21848565	21848369;21849756	+	21848247	21849756	cassetteExon	0.5	100	100	ENSMUST00000232793.2	ENSMUSG00000117013.2	Gm30531	chr17	transcribed_processed_pseudogene	predicted gene, 30531
chr17	21849912	21851761	+	21849912	21871187	A3SS	0.5	50	50	ENSMUST00000232793.2	ENSMUSG00000117013.2	Gm30531	chr17	transcribed_processed_pseudogene	predicted gene, 30531
chr17	21871265	21875095	+	21871265	21875012	A3SS	0.5	50	50	ENSMUST00000232793.2	ENSMUSG00000117013.2	Gm30531	chr17	transcribed_processed_pseudogene	predicted gene, 30531
chr17	21869793	21871187	+	21849912	21871187	A5SS	0.5	50	50	ENSMUST00000232793.2	ENSMUSG00000117013.2	Gm30531	chr17	transcribed_processed_pseudogene	predicted gene, 30531
chr17	21962938	21988274	+	21962938	21964028	3pMXE	0.5	50	50	ENSMUST00000182827.8	ENSMUSG00000061544.14	Zfp229	chr17	protein_coding	zinc finger protein 229
chr17	21952939	21955039	+	21950032	21955039	A5SS	0.25	50	50	ENSMUST00000182827.8	ENSMUSG00000061544.14	Zfp229	chr17	protein_coding	zinc finger protein 229
chr17	21953720	21955039	+	21950032	21955039	A5SS	0.25	50	50	ENSMUST00000182827.8	ENSMUSG00000061544.14	Zfp229	chr17	protein_coding	zinc finger protein 229
chr17	21954916	21955039	+	21950032	21955039	A5SS	0.25	50	50	ENSMUST00000182827.8	ENSMUSG00000061544.14	Zfp229	chr17	protein_coding	zinc finger protein 229
chr17	21952939	21955039	+	21952939;21953720	21953602;21955039	ES	0.33	50	50	ENSMUST00000182334.2	ENSMUSG00000061544.14	Zfp229	chr17	protein_coding	zinc finger protein 229
chr17	21952939	21953780	+	21952939	21953602	A3SS&ES	0.33	50	50	ENSMUST00000182334.2	ENSMUSG00000061544.14	Zfp229	chr17	protein_coding	zinc finger protein 229
chr17	21954916	21955039	+	21953720	21955039	A5SS	0.33	50	50	ENSMUST00000182334.2	ENSMUSG00000061544.14	Zfp229	chr17	protein_coding	zinc finger protein 229
chr17	21952939	21955039	+	21952939	21953780	3pMXE	0.33	50	50	ENSMUST00000182923.2	ENSMUSG00000061544.14	Zfp229	chr17	protein_coding	zinc finger protein 229
chr17	21954916	21955039	+	21952939	21955039	A5SS	0.25	50	50	ENSMUST00000065871.14	ENSMUSG00000061544.14	Zfp229	chr17	protein_coding	zinc finger protein 229
chr17	22042872	22059586	-	22042872	22059605	A5SS	0.5	50	50	ENSMUST00000084141.6	ENSMUSG00000069743.6	Zfp820	chr17	protein_coding	zinc finger protein 820
chr17	22111803	22127030	-	22106339	22127030	A3SS	0.33	50	50	ENSMUST00000106026.3	ENSMUSG00000078546.9	Zfp995	chr17	protein_coding	zinc finger protein 995
chr17	22123562	22127030	-	22106339	22127030	A3SS	0.33	50	50	ENSMUST00000106026.3	ENSMUSG00000078546.9	Zfp995	chr17	protein_coding	zinc finger protein 995
chr17	22123562	22127030	-	22111803	22127030	A3SS	0.5	50	50	ENSMUST00000189719.2	ENSMUSG00000078546.9	Zfp995	chr17	protein_coding	zinc finger protein 995
chr17	22111803	22122356	-	22111803	22127030	A5SS	0.5	50	50	ENSMUST00000189719.2	ENSMUSG00000078546.9	Zfp995	chr17	protein_coding	zinc finger protein 995
chr17	22209886	22225287	+	22209886	22211073	3pMXE	0.5	50	50	ENSMUST00000055349.15	ENSMUSG00000053347.16	Zfp943	chr17	protein_coding	zinc finger prtoein 943
chr17	22580688	22592624	+	22580688;22591069	22590972;22592624	ES	0.5	50	50	ENSMUST00000088765.9	ENSMUSG00000044501.18	Zfp758	chr17	protein_coding	zinc finger protein 758
chr17	22580688	22591017	+	22580688	22590972	A3SS	0.33	50	50	ENSMUST00000088765.9	ENSMUSG00000044501.18	Zfp758	chr17	protein_coding	zinc finger protein 758
chr17	22580688;22591069	22591017;22592624	+	22580688	22592624	cassetteExon	0.5	100	100	ENSMUST00000149699.8	ENSMUSG00000044501.18	Zfp758	chr17	protein_coding	zinc finger protein 758
chr17	22647546;22663272	22663149;22665778	+	22647546	22665778	cassetteExon	0.5	100	100	ENSMUST00000141831.8	ENSMUSG00000071266.14	Zfp946	chr17	protein_coding	zinc finger protein 946
chr17	22665874	22670060	+	22665874	22670078	A3SS	0.5	50	50	ENSMUST00000120222.8	ENSMUSG00000071266.14	Zfp946	chr17	protein_coding	zinc finger protein 946
chr17	22767841	22787820	-	22767841;22778147	22778024;22787820	ES	0.33	50	50	ENSMUST00000092491.7	ENSMUSG00000095093.3	Vmn2r111	chr17	protein_coding	vomeronasal 2, receptor 111
chr17	22767841;22783558	22783420;22787820	-	22767841;22778147	22778024;22787820	MXE	0.5	100	100	ENSMUST00000092491.7	ENSMUSG00000095093.3	Vmn2r111	chr17	protein_coding	vomeronasal 2, receptor 111
chr17	22787927	22789703	-	22788047	22789703	A3SS	0.5	50	50	ENSMUST00000092491.7	ENSMUSG00000095093.3	Vmn2r111	chr17	protein_coding	vomeronasal 2, receptor 111
chr17	22767841	22787820	-	22767841;22783558	22783420;22787820	ES	0.33	50	50	ENSMUST00000234223.2	ENSMUSG00000095093.3	Vmn2r111	chr17	protein_coding	vomeronasal 2, receptor 111
chr17	22824118	22833864	+	22824276	22833864	A5SS	0.33	50	50	ENSMUST00000097381.5	ENSMUSG00000094921.3	Vmn2r112	chr17	protein_coding	vomeronasal 2, receptor 112
chr17	22824228	22833864	+	22824276	22833864	A5SS	0.33	50	50	ENSMUST00000097381.5	ENSMUSG00000094921.3	Vmn2r112	chr17	protein_coding	vomeronasal 2, receptor 112
chr17	22824118	22833864	+	22824228	22833864	A5SS	0.33	50	50	ENSMUST00000234882.2	ENSMUSG00000094921.3	Vmn2r112	chr17	protein_coding	vomeronasal 2, receptor 112
chr17	23080535	23084221	-	23080535;23080826	23080706;23084221	ES	0.5	50	50	ENSMUST00000160457.10	ENSMUSG00000059142.17	Zfp945	chr17	protein_coding	zinc finger protein 945
chr17	23167151	23174323	+	23167151	23174918	A3SS	0.5	50	50	ENSMUST00000170322.3	ENSMUSG00000092111.3	Vmn2r113	chr17	protein_coding	vomeronasal 2, receptor 113
chr17	23165543	23166924	+	23165696	23166924	A5SS	0.5	50	50	ENSMUST00000170322.3	ENSMUSG00000092111.3	Vmn2r113	chr17	protein_coding	vomeronasal 2, receptor 113
chr17	23410482	23410651	-	23410409	23410651	A3SS	0.5	50	50	ENSMUST00000037057.14	ENSMUSG00000002617.15	Zfp40	chr17	protein_coding	zinc finger protein 40
chr17	23521041	23527004	-	23515962	23527004	A3SS	0.5	50	50	ENSMUST00000168033.3	ENSMUSG00000091945.3	Vmn2r114	chr17	protein_coding	vomeronasal 2, receptor 114
chr17	23515962	23517840	-	23515962	23527004	A5SS	0.5	50	50	ENSMUST00000168033.3	ENSMUSG00000091945.3	Vmn2r114	chr17	protein_coding	vomeronasal 2, receptor 114
chr17	23515962	23527004	-	23515962;23521041	23517840;23527004	ES	0.5	50	50	ENSMUST00000234493.2	ENSMUSG00000091945.3	Vmn2r114	chr17	protein_coding	vomeronasal 2, receptor 114
chr17	23567019	23578183	+	23567019;23576057	23575934;23578183	ES	0.5	50	50	ENSMUST00000168175.3	ENSMUSG00000091076.3	Vmn2r115	chr17	protein_coding	vomeronasal 2, receptor 115
chr17	23567019	23578183	+	23576057	23578183	A5SS	0.5	50	50	ENSMUST00000234552.2	ENSMUSG00000091076.3	Vmn2r115	chr17	protein_coding	vomeronasal 2, receptor 115
chr17	23603973	23605576	+	23603973;23605174	23604886;23605576	ES	0.5	50	50	ENSMUST00000164856.3	ENSMUSG00000090966.3	Vmn2r116	chr17	protein_coding	vomeronasal 2, receptor 116
chr17	23606388	23616611	+	23606388;23607960	23607733;23616611	ES	0.5	50	50	ENSMUST00000164856.3	ENSMUSG00000090966.3	Vmn2r116	chr17	protein_coding	vomeronasal 2, receptor 116
chr17	23603973	23604604	+	23603973	23604886	A3SS	0.25	50	50	ENSMUST00000164856.3	ENSMUSG00000090966.3	Vmn2r116	chr17	protein_coding	vomeronasal 2, receptor 116
chr17	23603973	23604996	+	23603973	23604886	A3SS	0.25	50	50	ENSMUST00000164856.3	ENSMUSG00000090966.3	Vmn2r116	chr17	protein_coding	vomeronasal 2, receptor 116
chr17	23606388	23607853	+	23606388	23607733	A3SS	0.33	50	50	ENSMUST00000164856.3	ENSMUSG00000090966.3	Vmn2r116	chr17	protein_coding	vomeronasal 2, receptor 116
chr17	23606388;23607960	23607853;23616611	+	23606388	23616611	cassetteExon	0.5	100	100	ENSMUST00000234010.2	ENSMUSG00000090966.3	Vmn2r116	chr17	protein_coding	vomeronasal 2, receptor 116
chr17	23603973	23605576	+	23605174	23605576	A5SS	0.5	50	50	ENSMUST00000234193.2	ENSMUSG00000090966.3	Vmn2r116	chr17	protein_coding	vomeronasal 2, receptor 116
chr17	23603973;23605174	23604996;23605576	+	23603973	23605576	cassetteExon	0.5	100	100	ENSMUST00000234055.2	ENSMUSG00000090966.3	Vmn2r116	chr17	protein_coding	vomeronasal 2, receptor 116
chr17	23603973	23604604	+	23603973	23605576	A3SS	0.25	50	50	ENSMUST00000234055.2	ENSMUSG00000090966.3	Vmn2r116	chr17	protein_coding	vomeronasal 2, receptor 116
chr17	23606388	23616611	+	23607960	23616611	A5SS	0.5	50	50	ENSMUST00000235122.2	ENSMUSG00000090966.3	Vmn2r116	chr17	protein_coding	vomeronasal 2, receptor 116
chr17	23603973	23604604	+	23603973	23604996	A3SS	0.25	50	50	ENSMUST00000234839.2	ENSMUSG00000090966.3	Vmn2r116	chr17	protein_coding	vomeronasal 2, receptor 116
chr17	23603973	23605576	+	23603973;23605174	23604604;23605576	ES	0.5	50	50	ENSMUST00000234872.2	ENSMUSG00000090966.3	Vmn2r116	chr17	protein_coding	vomeronasal 2, receptor 116
chr17	23697776	23698375	-	23697493	23698375	A3SS	0.33	50	50	ENSMUST00000171996.3	ENSMUSG00000091407.3	Vmn2r117	chr17	protein_coding	vomeronasal 2, receptor 117
chr17	23697894	23698375	-	23697493	23698375	A3SS	0.33	50	50	ENSMUST00000171996.3	ENSMUSG00000091407.3	Vmn2r117	chr17	protein_coding	vomeronasal 2, receptor 117
chr17	23697776	23698375	-	23697894	23698375	A3SS	0.33	50	50	ENSMUST00000234002.2	ENSMUSG00000091407.3	Vmn2r117	chr17	protein_coding	vomeronasal 2, receptor 117
chr17	23771084	23771905	-	23771084	23771536	A5SS&ES	0.5	50	50	ENSMUST00000182769.10	ENSMUSG00000067882.15	Casp16	chr17	polymorphic_pseudogene	caspase 16, apoptosis-related cysteine peptidase
chr17	23804548	23818126	-	23804548	23804935	5pMXE	0.5	50	50	ENSMUST00000115516.11	ENSMUSG00000062012.15	Zfp13	chr17	protein_coding	zinc finger protein 13
chr17	23800199	23804412	-	23800244	23804412	A3SS	0.33	50	50	ENSMUST00000115516.11	ENSMUSG00000062012.15	Zfp13	chr17	protein_coding	zinc finger protein 13
chr17	23803912	23804412	-	23800244	23804412	A3SS	0.33	50	50	ENSMUST00000115516.11	ENSMUSG00000062012.15	Zfp13	chr17	protein_coding	zinc finger protein 13
chr17	23799836	23800052	-	23799836	23800031	A5SS	0.5	50	50	ENSMUST00000115516.11	ENSMUSG00000062012.15	Zfp13	chr17	protein_coding	zinc finger protein 13
chr17	23803912	23804412	-	23800199	23804412	A3SS	0.33	50	50	ENSMUST00000227952.2	ENSMUSG00000062012.15	Zfp13	chr17	protein_coding	zinc finger protein 13
chr17	23824938	23826554	+	23824938;23826362	23826098;23826554	ES	0.33	50	50	ENSMUST00000095595.9	ENSMUSG00000023902.19	Zscan10	chr17	protein_coding	zinc finger and SCAN domain containing 10
chr17	23824803	23826098	+	23824938	23826098	A5SS	0.5	50	50	ENSMUST00000095595.9	ENSMUSG00000023902.19	Zscan10	chr17	protein_coding	zinc finger and SCAN domain containing 10
chr17	23824975	23826554	+	23826362	23826554	A5SS&ES	0.33	50	50	ENSMUST00000095595.9	ENSMUSG00000023902.19	Zscan10	chr17	protein_coding	zinc finger and SCAN domain containing 10
chr17	23824938	23828241	+	23824938;23827139	23827082;23828241	ES	0.5	50	50	ENSMUST00000115509.8	ENSMUSG00000023902.19	Zscan10	chr17	protein_coding	zinc finger and SCAN domain containing 10
chr17	23824938;23826618	23826554;23827082	+	23824938	23827082	cassetteExon	0.5	100	100	ENSMUST00000115509.8	ENSMUSG00000023902.19	Zscan10	chr17	protein_coding	zinc finger and SCAN domain containing 10
chr17	23824938	23826098	+	23824938	23827082	A3SS	0.25	50	50	ENSMUST00000115509.8	ENSMUSG00000023902.19	Zscan10	chr17	protein_coding	zinc finger and SCAN domain containing 10
chr17	23824938	23826554	+	23826362	23826554	A5SS&ES	0.33	50	50	ENSMUST00000148062.8	ENSMUSG00000023902.19	Zscan10	chr17	protein_coding	zinc finger and SCAN domain containing 10
chr17	23824938	23827082	+	23826618	23827082	A5SS&ES	0.5	50	50	ENSMUST00000148062.8	ENSMUSG00000023902.19	Zscan10	chr17	protein_coding	zinc finger and SCAN domain containing 10
chr17	23824938	23828241	+	23827139	23828241	A5SS&ES	0.5	50	50	ENSMUST00000148062.8	ENSMUSG00000023902.19	Zscan10	chr17	protein_coding	zinc finger and SCAN domain containing 10
chr17	23824938	23826554	+	23824975	23826554	A5SS	0.33	50	50	ENSMUST00000123866.8	ENSMUSG00000023902.19	Zscan10	chr17	protein_coding	zinc finger and SCAN domain containing 10
chr17	23824938	23826554	+	23824938	23826098	3pMXE	0.25	50	50	ENSMUST00000125912.2	ENSMUSG00000023902.19	Zscan10	chr17	protein_coding	zinc finger and SCAN domain containing 10
chr17	23824938	23828241	+	23824938	23826098	3pMXE	0.25	50	50	ENSMUST00000125912.2	ENSMUSG00000023902.19	Zscan10	chr17	protein_coding	zinc finger and SCAN domain containing 10
chr17	23824938	23826554	+	23824938	23828241	A3SS	0.25	50	50	ENSMUST00000117606.2	ENSMUSG00000023902.19	Zscan10	chr17	protein_coding	zinc finger and SCAN domain containing 10
chr17	23858910	23859113	-	23859016	23859113	A3SS	0.5	50	50	ENSMUST00000024696.9	ENSMUSG00000023903.9	Mmp25	chr17	protein_coding	matrix metallopeptidase 25
chr17	23850237	23850313	-	23850237	23850317	A5SS	0.5	50	50	ENSMUST00000024696.9	ENSMUSG00000023903.9	Mmp25	chr17	protein_coding	matrix metallopeptidase 25
chr17	23880418	23880742	+	23879526	23880742	A5SS	0.5	50	50	ENSMUST00000062967.10	ENSMUSG00000043782.10	Bicdl2	chr17	protein_coding	BICD family like cargo adaptor 2
chr17	23884104	23884362	+	23881036	23884362	A5SS	0.5	50	50	ENSMUST00000062967.10	ENSMUSG00000043782.10	Bicdl2	chr17	protein_coding	BICD family like cargo adaptor 2
chr17	23889881	23892493	-	23889881	23892488	A5SS	0.5	50	50	ENSMUST00000047436.11	ENSMUSG00000041319.15	Thoc6	chr17	protein_coding	THO complex 6
chr17	23892713	23892815	-	23892713	23892808	A5SS	0.5	50	50	ENSMUST00000095579.11	ENSMUSG00000041319.15	Thoc6	chr17	protein_coding	THO complex 6
chr17	23893042	23893521	+	23893042	23893509	A3SS	0.5	50	50	ENSMUST00000180140.8	ENSMUSG00000023904.11	Hcfc1r1	chr17	protein_coding	host cell factor C1 regulator 1 (XPO1-dependent)
chr17	23895247	23896301	-	23895247;23895597	23895493;23896301	ES	0.33	50	50	ENSMUST00000024698.10	ENSMUSG00000023905.16	Tnfrsf12a	chr17	protein_coding	tumor necrosis factor receptor superfamily, member 12a
chr17	23895597;23896171	23896095;23896301	-	23895597	23896301	cassetteExon	0.5	100	100	ENSMUST00000024698.10	ENSMUSG00000023905.16	Tnfrsf12a	chr17	protein_coding	tumor necrosis factor receptor superfamily, member 12a
chr17	23895156	23895493	-	23895247	23895493	A3SS	0.5	50	50	ENSMUST00000024698.10	ENSMUSG00000023905.16	Tnfrsf12a	chr17	protein_coding	tumor necrosis factor receptor superfamily, member 12a
chr17	23895247	23896301	-	23895597	23896301	A3SS&ES	0.33	50	50	ENSMUST00000233814.2	ENSMUSG00000023905.16	Tnfrsf12a	chr17	protein_coding	tumor necrosis factor receptor superfamily, member 12a
chr17	23896171	23896301	-	23895247	23896301	A3SS	0.33	50	50	ENSMUST00000167059.9	ENSMUSG00000023905.16	Tnfrsf12a	chr17	protein_coding	tumor necrosis factor receptor superfamily, member 12a
chr17	23898381	23900022	+	23898381;23898795	23898732;23900022	ES	0.5	50	50	ENSMUST00000024699.4	ENSMUSG00000023906.4	Cldn6	chr17	protein_coding	claudin 6
chr17	23898381	23900022	+	23898795	23900022	5pMXE	0.5	50	50	ENSMUST00000233364.2	ENSMUSG00000023906.4	Cldn6	chr17	protein_coding	claudin 6
chr17	23924209	23924503	-	23924209;23924406	23924353;23924503	ES	0.5	50	50	ENSMUST00000201734.4	ENSMUSG00000043747.13	1520401A03Rik	chr17	protein_coding	RIKEN cDNA 1520401A03 gene
chr17	23927516	23927974	-	23927516;23927759	23927724;23927974	ES	0.5	50	50	ENSMUST00000201734.4	ENSMUSG00000043747.13	1520401A03Rik	chr17	protein_coding	RIKEN cDNA 1520401A03 gene
chr17	23939083	23940805	-	23939083	23939493	5pMXE	0.5	50	50	ENSMUST00000201734.4	ENSMUSG00000043747.13	1520401A03Rik	chr17	protein_coding	RIKEN cDNA 1520401A03 gene
chr17	23924844	23924972	-	23924844	23924921	A5SS	0.5	50	50	ENSMUST00000201734.4	ENSMUSG00000043747.13	1520401A03Rik	chr17	protein_coding	RIKEN cDNA 1520401A03 gene
chr17	23927203	23927481	-	23927204	23927481	A3SS	0.5	50	50	ENSMUST00000178006.8	ENSMUSG00000043747.13	1520401A03Rik	chr17	protein_coding	RIKEN cDNA 1520401A03 gene
chr17	23932420;23932678	23932499;23933536	-	23932420	23933536	cassetteExon	0.5	100	100	ENSMUST00000176095.4	ENSMUSG00000043747.13	1520401A03Rik	chr17	protein_coding	RIKEN cDNA 1520401A03 gene
chr17	23954694	23955469	+	23954694;23955375	23955298;23955469	ES	0.5	50	50	ENSMUST00000024701.9	ENSMUSG00000023908.9	Pkmyt1	chr17	protein_coding	protein kinase, membrane associated tyrosine/threonine 1
chr17	23953290	23953657	+	23953290	23953940	A3SS	0.5	50	50	ENSMUST00000024701.9	ENSMUSG00000023908.9	Pkmyt1	chr17	protein_coding	protein kinase, membrane associated tyrosine/threonine 1
chr17	23957335	23959773	-	23957335	23958834	5pMXE	0.5	50	50	ENSMUST00000024702.5	ENSMUSG00000023909.5	Paqr4	chr17	protein_coding	progestin and adipoQ receptor family member IV
chr17	23968501	23968574	+	23965380	23968574	A5SS	0.5	50	50	ENSMUST00000181291.8	ENSMUSG00000097006.8	9530082P21Rik	chr17	lncRNA	RIKEN cDNA 9530082P21 gene
chr17	23982292;23989306	23989209;23990389	-	23982292	23990389	cassetteExon	0.5	100	100	ENSMUST00000086325.13	ENSMUSG00000040097.17	Flywch1	chr17	protein_coding	FLYWCH-type zinc finger 1
chr17	23996073;23996914	23996786;23998602	-	23996073	23998602	cassetteExon	0.5	100	100	ENSMUST00000024704.10	ENSMUSG00000023911.13	Flywch2	chr17	protein_coding	FLYWCH family member 2
chr17	23996073;23997087	23996786;23998602	-	23996073	23998602	cassetteExon	0.5	100	100	ENSMUST00000024704.10	ENSMUSG00000023911.13	Flywch2	chr17	protein_coding	FLYWCH family member 2
chr17	23997087	23998602	-	23996914	23998602	A3SS	0.33	50	50	ENSMUST00000122991.2	ENSMUSG00000023911.13	Flywch2	chr17	protein_coding	FLYWCH family member 2
chr17	24022281	24025906	+	24011485	24025906	A5SS	0.33	50	50	ENSMUST00000186961.7	ENSMUSG00000039218.18	Srrm2	chr17	protein_coding	serine/arginine repetitive matrix 2
chr17	24022372	24025906	+	24011485	24025906	A5SS	0.33	50	50	ENSMUST00000186961.7	ENSMUSG00000039218.18	Srrm2	chr17	protein_coding	serine/arginine repetitive matrix 2
chr17	24022372	24027040	+	24026176	24027040	A5SS&ES	0.5	50	50	ENSMUST00000186961.7	ENSMUSG00000039218.18	Srrm2	chr17	protein_coding	serine/arginine repetitive matrix 2
chr17	24022372	24027040	+	24022372;24026176	24025906;24027040	ES	0.5	50	50	ENSMUST00000190686.7	ENSMUSG00000039218.18	Srrm2	chr17	protein_coding	serine/arginine repetitive matrix 2
chr17	24030705;24031051	24030791;24031402	+	24030705	24031402	cassetteExon	0.5	100	100	ENSMUST00000190686.7	ENSMUSG00000039218.18	Srrm2	chr17	protein_coding	serine/arginine repetitive matrix 2
chr17	24040664;24040989	24040895;24041387	+	24040664	24041387	cassetteExon	0.5	100	100	ENSMUST00000190686.7	ENSMUSG00000039218.18	Srrm2	chr17	protein_coding	serine/arginine repetitive matrix 2
chr17	24022281	24025906	+	24022372	24025906	A5SS	0.33	50	50	ENSMUST00000190686.7	ENSMUSG00000039218.18	Srrm2	chr17	protein_coding	serine/arginine repetitive matrix 2
chr17	24040664	24041387	+	24040664	24040895	A3SS	0.5	50	50	ENSMUST00000186914.2	ENSMUSG00000039218.18	Srrm2	chr17	protein_coding	serine/arginine repetitive matrix 2
chr17	24043953;24045640	24045560;24046442	-	24043953	24046442	cassetteExon	0.5	100	100	ENSMUST00000069579.7	ENSMUSG00000055839.7	Elob	chr17	protein_coding	elongin B
chr17	24047922	24048057	-	24047952	24048057	A3SS	0.5	50	50	ENSMUST00000069579.7	ENSMUSG00000055839.7	Elob	chr17	protein_coding	elongin B
chr17	24046547	24047556	-	24046547	24047818	A5SS	0.25	50	50	ENSMUST00000069579.7	ENSMUSG00000055839.7	Elob	chr17	protein_coding	elongin B
chr17	24046547	24047618	-	24046547	24047818	A5SS	0.25	50	50	ENSMUST00000069579.7	ENSMUSG00000055839.7	Elob	chr17	protein_coding	elongin B
chr17	24046547	24047721	-	24046547	24047818	A5SS	0.25	50	50	ENSMUST00000069579.7	ENSMUSG00000055839.7	Elob	chr17	protein_coding	elongin B
chr17	24046547	24047556	-	24046547	24047618	A5SS	0.25	50	50	ENSMUST00000233483.2	ENSMUSG00000055839.7	Elob	chr17	protein_coding	elongin B
chr17	24046547	24047721	-	24046547	24047618	A5SS	0.25	50	50	ENSMUST00000233483.2	ENSMUSG00000055839.7	Elob	chr17	protein_coding	elongin B
chr17	24046547	24047721	-	24046547	24047556	A5SS	0.25	50	50	ENSMUST00000233796.2	ENSMUSG00000055839.7	Elob	chr17	protein_coding	elongin B
chr17	24054571	24054651	-	24054273	24054651	A3SS	0.5	50	50	ENSMUST00000059906.8	ENSMUSG00000049620.10	Prss33	chr17	protein_coding	protease, serine 33
chr17	24062957	24063051	-	24062957	24063074	A5SS	0.5	50	50	ENSMUST00000122936.8	ENSMUSG00000024114.16	Prss41	chr17	protein_coding	protease, serine 41
chr17	24072900	24073353	+	24062972	24073353	A5SS	0.5	50	50	ENSMUST00000144925.2	ENSMUSG00000048992.10	Prss32	chr17	protein_coding	protease, serine 32
chr17	24075225	24076239	+	24075225	24076213	A3SS	0.5	50	50	ENSMUST00000061725.8	ENSMUSG00000048992.10	Prss32	chr17	protein_coding	protease, serine 32
chr17	24073426	24074945	+	24073515	24074945	A5SS	0.5	50	50	ENSMUST00000061725.8	ENSMUSG00000048992.10	Prss32	chr17	protein_coding	protease, serine 32
chr17	24099883	24099973	+	24099883	24117814	A3SS	0.5	50	50	ENSMUST00000168272.9	ENSMUSG00000096278.9	Dcpp2	chr17	protein_coding	demilune cell and parotid protein 2
chr17	24117724	24117814	+	24099883	24117814	A5SS	0.5	50	50	ENSMUST00000168272.9	ENSMUSG00000096278.9	Dcpp2	chr17	protein_coding	demilune cell and parotid protein 2
chr17	24160980	24161354	+	24160741	24161354	A5SS	0.33	50	50	ENSMUST00000181985.8	ENSMUSG00000024128.14	Sbp	chr17	protein_coding	spermine binding protein
chr17	24161112	24161354	+	24160741	24161354	A5SS	0.33	50	50	ENSMUST00000181985.8	ENSMUSG00000024128.14	Sbp	chr17	protein_coding	spermine binding protein
chr17	24161112	24161354	+	24160980	24161354	A5SS	0.33	50	50	ENSMUST00000183252.8	ENSMUSG00000024128.14	Sbp	chr17	protein_coding	spermine binding protein
chr17	24192172;24192454	24192388;24192551	-	24192172	24192551	cassetteExon	0.5	100	100	ENSMUST00000024936.11	ENSMUSG00000024124.11	Prss30	chr17	protein_coding	protease, serine 30
chr17	24192745	24193194	-	24193080	24193194	A3SS&ES	0.5	50	50	ENSMUST00000024936.11	ENSMUSG00000024124.11	Prss30	chr17	protein_coding	protease, serine 30
chr17	24193220	24193450	-	24193220	24194103	A5SS	0.5	50	50	ENSMUST00000024936.11	ENSMUSG00000024124.11	Prss30	chr17	protein_coding	protease, serine 30
chr17	24279325	24286954	-	24279325	24292151	A5SS	0.5	50	50	ENSMUST00000017090.6	ENSMUSG00000016946.7	Kctd5	chr17	protein_coding	potassium channel tetramerisation domain containing 5
chr17	24330091	24369821	-	24330091	24360411	5pMXE	0.2	50	50	ENSMUST00000102927.10	ENSMUSG00000024122.17	Pdpk1	chr17	protein_coding	3-phosphoinositide dependent protein kinase 1
chr17	24292724	24298466	-	24298116	24298466	A3SS	0.5	50	50	ENSMUST00000102927.10	ENSMUSG00000024122.17	Pdpk1	chr17	protein_coding	3-phosphoinositide dependent protein kinase 1
chr17	24330091	24339508	-	24330091	24360411	A5SS	0.2	50	50	ENSMUST00000102927.10	ENSMUSG00000024122.17	Pdpk1	chr17	protein_coding	3-phosphoinositide dependent protein kinase 1
chr17	24330091	24359720	-	24330091	24360411	A5SS	0.2	50	50	ENSMUST00000102927.10	ENSMUSG00000024122.17	Pdpk1	chr17	protein_coding	3-phosphoinositide dependent protein kinase 1
chr17	24330091	24360001	-	24330091	24360411	A5SS	0.2	50	50	ENSMUST00000102927.10	ENSMUSG00000024122.17	Pdpk1	chr17	protein_coding	3-phosphoinositide dependent protein kinase 1
chr17	24298116	24306978	-	24299409	24306978	A3SS&ES	0.5	50	50	ENSMUST00000115411.8	ENSMUSG00000024122.17	Pdpk1	chr17	protein_coding	3-phosphoinositide dependent protein kinase 1
chr17	24317143;24319882	24319785;24329822	-	24317143;24326245	24326203;24329822	MXE	0.5	100	100	ENSMUST00000115409.9	ENSMUSG00000024122.17	Pdpk1	chr17	protein_coding	3-phosphoinositide dependent protein kinase 1
chr17	24325938	24326203	-	24317143	24326203	A3SS	0.5	50	50	ENSMUST00000115409.9	ENSMUSG00000024122.17	Pdpk1	chr17	protein_coding	3-phosphoinositide dependent protein kinase 1
chr17	24298116	24298466	-	24298116	24306978	A5SS	0.5	50	50	ENSMUST00000115407.9	ENSMUSG00000024122.17	Pdpk1	chr17	protein_coding	3-phosphoinositide dependent protein kinase 1
chr17	24330091	24339508	-	24330091	24369821	A5SS	0.2	50	50	ENSMUST00000052462.13	ENSMUSG00000024122.17	Pdpk1	chr17	protein_coding	3-phosphoinositide dependent protein kinase 1
chr17	24330091	24359720	-	24330091	24369821	A5SS	0.2	50	50	ENSMUST00000052462.13	ENSMUSG00000024122.17	Pdpk1	chr17	protein_coding	3-phosphoinositide dependent protein kinase 1
chr17	24330091	24360001	-	24330091	24369821	A5SS	0.2	50	50	ENSMUST00000052462.13	ENSMUSG00000024122.17	Pdpk1	chr17	protein_coding	3-phosphoinositide dependent protein kinase 1
chr17	24319882	24320576	-	24319882	24329822	A5SS	0.5	50	50	ENSMUST00000140906.8	ENSMUSG00000024122.17	Pdpk1	chr17	protein_coding	3-phosphoinositide dependent protein kinase 1
chr17	24319882	24329822	-	24326245	24329822	3pMXE	0.5	50	50	ENSMUST00000150578.2	ENSMUSG00000024122.17	Pdpk1	chr17	protein_coding	3-phosphoinositide dependent protein kinase 1
chr17	24330091	24360001	-	24330091	24359720	5pMXE	0.2	50	50	ENSMUST00000144533.8	ENSMUSG00000024122.17	Pdpk1	chr17	protein_coding	3-phosphoinositide dependent protein kinase 1
chr17	24330091	24339508	-	24330091	24359720	A5SS	0.2	50	50	ENSMUST00000144533.8	ENSMUSG00000024122.17	Pdpk1	chr17	protein_coding	3-phosphoinositide dependent protein kinase 1
chr17	24330091	24360001	-	24330091	24339508	5pMXE	0.2	50	50	ENSMUST00000154982.2	ENSMUSG00000024122.17	Pdpk1	chr17	protein_coding	3-phosphoinositide dependent protein kinase 1
chr17	24375186	24375545	-	24375059	24375545	A3SS	0.5	50	50	ENSMUST00000132944.8	ENSMUSG00000036820.13	Amdhd2	chr17	protein_coding	amidohydrolase domain containing 2
chr17	24377668	24381950	-	24377668;24380687	24380556;24381950	ES	0.5	50	50	ENSMUST00000129523.3	ENSMUSG00000036820.13	Amdhd2	chr17	protein_coding	amidohydrolase domain containing 2
chr17	24383856	24388577	-	24383856	24388180	5pMXE	0.33	50	50	ENSMUST00000024932.12	ENSMUSG00000024121.14	Atp6v0c	chr17	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit C
chr17	24383856	24387689	-	24383856	24388180	A5SS	0.33	50	50	ENSMUST00000024932.12	ENSMUSG00000024121.14	Atp6v0c	chr17	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit C
chr17	24383856	24388577	-	24383856;24388260	24388180;24388577	ES	0.5	50	50	ENSMUST00000098862.9	ENSMUSG00000024121.14	Atp6v0c	chr17	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit C
chr17	24388260	24388468	-	24388260	24388577	A5SS	0.5	50	50	ENSMUST00000098862.9	ENSMUSG00000024121.14	Atp6v0c	chr17	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit C
chr17	24383856	24388577	-	24383856	24387689	5pMXE	0.33	50	50	ENSMUST00000156061.2	ENSMUSG00000024121.14	Atp6v0c	chr17	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit C
chr17	24402826	24408918	-	24402826;24405175	24404178;24408918	ES	0.33	50	50	ENSMUST00000168410.9	ENSMUSG00000036473.17	Tbc1d24	chr17	protein_coding	TBC1 domain family, member 24
chr17	24402826;24403372	24403355;24404178	-	24402826	24404178	cassetteExon	0.5	100	100	ENSMUST00000168410.9	ENSMUSG00000036473.17	Tbc1d24	chr17	protein_coding	TBC1 domain family, member 24
chr17	24402822	24404178	-	24402826	24404178	A3SS	0.33	50	50	ENSMUST00000168410.9	ENSMUSG00000036473.17	Tbc1d24	chr17	protein_coding	TBC1 domain family, member 24
chr17	24405261	24408918	-	24405175	24408918	A3SS	0.33	50	50	ENSMUST00000168410.9	ENSMUSG00000036473.17	Tbc1d24	chr17	protein_coding	TBC1 domain family, member 24
chr17	24405261	24424448	-	24409027	24424448	A3SS&ES	0.5	50	50	ENSMUST00000168410.9	ENSMUSG00000036473.17	Tbc1d24	chr17	protein_coding	TBC1 domain family, member 24
chr17	24409027	24417329	-	24409027	24424448	A5SS	0.25	50	50	ENSMUST00000168410.9	ENSMUSG00000036473.17	Tbc1d24	chr17	protein_coding	TBC1 domain family, member 24
chr17	24409027	24418865	-	24409027	24424448	A5SS	0.25	50	50	ENSMUST00000168410.9	ENSMUSG00000036473.17	Tbc1d24	chr17	protein_coding	TBC1 domain family, member 24
chr17	24409027	24424468	-	24409027	24424448	A5SS	0.25	50	50	ENSMUST00000168410.9	ENSMUSG00000036473.17	Tbc1d24	chr17	protein_coding	TBC1 domain family, member 24
chr17	24405261	24424448	-	24405261;24409027	24408918;24424448	ES	0.5	50	50	ENSMUST00000097376.10	ENSMUSG00000036473.17	Tbc1d24	chr17	protein_coding	TBC1 domain family, member 24
chr17	24402822	24404178	-	24403372	24404178	A3SS&ES	0.33	50	50	ENSMUST00000097376.10	ENSMUSG00000036473.17	Tbc1d24	chr17	protein_coding	TBC1 domain family, member 24
chr17	24399650	24400105	-	24399650	24400199	A5SS	0.5	50	50	ENSMUST00000097376.10	ENSMUSG00000036473.17	Tbc1d24	chr17	protein_coding	TBC1 domain family, member 24
chr17	24402826	24408918	-	24402826;24405261	24404178;24408918	ES	0.33	50	50	ENSMUST00000040474.11	ENSMUSG00000036473.17	Tbc1d24	chr17	protein_coding	TBC1 domain family, member 24
chr17	24409027	24418865	-	24409027;24417500	24417329;24418865	ES	0.5	50	50	ENSMUST00000171189.8	ENSMUSG00000036473.17	Tbc1d24	chr17	protein_coding	TBC1 domain family, member 24
chr17	24402826;24409027	24408918;24424448	-	24402826;24405261	24404178;24424448	MXE	0.5	100	100	ENSMUST00000202925.4	ENSMUSG00000036473.17	Tbc1d24	chr17	protein_coding	TBC1 domain family, member 24
chr17	24402826;24409027	24408918;24424448	-	24402826;24405261	24403355;24424448	MXE	0.5	100	100	ENSMUST00000201301.4	ENSMUSG00000036473.17	Tbc1d24	chr17	protein_coding	TBC1 domain family, member 24
chr17	24405261	24424448	-	24405261	24408918	A5SS&ES	0.5	50	50	ENSMUST00000201960.4	ENSMUSG00000036473.17	Tbc1d24	chr17	protein_coding	TBC1 domain family, member 24
chr17	24409027	24417329	-	24409027	24424468	A5SS	0.25	50	50	ENSMUST00000201960.4	ENSMUSG00000036473.17	Tbc1d24	chr17	protein_coding	TBC1 domain family, member 24
chr17	24409027	24418865	-	24409027	24424468	A5SS	0.25	50	50	ENSMUST00000201960.4	ENSMUSG00000036473.17	Tbc1d24	chr17	protein_coding	TBC1 domain family, member 24
chr17	24402826	24408918	-	24405175	24408918	A3SS&ES	0.33	50	50	ENSMUST00000201359.4	ENSMUSG00000036473.17	Tbc1d24	chr17	protein_coding	TBC1 domain family, member 24
chr17	24405261	24408918	-	24402826	24408918	A3SS	0.33	50	50	ENSMUST00000201583.2	ENSMUSG00000036473.17	Tbc1d24	chr17	protein_coding	TBC1 domain family, member 24
chr17	24402826	24403355	-	24402826	24408918	A5SS	0.33	50	50	ENSMUST00000201583.2	ENSMUSG00000036473.17	Tbc1d24	chr17	protein_coding	TBC1 domain family, member 24
chr17	24402826	24404178	-	24402826	24408918	A5SS	0.33	50	50	ENSMUST00000201583.2	ENSMUSG00000036473.17	Tbc1d24	chr17	protein_coding	TBC1 domain family, member 24
chr17	24426961	24427319	-	24426961	24427033	A5SS	0.33	50	50	ENSMUST00000024931.6	ENSMUSG00000117406.2	Ntn3	chr17	protein_coding	netrin 3
chr17	24426961	24428258	-	24426961	24427033	A5SS	0.33	50	50	ENSMUST00000024931.6	ENSMUSG00000117406.2	Ntn3	chr17	protein_coding	netrin 3
chr17	24426961	24428258	-	24426961	24427319	A5SS	0.33	50	50	ENSMUST00000234420.2	ENSMUSG00000117406.2	Ntn3	chr17	protein_coding	netrin 3
chr17	24431583	24439423	+	24427973	24439423	A5SS	0.5	50	50	ENSMUST00000148704.8	ENSMUSG00000085185.11	BC028777	chr17	lncRNA	cDNA sequence BC028777
chr17	24439598	24440010	+	24439599	24440010	A5SS	0.5	50	50	ENSMUST00000148704.8	ENSMUSG00000085185.11	BC028777	chr17	lncRNA	cDNA sequence BC028777
chr17	24439284	24439496	-	24439284	24439491	A5SS	0.5	50	50	ENSMUST00000024930.8	ENSMUSG00000024118.15	Tedc2	chr17	protein_coding	tubulin epsilon and delta complex 2
chr17	24453508;24454623	24454510;24456055	-	24453508	24456055	cassetteExon	0.5	100	100	ENSMUST00000115390.5	ENSMUSG00000072082.8	Ccnf	chr17	protein_coding	cyclin F
chr17	24468379	24470155	-	24468379	24470269	A5SS	0.5	50	50	ENSMUST00000115390.5	ENSMUSG00000072082.8	Ccnf	chr17	protein_coding	cyclin F
chr17	24545447	24547503	-	24545447;24546729	24546613;24547503	ES	0.5	50	50	ENSMUST00000121226.8	ENSMUSG00000035435.18	Abca17	chr17	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 17
chr17	24571225;24576965	24576893;24579862	+	24571225	24579862	cassetteExon	0.5	100	100	ENSMUST00000133816.8	ENSMUSG00000024130.17	Abca3	chr17	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 3
chr17	24576965	24579843	+	24576965	24579862	A3SS	0.5	50	50	ENSMUST00000039013.15	ENSMUSG00000024130.17	Abca3	chr17	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 3
chr17	24571225	24579862	+	24571225	24576893	A3SS&ES	0.5	50	50	ENSMUST00000155889.2	ENSMUSG00000024130.17	Abca3	chr17	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 3
chr17	24611960	24615424	+	24611960	24618859	A3SS	0.5	50	50	ENSMUST00000117337.2	ENSMUSG00000024130.17	Abca3	chr17	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 3
chr17	24617582	24618859	+	24611960	24618859	A5SS	0.5	50	50	ENSMUST00000117337.2	ENSMUSG00000024130.17	Abca3	chr17	protein_coding	ATP-binding cassette, sub-family A (ABC1), member 3
chr17	24631548	24633286	-	24631548;24632902	24632479;24633286	ES	0.33	50	50	ENSMUST00000181014.8	ENSMUSG00000073437.11	D330041H03Rik	chr17	lncRNA	RIKEN cDNA D330041H03 gene
chr17	24631571	24632479	-	24631548	24632479	A3SS	0.5	50	50	ENSMUST00000181014.8	ENSMUSG00000073437.11	D330041H03Rik	chr17	lncRNA	RIKEN cDNA D330041H03 gene
chr17	24631571	24633286	-	24632902	24633286	A3SS&ES	0.33	50	50	ENSMUST00000181014.8	ENSMUSG00000073437.11	D330041H03Rik	chr17	lncRNA	RIKEN cDNA D330041H03 gene
chr17	24631548	24632675	-	24631548	24632479	A5SS	0.33	50	50	ENSMUST00000181014.8	ENSMUSG00000073437.11	D330041H03Rik	chr17	lncRNA	RIKEN cDNA D330041H03 gene
chr17	24631548;24632902	24632675;24633286	-	24631548	24633286	cassetteExon	0.5	100	100	ENSMUST00000181259.8	ENSMUSG00000073437.11	D330041H03Rik	chr17	lncRNA	RIKEN cDNA D330041H03 gene
chr17	24631571	24633286	-	24631548	24633286	A3SS	0.33	50	50	ENSMUST00000181259.8	ENSMUSG00000073437.11	D330041H03Rik	chr17	lncRNA	RIKEN cDNA D330041H03 gene
chr17	24631548	24633286	-	24631548	24632479	5pMXE	0.33	50	50	ENSMUST00000084725.6	ENSMUSG00000073437.11	D330041H03Rik	chr17	lncRNA	RIKEN cDNA D330041H03 gene
chr17	24631571;24632902	24632479;24633286	-	24631571	24633286	cassetteExon	0.5	100	100	ENSMUST00000180390.2	ENSMUSG00000073437.11	D330041H03Rik	chr17	lncRNA	RIKEN cDNA D330041H03 gene
chr17	24631548	24633286	-	24632902	24633286	A3SS&ES	0.33	50	50	ENSMUST00000180579.2	ENSMUSG00000073437.11	D330041H03Rik	chr17	lncRNA	RIKEN cDNA D330041H03 gene
chr17	24633708;24634136	24634015;24637431	+	24633708	24637431	cassetteExon	0.5	100	100	ENSMUST00000115371.9	ENSMUSG00000034681.18	Rnps1	chr17	protein_coding	RNA binding protein with serine rich domain 1
chr17	24633708;24637192	24637012;24637431	+	24633708	24637431	cassetteExon	0.5	100	100	ENSMUST00000115371.9	ENSMUSG00000034681.18	Rnps1	chr17	protein_coding	RNA binding protein with serine rich domain 1
chr17	24633708;24637202	24637012;24637431	+	24633708	24637431	cassetteExon	0.5	100	100	ENSMUST00000115371.9	ENSMUSG00000034681.18	Rnps1	chr17	protein_coding	RNA binding protein with serine rich domain 1
chr17	24633708;24637192	24637012;24637431	+	24633708;24634136	24634015;24637431	MXE	0.5	100	100	ENSMUST00000234977.2	ENSMUSG00000034681.18	Rnps1	chr17	protein_coding	RNA binding protein with serine rich domain 1
chr17	24633708;24637202	24637012;24637431	+	24633708;24634136	24634015;24637431	MXE	0.5	100	100	ENSMUST00000234977.2	ENSMUSG00000034681.18	Rnps1	chr17	protein_coding	RNA binding protein with serine rich domain 1
chr17	24634136;24637192	24637012;24637431	+	24634136	24637431	cassetteExon	0.5	100	100	ENSMUST00000234977.2	ENSMUSG00000034681.18	Rnps1	chr17	protein_coding	RNA binding protein with serine rich domain 1
chr17	24634136;24637202	24637012;24637431	+	24634136	24637431	cassetteExon	0.5	100	100	ENSMUST00000234977.2	ENSMUSG00000034681.18	Rnps1	chr17	protein_coding	RNA binding protein with serine rich domain 1
chr17	24633708;24634136	24634015;24637012	+	24633708	24637012	cassetteExon	0.5	100	100	ENSMUST00000088512.13	ENSMUSG00000034681.18	Rnps1	chr17	protein_coding	RNA binding protein with serine rich domain 1
chr17	24637202	24637431	+	24637192	24637431	A5SS	0.25	50	50	ENSMUST00000088512.13	ENSMUSG00000034681.18	Rnps1	chr17	protein_coding	RNA binding protein with serine rich domain 1
chr17	24633708	24637012	+	24633708	24634015	3pMXE	0.33	50	50	ENSMUST00000234729.2	ENSMUSG00000034681.18	Rnps1	chr17	protein_coding	RNA binding protein with serine rich domain 1
chr17	24633708	24637431	+	24633708	24634015	3pMXE	0.33	50	50	ENSMUST00000234729.2	ENSMUSG00000034681.18	Rnps1	chr17	protein_coding	RNA binding protein with serine rich domain 1
chr17	24633708	24637431	+	24637202	24637431	5pMXE	0.25	50	50	ENSMUST00000234089.2	ENSMUSG00000034681.18	Rnps1	chr17	protein_coding	RNA binding protein with serine rich domain 1
chr17	24634136	24637431	+	24637202	24637431	5pMXE	0.25	50	50	ENSMUST00000234089.2	ENSMUSG00000034681.18	Rnps1	chr17	protein_coding	RNA binding protein with serine rich domain 1
chr17	24645913	24652116	+	24645913	24652107	A3SS	0.5	50	50	ENSMUST00000234304.2	ENSMUSG00000024132.7	Eci1	chr17	protein_coding	enoyl-Coenzyme A delta isomerase 1
chr17	24646096	24652107	+	24645913	24652107	A5SS	0.5	50	50	ENSMUST00000234304.2	ENSMUSG00000024132.7	Eci1	chr17	protein_coding	enoyl-Coenzyme A delta isomerase 1
chr17	24660721	24661026	-	24660721;24660944	24660832;24661026	ES	0.5	50	50	ENSMUST00000153858.8	ENSMUSG00000024136.15	Dnase1l2	chr17	protein_coding	deoxyribonuclease 1-like 2
chr17	24661290	24661432	-	24661290	24661379	A5SS	0.5	50	50	ENSMUST00000088506.12	ENSMUSG00000024136.15	Dnase1l2	chr17	protein_coding	deoxyribonuclease 1-like 2
chr17	24670531	24689064	-	24670531	24674109	5pMXE	0.5	50	50	ENSMUST00000227293.2	ENSMUSG00000024137.10	E4f1	chr17	protein_coding	E4F transcription factor 1
chr17	24664287	24664420	-	24664313	24664420	A3SS	0.5	50	50	ENSMUST00000227293.2	ENSMUSG00000024137.10	E4f1	chr17	protein_coding	E4F transcription factor 1
chr17	24664525	24664920	-	24664528	24664920	A3SS	0.5	50	50	ENSMUST00000227293.2	ENSMUSG00000024137.10	E4f1	chr17	protein_coding	E4F transcription factor 1
chr17	24665815	24666064	-	24665908	24666064	A3SS	0.5	50	50	ENSMUST00000056032.9	ENSMUSG00000024137.10	E4f1	chr17	protein_coding	E4F transcription factor 1
chr17	24685706	24689064	-	24670531	24689064	A3SS	0.5	50	50	ENSMUST00000226654.2	ENSMUSG00000024137.10	E4f1	chr17	protein_coding	E4F transcription factor 1
chr17	24697432	24697986	-	24697338	24697986	A3SS	0.2	50	50	ENSMUST00000234941.2	ENSMUSG00000024142.16	Mlst8	chr17	protein_coding	MTOR associated protein, LST8 homolog (S. cerevisiae)
chr17	24697452	24697986	-	24697338	24697986	A3SS	0.2	50	50	ENSMUST00000234941.2	ENSMUSG00000024142.16	Mlst8	chr17	protein_coding	MTOR associated protein, LST8 homolog (S. cerevisiae)
chr17	24697457	24697986	-	24697338	24697986	A3SS	0.2	50	50	ENSMUST00000234941.2	ENSMUSG00000024142.16	Mlst8	chr17	protein_coding	MTOR associated protein, LST8 homolog (S. cerevisiae)
chr17	24697136	24697252	-	24697136	24697294	A5SS	0.5	50	50	ENSMUST00000234941.2	ENSMUSG00000024142.16	Mlst8	chr17	protein_coding	MTOR associated protein, LST8 homolog (S. cerevisiae)
chr17	24697452	24697986	-	24697432	24697986	A3SS	0.2	50	50	ENSMUST00000179163.3	ENSMUSG00000024142.16	Mlst8	chr17	protein_coding	MTOR associated protein, LST8 homolog (S. cerevisiae)
chr17	24697457	24697986	-	24697432	24697986	A3SS	0.2	50	50	ENSMUST00000179163.3	ENSMUSG00000024142.16	Mlst8	chr17	protein_coding	MTOR associated protein, LST8 homolog (S. cerevisiae)
chr17	24697457	24697986	-	24697452	24697986	A3SS	0.2	50	50	ENSMUST00000070888.14	ENSMUSG00000024142.16	Mlst8	chr17	protein_coding	MTOR associated protein, LST8 homolog (S. cerevisiae)
chr17	24696999	24697986	-	24696999	24697085	A5SS&ES	0.5	50	50	ENSMUST00000234686.2	ENSMUSG00000024142.16	Mlst8	chr17	protein_coding	MTOR associated protein, LST8 homolog (S. cerevisiae)
chr17	24696999;24697338	24697085;24697986	-	24696999	24697986	cassetteExon	0.5	100	100	ENSMUST00000234543.2	ENSMUSG00000024142.16	Mlst8	chr17	protein_coding	MTOR associated protein, LST8 homolog (S. cerevisiae)
chr17	24696999;24697432	24697085;24697986	-	24696999	24697986	cassetteExon	0.5	100	100	ENSMUST00000234543.2	ENSMUSG00000024142.16	Mlst8	chr17	protein_coding	MTOR associated protein, LST8 homolog (S. cerevisiae)
chr17	24696999;24697452	24697085;24697986	-	24696999	24697986	cassetteExon	0.5	100	100	ENSMUST00000234543.2	ENSMUSG00000024142.16	Mlst8	chr17	protein_coding	MTOR associated protein, LST8 homolog (S. cerevisiae)
chr17	24696999;24697457	24697085;24697986	-	24696999	24697986	cassetteExon	0.5	100	100	ENSMUST00000234543.2	ENSMUSG00000024142.16	Mlst8	chr17	protein_coding	MTOR associated protein, LST8 homolog (S. cerevisiae)
chr17	24720307;24721392	24721090;24722775	+	24720307	24722775	cassetteExon	0.5	100	100	ENSMUST00000234717.2	ENSMUSG00000033597.10	Caskin1	chr17	protein_coding	CASK interacting protein 1
chr17	24732058	24732873	-	24732058;24732350	24732167;24732873	ES	0.5	50	50	ENSMUST00000176652.8	ENSMUSG00000052752.16	Traf7	chr17	protein_coding	TNF receptor-associated factor 7
chr17	24733191	24735479	-	24733191;24733803	24733687;24735479	ES	0.33	50	50	ENSMUST00000176652.8	ENSMUSG00000052752.16	Traf7	chr17	protein_coding	TNF receptor-associated factor 7
chr17	24733803	24737716	-	24733803;24735570	24735479;24737716	ES	0.25	50	50	ENSMUST00000176652.8	ENSMUSG00000052752.16	Traf7	chr17	protein_coding	TNF receptor-associated factor 7
chr17	24732087	24732167	-	24732058	24732167	A3SS	0.5	50	50	ENSMUST00000176652.8	ENSMUSG00000052752.16	Traf7	chr17	protein_coding	TNF receptor-associated factor 7
chr17	24733840	24735479	-	24733803	24735479	A3SS	0.33	50	50	ENSMUST00000176652.8	ENSMUSG00000052752.16	Traf7	chr17	protein_coding	TNF receptor-associated factor 7
chr17	24735573	24737716	-	24735570	24737716	A3SS	0.25	50	50	ENSMUST00000176652.8	ENSMUSG00000052752.16	Traf7	chr17	protein_coding	TNF receptor-associated factor 7
chr17	24737467	24737716	-	24735570	24737716	A3SS	0.25	50	50	ENSMUST00000176652.8	ENSMUSG00000052752.16	Traf7	chr17	protein_coding	TNF receptor-associated factor 7
chr17	24737768	24738105	-	24737773	24738105	A3SS	0.5	50	50	ENSMUST00000176652.8	ENSMUSG00000052752.16	Traf7	chr17	protein_coding	TNF receptor-associated factor 7
chr17	24731360	24731930	-	24731360	24731924	A5SS	0.5	50	50	ENSMUST00000176652.8	ENSMUSG00000052752.16	Traf7	chr17	protein_coding	TNF receptor-associated factor 7
chr17	24737773	24738088	-	24737773	24738105	A5SS	0.5	50	50	ENSMUST00000176652.8	ENSMUSG00000052752.16	Traf7	chr17	protein_coding	TNF receptor-associated factor 7
chr17	24738220	24746429	-	24738220	24746740	A5SS	0.5	50	50	ENSMUST00000176652.8	ENSMUSG00000052752.16	Traf7	chr17	protein_coding	TNF receptor-associated factor 7
chr17	24733191;24733803	24733687;24737716	-	24733191;24735573	24735479;24737716	MXE	0.5	100	100	ENSMUST00000070777.13	ENSMUSG00000052752.16	Traf7	chr17	protein_coding	TNF receptor-associated factor 7
chr17	24733191;24733840	24733687;24735479	-	24733191	24735479	cassetteExon	0.5	100	100	ENSMUST00000070777.13	ENSMUSG00000052752.16	Traf7	chr17	protein_coding	TNF receptor-associated factor 7
chr17	24737467	24737716	-	24735573	24737716	A3SS	0.25	50	50	ENSMUST00000070777.13	ENSMUSG00000052752.16	Traf7	chr17	protein_coding	TNF receptor-associated factor 7
chr17	24733803	24737716	-	24735573	24737716	A3SS&ES	0.25	50	50	ENSMUST00000176668.8	ENSMUSG00000052752.16	Traf7	chr17	protein_coding	TNF receptor-associated factor 7
chr17	24733803	24737716	-	24733803;24735573	24735479;24737716	ES	0.25	50	50	ENSMUST00000176086.8	ENSMUSG00000052752.16	Traf7	chr17	protein_coding	TNF receptor-associated factor 7
chr17	24733191	24735479	-	24733191	24733687	5pMXE	0.5	50	50	ENSMUST00000177502.8	ENSMUSG00000052752.16	Traf7	chr17	protein_coding	TNF receptor-associated factor 7
chr17	24733191;24733803	24733687;24737716	-	24733191;24735570	24735479;24737716	MXE	0.5	100	100	ENSMUST00000176237.8	ENSMUSG00000052752.16	Traf7	chr17	protein_coding	TNF receptor-associated factor 7
chr17	24732058	24732873	-	24732058	24732167	5pMXE	0.5	50	50	ENSMUST00000176633.2	ENSMUSG00000052752.16	Traf7	chr17	protein_coding	TNF receptor-associated factor 7
chr17	24732058	24732873	-	24732350	24732873	3pMXE	0.5	50	50	ENSMUST00000176324.8	ENSMUSG00000052752.16	Traf7	chr17	protein_coding	TNF receptor-associated factor 7
chr17	24737467	24737716	-	24733803	24737716	A3SS	0.25	50	50	ENSMUST00000176178.8	ENSMUSG00000052752.16	Traf7	chr17	protein_coding	TNF receptor-associated factor 7
chr17	24733803	24737716	-	24735570	24737716	A3SS&ES	0.25	50	50	ENSMUST00000177405.8	ENSMUSG00000052752.16	Traf7	chr17	protein_coding	TNF receptor-associated factor 7
chr17	24733191	24735479	-	24733803	24735479	3pMXE	0.33	50	50	ENSMUST00000177025.2	ENSMUSG00000052752.16	Traf7	chr17	protein_coding	TNF receptor-associated factor 7
chr17	24749417	24749617	-	24746935	24749617	A3SS	0.5	50	50	ENSMUST00000061764.14	ENSMUSG00000079657.11	Rab26	chr17	protein_coding	RAB26, member RAS oncogene family
chr17	24756983	24763630	+	24756983	24765028	A3SS	0.5	50	50	ENSMUST00000234740.2	ENSMUSG00000117423.2	Gm33508	chr17	lncRNA	predicted gene, 33508
chr17	24805562	24806374	+	24805562;24806266	24806153;24806374	ES	0.5	50	50	ENSMUST00000035565.5	ENSMUSG00000032855.7	Pkd1	chr17	protein_coding	polycystin 1, transient receptor poteintial channel interacting
chr17	24810455	24811585	+	24810455;24810951	24810812;24811585	ES	0.5	50	50	ENSMUST00000035565.5	ENSMUSG00000032855.7	Pkd1	chr17	protein_coding	polycystin 1, transient receptor poteintial channel interacting
chr17	24787313	24787603	+	24787313	24787600	A3SS	0.5	50	50	ENSMUST00000035565.5	ENSMUSG00000032855.7	Pkd1	chr17	protein_coding	polycystin 1, transient receptor poteintial channel interacting
chr17	24809911	24810149	+	24809911	24809989	A3SS	0.5	50	50	ENSMUST00000035565.5	ENSMUSG00000032855.7	Pkd1	chr17	protein_coding	polycystin 1, transient receptor poteintial channel interacting
chr17	24797144	24797785	+	24797512	24797785	A5SS&ES	0.5	50	50	ENSMUST00000035565.5	ENSMUSG00000032855.7	Pkd1	chr17	protein_coding	polycystin 1, transient receptor poteintial channel interacting
chr17	24823966	24826411	-	24823966;24825326	24825198;24826411	ES	0.33	50	50	ENSMUST00000226284.2	ENSMUSG00000002496.11	Tsc2	chr17	protein_coding	TSC complex subunit 2
chr17	24819439;24820431	24820363;24821068	-	24819439	24821068	cassetteExon	0.5	100	100	ENSMUST00000226284.2	ENSMUSG00000002496.11	Tsc2	chr17	protein_coding	TSC complex subunit 2
chr17	24816037	24816179	-	24816111	24816179	A3SS	0.5	50	50	ENSMUST00000226284.2	ENSMUSG00000002496.11	Tsc2	chr17	protein_coding	TSC complex subunit 2
chr17	24823963	24825198	-	24823966	24825198	A3SS	0.5	50	50	ENSMUST00000226284.2	ENSMUSG00000002496.11	Tsc2	chr17	protein_coding	TSC complex subunit 2
chr17	24823963	24826411	-	24825326	24826411	A3SS&ES	0.33	50	50	ENSMUST00000226284.2	ENSMUSG00000002496.11	Tsc2	chr17	protein_coding	TSC complex subunit 2
chr17	24851080	24851512	-	24851085	24851512	A3SS	0.5	50	50	ENSMUST00000226284.2	ENSMUSG00000002496.11	Tsc2	chr17	protein_coding	TSC complex subunit 2
chr17	24822272	24823002	-	24822272	24823280	A5SS	0.5	50	50	ENSMUST00000226284.2	ENSMUSG00000002496.11	Tsc2	chr17	protein_coding	TSC complex subunit 2
chr17	24849973	24850971	-	24849973	24850919	A5SS	0.5	50	50	ENSMUST00000226284.2	ENSMUSG00000002496.11	Tsc2	chr17	protein_coding	TSC complex subunit 2
chr17	24851085	24851188	-	24851085	24851512	A5SS	0.5	50	50	ENSMUST00000226284.2	ENSMUSG00000002496.11	Tsc2	chr17	protein_coding	TSC complex subunit 2
chr17	24823963	24826411	-	24823966	24826411	A3SS	0.33	50	50	ENSMUST00000097373.2	ENSMUSG00000002496.11	Tsc2	chr17	protein_coding	TSC complex subunit 2
chr17	24823963;24825326	24825198;24826411	-	24823963	24826411	cassetteExon	0.5	100	100	ENSMUST00000228412.2	ENSMUSG00000002496.11	Tsc2	chr17	protein_coding	TSC complex subunit 2
chr17	24823966	24826411	-	24823966	24825198	5pMXE	0.5	50	50	ENSMUST00000226428.2	ENSMUSG00000002496.11	Tsc2	chr17	protein_coding	TSC complex subunit 2
chr17	24823966	24826411	-	24825326	24826411	A3SS&ES	0.33	50	50	ENSMUST00000227658.2	ENSMUSG00000002496.11	Tsc2	chr17	protein_coding	TSC complex subunit 2
chr17	24823963	24826411	-	24823963	24825198	5pMXE	0.5	50	50	ENSMUST00000228729.2	ENSMUSG00000002496.11	Tsc2	chr17	protein_coding	TSC complex subunit 2
chr17	24851737	24852901	+	24852832	24852901	A5SS	0.33	50	50	ENSMUST00000234308.2	ENSMUSG00000041429.4	Nthl1	chr17	protein_coding	nth (endonuclease III)-like 1 (E.coli)
chr17	24851828	24852901	+	24852832	24852901	A5SS	0.33	50	50	ENSMUST00000234308.2	ENSMUSG00000041429.4	Nthl1	chr17	protein_coding	nth (endonuclease III)-like 1 (E.coli)
chr17	24851737	24852901	+	24851828	24852901	A5SS	0.33	50	50	ENSMUST00000234260.2	ENSMUSG00000041429.4	Nthl1	chr17	protein_coding	nth (endonuclease III)-like 1 (E.coli)
chr17	24859363	24860683	-	24859363;24859631	24859569;24860683	ES	0.5	50	50	ENSMUST00000019684.13	ENSMUSG00000002504.16	Slc9a3r2	chr17	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2
chr17	24861344	24866501	-	24861344	24863793	5pMXE	0.5	50	50	ENSMUST00000019684.13	ENSMUSG00000002504.16	Slc9a3r2	chr17	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2
chr17	24861344	24866501	-	24860726	24866501	A3SS	0.5	50	50	ENSMUST00000234912.2	ENSMUSG00000002504.16	Slc9a3r2	chr17	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2
chr17	24860726	24860793	-	24860726	24866501	A5SS	0.5	50	50	ENSMUST00000234912.2	ENSMUSG00000002504.16	Slc9a3r2	chr17	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2
chr17	24860726	24866501	-	24860726;24861344	24860793;24866501	ES	0.5	50	50	ENSMUST00000235042.2	ENSMUSG00000002504.16	Slc9a3r2	chr17	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2
chr17	24897678	24898011	+	24897687	24898011	A5SS	0.5	50	50	ENSMUST00000234956.2	ENSMUSG00000041130.11	Zfp598	chr17	protein_coding	zinc finger protein 598
chr17	24906714	24908695	-	24906714	24907068	5pMXE	0.5	50	50	ENSMUST00000130936.3	ENSMUSG00000007021.6	Syngr3	chr17	protein_coding	synaptogyrin 3
chr17	24913416	24914228	-	24913416	24913765	5pMXE	0.5	50	50	ENSMUST00000234811.2	ENSMUSG00000040888.11	Gfer	chr17	protein_coding	growth factor, augmenter of liver regeneration
chr17	24914391	24914805	-	24914424	24914805	A3SS	0.5	50	50	ENSMUST00000234197.2	ENSMUSG00000040888.11	Gfer	chr17	protein_coding	growth factor, augmenter of liver regeneration
chr17	24918631	24919095	+	24918631;24918989	24918872;24919095	ES	0.33	50	50	ENSMUST00000019464.8	ENSMUSG00000019320.15	Noxo1	chr17	protein_coding	NADPH oxidase organizer 1
chr17	24917075	24917194	+	24916098	24917194	A5SS	0.5	50	50	ENSMUST00000019464.8	ENSMUSG00000019320.15	Noxo1	chr17	protein_coding	NADPH oxidase organizer 1
chr17	24918631	24919095	+	24918989	24919095	A5SS	0.33	50	50	ENSMUST00000123026.8	ENSMUSG00000019320.15	Noxo1	chr17	protein_coding	NADPH oxidase organizer 1
chr17	24917572	24917760	+	24917572	24919095	A3SS	0.5	50	50	ENSMUST00000141522.2	ENSMUSG00000019320.15	Noxo1	chr17	protein_coding	NADPH oxidase organizer 1
chr17	24918631	24919095	+	24917572	24919095	A5SS	0.33	50	50	ENSMUST00000141522.2	ENSMUSG00000019320.15	Noxo1	chr17	protein_coding	NADPH oxidase organizer 1
chr17	24918989	24919095	+	24917572	24919095	A5SS	0.33	50	50	ENSMUST00000141522.2	ENSMUSG00000019320.15	Noxo1	chr17	protein_coding	NADPH oxidase organizer 1
chr17	24921042	24921119	-	24921021	24921119	A3SS	0.5	50	50	ENSMUST00000126319.8	ENSMUSG00000040688.17	Tbl3	chr17	protein_coding	transducin (beta)-like 3
chr17	24936501	24936957	-	24936582	24936957	A3SS	0.5	50	50	ENSMUST00000008626.10	ENSMUSG00000008482.10	Rnf151	chr17	protein_coding	ring finger protein 151
chr17	24940701	24940777	+	24940688	24940777	A5SS	0.5	50	50	ENSMUST00000170715.8	ENSMUSG00000044533.16	Rps2	chr17	protein_coding	ribosomal protein S2
chr17	24941812	24943161	-	24941767	24943161	A3SS	0.33	50	50	ENSMUST00000129451.2	ENSMUSG00000040048.15	Ndufb10	chr17	protein_coding	NADH:ubiquinone oxidoreductase subunit B10
chr17	24941963	24943161	-	24941767	24943161	A3SS	0.33	50	50	ENSMUST00000129451.2	ENSMUSG00000040048.15	Ndufb10	chr17	protein_coding	NADH:ubiquinone oxidoreductase subunit B10
chr17	24941963	24943161	-	24941812	24943161	A3SS	0.33	50	50	ENSMUST00000135708.2	ENSMUSG00000040048.15	Ndufb10	chr17	protein_coding	NADH:ubiquinone oxidoreductase subunit B10
chr17	24947192	24947291	+	24946860	24947291	A5SS	0.5	50	50	ENSMUST00000170239.9	ENSMUSG00000002500.16	Rpl3l	chr17	protein_coding	ribosomal protein L3-like
chr17	24951881	24952283	+	24951445	24952283	A5SS	0.5	50	50	ENSMUST00000170239.9	ENSMUSG00000002500.16	Rpl3l	chr17	protein_coding	ribosomal protein L3-like
chr17	24972442	24976935	+	24975518	24976935	A5SS&ES	0.33	50	50	ENSMUST00000234340.2	ENSMUSG00000039628.10	Hs3st6	chr17	protein_coding	heparan sulfate (glucosamine) 3-O-sulfotransferase 6
chr17	24972472	24975427	+	24972503	24975427	A5SS	0.5	50	50	ENSMUST00000234340.2	ENSMUSG00000039628.10	Hs3st6	chr17	protein_coding	heparan sulfate (glucosamine) 3-O-sulfotransferase 6
chr17	24972472	24976935	+	24975518	24976935	A5SS&ES	0.33	50	50	ENSMUST00000234340.2	ENSMUSG00000039628.10	Hs3st6	chr17	protein_coding	heparan sulfate (glucosamine) 3-O-sulfotransferase 6
chr17	24972472;24975518	24975427;24976935	+	24972472	24976935	cassetteExon	0.5	100	100	ENSMUST00000044922.8	ENSMUSG00000039628.10	Hs3st6	chr17	protein_coding	heparan sulfate (glucosamine) 3-O-sulfotransferase 6
chr17	24972442	24976935	+	24972472	24976935	A5SS	0.33	50	50	ENSMUST00000044922.8	ENSMUSG00000039628.10	Hs3st6	chr17	protein_coding	heparan sulfate (glucosamine) 3-O-sulfotransferase 6
chr17	25035563;25037382	25037251;25038846	+	25035563	25038846	cassetteExon	0.5	100	100	ENSMUST00000234372.2	ENSMUSG00000024155.9	Meiob	chr17	protein_coding	meiosis specific with OB domains
chr17	25072670	25073055	+	25072670	25075612	A3SS	0.5	50	50	ENSMUST00000164251.8	ENSMUSG00000024158.18	Hagh	chr17	protein_coding	hydroxyacyl glutathione hydrolase
chr17	25069642	25071705	+	25059255	25071705	A5SS	0.25	50	50	ENSMUST00000164251.8	ENSMUSG00000024158.18	Hagh	chr17	protein_coding	hydroxyacyl glutathione hydrolase
chr17	25069729	25071705	+	25059255	25071705	A5SS	0.25	50	50	ENSMUST00000164251.8	ENSMUSG00000024158.18	Hagh	chr17	protein_coding	hydroxyacyl glutathione hydrolase
chr17	25070057	25071705	+	25059255	25071705	A5SS	0.25	50	50	ENSMUST00000164251.8	ENSMUSG00000024158.18	Hagh	chr17	protein_coding	hydroxyacyl glutathione hydrolase
chr17	25077283	25079920	+	25076598	25079920	A5SS	0.5	50	50	ENSMUST00000164251.8	ENSMUSG00000024158.18	Hagh	chr17	protein_coding	hydroxyacyl glutathione hydrolase
chr17	25069729	25071705	+	25069642	25071705	A5SS	0.25	50	50	ENSMUST00000118788.8	ENSMUSG00000024158.18	Hagh	chr17	protein_coding	hydroxyacyl glutathione hydrolase
chr17	25070057	25071705	+	25069642	25071705	A5SS	0.25	50	50	ENSMUST00000118788.8	ENSMUSG00000024158.18	Hagh	chr17	protein_coding	hydroxyacyl glutathione hydrolase
chr17	25070057	25071705	+	25069729	25071705	A5SS	0.25	50	50	ENSMUST00000130989.8	ENSMUSG00000024158.18	Hagh	chr17	protein_coding	hydroxyacyl glutathione hydrolase
chr17	25095195	25098989	+	25095195	25098927	A3SS	0.5	50	50	ENSMUST00000234675.2	ENSMUSG00000046070.10	Igfals	chr17	protein_coding	insulin-like growth factor binding protein, acid labile subunit
chr17	25096896	25098927	+	25095195	25098927	A5SS	0.25	50	50	ENSMUST00000234675.2	ENSMUSG00000046070.10	Igfals	chr17	protein_coding	insulin-like growth factor binding protein, acid labile subunit
chr17	25097377	25098927	+	25095195	25098927	A5SS	0.25	50	50	ENSMUST00000234675.2	ENSMUSG00000046070.10	Igfals	chr17	protein_coding	insulin-like growth factor binding protein, acid labile subunit
chr17	25097798	25098927	+	25095195	25098927	A5SS	0.25	50	50	ENSMUST00000234675.2	ENSMUSG00000046070.10	Igfals	chr17	protein_coding	insulin-like growth factor binding protein, acid labile subunit
chr17	25097798	25098989	+	25095195	25098989	A5SS	0.5	50	50	ENSMUST00000234802.2	ENSMUSG00000046070.10	Igfals	chr17	protein_coding	insulin-like growth factor binding protein, acid labile subunit
chr17	25097377	25098927	+	25096896	25098927	A5SS	0.25	50	50	ENSMUST00000234862.2	ENSMUSG00000046070.10	Igfals	chr17	protein_coding	insulin-like growth factor binding protein, acid labile subunit
chr17	25097798	25098927	+	25096896	25098927	A5SS	0.25	50	50	ENSMUST00000234862.2	ENSMUSG00000046070.10	Igfals	chr17	protein_coding	insulin-like growth factor binding protein, acid labile subunit
chr17	25097798	25098927	+	25097377	25098927	A5SS	0.25	50	50	ENSMUST00000234188.2	ENSMUSG00000046070.10	Igfals	chr17	protein_coding	insulin-like growth factor binding protein, acid labile subunit
chr17	25097798	25098989	+	25097798	25098927	A3SS	0.5	50	50	ENSMUST00000050714.8	ENSMUSG00000046070.10	Igfals	chr17	protein_coding	insulin-like growth factor binding protein, acid labile subunit
chr17	25102288	25103099	-	25102288;25102849	25102780;25103099	ES	0.33	50	50	ENSMUST00000234579.2	ENSMUSG00000039183.7	Nubp2	chr17	protein_coding	nucleotide binding protein 2
chr17	25103529	25104693	-	25103529;25104591	25104393;25104693	ES	0.33	50	50	ENSMUST00000234579.2	ENSMUSG00000039183.7	Nubp2	chr17	protein_coding	nucleotide binding protein 2
chr17	25102383	25102780	-	25102288	25102780	A3SS	0.5	50	50	ENSMUST00000234579.2	ENSMUSG00000039183.7	Nubp2	chr17	protein_coding	nucleotide binding protein 2
chr17	25102863	25103099	-	25102849	25103099	A3SS	0.33	50	50	ENSMUST00000234579.2	ENSMUSG00000039183.7	Nubp2	chr17	protein_coding	nucleotide binding protein 2
chr17	25103457	25104393	-	25103529	25104393	A3SS	0.25	50	50	ENSMUST00000234579.2	ENSMUSG00000039183.7	Nubp2	chr17	protein_coding	nucleotide binding protein 2
chr17	25103488	25104393	-	25103529	25104393	A3SS	0.25	50	50	ENSMUST00000234579.2	ENSMUSG00000039183.7	Nubp2	chr17	protein_coding	nucleotide binding protein 2
chr17	25103560	25104393	-	25103529	25104393	A3SS	0.25	50	50	ENSMUST00000234579.2	ENSMUSG00000039183.7	Nubp2	chr17	protein_coding	nucleotide binding protein 2
chr17	25104608	25104693	-	25104591	25104693	A3SS	0.33	50	50	ENSMUST00000234579.2	ENSMUSG00000039183.7	Nubp2	chr17	protein_coding	nucleotide binding protein 2
chr17	25104811	25105253	-	25104837	25105253	A3SS	0.5	50	50	ENSMUST00000234579.2	ENSMUSG00000039183.7	Nubp2	chr17	protein_coding	nucleotide binding protein 2
chr17	25103529	25104693	-	25103529	25104393	5pMXE	0.5	50	50	ENSMUST00000234598.2	ENSMUSG00000039183.7	Nubp2	chr17	protein_coding	nucleotide binding protein 2
chr17	25102288;25102863	25102780;25103099	-	25102288	25103099	cassetteExon	0.5	100	100	ENSMUST00000234598.2	ENSMUSG00000039183.7	Nubp2	chr17	protein_coding	nucleotide binding protein 2
chr17	25103457	25104393	-	25103488	25104393	A3SS	0.25	50	50	ENSMUST00000234674.2	ENSMUSG00000039183.7	Nubp2	chr17	protein_coding	nucleotide binding protein 2
chr17	25103529	25104693	-	25104591	25104693	A3SS&ES	0.33	50	50	ENSMUST00000234674.2	ENSMUSG00000039183.7	Nubp2	chr17	protein_coding	nucleotide binding protein 2
chr17	25103560	25104393	-	25103488	25104393	A3SS	0.25	50	50	ENSMUST00000234674.2	ENSMUSG00000039183.7	Nubp2	chr17	protein_coding	nucleotide binding protein 2
chr17	25103529;25104608	25104393;25104693	-	25103529	25104693	cassetteExon	0.5	100	100	ENSMUST00000234261.2	ENSMUSG00000039183.7	Nubp2	chr17	protein_coding	nucleotide binding protein 2
chr17	25104811	25105265	-	25104811	25105253	A5SS	0.5	50	50	ENSMUST00000234098.2	ENSMUSG00000039183.7	Nubp2	chr17	protein_coding	nucleotide binding protein 2
chr17	25102288	25103099	-	25102849	25103099	A3SS&ES	0.33	50	50	ENSMUST00000234968.2	ENSMUSG00000039183.7	Nubp2	chr17	protein_coding	nucleotide binding protein 2
chr17	25103457	25104393	-	25103560	25104393	A3SS	0.25	50	50	ENSMUST00000234489.2	ENSMUSG00000039183.7	Nubp2	chr17	protein_coding	nucleotide binding protein 2
chr17	25106891;25108142	25108060;25109257	+	25106891	25109257	cassetteExon	0.5	100	100	ENSMUST00000117890.8	ENSMUSG00000024160.17	Spsb3	chr17	protein_coding	splA/ryanodine receptor domain and SOCS box containing 3
chr17	25109434	25109526	+	25109434	25109542	A3SS	0.5	50	50	ENSMUST00000117890.8	ENSMUSG00000024160.17	Spsb3	chr17	protein_coding	splA/ryanodine receptor domain and SOCS box containing 3
chr17	25110110	25110279	+	25110110	25110334	A3SS	0.5	50	50	ENSMUST00000117890.8	ENSMUSG00000024160.17	Spsb3	chr17	protein_coding	splA/ryanodine receptor domain and SOCS box containing 3
chr17	25106079	25106754	+	25105734	25106754	A5SS	0.33	50	50	ENSMUST00000117890.8	ENSMUSG00000024160.17	Spsb3	chr17	protein_coding	splA/ryanodine receptor domain and SOCS box containing 3
chr17	25106562	25106754	+	25105734	25106754	A5SS	0.33	50	50	ENSMUST00000117890.8	ENSMUSG00000024160.17	Spsb3	chr17	protein_coding	splA/ryanodine receptor domain and SOCS box containing 3
chr17	25106562	25106754	+	25106079	25106754	A5SS	0.33	50	50	ENSMUST00000168265.8	ENSMUSG00000024160.17	Spsb3	chr17	protein_coding	splA/ryanodine receptor domain and SOCS box containing 3
chr17	25111657	25113105	-	25112616	25113105	A3SS&ES	0.5	50	50	ENSMUST00000119848.8	ENSMUSG00000073436.12	Eme2	chr17	protein_coding	essential meiotic structure-specific endonuclease subunit 2
chr17	25111941	25112013	-	25111918	25112013	A3SS	0.5	50	50	ENSMUST00000119848.8	ENSMUSG00000073436.12	Eme2	chr17	protein_coding	essential meiotic structure-specific endonuclease subunit 2
chr17	25111657	25111729	-	25111657	25113105	A5SS	0.5	50	50	ENSMUST00000156659.8	ENSMUSG00000073436.12	Eme2	chr17	protein_coding	essential meiotic structure-specific endonuclease subunit 2
chr17	25126360	25128124	-	25126360;25127402	25127385;25128124	ES	0.5	50	50	ENSMUST00000146923.8	ENSMUSG00000024163.18	Mapk8ip3	chr17	protein_coding	mitogen-activated protein kinase 8 interacting protein 3
chr17	25137113;25139469	25139446;25142790	-	25137113	25142790	cassetteExon	0.5	100	100	ENSMUST00000146923.8	ENSMUSG00000024163.18	Mapk8ip3	chr17	protein_coding	mitogen-activated protein kinase 8 interacting protein 3
chr17	25137110	25142790	-	25137113	25142790	A3SS	0.33	50	50	ENSMUST00000146923.8	ENSMUSG00000024163.18	Mapk8ip3	chr17	protein_coding	mitogen-activated protein kinase 8 interacting protein 3
chr17	25124272	25125148	-	25124272	25125121	A5SS	0.5	50	50	ENSMUST00000146923.8	ENSMUSG00000024163.18	Mapk8ip3	chr17	protein_coding	mitogen-activated protein kinase 8 interacting protein 3
chr17	25127402	25131710	-	25127402	25128124	A5SS&ES	0.5	50	50	ENSMUST00000146923.8	ENSMUSG00000024163.18	Mapk8ip3	chr17	protein_coding	mitogen-activated protein kinase 8 interacting protein 3
chr17	25133679	25135478	-	25133679	25136969	A5SS	0.33	50	50	ENSMUST00000146923.8	ENSMUSG00000024163.18	Mapk8ip3	chr17	protein_coding	mitogen-activated protein kinase 8 interacting protein 3
chr17	25133679	25137062	-	25133679	25136969	A5SS	0.33	50	50	ENSMUST00000146923.8	ENSMUSG00000024163.18	Mapk8ip3	chr17	protein_coding	mitogen-activated protein kinase 8 interacting protein 3
chr17	25137110	25142790	-	25139469	25142790	A3SS&ES	0.33	50	50	ENSMUST00000115229.10	ENSMUSG00000024163.18	Mapk8ip3	chr17	protein_coding	mitogen-activated protein kinase 8 interacting protein 3
chr17	25126360	25128124	-	25126360	25127385	A5SS&ES	0.5	50	50	ENSMUST00000115229.10	ENSMUSG00000024163.18	Mapk8ip3	chr17	protein_coding	mitogen-activated protein kinase 8 interacting protein 3
chr17	25133679	25135478	-	25133679	25137062	A5SS	0.33	50	50	ENSMUST00000117509.8	ENSMUSG00000024163.18	Mapk8ip3	chr17	protein_coding	mitogen-activated protein kinase 8 interacting protein 3
chr17	25115927	25116188	+	25115927;25116114	25116002;25116188	ES	0.5	50	50	ENSMUST00000154236.2	ENSMUSG00000038880.14	Mrps34	chr17	protein_coding	mitochondrial ribosomal protein S34
chr17	25115533	25115609	+	25115533	25115602	A3SS	0.5	50	50	ENSMUST00000024978.7	ENSMUSG00000073435.11	Nme3	chr17	protein_coding	NME/NM23 nucleoside diphosphate kinase 3
chr17	25167754	25179542	-	25167754;25175140	25174992;25179542	ES	0.5	50	50	ENSMUST00000233067.2	ENSMUSG00000024165.10	Jpt2	chr17	protein_coding	Jupiter microtubule associated homolog 2
chr17	25175140	25179466	-	25175140	25179542	A5SS	0.5	50	50	ENSMUST00000233067.2	ENSMUSG00000024165.10	Jpt2	chr17	protein_coding	Jupiter microtubule associated homolog 2
chr17	25167754	25179542	-	25167754	25174992	A5SS&ES	0.5	50	50	ENSMUST00000233481.2	ENSMUSG00000024165.10	Jpt2	chr17	protein_coding	Jupiter microtubule associated homolog 2
chr17	25232999	25234405	-	25232999	25234101	5pMXE	0.33	50	50	ENSMUST00000073337.8	ENSMUSG00000038002.10	Cramp1l	chr17	protein_coding	cramped chromatin regulator homolog 1
chr17	25232999	25234504	-	25232999	25234101	5pMXE	0.33	50	50	ENSMUST00000073337.8	ENSMUSG00000038002.10	Cramp1l	chr17	protein_coding	cramped chromatin regulator homolog 1
chr17	25232999	25234405	-	25232999	25234504	A5SS	0.33	50	50	ENSMUST00000233774.2	ENSMUSG00000038002.10	Cramp1l	chr17	protein_coding	cramped chromatin regulator homolog 1
chr17	25244920	25251059	+	25244920;25247953	25247778;25251059	ES	0.5	50	50	ENSMUST00000142000.9	ENSMUSG00000024169.17	Ift140	chr17	protein_coding	intraflagellar transport 140
chr17	25235110	25237735	+	25235878	25237735	A5SS	0.33	50	50	ENSMUST00000142000.9	ENSMUSG00000024169.17	Ift140	chr17	protein_coding	intraflagellar transport 140
chr17	25235573	25237735	+	25235878	25237735	A5SS	0.33	50	50	ENSMUST00000142000.9	ENSMUSG00000024169.17	Ift140	chr17	protein_coding	intraflagellar transport 140
chr17	25235573	25237735	+	25235110	25237735	A5SS	0.33	50	50	ENSMUST00000137386.8	ENSMUSG00000024169.17	Ift140	chr17	protein_coding	intraflagellar transport 140
chr17	25267504	25269248	+	25267504	25274532	A3SS	0.5	50	50	ENSMUST00000140692.8	ENSMUSG00000024169.17	Ift140	chr17	protein_coding	intraflagellar transport 140
chr17	25270877	25274532	+	25267504	25274532	A5SS	0.5	50	50	ENSMUST00000140692.8	ENSMUSG00000024169.17	Ift140	chr17	protein_coding	intraflagellar transport 140
chr17	25289338	25300390	-	25289338	25299238	5pMXE	0.25	50	50	ENSMUST00000024984.7	ENSMUSG00000024168.9	Tmem204	chr17	protein_coding	transmembrane protein 204
chr17	25289338	25297023	-	25289338	25299238	A5SS	0.25	50	50	ENSMUST00000024984.7	ENSMUSG00000024168.9	Tmem204	chr17	protein_coding	transmembrane protein 204
chr17	25289338	25299355	-	25289338	25299238	A5SS	0.25	50	50	ENSMUST00000024984.7	ENSMUSG00000024168.9	Tmem204	chr17	protein_coding	transmembrane protein 204
chr17	25289338	25300390	-	25289338	25299355	5pMXE	0.25	50	50	ENSMUST00000232699.2	ENSMUSG00000024168.9	Tmem204	chr17	protein_coding	transmembrane protein 204
chr17	25289338	25297023	-	25289338	25299355	A5SS	0.25	50	50	ENSMUST00000232699.2	ENSMUSG00000024168.9	Tmem204	chr17	protein_coding	transmembrane protein 204
chr17	25289338	25297023	-	25289338	25300390	A5SS	0.25	50	50	ENSMUST00000233505.2	ENSMUSG00000024168.9	Tmem204	chr17	protein_coding	transmembrane protein 204
chr17	25330158	25333911	-	25330158;25332231	25331954;25333911	ES	0.5	50	50	ENSMUST00000155607.8	ENSMUSG00000024170.16	Telo2	chr17	protein_coding	telomere maintenance 2
chr17	25320678;25321702	25321611;25322554	-	25320678	25322554	cassetteExon	0.5	100	100	ENSMUST00000155607.8	ENSMUSG00000024170.16	Telo2	chr17	protein_coding	telomere maintenance 2
chr17	25318968	25324963	-	25324817	25324963	A3SS&ES	0.5	50	50	ENSMUST00000155607.8	ENSMUSG00000024170.16	Telo2	chr17	protein_coding	telomere maintenance 2
chr17	25320678	25320985	-	25320678	25322554	A5SS	0.33	50	50	ENSMUST00000155607.8	ENSMUSG00000024170.16	Telo2	chr17	protein_coding	telomere maintenance 2
chr17	25334259	25334414	-	25334259	25334387	A5SS	0.5	50	50	ENSMUST00000155607.8	ENSMUSG00000024170.16	Telo2	chr17	protein_coding	telomere maintenance 2
chr17	25320678	25321611	-	25320678;25321084	25320985;25321611	ES	0.5	50	50	ENSMUST00000115181.9	ENSMUSG00000024170.16	Telo2	chr17	protein_coding	telomere maintenance 2
chr17	25330158	25333911	-	25330158	25331954	5pMXE	0.5	50	50	ENSMUST00000151205.2	ENSMUSG00000024170.16	Telo2	chr17	protein_coding	telomere maintenance 2
chr17	25330158	25333911	-	25332231	25333911	3pMXE	0.5	50	50	ENSMUST00000139196.2	ENSMUSG00000024170.16	Telo2	chr17	protein_coding	telomere maintenance 2
chr17	25339965	25341758	+	25339965	25341668	A3SS	0.5	50	50	ENSMUST00000054930.7	ENSMUSG00000044172.8	Ptx4	chr17	protein_coding	pentraxin 4
chr17	25341877	25343548	+	25342322	25343548	A5SS	0.5	50	50	ENSMUST00000054930.7	ENSMUSG00000044172.8	Ptx4	chr17	protein_coding	pentraxin 4
chr17	25341877;25342322	25342216;25343548	+	25341877	25343548	cassetteExon	0.5	100	100	ENSMUST00000233502.2	ENSMUSG00000044172.8	Ptx4	chr17	protein_coding	pentraxin 4
chr17	25372128	25372706	+	25372128	25372535	A3SS	0.5	50	50	ENSMUST00000162862.3	ENSMUSG00000036636.11	Clcn7	chr17	protein_coding	chloride channel, voltage-sensitive 7
chr17	25355737	25363404	+	25352588	25363404	A5SS	0.5	50	50	ENSMUST00000162862.3	ENSMUSG00000036636.11	Clcn7	chr17	protein_coding	chloride channel, voltage-sensitive 7
chr17	25366734	25368013	+	25366764	25368013	A5SS	0.5	50	50	ENSMUST00000162862.3	ENSMUSG00000036636.11	Clcn7	chr17	protein_coding	chloride channel, voltage-sensitive 7
chr17	25370728	25371322	+	25370732	25371322	A5SS	0.5	50	50	ENSMUST00000162862.3	ENSMUSG00000036636.11	Clcn7	chr17	protein_coding	chloride channel, voltage-sensitive 7
chr17	25382285	25382383	+	25382285	25382477	A3SS	0.5	50	50	ENSMUST00000183178.8	ENSMUSG00000059562.15	Ccdc154	chr17	protein_coding	coiled-coil domain containing 154
chr17	25386790	25386864	+	25386790	25386844	A3SS	0.33	50	50	ENSMUST00000183178.8	ENSMUSG00000059562.15	Ccdc154	chr17	protein_coding	coiled-coil domain containing 154
chr17	25386790	25386870	+	25386790	25386844	A3SS	0.33	50	50	ENSMUST00000183178.8	ENSMUSG00000059562.15	Ccdc154	chr17	protein_coding	coiled-coil domain containing 154
chr17	25389961	25390100	+	25389961	25390094	A3SS	0.5	50	50	ENSMUST00000183178.8	ENSMUSG00000059562.15	Ccdc154	chr17	protein_coding	coiled-coil domain containing 154
chr17	25383604	25386271	+	25385055	25386271	A5SS&ES	0.5	50	50	ENSMUST00000183178.8	ENSMUSG00000059562.15	Ccdc154	chr17	protein_coding	coiled-coil domain containing 154
chr17	25390643	25390733	+	25390648	25390733	A5SS	0.5	50	50	ENSMUST00000183178.8	ENSMUSG00000059562.15	Ccdc154	chr17	protein_coding	coiled-coil domain containing 154
chr17	25386790	25386870	+	25386790	25386864	A3SS	0.33	50	50	ENSMUST00000182621.8	ENSMUSG00000059562.15	Ccdc154	chr17	protein_coding	coiled-coil domain containing 154
chr17	25447640	25449181	+	25447640;25448440	25448213;25449181	ES	0.5	50	50	ENSMUST00000039734.12	ENSMUSG00000015127.15	Unkl	chr17	protein_coding	unkempt family like zinc finger
chr17	25418917;25419902	25419817;25420016	+	25418917	25420016	cassetteExon	0.5	100	100	ENSMUST00000039734.12	ENSMUSG00000015127.15	Unkl	chr17	protein_coding	unkempt family like zinc finger
chr17	25407991	25408440	+	25407466	25408440	A5SS	0.5	50	50	ENSMUST00000039734.12	ENSMUSG00000015127.15	Unkl	chr17	protein_coding	unkempt family like zinc finger
chr17	25441696	25447557	+	25437729	25447557	A5SS	0.33	50	50	ENSMUST00000039734.12	ENSMUSG00000015127.15	Unkl	chr17	protein_coding	unkempt family like zinc finger
chr17	25441879	25447557	+	25437729	25447557	A5SS	0.33	50	50	ENSMUST00000039734.12	ENSMUSG00000015127.15	Unkl	chr17	protein_coding	unkempt family like zinc finger
chr17	25447640	25449181	+	25447640	25448213	3pMXE	0.5	50	50	ENSMUST00000162498.8	ENSMUSG00000015127.15	Unkl	chr17	protein_coding	unkempt family like zinc finger
chr17	25441879	25447557	+	25441696	25447557	A5SS	0.33	50	50	ENSMUST00000162498.8	ENSMUSG00000015127.15	Unkl	chr17	protein_coding	unkempt family like zinc finger
chr17	25454433	25454508	-	25454454	25454508	A3SS	0.5	50	50	ENSMUST00000115154.11	ENSMUSG00000035521.14	Gnptg	chr17	protein_coding	N-acetylglucosamine-1-phosphotransferase, gamma subunit
chr17	25462715	25463080	-	25462715	25462796	5pMXE	0.5	50	50	ENSMUST00000182126.2	ENSMUSG00000047507.13	Baiap3	chr17	protein_coding	BAI1-associated protein 3
chr17	25462715	25463080	-	25462715;25463001	25462796;25463080	ES	0.5	50	50	ENSMUST00000182056.8	ENSMUSG00000047507.13	Baiap3	chr17	protein_coding	BAI1-associated protein 3
chr17	25467541	25468062	-	25467541;25467737	25467630;25468062	ES	0.5	50	50	ENSMUST00000182056.8	ENSMUSG00000047507.13	Baiap3	chr17	protein_coding	BAI1-associated protein 3
chr17	25470098	25470412	-	25470182	25470412	A3SS	0.33	50	50	ENSMUST00000182056.8	ENSMUSG00000047507.13	Baiap3	chr17	protein_coding	BAI1-associated protein 3
chr17	25470113	25470412	-	25470182	25470412	A3SS	0.33	50	50	ENSMUST00000182056.8	ENSMUSG00000047507.13	Baiap3	chr17	protein_coding	BAI1-associated protein 3
chr17	25471118	25472697	-	25471118	25475135	A5SS	0.5	50	50	ENSMUST00000182056.8	ENSMUSG00000047507.13	Baiap3	chr17	protein_coding	BAI1-associated protein 3
chr17	25470113	25470412	-	25470098	25470412	A3SS	0.33	50	50	ENSMUST00000182435.8	ENSMUSG00000047507.13	Baiap3	chr17	protein_coding	BAI1-associated protein 3
chr17	25488453	25493497	-	25488453	25493147	5pMXE	0.16	50	50	ENSMUST00000049911.16	ENSMUSG00000015120.16	Ube2i	chr17	protein_coding	ubiquitin-conjugating enzyme E2I
chr17	25488453	25491512	-	25488453	25493147	A5SS	0.16	50	50	ENSMUST00000049911.16	ENSMUSG00000015120.16	Ube2i	chr17	protein_coding	ubiquitin-conjugating enzyme E2I
chr17	25488453	25492295	-	25488453	25493147	A5SS	0.16	50	50	ENSMUST00000049911.16	ENSMUSG00000015120.16	Ube2i	chr17	protein_coding	ubiquitin-conjugating enzyme E2I
chr17	25488453	25492456	-	25488453	25493147	A5SS	0.16	50	50	ENSMUST00000049911.16	ENSMUSG00000015120.16	Ube2i	chr17	protein_coding	ubiquitin-conjugating enzyme E2I
chr17	25488453	25493136	-	25488453	25493147	A5SS	0.16	50	50	ENSMUST00000049911.16	ENSMUSG00000015120.16	Ube2i	chr17	protein_coding	ubiquitin-conjugating enzyme E2I
chr17	25488453	25492295	-	25488453;25491739	25491512;25492295	ES	0.5	50	50	ENSMUST00000173084.8	ENSMUSG00000015120.16	Ube2i	chr17	protein_coding	ubiquitin-conjugating enzyme E2I
chr17	25491739	25492456	-	25491739	25492295	5pMXE	0.33	50	50	ENSMUST00000173084.8	ENSMUSG00000015120.16	Ube2i	chr17	protein_coding	ubiquitin-conjugating enzyme E2I
chr17	25491739	25491971	-	25491739	25492295	A5SS	0.33	50	50	ENSMUST00000173084.8	ENSMUSG00000015120.16	Ube2i	chr17	protein_coding	ubiquitin-conjugating enzyme E2I
chr17	25488453	25493497	-	25488453	25493136	5pMXE	0.16	50	50	ENSMUST00000173713.8	ENSMUSG00000015120.16	Ube2i	chr17	protein_coding	ubiquitin-conjugating enzyme E2I
chr17	25488453	25491512	-	25488453	25493136	A5SS	0.16	50	50	ENSMUST00000173713.8	ENSMUSG00000015120.16	Ube2i	chr17	protein_coding	ubiquitin-conjugating enzyme E2I
chr17	25488453	25492295	-	25488453	25493136	A5SS	0.16	50	50	ENSMUST00000173713.8	ENSMUSG00000015120.16	Ube2i	chr17	protein_coding	ubiquitin-conjugating enzyme E2I
chr17	25488453	25492456	-	25488453	25493136	A5SS	0.16	50	50	ENSMUST00000173713.8	ENSMUSG00000015120.16	Ube2i	chr17	protein_coding	ubiquitin-conjugating enzyme E2I
chr17	25488453	25492456	-	25488453	25491512	A5SS&ES	0.33	50	50	ENSMUST00000172618.8	ENSMUSG00000015120.16	Ube2i	chr17	protein_coding	ubiquitin-conjugating enzyme E2I
chr17	25488453	25493497	-	25488453	25492295	5pMXE	0.16	50	50	ENSMUST00000174031.8	ENSMUSG00000015120.16	Ube2i	chr17	protein_coding	ubiquitin-conjugating enzyme E2I
chr17	25488453	25492456	-	25488453	25492295	A5SS	0.16	50	50	ENSMUST00000174031.8	ENSMUSG00000015120.16	Ube2i	chr17	protein_coding	ubiquitin-conjugating enzyme E2I
chr17	25488453	25491512	-	25488453	25493497	A5SS	0.16	50	50	ENSMUST00000174001.8	ENSMUSG00000015120.16	Ube2i	chr17	protein_coding	ubiquitin-conjugating enzyme E2I
chr17	25488453	25492456	-	25488453	25493497	A5SS	0.16	50	50	ENSMUST00000174001.8	ENSMUSG00000015120.16	Ube2i	chr17	protein_coding	ubiquitin-conjugating enzyme E2I
chr17	25488453;25491739	25491512;25492456	-	25488453	25492456	cassetteExon	0.5	100	100	ENSMUST00000173621.8	ENSMUSG00000015120.16	Ube2i	chr17	protein_coding	ubiquitin-conjugating enzyme E2I
chr17	25488453	25492295	-	25488453	25491512	A5SS&ES	0.33	50	50	ENSMUST00000172520.2	ENSMUSG00000015120.16	Ube2i	chr17	protein_coding	ubiquitin-conjugating enzyme E2I
chr17	25491739	25491971	-	25491739	25492456	A5SS	0.33	50	50	ENSMUST00000172520.2	ENSMUSG00000015120.16	Ube2i	chr17	protein_coding	ubiquitin-conjugating enzyme E2I
chr17	25539650	25539849	+	25539650	25539846	A3SS	0.5	50	50	ENSMUST00000024993.9	ENSMUSG00000034039.9	Prss29	chr17	protein_coding	protease, serine 29
chr17	25563890	25564281	-	25563890;25564189	25564024;25564281	ES	0.5	50	50	ENSMUST00000153118.2	ENSMUSG00000024173.12	Tpsab1	chr17	protein_coding	tryptase alpha/beta 1
chr17	25586582	25587807	+	25586582	25586656	3pMXE	0.5	50	50	ENSMUST00000234477.2	ENSMUSG00000033825.11	Tpsb2	chr17	protein_coding	tryptase beta 2
chr17	25588391;25591622	25591451;25592149	+	25588391	25592149	cassetteExon	0.5	100	100	ENSMUST00000160377.8	ENSMUSG00000033200.17	Tpsg1	chr17	protein_coding	tryptase gamma 1
chr17	25589674	25592699	+	25592414	25592699	A5SS&ES	0.5	50	50	ENSMUST00000160377.8	ENSMUSG00000033200.17	Tpsg1	chr17	protein_coding	tryptase gamma 1
chr17	25592009	25592149	+	25588391	25592149	A5SS	0.33	50	50	ENSMUST00000160377.8	ENSMUSG00000033200.17	Tpsg1	chr17	protein_coding	tryptase gamma 1
chr17	25589674	25591451	+	25588391	25591451	A5SS	0.5	50	50	ENSMUST00000160485.8	ENSMUSG00000033200.17	Tpsg1	chr17	protein_coding	tryptase gamma 1
chr17	25592009	25592149	+	25591622	25592149	A5SS	0.33	50	50	ENSMUST00000160485.8	ENSMUSG00000033200.17	Tpsg1	chr17	protein_coding	tryptase gamma 1
chr17	25589674	25591451	+	25589674	25592699	A3SS	0.5	50	50	ENSMUST00000162021.8	ENSMUSG00000033200.17	Tpsg1	chr17	protein_coding	tryptase gamma 1
chr17	25596651	25597755	-	25596651;25596857	25596736;25597755	ES	0.5	50	50	ENSMUST00000159610.8	ENSMUSG00000024112.17	Cacna1h	chr17	protein_coding	calcium channel, voltage-dependent, T type, alpha 1H subunit
chr17	25595927	25596145	-	25595980	25596145	A3SS	0.5	50	50	ENSMUST00000159610.8	ENSMUSG00000024112.17	Cacna1h	chr17	protein_coding	calcium channel, voltage-dependent, T type, alpha 1H subunit
chr17	25597770	25599199	-	25597833	25599199	A3SS	0.5	50	50	ENSMUST00000078496.12	ENSMUSG00000024112.17	Cacna1h	chr17	protein_coding	calcium channel, voltage-dependent, T type, alpha 1H subunit
chr17	25691214	25692710	+	25673724	25692710	A5SS	0.33	50	50	ENSMUST00000234104.2	ENSMUSG00000024175.3	Tekt4	chr17	protein_coding	tektin 4
chr17	25691229	25692710	+	25673724	25692710	A5SS	0.33	50	50	ENSMUST00000234104.2	ENSMUSG00000024175.3	Tekt4	chr17	protein_coding	tektin 4
chr17	25692780	25693090	+	25692857	25693090	A5SS	0.5	50	50	ENSMUST00000234104.2	ENSMUSG00000024175.3	Tekt4	chr17	protein_coding	tektin 4
chr17	25693509	25693614	+	25693233	25693614	A5SS	0.5	50	50	ENSMUST00000234104.2	ENSMUSG00000024175.3	Tekt4	chr17	protein_coding	tektin 4
chr17	25691214	25692710	+	25691229	25692710	A5SS	0.33	50	50	ENSMUST00000234449.2	ENSMUSG00000024175.3	Tekt4	chr17	protein_coding	tektin 4
chr17	25711262	25716096	-	25711262;25714152	25714001;25716096	ES	0.5	50	50	ENSMUST00000051864.5	ENSMUSG00000050824.13	Sstr5	chr17	protein_coding	somatostatin receptor 5
chr17	25787055	25787742	-	25787055	25787802	A5SS	0.5	50	50	ENSMUST00000025003.10	ENSMUSG00000024176.11	Sox8	chr17	protein_coding	SRY (sex determining region Y)-box 8
chr17	25790075;25790627	25790306;25792960	+	25790075	25792960	cassetteExon	0.5	100	100	ENSMUST00000163493.4	ENSMUSG00000091475.5	Cerox1	chr17	lncRNA	cytoplasmic endogenous regulator of oxidative phosphorylation 1
chr17	25804826;25822747	25822737;25831270	+	25804826;25807660	25807650;25831270	MXE	0.5	100	100	ENSMUST00000141606.3	ENSMUSG00000002279.20	Lmf1	chr17	protein_coding	lipase maturation factor 1
chr17	25807660	25815276	+	25807660	25831270	A3SS	0.5	50	50	ENSMUST00000141606.3	ENSMUSG00000002279.20	Lmf1	chr17	protein_coding	lipase maturation factor 1
chr17	25831418	25849581	+	25831418	25850709	A3SS	0.5	50	50	ENSMUST00000141606.3	ENSMUSG00000002279.20	Lmf1	chr17	protein_coding	lipase maturation factor 1
chr17	25864290	25873500	+	25864290	25873394	A3SS	0.5	50	50	ENSMUST00000141606.3	ENSMUSG00000002279.20	Lmf1	chr17	protein_coding	lipase maturation factor 1
chr17	25807716	25831270	+	25807660	25831270	A5SS	0.25	50	50	ENSMUST00000141606.3	ENSMUSG00000002279.20	Lmf1	chr17	protein_coding	lipase maturation factor 1
chr17	25804826;25807716	25807650;25831270	+	25804826;25822747	25822737;25831270	MXE	0.5	100	100	ENSMUST00000063344.15	ENSMUSG00000002279.20	Lmf1	chr17	protein_coding	lipase maturation factor 1
chr17	25798353	25804517	+	25798353	25831270	A3SS	0.5	50	50	ENSMUST00000137201.8	ENSMUSG00000002279.20	Lmf1	chr17	protein_coding	lipase maturation factor 1
chr17	25807660	25831270	+	25798353	25831270	A5SS	0.25	50	50	ENSMUST00000137201.8	ENSMUSG00000002279.20	Lmf1	chr17	protein_coding	lipase maturation factor 1
chr17	25807716	25831270	+	25798353	25831270	A5SS	0.25	50	50	ENSMUST00000137201.8	ENSMUSG00000002279.20	Lmf1	chr17	protein_coding	lipase maturation factor 1
chr17	25822747	25831270	+	25798353	25831270	A5SS	0.25	50	50	ENSMUST00000137201.8	ENSMUSG00000002279.20	Lmf1	chr17	protein_coding	lipase maturation factor 1
chr17	25936555	25937641	+	25936251	25937641	A5SS	0.5	50	50	ENSMUST00000172002.8	ENSMUSG00000025739.14	Gng13	chr17	protein_coding	guanine nucleotide binding protein (G protein), gamma 13
chr17	25938107	25938839	-	25938757	25938839	A3SS&ES	0.5	50	50	ENSMUST00000170575.8	ENSMUSG00000019214.15	Chtf18	chr17	protein_coding	CTF18, chromosome transmission fidelity factor 18
chr17	25943074	25943503	-	25943049	25943503	A3SS	0.5	50	50	ENSMUST00000170575.8	ENSMUSG00000019214.15	Chtf18	chr17	protein_coding	CTF18, chromosome transmission fidelity factor 18
chr17	25946094	25946221	-	25946097	25946221	A3SS	0.5	50	50	ENSMUST00000170575.8	ENSMUSG00000019214.15	Chtf18	chr17	protein_coding	CTF18, chromosome transmission fidelity factor 18
chr17	25946821	25947497	+	25946821;25947365	25947226;25947497	ES	0.5	50	50	ENSMUST00000237183.2	ENSMUSG00000041199.4	Rpusd1	chr17	protein_coding	RNA pseudouridylate synthase domain containing 1
chr17	25946821	25947155	+	25946821	25947226	A3SS	0.25	50	50	ENSMUST00000237183.2	ENSMUSG00000041199.4	Rpusd1	chr17	protein_coding	RNA pseudouridylate synthase domain containing 1
chr17	25946821	25947177	+	25946821	25947226	A3SS	0.25	50	50	ENSMUST00000237183.2	ENSMUSG00000041199.4	Rpusd1	chr17	protein_coding	RNA pseudouridylate synthase domain containing 1
chr17	25946821	25947497	+	25946821;25947365	25947155;25947497	ES	0.5	50	50	ENSMUST00000237785.2	ENSMUSG00000041199.4	Rpusd1	chr17	protein_coding	RNA pseudouridylate synthase domain containing 1
chr17	25946821	25947177	+	25946821	25947155	A3SS	0.25	50	50	ENSMUST00000237785.2	ENSMUSG00000041199.4	Rpusd1	chr17	protein_coding	RNA pseudouridylate synthase domain containing 1
chr17	25946821	25947497	+	25946821;25947365	25947177;25947497	ES	0.5	50	50	ENSMUST00000047273.3	ENSMUSG00000041199.4	Rpusd1	chr17	protein_coding	RNA pseudouridylate synthase domain containing 1
chr17	25968061;25968263	25968148;25968423	-	25968061	25968423	cassetteExon	0.5	100	100	ENSMUST00000075884.8	ENSMUSG00000063011.8	Msln	chr17	protein_coding	mesothelin
chr17	25972036	25972352	-	25972048	25972352	A3SS	0.5	50	50	ENSMUST00000075884.8	ENSMUSG00000063011.8	Msln	chr17	protein_coding	mesothelin
chr17	25969827	25970028	-	25969827	25970053	A5SS	0.5	50	50	ENSMUST00000075884.8	ENSMUSG00000063011.8	Msln	chr17	protein_coding	mesothelin
chr17	25972791	25972905	-	25972791	25973106	A5SS	0.5	50	50	ENSMUST00000075884.8	ENSMUSG00000063011.8	Msln	chr17	protein_coding	mesothelin
chr17	25994115	25995923	+	25994115	25995940	A3SS	0.5	50	50	ENSMUST00000134108.8	ENSMUSG00000002280.12	Ciao3	chr17	protein_coding	cytosolic iron-sulfur assembly component 3
chr17	25999926	26000215	+	25999926	26000167	A3SS	0.5	50	50	ENSMUST00000134108.8	ENSMUSG00000002280.12	Ciao3	chr17	protein_coding	cytosolic iron-sulfur assembly component 3
chr17	26000704	26000990	+	26000819	26000990	A5SS	0.5	50	50	ENSMUST00000134108.8	ENSMUSG00000002280.12	Ciao3	chr17	protein_coding	cytosolic iron-sulfur assembly component 3
chr17	26003699	26004402	-	26003699;26004168	26003978;26004402	ES	0.5	50	50	ENSMUST00000140738.8	ENSMUSG00000061046.10	Haghl	chr17	protein_coding	hydroxyacylglutathione hydrolase-like
chr17	26002152	26002477	-	25999128	26002477	A3SS	0.5	50	50	ENSMUST00000140738.8	ENSMUSG00000061046.10	Haghl	chr17	protein_coding	hydroxyacylglutathione hydrolase-like
chr17	26003699	26004397	-	26003699	26003978	A5SS&ES	0.33	50	50	ENSMUST00000140738.8	ENSMUSG00000061046.10	Haghl	chr17	protein_coding	hydroxyacylglutathione hydrolase-like
chr17	26004168	26004259	-	26004168	26004402	A5SS	0.5	50	50	ENSMUST00000140738.8	ENSMUSG00000061046.10	Haghl	chr17	protein_coding	hydroxyacylglutathione hydrolase-like
chr17	26003699	26004402	-	26003699	26004397	A5SS	0.33	50	50	ENSMUST00000133071.8	ENSMUSG00000061046.10	Haghl	chr17	protein_coding	hydroxyacylglutathione hydrolase-like
chr17	26003699	26004402	-	26003699	26003978	5pMXE	0.33	50	50	ENSMUST00000129917.8	ENSMUSG00000061046.10	Haghl	chr17	protein_coding	hydroxyacylglutathione hydrolase-like
chr17	26010650	26011305	-	26010650	26011027	5pMXE	0.33	50	50	ENSMUST00000237093.2	ENSMUSG00000057411.10	Antkmt	chr17	protein_coding	adenine nucleotide translocase lysine methyltransferase
chr17	26009957	26010320	-	26009292	26010320	A3SS	0.5	50	50	ENSMUST00000237093.2	ENSMUSG00000057411.10	Antkmt	chr17	protein_coding	adenine nucleotide translocase lysine methyltransferase
chr17	26010650	26010976	-	26010650	26011027	A5SS	0.33	50	50	ENSMUST00000237093.2	ENSMUSG00000057411.10	Antkmt	chr17	protein_coding	adenine nucleotide translocase lysine methyltransferase
chr17	26010460	26014348	-	26010460	26010546	5pMXE	0.5	50	50	ENSMUST00000235327.2	ENSMUSG00000057411.10	Antkmt	chr17	protein_coding	adenine nucleotide translocase lysine methyltransferase
chr17	26010650	26010976	-	26010650	26011305	A5SS	0.33	50	50	ENSMUST00000236683.2	ENSMUSG00000057411.10	Antkmt	chr17	protein_coding	adenine nucleotide translocase lysine methyltransferase
chr17	26014265	26014348	-	26010460	26014348	A3SS	0.5	50	50	ENSMUST00000235889.2	ENSMUSG00000118135.2	Gm50367	chr17	protein_coding	predicted gene, 50367
chr17	26015323	26015839	-	26015615	26015839	A3SS	0.5	50	50	ENSMUST00000165838.9	ENSMUSG00000002274.14	Metrn	chr17	protein_coding	meteorin, glial cell differentiation regulator
chr17	26014407	26015060	-	26014407	26015215	A5SS	0.5	50	50	ENSMUST00000165838.9	ENSMUSG00000002274.14	Metrn	chr17	protein_coding	meteorin, glial cell differentiation regulator
chr17	26037162	26037532	+	26037162	26037472	A3SS	0.5	50	50	ENSMUST00000045692.9	ENSMUSG00000025738.9	Fbxl16	chr17	protein_coding	F-box and leucine-rich repeat protein 16
chr17	26043660;26044212	26044071;26044628	+	26043660	26044628	cassetteExon	0.5	100	100	ENSMUST00000026833.6	ENSMUSG00000025737.6	Wdr24	chr17	protein_coding	WD repeat domain 24
chr17	26048827	26048972	+	26048827	26048916	A3SS	0.5	50	50	ENSMUST00000133595.9	ENSMUSG00000025736.16	Jmjd8	chr17	protein_coding	jumonji domain containing 8
chr17	26049403	26049484	+	26049408	26049484	A5SS	0.5	50	50	ENSMUST00000133595.9	ENSMUSG00000025736.16	Jmjd8	chr17	protein_coding	jumonji domain containing 8
chr17	26051280	26051666	-	26051218	26051666	A3SS	0.5	50	50	ENSMUST00000044911.10	ENSMUSG00000039615.10	Stub1	chr17	protein_coding	STIP1 homology and U-Box containing protein 1
chr17	26051218	26052060	-	26051218	26051666	A5SS	0.5	50	50	ENSMUST00000044911.10	ENSMUSG00000039615.10	Stub1	chr17	protein_coding	STIP1 homology and U-Box containing protein 1
chr17	26055167	26055962	-	26055167;26055546	26055385;26055962	ES	0.5	50	50	ENSMUST00000026831.14	ENSMUSG00000025735.14	Rhbdl1	chr17	protein_coding	rhomboid like 1
chr17	26055546	26058266	-	26055546	26055962	5pMXE	0.5	50	50	ENSMUST00000026831.14	ENSMUSG00000025735.14	Rhbdl1	chr17	protein_coding	rhomboid like 1
chr17	26054327	26054444	-	26054351	26054444	A3SS	0.5	50	50	ENSMUST00000026831.14	ENSMUSG00000025735.14	Rhbdl1	chr17	protein_coding	rhomboid like 1
chr17	26055167	26055373	-	26055167	26055385	A5SS	0.33	50	50	ENSMUST00000026831.14	ENSMUSG00000025735.14	Rhbdl1	chr17	protein_coding	rhomboid like 1
chr17	26055167	26055962	-	26055167;26055546	26055373;26055962	ES	0.5	50	50	ENSMUST00000183929.8	ENSMUSG00000025735.14	Rhbdl1	chr17	protein_coding	rhomboid like 1
chr17	26059649	26059810	-	26059725	26059810	A3SS	0.5	50	50	ENSMUST00000176751.2	ENSMUSG00000093593.2	Gm20683	chr17	protein_coding	predicted gene 20683
chr17	26055167	26055962	-	26055167	26055385	A5SS&ES	0.33	50	50	ENSMUST00000176751.2	ENSMUSG00000093593.2	Gm20683	chr17	protein_coding	predicted gene 20683
chr17	26059081	26059196	-	26059081	26059229	A5SS	0.5	50	50	ENSMUST00000176751.2	ENSMUSG00000093593.2	Gm20683	chr17	protein_coding	predicted gene 20683
chr17	26060829	26061154	-	26060829;26061065	26060964;26061154	ES	0.5	50	50	ENSMUST00000043897.16	ENSMUSG00000025733.18	Rhot2	chr17	protein_coding	ras homolog family member T2
chr17	26062955	26063063	-	26062958	26063063	A3SS	0.5	50	50	ENSMUST00000043897.16	ENSMUSG00000025733.18	Rhot2	chr17	protein_coding	ras homolog family member T2
chr17	26063287	26063370	-	26063287	26063374	A5SS	0.33	50	50	ENSMUST00000043897.16	ENSMUSG00000025733.18	Rhot2	chr17	protein_coding	ras homolog family member T2
chr17	26063287	26063521	-	26063287	26063374	A5SS	0.33	50	50	ENSMUST00000043897.16	ENSMUSG00000025733.18	Rhot2	chr17	protein_coding	ras homolog family member T2
chr17	26060829	26061154	-	26061065	26061154	A3SS	0.5	50	50	ENSMUST00000177470.8	ENSMUSG00000025733.18	Rhot2	chr17	protein_coding	ras homolog family member T2
chr17	26060829	26061154	-	26060829	26060964	5pMXE	0.5	50	50	ENSMUST00000177062.8	ENSMUSG00000025733.18	Rhot2	chr17	protein_coding	ras homolog family member T2
chr17	26063287	26063370	-	26063287	26063521	A5SS	0.33	50	50	ENSMUST00000175869.8	ENSMUSG00000025733.18	Rhot2	chr17	protein_coding	ras homolog family member T2
chr17	26076409	26078074	-	26076409;26077778	26077710;26078074	ES	0.5	50	50	ENSMUST00000177170.8	ENSMUSG00000073434.13	Wdr90	chr17	protein_coding	WD repeat domain 90
chr17	26072912	26073012	-	26072826	26073012	A3SS	0.5	50	50	ENSMUST00000177170.8	ENSMUSG00000073434.13	Wdr90	chr17	protein_coding	WD repeat domain 90
chr17	26079516	26079629	-	26079516	26079683	A5SS	0.5	50	50	ENSMUST00000177170.8	ENSMUSG00000073434.13	Wdr90	chr17	protein_coding	WD repeat domain 90
chr17	26083695	26087388	-	26083695	26086608	5pMXE	0.33	50	50	ENSMUST00000237876.2	ENSMUSG00000025732.7	Mcrip2	chr17	protein_coding	MAPK regulated corepressor interacting protein 2
chr17	26082939	26083225	-	26083013	26083225	A3SS	0.33	50	50	ENSMUST00000237876.2	ENSMUSG00000025732.7	Mcrip2	chr17	protein_coding	MAPK regulated corepressor interacting protein 2
chr17	26082942	26083225	-	26083013	26083225	A3SS	0.33	50	50	ENSMUST00000237876.2	ENSMUSG00000025732.7	Mcrip2	chr17	protein_coding	MAPK regulated corepressor interacting protein 2
chr17	26083013	26083177	-	26083013	26083225	A5SS	0.5	50	50	ENSMUST00000237876.2	ENSMUSG00000025732.7	Mcrip2	chr17	protein_coding	MAPK regulated corepressor interacting protein 2
chr17	26083695	26084509	-	26083695	26086608	A5SS	0.33	50	50	ENSMUST00000237876.2	ENSMUSG00000025732.7	Mcrip2	chr17	protein_coding	MAPK regulated corepressor interacting protein 2
chr17	26083695;26084641	26084509;26087388	-	26083695	26087388	cassetteExon	0.5	100	100	ENSMUST00000235806.2	ENSMUSG00000025732.7	Mcrip2	chr17	protein_coding	MAPK regulated corepressor interacting protein 2
chr17	26082942	26083225	-	26082939	26083225	A3SS	0.33	50	50	ENSMUST00000235806.2	ENSMUSG00000025732.7	Mcrip2	chr17	protein_coding	MAPK regulated corepressor interacting protein 2
chr17	26094700	26095194	+	26094700;26095096	26094934;26095194	ES	0.5	50	50	ENSMUST00000026827.16	ENSMUSG00000025731.17	Mettl26	chr17	protein_coding	methyltransferase like 26
chr17	26094700	26095635	+	26094700	26095194	A3SS	0.33	50	50	ENSMUST00000236426.2	ENSMUSG00000025731.17	Mettl26	chr17	protein_coding	methyltransferase like 26
chr17	26094700;26095536	26095194;26095635	+	26094700	26095635	cassetteExon	0.5	100	100	ENSMUST00000169085.8	ENSMUSG00000025731.17	Mettl26	chr17	protein_coding	methyltransferase like 26
chr17	26094700	26094934	+	26094700	26095635	A3SS	0.33	50	50	ENSMUST00000169085.8	ENSMUSG00000025731.17	Mettl26	chr17	protein_coding	methyltransferase like 26
chr17	26104126	26109612	-	26104126;26109485	26109175;26109612	ES	0.5	50	50	ENSMUST00000166146.8	ENSMUSG00000025730.15	Rab40c	chr17	protein_coding	Rab40C, member RAS oncogene family
chr17	26110320	26138339	-	26110320;26136671	26136493;26138339	ES	0.5	50	50	ENSMUST00000166146.8	ENSMUSG00000025730.15	Rab40c	chr17	protein_coding	Rab40C, member RAS oncogene family
chr17	26103719	26104049	-	26103776	26104049	A3SS	0.5	50	50	ENSMUST00000166146.8	ENSMUSG00000025730.15	Rab40c	chr17	protein_coding	Rab40C, member RAS oncogene family
chr17	26110320	26132584	-	26110320	26136493	A5SS	0.33	50	50	ENSMUST00000166146.8	ENSMUSG00000025730.15	Rab40c	chr17	protein_coding	Rab40C, member RAS oncogene family
chr17	26138523	26138626	-	26138523	26138564	5pMXE	0.5	50	50	ENSMUST00000179998.8	ENSMUSG00000025730.15	Rab40c	chr17	protein_coding	Rab40C, member RAS oncogene family
chr17	26110320	26132584	-	26110320	26138339	A5SS	0.33	50	50	ENSMUST00000179998.8	ENSMUSG00000025730.15	Rab40c	chr17	protein_coding	Rab40C, member RAS oncogene family
chr17	26138432	26138626	-	26138523	26138626	A3SS	0.33	50	50	ENSMUST00000026826.14	ENSMUSG00000025730.15	Rab40c	chr17	protein_coding	Rab40C, member RAS oncogene family
chr17	26138536	26138626	-	26138523	26138626	A3SS	0.33	50	50	ENSMUST00000026826.14	ENSMUSG00000025730.15	Rab40c	chr17	protein_coding	Rab40C, member RAS oncogene family
chr17	26138536	26138626	-	26138432	26138626	A3SS	0.33	50	50	ENSMUST00000172168.2	ENSMUSG00000025730.15	Rab40c	chr17	protein_coding	Rab40C, member RAS oncogene family
chr17	26147826	26149932	-	26147826;26149609	26149495;26149932	ES	0.5	50	50	ENSMUST00000133650.9	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26149609	26150436	-	26149609;26150012	26149932;26150436	ES	0.5	50	50	ENSMUST00000133650.9	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26150801	26153732	-	26150801;26151205	26151079;26153732	ES	0.16	50	50	ENSMUST00000133650.9	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26151205;26153247	26153068;26153732	-	26151205	26153732	cassetteExon	0.5	100	100	ENSMUST00000133650.9	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26146730	26147765	-	26145489	26147765	A3SS	0.5	50	50	ENSMUST00000133650.9	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26146730	26149495	-	26147826	26149495	A3SS&ES	0.5	50	50	ENSMUST00000133650.9	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26154075	26155738	-	26154108	26155738	A3SS	0.5	50	50	ENSMUST00000133650.9	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26154108	26155007	-	26154108	26155738	A5SS	0.5	50	50	ENSMUST00000133650.9	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26146730	26149495	-	26146730;26147826	26147765;26149495	ES	0.5	50	50	ENSMUST00000026823.16	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26156436	26161241	-	26156436	26160789	5pMXE	0.14	50	50	ENSMUST00000026823.16	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26156436	26161744	-	26156436	26160789	5pMXE	0.14	50	50	ENSMUST00000026823.16	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26156436	26161768	-	26156436	26160789	5pMXE	0.14	50	50	ENSMUST00000026823.16	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26156436	26163438	-	26156436	26160789	5pMXE	0.14	50	50	ENSMUST00000026823.16	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26156436	26163851	-	26156436	26160789	5pMXE	0.14	50	50	ENSMUST00000026823.16	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26156436;26159868	26159797;26160789	-	26156436	26160789	cassetteExon	0.5	100	100	ENSMUST00000026823.16	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26156436	26163438	-	26156436	26161744	5pMXE	0.14	50	50	ENSMUST00000208043.2	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26156436	26163851	-	26156436	26161744	5pMXE	0.14	50	50	ENSMUST00000208043.2	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26156436	26159797	-	26156436	26161744	A5SS	0.14	50	50	ENSMUST00000208043.2	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26156436	26161241	-	26156436	26161744	A5SS	0.14	50	50	ENSMUST00000208043.2	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26156436	26161768	-	26156436	26161744	A5SS	0.14	50	50	ENSMUST00000208043.2	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26146730;26147826	26147765;26149932	-	26146730;26149609	26149495;26149932	MXE	0.5	100	100	ENSMUST00000237570.2	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26156436;26163566	26163438;26163851	-	26156436	26163851	cassetteExon	0.5	100	100	ENSMUST00000237570.2	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26163292	26163851	-	26156436	26163851	A3SS	0.33	50	50	ENSMUST00000237570.2	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26156436	26159797	-	26156436	26163851	A5SS	0.14	50	50	ENSMUST00000237570.2	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26156436	26161241	-	26156436	26163851	A5SS	0.14	50	50	ENSMUST00000237570.2	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26156436	26161768	-	26156436	26163851	A5SS	0.14	50	50	ENSMUST00000237570.2	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26150801	26153732	-	26151205	26153732	A3SS	0.16	50	50	ENSMUST00000148045.8	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26149609	26153732	-	26149609	26150436	5pMXE	0.33	50	50	ENSMUST00000207073.2	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26147826;26150012	26149932;26150436	-	26147826;26149609	26149495;26150436	MXE	0.5	100	100	ENSMUST00000207073.2	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26150012	26153732	-	26150012;26150647	26150436;26153732	ES	0.16	50	50	ENSMUST00000123929.9	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26150801	26153732	-	26150647	26153732	A3SS	0.16	50	50	ENSMUST00000123929.9	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26151205	26153732	-	26150647	26153732	A3SS	0.16	50	50	ENSMUST00000123929.9	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26153247	26153732	-	26150647	26153732	A3SS	0.16	50	50	ENSMUST00000123929.9	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26146730;26149609	26149495;26150436	-	26146730;26150012	26147765;26150436	MXE	0.5	100	100	ENSMUST00000207496.2	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26147826;26150012	26149932;26153732	-	26147826;26149609	26149495;26153732	MXE	0.5	100	100	ENSMUST00000207777.2	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26149609;26150012	26149932;26153732	-	26149609	26153732	cassetteExon	0.5	100	100	ENSMUST00000207777.2	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26149609;26150647	26150436;26153732	-	26149609	26153732	cassetteExon	0.5	100	100	ENSMUST00000207777.2	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26149609;26150801	26150436;26153732	-	26149609	26153732	cassetteExon	0.5	100	100	ENSMUST00000207777.2	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26151205	26153732	-	26149609	26153732	A3SS	0.16	50	50	ENSMUST00000207777.2	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26153247	26153732	-	26149609	26153732	A3SS	0.16	50	50	ENSMUST00000207777.2	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26149609	26153732	-	26149609	26149932	5pMXE	0.33	50	50	ENSMUST00000139078.3	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26149609	26150436	-	26149609	26149932	A5SS	0.33	50	50	ENSMUST00000139078.3	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26149609;26150647	26150436;26153732	-	26149609;26150012	26149932;26153732	MXE	0.5	100	100	ENSMUST00000135253.3	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26149609;26150801	26150436;26153732	-	26149609;26150012	26149932;26153732	MXE	0.5	100	100	ENSMUST00000135253.3	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26150012;26150801	26150436;26153732	-	26150012	26153732	cassetteExon	0.5	100	100	ENSMUST00000135253.3	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26151205	26153732	-	26150012	26153732	A3SS	0.16	50	50	ENSMUST00000135253.3	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26153247	26153732	-	26150012	26153732	A3SS	0.16	50	50	ENSMUST00000135253.3	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26147826	26149932	-	26149609	26149932	3pMXE	0.5	50	50	ENSMUST00000156924.2	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26153247	26153732	-	26150801	26153732	A3SS	0.25	50	50	ENSMUST00000208242.2	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26156436	26163438	-	26156436	26161768	5pMXE	0.14	50	50	ENSMUST00000145745.3	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26156436;26161370	26161241;26161768	-	26156436	26161768	cassetteExon	0.5	100	100	ENSMUST00000145745.3	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26156436	26159797	-	26156436	26161768	A5SS	0.14	50	50	ENSMUST00000145745.3	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26156436	26163851	-	26156436	26163438	5pMXE	0.14	50	50	ENSMUST00000148307.2	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26163292	26163438	-	26156436	26163438	A3SS	0.5	50	50	ENSMUST00000148307.2	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26156436	26159797	-	26156436	26163438	A5SS	0.14	50	50	ENSMUST00000148307.2	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26156436	26161241	-	26156436	26163438	A5SS	0.14	50	50	ENSMUST00000148307.2	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26156436	26159797	-	26156436	26161241	A5SS	0.2	50	50	ENSMUST00000148382.2	ENSMUSG00000025728.17	Pigq	chr17	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class Q
chr17	26163292;26163566	26163438;26163851	-	26163292	26163851	cassetteExon	0.5	100	100	ENSMUST00000085027.4	ENSMUSG00000090113.8	Nhlrc4	chr17	protein_coding	NHL repeat containing 4
chr17	26163566	26163788	-	26163566	26163851	A5SS	0.5	50	50	ENSMUST00000159540.8	ENSMUSG00000090113.8	Nhlrc4	chr17	protein_coding	NHL repeat containing 4
chr17	26182119	26183001	-	26182119;26182429	26182221;26183001	ES	0.5	50	50	ENSMUST00000212735.2	ENSMUSG00000037326.11	Capn15	chr17	protein_coding	calpain 15
chr17	26184501;26192353	26192065;26204445	-	26184501	26204445	cassetteExon	0.5	100	100	ENSMUST00000212735.2	ENSMUSG00000037326.11	Capn15	chr17	protein_coding	calpain 15
chr17	26177998	26178781	-	26178707	26178781	A3SS	0.33	50	50	ENSMUST00000212735.2	ENSMUSG00000037326.11	Capn15	chr17	protein_coding	calpain 15
chr17	26178703	26178781	-	26178707	26178781	A3SS	0.33	50	50	ENSMUST00000212735.2	ENSMUSG00000037326.11	Capn15	chr17	protein_coding	calpain 15
chr17	26184501	26198812	-	26184501	26204445	A5SS	0.33	50	50	ENSMUST00000212735.2	ENSMUSG00000037326.11	Capn15	chr17	protein_coding	calpain 15
chr17	26178959	26179311	-	26178959;26179205	26179039;26179311	ES	0.5	50	50	ENSMUST00000212149.2	ENSMUSG00000037326.11	Capn15	chr17	protein_coding	calpain 15
chr17	26184501	26192065	-	26184501	26198812	A5SS	0.33	50	50	ENSMUST00000212149.2	ENSMUSG00000037326.11	Capn15	chr17	protein_coding	calpain 15
chr17	26177998	26178781	-	26178703	26178781	A3SS	0.33	50	50	ENSMUST00000212789.2	ENSMUSG00000037326.11	Capn15	chr17	protein_coding	calpain 15
chr17	26178959	26179311	-	26178959	26179039	A5SS	0.5	50	50	ENSMUST00000212520.2	ENSMUSG00000037326.11	Capn15	chr17	protein_coding	calpain 15
chr17	26184501	26204445	-	26179785	26204445	A3SS	0.33	50	50	ENSMUST00000211917.2	ENSMUSG00000037326.11	Capn15	chr17	protein_coding	calpain 15
chr17	26192353	26204445	-	26179785	26204445	A3SS	0.33	50	50	ENSMUST00000211917.2	ENSMUSG00000037326.11	Capn15	chr17	protein_coding	calpain 15
chr17	26179785	26180694	-	26179785	26204445	A5SS	0.5	50	50	ENSMUST00000211917.2	ENSMUSG00000037326.11	Capn15	chr17	protein_coding	calpain 15
chr17	26182119	26183001	-	26182119	26182221	5pMXE	0.5	50	50	ENSMUST00000212702.2	ENSMUSG00000037326.11	Capn15	chr17	protein_coding	calpain 15
chr17	26205010	26209400	+	26205010	26206957	3pMXE	0.5	50	50	ENSMUST00000180932.3	ENSMUSG00000097523.3	1700022N22Rik	chr17	lncRNA	RIKEN cDNA 1700022N22 gene
chr17	26205245	26206957	+	26205010	26206957	A5SS	0.5	50	50	ENSMUST00000180932.3	ENSMUSG00000097523.3	1700022N22Rik	chr17	lncRNA	RIKEN cDNA 1700022N22 gene
chr17	26235129	26243349	-	26235129	26240662	5pMXE	0.33	50	50	ENSMUST00000118828.8	ENSMUSG00000037098.19	Rab11fip3	chr17	protein_coding	RAB11 family interacting protein 3 (class II)
chr17	26227864;26231105	26230971;26232748	-	26227864	26232748	cassetteExon	0.5	100	100	ENSMUST00000118828.8	ENSMUSG00000037098.19	Rab11fip3	chr17	protein_coding	RAB11 family interacting protein 3 (class II)
chr17	26235129	26237194	-	26235129	26240662	A5SS	0.33	50	50	ENSMUST00000118828.8	ENSMUSG00000037098.19	Rab11fip3	chr17	protein_coding	RAB11 family interacting protein 3 (class II)
chr17	26255472	26255563	-	26243440	26255563	A3SS	0.5	50	50	ENSMUST00000122103.9	ENSMUSG00000037098.19	Rab11fip3	chr17	protein_coding	RAB11 family interacting protein 3 (class II)
chr17	26235129	26237194	-	26235129	26243349	A5SS	0.33	50	50	ENSMUST00000122103.9	ENSMUSG00000037098.19	Rab11fip3	chr17	protein_coding	RAB11 family interacting protein 3 (class II)
chr17	26302067	26302819	-	26302067;26302654	26302550;26302819	ES	0.5	50	50	ENSMUST00000235318.2	ENSMUSG00000036775.14	Decr2	chr17	protein_coding	2-4-dienoyl-Coenzyme A reductase 2, peroxisomal
chr17	26307047	26307903	-	26307047	26307568	5pMXE	0.5	50	50	ENSMUST00000235318.2	ENSMUSG00000036775.14	Decr2	chr17	protein_coding	2-4-dienoyl-Coenzyme A reductase 2, peroxisomal
chr17	26301944	26302550	-	26302067	26302550	A3SS	0.5	50	50	ENSMUST00000235318.2	ENSMUSG00000036775.14	Decr2	chr17	protein_coding	2-4-dienoyl-Coenzyme A reductase 2, peroxisomal
chr17	26301235	26301945	-	26301235	26301850	A5SS	0.5	50	50	ENSMUST00000235318.2	ENSMUSG00000036775.14	Decr2	chr17	protein_coding	2-4-dienoyl-Coenzyme A reductase 2, peroxisomal
chr17	26306433;26307047	26306996;26307903	-	26306433	26307903	cassetteExon	0.5	100	100	ENSMUST00000137672.3	ENSMUSG00000036775.14	Decr2	chr17	protein_coding	2-4-dienoyl-Coenzyme A reductase 2, peroxisomal
chr17	26307971	26309071	-	26307971	26308938	A5SS	0.5	50	50	ENSMUST00000137672.3	ENSMUSG00000036775.14	Decr2	chr17	protein_coding	2-4-dienoyl-Coenzyme A reductase 2, peroxisomal
chr17	26302067	26302819	-	26302654	26302819	A3SS&ES	0.5	50	50	ENSMUST00000123056.2	ENSMUSG00000036775.14	Decr2	chr17	protein_coding	2-4-dienoyl-Coenzyme A reductase 2, peroxisomal
chr17	26311126;26311531	26311481;26312591	-	26311126	26312591	cassetteExon	0.5	100	100	ENSMUST00000236967.2	ENSMUSG00000024177.10	Nme4	chr17	protein_coding	NME/NM23 nucleoside diphosphate kinase 4
chr17	26312703	26313111	-	26312934	26313111	A3SS	0.5	50	50	ENSMUST00000236967.2	ENSMUSG00000024177.10	Nme4	chr17	protein_coding	NME/NM23 nucleoside diphosphate kinase 4
chr17	26312703	26313111	-	26312703;26312934	26312833;26313111	ES	0.5	50	50	ENSMUST00000025007.7	ENSMUSG00000024177.10	Nme4	chr17	protein_coding	NME/NM23 nucleoside diphosphate kinase 4
chr17	26339436;26339659	26339513;26340514	+	26339436	26340514	cassetteExon	0.5	100	100	ENSMUST00000235821.2	ENSMUSG00000024180.15	Pgap6	chr17	protein_coding	post-glycosylphosphatidylinositol attachment to proteins 6
chr17	26340630	26341061	+	26340630	26340912	A3SS	0.5	50	50	ENSMUST00000235821.2	ENSMUSG00000024180.15	Pgap6	chr17	protein_coding	post-glycosylphosphatidylinositol attachment to proteins 6
chr17	26339436	26340514	+	26339659	26340514	A5SS	0.5	50	50	ENSMUST00000236993.2	ENSMUSG00000024180.15	Pgap6	chr17	protein_coding	post-glycosylphosphatidylinositol attachment to proteins 6
chr17	26344365	26344474	+	26344365	26344452	A3SS	0.5	50	50	ENSMUST00000025014.10	ENSMUSG00000024181.10	Mrpl28	chr17	protein_coding	mitochondrial ribosomal protein L28
chr17	26344538	26345266	+	26344538	26345245	A3SS	0.5	50	50	ENSMUST00000025014.10	ENSMUSG00000024181.10	Mrpl28	chr17	protein_coding	mitochondrial ribosomal protein L28
chr17	26362550	26401464	+	26362550;26392754	26392614;26401464	ES	0.5	50	50	ENSMUST00000074370.10	ENSMUSG00000024182.17	Axin1	chr17	protein_coding	axin 1
chr17	26409205	26412913	+	26409205;26411597	26411490;26412913	ES	0.5	50	50	ENSMUST00000074370.10	ENSMUSG00000024182.17	Axin1	chr17	protein_coding	axin 1
chr17	26415758	26415866	-	26415776	26415866	A3SS	0.5	50	50	ENSMUST00000039113.14	ENSMUSG00000024184.16	Pdia2	chr17	protein_coding	protein disulfide isomerase associated 2
chr17	26416683	26416806	-	26416728	26416806	A3SS	0.33	50	50	ENSMUST00000039113.14	ENSMUSG00000024184.16	Pdia2	chr17	protein_coding	protein disulfide isomerase associated 2
chr17	26416719	26416806	-	26416728	26416806	A3SS	0.33	50	50	ENSMUST00000039113.14	ENSMUSG00000024184.16	Pdia2	chr17	protein_coding	protein disulfide isomerase associated 2
chr17	26416683	26416806	-	26416719	26416806	A3SS	0.33	50	50	ENSMUST00000120333.8	ENSMUSG00000024184.16	Pdia2	chr17	protein_coding	protein disulfide isomerase associated 2
chr17	26419344	26426524	-	26419344	26420045	5pMXE	0.5	50	50	ENSMUST00000025019.9	ENSMUSG00000073433.12	Arhgdig	chr17	protein_coding	Rho GDP dissociation inhibitor (GDI) gamma
chr17	26418650	26418744	-	26418650	26418726	A5SS	0.5	50	50	ENSMUST00000025019.9	ENSMUSG00000073433.12	Arhgdig	chr17	protein_coding	Rho GDP dissociation inhibitor (GDI) gamma
chr17	26422015	26422270	+	26422015	26422188	A3SS	0.33	50	50	ENSMUST00000152676.8	ENSMUSG00000024186.16	Rgs11	chr17	protein_coding	regulator of G-protein signaling 11
chr17	26422015	26422436	+	26422015	26422188	A3SS&ES	0.33	50	50	ENSMUST00000152676.8	ENSMUSG00000024186.16	Rgs11	chr17	protein_coding	regulator of G-protein signaling 11
chr17	26422366	26422436	+	26422366	26422440	A3SS	0.5	50	50	ENSMUST00000152676.8	ENSMUSG00000024186.16	Rgs11	chr17	protein_coding	regulator of G-protein signaling 11
chr17	26424749	26426267	+	26424749	26426273	A3SS	0.5	50	50	ENSMUST00000152676.8	ENSMUSG00000024186.16	Rgs11	chr17	protein_coding	regulator of G-protein signaling 11
chr17	26422015	26422436	+	26422015;26422366	26422270;26422436	ES	0.5	50	50	ENSMUST00000122058.8	ENSMUSG00000024186.16	Rgs11	chr17	protein_coding	regulator of G-protein signaling 11
chr17	26422015;26422366	26422188;26422436	+	26422015	26422436	cassetteExon	0.5	100	100	ENSMUST00000126464.8	ENSMUSG00000024186.16	Rgs11	chr17	protein_coding	regulator of G-protein signaling 11
chr17	26422015	26422436	+	26422015	26422270	A3SS	0.33	50	50	ENSMUST00000152299.2	ENSMUSG00000024186.16	Rgs11	chr17	protein_coding	regulator of G-protein signaling 11
chr17	26437292	26439255	-	26437292;26437725	26437609;26439255	ES	0.5	50	50	ENSMUST00000114988.8	ENSMUSG00000024187.16	Fam234a	chr17	protein_coding	family with sequence similarity 234, member A
chr17	26439554	26462980	-	26439554;26444997	26444886;26462980	ES	0.5	50	50	ENSMUST00000114988.8	ENSMUSG00000024187.16	Fam234a	chr17	protein_coding	family with sequence similarity 234, member A
chr17	26432880	26433320	-	26432880	26433302	A5SS	0.5	50	50	ENSMUST00000114988.8	ENSMUSG00000024187.16	Fam234a	chr17	protein_coding	family with sequence similarity 234, member A
chr17	26439554	26444902	-	26439554	26444886	A5SS	0.25	50	50	ENSMUST00000114988.8	ENSMUSG00000024187.16	Fam234a	chr17	protein_coding	family with sequence similarity 234, member A
chr17	26439554	26462964	-	26439554	26444886	A5SS&ES	0.25	50	50	ENSMUST00000114988.8	ENSMUSG00000024187.16	Fam234a	chr17	protein_coding	family with sequence similarity 234, member A
chr17	26444997	26462964	-	26444997	26462980	A5SS	0.5	50	50	ENSMUST00000114988.8	ENSMUSG00000024187.16	Fam234a	chr17	protein_coding	family with sequence similarity 234, member A
chr17	26439554	26462980	-	26439554;26444997	26444902;26462980	ES	0.5	50	50	ENSMUST00000234262.2	ENSMUSG00000024187.16	Fam234a	chr17	protein_coding	family with sequence similarity 234, member A
chr17	26439554	26462964	-	26439554	26444902	A5SS&ES	0.25	50	50	ENSMUST00000234262.2	ENSMUSG00000024187.16	Fam234a	chr17	protein_coding	family with sequence similarity 234, member A
chr17	26439554	26462964	-	26439554;26444997	26444886;26462964	ES	0.5	50	50	ENSMUST00000234687.2	ENSMUSG00000024187.16	Fam234a	chr17	protein_coding	family with sequence similarity 234, member A
chr17	26439554	26462980	-	26439554	26444886	A5SS&ES	0.25	50	50	ENSMUST00000234687.2	ENSMUSG00000024187.16	Fam234a	chr17	protein_coding	family with sequence similarity 234, member A
chr17	26439554	26462964	-	26439554	26462980	A5SS	0.25	50	50	ENSMUST00000141240.3	ENSMUSG00000024187.16	Fam234a	chr17	protein_coding	family with sequence similarity 234, member A
chr17	26439554;26444997	26444902;26462964	-	26439554	26462964	cassetteExon	0.5	100	100	ENSMUST00000234175.2	ENSMUSG00000024187.16	Fam234a	chr17	protein_coding	family with sequence similarity 234, member A
chr17	26486332	26496520	+	26486332;26494824	26494648;26496520	ES	0.5	50	50	ENSMUST00000025023.15	ENSMUSG00000024188.17	Luc7l	chr17	protein_coding	Luc7-like
chr17	26472065;26473018	26472948;26474005	+	26472065	26474005	cassetteExon	0.5	100	100	ENSMUST00000025023.15	ENSMUSG00000024188.17	Luc7l	chr17	protein_coding	Luc7-like
chr17	26472065;26473362	26472948;26474005	+	26472065	26474005	cassetteExon	0.5	100	100	ENSMUST00000025023.15	ENSMUSG00000024188.17	Luc7l	chr17	protein_coding	Luc7-like
chr17	26472653	26474005	+	26472065	26474005	A5SS	0.25	50	50	ENSMUST00000025023.15	ENSMUSG00000024188.17	Luc7l	chr17	protein_coding	Luc7-like
chr17	26499138	26500599	+	26499102	26500599	A5SS	0.5	50	50	ENSMUST00000114976.9	ENSMUSG00000024188.17	Luc7l	chr17	protein_coding	Luc7-like
chr17	26472065	26472948	+	26472065	26485257	A3SS	0.33	50	50	ENSMUST00000140427.8	ENSMUSG00000024188.17	Luc7l	chr17	protein_coding	Luc7-like
chr17	26472065	26474005	+	26472065	26485257	A3SS	0.33	50	50	ENSMUST00000140427.8	ENSMUSG00000024188.17	Luc7l	chr17	protein_coding	Luc7-like
chr17	26476998	26485257	+	26472065	26485257	A5SS	0.5	50	50	ENSMUST00000140427.8	ENSMUSG00000024188.17	Luc7l	chr17	protein_coding	Luc7-like
chr17	26472065	26474005	+	26473362	26474005	A5SS	0.25	50	50	ENSMUST00000154235.8	ENSMUSG00000024188.17	Luc7l	chr17	protein_coding	Luc7-like
chr17	26472653	26474005	+	26473362	26474005	A5SS	0.25	50	50	ENSMUST00000154235.8	ENSMUSG00000024188.17	Luc7l	chr17	protein_coding	Luc7-like
chr17	26473018	26474005	+	26473362	26474005	A5SS	0.25	50	50	ENSMUST00000154235.8	ENSMUSG00000024188.17	Luc7l	chr17	protein_coding	Luc7-like
chr17	26472065	26474005	+	26472065	26472948	A3SS	0.33	50	50	ENSMUST00000133032.8	ENSMUSG00000024188.17	Luc7l	chr17	protein_coding	Luc7-like
chr17	26472653	26474005	+	26473018	26474005	A5SS&ES	0.25	50	50	ENSMUST00000148894.2	ENSMUSG00000024188.17	Luc7l	chr17	protein_coding	Luc7-like
chr17	26633969	26650761	+	26633969	26657641	A3SS	0.5	50	50	ENSMUST00000182897.8	ENSMUSG00000034413.15	Neurl1b	chr17	protein_coding	neuralized E3 ubiquitin protein ligase 1B
chr17	26651306	26657641	+	26633969	26657641	A5SS	0.5	50	50	ENSMUST00000182897.8	ENSMUSG00000034413.15	Neurl1b	chr17	protein_coding	neuralized E3 ubiquitin protein ligase 1B
chr17	26651306	26660052	+	26658333	26660052	A5SS&ES	0.5	50	50	ENSMUST00000182897.8	ENSMUSG00000034413.15	Neurl1b	chr17	protein_coding	neuralized E3 ubiquitin protein ligase 1B
chr17	26651306	26657641	+	26651306	26660052	A3SS	0.5	50	50	ENSMUST00000183077.8	ENSMUSG00000034413.15	Neurl1b	chr17	protein_coding	neuralized E3 ubiquitin protein ligase 1B
chr17	26633969	26657641	+	26633969;26651306	26650761;26657641	ES	0.5	50	50	ENSMUST00000053020.8	ENSMUSG00000034413.15	Neurl1b	chr17	protein_coding	neuralized E3 ubiquitin protein ligase 1B
chr17	26651306	26660052	+	26651306;26658333	26657641;26660052	ES	0.5	50	50	ENSMUST00000053020.8	ENSMUSG00000034413.15	Neurl1b	chr17	protein_coding	neuralized E3 ubiquitin protein ligase 1B
chr17	26690323	26709455	-	26690323	26720608	A5SS	0.33	50	50	ENSMUST00000236778.2	ENSMUSG00000118107.2	Gm34455	chr17	lncRNA	predicted gene, 34455
chr17	26690323	26721914	-	26690323	26720608	A5SS	0.33	50	50	ENSMUST00000236778.2	ENSMUSG00000118107.2	Gm34455	chr17	lncRNA	predicted gene, 34455
chr17	26690323	26709455	-	26690323	26721914	A5SS	0.33	50	50	ENSMUST00000235705.2	ENSMUSG00000118107.2	Gm34455	chr17	lncRNA	predicted gene, 34455
chr17	26726693	26771010	-	26726693	26726931	5pMXE	0.33	50	50	ENSMUST00000025025.7	ENSMUSG00000024190.8	Dusp1	chr17	protein_coding	dual specificity phosphatase 1
chr17	26726693	26727286	-	26726693	26726931	A5SS	0.33	50	50	ENSMUST00000025025.7	ENSMUSG00000024190.8	Dusp1	chr17	protein_coding	dual specificity phosphatase 1
chr17	26726693	26771010	-	26726693	26727286	5pMXE	0.33	50	50	ENSMUST00000236661.2	ENSMUSG00000024190.8	Dusp1	chr17	protein_coding	dual specificity phosphatase 1
chr17	26773440	26780266	-	26773440	26781064	A5SS	0.5	50	50	ENSMUST00000235532.2	ENSMUSG00000024190.8	Dusp1	chr17	protein_coding	dual specificity phosphatase 1
chr17	26780606;26824558	26824438;26827567	+	26780606	26827567	cassetteExon	0.5	100	100	ENSMUST00000167662.8	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26848653;26849053	26848875;26853391	+	26848653	26853391	cassetteExon	0.5	100	100	ENSMUST00000167662.8	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26860678;26873834	26873801;26874041	+	26860678	26874041	cassetteExon	0.5	100	100	ENSMUST00000167662.8	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26860678;26873927	26873801;26874041	+	26860678	26874041	cassetteExon	0.5	100	100	ENSMUST00000167662.8	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26780606	26787639	+	26780606	26827567	A3SS	0.33	50	50	ENSMUST00000167662.8	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26860678	26868707	+	26860678	26874041	A3SS	0.25	50	50	ENSMUST00000167662.8	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26860678	26871684	+	26860678	26874041	A3SS	0.25	50	50	ENSMUST00000167662.8	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26813950	26827567	+	26780606	26827567	A5SS	0.14	50	50	ENSMUST00000167662.8	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26820495	26827567	+	26780606	26827567	A5SS	0.14	50	50	ENSMUST00000167662.8	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26821273	26827567	+	26780606	26827567	A5SS	0.14	50	50	ENSMUST00000167662.8	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26826943	26827567	+	26780606	26827567	A5SS	0.14	50	50	ENSMUST00000167662.8	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26827344	26827567	+	26780606	26827567	A5SS	0.14	50	50	ENSMUST00000167662.8	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26840713	26843564	+	26833402	26843564	A5SS	0.5	50	50	ENSMUST00000167662.8	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26849503	26853391	+	26848653	26853391	A5SS	0.25	50	50	ENSMUST00000167662.8	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26851000	26853391	+	26848653	26853391	A5SS	0.25	50	50	ENSMUST00000167662.8	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26780606	26824438	+	26780606	26787639	3pMXE	0.33	50	50	ENSMUST00000165021.2	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26813950	26827567	+	26824558	26827567	A5SS&ES	0.14	50	50	ENSMUST00000001619.16	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26820495	26827567	+	26824558	26827567	A5SS&ES	0.14	50	50	ENSMUST00000001619.16	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26821273	26827567	+	26824558	26827567	A5SS&ES	0.14	50	50	ENSMUST00000001619.16	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26826943	26827567	+	26824558	26827567	A5SS	0.14	50	50	ENSMUST00000001619.16	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26827344	26827567	+	26824558	26827567	A5SS	0.14	50	50	ENSMUST00000001619.16	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26820495	26827567	+	26813950	26827567	A5SS	0.14	50	50	ENSMUST00000235915.2	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26821273	26827567	+	26813950	26827567	A5SS	0.14	50	50	ENSMUST00000235915.2	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26826943	26827567	+	26813950	26827567	A5SS	0.14	50	50	ENSMUST00000235915.2	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26827344	26827567	+	26813950	26827567	A5SS	0.14	50	50	ENSMUST00000235915.2	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26860678	26873801	+	26860678;26871784	26871684;26873801	ES	0.5	50	50	ENSMUST00000235653.2	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26849053;26851000	26850900;26853391	+	26849053	26853391	cassetteExon	0.5	100	100	ENSMUST00000235653.2	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26860678	26868707	+	26860678	26871684	A3SS	0.25	50	50	ENSMUST00000235653.2	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26821273	26827567	+	26820495	26827567	A5SS	0.14	50	50	ENSMUST00000235653.2	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26826943	26827567	+	26820495	26827567	A5SS	0.14	50	50	ENSMUST00000235653.2	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26827344	26827567	+	26820495	26827567	A5SS	0.14	50	50	ENSMUST00000235653.2	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26849503	26853391	+	26849053	26853391	A5SS	0.25	50	50	ENSMUST00000235653.2	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26873834	26874041	+	26873927	26874041	A5SS	0.33	50	50	ENSMUST00000235653.2	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26860678	26868707	+	26860678	26873801	A3SS	0.25	50	50	ENSMUST00000167070.3	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26826943	26827567	+	26821273	26827567	A5SS	0.14	50	50	ENSMUST00000237902.2	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26827344	26827567	+	26821273	26827567	A5SS	0.14	50	50	ENSMUST00000237902.2	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26849503	26853391	+	26851000	26853391	A5SS&ES	0.25	50	50	ENSMUST00000237902.2	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26848653	26853391	+	26848653;26849503	26848875;26853391	ES	0.25	50	50	ENSMUST00000235197.2	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26826943;26827344	26827271;26827567	+	26826943	26827567	cassetteExon	0.5	100	100	ENSMUST00000235197.2	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26827090	26827271	+	26826943	26827271	A5SS	0.5	50	50	ENSMUST00000236642.2	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26826943	26827567	+	26827344	26827567	A5SS&ES	0.5	50	50	ENSMUST00000170640.3	ENSMUSG00000001576.16	Ergic1	chr17	protein_coding	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr17	26901699;26913555	26913453;26914329	+	26901699	26914329	cassetteExon	0.5	100	100	ENSMUST00000236346.2	ENSMUSG00000015575.16	Atp6v0e	chr17	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit E
chr17	26895288	26901652	+	26882365	26901652	A5SS	0.33	50	50	ENSMUST00000236346.2	ENSMUSG00000015575.16	Atp6v0e	chr17	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit E
chr17	26895552	26901652	+	26882365	26901652	A5SS	0.33	50	50	ENSMUST00000236346.2	ENSMUSG00000015575.16	Atp6v0e	chr17	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit E
chr17	26895552	26901652	+	26895288	26901652	A5SS	0.33	50	50	ENSMUST00000236867.2	ENSMUSG00000015575.16	Atp6v0e	chr17	protein_coding	ATPase, H+ transporting, lysosomal V0 subunit E
chr17	26934748	26958517	+	26934748;26955957	26955763;26958517	ES	0.5	50	50	ENSMUST00000062519.14	ENSMUSG00000048249.15	Crebrf	chr17	protein_coding	CREB3 regulatory factor
chr17	26934748	26955790	+	26934748	26955763	A3SS	0.25	50	50	ENSMUST00000062519.14	ENSMUSG00000048249.15	Crebrf	chr17	protein_coding	CREB3 regulatory factor
chr17	26934748	26958517	+	26934748;26955957	26955790;26958517	ES	0.5	50	50	ENSMUST00000144221.2	ENSMUSG00000048249.15	Crebrf	chr17	protein_coding	CREB3 regulatory factor
chr17	26934748	26955763	+	26934748	26976779	A3SS	0.25	50	50	ENSMUST00000151681.2	ENSMUSG00000048249.15	Crebrf	chr17	protein_coding	CREB3 regulatory factor
chr17	26934748	26955790	+	26934748	26976779	A3SS	0.25	50	50	ENSMUST00000151681.2	ENSMUSG00000048249.15	Crebrf	chr17	protein_coding	CREB3 regulatory factor
chr17	26934748	26958517	+	26934748	26976779	A3SS	0.25	50	50	ENSMUST00000151681.2	ENSMUSG00000048249.15	Crebrf	chr17	protein_coding	CREB3 regulatory factor
chr17	26962105	26976779	+	26934748	26976779	A5SS	0.5	50	50	ENSMUST00000151681.2	ENSMUSG00000048249.15	Crebrf	chr17	protein_coding	CREB3 regulatory factor
chr17	27002511	27008669	+	27002511;27005762	27005671;27008669	ES	0.5	50	50	ENSMUST00000015725.16	ENSMUSG00000024191.16	Bnip1	chr17	protein_coding	BCL2/adenovirus E1B interacting protein 1
chr17	27005762	27009900	+	27005762;27008770	27008669;27009900	ES	0.33	50	50	ENSMUST00000015725.16	ENSMUSG00000024191.16	Bnip1	chr17	protein_coding	BCL2/adenovirus E1B interacting protein 1
chr17	27000150;27001605	27001552;27002419	+	27000150	27002419	cassetteExon	0.5	100	100	ENSMUST00000015725.16	ENSMUSG00000024191.16	Bnip1	chr17	protein_coding	BCL2/adenovirus E1B interacting protein 1
chr17	27008770;27008938	27008894;27009900	+	27008770	27009900	cassetteExon	0.5	100	100	ENSMUST00000015725.16	ENSMUSG00000024191.16	Bnip1	chr17	protein_coding	BCL2/adenovirus E1B interacting protein 1
chr17	27000150	27002419	+	27000150	27001552	A3SS	0.5	50	50	ENSMUST00000135899.2	ENSMUSG00000024191.16	Bnip1	chr17	protein_coding	BCL2/adenovirus E1B interacting protein 1
chr17	27002511;27008770	27008669;27009900	+	27002511;27005762	27005671;27009900	MXE	0.5	100	100	ENSMUST00000135824.8	ENSMUSG00000024191.16	Bnip1	chr17	protein_coding	BCL2/adenovirus E1B interacting protein 1
chr17	27002511;27008938	27008669;27009900	+	27002511;27005762	27005671;27009900	MXE	0.5	100	100	ENSMUST00000135824.8	ENSMUSG00000024191.16	Bnip1	chr17	protein_coding	BCL2/adenovirus E1B interacting protein 1
chr17	27005762;27008938	27008669;27009900	+	27005762	27009900	cassetteExon	0.5	100	100	ENSMUST00000135824.8	ENSMUSG00000024191.16	Bnip1	chr17	protein_coding	BCL2/adenovirus E1B interacting protein 1
chr17	27002511	27008669	+	27005762	27008669	5pMXE	0.5	50	50	ENSMUST00000147516.2	ENSMUSG00000024191.16	Bnip1	chr17	protein_coding	BCL2/adenovirus E1B interacting protein 1
chr17	27005762	27009900	+	27005762	27008669	3pMXE	0.5	50	50	ENSMUST00000147516.2	ENSMUSG00000024191.16	Bnip1	chr17	protein_coding	BCL2/adenovirus E1B interacting protein 1
chr17	27080565	27104941	-	27080565;27084090	27084048;27104941	ES	0.5	50	50	ENSMUST00000236777.2	ENSMUSG00000078838.4	Gm17382	chr17	lncRNA	predicted gene, 17382
chr17	27104653	27116719	+	27104653;27105479	27104862;27116719	ES	0.5	50	50	ENSMUST00000236945.2	ENSMUSG00000092539.3	Gm20468	chr17	lncRNA	predicted gene 20468
chr17	27104653	27104862	+	27104653	27116719	A3SS	0.5	50	50	ENSMUST00000172664.3	ENSMUSG00000092539.3	Gm20468	chr17	lncRNA	predicted gene 20468
chr17	27105479	27116719	+	27104653	27116719	A5SS	0.5	50	50	ENSMUST00000172664.3	ENSMUSG00000092539.3	Gm20468	chr17	lncRNA	predicted gene 20468
chr17	27140093	27141650	+	27140093;27140834	27140781;27141650	ES	0.5	50	50	ENSMUST00000078961.6	ENSMUSG00000024301.11	Kifc5b	chr17	protein_coding	kinesin family member C5B
chr17	27153342	27153406	+	27153342	27153428	A3SS	0.5	50	50	ENSMUST00000073724.7	ENSMUSG00000024193.9	Phf1	chr17	protein_coding	PHD finger protein 1
chr17	27153700	27154039	+	27153700	27154028	A3SS	0.5	50	50	ENSMUST00000073724.7	ENSMUSG00000024193.9	Phf1	chr17	protein_coding	PHD finger protein 1
chr17	27155365	27155497	+	27155365	27155486	A3SS	0.33	50	50	ENSMUST00000073724.7	ENSMUSG00000024193.9	Phf1	chr17	protein_coding	PHD finger protein 1
chr17	27155839	27156031	+	27155839	27156028	A3SS	0.5	50	50	ENSMUST00000073724.7	ENSMUSG00000024193.9	Phf1	chr17	protein_coding	PHD finger protein 1
chr17	27155365;27155839	27155486;27156028	+	27155365	27156028	cassetteExon	0.5	100	100	ENSMUST00000237750.2	ENSMUSG00000024193.9	Phf1	chr17	protein_coding	PHD finger protein 1
chr17	27155365;27155839	27155497;27156028	+	27155365	27156028	cassetteExon	0.5	100	100	ENSMUST00000237750.2	ENSMUSG00000024193.9	Phf1	chr17	protein_coding	PHD finger protein 1
chr17	27155365	27156028	+	27155839	27156028	A5SS&ES	0.5	50	50	ENSMUST00000237189.2	ENSMUSG00000024193.9	Phf1	chr17	protein_coding	PHD finger protein 1
chr17	27155365	27156028	+	27155365	27155497	A3SS&ES	0.33	50	50	ENSMUST00000236613.2	ENSMUSG00000024193.9	Phf1	chr17	protein_coding	PHD finger protein 1
chr17	27155365	27156028	+	27155365	27155486	A3SS&ES	0.33	50	50	ENSMUST00000237412.2	ENSMUSG00000024193.9	Phf1	chr17	protein_coding	PHD finger protein 1
chr17	27158066	27158425	-	27158066	27158291	5pMXE	0.5	50	50	ENSMUST00000235951.2	ENSMUSG00000024194.17	Cuta	chr17	protein_coding	cutA divalent cation tolerance homolog
chr17	27157065	27157858	-	27157760	27157858	A3SS&ES	0.5	50	50	ENSMUST00000235951.2	ENSMUSG00000024194.17	Cuta	chr17	protein_coding	cutA divalent cation tolerance homolog
chr17	27157150	27157392	-	27154934	27157392	A3SS	0.5	50	50	ENSMUST00000235951.2	ENSMUSG00000024194.17	Cuta	chr17	protein_coding	cutA divalent cation tolerance homolog
chr17	27158169	27158291	-	27158066	27158291	A3SS	0.5	50	50	ENSMUST00000235951.2	ENSMUSG00000024194.17	Cuta	chr17	protein_coding	cutA divalent cation tolerance homolog
chr17	27157441	27157701	-	27157441	27157546	A5SS	0.5	50	50	ENSMUST00000235951.2	ENSMUSG00000024194.17	Cuta	chr17	protein_coding	cutA divalent cation tolerance homolog
chr17	27157441	27157701	-	27157591	27157701	A3SS	0.33	50	50	ENSMUST00000236744.2	ENSMUSG00000024194.17	Cuta	chr17	protein_coding	cutA divalent cation tolerance homolog
chr17	27157623	27157701	-	27157591	27157701	A3SS	0.33	50	50	ENSMUST00000236744.2	ENSMUSG00000024194.17	Cuta	chr17	protein_coding	cutA divalent cation tolerance homolog
chr17	27158066	27158425	-	27158342	27158425	A3SS	0.5	50	50	ENSMUST00000235442.2	ENSMUSG00000024194.17	Cuta	chr17	protein_coding	cutA divalent cation tolerance homolog
chr17	27157441	27157701	-	27157441;27157591	27157546;27157701	ES	0.33	50	50	ENSMUST00000025027.10	ENSMUSG00000024194.17	Cuta	chr17	protein_coding	cutA divalent cation tolerance homolog
chr17	27158066	27158425	-	27158066;27158342	27158291;27158425	ES	0.5	50	50	ENSMUST00000025027.10	ENSMUSG00000024194.17	Cuta	chr17	protein_coding	cutA divalent cation tolerance homolog
chr17	27157441	27157701	-	27157441;27157623	27157546;27157701	ES	0.33	50	50	ENSMUST00000236888.2	ENSMUSG00000024194.17	Cuta	chr17	protein_coding	cutA divalent cation tolerance homolog
chr17	27179495	27180410	+	27179495;27180084	27180043;27180410	ES	0.5	50	50	ENSMUST00000194598.6	ENSMUSG00000067629.14	Syngap1	chr17	protein_coding	synaptic Ras GTPase activating protein 1 homolog (rat)
chr17	27185947;27186734	27186655;27189473	+	27185947	27189473	cassetteExon	0.5	100	100	ENSMUST00000194598.6	ENSMUSG00000067629.14	Syngap1	chr17	protein_coding	synaptic Ras GTPase activating protein 1 homolog (rat)
chr17	27185947;27189324	27189317;27189473	+	27185947	27189473	cassetteExon	0.5	100	100	ENSMUST00000194598.6	ENSMUSG00000067629.14	Syngap1	chr17	protein_coding	synaptic Ras GTPase activating protein 1 homolog (rat)
chr17	27177195	27178376	+	27177195	27178583	A3SS	0.5	50	50	ENSMUST00000194598.6	ENSMUSG00000067629.14	Syngap1	chr17	protein_coding	synaptic Ras GTPase activating protein 1 homolog (rat)
chr17	27182061	27183807	+	27182061	27183801	A3SS	0.5	50	50	ENSMUST00000194598.6	ENSMUSG00000067629.14	Syngap1	chr17	protein_coding	synaptic Ras GTPase activating protein 1 homolog (rat)
chr17	27184012	27185844	+	27184012	27185857	A3SS	0.5	50	50	ENSMUST00000194598.6	ENSMUSG00000067629.14	Syngap1	chr17	protein_coding	synaptic Ras GTPase activating protein 1 homolog (rat)
chr17	27171410	27171536	+	27165712	27171536	A5SS	0.5	50	50	ENSMUST00000194598.6	ENSMUSG00000067629.14	Syngap1	chr17	protein_coding	synaptic Ras GTPase activating protein 1 homolog (rat)
chr17	27185946	27189473	+	27185947	27189473	A5SS	0.2	50	50	ENSMUST00000194598.6	ENSMUSG00000067629.14	Syngap1	chr17	protein_coding	synaptic Ras GTPase activating protein 1 homolog (rat)
chr17	27189167	27189473	+	27185947	27189473	A5SS	0.2	50	50	ENSMUST00000194598.6	ENSMUSG00000067629.14	Syngap1	chr17	protein_coding	synaptic Ras GTPase activating protein 1 homolog (rat)
chr17	27186734	27189473	+	27185946	27189473	A5SS	0.2	50	50	ENSMUST00000229490.2	ENSMUSG00000067629.14	Syngap1	chr17	protein_coding	synaptic Ras GTPase activating protein 1 homolog (rat)
chr17	27189167	27189473	+	27185946	27189473	A5SS	0.2	50	50	ENSMUST00000229490.2	ENSMUSG00000067629.14	Syngap1	chr17	protein_coding	synaptic Ras GTPase activating protein 1 homolog (rat)
chr17	27189324	27189473	+	27185946	27189473	A5SS	0.2	50	50	ENSMUST00000229490.2	ENSMUSG00000067629.14	Syngap1	chr17	protein_coding	synaptic Ras GTPase activating protein 1 homolog (rat)
chr17	27185947;27186734	27186655;27189473	+	27185947;27189324	27189317;27189473	MXE	0.5	100	100	ENSMUST00000177932.7	ENSMUSG00000067629.14	Syngap1	chr17	protein_coding	synaptic Ras GTPase activating protein 1 homolog (rat)
chr17	27189167	27189473	+	27189324	27189473	A5SS&ES	0.2	50	50	ENSMUST00000177932.7	ENSMUSG00000067629.14	Syngap1	chr17	protein_coding	synaptic Ras GTPase activating protein 1 homolog (rat)
chr17	27186734;27189167	27189033;27189473	+	27186734	27189473	cassetteExon	0.5	100	100	ENSMUST00000193200.6	ENSMUSG00000067629.14	Syngap1	chr17	protein_coding	synaptic Ras GTPase activating protein 1 homolog (rat)
chr17	27186734;27189324	27189033;27189473	+	27186734	27189473	cassetteExon	0.5	100	100	ENSMUST00000193200.6	ENSMUSG00000067629.14	Syngap1	chr17	protein_coding	synaptic Ras GTPase activating protein 1 homolog (rat)
chr17	27185947;27189324	27189317;27189473	+	27185947;27189167	27186655;27189473	MXE	0.5	100	100	ENSMUST00000202049.4	ENSMUSG00000067629.14	Syngap1	chr17	protein_coding	synaptic Ras GTPase activating protein 1 homolog (rat)
chr17	27244433	27249650	+	27244433;27248920	27247807;27249650	ES	0.5	50	50	ENSMUST00000133257.9	ENSMUSG00000117819.2	Gm50253	chr17	protein_coding	predicted gene, 50253
chr17	27253878	27255858	+	27253878	27255087	3pMXE	0.5	50	50	ENSMUST00000133257.9	ENSMUSG00000117819.2	Gm50253	chr17	protein_coding	predicted gene, 50253
chr17	27195369	27226166	+	27195369	27244311	A3SS	0.5	50	50	ENSMUST00000133257.9	ENSMUSG00000117819.2	Gm50253	chr17	protein_coding	predicted gene, 50253
chr17	27244433	27246405	+	27244433	27247807	A3SS	0.25	50	50	ENSMUST00000133257.9	ENSMUSG00000117819.2	Gm50253	chr17	protein_coding	predicted gene, 50253
chr17	27244433	27247258	+	27244433	27247807	A3SS	0.25	50	50	ENSMUST00000133257.9	ENSMUSG00000117819.2	Gm50253	chr17	protein_coding	predicted gene, 50253
chr17	27237144	27244311	+	27195369	27244311	A5SS	0.33	50	50	ENSMUST00000133257.9	ENSMUSG00000117819.2	Gm50253	chr17	protein_coding	predicted gene, 50253
chr17	27241314	27244311	+	27195369	27244311	A5SS	0.33	50	50	ENSMUST00000133257.9	ENSMUSG00000117819.2	Gm50253	chr17	protein_coding	predicted gene, 50253
chr17	27237144	27244311	+	27237144	27241225	3pMXE	0.5	50	50	ENSMUST00000142141.3	ENSMUSG00000048731.16	Ggnbp1	chr17	protein_coding	gametogenetin binding protein 1
chr17	27237144;27241314	27241225;27244311	+	27237144	27244311	cassetteExon	0.5	100	100	ENSMUST00000122106.9	ENSMUSG00000048731.16	Ggnbp1	chr17	protein_coding	gametogenetin binding protein 1
chr17	27244433	27246405	+	27244433	27249650	A3SS	0.25	50	50	ENSMUST00000122106.9	ENSMUSG00000048731.16	Ggnbp1	chr17	protein_coding	gametogenetin binding protein 1
chr17	27244433	27247258	+	27244433	27249650	A3SS	0.25	50	50	ENSMUST00000122106.9	ENSMUSG00000048731.16	Ggnbp1	chr17	protein_coding	gametogenetin binding protein 1
chr17	27244433	27247807	+	27244433	27249650	A3SS	0.25	50	50	ENSMUST00000122106.9	ENSMUSG00000048731.16	Ggnbp1	chr17	protein_coding	gametogenetin binding protein 1
chr17	27248920	27249650	+	27244433	27249650	A5SS	0.5	50	50	ENSMUST00000122106.9	ENSMUSG00000048731.16	Ggnbp1	chr17	protein_coding	gametogenetin binding protein 1
chr17	27244433	27246405	+	27244433	27247258	A3SS	0.25	50	50	ENSMUST00000235268.2	ENSMUSG00000048731.16	Ggnbp1	chr17	protein_coding	gametogenetin binding protein 1
chr17	27240321;27240656	27240637;27241413	-	27240321	27241413	cassetteExon	0.5	100	100	ENSMUST00000078691.12	ENSMUSG00000057789.15	Bak1	chr17	protein_coding	BCL2-antagonist/killer 1
chr17	27239876	27241413	-	27240321	27241413	A3SS&ES	0.33	50	50	ENSMUST00000078691.12	ENSMUSG00000057789.15	Bak1	chr17	protein_coding	BCL2-antagonist/killer 1
chr17	27241846	27244767	-	27241851	27244767	A3SS	0.5	50	50	ENSMUST00000078691.12	ENSMUSG00000057789.15	Bak1	chr17	protein_coding	BCL2-antagonist/killer 1
chr17	27239876	27241413	-	27240656	27241413	A3SS&ES	0.33	50	50	ENSMUST00000025034.12	ENSMUSG00000057789.15	Bak1	chr17	protein_coding	BCL2-antagonist/killer 1
chr17	27344905	27352714	-	27344932	27352714	A3SS	0.5	50	50	ENSMUST00000025045.15	ENSMUSG00000024208.17	Uqcc2	chr17	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 2
chr17	27344932	27351805	-	27344932	27352714	A5SS	0.33	50	50	ENSMUST00000025045.15	ENSMUSG00000024208.17	Uqcc2	chr17	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 2
chr17	27344932	27352494	-	27344932	27352714	A5SS	0.33	50	50	ENSMUST00000025045.15	ENSMUSG00000024208.17	Uqcc2	chr17	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 2
chr17	27344932	27352494	-	27344932	27351805	A5SS&ES	0.5	50	50	ENSMUST00000145148.2	ENSMUSG00000024208.17	Uqcc2	chr17	protein_coding	ubiquinol-cytochrome c reductase complex assembly factor 2
chr17	27456111	27458359	-	27456111	27461548	A5SS	0.5	50	50	ENSMUST00000235429.2	ENSMUSG00000117916.2	9630028I04Rik	chr17	lncRNA	RIKEN cDNA 9630028I04 gene
chr17	27544195;27557885	27557717;27562758	+	27544195	27562758	cassetteExon	0.5	100	100	ENSMUST00000232285.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544195;27560530	27560430;27562758	+	27544195	27562758	cassetteExon	0.5	100	100	ENSMUST00000232285.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544195;27560624	27560430;27562758	+	27544195	27562758	cassetteExon	0.5	100	100	ENSMUST00000232285.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544195;27562556	27562275;27562758	+	27544195	27562758	cassetteExon	0.5	100	100	ENSMUST00000232285.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544195	27554900	+	27544195	27562758	A3SS	0.2	50	50	ENSMUST00000232285.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544255	27562758	+	27544195	27562758	A5SS	0.14	50	50	ENSMUST00000232285.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27561495	27562758	+	27544195	27562758	A5SS	0.14	50	50	ENSMUST00000232285.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544195	27557717	+	27544195;27555042	27554900;27557717	ES	0.25	50	50	ENSMUST00000232497.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544195;27560530	27560430;27562758	+	27544195;27557885	27554900;27562758	MXE	0.5	100	100	ENSMUST00000232497.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544195;27560624	27560430;27562758	+	27544195;27557885	27554900;27562758	MXE	0.5	100	100	ENSMUST00000232497.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544195;27562556	27562275;27562758	+	27544195;27557885	27554900;27562758	MXE	0.5	100	100	ENSMUST00000232497.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27555042;27557297	27557127;27557717	+	27555042	27557717	cassetteExon	0.5	100	100	ENSMUST00000232497.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27555042;27560530	27560430;27562758	+	27555042;27557885	27557717;27562758	MXE	0.5	100	100	ENSMUST00000232497.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27555042;27560624	27560430;27562758	+	27555042;27557885	27557717;27562758	MXE	0.5	100	100	ENSMUST00000232497.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27557885;27560530	27560430;27562758	+	27557885	27562758	cassetteExon	0.5	100	100	ENSMUST00000232497.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27557885;27560624	27560430;27562758	+	27557885	27562758	cassetteExon	0.5	100	100	ENSMUST00000232497.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27557885;27562556	27562275;27562758	+	27557885	27562758	cassetteExon	0.5	100	100	ENSMUST00000232497.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544255	27557717	+	27555042	27557717	A5SS&ES	0.25	50	50	ENSMUST00000232497.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544255	27562758	+	27557885	27562758	A5SS&ES	0.14	50	50	ENSMUST00000232497.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27551418	27554900	+	27544195	27554900	A5SS	0.5	50	50	ENSMUST00000232497.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27561495	27562758	+	27557885	27562758	A5SS	0.14	50	50	ENSMUST00000232497.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544195;27557885	27557717;27562275	+	27544195	27562275	cassetteExon	0.5	100	100	ENSMUST00000232070.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544195;27557885	27557717;27562758	+	27544195;27562556	27562275;27562758	MXE	0.5	100	100	ENSMUST00000232070.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544195;27560530	27560430;27562758	+	27544195;27562556	27562275;27562758	MXE	0.5	100	100	ENSMUST00000232070.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544195;27560624	27560430;27562275	+	27544195	27562275	cassetteExon	0.5	100	100	ENSMUST00000232070.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544195;27560624	27560430;27562758	+	27544195;27562556	27562275;27562758	MXE	0.5	100	100	ENSMUST00000232070.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544195	27554900	+	27544195	27562275	A3SS	0.2	50	50	ENSMUST00000232070.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544255	27562758	+	27562556	27562758	A5SS&ES	0.14	50	50	ENSMUST00000232070.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27561495	27562275	+	27544195	27562275	A5SS	0.2	50	50	ENSMUST00000232070.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27561495	27562758	+	27562556	27562758	A5SS&ES	0.14	50	50	ENSMUST00000232070.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27561791	27562275	+	27544195	27562275	A5SS	0.2	50	50	ENSMUST00000232070.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544195	27560430	+	27544195;27557885	27557717;27560430	ES	0.25	50	50	ENSMUST00000232363.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544195;27555042	27554900;27560430	+	27544195;27557885	27557717;27560430	MXE	0.5	100	100	ENSMUST00000232363.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544195;27562556	27562275;27562758	+	27544195;27560530	27557717;27562758	MXE	0.5	100	100	ENSMUST00000232363.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27557885;27562556	27562275;27562758	+	27557885;27560530	27560430;27562758	MXE	0.5	100	100	ENSMUST00000232363.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544255	27557717	+	27544195	27557717	A5SS	0.25	50	50	ENSMUST00000232363.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544255	27562758	+	27560530	27562758	A5SS&ES	0.14	50	50	ENSMUST00000232363.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27557297	27557717	+	27544195	27557717	A5SS	0.25	50	50	ENSMUST00000232363.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27559810	27560430	+	27557885	27560430	A5SS	0.25	50	50	ENSMUST00000232363.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27560624	27562758	+	27560530	27562758	A5SS	0.14	50	50	ENSMUST00000232363.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27561495	27562758	+	27560530	27562758	A5SS	0.14	50	50	ENSMUST00000232363.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544195	27562758	+	27544195	27562275	A3SS	0.2	50	50	ENSMUST00000231707.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544195;27562556	27562275;27562758	+	27544195;27560624	27557717;27562758	MXE	0.5	100	100	ENSMUST00000231262.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27557885;27562556	27562275;27562758	+	27557885;27560624	27560430;27562758	MXE	0.5	100	100	ENSMUST00000231262.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27560624;27562556	27562275;27562758	+	27560624	27562758	cassetteExon	0.5	100	100	ENSMUST00000231262.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27560624;27562556	27562342;27562758	+	27560624	27562758	cassetteExon	0.5	100	100	ENSMUST00000231262.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544255	27562758	+	27560624	27562758	A5SS&ES	0.14	50	50	ENSMUST00000231262.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27561495	27562758	+	27560624	27562758	A5SS	0.14	50	50	ENSMUST00000231262.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544195;27560530	27560430;27562758	+	27544195;27557885	27557717;27562758	MXE	0.5	100	100	ENSMUST00000231770.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544195;27560624	27560430;27562758	+	27544195;27557885	27557717;27562758	MXE	0.5	100	100	ENSMUST00000231770.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544195;27560530	27560430;27562758	+	27544195;27562556	27557717;27562758	MXE	0.5	100	100	ENSMUST00000231462.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544195;27560624	27560430;27562275	+	27544195;27557885	27557717;27562275	MXE	0.5	100	100	ENSMUST00000231462.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544195;27560624	27560430;27562758	+	27544195;27562556	27557717;27562758	MXE	0.5	100	100	ENSMUST00000231462.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27557885;27560624	27560430;27562275	+	27557885	27562275	cassetteExon	0.5	100	100	ENSMUST00000231462.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27561495	27562275	+	27557885	27562275	A5SS	0.2	50	50	ENSMUST00000231462.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27561791	27562275	+	27557885	27562275	A5SS	0.2	50	50	ENSMUST00000231462.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544195;27555042	27554900;27560430	+	27544195	27560430	cassetteExon	0.5	100	100	ENSMUST00000231336.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27559810	27560430	+	27544195	27560430	A5SS	0.25	50	50	ENSMUST00000231336.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544195	27562758	+	27544195	27557717	A3SS&ES	0.2	50	50	ENSMUST00000232675.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27557885	27562758	+	27557885	27562275	A3SS	0.33	50	50	ENSMUST00000232675.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27557885	27562758	+	27557885	27560430	A3SS&ES	0.33	50	50	ENSMUST00000232171.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27560624	27562342	+	27560624	27562275	A3SS	0.33	50	50	ENSMUST00000232171.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27560624	27562758	+	27560624	27562275	A3SS	0.33	50	50	ENSMUST00000232171.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27561495	27562275	+	27560624	27562275	A5SS	0.2	50	50	ENSMUST00000232171.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27561791	27562275	+	27560624	27562275	A5SS	0.2	50	50	ENSMUST00000232171.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544255;27557885	27557717;27562758	+	27544255	27562758	cassetteExon	0.5	100	100	ENSMUST00000231637.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27561495	27562758	+	27544255	27562758	A5SS	0.14	50	50	ENSMUST00000231637.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544195	27562758	+	27557885	27562758	A5SS&ES	0.14	50	50	ENSMUST00000232125.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27557297	27557717	+	27544255	27557717	A5SS	0.25	50	50	ENSMUST00000232125.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27557885	27562275	+	27557885	27560430	A3SS&ES	0.33	50	50	ENSMUST00000231456.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27560530	27562758	+	27562556	27562758	A5SS&ES	0.2	50	50	ENSMUST00000231456.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544195	27557717	+	27555042	27557717	5pMXE	0.25	50	50	ENSMUST00000231346.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27555042;27560624	27560430;27562275	+	27555042;27557885	27557717;27562275	MXE	0.5	100	100	ENSMUST00000231346.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27544195	27560430	+	27555042	27560430	5pMXE	0.25	50	50	ENSMUST00000231771.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27555042;27557885	27557717;27560430	+	27555042	27560430	cassetteExon	0.5	100	100	ENSMUST00000231771.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27555042	27557127	+	27555042	27560430	A3SS	0.33	50	50	ENSMUST00000231771.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27559810	27560430	+	27555042	27560430	A5SS	0.25	50	50	ENSMUST00000231771.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27555042	27557717	+	27557297	27557717	5pMXE	0.25	50	50	ENSMUST00000232337.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27561495	27562758	+	27561495	27562275	A3SS	0.5	50	50	ENSMUST00000151398.3	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27561791	27562275	+	27561495	27562275	A5SS	0.2	50	50	ENSMUST00000151398.3	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27561495;27562556	27562275;27562758	+	27561495	27562758	cassetteExon	0.5	100	100	ENSMUST00000231649.2	ENSMUSG00000073430.6	Gm10505	chr17	lncRNA	predicted gene 10505
chr17	27657836	27670879	-	27657836;27669239	27669099;27670879	ES	0.33	50	50	ENSMUST00000118489.8	ENSMUSG00000063239.18	Grm4	chr17	protein_coding	glutamate receptor, metabotropic 4
chr17	27673596	27721621	-	27673596;27692098	27691882;27721621	ES	0.5	50	50	ENSMUST00000118489.8	ENSMUSG00000063239.18	Grm4	chr17	protein_coding	glutamate receptor, metabotropic 4
chr17	27692098	27739883	-	27692098	27721621	5pMXE	0.5	50	50	ENSMUST00000118489.8	ENSMUSG00000063239.18	Grm4	chr17	protein_coding	glutamate receptor, metabotropic 4
chr17	27650552	27653507	-	27641755	27653507	A3SS	0.5	50	50	ENSMUST00000118489.8	ENSMUSG00000063239.18	Grm4	chr17	protein_coding	glutamate receptor, metabotropic 4
chr17	27670796	27670879	-	27669239	27670879	A3SS	0.33	50	50	ENSMUST00000118489.8	ENSMUSG00000063239.18	Grm4	chr17	protein_coding	glutamate receptor, metabotropic 4
chr17	27722507	27732607	-	27722507	27731766	5pMXE	0.5	50	50	ENSMUST00000118161.3	ENSMUSG00000063239.18	Grm4	chr17	protein_coding	glutamate receptor, metabotropic 4
chr17	27670796	27670879	-	27657836	27670879	A3SS	0.33	50	50	ENSMUST00000231416.2	ENSMUSG00000063239.18	Grm4	chr17	protein_coding	glutamate receptor, metabotropic 4
chr17	27673596	27721621	-	27673596	27691882	A5SS&ES	0.5	50	50	ENSMUST00000231416.2	ENSMUSG00000063239.18	Grm4	chr17	protein_coding	glutamate receptor, metabotropic 4
chr17	27657836	27670879	-	27669239	27670879	3pMXE	0.33	50	50	ENSMUST00000146277.8	ENSMUSG00000063239.18	Grm4	chr17	protein_coding	glutamate receptor, metabotropic 4
chr17	27775685	27778507	+	27775685;27776040	27775926;27778507	ES	0.25	50	50	ENSMUST00000118599.9	ENSMUSG00000046711.17	Hmga1	chr17	protein_coding	high mobility group AT-hook 1
chr17	27780485	27782484	+	27780485	27781412	3pMXE	0.33	50	50	ENSMUST00000118599.9	ENSMUSG00000046711.17	Hmga1	chr17	protein_coding	high mobility group AT-hook 1
chr17	27778677	27779890	+	27778677	27779902	A3SS	0.33	50	50	ENSMUST00000118599.9	ENSMUSG00000046711.17	Hmga1	chr17	protein_coding	high mobility group AT-hook 1
chr17	27778677	27779906	+	27778677	27779902	A3SS	0.33	50	50	ENSMUST00000118599.9	ENSMUSG00000046711.17	Hmga1	chr17	protein_coding	high mobility group AT-hook 1
chr17	27779985	27780439	+	27779985	27780435	A3SS	0.5	50	50	ENSMUST00000118599.9	ENSMUSG00000046711.17	Hmga1	chr17	protein_coding	high mobility group AT-hook 1
chr17	27780485	27781415	+	27780485	27781412	A3SS	0.33	50	50	ENSMUST00000118599.9	ENSMUSG00000046711.17	Hmga1	chr17	protein_coding	high mobility group AT-hook 1
chr17	27775683	27778507	+	27776040	27778507	A5SS&ES	0.25	50	50	ENSMUST00000118599.9	ENSMUSG00000046711.17	Hmga1	chr17	protein_coding	high mobility group AT-hook 1
chr17	27775723	27778507	+	27776040	27778507	A5SS&ES	0.25	50	50	ENSMUST00000118599.9	ENSMUSG00000046711.17	Hmga1	chr17	protein_coding	high mobility group AT-hook 1
chr17	27778644	27779902	+	27778677	27779902	A5SS	0.5	50	50	ENSMUST00000118599.9	ENSMUSG00000046711.17	Hmga1	chr17	protein_coding	high mobility group AT-hook 1
chr17	27775683	27778507	+	27775685	27778507	A5SS	0.25	50	50	ENSMUST00000232265.2	ENSMUSG00000046711.17	Hmga1	chr17	protein_coding	high mobility group AT-hook 1
chr17	27775723	27778507	+	27775685	27778507	A5SS	0.25	50	50	ENSMUST00000232265.2	ENSMUSG00000046711.17	Hmga1	chr17	protein_coding	high mobility group AT-hook 1
chr17	27775723	27778507	+	27775683	27778507	A5SS	0.25	50	50	ENSMUST00000232013.2	ENSMUSG00000046711.17	Hmga1	chr17	protein_coding	high mobility group AT-hook 1
chr17	27775685	27778507	+	27776040	27778507	A5SS	0.25	50	50	ENSMUST00000231874.2	ENSMUSG00000046711.17	Hmga1	chr17	protein_coding	high mobility group AT-hook 1
chr17	27780485	27781415	+	27780485	27782484	A3SS	0.33	50	50	ENSMUST00000231780.2	ENSMUSG00000046711.17	Hmga1	chr17	protein_coding	high mobility group AT-hook 1
chr17	27778677	27779890	+	27778677	27779906	A3SS	0.33	50	50	ENSMUST00000231243.2	ENSMUSG00000046711.17	Hmga1	chr17	protein_coding	high mobility group AT-hook 1
chr17	27783228	27783536	-	27783228;27783384	27783359;27783536	ES	0.33	50	50	ENSMUST00000154473.9	ENSMUSG00000062753.15	AI413582	chr17	protein_coding	expressed sequence AI413582
chr17	27783189	27783359	-	27783228	27783359	A3SS	0.5	50	50	ENSMUST00000154473.9	ENSMUSG00000062753.15	AI413582	chr17	protein_coding	expressed sequence AI413582
chr17	27783313	27783536	-	27783384	27783536	A3SS&ES	0.33	50	50	ENSMUST00000154473.9	ENSMUSG00000062753.15	AI413582	chr17	protein_coding	expressed sequence AI413582
chr17	27783384	27783596	-	27783384	27783536	A5SS	0.5	50	50	ENSMUST00000154473.9	ENSMUSG00000062753.15	AI413582	chr17	protein_coding	expressed sequence AI413582
chr17	27783724	27784219	-	27783724	27784634	A5SS	0.33	50	50	ENSMUST00000154473.9	ENSMUSG00000062753.15	AI413582	chr17	protein_coding	expressed sequence AI413582
chr17	27783724	27784350	-	27783724	27784634	A5SS	0.33	50	50	ENSMUST00000154473.9	ENSMUSG00000062753.15	AI413582	chr17	protein_coding	expressed sequence AI413582
chr17	27783228	27783536	-	27783384	27783536	A3SS	0.33	50	50	ENSMUST00000231365.2	ENSMUSG00000062753.15	AI413582	chr17	protein_coding	expressed sequence AI413582
chr17	27783724	27784219	-	27783724	27784350	A5SS	0.33	50	50	ENSMUST00000232276.2	ENSMUSG00000062753.15	AI413582	chr17	protein_coding	expressed sequence AI413582
chr17	27783228	27783536	-	27783313	27783536	A3SS	0.33	50	50	ENSMUST00000080190.9	ENSMUSG00000062753.15	AI413582	chr17	protein_coding	expressed sequence AI413582
chr17	27783228	27783536	-	27783228	27783359	A5SS&ES	0.5	50	50	ENSMUST00000231753.2	ENSMUSG00000062753.15	AI413582	chr17	protein_coding	expressed sequence AI413582
chr17	27801066	27815698	-	27801066;27802230	27802186;27815698	ES	0.5	50	50	ENSMUST00000025050.13	ENSMUSG00000024213.15	Nudt3	chr17	protein_coding	nudix (nucleotide diphosphate linked moiety X)-type motif 3
chr17	27815808	27850174	-	27815808	27842061	5pMXE	0.16	50	50	ENSMUST00000025050.13	ENSMUSG00000024213.15	Nudt3	chr17	protein_coding	nudix (nucleotide diphosphate linked moiety X)-type motif 3
chr17	27799901	27800982	-	27799928	27800982	A3SS	0.5	50	50	ENSMUST00000025050.13	ENSMUSG00000024213.15	Nudt3	chr17	protein_coding	nudix (nucleotide diphosphate linked moiety X)-type motif 3
chr17	27815808	27816055	-	27815808	27842061	A5SS	0.16	50	50	ENSMUST00000025050.13	ENSMUSG00000024213.15	Nudt3	chr17	protein_coding	nudix (nucleotide diphosphate linked moiety X)-type motif 3
chr17	27815808	27830518	-	27815808	27842061	A5SS	0.16	50	50	ENSMUST00000025050.13	ENSMUSG00000024213.15	Nudt3	chr17	protein_coding	nudix (nucleotide diphosphate linked moiety X)-type motif 3
chr17	27815808	27841306	-	27815808	27842061	A5SS	0.16	50	50	ENSMUST00000025050.13	ENSMUSG00000024213.15	Nudt3	chr17	protein_coding	nudix (nucleotide diphosphate linked moiety X)-type motif 3
chr17	27815808	27841565	-	27815808	27842061	A5SS	0.16	50	50	ENSMUST00000025050.13	ENSMUSG00000024213.15	Nudt3	chr17	protein_coding	nudix (nucleotide diphosphate linked moiety X)-type motif 3
chr17	27815808	27830518	-	27815808	27816055	5pMXE	0.16	50	50	ENSMUST00000231742.2	ENSMUSG00000024213.15	Nudt3	chr17	protein_coding	nudix (nucleotide diphosphate linked moiety X)-type motif 3
chr17	27815808	27841306	-	27815808	27816055	5pMXE	0.16	50	50	ENSMUST00000231742.2	ENSMUSG00000024213.15	Nudt3	chr17	protein_coding	nudix (nucleotide diphosphate linked moiety X)-type motif 3
chr17	27815808	27841565	-	27815808	27816055	5pMXE	0.16	50	50	ENSMUST00000231742.2	ENSMUSG00000024213.15	Nudt3	chr17	protein_coding	nudix (nucleotide diphosphate linked moiety X)-type motif 3
chr17	27815808	27850174	-	27815808	27816055	5pMXE	0.16	50	50	ENSMUST00000231742.2	ENSMUSG00000024213.15	Nudt3	chr17	protein_coding	nudix (nucleotide diphosphate linked moiety X)-type motif 3
chr17	27815808	27850174	-	27815808	27841565	5pMXE	0.16	50	50	ENSMUST00000114886.8	ENSMUSG00000024213.15	Nudt3	chr17	protein_coding	nudix (nucleotide diphosphate linked moiety X)-type motif 3
chr17	27815808	27830518	-	27815808	27841565	A5SS	0.16	50	50	ENSMUST00000114886.8	ENSMUSG00000024213.15	Nudt3	chr17	protein_coding	nudix (nucleotide diphosphate linked moiety X)-type motif 3
chr17	27815808	27841306	-	27815808	27841565	A5SS	0.16	50	50	ENSMUST00000114886.8	ENSMUSG00000024213.15	Nudt3	chr17	protein_coding	nudix (nucleotide diphosphate linked moiety X)-type motif 3
chr17	27801066	27815698	-	27801066	27802186	5pMXE	0.5	50	50	ENSMUST00000133048.8	ENSMUSG00000024213.15	Nudt3	chr17	protein_coding	nudix (nucleotide diphosphate linked moiety X)-type motif 3
chr17	27815808	27850174	-	27815808	27841306	5pMXE	0.16	50	50	ENSMUST00000156429.9	ENSMUSG00000024213.15	Nudt3	chr17	protein_coding	nudix (nucleotide diphosphate linked moiety X)-type motif 3
chr17	27815808	27830518	-	27815808	27841306	A5SS	0.16	50	50	ENSMUST00000156429.9	ENSMUSG00000024213.15	Nudt3	chr17	protein_coding	nudix (nucleotide diphosphate linked moiety X)-type motif 3
chr17	27815808	27850174	-	27815808	27830518	5pMXE	0.16	50	50	ENSMUST00000127236.3	ENSMUSG00000024213.15	Nudt3	chr17	protein_coding	nudix (nucleotide diphosphate linked moiety X)-type motif 3
chr17	27853449	27855539	-	27853449	27854178	5pMXE	0.33	50	50	ENSMUST00000233710.2	ENSMUSG00000117338.2	Gm49804	chr17	protein_coding	predicted gene, 49804
chr17	27849480	27850174	-	27815808	27850174	A3SS	0.5	50	50	ENSMUST00000233710.2	ENSMUSG00000117338.2	Gm49804	chr17	protein_coding	predicted gene, 49804
chr17	27849480	27851253	-	27850229	27851253	A3SS&ES	0.5	50	50	ENSMUST00000233710.2	ENSMUSG00000117338.2	Gm49804	chr17	protein_coding	predicted gene, 49804
chr17	27853449	27853718	-	27853449	27854178	A5SS	0.33	50	50	ENSMUST00000233710.2	ENSMUSG00000117338.2	Gm49804	chr17	protein_coding	predicted gene, 49804
chr17	27849480	27851253	-	27849480;27850229	27850174;27851253	ES	0.5	50	50	ENSMUST00000114882.9	ENSMUSG00000052146.17	Rps10	chr17	protein_coding	ribosomal protein S10
chr17	27853449	27853718	-	27853449	27855539	A5SS	0.33	50	50	ENSMUST00000114881.9	ENSMUSG00000052146.17	Rps10	chr17	protein_coding	ribosomal protein S10
chr17	27874733	27920741	+	27874733	27920706	A3SS	0.33	50	50	ENSMUST00000114873.8	ENSMUSG00000040276.16	Pacsin1	chr17	protein_coding	protein kinase C and casein kinase substrate in neurons 1
chr17	27874733	27920800	+	27874733	27920706	A3SS	0.33	50	50	ENSMUST00000114873.8	ENSMUSG00000040276.16	Pacsin1	chr17	protein_coding	protein kinase C and casein kinase substrate in neurons 1
chr17	27904399	27920706	+	27874733	27920706	A5SS	0.5	50	50	ENSMUST00000114873.8	ENSMUSG00000040276.16	Pacsin1	chr17	protein_coding	protein kinase C and casein kinase substrate in neurons 1
chr17	27923526	27923819	+	27921830	27923819	A5SS	0.5	50	50	ENSMUST00000114873.8	ENSMUSG00000040276.16	Pacsin1	chr17	protein_coding	protein kinase C and casein kinase substrate in neurons 1
chr17	27927037	27927400	+	27927041	27927400	A5SS	0.5	50	50	ENSMUST00000114873.8	ENSMUSG00000040276.16	Pacsin1	chr17	protein_coding	protein kinase C and casein kinase substrate in neurons 1
chr17	27874733	27920741	+	27874733	27920800	A3SS	0.33	50	50	ENSMUST00000045896.11	ENSMUSG00000040276.16	Pacsin1	chr17	protein_coding	protein kinase C and casein kinase substrate in neurons 1
chr17	27904399	27920800	+	27874733	27920800	A5SS	0.5	50	50	ENSMUST00000045896.11	ENSMUSG00000040276.16	Pacsin1	chr17	protein_coding	protein kinase C and casein kinase substrate in neurons 1
chr17	27904399	27920741	+	27874733	27920741	A5SS	0.5	50	50	ENSMUST00000232437.2	ENSMUSG00000040276.16	Pacsin1	chr17	protein_coding	protein kinase C and casein kinase substrate in neurons 1
chr17	27904399	27904707	+	27904399	27920800	A3SS	0.25	50	50	ENSMUST00000231669.2	ENSMUSG00000040276.16	Pacsin1	chr17	protein_coding	protein kinase C and casein kinase substrate in neurons 1
chr17	27904399	27920706	+	27904399	27920800	A3SS	0.25	50	50	ENSMUST00000231669.2	ENSMUSG00000040276.16	Pacsin1	chr17	protein_coding	protein kinase C and casein kinase substrate in neurons 1
chr17	27904399	27920741	+	27904399	27920800	A3SS	0.25	50	50	ENSMUST00000231669.2	ENSMUSG00000040276.16	Pacsin1	chr17	protein_coding	protein kinase C and casein kinase substrate in neurons 1
chr17	27904399	27904707	+	27904399	27920741	A3SS	0.25	50	50	ENSMUST00000097360.3	ENSMUSG00000040276.16	Pacsin1	chr17	protein_coding	protein kinase C and casein kinase substrate in neurons 1
chr17	27904399	27920706	+	27904399	27920741	A3SS	0.25	50	50	ENSMUST00000097360.3	ENSMUSG00000040276.16	Pacsin1	chr17	protein_coding	protein kinase C and casein kinase substrate in neurons 1
chr17	27904399	27920706	+	27904399	27904707	3pMXE	0.25	50	50	ENSMUST00000155259.2	ENSMUSG00000040276.16	Pacsin1	chr17	protein_coding	protein kinase C and casein kinase substrate in neurons 1
chr17	27936289	27936998	-	27936289;27936439	27936392;27936998	ES	0.33	50	50	ENSMUST00000025054.10	ENSMUSG00000024215.15	Spdef	chr17	protein_coding	SAM pointed domain containing ets transcription factor
chr17	27936513	27936998	-	27936439	27936998	A3SS	0.33	50	50	ENSMUST00000025054.10	ENSMUSG00000024215.15	Spdef	chr17	protein_coding	SAM pointed domain containing ets transcription factor
chr17	27936289	27936998	-	27936289;27936513	27936392;27936998	ES	0.33	50	50	ENSMUST00000233880.2	ENSMUSG00000024215.15	Spdef	chr17	protein_coding	SAM pointed domain containing ets transcription factor
chr17	27936289	27936998	-	27936289	27936392	5pMXE	0.5	50	50	ENSMUST00000127622.3	ENSMUSG00000024215.15	Spdef	chr17	protein_coding	SAM pointed domain containing ets transcription factor
chr17	27972969	28005045	-	27972969;27987213	27986885;28005045	ES	0.5	50	50	ENSMUST00000114863.10	ENSMUSG00000056692.14	Ilrun	chr17	protein_coding	inflammation and lipid regulator with UBA-like and NBR1-like domains
chr17	27987213	28012883	-	27987213;28005242	28005045;28012883	ES	0.5	50	50	ENSMUST00000114863.10	ENSMUSG00000056692.14	Ilrun	chr17	protein_coding	inflammation and lipid regulator with UBA-like and NBR1-like domains
chr17	27972969	27987110	-	27972969	27986885	A5SS	0.33	50	50	ENSMUST00000114863.10	ENSMUSG00000056692.14	Ilrun	chr17	protein_coding	inflammation and lipid regulator with UBA-like and NBR1-like domains
chr17	27972969	28005045	-	27972969;27987213	27987110;28005045	ES	0.5	50	50	ENSMUST00000114859.9	ENSMUSG00000056692.14	Ilrun	chr17	protein_coding	inflammation and lipid regulator with UBA-like and NBR1-like domains
chr17	27977946	27987110	-	27972969	27987110	A3SS	0.5	50	50	ENSMUST00000114859.9	ENSMUSG00000056692.14	Ilrun	chr17	protein_coding	inflammation and lipid regulator with UBA-like and NBR1-like domains
chr17	27972969;28005242	28005045;28012883	-	27972969;27987213	27986885;28012883	MXE	0.5	100	100	ENSMUST00000233131.2	ENSMUSG00000056692.14	Ilrun	chr17	protein_coding	inflammation and lipid regulator with UBA-like and NBR1-like domains
chr17	27972969;27987213	27987110;28012883	-	27972969;28005242	28005045;28012883	MXE	0.5	100	100	ENSMUST00000233508.2	ENSMUSG00000056692.14	Ilrun	chr17	protein_coding	inflammation and lipid regulator with UBA-like and NBR1-like domains
chr17	27972969	28005045	-	27987213	28005045	3pMXE	0.5	50	50	ENSMUST00000075076.6	ENSMUSG00000056692.14	Ilrun	chr17	protein_coding	inflammation and lipid regulator with UBA-like and NBR1-like domains
chr17	27987213	28012883	-	28005242	28012883	3pMXE	0.5	50	50	ENSMUST00000233035.2	ENSMUSG00000056692.14	Ilrun	chr17	protein_coding	inflammation and lipid regulator with UBA-like and NBR1-like domains
chr17	28059337	28059438	+	28059143	28059438	A5SS	0.5	50	50	ENSMUST00000232873.2	ENSMUSG00000024217.11	Snrpc	chr17	protein_coding	U1 small nuclear ribonucleoprotein C
chr17	28059780	28061244	+	28059480	28061244	A5SS	0.5	50	50	ENSMUST00000232873.2	ENSMUSG00000024217.11	Snrpc	chr17	protein_coding	U1 small nuclear ribonucleoprotein C
chr17	28109170;28109544	28109483;28112115	+	28109170	28112115	cassetteExon	0.5	100	100	ENSMUST00000114849.3	ENSMUSG00000039512.13	Uhrf1bp1	chr17	protein_coding	UHRF1 (ICBP90) binding protein 1
chr17	28075643	28095637	+	28075768	28095637	A5SS	0.33	50	50	ENSMUST00000114849.3	ENSMUSG00000039512.13	Uhrf1bp1	chr17	protein_coding	UHRF1 (ICBP90) binding protein 1
chr17	28076278	28095637	+	28075768	28095637	A5SS	0.33	50	50	ENSMUST00000114849.3	ENSMUSG00000039512.13	Uhrf1bp1	chr17	protein_coding	UHRF1 (ICBP90) binding protein 1
chr17	28076278	28095637	+	28075643	28095637	A5SS	0.33	50	50	ENSMUST00000233809.2	ENSMUSG00000039512.13	Uhrf1bp1	chr17	protein_coding	UHRF1 (ICBP90) binding protein 1
chr17	28124384;28125008	28124894;28126475	-	28124384	28126475	cassetteExon	0.5	100	100	ENSMUST00000114848.8	ENSMUSG00000024218.14	Taf11	chr17	protein_coding	TATA-box binding protein associated factor 11
chr17	28127217	28127744	-	28127217	28127755	A5SS	0.5	50	50	ENSMUST00000114848.8	ENSMUSG00000024218.14	Taf11	chr17	protein_coding	TATA-box binding protein associated factor 11
chr17	28195691	28204040	+	28195691;28197463	28197401;28204040	ES	0.5	50	50	ENSMUST00000114842.9	ENSMUSG00000024219.17	Anks1	chr17	protein_coding	ankyrin repeat and SAM domain containing 1
chr17	28277434;28277820	28277722;28278268	+	28277434	28278268	cassetteExon	0.5	100	100	ENSMUST00000114842.9	ENSMUSG00000024219.17	Anks1	chr17	protein_coding	ankyrin repeat and SAM domain containing 1
chr17	28128620	28132043	+	28128620	28193879	A3SS	0.5	50	50	ENSMUST00000114842.9	ENSMUSG00000024219.17	Anks1	chr17	protein_coding	ankyrin repeat and SAM domain containing 1
chr17	28260168	28261544	+	28257120	28261544	A5SS	0.33	50	50	ENSMUST00000114842.9	ENSMUSG00000024219.17	Anks1	chr17	protein_coding	ankyrin repeat and SAM domain containing 1
chr17	28261437	28261544	+	28257120	28261544	A5SS	0.33	50	50	ENSMUST00000114842.9	ENSMUSG00000024219.17	Anks1	chr17	protein_coding	ankyrin repeat and SAM domain containing 1
chr17	28261437	28261544	+	28260168	28261544	A5SS	0.33	50	50	ENSMUST00000233869.2	ENSMUSG00000024219.17	Anks1	chr17	protein_coding	ankyrin repeat and SAM domain containing 1
chr17	28277434	28278268	+	28277434	28277722	A3SS	0.5	50	50	ENSMUST00000232769.2	ENSMUSG00000024219.17	Anks1	chr17	protein_coding	ankyrin repeat and SAM domain containing 1
chr17	28290805	28296960	-	28290805;28293746	28293626;28296960	ES	0.33	50	50	ENSMUST00000042692.13	ENSMUSG00000062859.16	Tcp11	chr17	protein_coding	t-complex protein 11
chr17	28288563	28289397	-	28288646	28289397	A3SS	0.5	50	50	ENSMUST00000042692.13	ENSMUSG00000062859.16	Tcp11	chr17	protein_coding	t-complex protein 11
chr17	28295440	28296960	-	28293746	28296960	A3SS	0.33	50	50	ENSMUST00000042692.13	ENSMUSG00000062859.16	Tcp11	chr17	protein_coding	t-complex protein 11
chr17	28286927	28287400	-	28286927	28288157	A5SS	0.5	50	50	ENSMUST00000042692.13	ENSMUSG00000062859.16	Tcp11	chr17	protein_coding	t-complex protein 11
chr17	28297032	28298565	-	28297032	28298896	A5SS	0.2	50	50	ENSMUST00000042692.13	ENSMUSG00000062859.16	Tcp11	chr17	protein_coding	t-complex protein 11
chr17	28297032	28298712	-	28297032	28298896	A5SS	0.2	50	50	ENSMUST00000042692.13	ENSMUSG00000062859.16	Tcp11	chr17	protein_coding	t-complex protein 11
chr17	28297032	28298901	-	28297032	28298896	A5SS	0.2	50	50	ENSMUST00000042692.13	ENSMUSG00000062859.16	Tcp11	chr17	protein_coding	t-complex protein 11
chr17	28297032	28299133	-	28297032	28298896	A5SS	0.2	50	50	ENSMUST00000042692.13	ENSMUSG00000062859.16	Tcp11	chr17	protein_coding	t-complex protein 11
chr17	28299279	28299441	-	28299279	28299494	A5SS	0.33	50	50	ENSMUST00000042692.13	ENSMUSG00000062859.16	Tcp11	chr17	protein_coding	t-complex protein 11
chr17	28299279	28299549	-	28299279	28299494	A5SS	0.33	50	50	ENSMUST00000042692.13	ENSMUSG00000062859.16	Tcp11	chr17	protein_coding	t-complex protein 11
chr17	28297032	28298565	-	28297032	28299133	A5SS	0.2	50	50	ENSMUST00000114836.9	ENSMUSG00000062859.16	Tcp11	chr17	protein_coding	t-complex protein 11
chr17	28297032	28298712	-	28297032	28299133	A5SS	0.2	50	50	ENSMUST00000114836.9	ENSMUSG00000062859.16	Tcp11	chr17	protein_coding	t-complex protein 11
chr17	28297032	28298901	-	28297032	28299133	A5SS	0.2	50	50	ENSMUST00000114836.9	ENSMUSG00000062859.16	Tcp11	chr17	protein_coding	t-complex protein 11
chr17	28299279	28299441	-	28299279	28299549	A5SS	0.33	50	50	ENSMUST00000129046.9	ENSMUSG00000062859.16	Tcp11	chr17	protein_coding	t-complex protein 11
chr17	28290805	28296960	-	28290805	28293626	5pMXE	0.5	50	50	ENSMUST00000233961.2	ENSMUSG00000062859.16	Tcp11	chr17	protein_coding	t-complex protein 11
chr17	28297032	28298901	-	28297032	28298565	5pMXE	0.2	50	50	ENSMUST00000232728.2	ENSMUSG00000062859.16	Tcp11	chr17	protein_coding	t-complex protein 11
chr17	28295440	28296960	-	28290805	28296960	A3SS	0.33	50	50	ENSMUST00000232728.2	ENSMUSG00000062859.16	Tcp11	chr17	protein_coding	t-complex protein 11
chr17	28297564	28298565	-	28297032	28298565	A3SS	0.5	50	50	ENSMUST00000232728.2	ENSMUSG00000062859.16	Tcp11	chr17	protein_coding	t-complex protein 11
chr17	28297032	28298712	-	28297032	28298565	A5SS	0.2	50	50	ENSMUST00000232728.2	ENSMUSG00000062859.16	Tcp11	chr17	protein_coding	t-complex protein 11
chr17	28297032	28298901	-	28297032	28298712	A5SS	0.2	50	50	ENSMUST00000233615.2	ENSMUSG00000062859.16	Tcp11	chr17	protein_coding	t-complex protein 11
chr17	28384616	28385331	+	28384616;28385122	28384961;28385331	ES	0.5	50	50	ENSMUST00000043503.11	ENSMUSG00000038677.15	Scube3	chr17	protein_coding	signal peptide, CUB domain, EGF-like 3
chr17	28376163;28377902	28377855;28379786	+	28376163	28379786	cassetteExon	0.5	100	100	ENSMUST00000043503.11	ENSMUSG00000038677.15	Scube3	chr17	protein_coding	signal peptide, CUB domain, EGF-like 3
chr17	28375000	28375739	+	28375000	28375736	A3SS	0.5	50	50	ENSMUST00000043503.11	ENSMUSG00000038677.15	Scube3	chr17	protein_coding	signal peptide, CUB domain, EGF-like 3
chr17	28376163	28379786	+	28377902	28379786	5pMXE	0.5	50	50	ENSMUST00000232984.2	ENSMUSG00000038677.15	Scube3	chr17	protein_coding	signal peptide, CUB domain, EGF-like 3
chr17	28384616	28385331	+	28385122	28385331	5pMXE	0.5	50	50	ENSMUST00000142170.3	ENSMUSG00000038677.15	Scube3	chr17	protein_coding	signal peptide, CUB domain, EGF-like 3
chr17	28421572	28423429	+	28421572;28422224	28422060;28423429	ES	0.33	50	50	ENSMUST00000073534.10	ENSMUSG00000024220.15	Zfp523	chr17	protein_coding	zinc finger protein 523
chr17	28396499;28398667	28398531;28408771	+	28396499	28408771	cassetteExon	0.5	100	100	ENSMUST00000073534.10	ENSMUSG00000024220.15	Zfp523	chr17	protein_coding	zinc finger protein 523
chr17	28414199	28416725	+	28414199	28416748	A3SS	0.5	50	50	ENSMUST00000073534.10	ENSMUSG00000024220.15	Zfp523	chr17	protein_coding	zinc finger protein 523
chr17	28420107	28420325	+	28420107	28420235	A3SS	0.5	50	50	ENSMUST00000073534.10	ENSMUSG00000024220.15	Zfp523	chr17	protein_coding	zinc finger protein 523
chr17	28420414	28421075	+	28420414	28421089	A3SS	0.33	50	50	ENSMUST00000073534.10	ENSMUSG00000024220.15	Zfp523	chr17	protein_coding	zinc finger protein 523
chr17	28421322	28421394	+	28421322	28421409	A3SS	0.5	50	50	ENSMUST00000073534.10	ENSMUSG00000024220.15	Zfp523	chr17	protein_coding	zinc finger protein 523
chr17	28396389	28408771	+	28396499	28408771	A5SS	0.25	50	50	ENSMUST00000073534.10	ENSMUSG00000024220.15	Zfp523	chr17	protein_coding	zinc finger protein 523
chr17	28405184	28408771	+	28396499	28408771	A5SS	0.25	50	50	ENSMUST00000073534.10	ENSMUSG00000024220.15	Zfp523	chr17	protein_coding	zinc finger protein 523
chr17	28422234	28423429	+	28422224	28423429	A5SS	0.33	50	50	ENSMUST00000073534.10	ENSMUSG00000024220.15	Zfp523	chr17	protein_coding	zinc finger protein 523
chr17	28420414;28421572	28421075;28422060	+	28420414	28422060	cassetteExon	0.5	100	100	ENSMUST00000233841.2	ENSMUSG00000024220.15	Zfp523	chr17	protein_coding	zinc finger protein 523
chr17	28420414;28421572	28421075;28423429	+	28420414;28422224	28422060;28423429	MXE	0.5	100	100	ENSMUST00000233841.2	ENSMUSG00000024220.15	Zfp523	chr17	protein_coding	zinc finger protein 523
chr17	28420414;28421572	28421089;28422060	+	28420414	28422060	cassetteExon	0.5	100	100	ENSMUST00000233841.2	ENSMUSG00000024220.15	Zfp523	chr17	protein_coding	zinc finger protein 523
chr17	28420414;28421572	28421089;28423429	+	28420414;28422224	28422060;28423429	MXE	0.5	100	100	ENSMUST00000233841.2	ENSMUSG00000024220.15	Zfp523	chr17	protein_coding	zinc finger protein 523
chr17	28398667	28408771	+	28396389	28408771	A5SS	0.25	50	50	ENSMUST00000233841.2	ENSMUSG00000024220.15	Zfp523	chr17	protein_coding	zinc finger protein 523
chr17	28405184	28408771	+	28396389	28408771	A5SS	0.25	50	50	ENSMUST00000233841.2	ENSMUSG00000024220.15	Zfp523	chr17	protein_coding	zinc finger protein 523
chr17	28420414	28422060	+	28421572	28422060	A5SS&ES	0.5	50	50	ENSMUST00000145313.8	ENSMUSG00000024220.15	Zfp523	chr17	protein_coding	zinc finger protein 523
chr17	28405184	28408771	+	28398667	28408771	A5SS	0.33	50	50	ENSMUST00000002318.8	ENSMUSG00000024220.15	Zfp523	chr17	protein_coding	zinc finger protein 523
chr17	28420414	28422060	+	28420414	28421089	3pMXE	0.33	50	50	ENSMUST00000161275.3	ENSMUSG00000024220.15	Zfp523	chr17	protein_coding	zinc finger protein 523
chr17	28420414;28422234	28422060;28423429	+	28420414;28421572	28421089;28423429	MXE	0.5	100	100	ENSMUST00000233904.2	ENSMUSG00000024220.15	Zfp523	chr17	protein_coding	zinc finger protein 523
chr17	28421572;28422234	28422060;28423429	+	28421572	28423429	cassetteExon	0.5	100	100	ENSMUST00000233904.2	ENSMUSG00000024220.15	Zfp523	chr17	protein_coding	zinc finger protein 523
chr17	28421572	28423429	+	28421572	28422060	3pMXE	0.5	50	50	ENSMUST00000232845.2	ENSMUSG00000024220.15	Zfp523	chr17	protein_coding	zinc finger protein 523
chr17	28421572	28423429	+	28422224	28423429	5pMXE	0.33	50	50	ENSMUST00000233021.2	ENSMUSG00000024220.15	Zfp523	chr17	protein_coding	zinc finger protein 523
chr17	28436079	28438719	+	28436079;28436760	28436575;28438719	ES	0.5	50	50	ENSMUST00000002327.6	ENSMUSG00000002257.9	Def6	chr17	protein_coding	differentially expressed in FDCP 6
chr17	28426912	28430854	+	28426912	28435939	A3SS	0.25	50	50	ENSMUST00000002327.6	ENSMUSG00000002257.9	Def6	chr17	protein_coding	differentially expressed in FDCP 6
chr17	28426912	28435896	+	28426912	28435939	A3SS	0.25	50	50	ENSMUST00000002327.6	ENSMUSG00000002257.9	Def6	chr17	protein_coding	differentially expressed in FDCP 6
chr17	28436079	28436686	+	28436079	28436575	A3SS	0.25	50	50	ENSMUST00000002327.6	ENSMUSG00000002257.9	Def6	chr17	protein_coding	differentially expressed in FDCP 6
chr17	28428757	28435939	+	28426912	28435939	A5SS	0.5	50	50	ENSMUST00000002327.6	ENSMUSG00000002257.9	Def6	chr17	protein_coding	differentially expressed in FDCP 6
chr17	28436079;28439197	28438719;28442646	+	28436079	28442646	cassetteExon	0.5	100	100	ENSMUST00000233560.2	ENSMUSG00000002257.9	Def6	chr17	protein_coding	differentially expressed in FDCP 6
chr17	28436079	28436575	+	28436079	28442646	A3SS	0.25	50	50	ENSMUST00000233560.2	ENSMUSG00000002257.9	Def6	chr17	protein_coding	differentially expressed in FDCP 6
chr17	28436079	28436686	+	28436079	28442646	A3SS	0.25	50	50	ENSMUST00000233560.2	ENSMUSG00000002257.9	Def6	chr17	protein_coding	differentially expressed in FDCP 6
chr17	28436079	28438719	+	28436079	28436575	3pMXE	0.25	50	50	ENSMUST00000233958.2	ENSMUSG00000002257.9	Def6	chr17	protein_coding	differentially expressed in FDCP 6
chr17	28426912	28430854	+	28426912	28435896	A3SS	0.33	50	50	ENSMUST00000233958.2	ENSMUSG00000002257.9	Def6	chr17	protein_coding	differentially expressed in FDCP 6
chr17	28426912	28430854	+	28426912	28444819	A3SS	0.25	50	50	ENSMUST00000233170.2	ENSMUSG00000002257.9	Def6	chr17	protein_coding	differentially expressed in FDCP 6
chr17	28426912	28435896	+	28426912	28444819	A3SS	0.25	50	50	ENSMUST00000233170.2	ENSMUSG00000002257.9	Def6	chr17	protein_coding	differentially expressed in FDCP 6
chr17	28426912	28435939	+	28426912	28444819	A3SS	0.25	50	50	ENSMUST00000233170.2	ENSMUSG00000002257.9	Def6	chr17	protein_coding	differentially expressed in FDCP 6
chr17	28443160	28444819	+	28426912	28444819	A5SS	0.5	50	50	ENSMUST00000233170.2	ENSMUSG00000002257.9	Def6	chr17	protein_coding	differentially expressed in FDCP 6
chr17	28436079;28436760	28436686;28438719	+	28436079	28438719	cassetteExon	0.5	100	100	ENSMUST00000233264.2	ENSMUSG00000002257.9	Def6	chr17	protein_coding	differentially expressed in FDCP 6
chr17	28456069	28514315	+	28456069;28505441	28505235;28514315	ES	0.5	50	50	ENSMUST00000002320.16	ENSMUSG00000002250.17	Ppard	chr17	protein_coding	peroxisome proliferator activator receptor delta
chr17	28491218	28505235	+	28456069	28505235	A5SS	0.5	50	50	ENSMUST00000002320.16	ENSMUSG00000002250.17	Ppard	chr17	protein_coding	peroxisome proliferator activator receptor delta
chr17	28456069	28514315	+	28456069	28505235	A3SS&ES	0.5	50	50	ENSMUST00000232879.2	ENSMUSG00000002250.17	Ppard	chr17	protein_coding	peroxisome proliferator activator receptor delta
chr17	28505441	28514315	+	28505441	28517251	A3SS	0.5	50	50	ENSMUST00000232879.2	ENSMUSG00000002250.17	Ppard	chr17	protein_coding	peroxisome proliferator activator receptor delta
chr17	28516198	28517251	+	28505441	28517251	A5SS	0.5	50	50	ENSMUST00000232879.2	ENSMUSG00000002250.17	Ppard	chr17	protein_coding	peroxisome proliferator activator receptor delta
chr17	28456069;28505441	28505235;28517251	+	28456069;28516198	28514315;28517251	MXE	0.5	100	100	ENSMUST00000166744.8	ENSMUSG00000002250.17	Ppard	chr17	protein_coding	peroxisome proliferator activator receptor delta
chr17	28491218	28505235	+	28491218	28491945	3pMXE	0.5	50	50	ENSMUST00000144200.2	ENSMUSG00000002250.17	Ppard	chr17	protein_coding	peroxisome proliferator activator receptor delta
chr17	28535877	28536442	+	28535877;28536197	28536132;28536442	ES	0.5	50	50	ENSMUST00000114803.9	ENSMUSG00000007570.17	Fance	chr17	protein_coding	Fanconi anemia, complementation group E
chr17	28539830	28545126	+	28539830;28541745	28541620;28545126	ES	0.33	50	50	ENSMUST00000114803.9	ENSMUSG00000007570.17	Fance	chr17	protein_coding	Fanconi anemia, complementation group E
chr17	28541745;28542639	28542545;28545126	+	28541745	28545126	cassetteExon	0.5	100	100	ENSMUST00000114803.9	ENSMUSG00000007570.17	Fance	chr17	protein_coding	Fanconi anemia, complementation group E
chr17	28536585	28537036	+	28536585	28537007	A3SS	0.5	50	50	ENSMUST00000114803.9	ENSMUSG00000007570.17	Fance	chr17	protein_coding	Fanconi anemia, complementation group E
chr17	28537381	28537792	+	28537381	28539764	A3SS	0.5	50	50	ENSMUST00000114803.9	ENSMUSG00000007570.17	Fance	chr17	protein_coding	Fanconi anemia, complementation group E
chr17	28539830	28545068	+	28539830	28541620	A3SS&ES	0.33	50	50	ENSMUST00000114803.9	ENSMUSG00000007570.17	Fance	chr17	protein_coding	Fanconi anemia, complementation group E
chr17	28541745	28545068	+	28541745	28545126	A3SS	0.33	50	50	ENSMUST00000114803.9	ENSMUSG00000007570.17	Fance	chr17	protein_coding	Fanconi anemia, complementation group E
chr17	28532726	28534573	+	28532856	28534573	A5SS	0.5	50	50	ENSMUST00000114803.9	ENSMUSG00000007570.17	Fance	chr17	protein_coding	Fanconi anemia, complementation group E
chr17	28537481	28539764	+	28537381	28539764	A5SS	0.5	50	50	ENSMUST00000114803.9	ENSMUSG00000007570.17	Fance	chr17	protein_coding	Fanconi anemia, complementation group E
chr17	28539830	28545068	+	28539830	28545126	A3SS	0.33	50	50	ENSMUST00000114801.9	ENSMUSG00000007570.17	Fance	chr17	protein_coding	Fanconi anemia, complementation group E
chr17	28542639	28545126	+	28539830	28545126	A5SS	0.33	50	50	ENSMUST00000114801.9	ENSMUSG00000007570.17	Fance	chr17	protein_coding	Fanconi anemia, complementation group E
chr17	28539830	28545068	+	28539830;28541745	28541620;28545068	ES	0.5	50	50	ENSMUST00000124870.8	ENSMUSG00000007570.17	Fance	chr17	protein_coding	Fanconi anemia, complementation group E
chr17	28539830	28545126	+	28539830	28541620	A3SS&ES	0.33	50	50	ENSMUST00000124870.8	ENSMUSG00000007570.17	Fance	chr17	protein_coding	Fanconi anemia, complementation group E
chr17	28541745	28542545	+	28541745	28545068	A3SS	0.33	50	50	ENSMUST00000124870.8	ENSMUSG00000007570.17	Fance	chr17	protein_coding	Fanconi anemia, complementation group E
chr17	28547859	28548348	+	28547859;28548021	28547941;28548348	ES	0.33	50	50	ENSMUST00000042334.16	ENSMUSG00000037805.16	Rpl10a	chr17	protein_coding	ribosomal protein L10A
chr17	28548021	28549499	+	28548021;28548496	28548348;28549499	ES	0.5	50	50	ENSMUST00000042334.16	ENSMUSG00000037805.16	Rpl10a	chr17	protein_coding	ribosomal protein L10A
chr17	28548496	28549804	+	28548496;28549671	28549499;28549804	ES	0.5	50	50	ENSMUST00000042334.16	ENSMUSG00000037805.16	Rpl10a	chr17	protein_coding	ribosomal protein L10A
chr17	28547592	28547765	+	28547592	28547785	A3SS	0.33	50	50	ENSMUST00000042334.16	ENSMUSG00000037805.16	Rpl10a	chr17	protein_coding	ribosomal protein L10A
chr17	28547592	28547788	+	28547592	28547785	A3SS	0.33	50	50	ENSMUST00000042334.16	ENSMUSG00000037805.16	Rpl10a	chr17	protein_coding	ribosomal protein L10A
chr17	28548496	28549543	+	28548496	28549499	A3SS	0.25	50	50	ENSMUST00000042334.16	ENSMUSG00000037805.16	Rpl10a	chr17	protein_coding	ribosomal protein L10A
chr17	28548496	28549568	+	28548496	28549499	A3SS	0.25	50	50	ENSMUST00000042334.16	ENSMUSG00000037805.16	Rpl10a	chr17	protein_coding	ribosomal protein L10A
chr17	28548254	28548348	+	28548021	28548348	A5SS	0.33	50	50	ENSMUST00000042334.16	ENSMUSG00000037805.16	Rpl10a	chr17	protein_coding	ribosomal protein L10A
chr17	28547592	28547765	+	28547592	28547788	A3SS	0.33	50	50	ENSMUST00000233427.2	ENSMUSG00000037805.16	Rpl10a	chr17	protein_coding	ribosomal protein L10A
chr17	28547859;28548021	28547941;28549499	+	28547859;28548496	28548348;28549499	MXE	0.5	100	100	ENSMUST00000233937.2	ENSMUSG00000037805.16	Rpl10a	chr17	protein_coding	ribosomal protein L10A
chr17	28547859;28548254	28547941;28548348	+	28547859	28548348	cassetteExon	0.5	100	100	ENSMUST00000233937.2	ENSMUSG00000037805.16	Rpl10a	chr17	protein_coding	ribosomal protein L10A
chr17	28548021;28549671	28549499;28549804	+	28548021;28548496	28548348;28549804	MXE	0.5	100	100	ENSMUST00000233895.2	ENSMUSG00000037805.16	Rpl10a	chr17	protein_coding	ribosomal protein L10A
chr17	28548496;28549671	28549543;28549804	+	28548496	28549804	cassetteExon	0.5	100	100	ENSMUST00000233895.2	ENSMUSG00000037805.16	Rpl10a	chr17	protein_coding	ribosomal protein L10A
chr17	28548496;28549671	28549568;28549804	+	28548496	28549804	cassetteExon	0.5	100	100	ENSMUST00000233895.2	ENSMUSG00000037805.16	Rpl10a	chr17	protein_coding	ribosomal protein L10A
chr17	28547859	28548348	+	28547859	28547941	A3SS	0.5	50	50	ENSMUST00000128758.9	ENSMUSG00000037805.16	Rpl10a	chr17	protein_coding	ribosomal protein L10A
chr17	28547859;28548496	28548348;28549804	+	28547859;28549671	28547941;28549804	MXE	0.5	100	100	ENSMUST00000233014.2	ENSMUSG00000037805.16	Rpl10a	chr17	protein_coding	ribosomal protein L10A
chr17	28548496	28549804	+	28548496	28549499	3pMXE	0.25	50	50	ENSMUST00000232920.2	ENSMUSG00000037805.16	Rpl10a	chr17	protein_coding	ribosomal protein L10A
chr17	28548021	28549499	+	28548496	28549499	A5SS&ES	0.5	50	50	ENSMUST00000129935.8	ENSMUSG00000037805.16	Rpl10a	chr17	protein_coding	ribosomal protein L10A
chr17	28548496	28549804	+	28548496	28549543	3pMXE	0.25	50	50	ENSMUST00000233842.2	ENSMUSG00000037805.16	Rpl10a	chr17	protein_coding	ribosomal protein L10A
chr17	28548021	28549499	+	28548021	28548348	A3SS&ES	0.5	50	50	ENSMUST00000233842.2	ENSMUSG00000037805.16	Rpl10a	chr17	protein_coding	ribosomal protein L10A
chr17	28548496	28549568	+	28548496	28549543	A3SS	0.25	50	50	ENSMUST00000233842.2	ENSMUSG00000037805.16	Rpl10a	chr17	protein_coding	ribosomal protein L10A
chr17	28548496	28549804	+	28549671	28549804	A5SS	0.5	50	50	ENSMUST00000141049.2	ENSMUSG00000037805.16	Rpl10a	chr17	protein_coding	ribosomal protein L10A
chr17	28560574	28569542	-	28560574	28568965	5pMXE	0.33	50	50	ENSMUST00000154873.9	ENSMUSG00000002249.22	Tead3	chr17	protein_coding	TEA domain family member 3
chr17	28560574	28569583	-	28560574	28568965	5pMXE	0.33	50	50	ENSMUST00000154873.9	ENSMUSG00000002249.22	Tead3	chr17	protein_coding	TEA domain family member 3
chr17	28554470;28555310	28555248;28555485	-	28554470	28555485	cassetteExon	0.5	100	100	ENSMUST00000154873.9	ENSMUSG00000002249.22	Tead3	chr17	protein_coding	TEA domain family member 3
chr17	28554470;28555310	28555248;28559128	-	28554470;28555547	28555485;28559128	MXE	0.5	100	100	ENSMUST00000154873.9	ENSMUSG00000002249.22	Tead3	chr17	protein_coding	TEA domain family member 3
chr17	28552648	28552765	-	28552653	28552765	A3SS	0.5	50	50	ENSMUST00000154873.9	ENSMUSG00000002249.22	Tead3	chr17	protein_coding	TEA domain family member 3
chr17	28560574	28569583	-	28560574	28569542	5pMXE	0.33	50	50	ENSMUST00000114799.8	ENSMUSG00000002249.22	Tead3	chr17	protein_coding	TEA domain family member 3
chr17	28555310	28559128	-	28555547	28559128	A3SS	0.5	50	50	ENSMUST00000127212.9	ENSMUSG00000002249.22	Tead3	chr17	protein_coding	TEA domain family member 3
chr17	28555310;28555547	28555485;28559128	-	28555310	28559128	cassetteExon	0.5	100	100	ENSMUST00000219703.3	ENSMUSG00000002249.22	Tead3	chr17	protein_coding	TEA domain family member 3
chr17	28554470	28555485	-	28554470	28555248	5pMXE	0.5	50	50	ENSMUST00000151557.2	ENSMUSG00000002249.22	Tead3	chr17	protein_coding	TEA domain family member 3
chr17	28554470	28555485	-	28555310	28555485	3pMXE	0.5	50	50	ENSMUST00000226172.2	ENSMUSG00000002249.22	Tead3	chr17	protein_coding	TEA domain family member 3
chr17	28555310	28559128	-	28555310	28555485	5pMXE	0.5	50	50	ENSMUST00000226172.2	ENSMUSG00000002249.22	Tead3	chr17	protein_coding	TEA domain family member 3
chr17	28570976;28572568	28572560;28572657	-	28570976	28572657	cassetteExon	0.5	100	100	ENSMUST00000130877.2	ENSMUSG00000037446.15	Tulp1	chr17	protein_coding	tubby like protein 1
chr17	28575236	28577524	-	28575236;28575424	28575313;28577524	ES	0.5	50	50	ENSMUST00000041819.14	ENSMUSG00000037446.15	Tulp1	chr17	protein_coding	tubby like protein 1
chr17	28582812	28583459	-	28582812;28583357	28583205;28583459	ES	0.5	50	50	ENSMUST00000041819.14	ENSMUSG00000037446.15	Tulp1	chr17	protein_coding	tubby like protein 1
chr17	28575424	28577423	-	28575424	28577524	A5SS	0.5	50	50	ENSMUST00000041819.14	ENSMUSG00000037446.15	Tulp1	chr17	protein_coding	tubby like protein 1
chr17	28570976	28572657	-	28572568	28572657	3pMXE	0.5	50	50	ENSMUST00000123797.8	ENSMUSG00000037446.15	Tulp1	chr17	protein_coding	tubby like protein 1
chr17	28575236	28577524	-	28575236	28575313	A5SS&ES	0.5	50	50	ENSMUST00000131604.3	ENSMUSG00000037446.15	Tulp1	chr17	protein_coding	tubby like protein 1
chr17	28582812	28583459	-	28582812	28583205	A5SS	0.5	50	50	ENSMUST00000146493.3	ENSMUSG00000037446.15	Tulp1	chr17	protein_coding	tubby like protein 1
chr17	28629567	28634843	-	28629567;28631098	28631008;28634843	ES	0.5	50	50	ENSMUST00000079413.11	ENSMUSG00000024222.18	Fkbp5	chr17	protein_coding	FK506 binding protein 5
chr17	28660027	28706879	-	28660027	28704926	5pMXE	0.25	50	50	ENSMUST00000079413.11	ENSMUSG00000024222.18	Fkbp5	chr17	protein_coding	FK506 binding protein 5
chr17	28660027	28730059	-	28660027	28704926	5pMXE	0.25	50	50	ENSMUST00000079413.11	ENSMUSG00000024222.18	Fkbp5	chr17	protein_coding	FK506 binding protein 5
chr17	28653332	28656966	-	28648337	28656966	A3SS	0.5	50	50	ENSMUST00000079413.11	ENSMUSG00000024222.18	Fkbp5	chr17	protein_coding	FK506 binding protein 5
chr17	28634999	28637369	-	28634999	28647326	A5SS	0.33	50	50	ENSMUST00000079413.11	ENSMUSG00000024222.18	Fkbp5	chr17	protein_coding	FK506 binding protein 5
chr17	28647440	28647552	-	28647440	28648195	A5SS	0.5	50	50	ENSMUST00000079413.11	ENSMUSG00000024222.18	Fkbp5	chr17	protein_coding	FK506 binding protein 5
chr17	28660027	28660514	-	28660027	28704926	A5SS	0.25	50	50	ENSMUST00000079413.11	ENSMUSG00000024222.18	Fkbp5	chr17	protein_coding	FK506 binding protein 5
chr17	28714080	28726210	-	28718392	28726210	A3SS&ES	0.5	50	50	ENSMUST00000114792.8	ENSMUSG00000024222.18	Fkbp5	chr17	protein_coding	FK506 binding protein 5
chr17	28714080	28736369	-	28726443	28736369	A3SS&ES	0.5	50	50	ENSMUST00000114792.8	ENSMUSG00000024222.18	Fkbp5	chr17	protein_coding	FK506 binding protein 5
chr17	28634999	28704926	-	28634999	28647326	A5SS&ES	0.33	50	50	ENSMUST00000114792.8	ENSMUSG00000024222.18	Fkbp5	chr17	protein_coding	FK506 binding protein 5
chr17	28660027	28660514	-	28660027	28706879	A5SS	0.25	50	50	ENSMUST00000114792.8	ENSMUSG00000024222.18	Fkbp5	chr17	protein_coding	FK506 binding protein 5
chr17	28660027	28730059	-	28660027	28706879	A5SS&ES	0.25	50	50	ENSMUST00000114792.8	ENSMUSG00000024222.18	Fkbp5	chr17	protein_coding	FK506 binding protein 5
chr17	28706977	28726163	-	28706977	28718340	A5SS&ES	0.5	50	50	ENSMUST00000114792.8	ENSMUSG00000024222.18	Fkbp5	chr17	protein_coding	FK506 binding protein 5
chr17	28660027	28660514	-	28660027	28730059	A5SS	0.25	50	50	ENSMUST00000233102.2	ENSMUSG00000024222.18	Fkbp5	chr17	protein_coding	FK506 binding protein 5
chr17	28660027	28704926	-	28634999	28704926	A3SS	0.5	50	50	ENSMUST00000233870.2	ENSMUSG00000024222.18	Fkbp5	chr17	protein_coding	FK506 binding protein 5
chr17	28634999	28637369	-	28634999	28704926	A5SS	0.33	50	50	ENSMUST00000233870.2	ENSMUSG00000024222.18	Fkbp5	chr17	protein_coding	FK506 binding protein 5
chr17	28634999	28637369	-	28625129	28637369	A3SS	0.5	50	50	ENSMUST00000233372.2	ENSMUSG00000024222.18	Fkbp5	chr17	protein_coding	FK506 binding protein 5
chr17	28714080;28726443	28726210;28736369	-	28714080	28736369	cassetteExon	0.5	100	100	ENSMUST00000233917.2	ENSMUSG00000024222.18	Fkbp5	chr17	protein_coding	FK506 binding protein 5
chr17	28756926	28757590	+	28756926	28757560	A3SS	0.5	50	50	ENSMUST00000233923.2	ENSMUSG00000024223.4	Armc12	chr17	protein_coding	armadillo repeat containing 12
chr17	28750098	28750949	+	28750020	28750949	A5SS	0.5	50	50	ENSMUST00000233923.2	ENSMUSG00000024223.4	Armc12	chr17	protein_coding	armadillo repeat containing 12
chr17	28751075	28751317	+	28751094	28751317	A5SS	0.5	50	50	ENSMUST00000233923.2	ENSMUSG00000024223.4	Armc12	chr17	protein_coding	armadillo repeat containing 12
chr17	28777414	28779545	-	28777414;28777857	28777735;28779545	ES	0.5	50	50	ENSMUST00000025062.5	ENSMUSG00000024225.6	Clps	chr17	protein_coding	colipase, pancreatic
chr17	28801999	28804174	+	28801999	28802298	3pMXE	0.5	50	50	ENSMUST00000080780.8	ENSMUSG00000062252.10	Lhfpl5	chr17	protein_coding	lipoma HMGIC fusion partner-like 5
chr17	28818843	28819843	-	28819430	28819843	A3SS	0.5	50	50	ENSMUST00000233440.2	ENSMUSG00000004865.17	Srpk1	chr17	protein_coding	serine/arginine-rich protein specific kinase 1
chr17	28839427	28840951	-	28827738	28840951	A3SS	0.33	50	50	ENSMUST00000233440.2	ENSMUSG00000004865.17	Srpk1	chr17	protein_coding	serine/arginine-rich protein specific kinase 1
chr17	28818843	28819843	-	28818843;28819430	28819217;28819843	ES	0.5	50	50	ENSMUST00000130643.9	ENSMUSG00000004865.17	Srpk1	chr17	protein_coding	serine/arginine-rich protein specific kinase 1
chr17	28824360	28825281	-	28821827	28825281	A3SS	0.5	50	50	ENSMUST00000233353.2	ENSMUSG00000004865.17	Srpk1	chr17	protein_coding	serine/arginine-rich protein specific kinase 1
chr17	28821827	28822412	-	28821827	28825281	A5SS	0.5	50	50	ENSMUST00000233353.2	ENSMUSG00000004865.17	Srpk1	chr17	protein_coding	serine/arginine-rich protein specific kinase 1
chr17	28827738	28840951	-	28819868	28840951	A3SS	0.33	50	50	ENSMUST00000233794.2	ENSMUSG00000004865.17	Srpk1	chr17	protein_coding	serine/arginine-rich protein specific kinase 1
chr17	28839427	28840951	-	28819868	28840951	A3SS	0.33	50	50	ENSMUST00000233794.2	ENSMUSG00000004865.17	Srpk1	chr17	protein_coding	serine/arginine-rich protein specific kinase 1
chr17	28819868	28821662	-	28819868	28840951	A5SS	0.5	50	50	ENSMUST00000233794.2	ENSMUSG00000004865.17	Srpk1	chr17	protein_coding	serine/arginine-rich protein specific kinase 1
chr17	28861392	28861490	-	28861347	28861490	A3SS	0.5	50	50	ENSMUST00000232805.2	ENSMUSG00000036196.17	Slc26a8	chr17	protein_coding	solute carrier family 26, member 8
chr17	28880988	28888877	-	28880988;28882702	28882538;28888877	ES	0.33	50	50	ENSMUST00000114764.8	ENSMUSG00000036196.17	Slc26a8	chr17	protein_coding	solute carrier family 26, member 8
chr17	28895177;28896982	28896923;28903681	-	28895177	28903681	cassetteExon	0.5	100	100	ENSMUST00000114764.8	ENSMUSG00000036196.17	Slc26a8	chr17	protein_coding	solute carrier family 26, member 8
chr17	28871483	28872806	-	28871499	28872806	A3SS	0.5	50	50	ENSMUST00000114764.8	ENSMUSG00000036196.17	Slc26a8	chr17	protein_coding	solute carrier family 26, member 8
chr17	28903867	28908691	-	28903876	28908691	A3SS	0.33	50	50	ENSMUST00000114764.8	ENSMUSG00000036196.17	Slc26a8	chr17	protein_coding	solute carrier family 26, member 8
chr17	28908499	28908691	-	28903876	28908691	A3SS	0.33	50	50	ENSMUST00000114764.8	ENSMUSG00000036196.17	Slc26a8	chr17	protein_coding	solute carrier family 26, member 8
chr17	28878649;28880988	28880839;28888877	-	28878649	28888877	cassetteExon	0.5	100	100	ENSMUST00000233249.2	ENSMUSG00000036196.17	Slc26a8	chr17	protein_coding	solute carrier family 26, member 8
chr17	28882702	28888877	-	28878649	28888877	A3SS	0.33	50	50	ENSMUST00000233249.2	ENSMUSG00000036196.17	Slc26a8	chr17	protein_coding	solute carrier family 26, member 8
chr17	28908499	28908691	-	28903867	28908691	A3SS	0.33	50	50	ENSMUST00000233249.2	ENSMUSG00000036196.17	Slc26a8	chr17	protein_coding	solute carrier family 26, member 8
chr17	28910829;28911774	28911730;28932748	+	28910829	28932748	cassetteExon	0.5	100	100	ENSMUST00000004990.14	ENSMUSG00000053436.16	Mapk14	chr17	protein_coding	mitogen-activated protein kinase 14
chr17	28947949;28956064	28955985;28960762	+	28947949;28959733	28959654;28960762	MXE	0.5	100	100	ENSMUST00000004990.14	ENSMUSG00000053436.16	Mapk14	chr17	protein_coding	mitogen-activated protein kinase 14
chr17	28947949;28956064	28955985;28963957	+	28947949;28960840	28959654;28963957	MXE	0.5	100	100	ENSMUST00000004990.14	ENSMUSG00000053436.16	Mapk14	chr17	protein_coding	mitogen-activated protein kinase 14
chr17	28911656	28932748	+	28910829	28932748	A5SS	0.33	50	50	ENSMUST00000004990.14	ENSMUSG00000053436.16	Mapk14	chr17	protein_coding	mitogen-activated protein kinase 14
chr17	28956064	28963957	+	28956064;28960840	28960762;28963957	ES	0.5	50	50	ENSMUST00000114754.8	ENSMUSG00000053436.16	Mapk14	chr17	protein_coding	mitogen-activated protein kinase 14
chr17	28956064;28959733	28959718;28960762	+	28956064	28960762	cassetteExon	0.5	100	100	ENSMUST00000114754.8	ENSMUSG00000053436.16	Mapk14	chr17	protein_coding	mitogen-activated protein kinase 14
chr17	28911656	28932748	+	28911774	28932748	A5SS&ES	0.33	50	50	ENSMUST00000114754.8	ENSMUSG00000053436.16	Mapk14	chr17	protein_coding	mitogen-activated protein kinase 14
chr17	28947445	28960762	+	28947445	28947878	3pMXE	0.5	50	50	ENSMUST00000124886.9	ENSMUSG00000053436.16	Mapk14	chr17	protein_coding	mitogen-activated protein kinase 14
chr17	28956064	28960762	+	28956064	28959718	3pMXE	0.33	50	50	ENSMUST00000114758.9	ENSMUSG00000053436.16	Mapk14	chr17	protein_coding	mitogen-activated protein kinase 14
chr17	28956064	28963957	+	28956064	28959718	3pMXE	0.33	50	50	ENSMUST00000114758.9	ENSMUSG00000053436.16	Mapk14	chr17	protein_coding	mitogen-activated protein kinase 14
chr17	28947949	28959654	+	28947949	28955985	A3SS&ES	0.5	50	50	ENSMUST00000114758.9	ENSMUSG00000053436.16	Mapk14	chr17	protein_coding	mitogen-activated protein kinase 14
chr17	28947445;28960840	28960762;28963957	+	28947445;28956064	28947878;28963957	MXE	0.5	100	100	ENSMUST00000233250.2	ENSMUSG00000053436.16	Mapk14	chr17	protein_coding	mitogen-activated protein kinase 14
chr17	28956064	28960762	+	28947445	28960762	A5SS	0.33	50	50	ENSMUST00000233095.2	ENSMUSG00000053436.16	Mapk14	chr17	protein_coding	mitogen-activated protein kinase 14
chr17	28956064	28963957	+	28960840	28963957	A5SS&ES	0.5	50	50	ENSMUST00000233095.2	ENSMUSG00000053436.16	Mapk14	chr17	protein_coding	mitogen-activated protein kinase 14
chr17	28959733	28960762	+	28947445	28960762	A5SS	0.33	50	50	ENSMUST00000233095.2	ENSMUSG00000053436.16	Mapk14	chr17	protein_coding	mitogen-activated protein kinase 14
chr17	28988502	28990132	+	28988502;28989114	28988985;28990132	ES	0.5	50	50	ENSMUST00000233984.2	ENSMUSG00000004864.14	Mapk13	chr17	protein_coding	mitogen-activated protein kinase 13
chr17	28994336	28995109	+	28994336;28994557	28994528;28995109	ES	0.5	50	50	ENSMUST00000233984.2	ENSMUSG00000004864.14	Mapk13	chr17	protein_coding	mitogen-activated protein kinase 13
chr17	28995390	28995444	+	28995390	28995476	A3SS	0.33	50	50	ENSMUST00000233984.2	ENSMUSG00000004864.14	Mapk13	chr17	protein_coding	mitogen-activated protein kinase 13
chr17	28995547	28997057	+	28995547	28996456	A3SS&ES	0.5	50	50	ENSMUST00000233984.2	ENSMUSG00000004864.14	Mapk13	chr17	protein_coding	mitogen-activated protein kinase 13
chr17	28988564	28988985	+	28988502	28988985	A5SS	0.5	50	50	ENSMUST00000233984.2	ENSMUSG00000004864.14	Mapk13	chr17	protein_coding	mitogen-activated protein kinase 13
chr17	28994336	28995276	+	28994336	28994528	A3SS&ES	0.33	50	50	ENSMUST00000124099.8	ENSMUSG00000004864.14	Mapk13	chr17	protein_coding	mitogen-activated protein kinase 13
chr17	28995390	28996697	+	28995390	28995476	3pMXE	0.33	50	50	ENSMUST00000233460.2	ENSMUSG00000004864.14	Mapk13	chr17	protein_coding	mitogen-activated protein kinase 13
chr17	28994336;28995156	28995109;28995276	+	28994336	28995276	cassetteExon	0.5	100	100	ENSMUST00000233460.2	ENSMUSG00000004864.14	Mapk13	chr17	protein_coding	mitogen-activated protein kinase 13
chr17	28995390	28995444	+	28995390	28996697	A3SS	0.33	50	50	ENSMUST00000129096.3	ENSMUSG00000004864.14	Mapk13	chr17	protein_coding	mitogen-activated protein kinase 13
chr17	28996535	28996697	+	28995390	28996697	A5SS	0.5	50	50	ENSMUST00000129096.3	ENSMUSG00000004864.14	Mapk13	chr17	protein_coding	mitogen-activated protein kinase 13
chr17	28988502	28990132	+	28989114	28990132	A5SS&ES	0.5	50	50	ENSMUST00000233051.2	ENSMUSG00000004864.14	Mapk13	chr17	protein_coding	mitogen-activated protein kinase 13
chr17	29043040	29050288	+	29043040;29047415	29047318;29050288	ES	0.33	50	50	ENSMUST00000004985.11	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29047415	29054736	+	29047415;29050385	29050288;29054736	ES	0.25	50	50	ENSMUST00000004985.11	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29036167	29036445	+	29036167	29036460	A3SS	0.5	50	50	ENSMUST00000004985.11	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29037612	29040040	+	29037612	29040060	A3SS	0.5	50	50	ENSMUST00000004985.11	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29047415	29050292	+	29047415	29050288	A3SS	0.33	50	50	ENSMUST00000004985.11	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29020803	29024903	+	29020335	29024903	A5SS	0.5	50	50	ENSMUST00000004985.11	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29028731	29029487	+	29026373	29029487	A5SS	0.5	50	50	ENSMUST00000004985.11	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29041737	29042947	+	29040566	29042947	A5SS	0.2	50	50	ENSMUST00000004985.11	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29042598	29042947	+	29040566	29042947	A5SS	0.2	50	50	ENSMUST00000004985.11	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29042767	29042947	+	29040566	29042947	A5SS	0.2	50	50	ENSMUST00000004985.11	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29036772	29037310	+	29036772	29042947	A3SS	0.33	50	50	ENSMUST00000233646.2	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29040566	29042947	+	29036772	29042947	A5SS	0.2	50	50	ENSMUST00000233646.2	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29040566	29054736	+	29050385	29054736	A5SS&ES	0.25	50	50	ENSMUST00000233646.2	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29041737	29042947	+	29036772	29042947	A5SS	0.2	50	50	ENSMUST00000233646.2	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29042598	29042947	+	29036772	29042947	A5SS	0.2	50	50	ENSMUST00000233646.2	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29042767	29042947	+	29036772	29042947	A5SS	0.2	50	50	ENSMUST00000233646.2	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29036772;29043040	29042947;29050288	+	29036772	29050288	cassetteExon	0.5	100	100	ENSMUST00000233561.2	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29036772;29043040	29042947;29054736	+	29036772;29050385	29050288;29054736	MXE	0.5	100	100	ENSMUST00000233561.2	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29036772;29043040	29042947;29055484	+	29036772;29054890	29050288;29055484	MXE	0.5	100	100	ENSMUST00000233561.2	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29036772	29037310	+	29036772	29050288	A3SS	0.33	50	50	ENSMUST00000233561.2	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29047415	29050288	+	29036772	29050288	A5SS	0.33	50	50	ENSMUST00000233561.2	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29047415	29054736	+	29050385	29054736	A5SS&ES	0.25	50	50	ENSMUST00000233561.2	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29047415	29054736	+	29047415;29050385	29050292;29054736	ES	0.25	50	50	ENSMUST00000233709.2	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29036772	29050288	+	29036772	29042947	A3SS&ES	0.33	50	50	ENSMUST00000233709.2	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29043040	29050288	+	29043040	29047318	A3SS&ES	0.25	50	50	ENSMUST00000233709.2	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29043040	29054736	+	29043040;29047415	29047318;29054736	ES	0.25	50	50	ENSMUST00000233701.2	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29036772;29050385	29050288;29054736	+	29036772;29047415	29037310;29054736	MXE	0.5	100	100	ENSMUST00000233701.2	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29043040;29050385	29050288;29054736	+	29043040;29047415	29047318;29054736	MXE	0.5	100	100	ENSMUST00000233701.2	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29036772;29043040	29042947;29054736	+	29036772;29040566	29037310;29054736	MXE	0.5	100	100	ENSMUST00000232705.2	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29036772;29043040	29042947;29055484	+	29036772;29054890	29037310;29055484	MXE	0.5	100	100	ENSMUST00000232705.2	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29036772;29050385	29050288;29054736	+	29036772;29040566	29037310;29054736	MXE	0.5	100	100	ENSMUST00000232705.2	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29040566;29043040	29042947;29054736	+	29040566	29054736	cassetteExon	0.5	100	100	ENSMUST00000232705.2	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29040566;29043040	29042947;29055484	+	29040566;29054890	29054736;29055484	MXE	0.5	100	100	ENSMUST00000232705.2	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29047415	29054736	+	29040566	29054736	A5SS	0.25	50	50	ENSMUST00000232705.2	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29043040;29054890	29054736;29055484	+	29043040	29055484	cassetteExon	0.5	100	100	ENSMUST00000232997.2	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29043040	29047318	+	29043040	29055484	A3SS	0.25	50	50	ENSMUST00000232997.2	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29043040	29050288	+	29043040	29055484	A3SS	0.25	50	50	ENSMUST00000232997.2	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29042598	29042947	+	29041737	29042947	A5SS	0.2	50	50	ENSMUST00000144022.9	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29042767	29042947	+	29041737	29042947	A5SS	0.2	50	50	ENSMUST00000144022.9	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29042767	29042947	+	29042598	29042947	A5SS	0.2	50	50	ENSMUST00000140587.9	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29043040;29050385	29050288;29054736	+	29043040	29054736	cassetteExon	0.5	100	100	ENSMUST00000233520.2	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29036772	29050288	+	29043040	29050288	5pMXE	0.33	50	50	ENSMUST00000140973.9	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29043040	29050288	+	29047415	29050288	5pMXE	0.33	50	50	ENSMUST00000127007.2	ENSMUSG00000063952.17	Brpf3	chr17	protein_coding	bromodomain and PHD finger containing, 3
chr17	29100602	29101433	+	29100602	29102453	A3SS	0.5	50	50	ENSMUST00000056866.8	ENSMUSG00000043286.13	Pnpla1	chr17	protein_coding	patatin-like phospholipase domain containing 1
chr17	29124469	29124614	-	29124469	29124665	A5SS	0.5	50	50	ENSMUST00000062357.6	ENSMUSG00000048905.6	Bnip5	chr17	protein_coding	BCL2 interacting protein 5
chr17	29153543	29153682	+	29144540	29153682	A5SS	0.5	50	50	ENSMUST00000148464.2	ENSMUSG00000087693.2	Gm16191	chr17	lncRNA	predicted gene 16191
chr17	29160343	29162752	-	29160343	29161171	5pMXE	0.5	50	50	ENSMUST00000051526.6	ENSMUSG00000045378.6	Pxt1	chr17	protein_coding	peroxisomal, testis specific 1
chr17	29153780;29159867	29159850;29160216	-	29153780	29160216	cassetteExon	0.5	100	100	ENSMUST00000051526.6	ENSMUSG00000045378.6	Pxt1	chr17	protein_coding	peroxisomal, testis specific 1
chr17	29181886	29182935	+	29181886;29182345	29182225;29182935	ES	0.25	50	50	ENSMUST00000153462.8	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29182345	29183948	+	29182345	29182935	3pMXE	0.5	50	50	ENSMUST00000153462.8	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29180661	29181621	+	29180661	29181784	A3SS	0.5	50	50	ENSMUST00000153462.8	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171543	29180388	+	29170997	29180388	A5SS	0.2	50	50	ENSMUST00000153462.8	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171543	29181784	+	29180661	29181784	A5SS&ES	0.25	50	50	ENSMUST00000153462.8	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171543	29182225	+	29181886	29182225	A5SS&ES	0.5	50	50	ENSMUST00000153462.8	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171543	29182935	+	29182345	29182935	A5SS&ES	0.25	50	50	ENSMUST00000153462.8	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171731	29180388	+	29170997	29180388	A5SS	0.2	50	50	ENSMUST00000153462.8	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29172317	29180388	+	29170997	29180388	A5SS	0.2	50	50	ENSMUST00000153462.8	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29177031	29180388	+	29170997	29180388	A5SS	0.2	50	50	ENSMUST00000153462.8	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29177031	29181784	+	29180661	29181784	A5SS&ES	0.25	50	50	ENSMUST00000153462.8	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29177031	29182935	+	29182345	29182935	A5SS&ES	0.25	50	50	ENSMUST00000153462.8	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29180614	29181784	+	29180661	29181784	A5SS	0.25	50	50	ENSMUST00000153462.8	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171543	29181784	+	29171543;29177031	29176853;29181784	ES	0.25	50	50	ENSMUST00000233145.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29182345	29183948	+	29182345;29183132	29182935;29183948	ES	0.5	50	50	ENSMUST00000233145.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171543;29180614	29180388;29181784	+	29171543;29177031	29176853;29181784	MXE	0.5	100	100	ENSMUST00000233145.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171543;29180661	29180388;29181784	+	29171543;29177031	29176853;29181784	MXE	0.5	100	100	ENSMUST00000233145.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29177031;29180614	29180388;29181784	+	29177031	29181784	cassetteExon	0.5	100	100	ENSMUST00000233145.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29177031;29180661	29180388;29181784	+	29177031	29181784	cassetteExon	0.5	100	100	ENSMUST00000233145.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171731	29176853	+	29171543	29176853	A5SS	0.33	50	50	ENSMUST00000233145.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29172317	29176853	+	29171543	29176853	A5SS	0.33	50	50	ENSMUST00000233145.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171543	29180388	+	29171543;29177031	29176853;29180388	ES	0.25	50	50	ENSMUST00000233197.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171731	29180388	+	29177031	29180388	A5SS&ES	0.25	50	50	ENSMUST00000233197.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29172317	29180388	+	29177031	29180388	A5SS&ES	0.25	50	50	ENSMUST00000233197.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171543	29181784	+	29171543;29180661	29180388;29181784	ES	0.25	50	50	ENSMUST00000118762.9	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171543;29177031	29176853;29182935	+	29171543;29182345	29180388;29182935	MXE	0.5	100	100	ENSMUST00000118762.9	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171731	29180388	+	29171543	29180388	A5SS	0.2	50	50	ENSMUST00000118762.9	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29172317	29180388	+	29171543	29180388	A5SS	0.2	50	50	ENSMUST00000118762.9	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171543	29181784	+	29171543;29180614	29180388;29181784	ES	0.25	50	50	ENSMUST00000232729.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29181886	29182935	+	29181886	29182225	3pMXE	0.5	50	50	ENSMUST00000232729.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29177031	29182935	+	29177031;29181886	29181784;29182935	ES	0.25	50	50	ENSMUST00000233847.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171543;29182345	29182225;29182935	+	29171543;29181886	29176853;29182935	MXE	0.5	100	100	ENSMUST00000233847.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171543;29182345	29182225;29183948	+	29171543;29183132	29176853;29183948	MXE	0.5	100	100	ENSMUST00000233847.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29181886;29182345	29182225;29183948	+	29181886;29183132	29182935;29183948	MXE	0.5	100	100	ENSMUST00000233847.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171543	29181784	+	29171543	29176853	A3SS&ES	0.2	50	50	ENSMUST00000122163.9	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29177031	29181784	+	29177031	29180388	A3SS&ES	0.33	50	50	ENSMUST00000122163.9	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171543;29183132	29182935;29183948	+	29171543;29182345	29176853;29183948	MXE	0.5	100	100	ENSMUST00000057174.16	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29177031;29183132	29182935;29183948	+	29177031;29182345	29180388;29183948	MXE	0.5	100	100	ENSMUST00000057174.16	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171543	29182225	+	29171543;29181886	29181784;29182225	ES	0.5	50	50	ENSMUST00000232874.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171543;29177031	29176853;29182935	+	29171543;29182345	29181784;29182935	MXE	0.5	100	100	ENSMUST00000232874.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171543	29182935	+	29171543;29177031	29176853;29182935	ES	0.25	50	50	ENSMUST00000232772.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171543;29181886	29181784;29182935	+	29171543;29177031	29176853;29182935	MXE	0.5	100	100	ENSMUST00000232772.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171543;29182345	29182225;29182935	+	29171543;29177031	29176853;29182935	MXE	0.5	100	100	ENSMUST00000232772.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171543	29180388	+	29171543	29176853	A3SS&ES	0.2	50	50	ENSMUST00000232772.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29177031	29180388	+	29177031	29182935	A3SS	0.33	50	50	ENSMUST00000232772.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171543;29181886	29181784;29182935	+	29171543	29182935	cassetteExon	0.5	100	100	ENSMUST00000233334.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171543;29182345	29182225;29182935	+	29171543	29182935	cassetteExon	0.5	100	100	ENSMUST00000233334.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171543;29182345	29182225;29183948	+	29171543;29183132	29182935;29183948	MXE	0.5	100	100	ENSMUST00000233334.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171543	29180388	+	29171543	29182935	A3SS	0.2	50	50	ENSMUST00000233334.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171543;29181886	29181784;29182935	+	29171543;29182345	29182225;29182935	MXE	0.5	100	100	ENSMUST00000150858.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171543	29180388	+	29171543	29182225	A3SS	0.2	50	50	ENSMUST00000150858.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171731	29180388	+	29171731;29177031	29176853;29180388	ES	0.33	50	50	ENSMUST00000233064.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29172317	29176853	+	29171731	29176853	A5SS	0.33	50	50	ENSMUST00000233064.2	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171731;29177031	29176853;29181784	+	29171731;29180661	29180388;29181784	MXE	0.5	100	100	ENSMUST00000117672.9	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29171731;29177031	29176853;29182935	+	29171731;29182345	29180388;29182935	MXE	0.5	100	100	ENSMUST00000117672.9	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29172317	29180388	+	29171731	29180388	A5SS	0.2	50	50	ENSMUST00000117672.9	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29172317;29177031	29176853;29180388	+	29172317	29180388	cassetteExon	0.5	100	100	ENSMUST00000153831.9	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29172317;29177031	29176853;29181784	+	29172317;29180661	29180388;29181784	MXE	0.5	100	100	ENSMUST00000153831.9	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29172317;29177031	29176853;29182935	+	29172317;29182345	29180388;29182935	MXE	0.5	100	100	ENSMUST00000153831.9	ENSMUSG00000005936.20	Kctd20	chr17	protein_coding	potassium channel tetramerisation domain containing 20
chr17	29201160	29207152	-	29201160;29203174	29203051;29207152	ES	0.5	50	50	ENSMUST00000009138.13	ENSMUSG00000024006.18	Stk38	chr17	protein_coding	serine/threonine kinase 38
chr17	29211442;29217868	29217766;29218983	-	29211442	29218983	cassetteExon	0.5	100	100	ENSMUST00000009138.13	ENSMUSG00000024006.18	Stk38	chr17	protein_coding	serine/threonine kinase 38
chr17	29190831	29192019	-	29191650	29192019	A3SS	0.5	50	50	ENSMUST00000009138.13	ENSMUSG00000024006.18	Stk38	chr17	protein_coding	serine/threonine kinase 38
chr17	29196567	29198177	-	29196575	29198177	A3SS	0.5	50	50	ENSMUST00000009138.13	ENSMUSG00000024006.18	Stk38	chr17	protein_coding	serine/threonine kinase 38
chr17	29199496	29201006	-	29198279	29201006	A3SS	0.5	50	50	ENSMUST00000009138.13	ENSMUSG00000024006.18	Stk38	chr17	protein_coding	serine/threonine kinase 38
chr17	29219118	29226685	-	29219115	29226685	A3SS	0.5	50	50	ENSMUST00000009138.13	ENSMUSG00000024006.18	Stk38	chr17	protein_coding	serine/threonine kinase 38
chr17	29198279	29198588	-	29198279	29201006	A5SS	0.33	50	50	ENSMUST00000009138.13	ENSMUSG00000024006.18	Stk38	chr17	protein_coding	serine/threonine kinase 38
chr17	29198279	29198694	-	29198279	29201006	A5SS	0.33	50	50	ENSMUST00000009138.13	ENSMUSG00000024006.18	Stk38	chr17	protein_coding	serine/threonine kinase 38
chr17	29219118	29226382	-	29219118	29226685	A5SS	0.5	50	50	ENSMUST00000119274.3	ENSMUSG00000024006.18	Stk38	chr17	protein_coding	serine/threonine kinase 38
chr17	29198279	29198588	-	29198279	29198694	A5SS	0.33	50	50	ENSMUST00000125070.9	ENSMUSG00000024006.18	Stk38	chr17	protein_coding	serine/threonine kinase 38
chr17	29207235	29218983	-	29207235	29210272	5pMXE	0.5	50	50	ENSMUST00000233864.2	ENSMUSG00000024006.18	Stk38	chr17	protein_coding	serine/threonine kinase 38
chr17	29211442	29218983	-	29207235	29218983	A3SS	0.33	50	50	ENSMUST00000233510.2	ENSMUSG00000024006.18	Stk38	chr17	protein_coding	serine/threonine kinase 38
chr17	29217868	29218983	-	29207235	29218983	A3SS	0.33	50	50	ENSMUST00000233510.2	ENSMUSG00000024006.18	Stk38	chr17	protein_coding	serine/threonine kinase 38
chr17	29201160	29207152	-	29203174	29207152	3pMXE	0.5	50	50	ENSMUST00000144516.9	ENSMUSG00000024006.18	Stk38	chr17	protein_coding	serine/threonine kinase 38
chr17	29251760	29257464	+	29251760;29255422	29255215;29257464	ES	0.5	50	50	ENSMUST00000130216.3	ENSMUSG00000071172.14	Srsf3	chr17	protein_coding	serine and arginine-rich splicing factor 3
chr17	29257598;29258883	29258428;29259749	+	29257598	29259749	cassetteExon	0.5	100	100	ENSMUST00000130216.3	ENSMUSG00000071172.14	Srsf3	chr17	protein_coding	serine and arginine-rich splicing factor 3
chr17	29255422	29257448	+	29255422	29257464	A3SS	0.5	50	50	ENSMUST00000130216.3	ENSMUSG00000071172.14	Srsf3	chr17	protein_coding	serine and arginine-rich splicing factor 3
chr17	29259787	29260367	+	29259787	29260181	A3SS&ES	0.5	50	50	ENSMUST00000130216.3	ENSMUSG00000071172.14	Srsf3	chr17	protein_coding	serine and arginine-rich splicing factor 3
chr17	29258883	29259640	+	29258883	29259749	A3SS	0.5	50	50	ENSMUST00000037776.16	ENSMUSG00000071172.14	Srsf3	chr17	protein_coding	serine and arginine-rich splicing factor 3
chr17	29251760	29257464	+	29251760	29255215	A3SS&ES	0.5	50	50	ENSMUST00000233209.2	ENSMUSG00000071172.14	Srsf3	chr17	protein_coding	serine and arginine-rich splicing factor 3
chr17	29251760	29257464	+	29255422	29257464	5pMXE	0.5	50	50	ENSMUST00000144551.2	ENSMUSG00000071172.14	Srsf3	chr17	protein_coding	serine and arginine-rich splicing factor 3
chr17	29257598	29259749	+	29257598	29258428	3pMXE	0.5	50	50	ENSMUST00000144551.2	ENSMUSG00000071172.14	Srsf3	chr17	protein_coding	serine and arginine-rich splicing factor 3
chr17	29257598	29259749	+	29258883	29259749	5pMXE	0.5	50	50	ENSMUST00000233105.2	ENSMUSG00000071172.14	Srsf3	chr17	protein_coding	serine and arginine-rich splicing factor 3
chr17	29273213	29275357	+	29272588	29275357	A5SS	0.25	50	50	ENSMUST00000233185.2	ENSMUSG00000117007.2	Gm41556	chr17	lncRNA	predicted gene, 41556
chr17	29273823	29275357	+	29272588	29275357	A5SS	0.25	50	50	ENSMUST00000233185.2	ENSMUSG00000117007.2	Gm41556	chr17	lncRNA	predicted gene, 41556
chr17	29273837	29275357	+	29272588	29275357	A5SS	0.25	50	50	ENSMUST00000233185.2	ENSMUSG00000117007.2	Gm41556	chr17	lncRNA	predicted gene, 41556
chr17	29276932	29277819	+	29275413	29277819	A5SS	0.25	50	50	ENSMUST00000233185.2	ENSMUSG00000117007.2	Gm41556	chr17	lncRNA	predicted gene, 41556
chr17	29277009	29277819	+	29275413	29277819	A5SS	0.25	50	50	ENSMUST00000233185.2	ENSMUSG00000117007.2	Gm41556	chr17	lncRNA	predicted gene, 41556
chr17	29277351	29277819	+	29275413	29277819	A5SS	0.25	50	50	ENSMUST00000233185.2	ENSMUSG00000117007.2	Gm41556	chr17	lncRNA	predicted gene, 41556
chr17	29273823	29275357	+	29273213	29275357	A5SS	0.25	50	50	ENSMUST00000233914.2	ENSMUSG00000117007.2	Gm41556	chr17	lncRNA	predicted gene, 41556
chr17	29273837	29275357	+	29273213	29275357	A5SS	0.25	50	50	ENSMUST00000233914.2	ENSMUSG00000117007.2	Gm41556	chr17	lncRNA	predicted gene, 41556
chr17	29273837	29275357	+	29273823	29275357	A5SS	0.25	50	50	ENSMUST00000232746.2	ENSMUSG00000117007.2	Gm41556	chr17	lncRNA	predicted gene, 41556
chr17	29277009	29277819	+	29276932	29277819	A5SS	0.33	50	50	ENSMUST00000233006.2	ENSMUSG00000117007.2	Gm41556	chr17	lncRNA	predicted gene, 41556
chr17	29277351	29277819	+	29276932	29277819	A5SS	0.33	50	50	ENSMUST00000233006.2	ENSMUSG00000117007.2	Gm41556	chr17	lncRNA	predicted gene, 41556
chr17	29277351	29277819	+	29277009	29277819	A5SS	0.25	50	50	ENSMUST00000233640.2	ENSMUSG00000117007.2	Gm41556	chr17	lncRNA	predicted gene, 41556
chr17	29279332	29291226	-	29279332	29297865	A5SS	0.14	50	50	ENSMUST00000133221.3	ENSMUSG00000085912.3	Trp53cor1	chr17	lncRNA	tumor protein p53 pathway corepressor 1
chr17	29279332	29291605	-	29279332	29297865	A5SS	0.14	50	50	ENSMUST00000133221.3	ENSMUSG00000085912.3	Trp53cor1	chr17	lncRNA	tumor protein p53 pathway corepressor 1
chr17	29279332	29291645	-	29279332	29297865	A5SS	0.14	50	50	ENSMUST00000133221.3	ENSMUSG00000085912.3	Trp53cor1	chr17	lncRNA	tumor protein p53 pathway corepressor 1
chr17	29279332	29291694	-	29279332	29297865	A5SS	0.14	50	50	ENSMUST00000133221.3	ENSMUSG00000085912.3	Trp53cor1	chr17	lncRNA	tumor protein p53 pathway corepressor 1
chr17	29279332	29291797	-	29279332	29297865	A5SS	0.14	50	50	ENSMUST00000133221.3	ENSMUSG00000085912.3	Trp53cor1	chr17	lncRNA	tumor protein p53 pathway corepressor 1
chr17	29279332	29292626	-	29279332	29297865	A5SS	0.14	50	50	ENSMUST00000133221.3	ENSMUSG00000085912.3	Trp53cor1	chr17	lncRNA	tumor protein p53 pathway corepressor 1
chr17	29279332	29291797	-	29279332	29291645	5pMXE	0.14	50	50	ENSMUST00000233478.2	ENSMUSG00000085912.3	Trp53cor1	chr17	lncRNA	tumor protein p53 pathway corepressor 1
chr17	29279332	29292626	-	29279332	29291645	5pMXE	0.14	50	50	ENSMUST00000233478.2	ENSMUSG00000085912.3	Trp53cor1	chr17	lncRNA	tumor protein p53 pathway corepressor 1
chr17	29279332	29291226	-	29279332	29291645	A5SS	0.14	50	50	ENSMUST00000233478.2	ENSMUSG00000085912.3	Trp53cor1	chr17	lncRNA	tumor protein p53 pathway corepressor 1
chr17	29279332	29291605	-	29279332	29291645	A5SS	0.14	50	50	ENSMUST00000233478.2	ENSMUSG00000085912.3	Trp53cor1	chr17	lncRNA	tumor protein p53 pathway corepressor 1
chr17	29279332	29291694	-	29279332	29291645	A5SS	0.14	50	50	ENSMUST00000233478.2	ENSMUSG00000085912.3	Trp53cor1	chr17	lncRNA	tumor protein p53 pathway corepressor 1
chr17	29279332	29292626	-	29279332	29291797	5pMXE	0.14	50	50	ENSMUST00000232704.2	ENSMUSG00000085912.3	Trp53cor1	chr17	lncRNA	tumor protein p53 pathway corepressor 1
chr17	29279332	29291226	-	29279332	29291797	A5SS	0.14	50	50	ENSMUST00000232704.2	ENSMUSG00000085912.3	Trp53cor1	chr17	lncRNA	tumor protein p53 pathway corepressor 1
chr17	29279332	29291605	-	29279332	29291797	A5SS	0.14	50	50	ENSMUST00000232704.2	ENSMUSG00000085912.3	Trp53cor1	chr17	lncRNA	tumor protein p53 pathway corepressor 1
chr17	29279332	29291694	-	29279332	29291797	A5SS	0.14	50	50	ENSMUST00000232704.2	ENSMUSG00000085912.3	Trp53cor1	chr17	lncRNA	tumor protein p53 pathway corepressor 1
chr17	29279332	29292626	-	29279332	29291694	5pMXE	0.14	50	50	ENSMUST00000233135.2	ENSMUSG00000085912.3	Trp53cor1	chr17	lncRNA	tumor protein p53 pathway corepressor 1
chr17	29279332	29291226	-	29279332	29291694	A5SS	0.14	50	50	ENSMUST00000233135.2	ENSMUSG00000085912.3	Trp53cor1	chr17	lncRNA	tumor protein p53 pathway corepressor 1
chr17	29279332	29291605	-	29279332	29291694	A5SS	0.14	50	50	ENSMUST00000233135.2	ENSMUSG00000085912.3	Trp53cor1	chr17	lncRNA	tumor protein p53 pathway corepressor 1
chr17	29279332	29291226	-	29279332	29292626	A5SS	0.14	50	50	ENSMUST00000232856.2	ENSMUSG00000085912.3	Trp53cor1	chr17	lncRNA	tumor protein p53 pathway corepressor 1
chr17	29279332	29291605	-	29279332	29292626	A5SS	0.14	50	50	ENSMUST00000232856.2	ENSMUSG00000085912.3	Trp53cor1	chr17	lncRNA	tumor protein p53 pathway corepressor 1
chr17	29279332	29291226	-	29279332	29291605	A5SS	0.14	50	50	ENSMUST00000233178.2	ENSMUSG00000085912.3	Trp53cor1	chr17	lncRNA	tumor protein p53 pathway corepressor 1
chr17	29312835	29317371	+	29310075	29317371	A5SS	0.5	50	50	ENSMUST00000119901.9	ENSMUSG00000023067.15	Cdkn1a	chr17	protein_coding	cyclin-dependent kinase inhibitor 1A (P21)
chr17	29340034	29352612	+	29340034;29350546	29350438;29352612	ES	0.5	50	50	ENSMUST00000233717.2	ENSMUSG00000064147.8	Rab44	chr17	protein_coding	RAB44, member RAS oncogene family
chr17	29333209;29334184	29334045;29339816	+	29333209	29339816	cassetteExon	0.5	100	100	ENSMUST00000233717.2	ENSMUSG00000064147.8	Rab44	chr17	protein_coding	RAB44, member RAS oncogene family
chr17	29383694	29388379	-	29383694;29385753	29385692;29388379	ES	0.5	50	50	ENSMUST00000024805.15	ENSMUSG00000024008.17	Cpne5	chr17	protein_coding	copine V
chr17	29421542;29421879	29421829;29423663	-	29421542	29423663	cassetteExon	0.5	100	100	ENSMUST00000024805.15	ENSMUSG00000024008.17	Cpne5	chr17	protein_coding	copine V
chr17	29378214	29378325	-	29378214	29378926	A5SS	0.5	50	50	ENSMUST00000024805.15	ENSMUSG00000024008.17	Cpne5	chr17	protein_coding	copine V
chr17	29395177	29395406	-	29395177	29402897	A5SS	0.33	50	50	ENSMUST00000024805.15	ENSMUSG00000024008.17	Cpne5	chr17	protein_coding	copine V
chr17	29395177	29395460	-	29395177	29402897	A5SS	0.33	50	50	ENSMUST00000024805.15	ENSMUSG00000024008.17	Cpne5	chr17	protein_coding	copine V
chr17	29395177	29395406	-	29395177	29395460	A5SS	0.33	50	50	ENSMUST00000234042.2	ENSMUSG00000024008.17	Cpne5	chr17	protein_coding	copine V
chr17	29480374	29480711	-	29471292	29480711	A3SS	0.5	50	50	ENSMUST00000024802.10	ENSMUSG00000024007.16	Ppil1	chr17	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 1
chr17	29481146	29482846	-	29480865	29482846	A3SS	0.5	50	50	ENSMUST00000024802.10	ENSMUSG00000024007.16	Ppil1	chr17	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 1
chr17	29470699	29470817	-	29470699	29471224	A5SS	0.5	50	50	ENSMUST00000024802.10	ENSMUSG00000024007.16	Ppil1	chr17	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 1
chr17	29471292	29471528	-	29471292	29480711	A5SS	0.25	50	50	ENSMUST00000024802.10	ENSMUSG00000024007.16	Ppil1	chr17	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 1
chr17	29471292	29471532	-	29471292	29480711	A5SS	0.25	50	50	ENSMUST00000024802.10	ENSMUSG00000024007.16	Ppil1	chr17	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 1
chr17	29471292	29475718	-	29471292	29480711	A5SS	0.25	50	50	ENSMUST00000024802.10	ENSMUSG00000024007.16	Ppil1	chr17	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 1
chr17	29471292	29475718	-	29471292	29471528	5pMXE	0.25	50	50	ENSMUST00000234880.2	ENSMUSG00000024007.16	Ppil1	chr17	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 1
chr17	29471292	29471532	-	29471292	29471528	A5SS	0.25	50	50	ENSMUST00000234880.2	ENSMUSG00000024007.16	Ppil1	chr17	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 1
chr17	29471292	29475718	-	29471292	29471532	5pMXE	0.25	50	50	ENSMUST00000234139.2	ENSMUSG00000024007.16	Ppil1	chr17	protein_coding	peptidylprolyl isomerase (cyclophilin)-like 1
chr17	29487976	29501034	+	29487976;29496921	29496831;29501034	ES	0.33	50	50	ENSMUST00000064709.13	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29501241	29512981	+	29501241;29501865	29501652;29512981	ES	0.33	50	50	ENSMUST00000064709.13	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29515663	29520330	+	29515663;29517739	29517616;29520330	ES	0.5	50	50	ENSMUST00000064709.13	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29487976;29496562	29496170;29496831	+	29487976	29496831	cassetteExon	0.5	100	100	ENSMUST00000064709.13	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29487976;29496562	29496468;29496831	+	29487976	29496831	cassetteExon	0.5	100	100	ENSMUST00000064709.13	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29487976	29496713	+	29487976	29496831	A3SS	0.16	50	50	ENSMUST00000064709.13	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29501241	29501703	+	29501241	29501652	A3SS	0.25	50	50	ENSMUST00000064709.13	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29501241	29501711	+	29501241	29501652	A3SS	0.25	50	50	ENSMUST00000064709.13	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29513388	29515537	+	29513388	29515534	A3SS	0.5	50	50	ENSMUST00000064709.13	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29517739	29520213	+	29517739	29520330	A3SS	0.5	50	50	ENSMUST00000064709.13	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29488477	29496831	+	29487976	29496831	A5SS	0.14	50	50	ENSMUST00000064709.13	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29488477	29501034	+	29496921	29501034	A5SS&ES	0.33	50	50	ENSMUST00000064709.13	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29488829	29496831	+	29487976	29496831	A5SS	0.14	50	50	ENSMUST00000064709.13	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29492382	29496831	+	29487976	29496831	A5SS	0.14	50	50	ENSMUST00000064709.13	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29492418	29496831	+	29487976	29496831	A5SS	0.14	50	50	ENSMUST00000064709.13	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29493247	29496831	+	29487976	29496831	A5SS	0.14	50	50	ENSMUST00000064709.13	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29487976;29496921	29496468;29501034	+	29487976	29501034	cassetteExon	0.5	100	100	ENSMUST00000234711.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29487976;29496921	29496713;29501034	+	29487976	29501034	cassetteExon	0.5	100	100	ENSMUST00000234711.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29487976	29496170	+	29487976	29501034	A3SS	0.16	50	50	ENSMUST00000234711.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29488477	29501034	+	29487976	29501034	A5SS	0.33	50	50	ENSMUST00000234711.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29501241	29512981	+	29501241;29501865	29501711;29512981	ES	0.33	50	50	ENSMUST00000234631.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29501241	29501703	+	29501241	29501711	A3SS	0.25	50	50	ENSMUST00000234631.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29487976	29496170	+	29487976	29496713	A3SS	0.16	50	50	ENSMUST00000234845.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29487976	29496468	+	29487976	29496713	A3SS	0.16	50	50	ENSMUST00000234845.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29501241	29512981	+	29501241	29501711	3pMXE	0.25	50	50	ENSMUST00000234054.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29501241;29501865	29501703;29512981	+	29501241	29512981	cassetteExon	0.5	100	100	ENSMUST00000235114.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29487976	29496170	+	29487976	29496468	A3SS	0.16	50	50	ENSMUST00000235038.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29488477	29496831	+	29496562	29496831	A5SS&ES	0.14	50	50	ENSMUST00000235038.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29488829	29496831	+	29496562	29496831	A5SS&ES	0.14	50	50	ENSMUST00000235038.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29492382	29496831	+	29496562	29496831	A5SS&ES	0.14	50	50	ENSMUST00000235038.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29492418	29496831	+	29496562	29496831	A5SS&ES	0.14	50	50	ENSMUST00000235038.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29493247	29496468	+	29487976	29496468	A5SS	0.5	50	50	ENSMUST00000235038.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29493247	29496831	+	29496562	29496831	A5SS&ES	0.14	50	50	ENSMUST00000235038.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29487976;29501241	29501034;29512981	+	29487976	29512981	cassetteExon	0.5	100	100	ENSMUST00000235050.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29487976	29496170	+	29487976	29512981	A3SS	0.16	50	50	ENSMUST00000235050.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29487976	29496468	+	29487976	29512981	A3SS	0.16	50	50	ENSMUST00000235050.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29487976	29496713	+	29487976	29512981	A3SS	0.16	50	50	ENSMUST00000235050.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29487976	29496831	+	29487976	29512981	A3SS	0.16	50	50	ENSMUST00000235050.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29501865	29512981	+	29487976	29512981	A5SS	0.33	50	50	ENSMUST00000235050.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29515663	29520330	+	29515663	29517616	A3SS&ES	0.5	50	50	ENSMUST00000234377.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29501241	29512981	+	29501241	29501652	3pMXE	0.25	50	50	ENSMUST00000235074.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29488477	29501034	+	29488477;29496921	29496831;29501034	ES	0.5	50	50	ENSMUST00000234256.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29488829	29496831	+	29488477	29496831	A5SS	0.14	50	50	ENSMUST00000234256.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29492382	29496831	+	29488477	29496831	A5SS	0.14	50	50	ENSMUST00000234256.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29492418	29496831	+	29488477	29496831	A5SS	0.14	50	50	ENSMUST00000234256.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29493247	29496831	+	29488477	29496831	A5SS	0.14	50	50	ENSMUST00000234256.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29492382	29496831	+	29488829	29496831	A5SS	0.14	50	50	ENSMUST00000234773.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29492418	29496831	+	29488829	29496831	A5SS	0.14	50	50	ENSMUST00000234773.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29493247	29496831	+	29488829	29496831	A5SS	0.14	50	50	ENSMUST00000234773.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29492418	29496831	+	29492382	29496831	A5SS	0.14	50	50	ENSMUST00000234820.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29493247	29496831	+	29492382	29496831	A5SS	0.14	50	50	ENSMUST00000234820.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29493247	29496831	+	29492418	29496831	A5SS	0.14	50	50	ENSMUST00000235023.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29493247;29496562	29496468;29496831	+	29493247	29496831	cassetteExon	0.5	100	100	ENSMUST00000149405.4	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29487976	29501034	+	29496921	29501034	5pMXE	0.33	50	50	ENSMUST00000234714.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29515663	29520330	+	29517739	29520330	5pMXE	0.5	50	50	ENSMUST00000150874.2	ENSMUSG00000052712.18	BC004004	chr17	protein_coding	cDNA sequence BC004004
chr17	29545336	29546812	+	29545336;29545920	29545822;29546812	ES	0.33	50	50	ENSMUST00000234782.2	ENSMUSG00000024011.18	Pi16	chr17	protein_coding	peptidase inhibitor 16
chr17	29538332	29541160	+	29538365	29541160	A5SS	0.5	50	50	ENSMUST00000234782.2	ENSMUSG00000024011.18	Pi16	chr17	protein_coding	peptidase inhibitor 16
chr17	29546607	29546812	+	29545920	29546812	A5SS	0.33	50	50	ENSMUST00000234782.2	ENSMUSG00000024011.18	Pi16	chr17	protein_coding	peptidase inhibitor 16
chr17	29545336	29546812	+	29545336;29546607	29545822;29546812	ES	0.33	50	50	ENSMUST00000114701.10	ENSMUSG00000024011.18	Pi16	chr17	protein_coding	peptidase inhibitor 16
chr17	29546607	29546812	+	29545336	29546812	A5SS	0.33	50	50	ENSMUST00000155348.3	ENSMUSG00000024011.18	Pi16	chr17	protein_coding	peptidase inhibitor 16
chr17	29559871	29566441	-	29559871;29561881	29561797;29566441	ES	0.5	50	50	ENSMUST00000095427.12	ENSMUSG00000024012.19	Mtch1	chr17	protein_coding	mitochondrial carrier 1
chr17	29559871;29560175	29560039;29561797	-	29559871	29561797	cassetteExon	0.5	100	100	ENSMUST00000095427.12	ENSMUSG00000024012.19	Mtch1	chr17	protein_coding	mitochondrial carrier 1
chr17	29552979	29555192	-	29552979	29555141	A5SS	0.5	50	50	ENSMUST00000095427.12	ENSMUSG00000024012.19	Mtch1	chr17	protein_coding	mitochondrial carrier 1
chr17	29561881	29565555	-	29561881	29566441	A5SS	0.33	50	50	ENSMUST00000095427.12	ENSMUSG00000024012.19	Mtch1	chr17	protein_coding	mitochondrial carrier 1
chr17	29561881	29566095	-	29561881	29566441	A5SS	0.33	50	50	ENSMUST00000095427.12	ENSMUSG00000024012.19	Mtch1	chr17	protein_coding	mitochondrial carrier 1
chr17	29551212	29551635	-	29551231	29551635	A3SS	0.33	50	50	ENSMUST00000234970.2	ENSMUSG00000024012.19	Mtch1	chr17	protein_coding	mitochondrial carrier 1
chr17	29551253	29551635	-	29551231	29551635	A3SS	0.33	50	50	ENSMUST00000234970.2	ENSMUSG00000024012.19	Mtch1	chr17	protein_coding	mitochondrial carrier 1
chr17	29561881	29565555	-	29561881	29566095	A5SS	0.33	50	50	ENSMUST00000234507.2	ENSMUSG00000024012.19	Mtch1	chr17	protein_coding	mitochondrial carrier 1
chr17	29551253	29551635	-	29551212	29551635	A3SS	0.33	50	50	ENSMUST00000235021.2	ENSMUSG00000024012.19	Mtch1	chr17	protein_coding	mitochondrial carrier 1
chr17	29559871	29566441	-	29559871	29561882	5pMXE	0.25	50	50	ENSMUST00000234868.2	ENSMUSG00000024012.19	Mtch1	chr17	protein_coding	mitochondrial carrier 1
chr17	29559871	29560039	-	29559871	29561882	A5SS	0.25	50	50	ENSMUST00000234868.2	ENSMUSG00000024012.19	Mtch1	chr17	protein_coding	mitochondrial carrier 1
chr17	29559871	29561797	-	29559871	29561882	A5SS	0.25	50	50	ENSMUST00000234868.2	ENSMUSG00000024012.19	Mtch1	chr17	protein_coding	mitochondrial carrier 1
chr17	29559871	29560039	-	29559871	29566441	A5SS	0.25	50	50	ENSMUST00000234180.2	ENSMUSG00000024012.19	Mtch1	chr17	protein_coding	mitochondrial carrier 1
chr17	29580131	29583885	+	29580131;29582916	29582685;29583885	ES	0.5	50	50	ENSMUST00000024810.8	ENSMUSG00000024013.16	Fgd2	chr17	protein_coding	FYVE, RhoGEF and PH domain containing 2
chr17	29584584	29585979	+	29584584	29585945	A3SS	0.5	50	50	ENSMUST00000024810.8	ENSMUSG00000024013.16	Fgd2	chr17	protein_coding	FYVE, RhoGEF and PH domain containing 2
chr17	29586101	29586250	+	29586101	29586245	A3SS	0.5	50	50	ENSMUST00000024810.8	ENSMUSG00000024013.16	Fgd2	chr17	protein_coding	FYVE, RhoGEF and PH domain containing 2
chr17	29586953	29587097	+	29586953	29587158	A3SS	0.5	50	50	ENSMUST00000024810.8	ENSMUSG00000024013.16	Fgd2	chr17	protein_coding	FYVE, RhoGEF and PH domain containing 2
chr17	29595699	29595802	+	29593952	29595802	A5SS	0.5	50	50	ENSMUST00000024810.8	ENSMUSG00000024013.16	Fgd2	chr17	protein_coding	FYVE, RhoGEF and PH domain containing 2
chr17	29684514	29684797	+	29684514	29684768	A3SS	0.5	50	50	ENSMUST00000234231.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29653867	29684250	+	29651850	29684250	A5SS	0.14	50	50	ENSMUST00000234231.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29653867	29684402	+	29684277	29684402	A5SS&ES	0.16	50	50	ENSMUST00000234231.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29653867	29684768	+	29684514	29684768	A5SS&ES	0.33	50	50	ENSMUST00000234231.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29658385	29684250	+	29651850	29684250	A5SS	0.14	50	50	ENSMUST00000234231.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29658385	29684402	+	29684277	29684402	A5SS&ES	0.16	50	50	ENSMUST00000234231.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29658385	29684768	+	29684514	29684768	A5SS&ES	0.33	50	50	ENSMUST00000234231.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29664918	29684250	+	29651850	29684250	A5SS	0.14	50	50	ENSMUST00000234231.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29677131	29684250	+	29651850	29684250	A5SS	0.14	50	50	ENSMUST00000234231.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29677131	29684402	+	29684277	29684402	A5SS&ES	0.16	50	50	ENSMUST00000234231.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29677672	29684250	+	29651850	29684250	A5SS	0.14	50	50	ENSMUST00000234231.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29684098	29684250	+	29651850	29684250	A5SS	0.14	50	50	ENSMUST00000234231.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29684202	29684402	+	29684277	29684402	A5SS&ES	0.16	50	50	ENSMUST00000234231.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29684315	29684402	+	29684277	29684402	A5SS	0.16	50	50	ENSMUST00000234231.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29653867	29684402	+	29653867;29658385	29658265;29684402	ES	0.16	50	50	ENSMUST00000234282.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29658385	29684768	+	29658385;29684514	29684402;29684768	ES	0.33	50	50	ENSMUST00000234282.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29653867;29684277	29684250;29684402	+	29653867;29658385	29658265;29684402	MXE	0.5	100	100	ENSMUST00000234282.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29653867;29684315	29684250;29684402	+	29653867;29658385	29658265;29684402	MXE	0.5	100	100	ENSMUST00000234282.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29658385;29684277	29684250;29684402	+	29658385	29684402	cassetteExon	0.5	100	100	ENSMUST00000234282.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29658385;29684315	29684250;29684402	+	29658385	29684402	cassetteExon	0.5	100	100	ENSMUST00000234282.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29677131	29684402	+	29658385	29684402	A5SS	0.16	50	50	ENSMUST00000234282.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29684202	29684402	+	29658385	29684402	A5SS	0.16	50	50	ENSMUST00000234282.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29653867	29684768	+	29653867;29684514	29684402;29684768	ES	0.33	50	50	ENSMUST00000234827.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29653867;29658385	29658265;29684768	+	29653867;29684514	29684402;29684768	MXE	0.5	100	100	ENSMUST00000234827.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29653867;29684277	29684250;29684402	+	29653867	29684402	cassetteExon	0.5	100	100	ENSMUST00000234827.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29653867;29684315	29684250;29684402	+	29653867	29684402	cassetteExon	0.5	100	100	ENSMUST00000234827.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29677131	29684402	+	29653867	29684402	A5SS	0.16	50	50	ENSMUST00000234827.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29684202	29684402	+	29653867	29684402	A5SS	0.16	50	50	ENSMUST00000234827.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29653867	29684768	+	29653867;29658385	29658265;29684768	ES	0.33	50	50	ENSMUST00000234691.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29653867;29684514	29684250;29684768	+	29653867;29658385	29658265;29684768	MXE	0.5	100	100	ENSMUST00000234691.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29658385;29684514	29684250;29684768	+	29658385	29684768	cassetteExon	0.5	100	100	ENSMUST00000234691.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29653867	29684250	+	29653867;29658385	29658265;29684250	ES	0.16	50	50	ENSMUST00000234472.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29664918	29684250	+	29658385	29684250	A5SS	0.16	50	50	ENSMUST00000234472.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29677131	29684250	+	29658385	29684250	A5SS	0.16	50	50	ENSMUST00000234472.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29677672	29684250	+	29658385	29684250	A5SS	0.16	50	50	ENSMUST00000234472.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29684098	29684250	+	29658385	29684250	A5SS	0.16	50	50	ENSMUST00000234472.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29664918	29684250	+	29653867	29684250	A5SS	0.14	50	50	ENSMUST00000234775.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29677131	29684250	+	29653867	29684250	A5SS	0.14	50	50	ENSMUST00000234775.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29677672	29684250	+	29653867	29684250	A5SS	0.14	50	50	ENSMUST00000234775.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29684098	29684250	+	29653867	29684250	A5SS	0.14	50	50	ENSMUST00000234775.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29653867;29684514	29684250;29684768	+	29653867	29684768	cassetteExon	0.5	100	100	ENSMUST00000234384.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29677131	29684250	+	29664918	29684250	A5SS	0.14	50	50	ENSMUST00000234887.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29677672	29684250	+	29664918	29684250	A5SS	0.14	50	50	ENSMUST00000234887.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29684098	29684250	+	29664918	29684250	A5SS	0.14	50	50	ENSMUST00000234887.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29677131	29684402	+	29677131	29684250	A3SS	0.5	50	50	ENSMUST00000234101.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29677672	29684250	+	29677131	29684250	A5SS	0.14	50	50	ENSMUST00000234101.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29684098	29684250	+	29677131	29684250	A5SS	0.14	50	50	ENSMUST00000234101.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29677131	29684402	+	29677131;29684315	29684250;29684402	ES	0.25	50	50	ENSMUST00000234276.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29684202	29684402	+	29684315	29684402	A5SS&ES	0.25	50	50	ENSMUST00000234276.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29677131;29684277	29684250;29684402	+	29677131	29684402	cassetteExon	0.5	100	100	ENSMUST00000235080.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29684202	29684402	+	29677131	29684402	A5SS	0.16	50	50	ENSMUST00000235080.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29684098	29684250	+	29677672	29684250	A5SS	0.14	50	50	ENSMUST00000235113.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29653867	29684402	+	29684315	29684402	5pMXE	0.16	50	50	ENSMUST00000234786.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29658385	29684402	+	29684315	29684402	5pMXE	0.16	50	50	ENSMUST00000234786.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29677131	29684402	+	29684315	29684402	5pMXE	0.16	50	50	ENSMUST00000234786.2	ENSMUSG00000117427.2	Gm36199	chr17	lncRNA	predicted gene, 36199
chr17	29682630	29683523	-	29666107	29683523	A3SS	0.5	50	50	ENSMUST00000234190.2	ENSMUSG00000097125.3	Gm26885	chr17	lncRNA	predicted gene, 26885
chr17	29686282	29687941	-	29686282	29686643	5pMXE	0.16	50	50	ENSMUST00000234835.2	ENSMUSG00000097125.3	Gm26885	chr17	lncRNA	predicted gene, 26885
chr17	29686282	29688535	-	29686282	29686643	5pMXE	0.16	50	50	ENSMUST00000234835.2	ENSMUSG00000097125.3	Gm26885	chr17	lncRNA	predicted gene, 26885
chr17	29686282	29693980	-	29686282	29686643	5pMXE	0.16	50	50	ENSMUST00000234835.2	ENSMUSG00000097125.3	Gm26885	chr17	lncRNA	predicted gene, 26885
chr17	29686282	29710151	-	29686282	29686643	5pMXE	0.16	50	50	ENSMUST00000234835.2	ENSMUSG00000097125.3	Gm26885	chr17	lncRNA	predicted gene, 26885
chr17	29686282	29710331	-	29686282	29686643	5pMXE	0.16	50	50	ENSMUST00000234835.2	ENSMUSG00000097125.3	Gm26885	chr17	lncRNA	predicted gene, 26885
chr17	29683629	29684062	-	29683629	29686184	A5SS	0.5	50	50	ENSMUST00000234835.2	ENSMUSG00000097125.3	Gm26885	chr17	lncRNA	predicted gene, 26885
chr17	29682630	29683007	-	29682630	29683523	A5SS	0.33	50	50	ENSMUST00000234913.2	ENSMUSG00000097125.3	Gm26885	chr17	lncRNA	predicted gene, 26885
chr17	29682630	29683457	-	29682630	29683523	A5SS	0.33	50	50	ENSMUST00000234913.2	ENSMUSG00000097125.3	Gm26885	chr17	lncRNA	predicted gene, 26885
chr17	29686282;29694125	29693980;29710151	-	29686282	29710151	cassetteExon	0.5	100	100	ENSMUST00000234040.2	ENSMUSG00000097125.3	Gm26885	chr17	lncRNA	predicted gene, 26885
chr17	29686282	29687941	-	29686282	29710151	A5SS	0.16	50	50	ENSMUST00000234040.2	ENSMUSG00000097125.3	Gm26885	chr17	lncRNA	predicted gene, 26885
chr17	29686282	29688535	-	29686282	29710151	A5SS	0.16	50	50	ENSMUST00000234040.2	ENSMUSG00000097125.3	Gm26885	chr17	lncRNA	predicted gene, 26885
chr17	29686282	29710331	-	29686282	29710151	A5SS	0.16	50	50	ENSMUST00000234040.2	ENSMUSG00000097125.3	Gm26885	chr17	lncRNA	predicted gene, 26885
chr17	29682630	29683007	-	29682630	29683457	A5SS	0.33	50	50	ENSMUST00000234435.2	ENSMUSG00000097125.3	Gm26885	chr17	lncRNA	predicted gene, 26885
chr17	29686282	29693980	-	29686282	29688535	5pMXE	0.16	50	50	ENSMUST00000235120.2	ENSMUSG00000097125.3	Gm26885	chr17	lncRNA	predicted gene, 26885
chr17	29686282	29710331	-	29686282	29688535	5pMXE	0.16	50	50	ENSMUST00000235120.2	ENSMUSG00000097125.3	Gm26885	chr17	lncRNA	predicted gene, 26885
chr17	29686282	29687941	-	29686282	29688535	A5SS	0.16	50	50	ENSMUST00000235120.2	ENSMUSG00000097125.3	Gm26885	chr17	lncRNA	predicted gene, 26885
chr17	29686282	29693980	-	29686282	29687941	5pMXE	0.16	50	50	ENSMUST00000234792.2	ENSMUSG00000097125.3	Gm26885	chr17	lncRNA	predicted gene, 26885
chr17	29686282	29710331	-	29686282	29687941	5pMXE	0.16	50	50	ENSMUST00000234792.2	ENSMUSG00000097125.3	Gm26885	chr17	lncRNA	predicted gene, 26885
chr17	29686282	29693980	-	29686282	29710331	A5SS	0.16	50	50	ENSMUST00000181920.3	ENSMUSG00000097125.3	Gm26885	chr17	lncRNA	predicted gene, 26885
chr17	29710405	29710639	+	29710405;29710544	29710494;29710639	ES	0.5	50	50	ENSMUST00000024811.9	ENSMUSG00000024014.9	Pim1	chr17	protein_coding	proviral integration site 1
chr17	29711343	29712696	+	29711005	29712696	A5SS	0.25	50	50	ENSMUST00000024811.9	ENSMUSG00000024014.9	Pim1	chr17	protein_coding	proviral integration site 1
chr17	29711400	29712696	+	29711005	29712696	A5SS	0.25	50	50	ENSMUST00000024811.9	ENSMUSG00000024014.9	Pim1	chr17	protein_coding	proviral integration site 1
chr17	29712108	29712696	+	29711005	29712696	A5SS	0.25	50	50	ENSMUST00000024811.9	ENSMUSG00000024014.9	Pim1	chr17	protein_coding	proviral integration site 1
chr17	29711400	29712696	+	29711343	29712696	A5SS	0.25	50	50	ENSMUST00000234478.2	ENSMUSG00000024014.9	Pim1	chr17	protein_coding	proviral integration site 1
chr17	29712108	29712696	+	29711343	29712696	A5SS	0.25	50	50	ENSMUST00000234478.2	ENSMUSG00000024014.9	Pim1	chr17	protein_coding	proviral integration site 1
chr17	29712108	29712696	+	29711400	29712696	A5SS	0.25	50	50	ENSMUST00000234263.2	ENSMUSG00000024014.9	Pim1	chr17	protein_coding	proviral integration site 1
chr17	29745627	29764459	-	29743126	29764459	A3SS	0.33	50	50	ENSMUST00000234305.2	ENSMUSG00000091614.3	Gm17657	chr17	protein_coding	predicted gene, 17657
chr17	29745627	29768558	-	29764550	29768558	A3SS&ES	0.25	50	50	ENSMUST00000234305.2	ENSMUSG00000091614.3	Gm17657	chr17	protein_coding	predicted gene, 17657
chr17	29745733	29764459	-	29743126	29764459	A3SS	0.33	50	50	ENSMUST00000234305.2	ENSMUSG00000091614.3	Gm17657	chr17	protein_coding	predicted gene, 17657
chr17	29745733	29768558	-	29764550	29768558	A3SS&ES	0.25	50	50	ENSMUST00000234305.2	ENSMUSG00000091614.3	Gm17657	chr17	protein_coding	predicted gene, 17657
chr17	29752107	29768558	-	29764550	29768558	A3SS&ES	0.25	50	50	ENSMUST00000234305.2	ENSMUSG00000091614.3	Gm17657	chr17	protein_coding	predicted gene, 17657
chr17	29764550	29768483	-	29764550	29768558	A5SS	0.5	50	50	ENSMUST00000234305.2	ENSMUSG00000091614.3	Gm17657	chr17	protein_coding	predicted gene, 17657
chr17	29745733	29768483	-	29745733;29764550	29764459;29768483	ES	0.5	50	50	ENSMUST00000114683.10	ENSMUSG00000079580.10	Tmem217	chr17	protein_coding	transmembrane protein 217
chr17	29745627	29764459	-	29745733	29764459	A3SS	0.33	50	50	ENSMUST00000114683.10	ENSMUSG00000079580.10	Tmem217	chr17	protein_coding	transmembrane protein 217
chr17	29745733	29768558	-	29745733	29764459	A5SS&ES	0.33	50	50	ENSMUST00000114683.10	ENSMUSG00000079580.10	Tmem217	chr17	protein_coding	transmembrane protein 217
chr17	29745733	29769468	-	29745733	29768558	5pMXE	0.25	50	50	ENSMUST00000234718.2	ENSMUSG00000079580.10	Tmem217	chr17	protein_coding	transmembrane protein 217
chr17	29745733;29764550	29764459;29768558	-	29745733	29768558	cassetteExon	0.5	100	100	ENSMUST00000234718.2	ENSMUSG00000079580.10	Tmem217	chr17	protein_coding	transmembrane protein 217
chr17	29745627	29768558	-	29745733	29768558	A3SS	0.25	50	50	ENSMUST00000234718.2	ENSMUSG00000079580.10	Tmem217	chr17	protein_coding	transmembrane protein 217
chr17	29752107	29768558	-	29745733	29768558	A3SS	0.25	50	50	ENSMUST00000234718.2	ENSMUSG00000079580.10	Tmem217	chr17	protein_coding	transmembrane protein 217
chr17	29745733	29768483	-	29745733	29768558	A5SS	0.25	50	50	ENSMUST00000234718.2	ENSMUSG00000079580.10	Tmem217	chr17	protein_coding	transmembrane protein 217
chr17	29745733	29768483	-	29764550	29768483	A3SS&ES	0.5	50	50	ENSMUST00000234620.2	ENSMUSG00000079580.10	Tmem217	chr17	protein_coding	transmembrane protein 217
chr17	29745627	29768558	-	29745627	29764459	A5SS&ES	0.5	50	50	ENSMUST00000234620.2	ENSMUSG00000079580.10	Tmem217	chr17	protein_coding	transmembrane protein 217
chr17	29745627;29764550	29764459;29768558	-	29745627	29768558	cassetteExon	0.5	100	100	ENSMUST00000234648.2	ENSMUSG00000079580.10	Tmem217	chr17	protein_coding	transmembrane protein 217
chr17	29752107	29768558	-	29745627	29768558	A3SS	0.25	50	50	ENSMUST00000234648.2	ENSMUSG00000079580.10	Tmem217	chr17	protein_coding	transmembrane protein 217
chr17	29745733	29768483	-	29745733	29764459	A5SS&ES	0.33	50	50	ENSMUST00000234979.2	ENSMUSG00000079580.10	Tmem217	chr17	protein_coding	transmembrane protein 217
chr17	29745733	29764459	-	29745733	29769468	A5SS	0.25	50	50	ENSMUST00000235062.2	ENSMUSG00000079580.10	Tmem217	chr17	protein_coding	transmembrane protein 217
chr17	29745733	29768483	-	29745733	29769468	A5SS	0.25	50	50	ENSMUST00000235062.2	ENSMUSG00000079580.10	Tmem217	chr17	protein_coding	transmembrane protein 217
chr17	29790768	29791944	+	29790709	29791944	A5SS	0.5	50	50	ENSMUST00000048677.9	ENSMUSG00000042203.9	Tbc1d22b	chr17	protein_coding	TBC1 domain family, member 22B
chr17	29899634	29904825	+	29899634	29900892	3pMXE	0.5	50	50	ENSMUST00000150388.3	ENSMUSG00000099329.3	Gm28052	chr17	lncRNA	predicted gene, 28052
chr17	29768968	29783406	+	29768968	29882146	A3SS	0.5	50	50	ENSMUST00000150388.3	ENSMUSG00000099329.3	Gm28052	chr17	lncRNA	predicted gene, 28052
chr17	29854996	29893113	+	29882280	29893113	A5SS&ES	0.5	50	50	ENSMUST00000150388.3	ENSMUSG00000099329.3	Gm28052	chr17	lncRNA	predicted gene, 28052
chr17	29879745	29882146	+	29768968	29882146	A5SS	0.25	50	50	ENSMUST00000150388.3	ENSMUSG00000099329.3	Gm28052	chr17	lncRNA	predicted gene, 28052
chr17	29880002	29882146	+	29768968	29882146	A5SS	0.25	50	50	ENSMUST00000150388.3	ENSMUSG00000099329.3	Gm28052	chr17	lncRNA	predicted gene, 28052
chr17	29880132	29882146	+	29768968	29882146	A5SS	0.25	50	50	ENSMUST00000150388.3	ENSMUSG00000099329.3	Gm28052	chr17	lncRNA	predicted gene, 28052
chr17	29898390	29899563	+	29898056	29899563	A5SS	0.5	50	50	ENSMUST00000150388.3	ENSMUSG00000099329.3	Gm28052	chr17	lncRNA	predicted gene, 28052
chr17	29900278	29900892	+	29899634	29900892	A5SS	0.33	50	50	ENSMUST00000150388.3	ENSMUSG00000099329.3	Gm28052	chr17	lncRNA	predicted gene, 28052
chr17	29807352	29815190	-	29807352;29810163	29810039;29815190	ES	0.5	50	50	ENSMUST00000163069.2	ENSMUSG00000089900.3	Tbc1d22bos	chr17	lncRNA	TBC1 domain family, member 22B, opposite strand
chr17	29834052	29845480	+	29834052;29840611	29840483;29845480	ES	0.5	50	50	ENSMUST00000024817.15	ENSMUSG00000090083.12	Rnf8	chr17	protein_coding	ring finger protein 8
chr17	29854996	29893113	+	29854996	29860190	3pMXE	0.5	50	50	ENSMUST00000024817.15	ENSMUSG00000090083.12	Rnf8	chr17	protein_coding	ring finger protein 8
chr17	29834052	29838268	+	29834052	29840483	A3SS	0.33	50	50	ENSMUST00000024817.15	ENSMUSG00000090083.12	Rnf8	chr17	protein_coding	ring finger protein 8
chr17	29840611	29845374	+	29840611	29845480	A3SS	0.5	50	50	ENSMUST00000024817.15	ENSMUSG00000090083.12	Rnf8	chr17	protein_coding	ring finger protein 8
chr17	29835202	29840483	+	29834052	29840483	A5SS	0.5	50	50	ENSMUST00000024817.15	ENSMUSG00000090083.12	Rnf8	chr17	protein_coding	ring finger protein 8
chr17	29834052	29838268	+	29834052	29845480	A3SS	0.33	50	50	ENSMUST00000162588.3	ENSMUSG00000090083.12	Rnf8	chr17	protein_coding	ring finger protein 8
chr17	29834052	29845480	+	29834052	29840483	A3SS&ES	0.33	50	50	ENSMUST00000172485.8	ENSMUSG00000090083.12	Rnf8	chr17	protein_coding	ring finger protein 8
chr17	29920057;29920255	29920214;29920459	+	29920057	29920459	cassetteExon	0.5	100	100	ENSMUST00000130871.2	ENSMUSG00000098374.2	Gm28043	chr17	protein_coding	predicted gene, 28043
chr17	29901168	29904825	+	29901168	29904883	A3SS	0.5	50	50	ENSMUST00000130871.2	ENSMUSG00000098374.2	Gm28043	chr17	protein_coding	predicted gene, 28043
chr17	29899531	29901096	+	29900986	29901096	A5SS&ES	0.5	50	50	ENSMUST00000130871.2	ENSMUSG00000098374.2	Gm28043	chr17	protein_coding	predicted gene, 28043
chr17	29913509	29913759	+	29913278	29913759	A5SS	0.5	50	50	ENSMUST00000130871.2	ENSMUSG00000098374.2	Gm28043	chr17	protein_coding	predicted gene, 28043
chr17	29879745;29880002	29879877;29882146	+	29879745	29882146	cassetteExon	0.5	100	100	ENSMUST00000024816.13	ENSMUSG00000024019.19	Cmtr1	chr17	protein_coding	cap methyltransferase 1
chr17	29879745;29880132	29879877;29882146	+	29879745	29882146	cassetteExon	0.5	100	100	ENSMUST00000024816.13	ENSMUSG00000024019.19	Cmtr1	chr17	protein_coding	cap methyltransferase 1
chr17	29879745	29882106	+	29879745	29882146	A3SS	0.33	50	50	ENSMUST00000024816.13	ENSMUSG00000024019.19	Cmtr1	chr17	protein_coding	cap methyltransferase 1
chr17	29895263;29901168	29900892;29904825	+	29895263;29899634	29897964;29904825	MXE	0.5	100	100	ENSMUST00000235031.2	ENSMUSG00000024019.19	Cmtr1	chr17	protein_coding	cap methyltransferase 1
chr17	29899634;29901168	29900892;29904825	+	29899634	29904825	cassetteExon	0.5	100	100	ENSMUST00000235031.2	ENSMUSG00000024019.19	Cmtr1	chr17	protein_coding	cap methyltransferase 1
chr17	29879745	29882106	+	29879745	29879877	A3SS&ES	0.33	50	50	ENSMUST00000234911.2	ENSMUSG00000024019.19	Cmtr1	chr17	protein_coding	cap methyltransferase 1
chr17	29880132	29882146	+	29880002	29882146	A5SS	0.33	50	50	ENSMUST00000234911.2	ENSMUSG00000024019.19	Cmtr1	chr17	protein_coding	cap methyltransferase 1
chr17	29879745	29882146	+	29880132	29882146	5pMXE	0.25	50	50	ENSMUST00000130423.4	ENSMUSG00000024019.19	Cmtr1	chr17	protein_coding	cap methyltransferase 1
chr17	29895263	29897964	+	29895263	29900892	A3SS	0.5	50	50	ENSMUST00000234388.2	ENSMUSG00000024019.19	Cmtr1	chr17	protein_coding	cap methyltransferase 1
chr17	29899634	29900892	+	29895263	29900892	A5SS	0.33	50	50	ENSMUST00000234388.2	ENSMUSG00000024019.19	Cmtr1	chr17	protein_coding	cap methyltransferase 1
chr17	29899634	29904825	+	29901168	29904825	A5SS&ES	0.5	50	50	ENSMUST00000234388.2	ENSMUSG00000024019.19	Cmtr1	chr17	protein_coding	cap methyltransferase 1
chr17	29900278	29900892	+	29895263	29900892	A5SS	0.33	50	50	ENSMUST00000234388.2	ENSMUSG00000024019.19	Cmtr1	chr17	protein_coding	cap methyltransferase 1
chr17	29923443;29924294	29924245;29924463	-	29923443	29924463	cassetteExon	0.5	100	100	ENSMUST00000137079.9	ENSMUSG00000024018.19	Ccdc167	chr17	protein_coding	coiled-coil domain containing 167
chr17	29923443;29924297	29924245;29924463	-	29923443	29924463	cassetteExon	0.5	100	100	ENSMUST00000137079.9	ENSMUSG00000024018.19	Ccdc167	chr17	protein_coding	coiled-coil domain containing 167
chr17	29919226	29923344	-	29909020	29923344	A3SS	0.5	50	50	ENSMUST00000137079.9	ENSMUSG00000024018.19	Ccdc167	chr17	protein_coding	coiled-coil domain containing 167
chr17	29932130	29935908	-	29924557	29935908	A3SS	0.5	50	50	ENSMUST00000137079.9	ENSMUSG00000024018.19	Ccdc167	chr17	protein_coding	coiled-coil domain containing 167
chr17	29924294	29924463	-	29924297	29924463	A3SS	0.33	50	50	ENSMUST00000129091.9	ENSMUSG00000024018.19	Ccdc167	chr17	protein_coding	coiled-coil domain containing 167
chr17	29919226	29923229	-	29919226	29923344	A5SS	0.5	50	50	ENSMUST00000129091.9	ENSMUSG00000024018.19	Ccdc167	chr17	protein_coding	coiled-coil domain containing 167
chr17	30057563	30058779	-	30057563;30058546	30058523;30058779	ES	0.5	50	50	ENSMUST00000171691.9	ENSMUSG00000043557.17	Mdga1	chr17	protein_coding	MAM domain containing glycosylphosphatidylinositol anchor 1
chr17	30076703	30108828	-	30076703	30106421	5pMXE	0.5	50	50	ENSMUST00000171691.9	ENSMUSG00000043557.17	Mdga1	chr17	protein_coding	MAM domain containing glycosylphosphatidylinositol anchor 1
chr17	30051943	30052196	-	30051995	30052196	A3SS	0.5	50	50	ENSMUST00000171691.9	ENSMUSG00000043557.17	Mdga1	chr17	protein_coding	MAM domain containing glycosylphosphatidylinositol anchor 1
chr17	30059870	30061093	-	30059922	30061093	A3SS	0.5	50	50	ENSMUST00000171691.9	ENSMUSG00000043557.17	Mdga1	chr17	protein_coding	MAM domain containing glycosylphosphatidylinositol anchor 1
chr17	30068764	30069466	-	30068746	30069466	A3SS	0.5	50	50	ENSMUST00000171691.9	ENSMUSG00000043557.17	Mdga1	chr17	protein_coding	MAM domain containing glycosylphosphatidylinositol anchor 1
chr17	30076734	30106421	-	30076703	30106421	A3SS	0.5	50	50	ENSMUST00000171691.9	ENSMUSG00000043557.17	Mdga1	chr17	protein_coding	MAM domain containing glycosylphosphatidylinositol anchor 1
chr17	30052326	30053948	-	30052326	30056966	A5SS	0.5	50	50	ENSMUST00000171691.9	ENSMUSG00000043557.17	Mdga1	chr17	protein_coding	MAM domain containing glycosylphosphatidylinositol anchor 1
chr17	30059870	30061093	-	30059870	30061087	A5SS	0.5	50	50	ENSMUST00000167190.9	ENSMUSG00000043557.17	Mdga1	chr17	protein_coding	MAM domain containing glycosylphosphatidylinositol anchor 1
chr17	30224282	30354297	+	30224282;30279824	30279784;30354297	ES	0.33	50	50	ENSMUST00000226208.3	ENSMUSG00000044477.13	Zfand3	chr17	protein_coding	zinc finger, AN1-type domain 3
chr17	30354479	30411537	+	30354479;30372342	30372277;30411537	ES	0.33	50	50	ENSMUST00000226208.3	ENSMUSG00000044477.13	Zfand3	chr17	protein_coding	zinc finger, AN1-type domain 3
chr17	30226837	30354297	+	30279824	30354297	A5SS&ES	0.33	50	50	ENSMUST00000226208.3	ENSMUSG00000044477.13	Zfand3	chr17	protein_coding	zinc finger, AN1-type domain 3
chr17	30279524	30279784	+	30224282	30279784	A5SS	0.5	50	50	ENSMUST00000226208.3	ENSMUSG00000044477.13	Zfand3	chr17	protein_coding	zinc finger, AN1-type domain 3
chr17	30354633	30411537	+	30372342	30411537	A5SS&ES	0.33	50	50	ENSMUST00000226208.3	ENSMUSG00000044477.13	Zfand3	chr17	protein_coding	zinc finger, AN1-type domain 3
chr17	30355215	30372277	+	30354479	30372277	A5SS	0.5	50	50	ENSMUST00000226208.3	ENSMUSG00000044477.13	Zfand3	chr17	protein_coding	zinc finger, AN1-type domain 3
chr17	30416654	30426992	+	30411704	30426992	A5SS	0.5	50	50	ENSMUST00000226208.3	ENSMUSG00000044477.13	Zfand3	chr17	protein_coding	zinc finger, AN1-type domain 3
chr17	30226837	30354297	+	30224282	30354297	A5SS	0.33	50	50	ENSMUST00000226421.3	ENSMUSG00000044477.13	Zfand3	chr17	protein_coding	zinc finger, AN1-type domain 3
chr17	30354633	30411537	+	30354479	30411537	A5SS	0.33	50	50	ENSMUST00000226308.2	ENSMUSG00000044477.13	Zfand3	chr17	protein_coding	zinc finger, AN1-type domain 3
chr17	30439544	30493828	-	30439544;30447852	30447774;30493828	ES	0.33	50	50	ENSMUST00000168787.8	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30746639	30795120	-	30746639;30749339	30749128;30795120	ES	0.33	50	50	ENSMUST00000168787.8	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30749339	31142560	-	30749339	30795120	5pMXE	0.33	50	50	ENSMUST00000168787.8	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30518694;30523491	30523305;30553197	-	30518694	30553197	cassetteExon	0.5	100	100	ENSMUST00000168787.8	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30485545	30493828	-	30447852	30493828	A3SS	0.33	50	50	ENSMUST00000168787.8	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30583812	30732530	-	30553306	30732530	A3SS	0.14	50	50	ENSMUST00000168787.8	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30675544	30732530	-	30553306	30732530	A3SS	0.14	50	50	ENSMUST00000168787.8	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30678576	30732530	-	30553306	30732530	A3SS	0.14	50	50	ENSMUST00000168787.8	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30700156	30732530	-	30553306	30732530	A3SS	0.14	50	50	ENSMUST00000168787.8	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30728500	30732530	-	30553306	30732530	A3SS	0.14	50	50	ENSMUST00000168787.8	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30493935	30511044	-	30493935	30518505	A5SS	0.5	50	50	ENSMUST00000168787.8	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30518694	30518899	-	30518694	30553197	A5SS	0.33	50	50	ENSMUST00000168787.8	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30553306	30553837	-	30553306	30732530	A5SS	0.14	50	50	ENSMUST00000168787.8	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30553306	30622020	-	30553306	30732530	A5SS	0.14	50	50	ENSMUST00000168787.8	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30553306	30631983	-	30553306	30732530	A5SS	0.14	50	50	ENSMUST00000168787.8	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30553306	30633504	-	30553306	30732530	A5SS	0.14	50	50	ENSMUST00000168787.8	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30553306	30664888	-	30553306	30732530	A5SS	0.14	50	50	ENSMUST00000168787.8	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30553306	30710626	-	30553306	30732530	A5SS	0.14	50	50	ENSMUST00000168787.8	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30749339	30790767	-	30749339	30795120	A5SS	0.33	50	50	ENSMUST00000168787.8	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30439118	30439484	-	30439118	30439319	A5SS	0.5	50	50	ENSMUST00000079924.8	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30743951;30746639	30746276;30795120	-	30743951	30795120	cassetteExon	0.5	100	100	ENSMUST00000235587.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30749339	30795120	-	30743951	30795120	A3SS	0.33	50	50	ENSMUST00000235587.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30743951	30795120	-	30743951	30746276	5pMXE	0.5	50	50	ENSMUST00000237164.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30439544;30447852	30447774;30732530	-	30439544;30553306	30493828;30732530	MXE	0.5	100	100	ENSMUST00000237164.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30485545	30493828	-	30439544	30493828	A3SS	0.33	50	50	ENSMUST00000237164.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30553306	30732530	-	30447852	30732530	A3SS	0.14	50	50	ENSMUST00000237732.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30583812	30732530	-	30447852	30732530	A3SS	0.14	50	50	ENSMUST00000237732.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30675544	30732530	-	30447852	30732530	A3SS	0.14	50	50	ENSMUST00000237732.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30678576	30732530	-	30447852	30732530	A3SS	0.14	50	50	ENSMUST00000237732.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30700156	30732530	-	30447852	30732530	A3SS	0.14	50	50	ENSMUST00000237732.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30728500	30732530	-	30447852	30732530	A3SS	0.14	50	50	ENSMUST00000237732.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30439544	30493828	-	30439544	30447774	A5SS&ES	0.5	50	50	ENSMUST00000237732.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30447852	30493828	-	30447852	30732530	A5SS	0.5	50	50	ENSMUST00000237732.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30553306	30633504	-	30553306;30622132	30622020;30633504	ES	0.5	50	50	ENSMUST00000235342.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30553306	30553837	-	30553306	30622020	A5SS	0.25	50	50	ENSMUST00000235342.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30553306	30631983	-	30553306	30622020	A5SS&ES	0.25	50	50	ENSMUST00000235342.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30749339	31142560	-	30749339	30790767	5pMXE	0.33	50	50	ENSMUST00000237048.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30553306	30633504	-	30553306	30631983	5pMXE	0.14	50	50	ENSMUST00000235643.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30553306	30664888	-	30553306	30631983	5pMXE	0.14	50	50	ENSMUST00000235643.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30553306	30710626	-	30553306	30631983	5pMXE	0.14	50	50	ENSMUST00000235643.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30553306	30553837	-	30553306	30631983	A5SS	0.14	50	50	ENSMUST00000235643.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30553306	30664888	-	30553306	30633504	5pMXE	0.14	50	50	ENSMUST00000235431.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30553306	30710626	-	30553306	30633504	5pMXE	0.14	50	50	ENSMUST00000235431.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30553306	30553837	-	30553306	30633504	A5SS	0.14	50	50	ENSMUST00000235431.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30518694	30518899	-	30518694	30523305	A5SS	0.33	50	50	ENSMUST00000237078.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30553306	30553837	-	30553306	30710626	A5SS	0.14	50	50	ENSMUST00000236153.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30553306	30622020	-	30553306	30710626	A5SS	0.14	50	50	ENSMUST00000236153.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30553306	30664888	-	30553306	30710626	A5SS	0.14	50	50	ENSMUST00000236153.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30553306	30553837	-	30553306	30664888	A5SS	0.14	50	50	ENSMUST00000235555.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30553306	30622020	-	30553306	30664888	A5SS	0.14	50	50	ENSMUST00000235555.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30675544	30732530	-	30583812	30732530	A3SS	0.14	50	50	ENSMUST00000236584.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30678576	30732530	-	30583812	30732530	A3SS	0.14	50	50	ENSMUST00000236584.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30700156	30732530	-	30583812	30732530	A3SS	0.14	50	50	ENSMUST00000236584.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30728500	30732530	-	30583812	30732530	A3SS	0.14	50	50	ENSMUST00000236584.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30678576	30732530	-	30675544	30732530	A3SS	0.14	50	50	ENSMUST00000237013.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30700156	30732530	-	30675544	30732530	A3SS	0.14	50	50	ENSMUST00000237013.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30728500	30732530	-	30675544	30732530	A3SS	0.14	50	50	ENSMUST00000237013.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30700156	30732530	-	30678576	30732530	A3SS	0.14	50	50	ENSMUST00000236233.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30728500	30732530	-	30678576	30732530	A3SS	0.14	50	50	ENSMUST00000236233.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30728500	30732530	-	30700156	30732530	A3SS	0.14	50	50	ENSMUST00000237825.2	ENSMUSG00000062202.15	Btbd9	chr17	protein_coding	BTB (POZ) domain containing 9
chr17	30746639	30795120	-	30746639	30749128	A5SS&ES	0.5	50	50	ENSMUST00000235858.2	ENSMUSG00000118341.2	Gm50252	chr17	lncRNA	predicted gene, 50252
chr17	30795743	30801371	+	30796183	30801371	A5SS	0.5	50	50	ENSMUST00000236802.2	ENSMUSG00000117725.2	Gm50240	chr17	lncRNA	predicted gene, 50240
chr17	30819153;30822491	30822361;30822994	-	30819153	30822994	cassetteExon	0.5	100	100	ENSMUST00000236335.2	ENSMUSG00000024026.14	Glo1	chr17	protein_coding	glyoxalase 1
chr17	30816616	30816779	-	30815437	30816779	A3SS	0.5	50	50	ENSMUST00000236335.2	ENSMUSG00000024026.14	Glo1	chr17	protein_coding	glyoxalase 1
chr17	30816866	30819013	-	30816846	30819013	A3SS	0.5	50	50	ENSMUST00000236335.2	ENSMUSG00000024026.14	Glo1	chr17	protein_coding	glyoxalase 1
chr17	30815437	30815685	-	30815437	30816779	A5SS	0.5	50	50	ENSMUST00000236335.2	ENSMUSG00000024026.14	Glo1	chr17	protein_coding	glyoxalase 1
chr17	30819153	30821221	-	30819153	30822994	A5SS	0.33	50	50	ENSMUST00000236335.2	ENSMUSG00000024026.14	Glo1	chr17	protein_coding	glyoxalase 1
chr17	30819153	30821221	-	30819153	30822361	A5SS	0.33	50	50	ENSMUST00000024823.14	ENSMUSG00000024026.14	Glo1	chr17	protein_coding	glyoxalase 1
chr17	30843907	30845756	-	30831770	30845756	A3SS	0.5	50	50	ENSMUST00000236619.2	ENSMUSG00000024026.14	Glo1	chr17	protein_coding	glyoxalase 1
chr17	30815437	30816779	-	30815437;30816616	30815685;30816779	ES	0.5	50	50	ENSMUST00000236995.2	ENSMUSG00000024026.14	Glo1	chr17	protein_coding	glyoxalase 1
chr17	30855050	30863531	+	30855050;30862314	30862230;30863531	ES	0.5	50	50	ENSMUST00000170651.2	ENSMUSG00000033826.11	Dnah8	chr17	protein_coding	dynein, axonemal, heavy chain 8
chr17	31023157;31023984	31023924;31026179	+	31023157	31026179	cassetteExon	0.5	100	100	ENSMUST00000170651.2	ENSMUSG00000033826.11	Dnah8	chr17	protein_coding	dynein, axonemal, heavy chain 8
chr17	31009956	31011610	+	31009956	31013607	A3SS	0.5	50	50	ENSMUST00000170651.2	ENSMUSG00000033826.11	Dnah8	chr17	protein_coding	dynein, axonemal, heavy chain 8
chr17	31070758	31073831	+	31070758	31073775	A3SS	0.5	50	50	ENSMUST00000170651.2	ENSMUSG00000033826.11	Dnah8	chr17	protein_coding	dynein, axonemal, heavy chain 8
chr17	30846116	30854295	+	30843534	30854295	A5SS	0.25	50	50	ENSMUST00000170651.2	ENSMUSG00000033826.11	Dnah8	chr17	protein_coding	dynein, axonemal, heavy chain 8
chr17	30846192	30854295	+	30843534	30854295	A5SS	0.25	50	50	ENSMUST00000170651.2	ENSMUSG00000033826.11	Dnah8	chr17	protein_coding	dynein, axonemal, heavy chain 8
chr17	30846199	30854295	+	30843534	30854295	A5SS	0.25	50	50	ENSMUST00000170651.2	ENSMUSG00000033826.11	Dnah8	chr17	protein_coding	dynein, axonemal, heavy chain 8
chr17	31051361	31052530	+	31049863	31052530	A5SS	0.5	50	50	ENSMUST00000170651.2	ENSMUSG00000033826.11	Dnah8	chr17	protein_coding	dynein, axonemal, heavy chain 8
chr17	31065529	31070602	+	31059687	31070602	A5SS	0.5	50	50	ENSMUST00000170651.2	ENSMUSG00000033826.11	Dnah8	chr17	protein_coding	dynein, axonemal, heavy chain 8
chr17	31073338	31073775	+	31070758	31073775	A5SS	0.5	50	50	ENSMUST00000170651.2	ENSMUSG00000033826.11	Dnah8	chr17	protein_coding	dynein, axonemal, heavy chain 8
chr17	30846192	30854295	+	30846116	30854295	A5SS	0.25	50	50	ENSMUST00000237551.2	ENSMUSG00000033826.11	Dnah8	chr17	protein_coding	dynein, axonemal, heavy chain 8
chr17	30846199	30854295	+	30846116	30854295	A5SS	0.25	50	50	ENSMUST00000237551.2	ENSMUSG00000033826.11	Dnah8	chr17	protein_coding	dynein, axonemal, heavy chain 8
chr17	30846192	30854295	+	30846199	30854295	A5SS	0.25	50	50	ENSMUST00000236118.2	ENSMUSG00000033826.11	Dnah8	chr17	protein_coding	dynein, axonemal, heavy chain 8
chr17	31205609	31208418	+	31205609;31207071	31206814;31208418	ES	0.5	50	50	ENSMUST00000114555.3	ENSMUSG00000054134.15	Umodl1	chr17	protein_coding	uromodulin-like 1
chr17	31221025	31221786	+	31218200	31221786	A5SS	0.5	50	50	ENSMUST00000114555.3	ENSMUSG00000054134.15	Umodl1	chr17	protein_coding	uromodulin-like 1
chr17	31313752;31317277	31317227;31323011	+	31313752	31323011	cassetteExon	0.5	100	100	ENSMUST00000236391.2	ENSMUSG00000024030.8	Abcg1	chr17	protein_coding	ATP binding cassette subfamily G member 1
chr17	31283602	31301578	+	31283602	31311283	A3SS	0.5	50	50	ENSMUST00000236391.2	ENSMUSG00000024030.8	Abcg1	chr17	protein_coding	ATP binding cassette subfamily G member 1
chr17	31330031	31331903	+	31330031;31330353	31330195;31331903	ES	0.5	50	50	ENSMUST00000024829.8	ENSMUSG00000024030.8	Abcg1	chr17	protein_coding	ATP binding cassette subfamily G member 1
chr17	31313752	31323011	+	31313752	31317227	3pMXE	0.5	50	50	ENSMUST00000139013.2	ENSMUSG00000024030.8	Abcg1	chr17	protein_coding	ATP binding cassette subfamily G member 1
chr17	31373026	31377985	+	31373026;31374653	31374522;31377985	ES	0.5	50	50	ENSMUST00000148215.9	ENSMUSG00000086010.9	Gm15318	chr17	lncRNA	predicted gene 15318
chr17	31371946;31372641	31372605;31372845	+	31371946	31372845	cassetteExon	0.5	100	100	ENSMUST00000148215.9	ENSMUSG00000086010.9	Gm15318	chr17	lncRNA	predicted gene 15318
chr17	31378061	31379624	+	31378061	31380395	A3SS	0.5	50	50	ENSMUST00000148215.9	ENSMUSG00000086010.9	Gm15318	chr17	lncRNA	predicted gene 15318
chr17	31378052	31380395	+	31378061	31380395	A5SS	0.33	50	50	ENSMUST00000148215.9	ENSMUSG00000086010.9	Gm15318	chr17	lncRNA	predicted gene 15318
chr17	31378504	31380395	+	31378061	31380395	A5SS	0.33	50	50	ENSMUST00000148215.9	ENSMUSG00000086010.9	Gm15318	chr17	lncRNA	predicted gene 15318
chr17	31378504	31380395	+	31378052	31380395	A5SS	0.33	50	50	ENSMUST00000146320.3	ENSMUSG00000086010.9	Gm15318	chr17	lncRNA	predicted gene 15318
chr17	31380567	31383901	-	31380567;31381781	31381629;31383901	ES	0.5	50	50	ENSMUST00000024831.8	ENSMUSG00000024032.8	Tff1	chr17	protein_coding	trefoil factor 1
chr17	31413976	31416575	-	31413982	31416575	A3SS	0.5	50	50	ENSMUST00000024833.13	ENSMUSG00000024034.14	Tmprss3	chr17	protein_coding	transmembrane protease, serine 3
chr17	31416716	31417141	-	31416716	31417802	A5SS	0.5	50	50	ENSMUST00000114549.4	ENSMUSG00000024034.14	Tmprss3	chr17	protein_coding	transmembrane protease, serine 3
chr17	31428779	31432691	+	31428779	31432706	A3SS	0.5	50	50	ENSMUST00000236745.2	ENSMUSG00000042345.16	Ubash3a	chr17	protein_coding	ubiquitin associated and SH3 domain containing, A
chr17	31432892	31434121	+	31432892	31434011	A3SS	0.5	50	50	ENSMUST00000236745.2	ENSMUSG00000042345.16	Ubash3a	chr17	protein_coding	ubiquitin associated and SH3 domain containing, A
chr17	31434209	31435020	+	31434209	31436938	A3SS	0.5	50	50	ENSMUST00000236745.2	ENSMUSG00000042345.16	Ubash3a	chr17	protein_coding	ubiquitin associated and SH3 domain containing, A
chr17	31431205	31432706	+	31428779	31432706	A5SS	0.33	50	50	ENSMUST00000236745.2	ENSMUSG00000042345.16	Ubash3a	chr17	protein_coding	ubiquitin associated and SH3 domain containing, A
chr17	31431333	31432706	+	31428779	31432706	A5SS	0.33	50	50	ENSMUST00000236745.2	ENSMUSG00000042345.16	Ubash3a	chr17	protein_coding	ubiquitin associated and SH3 domain containing, A
chr17	31458250	31460215	+	31458259	31460215	A5SS	0.33	50	50	ENSMUST00000236745.2	ENSMUSG00000042345.16	Ubash3a	chr17	protein_coding	ubiquitin associated and SH3 domain containing, A
chr17	31456253	31456862	+	31456253	31460215	A3SS	0.5	50	50	ENSMUST00000048656.15	ENSMUSG00000042345.16	Ubash3a	chr17	protein_coding	ubiquitin associated and SH3 domain containing, A
chr17	31458250	31460215	+	31456253	31460215	A5SS	0.33	50	50	ENSMUST00000048656.15	ENSMUSG00000042345.16	Ubash3a	chr17	protein_coding	ubiquitin associated and SH3 domain containing, A
chr17	31458259	31460215	+	31456253	31460215	A5SS	0.33	50	50	ENSMUST00000048656.15	ENSMUSG00000042345.16	Ubash3a	chr17	protein_coding	ubiquitin associated and SH3 domain containing, A
chr17	31431333	31432706	+	31431205	31432706	A5SS	0.33	50	50	ENSMUST00000151620.9	ENSMUSG00000042345.16	Ubash3a	chr17	protein_coding	ubiquitin associated and SH3 domain containing, A
chr17	31466715	31472034	+	31466715	31466913	A3SS&ES	0.5	50	50	ENSMUST00000237537.2	ENSMUSG00000117899.2	Gm50218	chr17	lncRNA	predicted gene, 50218
chr17	31467012	31472034	+	31467012	31476569	A3SS	0.5	50	50	ENSMUST00000237537.2	ENSMUSG00000117899.2	Gm50218	chr17	lncRNA	predicted gene, 50218
chr17	31466715	31472034	+	31466715;31467012	31466913;31472034	ES	0.5	50	50	ENSMUST00000235624.2	ENSMUSG00000117899.2	Gm50218	chr17	lncRNA	predicted gene, 50218
chr17	31492612	31496176	-	31492612	31495755	5pMXE	0.5	50	50	ENSMUST00000236379.2	ENSMUSG00000024033.11	Rsph1	chr17	protein_coding	radial spoke head 1 homolog (Chlamydomonas)
chr17	31492396	31496176	-	31492396;31492612	31492499;31496176	ES	0.5	50	50	ENSMUST00000024832.9	ENSMUSG00000024033.11	Rsph1	chr17	protein_coding	radial spoke head 1 homolog (Chlamydomonas)
chr17	31519481	31534468	+	31519481;31526335	31526254;31534468	ES	0.5	50	50	ENSMUST00000237389.2	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31526335	31526722	+	31526335	31534468	A3SS	0.5	50	50	ENSMUST00000237389.2	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31514728	31519264	+	31509054	31519264	A5SS	0.12	50	50	ENSMUST00000237389.2	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31515005	31519264	+	31509054	31519264	A5SS	0.12	50	50	ENSMUST00000237389.2	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31515229	31519264	+	31509054	31519264	A5SS	0.12	50	50	ENSMUST00000237389.2	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31515397	31519264	+	31509054	31519264	A5SS	0.12	50	50	ENSMUST00000237389.2	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31515889	31519264	+	31509054	31519264	A5SS	0.12	50	50	ENSMUST00000237389.2	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31516043	31519264	+	31509054	31519264	A5SS	0.12	50	50	ENSMUST00000237389.2	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31516153	31519264	+	31509054	31519264	A5SS	0.12	50	50	ENSMUST00000237389.2	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31524604	31526254	+	31519481	31526254	A5SS	0.33	50	50	ENSMUST00000237389.2	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31524939	31526254	+	31519481	31526254	A5SS	0.33	50	50	ENSMUST00000237389.2	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31547203	31554708	+	31547203;31552671	31552546;31554708	ES	0.5	50	50	ENSMUST00000171233.9	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31552671	31552855	+	31552671	31554708	A3SS	0.5	50	50	ENSMUST00000171233.9	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31515005	31519264	+	31514728	31519264	A5SS	0.12	50	50	ENSMUST00000171233.9	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31515229	31519264	+	31514728	31519264	A5SS	0.12	50	50	ENSMUST00000171233.9	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31515397	31519264	+	31514728	31519264	A5SS	0.12	50	50	ENSMUST00000171233.9	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31515889	31519264	+	31514728	31519264	A5SS	0.12	50	50	ENSMUST00000171233.9	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31516043	31519264	+	31514728	31519264	A5SS	0.12	50	50	ENSMUST00000171233.9	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31516153	31519264	+	31514728	31519264	A5SS	0.12	50	50	ENSMUST00000171233.9	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31555010	31556344	+	31554798	31556344	A5SS	0.5	50	50	ENSMUST00000171233.9	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31515229	31519264	+	31515005	31519264	A5SS	0.12	50	50	ENSMUST00000237460.2	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31515397	31519264	+	31515005	31519264	A5SS	0.12	50	50	ENSMUST00000237460.2	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31515889	31519264	+	31515005	31519264	A5SS	0.12	50	50	ENSMUST00000237460.2	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31516043	31519264	+	31515005	31519264	A5SS	0.12	50	50	ENSMUST00000237460.2	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31516153	31519264	+	31515005	31519264	A5SS	0.12	50	50	ENSMUST00000237460.2	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31515397	31519264	+	31515229	31519264	A5SS	0.12	50	50	ENSMUST00000235972.2	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31515889	31519264	+	31515229	31519264	A5SS	0.12	50	50	ENSMUST00000235972.2	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31516043	31519264	+	31515229	31519264	A5SS	0.12	50	50	ENSMUST00000235972.2	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31516153	31519264	+	31515229	31519264	A5SS	0.12	50	50	ENSMUST00000235972.2	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31515397	31519264	+	31515889	31519264	A5SS	0.12	50	50	ENSMUST00000165149.3	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31516043	31519264	+	31515889	31519264	A5SS	0.12	50	50	ENSMUST00000165149.3	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31516153	31519264	+	31515889	31519264	A5SS	0.12	50	50	ENSMUST00000165149.3	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31516043	31519264	+	31515397	31519264	A5SS	0.12	50	50	ENSMUST00000236251.2	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31516153	31519264	+	31515397	31519264	A5SS	0.12	50	50	ENSMUST00000236251.2	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31516043	31519264	+	31516153	31519264	A5SS	0.12	50	50	ENSMUST00000237932.2	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31524939	31526254	+	31524604	31526254	A5SS	0.33	50	50	ENSMUST00000237835.2	ENSMUSG00000024036.17	Slc37a1	chr17	protein_coding	solute carrier family 37 (glycerol-3-phosphate transporter), member 1
chr17	31605330	31634254	+	31605330;31633145	31633075;31634254	ES	0.5	50	50	ENSMUST00000047168.13	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31633145	31639219	+	31633145;31634331	31634254;31639219	ES	0.33	50	50	ENSMUST00000047168.13	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31634331	31662140	+	31634331;31639262	31639219;31662140	ES	0.2	50	50	ENSMUST00000047168.13	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31639262	31662812	+	31639262;31662194	31662140;31662812	ES	0.25	50	50	ENSMUST00000047168.13	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31662882	31672376	+	31662882;31667425	31667341;31672376	ES	0.5	50	50	ENSMUST00000047168.13	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31672454	31678049	+	31672454;31674102	31674028;31678049	ES	0.33	50	50	ENSMUST00000047168.13	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31678979	31680545	+	31678979;31679235	31679153;31680545	ES	0.25	50	50	ENSMUST00000047168.13	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31685442	31689655	+	31685442;31688872	31688768;31689655	ES	0.5	50	50	ENSMUST00000047168.13	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31678979	31680633	+	31678979	31679153	A3SS&ES	0.33	50	50	ENSMUST00000047168.13	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31690828	31692138	+	31690828	31692132	A3SS	0.5	50	50	ENSMUST00000047168.13	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31692253	31694902	+	31692253	31694899	A3SS	0.5	50	50	ENSMUST00000047168.13	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31639231	31662140	+	31639262	31662140	A5SS	0.2	50	50	ENSMUST00000047168.13	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31652182	31662140	+	31639262	31662140	A5SS	0.2	50	50	ENSMUST00000047168.13	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31679223	31680545	+	31679235	31680545	A5SS	0.25	50	50	ENSMUST00000047168.13	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31679955	31680545	+	31679235	31680545	A5SS	0.25	50	50	ENSMUST00000047168.13	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31690168	31690733	+	31689783	31690733	A5SS	0.5	50	50	ENSMUST00000047168.13	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31690856	31692132	+	31690828	31692132	A5SS	0.5	50	50	ENSMUST00000047168.13	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31692246	31694899	+	31692253	31694899	A5SS	0.5	50	50	ENSMUST00000047168.13	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31692246	31694902	+	31692253	31694902	A5SS	0.5	50	50	ENSMUST00000127929.8	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31605330	31662812	+	31605330;31634331	31634254;31662812	ES	0.25	50	50	ENSMUST00000143549.9	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31605330;31639262	31639219;31662812	+	31605330;31634331	31634254;31662812	MXE	0.5	100	100	ENSMUST00000143549.9	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31605330;31662194	31662140;31662812	+	31605330;31634331	31634254;31662812	MXE	0.5	100	100	ENSMUST00000143549.9	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31634331;31639262	31639219;31662812	+	31634331	31662812	cassetteExon	0.5	100	100	ENSMUST00000143549.9	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31634331;31662194	31662140;31662812	+	31634331	31662812	cassetteExon	0.5	100	100	ENSMUST00000143549.9	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31605330	31639219	+	31605330;31634331	31634254;31639219	ES	0.33	50	50	ENSMUST00000131417.9	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31605330;31633145	31633075;31639219	+	31605330;31634331	31634254;31639219	MXE	0.5	100	100	ENSMUST00000131417.9	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31605330;31662194	31662140;31662812	+	31605330;31639262	31634254;31662812	MXE	0.5	100	100	ENSMUST00000131417.9	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31634331;31662194	31662140;31662812	+	31634331;31639262	31639219;31662812	MXE	0.5	100	100	ENSMUST00000131417.9	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31605330	31639219	+	31605330;31633145	31633075;31639219	ES	0.33	50	50	ENSMUST00000134525.9	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31605330;31634331	31634254;31662140	+	31605330;31639262	31633075;31662140	MXE	0.5	100	100	ENSMUST00000134525.9	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31605330;31634331	31634254;31662812	+	31605330;31662194	31633075;31662812	MXE	0.5	100	100	ENSMUST00000134525.9	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31633145;31634331	31634254;31662140	+	31633145;31639262	31639219;31662140	MXE	0.5	100	100	ENSMUST00000134525.9	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31633145;31634331	31634254;31662812	+	31633145;31662194	31639219;31662812	MXE	0.5	100	100	ENSMUST00000134525.9	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31605330;31639262	31639219;31662812	+	31605330	31662812	cassetteExon	0.5	100	100	ENSMUST00000236454.2	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31605330;31662194	31662140;31662812	+	31605330	31662812	cassetteExon	0.5	100	100	ENSMUST00000236454.2	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31605330	31633075	+	31605330	31662812	A3SS	0.2	50	50	ENSMUST00000236454.2	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31605330;31634331	31634254;31662812	+	31605330;31639262	31633075;31662812	MXE	0.5	100	100	ENSMUST00000236077.2	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31605330;31662194	31662140;31662812	+	31605330;31639262	31633075;31662812	MXE	0.5	100	100	ENSMUST00000236077.2	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31633145;31634331	31634254;31662812	+	31633145;31639262	31639219;31662812	MXE	0.5	100	100	ENSMUST00000236077.2	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31605330;31662194	31662140;31662812	+	31605330;31639262	31639219;31662812	MXE	0.5	100	100	ENSMUST00000236874.2	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31662882;31667425	31667341;31678049	+	31662882;31674102	31672376;31678049	MXE	0.5	100	100	ENSMUST00000236874.2	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31605330;31634331	31634254;31662140	+	31605330	31662140	cassetteExon	0.5	100	100	ENSMUST00000235644.2	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31605330;31639231	31639219;31662140	+	31605330	31662140	cassetteExon	0.5	100	100	ENSMUST00000235644.2	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31605330;31639262	31639219;31662140	+	31605330	31662140	cassetteExon	0.5	100	100	ENSMUST00000235644.2	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31605330	31633075	+	31605330	31662140	A3SS	0.2	50	50	ENSMUST00000235644.2	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31652182	31662140	+	31605330	31662140	A5SS	0.2	50	50	ENSMUST00000235644.2	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31605330;31634331	31634254;31662140	+	31605330;31639262	31639219;31662140	MXE	0.5	100	100	ENSMUST00000137927.9	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31605330;31634331	31634254;31662812	+	31605330;31662194	31639219;31662812	MXE	0.5	100	100	ENSMUST00000137927.9	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31667425	31678049	+	31667425;31672454	31672376;31678049	ES	0.33	50	50	ENSMUST00000235719.2	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31678979	31680545	+	31678979	31680633	A3SS	0.33	50	50	ENSMUST00000235719.2	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31634331	31662140	+	31634331;31639231	31639219;31662140	ES	0.2	50	50	ENSMUST00000124902.9	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31678979;31679223	31679153;31680545	+	31678979	31680545	cassetteExon	0.5	100	100	ENSMUST00000124902.9	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31692246	31694902	+	31692246	31694899	A3SS	0.5	50	50	ENSMUST00000124902.9	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31639262	31662812	+	31662194	31662812	A5SS&ES	0.25	50	50	ENSMUST00000124902.9	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31652182	31662140	+	31639231	31662140	A5SS	0.2	50	50	ENSMUST00000124902.9	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31679955	31680545	+	31678979	31680545	A5SS	0.25	50	50	ENSMUST00000124902.9	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31678979	31680545	+	31679235	31680545	A5SS	0.25	50	50	ENSMUST00000154567.8	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31672454	31678049	+	31672454	31674028	3pMXE	0.5	50	50	ENSMUST00000141314.8	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31605330;31639231	31639219;31662140	+	31605330;31634331	31633075;31662140	MXE	0.5	100	100	ENSMUST00000141314.8	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31605330;31639262	31639219;31662140	+	31605330;31634331	31633075;31662140	MXE	0.5	100	100	ENSMUST00000141314.8	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31605330;31639262	31639219;31662812	+	31605330;31662194	31633075;31662812	MXE	0.5	100	100	ENSMUST00000141314.8	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31633145;31639231	31639219;31662140	+	31633145;31634331	31634254;31662140	MXE	0.5	100	100	ENSMUST00000141314.8	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31633145;31639262	31639219;31662812	+	31633145;31662194	31634254;31662812	MXE	0.5	100	100	ENSMUST00000141314.8	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31652182	31662140	+	31634331	31662140	A5SS	0.2	50	50	ENSMUST00000141314.8	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31605330	31634254	+	31633145	31634254	5pMXE	0.5	50	50	ENSMUST00000235639.2	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31679955	31680545	+	31679223	31680545	A5SS	0.25	50	50	ENSMUST00000237363.2	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31605330	31662812	+	31662194	31662812	5pMXE	0.25	50	50	ENSMUST00000130547.9	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31634331	31662812	+	31662194	31662812	5pMXE	0.25	50	50	ENSMUST00000130547.9	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31678979	31680545	+	31678979	31679153	3pMXE	0.33	50	50	ENSMUST00000130547.9	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31674102	31678049	+	31667425	31678049	A5SS	0.33	50	50	ENSMUST00000237698.2	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31685442	31689655	+	31688872	31689655	5pMXE	0.5	50	50	ENSMUST00000238006.2	ENSMUSG00000041119.13	Pde9a	chr17	protein_coding	phosphodiesterase 9A
chr17	31721857	31728743	-	31721857;31722640	31722484;31728743	ES	0.2	50	50	ENSMUST00000171171.9	ENSMUSG00000024037.14	Wdr4	chr17	protein_coding	WD repeat domain 4
chr17	31729620	31737792	-	31729620	31731141	5pMXE	0.33	50	50	ENSMUST00000171171.9	ENSMUSG00000024037.14	Wdr4	chr17	protein_coding	WD repeat domain 4
chr17	31729620	31738823	-	31729620	31731141	5pMXE	0.33	50	50	ENSMUST00000171171.9	ENSMUSG00000024037.14	Wdr4	chr17	protein_coding	WD repeat domain 4
chr17	31722625	31728743	-	31722640	31728743	A3SS	0.2	50	50	ENSMUST00000171171.9	ENSMUSG00000024037.14	Wdr4	chr17	protein_coding	WD repeat domain 4
chr17	31722701	31728743	-	31722640	31728743	A3SS	0.2	50	50	ENSMUST00000171171.9	ENSMUSG00000024037.14	Wdr4	chr17	protein_coding	WD repeat domain 4
chr17	31722640	31728795	-	31722640	31728743	A5SS	0.5	50	50	ENSMUST00000171171.9	ENSMUSG00000024037.14	Wdr4	chr17	protein_coding	WD repeat domain 4
chr17	31720249	31728743	-	31720249;31721857	31721745;31728743	ES	0.2	50	50	ENSMUST00000170176.9	ENSMUSG00000024037.14	Wdr4	chr17	protein_coding	WD repeat domain 4
chr17	31721857;31722625	31722484;31728743	-	31721857	31728743	cassetteExon	0.5	100	100	ENSMUST00000170176.9	ENSMUSG00000024037.14	Wdr4	chr17	protein_coding	WD repeat domain 4
chr17	31721857;31722701	31722484;31728743	-	31721857	31728743	cassetteExon	0.5	100	100	ENSMUST00000170176.9	ENSMUSG00000024037.14	Wdr4	chr17	protein_coding	WD repeat domain 4
chr17	31722701	31728795	-	31722640	31728795	A3SS	0.5	50	50	ENSMUST00000172284.9	ENSMUSG00000024037.14	Wdr4	chr17	protein_coding	WD repeat domain 4
chr17	31720249	31728743	-	31720249	31721745	A5SS&ES	0.5	50	50	ENSMUST00000172284.9	ENSMUSG00000024037.14	Wdr4	chr17	protein_coding	WD repeat domain 4
chr17	31721857	31728743	-	31721857	31722484	A5SS&ES	0.5	50	50	ENSMUST00000172284.9	ENSMUSG00000024037.14	Wdr4	chr17	protein_coding	WD repeat domain 4
chr17	31722701	31728743	-	31722625	31728743	A3SS	0.2	50	50	ENSMUST00000236665.2	ENSMUSG00000024037.14	Wdr4	chr17	protein_coding	WD repeat domain 4
chr17	31722625	31728743	-	31720249	31728743	A3SS	0.2	50	50	ENSMUST00000237127.2	ENSMUSG00000024037.14	Wdr4	chr17	protein_coding	WD repeat domain 4
chr17	31722640	31728743	-	31720249	31728743	A3SS	0.2	50	50	ENSMUST00000237127.2	ENSMUSG00000024037.14	Wdr4	chr17	protein_coding	WD repeat domain 4
chr17	31722701	31728743	-	31720249	31728743	A3SS	0.2	50	50	ENSMUST00000237127.2	ENSMUSG00000024037.14	Wdr4	chr17	protein_coding	WD repeat domain 4
chr17	31721857	31728743	-	31722640	31728743	3pMXE	0.2	50	50	ENSMUST00000169224.3	ENSMUSG00000024037.14	Wdr4	chr17	protein_coding	WD repeat domain 4
chr17	31721857	31728743	-	31722701	31728743	3pMXE	0.2	50	50	ENSMUST00000236913.2	ENSMUSG00000024037.14	Wdr4	chr17	protein_coding	WD repeat domain 4
chr17	31722701	31728795	-	31722701	31728743	A5SS	0.5	50	50	ENSMUST00000236913.2	ENSMUSG00000024037.14	Wdr4	chr17	protein_coding	WD repeat domain 4
chr17	31729620	31738823	-	31729620;31737971	31737792;31738823	ES	0.25	50	50	ENSMUST00000171291.2	ENSMUSG00000024037.14	Wdr4	chr17	protein_coding	WD repeat domain 4
chr17	31729620;31731461	31731141;31737792	-	31729620	31737792	cassetteExon	0.5	100	100	ENSMUST00000171291.2	ENSMUSG00000024037.14	Wdr4	chr17	protein_coding	WD repeat domain 4
chr17	31737813	31738823	-	31737971	31738823	A3SS	0.25	50	50	ENSMUST00000171291.2	ENSMUSG00000024037.14	Wdr4	chr17	protein_coding	WD repeat domain 4
chr17	31738043	31738823	-	31737971	31738823	A3SS	0.25	50	50	ENSMUST00000171291.2	ENSMUSG00000024037.14	Wdr4	chr17	protein_coding	WD repeat domain 4
chr17	31738043	31738823	-	31737813	31738823	A3SS	0.25	50	50	ENSMUST00000167419.8	ENSMUSG00000024037.14	Wdr4	chr17	protein_coding	WD repeat domain 4
chr17	31729620;31737813	31737792;31738823	-	31729620	31738823	cassetteExon	0.5	100	100	ENSMUST00000237807.2	ENSMUSG00000024037.14	Wdr4	chr17	protein_coding	WD repeat domain 4
chr17	31729620;31738043	31737792;31738823	-	31729620	31738823	cassetteExon	0.5	100	100	ENSMUST00000237807.2	ENSMUSG00000024037.14	Wdr4	chr17	protein_coding	WD repeat domain 4
chr17	31729620	31737792	-	31731461	31737792	3pMXE	0.5	50	50	ENSMUST00000171592.2	ENSMUSG00000024037.14	Wdr4	chr17	protein_coding	WD repeat domain 4
chr17	31740666	31745776	+	31740666	31750084	A3SS	0.25	50	50	ENSMUST00000064798.16	ENSMUSG00000024038.18	Ndufv3	chr17	protein_coding	NADH:ubiquinone oxidoreductase core subunit V3
chr17	31740666	31746284	+	31740666	31750084	A3SS	0.25	50	50	ENSMUST00000064798.16	ENSMUSG00000024038.18	Ndufv3	chr17	protein_coding	NADH:ubiquinone oxidoreductase core subunit V3
chr17	31740666	31746588	+	31740666	31750084	A3SS	0.25	50	50	ENSMUST00000064798.16	ENSMUSG00000024038.18	Ndufv3	chr17	protein_coding	NADH:ubiquinone oxidoreductase core subunit V3
chr17	31747375	31750084	+	31740666	31750084	A5SS	0.33	50	50	ENSMUST00000064798.16	ENSMUSG00000024038.18	Ndufv3	chr17	protein_coding	NADH:ubiquinone oxidoreductase core subunit V3
chr17	31748535	31750084	+	31740666	31750084	A5SS	0.33	50	50	ENSMUST00000064798.16	ENSMUSG00000024038.18	Ndufv3	chr17	protein_coding	NADH:ubiquinone oxidoreductase core subunit V3
chr17	31740666	31750084	+	31740666;31747375	31746284;31750084	ES	0.33	50	50	ENSMUST00000046288.16	ENSMUSG00000024038.18	Ndufv3	chr17	protein_coding	NADH:ubiquinone oxidoreductase core subunit V3
chr17	31740666	31745776	+	31740666	31746284	A3SS	0.25	50	50	ENSMUST00000046288.16	ENSMUSG00000024038.18	Ndufv3	chr17	protein_coding	NADH:ubiquinone oxidoreductase core subunit V3
chr17	31740666	31746588	+	31740666	31746284	A3SS	0.25	50	50	ENSMUST00000046288.16	ENSMUSG00000024038.18	Ndufv3	chr17	protein_coding	NADH:ubiquinone oxidoreductase core subunit V3
chr17	31748535	31750084	+	31747375	31750084	A5SS	0.33	50	50	ENSMUST00000046288.16	ENSMUSG00000024038.18	Ndufv3	chr17	protein_coding	NADH:ubiquinone oxidoreductase core subunit V3
chr17	31740666	31745776	+	31740666	31746588	A3SS	0.25	50	50	ENSMUST00000189436.3	ENSMUSG00000024038.18	Ndufv3	chr17	protein_coding	NADH:ubiquinone oxidoreductase core subunit V3
chr17	31777443	31777659	+	31776765	31777659	A5SS	0.5	50	50	ENSMUST00000162059.6	ENSMUSG00000013562.13	4833413E03Rik	chr17	lncRNA	RIKEN cDNA 4833413E03 gene
chr17	31807561	31811079	+	31807561;31809748	31809577;31811079	ES	0.33	50	50	ENSMUST00000097352.11	ENSMUSG00000006705.14	Pknox1	chr17	protein_coding	Pbx/knotted 1 homeobox
chr17	31783862;31801016	31800778;31802670	+	31783862	31802670	cassetteExon	0.5	100	100	ENSMUST00000097352.11	ENSMUSG00000006705.14	Pknox1	chr17	protein_coding	Pbx/knotted 1 homeobox
chr17	31783862;31801024	31800778;31802670	+	31783862	31802670	cassetteExon	0.5	100	100	ENSMUST00000097352.11	ENSMUSG00000006705.14	Pknox1	chr17	protein_coding	Pbx/knotted 1 homeobox
chr17	31807561	31809600	+	31807561	31809577	A3SS	0.33	50	50	ENSMUST00000097352.11	ENSMUSG00000006705.14	Pknox1	chr17	protein_coding	Pbx/knotted 1 homeobox
chr17	31811249	31814202	+	31811249	31814199	A3SS	0.5	50	50	ENSMUST00000097352.11	ENSMUSG00000006705.14	Pknox1	chr17	protein_coding	Pbx/knotted 1 homeobox
chr17	31815867	31818495	+	31815867	31818489	A3SS	0.5	50	50	ENSMUST00000097352.11	ENSMUSG00000006705.14	Pknox1	chr17	protein_coding	Pbx/knotted 1 homeobox
chr17	31810812	31811079	+	31809748	31811079	A5SS	0.33	50	50	ENSMUST00000097352.11	ENSMUSG00000006705.14	Pknox1	chr17	protein_coding	Pbx/knotted 1 homeobox
chr17	31801024	31802670	+	31801016	31802670	A5SS	0.33	50	50	ENSMUST00000235869.2	ENSMUSG00000006705.14	Pknox1	chr17	protein_coding	Pbx/knotted 1 homeobox
chr17	31807561;31809748	31809600;31811079	+	31807561	31811079	cassetteExon	0.5	100	100	ENSMUST00000235401.2	ENSMUSG00000006705.14	Pknox1	chr17	protein_coding	Pbx/knotted 1 homeobox
chr17	31810812	31811079	+	31807561	31811079	A5SS	0.33	50	50	ENSMUST00000235401.2	ENSMUSG00000006705.14	Pknox1	chr17	protein_coding	Pbx/knotted 1 homeobox
chr17	31832267	31834448	-	31832267;31833544	31833503;31834448	ES	0.5	50	50	ENSMUST00000236853.2	ENSMUSG00000024039.16	Cbs	chr17	protein_coding	cystathionine beta-synthase
chr17	31844991;31845162	31845127;31846450	-	31844991	31846450	cassetteExon	0.5	100	100	ENSMUST00000236853.2	ENSMUSG00000024039.16	Cbs	chr17	protein_coding	cystathionine beta-synthase
chr17	31852125	31856057	-	31852128	31856057	A3SS	0.5	50	50	ENSMUST00000236853.2	ENSMUSG00000024039.16	Cbs	chr17	protein_coding	cystathionine beta-synthase
chr17	31841492	31841987	-	31841492	31843203	A5SS	0.5	50	50	ENSMUST00000236853.2	ENSMUSG00000024039.16	Cbs	chr17	protein_coding	cystathionine beta-synthase
chr17	31852128	31855404	-	31852128	31856057	A5SS	0.33	50	50	ENSMUST00000236853.2	ENSMUSG00000024039.16	Cbs	chr17	protein_coding	cystathionine beta-synthase
chr17	31852128	31855632	-	31852128	31856057	A5SS	0.33	50	50	ENSMUST00000236853.2	ENSMUSG00000024039.16	Cbs	chr17	protein_coding	cystathionine beta-synthase
chr17	31852125	31855404	-	31852125	31856057	A5SS	0.5	50	50	ENSMUST00000067801.14	ENSMUSG00000024039.16	Cbs	chr17	protein_coding	cystathionine beta-synthase
chr17	31852128	31855404	-	31852128	31855632	A5SS	0.33	50	50	ENSMUST00000155814.8	ENSMUSG00000024039.16	Cbs	chr17	protein_coding	cystathionine beta-synthase
chr17	31852125	31855404	-	31852128	31855404	A3SS	0.5	50	50	ENSMUST00000151718.3	ENSMUSG00000024039.16	Cbs	chr17	protein_coding	cystathionine beta-synthase
chr17	31867868;31870686	31870620;31871476	-	31867868	31871476	cassetteExon	0.5	100	100	ENSMUST00000166526.9	ENSMUSG00000061613.14	U2af1	chr17	protein_coding	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
chr17	31867868;31870686	31870620;31873953	-	31867868;31871542	31871476;31873953	MXE	0.5	100	100	ENSMUST00000166526.9	ENSMUSG00000061613.14	U2af1	chr17	protein_coding	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
chr17	31867868;31870782	31870620;31873953	-	31867868;31871542	31871476;31873953	MXE	0.5	100	100	ENSMUST00000166526.9	ENSMUSG00000061613.14	U2af1	chr17	protein_coding	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
chr17	31867868;31870782	31870743;31873953	-	31867868;31871542	31871476;31873953	MXE	0.5	100	100	ENSMUST00000166526.9	ENSMUSG00000061613.14	U2af1	chr17	protein_coding	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
chr17	31874040	31875302	-	31874040	31877627	A5SS	0.5	50	50	ENSMUST00000166526.9	ENSMUSG00000061613.14	U2af1	chr17	protein_coding	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
chr17	31867868;31870782	31870743;31873953	-	31867868;31870686	31870620;31873953	MXE	0.5	100	100	ENSMUST00000014684.6	ENSMUSG00000061613.14	U2af1	chr17	protein_coding	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
chr17	31870686;31871542	31871476;31873953	-	31870686	31873953	cassetteExon	0.5	100	100	ENSMUST00000014684.6	ENSMUSG00000061613.14	U2af1	chr17	protein_coding	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
chr17	31867868;31870782	31870743;31873953	-	31867868;31871542	31870620;31873953	MXE	0.5	100	100	ENSMUST00000237323.2	ENSMUSG00000061613.14	U2af1	chr17	protein_coding	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
chr17	31874040	31877627	-	31867868	31877627	A3SS	0.5	50	50	ENSMUST00000236475.2	ENSMUSG00000061613.14	U2af1	chr17	protein_coding	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
chr17	31867868	31870620	-	31867868	31877627	A5SS	0.25	50	50	ENSMUST00000236475.2	ENSMUSG00000061613.14	U2af1	chr17	protein_coding	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
chr17	31867868	31870743	-	31867868	31877627	A5SS	0.25	50	50	ENSMUST00000236475.2	ENSMUSG00000061613.14	U2af1	chr17	protein_coding	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
chr17	31867868	31871476	-	31867868	31877627	A5SS	0.25	50	50	ENSMUST00000236475.2	ENSMUSG00000061613.14	U2af1	chr17	protein_coding	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
chr17	31870686	31873953	-	31871542	31873953	3pMXE	0.33	50	50	ENSMUST00000235600.2	ENSMUSG00000061613.14	U2af1	chr17	protein_coding	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
chr17	31870782	31873953	-	31871542	31873953	3pMXE	0.33	50	50	ENSMUST00000235600.2	ENSMUSG00000061613.14	U2af1	chr17	protein_coding	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
chr17	31897163;31897491	31897423;31898533	+	31897163	31898533	cassetteExon	0.5	100	100	ENSMUST00000228716.3	ENSMUSG00000024041.11	Cryaa	chr17	protein_coding	crystallin, alpha A
chr17	31897163;31897509	31897423;31898533	+	31897163	31898533	cassetteExon	0.5	100	100	ENSMUST00000228716.3	ENSMUSG00000024041.11	Cryaa	chr17	protein_coding	crystallin, alpha A
chr17	31897509	31898533	+	31897491	31898533	A5SS	0.33	50	50	ENSMUST00000019192.8	ENSMUSG00000024041.11	Cryaa	chr17	protein_coding	crystallin, alpha A
chr17	31897163	31898533	+	31897163	31897423	3pMXE	0.5	50	50	ENSMUST00000227620.2	ENSMUSG00000024041.11	Cryaa	chr17	protein_coding	crystallin, alpha A
chr17	32008678	32010947	+	32008678	32010970	A3SS	0.5	50	50	ENSMUST00000234022.2	ENSMUSG00000117355.2	Gm49999	chr17	lncRNA	predicted gene, 49999
chr17	32073298	32074646	-	32073298;32074038	32073868;32074646	ES	0.5	50	50	ENSMUST00000024839.6	ENSMUSG00000024042.8	Sik1	chr17	protein_coding	salt inducible kinase 1
chr17	32165785	32226650	-	32165785;32206425	32206322;32226650	ES	0.5	50	50	ENSMUST00000002145.12	ENSMUSG00000002076.13	Hsf2bp	chr17	protein_coding	heat shock transcription factor 2 binding protein
chr17	32230282	32238889	-	32230282	32232292	A5SS&ES	0.5	50	50	ENSMUST00000002145.12	ENSMUSG00000002076.13	Hsf2bp	chr17	protein_coding	heat shock transcription factor 2 binding protein
chr17	32241843	32242074	-	32241843	32252235	A5SS	0.33	50	50	ENSMUST00000002145.12	ENSMUSG00000002076.13	Hsf2bp	chr17	protein_coding	heat shock transcription factor 2 binding protein
chr17	32241843	32242850	-	32241843	32252235	A5SS	0.33	50	50	ENSMUST00000002145.12	ENSMUSG00000002076.13	Hsf2bp	chr17	protein_coding	heat shock transcription factor 2 binding protein
chr17	32241843	32242074	-	32241843	32242850	A5SS	0.33	50	50	ENSMUST00000236321.2	ENSMUSG00000002076.13	Hsf2bp	chr17	protein_coding	heat shock transcription factor 2 binding protein
chr17	32264985	32267527	+	32264985;32266705	32266648;32267527	ES	0.33	50	50	ENSMUST00000081339.13	ENSMUSG00000058392.14	Rrp1b	chr17	protein_coding	ribosomal RNA processing 1B
chr17	32271801	32274079	+	32271801;32272928	32272831;32274079	ES	0.5	50	50	ENSMUST00000081339.13	ENSMUSG00000058392.14	Rrp1b	chr17	protein_coding	ribosomal RNA processing 1B
chr17	32272928	32274885	+	32272928;32274098	32274079;32274885	ES	0.33	50	50	ENSMUST00000081339.13	ENSMUSG00000058392.14	Rrp1b	chr17	protein_coding	ribosomal RNA processing 1B
chr17	32270184	32270604	+	32270184	32270657	A3SS	0.5	50	50	ENSMUST00000081339.13	ENSMUSG00000058392.14	Rrp1b	chr17	protein_coding	ribosomal RNA processing 1B
chr17	32265203	32266648	+	32264985	32266648	A5SS	0.5	50	50	ENSMUST00000081339.13	ENSMUSG00000058392.14	Rrp1b	chr17	protein_coding	ribosomal RNA processing 1B
chr17	32265203	32267527	+	32266705	32267527	A5SS&ES	0.33	50	50	ENSMUST00000081339.13	ENSMUSG00000058392.14	Rrp1b	chr17	protein_coding	ribosomal RNA processing 1B
chr17	32274289	32274885	+	32274098	32274885	A5SS	0.33	50	50	ENSMUST00000081339.13	ENSMUSG00000058392.14	Rrp1b	chr17	protein_coding	ribosomal RNA processing 1B
chr17	32275035	32275530	+	32274971	32275530	A5SS	0.5	50	50	ENSMUST00000081339.13	ENSMUSG00000058392.14	Rrp1b	chr17	protein_coding	ribosomal RNA processing 1B
chr17	32265203;32266705	32266648;32267527	+	32265203	32267527	cassetteExon	0.5	100	100	ENSMUST00000236329.2	ENSMUSG00000058392.14	Rrp1b	chr17	protein_coding	ribosomal RNA processing 1B
chr17	32271801;32274098	32274079;32274885	+	32271801;32272928	32272831;32274885	MXE	0.5	100	100	ENSMUST00000236329.2	ENSMUSG00000058392.14	Rrp1b	chr17	protein_coding	ribosomal RNA processing 1B
chr17	32271801;32274289	32274079;32274885	+	32271801;32272928	32272831;32274885	MXE	0.5	100	100	ENSMUST00000236329.2	ENSMUSG00000058392.14	Rrp1b	chr17	protein_coding	ribosomal RNA processing 1B
chr17	32272928;32274289	32274079;32274885	+	32272928	32274885	cassetteExon	0.5	100	100	ENSMUST00000236329.2	ENSMUSG00000058392.14	Rrp1b	chr17	protein_coding	ribosomal RNA processing 1B
chr17	32264985	32267527	+	32265203	32267527	A5SS	0.33	50	50	ENSMUST00000236329.2	ENSMUSG00000058392.14	Rrp1b	chr17	protein_coding	ribosomal RNA processing 1B
chr17	32264985	32267527	+	32264985	32266648	3pMXE	0.5	50	50	ENSMUST00000156164.2	ENSMUSG00000058392.14	Rrp1b	chr17	protein_coding	ribosomal RNA processing 1B
chr17	32264985	32267527	+	32266705	32267527	A5SS&ES	0.33	50	50	ENSMUST00000238133.2	ENSMUSG00000058392.14	Rrp1b	chr17	protein_coding	ribosomal RNA processing 1B
chr17	32265203	32267527	+	32265203	32266648	3pMXE	0.5	50	50	ENSMUST00000151808.2	ENSMUSG00000058392.14	Rrp1b	chr17	protein_coding	ribosomal RNA processing 1B
chr17	32271801	32274079	+	32271801	32272831	3pMXE	0.5	50	50	ENSMUST00000236425.2	ENSMUSG00000058392.14	Rrp1b	chr17	protein_coding	ribosomal RNA processing 1B
chr17	32300611	32303020	-	32300611;32301589	32301504;32303020	ES	0.5	50	50	ENSMUST00000159650.8	ENSMUSG00000002791.18	Pdxk-ps	chr17	transcribed_unprocessed_pseudogene	pyridoxal (pyridoxine, vitamin B6) kinase, pseudogene
chr17	32303066	32306733	-	32303066;32305082	32305004;32306733	ES	0.5	50	50	ENSMUST00000159650.8	ENSMUSG00000002791.18	Pdxk-ps	chr17	transcribed_unprocessed_pseudogene	pyridoxal (pyridoxine, vitamin B6) kinase, pseudogene
chr17	32297879;32298870	32298755;32300566	-	32297879	32300566	cassetteExon	0.5	100	100	ENSMUST00000159650.8	ENSMUSG00000002791.18	Pdxk-ps	chr17	transcribed_unprocessed_pseudogene	pyridoxal (pyridoxine, vitamin B6) kinase, pseudogene
chr17	32295999	32297736	-	32295999	32297743	A5SS	0.5	50	50	ENSMUST00000159650.8	ENSMUSG00000002791.18	Pdxk-ps	chr17	transcribed_unprocessed_pseudogene	pyridoxal (pyridoxine, vitamin B6) kinase, pseudogene
chr17	32301589	32302996	-	32301589	32303020	A5SS	0.5	50	50	ENSMUST00000159650.8	ENSMUSG00000002791.18	Pdxk-ps	chr17	transcribed_unprocessed_pseudogene	pyridoxal (pyridoxine, vitamin B6) kinase, pseudogene
chr17	32303066	32305015	-	32303066	32305004	A5SS	0.33	50	50	ENSMUST00000159650.8	ENSMUSG00000002791.18	Pdxk-ps	chr17	transcribed_unprocessed_pseudogene	pyridoxal (pyridoxine, vitamin B6) kinase, pseudogene
chr17	32306813	32309159	-	32306813	32309175	A5SS	0.5	50	50	ENSMUST00000159650.8	ENSMUSG00000002791.18	Pdxk-ps	chr17	transcribed_unprocessed_pseudogene	pyridoxal (pyridoxine, vitamin B6) kinase, pseudogene
chr17	32303066	32306733	-	32303066;32305082	32305015;32306733	ES	0.5	50	50	ENSMUST00000160550.9	ENSMUSG00000002791.18	Pdxk-ps	chr17	transcribed_unprocessed_pseudogene	pyridoxal (pyridoxine, vitamin B6) kinase, pseudogene
chr17	32309229	32326062	-	32309229	32319174	5pMXE	0.5	50	50	ENSMUST00000160550.9	ENSMUSG00000002791.18	Pdxk-ps	chr17	transcribed_unprocessed_pseudogene	pyridoxal (pyridoxine, vitamin B6) kinase, pseudogene
chr17	32300611	32303020	-	32300611	32301504	A5SS&ES	0.5	50	50	ENSMUST00000160550.9	ENSMUSG00000002791.18	Pdxk-ps	chr17	transcribed_unprocessed_pseudogene	pyridoxal (pyridoxine, vitamin B6) kinase, pseudogene
chr17	32332984	32349167	+	32332984	32359902	A3SS	0.33	50	50	ENSMUST00000237900.2	ENSMUSG00000097305.3	Gm17276	chr17	lncRNA	predicted gene, 17276
chr17	32332984	32358614	+	32332984	32359902	A3SS	0.33	50	50	ENSMUST00000237900.2	ENSMUSG00000097305.3	Gm17276	chr17	lncRNA	predicted gene, 17276
chr17	32332984	32349167	+	32332984	32358614	A3SS	0.33	50	50	ENSMUST00000180839.3	ENSMUSG00000097305.3	Gm17276	chr17	lncRNA	predicted gene, 17276
chr17	32352702	32354359	-	32352666	32354359	A3SS	0.5	50	50	ENSMUST00000087723.5	ENSMUSG00000038146.9	Notch3	chr17	protein_coding	notch 3
chr17	32407845	32408009	-	32407845	32407988	A5SS	0.5	50	50	ENSMUST00000087721.10	ENSMUSG00000037577.14	Ephx3	chr17	protein_coding	epoxide hydrolase 3
chr17	32448709	32503037	-	32448709;32472174	32471971;32503037	ES	0.5	50	50	ENSMUST00000003726.16	ENSMUSG00000024002.19	Brd4	chr17	protein_coding	bromodomain containing 4
chr17	32472174	32503492	-	32472174	32503037	5pMXE	0.33	50	50	ENSMUST00000003726.16	ENSMUSG00000024002.19	Brd4	chr17	protein_coding	bromodomain containing 4
chr17	32443196;32443960	32443833;32444550	-	32443196	32444550	cassetteExon	0.5	100	100	ENSMUST00000003726.16	ENSMUSG00000024002.19	Brd4	chr17	protein_coding	bromodomain containing 4
chr17	32425967	32430141	-	32421694	32430141	A3SS	0.5	50	50	ENSMUST00000003726.16	ENSMUSG00000024002.19	Brd4	chr17	protein_coding	bromodomain containing 4
chr17	32441139	32443061	-	32441139	32443058	A5SS	0.5	50	50	ENSMUST00000003726.16	ENSMUSG00000024002.19	Brd4	chr17	protein_coding	bromodomain containing 4
chr17	32448709	32472015	-	32448709	32471971	A5SS	0.25	50	50	ENSMUST00000003726.16	ENSMUSG00000024002.19	Brd4	chr17	protein_coding	bromodomain containing 4
chr17	32448709	32502833	-	32448709	32471971	A5SS&ES	0.25	50	50	ENSMUST00000003726.16	ENSMUSG00000024002.19	Brd4	chr17	protein_coding	bromodomain containing 4
chr17	32472174	32491204	-	32472174	32503037	A5SS	0.33	50	50	ENSMUST00000003726.16	ENSMUSG00000024002.19	Brd4	chr17	protein_coding	bromodomain containing 4
chr17	32448709	32503037	-	32448709;32472174	32472015;32503037	ES	0.5	50	50	ENSMUST00000121285.8	ENSMUSG00000024002.19	Brd4	chr17	protein_coding	bromodomain containing 4
chr17	32448709	32502833	-	32448709	32472015	A5SS&ES	0.25	50	50	ENSMUST00000121285.8	ENSMUSG00000024002.19	Brd4	chr17	protein_coding	bromodomain containing 4
chr17	32448709	32503492	-	32448709	32503037	5pMXE	0.2	50	50	ENSMUST00000237692.2	ENSMUSG00000024002.19	Brd4	chr17	protein_coding	bromodomain containing 4
chr17	32448709	32502833	-	32448709	32503037	A5SS	0.2	50	50	ENSMUST00000237692.2	ENSMUSG00000024002.19	Brd4	chr17	protein_coding	bromodomain containing 4
chr17	32448709;32472174	32471971;32503492	-	32448709	32503492	cassetteExon	0.5	100	100	ENSMUST00000127893.8	ENSMUSG00000024002.19	Brd4	chr17	protein_coding	bromodomain containing 4
chr17	32448709;32472174	32472015;32503492	-	32448709	32503492	cassetteExon	0.5	100	100	ENSMUST00000127893.8	ENSMUSG00000024002.19	Brd4	chr17	protein_coding	bromodomain containing 4
chr17	32448709	32502833	-	32448709	32503492	A5SS	0.2	50	50	ENSMUST00000127893.8	ENSMUSG00000024002.19	Brd4	chr17	protein_coding	bromodomain containing 4
chr17	32448709	32503037	-	32448709	32472015	A5SS&ES	0.2	50	50	ENSMUST00000125899.2	ENSMUSG00000024002.19	Brd4	chr17	protein_coding	bromodomain containing 4
chr17	32472174	32491204	-	32472174	32503492	A5SS	0.33	50	50	ENSMUST00000125899.2	ENSMUSG00000024002.19	Brd4	chr17	protein_coding	bromodomain containing 4
chr17	32493201	32502833	-	32448709	32502833	A3SS	0.5	50	50	ENSMUST00000235598.2	ENSMUSG00000024002.19	Brd4	chr17	protein_coding	bromodomain containing 4
chr17	32535641	32536820	-	32535641;32536320	32536041;32536820	ES	0.5	50	50	ENSMUST00000002699.7	ENSMUSG00000024045.7	Akap8	chr17	protein_coding	A kinase (PRKA) anchor protein 8
chr17	32531347;32532236	32532079;32533085	-	32531347	32533085	cassetteExon	0.5	100	100	ENSMUST00000002699.7	ENSMUSG00000024045.7	Akap8	chr17	protein_coding	A kinase (PRKA) anchor protein 8
chr17	32535641	32536838	-	32535641	32536041	A5SS&ES	0.25	50	50	ENSMUST00000002699.7	ENSMUSG00000024045.7	Akap8	chr17	protein_coding	A kinase (PRKA) anchor protein 8
chr17	32537783	32539432	-	32537783	32540059	A5SS	0.25	50	50	ENSMUST00000002699.7	ENSMUSG00000024045.7	Akap8	chr17	protein_coding	A kinase (PRKA) anchor protein 8
chr17	32537783	32539459	-	32537783	32540059	A5SS	0.25	50	50	ENSMUST00000002699.7	ENSMUSG00000024045.7	Akap8	chr17	protein_coding	A kinase (PRKA) anchor protein 8
chr17	32537783	32539881	-	32537783	32540059	A5SS	0.25	50	50	ENSMUST00000002699.7	ENSMUSG00000024045.7	Akap8	chr17	protein_coding	A kinase (PRKA) anchor protein 8
chr17	32535641	32536820	-	32536320	32536820	A3SS	0.5	50	50	ENSMUST00000235205.2	ENSMUSG00000024045.7	Akap8	chr17	protein_coding	A kinase (PRKA) anchor protein 8
chr17	32535641	32537745	-	32536852	32537745	A3SS&ES	0.5	50	50	ENSMUST00000235205.2	ENSMUSG00000024045.7	Akap8	chr17	protein_coding	A kinase (PRKA) anchor protein 8
chr17	32531347	32533085	-	32532236	32533085	A3SS	0.5	50	50	ENSMUST00000237381.2	ENSMUSG00000024045.7	Akap8	chr17	protein_coding	A kinase (PRKA) anchor protein 8
chr17	32535641;32536852	32536820;32537745	-	32535641	32537745	cassetteExon	0.5	100	100	ENSMUST00000235764.2	ENSMUSG00000024045.7	Akap8	chr17	protein_coding	A kinase (PRKA) anchor protein 8
chr17	32535641;32536852	32536838;32537745	-	32535641	32537745	cassetteExon	0.5	100	100	ENSMUST00000235764.2	ENSMUSG00000024045.7	Akap8	chr17	protein_coding	A kinase (PRKA) anchor protein 8
chr17	32535641	32536041	-	32535641	32537745	A5SS	0.25	50	50	ENSMUST00000235764.2	ENSMUSG00000024045.7	Akap8	chr17	protein_coding	A kinase (PRKA) anchor protein 8
chr17	32535641	32536838	-	32535641	32536820	A5SS	0.25	50	50	ENSMUST00000236785.2	ENSMUSG00000024045.7	Akap8	chr17	protein_coding	A kinase (PRKA) anchor protein 8
chr17	32537783	32539881	-	32537783	32539459	5pMXE	0.25	50	50	ENSMUST00000237860.2	ENSMUSG00000024045.7	Akap8	chr17	protein_coding	A kinase (PRKA) anchor protein 8
chr17	32537783	32539432	-	32537783	32539459	A5SS	0.25	50	50	ENSMUST00000237860.2	ENSMUSG00000024045.7	Akap8	chr17	protein_coding	A kinase (PRKA) anchor protein 8
chr17	32537783	32539881	-	32537783	32539432	5pMXE	0.25	50	50	ENSMUST00000236580.2	ENSMUSG00000024045.7	Akap8	chr17	protein_coding	A kinase (PRKA) anchor protein 8
chr17	32540965	32551785	-	32540965;32551583	32551453;32551785	ES	0.5	50	50	ENSMUST00000236039.2	ENSMUSG00000002625.11	Akap8l	chr17	protein_coding	A kinase (PRKA) anchor protein 8-like
chr17	32553670;32554144	32554085;32554537	-	32553670	32554537	cassetteExon	0.5	100	100	ENSMUST00000236039.2	ENSMUSG00000002625.11	Akap8l	chr17	protein_coding	A kinase (PRKA) anchor protein 8-like
chr17	32540995	32551453	-	32540965	32551453	A3SS	0.5	50	50	ENSMUST00000236039.2	ENSMUSG00000002625.11	Akap8l	chr17	protein_coding	A kinase (PRKA) anchor protein 8-like
chr17	32555712	32557431	-	32555712	32557245	A5SS	0.5	50	50	ENSMUST00000236039.2	ENSMUSG00000002625.11	Akap8l	chr17	protein_coding	A kinase (PRKA) anchor protein 8-like
chr17	32552118;32552954	32552880;32553562	-	32552118	32553562	cassetteExon	0.5	100	100	ENSMUST00000050214.9	ENSMUSG00000002625.11	Akap8l	chr17	protein_coding	A kinase (PRKA) anchor protein 8-like
chr17	32552118;32553019	32552880;32553562	-	32552118	32553562	cassetteExon	0.5	100	100	ENSMUST00000050214.9	ENSMUSG00000002625.11	Akap8l	chr17	protein_coding	A kinase (PRKA) anchor protein 8-like
chr17	32555712	32557431	-	32555712;32557328	32557245;32557431	ES	0.5	50	50	ENSMUST00000236503.2	ENSMUSG00000002625.11	Akap8l	chr17	protein_coding	A kinase (PRKA) anchor protein 8-like
chr17	32552954	32553562	-	32553019	32553562	A3SS	0.33	50	50	ENSMUST00000235614.2	ENSMUSG00000002625.11	Akap8l	chr17	protein_coding	A kinase (PRKA) anchor protein 8-like
chr17	32540965	32551785	-	32551583	32551785	3pMXE	0.5	50	50	ENSMUST00000236618.2	ENSMUSG00000002625.11	Akap8l	chr17	protein_coding	A kinase (PRKA) anchor protein 8-like
chr17	32552118	32553562	-	32552118	32552880	5pMXE	0.5	50	50	ENSMUST00000236618.2	ENSMUSG00000002625.11	Akap8l	chr17	protein_coding	A kinase (PRKA) anchor protein 8-like
chr17	32606791	32607792	-	32606791	32607578	5pMXE	0.25	50	50	ENSMUST00000170617.8	ENSMUSG00000024050.19	Wiz	chr17	protein_coding	widely-interspaced zinc finger motifs
chr17	32606791	32608234	-	32606791	32607578	5pMXE	0.25	50	50	ENSMUST00000170617.8	ENSMUSG00000024050.19	Wiz	chr17	protein_coding	widely-interspaced zinc finger motifs
chr17	32578468;32579401	32579012;32580435	-	32578468	32580435	cassetteExon	0.5	100	100	ENSMUST00000170617.8	ENSMUSG00000024050.19	Wiz	chr17	protein_coding	widely-interspaced zinc finger motifs
chr17	32580938;32581937	32581767;32586798	-	32580938	32586798	cassetteExon	0.5	100	100	ENSMUST00000170617.8	ENSMUSG00000024050.19	Wiz	chr17	protein_coding	widely-interspaced zinc finger motifs
chr17	32576958	32577917	-	32576955	32577917	A3SS	0.5	50	50	ENSMUST00000170617.8	ENSMUSG00000024050.19	Wiz	chr17	protein_coding	widely-interspaced zinc finger motifs
chr17	32587121	32600058	-	32587121	32588261	A5SS&ES	0.33	50	50	ENSMUST00000170617.8	ENSMUSG00000024050.19	Wiz	chr17	protein_coding	widely-interspaced zinc finger motifs
chr17	32588394	32595490	-	32588394	32595497	A5SS	0.5	50	50	ENSMUST00000170617.8	ENSMUSG00000024050.19	Wiz	chr17	protein_coding	widely-interspaced zinc finger motifs
chr17	32597472	32600058	-	32597472	32597814	A5SS&ES	0.33	50	50	ENSMUST00000170617.8	ENSMUSG00000024050.19	Wiz	chr17	protein_coding	widely-interspaced zinc finger motifs
chr17	32598092	32600058	-	32598092	32600030	A5SS	0.5	50	50	ENSMUST00000170617.8	ENSMUSG00000024050.19	Wiz	chr17	protein_coding	widely-interspaced zinc finger motifs
chr17	32606791	32607413	-	32606791	32607578	A5SS	0.25	50	50	ENSMUST00000170617.8	ENSMUSG00000024050.19	Wiz	chr17	protein_coding	widely-interspaced zinc finger motifs
chr17	32587121;32600130	32600058;32606547	-	32587121	32606547	cassetteExon	0.5	100	100	ENSMUST00000087703.12	ENSMUSG00000024050.19	Wiz	chr17	protein_coding	widely-interspaced zinc finger motifs
chr17	32597472	32606547	-	32587121	32606547	A3SS	0.33	50	50	ENSMUST00000087703.12	ENSMUSG00000024050.19	Wiz	chr17	protein_coding	widely-interspaced zinc finger motifs
chr17	32587121	32588261	-	32587121	32606547	A5SS	0.33	50	50	ENSMUST00000087703.12	ENSMUSG00000024050.19	Wiz	chr17	protein_coding	widely-interspaced zinc finger motifs
chr17	32606791;32607729	32607413;32608234	-	32606791	32608234	cassetteExon	0.5	100	100	ENSMUST00000163107.9	ENSMUSG00000024050.19	Wiz	chr17	protein_coding	widely-interspaced zinc finger motifs
chr17	32606791;32607729	32607578;32608234	-	32606791	32608234	cassetteExon	0.5	100	100	ENSMUST00000163107.9	ENSMUSG00000024050.19	Wiz	chr17	protein_coding	widely-interspaced zinc finger motifs
chr17	32597472	32600058	-	32587121	32600058	A3SS	0.33	50	50	ENSMUST00000163107.9	ENSMUSG00000024050.19	Wiz	chr17	protein_coding	widely-interspaced zinc finger motifs
chr17	32597472	32606547	-	32600130	32606547	A3SS&ES	0.33	50	50	ENSMUST00000163107.9	ENSMUSG00000024050.19	Wiz	chr17	protein_coding	widely-interspaced zinc finger motifs
chr17	32598092	32600058	-	32587121	32600058	A3SS	0.33	50	50	ENSMUST00000163107.9	ENSMUSG00000024050.19	Wiz	chr17	protein_coding	widely-interspaced zinc finger motifs
chr17	32581937	32583156	-	32581937	32586798	A5SS	0.5	50	50	ENSMUST00000163107.9	ENSMUSG00000024050.19	Wiz	chr17	protein_coding	widely-interspaced zinc finger motifs
chr17	32606791	32607792	-	32606791	32608234	A5SS	0.25	50	50	ENSMUST00000163107.9	ENSMUSG00000024050.19	Wiz	chr17	protein_coding	widely-interspaced zinc finger motifs
chr17	32597472	32606547	-	32597472;32600130	32600058;32606547	ES	0.33	50	50	ENSMUST00000236409.2	ENSMUSG00000024050.19	Wiz	chr17	protein_coding	widely-interspaced zinc finger motifs
chr17	32597472;32598092	32597814;32600058	-	32597472	32600058	cassetteExon	0.5	100	100	ENSMUST00000236409.2	ENSMUSG00000024050.19	Wiz	chr17	protein_coding	widely-interspaced zinc finger motifs
chr17	32606791	32607792	-	32606791	32607413	5pMXE	0.25	50	50	ENSMUST00000165912.8	ENSMUSG00000024050.19	Wiz	chr17	protein_coding	widely-interspaced zinc finger motifs
chr17	32606791	32608234	-	32606791	32607413	5pMXE	0.25	50	50	ENSMUST00000165912.8	ENSMUSG00000024050.19	Wiz	chr17	protein_coding	widely-interspaced zinc finger motifs
chr17	32597472	32597814	-	32597472	32606547	A5SS	0.33	50	50	ENSMUST00000238144.2	ENSMUSG00000024050.19	Wiz	chr17	protein_coding	widely-interspaced zinc finger motifs
chr17	32618403;32621481	32621410;32622030	-	32618403	32622030	cassetteExon	0.5	100	100	ENSMUST00000063824.14	ENSMUSG00000052142.16	Rasal3	chr17	protein_coding	RAS protein activator like 3
chr17	32613248	32614086	-	32613248	32614049	A5SS	0.5	50	50	ENSMUST00000063824.14	ENSMUSG00000052142.16	Rasal3	chr17	protein_coding	RAS protein activator like 3
chr17	32615875	32621982	+	32615875	32622091	A3SS	0.5	50	50	ENSMUST00000237668.2	ENSMUSG00000117872.2	A530088E08Rik	chr17	lncRNA	RIKEN cDNA A530088E08 gene
chr17	32632448	32635852	-	32632448;32635077	32634780;32635852	ES	0.5	50	50	ENSMUST00000236386.2	ENSMUSG00000079563.11	Pglyrp2	chr17	protein_coding	peptidoglycan recognition protein 2
chr17	32635077	32635881	-	32635077	32635852	A5SS	0.33	50	50	ENSMUST00000236386.2	ENSMUSG00000079563.11	Pglyrp2	chr17	protein_coding	peptidoglycan recognition protein 2
chr17	32635077	32637082	-	32635077	32635852	A5SS&ES	0.33	50	50	ENSMUST00000236386.2	ENSMUSG00000079563.11	Pglyrp2	chr17	protein_coding	peptidoglycan recognition protein 2
chr17	32636062	32637082	-	32636062	32636955	A5SS	0.5	50	50	ENSMUST00000236386.2	ENSMUSG00000079563.11	Pglyrp2	chr17	protein_coding	peptidoglycan recognition protein 2
chr17	32635077	32637082	-	32635077;32636062	32635852;32637082	ES	0.5	50	50	ENSMUST00000237082.2	ENSMUSG00000079563.11	Pglyrp2	chr17	protein_coding	peptidoglycan recognition protein 2
chr17	32632448;32636062	32635852;32637082	-	32632448;32635077	32634780;32637082	MXE	0.5	100	100	ENSMUST00000237165.2	ENSMUSG00000079563.11	Pglyrp2	chr17	protein_coding	peptidoglycan recognition protein 2
chr17	32635077;32636062	32635881;32637082	-	32635077	32637082	cassetteExon	0.5	100	100	ENSMUST00000237165.2	ENSMUSG00000079563.11	Pglyrp2	chr17	protein_coding	peptidoglycan recognition protein 2
chr17	32632448	32635852	-	32632448	32634780	A5SS&ES	0.5	50	50	ENSMUST00000114455.3	ENSMUSG00000079563.11	Pglyrp2	chr17	protein_coding	peptidoglycan recognition protein 2
chr17	32635077	32637082	-	32635077	32635881	A5SS&ES	0.33	50	50	ENSMUST00000114455.3	ENSMUSG00000079563.11	Pglyrp2	chr17	protein_coding	peptidoglycan recognition protein 2
chr17	32671770	32687435	+	32671770;32684555	32684453;32687435	ES	0.5	50	50	ENSMUST00000237491.2	ENSMUSG00000061126.6	Cyp4f39	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 39
chr17	32697318	32700048	+	32689922	32700048	A5SS	0.5	50	50	ENSMUST00000237491.2	ENSMUSG00000061126.6	Cyp4f39	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 39
chr17	32725552	32725868	+	32725138	32725868	A5SS	0.5	50	50	ENSMUST00000237003.2	ENSMUSG00000091586.3	Cyp4f17	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 17
chr17	32756170	32761712	+	32756170;32759389	32759245;32761712	ES	0.5	50	50	ENSMUST00000169591.8	ENSMUSG00000048440.17	Cyp4f16	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 16
chr17	32765733;32766491	32766440;32769227	+	32765733	32769227	cassetteExon	0.5	100	100	ENSMUST00000169591.8	ENSMUSG00000048440.17	Cyp4f16	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 16
chr17	32755629	32755972	+	32755629	32755969	A3SS	0.5	50	50	ENSMUST00000169591.8	ENSMUSG00000048440.17	Cyp4f16	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 16
chr17	32763203	32763305	+	32763203	32763857	A3SS	0.5	50	50	ENSMUST00000169591.8	ENSMUSG00000048440.17	Cyp4f16	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 16
chr17	32756170	32761851	+	32756170;32761765	32761712;32761851	ES	0.5	50	50	ENSMUST00000165515.8	ENSMUSG00000048440.17	Cyp4f16	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 16
chr17	32756170	32759245	+	32756170	32761851	A3SS	0.33	50	50	ENSMUST00000237245.2	ENSMUSG00000048440.17	Cyp4f16	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 16
chr17	32756170	32761712	+	32756170	32759245	3pMXE	0.33	50	50	ENSMUST00000164628.2	ENSMUSG00000048440.17	Cyp4f16	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 16
chr17	32919308	32920878	+	32919308	32920857	A3SS	0.5	50	50	ENSMUST00000168171.8	ENSMUSG00000073424.10	Cyp4f15	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 15
chr17	32905231	32916747	+	32905231	32909618	3pMXE	0.5	50	50	ENSMUST00000167789.8	ENSMUSG00000073424.10	Cyp4f15	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 15
chr17	32914369	32916747	+	32905231	32916747	A5SS	0.5	50	50	ENSMUST00000163907.2	ENSMUSG00000073424.10	Cyp4f15	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 15
chr17	32996191	33007112	-	32996191;32996501	32996375;33007112	ES	0.5	50	50	ENSMUST00000159086.10	ENSMUSG00000024298.16	Zfp871	chr17	protein_coding	zinc finger protein 871
chr17	32996501	33006257	-	32996501	33007112	A5SS	0.5	50	50	ENSMUST00000159086.10	ENSMUSG00000024298.16	Zfp871	chr17	protein_coding	zinc finger protein 871
chr17	33017847	33019342	-	33017847	33019361	A5SS	0.5	50	50	ENSMUST00000200914.5	ENSMUSG00000055202.12	Zfp811	chr17	protein_coding	zinc finger protein 811
chr17	33040101	33040752	-	33040073	33040752	A3SS	0.5	50	50	ENSMUST00000202988.4	ENSMUSG00000095253.5	Zfp799	chr17	protein_coding	zinc finger protein 799
chr17	33040812	33041042	-	33040812	33041048	A5SS	0.5	50	50	ENSMUST00000202988.4	ENSMUSG00000095253.5	Zfp799	chr17	protein_coding	zinc finger protein 799
chr17	33081186	33083589	+	33081186	33084096	A3SS	0.5	50	50	ENSMUST00000234935.2	ENSMUSG00000117373.2	Gm18273	chr17	transcribed_unprocessed_pseudogene	predicted gene, 18273
chr17	33103139	33104931	-	33103139;33104737	33104677;33104931	ES	0.5	50	50	ENSMUST00000228075.3	ENSMUSG00000095325.4	Zfp870	chr17	protein_coding	zinc finger protein 870
chr17	33105057;33109385	33109268;33110415	-	33105057	33110415	cassetteExon	0.5	100	100	ENSMUST00000228075.3	ENSMUSG00000095325.4	Zfp870	chr17	protein_coding	zinc finger protein 870
chr17	33135863	33136277	-	33135860	33136277	A3SS	0.5	50	50	ENSMUST00000235058.2	ENSMUSG00000024292.16	Cyp4f14	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 14
chr17	33135860	33136119	-	33135860	33136277	A5SS	0.5	50	50	ENSMUST00000235058.2	ENSMUSG00000024292.16	Cyp4f14	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 14
chr17	33135860	33136119	-	33135863	33136119	A3SS	0.5	50	50	ENSMUST00000179434.8	ENSMUSG00000024292.16	Cyp4f14	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 14
chr17	33135863	33136277	-	33135863	33136119	A5SS	0.5	50	50	ENSMUST00000179434.8	ENSMUSG00000024292.16	Cyp4f14	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 14
chr17	33149636	33151603	-	33149636;33151514	33151387;33151603	ES	0.5	50	50	ENSMUST00000075253.13	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33151656	33165779	-	33151656;33160174	33160030;33165779	ES	0.25	50	50	ENSMUST00000075253.13	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33160174	33166287	-	33160174;33165977	33165779;33166287	ES	0.5	50	50	ENSMUST00000075253.13	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33151656;33157181	33157046;33160030	-	33151656	33160030	cassetteExon	0.5	100	100	ENSMUST00000075253.13	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33165564	33165779	-	33160174	33165779	A3SS	0.25	50	50	ENSMUST00000075253.13	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33160174	33165763	-	33160174	33165779	A5SS	0.33	50	50	ENSMUST00000075253.13	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33165977	33166310	-	33165977	33166287	A5SS	0.5	50	50	ENSMUST00000075253.13	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33149636;33151656	33151387;33165779	-	33149636	33165779	cassetteExon	0.5	100	100	ENSMUST00000139353.8	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33149636;33151656	33151603;33165779	-	33149636	33165779	cassetteExon	0.5	100	100	ENSMUST00000139353.8	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33149636;33160174	33160030;33165779	-	33149636	33165779	cassetteExon	0.5	100	100	ENSMUST00000139353.8	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33149636;33160174	33160030;33166287	-	33149636;33165977	33165779;33166287	MXE	0.5	100	100	ENSMUST00000139353.8	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33165564	33165779	-	33149636	33165779	A3SS	0.25	50	50	ENSMUST00000139353.8	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33149636;33151656	33151387;33160030	-	33149636	33160030	cassetteExon	0.5	100	100	ENSMUST00000137222.8	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33149636;33151656	33151603;33160030	-	33149636	33160030	cassetteExon	0.5	100	100	ENSMUST00000137222.8	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33149636;33151656	33151387;33165779	-	33149636;33160174	33160030;33165779	MXE	0.5	100	100	ENSMUST00000137222.8	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33149636;33151656	33151603;33165779	-	33149636;33160174	33160030;33165779	MXE	0.5	100	100	ENSMUST00000137222.8	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33157181	33160030	-	33149636	33160030	A3SS	0.33	50	50	ENSMUST00000137222.8	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33160174	33166287	-	33160174	33165779	A5SS&ES	0.33	50	50	ENSMUST00000137222.8	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33149636;33160174	33160030;33166287	-	33149636;33165977	33151603;33166287	MXE	0.5	100	100	ENSMUST00000234946.2	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33151656;33160174	33160030;33166287	-	33151656;33165977	33165779;33166287	MXE	0.5	100	100	ENSMUST00000234946.2	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33165564	33165779	-	33151656	33165779	A3SS	0.25	50	50	ENSMUST00000234946.2	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33151656	33157046	-	33151656	33165779	A5SS	0.33	50	50	ENSMUST00000234946.2	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33149636;33165977	33165779;33166287	-	33149636;33160174	33151387;33166287	MXE	0.5	100	100	ENSMUST00000234083.2	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33160174;33165977	33165763;33166287	-	33160174	33166287	cassetteExon	0.5	100	100	ENSMUST00000234083.2	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33149636;33160174	33160030;33166287	-	33149636;33165977	33151387;33166287	MXE	0.5	100	100	ENSMUST00000234683.2	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33149636	33151603	-	33151514	33151603	3pMXE	0.5	50	50	ENSMUST00000141325.2	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33149636	33160030	-	33151656	33160030	3pMXE	0.33	50	50	ENSMUST00000145683.2	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33151656	33165779	-	33151656	33160030	A5SS&ES	0.33	50	50	ENSMUST00000145683.2	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33151656	33160030	-	33157181	33160030	3pMXE	0.33	50	50	ENSMUST00000234532.2	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33149636	33165779	-	33160174	33165779	3pMXE	0.25	50	50	ENSMUST00000146718.2	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33151656	33165779	-	33160174	33165779	3pMXE	0.25	50	50	ENSMUST00000146718.2	ENSMUSG00000024055.16	Cyp4f13	chr17	protein_coding	cytochrome P450, family 4, subfamily f, polypeptide 13
chr17	33176848	33179549	-	33170794	33179549	A3SS	0.5	50	50	ENSMUST00000234360.2	ENSMUSG00000024295.10	Cyp4f41-ps	chr17	transcribed_unprocessed_pseudogene	cytochrome P450, family 4, subfamily f, polypeptide 41 pseudogene
chr17	33176848	33184640	-	33179751	33184640	A3SS&ES	0.5	50	50	ENSMUST00000234360.2	ENSMUSG00000024295.10	Cyp4f41-ps	chr17	transcribed_unprocessed_pseudogene	cytochrome P450, family 4, subfamily f, polypeptide 41 pseudogene
chr17	33170794	33171355	-	33170794	33179549	A5SS	0.5	50	50	ENSMUST00000234360.2	ENSMUSG00000024295.10	Cyp4f41-ps	chr17	transcribed_unprocessed_pseudogene	cytochrome P450, family 4, subfamily f, polypeptide 41 pseudogene
chr17	33179751	33184644	-	33179751	33184640	A5SS	0.5	50	50	ENSMUST00000234360.2	ENSMUSG00000024295.10	Cyp4f41-ps	chr17	transcribed_unprocessed_pseudogene	cytochrome P450, family 4, subfamily f, polypeptide 41 pseudogene
chr17	33175277	33176509	-	33175277	33176623	A5SS	0.5	50	50	ENSMUST00000234619.2	ENSMUSG00000024295.10	Cyp4f41-ps	chr17	transcribed_unprocessed_pseudogene	cytochrome P450, family 4, subfamily f, polypeptide 41 pseudogene
chr17	33176848	33184640	-	33176848	33179549	A5SS&ES	0.5	50	50	ENSMUST00000234619.2	ENSMUSG00000024295.10	Cyp4f41-ps	chr17	transcribed_unprocessed_pseudogene	cytochrome P450, family 4, subfamily f, polypeptide 41 pseudogene
chr17	33176848	33184640	-	33176848;33179751	33179549;33184640	ES	0.5	50	50	ENSMUST00000234274.2	ENSMUSG00000024295.10	Cyp4f41-ps	chr17	transcribed_unprocessed_pseudogene	cytochrome P450, family 4, subfamily f, polypeptide 41 pseudogene
chr17	33184903;33190699	33190587;33194888	+	33184903	33194888	cassetteExon	0.5	100	100	ENSMUST00000039132.9	ENSMUSG00000053600.9	Zfp472	chr17	protein_coding	zinc finger protein 472
chr17	33212232	33220598	+	33212232	33215466	3pMXE	0.33	50	50	ENSMUST00000129057.2	ENSMUSG00000053390.17	Zfp952	chr17	protein_coding	zinc finger protein 952
chr17	33212232	33213529	+	33212232	33215466	A3SS	0.33	50	50	ENSMUST00000129057.2	ENSMUSG00000053390.17	Zfp952	chr17	protein_coding	zinc finger protein 952
chr17	33220992	33221732	+	33220992;33221606	33221497;33221732	ES	0.5	50	50	ENSMUST00000141815.3	ENSMUSG00000053390.17	Zfp952	chr17	protein_coding	zinc finger protein 952
chr17	33212232;33213677	33213529;33220598	+	33212232	33220598	cassetteExon	0.5	100	100	ENSMUST00000141815.3	ENSMUSG00000053390.17	Zfp952	chr17	protein_coding	zinc finger protein 952
chr17	33240806	33251993	-	33240806	33252256	A5SS	0.5	50	50	ENSMUST00000087654.5	ENSMUSG00000067430.8	Zfp763	chr17	protein_coding	zinc finger protein 763
chr17	33308662	33321205	+	33308453	33321205	A5SS	0.33	50	50	ENSMUST00000131722.9	ENSMUSG00000067424.14	Zfp563	chr17	protein_coding	zinc finger protein 563
chr17	33311566	33321205	+	33308453	33321205	A5SS	0.33	50	50	ENSMUST00000131722.9	ENSMUSG00000067424.14	Zfp563	chr17	protein_coding	zinc finger protein 563
chr17	33311566	33321205	+	33308662	33321205	A5SS	0.33	50	50	ENSMUST00000153072.8	ENSMUSG00000067424.14	Zfp563	chr17	protein_coding	zinc finger protein 563
chr17	33357796	33358181	-	33334270	33358181	A3SS	0.5	50	50	ENSMUST00000234062.2	ENSMUSG00000048602.10	Morc2b	chr17	protein_coding	microrchidia 2B
chr17	33387907	33395379	+	33387907	33395462	A3SS	0.5	50	50	ENSMUST00000214891.2	ENSMUSG00000094891.3	Olfr55	chr17	protein_coding	olfactory receptor 55
chr17	33410592	33418108	+	33410592	33418025	A3SS	0.5	50	50	ENSMUST00000214406.2	ENSMUSG00000093884.3	Olfr239	chr17	protein_coding	olfactory receptor 239
chr17	33435327	33439591	-	33435327;33438912	33438777;33439591	ES	0.5	50	50	ENSMUST00000213751.2	ENSMUSG00000096169.4	Olfr1564	chr17	protein_coding	olfactory receptor 1564
chr17	33439687	33440600	-	33439697	33440600	A3SS	0.33	50	50	ENSMUST00000213751.2	ENSMUSG00000096169.4	Olfr1564	chr17	protein_coding	olfactory receptor 1564
chr17	33435327;33439687	33439591;33440600	-	33435327	33440600	cassetteExon	0.5	100	100	ENSMUST00000208645.3	ENSMUSG00000096169.4	Olfr1564	chr17	protein_coding	olfactory receptor 1564
chr17	33435327;33439697	33439591;33440600	-	33435327	33440600	cassetteExon	0.5	100	100	ENSMUST00000208645.3	ENSMUSG00000096169.4	Olfr1564	chr17	protein_coding	olfactory receptor 1564
chr17	33435327	33438777	-	33435327	33440600	A5SS	0.33	50	50	ENSMUST00000208645.3	ENSMUSG00000096169.4	Olfr1564	chr17	protein_coding	olfactory receptor 1564
chr17	33483742	33487689	+	33483742	33487755	A3SS	0.5	50	50	ENSMUST00000215466.2	ENSMUSG00000054666.8	Olfr63	chr17	protein_coding	olfactory receptor 63
chr17	33555483	33577708	-	33555483;33555822	33555696;33577708	ES	0.33	50	50	ENSMUST00000054072.9	ENSMUSG00000003929.12	Zfp81	chr17	protein_coding	zinc finger protein 81
chr17	33555822;33557225	33557075;33577708	-	33555822	33577708	cassetteExon	0.5	100	100	ENSMUST00000054072.9	ENSMUSG00000003929.12	Zfp81	chr17	protein_coding	zinc finger protein 81
chr17	33557225	33577708	-	33555483	33577708	A3SS	0.33	50	50	ENSMUST00000234016.2	ENSMUSG00000003929.12	Zfp81	chr17	protein_coding	zinc finger protein 81
chr17	33605785	33613214	-	33605785;33612986	33612761;33613214	ES	0.5	50	50	ENSMUST00000173151.8	ENSMUSG00000055240.18	Zfp101	chr17	protein_coding	zinc finger protein 101
chr17	33601560	33605396	-	33589507	33605396	A3SS	0.33	50	50	ENSMUST00000173151.8	ENSMUSG00000055240.18	Zfp101	chr17	protein_coding	zinc finger protein 101
chr17	33604742	33605396	-	33589507	33605396	A3SS	0.33	50	50	ENSMUST00000173151.8	ENSMUSG00000055240.18	Zfp101	chr17	protein_coding	zinc finger protein 101
chr17	33604742	33605396	-	33601560	33605396	A3SS	0.33	50	50	ENSMUST00000167107.10	ENSMUSG00000055240.18	Zfp101	chr17	protein_coding	zinc finger protein 101
chr17	33605785	33612761	-	33605785	33613462	A5SS	0.33	50	50	ENSMUST00000167107.10	ENSMUSG00000055240.18	Zfp101	chr17	protein_coding	zinc finger protein 101
chr17	33605785	33613214	-	33605785	33613462	A5SS	0.33	50	50	ENSMUST00000167107.10	ENSMUSG00000055240.18	Zfp101	chr17	protein_coding	zinc finger protein 101
chr17	33762279	33762846	+	33762279;33762755	33762610;33762846	ES	0.5	50	50	ENSMUST00000173931.8	ENSMUSG00000024299.18	Adamts10	chr17	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10
chr17	33764031	33764516	+	33764031;33764411	33764278;33764516	ES	0.5	50	50	ENSMUST00000173931.8	ENSMUSG00000024299.18	Adamts10	chr17	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10
chr17	33750771	33756066	+	33750771	33756061	A3SS	0.5	50	50	ENSMUST00000173931.8	ENSMUSG00000024299.18	Adamts10	chr17	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10
chr17	33756398	33756753	+	33756398	33756874	A3SS	0.5	50	50	ENSMUST00000173931.8	ENSMUSG00000024299.18	Adamts10	chr17	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10
chr17	33768359	33768458	+	33768359	33768454	A3SS	0.5	50	50	ENSMUST00000173931.8	ENSMUSG00000024299.18	Adamts10	chr17	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10
chr17	33770164	33770226	+	33770164	33770242	A3SS	0.5	50	50	ENSMUST00000173931.8	ENSMUSG00000024299.18	Adamts10	chr17	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10
chr17	33747802	33749107	+	33748000	33749107	A5SS	0.5	50	50	ENSMUST00000173931.8	ENSMUSG00000024299.18	Adamts10	chr17	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10
chr17	33757675	33762172	+	33757669	33762172	A5SS	0.33	50	50	ENSMUST00000173931.8	ENSMUSG00000024299.18	Adamts10	chr17	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10
chr17	33757686	33762172	+	33757669	33762172	A5SS	0.33	50	50	ENSMUST00000173931.8	ENSMUSG00000024299.18	Adamts10	chr17	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10
chr17	33756301	33757238	+	33757147	33757238	A5SS&ES	0.5	50	50	ENSMUST00000087623.13	ENSMUSG00000024299.18	Adamts10	chr17	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10
chr17	33757675	33762172	+	33757686	33762172	A5SS	0.33	50	50	ENSMUST00000087623.13	ENSMUSG00000024299.18	Adamts10	chr17	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10
chr17	33762279	33762846	+	33762755	33762846	5pMXE	0.5	50	50	ENSMUST00000174666.2	ENSMUSG00000024299.18	Adamts10	chr17	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10
chr17	33794902	33795587	+	33794902;33795497	33795408;33795587	ES	0.5	50	50	ENSMUST00000087605.13	ENSMUSG00000024300.18	Myo1f	chr17	protein_coding	myosin IF
chr17	33817297	33820025	+	33817286	33820025	A5SS	0.5	50	50	ENSMUST00000087605.13	ENSMUSG00000024300.18	Myo1f	chr17	protein_coding	myosin IF
chr17	33848190	33848771	+	33848190;33848672	33848596;33848771	ES	0.5	50	50	ENSMUST00000166627.8	ENSMUSG00000073423.11	Zfp414	chr17	protein_coding	zinc finger protein 414
chr17	33850437	33859438	+	33850437	33850516	3pMXE	0.5	50	50	ENSMUST00000166627.8	ENSMUSG00000073423.11	Zfp414	chr17	protein_coding	zinc finger protein 414
chr17	33848190	33848755	+	33848190	33848596	A3SS&ES	0.33	50	50	ENSMUST00000166627.8	ENSMUSG00000073423.11	Zfp414	chr17	protein_coding	zinc finger protein 414
chr17	33848672	33848744	+	33848672	33848771	A3SS	0.5	50	50	ENSMUST00000166627.8	ENSMUSG00000073423.11	Zfp414	chr17	protein_coding	zinc finger protein 414
chr17	33848190	33848755	+	33848190	33848771	A3SS	0.33	50	50	ENSMUST00000073570.12	ENSMUSG00000073423.11	Zfp414	chr17	protein_coding	zinc finger protein 414
chr17	33848190	33848771	+	33848672	33848771	5pMXE	0.5	50	50	ENSMUST00000165504.2	ENSMUSG00000073423.11	Zfp414	chr17	protein_coding	zinc finger protein 414
chr17	33857151	33859438	+	33850437	33859438	A5SS	0.33	50	50	ENSMUST00000163245.2	ENSMUSG00000092412.2	Gm20507	chr17	lncRNA	predicted gene 20507
chr17	33857186	33859438	+	33850437	33859438	A5SS	0.33	50	50	ENSMUST00000163245.2	ENSMUSG00000092412.2	Gm20507	chr17	lncRNA	predicted gene 20507
chr17	33857186	33859438	+	33857151	33859438	A5SS	0.33	50	50	ENSMUST00000052079.8	ENSMUSG00000032739.17	Pram1	chr17	protein_coding	PML-RAR alpha-regulated adaptor molecule 1
chr17	33888150	33896248	-	33888150;33889107	33889055;33896248	ES	0.33	50	50	ENSMUST00000148178.8	ENSMUSG00000059208.16	Hnrnpm	chr17	protein_coding	heterogeneous nuclear ribonucleoprotein M
chr17	33865719	33867787	-	33865633	33867787	A3SS	0.5	50	50	ENSMUST00000148178.8	ENSMUSG00000059208.16	Hnrnpm	chr17	protein_coding	heterogeneous nuclear ribonucleoprotein M
chr17	33865633	33867612	-	33865633	33867787	A5SS	0.5	50	50	ENSMUST00000148178.8	ENSMUSG00000059208.16	Hnrnpm	chr17	protein_coding	heterogeneous nuclear ribonucleoprotein M
chr17	33877439	33877874	-	33877439	33877844	A5SS	0.5	50	50	ENSMUST00000148178.8	ENSMUSG00000059208.16	Hnrnpm	chr17	protein_coding	heterogeneous nuclear ribonucleoprotein M
chr17	33884619	33885621	-	33884619	33885468	A5SS	0.5	50	50	ENSMUST00000148178.8	ENSMUSG00000059208.16	Hnrnpm	chr17	protein_coding	heterogeneous nuclear ribonucleoprotein M
chr17	33884619	33885621	-	33884619;33885503	33885468;33885621	ES	0.5	50	50	ENSMUST00000139302.8	ENSMUSG00000059208.16	Hnrnpm	chr17	protein_coding	heterogeneous nuclear ribonucleoprotein M
chr17	33871300	33877362	-	33867838	33877362	A3SS	0.5	50	50	ENSMUST00000130946.8	ENSMUSG00000059208.16	Hnrnpm	chr17	protein_coding	heterogeneous nuclear ribonucleoprotein M
chr17	33867838	33868569	-	33867838	33877362	A5SS	0.5	50	50	ENSMUST00000130946.8	ENSMUSG00000059208.16	Hnrnpm	chr17	protein_coding	heterogeneous nuclear ribonucleoprotein M
chr17	33885659;33888150	33887959;33896248	-	33885659	33896248	cassetteExon	0.5	100	100	ENSMUST00000235089.2	ENSMUSG00000059208.16	Hnrnpm	chr17	protein_coding	heterogeneous nuclear ribonucleoprotein M
chr17	33889107	33896248	-	33885659	33896248	A3SS	0.33	50	50	ENSMUST00000235089.2	ENSMUSG00000059208.16	Hnrnpm	chr17	protein_coding	heterogeneous nuclear ribonucleoprotein M
chr17	33907216;33911103	33910993;33915011	-	33907216	33915011	cassetteExon	0.5	100	100	ENSMUST00000172934.8	ENSMUSG00000079557.12	Marchf2	chr17	protein_coding	membrane associated ring-CH-type finger 2
chr17	33907216;33911127	33910993;33915011	-	33907216	33915011	cassetteExon	0.5	100	100	ENSMUST00000172934.8	ENSMUSG00000079557.12	Marchf2	chr17	protein_coding	membrane associated ring-CH-type finger 2
chr17	33907216;33911177	33910993;33915011	-	33907216	33915011	cassetteExon	0.5	100	100	ENSMUST00000172934.8	ENSMUSG00000079557.12	Marchf2	chr17	protein_coding	membrane associated ring-CH-type finger 2
chr17	33928946;33935036	33934917;33937520	-	33928946	33937520	cassetteExon	0.5	100	100	ENSMUST00000172934.8	ENSMUSG00000079557.12	Marchf2	chr17	protein_coding	membrane associated ring-CH-type finger 2
chr17	33928946	33932298	-	33928946	33937520	A5SS	0.33	50	50	ENSMUST00000172934.8	ENSMUSG00000079557.12	Marchf2	chr17	protein_coding	membrane associated ring-CH-type finger 2
chr17	33911103	33915011	-	33911127	33915011	A3SS	0.25	50	50	ENSMUST00000066121.13	ENSMUSG00000079557.12	Marchf2	chr17	protein_coding	membrane associated ring-CH-type finger 2
chr17	33911177	33915011	-	33911127	33915011	A3SS	0.25	50	50	ENSMUST00000066121.13	ENSMUSG00000079557.12	Marchf2	chr17	protein_coding	membrane associated ring-CH-type finger 2
chr17	33907216	33915011	-	33911177	33915011	3pMXE	0.25	50	50	ENSMUST00000173015.8	ENSMUSG00000079557.12	Marchf2	chr17	protein_coding	membrane associated ring-CH-type finger 2
chr17	33911103	33915011	-	33911177	33915011	A3SS	0.25	50	50	ENSMUST00000173015.8	ENSMUSG00000079557.12	Marchf2	chr17	protein_coding	membrane associated ring-CH-type finger 2
chr17	33907216	33915011	-	33911127	33915011	3pMXE	0.25	50	50	ENSMUST00000172767.9	ENSMUSG00000079557.12	Marchf2	chr17	protein_coding	membrane associated ring-CH-type finger 2
chr17	33907216	33915011	-	33911103	33915011	3pMXE	0.25	50	50	ENSMUST00000173454.2	ENSMUSG00000079557.12	Marchf2	chr17	protein_coding	membrane associated ring-CH-type finger 2
chr17	33928946	33932298	-	33928946	33934917	A5SS	0.33	50	50	ENSMUST00000174040.2	ENSMUSG00000079557.12	Marchf2	chr17	protein_coding	membrane associated ring-CH-type finger 2
chr17	33968951	33979197	-	33968951	33979017	5pMXE	0.5	50	50	ENSMUST00000235046.2	ENSMUSG00000077450.14	Rab11b	chr17	protein_coding	RAB11B, member RAS oncogene family
chr17	33966495	33967484	-	33966787	33967484	A3SS	0.5	50	50	ENSMUST00000235046.2	ENSMUSG00000077450.14	Rab11b	chr17	protein_coding	RAB11B, member RAS oncogene family
chr17	33967559	33967841	-	33967564	33967841	A3SS	0.5	50	50	ENSMUST00000235046.2	ENSMUSG00000077450.14	Rab11b	chr17	protein_coding	RAB11B, member RAS oncogene family
chr17	33968876	33979197	-	33968951	33979197	A3SS	0.33	50	50	ENSMUST00000057373.14	ENSMUSG00000077450.14	Rab11b	chr17	protein_coding	RAB11B, member RAS oncogene family
chr17	33968893	33979197	-	33968951	33979197	A3SS	0.33	50	50	ENSMUST00000057373.14	ENSMUSG00000077450.14	Rab11b	chr17	protein_coding	RAB11B, member RAS oncogene family
chr17	33968893	33979197	-	33968876	33979197	A3SS	0.33	50	50	ENSMUST00000173860.8	ENSMUSG00000077450.14	Rab11b	chr17	protein_coding	RAB11B, member RAS oncogene family
chr17	33999617	33999757	-	33999621	33999757	A3SS	0.5	50	50	ENSMUST00000002360.17	ENSMUSG00000002289.17	Angptl4	chr17	protein_coding	angiopoietin-like 4
chr17	33997459	33997973	-	33997459	33999504	A5SS	0.5	50	50	ENSMUST00000002360.17	ENSMUSG00000002289.17	Angptl4	chr17	protein_coding	angiopoietin-like 4
chr17	34035219	34040743	+	34035219;34038970	34038754;34040743	ES	0.5	50	50	ENSMUST00000234426.2	ENSMUSG00000042099.17	Kank3	chr17	protein_coding	KN motif and ankyrin repeat domains 3
chr17	34035219	34036168	+	34035219	34038754	A3SS	0.33	50	50	ENSMUST00000234426.2	ENSMUSG00000042099.17	Kank3	chr17	protein_coding	KN motif and ankyrin repeat domains 3
chr17	34038153	34038754	+	34035219	34038754	A5SS	0.5	50	50	ENSMUST00000234426.2	ENSMUSG00000042099.17	Kank3	chr17	protein_coding	KN motif and ankyrin repeat domains 3
chr17	34035237	34036168	+	34035219	34036168	A5SS	0.5	50	50	ENSMUST00000048560.11	ENSMUSG00000042099.17	Kank3	chr17	protein_coding	KN motif and ankyrin repeat domains 3
chr17	34035219	34040743	+	34038970	34040743	A5SS&ES	0.5	50	50	ENSMUST00000172649.8	ENSMUSG00000042099.17	Kank3	chr17	protein_coding	KN motif and ankyrin repeat domains 3
chr17	34035219	34036168	+	34035219	34040743	A3SS	0.33	50	50	ENSMUST00000173789.2	ENSMUSG00000042099.17	Kank3	chr17	protein_coding	KN motif and ankyrin repeat domains 3
chr17	34042067	34042167	-	34038192	34042167	A3SS	0.33	50	50	ENSMUST00000173019.8	ENSMUSG00000067288.14	Rps28	chr17	protein_coding	ribosomal protein S28
chr17	34042090	34042167	-	34038192	34042167	A3SS	0.33	50	50	ENSMUST00000173019.8	ENSMUSG00000067288.14	Rps28	chr17	protein_coding	ribosomal protein S28
chr17	34042090	34042167	-	34042090	34042171	A5SS	0.5	50	50	ENSMUST00000087342.13	ENSMUSG00000067288.14	Rps28	chr17	protein_coding	ribosomal protein S28
chr17	34042067	34042167	-	34042090	34042167	A3SS	0.33	50	50	ENSMUST00000173480.8	ENSMUSG00000067288.14	Rps28	chr17	protein_coding	ribosomal protein S28
chr17	34043654	34048641	+	34043654;34044624	34044575;34048641	ES	0.16	50	50	ENSMUST00000048249.8	ENSMUSG00000041881.14	Ndufa7	chr17	protein_coding	NADH:ubiquinone oxidoreductase subunit A7
chr17	34044624;34046882	34046776;34048641	+	34044624	34048641	cassetteExon	0.5	100	100	ENSMUST00000048249.8	ENSMUSG00000041881.14	Ndufa7	chr17	protein_coding	NADH:ubiquinone oxidoreductase subunit A7
chr17	34043791	34044575	+	34043654	34044575	A5SS	0.33	50	50	ENSMUST00000048249.8	ENSMUSG00000041881.14	Ndufa7	chr17	protein_coding	NADH:ubiquinone oxidoreductase subunit A7
chr17	34044105	34044575	+	34043654	34044575	A5SS	0.33	50	50	ENSMUST00000048249.8	ENSMUSG00000041881.14	Ndufa7	chr17	protein_coding	NADH:ubiquinone oxidoreductase subunit A7
chr17	34044724	34048641	+	34044624	34048641	A5SS	0.16	50	50	ENSMUST00000048249.8	ENSMUSG00000041881.14	Ndufa7	chr17	protein_coding	NADH:ubiquinone oxidoreductase subunit A7
chr17	34048285	34048641	+	34044624	34048641	A5SS	0.16	50	50	ENSMUST00000048249.8	ENSMUSG00000041881.14	Ndufa7	chr17	protein_coding	NADH:ubiquinone oxidoreductase subunit A7
chr17	34048369	34048641	+	34044624	34048641	A5SS	0.16	50	50	ENSMUST00000048249.8	ENSMUSG00000041881.14	Ndufa7	chr17	protein_coding	NADH:ubiquinone oxidoreductase subunit A7
chr17	34043654	34048641	+	34043654	34044575	3pMXE	0.5	50	50	ENSMUST00000173182.2	ENSMUSG00000041881.14	Ndufa7	chr17	protein_coding	NADH:ubiquinone oxidoreductase subunit A7
chr17	34043654;34044724	34044575;34048641	+	34043654	34048641	cassetteExon	0.5	100	100	ENSMUST00000173132.8	ENSMUSG00000041881.14	Ndufa7	chr17	protein_coding	NADH:ubiquinone oxidoreductase subunit A7
chr17	34046882	34048641	+	34043654	34048641	A5SS	0.16	50	50	ENSMUST00000173132.8	ENSMUSG00000041881.14	Ndufa7	chr17	protein_coding	NADH:ubiquinone oxidoreductase subunit A7
chr17	34048285	34048641	+	34043654	34048641	A5SS	0.16	50	50	ENSMUST00000173132.8	ENSMUSG00000041881.14	Ndufa7	chr17	protein_coding	NADH:ubiquinone oxidoreductase subunit A7
chr17	34048369	34048641	+	34043654	34048641	A5SS	0.16	50	50	ENSMUST00000173132.8	ENSMUSG00000041881.14	Ndufa7	chr17	protein_coding	NADH:ubiquinone oxidoreductase subunit A7
chr17	34044724	34048641	+	34046882	34048641	A5SS&ES	0.16	50	50	ENSMUST00000234470.2	ENSMUSG00000041881.14	Ndufa7	chr17	protein_coding	NADH:ubiquinone oxidoreductase subunit A7
chr17	34048285	34048641	+	34046882	34048641	A5SS	0.16	50	50	ENSMUST00000234470.2	ENSMUSG00000041881.14	Ndufa7	chr17	protein_coding	NADH:ubiquinone oxidoreductase subunit A7
chr17	34048369	34048641	+	34046882	34048641	A5SS	0.16	50	50	ENSMUST00000234470.2	ENSMUSG00000041881.14	Ndufa7	chr17	protein_coding	NADH:ubiquinone oxidoreductase subunit A7
chr17	34044105	34044575	+	34043791	34044575	A5SS	0.33	50	50	ENSMUST00000174498.2	ENSMUSG00000041881.14	Ndufa7	chr17	protein_coding	NADH:ubiquinone oxidoreductase subunit A7
chr17	34043654	34048641	+	34044724	34048641	5pMXE	0.16	50	50	ENSMUST00000173175.8	ENSMUSG00000041881.14	Ndufa7	chr17	protein_coding	NADH:ubiquinone oxidoreductase subunit A7
chr17	34048285	34048641	+	34044724	34048641	A5SS	0.16	50	50	ENSMUST00000173175.8	ENSMUSG00000041881.14	Ndufa7	chr17	protein_coding	NADH:ubiquinone oxidoreductase subunit A7
chr17	34048369	34048641	+	34044724	34048641	A5SS	0.16	50	50	ENSMUST00000173175.8	ENSMUSG00000041881.14	Ndufa7	chr17	protein_coding	NADH:ubiquinone oxidoreductase subunit A7
chr17	34048369	34048641	+	34048285	34048641	A5SS	0.16	50	50	ENSMUST00000174847.8	ENSMUSG00000041881.14	Ndufa7	chr17	protein_coding	NADH:ubiquinone oxidoreductase subunit A7
chr17	34062605	34064990	+	34062265	34064990	A5SS	0.5	50	50	ENSMUST00000002379.15	ENSMUSG00000002308.17	Cd320	chr17	protein_coding	CD320 antigen
chr17	34104192	34105550	-	34104192;34104876	34104823;34105550	ES	0.5	50	50	ENSMUST00000173492.9	ENSMUSG00000079553.12	Kifc1	chr17	protein_coding	kinesin family member C1
chr17	34100478;34101421	34100962;34102073	-	34100478	34102073	cassetteExon	0.5	100	100	ENSMUST00000173982.2	ENSMUSG00000079553.12	Kifc1	chr17	protein_coding	kinesin family member C1
chr17	34127560	34128155	-	34127560	34127718	5pMXE	0.33	50	50	ENSMUST00000172526.3	ENSMUSG00000092564.3	BC051226	chr17	lncRNA	cDNA sequence BC051226
chr17	34127560	34128127	-	34127560	34127718	A5SS	0.33	50	50	ENSMUST00000172526.3	ENSMUSG00000092564.3	BC051226	chr17	lncRNA	cDNA sequence BC051226
chr17	34127560	34128155	-	34127560	34128127	A5SS	0.33	50	50	ENSMUST00000174467.2	ENSMUSG00000092564.3	BC051226	chr17	lncRNA	cDNA sequence BC051226
chr17	34128572	34129405	+	34128437	34129405	A5SS	0.2	50	50	ENSMUST00000173028.8	ENSMUSG00000002307.17	Daxx	chr17	protein_coding	Fas death domain-associated protein
chr17	34128670	34129405	+	34128437	34129405	A5SS	0.2	50	50	ENSMUST00000173028.8	ENSMUSG00000002307.17	Daxx	chr17	protein_coding	Fas death domain-associated protein
chr17	34128828	34129405	+	34128437	34129405	A5SS	0.2	50	50	ENSMUST00000173028.8	ENSMUSG00000002307.17	Daxx	chr17	protein_coding	Fas death domain-associated protein
chr17	34129206	34129405	+	34128437	34129405	A5SS	0.2	50	50	ENSMUST00000173028.8	ENSMUSG00000002307.17	Daxx	chr17	protein_coding	Fas death domain-associated protein
chr17	34132700	34132780	+	34132700	34132817	A3SS	0.33	50	50	ENSMUST00000079421.15	ENSMUSG00000002307.17	Daxx	chr17	protein_coding	Fas death domain-associated protein
chr17	34132700	34132928	+	34132700	34132817	A3SS	0.33	50	50	ENSMUST00000079421.15	ENSMUSG00000002307.17	Daxx	chr17	protein_coding	Fas death domain-associated protein
chr17	34128670	34129405	+	34128572	34129405	A5SS	0.2	50	50	ENSMUST00000079421.15	ENSMUSG00000002307.17	Daxx	chr17	protein_coding	Fas death domain-associated protein
chr17	34128828	34129405	+	34128572	34129405	A5SS	0.2	50	50	ENSMUST00000079421.15	ENSMUSG00000002307.17	Daxx	chr17	protein_coding	Fas death domain-associated protein
chr17	34129206	34129405	+	34128572	34129405	A5SS	0.2	50	50	ENSMUST00000079421.15	ENSMUSG00000002307.17	Daxx	chr17	protein_coding	Fas death domain-associated protein
chr17	34128828	34129405	+	34128670	34129405	A5SS	0.2	50	50	ENSMUST00000234670.2	ENSMUSG00000002307.17	Daxx	chr17	protein_coding	Fas death domain-associated protein
chr17	34129206	34129405	+	34128670	34129405	A5SS	0.2	50	50	ENSMUST00000234670.2	ENSMUSG00000002307.17	Daxx	chr17	protein_coding	Fas death domain-associated protein
chr17	34129206	34129405	+	34128828	34129405	A5SS	0.2	50	50	ENSMUST00000170075.9	ENSMUSG00000002307.17	Daxx	chr17	protein_coding	Fas death domain-associated protein
chr17	34132700	34132780	+	34132700	34132928	A3SS	0.33	50	50	ENSMUST00000174146.3	ENSMUSG00000002307.17	Daxx	chr17	protein_coding	Fas death domain-associated protein
chr17	34134938	34135791	+	34134938	34138845	A3SS	0.5	50	50	ENSMUST00000172619.8	ENSMUSG00000024308.16	Tapbp	chr17	protein_coding	TAP binding protein
chr17	34138698	34138845	+	34134938	34138845	A5SS	0.5	50	50	ENSMUST00000172619.8	ENSMUSG00000024308.16	Tapbp	chr17	protein_coding	TAP binding protein
chr17	34135247	34135791	+	34135247	34138587	A3SS	0.5	50	50	ENSMUST00000234582.2	ENSMUSG00000024308.16	Tapbp	chr17	protein_coding	TAP binding protein
chr17	34145491	34145604	+	34145491	34145601	A3SS	0.5	50	50	ENSMUST00000025161.10	ENSMUSG00000024308.16	Tapbp	chr17	protein_coding	TAP binding protein
chr17	34139561	34144384	+	34139483	34144384	A5SS	0.33	50	50	ENSMUST00000025161.10	ENSMUSG00000024308.16	Tapbp	chr17	protein_coding	TAP binding protein
chr17	34139757	34144384	+	34139483	34144384	A5SS	0.33	50	50	ENSMUST00000025161.10	ENSMUSG00000024308.16	Tapbp	chr17	protein_coding	TAP binding protein
chr17	34139561	34144384	+	34139757	34144384	A5SS	0.33	50	50	ENSMUST00000234273.2	ENSMUSG00000024308.16	Tapbp	chr17	protein_coding	TAP binding protein
chr17	34135247	34135791	+	34134938	34135791	A5SS	0.5	50	50	ENSMUST00000174463.2	ENSMUSG00000051390.11	Zbtb22	chr17	protein_coding	zinc finger and BTB domain containing 22
chr17	34138896	34139044	-	34138600	34139044	A3SS	0.5	50	50	ENSMUST00000185388.3	ENSMUSG00000101438.3	Gm19412	chr17	lncRNA	predicted gene, 19412
chr17	34149018	34150700	+	34149018	34149219	3pMXE	0.5	50	50	ENSMUST00000172468.2	ENSMUSG00000041354.17	Rgl2	chr17	protein_coding	ral guanine nucleotide dissociation stimulator-like 2
chr17	34149018	34150700	+	34149018;34149415	34149219;34150700	ES	0.2	50	50	ENSMUST00000047503.16	ENSMUSG00000041354.17	Rgl2	chr17	protein_coding	ral guanine nucleotide dissociation stimulator-like 2
chr17	34151192	34151428	+	34151192;34151345	34151295;34151428	ES	0.5	50	50	ENSMUST00000047503.16	ENSMUSG00000041354.17	Rgl2	chr17	protein_coding	ral guanine nucleotide dissociation stimulator-like 2
chr17	34151345	34151535	+	34151345	34151428	A3SS	0.5	50	50	ENSMUST00000047503.16	ENSMUSG00000041354.17	Rgl2	chr17	protein_coding	ral guanine nucleotide dissociation stimulator-like 2
chr17	34153981	34154144	+	34153981	34154108	A3SS	0.5	50	50	ENSMUST00000047503.16	ENSMUSG00000041354.17	Rgl2	chr17	protein_coding	ral guanine nucleotide dissociation stimulator-like 2
chr17	34149917	34150700	+	34149415	34150700	A5SS	0.2	50	50	ENSMUST00000047503.16	ENSMUSG00000041354.17	Rgl2	chr17	protein_coding	ral guanine nucleotide dissociation stimulator-like 2
chr17	34150044	34150700	+	34149415	34150700	A5SS	0.2	50	50	ENSMUST00000047503.16	ENSMUSG00000041354.17	Rgl2	chr17	protein_coding	ral guanine nucleotide dissociation stimulator-like 2
chr17	34150608	34150700	+	34149415	34150700	A5SS	0.2	50	50	ENSMUST00000047503.16	ENSMUSG00000041354.17	Rgl2	chr17	protein_coding	ral guanine nucleotide dissociation stimulator-like 2
chr17	34149917	34150700	+	34149018	34150700	A5SS	0.2	50	50	ENSMUST00000173266.8	ENSMUSG00000041354.17	Rgl2	chr17	protein_coding	ral guanine nucleotide dissociation stimulator-like 2
chr17	34150044	34150700	+	34149018	34150700	A5SS	0.2	50	50	ENSMUST00000173266.8	ENSMUSG00000041354.17	Rgl2	chr17	protein_coding	ral guanine nucleotide dissociation stimulator-like 2
chr17	34150608	34150700	+	34149018	34150700	A5SS	0.2	50	50	ENSMUST00000173266.8	ENSMUSG00000041354.17	Rgl2	chr17	protein_coding	ral guanine nucleotide dissociation stimulator-like 2
chr17	34149018	34150700	+	34149415	34150700	5pMXE	0.2	50	50	ENSMUST00000234070.2	ENSMUSG00000041354.17	Rgl2	chr17	protein_coding	ral guanine nucleotide dissociation stimulator-like 2
chr17	34150044	34150700	+	34149917	34150700	A5SS	0.2	50	50	ENSMUST00000174410.2	ENSMUSG00000041354.17	Rgl2	chr17	protein_coding	ral guanine nucleotide dissociation stimulator-like 2
chr17	34150608	34150700	+	34149917	34150700	A5SS	0.2	50	50	ENSMUST00000174410.2	ENSMUSG00000041354.17	Rgl2	chr17	protein_coding	ral guanine nucleotide dissociation stimulator-like 2
chr17	34150608	34150700	+	34150044	34150700	A5SS	0.2	50	50	ENSMUST00000234226.2	ENSMUSG00000041354.17	Rgl2	chr17	protein_coding	ral guanine nucleotide dissociation stimulator-like 2
chr17	34151192	34151428	+	34151345	34151428	A5SS	0.5	50	50	ENSMUST00000173379.9	ENSMUSG00000041354.17	Rgl2	chr17	protein_coding	ral guanine nucleotide dissociation stimulator-like 2
chr17	34158792	34159271	-	34158792	34158998	A5SS	0.5	50	50	ENSMUST00000025163.14	ENSMUSG00000024309.16	Pfdn6	chr17	protein_coding	prefoldin subunit 6
chr17	34158792	34159271	-	34158792;34159139	34158998;34159271	ES	0.33	50	50	ENSMUST00000174048.8	ENSMUSG00000024309.16	Pfdn6	chr17	protein_coding	prefoldin subunit 6
chr17	34159079	34159271	-	34159139	34159271	A3SS	0.33	50	50	ENSMUST00000174048.8	ENSMUSG00000024309.16	Pfdn6	chr17	protein_coding	prefoldin subunit 6
chr17	34158792	34159271	-	34158792;34159079	34158998;34159271	ES	0.33	50	50	ENSMUST00000179418.9	ENSMUSG00000024309.16	Pfdn6	chr17	protein_coding	prefoldin subunit 6
chr17	34163555	34163888	+	34163555	34167194	A3SS	0.5	50	50	ENSMUST00000025170.11	ENSMUSG00000024312.11	Wdr46	chr17	protein_coding	WD repeat domain 46
chr17	34171267	34171377	-	34171286	34171377	A3SS	0.5	50	50	ENSMUST00000174758.8	ENSMUSG00000008668.16	Rps18	chr17	protein_coding	ribosomal protein S18
chr17	34171565;34172882	34172714;34174052	-	34171565	34174052	cassetteExon	0.5	100	100	ENSMUST00000174745.8	ENSMUSG00000008668.16	Rps18	chr17	protein_coding	ribosomal protein S18
chr17	34171565	34174052	-	34171565	34172714	5pMXE	0.5	50	50	ENSMUST00000172799.8	ENSMUSG00000008668.16	Rps18	chr17	protein_coding	ribosomal protein S18
chr17	34175988	34176991	+	34175988;34176875	34176823;34176991	ES	0.5	50	50	ENSMUST00000025178.17	ENSMUSG00000024319.19	Vps52	chr17	protein_coding	VPS52 GARP complex subunit
chr17	34177331	34178227	+	34177331	34177575	A3SS&ES	0.5	50	50	ENSMUST00000025178.17	ENSMUSG00000024319.19	Vps52	chr17	protein_coding	VPS52 GARP complex subunit
chr17	34180742	34181001	+	34180742	34181041	A3SS	0.5	50	50	ENSMUST00000025178.17	ENSMUSG00000024319.19	Vps52	chr17	protein_coding	VPS52 GARP complex subunit
chr17	34194989	34196745	-	34194989	34196845	A5SS	0.5	50	50	ENSMUST00000235582.2	ENSMUSG00000067203.9	H2-K2	chr17	transcribed_unprocessed_pseudogene	histocompatibility 2, K region locus 2
chr17	34215628	34216012	-	34215628;34215833	34215801;34216012	ES	0.33	50	50	ENSMUST00000172912.8	ENSMUSG00000061232.17	H2-K1	chr17	protein_coding	histocompatibility 2, K1, K region
chr17	34215477	34215590	-	34215450	34215590	A3SS	0.5	50	50	ENSMUST00000172912.8	ENSMUSG00000061232.17	H2-K1	chr17	protein_coding	histocompatibility 2, K1, K region
chr17	34215477	34215801	-	34215628	34215801	A3SS&ES	0.5	50	50	ENSMUST00000172912.8	ENSMUSG00000061232.17	H2-K1	chr17	protein_coding	histocompatibility 2, K1, K region
chr17	34215848	34216012	-	34215833	34216012	A3SS	0.33	50	50	ENSMUST00000172912.8	ENSMUSG00000061232.17	H2-K1	chr17	protein_coding	histocompatibility 2, K1, K region
chr17	34218484	34218708	-	34218520	34218708	A3SS	0.5	50	50	ENSMUST00000172912.8	ENSMUSG00000061232.17	H2-K1	chr17	protein_coding	histocompatibility 2, K1, K region
chr17	34219037	34219168	-	34218977	34219168	A3SS	0.33	50	50	ENSMUST00000172912.8	ENSMUSG00000061232.17	H2-K1	chr17	protein_coding	histocompatibility 2, K1, K region
chr17	34216534	34218021	-	34216534	34218245	A5SS	0.33	50	50	ENSMUST00000172912.8	ENSMUSG00000061232.17	H2-K1	chr17	protein_coding	histocompatibility 2, K1, K region
chr17	34215628	34216012	-	34215833	34216012	A3SS	0.33	50	50	ENSMUST00000114311.11	ENSMUSG00000061232.17	H2-K1	chr17	protein_coding	histocompatibility 2, K1, K region
chr17	34215477;34215628	34215590;34215801	-	34215477	34215801	cassetteExon	0.5	100	100	ENSMUST00000236740.2	ENSMUSG00000061232.17	H2-K1	chr17	protein_coding	histocompatibility 2, K1, K region
chr17	34215477;34215628	34215590;34216012	-	34215477;34215833	34215801;34216012	MXE	0.5	100	100	ENSMUST00000236740.2	ENSMUSG00000061232.17	H2-K1	chr17	protein_coding	histocompatibility 2, K1, K region
chr17	34215477;34215848	34215801;34216012	-	34215477;34215628	34215590;34216012	MXE	0.5	100	100	ENSMUST00000236469.2	ENSMUSG00000061232.17	H2-K1	chr17	protein_coding	histocompatibility 2, K1, K region
chr17	34215628;34215848	34215801;34216012	-	34215628	34216012	cassetteExon	0.5	100	100	ENSMUST00000236469.2	ENSMUSG00000061232.17	H2-K1	chr17	protein_coding	histocompatibility 2, K1, K region
chr17	34215477	34215801	-	34215477	34215590	5pMXE	0.5	50	50	ENSMUST00000238021.2	ENSMUSG00000061232.17	H2-K1	chr17	protein_coding	histocompatibility 2, K1, K region
chr17	34215628	34216012	-	34215628	34215801	A5SS	0.5	50	50	ENSMUST00000173543.2	ENSMUSG00000061232.17	H2-K1	chr17	protein_coding	histocompatibility 2, K1, K region
chr17	34216534	34219168	-	34216534	34218245	5pMXE	0.33	50	50	ENSMUST00000235463.2	ENSMUSG00000061232.17	H2-K1	chr17	protein_coding	histocompatibility 2, K1, K region
chr17	34218977	34219168	-	34216534	34219168	A3SS	0.33	50	50	ENSMUST00000087189.7	ENSMUSG00000061232.17	H2-K1	chr17	protein_coding	histocompatibility 2, K1, K region
chr17	34219037	34219168	-	34216534	34219168	A3SS	0.33	50	50	ENSMUST00000087189.7	ENSMUSG00000061232.17	H2-K1	chr17	protein_coding	histocompatibility 2, K1, K region
chr17	34216534	34218021	-	34216534	34219168	A5SS	0.33	50	50	ENSMUST00000087189.7	ENSMUSG00000061232.17	H2-K1	chr17	protein_coding	histocompatibility 2, K1, K region
chr17	34246496;34246814	34246597;34246976	-	34246496	34246976	cassetteExon	0.5	100	100	ENSMUST00000236627.2	ENSMUSG00000073422.12	H2-Ke6	chr17	protein_coding	H2-K region expressed gene 6
chr17	34246814	34247827	-	34246814	34246976	5pMXE	0.25	50	50	ENSMUST00000237759.2	ENSMUSG00000073422.12	H2-Ke6	chr17	protein_coding	H2-K region expressed gene 6
chr17	34246814	34246955	-	34246814	34246976	A5SS	0.25	50	50	ENSMUST00000237759.2	ENSMUSG00000073422.12	H2-Ke6	chr17	protein_coding	H2-K region expressed gene 6
chr17	34246814	34246983	-	34246814	34246976	A5SS	0.25	50	50	ENSMUST00000237759.2	ENSMUSG00000073422.12	H2-Ke6	chr17	protein_coding	H2-K region expressed gene 6
chr17	34246496	34246976	-	34246496	34246597	5pMXE	0.5	50	50	ENSMUST00000174399.8	ENSMUSG00000073422.12	H2-Ke6	chr17	protein_coding	H2-K region expressed gene 6
chr17	34246814	34247827	-	34246814	34246955	5pMXE	0.25	50	50	ENSMUST00000114303.4	ENSMUSG00000073422.12	H2-Ke6	chr17	protein_coding	H2-K region expressed gene 6
chr17	34246814	34246983	-	34246814	34246955	A5SS	0.25	50	50	ENSMUST00000114303.4	ENSMUSG00000073422.12	H2-Ke6	chr17	protein_coding	H2-K region expressed gene 6
chr17	34246496	34246976	-	34246814	34246976	A3SS	0.5	50	50	ENSMUST00000173894.2	ENSMUSG00000073422.12	H2-Ke6	chr17	protein_coding	H2-K region expressed gene 6
chr17	34246814	34247827	-	34246814	34246983	5pMXE	0.25	50	50	ENSMUST00000236164.2	ENSMUSG00000073422.12	H2-Ke6	chr17	protein_coding	H2-K region expressed gene 6
chr17	34249708	34250522	-	34250236	34250522	A3SS	0.5	50	50	ENSMUST00000168978.3	ENSMUSG00000092595.3	Gm20427	chr17	lncRNA	predicted gene 20427
chr17	34249708	34250522	-	34249708	34249798	A5SS	0.5	50	50	ENSMUST00000025186.16	ENSMUSG00000024327.17	Slc39a7	chr17	protein_coding	solute carrier family 39 (zinc transporter), member 7
chr17	34249708	34250522	-	34249708;34250236	34249798;34250522	ES	0.5	50	50	ENSMUST00000169397.9	ENSMUSG00000024327.17	Slc39a7	chr17	protein_coding	solute carrier family 39 (zinc transporter), member 7
chr17	34255731	34255847	+	34255731	34255835	A3SS	0.5	50	50	ENSMUST00000044858.16	ENSMUSG00000039656.18	Rxrb	chr17	protein_coding	retinoid X receptor beta
chr17	34251458	34251801	+	34251197	34251801	A5SS	0.5	50	50	ENSMUST00000044858.16	ENSMUSG00000039656.18	Rxrb	chr17	protein_coding	retinoid X receptor beta
chr17	34263984	34268593	+	34263984;34265476	34265414;34268593	ES	0.2	50	50	ENSMUST00000087497.11	ENSMUSG00000024330.18	Col11a2	chr17	protein_coding	collagen, type XI, alpha 2
chr17	34263984;34264822	34264745;34265414	+	34263984	34265414	cassetteExon	0.5	100	100	ENSMUST00000087497.11	ENSMUSG00000024330.18	Col11a2	chr17	protein_coding	collagen, type XI, alpha 2
chr17	34263984;34264822	34264745;34268593	+	34263984;34265476	34265414;34268593	MXE	0.5	100	100	ENSMUST00000087497.11	ENSMUSG00000024330.18	Col11a2	chr17	protein_coding	collagen, type XI, alpha 2
chr17	34263984;34266251	34266072;34268593	+	34263984;34265476	34265414;34268593	MXE	0.5	100	100	ENSMUST00000087497.11	ENSMUSG00000024330.18	Col11a2	chr17	protein_coding	collagen, type XI, alpha 2
chr17	34265476;34266251	34266072;34268593	+	34265476	34268593	cassetteExon	0.5	100	100	ENSMUST00000087497.11	ENSMUSG00000024330.18	Col11a2	chr17	protein_coding	collagen, type XI, alpha 2
chr17	34267599	34268593	+	34265476	34268593	A5SS	0.2	50	50	ENSMUST00000087497.11	ENSMUSG00000024330.18	Col11a2	chr17	protein_coding	collagen, type XI, alpha 2
chr17	34264822	34266072	+	34264822;34265476	34265414;34266072	ES	0.33	50	50	ENSMUST00000131134.9	ENSMUSG00000024330.18	Col11a2	chr17	protein_coding	collagen, type XI, alpha 2
chr17	34267599	34268593	+	34266251	34268593	A5SS	0.2	50	50	ENSMUST00000131134.9	ENSMUSG00000024330.18	Col11a2	chr17	protein_coding	collagen, type XI, alpha 2
chr17	34263984	34266072	+	34263984;34265476	34265414;34266072	ES	0.33	50	50	ENSMUST00000235819.2	ENSMUSG00000024330.18	Col11a2	chr17	protein_coding	collagen, type XI, alpha 2
chr17	34263984;34264822	34264745;34266072	+	34263984;34265476	34265414;34266072	MXE	0.5	100	100	ENSMUST00000235819.2	ENSMUSG00000024330.18	Col11a2	chr17	protein_coding	collagen, type XI, alpha 2
chr17	34263984;34264822	34264745;34268593	+	34263984;34266251	34265414;34268593	MXE	0.5	100	100	ENSMUST00000235819.2	ENSMUSG00000024330.18	Col11a2	chr17	protein_coding	collagen, type XI, alpha 2
chr17	34263984	34268593	+	34263984;34266251	34266072;34268593	ES	0.2	50	50	ENSMUST00000114255.9	ENSMUSG00000024330.18	Col11a2	chr17	protein_coding	collagen, type XI, alpha 2
chr17	34263984;34264822	34264745;34266072	+	34263984	34266072	cassetteExon	0.5	100	100	ENSMUST00000114255.9	ENSMUSG00000024330.18	Col11a2	chr17	protein_coding	collagen, type XI, alpha 2
chr17	34263984;34264822	34264745;34268593	+	34263984;34266251	34266072;34268593	MXE	0.5	100	100	ENSMUST00000114255.9	ENSMUSG00000024330.18	Col11a2	chr17	protein_coding	collagen, type XI, alpha 2
chr17	34263984	34268593	+	34263984;34264822	34264745;34268593	ES	0.2	50	50	ENSMUST00000114252.9	ENSMUSG00000024330.18	Col11a2	chr17	protein_coding	collagen, type XI, alpha 2
chr17	34264822;34265476	34265414;34268593	+	34264822	34268593	cassetteExon	0.5	100	100	ENSMUST00000114252.9	ENSMUSG00000024330.18	Col11a2	chr17	protein_coding	collagen, type XI, alpha 2
chr17	34264822;34266251	34266072;34268593	+	34264822	34268593	cassetteExon	0.5	100	100	ENSMUST00000114252.9	ENSMUSG00000024330.18	Col11a2	chr17	protein_coding	collagen, type XI, alpha 2
chr17	34267599	34268593	+	34264822	34268593	A5SS	0.2	50	50	ENSMUST00000114252.9	ENSMUSG00000024330.18	Col11a2	chr17	protein_coding	collagen, type XI, alpha 2
chr17	34267599	34268593	+	34263984	34268593	A5SS	0.2	50	50	ENSMUST00000237989.2	ENSMUSG00000024330.18	Col11a2	chr17	protein_coding	collagen, type XI, alpha 2
chr17	34263984;34265476	34265414;34268593	+	34263984;34266251	34264745;34268593	MXE	0.5	100	100	ENSMUST00000237490.2	ENSMUSG00000024330.18	Col11a2	chr17	protein_coding	collagen, type XI, alpha 2
chr17	34264822;34265476	34265414;34268593	+	34264822;34266251	34266072;34268593	MXE	0.5	100	100	ENSMUST00000237490.2	ENSMUSG00000024330.18	Col11a2	chr17	protein_coding	collagen, type XI, alpha 2
chr17	34304801;34307222	34307108;34311414	-	34304801	34311414	cassetteExon	0.5	100	100	ENSMUST00000183290.2	ENSMUSG00000098197.3	BC051537	chr17	lncRNA	cDNA sequence BC051537
chr17	34333151	34333864	-	34333151;34333452	34333324;34333864	ES	0.25	50	50	ENSMUST00000114242.9	ENSMUSG00000024335.21	Brd2	chr17	protein_coding	bromodomain containing 2
chr17	34338874	34340835	-	34338874	34340457	5pMXE	0.16	50	50	ENSMUST00000114242.9	ENSMUSG00000024335.21	Brd2	chr17	protein_coding	bromodomain containing 2
chr17	34338874	34341136	-	34338874	34340457	5pMXE	0.16	50	50	ENSMUST00000114242.9	ENSMUSG00000024335.21	Brd2	chr17	protein_coding	bromodomain containing 2
chr17	34338874	34341541	-	34338874	34340457	5pMXE	0.16	50	50	ENSMUST00000114242.9	ENSMUSG00000024335.21	Brd2	chr17	protein_coding	bromodomain containing 2
chr17	34335309;34335663	34335572;34335882	-	34335309	34335882	cassetteExon	0.5	100	100	ENSMUST00000114242.9	ENSMUSG00000024335.21	Brd2	chr17	protein_coding	bromodomain containing 2
chr17	34333477	34333864	-	34333452	34333864	A3SS	0.25	50	50	ENSMUST00000114242.9	ENSMUSG00000024335.21	Brd2	chr17	protein_coding	bromodomain containing 2
chr17	34333624	34333864	-	34333452	34333864	A3SS	0.25	50	50	ENSMUST00000114242.9	ENSMUSG00000024335.21	Brd2	chr17	protein_coding	bromodomain containing 2
chr17	34336185	34337430	-	34336185	34337580	A5SS	0.5	50	50	ENSMUST00000114242.9	ENSMUSG00000024335.21	Brd2	chr17	protein_coding	bromodomain containing 2
chr17	34338874	34339169	-	34338874	34340457	A5SS	0.16	50	50	ENSMUST00000114242.9	ENSMUSG00000024335.21	Brd2	chr17	protein_coding	bromodomain containing 2
chr17	34338874	34339817	-	34338874	34340457	A5SS	0.16	50	50	ENSMUST00000114242.9	ENSMUSG00000024335.21	Brd2	chr17	protein_coding	bromodomain containing 2
chr17	34338874	34339169	-	34338874	34341136	A5SS	0.16	50	50	ENSMUST00000025193.14	ENSMUSG00000024335.21	Brd2	chr17	protein_coding	bromodomain containing 2
chr17	34338874	34339817	-	34338874	34341136	A5SS	0.16	50	50	ENSMUST00000025193.14	ENSMUSG00000024335.21	Brd2	chr17	protein_coding	bromodomain containing 2
chr17	34338874	34340835	-	34338874	34341136	A5SS	0.16	50	50	ENSMUST00000025193.14	ENSMUSG00000024335.21	Brd2	chr17	protein_coding	bromodomain containing 2
chr17	34338874	34341541	-	34338874	34341136	A5SS	0.16	50	50	ENSMUST00000025193.14	ENSMUSG00000024335.21	Brd2	chr17	protein_coding	bromodomain containing 2
chr17	34338874	34339817	-	34338874	34339169	5pMXE	0.16	50	50	ENSMUST00000154232.9	ENSMUSG00000024335.21	Brd2	chr17	protein_coding	bromodomain containing 2
chr17	34338874	34340835	-	34338874	34339169	5pMXE	0.16	50	50	ENSMUST00000154232.9	ENSMUSG00000024335.21	Brd2	chr17	protein_coding	bromodomain containing 2
chr17	34338874	34341541	-	34338874	34339169	5pMXE	0.16	50	50	ENSMUST00000154232.9	ENSMUSG00000024335.21	Brd2	chr17	protein_coding	bromodomain containing 2
chr17	34333151	34333864	-	34333452	34333864	A3SS	0.25	50	50	ENSMUST00000148143.3	ENSMUSG00000024335.21	Brd2	chr17	protein_coding	bromodomain containing 2
chr17	34333151	34333864	-	34333151	34333324	5pMXE	0.5	50	50	ENSMUST00000235347.2	ENSMUSG00000024335.21	Brd2	chr17	protein_coding	bromodomain containing 2
chr17	34333151;34333477	34333324;34333864	-	34333151	34333864	cassetteExon	0.5	100	100	ENSMUST00000173032.2	ENSMUSG00000024335.21	Brd2	chr17	protein_coding	bromodomain containing 2
chr17	34333151;34333624	34333324;34333864	-	34333151	34333864	cassetteExon	0.5	100	100	ENSMUST00000173032.2	ENSMUSG00000024335.21	Brd2	chr17	protein_coding	bromodomain containing 2
chr17	34333477	34333864	-	34333624	34333864	A3SS	0.25	50	50	ENSMUST00000173204.2	ENSMUSG00000024335.21	Brd2	chr17	protein_coding	bromodomain containing 2
chr17	34335309	34335882	-	34335309	34335572	A5SS	0.5	50	50	ENSMUST00000237872.2	ENSMUSG00000024335.21	Brd2	chr17	protein_coding	bromodomain containing 2
chr17	34338874	34340835	-	34338874	34339817	5pMXE	0.16	50	50	ENSMUST00000237345.2	ENSMUSG00000024335.21	Brd2	chr17	protein_coding	bromodomain containing 2
chr17	34338874	34341541	-	34338874	34339817	5pMXE	0.16	50	50	ENSMUST00000237345.2	ENSMUSG00000024335.21	Brd2	chr17	protein_coding	bromodomain containing 2
chr17	34338874	34341541	-	34338874	34340835	5pMXE	0.16	50	50	ENSMUST00000179722.2	ENSMUSG00000024335.21	Brd2	chr17	protein_coding	bromodomain containing 2
chr17	34338874;34341399	34341136;34341541	-	34338874	34341541	cassetteExon	0.5	100	100	ENSMUST00000177828.2	ENSMUSG00000024335.21	Brd2	chr17	protein_coding	bromodomain containing 2
chr17	34339024	34354156	+	34338696	34354156	A5SS	0.25	50	50	ENSMUST00000236938.2	ENSMUSG00000037649.11	H2-DMa	chr17	protein_coding	histocompatibility 2, class II, locus DMa
chr17	34341908	34354156	+	34338696	34354156	A5SS	0.25	50	50	ENSMUST00000236938.2	ENSMUSG00000037649.11	H2-DMa	chr17	protein_coding	histocompatibility 2, class II, locus DMa
chr17	34342082	34354156	+	34338696	34354156	A5SS	0.25	50	50	ENSMUST00000236938.2	ENSMUSG00000037649.11	H2-DMa	chr17	protein_coding	histocompatibility 2, class II, locus DMa
chr17	34341908	34354156	+	34339024	34354156	A5SS	0.25	50	50	ENSMUST00000237476.2	ENSMUSG00000037649.11	H2-DMa	chr17	protein_coding	histocompatibility 2, class II, locus DMa
chr17	34342082	34354156	+	34339024	34354156	A5SS	0.25	50	50	ENSMUST00000237476.2	ENSMUSG00000037649.11	H2-DMa	chr17	protein_coding	histocompatibility 2, class II, locus DMa
chr17	34342082	34356088	+	34342082	34354156	3pMXE	0.5	50	50	ENSMUST00000235910.2	ENSMUSG00000037649.11	H2-DMa	chr17	protein_coding	histocompatibility 2, class II, locus DMa
chr17	34341908	34354156	+	34342082	34354156	A5SS	0.25	50	50	ENSMUST00000235910.2	ENSMUSG00000037649.11	H2-DMa	chr17	protein_coding	histocompatibility 2, class II, locus DMa
chr17	34354732	34356153	+	34354732	34356088	A3SS	0.5	50	50	ENSMUST00000042121.11	ENSMUSG00000037649.11	H2-DMa	chr17	protein_coding	histocompatibility 2, class II, locus DMa
chr17	34342082	34356088	+	34354732	34356088	A5SS&ES	0.5	50	50	ENSMUST00000042121.11	ENSMUSG00000037649.11	H2-DMa	chr17	protein_coding	histocompatibility 2, class II, locus DMa
chr17	34364444	34366625	+	34362503	34366625	A5SS	0.33	50	50	ENSMUST00000236519.2	ENSMUSG00000037548.16	H2-DMb2	chr17	protein_coding	histocompatibility 2, class II, locus Mb2
chr17	34365967	34366625	+	34362503	34366625	A5SS	0.33	50	50	ENSMUST00000236519.2	ENSMUSG00000037548.16	H2-DMb2	chr17	protein_coding	histocompatibility 2, class II, locus Mb2
chr17	34364444;34365967	34365870;34366625	+	34364444	34366625	cassetteExon	0.5	100	100	ENSMUST00000041982.9	ENSMUSG00000037548.16	H2-DMb2	chr17	protein_coding	histocompatibility 2, class II, locus Mb2
chr17	34375899	34376220	+	34374688	34376220	A5SS	0.5	50	50	ENSMUST00000114232.4	ENSMUSG00000079547.5	H2-DMb1	chr17	protein_coding	histocompatibility 2, class II, locus Mb1
chr17	34401325	34402589	-	34401325;34402204	34402063;34402589	ES	0.5	50	50	ENSMUST00000174576.4	ENSMUSG00000096727.4	Psmb9	chr17	protein_coding	proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)
chr17	34402718	34403130	-	34402718	34403256	A5SS	0.5	50	50	ENSMUST00000174576.4	ENSMUSG00000096727.4	Psmb9	chr17	protein_coding	proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)
chr17	34403387	34406032	-	34403387	34404704	A5SS&ES	0.5	50	50	ENSMUST00000174576.4	ENSMUSG00000096727.4	Psmb9	chr17	protein_coding	proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)
chr17	34404771	34405865	-	34404771	34406224	A5SS	0.5	50	50	ENSMUST00000174576.4	ENSMUSG00000096727.4	Psmb9	chr17	protein_coding	proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)
chr17	34401325	34402589	-	34401325	34402063	5pMXE	0.5	50	50	ENSMUST00000178857.2	ENSMUSG00000096727.4	Psmb9	chr17	protein_coding	proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)
chr17	34411939	34412132	+	34411939	34412102	A3SS	0.5	50	50	ENSMUST00000170086.8	ENSMUSG00000037321.18	Tap1	chr17	protein_coding	transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
chr17	34419244	34420152	+	34419244;34419889	34419685;34420152	ES	0.5	50	50	ENSMUST00000173441.9	ENSMUSG00000024338.16	Psmb8	chr17	protein_coding	proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7)
chr17	34419244	34420152	+	34419889	34420152	A5SS	0.5	50	50	ENSMUST00000237106.2	ENSMUSG00000024338.16	Psmb8	chr17	protein_coding	proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7)
chr17	34419231	34424284	-	34419231	34422902	5pMXE	0.5	50	50	ENSMUST00000173770.3	ENSMUSG00000092550.3	Gm20496	chr17	lncRNA	predicted gene 20496
chr17	34424168	34424261	+	34423597	34424261	A5SS	0.5	50	50	ENSMUST00000025197.6	ENSMUSG00000024339.13	Tap2	chr17	protein_coding	transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)
chr17	34426761	34427728	+	34424958	34427728	A5SS	0.5	50	50	ENSMUST00000025197.6	ENSMUSG00000024339.13	Tap2	chr17	protein_coding	transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)
chr17	34462890	34467442	+	34462890	34463063	3pMXE	0.5	50	50	ENSMUST00000095342.11	ENSMUSG00000041538.17	H2-Ob	chr17	protein_coding	histocompatibility 2, O region beta locus
chr17	34460251	34461489	+	34460251	34461411	A3SS	0.5	50	50	ENSMUST00000095342.11	ENSMUSG00000041538.17	H2-Ob	chr17	protein_coding	histocompatibility 2, O region beta locus
chr17	34462552	34462813	+	34462552	34462862	A3SS	0.5	50	50	ENSMUST00000095342.11	ENSMUSG00000041538.17	H2-Ob	chr17	protein_coding	histocompatibility 2, O region beta locus
chr17	34459215	34459982	+	34458036	34459982	A5SS	0.5	50	50	ENSMUST00000095342.11	ENSMUSG00000041538.17	H2-Ob	chr17	protein_coding	histocompatibility 2, O region beta locus
chr17	34484007	34486382	+	34484007	34486310	A3SS	0.5	50	50	ENSMUST00000237429.2	ENSMUSG00000073421.7	H2-Ab1	chr17	protein_coding	histocompatibility 2, class II antigen A, beta 1
chr17	34482379	34486310	+	34484007	34486310	A5SS&ES	0.5	50	50	ENSMUST00000237429.2	ENSMUSG00000073421.7	H2-Ab1	chr17	protein_coding	histocompatibility 2, class II antigen A, beta 1
chr17	34482379	34486310	+	34482379;34484007	34483735;34486310	ES	0.5	50	50	ENSMUST00000040828.7	ENSMUSG00000073421.7	H2-Ab1	chr17	protein_coding	histocompatibility 2, class II antigen A, beta 1
chr17	34482379	34486310	+	34482379	34483735	A3SS&ES	0.5	50	50	ENSMUST00000237342.2	ENSMUSG00000073421.7	H2-Ab1	chr17	protein_coding	histocompatibility 2, class II antigen A, beta 1
chr17	34502830	34506656	-	34502830;34503510	34503262;34506656	ES	0.33	50	50	ENSMUST00000040655.14	ENSMUSG00000036594.16	H2-Aa	chr17	protein_coding	histocompatibility 2, class II antigen A, alpha
chr17	34503064	34503262	-	34502830	34503262	A3SS	0.5	50	50	ENSMUST00000040655.14	ENSMUSG00000036594.16	H2-Aa	chr17	protein_coding	histocompatibility 2, class II antigen A, alpha
chr17	34505946	34506656	-	34503510	34506656	A3SS	0.33	50	50	ENSMUST00000040655.14	ENSMUSG00000036594.16	H2-Aa	chr17	protein_coding	histocompatibility 2, class II antigen A, alpha
chr17	34505946	34506656	-	34502830	34506656	A3SS	0.33	50	50	ENSMUST00000174751.2	ENSMUSG00000036594.16	H2-Aa	chr17	protein_coding	histocompatibility 2, class II antigen A, alpha
chr17	34502830	34506656	-	34502830;34505946	34503262;34506656	ES	0.33	50	50	ENSMUST00000173944.3	ENSMUSG00000036594.16	H2-Aa	chr17	protein_coding	histocompatibility 2, class II antigen A, alpha
chr17	34502830	34506656	-	34503510	34506656	A3SS&ES	0.33	50	50	ENSMUST00000165139.3	ENSMUSG00000036594.16	H2-Aa	chr17	protein_coding	histocompatibility 2, class II antigen A, alpha
chr17	34524011	34526863	-	34524011	34524607	5pMXE	0.5	50	50	ENSMUST00000174074.2	ENSMUSG00000092415.3	Gm20513	chr17	lncRNA	predicted gene 20513
chr17	34525021	34528618	+	34525021	34528565	A3SS	0.5	50	50	ENSMUST00000235530.2	ENSMUSG00000060586.12	H2-Eb1	chr17	protein_coding	histocompatibility 2, class II antigen E beta
chr17	34533425	34533890	+	34533425	34534017	A3SS	0.5	50	50	ENSMUST00000235530.2	ENSMUSG00000060586.12	H2-Eb1	chr17	protein_coding	histocompatibility 2, class II antigen E beta
chr17	34580177;34581653	34581633;34582166	+	34580177;34582011	34581991;34582166	MXE	0.5	100	100	ENSMUST00000178562.2	ENSMUSG00000024340.16	Btnl2	chr17	protein_coding	butyrophilin-like 2
chr17	34638558	34640827	+	34638558;34639387	34639361;34640827	ES	0.5	50	50	ENSMUST00000114175.8	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34664472	34665931	+	34664472;34665007	34664993;34665931	ES	0.5	50	50	ENSMUST00000114175.8	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34636507;34637078	34636937;34637829	+	34636507	34637829	cassetteExon	0.5	100	100	ENSMUST00000114175.8	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34668803;34670628	34670605;34671474	+	34668803	34671474	cassetteExon	0.5	100	100	ENSMUST00000114175.8	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34635578	34636216	+	34635578	34636437	A3SS	0.25	50	50	ENSMUST00000114175.8	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34635578	34636453	+	34635578	34636437	A3SS	0.25	50	50	ENSMUST00000114175.8	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34635578	34636460	+	34635578	34636437	A3SS	0.25	50	50	ENSMUST00000114175.8	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34640961	34641054	+	34640961	34658811	A3SS	0.2	50	50	ENSMUST00000114175.8	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34640961	34647069	+	34640961	34658811	A3SS	0.2	50	50	ENSMUST00000114175.8	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34640961	34653501	+	34640961	34658811	A3SS	0.2	50	50	ENSMUST00000114175.8	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34671488	34673651	+	34671488	34678837	A3SS	0.33	50	50	ENSMUST00000114175.8	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34671488	34679022	+	34671488	34678837	A3SS	0.33	50	50	ENSMUST00000114175.8	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34658175	34658811	+	34640961	34658811	A5SS	0.5	50	50	ENSMUST00000114175.8	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34636507	34637829	+	34636507	34636937	3pMXE	0.5	50	50	ENSMUST00000149121.8	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34635578	34636453	+	34635578	34636216	A3SS	0.25	50	50	ENSMUST00000149121.8	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34635578	34636460	+	34635578	34636216	A3SS	0.25	50	50	ENSMUST00000149121.8	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34653521;34655189	34654757;34656145	+	34653521	34656145	cassetteExon	0.5	100	100	ENSMUST00000139063.8	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34635578	34636453	+	34635578	34636460	A3SS	0.25	50	50	ENSMUST00000139063.8	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34640961	34641054	+	34640961	34653501	A3SS	0.2	50	50	ENSMUST00000139063.8	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34640961	34647069	+	34640961	34653501	A3SS	0.2	50	50	ENSMUST00000139063.8	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34648955	34653501	+	34640961	34653501	A5SS	0.5	50	50	ENSMUST00000139063.8	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34640961	34641054	+	34640961	34659841	A3SS	0.2	50	50	ENSMUST00000078615.12	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34640961	34647069	+	34640961	34659841	A3SS	0.2	50	50	ENSMUST00000078615.12	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34640961	34653501	+	34640961	34659841	A3SS	0.2	50	50	ENSMUST00000078615.12	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34640961	34658811	+	34640961	34659841	A3SS	0.2	50	50	ENSMUST00000078615.12	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34659322	34659841	+	34640961	34659841	A5SS	0.5	50	50	ENSMUST00000078615.12	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34638558	34640827	+	34638558	34639361	3pMXE	0.5	50	50	ENSMUST00000142208.8	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34636507	34637829	+	34637078	34637829	5pMXE	0.5	50	50	ENSMUST00000131998.2	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34640961	34647069	+	34640961;34641074	34641054;34647069	ES	0.5	50	50	ENSMUST00000131998.2	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34653521	34656145	+	34653521	34654757	3pMXE	0.5	50	50	ENSMUST00000131998.2	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34671488	34673651	+	34671488	34679022	A3SS	0.33	50	50	ENSMUST00000097348.10	ENSMUSG00000057246.17	BC051142	chr17	protein_coding	cDNA sequence BC051142
chr17	34689061	34689953	-	34685821	34689953	A3SS	0.5	50	50	ENSMUST00000236448.2	ENSMUSG00000058435.7	Btnl4	chr17	protein_coding	butyrophilin-like 4
chr17	34692164	34692978	-	34692164	34695959	A5SS	0.5	50	50	ENSMUST00000236448.2	ENSMUSG00000058435.7	Btnl4	chr17	protein_coding	butyrophilin-like 4
chr17	34711472	34711993	-	34711879	34711993	A3SS&ES	0.5	50	50	ENSMUST00000097346.11	ENSMUSG00000073420.11	Btnl5-ps	chr17	transcribed_unprocessed_pseudogene	butyrophilin-like 5, pseudogene
chr17	34783483	34784447	+	34783483;34784356	34784275;34784447	ES	0.5	50	50	ENSMUST00000015612.14	ENSMUSG00000015468.15	Notch4	chr17	protein_coding	notch 4
chr17	34800146	34801373	+	34800146;34800465	34800353;34801373	ES	0.5	50	50	ENSMUST00000015612.14	ENSMUSG00000015468.15	Notch4	chr17	protein_coding	notch 4
chr17	34802978	34803755	+	34802978;34803605	34803386;34803755	ES	0.5	50	50	ENSMUST00000015612.14	ENSMUSG00000015468.15	Notch4	chr17	protein_coding	notch 4
chr17	34797106;34797691	34797578;34799894	+	34797106	34799894	cassetteExon	0.5	100	100	ENSMUST00000015612.14	ENSMUSG00000015468.15	Notch4	chr17	protein_coding	notch 4
chr17	34783483	34784263	+	34783483	34784275	A3SS	0.33	50	50	ENSMUST00000015612.14	ENSMUSG00000015468.15	Notch4	chr17	protein_coding	notch 4
chr17	34804103	34804860	+	34804103	34804879	A3SS	0.5	50	50	ENSMUST00000015612.14	ENSMUSG00000015468.15	Notch4	chr17	protein_coding	notch 4
chr17	34802982	34803386	+	34802978	34803386	A5SS	0.5	50	50	ENSMUST00000015612.14	ENSMUSG00000015468.15	Notch4	chr17	protein_coding	notch 4
chr17	34806037	34806348	+	34806188	34806348	A5SS&ES	0.5	50	50	ENSMUST00000015612.14	ENSMUSG00000015468.15	Notch4	chr17	protein_coding	notch 4
chr17	34783483;34784356	34784263;34784447	+	34783483	34784447	cassetteExon	0.5	100	100	ENSMUST00000126950.2	ENSMUSG00000015468.15	Notch4	chr17	protein_coding	notch 4
chr17	34802978	34803755	+	34803605	34803755	A5SS&ES	0.5	50	50	ENSMUST00000173389.8	ENSMUSG00000015468.15	Notch4	chr17	protein_coding	notch 4
chr17	34783483	34784447	+	34784356	34784447	5pMXE	0.5	50	50	ENSMUST00000152714.2	ENSMUSG00000015468.15	Notch4	chr17	protein_coding	notch 4
chr17	34809537	34809754	+	34809537	34809716	A3SS	0.5	50	50	ENSMUST00000038244.15	ENSMUSG00000034786.18	Gpsm3	chr17	protein_coding	G-protein signalling modulator 3 (AGS3-like, C. elegans)
chr17	34809234;34809915	34809435;34810144	+	34809234	34810144	cassetteExon	0.5	100	100	ENSMUST00000173772.2	ENSMUSG00000034786.18	Gpsm3	chr17	protein_coding	G-protein signalling modulator 3 (AGS3-like, C. elegans)
chr17	34811748	34812546	+	34810466	34812546	A5SS	0.5	50	50	ENSMUST00000173328.8	ENSMUSG00000034673.15	Pbx2	chr17	protein_coding	pre B cell leukemia homeobox 2
chr17	34819111	34819469	+	34819111;34819351	34819325;34819469	ES	0.5	50	50	ENSMUST00000015596.10	ENSMUSG00000015452.15	Ager	chr17	protein_coding	advanced glycosylation end product-specific receptor
chr17	34817221	34817381	+	34817221	34817354	A3SS	0.33	50	50	ENSMUST00000015596.10	ENSMUSG00000015452.15	Ager	chr17	protein_coding	advanced glycosylation end product-specific receptor
chr17	34817221	34817454	+	34817221	34817354	A3SS	0.33	50	50	ENSMUST00000015596.10	ENSMUSG00000015452.15	Ager	chr17	protein_coding	advanced glycosylation end product-specific receptor
chr17	34819595	34819685	+	34819595	34819681	A3SS	0.5	50	50	ENSMUST00000015596.10	ENSMUSG00000015452.15	Ager	chr17	protein_coding	advanced glycosylation end product-specific receptor
chr17	34819477	34819681	+	34819595	34819681	A5SS	0.5	50	50	ENSMUST00000015596.10	ENSMUSG00000015452.15	Ager	chr17	protein_coding	advanced glycosylation end product-specific receptor
chr17	34817221	34817381	+	34817221	34817454	A3SS	0.33	50	50	ENSMUST00000184805.8	ENSMUSG00000015452.15	Ager	chr17	protein_coding	advanced glycosylation end product-specific receptor
chr17	34819111	34819469	+	34819111	34819325	A3SS	0.5	50	50	ENSMUST00000174640.8	ENSMUSG00000015452.15	Ager	chr17	protein_coding	advanced glycosylation end product-specific receptor
chr17	34829618	34829934	+	34829618	34829846	A3SS	0.5	50	50	ENSMUST00000174041.8	ENSMUSG00000034254.18	Agpat1	chr17	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
chr17	34823916	34829419	+	34823464	34829419	A5SS	0.2	50	50	ENSMUST00000174041.8	ENSMUSG00000034254.18	Agpat1	chr17	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
chr17	34825145	34829419	+	34823464	34829419	A5SS	0.2	50	50	ENSMUST00000174041.8	ENSMUSG00000034254.18	Agpat1	chr17	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
chr17	34828050	34829419	+	34823464	34829419	A5SS	0.2	50	50	ENSMUST00000174041.8	ENSMUSG00000034254.18	Agpat1	chr17	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
chr17	34828641	34829419	+	34823464	34829419	A5SS	0.2	50	50	ENSMUST00000174041.8	ENSMUSG00000034254.18	Agpat1	chr17	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
chr17	34829900	34830248	+	34829979	34830248	A5SS	0.5	50	50	ENSMUST00000174041.8	ENSMUSG00000034254.18	Agpat1	chr17	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
chr17	34825145	34829419	+	34823916	34829419	A5SS	0.2	50	50	ENSMUST00000173242.8	ENSMUSG00000034254.18	Agpat1	chr17	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
chr17	34828050	34829419	+	34823916	34829419	A5SS	0.2	50	50	ENSMUST00000173242.8	ENSMUSG00000034254.18	Agpat1	chr17	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
chr17	34828641	34829419	+	34823916	34829419	A5SS	0.2	50	50	ENSMUST00000173242.8	ENSMUSG00000034254.18	Agpat1	chr17	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
chr17	34829618;34829979	34829934;34830248	+	34829618;34829900	34829846;34830248	MXE	0.5	100	100	ENSMUST00000173973.8	ENSMUSG00000034254.18	Agpat1	chr17	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
chr17	34828050	34829419	+	34825145	34829419	A5SS	0.2	50	50	ENSMUST00000173973.8	ENSMUSG00000034254.18	Agpat1	chr17	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
chr17	34828641	34829419	+	34825145	34829419	A5SS	0.2	50	50	ENSMUST00000173973.8	ENSMUSG00000034254.18	Agpat1	chr17	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
chr17	34828641	34829419	+	34828050	34829419	A5SS	0.2	50	50	ENSMUST00000114140.10	ENSMUSG00000034254.18	Agpat1	chr17	protein_coding	1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
chr17	34834260	34834703	-	34834260	34834881	A5SS	0.5	50	50	ENSMUST00000097345.10	ENSMUSG00000015467.15	Egfl8	chr17	protein_coding	EGF-like domain 8
chr17	34842088	34844810	-	34842088;34844718	34844611;34844810	ES	0.5	50	50	ENSMUST00000168709.3	ENSMUSG00000092176.2	Gm20460	chr17	lncRNA	predicted gene 20460
chr17	34845969	34846345	-	34845969	34846140	5pMXE	0.12	50	50	ENSMUST00000168709.3	ENSMUSG00000092176.2	Gm20460	chr17	lncRNA	predicted gene 20460
chr17	34845969	34846907	-	34845969	34846140	5pMXE	0.12	50	50	ENSMUST00000168709.3	ENSMUSG00000092176.2	Gm20460	chr17	lncRNA	predicted gene 20460
chr17	34845969	34847092	-	34845969	34846140	5pMXE	0.12	50	50	ENSMUST00000168709.3	ENSMUSG00000092176.2	Gm20460	chr17	lncRNA	predicted gene 20460
chr17	34836461	34836638	-	34834779	34836638	A3SS	0.5	50	50	ENSMUST00000168709.3	ENSMUSG00000092176.2	Gm20460	chr17	lncRNA	predicted gene 20460
chr17	34845969	34846096	-	34845969	34846140	A5SS	0.12	50	50	ENSMUST00000168709.3	ENSMUSG00000092176.2	Gm20460	chr17	lncRNA	predicted gene 20460
chr17	34845969	34846150	-	34845969	34846140	A5SS	0.12	50	50	ENSMUST00000168709.3	ENSMUSG00000092176.2	Gm20460	chr17	lncRNA	predicted gene 20460
chr17	34845969	34846221	-	34845969	34846140	A5SS	0.12	50	50	ENSMUST00000168709.3	ENSMUSG00000092176.2	Gm20460	chr17	lncRNA	predicted gene 20460
chr17	34845969	34846299	-	34845969	34846140	A5SS	0.12	50	50	ENSMUST00000168709.3	ENSMUSG00000092176.2	Gm20460	chr17	lncRNA	predicted gene 20460
chr17	34845969	34846907	-	34845969	34846299	5pMXE	0.12	50	50	ENSMUST00000171121.9	ENSMUSG00000015474.17	Ppt2	chr17	protein_coding	palmitoyl-protein thioesterase 2
chr17	34845969	34847092	-	34845969	34846299	5pMXE	0.12	50	50	ENSMUST00000171121.9	ENSMUSG00000015474.17	Ppt2	chr17	protein_coding	palmitoyl-protein thioesterase 2
chr17	34845969	34846096	-	34845969	34846299	A5SS	0.12	50	50	ENSMUST00000171121.9	ENSMUSG00000015474.17	Ppt2	chr17	protein_coding	palmitoyl-protein thioesterase 2
chr17	34845969	34846150	-	34845969	34846299	A5SS	0.12	50	50	ENSMUST00000171121.9	ENSMUSG00000015474.17	Ppt2	chr17	protein_coding	palmitoyl-protein thioesterase 2
chr17	34845969	34846221	-	34845969	34846299	A5SS	0.12	50	50	ENSMUST00000171121.9	ENSMUSG00000015474.17	Ppt2	chr17	protein_coding	palmitoyl-protein thioesterase 2
chr17	34845969	34846345	-	34845969	34846299	A5SS	0.12	50	50	ENSMUST00000171121.9	ENSMUSG00000015474.17	Ppt2	chr17	protein_coding	palmitoyl-protein thioesterase 2
chr17	34845969	34846907	-	34845969	34846221	5pMXE	0.12	50	50	ENSMUST00000064953.15	ENSMUSG00000015474.17	Ppt2	chr17	protein_coding	palmitoyl-protein thioesterase 2
chr17	34845969	34847092	-	34845969	34846221	5pMXE	0.12	50	50	ENSMUST00000064953.15	ENSMUSG00000015474.17	Ppt2	chr17	protein_coding	palmitoyl-protein thioesterase 2
chr17	34845969	34846096	-	34845969	34846221	A5SS	0.12	50	50	ENSMUST00000064953.15	ENSMUSG00000015474.17	Ppt2	chr17	protein_coding	palmitoyl-protein thioesterase 2
chr17	34845969	34846150	-	34845969	34846221	A5SS	0.12	50	50	ENSMUST00000064953.15	ENSMUSG00000015474.17	Ppt2	chr17	protein_coding	palmitoyl-protein thioesterase 2
chr17	34845969	34846345	-	34845969	34846221	A5SS	0.12	50	50	ENSMUST00000064953.15	ENSMUSG00000015474.17	Ppt2	chr17	protein_coding	palmitoyl-protein thioesterase 2
chr17	34845969	34846907	-	34845969	34846150	5pMXE	0.12	50	50	ENSMUST00000168391.9	ENSMUSG00000015474.17	Ppt2	chr17	protein_coding	palmitoyl-protein thioesterase 2
chr17	34845969	34847092	-	34845969	34846150	5pMXE	0.12	50	50	ENSMUST00000168391.9	ENSMUSG00000015474.17	Ppt2	chr17	protein_coding	palmitoyl-protein thioesterase 2
chr17	34845969	34846096	-	34845969	34846150	A5SS	0.12	50	50	ENSMUST00000168391.9	ENSMUSG00000015474.17	Ppt2	chr17	protein_coding	palmitoyl-protein thioesterase 2
chr17	34845969	34846345	-	34845969	34846150	A5SS	0.12	50	50	ENSMUST00000168391.9	ENSMUSG00000015474.17	Ppt2	chr17	protein_coding	palmitoyl-protein thioesterase 2
chr17	34845969	34847092	-	34845969	34846907	5pMXE	0.12	50	50	ENSMUST00000166040.9	ENSMUSG00000015474.17	Ppt2	chr17	protein_coding	palmitoyl-protein thioesterase 2
chr17	34845969	34846096	-	34845969	34846907	A5SS	0.12	50	50	ENSMUST00000166040.9	ENSMUSG00000015474.17	Ppt2	chr17	protein_coding	palmitoyl-protein thioesterase 2
chr17	34845969	34846345	-	34845969	34846907	A5SS	0.12	50	50	ENSMUST00000166040.9	ENSMUSG00000015474.17	Ppt2	chr17	protein_coding	palmitoyl-protein thioesterase 2
chr17	34845969	34846096	-	34845969	34847092	A5SS	0.12	50	50	ENSMUST00000167097.9	ENSMUSG00000015474.17	Ppt2	chr17	protein_coding	palmitoyl-protein thioesterase 2
chr17	34845969	34846345	-	34845969	34847092	A5SS	0.12	50	50	ENSMUST00000167097.9	ENSMUSG00000015474.17	Ppt2	chr17	protein_coding	palmitoyl-protein thioesterase 2
chr17	34845969	34846096	-	34845969	34846345	A5SS	0.12	50	50	ENSMUST00000170345.8	ENSMUSG00000015474.17	Ppt2	chr17	protein_coding	palmitoyl-protein thioesterase 2
chr17	34863927	34864153	+	34863927	34864219	A3SS	0.5	50	50	ENSMUST00000036720.9	ENSMUSG00000033739.9	Fkbpl	chr17	protein_coding	FK506 binding protein-like
chr17	34866290	34867193	+	34866290;34866713	34866634;34867193	ES	0.5	50	50	ENSMUST00000015605.15	ENSMUSG00000015461.16	Atf6b	chr17	protein_coding	activating transcription factor 6 beta
chr17	34866713	34867204	+	34866713	34867193	A3SS	0.5	50	50	ENSMUST00000015605.15	ENSMUSG00000015461.16	Atf6b	chr17	protein_coding	activating transcription factor 6 beta
chr17	34866299	34866634	+	34866290	34866634	A5SS	0.5	50	50	ENSMUST00000015605.15	ENSMUSG00000015461.16	Atf6b	chr17	protein_coding	activating transcription factor 6 beta
chr17	34866290	34867193	+	34866290	34866634	A3SS&ES	0.5	50	50	ENSMUST00000174614.8	ENSMUSG00000015461.16	Atf6b	chr17	protein_coding	activating transcription factor 6 beta
chr17	34866290	34867193	+	34866713	34867193	A5SS&ES	0.5	50	50	ENSMUST00000173984.2	ENSMUSG00000015461.16	Atf6b	chr17	protein_coding	activating transcription factor 6 beta
chr17	34898093	34900928	+	34898093;34899560	34898835;34900928	ES	0.5	50	50	ENSMUST00000238967.2	ENSMUSG00000033327.19	Tnxb	chr17	protein_coding	tenascin XB
chr17	34915104	34917067	+	34915104;34915834	34915511;34917067	ES	0.5	50	50	ENSMUST00000238967.2	ENSMUSG00000033327.19	Tnxb	chr17	protein_coding	tenascin XB
chr17	34898093;34901296	34900928;34902258	+	34898093	34902258	cassetteExon	0.5	100	100	ENSMUST00000168533.8	ENSMUSG00000033327.19	Tnxb	chr17	protein_coding	tenascin XB
chr17	34898093	34898835	+	34898093	34902258	A3SS	0.33	50	50	ENSMUST00000168533.8	ENSMUSG00000033327.19	Tnxb	chr17	protein_coding	tenascin XB
chr17	34915104	34915511	+	34915104	34930408	A3SS	0.33	50	50	ENSMUST00000168533.8	ENSMUSG00000033327.19	Tnxb	chr17	protein_coding	tenascin XB
chr17	34915104	34917067	+	34915104	34930408	A3SS	0.33	50	50	ENSMUST00000168533.8	ENSMUSG00000033327.19	Tnxb	chr17	protein_coding	tenascin XB
chr17	34929998	34930408	+	34915104	34930408	A5SS	0.5	50	50	ENSMUST00000168533.8	ENSMUSG00000033327.19	Tnxb	chr17	protein_coding	tenascin XB
chr17	34898093	34898835	+	34898093	34900928	A3SS	0.33	50	50	ENSMUST00000238305.2	ENSMUSG00000033327.19	Tnxb	chr17	protein_coding	tenascin XB
chr17	34899560	34900928	+	34898093	34900928	A5SS	0.5	50	50	ENSMUST00000238305.2	ENSMUSG00000033327.19	Tnxb	chr17	protein_coding	tenascin XB
chr17	34954581	34954679	-	34954581	34954710	A5SS	0.5	50	50	ENSMUST00000069507.9	ENSMUSG00000073418.5	C4b	chr17	protein_coding	complement component 4B (Chido blood group)
chr17	35022230	35022322	-	35022235	35022322	A3SS	0.5	50	50	ENSMUST00000025223.9	ENSMUSG00000024365.10	Cyp21a1	chr17	protein_coding	cytochrome P450, family 21, subfamily a, polypeptide 1
chr17	35023121	35023172	-	35023107	35023172	A3SS	0.5	50	50	ENSMUST00000025223.9	ENSMUSG00000024365.10	Cyp21a1	chr17	protein_coding	cytochrome P450, family 21, subfamily a, polypeptide 1
chr17	35029353	35030091	-	35029353;35029577	35029475;35030091	ES	0.5	50	50	ENSMUST00000160679.8	ENSMUSG00000015451.17	C4a	chr17	lncRNA	complement component 4A (Rodgers blood group)
chr17	35034550	35035368	-	35034550;35035239	35035036;35035368	ES	0.5	50	50	ENSMUST00000160679.8	ENSMUSG00000015451.17	C4a	chr17	lncRNA	complement component 4A (Rodgers blood group)
chr17	35030165	35030527	-	35030165	35030295	A5SS&ES	0.5	50	50	ENSMUST00000160679.8	ENSMUSG00000015451.17	C4a	chr17	lncRNA	complement component 4A (Rodgers blood group)
chr17	35030840	35030972	-	35030840	35031800	A5SS	0.5	50	50	ENSMUST00000160679.8	ENSMUSG00000015451.17	C4a	chr17	lncRNA	complement component 4A (Rodgers blood group)
chr17	35043300	35043727	-	35043300;35043637	35043490;35043727	ES	0.5	50	50	ENSMUST00000077477.12	ENSMUSG00000061207.12	Stk19	chr17	protein_coding	serine/threonine kinase 19
chr17	35043300	35043558	-	35043300	35043490	A5SS	0.33	50	50	ENSMUST00000077477.12	ENSMUSG00000061207.12	Stk19	chr17	protein_coding	serine/threonine kinase 19
chr17	35043824	35044579	-	35043824	35050989	A5SS	0.25	50	50	ENSMUST00000077477.12	ENSMUSG00000061207.12	Stk19	chr17	protein_coding	serine/threonine kinase 19
chr17	35043824	35050974	-	35043824	35050989	A5SS	0.25	50	50	ENSMUST00000077477.12	ENSMUSG00000061207.12	Stk19	chr17	protein_coding	serine/threonine kinase 19
chr17	35051517	35055406	-	35043824	35055406	A3SS	0.5	50	50	ENSMUST00000161885.8	ENSMUSG00000061207.12	Stk19	chr17	protein_coding	serine/threonine kinase 19
chr17	35043824	35044579	-	35043824	35055406	A5SS	0.25	50	50	ENSMUST00000161885.8	ENSMUSG00000061207.12	Stk19	chr17	protein_coding	serine/threonine kinase 19
chr17	35043824	35050974	-	35043824	35055406	A5SS	0.25	50	50	ENSMUST00000161885.8	ENSMUSG00000061207.12	Stk19	chr17	protein_coding	serine/threonine kinase 19
chr17	35043824	35050989	-	35043824	35055406	A5SS	0.25	50	50	ENSMUST00000161885.8	ENSMUSG00000061207.12	Stk19	chr17	protein_coding	serine/threonine kinase 19
chr17	35043300;35043637	35043558;35043727	-	35043300	35043727	cassetteExon	0.5	100	100	ENSMUST00000162954.2	ENSMUSG00000061207.12	Stk19	chr17	protein_coding	serine/threonine kinase 19
chr17	35043824	35044579	-	35043824	35050974	A5SS	0.33	50	50	ENSMUST00000162055.8	ENSMUSG00000061207.12	Stk19	chr17	protein_coding	serine/threonine kinase 19
chr17	35056730	35057202	+	35056730;35057112	35056877;35057202	ES	0.5	50	50	ENSMUST00000173874.8	ENSMUSG00000040482.17	Dxo	chr17	protein_coding	decapping exoribonuclease
chr17	35057112	35057275	+	35057112	35057202	A3SS	0.5	50	50	ENSMUST00000173874.8	ENSMUSG00000040482.17	Dxo	chr17	protein_coding	decapping exoribonuclease
chr17	35056217	35056369	+	35056192	35056369	A5SS	0.5	50	50	ENSMUST00000173874.8	ENSMUSG00000040482.17	Dxo	chr17	protein_coding	decapping exoribonuclease
chr17	35056730	35057524	+	35056730	35056877	3pMXE	0.33	50	50	ENSMUST00000173644.2	ENSMUSG00000040482.17	Dxo	chr17	protein_coding	decapping exoribonuclease
chr17	35056730	35057202	+	35056730	35056877	A3SS	0.33	50	50	ENSMUST00000173644.2	ENSMUSG00000040482.17	Dxo	chr17	protein_coding	decapping exoribonuclease
chr17	35056730;35057421	35057202;35057524	+	35056730	35057524	cassetteExon	0.5	100	100	ENSMUST00000174092.8	ENSMUSG00000040482.17	Dxo	chr17	protein_coding	decapping exoribonuclease
chr17	35056730	35057524	+	35057421	35057524	5pMXE	0.5	50	50	ENSMUST00000174569.2	ENSMUSG00000040482.17	Dxo	chr17	protein_coding	decapping exoribonuclease
chr17	35060194	35060647	-	35060194;35060522	35060418;35060647	ES	0.5	50	50	ENSMUST00000174226.8	ENSMUSG00000040356.17	Skiv2l	chr17	protein_coding	superkiller viralicidic activity 2-like (S. cerevisiae)
chr17	35064213	35064804	-	35064731	35064804	A3SS&ES	0.5	50	50	ENSMUST00000174226.8	ENSMUSG00000040356.17	Skiv2l	chr17	protein_coding	superkiller viralicidic activity 2-like (S. cerevisiae)
chr17	35065123	35065498	-	35065149	35065498	A3SS	0.5	50	50	ENSMUST00000174226.8	ENSMUSG00000040356.17	Skiv2l	chr17	protein_coding	superkiller viralicidic activity 2-like (S. cerevisiae)
chr17	35060194	35060647	-	35060522	35060647	3pMXE	0.5	50	50	ENSMUST00000172878.2	ENSMUSG00000040356.17	Skiv2l	chr17	protein_coding	superkiller viralicidic activity 2-like (S. cerevisiae)
chr17	35068975	35069110	-	35067201	35069110	A3SS	0.5	50	50	ENSMUST00000172966.2	ENSMUSG00000040356.17	Skiv2l	chr17	protein_coding	superkiller viralicidic activity 2-like (S. cerevisiae)
chr17	35067201	35067301	-	35067201	35069110	A5SS	0.5	50	50	ENSMUST00000172966.2	ENSMUSG00000040356.17	Skiv2l	chr17	protein_coding	superkiller viralicidic activity 2-like (S. cerevisiae)
chr17	35069438	35069887	+	35069650	35069887	A5SS	0.33	50	50	ENSMUST00000097343.11	ENSMUSG00000024369.17	Nelfe	chr17	protein_coding	negative elongation factor complex member E, Rdbp
chr17	35069564	35069887	+	35069650	35069887	A5SS	0.33	50	50	ENSMUST00000097343.11	ENSMUSG00000024369.17	Nelfe	chr17	protein_coding	negative elongation factor complex member E, Rdbp
chr17	35069438	35069887	+	35069564	35069887	A5SS	0.33	50	50	ENSMUST00000173357.8	ENSMUSG00000024369.17	Nelfe	chr17	protein_coding	negative elongation factor complex member E, Rdbp
chr17	35076797	35077474	-	35076797;35077130	35077013;35077474	ES	0.5	50	50	ENSMUST00000141295.8	ENSMUSG00000090231.11	Cfb	chr17	protein_coding	complement factor B
chr17	35075905	35075980	-	35075921	35075980	A3SS	0.5	50	50	ENSMUST00000141295.8	ENSMUSG00000090231.11	Cfb	chr17	protein_coding	complement factor B
chr17	35076108	35076195	-	35076112	35076195	A3SS	0.5	50	50	ENSMUST00000141295.8	ENSMUSG00000090231.11	Cfb	chr17	protein_coding	complement factor B
chr17	35080940	35082321	-	35080940	35081028	5pMXE	0.5	50	50	ENSMUST00000128767.8	ENSMUSG00000090231.11	Cfb	chr17	protein_coding	complement factor B
chr17	35076797	35077474	-	35076797	35077013	5pMXE	0.33	50	50	ENSMUST00000153400.8	ENSMUSG00000090231.11	Cfb	chr17	protein_coding	complement factor B
chr17	35076797	35077985	-	35076797	35077013	5pMXE	0.33	50	50	ENSMUST00000153400.8	ENSMUSG00000090231.11	Cfb	chr17	protein_coding	complement factor B
chr17	35076797;35077571	35077474;35077985	-	35076797	35077985	cassetteExon	0.5	100	100	ENSMUST00000176332.2	ENSMUSG00000090231.11	Cfb	chr17	protein_coding	complement factor B
chr17	35083582	35085494	-	35083582;35083845	35083705;35085494	ES	0.5	50	50	ENSMUST00000146299.8	ENSMUSG00000092511.8	Gm20547	chr17	protein_coding	predicted gene 20547
chr17	35095486	35100926	-	35095486;35100772	35100548;35100926	ES	0.5	50	50	ENSMUST00000146299.8	ENSMUSG00000092511.8	Gm20547	chr17	protein_coding	predicted gene 20547
chr17	35080189;35082007	35081999;35082321	-	35080189;35080940	35080707;35082321	MXE	0.5	100	100	ENSMUST00000146299.8	ENSMUSG00000092511.8	Gm20547	chr17	protein_coding	predicted gene 20547
chr17	35080189;35082204	35081999;35082321	-	35080189;35080940	35080707;35082321	MXE	0.5	100	100	ENSMUST00000146299.8	ENSMUSG00000092511.8	Gm20547	chr17	protein_coding	predicted gene 20547
chr17	35095486;35099043	35098858;35100548	-	35095486	35100548	cassetteExon	0.5	100	100	ENSMUST00000146299.8	ENSMUSG00000092511.8	Gm20547	chr17	protein_coding	predicted gene 20547
chr17	35094997	35095130	-	35091483	35095130	A3SS	0.5	50	50	ENSMUST00000146299.8	ENSMUSG00000092511.8	Gm20547	chr17	protein_coding	predicted gene 20547
chr17	35091483	35092438	-	35091483	35095130	A5SS	0.5	50	50	ENSMUST00000146299.8	ENSMUSG00000092511.8	Gm20547	chr17	protein_coding	predicted gene 20547
chr17	35082007;35082204	35082155;35082321	-	35082007	35082321	cassetteExon	0.5	100	100	ENSMUST00000129891.2	ENSMUSG00000092511.8	Gm20547	chr17	protein_coding	predicted gene 20547
chr17	35095486	35114383	-	35095486	35100926	5pMXE	0.25	50	50	ENSMUST00000152417.8	ENSMUSG00000024371.15	C2	chr17	protein_coding	complement component 2 (within H-2S)
chr17	35095486	35098858	-	35095486	35100926	A5SS	0.25	50	50	ENSMUST00000152417.8	ENSMUSG00000024371.15	C2	chr17	protein_coding	complement component 2 (within H-2S)
chr17	35096450	35098858	-	35095486	35098858	A3SS	0.5	50	50	ENSMUST00000025230.15	ENSMUSG00000024371.15	C2	chr17	protein_coding	complement component 2 (within H-2S)
chr17	35112676	35114383	-	35095486	35114383	A3SS	0.33	50	50	ENSMUST00000148431.10	ENSMUSG00000024371.15	C2	chr17	protein_coding	complement component 2 (within H-2S)
chr17	35113911	35114383	-	35095486	35114383	A3SS	0.33	50	50	ENSMUST00000148431.10	ENSMUSG00000024371.15	C2	chr17	protein_coding	complement component 2 (within H-2S)
chr17	35095486	35098858	-	35095486	35114383	A5SS	0.25	50	50	ENSMUST00000148431.10	ENSMUSG00000024371.15	C2	chr17	protein_coding	complement component 2 (within H-2S)
chr17	35095486	35100548	-	35095486	35114383	A5SS	0.25	50	50	ENSMUST00000148431.10	ENSMUSG00000024371.15	C2	chr17	protein_coding	complement component 2 (within H-2S)
chr17	35083582	35085494	-	35083582	35083705	5pMXE	0.5	50	50	ENSMUST00000127795.2	ENSMUSG00000024371.15	C2	chr17	protein_coding	complement component 2 (within H-2S)
chr17	35112676	35114383	-	35112676;35113911	35113871;35114383	ES	0.5	50	50	ENSMUST00000174880.8	ENSMUSG00000024371.15	C2	chr17	protein_coding	complement component 2 (within H-2S)
chr17	35113745	35114197	+	35113083	35114197	A5SS	0.5	50	50	ENSMUST00000173093.2	ENSMUSG00000049823.10	Zbtb12	chr17	protein_coding	zinc finger and BTB domain containing 12
chr17	35124432	35124886	+	35124432;35124687	35124586;35124886	ES	0.5	50	50	ENSMUST00000114033.9	ENSMUSG00000013787.16	Ehmt2	chr17	protein_coding	euchromatic histone lysine N-methyltransferase 2
chr17	35126820	35127380	+	35126820;35127254	35127150;35127380	ES	0.33	50	50	ENSMUST00000114033.9	ENSMUSG00000013787.16	Ehmt2	chr17	protein_coding	euchromatic histone lysine N-methyltransferase 2
chr17	35130031	35130555	+	35130031;35130454	35130339;35130555	ES	0.5	50	50	ENSMUST00000114033.9	ENSMUSG00000013787.16	Ehmt2	chr17	protein_coding	euchromatic histone lysine N-methyltransferase 2
chr17	35118892	35121149	+	35118892	35121990	A3SS	0.5	50	50	ENSMUST00000114033.9	ENSMUSG00000013787.16	Ehmt2	chr17	protein_coding	euchromatic histone lysine N-methyltransferase 2
chr17	35125853	35125929	+	35125853	35125959	A3SS	0.5	50	50	ENSMUST00000114033.9	ENSMUSG00000013787.16	Ehmt2	chr17	protein_coding	euchromatic histone lysine N-methyltransferase 2
chr17	35126413	35126502	+	35126413	35126498	A3SS	0.5	50	50	ENSMUST00000114033.9	ENSMUSG00000013787.16	Ehmt2	chr17	protein_coding	euchromatic histone lysine N-methyltransferase 2
chr17	35130641	35131436	+	35130641	35131365	A3SS	0.5	50	50	ENSMUST00000114033.9	ENSMUSG00000013787.16	Ehmt2	chr17	protein_coding	euchromatic histone lysine N-methyltransferase 2
chr17	35127289	35127380	+	35127254	35127380	A5SS	0.33	50	50	ENSMUST00000114033.9	ENSMUSG00000013787.16	Ehmt2	chr17	protein_coding	euchromatic histone lysine N-methyltransferase 2
chr17	35124432	35124886	+	35124432	35124586	A3SS	0.5	50	50	ENSMUST00000138500.2	ENSMUSG00000013787.16	Ehmt2	chr17	protein_coding	euchromatic histone lysine N-methyltransferase 2
chr17	35126820	35127380	+	35126820;35127289	35127150;35127380	ES	0.33	50	50	ENSMUST00000131915.2	ENSMUSG00000013787.16	Ehmt2	chr17	protein_coding	euchromatic histone lysine N-methyltransferase 2
chr17	35137518	35137821	+	35137642	35137821	A5SS	0.5	50	50	ENSMUST00000173664.2	ENSMUSG00000007034.16	Slc44a4	chr17	protein_coding	solute carrier family 44, member 4
chr17	35136852	35137215	+	35136571	35137215	A5SS	0.5	50	50	ENSMUST00000007249.15	ENSMUSG00000007034.16	Slc44a4	chr17	protein_coding	solute carrier family 44, member 4
chr17	35169451	35170861	-	35169451	35169674	5pMXE	0.5	50	50	ENSMUST00000174464.2	ENSMUSG00000092203.8	1110038B12Rik	chr17	lncRNA	RIKEN cDNA 1110038B12 gene
chr17	35169451;35170901	35170861;35171112	-	35169451;35169823	35169674;35171112	MXE	0.5	100	100	ENSMUST00000174714.8	ENSMUSG00000092203.8	1110038B12Rik	chr17	lncRNA	RIKEN cDNA 1110038B12 gene
chr17	35169823;35170901	35170861;35171112	-	35169823	35171112	cassetteExon	0.5	100	100	ENSMUST00000174714.8	ENSMUSG00000092203.8	1110038B12Rik	chr17	lncRNA	RIKEN cDNA 1110038B12 gene
chr17	35169451	35170861	-	35169451;35169823	35169674;35170861	ES	0.5	50	50	ENSMUST00000173811.8	ENSMUSG00000092203.8	1110038B12Rik	chr17	lncRNA	RIKEN cDNA 1110038B12 gene
chr17	35169823	35171112	-	35169823	35170861	A5SS	0.5	50	50	ENSMUST00000174039.8	ENSMUSG00000092203.8	1110038B12Rik	chr17	lncRNA	RIKEN cDNA 1110038B12 gene
chr17	35169823	35171112	-	35170901	35171112	3pMXE	0.5	50	50	ENSMUST00000174173.2	ENSMUSG00000092203.8	1110038B12Rik	chr17	lncRNA	RIKEN cDNA 1110038B12 gene
chr17	35201061	35204085	+	35201061	35201596	3pMXE	0.5	50	50	ENSMUST00000172523.2	ENSMUSG00000007050.18	Lsm2	chr17	protein_coding	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
chr17	35201129	35201596	+	35201061	35201596	A5SS	0.25	50	50	ENSMUST00000172523.2	ENSMUSG00000007050.18	Lsm2	chr17	protein_coding	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
chr17	35201210	35201596	+	35201061	35201596	A5SS	0.25	50	50	ENSMUST00000172523.2	ENSMUSG00000007050.18	Lsm2	chr17	protein_coding	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
chr17	35201343	35201596	+	35201061	35201596	A5SS	0.25	50	50	ENSMUST00000172523.2	ENSMUSG00000007050.18	Lsm2	chr17	protein_coding	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
chr17	35201061	35204085	+	35201061;35201663	35201596;35204085	ES	0.33	50	50	ENSMUST00000114011.11	ENSMUSG00000007050.18	Lsm2	chr17	protein_coding	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
chr17	35201663;35203984	35203956;35204085	+	35201663	35204085	cassetteExon	0.5	100	100	ENSMUST00000114011.11	ENSMUSG00000007050.18	Lsm2	chr17	protein_coding	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
chr17	35203984	35204085	+	35201061	35204085	A5SS	0.33	50	50	ENSMUST00000174241.8	ENSMUSG00000007050.18	Lsm2	chr17	protein_coding	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
chr17	35201210	35201596	+	35201129	35201596	A5SS	0.25	50	50	ENSMUST00000174326.8	ENSMUSG00000007050.18	Lsm2	chr17	protein_coding	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
chr17	35201343	35201596	+	35201129	35201596	A5SS	0.25	50	50	ENSMUST00000174326.8	ENSMUSG00000007050.18	Lsm2	chr17	protein_coding	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
chr17	35201210	35201596	+	35201343	35201596	A5SS	0.25	50	50	ENSMUST00000007266.14	ENSMUSG00000007050.18	Lsm2	chr17	protein_coding	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
chr17	35201210	35201617	+	35201210	35201596	A3SS	0.5	50	50	ENSMUST00000172777.8	ENSMUSG00000007050.18	Lsm2	chr17	protein_coding	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
chr17	35201061	35204085	+	35201663	35204085	5pMXE	0.33	50	50	ENSMUST00000174860.8	ENSMUSG00000007050.18	Lsm2	chr17	protein_coding	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
chr17	35201663	35204085	+	35201663	35203956	A3SS	0.5	50	50	ENSMUST00000174434.8	ENSMUSG00000007050.18	Lsm2	chr17	protein_coding	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
chr17	35233337	35233913	+	35233337;35233753	35233598;35233913	ES	0.5	50	50	ENSMUST00000087315.14	ENSMUSG00000007029.17	Vars	chr17	protein_coding	valyl-tRNA synthetase
chr17	35221700	35223181	+	35220806	35223181	A5SS	0.33	50	50	ENSMUST00000087315.14	ENSMUSG00000007029.17	Vars	chr17	protein_coding	valyl-tRNA synthetase
chr17	35221876	35223181	+	35220806	35223181	A5SS	0.33	50	50	ENSMUST00000087315.14	ENSMUSG00000007029.17	Vars	chr17	protein_coding	valyl-tRNA synthetase
chr17	35221876	35223181	+	35221700	35223181	A5SS	0.33	50	50	ENSMUST00000172570.2	ENSMUSG00000007029.17	Vars	chr17	protein_coding	valyl-tRNA synthetase
chr17	35240236	35240550	+	35240236	35240487	A3SS	0.5	50	50	ENSMUST00000007245.8	ENSMUSG00000007030.9	Vwa7	chr17	protein_coding	von Willebrand factor A domain containing 7
chr17	35246560	35246773	-	35246564	35246773	A3SS	0.5	50	50	ENSMUST00000174037.8	ENSMUSG00000036185.10	Sapcd1	chr17	protein_coding	suppressor APC domain containing 1
chr17	35260491	35262705	-	35260491;35261156	35261074;35262705	ES	0.5	50	50	ENSMUST00000007250.14	ENSMUSG00000007035.16	Msh5	chr17	protein_coding	mutS homolog 5
chr17	35261156	35263001	-	35261156;35262740	35262705;35263001	ES	0.5	50	50	ENSMUST00000007250.14	ENSMUSG00000007035.16	Msh5	chr17	protein_coding	mutS homolog 5
chr17	35264350	35265207	-	35264350;35265029	35264906;35265207	ES	0.5	50	50	ENSMUST00000007250.14	ENSMUSG00000007035.16	Msh5	chr17	protein_coding	mutS homolog 5
chr17	35249636	35250124	-	35249734	35250124	A3SS	0.33	50	50	ENSMUST00000007250.14	ENSMUSG00000007035.16	Msh5	chr17	protein_coding	mutS homolog 5
chr17	35249730	35250124	-	35249734	35250124	A3SS	0.33	50	50	ENSMUST00000007250.14	ENSMUSG00000007035.16	Msh5	chr17	protein_coding	mutS homolog 5
chr17	35250732	35251317	-	35250742	35251317	A3SS	0.33	50	50	ENSMUST00000007250.14	ENSMUSG00000007035.16	Msh5	chr17	protein_coding	mutS homolog 5
chr17	35250878	35251317	-	35250742	35251317	A3SS	0.33	50	50	ENSMUST00000007250.14	ENSMUSG00000007035.16	Msh5	chr17	protein_coding	mutS homolog 5
chr17	35258394	35260446	-	35258315	35260446	A3SS	0.5	50	50	ENSMUST00000007250.14	ENSMUSG00000007035.16	Msh5	chr17	protein_coding	mutS homolog 5
chr17	35251397	35251615	-	35251397	35251736	A5SS	0.5	50	50	ENSMUST00000007250.14	ENSMUSG00000007035.16	Msh5	chr17	protein_coding	mutS homolog 5
chr17	35265029	35265242	-	35265029	35265207	A5SS	0.5	50	50	ENSMUST00000007250.14	ENSMUSG00000007035.16	Msh5	chr17	protein_coding	mutS homolog 5
chr17	35249636	35250124	-	35249730	35250124	A3SS	0.33	50	50	ENSMUST00000174026.8	ENSMUSG00000007035.16	Msh5	chr17	protein_coding	mutS homolog 5
chr17	35250732	35251317	-	35250878	35251317	A3SS	0.33	50	50	ENSMUST00000174026.8	ENSMUSG00000007035.16	Msh5	chr17	protein_coding	mutS homolog 5
chr17	35260491;35262740	35262705;35263001	-	35260491;35261156	35261074;35263001	MXE	0.5	100	100	ENSMUST00000174556.8	ENSMUSG00000007035.16	Msh5	chr17	protein_coding	mutS homolog 5
chr17	35264350	35265207	-	35264350	35264906	A5SS&ES	0.5	50	50	ENSMUST00000174556.8	ENSMUSG00000007035.16	Msh5	chr17	protein_coding	mutS homolog 5
chr17	35278940	35279079	+	35278248	35279079	A5SS	0.5	50	50	ENSMUST00000007255.13	ENSMUSG00000007039.13	Ddah2	chr17	protein_coding	dimethylarginine dimethylaminohydrolase 2
chr17	35280575	35280767	+	35280601	35280767	A5SS	0.5	50	50	ENSMUST00000007255.13	ENSMUSG00000007039.13	Ddah2	chr17	protein_coding	dimethylarginine dimethylaminohydrolase 2
chr17	35283412;35283932	35283662;35284295	-	35283412	35284295	cassetteExon	0.5	100	100	ENSMUST00000097337.8	ENSMUSG00000073414.9	Mpig6b	chr17	protein_coding	megakaryocyte and platelet inhibitory receptor G6b
chr17	35293288	35296773	-	35293288	35293386	5pMXE	0.5	50	50	ENSMUST00000007259.4	ENSMUSG00000073413.10	Ly6g6d	chr17	protein_coding	lymphocyte antigen 6 complex, locus G6D
chr17	35293332	35296773	-	35293288	35296773	A3SS	0.5	50	50	ENSMUST00000172639.8	ENSMUSG00000073413.10	Ly6g6d	chr17	protein_coding	lymphocyte antigen 6 complex, locus G6D
chr17	35295966	35296111	+	35295935	35296111	A5SS	0.5	50	50	ENSMUST00000172494.8	ENSMUSG00000013766.12	Ly6g6e	chr17	protein_coding	lymphocyte antigen 6 complex, locus G6E
chr17	35296938	35297035	+	35296910	35297035	A5SS	0.5	50	50	ENSMUST00000172494.8	ENSMUSG00000013766.12	Ly6g6e	chr17	protein_coding	lymphocyte antigen 6 complex, locus G6E
chr17	35309401	35310547	+	35309401;35310064	35309998;35310547	ES	0.5	50	50	ENSMUST00000173134.8	ENSMUSG00000007036.16	Abhd16a	chr17	protein_coding	abhydrolase domain containing 16A
chr17	35309264	35309345	+	35308432	35309345	A5SS	0.5	50	50	ENSMUST00000173134.8	ENSMUSG00000007036.16	Abhd16a	chr17	protein_coding	abhydrolase domain containing 16A
chr17	35310633	35310795	+	35310633	35313227	A3SS	0.5	50	50	ENSMUST00000007251.14	ENSMUSG00000007036.16	Abhd16a	chr17	protein_coding	abhydrolase domain containing 16A
chr17	35319664	35319861	+	35319664	35319938	A3SS	0.5	50	50	ENSMUST00000007251.14	ENSMUSG00000007036.16	Abhd16a	chr17	protein_coding	abhydrolase domain containing 16A
chr17	35339503	35340770	-	35339503	35340287	5pMXE	0.25	50	50	ENSMUST00000173114.8	ENSMUSG00000024387.14	Csnk2b	chr17	protein_coding	casein kinase 2, beta polypeptide
chr17	35335505	35336672	-	35335401	35336672	A3SS	0.5	50	50	ENSMUST00000173114.8	ENSMUSG00000024387.14	Csnk2b	chr17	protein_coding	casein kinase 2, beta polypeptide
chr17	35336898	35336972	-	35336861	35336972	A3SS	0.5	50	50	ENSMUST00000173114.8	ENSMUSG00000024387.14	Csnk2b	chr17	protein_coding	casein kinase 2, beta polypeptide
chr17	35339772	35340287	-	35339503	35340287	A3SS	0.5	50	50	ENSMUST00000173114.8	ENSMUSG00000024387.14	Csnk2b	chr17	protein_coding	casein kinase 2, beta polypeptide
chr17	35339503	35339984	-	35339503	35340287	A5SS	0.25	50	50	ENSMUST00000173114.8	ENSMUSG00000024387.14	Csnk2b	chr17	protein_coding	casein kinase 2, beta polypeptide
chr17	35339503	35340098	-	35339503	35340287	A5SS	0.25	50	50	ENSMUST00000173114.8	ENSMUSG00000024387.14	Csnk2b	chr17	protein_coding	casein kinase 2, beta polypeptide
chr17	35339503	35340770	-	35339503	35340098	5pMXE	0.25	50	50	ENSMUST00000025246.13	ENSMUSG00000024387.14	Csnk2b	chr17	protein_coding	casein kinase 2, beta polypeptide
chr17	35339503	35339984	-	35339503	35340098	A5SS	0.25	50	50	ENSMUST00000025246.13	ENSMUSG00000024387.14	Csnk2b	chr17	protein_coding	casein kinase 2, beta polypeptide
chr17	35339503;35340487	35340098;35340770	-	35339503	35340770	cassetteExon	0.5	100	100	ENSMUST00000172765.9	ENSMUSG00000024387.14	Csnk2b	chr17	protein_coding	casein kinase 2, beta polypeptide
chr17	35339503;35340487	35340287;35340770	-	35339503	35340770	cassetteExon	0.5	100	100	ENSMUST00000172765.9	ENSMUSG00000024387.14	Csnk2b	chr17	protein_coding	casein kinase 2, beta polypeptide
chr17	35339503	35339984	-	35339503	35340770	A5SS	0.25	50	50	ENSMUST00000172765.9	ENSMUSG00000024387.14	Csnk2b	chr17	protein_coding	casein kinase 2, beta polypeptide
chr17	35340526	35342029	+	35340526;35341436	35341205;35342029	ES	0.33	50	50	ENSMUST00000173380.2	ENSMUSG00000092417.4	Gpank1	chr17	protein_coding	G patch domain and ankyrin repeats 1
chr17	35340774	35341205	+	35340526	35341205	A5SS	0.5	50	50	ENSMUST00000173380.2	ENSMUSG00000092417.4	Gpank1	chr17	protein_coding	G patch domain and ankyrin repeats 1
chr17	35340774	35342029	+	35341436	35342029	A5SS&ES	0.33	50	50	ENSMUST00000173380.2	ENSMUSG00000092417.4	Gpank1	chr17	protein_coding	G patch domain and ankyrin repeats 1
chr17	35340774	35342029	+	35340526	35342029	A5SS	0.33	50	50	ENSMUST00000173043.4	ENSMUSG00000092417.4	Gpank1	chr17	protein_coding	G patch domain and ankyrin repeats 1
chr17	35340774;35341436	35341205;35342029	+	35340774	35342029	cassetteExon	0.5	100	100	ENSMUST00000165306.3	ENSMUSG00000092417.4	Gpank1	chr17	protein_coding	G patch domain and ankyrin repeats 1
chr17	35340774	35342029	+	35340774	35341205	3pMXE	0.5	50	50	ENSMUST00000177018.2	ENSMUSG00000092417.4	Gpank1	chr17	protein_coding	G patch domain and ankyrin repeats 1
chr17	35365329	35366117	+	35365329;35365879	35365733;35366117	ES	0.5	50	50	ENSMUST00000166426.9	ENSMUSG00000024392.18	Bag6	chr17	protein_coding	BCL2-associated athanogene 6
chr17	35357758;35358052	35357999;35358211	+	35357758	35358211	cassetteExon	0.5	100	100	ENSMUST00000166426.9	ENSMUSG00000024392.18	Bag6	chr17	protein_coding	BCL2-associated athanogene 6
chr17	35361360;35361581	35361474;35361703	+	35361360	35361703	cassetteExon	0.5	100	100	ENSMUST00000166426.9	ENSMUSG00000024392.18	Bag6	chr17	protein_coding	BCL2-associated athanogene 6
chr17	35361815	35361902	+	35361815	35361899	A3SS	0.5	50	50	ENSMUST00000166426.9	ENSMUSG00000024392.18	Bag6	chr17	protein_coding	BCL2-associated athanogene 6
chr17	35365145	35365243	+	35365145	35365222	A3SS	0.5	50	50	ENSMUST00000166426.9	ENSMUSG00000024392.18	Bag6	chr17	protein_coding	BCL2-associated athanogene 6
chr17	35354604	35355091	+	35354447	35355091	A5SS	0.25	50	50	ENSMUST00000166426.9	ENSMUSG00000024392.18	Bag6	chr17	protein_coding	BCL2-associated athanogene 6
chr17	35354789	35355091	+	35354447	35355091	A5SS	0.25	50	50	ENSMUST00000166426.9	ENSMUSG00000024392.18	Bag6	chr17	protein_coding	BCL2-associated athanogene 6
chr17	35354980	35355091	+	35354447	35355091	A5SS	0.25	50	50	ENSMUST00000166426.9	ENSMUSG00000024392.18	Bag6	chr17	protein_coding	BCL2-associated athanogene 6
chr17	35361360	35361703	+	35361360	35361474	3pMXE	0.5	50	50	ENSMUST00000173535.8	ENSMUSG00000024392.18	Bag6	chr17	protein_coding	BCL2-associated athanogene 6
chr17	35354789	35355091	+	35354604	35355091	A5SS	0.25	50	50	ENSMUST00000173535.8	ENSMUSG00000024392.18	Bag6	chr17	protein_coding	BCL2-associated athanogene 6
chr17	35354980	35355091	+	35354604	35355091	A5SS	0.25	50	50	ENSMUST00000173535.8	ENSMUSG00000024392.18	Bag6	chr17	protein_coding	BCL2-associated athanogene 6
chr17	35354789	35355091	+	35354980	35355091	A5SS	0.25	50	50	ENSMUST00000174281.9	ENSMUSG00000024392.18	Bag6	chr17	protein_coding	BCL2-associated athanogene 6
chr17	35365329	35366117	+	35365879	35366117	5pMXE	0.5	50	50	ENSMUST00000172882.2	ENSMUSG00000024392.18	Bag6	chr17	protein_coding	BCL2-associated athanogene 6
chr17	35369878	35371594	-	35369881	35371594	A3SS	0.5	50	50	ENSMUST00000025253.12	ENSMUSG00000024393.15	Prrc2a	chr17	protein_coding	proline-rich coiled-coil 2A
chr17	35382022	35383711	-	35377155	35383711	A3SS	0.5	50	50	ENSMUST00000172929.2	ENSMUSG00000024393.15	Prrc2a	chr17	protein_coding	proline-rich coiled-coil 2A
chr17	35377155	35377369	-	35377155	35383711	A5SS	0.5	50	50	ENSMUST00000172929.2	ENSMUSG00000024393.15	Prrc2a	chr17	protein_coding	proline-rich coiled-coil 2A
chr17	35391322	35392117	-	35391322	35391491	5pMXE	0.5	50	50	ENSMUST00000172693.8	ENSMUSG00000024397.15	Aif1	chr17	protein_coding	allograft inflammatory factor 1
chr17	35390915	35391104	-	35390780	35391104	A3SS	0.5	50	50	ENSMUST00000172693.8	ENSMUSG00000024397.15	Aif1	chr17	protein_coding	allograft inflammatory factor 1
chr17	35391322	35392117	-	35391322;35391665	35391491;35392117	ES	0.5	50	50	ENSMUST00000173324.8	ENSMUSG00000024397.15	Aif1	chr17	protein_coding	allograft inflammatory factor 1
chr17	35413659	35414112	+	35413659	35414026	A3SS	0.5	50	50	ENSMUST00000025262.6	ENSMUSG00000024399.6	Ltb	chr17	protein_coding	lymphotoxin B
chr17	35419539	35420060	-	35419539;35419881	35419834;35420060	ES	0.5	50	50	ENSMUST00000025263.15	ENSMUSG00000024401.15	Tnf	chr17	protein_coding	tumor necrosis factor
chr17	35454534	35456093	+	35452866	35456093	A5SS	0.25	50	50	ENSMUST00000146711.2	ENSMUSG00000024403.17	Atp6v1g2	chr17	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit G2
chr17	35454955	35456093	+	35452866	35456093	A5SS	0.25	50	50	ENSMUST00000146711.2	ENSMUSG00000024403.17	Atp6v1g2	chr17	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit G2
chr17	35455821	35456093	+	35452866	35456093	A5SS	0.25	50	50	ENSMUST00000146711.2	ENSMUSG00000024403.17	Atp6v1g2	chr17	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit G2
chr17	35454955	35456093	+	35454534	35456093	A5SS	0.33	50	50	ENSMUST00000130992.2	ENSMUSG00000024403.17	Atp6v1g2	chr17	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit G2
chr17	35455821	35456093	+	35454534	35456093	A5SS	0.33	50	50	ENSMUST00000130992.2	ENSMUSG00000024403.17	Atp6v1g2	chr17	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit G2
chr17	35455821	35456093	+	35454955	35456093	A5SS	0.25	50	50	ENSMUST00000118384.8	ENSMUSG00000024403.17	Atp6v1g2	chr17	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit G2
chr17	35460828	35462223	+	35460828	35462089	A3SS	0.5	50	50	ENSMUST00000068056.12	ENSMUSG00000019432.16	Ddx39b	chr17	protein_coding	DEAD box helicase 39b
chr17	35461599	35462089	+	35460828	35462089	A5SS	0.33	50	50	ENSMUST00000068056.12	ENSMUSG00000019432.16	Ddx39b	chr17	protein_coding	DEAD box helicase 39b
chr17	35461811	35462089	+	35460828	35462089	A5SS	0.33	50	50	ENSMUST00000068056.12	ENSMUSG00000019432.16	Ddx39b	chr17	protein_coding	DEAD box helicase 39b
chr17	35461811	35462089	+	35461599	35462089	A5SS	0.33	50	50	ENSMUST00000174795.2	ENSMUSG00000019432.16	Ddx39b	chr17	protein_coding	DEAD box helicase 39b
chr17	35485279	35485443	+	35485279	35485458	A3SS	0.5	50	50	ENSMUST00000172785.8	ENSMUSG00000073411.13	H2-D1	chr17	protein_coding	histocompatibility 2, D region locus 1
chr17	35542577;35543024	35542756;35543158	+	35542577	35543158	cassetteExon	0.5	100	100	ENSMUST00000105041.10	ENSMUSG00000079507.11	H2-Q1	chr17	protein_coding	histocompatibility 2, Q region locus 1
chr17	35661527	35661943	+	35661527;35661770	35661654;35661943	ES	0.33	50	50	ENSMUST00000071951.14	ENSMUSG00000060550.17	H2-Q7	chr17	protein_coding	histocompatibility 2, Q region locus 7
chr17	35661518	35661654	+	35661527	35661654	A5SS	0.5	50	50	ENSMUST00000071951.14	ENSMUSG00000060550.17	H2-Q7	chr17	protein_coding	histocompatibility 2, Q region locus 7
chr17	35659160;35661527	35661243;35661943	+	35659160	35661943	cassetteExon	0.5	100	100	ENSMUST00000116598.10	ENSMUSG00000060550.17	H2-Q7	chr17	protein_coding	histocompatibility 2, Q region locus 7
chr17	35661770	35661943	+	35659160	35661943	A5SS	0.33	50	50	ENSMUST00000116598.10	ENSMUSG00000060550.17	H2-Q7	chr17	protein_coding	histocompatibility 2, Q region locus 7
chr17	35661527	35661943	+	35661770	35661943	A5SS&ES	0.33	50	50	ENSMUST00000076256.8	ENSMUSG00000060550.17	H2-Q7	chr17	protein_coding	histocompatibility 2, Q region locus 7
chr17	35818966	35820000	+	35817380	35820000	A5SS	0.2	50	50	ENSMUST00000025271.17	ENSMUSG00000024406.17	Pou5f1	chr17	protein_coding	POU domain, class 5, transcription factor 1
chr17	35819730	35820000	+	35817380	35820000	A5SS	0.2	50	50	ENSMUST00000025271.17	ENSMUSG00000024406.17	Pou5f1	chr17	protein_coding	POU domain, class 5, transcription factor 1
chr17	35819769	35820000	+	35817380	35820000	A5SS	0.2	50	50	ENSMUST00000025271.17	ENSMUSG00000024406.17	Pou5f1	chr17	protein_coding	POU domain, class 5, transcription factor 1
chr17	35819793	35820000	+	35817380	35820000	A5SS	0.2	50	50	ENSMUST00000025271.17	ENSMUSG00000024406.17	Pou5f1	chr17	protein_coding	POU domain, class 5, transcription factor 1
chr17	35819730	35820000	+	35818966	35820000	A5SS	0.2	50	50	ENSMUST00000173934.8	ENSMUSG00000024406.17	Pou5f1	chr17	protein_coding	POU domain, class 5, transcription factor 1
chr17	35819769	35820000	+	35818966	35820000	A5SS	0.2	50	50	ENSMUST00000173934.8	ENSMUSG00000024406.17	Pou5f1	chr17	protein_coding	POU domain, class 5, transcription factor 1
chr17	35819793	35820000	+	35818966	35820000	A5SS	0.2	50	50	ENSMUST00000173934.8	ENSMUSG00000024406.17	Pou5f1	chr17	protein_coding	POU domain, class 5, transcription factor 1
chr17	35819769	35820000	+	35819730	35820000	A5SS	0.2	50	50	ENSMUST00000172651.8	ENSMUSG00000024406.17	Pou5f1	chr17	protein_coding	POU domain, class 5, transcription factor 1
chr17	35819793	35820000	+	35819730	35820000	A5SS	0.2	50	50	ENSMUST00000172651.8	ENSMUSG00000024406.17	Pou5f1	chr17	protein_coding	POU domain, class 5, transcription factor 1
chr17	35819769	35820000	+	35819793	35820000	A5SS	0.2	50	50	ENSMUST00000173805.8	ENSMUSG00000024406.17	Pou5f1	chr17	protein_coding	POU domain, class 5, transcription factor 1
chr17	35827436	35827608	-	35827327	35827608	A3SS	0.5	50	50	ENSMUST00000161012.8	ENSMUSG00000050410.16	Tcf19	chr17	protein_coding	transcription factor 19
chr17	35827327	35827656	-	35827327	35827608	A5SS	0.5	50	50	ENSMUST00000161012.8	ENSMUSG00000050410.16	Tcf19	chr17	protein_coding	transcription factor 19
chr17	35828126;35828836	35828688;35829114	+	35828126	35829114	cassetteExon	0.5	100	100	ENSMUST00000164242.9	ENSMUSG00000040312.15	Cchcr1	chr17	protein_coding	coiled-coil alpha-helical rod protein 1
chr17	35841196	35841299	+	35841196	35841341	A3SS	0.5	50	50	ENSMUST00000164242.9	ENSMUSG00000040312.15	Cchcr1	chr17	protein_coding	coiled-coil alpha-helical rod protein 1
chr17	35831089	35831772	+	35829489	35831772	A5SS	0.5	50	50	ENSMUST00000164242.9	ENSMUSG00000040312.15	Cchcr1	chr17	protein_coding	coiled-coil alpha-helical rod protein 1
chr17	35828126	35829114	+	35828836	35829114	5pMXE	0.5	50	50	ENSMUST00000173903.2	ENSMUSG00000040312.15	Cchcr1	chr17	protein_coding	coiled-coil alpha-helical rod protein 1
chr17	35912673;35927611	35927487;35938886	+	35912673;35925421	35925373;35938886	MXE	0.5	100	100	ENSMUST00000174521.2	ENSMUSG00000090509.3	Sfta2	chr17	protein_coding	surfactant associated 2
chr17	35961122	35961263	+	35939055	35961263	A5SS	0.5	50	50	ENSMUST00000174521.2	ENSMUSG00000090509.3	Sfta2	chr17	protein_coding	surfactant associated 2
chr17	35929174	35937269	-	35929174;35934123	35929514;35937269	ES	0.5	50	50	ENSMUST00000164502.3	ENSMUSG00000090588.3	Muc21	chr17	protein_coding	mucin 21
chr17	35934123	35937269	-	35929174	35937269	A3SS	0.5	50	50	ENSMUST00000173759.2	ENSMUSG00000090588.3	Muc21	chr17	protein_coding	mucin 21
chr17	35929174	35929514	-	35929174	35937269	A5SS	0.5	50	50	ENSMUST00000173759.2	ENSMUSG00000090588.3	Muc21	chr17	protein_coding	mucin 21
chr17	35971019	35971296	-	35971019;35971176	35971106;35971296	ES	0.5	50	50	ENSMUST00000043674.15	ENSMUSG00000038838.16	Vars2	chr17	protein_coding	valyl-tRNA synthetase 2, mitochondrial
chr17	35971489	35971616	-	35971401	35971616	A3SS	0.5	50	50	ENSMUST00000043674.15	ENSMUSG00000038838.16	Vars2	chr17	protein_coding	valyl-tRNA synthetase 2, mitochondrial
chr17	35968210	35968816	-	35968210	35969024	A5SS	0.5	50	50	ENSMUST00000043674.15	ENSMUSG00000038838.16	Vars2	chr17	protein_coding	valyl-tRNA synthetase 2, mitochondrial
chr17	35970071	35970152	-	35970071	35970154	A5SS	0.5	50	50	ENSMUST00000043674.15	ENSMUSG00000038838.16	Vars2	chr17	protein_coding	valyl-tRNA synthetase 2, mitochondrial
chr17	35977817	35977958	-	35977817	35977965	A5SS	0.5	50	50	ENSMUST00000043674.15	ENSMUSG00000038838.16	Vars2	chr17	protein_coding	valyl-tRNA synthetase 2, mitochondrial
chr17	35983055	35983578	-	35982989	35983578	A3SS	0.5	50	50	ENSMUST00000001565.15	ENSMUSG00000001524.15	Gtf2h4	chr17	protein_coding	general transcription factor II H, polypeptide 4
chr17	35981854	35982122	-	35981854	35982118	A5SS	0.5	50	50	ENSMUST00000001565.15	ENSMUSG00000001524.15	Gtf2h4	chr17	protein_coding	general transcription factor II H, polypeptide 4
chr17	35983720	35984320	-	35983720	35984448	A5SS	0.2	50	50	ENSMUST00000001565.15	ENSMUSG00000001524.15	Gtf2h4	chr17	protein_coding	general transcription factor II H, polypeptide 4
chr17	35983720	35984407	-	35983720	35984448	A5SS	0.2	50	50	ENSMUST00000001565.15	ENSMUSG00000001524.15	Gtf2h4	chr17	protein_coding	general transcription factor II H, polypeptide 4
chr17	35983720	35984418	-	35983720	35984448	A5SS	0.2	50	50	ENSMUST00000001565.15	ENSMUSG00000001524.15	Gtf2h4	chr17	protein_coding	general transcription factor II H, polypeptide 4
chr17	35983720	35984426	-	35983720	35984448	A5SS	0.2	50	50	ENSMUST00000001565.15	ENSMUSG00000001524.15	Gtf2h4	chr17	protein_coding	general transcription factor II H, polypeptide 4
chr17	35983720	35984320	-	35983720	35984426	A5SS	0.2	50	50	ENSMUST00000160734.8	ENSMUSG00000001524.15	Gtf2h4	chr17	protein_coding	general transcription factor II H, polypeptide 4
chr17	35983720	35984407	-	35983720	35984426	A5SS	0.2	50	50	ENSMUST00000160734.8	ENSMUSG00000001524.15	Gtf2h4	chr17	protein_coding	general transcription factor II H, polypeptide 4
chr17	35983720	35984418	-	35983720	35984426	A5SS	0.2	50	50	ENSMUST00000160734.8	ENSMUSG00000001524.15	Gtf2h4	chr17	protein_coding	general transcription factor II H, polypeptide 4
chr17	35983720	35984320	-	35983720	35984418	A5SS	0.2	50	50	ENSMUST00000160752.9	ENSMUSG00000001524.15	Gtf2h4	chr17	protein_coding	general transcription factor II H, polypeptide 4
chr17	35983720	35984407	-	35983720	35984418	A5SS	0.2	50	50	ENSMUST00000160752.9	ENSMUSG00000001524.15	Gtf2h4	chr17	protein_coding	general transcription factor II H, polypeptide 4
chr17	35983720	35984407	-	35983720	35984320	A5SS	0.2	50	50	ENSMUST00000162266.8	ENSMUSG00000001524.15	Gtf2h4	chr17	protein_coding	general transcription factor II H, polypeptide 4
chr17	35996442	35998037	-	35996442;35997483	35997373;35998037	ES	0.5	50	50	ENSMUST00000119825.8	ENSMUSG00000003534.18	Ddr1	chr17	protein_coding	discoidin domain receptor family, member 1
chr17	36001072	36002339	-	36001072;36002122	36002020;36002339	ES	0.5	50	50	ENSMUST00000119825.8	ENSMUSG00000003534.18	Ddr1	chr17	protein_coding	discoidin domain receptor family, member 1
chr17	36004809	36012715	-	36004809	36011323	5pMXE	0.14	50	50	ENSMUST00000119825.8	ENSMUSG00000003534.18	Ddr1	chr17	protein_coding	discoidin domain receptor family, member 1
chr17	36004809	36012896	-	36004809	36011323	5pMXE	0.14	50	50	ENSMUST00000119825.8	ENSMUSG00000003534.18	Ddr1	chr17	protein_coding	discoidin domain receptor family, member 1
chr17	36004809	36012994	-	36004809	36011323	5pMXE	0.14	50	50	ENSMUST00000119825.8	ENSMUSG00000003534.18	Ddr1	chr17	protein_coding	discoidin domain receptor family, member 1
chr17	36004809	36014816	-	36004809	36011323	5pMXE	0.14	50	50	ENSMUST00000119825.8	ENSMUSG00000003534.18	Ddr1	chr17	protein_coding	discoidin domain receptor family, member 1
chr17	36004809	36015423	-	36004809	36011323	5pMXE	0.14	50	50	ENSMUST00000119825.8	ENSMUSG00000003534.18	Ddr1	chr17	protein_coding	discoidin domain receptor family, member 1
chr17	36004557	36004680	-	36004586	36004680	A3SS	0.5	50	50	ENSMUST00000119825.8	ENSMUSG00000003534.18	Ddr1	chr17	protein_coding	discoidin domain receptor family, member 1
chr17	36004809	36008567	-	36004809	36011323	A5SS	0.14	50	50	ENSMUST00000119825.8	ENSMUSG00000003534.18	Ddr1	chr17	protein_coding	discoidin domain receptor family, member 1
chr17	36004809	36015423	-	36004809;36015031	36014816;36015423	ES	0.5	50	50	ENSMUST00000117301.8	ENSMUSG00000003534.18	Ddr1	chr17	protein_coding	discoidin domain receptor family, member 1
chr17	36004809	36008567	-	36004809	36014816	A5SS	0.14	50	50	ENSMUST00000117301.8	ENSMUSG00000003534.18	Ddr1	chr17	protein_coding	discoidin domain receptor family, member 1
chr17	36004809	36012715	-	36004809	36014816	A5SS	0.14	50	50	ENSMUST00000117301.8	ENSMUSG00000003534.18	Ddr1	chr17	protein_coding	discoidin domain receptor family, member 1
chr17	36004809	36012896	-	36004809	36014816	A5SS	0.14	50	50	ENSMUST00000117301.8	ENSMUSG00000003534.18	Ddr1	chr17	protein_coding	discoidin domain receptor family, member 1
chr17	36004809	36012994	-	36004809	36014816	A5SS	0.14	50	50	ENSMUST00000117301.8	ENSMUSG00000003534.18	Ddr1	chr17	protein_coding	discoidin domain receptor family, member 1
chr17	36004809	36012994	-	36004809	36012896	5pMXE	0.14	50	50	ENSMUST00000166980.9	ENSMUSG00000003534.18	Ddr1	chr17	protein_coding	discoidin domain receptor family, member 1
chr17	36004809	36015423	-	36004809	36012896	5pMXE	0.14	50	50	ENSMUST00000166980.9	ENSMUSG00000003534.18	Ddr1	chr17	protein_coding	discoidin domain receptor family, member 1
chr17	36004809	36008567	-	36004809	36012896	A5SS	0.14	50	50	ENSMUST00000166980.9	ENSMUSG00000003534.18	Ddr1	chr17	protein_coding	discoidin domain receptor family, member 1
chr17	36004809	36012715	-	36004809	36012896	A5SS	0.14	50	50	ENSMUST00000166980.9	ENSMUSG00000003534.18	Ddr1	chr17	protein_coding	discoidin domain receptor family, member 1
chr17	36004809	36015423	-	36004809	36014816	5pMXE	0.14	50	50	ENSMUST00000097333.10	ENSMUSG00000003534.18	Ddr1	chr17	protein_coding	discoidin domain receptor family, member 1
chr17	36004809	36012994	-	36004809	36012715	5pMXE	0.14	50	50	ENSMUST00000155628.8	ENSMUSG00000003534.18	Ddr1	chr17	protein_coding	discoidin domain receptor family, member 1
chr17	36004809	36015423	-	36004809	36012715	5pMXE	0.14	50	50	ENSMUST00000155628.8	ENSMUSG00000003534.18	Ddr1	chr17	protein_coding	discoidin domain receptor family, member 1
chr17	36004809	36008567	-	36004809	36012715	A5SS	0.14	50	50	ENSMUST00000155628.8	ENSMUSG00000003534.18	Ddr1	chr17	protein_coding	discoidin domain receptor family, member 1
chr17	36004809	36008567	-	36004809	36015423	A5SS	0.14	50	50	ENSMUST00000134995.8	ENSMUSG00000003534.18	Ddr1	chr17	protein_coding	discoidin domain receptor family, member 1
chr17	36004809	36012994	-	36004809	36015423	A5SS	0.14	50	50	ENSMUST00000134995.8	ENSMUSG00000003534.18	Ddr1	chr17	protein_coding	discoidin domain receptor family, member 1
chr17	36004809	36012994	-	36004809	36008567	5pMXE	0.14	50	50	ENSMUST00000146472.8	ENSMUSG00000003534.18	Ddr1	chr17	protein_coding	discoidin domain receptor family, member 1
chr17	36001072	36002339	-	36002122	36002339	3pMXE	0.5	50	50	ENSMUST00000145900.8	ENSMUSG00000003534.18	Ddr1	chr17	protein_coding	discoidin domain receptor family, member 1
chr17	36135094	36135458	+	36135094;36135261	36135171;36135458	ES	0.5	50	50	ENSMUST00000001569.15	ENSMUSG00000059714.14	Flot1	chr17	protein_coding	flotillin 1
chr17	36135261	36135725	+	36135261;36135601	36135458;36135725	ES	0.5	50	50	ENSMUST00000001569.15	ENSMUSG00000059714.14	Flot1	chr17	protein_coding	flotillin 1
chr17	36134487	36134699	+	36134393	36134699	A5SS	0.33	50	50	ENSMUST00000001569.15	ENSMUSG00000059714.14	Flot1	chr17	protein_coding	flotillin 1
chr17	36134522	36134699	+	36134393	36134699	A5SS	0.33	50	50	ENSMUST00000001569.15	ENSMUSG00000059714.14	Flot1	chr17	protein_coding	flotillin 1
chr17	36135094;36135601	36135458;36135725	+	36135094;36135261	36135171;36135725	MXE	0.5	100	100	ENSMUST00000174080.8	ENSMUSG00000059714.14	Flot1	chr17	protein_coding	flotillin 1
chr17	36134487	36134699	+	36134522	36134699	A5SS	0.33	50	50	ENSMUST00000173493.8	ENSMUSG00000059714.14	Flot1	chr17	protein_coding	flotillin 1
chr17	36147465	36148889	-	36147628	36148889	A3SS&ES	0.5	50	50	ENSMUST00000001566.10	ENSMUSG00000001525.11	Tubb5	chr17	protein_coding	tubulin, beta 5 class I
chr17	36159557	36159684	+	36159557	36159681	A3SS	0.5	50	50	ENSMUST00000082337.13	ENSMUSG00000061607.16	Mdc1	chr17	protein_coding	mediator of DNA damage checkpoint 1
chr17	36152657	36155324	+	36152571	36155324	A5SS	0.5	50	50	ENSMUST00000082337.13	ENSMUSG00000061607.16	Mdc1	chr17	protein_coding	mediator of DNA damage checkpoint 1
chr17	36172409	36175004	+	36172409;36174527	36174331;36175004	ES	0.5	50	50	ENSMUST00000074259.15	ENSMUSG00000059791.15	Nrm	chr17	protein_coding	nurim (nuclear envelope membrane protein)
chr17	36172409;36175180	36175004;36175403	+	36172409	36175403	cassetteExon	0.5	100	100	ENSMUST00000174873.2	ENSMUSG00000059791.15	Nrm	chr17	protein_coding	nurim (nuclear envelope membrane protein)
chr17	36172409	36174331	+	36172409	36175403	A3SS	0.33	50	50	ENSMUST00000174873.2	ENSMUSG00000059791.15	Nrm	chr17	protein_coding	nurim (nuclear envelope membrane protein)
chr17	36177120	36178122	+	36176586	36178122	A5SS	0.5	50	50	ENSMUST00000127442.8	ENSMUSG00000034595.18	Ppp1r18	chr17	protein_coding	protein phosphatase 1, regulatory subunit 18
chr17	36200492	36203311	+	36200492;36201980	36201807;36203311	ES	0.5	50	50	ENSMUST00000025292.15	ENSMUSG00000024422.15	Dhx16	chr17	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 16
chr17	36197134	36198316	+	36197134	36198291	A3SS	0.5	50	50	ENSMUST00000025292.15	ENSMUSG00000024422.15	Dhx16	chr17	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 16
chr17	36200492	36203311	+	36201980	36203311	5pMXE	0.5	50	50	ENSMUST00000174308.2	ENSMUSG00000024422.15	Dhx16	chr17	protein_coding	DEAH (Asp-Glu-Ala-His) box polypeptide 16
chr17	36206964	36208083	-	36206964	36207872	5pMXE	0.25	50	50	ENSMUST00000148482.8	ENSMUSG00000050705.16	2310061I04Rik	chr17	protein_coding	RIKEN cDNA 2310061I04 gene
chr17	36203881	36203932	-	36203858	36203932	A3SS	0.5	50	50	ENSMUST00000148482.8	ENSMUSG00000050705.16	2310061I04Rik	chr17	protein_coding	RIKEN cDNA 2310061I04 gene
chr17	36206964	36207152	-	36206964	36207872	A5SS	0.25	50	50	ENSMUST00000148482.8	ENSMUSG00000050705.16	2310061I04Rik	chr17	protein_coding	RIKEN cDNA 2310061I04 gene
chr17	36206964	36207937	-	36206964	36207872	A5SS	0.25	50	50	ENSMUST00000148482.8	ENSMUSG00000050705.16	2310061I04Rik	chr17	protein_coding	RIKEN cDNA 2310061I04 gene
chr17	36206964;36207337	36207152;36208083	-	36206964	36208083	cassetteExon	0.5	100	100	ENSMUST00000148721.8	ENSMUSG00000050705.16	2310061I04Rik	chr17	protein_coding	RIKEN cDNA 2310061I04 gene
chr17	36206964	36207937	-	36206964	36208083	A5SS	0.25	50	50	ENSMUST00000148721.8	ENSMUSG00000050705.16	2310061I04Rik	chr17	protein_coding	RIKEN cDNA 2310061I04 gene
chr17	36206964;36207337	36207152;36207937	-	36206964	36207937	cassetteExon	0.5	100	100	ENSMUST00000150056.2	ENSMUSG00000050705.16	2310061I04Rik	chr17	protein_coding	RIKEN cDNA 2310061I04 gene
chr17	36206964	36207937	-	36206964	36207152	5pMXE	0.25	50	50	ENSMUST00000151274.2	ENSMUSG00000050705.16	2310061I04Rik	chr17	protein_coding	RIKEN cDNA 2310061I04 gene
chr17	36206964	36208083	-	36206964	36207152	5pMXE	0.25	50	50	ENSMUST00000151274.2	ENSMUSG00000050705.16	2310061I04Rik	chr17	protein_coding	RIKEN cDNA 2310061I04 gene
chr17	36207337	36208083	-	36207337	36207937	5pMXE	0.5	50	50	ENSMUST00000156817.2	ENSMUSG00000050705.16	2310061I04Rik	chr17	protein_coding	RIKEN cDNA 2310061I04 gene
chr17	36206964	36208083	-	36207337	36208083	3pMXE	0.5	50	50	ENSMUST00000154272.2	ENSMUSG00000050705.16	2310061I04Rik	chr17	protein_coding	RIKEN cDNA 2310061I04 gene
chr17	36212503	36215000	-	36212503;36212946	36212875;36215000	ES	0.33	50	50	ENSMUST00000061052.12	ENSMUSG00000024426.18	Atat1	chr17	protein_coding	alpha tubulin acetyltransferase 1
chr17	36212946	36215182	-	36212946;36215068	36215000;36215182	ES	0.33	50	50	ENSMUST00000061052.12	ENSMUSG00000024426.18	Atat1	chr17	protein_coding	alpha tubulin acetyltransferase 1
chr17	36212946;36213330	36213248;36215000	-	36212946	36215000	cassetteExon	0.5	100	100	ENSMUST00000061052.12	ENSMUSG00000024426.18	Atat1	chr17	protein_coding	alpha tubulin acetyltransferase 1
chr17	36212946;36213330	36213248;36215182	-	36212946;36215068	36215000;36215182	MXE	0.5	100	100	ENSMUST00000061052.12	ENSMUSG00000024426.18	Atat1	chr17	protein_coding	alpha tubulin acetyltransferase 1
chr17	36209242	36212260	-	36209359	36212260	A3SS&ES	0.33	50	50	ENSMUST00000061052.12	ENSMUSG00000024426.18	Atat1	chr17	protein_coding	alpha tubulin acetyltransferase 1
chr17	36211764	36212260	-	36209359	36212260	A3SS	0.33	50	50	ENSMUST00000061052.12	ENSMUSG00000024426.18	Atat1	chr17	protein_coding	alpha tubulin acetyltransferase 1
chr17	36219147	36219455	-	36215227	36219455	A3SS	0.5	50	50	ENSMUST00000061052.12	ENSMUSG00000024426.18	Atat1	chr17	protein_coding	alpha tubulin acetyltransferase 1
chr17	36220383	36220526	-	36220383	36220821	A5SS	0.33	50	50	ENSMUST00000061052.12	ENSMUSG00000024426.18	Atat1	chr17	protein_coding	alpha tubulin acetyltransferase 1
chr17	36220383	36220672	-	36220383	36220821	A5SS	0.33	50	50	ENSMUST00000061052.12	ENSMUSG00000024426.18	Atat1	chr17	protein_coding	alpha tubulin acetyltransferase 1
chr17	36212946;36213330	36213248;36215182	-	36212946	36215182	cassetteExon	0.5	100	100	ENSMUST00000077494.13	ENSMUSG00000024426.18	Atat1	chr17	protein_coding	alpha tubulin acetyltransferase 1
chr17	36212503;36215068	36215000;36215182	-	36212503;36212946	36212875;36215182	MXE	0.5	100	100	ENSMUST00000077494.13	ENSMUSG00000024426.18	Atat1	chr17	protein_coding	alpha tubulin acetyltransferase 1
chr17	36211764	36212260	-	36209242	36212260	A3SS	0.33	50	50	ENSMUST00000149277.8	ENSMUSG00000024426.18	Atat1	chr17	protein_coding	alpha tubulin acetyltransferase 1
chr17	36213330	36215182	-	36213330;36215068	36215000;36215182	ES	0.33	50	50	ENSMUST00000126744.8	ENSMUSG00000024426.18	Atat1	chr17	protein_coding	alpha tubulin acetyltransferase 1
chr17	36212503;36213330	36212875;36215000	-	36212503	36215000	cassetteExon	0.5	100	100	ENSMUST00000140292.8	ENSMUSG00000024426.18	Atat1	chr17	protein_coding	alpha tubulin acetyltransferase 1
chr17	36212503;36213330	36212875;36215182	-	36212503;36215068	36215000;36215182	MXE	0.5	100	100	ENSMUST00000140292.8	ENSMUSG00000024426.18	Atat1	chr17	protein_coding	alpha tubulin acetyltransferase 1
chr17	36212503	36215000	-	36212946	36215000	3pMXE	0.33	50	50	ENSMUST00000141132.2	ENSMUSG00000024426.18	Atat1	chr17	protein_coding	alpha tubulin acetyltransferase 1
chr17	36212946	36215182	-	36215068	36215182	3pMXE	0.33	50	50	ENSMUST00000140990.8	ENSMUSG00000024426.18	Atat1	chr17	protein_coding	alpha tubulin acetyltransferase 1
chr17	36213330	36215182	-	36215068	36215182	3pMXE	0.33	50	50	ENSMUST00000140990.8	ENSMUSG00000024426.18	Atat1	chr17	protein_coding	alpha tubulin acetyltransferase 1
chr17	36220383	36220672	-	36220383	36220526	5pMXE	0.33	50	50	ENSMUST00000140990.8	ENSMUSG00000024426.18	Atat1	chr17	protein_coding	alpha tubulin acetyltransferase 1
chr17	36222370	36225226	-	36222370;36223296	36223230;36225226	ES	0.5	50	50	ENSMUST00000025305.16	ENSMUSG00000024436.17	Mrps18b	chr17	protein_coding	mitochondrial ribosomal protein S18B
chr17	36221743	36223230	-	36222370	36223230	A3SS&ES	0.5	50	50	ENSMUST00000025305.16	ENSMUSG00000024436.17	Mrps18b	chr17	protein_coding	mitochondrial ribosomal protein S18B
chr17	36225696	36226793	-	36225696	36227184	A5SS	0.5	50	50	ENSMUST00000025305.16	ENSMUSG00000024436.17	Mrps18b	chr17	protein_coding	mitochondrial ribosomal protein S18B
chr17	36222370;36225696	36225226;36227184	-	36222370;36223296	36223230;36227184	MXE	0.5	100	100	ENSMUST00000113782.10	ENSMUSG00000024436.17	Mrps18b	chr17	protein_coding	mitochondrial ribosomal protein S18B
chr17	36223296;36225696	36225226;36227184	-	36223296	36227184	cassetteExon	0.5	100	100	ENSMUST00000113782.10	ENSMUSG00000024436.17	Mrps18b	chr17	protein_coding	mitochondrial ribosomal protein S18B
chr17	36222370	36225226	-	36223296	36225226	A3SS&ES	0.5	50	50	ENSMUST00000174807.8	ENSMUSG00000024436.17	Mrps18b	chr17	protein_coding	mitochondrial ribosomal protein S18B
chr17	36222370	36225226	-	36222370	36223230	5pMXE	0.5	50	50	ENSMUST00000173737.2	ENSMUSG00000024436.17	Mrps18b	chr17	protein_coding	mitochondrial ribosomal protein S18B
chr17	36227663	36228090	+	36227490	36228090	A5SS	0.33	50	50	ENSMUST00000154856.2	ENSMUSG00000039220.17	Ppp1r10	chr17	protein_coding	protein phosphatase 1, regulatory subunit 10
chr17	36227897	36228090	+	36227490	36228090	A5SS	0.33	50	50	ENSMUST00000154856.2	ENSMUSG00000039220.17	Ppp1r10	chr17	protein_coding	protein phosphatase 1, regulatory subunit 10
chr17	36234317	36234905	+	36234317	36234929	A3SS	0.5	50	50	ENSMUST00000087211.9	ENSMUSG00000039220.17	Ppp1r10	chr17	protein_coding	protein phosphatase 1, regulatory subunit 10
chr17	36227897	36228090	+	36227663	36228090	A5SS	0.33	50	50	ENSMUST00000130124.2	ENSMUSG00000039220.17	Ppp1r10	chr17	protein_coding	protein phosphatase 1, regulatory subunit 10
chr17	36276015;36280125	36279860;36280538	-	36276015	36280538	cassetteExon	0.5	100	100	ENSMUST00000043757.15	ENSMUSG00000038762.16	Abcf1	chr17	protein_coding	ATP-binding cassette, sub-family F (GCN20), member 1
chr17	36276015	36280219	-	36276015	36280538	A5SS	0.33	50	50	ENSMUST00000043757.15	ENSMUSG00000038762.16	Abcf1	chr17	protein_coding	ATP-binding cassette, sub-family F (GCN20), member 1
chr17	36276015	36279860	-	36276015	36280219	A5SS	0.33	50	50	ENSMUST00000174128.8	ENSMUSG00000038762.16	Abcf1	chr17	protein_coding	ATP-binding cassette, sub-family F (GCN20), member 1
chr17	36289335	36290019	-	36289335	36289603	5pMXE	0.5	50	50	ENSMUST00000172429.8	ENSMUSG00000038500.16	Prr3	chr17	protein_coding	proline-rich polypeptide 3
chr17	36288962	36289273	-	36285705	36289273	A3SS	0.5	50	50	ENSMUST00000172429.8	ENSMUSG00000038500.16	Prr3	chr17	protein_coding	proline-rich polypeptide 3
chr17	36289335;36289673	36289603;36290019	-	36289335	36290019	cassetteExon	0.5	100	100	ENSMUST00000055454.14	ENSMUSG00000038500.16	Prr3	chr17	protein_coding	proline-rich polypeptide 3
chr17	36290147	36290600	-	36290147	36290241	5pMXE	0.33	50	50	ENSMUST00000173872.8	ENSMUSG00000038500.16	Prr3	chr17	protein_coding	proline-rich polypeptide 3
chr17	36290147	36290306	-	36290147	36290241	A5SS	0.33	50	50	ENSMUST00000173872.8	ENSMUSG00000038500.16	Prr3	chr17	protein_coding	proline-rich polypeptide 3
chr17	36290147	36290306	-	36290147	36290600	A5SS	0.33	50	50	ENSMUST00000172900.8	ENSMUSG00000038500.16	Prr3	chr17	protein_coding	proline-rich polypeptide 3
chr17	36289335	36290019	-	36289673	36290019	3pMXE	0.5	50	50	ENSMUST00000173417.2	ENSMUSG00000038500.16	Prr3	chr17	protein_coding	proline-rich polypeptide 3
chr17	36326548	36328133	-	36317681	36328133	A3SS	0.5	50	50	ENSMUST00000174063.2	ENSMUSG00000053835.18	H2-T24	chr17	protein_coding	histocompatibility 2, T region locus 24
chr17	36317681	36325449	-	36317681	36328133	A5SS	0.5	50	50	ENSMUST00000174063.2	ENSMUSG00000053835.18	H2-T24	chr17	protein_coding	histocompatibility 2, T region locus 24
chr17	36350266;36351221	36351117;36351370	-	36350266	36351370	cassetteExon	0.5	100	100	ENSMUST00000172633.8	ENSMUSG00000056116.19	H2-T22	chr17	protein_coding	histocompatibility 2, T region locus 22
chr17	36353004	36353234	-	36353020	36353234	A3SS	0.5	50	50	ENSMUST00000172633.8	ENSMUSG00000056116.19	H2-T22	chr17	protein_coding	histocompatibility 2, T region locus 22
chr17	36392007	36394125	-	36392007	36392134	5pMXE	0.25	50	50	ENSMUST00000184850.8	ENSMUSG00000073406.11	H2-Bl	chr17	polymorphic_pseudogene	histocompatibility 2, blastocyst
chr17	36392007	36395052	-	36392007	36392134	5pMXE	0.25	50	50	ENSMUST00000184850.8	ENSMUSG00000073406.11	H2-Bl	chr17	polymorphic_pseudogene	histocompatibility 2, blastocyst
chr17	36392007	36392368	-	36392007	36392134	A5SS	0.25	50	50	ENSMUST00000184850.8	ENSMUSG00000073406.11	H2-Bl	chr17	polymorphic_pseudogene	histocompatibility 2, blastocyst
chr17	36392007	36394125	-	36392007;36392409	36392134;36394125	ES	0.5	50	50	ENSMUST00000173080.10	ENSMUSG00000073406.11	H2-Bl	chr17	polymorphic_pseudogene	histocompatibility 2, blastocyst
chr17	36392409	36394588	-	36392409;36394400	36394125;36394588	ES	0.33	50	50	ENSMUST00000173080.10	ENSMUSG00000073406.11	H2-Bl	chr17	polymorphic_pseudogene	histocompatibility 2, blastocyst
chr17	36394326	36394588	-	36394400	36394588	A3SS	0.33	50	50	ENSMUST00000173080.10	ENSMUSG00000073406.11	H2-Bl	chr17	polymorphic_pseudogene	histocompatibility 2, blastocyst
chr17	36394824	36395052	-	36394857	36395052	A3SS	0.2	50	50	ENSMUST00000173080.10	ENSMUSG00000073406.11	H2-Bl	chr17	polymorphic_pseudogene	histocompatibility 2, blastocyst
chr17	36394831	36395052	-	36394857	36395052	A3SS	0.2	50	50	ENSMUST00000173080.10	ENSMUSG00000073406.11	H2-Bl	chr17	polymorphic_pseudogene	histocompatibility 2, blastocyst
chr17	36392409	36395052	-	36392409;36394831	36394588;36395052	ES	0.2	50	50	ENSMUST00000185167.8	ENSMUSG00000073406.11	H2-Bl	chr17	polymorphic_pseudogene	histocompatibility 2, blastocyst
chr17	36392007;36394326	36394125;36394588	-	36392007;36392409	36392134;36394588	MXE	0.5	100	100	ENSMUST00000185167.8	ENSMUSG00000073406.11	H2-Bl	chr17	polymorphic_pseudogene	histocompatibility 2, blastocyst
chr17	36392409;36394326	36394125;36394588	-	36392409	36394588	cassetteExon	0.5	100	100	ENSMUST00000185167.8	ENSMUSG00000073406.11	H2-Bl	chr17	polymorphic_pseudogene	histocompatibility 2, blastocyst
chr17	36392007;36394400	36394125;36394588	-	36392007;36392409	36392134;36394588	MXE	0.5	100	100	ENSMUST00000185167.8	ENSMUSG00000073406.11	H2-Bl	chr17	polymorphic_pseudogene	histocompatibility 2, blastocyst
chr17	36394824	36395052	-	36394831	36395052	A3SS	0.2	50	50	ENSMUST00000185167.8	ENSMUSG00000073406.11	H2-Bl	chr17	polymorphic_pseudogene	histocompatibility 2, blastocyst
chr17	36392409	36395052	-	36392409;36394857	36394588;36395052	ES	0.2	50	50	ENSMUST00000194244.6	ENSMUSG00000073406.11	H2-Bl	chr17	polymorphic_pseudogene	histocompatibility 2, blastocyst
chr17	36392409	36395052	-	36392409;36394824	36394588;36395052	ES	0.2	50	50	ENSMUST00000195833.6	ENSMUSG00000073406.11	H2-Bl	chr17	polymorphic_pseudogene	histocompatibility 2, blastocyst
chr17	36392007;36392409	36392368;36394125	-	36392007	36394125	cassetteExon	0.5	100	100	ENSMUST00000184502.8	ENSMUSG00000073406.11	H2-Bl	chr17	polymorphic_pseudogene	histocompatibility 2, blastocyst
chr17	36392007;36392409	36392368;36394588	-	36392007;36394400	36394125;36394588	MXE	0.5	100	100	ENSMUST00000184502.8	ENSMUSG00000073406.11	H2-Bl	chr17	polymorphic_pseudogene	histocompatibility 2, blastocyst
chr17	36392007;36392409	36392134;36395052	-	36392007;36394857	36394125;36395052	MXE	0.5	100	100	ENSMUST00000184502.8	ENSMUSG00000073406.11	H2-Bl	chr17	polymorphic_pseudogene	histocompatibility 2, blastocyst
chr17	36392007;36392409	36392368;36395052	-	36392007;36394857	36394125;36395052	MXE	0.5	100	100	ENSMUST00000184502.8	ENSMUSG00000073406.11	H2-Bl	chr17	polymorphic_pseudogene	histocompatibility 2, blastocyst
chr17	36392007;36392409	36392134;36395052	-	36392007	36395052	cassetteExon	0.5	100	100	ENSMUST00000183560.8	ENSMUSG00000073406.11	H2-Bl	chr17	polymorphic_pseudogene	histocompatibility 2, blastocyst
chr17	36392007;36392409	36392368;36395052	-	36392007	36395052	cassetteExon	0.5	100	100	ENSMUST00000183560.8	ENSMUSG00000073406.11	H2-Bl	chr17	polymorphic_pseudogene	histocompatibility 2, blastocyst
chr17	36394824	36395052	-	36392007	36395052	A3SS	0.2	50	50	ENSMUST00000183560.8	ENSMUSG00000073406.11	H2-Bl	chr17	polymorphic_pseudogene	histocompatibility 2, blastocyst
chr17	36394831	36395052	-	36392007	36395052	A3SS	0.2	50	50	ENSMUST00000183560.8	ENSMUSG00000073406.11	H2-Bl	chr17	polymorphic_pseudogene	histocompatibility 2, blastocyst
chr17	36394857	36395052	-	36392007	36395052	A3SS	0.2	50	50	ENSMUST00000183560.8	ENSMUSG00000073406.11	H2-Bl	chr17	polymorphic_pseudogene	histocompatibility 2, blastocyst
chr17	36392007	36394125	-	36392007	36395052	A5SS	0.25	50	50	ENSMUST00000183560.8	ENSMUSG00000073406.11	H2-Bl	chr17	polymorphic_pseudogene	histocompatibility 2, blastocyst
chr17	36392007	36394125	-	36392007	36392368	A5SS&ES	0.25	50	50	ENSMUST00000183999.8	ENSMUSG00000073406.11	H2-Bl	chr17	polymorphic_pseudogene	histocompatibility 2, blastocyst
chr17	36392409	36394125	-	36392409	36395052	A5SS	0.33	50	50	ENSMUST00000183999.8	ENSMUSG00000073406.11	H2-Bl	chr17	polymorphic_pseudogene	histocompatibility 2, blastocyst
chr17	36438384	36438501	-	36420624	36438501	A3SS	0.5	50	50	ENSMUST00000046131.16	ENSMUSG00000092243.9	Gm7030	chr17	protein_coding	predicted gene 7030
chr17	36420624	36420752	-	36420624	36438501	A5SS	0.5	50	50	ENSMUST00000046131.16	ENSMUSG00000092243.9	Gm7030	chr17	protein_coding	predicted gene 7030
chr17	36454319	36455804	-	36453271	36455804	A3SS	0.5	50	50	ENSMUST00000174094.2	ENSMUSG00000073403.12	Gm10499	chr17	transcribed_unprocessed_pseudogene	predicted gene 10499
chr17	36453271	36453391	-	36453271	36455804	A5SS	0.5	50	50	ENSMUST00000174094.2	ENSMUSG00000073403.12	Gm10499	chr17	transcribed_unprocessed_pseudogene	predicted gene 10499
chr17	36466031	36466191	+	36456094	36466191	A5SS	0.5	50	50	ENSMUST00000056774.16	ENSMUSG00000038311.14	2410017I17Rik	chr17	lncRNA	RIKEN cDNA 2410017I17 gene
chr17	36479099	36479336	-	36479183	36479336	A3SS	0.5	50	50	ENSMUST00000173353.8	ENSMUSG00000073402.12	Gm8909	chr17	protein_coding	predicted gene 8909
chr17	36476766	36478435	-	36476766	36478325	A5SS	0.5	50	50	ENSMUST00000173353.8	ENSMUSG00000073402.12	Gm8909	chr17	protein_coding	predicted gene 8909
chr17	36478600	36478682	-	36478600	36478818	A5SS	0.5	50	50	ENSMUST00000173353.8	ENSMUSG00000073402.12	Gm8909	chr17	protein_coding	predicted gene 8909
chr17	36498491	36500069	-	36498418	36500069	A3SS	0.5	50	50	ENSMUST00000025312.13	ENSMUSG00000054128.17	H2-T3	chr17	protein_coding	histocompatibility 2, T region locus 3
chr17	36498491	36500942	-	36500762	36500942	A3SS&ES	0.2	50	50	ENSMUST00000025312.13	ENSMUSG00000054128.17	H2-T3	chr17	protein_coding	histocompatibility 2, T region locus 3
chr17	36498506	36500942	-	36500762	36500942	A3SS&ES	0.2	50	50	ENSMUST00000025312.13	ENSMUSG00000054128.17	H2-T3	chr17	protein_coding	histocompatibility 2, T region locus 3
chr17	36500327	36500493	-	36500212	36500493	A3SS	0.33	50	50	ENSMUST00000025312.13	ENSMUSG00000054128.17	H2-T3	chr17	protein_coding	histocompatibility 2, T region locus 3
chr17	36500344	36500493	-	36500212	36500493	A3SS	0.33	50	50	ENSMUST00000025312.13	ENSMUSG00000054128.17	H2-T3	chr17	protein_coding	histocompatibility 2, T region locus 3
chr17	36500710	36500942	-	36500762	36500942	A3SS	0.2	50	50	ENSMUST00000025312.13	ENSMUSG00000054128.17	H2-T3	chr17	protein_coding	histocompatibility 2, T region locus 3
chr17	36500327	36500493	-	36500344	36500493	A3SS	0.33	50	50	ENSMUST00000102675.10	ENSMUSG00000054128.17	H2-T3	chr17	protein_coding	histocompatibility 2, T region locus 3
chr17	36498491	36500942	-	36500710	36500942	A3SS&ES	0.2	50	50	ENSMUST00000173577.8	ENSMUSG00000054128.17	H2-T3	chr17	protein_coding	histocompatibility 2, T region locus 3
chr17	36498506	36500942	-	36500710	36500942	A3SS&ES	0.2	50	50	ENSMUST00000173577.8	ENSMUSG00000054128.17	H2-T3	chr17	protein_coding	histocompatibility 2, T region locus 3
chr17	36497602	36500942	-	36497602	36497897	A5SS&ES	0.5	50	50	ENSMUST00000173435.8	ENSMUSG00000054128.17	H2-T3	chr17	protein_coding	histocompatibility 2, T region locus 3
chr17	36498491	36500942	-	36497602	36500942	A3SS	0.2	50	50	ENSMUST00000097329.10	ENSMUSG00000054128.17	H2-T3	chr17	protein_coding	histocompatibility 2, T region locus 3
chr17	36498506	36500942	-	36497602	36500942	A3SS	0.2	50	50	ENSMUST00000097329.10	ENSMUSG00000054128.17	H2-T3	chr17	protein_coding	histocompatibility 2, T region locus 3
chr17	36500710	36500942	-	36497602	36500942	A3SS	0.2	50	50	ENSMUST00000097329.10	ENSMUSG00000054128.17	H2-T3	chr17	protein_coding	histocompatibility 2, T region locus 3
chr17	36500762	36500942	-	36497602	36500942	A3SS	0.2	50	50	ENSMUST00000097329.10	ENSMUSG00000054128.17	H2-T3	chr17	protein_coding	histocompatibility 2, T region locus 3
chr17	36498506	36500942	-	36498491	36500942	A3SS	0.2	50	50	ENSMUST00000174101.8	ENSMUSG00000054128.17	H2-T3	chr17	protein_coding	histocompatibility 2, T region locus 3
chr17	36498491	36500069	-	36498491	36500942	A5SS	0.5	50	50	ENSMUST00000174101.8	ENSMUSG00000054128.17	H2-T3	chr17	protein_coding	histocompatibility 2, T region locus 3
chr17	36568416;36568598	36568498;36568675	-	36568416	36568675	cassetteExon	0.5	100	100	ENSMUST00000077535.5	ENSMUSG00000024446.14	Rpp21	chr17	protein_coding	ribonuclease P 21 subunit
chr17	36566961	36568305	-	36566961	36568334	A5SS	0.5	50	50	ENSMUST00000077535.5	ENSMUSG00000024446.14	Rpp21	chr17	protein_coding	ribonuclease P 21 subunit
chr17	36568416	36568675	-	36568416	36568498	A5SS	0.5	50	50	ENSMUST00000173486.8	ENSMUSG00000024446.14	Rpp21	chr17	protein_coding	ribonuclease P 21 subunit
chr17	36568416	36568675	-	36568598	36568675	A3SS	0.5	50	50	ENSMUST00000174824.2	ENSMUSG00000024446.14	Rpp21	chr17	protein_coding	ribonuclease P 21 subunit
chr17	36578112	36579501	-	36578112;36578884	36578594;36579501	ES	0.5	50	50	ENSMUST00000173665.8	ENSMUSG00000045409.17	Trim39	chr17	protein_coding	tripartite motif-containing 39
chr17	36571813	36572383	-	36571837	36572383	A3SS	0.5	50	50	ENSMUST00000173665.8	ENSMUSG00000045409.17	Trim39	chr17	protein_coding	tripartite motif-containing 39
chr17	36574129	36574621	-	36573024	36574621	A3SS	0.5	50	50	ENSMUST00000173665.8	ENSMUSG00000045409.17	Trim39	chr17	protein_coding	tripartite motif-containing 39
chr17	36574972	36578017	-	36574851	36578017	A3SS	0.5	50	50	ENSMUST00000173665.8	ENSMUSG00000045409.17	Trim39	chr17	protein_coding	tripartite motif-containing 39
chr17	36579958	36582785	-	36579958	36582229	5pMXE	0.5	50	50	ENSMUST00000113706.10	ENSMUSG00000045409.17	Trim39	chr17	protein_coding	tripartite motif-containing 39
chr17	36636600	36636970	-	36636729	36636970	A3SS	0.5	50	50	ENSMUST00000025322.14	ENSMUSG00000024448.15	H2-M10.1	chr17	protein_coding	histocompatibility 2, M region locus 10.1
chr17	36951450;36951854	36951579;36952426	-	36951450	36952426	cassetteExon	0.5	100	100	ENSMUST00000087165.11	ENSMUSG00000067201.12	H2-M9	chr17	protein_coding	histocompatibility 2, M region locus 9
chr17	37148156	37161548	+	37148156	37148357	3pMXE	0.33	50	50	ENSMUST00000124307.2	ENSMUSG00000024457.17	Trim26	chr17	protein_coding	tripartite motif-containing 26
chr17	37148156	37148389	+	37148156	37148357	A3SS	0.33	50	50	ENSMUST00000124307.2	ENSMUSG00000024457.17	Trim26	chr17	protein_coding	tripartite motif-containing 26
chr17	37148175	37148357	+	37148156	37148357	A5SS	0.5	50	50	ENSMUST00000124307.2	ENSMUSG00000024457.17	Trim26	chr17	protein_coding	tripartite motif-containing 26
chr17	37148156	37161548	+	37148156;37148464	37148389;37161548	ES	0.5	50	50	ENSMUST00000134325.8	ENSMUSG00000024457.17	Trim26	chr17	protein_coding	tripartite motif-containing 26
chr17	37148156	37161548	+	37148156;37148464	37148357;37161548	ES	0.5	50	50	ENSMUST00000179968.8	ENSMUSG00000024457.17	Trim26	chr17	protein_coding	tripartite motif-containing 26
chr17	37163585	37167094	+	37163585;37166980	37166963;37167094	ES	0.25	50	50	ENSMUST00000179968.8	ENSMUSG00000024457.17	Trim26	chr17	protein_coding	tripartite motif-containing 26
chr17	37163585;37165193	37165176;37167094	+	37163585;37166980	37166963;37167094	MXE	0.5	100	100	ENSMUST00000179968.8	ENSMUSG00000024457.17	Trim26	chr17	protein_coding	tripartite motif-containing 26
chr17	37163585;37165603	37165176;37167094	+	37163585;37166980	37166963;37167094	MXE	0.5	100	100	ENSMUST00000179968.8	ENSMUSG00000024457.17	Trim26	chr17	protein_coding	tripartite motif-containing 26
chr17	37167913	37170031	+	37167913	37168292	A3SS	0.5	50	50	ENSMUST00000179968.8	ENSMUSG00000024457.17	Trim26	chr17	protein_coding	tripartite motif-containing 26
chr17	37163585	37167094	+	37163585;37165193	37165176;37167094	ES	0.25	50	50	ENSMUST00000130367.8	ENSMUSG00000024457.17	Trim26	chr17	protein_coding	tripartite motif-containing 26
chr17	37165603	37167094	+	37165193	37167094	A5SS	0.25	50	50	ENSMUST00000130367.8	ENSMUSG00000024457.17	Trim26	chr17	protein_coding	tripartite motif-containing 26
chr17	37148156	37161548	+	37148464	37161548	A5SS&ES	0.5	50	50	ENSMUST00000144182.8	ENSMUSG00000024457.17	Trim26	chr17	protein_coding	tripartite motif-containing 26
chr17	37163585;37165603	37165176;37167094	+	37163585	37167094	cassetteExon	0.5	100	100	ENSMUST00000124136.2	ENSMUSG00000024457.17	Trim26	chr17	protein_coding	tripartite motif-containing 26
chr17	37163585	37167094	+	37165603	37167094	5pMXE	0.25	50	50	ENSMUST00000156872.2	ENSMUSG00000024457.17	Trim26	chr17	protein_coding	tripartite motif-containing 26
chr17	37166980	37167094	+	37165603	37167094	A5SS	0.25	50	50	ENSMUST00000156872.2	ENSMUSG00000024457.17	Trim26	chr17	protein_coding	tripartite motif-containing 26
chr17	37172388	37173219	-	37172474	37173219	A3SS	0.5	50	50	ENSMUST00000025329.13	ENSMUSG00000050747.15	Trim15	chr17	protein_coding	tripartite motif-containing 15
chr17	37175163	37175758	-	37175163	37175853	A5SS	0.5	50	50	ENSMUST00000025329.13	ENSMUSG00000050747.15	Trim15	chr17	protein_coding	tripartite motif-containing 15
chr17	37200245	37200869	-	37200585	37200869	A3SS	0.33	50	50	ENSMUST00000087158.11	ENSMUSG00000073399.10	Trim40	chr17	protein_coding	tripartite motif-containing 40
chr17	37193556	37194143	-	37193556	37194041	A5SS	0.5	50	50	ENSMUST00000087158.11	ENSMUSG00000073399.10	Trim40	chr17	protein_coding	tripartite motif-containing 40
chr17	37200245	37200869	-	37194256	37200869	A3SS	0.33	50	50	ENSMUST00000174107.2	ENSMUSG00000073399.10	Trim40	chr17	protein_coding	tripartite motif-containing 40
chr17	37200585	37200869	-	37194256	37200869	A3SS	0.33	50	50	ENSMUST00000174107.2	ENSMUSG00000073399.10	Trim40	chr17	protein_coding	tripartite motif-containing 40
chr17	37194256	37194858	-	37194256	37200869	A5SS	0.5	50	50	ENSMUST00000174107.2	ENSMUSG00000073399.10	Trim40	chr17	protein_coding	tripartite motif-containing 40
chr17	37260877	37261883	-	37260877	37262315	A5SS	0.5	50	50	ENSMUST00000040402.14	ENSMUSG00000036398.14	Ppp1r11	chr17	protein_coding	protein phosphatase 1, regulatory inhibitor subunit 11
chr17	37268567	37268793	-	37268567	37268724	A5SS	0.5	50	50	ENSMUST00000113669.9	ENSMUSG00000036315.14	Polr1h	chr17	protein_coding	RNA polymerase I subunit H
chr17	37269121	37269270	-	37269188	37269270	A3SS	0.5	50	50	ENSMUST00000172518.8	ENSMUSG00000036315.14	Polr1h	chr17	protein_coding	RNA polymerase I subunit H
chr17	37269687	37275249	+	37269594	37275249	A5SS	0.25	50	50	ENSMUST00000040177.7	ENSMUSG00000036214.15	Polr1has	chr17	protein_coding	RNA polymerase I subunit H, antisense
chr17	37269978	37275249	+	37269594	37275249	A5SS	0.25	50	50	ENSMUST00000040177.7	ENSMUSG00000036214.15	Polr1has	chr17	protein_coding	RNA polymerase I subunit H, antisense
chr17	37275063	37275249	+	37269594	37275249	A5SS	0.25	50	50	ENSMUST00000040177.7	ENSMUSG00000036214.15	Polr1has	chr17	protein_coding	RNA polymerase I subunit H, antisense
chr17	37269687	37275249	+	37269978	37275249	A5SS	0.25	50	50	ENSMUST00000172672.8	ENSMUSG00000036214.15	Polr1has	chr17	protein_coding	RNA polymerase I subunit H, antisense
chr17	37275063	37275249	+	37269978	37275249	A5SS	0.25	50	50	ENSMUST00000172672.8	ENSMUSG00000036214.15	Polr1has	chr17	protein_coding	RNA polymerase I subunit H, antisense
chr17	37275063	37275249	+	37269687	37275249	A5SS	0.25	50	50	ENSMUST00000173814.2	ENSMUSG00000036214.15	Polr1has	chr17	protein_coding	RNA polymerase I subunit H, antisense
chr17	37288998	37289345	-	37288998	37289361	A5SS	0.5	50	50	ENSMUST00000039846.12	ENSMUSG00000064308.11	2410137M14Rik	chr17	protein_coding	RIKEN cDNA 2410137M14 gene
chr17	37297910	37298308	-	37295994	37298308	A3SS	0.25	50	50	ENSMUST00000145260.2	ENSMUSG00000024459.19	H2-M5	chr17	protein_coding	histocompatibility 2, M region locus 5
chr17	37298047	37298308	-	37295994	37298308	A3SS	0.25	50	50	ENSMUST00000145260.2	ENSMUSG00000024459.19	H2-M5	chr17	protein_coding	histocompatibility 2, M region locus 5
chr17	37298074	37298308	-	37295994	37298308	A3SS	0.25	50	50	ENSMUST00000145260.2	ENSMUSG00000024459.19	H2-M5	chr17	protein_coding	histocompatibility 2, M region locus 5
chr17	37298822	37299827	-	37298822	37299397	A5SS	0.5	50	50	ENSMUST00000145260.2	ENSMUSG00000024459.19	H2-M5	chr17	protein_coding	histocompatibility 2, M region locus 5
chr17	37298822	37299827	-	37298822;37299672	37299397;37299827	ES	0.5	50	50	ENSMUST00000169189.8	ENSMUSG00000024459.19	H2-M5	chr17	protein_coding	histocompatibility 2, M region locus 5
chr17	37298047	37298308	-	37297910	37298308	A3SS	0.25	50	50	ENSMUST00000169189.8	ENSMUSG00000024459.19	H2-M5	chr17	protein_coding	histocompatibility 2, M region locus 5
chr17	37298074	37298308	-	37297910	37298308	A3SS	0.25	50	50	ENSMUST00000169189.8	ENSMUSG00000024459.19	H2-M5	chr17	protein_coding	histocompatibility 2, M region locus 5
chr17	37298074	37298308	-	37298047	37298308	A3SS	0.25	50	50	ENSMUST00000176712.8	ENSMUSG00000024459.19	H2-M5	chr17	protein_coding	histocompatibility 2, M region locus 5
chr17	37313669	37315689	+	37313669;37314207	37314178;37315689	ES	0.33	50	50	ENSMUST00000089968.13	ENSMUSG00000036036.16	Zfp57	chr17	protein_coding	zinc finger protein 57
chr17	37314207;37314409	37314356;37315689	+	37314207	37315689	cassetteExon	0.5	100	100	ENSMUST00000089968.13	ENSMUSG00000036036.16	Zfp57	chr17	protein_coding	zinc finger protein 57
chr17	37314207	37316942	+	37314207	37315689	A3SS&ES	0.33	50	50	ENSMUST00000089968.13	ENSMUSG00000036036.16	Zfp57	chr17	protein_coding	zinc finger protein 57
chr17	37315795	37316942	+	37315795	37316951	A3SS	0.5	50	50	ENSMUST00000089968.13	ENSMUSG00000036036.16	Zfp57	chr17	protein_coding	zinc finger protein 57
chr17	37313492	37314178	+	37313669	37314178	A5SS	0.33	50	50	ENSMUST00000089968.13	ENSMUSG00000036036.16	Zfp57	chr17	protein_coding	zinc finger protein 57
chr17	37313651	37314178	+	37313669	37314178	A5SS	0.33	50	50	ENSMUST00000089968.13	ENSMUSG00000036036.16	Zfp57	chr17	protein_coding	zinc finger protein 57
chr17	37314207	37316942	+	37314207;37315795	37315689;37316942	ES	0.5	50	50	ENSMUST00000172527.8	ENSMUSG00000036036.16	Zfp57	chr17	protein_coding	zinc finger protein 57
chr17	37313651	37314178	+	37313492	37314178	A5SS	0.33	50	50	ENSMUST00000172527.8	ENSMUSG00000036036.16	Zfp57	chr17	protein_coding	zinc finger protein 57
chr17	37313669	37315689	+	37314207	37315689	A5SS&ES	0.33	50	50	ENSMUST00000172527.8	ENSMUSG00000036036.16	Zfp57	chr17	protein_coding	zinc finger protein 57
chr17	37314207	37315689	+	37314207	37314356	3pMXE	0.33	50	50	ENSMUST00000174016.8	ENSMUSG00000036036.16	Zfp57	chr17	protein_coding	zinc finger protein 57
chr17	37314207	37316942	+	37314207	37314356	3pMXE	0.33	50	50	ENSMUST00000174016.8	ENSMUSG00000036036.16	Zfp57	chr17	protein_coding	zinc finger protein 57
chr17	37313669	37315689	+	37313669	37314178	3pMXE	0.5	50	50	ENSMUST00000174470.2	ENSMUSG00000036036.16	Zfp57	chr17	protein_coding	zinc finger protein 57
chr17	37313669;37315795	37315689;37316942	+	37313669;37314207	37314178;37316942	MXE	0.5	100	100	ENSMUST00000173588.8	ENSMUSG00000036036.16	Zfp57	chr17	protein_coding	zinc finger protein 57
chr17	37313669;37314409	37314178;37315689	+	37313669	37315689	cassetteExon	0.5	100	100	ENSMUST00000173921.8	ENSMUSG00000036036.16	Zfp57	chr17	protein_coding	zinc finger protein 57
chr17	37314207	37316942	+	37315795	37316942	5pMXE	0.5	50	50	ENSMUST00000174672.2	ENSMUSG00000036036.16	Zfp57	chr17	protein_coding	zinc finger protein 57
chr17	37322975	37325642	-	37322975;37323344	37323228;37325642	ES	0.5	50	50	ENSMUST00000102665.11	ENSMUSG00000076439.13	Mog	chr17	protein_coding	myelin oligodendrocyte glycoprotein
chr17	37362051	37365629	+	37362051;37365157	37365023;37365629	ES	0.5	50	50	ENSMUST00000025338.16	ENSMUSG00000024462.18	Gabbr1	chr17	protein_coding	gamma-aminobutyric acid (GABA) B receptor, 1
chr17	37375629	37378668	+	37375629;37378256	37378106;37378668	ES	0.5	50	50	ENSMUST00000025338.16	ENSMUSG00000024462.18	Gabbr1	chr17	protein_coding	gamma-aminobutyric acid (GABA) B receptor, 1
chr17	37358549	37360545	+	37358549	37359313	A3SS&ES	0.5	50	50	ENSMUST00000025338.16	ENSMUSG00000024462.18	Gabbr1	chr17	protein_coding	gamma-aminobutyric acid (GABA) B receptor, 1
chr17	37359498	37360545	+	37359498	37360669	A3SS	0.5	50	50	ENSMUST00000025338.16	ENSMUSG00000024462.18	Gabbr1	chr17	protein_coding	gamma-aminobutyric acid (GABA) B receptor, 1
chr17	37358549;37359498	37359313;37360545	+	37358549	37360545	cassetteExon	0.5	100	100	ENSMUST00000173823.8	ENSMUSG00000024462.18	Gabbr1	chr17	protein_coding	gamma-aminobutyric acid (GABA) B receptor, 1
chr17	37358549	37360545	+	37359498	37360545	5pMXE	0.5	50	50	ENSMUST00000173564.2	ENSMUSG00000024462.18	Gabbr1	chr17	protein_coding	gamma-aminobutyric acid (GABA) B receptor, 1
chr17	37397066	37398739	-	37397297	37398739	A3SS	0.5	50	50	ENSMUST00000217397.2	ENSMUSG00000056600.5	Olfr90	chr17	protein_coding	olfactory receptor 90
chr17	37397066	37398739	-	37397066;37397297	37397195;37398739	ES	0.5	50	50	ENSMUST00000215195.2	ENSMUSG00000056600.5	Olfr90	chr17	protein_coding	olfactory receptor 90
chr17	37404945	37408798	-	37404991	37408798	A3SS	0.5	50	50	ENSMUST00000216376.2	ENSMUSG00000095377.3	Olfr91	chr17	protein_coding	olfactory receptor 91
chr17	37423134	37430592	-	37423118	37430592	A3SS	0.5	50	50	ENSMUST00000214994.2	ENSMUSG00000096477.3	Olfr92	chr17	protein_coding	olfactory receptor 92
chr17	37493245	37493774	-	37493245	37493438	5pMXE	0.5	50	50	ENSMUST00000208970.3	ENSMUSG00000090556.6	Olfr753-ps1	chr17	polymorphic_pseudogene	olfactory receptor 753, pseudogene 1
chr17	37531578	37535946	+	37531251	37535946	A5SS	0.5	50	50	ENSMUST00000213475.2	ENSMUSG00000064121.5	Olfr96	chr17	protein_coding	olfactory receptor 96
chr17	37543770	37548035	-	37543770;37545389	37545159;37548035	ES	0.33	50	50	ENSMUST00000213328.2	ENSMUSG00000058802.6	Olfr97	chr17	protein_coding	olfactory receptor 97
chr17	37543383	37548035	-	37545389	37548035	A3SS&ES	0.33	50	50	ENSMUST00000213328.2	ENSMUSG00000058802.6	Olfr97	chr17	protein_coding	olfactory receptor 97
chr17	37543383	37548197	-	37543383	37548035	5pMXE	0.5	50	50	ENSMUST00000214622.2	ENSMUSG00000058802.6	Olfr97	chr17	protein_coding	olfactory receptor 97
chr17	37543770	37548035	-	37543383	37548035	A3SS	0.33	50	50	ENSMUST00000214622.2	ENSMUSG00000058802.6	Olfr97	chr17	protein_coding	olfactory receptor 97
chr17	37543770	37548197	-	37543383	37548197	A3SS	0.5	50	50	ENSMUST00000073667.6	ENSMUSG00000058802.6	Olfr97	chr17	protein_coding	olfactory receptor 97
chr17	37543770	37548197	-	37543770	37548035	5pMXE	0.33	50	50	ENSMUST00000214848.2	ENSMUSG00000058802.6	Olfr97	chr17	protein_coding	olfactory receptor 97
chr17	37543770	37545159	-	37543770	37548197	A5SS	0.33	50	50	ENSMUST00000216225.2	ENSMUSG00000058802.6	Olfr97	chr17	protein_coding	olfactory receptor 97
chr17	37591127	37593313	-	37591439	37593313	A3SS	0.5	50	50	ENSMUST00000216328.2	ENSMUSG00000061972.4	Olfr99	chr17	protein_coding	olfactory receptor 99
chr17	37611314	37615084	-	37611314	37613493	5pMXE	0.5	50	50	ENSMUST00000215392.2	ENSMUSG00000092077.3	Olfr101	chr17	protein_coding	olfactory receptor 101
chr17	37671408	37673050	+	37671399	37673050	A5SS	0.5	50	50	ENSMUST00000178766.3	ENSMUSG00000095858.5	Olfr104-ps	chr17	protein_coding	olfactory receptor 104, pseudogene
chr17	37690907	37693500	+	37690907	37693644	A3SS	0.5	50	50	ENSMUST00000214591.2	ENSMUSG00000094884.4	Olfr105-ps	chr17	protein_coding	olfactory receptor 105, pseudogene
chr17	37713251	37714525	+	37713251	37714768	A3SS	0.25	50	50	ENSMUST00000215947.2	ENSMUSG00000063188.5	Olfr107	chr17	protein_coding	olfactory receptor 107
chr17	37713251	37716023	+	37713251	37714768	A3SS	0.25	50	50	ENSMUST00000215947.2	ENSMUSG00000063188.5	Olfr107	chr17	protein_coding	olfactory receptor 107
chr17	37713251	37716259	+	37713251	37714768	A3SS	0.25	50	50	ENSMUST00000215947.2	ENSMUSG00000063188.5	Olfr107	chr17	protein_coding	olfactory receptor 107
chr17	37713251	37716023	+	37713251	37714525	A3SS	0.25	50	50	ENSMUST00000216844.2	ENSMUSG00000063188.5	Olfr107	chr17	protein_coding	olfactory receptor 107
chr17	37713251	37716259	+	37713251	37714525	A3SS	0.25	50	50	ENSMUST00000216844.2	ENSMUSG00000063188.5	Olfr107	chr17	protein_coding	olfactory receptor 107
chr17	37713251	37716023	+	37713251	37716259	A3SS	0.25	50	50	ENSMUST00000215974.2	ENSMUSG00000063188.5	Olfr107	chr17	protein_coding	olfactory receptor 107
chr17	37769915	37777097	+	37769915;37770607	37770241;37777097	ES	0.33	50	50	ENSMUST00000214668.2	ENSMUSG00000029184.6	Olfr109	chr17	protein_coding	olfactory receptor 109
chr17	37769915;37776737	37776625;37777097	+	37769915;37770607	37770241;37777097	MXE	0.5	100	100	ENSMUST00000214668.2	ENSMUSG00000029184.6	Olfr109	chr17	protein_coding	olfactory receptor 109
chr17	37769915;37776737	37776625;37777097	+	37769915	37777097	cassetteExon	0.5	100	100	ENSMUST00000217602.2	ENSMUSG00000029184.6	Olfr109	chr17	protein_coding	olfactory receptor 109
chr17	37803531	37809490	+	37803388	37809490	A5SS	0.5	50	50	ENSMUST00000168318.3	ENSMUSG00000090894.5	Olfr110	chr17	protein_coding	olfactory receptor 110
chr17	37836873	37840816	+	37819015	37840816	A5SS	0.5	50	50	ENSMUST00000214259.2	ENSMUSG00000090675.3	Olfr111	chr17	protein_coding	olfactory receptor 111
chr17	37901268;37902216	37902016;37903524	-	37901268	37903524	cassetteExon	0.5	100	100	ENSMUST00000214871.2	ENSMUSG00000062629.5	Olfr114	chr17	protein_coding	olfactory receptor 114
chr17	37921672	37922816	-	37921672;37922604	37922279;37922816	ES	0.5	50	50	ENSMUST00000221552.2	ENSMUSG00000092413.7	Olfr115	chr17	protein_coding	olfactory receptor 115
chr17	37935550	37936340	-	37922942	37936340	A3SS	0.5	50	50	ENSMUST00000223366.2	ENSMUSG00000092413.7	Olfr115	chr17	protein_coding	olfactory receptor 115
chr17	37973282	37974399	-	37973282	37974077	A5SS	0.5	50	50	ENSMUST00000215414.2	ENSMUSG00000095286.4	Olfr117	chr17	protein_coding	olfactory receptor 117
chr17	37978975	37982913	+	37978165	37982913	A5SS	0.5	50	50	ENSMUST00000215811.2	ENSMUSG00000080990.3	Olfr118	chr17	protein_coding	olfactory receptor 118
chr17	38007639	38011560	+	38007639;38007892	38007812;38011560	ES	0.5	50	50	ENSMUST00000213732.2	ENSMUSG00000059964.10	Olfr119	chr17	protein_coding	olfactory receptor 119
chr17	38059841;38060092	38060012;38062744	+	38059841	38062744	cassetteExon	0.5	100	100	ENSMUST00000074555.8	ENSMUSG00000060017.9	Olfr121	chr17	protein_coding	olfactory receptor 121
chr17	38082315	38082543	+	38079593	38082543	A5SS	0.5	50	50	ENSMUST00000172582.5	ENSMUSG00000083947.6	Olfr122	chr17	protein_coding	olfactory receptor 122
chr17	38104819	38106328	+	38104437	38106328	A5SS	0.5	50	50	ENSMUST00000216051.3	ENSMUSG00000045202.7	Olfr123	chr17	protein_coding	olfactory receptor 123
chr17	38113466;38114509	38114390;38115478	+	38113466	38115478	cassetteExon	0.5	100	100	ENSMUST00000215168.2	ENSMUSG00000044985.7	Olfr124	chr17	protein_coding	olfactory receptor 124
chr17	38110984	38113292	+	38111069	38113292	A5SS	0.33	50	50	ENSMUST00000215168.2	ENSMUSG00000044985.7	Olfr124	chr17	protein_coding	olfactory receptor 124
chr17	38112121	38113292	+	38111069	38113292	A5SS	0.33	50	50	ENSMUST00000215168.2	ENSMUSG00000044985.7	Olfr124	chr17	protein_coding	olfactory receptor 124
chr17	38112121	38113292	+	38110984	38113292	A5SS	0.33	50	50	ENSMUST00000216478.2	ENSMUSG00000044985.7	Olfr124	chr17	protein_coding	olfactory receptor 124
chr17	38158982	38161460	+	38158982;38160695	38160626;38161460	ES	0.5	50	50	ENSMUST00000213844.2	ENSMUSG00000109212.4	Olfr126	chr17	protein_coding	olfactory receptor 126
chr17	38374952;38377107	38376930;38377675	+	38374952	38377675	cassetteExon	0.5	100	100	ENSMUST00000215726.2	ENSMUSG00000094878.3	Olfr130	chr17	protein_coding	olfactory receptor 130
chr17	38395739	38399430	-	38395739;38398010	38397911;38399430	ES	0.5	50	50	ENSMUST00000216523.2	ENSMUSG00000043312.7	Olfr131	chr17	protein_coding	olfactory receptor 131
chr17	38393974	38395651	-	38393884	38395651	A3SS	0.5	50	50	ENSMUST00000216523.2	ENSMUSG00000043312.7	Olfr131	chr17	protein_coding	olfactory receptor 131
chr17	38456447	38459392	+	38456447;38457838	38457754;38459392	ES	0.5	50	50	ENSMUST00000215078.3	ENSMUSG00000063240.7	Olfr133	chr17	protein_coding	olfactory receptor 133
chr17	38457838	38459462	+	38457838	38459392	A3SS	0.5	50	50	ENSMUST00000215078.3	ENSMUSG00000063240.7	Olfr133	chr17	protein_coding	olfactory receptor 133
chr17	38456447	38459392	+	38456447	38457754	A3SS&ES	0.5	50	50	ENSMUST00000173610.2	ENSMUSG00000063240.7	Olfr133	chr17	protein_coding	olfactory receptor 133
chr17	38574061	38585644	+	38574061;38584907	38584845;38585644	ES	0.5	50	50	ENSMUST00000173841.3	ENSMUSG00000057443.14	Olfr138	chr17	protein_coding	olfactory receptor 138
chr17	38640815;38642600	38642531;38643625	+	38640815	38643625	cassetteExon	0.5	100	100	ENSMUST00000208539.3	ENSMUSG00000096840.4	Olfr136	chr17	protein_coding	olfactory receptor 136
chr17	38640815;38642704	38642531;38643625	+	38640815	38643625	cassetteExon	0.5	100	100	ENSMUST00000208539.3	ENSMUSG00000096840.4	Olfr136	chr17	protein_coding	olfactory receptor 136
chr17	38642704	38643625	+	38642600	38643625	A5SS	0.33	50	50	ENSMUST00000208525.3	ENSMUSG00000096840.4	Olfr136	chr17	protein_coding	olfactory receptor 136
chr17	40873883	40882760	+	40873883	40876023	3pMXE	0.5	50	50	ENSMUST00000097324.4	ENSMUSG00000092043.3	Esp6	chr17	protein_coding	exocrine gland secreted peptide 6
chr17	41101555	41102750	-	41101555;41101862	41101692;41102750	ES	0.5	50	50	ENSMUST00000232709.2	ENSMUSG00000023930.15	Crisp2	chr17	protein_coding	cysteine-rich secretory protein 2
chr17	41104211	41105371	-	41104211	41104919	5pMXE	0.33	50	50	ENSMUST00000232709.2	ENSMUSG00000023930.15	Crisp2	chr17	protein_coding	cysteine-rich secretory protein 2
chr17	41104211	41117626	-	41104211	41104919	5pMXE	0.33	50	50	ENSMUST00000232709.2	ENSMUSG00000023930.15	Crisp2	chr17	protein_coding	cysteine-rich secretory protein 2
chr17	41078265;41091034	41090954;41094129	-	41078265	41094129	cassetteExon	0.5	100	100	ENSMUST00000232709.2	ENSMUSG00000023930.15	Crisp2	chr17	protein_coding	cysteine-rich secretory protein 2
chr17	41097160	41101478	-	41097146	41101478	A3SS	0.5	50	50	ENSMUST00000232709.2	ENSMUSG00000023930.15	Crisp2	chr17	protein_coding	cysteine-rich secretory protein 2
chr17	41101555	41102768	-	41101555	41101692	A5SS&ES	0.33	50	50	ENSMUST00000232709.2	ENSMUSG00000023930.15	Crisp2	chr17	protein_coding	cysteine-rich secretory protein 2
chr17	41104211	41117626	-	41104211	41105371	5pMXE	0.33	50	50	ENSMUST00000233529.2	ENSMUSG00000023930.15	Crisp2	chr17	protein_coding	cysteine-rich secretory protein 2
chr17	41101555	41102768	-	41101555	41102750	A5SS	0.33	50	50	ENSMUST00000233529.2	ENSMUSG00000023930.15	Crisp2	chr17	protein_coding	cysteine-rich secretory protein 2
chr17	41122253	41139641	+	41122253;41139437	41139254;41139641	ES	0.5	50	50	ENSMUST00000024721.8	ENSMUSG00000023926.9	Rhag	chr17	protein_coding	Rhesus blood group-associated A glycoprotein
chr17	41146978	41150599	+	41146978;41147381	41147308;41150599	ES	0.5	50	50	ENSMUST00000024721.8	ENSMUSG00000023926.9	Rhag	chr17	protein_coding	Rhesus blood group-associated A glycoprotein
chr17	41237361	41238030	-	41235512	41238030	A3SS	0.5	50	50	ENSMUST00000087114.5	ENSMUSG00000023919.9	Cenpq	chr17	protein_coding	centromere protein Q
chr17	42987655	43003000	-	42987655	43002957	A5SS	0.25	50	50	ENSMUST00000024711.11	ENSMUSG00000023918.13	Adgrf4	chr17	protein_coding	adhesion G protein-coupled receptor F4
chr17	42987655	43003031	-	42987655	43002957	A5SS	0.25	50	50	ENSMUST00000024711.11	ENSMUSG00000023918.13	Adgrf4	chr17	protein_coding	adhesion G protein-coupled receptor F4
chr17	42987655	43003044	-	42987655	43002957	A5SS	0.25	50	50	ENSMUST00000024711.11	ENSMUSG00000023918.13	Adgrf4	chr17	protein_coding	adhesion G protein-coupled receptor F4
chr17	42987655	43003000	-	42987655	43003031	A5SS	0.25	50	50	ENSMUST00000167993.8	ENSMUSG00000023918.13	Adgrf4	chr17	protein_coding	adhesion G protein-coupled receptor F4
chr17	42987655	43003044	-	42987655	43003031	A5SS	0.25	50	50	ENSMUST00000167993.8	ENSMUSG00000023918.13	Adgrf4	chr17	protein_coding	adhesion G protein-coupled receptor F4
chr17	42987655	43003000	-	42987655	43003044	A5SS	0.25	50	50	ENSMUST00000170723.8	ENSMUSG00000023918.13	Adgrf4	chr17	protein_coding	adhesion G protein-coupled receptor F4
chr17	43156370	43187204	-	43156370;43163419	43163259;43187204	ES	0.33	50	50	ENSMUST00000024709.9	ENSMUSG00000061665.8	Cd2ap	chr17	protein_coding	CD2-associated protein
chr17	43145172	43149593	-	43145176	43149593	A3SS	0.5	50	50	ENSMUST00000024709.9	ENSMUSG00000061665.8	Cd2ap	chr17	protein_coding	CD2-associated protein
chr17	43149693;43156370	43156217;43187204	-	43149693	43187204	cassetteExon	0.5	100	100	ENSMUST00000233476.2	ENSMUSG00000061665.8	Cd2ap	chr17	protein_coding	CD2-associated protein
chr17	43163419	43187204	-	43149693	43187204	A3SS	0.33	50	50	ENSMUST00000233476.2	ENSMUSG00000061665.8	Cd2ap	chr17	protein_coding	CD2-associated protein
chr17	43462611	43462855	-	43457424	43462855	A3SS	0.5	50	50	ENSMUST00000233163.2	ENSMUSG00000117011.2	E130008D07Rik	chr17	lncRNA	RIKEN cDNA E130008D07 gene
chr17	43465305	43467307	-	43465293	43467307	A3SS	0.5	50	50	ENSMUST00000233163.2	ENSMUSG00000117011.2	E130008D07Rik	chr17	lncRNA	RIKEN cDNA E130008D07 gene
chr17	43466924	43468661	-	43467368	43468661	A3SS&ES	0.5	50	50	ENSMUST00000233163.2	ENSMUSG00000117011.2	E130008D07Rik	chr17	lncRNA	RIKEN cDNA E130008D07 gene
chr17	43465305;43467368	43467307;43468661	-	43465305;43466924	43465761;43468661	MXE	0.5	100	100	ENSMUST00000233120.2	ENSMUSG00000117011.2	E130008D07Rik	chr17	lncRNA	RIKEN cDNA E130008D07 gene
chr17	43465305	43465761	-	43465305	43467307	A5SS	0.5	50	50	ENSMUST00000232795.2	ENSMUSG00000117011.2	E130008D07Rik	chr17	lncRNA	RIKEN cDNA E130008D07 gene
chr17	43748577;43750686	43750567;43750842	+	43748577	43750842	cassetteExon	0.5	100	100	ENSMUST00000226087.2	ENSMUSG00000056492.7	Adgrf5	chr17	protein_coding	adhesion G protein-coupled receptor F5
chr17	43700598	43714809	+	43671487	43714809	A5SS	0.5	50	50	ENSMUST00000226087.2	ENSMUSG00000056492.7	Adgrf5	chr17	protein_coding	adhesion G protein-coupled receptor F5
chr17	43714988	43721393	+	43714934	43721393	A5SS	0.5	50	50	ENSMUST00000226087.2	ENSMUSG00000056492.7	Adgrf5	chr17	protein_coding	adhesion G protein-coupled receptor F5
chr17	43748577	43750842	+	43748577	43750567	A3SS	0.5	50	50	ENSMUST00000225004.2	ENSMUSG00000056492.7	Adgrf5	chr17	protein_coding	adhesion G protein-coupled receptor F5
chr17	43810322	43811135	-	43810322	43813279	A5SS	0.5	50	50	ENSMUST00000117137.8	ENSMUSG00000023914.17	Mep1a	chr17	protein_coding	meprin 1 alpha
chr17	43899594	43900255	+	43899594	43905180	A3SS	0.5	50	50	ENSMUST00000167214.8	ENSMUSG00000023913.18	Pla2g7	chr17	protein_coding	phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
chr17	43879515	43899455	+	43879061	43899455	A5SS	0.25	50	50	ENSMUST00000167214.8	ENSMUSG00000023913.18	Pla2g7	chr17	protein_coding	phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
chr17	43879677	43899455	+	43879061	43899455	A5SS	0.25	50	50	ENSMUST00000167214.8	ENSMUSG00000023913.18	Pla2g7	chr17	protein_coding	phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
chr17	43896194	43899455	+	43879061	43899455	A5SS	0.25	50	50	ENSMUST00000167214.8	ENSMUSG00000023913.18	Pla2g7	chr17	protein_coding	phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
chr17	43879677;43896194	43896126;43899455	+	43879677	43899455	cassetteExon	0.5	100	100	ENSMUST00000024706.12	ENSMUSG00000023913.18	Pla2g7	chr17	protein_coding	phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
chr17	43879515	43899455	+	43879677	43899455	A5SS	0.25	50	50	ENSMUST00000024706.12	ENSMUSG00000023913.18	Pla2g7	chr17	protein_coding	phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
chr17	43896194	43899455	+	43879515	43899455	A5SS	0.25	50	50	ENSMUST00000167418.8	ENSMUSG00000023913.18	Pla2g7	chr17	protein_coding	phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
chr17	43902344	43902736	-	43902344	43903073	A5SS	0.5	50	50	ENSMUST00000172072.8	ENSMUSG00000090307.8	1700071M16Rik	chr17	lncRNA	RIKEN cDNA 1700071M16 gene
chr17	43926794	43928061	-	43926812	43928061	A3SS	0.5	50	50	ENSMUST00000168073.9	ENSMUSG00000040140.16	Tdrd6	chr17	protein_coding	tudor domain containing 6
chr17	43933148	43934998	-	43933145	43934998	A3SS	0.5	50	50	ENSMUST00000168073.9	ENSMUSG00000040140.16	Tdrd6	chr17	protein_coding	tudor domain containing 6
chr17	43991189	43996077	+	43991189;43993988	43993839;43996077	ES	0.5	50	50	ENSMUST00000170988.2	ENSMUSG00000023963.11	Cyp39a1	chr17	protein_coding	cytochrome P450, family 39, subfamily a, polypeptide 1
chr17	44041958	44057416	+	44041958;44042904	44042816;44057416	ES	0.5	50	50	ENSMUST00000170988.2	ENSMUSG00000023963.11	Cyp39a1	chr17	protein_coding	cytochrome P450, family 39, subfamily a, polypeptide 1
chr17	44057503	44061962	+	44057503	44060795	A3SS	0.5	50	50	ENSMUST00000170988.2	ENSMUSG00000023963.11	Cyp39a1	chr17	protein_coding	cytochrome P450, family 39, subfamily a, polypeptide 1
chr17	44041958	44057416	+	44042904	44057416	5pMXE	0.5	50	50	ENSMUST00000233165.2	ENSMUSG00000023963.11	Cyp39a1	chr17	protein_coding	cytochrome P450, family 39, subfamily a, polypeptide 1
chr17	44328831	44331850	+	44328831	44331844	A3SS	0.5	50	50	ENSMUST00000228972.2	ENSMUSG00000039601.17	Rcan2	chr17	protein_coding	regulator of calcineurin 2
chr17	44112987	44147162	+	44112557	44147162	A5SS	0.33	50	50	ENSMUST00000228972.2	ENSMUSG00000039601.17	Rcan2	chr17	protein_coding	regulator of calcineurin 2
chr17	44115006	44147162	+	44112557	44147162	A5SS	0.33	50	50	ENSMUST00000228972.2	ENSMUSG00000039601.17	Rcan2	chr17	protein_coding	regulator of calcineurin 2
chr17	44264428	44328658	+	44147388	44328658	A5SS	0.5	50	50	ENSMUST00000228972.2	ENSMUSG00000039601.17	Rcan2	chr17	protein_coding	regulator of calcineurin 2
chr17	44337716	44347864	+	44332015	44347864	A5SS	0.5	50	50	ENSMUST00000228972.2	ENSMUSG00000039601.17	Rcan2	chr17	protein_coding	regulator of calcineurin 2
chr17	44115006	44147162	+	44112987	44147162	A5SS	0.33	50	50	ENSMUST00000229744.2	ENSMUSG00000039601.17	Rcan2	chr17	protein_coding	regulator of calcineurin 2
chr17	44389873	44391538	+	44389789	44391538	A5SS	0.5	50	50	ENSMUST00000154166.8	ENSMUSG00000023960.14	Enpp5	chr17	protein_coding	ectonucleotide pyrophosphatase/phosphodiesterase 5
chr17	44413555	44416602	-	44413555	44416540	A5SS	0.5	50	50	ENSMUST00000024757.14	ENSMUSG00000023961.17	Enpp4	chr17	protein_coding	ectonucleotide pyrophosphatase/phosphodiesterase 4
chr17	44499848	44548020	+	44446545	44548020	A5SS	0.5	50	50	ENSMUST00000239215.2	ENSMUSG00000023959.11	Clic5	chr17	protein_coding	chloride intracellular channel 5
chr17	44808130	44950552	-	44808130;44949592	44949400;44950552	ES	0.25	50	50	ENSMUST00000162816.8	ENSMUSG00000039153.18	Runx2	chr17	protein_coding	runt related transcription factor 2
chr17	44950713	45035632	-	44950713;45028183	45028079;45035632	ES	0.5	50	50	ENSMUST00000162816.8	ENSMUSG00000039153.18	Runx2	chr17	protein_coding	runt related transcription factor 2
chr17	45035788	45125056	-	45035788	45046120	5pMXE	0.33	50	50	ENSMUST00000162816.8	ENSMUSG00000039153.18	Runx2	chr17	protein_coding	runt related transcription factor 2
chr17	44950713;44969579	44969406;45028079	-	44950713	45028079	cassetteExon	0.5	100	100	ENSMUST00000162816.8	ENSMUSG00000039153.18	Runx2	chr17	protein_coding	runt related transcription factor 2
chr17	44919270	44950552	-	44949592	44950552	A3SS&ES	0.25	50	50	ENSMUST00000162816.8	ENSMUSG00000039153.18	Runx2	chr17	protein_coding	runt related transcription factor 2
chr17	44920980	44950552	-	44949592	44950552	A3SS&ES	0.25	50	50	ENSMUST00000162816.8	ENSMUSG00000039153.18	Runx2	chr17	protein_coding	runt related transcription factor 2
chr17	45035788	45045549	-	45035788	45046120	A5SS	0.33	50	50	ENSMUST00000162816.8	ENSMUSG00000039153.18	Runx2	chr17	protein_coding	runt related transcription factor 2
chr17	45035788	45125056	-	45035788;45046505	45046120;45125056	ES	0.5	50	50	ENSMUST00000238400.2	ENSMUSG00000039153.18	Runx2	chr17	protein_coding	runt related transcription factor 2
chr17	44919270	44950552	-	44808130	44950552	A3SS	0.25	50	50	ENSMUST00000238400.2	ENSMUSG00000039153.18	Runx2	chr17	protein_coding	runt related transcription factor 2
chr17	44920980	44950552	-	44808130	44950552	A3SS	0.25	50	50	ENSMUST00000238400.2	ENSMUSG00000039153.18	Runx2	chr17	protein_coding	runt related transcription factor 2
chr17	44919270	44950552	-	44919270;44920980	44920915;44950552	ES	0.33	50	50	ENSMUST00000113572.9	ENSMUSG00000039153.18	Runx2	chr17	protein_coding	runt related transcription factor 2
chr17	45125179	45125377	-	45125179	45125344	A5SS	0.5	50	50	ENSMUST00000113571.10	ENSMUSG00000039153.18	Runx2	chr17	protein_coding	runt related transcription factor 2
chr17	44950713	44969406	-	44950713	45035632	A5SS	0.33	50	50	ENSMUST00000162878.8	ENSMUSG00000039153.18	Runx2	chr17	protein_coding	runt related transcription factor 2
chr17	45035788	45045549	-	45035788	45125056	A5SS	0.33	50	50	ENSMUST00000113568.8	ENSMUSG00000039153.18	Runx2	chr17	protein_coding	runt related transcription factor 2
chr17	45359279	45430011	+	45359279	45430030	A3SS	0.5	50	50	ENSMUST00000050630.14	ENSMUSG00000038954.15	Supt3	chr17	protein_coding	SPT3, SAGA and STAGA complex component
chr17	45352193	45359169	+	45352273	45359169	A5SS	0.5	50	50	ENSMUST00000050630.14	ENSMUSG00000038954.15	Supt3	chr17	protein_coding	SPT3, SAGA and STAGA complex component
chr17	45722916;45723560	45723451;45724048	-	45722916	45724048	cassetteExon	0.5	100	100	ENSMUST00000024727.10	ENSMUSG00000023932.10	Cdc5l	chr17	protein_coding	cell division cycle 5-like (S. pombe)
chr17	45748115	45750057	+	45747150	45750057	A5SS	0.5	50	50	ENSMUST00000233940.2	ENSMUSG00000097119.3	B230354K17Rik	chr17	lncRNA	RIKEN cDNA B230354K17 gene
chr17	45760476;45763666	45763604;45765017	-	45760476	45765017	cassetteExon	0.5	100	100	ENSMUST00000233323.2	ENSMUSG00000023935.11	Spats1	chr17	protein_coding	spermatogenesis associated, serine-rich 1
chr17	45757009	45760361	-	45752484	45760361	A3SS	0.33	50	50	ENSMUST00000233323.2	ENSMUSG00000023935.11	Spats1	chr17	protein_coding	spermatogenesis associated, serine-rich 1
chr17	45760117	45760361	-	45752484	45760361	A3SS	0.33	50	50	ENSMUST00000233323.2	ENSMUSG00000023935.11	Spats1	chr17	protein_coding	spermatogenesis associated, serine-rich 1
chr17	45772236	45775353	-	45772236	45786127	A5SS	0.33	50	50	ENSMUST00000233323.2	ENSMUSG00000023935.11	Spats1	chr17	protein_coding	spermatogenesis associated, serine-rich 1
chr17	45772236	45785725	-	45772236	45786127	A5SS	0.33	50	50	ENSMUST00000233323.2	ENSMUSG00000023935.11	Spats1	chr17	protein_coding	spermatogenesis associated, serine-rich 1
chr17	45772236	45785725	-	45772236;45775506	45775353;45785725	ES	0.5	50	50	ENSMUST00000233769.2	ENSMUSG00000023935.11	Spats1	chr17	protein_coding	spermatogenesis associated, serine-rich 1
chr17	45760117	45760361	-	45757009	45760361	A3SS	0.33	50	50	ENSMUST00000233769.2	ENSMUSG00000023935.11	Spats1	chr17	protein_coding	spermatogenesis associated, serine-rich 1
chr17	45871573	45872996	+	45871573	45872928	A3SS	0.5	50	50	ENSMUST00000024742.9	ENSMUSG00000023947.9	Nfkbie	chr17	protein_coding	nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, epsilon
chr17	45874994	45875851	+	45874994;45875699	45875506;45875851	ES	0.5	50	50	ENSMUST00000224905.2	ENSMUSG00000037089.12	Slc35b2	chr17	protein_coding	solute carrier family 35, member B2
chr17	45876005	45876126	+	45876005	45877235	A3SS	0.33	50	50	ENSMUST00000224905.2	ENSMUSG00000037089.12	Slc35b2	chr17	protein_coding	solute carrier family 35, member B2
chr17	45876005	45876590	+	45876005	45877235	A3SS	0.33	50	50	ENSMUST00000224905.2	ENSMUSG00000037089.12	Slc35b2	chr17	protein_coding	solute carrier family 35, member B2
chr17	45875184	45875506	+	45874994	45875506	A5SS	0.5	50	50	ENSMUST00000224905.2	ENSMUSG00000037089.12	Slc35b2	chr17	protein_coding	solute carrier family 35, member B2
chr17	45874994	45875851	+	45874994	45875506	3pMXE	0.5	50	50	ENSMUST00000225226.2	ENSMUSG00000037089.12	Slc35b2	chr17	protein_coding	solute carrier family 35, member B2
chr17	45876005	45876126	+	45876005	45876590	A3SS	0.33	50	50	ENSMUST00000226086.2	ENSMUSG00000037089.12	Slc35b2	chr17	protein_coding	solute carrier family 35, member B2
chr17	45874994	45875851	+	45875699	45875851	A5SS	0.5	50	50	ENSMUST00000224559.2	ENSMUSG00000037089.12	Slc35b2	chr17	protein_coding	solute carrier family 35, member B2
chr17	45880476	45882691	-	45882545	45882691	A3SS&ES	0.5	50	50	ENSMUST00000024739.14	ENSMUSG00000023944.15	Hsp90ab1	chr17	protein_coding	heat shock protein 90 alpha (cytosolic), class B member 1
chr17	45882837	45883360	-	45882837	45884093	A5SS	0.5	50	50	ENSMUST00000024739.14	ENSMUSG00000023944.15	Hsp90ab1	chr17	protein_coding	heat shock protein 90 alpha (cytosolic), class B member 1
chr17	45896708	45898154	-	45896708;45897231	45897020;45898154	ES	0.5	50	50	ENSMUST00000163492.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45901264	45904258	-	45901264	45903105	5pMXE	0.25	50	50	ENSMUST00000163492.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45901264	45906408	-	45901264	45903105	5pMXE	0.25	50	50	ENSMUST00000163492.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45901264	45910399	-	45901264	45903105	5pMXE	0.25	50	50	ENSMUST00000163492.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45899312	45899922	-	45899312	45899928	A5SS	0.5	50	50	ENSMUST00000163492.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45901264	45910399	-	45901264;45903187	45903105;45910399	ES	0.33	50	50	ENSMUST00000171847.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45901264;45904358	45904258;45910399	-	45901264;45903187	45903105;45910399	MXE	0.5	100	100	ENSMUST00000171847.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45903187;45904358	45904258;45910399	-	45903187	45910399	cassetteExon	0.5	100	100	ENSMUST00000171847.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45903187	45906408	-	45903187	45910399	A5SS	0.2	50	50	ENSMUST00000171847.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45903187	45906721	-	45903187	45910399	A5SS	0.2	50	50	ENSMUST00000171847.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45903187	45906804	-	45903187	45910399	A5SS	0.2	50	50	ENSMUST00000171847.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45901264	45904258	-	45901264;45903187	45903105;45904258	ES	0.5	50	50	ENSMUST00000167692.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45904358	45906408	-	45904358	45904482	5pMXE	0.2	50	50	ENSMUST00000167692.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45904358	45906804	-	45904358	45904482	5pMXE	0.2	50	50	ENSMUST00000167692.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45904358	45907916	-	45904358	45904482	5pMXE	0.2	50	50	ENSMUST00000167692.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45904358	45910399	-	45904358	45904482	5pMXE	0.2	50	50	ENSMUST00000167692.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45901264	45906408	-	45901264;45903187	45903105;45906408	ES	0.2	50	50	ENSMUST00000064889.13	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45903187	45906721	-	45903187	45906408	5pMXE	0.2	50	50	ENSMUST00000064889.13	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45903187	45906804	-	45903187	45906408	5pMXE	0.2	50	50	ENSMUST00000064889.13	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45901264;45904358	45904258;45906408	-	45901264;45903187	45903105;45906408	MXE	0.5	100	100	ENSMUST00000064889.13	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45903187;45904358	45904258;45906408	-	45903187	45906408	cassetteExon	0.5	100	100	ENSMUST00000064889.13	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45901264;45904489	45904258;45906408	-	45901264;45903187	45903105;45906408	MXE	0.5	100	100	ENSMUST00000064889.13	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45903187;45904489	45904258;45906408	-	45903187	45906408	cassetteExon	0.5	100	100	ENSMUST00000064889.13	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45903269	45906408	-	45903187	45906408	A3SS	0.2	50	50	ENSMUST00000064889.13	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45901264;45904358	45904258;45906804	-	45901264;45903187	45903105;45906804	MXE	0.5	100	100	ENSMUST00000097317.10	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45903187;45904358	45904258;45906804	-	45903187	45906804	cassetteExon	0.5	100	100	ENSMUST00000097317.10	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45903187	45906721	-	45903187	45906804	A5SS	0.2	50	50	ENSMUST00000097317.10	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45896708	45898154	-	45897231	45898154	3pMXE	0.5	50	50	ENSMUST00000171978.2	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45904358	45906804	-	45904358	45906408	5pMXE	0.2	50	50	ENSMUST00000164217.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45904358	45907916	-	45904358	45906408	5pMXE	0.2	50	50	ENSMUST00000164217.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45904358	45910399	-	45904358	45906408	5pMXE	0.2	50	50	ENSMUST00000164217.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45904358;45904489	45904482;45906408	-	45904358	45906408	cassetteExon	0.5	100	100	ENSMUST00000164217.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45903269	45906408	-	45904358	45906408	A3SS&ES	0.2	50	50	ENSMUST00000164217.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45903187	45906408	-	45903187	45904258	A5SS&ES	0.2	50	50	ENSMUST00000166633.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45903187	45906721	-	45903187	45904258	A5SS&ES	0.2	50	50	ENSMUST00000166633.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45903187	45906804	-	45903187	45904258	A5SS&ES	0.2	50	50	ENSMUST00000166633.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45904358	45906804	-	45904358	45910399	A5SS	0.2	50	50	ENSMUST00000166633.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45904358	45907916	-	45904358	45910399	A5SS	0.2	50	50	ENSMUST00000166633.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45903187	45910399	-	45903187	45904258	5pMXE	0.2	50	50	ENSMUST00000163905.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45901264;45904358	45904258;45910399	-	45901264	45910399	cassetteExon	0.5	100	100	ENSMUST00000169729.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45901264	45906408	-	45901264	45910399	A5SS	0.25	50	50	ENSMUST00000169729.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45901264;45903269	45903105;45906408	-	45901264	45906408	cassetteExon	0.5	100	100	ENSMUST00000167195.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45901264;45904358	45904258;45906408	-	45901264	45906408	cassetteExon	0.5	100	100	ENSMUST00000167195.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45901264;45904489	45904258;45906408	-	45901264	45906408	cassetteExon	0.5	100	100	ENSMUST00000167195.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45901264;45904358	45904258;45906408	-	45901264;45903269	45903105;45906408	MXE	0.5	100	100	ENSMUST00000172301.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45901264;45904489	45904258;45906408	-	45901264;45903269	45903105;45906408	MXE	0.5	100	100	ENSMUST00000172301.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45903269	45906408	-	45904489	45906408	A3SS&ES	0.2	50	50	ENSMUST00000167332.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45904358	45906408	-	45904489	45906408	A3SS	0.2	50	50	ENSMUST00000167332.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45904358	45907916	-	45904358	45906804	5pMXE	0.2	50	50	ENSMUST00000170113.8	ENSMUSG00000023942.16	Slc29a1	chr17	protein_coding	solute carrier family 29 (nucleoside transporters), member 1
chr17	45912611	45912709	-	45912611	45912905	A5SS	0.25	50	50	ENSMUST00000178858.3	ENSMUSG00000079471.5	Mymx	chr17	protein_coding	myomixer, myoblast fusion factor
chr17	45912611	45912793	-	45912611	45912905	A5SS	0.25	50	50	ENSMUST00000178858.3	ENSMUSG00000079471.5	Mymx	chr17	protein_coding	myomixer, myoblast fusion factor
chr17	45912611	45912937	-	45912611	45912905	A5SS	0.25	50	50	ENSMUST00000178858.3	ENSMUSG00000079471.5	Mymx	chr17	protein_coding	myomixer, myoblast fusion factor
chr17	45912611	45912937	-	45912611	45912709	5pMXE	0.25	50	50	ENSMUST00000169137.3	ENSMUSG00000079471.5	Mymx	chr17	protein_coding	myomixer, myoblast fusion factor
chr17	45912611	45912793	-	45912611	45912709	A5SS	0.25	50	50	ENSMUST00000169137.3	ENSMUSG00000079471.5	Mymx	chr17	protein_coding	myomixer, myoblast fusion factor
chr17	45912611	45912793	-	45912611	45912937	A5SS	0.25	50	50	ENSMUST00000113529.4	ENSMUSG00000079471.5	Mymx	chr17	protein_coding	myomixer, myoblast fusion factor
chr17	45964682;45968288	45968172;45970171	-	45964682	45970171	cassetteExon	0.5	100	100	ENSMUST00000120717.8	ENSMUSG00000058626.17	Capn11	chr17	protein_coding	calpain 11
chr17	45954725	45964109	-	45954798	45964109	A3SS	0.5	50	50	ENSMUST00000120717.8	ENSMUSG00000058626.17	Capn11	chr17	protein_coding	calpain 11
chr17	45988942	45990163	-	45988942;45989927	45989889;45990163	ES	0.5	50	50	ENSMUST00000113523.9	ENSMUSG00000036026.16	Tmem63b	chr17	protein_coding	transmembrane protein 63b
chr17	45990640	45997641	-	45990640	45997043	5pMXE	0.25	50	50	ENSMUST00000113523.9	ENSMUSG00000036026.16	Tmem63b	chr17	protein_coding	transmembrane protein 63b
chr17	45990640	45991514	-	45990640	45997043	A5SS	0.25	50	50	ENSMUST00000113523.9	ENSMUSG00000036026.16	Tmem63b	chr17	protein_coding	transmembrane protein 63b
chr17	45990640	45996842	-	45990640	45997043	A5SS	0.25	50	50	ENSMUST00000113523.9	ENSMUSG00000036026.16	Tmem63b	chr17	protein_coding	transmembrane protein 63b
chr17	45990640	45997641	-	45990640	45996842	5pMXE	0.25	50	50	ENSMUST00000145873.8	ENSMUSG00000036026.16	Tmem63b	chr17	protein_coding	transmembrane protein 63b
chr17	45990640;45991567	45991514;45996842	-	45990640	45996842	cassetteExon	0.5	100	100	ENSMUST00000145873.8	ENSMUSG00000036026.16	Tmem63b	chr17	protein_coding	transmembrane protein 63b
chr17	45990640;45997414	45997043;45997641	-	45990640	45997641	cassetteExon	0.5	100	100	ENSMUST00000156254.8	ENSMUSG00000036026.16	Tmem63b	chr17	protein_coding	transmembrane protein 63b
chr17	45990640	45991514	-	45990640	45997641	A5SS	0.25	50	50	ENSMUST00000156254.8	ENSMUSG00000036026.16	Tmem63b	chr17	protein_coding	transmembrane protein 63b
chr17	45990640	45996842	-	45990640	45991514	5pMXE	0.25	50	50	ENSMUST00000133741.8	ENSMUSG00000036026.16	Tmem63b	chr17	protein_coding	transmembrane protein 63b
chr17	45988942	45990163	-	45989927	45990163	3pMXE	0.5	50	50	ENSMUST00000143907.3	ENSMUSG00000036026.16	Tmem63b	chr17	protein_coding	transmembrane protein 63b
chr17	45990640	45997641	-	45997414	45997641	3pMXE	0.5	50	50	ENSMUST00000131089.2	ENSMUSG00000036026.16	Tmem63b	chr17	protein_coding	transmembrane protein 63b
chr17	46006498;46007882	46007645;46008974	+	46006498	46008974	cassetteExon	0.5	100	100	ENSMUST00000024734.8	ENSMUSG00000023939.8	Mrpl14	chr17	protein_coding	mitochondrial ribosomal protein L14
chr17	46067729	46087084	+	46060282	46087084	A5SS	0.33	50	50	ENSMUST00000180558.9	ENSMUSG00000097727.9	F630040K05Rik	chr17	lncRNA	RIKEN cDNA F630040K05 gene
chr17	46078233	46087084	+	46060282	46087084	A5SS	0.33	50	50	ENSMUST00000180558.9	ENSMUSG00000097727.9	F630040K05Rik	chr17	lncRNA	RIKEN cDNA F630040K05 gene
chr17	46087344	46090185	+	46087344	46097035	A3SS	0.5	50	50	ENSMUST00000180519.2	ENSMUSG00000097727.9	F630040K05Rik	chr17	lncRNA	RIKEN cDNA F630040K05 gene
chr17	46078233	46087084	+	46067729	46087084	A5SS	0.33	50	50	ENSMUST00000180519.2	ENSMUSG00000097727.9	F630040K05Rik	chr17	lncRNA	RIKEN cDNA F630040K05 gene
chr17	46329805;46332048	46331917;46334991	-	46329805	46334991	cassetteExon	0.5	100	100	ENSMUST00000024747.14	ENSMUSG00000023951.19	Vegfa	chr17	protein_coding	vascular endothelial growth factor A
chr17	46329805;46333274	46333203;46334991	-	46329805	46334991	cassetteExon	0.5	100	100	ENSMUST00000024747.14	ENSMUSG00000023951.19	Vegfa	chr17	protein_coding	vascular endothelial growth factor A
chr17	46329805;46333274	46333203;46334991	-	46329805;46332048	46331917;46334991	MXE	0.5	100	100	ENSMUST00000071648.12	ENSMUSG00000023951.19	Vegfa	chr17	protein_coding	vascular endothelial growth factor A
chr17	46332048;46333274	46333203;46334991	-	46332048	46334991	cassetteExon	0.5	100	100	ENSMUST00000071648.12	ENSMUSG00000023951.19	Vegfa	chr17	protein_coding	vascular endothelial growth factor A
chr17	46332048;46333274	46333221;46334991	-	46332048	46334991	cassetteExon	0.5	100	100	ENSMUST00000071648.12	ENSMUSG00000023951.19	Vegfa	chr17	protein_coding	vascular endothelial growth factor A
chr17	46329805	46333203	-	46329805;46332048	46331917;46333203	ES	0.5	50	50	ENSMUST00000142351.9	ENSMUSG00000023951.19	Vegfa	chr17	protein_coding	vascular endothelial growth factor A
chr17	46332048	46333221	-	46332048	46333203	A5SS	0.33	50	50	ENSMUST00000142351.9	ENSMUSG00000023951.19	Vegfa	chr17	protein_coding	vascular endothelial growth factor A
chr17	46329805	46333203	-	46329805	46331917	5pMXE	0.33	50	50	ENSMUST00000143985.2	ENSMUSG00000023951.19	Vegfa	chr17	protein_coding	vascular endothelial growth factor A
chr17	46329805	46334991	-	46329805	46331917	5pMXE	0.33	50	50	ENSMUST00000143985.2	ENSMUSG00000023951.19	Vegfa	chr17	protein_coding	vascular endothelial growth factor A
chr17	46433757	46435902	+	46433757	46436216	A3SS	0.5	50	50	ENSMUST00000024763.10	ENSMUSG00000023967.10	Mrps18a	chr17	protein_coding	mitochondrial ribosomal protein S18A
chr17	46440424	46445899	-	46433127	46445899	A3SS	0.5	50	50	ENSMUST00000148581.8	ENSMUSG00000023966.9	Rsph9	chr17	protein_coding	radial spoke head 9 homolog (Chlamydomonas)
chr17	46477576	46478268	+	46477576	46478149	A3SS	0.5	50	50	ENSMUST00000169383.8	ENSMUSG00000023952.14	Gtpbp2	chr17	protein_coding	GTP binding protein 2
chr17	46472252	46474409	+	46472217	46474409	A5SS	0.2	50	50	ENSMUST00000169383.8	ENSMUSG00000023952.14	Gtpbp2	chr17	protein_coding	GTP binding protein 2
chr17	46472252	46475120	+	46474435	46475120	A5SS&ES	0.5	50	50	ENSMUST00000169383.8	ENSMUSG00000023952.14	Gtpbp2	chr17	protein_coding	GTP binding protein 2
chr17	46474139	46474409	+	46472217	46474409	A5SS	0.2	50	50	ENSMUST00000169383.8	ENSMUSG00000023952.14	Gtpbp2	chr17	protein_coding	GTP binding protein 2
chr17	46474296	46474409	+	46472217	46474409	A5SS	0.2	50	50	ENSMUST00000169383.8	ENSMUSG00000023952.14	Gtpbp2	chr17	protein_coding	GTP binding protein 2
chr17	46474334	46474409	+	46472217	46474409	A5SS	0.2	50	50	ENSMUST00000169383.8	ENSMUSG00000023952.14	Gtpbp2	chr17	protein_coding	GTP binding protein 2
chr17	46472252	46475120	+	46472252;46474435	46474409;46475120	ES	0.5	50	50	ENSMUST00000024748.14	ENSMUSG00000023952.14	Gtpbp2	chr17	protein_coding	GTP binding protein 2
chr17	46472252;46474139	46473960;46474409	+	46472252	46474409	cassetteExon	0.5	100	100	ENSMUST00000024748.14	ENSMUSG00000023952.14	Gtpbp2	chr17	protein_coding	GTP binding protein 2
chr17	46472252;46474296	46473960;46474409	+	46472252	46474409	cassetteExon	0.5	100	100	ENSMUST00000024748.14	ENSMUSG00000023952.14	Gtpbp2	chr17	protein_coding	GTP binding protein 2
chr17	46472252;46474334	46473960;46474409	+	46472252	46474409	cassetteExon	0.5	100	100	ENSMUST00000024748.14	ENSMUSG00000023952.14	Gtpbp2	chr17	protein_coding	GTP binding protein 2
chr17	46472252;46474296	46474223;46474409	+	46472252	46474409	cassetteExon	0.5	100	100	ENSMUST00000024748.14	ENSMUSG00000023952.14	Gtpbp2	chr17	protein_coding	GTP binding protein 2
chr17	46472252;46474334	46474223;46474409	+	46472252	46474409	cassetteExon	0.5	100	100	ENSMUST00000024748.14	ENSMUSG00000023952.14	Gtpbp2	chr17	protein_coding	GTP binding protein 2
chr17	46472252	46472643	+	46472252	46474409	A3SS	0.2	50	50	ENSMUST00000024748.14	ENSMUSG00000023952.14	Gtpbp2	chr17	protein_coding	GTP binding protein 2
chr17	46472252;46474139	46473960;46474409	+	46472252;46474334	46474223;46474409	MXE	0.5	100	100	ENSMUST00000164338.2	ENSMUSG00000023952.14	Gtpbp2	chr17	protein_coding	GTP binding protein 2
chr17	46472252	46472643	+	46472252	46474223	A3SS	0.25	50	50	ENSMUST00000164338.2	ENSMUSG00000023952.14	Gtpbp2	chr17	protein_coding	GTP binding protein 2
chr17	46474296	46474409	+	46474334	46474409	A5SS	0.2	50	50	ENSMUST00000164338.2	ENSMUSG00000023952.14	Gtpbp2	chr17	protein_coding	GTP binding protein 2
chr17	46472252;46474435	46473960;46475120	+	46472252	46475120	cassetteExon	0.5	100	100	ENSMUST00000166563.2	ENSMUSG00000023952.14	Gtpbp2	chr17	protein_coding	GTP binding protein 2
chr17	46472252;46474435	46474223;46475120	+	46472252	46475120	cassetteExon	0.5	100	100	ENSMUST00000166563.2	ENSMUSG00000023952.14	Gtpbp2	chr17	protein_coding	GTP binding protein 2
chr17	46472252	46472643	+	46472252	46475120	A3SS	0.2	50	50	ENSMUST00000166563.2	ENSMUSG00000023952.14	Gtpbp2	chr17	protein_coding	GTP binding protein 2
chr17	46472252	46473960	+	46472252	46472643	3pMXE	0.2	50	50	ENSMUST00000165686.2	ENSMUSG00000023952.14	Gtpbp2	chr17	protein_coding	GTP binding protein 2
chr17	46472252;46474296	46474223;46474409	+	46472252;46474139	46473960;46474409	MXE	0.5	100	100	ENSMUST00000171901.8	ENSMUSG00000023952.14	Gtpbp2	chr17	protein_coding	GTP binding protein 2
chr17	46472252	46474409	+	46474296	46474409	5pMXE	0.2	50	50	ENSMUST00000169955.2	ENSMUSG00000023952.14	Gtpbp2	chr17	protein_coding	GTP binding protein 2
chr17	46474139	46474409	+	46474296	46474409	5pMXE	0.2	50	50	ENSMUST00000169955.2	ENSMUSG00000023952.14	Gtpbp2	chr17	protein_coding	GTP binding protein 2
chr17	46501702	46509560	-	46501702;46505342	46505128;46509560	ES	0.5	50	50	ENSMUST00000024749.9	ENSMUSG00000023953.10	Polh	chr17	protein_coding	polymerase (DNA directed), eta (RAD 30 related)
chr17	46547936	46549263	+	46547936	46549299	A3SS	0.5	50	50	ENSMUST00000087031.7	ENSMUSG00000067150.7	Xpo5	chr17	protein_coding	exportin 5
chr17	46556674	46558655	-	46556674;46557140	46557033;46558655	ES	0.5	50	50	ENSMUST00000087026.13	ENSMUSG00000067148.16	Polr1c	chr17	protein_coding	polymerase (RNA) I polypeptide C
chr17	46556722	46557033	-	46556674	46557033	A3SS	0.5	50	50	ENSMUST00000087026.13	ENSMUSG00000067148.16	Polr1c	chr17	protein_coding	polymerase (RNA) I polypeptide C
chr17	46556674	46557464	-	46556674	46557033	A5SS&ES	0.33	50	50	ENSMUST00000087026.13	ENSMUSG00000067148.16	Polr1c	chr17	protein_coding	polymerase (RNA) I polypeptide C
chr17	46556674	46558655	-	46556674	46557464	5pMXE	0.33	50	50	ENSMUST00000124655.8	ENSMUSG00000067148.16	Polr1c	chr17	protein_coding	polymerase (RNA) I polypeptide C
chr17	46556674	46558655	-	46557140	46558655	A3SS&ES	0.5	50	50	ENSMUST00000142706.9	ENSMUSG00000067148.16	Polr1c	chr17	protein_coding	polymerase (RNA) I polypeptide C
chr17	46562153	46562492	+	46562153;46562413	46562290;46562492	ES	0.5	50	50	ENSMUST00000095263.10	ENSMUSG00000071074.10	Yipf3	chr17	protein_coding	Yip1 domain family, member 3
chr17	46562153	46562492	+	46562153	46562290	3pMXE	0.5	50	50	ENSMUST00000123311.8	ENSMUSG00000071074.10	Yipf3	chr17	protein_coding	Yip1 domain family, member 3
chr17	46562153	46562492	+	46562413	46562492	A5SS	0.5	50	50	ENSMUST00000151488.2	ENSMUSG00000071074.10	Yipf3	chr17	protein_coding	Yip1 domain family, member 3
chr17	46565542	46566585	+	46565542;46566265	46566105;46566585	ES	0.5	50	50	ENSMUST00000233692.2	ENSMUSG00000071073.6	Lrrc73	chr17	protein_coding	leucine rich repeat containing 73
chr17	46567209	46567608	+	46567209	46567574	A3SS	0.5	50	50	ENSMUST00000233692.2	ENSMUSG00000071073.6	Lrrc73	chr17	protein_coding	leucine rich repeat containing 73
chr17	46571128;46571835	46571806;46572062	-	46571128	46572062	cassetteExon	0.5	100	100	ENSMUST00000180283.2	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46574736;46575116	46575020;46575809	-	46574736	46575809	cassetteExon	0.5	100	100	ENSMUST00000180283.2	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46575904;46582855	46582726;46593886	-	46575904	46593886	cassetteExon	0.5	100	100	ENSMUST00000180283.2	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46575904;46593365	46593272;46593886	-	46575904	46593886	cassetteExon	0.5	100	100	ENSMUST00000180283.2	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46574739	46575809	-	46574736	46575809	A3SS	0.33	50	50	ENSMUST00000180283.2	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46575904	46580654	-	46575904	46593886	A5SS	0.16	50	50	ENSMUST00000180283.2	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46575904	46581665	-	46575904	46593886	A5SS	0.16	50	50	ENSMUST00000180283.2	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46575904	46593578	-	46575904	46593886	A5SS	0.16	50	50	ENSMUST00000180283.2	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46575904;46582855	46582726;46593272	-	46575904	46593272	cassetteExon	0.5	100	100	ENSMUST00000012440.14	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46575904;46582855	46582726;46593886	-	46575904;46593365	46593272;46593886	MXE	0.5	100	100	ENSMUST00000012440.14	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46591470	46593272	-	46575904	46593272	A3SS	0.33	50	50	ENSMUST00000012440.14	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46575904	46580654	-	46575904	46593272	A5SS	0.16	50	50	ENSMUST00000012440.14	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46575904	46581665	-	46575904	46593272	A5SS	0.16	50	50	ENSMUST00000012440.14	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46575904	46593578	-	46575904	46593272	A5SS&ES	0.16	50	50	ENSMUST00000012440.14	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46593365	46593578	-	46593365	46593886	A5SS	0.5	50	50	ENSMUST00000012440.14	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46582855	46593886	-	46582855;46593365	46593272;46593886	ES	0.33	50	50	ENSMUST00000164342.10	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46574739;46575116	46575020;46575809	-	46574739	46575809	cassetteExon	0.5	100	100	ENSMUST00000164342.10	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46582855;46591470	46591342;46593272	-	46582855	46593272	cassetteExon	0.5	100	100	ENSMUST00000164342.10	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46575904	46580654	-	46575904	46582726	A5SS	0.16	50	50	ENSMUST00000164342.10	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46575904	46581665	-	46575904	46582726	A5SS	0.16	50	50	ENSMUST00000164342.10	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46575904	46593578	-	46575904	46582726	A5SS&ES	0.16	50	50	ENSMUST00000164342.10	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46582855	46582986	-	46582855	46593272	A5SS	0.25	50	50	ENSMUST00000164342.10	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46571128	46572062	-	46571835	46572062	3pMXE	0.5	50	50	ENSMUST00000224404.2	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46582855	46582986	-	46582855	46591342	A5SS	0.25	50	50	ENSMUST00000225359.2	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46575904;46593365	46593272;46593578	-	46575904	46593578	cassetteExon	0.5	100	100	ENSMUST00000225288.2	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46575904	46580654	-	46575904	46593578	A5SS	0.16	50	50	ENSMUST00000225288.2	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46575904	46581665	-	46575904	46593578	A5SS	0.16	50	50	ENSMUST00000225288.2	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46575904	46580654	-	46575904	46581665	A5SS	0.16	50	50	ENSMUST00000224055.2	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46575904	46593886	-	46575904	46593272	5pMXE	0.16	50	50	ENSMUST00000224230.2	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46582855	46593886	-	46582855	46582986	5pMXE	0.25	50	50	ENSMUST00000224901.2	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46574739	46575020	-	46574736	46575020	A3SS	0.5	50	50	ENSMUST00000224901.2	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46574739	46575809	-	46575116	46575809	A3SS&ES	0.33	50	50	ENSMUST00000224901.2	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46574736	46575809	-	46575116	46575809	A3SS&ES	0.33	50	50	ENSMUST00000224090.2	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46575904	46593886	-	46582855	46593886	3pMXE	0.33	50	50	ENSMUST00000225741.2	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46582855	46591342	-	46582855	46593886	A5SS	0.25	50	50	ENSMUST00000225741.2	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46575904	46593578	-	46593365	46593578	3pMXE	0.5	50	50	ENSMUST00000224445.2	ENSMUSG00000012296.17	Tjap1	chr17	protein_coding	tight junction associated protein 1
chr17	46608446	46609494	+	46608446	46609439	A3SS	0.5	50	50	ENSMUST00000188223.7	ENSMUSG00000047428.15	Dlk2	chr17	protein_coding	delta like non-canonical Notch ligand 2
chr17	46612635	46613292	+	46612714	46613292	A5SS	0.5	50	50	ENSMUST00000061722.13	ENSMUSG00000047428.15	Dlk2	chr17	protein_coding	delta like non-canonical Notch ligand 2
chr17	46609004	46609494	+	46608446	46609494	A5SS	0.5	50	50	ENSMUST00000166280.8	ENSMUSG00000047428.15	Dlk2	chr17	protein_coding	delta like non-canonical Notch ligand 2
chr17	46635840	46639054	-	46635840	46638698	5pMXE	0.5	50	50	ENSMUST00000167360.8	ENSMUSG00000032842.14	Abcc10	chr17	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 10
chr17	46614909	46621303	-	46621159	46621303	A3SS&ES	0.5	50	50	ENSMUST00000167360.8	ENSMUSG00000032842.14	Abcc10	chr17	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 10
chr17	46624977	46625142	-	46624746	46625142	A3SS	0.5	50	50	ENSMUST00000167360.8	ENSMUSG00000032842.14	Abcc10	chr17	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 10
chr17	46633219	46634278	-	46627562	46634278	A3SS	0.5	50	50	ENSMUST00000168490.2	ENSMUSG00000032842.14	Abcc10	chr17	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 10
chr17	46627562	46632479	-	46627562	46634278	A5SS	0.5	50	50	ENSMUST00000168490.2	ENSMUSG00000032842.14	Abcc10	chr17	protein_coding	ATP-binding cassette, sub-family C (CFTR/MRP), member 10
chr17	46713759	46716664	+	46713759	46716709	A3SS	0.5	50	50	ENSMUST00000113481.9	ENSMUSG00000015597.18	Zfp318	chr17	protein_coding	zinc finger protein 318
chr17	46716770	46719945	+	46717010	46719945	A5SS	0.5	50	50	ENSMUST00000113481.9	ENSMUSG00000015597.18	Zfp318	chr17	protein_coding	zinc finger protein 318
chr17	46720145	46720606	+	46720145	46731341	A3SS	0.5	50	50	ENSMUST00000138127.8	ENSMUSG00000015597.18	Zfp318	chr17	protein_coding	zinc finger protein 318
chr17	46741018	46741347	+	46741018	46741708	A3SS	0.5	50	50	ENSMUST00000113465.10	ENSMUSG00000023968.16	Crip3	chr17	protein_coding	cysteine-rich protein 3
chr17	46741779	46741940	+	46741779	46741915	A3SS	0.5	50	50	ENSMUST00000113465.10	ENSMUSG00000023968.16	Crip3	chr17	protein_coding	cysteine-rich protein 3
chr17	46742159	46742305	+	46742218	46742305	A5SS	0.5	50	50	ENSMUST00000113465.10	ENSMUSG00000023968.16	Crip3	chr17	protein_coding	cysteine-rich protein 3
chr17	46740339;46741018	46740735;46741708	+	46740339	46741708	cassetteExon	0.5	100	100	ENSMUST00000164180.8	ENSMUSG00000023968.16	Crip3	chr17	protein_coding	cysteine-rich protein 3
chr17	46748352	46748444	-	46748352	46748923	A5SS	0.5	50	50	ENSMUST00000087012.7	ENSMUSG00000067144.8	Slc22a7	chr17	protein_coding	solute carrier family 22 (organic anion transporter), member 7
chr17	46791174;46794733	46794495;46795076	-	46791174	46795076	cassetteExon	0.5	100	100	ENSMUST00000047034.9	ENSMUSG00000015599.10	Ttbk1	chr17	protein_coding	tau tubulin kinase 1
chr17	46771958	46778052	-	46758643	46778052	A3SS	0.5	50	50	ENSMUST00000047034.9	ENSMUSG00000015599.10	Ttbk1	chr17	protein_coding	tau tubulin kinase 1
chr17	46830857	46831408	-	46830857;46831166	46830938;46831408	ES	0.5	50	50	ENSMUST00000182485.8	ENSMUSG00000040327.17	Cul9	chr17	protein_coding	cullin 9
chr17	46841082	46849151	-	46841082;46848741	46848549;46849151	ES	0.5	50	50	ENSMUST00000182485.8	ENSMUSG00000040327.17	Cul9	chr17	protein_coding	cullin 9
chr17	46813712	46814015	-	46813613	46814015	A3SS	0.5	50	50	ENSMUST00000182485.8	ENSMUSG00000040327.17	Cul9	chr17	protein_coding	cullin 9
chr17	46854709	46856637	-	46854709	46857172	A5SS	0.5	50	50	ENSMUST00000182485.8	ENSMUSG00000040327.17	Cul9	chr17	protein_coding	cullin 9
chr17	46813421	46813539	-	46813421	46813614	A5SS	0.5	50	50	ENSMUST00000182315.8	ENSMUSG00000040327.17	Cul9	chr17	protein_coding	cullin 9
chr17	46841082	46849151	-	46841082	46848549	5pMXE	0.5	50	50	ENSMUST00000182451.2	ENSMUSG00000040327.17	Cul9	chr17	protein_coding	cullin 9
chr17	46860438	46861827	-	46860438;46860962	46860771;46861827	ES	0.5	50	50	ENSMUST00000015749.7	ENSMUSG00000015605.7	Srf	chr17	protein_coding	serum response factor
chr17	46860438	46861827	-	46860438	46860771	5pMXE	0.5	50	50	ENSMUST00000233767.2	ENSMUSG00000015605.7	Srf	chr17	protein_coding	serum response factor
chr17	46879002	46882529	-	46879955	46882529	A3SS	0.5	50	50	ENSMUST00000232855.2	ENSMUSG00000023972.11	Ptk7	chr17	protein_coding	PTK7 protein tyrosine kinase 7
chr17	46955438	46956007	-	46955438	46956901	A5SS	0.5	50	50	ENSMUST00000233974.2	ENSMUSG00000003546.11	Klc4	chr17	protein_coding	kinesin light chain 4
chr17	46957324	46958322	+	46957324	46958316	A3SS	0.5	50	50	ENSMUST00000002844.14	ENSMUSG00000002767.14	Mrpl2	chr17	protein_coding	mitochondrial ribosomal protein L2
chr17	46959513	46959596	+	46959513	46959585	A3SS	0.5	50	50	ENSMUST00000002844.14	ENSMUSG00000002767.14	Mrpl2	chr17	protein_coding	mitochondrial ribosomal protein L2
chr17	46965585	46966590	+	46965585	46966441	A3SS	0.5	50	50	ENSMUST00000043464.14	ENSMUSG00000038545.14	Cul7	chr17	protein_coding	cullin 7
chr17	46968729;46969343	46968854;46969534	+	46968729	46969534	cassetteExon	0.5	100	100	ENSMUST00000133393.8	ENSMUSG00000038545.14	Cul7	chr17	protein_coding	cullin 7
chr17	46981111	46983451	-	46981111;46983366	46983262;46983451	ES	0.5	50	50	ENSMUST00000233155.2	ENSMUSG00000023971.10	Rrp36	chr17	protein_coding	ribosomal RNA processing 36
chr17	46981111;46983773	46983451;46985123	-	46981111	46985123	cassetteExon	0.5	100	100	ENSMUST00000233247.2	ENSMUSG00000023971.10	Rrp36	chr17	protein_coding	ribosomal RNA processing 36
chr17	46981111	46983262	-	46981111	46985123	A5SS	0.33	50	50	ENSMUST00000233247.2	ENSMUSG00000023971.10	Rrp36	chr17	protein_coding	ribosomal RNA processing 36
chr17	46989034	46989968	-	46989034;46989419	46989207;46989968	ES	0.5	50	50	ENSMUST00000071841.7	ENSMUSG00000063576.13	Klhdc3	chr17	protein_coding	kelch domain containing 3
chr17	46989419	46991628	-	46989419;46990120	46989968;46991628	ES	0.5	50	50	ENSMUST00000071841.7	ENSMUSG00000063576.13	Klhdc3	chr17	protein_coding	kelch domain containing 3
chr17	46987147	46987242	-	46986078	46987242	A3SS	0.5	50	50	ENSMUST00000071841.7	ENSMUSG00000063576.13	Klhdc3	chr17	protein_coding	kelch domain containing 3
chr17	46990120	46991268	-	46990120	46991628	A5SS	0.5	50	50	ENSMUST00000071841.7	ENSMUSG00000063576.13	Klhdc3	chr17	protein_coding	kelch domain containing 3
chr17	46989034;46990120	46989968;46991628	-	46989034;46989419	46989207;46991628	MXE	0.5	100	100	ENSMUST00000165007.9	ENSMUSG00000063576.13	Klhdc3	chr17	protein_coding	kelch domain containing 3
chr17	46991428	46992543	+	46990134	46992543	A5SS	0.12	50	50	ENSMUST00000233032.2	ENSMUSG00000002768.9	Mea1	chr17	protein_coding	male enhanced antigen 1
chr17	46991774	46992543	+	46990134	46992543	A5SS	0.12	50	50	ENSMUST00000233032.2	ENSMUSG00000002768.9	Mea1	chr17	protein_coding	male enhanced antigen 1
chr17	46991916	46992543	+	46990134	46992543	A5SS	0.12	50	50	ENSMUST00000233032.2	ENSMUSG00000002768.9	Mea1	chr17	protein_coding	male enhanced antigen 1
chr17	46992059	46992543	+	46990134	46992543	A5SS	0.12	50	50	ENSMUST00000233032.2	ENSMUSG00000002768.9	Mea1	chr17	protein_coding	male enhanced antigen 1
chr17	46992088	46992543	+	46990134	46992543	A5SS	0.12	50	50	ENSMUST00000233032.2	ENSMUSG00000002768.9	Mea1	chr17	protein_coding	male enhanced antigen 1
chr17	46992131	46992543	+	46990134	46992543	A5SS	0.12	50	50	ENSMUST00000233032.2	ENSMUSG00000002768.9	Mea1	chr17	protein_coding	male enhanced antigen 1
chr17	46992198	46992543	+	46990134	46992543	A5SS	0.12	50	50	ENSMUST00000233032.2	ENSMUSG00000002768.9	Mea1	chr17	protein_coding	male enhanced antigen 1
chr17	46991774	46992543	+	46991428	46992543	A5SS	0.12	50	50	ENSMUST00000232732.2	ENSMUSG00000002768.9	Mea1	chr17	protein_coding	male enhanced antigen 1
chr17	46991916	46992543	+	46991428	46992543	A5SS	0.12	50	50	ENSMUST00000232732.2	ENSMUSG00000002768.9	Mea1	chr17	protein_coding	male enhanced antigen 1
chr17	46992059	46992543	+	46991428	46992543	A5SS	0.12	50	50	ENSMUST00000232732.2	ENSMUSG00000002768.9	Mea1	chr17	protein_coding	male enhanced antigen 1
chr17	46992088	46992543	+	46991428	46992543	A5SS	0.12	50	50	ENSMUST00000232732.2	ENSMUSG00000002768.9	Mea1	chr17	protein_coding	male enhanced antigen 1
chr17	46992131	46992543	+	46991428	46992543	A5SS	0.12	50	50	ENSMUST00000232732.2	ENSMUSG00000002768.9	Mea1	chr17	protein_coding	male enhanced antigen 1
chr17	46992198	46992543	+	46991428	46992543	A5SS	0.12	50	50	ENSMUST00000232732.2	ENSMUSG00000002768.9	Mea1	chr17	protein_coding	male enhanced antigen 1
chr17	46991774	46992543	+	46991916	46992543	A5SS	0.12	50	50	ENSMUST00000233644.2	ENSMUSG00000002768.9	Mea1	chr17	protein_coding	male enhanced antigen 1
chr17	46992059	46992543	+	46991916	46992543	A5SS	0.12	50	50	ENSMUST00000233644.2	ENSMUSG00000002768.9	Mea1	chr17	protein_coding	male enhanced antigen 1
chr17	46992088	46992543	+	46991916	46992543	A5SS	0.12	50	50	ENSMUST00000233644.2	ENSMUSG00000002768.9	Mea1	chr17	protein_coding	male enhanced antigen 1
chr17	46992131	46992543	+	46991916	46992543	A5SS	0.12	50	50	ENSMUST00000233644.2	ENSMUSG00000002768.9	Mea1	chr17	protein_coding	male enhanced antigen 1
chr17	46992198	46992543	+	46991916	46992543	A5SS	0.12	50	50	ENSMUST00000233644.2	ENSMUSG00000002768.9	Mea1	chr17	protein_coding	male enhanced antigen 1
chr17	46992059	46992543	+	46991774	46992543	A5SS	0.12	50	50	ENSMUST00000232762.2	ENSMUSG00000002768.9	Mea1	chr17	protein_coding	male enhanced antigen 1
chr17	46992088	46992543	+	46991774	46992543	A5SS	0.12	50	50	ENSMUST00000232762.2	ENSMUSG00000002768.9	Mea1	chr17	protein_coding	male enhanced antigen 1
chr17	46992131	46992543	+	46991774	46992543	A5SS	0.12	50	50	ENSMUST00000232762.2	ENSMUSG00000002768.9	Mea1	chr17	protein_coding	male enhanced antigen 1
chr17	46992198	46992543	+	46991774	46992543	A5SS	0.12	50	50	ENSMUST00000232762.2	ENSMUSG00000002768.9	Mea1	chr17	protein_coding	male enhanced antigen 1
chr17	46992059	46992543	+	46992088	46992543	A5SS	0.12	50	50	ENSMUST00000233430.2	ENSMUSG00000002768.9	Mea1	chr17	protein_coding	male enhanced antigen 1
chr17	46992131	46992543	+	46992088	46992543	A5SS	0.12	50	50	ENSMUST00000233430.2	ENSMUSG00000002768.9	Mea1	chr17	protein_coding	male enhanced antigen 1
chr17	46992198	46992543	+	46992088	46992543	A5SS	0.12	50	50	ENSMUST00000233430.2	ENSMUSG00000002768.9	Mea1	chr17	protein_coding	male enhanced antigen 1
chr17	46992131	46992543	+	46992059	46992543	A5SS	0.12	50	50	ENSMUST00000233491.2	ENSMUSG00000002768.9	Mea1	chr17	protein_coding	male enhanced antigen 1
chr17	46992198	46992543	+	46992059	46992543	A5SS	0.12	50	50	ENSMUST00000233491.2	ENSMUSG00000002768.9	Mea1	chr17	protein_coding	male enhanced antigen 1
chr17	46992198	46992543	+	46992131	46992543	A5SS	0.12	50	50	ENSMUST00000002845.8	ENSMUSG00000002768.9	Mea1	chr17	protein_coding	male enhanced antigen 1
chr17	47011075	47015759	-	47011072	47015759	A3SS	0.5	50	50	ENSMUST00000002839.9	ENSMUSG00000059409.10	Ppp2r5d	chr17	protein_coding	protein phosphatase 2, regulatory subunit B', delta
chr17	47025470	47026288	+	47025470	47031254	A3SS	0.5	50	50	ENSMUST00000002840.9	ENSMUSG00000002763.17	Pex6	chr17	protein_coding	peroxisomal biogenesis factor 6
chr17	47037234	47037532	-	47037337	47037532	A3SS	0.5	50	50	ENSMUST00000147112.2	ENSMUSG00000002769.10	Gnmt	chr17	protein_coding	glycine N-methyltransferase
chr17	47058126	47058347	-	47054208	47058347	A3SS	0.5	50	50	ENSMUST00000059844.13	ENSMUSG00000023973.14	Cnpy3	chr17	protein_coding	canopy FGF signaling regulator 3
chr17	47058470	47062899	-	47048775	47062899	A3SS	0.5	50	50	ENSMUST00000129200.2	ENSMUSG00000023973.14	Cnpy3	chr17	protein_coding	canopy FGF signaling regulator 3
chr17	47048775	47054112	-	47048775	47062899	A5SS	0.5	50	50	ENSMUST00000129200.2	ENSMUSG00000023973.14	Cnpy3	chr17	protein_coding	canopy FGF signaling regulator 3
chr17	47091477	47093545	-	47091477;47092817	47092709;47093545	ES	0.5	50	50	ENSMUST00000078286.6	ENSMUSG00000063888.8	Rpl7l1	chr17	protein_coding	ribosomal protein L7-like 1
chr17	47141922	47169362	-	47141922	47143182	5pMXE	0.5	50	50	ENSMUST00000233537.2	ENSMUSG00000036568.8	Bicral	chr17	protein_coding	BRD4 interacting chromatin remodeling complex associated protein like
chr17	47274716	47277067	-	47274716;47275735	47275683;47277067	ES	0.5	50	50	ENSMUST00000113337.10	ENSMUSG00000023977.16	Ubr2	chr17	protein_coding	ubiquitin protein ligase E3 component n-recognin 2
chr17	47287016;47291344	47291246;47292280	-	47287016;47291513	47291415;47292280	MXE	0.5	100	100	ENSMUST00000113337.10	ENSMUSG00000023977.16	Ubr2	chr17	protein_coding	ubiquitin protein ligase E3 component n-recognin 2
chr17	47299822	47301918	-	47299709	47301918	A3SS	0.5	50	50	ENSMUST00000113337.10	ENSMUSG00000023977.16	Ubr2	chr17	protein_coding	ubiquitin protein ligase E3 component n-recognin 2
chr17	47243480	47243774	-	47243480	47245001	A5SS	0.5	50	50	ENSMUST00000113337.10	ENSMUSG00000023977.16	Ubr2	chr17	protein_coding	ubiquitin protein ligase E3 component n-recognin 2
chr17	47287016	47291415	-	47287016	47291246	A5SS	0.5	50	50	ENSMUST00000224759.2	ENSMUSG00000023977.16	Ubr2	chr17	protein_coding	ubiquitin protein ligase E3 component n-recognin 2
chr17	47451891;47452110	47452058;47452750	+	47451891	47452750	cassetteExon	0.5	100	100	ENSMUST00000188947.7	ENSMUSG00000064043.16	Trerf1	chr17	protein_coding	transcriptional regulating factor 1
chr17	47451891;47452330	47452058;47452750	+	47451891	47452750	cassetteExon	0.5	100	100	ENSMUST00000188947.7	ENSMUSG00000064043.16	Trerf1	chr17	protein_coding	transcriptional regulating factor 1
chr17	47628847;47630544	47630278;47634204	+	47628847	47634204	cassetteExon	0.5	100	100	ENSMUST00000188947.7	ENSMUSG00000064043.16	Trerf1	chr17	protein_coding	transcriptional regulating factor 1
chr17	47628847;47630604	47630278;47634204	+	47628847	47634204	cassetteExon	0.5	100	100	ENSMUST00000188947.7	ENSMUSG00000064043.16	Trerf1	chr17	protein_coding	transcriptional regulating factor 1
chr17	47627586	47628697	+	47627586	47628694	A3SS	0.5	50	50	ENSMUST00000188947.7	ENSMUSG00000064043.16	Trerf1	chr17	protein_coding	transcriptional regulating factor 1
chr17	47523615	47541156	+	47452835	47541156	A5SS	0.5	50	50	ENSMUST00000188947.7	ENSMUSG00000064043.16	Trerf1	chr17	protein_coding	transcriptional regulating factor 1
chr17	47605112	47624719	+	47597782	47624719	A5SS	0.5	50	50	ENSMUST00000188947.7	ENSMUSG00000064043.16	Trerf1	chr17	protein_coding	transcriptional regulating factor 1
chr17	47659782	47664623	+	47659782	47664659	A3SS	0.5	50	50	ENSMUST00000190080.9	ENSMUSG00000064043.16	Trerf1	chr17	protein_coding	transcriptional regulating factor 1
chr17	47452330	47452750	+	47452110	47452750	A5SS	0.33	50	50	ENSMUST00000190080.9	ENSMUSG00000064043.16	Trerf1	chr17	protein_coding	transcriptional regulating factor 1
chr17	47630544	47634204	+	47630604	47634204	A5SS	0.33	50	50	ENSMUST00000190080.9	ENSMUSG00000064043.16	Trerf1	chr17	protein_coding	transcriptional regulating factor 1
chr17	47451891	47452750	+	47452330	47452750	5pMXE	0.33	50	50	ENSMUST00000191153.7	ENSMUSG00000064043.16	Trerf1	chr17	protein_coding	transcriptional regulating factor 1
chr17	47683416	47685898	+	47683416;47683570	47683501;47685898	ES	0.5	50	50	ENSMUST00000120737.8	ENSMUSG00000034729.17	Mrps10	chr17	protein_coding	mitochondrial ribosomal protein S10
chr17	47679879;47681295	47680954;47683352	+	47679879	47683352	cassetteExon	0.5	100	100	ENSMUST00000120737.8	ENSMUSG00000034729.17	Mrps10	chr17	protein_coding	mitochondrial ribosomal protein S10
chr17	47683416	47683498	+	47683416	47683501	A3SS	0.33	50	50	ENSMUST00000120737.8	ENSMUSG00000034729.17	Mrps10	chr17	protein_coding	mitochondrial ribosomal protein S10
chr17	47680282	47683352	+	47679879	47683352	A5SS	0.25	50	50	ENSMUST00000120737.8	ENSMUSG00000034729.17	Mrps10	chr17	protein_coding	mitochondrial ribosomal protein S10
chr17	47682670	47683352	+	47679879	47683352	A5SS	0.25	50	50	ENSMUST00000120737.8	ENSMUSG00000034729.17	Mrps10	chr17	protein_coding	mitochondrial ribosomal protein S10
chr17	47683416	47685898	+	47683416;47683570	47683498;47685898	ES	0.5	50	50	ENSMUST00000119945.8	ENSMUSG00000034729.17	Mrps10	chr17	protein_coding	mitochondrial ribosomal protein S10
chr17	47683416	47685898	+	47683416	47683501	A3SS	0.33	50	50	ENSMUST00000135418.8	ENSMUSG00000034729.17	Mrps10	chr17	protein_coding	mitochondrial ribosomal protein S10
chr17	47679879	47683352	+	47681295	47683352	A5SS	0.25	50	50	ENSMUST00000135418.8	ENSMUSG00000034729.17	Mrps10	chr17	protein_coding	mitochondrial ribosomal protein S10
chr17	47680282	47683352	+	47681295	47683352	A5SS	0.25	50	50	ENSMUST00000135418.8	ENSMUSG00000034729.17	Mrps10	chr17	protein_coding	mitochondrial ribosomal protein S10
chr17	47682670	47683352	+	47681295	47683352	A5SS	0.25	50	50	ENSMUST00000135418.8	ENSMUSG00000034729.17	Mrps10	chr17	protein_coding	mitochondrial ribosomal protein S10
chr17	47683416	47685898	+	47683570	47685898	A5SS	0.5	50	50	ENSMUST00000136061.8	ENSMUSG00000034729.17	Mrps10	chr17	protein_coding	mitochondrial ribosomal protein S10
chr17	47682670	47683352	+	47680282	47683352	A5SS	0.25	50	50	ENSMUST00000060752.13	ENSMUSG00000034729.17	Mrps10	chr17	protein_coding	mitochondrial ribosomal protein S10
chr17	47724819	47744261	-	47724819	47732712	5pMXE	0.33	50	50	ENSMUST00000238764.2	ENSMUSG00000118471.2	Gm50461	chr17	protein_coding	predicted gene, 50461
chr17	47724819	47725458	-	47724819	47732712	A5SS	0.33	50	50	ENSMUST00000238764.2	ENSMUSG00000118471.2	Gm50461	chr17	protein_coding	predicted gene, 50461
chr17	47724819	47725458	-	47724819	47744261	A5SS	0.33	50	50	ENSMUST00000061885.9	ENSMUSG00000047150.9	1700001C19Rik	chr17	protein_coding	RIKEN cDNA 1700001C19 gene
chr17	47747719	47748191	-	47747719	47748116	A5SS	0.5	50	50	ENSMUST00000061885.9	ENSMUSG00000047150.9	1700001C19Rik	chr17	protein_coding	RIKEN cDNA 1700001C19 gene
chr17	47801207	47804487	-	47794759	47804487	A3SS	0.5	50	50	ENSMUST00000233174.2	ENSMUSG00000023980.8	Taf8	chr17	protein_coding	TATA-box binding protein associated factor 8
chr17	47904777	47908345	+	47904777;47905874	47905659;47908345	ES	0.16	50	50	ENSMUST00000182129.8	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47908504	47909679	+	47908504	47908928	3pMXE	0.5	50	50	ENSMUST00000182129.8	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47816191;47883219	47883045;47889634	+	47816191	47889634	cassetteExon	0.5	100	100	ENSMUST00000182129.8	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47816191;47886958	47886831;47889634	+	47816191	47889634	cassetteExon	0.5	100	100	ENSMUST00000182129.8	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47889717	47904534	+	47889717	47904570	A3SS	0.33	50	50	ENSMUST00000182129.8	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47889717	47904579	+	47889717	47904570	A3SS	0.33	50	50	ENSMUST00000182129.8	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47816211	47889634	+	47816191	47889634	A5SS	0.25	50	50	ENSMUST00000182129.8	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47889698	47904570	+	47889717	47904570	A5SS	0.5	50	50	ENSMUST00000182129.8	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47889698	47908345	+	47905874	47908345	A5SS&ES	0.16	50	50	ENSMUST00000182129.8	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47905330	47905659	+	47904777	47905659	A5SS	0.5	50	50	ENSMUST00000182129.8	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47907140	47908345	+	47905874	47908345	A5SS	0.16	50	50	ENSMUST00000182129.8	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47907407	47908345	+	47905874	47908345	A5SS	0.16	50	50	ENSMUST00000182129.8	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47908161	47908345	+	47905874	47908345	A5SS	0.16	50	50	ENSMUST00000182129.8	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47889698	47904570	+	47889698	47904534	A3SS	0.25	50	50	ENSMUST00000171031.8	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47889698	47904579	+	47889698	47904534	A3SS	0.25	50	50	ENSMUST00000171031.8	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47889717	47904534	+	47889698	47904534	A5SS	0.5	50	50	ENSMUST00000171031.8	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47889698;47904777	47904534;47908345	+	47889698	47908345	cassetteExon	0.5	100	100	ENSMUST00000183210.2	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47889698;47904777	47904570;47908345	+	47889698	47908345	cassetteExon	0.5	100	100	ENSMUST00000183210.2	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47889698;47904777	47904579;47908345	+	47889698	47908345	cassetteExon	0.5	100	100	ENSMUST00000183210.2	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47907140	47908345	+	47889698	47908345	A5SS	0.16	50	50	ENSMUST00000183210.2	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47907407	47908345	+	47889698	47908345	A5SS	0.16	50	50	ENSMUST00000183210.2	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47908161	47908345	+	47889698	47908345	A5SS	0.16	50	50	ENSMUST00000183210.2	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47889717	47904579	+	47889717	47904534	A3SS	0.33	50	50	ENSMUST00000183044.8	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47889698	47904570	+	47889698	47904579	A3SS	0.25	50	50	ENSMUST00000037333.17	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47889717	47904579	+	47889698	47904579	A5SS	0.5	50	50	ENSMUST00000037333.17	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47883219	47889634	+	47816211	47889634	A5SS	0.25	50	50	ENSMUST00000183177.8	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47886958	47889634	+	47816211	47889634	A5SS	0.25	50	50	ENSMUST00000183177.8	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47816191;47883219	47883045;47889634	+	47816191;47886958	47886831;47889634	MXE	0.5	100	100	ENSMUST00000182060.2	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47889698	47908345	+	47889698	47904534	3pMXE	0.25	50	50	ENSMUST00000182935.8	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47904777	47908345	+	47904777	47905659	A3SS	0.5	50	50	ENSMUST00000182281.2	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47889698	47908345	+	47904777	47908345	5pMXE	0.16	50	50	ENSMUST00000182874.3	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47907140	47908345	+	47904777	47908345	A5SS	0.16	50	50	ENSMUST00000182874.3	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47907407	47908345	+	47904777	47908345	A5SS	0.16	50	50	ENSMUST00000182874.3	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47908161	47908345	+	47904777	47908345	A5SS	0.16	50	50	ENSMUST00000182874.3	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47904777	47908345	+	47905874	47908345	5pMXE	0.16	50	50	ENSMUST00000182846.3	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47907407	47908345	+	47907140	47908345	A5SS	0.16	50	50	ENSMUST00000182539.8	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47908161	47908345	+	47907140	47908345	A5SS	0.16	50	50	ENSMUST00000182539.8	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47908161	47908345	+	47907407	47908345	A5SS	0.16	50	50	ENSMUST00000183256.8	ENSMUSG00000034165.17	Ccnd3	chr17	protein_coding	cyclin D3
chr17	47929987	47960875	+	47929987	47933810	3pMXE	0.33	50	50	ENSMUST00000024778.3	ENSMUSG00000092558.4	Med20	chr17	protein_coding	mediator complex subunit 20
chr17	47929987	47982969	+	47929987	47933810	3pMXE	0.33	50	50	ENSMUST00000024778.3	ENSMUSG00000092558.4	Med20	chr17	protein_coding	mediator complex subunit 20
chr17	47924042	47960875	+	47924042	47929734	3pMXE	0.5	50	50	ENSMUST00000149893.2	ENSMUSG00000092558.4	Med20	chr17	protein_coding	mediator complex subunit 20
chr17	47924042;47929987	47929734;47960875	+	47924042	47960875	cassetteExon	0.5	100	100	ENSMUST00000146105.8	ENSMUSG00000023984.18	Gm20517	chr17	protein_coding	predicted gene 20517
chr17	47941840	47960875	+	47924042	47960875	A5SS	0.33	50	50	ENSMUST00000146105.8	ENSMUSG00000023984.18	Gm20517	chr17	protein_coding	predicted gene 20517
chr17	47929987	47982969	+	47929987	47960875	3pMXE	0.33	50	50	ENSMUST00000130830.2	ENSMUSG00000023984.18	Gm20517	chr17	protein_coding	predicted gene 20517
chr17	47941840	47960875	+	47929987	47960875	A5SS	0.33	50	50	ENSMUST00000130830.2	ENSMUSG00000023984.18	Gm20517	chr17	protein_coding	predicted gene 20517
chr17	47984343	47989769	+	47984343;47985845	47985641;47989769	ES	0.5	50	50	ENSMUST00000132397.2	ENSMUSG00000023984.18	Gm20517	chr17	protein_coding	predicted gene 20517
chr17	47924042;47960948	47960875;47982969	+	47924042;47929987	47929734;47982969	MXE	0.5	100	100	ENSMUST00000132397.2	ENSMUSG00000023984.18	Gm20517	chr17	protein_coding	predicted gene 20517
chr17	47929987;47960948	47960875;47982969	+	47929987	47982969	cassetteExon	0.5	100	100	ENSMUST00000132397.2	ENSMUSG00000023984.18	Gm20517	chr17	protein_coding	predicted gene 20517
chr17	47990643	47991607	+	47990794	47991607	A5SS	0.5	50	50	ENSMUST00000132397.2	ENSMUSG00000023984.18	Gm20517	chr17	protein_coding	predicted gene 20517
chr17	47929987	47982969	+	47960948	47982969	5pMXE	0.5	50	50	ENSMUST00000145314.2	ENSMUSG00000090115.8	Usp49	chr17	protein_coding	ubiquitin specific peptidase 49
chr17	47997987	47998113	-	47997933	47998113	A3SS	0.5	50	50	ENSMUST00000113302.10	ENSMUSG00000033475.16	Tomm6	chr17	protein_coding	translocase of outer mitochondrial membrane 6
chr17	48003404	48005436	-	48003404	48004772	5pMXE	0.5	50	50	ENSMUST00000143789.5	ENSMUSG00000079444.10	Gm21981	chr17	protein_coding	predicted gene 21981
chr17	48000799	48000983	-	48000411	48000983	A3SS	0.5	50	50	ENSMUST00000143789.5	ENSMUSG00000079444.10	Gm21981	chr17	protein_coding	predicted gene 21981
chr17	48008258	48008419	+	48008258	48009498	A3SS	0.5	50	50	ENSMUST00000156118.8	ENSMUSG00000023266.12	Frs3	chr17	protein_coding	fibroblast growth factor receptor substrate 3
chr17	48006197	48008116	+	48000023	48008116	A5SS	0.5	50	50	ENSMUST00000156118.8	ENSMUSG00000023266.12	Frs3	chr17	protein_coding	fibroblast growth factor receptor substrate 3
chr17	48010620	48011230	+	48010620	48012548	A3SS	0.5	50	50	ENSMUST00000113296.8	ENSMUSG00000023266.12	Frs3	chr17	protein_coding	fibroblast growth factor receptor substrate 3
chr17	48013156	48013495	+	48012709	48013495	A5SS	0.5	50	50	ENSMUST00000113296.8	ENSMUSG00000023266.12	Frs3	chr17	protein_coding	fibroblast growth factor receptor substrate 3
chr17	48011453	48011670	-	48011367	48011670	A3SS	0.5	50	50	ENSMUST00000136531.2	ENSMUSG00000086930.2	Frs3os	chr17	lncRNA	fibroblast growth factor receptor substrate 3, opposite strand
chr17	48011757	48012539	-	48011792	48012539	A3SS	0.5	50	50	ENSMUST00000136531.2	ENSMUSG00000086930.2	Frs3os	chr17	lncRNA	fibroblast growth factor receptor substrate 3, opposite strand
chr17	48039826	48040177	+	48039826	48041524	A3SS	0.5	50	50	ENSMUST00000144955.2	ENSMUSG00000023987.15	Pgc	chr17	protein_coding	progastricsin (pepsinogen C)
chr17	48041137	48041524	+	48039826	48041524	A5SS	0.5	50	50	ENSMUST00000144955.2	ENSMUSG00000023987.15	Pgc	chr17	protein_coding	progastricsin (pepsinogen C)
chr17	48097121	48097856	+	48097121;48097457	48097203;48097856	ES	0.5	50	50	ENSMUST00000086932.10	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48048691	48096890	+	48048241	48096890	A5SS	0.11	50	50	ENSMUST00000086932.10	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48049129	48096890	+	48048241	48096890	A5SS	0.11	50	50	ENSMUST00000086932.10	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48050893	48096890	+	48048241	48096890	A5SS	0.11	50	50	ENSMUST00000086932.10	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48065457	48096890	+	48048241	48096890	A5SS	0.11	50	50	ENSMUST00000086932.10	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48070431	48096890	+	48048241	48096890	A5SS	0.11	50	50	ENSMUST00000086932.10	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48074191	48096890	+	48048241	48096890	A5SS	0.11	50	50	ENSMUST00000086932.10	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48080444	48096890	+	48048241	48096890	A5SS	0.11	50	50	ENSMUST00000086932.10	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48093902	48096890	+	48048241	48096890	A5SS	0.11	50	50	ENSMUST00000086932.10	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48098621	48098951	+	48097936	48098951	A5SS	0.5	50	50	ENSMUST00000086932.10	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48049129	48096890	+	48048691	48096890	A5SS	0.11	50	50	ENSMUST00000126258.8	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48050893	48096890	+	48048691	48096890	A5SS	0.11	50	50	ENSMUST00000126258.8	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48065457	48096890	+	48048691	48096890	A5SS	0.11	50	50	ENSMUST00000126258.8	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48070431	48096890	+	48048691	48096890	A5SS	0.11	50	50	ENSMUST00000126258.8	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48074191	48096890	+	48048691	48096890	A5SS	0.11	50	50	ENSMUST00000126258.8	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48080444	48096890	+	48048691	48096890	A5SS	0.11	50	50	ENSMUST00000126258.8	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48093902	48096890	+	48048691	48096890	A5SS	0.11	50	50	ENSMUST00000126258.8	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48050893	48096890	+	48049129	48096890	A5SS	0.11	50	50	ENSMUST00000113288.8	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48065457	48096890	+	48049129	48096890	A5SS	0.11	50	50	ENSMUST00000113288.8	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48070431	48096890	+	48049129	48096890	A5SS	0.11	50	50	ENSMUST00000113288.8	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48074191	48096890	+	48049129	48096890	A5SS	0.11	50	50	ENSMUST00000113288.8	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48080444	48096890	+	48049129	48096890	A5SS	0.11	50	50	ENSMUST00000113288.8	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48093902	48096890	+	48049129	48096890	A5SS	0.11	50	50	ENSMUST00000113288.8	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48065457	48096890	+	48050893	48096890	A5SS	0.11	50	50	ENSMUST00000113284.8	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48070431	48096890	+	48050893	48096890	A5SS	0.11	50	50	ENSMUST00000113284.8	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48074191	48096890	+	48050893	48096890	A5SS	0.11	50	50	ENSMUST00000113284.8	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48080444	48096890	+	48050893	48096890	A5SS	0.11	50	50	ENSMUST00000113284.8	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48093902	48096890	+	48050893	48096890	A5SS	0.11	50	50	ENSMUST00000113284.8	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48070431	48096890	+	48065457	48096890	A5SS	0.11	50	50	ENSMUST00000137845.2	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48074191	48096890	+	48065457	48096890	A5SS	0.11	50	50	ENSMUST00000137845.2	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48080444	48096890	+	48065457	48096890	A5SS	0.11	50	50	ENSMUST00000137845.2	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48093902	48096890	+	48065457	48096890	A5SS	0.11	50	50	ENSMUST00000137845.2	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48074191	48096890	+	48070431	48096890	A5SS	0.11	50	50	ENSMUST00000125177.2	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48080444	48096890	+	48070431	48096890	A5SS	0.11	50	50	ENSMUST00000125177.2	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48093902	48096890	+	48070431	48096890	A5SS	0.11	50	50	ENSMUST00000125177.2	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48097121	48097856	+	48097121	48097203	3pMXE	0.5	50	50	ENSMUST00000130208.8	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48080444	48096890	+	48074191	48096890	A5SS	0.11	50	50	ENSMUST00000130208.8	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48093902	48096890	+	48074191	48096890	A5SS	0.11	50	50	ENSMUST00000130208.8	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48093902	48096890	+	48080444	48096890	A5SS	0.5	50	50	ENSMUST00000160373.8	ENSMUSG00000023990.19	Tfeb	chr17	protein_coding	transcription factor EB
chr17	48143955	48144170	-	48143955	48144038	5pMXE	0.25	50	50	ENSMUST00000113280.8	ENSMUSG00000032717.15	Mdfi	chr17	protein_coding	MyoD family inhibitor
chr17	48143955	48145238	-	48143955	48144038	5pMXE	0.25	50	50	ENSMUST00000113280.8	ENSMUSG00000032717.15	Mdfi	chr17	protein_coding	MyoD family inhibitor
chr17	48131966;48135652	48135473;48143869	-	48131966	48143869	cassetteExon	0.5	100	100	ENSMUST00000113280.8	ENSMUSG00000032717.15	Mdfi	chr17	protein_coding	MyoD family inhibitor
chr17	48141619	48143869	-	48131966	48143869	A3SS	0.33	50	50	ENSMUST00000113280.8	ENSMUSG00000032717.15	Mdfi	chr17	protein_coding	MyoD family inhibitor
chr17	48143955	48144131	-	48143955	48144038	A5SS	0.25	50	50	ENSMUST00000113280.8	ENSMUSG00000032717.15	Mdfi	chr17	protein_coding	MyoD family inhibitor
chr17	48135652;48141619	48141516;48143869	-	48135652	48143869	cassetteExon	0.5	100	100	ENSMUST00000066368.13	ENSMUSG00000032717.15	Mdfi	chr17	protein_coding	MyoD family inhibitor
chr17	48143955	48144131	-	48143955	48145238	A5SS	0.25	50	50	ENSMUST00000066368.13	ENSMUSG00000032717.15	Mdfi	chr17	protein_coding	MyoD family inhibitor
chr17	48143955	48144170	-	48143955	48145238	A5SS	0.25	50	50	ENSMUST00000066368.13	ENSMUSG00000032717.15	Mdfi	chr17	protein_coding	MyoD family inhibitor
chr17	48143955	48144131	-	48143955	48144170	A5SS	0.25	50	50	ENSMUST00000035375.14	ENSMUSG00000032717.15	Mdfi	chr17	protein_coding	MyoD family inhibitor
chr17	48131966	48143869	-	48135652	48143869	3pMXE	0.33	50	50	ENSMUST00000129360.2	ENSMUSG00000032717.15	Mdfi	chr17	protein_coding	MyoD family inhibitor
chr17	48186649	48186765	-	48186613	48186765	A3SS	0.5	50	50	ENSMUST00000113265.8	ENSMUSG00000023991.17	Foxp4	chr17	protein_coding	forkhead box P4
chr17	48189422	48189532	-	48189419	48189532	A3SS	0.5	50	50	ENSMUST00000113265.8	ENSMUSG00000023991.17	Foxp4	chr17	protein_coding	forkhead box P4
chr17	48191268	48191695	-	48191274	48191695	A3SS	0.5	50	50	ENSMUST00000113265.8	ENSMUSG00000023991.17	Foxp4	chr17	protein_coding	forkhead box P4
chr17	48199145	48199322	-	48199145	48215221	A5SS	0.5	50	50	ENSMUST00000113265.8	ENSMUSG00000023991.17	Foxp4	chr17	protein_coding	forkhead box P4
chr17	48439184;48442275	48442185;48452568	-	48439184	48452568	cassetteExon	0.5	100	100	ENSMUST00000063481.9	ENSMUSG00000073386.6	9830107B12Rik	chr17	protein_coding	RIKEN cDNA 9830107B12 gene
chr17	48452732	48453122	-	48452879	48453122	A3SS	0.5	50	50	ENSMUST00000063481.9	ENSMUSG00000073386.6	9830107B12Rik	chr17	protein_coding	RIKEN cDNA 9830107B12 gene
chr17	48460140;48470609	48470426;48473546	-	48460140	48473546	cassetteExon	0.5	100	100	ENSMUST00000232817.3	ENSMUSG00000043939.17	A530064D06Rik	chr17	protein_coding	RIKEN cDNA A530064D06 gene
chr17	48539871;48544382	48544026;48548514	+	48539871	48548514	cassetteExon	0.5	100	100	ENSMUST00000113251.10	ENSMUSG00000042265.14	Trem1	chr17	protein_coding	triggering receptor expressed on myeloid cells 1
chr17	48576794	48581408	+	48576794;48579846	48579717;48581408	ES	0.5	50	50	ENSMUST00000059873.14	ENSMUSG00000051682.16	Treml4	chr17	protein_coding	triggering receptor expressed on myeloid cells-like 4
chr17	48571468	48571672	+	48571468	48571660	A3SS	0.5	50	50	ENSMUST00000059873.14	ENSMUSG00000051682.16	Treml4	chr17	protein_coding	triggering receptor expressed on myeloid cells-like 4
chr17	48576464	48576710	+	48576464	48576713	A3SS	0.33	50	50	ENSMUST00000059873.14	ENSMUSG00000051682.16	Treml4	chr17	protein_coding	triggering receptor expressed on myeloid cells-like 4
chr17	48576464	48576737	+	48576464	48576713	A3SS	0.33	50	50	ENSMUST00000059873.14	ENSMUSG00000051682.16	Treml4	chr17	protein_coding	triggering receptor expressed on myeloid cells-like 4
chr17	48576464	48576737	+	48576464	48576710	A3SS	0.33	50	50	ENSMUST00000154335.8	ENSMUSG00000051682.16	Treml4	chr17	protein_coding	triggering receptor expressed on myeloid cells-like 4
chr17	48576794	48581408	+	48579846	48581408	5pMXE	0.5	50	50	ENSMUST00000153131.2	ENSMUSG00000051682.16	Treml4	chr17	protein_coding	triggering receptor expressed on myeloid cells-like 4
chr17	48609960	48613388	+	48609960	48610757	3pMXE	0.25	50	50	ENSMUST00000233496.2	ENSMUSG00000071068.8	Treml2	chr17	protein_coding	triggering receptor expressed on myeloid cells-like 2
chr17	48609960	48614908	+	48609960	48610757	3pMXE	0.25	50	50	ENSMUST00000233496.2	ENSMUSG00000071068.8	Treml2	chr17	protein_coding	triggering receptor expressed on myeloid cells-like 2
chr17	48609960	48615085	+	48609960	48610757	3pMXE	0.25	50	50	ENSMUST00000233496.2	ENSMUSG00000071068.8	Treml2	chr17	protein_coding	triggering receptor expressed on myeloid cells-like 2
chr17	48609960	48613388	+	48609960	48614908	A3SS	0.25	50	50	ENSMUST00000233092.2	ENSMUSG00000071068.8	Treml2	chr17	protein_coding	triggering receptor expressed on myeloid cells-like 2
chr17	48609960	48615085	+	48609960	48614908	A3SS	0.25	50	50	ENSMUST00000233092.2	ENSMUSG00000071068.8	Treml2	chr17	protein_coding	triggering receptor expressed on myeloid cells-like 2
chr17	48609960	48615085	+	48609960	48613388	3pMXE	0.25	50	50	ENSMUST00000233602.2	ENSMUSG00000071068.8	Treml2	chr17	protein_coding	triggering receptor expressed on myeloid cells-like 2
chr17	48624070;48625496	48625406;48626179	+	48624070	48626179	cassetteExon	0.5	100	100	ENSMUST00000049614.13	ENSMUSG00000043740.16	B430306N03Rik	chr17	protein_coding	RIKEN cDNA B430306N03 gene
chr17	48655835	48657519	+	48655835	48658129	A3SS	0.5	50	50	ENSMUST00000024791.15	ENSMUSG00000023992.15	Trem2	chr17	protein_coding	triggering receptor expressed on myeloid cells 2
chr17	48658219	48658719	+	48658219	48658774	A3SS	0.5	50	50	ENSMUST00000024791.15	ENSMUSG00000023992.15	Trem2	chr17	protein_coding	triggering receptor expressed on myeloid cells 2
chr17	48673076	48673751	+	48673076	48673648	A3SS	0.5	50	50	ENSMUST00000224001.2	ENSMUSG00000023993.8	Treml1	chr17	protein_coding	triggering receptor expressed on myeloid cells-like 1
chr17	48667266	48671887	+	48667495	48671887	A5SS	0.5	50	50	ENSMUST00000224001.2	ENSMUSG00000023993.8	Treml1	chr17	protein_coding	triggering receptor expressed on myeloid cells-like 1
chr17	48672025	48672536	+	48672040	48672536	A5SS	0.5	50	50	ENSMUST00000224001.2	ENSMUSG00000023993.8	Treml1	chr17	protein_coding	triggering receptor expressed on myeloid cells-like 1
chr17	48702824	48707466	-	48702824;48706093	48706010;48707466	ES	0.33	50	50	ENSMUST00000078800.13	ENSMUSG00000023994.14	Nfya	chr17	protein_coding	nuclear transcription factor-Y alpha
chr17	48699534;48699979	48699896;48700208	-	48699534	48700208	cassetteExon	0.5	100	100	ENSMUST00000078800.13	ENSMUSG00000023994.14	Nfya	chr17	protein_coding	nuclear transcription factor-Y alpha
chr17	48699516	48700208	-	48699534	48700208	A3SS	0.25	50	50	ENSMUST00000078800.13	ENSMUSG00000023994.14	Nfya	chr17	protein_coding	nuclear transcription factor-Y alpha
chr17	48699528	48700208	-	48699534	48700208	A3SS	0.25	50	50	ENSMUST00000078800.13	ENSMUSG00000023994.14	Nfya	chr17	protein_coding	nuclear transcription factor-Y alpha
chr17	48706096	48707466	-	48706093	48707466	A3SS	0.33	50	50	ENSMUST00000078800.13	ENSMUSG00000023994.14	Nfya	chr17	protein_coding	nuclear transcription factor-Y alpha
chr17	48702824	48706013	-	48702824	48706010	A5SS	0.33	50	50	ENSMUST00000078800.13	ENSMUSG00000023994.14	Nfya	chr17	protein_coding	nuclear transcription factor-Y alpha
chr17	48702824;48706093	48706013;48707466	-	48702824	48707466	cassetteExon	0.5	100	100	ENSMUST00000162460.8	ENSMUSG00000023994.14	Nfya	chr17	protein_coding	nuclear transcription factor-Y alpha
chr17	48702824;48706096	48706010;48707466	-	48702824	48707466	cassetteExon	0.5	100	100	ENSMUST00000162460.8	ENSMUSG00000023994.14	Nfya	chr17	protein_coding	nuclear transcription factor-Y alpha
chr17	48702824;48706096	48706013;48707466	-	48702824	48707466	cassetteExon	0.5	100	100	ENSMUST00000162460.8	ENSMUSG00000023994.14	Nfya	chr17	protein_coding	nuclear transcription factor-Y alpha
chr17	48699528	48700208	-	48699516	48700208	A3SS	0.25	50	50	ENSMUST00000159063.8	ENSMUSG00000023994.14	Nfya	chr17	protein_coding	nuclear transcription factor-Y alpha
chr17	48699979	48700208	-	48699516	48700208	A3SS	0.25	50	50	ENSMUST00000159063.8	ENSMUSG00000023994.14	Nfya	chr17	protein_coding	nuclear transcription factor-Y alpha
chr17	48699528	48700208	-	48699979	48700208	A3SS&ES	0.25	50	50	ENSMUST00000159237.8	ENSMUSG00000023994.14	Nfya	chr17	protein_coding	nuclear transcription factor-Y alpha
chr17	48702824	48707466	-	48702824	48706010	5pMXE	0.33	50	50	ENSMUST00000161117.8	ENSMUSG00000023994.14	Nfya	chr17	protein_coding	nuclear transcription factor-Y alpha
chr17	48717265	48717856	+	48717400	48717856	A5SS	0.5	50	50	ENSMUST00000167180.8	ENSMUSG00000040771.15	Oard1	chr17	protein_coding	O-acyl-ADP-ribose deacylase 1
chr17	48738707	48739507	-	48730533	48739507	A3SS	0.5	50	50	ENSMUST00000046549.5	ENSMUSG00000040694.5	Apobec2	chr17	protein_coding	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2
chr17	48755828	48756911	-	48755828;48756189	48756048;48756911	ES	0.5	50	50	ENSMUST00000024794.12	ENSMUSG00000023995.13	Tspo2	chr17	protein_coding	translocator protein 2
chr17	48756189	48756995	-	48756189	48756911	A5SS	0.5	50	50	ENSMUST00000024794.12	ENSMUSG00000023995.13	Tspo2	chr17	protein_coding	translocator protein 2
chr17	48755828	48756911	-	48755828	48756048	A5SS&ES	0.5	50	50	ENSMUST00000159988.2	ENSMUSG00000023995.13	Tspo2	chr17	protein_coding	translocator protein 2
chr17	48770491	48771470	+	48770491;48770672	48770605;48771470	ES	0.5	50	50	ENSMUST00000074574.13	ENSMUSG00000043592.16	Unc5cl	chr17	protein_coding	unc-5 family C-terminal like
chr17	48772057	48829707	+	48772057	48774344	3pMXE	0.5	50	50	ENSMUST00000074574.13	ENSMUSG00000043592.16	Unc5cl	chr17	protein_coding	unc-5 family C-terminal like
chr17	48770491	48771509	+	48770491	48770605	A3SS&ES	0.33	50	50	ENSMUST00000074574.13	ENSMUSG00000043592.16	Unc5cl	chr17	protein_coding	unc-5 family C-terminal like
chr17	48770672	48771502	+	48770672	48771470	A3SS	0.5	50	50	ENSMUST00000074574.13	ENSMUSG00000043592.16	Unc5cl	chr17	protein_coding	unc-5 family C-terminal like
chr17	48770491	48771509	+	48770491	48771470	A3SS	0.33	50	50	ENSMUST00000161587.8	ENSMUSG00000043592.16	Unc5cl	chr17	protein_coding	unc-5 family C-terminal like
chr17	48829797	48846465	+	48829814	48846465	A5SS	0.5	50	50	ENSMUST00000162313.8	ENSMUSG00000043592.16	Unc5cl	chr17	protein_coding	unc-5 family C-terminal like
chr17	48770491	48771470	+	48770491	48770605	A3SS&ES	0.33	50	50	ENSMUST00000162132.8	ENSMUSG00000043592.16	Unc5cl	chr17	protein_coding	unc-5 family C-terminal like
chr17	49419877	49420345	-	49419877	49420201	A5SS&ES	0.33	50	50	ENSMUST00000185974.7	ENSMUSG00000101012.7	1700008K24Rik	chr17	lncRNA	RIKEN cDNA 1700008K24 gene
chr17	49419877	49420462	-	49419877	49420201	A5SS&ES	0.33	50	50	ENSMUST00000185974.7	ENSMUSG00000101012.7	1700008K24Rik	chr17	lncRNA	RIKEN cDNA 1700008K24 gene
chr17	49419877	49420345	-	49419877	49420462	A5SS	0.33	50	50	ENSMUST00000190269.2	ENSMUSG00000101012.7	1700008K24Rik	chr17	lncRNA	RIKEN cDNA 1700008K24 gene
chr17	49419877	49420345	-	49419877;49420253	49420201;49420345	ES	0.5	50	50	ENSMUST00000187177.7	ENSMUSG00000101012.7	1700008K24Rik	chr17	lncRNA	RIKEN cDNA 1700008K24 gene
chr17	49615432	49618325	-	49615432	49618914	A5SS	0.5	50	50	ENSMUST00000233582.2	ENSMUSG00000117221.2	Gm17830	chr17	lncRNA	predicted gene, 17830
chr17	49735592	49742123	+	49735592;49740324	49740198;49742123	ES	0.5	50	50	ENSMUST00000165390.9	ENSMUSG00000064120.15	Mocs1	chr17	protein_coding	molybdenum cofactor synthesis 1
chr17	49742290	49746450	+	49742290	49744739	3pMXE	0.5	50	50	ENSMUST00000165390.9	ENSMUSG00000064120.15	Mocs1	chr17	protein_coding	molybdenum cofactor synthesis 1
chr17	49759359	49761058	+	49759359;49759885	49759823;49761058	ES	0.33	50	50	ENSMUST00000024797.16	ENSMUSG00000064120.15	Mocs1	chr17	protein_coding	molybdenum cofactor synthesis 1
chr17	49746624	49756128	+	49746614	49756128	A5SS	0.5	50	50	ENSMUST00000024797.16	ENSMUSG00000064120.15	Mocs1	chr17	protein_coding	molybdenum cofactor synthesis 1
chr17	49759870	49761058	+	49759885	49761058	A5SS	0.33	50	50	ENSMUST00000024797.16	ENSMUSG00000064120.15	Mocs1	chr17	protein_coding	molybdenum cofactor synthesis 1
chr17	49759359	49761058	+	49759359;49759870	49759823;49761058	ES	0.33	50	50	ENSMUST00000173033.8	ENSMUSG00000064120.15	Mocs1	chr17	protein_coding	molybdenum cofactor synthesis 1
chr17	49735592	49742123	+	49740324	49742123	5pMXE	0.5	50	50	ENSMUST00000174268.2	ENSMUSG00000064120.15	Mocs1	chr17	protein_coding	molybdenum cofactor synthesis 1
chr17	49931554;49933256	49933177;49978061	+	49931554	49978061	cassetteExon	0.5	100	100	ENSMUST00000024798.12	ENSMUSG00000023999.15	Kif6	chr17	protein_coding	kinesin family member 6
chr17	50045882	50060850	+	50029372	50060850	A5SS	0.5	50	50	ENSMUST00000024798.12	ENSMUSG00000023999.15	Kif6	chr17	protein_coding	kinesin family member 6
chr17	50196374	50197032	+	50177972	50197032	A5SS	0.5	50	50	ENSMUST00000162854.2	ENSMUSG00000023999.15	Kif6	chr17	protein_coding	kinesin family member 6
chr17	50393704	50401204	-	50393704	50414098	A5SS	0.5	50	50	ENSMUST00000044503.14	ENSMUSG00000039316.15	Rftn1	chr17	protein_coding	raftlin lipid raft linker 1
chr17	50591379	50593279	-	50591379;50592074	50592024;50593279	ES	0.5	50	50	ENSMUST00000233248.2	ENSMUSG00000010592.10	Dazl	chr17	protein_coding	deleted in azoospermia-like
chr17	50596266	50600435	-	50596266	50599849	5pMXE	0.5	50	50	ENSMUST00000233248.2	ENSMUSG00000010592.10	Dazl	chr17	protein_coding	deleted in azoospermia-like
chr17	50918223	50919701	+	50918223	50947144	A3SS	0.5	50	50	ENSMUST00000043938.8	ENSMUSG00000038910.8	Plcl2	chr17	protein_coding	phospholipase C-like 2
chr17	51291702	51450387	-	51291702;51332232	51332102;51450387	ES	0.5	50	50	ENSMUST00000024717.10	ENSMUSG00000023923.11	Tbc1d5	chr17	protein_coding	TBC1 domain family, member 5
chr17	51089452;51103019	51102954;51106895	-	51089452	51106895	cassetteExon	0.5	100	100	ENSMUST00000024717.10	ENSMUSG00000023923.11	Tbc1d5	chr17	protein_coding	TBC1 domain family, member 5
chr17	51270788;51273086	51272921;51273580	-	51270788	51273580	cassetteExon	0.5	100	100	ENSMUST00000024717.10	ENSMUSG00000023923.11	Tbc1d5	chr17	protein_coding	TBC1 domain family, member 5
chr17	51226269	51227543	-	51226240	51227543	A3SS	0.5	50	50	ENSMUST00000024717.10	ENSMUSG00000023923.11	Tbc1d5	chr17	protein_coding	TBC1 domain family, member 5
chr17	51261142	51270721	-	51242586	51270721	A3SS	0.5	50	50	ENSMUST00000024717.10	ENSMUSG00000023923.11	Tbc1d5	chr17	protein_coding	TBC1 domain family, member 5
chr17	51450449	51466187	-	51450449	51486128	A5SS	0.5	50	50	ENSMUST00000024717.10	ENSMUSG00000023923.11	Tbc1d5	chr17	protein_coding	TBC1 domain family, member 5
chr17	51291702	51450387	-	51332232	51450387	3pMXE	0.5	50	50	ENSMUST00000225473.2	ENSMUSG00000023923.11	Tbc1d5	chr17	protein_coding	TBC1 domain family, member 5
chr17	52116315	52140191	-	52116315	52139498	5pMXE	0.16	50	50	ENSMUST00000144331.8	ENSMUSG00000023927.16	Satb1	chr17	protein_coding	special AT-rich sequence binding protein 1
chr17	52047441;52049170	52049075;52049674	-	52047441	52049674	cassetteExon	0.5	100	100	ENSMUST00000144331.8	ENSMUSG00000023927.16	Satb1	chr17	protein_coding	special AT-rich sequence binding protein 1
chr17	52109464	52110459	-	52092668	52110459	A3SS	0.5	50	50	ENSMUST00000144331.8	ENSMUSG00000023927.16	Satb1	chr17	protein_coding	special AT-rich sequence binding protein 1
chr17	52116315	52118796	-	52116315	52139498	A5SS	0.16	50	50	ENSMUST00000144331.8	ENSMUSG00000023927.16	Satb1	chr17	protein_coding	special AT-rich sequence binding protein 1
chr17	52116315	52127804	-	52116315	52139498	A5SS	0.16	50	50	ENSMUST00000144331.8	ENSMUSG00000023927.16	Satb1	chr17	protein_coding	special AT-rich sequence binding protein 1
chr17	52116315	52133462	-	52116315	52139498	A5SS	0.16	50	50	ENSMUST00000144331.8	ENSMUSG00000023927.16	Satb1	chr17	protein_coding	special AT-rich sequence binding protein 1
chr17	52116315	52138835	-	52116315	52139498	A5SS	0.16	50	50	ENSMUST00000144331.8	ENSMUSG00000023927.16	Satb1	chr17	protein_coding	special AT-rich sequence binding protein 1
chr17	52116315	52138835	-	52116315	52133462	5pMXE	0.16	50	50	ENSMUST00000169480.8	ENSMUSG00000023927.16	Satb1	chr17	protein_coding	special AT-rich sequence binding protein 1
chr17	52116315	52140191	-	52116315	52133462	5pMXE	0.16	50	50	ENSMUST00000169480.8	ENSMUSG00000023927.16	Satb1	chr17	protein_coding	special AT-rich sequence binding protein 1
chr17	52116306	52133462	-	52116315	52133462	A3SS	0.33	50	50	ENSMUST00000169480.8	ENSMUSG00000023927.16	Satb1	chr17	protein_coding	special AT-rich sequence binding protein 1
chr17	52129870	52133462	-	52116315	52133462	A3SS	0.33	50	50	ENSMUST00000169480.8	ENSMUSG00000023927.16	Satb1	chr17	protein_coding	special AT-rich sequence binding protein 1
chr17	52116315	52118796	-	52116315	52133462	A5SS	0.16	50	50	ENSMUST00000169480.8	ENSMUSG00000023927.16	Satb1	chr17	protein_coding	special AT-rich sequence binding protein 1
chr17	52116315	52127804	-	52116315	52133462	A5SS	0.16	50	50	ENSMUST00000169480.8	ENSMUSG00000023927.16	Satb1	chr17	protein_coding	special AT-rich sequence binding protein 1
chr17	52116315	52118796	-	52116315	52140191	A5SS	0.16	50	50	ENSMUST00000133574.8	ENSMUSG00000023927.16	Satb1	chr17	protein_coding	special AT-rich sequence binding protein 1
chr17	52116315	52127804	-	52116315	52140191	A5SS	0.16	50	50	ENSMUST00000133574.8	ENSMUSG00000023927.16	Satb1	chr17	protein_coding	special AT-rich sequence binding protein 1
chr17	52116315	52138835	-	52116315	52140191	A5SS	0.16	50	50	ENSMUST00000133574.8	ENSMUSG00000023927.16	Satb1	chr17	protein_coding	special AT-rich sequence binding protein 1
chr17	52129870	52133462	-	52116306	52133462	A3SS	0.33	50	50	ENSMUST00000129667.8	ENSMUSG00000023927.16	Satb1	chr17	protein_coding	special AT-rich sequence binding protein 1
chr17	52116306	52118796	-	52116306	52133462	A5SS	0.5	50	50	ENSMUST00000129667.8	ENSMUSG00000023927.16	Satb1	chr17	protein_coding	special AT-rich sequence binding protein 1
chr17	52116315	52127804	-	52116315	52118796	5pMXE	0.16	50	50	ENSMUST00000152830.9	ENSMUSG00000023927.16	Satb1	chr17	protein_coding	special AT-rich sequence binding protein 1
chr17	52116315	52138835	-	52116315	52118796	5pMXE	0.16	50	50	ENSMUST00000152830.9	ENSMUSG00000023927.16	Satb1	chr17	protein_coding	special AT-rich sequence binding protein 1
chr17	52116306	52118796	-	52116315	52118796	A3SS	0.5	50	50	ENSMUST00000152830.9	ENSMUSG00000023927.16	Satb1	chr17	protein_coding	special AT-rich sequence binding protein 1
chr17	52047441	52049075	-	52047438	52049075	A3SS	0.5	50	50	ENSMUST00000140979.8	ENSMUSG00000023927.16	Satb1	chr17	protein_coding	special AT-rich sequence binding protein 1
chr17	52047441	52049674	-	52049170	52049674	A3SS&ES	0.5	50	50	ENSMUST00000140979.8	ENSMUSG00000023927.16	Satb1	chr17	protein_coding	special AT-rich sequence binding protein 1
chr17	52047441	52049674	-	52047441	52049075	5pMXE	0.5	50	50	ENSMUST00000137697.2	ENSMUSG00000023927.16	Satb1	chr17	protein_coding	special AT-rich sequence binding protein 1
chr17	52116315	52138835	-	52116315	52127804	5pMXE	0.16	50	50	ENSMUST00000129205.8	ENSMUSG00000023927.16	Satb1	chr17	protein_coding	special AT-rich sequence binding protein 1
chr17	52335435	52465519	+	52335435	52469822	A3SS	0.5	50	50	ENSMUST00000233901.2	ENSMUSG00000100150.3	Gm19585	chr17	lncRNA	predicted gene, 19585
chr17	52467446	52469822	+	52335435	52469822	A5SS	0.5	50	50	ENSMUST00000233901.2	ENSMUSG00000100150.3	Gm19585	chr17	lncRNA	predicted gene, 19585
chr17	52456432	52465519	+	52335435	52465519	A5SS	0.5	50	50	ENSMUST00000233877.2	ENSMUSG00000100150.3	Gm19585	chr17	lncRNA	predicted gene, 19585
chr17	53744272	53752773	-	53744241	53752773	A3SS	0.5	50	50	ENSMUST00000024725.5	ENSMUSG00000023931.6	Efhb	chr17	protein_coding	EF hand domain family, member B
chr17	53759651	53769459	-	53752883	53769459	A3SS	0.5	50	50	ENSMUST00000233544.2	ENSMUSG00000023931.6	Efhb	chr17	protein_coding	EF hand domain family, member B
chr17	53752883	53756413	-	53752883	53769459	A5SS	0.5	50	50	ENSMUST00000233544.2	ENSMUSG00000023931.6	Efhb	chr17	protein_coding	EF hand domain family, member B
chr17	53874606	53917892	+	53873943	53917892	A5SS	0.33	50	50	ENSMUST00000163648.2	ENSMUSG00000000708.15	Kat2b	chr17	protein_coding	K(lysine) acetyltransferase 2B
chr17	53891207	53917892	+	53873943	53917892	A5SS	0.33	50	50	ENSMUST00000163648.2	ENSMUSG00000000708.15	Kat2b	chr17	protein_coding	K(lysine) acetyltransferase 2B
chr17	53970677	53972681	+	53970677;53972470	53972434;53972681	ES	0.5	50	50	ENSMUST00000000724.15	ENSMUSG00000000708.15	Kat2b	chr17	protein_coding	K(lysine) acetyltransferase 2B
chr17	53955911	53978838	+	53955911	53960050	A3SS&ES	0.5	50	50	ENSMUST00000000724.15	ENSMUSG00000000708.15	Kat2b	chr17	protein_coding	K(lysine) acetyltransferase 2B
chr17	53891207	53917892	+	53874606	53917892	A5SS	0.33	50	50	ENSMUST00000000724.15	ENSMUSG00000000708.15	Kat2b	chr17	protein_coding	K(lysine) acetyltransferase 2B
chr17	53995148	53996208	-	53995148	53996239	A5SS	0.5	50	50	ENSMUST00000024736.14	ENSMUSG00000023940.15	Sgo1	chr17	protein_coding	shugoshin 1
chr17	54604219	54605333	-	54604219	54605609	A5SS	0.5	50	50	ENSMUST00000095712.5	ENSMUSG00000023945.8	Slc5a7	chr17	protein_coding	solute carrier family 5 (choline transporter), member 7
chr17	55753427	55788906	+	55752810	55788906	A5SS	0.5	50	50	ENSMUST00000133899.2	ENSMUSG00000024172.11	St6gal2	chr17	protein_coding	beta galactoside alpha 2,6 sialyltransferase 2
chr17	55918012	55931473	-	55918012;55918690	55918393;55931473	ES	0.33	50	50	ENSMUST00000168440.3	ENSMUSG00000091504.3	Vmn2r118	chr17	protein_coding	vomeronasal 2, receptor 118
chr17	55918927	55931473	-	55918690	55931473	A3SS	0.33	50	50	ENSMUST00000168440.3	ENSMUSG00000091504.3	Vmn2r118	chr17	protein_coding	vomeronasal 2, receptor 118
chr17	55918012	55931473	-	55918012;55918927	55918393;55931473	ES	0.33	50	50	ENSMUST00000234172.2	ENSMUSG00000091504.3	Vmn2r118	chr17	protein_coding	vomeronasal 2, receptor 118
chr17	55918927	55931473	-	55918012	55931473	A3SS	0.33	50	50	ENSMUST00000234385.2	ENSMUSG00000091504.3	Vmn2r118	chr17	protein_coding	vomeronasal 2, receptor 118
chr17	56013152;56016086	56015998;56017839	-	56013152	56017839	cassetteExon	0.5	100	100	ENSMUST00000233802.2	ENSMUSG00000024174.10	Pot1b	chr17	protein_coding	protection of telomeres 1B
chr17	55976896	55979831	-	55976896	55979772	A5SS	0.5	50	50	ENSMUST00000233802.2	ENSMUSG00000024174.10	Pot1b	chr17	protein_coding	protection of telomeres 1B
chr17	56199186	56202821	+	56199186;56199860	56199758;56202821	ES	0.5	50	50	ENSMUST00000224379.2	ENSMUSG00000003198.11	Zfp959	chr17	protein_coding	zinc finger protein 959
chr17	56199186	56202821	+	56199860	56202821	5pMXE	0.5	50	50	ENSMUST00000224294.2	ENSMUSG00000003198.11	Zfp959	chr17	protein_coding	zinc finger protein 959
chr17	56248312	56256224	-	56248312	56252172	5pMXE	0.5	50	50	ENSMUST00000056147.14	ENSMUSG00000062101.13	Zfp119b	chr17	protein_coding	zinc finger protein 119b
chr17	56272289;56273637	56273508;56274528	+	56272289	56274528	cassetteExon	0.5	100	100	ENSMUST00000233661.2	ENSMUSG00000003208.10	Yju2	chr17	protein_coding	YJU2 splicing factor
chr17	56278717	56279785	+	56278717	56279788	A3SS	0.5	50	50	ENSMUST00000044216.8	ENSMUSG00000039154.9	Shd	chr17	protein_coding	src homology 2 domain-containing transforming protein D
chr17	56293653	56294743	+	56293653	56293843	3pMXE	0.5	50	50	ENSMUST00000233772.2	ENSMUSG00000011589.10	Fsd1	chr17	protein_coding	fibronectin type 3 and SPRY domain-containing protein
chr17	56303323	56303642	+	56303323;56303509	56303421;56303642	ES	0.5	50	50	ENSMUST00000011733.9	ENSMUSG00000011589.10	Fsd1	chr17	protein_coding	fibronectin type 3 and SPRY domain-containing protein
chr17	56316586	56317277	+	56312814	56317277	A5SS	0.5	50	50	ENSMUST00000133998.8	ENSMUSG00000003199.17	Mpnd	chr17	protein_coding	MPN domain containing
chr17	56322278	56322904	+	56322278;56322560	56322471;56322904	ES	0.5	50	50	ENSMUST00000149441.8	ENSMUSG00000003199.17	Mpnd	chr17	protein_coding	MPN domain containing
chr17	56319492	56322028	+	56319492	56321941	A3SS	0.5	50	50	ENSMUST00000149441.8	ENSMUSG00000003199.17	Mpnd	chr17	protein_coding	MPN domain containing
chr17	56318962;56319492	56319271;56321941	+	56318962	56321941	cassetteExon	0.5	100	100	ENSMUST00000162883.8	ENSMUSG00000003199.17	Mpnd	chr17	protein_coding	MPN domain containing
chr17	56318962	56321941	+	56318962	56319271	3pMXE	0.5	50	50	ENSMUST00000124302.8	ENSMUSG00000003199.17	Mpnd	chr17	protein_coding	MPN domain containing
chr17	56322278	56322904	+	56322278	56322471	3pMXE	0.5	50	50	ENSMUST00000153197.2	ENSMUSG00000003199.17	Mpnd	chr17	protein_coding	MPN domain containing
chr17	56324900	56325575	-	56324900;56325107	56324983;56325575	ES	0.5	50	50	ENSMUST00000003268.11	ENSMUSG00000003200.11	Sh3gl1	chr17	protein_coding	SH3-domain GRB2-like 1
chr17	56377254	56377652	-	56376775	56377652	A3SS	0.5	50	50	ENSMUST00000019722.12	ENSMUSG00000019578.12	Ubxn6	chr17	protein_coding	UBX domain protein 6
chr17	56380236	56381424	-	56380236	56381836	A5SS	0.5	50	50	ENSMUST00000019722.12	ENSMUSG00000019578.12	Ubxn6	chr17	protein_coding	UBX domain protein 6
chr17	56403276	56403821	+	56403276	56403848	A3SS	0.33	50	50	ENSMUST00000226053.2	ENSMUSG00000002833.12	Hdgfl2	chr17	protein_coding	HDGF like 2
chr17	56403276	56403851	+	56403276	56403848	A3SS	0.33	50	50	ENSMUST00000226053.2	ENSMUSG00000002833.12	Hdgfl2	chr17	protein_coding	HDGF like 2
chr17	56406985	56407348	+	56406985	56407345	A3SS	0.5	50	50	ENSMUST00000226053.2	ENSMUSG00000002833.12	Hdgfl2	chr17	protein_coding	HDGF like 2
chr17	56387118	56389100	+	56386826	56389100	A5SS	0.33	50	50	ENSMUST00000226053.2	ENSMUSG00000002833.12	Hdgfl2	chr17	protein_coding	HDGF like 2
chr17	56388716	56389100	+	56386826	56389100	A5SS	0.33	50	50	ENSMUST00000226053.2	ENSMUSG00000002833.12	Hdgfl2	chr17	protein_coding	HDGF like 2
chr17	56403276	56403821	+	56403276	56403851	A3SS	0.33	50	50	ENSMUST00000002911.10	ENSMUSG00000002833.12	Hdgfl2	chr17	protein_coding	HDGF like 2
chr17	56388716	56389100	+	56387118	56389100	A5SS	0.33	50	50	ENSMUST00000224078.2	ENSMUSG00000002833.12	Hdgfl2	chr17	protein_coding	HDGF like 2
chr17	56439868	56440612	-	56439868	56447214	A5SS	0.5	50	50	ENSMUST00000001256.11	ENSMUSG00000001227.13	Sema6b	chr17	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B
chr17	56489715	56490311	-	56489715	56490739	A5SS	0.5	50	50	ENSMUST00000019723.8	ENSMUSG00000019579.14	Mydgf	chr17	protein_coding	myeloid derived growth factor
chr17	56496465	56496990	-	56496465;56496880	56496762;56496990	ES	0.5	50	50	ENSMUST00000223616.2	ENSMUSG00000001229.10	Dpp9	chr17	protein_coding	dipeptidylpeptidase 9
chr17	56594876	56599733	-	56594876	56597454	5pMXE	0.5	50	50	ENSMUST00000019726.8	ENSMUSG00000024197.11	Plin3	chr17	protein_coding	perilipin 3
chr17	56604974	56606991	-	56605032	56606991	A3SS	0.5	50	50	ENSMUST00000097303.3	ENSMUSG00000073380.3	Arrdc5	chr17	protein_coding	arrestin domain containing 5
chr17	56619967	56620065	+	56619967	56620041	A3SS	0.5	50	50	ENSMUST00000001258.15	ENSMUSG00000001228.15	Uhrf1	chr17	protein_coding	ubiquitin-like, containing PHD and RING finger domains, 1
chr17	56627542	56629017	+	56627542	56629021	A3SS	0.5	50	50	ENSMUST00000001258.15	ENSMUSG00000001228.15	Uhrf1	chr17	protein_coding	ubiquitin-like, containing PHD and RING finger domains, 1
chr17	56611393	56612086	+	56610561	56612086	A5SS	0.33	50	50	ENSMUST00000001258.15	ENSMUSG00000001228.15	Uhrf1	chr17	protein_coding	ubiquitin-like, containing PHD and RING finger domains, 1
chr17	56611483	56612086	+	56610561	56612086	A5SS	0.33	50	50	ENSMUST00000001258.15	ENSMUSG00000001228.15	Uhrf1	chr17	protein_coding	ubiquitin-like, containing PHD and RING finger domains, 1
chr17	56611483	56612086	+	56611393	56612086	A5SS	0.33	50	50	ENSMUST00000113035.8	ENSMUSG00000001228.15	Uhrf1	chr17	protein_coding	ubiquitin-like, containing PHD and RING finger domains, 1
chr17	56633229	56658633	+	56633229;56651442	56651334;56658633	ES	0.5	50	50	ENSMUST00000139679.8	ENSMUSG00000024201.13	Kdm4b	chr17	protein_coding	lysine (K)-specific demethylase 4B
chr17	56701106	56701790	+	56701106	56701769	A3SS	0.5	50	50	ENSMUST00000025036.11	ENSMUSG00000024201.13	Kdm4b	chr17	protein_coding	lysine (K)-specific demethylase 4B
chr17	56701889	56703222	+	56701889	56703204	A3SS	0.5	50	50	ENSMUST00000025036.11	ENSMUSG00000024201.13	Kdm4b	chr17	protein_coding	lysine (K)-specific demethylase 4B
chr17	56700578	56700718	+	56696672	56700718	A5SS	0.5	50	50	ENSMUST00000025036.11	ENSMUSG00000024201.13	Kdm4b	chr17	protein_coding	lysine (K)-specific demethylase 4B
chr17	56706800	56708223	+	56707068	56708223	A5SS&ES	0.5	50	50	ENSMUST00000025036.11	ENSMUSG00000024201.13	Kdm4b	chr17	protein_coding	lysine (K)-specific demethylase 4B
chr17	56728352;56728844	56728833;56729129	-	56728352	56729129	cassetteExon	0.5	100	100	ENSMUST00000223859.2	ENSMUSG00000013236.18	Ptprs	chr17	protein_coding	protein tyrosine phosphatase, receptor type, S
chr17	56731977;56736157	56736099;56741453	-	56731977	56741453	cassetteExon	0.5	100	100	ENSMUST00000223859.2	ENSMUSG00000013236.18	Ptprs	chr17	protein_coding	protein tyrosine phosphatase, receptor type, S
chr17	56735966	56741453	-	56731977	56741453	A3SS	0.33	50	50	ENSMUST00000223859.2	ENSMUSG00000013236.18	Ptprs	chr17	protein_coding	protein tyrosine phosphatase, receptor type, S
chr17	56752910	56754360	-	56745055	56754360	A3SS	0.5	50	50	ENSMUST00000223859.2	ENSMUSG00000013236.18	Ptprs	chr17	protein_coding	protein tyrosine phosphatase, receptor type, S
chr17	56729286	56729664	-	56729286	56730183	A5SS	0.5	50	50	ENSMUST00000223859.2	ENSMUSG00000013236.18	Ptprs	chr17	protein_coding	protein tyrosine phosphatase, receptor type, S
chr17	56731977	56732327	-	56731977	56741453	A5SS	0.25	50	50	ENSMUST00000223859.2	ENSMUSG00000013236.18	Ptprs	chr17	protein_coding	protein tyrosine phosphatase, receptor type, S
chr17	56731977	56733387	-	56731977	56741453	A5SS	0.25	50	50	ENSMUST00000223859.2	ENSMUSG00000013236.18	Ptprs	chr17	protein_coding	protein tyrosine phosphatase, receptor type, S
chr17	56765377	56769104	-	56765377	56783340	A5SS	0.33	50	50	ENSMUST00000223859.2	ENSMUSG00000013236.18	Ptprs	chr17	protein_coding	protein tyrosine phosphatase, receptor type, S
chr17	56765377	56781428	-	56765377	56783340	A5SS	0.33	50	50	ENSMUST00000223859.2	ENSMUSG00000013236.18	Ptprs	chr17	protein_coding	protein tyrosine phosphatase, receptor type, S
chr17	56765377	56781428	-	56765377	56769104	5pMXE	0.33	50	50	ENSMUST00000086828.10	ENSMUSG00000013236.18	Ptprs	chr17	protein_coding	protein tyrosine phosphatase, receptor type, S
chr17	56731977	56733387	-	56731977;56732926	56732327;56733387	ES	0.5	50	50	ENSMUST00000067538.6	ENSMUSG00000013236.18	Ptprs	chr17	protein_coding	protein tyrosine phosphatase, receptor type, S
chr17	56733504	56735852	-	56733504;56735132	56734939;56735852	ES	0.5	50	50	ENSMUST00000067538.6	ENSMUSG00000013236.18	Ptprs	chr17	protein_coding	protein tyrosine phosphatase, receptor type, S
chr17	56733504;56734817	56734791;56734939	-	56733504	56734939	cassetteExon	0.5	100	100	ENSMUST00000067538.6	ENSMUSG00000013236.18	Ptprs	chr17	protein_coding	protein tyrosine phosphatase, receptor type, S
chr17	56735966	56741453	-	56736157	56741453	A3SS	0.33	50	50	ENSMUST00000067538.6	ENSMUSG00000013236.18	Ptprs	chr17	protein_coding	protein tyrosine phosphatase, receptor type, S
chr17	56731977	56736099	-	56731977	56732327	A5SS&ES	0.25	50	50	ENSMUST00000067538.6	ENSMUSG00000013236.18	Ptprs	chr17	protein_coding	protein tyrosine phosphatase, receptor type, S
chr17	56735966	56736099	-	56731977	56736099	A3SS	0.5	50	50	ENSMUST00000143018.2	ENSMUSG00000013236.18	Ptprs	chr17	protein_coding	protein tyrosine phosphatase, receptor type, S
chr17	56731977	56733387	-	56731977	56736099	A5SS	0.25	50	50	ENSMUST00000143018.2	ENSMUSG00000013236.18	Ptprs	chr17	protein_coding	protein tyrosine phosphatase, receptor type, S
chr17	56733504	56735852	-	56733504	56734939	5pMXE	0.33	50	50	ENSMUST00000224777.2	ENSMUSG00000013236.18	Ptprs	chr17	protein_coding	protein tyrosine phosphatase, receptor type, S
chr17	56732926	56733387	-	56731977	56733387	A3SS	0.5	50	50	ENSMUST00000224777.2	ENSMUSG00000013236.18	Ptprs	chr17	protein_coding	protein tyrosine phosphatase, receptor type, S
chr17	56731977	56732327	-	56731977	56733387	A5SS	0.5	50	50	ENSMUST00000224777.2	ENSMUSG00000013236.18	Ptprs	chr17	protein_coding	protein tyrosine phosphatase, receptor type, S
chr17	56733504;56735132	56734791;56735852	-	56733504	56735852	cassetteExon	0.5	100	100	ENSMUST00000225104.2	ENSMUSG00000013236.18	Ptprs	chr17	protein_coding	protein tyrosine phosphatase, receptor type, S
chr17	56735966	56741453	-	56735966;56736157	56736099;56741453	ES	0.5	50	50	ENSMUST00000223642.2	ENSMUSG00000013236.18	Ptprs	chr17	protein_coding	protein tyrosine phosphatase, receptor type, S
chr17	56733504	56735852	-	56735132	56735852	3pMXE	0.5	50	50	ENSMUST00000225785.2	ENSMUSG00000013236.18	Ptprs	chr17	protein_coding	protein tyrosine phosphatase, receptor type, S
chr17	56870431	56871504	-	56870431;56870624	56870512;56871504	ES	0.5	50	50	ENSMUST00000142752.8	ENSMUSG00000042625.17	Safb2	chr17	protein_coding	scaffold attachment factor B2
chr17	56870243	56870362	-	56868206	56870362	A3SS	0.5	50	50	ENSMUST00000142752.8	ENSMUSG00000042625.17	Safb2	chr17	protein_coding	scaffold attachment factor B2
chr17	56878549;56881302	56881202;56881903	-	56878549	56881903	cassetteExon	0.5	100	100	ENSMUST00000144255.8	ENSMUSG00000042625.17	Safb2	chr17	protein_coding	scaffold attachment factor B2
chr17	56874015	56874533	-	56874018	56874533	A3SS	0.5	50	50	ENSMUST00000144255.8	ENSMUSG00000042625.17	Safb2	chr17	protein_coding	scaffold attachment factor B2
chr17	56883012	56883878	-	56881952	56883878	A3SS	0.5	50	50	ENSMUST00000144255.8	ENSMUSG00000042625.17	Safb2	chr17	protein_coding	scaffold attachment factor B2
chr17	56876022	56878210	-	56876022	56878257	A5SS	0.5	50	50	ENSMUST00000144255.8	ENSMUSG00000042625.17	Safb2	chr17	protein_coding	scaffold attachment factor B2
chr17	56881952	56882355	-	56881952	56883878	A5SS	0.5	50	50	ENSMUST00000144255.8	ENSMUSG00000042625.17	Safb2	chr17	protein_coding	scaffold attachment factor B2
chr17	56884905	56885641	-	56884905	56885637	A5SS	0.33	50	50	ENSMUST00000144255.8	ENSMUSG00000042625.17	Safb2	chr17	protein_coding	scaffold attachment factor B2
chr17	56884905	56885693	-	56884905	56885637	A5SS	0.33	50	50	ENSMUST00000144255.8	ENSMUSG00000042625.17	Safb2	chr17	protein_coding	scaffold attachment factor B2
chr17	56881952	56883878	-	56881952;56883012	56882355;56883878	ES	0.5	50	50	ENSMUST00000075510.12	ENSMUSG00000042625.17	Safb2	chr17	protein_coding	scaffold attachment factor B2
chr17	56884905	56885693	-	56884905	56885641	A5SS	0.33	50	50	ENSMUST00000075510.12	ENSMUSG00000042625.17	Safb2	chr17	protein_coding	scaffold attachment factor B2
chr17	56870431	56871504	-	56870431	56870512	A5SS&ES	0.5	50	50	ENSMUST00000156640.2	ENSMUSG00000042625.17	Safb2	chr17	protein_coding	scaffold attachment factor B2
chr17	56904815	56906623	+	56904815;56906220	56905644;56906623	ES	0.5	50	50	ENSMUST00000182533.8	ENSMUSG00000071054.13	Safb	chr17	protein_coding	scaffold attachment factor B
chr17	56907971	56908056	+	56907971	56908048	A3SS	0.5	50	50	ENSMUST00000182533.8	ENSMUSG00000071054.13	Safb	chr17	protein_coding	scaffold attachment factor B
chr17	56912399	56912557	+	56912399	56912551	A3SS	0.5	50	50	ENSMUST00000182533.8	ENSMUSG00000071054.13	Safb	chr17	protein_coding	scaffold attachment factor B
chr17	56904815	56905644	+	56904815	56906623	A3SS	0.5	50	50	ENSMUST00000182951.8	ENSMUSG00000071054.13	Safb	chr17	protein_coding	scaffold attachment factor B
chr17	56906220	56906623	+	56904815	56906623	A5SS	0.5	50	50	ENSMUST00000182951.8	ENSMUSG00000071054.13	Safb	chr17	protein_coding	scaffold attachment factor B
chr17	56916023;56916332	56916157;56916640	-	56916023	56916640	cassetteExon	0.5	100	100	ENSMUST00000052832.6	ENSMUSG00000049760.7	Micos13	chr17	protein_coding	mitochondrial contact site and cristae organizing system subunit 13
chr17	56915715	56915846	-	56915692	56915846	A3SS	0.5	50	50	ENSMUST00000052832.6	ENSMUSG00000049760.7	Micos13	chr17	protein_coding	mitochondrial contact site and cristae organizing system subunit 13
chr17	56916023	56916640	-	56916023	56916157	5pMXE	0.5	50	50	ENSMUST00000233103.2	ENSMUSG00000049760.7	Micos13	chr17	protein_coding	mitochondrial contact site and cristae organizing system subunit 13
chr17	56916023	56916640	-	56916332	56916640	A3SS	0.5	50	50	ENSMUST00000233299.2	ENSMUSG00000049760.7	Micos13	chr17	protein_coding	mitochondrial contact site and cristae organizing system subunit 13
chr17	56930225	56933481	-	56930225	56933366	A5SS	0.5	50	50	ENSMUST00000233732.2	ENSMUSG00000041168.11	Lonp1	chr17	protein_coding	lon peptidase 1, mitochondrial
chr17	56960756	56962097	+	56960756;56961548	56961435;56962097	ES	0.5	50	50	ENSMUST00000112979.4	ENSMUSG00000040828.11	Catsperd	chr17	protein_coding	cation channel sperm associated auxiliary subunit delta
chr17	56993061;56999721	56999521;57003602	+	56993061	57003602	cassetteExon	0.5	100	100	ENSMUST00000232975.2	ENSMUSG00000002372.10	Ranbp3	chr17	protein_coding	RAN binding protein 3
chr17	57013965;57014238	57014163;57014851	+	57013965	57014851	cassetteExon	0.5	100	100	ENSMUST00000232975.2	ENSMUSG00000002372.10	Ranbp3	chr17	protein_coding	RAN binding protein 3
chr17	56993061	56998745	+	56993061	57003602	A3SS	0.33	50	50	ENSMUST00000232975.2	ENSMUSG00000002372.10	Ranbp3	chr17	protein_coding	RAN binding protein 3
chr17	57003789	57008023	+	57003789	57009763	A3SS	0.5	50	50	ENSMUST00000232975.2	ENSMUSG00000002372.10	Ranbp3	chr17	protein_coding	RAN binding protein 3
chr17	57008541	57009763	+	57003789	57009763	A5SS	0.5	50	50	ENSMUST00000232975.2	ENSMUSG00000002372.10	Ranbp3	chr17	protein_coding	RAN binding protein 3
chr17	56993061;56998882	56998745;56999521	+	56993061	56999521	cassetteExon	0.5	100	100	ENSMUST00000233319.2	ENSMUSG00000002372.10	Ranbp3	chr17	protein_coding	RAN binding protein 3
chr17	57022817	57024598	-	57022817	57023634	5pMXE	0.33	50	50	ENSMUST00000067931.7	ENSMUSG00000054723.7	Vmac	chr17	protein_coding	vimentin-type intermediate filament associated coiled-coil protein
chr17	57022817	57024873	-	57022817	57023634	5pMXE	0.33	50	50	ENSMUST00000067931.7	ENSMUSG00000054723.7	Vmac	chr17	protein_coding	vimentin-type intermediate filament associated coiled-coil protein
chr17	57022817	57024873	-	57022817	57024598	5pMXE	0.33	50	50	ENSMUST00000164907.3	ENSMUSG00000054723.7	Vmac	chr17	protein_coding	vimentin-type intermediate filament associated coiled-coil protein
chr17	57022817;57023800	57023634;57024598	-	57022817	57024598	cassetteExon	0.5	100	100	ENSMUST00000164907.3	ENSMUSG00000054723.7	Vmac	chr17	protein_coding	vimentin-type intermediate filament associated coiled-coil protein
chr17	57028127	57028359	+	57028127	57028319	A3SS	0.5	50	50	ENSMUST00000002452.8	ENSMUSG00000002379.8	Ndufa11	chr17	protein_coding	NADH:ubiquinone oxidoreductase subunit A11
chr17	57075902	57076050	+	57075902	57076439	A3SS	0.5	50	50	ENSMUST00000233290.2	ENSMUSG00000007603.10	Dus3l	chr17	protein_coding	dihydrouridine synthase 3-like (S. cerevisiae)
chr17	57071941	57072525	+	57071840	57072525	A5SS	0.5	50	50	ENSMUST00000233290.2	ENSMUSG00000007603.10	Dus3l	chr17	protein_coding	dihydrouridine synthase 3-like (S. cerevisiae)
chr17	57112447	57137883	-	57112447;57115325	57115234;57137883	ES	0.5	50	50	ENSMUST00000086801.7	ENSMUSG00000024206.16	Rfx2	chr17	protein_coding	regulatory factor X, 2 (influences HLA class II expression)
chr17	57094760;57106324	57106250;57110478	-	57094760	57110478	cassetteExon	0.5	100	100	ENSMUST00000086801.7	ENSMUSG00000024206.16	Rfx2	chr17	protein_coding	regulatory factor X, 2 (influences HLA class II expression)
chr17	57207296	57212712	-	57207296;57209688	57209563;57212712	ES	0.5	50	50	ENSMUST00000025053.10	ENSMUSG00000024212.10	Mllt1	chr17	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 1
chr17	57203317	57203431	-	57203317	57204380	A5SS	0.5	50	50	ENSMUST00000025053.10	ENSMUSG00000024212.10	Mllt1	chr17	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 1
chr17	57212855	57213185	-	57212855	57226900	A5SS	0.5	50	50	ENSMUST00000025053.10	ENSMUSG00000024212.10	Mllt1	chr17	protein_coding	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 1
chr17	57304567;57305562	57305389;57305671	+	57304567	57305671	cassetteExon	0.5	100	100	ENSMUST00000074141.14	ENSMUSG00000002661.15	Alkbh7	chr17	protein_coding	alkB homolog 7
chr17	57330936	57331011	-	57329970	57331011	A3SS	0.5	50	50	ENSMUST00000232759.2	ENSMUSG00000007670.11	Khsrp	chr17	protein_coding	KH-type splicing regulatory protein
chr17	57329970	57330059	-	57329970	57331011	A5SS	0.5	50	50	ENSMUST00000232759.2	ENSMUSG00000007670.11	Khsrp	chr17	protein_coding	KH-type splicing regulatory protein
chr17	57346973;57348301	57348196;57348574	-	57346973	57348574	cassetteExon	0.5	100	100	ENSMUST00000058661.14	ENSMUSG00000011486.15	Slc25a41	chr17	protein_coding	solute carrier family 25, member 41
chr17	57352640	57354186	-	57352663	57354186	A3SS	0.5	50	50	ENSMUST00000040280.14	ENSMUSG00000046329.15	Slc25a23	chr17	protein_coding	solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
chr17	57359840	57360241	-	57359849	57360241	A3SS	0.5	50	50	ENSMUST00000040280.14	ENSMUSG00000046329.15	Slc25a23	chr17	protein_coding	solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
chr17	57360662	57360784	-	57360699	57360784	A3SS	0.5	50	50	ENSMUST00000040280.14	ENSMUSG00000046329.15	Slc25a23	chr17	protein_coding	solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
chr17	57360955	57362274	-	57360942	57362274	A3SS	0.5	50	50	ENSMUST00000040280.14	ENSMUSG00000046329.15	Slc25a23	chr17	protein_coding	solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
chr17	57369373	57369595	+	57369228	57369595	A5SS	0.5	50	50	ENSMUST00000071826.10	ENSMUSG00000044279.16	Crb3	chr17	protein_coding	crumbs family member 3
chr17	57370675	57372090	+	57370698	57372090	A5SS	0.5	50	50	ENSMUST00000071826.10	ENSMUSG00000044279.16	Crb3	chr17	protein_coding	crumbs family member 3
chr17	57374833;57374949	57374917;57377113	-	57374833	57377113	cassetteExon	0.5	100	100	ENSMUST00000233564.2	ENSMUSG00000002668.9	Dennd1c	chr17	protein_coding	DENN/MADD domain containing 1C
chr17	57377660	57377919	-	57377623	57377919	A3SS	0.5	50	50	ENSMUST00000233564.2	ENSMUSG00000002668.9	Dennd1c	chr17	protein_coding	DENN/MADD domain containing 1C
chr17	57379207	57379336	-	57379054	57379336	A3SS	0.5	50	50	ENSMUST00000233564.2	ENSMUSG00000002668.9	Dennd1c	chr17	protein_coding	DENN/MADD domain containing 1C
chr17	57381179	57381274	-	57381196	57381274	A3SS	0.5	50	50	ENSMUST00000233564.2	ENSMUSG00000002668.9	Dennd1c	chr17	protein_coding	DENN/MADD domain containing 1C
chr17	57382488	57383647	-	57382559	57383647	A3SS	0.5	50	50	ENSMUST00000233564.2	ENSMUSG00000002668.9	Dennd1c	chr17	protein_coding	DENN/MADD domain containing 1C
chr17	57384704	57385390	-	57384005	57385390	A3SS	0.5	50	50	ENSMUST00000233564.2	ENSMUSG00000002668.9	Dennd1c	chr17	protein_coding	DENN/MADD domain containing 1C
chr17	57373982	57374049	-	57373942	57374049	A3SS	0.5	50	50	ENSMUST00000011623.9	ENSMUSG00000002668.9	Dennd1c	chr17	protein_coding	DENN/MADD domain containing 1C
chr17	57399769;57409153	57409055;57410350	-	57399769	57410350	cassetteExon	0.5	100	100	ENSMUST00000233454.2	ENSMUSG00000079414.4	Gm11110	chr17	lncRNA	predicted gene 11110
chr17	57399769;57409518	57409055;57410350	-	57399769	57410350	cassetteExon	0.5	100	100	ENSMUST00000233454.2	ENSMUSG00000079414.4	Gm11110	chr17	lncRNA	predicted gene 11110
chr17	57399769	57407811	-	57399769	57410350	A5SS	0.33	50	50	ENSMUST00000233454.2	ENSMUSG00000079414.4	Gm11110	chr17	lncRNA	predicted gene 11110
chr17	57410484	57412421	-	57410484	57412898	A5SS	0.5	50	50	ENSMUST00000233454.2	ENSMUSG00000079414.4	Gm11110	chr17	lncRNA	predicted gene 11110
chr17	57399769;57407988	57407811;57409055	-	57399769	57409055	cassetteExon	0.5	100	100	ENSMUST00000233039.2	ENSMUSG00000079414.4	Gm11110	chr17	lncRNA	predicted gene 11110
chr17	57409153;57409518	57409422;57410350	-	57409153	57410350	cassetteExon	0.5	100	100	ENSMUST00000233039.2	ENSMUSG00000079414.4	Gm11110	chr17	lncRNA	predicted gene 11110
chr17	57525940	57526966	-	57525940	57526540	A5SS&ES	0.5	50	50	ENSMUST00000024988.15	ENSMUSG00000024164.16	C3	chr17	protein_coding	complement component 3
chr17	57553883	57555107	-	57553883	57554511	5pMXE	0.5	50	50	ENSMUST00000233568.2	ENSMUSG00000005823.10	Gpr108	chr17	protein_coding	G protein-coupled receptor 108
chr17	57550113	57551247	-	57550134	57551247	A3SS	0.5	50	50	ENSMUST00000233568.2	ENSMUSG00000005823.10	Gpr108	chr17	protein_coding	G protein-coupled receptor 108
chr17	57562467;57564027	57563860;57564235	+	57562467	57564235	cassetteExon	0.5	100	100	ENSMUST00000224947.2	ENSMUSG00000019487.12	Trip10	chr17	protein_coding	thyroid hormone receptor interactor 10
chr17	57556571	57557704	+	57556571	57557742	A3SS	0.5	50	50	ENSMUST00000224947.2	ENSMUSG00000019487.12	Trip10	chr17	protein_coding	thyroid hormone receptor interactor 10
chr17	57568788	57569357	+	57568788	57569354	A3SS	0.5	50	50	ENSMUST00000224947.2	ENSMUSG00000019487.12	Trip10	chr17	protein_coding	thyroid hormone receptor interactor 10
chr17	57562467	57564235	+	57564027	57564235	5pMXE	0.5	50	50	ENSMUST00000224261.2	ENSMUSG00000019487.12	Trip10	chr17	protein_coding	thyroid hormone receptor interactor 10
chr17	57616483	57622244	+	57616483;57618900	57618784;57622244	ES	0.33	50	50	ENSMUST00000169220.9	ENSMUSG00000034116.18	Vav1	chr17	protein_coding	vav 1 oncogene
chr17	57621580	57622244	+	57618900	57622244	A5SS	0.33	50	50	ENSMUST00000169220.9	ENSMUSG00000034116.18	Vav1	chr17	protein_coding	vav 1 oncogene
chr17	57621580	57622244	+	57616483	57622244	A5SS	0.33	50	50	ENSMUST00000112870.5	ENSMUSG00000034116.18	Vav1	chr17	protein_coding	vav 1 oncogene
chr17	57665756	57708905	+	57665756;57668734	57668672;57708905	ES	0.5	50	50	ENSMUST00000086763.13	ENSMUSG00000004730.16	Adgre1	chr17	protein_coding	adhesion G protein-coupled receptor E1
chr17	57665756	57708905	+	57665756	57668672	A3SS&ES	0.5	50	50	ENSMUST00000233376.2	ENSMUSG00000004730.16	Adgre1	chr17	protein_coding	adhesion G protein-coupled receptor E1
chr17	57668734	57708905	+	57668734	57713834	A3SS	0.5	50	50	ENSMUST00000233376.2	ENSMUSG00000004730.16	Adgre1	chr17	protein_coding	adhesion G protein-coupled receptor E1
chr17	57709861	57713834	+	57668734	57713834	A5SS	0.5	50	50	ENSMUST00000233376.2	ENSMUSG00000004730.16	Adgre1	chr17	protein_coding	adhesion G protein-coupled receptor E1
chr17	57709861	57713834	+	57709861	57717718	A3SS	0.5	50	50	ENSMUST00000233840.2	ENSMUSG00000004730.16	Adgre1	chr17	protein_coding	adhesion G protein-coupled receptor E1
chr17	57715495	57717718	+	57709861	57717718	A5SS	0.5	50	50	ENSMUST00000233840.2	ENSMUSG00000004730.16	Adgre1	chr17	protein_coding	adhesion G protein-coupled receptor E1
chr17	57816684	57829351	-	57816684;57829048	57828925;57829351	ES	0.5	50	50	ENSMUST00000234400.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57829048	57831471	-	57829048;57829578	57829351;57831471	ES	0.5	50	50	ENSMUST00000234400.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57832277	57852115	-	57832277;57832979	57832668;57852115	ES	0.5	50	50	ENSMUST00000234400.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57832349	57832668	-	57832277	57832668	A3SS	0.5	50	50	ENSMUST00000234400.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57829048	57831975	-	57829048	57829351	A5SS&ES	0.33	50	50	ENSMUST00000234400.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57829578	57831975	-	57829578	57831471	A5SS	0.5	50	50	ENSMUST00000234400.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57832277	57843078	-	57832277	57832668	A5SS&ES	0.25	50	50	ENSMUST00000234400.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57832277	57852191	-	57832277	57832668	A5SS&ES	0.25	50	50	ENSMUST00000234400.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57832979	57843078	-	57832979	57852115	A5SS	0.25	50	50	ENSMUST00000234400.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57832979	57843645	-	57832979	57852115	A5SS	0.25	50	50	ENSMUST00000234400.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57832979	57852191	-	57832979	57852115	A5SS	0.25	50	50	ENSMUST00000234400.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57832277	57852191	-	57832277;57832979	57832668;57852191	ES	0.25	50	50	ENSMUST00000234299.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57832277;57843165	57843078;57852191	-	57832277;57832979	57832668;57852191	MXE	0.5	100	100	ENSMUST00000234299.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57832979;57843165	57843078;57852191	-	57832979	57852191	cassetteExon	0.5	100	100	ENSMUST00000234299.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57832979;57843718	57843645;57852191	-	57832979	57852191	cassetteExon	0.5	100	100	ENSMUST00000234299.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57832277	57852115	-	57832277	57832668	A5SS&ES	0.25	50	50	ENSMUST00000234299.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57832277	57843078	-	57832277;57832979	57832668;57843078	ES	0.33	50	50	ENSMUST00000234878.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57832979;57843718	57843645;57852191	-	57832979;57843165	57843078;57852191	MXE	0.5	100	100	ENSMUST00000234878.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57832349	57843078	-	57832979	57843078	A3SS&ES	0.33	50	50	ENSMUST00000234878.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57832349;57843165	57843078;57852191	-	57832349;57843718	57832668;57852191	MXE	0.5	100	100	ENSMUST00000234443.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57832277	57852191	-	57843718	57852191	A3SS&ES	0.25	50	50	ENSMUST00000234443.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57832277	57852191	-	57832277;57843165	57843078;57852191	ES	0.25	50	50	ENSMUST00000234908.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57832349	57843078	-	57832277	57843078	A3SS	0.33	50	50	ENSMUST00000234908.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57843718	57852191	-	57843165	57852191	A3SS	0.25	50	50	ENSMUST00000234908.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57832277	57852115	-	57832277	57843078	A5SS&ES	0.25	50	50	ENSMUST00000234908.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57832349;57832979	57832668;57843078	-	57832349	57843078	cassetteExon	0.5	100	100	ENSMUST00000234962.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57832349;57832979	57832668;57852191	-	57832349;57843165	57843078;57852191	MXE	0.5	100	100	ENSMUST00000234962.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57832277	57852191	-	57843165	57852191	A3SS&ES	0.25	50	50	ENSMUST00000234962.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57832277	57852115	-	57832277	57852191	A5SS	0.25	50	50	ENSMUST00000234642.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57829048	57831975	-	57829048;57829578	57829351;57831975	ES	0.5	50	50	ENSMUST00000234508.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57832277;57843165	57843078;57852191	-	57832277;57843718	57832668;57852191	MXE	0.5	100	100	ENSMUST00000234508.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57829048	57831471	-	57829048	57829351	A5SS&ES	0.33	50	50	ENSMUST00000234508.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57816684;57829578	57829351;57831975	-	57816684;57829048	57828925;57831975	MXE	0.5	100	100	ENSMUST00000234476.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57829048	57831471	-	57829048	57831975	A5SS	0.33	50	50	ENSMUST00000234476.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57816684;57829578	57829351;57831471	-	57816684;57829048	57828925;57831471	MXE	0.5	100	100	ENSMUST00000234852.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57816684	57829351	-	57829048	57829351	A3SS	0.5	50	50	ENSMUST00000234679.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57829048	57831471	-	57829578	57831471	A3SS	0.5	50	50	ENSMUST00000234037.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	57816684	57829351	-	57816684	57828925	A5SS	0.5	50	50	ENSMUST00000234037.2	ENSMUSG00000090655.3	Vmn2r120	chr17	protein_coding	vomeronasal 2, receptor 120
chr17	59195160	59200273	-	59195160	59229564	A5SS	0.5	50	50	ENSMUST00000025064.14	ENSMUSG00000024227.15	Pdzph1	chr17	protein_coding	PDZ and pleckstrin homology domains 1
chr17	59303503	59316937	+	59303503	59324312	A3SS	0.5	50	50	ENSMUST00000152750.2	ENSMUSG00000086594.3	Nudt12os	chr17	lncRNA	nudix (nucleoside diphosphate linked moiety X)-type motif 12, opposite strand
chr17	62914458	62920832	-	62914458;62920391	62920311;62920832	ES	0.5	50	50	ENSMUST00000076840.12	ENSMUSG00000048915.13	Efna5	chr17	protein_coding	ephrin A5
chr17	63692047	63697385	-	63692047	63778403	A5SS	0.33	50	50	ENSMUST00000024761.13	ENSMUSG00000023965.14	Fbxl17	chr17	protein_coding	F-box and leucine-rich repeat protein 17
chr17	63692047	63758577	-	63692047	63778403	A5SS	0.33	50	50	ENSMUST00000024761.13	ENSMUSG00000023965.14	Fbxl17	chr17	protein_coding	F-box and leucine-rich repeat protein 17
chr17	63778534	63788115	-	63778534	63794707	A5SS	0.5	50	50	ENSMUST00000024761.13	ENSMUSG00000023965.14	Fbxl17	chr17	protein_coding	F-box and leucine-rich repeat protein 17
chr17	63797882	63799684	-	63797882	63806020	A5SS	0.5	50	50	ENSMUST00000024761.13	ENSMUSG00000023965.14	Fbxl17	chr17	protein_coding	F-box and leucine-rich repeat protein 17
chr17	63692047	63758577	-	63692047	63697385	A5SS&ES	0.5	50	50	ENSMUST00000112839.9	ENSMUSG00000023965.14	Fbxl17	chr17	protein_coding	F-box and leucine-rich repeat protein 17
chr17	64203278	64214276	+	64170219	64214276	A5SS	0.5	50	50	ENSMUST00000233225.2	ENSMUSG00000000127.16	Fer	chr17	protein_coding	fer (fms/fps related) protein kinase
chr17	64203278	64218460	+	64214449	64218460	A5SS&ES	0.5	50	50	ENSMUST00000233225.2	ENSMUSG00000000127.16	Fer	chr17	protein_coding	fer (fms/fps related) protein kinase
chr17	64203278	64218460	+	64203278;64214449	64214276;64218460	ES	0.5	50	50	ENSMUST00000232945.2	ENSMUSG00000000127.16	Fer	chr17	protein_coding	fer (fms/fps related) protein kinase
chr17	64248475	64248578	+	64248475	64280060	A3SS	0.5	50	50	ENSMUST00000232945.2	ENSMUSG00000000127.16	Fer	chr17	protein_coding	fer (fms/fps related) protein kinase
chr17	64280152	64288475	+	64280152	64288478	A3SS	0.5	50	50	ENSMUST00000232945.2	ENSMUSG00000000127.16	Fer	chr17	protein_coding	fer (fms/fps related) protein kinase
chr17	64185137	64203013	+	64171050	64203013	A5SS	0.5	50	50	ENSMUST00000232945.2	ENSMUSG00000000127.16	Fer	chr17	protein_coding	fer (fms/fps related) protein kinase
chr17	64245063	64248286	+	64241407	64248286	A5SS	0.5	50	50	ENSMUST00000232945.2	ENSMUSG00000000127.16	Fer	chr17	protein_coding	fer (fms/fps related) protein kinase
chr17	64264312	64280060	+	64248475	64280060	A5SS	0.5	50	50	ENSMUST00000232945.2	ENSMUSG00000000127.16	Fer	chr17	protein_coding	fer (fms/fps related) protein kinase
chr17	64600019	64615617	-	64600019;64604904	64604719;64615617	ES	0.5	50	50	ENSMUST00000172818.8	ENSMUSG00000024083.17	Pja2	chr17	protein_coding	praja ring finger ubiquitin ligase 2
chr17	64600019	64615617	-	64604904	64615617	3pMXE	0.5	50	50	ENSMUST00000232842.2	ENSMUSG00000024083.17	Pja2	chr17	protein_coding	praja ring finger ubiquitin ligase 2
chr17	64821405	64826837	-	64821405;64823350	64823129;64826837	ES	0.5	50	50	ENSMUST00000097295.10	ENSMUSG00000073377.10	AU016765	chr17	lncRNA	expressed sequence AU016765
chr17	64827041	64862399	-	64827011	64862399	A3SS	0.5	50	50	ENSMUST00000097295.10	ENSMUSG00000073377.10	AU016765	chr17	lncRNA	expressed sequence AU016765
chr17	64827041	64862399	-	64827041	64862223	A5SS	0.5	50	50	ENSMUST00000168920.6	ENSMUSG00000073377.10	AU016765	chr17	lncRNA	expressed sequence AU016765
chr17	65783770	65791372	-	65783770;65785463	65785364;65791372	ES	0.5	50	50	ENSMUST00000233328.2	ENSMUSG00000045036.16	Tmem232	chr17	protein_coding	transmembrane protein 232
chr17	65793578;65807207	65807073;65824126	-	65793578	65824126	cassetteExon	0.5	100	100	ENSMUST00000233328.2	ENSMUSG00000045036.16	Tmem232	chr17	protein_coding	transmembrane protein 232
chr17	65686357	65689417	-	65572292	65689417	A3SS	0.5	50	50	ENSMUST00000233328.2	ENSMUSG00000045036.16	Tmem232	chr17	protein_coding	transmembrane protein 232
chr17	65791526	65792859	-	65791529	65792859	A3SS	0.5	50	50	ENSMUST00000233328.2	ENSMUSG00000045036.16	Tmem232	chr17	protein_coding	transmembrane protein 232
chr17	65793578	65816970	-	65793578	65824126	A5SS	0.33	50	50	ENSMUST00000233328.2	ENSMUSG00000045036.16	Tmem232	chr17	protein_coding	transmembrane protein 232
chr17	65793578	65807073	-	65793578	65816970	A5SS	0.33	50	50	ENSMUST00000233738.2	ENSMUSG00000045036.16	Tmem232	chr17	protein_coding	transmembrane protein 232
chr17	65824232;65845426	65845342;65847705	-	65824232	65847705	cassetteExon	0.5	100	100	ENSMUST00000086722.10	ENSMUSG00000045036.16	Tmem232	chr17	protein_coding	transmembrane protein 232
chr17	65889748;65894161	65894039;65899286	-	65889748	65899286	cassetteExon	0.5	100	100	ENSMUST00000024897.10	ENSMUSG00000024091.10	Vapa	chr17	protein_coding	vesicle-associated membrane protein, associated protein A
chr17	66028600	66029003	-	66024558	66029003	A3SS	0.5	50	50	ENSMUST00000070673.9	ENSMUSG00000056515.10	Rab31	chr17	protein_coding	RAB31, member RAS oncogene family
chr17	66090663	66110206	+	66090663	66110155	A3SS	0.5	50	50	ENSMUST00000161324.8	ENSMUSG00000061950.18	Ppp4r1	chr17	protein_coding	protein phosphatase 4, regulatory subunit 1
chr17	66090014	66090619	+	66089678	66090619	A5SS	0.33	50	50	ENSMUST00000161324.8	ENSMUSG00000061950.18	Ppp4r1	chr17	protein_coding	protein phosphatase 4, regulatory subunit 1
chr17	66090444	66090619	+	66089678	66090619	A5SS	0.33	50	50	ENSMUST00000161324.8	ENSMUSG00000061950.18	Ppp4r1	chr17	protein_coding	protein phosphatase 4, regulatory subunit 1
chr17	66090444	66090619	+	66090014	66090619	A5SS	0.33	50	50	ENSMUST00000161127.8	ENSMUSG00000061950.18	Ppp4r1	chr17	protein_coding	protein phosphatase 4, regulatory subunit 1
chr17	66107148	66110206	+	66090663	66110206	A5SS	0.5	50	50	ENSMUST00000161127.8	ENSMUSG00000061950.18	Ppp4r1	chr17	protein_coding	protein phosphatase 4, regulatory subunit 1
chr17	66123045	66136370	+	66123045;66131784	66131255;66136370	ES	0.5	50	50	ENSMUST00000073104.11	ENSMUSG00000061950.18	Ppp4r1	chr17	protein_coding	protein phosphatase 4, regulatory subunit 1
chr17	66136542;66136985	66136866;66137992	+	66136542	66137992	cassetteExon	0.5	100	100	ENSMUST00000073104.11	ENSMUSG00000061950.18	Ppp4r1	chr17	protein_coding	protein phosphatase 4, regulatory subunit 1
chr17	66124022	66131255	+	66123045	66131255	A5SS	0.33	50	50	ENSMUST00000073104.11	ENSMUSG00000061950.18	Ppp4r1	chr17	protein_coding	protein phosphatase 4, regulatory subunit 1
chr17	66127392	66131255	+	66123045	66131255	A5SS	0.33	50	50	ENSMUST00000073104.11	ENSMUSG00000061950.18	Ppp4r1	chr17	protein_coding	protein phosphatase 4, regulatory subunit 1
chr17	66123045	66131255	+	66123045	66136370	A3SS	0.5	50	50	ENSMUST00000162109.8	ENSMUSG00000061950.18	Ppp4r1	chr17	protein_coding	protein phosphatase 4, regulatory subunit 1
chr17	66131784	66136370	+	66123045	66136370	A5SS	0.5	50	50	ENSMUST00000162109.8	ENSMUSG00000061950.18	Ppp4r1	chr17	protein_coding	protein phosphatase 4, regulatory subunit 1
chr17	66127392	66131255	+	66124022	66131255	A5SS	0.33	50	50	ENSMUST00000161100.8	ENSMUSG00000061950.18	Ppp4r1	chr17	protein_coding	protein phosphatase 4, regulatory subunit 1
chr17	66161194	66165968	-	66161194;66164788	66164657;66165968	ES	0.5	50	50	ENSMUST00000024905.11	ENSMUSG00000024096.18	Ralbp1	chr17	protein_coding	ralA binding protein 1
chr17	66164788	66168251	-	66164788;66166129	66165968;66168251	ES	0.5	50	50	ENSMUST00000024905.11	ENSMUSG00000024096.18	Ralbp1	chr17	protein_coding	ralA binding protein 1
chr17	66174825	66192181	-	66174825	66191673	5pMXE	0.2	50	50	ENSMUST00000024905.11	ENSMUSG00000024096.18	Ralbp1	chr17	protein_coding	ralA binding protein 1
chr17	66174825	66174944	-	66174825	66191673	A5SS	0.2	50	50	ENSMUST00000024905.11	ENSMUSG00000024096.18	Ralbp1	chr17	protein_coding	ralA binding protein 1
chr17	66174825	66190855	-	66174825	66191673	A5SS	0.2	50	50	ENSMUST00000024905.11	ENSMUSG00000024096.18	Ralbp1	chr17	protein_coding	ralA binding protein 1
chr17	66174825	66191217	-	66174825	66191673	A5SS	0.2	50	50	ENSMUST00000024905.11	ENSMUSG00000024096.18	Ralbp1	chr17	protein_coding	ralA binding protein 1
chr17	66174825	66174944	-	66174825	66192181	A5SS	0.2	50	50	ENSMUST00000166543.10	ENSMUSG00000024096.18	Ralbp1	chr17	protein_coding	ralA binding protein 1
chr17	66174825	66190855	-	66174825	66192181	A5SS	0.2	50	50	ENSMUST00000166543.10	ENSMUSG00000024096.18	Ralbp1	chr17	protein_coding	ralA binding protein 1
chr17	66174825	66191217	-	66174825	66192181	A5SS	0.2	50	50	ENSMUST00000166543.10	ENSMUSG00000024096.18	Ralbp1	chr17	protein_coding	ralA binding protein 1
chr17	66161194;66166129	66165968;66168251	-	66161194;66164788	66164657;66168251	MXE	0.5	100	100	ENSMUST00000233054.2	ENSMUSG00000024096.18	Ralbp1	chr17	protein_coding	ralA binding protein 1
chr17	66174825	66190855	-	66174825	66174944	5pMXE	0.2	50	50	ENSMUST00000233399.2	ENSMUSG00000024096.18	Ralbp1	chr17	protein_coding	ralA binding protein 1
chr17	66174825	66191217	-	66174825	66174944	5pMXE	0.2	50	50	ENSMUST00000233399.2	ENSMUSG00000024096.18	Ralbp1	chr17	protein_coding	ralA binding protein 1
chr17	66174825	66191217	-	66174825	66190855	5pMXE	0.2	50	50	ENSMUST00000232885.2	ENSMUSG00000024096.18	Ralbp1	chr17	protein_coding	ralA binding protein 1
chr17	66193025	66193678	+	66192906	66193678	A5SS	0.5	50	50	ENSMUST00000232741.2	ENSMUSG00000117335.2	Gm49870	chr17	lncRNA	predicted gene, 49870
chr17	66220632	66221056	+	66214561	66221056	A5SS	0.5	50	50	ENSMUST00000232714.2	ENSMUSG00000117229.2	Gm35550	chr17	lncRNA	predicted gene, 35550
chr17	66212748	66214319	+	66212748	66223095	A3SS	0.5	50	50	ENSMUST00000233592.2	ENSMUSG00000117229.2	Gm35550	chr17	lncRNA	predicted gene, 35550
chr17	66221179	66223095	+	66212748	66223095	A5SS	0.5	50	50	ENSMUST00000233592.2	ENSMUSG00000117229.2	Gm35550	chr17	lncRNA	predicted gene, 35550
chr17	66236808	66255653	-	66236808;66244895	66244796;66255653	ES	0.5	50	50	ENSMUST00000233580.2	ENSMUSG00000024098.7	Twsg1	chr17	protein_coding	twisted gastrulation BMP signaling modulator 1
chr17	66233153	66233252	-	66230033	66233252	A3SS	0.5	50	50	ENSMUST00000233580.2	ENSMUSG00000024098.7	Twsg1	chr17	protein_coding	twisted gastrulation BMP signaling modulator 1
chr17	66344634	66356781	-	66344634;66349596	66349528;66356781	ES	0.5	50	50	ENSMUST00000038116.13	ENSMUSG00000034647.16	Ankrd12	chr17	protein_coding	ankyrin repeat domain 12
chr17	66277332;66278698	66278522;66279292	-	66277332	66279292	cassetteExon	0.5	100	100	ENSMUST00000038116.13	ENSMUSG00000034647.16	Ankrd12	chr17	protein_coding	ankyrin repeat domain 12
chr17	66356928;66357830	66357621;66359949	-	66356928	66359949	cassetteExon	0.5	100	100	ENSMUST00000038116.13	ENSMUSG00000034647.16	Ankrd12	chr17	protein_coding	ankyrin repeat domain 12
chr17	66356928	66357091	-	66356928	66359949	A5SS	0.33	50	50	ENSMUST00000038116.13	ENSMUSG00000034647.16	Ankrd12	chr17	protein_coding	ankyrin repeat domain 12
chr17	66360086	66383386	-	66360086	66383879	A5SS	0.5	50	50	ENSMUST00000038116.13	ENSMUSG00000034647.16	Ankrd12	chr17	protein_coding	ankyrin repeat domain 12
chr17	66356928	66357091	-	66356928	66357621	A5SS	0.33	50	50	ENSMUST00000233407.2	ENSMUSG00000034647.16	Ankrd12	chr17	protein_coding	ankyrin repeat domain 12
chr17	66398924;66399721	66399653;66408410	-	66398924	66408410	cassetteExon	0.5	100	100	ENSMUST00000143987.9	ENSMUSG00000024099.16	Ndufv2	chr17	protein_coding	NADH:ubiquinone oxidoreductase core subunit V2
chr17	66398924;66408069	66407973;66408410	-	66398924	66408410	cassetteExon	0.5	100	100	ENSMUST00000143987.9	ENSMUSG00000024099.16	Ndufv2	chr17	protein_coding	NADH:ubiquinone oxidoreductase core subunit V2
chr17	66398924;66399721	66399653;66408410	-	66398924;66408069	66407973;66408410	MXE	0.5	100	100	ENSMUST00000024909.15	ENSMUSG00000024099.16	Ndufv2	chr17	protein_coding	NADH:ubiquinone oxidoreductase core subunit V2
chr17	66423095	66423624	+	66423095;66423391	66423255;66423624	ES	0.5	50	50	ENSMUST00000072383.14	ENSMUSG00000024101.16	Washc1	chr17	protein_coding	WASH complex subunit 1
chr17	66418726	66420858	+	66418644	66420858	A5SS	0.33	50	50	ENSMUST00000072383.14	ENSMUSG00000024101.16	Washc1	chr17	protein_coding	WASH complex subunit 1
chr17	66418896	66420858	+	66418644	66420858	A5SS	0.33	50	50	ENSMUST00000072383.14	ENSMUSG00000024101.16	Washc1	chr17	protein_coding	WASH complex subunit 1
chr17	66418896	66420858	+	66418726	66420858	A5SS	0.33	50	50	ENSMUST00000116556.4	ENSMUSG00000024101.16	Washc1	chr17	protein_coding	WASH complex subunit 1
chr17	66423095	66423624	+	66423391	66423624	A5SS	0.5	50	50	ENSMUST00000233060.2	ENSMUSG00000024101.16	Washc1	chr17	protein_coding	WASH complex subunit 1
chr17	66437541	66437675	+	66437463	66437675	A5SS	0.5	50	50	ENSMUST00000225956.2	ENSMUSG00000035842.11	Ddx11	chr17	protein_coding	DEAD/H box helicase 11
chr17	66443489	66445086	+	66443489	66445082	A3SS	0.5	50	50	ENSMUST00000163605.3	ENSMUSG00000035842.11	Ddx11	chr17	protein_coding	DEAD/H box helicase 11
chr17	66450541	66450614	+	66450541	66450645	A3SS	0.5	50	50	ENSMUST00000163605.3	ENSMUSG00000035842.11	Ddx11	chr17	protein_coding	DEAD/H box helicase 11
chr17	66539222	66541643	-	66539222;66539991	66539803;66541643	ES	0.5	50	50	ENSMUST00000233985.2	ENSMUSG00000117220.2	Gm49932	chr17	lncRNA	predicted gene, 49932
chr17	66645149;66647535	66647479;66649821	-	66645149	66649821	cassetteExon	0.5	100	100	ENSMUST00000086693.12	ENSMUSG00000052105.18	Mtcl1	chr17	protein_coding	microtubule crosslinking factor 1
chr17	66675455;66678440	66678318;66684848	-	66675455	66684848	cassetteExon	0.5	100	100	ENSMUST00000086693.12	ENSMUSG00000052105.18	Mtcl1	chr17	protein_coding	microtubule crosslinking factor 1
chr17	66687431;66691369	66691295;66692855	-	66687431	66692855	cassetteExon	0.5	100	100	ENSMUST00000086693.12	ENSMUSG00000052105.18	Mtcl1	chr17	protein_coding	microtubule crosslinking factor 1
chr17	66653380	66655214	-	66653380	66655238	A5SS	0.5	50	50	ENSMUST00000086693.12	ENSMUSG00000052105.18	Mtcl1	chr17	protein_coding	microtubule crosslinking factor 1
chr17	66673536	66675289	-	66673536	66675225	A5SS	0.5	50	50	ENSMUST00000086693.12	ENSMUSG00000052105.18	Mtcl1	chr17	protein_coding	microtubule crosslinking factor 1
chr17	66685006	66685365	-	66685006	66686124	A5SS	0.5	50	50	ENSMUST00000086693.12	ENSMUSG00000052105.18	Mtcl1	chr17	protein_coding	microtubule crosslinking factor 1
chr17	66745386	66745882	-	66745386	66755312	A5SS	0.5	50	50	ENSMUST00000086693.12	ENSMUSG00000052105.18	Mtcl1	chr17	protein_coding	microtubule crosslinking factor 1
chr17	66678440	66681527	-	66678440	66684848	A5SS	0.5	50	50	ENSMUST00000177034.2	ENSMUSG00000052105.18	Mtcl1	chr17	protein_coding	microtubule crosslinking factor 1
chr17	66807443;66812173	66811984;66813028	-	66807443	66813028	cassetteExon	0.5	100	100	ENSMUST00000167962.2	ENSMUSG00000023460.14	Rab12	chr17	protein_coding	RAB12, member RAS oncogene family
chr17	67116648	67121462	-	67116648;67121292	67121266;67121462	ES	0.5	50	50	ENSMUST00000037974.10	ENSMUSG00000033278.11	Ptprm	chr17	protein_coding	protein tyrosine phosphatase, receptor type, M
chr17	67198051	67226019	-	67198051;67219422	67219348;67226019	ES	0.5	50	50	ENSMUST00000037974.10	ENSMUSG00000033278.11	Ptprm	chr17	protein_coding	protein tyrosine phosphatase, receptor type, M
chr17	67124972;67179186	67179112;67197919	-	67124972	67197919	cassetteExon	0.5	100	100	ENSMUST00000037974.10	ENSMUSG00000033278.11	Ptprm	chr17	protein_coding	protein tyrosine phosphatase, receptor type, M
chr17	66990050	66990366	-	66985131	66990366	A3SS	0.5	50	50	ENSMUST00000037974.10	ENSMUSG00000033278.11	Ptprm	chr17	protein_coding	protein tyrosine phosphatase, receptor type, M
chr17	67068536	67069124	-	67054172	67069124	A3SS	0.5	50	50	ENSMUST00000037974.10	ENSMUSG00000033278.11	Ptprm	chr17	protein_coding	protein tyrosine phosphatase, receptor type, M
chr17	67120570	67121266	-	67116648	67121266	A3SS	0.5	50	50	ENSMUST00000037974.10	ENSMUSG00000033278.11	Ptprm	chr17	protein_coding	protein tyrosine phosphatase, receptor type, M
chr17	67116648	67117364	-	67116648	67121266	A5SS	0.33	50	50	ENSMUST00000037974.10	ENSMUSG00000033278.11	Ptprm	chr17	protein_coding	protein tyrosine phosphatase, receptor type, M
chr17	67353153	67354824	-	67353153	67370037	A5SS	0.5	50	50	ENSMUST00000037974.10	ENSMUSG00000033278.11	Ptprm	chr17	protein_coding	protein tyrosine phosphatase, receptor type, M
chr17	67116648	67117364	-	67116648	67121462	A5SS	0.33	50	50	ENSMUST00000223982.2	ENSMUSG00000033278.11	Ptprm	chr17	protein_coding	protein tyrosine phosphatase, receptor type, M
chr17	68123039	68123152	+	68123039	68123998	A3SS	0.5	50	50	ENSMUST00000035471.9	ENSMUSG00000032796.9	Lama1	chr17	protein_coding	laminin, alpha 1
chr17	68182653	68191714	-	68182653;68188520	68188431;68191714	ES	0.5	50	50	ENSMUST00000024840.12	ENSMUSG00000024043.14	Arhgap28	chr17	protein_coding	Rho GTPase activating protein 28
chr17	68165245	68168268	-	68165346	68168268	A3SS	0.5	50	50	ENSMUST00000024840.12	ENSMUSG00000024043.14	Arhgap28	chr17	protein_coding	Rho GTPase activating protein 28
chr17	68171617	68175946	-	68171620	68175946	A3SS	0.5	50	50	ENSMUST00000024840.12	ENSMUSG00000024043.14	Arhgap28	chr17	protein_coding	Rho GTPase activating protein 28
chr17	68208500	68257881	-	68208500	68310890	A5SS	0.5	50	50	ENSMUST00000024840.12	ENSMUSG00000024043.14	Arhgap28	chr17	protein_coding	Rho GTPase activating protein 28
chr17	68770015;68791793	68791708;68793868	+	68770015	68793868	cassetteExon	0.5	100	100	ENSMUST00000139383.8	ENSMUSG00000041565.18	L3mbtl4	chr17	protein_coding	L3MBTL4 histone methyl-lysine binding protein
chr17	68866858;68894194	68894092;68937180	+	68866858	68937180	cassetteExon	0.5	100	100	ENSMUST00000139383.8	ENSMUSG00000041565.18	L3mbtl4	chr17	protein_coding	L3MBTL4 histone methyl-lysine binding protein
chr17	69144528	69147319	+	69133809	69147319	A5SS	0.5	50	50	ENSMUST00000233019.2	ENSMUSG00000095407.3	Tmem200c	chr17	protein_coding	transmembrane protein 200C
chr17	69577659	69581699	+	69577659;69580912	69580877;69581699	ES	0.25	50	50	ENSMUST00000239167.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69581890	69591534	+	69581890;69591002	69590880;69591534	ES	0.2	50	50	ENSMUST00000239167.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69594332	69595846	+	69594332;69594723	69594607;69595846	ES	0.5	50	50	ENSMUST00000239167.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69577659;69581161	69581096;69581699	+	69577659;69580912	69580877;69581699	MXE	0.5	100	100	ENSMUST00000239167.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69581890;69588102	69588028;69590880	+	69581890	69590880	cassetteExon	0.5	100	100	ENSMUST00000239167.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69581890;69588102	69588028;69591534	+	69581890;69591002	69590880;69591534	MXE	0.5	100	100	ENSMUST00000239167.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69554749	69555627	+	69554749	69555625	A3SS	0.5	50	50	ENSMUST00000239167.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69566183	69569175	+	69566183	69569121	A3SS	0.5	50	50	ENSMUST00000239167.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69569341	69572900	+	69569341	69577606	A3SS	0.33	50	50	ENSMUST00000239167.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69463905	69514854	+	69434740	69514854	A5SS	0.5	50	50	ENSMUST00000239167.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69573427	69577606	+	69569341	69577606	A5SS	0.5	50	50	ENSMUST00000239167.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69589909	69591534	+	69591002	69591534	A5SS&ES	0.2	50	50	ENSMUST00000239167.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69590275	69590880	+	69581890	69590880	A5SS	0.33	50	50	ENSMUST00000239167.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69569341	69581699	+	69569341;69577659	69577606;69581699	ES	0.25	50	50	ENSMUST00000225740.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69577659	69591534	+	69577659;69581890	69581699;69591534	ES	0.2	50	50	ENSMUST00000225740.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69577659;69581161	69580877;69581699	+	69577659	69581699	cassetteExon	0.5	100	100	ENSMUST00000225740.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69577659;69581161	69581096;69581699	+	69577659	69581699	cassetteExon	0.5	100	100	ENSMUST00000225740.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69581890;69588102	69588028;69591534	+	69581890	69591534	cassetteExon	0.5	100	100	ENSMUST00000225740.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69589909	69591534	+	69581890	69591534	A5SS	0.2	50	50	ENSMUST00000225740.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69569341	69581699	+	69569341	69577606	3pMXE	0.33	50	50	ENSMUST00000225316.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69588102	69590880	+	69588102;69590275	69589556;69590880	ES	0.33	50	50	ENSMUST00000238898.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69545444	69546742	+	69545444	69560391	A3SS	0.5	50	50	ENSMUST00000238898.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69555712	69560391	+	69545444	69560391	A5SS	0.5	50	50	ENSMUST00000238898.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69594332	69595846	+	69594332	69594607	3pMXE	0.5	50	50	ENSMUST00000233509.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69569341;69581890	69581699;69591534	+	69569341;69577659	69577606;69591534	MXE	0.5	100	100	ENSMUST00000232706.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69577659	69580877	+	69577659	69591534	A3SS	0.25	50	50	ENSMUST00000232706.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69577659	69581096	+	69577659	69591534	A3SS	0.25	50	50	ENSMUST00000232706.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69588102	69591534	+	69577659	69591534	A5SS	0.2	50	50	ENSMUST00000232706.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69589909	69591534	+	69577659	69591534	A5SS	0.2	50	50	ENSMUST00000232706.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69591002	69591534	+	69577659	69591534	A5SS	0.2	50	50	ENSMUST00000232706.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69569341	69577606	+	69569341;69573427	69572900;69577606	ES	0.5	50	50	ENSMUST00000223703.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69588102;69589909	69589556;69591534	+	69588102	69591534	cassetteExon	0.5	100	100	ENSMUST00000224523.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69588102;69591002	69590880;69591534	+	69588102	69591534	cassetteExon	0.5	100	100	ENSMUST00000224523.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69569341	69572900	+	69569341	69581699	A3SS	0.33	50	50	ENSMUST00000224951.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69580912	69581699	+	69569341	69581699	A5SS	0.25	50	50	ENSMUST00000224951.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69581161	69581699	+	69569341	69581699	A5SS	0.25	50	50	ENSMUST00000224951.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69581890	69590880	+	69581890	69588028	3pMXE	0.33	50	50	ENSMUST00000223816.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69581890	69591534	+	69581890	69588028	3pMXE	0.33	50	50	ENSMUST00000223816.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69588102;69589909	69589556;69591534	+	69588102;69591002	69590880;69591534	MXE	0.5	100	100	ENSMUST00000225695.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69590275	69590880	+	69588102	69590880	A5SS	0.33	50	50	ENSMUST00000225695.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69588102	69591534	+	69589909	69591534	5pMXE	0.2	50	50	ENSMUST00000223565.2	ENSMUSG00000024044.20	Epb41l3	chr17	protein_coding	erythrocyte membrane protein band 4.1 like 3
chr17	69690415	69692416	+	69690264	69692416	A5SS	0.33	50	50	ENSMUST00000112674.8	ENSMUSG00000049672.16	Zbtb14	chr17	protein_coding	zinc finger and BTB domain containing 14
chr17	69691220	69692416	+	69690264	69692416	A5SS	0.33	50	50	ENSMUST00000112674.8	ENSMUSG00000049672.16	Zbtb14	chr17	protein_coding	zinc finger and BTB domain containing 14
chr17	69691220	69692416	+	69690415	69692416	A5SS	0.33	50	50	ENSMUST00000062369.14	ENSMUSG00000049672.16	Zbtb14	chr17	protein_coding	zinc finger and BTB domain containing 14
chr17	69747152	69794149	+	69746536	69794149	A5SS	0.5	50	50	ENSMUST00000169935.2	ENSMUSG00000091636.3	Akain1	chr17	protein_coding	A kinase (PRKA) anchor inhibitor 1
chr17	70385418;70513340	70513232;70615042	+	70385418	70615042	cassetteExon	0.5	100	100	ENSMUST00000133983.8	ENSMUSG00000003279.18	Dlgap1	chr17	protein_coding	DLG associated protein 1
chr17	70969804;71025220	71025191;71068070	+	70969804	71068070	cassetteExon	0.5	100	100	ENSMUST00000133983.8	ENSMUSG00000003279.18	Dlgap1	chr17	protein_coding	DLG associated protein 1
chr17	70969804	71068154	+	70969804	71068070	A3SS	0.33	50	50	ENSMUST00000133983.8	ENSMUSG00000003279.18	Dlgap1	chr17	protein_coding	DLG associated protein 1
chr17	70828795	70900162	+	70823991	70900162	A5SS	0.2	50	50	ENSMUST00000133983.8	ENSMUSG00000003279.18	Dlgap1	chr17	protein_coding	DLG associated protein 1
chr17	70829257	70900162	+	70823991	70900162	A5SS	0.2	50	50	ENSMUST00000133983.8	ENSMUSG00000003279.18	Dlgap1	chr17	protein_coding	DLG associated protein 1
chr17	70829263	70900162	+	70823991	70900162	A5SS	0.2	50	50	ENSMUST00000133983.8	ENSMUSG00000003279.18	Dlgap1	chr17	protein_coding	DLG associated protein 1
chr17	70829263	70964449	+	70900376	70964449	A5SS&ES	0.5	50	50	ENSMUST00000133983.8	ENSMUSG00000003279.18	Dlgap1	chr17	protein_coding	DLG associated protein 1
chr17	70868866	70900162	+	70823991	70900162	A5SS	0.2	50	50	ENSMUST00000133983.8	ENSMUSG00000003279.18	Dlgap1	chr17	protein_coding	DLG associated protein 1
chr17	70969804	71068154	+	70969804	71025191	A3SS&ES	0.33	50	50	ENSMUST00000146730.9	ENSMUSG00000003279.18	Dlgap1	chr17	protein_coding	DLG associated protein 1
chr17	71025220	71068154	+	71025220	71068070	A3SS	0.5	50	50	ENSMUST00000146730.9	ENSMUSG00000003279.18	Dlgap1	chr17	protein_coding	DLG associated protein 1
chr17	70969804	71068154	+	70969804;71025220	71025191;71068154	ES	0.5	50	50	ENSMUST00000135938.8	ENSMUSG00000003279.18	Dlgap1	chr17	protein_coding	DLG associated protein 1
chr17	70969804	71068070	+	70969804	71025191	A3SS&ES	0.33	50	50	ENSMUST00000135938.8	ENSMUSG00000003279.18	Dlgap1	chr17	protein_coding	DLG associated protein 1
chr17	70829257	70900162	+	70828795	70900162	A5SS	0.2	50	50	ENSMUST00000233283.2	ENSMUSG00000003279.18	Dlgap1	chr17	protein_coding	DLG associated protein 1
chr17	70829263	70900162	+	70828795	70900162	A5SS	0.2	50	50	ENSMUST00000233283.2	ENSMUSG00000003279.18	Dlgap1	chr17	protein_coding	DLG associated protein 1
chr17	70868866	70900162	+	70828795	70900162	A5SS	0.2	50	50	ENSMUST00000233283.2	ENSMUSG00000003279.18	Dlgap1	chr17	protein_coding	DLG associated protein 1
chr17	70829263	70964449	+	70829263;70900376	70900162;70964449	ES	0.5	50	50	ENSMUST00000133717.9	ENSMUSG00000003279.18	Dlgap1	chr17	protein_coding	DLG associated protein 1
chr17	70829257	70900162	+	70829263	70900162	A5SS	0.2	50	50	ENSMUST00000133717.9	ENSMUSG00000003279.18	Dlgap1	chr17	protein_coding	DLG associated protein 1
chr17	70868866	70900162	+	70829263	70900162	A5SS	0.2	50	50	ENSMUST00000133717.9	ENSMUSG00000003279.18	Dlgap1	chr17	protein_coding	DLG associated protein 1
chr17	70868866	70900162	+	70829257	70900162	A5SS	0.2	50	50	ENSMUST00000156946.2	ENSMUSG00000003279.18	Dlgap1	chr17	protein_coding	DLG associated protein 1
chr17	71153393	71157867	-	71153393	71156635	5pMXE	0.16	50	50	ENSMUST00000172229.8	ENSMUSG00000047407.18	Tgif1	chr17	protein_coding	TGFB-induced factor homeobox 1
chr17	71153393	71158305	-	71153393	71156635	5pMXE	0.16	50	50	ENSMUST00000172229.8	ENSMUSG00000047407.18	Tgif1	chr17	protein_coding	TGFB-induced factor homeobox 1
chr17	71153393	71160443	-	71153393	71156635	5pMXE	0.16	50	50	ENSMUST00000172229.8	ENSMUSG00000047407.18	Tgif1	chr17	protein_coding	TGFB-induced factor homeobox 1
chr17	71152235	71153167	-	71152267	71153167	A3SS	0.33	50	50	ENSMUST00000172229.8	ENSMUSG00000047407.18	Tgif1	chr17	protein_coding	TGFB-induced factor homeobox 1
chr17	71152321	71153167	-	71152267	71153167	A3SS	0.33	50	50	ENSMUST00000172229.8	ENSMUSG00000047407.18	Tgif1	chr17	protein_coding	TGFB-induced factor homeobox 1
chr17	71153393	71156179	-	71153393	71156635	A5SS	0.16	50	50	ENSMUST00000172229.8	ENSMUSG00000047407.18	Tgif1	chr17	protein_coding	TGFB-induced factor homeobox 1
chr17	71153393	71156642	-	71153393	71156635	A5SS	0.16	50	50	ENSMUST00000172229.8	ENSMUSG00000047407.18	Tgif1	chr17	protein_coding	TGFB-induced factor homeobox 1
chr17	71153393	71158305	-	71153393	71157867	5pMXE	0.16	50	50	ENSMUST00000059775.15	ENSMUSG00000047407.18	Tgif1	chr17	protein_coding	TGFB-induced factor homeobox 1
chr17	71153393	71160443	-	71153393	71157867	5pMXE	0.16	50	50	ENSMUST00000059775.15	ENSMUSG00000047407.18	Tgif1	chr17	protein_coding	TGFB-induced factor homeobox 1
chr17	71153393;71156799	71156635;71157867	-	71153393	71157867	cassetteExon	0.5	100	100	ENSMUST00000059775.15	ENSMUSG00000047407.18	Tgif1	chr17	protein_coding	TGFB-induced factor homeobox 1
chr17	71153393;71156799	71156642;71157867	-	71153393	71157867	cassetteExon	0.5	100	100	ENSMUST00000059775.15	ENSMUSG00000047407.18	Tgif1	chr17	protein_coding	TGFB-induced factor homeobox 1
chr17	71153393	71156179	-	71153393	71157867	A5SS	0.16	50	50	ENSMUST00000059775.15	ENSMUSG00000047407.18	Tgif1	chr17	protein_coding	TGFB-induced factor homeobox 1
chr17	71152321	71153167	-	71152235	71153167	A3SS	0.33	50	50	ENSMUST00000186358.6	ENSMUSG00000047407.18	Tgif1	chr17	protein_coding	TGFB-induced factor homeobox 1
chr17	71153393	71160443	-	71153393	71158305	5pMXE	0.16	50	50	ENSMUST00000166395.9	ENSMUSG00000047407.18	Tgif1	chr17	protein_coding	TGFB-induced factor homeobox 1
chr17	71153393	71156179	-	71153393	71158305	A5SS	0.16	50	50	ENSMUST00000166395.9	ENSMUSG00000047407.18	Tgif1	chr17	protein_coding	TGFB-induced factor homeobox 1
chr17	71153393	71156642	-	71153393	71158305	A5SS	0.16	50	50	ENSMUST00000166395.9	ENSMUSG00000047407.18	Tgif1	chr17	protein_coding	TGFB-induced factor homeobox 1
chr17	71153393	71156179	-	71153393	71160443	A5SS	0.16	50	50	ENSMUST00000118283.8	ENSMUSG00000047407.18	Tgif1	chr17	protein_coding	TGFB-induced factor homeobox 1
chr17	71153393	71156642	-	71153393	71160443	A5SS	0.16	50	50	ENSMUST00000118283.8	ENSMUSG00000047407.18	Tgif1	chr17	protein_coding	TGFB-induced factor homeobox 1
chr17	71153393	71156642	-	71153393	71156179	5pMXE	0.16	50	50	ENSMUST00000134654.2	ENSMUSG00000047407.18	Tgif1	chr17	protein_coding	TGFB-induced factor homeobox 1
chr17	71155516	71156179	-	71153393	71156179	A3SS	0.5	50	50	ENSMUST00000134654.2	ENSMUSG00000047407.18	Tgif1	chr17	protein_coding	TGFB-induced factor homeobox 1
chr17	71284241	71309103	-	71284241	71297468	5pMXE	0.33	50	50	ENSMUST00000038446.10	ENSMUSG00000034868.10	Myl12b	chr17	protein_coding	myosin, light chain 12B, regulatory
chr17	71284241	71285359	-	71284241	71297468	A5SS	0.33	50	50	ENSMUST00000038446.10	ENSMUSG00000034868.10	Myl12b	chr17	protein_coding	myosin, light chain 12B, regulatory
chr17	71284241	71309103	-	71284241	71285359	5pMXE	0.33	50	50	ENSMUST00000233004.2	ENSMUSG00000034868.10	Myl12b	chr17	protein_coding	myosin, light chain 12B, regulatory
chr17	71281491	71303105	-	71281491	71282454	5pMXE	0.5	50	50	ENSMUST00000137537.2	ENSMUSG00000034868.10	Myl12b	chr17	protein_coding	myosin, light chain 12B, regulatory
chr17	71303890	71309103	-	71284241	71309103	A3SS	0.33	50	50	ENSMUST00000233357.2	ENSMUSG00000117098.2	Gm49909	chr17	protein_coding	predicted gene, 49909
chr17	71307229	71309103	-	71284241	71309103	A3SS	0.33	50	50	ENSMUST00000233357.2	ENSMUSG00000117098.2	Gm49909	chr17	protein_coding	predicted gene, 49909
chr17	71303890	71309667	-	71303890	71309103	5pMXE	0.12	50	50	ENSMUST00000233417.2	ENSMUSG00000117098.2	Gm49909	chr17	protein_coding	predicted gene, 49909
chr17	71303890;71307229	71306984;71309103	-	71303890	71309103	cassetteExon	0.5	100	100	ENSMUST00000233417.2	ENSMUSG00000117098.2	Gm49909	chr17	protein_coding	predicted gene, 49909
chr17	71301779	71303105	-	71281491	71303105	A3SS	0.5	50	50	ENSMUST00000233417.2	ENSMUSG00000117098.2	Gm49909	chr17	protein_coding	predicted gene, 49909
chr17	71303890	71304215	-	71303890	71309103	A5SS	0.12	50	50	ENSMUST00000233417.2	ENSMUSG00000117098.2	Gm49909	chr17	protein_coding	predicted gene, 49909
chr17	71303890	71304880	-	71303890	71309103	A5SS	0.12	50	50	ENSMUST00000233417.2	ENSMUSG00000117098.2	Gm49909	chr17	protein_coding	predicted gene, 49909
chr17	71303890	71305026	-	71303890	71309103	A5SS	0.12	50	50	ENSMUST00000233417.2	ENSMUSG00000117098.2	Gm49909	chr17	protein_coding	predicted gene, 49909
chr17	71303890	71305512	-	71303890	71309103	A5SS	0.12	50	50	ENSMUST00000233417.2	ENSMUSG00000117098.2	Gm49909	chr17	protein_coding	predicted gene, 49909
chr17	71303890	71308755	-	71303890	71309103	A5SS	0.12	50	50	ENSMUST00000233417.2	ENSMUSG00000117098.2	Gm49909	chr17	protein_coding	predicted gene, 49909
chr17	71303890	71304880	-	71303890	71304215	5pMXE	0.12	50	50	ENSMUST00000233089.2	ENSMUSG00000024048.16	Myl12a	chr17	protein_coding	myosin, light chain 12A, regulatory, non-sarcomeric
chr17	71303890	71305026	-	71303890	71304215	5pMXE	0.12	50	50	ENSMUST00000233089.2	ENSMUSG00000024048.16	Myl12a	chr17	protein_coding	myosin, light chain 12A, regulatory, non-sarcomeric
chr17	71303890	71305512	-	71303890	71304215	5pMXE	0.12	50	50	ENSMUST00000233089.2	ENSMUSG00000024048.16	Myl12a	chr17	protein_coding	myosin, light chain 12A, regulatory, non-sarcomeric
chr17	71303890	71306984	-	71303890	71304215	5pMXE	0.12	50	50	ENSMUST00000233089.2	ENSMUSG00000024048.16	Myl12a	chr17	protein_coding	myosin, light chain 12A, regulatory, non-sarcomeric
chr17	71303890	71308755	-	71303890	71304215	5pMXE	0.12	50	50	ENSMUST00000233089.2	ENSMUSG00000024048.16	Myl12a	chr17	protein_coding	myosin, light chain 12A, regulatory, non-sarcomeric
chr17	71303890	71309667	-	71303890	71304215	5pMXE	0.12	50	50	ENSMUST00000233089.2	ENSMUSG00000024048.16	Myl12a	chr17	protein_coding	myosin, light chain 12A, regulatory, non-sarcomeric
chr17	71303890	71305512	-	71303890	71305026	5pMXE	0.12	50	50	ENSMUST00000232766.2	ENSMUSG00000024048.16	Myl12a	chr17	protein_coding	myosin, light chain 12A, regulatory, non-sarcomeric
chr17	71303890	71306984	-	71303890	71305026	5pMXE	0.12	50	50	ENSMUST00000232766.2	ENSMUSG00000024048.16	Myl12a	chr17	protein_coding	myosin, light chain 12A, regulatory, non-sarcomeric
chr17	71303890	71308755	-	71303890	71305026	5pMXE	0.12	50	50	ENSMUST00000232766.2	ENSMUSG00000024048.16	Myl12a	chr17	protein_coding	myosin, light chain 12A, regulatory, non-sarcomeric
chr17	71303890	71309667	-	71303890	71305026	5pMXE	0.12	50	50	ENSMUST00000232766.2	ENSMUSG00000024048.16	Myl12a	chr17	protein_coding	myosin, light chain 12A, regulatory, non-sarcomeric
chr17	71303890	71304880	-	71303890	71305026	A5SS	0.12	50	50	ENSMUST00000232766.2	ENSMUSG00000024048.16	Myl12a	chr17	protein_coding	myosin, light chain 12A, regulatory, non-sarcomeric
chr17	71303890	71306984	-	71303890	71305512	5pMXE	0.12	50	50	ENSMUST00000233798.2	ENSMUSG00000024048.16	Myl12a	chr17	protein_coding	myosin, light chain 12A, regulatory, non-sarcomeric
chr17	71303890	71308755	-	71303890	71305512	5pMXE	0.12	50	50	ENSMUST00000233798.2	ENSMUSG00000024048.16	Myl12a	chr17	protein_coding	myosin, light chain 12A, regulatory, non-sarcomeric
chr17	71303890	71309667	-	71303890	71305512	5pMXE	0.12	50	50	ENSMUST00000233798.2	ENSMUSG00000024048.16	Myl12a	chr17	protein_coding	myosin, light chain 12A, regulatory, non-sarcomeric
chr17	71303890	71304880	-	71303890	71305512	A5SS	0.12	50	50	ENSMUST00000233798.2	ENSMUSG00000024048.16	Myl12a	chr17	protein_coding	myosin, light chain 12A, regulatory, non-sarcomeric
chr17	71303890	71306984	-	71303890	71304880	5pMXE	0.12	50	50	ENSMUST00000024846.13	ENSMUSG00000024048.16	Myl12a	chr17	protein_coding	myosin, light chain 12A, regulatory, non-sarcomeric
chr17	71303890	71308755	-	71303890	71304880	5pMXE	0.12	50	50	ENSMUST00000024846.13	ENSMUSG00000024048.16	Myl12a	chr17	protein_coding	myosin, light chain 12A, regulatory, non-sarcomeric
chr17	71303890	71309667	-	71303890	71304880	5pMXE	0.12	50	50	ENSMUST00000024846.13	ENSMUSG00000024048.16	Myl12a	chr17	protein_coding	myosin, light chain 12A, regulatory, non-sarcomeric
chr17	71303890	71306984	-	71303890	71309667	A5SS	0.12	50	50	ENSMUST00000123686.8	ENSMUSG00000024048.16	Myl12a	chr17	protein_coding	myosin, light chain 12A, regulatory, non-sarcomeric
chr17	71303890	71308755	-	71303890	71309667	A5SS	0.12	50	50	ENSMUST00000123686.8	ENSMUSG00000024048.16	Myl12a	chr17	protein_coding	myosin, light chain 12A, regulatory, non-sarcomeric
chr17	71303890	71308755	-	71303890	71306984	A5SS&ES	0.14	50	50	ENSMUST00000150456.2	ENSMUSG00000024048.16	Myl12a	chr17	protein_coding	myosin, light chain 12A, regulatory, non-sarcomeric
chr17	71311051	71324320	+	71311051	71317161	A3SS&ES	0.5	50	50	ENSMUST00000233893.2	ENSMUSG00000024049.16	Myom1	chr17	protein_coding	myomesin 1
chr17	71387890	71391233	+	71387890;71389491	71389198;71391233	ES	0.5	50	50	ENSMUST00000073211.13	ENSMUSG00000024049.16	Myom1	chr17	protein_coding	myomesin 1
chr17	71427677;71427811	71427789;71429552	+	71427677;71428143	71428121;71429552	MXE	0.5	100	100	ENSMUST00000073211.13	ENSMUSG00000024049.16	Myom1	chr17	protein_coding	myomesin 1
chr17	71427677;71427979	71427789;71428121	+	71427677	71428121	cassetteExon	0.5	100	100	ENSMUST00000073211.13	ENSMUSG00000024049.16	Myom1	chr17	protein_coding	myomesin 1
chr17	71388383	71389198	+	71387890	71389198	A5SS	0.5	50	50	ENSMUST00000073211.13	ENSMUSG00000024049.16	Myom1	chr17	protein_coding	myomesin 1
chr17	71387890	71391233	+	71387890	71389198	3pMXE	0.5	50	50	ENSMUST00000232851.2	ENSMUSG00000024049.16	Myom1	chr17	protein_coding	myomesin 1
chr17	71427677	71428121	+	71427979	71428121	5pMXE	0.5	50	50	ENSMUST00000233790.2	ENSMUSG00000024049.16	Myom1	chr17	protein_coding	myomesin 1
chr17	71536410;71536864	71536814;71537267	+	71536410	71537267	cassetteExon	0.5	100	100	ENSMUST00000142842.8	ENSMUSG00000024052.18	Lpin2	chr17	protein_coding	lipin 2
chr17	71532236	71536305	+	71532236	71536303	A3SS	0.5	50	50	ENSMUST00000142842.8	ENSMUSG00000024052.18	Lpin2	chr17	protein_coding	lipin 2
chr17	71538514	71539073	+	71538514	71540823	A3SS	0.5	50	50	ENSMUST00000142842.8	ENSMUSG00000024052.18	Lpin2	chr17	protein_coding	lipin 2
chr17	71490739	71521959	+	71490252	71521959	A5SS	0.25	50	50	ENSMUST00000142842.8	ENSMUSG00000024052.18	Lpin2	chr17	protein_coding	lipin 2
chr17	71491075	71521959	+	71490252	71521959	A5SS	0.25	50	50	ENSMUST00000142842.8	ENSMUSG00000024052.18	Lpin2	chr17	protein_coding	lipin 2
chr17	71511875	71521959	+	71490252	71521959	A5SS	0.25	50	50	ENSMUST00000142842.8	ENSMUSG00000024052.18	Lpin2	chr17	protein_coding	lipin 2
chr17	71491075	71521959	+	71490739	71521959	A5SS	0.25	50	50	ENSMUST00000156570.8	ENSMUSG00000024052.18	Lpin2	chr17	protein_coding	lipin 2
chr17	71511875	71521959	+	71490739	71521959	A5SS	0.25	50	50	ENSMUST00000156570.8	ENSMUSG00000024052.18	Lpin2	chr17	protein_coding	lipin 2
chr17	71548721;71549189	71549039;71549621	+	71548721	71549621	cassetteExon	0.5	100	100	ENSMUST00000129635.8	ENSMUSG00000024052.18	Lpin2	chr17	protein_coding	lipin 2
chr17	71511875	71521959	+	71491075	71521959	A5SS	0.25	50	50	ENSMUST00000129635.8	ENSMUSG00000024052.18	Lpin2	chr17	protein_coding	lipin 2
chr17	71617266	71618333	-	71617266	71617713	5pMXE	0.5	50	50	ENSMUST00000233057.2	ENSMUSG00000024053.12	Emilin2	chr17	protein_coding	elastin microfibril interfacer 2
chr17	71562209	71562975	-	71562242	71562975	A3SS	0.5	50	50	ENSMUST00000233057.2	ENSMUSG00000024053.12	Emilin2	chr17	protein_coding	elastin microfibril interfacer 2
chr17	71563684	71580369	-	71563687	71580369	A3SS	0.5	50	50	ENSMUST00000233057.2	ENSMUSG00000024053.12	Emilin2	chr17	protein_coding	elastin microfibril interfacer 2
chr17	71563687	71571780	-	71563687	71580369	A5SS	0.33	50	50	ENSMUST00000233057.2	ENSMUSG00000024053.12	Emilin2	chr17	protein_coding	elastin microfibril interfacer 2
chr17	71563687	71575443	-	71563687	71580369	A5SS	0.33	50	50	ENSMUST00000233057.2	ENSMUSG00000024053.12	Emilin2	chr17	protein_coding	elastin microfibril interfacer 2
chr17	71587844	71604117	-	71587844	71617144	A5SS	0.5	50	50	ENSMUST00000233057.2	ENSMUSG00000024053.12	Emilin2	chr17	protein_coding	elastin microfibril interfacer 2
chr17	71563687	71571780	-	71563687	71575443	A5SS	0.33	50	50	ENSMUST00000233148.2	ENSMUSG00000024053.12	Emilin2	chr17	protein_coding	elastin microfibril interfacer 2
chr17	71660552	71665132	-	71660552	71663330	5pMXE	0.5	50	50	ENSMUST00000138193.8	ENSMUSG00000024054.15	Smchd1	chr17	protein_coding	SMC hinge domain containing 1
chr17	71656743	71665132	-	71656743;71660552	71660381;71665132	ES	0.5	50	50	ENSMUST00000127430.2	ENSMUSG00000024054.15	Smchd1	chr17	protein_coding	SMC hinge domain containing 1
chr17	71683640	71684009	-	71677991	71684009	A3SS	0.5	50	50	ENSMUST00000127430.2	ENSMUSG00000024054.15	Smchd1	chr17	protein_coding	SMC hinge domain containing 1
chr17	71763495	71770757	-	71755841	71770757	A3SS	0.5	50	50	ENSMUST00000233872.2	ENSMUSG00000024054.15	Smchd1	chr17	protein_coding	SMC hinge domain containing 1
chr17	71755841	71762600	-	71755841	71770757	A5SS	0.5	50	50	ENSMUST00000233872.2	ENSMUSG00000024054.15	Smchd1	chr17	protein_coding	SMC hinge domain containing 1
chr17	71803348	71807267	-	71803348;71806364	71806262;71807267	ES	0.5	50	50	ENSMUST00000024851.10	ENSMUSG00000024056.11	Ndc80	chr17	protein_coding	NDC80 kinetochore complex component
chr17	71828146;71830438	71830387;71830577	-	71828146	71830577	cassetteExon	0.5	100	100	ENSMUST00000024851.10	ENSMUSG00000024056.11	Ndc80	chr17	protein_coding	NDC80 kinetochore complex component
chr17	71819494	71819929	-	71819494	71821184	A5SS	0.5	50	50	ENSMUST00000024851.10	ENSMUSG00000024056.11	Ndc80	chr17	protein_coding	NDC80 kinetochore complex component
chr17	71844282;71848742	71848569;71850432	+	71844282	71850432	cassetteExon	0.5	100	100	ENSMUST00000130218.8	ENSMUSG00000079356.11	Mettl4-ps1	chr17	transcribed_unprocessed_pseudogene	methyltransferase like 4, pseudogene 1
chr17	71850538	71851095	+	71850538	71863235	A3SS	0.5	50	50	ENSMUST00000130218.8	ENSMUSG00000079356.11	Mettl4-ps1	chr17	transcribed_unprocessed_pseudogene	methyltransferase like 4, pseudogene 1
chr17	71836457	71840581	+	71834458	71840581	A5SS	0.5	50	50	ENSMUST00000130218.8	ENSMUSG00000079356.11	Mettl4-ps1	chr17	transcribed_unprocessed_pseudogene	methyltransferase like 4, pseudogene 1
chr17	71843711	71844213	+	71843564	71844213	A5SS	0.5	50	50	ENSMUST00000130218.8	ENSMUSG00000079356.11	Mettl4-ps1	chr17	transcribed_unprocessed_pseudogene	methyltransferase like 4, pseudogene 1
chr17	71859136	71863235	+	71850538	71863235	A5SS	0.5	50	50	ENSMUST00000130218.8	ENSMUSG00000079356.11	Mettl4-ps1	chr17	transcribed_unprocessed_pseudogene	methyltransferase like 4, pseudogene 1
chr17	71885388	71895581	+	71885388	71895578	A3SS	0.5	50	50	ENSMUST00000167641.8	ENSMUSG00000052525.15	Spdya	chr17	protein_coding	speedy/RINGO cell cycle regulator family, member A
chr17	71865338;71868432	71868333;71875605	-	71865338	71875605	cassetteExon	0.5	100	100	ENSMUST00000130952.8	ENSMUSG00000085492.8	Trmt61b	chr17	lncRNA	tRNA methyltransferase 61B
chr17	71949828	71950143	+	71949828	71955772	A3SS	0.33	50	50	ENSMUST00000234560.2	ENSMUSG00000041057.11	Wdr43	chr17	protein_coding	WD repeat domain 43
chr17	71949828	71955768	+	71949828	71955772	A3SS	0.33	50	50	ENSMUST00000234560.2	ENSMUSG00000041057.11	Wdr43	chr17	protein_coding	WD repeat domain 43
chr17	71949828;71950231	71950143;71955768	+	71949828	71955768	cassetteExon	0.5	100	100	ENSMUST00000047086.10	ENSMUSG00000041057.11	Wdr43	chr17	protein_coding	WD repeat domain 43
chr17	71949828	71955768	+	71949828	71950143	3pMXE	0.33	50	50	ENSMUST00000234656.2	ENSMUSG00000041057.11	Wdr43	chr17	protein_coding	WD repeat domain 43
chr17	71980494	71994581	+	71980494;71992187	71992049;71994581	ES	0.33	50	50	ENSMUST00000097284.10	ENSMUSG00000045761.17	Togaram2	chr17	protein_coding	TOG array regulator of axonemal microtubules 2
chr17	72021767	72023317	+	72021767	72023374	A3SS	0.5	50	50	ENSMUST00000097284.10	ENSMUSG00000045761.17	Togaram2	chr17	protein_coding	TOG array regulator of axonemal microtubules 2
chr17	71991837	71992049	+	71980494	71992049	A5SS	0.5	50	50	ENSMUST00000097284.10	ENSMUSG00000045761.17	Togaram2	chr17	protein_coding	TOG array regulator of axonemal microtubules 2
chr17	71993726	71994581	+	71992187	71994581	A5SS	0.33	50	50	ENSMUST00000097284.10	ENSMUSG00000045761.17	Togaram2	chr17	protein_coding	TOG array regulator of axonemal microtubules 2
chr17	72020388	72021231	+	72016662	72021231	A5SS	0.5	50	50	ENSMUST00000097284.10	ENSMUSG00000045761.17	Togaram2	chr17	protein_coding	TOG array regulator of axonemal microtubules 2
chr17	71993726	71994581	+	71980494	71994581	A5SS	0.33	50	50	ENSMUST00000122869.2	ENSMUSG00000045761.17	Togaram2	chr17	protein_coding	TOG array regulator of axonemal microtubules 2
chr17	72076905	72096863	+	72075535	72096863	A5SS	0.16	50	50	ENSMUST00000229288.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72086985	72096863	+	72075535	72096863	A5SS	0.16	50	50	ENSMUST00000229288.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72088428	72096863	+	72075535	72096863	A5SS	0.16	50	50	ENSMUST00000229288.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72089064	72096863	+	72075535	72096863	A5SS	0.16	50	50	ENSMUST00000229288.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72089845	72096863	+	72075535	72096863	A5SS	0.16	50	50	ENSMUST00000229288.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72076905;72086985	72086916;72096863	+	72076905	72096863	cassetteExon	0.5	100	100	ENSMUST00000229328.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72088428	72096863	+	72076905	72096863	A5SS	0.16	50	50	ENSMUST00000229328.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72089064	72096863	+	72076905	72096863	A5SS	0.16	50	50	ENSMUST00000229328.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72089845	72096863	+	72076905	72096863	A5SS	0.16	50	50	ENSMUST00000229328.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72117977	72134687	+	72117977;72131825	72131685;72134687	ES	0.33	50	50	ENSMUST00000230747.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72138334	72144689	+	72138334;72141302	72141179;72144689	ES	0.33	50	50	ENSMUST00000230747.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72144753	72163223	+	72144753;72156959	72156887;72163223	ES	0.5	50	50	ENSMUST00000230747.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72113736;72115337	72115253;72117842	+	72113736	72117842	cassetteExon	0.5	100	100	ENSMUST00000230747.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72141302;72144334	72144211;72144689	+	72141302	72144689	cassetteExon	0.5	100	100	ENSMUST00000230747.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72131911	72135502	+	72134776	72135502	A5SS&ES	0.33	50	50	ENSMUST00000230747.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72134585	72134687	+	72131825	72134687	A5SS	0.33	50	50	ENSMUST00000230747.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72135055	72135502	+	72134776	72135502	A5SS	0.33	50	50	ENSMUST00000230747.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72135645	72138200	+	72135700	72138200	A5SS	0.5	50	50	ENSMUST00000230747.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72117977;72131911	72131685;72135502	+	72117977;72134776	72134687;72135502	MXE	0.5	100	100	ENSMUST00000231105.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72135645	72141040	+	72135645	72138200	A3SS&ES	0.5	50	50	ENSMUST00000231105.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72134585	72134687	+	72117977	72134687	A5SS	0.33	50	50	ENSMUST00000231105.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72144753	72163223	+	72144753	72156887	3pMXE	0.5	50	50	ENSMUST00000229952.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72088428	72096863	+	72086985	72096863	A5SS	0.2	50	50	ENSMUST00000230305.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72089064	72096863	+	72086985	72096863	A5SS	0.2	50	50	ENSMUST00000230305.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72089845	72096863	+	72086985	72096863	A5SS	0.2	50	50	ENSMUST00000230305.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72089064	72096863	+	72088428	72096863	A5SS	0.16	50	50	ENSMUST00000229874.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72089845	72096863	+	72088428	72096863	A5SS	0.16	50	50	ENSMUST00000229874.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72089845	72096863	+	72089064	72096863	A5SS	0.16	50	50	ENSMUST00000024854.9	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72117977;72135055	72134687;72135502	+	72117977;72131911	72131685;72135502	MXE	0.5	100	100	ENSMUST00000230749.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72135645;72138334	72138200;72144689	+	72135645;72141302	72141040;72144689	MXE	0.5	100	100	ENSMUST00000230749.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72131911	72135502	+	72135055	72135502	5pMXE	0.33	50	50	ENSMUST00000230845.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72144334	72144689	+	72138334	72144689	A5SS	0.33	50	50	ENSMUST00000231131.2	ENSMUSG00000024059.11	Clip4	chr17	protein_coding	CAP-GLY domain containing linker protein family, member 4
chr17	72687156	72910002	-	72687156	72910023	A5SS	0.5	50	50	ENSMUST00000086639.6	ENSMUSG00000055471.8	Alk	chr17	protein_coding	anaplastic lymphoma kinase
chr17	73144703	73153274	+	73143786	73153274	A5SS	0.2	50	50	ENSMUST00000045174.7	ENSMUSG00000039770.7	Ypel5	chr17	protein_coding	yippee like 5
chr17	73144814	73153274	+	73143786	73153274	A5SS	0.2	50	50	ENSMUST00000045174.7	ENSMUSG00000039770.7	Ypel5	chr17	protein_coding	yippee like 5
chr17	73146945	73153274	+	73143786	73153274	A5SS	0.2	50	50	ENSMUST00000045174.7	ENSMUSG00000039770.7	Ypel5	chr17	protein_coding	yippee like 5
chr17	73148124	73153274	+	73143786	73153274	A5SS	0.2	50	50	ENSMUST00000045174.7	ENSMUSG00000039770.7	Ypel5	chr17	protein_coding	yippee like 5
chr17	73144814	73153274	+	73144703	73153274	A5SS	0.2	50	50	ENSMUST00000233210.2	ENSMUSG00000039770.7	Ypel5	chr17	protein_coding	yippee like 5
chr17	73146945	73153274	+	73144703	73153274	A5SS	0.2	50	50	ENSMUST00000233210.2	ENSMUSG00000039770.7	Ypel5	chr17	protein_coding	yippee like 5
chr17	73148124	73153274	+	73144703	73153274	A5SS	0.2	50	50	ENSMUST00000233210.2	ENSMUSG00000039770.7	Ypel5	chr17	protein_coding	yippee like 5
chr17	73146945	73153274	+	73144814	73153274	A5SS	0.2	50	50	ENSMUST00000233886.2	ENSMUSG00000039770.7	Ypel5	chr17	protein_coding	yippee like 5
chr17	73148124	73153274	+	73144814	73153274	A5SS	0.2	50	50	ENSMUST00000233886.2	ENSMUSG00000039770.7	Ypel5	chr17	protein_coding	yippee like 5
chr17	73148124	73153274	+	73146945	73153274	A5SS	0.5	50	50	ENSMUST00000233221.2	ENSMUSG00000039770.7	Ypel5	chr17	protein_coding	yippee like 5
chr17	73228285;73245009	73244867;73246251	+	73228285	73246251	cassetteExon	0.5	100	100	ENSMUST00000024857.14	ENSMUSG00000024063.14	Lbh	chr17	protein_coding	limb-bud and heart
chr17	73415151	73468818	+	73415140	73468818	A5SS	0.25	50	50	ENSMUST00000130574.4	ENSMUSG00000054469.15	Lclat1	chr17	protein_coding	lysocardiolipin acyltransferase 1
chr17	73415172	73468818	+	73415140	73468818	A5SS	0.25	50	50	ENSMUST00000130574.4	ENSMUSG00000054469.15	Lclat1	chr17	protein_coding	lysocardiolipin acyltransferase 1
chr17	73433626	73468818	+	73415140	73468818	A5SS	0.25	50	50	ENSMUST00000130574.4	ENSMUSG00000054469.15	Lclat1	chr17	protein_coding	lysocardiolipin acyltransferase 1
chr17	73415172	73468818	+	73415151	73468818	A5SS	0.25	50	50	ENSMUST00000149064.9	ENSMUSG00000054469.15	Lclat1	chr17	protein_coding	lysocardiolipin acyltransferase 1
chr17	73433626	73468818	+	73415151	73468818	A5SS	0.25	50	50	ENSMUST00000149064.9	ENSMUSG00000054469.15	Lclat1	chr17	protein_coding	lysocardiolipin acyltransferase 1
chr17	73470055	73476491	+	73468986	73476491	A5SS	0.5	50	50	ENSMUST00000149064.9	ENSMUSG00000054469.15	Lclat1	chr17	protein_coding	lysocardiolipin acyltransferase 1
chr17	73433626	73468818	+	73415172	73468818	A5SS	0.25	50	50	ENSMUST00000067545.8	ENSMUSG00000054469.15	Lclat1	chr17	protein_coding	lysocardiolipin acyltransferase 1
chr17	73511285	73546713	+	73503790	73546713	A5SS	0.5	50	50	ENSMUST00000067545.8	ENSMUSG00000054469.15	Lclat1	chr17	protein_coding	lysocardiolipin acyltransferase 1
chr17	73559697	73559864	+	73559697	73561090	A3SS	0.5	50	50	ENSMUST00000233479.2	ENSMUSG00000117292.2	E330032C10Rik	chr17	lncRNA	RIKEN cDNA E330032C10 gene
chr17	73560917	73561090	+	73559697	73561090	A5SS	0.5	50	50	ENSMUST00000233479.2	ENSMUSG00000117292.2	E330032C10Rik	chr17	lncRNA	RIKEN cDNA E330032C10 gene
chr17	73814910	73816521	-	73812520	73816521	A3SS	0.5	50	50	ENSMUST00000024858.12	ENSMUSG00000024064.15	Galnt14	chr17	protein_coding	polypeptide N-acetylgalactosaminyltransferase 14
chr17	73827002	73829613	-	73819157	73829613	A3SS	0.5	50	50	ENSMUST00000024858.12	ENSMUSG00000024064.15	Galnt14	chr17	protein_coding	polypeptide N-acetylgalactosaminyltransferase 14
chr17	73843908	73848874	-	73843908	73852020	A5SS	0.5	50	50	ENSMUST00000024858.12	ENSMUSG00000024064.15	Galnt14	chr17	protein_coding	polypeptide N-acetylgalactosaminyltransferase 14
chr17	74205406	74205956	-	74205406;74205682	74205632;74205956	ES	0.5	50	50	ENSMUST00000233392.2	ENSMUSG00000024066.10	Xdh	chr17	protein_coding	xanthine dehydrogenase
chr17	74196405	74198106	-	74193514	74198106	A3SS	0.5	50	50	ENSMUST00000233392.2	ENSMUSG00000024066.10	Xdh	chr17	protein_coding	xanthine dehydrogenase
chr17	74193514	74193609	-	74193514	74198106	A5SS	0.33	50	50	ENSMUST00000233392.2	ENSMUSG00000024066.10	Xdh	chr17	protein_coding	xanthine dehydrogenase
chr17	74193514	74194881	-	74193514	74198106	A5SS	0.33	50	50	ENSMUST00000233392.2	ENSMUSG00000024066.10	Xdh	chr17	protein_coding	xanthine dehydrogenase
chr17	74241411	74241797	-	74233611	74241797	A3SS	0.5	50	50	ENSMUST00000024866.6	ENSMUSG00000024066.10	Xdh	chr17	protein_coding	xanthine dehydrogenase
chr17	74242413	74242867	-	74241858	74242867	A3SS	0.5	50	50	ENSMUST00000024866.6	ENSMUSG00000024066.10	Xdh	chr17	protein_coding	xanthine dehydrogenase
chr17	74225552	74225807	-	74225552	74227388	A5SS	0.5	50	50	ENSMUST00000024866.6	ENSMUSG00000024066.10	Xdh	chr17	protein_coding	xanthine dehydrogenase
chr17	74241858	74250814	-	74241858	74242867	A5SS&ES	0.5	50	50	ENSMUST00000024866.6	ENSMUSG00000024066.10	Xdh	chr17	protein_coding	xanthine dehydrogenase
chr17	74250899	74255178	-	74250899	74257073	A5SS	0.5	50	50	ENSMUST00000024866.6	ENSMUSG00000024066.10	Xdh	chr17	protein_coding	xanthine dehydrogenase
chr17	74193514	74193609	-	74193514	74194881	A5SS	0.33	50	50	ENSMUST00000233162.2	ENSMUSG00000024066.10	Xdh	chr17	protein_coding	xanthine dehydrogenase
chr17	74248144	74250814	-	74241858	74250814	A3SS	0.5	50	50	ENSMUST00000233621.2	ENSMUSG00000024066.10	Xdh	chr17	protein_coding	xanthine dehydrogenase
chr17	74334136	74375396	-	74334136	74354542	5pMXE	0.5	50	50	ENSMUST00000043458.9	ENSMUSG00000038541.9	Srd5a2	chr17	protein_coding	steroid 5 alpha-reductase 2
chr17	74363415	74375396	-	74334136	74375396	A3SS	0.5	50	50	ENSMUST00000232749.2	ENSMUSG00000117038.2	Gm49880	chr17	lncRNA	predicted gene, 49880
chr17	74380937	74385758	-	74380937	74385742	A5SS	0.5	50	50	ENSMUST00000232749.2	ENSMUSG00000117038.2	Gm49880	chr17	lncRNA	predicted gene, 49880
chr17	74385942	74387042	-	74385942	74386079	5pMXE	0.5	50	50	ENSMUST00000233374.2	ENSMUSG00000117226.2	Gm31084	chr17	lncRNA	predicted gene, 31084
chr17	74509360	74532427	-	74509360;74524098	74524022;74532427	ES	0.33	50	50	ENSMUST00000233514.3	ENSMUSG00000058704.10	Memo1	chr17	protein_coding	mediator of cell motility 1
chr17	74549011	74562223	-	74549011;74552082	74551970;74562223	ES	0.33	50	50	ENSMUST00000233514.3	ENSMUSG00000058704.10	Memo1	chr17	protein_coding	mediator of cell motility 1
chr17	74509360;74527535	74527483;74532427	-	74509360;74524098	74524022;74532427	MXE	0.5	100	100	ENSMUST00000233514.3	ENSMUSG00000058704.10	Memo1	chr17	protein_coding	mediator of cell motility 1
chr17	74532569	74537223	-	74532569	74548900	A5SS	0.33	50	50	ENSMUST00000233514.3	ENSMUSG00000058704.10	Memo1	chr17	protein_coding	mediator of cell motility 1
chr17	74565500	74595453	-	74565500	74601687	A5SS	0.5	50	50	ENSMUST00000233514.3	ENSMUSG00000058704.10	Memo1	chr17	protein_coding	mediator of cell motility 1
chr17	74532569	74562223	-	74532569;74549011	74548900;74562223	ES	0.33	50	50	ENSMUST00000233422.2	ENSMUSG00000058704.10	Memo1	chr17	protein_coding	mediator of cell motility 1
chr17	74509360	74532427	-	74509360;74527535	74527483;74532427	ES	0.33	50	50	ENSMUST00000078459.8	ENSMUSG00000058704.10	Memo1	chr17	protein_coding	mediator of cell motility 1
chr17	74509360;74549011	74548900;74562223	-	74509360;74532569	74524022;74562223	MXE	0.5	100	100	ENSMUST00000232989.2	ENSMUSG00000058704.10	Memo1	chr17	protein_coding	mediator of cell motility 1
chr17	74552082	74562223	-	74532569	74562223	A3SS	0.33	50	50	ENSMUST00000232989.2	ENSMUSG00000058704.10	Memo1	chr17	protein_coding	mediator of cell motility 1
chr17	74532569	74537223	-	74532569	74562223	A5SS	0.33	50	50	ENSMUST00000232989.2	ENSMUSG00000058704.10	Memo1	chr17	protein_coding	mediator of cell motility 1
chr17	74509360;74532569	74532427;74548900	-	74509360	74548900	cassetteExon	0.5	100	100	ENSMUST00000233176.2	ENSMUSG00000058704.10	Memo1	chr17	protein_coding	mediator of cell motility 1
chr17	74509360;74532569	74532427;74562223	-	74509360;74549011	74548900;74562223	MXE	0.5	100	100	ENSMUST00000233176.2	ENSMUSG00000058704.10	Memo1	chr17	protein_coding	mediator of cell motility 1
chr17	74509360	74524022	-	74509360	74548900	A5SS	0.25	50	50	ENSMUST00000233176.2	ENSMUSG00000058704.10	Memo1	chr17	protein_coding	mediator of cell motility 1
chr17	74509360	74527483	-	74509360	74548900	A5SS	0.25	50	50	ENSMUST00000233176.2	ENSMUSG00000058704.10	Memo1	chr17	protein_coding	mediator of cell motility 1
chr17	74549011	74562223	-	74552082	74562223	3pMXE	0.33	50	50	ENSMUST00000233144.2	ENSMUSG00000058704.10	Memo1	chr17	protein_coding	mediator of cell motility 1
chr17	74606819	74622897	-	74606819;74614857	74614715;74622897	ES	0.5	50	50	ENSMUST00000233581.2	ENSMUSG00000024067.15	Dpy30	chr17	protein_coding	dpy-30, histone methyltransferase complex regulatory subunit
chr17	74623111	74630756	-	74623111	74623340	5pMXE	0.33	50	50	ENSMUST00000233581.2	ENSMUSG00000024067.15	Dpy30	chr17	protein_coding	dpy-30, histone methyltransferase complex regulatory subunit
chr17	74623111	74623215	-	74623111	74623340	A5SS	0.33	50	50	ENSMUST00000233581.2	ENSMUSG00000024067.15	Dpy30	chr17	protein_coding	dpy-30, histone methyltransferase complex regulatory subunit
chr17	74623111	74623215	-	74623111	74630756	A5SS	0.33	50	50	ENSMUST00000164832.9	ENSMUSG00000024067.15	Dpy30	chr17	protein_coding	dpy-30, histone methyltransferase complex regulatory subunit
chr17	74663164	74674243	+	74663164;74666344	74666249;74674243	ES	0.5	50	50	ENSMUST00000224711.2	ENSMUSG00000024068.9	Spast	chr17	protein_coding	spastin
chr17	74676280	74679254	+	74676280;74678499	74678425;74679254	ES	0.5	50	50	ENSMUST00000224711.2	ENSMUSG00000024068.9	Spast	chr17	protein_coding	spastin
chr17	74646440	74658945	+	74646440	74658948	A3SS	0.5	50	50	ENSMUST00000224711.2	ENSMUSG00000024068.9	Spast	chr17	protein_coding	spastin
chr17	74675956	74676120	+	74675956	74676187	A3SS	0.5	50	50	ENSMUST00000224711.2	ENSMUSG00000024068.9	Spast	chr17	protein_coding	spastin
chr17	74717423	74719602	+	74717423;74719317	74719269;74719602	ES	0.5	50	50	ENSMUST00000234515.2	ENSMUSG00000024069.15	Slc30a6	chr17	protein_coding	solute carrier family 30 (zinc transporter), member 6
chr17	74722717;74725662	74725615;74726527	+	74722717	74726527	cassetteExon	0.5	100	100	ENSMUST00000234515.2	ENSMUSG00000024069.15	Slc30a6	chr17	protein_coding	solute carrier family 30 (zinc transporter), member 6
chr17	74712722	74714201	+	74712722	74714216	A3SS	0.33	50	50	ENSMUST00000234515.2	ENSMUSG00000024069.15	Slc30a6	chr17	protein_coding	solute carrier family 30 (zinc transporter), member 6
chr17	74712722	74730540	+	74712722	74714216	A3SS&ES	0.33	50	50	ENSMUST00000234515.2	ENSMUSG00000024069.15	Slc30a6	chr17	protein_coding	solute carrier family 30 (zinc transporter), member 6
chr17	74715921	74716348	+	74715921	74716353	A3SS	0.5	50	50	ENSMUST00000234515.2	ENSMUSG00000024069.15	Slc30a6	chr17	protein_coding	solute carrier family 30 (zinc transporter), member 6
chr17	74716383	74716600	+	74716383	74717281	A3SS	0.33	50	50	ENSMUST00000234515.2	ENSMUSG00000024069.15	Slc30a6	chr17	protein_coding	solute carrier family 30 (zinc transporter), member 6
chr17	74716383	74717329	+	74716383	74717281	A3SS	0.33	50	50	ENSMUST00000234515.2	ENSMUSG00000024069.15	Slc30a6	chr17	protein_coding	solute carrier family 30 (zinc transporter), member 6
chr17	74716383	74716600	+	74716383	74717329	A3SS	0.33	50	50	ENSMUST00000024870.9	ENSMUSG00000024069.15	Slc30a6	chr17	protein_coding	solute carrier family 30 (zinc transporter), member 6
chr17	74712722	74730540	+	74712722	74714201	A3SS&ES	0.33	50	50	ENSMUST00000179074.9	ENSMUSG00000024069.15	Slc30a6	chr17	protein_coding	solute carrier family 30 (zinc transporter), member 6
chr17	74740897;74742697	74742620;74743003	-	74740897	74743003	cassetteExon	0.5	100	100	ENSMUST00000052124.9	ENSMUSG00000039193.10	Nlrc4	chr17	protein_coding	NLR family, CARD domain containing 4
chr17	74754105	74754953	-	74754119	74754953	A3SS	0.5	50	50	ENSMUST00000052124.9	ENSMUSG00000039193.10	Nlrc4	chr17	protein_coding	NLR family, CARD domain containing 4
chr17	74796789	74797476	+	74796789	74799322	A3SS	0.33	50	50	ENSMUST00000234939.2	ENSMUSG00000024072.10	Yipf4	chr17	protein_coding	Yip1 domain family, member 4
chr17	74796789	74799341	+	74796789	74799322	A3SS	0.33	50	50	ENSMUST00000234939.2	ENSMUSG00000024072.10	Yipf4	chr17	protein_coding	Yip1 domain family, member 4
chr17	74796789;74797707	74797476;74799341	+	74796789	74799341	cassetteExon	0.5	100	100	ENSMUST00000024873.7	ENSMUSG00000024072.10	Yipf4	chr17	protein_coding	Yip1 domain family, member 4
chr17	74797086	74799341	+	74796789	74799341	A5SS	0.25	50	50	ENSMUST00000024873.7	ENSMUSG00000024072.10	Yipf4	chr17	protein_coding	Yip1 domain family, member 4
chr17	74798870	74799341	+	74796789	74799341	A5SS	0.25	50	50	ENSMUST00000024873.7	ENSMUSG00000024072.10	Yipf4	chr17	protein_coding	Yip1 domain family, member 4
chr17	74801010	74803585	+	74801094	74803585	A5SS	0.5	50	50	ENSMUST00000024873.7	ENSMUSG00000024072.10	Yipf4	chr17	protein_coding	Yip1 domain family, member 4
chr17	74797086	74799341	+	74797707	74799341	A5SS&ES	0.25	50	50	ENSMUST00000234432.2	ENSMUSG00000024072.10	Yipf4	chr17	protein_coding	Yip1 domain family, member 4
chr17	74798870	74799341	+	74797707	74799341	A5SS	0.25	50	50	ENSMUST00000234432.2	ENSMUSG00000024072.10	Yipf4	chr17	protein_coding	Yip1 domain family, member 4
chr17	74798870	74799341	+	74797086	74799341	A5SS	0.25	50	50	ENSMUST00000234448.2	ENSMUSG00000024072.10	Yipf4	chr17	protein_coding	Yip1 domain family, member 4
chr17	74830573	74835011	-	74830573	74834628	5pMXE	0.5	50	50	ENSMUST00000235009.2	ENSMUSG00000117358.2	Gm31645	chr17	lncRNA	predicted gene, 31645
chr17	74828482	74830510	-	74826910	74830510	A3SS	0.5	50	50	ENSMUST00000235009.2	ENSMUSG00000117358.2	Gm31645	chr17	lncRNA	predicted gene, 31645
chr17	74826910	74827488	-	74826910	74830510	A5SS	0.33	50	50	ENSMUST00000235009.2	ENSMUSG00000117358.2	Gm31645	chr17	lncRNA	predicted gene, 31645
chr17	74826910	74830447	-	74826910	74830510	A5SS	0.33	50	50	ENSMUST00000235009.2	ENSMUSG00000117358.2	Gm31645	chr17	lncRNA	predicted gene, 31645
chr17	74826910	74830510	-	74826910;74828482	74827488;74830510	ES	0.5	50	50	ENSMUST00000234433.2	ENSMUSG00000117358.2	Gm31645	chr17	lncRNA	predicted gene, 31645
chr17	74826910	74830447	-	74826910	74827488	A5SS&ES	0.33	50	50	ENSMUST00000234433.2	ENSMUSG00000117358.2	Gm31645	chr17	lncRNA	predicted gene, 31645
chr17	74959741;74959982	74959876;74961384	+	74959741	74961384	cassetteExon	0.5	100	100	ENSMUST00000180037.8	ENSMUSG00000024073.17	Birc6	chr17	protein_coding	baculoviral IAP repeat-containing 6
chr17	74984374;74993288	74993116;74996213	+	74984374	74996213	cassetteExon	0.5	100	100	ENSMUST00000180037.8	ENSMUSG00000024073.17	Birc6	chr17	protein_coding	baculoviral IAP repeat-containing 6
chr17	74900244	74901317	+	74900244	74901359	A3SS	0.5	50	50	ENSMUST00000180037.8	ENSMUSG00000024073.17	Birc6	chr17	protein_coding	baculoviral IAP repeat-containing 6
chr17	74919340	74920390	+	74919340	74920372	A3SS	0.5	50	50	ENSMUST00000180037.8	ENSMUSG00000024073.17	Birc6	chr17	protein_coding	baculoviral IAP repeat-containing 6
chr17	74925558	74926720	+	74925558	74926702	A3SS	0.5	50	50	ENSMUST00000180037.8	ENSMUSG00000024073.17	Birc6	chr17	protein_coding	baculoviral IAP repeat-containing 6
chr17	74959741	74961349	+	74959741	74961384	A3SS	0.33	50	50	ENSMUST00000180037.8	ENSMUSG00000024073.17	Birc6	chr17	protein_coding	baculoviral IAP repeat-containing 6
chr17	74913118	74915092	+	74913130	74915092	A5SS	0.5	50	50	ENSMUST00000180037.8	ENSMUSG00000024073.17	Birc6	chr17	protein_coding	baculoviral IAP repeat-containing 6
chr17	74922352	74925431	+	74922325	74925431	A5SS	0.5	50	50	ENSMUST00000180037.8	ENSMUSG00000024073.17	Birc6	chr17	protein_coding	baculoviral IAP repeat-containing 6
chr17	74959741	74959876	+	74959741	74961349	A3SS	0.33	50	50	ENSMUST00000182817.2	ENSMUSG00000024073.17	Birc6	chr17	protein_coding	baculoviral IAP repeat-containing 6
chr17	75058123	75084639	+	75058123;75077351	75077238;75084639	ES	0.5	50	50	ENSMUST00000024882.8	ENSMUSG00000024078.8	Ttc27	chr17	protein_coding	tetratricopeptide repeat domain 27
chr17	75142380;75144895	75144819;75147294	+	75142380	75147294	cassetteExon	0.5	100	100	ENSMUST00000024882.8	ENSMUSG00000024078.8	Ttc27	chr17	protein_coding	tetratricopeptide repeat domain 27
chr17	75028645	75030583	+	75028645	75031613	A3SS	0.5	50	50	ENSMUST00000024882.8	ENSMUSG00000024078.8	Ttc27	chr17	protein_coding	tetratricopeptide repeat domain 27
chr17	75169141	75170332	+	75169141	75170329	A3SS	0.5	50	50	ENSMUST00000024882.8	ENSMUSG00000024078.8	Ttc27	chr17	protein_coding	tetratricopeptide repeat domain 27
chr17	75077127	75077238	+	75058123	75077238	A5SS	0.5	50	50	ENSMUST00000024882.8	ENSMUSG00000024078.8	Ttc27	chr17	protein_coding	tetratricopeptide repeat domain 27
chr17	75106277	75165004	+	75163601	75165004	A5SS&ES	0.5	50	50	ENSMUST00000024882.8	ENSMUSG00000024078.8	Ttc27	chr17	protein_coding	tetratricopeptide repeat domain 27
chr17	75261727	75262063	+	75257498	75262063	A5SS	0.5	50	50	ENSMUST00000235100.2	ENSMUSG00000117342.2	Gm31818	chr17	lncRNA	predicted gene, 31818
chr17	75534236	75555889	+	75534236;75550725	75550723;75555889	ES	0.5	50	50	ENSMUST00000234490.2	ENSMUSG00000001870.17	Ltbp1	chr17	protein_coding	latent transforming growth factor beta binding protein 1
chr17	75617273	75621998	+	75617273;75620093	75619971;75621998	ES	0.5	50	50	ENSMUST00000234490.2	ENSMUSG00000001870.17	Ltbp1	chr17	protein_coding	latent transforming growth factor beta binding protein 1
chr17	75314396	75315415	+	75314396	75372906	A3SS	0.33	50	50	ENSMUST00000234490.2	ENSMUSG00000001870.17	Ltbp1	chr17	protein_coding	latent transforming growth factor beta binding protein 1
chr17	75314396	75354574	+	75314396	75372906	A3SS	0.33	50	50	ENSMUST00000234490.2	ENSMUSG00000001870.17	Ltbp1	chr17	protein_coding	latent transforming growth factor beta binding protein 1
chr17	75581029	75583550	+	75581029	75583391	A3SS	0.5	50	50	ENSMUST00000234490.2	ENSMUSG00000001870.17	Ltbp1	chr17	protein_coding	latent transforming growth factor beta binding protein 1
chr17	75314396	75315415	+	75314396	75354574	A3SS	0.33	50	50	ENSMUST00000234008.2	ENSMUSG00000001870.17	Ltbp1	chr17	protein_coding	latent transforming growth factor beta binding protein 1
chr17	75743163	75798753	+	75743163;75795944	75795812;75798753	ES	0.25	50	50	ENSMUST00000235103.2	ENSMUSG00000071042.13	Rasgrp3	chr17	protein_coding	RAS, guanyl releasing protein 3
chr17	75743163	75759166	+	75743163	75795812	A3SS	0.33	50	50	ENSMUST00000235103.2	ENSMUSG00000071042.13	Rasgrp3	chr17	protein_coding	RAS, guanyl releasing protein 3
chr17	75772655	75795812	+	75743163	75795812	A5SS	0.5	50	50	ENSMUST00000235103.2	ENSMUSG00000071042.13	Rasgrp3	chr17	protein_coding	RAS, guanyl releasing protein 3
chr17	75772655	75798753	+	75795944	75798753	A5SS&ES	0.25	50	50	ENSMUST00000235103.2	ENSMUSG00000071042.13	Rasgrp3	chr17	protein_coding	RAS, guanyl releasing protein 3
chr17	75798274	75798753	+	75795944	75798753	A5SS	0.25	50	50	ENSMUST00000235103.2	ENSMUSG00000071042.13	Rasgrp3	chr17	protein_coding	RAS, guanyl releasing protein 3
chr17	75743163	75798753	+	75743163	75759166	3pMXE	0.33	50	50	ENSMUST00000234640.2	ENSMUSG00000071042.13	Rasgrp3	chr17	protein_coding	RAS, guanyl releasing protein 3
chr17	75772655	75798753	+	75743163	75798753	A5SS	0.25	50	50	ENSMUST00000164192.9	ENSMUSG00000071042.13	Rasgrp3	chr17	protein_coding	RAS, guanyl releasing protein 3
chr17	75798274	75798753	+	75743163	75798753	A5SS	0.25	50	50	ENSMUST00000164192.9	ENSMUSG00000071042.13	Rasgrp3	chr17	protein_coding	RAS, guanyl releasing protein 3
chr17	75772655	75798753	+	75772655;75795944	75795812;75798753	ES	0.33	50	50	ENSMUST00000095204.6	ENSMUSG00000071042.13	Rasgrp3	chr17	protein_coding	RAS, guanyl releasing protein 3
chr17	75772655	75786597	+	75772655	75795812	A3SS	0.33	50	50	ENSMUST00000095204.6	ENSMUSG00000071042.13	Rasgrp3	chr17	protein_coding	RAS, guanyl releasing protein 3
chr17	75772655	75786597	+	75772655	75798753	A3SS	0.33	50	50	ENSMUST00000234660.2	ENSMUSG00000071042.13	Rasgrp3	chr17	protein_coding	RAS, guanyl releasing protein 3
chr17	75798274	75798753	+	75772655	75798753	A5SS	0.25	50	50	ENSMUST00000234660.2	ENSMUSG00000071042.13	Rasgrp3	chr17	protein_coding	RAS, guanyl releasing protein 3
chr17	75847186	75851743	-	75847186;75848375	75848191;75851743	ES	0.5	50	50	ENSMUST00000112507.4	ENSMUSG00000002017.11	Fam98a	chr17	protein_coding	family with sequence similarity 98, member A
chr17	78508528	78587402	+	78508528;78545344	78545171;78587402	ES	0.5	50	50	ENSMUST00000112498.3	ENSMUSG00000024074.9	Crim1	chr17	protein_coding	cysteine rich transmembrane BMP regulator 1 (chordin like)
chr17	78545344	78588675	+	78545344;78587644	78587402;78588675	ES	0.5	50	50	ENSMUST00000112498.3	ENSMUSG00000024074.9	Crim1	chr17	protein_coding	cysteine rich transmembrane BMP regulator 1 (chordin like)
chr17	78588795	78620553	+	78588795;78610537	78610416;78620553	ES	0.5	50	50	ENSMUST00000112498.3	ENSMUSG00000024074.9	Crim1	chr17	protein_coding	cysteine rich transmembrane BMP regulator 1 (chordin like)
chr17	78610537	78642656	+	78610537	78620553	3pMXE	0.5	50	50	ENSMUST00000234546.2	ENSMUSG00000024074.9	Crim1	chr17	protein_coding	cysteine rich transmembrane BMP regulator 1 (chordin like)
chr17	78508528;78545344	78545171;78588675	+	78508528;78587644	78587402;78588675	MXE	0.5	100	100	ENSMUST00000234546.2	ENSMUSG00000024074.9	Crim1	chr17	protein_coding	cysteine rich transmembrane BMP regulator 1 (chordin like)
chr17	78588795	78620553	+	78588795	78610416	A3SS&ES	0.5	50	50	ENSMUST00000234700.2	ENSMUSG00000024074.9	Crim1	chr17	protein_coding	cysteine rich transmembrane BMP regulator 1 (chordin like)
chr17	78623175	78642656	+	78610537	78642656	A5SS	0.5	50	50	ENSMUST00000234700.2	ENSMUSG00000024074.9	Crim1	chr17	protein_coding	cysteine rich transmembrane BMP regulator 1 (chordin like)
chr17	78545344	78588675	+	78587644	78588675	5pMXE	0.5	50	50	ENSMUST00000234059.2	ENSMUSG00000024074.9	Crim1	chr17	protein_coding	cysteine rich transmembrane BMP regulator 1 (chordin like)
chr17	78588795;78610537	78610416;78642656	+	78588795;78623175	78620553;78642656	MXE	0.5	100	100	ENSMUST00000234059.2	ENSMUSG00000024074.9	Crim1	chr17	protein_coding	cysteine rich transmembrane BMP regulator 1 (chordin like)
chr17	78662606	78675221	+	78662606	78680007	A3SS	0.5	50	50	ENSMUST00000234439.2	ENSMUSG00000024074.9	Crim1	chr17	protein_coding	cysteine rich transmembrane BMP regulator 1 (chordin like)
chr17	78677546	78680007	+	78662606	78680007	A5SS	0.5	50	50	ENSMUST00000234439.2	ENSMUSG00000024074.9	Crim1	chr17	protein_coding	cysteine rich transmembrane BMP regulator 1 (chordin like)
chr17	78692248;78694500	78694420;78708059	-	78692248	78708059	cassetteExon	0.5	100	100	ENSMUST00000234052.2	ENSMUSG00000056121.17	Fez2	chr17	protein_coding	fasciculation and elongation protein zeta 2 (zygin II)
chr17	78685858	78692173	-	78689102	78692173	A3SS&ES	0.5	50	50	ENSMUST00000234052.2	ENSMUSG00000056121.17	Fez2	chr17	protein_coding	fasciculation and elongation protein zeta 2 (zygin II)
chr17	78686174	78689037	-	78679308	78689037	A3SS	0.33	50	50	ENSMUST00000234052.2	ENSMUSG00000056121.17	Fez2	chr17	protein_coding	fasciculation and elongation protein zeta 2 (zygin II)
chr17	78687327	78689037	-	78679308	78689037	A3SS	0.33	50	50	ENSMUST00000234052.2	ENSMUSG00000056121.17	Fez2	chr17	protein_coding	fasciculation and elongation protein zeta 2 (zygin II)
chr17	78708327	78708436	-	78708327	78710169	A5SS	0.5	50	50	ENSMUST00000234052.2	ENSMUSG00000056121.17	Fez2	chr17	protein_coding	fasciculation and elongation protein zeta 2 (zygin II)
chr17	78720401	78724888	-	78720401	78725262	A5SS	0.5	50	50	ENSMUST00000234052.2	ENSMUSG00000056121.17	Fez2	chr17	protein_coding	fasciculation and elongation protein zeta 2 (zygin II)
chr17	78686174	78689037	-	78686174;78687327	78687299;78689037	ES	0.5	50	50	ENSMUST00000234530.2	ENSMUSG00000056121.17	Fez2	chr17	protein_coding	fasciculation and elongation protein zeta 2 (zygin II)
chr17	78842113	78873444	+	78842113;78853873	78853808;78873444	ES	0.5	50	50	ENSMUST00000024880.11	ENSMUSG00000024076.11	Vit	chr17	protein_coding	vitrin
chr17	78881647	78884649	+	78881647	78886783	A3SS	0.5	50	50	ENSMUST00000024880.11	ENSMUSG00000024076.11	Vit	chr17	protein_coding	vitrin
chr17	78881395	78881514	+	78873600	78881514	A5SS	0.5	50	50	ENSMUST00000024880.11	ENSMUSG00000024076.11	Vit	chr17	protein_coding	vitrin
chr17	78977323;78977870	78977784;78980005	-	78977323	78980005	cassetteExon	0.5	100	100	ENSMUST00000145910.9	ENSMUSG00000024077.16	Strn	chr17	protein_coding	striatin, calmodulin binding protein
chr17	78995099	78996105	-	78995099	78999823	A5SS	0.5	50	50	ENSMUST00000145910.9	ENSMUSG00000024077.16	Strn	chr17	protein_coding	striatin, calmodulin binding protein
chr17	79076032	79076364	-	79076032	79080967	A5SS	0.33	50	50	ENSMUST00000097281.4	ENSMUSG00000039414.11	Heatr5b	chr17	protein_coding	HEAT repeat containing 5B
chr17	79076032	79078439	-	79076032	79080967	A5SS	0.33	50	50	ENSMUST00000097281.4	ENSMUSG00000039414.11	Heatr5b	chr17	protein_coding	HEAT repeat containing 5B
chr17	79076032	79076364	-	79076032	79078439	A5SS	0.33	50	50	ENSMUST00000232944.2	ENSMUSG00000039414.11	Heatr5b	chr17	protein_coding	HEAT repeat containing 5B
chr17	79143107	79145260	+	79143107;79144349	79144223;79145260	ES	0.5	50	50	ENSMUST00000233775.2	ENSMUSG00000050668.11	Gpatch11	chr17	protein_coding	G patch domain containing 11
chr17	79145331	79146416	+	79145331	79145679	3pMXE	0.5	50	50	ENSMUST00000233775.2	ENSMUSG00000050668.11	Gpatch11	chr17	protein_coding	G patch domain containing 11
chr17	79185962	79189829	-	79185702	79189829	A3SS	0.5	50	50	ENSMUST00000024884.5	ENSMUSG00000024079.5	Eif2ak2	chr17	protein_coding	eukaryotic translation initiation factor 2-alpha kinase 2
chr17	79202098	79202465	-	79202098	79204987	A5SS	0.5	50	50	ENSMUST00000169544.8	ENSMUSG00000038045.15	Sult6b1	chr17	protein_coding	sulfotransferase family, cytosolic, 6B, member 1
chr17	79213050	79214228	-	79213050	79214223	A5SS	0.5	50	50	ENSMUST00000169544.8	ENSMUSG00000038045.15	Sult6b1	chr17	protein_coding	sulfotransferase family, cytosolic, 6B, member 1
chr17	79224122	79225786	+	79223954	79225786	A5SS	0.33	50	50	ENSMUST00000180077.7	ENSMUSG00000062691.11	Cebpzos	chr17	protein_coding	CCAAT/enhancer binding protein (C/EBP), zeta, opposite strand
chr17	79224489	79225786	+	79223954	79225786	A5SS	0.33	50	50	ENSMUST00000180077.7	ENSMUSG00000062691.11	Cebpzos	chr17	protein_coding	CCAAT/enhancer binding protein (C/EBP), zeta, opposite strand
chr17	79224489	79225786	+	79224122	79225786	A5SS	0.33	50	50	ENSMUST00000063817.7	ENSMUSG00000062691.11	Cebpzos	chr17	protein_coding	CCAAT/enhancer binding protein (C/EBP), zeta, opposite strand
chr17	79239770	79242290	-	79239770	79242004	A5SS	0.5	50	50	ENSMUST00000024885.10	ENSMUSG00000024081.10	Cebpz	chr17	protein_coding	CCAAT/enhancer binding protein zeta
chr17	79251373	79253725	+	79251373;79252513	79252370;79253725	ES	0.5	50	50	ENSMUST00000024887.6	ENSMUSG00000024082.6	Ndufaf7	chr17	protein_coding	NADH:ubiquinone oxidoreductase complex assembly factor 7
chr17	79253898	79255202	+	79253898	79254304	3pMXE	0.5	50	50	ENSMUST00000024887.6	ENSMUSG00000024082.6	Ndufaf7	chr17	protein_coding	NADH:ubiquinone oxidoreductase complex assembly factor 7
chr17	79251373	79253725	+	79252513	79253725	5pMXE	0.5	50	50	ENSMUST00000233168.2	ENSMUSG00000024082.6	Ndufaf7	chr17	protein_coding	NADH:ubiquinone oxidoreductase complex assembly factor 7
chr17	79270008	79273604	-	79270005	79273604	A3SS	0.5	50	50	ENSMUST00000003191.14	ENSMUSG00000024070.16	Prkd3	chr17	protein_coding	protein kinase D3
chr17	79279269	79279832	-	79278912	79279832	A3SS	0.5	50	50	ENSMUST00000003191.14	ENSMUSG00000024070.16	Prkd3	chr17	protein_coding	protein kinase D3
chr17	79292782	79315689	-	79292782	79320053	A5SS	0.5	50	50	ENSMUST00000003191.14	ENSMUSG00000024070.16	Prkd3	chr17	protein_coding	protein kinase D3
chr17	79359817	79378102	+	79359817;79371503	79371357;79378102	ES	0.5	50	50	ENSMUST00000040789.6	ENSMUSG00000024084.9	Qpct	chr17	protein_coding	glutaminyl-peptide cyclotransferase (glutaminyl cyclase)
chr17	79643145	79660393	-	79643145	79662246	A5SS	0.5	50	50	ENSMUST00000068958.9	ENSMUSG00000036533.10	Cdc42ep3	chr17	protein_coding	CDC42 effector protein (Rho GTPase binding) 3
chr17	79921542	79928735	+	79919390	79928735	A5SS	0.25	50	50	ENSMUST00000223924.2	ENSMUSG00000036368.9	Rmdn2	chr17	protein_coding	regulator of microtubule dynamics 2
chr17	79922416	79928735	+	79919390	79928735	A5SS	0.25	50	50	ENSMUST00000223924.2	ENSMUSG00000036368.9	Rmdn2	chr17	protein_coding	regulator of microtubule dynamics 2
chr17	79922797	79928735	+	79919390	79928735	A5SS	0.25	50	50	ENSMUST00000223924.2	ENSMUSG00000036368.9	Rmdn2	chr17	protein_coding	regulator of microtubule dynamics 2
chr17	79922416	79928735	+	79921542	79928735	A5SS	0.25	50	50	ENSMUST00000224014.2	ENSMUSG00000036368.9	Rmdn2	chr17	protein_coding	regulator of microtubule dynamics 2
chr17	79922797	79928735	+	79921542	79928735	A5SS	0.25	50	50	ENSMUST00000224014.2	ENSMUSG00000036368.9	Rmdn2	chr17	protein_coding	regulator of microtubule dynamics 2
chr17	79929201	79934891	+	79929201	79957731	A3SS	0.5	50	50	ENSMUST00000040368.3	ENSMUSG00000036368.9	Rmdn2	chr17	protein_coding	regulator of microtubule dynamics 2
chr17	79922797	79928735	+	79922416	79928735	A5SS	0.25	50	50	ENSMUST00000040368.3	ENSMUSG00000036368.9	Rmdn2	chr17	protein_coding	regulator of microtubule dynamics 2
chr17	79934231	79957731	+	79929201	79957731	A5SS	0.33	50	50	ENSMUST00000040368.3	ENSMUSG00000036368.9	Rmdn2	chr17	protein_coding	regulator of microtubule dynamics 2
chr17	79935808	79957731	+	79929201	79957731	A5SS	0.33	50	50	ENSMUST00000040368.3	ENSMUSG00000036368.9	Rmdn2	chr17	protein_coding	regulator of microtubule dynamics 2
chr17	79929201	79957731	+	79929201;79935808	79934891;79957731	ES	0.33	50	50	ENSMUST00000086570.3	ENSMUSG00000036368.9	Rmdn2	chr17	protein_coding	regulator of microtubule dynamics 2
chr17	79934231	79934891	+	79929201	79934891	A5SS	0.5	50	50	ENSMUST00000086570.3	ENSMUSG00000036368.9	Rmdn2	chr17	protein_coding	regulator of microtubule dynamics 2
chr17	79934231	79957731	+	79935808	79957731	A5SS&ES	0.33	50	50	ENSMUST00000086570.3	ENSMUSG00000036368.9	Rmdn2	chr17	protein_coding	regulator of microtubule dynamics 2
chr17	79934231	79957731	+	79934231	79934891	3pMXE	0.5	50	50	ENSMUST00000223555.2	ENSMUSG00000036368.9	Rmdn2	chr17	protein_coding	regulator of microtubule dynamics 2
chr17	79989111	79992095	+	79989111	80000520	A3SS	0.5	50	50	ENSMUST00000226004.2	ENSMUSG00000036368.9	Rmdn2	chr17	protein_coding	regulator of microtubule dynamics 2
chr17	80172605	80203338	-	80172605;80183475	80183231;80203338	ES	0.5	50	50	ENSMUST00000068282.7	ENSMUSG00000059811.14	Atl2	chr17	protein_coding	atlastin GTPase 2
chr17	80157707;80159218	80159144;80159954	-	80157707	80159954	cassetteExon	0.5	100	100	ENSMUST00000068282.7	ENSMUSG00000059811.14	Atl2	chr17	protein_coding	atlastin GTPase 2
chr17	80158330	80159954	-	80157707	80159954	A3SS	0.33	50	50	ENSMUST00000068282.7	ENSMUSG00000059811.14	Atl2	chr17	protein_coding	atlastin GTPase 2
chr17	80159218	80159954	-	80158330	80159954	A3SS	0.33	50	50	ENSMUST00000222193.2	ENSMUSG00000059811.14	Atl2	chr17	protein_coding	atlastin GTPase 2
chr17	80172605	80203338	-	80183475	80203338	3pMXE	0.5	50	50	ENSMUST00000222243.2	ENSMUSG00000059811.14	Atl2	chr17	protein_coding	atlastin GTPase 2
chr17	80358294	80369086	-	80358294;80361070	80360952;80369086	ES	0.5	50	50	ENSMUST00000184635.8	ENSMUSG00000024095.16	Hnrnpll	chr17	protein_coding	heterogeneous nuclear ribonucleoprotein L-like
chr17	80351994;80352451	80352369;80356037	-	80351994	80356037	cassetteExon	0.5	100	100	ENSMUST00000184635.8	ENSMUSG00000024095.16	Hnrnpll	chr17	protein_coding	heterogeneous nuclear ribonucleoprotein L-like
chr17	80358294	80369086	-	80361070	80369086	3pMXE	0.5	50	50	ENSMUST00000184726.2	ENSMUSG00000024095.16	Hnrnpll	chr17	protein_coding	heterogeneous nuclear ribonucleoprotein L-like
chr17	80509031	80510120	-	80509031;80509633	80509598;80510120	ES	0.5	50	50	ENSMUST00000063417.11	ENSMUSG00000024097.12	Srsf7	chr17	protein_coding	serine and arginine-rich splicing factor 7
chr17	80511816;80512510	80512051;80512691	-	80511816	80512691	cassetteExon	0.5	100	100	ENSMUST00000063417.11	ENSMUSG00000024097.12	Srsf7	chr17	protein_coding	serine and arginine-rich splicing factor 7
chr17	80510173	80511560	-	80510173	80511551	A5SS	0.33	50	50	ENSMUST00000063417.11	ENSMUSG00000024097.12	Srsf7	chr17	protein_coding	serine and arginine-rich splicing factor 7
chr17	80510173	80511584	-	80510173	80511551	A5SS	0.33	50	50	ENSMUST00000063417.11	ENSMUSG00000024097.12	Srsf7	chr17	protein_coding	serine and arginine-rich splicing factor 7
chr17	80513457	80513996	-	80513457	80514604	A5SS	0.5	50	50	ENSMUST00000063417.11	ENSMUSG00000024097.12	Srsf7	chr17	protein_coding	serine and arginine-rich splicing factor 7
chr17	80510173	80511584	-	80510173	80511560	A5SS	0.33	50	50	ENSMUST00000234503.2	ENSMUSG00000024097.12	Srsf7	chr17	protein_coding	serine and arginine-rich splicing factor 7
chr17	80533193	80535167	+	80533193	80533954	3pMXE	0.5	50	50	ENSMUST00000156869.2	ENSMUSG00000055760.13	Gemin6	chr17	protein_coding	gem nuclear organelle associated protein 6
chr17	80583464;80585810	80585652;80588625	-	80583464	80588625	cassetteExon	0.5	100	100	ENSMUST00000038166.9	ENSMUSG00000035051.16	Dhx57	chr17	protein_coding	DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
chr17	80588857	80597156	-	80588857	80597485	A5SS	0.5	50	50	ENSMUST00000038166.9	ENSMUSG00000035051.16	Dhx57	chr17	protein_coding	DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
chr17	80572638	80577796	-	80572638	80574944	5pMXE	0.5	50	50	ENSMUST00000235024.2	ENSMUSG00000035051.16	Dhx57	chr17	protein_coding	DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
chr17	80576376	80577796	-	80572638	80577796	A3SS	0.5	50	50	ENSMUST00000234703.2	ENSMUSG00000035051.16	Dhx57	chr17	protein_coding	DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
chr17	80678864	80688767	+	80678864;80681222	80680421;80688767	ES	0.5	50	50	ENSMUST00000223878.2	ENSMUSG00000054901.8	Arhgef33	chr17	protein_coding	Rho guanine nucleotide exchange factor (GEF) 33
chr17	80688906	80695636	+	80688906;80693870	80693796;80695636	ES	0.5	50	50	ENSMUST00000223878.2	ENSMUSG00000054901.8	Arhgef33	chr17	protein_coding	Rho guanine nucleotide exchange factor (GEF) 33
chr17	80614945;80620598	80620527;80642662	+	80614945	80642662	cassetteExon	0.5	100	100	ENSMUST00000223878.2	ENSMUSG00000054901.8	Arhgef33	chr17	protein_coding	Rho guanine nucleotide exchange factor (GEF) 33
chr17	80688906	80691648	+	80688906	80693796	A3SS	0.25	50	50	ENSMUST00000223878.2	ENSMUSG00000054901.8	Arhgef33	chr17	protein_coding	Rho guanine nucleotide exchange factor (GEF) 33
chr17	80688906	80695018	+	80688906	80693796	A3SS&ES	0.25	50	50	ENSMUST00000223878.2	ENSMUSG00000054901.8	Arhgef33	chr17	protein_coding	Rho guanine nucleotide exchange factor (GEF) 33
chr17	80693870	80695031	+	80693870	80695636	A3SS	0.33	50	50	ENSMUST00000223878.2	ENSMUSG00000054901.8	Arhgef33	chr17	protein_coding	Rho guanine nucleotide exchange factor (GEF) 33
chr17	80693870	80695629	+	80693870	80695636	A3SS	0.33	50	50	ENSMUST00000223878.2	ENSMUSG00000054901.8	Arhgef33	chr17	protein_coding	Rho guanine nucleotide exchange factor (GEF) 33
chr17	80688906	80695636	+	80688906	80693796	A3SS&ES	0.25	50	50	ENSMUST00000068175.6	ENSMUSG00000054901.8	Arhgef33	chr17	protein_coding	Rho guanine nucleotide exchange factor (GEF) 33
chr17	80693870	80695031	+	80693870	80695629	A3SS	0.33	50	50	ENSMUST00000068175.6	ENSMUSG00000054901.8	Arhgef33	chr17	protein_coding	Rho guanine nucleotide exchange factor (GEF) 33
chr17	80688906	80707366	+	80688906	80695636	3pMXE	0.2	50	50	ENSMUST00000224676.2	ENSMUSG00000054901.8	Arhgef33	chr17	protein_coding	Rho guanine nucleotide exchange factor (GEF) 33
chr17	80678864	80680421	+	80678864	80688767	A3SS	0.5	50	50	ENSMUST00000224676.2	ENSMUSG00000054901.8	Arhgef33	chr17	protein_coding	Rho guanine nucleotide exchange factor (GEF) 33
chr17	80688906	80691648	+	80688906	80695636	A3SS	0.2	50	50	ENSMUST00000224676.2	ENSMUSG00000054901.8	Arhgef33	chr17	protein_coding	Rho guanine nucleotide exchange factor (GEF) 33
chr17	80688906	80695018	+	80688906	80695636	A3SS	0.2	50	50	ENSMUST00000224676.2	ENSMUSG00000054901.8	Arhgef33	chr17	protein_coding	Rho guanine nucleotide exchange factor (GEF) 33
chr17	80681222	80688767	+	80678864	80688767	A5SS	0.5	50	50	ENSMUST00000224676.2	ENSMUSG00000054901.8	Arhgef33	chr17	protein_coding	Rho guanine nucleotide exchange factor (GEF) 33
chr17	80688906	80707366	+	80688906	80695018	3pMXE	0.2	50	50	ENSMUST00000224966.3	ENSMUSG00000054901.8	Arhgef33	chr17	protein_coding	Rho guanine nucleotide exchange factor (GEF) 33
chr17	80688906	80691648	+	80688906	80695018	A3SS	0.2	50	50	ENSMUST00000224966.3	ENSMUSG00000054901.8	Arhgef33	chr17	protein_coding	Rho guanine nucleotide exchange factor (GEF) 33
chr17	80688906	80707366	+	80688906	80691648	3pMXE	0.2	50	50	ENSMUST00000225548.3	ENSMUSG00000054901.8	Arhgef33	chr17	protein_coding	Rho guanine nucleotide exchange factor (GEF) 33
chr17	80688906	80693796	+	80688906	80707366	A3SS	0.2	50	50	ENSMUST00000226013.2	ENSMUSG00000054901.8	Arhgef33	chr17	protein_coding	Rho guanine nucleotide exchange factor (GEF) 33
chr17	80868003	80884761	-	80868003	80871154	5pMXE	0.33	50	50	ENSMUST00000086545.5	ENSMUSG00000033966.9	Cdkl4	chr17	protein_coding	cyclin-dependent kinase-like 4
chr17	80868003	80884986	-	80868003	80871154	5pMXE	0.33	50	50	ENSMUST00000086545.5	ENSMUSG00000033966.9	Cdkl4	chr17	protein_coding	cyclin-dependent kinase-like 4
chr17	80868003	80884761	-	80868003	80884986	A5SS	0.33	50	50	ENSMUST00000234602.2	ENSMUSG00000033966.9	Cdkl4	chr17	protein_coding	cyclin-dependent kinase-like 4
chr17	80931543	80937844	-	80931543;80936777	80936715;80937844	ES	0.5	50	50	ENSMUST00000112389.9	ENSMUSG00000024242.16	Map4k3	chr17	protein_coding	mitogen-activated protein kinase kinase kinase kinase 3
chr17	80900588	80904982	-	80900588	80900713	A5SS&ES	0.5	50	50	ENSMUST00000112389.9	ENSMUSG00000024242.16	Map4k3	chr17	protein_coding	mitogen-activated protein kinase kinase kinase kinase 3
chr17	81204386;81230141	81230072;81230596	+	81204386	81230596	cassetteExon	0.5	100	100	ENSMUST00000220322.2	ENSMUSG00000112121.2	C230072F16Rik	chr17	lncRNA	RIKEN cDNA C230072F16 gene
chr17	81231030;81232449	81232371;81234197	+	81231030	81234197	cassetteExon	0.5	100	100	ENSMUST00000220322.2	ENSMUSG00000112121.2	C230072F16Rik	chr17	lncRNA	RIKEN cDNA C230072F16 gene
chr17	81334399;81338443	81338053;81340061	-	81334399	81340061	cassetteExon	0.5	100	100	ENSMUST00000025093.6	ENSMUSG00000024246.10	Thumpd2	chr17	protein_coding	THUMP domain containing 2
chr17	81745242;81749095	81749081;81749202	-	81745242	81749202	cassetteExon	0.5	100	100	ENSMUST00000234131.2	ENSMUSG00000054640.16	Slc8a1	chr17	protein_coding	solute carrier family 8 (sodium/calcium exchanger), member 1
chr17	81749219;81749310	81749290;81752916	-	81749219	81752916	cassetteExon	0.5	100	100	ENSMUST00000234131.2	ENSMUSG00000054640.16	Slc8a1	chr17	protein_coding	solute carrier family 8 (sodium/calcium exchanger), member 1
chr17	81749219;81749652	81749290;81752916	-	81749219	81752916	cassetteExon	0.5	100	100	ENSMUST00000234131.2	ENSMUSG00000054640.16	Slc8a1	chr17	protein_coding	solute carrier family 8 (sodium/calcium exchanger), member 1
chr17	81749219;81749652	81749632;81752916	-	81749219	81752916	cassetteExon	0.5	100	100	ENSMUST00000234131.2	ENSMUSG00000054640.16	Slc8a1	chr17	protein_coding	solute carrier family 8 (sodium/calcium exchanger), member 1
chr17	81749219;81749310	81749290;81752916	-	81749219;81749652	81749632;81752916	MXE	0.5	100	100	ENSMUST00000235015.2	ENSMUSG00000054640.16	Slc8a1	chr17	protein_coding	solute carrier family 8 (sodium/calcium exchanger), member 1
chr17	81957067	81977430	-	81957067	82045738	A5SS	0.5	50	50	ENSMUST00000235015.2	ENSMUSG00000054640.16	Slc8a1	chr17	protein_coding	solute carrier family 8 (sodium/calcium exchanger), member 1
chr17	83409388	83423023	-	83409388	83428126	A5SS	0.5	50	50	ENSMUST00000235082.2	ENSMUSG00000117509.2	Gm46606	chr17	lncRNA	predicted gene, 46606
chr17	83527585	83528482	+	83527585	83528395	A3SS	0.5	50	50	ENSMUST00000170794.8	ENSMUSG00000024247.15	Pkdcc	chr17	protein_coding	protein kinase domain containing, cytoplasmic
chr17	83528666	83528906	+	83528666	83529219	A3SS	0.5	50	50	ENSMUST00000170794.8	ENSMUSG00000024247.15	Pkdcc	chr17	protein_coding	protein kinase domain containing, cytoplasmic
chr17	83529627	83531212	+	83529659	83531212	A5SS	0.5	50	50	ENSMUST00000170794.8	ENSMUSG00000024247.15	Pkdcc	chr17	protein_coding	protein kinase domain containing, cytoplasmic
chr17	83729164	83734652	+	83729164;83732860	83732687;83734652	ES	0.5	50	50	ENSMUST00000096766.12	ENSMUSG00000032624.17	Eml4	chr17	protein_coding	echinoderm microtubule associated protein like 4
chr17	83735454	83747460	+	83735454;83735677	83735645;83747460	ES	0.5	50	50	ENSMUST00000096766.12	ENSMUSG00000032624.17	Eml4	chr17	protein_coding	echinoderm microtubule associated protein like 4
chr17	83658668;83712668	83712592;83717455	+	83658668	83717455	cassetteExon	0.5	100	100	ENSMUST00000096766.12	ENSMUSG00000032624.17	Eml4	chr17	protein_coding	echinoderm microtubule associated protein like 4
chr17	83729164;83734780	83734652;83735429	+	83729164	83735429	cassetteExon	0.5	100	100	ENSMUST00000049503.10	ENSMUSG00000032624.17	Eml4	chr17	protein_coding	echinoderm microtubule associated protein like 4
chr17	83729164	83732687	+	83729164	83735429	A3SS	0.33	50	50	ENSMUST00000049503.10	ENSMUSG00000032624.17	Eml4	chr17	protein_coding	echinoderm microtubule associated protein like 4
chr17	83811657	83824705	-	83811657	83821633	5pMXE	0.5	50	50	ENSMUST00000025095.9	ENSMUSG00000024248.15	Cox7a2l	chr17	protein_coding	cytochrome c oxidase subunit 7A2 like
chr17	83810166;83811428	83811360;83811529	-	83810166	83811529	cassetteExon	0.5	100	100	ENSMUST00000025095.9	ENSMUSG00000024248.15	Cox7a2l	chr17	protein_coding	cytochrome c oxidase subunit 7A2 like
chr17	83895808	83938392	-	83895808	83938425	A5SS	0.5	50	50	ENSMUST00000234613.2	ENSMUSG00000045053.3	Kcng3	chr17	protein_coding	potassium voltage-gated channel, subfamily G, member 3
chr17	84013714	84022043	+	84013714;84015895	84015828;84022043	ES	0.5	50	50	ENSMUST00000112350.8	ENSMUSG00000055817.19	Mta3	chr17	protein_coding	metastasis associated 3
chr17	84063105	84070343	+	84063105	84070340	A3SS	0.5	50	50	ENSMUST00000112350.8	ENSMUSG00000055817.19	Mta3	chr17	protein_coding	metastasis associated 3
chr17	84091764	84096347	+	84091764	84096350	A3SS	0.5	50	50	ENSMUST00000112350.8	ENSMUSG00000055817.19	Mta3	chr17	protein_coding	metastasis associated 3
chr17	84036956	84045758	+	84022136	84045758	A5SS	0.5	50	50	ENSMUST00000112350.8	ENSMUSG00000055817.19	Mta3	chr17	protein_coding	metastasis associated 3
chr17	84103115	84107479	+	84100193	84107479	A5SS	0.33	50	50	ENSMUST00000112352.10	ENSMUSG00000055817.19	Mta3	chr17	protein_coding	metastasis associated 3
chr17	84112026	84127609	+	84112026;84125981	84125791;84127609	ES	0.5	50	50	ENSMUST00000177069.8	ENSMUSG00000055817.19	Mta3	chr17	protein_coding	metastasis associated 3
chr17	84112026	84122065	+	84112026	84125791	A3SS	0.33	50	50	ENSMUST00000177069.8	ENSMUSG00000055817.19	Mta3	chr17	protein_coding	metastasis associated 3
chr17	84112026	84127609	+	84112026	84122065	3pMXE	0.33	50	50	ENSMUST00000067826.15	ENSMUSG00000055817.19	Mta3	chr17	protein_coding	metastasis associated 3
chr17	84096471	84099082	+	84096471	84107479	A3SS	0.5	50	50	ENSMUST00000176816.8	ENSMUSG00000055817.19	Mta3	chr17	protein_coding	metastasis associated 3
chr17	84100193	84107479	+	84096471	84107479	A5SS	0.33	50	50	ENSMUST00000176816.8	ENSMUSG00000055817.19	Mta3	chr17	protein_coding	metastasis associated 3
chr17	84103115	84107479	+	84096471	84107479	A5SS	0.33	50	50	ENSMUST00000176816.8	ENSMUSG00000055817.19	Mta3	chr17	protein_coding	metastasis associated 3
chr17	84146313;84150376	84150280;84150625	-	84146313	84150625	cassetteExon	0.5	100	100	ENSMUST00000000687.9	ENSMUSG00000000673.10	Haao	chr17	protein_coding	3-hydroxyanthranilate 3,4-dioxygenase
chr17	84150767	84154066	-	84150703	84154066	A3SS	0.5	50	50	ENSMUST00000000687.9	ENSMUSG00000000673.10	Haao	chr17	protein_coding	3-hydroxyanthranilate 3,4-dioxygenase
chr17	84146313	84150625	-	84139824	84150625	A3SS	0.33	50	50	ENSMUST00000234214.2	ENSMUSG00000000673.10	Haao	chr17	protein_coding	3-hydroxyanthranilate 3,4-dioxygenase
chr17	84150376	84150625	-	84139824	84150625	A3SS	0.33	50	50	ENSMUST00000234214.2	ENSMUSG00000000673.10	Haao	chr17	protein_coding	3-hydroxyanthranilate 3,4-dioxygenase
chr17	84139824	84142208	-	84139824	84150625	A5SS	0.5	50	50	ENSMUST00000234214.2	ENSMUSG00000000673.10	Haao	chr17	protein_coding	3-hydroxyanthranilate 3,4-dioxygenase
chr17	84160403	84161645	-	84160542	84161645	A3SS	0.5	50	50	ENSMUST00000180515.2	ENSMUSG00000097254.3	C430042M11Rik	chr17	lncRNA	RIKEN cDNA C430042M11 gene
chr17	84319228	84320556	+	84306134	84320556	A5SS	0.5	50	50	ENSMUST00000234981.2	ENSMUSG00000117431.2	8430430B14Rik	chr17	lncRNA	RIKEN cDNA 8430430B14 gene
chr17	84442980	84463668	-	84442980	84447149	5pMXE	0.25	50	50	ENSMUST00000234741.2	ENSMUSG00000117485.2	Gm19696	chr17	lncRNA	predicted gene, 19696
chr17	84442980	84443364	-	84442980	84447149	A5SS	0.25	50	50	ENSMUST00000234741.2	ENSMUSG00000117485.2	Gm19696	chr17	lncRNA	predicted gene, 19696
chr17	84442980	84443763	-	84442980	84447149	A5SS	0.25	50	50	ENSMUST00000234741.2	ENSMUSG00000117485.2	Gm19696	chr17	lncRNA	predicted gene, 19696
chr17	84442980	84443763	-	84442980	84443364	5pMXE	0.25	50	50	ENSMUST00000234322.2	ENSMUSG00000117485.2	Gm19696	chr17	lncRNA	predicted gene, 19696
chr17	84442980	84463668	-	84442980	84443364	5pMXE	0.25	50	50	ENSMUST00000234322.2	ENSMUSG00000117485.2	Gm19696	chr17	lncRNA	predicted gene, 19696
chr17	84444379	84444896	-	84444379	84444478	5pMXE	0.5	50	50	ENSMUST00000234314.2	ENSMUSG00000117485.2	Gm19696	chr17	lncRNA	predicted gene, 19696
chr17	84444019	84444307	-	84444103	84444307	A3SS	0.5	50	50	ENSMUST00000234314.2	ENSMUSG00000117485.2	Gm19696	chr17	lncRNA	predicted gene, 19696
chr17	84444103	84444622	-	84444103	84444307	A5SS&ES	0.5	50	50	ENSMUST00000234314.2	ENSMUSG00000117485.2	Gm19696	chr17	lncRNA	predicted gene, 19696
chr17	84444379;84444684	84444478;84444896	-	84444379	84444896	cassetteExon	0.5	100	100	ENSMUST00000234195.2	ENSMUSG00000117485.2	Gm19696	chr17	lncRNA	predicted gene, 19696
chr17	84460283	84463668	-	84442980	84463668	A3SS	0.5	50	50	ENSMUST00000234659.2	ENSMUSG00000117485.2	Gm19696	chr17	lncRNA	predicted gene, 19696
chr17	84442980	84443763	-	84442980	84463668	A5SS	0.25	50	50	ENSMUST00000234659.2	ENSMUSG00000117485.2	Gm19696	chr17	lncRNA	predicted gene, 19696
chr17	84444103;84444379	84444307;84444896	-	84444103;84444684	84444622;84444896	MXE	0.5	100	100	ENSMUST00000234492.2	ENSMUSG00000117485.2	Gm19696	chr17	lncRNA	predicted gene, 19696
chr17	84444103	84444307	-	84444103	84453641	A5SS	0.33	50	50	ENSMUST00000234394.2	ENSMUSG00000117485.2	Gm19696	chr17	lncRNA	predicted gene, 19696
chr17	84444103	84444622	-	84444103	84453641	A5SS	0.33	50	50	ENSMUST00000234394.2	ENSMUSG00000117485.2	Gm19696	chr17	lncRNA	predicted gene, 19696
chr17	84611825	84617315	-	84580252	84617315	A3SS	0.33	50	50	ENSMUST00000047524.10	ENSMUSG00000024251.11	Thada	chr17	protein_coding	thyroid adenoma associated
chr17	84617173	84617315	-	84580252	84617315	A3SS	0.33	50	50	ENSMUST00000047524.10	ENSMUSG00000024251.11	Thada	chr17	protein_coding	thyroid adenoma associated
chr17	84751978	84753933	-	84751937	84753933	A3SS	0.5	50	50	ENSMUST00000047524.10	ENSMUSG00000024251.11	Thada	chr17	protein_coding	thyroid adenoma associated
chr17	84617483	84620952	-	84617483	84641454	A5SS	0.5	50	50	ENSMUST00000047524.10	ENSMUSG00000024251.11	Thada	chr17	protein_coding	thyroid adenoma associated
chr17	84644310	84676075	-	84644310	84693939	A5SS	0.5	50	50	ENSMUST00000047524.10	ENSMUSG00000024251.11	Thada	chr17	protein_coding	thyroid adenoma associated
chr17	84617173	84617315	-	84611825	84617315	A3SS	0.33	50	50	ENSMUST00000234134.2	ENSMUSG00000024251.11	Thada	chr17	protein_coding	thyroid adenoma associated
chr17	84854212	84874072	-	84854212	84858592	5pMXE	0.5	50	50	ENSMUST00000234638.2	ENSMUSG00000117391.2	4930500A05Rik	chr17	lncRNA	RIKEN cDNA 4930500A05 gene
chr17	84981083	84981678	-	84981083	84983449	A5SS	0.5	50	50	ENSMUST00000066175.10	ENSMUSG00000040505.14	Abcg5	chr17	protein_coding	ATP binding cassette subfamily G member 5
chr17	84979721	84980951	-	84977863	84980951	A3SS	0.5	50	50	ENSMUST00000163375.2	ENSMUSG00000040505.14	Abcg5	chr17	protein_coding	ATP binding cassette subfamily G member 5
chr17	84977863	84978550	-	84977863	84980951	A5SS	0.5	50	50	ENSMUST00000163375.2	ENSMUSG00000040505.14	Abcg5	chr17	protein_coding	ATP binding cassette subfamily G member 5
chr17	84994149;84996116	84995960;84999228	+	84994149	84999228	cassetteExon	0.5	100	100	ENSMUST00000170725.8	ENSMUSG00000024254.16	Abcg8	chr17	protein_coding	ATP binding cassette subfamily G member 8
chr17	84990722	84994048	+	84983811	84994048	A5SS	0.5	50	50	ENSMUST00000170725.8	ENSMUSG00000024254.16	Abcg8	chr17	protein_coding	ATP binding cassette subfamily G member 8
chr17	84990722	84994048	+	84990722	84994045	A3SS	0.5	50	50	ENSMUST00000045714.15	ENSMUSG00000024254.16	Abcg8	chr17	protein_coding	ATP binding cassette subfamily G member 8
chr17	85047604	85056389	-	85047604;85048096	85047972;85056389	ES	0.5	50	50	ENSMUST00000112308.9	ENSMUSG00000024120.13	Lrpprc	chr17	protein_coding	leucine-rich PPR-motif containing
chr17	85020322;85020625	85020436;85024055	-	85020322	85024055	cassetteExon	0.5	100	100	ENSMUST00000112308.9	ENSMUSG00000024120.13	Lrpprc	chr17	protein_coding	leucine-rich PPR-motif containing
chr17	85080530	85080632	-	85080530	85080636	A5SS	0.5	50	50	ENSMUST00000112308.9	ENSMUSG00000024120.13	Lrpprc	chr17	protein_coding	leucine-rich PPR-motif containing
chr17	85084562	85084925	-	85084562	85097793	A5SS	0.5	50	50	ENSMUST00000112308.9	ENSMUSG00000024120.13	Lrpprc	chr17	protein_coding	leucine-rich PPR-motif containing
chr17	85262736	85264628	-	85256482	85264628	A3SS	0.5	50	50	ENSMUST00000234288.2	ENSMUSG00000097047.3	1110020A21Rik	chr17	lncRNA	RIKEN cDNA 1110020A21 gene
chr17	85262736	85264628	-	85262736	85264581	A5SS	0.5	50	50	ENSMUST00000234932.2	ENSMUSG00000097047.3	1110020A21Rik	chr17	lncRNA	RIKEN cDNA 1110020A21 gene
chr17	85312994;85330507	85330460;85331124	+	85312994	85331124	cassetteExon	0.5	100	100	ENSMUST00000112305.10	ENSMUSG00000061130.14	Ppm1b	chr17	protein_coding	protein phosphatase 1B, magnesium dependent, beta isoform
chr17	85312994	85320994	+	85312994	85331124	A3SS	0.25	50	50	ENSMUST00000112305.10	ENSMUSG00000061130.14	Ppm1b	chr17	protein_coding	protein phosphatase 1B, magnesium dependent, beta isoform
chr17	85312994	85322837	+	85312994	85331124	A3SS	0.25	50	50	ENSMUST00000112305.10	ENSMUSG00000061130.14	Ppm1b	chr17	protein_coding	protein phosphatase 1B, magnesium dependent, beta isoform
chr17	85265822	85301108	+	85264315	85301108	A5SS	0.33	50	50	ENSMUST00000112305.10	ENSMUSG00000061130.14	Ppm1b	chr17	protein_coding	protein phosphatase 1B, magnesium dependent, beta isoform
chr17	85281549	85301108	+	85264315	85301108	A5SS	0.33	50	50	ENSMUST00000112305.10	ENSMUSG00000061130.14	Ppm1b	chr17	protein_coding	protein phosphatase 1B, magnesium dependent, beta isoform
chr17	85312994	85322837	+	85312994	85320994	3pMXE	0.25	50	50	ENSMUST00000080217.14	ENSMUSG00000061130.14	Ppm1b	chr17	protein_coding	protein phosphatase 1B, magnesium dependent, beta isoform
chr17	85312994	85330460	+	85312994	85320994	3pMXE	0.25	50	50	ENSMUST00000080217.14	ENSMUSG00000061130.14	Ppm1b	chr17	protein_coding	protein phosphatase 1B, magnesium dependent, beta isoform
chr17	85281549	85301108	+	85265822	85301108	A5SS	0.33	50	50	ENSMUST00000080217.14	ENSMUSG00000061130.14	Ppm1b	chr17	protein_coding	protein phosphatase 1B, magnesium dependent, beta isoform
chr17	85312994	85330460	+	85312994	85322837	3pMXE	0.25	50	50	ENSMUST00000112304.10	ENSMUSG00000061130.14	Ppm1b	chr17	protein_coding	protein phosphatase 1B, magnesium dependent, beta isoform
chr17	85312994;85322863	85322837;85330460	+	85312994	85330460	cassetteExon	0.5	100	100	ENSMUST00000234540.2	ENSMUSG00000061130.14	Ppm1b	chr17	protein_coding	protein phosphatase 1B, magnesium dependent, beta isoform
chr17	85390743;85395870	85395768;85397534	-	85390743	85397534	cassetteExon	0.5	100	100	ENSMUST00000072406.5	ENSMUSG00000024127.16	Prepl	chr17	protein_coding	prolyl endopeptidase-like
chr17	85396303	85397534	-	85390743	85397534	A3SS	0.33	50	50	ENSMUST00000072406.5	ENSMUSG00000024127.16	Prepl	chr17	protein_coding	prolyl endopeptidase-like
chr17	85390743	85397534	-	85390743;85396303	85395768;85397534	ES	0.33	50	50	ENSMUST00000171795.9	ENSMUSG00000024127.16	Prepl	chr17	protein_coding	prolyl endopeptidase-like
chr17	85395870	85397534	-	85396303	85397534	A3SS	0.33	50	50	ENSMUST00000171795.9	ENSMUSG00000024127.16	Prepl	chr17	protein_coding	prolyl endopeptidase-like
chr17	85421275	85468318	+	85421275	85699001	A3SS	0.33	50	50	ENSMUST00000095188.7	ENSMUSG00000071037.7	Camkmt	chr17	protein_coding	calmodulin-lysine N-methyltransferase
chr17	85421275	85510205	+	85421275	85699001	A3SS	0.33	50	50	ENSMUST00000095188.7	ENSMUSG00000071037.7	Camkmt	chr17	protein_coding	calmodulin-lysine N-methyltransferase
chr17	85399619	85403918	+	85398291	85403918	A5SS	0.5	50	50	ENSMUST00000095188.7	ENSMUSG00000071037.7	Camkmt	chr17	protein_coding	calmodulin-lysine N-methyltransferase
chr17	85421275	85468318	+	85421275	85510205	A3SS	0.33	50	50	ENSMUST00000234822.2	ENSMUSG00000071037.7	Camkmt	chr17	protein_coding	calmodulin-lysine N-methyltransferase
chr17	85917099	85922076	-	85910114	85922076	A3SS	0.2	50	50	ENSMUST00000175921.4	ENSMUSG00000093460.10	Six3os1	chr17	lncRNA	SIX homeobox 3, opposite strand 1
chr17	85919176	85922076	-	85910114	85922076	A3SS	0.2	50	50	ENSMUST00000175921.4	ENSMUSG00000093460.10	Six3os1	chr17	lncRNA	SIX homeobox 3, opposite strand 1
chr17	85920418	85922076	-	85910114	85922076	A3SS	0.2	50	50	ENSMUST00000175921.4	ENSMUSG00000093460.10	Six3os1	chr17	lncRNA	SIX homeobox 3, opposite strand 1
chr17	85921334	85922076	-	85910114	85922076	A3SS	0.2	50	50	ENSMUST00000175921.4	ENSMUSG00000093460.10	Six3os1	chr17	lncRNA	SIX homeobox 3, opposite strand 1
chr17	85923171;85925062	85924710;85925485	-	85923171	85925485	cassetteExon	0.5	100	100	ENSMUST00000161146.10	ENSMUSG00000093460.10	Six3os1	chr17	lncRNA	SIX homeobox 3, opposite strand 1
chr17	85915326	85923022	-	85922120	85923022	A3SS&ES	0.2	50	50	ENSMUST00000161146.10	ENSMUSG00000093460.10	Six3os1	chr17	lncRNA	SIX homeobox 3, opposite strand 1
chr17	85919176	85923022	-	85922120	85923022	A3SS&ES	0.2	50	50	ENSMUST00000161146.10	ENSMUSG00000093460.10	Six3os1	chr17	lncRNA	SIX homeobox 3, opposite strand 1
chr17	85919338	85923022	-	85922120	85923022	A3SS&ES	0.2	50	50	ENSMUST00000161146.10	ENSMUSG00000093460.10	Six3os1	chr17	lncRNA	SIX homeobox 3, opposite strand 1
chr17	85922155	85923022	-	85922120	85923022	A3SS	0.2	50	50	ENSMUST00000161146.10	ENSMUSG00000093460.10	Six3os1	chr17	lncRNA	SIX homeobox 3, opposite strand 1
chr17	85923262	85925485	-	85923171	85925485	A3SS	0.33	50	50	ENSMUST00000161146.10	ENSMUSG00000093460.10	Six3os1	chr17	lncRNA	SIX homeobox 3, opposite strand 1
chr17	85919176	85923022	-	85915326	85923022	A3SS	0.2	50	50	ENSMUST00000176958.2	ENSMUSG00000093460.10	Six3os1	chr17	lncRNA	SIX homeobox 3, opposite strand 1
chr17	85919338	85923022	-	85915326	85923022	A3SS	0.2	50	50	ENSMUST00000176958.2	ENSMUSG00000093460.10	Six3os1	chr17	lncRNA	SIX homeobox 3, opposite strand 1
chr17	85922155	85923022	-	85915326	85923022	A3SS	0.2	50	50	ENSMUST00000176958.2	ENSMUSG00000093460.10	Six3os1	chr17	lncRNA	SIX homeobox 3, opposite strand 1
chr17	85923171	85925485	-	85925062	85925485	A3SS	0.33	50	50	ENSMUST00000176958.2	ENSMUSG00000093460.10	Six3os1	chr17	lncRNA	SIX homeobox 3, opposite strand 1
chr17	85923262	85925485	-	85925062	85925485	A3SS	0.33	50	50	ENSMUST00000176958.2	ENSMUSG00000093460.10	Six3os1	chr17	lncRNA	SIX homeobox 3, opposite strand 1
chr17	85917099	85922076	-	85920418	85922076	A3SS	0.2	50	50	ENSMUST00000177220.8	ENSMUSG00000093460.10	Six3os1	chr17	lncRNA	SIX homeobox 3, opposite strand 1
chr17	85919176	85922076	-	85920418	85922076	A3SS	0.2	50	50	ENSMUST00000177220.8	ENSMUSG00000093460.10	Six3os1	chr17	lncRNA	SIX homeobox 3, opposite strand 1
chr17	85921334	85922076	-	85920418	85922076	A3SS	0.2	50	50	ENSMUST00000177220.8	ENSMUSG00000093460.10	Six3os1	chr17	lncRNA	SIX homeobox 3, opposite strand 1
chr17	85919176	85922076	-	85917099	85922076	A3SS	0.2	50	50	ENSMUST00000176917.8	ENSMUSG00000093460.10	Six3os1	chr17	lncRNA	SIX homeobox 3, opposite strand 1
chr17	85921334	85922076	-	85917099	85922076	A3SS	0.2	50	50	ENSMUST00000176917.8	ENSMUSG00000093460.10	Six3os1	chr17	lncRNA	SIX homeobox 3, opposite strand 1
chr17	85919176	85923022	-	85919338	85923022	A3SS	0.2	50	50	ENSMUST00000159030.8	ENSMUSG00000093460.10	Six3os1	chr17	lncRNA	SIX homeobox 3, opposite strand 1
chr17	85922155	85923022	-	85919338	85923022	A3SS	0.2	50	50	ENSMUST00000159030.8	ENSMUSG00000093460.10	Six3os1	chr17	lncRNA	SIX homeobox 3, opposite strand 1
chr17	85919176	85922076	-	85921334	85922076	A3SS	0.2	50	50	ENSMUST00000176556.2	ENSMUSG00000093460.10	Six3os1	chr17	lncRNA	SIX homeobox 3, opposite strand 1
chr17	85919176	85923022	-	85919176;85922155	85922076;85923022	ES	0.25	50	50	ENSMUST00000176432.8	ENSMUSG00000093460.10	Six3os1	chr17	lncRNA	SIX homeobox 3, opposite strand 1
chr17	85919176;85922120	85922076;85923022	-	85919176	85923022	cassetteExon	0.5	100	100	ENSMUST00000177487.2	ENSMUSG00000093460.10	Six3os1	chr17	lncRNA	SIX homeobox 3, opposite strand 1
chr17	86309035;86311381	86311275;86347720	-	86309035	86347720	cassetteExon	0.5	100	100	ENSMUST00000234761.2	ENSMUSG00000024135.11	Srbd1	chr17	protein_coding	S1 RNA binding domain 1
chr17	86410428	86422621	-	86410428;86416762	86416655;86422621	ES	0.5	50	50	ENSMUST00000095187.4	ENSMUSG00000024135.11	Srbd1	chr17	protein_coding	S1 RNA binding domain 1
chr17	86355947	86358514	-	86311381	86358514	A3SS	0.5	50	50	ENSMUST00000095187.4	ENSMUSG00000024135.11	Srbd1	chr17	protein_coding	S1 RNA binding domain 1
chr17	86295937	86347720	-	86295937	86307749	A5SS&ES	0.5	50	50	ENSMUST00000095187.4	ENSMUSG00000024135.11	Srbd1	chr17	protein_coding	S1 RNA binding domain 1
chr17	86309035	86347720	-	86309035	86311275	A5SS&ES	0.5	50	50	ENSMUST00000095187.4	ENSMUSG00000024135.11	Srbd1	chr17	protein_coding	S1 RNA binding domain 1
chr17	86311381	86347720	-	86311381	86358514	A5SS	0.5	50	50	ENSMUST00000095187.4	ENSMUSG00000024135.11	Srbd1	chr17	protein_coding	S1 RNA binding domain 1
chr17	86427477	86427582	-	86427477	86428078	A5SS	0.5	50	50	ENSMUST00000095187.4	ENSMUSG00000024135.11	Srbd1	chr17	protein_coding	S1 RNA binding domain 1
chr17	86309035	86347720	-	86295937	86347720	A3SS	0.33	50	50	ENSMUST00000234951.2	ENSMUSG00000024135.11	Srbd1	chr17	protein_coding	S1 RNA binding domain 1
chr17	86311381	86347720	-	86295937	86347720	A3SS	0.33	50	50	ENSMUST00000234951.2	ENSMUSG00000024135.11	Srbd1	chr17	protein_coding	S1 RNA binding domain 1
chr17	86476368	86483652	+	86476368	86660983	A3SS	0.5	50	50	ENSMUST00000097275.9	ENSMUSG00000045038.15	Prkce	chr17	protein_coding	protein kinase C, epsilon
chr17	87252497	87255272	-	87252497;87253355	87253068;87255272	ES	0.5	50	50	ENSMUST00000233995.2	ENSMUSG00000053375.9	Atp6v1e2	chr17	protein_coding	ATPase, H+ transporting, lysosomal V1 subunit E2
chr17	87302151	87304333	+	87302151;87302527	87302432;87304333	ES	0.5	50	50	ENSMUST00000024956.15	ENSMUSG00000024143.16	Rhoq	chr17	protein_coding	ras homolog family member Q
chr17	87302151	87304333	+	87302151	87302432	3pMXE	0.5	50	50	ENSMUST00000139344.2	ENSMUSG00000024143.16	Rhoq	chr17	protein_coding	ras homolog family member Q
chr17	87333103	87335077	+	87333103	87335127	A3SS	0.5	50	50	ENSMUST00000024959.10	ENSMUSG00000024146.10	Cript	chr17	protein_coding	cysteine-rich PDZ-binding protein
chr17	87333081	87335127	+	87333103	87335127	A5SS	0.5	50	50	ENSMUST00000024959.10	ENSMUSG00000024146.10	Cript	chr17	protein_coding	cysteine-rich PDZ-binding protein
chr17	87415475	87441050	+	87415475;87428236	87428176;87441050	ES	0.5	50	50	ENSMUST00000041369.8	ENSMUSG00000037104.10	Socs5	chr17	protein_coding	suppressor of cytokine signaling 5
chr17	87428236	87428490	+	87428236	87441050	A3SS	0.5	50	50	ENSMUST00000041369.8	ENSMUSG00000037104.10	Socs5	chr17	protein_coding	suppressor of cytokine signaling 5
chr17	87565517;87566309	87566178;87573263	-	87565517	87573263	cassetteExon	0.5	100	100	ENSMUST00000024963.11	ENSMUSG00000024150.13	Mcfd2	chr17	protein_coding	multiple coagulation factor deficiency 2
chr17	87565517;87571793	87571569;87573263	-	87565517	87573263	cassetteExon	0.5	100	100	ENSMUST00000024963.11	ENSMUSG00000024150.13	Mcfd2	chr17	protein_coding	multiple coagulation factor deficiency 2
chr17	87565517	87573220	-	87565517	87573263	A5SS	0.25	50	50	ENSMUST00000024963.11	ENSMUSG00000024150.13	Mcfd2	chr17	protein_coding	multiple coagulation factor deficiency 2
chr17	87565517;87566309	87566178;87571569	-	87565517	87571569	cassetteExon	0.5	100	100	ENSMUST00000144236.9	ENSMUSG00000024150.13	Mcfd2	chr17	protein_coding	multiple coagulation factor deficiency 2
chr17	87565517;87566309	87566178;87573263	-	87565517;87571793	87571569;87573263	MXE	0.5	100	100	ENSMUST00000144236.9	ENSMUSG00000024150.13	Mcfd2	chr17	protein_coding	multiple coagulation factor deficiency 2
chr17	87565517	87573220	-	87565517	87571569	A5SS&ES	0.25	50	50	ENSMUST00000144236.9	ENSMUSG00000024150.13	Mcfd2	chr17	protein_coding	multiple coagulation factor deficiency 2
chr17	87565517	87573220	-	87565517;87566309	87566178;87573220	ES	0.5	50	50	ENSMUST00000129616.8	ENSMUSG00000024150.13	Mcfd2	chr17	protein_coding	multiple coagulation factor deficiency 2
chr17	87565517	87571569	-	87565517	87566178	A5SS&ES	0.25	50	50	ENSMUST00000129616.8	ENSMUSG00000024150.13	Mcfd2	chr17	protein_coding	multiple coagulation factor deficiency 2
chr17	87565517	87573263	-	87565517	87566178	A5SS&ES	0.25	50	50	ENSMUST00000129616.8	ENSMUSG00000024150.13	Mcfd2	chr17	protein_coding	multiple coagulation factor deficiency 2
chr17	87566309	87571569	-	87566309	87573220	A5SS	0.33	50	50	ENSMUST00000129616.8	ENSMUSG00000024150.13	Mcfd2	chr17	protein_coding	multiple coagulation factor deficiency 2
chr17	87566309	87573263	-	87566309	87573220	A5SS	0.33	50	50	ENSMUST00000129616.8	ENSMUSG00000024150.13	Mcfd2	chr17	protein_coding	multiple coagulation factor deficiency 2
chr17	87566309;87571793	87571569;87573263	-	87566309	87573263	cassetteExon	0.5	100	100	ENSMUST00000151155.8	ENSMUSG00000024150.13	Mcfd2	chr17	protein_coding	multiple coagulation factor deficiency 2
chr17	87565517	87573220	-	87565517	87566178	A5SS&ES	0.25	50	50	ENSMUST00000151155.8	ENSMUSG00000024150.13	Mcfd2	chr17	protein_coding	multiple coagulation factor deficiency 2
chr17	87565517	87571569	-	87566309	87571569	3pMXE	0.5	50	50	ENSMUST00000139258.2	ENSMUSG00000024150.13	Mcfd2	chr17	protein_coding	multiple coagulation factor deficiency 2
chr17	87585010	87589602	-	87585010	87587987	5pMXE	0.5	50	50	ENSMUST00000137539.8	ENSMUSG00000085287.9	4833418N02Rik	chr17	lncRNA	RIKEN cDNA 4833418N02 gene
chr17	87585010	87589602	-	87585010;87588190	87587987;87589602	ES	0.33	50	50	ENSMUST00000146560.9	ENSMUSG00000085287.9	4833418N02Rik	chr17	lncRNA	RIKEN cDNA 4833418N02 gene
chr17	87588449	87589602	-	87588190	87589602	A3SS	0.33	50	50	ENSMUST00000146560.9	ENSMUSG00000085287.9	4833418N02Rik	chr17	lncRNA	RIKEN cDNA 4833418N02 gene
chr17	87585010;87588449	87587987;87589602	-	87585010	87589602	cassetteExon	0.5	100	100	ENSMUST00000160917.2	ENSMUSG00000085287.9	4833418N02Rik	chr17	lncRNA	RIKEN cDNA 4833418N02 gene
chr17	87585010	87589602	-	87588449	87589602	3pMXE	0.33	50	50	ENSMUST00000161759.2	ENSMUSG00000085287.9	4833418N02Rik	chr17	lncRNA	RIKEN cDNA 4833418N02 gene
chr17	87590838	87600239	+	87590838;87597780	87597617;87600239	ES	0.5	50	50	ENSMUST00000041110.12	ENSMUSG00000036918.17	Ttc7	chr17	protein_coding	tetratricopeptide repeat domain 7
chr17	87654129	87669277	+	87654129;87666658	87666542;87669277	ES	0.5	50	50	ENSMUST00000041110.12	ENSMUSG00000036918.17	Ttc7	chr17	protein_coding	tetratricopeptide repeat domain 7
chr17	87600407;87601494	87601437;87614357	+	87600407	87614357	cassetteExon	0.5	100	100	ENSMUST00000041110.12	ENSMUSG00000036918.17	Ttc7	chr17	protein_coding	tetratricopeptide repeat domain 7
chr17	87616937	87628831	+	87616272	87628831	A5SS	0.5	50	50	ENSMUST00000041110.12	ENSMUSG00000036918.17	Ttc7	chr17	protein_coding	tetratricopeptide repeat domain 7
chr17	87637696	87641695	+	87637536	87641695	A5SS	0.5	50	50	ENSMUST00000041110.12	ENSMUSG00000036918.17	Ttc7	chr17	protein_coding	tetratricopeptide repeat domain 7
chr17	87671022	87677887	+	87671018	87677887	A5SS	0.5	50	50	ENSMUST00000041110.12	ENSMUSG00000036918.17	Ttc7	chr17	protein_coding	tetratricopeptide repeat domain 7
chr17	87686387	87687277	+	87678089	87687277	A5SS	0.5	50	50	ENSMUST00000041110.12	ENSMUSG00000036918.17	Ttc7	chr17	protein_coding	tetratricopeptide repeat domain 7
chr17	87725254	87729942	-	87719020	87729942	A3SS	0.33	50	50	ENSMUST00000040609.9	ENSMUSG00000036557.9	Stpg4	chr17	protein_coding	sperm tail PG rich repeat containing 4
chr17	87730105	87733071	-	87730199	87733071	A3SS	0.5	50	50	ENSMUST00000040609.9	ENSMUSG00000036557.9	Stpg4	chr17	protein_coding	sperm tail PG rich repeat containing 4
chr17	87702693;87719020	87718657;87729942	-	87702693	87729942	cassetteExon	0.5	100	100	ENSMUST00000187078.7	ENSMUSG00000036557.9	Stpg4	chr17	protein_coding	sperm tail PG rich repeat containing 4
chr17	87725254	87729942	-	87702693	87729942	A3SS	0.33	50	50	ENSMUST00000187078.7	ENSMUSG00000036557.9	Stpg4	chr17	protein_coding	sperm tail PG rich repeat containing 4
chr17	87743362	87754221	-	87743362;87750154	87750124;87754221	ES	0.5	50	50	ENSMUST00000040440.7	ENSMUSG00000036438.15	Calm2	chr17	protein_coding	calmodulin 2
chr17	87764498	87766601	-	87764498	87767287	A5SS	0.5	50	50	ENSMUST00000234806.2	ENSMUSG00000117545.2	Gm30794	chr17	lncRNA	predicted gene, 30794
chr17	87943632	87943886	+	87943500	87943886	A5SS	0.5	50	50	ENSMUST00000235125.2	ENSMUSG00000045394.10	Epcam	chr17	protein_coding	epithelial cell adhesion molecule
chr17	87944032	87947324	+	87944322	87947324	A5SS	0.5	50	50	ENSMUST00000235125.2	ENSMUSG00000045394.10	Epcam	chr17	protein_coding	epithelial cell adhesion molecule
chr17	87985790	87989959	+	87985790;87987506	87987228;87989959	ES	0.5	50	50	ENSMUST00000024967.14	ENSMUSG00000024151.14	Msh2	chr17	protein_coding	mutS homolog 2
chr17	88014733	88020057	+	88014733;88016030	88015880;88020057	ES	0.5	50	50	ENSMUST00000024967.14	ENSMUSG00000024151.14	Msh2	chr17	protein_coding	mutS homolog 2
chr17	88014733	88020057	+	88014733	88015880	3pMXE	0.5	50	50	ENSMUST00000173097.8	ENSMUSG00000024151.14	Msh2	chr17	protein_coding	mutS homolog 2
chr17	88134590	88146064	+	88134590;88141559	88141414;88146064	ES	0.5	50	50	ENSMUST00000234934.2	ENSMUSG00000117466.2	Gm50039	chr17	lncRNA	predicted gene, 50039
chr17	88282667	88291874	+	88291042	88291874	A5SS&ES	0.5	50	50	ENSMUST00000005503.5	ENSMUSG00000005370.5	Msh6	chr17	protein_coding	mutS homolog 6
chr17	88287225	88287619	+	88282833	88287619	A5SS	0.5	50	50	ENSMUST00000005503.5	ENSMUSG00000005370.5	Msh6	chr17	protein_coding	mutS homolog 6
chr17	88305063	88308200	-	88305063;88307055	88306961;88308200	ES	0.5	50	50	ENSMUST00000130379.9	ENSMUSG00000005371.16	Fbxo11	chr17	protein_coding	F-box protein 11
chr17	88323140	88372646	-	88323140	88372437	5pMXE	0.33	50	50	ENSMUST00000130379.9	ENSMUSG00000005371.16	Fbxo11	chr17	protein_coding	F-box protein 11
chr17	88321978	88322827	-	88321975	88322827	A3SS	0.5	50	50	ENSMUST00000130379.9	ENSMUSG00000005371.16	Fbxo11	chr17	protein_coding	F-box protein 11
chr17	88323140	88372063	-	88323140	88372437	A5SS	0.33	50	50	ENSMUST00000130379.9	ENSMUSG00000005371.16	Fbxo11	chr17	protein_coding	F-box protein 11
chr17	88323140	88372063	-	88323140	88372646	A5SS	0.33	50	50	ENSMUST00000235112.2	ENSMUSG00000005371.16	Fbxo11	chr17	protein_coding	F-box protein 11
chr17	88603709	88607976	-	88603706	88607976	A3SS	0.5	50	50	ENSMUST00000234143.2	ENSMUSG00000117497.2	1700116H05Rik	chr17	lncRNA	RIKEN cDNA 1700116H05 gene
chr17	88608095;88612136	88611841;88612622	-	88608095	88612622	cassetteExon	0.5	100	100	ENSMUST00000234211.2	ENSMUSG00000117497.2	1700116H05Rik	chr17	lncRNA	RIKEN cDNA 1700116H05 gene
chr17	88603706	88612622	-	88608095	88612622	A3SS&ES	0.33	50	50	ENSMUST00000234211.2	ENSMUSG00000117497.2	1700116H05Rik	chr17	lncRNA	RIKEN cDNA 1700116H05 gene
chr17	88603706;88608095	88607976;88612622	-	88603706	88612622	cassetteExon	0.5	100	100	ENSMUST00000234925.2	ENSMUSG00000117497.2	1700116H05Rik	chr17	lncRNA	RIKEN cDNA 1700116H05 gene
chr17	88612136	88612622	-	88603706	88612622	A3SS	0.33	50	50	ENSMUST00000234925.2	ENSMUSG00000117497.2	1700116H05Rik	chr17	lncRNA	RIKEN cDNA 1700116H05 gene
chr17	88748312;88767096	88767029;88770141	+	88748312	88770141	cassetteExon	0.5	100	100	ENSMUST00000112238.9	ENSMUSG00000034998.19	Foxn2	chr17	protein_coding	forkhead box N2
chr17	88770691;88781180	88781096;88783284	+	88770691	88783284	cassetteExon	0.5	100	100	ENSMUST00000112238.9	ENSMUSG00000034998.19	Foxn2	chr17	protein_coding	forkhead box N2
chr17	88905169	88951766	+	88905169	88942549	3pMXE	0.5	50	50	ENSMUST00000137138.2	ENSMUSG00000033855.16	Ston1	chr17	protein_coding	stonin 1
chr17	88934290	88942549	+	88905169	88942549	A5SS	0.33	50	50	ENSMUST00000137138.2	ENSMUSG00000033855.16	Ston1	chr17	protein_coding	stonin 1
chr17	88934953	88942549	+	88905169	88942549	A5SS	0.33	50	50	ENSMUST00000137138.2	ENSMUSG00000033855.16	Ston1	chr17	protein_coding	stonin 1
chr17	88944510	88951766	+	88905169	88951766	A5SS	0.5	50	50	ENSMUST00000153613.2	ENSMUSG00000033855.16	Ston1	chr17	protein_coding	stonin 1
chr17	88934953	88942549	+	88934290	88942549	A5SS	0.33	50	50	ENSMUST00000163588.8	ENSMUSG00000033855.16	Ston1	chr17	protein_coding	stonin 1
chr17	88953072	88969633	+	88953072	88955741	3pMXE	0.5	50	50	ENSMUST00000064035.13	ENSMUSG00000033855.16	Ston1	chr17	protein_coding	stonin 1
chr17	88970993	88971893	-	88970993	88972027	A5SS	0.5	50	50	ENSMUST00000234252.2	ENSMUSG00000117567.2	Gm50056	chr17	lncRNA	predicted gene, 50056
chr17	89002096	89004559	+	89002096	89018869	A3SS	0.5	50	50	ENSMUST00000024970.11	ENSMUSG00000024154.12	Gtf2a1l	chr17	protein_coding	general transcription factor IIA, 1-like
chr17	88979047	88997415	+	88979047	89001531	A3SS	0.5	50	50	ENSMUST00000161481.2	ENSMUSG00000024154.12	Gtf2a1l	chr17	protein_coding	general transcription factor IIA, 1-like
chr17	88999230	89001531	+	88979047	89001531	A5SS	0.5	50	50	ENSMUST00000161481.2	ENSMUSG00000024154.12	Gtf2a1l	chr17	protein_coding	general transcription factor IIA, 1-like
chr17	89079511	89099227	-	89079511	89081301	5pMXE	0.5	50	50	ENSMUST00000234881.2	ENSMUSG00000024107.8	Lhcgr	chr17	protein_coding	luteinizing hormone/choriogonadotropin receptor
chr17	89050137	89057531	-	89024422	89057531	A3SS	0.33	50	50	ENSMUST00000234881.2	ENSMUSG00000024107.8	Lhcgr	chr17	protein_coding	luteinizing hormone/choriogonadotropin receptor
chr17	89050565	89057531	-	89024422	89057531	A3SS	0.33	50	50	ENSMUST00000234881.2	ENSMUSG00000024107.8	Lhcgr	chr17	protein_coding	luteinizing hormone/choriogonadotropin receptor
chr17	89063053	89065771	-	89057611	89065771	A3SS	0.5	50	50	ENSMUST00000234881.2	ENSMUSG00000024107.8	Lhcgr	chr17	protein_coding	luteinizing hormone/choriogonadotropin receptor
chr17	89077339	89079440	-	89072650	89079440	A3SS	0.5	50	50	ENSMUST00000234881.2	ENSMUSG00000024107.8	Lhcgr	chr17	protein_coding	luteinizing hormone/choriogonadotropin receptor
chr17	89057611	89061172	-	89057611	89065771	A5SS	0.5	50	50	ENSMUST00000234881.2	ENSMUSG00000024107.8	Lhcgr	chr17	protein_coding	luteinizing hormone/choriogonadotropin receptor
chr17	89072650	89074681	-	89072650	89079440	A5SS	0.5	50	50	ENSMUST00000234881.2	ENSMUSG00000024107.8	Lhcgr	chr17	protein_coding	luteinizing hormone/choriogonadotropin receptor
chr17	89050137	89057531	-	89050565	89057531	A3SS	0.33	50	50	ENSMUST00000024916.7	ENSMUSG00000024107.8	Lhcgr	chr17	protein_coding	luteinizing hormone/choriogonadotropin receptor
chr17	89061332	89062979	-	89061357	89062979	A3SS	0.5	50	50	ENSMUST00000024916.7	ENSMUSG00000024107.8	Lhcgr	chr17	protein_coding	luteinizing hormone/choriogonadotropin receptor
chr17	90469861	90515751	-	90469861;90471309	90471220;90515751	ES	0.5	50	50	ENSMUST00000072671.14	ENSMUSG00000024109.19	Nrxn1	chr17	protein_coding	neurexin I
chr17	90905057	90930848	-	90905057;90928319	90928293;90930848	ES	0.5	50	50	ENSMUST00000072671.14	ENSMUSG00000024109.19	Nrxn1	chr17	protein_coding	neurexin I
chr17	91011795	91299543	-	91011795;91298806	91298795;91299543	ES	0.5	50	50	ENSMUST00000072671.14	ENSMUSG00000024109.19	Nrxn1	chr17	protein_coding	neurexin I
chr17	90868288;90869256	90869230;90872733	-	90868288	90872733	cassetteExon	0.5	100	100	ENSMUST00000072671.14	ENSMUSG00000024109.19	Nrxn1	chr17	protein_coding	neurexin I
chr17	91008333;91009439	91009395;91011494	-	91008333	91011494	cassetteExon	0.5	100	100	ENSMUST00000072671.14	ENSMUSG00000024109.19	Nrxn1	chr17	protein_coding	neurexin I
chr17	91008333;91009439	91009416;91011494	-	91008333	91011494	cassetteExon	0.5	100	100	ENSMUST00000072671.14	ENSMUSG00000024109.19	Nrxn1	chr17	protein_coding	neurexin I
chr17	90842902	90868169	-	90670369	90868169	A3SS	0.5	50	50	ENSMUST00000072671.14	ENSMUSG00000024109.19	Nrxn1	chr17	protein_coding	neurexin I
chr17	90344812	90366904	-	90344812	90366913	A5SS	0.5	50	50	ENSMUST00000072671.14	ENSMUSG00000024109.19	Nrxn1	chr17	protein_coding	neurexin I
chr17	90366991	90394500	-	90366991	90469542	A5SS	0.33	50	50	ENSMUST00000072671.14	ENSMUSG00000024109.19	Nrxn1	chr17	protein_coding	neurexin I
chr17	90366991	90395593	-	90366991	90469542	A5SS	0.33	50	50	ENSMUST00000072671.14	ENSMUSG00000024109.19	Nrxn1	chr17	protein_coding	neurexin I
chr17	90515922	90656763	-	90515922	90670188	A5SS	0.5	50	50	ENSMUST00000072671.14	ENSMUSG00000024109.19	Nrxn1	chr17	protein_coding	neurexin I
chr17	90670369	90762234	-	90670369	90868169	A5SS	0.5	50	50	ENSMUST00000072671.14	ENSMUSG00000024109.19	Nrxn1	chr17	protein_coding	neurexin I
chr17	91008333	91009395	-	91008333	91009416	A5SS	0.33	50	50	ENSMUST00000160844.10	ENSMUSG00000024109.19	Nrxn1	chr17	protein_coding	neurexin I
chr17	91397033	91400031	-	91397033	91400027	A5SS	0.5	50	50	ENSMUST00000160844.10	ENSMUSG00000024109.19	Nrxn1	chr17	protein_coding	neurexin I
chr17	90366991	90394500	-	90366991	90395593	A5SS	0.33	50	50	ENSMUST00000197268.5	ENSMUSG00000024109.19	Nrxn1	chr17	protein_coding	neurexin I
chr17	91302906	91395383	-	91011795	91395383	A3SS	0.5	50	50	ENSMUST00000161637.8	ENSMUSG00000024109.19	Nrxn1	chr17	protein_coding	neurexin I
chr17	91011795	91298795	-	91011795	91395383	A5SS	0.33	50	50	ENSMUST00000161637.8	ENSMUSG00000024109.19	Nrxn1	chr17	protein_coding	neurexin I
chr17	91011795	91299543	-	91011795	91395383	A5SS	0.33	50	50	ENSMUST00000161637.8	ENSMUSG00000024109.19	Nrxn1	chr17	protein_coding	neurexin I
chr17	90937696	90950419	-	90897657	90950419	A3SS	0.5	50	50	ENSMUST00000197224.2	ENSMUSG00000024109.19	Nrxn1	chr17	protein_coding	neurexin I
chr17	90897657	90904935	-	90897657	90950419	A5SS	0.5	50	50	ENSMUST00000197224.2	ENSMUSG00000024109.19	Nrxn1	chr17	protein_coding	neurexin I
chr17	91873792	91934888	+	91873792;91926241	91926118;91934888	ES	0.5	50	50	ENSMUST00000234668.2	ENSMUSG00000117417.2	Gm49991	chr17	lncRNA	predicted gene, 49991
chr17	92119610	92155290	-	92119610	92155824	A5SS	0.5	50	50	ENSMUST00000234442.2	ENSMUSG00000117433.2	Gm41654	chr17	lncRNA	predicted gene, 41654
chr17	92166082	92169351	-	92166082	92169434	A5SS	0.5	50	50	ENSMUST00000234442.2	ENSMUSG00000117433.2	Gm41654	chr17	lncRNA	predicted gene, 41654
chr17	92169499	92179255	-	92169499	92178506	A5SS&ES	0.5	50	50	ENSMUST00000234442.2	ENSMUSG00000117433.2	Gm41654	chr17	lncRNA	predicted gene, 41654
chr17	93506626	93507441	+	93506626;93507050	93506990;93507441	ES	0.5	50	50	ENSMUST00000234646.2	ENSMUSG00000024256.8	Adcyap1	chr17	protein_coding	adenylate cyclase activating polypeptide 1
chr17	93506626	93507441	+	93507050	93507441	A5SS	0.5	50	50	ENSMUST00000064775.8	ENSMUSG00000024256.8	Adcyap1	chr17	protein_coding	adenylate cyclase activating polypeptide 1
chr17	95048183	95055045	-	95048183;95051422	95051360;95055045	ES	0.5	50	50	ENSMUST00000234990.2	ENSMUSG00000055660.10	Mettl4	chr17	protein_coding	methyltransferase like 4
chr17	95055845	95056814	-	95055845	95057165	A5SS	0.33	50	50	ENSMUST00000234990.2	ENSMUSG00000055660.10	Mettl4	chr17	protein_coding	methyltransferase like 4
chr17	95055845	95056865	-	95055845	95057165	A5SS	0.33	50	50	ENSMUST00000234990.2	ENSMUSG00000055660.10	Mettl4	chr17	protein_coding	methyltransferase like 4
chr17	95055845	95056865	-	95055845	95056814	A5SS	0.33	50	50	ENSMUST00000171284.3	ENSMUSG00000055660.10	Mettl4	chr17	protein_coding	methyltransferase like 4
chr17	95063951;95067122	95067023;95068926	+	95063951	95068926	cassetteExon	0.5	100	100	ENSMUST00000182402.8	ENSMUSG00000098090.9	2700099C18Rik	chr17	transcribed_unprocessed_pseudogene	RIKEN cDNA 2700099C18 gene
chr17	95069032	95069929	+	95069032	95069890	A3SS	0.5	50	50	ENSMUST00000182402.8	ENSMUSG00000098090.9	2700099C18Rik	chr17	transcribed_unprocessed_pseudogene	RIKEN cDNA 2700099C18 gene
chr17	95074375	95078541	+	95074375	95078562	A3SS	0.5	50	50	ENSMUST00000182402.8	ENSMUSG00000098090.9	2700099C18Rik	chr17	transcribed_unprocessed_pseudogene	RIKEN cDNA 2700099C18 gene
chr17	95060303	95062639	+	95057660	95062639	A5SS	0.5	50	50	ENSMUST00000182402.8	ENSMUSG00000098090.9	2700099C18Rik	chr17	transcribed_unprocessed_pseudogene	RIKEN cDNA 2700099C18 gene
chr17	95069994	95071200	+	95070048	95071200	A5SS	0.5	50	50	ENSMUST00000182402.8	ENSMUSG00000098090.9	2700099C18Rik	chr17	transcribed_unprocessed_pseudogene	RIKEN cDNA 2700099C18 gene
chr17	95057660	95062639	+	95057660	95069890	A3SS	0.5	50	50	ENSMUST00000182475.8	ENSMUSG00000098090.9	2700099C18Rik	chr17	transcribed_unprocessed_pseudogene	RIKEN cDNA 2700099C18 gene
chr17	95069032	95069890	+	95057660	95069890	A5SS	0.5	50	50	ENSMUST00000182475.8	ENSMUSG00000098090.9	2700099C18Rik	chr17	transcribed_unprocessed_pseudogene	RIKEN cDNA 2700099C18 gene
chr17	95069005	95126323	-	95069005;95071967	95071911;95126323	ES	0.5	50	50	ENSMUST00000234189.2	ENSMUSG00000066057.8	Gm1976	chr17	lncRNA	predicted gene 1976
chr17	95069005	95126323	-	95069005	95071911	5pMXE	0.5	50	50	ENSMUST00000084298.6	ENSMUSG00000066057.8	Gm1976	chr17	lncRNA	predicted gene 1976
chr18	3273578	3295040	-	3273578;3288092	3287904;3295040	ES	0.33	50	50	ENSMUST00000151311.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3325478	3337380	-	3325478	3327494	5pMXE	0.5	50	50	ENSMUST00000151311.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3273578;3276729	3276694;3287904	-	3273578	3287904	cassetteExon	0.5	100	100	ENSMUST00000151311.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3273578;3276729	3276694;3295040	-	3273578;3288092	3287904;3295040	MXE	0.5	100	100	ENSMUST00000151311.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3273578;3276729	3276694;3325361	-	3273578;3295416	3287904;3325361	MXE	0.5	100	100	ENSMUST00000151311.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3288092;3299308	3299162;3325361	-	3288092;3295416	3295040;3325361	MXE	0.5	100	100	ENSMUST00000151311.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3295416;3299308	3299162;3325361	-	3295416	3325361	cassetteExon	0.5	100	100	ENSMUST00000151311.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3295416;3309987	3309646;3325361	-	3295416	3325361	cassetteExon	0.5	100	100	ENSMUST00000151311.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3268129	3273422	-	3267732	3273422	A3SS	0.5	50	50	ENSMUST00000151311.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3284073	3287904	-	3273578	3287904	A3SS	0.33	50	50	ENSMUST00000151311.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3318989	3325361	-	3295416	3325361	A3SS	0.2	50	50	ENSMUST00000151311.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3273578	3280949	-	3273578	3287904	A5SS	0.2	50	50	ENSMUST00000151311.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3273578	3281688	-	3273578	3287904	A5SS	0.2	50	50	ENSMUST00000151311.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3295416	3299450	-	3295416	3325361	A5SS	0.25	50	50	ENSMUST00000151311.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3276729	3295040	-	3276729;3288092	3287904;3295040	ES	0.33	50	50	ENSMUST00000150235.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3325478	3337380	-	3325478;3327591	3327494;3337380	ES	0.33	50	50	ENSMUST00000150235.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3295416;3309987	3309646;3325361	-	3295416;3299308	3299162;3325361	MXE	0.5	100	100	ENSMUST00000150235.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3299308;3309987	3309646;3325361	-	3299308	3325361	cassetteExon	0.5	100	100	ENSMUST00000150235.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3284073	3287904	-	3276729	3287904	A3SS	0.33	50	50	ENSMUST00000150235.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3318989	3325361	-	3299308	3325361	A3SS	0.2	50	50	ENSMUST00000150235.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3273578	3280949	-	3273578	3276694	A5SS&ES	0.16	50	50	ENSMUST00000150235.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3273578	3281688	-	3273578	3276694	A5SS&ES	0.16	50	50	ENSMUST00000150235.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3276729	3280949	-	3276729	3287904	A5SS	0.2	50	50	ENSMUST00000150235.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3276729	3281688	-	3276729	3287904	A5SS	0.2	50	50	ENSMUST00000150235.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3295416	3299450	-	3295416	3299162	A5SS&ES	0.25	50	50	ENSMUST00000150235.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3299308	3299450	-	3299308	3325361	A5SS	0.33	50	50	ENSMUST00000150235.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3327591	3336961	-	3327591	3337380	A5SS	0.5	50	50	ENSMUST00000150235.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3295416	3299450	-	3295416;3299308	3299162;3299450	ES	0.5	50	50	ENSMUST00000122958.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3299308	3309646	-	3299308	3299450	5pMXE	0.33	50	50	ENSMUST00000122958.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3273578	3295040	-	3273578;3276729	3276694;3295040	ES	0.33	50	50	ENSMUST00000154135.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3276729	3280949	-	3276729	3295040	A5SS	0.2	50	50	ENSMUST00000154135.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3276729	3281688	-	3276729	3295040	A5SS	0.2	50	50	ENSMUST00000154135.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3273578;3276729	3276694;3325361	-	3273578;3299308	3287904;3325361	MXE	0.5	100	100	ENSMUST00000025069.11	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3273578;3288092	3287904;3299162	-	3273578;3295416	3276694;3299162	MXE	0.5	100	100	ENSMUST00000165086.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3276729;3288092	3287904;3299162	-	3276729;3295416	3295040;3299162	MXE	0.5	100	100	ENSMUST00000165086.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3273578	3295040	-	3273578	3281688	5pMXE	0.16	50	50	ENSMUST00000140332.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3273578	3337380	-	3273578	3281688	5pMXE	0.16	50	50	ENSMUST00000140332.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3273578;3276729	3276694;3281688	-	3273578	3281688	cassetteExon	0.5	100	100	ENSMUST00000140332.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3273578	3280949	-	3273578	3281688	A5SS	0.16	50	50	ENSMUST00000140332.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3325478	3337380	-	3273578	3337380	A3SS	0.33	50	50	ENSMUST00000140912.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3327591	3337380	-	3273578	3337380	A3SS	0.33	50	50	ENSMUST00000140912.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3273578	3276694	-	3273578	3337380	A5SS	0.16	50	50	ENSMUST00000140912.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3273578	3280949	-	3273578	3337380	A5SS	0.16	50	50	ENSMUST00000140912.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3273578	3287904	-	3273578	3337380	A5SS	0.16	50	50	ENSMUST00000140912.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3273578	3295040	-	3273578	3337380	A5SS	0.16	50	50	ENSMUST00000140912.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3273578;3276729	3276694;3325361	-	3273578;3299308	3295040;3325361	MXE	0.5	100	100	ENSMUST00000154470.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3273578;3288092	3287904;3299162	-	3273578;3295416	3295040;3299162	MXE	0.5	100	100	ENSMUST00000154470.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3273578	3280949	-	3273578	3295040	A5SS	0.16	50	50	ENSMUST00000154470.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3295416	3309646	-	3295416	3299450	5pMXE	0.25	50	50	ENSMUST00000129435.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3288092;3299308	3299162;3299450	-	3288092;3295416	3295040;3299450	MXE	0.5	100	100	ENSMUST00000129435.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3273578	3280949	-	3273578;3276729	3276694;3280949	ES	0.33	50	50	ENSMUST00000124747.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3276729	3281688	-	3276729	3280949	5pMXE	0.2	50	50	ENSMUST00000124747.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3276729	3325361	-	3276729	3280949	5pMXE	0.2	50	50	ENSMUST00000124747.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3276775	3280949	-	3276729	3280949	A3SS	0.33	50	50	ENSMUST00000124747.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3273578	3280949	-	3273578;3276775	3276694;3280949	ES	0.33	50	50	ENSMUST00000049942.13	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3276729	3325361	-	3276729	3281688	5pMXE	0.2	50	50	ENSMUST00000147138.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3273578;3276729	3276694;3325361	-	3273578;3295416	3295040;3325361	MXE	0.5	100	100	ENSMUST00000137568.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3273578;3276729	3276694;3325361	-	3273578;3309987	3295040;3325361	MXE	0.5	100	100	ENSMUST00000134027.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3295416;3299308	3299162;3309646	-	3295416	3309646	cassetteExon	0.5	100	100	ENSMUST00000134027.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3318989	3325361	-	3309987	3325361	A3SS	0.2	50	50	ENSMUST00000134027.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3295416	3325361	-	3295416	3309646	5pMXE	0.25	50	50	ENSMUST00000152108.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3288092;3299308	3299162;3309646	-	3288092;3295416	3295040;3309646	MXE	0.5	100	100	ENSMUST00000136961.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3276729;3295416	3295040;3325361	-	3276729	3325361	cassetteExon	0.5	100	100	ENSMUST00000148305.2	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3299308	3325361	-	3276729	3325361	A3SS	0.2	50	50	ENSMUST00000148305.2	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3309987	3325361	-	3276729	3325361	A3SS	0.2	50	50	ENSMUST00000148305.2	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3318989	3325361	-	3276729	3325361	A3SS	0.2	50	50	ENSMUST00000148305.2	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3273578	3287904	-	3273578	3276694	A5SS&ES	0.2	50	50	ENSMUST00000148305.2	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3276729	3287904	-	3276729	3325361	A5SS	0.2	50	50	ENSMUST00000148305.2	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3299308	3325361	-	3299308	3309646	5pMXE	0.33	50	50	ENSMUST00000154715.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3273578	3295040	-	3288092	3295040	3pMXE	0.33	50	50	ENSMUST00000130047.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3276729	3295040	-	3288092	3295040	3pMXE	0.33	50	50	ENSMUST00000130047.8	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3288092;3295416	3295040;3299162	-	3288092	3299162	cassetteExon	0.5	100	100	ENSMUST00000156929.2	ENSMUSG00000063889.17	Crem	chr18	protein_coding	cAMP responsive element modulator
chr18	3414224;3416553	3416468;3417535	+	3414224	3417535	cassetteExon	0.5	100	100	ENSMUST00000025073.12	ENSMUSG00000024231.16	Cul2	chr18	protein_coding	cullin 2
chr18	3431585;3434110	3433994;3434844	+	3431585	3434844	cassetteExon	0.5	100	100	ENSMUST00000025073.12	ENSMUSG00000024231.16	Cul2	chr18	protein_coding	cullin 2
chr18	3399986	3405687	+	3399986	3405685	A3SS	0.5	50	50	ENSMUST00000025073.12	ENSMUSG00000024231.16	Cul2	chr18	protein_coding	cullin 2
chr18	3405787	3414132	+	3405787	3414130	A3SS	0.33	50	50	ENSMUST00000025073.12	ENSMUSG00000024231.16	Cul2	chr18	protein_coding	cullin 2
chr18	3405787	3414174	+	3405787	3414130	A3SS	0.33	50	50	ENSMUST00000025073.12	ENSMUSG00000024231.16	Cul2	chr18	protein_coding	cullin 2
chr18	3383397	3399846	+	3383172	3399846	A5SS	0.5	50	50	ENSMUST00000025073.12	ENSMUSG00000024231.16	Cul2	chr18	protein_coding	cullin 2
chr18	3405787	3414132	+	3405787	3414174	A3SS	0.33	50	50	ENSMUST00000080089.11	ENSMUSG00000024231.16	Cul2	chr18	protein_coding	cullin 2
chr18	3414224	3416468	+	3414224	3419347	A3SS	0.33	50	50	ENSMUST00000161317.2	ENSMUSG00000024231.16	Cul2	chr18	protein_coding	cullin 2
chr18	3414224	3417535	+	3414224	3419347	A3SS	0.33	50	50	ENSMUST00000161317.2	ENSMUSG00000024231.16	Cul2	chr18	protein_coding	cullin 2
chr18	3418646	3419347	+	3414224	3419347	A5SS	0.5	50	50	ENSMUST00000161317.2	ENSMUSG00000024231.16	Cul2	chr18	protein_coding	cullin 2
chr18	3431585	3434844	+	3434110	3434844	5pMXE	0.5	50	50	ENSMUST00000159443.2	ENSMUSG00000024231.16	Cul2	chr18	protein_coding	cullin 2
chr18	4165947	4169137	+	4165947;4168660	4168497;4169137	ES	0.5	50	50	ENSMUST00000025076.10	ENSMUSG00000024233.11	Lyzl1	chr18	protein_coding	lysozyme-like 1
chr18	4339603	4343022	-	4339603;4340808	4340547;4343022	ES	0.5	50	50	ENSMUST00000025078.10	ENSMUSG00000024235.12	Map3k8	chr18	protein_coding	mitogen-activated protein kinase kinase kinase 8
chr18	4334769	4336166	-	4334769	4339497	A5SS	0.5	50	50	ENSMUST00000025078.10	ENSMUSG00000024235.12	Map3k8	chr18	protein_coding	mitogen-activated protein kinase kinase kinase 8
chr18	4363091	4367859	+	4354192	4367859	A5SS	0.5	50	50	ENSMUST00000235048.2	ENSMUSG00000117401.2	4833419F23Rik	chr18	lncRNA	RIKEN cDNA 4833419F23 gene
chr18	4354192	4367859	+	4354192	4379569	A3SS	0.5	50	50	ENSMUST00000234586.2	ENSMUSG00000117594.2	Gm50096	chr18	lncRNA	predicted gene, 50096
chr18	4379741	4380654	+	4379741	4380673	A3SS	0.5	50	50	ENSMUST00000234586.2	ENSMUSG00000117594.2	Gm50096	chr18	lncRNA	predicted gene, 50096
chr18	4375778	4379569	+	4354192	4379569	A5SS	0.5	50	50	ENSMUST00000234586.2	ENSMUSG00000117594.2	Gm50096	chr18	lncRNA	predicted gene, 50096
chr18	4380887	4383189	+	4380887	4383185	A3SS	0.5	50	50	ENSMUST00000234186.2	ENSMUSG00000024234.8	Mtpap	chr18	protein_coding	mitochondrial poly(A) polymerase
chr18	5037165	5046589	+	5037165;5040239	5040148;5046589	ES	0.5	50	50	ENSMUST00000126977.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	5049494	5055980	+	5049494;5054098	5054018;5055980	ES	0.5	50	50	ENSMUST00000126977.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	5056849	5058125	+	5056849;5057439	5057275;5058125	ES	0.33	50	50	ENSMUST00000126977.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	5059369	5062162	+	5059369;5060610	5060515;5062162	ES	0.5	50	50	ENSMUST00000126977.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	4920874;4971197	4971090;5037108	+	4920874	5037108	cassetteExon	0.5	100	100	ENSMUST00000126977.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	5108708	5114508	+	5108708	5114531	A3SS	0.5	50	50	ENSMUST00000126977.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	4977878	5037108	+	4920874	5037108	A5SS	0.16	50	50	ENSMUST00000126977.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	4993987	5037108	+	4920874	5037108	A5SS	0.16	50	50	ENSMUST00000126977.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	4995149	5037108	+	4920874	5037108	A5SS	0.16	50	50	ENSMUST00000126977.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	5035226	5037108	+	4920874	5037108	A5SS	0.16	50	50	ENSMUST00000126977.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	5099697	5106664	+	5105871	5106664	A5SS&ES	0.5	50	50	ENSMUST00000126977.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	5049494	5054018	+	5049494	5058125	A3SS	0.33	50	50	ENSMUST00000131210.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	5049494	5055980	+	5049494	5058125	A3SS	0.33	50	50	ENSMUST00000131210.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	4977878	5037108	+	4971197	5037108	A5SS	0.16	50	50	ENSMUST00000131210.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	4993987	5037108	+	4971197	5037108	A5SS	0.16	50	50	ENSMUST00000131210.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	4995149	5037108	+	4971197	5037108	A5SS	0.16	50	50	ENSMUST00000131210.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	5035226	5037108	+	4971197	5037108	A5SS	0.16	50	50	ENSMUST00000131210.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	5056849	5058125	+	5049494	5058125	A5SS	0.33	50	50	ENSMUST00000131210.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	5057439	5058125	+	5049494	5058125	A5SS	0.33	50	50	ENSMUST00000131210.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	4993987	5037108	+	4977878	5037108	A5SS	0.2	50	50	ENSMUST00000143254.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	4995149	5037108	+	4977878	5037108	A5SS	0.2	50	50	ENSMUST00000143254.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	5035226	5037108	+	4977878	5037108	A5SS	0.2	50	50	ENSMUST00000143254.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	4995149	5037108	+	4993987	5037108	A5SS	0.16	50	50	ENSMUST00000153016.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	5035226	5037108	+	4993987	5037108	A5SS	0.16	50	50	ENSMUST00000153016.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	4995149	5002073	+	4995149	5037108	A3SS	0.5	50	50	ENSMUST00000140448.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	5035226	5037108	+	4995149	5037108	A5SS	0.16	50	50	ENSMUST00000140448.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	5037165	5046589	+	5040239	5046589	5pMXE	0.5	50	50	ENSMUST00000127297.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	5049494	5058125	+	5049494;5056849	5055980;5058125	ES	0.33	50	50	ENSMUST00000127297.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	5105871	5114531	+	5105871	5106664	A3SS&ES	0.5	50	50	ENSMUST00000131609.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	5105871	5114531	+	5108708	5114531	A5SS&ES	0.5	50	50	ENSMUST00000125512.8	ENSMUSG00000024236.19	Svil	chr18	protein_coding	supervillin
chr18	5288938	5334718	-	5288938	5334346	5pMXE	0.5	50	50	ENSMUST00000063989.7	ENSMUSG00000050945.9	Zfp438	chr18	protein_coding	zinc finger protein 438
chr18	5583133	5592160	-	5583133;5583796	5583713;5592160	ES	0.33	50	50	ENSMUST00000161921.8	ENSMUSG00000063087.16	Gm10125	chr18	lncRNA	predicted gene 10125
chr18	5529120	5540606	-	5525389	5540606	A3SS	0.5	50	50	ENSMUST00000161921.8	ENSMUSG00000063087.16	Gm10125	chr18	lncRNA	predicted gene 10125
chr18	5567590	5583012	-	5540678	5583012	A3SS	0.33	50	50	ENSMUST00000161921.8	ENSMUSG00000063087.16	Gm10125	chr18	lncRNA	predicted gene 10125
chr18	5575411	5583012	-	5540678	5583012	A3SS	0.33	50	50	ENSMUST00000161921.8	ENSMUSG00000063087.16	Gm10125	chr18	lncRNA	predicted gene 10125
chr18	5586387	5592160	-	5583796	5592160	A3SS	0.33	50	50	ENSMUST00000161921.8	ENSMUSG00000063087.16	Gm10125	chr18	lncRNA	predicted gene 10125
chr18	5583796	5585337	-	5583796	5592160	A5SS	0.5	50	50	ENSMUST00000161921.8	ENSMUSG00000063087.16	Gm10125	chr18	lncRNA	predicted gene 10125
chr18	5586387	5592160	-	5583133	5592160	A3SS	0.33	50	50	ENSMUST00000160925.8	ENSMUSG00000063087.16	Gm10125	chr18	lncRNA	predicted gene 10125
chr18	5575411	5583012	-	5567590	5583012	A3SS	0.33	50	50	ENSMUST00000074702.10	ENSMUSG00000063087.16	Gm10125	chr18	lncRNA	predicted gene 10125
chr18	5591967	5641382	+	5591967;5633357	5633204;5641382	ES	0.2	50	50	ENSMUST00000224200.3	ENSMUSG00000024238.16	Zeb1	chr18	protein_coding	zinc finger E-box binding homeobox 1
chr18	5593919	5641382	+	5633357	5641382	A5SS&ES	0.2	50	50	ENSMUST00000224200.3	ENSMUSG00000024238.16	Zeb1	chr18	protein_coding	zinc finger E-box binding homeobox 1
chr18	5594472	5641382	+	5633357	5641382	A5SS&ES	0.2	50	50	ENSMUST00000224200.3	ENSMUSG00000024238.16	Zeb1	chr18	protein_coding	zinc finger E-box binding homeobox 1
chr18	5604083	5641382	+	5633357	5641382	A5SS&ES	0.2	50	50	ENSMUST00000224200.3	ENSMUSG00000024238.16	Zeb1	chr18	protein_coding	zinc finger E-box binding homeobox 1
chr18	5705243	5758965	+	5705243;5748855	5748694;5758965	ES	0.5	50	50	ENSMUST00000025081.13	ENSMUSG00000024238.16	Zeb1	chr18	protein_coding	zinc finger E-box binding homeobox 1
chr18	5591967;5641518	5641382;5705043	+	5591967	5705043	cassetteExon	0.5	100	100	ENSMUST00000025081.13	ENSMUSG00000024238.16	Zeb1	chr18	protein_coding	zinc finger E-box binding homeobox 1
chr18	5591967	5633204	+	5591967	5705043	A3SS	0.33	50	50	ENSMUST00000025081.13	ENSMUSG00000024238.16	Zeb1	chr18	protein_coding	zinc finger E-box binding homeobox 1
chr18	5761433	5766392	+	5761433	5766221	A3SS	0.5	50	50	ENSMUST00000025081.13	ENSMUSG00000024238.16	Zeb1	chr18	protein_coding	zinc finger E-box binding homeobox 1
chr18	5593919	5705043	+	5591967	5705043	A5SS	0.25	50	50	ENSMUST00000025081.13	ENSMUSG00000024238.16	Zeb1	chr18	protein_coding	zinc finger E-box binding homeobox 1
chr18	5594472	5705043	+	5591967	5705043	A5SS	0.25	50	50	ENSMUST00000025081.13	ENSMUSG00000024238.16	Zeb1	chr18	protein_coding	zinc finger E-box binding homeobox 1
chr18	5731186	5748694	+	5705243	5748694	A5SS	0.33	50	50	ENSMUST00000025081.13	ENSMUSG00000024238.16	Zeb1	chr18	protein_coding	zinc finger E-box binding homeobox 1
chr18	5745700	5748694	+	5705243	5748694	A5SS	0.33	50	50	ENSMUST00000025081.13	ENSMUSG00000024238.16	Zeb1	chr18	protein_coding	zinc finger E-box binding homeobox 1
chr18	5705243	5758965	+	5748855	5758965	A5SS&ES	0.5	50	50	ENSMUST00000175925.8	ENSMUSG00000024238.16	Zeb1	chr18	protein_coding	zinc finger E-box binding homeobox 1
chr18	5731186	5748694	+	5745700	5748694	A5SS&ES	0.33	50	50	ENSMUST00000175925.8	ENSMUSG00000024238.16	Zeb1	chr18	protein_coding	zinc finger E-box binding homeobox 1
chr18	5641518	5641741	+	5641518	5705043	A3SS	0.5	50	50	ENSMUST00000161295.8	ENSMUSG00000024238.16	Zeb1	chr18	protein_coding	zinc finger E-box binding homeobox 1
chr18	5593919	5641382	+	5591967	5641382	A5SS	0.2	50	50	ENSMUST00000161295.8	ENSMUSG00000024238.16	Zeb1	chr18	protein_coding	zinc finger E-box binding homeobox 1
chr18	5593919	5705043	+	5641518	5705043	A5SS&ES	0.25	50	50	ENSMUST00000161295.8	ENSMUSG00000024238.16	Zeb1	chr18	protein_coding	zinc finger E-box binding homeobox 1
chr18	5594472	5641382	+	5591967	5641382	A5SS	0.2	50	50	ENSMUST00000161295.8	ENSMUSG00000024238.16	Zeb1	chr18	protein_coding	zinc finger E-box binding homeobox 1
chr18	5594472	5705043	+	5641518	5705043	A5SS&ES	0.25	50	50	ENSMUST00000161295.8	ENSMUSG00000024238.16	Zeb1	chr18	protein_coding	zinc finger E-box binding homeobox 1
chr18	5604083	5641382	+	5591967	5641382	A5SS	0.2	50	50	ENSMUST00000161295.8	ENSMUSG00000024238.16	Zeb1	chr18	protein_coding	zinc finger E-box binding homeobox 1
chr18	5593919	5641382	+	5593919;5594472	5594373;5641382	ES	0.25	50	50	ENSMUST00000175739.2	ENSMUSG00000024238.16	Zeb1	chr18	protein_coding	zinc finger E-box binding homeobox 1
chr18	5594472	5705043	+	5594472	5641382	3pMXE	0.5	50	50	ENSMUST00000175739.2	ENSMUSG00000024238.16	Zeb1	chr18	protein_coding	zinc finger E-box binding homeobox 1
chr18	5604083	5641382	+	5594472	5641382	A5SS	0.25	50	50	ENSMUST00000175739.2	ENSMUSG00000024238.16	Zeb1	chr18	protein_coding	zinc finger E-box binding homeobox 1
chr18	5593919;5594472	5594373;5705043	+	5593919	5705043	cassetteExon	0.5	100	100	ENSMUST00000160910.2	ENSMUSG00000024238.16	Zeb1	chr18	protein_coding	zinc finger E-box binding homeobox 1
chr18	5593919;5641518	5641382;5705043	+	5593919	5705043	cassetteExon	0.5	100	100	ENSMUST00000160910.2	ENSMUSG00000024238.16	Zeb1	chr18	protein_coding	zinc finger E-box binding homeobox 1
chr18	5593919;5594472	5594373;5705043	+	5593919;5641518	5641382;5705043	MXE	0.5	100	100	ENSMUST00000177070.8	ENSMUSG00000024238.16	Zeb1	chr18	protein_coding	zinc finger E-box binding homeobox 1
chr18	5604083	5641382	+	5593919	5641382	A5SS	0.2	50	50	ENSMUST00000177070.8	ENSMUSG00000024238.16	Zeb1	chr18	protein_coding	zinc finger E-box binding homeobox 1
chr18	5593919	5705043	+	5594472	5705043	5pMXE	0.25	50	50	ENSMUST00000162892.8	ENSMUSG00000024238.16	Zeb1	chr18	protein_coding	zinc finger E-box binding homeobox 1
chr18	5594472;5641518	5641382;5705043	+	5594472	5705043	cassetteExon	0.5	100	100	ENSMUST00000162892.8	ENSMUSG00000024238.16	Zeb1	chr18	protein_coding	zinc finger E-box binding homeobox 1
chr18	6052923	6061847	-	6052923;6057591	6057517;6061847	ES	0.5	50	50	ENSMUST00000182066.8	ENSMUSG00000041225.17	Arhgap12	chr18	protein_coding	Rho GTPase activating protein 12
chr18	6070091	6135804	-	6070091	6111685	5pMXE	0.25	50	50	ENSMUST00000182066.8	ENSMUSG00000041225.17	Arhgap12	chr18	protein_coding	Rho GTPase activating protein 12
chr18	6052923;6056993	6056979;6057517	-	6052923	6057517	cassetteExon	0.5	100	100	ENSMUST00000182066.8	ENSMUSG00000041225.17	Arhgap12	chr18	protein_coding	Rho GTPase activating protein 12
chr18	6064421;6065771	6065705;6069831	-	6064421	6069831	cassetteExon	0.5	100	100	ENSMUST00000182066.8	ENSMUSG00000041225.17	Arhgap12	chr18	protein_coding	Rho GTPase activating protein 12
chr18	6064421;6065845	6065705;6069831	-	6064421	6069831	cassetteExon	0.5	100	100	ENSMUST00000182066.8	ENSMUSG00000041225.17	Arhgap12	chr18	protein_coding	Rho GTPase activating protein 12
chr18	6062250	6064341	-	6061972	6064341	A3SS	0.5	50	50	ENSMUST00000182066.8	ENSMUSG00000041225.17	Arhgap12	chr18	protein_coding	Rho GTPase activating protein 12
chr18	6070091	6073211	-	6070091	6111685	A5SS	0.25	50	50	ENSMUST00000182066.8	ENSMUSG00000041225.17	Arhgap12	chr18	protein_coding	Rho GTPase activating protein 12
chr18	6070091	6092785	-	6070091	6111685	A5SS	0.25	50	50	ENSMUST00000182066.8	ENSMUSG00000041225.17	Arhgap12	chr18	protein_coding	Rho GTPase activating protein 12
chr18	6070091;6073286	6073211;6135804	-	6070091;6115850	6111685;6135804	MXE	0.5	100	100	ENSMUST00000077128.13	ENSMUSG00000041225.17	Arhgap12	chr18	protein_coding	Rho GTPase activating protein 12
chr18	6065771	6069831	-	6065845	6069831	A3SS	0.33	50	50	ENSMUST00000077128.13	ENSMUSG00000041225.17	Arhgap12	chr18	protein_coding	Rho GTPase activating protein 12
chr18	6052923	6056979	-	6052923	6061847	A5SS	0.25	50	50	ENSMUST00000077128.13	ENSMUSG00000041225.17	Arhgap12	chr18	protein_coding	Rho GTPase activating protein 12
chr18	6115850	6135818	-	6115850	6135804	A5SS	0.5	50	50	ENSMUST00000077128.13	ENSMUSG00000041225.17	Arhgap12	chr18	protein_coding	Rho GTPase activating protein 12
chr18	6070091	6135804	-	6070091	6092785	5pMXE	0.25	50	50	ENSMUST00000182101.8	ENSMUSG00000041225.17	Arhgap12	chr18	protein_coding	Rho GTPase activating protein 12
chr18	6070091	6073211	-	6070091	6092785	A5SS	0.25	50	50	ENSMUST00000182101.8	ENSMUSG00000041225.17	Arhgap12	chr18	protein_coding	Rho GTPase activating protein 12
chr18	6070091	6111685	-	6052923	6111685	A3SS	0.5	50	50	ENSMUST00000182921.2	ENSMUSG00000041225.17	Arhgap12	chr18	protein_coding	Rho GTPase activating protein 12
chr18	6052923	6056979	-	6052923	6111685	A5SS	0.25	50	50	ENSMUST00000182921.2	ENSMUSG00000041225.17	Arhgap12	chr18	protein_coding	Rho GTPase activating protein 12
chr18	6052923	6057517	-	6052923	6111685	A5SS	0.25	50	50	ENSMUST00000182921.2	ENSMUSG00000041225.17	Arhgap12	chr18	protein_coding	Rho GTPase activating protein 12
chr18	6052923	6061847	-	6052923	6111685	A5SS	0.25	50	50	ENSMUST00000182921.2	ENSMUSG00000041225.17	Arhgap12	chr18	protein_coding	Rho GTPase activating protein 12
chr18	6052923	6061847	-	6057591	6061847	3pMXE	0.5	50	50	ENSMUST00000182614.8	ENSMUSG00000041225.17	Arhgap12	chr18	protein_coding	Rho GTPase activating protein 12
chr18	6070091;6073286	6073211;6135804	-	6070091	6135804	cassetteExon	0.5	100	100	ENSMUST00000182614.8	ENSMUSG00000041225.17	Arhgap12	chr18	protein_coding	Rho GTPase activating protein 12
chr18	6115850	6135804	-	6070091	6135804	A3SS	0.33	50	50	ENSMUST00000182614.8	ENSMUSG00000041225.17	Arhgap12	chr18	protein_coding	Rho GTPase activating protein 12
chr18	6115850	6135804	-	6073286	6135804	A3SS	0.33	50	50	ENSMUST00000181989.8	ENSMUSG00000041225.17	Arhgap12	chr18	protein_coding	Rho GTPase activating protein 12
chr18	6064421	6069831	-	6065771	6069831	3pMXE	0.33	50	50	ENSMUST00000182178.2	ENSMUSG00000041225.17	Arhgap12	chr18	protein_coding	Rho GTPase activating protein 12
chr18	6441243	6441802	-	6441243	6448905	A5SS	0.5	50	50	ENSMUST00000115870.9	ENSMUSG00000024240.14	Epc1	chr18	protein_coding	enhancer of polycomb homolog 1
chr18	6462991	6490463	-	6462991	6515865	A5SS	0.5	50	50	ENSMUST00000115870.9	ENSMUSG00000024240.14	Epc1	chr18	protein_coding	enhancer of polycomb homolog 1
chr18	6489330	6490463	-	6462991	6490463	A3SS	0.5	50	50	ENSMUST00000028100.13	ENSMUSG00000024240.14	Epc1	chr18	protein_coding	enhancer of polycomb homolog 1
chr18	6490234	6490535	+	6490234	6496668	A3SS	0.5	50	50	ENSMUST00000186159.2	ENSMUSG00000101320.2	Gm28529	chr18	lncRNA	predicted gene 28529
chr18	6620245;6626531	6626323;6629481	+	6620245;6623524	6623466;6629481	MXE	0.5	100	100	ENSMUST00000234821.2	ENSMUSG00000039540.10	4921524L21Rik	chr18	protein_coding	RIKEN cDNA 4921524L21 gene
chr18	6623524	6623954	+	6623524	6629481	A3SS	0.5	50	50	ENSMUST00000234821.2	ENSMUSG00000039540.10	4921524L21Rik	chr18	protein_coding	RIKEN cDNA 4921524L21 gene
chr18	6624053	6626323	+	6620245	6626323	A5SS	0.5	50	50	ENSMUST00000234337.2	ENSMUSG00000039540.10	4921524L21Rik	chr18	protein_coding	RIKEN cDNA 4921524L21 gene
chr18	6770109	6778477	+	6770109	6778495	A3SS	0.5	50	50	ENSMUST00000234356.2	ENSMUSG00000073639.7	Rab18	chr18	protein_coding	RAB18, member RAS oncogene family
chr18	6765332	6770054	+	6734148	6770054	A5SS	0.33	50	50	ENSMUST00000234356.2	ENSMUSG00000073639.7	Rab18	chr18	protein_coding	RAB18, member RAS oncogene family
chr18	6767716	6770054	+	6734148	6770054	A5SS	0.33	50	50	ENSMUST00000234356.2	ENSMUSG00000073639.7	Rab18	chr18	protein_coding	RAB18, member RAS oncogene family
chr18	6784688	6788480	+	6784688;6785005	6784939;6788480	ES	0.5	50	50	ENSMUST00000234810.2	ENSMUSG00000073639.7	Rab18	chr18	protein_coding	RAB18, member RAS oncogene family
chr18	6765332;6767716	6767644;6770054	+	6765332	6770054	cassetteExon	0.5	100	100	ENSMUST00000234810.2	ENSMUSG00000073639.7	Rab18	chr18	protein_coding	RAB18, member RAS oncogene family
chr18	7002623	7003445	-	7002623	7004622	A5SS	0.5	50	50	ENSMUST00000079788.7	ENSMUSG00000061013.7	Mkx	chr18	protein_coding	mohawk homeobox
chr18	7181848	7183980	-	7181848	7211399	A5SS	0.5	50	50	ENSMUST00000234788.2	ENSMUSG00000061802.7	Odad2	chr18	protein_coding	outer dynein arm docking complex subunit 2
chr18	7273275	7273553	-	7273275	7285347	A5SS	0.5	50	50	ENSMUST00000234788.2	ENSMUSG00000061802.7	Odad2	chr18	protein_coding	outer dynein arm docking complex subunit 2
chr18	7297057	7297880	-	7297057	7297908	A5SS	0.5	50	50	ENSMUST00000234788.2	ENSMUSG00000061802.7	Odad2	chr18	protein_coding	outer dynein arm docking complex subunit 2
chr18	7268587	7273159	-	7223676	7273159	A3SS	0.5	50	50	ENSMUST00000234281.2	ENSMUSG00000061802.7	Odad2	chr18	protein_coding	outer dynein arm docking complex subunit 2
chr18	7223676	7265001	-	7223676	7273159	A5SS	0.5	50	50	ENSMUST00000234281.2	ENSMUSG00000061802.7	Odad2	chr18	protein_coding	outer dynein arm docking complex subunit 2
chr18	7401438	7403186	-	7380069	7403186	A3SS	0.5	50	50	ENSMUST00000115869.4	ENSMUSG00000057440.9	Mpp7	chr18	protein_coding	membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
chr18	7430415	7439569	-	7403356	7439569	A3SS	0.33	50	50	ENSMUST00000115869.4	ENSMUSG00000057440.9	Mpp7	chr18	protein_coding	membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
chr18	7438032	7439569	-	7403356	7439569	A3SS	0.33	50	50	ENSMUST00000115869.4	ENSMUSG00000057440.9	Mpp7	chr18	protein_coding	membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
chr18	7403356	7429283	-	7403356	7439569	A5SS	0.5	50	50	ENSMUST00000115869.4	ENSMUSG00000057440.9	Mpp7	chr18	protein_coding	membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
chr18	7461715	7465803	-	7461715	7512944	A5SS	0.5	50	50	ENSMUST00000115869.4	ENSMUSG00000057440.9	Mpp7	chr18	protein_coding	membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
chr18	7561872	7572641	-	7561872	7626733	A5SS	0.25	50	50	ENSMUST00000115869.4	ENSMUSG00000057440.9	Mpp7	chr18	protein_coding	membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
chr18	7561872	7608914	-	7561872	7626733	A5SS	0.25	50	50	ENSMUST00000115869.4	ENSMUSG00000057440.9	Mpp7	chr18	protein_coding	membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
chr18	7561872	7626729	-	7561872	7626733	A5SS	0.25	50	50	ENSMUST00000115869.4	ENSMUSG00000057440.9	Mpp7	chr18	protein_coding	membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
chr18	7561872	7572641	-	7561872	7626729	A5SS	0.25	50	50	ENSMUST00000235093.2	ENSMUSG00000057440.9	Mpp7	chr18	protein_coding	membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
chr18	7561872	7608914	-	7561872	7626729	A5SS	0.25	50	50	ENSMUST00000235093.2	ENSMUSG00000057440.9	Mpp7	chr18	protein_coding	membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
chr18	7438032	7439569	-	7430415	7439569	A3SS	0.33	50	50	ENSMUST00000234812.2	ENSMUSG00000057440.9	Mpp7	chr18	protein_coding	membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
chr18	7608009	7608914	-	7561872	7608914	A3SS	0.5	50	50	ENSMUST00000234874.2	ENSMUSG00000057440.9	Mpp7	chr18	protein_coding	membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
chr18	7561872	7572641	-	7561872	7608914	A5SS	0.25	50	50	ENSMUST00000234874.2	ENSMUSG00000057440.9	Mpp7	chr18	protein_coding	membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
chr18	7906044;7910824	7910516;7916052	+	7906044	7916052	cassetteExon	0.5	100	100	ENSMUST00000171042.8	ENSMUSG00000024283.16	Wac	chr18	protein_coding	WW domain containing adaptor with coiled-coil
chr18	7870027	7871531	+	7870027	7871549	A3SS	0.5	50	50	ENSMUST00000171042.8	ENSMUSG00000024283.16	Wac	chr18	protein_coding	WW domain containing adaptor with coiled-coil
chr18	7916297	7917553	+	7916297	7917565	A3SS	0.33	50	50	ENSMUST00000171042.8	ENSMUSG00000024283.16	Wac	chr18	protein_coding	WW domain containing adaptor with coiled-coil
chr18	7916297	7917562	+	7916297	7917565	A3SS	0.33	50	50	ENSMUST00000171042.8	ENSMUSG00000024283.16	Wac	chr18	protein_coding	WW domain containing adaptor with coiled-coil
chr18	7920250	7921425	+	7920250	7921422	A3SS	0.5	50	50	ENSMUST00000171042.8	ENSMUSG00000024283.16	Wac	chr18	protein_coding	WW domain containing adaptor with coiled-coil
chr18	7869459	7869991	+	7869091	7869991	A5SS	0.2	50	50	ENSMUST00000171042.8	ENSMUSG00000024283.16	Wac	chr18	protein_coding	WW domain containing adaptor with coiled-coil
chr18	7869577	7869991	+	7869091	7869991	A5SS	0.2	50	50	ENSMUST00000171042.8	ENSMUSG00000024283.16	Wac	chr18	protein_coding	WW domain containing adaptor with coiled-coil
chr18	7869615	7869991	+	7869091	7869991	A5SS	0.2	50	50	ENSMUST00000171042.8	ENSMUSG00000024283.16	Wac	chr18	protein_coding	WW domain containing adaptor with coiled-coil
chr18	7869889	7869991	+	7869091	7869991	A5SS	0.2	50	50	ENSMUST00000171042.8	ENSMUSG00000024283.16	Wac	chr18	protein_coding	WW domain containing adaptor with coiled-coil
chr18	7910824	7916031	+	7910824	7916052	A3SS	0.5	50	50	ENSMUST00000074919.11	ENSMUSG00000024283.16	Wac	chr18	protein_coding	WW domain containing adaptor with coiled-coil
chr18	7916297	7917562	+	7916297	7917553	A3SS	0.33	50	50	ENSMUST00000074919.11	ENSMUSG00000024283.16	Wac	chr18	protein_coding	WW domain containing adaptor with coiled-coil
chr18	7869577	7869991	+	7869459	7869991	A5SS	0.2	50	50	ENSMUST00000170932.8	ENSMUSG00000024283.16	Wac	chr18	protein_coding	WW domain containing adaptor with coiled-coil
chr18	7869615	7869991	+	7869459	7869991	A5SS	0.2	50	50	ENSMUST00000170932.8	ENSMUSG00000024283.16	Wac	chr18	protein_coding	WW domain containing adaptor with coiled-coil
chr18	7869889	7869991	+	7869459	7869991	A5SS	0.2	50	50	ENSMUST00000170932.8	ENSMUSG00000024283.16	Wac	chr18	protein_coding	WW domain containing adaptor with coiled-coil
chr18	7869577	7869991	+	7869615	7869991	A5SS	0.2	50	50	ENSMUST00000167020.8	ENSMUSG00000024283.16	Wac	chr18	protein_coding	WW domain containing adaptor with coiled-coil
chr18	7869889	7869991	+	7869615	7869991	A5SS	0.2	50	50	ENSMUST00000167020.8	ENSMUSG00000024283.16	Wac	chr18	protein_coding	WW domain containing adaptor with coiled-coil
chr18	7869889	7869991	+	7869577	7869991	A5SS	0.2	50	50	ENSMUST00000172018.8	ENSMUSG00000024283.16	Wac	chr18	protein_coding	WW domain containing adaptor with coiled-coil
chr18	7906044	7916052	+	7906044	7910516	A3SS&ES	0.5	50	50	ENSMUST00000165854.8	ENSMUSG00000024283.16	Wac	chr18	protein_coding	WW domain containing adaptor with coiled-coil
chr18	7906044	7916052	+	7910824	7916052	5pMXE	0.5	50	50	ENSMUST00000167057.2	ENSMUSG00000024283.16	Wac	chr18	protein_coding	WW domain containing adaptor with coiled-coil
chr18	8183520	8185659	+	8182231	8185659	A5SS	0.5	50	50	ENSMUST00000234784.2	ENSMUSG00000117490.2	Gm35031	chr18	lncRNA	predicted gene, 35031
chr18	9377828	9449518	-	9377828;9386809	9386735;9449518	ES	0.5	50	50	ENSMUST00000053917.6	ENSMUSG00000024286.9	Ccny	chr18	protein_coding	cyclin Y
chr18	9349423;9386809	9386735;9449518	-	9349423;9377828	9353407;9449518	MXE	0.5	100	100	ENSMUST00000234102.2	ENSMUSG00000024286.9	Ccny	chr18	protein_coding	cyclin Y
chr18	9345471;9377828	9377794;9386735	-	9345471;9349423	9349388;9386735	MXE	0.5	100	100	ENSMUST00000234779.2	ENSMUSG00000024286.9	Ccny	chr18	protein_coding	cyclin Y
chr18	9349423	9353407	-	9349423	9386735	A5SS	0.5	50	50	ENSMUST00000234779.2	ENSMUSG00000024286.9	Ccny	chr18	protein_coding	cyclin Y
chr18	9353507	9377794	-	9345471	9377794	A3SS	0.5	50	50	ENSMUST00000234844.2	ENSMUSG00000024286.9	Ccny	chr18	protein_coding	cyclin Y
chr18	9377828	9449518	-	9386809	9449518	3pMXE	0.5	50	50	ENSMUST00000234382.2	ENSMUSG00000024286.9	Ccny	chr18	protein_coding	cyclin Y
chr18	9849150;9854605	9854532;9858546	+	9849150	9858546	cassetteExon	0.5	100	100	ENSMUST00000234965.2	ENSMUSG00000036103.10	Colec12	chr18	protein_coding	collectin sub-family member 12
chr18	9987165	9989649	+	9987165	9987599	A3SS&ES	0.5	50	50	ENSMUST00000025137.9	ENSMUSG00000024287.9	Thoc1	chr18	protein_coding	THO complex 1
chr18	9958421	9959098	+	9958246	9959098	A5SS	0.5	50	50	ENSMUST00000025137.9	ENSMUSG00000024287.9	Thoc1	chr18	protein_coding	THO complex 1
chr18	9984534	9987070	+	9984534	9986289	3pMXE	0.5	50	50	ENSMUST00000234324.2	ENSMUSG00000024287.9	Thoc1	chr18	protein_coding	THO complex 1
chr18	9984534;9986761	9986289;9987070	+	9984534	9987070	cassetteExon	0.5	100	100	ENSMUST00000234975.2	ENSMUSG00000024287.9	Thoc1	chr18	protein_coding	THO complex 1
chr18	10016644	10022818	-	10016644;10018095	10017991;10022818	ES	0.5	50	50	ENSMUST00000092096.14	ENSMUSG00000047879.18	Usp14	chr18	protein_coding	ubiquitin specific peptidase 14
chr18	10024679	10044929	-	10024679	10029913	5pMXE	0.5	50	50	ENSMUST00000092096.14	ENSMUSG00000047879.18	Usp14	chr18	protein_coding	ubiquitin specific peptidase 14
chr18	10073185;10073700	10073657;10079115	-	10073185	10079115	cassetteExon	0.5	100	100	ENSMUST00000067947.7	ENSMUSG00000024290.10	Rock1	chr18	protein_coding	Rho-associated coiled-coil containing protein kinase 1
chr18	10116859	10119885	-	10116862	10119885	A3SS	0.5	50	50	ENSMUST00000067947.7	ENSMUSG00000024290.10	Rock1	chr18	protein_coding	Rho-associated coiled-coil containing protein kinase 1
chr18	10476788;10495225	10495097;10498951	+	10476788	10498951	cassetteExon	0.5	100	100	ENSMUST00000173356.8	ENSMUSG00000042942.19	Greb1l	chr18	protein_coding	growth regulation by estrogen in breast cancer-like
chr18	10503343	10510628	+	10503343;10509409	10509083;10510628	ES	0.5	50	50	ENSMUST00000048977.16	ENSMUSG00000042942.19	Greb1l	chr18	protein_coding	growth regulation by estrogen in breast cancer-like
chr18	10515391	10523207	+	10515391;10522268	10522088;10523207	ES	0.5	50	50	ENSMUST00000048977.16	ENSMUSG00000042942.19	Greb1l	chr18	protein_coding	growth regulation by estrogen in breast cancer-like
chr18	10556027	10557379	+	10556027	10557240	A3SS	0.5	50	50	ENSMUST00000048977.16	ENSMUSG00000042942.19	Greb1l	chr18	protein_coding	growth regulation by estrogen in breast cancer-like
chr18	10503343	10510628	+	10509409	10510628	5pMXE	0.5	50	50	ENSMUST00000174553.2	ENSMUSG00000042942.19	Greb1l	chr18	protein_coding	growth regulation by estrogen in breast cancer-like
chr18	10588550	10596339	-	10588550;10595875	10593746;10596339	ES	0.33	50	50	ENSMUST00000025142.13	ENSMUSG00000024293.17	Esco1	chr18	protein_coding	establishment of sister chromatid cohesion N-acetyltransferase 1
chr18	10577090;10577759	10577638;10582055	-	10577090	10582055	cassetteExon	0.5	100	100	ENSMUST00000025142.13	ENSMUSG00000024293.17	Esco1	chr18	protein_coding	establishment of sister chromatid cohesion N-acetyltransferase 1
chr18	10586041	10595676	-	10586041	10588439	A5SS&ES	0.33	50	50	ENSMUST00000025142.13	ENSMUSG00000024293.17	Esco1	chr18	protein_coding	establishment of sister chromatid cohesion N-acetyltransferase 1
chr18	10588550	10595676	-	10588550	10593746	A5SS	0.25	50	50	ENSMUST00000025142.13	ENSMUSG00000024293.17	Esco1	chr18	protein_coding	establishment of sister chromatid cohesion N-acetyltransferase 1
chr18	10586041	10596339	-	10586041;10588550	10588439;10596339	ES	0.33	50	50	ENSMUST00000097670.10	ENSMUSG00000024293.17	Esco1	chr18	protein_coding	establishment of sister chromatid cohesion N-acetyltransferase 1
chr18	10588550	10610026	-	10588550;10596441	10596339;10610026	ES	0.5	50	50	ENSMUST00000097670.10	ENSMUSG00000024293.17	Esco1	chr18	protein_coding	establishment of sister chromatid cohesion N-acetyltransferase 1
chr18	10586041;10595875	10595676;10596339	-	10586041;10588550	10588439;10596339	MXE	0.5	100	100	ENSMUST00000097670.10	ENSMUSG00000024293.17	Esco1	chr18	protein_coding	establishment of sister chromatid cohesion N-acetyltransferase 1
chr18	10588550;10595875	10595676;10596339	-	10588550	10596339	cassetteExon	0.5	100	100	ENSMUST00000097670.10	ENSMUSG00000024293.17	Esco1	chr18	protein_coding	establishment of sister chromatid cohesion N-acetyltransferase 1
chr18	10588550	10593746	-	10588550	10596339	A5SS	0.25	50	50	ENSMUST00000097670.10	ENSMUSG00000024293.17	Esco1	chr18	protein_coding	establishment of sister chromatid cohesion N-acetyltransferase 1
chr18	10586041	10596339	-	10586041;10595875	10595676;10596339	ES	0.33	50	50	ENSMUST00000115864.8	ENSMUSG00000024293.17	Esco1	chr18	protein_coding	establishment of sister chromatid cohesion N-acetyltransferase 1
chr18	10586041;10588550	10588439;10595676	-	10586041	10595676	cassetteExon	0.5	100	100	ENSMUST00000115864.8	ENSMUSG00000024293.17	Esco1	chr18	protein_coding	establishment of sister chromatid cohesion N-acetyltransferase 1
chr18	10586041;10588550	10588439;10610026	-	10586041;10596441	10595676;10610026	MXE	0.5	100	100	ENSMUST00000115864.8	ENSMUSG00000024293.17	Esco1	chr18	protein_coding	establishment of sister chromatid cohesion N-acetyltransferase 1
chr18	10586041;10588550	10588439;10610026	-	10586041;10596441	10596339;10610026	MXE	0.5	100	100	ENSMUST00000234347.2	ENSMUSG00000024293.17	Esco1	chr18	protein_coding	establishment of sister chromatid cohesion N-acetyltransferase 1
chr18	10588550	10593746	-	10588550	10610026	A5SS	0.25	50	50	ENSMUST00000234090.2	ENSMUSG00000024293.17	Esco1	chr18	protein_coding	establishment of sister chromatid cohesion N-acetyltransferase 1
chr18	10588550	10595676	-	10588550	10610026	A5SS	0.25	50	50	ENSMUST00000234090.2	ENSMUSG00000024293.17	Esco1	chr18	protein_coding	establishment of sister chromatid cohesion N-acetyltransferase 1
chr18	10588550	10610026	-	10596441	10610026	3pMXE	0.5	50	50	ENSMUST00000234151.2	ENSMUSG00000024293.17	Esco1	chr18	protein_coding	establishment of sister chromatid cohesion N-acetyltransferase 1
chr18	10623707	10626949	+	10623707	10626826	A3SS	0.5	50	50	ENSMUST00000002551.5	ENSMUSG00000002477.6	Snrpd1	chr18	protein_coding	small nuclear ribonucleoprotein D1
chr18	10623707	10626826	+	10623707	10639534	A3SS	0.33	50	50	ENSMUST00000235020.2	ENSMUSG00000002477.6	Snrpd1	chr18	protein_coding	small nuclear ribonucleoprotein D1
chr18	10623707	10626949	+	10623707	10639534	A3SS	0.33	50	50	ENSMUST00000235020.2	ENSMUSG00000002477.6	Snrpd1	chr18	protein_coding	small nuclear ribonucleoprotein D1
chr18	10634061	10639534	+	10623707	10639534	A5SS	0.5	50	50	ENSMUST00000235020.2	ENSMUSG00000002477.6	Snrpd1	chr18	protein_coding	small nuclear ribonucleoprotein D1
chr18	10645181	10647726	-	10642266	10647726	A3SS	0.25	50	50	ENSMUST00000002549.9	ENSMUSG00000002475.17	Abhd3	chr18	protein_coding	abhydrolase domain containing 3
chr18	10645223	10647726	-	10642266	10647726	A3SS	0.25	50	50	ENSMUST00000002549.9	ENSMUSG00000002475.17	Abhd3	chr18	protein_coding	abhydrolase domain containing 3
chr18	10645235	10647726	-	10642266	10647726	A3SS	0.25	50	50	ENSMUST00000002549.9	ENSMUSG00000002475.17	Abhd3	chr18	protein_coding	abhydrolase domain containing 3
chr18	10658892	10662978	-	10658892	10682069	A5SS	0.5	50	50	ENSMUST00000002549.9	ENSMUSG00000002475.17	Abhd3	chr18	protein_coding	abhydrolase domain containing 3
chr18	10645181	10647726	-	10645235	10647726	A3SS	0.25	50	50	ENSMUST00000117828.9	ENSMUSG00000002475.17	Abhd3	chr18	protein_coding	abhydrolase domain containing 3
chr18	10645223	10647726	-	10645235	10647726	A3SS	0.25	50	50	ENSMUST00000117828.9	ENSMUSG00000002475.17	Abhd3	chr18	protein_coding	abhydrolase domain containing 3
chr18	10645181	10647726	-	10645223	10647726	A3SS	0.25	50	50	ENSMUST00000117726.9	ENSMUSG00000002475.17	Abhd3	chr18	protein_coding	abhydrolase domain containing 3
chr18	10812156	10815736	+	10812156	10817819	A3SS	0.5	50	50	ENSMUST00000124288.8	ENSMUSG00000024294.15	Mib1	chr18	protein_coding	mindbomb E3 ubiquitin protein ligase 1
chr18	11045005	11047555	-	11001223	11047555	A3SS	0.5	50	50	ENSMUST00000232314.2	ENSMUSG00000097222.3	Gata6os	chr18	lncRNA	GATA binding protein 6, opposite strand
chr18	11050256	11050624	-	11047678	11050624	A3SS	0.5	50	50	ENSMUST00000231895.2	ENSMUSG00000097222.3	Gata6os	chr18	lncRNA	GATA binding protein 6, opposite strand
chr18	11053374	11054036	+	11052743	11054036	A5SS	0.5	50	50	ENSMUST00000234512.2	ENSMUSG00000005836.11	Gata6	chr18	protein_coding	GATA binding protein 6
chr18	11793998	11810652	+	11793998;11805681	11805639;11810652	ES	0.5	50	50	ENSMUST00000115861.9	ENSMUSG00000041238.17	Rbbp8	chr18	protein_coding	retinoblastoma binding protein 8, endonuclease
chr18	11805681	11826069	+	11805681;11810747	11810652;11826069	ES	0.5	50	50	ENSMUST00000115861.9	ENSMUSG00000041238.17	Rbbp8	chr18	protein_coding	retinoblastoma binding protein 8, endonuclease
chr18	11855582	11858464	+	11855582;11855787	11855661;11858464	ES	0.5	50	50	ENSMUST00000115861.9	ENSMUSG00000041238.17	Rbbp8	chr18	protein_coding	retinoblastoma binding protein 8, endonuclease
chr18	11851987	11853567	+	11851987	11853602	A3SS	0.5	50	50	ENSMUST00000115861.9	ENSMUSG00000041238.17	Rbbp8	chr18	protein_coding	retinoblastoma binding protein 8, endonuclease
chr18	11790749	11793792	+	11766581	11793792	A5SS	0.33	50	50	ENSMUST00000115861.9	ENSMUSG00000041238.17	Rbbp8	chr18	protein_coding	retinoblastoma binding protein 8, endonuclease
chr18	11791030	11793792	+	11766581	11793792	A5SS	0.33	50	50	ENSMUST00000115861.9	ENSMUSG00000041238.17	Rbbp8	chr18	protein_coding	retinoblastoma binding protein 8, endonuclease
chr18	11793998;11810747	11810652;11826069	+	11793998;11805681	11805639;11826069	MXE	0.5	100	100	ENSMUST00000235039.2	ENSMUSG00000041238.17	Rbbp8	chr18	protein_coding	retinoblastoma binding protein 8, endonuclease
chr18	11791030	11793792	+	11790749	11793792	A5SS	0.33	50	50	ENSMUST00000234984.2	ENSMUSG00000041238.17	Rbbp8	chr18	protein_coding	retinoblastoma binding protein 8, endonuclease
chr18	11793998	11810652	+	11793998	11805639	3pMXE	0.5	50	50	ENSMUST00000234074.2	ENSMUSG00000041238.17	Rbbp8	chr18	protein_coding	retinoblastoma binding protein 8, endonuclease
chr18	11805681	11826069	+	11805681	11810652	3pMXE	0.5	50	50	ENSMUST00000234744.2	ENSMUSG00000041238.17	Rbbp8	chr18	protein_coding	retinoblastoma binding protein 8, endonuclease
chr18	11855582	11858464	+	11855582	11855661	3pMXE	0.5	50	50	ENSMUST00000234161.2	ENSMUSG00000041238.17	Rbbp8	chr18	protein_coding	retinoblastoma binding protein 8, endonuclease
chr18	12021886	12056417	+	12021886;12039059	12038982;12056417	ES	0.5	50	50	ENSMUST00000171109.9	ENSMUSG00000040957.16	Cables1	chr18	protein_coding	CDK5 and Abl enzyme substrate 1
chr18	11977795	12015771	+	11973590	12015771	A5SS	0.5	50	50	ENSMUST00000171109.9	ENSMUSG00000040957.16	Cables1	chr18	protein_coding	CDK5 and Abl enzyme substrate 1
chr18	12197296;12199764	12199673;12200117	-	12197296	12200117	cassetteExon	0.5	100	100	ENSMUST00000209628.2	ENSMUSG00000049411.16	Tmem241	chr18	protein_coding	transmembrane protein 241
chr18	12116650	12126621	-	12097715	12126621	A3SS	0.33	50	50	ENSMUST00000209628.2	ENSMUSG00000049411.16	Tmem241	chr18	protein_coding	transmembrane protein 241
chr18	12116699	12126621	-	12097715	12126621	A3SS	0.33	50	50	ENSMUST00000209628.2	ENSMUSG00000049411.16	Tmem241	chr18	protein_coding	transmembrane protein 241
chr18	12246529	12254438	-	12246529;12251507	12251461;12254438	ES	0.5	50	50	ENSMUST00000050228.15	ENSMUSG00000049411.16	Tmem241	chr18	protein_coding	transmembrane protein 241
chr18	12116699	12126621	-	12116650	12126621	A3SS	0.33	50	50	ENSMUST00000050228.15	ENSMUSG00000049411.16	Tmem241	chr18	protein_coding	transmembrane protein 241
chr18	12237237	12246452	-	12207700	12246452	A3SS	0.33	50	50	ENSMUST00000050228.15	ENSMUSG00000049411.16	Tmem241	chr18	protein_coding	transmembrane protein 241
chr18	12239060	12246452	-	12207700	12246452	A3SS	0.33	50	50	ENSMUST00000050228.15	ENSMUSG00000049411.16	Tmem241	chr18	protein_coding	transmembrane protein 241
chr18	12207700	12217049	-	12207700	12246452	A5SS	0.5	50	50	ENSMUST00000050228.15	ENSMUSG00000049411.16	Tmem241	chr18	protein_coding	transmembrane protein 241
chr18	12237237;12239060	12238911;12246452	-	12237237	12246452	cassetteExon	0.5	100	100	ENSMUST00000055447.14	ENSMUSG00000049411.16	Tmem241	chr18	protein_coding	transmembrane protein 241
chr18	12197296	12200117	-	12199764	12200117	3pMXE	0.5	50	50	ENSMUST00000092075.5	ENSMUSG00000049411.16	Tmem241	chr18	protein_coding	transmembrane protein 241
chr18	12272517	12281848	+	12272517;12276120	12275993;12281848	ES	0.33	50	50	ENSMUST00000025270.8	ENSMUSG00000024404.8	Riok3	chr18	protein_coding	RIO kinase 3
chr18	12286117	12288277	+	12286117;12287077	12286970;12288277	ES	0.5	50	50	ENSMUST00000025270.8	ENSMUSG00000024404.8	Riok3	chr18	protein_coding	RIO kinase 3
chr18	12270406	12270902	+	12270406	12272374	A3SS	0.5	50	50	ENSMUST00000025270.8	ENSMUSG00000024404.8	Riok3	chr18	protein_coding	RIO kinase 3
chr18	12282045	12282683	+	12282045	12282576	A3SS	0.5	50	50	ENSMUST00000025270.8	ENSMUSG00000024404.8	Riok3	chr18	protein_coding	RIO kinase 3
chr18	12276251	12281848	+	12276120	12281848	A5SS	0.33	50	50	ENSMUST00000025270.8	ENSMUSG00000024404.8	Riok3	chr18	protein_coding	RIO kinase 3
chr18	12281902	12282576	+	12282045	12282576	A5SS	0.5	50	50	ENSMUST00000025270.8	ENSMUSG00000024404.8	Riok3	chr18	protein_coding	RIO kinase 3
chr18	12272517	12281848	+	12272517;12276251	12275993;12281848	ES	0.33	50	50	ENSMUST00000234148.2	ENSMUSG00000024404.8	Riok3	chr18	protein_coding	RIO kinase 3
chr18	12272517	12285856	+	12272517	12281848	3pMXE	0.33	50	50	ENSMUST00000234931.2	ENSMUSG00000024404.8	Riok3	chr18	protein_coding	RIO kinase 3
chr18	12272517	12275993	+	12272517	12285856	A3SS	0.33	50	50	ENSMUST00000234985.2	ENSMUSG00000024404.8	Riok3	chr18	protein_coding	RIO kinase 3
chr18	12282735	12285856	+	12272517	12285856	A5SS	0.5	50	50	ENSMUST00000234985.2	ENSMUSG00000024404.8	Riok3	chr18	protein_coding	RIO kinase 3
chr18	12301959	12304606	+	12301959;12302366	12302290;12304606	ES	0.5	50	50	ENSMUST00000126523.9	ENSMUSG00000024410.16	Rmc1	chr18	protein_coding	regulator of MON1-CCZ1
chr18	12322442	12323397	+	12322442	12322863	3pMXE	0.33	50	50	ENSMUST00000025276.15	ENSMUSG00000024410.16	Rmc1	chr18	protein_coding	regulator of MON1-CCZ1
chr18	12317080	12317296	+	12317080	12317266	A3SS	0.5	50	50	ENSMUST00000025276.15	ENSMUSG00000024410.16	Rmc1	chr18	protein_coding	regulator of MON1-CCZ1
chr18	12317319	12317969	+	12317319	12317949	A3SS	0.5	50	50	ENSMUST00000025276.15	ENSMUSG00000024410.16	Rmc1	chr18	protein_coding	regulator of MON1-CCZ1
chr18	12322138	12322271	+	12322138	12322217	A3SS	0.5	50	50	ENSMUST00000025276.15	ENSMUSG00000024410.16	Rmc1	chr18	protein_coding	regulator of MON1-CCZ1
chr18	12322442	12322541	+	12322442	12322863	A3SS	0.33	50	50	ENSMUST00000025276.15	ENSMUSG00000024410.16	Rmc1	chr18	protein_coding	regulator of MON1-CCZ1
chr18	12322442	12323397	+	12322442	12322541	3pMXE	0.33	50	50	ENSMUST00000234814.2	ENSMUSG00000024410.16	Rmc1	chr18	protein_coding	regulator of MON1-CCZ1
chr18	12345325	12345445	-	12345325	12346314	A5SS	0.5	50	50	ENSMUST00000025279.6	ENSMUSG00000024413.15	Npc1	chr18	protein_coding	NPC intracellular cholesterol transporter 1
chr18	12356212	12356983	-	12356212	12369238	A5SS	0.5	50	50	ENSMUST00000025279.6	ENSMUSG00000024413.15	Npc1	chr18	protein_coding	NPC intracellular cholesterol transporter 1
chr18	12387758	12395169	-	12387758;12394089	12393991;12395169	ES	0.5	50	50	ENSMUST00000118525.9	ENSMUSG00000057766.15	Ankrd29	chr18	protein_coding	ankyrin repeat domain 29
chr18	12415458	12428936	-	12415458;12423872	12423774;12428936	ES	0.5	50	50	ENSMUST00000118525.9	ENSMUSG00000057766.15	Ankrd29	chr18	protein_coding	ankyrin repeat domain 29
chr18	12423872	12438668	-	12423872;12429046	12428936;12438668	ES	0.33	50	50	ENSMUST00000118525.9	ENSMUSG00000057766.15	Ankrd29	chr18	protein_coding	ankyrin repeat domain 29
chr18	12401605	12404711	-	12401605	12408763	A5SS	0.33	50	50	ENSMUST00000118525.9	ENSMUSG00000057766.15	Ankrd29	chr18	protein_coding	ankyrin repeat domain 29
chr18	12401605	12408767	-	12401605	12408763	A5SS	0.33	50	50	ENSMUST00000118525.9	ENSMUSG00000057766.15	Ankrd29	chr18	protein_coding	ankyrin repeat domain 29
chr18	12401605	12408767	-	12401605	12404711	5pMXE	0.33	50	50	ENSMUST00000137948.2	ENSMUSG00000057766.15	Ankrd29	chr18	protein_coding	ankyrin repeat domain 29
chr18	12415458	12438668	-	12415458;12423872	12423774;12438668	ES	0.33	50	50	ENSMUST00000234183.2	ENSMUSG00000057766.15	Ankrd29	chr18	protein_coding	ankyrin repeat domain 29
chr18	12415458;12429046	12428936;12438668	-	12415458;12423872	12423774;12438668	MXE	0.5	100	100	ENSMUST00000234183.2	ENSMUSG00000057766.15	Ankrd29	chr18	protein_coding	ankyrin repeat domain 29
chr18	12387758	12395169	-	12394089	12395169	3pMXE	0.5	50	50	ENSMUST00000234405.2	ENSMUSG00000057766.15	Ankrd29	chr18	protein_coding	ankyrin repeat domain 29
chr18	12415458	12438668	-	12415458	12428936	5pMXE	0.33	50	50	ENSMUST00000234212.2	ENSMUSG00000057766.15	Ankrd29	chr18	protein_coding	ankyrin repeat domain 29
chr18	12415458;12429046	12428936;12438668	-	12415458	12438668	cassetteExon	0.5	100	100	ENSMUST00000142066.2	ENSMUSG00000057766.15	Ankrd29	chr18	protein_coding	ankyrin repeat domain 29
chr18	12637452	12639978	+	12636221	12639978	A5SS	0.5	50	50	ENSMUST00000092070.13	ENSMUSG00000024421.17	Lama3	chr18	protein_coding	laminin, alpha 3
chr18	12831116	12831392	+	12831116	12853007	A3SS	0.5	50	50	ENSMUST00000234974.2	ENSMUSG00000024424.16	Ttc39c	chr18	protein_coding	tetratricopeptide repeat domain 39C
chr18	12776530	12817894	+	12733060	12817894	A5SS	0.33	50	50	ENSMUST00000234974.2	ENSMUSG00000024424.16	Ttc39c	chr18	protein_coding	tetratricopeptide repeat domain 39C
chr18	12777100	12817894	+	12733060	12817894	A5SS	0.33	50	50	ENSMUST00000234974.2	ENSMUSG00000024424.16	Ttc39c	chr18	protein_coding	tetratricopeptide repeat domain 39C
chr18	12828647	12830948	+	12828619	12830948	A5SS	0.5	50	50	ENSMUST00000234974.2	ENSMUSG00000024424.16	Ttc39c	chr18	protein_coding	tetratricopeptide repeat domain 39C
chr18	12868048	12869037	+	12868048	12869015	A3SS	0.5	50	50	ENSMUST00000234255.2	ENSMUSG00000024424.16	Ttc39c	chr18	protein_coding	tetratricopeptide repeat domain 39C
chr18	12776530	12817894	+	12777100	12817894	A5SS	0.33	50	50	ENSMUST00000141060.2	ENSMUSG00000024424.16	Ttc39c	chr18	protein_coding	tetratricopeptide repeat domain 39C
chr18	12884061	12888121	+	12884061;12887520	12886918;12888121	ES	0.33	50	50	ENSMUST00000234735.2	ENSMUSG00000024430.15	Cabyr	chr18	protein_coding	calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)
chr18	12884061	12887401	+	12884061	12886918	A3SS	0.33	50	50	ENSMUST00000234735.2	ENSMUSG00000024430.15	Cabyr	chr18	protein_coding	calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)
chr18	12874458	12877549	+	12873596	12877549	A5SS	0.5	50	50	ENSMUST00000234735.2	ENSMUSG00000024430.15	Cabyr	chr18	protein_coding	calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)
chr18	12884885	12886918	+	12884061	12886918	A5SS	0.5	50	50	ENSMUST00000234735.2	ENSMUSG00000024430.15	Cabyr	chr18	protein_coding	calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)
chr18	12884885	12888121	+	12887520	12888121	A5SS&ES	0.33	50	50	ENSMUST00000234735.2	ENSMUSG00000024430.15	Cabyr	chr18	protein_coding	calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)
chr18	12884061;12887520	12887401;12888121	+	12884061	12888121	cassetteExon	0.5	100	100	ENSMUST00000235000.2	ENSMUSG00000024430.15	Cabyr	chr18	protein_coding	calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)
chr18	12884061	12886918	+	12884061	12888121	A3SS	0.33	50	50	ENSMUST00000235000.2	ENSMUSG00000024430.15	Cabyr	chr18	protein_coding	calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)
chr18	12884885	12888121	+	12884061	12888121	A5SS	0.33	50	50	ENSMUST00000235000.2	ENSMUSG00000024430.15	Cabyr	chr18	protein_coding	calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)
chr18	12884885;12887520	12887401;12888121	+	12884885	12888121	cassetteExon	0.5	100	100	ENSMUST00000115857.9	ENSMUSG00000024430.15	Cabyr	chr18	protein_coding	calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)
chr18	12884885	12886918	+	12884885	12888121	A3SS	0.33	50	50	ENSMUST00000115857.9	ENSMUSG00000024430.15	Cabyr	chr18	protein_coding	calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)
chr18	12884885	12888121	+	12884885;12887520	12886918;12888121	ES	0.33	50	50	ENSMUST00000080415.11	ENSMUSG00000024430.15	Cabyr	chr18	protein_coding	calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)
chr18	12884885	12887401	+	12884885	12886918	A3SS	0.33	50	50	ENSMUST00000080415.11	ENSMUSG00000024430.15	Cabyr	chr18	protein_coding	calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)
chr18	12884061	12888121	+	12887520	12888121	A5SS&ES	0.33	50	50	ENSMUST00000080415.11	ENSMUSG00000024430.15	Cabyr	chr18	protein_coding	calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)
chr18	12884061	12887401	+	12884885	12887401	A5SS	0.5	50	50	ENSMUST00000150758.8	ENSMUSG00000024430.15	Cabyr	chr18	protein_coding	calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)
chr18	12921452	12974241	-	12921452;12952718	12952562;12974241	ES	0.5	50	50	ENSMUST00000121808.8	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12952718	12995164	-	12952718;12974403	12974241;12995164	ES	0.33	50	50	ENSMUST00000121808.8	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	12996129	-	12974403	12995164	5pMXE	0.11	50	50	ENSMUST00000121808.8	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	12996200	-	12974403	12995164	5pMXE	0.11	50	50	ENSMUST00000121808.8	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	13002094	-	12974403	12995164	5pMXE	0.11	50	50	ENSMUST00000121808.8	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	13004135	-	12974403	12995164	5pMXE	0.11	50	50	ENSMUST00000121808.8	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12904490;12907382	12907286;12921377	-	12904490	12921377	cassetteExon	0.5	100	100	ENSMUST00000121808.8	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	12987472	-	12974403	12995164	A5SS	0.11	50	50	ENSMUST00000121808.8	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	12988282	-	12974403	12995164	A5SS	0.11	50	50	ENSMUST00000121808.8	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	12993042	-	12974403	12995164	A5SS	0.11	50	50	ENSMUST00000121808.8	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	12994181	-	12974403	12995164	A5SS	0.11	50	50	ENSMUST00000121808.8	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	13066759;13071149	13071060;13074689	-	13066759	13074689	cassetteExon	0.5	100	100	ENSMUST00000074352.11	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	13062146	13066637	-	13062150	13066637	A3SS	0.5	50	50	ENSMUST00000074352.11	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12921452	12995164	-	12921452	12952562	A5SS&ES	0.33	50	50	ENSMUST00000074352.11	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12952718	12995164	-	12952718	12974241	A5SS&ES	0.33	50	50	ENSMUST00000074352.11	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12952718	12996200	-	12952718	12974241	A5SS&ES	0.33	50	50	ENSMUST00000074352.11	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	12987472	-	12974403	13004135	A5SS	0.11	50	50	ENSMUST00000074352.11	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	12988282	-	12974403	13004135	A5SS	0.11	50	50	ENSMUST00000074352.11	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	12993042	-	12974403	13004135	A5SS	0.11	50	50	ENSMUST00000074352.11	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	12994181	-	12974403	13004135	A5SS	0.11	50	50	ENSMUST00000074352.11	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	12996129	-	12974403	13004135	A5SS	0.11	50	50	ENSMUST00000074352.11	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	12996200	-	12974403	13004135	A5SS	0.11	50	50	ENSMUST00000074352.11	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	13002094	-	12974403	13004135	A5SS	0.11	50	50	ENSMUST00000074352.11	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	13004241	13012780	-	13004241	13015253	A5SS	0.5	50	50	ENSMUST00000074352.11	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	13015334	13022058	-	13015334	13025224	A5SS	0.5	50	50	ENSMUST00000074352.11	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	12988282	-	12974403	12987472	5pMXE	0.11	50	50	ENSMUST00000234118.2	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	12993042	-	12974403	12987472	5pMXE	0.11	50	50	ENSMUST00000234118.2	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	12994181	-	12974403	12987472	5pMXE	0.11	50	50	ENSMUST00000234118.2	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	12996129	-	12974403	12987472	5pMXE	0.11	50	50	ENSMUST00000234118.2	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	12996200	-	12974403	12987472	5pMXE	0.11	50	50	ENSMUST00000234118.2	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	13002094	-	12974403	12987472	5pMXE	0.11	50	50	ENSMUST00000234118.2	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	12993042	-	12974403	12988282	5pMXE	0.11	50	50	ENSMUST00000234194.2	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	12994181	-	12974403	12988282	5pMXE	0.11	50	50	ENSMUST00000234194.2	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	12996129	-	12974403	12988282	5pMXE	0.11	50	50	ENSMUST00000234194.2	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	12996200	-	12974403	12988282	5pMXE	0.11	50	50	ENSMUST00000234194.2	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	13002094	-	12974403	12988282	5pMXE	0.11	50	50	ENSMUST00000234194.2	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	12996129	-	12974403	12994181	5pMXE	0.11	50	50	ENSMUST00000235027.2	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	12996200	-	12974403	12994181	5pMXE	0.11	50	50	ENSMUST00000235027.2	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	13002094	-	12974403	12994181	5pMXE	0.11	50	50	ENSMUST00000235027.2	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	12993042	-	12974403	12994181	A5SS	0.11	50	50	ENSMUST00000235027.2	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12921452	12995164	-	12921452;12952718	12952562;12995164	ES	0.33	50	50	ENSMUST00000118313.8	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12952718	12996200	-	12952718	12995164	5pMXE	0.33	50	50	ENSMUST00000118313.8	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12921452;12974403	12974241;12995164	-	12921452;12952718	12952562;12995164	MXE	0.5	100	100	ENSMUST00000118313.8	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12952718	12996200	-	12952718;12974403	12974241;12996200	ES	0.5	50	50	ENSMUST00000117361.8	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	13002094	-	12974403	12996200	5pMXE	0.11	50	50	ENSMUST00000117361.8	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	12993042	-	12974403	12996200	A5SS	0.11	50	50	ENSMUST00000117361.8	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	12996129	-	12974403	12996200	A5SS	0.11	50	50	ENSMUST00000117361.8	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	13002094	-	12974403	12996129	5pMXE	0.11	50	50	ENSMUST00000234871.2	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	12993042	-	12974403	12996129	A5SS	0.11	50	50	ENSMUST00000234871.2	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12921452	12974241	-	12921452	12952562	5pMXE	0.33	50	50	ENSMUST00000234428.2	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12921452;12974403	12974241;12995164	-	12921452	12995164	cassetteExon	0.5	100	100	ENSMUST00000121774.8	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12974403	13002094	-	12974403	12993042	5pMXE	0.11	50	50	ENSMUST00000124570.3	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	12921452;12974403	12974241;12996200	-	12921452;12952718	12952562;12996200	MXE	0.5	100	100	ENSMUST00000143077.8	ENSMUSG00000044252.19	Osbpl1a	chr18	protein_coding	oxysterol binding protein-like 1A
chr18	13109588;13110724	13110629;13115147	+	13109588	13115147	cassetteExon	0.5	100	100	ENSMUST00000234763.2	ENSMUSG00000024423.7	Impact	chr18	protein_coding	impact, RWD domain protein
chr18	13105429	13107770	+	13088978	13107770	A5SS	0.25	50	50	ENSMUST00000234763.2	ENSMUSG00000024423.7	Impact	chr18	protein_coding	impact, RWD domain protein
chr18	13107532	13107770	+	13088978	13107770	A5SS	0.25	50	50	ENSMUST00000234763.2	ENSMUSG00000024423.7	Impact	chr18	protein_coding	impact, RWD domain protein
chr18	13107592	13107770	+	13088978	13107770	A5SS	0.25	50	50	ENSMUST00000234763.2	ENSMUSG00000024423.7	Impact	chr18	protein_coding	impact, RWD domain protein
chr18	13107532	13107770	+	13105429	13107770	A5SS	0.25	50	50	ENSMUST00000025290.7	ENSMUSG00000024423.7	Impact	chr18	protein_coding	impact, RWD domain protein
chr18	13107592	13107770	+	13105429	13107770	A5SS	0.25	50	50	ENSMUST00000025290.7	ENSMUSG00000024423.7	Impact	chr18	protein_coding	impact, RWD domain protein
chr18	13107592	13107770	+	13107532	13107770	A5SS	0.25	50	50	ENSMUST00000234409.2	ENSMUSG00000024423.7	Impact	chr18	protein_coding	impact, RWD domain protein
chr18	13140299	13154820	+	13140299;13148996	13148833;13154820	ES	0.33	50	50	ENSMUST00000041676.3	ENSMUSG00000037346.6	Hrh4	chr18	protein_coding	histamine receptor H4
chr18	13148996;13154205	13154117;13154820	+	13148996	13154820	cassetteExon	0.5	100	100	ENSMUST00000041676.3	ENSMUSG00000037346.6	Hrh4	chr18	protein_coding	histamine receptor H4
chr18	13154205	13154820	+	13140299	13154820	A5SS	0.33	50	50	ENSMUST00000234084.2	ENSMUSG00000037346.6	Hrh4	chr18	protein_coding	histamine receptor H4
chr18	13980191	14104421	-	13980191;14072198	14072019;14104421	ES	0.5	50	50	ENSMUST00000025288.9	ENSMUSG00000024420.10	Zfp521	chr18	protein_coding	zinc finger protein 521
chr18	14072198	14105558	-	14072198;14104461	14104421;14105558	ES	0.5	50	50	ENSMUST00000025288.9	ENSMUSG00000024420.10	Zfp521	chr18	protein_coding	zinc finger protein 521
chr18	13950376	13976839	-	13950379	13976839	A3SS	0.5	50	50	ENSMUST00000025288.9	ENSMUSG00000024420.10	Zfp521	chr18	protein_coding	zinc finger protein 521
chr18	13980191	14009242	-	13980191	14072019	A5SS	0.33	50	50	ENSMUST00000025288.9	ENSMUSG00000024420.10	Zfp521	chr18	protein_coding	zinc finger protein 521
chr18	14072198	14105558	-	14072198	14104421	5pMXE	0.5	50	50	ENSMUST00000234410.2	ENSMUSG00000024420.10	Zfp521	chr18	protein_coding	zinc finger protein 521
chr18	13980191;14104461	14104421;14105558	-	13980191;14072198	14072019;14105558	MXE	0.5	100	100	ENSMUST00000234237.2	ENSMUSG00000024420.10	Zfp521	chr18	protein_coding	zinc finger protein 521
chr18	13980191	14104421	-	13980191	14009242	5pMXE	0.33	50	50	ENSMUST00000234523.2	ENSMUSG00000024420.10	Zfp521	chr18	protein_coding	zinc finger protein 521
chr18	14446791	14464202	-	14446791;14462162	14462028;14464202	ES	0.5	50	50	ENSMUST00000234225.2	ENSMUSG00000117365.2	Gm29992	chr18	lncRNA	predicted gene, 29992
chr18	14769675	14773314	-	14769675;14770541	14770449;14773314	ES	0.5	50	50	ENSMUST00000040964.13	ENSMUSG00000037013.18	Ss18	chr18	protein_coding	SS18, nBAF chromatin remodeling complex subunit
chr18	14788237	14812444	-	14788237;14803450	14803366;14812444	ES	0.5	50	50	ENSMUST00000040964.13	ENSMUSG00000037013.18	Ss18	chr18	protein_coding	SS18, nBAF chromatin remodeling complex subunit
chr18	14803450	14815724	-	14803450;14812520	14812444;14815724	ES	0.5	50	50	ENSMUST00000040964.13	ENSMUSG00000037013.18	Ss18	chr18	protein_coding	SS18, nBAF chromatin remodeling complex subunit
chr18	14774180;14784301	14784080;14788084	-	14774180	14788084	cassetteExon	0.5	100	100	ENSMUST00000040964.13	ENSMUSG00000037013.18	Ss18	chr18	protein_coding	SS18, nBAF chromatin remodeling complex subunit
chr18	14774180	14788084	-	14774180	14784080	5pMXE	0.5	50	50	ENSMUST00000235011.2	ENSMUSG00000037013.18	Ss18	chr18	protein_coding	SS18, nBAF chromatin remodeling complex subunit
chr18	14773418	14774013	-	14766733	14774013	A3SS	0.5	50	50	ENSMUST00000235011.2	ENSMUSG00000037013.18	Ss18	chr18	protein_coding	SS18, nBAF chromatin remodeling complex subunit
chr18	14766733	14769553	-	14766733	14774013	A5SS	0.5	50	50	ENSMUST00000235011.2	ENSMUSG00000037013.18	Ss18	chr18	protein_coding	SS18, nBAF chromatin remodeling complex subunit
chr18	14788237;14803450	14803366;14815724	-	14788237;14812520	14812444;14815724	MXE	0.5	100	100	ENSMUST00000234224.2	ENSMUSG00000037013.18	Ss18	chr18	protein_coding	SS18, nBAF chromatin remodeling complex subunit
chr18	14788237	14812444	-	14788237	14803366	5pMXE	0.5	50	50	ENSMUST00000234737.2	ENSMUSG00000037013.18	Ss18	chr18	protein_coding	SS18, nBAF chromatin remodeling complex subunit
chr18	14839389	14859561	+	14839389;14854350	14854224;14859561	ES	0.5	50	50	ENSMUST00000040860.3	ENSMUSG00000036743.5	Psma8	chr18	protein_coding	proteasome subunit alpha 8
chr18	14864158	14890679	+	14864158;14890458	14890339;14890679	ES	0.5	50	50	ENSMUST00000040860.3	ENSMUSG00000036743.5	Psma8	chr18	protein_coding	proteasome subunit alpha 8
chr18	14839389;14851240	14851170;14854224	+	14839389	14854224	cassetteExon	0.5	100	100	ENSMUST00000040860.3	ENSMUSG00000036743.5	Psma8	chr18	protein_coding	proteasome subunit alpha 8
chr18	14839664	14854224	+	14839389	14854224	A5SS	0.33	50	50	ENSMUST00000040860.3	ENSMUSG00000036743.5	Psma8	chr18	protein_coding	proteasome subunit alpha 8
chr18	14839664	14854224	+	14851240	14854224	A5SS&ES	0.33	50	50	ENSMUST00000234869.2	ENSMUSG00000036743.5	Psma8	chr18	protein_coding	proteasome subunit alpha 8
chr18	14839389	14851170	+	14839389	14859561	A3SS	0.33	50	50	ENSMUST00000234177.2	ENSMUSG00000036743.5	Psma8	chr18	protein_coding	proteasome subunit alpha 8
chr18	14839389	14859561	+	14854350	14859561	A5SS&ES	0.5	50	50	ENSMUST00000234922.2	ENSMUSG00000036743.5	Psma8	chr18	protein_coding	proteasome subunit alpha 8
chr18	14864158	14890679	+	14864158	14890339	3pMXE	0.5	50	50	ENSMUST00000234318.2	ENSMUSG00000036743.5	Psma8	chr18	protein_coding	proteasome subunit alpha 8
chr18	14954627	14955151	+	14954612	14955151	A5SS	0.5	50	50	ENSMUST00000234789.2	ENSMUSG00000054321.8	Taf4b	chr18	protein_coding	TATA-box binding protein associated factor 4b
chr18	15119537	15121943	-	15119537	15140753	A5SS	0.5	50	50	ENSMUST00000025992.7	ENSMUSG00000036225.16	Kctd1	chr18	protein_coding	potassium channel tetramerisation domain containing 1
chr18	15140931	15148247	-	15140931	15284373	A5SS	0.25	50	50	ENSMUST00000025992.7	ENSMUSG00000036225.16	Kctd1	chr18	protein_coding	potassium channel tetramerisation domain containing 1
chr18	15140931	15194825	-	15140931	15284373	A5SS	0.25	50	50	ENSMUST00000025992.7	ENSMUSG00000036225.16	Kctd1	chr18	protein_coding	potassium channel tetramerisation domain containing 1
chr18	15140931	15196962	-	15140931	15284373	A5SS	0.25	50	50	ENSMUST00000025992.7	ENSMUSG00000036225.16	Kctd1	chr18	protein_coding	potassium channel tetramerisation domain containing 1
chr18	15140931	15196962	-	15140931	15194825	5pMXE	0.25	50	50	ENSMUST00000168989.9	ENSMUSG00000036225.16	Kctd1	chr18	protein_coding	potassium channel tetramerisation domain containing 1
chr18	15140931	15148247	-	15140931	15194825	A5SS	0.25	50	50	ENSMUST00000168989.9	ENSMUSG00000036225.16	Kctd1	chr18	protein_coding	potassium channel tetramerisation domain containing 1
chr18	15140931	15196962	-	15140931	15148247	5pMXE	0.25	50	50	ENSMUST00000234221.2	ENSMUSG00000036225.16	Kctd1	chr18	protein_coding	potassium channel tetramerisation domain containing 1
chr18	15530490	15530636	-	15526786	15530636	A3SS	0.5	50	50	ENSMUST00000238946.2	ENSMUSG00000024411.12	Aqp4	chr18	protein_coding	aquaporin 4
chr18	15533059	15537238	-	15533059	15536657	5pMXE	0.2	50	50	ENSMUST00000079081.8	ENSMUSG00000024411.12	Aqp4	chr18	protein_coding	aquaporin 4
chr18	15533059	15541041	-	15533059	15536657	5pMXE	0.2	50	50	ENSMUST00000079081.8	ENSMUSG00000024411.12	Aqp4	chr18	protein_coding	aquaporin 4
chr18	15533059	15542335	-	15533059	15536657	5pMXE	0.2	50	50	ENSMUST00000079081.8	ENSMUSG00000024411.12	Aqp4	chr18	protein_coding	aquaporin 4
chr18	15533059	15535716	-	15533059	15536657	A5SS	0.2	50	50	ENSMUST00000079081.8	ENSMUSG00000024411.12	Aqp4	chr18	protein_coding	aquaporin 4
chr18	15533059	15542335	-	15533059	15541041	5pMXE	0.2	50	50	ENSMUST00000234466.2	ENSMUSG00000024411.12	Aqp4	chr18	protein_coding	aquaporin 4
chr18	15533059;15537421	15537238;15541041	-	15533059	15541041	cassetteExon	0.5	100	100	ENSMUST00000234466.2	ENSMUSG00000024411.12	Aqp4	chr18	protein_coding	aquaporin 4
chr18	15533059	15535716	-	15533059	15541041	A5SS	0.2	50	50	ENSMUST00000234466.2	ENSMUSG00000024411.12	Aqp4	chr18	protein_coding	aquaporin 4
chr18	15533059;15541145	15541041;15542335	-	15533059	15542335	cassetteExon	0.5	100	100	ENSMUST00000234624.2	ENSMUSG00000024411.12	Aqp4	chr18	protein_coding	aquaporin 4
chr18	15533059	15535716	-	15533059	15542335	A5SS	0.2	50	50	ENSMUST00000234624.2	ENSMUSG00000024411.12	Aqp4	chr18	protein_coding	aquaporin 4
chr18	15533059	15537238	-	15533059	15542335	A5SS	0.2	50	50	ENSMUST00000234624.2	ENSMUSG00000024411.12	Aqp4	chr18	protein_coding	aquaporin 4
chr18	15541145	15543949	-	15541145;15542464	15542335;15543949	ES	0.33	50	50	ENSMUST00000235044.2	ENSMUSG00000024411.12	Aqp4	chr18	protein_coding	aquaporin 4
chr18	15533059	15535716	-	15533059	15537238	A5SS	0.2	50	50	ENSMUST00000235044.2	ENSMUSG00000024411.12	Aqp4	chr18	protein_coding	aquaporin 4
chr18	15533059;15537421	15537238;15543949	-	15533059;15541145	15541041;15543949	MXE	0.5	100	100	ENSMUST00000234518.2	ENSMUSG00000024411.12	Aqp4	chr18	protein_coding	aquaporin 4
chr18	15533059;15542464	15542335;15543949	-	15533059;15541145	15541041;15543949	MXE	0.5	100	100	ENSMUST00000234518.2	ENSMUSG00000024411.12	Aqp4	chr18	protein_coding	aquaporin 4
chr18	15533059;15537421	15537238;15543949	-	15533059;15542464	15541041;15543949	MXE	0.5	100	100	ENSMUST00000234391.2	ENSMUSG00000024411.12	Aqp4	chr18	protein_coding	aquaporin 4
chr18	15533059;15537421	15537238;15543949	-	15533059;15542464	15542335;15543949	MXE	0.5	100	100	ENSMUST00000234473.2	ENSMUSG00000024411.12	Aqp4	chr18	protein_coding	aquaporin 4
chr18	15537421;15541145	15541041;15543949	-	15537421	15543949	cassetteExon	0.5	100	100	ENSMUST00000234053.2	ENSMUSG00000024411.12	Aqp4	chr18	protein_coding	aquaporin 4
chr18	15628384;15631227	15631170;15746739	-	15628384	15746739	cassetteExon	0.5	100	100	ENSMUST00000053017.13	ENSMUSG00000047161.13	Chst9	chr18	protein_coding	carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
chr18	16783555	16803015	-	16783555	16907565	A5SS	0.5	50	50	ENSMUST00000025166.14	ENSMUSG00000024304.15	Cdh2	chr18	protein_coding	cadherin 2
chr18	16950127	16953022	+	16950127;16951387	16951264;16953022	ES	0.33	50	50	ENSMUST00000209584.2	ENSMUSG00000086095.3	Gm15328	chr18	lncRNA	predicted gene 15328
chr18	16951387;16952289	16952227;16953022	+	16951387	16953022	cassetteExon	0.5	100	100	ENSMUST00000209584.2	ENSMUSG00000086095.3	Gm15328	chr18	lncRNA	predicted gene 15328
chr18	16950127	16951199	+	16950127	16951264	A3SS	0.33	50	50	ENSMUST00000209584.2	ENSMUSG00000086095.3	Gm15328	chr18	lncRNA	predicted gene 15328
chr18	16949546	16949923	+	16949546	16949938	A3SS	0.33	50	50	ENSMUST00000210330.2	ENSMUSG00000086095.3	Gm15328	chr18	lncRNA	predicted gene 15328
chr18	16949546	16950053	+	16949546	16949938	A3SS	0.33	50	50	ENSMUST00000210330.2	ENSMUSG00000086095.3	Gm15328	chr18	lncRNA	predicted gene 15328
chr18	16950127	16953022	+	16950127;16951387	16951199;16953022	ES	0.33	50	50	ENSMUST00000210201.2	ENSMUSG00000086095.3	Gm15328	chr18	lncRNA	predicted gene 15328
chr18	16949546	16950053	+	16949546	16949923	A3SS	0.33	50	50	ENSMUST00000211529.2	ENSMUSG00000086095.3	Gm15328	chr18	lncRNA	predicted gene 15328
chr18	16952289	16953022	+	16950127	16953022	A5SS	0.33	50	50	ENSMUST00000211529.2	ENSMUSG00000086095.3	Gm15328	chr18	lncRNA	predicted gene 15328
chr18	17255404;17258897	17258788;17270196	+	17255404	17270196	cassetteExon	0.5	100	100	ENSMUST00000147119.8	ENSMUSG00000087170.8	1700001G01Rik	chr18	lncRNA	RIKEN cDNA 1700001G01 gene
chr18	17152221	17165483	+	17152221	17255310	A3SS	0.5	50	50	ENSMUST00000147119.8	ENSMUSG00000087170.8	1700001G01Rik	chr18	lncRNA	RIKEN cDNA 1700001G01 gene
chr18	17178503	17255310	+	17152221	17255310	A5SS	0.5	50	50	ENSMUST00000147119.8	ENSMUSG00000087170.8	1700001G01Rik	chr18	lncRNA	RIKEN cDNA 1700001G01 gene
chr18	17262764	17270196	+	17255404	17270196	A5SS	0.33	50	50	ENSMUST00000147119.8	ENSMUSG00000087170.8	1700001G01Rik	chr18	lncRNA	RIKEN cDNA 1700001G01 gene
chr18	17168921	17169249	+	17165672	17169249	A5SS	0.5	50	50	ENSMUST00000153022.8	ENSMUSG00000087170.8	1700001G01Rik	chr18	lncRNA	RIKEN cDNA 1700001G01 gene
chr18	17258897	17270196	+	17258897;17262764	17262452;17270196	ES	0.33	50	50	ENSMUST00000125117.2	ENSMUSG00000087170.8	1700001G01Rik	chr18	lncRNA	RIKEN cDNA 1700001G01 gene
chr18	17255404	17270196	+	17258897	17270196	5pMXE	0.33	50	50	ENSMUST00000136956.2	ENSMUSG00000087170.8	1700001G01Rik	chr18	lncRNA	RIKEN cDNA 1700001G01 gene
chr18	20096626	20098685	-	20096626;20096748	20096706;20098685	ES	0.5	50	50	ENSMUST00000115848.5	ENSMUSG00000059898.10	Dsc3	chr18	protein_coding	desmocollin 3
chr18	20165460;20165592	20165547;20166119	-	20165460	20166119	cassetteExon	0.5	100	100	ENSMUST00000075214.9	ENSMUSG00000024331.12	Dsc2	chr18	protein_coding	desmocollin 2
chr18	20181451;20181874	20181840;20183063	-	20181451	20183063	cassetteExon	0.5	100	100	ENSMUST00000075214.9	ENSMUSG00000024331.12	Dsc2	chr18	protein_coding	desmocollin 2
chr18	20218808;20218937	20218892;20219706	-	20218808	20219706	cassetteExon	0.5	100	100	ENSMUST00000224432.2	ENSMUSG00000044322.8	Dsc1	chr18	protein_coding	desmocollin 1
chr18	20988133;20988895	20988878;20993490	-	20988133	20993490	cassetteExon	0.5	100	100	ENSMUST00000225661.3	ENSMUSG00000033382.16	Trappc8	chr18	protein_coding	trafficking protein particle complex 8
chr18	21094857	21107356	+	21077814	21107356	A5SS	0.5	50	50	ENSMUST00000050004.3	ENSMUSG00000033107.7	Rnf125	chr18	protein_coding	ring finger protein 125
chr18	21143849	21153945	+	21143849;21150932	21150876;21153945	ES	0.5	50	50	ENSMUST00000234107.2	ENSMUSG00000024317.16	Rnf138	chr18	protein_coding	ring finger protein 138
chr18	21154056	21159143	+	21154056;21157573	21157466;21159143	ES	0.5	50	50	ENSMUST00000234107.2	ENSMUSG00000024317.16	Rnf138	chr18	protein_coding	ring finger protein 138
chr18	21205493	21208708	+	21203947	21208708	A5SS	0.33	50	50	ENSMUST00000234367.2	ENSMUSG00000024313.9	Mep1b	chr18	protein_coding	meprin 1 beta
chr18	21207997	21208708	+	21203947	21208708	A5SS	0.33	50	50	ENSMUST00000234367.2	ENSMUSG00000024313.9	Mep1b	chr18	protein_coding	meprin 1 beta
chr18	21205493;21207997	21207979;21208708	+	21205493	21208708	cassetteExon	0.5	100	100	ENSMUST00000235102.2	ENSMUSG00000024313.9	Mep1b	chr18	protein_coding	meprin 1 beta
chr18	21786570	21786866	+	21785919	21786866	A5SS	0.5	50	50	ENSMUST00000144487.8	ENSMUSG00000043168.13	4930426D05Rik	chr18	lncRNA	RIKEN cDNA 4930426D05 gene
chr18	22283551	22299511	-	22283551;22287675	22287546;22299511	ES	0.5	50	50	ENSMUST00000234736.2	ENSMUSG00000024306.14	Ccdc178	chr18	protein_coding	coiled coil domain containing 178
chr18	22283551	22287553	-	22283551	22287546	A5SS	0.33	50	50	ENSMUST00000234736.2	ENSMUSG00000024306.14	Ccdc178	chr18	protein_coding	coiled coil domain containing 178
chr18	22299593	22304169	-	22299593	22304429	A5SS	0.5	50	50	ENSMUST00000234736.2	ENSMUSG00000024306.14	Ccdc178	chr18	protein_coding	coiled coil domain containing 178
chr18	22283551;22287675	22287553;22299511	-	22283551	22299511	cassetteExon	0.5	100	100	ENSMUST00000025160.9	ENSMUSG00000024306.14	Ccdc178	chr18	protein_coding	coiled coil domain containing 178
chr18	22508272	22525701	+	22508272	22542978	A3SS	0.5	50	50	ENSMUST00000239326.2	ENSMUSG00000045215.18	Asxl3	chr18	protein_coding	ASXL transcriptional regulator 3
chr18	22478037	22508190	+	22477460	22508190	A5SS	0.33	50	50	ENSMUST00000239326.2	ENSMUSG00000045215.18	Asxl3	chr18	protein_coding	ASXL transcriptional regulator 3
chr18	22478223	22508190	+	22477460	22508190	A5SS	0.33	50	50	ENSMUST00000239326.2	ENSMUSG00000045215.18	Asxl3	chr18	protein_coding	ASXL transcriptional regulator 3
chr18	22540030	22542978	+	22508272	22542978	A5SS	0.5	50	50	ENSMUST00000239326.2	ENSMUSG00000045215.18	Asxl3	chr18	protein_coding	ASXL transcriptional regulator 3
chr18	22478223	22508190	+	22478037	22508190	A5SS	0.33	50	50	ENSMUST00000153836.2	ENSMUSG00000045215.18	Asxl3	chr18	protein_coding	ASXL transcriptional regulator 3
chr18	22525909	22542975	+	22525909	22540028	A3SS&ES	0.5	50	50	ENSMUST00000120223.8	ENSMUSG00000045215.18	Asxl3	chr18	protein_coding	ASXL transcriptional regulator 3
chr18	22956627	23045639	-	22956627	22983695	5pMXE	0.33	50	50	ENSMUST00000092015.11	ENSMUSG00000041923.16	Nol4	chr18	protein_coding	nucleolar protein 4
chr18	22885097;22902992	22902801;22903738	-	22885097	22903738	cassetteExon	0.5	100	100	ENSMUST00000092015.11	ENSMUSG00000041923.16	Nol4	chr18	protein_coding	nucleolar protein 4
chr18	22828191	22852127	-	22828191	22852036	A5SS	0.5	50	50	ENSMUST00000092015.11	ENSMUSG00000041923.16	Nol4	chr18	protein_coding	nucleolar protein 4
chr18	22956627	22961343	-	22956627	22983695	A5SS	0.33	50	50	ENSMUST00000092015.11	ENSMUSG00000041923.16	Nol4	chr18	protein_coding	nucleolar protein 4
chr18	23085367	23171924	-	23085367	23171615	5pMXE	0.33	50	50	ENSMUST00000081423.13	ENSMUSG00000041923.16	Nol4	chr18	protein_coding	nucleolar protein 4
chr18	23085367	23172836	-	23085367	23171615	5pMXE	0.33	50	50	ENSMUST00000081423.13	ENSMUSG00000041923.16	Nol4	chr18	protein_coding	nucleolar protein 4
chr18	23055014;23084262	23084222;23085218	-	23055014	23085218	cassetteExon	0.5	100	100	ENSMUST00000081423.13	ENSMUSG00000041923.16	Nol4	chr18	protein_coding	nucleolar protein 4
chr18	22956627	22961343	-	22956627	23045639	A5SS	0.33	50	50	ENSMUST00000081423.13	ENSMUSG00000041923.16	Nol4	chr18	protein_coding	nucleolar protein 4
chr18	23085367	23171924	-	23085367	23172836	A5SS	0.33	50	50	ENSMUST00000097651.10	ENSMUSG00000041923.16	Nol4	chr18	protein_coding	nucleolar protein 4
chr18	23608299;23630760	23630539;23668219	+	23608299	23668219	cassetteExon	0.5	100	100	ENSMUST00000222515.2	ENSMUSG00000024302.17	Dtna	chr18	protein_coding	dystrobrevin alpha
chr18	23668286;23676469	23676188;23678743	+	23668286	23678743	cassetteExon	0.5	100	100	ENSMUST00000222515.2	ENSMUSG00000024302.17	Dtna	chr18	protein_coding	dystrobrevin alpha
chr18	23548682	23608173	+	23548315	23608173	A5SS	0.5	50	50	ENSMUST00000222515.2	ENSMUSG00000024302.17	Dtna	chr18	protein_coding	dystrobrevin alpha
chr18	23764485;23766295	23766275;23776204	+	23764485	23776204	cassetteExon	0.5	100	100	ENSMUST00000115832.4	ENSMUSG00000024302.17	Dtna	chr18	protein_coding	dystrobrevin alpha
chr18	23678823	23682170	+	23678823	23702619	A3SS	0.5	50	50	ENSMUST00000115832.4	ENSMUSG00000024302.17	Dtna	chr18	protein_coding	dystrobrevin alpha
chr18	23735731	23737022	+	23735731	23754444	A3SS	0.33	50	50	ENSMUST00000115832.4	ENSMUSG00000024302.17	Dtna	chr18	protein_coding	dystrobrevin alpha
chr18	23735731	23743521	+	23735731	23754444	A3SS	0.33	50	50	ENSMUST00000115832.4	ENSMUSG00000024302.17	Dtna	chr18	protein_coding	dystrobrevin alpha
chr18	23784705	23791662	+	23784705	23786386	A3SS&ES	0.5	50	50	ENSMUST00000115832.4	ENSMUSG00000024302.17	Dtna	chr18	protein_coding	dystrobrevin alpha
chr18	23786434	23791662	+	23786434	23788870	A3SS	0.5	50	50	ENSMUST00000115832.4	ENSMUSG00000024302.17	Dtna	chr18	protein_coding	dystrobrevin alpha
chr18	23744213	23754444	+	23735731	23754444	A5SS	0.5	50	50	ENSMUST00000115832.4	ENSMUSG00000024302.17	Dtna	chr18	protein_coding	dystrobrevin alpha
chr18	23764485	23776204	+	23764485	23766275	3pMXE	0.5	50	50	ENSMUST00000221880.2	ENSMUSG00000024302.17	Dtna	chr18	protein_coding	dystrobrevin alpha
chr18	23735731	23737022	+	23735731	23743521	A3SS	0.33	50	50	ENSMUST00000221880.2	ENSMUSG00000024302.17	Dtna	chr18	protein_coding	dystrobrevin alpha
chr18	23784705	23791662	+	23784705;23786434	23786386;23791662	ES	0.5	50	50	ENSMUST00000220904.2	ENSMUSG00000024302.17	Dtna	chr18	protein_coding	dystrobrevin alpha
chr18	23886926	23905661	+	23885477	23905661	A5SS	0.5	50	50	ENSMUST00000132286.8	ENSMUSG00000024277.15	Mapre2	chr18	protein_coding	microtubule-associated protein, RP/EB family, member 2
chr18	23905716	23930490	+	23905716	23965910	A3SS	0.5	50	50	ENSMUST00000170802.8	ENSMUSG00000024277.15	Mapre2	chr18	protein_coding	microtubule-associated protein, RP/EB family, member 2
chr18	23937278	23965910	+	23905716	23965910	A5SS	0.5	50	50	ENSMUST00000170802.8	ENSMUSG00000024277.15	Mapre2	chr18	protein_coding	microtubule-associated protein, RP/EB family, member 2
chr18	23937278	23986711	+	23966037	23986711	A5SS&ES	0.5	50	50	ENSMUST00000170802.8	ENSMUSG00000024277.15	Mapre2	chr18	protein_coding	microtubule-associated protein, RP/EB family, member 2
chr18	23937278	23986711	+	23937278;23966037	23965910;23986711	ES	0.5	50	50	ENSMUST00000025127.5	ENSMUSG00000024277.15	Mapre2	chr18	protein_coding	microtubule-associated protein, RP/EB family, member 2
chr18	23937278	23986711	+	23937278	23965910	3pMXE	0.5	50	50	ENSMUST00000141853.2	ENSMUSG00000024277.15	Mapre2	chr18	protein_coding	microtubule-associated protein, RP/EB family, member 2
chr18	24087918	24089396	+	24088080	24089396	A5SS	0.33	50	50	ENSMUST00000225682.2	ENSMUSG00000024276.8	Zfp397	chr18	protein_coding	zinc finger protein 397
chr18	24088240	24089396	+	24088080	24089396	A5SS	0.33	50	50	ENSMUST00000225682.2	ENSMUSG00000024276.8	Zfp397	chr18	protein_coding	zinc finger protein 397
chr18	24088240	24089396	+	24087918	24089396	A5SS	0.33	50	50	ENSMUST00000060762.6	ENSMUSG00000024276.8	Zfp397	chr18	protein_coding	zinc finger protein 397
chr18	24104209	24104439	-	24104158	24104439	A3SS	0.5	50	50	ENSMUST00000115829.4	ENSMUSG00000024274.11	Zscan30	chr18	transcribed_unprocessed_pseudogene	zinc finger and SCAN domain containing 30
chr18	24151225	24152889	-	24151225	24153769	A5SS	0.33	50	50	ENSMUST00000066497.12	ENSMUSG00000051469.15	Zfp24	chr18	protein_coding	zinc finger protein 24
chr18	24151225	24153275	-	24151225	24153769	A5SS	0.33	50	50	ENSMUST00000066497.12	ENSMUSG00000051469.15	Zfp24	chr18	protein_coding	zinc finger protein 24
chr18	24151225	24152889	-	24151225	24153275	A5SS	0.33	50	50	ENSMUST00000153337.2	ENSMUSG00000051469.15	Zfp24	chr18	protein_coding	zinc finger protein 24
chr18	24239715;24241939	24241794;24244772	-	24239715	24244772	cassetteExon	0.5	100	100	ENSMUST00000153360.8	ENSMUSG00000047989.12	Ino80c	chr18	protein_coding	INO80 complex subunit C
chr18	24247244	24247787	-	24247244	24254706	A5SS	0.5	50	50	ENSMUST00000153360.8	ENSMUSG00000047989.12	Ino80c	chr18	protein_coding	INO80 complex subunit C
chr18	24247244	24254706	-	24239715	24254706	A3SS	0.5	50	50	ENSMUST00000141489.2	ENSMUSG00000047989.12	Ino80c	chr18	protein_coding	INO80 complex subunit C
chr18	24239715	24241794	-	24239715	24254706	A5SS	0.33	50	50	ENSMUST00000141489.2	ENSMUSG00000047989.12	Ino80c	chr18	protein_coding	INO80 complex subunit C
chr18	24239715	24244772	-	24239715	24254706	A5SS	0.33	50	50	ENSMUST00000141489.2	ENSMUSG00000047989.12	Ino80c	chr18	protein_coding	INO80 complex subunit C
chr18	24371542	24387575	+	24371542;24379281	24379107;24387575	ES	0.5	50	50	ENSMUST00000000430.14	ENSMUSG00000000420.16	Galnt1	chr18	protein_coding	polypeptide N-acetylgalactosaminyltransferase 1
chr18	24379281	24397382	+	24379281;24387741	24387575;24397382	ES	0.5	50	50	ENSMUST00000000430.14	ENSMUSG00000000420.16	Galnt1	chr18	protein_coding	polypeptide N-acetylgalactosaminyltransferase 1
chr18	24415293	24415596	+	24415293	24417767	A3SS	0.5	50	50	ENSMUST00000000430.14	ENSMUSG00000000420.16	Galnt1	chr18	protein_coding	polypeptide N-acetylgalactosaminyltransferase 1
chr18	24339137	24365656	+	24338575	24365656	A5SS	0.33	50	50	ENSMUST00000000430.14	ENSMUSG00000000420.16	Galnt1	chr18	protein_coding	polypeptide N-acetylgalactosaminyltransferase 1
chr18	24339408	24365656	+	24338575	24365656	A5SS	0.33	50	50	ENSMUST00000000430.14	ENSMUSG00000000420.16	Galnt1	chr18	protein_coding	polypeptide N-acetylgalactosaminyltransferase 1
chr18	24339408	24365656	+	24339137	24365656	A5SS	0.33	50	50	ENSMUST00000170243.8	ENSMUSG00000000420.16	Galnt1	chr18	protein_coding	polypeptide N-acetylgalactosaminyltransferase 1
chr18	24379281	24397382	+	24379281	24387575	3pMXE	0.5	50	50	ENSMUST00000164998.8	ENSMUSG00000000420.16	Galnt1	chr18	protein_coding	polypeptide N-acetylgalactosaminyltransferase 1
chr18	24371542;24379281	24379107;24397382	+	24371542;24387741	24387575;24397382	MXE	0.5	100	100	ENSMUST00000171583.2	ENSMUSG00000000420.16	Galnt1	chr18	protein_coding	polypeptide N-acetylgalactosaminyltransferase 1
chr18	24604141	24606007	+	24604203	24606007	A5SS	0.5	50	50	ENSMUST00000235029.2	ENSMUSG00000024273.9	2700062C07Rik	chr18	protein_coding	RIKEN cDNA 2700062C07 gene
chr18	24604037	24608582	+	24606206	24608582	A5SS&ES	0.5	50	50	ENSMUST00000234559.2	ENSMUSG00000024273.9	2700062C07Rik	chr18	protein_coding	RIKEN cDNA 2700062C07 gene
chr18	24604037	24604119	+	24604037	24608582	A3SS	0.5	50	50	ENSMUST00000234303.2	ENSMUSG00000024273.9	2700062C07Rik	chr18	protein_coding	RIKEN cDNA 2700062C07 gene
chr18	24732470	24736344	-	24732470;24734696	24733872;24736344	ES	0.5	50	50	ENSMUST00000070726.10	ENSMUSG00000024270.12	Slc39a6	chr18	protein_coding	solute carrier family 39 (metal ion transporter), member 6
chr18	24734696	24736169	-	24734696	24736344	A5SS	0.5	50	50	ENSMUST00000070726.10	ENSMUSG00000024270.12	Slc39a6	chr18	protein_coding	solute carrier family 39 (metal ion transporter), member 6
chr18	24734696	24736344	-	24732470	24736344	A3SS	0.5	50	50	ENSMUST00000154205.2	ENSMUSG00000024270.12	Slc39a6	chr18	protein_coding	solute carrier family 39 (metal ion transporter), member 6
chr18	24732470	24733872	-	24732470	24736344	A5SS	0.5	50	50	ENSMUST00000154205.2	ENSMUSG00000024270.12	Slc39a6	chr18	protein_coding	solute carrier family 39 (metal ion transporter), member 6
chr18	24739992;24742757	24742687;24744970	+	24739992	24744970	cassetteExon	0.5	100	100	ENSMUST00000234903.2	ENSMUSG00000024271.9	Elp2	chr18	protein_coding	elongator acetyltransferase complex subunit 2
chr18	24737189	24739914	+	24736037	24739914	A5SS	0.5	50	50	ENSMUST00000234903.2	ENSMUSG00000024271.9	Elp2	chr18	protein_coding	elongator acetyltransferase complex subunit 2
chr18	24745582	24747473	+	24745582	24750458	A3SS	0.5	50	50	ENSMUST00000025120.8	ENSMUSG00000024271.9	Elp2	chr18	protein_coding	elongator acetyltransferase complex subunit 2
chr18	24749083	24750458	+	24745582	24750458	A5SS	0.5	50	50	ENSMUST00000025120.8	ENSMUSG00000024271.9	Elp2	chr18	protein_coding	elongator acetyltransferase complex subunit 2
chr18	24822119	24822644	+	24822119	24825575	A3SS	0.5	50	50	ENSMUST00000068006.9	ENSMUSG00000039616.11	Mocos	chr18	protein_coding	molybdenum cofactor sulfurase
chr18	25135089	25155679	+	25135089;25153814	25153719;25155679	ES	0.5	50	50	ENSMUST00000037097.9	ENSMUSG00000034295.11	Fhod3	chr18	protein_coding	formin homology 2 domain containing 3
chr18	25257448	25258800	+	25253368	25258800	A5SS	0.5	50	50	ENSMUST00000037097.9	ENSMUSG00000034295.11	Fhod3	chr18	protein_coding	formin homology 2 domain containing 3
chr18	25135089	25161122	+	25135089;25156035	25155679;25161122	ES	0.5	50	50	ENSMUST00000234526.2	ENSMUSG00000034295.11	Fhod3	chr18	protein_coding	formin homology 2 domain containing 3
chr18	25135089	25153719	+	25135089	25161122	A3SS	0.33	50	50	ENSMUST00000234834.2	ENSMUSG00000034295.11	Fhod3	chr18	protein_coding	formin homology 2 domain containing 3
chr18	25272196	25273503	-	25262960	25273503	A3SS	0.5	50	50	ENSMUST00000148255.8	ENSMUSG00000024269.12	Tpgs2	chr18	protein_coding	tubulin polyglutamylase complex subunit 2
chr18	25308542;25315206	25315112;25336918	+	25308542	25336918	cassetteExon	0.5	100	100	ENSMUST00000159605.8	ENSMUSG00000033632.17	AW554918	chr18	protein_coding	expressed sequence AW554918
chr18	25473441;25478019	25477921;25532983	+	25473441	25532983	cassetteExon	0.5	100	100	ENSMUST00000159605.8	ENSMUSG00000033632.17	AW554918	chr18	protein_coding	expressed sequence AW554918
chr18	25337033	25347570	+	25337033	25422996	A3SS	0.5	50	50	ENSMUST00000159605.8	ENSMUSG00000033632.17	AW554918	chr18	protein_coding	expressed sequence AW554918
chr18	25315206	25321617	+	25315206	25336918	A3SS	0.5	50	50	ENSMUST00000036619.14	ENSMUSG00000033632.17	AW554918	chr18	protein_coding	expressed sequence AW554918
chr18	25367088	25423004	+	25347577	25423004	A5SS	0.5	50	50	ENSMUST00000165400.8	ENSMUSG00000033632.17	AW554918	chr18	protein_coding	expressed sequence AW554918
chr18	25620022	25629279	-	25620022;25624281	25624138;25629279	ES	0.5	50	50	ENSMUST00000115816.3	ENSMUSG00000024268.17	Celf4	chr18	protein_coding	CUGBP, Elav-like family member 4
chr18	25612768;25614911	25614827;25619851	-	25612768	25619851	cassetteExon	0.5	100	100	ENSMUST00000115816.3	ENSMUSG00000024268.17	Celf4	chr18	protein_coding	CUGBP, Elav-like family member 4
chr18	25629362	25630522	-	25629359	25630522	A3SS	0.5	50	50	ENSMUST00000115816.3	ENSMUSG00000024268.17	Celf4	chr18	protein_coding	CUGBP, Elav-like family member 4
chr18	25636134	25637196	-	25636137	25637196	A3SS	0.5	50	50	ENSMUST00000115816.3	ENSMUSG00000024268.17	Celf4	chr18	protein_coding	CUGBP, Elav-like family member 4
chr18	25638075	25670734	-	25638072	25670734	A3SS	0.5	50	50	ENSMUST00000115816.3	ENSMUSG00000024268.17	Celf4	chr18	protein_coding	CUGBP, Elav-like family member 4
chr18	25620022	25624198	-	25620022	25624138	A5SS	0.33	50	50	ENSMUST00000115816.3	ENSMUSG00000024268.17	Celf4	chr18	protein_coding	CUGBP, Elav-like family member 4
chr18	25638072	25670764	-	25638072	25670734	A5SS	0.5	50	50	ENSMUST00000115816.3	ENSMUSG00000024268.17	Celf4	chr18	protein_coding	CUGBP, Elav-like family member 4
chr18	25812552	25885633	-	25812552	25886399	A5SS	0.5	50	50	ENSMUST00000115816.3	ENSMUSG00000024268.17	Celf4	chr18	protein_coding	CUGBP, Elav-like family member 4
chr18	25620022	25629279	-	25620022;25624281	25624198;25629279	ES	0.5	50	50	ENSMUST00000223704.2	ENSMUSG00000024268.17	Celf4	chr18	protein_coding	CUGBP, Elav-like family member 4
chr18	25620375	25624198	-	25620022	25624198	A3SS	0.5	50	50	ENSMUST00000223704.2	ENSMUSG00000024268.17	Celf4	chr18	protein_coding	CUGBP, Elav-like family member 4
chr18	26145380	26155559	+	26140764	26155559	A5SS	0.5	50	50	ENSMUST00000234860.2	ENSMUSG00000117604.2	Gm33228	chr18	lncRNA	predicted gene, 33228
chr18	26155773	26197001	+	26155773	26253694	A3SS	0.5	50	50	ENSMUST00000234272.2	ENSMUSG00000117604.2	Gm33228	chr18	lncRNA	predicted gene, 33228
chr18	27831071;27832238	27831996;27839569	-	27831071	27839569	cassetteExon	0.5	100	100	ENSMUST00000234689.2	ENSMUSG00000117529.2	Gm49978	chr18	lncRNA	predicted gene, 49978
chr18	29057177	29070975	+	28996044	29070975	A5SS	0.5	50	50	ENSMUST00000234127.2	ENSMUSG00000117473.2	Gm33948	chr18	lncRNA	predicted gene, 33948
chr18	29005318	29016012	+	29005318;29013186	29013029;29016012	ES	0.5	50	50	ENSMUST00000234407.2	ENSMUSG00000117473.2	Gm33948	chr18	lncRNA	predicted gene, 33948
chr18	29016131	29018225	+	29016131	29018222	A3SS	0.5	50	50	ENSMUST00000234407.2	ENSMUSG00000117473.2	Gm33948	chr18	lncRNA	predicted gene, 33948
chr18	29021183	29029648	+	29021183	29057104	A3SS	0.5	50	50	ENSMUST00000234407.2	ENSMUSG00000117473.2	Gm33948	chr18	lncRNA	predicted gene, 33948
chr18	29580936	29584779	-	29581143	29584779	A3SS&ES	0.5	50	50	ENSMUST00000234588.2	ENSMUSG00000117618.2	4930578E11Rik	chr18	lncRNA	RIKEN cDNA 4930578E11 gene
chr18	29584985	29629347	-	29584985	29604894	A5SS&ES	0.5	50	50	ENSMUST00000234588.2	ENSMUSG00000117618.2	4930578E11Rik	chr18	lncRNA	RIKEN cDNA 4930578E11 gene
chr18	30438095	30444200	+	30438095	30444273	A3SS	0.5	50	50	ENSMUST00000115812.10	ENSMUSG00000033628.16	Pik3c3	chr18	protein_coding	phosphatidylinositol 3-kinase catalytic subunit type 3
chr18	30457671	30463282	+	30457671	30466214	A3SS	0.5	50	50	ENSMUST00000115812.10	ENSMUSG00000033628.16	Pik3c3	chr18	protein_coding	phosphatidylinositol 3-kinase catalytic subunit type 3
chr18	30469237	30475774	+	30469237	30477004	A3SS	0.5	50	50	ENSMUST00000115812.10	ENSMUSG00000033628.16	Pik3c3	chr18	protein_coding	phosphatidylinositol 3-kinase catalytic subunit type 3
chr18	31286949;31345784	31345711;31376174	-	31286949	31376174	cassetteExon	0.5	100	100	ENSMUST00000082070.13	ENSMUSG00000057455.13	Rit2	chr18	protein_coding	Ras-like without CAAX 2
chr18	31340390	31345711	-	31286949	31345711	A3SS	0.5	50	50	ENSMUST00000153060.8	ENSMUSG00000057455.13	Rit2	chr18	protein_coding	Ras-like without CAAX 2
chr18	31286949	31376174	-	31286949	31345711	5pMXE	0.5	50	50	ENSMUST00000153196.2	ENSMUSG00000057455.13	Rit2	chr18	protein_coding	Ras-like without CAAX 2
chr18	31716822	31727630	-	31691673	31727630	A3SS	0.5	50	50	ENSMUST00000233997.2	ENSMUSG00000024259.10	Slc25a46	chr18	protein_coding	solute carrier family 25, member 46
chr18	31768184	31769035	+	31767542	31769035	A5SS	0.33	50	50	ENSMUST00000234760.2	ENSMUSG00000024260.15	Sap130	chr18	protein_coding	Sin3A associated protein
chr18	31768606	31769035	+	31767542	31769035	A5SS	0.33	50	50	ENSMUST00000234760.2	ENSMUSG00000024260.15	Sap130	chr18	protein_coding	Sin3A associated protein
chr18	31786679	31799416	+	31786679	31799394	A3SS	0.5	50	50	ENSMUST00000235017.2	ENSMUSG00000024260.15	Sap130	chr18	protein_coding	Sin3A associated protein
chr18	31813724	31815063	+	31813724	31815060	A3SS	0.5	50	50	ENSMUST00000235017.2	ENSMUSG00000024260.15	Sap130	chr18	protein_coding	Sin3A associated protein
chr18	31783672	31786555	+	31783668	31786555	A5SS	0.5	50	50	ENSMUST00000235017.2	ENSMUSG00000024260.15	Sap130	chr18	protein_coding	Sin3A associated protein
chr18	31768606	31769035	+	31768184	31769035	A5SS	0.33	50	50	ENSMUST00000234846.2	ENSMUSG00000024260.15	Sap130	chr18	protein_coding	Sin3A associated protein
chr18	31894240	31894833	+	31893247	31894833	A5SS	0.5	50	50	ENSMUST00000234500.2	ENSMUSG00000041915.10	Ammecr1l	chr18	protein_coding	AMME chromosomal region gene 1-like
chr18	31912006;31913222	31913095;31913697	+	31912006	31913697	cassetteExon	0.5	100	100	ENSMUST00000115808.4	ENSMUSG00000041915.10	Ammecr1l	chr18	protein_coding	AMME chromosomal region gene 1-like
chr18	31925073	31929103	+	31925073;31928436	31928341;31929103	ES	0.5	50	50	ENSMUST00000025106.5	ENSMUSG00000024258.5	Polr2d	chr18	protein_coding	polymerase (RNA) II (DNA directed) polypeptide D
chr18	31968534	32011077	+	31968534	31974493	3pMXE	0.33	50	50	ENSMUST00000082319.15	ENSMUSG00000024400.17	Wdr33	chr18	protein_coding	WD repeat domain 33
chr18	31968534	31974489	+	31968534	31974493	A3SS	0.33	50	50	ENSMUST00000082319.15	ENSMUSG00000024400.17	Wdr33	chr18	protein_coding	WD repeat domain 33
chr18	31968534	32011077	+	31968534	31974489	3pMXE	0.33	50	50	ENSMUST00000234957.2	ENSMUSG00000024400.17	Wdr33	chr18	protein_coding	WD repeat domain 33
chr18	32064603	32074793	+	32055529	32074793	A5SS	0.2	50	50	ENSMUST00000233994.2	ENSMUSG00000024395.10	Lims2	chr18	protein_coding	LIM and senescent cell antigen like domains 2
chr18	32068610	32074793	+	32055529	32074793	A5SS	0.2	50	50	ENSMUST00000233994.2	ENSMUSG00000024395.10	Lims2	chr18	protein_coding	LIM and senescent cell antigen like domains 2
chr18	32070578	32074793	+	32055529	32074793	A5SS	0.2	50	50	ENSMUST00000233994.2	ENSMUSG00000024395.10	Lims2	chr18	protein_coding	LIM and senescent cell antigen like domains 2
chr18	32072564	32074793	+	32055529	32074793	A5SS	0.2	50	50	ENSMUST00000233994.2	ENSMUSG00000024395.10	Lims2	chr18	protein_coding	LIM and senescent cell antigen like domains 2
chr18	32087187	32087489	+	32077609	32087489	A5SS	0.33	50	50	ENSMUST00000233994.2	ENSMUSG00000024395.10	Lims2	chr18	protein_coding	LIM and senescent cell antigen like domains 2
chr18	32055529	32074793	+	32055529	32087489	A3SS	0.5	50	50	ENSMUST00000234549.2	ENSMUSG00000024395.10	Lims2	chr18	protein_coding	LIM and senescent cell antigen like domains 2
chr18	32077609	32087489	+	32055529	32087489	A5SS	0.33	50	50	ENSMUST00000234549.2	ENSMUSG00000024395.10	Lims2	chr18	protein_coding	LIM and senescent cell antigen like domains 2
chr18	32087187	32087489	+	32055529	32087489	A5SS	0.33	50	50	ENSMUST00000234549.2	ENSMUSG00000024395.10	Lims2	chr18	protein_coding	LIM and senescent cell antigen like domains 2
chr18	32088135	32088311	+	32087638	32088311	A5SS	0.5	50	50	ENSMUST00000234549.2	ENSMUSG00000024395.10	Lims2	chr18	protein_coding	LIM and senescent cell antigen like domains 2
chr18	32064603	32074690	+	32064603	32074793	A3SS	0.5	50	50	ENSMUST00000025254.9	ENSMUSG00000024395.10	Lims2	chr18	protein_coding	LIM and senescent cell antigen like domains 2
chr18	32090366	32091265	+	32090366	32090896	A3SS	0.5	50	50	ENSMUST00000025254.9	ENSMUSG00000024395.10	Lims2	chr18	protein_coding	LIM and senescent cell antigen like domains 2
chr18	32068610	32074793	+	32064603	32074793	A5SS	0.2	50	50	ENSMUST00000025254.9	ENSMUSG00000024395.10	Lims2	chr18	protein_coding	LIM and senescent cell antigen like domains 2
chr18	32070578	32074793	+	32064603	32074793	A5SS	0.2	50	50	ENSMUST00000025254.9	ENSMUSG00000024395.10	Lims2	chr18	protein_coding	LIM and senescent cell antigen like domains 2
chr18	32072564	32074793	+	32064603	32074793	A5SS	0.2	50	50	ENSMUST00000025254.9	ENSMUSG00000024395.10	Lims2	chr18	protein_coding	LIM and senescent cell antigen like domains 2
chr18	32088267	32089311	+	32088461	32089311	A5SS&ES	0.5	50	50	ENSMUST00000025254.9	ENSMUSG00000024395.10	Lims2	chr18	protein_coding	LIM and senescent cell antigen like domains 2
chr18	32070578	32074793	+	32068610	32074793	A5SS	0.2	50	50	ENSMUST00000225470.2	ENSMUSG00000024395.10	Lims2	chr18	protein_coding	LIM and senescent cell antigen like domains 2
chr18	32072564	32074793	+	32068610	32074793	A5SS	0.2	50	50	ENSMUST00000225470.2	ENSMUSG00000024395.10	Lims2	chr18	protein_coding	LIM and senescent cell antigen like domains 2
chr18	32072564	32074793	+	32070578	32074793	A5SS	0.2	50	50	ENSMUST00000234678.2	ENSMUSG00000024395.10	Lims2	chr18	protein_coding	LIM and senescent cell antigen like domains 2
chr18	32114166;32114399	32114322;32116276	-	32114166	32116276	cassetteExon	0.5	100	100	ENSMUST00000134663.2	ENSMUSG00000024388.12	Myo7b	chr18	protein_coding	myosin VIIB
chr18	32217289	32219326	+	32217289;32217803	32217706;32219326	ES	0.5	50	50	ENSMUST00000025243.5	ENSMUSG00000024384.5	Iws1	chr18	protein_coding	IWS1, SUPT6 interacting protein
chr18	32226282;32226750	32226592;32230203	+	32226282	32230203	cassetteExon	0.5	100	100	ENSMUST00000025243.5	ENSMUSG00000024384.5	Iws1	chr18	protein_coding	IWS1, SUPT6 interacting protein
chr18	32217289	32219326	+	32217289	32217706	3pMXE	0.5	50	50	ENSMUST00000212280.2	ENSMUSG00000024384.5	Iws1	chr18	protein_coding	IWS1, SUPT6 interacting protein
chr18	32246025	32252615	-	32246025	32251813	5pMXE	0.5	50	50	ENSMUST00000234704.2	ENSMUSG00000117650.2	4933435E02Rik	chr18	lncRNA	RIKEN cDNA 4933435E02 gene
chr18	32268031	32268914	-	32268066	32268914	A3SS	0.5	50	50	ENSMUST00000234651.2	ENSMUSG00000024386.10	Proc	chr18	protein_coding	protein C
chr18	32270663	32271182	-	32269000	32271182	A3SS	0.33	50	50	ENSMUST00000234651.2	ENSMUSG00000024386.10	Proc	chr18	protein_coding	protein C
chr18	32271000	32271182	-	32269000	32271182	A3SS	0.33	50	50	ENSMUST00000234651.2	ENSMUSG00000024386.10	Proc	chr18	protein_coding	protein C
chr18	32268066	32268535	-	32268066	32268914	A5SS	0.5	50	50	ENSMUST00000234651.2	ENSMUSG00000024386.10	Proc	chr18	protein_coding	protein C
chr18	32269000	32271001	-	32269000	32271182	A5SS	0.5	50	50	ENSMUST00000234651.2	ENSMUSG00000024386.10	Proc	chr18	protein_coding	protein C
chr18	32269004	32270600	-	32269004	32272563	A5SS	0.5	50	50	ENSMUST00000171765.2	ENSMUSG00000024386.10	Proc	chr18	protein_coding	protein C
chr18	32270663;32271000	32270830;32271182	-	32270663	32271182	cassetteExon	0.5	100	100	ENSMUST00000234386.2	ENSMUSG00000024386.10	Proc	chr18	protein_coding	protein C
chr18	32390445	32397601	+	32390445;32394451	32394355;32397601	ES	0.5	50	50	ENSMUST00000025241.7	ENSMUSG00000024382.14	Ercc3	chr18	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 3
chr18	32398789	32402811	+	32398789;32400369	32400217;32402811	ES	0.5	50	50	ENSMUST00000025241.7	ENSMUSG00000024382.14	Ercc3	chr18	protein_coding	excision repair cross-complementing rodent repair deficiency, complementation group 3
chr18	32504636	32510288	-	32504636	32510009	5pMXE	0.33	50	50	ENSMUST00000234930.2	ENSMUSG00000097413.3	A830052D11Rik	chr18	lncRNA	RIKEN cDNA A830052D11 gene
chr18	32504636	32510741	-	32504636	32510009	5pMXE	0.33	50	50	ENSMUST00000234930.2	ENSMUSG00000097413.3	A830052D11Rik	chr18	lncRNA	RIKEN cDNA A830052D11 gene
chr18	32504636	32510288	-	32504636	32510741	A5SS	0.33	50	50	ENSMUST00000181729.3	ENSMUSG00000097413.3	A830052D11Rik	chr18	lncRNA	RIKEN cDNA A830052D11 gene
chr18	32558020	32565036	+	32558020;32564795	32564724;32565036	ES	0.5	50	50	ENSMUST00000234857.2	ENSMUSG00000024381.17	Bin1	chr18	protein_coding	bridging integrator 1
chr18	32547343;32548090	32547998;32552896	+	32547343	32552896	cassetteExon	0.5	100	100	ENSMUST00000234857.2	ENSMUSG00000024381.17	Bin1	chr18	protein_coding	bridging integrator 1
chr18	32558020;32559405	32559277;32564724	+	32558020	32564724	cassetteExon	0.5	100	100	ENSMUST00000234857.2	ENSMUSG00000024381.17	Bin1	chr18	protein_coding	bridging integrator 1
chr18	32540806	32545474	+	32539233	32545474	A5SS	0.5	50	50	ENSMUST00000234857.2	ENSMUSG00000024381.17	Bin1	chr18	protein_coding	bridging integrator 1
chr18	32563910	32564724	+	32558020	32564724	A5SS	0.33	50	50	ENSMUST00000234857.2	ENSMUSG00000024381.17	Bin1	chr18	protein_coding	bridging integrator 1
chr18	32558020	32559277	+	32558020	32565036	A3SS	0.33	50	50	ENSMUST00000234496.2	ENSMUSG00000024381.17	Bin1	chr18	protein_coding	bridging integrator 1
chr18	32559405	32562249	+	32559405	32564724	A3SS	0.5	50	50	ENSMUST00000091967.13	ENSMUSG00000024381.17	Bin1	chr18	protein_coding	bridging integrator 1
chr18	32563910	32564724	+	32559405	32564724	A5SS	0.33	50	50	ENSMUST00000091967.13	ENSMUSG00000024381.17	Bin1	chr18	protein_coding	bridging integrator 1
chr18	32593772	32593993	-	32593768	32593993	A3SS	0.5	50	50	ENSMUST00000207669.2	ENSMUSG00000109238.3	Gm35060	chr18	protein_coding	predicted gene, 35060
chr18	32594082	32595163	-	32594082	32605497	A5SS	0.5	50	50	ENSMUST00000207671.2	ENSMUSG00000109238.3	Gm35060	chr18	protein_coding	predicted gene, 35060
chr18	32663254	32692839	-	32663254;32665837	32665787;32692839	ES	0.5	50	50	ENSMUST00000174459.2	ENSMUSG00000090523.3	Gypc	chr18	protein_coding	glycophorin C
chr18	32665837	32668321	-	32665837	32692839	A5SS	0.5	50	50	ENSMUST00000174459.2	ENSMUSG00000090523.3	Gypc	chr18	protein_coding	glycophorin C
chr18	33068056;33070110	33070019;33071639	+	33068056;33070427	33070338;33071639	MXE	0.5	100	100	ENSMUST00000234205.2	ENSMUSG00000038128.8	Camk4	chr18	protein_coding	calcium/calmodulin-dependent protein kinase IV
chr18	33336868	33339173	-	33336868;33338218	33338104;33339173	ES	0.33	50	50	ENSMUST00000025236.9	ENSMUSG00000024378.10	Stard4	chr18	protein_coding	StAR-related lipid transfer (START) domain containing 4
chr18	33336868;33338378	33338274;33339173	-	33336868;33338218	33338104;33339173	MXE	0.5	100	100	ENSMUST00000025236.9	ENSMUSG00000024378.10	Stard4	chr18	protein_coding	StAR-related lipid transfer (START) domain containing 4
chr18	33336868	33339173	-	33336868;33338378	33338274;33339173	ES	0.33	50	50	ENSMUST00000119991.8	ENSMUSG00000024378.10	Stard4	chr18	protein_coding	StAR-related lipid transfer (START) domain containing 4
chr18	33336868;33338378	33338104;33339173	-	33336868	33339173	cassetteExon	0.5	100	100	ENSMUST00000118990.2	ENSMUSG00000024378.10	Stard4	chr18	protein_coding	StAR-related lipid transfer (START) domain containing 4
chr18	33336868	33339173	-	33338218	33339173	3pMXE	0.33	50	50	ENSMUST00000141617.2	ENSMUSG00000024378.10	Stard4	chr18	protein_coding	StAR-related lipid transfer (START) domain containing 4
chr18	33338378	33339173	-	33338218	33339173	A3SS	0.33	50	50	ENSMUST00000141617.2	ENSMUSG00000024378.10	Stard4	chr18	protein_coding	StAR-related lipid transfer (START) domain containing 4
chr18	33596472	33596653	-	33596472	33596906	A5SS	0.5	50	50	ENSMUST00000168890.2	ENSMUSG00000042834.16	Nrep	chr18	protein_coding	neuronal regeneration related protein
chr18	33599914	33603829	+	33597525	33603829	A5SS	0.5	50	50	ENSMUST00000238186.2	ENSMUSG00000118292.2	Gm10549	chr18	lncRNA	predicted gene 10549
chr18	33928177	33928906	+	33928177;33928498	33928436;33928906	ES	0.5	50	50	ENSMUST00000146010.3	ENSMUSG00000087590.3	Epb41l4aos	chr18	lncRNA	erythrocyte membrane protein band 4.1 like 4a, opposite strand
chr18	33961209	33961780	-	33961270	33961780	A3SS	0.5	50	50	ENSMUST00000025234.7	ENSMUSG00000024376.8	Epb41l4a	chr18	protein_coding	erythrocyte membrane protein band 4.1 like 4a
chr18	33965738	33965814	-	33965738	33987289	A5SS	0.5	50	50	ENSMUST00000025234.7	ENSMUSG00000024376.8	Epb41l4a	chr18	protein_coding	erythrocyte membrane protein band 4.1 like 4a
chr18	34024529	34024880	-	34024529	34054883	A5SS	0.5	50	50	ENSMUST00000025234.7	ENSMUSG00000024376.8	Epb41l4a	chr18	protein_coding	erythrocyte membrane protein band 4.1 like 4a
chr18	34354329;34394210	34394058;34401351	+	34354329	34401351	cassetteExon	0.5	100	100	ENSMUST00000171187.8	ENSMUSG00000005871.16	Apc	chr18	protein_coding	APC, WNT signaling pathway regulator
chr18	34354329;34399275	34399111;34401351	+	34354329	34401351	cassetteExon	0.5	100	100	ENSMUST00000171187.8	ENSMUSG00000005871.16	Apc	chr18	protein_coding	APC, WNT signaling pathway regulator
chr18	34409730;34412405	34412322;34422891	+	34409730	34422891	cassetteExon	0.5	100	100	ENSMUST00000171187.8	ENSMUSG00000005871.16	Apc	chr18	protein_coding	APC, WNT signaling pathway regulator
chr18	34422995	34423097	+	34422995	34429084	A3SS	0.5	50	50	ENSMUST00000171187.8	ENSMUSG00000005871.16	Apc	chr18	protein_coding	APC, WNT signaling pathway regulator
chr18	34415062	34429084	+	34422995	34429084	A5SS&ES	0.5	50	50	ENSMUST00000171187.8	ENSMUSG00000005871.16	Apc	chr18	protein_coding	APC, WNT signaling pathway regulator
chr18	34434368	34437636	+	34433114	34437636	A5SS	0.5	50	50	ENSMUST00000171187.8	ENSMUSG00000005871.16	Apc	chr18	protein_coding	APC, WNT signaling pathway regulator
chr18	34354329;34399275	34399111;34401351	+	34354329;34394210	34394058;34401351	MXE	0.5	100	100	ENSMUST00000115781.10	ENSMUSG00000005871.16	Apc	chr18	protein_coding	APC, WNT signaling pathway regulator
chr18	34409730;34422995	34422891;34429084	+	34409730;34415062	34412322;34429084	MXE	0.5	100	100	ENSMUST00000115781.10	ENSMUSG00000005871.16	Apc	chr18	protein_coding	APC, WNT signaling pathway regulator
chr18	34412405;34422995	34422891;34429084	+	34412405;34415062	34415060;34429084	MXE	0.5	100	100	ENSMUST00000115781.10	ENSMUSG00000005871.16	Apc	chr18	protein_coding	APC, WNT signaling pathway regulator
chr18	34380787	34394058	+	34354329	34394058	A5SS	0.5	50	50	ENSMUST00000115781.10	ENSMUSG00000005871.16	Apc	chr18	protein_coding	APC, WNT signaling pathway regulator
chr18	34412405	34415060	+	34412405	34422891	A3SS	0.5	50	50	ENSMUST00000066133.7	ENSMUSG00000005871.16	Apc	chr18	protein_coding	APC, WNT signaling pathway regulator
chr18	34399275	34401351	+	34394210	34401351	A5SS	0.5	50	50	ENSMUST00000066133.7	ENSMUSG00000005871.16	Apc	chr18	protein_coding	APC, WNT signaling pathway regulator
chr18	34433114	34437636	+	34433114	34443746	A3SS	0.5	50	50	ENSMUST00000165590.2	ENSMUSG00000005871.16	Apc	chr18	protein_coding	APC, WNT signaling pathway regulator
chr18	34439432	34443746	+	34433114	34443746	A5SS	0.5	50	50	ENSMUST00000165590.2	ENSMUSG00000005871.16	Apc	chr18	protein_coding	APC, WNT signaling pathway regulator
chr18	34464878	34467510	+	34464878;34467417	34467346;34467510	ES	0.5	50	50	ENSMUST00000126518.8	ENSMUSG00000014504.17	Srp19	chr18	protein_coding	signal recognition particle 19
chr18	34464878;34466115	34465959;34467346	+	34464878	34467346	cassetteExon	0.5	100	100	ENSMUST00000126518.8	ENSMUSG00000014504.17	Srp19	chr18	protein_coding	signal recognition particle 19
chr18	34464312	34464803	+	34464164	34464803	A5SS	0.5	50	50	ENSMUST00000126518.8	ENSMUSG00000014504.17	Srp19	chr18	protein_coding	signal recognition particle 19
chr18	34464312	34467346	+	34464878	34467346	A5SS&ES	0.33	50	50	ENSMUST00000126518.8	ENSMUSG00000014504.17	Srp19	chr18	protein_coding	signal recognition particle 19
chr18	34464312;34464878	34464803;34467346	+	34464312	34467346	cassetteExon	0.5	100	100	ENSMUST00000131713.8	ENSMUSG00000014504.17	Srp19	chr18	protein_coding	signal recognition particle 19
chr18	34464312;34464878	34464803;34467510	+	34464312;34467417	34467346;34467510	MXE	0.5	100	100	ENSMUST00000131713.8	ENSMUSG00000014504.17	Srp19	chr18	protein_coding	signal recognition particle 19
chr18	34466115	34467346	+	34464312	34467346	A5SS	0.33	50	50	ENSMUST00000131713.8	ENSMUSG00000014504.17	Srp19	chr18	protein_coding	signal recognition particle 19
chr18	34464312	34467346	+	34464312	34464803	A3SS	0.5	50	50	ENSMUST00000140279.8	ENSMUSG00000014504.17	Srp19	chr18	protein_coding	signal recognition particle 19
chr18	34464878	34467510	+	34467417	34467510	A5SS	0.5	50	50	ENSMUST00000140279.8	ENSMUSG00000014504.17	Srp19	chr18	protein_coding	signal recognition particle 19
chr18	34464878	34465959	+	34464878	34467510	A3SS	0.33	50	50	ENSMUST00000119329.8	ENSMUSG00000014504.17	Srp19	chr18	protein_coding	signal recognition particle 19
chr18	34482856	34505458	-	34482856;34490283	34490145;34505458	ES	0.33	50	50	ENSMUST00000006027.7	ENSMUSG00000005873.7	Reep5	chr18	protein_coding	receptor accessory protein 5
chr18	34505551	34506951	-	34505551	34506257	5pMXE	0.5	50	50	ENSMUST00000006027.7	ENSMUSG00000005873.7	Reep5	chr18	protein_coding	receptor accessory protein 5
chr18	34482856;34489574	34489477;34490145	-	34482856	34490145	cassetteExon	0.5	100	100	ENSMUST00000006027.7	ENSMUSG00000005873.7	Reep5	chr18	protein_coding	receptor accessory protein 5
chr18	34490283;34497190	34497163;34505458	-	34490283	34505458	cassetteExon	0.5	100	100	ENSMUST00000006027.7	ENSMUSG00000005873.7	Reep5	chr18	protein_coding	receptor accessory protein 5
chr18	34497190	34505458	-	34482856	34505458	A3SS	0.33	50	50	ENSMUST00000236887.2	ENSMUSG00000005873.7	Reep5	chr18	protein_coding	receptor accessory protein 5
chr18	34482856	34489477	-	34482856	34505458	A5SS	0.33	50	50	ENSMUST00000236887.2	ENSMUSG00000005873.7	Reep5	chr18	protein_coding	receptor accessory protein 5
chr18	34482856	34505458	-	34490283	34505458	3pMXE	0.33	50	50	ENSMUST00000235153.2	ENSMUSG00000005873.7	Reep5	chr18	protein_coding	receptor accessory protein 5
chr18	34542550	34542863	+	34541720	34542863	A5SS	0.5	50	50	ENSMUST00000236131.2	ENSMUSG00000014503.16	Pkd2l2	chr18	protein_coding	polycystic kidney disease 2-like 2
chr18	34550102	34558069	+	34550102	34554101	3pMXE	0.5	50	50	ENSMUST00000235732.2	ENSMUSG00000014503.16	Pkd2l2	chr18	protein_coding	polycystic kidney disease 2-like 2
chr18	34541720	34542863	+	34541720	34547516	A3SS	0.5	50	50	ENSMUST00000235732.2	ENSMUSG00000014503.16	Pkd2l2	chr18	protein_coding	polycystic kidney disease 2-like 2
chr18	34545867	34547516	+	34541720	34547516	A5SS	0.5	50	50	ENSMUST00000235732.2	ENSMUSG00000014503.16	Pkd2l2	chr18	protein_coding	polycystic kidney disease 2-like 2
chr18	34571885	34574643	+	34571885	34575309	A3SS	0.5	50	50	ENSMUST00000014647.9	ENSMUSG00000014503.16	Pkd2l2	chr18	protein_coding	polycystic kidney disease 2-like 2
chr18	34577055	34578585	-	34577055;34578493	34578330;34578585	ES	0.5	50	50	ENSMUST00000040506.8	ENSMUSG00000036501.8	Fam13b	chr18	protein_coding	family with sequence similarity 13, member B
chr18	34578668	34581421	-	34578668;34581174	34581079;34581421	ES	0.5	50	50	ENSMUST00000040506.8	ENSMUSG00000036501.8	Fam13b	chr18	protein_coding	family with sequence similarity 13, member B
chr18	34590927;34592475	34592410;34595114	-	34590927	34595114	cassetteExon	0.5	100	100	ENSMUST00000040506.8	ENSMUSG00000036501.8	Fam13b	chr18	protein_coding	family with sequence similarity 13, member B
chr18	34596062;34597389	34597216;34598209	-	34596062	34598209	cassetteExon	0.5	100	100	ENSMUST00000040506.8	ENSMUSG00000036501.8	Fam13b	chr18	protein_coding	family with sequence similarity 13, member B
chr18	34606738;34613631	34613508;34620032	-	34606738	34620032	cassetteExon	0.5	100	100	ENSMUST00000040506.8	ENSMUSG00000036501.8	Fam13b	chr18	protein_coding	family with sequence similarity 13, member B
chr18	34583946	34584261	-	34581504	34584261	A3SS	0.5	50	50	ENSMUST00000040506.8	ENSMUSG00000036501.8	Fam13b	chr18	protein_coding	family with sequence similarity 13, member B
chr18	34624165	34627210	-	34620192	34627210	A3SS	0.5	50	50	ENSMUST00000040506.8	ENSMUSG00000036501.8	Fam13b	chr18	protein_coding	family with sequence similarity 13, member B
chr18	34627746	34632739	-	34631212	34632739	A3SS&ES	0.5	50	50	ENSMUST00000040506.8	ENSMUSG00000036501.8	Fam13b	chr18	protein_coding	family with sequence similarity 13, member B
chr18	34596062	34597536	-	34596062	34598209	A5SS	0.33	50	50	ENSMUST00000040506.8	ENSMUSG00000036501.8	Fam13b	chr18	protein_coding	family with sequence similarity 13, member B
chr18	34577055	34578585	-	34578493	34578585	A3SS	0.5	50	50	ENSMUST00000236786.2	ENSMUSG00000036501.8	Fam13b	chr18	protein_coding	family with sequence similarity 13, member B
chr18	34596062	34597216	-	34596062	34597536	A5SS	0.33	50	50	ENSMUST00000235529.2	ENSMUSG00000036501.8	Fam13b	chr18	protein_coding	family with sequence similarity 13, member B
chr18	34700207	34711611	-	34700207;34704714	34704509;34711611	ES	0.5	50	50	ENSMUST00000134875.8	ENSMUSG00000035984.15	Nme5	chr18	protein_coding	NME/NM23 family member 5
chr18	34700207;34702951	34702851;34704509	-	34700207	34704509	cassetteExon	0.5	100	100	ENSMUST00000134875.8	ENSMUSG00000035984.15	Nme5	chr18	protein_coding	NME/NM23 family member 5
chr18	34700207	34702851	-	34700207	34711611	A5SS	0.33	50	50	ENSMUST00000155114.2	ENSMUSG00000035984.15	Nme5	chr18	protein_coding	NME/NM23 family member 5
chr18	34714030;34717338	34717267;34717891	-	34714030	34717891	cassetteExon	0.5	100	100	ENSMUST00000056932.9	ENSMUSG00000049357.12	Brd8dc	chr18	protein_coding	BRD8 domain containing
chr18	34738741	34739728	-	34738741;34739519	34739473;34739728	ES	0.5	50	50	ENSMUST00000003876.10	ENSMUSG00000003778.15	Brd8	chr18	protein_coding	bromodomain containing 8
chr18	34741108	34742858	-	34741108;34741680	34741471;34742858	ES	0.5	50	50	ENSMUST00000003876.10	ENSMUSG00000003778.15	Brd8	chr18	protein_coding	bromodomain containing 8
chr18	34743002	34744185	-	34743002;34743681	34743463;34744185	ES	0.5	50	50	ENSMUST00000003876.10	ENSMUSG00000003778.15	Brd8	chr18	protein_coding	bromodomain containing 8
chr18	34744321;34744543	34744478;34746090	-	34744321	34746090	cassetteExon	0.5	100	100	ENSMUST00000003876.10	ENSMUSG00000003778.15	Brd8	chr18	protein_coding	bromodomain containing 8
chr18	34741108	34742858	-	34741108	34741471	A5SS	0.5	50	50	ENSMUST00000152612.8	ENSMUSG00000003778.15	Brd8	chr18	protein_coding	bromodomain containing 8
chr18	34758113	34758511	+	34757905	34758511	A5SS	0.33	50	50	ENSMUST00000167161.9	ENSMUSG00000003779.17	Kif20a	chr18	protein_coding	kinesin family member 20A
chr18	34758316	34758511	+	34757905	34758511	A5SS	0.33	50	50	ENSMUST00000167161.9	ENSMUSG00000003779.17	Kif20a	chr18	protein_coding	kinesin family member 20A
chr18	34758316	34758511	+	34758113	34758511	A5SS	0.33	50	50	ENSMUST00000237407.2	ENSMUSG00000003779.17	Kif20a	chr18	protein_coding	kinesin family member 20A
chr18	34882664	34884167	-	34882664;34884016	34883791;34884167	ES	0.5	50	50	ENSMUST00000060710.9	ENSMUSG00000044201.11	Cdc25c	chr18	protein_coding	cell division cycle 25C
chr18	34878077	34880277	-	34878022	34880277	A3SS	0.5	50	50	ENSMUST00000060710.9	ENSMUSG00000044201.11	Cdc25c	chr18	protein_coding	cell division cycle 25C
chr18	34882664	34884167	-	34882664	34883791	A5SS	0.5	50	50	ENSMUST00000237620.2	ENSMUSG00000044201.11	Cdc25c	chr18	protein_coding	cell division cycle 25C
chr18	34885188	34887537	+	34885188	34891285	A3SS	0.5	50	50	ENSMUST00000181641.2	ENSMUSG00000097755.3	2010110K18Rik	chr18	lncRNA	RIKEN cDNA 2010110K18 gene
chr18	34889445	34891285	+	34885188	34891285	A5SS	0.5	50	50	ENSMUST00000181641.2	ENSMUSG00000097755.3	2010110K18Rik	chr18	lncRNA	RIKEN cDNA 2010110K18 gene
chr18	34895777	34901224	+	34895777	34896126	A3SS&ES	0.5	50	50	ENSMUST00000049281.12	ENSMUSG00000034300.18	Fam53c	chr18	protein_coding	family with sequence similarity 53, member C
chr18	34892650	34895548	+	34892197	34895548	A5SS	0.5	50	50	ENSMUST00000049281.12	ENSMUSG00000034300.18	Fam53c	chr18	protein_coding	family with sequence similarity 53, member C
chr18	34928833	34932338	+	34928833;34929965	34929841;34932338	ES	0.5	50	50	ENSMUST00000043775.9	ENSMUSG00000038773.12	Kdm3b	chr18	protein_coding	KDM3B lysine (K)-specific demethylase 3B
chr18	34932412	34941294	+	34932412;34937102	34936503;34941294	ES	0.5	50	50	ENSMUST00000043775.9	ENSMUSG00000038773.12	Kdm3b	chr18	protein_coding	KDM3B lysine (K)-specific demethylase 3B
chr18	34946614;34949369	34949337;34952834	+	34946614	34952834	cassetteExon	0.5	100	100	ENSMUST00000043775.9	ENSMUSG00000038773.12	Kdm3b	chr18	protein_coding	KDM3B lysine (K)-specific demethylase 3B
chr18	34962311	34963182	+	34962351	34963182	A5SS	0.5	50	50	ENSMUST00000043775.9	ENSMUSG00000038773.12	Kdm3b	chr18	protein_coding	KDM3B lysine (K)-specific demethylase 3B
chr18	34932412	34936503	+	34932412	34941294	A3SS	0.5	50	50	ENSMUST00000225195.2	ENSMUSG00000038773.12	Kdm3b	chr18	protein_coding	KDM3B lysine (K)-specific demethylase 3B
chr18	34937102	34941294	+	34932412	34941294	A5SS	0.5	50	50	ENSMUST00000225195.2	ENSMUSG00000038773.12	Kdm3b	chr18	protein_coding	KDM3B lysine (K)-specific demethylase 3B
chr18	35116047;35124396	35124198;35133097	+	35116047	35133097	cassetteExon	0.5	100	100	ENSMUST00000237091.2	ENSMUSG00000118380.2	Gm36037	chr18	lncRNA	predicted gene, 36037
chr18	35136222;35212405	35212199;35242287	+	35136222	35242287	cassetteExon	0.5	100	100	ENSMUST00000237091.2	ENSMUSG00000118380.2	Gm36037	chr18	lncRNA	predicted gene, 36037
chr18	35285760	35307306	+	35285760;35287593	35287398;35307306	ES	0.5	50	50	ENSMUST00000042345.8	ENSMUSG00000037815.8	Ctnna1	chr18	protein_coding	catenin (cadherin associated protein), alpha 1
chr18	35252034;35271174	35271038;35285654	+	35252034	35285654	cassetteExon	0.5	100	100	ENSMUST00000042345.8	ENSMUSG00000037815.8	Ctnna1	chr18	protein_coding	catenin (cadherin associated protein), alpha 1
chr18	35252543	35285654	+	35252034	35285654	A5SS	0.33	50	50	ENSMUST00000042345.8	ENSMUSG00000037815.8	Ctnna1	chr18	protein_coding	catenin (cadherin associated protein), alpha 1
chr18	35348331	35355118	+	35315606	35355118	A5SS	0.33	50	50	ENSMUST00000042345.8	ENSMUSG00000037815.8	Ctnna1	chr18	protein_coding	catenin (cadherin associated protein), alpha 1
chr18	35348464	35355118	+	35315606	35355118	A5SS	0.33	50	50	ENSMUST00000042345.8	ENSMUSG00000037815.8	Ctnna1	chr18	protein_coding	catenin (cadherin associated protein), alpha 1
chr18	35252543	35285654	+	35271174	35285654	A5SS&ES	0.33	50	50	ENSMUST00000236037.2	ENSMUSG00000037815.8	Ctnna1	chr18	protein_coding	catenin (cadherin associated protein), alpha 1
chr18	35348464	35355118	+	35348331	35355118	A5SS	0.33	50	50	ENSMUST00000235449.2	ENSMUSG00000037815.8	Ctnna1	chr18	protein_coding	catenin (cadherin associated protein), alpha 1
chr18	35346868	35347646	-	35347296	35347646	A3SS	0.5	50	50	ENSMUST00000091636.5	ENSMUSG00000071862.4	Lrrtm2	chr18	protein_coding	leucine rich repeat transmembrane neuronal 2
chr18	35458528	35474151	-	35458528;35461359	35461256;35474151	ES	0.5	50	50	ENSMUST00000236387.2	ENSMUSG00000024357.11	Sil1	chr18	protein_coding	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
chr18	35474250	35481693	-	35474250	35475883	5pMXE	0.33	50	50	ENSMUST00000236387.2	ENSMUSG00000024357.11	Sil1	chr18	protein_coding	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
chr18	35474250	35536379	-	35474250	35475883	5pMXE	0.33	50	50	ENSMUST00000236387.2	ENSMUSG00000024357.11	Sil1	chr18	protein_coding	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
chr18	35411888	35450895	-	35402763	35450895	A3SS	0.5	50	50	ENSMUST00000236387.2	ENSMUSG00000024357.11	Sil1	chr18	protein_coding	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
chr18	35399962	35402143	-	35399962	35402092	A5SS	0.5	50	50	ENSMUST00000236387.2	ENSMUSG00000024357.11	Sil1	chr18	protein_coding	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
chr18	35402763	35432774	-	35402763	35450895	A5SS	0.5	50	50	ENSMUST00000236387.2	ENSMUSG00000024357.11	Sil1	chr18	protein_coding	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
chr18	35474250;35481813	35481693;35551110	-	35474250;35536522	35536379;35551110	MXE	0.5	100	100	ENSMUST00000237896.2	ENSMUSG00000024357.11	Sil1	chr18	protein_coding	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
chr18	35551248;35571433	35571320;35631844	-	35551248	35631844	cassetteExon	0.5	100	100	ENSMUST00000237896.2	ENSMUSG00000024357.11	Sil1	chr18	protein_coding	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
chr18	35626286	35631844	-	35551248	35631844	A3SS	0.33	50	50	ENSMUST00000237896.2	ENSMUSG00000024357.11	Sil1	chr18	protein_coding	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
chr18	35571433	35632632	-	35571433	35631844	5pMXE	0.33	50	50	ENSMUST00000235619.2	ENSMUSG00000024357.11	Sil1	chr18	protein_coding	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
chr18	35571433;35626286	35625912;35631844	-	35571433	35631844	cassetteExon	0.5	100	100	ENSMUST00000235619.2	ENSMUSG00000024357.11	Sil1	chr18	protein_coding	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
chr18	35551248	35571320	-	35481808	35571320	A3SS	0.25	50	50	ENSMUST00000235619.2	ENSMUSG00000024357.11	Sil1	chr18	protein_coding	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
chr18	35551248	35631844	-	35571433	35631844	A3SS&ES	0.33	50	50	ENSMUST00000235619.2	ENSMUSG00000024357.11	Sil1	chr18	protein_coding	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
chr18	35563360	35571320	-	35481808	35571320	A3SS	0.25	50	50	ENSMUST00000235619.2	ENSMUSG00000024357.11	Sil1	chr18	protein_coding	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
chr18	35565604	35571320	-	35481808	35571320	A3SS	0.25	50	50	ENSMUST00000235619.2	ENSMUSG00000024357.11	Sil1	chr18	protein_coding	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
chr18	35474250	35536379	-	35474250	35481693	A5SS&ES	0.33	50	50	ENSMUST00000235619.2	ENSMUSG00000024357.11	Sil1	chr18	protein_coding	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
chr18	35563360	35571320	-	35551248	35571320	A3SS	0.25	50	50	ENSMUST00000025215.10	ENSMUSG00000024357.11	Sil1	chr18	protein_coding	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
chr18	35565604	35571320	-	35551248	35571320	A3SS	0.25	50	50	ENSMUST00000025215.10	ENSMUSG00000024357.11	Sil1	chr18	protein_coding	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
chr18	35536522	35551110	-	35481813	35551110	A3SS	0.5	50	50	ENSMUST00000235778.2	ENSMUSG00000024357.11	Sil1	chr18	protein_coding	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
chr18	35551248	35631844	-	35551248	35571320	A5SS&ES	0.5	50	50	ENSMUST00000237232.2	ENSMUSG00000024357.11	Sil1	chr18	protein_coding	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
chr18	35571433	35625912	-	35571433	35632632	A5SS	0.33	50	50	ENSMUST00000237232.2	ENSMUSG00000024357.11	Sil1	chr18	protein_coding	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
chr18	35563360	35571320	-	35563360;35565604	35565517;35571320	ES	0.5	50	50	ENSMUST00000236007.2	ENSMUSG00000024357.11	Sil1	chr18	protein_coding	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
chr18	35690422	35710611	+	35690422	35704896	3pMXE	0.33	50	50	ENSMUST00000235176.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35690422;35692561	35692396;35704896	+	35690422	35704896	cassetteExon	0.5	100	100	ENSMUST00000235176.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35690444	35704896	+	35690422	35704896	A5SS	0.1	50	50	ENSMUST00000235176.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35690458	35704896	+	35690422	35704896	A5SS	0.1	50	50	ENSMUST00000235176.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35695312	35704896	+	35690422	35704896	A5SS	0.1	50	50	ENSMUST00000235176.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35695345	35704896	+	35690422	35704896	A5SS	0.1	50	50	ENSMUST00000235176.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35695574	35704896	+	35690422	35704896	A5SS	0.1	50	50	ENSMUST00000235176.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35695594	35704896	+	35690422	35704896	A5SS	0.1	50	50	ENSMUST00000235176.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35695907	35704896	+	35690422	35704896	A5SS	0.1	50	50	ENSMUST00000235176.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35696153	35704896	+	35690422	35704896	A5SS	0.1	50	50	ENSMUST00000235176.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35690444	35692396	+	35690444	35710611	A3SS	0.33	50	50	ENSMUST00000235801.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35690444	35704896	+	35690444	35710611	A3SS	0.33	50	50	ENSMUST00000235801.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35690422	35710611	+	35690444	35710611	A5SS	0.16	50	50	ENSMUST00000235801.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35695312	35710611	+	35690444	35710611	A5SS	0.16	50	50	ENSMUST00000235801.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35695345	35710611	+	35690444	35710611	A5SS	0.16	50	50	ENSMUST00000235801.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35695345	35711469	+	35710672	35711469	A5SS&ES	0.5	50	50	ENSMUST00000235801.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35695574	35710611	+	35690444	35710611	A5SS	0.16	50	50	ENSMUST00000235801.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35705988	35710611	+	35690444	35710611	A5SS	0.16	50	50	ENSMUST00000235801.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35690422	35692396	+	35690422	35710611	A3SS	0.33	50	50	ENSMUST00000237592.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35695312	35710611	+	35690422	35710611	A5SS	0.16	50	50	ENSMUST00000237592.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35695345	35710611	+	35690422	35710611	A5SS	0.16	50	50	ENSMUST00000237592.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35695574	35710611	+	35690422	35710611	A5SS	0.16	50	50	ENSMUST00000237592.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35705988	35710611	+	35690422	35710611	A5SS	0.16	50	50	ENSMUST00000237592.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35712363	35714223	+	35712371	35714223	A5SS	0.5	50	50	ENSMUST00000237592.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35690444	35704896	+	35690444	35692396	3pMXE	0.33	50	50	ENSMUST00000235585.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35690422	35692396	+	35690444	35692396	A5SS	0.5	50	50	ENSMUST00000235585.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35690444	35704896	+	35690458	35704896	A5SS	0.1	50	50	ENSMUST00000237907.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35692561	35704896	+	35690458	35704896	A5SS	0.1	50	50	ENSMUST00000237907.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35695312	35704896	+	35690458	35704896	A5SS	0.1	50	50	ENSMUST00000237907.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35695345	35704896	+	35690458	35704896	A5SS	0.1	50	50	ENSMUST00000237907.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35695574	35704896	+	35690458	35704896	A5SS	0.1	50	50	ENSMUST00000237907.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35695594	35704896	+	35690458	35704896	A5SS	0.1	50	50	ENSMUST00000237907.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35695907	35704896	+	35690458	35704896	A5SS	0.1	50	50	ENSMUST00000237907.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35696153	35704896	+	35690458	35704896	A5SS	0.1	50	50	ENSMUST00000237907.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35690444;35692561	35692396;35704896	+	35690444	35704896	cassetteExon	0.5	100	100	ENSMUST00000237230.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35695312	35704896	+	35690444	35704896	A5SS	0.1	50	50	ENSMUST00000237230.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35695345	35704896	+	35690444	35704896	A5SS	0.1	50	50	ENSMUST00000237230.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35695574	35704896	+	35690444	35704896	A5SS	0.1	50	50	ENSMUST00000237230.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35695594	35704896	+	35690444	35704896	A5SS	0.1	50	50	ENSMUST00000237230.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35695907	35704896	+	35690444	35704896	A5SS	0.1	50	50	ENSMUST00000237230.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35696153	35704896	+	35690444	35704896	A5SS	0.1	50	50	ENSMUST00000237230.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35690444	35704896	+	35692561	35704896	A5SS&ES	0.1	50	50	ENSMUST00000236097.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35695312	35704896	+	35692561	35704896	A5SS	0.1	50	50	ENSMUST00000236097.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35695345	35704896	+	35692561	35704896	A5SS	0.1	50	50	ENSMUST00000236097.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35695574	35704896	+	35692561	35704896	A5SS	0.1	50	50	ENSMUST00000236097.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35695594	35704896	+	35692561	35704896	A5SS	0.1	50	50	ENSMUST00000236097.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35695907	35704896	+	35692561	35704896	A5SS	0.1	50	50	ENSMUST00000236097.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35696153	35704896	+	35692561	35704896	A5SS	0.1	50	50	ENSMUST00000236097.2	ENSMUSG00000117694.2	Snhg4	chr18	protein_coding	small nucleolar RNA host gene 4
chr18	35695345	35710611	+	35695345;35705988	35704896;35710611	ES	0.25	50	50	ENSMUST00000235769.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35695312	35704896	+	35695345	35704896	A5SS	0.1	50	50	ENSMUST00000235769.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35695312	35710611	+	35705988	35710611	A5SS&ES	0.25	50	50	ENSMUST00000235769.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35695574	35704896	+	35695345	35704896	A5SS	0.1	50	50	ENSMUST00000235769.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35695574	35710611	+	35705988	35710611	A5SS&ES	0.25	50	50	ENSMUST00000235769.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35695594	35704896	+	35695345	35704896	A5SS	0.1	50	50	ENSMUST00000235769.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35695907	35704896	+	35695345	35704896	A5SS	0.1	50	50	ENSMUST00000235769.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35696153	35704896	+	35695345	35704896	A5SS	0.1	50	50	ENSMUST00000235769.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35695312	35710611	+	35695312	35704896	3pMXE	0.33	50	50	ENSMUST00000236860.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35695312;35696153	35695948;35704896	+	35695312	35704896	cassetteExon	0.5	100	100	ENSMUST00000236860.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35695574	35704896	+	35695312	35704896	A5SS	0.1	50	50	ENSMUST00000236860.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35695594	35704896	+	35695312	35704896	A5SS	0.1	50	50	ENSMUST00000236860.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35695907	35704896	+	35695312	35704896	A5SS	0.1	50	50	ENSMUST00000236860.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35695574	35704896	+	35696153	35704896	A5SS&ES	0.16	50	50	ENSMUST00000237780.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35695594	35704896	+	35696153	35704896	A5SS&ES	0.16	50	50	ENSMUST00000237780.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35695907	35704896	+	35696153	35704896	A5SS&ES	0.16	50	50	ENSMUST00000237780.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35695312	35695948	+	35695312	35710611	A3SS	0.33	50	50	ENSMUST00000236507.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35695345	35710611	+	35695312	35710611	A5SS	0.16	50	50	ENSMUST00000236507.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35695574	35710611	+	35695312	35710611	A5SS	0.16	50	50	ENSMUST00000236507.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35695345;35710672	35710611;35711469	+	35695345	35711469	cassetteExon	0.5	100	100	ENSMUST00000235960.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35695345	35704896	+	35695345	35711469	A3SS	0.33	50	50	ENSMUST00000235960.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35695345	35704896	+	35695345	35710611	A3SS	0.33	50	50	ENSMUST00000237018.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35695574	35710611	+	35695345	35710611	A5SS	0.16	50	50	ENSMUST00000237018.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35705988	35710611	+	35695345	35710611	A5SS	0.16	50	50	ENSMUST00000237018.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35695574;35705988	35705820;35710611	+	35695574	35710611	cassetteExon	0.5	100	100	ENSMUST00000237365.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35695574	35704896	+	35695574	35710611	A3SS	0.33	50	50	ENSMUST00000237365.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35695574	35710611	+	35695574;35705988	35704896;35710611	ES	0.5	50	50	ENSMUST00000235199.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35695574	35705820	+	35695574	35704896	A3SS	0.33	50	50	ENSMUST00000235199.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35695594	35704896	+	35695574	35704896	A5SS	0.1	50	50	ENSMUST00000235199.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35695907	35704896	+	35695574	35704896	A5SS	0.1	50	50	ENSMUST00000235199.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35695907	35704896	+	35695594	35704896	A5SS	0.1	50	50	ENSMUST00000237744.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35695312	35704896	+	35696153	35704896	5pMXE	0.1	50	50	ENSMUST00000235851.2	ENSMUSG00000037236.17	Matr3	chr18	protein_coding	matrin 3
chr18	35731812;35733170	35733098;35743924	+	35731812	35743924	cassetteExon	0.5	100	100	ENSMUST00000041314.17	ENSMUSG00000037058.17	Paip2	chr18	protein_coding	polyadenylate-binding protein-interacting protein 2
chr18	35731812;35741872	35741791;35743924	+	35731812	35743924	cassetteExon	0.5	100	100	ENSMUST00000041314.17	ENSMUSG00000037058.17	Paip2	chr18	protein_coding	polyadenylate-binding protein-interacting protein 2
chr18	35731812;35742726	35742646;35743924	+	35731812	35743924	cassetteExon	0.5	100	100	ENSMUST00000041314.17	ENSMUSG00000037058.17	Paip2	chr18	protein_coding	polyadenylate-binding protein-interacting protein 2
chr18	35731896	35743924	+	35731812	35743924	A5SS	0.2	50	50	ENSMUST00000041314.17	ENSMUSG00000037058.17	Paip2	chr18	protein_coding	polyadenylate-binding protein-interacting protein 2
chr18	35731812;35733170	35733098;35743924	+	35731812;35742726	35742646;35743924	MXE	0.5	100	100	ENSMUST00000236666.2	ENSMUSG00000037058.17	Paip2	chr18	protein_coding	polyadenylate-binding protein-interacting protein 2
chr18	35731812;35741872	35741791;35743924	+	35731812;35742726	35742646;35743924	MXE	0.5	100	100	ENSMUST00000236666.2	ENSMUSG00000037058.17	Paip2	chr18	protein_coding	polyadenylate-binding protein-interacting protein 2
chr18	35731896	35743924	+	35742726	35743924	A5SS&ES	0.2	50	50	ENSMUST00000236666.2	ENSMUSG00000037058.17	Paip2	chr18	protein_coding	polyadenylate-binding protein-interacting protein 2
chr18	35731812;35741872	35741791;35743924	+	35731812;35733170	35733098;35743924	MXE	0.5	100	100	ENSMUST00000236020.2	ENSMUSG00000037058.17	Paip2	chr18	protein_coding	polyadenylate-binding protein-interacting protein 2
chr18	35733170;35741872	35741791;35743924	+	35733170	35743924	cassetteExon	0.5	100	100	ENSMUST00000236020.2	ENSMUSG00000037058.17	Paip2	chr18	protein_coding	polyadenylate-binding protein-interacting protein 2
chr18	35731896	35743924	+	35733170	35743924	A5SS&ES	0.2	50	50	ENSMUST00000236020.2	ENSMUSG00000037058.17	Paip2	chr18	protein_coding	polyadenylate-binding protein-interacting protein 2
chr18	35732811	35733098	+	35731812	35733098	A5SS	0.5	50	50	ENSMUST00000236020.2	ENSMUSG00000037058.17	Paip2	chr18	protein_coding	polyadenylate-binding protein-interacting protein 2
chr18	35731812;35733170	35733098;35741791	+	35731812	35741791	cassetteExon	0.5	100	100	ENSMUST00000235400.2	ENSMUSG00000037058.17	Paip2	chr18	protein_coding	polyadenylate-binding protein-interacting protein 2
chr18	35731896	35743924	+	35741872	35743924	A5SS&ES	0.2	50	50	ENSMUST00000235400.2	ENSMUSG00000037058.17	Paip2	chr18	protein_coding	polyadenylate-binding protein-interacting protein 2
chr18	35732671	35732766	+	35732363	35732766	A5SS	0.5	50	50	ENSMUST00000235210.2	ENSMUSG00000037058.17	Paip2	chr18	protein_coding	polyadenylate-binding protein-interacting protein 2
chr18	35742726	35743924	+	35741872	35743924	A5SS	0.33	50	50	ENSMUST00000235210.2	ENSMUSG00000037058.17	Paip2	chr18	protein_coding	polyadenylate-binding protein-interacting protein 2
chr18	35731812	35743924	+	35733170	35743924	5pMXE	0.2	50	50	ENSMUST00000236414.2	ENSMUSG00000037058.17	Paip2	chr18	protein_coding	polyadenylate-binding protein-interacting protein 2
chr18	35742726	35743924	+	35733170	35743924	A5SS	0.2	50	50	ENSMUST00000236414.2	ENSMUSG00000037058.17	Paip2	chr18	protein_coding	polyadenylate-binding protein-interacting protein 2
chr18	35731812	35743924	+	35741872	35743924	5pMXE	0.2	50	50	ENSMUST00000235211.2	ENSMUSG00000037058.17	Paip2	chr18	protein_coding	polyadenylate-binding protein-interacting protein 2
chr18	35733170	35743924	+	35741872	35743924	5pMXE	0.2	50	50	ENSMUST00000235211.2	ENSMUSG00000037058.17	Paip2	chr18	protein_coding	polyadenylate-binding protein-interacting protein 2
chr18	35753285	35754820	-	35752705	35754820	A3SS	0.5	50	50	ENSMUST00000025212.8	ENSMUSG00000024354.14	Slc23a1	chr18	protein_coding	solute carrier family 23 (nucleobase transporters), member 1
chr18	35759527	35760155	-	35759546	35760155	A3SS	0.5	50	50	ENSMUST00000025212.8	ENSMUSG00000024354.14	Slc23a1	chr18	protein_coding	solute carrier family 23 (nucleobase transporters), member 1
chr18	35780779	35781312	-	35780779;35780987	35780877;35781312	ES	0.5	50	50	ENSMUST00000025211.6	ENSMUSG00000024353.6	Mzb1	chr18	protein_coding	marginal zone B and B1 cell-specific protein 1
chr18	35781436	35793336	-	35781436	35782213	5pMXE	0.5	50	50	ENSMUST00000025211.6	ENSMUSG00000024353.6	Mzb1	chr18	protein_coding	marginal zone B and B1 cell-specific protein 1
chr18	35793627	35795065	-	35793627;35793910	35793845;35795065	ES	0.33	50	50	ENSMUST00000235292.2	ENSMUSG00000117874.2	Gm50318	chr18	protein_coding	predicted gene, 50318
chr18	35790104	35793336	-	35781436	35793336	A3SS	0.5	50	50	ENSMUST00000235292.2	ENSMUSG00000117874.2	Gm50318	chr18	protein_coding	predicted gene, 50318
chr18	35793397	35793497	-	35793406	35793497	A3SS	0.5	50	50	ENSMUST00000235292.2	ENSMUSG00000117874.2	Gm50318	chr18	protein_coding	predicted gene, 50318
chr18	35793944	35795065	-	35793910	35795065	A3SS	0.33	50	50	ENSMUST00000235292.2	ENSMUSG00000117874.2	Gm50318	chr18	protein_coding	predicted gene, 50318
chr18	35793406	35793550	-	35793406	35793497	A5SS	0.5	50	50	ENSMUST00000235292.2	ENSMUSG00000117874.2	Gm50318	chr18	protein_coding	predicted gene, 50318
chr18	35793627	35795065	-	35793627	35793845	5pMXE	0.5	50	50	ENSMUST00000236539.2	ENSMUSG00000024352.13	Spata24	chr18	protein_coding	spermatogenesis associated 24
chr18	35793627	35795065	-	35793627;35793944	35793845;35795065	ES	0.33	50	50	ENSMUST00000235803.2	ENSMUSG00000024352.13	Spata24	chr18	protein_coding	spermatogenesis associated 24
chr18	35813991	35816271	-	35813991;35815082	35814973;35816271	ES	0.5	50	50	ENSMUST00000025208.7	ENSMUSG00000024350.7	Dnajc18	chr18	protein_coding	DnaJ heat shock protein family (Hsp40) member C18
chr18	35834043;35835558	35835465;35836079	-	35834043	35836079	cassetteExon	0.5	100	100	ENSMUST00000025208.7	ENSMUSG00000024350.7	Dnajc18	chr18	protein_coding	DnaJ heat shock protein family (Hsp40) member C18
chr18	35834043;35835648	35835465;35836079	-	35834043	35836079	cassetteExon	0.5	100	100	ENSMUST00000025208.7	ENSMUSG00000024350.7	Dnajc18	chr18	protein_coding	DnaJ heat shock protein family (Hsp40) member C18
chr18	35835648	35836079	-	35835558	35836079	A3SS	0.33	50	50	ENSMUST00000237995.2	ENSMUSG00000024350.7	Dnajc18	chr18	protein_coding	DnaJ heat shock protein family (Hsp40) member C18
chr18	35860149	35861527	+	35848647	35861527	A5SS	0.5	50	50	ENSMUST00000143778.2	ENSMUSG00000073598.4	1700066B19Rik	chr18	protein_coding	RIKEN cDNA 1700066B19 gene
chr18	35846487	35848232	-	35846487;35846790	35846694;35848232	ES	0.25	50	50	ENSMUST00000097618.10	ENSMUSG00000073599.11	Ecscr	chr18	protein_coding	endothelial cell surface expressed chemotaxis and apoptosis regulator
chr18	35851439	35855297	-	35851439	35854373	5pMXE	0.5	50	50	ENSMUST00000097618.10	ENSMUSG00000073599.11	Ecscr	chr18	protein_coding	endothelial cell surface expressed chemotaxis and apoptosis regulator
chr18	35846790;35847587	35847516;35848232	-	35846790	35848232	cassetteExon	0.5	100	100	ENSMUST00000097618.10	ENSMUSG00000073599.11	Ecscr	chr18	protein_coding	endothelial cell surface expressed chemotaxis and apoptosis regulator
chr18	35850343;35850940	35850625;35851401	-	35850343	35851401	cassetteExon	0.5	100	100	ENSMUST00000097618.10	ENSMUSG00000073599.11	Ecscr	chr18	protein_coding	endothelial cell surface expressed chemotaxis and apoptosis regulator
chr18	35846892	35848232	-	35846790	35848232	A3SS	0.25	50	50	ENSMUST00000097618.10	ENSMUSG00000073599.11	Ecscr	chr18	protein_coding	endothelial cell surface expressed chemotaxis and apoptosis regulator
chr18	35846892	35848232	-	35847587	35848232	A3SS&ES	0.25	50	50	ENSMUST00000235163.2	ENSMUSG00000073599.11	Ecscr	chr18	protein_coding	endothelial cell surface expressed chemotaxis and apoptosis regulator
chr18	35846487;35846892	35846694;35848232	-	35846487	35848232	cassetteExon	0.5	100	100	ENSMUST00000134656.8	ENSMUSG00000073599.11	Ecscr	chr18	protein_coding	endothelial cell surface expressed chemotaxis and apoptosis regulator
chr18	35847587	35848232	-	35846487	35848232	A3SS	0.25	50	50	ENSMUST00000134656.8	ENSMUSG00000073599.11	Ecscr	chr18	protein_coding	endothelial cell surface expressed chemotaxis and apoptosis regulator
chr18	35846487	35848232	-	35846892	35848232	3pMXE	0.25	50	50	ENSMUST00000123973.2	ENSMUSG00000073599.11	Ecscr	chr18	protein_coding	endothelial cell surface expressed chemotaxis and apoptosis regulator
chr18	35850343	35851401	-	35850343	35850625	5pMXE	0.5	50	50	ENSMUST00000124237.2	ENSMUSG00000073599.11	Ecscr	chr18	protein_coding	endothelial cell surface expressed chemotaxis and apoptosis regulator
chr18	35850343	35851401	-	35850940	35851401	3pMXE	0.5	50	50	ENSMUST00000143684.2	ENSMUSG00000073599.11	Ecscr	chr18	protein_coding	endothelial cell surface expressed chemotaxis and apoptosis regulator
chr18	35868342	35871734	-	35868342;35869170	35868932;35871734	ES	0.5	50	50	ENSMUST00000235495.2	ENSMUSG00000024349.11	Sting1	chr18	protein_coding	stimulator of interferon response cGAMP interactor 1
chr18	35872630	35873360	-	35872630;35873067	35872978;35873360	ES	0.33	50	50	ENSMUST00000235495.2	ENSMUSG00000024349.11	Sting1	chr18	protein_coding	stimulator of interferon response cGAMP interactor 1
chr18	35868282	35868932	-	35868342	35868932	A3SS	0.5	50	50	ENSMUST00000235495.2	ENSMUSG00000024349.11	Sting1	chr18	protein_coding	stimulator of interferon response cGAMP interactor 1
chr18	35872273	35872404	-	35872150	35872404	A3SS	0.5	50	50	ENSMUST00000235495.2	ENSMUSG00000024349.11	Sting1	chr18	protein_coding	stimulator of interferon response cGAMP interactor 1
chr18	35873001	35873360	-	35873067	35873360	A3SS	0.33	50	50	ENSMUST00000235495.2	ENSMUSG00000024349.11	Sting1	chr18	protein_coding	stimulator of interferon response cGAMP interactor 1
chr18	35872630;35873001	35872978;35873360	-	35872630	35873360	cassetteExon	0.5	100	100	ENSMUST00000237919.2	ENSMUSG00000024349.11	Sting1	chr18	protein_coding	stimulator of interferon response cGAMP interactor 1
chr18	35872630	35873360	-	35872630	35872978	5pMXE	0.5	50	50	ENSMUST00000237853.2	ENSMUSG00000024349.11	Sting1	chr18	protein_coding	stimulator of interferon response cGAMP interactor 1
chr18	35868342	35871734	-	35869170	35871734	3pMXE	0.5	50	50	ENSMUST00000236926.2	ENSMUSG00000024349.11	Sting1	chr18	protein_coding	stimulator of interferon response cGAMP interactor 1
chr18	35932925	35933163	+	35932925;35933082	35933005;35933163	ES	0.5	50	50	ENSMUST00000170693.9	ENSMUSG00000091896.9	Ube2d2a	chr18	protein_coding	ubiquitin-conjugating enzyme E2D 2A
chr18	35934420	35942261	+	35934420	35938571	3pMXE	0.33	50	50	ENSMUST00000170693.9	ENSMUSG00000091896.9	Ube2d2a	chr18	protein_coding	ubiquitin-conjugating enzyme E2D 2A
chr18	35934420	35991446	+	35934420	35938571	3pMXE	0.33	50	50	ENSMUST00000170693.9	ENSMUSG00000091896.9	Ube2d2a	chr18	protein_coding	ubiquitin-conjugating enzyme E2D 2A
chr18	35933268	35934369	+	35933268	35934327	A3SS	0.5	50	50	ENSMUST00000170693.9	ENSMUSG00000091896.9	Ube2d2a	chr18	protein_coding	ubiquitin-conjugating enzyme E2D 2A
chr18	35926581	35934327	+	35926581	35932894	A3SS	0.5	50	50	ENSMUST00000235351.2	ENSMUSG00000091896.9	Ube2d2a	chr18	protein_coding	ubiquitin-conjugating enzyme E2D 2A
chr18	35926581;35933268	35932894;35934327	+	35926581	35934327	cassetteExon	0.5	100	100	ENSMUST00000237984.2	ENSMUSG00000091896.9	Ube2d2a	chr18	protein_coding	ubiquitin-conjugating enzyme E2D 2A
chr18	35932925	35933163	+	35932925	35933005	A3SS	0.5	50	50	ENSMUST00000235516.2	ENSMUSG00000091896.9	Ube2d2a	chr18	protein_coding	ubiquitin-conjugating enzyme E2D 2A
chr18	35932925	35933163	+	35933082	35933163	5pMXE	0.5	50	50	ENSMUST00000236550.2	ENSMUSG00000091896.9	Ube2d2a	chr18	protein_coding	ubiquitin-conjugating enzyme E2D 2A
chr18	35934420	35991446	+	35934420	35942261	3pMXE	0.33	50	50	ENSMUST00000237482.2	ENSMUSG00000091896.9	Ube2d2a	chr18	protein_coding	ubiquitin-conjugating enzyme E2D 2A
chr18	35962490	35991446	+	35934420	35991446	A5SS	0.14	50	50	ENSMUST00000235919.2	ENSMUSG00000117841.2	Gm50371	chr18	lncRNA	predicted gene, 50371
chr18	35963039	35991446	+	35934420	35991446	A5SS	0.14	50	50	ENSMUST00000235919.2	ENSMUSG00000117841.2	Gm50371	chr18	lncRNA	predicted gene, 50371
chr18	35963292	35991446	+	35934420	35991446	A5SS	0.14	50	50	ENSMUST00000235919.2	ENSMUSG00000117841.2	Gm50371	chr18	lncRNA	predicted gene, 50371
chr18	35963452	35991446	+	35934420	35991446	A5SS	0.14	50	50	ENSMUST00000235919.2	ENSMUSG00000117841.2	Gm50371	chr18	lncRNA	predicted gene, 50371
chr18	35987835	35991446	+	35934420	35991446	A5SS	0.14	50	50	ENSMUST00000235919.2	ENSMUSG00000117841.2	Gm50371	chr18	lncRNA	predicted gene, 50371
chr18	35989454	35991446	+	35934420	35991446	A5SS	0.14	50	50	ENSMUST00000235919.2	ENSMUSG00000117841.2	Gm50371	chr18	lncRNA	predicted gene, 50371
chr18	35963039	35991446	+	35962490	35991446	A5SS	0.14	50	50	ENSMUST00000235161.2	ENSMUSG00000046668.10	Cxxc5	chr18	protein_coding	CXXC finger 5
chr18	35963292	35991446	+	35962490	35991446	A5SS	0.14	50	50	ENSMUST00000235161.2	ENSMUSG00000046668.10	Cxxc5	chr18	protein_coding	CXXC finger 5
chr18	35963452	35991446	+	35962490	35991446	A5SS	0.14	50	50	ENSMUST00000235161.2	ENSMUSG00000046668.10	Cxxc5	chr18	protein_coding	CXXC finger 5
chr18	35987835	35991446	+	35962490	35991446	A5SS	0.14	50	50	ENSMUST00000235161.2	ENSMUSG00000046668.10	Cxxc5	chr18	protein_coding	CXXC finger 5
chr18	35989454	35991446	+	35962490	35991446	A5SS	0.14	50	50	ENSMUST00000235161.2	ENSMUSG00000046668.10	Cxxc5	chr18	protein_coding	CXXC finger 5
chr18	35963292	35991446	+	35963039	35991446	A5SS	0.14	50	50	ENSMUST00000060722.8	ENSMUSG00000046668.10	Cxxc5	chr18	protein_coding	CXXC finger 5
chr18	35963452	35991446	+	35963039	35991446	A5SS	0.14	50	50	ENSMUST00000060722.8	ENSMUSG00000046668.10	Cxxc5	chr18	protein_coding	CXXC finger 5
chr18	35987835	35991446	+	35963039	35991446	A5SS	0.14	50	50	ENSMUST00000060722.8	ENSMUSG00000046668.10	Cxxc5	chr18	protein_coding	CXXC finger 5
chr18	35989454	35991446	+	35963039	35991446	A5SS	0.14	50	50	ENSMUST00000060722.8	ENSMUSG00000046668.10	Cxxc5	chr18	protein_coding	CXXC finger 5
chr18	35963452	35991446	+	35963292	35991446	A5SS	0.14	50	50	ENSMUST00000237291.2	ENSMUSG00000046668.10	Cxxc5	chr18	protein_coding	CXXC finger 5
chr18	35987835	35991446	+	35963292	35991446	A5SS	0.14	50	50	ENSMUST00000237291.2	ENSMUSG00000046668.10	Cxxc5	chr18	protein_coding	CXXC finger 5
chr18	35989454	35991446	+	35963292	35991446	A5SS	0.14	50	50	ENSMUST00000237291.2	ENSMUSG00000046668.10	Cxxc5	chr18	protein_coding	CXXC finger 5
chr18	35987835	35991446	+	35963452	35991446	A5SS	0.14	50	50	ENSMUST00000235169.2	ENSMUSG00000046668.10	Cxxc5	chr18	protein_coding	CXXC finger 5
chr18	35989454	35991446	+	35963452	35991446	A5SS	0.14	50	50	ENSMUST00000235169.2	ENSMUSG00000046668.10	Cxxc5	chr18	protein_coding	CXXC finger 5
chr18	35987835;35989454	35989225;35991446	+	35987835	35991446	cassetteExon	0.5	100	100	ENSMUST00000235337.2	ENSMUSG00000046668.10	Cxxc5	chr18	protein_coding	CXXC finger 5
chr18	36098272	36111334	+	36098272	36111337	A3SS	0.5	50	50	ENSMUST00000115716.9	ENSMUSG00000024347.17	Psd2	chr18	protein_coding	pleckstrin and Sec7 domain containing 2
chr18	36139200	36139694	+	36139200	36139614	A3SS	0.5	50	50	ENSMUST00000115716.9	ENSMUSG00000024347.17	Psd2	chr18	protein_coding	pleckstrin and Sec7 domain containing 2
chr18	36121294	36135977	+	36121291	36135977	A5SS	0.5	50	50	ENSMUST00000115716.9	ENSMUSG00000024347.17	Psd2	chr18	protein_coding	pleckstrin and Sec7 domain containing 2
chr18	36138953	36139130	+	36138962	36139130	A5SS	0.5	50	50	ENSMUST00000115716.9	ENSMUSG00000024347.17	Psd2	chr18	protein_coding	pleckstrin and Sec7 domain containing 2
chr18	36157461	36171284	-	36157461;36165465	36165389;36171284	ES	0.33	50	50	ENSMUST00000115713.9	ENSMUSG00000060275.15	Nrg2	chr18	protein_coding	neuregulin 2
chr18	36171404	36185833	-	36171404;36179029	36178911;36185833	ES	0.5	50	50	ENSMUST00000115713.9	ENSMUSG00000060275.15	Nrg2	chr18	protein_coding	neuregulin 2
chr18	36157461;36164994	36164936;36165389	-	36157461	36165389	cassetteExon	0.5	100	100	ENSMUST00000115713.9	ENSMUSG00000060275.15	Nrg2	chr18	protein_coding	neuregulin 2
chr18	36157461;36164994	36164936;36171284	-	36157461;36165465	36165389;36171284	MXE	0.5	100	100	ENSMUST00000115713.9	ENSMUSG00000060275.15	Nrg2	chr18	protein_coding	neuregulin 2
chr18	36157461	36160446	-	36157461	36165389	A5SS	0.25	50	50	ENSMUST00000115713.9	ENSMUSG00000060275.15	Nrg2	chr18	protein_coding	neuregulin 2
chr18	36186004	36201503	-	36186004	36329481	A5SS	0.5	50	50	ENSMUST00000115713.9	ENSMUSG00000060275.15	Nrg2	chr18	protein_coding	neuregulin 2
chr18	36157461	36165389	-	36157461	36164936	5pMXE	0.25	50	50	ENSMUST00000115712.10	ENSMUSG00000060275.15	Nrg2	chr18	protein_coding	neuregulin 2
chr18	36157461	36171284	-	36157461	36164936	5pMXE	0.25	50	50	ENSMUST00000115712.10	ENSMUSG00000060275.15	Nrg2	chr18	protein_coding	neuregulin 2
chr18	36157461;36160469	36160446;36164936	-	36157461	36164936	cassetteExon	0.5	100	100	ENSMUST00000115712.10	ENSMUSG00000060275.15	Nrg2	chr18	protein_coding	neuregulin 2
chr18	36157461;36164994	36164936;36171284	-	36157461	36171284	cassetteExon	0.5	100	100	ENSMUST00000237681.2	ENSMUSG00000060275.15	Nrg2	chr18	protein_coding	neuregulin 2
chr18	36157461	36160446	-	36157461	36171284	A5SS	0.25	50	50	ENSMUST00000237681.2	ENSMUSG00000060275.15	Nrg2	chr18	protein_coding	neuregulin 2
chr18	36171404	36185833	-	36171404	36178911	5pMXE	0.5	50	50	ENSMUST00000225173.3	ENSMUSG00000060275.15	Nrg2	chr18	protein_coding	neuregulin 2
chr18	36157461;36165465	36165389;36171284	-	36157461;36164994	36160446;36171284	MXE	0.5	100	100	ENSMUST00000225173.3	ENSMUSG00000060275.15	Nrg2	chr18	protein_coding	neuregulin 2
chr18	36164994;36165465	36165389;36171284	-	36164994	36171284	cassetteExon	0.5	100	100	ENSMUST00000225173.3	ENSMUSG00000060275.15	Nrg2	chr18	protein_coding	neuregulin 2
chr18	36157461	36164936	-	36160469	36164936	3pMXE	0.5	50	50	ENSMUST00000115705.2	ENSMUSG00000060275.15	Nrg2	chr18	protein_coding	neuregulin 2
chr18	36475800	36478676	+	36475800;36478019	36477849;36478676	ES	0.33	50	50	ENSMUST00000139727.3	ENSMUSG00000046727.14	Cystm1	chr18	protein_coding	cysteine-rich transmembrane module containing 1
chr18	36499794	36533362	+	36499794	36526249	3pMXE	0.33	50	50	ENSMUST00000139727.3	ENSMUSG00000046727.14	Cystm1	chr18	protein_coding	cysteine-rich transmembrane module containing 1
chr18	36499794	36535550	+	36499794	36526249	3pMXE	0.33	50	50	ENSMUST00000139727.3	ENSMUSG00000046727.14	Cystm1	chr18	protein_coding	cysteine-rich transmembrane module containing 1
chr18	36476277	36477849	+	36475800	36477849	A5SS	0.5	50	50	ENSMUST00000139727.3	ENSMUSG00000046727.14	Cystm1	chr18	protein_coding	cysteine-rich transmembrane module containing 1
chr18	36476277	36478676	+	36478019	36478676	A5SS&ES	0.33	50	50	ENSMUST00000139727.3	ENSMUSG00000046727.14	Cystm1	chr18	protein_coding	cysteine-rich transmembrane module containing 1
chr18	36481869	36499568	+	36478893	36499568	A5SS	0.25	50	50	ENSMUST00000139727.3	ENSMUSG00000046727.14	Cystm1	chr18	protein_coding	cysteine-rich transmembrane module containing 1
chr18	36483861	36499568	+	36478893	36499568	A5SS	0.25	50	50	ENSMUST00000139727.3	ENSMUSG00000046727.14	Cystm1	chr18	protein_coding	cysteine-rich transmembrane module containing 1
chr18	36498931	36499568	+	36478893	36499568	A5SS	0.25	50	50	ENSMUST00000139727.3	ENSMUSG00000046727.14	Cystm1	chr18	protein_coding	cysteine-rich transmembrane module containing 1
chr18	36499794;36533473	36533362;36535550	+	36499794	36535550	cassetteExon	0.5	100	100	ENSMUST00000237375.2	ENSMUSG00000046727.14	Cystm1	chr18	protein_coding	cysteine-rich transmembrane module containing 1
chr18	36476277	36478676	+	36475800	36478676	A5SS	0.33	50	50	ENSMUST00000235403.2	ENSMUSG00000046727.14	Cystm1	chr18	protein_coding	cysteine-rich transmembrane module containing 1
chr18	36476277;36478019	36477849;36478676	+	36476277	36478676	cassetteExon	0.5	100	100	ENSMUST00000236593.2	ENSMUSG00000046727.14	Cystm1	chr18	protein_coding	cysteine-rich transmembrane module containing 1
chr18	36475800	36478676	+	36478019	36478676	5pMXE	0.33	50	50	ENSMUST00000236024.2	ENSMUSG00000046727.14	Cystm1	chr18	protein_coding	cysteine-rich transmembrane module containing 1
chr18	36481869	36499568	+	36481869;36483861	36483747;36499568	ES	0.33	50	50	ENSMUST00000235864.2	ENSMUSG00000046727.14	Cystm1	chr18	protein_coding	cysteine-rich transmembrane module containing 1
chr18	36498931	36499568	+	36483861	36499568	A5SS	0.33	50	50	ENSMUST00000235864.2	ENSMUSG00000046727.14	Cystm1	chr18	protein_coding	cysteine-rich transmembrane module containing 1
chr18	36498931	36499568	+	36481869	36499568	A5SS	0.25	50	50	ENSMUST00000050584.10	ENSMUSG00000046727.14	Cystm1	chr18	protein_coding	cysteine-rich transmembrane module containing 1
chr18	36537513	36584133	-	36537513;36565443	36565359;36584133	ES	0.5	50	50	ENSMUST00000025204.7	ENSMUSG00000024346.7	Pfdn1	chr18	protein_coding	prefoldin 1
chr18	36565443	36584154	-	36565443	36584133	A5SS	0.5	50	50	ENSMUST00000025204.7	ENSMUSG00000024346.7	Pfdn1	chr18	protein_coding	prefoldin 1
chr18	36537513	36584133	-	36537513	36565359	A5SS&ES	0.5	50	50	ENSMUST00000237499.2	ENSMUSG00000024346.7	Pfdn1	chr18	protein_coding	prefoldin 1
chr18	36664579	36665023	+	36664579;36664864	36664731;36665023	ES	0.5	50	50	ENSMUST00000237243.2	ENSMUSG00000024485.17	Slc4a9	chr18	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 9
chr18	36666296	36666627	+	36666296	36666630	A3SS	0.5	50	50	ENSMUST00000237243.2	ENSMUSG00000024485.17	Slc4a9	chr18	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 9
chr18	36669972	36673789	+	36669972;36672830	36672657;36673789	ES	0.5	50	50	ENSMUST00000237174.2	ENSMUSG00000024485.17	Slc4a9	chr18	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 9
chr18	36674344	36689051	+	36674344	36677434	3pMXE	0.5	50	50	ENSMUST00000237174.2	ENSMUSG00000024485.17	Slc4a9	chr18	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 9
chr18	36669972;36672431	36672363;36672657	+	36669972	36672657	cassetteExon	0.5	100	100	ENSMUST00000237174.2	ENSMUSG00000024485.17	Slc4a9	chr18	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 9
chr18	36664269	36664487	+	36664269	36664405	A3SS	0.5	50	50	ENSMUST00000237174.2	ENSMUSG00000024485.17	Slc4a9	chr18	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 9
chr18	36668496	36668579	+	36668496	36668576	A3SS	0.5	50	50	ENSMUST00000237174.2	ENSMUSG00000024485.17	Slc4a9	chr18	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 9
chr18	36668652	36669900	+	36668754	36669900	A5SS	0.5	50	50	ENSMUST00000237174.2	ENSMUSG00000024485.17	Slc4a9	chr18	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 9
chr18	36674712	36677434	+	36674344	36677434	A5SS	0.5	50	50	ENSMUST00000237174.2	ENSMUSG00000024485.17	Slc4a9	chr18	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 9
chr18	36669972;36672830	36672363;36673789	+	36669972	36673789	cassetteExon	0.5	100	100	ENSMUST00000236779.2	ENSMUSG00000024485.17	Slc4a9	chr18	protein_coding	solute carrier family 4, sodium bicarbonate cotransporter, member 9
chr18	36694108	36708072	+	36693154	36708072	A5SS	0.5	50	50	ENSMUST00000134146.8	ENSMUSG00000024483.20	Ankhd1	chr18	protein_coding	ankyrin repeat and KH domain containing 1
chr18	36747870	36765120	+	36747870;36758320	36757562;36765120	ES	0.5	50	50	ENSMUST00000006205.14	ENSMUSG00000024483.20	Ankhd1	chr18	protein_coding	ankyrin repeat and KH domain containing 1
chr18	36791191	36794050	+	36791191	36791453	3pMXE	0.5	50	50	ENSMUST00000006205.14	ENSMUSG00000024483.20	Ankhd1	chr18	protein_coding	ankyrin repeat and KH domain containing 1
chr18	36773413;36774531	36774452;36774630	+	36773413	36774630	cassetteExon	0.5	100	100	ENSMUST00000006205.14	ENSMUSG00000024483.20	Ankhd1	chr18	protein_coding	ankyrin repeat and KH domain containing 1
chr18	36773413;36774558	36774452;36774630	+	36773413	36774630	cassetteExon	0.5	100	100	ENSMUST00000006205.14	ENSMUSG00000024483.20	Ankhd1	chr18	protein_coding	ankyrin repeat and KH domain containing 1
chr18	36747029	36747816	+	36747029	36747768	A3SS	0.5	50	50	ENSMUST00000006205.14	ENSMUSG00000024483.20	Ankhd1	chr18	protein_coding	ankyrin repeat and KH domain containing 1
chr18	36787319	36788476	+	36787319	36788527	A3SS	0.5	50	50	ENSMUST00000006205.14	ENSMUSG00000024483.20	Ankhd1	chr18	protein_coding	ankyrin repeat and KH domain containing 1
chr18	36788730	36789772	+	36788730	36789739	A3SS	0.5	50	50	ENSMUST00000006205.14	ENSMUSG00000024483.20	Ankhd1	chr18	protein_coding	ankyrin repeat and KH domain containing 1
chr18	36739268	36744853	+	36733928	36744853	A5SS	0.5	50	50	ENSMUST00000006205.14	ENSMUSG00000024483.20	Ankhd1	chr18	protein_coding	ankyrin repeat and KH domain containing 1
chr18	36789887	36791027	+	36789915	36791027	A5SS	0.5	50	50	ENSMUST00000006205.14	ENSMUSG00000024483.20	Ankhd1	chr18	protein_coding	ankyrin repeat and KH domain containing 1
chr18	36747870	36765120	+	36747870	36757562	3pMXE	0.5	50	50	ENSMUST00000152060.8	ENSMUSG00000024483.20	Ankhd1	chr18	protein_coding	ankyrin repeat and KH domain containing 1
chr18	36758320	36765120	+	36747870	36765120	A5SS	0.5	50	50	ENSMUST00000142780.2	ENSMUSG00000024483.20	Ankhd1	chr18	protein_coding	ankyrin repeat and KH domain containing 1
chr18	36774531	36774630	+	36774558	36774630	A5SS	0.33	50	50	ENSMUST00000130035.8	ENSMUSG00000024483.20	Ankhd1	chr18	protein_coding	ankyrin repeat and KH domain containing 1
chr18	36797355	36798335	+	36794159	36798335	A5SS	0.5	50	50	ENSMUST00000140061.8	ENSMUSG00000117942.2	Maskbp3	chr18	protein_coding	multiple ankyrin repeats single KH domain binding protein 3
chr18	36801901	36803301	-	36801901;36803182	36803057;36803301	ES	0.5	50	50	ENSMUST00000173875.9	ENSMUSG00000006050.13	Sra1	chr18	protein_coding	steroid receptor RNA activator 1
chr18	36800946	36801705	-	36800952	36801705	A3SS	0.5	50	50	ENSMUST00000173875.9	ENSMUSG00000006050.13	Sra1	chr18	protein_coding	steroid receptor RNA activator 1
chr18	36803182	36803315	-	36803182	36803301	A5SS	0.5	50	50	ENSMUST00000173875.9	ENSMUSG00000006050.13	Sra1	chr18	protein_coding	steroid receptor RNA activator 1
chr18	36801901	36803301	-	36801901	36803057	A5SS&ES	0.5	50	50	ENSMUST00000173482.8	ENSMUSG00000006050.13	Sra1	chr18	protein_coding	steroid receptor RNA activator 1
chr18	36801901	36803301	-	36803182	36803301	3pMXE	0.5	50	50	ENSMUST00000174125.2	ENSMUSG00000006050.13	Sra1	chr18	protein_coding	steroid receptor RNA activator 1
chr18	36808449	36809224	-	36808449;36808799	36808716;36809224	ES	0.5	50	50	ENSMUST00000001415.9	ENSMUSG00000117679.2	Apbb3	chr18	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 3
chr18	36808577	36808716	-	36808449	36808716	A3SS	0.5	50	50	ENSMUST00000001415.9	ENSMUSG00000117679.2	Apbb3	chr18	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 3
chr18	36810048	36810163	-	36810045	36810163	A3SS	0.5	50	50	ENSMUST00000001415.9	ENSMUSG00000117679.2	Apbb3	chr18	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 3
chr18	36810299	36810498	-	36810309	36810498	A3SS	0.5	50	50	ENSMUST00000001415.9	ENSMUSG00000117679.2	Apbb3	chr18	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 3
chr18	36808194	36808450	-	36808194	36808334	A5SS	0.5	50	50	ENSMUST00000235552.2	ENSMUSG00000117679.2	Apbb3	chr18	protein_coding	amyloid beta (A4) precursor protein-binding, family B, member 3
chr18	36812676	36813481	+	36812676	36813569	A3SS	0.5	50	50	ENSMUST00000186538.7	ENSMUSG00000033272.13	Slc35a4	chr18	protein_coding	solute carrier family 35, member A4
chr18	36870625	36870722	+	36870632	36870722	A5SS	0.5	50	50	ENSMUST00000237727.2	ENSMUSG00000006850.9	Tmco6	chr18	protein_coding	transmembrane and coiled-coil domains 6
chr18	36877841	36880401	+	36877841;36878730	36878664;36880401	ES	0.5	50	50	ENSMUST00000007042.6	ENSMUSG00000024474.8	Ik	chr18	protein_coding	IK cytokine
chr18	36887684	36888479	+	36887684	36888478	A3SS	0.5	50	50	ENSMUST00000007042.6	ENSMUSG00000024474.8	Ik	chr18	protein_coding	IK cytokine
chr18	36895820	36895902	+	36895810	36895902	A5SS	0.5	50	50	ENSMUST00000049323.9	ENSMUSG00000042660.9	Wdr55	chr18	protein_coding	WD repeat domain 55
chr18	36906668;36907385	36907215;36909230	-	36906668	36909230	cassetteExon	0.5	100	100	ENSMUST00000001416.8	ENSMUSG00000001380.8	Hars	chr18	protein_coding	histidyl-tRNA synthetase
chr18	36923303	36923522	+	36919224	36923522	A5SS	0.5	50	50	ENSMUST00000134122.8	ENSMUSG00000019143.16	Hars2	chr18	protein_coding	histidyl-tRNA synthetase 2
chr18	36922337	36923187	+	36922337;36922662	36922420;36923187	ES	0.33	50	50	ENSMUST00000152954.8	ENSMUSG00000019143.16	Hars2	chr18	protein_coding	histidyl-tRNA synthetase 2
chr18	36921723	36923187	+	36921723;36922337	36922210;36923187	ES	0.33	50	50	ENSMUST00000019287.9	ENSMUSG00000019143.16	Hars2	chr18	protein_coding	histidyl-tRNA synthetase 2
chr18	36921723;36922662	36922210;36923187	+	36921723	36923187	cassetteExon	0.5	100	100	ENSMUST00000155842.2	ENSMUSG00000019143.16	Hars2	chr18	protein_coding	histidyl-tRNA synthetase 2
chr18	37074758	37289208	+	37065725	37289208	A5SS	0.06	50	50	ENSMUST00000193839.6	ENSMUSG00000103442.6	Pcdha1	chr18	protein_coding	protocadherin alpha 1
chr18	37081629	37289208	+	37065725	37289208	A5SS	0.06	50	50	ENSMUST00000193839.6	ENSMUSG00000103442.6	Pcdha1	chr18	protein_coding	protocadherin alpha 1
chr18	37087420	37289208	+	37065725	37289208	A5SS	0.06	50	50	ENSMUST00000193839.6	ENSMUSG00000103442.6	Pcdha1	chr18	protein_coding	protocadherin alpha 1
chr18	37088203	37289208	+	37065725	37289208	A5SS	0.06	50	50	ENSMUST00000193839.6	ENSMUSG00000103442.6	Pcdha1	chr18	protein_coding	protocadherin alpha 1
chr18	37095838	37289208	+	37065725	37289208	A5SS	0.06	50	50	ENSMUST00000193839.6	ENSMUSG00000103442.6	Pcdha1	chr18	protein_coding	protocadherin alpha 1
chr18	37103190	37289208	+	37065725	37289208	A5SS	0.06	50	50	ENSMUST00000193839.6	ENSMUSG00000103442.6	Pcdha1	chr18	protein_coding	protocadherin alpha 1
chr18	37109331	37289208	+	37065725	37289208	A5SS	0.06	50	50	ENSMUST00000193839.6	ENSMUSG00000103442.6	Pcdha1	chr18	protein_coding	protocadherin alpha 1
chr18	37127901	37289208	+	37065725	37289208	A5SS	0.06	50	50	ENSMUST00000193839.6	ENSMUSG00000103442.6	Pcdha1	chr18	protein_coding	protocadherin alpha 1
chr18	37133413	37289208	+	37065725	37289208	A5SS	0.06	50	50	ENSMUST00000193839.6	ENSMUSG00000103442.6	Pcdha1	chr18	protein_coding	protocadherin alpha 1
chr18	37140754	37289208	+	37065725	37289208	A5SS	0.06	50	50	ENSMUST00000193839.6	ENSMUSG00000103442.6	Pcdha1	chr18	protein_coding	protocadherin alpha 1
chr18	37145509	37289208	+	37065725	37289208	A5SS	0.06	50	50	ENSMUST00000193839.6	ENSMUSG00000103442.6	Pcdha1	chr18	protein_coding	protocadherin alpha 1
chr18	37146304	37289208	+	37065725	37289208	A5SS	0.06	50	50	ENSMUST00000193839.6	ENSMUSG00000103442.6	Pcdha1	chr18	protein_coding	protocadherin alpha 1
chr18	37155676	37289208	+	37065725	37289208	A5SS	0.06	50	50	ENSMUST00000193839.6	ENSMUSG00000103442.6	Pcdha1	chr18	protein_coding	protocadherin alpha 1
chr18	37225624	37289208	+	37065725	37289208	A5SS	0.06	50	50	ENSMUST00000193839.6	ENSMUSG00000103442.6	Pcdha1	chr18	protein_coding	protocadherin alpha 1
chr18	37279583	37289208	+	37065725	37289208	A5SS	0.06	50	50	ENSMUST00000193839.6	ENSMUSG00000103442.6	Pcdha1	chr18	protein_coding	protocadherin alpha 1
chr18	37081629	37289208	+	37074758	37289208	A5SS	0.06	50	50	ENSMUST00000115662.9	ENSMUSG00000104148.6	Pcdha2	chr18	protein_coding	protocadherin alpha 2
chr18	37087420	37289208	+	37074758	37289208	A5SS	0.06	50	50	ENSMUST00000115662.9	ENSMUSG00000104148.6	Pcdha2	chr18	protein_coding	protocadherin alpha 2
chr18	37088203	37289208	+	37074758	37289208	A5SS	0.06	50	50	ENSMUST00000115662.9	ENSMUSG00000104148.6	Pcdha2	chr18	protein_coding	protocadherin alpha 2
chr18	37095838	37289208	+	37074758	37289208	A5SS	0.06	50	50	ENSMUST00000115662.9	ENSMUSG00000104148.6	Pcdha2	chr18	protein_coding	protocadherin alpha 2
chr18	37103190	37289208	+	37074758	37289208	A5SS	0.06	50	50	ENSMUST00000115662.9	ENSMUSG00000104148.6	Pcdha2	chr18	protein_coding	protocadherin alpha 2
chr18	37109331	37289208	+	37074758	37289208	A5SS	0.06	50	50	ENSMUST00000115662.9	ENSMUSG00000104148.6	Pcdha2	chr18	protein_coding	protocadherin alpha 2
chr18	37127901	37289208	+	37074758	37289208	A5SS	0.06	50	50	ENSMUST00000115662.9	ENSMUSG00000104148.6	Pcdha2	chr18	protein_coding	protocadherin alpha 2
chr18	37133413	37289208	+	37074758	37289208	A5SS	0.06	50	50	ENSMUST00000115662.9	ENSMUSG00000104148.6	Pcdha2	chr18	protein_coding	protocadherin alpha 2
chr18	37140754	37289208	+	37074758	37289208	A5SS	0.06	50	50	ENSMUST00000115662.9	ENSMUSG00000104148.6	Pcdha2	chr18	protein_coding	protocadherin alpha 2
chr18	37145509	37289208	+	37074758	37289208	A5SS	0.06	50	50	ENSMUST00000115662.9	ENSMUSG00000104148.6	Pcdha2	chr18	protein_coding	protocadherin alpha 2
chr18	37146304	37289208	+	37074758	37289208	A5SS	0.06	50	50	ENSMUST00000115662.9	ENSMUSG00000104148.6	Pcdha2	chr18	protein_coding	protocadherin alpha 2
chr18	37155676	37289208	+	37074758	37289208	A5SS	0.06	50	50	ENSMUST00000115662.9	ENSMUSG00000104148.6	Pcdha2	chr18	protein_coding	protocadherin alpha 2
chr18	37225624	37289208	+	37074758	37289208	A5SS	0.06	50	50	ENSMUST00000115662.9	ENSMUSG00000104148.6	Pcdha2	chr18	protein_coding	protocadherin alpha 2
chr18	37279583	37289208	+	37074758	37289208	A5SS	0.06	50	50	ENSMUST00000115662.9	ENSMUSG00000104148.6	Pcdha2	chr18	protein_coding	protocadherin alpha 2
chr18	37087420	37289208	+	37081629	37289208	A5SS	0.06	50	50	ENSMUST00000192503.2	ENSMUSG00000102312.2	Pcdha3	chr18	protein_coding	protocadherin alpha 3
chr18	37088203	37289208	+	37081629	37289208	A5SS	0.06	50	50	ENSMUST00000192503.2	ENSMUSG00000102312.2	Pcdha3	chr18	protein_coding	protocadherin alpha 3
chr18	37095838	37289208	+	37081629	37289208	A5SS	0.06	50	50	ENSMUST00000192503.2	ENSMUSG00000102312.2	Pcdha3	chr18	protein_coding	protocadherin alpha 3
chr18	37103190	37289208	+	37081629	37289208	A5SS	0.06	50	50	ENSMUST00000192503.2	ENSMUSG00000102312.2	Pcdha3	chr18	protein_coding	protocadherin alpha 3
chr18	37109331	37289208	+	37081629	37289208	A5SS	0.06	50	50	ENSMUST00000192503.2	ENSMUSG00000102312.2	Pcdha3	chr18	protein_coding	protocadherin alpha 3
chr18	37127901	37289208	+	37081629	37289208	A5SS	0.06	50	50	ENSMUST00000192503.2	ENSMUSG00000102312.2	Pcdha3	chr18	protein_coding	protocadherin alpha 3
chr18	37133413	37289208	+	37081629	37289208	A5SS	0.06	50	50	ENSMUST00000192503.2	ENSMUSG00000102312.2	Pcdha3	chr18	protein_coding	protocadherin alpha 3
chr18	37140754	37289208	+	37081629	37289208	A5SS	0.06	50	50	ENSMUST00000192503.2	ENSMUSG00000102312.2	Pcdha3	chr18	protein_coding	protocadherin alpha 3
chr18	37145509	37289208	+	37081629	37289208	A5SS	0.06	50	50	ENSMUST00000192503.2	ENSMUSG00000102312.2	Pcdha3	chr18	protein_coding	protocadherin alpha 3
chr18	37146304	37289208	+	37081629	37289208	A5SS	0.06	50	50	ENSMUST00000192503.2	ENSMUSG00000102312.2	Pcdha3	chr18	protein_coding	protocadherin alpha 3
chr18	37155676	37289208	+	37081629	37289208	A5SS	0.06	50	50	ENSMUST00000192503.2	ENSMUSG00000102312.2	Pcdha3	chr18	protein_coding	protocadherin alpha 3
chr18	37225624	37289208	+	37081629	37289208	A5SS	0.06	50	50	ENSMUST00000192503.2	ENSMUSG00000102312.2	Pcdha3	chr18	protein_coding	protocadherin alpha 3
chr18	37279583	37289208	+	37081629	37289208	A5SS	0.06	50	50	ENSMUST00000192503.2	ENSMUSG00000102312.2	Pcdha3	chr18	protein_coding	protocadherin alpha 3
chr18	37087420	37289208	+	37088203	37289208	A5SS	0.06	50	50	ENSMUST00000192512.6	ENSMUSG00000104252.6	Pcdha4	chr18	protein_coding	protocadherin alpha 4
chr18	37095838	37289208	+	37088203	37289208	A5SS	0.06	50	50	ENSMUST00000192512.6	ENSMUSG00000104252.6	Pcdha4	chr18	protein_coding	protocadherin alpha 4
chr18	37103190	37289208	+	37088203	37289208	A5SS	0.06	50	50	ENSMUST00000192512.6	ENSMUSG00000104252.6	Pcdha4	chr18	protein_coding	protocadherin alpha 4
chr18	37109331	37289208	+	37088203	37289208	A5SS	0.06	50	50	ENSMUST00000192512.6	ENSMUSG00000104252.6	Pcdha4	chr18	protein_coding	protocadherin alpha 4
chr18	37127901	37289208	+	37088203	37289208	A5SS	0.06	50	50	ENSMUST00000192512.6	ENSMUSG00000104252.6	Pcdha4	chr18	protein_coding	protocadherin alpha 4
chr18	37133413	37289208	+	37088203	37289208	A5SS	0.06	50	50	ENSMUST00000192512.6	ENSMUSG00000104252.6	Pcdha4	chr18	protein_coding	protocadherin alpha 4
chr18	37140754	37289208	+	37088203	37289208	A5SS	0.06	50	50	ENSMUST00000192512.6	ENSMUSG00000104252.6	Pcdha4	chr18	protein_coding	protocadherin alpha 4
chr18	37145509	37289208	+	37088203	37289208	A5SS	0.06	50	50	ENSMUST00000192512.6	ENSMUSG00000104252.6	Pcdha4	chr18	protein_coding	protocadherin alpha 4
chr18	37146304	37289208	+	37088203	37289208	A5SS	0.06	50	50	ENSMUST00000192512.6	ENSMUSG00000104252.6	Pcdha4	chr18	protein_coding	protocadherin alpha 4
chr18	37155676	37289208	+	37088203	37289208	A5SS	0.06	50	50	ENSMUST00000192512.6	ENSMUSG00000104252.6	Pcdha4	chr18	protein_coding	protocadherin alpha 4
chr18	37225624	37289208	+	37088203	37289208	A5SS	0.06	50	50	ENSMUST00000192512.6	ENSMUSG00000104252.6	Pcdha4	chr18	protein_coding	protocadherin alpha 4
chr18	37279583	37289208	+	37088203	37289208	A5SS	0.06	50	50	ENSMUST00000192512.6	ENSMUSG00000104252.6	Pcdha4	chr18	protein_coding	protocadherin alpha 4
chr18	37095838	37289208	+	37087420	37289208	A5SS	0.06	50	50	ENSMUST00000192295.2	ENSMUSG00000104252.6	Pcdha4	chr18	protein_coding	protocadherin alpha 4
chr18	37103190	37289208	+	37087420	37289208	A5SS	0.06	50	50	ENSMUST00000192295.2	ENSMUSG00000104252.6	Pcdha4	chr18	protein_coding	protocadherin alpha 4
chr18	37109331	37289208	+	37087420	37289208	A5SS	0.06	50	50	ENSMUST00000192295.2	ENSMUSG00000104252.6	Pcdha4	chr18	protein_coding	protocadherin alpha 4
chr18	37127901	37289208	+	37087420	37289208	A5SS	0.06	50	50	ENSMUST00000192295.2	ENSMUSG00000104252.6	Pcdha4	chr18	protein_coding	protocadherin alpha 4
chr18	37133413	37289208	+	37087420	37289208	A5SS	0.06	50	50	ENSMUST00000192295.2	ENSMUSG00000104252.6	Pcdha4	chr18	protein_coding	protocadherin alpha 4
chr18	37140754	37289208	+	37087420	37289208	A5SS	0.06	50	50	ENSMUST00000192295.2	ENSMUSG00000104252.6	Pcdha4	chr18	protein_coding	protocadherin alpha 4
chr18	37145509	37289208	+	37087420	37289208	A5SS	0.06	50	50	ENSMUST00000192295.2	ENSMUSG00000104252.6	Pcdha4	chr18	protein_coding	protocadherin alpha 4
chr18	37146304	37289208	+	37087420	37289208	A5SS	0.06	50	50	ENSMUST00000192295.2	ENSMUSG00000104252.6	Pcdha4	chr18	protein_coding	protocadherin alpha 4
chr18	37155676	37289208	+	37087420	37289208	A5SS	0.06	50	50	ENSMUST00000192295.2	ENSMUSG00000104252.6	Pcdha4	chr18	protein_coding	protocadherin alpha 4
chr18	37225624	37289208	+	37087420	37289208	A5SS	0.06	50	50	ENSMUST00000192295.2	ENSMUSG00000104252.6	Pcdha4	chr18	protein_coding	protocadherin alpha 4
chr18	37279583	37289208	+	37087420	37289208	A5SS	0.06	50	50	ENSMUST00000192295.2	ENSMUSG00000104252.6	Pcdha4	chr18	protein_coding	protocadherin alpha 4
chr18	37088203	37289208	+	37088203	37958074	A3SS	0.5	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37103190	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37109331	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37797418	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37804578	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37809960	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37815892	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37820870	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37825422	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37829977	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37842705	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37850427	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37855970	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37861369	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37866612	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37872596	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37877711	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37882658	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37887246	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37891420	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37897352	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37901593	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37942030	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37948606	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37951036	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37952751	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37952765	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37955187	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37957247	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37957478	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37957609	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37957717	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37957905	37958074	+	37088203	37958074	A5SS	0.03	50	50	ENSMUST00000115661.5	ENSMUSG00000103458.2	Gm42416	chr18	protein_coding	predicted gene, 42416
chr18	37103190	37289208	+	37095838	37289208	A5SS	0.06	50	50	ENSMUST00000192168.2	ENSMUSG00000103092.2	Pcdha5	chr18	protein_coding	protocadherin alpha 5
chr18	37109331	37289208	+	37095838	37289208	A5SS	0.06	50	50	ENSMUST00000192168.2	ENSMUSG00000103092.2	Pcdha5	chr18	protein_coding	protocadherin alpha 5
chr18	37127901	37289208	+	37095838	37289208	A5SS	0.06	50	50	ENSMUST00000192168.2	ENSMUSG00000103092.2	Pcdha5	chr18	protein_coding	protocadherin alpha 5
chr18	37133413	37289208	+	37095838	37289208	A5SS	0.06	50	50	ENSMUST00000192168.2	ENSMUSG00000103092.2	Pcdha5	chr18	protein_coding	protocadherin alpha 5
chr18	37140754	37289208	+	37095838	37289208	A5SS	0.06	50	50	ENSMUST00000192168.2	ENSMUSG00000103092.2	Pcdha5	chr18	protein_coding	protocadherin alpha 5
chr18	37145509	37289208	+	37095838	37289208	A5SS	0.06	50	50	ENSMUST00000192168.2	ENSMUSG00000103092.2	Pcdha5	chr18	protein_coding	protocadherin alpha 5
chr18	37146304	37289208	+	37095838	37289208	A5SS	0.06	50	50	ENSMUST00000192168.2	ENSMUSG00000103092.2	Pcdha5	chr18	protein_coding	protocadherin alpha 5
chr18	37155676	37289208	+	37095838	37289208	A5SS	0.06	50	50	ENSMUST00000192168.2	ENSMUSG00000103092.2	Pcdha5	chr18	protein_coding	protocadherin alpha 5
chr18	37225624	37289208	+	37095838	37289208	A5SS	0.06	50	50	ENSMUST00000192168.2	ENSMUSG00000103092.2	Pcdha5	chr18	protein_coding	protocadherin alpha 5
chr18	37279583	37289208	+	37095838	37289208	A5SS	0.06	50	50	ENSMUST00000192168.2	ENSMUSG00000103092.2	Pcdha5	chr18	protein_coding	protocadherin alpha 5
chr18	37109331	37289208	+	37103190	37289208	A5SS	0.06	50	50	ENSMUST00000193777.6	ENSMUSG00000103707.6	Pcdha6	chr18	protein_coding	protocadherin alpha 6
chr18	37127901	37289208	+	37103190	37289208	A5SS	0.06	50	50	ENSMUST00000193777.6	ENSMUSG00000103707.6	Pcdha6	chr18	protein_coding	protocadherin alpha 6
chr18	37133413	37289208	+	37103190	37289208	A5SS	0.06	50	50	ENSMUST00000193777.6	ENSMUSG00000103707.6	Pcdha6	chr18	protein_coding	protocadherin alpha 6
chr18	37140754	37289208	+	37103190	37289208	A5SS	0.06	50	50	ENSMUST00000193777.6	ENSMUSG00000103707.6	Pcdha6	chr18	protein_coding	protocadherin alpha 6
chr18	37145509	37289208	+	37103190	37289208	A5SS	0.06	50	50	ENSMUST00000193777.6	ENSMUSG00000103707.6	Pcdha6	chr18	protein_coding	protocadherin alpha 6
chr18	37146304	37289208	+	37103190	37289208	A5SS	0.06	50	50	ENSMUST00000193777.6	ENSMUSG00000103707.6	Pcdha6	chr18	protein_coding	protocadherin alpha 6
chr18	37155676	37289208	+	37103190	37289208	A5SS	0.06	50	50	ENSMUST00000193777.6	ENSMUSG00000103707.6	Pcdha6	chr18	protein_coding	protocadherin alpha 6
chr18	37225624	37289208	+	37103190	37289208	A5SS	0.06	50	50	ENSMUST00000193777.6	ENSMUSG00000103707.6	Pcdha6	chr18	protein_coding	protocadherin alpha 6
chr18	37279583	37289208	+	37103190	37289208	A5SS	0.06	50	50	ENSMUST00000193777.6	ENSMUSG00000103707.6	Pcdha6	chr18	protein_coding	protocadherin alpha 6
chr18	37103190	37289208	+	37103190	37958074	A3SS	0.5	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37109331	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37797418	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37804578	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37809960	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37815892	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37820870	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37825422	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37829977	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37842705	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37850427	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37855970	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37861369	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37866612	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37872596	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37877711	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37882658	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37887246	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37891420	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37897352	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37901593	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37942030	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37948606	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37951036	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37952751	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37952765	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37955187	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37957247	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37957478	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37957609	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37957717	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37957905	37958074	+	37103190	37958074	A5SS	0.03	50	50	ENSMUST00000194544.2	ENSMUSG00000102836.2	Gm37013	chr18	protein_coding	predicted gene, 37013
chr18	37127901	37289208	+	37109331	37289208	A5SS	0.06	50	50	ENSMUST00000192631.2	ENSMUSG00000104318.2	Pcdha7	chr18	protein_coding	protocadherin alpha 7
chr18	37133413	37289208	+	37109331	37289208	A5SS	0.06	50	50	ENSMUST00000192631.2	ENSMUSG00000104318.2	Pcdha7	chr18	protein_coding	protocadherin alpha 7
chr18	37140754	37289208	+	37109331	37289208	A5SS	0.06	50	50	ENSMUST00000192631.2	ENSMUSG00000104318.2	Pcdha7	chr18	protein_coding	protocadherin alpha 7
chr18	37145509	37289208	+	37109331	37289208	A5SS	0.06	50	50	ENSMUST00000192631.2	ENSMUSG00000104318.2	Pcdha7	chr18	protein_coding	protocadherin alpha 7
chr18	37146304	37289208	+	37109331	37289208	A5SS	0.06	50	50	ENSMUST00000192631.2	ENSMUSG00000104318.2	Pcdha7	chr18	protein_coding	protocadherin alpha 7
chr18	37155676	37289208	+	37109331	37289208	A5SS	0.06	50	50	ENSMUST00000192631.2	ENSMUSG00000104318.2	Pcdha7	chr18	protein_coding	protocadherin alpha 7
chr18	37225624	37289208	+	37109331	37289208	A5SS	0.06	50	50	ENSMUST00000192631.2	ENSMUSG00000104318.2	Pcdha7	chr18	protein_coding	protocadherin alpha 7
chr18	37279583	37289208	+	37109331	37289208	A5SS	0.06	50	50	ENSMUST00000192631.2	ENSMUSG00000104318.2	Pcdha7	chr18	protein_coding	protocadherin alpha 7
chr18	37109331	37289208	+	37109331	37958074	A3SS	0.5	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37797418	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37804578	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37809960	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37815892	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37820870	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37825422	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37829977	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37842705	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37850427	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37855970	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37861369	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37866612	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37872596	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37877711	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37882658	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37887246	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37891420	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37897352	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37901593	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37942030	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37948606	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37951036	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37952751	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37952765	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37955187	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37957247	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37957478	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37957609	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37957717	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37957905	37958074	+	37109331	37958074	A5SS	0.03	50	50	ENSMUST00000193984.2	ENSMUSG00000103125.2	Gm37388	chr18	protein_coding	predicted gene, 37388
chr18	37133413	37289208	+	37127901	37289208	A5SS	0.06	50	50	ENSMUST00000194038.2	ENSMUSG00000103800.2	Pcdha8	chr18	protein_coding	protocadherin alpha 8
chr18	37140754	37289208	+	37127901	37289208	A5SS	0.06	50	50	ENSMUST00000194038.2	ENSMUSG00000103800.2	Pcdha8	chr18	protein_coding	protocadherin alpha 8
chr18	37145509	37289208	+	37127901	37289208	A5SS	0.06	50	50	ENSMUST00000194038.2	ENSMUSG00000103800.2	Pcdha8	chr18	protein_coding	protocadherin alpha 8
chr18	37146304	37289208	+	37127901	37289208	A5SS	0.06	50	50	ENSMUST00000194038.2	ENSMUSG00000103800.2	Pcdha8	chr18	protein_coding	protocadherin alpha 8
chr18	37155676	37289208	+	37127901	37289208	A5SS	0.06	50	50	ENSMUST00000194038.2	ENSMUSG00000103800.2	Pcdha8	chr18	protein_coding	protocadherin alpha 8
chr18	37225624	37289208	+	37127901	37289208	A5SS	0.06	50	50	ENSMUST00000194038.2	ENSMUSG00000103800.2	Pcdha8	chr18	protein_coding	protocadherin alpha 8
chr18	37279583	37289208	+	37127901	37289208	A5SS	0.06	50	50	ENSMUST00000194038.2	ENSMUSG00000103800.2	Pcdha8	chr18	protein_coding	protocadherin alpha 8
chr18	37140754	37289208	+	37133413	37289208	A5SS	0.06	50	50	ENSMUST00000115659.6	ENSMUSG00000103770.2	Pcdha9	chr18	protein_coding	protocadherin alpha 9
chr18	37145509	37289208	+	37133413	37289208	A5SS	0.06	50	50	ENSMUST00000115659.6	ENSMUSG00000103770.2	Pcdha9	chr18	protein_coding	protocadherin alpha 9
chr18	37146304	37289208	+	37133413	37289208	A5SS	0.06	50	50	ENSMUST00000115659.6	ENSMUSG00000103770.2	Pcdha9	chr18	protein_coding	protocadherin alpha 9
chr18	37155676	37289208	+	37133413	37289208	A5SS	0.06	50	50	ENSMUST00000115659.6	ENSMUSG00000103770.2	Pcdha9	chr18	protein_coding	protocadherin alpha 9
chr18	37225624	37289208	+	37133413	37289208	A5SS	0.06	50	50	ENSMUST00000115659.6	ENSMUSG00000103770.2	Pcdha9	chr18	protein_coding	protocadherin alpha 9
chr18	37279583	37289208	+	37133413	37289208	A5SS	0.06	50	50	ENSMUST00000115659.6	ENSMUSG00000103770.2	Pcdha9	chr18	protein_coding	protocadherin alpha 9
chr18	37145509	37289208	+	37140754	37289208	A5SS	0.06	50	50	ENSMUST00000115658.6	ENSMUSG00000007440.11	Pcdha11	chr18	protein_coding	protocadherin alpha 11
chr18	37146304	37289208	+	37140754	37289208	A5SS	0.06	50	50	ENSMUST00000115658.6	ENSMUSG00000007440.11	Pcdha11	chr18	protein_coding	protocadherin alpha 11
chr18	37155676	37289208	+	37140754	37289208	A5SS	0.06	50	50	ENSMUST00000115658.6	ENSMUSG00000007440.11	Pcdha11	chr18	protein_coding	protocadherin alpha 11
chr18	37225624	37289208	+	37140754	37289208	A5SS	0.06	50	50	ENSMUST00000115658.6	ENSMUSG00000007440.11	Pcdha11	chr18	protein_coding	protocadherin alpha 11
chr18	37279583	37289208	+	37140754	37289208	A5SS	0.06	50	50	ENSMUST00000115658.6	ENSMUSG00000007440.11	Pcdha11	chr18	protein_coding	protocadherin alpha 11
chr18	37145509	37289208	+	37146304	37289208	A5SS	0.06	50	50	ENSMUST00000194691.2	ENSMUSG00000102206.6	Pcdha11	chr18	protein_coding	protocadherin alpha 11
chr18	37155676	37289208	+	37146304	37289208	A5SS	0.06	50	50	ENSMUST00000194691.2	ENSMUSG00000102206.6	Pcdha11	chr18	protein_coding	protocadherin alpha 11
chr18	37225624	37289208	+	37146304	37289208	A5SS	0.06	50	50	ENSMUST00000194691.2	ENSMUSG00000102206.6	Pcdha11	chr18	protein_coding	protocadherin alpha 11
chr18	37279583	37289208	+	37146304	37289208	A5SS	0.06	50	50	ENSMUST00000194691.2	ENSMUSG00000102206.6	Pcdha11	chr18	protein_coding	protocadherin alpha 11
chr18	37155676	37289208	+	37145509	37289208	A5SS	0.06	50	50	ENSMUST00000193856.2	ENSMUSG00000102206.6	Pcdha11	chr18	protein_coding	protocadherin alpha 11
chr18	37225624	37289208	+	37145509	37289208	A5SS	0.06	50	50	ENSMUST00000193856.2	ENSMUSG00000102206.6	Pcdha11	chr18	protein_coding	protocadherin alpha 11
chr18	37279583	37289208	+	37145509	37289208	A5SS	0.06	50	50	ENSMUST00000193856.2	ENSMUSG00000102206.6	Pcdha11	chr18	protein_coding	protocadherin alpha 11
chr18	37225624	37289208	+	37155676	37289208	A5SS	0.06	50	50	ENSMUST00000047614.4	ENSMUSG00000103310.2	Pcdha12	chr18	protein_coding	protocadherin alpha 12
chr18	37279583	37289208	+	37155676	37289208	A5SS	0.06	50	50	ENSMUST00000047614.4	ENSMUSG00000103310.2	Pcdha12	chr18	protein_coding	protocadherin alpha 12
chr18	37279583	37289208	+	37225624	37289208	A5SS	0.06	50	50	ENSMUST00000007584.4	ENSMUSG00000103255.2	Pcdhac1	chr18	protein_coding	protocadherin alpha subfamily C, 1
chr18	37310472	37311461	-	37302341	37311461	A3SS	0.5	50	50	ENSMUST00000180516.3	ENSMUSG00000097430.3	Gm10544	chr18	lncRNA	predicted gene 10544
chr18	37804578	37958074	+	37797418	37958074	A5SS	0.03	50	50	ENSMUST00000194190.2	ENSMUSG00000103144.2	Pcdhga1	chr18	protein_coding	protocadherin gamma subfamily A, 1
chr18	37809960	37958074	+	37797418	37958074	A5SS	0.03	50	50	ENSMUST00000194190.2	ENSMUSG00000103144.2	Pcdhga1	chr18	protein_coding	protocadherin gamma subfamily A, 1
chr18	37815892	37958074	+	37797418	37958074	A5SS	0.03	50	50	ENSMUST00000194190.2	ENSMUSG00000103144.2	Pcdhga1	chr18	protein_coding	protocadherin gamma subfamily A, 1
chr18	37820870	37958074	+	37797418	37958074	A5SS	0.03	50	50	ENSMUST00000194190.2	ENSMUSG00000103144.2	Pcdhga1	chr18	protein_coding	protocadherin gamma subfamily A, 1
chr18	37825422	37958074	+	37797418	37958074	A5SS	0.03	50	50	ENSMUST00000194190.2	ENSMUSG00000103144.2	Pcdhga1	chr18	protein_coding	protocadherin gamma subfamily A, 1
chr18	37829977	37958074	+	37797418	37958074	A5SS	0.03	50	50	ENSMUST00000194190.2	ENSMUSG00000103144.2	Pcdhga1	chr18	protein_coding	protocadherin gamma subfamily A, 1
chr18	37842705	37958074	+	37797418	37958074	A5SS	0.03	50	50	ENSMUST00000194190.2	ENSMUSG00000103144.2	Pcdhga1	chr18	protein_coding	protocadherin gamma subfamily A, 1
chr18	37850427	37958074	+	37797418	37958074	A5SS	0.03	50	50	ENSMUST00000194190.2	ENSMUSG00000103144.2	Pcdhga1	chr18	protein_coding	protocadherin gamma subfamily A, 1
chr18	37855970	37958074	+	37797418	37958074	A5SS	0.03	50	50	ENSMUST00000194190.2	ENSMUSG00000103144.2	Pcdhga1	chr18	protein_coding	protocadherin gamma subfamily A, 1
chr18	37861369	37958074	+	37797418	37958074	A5SS	0.03	50	50	ENSMUST00000194190.2	ENSMUSG00000103144.2	Pcdhga1	chr18	protein_coding	protocadherin gamma subfamily A, 1
chr18	37866612	37958074	+	37797418	37958074	A5SS	0.03	50	50	ENSMUST00000194190.2	ENSMUSG00000103144.2	Pcdhga1	chr18	protein_coding	protocadherin gamma subfamily A, 1
chr18	37872596	37958074	+	37797418	37958074	A5SS	0.03	50	50	ENSMUST00000194190.2	ENSMUSG00000103144.2	Pcdhga1	chr18	protein_coding	protocadherin gamma subfamily A, 1
chr18	37877711	37958074	+	37797418	37958074	A5SS	0.03	50	50	ENSMUST00000194190.2	ENSMUSG00000103144.2	Pcdhga1	chr18	protein_coding	protocadherin gamma subfamily A, 1
chr18	37882658	37958074	+	37797418	37958074	A5SS	0.03	50	50	ENSMUST00000194190.2	ENSMUSG00000103144.2	Pcdhga1	chr18	protein_coding	protocadherin gamma subfamily A, 1
chr18	37887246	37958074	+	37797418	37958074	A5SS	0.03	50	50	ENSMUST00000194190.2	ENSMUSG00000103144.2	Pcdhga1	chr18	protein_coding	protocadherin gamma subfamily A, 1
chr18	37891420	37958074	+	37797418	37958074	A5SS	0.03	50	50	ENSMUST00000194190.2	ENSMUSG00000103144.2	Pcdhga1	chr18	protein_coding	protocadherin gamma subfamily A, 1
chr18	37897352	37958074	+	37797418	37958074	A5SS	0.03	50	50	ENSMUST00000194190.2	ENSMUSG00000103144.2	Pcdhga1	chr18	protein_coding	protocadherin gamma subfamily A, 1
chr18	37901593	37958074	+	37797418	37958074	A5SS	0.03	50	50	ENSMUST00000194190.2	ENSMUSG00000103144.2	Pcdhga1	chr18	protein_coding	protocadherin gamma subfamily A, 1
chr18	37942030	37958074	+	37797418	37958074	A5SS	0.03	50	50	ENSMUST00000194190.2	ENSMUSG00000103144.2	Pcdhga1	chr18	protein_coding	protocadherin gamma subfamily A, 1
chr18	37948606	37958074	+	37797418	37958074	A5SS	0.03	50	50	ENSMUST00000194190.2	ENSMUSG00000103144.2	Pcdhga1	chr18	protein_coding	protocadherin gamma subfamily A, 1
chr18	37951036	37958074	+	37797418	37958074	A5SS	0.03	50	50	ENSMUST00000194190.2	ENSMUSG00000103144.2	Pcdhga1	chr18	protein_coding	protocadherin gamma subfamily A, 1
chr18	37952751	37958074	+	37797418	37958074	A5SS	0.03	50	50	ENSMUST00000194190.2	ENSMUSG00000103144.2	Pcdhga1	chr18	protein_coding	protocadherin gamma subfamily A, 1
chr18	37952765	37958074	+	37797418	37958074	A5SS	0.03	50	50	ENSMUST00000194190.2	ENSMUSG00000103144.2	Pcdhga1	chr18	protein_coding	protocadherin gamma subfamily A, 1
chr18	37955187	37958074	+	37797418	37958074	A5SS	0.03	50	50	ENSMUST00000194190.2	ENSMUSG00000103144.2	Pcdhga1	chr18	protein_coding	protocadherin gamma subfamily A, 1
chr18	37957247	37958074	+	37797418	37958074	A5SS	0.03	50	50	ENSMUST00000194190.2	ENSMUSG00000103144.2	Pcdhga1	chr18	protein_coding	protocadherin gamma subfamily A, 1
chr18	37957478	37958074	+	37797418	37958074	A5SS	0.03	50	50	ENSMUST00000194190.2	ENSMUSG00000103144.2	Pcdhga1	chr18	protein_coding	protocadherin gamma subfamily A, 1
chr18	37957609	37958074	+	37797418	37958074	A5SS	0.03	50	50	ENSMUST00000194190.2	ENSMUSG00000103144.2	Pcdhga1	chr18	protein_coding	protocadherin gamma subfamily A, 1
chr18	37957717	37958074	+	37797418	37958074	A5SS	0.03	50	50	ENSMUST00000194190.2	ENSMUSG00000103144.2	Pcdhga1	chr18	protein_coding	protocadherin gamma subfamily A, 1
chr18	37957905	37958074	+	37797418	37958074	A5SS	0.03	50	50	ENSMUST00000194190.2	ENSMUSG00000103144.2	Pcdhga1	chr18	protein_coding	protocadherin gamma subfamily A, 1
chr18	37809960	37958074	+	37804578	37958074	A5SS	0.03	50	50	ENSMUST00000193869.2	ENSMUSG00000103332.2	Pcdhga2	chr18	protein_coding	protocadherin gamma subfamily A, 2
chr18	37815892	37958074	+	37804578	37958074	A5SS	0.03	50	50	ENSMUST00000193869.2	ENSMUSG00000103332.2	Pcdhga2	chr18	protein_coding	protocadherin gamma subfamily A, 2
chr18	37820870	37958074	+	37804578	37958074	A5SS	0.03	50	50	ENSMUST00000193869.2	ENSMUSG00000103332.2	Pcdhga2	chr18	protein_coding	protocadherin gamma subfamily A, 2
chr18	37825422	37958074	+	37804578	37958074	A5SS	0.03	50	50	ENSMUST00000193869.2	ENSMUSG00000103332.2	Pcdhga2	chr18	protein_coding	protocadherin gamma subfamily A, 2
chr18	37829977	37958074	+	37804578	37958074	A5SS	0.03	50	50	ENSMUST00000193869.2	ENSMUSG00000103332.2	Pcdhga2	chr18	protein_coding	protocadherin gamma subfamily A, 2
chr18	37842705	37958074	+	37804578	37958074	A5SS	0.03	50	50	ENSMUST00000193869.2	ENSMUSG00000103332.2	Pcdhga2	chr18	protein_coding	protocadherin gamma subfamily A, 2
chr18	37850427	37958074	+	37804578	37958074	A5SS	0.03	50	50	ENSMUST00000193869.2	ENSMUSG00000103332.2	Pcdhga2	chr18	protein_coding	protocadherin gamma subfamily A, 2
chr18	37855970	37958074	+	37804578	37958074	A5SS	0.03	50	50	ENSMUST00000193869.2	ENSMUSG00000103332.2	Pcdhga2	chr18	protein_coding	protocadherin gamma subfamily A, 2
chr18	37861369	37958074	+	37804578	37958074	A5SS	0.03	50	50	ENSMUST00000193869.2	ENSMUSG00000103332.2	Pcdhga2	chr18	protein_coding	protocadherin gamma subfamily A, 2
chr18	37866612	37958074	+	37804578	37958074	A5SS	0.03	50	50	ENSMUST00000193869.2	ENSMUSG00000103332.2	Pcdhga2	chr18	protein_coding	protocadherin gamma subfamily A, 2
chr18	37872596	37958074	+	37804578	37958074	A5SS	0.03	50	50	ENSMUST00000193869.2	ENSMUSG00000103332.2	Pcdhga2	chr18	protein_coding	protocadherin gamma subfamily A, 2
chr18	37877711	37958074	+	37804578	37958074	A5SS	0.03	50	50	ENSMUST00000193869.2	ENSMUSG00000103332.2	Pcdhga2	chr18	protein_coding	protocadherin gamma subfamily A, 2
chr18	37882658	37958074	+	37804578	37958074	A5SS	0.03	50	50	ENSMUST00000193869.2	ENSMUSG00000103332.2	Pcdhga2	chr18	protein_coding	protocadherin gamma subfamily A, 2
chr18	37887246	37958074	+	37804578	37958074	A5SS	0.03	50	50	ENSMUST00000193869.2	ENSMUSG00000103332.2	Pcdhga2	chr18	protein_coding	protocadherin gamma subfamily A, 2
chr18	37891420	37958074	+	37804578	37958074	A5SS	0.03	50	50	ENSMUST00000193869.2	ENSMUSG00000103332.2	Pcdhga2	chr18	protein_coding	protocadherin gamma subfamily A, 2
chr18	37897352	37958074	+	37804578	37958074	A5SS	0.03	50	50	ENSMUST00000193869.2	ENSMUSG00000103332.2	Pcdhga2	chr18	protein_coding	protocadherin gamma subfamily A, 2
chr18	37901593	37958074	+	37804578	37958074	A5SS	0.03	50	50	ENSMUST00000193869.2	ENSMUSG00000103332.2	Pcdhga2	chr18	protein_coding	protocadherin gamma subfamily A, 2
chr18	37942030	37958074	+	37804578	37958074	A5SS	0.03	50	50	ENSMUST00000193869.2	ENSMUSG00000103332.2	Pcdhga2	chr18	protein_coding	protocadherin gamma subfamily A, 2
chr18	37948606	37958074	+	37804578	37958074	A5SS	0.03	50	50	ENSMUST00000193869.2	ENSMUSG00000103332.2	Pcdhga2	chr18	protein_coding	protocadherin gamma subfamily A, 2
chr18	37951036	37958074	+	37804578	37958074	A5SS	0.03	50	50	ENSMUST00000193869.2	ENSMUSG00000103332.2	Pcdhga2	chr18	protein_coding	protocadherin gamma subfamily A, 2
chr18	37952751	37958074	+	37804578	37958074	A5SS	0.03	50	50	ENSMUST00000193869.2	ENSMUSG00000103332.2	Pcdhga2	chr18	protein_coding	protocadherin gamma subfamily A, 2
chr18	37952765	37958074	+	37804578	37958074	A5SS	0.03	50	50	ENSMUST00000193869.2	ENSMUSG00000103332.2	Pcdhga2	chr18	protein_coding	protocadherin gamma subfamily A, 2
chr18	37955187	37958074	+	37804578	37958074	A5SS	0.03	50	50	ENSMUST00000193869.2	ENSMUSG00000103332.2	Pcdhga2	chr18	protein_coding	protocadherin gamma subfamily A, 2
chr18	37957247	37958074	+	37804578	37958074	A5SS	0.03	50	50	ENSMUST00000193869.2	ENSMUSG00000103332.2	Pcdhga2	chr18	protein_coding	protocadherin gamma subfamily A, 2
chr18	37957478	37958074	+	37804578	37958074	A5SS	0.03	50	50	ENSMUST00000193869.2	ENSMUSG00000103332.2	Pcdhga2	chr18	protein_coding	protocadherin gamma subfamily A, 2
chr18	37957609	37958074	+	37804578	37958074	A5SS	0.03	50	50	ENSMUST00000193869.2	ENSMUSG00000103332.2	Pcdhga2	chr18	protein_coding	protocadherin gamma subfamily A, 2
chr18	37957717	37958074	+	37804578	37958074	A5SS	0.03	50	50	ENSMUST00000193869.2	ENSMUSG00000103332.2	Pcdhga2	chr18	protein_coding	protocadherin gamma subfamily A, 2
chr18	37957905	37958074	+	37804578	37958074	A5SS	0.03	50	50	ENSMUST00000193869.2	ENSMUSG00000103332.2	Pcdhga2	chr18	protein_coding	protocadherin gamma subfamily A, 2
chr18	37815892	37958074	+	37809960	37958074	A5SS	0.03	50	50	ENSMUST00000073447.8	ENSMUSG00000104346.2	Pcdhga3	chr18	protein_coding	protocadherin gamma subfamily A, 3
chr18	37820870	37958074	+	37809960	37958074	A5SS	0.03	50	50	ENSMUST00000073447.8	ENSMUSG00000104346.2	Pcdhga3	chr18	protein_coding	protocadherin gamma subfamily A, 3
chr18	37825422	37958074	+	37809960	37958074	A5SS	0.03	50	50	ENSMUST00000073447.8	ENSMUSG00000104346.2	Pcdhga3	chr18	protein_coding	protocadherin gamma subfamily A, 3
chr18	37829977	37958074	+	37809960	37958074	A5SS	0.03	50	50	ENSMUST00000073447.8	ENSMUSG00000104346.2	Pcdhga3	chr18	protein_coding	protocadherin gamma subfamily A, 3
chr18	37842705	37958074	+	37809960	37958074	A5SS	0.03	50	50	ENSMUST00000073447.8	ENSMUSG00000104346.2	Pcdhga3	chr18	protein_coding	protocadherin gamma subfamily A, 3
chr18	37850427	37958074	+	37809960	37958074	A5SS	0.03	50	50	ENSMUST00000073447.8	ENSMUSG00000104346.2	Pcdhga3	chr18	protein_coding	protocadherin gamma subfamily A, 3
chr18	37855970	37958074	+	37809960	37958074	A5SS	0.03	50	50	ENSMUST00000073447.8	ENSMUSG00000104346.2	Pcdhga3	chr18	protein_coding	protocadherin gamma subfamily A, 3
chr18	37861369	37958074	+	37809960	37958074	A5SS	0.03	50	50	ENSMUST00000073447.8	ENSMUSG00000104346.2	Pcdhga3	chr18	protein_coding	protocadherin gamma subfamily A, 3
chr18	37866612	37958074	+	37809960	37958074	A5SS	0.03	50	50	ENSMUST00000073447.8	ENSMUSG00000104346.2	Pcdhga3	chr18	protein_coding	protocadherin gamma subfamily A, 3
chr18	37872596	37958074	+	37809960	37958074	A5SS	0.03	50	50	ENSMUST00000073447.8	ENSMUSG00000104346.2	Pcdhga3	chr18	protein_coding	protocadherin gamma subfamily A, 3
chr18	37877711	37958074	+	37809960	37958074	A5SS	0.03	50	50	ENSMUST00000073447.8	ENSMUSG00000104346.2	Pcdhga3	chr18	protein_coding	protocadherin gamma subfamily A, 3
chr18	37882658	37958074	+	37809960	37958074	A5SS	0.03	50	50	ENSMUST00000073447.8	ENSMUSG00000104346.2	Pcdhga3	chr18	protein_coding	protocadherin gamma subfamily A, 3
chr18	37887246	37958074	+	37809960	37958074	A5SS	0.03	50	50	ENSMUST00000073447.8	ENSMUSG00000104346.2	Pcdhga3	chr18	protein_coding	protocadherin gamma subfamily A, 3
chr18	37891420	37958074	+	37809960	37958074	A5SS	0.03	50	50	ENSMUST00000073447.8	ENSMUSG00000104346.2	Pcdhga3	chr18	protein_coding	protocadherin gamma subfamily A, 3
chr18	37897352	37958074	+	37809960	37958074	A5SS	0.03	50	50	ENSMUST00000073447.8	ENSMUSG00000104346.2	Pcdhga3	chr18	protein_coding	protocadherin gamma subfamily A, 3
chr18	37901593	37958074	+	37809960	37958074	A5SS	0.03	50	50	ENSMUST00000073447.8	ENSMUSG00000104346.2	Pcdhga3	chr18	protein_coding	protocadherin gamma subfamily A, 3
chr18	37942030	37958074	+	37809960	37958074	A5SS	0.03	50	50	ENSMUST00000073447.8	ENSMUSG00000104346.2	Pcdhga3	chr18	protein_coding	protocadherin gamma subfamily A, 3
chr18	37948606	37958074	+	37809960	37958074	A5SS	0.03	50	50	ENSMUST00000073447.8	ENSMUSG00000104346.2	Pcdhga3	chr18	protein_coding	protocadherin gamma subfamily A, 3
chr18	37951036	37958074	+	37809960	37958074	A5SS	0.03	50	50	ENSMUST00000073447.8	ENSMUSG00000104346.2	Pcdhga3	chr18	protein_coding	protocadherin gamma subfamily A, 3
chr18	37952751	37958074	+	37809960	37958074	A5SS	0.03	50	50	ENSMUST00000073447.8	ENSMUSG00000104346.2	Pcdhga3	chr18	protein_coding	protocadherin gamma subfamily A, 3
chr18	37952765	37958074	+	37809960	37958074	A5SS	0.03	50	50	ENSMUST00000073447.8	ENSMUSG00000104346.2	Pcdhga3	chr18	protein_coding	protocadherin gamma subfamily A, 3
chr18	37955187	37958074	+	37809960	37958074	A5SS	0.03	50	50	ENSMUST00000073447.8	ENSMUSG00000104346.2	Pcdhga3	chr18	protein_coding	protocadherin gamma subfamily A, 3
chr18	37957247	37958074	+	37809960	37958074	A5SS	0.03	50	50	ENSMUST00000073447.8	ENSMUSG00000104346.2	Pcdhga3	chr18	protein_coding	protocadherin gamma subfamily A, 3
chr18	37957478	37958074	+	37809960	37958074	A5SS	0.03	50	50	ENSMUST00000073447.8	ENSMUSG00000104346.2	Pcdhga3	chr18	protein_coding	protocadherin gamma subfamily A, 3
chr18	37957609	37958074	+	37809960	37958074	A5SS	0.03	50	50	ENSMUST00000073447.8	ENSMUSG00000104346.2	Pcdhga3	chr18	protein_coding	protocadherin gamma subfamily A, 3
chr18	37957717	37958074	+	37809960	37958074	A5SS	0.03	50	50	ENSMUST00000073447.8	ENSMUSG00000104346.2	Pcdhga3	chr18	protein_coding	protocadherin gamma subfamily A, 3
chr18	37957905	37958074	+	37809960	37958074	A5SS	0.03	50	50	ENSMUST00000073447.8	ENSMUSG00000104346.2	Pcdhga3	chr18	protein_coding	protocadherin gamma subfamily A, 3
chr18	37815892	37818248	+	37815892	37958074	A3SS	0.5	50	50	ENSMUST00000192931.2	ENSMUSG00000103037.2	Pcdhgb1	chr18	protein_coding	protocadherin gamma subfamily B, 1
chr18	37820870	37958074	+	37815892	37958074	A5SS	0.03	50	50	ENSMUST00000192931.2	ENSMUSG00000103037.2	Pcdhgb1	chr18	protein_coding	protocadherin gamma subfamily B, 1
chr18	37825422	37958074	+	37815892	37958074	A5SS	0.03	50	50	ENSMUST00000192931.2	ENSMUSG00000103037.2	Pcdhgb1	chr18	protein_coding	protocadherin gamma subfamily B, 1
chr18	37829977	37958074	+	37815892	37958074	A5SS	0.03	50	50	ENSMUST00000192931.2	ENSMUSG00000103037.2	Pcdhgb1	chr18	protein_coding	protocadherin gamma subfamily B, 1
chr18	37842705	37958074	+	37815892	37958074	A5SS	0.03	50	50	ENSMUST00000192931.2	ENSMUSG00000103037.2	Pcdhgb1	chr18	protein_coding	protocadherin gamma subfamily B, 1
chr18	37850427	37958074	+	37815892	37958074	A5SS	0.03	50	50	ENSMUST00000192931.2	ENSMUSG00000103037.2	Pcdhgb1	chr18	protein_coding	protocadherin gamma subfamily B, 1
chr18	37855970	37958074	+	37815892	37958074	A5SS	0.03	50	50	ENSMUST00000192931.2	ENSMUSG00000103037.2	Pcdhgb1	chr18	protein_coding	protocadherin gamma subfamily B, 1
chr18	37861369	37958074	+	37815892	37958074	A5SS	0.03	50	50	ENSMUST00000192931.2	ENSMUSG00000103037.2	Pcdhgb1	chr18	protein_coding	protocadherin gamma subfamily B, 1
chr18	37866612	37958074	+	37815892	37958074	A5SS	0.03	50	50	ENSMUST00000192931.2	ENSMUSG00000103037.2	Pcdhgb1	chr18	protein_coding	protocadherin gamma subfamily B, 1
chr18	37872596	37958074	+	37815892	37958074	A5SS	0.03	50	50	ENSMUST00000192931.2	ENSMUSG00000103037.2	Pcdhgb1	chr18	protein_coding	protocadherin gamma subfamily B, 1
chr18	37877711	37958074	+	37815892	37958074	A5SS	0.03	50	50	ENSMUST00000192931.2	ENSMUSG00000103037.2	Pcdhgb1	chr18	protein_coding	protocadherin gamma subfamily B, 1
chr18	37882658	37958074	+	37815892	37958074	A5SS	0.03	50	50	ENSMUST00000192931.2	ENSMUSG00000103037.2	Pcdhgb1	chr18	protein_coding	protocadherin gamma subfamily B, 1
chr18	37887246	37958074	+	37815892	37958074	A5SS	0.03	50	50	ENSMUST00000192931.2	ENSMUSG00000103037.2	Pcdhgb1	chr18	protein_coding	protocadherin gamma subfamily B, 1
chr18	37891420	37958074	+	37815892	37958074	A5SS	0.03	50	50	ENSMUST00000192931.2	ENSMUSG00000103037.2	Pcdhgb1	chr18	protein_coding	protocadherin gamma subfamily B, 1
chr18	37897352	37958074	+	37815892	37958074	A5SS	0.03	50	50	ENSMUST00000192931.2	ENSMUSG00000103037.2	Pcdhgb1	chr18	protein_coding	protocadherin gamma subfamily B, 1
chr18	37901593	37958074	+	37815892	37958074	A5SS	0.03	50	50	ENSMUST00000192931.2	ENSMUSG00000103037.2	Pcdhgb1	chr18	protein_coding	protocadherin gamma subfamily B, 1
chr18	37942030	37958074	+	37815892	37958074	A5SS	0.03	50	50	ENSMUST00000192931.2	ENSMUSG00000103037.2	Pcdhgb1	chr18	protein_coding	protocadherin gamma subfamily B, 1
chr18	37948606	37958074	+	37815892	37958074	A5SS	0.03	50	50	ENSMUST00000192931.2	ENSMUSG00000103037.2	Pcdhgb1	chr18	protein_coding	protocadherin gamma subfamily B, 1
chr18	37951036	37958074	+	37815892	37958074	A5SS	0.03	50	50	ENSMUST00000192931.2	ENSMUSG00000103037.2	Pcdhgb1	chr18	protein_coding	protocadherin gamma subfamily B, 1
chr18	37952751	37958074	+	37815892	37958074	A5SS	0.03	50	50	ENSMUST00000192931.2	ENSMUSG00000103037.2	Pcdhgb1	chr18	protein_coding	protocadherin gamma subfamily B, 1
chr18	37952765	37958074	+	37815892	37958074	A5SS	0.03	50	50	ENSMUST00000192931.2	ENSMUSG00000103037.2	Pcdhgb1	chr18	protein_coding	protocadherin gamma subfamily B, 1
chr18	37955187	37958074	+	37815892	37958074	A5SS	0.03	50	50	ENSMUST00000192931.2	ENSMUSG00000103037.2	Pcdhgb1	chr18	protein_coding	protocadherin gamma subfamily B, 1
chr18	37957247	37958074	+	37815892	37958074	A5SS	0.03	50	50	ENSMUST00000192931.2	ENSMUSG00000103037.2	Pcdhgb1	chr18	protein_coding	protocadherin gamma subfamily B, 1
chr18	37957478	37958074	+	37815892	37958074	A5SS	0.03	50	50	ENSMUST00000192931.2	ENSMUSG00000103037.2	Pcdhgb1	chr18	protein_coding	protocadherin gamma subfamily B, 1
chr18	37957609	37958074	+	37815892	37958074	A5SS	0.03	50	50	ENSMUST00000192931.2	ENSMUSG00000103037.2	Pcdhgb1	chr18	protein_coding	protocadherin gamma subfamily B, 1
chr18	37957717	37958074	+	37815892	37958074	A5SS	0.03	50	50	ENSMUST00000192931.2	ENSMUSG00000103037.2	Pcdhgb1	chr18	protein_coding	protocadherin gamma subfamily B, 1
chr18	37957905	37958074	+	37815892	37958074	A5SS	0.03	50	50	ENSMUST00000192931.2	ENSMUSG00000103037.2	Pcdhgb1	chr18	protein_coding	protocadherin gamma subfamily B, 1
chr18	37825422	37958074	+	37820870	37958074	A5SS	0.03	50	50	ENSMUST00000194418.2	ENSMUSG00000103677.2	Pcdhga4	chr18	protein_coding	protocadherin gamma subfamily A, 4
chr18	37829977	37958074	+	37820870	37958074	A5SS	0.03	50	50	ENSMUST00000194418.2	ENSMUSG00000103677.2	Pcdhga4	chr18	protein_coding	protocadherin gamma subfamily A, 4
chr18	37842705	37958074	+	37820870	37958074	A5SS	0.03	50	50	ENSMUST00000194418.2	ENSMUSG00000103677.2	Pcdhga4	chr18	protein_coding	protocadherin gamma subfamily A, 4
chr18	37850427	37958074	+	37820870	37958074	A5SS	0.03	50	50	ENSMUST00000194418.2	ENSMUSG00000103677.2	Pcdhga4	chr18	protein_coding	protocadherin gamma subfamily A, 4
chr18	37855970	37958074	+	37820870	37958074	A5SS	0.03	50	50	ENSMUST00000194418.2	ENSMUSG00000103677.2	Pcdhga4	chr18	protein_coding	protocadherin gamma subfamily A, 4
chr18	37861369	37958074	+	37820870	37958074	A5SS	0.03	50	50	ENSMUST00000194418.2	ENSMUSG00000103677.2	Pcdhga4	chr18	protein_coding	protocadherin gamma subfamily A, 4
chr18	37866612	37958074	+	37820870	37958074	A5SS	0.03	50	50	ENSMUST00000194418.2	ENSMUSG00000103677.2	Pcdhga4	chr18	protein_coding	protocadherin gamma subfamily A, 4
chr18	37872596	37958074	+	37820870	37958074	A5SS	0.03	50	50	ENSMUST00000194418.2	ENSMUSG00000103677.2	Pcdhga4	chr18	protein_coding	protocadherin gamma subfamily A, 4
chr18	37877711	37958074	+	37820870	37958074	A5SS	0.03	50	50	ENSMUST00000194418.2	ENSMUSG00000103677.2	Pcdhga4	chr18	protein_coding	protocadherin gamma subfamily A, 4
chr18	37882658	37958074	+	37820870	37958074	A5SS	0.03	50	50	ENSMUST00000194418.2	ENSMUSG00000103677.2	Pcdhga4	chr18	protein_coding	protocadherin gamma subfamily A, 4
chr18	37887246	37958074	+	37820870	37958074	A5SS	0.03	50	50	ENSMUST00000194418.2	ENSMUSG00000103677.2	Pcdhga4	chr18	protein_coding	protocadherin gamma subfamily A, 4
chr18	37891420	37958074	+	37820870	37958074	A5SS	0.03	50	50	ENSMUST00000194418.2	ENSMUSG00000103677.2	Pcdhga4	chr18	protein_coding	protocadherin gamma subfamily A, 4
chr18	37897352	37958074	+	37820870	37958074	A5SS	0.03	50	50	ENSMUST00000194418.2	ENSMUSG00000103677.2	Pcdhga4	chr18	protein_coding	protocadherin gamma subfamily A, 4
chr18	37901593	37958074	+	37820870	37958074	A5SS	0.03	50	50	ENSMUST00000194418.2	ENSMUSG00000103677.2	Pcdhga4	chr18	protein_coding	protocadherin gamma subfamily A, 4
chr18	37942030	37958074	+	37820870	37958074	A5SS	0.03	50	50	ENSMUST00000194418.2	ENSMUSG00000103677.2	Pcdhga4	chr18	protein_coding	protocadherin gamma subfamily A, 4
chr18	37948606	37958074	+	37820870	37958074	A5SS	0.03	50	50	ENSMUST00000194418.2	ENSMUSG00000103677.2	Pcdhga4	chr18	protein_coding	protocadherin gamma subfamily A, 4
chr18	37951036	37958074	+	37820870	37958074	A5SS	0.03	50	50	ENSMUST00000194418.2	ENSMUSG00000103677.2	Pcdhga4	chr18	protein_coding	protocadherin gamma subfamily A, 4
chr18	37952751	37958074	+	37820870	37958074	A5SS	0.03	50	50	ENSMUST00000194418.2	ENSMUSG00000103677.2	Pcdhga4	chr18	protein_coding	protocadherin gamma subfamily A, 4
chr18	37952765	37958074	+	37820870	37958074	A5SS	0.03	50	50	ENSMUST00000194418.2	ENSMUSG00000103677.2	Pcdhga4	chr18	protein_coding	protocadherin gamma subfamily A, 4
chr18	37955187	37958074	+	37820870	37958074	A5SS	0.03	50	50	ENSMUST00000194418.2	ENSMUSG00000103677.2	Pcdhga4	chr18	protein_coding	protocadherin gamma subfamily A, 4
chr18	37957247	37958074	+	37820870	37958074	A5SS	0.03	50	50	ENSMUST00000194418.2	ENSMUSG00000103677.2	Pcdhga4	chr18	protein_coding	protocadherin gamma subfamily A, 4
chr18	37957478	37958074	+	37820870	37958074	A5SS	0.03	50	50	ENSMUST00000194418.2	ENSMUSG00000103677.2	Pcdhga4	chr18	protein_coding	protocadherin gamma subfamily A, 4
chr18	37957609	37958074	+	37820870	37958074	A5SS	0.03	50	50	ENSMUST00000194418.2	ENSMUSG00000103677.2	Pcdhga4	chr18	protein_coding	protocadherin gamma subfamily A, 4
chr18	37957717	37958074	+	37820870	37958074	A5SS	0.03	50	50	ENSMUST00000194418.2	ENSMUSG00000103677.2	Pcdhga4	chr18	protein_coding	protocadherin gamma subfamily A, 4
chr18	37957905	37958074	+	37820870	37958074	A5SS	0.03	50	50	ENSMUST00000194418.2	ENSMUSG00000103677.2	Pcdhga4	chr18	protein_coding	protocadherin gamma subfamily A, 4
chr18	37829977	37958074	+	37825422	37958074	A5SS	0.03	50	50	ENSMUST00000195112.2	ENSMUSG00000102748.2	Pcdhgb2	chr18	protein_coding	protocadherin gamma subfamily B, 2
chr18	37842705	37958074	+	37825422	37958074	A5SS	0.03	50	50	ENSMUST00000195112.2	ENSMUSG00000102748.2	Pcdhgb2	chr18	protein_coding	protocadherin gamma subfamily B, 2
chr18	37850427	37958074	+	37825422	37958074	A5SS	0.03	50	50	ENSMUST00000195112.2	ENSMUSG00000102748.2	Pcdhgb2	chr18	protein_coding	protocadherin gamma subfamily B, 2
chr18	37855970	37958074	+	37825422	37958074	A5SS	0.03	50	50	ENSMUST00000195112.2	ENSMUSG00000102748.2	Pcdhgb2	chr18	protein_coding	protocadherin gamma subfamily B, 2
chr18	37861369	37958074	+	37825422	37958074	A5SS	0.03	50	50	ENSMUST00000195112.2	ENSMUSG00000102748.2	Pcdhgb2	chr18	protein_coding	protocadherin gamma subfamily B, 2
chr18	37866612	37958074	+	37825422	37958074	A5SS	0.03	50	50	ENSMUST00000195112.2	ENSMUSG00000102748.2	Pcdhgb2	chr18	protein_coding	protocadherin gamma subfamily B, 2
chr18	37872596	37958074	+	37825422	37958074	A5SS	0.03	50	50	ENSMUST00000195112.2	ENSMUSG00000102748.2	Pcdhgb2	chr18	protein_coding	protocadherin gamma subfamily B, 2
chr18	37877711	37958074	+	37825422	37958074	A5SS	0.03	50	50	ENSMUST00000195112.2	ENSMUSG00000102748.2	Pcdhgb2	chr18	protein_coding	protocadherin gamma subfamily B, 2
chr18	37882658	37958074	+	37825422	37958074	A5SS	0.03	50	50	ENSMUST00000195112.2	ENSMUSG00000102748.2	Pcdhgb2	chr18	protein_coding	protocadherin gamma subfamily B, 2
chr18	37887246	37958074	+	37825422	37958074	A5SS	0.03	50	50	ENSMUST00000195112.2	ENSMUSG00000102748.2	Pcdhgb2	chr18	protein_coding	protocadherin gamma subfamily B, 2
chr18	37891420	37958074	+	37825422	37958074	A5SS	0.03	50	50	ENSMUST00000195112.2	ENSMUSG00000102748.2	Pcdhgb2	chr18	protein_coding	protocadherin gamma subfamily B, 2
chr18	37897352	37958074	+	37825422	37958074	A5SS	0.03	50	50	ENSMUST00000195112.2	ENSMUSG00000102748.2	Pcdhgb2	chr18	protein_coding	protocadherin gamma subfamily B, 2
chr18	37901593	37958074	+	37825422	37958074	A5SS	0.03	50	50	ENSMUST00000195112.2	ENSMUSG00000102748.2	Pcdhgb2	chr18	protein_coding	protocadherin gamma subfamily B, 2
chr18	37942030	37958074	+	37825422	37958074	A5SS	0.03	50	50	ENSMUST00000195112.2	ENSMUSG00000102748.2	Pcdhgb2	chr18	protein_coding	protocadherin gamma subfamily B, 2
chr18	37948606	37958074	+	37825422	37958074	A5SS	0.03	50	50	ENSMUST00000195112.2	ENSMUSG00000102748.2	Pcdhgb2	chr18	protein_coding	protocadherin gamma subfamily B, 2
chr18	37951036	37958074	+	37825422	37958074	A5SS	0.03	50	50	ENSMUST00000195112.2	ENSMUSG00000102748.2	Pcdhgb2	chr18	protein_coding	protocadherin gamma subfamily B, 2
chr18	37952751	37958074	+	37825422	37958074	A5SS	0.03	50	50	ENSMUST00000195112.2	ENSMUSG00000102748.2	Pcdhgb2	chr18	protein_coding	protocadherin gamma subfamily B, 2
chr18	37952765	37958074	+	37825422	37958074	A5SS	0.03	50	50	ENSMUST00000195112.2	ENSMUSG00000102748.2	Pcdhgb2	chr18	protein_coding	protocadherin gamma subfamily B, 2
chr18	37955187	37958074	+	37825422	37958074	A5SS	0.03	50	50	ENSMUST00000195112.2	ENSMUSG00000102748.2	Pcdhgb2	chr18	protein_coding	protocadherin gamma subfamily B, 2
chr18	37957247	37958074	+	37825422	37958074	A5SS	0.03	50	50	ENSMUST00000195112.2	ENSMUSG00000102748.2	Pcdhgb2	chr18	protein_coding	protocadherin gamma subfamily B, 2
chr18	37957478	37958074	+	37825422	37958074	A5SS	0.03	50	50	ENSMUST00000195112.2	ENSMUSG00000102748.2	Pcdhgb2	chr18	protein_coding	protocadherin gamma subfamily B, 2
chr18	37957609	37958074	+	37825422	37958074	A5SS	0.03	50	50	ENSMUST00000195112.2	ENSMUSG00000102748.2	Pcdhgb2	chr18	protein_coding	protocadherin gamma subfamily B, 2
chr18	37957717	37958074	+	37825422	37958074	A5SS	0.03	50	50	ENSMUST00000195112.2	ENSMUSG00000102748.2	Pcdhgb2	chr18	protein_coding	protocadherin gamma subfamily B, 2
chr18	37957905	37958074	+	37825422	37958074	A5SS	0.03	50	50	ENSMUST00000195112.2	ENSMUSG00000102748.2	Pcdhgb2	chr18	protein_coding	protocadherin gamma subfamily B, 2
chr18	37842705	37958074	+	37829977	37958074	A5SS	0.03	50	50	ENSMUST00000193414.2	ENSMUSG00000103567.2	Pcdhga5	chr18	protein_coding	protocadherin gamma subfamily A, 5
chr18	37850427	37958074	+	37829977	37958074	A5SS	0.03	50	50	ENSMUST00000193414.2	ENSMUSG00000103567.2	Pcdhga5	chr18	protein_coding	protocadherin gamma subfamily A, 5
chr18	37855970	37958074	+	37829977	37958074	A5SS	0.03	50	50	ENSMUST00000193414.2	ENSMUSG00000103567.2	Pcdhga5	chr18	protein_coding	protocadherin gamma subfamily A, 5
chr18	37861369	37958074	+	37829977	37958074	A5SS	0.03	50	50	ENSMUST00000193414.2	ENSMUSG00000103567.2	Pcdhga5	chr18	protein_coding	protocadherin gamma subfamily A, 5
chr18	37866612	37958074	+	37829977	37958074	A5SS	0.03	50	50	ENSMUST00000193414.2	ENSMUSG00000103567.2	Pcdhga5	chr18	protein_coding	protocadherin gamma subfamily A, 5
chr18	37872596	37958074	+	37829977	37958074	A5SS	0.03	50	50	ENSMUST00000193414.2	ENSMUSG00000103567.2	Pcdhga5	chr18	protein_coding	protocadherin gamma subfamily A, 5
chr18	37877711	37958074	+	37829977	37958074	A5SS	0.03	50	50	ENSMUST00000193414.2	ENSMUSG00000103567.2	Pcdhga5	chr18	protein_coding	protocadherin gamma subfamily A, 5
chr18	37882658	37958074	+	37829977	37958074	A5SS	0.03	50	50	ENSMUST00000193414.2	ENSMUSG00000103567.2	Pcdhga5	chr18	protein_coding	protocadherin gamma subfamily A, 5
chr18	37887246	37958074	+	37829977	37958074	A5SS	0.03	50	50	ENSMUST00000193414.2	ENSMUSG00000103567.2	Pcdhga5	chr18	protein_coding	protocadherin gamma subfamily A, 5
chr18	37891420	37958074	+	37829977	37958074	A5SS	0.03	50	50	ENSMUST00000193414.2	ENSMUSG00000103567.2	Pcdhga5	chr18	protein_coding	protocadherin gamma subfamily A, 5
chr18	37897352	37958074	+	37829977	37958074	A5SS	0.03	50	50	ENSMUST00000193414.2	ENSMUSG00000103567.2	Pcdhga5	chr18	protein_coding	protocadherin gamma subfamily A, 5
chr18	37901593	37958074	+	37829977	37958074	A5SS	0.03	50	50	ENSMUST00000193414.2	ENSMUSG00000103567.2	Pcdhga5	chr18	protein_coding	protocadherin gamma subfamily A, 5
chr18	37942030	37958074	+	37829977	37958074	A5SS	0.03	50	50	ENSMUST00000193414.2	ENSMUSG00000103567.2	Pcdhga5	chr18	protein_coding	protocadherin gamma subfamily A, 5
chr18	37948606	37958074	+	37829977	37958074	A5SS	0.03	50	50	ENSMUST00000193414.2	ENSMUSG00000103567.2	Pcdhga5	chr18	protein_coding	protocadherin gamma subfamily A, 5
chr18	37951036	37958074	+	37829977	37958074	A5SS	0.03	50	50	ENSMUST00000193414.2	ENSMUSG00000103567.2	Pcdhga5	chr18	protein_coding	protocadherin gamma subfamily A, 5
chr18	37952751	37958074	+	37829977	37958074	A5SS	0.03	50	50	ENSMUST00000193414.2	ENSMUSG00000103567.2	Pcdhga5	chr18	protein_coding	protocadherin gamma subfamily A, 5
chr18	37952765	37958074	+	37829977	37958074	A5SS	0.03	50	50	ENSMUST00000193414.2	ENSMUSG00000103567.2	Pcdhga5	chr18	protein_coding	protocadherin gamma subfamily A, 5
chr18	37955187	37958074	+	37829977	37958074	A5SS	0.03	50	50	ENSMUST00000193414.2	ENSMUSG00000103567.2	Pcdhga5	chr18	protein_coding	protocadherin gamma subfamily A, 5
chr18	37957247	37958074	+	37829977	37958074	A5SS	0.03	50	50	ENSMUST00000193414.2	ENSMUSG00000103567.2	Pcdhga5	chr18	protein_coding	protocadherin gamma subfamily A, 5
chr18	37957478	37958074	+	37829977	37958074	A5SS	0.03	50	50	ENSMUST00000193414.2	ENSMUSG00000103567.2	Pcdhga5	chr18	protein_coding	protocadherin gamma subfamily A, 5
chr18	37957609	37958074	+	37829977	37958074	A5SS	0.03	50	50	ENSMUST00000193414.2	ENSMUSG00000103567.2	Pcdhga5	chr18	protein_coding	protocadherin gamma subfamily A, 5
chr18	37957717	37958074	+	37829977	37958074	A5SS	0.03	50	50	ENSMUST00000193414.2	ENSMUSG00000103567.2	Pcdhga5	chr18	protein_coding	protocadherin gamma subfamily A, 5
chr18	37957905	37958074	+	37829977	37958074	A5SS	0.03	50	50	ENSMUST00000193414.2	ENSMUSG00000103567.2	Pcdhga5	chr18	protein_coding	protocadherin gamma subfamily A, 5
chr18	37850427	37958074	+	37842705	37958074	A5SS	0.03	50	50	ENSMUST00000195823.2	ENSMUSG00000103793.2	Pcdhga6	chr18	protein_coding	protocadherin gamma subfamily A, 6
chr18	37855970	37958074	+	37842705	37958074	A5SS	0.03	50	50	ENSMUST00000195823.2	ENSMUSG00000103793.2	Pcdhga6	chr18	protein_coding	protocadherin gamma subfamily A, 6
chr18	37861369	37958074	+	37842705	37958074	A5SS	0.03	50	50	ENSMUST00000195823.2	ENSMUSG00000103793.2	Pcdhga6	chr18	protein_coding	protocadherin gamma subfamily A, 6
chr18	37866612	37958074	+	37842705	37958074	A5SS	0.03	50	50	ENSMUST00000195823.2	ENSMUSG00000103793.2	Pcdhga6	chr18	protein_coding	protocadherin gamma subfamily A, 6
chr18	37872596	37958074	+	37842705	37958074	A5SS	0.03	50	50	ENSMUST00000195823.2	ENSMUSG00000103793.2	Pcdhga6	chr18	protein_coding	protocadherin gamma subfamily A, 6
chr18	37877711	37958074	+	37842705	37958074	A5SS	0.03	50	50	ENSMUST00000195823.2	ENSMUSG00000103793.2	Pcdhga6	chr18	protein_coding	protocadherin gamma subfamily A, 6
chr18	37882658	37958074	+	37842705	37958074	A5SS	0.03	50	50	ENSMUST00000195823.2	ENSMUSG00000103793.2	Pcdhga6	chr18	protein_coding	protocadherin gamma subfamily A, 6
chr18	37887246	37958074	+	37842705	37958074	A5SS	0.03	50	50	ENSMUST00000195823.2	ENSMUSG00000103793.2	Pcdhga6	chr18	protein_coding	protocadherin gamma subfamily A, 6
chr18	37891420	37958074	+	37842705	37958074	A5SS	0.03	50	50	ENSMUST00000195823.2	ENSMUSG00000103793.2	Pcdhga6	chr18	protein_coding	protocadherin gamma subfamily A, 6
chr18	37897352	37958074	+	37842705	37958074	A5SS	0.03	50	50	ENSMUST00000195823.2	ENSMUSG00000103793.2	Pcdhga6	chr18	protein_coding	protocadherin gamma subfamily A, 6
chr18	37901593	37958074	+	37842705	37958074	A5SS	0.03	50	50	ENSMUST00000195823.2	ENSMUSG00000103793.2	Pcdhga6	chr18	protein_coding	protocadherin gamma subfamily A, 6
chr18	37942030	37958074	+	37842705	37958074	A5SS	0.03	50	50	ENSMUST00000195823.2	ENSMUSG00000103793.2	Pcdhga6	chr18	protein_coding	protocadherin gamma subfamily A, 6
chr18	37948606	37958074	+	37842705	37958074	A5SS	0.03	50	50	ENSMUST00000195823.2	ENSMUSG00000103793.2	Pcdhga6	chr18	protein_coding	protocadherin gamma subfamily A, 6
chr18	37951036	37958074	+	37842705	37958074	A5SS	0.03	50	50	ENSMUST00000195823.2	ENSMUSG00000103793.2	Pcdhga6	chr18	protein_coding	protocadherin gamma subfamily A, 6
chr18	37952751	37958074	+	37842705	37958074	A5SS	0.03	50	50	ENSMUST00000195823.2	ENSMUSG00000103793.2	Pcdhga6	chr18	protein_coding	protocadherin gamma subfamily A, 6
chr18	37952765	37958074	+	37842705	37958074	A5SS	0.03	50	50	ENSMUST00000195823.2	ENSMUSG00000103793.2	Pcdhga6	chr18	protein_coding	protocadherin gamma subfamily A, 6
chr18	37955187	37958074	+	37842705	37958074	A5SS	0.03	50	50	ENSMUST00000195823.2	ENSMUSG00000103793.2	Pcdhga6	chr18	protein_coding	protocadherin gamma subfamily A, 6
chr18	37957247	37958074	+	37842705	37958074	A5SS	0.03	50	50	ENSMUST00000195823.2	ENSMUSG00000103793.2	Pcdhga6	chr18	protein_coding	protocadherin gamma subfamily A, 6
chr18	37957478	37958074	+	37842705	37958074	A5SS	0.03	50	50	ENSMUST00000195823.2	ENSMUSG00000103793.2	Pcdhga6	chr18	protein_coding	protocadherin gamma subfamily A, 6
chr18	37957609	37958074	+	37842705	37958074	A5SS	0.03	50	50	ENSMUST00000195823.2	ENSMUSG00000103793.2	Pcdhga6	chr18	protein_coding	protocadherin gamma subfamily A, 6
chr18	37957717	37958074	+	37842705	37958074	A5SS	0.03	50	50	ENSMUST00000195823.2	ENSMUSG00000103793.2	Pcdhga6	chr18	protein_coding	protocadherin gamma subfamily A, 6
chr18	37957905	37958074	+	37842705	37958074	A5SS	0.03	50	50	ENSMUST00000195823.2	ENSMUSG00000103793.2	Pcdhga6	chr18	protein_coding	protocadherin gamma subfamily A, 6
chr18	37855970	37958074	+	37850427	37958074	A5SS	0.03	50	50	ENSMUST00000192511.2	ENSMUSG00000103472.2	Pcdhga7	chr18	protein_coding	protocadherin gamma subfamily A, 7
chr18	37861369	37958074	+	37850427	37958074	A5SS	0.03	50	50	ENSMUST00000192511.2	ENSMUSG00000103472.2	Pcdhga7	chr18	protein_coding	protocadherin gamma subfamily A, 7
chr18	37866612	37958074	+	37850427	37958074	A5SS	0.03	50	50	ENSMUST00000192511.2	ENSMUSG00000103472.2	Pcdhga7	chr18	protein_coding	protocadherin gamma subfamily A, 7
chr18	37872596	37958074	+	37850427	37958074	A5SS	0.03	50	50	ENSMUST00000192511.2	ENSMUSG00000103472.2	Pcdhga7	chr18	protein_coding	protocadherin gamma subfamily A, 7
chr18	37877711	37958074	+	37850427	37958074	A5SS	0.03	50	50	ENSMUST00000192511.2	ENSMUSG00000103472.2	Pcdhga7	chr18	protein_coding	protocadherin gamma subfamily A, 7
chr18	37882658	37958074	+	37850427	37958074	A5SS	0.03	50	50	ENSMUST00000192511.2	ENSMUSG00000103472.2	Pcdhga7	chr18	protein_coding	protocadherin gamma subfamily A, 7
chr18	37887246	37958074	+	37850427	37958074	A5SS	0.03	50	50	ENSMUST00000192511.2	ENSMUSG00000103472.2	Pcdhga7	chr18	protein_coding	protocadherin gamma subfamily A, 7
chr18	37891420	37958074	+	37850427	37958074	A5SS	0.03	50	50	ENSMUST00000192511.2	ENSMUSG00000103472.2	Pcdhga7	chr18	protein_coding	protocadherin gamma subfamily A, 7
chr18	37897352	37958074	+	37850427	37958074	A5SS	0.03	50	50	ENSMUST00000192511.2	ENSMUSG00000103472.2	Pcdhga7	chr18	protein_coding	protocadherin gamma subfamily A, 7
chr18	37901593	37958074	+	37850427	37958074	A5SS	0.03	50	50	ENSMUST00000192511.2	ENSMUSG00000103472.2	Pcdhga7	chr18	protein_coding	protocadherin gamma subfamily A, 7
chr18	37942030	37958074	+	37850427	37958074	A5SS	0.03	50	50	ENSMUST00000192511.2	ENSMUSG00000103472.2	Pcdhga7	chr18	protein_coding	protocadherin gamma subfamily A, 7
chr18	37948606	37958074	+	37850427	37958074	A5SS	0.03	50	50	ENSMUST00000192511.2	ENSMUSG00000103472.2	Pcdhga7	chr18	protein_coding	protocadherin gamma subfamily A, 7
chr18	37951036	37958074	+	37850427	37958074	A5SS	0.03	50	50	ENSMUST00000192511.2	ENSMUSG00000103472.2	Pcdhga7	chr18	protein_coding	protocadherin gamma subfamily A, 7
chr18	37952751	37958074	+	37850427	37958074	A5SS	0.03	50	50	ENSMUST00000192511.2	ENSMUSG00000103472.2	Pcdhga7	chr18	protein_coding	protocadherin gamma subfamily A, 7
chr18	37952765	37958074	+	37850427	37958074	A5SS	0.03	50	50	ENSMUST00000192511.2	ENSMUSG00000103472.2	Pcdhga7	chr18	protein_coding	protocadherin gamma subfamily A, 7
chr18	37955187	37958074	+	37850427	37958074	A5SS	0.03	50	50	ENSMUST00000192511.2	ENSMUSG00000103472.2	Pcdhga7	chr18	protein_coding	protocadherin gamma subfamily A, 7
chr18	37957247	37958074	+	37850427	37958074	A5SS	0.03	50	50	ENSMUST00000192511.2	ENSMUSG00000103472.2	Pcdhga7	chr18	protein_coding	protocadherin gamma subfamily A, 7
chr18	37957478	37958074	+	37850427	37958074	A5SS	0.03	50	50	ENSMUST00000192511.2	ENSMUSG00000103472.2	Pcdhga7	chr18	protein_coding	protocadherin gamma subfamily A, 7
chr18	37957609	37958074	+	37850427	37958074	A5SS	0.03	50	50	ENSMUST00000192511.2	ENSMUSG00000103472.2	Pcdhga7	chr18	protein_coding	protocadherin gamma subfamily A, 7
chr18	37957717	37958074	+	37850427	37958074	A5SS	0.03	50	50	ENSMUST00000192511.2	ENSMUSG00000103472.2	Pcdhga7	chr18	protein_coding	protocadherin gamma subfamily A, 7
chr18	37957905	37958074	+	37850427	37958074	A5SS	0.03	50	50	ENSMUST00000192511.2	ENSMUSG00000103472.2	Pcdhga7	chr18	protein_coding	protocadherin gamma subfamily A, 7
chr18	37855970;37861369	37861262;37958074	+	37855970	37958074	cassetteExon	0.5	100	100	ENSMUST00000195363.2	ENSMUSG00000103585.2	Pcdhgb4	chr18	protein_coding	protocadherin gamma subfamily B, 4
chr18	37866612	37958074	+	37855970	37958074	A5SS	0.03	50	50	ENSMUST00000195363.2	ENSMUSG00000103585.2	Pcdhgb4	chr18	protein_coding	protocadherin gamma subfamily B, 4
chr18	37872596	37958074	+	37855970	37958074	A5SS	0.03	50	50	ENSMUST00000195363.2	ENSMUSG00000103585.2	Pcdhgb4	chr18	protein_coding	protocadherin gamma subfamily B, 4
chr18	37877711	37958074	+	37855970	37958074	A5SS	0.03	50	50	ENSMUST00000195363.2	ENSMUSG00000103585.2	Pcdhgb4	chr18	protein_coding	protocadherin gamma subfamily B, 4
chr18	37882658	37958074	+	37855970	37958074	A5SS	0.03	50	50	ENSMUST00000195363.2	ENSMUSG00000103585.2	Pcdhgb4	chr18	protein_coding	protocadherin gamma subfamily B, 4
chr18	37887246	37958074	+	37855970	37958074	A5SS	0.03	50	50	ENSMUST00000195363.2	ENSMUSG00000103585.2	Pcdhgb4	chr18	protein_coding	protocadherin gamma subfamily B, 4
chr18	37891420	37958074	+	37855970	37958074	A5SS	0.03	50	50	ENSMUST00000195363.2	ENSMUSG00000103585.2	Pcdhgb4	chr18	protein_coding	protocadherin gamma subfamily B, 4
chr18	37897352	37958074	+	37855970	37958074	A5SS	0.03	50	50	ENSMUST00000195363.2	ENSMUSG00000103585.2	Pcdhgb4	chr18	protein_coding	protocadherin gamma subfamily B, 4
chr18	37901593	37958074	+	37855970	37958074	A5SS	0.03	50	50	ENSMUST00000195363.2	ENSMUSG00000103585.2	Pcdhgb4	chr18	protein_coding	protocadherin gamma subfamily B, 4
chr18	37942030	37958074	+	37855970	37958074	A5SS	0.03	50	50	ENSMUST00000195363.2	ENSMUSG00000103585.2	Pcdhgb4	chr18	protein_coding	protocadherin gamma subfamily B, 4
chr18	37948606	37958074	+	37855970	37958074	A5SS	0.03	50	50	ENSMUST00000195363.2	ENSMUSG00000103585.2	Pcdhgb4	chr18	protein_coding	protocadherin gamma subfamily B, 4
chr18	37951036	37958074	+	37855970	37958074	A5SS	0.03	50	50	ENSMUST00000195363.2	ENSMUSG00000103585.2	Pcdhgb4	chr18	protein_coding	protocadherin gamma subfamily B, 4
chr18	37952751	37958074	+	37855970	37958074	A5SS	0.03	50	50	ENSMUST00000195363.2	ENSMUSG00000103585.2	Pcdhgb4	chr18	protein_coding	protocadherin gamma subfamily B, 4
chr18	37952765	37958074	+	37855970	37958074	A5SS	0.03	50	50	ENSMUST00000195363.2	ENSMUSG00000103585.2	Pcdhgb4	chr18	protein_coding	protocadherin gamma subfamily B, 4
chr18	37955187	37958074	+	37855970	37958074	A5SS	0.03	50	50	ENSMUST00000195363.2	ENSMUSG00000103585.2	Pcdhgb4	chr18	protein_coding	protocadherin gamma subfamily B, 4
chr18	37957247	37958074	+	37855970	37958074	A5SS	0.03	50	50	ENSMUST00000195363.2	ENSMUSG00000103585.2	Pcdhgb4	chr18	protein_coding	protocadherin gamma subfamily B, 4
chr18	37957478	37958074	+	37855970	37958074	A5SS	0.03	50	50	ENSMUST00000195363.2	ENSMUSG00000103585.2	Pcdhgb4	chr18	protein_coding	protocadherin gamma subfamily B, 4
chr18	37957609	37958074	+	37855970	37958074	A5SS	0.03	50	50	ENSMUST00000195363.2	ENSMUSG00000103585.2	Pcdhgb4	chr18	protein_coding	protocadherin gamma subfamily B, 4
chr18	37957717	37958074	+	37855970	37958074	A5SS	0.03	50	50	ENSMUST00000195363.2	ENSMUSG00000103585.2	Pcdhgb4	chr18	protein_coding	protocadherin gamma subfamily B, 4
chr18	37957905	37958074	+	37855970	37958074	A5SS	0.03	50	50	ENSMUST00000195363.2	ENSMUSG00000103585.2	Pcdhgb4	chr18	protein_coding	protocadherin gamma subfamily B, 4
chr18	37855970	37958074	+	37855970	37861262	3pMXE	0.5	50	50	ENSMUST00000195069.2	ENSMUSG00000103585.2	Pcdhgb4	chr18	protein_coding	protocadherin gamma subfamily B, 4
chr18	37855970	37958074	+	37861369	37958074	5pMXE	0.03	50	50	ENSMUST00000066149.9	ENSMUSG00000103897.2	Pcdhga8	chr18	protein_coding	protocadherin gamma subfamily A, 8
chr18	37866612	37958074	+	37861369	37958074	A5SS	0.03	50	50	ENSMUST00000066149.9	ENSMUSG00000103897.2	Pcdhga8	chr18	protein_coding	protocadherin gamma subfamily A, 8
chr18	37872596	37958074	+	37861369	37958074	A5SS	0.03	50	50	ENSMUST00000066149.9	ENSMUSG00000103897.2	Pcdhga8	chr18	protein_coding	protocadherin gamma subfamily A, 8
chr18	37877711	37958074	+	37861369	37958074	A5SS	0.03	50	50	ENSMUST00000066149.9	ENSMUSG00000103897.2	Pcdhga8	chr18	protein_coding	protocadherin gamma subfamily A, 8
chr18	37882658	37958074	+	37861369	37958074	A5SS	0.03	50	50	ENSMUST00000066149.9	ENSMUSG00000103897.2	Pcdhga8	chr18	protein_coding	protocadherin gamma subfamily A, 8
chr18	37887246	37958074	+	37861369	37958074	A5SS	0.03	50	50	ENSMUST00000066149.9	ENSMUSG00000103897.2	Pcdhga8	chr18	protein_coding	protocadherin gamma subfamily A, 8
chr18	37891420	37958074	+	37861369	37958074	A5SS	0.03	50	50	ENSMUST00000066149.9	ENSMUSG00000103897.2	Pcdhga8	chr18	protein_coding	protocadherin gamma subfamily A, 8
chr18	37897352	37958074	+	37861369	37958074	A5SS	0.03	50	50	ENSMUST00000066149.9	ENSMUSG00000103897.2	Pcdhga8	chr18	protein_coding	protocadherin gamma subfamily A, 8
chr18	37901593	37958074	+	37861369	37958074	A5SS	0.03	50	50	ENSMUST00000066149.9	ENSMUSG00000103897.2	Pcdhga8	chr18	protein_coding	protocadherin gamma subfamily A, 8
chr18	37942030	37958074	+	37861369	37958074	A5SS	0.03	50	50	ENSMUST00000066149.9	ENSMUSG00000103897.2	Pcdhga8	chr18	protein_coding	protocadherin gamma subfamily A, 8
chr18	37948606	37958074	+	37861369	37958074	A5SS	0.03	50	50	ENSMUST00000066149.9	ENSMUSG00000103897.2	Pcdhga8	chr18	protein_coding	protocadherin gamma subfamily A, 8
chr18	37951036	37958074	+	37861369	37958074	A5SS	0.03	50	50	ENSMUST00000066149.9	ENSMUSG00000103897.2	Pcdhga8	chr18	protein_coding	protocadherin gamma subfamily A, 8
chr18	37952751	37958074	+	37861369	37958074	A5SS	0.03	50	50	ENSMUST00000066149.9	ENSMUSG00000103897.2	Pcdhga8	chr18	protein_coding	protocadherin gamma subfamily A, 8
chr18	37952765	37958074	+	37861369	37958074	A5SS	0.03	50	50	ENSMUST00000066149.9	ENSMUSG00000103897.2	Pcdhga8	chr18	protein_coding	protocadherin gamma subfamily A, 8
chr18	37955187	37958074	+	37861369	37958074	A5SS	0.03	50	50	ENSMUST00000066149.9	ENSMUSG00000103897.2	Pcdhga8	chr18	protein_coding	protocadherin gamma subfamily A, 8
chr18	37957247	37958074	+	37861369	37958074	A5SS	0.03	50	50	ENSMUST00000066149.9	ENSMUSG00000103897.2	Pcdhga8	chr18	protein_coding	protocadherin gamma subfamily A, 8
chr18	37957478	37958074	+	37861369	37958074	A5SS	0.03	50	50	ENSMUST00000066149.9	ENSMUSG00000103897.2	Pcdhga8	chr18	protein_coding	protocadherin gamma subfamily A, 8
chr18	37957609	37958074	+	37861369	37958074	A5SS	0.03	50	50	ENSMUST00000066149.9	ENSMUSG00000103897.2	Pcdhga8	chr18	protein_coding	protocadherin gamma subfamily A, 8
chr18	37957717	37958074	+	37861369	37958074	A5SS	0.03	50	50	ENSMUST00000066149.9	ENSMUSG00000103897.2	Pcdhga8	chr18	protein_coding	protocadherin gamma subfamily A, 8
chr18	37957905	37958074	+	37861369	37958074	A5SS	0.03	50	50	ENSMUST00000066149.9	ENSMUSG00000103897.2	Pcdhga8	chr18	protein_coding	protocadherin gamma subfamily A, 8
chr18	37872596	37958074	+	37866612	37958074	A5SS	0.03	50	50	ENSMUST00000192535.2	ENSMUSG00000103749.2	Pcdhgb5	chr18	protein_coding	protocadherin gamma subfamily B, 5
chr18	37877711	37958074	+	37866612	37958074	A5SS	0.03	50	50	ENSMUST00000192535.2	ENSMUSG00000103749.2	Pcdhgb5	chr18	protein_coding	protocadherin gamma subfamily B, 5
chr18	37882658	37958074	+	37866612	37958074	A5SS	0.03	50	50	ENSMUST00000192535.2	ENSMUSG00000103749.2	Pcdhgb5	chr18	protein_coding	protocadherin gamma subfamily B, 5
chr18	37887246	37958074	+	37866612	37958074	A5SS	0.03	50	50	ENSMUST00000192535.2	ENSMUSG00000103749.2	Pcdhgb5	chr18	protein_coding	protocadherin gamma subfamily B, 5
chr18	37891420	37958074	+	37866612	37958074	A5SS	0.03	50	50	ENSMUST00000192535.2	ENSMUSG00000103749.2	Pcdhgb5	chr18	protein_coding	protocadherin gamma subfamily B, 5
chr18	37897352	37958074	+	37866612	37958074	A5SS	0.03	50	50	ENSMUST00000192535.2	ENSMUSG00000103749.2	Pcdhgb5	chr18	protein_coding	protocadherin gamma subfamily B, 5
chr18	37901593	37958074	+	37866612	37958074	A5SS	0.03	50	50	ENSMUST00000192535.2	ENSMUSG00000103749.2	Pcdhgb5	chr18	protein_coding	protocadherin gamma subfamily B, 5
chr18	37942030	37958074	+	37866612	37958074	A5SS	0.03	50	50	ENSMUST00000192535.2	ENSMUSG00000103749.2	Pcdhgb5	chr18	protein_coding	protocadherin gamma subfamily B, 5
chr18	37948606	37958074	+	37866612	37958074	A5SS	0.03	50	50	ENSMUST00000192535.2	ENSMUSG00000103749.2	Pcdhgb5	chr18	protein_coding	protocadherin gamma subfamily B, 5
chr18	37951036	37958074	+	37866612	37958074	A5SS	0.03	50	50	ENSMUST00000192535.2	ENSMUSG00000103749.2	Pcdhgb5	chr18	protein_coding	protocadherin gamma subfamily B, 5
chr18	37952751	37958074	+	37866612	37958074	A5SS	0.03	50	50	ENSMUST00000192535.2	ENSMUSG00000103749.2	Pcdhgb5	chr18	protein_coding	protocadherin gamma subfamily B, 5
chr18	37952765	37958074	+	37866612	37958074	A5SS	0.03	50	50	ENSMUST00000192535.2	ENSMUSG00000103749.2	Pcdhgb5	chr18	protein_coding	protocadherin gamma subfamily B, 5
chr18	37955187	37958074	+	37866612	37958074	A5SS	0.03	50	50	ENSMUST00000192535.2	ENSMUSG00000103749.2	Pcdhgb5	chr18	protein_coding	protocadherin gamma subfamily B, 5
chr18	37957247	37958074	+	37866612	37958074	A5SS	0.03	50	50	ENSMUST00000192535.2	ENSMUSG00000103749.2	Pcdhgb5	chr18	protein_coding	protocadherin gamma subfamily B, 5
chr18	37957478	37958074	+	37866612	37958074	A5SS	0.03	50	50	ENSMUST00000192535.2	ENSMUSG00000103749.2	Pcdhgb5	chr18	protein_coding	protocadherin gamma subfamily B, 5
chr18	37957609	37958074	+	37866612	37958074	A5SS	0.03	50	50	ENSMUST00000192535.2	ENSMUSG00000103749.2	Pcdhgb5	chr18	protein_coding	protocadherin gamma subfamily B, 5
chr18	37957717	37958074	+	37866612	37958074	A5SS	0.03	50	50	ENSMUST00000192535.2	ENSMUSG00000103749.2	Pcdhgb5	chr18	protein_coding	protocadherin gamma subfamily B, 5
chr18	37957905	37958074	+	37866612	37958074	A5SS	0.03	50	50	ENSMUST00000192535.2	ENSMUSG00000103749.2	Pcdhgb5	chr18	protein_coding	protocadherin gamma subfamily B, 5
chr18	37877711	37958074	+	37872596	37958074	A5SS	0.03	50	50	ENSMUST00000091935.7	ENSMUSG00000102440.2	Pcdhga9	chr18	protein_coding	protocadherin gamma subfamily A, 9
chr18	37882658	37958074	+	37872596	37958074	A5SS	0.03	50	50	ENSMUST00000091935.7	ENSMUSG00000102440.2	Pcdhga9	chr18	protein_coding	protocadherin gamma subfamily A, 9
chr18	37887246	37958074	+	37872596	37958074	A5SS	0.03	50	50	ENSMUST00000091935.7	ENSMUSG00000102440.2	Pcdhga9	chr18	protein_coding	protocadherin gamma subfamily A, 9
chr18	37891420	37958074	+	37872596	37958074	A5SS	0.03	50	50	ENSMUST00000091935.7	ENSMUSG00000102440.2	Pcdhga9	chr18	protein_coding	protocadherin gamma subfamily A, 9
chr18	37897352	37958074	+	37872596	37958074	A5SS	0.03	50	50	ENSMUST00000091935.7	ENSMUSG00000102440.2	Pcdhga9	chr18	protein_coding	protocadherin gamma subfamily A, 9
chr18	37901593	37958074	+	37872596	37958074	A5SS	0.03	50	50	ENSMUST00000091935.7	ENSMUSG00000102440.2	Pcdhga9	chr18	protein_coding	protocadherin gamma subfamily A, 9
chr18	37942030	37958074	+	37872596	37958074	A5SS	0.03	50	50	ENSMUST00000091935.7	ENSMUSG00000102440.2	Pcdhga9	chr18	protein_coding	protocadherin gamma subfamily A, 9
chr18	37948606	37958074	+	37872596	37958074	A5SS	0.03	50	50	ENSMUST00000091935.7	ENSMUSG00000102440.2	Pcdhga9	chr18	protein_coding	protocadherin gamma subfamily A, 9
chr18	37951036	37958074	+	37872596	37958074	A5SS	0.03	50	50	ENSMUST00000091935.7	ENSMUSG00000102440.2	Pcdhga9	chr18	protein_coding	protocadherin gamma subfamily A, 9
chr18	37952751	37958074	+	37872596	37958074	A5SS	0.03	50	50	ENSMUST00000091935.7	ENSMUSG00000102440.2	Pcdhga9	chr18	protein_coding	protocadherin gamma subfamily A, 9
chr18	37952765	37958074	+	37872596	37958074	A5SS	0.03	50	50	ENSMUST00000091935.7	ENSMUSG00000102440.2	Pcdhga9	chr18	protein_coding	protocadherin gamma subfamily A, 9
chr18	37955187	37958074	+	37872596	37958074	A5SS	0.03	50	50	ENSMUST00000091935.7	ENSMUSG00000102440.2	Pcdhga9	chr18	protein_coding	protocadherin gamma subfamily A, 9
chr18	37957247	37958074	+	37872596	37958074	A5SS	0.03	50	50	ENSMUST00000091935.7	ENSMUSG00000102440.2	Pcdhga9	chr18	protein_coding	protocadherin gamma subfamily A, 9
chr18	37957478	37958074	+	37872596	37958074	A5SS	0.03	50	50	ENSMUST00000091935.7	ENSMUSG00000102440.2	Pcdhga9	chr18	protein_coding	protocadherin gamma subfamily A, 9
chr18	37957609	37958074	+	37872596	37958074	A5SS	0.03	50	50	ENSMUST00000091935.7	ENSMUSG00000102440.2	Pcdhga9	chr18	protein_coding	protocadherin gamma subfamily A, 9
chr18	37957717	37958074	+	37872596	37958074	A5SS	0.03	50	50	ENSMUST00000091935.7	ENSMUSG00000102440.2	Pcdhga9	chr18	protein_coding	protocadherin gamma subfamily A, 9
chr18	37957905	37958074	+	37872596	37958074	A5SS	0.03	50	50	ENSMUST00000091935.7	ENSMUSG00000102440.2	Pcdhga9	chr18	protein_coding	protocadherin gamma subfamily A, 9
chr18	37882658	37958074	+	37877711	37958074	A5SS	0.03	50	50	ENSMUST00000003599.9	ENSMUSG00000103088.2	Pcdhgb6	chr18	protein_coding	protocadherin gamma subfamily B, 6
chr18	37887246	37958074	+	37877711	37958074	A5SS	0.03	50	50	ENSMUST00000003599.9	ENSMUSG00000103088.2	Pcdhgb6	chr18	protein_coding	protocadherin gamma subfamily B, 6
chr18	37891420	37958074	+	37877711	37958074	A5SS	0.03	50	50	ENSMUST00000003599.9	ENSMUSG00000103088.2	Pcdhgb6	chr18	protein_coding	protocadherin gamma subfamily B, 6
chr18	37897352	37958074	+	37877711	37958074	A5SS	0.03	50	50	ENSMUST00000003599.9	ENSMUSG00000103088.2	Pcdhgb6	chr18	protein_coding	protocadherin gamma subfamily B, 6
chr18	37901593	37958074	+	37877711	37958074	A5SS	0.03	50	50	ENSMUST00000003599.9	ENSMUSG00000103088.2	Pcdhgb6	chr18	protein_coding	protocadherin gamma subfamily B, 6
chr18	37942030	37958074	+	37877711	37958074	A5SS	0.03	50	50	ENSMUST00000003599.9	ENSMUSG00000103088.2	Pcdhgb6	chr18	protein_coding	protocadherin gamma subfamily B, 6
chr18	37948606	37958074	+	37877711	37958074	A5SS	0.03	50	50	ENSMUST00000003599.9	ENSMUSG00000103088.2	Pcdhgb6	chr18	protein_coding	protocadherin gamma subfamily B, 6
chr18	37951036	37958074	+	37877711	37958074	A5SS	0.03	50	50	ENSMUST00000003599.9	ENSMUSG00000103088.2	Pcdhgb6	chr18	protein_coding	protocadherin gamma subfamily B, 6
chr18	37952751	37958074	+	37877711	37958074	A5SS	0.03	50	50	ENSMUST00000003599.9	ENSMUSG00000103088.2	Pcdhgb6	chr18	protein_coding	protocadherin gamma subfamily B, 6
chr18	37952765	37958074	+	37877711	37958074	A5SS	0.03	50	50	ENSMUST00000003599.9	ENSMUSG00000103088.2	Pcdhgb6	chr18	protein_coding	protocadherin gamma subfamily B, 6
chr18	37955187	37958074	+	37877711	37958074	A5SS	0.03	50	50	ENSMUST00000003599.9	ENSMUSG00000103088.2	Pcdhgb6	chr18	protein_coding	protocadherin gamma subfamily B, 6
chr18	37957247	37958074	+	37877711	37958074	A5SS	0.03	50	50	ENSMUST00000003599.9	ENSMUSG00000103088.2	Pcdhgb6	chr18	protein_coding	protocadherin gamma subfamily B, 6
chr18	37957478	37958074	+	37877711	37958074	A5SS	0.03	50	50	ENSMUST00000003599.9	ENSMUSG00000103088.2	Pcdhgb6	chr18	protein_coding	protocadherin gamma subfamily B, 6
chr18	37957609	37958074	+	37877711	37958074	A5SS	0.03	50	50	ENSMUST00000003599.9	ENSMUSG00000103088.2	Pcdhgb6	chr18	protein_coding	protocadherin gamma subfamily B, 6
chr18	37957717	37958074	+	37877711	37958074	A5SS	0.03	50	50	ENSMUST00000003599.9	ENSMUSG00000103088.2	Pcdhgb6	chr18	protein_coding	protocadherin gamma subfamily B, 6
chr18	37957905	37958074	+	37877711	37958074	A5SS	0.03	50	50	ENSMUST00000003599.9	ENSMUSG00000103088.2	Pcdhgb6	chr18	protein_coding	protocadherin gamma subfamily B, 6
chr18	37890164	37900988	-	37890164	37900481	5pMXE	0.5	50	50	ENSMUST00000192501.2	ENSMUSG00000097330.3	Gm26672	chr18	lncRNA	predicted gene, 26672
chr18	37887246	37958074	+	37882658	37958074	A5SS	0.03	50	50	ENSMUST00000193404.2	ENSMUSG00000102222.2	Pcdhga10	chr18	protein_coding	protocadherin gamma subfamily A, 10
chr18	37891420	37958074	+	37882658	37958074	A5SS	0.03	50	50	ENSMUST00000193404.2	ENSMUSG00000102222.2	Pcdhga10	chr18	protein_coding	protocadherin gamma subfamily A, 10
chr18	37897352	37958074	+	37882658	37958074	A5SS	0.03	50	50	ENSMUST00000193404.2	ENSMUSG00000102222.2	Pcdhga10	chr18	protein_coding	protocadherin gamma subfamily A, 10
chr18	37901593	37958074	+	37882658	37958074	A5SS	0.03	50	50	ENSMUST00000193404.2	ENSMUSG00000102222.2	Pcdhga10	chr18	protein_coding	protocadherin gamma subfamily A, 10
chr18	37942030	37958074	+	37882658	37958074	A5SS	0.03	50	50	ENSMUST00000193404.2	ENSMUSG00000102222.2	Pcdhga10	chr18	protein_coding	protocadherin gamma subfamily A, 10
chr18	37948606	37958074	+	37882658	37958074	A5SS	0.03	50	50	ENSMUST00000193404.2	ENSMUSG00000102222.2	Pcdhga10	chr18	protein_coding	protocadherin gamma subfamily A, 10
chr18	37951036	37958074	+	37882658	37958074	A5SS	0.03	50	50	ENSMUST00000193404.2	ENSMUSG00000102222.2	Pcdhga10	chr18	protein_coding	protocadherin gamma subfamily A, 10
chr18	37952751	37958074	+	37882658	37958074	A5SS	0.03	50	50	ENSMUST00000193404.2	ENSMUSG00000102222.2	Pcdhga10	chr18	protein_coding	protocadherin gamma subfamily A, 10
chr18	37952765	37958074	+	37882658	37958074	A5SS	0.03	50	50	ENSMUST00000193404.2	ENSMUSG00000102222.2	Pcdhga10	chr18	protein_coding	protocadherin gamma subfamily A, 10
chr18	37955187	37958074	+	37882658	37958074	A5SS	0.03	50	50	ENSMUST00000193404.2	ENSMUSG00000102222.2	Pcdhga10	chr18	protein_coding	protocadherin gamma subfamily A, 10
chr18	37957247	37958074	+	37882658	37958074	A5SS	0.03	50	50	ENSMUST00000193404.2	ENSMUSG00000102222.2	Pcdhga10	chr18	protein_coding	protocadherin gamma subfamily A, 10
chr18	37957478	37958074	+	37882658	37958074	A5SS	0.03	50	50	ENSMUST00000193404.2	ENSMUSG00000102222.2	Pcdhga10	chr18	protein_coding	protocadherin gamma subfamily A, 10
chr18	37957609	37958074	+	37882658	37958074	A5SS	0.03	50	50	ENSMUST00000193404.2	ENSMUSG00000102222.2	Pcdhga10	chr18	protein_coding	protocadherin gamma subfamily A, 10
chr18	37957717	37958074	+	37882658	37958074	A5SS	0.03	50	50	ENSMUST00000193404.2	ENSMUSG00000102222.2	Pcdhga10	chr18	protein_coding	protocadherin gamma subfamily A, 10
chr18	37957905	37958074	+	37882658	37958074	A5SS	0.03	50	50	ENSMUST00000193404.2	ENSMUSG00000102222.2	Pcdhga10	chr18	protein_coding	protocadherin gamma subfamily A, 10
chr18	37891420	37958074	+	37887246	37958074	A5SS	0.03	50	50	ENSMUST00000194928.2	ENSMUSG00000104063.2	Pcdhgb7	chr18	protein_coding	protocadherin gamma subfamily B, 7
chr18	37897352	37958074	+	37887246	37958074	A5SS	0.03	50	50	ENSMUST00000194928.2	ENSMUSG00000104063.2	Pcdhgb7	chr18	protein_coding	protocadherin gamma subfamily B, 7
chr18	37901593	37958074	+	37887246	37958074	A5SS	0.03	50	50	ENSMUST00000194928.2	ENSMUSG00000104063.2	Pcdhgb7	chr18	protein_coding	protocadherin gamma subfamily B, 7
chr18	37942030	37958074	+	37887246	37958074	A5SS	0.03	50	50	ENSMUST00000194928.2	ENSMUSG00000104063.2	Pcdhgb7	chr18	protein_coding	protocadherin gamma subfamily B, 7
chr18	37948606	37958074	+	37887246	37958074	A5SS	0.03	50	50	ENSMUST00000194928.2	ENSMUSG00000104063.2	Pcdhgb7	chr18	protein_coding	protocadherin gamma subfamily B, 7
chr18	37951036	37958074	+	37887246	37958074	A5SS	0.03	50	50	ENSMUST00000194928.2	ENSMUSG00000104063.2	Pcdhgb7	chr18	protein_coding	protocadherin gamma subfamily B, 7
chr18	37952751	37958074	+	37887246	37958074	A5SS	0.03	50	50	ENSMUST00000194928.2	ENSMUSG00000104063.2	Pcdhgb7	chr18	protein_coding	protocadherin gamma subfamily B, 7
chr18	37952765	37958074	+	37887246	37958074	A5SS	0.03	50	50	ENSMUST00000194928.2	ENSMUSG00000104063.2	Pcdhgb7	chr18	protein_coding	protocadherin gamma subfamily B, 7
chr18	37955187	37958074	+	37887246	37958074	A5SS	0.03	50	50	ENSMUST00000194928.2	ENSMUSG00000104063.2	Pcdhgb7	chr18	protein_coding	protocadherin gamma subfamily B, 7
chr18	37957247	37958074	+	37887246	37958074	A5SS	0.03	50	50	ENSMUST00000194928.2	ENSMUSG00000104063.2	Pcdhgb7	chr18	protein_coding	protocadherin gamma subfamily B, 7
chr18	37957478	37958074	+	37887246	37958074	A5SS	0.03	50	50	ENSMUST00000194928.2	ENSMUSG00000104063.2	Pcdhgb7	chr18	protein_coding	protocadherin gamma subfamily B, 7
chr18	37957609	37958074	+	37887246	37958074	A5SS	0.03	50	50	ENSMUST00000194928.2	ENSMUSG00000104063.2	Pcdhgb7	chr18	protein_coding	protocadherin gamma subfamily B, 7
chr18	37957717	37958074	+	37887246	37958074	A5SS	0.03	50	50	ENSMUST00000194928.2	ENSMUSG00000104063.2	Pcdhgb7	chr18	protein_coding	protocadherin gamma subfamily B, 7
chr18	37957905	37958074	+	37887246	37958074	A5SS	0.03	50	50	ENSMUST00000194928.2	ENSMUSG00000104063.2	Pcdhgb7	chr18	protein_coding	protocadherin gamma subfamily B, 7
chr18	37897352	37958074	+	37891420	37958074	A5SS	0.03	50	50	ENSMUST00000061279.10	ENSMUSG00000102742.2	Pcdhga11	chr18	protein_coding	protocadherin gamma subfamily A, 11
chr18	37901593	37958074	+	37891420	37958074	A5SS	0.03	50	50	ENSMUST00000061279.10	ENSMUSG00000102742.2	Pcdhga11	chr18	protein_coding	protocadherin gamma subfamily A, 11
chr18	37942030	37958074	+	37891420	37958074	A5SS	0.03	50	50	ENSMUST00000061279.10	ENSMUSG00000102742.2	Pcdhga11	chr18	protein_coding	protocadherin gamma subfamily A, 11
chr18	37948606	37958074	+	37891420	37958074	A5SS	0.03	50	50	ENSMUST00000061279.10	ENSMUSG00000102742.2	Pcdhga11	chr18	protein_coding	protocadherin gamma subfamily A, 11
chr18	37951036	37958074	+	37891420	37958074	A5SS	0.03	50	50	ENSMUST00000061279.10	ENSMUSG00000102742.2	Pcdhga11	chr18	protein_coding	protocadherin gamma subfamily A, 11
chr18	37952751	37958074	+	37891420	37958074	A5SS	0.03	50	50	ENSMUST00000061279.10	ENSMUSG00000102742.2	Pcdhga11	chr18	protein_coding	protocadherin gamma subfamily A, 11
chr18	37952765	37958074	+	37891420	37958074	A5SS	0.03	50	50	ENSMUST00000061279.10	ENSMUSG00000102742.2	Pcdhga11	chr18	protein_coding	protocadherin gamma subfamily A, 11
chr18	37955187	37958074	+	37891420	37958074	A5SS	0.03	50	50	ENSMUST00000061279.10	ENSMUSG00000102742.2	Pcdhga11	chr18	protein_coding	protocadherin gamma subfamily A, 11
chr18	37957247	37958074	+	37891420	37958074	A5SS	0.03	50	50	ENSMUST00000061279.10	ENSMUSG00000102742.2	Pcdhga11	chr18	protein_coding	protocadherin gamma subfamily A, 11
chr18	37957478	37958074	+	37891420	37958074	A5SS	0.03	50	50	ENSMUST00000061279.10	ENSMUSG00000102742.2	Pcdhga11	chr18	protein_coding	protocadherin gamma subfamily A, 11
chr18	37957609	37958074	+	37891420	37958074	A5SS	0.03	50	50	ENSMUST00000061279.10	ENSMUSG00000102742.2	Pcdhga11	chr18	protein_coding	protocadherin gamma subfamily A, 11
chr18	37957717	37958074	+	37891420	37958074	A5SS	0.03	50	50	ENSMUST00000061279.10	ENSMUSG00000102742.2	Pcdhga11	chr18	protein_coding	protocadherin gamma subfamily A, 11
chr18	37957905	37958074	+	37891420	37958074	A5SS	0.03	50	50	ENSMUST00000061279.10	ENSMUSG00000102742.2	Pcdhga11	chr18	protein_coding	protocadherin gamma subfamily A, 11
chr18	37901593	37958074	+	37897352	37958074	A5SS	0.03	50	50	ENSMUST00000195764.2	ENSMUSG00000103081.4	Pcdhgb8	chr18	polymorphic_pseudogene	protocadherin gamma subfamily B, 8
chr18	37942030	37958074	+	37897352	37958074	A5SS	0.03	50	50	ENSMUST00000195764.2	ENSMUSG00000103081.4	Pcdhgb8	chr18	polymorphic_pseudogene	protocadherin gamma subfamily B, 8
chr18	37948606	37958074	+	37897352	37958074	A5SS	0.03	50	50	ENSMUST00000195764.2	ENSMUSG00000103081.4	Pcdhgb8	chr18	polymorphic_pseudogene	protocadherin gamma subfamily B, 8
chr18	37951036	37958074	+	37897352	37958074	A5SS	0.03	50	50	ENSMUST00000195764.2	ENSMUSG00000103081.4	Pcdhgb8	chr18	polymorphic_pseudogene	protocadherin gamma subfamily B, 8
chr18	37952751	37958074	+	37897352	37958074	A5SS	0.03	50	50	ENSMUST00000195764.2	ENSMUSG00000103081.4	Pcdhgb8	chr18	polymorphic_pseudogene	protocadherin gamma subfamily B, 8
chr18	37952765	37958074	+	37897352	37958074	A5SS	0.03	50	50	ENSMUST00000195764.2	ENSMUSG00000103081.4	Pcdhgb8	chr18	polymorphic_pseudogene	protocadherin gamma subfamily B, 8
chr18	37955187	37958074	+	37897352	37958074	A5SS	0.03	50	50	ENSMUST00000195764.2	ENSMUSG00000103081.4	Pcdhgb8	chr18	polymorphic_pseudogene	protocadherin gamma subfamily B, 8
chr18	37957247	37958074	+	37897352	37958074	A5SS	0.03	50	50	ENSMUST00000195764.2	ENSMUSG00000103081.4	Pcdhgb8	chr18	polymorphic_pseudogene	protocadherin gamma subfamily B, 8
chr18	37957478	37958074	+	37897352	37958074	A5SS	0.03	50	50	ENSMUST00000195764.2	ENSMUSG00000103081.4	Pcdhgb8	chr18	polymorphic_pseudogene	protocadherin gamma subfamily B, 8
chr18	37957609	37958074	+	37897352	37958074	A5SS	0.03	50	50	ENSMUST00000195764.2	ENSMUSG00000103081.4	Pcdhgb8	chr18	polymorphic_pseudogene	protocadherin gamma subfamily B, 8
chr18	37957717	37958074	+	37897352	37958074	A5SS	0.03	50	50	ENSMUST00000195764.2	ENSMUSG00000103081.4	Pcdhgb8	chr18	polymorphic_pseudogene	protocadherin gamma subfamily B, 8
chr18	37957905	37958074	+	37897352	37958074	A5SS	0.03	50	50	ENSMUST00000195764.2	ENSMUSG00000103081.4	Pcdhgb8	chr18	polymorphic_pseudogene	protocadherin gamma subfamily B, 8
chr18	37942030	37958074	+	37901593	37958074	A5SS	0.03	50	50	ENSMUST00000044851.8	ENSMUSG00000102428.2	Pcdhga12	chr18	protein_coding	protocadherin gamma subfamily A, 12
chr18	37948606	37958074	+	37901593	37958074	A5SS	0.03	50	50	ENSMUST00000044851.8	ENSMUSG00000102428.2	Pcdhga12	chr18	protein_coding	protocadherin gamma subfamily A, 12
chr18	37951036	37958074	+	37901593	37958074	A5SS	0.03	50	50	ENSMUST00000044851.8	ENSMUSG00000102428.2	Pcdhga12	chr18	protein_coding	protocadherin gamma subfamily A, 12
chr18	37952751	37958074	+	37901593	37958074	A5SS	0.03	50	50	ENSMUST00000044851.8	ENSMUSG00000102428.2	Pcdhga12	chr18	protein_coding	protocadherin gamma subfamily A, 12
chr18	37952765	37958074	+	37901593	37958074	A5SS	0.03	50	50	ENSMUST00000044851.8	ENSMUSG00000102428.2	Pcdhga12	chr18	protein_coding	protocadherin gamma subfamily A, 12
chr18	37955187	37958074	+	37901593	37958074	A5SS	0.03	50	50	ENSMUST00000044851.8	ENSMUSG00000102428.2	Pcdhga12	chr18	protein_coding	protocadherin gamma subfamily A, 12
chr18	37957247	37958074	+	37901593	37958074	A5SS	0.03	50	50	ENSMUST00000044851.8	ENSMUSG00000102428.2	Pcdhga12	chr18	protein_coding	protocadherin gamma subfamily A, 12
chr18	37957478	37958074	+	37901593	37958074	A5SS	0.03	50	50	ENSMUST00000044851.8	ENSMUSG00000102428.2	Pcdhga12	chr18	protein_coding	protocadherin gamma subfamily A, 12
chr18	37957609	37958074	+	37901593	37958074	A5SS	0.03	50	50	ENSMUST00000044851.8	ENSMUSG00000102428.2	Pcdhga12	chr18	protein_coding	protocadherin gamma subfamily A, 12
chr18	37957717	37958074	+	37901593	37958074	A5SS	0.03	50	50	ENSMUST00000044851.8	ENSMUSG00000102428.2	Pcdhga12	chr18	protein_coding	protocadherin gamma subfamily A, 12
chr18	37957905	37958074	+	37901593	37958074	A5SS	0.03	50	50	ENSMUST00000044851.8	ENSMUSG00000102428.2	Pcdhga12	chr18	protein_coding	protocadherin gamma subfamily A, 12
chr18	37948606	37958074	+	37942030	37958074	A5SS	0.03	50	50	ENSMUST00000076807.7	ENSMUSG00000102918.2	Pcdhgc3	chr18	protein_coding	protocadherin gamma subfamily C, 3
chr18	37951036	37958074	+	37942030	37958074	A5SS	0.03	50	50	ENSMUST00000076807.7	ENSMUSG00000102918.2	Pcdhgc3	chr18	protein_coding	protocadherin gamma subfamily C, 3
chr18	37952751	37958074	+	37942030	37958074	A5SS	0.03	50	50	ENSMUST00000076807.7	ENSMUSG00000102918.2	Pcdhgc3	chr18	protein_coding	protocadherin gamma subfamily C, 3
chr18	37952765	37958074	+	37942030	37958074	A5SS	0.03	50	50	ENSMUST00000076807.7	ENSMUSG00000102918.2	Pcdhgc3	chr18	protein_coding	protocadherin gamma subfamily C, 3
chr18	37955187	37958074	+	37942030	37958074	A5SS	0.03	50	50	ENSMUST00000076807.7	ENSMUSG00000102918.2	Pcdhgc3	chr18	protein_coding	protocadherin gamma subfamily C, 3
chr18	37957247	37958074	+	37942030	37958074	A5SS	0.03	50	50	ENSMUST00000076807.7	ENSMUSG00000102918.2	Pcdhgc3	chr18	protein_coding	protocadherin gamma subfamily C, 3
chr18	37957478	37958074	+	37942030	37958074	A5SS	0.03	50	50	ENSMUST00000076807.7	ENSMUSG00000102918.2	Pcdhgc3	chr18	protein_coding	protocadherin gamma subfamily C, 3
chr18	37957609	37958074	+	37942030	37958074	A5SS	0.03	50	50	ENSMUST00000076807.7	ENSMUSG00000102918.2	Pcdhgc3	chr18	protein_coding	protocadherin gamma subfamily C, 3
chr18	37957717	37958074	+	37942030	37958074	A5SS	0.03	50	50	ENSMUST00000076807.7	ENSMUSG00000102918.2	Pcdhgc3	chr18	protein_coding	protocadherin gamma subfamily C, 3
chr18	37957905	37958074	+	37942030	37958074	A5SS	0.03	50	50	ENSMUST00000076807.7	ENSMUSG00000102918.2	Pcdhgc3	chr18	protein_coding	protocadherin gamma subfamily C, 3
chr18	37948606	37958074	+	37951036	37958074	A5SS	0.03	50	50	ENSMUST00000066140.13	ENSMUSG00000023036.15	Pcdhgc4	chr18	protein_coding	protocadherin gamma subfamily C, 4
chr18	37952751	37958074	+	37951036	37958074	A5SS	0.03	50	50	ENSMUST00000066140.13	ENSMUSG00000023036.15	Pcdhgc4	chr18	protein_coding	protocadherin gamma subfamily C, 4
chr18	37952765	37958074	+	37951036	37958074	A5SS	0.03	50	50	ENSMUST00000066140.13	ENSMUSG00000023036.15	Pcdhgc4	chr18	protein_coding	protocadherin gamma subfamily C, 4
chr18	37955187	37958074	+	37951036	37958074	A5SS	0.03	50	50	ENSMUST00000066140.13	ENSMUSG00000023036.15	Pcdhgc4	chr18	protein_coding	protocadherin gamma subfamily C, 4
chr18	37957247	37958074	+	37951036	37958074	A5SS	0.03	50	50	ENSMUST00000066140.13	ENSMUSG00000023036.15	Pcdhgc4	chr18	protein_coding	protocadherin gamma subfamily C, 4
chr18	37957478	37958074	+	37951036	37958074	A5SS	0.03	50	50	ENSMUST00000066140.13	ENSMUSG00000023036.15	Pcdhgc4	chr18	protein_coding	protocadherin gamma subfamily C, 4
chr18	37957609	37958074	+	37951036	37958074	A5SS	0.03	50	50	ENSMUST00000066140.13	ENSMUSG00000023036.15	Pcdhgc4	chr18	protein_coding	protocadherin gamma subfamily C, 4
chr18	37957717	37958074	+	37951036	37958074	A5SS	0.03	50	50	ENSMUST00000066140.13	ENSMUSG00000023036.15	Pcdhgc4	chr18	protein_coding	protocadherin gamma subfamily C, 4
chr18	37957905	37958074	+	37951036	37958074	A5SS	0.03	50	50	ENSMUST00000066140.13	ENSMUSG00000023036.15	Pcdhgc4	chr18	protein_coding	protocadherin gamma subfamily C, 4
chr18	37952751	37958074	+	37948606	37958074	A5SS	0.03	50	50	ENSMUST00000195239.2	ENSMUSG00000023036.15	Pcdhgc4	chr18	protein_coding	protocadherin gamma subfamily C, 4
chr18	37952765	37958074	+	37948606	37958074	A5SS	0.03	50	50	ENSMUST00000195239.2	ENSMUSG00000023036.15	Pcdhgc4	chr18	protein_coding	protocadherin gamma subfamily C, 4
chr18	37955187	37958074	+	37948606	37958074	A5SS	0.03	50	50	ENSMUST00000195239.2	ENSMUSG00000023036.15	Pcdhgc4	chr18	protein_coding	protocadherin gamma subfamily C, 4
chr18	37957247	37958074	+	37948606	37958074	A5SS	0.03	50	50	ENSMUST00000195239.2	ENSMUSG00000023036.15	Pcdhgc4	chr18	protein_coding	protocadherin gamma subfamily C, 4
chr18	37957478	37958074	+	37948606	37958074	A5SS	0.03	50	50	ENSMUST00000195239.2	ENSMUSG00000023036.15	Pcdhgc4	chr18	protein_coding	protocadherin gamma subfamily C, 4
chr18	37957609	37958074	+	37948606	37958074	A5SS	0.03	50	50	ENSMUST00000195239.2	ENSMUSG00000023036.15	Pcdhgc4	chr18	protein_coding	protocadherin gamma subfamily C, 4
chr18	37957717	37958074	+	37948606	37958074	A5SS	0.03	50	50	ENSMUST00000195239.2	ENSMUSG00000023036.15	Pcdhgc4	chr18	protein_coding	protocadherin gamma subfamily C, 4
chr18	37957905	37958074	+	37948606	37958074	A5SS	0.03	50	50	ENSMUST00000195239.2	ENSMUSG00000023036.15	Pcdhgc4	chr18	protein_coding	protocadherin gamma subfamily C, 4
chr18	37952751	37958074	+	37955187	37958074	A5SS	0.03	50	50	ENSMUST00000055935.11	ENSMUSG00000102543.6	Pcdhgc5	chr18	protein_coding	protocadherin gamma subfamily C, 5
chr18	37952765	37958074	+	37955187	37958074	A5SS	0.03	50	50	ENSMUST00000055935.11	ENSMUSG00000102543.6	Pcdhgc5	chr18	protein_coding	protocadherin gamma subfamily C, 5
chr18	37957247	37958074	+	37955187	37958074	A5SS	0.03	50	50	ENSMUST00000055935.11	ENSMUSG00000102543.6	Pcdhgc5	chr18	protein_coding	protocadherin gamma subfamily C, 5
chr18	37957478	37958074	+	37955187	37958074	A5SS	0.03	50	50	ENSMUST00000055935.11	ENSMUSG00000102543.6	Pcdhgc5	chr18	protein_coding	protocadherin gamma subfamily C, 5
chr18	37957609	37958074	+	37955187	37958074	A5SS	0.03	50	50	ENSMUST00000055935.11	ENSMUSG00000102543.6	Pcdhgc5	chr18	protein_coding	protocadherin gamma subfamily C, 5
chr18	37957717	37958074	+	37955187	37958074	A5SS	0.03	50	50	ENSMUST00000055935.11	ENSMUSG00000102543.6	Pcdhgc5	chr18	protein_coding	protocadherin gamma subfamily C, 5
chr18	37957905	37958074	+	37955187	37958074	A5SS	0.03	50	50	ENSMUST00000055935.11	ENSMUSG00000102543.6	Pcdhgc5	chr18	protein_coding	protocadherin gamma subfamily C, 5
chr18	37952765	37958074	+	37952751	37958074	A5SS	0.03	50	50	ENSMUST00000193890.2	ENSMUSG00000102543.6	Pcdhgc5	chr18	protein_coding	protocadherin gamma subfamily C, 5
chr18	37957247	37958074	+	37952751	37958074	A5SS	0.03	50	50	ENSMUST00000193890.2	ENSMUSG00000102543.6	Pcdhgc5	chr18	protein_coding	protocadherin gamma subfamily C, 5
chr18	37957478	37958074	+	37952751	37958074	A5SS	0.03	50	50	ENSMUST00000193890.2	ENSMUSG00000102543.6	Pcdhgc5	chr18	protein_coding	protocadherin gamma subfamily C, 5
chr18	37957609	37958074	+	37952751	37958074	A5SS	0.03	50	50	ENSMUST00000193890.2	ENSMUSG00000102543.6	Pcdhgc5	chr18	protein_coding	protocadherin gamma subfamily C, 5
chr18	37957717	37958074	+	37952751	37958074	A5SS	0.03	50	50	ENSMUST00000193890.2	ENSMUSG00000102543.6	Pcdhgc5	chr18	protein_coding	protocadherin gamma subfamily C, 5
chr18	37957905	37958074	+	37952751	37958074	A5SS	0.03	50	50	ENSMUST00000193890.2	ENSMUSG00000102543.6	Pcdhgc5	chr18	protein_coding	protocadherin gamma subfamily C, 5
chr18	37957247	37958074	+	37952765	37958074	A5SS	0.03	50	50	ENSMUST00000193941.2	ENSMUSG00000102543.6	Pcdhgc5	chr18	protein_coding	protocadherin gamma subfamily C, 5
chr18	37957478	37958074	+	37952765	37958074	A5SS	0.03	50	50	ENSMUST00000193941.2	ENSMUSG00000102543.6	Pcdhgc5	chr18	protein_coding	protocadherin gamma subfamily C, 5
chr18	37957609	37958074	+	37952765	37958074	A5SS	0.03	50	50	ENSMUST00000193941.2	ENSMUSG00000102543.6	Pcdhgc5	chr18	protein_coding	protocadherin gamma subfamily C, 5
chr18	37957717	37958074	+	37952765	37958074	A5SS	0.03	50	50	ENSMUST00000193941.2	ENSMUSG00000102543.6	Pcdhgc5	chr18	protein_coding	protocadherin gamma subfamily C, 5
chr18	37957905	37958074	+	37952765	37958074	A5SS	0.03	50	50	ENSMUST00000193941.2	ENSMUSG00000102543.6	Pcdhgc5	chr18	protein_coding	protocadherin gamma subfamily C, 5
chr18	37957247	37958074	+	37957478	37958074	A5SS	0.03	50	50	ENSMUST00000192984.6	ENSMUSG00000102828.6	Gm38182	chr18	lncRNA	predicted gene, 38182
chr18	37957609	37958074	+	37957478	37958074	A5SS	0.03	50	50	ENSMUST00000192984.6	ENSMUSG00000102828.6	Gm38182	chr18	lncRNA	predicted gene, 38182
chr18	37957717	37958074	+	37957478	37958074	A5SS	0.03	50	50	ENSMUST00000192984.6	ENSMUSG00000102828.6	Gm38182	chr18	lncRNA	predicted gene, 38182
chr18	37957905	37958074	+	37957478	37958074	A5SS	0.03	50	50	ENSMUST00000192984.6	ENSMUSG00000102828.6	Gm38182	chr18	lncRNA	predicted gene, 38182
chr18	37957609	37958074	+	37957247	37958074	A5SS	0.03	50	50	ENSMUST00000192109.6	ENSMUSG00000102828.6	Gm38182	chr18	lncRNA	predicted gene, 38182
chr18	37957717	37958074	+	37957247	37958074	A5SS	0.03	50	50	ENSMUST00000192109.6	ENSMUSG00000102828.6	Gm38182	chr18	lncRNA	predicted gene, 38182
chr18	37957905	37958074	+	37957247	37958074	A5SS	0.03	50	50	ENSMUST00000192109.6	ENSMUSG00000102828.6	Gm38182	chr18	lncRNA	predicted gene, 38182
chr18	37957609	37958074	+	37957717	37958074	A5SS	0.03	50	50	ENSMUST00000192861.6	ENSMUSG00000102828.6	Gm38182	chr18	lncRNA	predicted gene, 38182
chr18	37957905	37958074	+	37957717	37958074	A5SS	0.03	50	50	ENSMUST00000192861.6	ENSMUSG00000102828.6	Gm38182	chr18	lncRNA	predicted gene, 38182
chr18	37957905	37958074	+	37957609	37958074	A5SS	0.03	50	50	ENSMUST00000194068.6	ENSMUSG00000102828.6	Gm38182	chr18	lncRNA	predicted gene, 38182
chr18	38038212;38039467	38039441;38068255	-	38038212	38068255	cassetteExon	0.5	100	100	ENSMUST00000115634.8	ENSMUSG00000024456.17	Diaph1	chr18	protein_coding	diaphanous related formin 1
chr18	37978544	37984604	-	37978551	37984604	A3SS	0.5	50	50	ENSMUST00000115634.8	ENSMUSG00000024456.17	Diaph1	chr18	protein_coding	diaphanous related formin 1
chr18	37993575	38022751	-	38022276	38022751	A3SS&ES	0.5	50	50	ENSMUST00000115634.8	ENSMUSG00000024456.17	Diaph1	chr18	protein_coding	diaphanous related formin 1
chr18	38044324	38068255	-	38038212	38068255	A3SS	0.33	50	50	ENSMUST00000115634.8	ENSMUSG00000024456.17	Diaph1	chr18	protein_coding	diaphanous related formin 1
chr18	38039467;38044324	38044222;38068255	-	38039467	38068255	cassetteExon	0.5	100	100	ENSMUST00000025337.14	ENSMUSG00000024456.17	Diaph1	chr18	protein_coding	diaphanous related formin 1
chr18	38038212	38068255	-	38038212	38039441	5pMXE	0.5	50	50	ENSMUST00000115629.9	ENSMUSG00000024456.17	Diaph1	chr18	protein_coding	diaphanous related formin 1
chr18	38078828	38087735	-	38078828;38085666	38085524;38087735	ES	0.5	50	50	ENSMUST00000043498.9	ENSMUSG00000024454.17	Hdac3	chr18	protein_coding	histone deacetylase 3
chr18	38078828	38087735	-	38085666	38087735	A3SS&ES	0.5	50	50	ENSMUST00000236756.2	ENSMUSG00000024454.17	Hdac3	chr18	protein_coding	histone deacetylase 3
chr18	38091442	38091812	+	38091442	38091565	3pMXE	0.5	50	50	ENSMUST00000163128.9	ENSMUSG00000044024.17	Rell2	chr18	protein_coding	RELT-like 2
chr18	38090047;38090827	38090512;38091067	+	38090047	38091067	cassetteExon	0.5	100	100	ENSMUST00000163128.9	ENSMUSG00000044024.17	Rell2	chr18	protein_coding	RELT-like 2
chr18	38090047;38090827	38090642;38091067	+	38090047	38091067	cassetteExon	0.5	100	100	ENSMUST00000163128.9	ENSMUSG00000044024.17	Rell2	chr18	protein_coding	RELT-like 2
chr18	38090047	38090142	+	38090047	38091067	A3SS	0.25	50	50	ENSMUST00000163128.9	ENSMUSG00000044024.17	Rell2	chr18	protein_coding	RELT-like 2
chr18	38088962	38089982	+	38089620	38089982	A5SS	0.33	50	50	ENSMUST00000163128.9	ENSMUSG00000044024.17	Rell2	chr18	protein_coding	RELT-like 2
chr18	38088969	38089982	+	38089620	38089982	A5SS	0.33	50	50	ENSMUST00000163128.9	ENSMUSG00000044024.17	Rell2	chr18	protein_coding	RELT-like 2
chr18	38090047;38090208	38090142;38090642	+	38090047	38090642	cassetteExon	0.5	100	100	ENSMUST00000168056.9	ENSMUSG00000044024.17	Rell2	chr18	protein_coding	RELT-like 2
chr18	38090047	38090512	+	38090047	38090642	A3SS	0.25	50	50	ENSMUST00000168056.9	ENSMUSG00000044024.17	Rell2	chr18	protein_coding	RELT-like 2
chr18	38088969;38089620	38089381;38089982	+	38088969	38089982	cassetteExon	0.5	100	100	ENSMUST00000176902.8	ENSMUSG00000044024.17	Rell2	chr18	protein_coding	RELT-like 2
chr18	38091442;38091624	38091565;38091812	+	38091442	38091812	cassetteExon	0.5	100	100	ENSMUST00000176902.8	ENSMUSG00000044024.17	Rell2	chr18	protein_coding	RELT-like 2
chr18	38090047	38090512	+	38090047	38090142	A3SS&ES	0.25	50	50	ENSMUST00000176902.8	ENSMUSG00000044024.17	Rell2	chr18	protein_coding	RELT-like 2
chr18	38088962	38089982	+	38088969	38089982	A5SS	0.33	50	50	ENSMUST00000176902.8	ENSMUSG00000044024.17	Rell2	chr18	protein_coding	RELT-like 2
chr18	38088962	38089982	+	38088962;38089620	38089381;38089982	ES	0.33	50	50	ENSMUST00000070709.9	ENSMUSG00000044024.17	Rell2	chr18	protein_coding	RELT-like 2
chr18	38088969	38089381	+	38088962	38089381	A5SS	0.33	50	50	ENSMUST00000070709.9	ENSMUSG00000044024.17	Rell2	chr18	protein_coding	RELT-like 2
chr18	38088978	38089381	+	38088962	38089381	A5SS	0.33	50	50	ENSMUST00000070709.9	ENSMUSG00000044024.17	Rell2	chr18	protein_coding	RELT-like 2
chr18	38088978	38089381	+	38088969	38089381	A5SS	0.33	50	50	ENSMUST00000177058.8	ENSMUSG00000044024.17	Rell2	chr18	protein_coding	RELT-like 2
chr18	38090047	38091067	+	38090047	38090642	3pMXE	0.25	50	50	ENSMUST00000235611.2	ENSMUSG00000044024.17	Rell2	chr18	protein_coding	RELT-like 2
chr18	38100954	38101267	-	38100948	38101267	A3SS	0.5	50	50	ENSMUST00000043437.14	ENSMUSG00000038524.14	Fchsd1	chr18	protein_coding	FCH and double SH3 domains 1
chr18	38101386	38101803	-	38101334	38101803	A3SS	0.5	50	50	ENSMUST00000043437.14	ENSMUSG00000038524.14	Fchsd1	chr18	protein_coding	FCH and double SH3 domains 1
chr18	38106704	38107418	-	38106704;38107193	38107155;38107418	ES	0.5	50	50	ENSMUST00000237272.2	ENSMUSG00000024451.10	Arap3	chr18	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
chr18	38116222	38117287	-	38115226	38117287	A3SS	0.5	50	50	ENSMUST00000237272.2	ENSMUSG00000024451.10	Arap3	chr18	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
chr18	38123097	38123565	-	38123128	38123565	A3SS	0.5	50	50	ENSMUST00000237272.2	ENSMUSG00000024451.10	Arap3	chr18	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
chr18	38129727	38131749	-	38130144	38131749	A3SS	0.33	50	50	ENSMUST00000237272.2	ENSMUSG00000024451.10	Arap3	chr18	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
chr18	38130176	38131749	-	38130144	38131749	A3SS	0.33	50	50	ENSMUST00000237272.2	ENSMUSG00000024451.10	Arap3	chr18	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
chr18	38130176	38131749	-	38130176	38130586	5pMXE	0.5	50	50	ENSMUST00000042944.9	ENSMUSG00000024451.10	Arap3	chr18	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
chr18	38129727	38131749	-	38130176	38131749	A3SS	0.33	50	50	ENSMUST00000236588.2	ENSMUSG00000024451.10	Arap3	chr18	protein_coding	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
chr18	38322995	38325105	-	38322995;38324152	38324114;38325105	ES	0.5	50	50	ENSMUST00000160721.8	ENSMUSG00000051375.16	Pcdh1	chr18	protein_coding	protocadherin 1
chr18	38332581	38335797	-	38325324	38335797	A3SS	0.5	50	50	ENSMUST00000160721.8	ENSMUSG00000051375.16	Pcdh1	chr18	protein_coding	protocadherin 1
chr18	38325324	38330386	-	38325324	38335797	A5SS	0.5	50	50	ENSMUST00000160721.8	ENSMUSG00000051375.16	Pcdh1	chr18	protein_coding	protocadherin 1
chr18	38336659	38336823	-	38336659	38344842	A5SS	0.25	50	50	ENSMUST00000160721.8	ENSMUSG00000051375.16	Pcdh1	chr18	protein_coding	protocadherin 1
chr18	38336659	38342612	-	38336659	38344842	A5SS	0.25	50	50	ENSMUST00000160721.8	ENSMUSG00000051375.16	Pcdh1	chr18	protein_coding	protocadherin 1
chr18	38336659	38343337	-	38336659	38344842	A5SS	0.25	50	50	ENSMUST00000160721.8	ENSMUSG00000051375.16	Pcdh1	chr18	protein_coding	protocadherin 1
chr18	38325324	38335797	-	38325324;38332581	38330386;38335797	ES	0.5	50	50	ENSMUST00000161701.3	ENSMUSG00000051375.16	Pcdh1	chr18	protein_coding	protocadherin 1
chr18	38336659	38343337	-	38336659	38342612	5pMXE	0.25	50	50	ENSMUST00000057185.13	ENSMUSG00000051375.16	Pcdh1	chr18	protein_coding	protocadherin 1
chr18	38336659	38336823	-	38336659	38342612	A5SS	0.25	50	50	ENSMUST00000057185.13	ENSMUSG00000051375.16	Pcdh1	chr18	protein_coding	protocadherin 1
chr18	38336659	38343337	-	38336659	38336823	5pMXE	0.25	50	50	ENSMUST00000194312.2	ENSMUSG00000051375.16	Pcdh1	chr18	protein_coding	protocadherin 1
chr18	38346834	38361773	+	38342923	38361773	A5SS	0.5	50	50	ENSMUST00000160935.2	ENSMUSG00000089983.3	2010320O07Rik	chr18	lncRNA	RIKEN cDNA 2010320O07 gene
chr18	38374006	38383231	-	38372242	38383231	A3SS	0.5	50	50	ENSMUST00000181757.8	ENSMUSG00000097080.9	1700086O06Rik	chr18	lncRNA	RIKEN cDNA 1700086O06 gene
chr18	38372242	38372626	-	38372242	38383231	A5SS	0.33	50	50	ENSMUST00000181757.8	ENSMUSG00000097080.9	1700086O06Rik	chr18	lncRNA	RIKEN cDNA 1700086O06 gene
chr18	38372242	38382767	-	38372242	38383231	A5SS	0.33	50	50	ENSMUST00000181757.8	ENSMUSG00000097080.9	1700086O06Rik	chr18	lncRNA	RIKEN cDNA 1700086O06 gene
chr18	38372242;38372804	38372626;38382767	-	38372242	38382767	cassetteExon	0.5	100	100	ENSMUST00000181871.3	ENSMUSG00000097080.9	1700086O06Rik	chr18	lncRNA	RIKEN cDNA 1700086O06 gene
chr18	38374006	38382767	-	38372242	38382767	A3SS	0.33	50	50	ENSMUST00000181871.3	ENSMUSG00000097080.9	1700086O06Rik	chr18	lncRNA	RIKEN cDNA 1700086O06 gene
chr18	38372804	38382767	-	38372804;38374006	38373892;38382767	ES	0.33	50	50	ENSMUST00000235608.2	ENSMUSG00000097080.9	1700086O06Rik	chr18	lncRNA	RIKEN cDNA 1700086O06 gene
chr18	38374006	38383231	-	38374006	38382767	5pMXE	0.5	50	50	ENSMUST00000235608.2	ENSMUSG00000097080.9	1700086O06Rik	chr18	lncRNA	RIKEN cDNA 1700086O06 gene
chr18	38372804;38373806	38373711;38373892	-	38372804	38373892	cassetteExon	0.5	100	100	ENSMUST00000235608.2	ENSMUSG00000097080.9	1700086O06Rik	chr18	lncRNA	RIKEN cDNA 1700086O06 gene
chr18	38372804;38374006	38373711;38382767	-	38372804	38382767	cassetteExon	0.5	100	100	ENSMUST00000235525.2	ENSMUSG00000097080.9	1700086O06Rik	chr18	lncRNA	RIKEN cDNA 1700086O06 gene
chr18	38372242	38382767	-	38372242	38372626	A5SS&ES	0.33	50	50	ENSMUST00000235818.2	ENSMUSG00000097080.9	1700086O06Rik	chr18	lncRNA	RIKEN cDNA 1700086O06 gene
chr18	38372804	38382767	-	38372804	38373892	A5SS&ES	0.33	50	50	ENSMUST00000235818.2	ENSMUSG00000097080.9	1700086O06Rik	chr18	lncRNA	RIKEN cDNA 1700086O06 gene
chr18	38410981	38417130	-	38410981	38414244	A5SS	0.5	50	50	ENSMUST00000025311.8	ENSMUSG00000024440.14	Pcdh12	chr18	protein_coding	protocadherin 12
chr18	38430628	38432807	+	38430628;38431448	38431362;38432807	ES	0.25	50	50	ENSMUST00000235812.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38429851	38430553	+	38425745	38430553	A5SS	0.33	50	50	ENSMUST00000235812.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38429851	38431362	+	38430628	38431362	A5SS&ES	0.33	50	50	ENSMUST00000235812.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38429851	38432807	+	38431448	38432807	A5SS&ES	0.25	50	50	ENSMUST00000235812.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38430258	38430553	+	38425745	38430553	A5SS	0.33	50	50	ENSMUST00000235812.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38430258	38431362	+	38430628	38431362	A5SS&ES	0.33	50	50	ENSMUST00000235812.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38430484	38432807	+	38431448	38432807	A5SS&ES	0.25	50	50	ENSMUST00000235812.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38429851	38433482	+	38429851;38432979	38432807;38433482	ES	0.5	50	50	ENSMUST00000170811.8	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38429851;38430484	38430306;38432807	+	38429851	38432807	cassetteExon	0.5	100	100	ENSMUST00000170811.8	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38429851;38430628	38430306;38432807	+	38429851	38432807	cassetteExon	0.5	100	100	ENSMUST00000170811.8	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38429851;38430628	38430519;38432807	+	38429851	38432807	cassetteExon	0.5	100	100	ENSMUST00000170811.8	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38429851;38430628	38430553;38432807	+	38429851	38432807	cassetteExon	0.5	100	100	ENSMUST00000170811.8	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38429851;38431448	38431362;38432807	+	38429851	38432807	cassetteExon	0.5	100	100	ENSMUST00000170811.8	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38433643;38434860	38434709;38440918	+	38433643	38440918	cassetteExon	0.5	100	100	ENSMUST00000170811.8	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38433537	38440918	+	38433643	38440918	A5SS	0.25	50	50	ENSMUST00000170811.8	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38433537	38449578	+	38447856	38449578	A5SS&ES	0.5	50	50	ENSMUST00000170811.8	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38440485	38440918	+	38433643	38440918	A5SS	0.25	50	50	ENSMUST00000170811.8	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38434860;38440485	38440421;38440918	+	38434860	38440918	cassetteExon	0.5	100	100	ENSMUST00000072376.13	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38434860	38437145	+	38434860	38440918	A3SS	0.33	50	50	ENSMUST00000072376.13	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38433537	38434709	+	38433643	38434709	A5SS	0.5	50	50	ENSMUST00000072376.13	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38433537	38440918	+	38434860	38440918	A5SS&ES	0.25	50	50	ENSMUST00000072376.13	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38429851	38433482	+	38429851	38432807	3pMXE	0.16	50	50	ENSMUST00000238031.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38429851	38431362	+	38429851;38430628	38430553;38431362	ES	0.33	50	50	ENSMUST00000237903.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38433643	38440918	+	38433643	38434709	3pMXE	0.5	50	50	ENSMUST00000237903.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38429851;38430484	38430306;38432807	+	38429851;38431448	38430553;38432807	MXE	0.5	100	100	ENSMUST00000237903.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38429851	38430519	+	38429851	38430553	A3SS	0.16	50	50	ENSMUST00000237903.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38430258	38430553	+	38429851	38430553	A5SS	0.33	50	50	ENSMUST00000237903.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38429851;38430484	38430306;38432807	+	38429851;38430628	38430553;38432807	MXE	0.5	100	100	ENSMUST00000236116.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38429851;38431448	38431362;38432807	+	38429851;38430628	38430553;38432807	MXE	0.5	100	100	ENSMUST00000236116.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38434860	38440421	+	38434860	38437145	3pMXE	0.33	50	50	ENSMUST00000236353.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38429851;38430484	38430306;38432807	+	38429851;38431448	38431362;38432807	MXE	0.5	100	100	ENSMUST00000237824.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38429851;38430628	38430306;38431362	+	38429851	38431362	cassetteExon	0.5	100	100	ENSMUST00000237824.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38429851;38430628	38430306;38432807	+	38429851;38431448	38431362;38432807	MXE	0.5	100	100	ENSMUST00000237824.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38429851;38430628	38430519;38431362	+	38429851	38431362	cassetteExon	0.5	100	100	ENSMUST00000237824.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38429851;38430628	38430519;38432807	+	38429851;38431448	38431362;38432807	MXE	0.5	100	100	ENSMUST00000237824.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38430258	38431362	+	38429851	38431362	A5SS	0.33	50	50	ENSMUST00000237824.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38429851;38430484	38430306;38432807	+	38429851;38431448	38430519;38432807	MXE	0.5	100	100	ENSMUST00000236982.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38430268	38430519	+	38429851	38430519	A5SS	0.5	50	50	ENSMUST00000236982.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38433537	38449578	+	38433537	38440918	3pMXE	0.33	50	50	ENSMUST00000235549.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38433537;38434860	38434709;38440918	+	38433537	38440918	cassetteExon	0.5	100	100	ENSMUST00000235549.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38440485	38440918	+	38433537	38440918	A5SS	0.25	50	50	ENSMUST00000235549.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38429851;38430628	38430519;38432807	+	38429851;38430484	38430306;38432807	MXE	0.5	100	100	ENSMUST00000236690.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38433537	38434709	+	38433537	38449578	A3SS	0.33	50	50	ENSMUST00000237416.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38429851	38430306	+	38429851	38433482	A3SS	0.16	50	50	ENSMUST00000237089.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38429851	38430519	+	38429851	38433482	A3SS	0.16	50	50	ENSMUST00000237089.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38429851	38430553	+	38429851	38433482	A3SS	0.16	50	50	ENSMUST00000237089.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38429851	38431362	+	38429851	38433482	A3SS	0.16	50	50	ENSMUST00000237089.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38430258;38431448	38431362;38432807	+	38430258;38430628	38430553;38432807	MXE	0.5	100	100	ENSMUST00000171461.3	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38430484	38432807	+	38430628	38432807	A5SS&ES	0.33	50	50	ENSMUST00000171461.3	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38430258;38430628	38430553;38431362	+	38430258	38431362	cassetteExon	0.5	100	100	ENSMUST00000235811.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38429851	38432807	+	38430484	38432807	5pMXE	0.25	50	50	ENSMUST00000235491.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38429851	38433482	+	38432979	38433482	5pMXE	0.5	50	50	ENSMUST00000237667.2	ENSMUSG00000060450.15	Rnf14	chr18	protein_coding	ring finger protein 14
chr18	38462026;38463713	38463539;38466207	-	38462026	38466207	cassetteExon	0.5	100	100	ENSMUST00000237487.2	ENSMUSG00000052102.16	Gnpda1	chr18	protein_coding	glucosamine-6-phosphate deaminase 1
chr18	38465205	38466207	-	38462026	38466207	A3SS	0.33	50	50	ENSMUST00000237487.2	ENSMUSG00000052102.16	Gnpda1	chr18	protein_coding	glucosamine-6-phosphate deaminase 1
chr18	38471275	38471915	-	38471275	38471961	A5SS	0.5	50	50	ENSMUST00000237487.2	ENSMUSG00000052102.16	Gnpda1	chr18	protein_coding	glucosamine-6-phosphate deaminase 1
chr18	38463713;38465205	38465021;38466207	-	38463713	38466207	cassetteExon	0.5	100	100	ENSMUST00000235590.2	ENSMUSG00000052102.16	Gnpda1	chr18	protein_coding	glucosamine-6-phosphate deaminase 1
chr18	38463694	38465021	-	38463713	38465021	A3SS	0.5	50	50	ENSMUST00000063814.15	ENSMUSG00000052102.16	Gnpda1	chr18	protein_coding	glucosamine-6-phosphate deaminase 1
chr18	38593703	38597290	+	38593703	38597330	A3SS	0.33	50	50	ENSMUST00000236052.2	ENSMUSG00000024425.5	Ndfip1	chr18	protein_coding	Nedd4 family interacting protein 1
chr18	38593703	38597314	+	38593703	38597330	A3SS	0.33	50	50	ENSMUST00000236052.2	ENSMUSG00000024425.5	Ndfip1	chr18	protein_coding	Nedd4 family interacting protein 1
chr18	38552229	38575970	+	38543539	38575970	A5SS	0.5	50	50	ENSMUST00000236052.2	ENSMUSG00000024425.5	Ndfip1	chr18	protein_coding	Nedd4 family interacting protein 1
chr18	38585424	38589108	+	38585482	38589108	A5SS	0.5	50	50	ENSMUST00000236052.2	ENSMUSG00000024425.5	Ndfip1	chr18	protein_coding	Nedd4 family interacting protein 1
chr18	38593703	38597290	+	38593703	38597314	A3SS	0.33	50	50	ENSMUST00000025293.5	ENSMUSG00000024425.5	Ndfip1	chr18	protein_coding	Nedd4 family interacting protein 1
chr18	38750827	38809771	+	38750827	38775438	3pMXE	0.5	50	50	ENSMUST00000145090.8	ENSMUSG00000118257.2	9630014M24Rik	chr18	lncRNA	RIKEN cDNA 9630014M24 gene
chr18	38762115	38775438	+	38750827	38775438	A5SS	0.5	50	50	ENSMUST00000145090.8	ENSMUSG00000118257.2	9630014M24Rik	chr18	lncRNA	RIKEN cDNA 9630014M24 gene
chr18	38809858	39066846	+	38809858	38921679	3pMXE	0.33	50	50	ENSMUST00000127448.8	ENSMUSG00000118257.2	9630014M24Rik	chr18	lncRNA	RIKEN cDNA 9630014M24 gene
chr18	38809858	38841039	+	38809858	38921679	A3SS	0.33	50	50	ENSMUST00000127448.8	ENSMUSG00000118257.2	9630014M24Rik	chr18	lncRNA	RIKEN cDNA 9630014M24 gene
chr18	38809858	38841039	+	38809858	39066846	A3SS	0.33	50	50	ENSMUST00000148850.8	ENSMUSG00000118193.2	Arhgap26	chr18	protein_coding	Rho GTPase activating protein 26
chr18	39067017	39102600	+	39067017	39230683	A3SS	0.5	50	50	ENSMUST00000148850.8	ENSMUSG00000118193.2	Arhgap26	chr18	protein_coding	Rho GTPase activating protein 26
chr18	39032952	39066846	+	38809858	39066846	A5SS	0.5	50	50	ENSMUST00000148850.8	ENSMUSG00000118193.2	Arhgap26	chr18	protein_coding	Rho GTPase activating protein 26
chr18	39126682	39230683	+	39067017	39230683	A5SS	0.5	50	50	ENSMUST00000148850.8	ENSMUSG00000118193.2	Arhgap26	chr18	protein_coding	Rho GTPase activating protein 26
chr18	39232455	39232625	+	39230778	39232625	A5SS	0.5	50	50	ENSMUST00000148850.8	ENSMUSG00000118193.2	Arhgap26	chr18	protein_coding	Rho GTPase activating protein 26
chr18	38975174	38991599	-	38975174;38980203	38980100;38991599	ES	0.33	50	50	ENSMUST00000040647.11	ENSMUSG00000036585.17	Fgf1	chr18	protein_coding	fibroblast growth factor 1
chr18	38991801	39062159	-	38991801	39051600	5pMXE	0.16	50	50	ENSMUST00000040647.11	ENSMUSG00000036585.17	Fgf1	chr18	protein_coding	fibroblast growth factor 1
chr18	38991801	39062319	-	38991801	39051600	5pMXE	0.16	50	50	ENSMUST00000040647.11	ENSMUSG00000036585.17	Fgf1	chr18	protein_coding	fibroblast growth factor 1
chr18	38980203;38988096	38988007;38991599	-	38980203	38991599	cassetteExon	0.5	100	100	ENSMUST00000040647.11	ENSMUSG00000036585.17	Fgf1	chr18	protein_coding	fibroblast growth factor 1
chr18	38991801	38999110	-	38991801	39051600	A5SS	0.16	50	50	ENSMUST00000040647.11	ENSMUSG00000036585.17	Fgf1	chr18	protein_coding	fibroblast growth factor 1
chr18	38991801	38999604	-	38991801	39051600	A5SS	0.16	50	50	ENSMUST00000040647.11	ENSMUSG00000036585.17	Fgf1	chr18	protein_coding	fibroblast growth factor 1
chr18	38991801	38999888	-	38991801	39051600	A5SS	0.16	50	50	ENSMUST00000040647.11	ENSMUSG00000036585.17	Fgf1	chr18	protein_coding	fibroblast growth factor 1
chr18	38991801	38999110	-	38991801	39062319	A5SS	0.16	50	50	ENSMUST00000131348.8	ENSMUSG00000036585.17	Fgf1	chr18	protein_coding	fibroblast growth factor 1
chr18	38991801	38999604	-	38991801	39062319	A5SS	0.16	50	50	ENSMUST00000131348.8	ENSMUSG00000036585.17	Fgf1	chr18	protein_coding	fibroblast growth factor 1
chr18	38991801	38999888	-	38991801	39062319	A5SS	0.16	50	50	ENSMUST00000131348.8	ENSMUSG00000036585.17	Fgf1	chr18	protein_coding	fibroblast growth factor 1
chr18	38991801	39062159	-	38991801	39062319	A5SS	0.16	50	50	ENSMUST00000131348.8	ENSMUSG00000036585.17	Fgf1	chr18	protein_coding	fibroblast growth factor 1
chr18	38991801	38999888	-	38991801	38999604	5pMXE	0.16	50	50	ENSMUST00000115582.8	ENSMUSG00000036585.17	Fgf1	chr18	protein_coding	fibroblast growth factor 1
chr18	38991801	39062159	-	38991801	38999604	5pMXE	0.16	50	50	ENSMUST00000115582.8	ENSMUSG00000036585.17	Fgf1	chr18	protein_coding	fibroblast growth factor 1
chr18	38991801	38999110	-	38991801	38999604	A5SS	0.16	50	50	ENSMUST00000115582.8	ENSMUSG00000036585.17	Fgf1	chr18	protein_coding	fibroblast growth factor 1
chr18	38991801	39062159	-	38991801	38999888	5pMXE	0.16	50	50	ENSMUST00000236630.2	ENSMUSG00000036585.17	Fgf1	chr18	protein_coding	fibroblast growth factor 1
chr18	38991801	38999110	-	38991801	38999888	A5SS	0.16	50	50	ENSMUST00000236630.2	ENSMUSG00000036585.17	Fgf1	chr18	protein_coding	fibroblast growth factor 1
chr18	38988096	38991599	-	38975174	38991599	A3SS	0.33	50	50	ENSMUST00000117566.8	ENSMUSG00000036585.17	Fgf1	chr18	protein_coding	fibroblast growth factor 1
chr18	38975174	38991599	-	38980203	38991599	3pMXE	0.33	50	50	ENSMUST00000236060.2	ENSMUSG00000036585.17	Fgf1	chr18	protein_coding	fibroblast growth factor 1
chr18	38991801;39051750	39051600;39062159	-	38991801	39062159	cassetteExon	0.5	100	100	ENSMUST00000235922.2	ENSMUSG00000036585.17	Fgf1	chr18	protein_coding	fibroblast growth factor 1
chr18	38991801	38999110	-	38991801	39062159	A5SS	0.16	50	50	ENSMUST00000235922.2	ENSMUSG00000036585.17	Fgf1	chr18	protein_coding	fibroblast growth factor 1
chr18	39439905	39496170	+	39439905;39490881	39490606;39496170	ES	0.25	50	50	ENSMUST00000097593.9	ENSMUSG00000036452.19	Arhgap26	chr18	protein_coding	Rho GTPase activating protein 26
chr18	39439905	39440071	+	39439905	39490606	A3SS	0.25	50	50	ENSMUST00000097593.9	ENSMUSG00000036452.19	Arhgap26	chr18	protein_coding	Rho GTPase activating protein 26
chr18	39439905	39490791	+	39439905	39490606	A3SS	0.25	50	50	ENSMUST00000097593.9	ENSMUSG00000036452.19	Arhgap26	chr18	protein_coding	Rho GTPase activating protein 26
chr18	39490881	39493808	+	39490881	39496170	A3SS	0.5	50	50	ENSMUST00000097593.9	ENSMUSG00000036452.19	Arhgap26	chr18	protein_coding	Rho GTPase activating protein 26
chr18	39496261	39499918	+	39496261	39504127	A3SS	0.5	50	50	ENSMUST00000097593.9	ENSMUSG00000036452.19	Arhgap26	chr18	protein_coding	Rho GTPase activating protein 26
chr18	39424708	39429838	+	39419739	39429838	A5SS	0.5	50	50	ENSMUST00000097593.9	ENSMUSG00000036452.19	Arhgap26	chr18	protein_coding	Rho GTPase activating protein 26
chr18	39490716	39496170	+	39490881	39496170	A5SS	0.25	50	50	ENSMUST00000097593.9	ENSMUSG00000036452.19	Arhgap26	chr18	protein_coding	Rho GTPase activating protein 26
chr18	39495907	39496170	+	39490881	39496170	A5SS	0.25	50	50	ENSMUST00000097593.9	ENSMUSG00000036452.19	Arhgap26	chr18	protein_coding	Rho GTPase activating protein 26
chr18	39439905;39490716	39490606;39496170	+	39439905	39496170	cassetteExon	0.5	100	100	ENSMUST00000137497.9	ENSMUSG00000036452.19	Arhgap26	chr18	protein_coding	Rho GTPase activating protein 26
chr18	39439905;39490881	39490791;39496170	+	39439905	39496170	cassetteExon	0.5	100	100	ENSMUST00000137497.9	ENSMUSG00000036452.19	Arhgap26	chr18	protein_coding	Rho GTPase activating protein 26
chr18	39439905	39440071	+	39439905	39496170	A3SS	0.25	50	50	ENSMUST00000137497.9	ENSMUSG00000036452.19	Arhgap26	chr18	protein_coding	Rho GTPase activating protein 26
chr18	39495907	39496170	+	39439905	39496170	A5SS	0.25	50	50	ENSMUST00000137497.9	ENSMUSG00000036452.19	Arhgap26	chr18	protein_coding	Rho GTPase activating protein 26
chr18	39439905;39490881	39490791;39496170	+	39439905;39490716	39490606;39496170	MXE	0.5	100	100	ENSMUST00000155576.8	ENSMUSG00000036452.19	Arhgap26	chr18	protein_coding	Rho GTPase activating protein 26
chr18	39490716;39490881	39490852;39496170	+	39490716	39496170	cassetteExon	0.5	100	100	ENSMUST00000155576.8	ENSMUSG00000036452.19	Arhgap26	chr18	protein_coding	Rho GTPase activating protein 26
chr18	39495907	39496170	+	39490716	39496170	A5SS	0.25	50	50	ENSMUST00000155576.8	ENSMUSG00000036452.19	Arhgap26	chr18	protein_coding	Rho GTPase activating protein 26
chr18	39439905	39490791	+	39439905	39440071	3pMXE	0.25	50	50	ENSMUST00000148399.2	ENSMUSG00000036452.19	Arhgap26	chr18	protein_coding	Rho GTPase activating protein 26
chr18	39424708	39429838	+	39424708	39440071	A3SS	0.5	50	50	ENSMUST00000235817.2	ENSMUSG00000036452.19	Arhgap26	chr18	protein_coding	Rho GTPase activating protein 26
chr18	39439905	39440071	+	39424708	39440071	A5SS	0.5	50	50	ENSMUST00000235817.2	ENSMUSG00000036452.19	Arhgap26	chr18	protein_coding	Rho GTPase activating protein 26
chr18	39620298	39624125	-	39620298	39623621	5pMXE	0.14	50	50	ENSMUST00000115567.8	ENSMUSG00000024431.16	Nr3c1	chr18	protein_coding	nuclear receptor subfamily 3, group C, member 1
chr18	39620298	39624139	-	39620298	39623621	5pMXE	0.14	50	50	ENSMUST00000115567.8	ENSMUSG00000024431.16	Nr3c1	chr18	protein_coding	nuclear receptor subfamily 3, group C, member 1
chr18	39620298	39652216	-	39620298	39623621	5pMXE	0.14	50	50	ENSMUST00000115567.8	ENSMUSG00000024431.16	Nr3c1	chr18	protein_coding	nuclear receptor subfamily 3, group C, member 1
chr18	39557552	39561667	-	39557552	39561670	A5SS	0.5	50	50	ENSMUST00000115567.8	ENSMUSG00000024431.16	Nr3c1	chr18	protein_coding	nuclear receptor subfamily 3, group C, member 1
chr18	39620298	39621993	-	39620298	39623621	A5SS	0.14	50	50	ENSMUST00000115567.8	ENSMUSG00000024431.16	Nr3c1	chr18	protein_coding	nuclear receptor subfamily 3, group C, member 1
chr18	39620298	39622530	-	39620298	39623621	A5SS	0.14	50	50	ENSMUST00000115567.8	ENSMUSG00000024431.16	Nr3c1	chr18	protein_coding	nuclear receptor subfamily 3, group C, member 1
chr18	39620298	39622798	-	39620298	39623621	A5SS	0.14	50	50	ENSMUST00000115567.8	ENSMUSG00000024431.16	Nr3c1	chr18	protein_coding	nuclear receptor subfamily 3, group C, member 1
chr18	39620298	39624125	-	39620298	39622798	5pMXE	0.14	50	50	ENSMUST00000025300.13	ENSMUSG00000024431.16	Nr3c1	chr18	protein_coding	nuclear receptor subfamily 3, group C, member 1
chr18	39620298	39624139	-	39620298	39622798	5pMXE	0.14	50	50	ENSMUST00000025300.13	ENSMUSG00000024431.16	Nr3c1	chr18	protein_coding	nuclear receptor subfamily 3, group C, member 1
chr18	39620298	39652216	-	39620298	39622798	5pMXE	0.14	50	50	ENSMUST00000025300.13	ENSMUSG00000024431.16	Nr3c1	chr18	protein_coding	nuclear receptor subfamily 3, group C, member 1
chr18	39620298	39621993	-	39620298	39622798	A5SS	0.14	50	50	ENSMUST00000025300.13	ENSMUSG00000024431.16	Nr3c1	chr18	protein_coding	nuclear receptor subfamily 3, group C, member 1
chr18	39620298	39622530	-	39620298	39622798	A5SS	0.14	50	50	ENSMUST00000025300.13	ENSMUSG00000024431.16	Nr3c1	chr18	protein_coding	nuclear receptor subfamily 3, group C, member 1
chr18	39620298	39624125	-	39620298	39622530	5pMXE	0.14	50	50	ENSMUST00000152853.2	ENSMUSG00000024431.16	Nr3c1	chr18	protein_coding	nuclear receptor subfamily 3, group C, member 1
chr18	39620298	39624139	-	39620298	39622530	5pMXE	0.14	50	50	ENSMUST00000152853.2	ENSMUSG00000024431.16	Nr3c1	chr18	protein_coding	nuclear receptor subfamily 3, group C, member 1
chr18	39620298	39652216	-	39620298	39622530	5pMXE	0.14	50	50	ENSMUST00000152853.2	ENSMUSG00000024431.16	Nr3c1	chr18	protein_coding	nuclear receptor subfamily 3, group C, member 1
chr18	39620298	39621993	-	39620298	39622530	A5SS	0.14	50	50	ENSMUST00000152853.2	ENSMUSG00000024431.16	Nr3c1	chr18	protein_coding	nuclear receptor subfamily 3, group C, member 1
chr18	39620298	39652216	-	39620298	39624125	5pMXE	0.14	50	50	ENSMUST00000124115.2	ENSMUSG00000024431.16	Nr3c1	chr18	protein_coding	nuclear receptor subfamily 3, group C, member 1
chr18	39620298	39621993	-	39620298	39624125	A5SS	0.14	50	50	ENSMUST00000124115.2	ENSMUSG00000024431.16	Nr3c1	chr18	protein_coding	nuclear receptor subfamily 3, group C, member 1
chr18	39620298	39624139	-	39620298	39624125	A5SS	0.14	50	50	ENSMUST00000124115.2	ENSMUSG00000024431.16	Nr3c1	chr18	protein_coding	nuclear receptor subfamily 3, group C, member 1
chr18	39620298	39624139	-	39620298	39621993	5pMXE	0.14	50	50	ENSMUST00000131885.2	ENSMUSG00000024431.16	Nr3c1	chr18	protein_coding	nuclear receptor subfamily 3, group C, member 1
chr18	39620298	39652216	-	39620298	39621993	5pMXE	0.14	50	50	ENSMUST00000131885.2	ENSMUSG00000024431.16	Nr3c1	chr18	protein_coding	nuclear receptor subfamily 3, group C, member 1
chr18	39620298	39624139	-	39620298	39652216	A5SS	0.14	50	50	ENSMUST00000237944.2	ENSMUSG00000024431.16	Nr3c1	chr18	protein_coding	nuclear receptor subfamily 3, group C, member 1
chr18	40345268	40351957	-	40345268	40351799	A5SS&ES	0.5	50	50	ENSMUST00000025364.6	ENSMUSG00000024487.6	Yipf5	chr18	protein_coding	Yip1 domain family, member 5
chr18	40392245;40578986	40578941;40663705	+	40392245	40663705	cassetteExon	0.5	100	100	ENSMUST00000236889.2	ENSMUSG00000051401.8	Kctd16	chr18	protein_coding	potassium channel tetramerisation domain containing 16
chr18	40646211	40663705	+	40392245	40663705	A5SS	0.16	50	50	ENSMUST00000236889.2	ENSMUSG00000051401.8	Kctd16	chr18	protein_coding	potassium channel tetramerisation domain containing 16
chr18	40652033	40663705	+	40392245	40663705	A5SS	0.16	50	50	ENSMUST00000236889.2	ENSMUSG00000051401.8	Kctd16	chr18	protein_coding	potassium channel tetramerisation domain containing 16
chr18	40654912	40663705	+	40392245	40663705	A5SS	0.16	50	50	ENSMUST00000236889.2	ENSMUSG00000051401.8	Kctd16	chr18	protein_coding	potassium channel tetramerisation domain containing 16
chr18	40656267	40663705	+	40392245	40663705	A5SS	0.16	50	50	ENSMUST00000236889.2	ENSMUSG00000051401.8	Kctd16	chr18	protein_coding	potassium channel tetramerisation domain containing 16
chr18	40541225	40578941	+	40392245	40578941	A5SS	0.5	50	50	ENSMUST00000235241.2	ENSMUSG00000051401.8	Kctd16	chr18	protein_coding	potassium channel tetramerisation domain containing 16
chr18	40646211	40663705	+	40578986	40663705	A5SS	0.16	50	50	ENSMUST00000235241.2	ENSMUSG00000051401.8	Kctd16	chr18	protein_coding	potassium channel tetramerisation domain containing 16
chr18	40652033	40663705	+	40578986	40663705	A5SS	0.16	50	50	ENSMUST00000235241.2	ENSMUSG00000051401.8	Kctd16	chr18	protein_coding	potassium channel tetramerisation domain containing 16
chr18	40654912	40663705	+	40578986	40663705	A5SS	0.16	50	50	ENSMUST00000235241.2	ENSMUSG00000051401.8	Kctd16	chr18	protein_coding	potassium channel tetramerisation domain containing 16
chr18	40656267	40663705	+	40578986	40663705	A5SS	0.16	50	50	ENSMUST00000235241.2	ENSMUSG00000051401.8	Kctd16	chr18	protein_coding	potassium channel tetramerisation domain containing 16
chr18	40646211;40652033	40651976;40663705	+	40646211	40663705	cassetteExon	0.5	100	100	ENSMUST00000238039.2	ENSMUSG00000051401.8	Kctd16	chr18	protein_coding	potassium channel tetramerisation domain containing 16
chr18	40654912	40663705	+	40646211	40663705	A5SS	0.16	50	50	ENSMUST00000238039.2	ENSMUSG00000051401.8	Kctd16	chr18	protein_coding	potassium channel tetramerisation domain containing 16
chr18	40656267	40663705	+	40646211	40663705	A5SS	0.16	50	50	ENSMUST00000238039.2	ENSMUSG00000051401.8	Kctd16	chr18	protein_coding	potassium channel tetramerisation domain containing 16
chr18	40648172	40651976	+	40646211	40651976	A5SS	0.5	50	50	ENSMUST00000237456.2	ENSMUSG00000051401.8	Kctd16	chr18	protein_coding	potassium channel tetramerisation domain containing 16
chr18	40654912	40663705	+	40652033	40663705	A5SS	0.25	50	50	ENSMUST00000237456.2	ENSMUSG00000051401.8	Kctd16	chr18	protein_coding	potassium channel tetramerisation domain containing 16
chr18	40656267	40663705	+	40652033	40663705	A5SS	0.25	50	50	ENSMUST00000237456.2	ENSMUSG00000051401.8	Kctd16	chr18	protein_coding	potassium channel tetramerisation domain containing 16
chr18	40656267	40663705	+	40654912	40663705	A5SS	0.16	50	50	ENSMUST00000237805.2	ENSMUSG00000051401.8	Kctd16	chr18	protein_coding	potassium channel tetramerisation domain containing 16
chr18	42008918	42045435	-	42008918;42014350	42014278;42045435	ES	0.5	50	50	ENSMUST00000235606.2	ENSMUSG00000056671.8	Prelid2	chr18	protein_coding	PRELI domain containing 2
chr18	42234866	42244184	+	42234866;42237222	42237127;42244184	ES	0.5	50	50	ENSMUST00000072008.11	ENSMUSG00000057719.12	Sh3rf2	chr18	protein_coding	SH3 domain containing ring finger 2
chr18	42275018	42282676	+	42274163	42282676	A5SS	0.2	50	50	ENSMUST00000072008.11	ENSMUSG00000057719.12	Sh3rf2	chr18	protein_coding	SH3 domain containing ring finger 2
chr18	42275207	42282676	+	42274163	42282676	A5SS	0.2	50	50	ENSMUST00000072008.11	ENSMUSG00000057719.12	Sh3rf2	chr18	protein_coding	SH3 domain containing ring finger 2
chr18	42276230	42282676	+	42274163	42282676	A5SS	0.2	50	50	ENSMUST00000072008.11	ENSMUSG00000057719.12	Sh3rf2	chr18	protein_coding	SH3 domain containing ring finger 2
chr18	42276691	42282676	+	42274163	42282676	A5SS	0.2	50	50	ENSMUST00000072008.11	ENSMUSG00000057719.12	Sh3rf2	chr18	protein_coding	SH3 domain containing ring finger 2
chr18	42275207	42282676	+	42275018	42282676	A5SS	0.2	50	50	ENSMUST00000132681.8	ENSMUSG00000057719.12	Sh3rf2	chr18	protein_coding	SH3 domain containing ring finger 2
chr18	42276230	42282676	+	42275018	42282676	A5SS	0.2	50	50	ENSMUST00000132681.8	ENSMUSG00000057719.12	Sh3rf2	chr18	protein_coding	SH3 domain containing ring finger 2
chr18	42276691	42282676	+	42275018	42282676	A5SS	0.2	50	50	ENSMUST00000132681.8	ENSMUSG00000057719.12	Sh3rf2	chr18	protein_coding	SH3 domain containing ring finger 2
chr18	42276230	42282676	+	42275207	42282676	A5SS	0.2	50	50	ENSMUST00000128066.2	ENSMUSG00000057719.12	Sh3rf2	chr18	protein_coding	SH3 domain containing ring finger 2
chr18	42276691	42282676	+	42275207	42282676	A5SS	0.2	50	50	ENSMUST00000128066.2	ENSMUSG00000057719.12	Sh3rf2	chr18	protein_coding	SH3 domain containing ring finger 2
chr18	42276691	42282676	+	42276230	42282676	A5SS	0.2	50	50	ENSMUST00000237344.2	ENSMUSG00000057719.12	Sh3rf2	chr18	protein_coding	SH3 domain containing ring finger 2
chr18	42351709	42354544	-	42351709;42353013	42352923;42354544	ES	0.5	50	50	ENSMUST00000097590.5	ENSMUSG00000024493.10	Lars	chr18	protein_coding	leucyl-tRNA synthetase
chr18	42379142;42382491	42382387;42383894	-	42379142	42383894	cassetteExon	0.5	100	100	ENSMUST00000097590.5	ENSMUSG00000024493.10	Lars	chr18	protein_coding	leucyl-tRNA synthetase
chr18	42350636	42351569	-	42350673	42351569	A3SS	0.5	50	50	ENSMUST00000097590.5	ENSMUSG00000024493.10	Lars	chr18	protein_coding	leucyl-tRNA synthetase
chr18	42379142;42390259	42390135;42395026	-	42379142	42395026	cassetteExon	0.5	100	100	ENSMUST00000236102.2	ENSMUSG00000024493.10	Lars	chr18	protein_coding	leucyl-tRNA synthetase
chr18	42379142	42382387	-	42379142	42395026	A5SS	0.25	50	50	ENSMUST00000236102.2	ENSMUSG00000024493.10	Lars	chr18	protein_coding	leucyl-tRNA synthetase
chr18	42379142	42383894	-	42379142	42395026	A5SS	0.25	50	50	ENSMUST00000236102.2	ENSMUSG00000024493.10	Lars	chr18	protein_coding	leucyl-tRNA synthetase
chr18	42384445	42390135	-	42379142	42390135	A3SS	0.5	50	50	ENSMUST00000236304.2	ENSMUSG00000024493.10	Lars	chr18	protein_coding	leucyl-tRNA synthetase
chr18	42379142	42382387	-	42379142	42390135	A5SS	0.25	50	50	ENSMUST00000236304.2	ENSMUSG00000024493.10	Lars	chr18	protein_coding	leucyl-tRNA synthetase
chr18	42379142	42383894	-	42379142	42390135	A5SS	0.25	50	50	ENSMUST00000236304.2	ENSMUSG00000024493.10	Lars	chr18	protein_coding	leucyl-tRNA synthetase
chr18	42379142	42395026	-	42390259	42395026	3pMXE	0.5	50	50	ENSMUST00000237520.2	ENSMUSG00000024493.10	Lars	chr18	protein_coding	leucyl-tRNA synthetase
chr18	42453982	42457120	+	42453982;42455273	42454977;42457120	ES	0.5	50	50	ENSMUST00000091920.6	ENSMUSG00000024491.17	Rbm27	chr18	protein_coding	RNA binding motif protein 27
chr18	42438879;42447200	42447036;42450666	+	42438879	42450666	cassetteExon	0.5	100	100	ENSMUST00000091920.6	ENSMUSG00000024491.17	Rbm27	chr18	protein_coding	RNA binding motif protein 27
chr18	42663955	42669243	+	42663955;42668212	42668150;42669243	ES	0.5	50	50	ENSMUST00000237602.2	ENSMUSG00000024498.17	Tcerg1	chr18	protein_coding	transcription elongation regulator 1 (CA150)
chr18	42681622	42683107	+	42681622;42682959	42682903;42683107	ES	0.5	50	50	ENSMUST00000237602.2	ENSMUSG00000024498.17	Tcerg1	chr18	protein_coding	transcription elongation regulator 1 (CA150)
chr18	42683173;42684225	42684175;42685557	+	42683173	42685557	cassetteExon	0.5	100	100	ENSMUST00000237602.2	ENSMUSG00000024498.17	Tcerg1	chr18	protein_coding	transcription elongation regulator 1 (CA150)
chr18	42706425;42707318	42707225;42707583	+	42706425	42707583	cassetteExon	0.5	100	100	ENSMUST00000237602.2	ENSMUSG00000024498.17	Tcerg1	chr18	protein_coding	transcription elongation regulator 1 (CA150)
chr18	42657417	42663695	+	42657417	42663713	A3SS	0.5	50	50	ENSMUST00000237602.2	ENSMUSG00000024498.17	Tcerg1	chr18	protein_coding	transcription elongation regulator 1 (CA150)
chr18	42685773	42686473	+	42685692	42686473	A5SS	0.5	50	50	ENSMUST00000237602.2	ENSMUSG00000024498.17	Tcerg1	chr18	protein_coding	transcription elongation regulator 1 (CA150)
chr18	42874258	43060608	-	42874258	43031810	5pMXE	0.33	50	50	ENSMUST00000136118.8	ENSMUSG00000024500.21	Ppp2r2b	chr18	protein_coding	protein phosphatase 2, regulatory subunit B, beta
chr18	42874258	43192227	-	42874258	43031810	5pMXE	0.33	50	50	ENSMUST00000136118.8	ENSMUSG00000024500.21	Ppp2r2b	chr18	protein_coding	protein phosphatase 2, regulatory subunit B, beta
chr18	42779072	42781739	-	42770992	42781739	A3SS	0.5	50	50	ENSMUST00000136118.8	ENSMUSG00000024500.21	Ppp2r2b	chr18	protein_coding	protein phosphatase 2, regulatory subunit B, beta
chr18	42891784	43031810	-	42874258	43031810	A3SS	0.5	50	50	ENSMUST00000136118.8	ENSMUSG00000024500.21	Ppp2r2b	chr18	protein_coding	protein phosphatase 2, regulatory subunit B, beta
chr18	42874258	43060608	-	42874258	43192227	A5SS	0.33	50	50	ENSMUST00000025377.14	ENSMUSG00000024500.21	Ppp2r2b	chr18	protein_coding	protein phosphatase 2, regulatory subunit B, beta
chr18	43032003	43216143	-	43032003	43032518	5pMXE	0.33	50	50	ENSMUST00000120632.2	ENSMUSG00000024500.21	Ppp2r2b	chr18	protein_coding	protein phosphatase 2, regulatory subunit B, beta
chr18	43032003	43032407	-	43032003	43032518	A5SS	0.33	50	50	ENSMUST00000120632.2	ENSMUSG00000024500.21	Ppp2r2b	chr18	protein_coding	protein phosphatase 2, regulatory subunit B, beta
chr18	43208115	43216143	-	43032003	43216143	A3SS	0.5	50	50	ENSMUST00000239360.2	ENSMUSG00000024500.21	Ppp2r2b	chr18	protein_coding	protein phosphatase 2, regulatory subunit B, beta
chr18	43032003	43032407	-	43032003	43216143	A5SS	0.33	50	50	ENSMUST00000239360.2	ENSMUSG00000024500.21	Ppp2r2b	chr18	protein_coding	protein phosphatase 2, regulatory subunit B, beta
chr18	43208115	43216143	-	43208115	43211846	5pMXE	0.5	50	50	ENSMUST00000236720.2	ENSMUSG00000117792.2	4930588A03Rik	chr18	lncRNA	RIKEN cDNA 4930588A03 gene
chr18	43201925	43208032	-	43072423	43208032	A3SS	0.5	50	50	ENSMUST00000236720.2	ENSMUSG00000117792.2	4930588A03Rik	chr18	lncRNA	RIKEN cDNA 4930588A03 gene
chr18	43295433	43304136	-	43229622	43304136	A3SS	0.5	50	50	ENSMUST00000236277.2	ENSMUSG00000117792.2	4930588A03Rik	chr18	lncRNA	RIKEN cDNA 4930588A03 gene
chr18	43288022	43294900	-	43288022;43291065	43290988;43294900	ES	0.5	50	50	ENSMUST00000237395.2	ENSMUSG00000117792.2	4930588A03Rik	chr18	lncRNA	RIKEN cDNA 4930588A03 gene
chr18	43423138	43438065	+	43423138;43430653	43430564;43438065	ES	0.5	50	50	ENSMUST00000045477.6	ENSMUSG00000039954.10	Stk32a	chr18	protein_coding	serine/threonine kinase 32A
chr18	43394486	43396650	+	43394486	43423101	A3SS	0.5	50	50	ENSMUST00000045477.6	ENSMUSG00000039954.10	Stk32a	chr18	protein_coding	serine/threonine kinase 32A
chr18	43478239	43478556	-	43478239	43486946	A5SS	0.33	50	50	ENSMUST00000121805.9	ENSMUSG00000024501.21	Dpysl3	chr18	protein_coding	dihydropyrimidinase-like 3
chr18	43478239	43478912	-	43478239	43486946	A5SS	0.33	50	50	ENSMUST00000121805.9	ENSMUSG00000024501.21	Dpysl3	chr18	protein_coding	dihydropyrimidinase-like 3
chr18	43496656	43505783	-	43496656	43570895	A5SS	0.25	50	50	ENSMUST00000121805.9	ENSMUSG00000024501.21	Dpysl3	chr18	protein_coding	dihydropyrimidinase-like 3
chr18	43496656	43506131	-	43496656	43570895	A5SS	0.25	50	50	ENSMUST00000121805.9	ENSMUSG00000024501.21	Dpysl3	chr18	protein_coding	dihydropyrimidinase-like 3
chr18	43496656	43526055	-	43496656	43570895	A5SS	0.25	50	50	ENSMUST00000121805.9	ENSMUSG00000024501.21	Dpysl3	chr18	protein_coding	dihydropyrimidinase-like 3
chr18	43496656	43526055	-	43496656	43505783	5pMXE	0.25	50	50	ENSMUST00000237707.2	ENSMUSG00000024501.21	Dpysl3	chr18	protein_coding	dihydropyrimidinase-like 3
chr18	43496656	43506131	-	43496656	43505783	A5SS	0.25	50	50	ENSMUST00000237707.2	ENSMUSG00000024501.21	Dpysl3	chr18	protein_coding	dihydropyrimidinase-like 3
chr18	43496656	43526055	-	43496656	43506131	5pMXE	0.25	50	50	ENSMUST00000118043.8	ENSMUSG00000024501.21	Dpysl3	chr18	protein_coding	dihydropyrimidinase-like 3
chr18	43478239	43478556	-	43478239	43478912	A5SS	0.33	50	50	ENSMUST00000124207.8	ENSMUSG00000024501.21	Dpysl3	chr18	protein_coding	dihydropyrimidinase-like 3
chr18	43665029	43673651	-	43665029;43670791	43670721;43673651	ES	0.5	50	50	ENSMUST00000082254.8	ENSMUSG00000024502.11	Jakmip2	chr18	protein_coding	janus kinase and microtubule interacting protein 2
chr18	43673716	43679869	-	43673716	43680010	A5SS	0.5	50	50	ENSMUST00000082254.8	ENSMUSG00000024502.11	Jakmip2	chr18	protein_coding	janus kinase and microtubule interacting protein 2
chr18	43900031	43900296	+	43899965	43900296	A5SS	0.5	50	50	ENSMUST00000187157.7	ENSMUSG00000038791.15	Scgb3a2	chr18	protein_coding	secretoglobin, family 3A, member 2
chr18	43914329	43917640	-	43914332	43917640	A3SS	0.5	50	50	ENSMUST00000096570.4	ENSMUSG00000071858.5	Gm94	chr18	protein_coding	predicted gene 94
chr18	44207492	44215308	+	44207492;44213247	44213173;44215308	ES	0.5	50	50	ENSMUST00000068473.4	ENSMUSG00000055095.4	Spink6	chr18	protein_coding	serine peptidase inhibitor, Kazal type 6
chr18	44207023	44207470	+	44204593	44207470	A5SS	0.5	50	50	ENSMUST00000068473.4	ENSMUSG00000055095.4	Spink6	chr18	protein_coding	serine peptidase inhibitor, Kazal type 6
chr18	44301228	44307599	-	44301228;44302228	44302182;44307599	ES	0.5	50	50	ENSMUST00000066328.5	ENSMUSG00000053729.5	Spinkl	chr18	protein_coding	serine protease inhibitor, Kazal type-like
chr18	44467223	44469956	+	44467223	44469834	A3SS	0.5	50	50	ENSMUST00000025349.12	ENSMUSG00000024471.13	Myot	chr18	protein_coding	myotilin
chr18	44844811	44857532	-	44667367	44857532	A3SS	0.5	50	50	ENSMUST00000089874.9	ENSMUSG00000071856.11	Mcc	chr18	protein_coding	mutated in colorectal cancers
chr18	44667367	44794765	-	44667367	44857532	A5SS	0.5	50	50	ENSMUST00000089874.9	ENSMUSG00000071856.11	Mcc	chr18	protein_coding	mutated in colorectal cancers
chr18	44795349	44805290	+	44795349;44801957	44801862;44805290	ES	0.5	50	50	ENSMUST00000181094.2	ENSMUSG00000097610.3	A930012L18Rik	chr18	lncRNA	RIKEN cDNA A930012L18 gene
chr18	45006200	45010711	+	45006200	45010685	A3SS	0.5	50	50	ENSMUST00000037763.11	ENSMUSG00000034653.12	Ythdc2	chr18	protein_coding	YTH domain containing 2
chr18	45402483	45534101	+	45402483	45421073	3pMXE	0.5	50	50	ENSMUST00000183623.2	ENSMUSG00000054477.17	Kcnn2	chr18	protein_coding	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2
chr18	45803395	45816138	+	45803395;45810131	45810004;45816138	ES	0.5	50	50	ENSMUST00000183850.8	ENSMUSG00000054477.17	Kcnn2	chr18	protein_coding	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2
chr18	45691555	45692423	+	45691555	45692418	A3SS	0.5	50	50	ENSMUST00000183850.8	ENSMUSG00000054477.17	Kcnn2	chr18	protein_coding	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2
chr18	45694383	45788266	+	45694383	45725073	A3SS&ES	0.5	50	50	ENSMUST00000183850.8	ENSMUSG00000054477.17	Kcnn2	chr18	protein_coding	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2
chr18	45803395	45808322	+	45803395	45810004	A3SS	0.33	50	50	ENSMUST00000183850.8	ENSMUSG00000054477.17	Kcnn2	chr18	protein_coding	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2
chr18	45707833	45725073	+	45694383	45725073	A5SS	0.5	50	50	ENSMUST00000183850.8	ENSMUSG00000054477.17	Kcnn2	chr18	protein_coding	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2
chr18	45803395	45816138	+	45803395	45808322	3pMXE	0.33	50	50	ENSMUST00000167895.2	ENSMUSG00000054477.17	Kcnn2	chr18	protein_coding	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2
chr18	45818625	45970045	-	45818625;45834989	45834935;45970045	ES	0.25	50	50	ENSMUST00000184994.8	ENSMUSG00000098284.9	A330093E20Rik	chr18	lncRNA	RIKEN cDNA A330093E20 gene
chr18	45970150	46177033	-	45970150	46029483	5pMXE	0.25	50	50	ENSMUST00000184994.8	ENSMUSG00000098284.9	A330093E20Rik	chr18	lncRNA	RIKEN cDNA A330093E20 gene
chr18	45874637	45970045	-	45834989	45970045	A3SS	0.25	50	50	ENSMUST00000184994.8	ENSMUSG00000098284.9	A330093E20Rik	chr18	lncRNA	RIKEN cDNA A330093E20 gene
chr18	45962798	45970045	-	45834989	45970045	A3SS	0.25	50	50	ENSMUST00000184994.8	ENSMUSG00000098284.9	A330093E20Rik	chr18	lncRNA	RIKEN cDNA A330093E20 gene
chr18	45970150	45987573	-	45970150	46029483	A5SS	0.25	50	50	ENSMUST00000184994.8	ENSMUSG00000098284.9	A330093E20Rik	chr18	lncRNA	RIKEN cDNA A330093E20 gene
chr18	45970150	45990315	-	45970150	46029483	A5SS	0.25	50	50	ENSMUST00000184994.8	ENSMUSG00000098284.9	A330093E20Rik	chr18	lncRNA	RIKEN cDNA A330093E20 gene
chr18	45970150	45990315	-	45970150;45987668	45987573;45990315	ES	0.5	50	50	ENSMUST00000184346.3	ENSMUSG00000098284.9	A330093E20Rik	chr18	lncRNA	RIKEN cDNA A330093E20 gene
chr18	45874637	45970045	-	45818625	45970045	A3SS	0.25	50	50	ENSMUST00000184346.3	ENSMUSG00000098284.9	A330093E20Rik	chr18	lncRNA	RIKEN cDNA A330093E20 gene
chr18	45962798	45970045	-	45818625	45970045	A3SS	0.25	50	50	ENSMUST00000184346.3	ENSMUSG00000098284.9	A330093E20Rik	chr18	lncRNA	RIKEN cDNA A330093E20 gene
chr18	45970150	45987573	-	45970150	46177033	A5SS	0.25	50	50	ENSMUST00000237850.2	ENSMUSG00000098284.9	A330093E20Rik	chr18	lncRNA	RIKEN cDNA A330093E20 gene
chr18	45970150	45990315	-	45970150	46177033	A5SS	0.25	50	50	ENSMUST00000237850.2	ENSMUSG00000098284.9	A330093E20Rik	chr18	lncRNA	RIKEN cDNA A330093E20 gene
chr18	45962798	45970045	-	45874637	45970045	A3SS	0.5	50	50	ENSMUST00000236654.2	ENSMUSG00000098284.9	A330093E20Rik	chr18	lncRNA	RIKEN cDNA A330093E20 gene
chr18	46300834;46301041	46300960;46302212	-	46300834	46302212	cassetteExon	0.5	100	100	ENSMUST00000037011.6	ENSMUSG00000033949.13	Trim36	chr18	protein_coding	tripartite motif-containing 36
chr18	46329375	46331581	-	46329375	46345369	A5SS	0.5	50	50	ENSMUST00000037011.6	ENSMUSG00000033949.13	Trim36	chr18	protein_coding	tripartite motif-containing 36
chr18	46396024	46413747	-	46396024;46407775	46407657;46413747	ES	0.5	50	50	ENSMUST00000236216.2	ENSMUSG00000024477.5	Pggt1b	chr18	protein_coding	protein geranylgeranyltransferase type I, beta subunit
chr18	46374768;46378319	46378267;46379629	-	46374768	46379629	cassetteExon	0.5	100	100	ENSMUST00000236216.2	ENSMUSG00000024477.5	Pggt1b	chr18	protein_coding	protein geranylgeranyltransferase type I, beta subunit
chr18	46374768;46378916	46378819;46379629	-	46374768	46379629	cassetteExon	0.5	100	100	ENSMUST00000236216.2	ENSMUSG00000024477.5	Pggt1b	chr18	protein_coding	protein geranylgeranyltransferase type I, beta subunit
chr18	46396024	46407653	-	46396024	46407657	A5SS	0.33	50	50	ENSMUST00000236216.2	ENSMUSG00000024477.5	Pggt1b	chr18	protein_coding	protein geranylgeranyltransferase type I, beta subunit
chr18	46396024;46407775	46407653;46413747	-	46396024	46413747	cassetteExon	0.5	100	100	ENSMUST00000025354.5	ENSMUSG00000024477.5	Pggt1b	chr18	protein_coding	protein geranylgeranyltransferase type I, beta subunit
chr18	46379737	46391152	-	46379737	46381938	5pMXE	0.5	50	50	ENSMUST00000236368.2	ENSMUSG00000024477.5	Pggt1b	chr18	protein_coding	protein geranylgeranyltransferase type I, beta subunit
chr18	46374768;46378319	46378267;46379629	-	46374768;46378916	46378819;46379629	MXE	0.5	100	100	ENSMUST00000236368.2	ENSMUSG00000024477.5	Pggt1b	chr18	protein_coding	protein geranylgeranyltransferase type I, beta subunit
chr18	46387391	46391152	-	46379737	46391152	A3SS	0.5	50	50	ENSMUST00000236999.2	ENSMUSG00000024477.5	Pggt1b	chr18	protein_coding	protein geranylgeranyltransferase type I, beta subunit
chr18	46396024	46413747	-	46407775	46413747	3pMXE	0.5	50	50	ENSMUST00000236205.2	ENSMUSG00000024477.5	Pggt1b	chr18	protein_coding	protein geranylgeranyltransferase type I, beta subunit
chr18	46416862	46420417	-	46416862;46418775	46418680;46420417	ES	0.5	50	50	ENSMUST00000072835.7	ENSMUSG00000071855.6	Ccdc112	chr18	protein_coding	coiled-coil domain containing 112
chr18	46424666	46429336	-	46424666;46426560	46426471;46429336	ES	0.5	50	50	ENSMUST00000072835.7	ENSMUSG00000071855.6	Ccdc112	chr18	protein_coding	coiled-coil domain containing 112
chr18	46442370	46444761	-	46432462	46444761	A3SS	0.5	50	50	ENSMUST00000072835.7	ENSMUSG00000071855.6	Ccdc112	chr18	protein_coding	coiled-coil domain containing 112
chr18	46556484	46559920	-	46491235	46559920	A3SS	0.5	50	50	ENSMUST00000237993.2	ENSMUSG00000118002.2	Gm4107	chr18	lncRNA	predicted gene 4107
chr18	46694139	46705868	-	46694139	46721628	A5SS	0.5	50	50	ENSMUST00000036030.14	ENSMUSG00000033184.15	Tmed7	chr18	protein_coding	transmembrane p24 trafficking protein 7
chr18	46730867	46731708	+	46730867;46731223	46731118;46731708	ES	0.5	50	50	ENSMUST00000238168.2	ENSMUSG00000057561.11	Eif1a	chr18	protein_coding	eukaryotic translation initiation factor 1A
chr18	46731767;46732467	46732344;46740571	+	46731767	46740571	cassetteExon	0.5	100	100	ENSMUST00000238168.2	ENSMUSG00000057561.11	Eif1a	chr18	protein_coding	eukaryotic translation initiation factor 1A
chr18	46730867	46731708	+	46731223	46731708	A5SS	0.5	50	50	ENSMUST00000237478.2	ENSMUSG00000057561.11	Eif1a	chr18	protein_coding	eukaryotic translation initiation factor 1A
chr18	46853508	46861040	-	46853508;46856462	46856385;46861040	ES	0.5	50	50	ENSMUST00000035804.9	ENSMUSG00000033022.9	Cdo1	chr18	protein_coding	cysteine dioxygenase 1, cytosolic
chr18	46848882	46853354	-	46848833	46853354	A3SS	0.5	50	50	ENSMUST00000035804.9	ENSMUSG00000033022.9	Cdo1	chr18	protein_coding	cysteine dioxygenase 1, cytosolic
chr18	46853447	46856385	-	46853508	46856385	A3SS	0.33	50	50	ENSMUST00000035804.9	ENSMUSG00000033022.9	Cdo1	chr18	protein_coding	cysteine dioxygenase 1, cytosolic
chr18	46853505	46856385	-	46853508	46856385	A3SS	0.33	50	50	ENSMUST00000035804.9	ENSMUSG00000033022.9	Cdo1	chr18	protein_coding	cysteine dioxygenase 1, cytosolic
chr18	46853447	46856385	-	46853505	46856385	A3SS	0.33	50	50	ENSMUST00000234179.2	ENSMUSG00000033022.9	Cdo1	chr18	protein_coding	cysteine dioxygenase 1, cytosolic
chr18	46853508	46861040	-	46856462	46861040	A3SS&ES	0.5	50	50	ENSMUST00000234179.2	ENSMUSG00000033022.9	Cdo1	chr18	protein_coding	cysteine dioxygenase 1, cytosolic
chr18	46870598	46874344	-	46870598	46874448	A5SS	0.5	50	50	ENSMUST00000035648.6	ENSMUSG00000032905.6	Atg12	chr18	protein_coding	autophagy related 12
chr18	46887529;46890502	46890449;46891070	+	46887529	46891070	cassetteExon	0.5	100	100	ENSMUST00000025357.9	ENSMUSG00000024480.10	Ap3s1	chr18	protein_coding	adaptor-related protein complex 3, sigma 1 subunit
chr18	46913835;46916866	46916826;46922964	+	46913835	46922964	cassetteExon	0.5	100	100	ENSMUST00000025357.9	ENSMUSG00000024480.10	Ap3s1	chr18	protein_coding	adaptor-related protein complex 3, sigma 1 subunit
chr18	46921771	46922964	+	46913835	46922964	A5SS	0.33	50	50	ENSMUST00000025357.9	ENSMUSG00000024480.10	Ap3s1	chr18	protein_coding	adaptor-related protein complex 3, sigma 1 subunit
chr18	46913835	46922964	+	46913835	46916826	3pMXE	0.5	50	50	ENSMUST00000225520.2	ENSMUSG00000024480.10	Ap3s1	chr18	protein_coding	adaptor-related protein complex 3, sigma 1 subunit
chr18	46916866	46922964	+	46916866;46921771	46921724;46922964	ES	0.33	50	50	ENSMUST00000226108.2	ENSMUSG00000024480.10	Ap3s1	chr18	protein_coding	adaptor-related protein complex 3, sigma 1 subunit
chr18	47093573	47100807	+	47093573;47096837	47096727;47100807	ES	0.5	50	50	ENSMUST00000049388.9	ENSMUSG00000042705.10	Commd10	chr18	protein_coding	COMM domain containing 10
chr18	47096837	47123546	+	47096837;47100962	47100807;47123546	ES	0.25	50	50	ENSMUST00000049388.9	ENSMUSG00000042705.10	Commd10	chr18	protein_coding	COMM domain containing 10
chr18	47100962;47111895	47111700;47123546	+	47100962	47123546	cassetteExon	0.5	100	100	ENSMUST00000049388.9	ENSMUSG00000042705.10	Commd10	chr18	protein_coding	COMM domain containing 10
chr18	47093573	47096143	+	47093573	47096727	A3SS	0.25	50	50	ENSMUST00000049388.9	ENSMUSG00000042705.10	Commd10	chr18	protein_coding	COMM domain containing 10
chr18	47123656	47164426	+	47123656	47219319	A3SS	0.33	50	50	ENSMUST00000049388.9	ENSMUSG00000042705.10	Commd10	chr18	protein_coding	COMM domain containing 10
chr18	47123656	47168620	+	47123656	47219319	A3SS	0.33	50	50	ENSMUST00000049388.9	ENSMUSG00000042705.10	Commd10	chr18	protein_coding	COMM domain containing 10
chr18	47093573	47100807	+	47093573	47096143	3pMXE	0.25	50	50	ENSMUST00000234069.2	ENSMUSG00000042705.10	Commd10	chr18	protein_coding	COMM domain containing 10
chr18	47093573	47123546	+	47093573	47096143	3pMXE	0.25	50	50	ENSMUST00000234069.2	ENSMUSG00000042705.10	Commd10	chr18	protein_coding	COMM domain containing 10
chr18	47093573	47123546	+	47093573;47096837	47096727;47123546	ES	0.25	50	50	ENSMUST00000234952.2	ENSMUSG00000042705.10	Commd10	chr18	protein_coding	COMM domain containing 10
chr18	47093573;47100962	47100807;47123546	+	47093573;47096837	47096727;47123546	MXE	0.5	100	100	ENSMUST00000234952.2	ENSMUSG00000042705.10	Commd10	chr18	protein_coding	COMM domain containing 10
chr18	47111895	47123546	+	47096837	47123546	A5SS	0.25	50	50	ENSMUST00000234952.2	ENSMUSG00000042705.10	Commd10	chr18	protein_coding	COMM domain containing 10
chr18	47123656	47240593	+	47123656	47168620	3pMXE	0.25	50	50	ENSMUST00000234961.2	ENSMUSG00000042705.10	Commd10	chr18	protein_coding	COMM domain containing 10
chr18	47123656	47164426	+	47123656	47168620	A3SS	0.25	50	50	ENSMUST00000234961.2	ENSMUSG00000042705.10	Commd10	chr18	protein_coding	COMM domain containing 10
chr18	47123656	47164426	+	47123656	47240593	A3SS	0.25	50	50	ENSMUST00000234124.2	ENSMUSG00000042705.10	Commd10	chr18	protein_coding	COMM domain containing 10
chr18	47123656	47219319	+	47123656	47240593	A3SS	0.25	50	50	ENSMUST00000234124.2	ENSMUSG00000042705.10	Commd10	chr18	protein_coding	COMM domain containing 10
chr18	47093573;47100962	47100807;47123546	+	47093573	47123546	cassetteExon	0.5	100	100	ENSMUST00000234085.2	ENSMUSG00000042705.10	Commd10	chr18	protein_coding	COMM domain containing 10
chr18	47111895	47123546	+	47093573	47123546	A5SS	0.25	50	50	ENSMUST00000234085.2	ENSMUSG00000042705.10	Commd10	chr18	protein_coding	COMM domain containing 10
chr18	47093573	47100807	+	47096837	47100807	5pMXE	0.5	50	50	ENSMUST00000234376.2	ENSMUSG00000042705.10	Commd10	chr18	protein_coding	COMM domain containing 10
chr18	47403840;47409536	47409486;47409653	-	47403840	47409653	cassetteExon	0.5	100	100	ENSMUST00000123228.8	ENSMUSG00000019647.17	Sema6a	chr18	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
chr18	47382651	47403676	-	47368995	47403676	A3SS	0.5	50	50	ENSMUST00000123228.8	ENSMUSG00000019647.17	Sema6a	chr18	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
chr18	47382651	47409653	-	47403840	47409653	A3SS&ES	0.33	50	50	ENSMUST00000123228.8	ENSMUSG00000019647.17	Sema6a	chr18	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
chr18	47403861	47412183	-	47409673	47412183	A3SS&ES	0.5	50	50	ENSMUST00000123228.8	ENSMUSG00000019647.17	Sema6a	chr18	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
chr18	47382651	47409653	-	47382651;47403840	47403676;47409653	ES	0.33	50	50	ENSMUST00000019791.14	ENSMUSG00000019647.17	Sema6a	chr18	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
chr18	47439560	47466259	-	47439560	47501305	A5SS	0.33	50	50	ENSMUST00000019791.14	ENSMUSG00000019647.17	Sema6a	chr18	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
chr18	47439560	47466341	-	47439560	47501305	A5SS	0.33	50	50	ENSMUST00000019791.14	ENSMUSG00000019647.17	Sema6a	chr18	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
chr18	47382651;47409673	47409653;47412183	-	47382651;47403861	47403676;47412183	MXE	0.5	100	100	ENSMUST00000115449.9	ENSMUSG00000019647.17	Sema6a	chr18	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
chr18	47409536	47409653	-	47382651	47409653	A3SS	0.33	50	50	ENSMUST00000076043.13	ENSMUSG00000019647.17	Sema6a	chr18	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
chr18	47439560	47466341	-	47439560	47466259	A5SS	0.33	50	50	ENSMUST00000156422.8	ENSMUSG00000019647.17	Sema6a	chr18	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
chr18	47403840	47409653	-	47409536	47409653	3pMXE	0.33	50	50	ENSMUST00000141224.8	ENSMUSG00000019647.17	Sema6a	chr18	protein_coding	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
chr18	47589604	47607355	+	47589604	47603617	3pMXE	0.5	50	50	ENSMUST00000235070.2	ENSMUSG00000117602.2	9130209A04Rik	chr18	lncRNA	RIKEN cDNA 9130209A04 gene
chr18	48239964	48240214	+	48193027	48240214	A5SS	0.5	50	50	ENSMUST00000237558.2	ENSMUSG00000118267.2	G630055G22Rik	chr18	lncRNA	RIKEN cDNA G630055G22 gene
chr18	49833454	49857180	-	49833454;49856881	49856689;49857180	ES	0.5	50	50	ENSMUST00000163590.9	ENSMUSG00000024505.17	Dtwd2	chr18	protein_coding	DTW domain containing 2
chr18	49861526	49862237	-	49861526	49888388	A5SS	0.5	50	50	ENSMUST00000163590.9	ENSMUSG00000024505.17	Dtwd2	chr18	protein_coding	DTW domain containing 2
chr18	49833454;49857274	49857180;49861436	-	49833454	49861436	cassetteExon	0.5	100	100	ENSMUST00000025383.10	ENSMUSG00000024505.17	Dtwd2	chr18	protein_coding	DTW domain containing 2
chr18	49833454	49856689	-	49833454	49861436	A5SS	0.33	50	50	ENSMUST00000025383.10	ENSMUSG00000024505.17	Dtwd2	chr18	protein_coding	DTW domain containing 2
chr18	50055782;50059048	50058986;50064978	+	50055782	50064978	cassetteExon	0.5	100	100	ENSMUST00000180611.8	ENSMUSG00000037416.14	Dmxl1	chr18	protein_coding	Dmx-like 1
chr18	50036095	50045674	+	50036095	50045710	A3SS	0.5	50	50	ENSMUST00000180611.8	ENSMUSG00000037416.14	Dmxl1	chr18	protein_coding	Dmx-like 1
chr18	50112693	50236935	+	50112693	50223267	3pMXE	0.33	50	50	ENSMUST00000148989.3	ENSMUSG00000062210.14	Tnfaip8	chr18	protein_coding	tumor necrosis factor, alpha-induced protein 8
chr18	50112693	50179439	+	50112693	50223267	A3SS	0.33	50	50	ENSMUST00000148989.3	ENSMUSG00000062210.14	Tnfaip8	chr18	protein_coding	tumor necrosis factor, alpha-induced protein 8
chr18	50152944	50223267	+	50112693	50223267	A5SS	0.25	50	50	ENSMUST00000148989.3	ENSMUSG00000062210.14	Tnfaip8	chr18	protein_coding	tumor necrosis factor, alpha-induced protein 8
chr18	50164430	50223267	+	50112693	50223267	A5SS	0.25	50	50	ENSMUST00000148989.3	ENSMUSG00000062210.14	Tnfaip8	chr18	protein_coding	tumor necrosis factor, alpha-induced protein 8
chr18	50186686	50223267	+	50112693	50223267	A5SS	0.25	50	50	ENSMUST00000148989.3	ENSMUSG00000062210.14	Tnfaip8	chr18	protein_coding	tumor necrosis factor, alpha-induced protein 8
chr18	50112693	50236935	+	50112693	50179439	3pMXE	0.33	50	50	ENSMUST00000087655.6	ENSMUSG00000062210.14	Tnfaip8	chr18	protein_coding	tumor necrosis factor, alpha-induced protein 8
chr18	50164430	50179439	+	50112693	50179439	A5SS	0.5	50	50	ENSMUST00000087655.6	ENSMUSG00000062210.14	Tnfaip8	chr18	protein_coding	tumor necrosis factor, alpha-induced protein 8
chr18	50164430	50223267	+	50152944	50223267	A5SS	0.25	50	50	ENSMUST00000126666.3	ENSMUSG00000062210.14	Tnfaip8	chr18	protein_coding	tumor necrosis factor, alpha-induced protein 8
chr18	50186686	50223267	+	50152944	50223267	A5SS	0.25	50	50	ENSMUST00000126666.3	ENSMUSG00000062210.14	Tnfaip8	chr18	protein_coding	tumor necrosis factor, alpha-induced protein 8
chr18	50164430	50223267	+	50164430	50179439	3pMXE	0.5	50	50	ENSMUST00000124175.2	ENSMUSG00000062210.14	Tnfaip8	chr18	protein_coding	tumor necrosis factor, alpha-induced protein 8
chr18	50186686	50223267	+	50164430	50223267	A5SS	0.25	50	50	ENSMUST00000128377.2	ENSMUSG00000062210.14	Tnfaip8	chr18	protein_coding	tumor necrosis factor, alpha-induced protein 8
chr18	50184899	50185754	+	50184899	50185816	A3SS	0.5	50	50	ENSMUST00000155403.2	ENSMUSG00000062210.14	Tnfaip8	chr18	protein_coding	tumor necrosis factor, alpha-induced protein 8
chr18	50185893	50186364	+	50185815	50186364	A5SS	0.5	50	50	ENSMUST00000134348.8	ENSMUSG00000062210.14	Tnfaip8	chr18	protein_coding	tumor necrosis factor, alpha-induced protein 8
chr18	50180533	50184744	-	50176152	50184744	A3SS	0.5	50	50	ENSMUST00000151719.2	ENSMUSG00000086600.9	C030005K06Rik	chr18	lncRNA	RIKEN cDNA C030005K06 gene
chr18	50185864	50186585	-	50184892	50186585	A3SS	0.33	50	50	ENSMUST00000151719.2	ENSMUSG00000086600.9	C030005K06Rik	chr18	lncRNA	RIKEN cDNA C030005K06 gene
chr18	50186226	50186585	-	50184892	50186585	A3SS	0.33	50	50	ENSMUST00000151719.2	ENSMUSG00000086600.9	C030005K06Rik	chr18	lncRNA	RIKEN cDNA C030005K06 gene
chr18	50186226	50186585	-	50185864	50186585	A3SS	0.33	50	50	ENSMUST00000129164.9	ENSMUSG00000086600.9	C030005K06Rik	chr18	lncRNA	RIKEN cDNA C030005K06 gene
chr18	50261690	50263193	+	50261476	50263193	A5SS	0.5	50	50	ENSMUST00000025385.7	ENSMUSG00000024507.7	Hsd17b4	chr18	protein_coding	hydroxysteroid (17-beta) dehydrogenase 4
chr18	50415319	50415592	+	50415319;50415475	50415461;50415592	ES	0.5	50	50	ENSMUST00000238113.2	ENSMUSG00000035420.8	Fam170a	chr18	protein_coding	family with sequence similarity 170, member A
chr18	50413738	50414558	+	50413662	50414558	A5SS	0.5	50	50	ENSMUST00000238113.2	ENSMUSG00000035420.8	Fam170a	chr18	protein_coding	family with sequence similarity 170, member A
chr18	50415319;50415650	50415461;50415964	+	50415319	50415964	cassetteExon	0.5	100	100	ENSMUST00000039121.4	ENSMUSG00000035420.8	Fam170a	chr18	protein_coding	family with sequence similarity 170, member A
chr18	50415319;50415650	50415592;50415964	+	50415319	50415964	cassetteExon	0.5	100	100	ENSMUST00000039121.4	ENSMUSG00000035420.8	Fam170a	chr18	protein_coding	family with sequence similarity 170, member A
chr18	52046748	52057407	-	52046748;52054907	52054857;52057407	ES	0.5	50	50	ENSMUST00000238114.2	ENSMUSG00000118334.2	Gm50446	chr18	lncRNA	predicted gene, 50446
chr18	52609444	52612499	+	52609444;52611814	52611609;52612499	ES	0.5	50	50	ENSMUST00000237229.2	ENSMUSG00000024528.9	Srfbp1	chr18	protein_coding	serum response factor binding protein 1
chr18	52609444;52612575	52612499;52616705	+	52609444	52616705	cassetteExon	0.5	100	100	ENSMUST00000025406.9	ENSMUSG00000024528.9	Srfbp1	chr18	protein_coding	serum response factor binding protein 1
chr18	52609444	52611609	+	52609444	52616705	A3SS	0.33	50	50	ENSMUST00000025406.9	ENSMUSG00000024528.9	Srfbp1	chr18	protein_coding	serum response factor binding protein 1
chr18	52609444	52616705	+	52609444	52612499	3pMXE	0.33	50	50	ENSMUST00000235538.2	ENSMUSG00000024528.9	Srfbp1	chr18	protein_coding	serum response factor binding protein 1
chr18	52749157	52756936	+	52749157	52771144	A3SS	0.5	50	50	ENSMUST00000072666.4	ENSMUSG00000046886.7	Zfp474	chr18	protein_coding	zinc finger protein 474
chr18	52757920	52771144	+	52749157	52771144	A5SS	0.5	50	50	ENSMUST00000072666.4	ENSMUSG00000046886.7	Zfp474	chr18	protein_coding	zinc finger protein 474
chr18	52757920	52760373	+	52757920	52771144	A3SS	0.5	50	50	ENSMUST00000209270.2	ENSMUSG00000046886.7	Zfp474	chr18	protein_coding	zinc finger protein 474
chr18	52779378	52793463	+	52779378;52789612	52789569;52793463	ES	0.5	50	50	ENSMUST00000118724.8	ENSMUSG00000024532.14	1700034E13Rik	chr18	protein_coding	RIKEN cDNA 1700034E13 gene
chr18	53002479	53018040	+	53002479;53004553	53004374;53018040	ES	0.33	50	50	ENSMUST00000115410.9	ENSMUSG00000024534.16	Sncaip	chr18	protein_coding	synuclein, alpha interacting protein (synphilin)
chr18	52901209	52971036	+	52901022	52971036	A5SS	0.25	50	50	ENSMUST00000115410.9	ENSMUSG00000024534.16	Sncaip	chr18	protein_coding	synuclein, alpha interacting protein (synphilin)
chr18	52901530	52971036	+	52901022	52971036	A5SS	0.25	50	50	ENSMUST00000115410.9	ENSMUSG00000024534.16	Sncaip	chr18	protein_coding	synuclein, alpha interacting protein (synphilin)
chr18	52902130	52971036	+	52901022	52971036	A5SS	0.25	50	50	ENSMUST00000115410.9	ENSMUSG00000024534.16	Sncaip	chr18	protein_coding	synuclein, alpha interacting protein (synphilin)
chr18	53040549	53048379	+	53040546	53048379	A5SS	0.33	50	50	ENSMUST00000115410.9	ENSMUSG00000024534.16	Sncaip	chr18	protein_coding	synuclein, alpha interacting protein (synphilin)
chr18	53041752	53048379	+	53040546	53048379	A5SS	0.33	50	50	ENSMUST00000115410.9	ENSMUSG00000024534.16	Sncaip	chr18	protein_coding	synuclein, alpha interacting protein (synphilin)
chr18	53040549	53048379	+	53040549;53041752	53041682;53048379	ES	0.33	50	50	ENSMUST00000178678.8	ENSMUSG00000024534.16	Sncaip	chr18	protein_coding	synuclein, alpha interacting protein (synphilin)
chr18	52901530	52971036	+	52901209	52971036	A5SS	0.25	50	50	ENSMUST00000025413.14	ENSMUSG00000024534.16	Sncaip	chr18	protein_coding	synuclein, alpha interacting protein (synphilin)
chr18	52902130	52971036	+	52901209	52971036	A5SS	0.25	50	50	ENSMUST00000025413.14	ENSMUSG00000024534.16	Sncaip	chr18	protein_coding	synuclein, alpha interacting protein (synphilin)
chr18	52902130	52971036	+	52901530	52971036	A5SS	0.25	50	50	ENSMUST00000178011.8	ENSMUSG00000024534.16	Sncaip	chr18	protein_coding	synuclein, alpha interacting protein (synphilin)
chr18	52971138	53027906	+	52971138;52984583	52984511;53027906	ES	0.33	50	50	ENSMUST00000177861.8	ENSMUSG00000024534.16	Sncaip	chr18	protein_coding	synuclein, alpha interacting protein (synphilin)
chr18	52984583;53018153	53018040;53027906	+	52984583	53027906	cassetteExon	0.5	100	100	ENSMUST00000177861.8	ENSMUSG00000024534.16	Sncaip	chr18	protein_coding	synuclein, alpha interacting protein (synphilin)
chr18	52984583	53001611	+	52984583	53027906	A3SS	0.33	50	50	ENSMUST00000177861.8	ENSMUSG00000024534.16	Sncaip	chr18	protein_coding	synuclein, alpha interacting protein (synphilin)
chr18	52984583	53001611	+	52984583	53018040	A3SS	0.33	50	50	ENSMUST00000178883.8	ENSMUSG00000024534.16	Sncaip	chr18	protein_coding	synuclein, alpha interacting protein (synphilin)
chr18	53002479	53018040	+	52984583	53018040	A5SS	0.33	50	50	ENSMUST00000178883.8	ENSMUSG00000024534.16	Sncaip	chr18	protein_coding	synuclein, alpha interacting protein (synphilin)
chr18	53004553	53018040	+	52984583	53018040	A5SS	0.33	50	50	ENSMUST00000178883.8	ENSMUSG00000024534.16	Sncaip	chr18	protein_coding	synuclein, alpha interacting protein (synphilin)
chr18	52984583	53018040	+	52984583;53002479	53001611;53018040	ES	0.33	50	50	ENSMUST00000179625.8	ENSMUSG00000024534.16	Sncaip	chr18	protein_coding	synuclein, alpha interacting protein (synphilin)
chr18	53018153	53027906	+	52971138	53027906	A5SS	0.33	50	50	ENSMUST00000179689.2	ENSMUSG00000024534.16	Sncaip	chr18	protein_coding	synuclein, alpha interacting protein (synphilin)
chr18	53322844	53330927	+	53322844;53327665	53327502;53330927	ES	0.5	50	50	ENSMUST00000037850.7	ENSMUSG00000034484.9	Snx2	chr18	protein_coding	sorting nexin 2
chr18	53322844;53326840	53326819;53327502	+	53322844	53327502	cassetteExon	0.5	100	100	ENSMUST00000037850.7	ENSMUSG00000034484.9	Snx2	chr18	protein_coding	sorting nexin 2
chr18	53309559	53322664	+	53309559	53322727	A3SS	0.5	50	50	ENSMUST00000037850.7	ENSMUSG00000034484.9	Snx2	chr18	protein_coding	sorting nexin 2
chr18	53322844	53326819	+	53322844	53330927	A3SS	0.33	50	50	ENSMUST00000236911.2	ENSMUSG00000034484.9	Snx2	chr18	protein_coding	sorting nexin 2
chr18	53322844	53330927	+	53322844	53327502	3pMXE	0.33	50	50	ENSMUST00000235943.2	ENSMUSG00000034484.9	Snx2	chr18	protein_coding	sorting nexin 2
chr18	53378924;53433861	53433815;53460484	+	53378924	53460484	cassetteExon	0.5	100	100	ENSMUST00000165032.9	ENSMUSG00000024535.17	Snx24	chr18	protein_coding	sorting nexing 24
chr18	53473306	53473627	+	53473306	53516142	A3SS	0.5	50	50	ENSMUST00000165032.9	ENSMUSG00000024535.17	Snx24	chr18	protein_coding	sorting nexing 24
chr18	53606245	53606493	+	53598234	53606493	A5SS	0.5	50	50	ENSMUST00000091900.11	ENSMUSG00000069378.15	Prdm6	chr18	protein_coding	PR domain containing 6
chr18	53669091	53669684	+	53606800	53669684	A5SS	0.5	50	50	ENSMUST00000091900.11	ENSMUSG00000069378.15	Prdm6	chr18	protein_coding	PR domain containing 6
chr18	53684716	53685119	+	53673394	53685119	A5SS	0.5	50	50	ENSMUST00000091900.11	ENSMUSG00000069378.15	Prdm6	chr18	protein_coding	PR domain containing 6
chr18	53781442	53825919	+	53772261	53825919	A5SS	0.5	50	50	ENSMUST00000236653.2	ENSMUSG00000118362.2	Gm19466	chr18	lncRNA	predicted gene, 19466
chr18	54081226	54086317	+	54081226;54081740	54081717;54086317	ES	0.5	50	50	ENSMUST00000069597.8	ENSMUSG00000073563.4	Csnk1g3	chr18	protein_coding	casein kinase 1, gamma 3
chr18	54066617;54070020	54069925;54081120	+	54066617	54081120	cassetteExon	0.5	100	100	ENSMUST00000069597.8	ENSMUSG00000073563.4	Csnk1g3	chr18	protein_coding	casein kinase 1, gamma 3
chr18	54081226	54086317	+	54081226	54081717	3pMXE	0.5	50	50	ENSMUST00000236399.2	ENSMUSG00000073563.4	Csnk1g3	chr18	protein_coding	casein kinase 1, gamma 3
chr18	55033372	55120683	-	55033372;55079880	55079625;55120683	ES	0.5	50	50	ENSMUST00000064763.7	ENSMUSG00000052713.10	Zfp608	chr18	protein_coding	zinc finger protein 608
chr18	55121778	55125352	-	55121778	55122900	5pMXE	0.5	50	50	ENSMUST00000064763.7	ENSMUSG00000052713.10	Zfp608	chr18	protein_coding	zinc finger protein 608
chr18	55079880	55089658	-	55079880	55120683	A5SS	0.5	50	50	ENSMUST00000064763.7	ENSMUSG00000052713.10	Zfp608	chr18	protein_coding	zinc finger protein 608
chr18	55123406	55178391	+	55123406	55124276	3pMXE	0.5	50	50	ENSMUST00000237582.2	ENSMUSG00000096948.3	Gm4221	chr18	lncRNA	predicted gene 4221
chr18	55190708	55209551	+	55181998	55209551	A5SS	0.5	50	50	ENSMUST00000181538.2	ENSMUSG00000096948.3	Gm4221	chr18	lncRNA	predicted gene 4221
chr18	56533647	56602605	+	56533647;56565429	56565191;56602605	ES	0.33	50	50	ENSMUST00000237355.2	ENSMUSG00000001700.11	Gramd3	chr18	protein_coding	GRAM domain containing 3
chr18	56552397	56602605	+	56565429	56602605	A5SS&ES	0.33	50	50	ENSMUST00000237355.2	ENSMUSG00000001700.11	Gramd3	chr18	protein_coding	GRAM domain containing 3
chr18	56552397	56602605	+	56533647	56602605	A5SS	0.33	50	50	ENSMUST00000237422.2	ENSMUSG00000001700.11	Gramd3	chr18	protein_coding	GRAM domain containing 3
chr18	56533647	56602605	+	56565429	56602605	5pMXE	0.33	50	50	ENSMUST00000070166.6	ENSMUSG00000001700.11	Gramd3	chr18	protein_coding	GRAM domain containing 3
chr18	56692359	56695105	-	56692359;56693901	56693848;56695105	ES	0.5	50	50	ENSMUST00000174518.8	ENSMUSG00000053644.14	Aldh7a1	chr18	protein_coding	aldehyde dehydrogenase family 7, member A1
chr18	56671814	56675325	-	56671814	56675297	A5SS	0.5	50	50	ENSMUST00000174518.8	ENSMUSG00000053644.14	Aldh7a1	chr18	protein_coding	aldehyde dehydrogenase family 7, member A1
chr18	56667346	56670276	-	56665169	56670276	A3SS	0.5	50	50	ENSMUST00000172734.8	ENSMUSG00000053644.14	Aldh7a1	chr18	protein_coding	aldehyde dehydrogenase family 7, member A1
chr18	56665169	56665560	-	56665169	56670276	A5SS	0.5	50	50	ENSMUST00000172734.8	ENSMUSG00000053644.14	Aldh7a1	chr18	protein_coding	aldehyde dehydrogenase family 7, member A1
chr18	56695707	56708534	+	56695795	56708534	A5SS	0.33	50	50	ENSMUST00000130163.8	ENSMUSG00000008301.12	Phax	chr18	protein_coding	phosphorylated adaptor for RNA export
chr18	56706207	56708534	+	56695795	56708534	A5SS	0.33	50	50	ENSMUST00000130163.8	ENSMUSG00000008301.12	Phax	chr18	protein_coding	phosphorylated adaptor for RNA export
chr18	56706207	56708534	+	56695707	56708534	A5SS	0.33	50	50	ENSMUST00000132628.8	ENSMUSG00000008301.12	Phax	chr18	protein_coding	phosphorylated adaptor for RNA export
chr18	56721542;56722654	56722530;56725449	+	56721542	56725449	cassetteExon	0.5	100	100	ENSMUST00000035640.13	ENSMUSG00000032900.16	Tex43	chr18	protein_coding	testis expressed 43
chr18	56725557	56727681	+	56725557	56727520	A3SS	0.5	50	50	ENSMUST00000035640.13	ENSMUSG00000032900.16	Tex43	chr18	protein_coding	testis expressed 43
chr18	56724003	56725449	+	56721542	56725449	A5SS	0.33	50	50	ENSMUST00000035640.13	ENSMUSG00000032900.16	Tex43	chr18	protein_coding	testis expressed 43
chr18	56724003	56725449	+	56722654	56725449	A5SS	0.33	50	50	ENSMUST00000153248.2	ENSMUSG00000032900.16	Tex43	chr18	protein_coding	testis expressed 43
chr18	56909180	56916091	-	56895640	56916091	A3SS	0.5	50	50	ENSMUST00000102912.8	ENSMUSG00000032656.15	Marchf3	chr18	protein_coding	membrane associated ring-CH-type finger 3
chr18	57095590;57100261	57100165;57106456	-	57095590	57106456	cassetteExon	0.5	100	100	ENSMUST00000025488.15	ENSMUSG00000024592.16	C330018D20Rik	chr18	protein_coding	RIKEN cDNA C330018D20 gene
chr18	57106015	57106456	-	57095590	57106456	A3SS	0.33	50	50	ENSMUST00000025488.15	ENSMUSG00000024592.16	C330018D20Rik	chr18	protein_coding	RIKEN cDNA C330018D20 gene
chr18	57106556	57108137	-	57106556	57108406	A5SS	0.33	50	50	ENSMUST00000025488.15	ENSMUSG00000024592.16	C330018D20Rik	chr18	protein_coding	RIKEN cDNA C330018D20 gene
chr18	57106556	57108382	-	57106556	57108406	A5SS	0.33	50	50	ENSMUST00000025488.15	ENSMUSG00000024592.16	C330018D20Rik	chr18	protein_coding	RIKEN cDNA C330018D20 gene
chr18	57106015	57106456	-	57100261	57106456	A3SS	0.33	50	50	ENSMUST00000139243.9	ENSMUSG00000024592.16	C330018D20Rik	chr18	protein_coding	RIKEN cDNA C330018D20 gene
chr18	57106556	57108137	-	57106556	57108382	A5SS	0.33	50	50	ENSMUST00000139243.9	ENSMUSG00000024592.16	C330018D20Rik	chr18	protein_coding	RIKEN cDNA C330018D20 gene
chr18	57276061	57313541	+	57266802	57313541	A5SS	0.5	50	50	ENSMUST00000075770.13	ENSMUSG00000024593.16	Megf10	chr18	protein_coding	multiple EGF-like-domains 10
chr18	57488712	57495505	+	57487963	57495505	A5SS	0.5	50	50	ENSMUST00000025490.10	ENSMUSG00000024594.10	Prrc1	chr18	protein_coding	proline-rich coiled-coil 1
chr18	57507099	57507599	+	57504541	57507599	A5SS	0.33	50	50	ENSMUST00000025490.10	ENSMUSG00000024594.10	Prrc1	chr18	protein_coding	proline-rich coiled-coil 1
chr18	57507155	57507599	+	57504541	57507599	A5SS	0.33	50	50	ENSMUST00000025490.10	ENSMUSG00000024594.10	Prrc1	chr18	protein_coding	proline-rich coiled-coil 1
chr18	57507099	57507599	+	57507155	57507599	A5SS	0.33	50	50	ENSMUST00000236755.2	ENSMUSG00000024594.10	Prrc1	chr18	protein_coding	proline-rich coiled-coil 1
chr18	57681447;57682308	57682156;57685179	-	57681447	57685179	cassetteExon	0.5	100	100	ENSMUST00000130696.8	ENSMUSG00000086607.8	4930511M06Rik	chr18	lncRNA	RIKEN cDNA 4930511M06 gene
chr18	57639231	57681351	-	57568053	57681351	A3SS	0.33	50	50	ENSMUST00000130696.8	ENSMUSG00000086607.8	4930511M06Rik	chr18	lncRNA	RIKEN cDNA 4930511M06 gene
chr18	57678937	57681351	-	57568053	57681351	A3SS	0.33	50	50	ENSMUST00000130696.8	ENSMUSG00000086607.8	4930511M06Rik	chr18	lncRNA	RIKEN cDNA 4930511M06 gene
chr18	57681447	57684767	-	57681447	57685179	A5SS	0.33	50	50	ENSMUST00000130696.8	ENSMUSG00000086607.8	4930511M06Rik	chr18	lncRNA	RIKEN cDNA 4930511M06 gene
chr18	57678937	57681351	-	57639231	57681351	A3SS	0.33	50	50	ENSMUST00000130724.8	ENSMUSG00000086607.8	4930511M06Rik	chr18	lncRNA	RIKEN cDNA 4930511M06 gene
chr18	57639231	57666498	-	57639231	57681351	A5SS	0.5	50	50	ENSMUST00000130724.8	ENSMUSG00000086607.8	4930511M06Rik	chr18	lncRNA	RIKEN cDNA 4930511M06 gene
chr18	57681447	57682156	-	57681447	57684767	A5SS	0.33	50	50	ENSMUST00000130724.8	ENSMUSG00000086607.8	4930511M06Rik	chr18	lncRNA	RIKEN cDNA 4930511M06 gene
chr18	57682308	57685179	-	57682308	57684819	5pMXE	0.5	50	50	ENSMUST00000153884.8	ENSMUSG00000086607.8	4930511M06Rik	chr18	lncRNA	RIKEN cDNA 4930511M06 gene
chr18	57601908;57605768	57605684;57610086	+	57601908	57610086	cassetteExon	0.5	100	100	ENSMUST00000091892.4	ENSMUSG00000069372.4	Ctxn3	chr18	protein_coding	cortexin 3
chr18	57605603	57605684	+	57601908	57605684	A5SS	0.5	50	50	ENSMUST00000209782.2	ENSMUSG00000069372.4	Ctxn3	chr18	protein_coding	cortexin 3
chr18	57639231	57666498	-	57638127	57666498	A3SS	0.25	50	50	ENSMUST00000150994.2	ENSMUSG00000085800.8	1700066O22Rik	chr18	lncRNA	RIKEN cDNA 1700066O22 gene
chr18	57664112	57666498	-	57638127	57666498	A3SS	0.25	50	50	ENSMUST00000150994.2	ENSMUSG00000085800.8	1700066O22Rik	chr18	lncRNA	RIKEN cDNA 1700066O22 gene
chr18	57666028	57666498	-	57638127	57666498	A3SS	0.25	50	50	ENSMUST00000150994.2	ENSMUSG00000085800.8	1700066O22Rik	chr18	lncRNA	RIKEN cDNA 1700066O22 gene
chr18	57664112	57666498	-	57639231	57666498	A3SS	0.25	50	50	ENSMUST00000151669.8	ENSMUSG00000085800.8	1700066O22Rik	chr18	lncRNA	RIKEN cDNA 1700066O22 gene
chr18	57666028	57666498	-	57639231	57666498	A3SS	0.25	50	50	ENSMUST00000151669.8	ENSMUSG00000085800.8	1700066O22Rik	chr18	lncRNA	RIKEN cDNA 1700066O22 gene
chr18	57664112	57666498	-	57666028	57666498	A3SS&ES	0.5	50	50	ENSMUST00000133147.8	ENSMUSG00000085800.8	1700066O22Rik	chr18	lncRNA	RIKEN cDNA 1700066O22 gene
chr18	57727207	57863787	+	57727207;57800439	57800307;57863787	ES	0.5	50	50	ENSMUST00000079738.10	ENSMUSG00000058925.12	Ccdc192	chr18	protein_coding	coiled-coil domain containing 192
chr18	57697114	57699796	+	57697114	57725040	A3SS	0.5	50	50	ENSMUST00000079738.10	ENSMUSG00000058925.12	Ccdc192	chr18	protein_coding	coiled-coil domain containing 192
chr18	57696363	57697016	+	57671156	57697016	A5SS	0.5	50	50	ENSMUST00000079738.10	ENSMUSG00000058925.12	Ccdc192	chr18	protein_coding	coiled-coil domain containing 192
chr18	57879932	57880493	-	57873500	57880493	A3SS	0.5	50	50	ENSMUST00000236816.2	ENSMUSG00000118391.2	Gm19519	chr18	lncRNA	predicted gene, 19519
chr18	57908889	57912322	-	57880591	57912322	A3SS	0.33	50	50	ENSMUST00000236816.2	ENSMUSG00000118391.2	Gm19519	chr18	lncRNA	predicted gene, 19519
chr18	57912165	57912322	-	57880591	57912322	A3SS	0.33	50	50	ENSMUST00000236816.2	ENSMUSG00000118391.2	Gm19519	chr18	lncRNA	predicted gene, 19519
chr18	57912431	57912563	-	57912431	57925375	A5SS	0.5	50	50	ENSMUST00000236816.2	ENSMUSG00000118391.2	Gm19519	chr18	lncRNA	predicted gene, 19519
chr18	57908889	57912322	-	57908889;57912165	57911472;57912322	ES	0.5	50	50	ENSMUST00000235775.2	ENSMUSG00000118391.2	Gm19519	chr18	lncRNA	predicted gene, 19519
chr18	57912165	57912322	-	57908889	57912322	A3SS	0.33	50	50	ENSMUST00000236807.2	ENSMUSG00000118391.2	Gm19519	chr18	lncRNA	predicted gene, 19519
chr18	57908889	57911472	-	57908889	57912322	A5SS	0.5	50	50	ENSMUST00000236807.2	ENSMUSG00000118391.2	Gm19519	chr18	lncRNA	predicted gene, 19519
chr18	58245688	58246319	-	58239485	58246319	A3SS	0.5	50	50	ENSMUST00000025497.8	ENSMUSG00000024598.10	Fbn2	chr18	protein_coding	fibrillin 2
chr18	58319006	58323313	-	58287029	58323313	A3SS	0.5	50	50	ENSMUST00000025497.8	ENSMUSG00000024598.10	Fbn2	chr18	protein_coding	fibrillin 2
chr18	58792869	58804520	+	58792869;58804399	58804280;58804520	ES	0.5	50	50	ENSMUST00000025503.10	ENSMUSG00000024601.10	Isoc1	chr18	protein_coding	isochorismatase domain containing 1
chr18	59105901;59108634	59108501;59118313	+	59105901	59118313	cassetteExon	0.5	100	100	ENSMUST00000052907.7	ENSMUSG00000053441.6	Adamts19	chr18	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 19
chr18	59101925	59103032	+	59101925	59102955	A3SS	0.5	50	50	ENSMUST00000052907.7	ENSMUSG00000053441.6	Adamts19	chr18	protein_coding	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 19
chr18	59198957	59205265	+	59198957;59200061	59200001;59205265	ES	0.33	50	50	ENSMUST00000117064.8	ENSMUSG00000050875.12	Minar2	chr18	protein_coding	membrane integral NOTCH2 associated receptor 2
chr18	59195634	59199982	+	59195634	59198907	A3SS&ES	0.33	50	50	ENSMUST00000117064.8	ENSMUSG00000050875.12	Minar2	chr18	protein_coding	membrane integral NOTCH2 associated receptor 2
chr18	59198957	59199889	+	59198957	59200001	A3SS	0.25	50	50	ENSMUST00000117064.8	ENSMUSG00000050875.12	Minar2	chr18	protein_coding	membrane integral NOTCH2 associated receptor 2
chr18	59198957	59199982	+	59198957	59200001	A3SS	0.25	50	50	ENSMUST00000117064.8	ENSMUSG00000050875.12	Minar2	chr18	protein_coding	membrane integral NOTCH2 associated receptor 2
chr18	59195634;59198957	59198907;59205265	+	59195634	59205265	cassetteExon	0.5	100	100	ENSMUST00000165666.9	ENSMUSG00000050875.12	Minar2	chr18	protein_coding	membrane integral NOTCH2 associated receptor 2
chr18	59195634;59200061	59199982;59205265	+	59195634	59205265	cassetteExon	0.5	100	100	ENSMUST00000165666.9	ENSMUSG00000050875.12	Minar2	chr18	protein_coding	membrane integral NOTCH2 associated receptor 2
chr18	59195634	59199982	+	59195634;59198957	59198907;59199982	ES	0.5	50	50	ENSMUST00000058633.9	ENSMUSG00000050875.12	Minar2	chr18	protein_coding	membrane integral NOTCH2 associated receptor 2
chr18	59198957	59205265	+	59198957;59200061	59199982;59205265	ES	0.33	50	50	ENSMUST00000058633.9	ENSMUSG00000050875.12	Minar2	chr18	protein_coding	membrane integral NOTCH2 associated receptor 2
chr18	59198957	59199889	+	59198957	59199982	A3SS	0.25	50	50	ENSMUST00000058633.9	ENSMUSG00000050875.12	Minar2	chr18	protein_coding	membrane integral NOTCH2 associated receptor 2
chr18	59195634;59200061	59199982;59205265	+	59195634;59198957	59198907;59205265	MXE	0.5	100	100	ENSMUST00000175897.8	ENSMUSG00000050875.12	Minar2	chr18	protein_coding	membrane integral NOTCH2 associated receptor 2
chr18	59198957;59200061	59199889;59205265	+	59198957	59205265	cassetteExon	0.5	100	100	ENSMUST00000175897.8	ENSMUSG00000050875.12	Minar2	chr18	protein_coding	membrane integral NOTCH2 associated receptor 2
chr18	59195634	59205265	+	59195634;59200061	59198907;59205265	ES	0.33	50	50	ENSMUST00000154125.2	ENSMUSG00000050875.12	Minar2	chr18	protein_coding	membrane integral NOTCH2 associated receptor 2
chr18	59198957	59205265	+	59200061	59205265	A5SS	0.33	50	50	ENSMUST00000154125.2	ENSMUSG00000050875.12	Minar2	chr18	protein_coding	membrane integral NOTCH2 associated receptor 2
chr18	60509202	60515684	+	60509202	60510519	3pMXE	0.25	50	50	ENSMUST00000237794.2	ENSMUSG00000054072.13	Iigp1	chr18	protein_coding	interferon inducible GTPase 1
chr18	60509202	60522864	+	60509202	60510519	3pMXE	0.25	50	50	ENSMUST00000237794.2	ENSMUSG00000054072.13	Iigp1	chr18	protein_coding	interferon inducible GTPase 1
chr18	60509202	60510834	+	60509202	60510519	A3SS	0.25	50	50	ENSMUST00000237794.2	ENSMUSG00000054072.13	Iigp1	chr18	protein_coding	interferon inducible GTPase 1
chr18	60509202	60522864	+	60509202;60515866	60515684;60522864	ES	0.5	50	50	ENSMUST00000032473.7	ENSMUSG00000054072.13	Iigp1	chr18	protein_coding	interferon inducible GTPase 1
chr18	60509202	60510834	+	60509202	60515684	A3SS	0.25	50	50	ENSMUST00000032473.7	ENSMUSG00000054072.13	Iigp1	chr18	protein_coding	interferon inducible GTPase 1
chr18	60509202	60510834	+	60509202	60522864	A3SS	0.25	50	50	ENSMUST00000066912.13	ENSMUSG00000054072.13	Iigp1	chr18	protein_coding	interferon inducible GTPase 1
chr18	60509202	60522864	+	60515866	60522864	5pMXE	0.5	50	50	ENSMUST00000237185.2	ENSMUSG00000054072.13	Iigp1	chr18	protein_coding	interferon inducible GTPase 1
chr18	60677218	60678820	+	60677218;60678449	60678429;60678820	ES	0.5	50	50	ENSMUST00000223984.2	ENSMUSG00000024603.9	Dctn4	chr18	protein_coding	dynactin 4
chr18	60659437	60659673	+	60659437	60667665	A3SS	0.5	50	50	ENSMUST00000223984.2	ENSMUSG00000024603.9	Dctn4	chr18	protein_coding	dynactin 4
chr18	60737562	60757561	-	60737562	60757243	5pMXE	0.16	50	50	ENSMUST00000097566.10	ENSMUSG00000043079.18	Synpo	chr18	protein_coding	synaptopodin
chr18	60737562	60762524	-	60737562	60757243	5pMXE	0.16	50	50	ENSMUST00000097566.10	ENSMUSG00000043079.18	Synpo	chr18	protein_coding	synaptopodin
chr18	60737562;60743073	60742979;60757243	-	60737562	60757243	cassetteExon	0.5	100	100	ENSMUST00000097566.10	ENSMUSG00000043079.18	Synpo	chr18	protein_coding	synaptopodin
chr18	60737562;60743073	60742983;60757243	-	60737562	60757243	cassetteExon	0.5	100	100	ENSMUST00000097566.10	ENSMUSG00000043079.18	Synpo	chr18	protein_coding	synaptopodin
chr18	60729560	60733467	-	60729560	60735185	A5SS	0.33	50	50	ENSMUST00000097566.10	ENSMUSG00000043079.18	Synpo	chr18	protein_coding	synaptopodin
chr18	60729560	60735305	-	60729560	60735185	A5SS	0.33	50	50	ENSMUST00000097566.10	ENSMUSG00000043079.18	Synpo	chr18	protein_coding	synaptopodin
chr18	60737562	60756303	-	60737562	60757243	A5SS	0.16	50	50	ENSMUST00000097566.10	ENSMUSG00000043079.18	Synpo	chr18	protein_coding	synaptopodin
chr18	60737562	60762524	-	60737562	60757561	5pMXE	0.16	50	50	ENSMUST00000130044.2	ENSMUSG00000043079.18	Synpo	chr18	protein_coding	synaptopodin
chr18	60737562	60742979	-	60737562	60757561	A5SS	0.16	50	50	ENSMUST00000130044.2	ENSMUSG00000043079.18	Synpo	chr18	protein_coding	synaptopodin
chr18	60737562	60742983	-	60737562	60757561	A5SS	0.16	50	50	ENSMUST00000130044.2	ENSMUSG00000043079.18	Synpo	chr18	protein_coding	synaptopodin
chr18	60737562	60756303	-	60737562	60757561	A5SS	0.16	50	50	ENSMUST00000130044.2	ENSMUSG00000043079.18	Synpo	chr18	protein_coding	synaptopodin
chr18	60740096	60762524	-	60737562	60762524	A3SS	0.5	50	50	ENSMUST00000130360.2	ENSMUSG00000043079.18	Synpo	chr18	protein_coding	synaptopodin
chr18	60729560	60733467	-	60729560	60735305	A5SS	0.33	50	50	ENSMUST00000130360.2	ENSMUSG00000043079.18	Synpo	chr18	protein_coding	synaptopodin
chr18	60737562	60742979	-	60737562	60762524	A5SS	0.16	50	50	ENSMUST00000130360.2	ENSMUSG00000043079.18	Synpo	chr18	protein_coding	synaptopodin
chr18	60737562	60742983	-	60737562	60762524	A5SS	0.16	50	50	ENSMUST00000130360.2	ENSMUSG00000043079.18	Synpo	chr18	protein_coding	synaptopodin
chr18	60737562	60756303	-	60737562	60762524	A5SS	0.16	50	50	ENSMUST00000130360.2	ENSMUSG00000043079.18	Synpo	chr18	protein_coding	synaptopodin
chr18	60737562	60742979	-	60737562	60742983	A5SS	0.25	50	50	ENSMUST00000155195.3	ENSMUSG00000043079.18	Synpo	chr18	protein_coding	synaptopodin
chr18	60737562	60756303	-	60737562	60742983	A5SS&ES	0.25	50	50	ENSMUST00000155195.3	ENSMUSG00000043079.18	Synpo	chr18	protein_coding	synaptopodin
chr18	60737562	60757243	-	60737562	60742983	5pMXE	0.16	50	50	ENSMUST00000115318.4	ENSMUSG00000043079.18	Synpo	chr18	protein_coding	synaptopodin
chr18	60763157	60785995	-	60763157	60781268	5pMXE	0.33	50	50	ENSMUST00000143275.3	ENSMUSG00000043079.18	Synpo	chr18	protein_coding	synaptopodin
chr18	60778866	60781268	-	60763157	60781268	A3SS	0.5	50	50	ENSMUST00000143275.3	ENSMUSG00000043079.18	Synpo	chr18	protein_coding	synaptopodin
chr18	60763157	60781291	-	60763157	60781268	A5SS	0.33	50	50	ENSMUST00000143275.3	ENSMUSG00000043079.18	Synpo	chr18	protein_coding	synaptopodin
chr18	60737562	60742979	-	60737562	60756303	A5SS	0.16	50	50	ENSMUST00000123288.2	ENSMUSG00000043079.18	Synpo	chr18	protein_coding	synaptopodin
chr18	60763157	60781291	-	60763157	60785995	A5SS	0.33	50	50	ENSMUST00000137894.2	ENSMUSG00000043079.18	Synpo	chr18	protein_coding	synaptopodin
chr18	60846704	60866080	-	60846704	60860553	5pMXE	0.25	50	50	ENSMUST00000235795.2	ENSMUSG00000054008.10	Ndst1	chr18	protein_coding	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
chr18	60846704	60881383	-	60846704	60860553	5pMXE	0.25	50	50	ENSMUST00000235795.2	ENSMUSG00000054008.10	Ndst1	chr18	protein_coding	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
chr18	60846704	60881573	-	60846704	60860553	5pMXE	0.25	50	50	ENSMUST00000235795.2	ENSMUSG00000054008.10	Ndst1	chr18	protein_coding	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
chr18	60824359	60828408	-	60824359;60825171	60825001;60828408	ES	0.5	50	50	ENSMUST00000237783.2	ENSMUSG00000054008.10	Ndst1	chr18	protein_coding	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
chr18	60846704	60866080	-	60846704	60881573	A5SS	0.25	50	50	ENSMUST00000237783.2	ENSMUSG00000054008.10	Ndst1	chr18	protein_coding	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
chr18	60846704	60881383	-	60846704	60881573	A5SS	0.25	50	50	ENSMUST00000237783.2	ENSMUSG00000054008.10	Ndst1	chr18	protein_coding	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
chr18	60846704	60881383	-	60846704	60866080	5pMXE	0.25	50	50	ENSMUST00000237885.2	ENSMUSG00000054008.10	Ndst1	chr18	protein_coding	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
chr18	60880293;60907758	60907582;60909473	+	60880293	60909473	cassetteExon	0.5	100	100	ENSMUST00000236652.2	ENSMUSG00000024608.12	Rps14	chr18	protein_coding	ribosomal protein S14
chr18	60880293;60907853	60907582;60909473	+	60880293	60909473	cassetteExon	0.5	100	100	ENSMUST00000236652.2	ENSMUSG00000024608.12	Rps14	chr18	protein_coding	ribosomal protein S14
chr18	60908389	60909473	+	60880293	60909473	A5SS	0.2	50	50	ENSMUST00000236652.2	ENSMUSG00000024608.12	Rps14	chr18	protein_coding	ribosomal protein S14
chr18	60908814	60909473	+	60880293	60909473	A5SS	0.2	50	50	ENSMUST00000236652.2	ENSMUSG00000024608.12	Rps14	chr18	protein_coding	ribosomal protein S14
chr18	60880847	60907582	+	60880293	60907582	A5SS	0.5	50	50	ENSMUST00000235966.2	ENSMUSG00000024608.12	Rps14	chr18	protein_coding	ribosomal protein S14
chr18	60907853	60909473	+	60907758	60909473	A5SS	0.2	50	50	ENSMUST00000235966.2	ENSMUSG00000024608.12	Rps14	chr18	protein_coding	ribosomal protein S14
chr18	60908389	60909473	+	60907758	60909473	A5SS	0.2	50	50	ENSMUST00000235966.2	ENSMUSG00000024608.12	Rps14	chr18	protein_coding	ribosomal protein S14
chr18	60908814	60909473	+	60907758	60909473	A5SS	0.2	50	50	ENSMUST00000235966.2	ENSMUSG00000024608.12	Rps14	chr18	protein_coding	ribosomal protein S14
chr18	60880293	60909473	+	60907758	60909473	5pMXE	0.2	50	50	ENSMUST00000025511.11	ENSMUSG00000024608.12	Rps14	chr18	protein_coding	ribosomal protein S14
chr18	60880293	60909473	+	60907853	60909473	5pMXE	0.2	50	50	ENSMUST00000118551.8	ENSMUSG00000024608.12	Rps14	chr18	protein_coding	ribosomal protein S14
chr18	60908389	60909473	+	60907853	60909473	A5SS	0.2	50	50	ENSMUST00000118551.8	ENSMUSG00000024608.12	Rps14	chr18	protein_coding	ribosomal protein S14
chr18	60908814	60909473	+	60907853	60909473	A5SS	0.2	50	50	ENSMUST00000118551.8	ENSMUSG00000024608.12	Rps14	chr18	protein_coding	ribosomal protein S14
chr18	60908814	60909473	+	60908389	60909473	A5SS	0.2	50	50	ENSMUST00000127568.8	ENSMUSG00000024608.12	Rps14	chr18	protein_coding	ribosomal protein S14
chr18	60943490	60944931	+	60943490;60944557	60944366;60944931	ES	0.5	50	50	ENSMUST00000097563.9	ENSMUSG00000024610.16	Cd74	chr18	protein_coding	CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)
chr18	60956062	60961437	-	60956062;60960519	60960412;60961437	ES	0.5	50	50	ENSMUST00000175934.8	ENSMUSG00000024613.17	Tcof1	chr18	protein_coding	treacle ribosome biogenesis factor 1
chr18	60965067	60965499	-	60965067;60965381	60965238;60965499	ES	0.5	50	50	ENSMUST00000175934.8	ENSMUSG00000024613.17	Tcof1	chr18	protein_coding	treacle ribosome biogenesis factor 1
chr18	60952682	60954705	-	60952682	60954715	A5SS	0.5	50	50	ENSMUST00000175934.8	ENSMUSG00000024613.17	Tcof1	chr18	protein_coding	treacle ribosome biogenesis factor 1
chr18	60978938	60981380	-	60978938	60981823	A5SS	0.5	50	50	ENSMUST00000175934.8	ENSMUSG00000024613.17	Tcof1	chr18	protein_coding	treacle ribosome biogenesis factor 1
chr18	61097035;61102115	61102083;61103066	+	61097035	61103066	cassetteExon	0.5	100	100	ENSMUST00000102888.10	ENSMUSG00000024617.17	Camk2a	chr18	protein_coding	calcium/calmodulin-dependent protein kinase II alpha
chr18	61074453	61076181	+	61074453	61080058	A3SS	0.5	50	50	ENSMUST00000102888.10	ENSMUSG00000024617.17	Camk2a	chr18	protein_coding	calcium/calmodulin-dependent protein kinase II alpha
chr18	61060098	61074359	+	61058912	61074359	A5SS	0.5	50	50	ENSMUST00000102888.10	ENSMUSG00000024617.17	Camk2a	chr18	protein_coding	calcium/calmodulin-dependent protein kinase II alpha
chr18	61142677;61143254	61143177;61147049	-	61142677	61147049	cassetteExon	0.5	100	100	ENSMUST00000025520.10	ENSMUSG00000052026.9	Slc6a7	chr18	protein_coding	solute carrier family 6 (neurotransmitter transporter, L-proline), member 7
chr18	61178644;61179172	61179102;61193216	+	61178644	61193216	cassetteExon	0.5	100	100	ENSMUST00000025522.11	ENSMUSG00000024620.12	Pdgfrb	chr18	protein_coding	platelet derived growth factor receptor, beta polypeptide
chr18	61238756	61238853	+	61235596	61238853	A5SS	0.5	50	50	ENSMUST00000237873.2	ENSMUSG00000024621.17	Csf1r	chr18	protein_coding	colony stimulating factor 1 receptor
chr18	61238756	61238950	+	61238756	61238853	A3SS	0.5	50	50	ENSMUST00000025523.13	ENSMUSG00000024621.17	Csf1r	chr18	protein_coding	colony stimulating factor 1 receptor
chr18	61252139	61253620	+	61252139	61257271	A3SS	0.5	50	50	ENSMUST00000025523.13	ENSMUSG00000024621.17	Csf1r	chr18	protein_coding	colony stimulating factor 1 receptor
chr18	61267133	61269299	-	61267133;61268659	61268543;61269299	ES	0.5	50	50	ENSMUST00000091884.6	ENSMUSG00000024622.9	Hmgxb3	chr18	protein_coding	HMG box domain containing 3
chr18	61269432	61273863	-	61269432;61270694	61270475;61273863	ES	0.5	50	50	ENSMUST00000091884.6	ENSMUSG00000024622.9	Hmgxb3	chr18	protein_coding	HMG box domain containing 3
chr18	61265667;61266153	61266014;61266924	-	61265667	61266924	cassetteExon	0.5	100	100	ENSMUST00000091884.6	ENSMUSG00000024622.9	Hmgxb3	chr18	protein_coding	HMG box domain containing 3
chr18	61288504	61290647	-	61288504	61290415	A5SS&ES	0.5	50	50	ENSMUST00000091884.6	ENSMUSG00000024622.9	Hmgxb3	chr18	protein_coding	HMG box domain containing 3
chr18	61290833	61292230	-	61290833	61295969	A5SS	0.5	50	50	ENSMUST00000091884.6	ENSMUSG00000024622.9	Hmgxb3	chr18	protein_coding	HMG box domain containing 3
chr18	61298655	61300412	-	61298655	61300268	A5SS	0.5	50	50	ENSMUST00000091884.6	ENSMUSG00000024622.9	Hmgxb3	chr18	protein_coding	HMG box domain containing 3
chr18	61269432	61273863	-	61269432	61270475	5pMXE	0.5	50	50	ENSMUST00000237101.2	ENSMUSG00000024622.9	Hmgxb3	chr18	protein_coding	HMG box domain containing 3
chr18	61332730	61333077	-	61332730	61334753	A5SS	0.5	50	50	ENSMUST00000146409.8	ENSMUSG00000034320.15	Slc26a2	chr18	protein_coding	solute carrier family 26 (sulfate transporter), member 2
chr18	61337517	61344187	-	61337517	61344470	A5SS	0.5	50	50	ENSMUST00000146409.8	ENSMUSG00000034320.15	Slc26a2	chr18	protein_coding	solute carrier family 26 (sulfate transporter), member 2
chr18	61408193	61414592	+	61398136	61414592	A5SS	0.5	50	50	ENSMUST00000025468.15	ENSMUSG00000024575.17	Pde6a	chr18	protein_coding	phosphodiesterase 6A, cGMP-specific, rod, alpha
chr18	61456379;61515594	61515516;61533361	-	61456379	61533361	cassetteExon	0.5	100	100	ENSMUST00000075299.13	ENSMUSG00000033871.15	Ppargc1b	chr18	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator 1 beta
chr18	61523157	61533361	-	61456379	61533361	A3SS	0.33	50	50	ENSMUST00000075299.13	ENSMUSG00000033871.15	Ppargc1b	chr18	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator 1 beta
chr18	61523157	61533361	-	61515594	61533361	A3SS	0.33	50	50	ENSMUST00000063307.6	ENSMUSG00000033871.15	Ppargc1b	chr18	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator 1 beta
chr18	61657074	61669535	-	61657074	61669462	A5SS	0.5	50	50	ENSMUST00000171629.3	ENSMUSG00000045094.9	Arhgef37	chr18	protein_coding	Rho guanine nucleotide exchange factor (GEF) 37
chr18	61702633;61705028	61704945;61708481	+	61702633	61708481	cassetteExon	0.5	100	100	ENSMUST00000165123.8	ENSMUSG00000024576.15	Csnk1a1	chr18	protein_coding	casein kinase 1, alpha 1
chr18	61713522	61715107	+	61713522	61720497	A3SS	0.5	50	50	ENSMUST00000165123.8	ENSMUSG00000024576.15	Csnk1a1	chr18	protein_coding	casein kinase 1, alpha 1
chr18	61713558	61720497	+	61713522	61720497	A5SS	0.5	50	50	ENSMUST00000165123.8	ENSMUSG00000024576.15	Csnk1a1	chr18	protein_coding	casein kinase 1, alpha 1
chr18	61713558	61715107	+	61713558	61720497	A3SS	0.5	50	50	ENSMUST00000165721.8	ENSMUSG00000024576.15	Csnk1a1	chr18	protein_coding	casein kinase 1, alpha 1
chr18	61713558	61715107	+	61713522	61715107	A5SS	0.5	50	50	ENSMUST00000115246.9	ENSMUSG00000024576.15	Csnk1a1	chr18	protein_coding	casein kinase 1, alpha 1
chr18	61772839	61778234	+	61772803	61778234	A5SS	0.5	50	50	ENSMUST00000183083.8	ENSMUSG00000098098.8	Bvht	chr18	lncRNA	braveheart long non-coding RNA
chr18	61821075	61823189	+	61818180	61823189	A5SS	0.33	50	50	ENSMUST00000237575.2	ENSMUSG00000024578.4	Il17b	chr18	protein_coding	interleukin 17B
chr18	61821112	61823189	+	61818180	61823189	A5SS	0.33	50	50	ENSMUST00000237575.2	ENSMUSG00000024578.4	Il17b	chr18	protein_coding	interleukin 17B
chr18	61821075	61823189	+	61821112	61823189	A5SS	0.33	50	50	ENSMUST00000235713.2	ENSMUSG00000024578.4	Il17b	chr18	protein_coding	interleukin 17B
chr18	61835441;61836465	61836417;61836583	-	61835441	61836583	cassetteExon	0.5	100	100	ENSMUST00000025472.7	ENSMUSG00000024579.8	Pcyox1l	chr18	protein_coding	prenylcysteine oxidase 1 like
chr18	61851705	61851825	-	61849198	61851825	A3SS	0.5	50	50	ENSMUST00000062991.9	ENSMUSG00000024580.9	Grpel2	chr18	protein_coding	GrpE-like 2, mitochondrial
chr18	61851906	61852082	-	61851906	61852773	A5SS	0.5	50	50	ENSMUST00000062991.9	ENSMUSG00000024580.9	Grpel2	chr18	protein_coding	GrpE-like 2, mitochondrial
chr18	61867538	61868669	+	61860073	61868669	A5SS	0.5	50	50	ENSMUST00000184678.2	ENSMUSG00000098702.2	1500015A07Rik	chr18	lncRNA	RIKEN cDNA 1500015A07 gene
chr18	62146300	62156219	+	62146300	62147970	3pMXE	0.5	50	50	ENSMUST00000051720.6	ENSMUSG00000045629.9	Sh3tc2	chr18	protein_coding	SH3 domain and tetratricopeptide repeats 2
chr18	62124115	62124249	+	62124115	62124209	A3SS	0.5	50	50	ENSMUST00000051720.6	ENSMUSG00000045629.9	Sh3tc2	chr18	protein_coding	SH3 domain and tetratricopeptide repeats 2
chr18	62571022	62615980	+	62571022	62597505	3pMXE	0.25	50	50	ENSMUST00000027560.8	ENSMUSG00000026322.10	Htr4	chr18	protein_coding	5 hydroxytryptamine (serotonin) receptor 4
chr18	62571022	62629499	+	62571022	62597505	3pMXE	0.25	50	50	ENSMUST00000027560.8	ENSMUSG00000026322.10	Htr4	chr18	protein_coding	5 hydroxytryptamine (serotonin) receptor 4
chr18	62571022;62579978	62579921;62597505	+	62571022	62597505	cassetteExon	0.5	100	100	ENSMUST00000027560.8	ENSMUSG00000026322.10	Htr4	chr18	protein_coding	5 hydroxytryptamine (serotonin) receptor 4
chr18	62571022;62616018	62615980;62629499	+	62571022	62629499	cassetteExon	0.5	100	100	ENSMUST00000238081.2	ENSMUSG00000026322.10	Htr4	chr18	protein_coding	5 hydroxytryptamine (serotonin) receptor 4
chr18	62571022	62579921	+	62571022	62629499	A3SS	0.25	50	50	ENSMUST00000238081.2	ENSMUSG00000026322.10	Htr4	chr18	protein_coding	5 hydroxytryptamine (serotonin) receptor 4
chr18	62571022	62579921	+	62571022	62615980	A3SS	0.25	50	50	ENSMUST00000236691.2	ENSMUSG00000026322.10	Htr4	chr18	protein_coding	5 hydroxytryptamine (serotonin) receptor 4
chr18	62674117;62677997	62677890;62681683	-	62674117	62681683	cassetteExon	0.5	100	100	ENSMUST00000048688.8	ENSMUSG00000042211.8	Fbxo38	chr18	protein_coding	F-box protein 38
chr18	62648618	62650035	-	62648615	62650035	A3SS	0.5	50	50	ENSMUST00000048688.8	ENSMUSG00000042211.8	Fbxo38	chr18	protein_coding	F-box protein 38
chr18	62784850	62785267	+	62784850	62786488	A3SS	0.5	50	50	ENSMUST00000055725.12	ENSMUSG00000044176.13	Spink10	chr18	protein_coding	serine peptidase inhibitor, Kazal type 10
chr18	62791921	62792947	+	62791921	62792943	A3SS	0.5	50	50	ENSMUST00000055725.12	ENSMUSG00000044176.13	Spink10	chr18	protein_coding	serine peptidase inhibitor, Kazal type 10
chr18	62779413	62783342	+	62682155	62783342	A5SS	0.5	50	50	ENSMUST00000055725.12	ENSMUSG00000044176.13	Spink10	chr18	protein_coding	serine peptidase inhibitor, Kazal type 10
chr18	62783586	62783921	+	62783402	62783921	A5SS	0.33	50	50	ENSMUST00000055725.12	ENSMUSG00000044176.13	Spink10	chr18	protein_coding	serine peptidase inhibitor, Kazal type 10
chr18	62783620	62783921	+	62783402	62783921	A5SS	0.33	50	50	ENSMUST00000055725.12	ENSMUSG00000044176.13	Spink10	chr18	protein_coding	serine peptidase inhibitor, Kazal type 10
chr18	62790476	62790928	+	62786603	62790928	A5SS	0.5	50	50	ENSMUST00000055725.12	ENSMUSG00000044176.13	Spink10	chr18	protein_coding	serine peptidase inhibitor, Kazal type 10
chr18	62783620	62783921	+	62783586	62783921	A5SS	0.33	50	50	ENSMUST00000087562.11	ENSMUSG00000044176.13	Spink10	chr18	protein_coding	serine peptidase inhibitor, Kazal type 10
chr18	62710279	62711822	-	62710279	62712186	A5SS	0.5	50	50	ENSMUST00000236302.2	ENSMUSG00000110576.3	Gm36368	chr18	protein_coding	predicted gene, 36368
chr18	62727435	62729275	-	62727435;62728346	62728321;62729275	ES	0.5	50	50	ENSMUST00000076194.6	ENSMUSG00000060201.6	Spink7	chr18	protein_coding	serine peptidase inhibitor, Kazal type 7 (putative)
chr18	63055792	63066946	+	63055792	63082946	A3SS	0.5	50	50	ENSMUST00000237428.2	ENSMUSG00000071847.14	Apcdd1	chr18	protein_coding	adenomatosis polyposis coli down-regulated 1
chr18	63070508	63082946	+	63055792	63082946	A5SS	0.5	50	50	ENSMUST00000237428.2	ENSMUSG00000071847.14	Apcdd1	chr18	protein_coding	adenomatosis polyposis coli down-regulated 1
chr18	63111095	63115690	+	63111095;63113604	63113537;63115690	ES	0.5	50	50	ENSMUST00000025474.14	ENSMUSG00000024581.14	Napg	chr18	protein_coding	N-ethylmaleimide sensitive fusion protein attachment protein gamma
chr18	63119359	63120025	+	63119359;63119548	63119482;63120025	ES	0.5	50	50	ENSMUST00000025474.14	ENSMUSG00000024581.14	Napg	chr18	protein_coding	N-ethylmaleimide sensitive fusion protein attachment protein gamma
chr18	63124950;63125561	63125412;63127383	+	63124950	63127383	cassetteExon	0.5	100	100	ENSMUST00000025474.14	ENSMUSG00000024581.14	Napg	chr18	protein_coding	N-ethylmaleimide sensitive fusion protein attachment protein gamma
chr18	63115774	63116431	+	63115774	63116445	A3SS	0.5	50	50	ENSMUST00000025474.14	ENSMUSG00000024581.14	Napg	chr18	protein_coding	N-ethylmaleimide sensitive fusion protein attachment protein gamma
chr18	63111119	63113537	+	63111095	63113537	A5SS	0.5	50	50	ENSMUST00000025474.14	ENSMUSG00000024581.14	Napg	chr18	protein_coding	N-ethylmaleimide sensitive fusion protein attachment protein gamma
chr18	63117194	63119250	+	63117141	63119250	A5SS	0.25	50	50	ENSMUST00000025474.14	ENSMUSG00000024581.14	Napg	chr18	protein_coding	N-ethylmaleimide sensitive fusion protein attachment protein gamma
chr18	63119146	63119250	+	63117141	63119250	A5SS	0.25	50	50	ENSMUST00000025474.14	ENSMUSG00000024581.14	Napg	chr18	protein_coding	N-ethylmaleimide sensitive fusion protein attachment protein gamma
chr18	63121642	63124872	+	63120095	63124872	A5SS	0.5	50	50	ENSMUST00000025474.14	ENSMUSG00000024581.14	Napg	chr18	protein_coding	N-ethylmaleimide sensitive fusion protein attachment protein gamma
chr18	63119146	63119250	+	63117194	63119250	A5SS	0.25	50	50	ENSMUST00000237864.2	ENSMUSG00000024581.14	Napg	chr18	protein_coding	N-ethylmaleimide sensitive fusion protein attachment protein gamma
chr18	63111095	63115690	+	63111095	63113537	A3SS&ES	0.33	50	50	ENSMUST00000237157.2	ENSMUSG00000024581.14	Napg	chr18	protein_coding	N-ethylmaleimide sensitive fusion protein attachment protein gamma
chr18	63113604	63115690	+	63113604	63117111	A3SS	0.5	50	50	ENSMUST00000237157.2	ENSMUSG00000024581.14	Napg	chr18	protein_coding	N-ethylmaleimide sensitive fusion protein attachment protein gamma
chr18	63116462	63117111	+	63113604	63117111	A5SS	0.5	50	50	ENSMUST00000237157.2	ENSMUSG00000024581.14	Napg	chr18	protein_coding	N-ethylmaleimide sensitive fusion protein attachment protein gamma
chr18	63111095	63119250	+	63111095	63113537	3pMXE	0.33	50	50	ENSMUST00000126870.2	ENSMUSG00000024581.14	Napg	chr18	protein_coding	N-ethylmaleimide sensitive fusion protein attachment protein gamma
chr18	63111095;63113604	63113537;63117111	+	63111095;63116462	63115690;63117111	MXE	0.5	100	100	ENSMUST00000236925.2	ENSMUSG00000024581.14	Napg	chr18	protein_coding	N-ethylmaleimide sensitive fusion protein attachment protein gamma
chr18	63111095	63115690	+	63111095	63119250	A3SS	0.33	50	50	ENSMUST00000235372.2	ENSMUSG00000024581.14	Napg	chr18	protein_coding	N-ethylmaleimide sensitive fusion protein attachment protein gamma
chr18	63117141	63119250	+	63111095	63119250	A5SS	0.25	50	50	ENSMUST00000235372.2	ENSMUSG00000024581.14	Napg	chr18	protein_coding	N-ethylmaleimide sensitive fusion protein attachment protein gamma
chr18	63117194	63119250	+	63111095	63119250	A5SS	0.25	50	50	ENSMUST00000235372.2	ENSMUSG00000024581.14	Napg	chr18	protein_coding	N-ethylmaleimide sensitive fusion protein attachment protein gamma
chr18	63119146	63119250	+	63111095	63119250	A5SS	0.25	50	50	ENSMUST00000235372.2	ENSMUSG00000024581.14	Napg	chr18	protein_coding	N-ethylmaleimide sensitive fusion protein attachment protein gamma
chr18	63111095	63115690	+	63113604	63115690	A5SS&ES	0.5	50	50	ENSMUST00000237483.2	ENSMUSG00000024581.14	Napg	chr18	protein_coding	N-ethylmaleimide sensitive fusion protein attachment protein gamma
chr18	63153780	63155469	-	63153780;63154403	63154215;63155469	ES	0.5	50	50	ENSMUST00000047480.13	ENSMUSG00000041482.18	Piezo2	chr18	protein_coding	piezo-type mechanosensitive ion channel component 2
chr18	63175911	63183603	-	63175911;63178615	63178448;63183603	ES	0.5	50	50	ENSMUST00000047480.13	ENSMUSG00000041482.18	Piezo2	chr18	protein_coding	piezo-type mechanosensitive ion channel component 2
chr18	63226088	63235092	-	63226088;63232165	63232124;63235092	ES	0.5	50	50	ENSMUST00000047480.13	ENSMUSG00000041482.18	Piezo2	chr18	protein_coding	piezo-type mechanosensitive ion channel component 2
chr18	63250858	63254294	-	63250858;63252015	63251977;63254294	ES	0.5	50	50	ENSMUST00000047480.13	ENSMUSG00000041482.18	Piezo2	chr18	protein_coding	piezo-type mechanosensitive ion channel component 2
chr18	63226088;63226487	63226455;63232124	-	63226088	63232124	cassetteExon	0.5	100	100	ENSMUST00000047480.13	ENSMUSG00000041482.18	Piezo2	chr18	protein_coding	piezo-type mechanosensitive ion channel component 2
chr18	63213005	63214735	-	63211926	63214735	A3SS	0.5	50	50	ENSMUST00000047480.13	ENSMUSG00000041482.18	Piezo2	chr18	protein_coding	piezo-type mechanosensitive ion channel component 2
chr18	63241341	63242936	-	63241344	63242936	A3SS	0.33	50	50	ENSMUST00000047480.13	ENSMUSG00000041482.18	Piezo2	chr18	protein_coding	piezo-type mechanosensitive ion channel component 2
chr18	63242696	63242936	-	63241344	63242936	A3SS	0.33	50	50	ENSMUST00000047480.13	ENSMUSG00000041482.18	Piezo2	chr18	protein_coding	piezo-type mechanosensitive ion channel component 2
chr18	63150724	63152338	-	63150724	63152262	A5SS	0.5	50	50	ENSMUST00000047480.13	ENSMUSG00000041482.18	Piezo2	chr18	protein_coding	piezo-type mechanosensitive ion channel component 2
chr18	63242696	63242936	-	63241341	63242936	A3SS	0.33	50	50	ENSMUST00000238156.2	ENSMUSG00000041482.18	Piezo2	chr18	protein_coding	piezo-type mechanosensitive ion channel component 2
chr18	63226088	63226455	-	63226088	63235092	A5SS	0.33	50	50	ENSMUST00000238156.2	ENSMUSG00000041482.18	Piezo2	chr18	protein_coding	piezo-type mechanosensitive ion channel component 2
chr18	63153780	63155469	-	63153780	63154215	A5SS	0.5	50	50	ENSMUST00000123322.2	ENSMUSG00000041482.18	Piezo2	chr18	protein_coding	piezo-type mechanosensitive ion channel component 2
chr18	63250858	63257637	-	63250858;63254413	63254294;63257637	ES	0.5	50	50	ENSMUST00000182233.9	ENSMUSG00000041482.18	Piezo2	chr18	protein_coding	piezo-type mechanosensitive ion channel component 2
chr18	63250858	63251977	-	63250858	63257637	A5SS	0.33	50	50	ENSMUST00000046860.7	ENSMUSG00000041482.18	Piezo2	chr18	protein_coding	piezo-type mechanosensitive ion channel component 2
chr18	63538118;63551268	63551113;63554153	+	63538118	63554153	cassetteExon	0.5	100	100	ENSMUST00000183218.3	ENSMUSG00000097980.3	Gm26972	chr18	lncRNA	predicted gene, 26972
chr18	63538118	63545978	+	63538118	63554153	A3SS	0.33	50	50	ENSMUST00000183218.3	ENSMUSG00000097980.3	Gm26972	chr18	lncRNA	predicted gene, 26972
chr18	63538118	63545978	+	63538118	63551113	A3SS	0.33	50	50	ENSMUST00000235841.2	ENSMUSG00000097980.3	Gm26972	chr18	lncRNA	predicted gene, 26972
chr18	63538118	63554153	+	63551268	63554153	5pMXE	0.5	50	50	ENSMUST00000237281.2	ENSMUSG00000097980.3	Gm26972	chr18	lncRNA	predicted gene, 26972
chr18	63815378	63841515	-	63815378	63825147	5pMXE	0.33	50	50	ENSMUST00000237004.2	ENSMUSG00000024583.4	Txnl1	chr18	protein_coding	thioredoxin-like 1
chr18	63797403;63798765	63798723;63804653	-	63797403	63804653	cassetteExon	0.5	100	100	ENSMUST00000237004.2	ENSMUSG00000024583.4	Txnl1	chr18	protein_coding	thioredoxin-like 1
chr18	63799630	63804653	-	63797403	63804653	A3SS	0.33	50	50	ENSMUST00000237004.2	ENSMUSG00000024583.4	Txnl1	chr18	protein_coding	thioredoxin-like 1
chr18	63806937	63807120	-	63804757	63807120	A3SS	0.5	50	50	ENSMUST00000237004.2	ENSMUSG00000024583.4	Txnl1	chr18	protein_coding	thioredoxin-like 1
chr18	63797403	63798809	-	63797403	63804653	A5SS	0.33	50	50	ENSMUST00000237004.2	ENSMUSG00000024583.4	Txnl1	chr18	protein_coding	thioredoxin-like 1
chr18	63815378	63817628	-	63815378	63825147	A5SS	0.33	50	50	ENSMUST00000237004.2	ENSMUSG00000024583.4	Txnl1	chr18	protein_coding	thioredoxin-like 1
chr18	63799630	63804653	-	63798765	63804653	A3SS	0.33	50	50	ENSMUST00000025476.4	ENSMUSG00000024583.4	Txnl1	chr18	protein_coding	thioredoxin-like 1
chr18	63797403	63798809	-	63797403	63798723	A5SS&ES	0.33	50	50	ENSMUST00000025476.4	ENSMUSG00000024583.4	Txnl1	chr18	protein_coding	thioredoxin-like 1
chr18	63815378;63817733	63817628;63841515	-	63815378	63841515	cassetteExon	0.5	100	100	ENSMUST00000238061.2	ENSMUSG00000024583.4	Txnl1	chr18	protein_coding	thioredoxin-like 1
chr18	63841234	63841515	-	63815378	63841515	A3SS	0.33	50	50	ENSMUST00000238061.2	ENSMUSG00000024583.4	Txnl1	chr18	protein_coding	thioredoxin-like 1
chr18	63841234	63841515	-	63817733	63841515	A3SS	0.33	50	50	ENSMUST00000237331.2	ENSMUSG00000024583.4	Txnl1	chr18	protein_coding	thioredoxin-like 1
chr18	63913028	63927296	+	63913028;63924962	63924867;63927296	ES	0.5	50	50	ENSMUST00000072726.7	ENSMUSG00000040560.11	Wdr7	chr18	protein_coding	WD repeat domain 7
chr18	63873176	63888107	+	63873318	63888107	A5SS	0.5	50	50	ENSMUST00000072726.7	ENSMUSG00000040560.11	Wdr7	chr18	protein_coding	WD repeat domain 7
chr18	63913028	63924867	+	63913028	63958196	A3SS	0.33	50	50	ENSMUST00000235428.2	ENSMUSG00000040560.11	Wdr7	chr18	protein_coding	WD repeat domain 7
chr18	63913028	63927296	+	63913028	63958196	A3SS	0.33	50	50	ENSMUST00000235428.2	ENSMUSG00000040560.11	Wdr7	chr18	protein_coding	WD repeat domain 7
chr18	63929352	63958196	+	63913028	63958196	A5SS	0.5	50	50	ENSMUST00000235428.2	ENSMUSG00000040560.11	Wdr7	chr18	protein_coding	WD repeat domain 7
chr18	64303549	64410147	-	64303549;64383216	64383082;64410147	ES	0.2	50	50	ENSMUST00000127716.8	ENSMUSG00000086128.9	St8sia3os	chr18	lncRNA	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3, opposite strand
chr18	64383216	64466479	-	64383216	64410147	5pMXE	0.5	50	50	ENSMUST00000127716.8	ENSMUSG00000086128.9	St8sia3os	chr18	lncRNA	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3, opposite strand
chr18	64301045	64301817	-	64291311	64301817	A3SS	0.25	50	50	ENSMUST00000127716.8	ENSMUSG00000086128.9	St8sia3os	chr18	lncRNA	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3, opposite strand
chr18	64301141	64301817	-	64291311	64301817	A3SS	0.25	50	50	ENSMUST00000127716.8	ENSMUSG00000086128.9	St8sia3os	chr18	lncRNA	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3, opposite strand
chr18	64301236	64301817	-	64291311	64301817	A3SS	0.25	50	50	ENSMUST00000127716.8	ENSMUSG00000086128.9	St8sia3os	chr18	lncRNA	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3, opposite strand
chr18	64333957	64383082	-	64303549	64383082	A3SS	0.5	50	50	ENSMUST00000127716.8	ENSMUSG00000086128.9	St8sia3os	chr18	lncRNA	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3, opposite strand
chr18	64403026	64410147	-	64383216	64410147	A3SS	0.2	50	50	ENSMUST00000127716.8	ENSMUSG00000086128.9	St8sia3os	chr18	lncRNA	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3, opposite strand
chr18	64408440	64410147	-	64383216	64410147	A3SS	0.2	50	50	ENSMUST00000127716.8	ENSMUSG00000086128.9	St8sia3os	chr18	lncRNA	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3, opposite strand
chr18	64409404	64410147	-	64383216	64410147	A3SS	0.2	50	50	ENSMUST00000127716.8	ENSMUSG00000086128.9	St8sia3os	chr18	lncRNA	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3, opposite strand
chr18	64301045	64301817	-	64301141	64301817	A3SS	0.25	50	50	ENSMUST00000236604.2	ENSMUSG00000086128.9	St8sia3os	chr18	lncRNA	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3, opposite strand
chr18	64301236	64301817	-	64301141	64301817	A3SS	0.25	50	50	ENSMUST00000236604.2	ENSMUSG00000086128.9	St8sia3os	chr18	lncRNA	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3, opposite strand
chr18	64301236	64301817	-	64301045	64301817	A3SS	0.25	50	50	ENSMUST00000235267.2	ENSMUSG00000086128.9	St8sia3os	chr18	lncRNA	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3, opposite strand
chr18	64403026	64410147	-	64303549	64410147	A3SS	0.2	50	50	ENSMUST00000237973.2	ENSMUSG00000086128.9	St8sia3os	chr18	lncRNA	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3, opposite strand
chr18	64408440	64410147	-	64303549	64410147	A3SS	0.2	50	50	ENSMUST00000237973.2	ENSMUSG00000086128.9	St8sia3os	chr18	lncRNA	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3, opposite strand
chr18	64409404	64410147	-	64303549	64410147	A3SS	0.2	50	50	ENSMUST00000237973.2	ENSMUSG00000086128.9	St8sia3os	chr18	lncRNA	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3, opposite strand
chr18	64333957	64408371	-	64333957	64383082	A5SS&ES	0.5	50	50	ENSMUST00000235475.2	ENSMUSG00000086128.9	St8sia3os	chr18	lncRNA	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3, opposite strand
chr18	64333957;64383216	64383082;64410147	-	64333957;64408440	64408371;64410147	MXE	0.5	100	100	ENSMUST00000140903.2	ENSMUSG00000086128.9	St8sia3os	chr18	lncRNA	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3, opposite strand
chr18	64403026	64410147	-	64408440	64410147	A3SS&ES	0.25	50	50	ENSMUST00000140903.2	ENSMUSG00000086128.9	St8sia3os	chr18	lncRNA	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3, opposite strand
chr18	64409404	64410147	-	64408440	64410147	A3SS	0.25	50	50	ENSMUST00000140903.2	ENSMUSG00000086128.9	St8sia3os	chr18	lncRNA	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3, opposite strand
chr18	64409404	64410147	-	64403026	64410147	A3SS	0.2	50	50	ENSMUST00000123473.2	ENSMUSG00000086128.9	St8sia3os	chr18	lncRNA	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3, opposite strand
chr18	64397858	64398164	+	64389877	64398164	A5SS	0.5	50	50	ENSMUST00000025477.15	ENSMUSG00000056812.15	St8sia3	chr18	protein_coding	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
chr18	64399171	64400018	+	64398721	64400018	A5SS	0.25	50	50	ENSMUST00000025477.15	ENSMUSG00000056812.15	St8sia3	chr18	protein_coding	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
chr18	64399386	64400018	+	64398721	64400018	A5SS	0.25	50	50	ENSMUST00000025477.15	ENSMUSG00000056812.15	St8sia3	chr18	protein_coding	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
chr18	64399582	64400018	+	64398721	64400018	A5SS	0.25	50	50	ENSMUST00000025477.15	ENSMUSG00000056812.15	St8sia3	chr18	protein_coding	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
chr18	64399386	64400018	+	64399171	64400018	A5SS	0.25	50	50	ENSMUST00000139622.3	ENSMUSG00000056812.15	St8sia3	chr18	protein_coding	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
chr18	64399582	64400018	+	64399171	64400018	A5SS	0.25	50	50	ENSMUST00000139622.3	ENSMUSG00000056812.15	St8sia3	chr18	protein_coding	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
chr18	64399582	64400018	+	64399386	64400018	A5SS	0.25	50	50	ENSMUST00000134064.2	ENSMUSG00000056812.15	St8sia3	chr18	protein_coding	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
chr18	64597255	64603753	-	64597255;64600905	64600799;64603753	ES	0.5	50	50	ENSMUST00000235766.3	ENSMUSG00000024588.11	Fech	chr18	protein_coding	ferrochelatase
chr18	64611841	64621972	-	64611841;64616528	64616405;64621972	ES	0.5	50	50	ENSMUST00000235766.3	ENSMUSG00000024588.11	Fech	chr18	protein_coding	ferrochelatase
chr18	64616528	64622362	-	64616528	64621972	5pMXE	0.25	50	50	ENSMUST00000235766.3	ENSMUSG00000024588.11	Fech	chr18	protein_coding	ferrochelatase
chr18	64616528	64623133	-	64616528	64621972	5pMXE	0.25	50	50	ENSMUST00000235766.3	ENSMUSG00000024588.11	Fech	chr18	protein_coding	ferrochelatase
chr18	64594756	64595178	-	64594662	64595178	A3SS	0.5	50	50	ENSMUST00000235766.3	ENSMUSG00000024588.11	Fech	chr18	protein_coding	ferrochelatase
chr18	64608339	64611722	-	64608276	64611722	A3SS	0.33	50	50	ENSMUST00000235766.3	ENSMUSG00000024588.11	Fech	chr18	protein_coding	ferrochelatase
chr18	64608371	64611722	-	64608276	64611722	A3SS	0.33	50	50	ENSMUST00000235766.3	ENSMUSG00000024588.11	Fech	chr18	protein_coding	ferrochelatase
chr18	64611841	64612216	-	64611841	64616405	A5SS	0.33	50	50	ENSMUST00000235766.3	ENSMUSG00000024588.11	Fech	chr18	protein_coding	ferrochelatase
chr18	64616528	64621821	-	64616528	64621972	A5SS	0.25	50	50	ENSMUST00000235766.3	ENSMUSG00000024588.11	Fech	chr18	protein_coding	ferrochelatase
chr18	64611841	64621972	-	64611841	64612216	5pMXE	0.33	50	50	ENSMUST00000237717.2	ENSMUSG00000024588.11	Fech	chr18	protein_coding	ferrochelatase
chr18	64608339	64611722	-	64608371	64611722	A3SS	0.33	50	50	ENSMUST00000235215.2	ENSMUSG00000024588.11	Fech	chr18	protein_coding	ferrochelatase
chr18	64611841	64621972	-	64611841	64616405	A5SS&ES	0.33	50	50	ENSMUST00000237358.2	ENSMUSG00000024588.11	Fech	chr18	protein_coding	ferrochelatase
chr18	64616528	64621821	-	64616528	64623133	A5SS	0.25	50	50	ENSMUST00000237358.2	ENSMUSG00000024588.11	Fech	chr18	protein_coding	ferrochelatase
chr18	64616528	64622362	-	64616528	64623133	A5SS	0.25	50	50	ENSMUST00000237358.2	ENSMUSG00000024588.11	Fech	chr18	protein_coding	ferrochelatase
chr18	64597255	64603753	-	64600905	64603753	3pMXE	0.5	50	50	ENSMUST00000237891.2	ENSMUSG00000024588.11	Fech	chr18	protein_coding	ferrochelatase
chr18	64616528	64621821	-	64616528	64622362	A5SS	0.25	50	50	ENSMUST00000237891.2	ENSMUSG00000024588.11	Fech	chr18	protein_coding	ferrochelatase
chr18	64611841	64621972	-	64616528	64621972	3pMXE	0.5	50	50	ENSMUST00000235843.2	ENSMUSG00000024588.11	Fech	chr18	protein_coding	ferrochelatase
chr18	64640929	64643524	-	64640929;64642386	64642316;64643524	ES	0.5	50	50	ENSMUST00000237400.2	ENSMUSG00000024587.11	Nars	chr18	protein_coding	asparaginyl-tRNA synthetase
chr18	64642386	64644682	-	64642386;64643602	64643524;64644682	ES	0.5	50	50	ENSMUST00000237400.2	ENSMUSG00000024587.11	Nars	chr18	protein_coding	asparaginyl-tRNA synthetase
chr18	64643602	64644856	-	64643602;64644771	64644682;64644856	ES	0.5	50	50	ENSMUST00000237400.2	ENSMUSG00000024587.11	Nars	chr18	protein_coding	asparaginyl-tRNA synthetase
chr18	64644948	64648397	-	64644948;64645120	64645055;64648397	ES	0.33	50	50	ENSMUST00000237400.2	ENSMUSG00000024587.11	Nars	chr18	protein_coding	asparaginyl-tRNA synthetase
chr18	64645120	64649487	-	64645120;64648479	64648397;64649487	ES	0.33	50	50	ENSMUST00000237400.2	ENSMUSG00000024587.11	Nars	chr18	protein_coding	asparaginyl-tRNA synthetase
chr18	64645120;64647935	64647886;64648397	-	64645120	64648397	cassetteExon	0.5	100	100	ENSMUST00000237400.2	ENSMUSG00000024587.11	Nars	chr18	protein_coding	asparaginyl-tRNA synthetase
chr18	64634155	64634374	-	64633720	64634374	A3SS	0.5	50	50	ENSMUST00000237400.2	ENSMUSG00000024587.11	Nars	chr18	protein_coding	asparaginyl-tRNA synthetase
chr18	64644969	64645055	-	64644948	64645055	A3SS	0.5	50	50	ENSMUST00000237400.2	ENSMUSG00000024587.11	Nars	chr18	protein_coding	asparaginyl-tRNA synthetase
chr18	64648476	64649487	-	64648479	64649487	A3SS	0.33	50	50	ENSMUST00000237400.2	ENSMUSG00000024587.11	Nars	chr18	protein_coding	asparaginyl-tRNA synthetase
chr18	64648479	64649558	-	64648479	64649487	A5SS	0.5	50	50	ENSMUST00000237400.2	ENSMUSG00000024587.11	Nars	chr18	protein_coding	asparaginyl-tRNA synthetase
chr18	64645120	64649487	-	64645120;64648476	64648397;64649487	ES	0.33	50	50	ENSMUST00000236873.2	ENSMUSG00000024587.11	Nars	chr18	protein_coding	asparaginyl-tRNA synthetase
chr18	64640929;64643602	64643524;64644682	-	64640929;64642386	64642316;64644682	MXE	0.5	100	100	ENSMUST00000236873.2	ENSMUSG00000024587.11	Nars	chr18	protein_coding	asparaginyl-tRNA synthetase
chr18	64640929;64643602	64643524;64644856	-	64640929;64644771	64642316;64644856	MXE	0.5	100	100	ENSMUST00000236873.2	ENSMUSG00000024587.11	Nars	chr18	protein_coding	asparaginyl-tRNA synthetase
chr18	64642386;64643602	64643524;64644856	-	64642386;64644771	64644682;64644856	MXE	0.5	100	100	ENSMUST00000236873.2	ENSMUSG00000024587.11	Nars	chr18	protein_coding	asparaginyl-tRNA synthetase
chr18	64644948	64648397	-	64645120	64648397	A3SS&ES	0.33	50	50	ENSMUST00000237369.2	ENSMUSG00000024587.11	Nars	chr18	protein_coding	asparaginyl-tRNA synthetase
chr18	64644948;64645120	64645055;64649487	-	64644948;64648479	64648397;64649487	MXE	0.5	100	100	ENSMUST00000237351.2	ENSMUSG00000024587.11	Nars	chr18	protein_coding	asparaginyl-tRNA synthetase
chr18	64647935	64648397	-	64644948	64648397	A3SS	0.33	50	50	ENSMUST00000237351.2	ENSMUSG00000024587.11	Nars	chr18	protein_coding	asparaginyl-tRNA synthetase
chr18	64644948;64648476	64648397;64649487	-	64644948;64645120	64645055;64649487	MXE	0.5	100	100	ENSMUST00000236583.2	ENSMUSG00000024587.11	Nars	chr18	protein_coding	asparaginyl-tRNA synthetase
chr18	64645120	64647886	-	64645120	64649487	A5SS	0.33	50	50	ENSMUST00000236583.2	ENSMUSG00000024587.11	Nars	chr18	protein_coding	asparaginyl-tRNA synthetase
chr18	64645120	64649487	-	64645120	64648397	A5SS&ES	0.33	50	50	ENSMUST00000235325.2	ENSMUSG00000024587.11	Nars	chr18	protein_coding	asparaginyl-tRNA synthetase
chr18	64685022	64688185	-	64685022;64686249	64686085;64688185	ES	0.5	50	50	ENSMUST00000025482.10	ENSMUSG00000039529.10	Atp8b1	chr18	protein_coding	ATPase, class I, type 8B, member 1
chr18	64712277	64738269	-	64712277;64715069	64714972;64738269	ES	0.5	50	50	ENSMUST00000025482.10	ENSMUSG00000039529.10	Atp8b1	chr18	protein_coding	ATPase, class I, type 8B, member 1
chr18	65298717	65305346	+	65298717;65300644	65300585;65305346	ES	0.5	50	50	ENSMUST00000235343.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65130492;65157060	65156912;65207795	+	65130492	65207795	cassetteExon	0.5	100	100	ENSMUST00000235343.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65314453;65314607	65314554;65319397	+	65314453	65319397	cassetteExon	0.5	100	100	ENSMUST00000235343.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65021166	65021441	+	65021166	65130419	A3SS	0.5	50	50	ENSMUST00000235343.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65213142	65239510	+	65213142	65276867	A3SS	0.5	50	50	ENSMUST00000235343.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65276917	65288331	+	65276917	65288327	A3SS	0.5	50	50	ENSMUST00000235343.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65022083	65130419	+	65021166	65130419	A5SS	0.12	50	50	ENSMUST00000235343.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65022121	65130419	+	65021166	65130419	A5SS	0.12	50	50	ENSMUST00000235343.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65022142	65130419	+	65021166	65130419	A5SS	0.12	50	50	ENSMUST00000235343.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65022180	65130419	+	65021166	65130419	A5SS	0.12	50	50	ENSMUST00000235343.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65023841	65130419	+	65021166	65130419	A5SS	0.12	50	50	ENSMUST00000235343.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65054338	65130419	+	65021166	65130419	A5SS	0.12	50	50	ENSMUST00000235343.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65110054	65130419	+	65021166	65130419	A5SS	0.12	50	50	ENSMUST00000235343.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65159155	65207795	+	65130492	65207795	A5SS	0.25	50	50	ENSMUST00000235343.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65184243	65207795	+	65130492	65207795	A5SS	0.25	50	50	ENSMUST00000235343.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65209379	65210769	+	65207876	65210769	A5SS	0.33	50	50	ENSMUST00000235343.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65210526	65210769	+	65207876	65210769	A5SS	0.33	50	50	ENSMUST00000235343.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65217865	65276867	+	65213142	65276867	A5SS	0.5	50	50	ENSMUST00000235343.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65314197	65314399	+	65312067	65314399	A5SS	0.5	50	50	ENSMUST00000235343.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65341020	65341120	+	65338764	65341120	A5SS	0.5	50	50	ENSMUST00000235343.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65298717	65307116	+	65298717;65306106	65305987;65307116	ES	0.5	50	50	ENSMUST00000236209.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65298717;65305477	65305346;65305987	+	65298717	65305987	cassetteExon	0.5	100	100	ENSMUST00000236209.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65298717	65300585	+	65298717	65305987	A3SS	0.2	50	50	ENSMUST00000236209.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65130492	65207795	+	65130492	65156912	3pMXE	0.5	50	50	ENSMUST00000225057.3	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65298717	65311990	+	65298717;65307313	65307116;65311990	ES	0.5	50	50	ENSMUST00000235743.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65298717	65300585	+	65298717	65307116	A3SS	0.2	50	50	ENSMUST00000235743.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65298717	65305346	+	65298717	65307116	A3SS	0.2	50	50	ENSMUST00000235743.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65022121	65130419	+	65022083	65130419	A5SS	0.12	50	50	ENSMUST00000225261.3	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65022142	65130419	+	65022083	65130419	A5SS	0.12	50	50	ENSMUST00000225261.3	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65022180	65130419	+	65022083	65130419	A5SS	0.12	50	50	ENSMUST00000225261.3	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65023841	65130419	+	65022083	65130419	A5SS	0.12	50	50	ENSMUST00000225261.3	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65054338	65130419	+	65022083	65130419	A5SS	0.12	50	50	ENSMUST00000225261.3	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65110054	65130419	+	65022083	65130419	A5SS	0.12	50	50	ENSMUST00000225261.3	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65022121	65130419	+	65022180	65130419	A5SS	0.12	50	50	ENSMUST00000236929.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65022142	65130419	+	65022180	65130419	A5SS	0.12	50	50	ENSMUST00000236929.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65023841	65130419	+	65022180	65130419	A5SS	0.12	50	50	ENSMUST00000236929.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65054338	65130419	+	65022180	65130419	A5SS	0.12	50	50	ENSMUST00000236929.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65110054	65130419	+	65022180	65130419	A5SS	0.12	50	50	ENSMUST00000236929.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65022121	65130419	+	65022142	65130419	A5SS	0.12	50	50	ENSMUST00000224385.3	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65023841	65130419	+	65022142	65130419	A5SS	0.12	50	50	ENSMUST00000224385.3	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65054338	65130419	+	65022142	65130419	A5SS	0.12	50	50	ENSMUST00000224385.3	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65110054	65130419	+	65022142	65130419	A5SS	0.12	50	50	ENSMUST00000224385.3	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65023841	65130419	+	65022121	65130419	A5SS	0.12	50	50	ENSMUST00000163516.9	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65054338	65130419	+	65022121	65130419	A5SS	0.12	50	50	ENSMUST00000163516.9	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65110054	65130419	+	65022121	65130419	A5SS	0.12	50	50	ENSMUST00000163516.9	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65054338	65130419	+	65023841	65130419	A5SS	0.12	50	50	ENSMUST00000237384.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65110054	65130419	+	65023841	65130419	A5SS	0.12	50	50	ENSMUST00000237384.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65110054	65130419	+	65054338	65130419	A5SS	0.12	50	50	ENSMUST00000236898.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65130492	65207795	+	65157060	65207795	5pMXE	0.25	50	50	ENSMUST00000080418.7	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65159155	65207795	+	65157060	65207795	A5SS	0.25	50	50	ENSMUST00000080418.7	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65184243	65207795	+	65157060	65207795	A5SS	0.25	50	50	ENSMUST00000080418.7	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65184243	65207795	+	65159155	65207795	A5SS	0.25	50	50	ENSMUST00000226058.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65210526	65210769	+	65209379	65210769	A5SS	0.33	50	50	ENSMUST00000236764.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65298717	65300585	+	65298717	65311990	A3SS	0.2	50	50	ENSMUST00000235577.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65298717	65305346	+	65298717	65311990	A3SS	0.2	50	50	ENSMUST00000235577.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65298717	65305987	+	65298717	65311990	A3SS	0.2	50	50	ENSMUST00000235577.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65298717	65311990	+	65307313	65311990	5pMXE	0.5	50	50	ENSMUST00000237644.2	ENSMUSG00000024589.19	Nedd4l	chr18	protein_coding	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr18	65377444;65378347	65377893;65378430	+	65377444	65378430	cassetteExon	0.5	100	100	ENSMUST00000235304.2	ENSMUSG00000118017.2	Gm29966	chr18	lncRNA	predicted gene, 29966
chr18	65414166	65422749	-	65399361	65422749	A3SS	0.5	50	50	ENSMUST00000235298.2	ENSMUSG00000032845.17	Alpk2	chr18	protein_coding	alpha-kinase 2
chr18	65399361	65409717	-	65399361	65422749	A5SS	0.5	50	50	ENSMUST00000235298.2	ENSMUSG00000032845.17	Alpk2	chr18	protein_coding	alpha-kinase 2
chr18	65408059	65409717	-	65399361	65409717	A3SS	0.5	50	50	ENSMUST00000035548.16	ENSMUSG00000032845.17	Alpk2	chr18	protein_coding	alpha-kinase 2
chr18	65496405	65505792	-	65483779	65505792	A3SS	0.5	50	50	ENSMUST00000035548.16	ENSMUSG00000032845.17	Alpk2	chr18	protein_coding	alpha-kinase 2
chr18	65483196	65483640	+	65482331	65483640	A5SS	0.5	50	50	ENSMUST00000236639.2	ENSMUSG00000118163.2	Gm41757	chr18	lncRNA	predicted gene, 41757
chr18	65582089	65584618	+	65582089;65582678	65582646;65584618	ES	0.5	50	50	ENSMUST00000224056.3	ENSMUSG00000032688.10	Malt1	chr18	protein_coding	MALT1 paracaspase
chr18	65586775;65589906	65589828;65591240	+	65586775	65591240	cassetteExon	0.5	100	100	ENSMUST00000224056.3	ENSMUSG00000032688.10	Malt1	chr18	protein_coding	MALT1 paracaspase
chr18	65591443;65592809	65592746;65595807	+	65591443	65595807	cassetteExon	0.5	100	100	ENSMUST00000224056.3	ENSMUSG00000032688.10	Malt1	chr18	protein_coding	MALT1 paracaspase
chr18	65580783	65581254	+	65580783	65581250	A3SS	0.5	50	50	ENSMUST00000224056.3	ENSMUSG00000032688.10	Malt1	chr18	protein_coding	MALT1 paracaspase
chr18	65591443	65595807	+	65591443	65592746	3pMXE	0.5	50	50	ENSMUST00000224265.2	ENSMUSG00000032688.10	Malt1	chr18	protein_coding	MALT1 paracaspase
chr18	65713581	65715968	+	65713581;65715880	65715798;65715968	ES	0.1	50	50	ENSMUST00000235822.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715880	65756055	+	65715880;65716077	65715968;65756055	ES	0.12	50	50	ENSMUST00000235822.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65758405	65777264	+	65758405;65772002	65771821;65777264	ES	0.5	50	50	ENSMUST00000235822.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65716077;65732829	65732791;65756055	+	65716077	65756055	cassetteExon	0.5	100	100	ENSMUST00000235822.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65716077;65738441	65738403;65756055	+	65716077	65756055	cassetteExon	0.5	100	100	ENSMUST00000235822.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65713616	65715968	+	65715880	65715968	A5SS&ES	0.1	50	50	ENSMUST00000235822.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65714156	65715798	+	65713581	65715798	A5SS	0.25	50	50	ENSMUST00000235822.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65714156	65715968	+	65715880	65715968	A5SS&ES	0.1	50	50	ENSMUST00000235822.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65714219	65715968	+	65715880	65715968	A5SS&ES	0.1	50	50	ENSMUST00000235822.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65714662	65715798	+	65713581	65715798	A5SS	0.25	50	50	ENSMUST00000235822.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65714662	65715968	+	65715880	65715968	A5SS&ES	0.1	50	50	ENSMUST00000235822.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65714969	65715968	+	65715880	65715968	A5SS&ES	0.1	50	50	ENSMUST00000235822.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715433	65715968	+	65715880	65715968	A5SS&ES	0.1	50	50	ENSMUST00000235822.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715469	65715798	+	65713581	65715798	A5SS	0.25	50	50	ENSMUST00000235822.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715469	65715968	+	65715880	65715968	A5SS&ES	0.1	50	50	ENSMUST00000235822.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715469	65756055	+	65716077	65756055	A5SS&ES	0.12	50	50	ENSMUST00000235822.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715728	65715968	+	65715880	65715968	A5SS&ES	0.1	50	50	ENSMUST00000235822.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65716578	65756055	+	65716077	65756055	A5SS	0.12	50	50	ENSMUST00000235822.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65717119	65756055	+	65716077	65756055	A5SS	0.12	50	50	ENSMUST00000235822.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65780074	65784631	+	65777440	65784631	A5SS	0.5	50	50	ENSMUST00000235822.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65713581	65756055	+	65713581;65716077	65715968;65756055	ES	0.12	50	50	ENSMUST00000049016.12	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65713581;65715880	65715798;65756055	+	65713581;65716077	65715968;65756055	MXE	0.5	100	100	ENSMUST00000049016.12	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65758405;65777440	65777264;65815966	+	65758405	65815966	cassetteExon	0.5	100	100	ENSMUST00000049016.12	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65758405	65771821	+	65758405	65815966	A3SS	0.33	50	50	ENSMUST00000049016.12	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65713616	65715968	+	65713581	65715968	A5SS	0.1	50	50	ENSMUST00000049016.12	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65714156	65715968	+	65713581	65715968	A5SS	0.1	50	50	ENSMUST00000049016.12	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65714219	65715968	+	65713581	65715968	A5SS	0.1	50	50	ENSMUST00000049016.12	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65714662	65715968	+	65713581	65715968	A5SS	0.1	50	50	ENSMUST00000049016.12	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65714969	65715968	+	65713581	65715968	A5SS	0.1	50	50	ENSMUST00000049016.12	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715433	65715968	+	65713581	65715968	A5SS	0.1	50	50	ENSMUST00000049016.12	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715469	65715968	+	65713581	65715968	A5SS	0.1	50	50	ENSMUST00000049016.12	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715728	65715968	+	65713581	65715968	A5SS	0.1	50	50	ENSMUST00000049016.12	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65789703	65815966	+	65758405	65815966	A5SS	0.33	50	50	ENSMUST00000049016.12	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65714156	65715968	+	65713616	65715968	A5SS	0.1	50	50	ENSMUST00000236694.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65714219	65715968	+	65713616	65715968	A5SS	0.1	50	50	ENSMUST00000236694.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65714662	65715968	+	65713616	65715968	A5SS	0.1	50	50	ENSMUST00000236694.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65714969	65715968	+	65713616	65715968	A5SS	0.1	50	50	ENSMUST00000236694.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715433	65715968	+	65713616	65715968	A5SS	0.1	50	50	ENSMUST00000236694.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715469	65715968	+	65713616	65715968	A5SS	0.1	50	50	ENSMUST00000236694.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715728	65715968	+	65713616	65715968	A5SS	0.1	50	50	ENSMUST00000236694.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65713581;65715880	65715798;65756055	+	65713581	65756055	cassetteExon	0.5	100	100	ENSMUST00000183236.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65713581;65716077	65715798;65756055	+	65713581	65756055	cassetteExon	0.5	100	100	ENSMUST00000183236.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715469	65756055	+	65713581	65756055	A5SS	0.12	50	50	ENSMUST00000183236.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65716578	65756055	+	65713581	65756055	A5SS	0.12	50	50	ENSMUST00000183236.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65717119	65756055	+	65713581	65756055	A5SS	0.12	50	50	ENSMUST00000183236.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65732829	65756055	+	65713581	65756055	A5SS	0.12	50	50	ENSMUST00000183236.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65738441	65756055	+	65713581	65756055	A5SS	0.12	50	50	ENSMUST00000183236.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65714156;65715880	65715798;65715968	+	65714156	65715968	cassetteExon	0.5	100	100	ENSMUST00000182852.3	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65714156;65715880	65715798;65756055	+	65714156;65716077	65715968;65756055	MXE	0.5	100	100	ENSMUST00000182852.3	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65714219	65715968	+	65714156	65715968	A5SS	0.1	50	50	ENSMUST00000182852.3	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65714662	65715968	+	65714156	65715968	A5SS	0.1	50	50	ENSMUST00000182852.3	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65714969	65715968	+	65714156	65715968	A5SS	0.1	50	50	ENSMUST00000182852.3	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715433	65715968	+	65714156	65715968	A5SS	0.1	50	50	ENSMUST00000182852.3	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715469	65715968	+	65714156	65715968	A5SS	0.1	50	50	ENSMUST00000182852.3	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715728	65715968	+	65714156	65715968	A5SS	0.1	50	50	ENSMUST00000182852.3	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65714662	65715798	+	65714156	65715798	A5SS	0.25	50	50	ENSMUST00000236633.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715469	65715798	+	65714156	65715798	A5SS	0.25	50	50	ENSMUST00000236633.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65714662	65715968	+	65714219	65715968	A5SS	0.1	50	50	ENSMUST00000182319.9	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65714969	65715968	+	65714219	65715968	A5SS	0.1	50	50	ENSMUST00000182319.9	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715433	65715968	+	65714219	65715968	A5SS	0.1	50	50	ENSMUST00000182319.9	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715469	65715968	+	65714219	65715968	A5SS	0.1	50	50	ENSMUST00000182319.9	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715728	65715968	+	65714219	65715968	A5SS	0.1	50	50	ENSMUST00000182319.9	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715880	65756055	+	65716077	65756055	A5SS&ES	0.14	50	50	ENSMUST00000182319.9	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65716077;65732829	65732791;65756055	+	65716077;65738441	65738403;65756055	MXE	0.5	100	100	ENSMUST00000182140.8	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715469	65756055	+	65738441	65756055	A5SS&ES	0.14	50	50	ENSMUST00000182140.8	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715880	65756055	+	65738441	65756055	A5SS&ES	0.14	50	50	ENSMUST00000182140.8	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65716578	65756055	+	65738441	65756055	A5SS&ES	0.14	50	50	ENSMUST00000182140.8	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65717119	65756055	+	65738441	65756055	A5SS&ES	0.14	50	50	ENSMUST00000182140.8	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65714662	65715968	+	65714662;65715880	65715798;65715968	ES	0.16	50	50	ENSMUST00000237714.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715469	65715798	+	65714662	65715798	A5SS	0.25	50	50	ENSMUST00000237714.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65714662;65715880	65715798;65756055	+	65714662;65716077	65715968;65756055	MXE	0.5	100	100	ENSMUST00000237931.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65714969	65715968	+	65714662	65715968	A5SS	0.1	50	50	ENSMUST00000237931.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715433	65715968	+	65714662	65715968	A5SS	0.1	50	50	ENSMUST00000237931.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715469	65715968	+	65714662	65715968	A5SS	0.1	50	50	ENSMUST00000237931.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715728	65715968	+	65714662	65715968	A5SS	0.1	50	50	ENSMUST00000237931.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715433	65715968	+	65714969	65715968	A5SS	0.1	50	50	ENSMUST00000182979.8	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715469	65715968	+	65714969	65715968	A5SS	0.1	50	50	ENSMUST00000182979.8	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715728	65715968	+	65714969	65715968	A5SS	0.1	50	50	ENSMUST00000182979.8	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65713581	65715968	+	65715880	65715968	5pMXE	0.1	50	50	ENSMUST00000237553.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715469	65756055	+	65715469;65716077	65715968;65756055	ES	0.14	50	50	ENSMUST00000237712.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715469;65715880	65715798;65715968	+	65715469	65715968	cassetteExon	0.5	100	100	ENSMUST00000237712.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715469;65715880	65715798;65756055	+	65715469;65716077	65715968;65756055	MXE	0.5	100	100	ENSMUST00000237712.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715433	65715968	+	65715469	65715968	A5SS	0.1	50	50	ENSMUST00000237712.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715728	65715968	+	65715469	65715968	A5SS	0.1	50	50	ENSMUST00000237712.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715728	65715968	+	65715433	65715968	A5SS	0.1	50	50	ENSMUST00000182684.8	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715469	65756055	+	65715469;65715880	65715798;65756055	ES	0.14	50	50	ENSMUST00000235669.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65716578	65756055	+	65715880	65756055	A5SS	0.14	50	50	ENSMUST00000235669.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65717119	65756055	+	65715880	65756055	A5SS	0.14	50	50	ENSMUST00000235669.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65732829	65756055	+	65715880	65756055	A5SS	0.14	50	50	ENSMUST00000235669.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715469;65715880	65715798;65756055	+	65715469;65732829	65715968;65756055	MXE	0.5	100	100	ENSMUST00000183319.8	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65716578	65756055	+	65732829	65756055	A5SS&ES	0.14	50	50	ENSMUST00000183319.8	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65717119	65756055	+	65732829	65756055	A5SS&ES	0.14	50	50	ENSMUST00000183319.8	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65715469;65716077	65715798;65756055	+	65715469	65756055	cassetteExon	0.5	100	100	ENSMUST00000237886.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65716578	65756055	+	65715469	65756055	A5SS	0.12	50	50	ENSMUST00000237886.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65717119	65756055	+	65715469	65756055	A5SS	0.12	50	50	ENSMUST00000237886.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65732829	65756055	+	65715469	65756055	A5SS	0.12	50	50	ENSMUST00000237886.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65777440	65784631	+	65777440	65815966	A3SS	0.5	50	50	ENSMUST00000182478.8	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65789703	65815966	+	65777440	65815966	A5SS	0.33	50	50	ENSMUST00000182478.8	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65717119	65756055	+	65716578	65756055	A5SS	0.12	50	50	ENSMUST00000182655.2	ENSMUSG00000042439.14	Zfp532	chr18	protein_coding	zinc finger protein 532
chr18	65843671;65847106	65847011;65853263	+	65843671	65853263	cassetteExon	0.5	100	100	ENSMUST00000115097.8	ENSMUSG00000046610.16	Oacyl	chr18	protein_coding	O-acyltransferase like
chr18	65882180	65882696	+	65880976	65882696	A5SS	0.5	50	50	ENSMUST00000115097.8	ENSMUSG00000046610.16	Oacyl	chr18	protein_coding	O-acyltransferase like
chr18	65831512	65840379	+	65831512	65853263	A3SS	0.5	50	50	ENSMUST00000117694.2	ENSMUSG00000046610.16	Oacyl	chr18	protein_coding	O-acyltransferase like
chr18	65843671	65853263	+	65831512	65853263	A5SS	0.33	50	50	ENSMUST00000117694.2	ENSMUSG00000046610.16	Oacyl	chr18	protein_coding	O-acyltransferase like
chr18	65847106	65853263	+	65831512	65853263	A5SS	0.33	50	50	ENSMUST00000117694.2	ENSMUSG00000046610.16	Oacyl	chr18	protein_coding	O-acyltransferase like
chr18	65942625	65947909	+	65942625;65945885	65945736;65947909	ES	0.2	50	50	ENSMUST00000025394.14	ENSMUSG00000024516.14	Sec11c	chr18	protein_coding	SEC11 homolog C, signal peptidase complex subunit
chr18	65933782;65934563	65934522;65942516	+	65933782	65942516	cassetteExon	0.5	100	100	ENSMUST00000025394.14	ENSMUSG00000024516.14	Sec11c	chr18	protein_coding	SEC11 homolog C, signal peptidase complex subunit
chr18	65934099	65942516	+	65933782	65942516	A5SS	0.25	50	50	ENSMUST00000025394.14	ENSMUSG00000024516.14	Sec11c	chr18	protein_coding	SEC11 homolog C, signal peptidase complex subunit
chr18	65939708	65942516	+	65933782	65942516	A5SS	0.25	50	50	ENSMUST00000025394.14	ENSMUSG00000024516.14	Sec11c	chr18	protein_coding	SEC11 homolog C, signal peptidase complex subunit
chr18	65945812	65947909	+	65945885	65947909	A5SS	0.2	50	50	ENSMUST00000025394.14	ENSMUSG00000024516.14	Sec11c	chr18	protein_coding	SEC11 homolog C, signal peptidase complex subunit
chr18	65947134	65947909	+	65945885	65947909	A5SS	0.2	50	50	ENSMUST00000025394.14	ENSMUSG00000024516.14	Sec11c	chr18	protein_coding	SEC11 homolog C, signal peptidase complex subunit
chr18	65947755	65947909	+	65945885	65947909	A5SS	0.2	50	50	ENSMUST00000025394.14	ENSMUSG00000024516.14	Sec11c	chr18	protein_coding	SEC11 homolog C, signal peptidase complex subunit
chr18	65942625	65947909	+	65942625;65945812	65945736;65947909	ES	0.2	50	50	ENSMUST00000126432.9	ENSMUSG00000024516.14	Sec11c	chr18	protein_coding	SEC11 homolog C, signal peptidase complex subunit
chr18	65947134	65947909	+	65945812	65947909	A5SS	0.2	50	50	ENSMUST00000126432.9	ENSMUSG00000024516.14	Sec11c	chr18	protein_coding	SEC11 homolog C, signal peptidase complex subunit
chr18	65947755	65947909	+	65945812	65947909	A5SS	0.2	50	50	ENSMUST00000126432.9	ENSMUSG00000024516.14	Sec11c	chr18	protein_coding	SEC11 homolog C, signal peptidase complex subunit
chr18	65942625	65947909	+	65942625	65945736	A3SS	0.5	50	50	ENSMUST00000139538.9	ENSMUSG00000024516.14	Sec11c	chr18	protein_coding	SEC11 homolog C, signal peptidase complex subunit
chr18	65947134	65947909	+	65942625	65947909	A5SS	0.2	50	50	ENSMUST00000236847.2	ENSMUSG00000024516.14	Sec11c	chr18	protein_coding	SEC11 homolog C, signal peptidase complex subunit
chr18	65947755	65947909	+	65942625	65947909	A5SS	0.2	50	50	ENSMUST00000236847.2	ENSMUSG00000024516.14	Sec11c	chr18	protein_coding	SEC11 homolog C, signal peptidase complex subunit
chr18	65934099	65942516	+	65934563	65942516	A5SS&ES	0.25	50	50	ENSMUST00000153193.3	ENSMUSG00000024516.14	Sec11c	chr18	protein_coding	SEC11 homolog C, signal peptidase complex subunit
chr18	65939708	65942516	+	65934563	65942516	A5SS	0.25	50	50	ENSMUST00000153193.3	ENSMUSG00000024516.14	Sec11c	chr18	protein_coding	SEC11 homolog C, signal peptidase complex subunit
chr18	65939708	65942516	+	65934099	65942516	A5SS	0.25	50	50	ENSMUST00000235411.2	ENSMUSG00000024516.14	Sec11c	chr18	protein_coding	SEC11 homolog C, signal peptidase complex subunit
chr18	65933782	65942516	+	65934563	65942516	5pMXE	0.25	50	50	ENSMUST00000155668.9	ENSMUSG00000024516.14	Sec11c	chr18	protein_coding	SEC11 homolog C, signal peptidase complex subunit
chr18	65947755	65947909	+	65947134	65947909	A5SS	0.2	50	50	ENSMUST00000126651.3	ENSMUSG00000024516.14	Sec11c	chr18	protein_coding	SEC11 homolog C, signal peptidase complex subunit
chr18	66068560	66071091	-	66062168	66071091	A3SS	0.33	50	50	ENSMUST00000236247.2	ENSMUSG00000024518.5	Rax	chr18	protein_coding	retina and anterior neural fold homeobox
chr18	66070511	66071091	-	66062168	66071091	A3SS	0.33	50	50	ENSMUST00000236247.2	ENSMUSG00000024518.5	Rax	chr18	protein_coding	retina and anterior neural fold homeobox
chr18	66068560;66071344	66071091;66071597	-	66068560	66071597	cassetteExon	0.5	100	100	ENSMUST00000238035.2	ENSMUSG00000024518.5	Rax	chr18	protein_coding	retina and anterior neural fold homeobox
chr18	66068560	66070406	-	66068560	66071597	A5SS	0.33	50	50	ENSMUST00000238035.2	ENSMUSG00000024518.5	Rax	chr18	protein_coding	retina and anterior neural fold homeobox
chr18	66068560;66070511	66070406;66071091	-	66068560	66071091	cassetteExon	0.5	100	100	ENSMUST00000025396.5	ENSMUSG00000024518.5	Rax	chr18	protein_coding	retina and anterior neural fold homeobox
chr18	66068560	66071091	-	66068560	66070406	5pMXE	0.33	50	50	ENSMUST00000236444.2	ENSMUSG00000024518.5	Rax	chr18	protein_coding	retina and anterior neural fold homeobox
chr18	66068560	66071597	-	66071344	66071597	3pMXE	0.5	50	50	ENSMUST00000237506.2	ENSMUSG00000024518.5	Rax	chr18	protein_coding	retina and anterior neural fold homeobox
chr18	66070688	66071059	+	66070695	66071059	A5SS	0.5	50	50	ENSMUST00000181100.2	ENSMUSG00000097907.3	Raxos1	chr18	lncRNA	retina and anterior neural fold homeobox, opposite strand 1
chr18	66131791	66152736	-	66131791	66135445	5pMXE	0.33	50	50	ENSMUST00000048260.15	ENSMUSG00000041891.17	Lman1	chr18	protein_coding	lectin, mannose-binding, 1
chr18	66131791	66155370	-	66131791	66135445	5pMXE	0.33	50	50	ENSMUST00000048260.15	ENSMUSG00000041891.17	Lman1	chr18	protein_coding	lectin, mannose-binding, 1
chr18	66122248	66124403	-	66120976	66124403	A3SS	0.5	50	50	ENSMUST00000048260.15	ENSMUSG00000041891.17	Lman1	chr18	protein_coding	lectin, mannose-binding, 1
chr18	66115781	66116892	-	66115781	66116896	A5SS	0.5	50	50	ENSMUST00000048260.15	ENSMUSG00000041891.17	Lman1	chr18	protein_coding	lectin, mannose-binding, 1
chr18	66131791	66155370	-	66131791	66152736	5pMXE	0.33	50	50	ENSMUST00000150133.3	ENSMUSG00000041891.17	Lman1	chr18	protein_coding	lectin, mannose-binding, 1
chr18	66199689	66204272	-	66199689;66199939	66199800;66204272	ES	0.5	50	50	ENSMUST00000146610.2	ENSMUSG00000046318.17	Ccbe1	chr18	protein_coding	collagen and calcium binding EGF domains 1
chr18	66227121;66397193	66397101;66424203	-	66227121	66424203	cassetteExon	0.5	100	100	ENSMUST00000146610.2	ENSMUSG00000046318.17	Ccbe1	chr18	protein_coding	collagen and calcium binding EGF domains 1
chr18	66194591	66198940	-	66180540	66198940	A3SS	0.5	50	50	ENSMUST00000146610.2	ENSMUSG00000046318.17	Ccbe1	chr18	protein_coding	collagen and calcium binding EGF domains 1
chr18	66402849	66424203	-	66227121	66424203	A3SS	0.25	50	50	ENSMUST00000146610.2	ENSMUSG00000046318.17	Ccbe1	chr18	protein_coding	collagen and calcium binding EGF domains 1
chr18	66403264	66424203	-	66227121	66424203	A3SS	0.25	50	50	ENSMUST00000146610.2	ENSMUSG00000046318.17	Ccbe1	chr18	protein_coding	collagen and calcium binding EGF domains 1
chr18	66424283	66428349	-	66424283	66424692	5pMXE	0.5	50	50	ENSMUST00000061103.14	ENSMUSG00000046318.17	Ccbe1	chr18	protein_coding	collagen and calcium binding EGF domains 1
chr18	66402849	66424203	-	66397193	66424203	A3SS	0.25	50	50	ENSMUST00000236848.2	ENSMUSG00000046318.17	Ccbe1	chr18	protein_coding	collagen and calcium binding EGF domains 1
chr18	66403264	66424203	-	66397193	66424203	A3SS	0.25	50	50	ENSMUST00000236848.2	ENSMUSG00000046318.17	Ccbe1	chr18	protein_coding	collagen and calcium binding EGF domains 1
chr18	66403264	66424203	-	66402849	66424203	A3SS	0.25	50	50	ENSMUST00000236402.2	ENSMUSG00000046318.17	Ccbe1	chr18	protein_coding	collagen and calcium binding EGF domains 1
chr18	66445409	66451292	+	66445409;66450146	66449900;66451292	ES	0.5	50	50	ENSMUST00000153479.2	ENSMUSG00000085055.3	Gm15958	chr18	lncRNA	predicted gene 15958
chr18	66425078	66445330	+	66424717	66445330	A5SS	0.33	50	50	ENSMUST00000153479.2	ENSMUSG00000085055.3	Gm15958	chr18	lncRNA	predicted gene 15958
chr18	66426401	66445330	+	66424717	66445330	A5SS	0.33	50	50	ENSMUST00000153479.2	ENSMUSG00000085055.3	Gm15958	chr18	lncRNA	predicted gene 15958
chr18	66425078	66445330	+	66426401	66445330	A5SS&ES	0.5	50	50	ENSMUST00000143568.2	ENSMUSG00000085055.3	Gm15958	chr18	lncRNA	predicted gene 15958
chr18	66591883	66596341	+	66591883;66594069	66593914;66596341	ES	0.5	50	50	ENSMUST00000025399.9	ENSMUSG00000024521.9	Pmaip1	chr18	protein_coding	phorbol-12-myristate-13-acetate-induced protein 1
chr18	66591708	66593914	+	66591883	66593914	A5SS	0.5	50	50	ENSMUST00000025399.9	ENSMUSG00000024521.9	Pmaip1	chr18	protein_coding	phorbol-12-myristate-13-acetate-induced protein 1
chr18	66591883	66596341	+	66594069	66596341	A5SS&ES	0.5	50	50	ENSMUST00000236933.2	ENSMUSG00000024521.9	Pmaip1	chr18	protein_coding	phorbol-12-myristate-13-acetate-induced protein 1
chr18	66637533;66638523	66638381;66640345	+	66637533	66640345	cassetteExon	0.5	100	100	ENSMUST00000236110.2	ENSMUSG00000118376.2	Gm9926	chr18	lncRNA	predicted gene 9926
chr18	66637533;66638523	66638415;66640345	+	66637533	66640345	cassetteExon	0.5	100	100	ENSMUST00000236110.2	ENSMUSG00000118376.2	Gm9926	chr18	lncRNA	predicted gene 9926
chr18	66637533	66638415	+	66637533	66638381	A3SS	0.33	50	50	ENSMUST00000236935.2	ENSMUSG00000118376.2	Gm9926	chr18	lncRNA	predicted gene 9926
chr18	67067095	67082913	-	67067095;67069783	67069656;67082913	ES	0.5	50	50	ENSMUST00000237328.2	ENSMUSG00000118216.2	Gm19784	chr18	lncRNA	predicted gene, 19784
chr18	67058278	67059268	-	67058681	67059268	A3SS	0.5	50	50	ENSMUST00000237328.2	ENSMUSG00000118216.2	Gm19784	chr18	lncRNA	predicted gene, 19784
chr18	67268709	67273743	+	67268709	67324441	A3SS	0.5	50	50	ENSMUST00000025402.15	ENSMUSG00000024524.18	Gnal	chr18	protein_coding	guanine nucleotide binding protein, alpha stimulating, olfactory type
chr18	67324538	67325200	+	67324538	67344119	A3SS	0.5	50	50	ENSMUST00000025402.15	ENSMUSG00000024524.18	Gnal	chr18	protein_coding	guanine nucleotide binding protein, alpha stimulating, olfactory type
chr18	67267041	67267284	+	67221944	67267284	A5SS	0.5	50	50	ENSMUST00000025402.15	ENSMUSG00000024524.18	Gnal	chr18	protein_coding	guanine nucleotide binding protein, alpha stimulating, olfactory type
chr18	67266247	67266796	+	67266090	67266796	A5SS	0.5	50	50	ENSMUST00000236771.2	ENSMUSG00000024524.18	Gnal	chr18	protein_coding	guanine nucleotide binding protein, alpha stimulating, olfactory type
chr18	67360995	67361084	-	67360949	67361084	A3SS	0.5	50	50	ENSMUST00000073054.5	ENSMUSG00000062526.5	Mppe1	chr18	protein_coding	metallophosphoesterase 1
chr18	67366780	67370750	-	67366780	67370421	A5SS	0.5	50	50	ENSMUST00000073054.5	ENSMUSG00000062526.5	Mppe1	chr18	protein_coding	metallophosphoesterase 1
chr18	67377118	67378177	-	67377118	67378453	A5SS	0.5	50	50	ENSMUST00000073054.5	ENSMUSG00000062526.5	Mppe1	chr18	protein_coding	metallophosphoesterase 1
chr18	67422576	67428029	+	67422576	67435246	A3SS	0.5	50	50	ENSMUST00000025403.8	ENSMUSG00000024525.8	Impa2	chr18	protein_coding	inositol monophosphatase 2
chr18	67441478	67442122	+	67439845	67442122	A5SS	0.33	50	50	ENSMUST00000025403.8	ENSMUSG00000024525.8	Impa2	chr18	protein_coding	inositol monophosphatase 2
chr18	67441803	67442122	+	67439845	67442122	A5SS	0.33	50	50	ENSMUST00000025403.8	ENSMUSG00000024525.8	Impa2	chr18	protein_coding	inositol monophosphatase 2
chr18	67441803	67442122	+	67441478	67442122	A5SS	0.33	50	50	ENSMUST00000235632.2	ENSMUSG00000024525.8	Impa2	chr18	protein_coding	inositol monophosphatase 2
chr18	67457789	67461123	-	67457789	67460974	5pMXE	0.25	50	50	ENSMUST00000144078.8	ENSMUSG00000046415.12	B430212C06Rik	chr18	lncRNA	RIKEN cDNA B430212C06 gene
chr18	67457789	67476394	-	67457789	67460974	5pMXE	0.25	50	50	ENSMUST00000144078.8	ENSMUSG00000046415.12	B430212C06Rik	chr18	lncRNA	RIKEN cDNA B430212C06 gene
chr18	67457789	67477072	-	67457789	67460974	5pMXE	0.25	50	50	ENSMUST00000144078.8	ENSMUSG00000046415.12	B430212C06Rik	chr18	lncRNA	RIKEN cDNA B430212C06 gene
chr18	67457789	67461123	-	67457789	67477072	A5SS	0.25	50	50	ENSMUST00000145081.8	ENSMUSG00000046415.12	B430212C06Rik	chr18	lncRNA	RIKEN cDNA B430212C06 gene
chr18	67457789	67476394	-	67457789	67477072	A5SS	0.25	50	50	ENSMUST00000145081.8	ENSMUSG00000046415.12	B430212C06Rik	chr18	lncRNA	RIKEN cDNA B430212C06 gene
chr18	67457789	67461123	-	67457789	67476394	A5SS	0.25	50	50	ENSMUST00000127708.8	ENSMUSG00000046415.12	B430212C06Rik	chr18	lncRNA	RIKEN cDNA B430212C06 gene
chr18	67457641	67461123	-	67457789	67461123	A3SS	0.5	50	50	ENSMUST00000128943.2	ENSMUSG00000046415.12	B430212C06Rik	chr18	lncRNA	RIKEN cDNA B430212C06 gene
chr18	67630384	67636501	-	67630384;67634311	67634138;67636501	ES	0.5	50	50	ENSMUST00000045105.13	ENSMUSG00000024533.18	Spire1	chr18	protein_coding	spire type actin nucleation factor 1
chr18	67639796;67645949	67645911;67652361	-	67639796	67652361	cassetteExon	0.5	100	100	ENSMUST00000045105.13	ENSMUSG00000024533.18	Spire1	chr18	protein_coding	spire type actin nucleation factor 1
chr18	67678810	67682194	-	67678810	67685644	A5SS	0.5	50	50	ENSMUST00000045105.13	ENSMUSG00000024533.18	Spire1	chr18	protein_coding	spire type actin nucleation factor 1
chr18	67771411	67771824	-	67771411	67773078	A5SS	0.33	50	50	ENSMUST00000097542.4	ENSMUSG00000073542.4	Cep76	chr18	protein_coding	centrosomal protein 76
chr18	67771411	67772007	-	67771411	67773078	A5SS	0.33	50	50	ENSMUST00000097542.4	ENSMUSG00000073542.4	Cep76	chr18	protein_coding	centrosomal protein 76
chr18	67771411	67772007	-	67771411	67771824	5pMXE	0.33	50	50	ENSMUST00000236857.2	ENSMUSG00000073542.4	Cep76	chr18	protein_coding	centrosomal protein 76
chr18	67775048	67777379	+	67774805	67777379	A5SS	0.5	50	50	ENSMUST00000025418.4	ENSMUSG00000024537.6	Psmg2	chr18	protein_coding	proteasome (prosome, macropain) assembly chaperone 2
chr18	67808956	67810780	-	67808899	67810780	A3SS	0.5	50	50	ENSMUST00000120934.8	ENSMUSG00000024539.18	Ptpn2	chr18	protein_coding	protein tyrosine phosphatase, non-receptor type 2
chr18	67822059	67822659	-	67822059	67828694	A5SS	0.5	50	50	ENSMUST00000120934.8	ENSMUSG00000024539.18	Ptpn2	chr18	protein_coding	protein tyrosine phosphatase, non-receptor type 2
chr18	67909342	67922422	-	67901444	67922422	A3SS	0.5	50	50	ENSMUST00000237403.2	ENSMUSG00000118134.2	4930549G23Rik	chr18	lncRNA	RIKEN cDNA 4930549G23 gene
chr18	67922547	67923889	-	67922547	67923748	A5SS	0.5	50	50	ENSMUST00000237403.2	ENSMUSG00000118134.2	4930549G23Rik	chr18	lncRNA	RIKEN cDNA 4930549G23 gene
chr18	67999625	68002401	+	67999625;68001617	68001512;68002401	ES	0.5	50	50	ENSMUST00000025425.7	ENSMUSG00000024542.10	Cep192	chr18	protein_coding	centrosomal protein 192
chr18	68361215	68368726	+	68239762	68368726	A5SS	0.5	50	50	ENSMUST00000063775.5	ENSMUSG00000024544.10	Ldlrad4	chr18	protein_coding	low density lipoprotein receptor class A domain containing 4
chr18	68368880	68383642	+	68368880	68393655	A3SS	0.5	50	50	ENSMUST00000236987.2	ENSMUSG00000024544.10	Ldlrad4	chr18	protein_coding	low density lipoprotein receptor class A domain containing 4
chr18	68409345;68412499	68412338;68433145	-	68409345	68433145	cassetteExon	0.5	100	100	ENSMUST00000042852.7	ENSMUSG00000038121.7	Fam210a	chr18	protein_coding	family with sequence similarity 210, member A
chr18	68446917	68451065	+	68446917;68447223	68447059;68451065	ES	0.5	50	50	ENSMUST00000009679.11	ENSMUSG00000009535.14	Rnmt	chr18	protein_coding	RNA (guanine-7-) methyltransferase
chr18	68433496;68436566	68436503;68438851	+	68433496	68438851	cassetteExon	0.5	100	100	ENSMUST00000009679.11	ENSMUSG00000009535.14	Rnmt	chr18	protein_coding	RNA (guanine-7-) methyltransferase
chr18	68433694	68438851	+	68433496	68438851	A5SS	0.25	50	50	ENSMUST00000009679.11	ENSMUSG00000009535.14	Rnmt	chr18	protein_coding	RNA (guanine-7-) methyltransferase
chr18	68438189	68438851	+	68433496	68438851	A5SS	0.25	50	50	ENSMUST00000009679.11	ENSMUSG00000009535.14	Rnmt	chr18	protein_coding	RNA (guanine-7-) methyltransferase
chr18	68433694	68438851	+	68436566	68438851	A5SS&ES	0.25	50	50	ENSMUST00000131075.8	ENSMUSG00000009535.14	Rnmt	chr18	protein_coding	RNA (guanine-7-) methyltransferase
chr18	68438189	68438851	+	68436566	68438851	A5SS	0.25	50	50	ENSMUST00000131075.8	ENSMUSG00000009535.14	Rnmt	chr18	protein_coding	RNA (guanine-7-) methyltransferase
chr18	68446917	68451065	+	68446917	68447059	3pMXE	0.5	50	50	ENSMUST00000151833.2	ENSMUSG00000009535.14	Rnmt	chr18	protein_coding	RNA (guanine-7-) methyltransferase
chr18	68438189	68438851	+	68433694	68438851	A5SS	0.25	50	50	ENSMUST00000139111.2	ENSMUSG00000009535.14	Rnmt	chr18	protein_coding	RNA (guanine-7-) methyltransferase
chr18	69653097	69766648	+	69653097	69697105	3pMXE	0.33	50	50	ENSMUST00000203002.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69482215;69546778	69546713;69594933	+	69482215	69594933	cassetteExon	0.5	100	100	ENSMUST00000203002.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69482215	69490110	+	69482215	69594933	A3SS	0.25	50	50	ENSMUST00000203002.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69598518	69620619	+	69598518	69653036	A3SS	0.5	50	50	ENSMUST00000203002.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69653097	69697108	+	69653097	69697105	A3SS	0.33	50	50	ENSMUST00000203002.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69478096	69480350	+	69476473	69480350	A5SS	0.2	50	50	ENSMUST00000203002.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69478096	69482143	+	69480441	69482143	A5SS&ES	0.16	50	50	ENSMUST00000203002.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69478989	69480350	+	69476473	69480350	A5SS	0.2	50	50	ENSMUST00000203002.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69478989	69482143	+	69480441	69482143	A5SS&ES	0.16	50	50	ENSMUST00000203002.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69479010	69480350	+	69476473	69480350	A5SS	0.2	50	50	ENSMUST00000203002.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69479436	69480350	+	69476473	69480350	A5SS	0.2	50	50	ENSMUST00000203002.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69479436	69482143	+	69480441	69482143	A5SS&ES	0.16	50	50	ENSMUST00000203002.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69481471	69482143	+	69480441	69482143	A5SS	0.16	50	50	ENSMUST00000203002.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69481702	69482143	+	69480441	69482143	A5SS	0.16	50	50	ENSMUST00000203002.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69549354	69594933	+	69482215	69594933	A5SS	0.33	50	50	ENSMUST00000203002.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69632563	69653036	+	69598518	69653036	A5SS	0.14	50	50	ENSMUST00000203002.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69634069	69653036	+	69598518	69653036	A5SS	0.14	50	50	ENSMUST00000203002.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69634073	69653036	+	69598518	69653036	A5SS	0.14	50	50	ENSMUST00000203002.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69634093	69653036	+	69598518	69653036	A5SS	0.14	50	50	ENSMUST00000203002.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69652931	69653036	+	69598518	69653036	A5SS	0.14	50	50	ENSMUST00000203002.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69654556	69697105	+	69653097	69697105	A5SS	0.16	50	50	ENSMUST00000203002.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69654757	69697105	+	69653097	69697105	A5SS	0.16	50	50	ENSMUST00000203002.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69655052	69697105	+	69653097	69697105	A5SS	0.16	50	50	ENSMUST00000203002.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69655611	69697105	+	69653097	69697105	A5SS	0.16	50	50	ENSMUST00000203002.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69696306	69697105	+	69653097	69697105	A5SS	0.16	50	50	ENSMUST00000203002.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69478096	69482143	+	69478096;69480441	69480350;69482143	ES	0.16	50	50	ENSMUST00000066717.12	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69766753	69775954	+	69766753;69770035	69769902;69775954	ES	0.33	50	50	ENSMUST00000066717.12	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69784360	69788032	+	69784360;69785543	69785465;69788032	ES	0.5	50	50	ENSMUST00000066717.12	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69482215	69490110	+	69482215	69546713	A3SS	0.25	50	50	ENSMUST00000066717.12	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69785543	69788035	+	69785543	69788032	A3SS	0.33	50	50	ENSMUST00000066717.12	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69785543	69814674	+	69785543	69788032	A3SS&ES	0.33	50	50	ENSMUST00000066717.12	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69478989	69480350	+	69478096	69480350	A5SS	0.2	50	50	ENSMUST00000066717.12	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69479010	69480350	+	69478096	69480350	A5SS	0.2	50	50	ENSMUST00000066717.12	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69479436	69480350	+	69478096	69480350	A5SS	0.2	50	50	ENSMUST00000066717.12	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69549354	69594933	+	69546778	69594933	A5SS	0.33	50	50	ENSMUST00000066717.12	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69726655	69766648	+	69697755	69766648	A5SS	0.14	50	50	ENSMUST00000066717.12	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69726655	69775954	+	69770035	69775954	A5SS&ES	0.33	50	50	ENSMUST00000066717.12	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69727063	69766648	+	69697755	69766648	A5SS	0.14	50	50	ENSMUST00000066717.12	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69727479	69766648	+	69697755	69766648	A5SS	0.14	50	50	ENSMUST00000066717.12	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69732763	69766648	+	69697755	69766648	A5SS	0.14	50	50	ENSMUST00000066717.12	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69745743	69766648	+	69697755	69766648	A5SS	0.14	50	50	ENSMUST00000066717.12	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69811188	69814640	+	69811200	69814640	A5SS	0.5	50	50	ENSMUST00000066717.12	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69478989	69482143	+	69478096	69482143	A5SS	0.16	50	50	ENSMUST00000128706.8	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69479436	69482143	+	69478096	69482143	A5SS	0.16	50	50	ENSMUST00000128706.8	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69481471	69482143	+	69478096	69482143	A5SS	0.16	50	50	ENSMUST00000128706.8	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69481702	69482143	+	69478096	69482143	A5SS	0.16	50	50	ENSMUST00000128706.8	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69654556	69697108	+	69653097	69697108	A5SS	0.2	50	50	ENSMUST00000202674.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69655052	69697108	+	69653097	69697108	A5SS	0.2	50	50	ENSMUST00000202674.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69655611	69697108	+	69653097	69697108	A5SS	0.2	50	50	ENSMUST00000202674.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69696436	69697108	+	69653097	69697108	A5SS	0.2	50	50	ENSMUST00000202674.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69479436	69482143	+	69479436;69480441	69480350;69482143	ES	0.2	50	50	ENSMUST00000202116.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69478989	69480350	+	69479436	69480350	A5SS	0.2	50	50	ENSMUST00000202116.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69479010	69480350	+	69479436	69480350	A5SS	0.2	50	50	ENSMUST00000202116.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69478989	69480350	+	69479010	69480350	A5SS	0.2	50	50	ENSMUST00000114982.8	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69478989	69482143	+	69478989;69480441	69480350;69482143	ES	0.2	50	50	ENSMUST00000202772.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69653097	69697108	+	69653097	69766648	A3SS	0.33	50	50	ENSMUST00000202772.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69697755	69766648	+	69653097	69766648	A5SS	0.14	50	50	ENSMUST00000202772.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69697755	69784293	+	69776086	69784293	A5SS&ES	0.5	50	50	ENSMUST00000202772.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69726655	69766648	+	69653097	69766648	A5SS	0.14	50	50	ENSMUST00000202772.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69727063	69766648	+	69653097	69766648	A5SS	0.14	50	50	ENSMUST00000202772.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69727479	69766648	+	69653097	69766648	A5SS	0.14	50	50	ENSMUST00000202772.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69732763	69766648	+	69653097	69766648	A5SS	0.14	50	50	ENSMUST00000202772.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69745743	69766648	+	69653097	69766648	A5SS	0.14	50	50	ENSMUST00000202772.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69766753	69775954	+	69766753	69769902	3pMXE	0.5	50	50	ENSMUST00000201288.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69784360	69788032	+	69784360	69785465	A3SS&ES	0.5	50	50	ENSMUST00000202354.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69785543	69814674	+	69785543	69788035	A3SS&ES	0.33	50	50	ENSMUST00000202354.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69479436	69482143	+	69478989	69482143	A5SS	0.16	50	50	ENSMUST00000202354.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69481471	69482143	+	69478989	69482143	A5SS	0.16	50	50	ENSMUST00000202354.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69481702	69482143	+	69478989	69482143	A5SS	0.16	50	50	ENSMUST00000202354.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69697755	69784293	+	69697755	69766648	3pMXE	0.5	50	50	ENSMUST00000201235.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69481471	69482143	+	69479436	69482143	A5SS	0.16	50	50	ENSMUST00000201235.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69481702	69482143	+	69479436	69482143	A5SS	0.16	50	50	ENSMUST00000201235.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69482215	69653036	+	69482215	69490110	3pMXE	0.25	50	50	ENSMUST00000202058.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69481702	69482143	+	69481471	69482143	A5SS	0.16	50	50	ENSMUST00000201299.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69482215	69546713	+	69482215	69653036	A3SS	0.25	50	50	ENSMUST00000201124.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69482215	69594933	+	69482215	69653036	A3SS	0.25	50	50	ENSMUST00000201124.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69598518	69653036	+	69482215	69653036	A5SS	0.14	50	50	ENSMUST00000201124.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69632563	69653036	+	69482215	69653036	A5SS	0.14	50	50	ENSMUST00000201124.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69634069	69653036	+	69482215	69653036	A5SS	0.14	50	50	ENSMUST00000201124.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69634073	69653036	+	69482215	69653036	A5SS	0.14	50	50	ENSMUST00000201124.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69634093	69653036	+	69482215	69653036	A5SS	0.14	50	50	ENSMUST00000201124.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69652931	69653036	+	69482215	69653036	A5SS	0.14	50	50	ENSMUST00000201124.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69634069	69653036	+	69632563	69653036	A5SS	0.14	50	50	ENSMUST00000201181.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69634073	69653036	+	69632563	69653036	A5SS	0.14	50	50	ENSMUST00000201181.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69634093	69653036	+	69632563	69653036	A5SS	0.14	50	50	ENSMUST00000201181.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69652931	69653036	+	69632563	69653036	A5SS	0.14	50	50	ENSMUST00000201181.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69634069	69653036	+	69634093	69653036	A5SS	0.14	50	50	ENSMUST00000207214.2	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69634073	69653036	+	69634093	69653036	A5SS	0.14	50	50	ENSMUST00000207214.2	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69652931	69653036	+	69634093	69653036	A5SS	0.14	50	50	ENSMUST00000207214.2	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69634073	69653036	+	69634069	69653036	A5SS	0.14	50	50	ENSMUST00000201094.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69652931	69653036	+	69634069	69653036	A5SS	0.14	50	50	ENSMUST00000201094.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69652931	69653036	+	69634073	69653036	A5SS	0.14	50	50	ENSMUST00000200703.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69654556	69697105	+	69654556	69697108	A3SS	0.5	50	50	ENSMUST00000202350.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69655052	69697108	+	69654556	69697108	A5SS	0.2	50	50	ENSMUST00000202350.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69655611	69697108	+	69654556	69697108	A5SS	0.2	50	50	ENSMUST00000202350.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69696436	69697108	+	69654556	69697108	A5SS	0.2	50	50	ENSMUST00000202350.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69654757	69697105	+	69654556	69697105	A5SS	0.16	50	50	ENSMUST00000202477.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69655052	69697105	+	69654556	69697105	A5SS	0.16	50	50	ENSMUST00000202477.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69655611	69697105	+	69654556	69697105	A5SS	0.16	50	50	ENSMUST00000202477.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69696306	69697105	+	69654556	69697105	A5SS	0.16	50	50	ENSMUST00000202477.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69655052	69697108	+	69655052	69697105	A3SS	0.5	50	50	ENSMUST00000200862.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69654757	69697105	+	69655052	69697105	A5SS	0.16	50	50	ENSMUST00000200862.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69655611	69697105	+	69655052	69697105	A5SS	0.16	50	50	ENSMUST00000200862.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69696306	69697105	+	69655052	69697105	A5SS	0.16	50	50	ENSMUST00000200862.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69655611	69697105	+	69654757	69697105	A5SS	0.16	50	50	ENSMUST00000125154.8	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69696306	69697105	+	69654757	69697105	A5SS	0.16	50	50	ENSMUST00000125154.8	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69655611	69697108	+	69655052	69697108	A5SS	0.2	50	50	ENSMUST00000202057.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69696436	69697108	+	69655052	69697108	A5SS	0.2	50	50	ENSMUST00000202057.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69655611	69697108	+	69655611	69697105	A3SS	0.5	50	50	ENSMUST00000201627.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69696306	69697105	+	69655611	69697105	A5SS	0.16	50	50	ENSMUST00000201627.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69696436	69697108	+	69655611	69697108	A5SS	0.2	50	50	ENSMUST00000209174.2	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69727063	69766648	+	69726655	69766648	A5SS	0.14	50	50	ENSMUST00000114978.9	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69727479	69766648	+	69726655	69766648	A5SS	0.14	50	50	ENSMUST00000114978.9	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69732763	69766648	+	69726655	69766648	A5SS	0.14	50	50	ENSMUST00000114978.9	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69745743	69766648	+	69726655	69766648	A5SS	0.14	50	50	ENSMUST00000114978.9	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69726655;69766753	69766648;69775954	+	69726655	69775954	cassetteExon	0.5	100	100	ENSMUST00000201037.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69726655	69775954	+	69726655	69766648	3pMXE	0.5	50	50	ENSMUST00000201589.2	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69727479	69766648	+	69727063	69766648	A5SS	0.14	50	50	ENSMUST00000200921.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69732763	69766648	+	69727063	69766648	A5SS	0.14	50	50	ENSMUST00000200921.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69745743	69766648	+	69727063	69766648	A5SS	0.14	50	50	ENSMUST00000200921.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69732763	69766648	+	69727479	69766648	A5SS	0.14	50	50	ENSMUST00000201964.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69745743	69766648	+	69727479	69766648	A5SS	0.14	50	50	ENSMUST00000201964.4	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	69745743	69766648	+	69732763	69766648	A5SS	0.14	50	50	ENSMUST00000145918.5	ENSMUSG00000053477.19	Tcf4	chr18	protein_coding	transcription factor 4
chr18	70058691	70071913	+	70058604	70071913	A5SS	0.5	50	50	ENSMUST00000151773.2	ENSMUSG00000038903.14	Ccdc68	chr18	protein_coding	coiled-coil domain containing 68
chr18	70058691	70069234	+	70058691	70071913	A3SS	0.5	50	50	ENSMUST00000043929.11	ENSMUSG00000038903.14	Ccdc68	chr18	protein_coding	coiled-coil domain containing 68
chr18	70080250	70089053	+	70080250	70099861	A3SS	0.5	50	50	ENSMUST00000080050.6	ENSMUSG00000038903.14	Ccdc68	chr18	protein_coding	coiled-coil domain containing 68
chr18	70094614	70099861	+	70080250	70099861	A5SS	0.5	50	50	ENSMUST00000080050.6	ENSMUSG00000038903.14	Ccdc68	chr18	protein_coding	coiled-coil domain containing 68
chr18	70080455	70102551	-	70076894	70102551	A3SS	0.5	50	50	ENSMUST00000139488.2	ENSMUSG00000084948.2	1700061H18Rik	chr18	lncRNA	RIKEN cDNA 1700061H18 gene
chr18	70129311	70182509	-	70129311	70274389	A5SS	0.33	50	50	ENSMUST00000121693.8	ENSMUSG00000024511.16	Rab27b	chr18	protein_coding	RAB27B, member RAS oncogene family
chr18	70129311	70186197	-	70129311	70274389	A5SS	0.33	50	50	ENSMUST00000121693.8	ENSMUSG00000024511.16	Rab27b	chr18	protein_coding	RAB27B, member RAS oncogene family
chr18	70129311	70186197	-	70129311;70182679	70182509;70186197	ES	0.5	50	50	ENSMUST00000117692.8	ENSMUSG00000024511.16	Rab27b	chr18	protein_coding	RAB27B, member RAS oncogene family
chr18	70589615	70597033	-	70589615;70591519	70591388;70597033	ES	0.33	50	50	ENSMUST00000213066.2	ENSMUSG00000044906.7	4930503L19Rik	chr18	protein_coding	RIKEN cDNA 4930503L19 gene
chr18	70586459;70589615	70589545;70597033	-	70586459	70597033	cassetteExon	0.5	100	100	ENSMUST00000212683.2	ENSMUSG00000044906.7	4930503L19Rik	chr18	protein_coding	RIKEN cDNA 4930503L19 gene
chr18	70591519	70597033	-	70586459	70597033	A3SS	0.33	50	50	ENSMUST00000212683.2	ENSMUSG00000044906.7	4930503L19Rik	chr18	protein_coding	RIKEN cDNA 4930503L19 gene
chr18	70586459	70600402	-	70586459	70597033	A5SS&ES	0.33	50	50	ENSMUST00000212683.2	ENSMUSG00000044906.7	4930503L19Rik	chr18	protein_coding	RIKEN cDNA 4930503L19 gene
chr18	70597135	70600402	-	70597135	70600406	A5SS	0.5	50	50	ENSMUST00000212683.2	ENSMUSG00000044906.7	4930503L19Rik	chr18	protein_coding	RIKEN cDNA 4930503L19 gene
chr18	70601588	70602565	-	70601588	70602520	A5SS	0.5	50	50	ENSMUST00000212683.2	ENSMUSG00000044906.7	4930503L19Rik	chr18	protein_coding	RIKEN cDNA 4930503L19 gene
chr18	70586459	70600402	-	70586459	70589545	A5SS&ES	0.33	50	50	ENSMUST00000067556.4	ENSMUSG00000044906.7	4930503L19Rik	chr18	protein_coding	RIKEN cDNA 4930503L19 gene
chr18	70600556	70601292	-	70600556	70600830	A5SS	0.33	50	50	ENSMUST00000067556.4	ENSMUSG00000044906.7	4930503L19Rik	chr18	protein_coding	RIKEN cDNA 4930503L19 gene
chr18	70600556	70602565	-	70600556	70600830	A5SS&ES	0.33	50	50	ENSMUST00000067556.4	ENSMUSG00000044906.7	4930503L19Rik	chr18	protein_coding	RIKEN cDNA 4930503L19 gene
chr18	70600556;70601588	70601292;70602565	-	70600556	70602565	cassetteExon	0.5	100	100	ENSMUST00000211817.2	ENSMUSG00000044906.7	4930503L19Rik	chr18	protein_coding	RIKEN cDNA 4930503L19 gene
chr18	70586459;70597135	70597033;70600402	-	70586459	70600402	cassetteExon	0.5	100	100	ENSMUST00000212982.2	ENSMUSG00000044906.7	4930503L19Rik	chr18	protein_coding	RIKEN cDNA 4930503L19 gene
chr18	70605688	70606273	+	70605639	70606273	A5SS	0.25	50	50	ENSMUST00000114959.9	ENSMUSG00000079608.11	Stard6	chr18	protein_coding	StAR-related lipid transfer (START) domain containing 6
chr18	70605723	70606273	+	70605639	70606273	A5SS	0.25	50	50	ENSMUST00000114959.9	ENSMUSG00000079608.11	Stard6	chr18	protein_coding	StAR-related lipid transfer (START) domain containing 6
chr18	70605796	70606273	+	70605639	70606273	A5SS	0.25	50	50	ENSMUST00000114959.9	ENSMUSG00000079608.11	Stard6	chr18	protein_coding	StAR-related lipid transfer (START) domain containing 6
chr18	70626732	70629185	+	70616609	70629185	A5SS	0.33	50	50	ENSMUST00000114959.9	ENSMUSG00000079608.11	Stard6	chr18	protein_coding	StAR-related lipid transfer (START) domain containing 6
chr18	70605723	70606273	+	70605688	70606273	A5SS	0.25	50	50	ENSMUST00000168249.9	ENSMUSG00000079608.11	Stard6	chr18	protein_coding	StAR-related lipid transfer (START) domain containing 6
chr18	70605796	70606273	+	70605688	70606273	A5SS	0.25	50	50	ENSMUST00000168249.9	ENSMUSG00000079608.11	Stard6	chr18	protein_coding	StAR-related lipid transfer (START) domain containing 6
chr18	70605796	70606273	+	70605723	70606273	A5SS	0.25	50	50	ENSMUST00000164223.8	ENSMUSG00000079608.11	Stard6	chr18	protein_coding	StAR-related lipid transfer (START) domain containing 6
chr18	70609264	70609453	+	70609264	70629185	A3SS	0.5	50	50	ENSMUST00000174667.2	ENSMUSG00000079608.11	Stard6	chr18	protein_coding	StAR-related lipid transfer (START) domain containing 6
chr18	70616609	70629185	+	70609264	70629185	A5SS	0.33	50	50	ENSMUST00000174667.2	ENSMUSG00000079608.11	Stard6	chr18	protein_coding	StAR-related lipid transfer (START) domain containing 6
chr18	70626732	70629185	+	70609264	70629185	A5SS	0.33	50	50	ENSMUST00000174667.2	ENSMUSG00000079608.11	Stard6	chr18	protein_coding	StAR-related lipid transfer (START) domain containing 6
chr18	70661898	70663259	-	70661898	70662822	5pMXE	0.5	50	50	ENSMUST00000161542.8	ENSMUSG00000038425.19	Poli	chr18	protein_coding	polymerase (DNA directed), iota
chr18	70658530	70659628	-	70658599	70659628	A3SS	0.5	50	50	ENSMUST00000161542.8	ENSMUSG00000038425.19	Poli	chr18	protein_coding	polymerase (DNA directed), iota
chr18	70642815	70643741	-	70642815	70649865	A5SS	0.5	50	50	ENSMUST00000161542.8	ENSMUSG00000038425.19	Poli	chr18	protein_coding	polymerase (DNA directed), iota
chr18	70656470	70657802	-	70656470	70658447	A5SS	0.5	50	50	ENSMUST00000161542.8	ENSMUSG00000038425.19	Poli	chr18	protein_coding	polymerase (DNA directed), iota
chr18	70726411;70727470	70727347;70749636	+	70726411	70749636	cassetteExon	0.5	100	100	ENSMUST00000074058.11	ENSMUSG00000024513.17	Mbd2	chr18	protein_coding	methyl-CpG binding domain protein 2
chr18	70713883	70715488	+	70713883	70726274	A3SS	0.5	50	50	ENSMUST00000074058.11	ENSMUSG00000024513.17	Mbd2	chr18	protein_coding	methyl-CpG binding domain protein 2
chr18	71511898	71517199	-	71511958	71517199	A3SS	0.5	50	50	ENSMUST00000114943.11	ENSMUSG00000060534.17	Dcc	chr18	protein_coding	deleted in colorectal carcinoma
chr18	73782033	73782797	-	73782124	73782797	A3SS	0.5	50	50	ENSMUST00000025393.14	ENSMUSG00000024515.14	Smad4	chr18	protein_coding	SMAD family member 4
chr18	73774992	73775599	-	73774992	73781956	A5SS	0.5	50	50	ENSMUST00000025393.14	ENSMUSG00000024515.14	Smad4	chr18	protein_coding	SMAD family member 4
chr18	73795938	73808090	-	73795938	73808232	A5SS	0.5	50	50	ENSMUST00000025393.14	ENSMUSG00000024515.14	Smad4	chr18	protein_coding	SMAD family member 4
chr18	73782033	73782934	-	73782033	73782797	5pMXE	0.5	50	50	ENSMUST00000147315.8	ENSMUSG00000024515.14	Smad4	chr18	protein_coding	SMAD family member 4
chr18	73931049	73938123	-	73931049;73934933	73934800;73938123	ES	0.5	50	50	ENSMUST00000025439.5	ENSMUSG00000024556.5	Me2	chr18	protein_coding	malic enzyme 2, NAD(+)-dependent, mitochondrial
chr18	73992527	73996991	+	73992527;73996345	73996240;73996991	ES	0.5	50	50	ENSMUST00000120033.8	ENSMUSG00000064036.16	Mro	chr18	protein_coding	maestro
chr18	74005135	74006295	+	74005135	74006292	A3SS	0.5	50	50	ENSMUST00000120033.8	ENSMUSG00000064036.16	Mro	chr18	protein_coding	maestro
chr18	73998322	74003025	+	73997133	74003025	A5SS	0.5	50	50	ENSMUST00000120033.8	ENSMUSG00000064036.16	Mro	chr18	protein_coding	maestro
chr18	74003118	74004989	+	74003118	74013916	A3SS	0.5	50	50	ENSMUST00000136473.8	ENSMUSG00000064036.16	Mro	chr18	protein_coding	maestro
chr18	74104347	74197893	-	74104347	74196995	5pMXE	0.25	50	50	ENSMUST00000162863.8	ENSMUSG00000024558.13	Mapk4	chr18	protein_coding	mitogen-activated protein kinase 4
chr18	74104347	74197911	-	74104347	74196995	5pMXE	0.25	50	50	ENSMUST00000162863.8	ENSMUSG00000024558.13	Mapk4	chr18	protein_coding	mitogen-activated protein kinase 4
chr18	74104347	74198112	-	74104347	74196995	5pMXE	0.25	50	50	ENSMUST00000162863.8	ENSMUSG00000024558.13	Mapk4	chr18	protein_coding	mitogen-activated protein kinase 4
chr18	74064165;74070345	74070201;74102962	-	74064165;74068238	74066968;74102962	MXE	0.5	100	100	ENSMUST00000162863.8	ENSMUSG00000024558.13	Mapk4	chr18	protein_coding	mitogen-activated protein kinase 4
chr18	74068238;74070345	74070201;74102962	-	74068238	74102962	cassetteExon	0.5	100	100	ENSMUST00000162863.8	ENSMUSG00000024558.13	Mapk4	chr18	protein_coding	mitogen-activated protein kinase 4
chr18	74104347	74198112	-	74104347	74197911	5pMXE	0.25	50	50	ENSMUST00000091851.10	ENSMUSG00000024558.13	Mapk4	chr18	protein_coding	mitogen-activated protein kinase 4
chr18	74104347	74197893	-	74104347	74197911	A5SS	0.25	50	50	ENSMUST00000091851.10	ENSMUSG00000024558.13	Mapk4	chr18	protein_coding	mitogen-activated protein kinase 4
chr18	74104347	74198112	-	74104347	74197893	5pMXE	0.25	50	50	ENSMUST00000159162.2	ENSMUSG00000024558.13	Mapk4	chr18	protein_coding	mitogen-activated protein kinase 4
chr18	74068238	74070201	-	74064165	74070201	A3SS	0.5	50	50	ENSMUST00000159162.2	ENSMUSG00000024558.13	Mapk4	chr18	protein_coding	mitogen-activated protein kinase 4
chr18	74068238	74102962	-	74070345	74102962	A3SS&ES	0.5	50	50	ENSMUST00000159162.2	ENSMUSG00000024558.13	Mapk4	chr18	protein_coding	mitogen-activated protein kinase 4
chr18	74064165	74066968	-	74064165	74070201	A5SS	0.5	50	50	ENSMUST00000159162.2	ENSMUSG00000024558.13	Mapk4	chr18	protein_coding	mitogen-activated protein kinase 4
chr18	74333108	74337335	-	74333108;74335758	74335661;74337335	ES	0.5	50	50	ENSMUST00000040188.16	ENSMUSG00000036223.17	Ska1	chr18	protein_coding	spindle and kinetochore associated complex subunit 1
chr18	74339955	74340665	-	74339955	74340601	A5SS	0.5	50	50	ENSMUST00000040188.16	ENSMUSG00000036223.17	Ska1	chr18	protein_coding	spindle and kinetochore associated complex subunit 1
chr18	74407844	74408219	+	74407844;74408108	74408034;74408219	ES	0.5	50	50	ENSMUST00000239157.2	ENSMUSG00000024561.12	Mbd1	chr18	protein_coding	methyl-CpG binding domain protein 1
chr18	74408488;74409142	74408975;74409478	+	74408488	74409478	cassetteExon	0.5	100	100	ENSMUST00000239157.2	ENSMUSG00000024561.12	Mbd1	chr18	protein_coding	methyl-CpG binding domain protein 1
chr18	74410649	74411750	+	74410649	74414950	A3SS	0.5	50	50	ENSMUST00000239157.2	ENSMUSG00000024561.12	Mbd1	chr18	protein_coding	methyl-CpG binding domain protein 1
chr18	74416337;74417843	74417612;74432183	+	74416337	74432183	cassetteExon	0.5	100	100	ENSMUST00000114895.4	ENSMUSG00000035394.12	Cfap53	chr18	protein_coding	cilia and flagella associated protein 53
chr18	74428222	74432183	+	74416337	74432183	A5SS	0.25	50	50	ENSMUST00000114895.4	ENSMUSG00000035394.12	Cfap53	chr18	protein_coding	cilia and flagella associated protein 53
chr18	74428795	74432183	+	74416337	74432183	A5SS	0.25	50	50	ENSMUST00000114895.4	ENSMUSG00000035394.12	Cfap53	chr18	protein_coding	cilia and flagella associated protein 53
chr18	74482210	74492594	+	74462573	74492594	A5SS	0.5	50	50	ENSMUST00000114895.4	ENSMUSG00000035394.12	Cfap53	chr18	protein_coding	cilia and flagella associated protein 53
chr18	74417843;74428222	74428029;74432183	+	74417843	74432183	cassetteExon	0.5	100	100	ENSMUST00000176435.8	ENSMUSG00000035394.12	Cfap53	chr18	protein_coding	cilia and flagella associated protein 53
chr18	74428795	74432183	+	74417843	74432183	A5SS	0.25	50	50	ENSMUST00000176435.8	ENSMUSG00000035394.12	Cfap53	chr18	protein_coding	cilia and flagella associated protein 53
chr18	74428222	74432183	+	74428222;74428795	74428664;74432183	ES	0.25	50	50	ENSMUST00000177101.8	ENSMUSG00000035394.12	Cfap53	chr18	protein_coding	cilia and flagella associated protein 53
chr18	74417843	74432183	+	74428222	74432183	5pMXE	0.25	50	50	ENSMUST00000176766.2	ENSMUSG00000035394.12	Cfap53	chr18	protein_coding	cilia and flagella associated protein 53
chr18	74574123	74644494	+	74574123	74702838	A3SS	0.5	50	50	ENSMUST00000125882.8	ENSMUSG00000025885.19	Myo5b	chr18	protein_coding	myosin VB
chr18	74575878	74702838	+	74574123	74702838	A5SS	0.5	50	50	ENSMUST00000125882.8	ENSMUSG00000025885.19	Myo5b	chr18	protein_coding	myosin VB
chr18	74856928;74862019	74861942;74864716	+	74856928	74864716	cassetteExon	0.5	100	100	ENSMUST00000074157.13	ENSMUSG00000025885.19	Myo5b	chr18	protein_coding	myosin VB
chr18	74787141	74790453	+	74787141	74794678	A3SS	0.5	50	50	ENSMUST00000074157.13	ENSMUSG00000025885.19	Myo5b	chr18	protein_coding	myosin VB
chr18	74766315	74767532	+	74760323	74767532	A5SS	0.5	50	50	ENSMUST00000074157.13	ENSMUSG00000025885.19	Myo5b	chr18	protein_coding	myosin VB
chr18	74840661	74840935	+	74834755	74840935	A5SS	0.5	50	50	ENSMUST00000074157.13	ENSMUSG00000025885.19	Myo5b	chr18	protein_coding	myosin VB
chr18	74848045	74849030	+	74848030	74849030	A5SS	0.33	50	50	ENSMUST00000074157.13	ENSMUSG00000025885.19	Myo5b	chr18	protein_coding	myosin VB
chr18	74848671	74849030	+	74848030	74849030	A5SS	0.33	50	50	ENSMUST00000074157.13	ENSMUSG00000025885.19	Myo5b	chr18	protein_coding	myosin VB
chr18	74848671	74849030	+	74848045	74849030	A5SS	0.33	50	50	ENSMUST00000177366.2	ENSMUSG00000025885.19	Myo5b	chr18	protein_coding	myosin VB
chr18	74658947;74662163	74662100;74664134	-	74658947	74664134	cassetteExon	0.5	100	100	ENSMUST00000152951.2	ENSMUSG00000086333.2	1700120E14Rik	chr18	lncRNA	RIKEN cDNA 1700120E14 gene
chr18	75138971	75141722	+	75139085	75141722	A5SS	0.33	50	50	ENSMUST00000040284.6	ENSMUSG00000036299.6	BC031181	chr18	protein_coding	cDNA sequence BC031181
chr18	75139185	75141722	+	75139085	75141722	A5SS	0.33	50	50	ENSMUST00000040284.6	ENSMUSG00000036299.6	BC031181	chr18	protein_coding	cDNA sequence BC031181
chr18	75139185	75141722	+	75138971	75141722	A5SS	0.33	50	50	ENSMUST00000236421.2	ENSMUSG00000036299.6	BC031181	chr18	protein_coding	cDNA sequence BC031181
chr18	75215578	75247861	+	75215578	75238938	3pMXE	0.33	50	50	ENSMUST00000236220.2	ENSMUSG00000035765.11	Dym	chr18	protein_coding	dymeclin
chr18	75215578	75218773	+	75215578	75238938	A3SS	0.33	50	50	ENSMUST00000236220.2	ENSMUSG00000035765.11	Dym	chr18	protein_coding	dymeclin
chr18	75181513	75186052	+	75176340	75186052	A5SS	0.5	50	50	ENSMUST00000236220.2	ENSMUSG00000035765.11	Dym	chr18	protein_coding	dymeclin
chr18	75215578	75218773	+	75215578	75247861	A3SS	0.33	50	50	ENSMUST00000039608.9	ENSMUSG00000035765.11	Dym	chr18	protein_coding	dymeclin
chr18	75259990	75283752	+	75259990	75332234	A3SS	0.5	50	50	ENSMUST00000039608.9	ENSMUSG00000035765.11	Dym	chr18	protein_coding	dymeclin
chr18	75429938	75430254	-	75422240	75430254	A3SS	0.5	50	50	ENSMUST00000190465.2	ENSMUSG00000102047.2	2010010A06Rik	chr18	transcribed_processed_pseudogene	RIKEN cDNA 2010010A06 gene
chr18	75504019	75526898	+	75504019;75509019	75508945;75526898	ES	0.5	50	50	ENSMUST00000026999.10	ENSMUSG00000025880.12	Smad7	chr18	protein_coding	SMAD family member 7
chr18	75503147	75503966	+	75502639	75503966	A5SS	0.5	50	50	ENSMUST00000026999.10	ENSMUSG00000025880.12	Smad7	chr18	protein_coding	SMAD family member 7
chr18	75508126	75508945	+	75504019	75508945	A5SS	0.5	50	50	ENSMUST00000026999.10	ENSMUSG00000025880.12	Smad7	chr18	protein_coding	SMAD family member 7
chr18	76192688	76269898	+	76144761	76269898	A5SS	0.5	50	50	ENSMUST00000058997.15	ENSMUSG00000044646.16	Zbtb7c	chr18	protein_coding	zinc finger and BTB domain containing 7C
chr18	76395798	76420999	+	76395798;76420020	76419931;76420999	ES	0.33	50	50	ENSMUST00000168423.9	ENSMUSG00000024563.17	Smad2	chr18	protein_coding	SMAD family member 2
chr18	76421192	76425981	+	76421192;76422244	76422110;76425981	ES	0.5	50	50	ENSMUST00000168423.9	ENSMUSG00000024563.17	Smad2	chr18	protein_coding	SMAD family member 2
chr18	76375303	76395511	+	76375050	76395511	A5SS	0.33	50	50	ENSMUST00000168423.9	ENSMUSG00000024563.17	Smad2	chr18	protein_coding	SMAD family member 2
chr18	76375303	76420999	+	76420020	76420999	A5SS&ES	0.33	50	50	ENSMUST00000168423.9	ENSMUSG00000024563.17	Smad2	chr18	protein_coding	SMAD family member 2
chr18	76394581	76395511	+	76375050	76395511	A5SS	0.33	50	50	ENSMUST00000168423.9	ENSMUSG00000024563.17	Smad2	chr18	protein_coding	SMAD family member 2
chr18	76375303	76420999	+	76395798	76420999	A5SS&ES	0.33	50	50	ENSMUST00000091831.13	ENSMUSG00000024563.17	Smad2	chr18	protein_coding	SMAD family member 2
chr18	76394581	76395511	+	76375303	76395511	A5SS	0.33	50	50	ENSMUST00000171256.8	ENSMUSG00000024563.17	Smad2	chr18	protein_coding	SMAD family member 2
chr18	76375303;76395798	76395511;76420999	+	76375303	76420999	cassetteExon	0.5	100	100	ENSMUST00000172198.8	ENSMUSG00000024563.17	Smad2	chr18	protein_coding	SMAD family member 2
chr18	77027365	77031739	+	77027365	77028209	3pMXE	0.5	50	50	ENSMUST00000026487.6	ENSMUSG00000090000.3	Ier3ip1	chr18	protein_coding	immediate early response 3 interacting protein 1
chr18	77017912;77018455	77018320;77027264	+	77017912	77027264	cassetteExon	0.5	100	100	ENSMUST00000026487.6	ENSMUSG00000090000.3	Ier3ip1	chr18	protein_coding	immediate early response 3 interacting protein 1
chr18	77031881;77038919	77038809;77042674	+	77031881;77042324	77042222;77042674	MXE	0.5	100	100	ENSMUST00000142456.2	ENSMUSG00000117732.2	Gm50364	chr18	protein_coding	predicted gene, 50364
chr18	77031881	77033039	+	77031881	77042222	A3SS	0.33	50	50	ENSMUST00000142456.2	ENSMUSG00000117732.2	Gm50364	chr18	protein_coding	predicted gene, 50364
chr18	77044619	77048510	+	77044619	77052747	A3SS	0.5	50	50	ENSMUST00000142456.2	ENSMUSG00000117732.2	Gm50364	chr18	protein_coding	predicted gene, 50364
chr18	77031881;77033053	77033039;77038809	+	77031881	77038809	cassetteExon	0.5	100	100	ENSMUST00000097522.11	ENSMUSG00000025421.16	Hdhd2	chr18	protein_coding	haloacid dehalogenase-like hydrolase domain containing 2
chr18	77032223	77038809	+	77031881	77038809	A5SS	0.25	50	50	ENSMUST00000097522.11	ENSMUSG00000025421.16	Hdhd2	chr18	protein_coding	haloacid dehalogenase-like hydrolase domain containing 2
chr18	77032227	77038809	+	77031881	77038809	A5SS	0.25	50	50	ENSMUST00000097522.11	ENSMUSG00000025421.16	Hdhd2	chr18	protein_coding	haloacid dehalogenase-like hydrolase domain containing 2
chr18	77031881;77042324	77042222;77042674	+	77031881;77038919	77033039;77042674	MXE	0.5	100	100	ENSMUST00000145634.9	ENSMUSG00000025421.16	Hdhd2	chr18	protein_coding	haloacid dehalogenase-like hydrolase domain containing 2
chr18	77032223	77033039	+	77031881	77033039	A5SS	0.5	50	50	ENSMUST00000145634.9	ENSMUSG00000025421.16	Hdhd2	chr18	protein_coding	haloacid dehalogenase-like hydrolase domain containing 2
chr18	77032223	77038809	+	77033053	77038809	A5SS&ES	0.25	50	50	ENSMUST00000145634.9	ENSMUSG00000025421.16	Hdhd2	chr18	protein_coding	haloacid dehalogenase-like hydrolase domain containing 2
chr18	77032227	77038809	+	77033053	77038809	A5SS&ES	0.25	50	50	ENSMUST00000145634.9	ENSMUSG00000025421.16	Hdhd2	chr18	protein_coding	haloacid dehalogenase-like hydrolase domain containing 2
chr18	77032223	77038809	+	77032223;77033053	77033039;77038809	ES	0.33	50	50	ENSMUST00000026485.15	ENSMUSG00000025421.16	Hdhd2	chr18	protein_coding	haloacid dehalogenase-like hydrolase domain containing 2
chr18	77042324	77042674	+	77038919	77042674	A5SS	0.5	50	50	ENSMUST00000026485.15	ENSMUSG00000025421.16	Hdhd2	chr18	protein_coding	haloacid dehalogenase-like hydrolase domain containing 2
chr18	77032223	77038809	+	77032227	77038809	A5SS	0.25	50	50	ENSMUST00000150990.9	ENSMUSG00000025421.16	Hdhd2	chr18	protein_coding	haloacid dehalogenase-like hydrolase domain containing 2
chr18	77090496	77095204	-	77090496;77092517	77092419;77095204	ES	0.5	50	50	ENSMUST00000126153.8	ENSMUSG00000025420.14	Katnal2	chr18	protein_coding	katanin p60 subunit A-like 2
chr18	77105323	77134870	-	77105323;77106951	77106881;77134870	ES	0.2	50	50	ENSMUST00000126153.8	ENSMUSG00000025420.14	Katnal2	chr18	protein_coding	katanin p60 subunit A-like 2
chr18	77106951;77132501	77132376;77134870	-	77106951	77134870	cassetteExon	0.5	100	100	ENSMUST00000126153.8	ENSMUSG00000025420.14	Katnal2	chr18	protein_coding	katanin p60 subunit A-like 2
chr18	77066368	77067695	-	77066228	77067695	A3SS	0.5	50	50	ENSMUST00000126153.8	ENSMUSG00000025420.14	Katnal2	chr18	protein_coding	katanin p60 subunit A-like 2
chr18	77081282	77082090	-	77067857	77082090	A3SS	0.5	50	50	ENSMUST00000126153.8	ENSMUSG00000025420.14	Katnal2	chr18	protein_coding	katanin p60 subunit A-like 2
chr18	77089556	77090127	-	77085386	77090127	A3SS	0.5	50	50	ENSMUST00000126153.8	ENSMUSG00000025420.14	Katnal2	chr18	protein_coding	katanin p60 subunit A-like 2
chr18	77082200	77085308	-	77082200	77085295	A5SS	0.5	50	50	ENSMUST00000126153.8	ENSMUSG00000025420.14	Katnal2	chr18	protein_coding	katanin p60 subunit A-like 2
chr18	77092517	77094497	-	77092517	77095204	A5SS	0.5	50	50	ENSMUST00000126153.8	ENSMUSG00000025420.14	Katnal2	chr18	protein_coding	katanin p60 subunit A-like 2
chr18	77098741	77099686	-	77098741	77099680	A5SS	0.33	50	50	ENSMUST00000126153.8	ENSMUSG00000025420.14	Katnal2	chr18	protein_coding	katanin p60 subunit A-like 2
chr18	77132501	77134870	-	77105323	77134870	A3SS	0.2	50	50	ENSMUST00000137498.8	ENSMUSG00000025420.14	Katnal2	chr18	protein_coding	katanin p60 subunit A-like 2
chr18	77098741	77134870	-	77098741;77099800	77099686;77134870	ES	0.2	50	50	ENSMUST00000137354.8	ENSMUSG00000025420.14	Katnal2	chr18	protein_coding	katanin p60 subunit A-like 2
chr18	77105323	77134870	-	77099800	77134870	A3SS	0.2	50	50	ENSMUST00000137354.8	ENSMUSG00000025420.14	Katnal2	chr18	protein_coding	katanin p60 subunit A-like 2
chr18	77106951	77134870	-	77099800	77134870	A3SS	0.2	50	50	ENSMUST00000137354.8	ENSMUSG00000025420.14	Katnal2	chr18	protein_coding	katanin p60 subunit A-like 2
chr18	77132501	77134870	-	77099800	77134870	A3SS	0.2	50	50	ENSMUST00000137354.8	ENSMUSG00000025420.14	Katnal2	chr18	protein_coding	katanin p60 subunit A-like 2
chr18	77099800	77103698	-	77099800	77134870	A5SS	0.5	50	50	ENSMUST00000137354.8	ENSMUSG00000025420.14	Katnal2	chr18	protein_coding	katanin p60 subunit A-like 2
chr18	77098741	77134870	-	77098741	77099686	5pMXE	0.33	50	50	ENSMUST00000125744.8	ENSMUSG00000025420.14	Katnal2	chr18	protein_coding	katanin p60 subunit A-like 2
chr18	77098741;77099800	77099680;77134870	-	77098741	77134870	cassetteExon	0.5	100	100	ENSMUST00000123650.2	ENSMUSG00000025420.14	Katnal2	chr18	protein_coding	katanin p60 subunit A-like 2
chr18	77105323	77134870	-	77098741	77134870	A3SS	0.2	50	50	ENSMUST00000123650.2	ENSMUSG00000025420.14	Katnal2	chr18	protein_coding	katanin p60 subunit A-like 2
chr18	77106951	77134870	-	77098741	77134870	A3SS	0.2	50	50	ENSMUST00000123650.2	ENSMUSG00000025420.14	Katnal2	chr18	protein_coding	katanin p60 subunit A-like 2
chr18	77132501	77134870	-	77098741	77134870	A3SS	0.2	50	50	ENSMUST00000123650.2	ENSMUSG00000025420.14	Katnal2	chr18	protein_coding	katanin p60 subunit A-like 2
chr18	77207842;77210766	77210693;77214553	+	77207842	77214553	cassetteExon	0.5	100	100	ENSMUST00000114777.10	ENSMUSG00000025423.17	Pias2	chr18	protein_coding	protein inhibitor of activated STAT 2
chr18	77232838	77234399	+	77232838	77237757	A3SS	0.5	50	50	ENSMUST00000114777.10	ENSMUSG00000025423.17	Pias2	chr18	protein_coding	protein inhibitor of activated STAT 2
chr18	77153603	77184945	+	77153115	77184945	A5SS	0.5	50	50	ENSMUST00000114777.10	ENSMUSG00000025423.17	Pias2	chr18	protein_coding	protein inhibitor of activated STAT 2
chr18	77273921	77320489	+	77273921;77299459	77299352;77320489	ES	0.5	50	50	ENSMUST00000075290.8	ENSMUSG00000025425.19	St8sia5	chr18	protein_coding	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
chr18	77492703	77496398	+	77492703;77493698	77493513;77496398	ES	0.5	50	50	ENSMUST00000096547.11	ENSMUSG00000032818.17	Loxhd1	chr18	protein_coding	lipoxygenase homology domains 1
chr18	77456979	77459653	+	77456979	77462761	A3SS	0.5	50	50	ENSMUST00000096547.11	ENSMUSG00000032818.17	Loxhd1	chr18	protein_coding	lipoxygenase homology domains 1
chr18	77469338	77469680	+	77469338	77471420	A3SS	0.5	50	50	ENSMUST00000096547.11	ENSMUSG00000032818.17	Loxhd1	chr18	protein_coding	lipoxygenase homology domains 1
chr18	77395791	77409269	+	77383613	77409269	A5SS	0.5	50	50	ENSMUST00000096547.11	ENSMUSG00000032818.17	Loxhd1	chr18	protein_coding	lipoxygenase homology domains 1
chr18	77460719	77462761	+	77456979	77462761	A5SS	0.5	50	50	ENSMUST00000096547.11	ENSMUSG00000032818.17	Loxhd1	chr18	protein_coding	lipoxygenase homology domains 1
chr18	77528701	77529085	+	77518921	77529085	A5SS	0.5	50	50	ENSMUST00000096547.11	ENSMUSG00000032818.17	Loxhd1	chr18	protein_coding	lipoxygenase homology domains 1
chr18	77554468	77555937	-	77554468;77554735	77554631;77555937	ES	0.5	50	50	ENSMUST00000026494.14	ENSMUSG00000025427.16	Rnf165	chr18	protein_coding	ring finger protein 165
chr18	77651146	77652738	-	77572160	77652738	A3SS	0.33	50	50	ENSMUST00000026494.14	ENSMUSG00000025427.16	Rnf165	chr18	protein_coding	ring finger protein 165
chr18	77572160	77592617	-	77572160	77652738	A5SS	0.5	50	50	ENSMUST00000026494.14	ENSMUSG00000025427.16	Rnf165	chr18	protein_coding	ring finger protein 165
chr18	77572160	77652738	-	77556066	77652738	A3SS	0.33	50	50	ENSMUST00000182024.2	ENSMUSG00000025427.16	Rnf165	chr18	protein_coding	ring finger protein 165
chr18	77651146	77652738	-	77556066	77652738	A3SS	0.33	50	50	ENSMUST00000182024.2	ENSMUSG00000025427.16	Rnf165	chr18	protein_coding	ring finger protein 165
chr18	77556066	77563170	-	77556066	77652738	A5SS	0.5	50	50	ENSMUST00000182024.2	ENSMUSG00000025427.16	Rnf165	chr18	protein_coding	ring finger protein 165
chr18	77554468	77555937	-	77554468	77554631	5pMXE	0.5	50	50	ENSMUST00000182805.2	ENSMUSG00000025427.16	Rnf165	chr18	protein_coding	ring finger protein 165
chr18	77762380	77802003	-	77762380	77801421	5pMXE	0.5	50	50	ENSMUST00000074653.6	ENSMUSG00000047466.11	8030462N17Rik	chr18	protein_coding	RIKEN cDNA 8030462N17 gene
chr18	77854738	77855420	-	77854738	77856044	A5SS	0.5	50	50	ENSMUST00000236234.2	ENSMUSG00000041840.9	Haus1	chr18	protein_coding	HAUS augmin-like complex, subunit 1
chr18	77862243	77863477	+	77861810	77863477	A5SS	0.5	50	50	ENSMUST00000026495.15	ENSMUSG00000025428.16	Atp5a1	chr18	protein_coding	ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1
chr18	77882450	77922825	+	77877686	77922825	A5SS	0.5	50	50	ENSMUST00000238172.2	ENSMUSG00000025429.10	Pstpip2	chr18	protein_coding	proline-serine-threonine phosphatase-interacting protein 2
chr18	77882647	77883143	-	77882647	77883100	A5SS	0.5	50	50	ENSMUST00000125396.2	ENSMUSG00000073529.10	F830208F22Rik	chr18	lncRNA	RIKEN cDNA F830208F22 gene
chr18	78005753	78008165	+	78005753	78008116	A3SS	0.5	50	50	ENSMUST00000044622.7	ENSMUSG00000039840.9	Epg5	chr18	protein_coding	ectopic P-granules autophagy protein 5 homolog (C. elegans)
chr18	77998513	77999122	+	77998055	77999122	A5SS	0.5	50	50	ENSMUST00000044622.7	ENSMUSG00000039840.9	Epg5	chr18	protein_coding	ectopic P-granules autophagy protein 5 homolog (C. elegans)
chr18	78159744	78185210	-	78159744	78166457	5pMXE	0.33	50	50	ENSMUST00000091813.12	ENSMUSG00000059336.15	Slc14a1	chr18	protein_coding	solute carrier family 14 (urea transporter), member 1
chr18	78159744;78163567	78163363;78166457	-	78159744	78166457	cassetteExon	0.5	100	100	ENSMUST00000091813.12	ENSMUSG00000059336.15	Slc14a1	chr18	protein_coding	solute carrier family 14 (urea transporter), member 1
chr18	78159744	78163363	-	78159744	78185210	A5SS	0.33	50	50	ENSMUST00000160639.2	ENSMUSG00000059336.15	Slc14a1	chr18	protein_coding	solute carrier family 14 (urea transporter), member 1
chr18	78206436	78226676	-	78206436	78221694	5pMXE	0.5	50	50	ENSMUST00000237290.2	ENSMUSG00000024552.17	Slc14a2	chr18	protein_coding	solute carrier family 14 (urea transporter), member 2
chr18	78249106	78249468	-	78249106	78250109	A5SS	0.5	50	50	ENSMUST00000237674.2	ENSMUSG00000024552.17	Slc14a2	chr18	protein_coding	solute carrier family 14 (urea transporter), member 2
chr18	78520493	78521104	+	78520493	78521914	A3SS	0.5	50	50	ENSMUST00000238077.2	ENSMUSG00000117661.2	4931439C15Rik	chr18	lncRNA	RIKEN cDNA 4931439C15 gene
chr18	80250558;80251444	80251325;80253277	+	80250558	80253277	cassetteExon	0.5	100	100	ENSMUST00000156400.9	ENSMUSG00000024571.16	Gm16286	chr18	protein_coding	predicted gene 16286
chr18	80250116	80250369	+	80250116	80250445	A3SS	0.5	50	50	ENSMUST00000156400.9	ENSMUSG00000024571.16	Gm16286	chr18	protein_coding	predicted gene 16286
chr18	80250161	80250369	+	80250116	80250369	A5SS	0.33	50	50	ENSMUST00000125127.8	ENSMUSG00000024571.16	Gm16286	chr18	protein_coding	predicted gene 16286
chr18	80250276	80250369	+	80250116	80250369	A5SS	0.33	50	50	ENSMUST00000125127.8	ENSMUSG00000024571.16	Gm16286	chr18	protein_coding	predicted gene 16286
chr18	80250558	80261919	+	80250558	80253277	3pMXE	0.33	50	50	ENSMUST00000145116.8	ENSMUSG00000024571.16	Gm16286	chr18	protein_coding	predicted gene 16286
chr18	80250276	80250369	+	80250161	80250369	A5SS	0.33	50	50	ENSMUST00000025463.14	ENSMUSG00000024571.16	Gm16286	chr18	protein_coding	predicted gene 16286
chr18	80250558	80251325	+	80250558	80261919	A3SS	0.33	50	50	ENSMUST00000145963.9	ENSMUSG00000057130.13	Txnl4a	chr18	protein_coding	thioredoxin-like 4A
chr18	80258791	80261919	+	80250558	80261919	A5SS	0.5	50	50	ENSMUST00000145963.9	ENSMUSG00000057130.13	Txnl4a	chr18	protein_coding	thioredoxin-like 4A
chr18	80296608	80298587	+	80296608;80297690	80297556;80298587	ES	0.5	50	50	ENSMUST00000131780.8	ENSMUSG00000034006.18	Slc66a2	chr18	protein_coding	solute carrier family 66 member 2
chr18	80306768	80326491	+	80306768;80315730	80315677;80326491	ES	0.5	50	50	ENSMUST00000131780.8	ENSMUSG00000034006.18	Slc66a2	chr18	protein_coding	solute carrier family 66 member 2
chr18	80326707	80326963	+	80326707	80334791	A3SS	0.5	50	50	ENSMUST00000131780.8	ENSMUSG00000034006.18	Slc66a2	chr18	protein_coding	solute carrier family 66 member 2
chr18	80299088	80299997	+	80298625	80299997	A5SS	0.25	50	50	ENSMUST00000131780.8	ENSMUSG00000034006.18	Slc66a2	chr18	protein_coding	solute carrier family 66 member 2
chr18	80299533	80299997	+	80298625	80299997	A5SS	0.25	50	50	ENSMUST00000131780.8	ENSMUSG00000034006.18	Slc66a2	chr18	protein_coding	solute carrier family 66 member 2
chr18	80299618	80299997	+	80298625	80299997	A5SS	0.25	50	50	ENSMUST00000131780.8	ENSMUSG00000034006.18	Slc66a2	chr18	protein_coding	solute carrier family 66 member 2
chr18	80306368	80306635	+	80300333	80306635	A5SS	0.5	50	50	ENSMUST00000131780.8	ENSMUSG00000034006.18	Slc66a2	chr18	protein_coding	solute carrier family 66 member 2
chr18	80299533	80299997	+	80299088	80299997	A5SS	0.25	50	50	ENSMUST00000144468.8	ENSMUSG00000034006.18	Slc66a2	chr18	protein_coding	solute carrier family 66 member 2
chr18	80299618	80299997	+	80299088	80299997	A5SS	0.25	50	50	ENSMUST00000144468.8	ENSMUSG00000034006.18	Slc66a2	chr18	protein_coding	solute carrier family 66 member 2
chr18	80299618	80299997	+	80299533	80299997	A5SS	0.25	50	50	ENSMUST00000129043.8	ENSMUSG00000034006.18	Slc66a2	chr18	protein_coding	solute carrier family 66 member 2
chr18	80306768	80326491	+	80306768	80315677	3pMXE	0.5	50	50	ENSMUST00000151677.9	ENSMUSG00000034006.18	Slc66a2	chr18	protein_coding	solute carrier family 66 member 2
chr18	80366385	80406428	-	80366385	80383656	A5SS&ES	0.33	50	50	ENSMUST00000077962.8	ENSMUSG00000059852.8	Kcng2	chr18	protein_coding	potassium voltage-gated channel, subfamily G, member 2
chr18	80366385	80406814	-	80366385	80383656	A5SS&ES	0.33	50	50	ENSMUST00000077962.8	ENSMUSG00000059852.8	Kcng2	chr18	protein_coding	potassium voltage-gated channel, subfamily G, member 2
chr18	80366385	80406814	-	80366385	80406428	5pMXE	0.33	50	50	ENSMUST00000184574.2	ENSMUSG00000059852.8	Kcng2	chr18	protein_coding	potassium voltage-gated channel, subfamily G, member 2
chr18	80477543	80483838	-	80477543	80489101	A5SS	0.33	50	50	ENSMUST00000036229.13	ENSMUSG00000033323.15	Ctdp1	chr18	protein_coding	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1
chr18	80477543	80484044	-	80477543	80489101	A5SS	0.33	50	50	ENSMUST00000036229.13	ENSMUSG00000033323.15	Ctdp1	chr18	protein_coding	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1
chr18	80477543	80484044	-	80477543	80483838	5pMXE	0.33	50	50	ENSMUST00000160434.3	ENSMUSG00000033323.15	Ctdp1	chr18	protein_coding	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1
chr18	80741871	80755855	-	80741871	80751249	5pMXE	0.5	50	50	ENSMUST00000236310.2	ENSMUSG00000033016.17	Nfatc1	chr18	protein_coding	nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1
chr18	80651240	80652155	-	80651240	80678906	A5SS	0.33	50	50	ENSMUST00000236310.2	ENSMUSG00000033016.17	Nfatc1	chr18	protein_coding	nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1
chr18	80651240	80678617	-	80651240	80678906	A5SS	0.33	50	50	ENSMUST00000236310.2	ENSMUSG00000033016.17	Nfatc1	chr18	protein_coding	nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1
chr18	80651240	80652155	-	80651240	80678617	A5SS	0.33	50	50	ENSMUST00000167977.8	ENSMUSG00000033016.17	Nfatc1	chr18	protein_coding	nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1
chr18	80779364	80781868	-	80779364;80780059	80780027;80781868	ES	0.5	50	50	ENSMUST00000091790.5	ENSMUSG00000024566.11	Atp9b	chr18	protein_coding	ATPase, class II, type 9B
chr18	80838647	80879570	-	80838647;80851987	80851827;80879570	ES	0.5	50	50	ENSMUST00000091790.5	ENSMUSG00000024566.11	Atp9b	chr18	protein_coding	ATPase, class II, type 9B
chr18	80851987	80887742	-	80851987;80879646	80879570;80887742	ES	0.5	50	50	ENSMUST00000091790.5	ENSMUSG00000024566.11	Atp9b	chr18	protein_coding	ATPase, class II, type 9B
chr18	80920588	80952807	-	80920588;80935138	80935030;80952807	ES	0.5	50	50	ENSMUST00000091790.5	ENSMUSG00000024566.11	Atp9b	chr18	protein_coding	ATPase, class II, type 9B
chr18	80781996	80782962	-	80782071	80782962	A3SS	0.5	50	50	ENSMUST00000091790.5	ENSMUSG00000024566.11	Atp9b	chr18	protein_coding	ATPase, class II, type 9B
chr18	80797617	80799669	-	80797604	80799669	A3SS	0.5	50	50	ENSMUST00000091790.5	ENSMUSG00000024566.11	Atp9b	chr18	protein_coding	ATPase, class II, type 9B
chr18	80783019	80786109	-	80783019	80793034	A5SS	0.5	50	50	ENSMUST00000091790.5	ENSMUSG00000024566.11	Atp9b	chr18	protein_coding	ATPase, class II, type 9B
chr18	80838647;80879646	80879570;80887742	-	80838647;80851987	80851827;80887742	MXE	0.5	100	100	ENSMUST00000225235.2	ENSMUSG00000024566.11	Atp9b	chr18	protein_coding	ATPase, class II, type 9B
chr18	80779364	80781868	-	80780059	80781868	3pMXE	0.5	50	50	ENSMUST00000225218.2	ENSMUSG00000024566.11	Atp9b	chr18	protein_coding	ATPase, class II, type 9B
chr18	80961093	80977039	-	80838647	80977039	A3SS	0.5	50	50	ENSMUST00000226064.2	ENSMUSG00000024566.11	Atp9b	chr18	protein_coding	ATPase, class II, type 9B
chr18	80838647	80851827	-	80838647	80977039	A5SS	0.33	50	50	ENSMUST00000226064.2	ENSMUSG00000024566.11	Atp9b	chr18	protein_coding	ATPase, class II, type 9B
chr18	80838647	80879570	-	80838647	80977039	A5SS	0.33	50	50	ENSMUST00000226064.2	ENSMUSG00000024566.11	Atp9b	chr18	protein_coding	ATPase, class II, type 9B
chr18	80838647	80879570	-	80851987	80879570	3pMXE	0.5	50	50	ENSMUST00000224709.2	ENSMUSG00000024566.11	Atp9b	chr18	protein_coding	ATPase, class II, type 9B
chr18	80920588	80952807	-	80935138	80952807	3pMXE	0.5	50	50	ENSMUST00000235385.2	ENSMUSG00000024566.11	Atp9b	chr18	protein_coding	ATPase, class II, type 9B
chr18	81478388;81479492	81479401;81496650	-	81478388;81494369	81494209;81496650	MXE	0.5	100	100	ENSMUST00000235899.2	ENSMUSG00000118227.2	Gm30288	chr18	lncRNA	predicted gene, 30288
chr18	81524498	81526601	+	81524097	81526601	A5SS	0.5	50	50	ENSMUST00000236629.2	ENSMUSG00000118300.2	Gm50412	chr18	lncRNA	predicted gene, 50412
chr18	81678573	81680533	-	81678573	81680754	A5SS	0.5	50	50	ENSMUST00000235510.2	ENSMUSG00000117870.2	Gm41792	chr18	lncRNA	predicted gene, 41792
chr18	82540262	82590950	+	82540262	82572445	3pMXE	0.5	50	50	ENSMUST00000091789.11	ENSMUSG00000041607.18	Mbp	chr18	protein_coding	myelin basic protein
chr18	82518927	82531108	+	82518927	82540175	A3SS	0.5	50	50	ENSMUST00000091789.11	ENSMUSG00000041607.18	Mbp	chr18	protein_coding	myelin basic protein
chr18	82540262	82590950	+	82540262;82572875	82572445;82590950	ES	0.25	50	50	ENSMUST00000047865.14	ENSMUSG00000041607.18	Mbp	chr18	protein_coding	myelin basic protein
chr18	82572875;82579980	82579903;82590950	+	82572875	82590950	cassetteExon	0.5	100	100	ENSMUST00000047865.14	ENSMUSG00000041607.18	Mbp	chr18	protein_coding	myelin basic protein
chr18	82593332;82593758	82593660;82602237	+	82593332	82602237	cassetteExon	0.5	100	100	ENSMUST00000047865.14	ENSMUSG00000041607.18	Mbp	chr18	protein_coding	myelin basic protein
chr18	82593332;82593758	82593726;82602237	+	82593332	82602237	cassetteExon	0.5	100	100	ENSMUST00000047865.14	ENSMUSG00000041607.18	Mbp	chr18	protein_coding	myelin basic protein
chr18	82593332;82597183	82597061;82602237	+	82593332	82602237	cassetteExon	0.5	100	100	ENSMUST00000047865.14	ENSMUSG00000041607.18	Mbp	chr18	protein_coding	myelin basic protein
chr18	82583015	82590950	+	82572875	82590950	A5SS	0.25	50	50	ENSMUST00000047865.14	ENSMUSG00000041607.18	Mbp	chr18	protein_coding	myelin basic protein
chr18	82579980	82590950	+	82540262	82590950	A5SS	0.25	50	50	ENSMUST00000143506.8	ENSMUSG00000041607.18	Mbp	chr18	protein_coding	myelin basic protein
chr18	82583015	82590950	+	82540262	82590950	A5SS	0.25	50	50	ENSMUST00000143506.8	ENSMUSG00000041607.18	Mbp	chr18	protein_coding	myelin basic protein
chr18	82593332;82597183	82597061;82602237	+	82593332;82593758	82593726;82602237	MXE	0.5	100	100	ENSMUST00000152071.9	ENSMUSG00000041607.18	Mbp	chr18	protein_coding	myelin basic protein
chr18	82593758;82597183	82597061;82602237	+	82593758	82602237	cassetteExon	0.5	100	100	ENSMUST00000152071.9	ENSMUSG00000041607.18	Mbp	chr18	protein_coding	myelin basic protein
chr18	82593332	82593660	+	82593332	82593726	A3SS	0.25	50	50	ENSMUST00000152071.9	ENSMUSG00000041607.18	Mbp	chr18	protein_coding	myelin basic protein
chr18	82583015	82590950	+	82579980	82590950	A5SS	0.33	50	50	ENSMUST00000152071.9	ENSMUSG00000041607.18	Mbp	chr18	protein_coding	myelin basic protein
chr18	82540262	82590950	+	82572875	82590950	5pMXE	0.25	50	50	ENSMUST00000142850.9	ENSMUSG00000041607.18	Mbp	chr18	protein_coding	myelin basic protein
chr18	82593332	82597061	+	82593332;82593758	82593726;82597061	ES	0.5	50	50	ENSMUST00000142850.9	ENSMUSG00000041607.18	Mbp	chr18	protein_coding	myelin basic protein
chr18	82593332;82597183	82597061;82602237	+	82593332;82593758	82593660;82602237	MXE	0.5	100	100	ENSMUST00000080658.12	ENSMUSG00000041607.18	Mbp	chr18	protein_coding	myelin basic protein
chr18	82593332;82593758	82593660;82597061	+	82593332	82597061	cassetteExon	0.5	100	100	ENSMUST00000153478.9	ENSMUSG00000041607.18	Mbp	chr18	protein_coding	myelin basic protein
chr18	82627600;82628811	82628730;82635835	-	82627600	82635835	cassetteExon	0.5	100	100	ENSMUST00000171071.9	ENSMUSG00000041258.19	Zfp236	chr18	protein_coding	zinc finger protein 236
chr18	82664366;82667515	82667405;82675074	-	82664366	82675074	cassetteExon	0.5	100	100	ENSMUST00000171071.9	ENSMUSG00000041258.19	Zfp236	chr18	protein_coding	zinc finger protein 236
chr18	82676331;82683106	82682963;82686697	-	82676331	82686697	cassetteExon	0.5	100	100	ENSMUST00000171071.9	ENSMUSG00000041258.19	Zfp236	chr18	protein_coding	zinc finger protein 236
chr18	82675265	82676128	-	82675302	82676128	A3SS	0.5	50	50	ENSMUST00000171071.9	ENSMUSG00000041258.19	Zfp236	chr18	protein_coding	zinc finger protein 236
chr18	82700412	82701689	-	82700412	82710768	A5SS	0.33	50	50	ENSMUST00000171071.9	ENSMUSG00000041258.19	Zfp236	chr18	protein_coding	zinc finger protein 236
chr18	82700412	82709703	-	82700412	82710768	A5SS	0.33	50	50	ENSMUST00000171071.9	ENSMUSG00000041258.19	Zfp236	chr18	protein_coding	zinc finger protein 236
chr18	82700412	82701689	-	82700412	82709703	A5SS	0.33	50	50	ENSMUST00000182866.3	ENSMUSG00000041258.19	Zfp236	chr18	protein_coding	zinc finger protein 236
chr18	82736541	82738155	+	82736541	82738169	A3SS	0.33	50	50	ENSMUST00000235424.2	ENSMUSG00000117888.2	Gm50351	chr18	lncRNA	predicted gene, 50351
chr18	82736541	82738185	+	82736541	82738169	A3SS	0.33	50	50	ENSMUST00000235424.2	ENSMUSG00000117888.2	Gm50351	chr18	lncRNA	predicted gene, 50351
chr18	82736541	82738155	+	82736541	82738185	A3SS	0.33	50	50	ENSMUST00000235835.2	ENSMUSG00000117888.2	Gm50351	chr18	lncRNA	predicted gene, 50351
chr18	82874255	82874428	+	82874255	82887934	A3SS	0.5	50	50	ENSMUST00000181345.2	ENSMUSG00000097738.3	4930445N18Rik	chr18	lncRNA	RIKEN cDNA 4930445N18 gene
chr18	82929117	83004869	+	82929117	82973649	3pMXE	0.5	50	50	ENSMUST00000235793.2	ENSMUSG00000058881.14	Zfp516	chr18	protein_coding	zinc finger protein 516
chr18	82932848	82973649	+	82929117	82973649	A5SS	0.33	50	50	ENSMUST00000235793.2	ENSMUSG00000058881.14	Zfp516	chr18	protein_coding	zinc finger protein 516
chr18	82936011	82973649	+	82929117	82973649	A5SS	0.33	50	50	ENSMUST00000235793.2	ENSMUSG00000058881.14	Zfp516	chr18	protein_coding	zinc finger protein 516
chr18	82929117	83004869	+	82929117;82975574	82973649;83004869	ES	0.33	50	50	ENSMUST00000171238.8	ENSMUSG00000058881.14	Zfp516	chr18	protein_coding	zinc finger protein 516
chr18	83011314	83019398	+	83011314;83012662	83012595;83019398	ES	0.5	50	50	ENSMUST00000171238.8	ENSMUSG00000058881.14	Zfp516	chr18	protein_coding	zinc finger protein 516
chr18	83006323	83011210	+	83006323	83011195	A3SS	0.5	50	50	ENSMUST00000171238.8	ENSMUSG00000058881.14	Zfp516	chr18	protein_coding	zinc finger protein 516
chr18	82929565	83004869	+	82975574	83004869	A5SS&ES	0.33	50	50	ENSMUST00000171238.8	ENSMUSG00000058881.14	Zfp516	chr18	protein_coding	zinc finger protein 516
chr18	82929565	83004869	+	82929117	83004869	A5SS	0.33	50	50	ENSMUST00000236858.2	ENSMUSG00000058881.14	Zfp516	chr18	protein_coding	zinc finger protein 516
chr18	82975574	83004869	+	82929117	83004869	A5SS	0.33	50	50	ENSMUST00000236858.2	ENSMUSG00000058881.14	Zfp516	chr18	protein_coding	zinc finger protein 516
chr18	82936011	82973649	+	82932848	82973649	A5SS	0.33	50	50	ENSMUST00000071233.7	ENSMUSG00000058881.14	Zfp516	chr18	protein_coding	zinc finger protein 516
chr18	83045296	83048963	+	83031274	83048963	A5SS	0.5	50	50	ENSMUST00000236735.2	ENSMUSG00000118094.2	Gm52988	chr18	lncRNA	predicted gene, 52988
chr18	83071148	83081475	+	83071148	83091231	A3SS	0.5	50	50	ENSMUST00000236753.2	ENSMUSG00000118094.2	Gm52988	chr18	lncRNA	predicted gene, 52988
chr18	83064823	83070958	+	83066768	83070958	A5SS&ES	0.5	50	50	ENSMUST00000236753.2	ENSMUSG00000118094.2	Gm52988	chr18	lncRNA	predicted gene, 52988
chr18	83094401;83113991	83113557;83125710	-	83094401	83125710	cassetteExon	0.5	100	100	ENSMUST00000235874.2	ENSMUSG00000100430.3	1700095A13Rik	chr18	lncRNA	RIKEN cDNA 1700095A13 gene
chr18	83117043	83125710	-	83094401	83125710	A3SS	0.2	50	50	ENSMUST00000235874.2	ENSMUSG00000100430.3	1700095A13Rik	chr18	lncRNA	RIKEN cDNA 1700095A13 gene
chr18	83125087	83125710	-	83094401	83125710	A3SS	0.2	50	50	ENSMUST00000235874.2	ENSMUSG00000100430.3	1700095A13Rik	chr18	lncRNA	RIKEN cDNA 1700095A13 gene
chr18	83125581	83125710	-	83094401	83125710	A3SS	0.2	50	50	ENSMUST00000235874.2	ENSMUSG00000100430.3	1700095A13Rik	chr18	lncRNA	RIKEN cDNA 1700095A13 gene
chr18	83094401	83097736	-	83094401	83125710	A5SS	0.33	50	50	ENSMUST00000235874.2	ENSMUSG00000100430.3	1700095A13Rik	chr18	lncRNA	RIKEN cDNA 1700095A13 gene
chr18	83094401	83113557	-	83094401	83097736	5pMXE	0.33	50	50	ENSMUST00000237353.2	ENSMUSG00000100430.3	1700095A13Rik	chr18	lncRNA	RIKEN cDNA 1700095A13 gene
chr18	83112761	83113557	-	83094401	83113557	A3SS	0.5	50	50	ENSMUST00000238160.2	ENSMUSG00000100430.3	1700095A13Rik	chr18	lncRNA	RIKEN cDNA 1700095A13 gene
chr18	83117043	83125710	-	83113991	83125710	A3SS	0.2	50	50	ENSMUST00000238160.2	ENSMUSG00000100430.3	1700095A13Rik	chr18	lncRNA	RIKEN cDNA 1700095A13 gene
chr18	83125087	83125710	-	83113991	83125710	A3SS	0.2	50	50	ENSMUST00000238160.2	ENSMUSG00000100430.3	1700095A13Rik	chr18	lncRNA	RIKEN cDNA 1700095A13 gene
chr18	83125581	83125710	-	83113991	83125710	A3SS	0.2	50	50	ENSMUST00000238160.2	ENSMUSG00000100430.3	1700095A13Rik	chr18	lncRNA	RIKEN cDNA 1700095A13 gene
chr18	83125087	83125710	-	83117043	83125710	A3SS	0.2	50	50	ENSMUST00000235826.2	ENSMUSG00000100430.3	1700095A13Rik	chr18	lncRNA	RIKEN cDNA 1700095A13 gene
chr18	83125581	83125710	-	83117043	83125710	A3SS	0.2	50	50	ENSMUST00000235826.2	ENSMUSG00000100430.3	1700095A13Rik	chr18	lncRNA	RIKEN cDNA 1700095A13 gene
chr18	83125581	83125710	-	83125087	83125710	A3SS	0.2	50	50	ENSMUST00000185460.2	ENSMUSG00000100430.3	1700095A13Rik	chr18	lncRNA	RIKEN cDNA 1700095A13 gene
chr18	83319460	83320516	-	83319460	83343946	A5SS	0.5	50	50	ENSMUST00000236997.2	ENSMUSG00000118333.2	4921531P14Rik	chr18	lncRNA	RIKEN cDNA 4921531P14 gene
chr18	83620054	83620585	-	83620054	83620781	A5SS	0.5	50	50	ENSMUST00000237771.2	ENSMUSG00000117658.2	Gm50417	chr18	lncRNA	predicted gene, 50417
chr18	83652708;83653423	83653219;83655003	-	83652708	83655003	cassetteExon	0.5	100	100	ENSMUST00000237151.2	ENSMUSG00000118200.2	Gm31621	chr18	lncRNA	predicted gene, 31621
chr18	83654433	83655003	-	83652708	83655003	A3SS	0.33	50	50	ENSMUST00000237151.2	ENSMUSG00000118200.2	Gm31621	chr18	lncRNA	predicted gene, 31621
chr18	83655115	83655805	-	83655532	83655805	A3SS	0.5	50	50	ENSMUST00000237151.2	ENSMUSG00000118200.2	Gm31621	chr18	lncRNA	predicted gene, 31621
chr18	83652708	83654999	-	83652708	83655003	A5SS	0.33	50	50	ENSMUST00000237151.2	ENSMUSG00000118200.2	Gm31621	chr18	lncRNA	predicted gene, 31621
chr18	83654433	83655003	-	83653423	83655003	A3SS	0.33	50	50	ENSMUST00000236855.2	ENSMUSG00000118200.2	Gm31621	chr18	lncRNA	predicted gene, 31621
chr18	83652708	83654999	-	83652708	83653219	A5SS&ES	0.33	50	50	ENSMUST00000236855.2	ENSMUSG00000118200.2	Gm31621	chr18	lncRNA	predicted gene, 31621
chr18	84034366	84105743	-	84034366	84103489	5pMXE	0.25	50	50	ENSMUST00000060303.10	ENSMUSG00000046982.12	Tshz1	chr18	protein_coding	teashirt zinc finger family member 1
chr18	84034366	84103145	-	84034366	84103489	A5SS	0.25	50	50	ENSMUST00000060303.10	ENSMUSG00000046982.12	Tshz1	chr18	protein_coding	teashirt zinc finger family member 1
chr18	84034366	84104140	-	84034366	84103489	A5SS	0.25	50	50	ENSMUST00000060303.10	ENSMUSG00000046982.12	Tshz1	chr18	protein_coding	teashirt zinc finger family member 1
chr18	84034366	84105743	-	84034366	84104140	5pMXE	0.25	50	50	ENSMUST00000175783.3	ENSMUSG00000046982.12	Tshz1	chr18	protein_coding	teashirt zinc finger family member 1
chr18	84034366	84103145	-	84034366	84104140	A5SS	0.25	50	50	ENSMUST00000175783.3	ENSMUSG00000046982.12	Tshz1	chr18	protein_coding	teashirt zinc finger family member 1
chr18	84034366	84105743	-	84034366	84103145	5pMXE	0.25	50	50	ENSMUST00000235188.2	ENSMUSG00000046982.12	Tshz1	chr18	protein_coding	teashirt zinc finger family member 1
chr18	84106905	84112535	+	84106498	84112535	A5SS	0.5	50	50	ENSMUST00000060223.4	ENSMUSG00000049090.4	Zadh2	chr18	protein_coding	zinc binding alcohol dehydrogenase, domain containing 2
chr18	84571109	84607563	-	84571109	84576452	5pMXE	0.5	50	50	ENSMUST00000125450.9	ENSMUSG00000048410.18	Zfp407	chr18	protein_coding	zinc finger protein 407
chr18	84450559	84570995	-	84146478	84570995	A3SS	0.33	50	50	ENSMUST00000125450.9	ENSMUSG00000048410.18	Zfp407	chr18	protein_coding	zinc finger protein 407
chr18	84514164	84570995	-	84146478	84570995	A3SS	0.33	50	50	ENSMUST00000125450.9	ENSMUSG00000048410.18	Zfp407	chr18	protein_coding	zinc finger protein 407
chr18	84571109	84607563	-	84571109;84581171	84576452;84607563	ES	0.5	50	50	ENSMUST00000125763.3	ENSMUSG00000048410.18	Zfp407	chr18	protein_coding	zinc finger protein 407
chr18	84299390	84333931	-	84228206	84333931	A3SS	0.5	50	50	ENSMUST00000125763.3	ENSMUSG00000048410.18	Zfp407	chr18	protein_coding	zinc finger protein 407
chr18	84514164	84570995	-	84450559	84570995	A3SS	0.5	50	50	ENSMUST00000125763.3	ENSMUSG00000048410.18	Zfp407	chr18	protein_coding	zinc finger protein 407
chr18	84372816	84430417	-	84372816	84450485	A5SS	0.5	50	50	ENSMUST00000125763.3	ENSMUSG00000048410.18	Zfp407	chr18	protein_coding	zinc finger protein 407
chr18	84581171	84607563	-	84571109	84607563	A3SS	0.5	50	50	ENSMUST00000182297.2	ENSMUSG00000048410.18	Zfp407	chr18	protein_coding	zinc finger protein 407
chr18	84647005;84649678	84649590;84650011	-	84647005	84650011	cassetteExon	0.5	100	100	ENSMUST00000070139.9	ENSMUSG00000056162.15	Cndp1	chr18	protein_coding	carnosine dipeptidase 1 (metallopeptidase M20 family)
chr18	84658480;84664971	84664763;84668027	-	84658480	84668027	cassetteExon	0.5	100	100	ENSMUST00000070139.9	ENSMUSG00000056162.15	Cndp1	chr18	protein_coding	carnosine dipeptidase 1 (metallopeptidase M20 family)
chr18	84658480	84665737	-	84658480	84668027	A5SS	0.33	50	50	ENSMUST00000070139.9	ENSMUSG00000056162.15	Cndp1	chr18	protein_coding	carnosine dipeptidase 1 (metallopeptidase M20 family)
chr18	84658480	84665737	-	84658480	84664763	A5SS&ES	0.33	50	50	ENSMUST00000236723.2	ENSMUSG00000056162.15	Cndp1	chr18	protein_coding	carnosine dipeptidase 1 (metallopeptidase M20 family)
chr18	84693302	84694709	-	84693302	84695444	A5SS	0.5	50	50	ENSMUST00000025546.17	ENSMUSG00000024644.18	Cndp2	chr18	protein_coding	CNDP dipeptidase 2 (metallopeptidase M20 family)
chr18	84696995	84698694	-	84696995	84699060	A5SS	0.33	50	50	ENSMUST00000025546.17	ENSMUSG00000024644.18	Cndp2	chr18	protein_coding	CNDP dipeptidase 2 (metallopeptidase M20 family)
chr18	84696995	84698915	-	84696995	84699060	A5SS	0.33	50	50	ENSMUST00000025546.17	ENSMUSG00000024644.18	Cndp2	chr18	protein_coding	CNDP dipeptidase 2 (metallopeptidase M20 family)
chr18	84700052	84702477	-	84700052	84703728	A5SS	0.33	50	50	ENSMUST00000025546.17	ENSMUSG00000024644.18	Cndp2	chr18	protein_coding	CNDP dipeptidase 2 (metallopeptidase M20 family)
chr18	84700052	84702588	-	84700052	84703728	A5SS	0.33	50	50	ENSMUST00000025546.17	ENSMUSG00000024644.18	Cndp2	chr18	protein_coding	CNDP dipeptidase 2 (metallopeptidase M20 family)
chr18	84696995	84698915	-	84696995	84698694	5pMXE	0.33	50	50	ENSMUST00000236415.2	ENSMUSG00000024644.18	Cndp2	chr18	protein_coding	CNDP dipeptidase 2 (metallopeptidase M20 family)
chr18	84700052	84702477	-	84700052	84702588	A5SS	0.33	50	50	ENSMUST00000236125.2	ENSMUSG00000024644.18	Cndp2	chr18	protein_coding	CNDP dipeptidase 2 (metallopeptidase M20 family)
chr18	84738486;84742720	84742581;84748155	+	84738486	84748155	cassetteExon	0.5	100	100	ENSMUST00000161429.3	ENSMUSG00000047992.12	Dipk1c	chr18	protein_coding	divergent protein kinase domain 1C
chr18	84738486;84742720	84742581;84754937	+	84738486;84748814	84748155;84754937	MXE	0.5	100	100	ENSMUST00000161429.3	ENSMUSG00000047992.12	Dipk1c	chr18	protein_coding	divergent protein kinase domain 1C
chr18	84742720	84754937	+	84742720;84748814	84748155;84754937	ES	0.5	50	50	ENSMUST00000052501.8	ENSMUSG00000047992.12	Dipk1c	chr18	protein_coding	divergent protein kinase domain 1C
chr18	84739211	84742581	+	84738486	84742581	A5SS	0.33	50	50	ENSMUST00000052501.8	ENSMUSG00000047992.12	Dipk1c	chr18	protein_coding	divergent protein kinase domain 1C
chr18	84742261	84742581	+	84738486	84742581	A5SS	0.33	50	50	ENSMUST00000052501.8	ENSMUSG00000047992.12	Dipk1c	chr18	protein_coding	divergent protein kinase domain 1C
chr18	84742720	84754937	+	84742720	84748155	3pMXE	0.5	50	50	ENSMUST00000237435.2	ENSMUSG00000047992.12	Dipk1c	chr18	protein_coding	divergent protein kinase domain 1C
chr18	84738486	84748155	+	84738486	84742581	A3SS&ES	0.5	50	50	ENSMUST00000159800.8	ENSMUSG00000047992.12	Dipk1c	chr18	protein_coding	divergent protein kinase domain 1C
chr18	84748814	84754937	+	84742720	84754937	A5SS	0.5	50	50	ENSMUST00000159800.8	ENSMUSG00000047992.12	Dipk1c	chr18	protein_coding	divergent protein kinase domain 1C
chr18	84739211	84742581	+	84739211;84742261	84742180;84742581	ES	0.5	50	50	ENSMUST00000161033.2	ENSMUSG00000047992.12	Dipk1c	chr18	protein_coding	divergent protein kinase domain 1C
chr18	84891294;84894977	84894959;84895952	+	84891294	84895952	cassetteExon	0.5	100	100	ENSMUST00000235725.2	ENSMUSG00000024646.15	Cyb5a	chr18	protein_coding	cytochrome b5 type A (microsomal)
chr18	84869732	84889630	+	84858339	84889630	A5SS	0.2	50	50	ENSMUST00000235725.2	ENSMUSG00000024646.15	Cyb5a	chr18	protein_coding	cytochrome b5 type A (microsomal)
chr18	84870125	84889630	+	84858339	84889630	A5SS	0.2	50	50	ENSMUST00000235725.2	ENSMUSG00000024646.15	Cyb5a	chr18	protein_coding	cytochrome b5 type A (microsomal)
chr18	84887314	84889630	+	84858339	84889630	A5SS	0.2	50	50	ENSMUST00000235725.2	ENSMUSG00000024646.15	Cyb5a	chr18	protein_coding	cytochrome b5 type A (microsomal)
chr18	84887841	84889630	+	84858339	84889630	A5SS	0.2	50	50	ENSMUST00000235725.2	ENSMUSG00000024646.15	Cyb5a	chr18	protein_coding	cytochrome b5 type A (microsomal)
chr18	84869732;84887841	84887592;84889630	+	84869732	84889630	cassetteExon	0.5	100	100	ENSMUST00000160180.9	ENSMUSG00000024646.15	Cyb5a	chr18	protein_coding	cytochrome b5 type A (microsomal)
chr18	84870125	84889630	+	84869732	84889630	A5SS	0.2	50	50	ENSMUST00000160180.9	ENSMUSG00000024646.15	Cyb5a	chr18	protein_coding	cytochrome b5 type A (microsomal)
chr18	84887314	84889630	+	84869732	84889630	A5SS	0.2	50	50	ENSMUST00000160180.9	ENSMUSG00000024646.15	Cyb5a	chr18	protein_coding	cytochrome b5 type A (microsomal)
chr18	84870125	84889630	+	84887841	84889630	A5SS&ES	0.25	50	50	ENSMUST00000236742.2	ENSMUSG00000024646.15	Cyb5a	chr18	protein_coding	cytochrome b5 type A (microsomal)
chr18	84887314	84889630	+	84887841	84889630	A5SS&ES	0.25	50	50	ENSMUST00000236742.2	ENSMUSG00000024646.15	Cyb5a	chr18	protein_coding	cytochrome b5 type A (microsomal)
chr18	84887314	84889630	+	84870125	84889630	A5SS	0.2	50	50	ENSMUST00000163083.2	ENSMUSG00000024646.15	Cyb5a	chr18	protein_coding	cytochrome b5 type A (microsomal)
chr18	84995616;84999090	84999020;84999247	+	84995616	84999247	cassetteExon	0.5	100	100	ENSMUST00000224467.3	ENSMUSG00000034391.13	Fbxo15	chr18	protein_coding	F-box protein 15
chr18	84970383	84975445	+	84953305	84975445	A5SS	0.5	50	50	ENSMUST00000224467.3	ENSMUSG00000034391.13	Fbxo15	chr18	protein_coding	F-box protein 15
chr18	84983185	84983556	+	84982316	84983556	A5SS	0.5	50	50	ENSMUST00000224467.3	ENSMUSG00000034391.13	Fbxo15	chr18	protein_coding	F-box protein 15
chr18	84967577	84968765	-	84967577	84969128	A5SS	0.5	50	50	ENSMUST00000025547.4	ENSMUSG00000024645.6	Timm21	chr18	protein_coding	translocase of inner mitochondrial membrane 21
chr18	84965870;84966221	84965959;84967319	-	84965870	84967319	cassetteExon	0.5	100	100	ENSMUST00000235548.2	ENSMUSG00000024645.6	Timm21	chr18	protein_coding	translocase of inner mitochondrial membrane 21
chr18	84965870	84967319	-	84965870	84965959	A5SS&ES	0.5	50	50	ENSMUST00000235640.2	ENSMUSG00000024645.6	Timm21	chr18	protein_coding	translocase of inner mitochondrial membrane 21
chr18	84965870	84967319	-	84966221	84967319	3pMXE	0.5	50	50	ENSMUST00000235591.2	ENSMUSG00000024645.6	Timm21	chr18	protein_coding	translocase of inner mitochondrial membrane 21
chr18	86518211	86523254	+	86518211	86519038	A3SS	0.5	50	50	ENSMUST00000058829.4	ENSMUSG00000050321.4	Neto1	chr18	protein_coding	neuropilin (NRP) and tolloid (TLL)-like 1
chr18	86416514	86422765	+	86416514	86491740	A3SS	0.5	50	50	ENSMUST00000236600.2	ENSMUSG00000050321.4	Neto1	chr18	protein_coding	neuropilin (NRP) and tolloid (TLL)-like 1
chr18	86479452	86491740	+	86416514	86491740	A5SS	0.5	50	50	ENSMUST00000236600.2	ENSMUSG00000050321.4	Neto1	chr18	protein_coding	neuropilin (NRP) and tolloid (TLL)-like 1
chr18	86730396	86731030	+	86729901	86731030	A5SS	0.5	50	50	ENSMUST00000068423.10	ENSMUSG00000024647.15	Cbln2	chr18	protein_coding	cerebellin 2 precursor protein
chr18	88686823;88706321	88706191;88776474	-	88686823	88776474	cassetteExon	0.5	100	100	ENSMUST00000155169.2	ENSMUSG00000056153.16	Socs6	chr18	protein_coding	suppressor of cytokine signaling 6
chr18	88905457	88945515	-	88905457	88912286	5pMXE	0.5	50	50	ENSMUST00000136173.8	ENSMUSG00000056153.16	Socs6	chr18	protein_coding	suppressor of cytokine signaling 6
chr18	88889042	88905333	-	88810896	88905333	A3SS	0.25	50	50	ENSMUST00000136173.8	ENSMUSG00000056153.16	Socs6	chr18	protein_coding	suppressor of cytokine signaling 6
chr18	88905176	88905333	-	88810896	88905333	A3SS	0.25	50	50	ENSMUST00000136173.8	ENSMUSG00000056153.16	Socs6	chr18	protein_coding	suppressor of cytokine signaling 6
chr18	88905189	88905333	-	88810896	88905333	A3SS	0.25	50	50	ENSMUST00000136173.8	ENSMUSG00000056153.16	Socs6	chr18	protein_coding	suppressor of cytokine signaling 6
chr18	88889042	88905116	-	88872625	88905116	A3SS	0.5	50	50	ENSMUST00000237549.2	ENSMUSG00000056153.16	Socs6	chr18	protein_coding	suppressor of cytokine signaling 6
chr18	88889042	88905333	-	88905189	88905333	A3SS&ES	0.33	50	50	ENSMUST00000237549.2	ENSMUSG00000056153.16	Socs6	chr18	protein_coding	suppressor of cytokine signaling 6
chr18	88905176	88905333	-	88905189	88905333	A3SS	0.33	50	50	ENSMUST00000237549.2	ENSMUSG00000056153.16	Socs6	chr18	protein_coding	suppressor of cytokine signaling 6
chr18	88889042;88905176	88905116;88905333	-	88889042	88905333	cassetteExon	0.5	100	100	ENSMUST00000070116.12	ENSMUSG00000056153.16	Socs6	chr18	protein_coding	suppressor of cytokine signaling 6
chr18	88889042;88905189	88905116;88905333	-	88889042	88905333	cassetteExon	0.5	100	100	ENSMUST00000070116.12	ENSMUSG00000056153.16	Socs6	chr18	protein_coding	suppressor of cytokine signaling 6
chr18	88889042	88905337	-	88889042	88905333	A5SS	0.33	50	50	ENSMUST00000070116.12	ENSMUSG00000056153.16	Socs6	chr18	protein_coding	suppressor of cytokine signaling 6
chr18	88889042	88905116	-	88889042	88905337	A5SS	0.33	50	50	ENSMUST00000123826.2	ENSMUSG00000056153.16	Socs6	chr18	protein_coding	suppressor of cytokine signaling 6
chr18	89039887	89047016	+	89039887;89045171	89045083;89047016	ES	0.5	50	50	ENSMUST00000023828.9	ENSMUSG00000023066.11	Rttn	chr18	protein_coding	rotatin
chr18	89122185	89127375	+	89122185;89126278	89126173;89127375	ES	0.5	50	50	ENSMUST00000023828.9	ENSMUSG00000023066.11	Rttn	chr18	protein_coding	rotatin
chr18	89004199;89005370	89005306;89007559	+	89004199	89007559	cassetteExon	0.5	100	100	ENSMUST00000023828.9	ENSMUSG00000023066.11	Rttn	chr18	protein_coding	rotatin
chr18	89084042;89085060	89084910;89091669	+	89084042	89091669	cassetteExon	0.5	100	100	ENSMUST00000023828.9	ENSMUSG00000023066.11	Rttn	chr18	protein_coding	rotatin
chr18	89131575	89133624	+	89131575	89133569	A3SS	0.5	50	50	ENSMUST00000023828.9	ENSMUSG00000023066.11	Rttn	chr18	protein_coding	rotatin
chr18	89053950	89055115	+	89047133	89055115	A5SS	0.5	50	50	ENSMUST00000023828.9	ENSMUSG00000023066.11	Rttn	chr18	protein_coding	rotatin
chr18	89122185	89127375	+	89126278	89127375	5pMXE	0.5	50	50	ENSMUST00000237196.2	ENSMUSG00000023066.11	Rttn	chr18	protein_coding	rotatin
chr18	89225489	89265109	+	89225489;89249788	89249647;89265109	ES	0.2	50	50	ENSMUST00000235651.2	ENSMUSG00000034028.17	Cd226	chr18	protein_coding	CD226 antigen
chr18	89195256;89215763	89215551;89224694	+	89195256	89224694	cassetteExon	0.5	100	100	ENSMUST00000235651.2	ENSMUSG00000034028.17	Cd226	chr18	protein_coding	CD226 antigen
chr18	89195256;89215763	89215551;89265109	+	89195256;89249788	89224694;89265109	MXE	0.5	100	100	ENSMUST00000235651.2	ENSMUSG00000034028.17	Cd226	chr18	protein_coding	CD226 antigen
chr18	89224291	89224694	+	89195256	89224694	A5SS	0.33	50	50	ENSMUST00000235651.2	ENSMUSG00000034028.17	Cd226	chr18	protein_coding	CD226 antigen
chr18	89265242	89281395	+	89265456	89281395	A5SS	0.5	50	50	ENSMUST00000235651.2	ENSMUSG00000034028.17	Cd226	chr18	protein_coding	CD226 antigen
chr18	89195256;89215763	89215551;89265109	+	89195256	89265109	cassetteExon	0.5	100	100	ENSMUST00000236644.2	ENSMUSG00000034028.17	Cd226	chr18	protein_coding	CD226 antigen
chr18	89195256;89224765	89224694;89265109	+	89195256	89265109	cassetteExon	0.5	100	100	ENSMUST00000236644.2	ENSMUSG00000034028.17	Cd226	chr18	protein_coding	CD226 antigen
chr18	89225489	89265109	+	89195256	89265109	A5SS	0.2	50	50	ENSMUST00000236644.2	ENSMUSG00000034028.17	Cd226	chr18	protein_coding	CD226 antigen
chr18	89249788	89265109	+	89195256	89265109	A5SS	0.2	50	50	ENSMUST00000236644.2	ENSMUSG00000034028.17	Cd226	chr18	protein_coding	CD226 antigen
chr18	89224765	89265109	+	89224765;89225489	89225151;89265109	ES	0.2	50	50	ENSMUST00000236828.2	ENSMUSG00000034028.17	Cd226	chr18	protein_coding	CD226 antigen
chr18	89224291	89224694	+	89215763	89224694	A5SS	0.33	50	50	ENSMUST00000236828.2	ENSMUSG00000034028.17	Cd226	chr18	protein_coding	CD226 antigen
chr18	89195256	89224694	+	89215763	89224694	5pMXE	0.33	50	50	ENSMUST00000237110.2	ENSMUSG00000034028.17	Cd226	chr18	protein_coding	CD226 antigen
chr18	89224765	89265109	+	89224765	89225151	3pMXE	0.5	50	50	ENSMUST00000237110.2	ENSMUSG00000034028.17	Cd226	chr18	protein_coding	CD226 antigen
chr18	89215763	89265109	+	89215763;89224765	89224694;89265109	ES	0.25	50	50	ENSMUST00000097496.4	ENSMUSG00000034028.17	Cd226	chr18	protein_coding	CD226 antigen
chr18	89249788	89265109	+	89224765	89265109	A5SS	0.25	50	50	ENSMUST00000097496.4	ENSMUSG00000034028.17	Cd226	chr18	protein_coding	CD226 antigen
chr18	89195256	89265109	+	89215763	89265109	5pMXE	0.2	50	50	ENSMUST00000236452.2	ENSMUSG00000034028.17	Cd226	chr18	protein_coding	CD226 antigen
chr18	89225489	89265109	+	89215763	89265109	A5SS	0.2	50	50	ENSMUST00000236452.2	ENSMUSG00000034028.17	Cd226	chr18	protein_coding	CD226 antigen
chr18	89249788	89265109	+	89215763	89265109	A5SS	0.2	50	50	ENSMUST00000236452.2	ENSMUSG00000034028.17	Cd226	chr18	protein_coding	CD226 antigen
chr18	90551398;90551816	90551715;90552506	+	90551398	90552506	cassetteExon	0.5	100	100	ENSMUST00000025515.7	ENSMUSG00000024614.8	Tmx3	chr18	protein_coding	thioredoxin-related transmembrane protein 3
chr18	90548282	90549123	+	90548282	90551107	A3SS	0.5	50	50	ENSMUST00000025515.7	ENSMUSG00000024614.8	Tmx3	chr18	protein_coding	thioredoxin-related transmembrane protein 3
chr18	90556691	90558551	+	90556691	90558063	A3SS	0.5	50	50	ENSMUST00000025515.7	ENSMUSG00000024614.8	Tmx3	chr18	protein_coding	thioredoxin-related transmembrane protein 3
chr18	90528360	90529403	+	90528501	90529403	A5SS	0.5	50	50	ENSMUST00000025515.7	ENSMUSG00000024614.8	Tmx3	chr18	protein_coding	thioredoxin-related transmembrane protein 3
chr18	90607206	90608955	+	90607206;90607458	90607398;90608955	ES	0.5	50	50	ENSMUST00000211710.2	ENSMUSG00000110277.3	Gm45871	chr18	protein_coding	predicted gene 45871
chr18	90603675	90607080	+	90598023	90607080	A5SS	0.5	50	50	ENSMUST00000211710.2	ENSMUSG00000110277.3	Gm45871	chr18	protein_coding	predicted gene 45871
chr18	90607206	90608955	+	90607206	90607398	3pMXE	0.5	50	50	ENSMUST00000209821.2	ENSMUSG00000110277.3	Gm45871	chr18	protein_coding	predicted gene 45871
chr19	3122953;3125885	3125714;3246945	-	3122953	3246945	cassetteExon	0.5	100	100	ENSMUST00000237047.2	ENSMUSG00000100969.8	1700030N03Rik	chr19	lncRNA	RIKEN cDNA 1700030N03 gene
chr19	3118149	3119367	-	3109991	3119367	A3SS	0.5	50	50	ENSMUST00000237047.2	ENSMUSG00000100969.8	1700030N03Rik	chr19	lncRNA	RIKEN cDNA 1700030N03 gene
chr19	3204009	3246945	-	3122953	3246945	A3SS	0.33	50	50	ENSMUST00000237047.2	ENSMUSG00000100969.8	1700030N03Rik	chr19	lncRNA	RIKEN cDNA 1700030N03 gene
chr19	3204009	3246945	-	3125885	3246945	A3SS	0.33	50	50	ENSMUST00000190575.7	ENSMUSG00000100969.8	1700030N03Rik	chr19	lncRNA	RIKEN cDNA 1700030N03 gene
chr19	3200006	3203931	-	3202094	3203931	A3SS&ES	0.25	50	50	ENSMUST00000235916.2	ENSMUSG00000100969.8	1700030N03Rik	chr19	lncRNA	RIKEN cDNA 1700030N03 gene
chr19	3203401	3203931	-	3202094	3203931	A3SS	0.25	50	50	ENSMUST00000235916.2	ENSMUSG00000100969.8	1700030N03Rik	chr19	lncRNA	RIKEN cDNA 1700030N03 gene
chr19	3196265	3209941	-	3196265	3197633	A5SS&ES	0.33	50	50	ENSMUST00000235916.2	ENSMUSG00000100969.8	1700030N03Rik	chr19	lncRNA	RIKEN cDNA 1700030N03 gene
chr19	3204009	3209930	-	3204009	3246945	A5SS	0.5	50	50	ENSMUST00000235916.2	ENSMUSG00000100969.8	1700030N03Rik	chr19	lncRNA	RIKEN cDNA 1700030N03 gene
chr19	3196265	3203931	-	3196265	3209941	A5SS	0.33	50	50	ENSMUST00000189643.2	ENSMUSG00000100969.8	1700030N03Rik	chr19	lncRNA	RIKEN cDNA 1700030N03 gene
chr19	3200006	3203931	-	3196265	3203931	A3SS	0.25	50	50	ENSMUST00000191405.7	ENSMUSG00000100969.8	1700030N03Rik	chr19	lncRNA	RIKEN cDNA 1700030N03 gene
chr19	3202094	3203931	-	3196265	3203931	A3SS	0.25	50	50	ENSMUST00000191405.7	ENSMUSG00000100969.8	1700030N03Rik	chr19	lncRNA	RIKEN cDNA 1700030N03 gene
chr19	3203401	3203931	-	3196265	3203931	A3SS	0.25	50	50	ENSMUST00000191405.7	ENSMUSG00000100969.8	1700030N03Rik	chr19	lncRNA	RIKEN cDNA 1700030N03 gene
chr19	3196265	3197633	-	3196265	3203931	A5SS	0.33	50	50	ENSMUST00000191405.7	ENSMUSG00000100969.8	1700030N03Rik	chr19	lncRNA	RIKEN cDNA 1700030N03 gene
chr19	3203401	3203931	-	3200006	3203931	A3SS	0.25	50	50	ENSMUST00000190668.7	ENSMUSG00000100969.8	1700030N03Rik	chr19	lncRNA	RIKEN cDNA 1700030N03 gene
chr19	3311635	3314811	-	3311635;3312144	3311975;3314811	ES	0.5	50	50	ENSMUST00000025751.11	ENSMUSG00000024831.15	Ighmbp2	chr19	protein_coding	immunoglobulin mu binding protein 2
chr19	3326919	3329807	-	3326919;3329630	3329533;3329807	ES	0.5	50	50	ENSMUST00000025751.11	ENSMUSG00000024831.15	Ighmbp2	chr19	protein_coding	immunoglobulin mu binding protein 2
chr19	3339087	3340977	+	3339087	3342436	A3SS	0.5	50	50	ENSMUST00000025745.10	ENSMUSG00000024829.13	Mrpl21	chr19	protein_coding	mitochondrial ribosomal protein L21
chr19	3334833	3335310	+	3334817	3335310	A5SS	0.5	50	50	ENSMUST00000025745.10	ENSMUSG00000024829.13	Mrpl21	chr19	protein_coding	mitochondrial ribosomal protein L21
chr19	3373374	3399189	+	3372698	3399189	A5SS	0.25	50	50	ENSMUST00000237938.2	ENSMUSG00000024900.6	Cpt1a	chr19	protein_coding	carnitine palmitoyltransferase 1a, liver
chr19	3383815	3399189	+	3372698	3399189	A5SS	0.25	50	50	ENSMUST00000237938.2	ENSMUSG00000024900.6	Cpt1a	chr19	protein_coding	carnitine palmitoyltransferase 1a, liver
chr19	3391872	3399189	+	3372698	3399189	A5SS	0.25	50	50	ENSMUST00000237938.2	ENSMUSG00000024900.6	Cpt1a	chr19	protein_coding	carnitine palmitoyltransferase 1a, liver
chr19	3383815	3399189	+	3373374	3399189	A5SS	0.25	50	50	ENSMUST00000025835.6	ENSMUSG00000024900.6	Cpt1a	chr19	protein_coding	carnitine palmitoyltransferase 1a, liver
chr19	3391872	3399189	+	3373374	3399189	A5SS	0.25	50	50	ENSMUST00000025835.6	ENSMUSG00000024900.6	Cpt1a	chr19	protein_coding	carnitine palmitoyltransferase 1a, liver
chr19	3391872	3399189	+	3383815	3399189	A5SS	0.25	50	50	ENSMUST00000237562.2	ENSMUSG00000024900.6	Cpt1a	chr19	protein_coding	carnitine palmitoyltransferase 1a, liver
chr19	3439869	3442103	+	3439333	3442103	A5SS	0.33	50	50	ENSMUST00000025840.16	ENSMUSG00000024905.16	Tesmin	chr19	protein_coding	testis expressed metallothionein like
chr19	3441144	3442103	+	3439333	3442103	A5SS	0.33	50	50	ENSMUST00000025840.16	ENSMUSG00000024905.16	Tesmin	chr19	protein_coding	testis expressed metallothionein like
chr19	3439869;3441144	3441076;3442103	+	3439869	3442103	cassetteExon	0.5	100	100	ENSMUST00000127142.2	ENSMUSG00000024905.16	Tesmin	chr19	protein_coding	testis expressed metallothionein like
chr19	3460163	3461129	-	3460165	3461129	A3SS	0.5	50	50	ENSMUST00000237521.2	ENSMUSG00000024907.8	Gal	chr19	protein_coding	galanin and GMAP prepropeptide
chr19	3576934	3625641	-	3576934;3594255	3594108;3625641	ES	0.5	50	50	ENSMUST00000025846.16	ENSMUSG00000024908.16	Ppp6r3	chr19	protein_coding	protein phosphatase 6, regulatory subunit 3
chr19	3509480;3509764	3509747;3514545	-	3509480	3514545	cassetteExon	0.5	100	100	ENSMUST00000025846.16	ENSMUSG00000024908.16	Ppp6r3	chr19	protein_coding	protein phosphatase 6, regulatory subunit 3
chr19	3523866;3528364	3528278;3534831	-	3523866	3534831	cassetteExon	0.5	100	100	ENSMUST00000025846.16	ENSMUSG00000024908.16	Ppp6r3	chr19	protein_coding	protein phosphatase 6, regulatory subunit 3
chr19	3576934;3577675	3577571;3594108	-	3576934	3594108	cassetteExon	0.5	100	100	ENSMUST00000025846.16	ENSMUSG00000024908.16	Ppp6r3	chr19	protein_coding	protein phosphatase 6, regulatory subunit 3
chr19	3523815	3534831	-	3523866	3534831	A3SS	0.33	50	50	ENSMUST00000025846.16	ENSMUSG00000024908.16	Ppp6r3	chr19	protein_coding	protein phosphatase 6, regulatory subunit 3
chr19	3576929	3594108	-	3576934	3594108	A3SS	0.33	50	50	ENSMUST00000025846.16	ENSMUSG00000024908.16	Ppp6r3	chr19	protein_coding	protein phosphatase 6, regulatory subunit 3
chr19	3523815;3528364	3528278;3534831	-	3523815	3534831	cassetteExon	0.5	100	100	ENSMUST00000172362.3	ENSMUSG00000024908.16	Ppp6r3	chr19	protein_coding	protein phosphatase 6, regulatory subunit 3
chr19	3576934	3577571	-	3576934	3625641	A5SS	0.33	50	50	ENSMUST00000172362.3	ENSMUSG00000024908.16	Ppp6r3	chr19	protein_coding	protein phosphatase 6, regulatory subunit 3
chr19	3523815	3528278	-	3523866	3528278	A3SS	0.5	50	50	ENSMUST00000113997.9	ENSMUSG00000024908.16	Ppp6r3	chr19	protein_coding	protein phosphatase 6, regulatory subunit 3
chr19	3523815	3534831	-	3528364	3534831	A3SS&ES	0.33	50	50	ENSMUST00000113997.9	ENSMUSG00000024908.16	Ppp6r3	chr19	protein_coding	protein phosphatase 6, regulatory subunit 3
chr19	3523866	3534831	-	3528364	3534831	A3SS&ES	0.33	50	50	ENSMUST00000225624.2	ENSMUSG00000024908.16	Ppp6r3	chr19	protein_coding	protein phosphatase 6, regulatory subunit 3
chr19	3576934	3625641	-	3594255	3625641	A3SS&ES	0.5	50	50	ENSMUST00000225446.2	ENSMUSG00000024908.16	Ppp6r3	chr19	protein_coding	protein phosphatase 6, regulatory subunit 3
chr19	3577675	3594108	-	3576929	3594108	A3SS	0.33	50	50	ENSMUST00000225446.2	ENSMUSG00000024908.16	Ppp6r3	chr19	protein_coding	protein phosphatase 6, regulatory subunit 3
chr19	3699600;3701955	3701843;3702133	-	3699600	3702133	cassetteExon	0.5	100	100	ENSMUST00000025856.17	ENSMUSG00000024913.17	Lrp5	chr19	protein_coding	low density lipoprotein receptor-related protein 5
chr19	3660209	3662198	-	3660238	3662198	A3SS	0.5	50	50	ENSMUST00000025856.17	ENSMUSG00000024913.17	Lrp5	chr19	protein_coding	low density lipoprotein receptor-related protein 5
chr19	3758436	3765638	+	3758436;3764625	3764407;3765638	ES	0.5	50	50	ENSMUST00000237320.2	ENSMUSG00000035372.3	1810055G02Rik	chr19	protein_coding	RIKEN cDNA 1810055G02 gene
chr19	3758436	3764047	+	3758436	3764407	A3SS	0.25	50	50	ENSMUST00000237320.2	ENSMUSG00000035372.3	1810055G02Rik	chr19	protein_coding	RIKEN cDNA 1810055G02 gene
chr19	3758436	3764404	+	3758436	3764407	A3SS	0.25	50	50	ENSMUST00000237320.2	ENSMUSG00000035372.3	1810055G02Rik	chr19	protein_coding	RIKEN cDNA 1810055G02 gene
chr19	3758436	3765638	+	3758436;3764625	3764404;3765638	ES	0.5	50	50	ENSMUST00000039048.2	ENSMUSG00000035372.3	1810055G02Rik	chr19	protein_coding	RIKEN cDNA 1810055G02 gene
chr19	3758436	3764047	+	3758436	3764404	A3SS	0.25	50	50	ENSMUST00000039048.2	ENSMUSG00000035372.3	1810055G02Rik	chr19	protein_coding	RIKEN cDNA 1810055G02 gene
chr19	3758508	3764404	+	3758436	3764404	A5SS	0.5	50	50	ENSMUST00000039048.2	ENSMUSG00000035372.3	1810055G02Rik	chr19	protein_coding	RIKEN cDNA 1810055G02 gene
chr19	3758436	3764047	+	3758436	3765638	A3SS	0.25	50	50	ENSMUST00000235295.2	ENSMUSG00000035372.3	1810055G02Rik	chr19	protein_coding	RIKEN cDNA 1810055G02 gene
chr19	3758436	3765638	+	3758436;3764625	3764047;3765638	ES	0.5	50	50	ENSMUST00000237955.2	ENSMUSG00000035372.3	1810055G02Rik	chr19	protein_coding	RIKEN cDNA 1810055G02 gene
chr19	3758508	3764047	+	3758436	3764047	A5SS	0.5	50	50	ENSMUST00000237955.2	ENSMUSG00000035372.3	1810055G02Rik	chr19	protein_coding	RIKEN cDNA 1810055G02 gene
chr19	3758508	3764047	+	3758508	3764404	A3SS	0.5	50	50	ENSMUST00000235837.2	ENSMUSG00000035372.3	1810055G02Rik	chr19	protein_coding	RIKEN cDNA 1810055G02 gene
chr19	3758436	3765638	+	3764625	3765638	A5SS&ES	0.5	50	50	ENSMUST00000235837.2	ENSMUSG00000035372.3	1810055G02Rik	chr19	protein_coding	RIKEN cDNA 1810055G02 gene
chr19	3818340	3843068	+	3818340;3836627	3836389;3843068	ES	0.5	50	50	ENSMUST00000052699.13	ENSMUSG00000045098.20	Kmt5b	chr19	protein_coding	lysine methyltransferase 5B
chr19	3843215	3852075	+	3843215;3846708	3846640;3852075	ES	0.5	50	50	ENSMUST00000052699.13	ENSMUSG00000045098.20	Kmt5b	chr19	protein_coding	lysine methyltransferase 5B
chr19	3818340;3832279	3832220;3836389	+	3818340	3836389	cassetteExon	0.5	100	100	ENSMUST00000052699.13	ENSMUSG00000045098.20	Kmt5b	chr19	protein_coding	lysine methyltransferase 5B
chr19	3818340	3819953	+	3818340	3836389	A3SS	0.25	50	50	ENSMUST00000052699.13	ENSMUSG00000045098.20	Kmt5b	chr19	protein_coding	lysine methyltransferase 5B
chr19	3852897	3854448	+	3852897	3854395	A3SS	0.5	50	50	ENSMUST00000052699.13	ENSMUSG00000045098.20	Kmt5b	chr19	protein_coding	lysine methyltransferase 5B
chr19	3818227	3836389	+	3818340	3836389	A5SS	0.25	50	50	ENSMUST00000052699.13	ENSMUSG00000045098.20	Kmt5b	chr19	protein_coding	lysine methyltransferase 5B
chr19	3832852	3836389	+	3818340	3836389	A5SS	0.25	50	50	ENSMUST00000052699.13	ENSMUSG00000045098.20	Kmt5b	chr19	protein_coding	lysine methyltransferase 5B
chr19	3832279;3832852	3832756;3836389	+	3832279	3836389	cassetteExon	0.5	100	100	ENSMUST00000113974.11	ENSMUSG00000045098.20	Kmt5b	chr19	protein_coding	lysine methyltransferase 5B
chr19	3818340	3819953	+	3818340	3832220	A3SS	0.25	50	50	ENSMUST00000113974.11	ENSMUSG00000045098.20	Kmt5b	chr19	protein_coding	lysine methyltransferase 5B
chr19	3857421	3858633	+	3857421	3864115	A3SS	0.5	50	50	ENSMUST00000113974.11	ENSMUSG00000045098.20	Kmt5b	chr19	protein_coding	lysine methyltransferase 5B
chr19	3818227	3836389	+	3832279	3836389	A5SS&ES	0.25	50	50	ENSMUST00000113974.11	ENSMUSG00000045098.20	Kmt5b	chr19	protein_coding	lysine methyltransferase 5B
chr19	3818702	3832220	+	3818340	3832220	A5SS	0.33	50	50	ENSMUST00000113974.11	ENSMUSG00000045098.20	Kmt5b	chr19	protein_coding	lysine methyltransferase 5B
chr19	3827512	3832220	+	3818340	3832220	A5SS	0.33	50	50	ENSMUST00000113974.11	ENSMUSG00000045098.20	Kmt5b	chr19	protein_coding	lysine methyltransferase 5B
chr19	3818227	3836389	+	3832852	3836389	A5SS&ES	0.25	50	50	ENSMUST00000113968.9	ENSMUSG00000045098.20	Kmt5b	chr19	protein_coding	lysine methyltransferase 5B
chr19	3818702	3832220	+	3827512	3832220	A5SS&ES	0.33	50	50	ENSMUST00000113968.9	ENSMUSG00000045098.20	Kmt5b	chr19	protein_coding	lysine methyltransferase 5B
chr19	3818340	3836389	+	3818340	3832220	3pMXE	0.25	50	50	ENSMUST00000155618.2	ENSMUSG00000045098.20	Kmt5b	chr19	protein_coding	lysine methyltransferase 5B
chr19	3818340	3843068	+	3818340	3832220	3pMXE	0.25	50	50	ENSMUST00000155618.2	ENSMUSG00000045098.20	Kmt5b	chr19	protein_coding	lysine methyltransferase 5B
chr19	3818340	3819953	+	3818340	3843068	A3SS	0.25	50	50	ENSMUST00000152935.8	ENSMUSG00000045098.20	Kmt5b	chr19	protein_coding	lysine methyltransferase 5B
chr19	3818340	3843068	+	3836627	3843068	A5SS&ES	0.5	50	50	ENSMUST00000176407.8	ENSMUSG00000045098.20	Kmt5b	chr19	protein_coding	lysine methyltransferase 5B
chr19	3843215	3852075	+	3843215	3846640	3pMXE	0.5	50	50	ENSMUST00000177355.2	ENSMUSG00000045098.20	Kmt5b	chr19	protein_coding	lysine methyltransferase 5B
chr19	3843215	3852075	+	3846708	3852075	5pMXE	0.5	50	50	ENSMUST00000236012.2	ENSMUSG00000045098.20	Kmt5b	chr19	protein_coding	lysine methyltransferase 5B
chr19	3914759	3925735	+	3914759;3921062	3921003;3925735	ES	0.25	50	50	ENSMUST00000128694.8	ENSMUSG00000024843.16	Chka	chr19	protein_coding	choline kinase alpha
chr19	3914759;3932120	3932010;3934472	+	3914759;3925788	3921003;3934472	MXE	0.5	100	100	ENSMUST00000128694.8	ENSMUSG00000024843.16	Chka	chr19	protein_coding	choline kinase alpha
chr19	3925788;3932120	3931998;3934472	+	3925788	3934472	cassetteExon	0.5	100	100	ENSMUST00000128694.8	ENSMUSG00000024843.16	Chka	chr19	protein_coding	choline kinase alpha
chr19	3924798	3925735	+	3921062	3925735	A5SS	0.25	50	50	ENSMUST00000128694.8	ENSMUSG00000024843.16	Chka	chr19	protein_coding	choline kinase alpha
chr19	3925471	3925735	+	3921062	3925735	A5SS	0.25	50	50	ENSMUST00000128694.8	ENSMUSG00000024843.16	Chka	chr19	protein_coding	choline kinase alpha
chr19	3914759;3925788	3925735;3934472	+	3914759	3934472	cassetteExon	0.5	100	100	ENSMUST00000072055.13	ENSMUSG00000024843.16	Chka	chr19	protein_coding	choline kinase alpha
chr19	3914759;3932120	3932010;3934472	+	3914759	3934472	cassetteExon	0.5	100	100	ENSMUST00000072055.13	ENSMUSG00000024843.16	Chka	chr19	protein_coding	choline kinase alpha
chr19	3914759	3921003	+	3914759	3934472	A3SS	0.25	50	50	ENSMUST00000072055.13	ENSMUSG00000024843.16	Chka	chr19	protein_coding	choline kinase alpha
chr19	3914759	3925735	+	3914759	3921003	3pMXE	0.25	50	50	ENSMUST00000125411.8	ENSMUSG00000024843.16	Chka	chr19	protein_coding	choline kinase alpha
chr19	3914759	3932010	+	3914759	3921003	3pMXE	0.25	50	50	ENSMUST00000125411.8	ENSMUSG00000024843.16	Chka	chr19	protein_coding	choline kinase alpha
chr19	3914759	3932010	+	3914759	3925735	3pMXE	0.25	50	50	ENSMUST00000124219.2	ENSMUSG00000024843.16	Chka	chr19	protein_coding	choline kinase alpha
chr19	3914759	3934472	+	3914759	3925735	3pMXE	0.25	50	50	ENSMUST00000124219.2	ENSMUSG00000024843.16	Chka	chr19	protein_coding	choline kinase alpha
chr19	3924798	3925735	+	3914759	3925735	A5SS	0.25	50	50	ENSMUST00000124219.2	ENSMUSG00000024843.16	Chka	chr19	protein_coding	choline kinase alpha
chr19	3925471	3925735	+	3914759	3925735	A5SS	0.25	50	50	ENSMUST00000124219.2	ENSMUSG00000024843.16	Chka	chr19	protein_coding	choline kinase alpha
chr19	3914759;3932120	3932010;3934472	+	3914759;3925788	3925735;3934472	MXE	0.5	100	100	ENSMUST00000025760.13	ENSMUSG00000024843.16	Chka	chr19	protein_coding	choline kinase alpha
chr19	3925471	3925735	+	3924798	3925735	A5SS	0.25	50	50	ENSMUST00000153343.2	ENSMUSG00000024843.16	Chka	chr19	protein_coding	choline kinase alpha
chr19	3947169	3947758	-	3947169;3947681	3947468;3947758	ES	0.5	50	50	ENSMUST00000131327.8	ENSMUSG00000001750.17	Tcirg1	chr19	protein_coding	T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3
chr19	3948638	3948980	-	3948875	3948980	A3SS	0.5	50	50	ENSMUST00000131327.8	ENSMUSG00000001750.17	Tcirg1	chr19	protein_coding	T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3
chr19	3949119	3952344	-	3949119	3951891	A5SS	0.5	50	50	ENSMUST00000131327.8	ENSMUSG00000001750.17	Tcirg1	chr19	protein_coding	T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3
chr19	3948638	3948980	-	3948638;3948875	3948718;3948980	ES	0.5	50	50	ENSMUST00000145791.8	ENSMUSG00000001750.17	Tcirg1	chr19	protein_coding	T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3
chr19	3949119	3952344	-	3949119;3952035	3951891;3952344	ES	0.5	50	50	ENSMUST00000145791.8	ENSMUSG00000001750.17	Tcirg1	chr19	protein_coding	T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3
chr19	3954705	3956108	-	3954705	3955075	5pMXE	0.25	50	50	ENSMUST00000145791.8	ENSMUSG00000001750.17	Tcirg1	chr19	protein_coding	T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3
chr19	3954705	3956524	-	3954705	3955075	5pMXE	0.25	50	50	ENSMUST00000145791.8	ENSMUSG00000001750.17	Tcirg1	chr19	protein_coding	T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3
chr19	3954705	3957019	-	3954705	3955075	5pMXE	0.25	50	50	ENSMUST00000145791.8	ENSMUSG00000001750.17	Tcirg1	chr19	protein_coding	T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3
chr19	3954295	3954614	-	3954295	3954585	A5SS	0.5	50	50	ENSMUST00000145791.8	ENSMUSG00000001750.17	Tcirg1	chr19	protein_coding	T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3
chr19	3954705	3957019	-	3954705	3956524	5pMXE	0.25	50	50	ENSMUST00000126070.9	ENSMUSG00000001750.17	Tcirg1	chr19	protein_coding	T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3
chr19	3954705	3956108	-	3954705	3956524	A5SS	0.25	50	50	ENSMUST00000126070.9	ENSMUSG00000001750.17	Tcirg1	chr19	protein_coding	T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3
chr19	3954705	3956108	-	3954705	3957019	A5SS	0.25	50	50	ENSMUST00000135070.8	ENSMUSG00000001750.17	Tcirg1	chr19	protein_coding	T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3
chr19	3947169	3947758	-	3947169	3947468	A5SS	0.5	50	50	ENSMUST00000134698.2	ENSMUSG00000001750.17	Tcirg1	chr19	protein_coding	T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3
chr19	3948638	3948980	-	3948638	3948718	5pMXE	0.5	50	50	ENSMUST00000126643.3	ENSMUSG00000001750.17	Tcirg1	chr19	protein_coding	T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3
chr19	3961746	3962710	-	3961746	3962203	5pMXE	0.25	50	50	ENSMUST00000236801.2	ENSMUSG00000059734.8	Ndufs8	chr19	protein_coding	NADH:ubiquinone oxidoreductase core subunit S8
chr19	3961597	3961689	-	3961616	3961689	A3SS	0.5	50	50	ENSMUST00000236801.2	ENSMUSG00000059734.8	Ndufs8	chr19	protein_coding	NADH:ubiquinone oxidoreductase core subunit S8
chr19	3961746	3962467	-	3961746	3962203	A5SS	0.25	50	50	ENSMUST00000236801.2	ENSMUSG00000059734.8	Ndufs8	chr19	protein_coding	NADH:ubiquinone oxidoreductase core subunit S8
chr19	3961746	3962470	-	3961746	3962203	A5SS	0.25	50	50	ENSMUST00000236801.2	ENSMUSG00000059734.8	Ndufs8	chr19	protein_coding	NADH:ubiquinone oxidoreductase core subunit S8
chr19	3961746	3962470	-	3961746	3962467	A5SS	0.25	50	50	ENSMUST00000075092.8	ENSMUSG00000059734.8	Ndufs8	chr19	protein_coding	NADH:ubiquinone oxidoreductase core subunit S8
chr19	3961746	3962710	-	3961746	3962467	A5SS	0.25	50	50	ENSMUST00000075092.8	ENSMUSG00000059734.8	Ndufs8	chr19	protein_coding	NADH:ubiquinone oxidoreductase core subunit S8
chr19	3961746	3962470	-	3961746	3962710	A5SS	0.25	50	50	ENSMUST00000237341.2	ENSMUSG00000059734.8	Ndufs8	chr19	protein_coding	NADH:ubiquinone oxidoreductase core subunit S8
chr19	3969624	3970797	-	3968989	3970797	A3SS	0.5	50	50	ENSMUST00000051803.8	ENSMUSG00000024885.10	Aldh3b1	chr19	protein_coding	aldehyde dehydrogenase 3 family, member B1
chr19	3986422	3991885	+	3986422;3991681	3991520;3991885	ES	0.5	50	50	ENSMUST00000165711.3	ENSMUSG00000036908.18	Unc93b1	chr19	protein_coding	unc-93 homolog B1, TLR signaling regulator
chr19	3993711;3994296	3994023;3997007	+	3993711	3997007	cassetteExon	0.5	100	100	ENSMUST00000165711.3	ENSMUSG00000036908.18	Unc93b1	chr19	protein_coding	unc-93 homolog B1, TLR signaling regulator
chr19	3986422	3991885	+	3986422	3991520	3pMXE	0.5	50	50	ENSMUST00000237112.2	ENSMUSG00000036908.18	Unc93b1	chr19	protein_coding	unc-93 homolog B1, TLR signaling regulator
chr19	3986422	3991885	+	3991681	3991885	5pMXE	0.5	50	50	ENSMUST00000237030.2	ENSMUSG00000036908.18	Unc93b1	chr19	protein_coding	unc-93 homolog B1, TLR signaling regulator
chr19	4016019	4018442	+	4016019;4016538	4016372;4018442	ES	0.5	50	50	ENSMUST00000179433.8	ENSMUSG00000037263.14	Aldh3b3	chr19	protein_coding	aldehyde dehydrogenase 3 family, member B3
chr19	4014001	4014472	+	4014001	4014468	A3SS	0.5	50	50	ENSMUST00000179433.8	ENSMUSG00000037263.14	Aldh3b3	chr19	protein_coding	aldehyde dehydrogenase 3 family, member B3
chr19	4016019	4018442	+	4016538	4018442	A5SS	0.5	50	50	ENSMUST00000189124.2	ENSMUSG00000037263.14	Aldh3b3	chr19	protein_coding	aldehyde dehydrogenase 3 family, member B3
chr19	4036611	4037051	+	4036611;4036951	4036828;4037051	ES	0.5	50	50	ENSMUST00000236224.2	ENSMUSG00000024866.11	Acy3	chr19	protein_coding	aspartoacylase (aminoacylase) 3
chr19	4036611	4036823	+	4036611	4036828	A3SS	0.33	50	50	ENSMUST00000236224.2	ENSMUSG00000024866.11	Acy3	chr19	protein_coding	aspartoacylase (aminoacylase) 3
chr19	4037305	4037450	+	4037305	4037731	A3SS	0.5	50	50	ENSMUST00000236224.2	ENSMUSG00000024866.11	Acy3	chr19	protein_coding	aspartoacylase (aminoacylase) 3
chr19	4036611	4037051	+	4036611;4036951	4036823;4037051	ES	0.5	50	50	ENSMUST00000236510.2	ENSMUSG00000024866.11	Acy3	chr19	protein_coding	aspartoacylase (aminoacylase) 3
chr19	4036611	4037051	+	4036951	4037051	A5SS	0.5	50	50	ENSMUST00000237910.2	ENSMUSG00000024866.11	Acy3	chr19	protein_coding	aspartoacylase (aminoacylase) 3
chr19	4054167	4054265	+	4054167	4054323	A3SS	0.5	50	50	ENSMUST00000155405.8	ENSMUSG00000024869.11	Gm49405	chr19	protein_coding	predicted gene, 49405
chr19	4054816	4056061	+	4054816	4056110	A3SS	0.5	50	50	ENSMUST00000025806.5	ENSMUSG00000024871.12	Doc2g	chr19	protein_coding	double C2, gamma
chr19	4060009	4061346	-	4060009;4061272	4061102;4061346	ES	0.5	50	50	ENSMUST00000237862.2	ENSMUSG00000037916.15	Ndufv1	chr19	protein_coding	NADH:ubiquinone oxidoreductase core subunit V1
chr19	4057939	4058048	-	4057915	4058048	A3SS	0.5	50	50	ENSMUST00000237862.2	ENSMUSG00000037916.15	Ndufv1	chr19	protein_coding	NADH:ubiquinone oxidoreductase core subunit V1
chr19	4060019	4061102	-	4060009	4061102	A3SS	0.5	50	50	ENSMUST00000237862.2	ENSMUSG00000037916.15	Ndufv1	chr19	protein_coding	NADH:ubiquinone oxidoreductase core subunit V1
chr19	4061272	4062551	-	4061272	4061346	A5SS&ES	0.5	50	50	ENSMUST00000237862.2	ENSMUSG00000037916.15	Ndufv1	chr19	protein_coding	NADH:ubiquinone oxidoreductase core subunit V1
chr19	4061428	4062551	-	4061428	4062594	A5SS	0.25	50	50	ENSMUST00000237862.2	ENSMUSG00000037916.15	Ndufv1	chr19	protein_coding	NADH:ubiquinone oxidoreductase core subunit V1
chr19	4061428	4062578	-	4061428	4062594	A5SS	0.25	50	50	ENSMUST00000237862.2	ENSMUSG00000037916.15	Ndufv1	chr19	protein_coding	NADH:ubiquinone oxidoreductase core subunit V1
chr19	4061428	4062657	-	4061428	4062594	A5SS	0.25	50	50	ENSMUST00000237862.2	ENSMUSG00000037916.15	Ndufv1	chr19	protein_coding	NADH:ubiquinone oxidoreductase core subunit V1
chr19	4060009;4061424	4061346;4062551	-	4060009;4061272	4061102;4062551	MXE	0.5	100	100	ENSMUST00000134479.8	ENSMUSG00000037916.15	Ndufv1	chr19	protein_coding	NADH:ubiquinone oxidoreductase core subunit V1
chr19	4061272;4061424	4061346;4062551	-	4061272	4062551	cassetteExon	0.5	100	100	ENSMUST00000134479.8	ENSMUSG00000037916.15	Ndufv1	chr19	protein_coding	NADH:ubiquinone oxidoreductase core subunit V1
chr19	4060009;4061428	4061346;4062551	-	4060009;4061272	4061102;4062551	MXE	0.5	100	100	ENSMUST00000134479.8	ENSMUSG00000037916.15	Ndufv1	chr19	protein_coding	NADH:ubiquinone oxidoreductase core subunit V1
chr19	4061272;4061428	4061346;4062551	-	4061272	4062551	cassetteExon	0.5	100	100	ENSMUST00000134479.8	ENSMUSG00000037916.15	Ndufv1	chr19	protein_coding	NADH:ubiquinone oxidoreductase core subunit V1
chr19	4061424	4062551	-	4061428	4062551	A3SS	0.33	50	50	ENSMUST00000042497.14	ENSMUSG00000037916.15	Ndufv1	chr19	protein_coding	NADH:ubiquinone oxidoreductase core subunit V1
chr19	4061428	4062578	-	4061428	4062551	A5SS	0.25	50	50	ENSMUST00000042497.14	ENSMUSG00000037916.15	Ndufv1	chr19	protein_coding	NADH:ubiquinone oxidoreductase core subunit V1
chr19	4061428	4062657	-	4061428	4062551	A5SS	0.25	50	50	ENSMUST00000042497.14	ENSMUSG00000037916.15	Ndufv1	chr19	protein_coding	NADH:ubiquinone oxidoreductase core subunit V1
chr19	4060009	4061346	-	4061272	4061346	A3SS&ES	0.5	50	50	ENSMUST00000237129.2	ENSMUSG00000037916.15	Ndufv1	chr19	protein_coding	NADH:ubiquinone oxidoreductase core subunit V1
chr19	4061428	4062657	-	4061428	4062578	A5SS	0.25	50	50	ENSMUST00000128787.8	ENSMUSG00000037916.15	Ndufv1	chr19	protein_coding	NADH:ubiquinone oxidoreductase core subunit V1
chr19	4061272	4062551	-	4061428	4062551	A3SS	0.33	50	50	ENSMUST00000150852.2	ENSMUSG00000037916.15	Ndufv1	chr19	protein_coding	NADH:ubiquinone oxidoreductase core subunit V1
chr19	4060009	4061346	-	4060009	4061102	A5SS	0.5	50	50	ENSMUST00000150852.2	ENSMUSG00000037916.15	Ndufv1	chr19	protein_coding	NADH:ubiquinone oxidoreductase core subunit V1
chr19	4061272	4062551	-	4061424	4062551	A3SS	0.33	50	50	ENSMUST00000149482.2	ENSMUSG00000037916.15	Ndufv1	chr19	protein_coding	NADH:ubiquinone oxidoreductase core subunit V1
chr19	4087471	4087585	-	4087396	4087585	A3SS	0.5	50	50	ENSMUST00000169613.4	ENSMUSG00000060803.7	Gstp1	chr19	protein_coding	glutathione S-transferase, pi 1
chr19	4085931	4086279	-	4085931	4086688	A5SS	0.5	50	50	ENSMUST00000169613.4	ENSMUSG00000060803.7	Gstp1	chr19	protein_coding	glutathione S-transferase, pi 1
chr19	4087620	4087866	-	4087620	4087863	A5SS	0.5	50	50	ENSMUST00000169613.4	ENSMUSG00000060803.7	Gstp1	chr19	protein_coding	glutathione S-transferase, pi 1
chr19	4091485	4091903	-	4091485;4091690	4091584;4091903	ES	0.5	50	50	ENSMUST00000042700.12	ENSMUSG00000038155.12	Gstp2	chr19	protein_coding	glutathione S-transferase, pi 2
chr19	4091690	4092165	-	4091690;4091938	4091903;4092165	ES	0.5	50	50	ENSMUST00000042700.12	ENSMUSG00000038155.12	Gstp2	chr19	protein_coding	glutathione S-transferase, pi 2
chr19	4091938	4092567	-	4091938	4092165	5pMXE	0.33	50	50	ENSMUST00000042700.12	ENSMUSG00000038155.12	Gstp2	chr19	protein_coding	glutathione S-transferase, pi 2
chr19	4091938	4095924	-	4091938	4092165	5pMXE	0.33	50	50	ENSMUST00000042700.12	ENSMUSG00000038155.12	Gstp2	chr19	protein_coding	glutathione S-transferase, pi 2
chr19	4091938;4092671	4092567;4095924	-	4091938	4095924	cassetteExon	0.5	100	100	ENSMUST00000235381.2	ENSMUSG00000038155.12	Gstp2	chr19	protein_coding	glutathione S-transferase, pi 2
chr19	4091690	4092165	-	4091690	4091903	A5SS&ES	0.5	50	50	ENSMUST00000235657.2	ENSMUSG00000038155.12	Gstp2	chr19	protein_coding	glutathione S-transferase, pi 2
chr19	4091485;4091938	4091903;4092165	-	4091485;4091690	4091584;4092165	MXE	0.5	100	100	ENSMUST00000237999.2	ENSMUSG00000038155.12	Gstp2	chr19	protein_coding	glutathione S-transferase, pi 2
chr19	4108841	4109424	-	4108841;4109294	4109259;4109424	ES	0.5	50	50	ENSMUST00000189808.7	ENSMUSG00000058216.14	Gstp3	chr19	protein_coding	glutathione S-transferase pi 3
chr19	4108841	4109183	-	4108841	4109259	A5SS	0.33	50	50	ENSMUST00000189808.7	ENSMUSG00000058216.14	Gstp3	chr19	protein_coding	glutathione S-transferase pi 3
chr19	4108841	4109424	-	4108841	4109259	5pMXE	0.33	50	50	ENSMUST00000076451.7	ENSMUSG00000058216.14	Gstp3	chr19	protein_coding	glutathione S-transferase pi 3
chr19	4108841;4109294	4109183;4109424	-	4108841	4109424	cassetteExon	0.5	100	100	ENSMUST00000238086.2	ENSMUSG00000058216.14	Gstp3	chr19	protein_coding	glutathione S-transferase pi 3
chr19	4133616	4134878	+	4132867	4134878	A5SS	0.33	50	50	ENSMUST00000159593.8	ENSMUSG00000024857.17	Cabp2	chr19	protein_coding	calcium binding protein 2
chr19	4134245	4134878	+	4132867	4134878	A5SS	0.33	50	50	ENSMUST00000159593.8	ENSMUSG00000024857.17	Cabp2	chr19	protein_coding	calcium binding protein 2
chr19	4136595	4137216	+	4136595	4137111	A3SS	0.5	50	50	ENSMUST00000159148.8	ENSMUSG00000024857.17	Cabp2	chr19	protein_coding	calcium binding protein 2
chr19	4133616;4134245	4134087;4134878	+	4133616	4134878	cassetteExon	0.5	100	100	ENSMUST00000159556.8	ENSMUSG00000024857.17	Cabp2	chr19	protein_coding	calcium binding protein 2
chr19	4147733	4147817	+	4147507	4147817	A5SS	0.5	50	50	ENSMUST00000025779.11	ENSMUSG00000024856.11	Cdk2ap2	chr19	protein_coding	CDK2-associated protein 2
chr19	4147907	4148005	+	4147917	4148005	A5SS	0.5	50	50	ENSMUST00000025779.11	ENSMUSG00000024856.11	Cdk2ap2	chr19	protein_coding	CDK2-associated protein 2
chr19	4160659	4160948	+	4160659	4160842	A3SS	0.5	50	50	ENSMUST00000049658.14	ENSMUSG00000024851.15	Pitpnm1	chr19	protein_coding	phosphatidylinositol transfer protein, membrane-associated 1
chr19	4162510	4162662	+	4162510	4162748	A3SS	0.5	50	50	ENSMUST00000049658.14	ENSMUSG00000024851.15	Pitpnm1	chr19	protein_coding	phosphatidylinositol transfer protein, membrane-associated 1
chr19	4150514	4151144	+	4150213	4151144	A5SS	0.5	50	50	ENSMUST00000049658.14	ENSMUSG00000024851.15	Pitpnm1	chr19	protein_coding	phosphatidylinositol transfer protein, membrane-associated 1
chr19	4171545	4174439	-	4171545	4175730	A5SS	0.33	50	50	ENSMUST00000117831.8	ENSMUSG00000024847.16	Aip	chr19	protein_coding	aryl-hydrocarbon receptor-interacting protein
chr19	4171545	4175778	-	4171545	4175730	A5SS	0.33	50	50	ENSMUST00000117831.8	ENSMUSG00000024847.16	Aip	chr19	protein_coding	aryl-hydrocarbon receptor-interacting protein
chr19	4171545	4174439	-	4171545	4175778	A5SS	0.33	50	50	ENSMUST00000121402.2	ENSMUSG00000024847.16	Aip	chr19	protein_coding	aryl-hydrocarbon receptor-interacting protein
chr19	4177638	4181228	+	4177638;4177835	4177759;4181228	ES	0.25	50	50	ENSMUST00000169055.10	ENSMUSG00000024845.20	Tmem134	chr19	protein_coding	transmembrane protein 134
chr19	4177638;4181074	4181030;4181228	+	4177638;4177835	4177759;4181228	MXE	0.5	100	100	ENSMUST00000169055.10	ENSMUSG00000024845.20	Tmem134	chr19	protein_coding	transmembrane protein 134
chr19	4177835;4181074	4180856;4181228	+	4177835	4181228	cassetteExon	0.5	100	100	ENSMUST00000169055.10	ENSMUSG00000024845.20	Tmem134	chr19	protein_coding	transmembrane protein 134
chr19	4177835;4181074	4181030;4181228	+	4177835	4181228	cassetteExon	0.5	100	100	ENSMUST00000169055.10	ENSMUSG00000024845.20	Tmem134	chr19	protein_coding	transmembrane protein 134
chr19	4176199	4177576	+	4176199	4177056	A3SS&ES	0.5	50	50	ENSMUST00000169055.10	ENSMUSG00000024845.20	Tmem134	chr19	protein_coding	transmembrane protein 134
chr19	4177120	4177576	+	4177120	4177549	A3SS	0.5	50	50	ENSMUST00000169055.10	ENSMUSG00000024845.20	Tmem134	chr19	protein_coding	transmembrane protein 134
chr19	4177131	4177549	+	4177120	4177549	A5SS	0.5	50	50	ENSMUST00000169055.10	ENSMUSG00000024845.20	Tmem134	chr19	protein_coding	transmembrane protein 134
chr19	4177131	4181228	+	4177835	4181228	A5SS&ES	0.25	50	50	ENSMUST00000169055.10	ENSMUSG00000024845.20	Tmem134	chr19	protein_coding	transmembrane protein 134
chr19	4177638	4181030	+	4177638;4177835	4177759;4181030	ES	0.5	50	50	ENSMUST00000135257.11	ENSMUSG00000024845.20	Tmem134	chr19	protein_coding	transmembrane protein 134
chr19	4176199;4177120	4177056;4177576	+	4176199	4177576	cassetteExon	0.5	100	100	ENSMUST00000135257.11	ENSMUSG00000024845.20	Tmem134	chr19	protein_coding	transmembrane protein 134
chr19	4176199;4177131	4177056;4181228	+	4176199;4181074	4177576;4181228	MXE	0.5	100	100	ENSMUST00000135257.11	ENSMUSG00000024845.20	Tmem134	chr19	protein_coding	transmembrane protein 134
chr19	4177835	4180856	+	4177835	4181030	A3SS	0.33	50	50	ENSMUST00000135257.11	ENSMUSG00000024845.20	Tmem134	chr19	protein_coding	transmembrane protein 134
chr19	4177638	4181228	+	4177835	4181228	A5SS	0.25	50	50	ENSMUST00000139718.10	ENSMUSG00000024845.20	Tmem134	chr19	protein_coding	transmembrane protein 134
chr19	4177638	4181030	+	4177638	4177759	A3SS&ES	0.33	50	50	ENSMUST00000138593.10	ENSMUSG00000024845.20	Tmem134	chr19	protein_coding	transmembrane protein 134
chr19	4177131	4181228	+	4181074	4181228	A5SS&ES	0.25	50	50	ENSMUST00000138593.10	ENSMUSG00000024845.20	Tmem134	chr19	protein_coding	transmembrane protein 134
chr19	4176199;4177638	4177576;4181228	+	4176199;4177131	4177056;4181228	MXE	0.5	100	100	ENSMUST00000137579.6	ENSMUSG00000024845.20	Tmem134	chr19	protein_coding	transmembrane protein 134
chr19	4176199;4177835	4177576;4181228	+	4176199;4177131	4177056;4181228	MXE	0.5	100	100	ENSMUST00000137579.6	ENSMUSG00000024845.20	Tmem134	chr19	protein_coding	transmembrane protein 134
chr19	4177131;4177638	4177549;4181228	+	4177131	4181228	cassetteExon	0.5	100	100	ENSMUST00000137579.6	ENSMUSG00000024845.20	Tmem134	chr19	protein_coding	transmembrane protein 134
chr19	4177131;4177835	4177549;4181228	+	4177131	4181228	cassetteExon	0.5	100	100	ENSMUST00000137579.6	ENSMUSG00000024845.20	Tmem134	chr19	protein_coding	transmembrane protein 134
chr19	4177131;4177835	4177697;4181228	+	4177131	4181228	cassetteExon	0.5	100	100	ENSMUST00000137579.6	ENSMUSG00000024845.20	Tmem134	chr19	protein_coding	transmembrane protein 134
chr19	4177638	4181030	+	4177835	4181030	A5SS	0.5	50	50	ENSMUST00000130619.11	ENSMUSG00000024845.20	Tmem134	chr19	protein_coding	transmembrane protein 134
chr19	4177638	4181228	+	4181074	4181228	A5SS&ES	0.25	50	50	ENSMUST00000130619.11	ENSMUSG00000024845.20	Tmem134	chr19	protein_coding	transmembrane protein 134
chr19	4177638;4181074	4181030;4181228	+	4177638	4181228	cassetteExon	0.5	100	100	ENSMUST00000151401.11	ENSMUSG00000024845.20	Tmem134	chr19	protein_coding	transmembrane protein 134
chr19	4177131	4181228	+	4177638	4181228	A5SS&ES	0.25	50	50	ENSMUST00000151401.11	ENSMUSG00000024845.20	Tmem134	chr19	protein_coding	transmembrane protein 134
chr19	4177131	4177697	+	4177131	4177549	A3SS&ES	0.33	50	50	ENSMUST00000148807.11	ENSMUSG00000024845.20	Tmem134	chr19	protein_coding	transmembrane protein 134
chr19	4177131	4181228	+	4177131	4177697	3pMXE	0.33	50	50	ENSMUST00000153654.11	ENSMUSG00000024845.20	Tmem134	chr19	protein_coding	transmembrane protein 134
chr19	4187215	4188490	-	4187215	4188548	A5SS	0.5	50	50	ENSMUST00000025761.8	ENSMUSG00000024842.9	Cabp4	chr19	protein_coding	calcium binding protein 4
chr19	4199984	4200439	+	4199984;4200218	4200089;4200439	ES	0.5	50	50	ENSMUST00000123874.8	ENSMUSG00000024835.16	Coro1b	chr19	protein_coding	coronin, actin binding protein 1B
chr19	4198728	4199341	+	4198721	4199341	A5SS	0.33	50	50	ENSMUST00000123874.8	ENSMUSG00000024835.16	Coro1b	chr19	protein_coding	coronin, actin binding protein 1B
chr19	4198735	4199341	+	4198721	4199341	A5SS	0.33	50	50	ENSMUST00000123874.8	ENSMUSG00000024835.16	Coro1b	chr19	protein_coding	coronin, actin binding protein 1B
chr19	4198735	4199862	+	4199543	4199862	A5SS&ES	0.5	50	50	ENSMUST00000123874.8	ENSMUSG00000024835.16	Coro1b	chr19	protein_coding	coronin, actin binding protein 1B
chr19	4198735	4199862	+	4198735;4199543	4199341;4199862	ES	0.5	50	50	ENSMUST00000008893.9	ENSMUSG00000024835.16	Coro1b	chr19	protein_coding	coronin, actin binding protein 1B
chr19	4198728	4199341	+	4198735	4199341	A5SS	0.33	50	50	ENSMUST00000008893.9	ENSMUSG00000024835.16	Coro1b	chr19	protein_coding	coronin, actin binding protein 1B
chr19	4198735	4199862	+	4198735	4199341	3pMXE	0.5	50	50	ENSMUST00000142878.2	ENSMUSG00000024835.16	Coro1b	chr19	protein_coding	coronin, actin binding protein 1B
chr19	4199984	4200439	+	4199984	4200089	A3SS	0.5	50	50	ENSMUST00000236023.2	ENSMUSG00000024835.16	Coro1b	chr19	protein_coding	coronin, actin binding protein 1B
chr19	4204702	4205922	+	4204286	4205922	A5SS	0.5	50	50	ENSMUST00000236632.2	ENSMUSG00000045826.10	Ptprcap	chr19	protein_coding	protein tyrosine phosphatase, receptor type, C polypeptide-associated protein
chr19	4207198	4207681	-	4207198;4207593	4207481;4207681	ES	0.5	50	50	ENSMUST00000025749.15	ENSMUSG00000024830.18	Rps6kb2	chr19	protein_coding	ribosomal protein S6 kinase, polypeptide 2
chr19	4209092	4209402	-	4209092;4209326	4209226;4209402	ES	0.5	50	50	ENSMUST00000025749.15	ENSMUSG00000024830.18	Rps6kb2	chr19	protein_coding	ribosomal protein S6 kinase, polypeptide 2
chr19	4209326	4211067	-	4209326;4209459	4209402;4211067	ES	0.33	50	50	ENSMUST00000025749.15	ENSMUSG00000024830.18	Rps6kb2	chr19	protein_coding	ribosomal protein S6 kinase, polypeptide 2
chr19	4209459;4209704	4209565;4211067	-	4209459	4211067	cassetteExon	0.5	100	100	ENSMUST00000025749.15	ENSMUSG00000024830.18	Rps6kb2	chr19	protein_coding	ribosomal protein S6 kinase, polypeptide 2
chr19	4208362	4208609	-	4208127	4208609	A3SS	0.5	50	50	ENSMUST00000025749.15	ENSMUSG00000024830.18	Rps6kb2	chr19	protein_coding	ribosomal protein S6 kinase, polypeptide 2
chr19	4212717	4213167	-	4212861	4213167	A3SS&ES	0.5	50	50	ENSMUST00000025749.15	ENSMUSG00000024830.18	Rps6kb2	chr19	protein_coding	ribosomal protein S6 kinase, polypeptide 2
chr19	4208127	4208824	-	4208127	4208609	A5SS&ES	0.5	50	50	ENSMUST00000025749.15	ENSMUSG00000024830.18	Rps6kb2	chr19	protein_coding	ribosomal protein S6 kinase, polypeptide 2
chr19	4208716	4208802	-	4208716	4208828	A5SS	0.5	50	50	ENSMUST00000025749.15	ENSMUSG00000024830.18	Rps6kb2	chr19	protein_coding	ribosomal protein S6 kinase, polypeptide 2
chr19	4209092;4209326	4209226;4211067	-	4209092;4209459	4209402;4211067	MXE	0.5	100	100	ENSMUST00000135911.8	ENSMUSG00000024830.18	Rps6kb2	chr19	protein_coding	ribosomal protein S6 kinase, polypeptide 2
chr19	4209092;4209704	4209402;4211067	-	4209092;4209326	4209226;4211067	MXE	0.5	100	100	ENSMUST00000237691.2	ENSMUSG00000024830.18	Rps6kb2	chr19	protein_coding	ribosomal protein S6 kinase, polypeptide 2
chr19	4209326;4209704	4209402;4211067	-	4209326	4211067	cassetteExon	0.5	100	100	ENSMUST00000237691.2	ENSMUSG00000024830.18	Rps6kb2	chr19	protein_coding	ribosomal protein S6 kinase, polypeptide 2
chr19	4216563;4219807	4219355;4219898	-	4216563	4219898	cassetteExon	0.5	100	100	ENSMUST00000237815.2	ENSMUSG00000075289.6	Carns1	chr19	protein_coding	carnosine synthase 1
chr19	4216563;4219807	4219527;4219898	-	4216563	4219898	cassetteExon	0.5	100	100	ENSMUST00000237815.2	ENSMUSG00000075289.6	Carns1	chr19	protein_coding	carnosine synthase 1
chr19	4220070	4220825	-	4220129	4220825	A3SS	0.5	50	50	ENSMUST00000167055.2	ENSMUSG00000075289.6	Carns1	chr19	protein_coding	carnosine synthase 1
chr19	4216563	4219355	-	4216563	4219527	A5SS	0.33	50	50	ENSMUST00000167055.2	ENSMUSG00000075289.6	Carns1	chr19	protein_coding	carnosine synthase 1
chr19	4221169	4221613	-	4221169	4221411	A5SS	0.33	50	50	ENSMUST00000167055.2	ENSMUSG00000075289.6	Carns1	chr19	protein_coding	carnosine synthase 1
chr19	4221169	4221836	-	4221169	4221411	A5SS	0.33	50	50	ENSMUST00000167055.2	ENSMUSG00000075289.6	Carns1	chr19	protein_coding	carnosine synthase 1
chr19	4222234	4222624	-	4222234	4222958	A5SS	0.5	50	50	ENSMUST00000167055.2	ENSMUSG00000075289.6	Carns1	chr19	protein_coding	carnosine synthase 1
chr19	4216563	4219898	-	4216563	4219355	5pMXE	0.33	50	50	ENSMUST00000237326.2	ENSMUSG00000075289.6	Carns1	chr19	protein_coding	carnosine synthase 1
chr19	4221169	4221836	-	4221169	4221613	A5SS	0.33	50	50	ENSMUST00000235912.2	ENSMUSG00000075289.6	Carns1	chr19	protein_coding	carnosine synthase 1
chr19	4216563	4219898	-	4219807	4219898	3pMXE	0.5	50	50	ENSMUST00000235329.2	ENSMUSG00000117905.2	Gm50230	chr19	lncRNA	predicted gene, 50230
chr19	4238310	4239212	-	4238310;4239057	4238943;4239212	ES	0.33	50	50	ENSMUST00000235329.2	ENSMUSG00000117905.2	Gm50230	chr19	lncRNA	predicted gene, 50230
chr19	4238310;4238723	4238566;4238943	-	4238310	4238943	cassetteExon	0.5	100	100	ENSMUST00000235329.2	ENSMUSG00000117905.2	Gm50230	chr19	lncRNA	predicted gene, 50230
chr19	4238130	4238943	-	4238310	4238943	A3SS	0.25	50	50	ENSMUST00000235329.2	ENSMUSG00000117905.2	Gm50230	chr19	lncRNA	predicted gene, 50230
chr19	4239053	4239212	-	4239057	4239212	A3SS	0.33	50	50	ENSMUST00000235329.2	ENSMUSG00000117905.2	Gm50230	chr19	lncRNA	predicted gene, 50230
chr19	4223219	4225004	-	4223219	4234829	A5SS	0.5	50	50	ENSMUST00000235329.2	ENSMUSG00000117905.2	Gm50230	chr19	lncRNA	predicted gene, 50230
chr19	4235505	4237271	-	4235505	4237941	A5SS	0.33	50	50	ENSMUST00000235329.2	ENSMUSG00000117905.2	Gm50230	chr19	lncRNA	predicted gene, 50230
chr19	4235505	4238245	-	4235505	4237941	A5SS	0.33	50	50	ENSMUST00000235329.2	ENSMUSG00000117905.2	Gm50230	chr19	lncRNA	predicted gene, 50230
chr19	4235505;4238310	4238245;4238943	-	4235505;4238130	4237941;4238943	MXE	0.5	100	100	ENSMUST00000236780.2	ENSMUSG00000040247.7	Tbc1d10c	chr19	protein_coding	TBC1 domain family, member 10c
chr19	4238130;4238310	4238245;4238943	-	4238130	4238943	cassetteExon	0.5	100	100	ENSMUST00000236780.2	ENSMUSG00000040247.7	Tbc1d10c	chr19	protein_coding	TBC1 domain family, member 10c
chr19	4235505;4238310	4238245;4239212	-	4235505;4239053	4237941;4239212	MXE	0.5	100	100	ENSMUST00000236780.2	ENSMUSG00000040247.7	Tbc1d10c	chr19	protein_coding	TBC1 domain family, member 10c
chr19	4238130;4238310	4238245;4239212	-	4238130;4239053	4238943;4239212	MXE	0.5	100	100	ENSMUST00000236780.2	ENSMUSG00000040247.7	Tbc1d10c	chr19	protein_coding	TBC1 domain family, member 10c
chr19	4235505;4238723	4238245;4238943	-	4235505;4238130	4237941;4238943	MXE	0.5	100	100	ENSMUST00000236780.2	ENSMUSG00000040247.7	Tbc1d10c	chr19	protein_coding	TBC1 domain family, member 10c
chr19	4238130;4238723	4238245;4238943	-	4238130	4238943	cassetteExon	0.5	100	100	ENSMUST00000236780.2	ENSMUSG00000040247.7	Tbc1d10c	chr19	protein_coding	TBC1 domain family, member 10c
chr19	4235505	4238245	-	4235505;4238130	4237941;4238245	ES	0.33	50	50	ENSMUST00000235450.2	ENSMUSG00000040247.7	Tbc1d10c	chr19	protein_coding	TBC1 domain family, member 10c
chr19	4238079	4238245	-	4238130	4238245	A3SS	0.33	50	50	ENSMUST00000235450.2	ENSMUSG00000040247.7	Tbc1d10c	chr19	protein_coding	TBC1 domain family, member 10c
chr19	4235072	4238943	-	4235072	4235351	5pMXE	0.5	50	50	ENSMUST00000238094.2	ENSMUSG00000040247.7	Tbc1d10c	chr19	protein_coding	TBC1 domain family, member 10c
chr19	4235505	4238245	-	4235505	4237271	5pMXE	0.33	50	50	ENSMUST00000237206.2	ENSMUSG00000040247.7	Tbc1d10c	chr19	protein_coding	TBC1 domain family, member 10c
chr19	4235072;4239053	4238943;4239212	-	4235072;4238310	4235351;4239212	MXE	0.5	100	100	ENSMUST00000235782.2	ENSMUSG00000040247.7	Tbc1d10c	chr19	protein_coding	TBC1 domain family, member 10c
chr19	4238310;4239053	4238566;4239212	-	4238310	4239212	cassetteExon	0.5	100	100	ENSMUST00000235782.2	ENSMUSG00000040247.7	Tbc1d10c	chr19	protein_coding	TBC1 domain family, member 10c
chr19	4238310;4239053	4238943;4239212	-	4238310	4239212	cassetteExon	0.5	100	100	ENSMUST00000235782.2	ENSMUSG00000040247.7	Tbc1d10c	chr19	protein_coding	TBC1 domain family, member 10c
chr19	4235072;4239057	4238943;4239212	-	4235072;4238310	4235351;4239212	MXE	0.5	100	100	ENSMUST00000235782.2	ENSMUSG00000040247.7	Tbc1d10c	chr19	protein_coding	TBC1 domain family, member 10c
chr19	4238130;4239057	4238943;4239212	-	4238130;4238310	4238245;4239212	MXE	0.5	100	100	ENSMUST00000235782.2	ENSMUSG00000040247.7	Tbc1d10c	chr19	protein_coding	TBC1 domain family, member 10c
chr19	4238310;4239057	4238566;4239212	-	4238310	4239212	cassetteExon	0.5	100	100	ENSMUST00000235782.2	ENSMUSG00000040247.7	Tbc1d10c	chr19	protein_coding	TBC1 domain family, member 10c
chr19	4238130	4238943	-	4235072	4238943	A3SS	0.25	50	50	ENSMUST00000237495.2	ENSMUSG00000040247.7	Tbc1d10c	chr19	protein_coding	TBC1 domain family, member 10c
chr19	4238310	4238943	-	4235072	4238943	A3SS	0.25	50	50	ENSMUST00000237495.2	ENSMUSG00000040247.7	Tbc1d10c	chr19	protein_coding	TBC1 domain family, member 10c
chr19	4238310	4239212	-	4239053	4239212	A3SS&ES	0.33	50	50	ENSMUST00000237495.2	ENSMUSG00000040247.7	Tbc1d10c	chr19	protein_coding	TBC1 domain family, member 10c
chr19	4238723	4238943	-	4235072	4238943	A3SS	0.25	50	50	ENSMUST00000237495.2	ENSMUSG00000040247.7	Tbc1d10c	chr19	protein_coding	TBC1 domain family, member 10c
chr19	4235505	4238245	-	4235505;4238079	4237941;4238245	ES	0.33	50	50	ENSMUST00000045864.4	ENSMUSG00000040247.7	Tbc1d10c	chr19	protein_coding	TBC1 domain family, member 10c
chr19	4238310	4238943	-	4238723	4238943	A3SS	0.25	50	50	ENSMUST00000236719.2	ENSMUSG00000040247.7	Tbc1d10c	chr19	protein_coding	TBC1 domain family, member 10c
chr19	4238310	4239212	-	4239057	4239212	A3SS&ES	0.33	50	50	ENSMUST00000236719.2	ENSMUSG00000040247.7	Tbc1d10c	chr19	protein_coding	TBC1 domain family, member 10c
chr19	4242270	4242749	+	4242270	4242744	A3SS	0.5	50	50	ENSMUST00000046094.6	ENSMUSG00000040385.8	Ppp1ca	chr19	protein_coding	protein phosphatase 1 catalytic subunit alpha
chr19	4242484	4242744	+	4242270	4242744	A5SS	0.5	50	50	ENSMUST00000046094.6	ENSMUSG00000040385.8	Ppp1ca	chr19	protein_coding	protein phosphatase 1 catalytic subunit alpha
chr19	4251056;4251246	4251149;4251328	-	4251056	4251328	cassetteExon	0.5	100	100	ENSMUST00000025740.8	ENSMUSG00000024824.8	Rad9a	chr19	protein_coding	RAD9 checkpoint clamp component A
chr19	4250984	4251328	-	4251056	4251328	A3SS	0.33	50	50	ENSMUST00000025740.8	ENSMUSG00000024824.8	Rad9a	chr19	protein_coding	RAD9 checkpoint clamp component A
chr19	4251246	4251328	-	4250984	4251328	A3SS	0.33	50	50	ENSMUST00000235742.2	ENSMUSG00000024824.8	Rad9a	chr19	protein_coding	RAD9 checkpoint clamp component A
chr19	4270398	4282802	+	4270398	4272128	3pMXE	0.5	50	50	ENSMUST00000046506.7	ENSMUSG00000040663.10	Clcf1	chr19	protein_coding	cardiotrophin-like cytokine factor 1
chr19	4264554;4265884	4265787;4270232	+	4264554	4270232	cassetteExon	0.5	100	100	ENSMUST00000046506.7	ENSMUSG00000040663.10	Clcf1	chr19	protein_coding	cardiotrophin-like cytokine factor 1
chr19	4264686	4270232	+	4264554	4270232	A5SS	0.33	50	50	ENSMUST00000046506.7	ENSMUSG00000040663.10	Clcf1	chr19	protein_coding	cardiotrophin-like cytokine factor 1
chr19	4264554	4282517	+	4264554	4270232	3pMXE	0.33	50	50	ENSMUST00000132305.2	ENSMUSG00000040663.10	Clcf1	chr19	protein_coding	cardiotrophin-like cytokine factor 1
chr19	4264686	4270232	+	4265884	4270232	A5SS&ES	0.33	50	50	ENSMUST00000138090.2	ENSMUSG00000040663.10	Clcf1	chr19	protein_coding	cardiotrophin-like cytokine factor 1
chr19	4264554;4282606	4282517;4282802	+	4264554;4270398	4270232;4282802	MXE	0.5	100	100	ENSMUST00000236364.2	ENSMUSG00000117873.2	Gm45928	chr19	protein_coding	predicted gene, 45928
chr19	4264554	4265787	+	4264554	4282517	A3SS	0.33	50	50	ENSMUST00000237171.2	ENSMUSG00000117873.2	Gm45928	chr19	protein_coding	predicted gene, 45928
chr19	4282242	4282517	+	4264554	4282517	A5SS	0.5	50	50	ENSMUST00000237171.2	ENSMUSG00000117873.2	Gm45928	chr19	protein_coding	predicted gene, 45928
chr19	4270398	4282802	+	4282606	4282802	5pMXE	0.5	50	50	ENSMUST00000235306.2	ENSMUSG00000024854.5	Pold4	chr19	protein_coding	polymerase (DNA-directed), delta 4
chr19	4316200	4316550	-	4316200;4316474	4316403;4316550	ES	0.5	50	50	ENSMUST00000037992.16	ENSMUSG00000034616.18	Ssh3	chr19	protein_coding	slingshot protein phosphatase 3
chr19	4316665	4318573	-	4316665;4318006	4317775;4318573	ES	0.33	50	50	ENSMUST00000037992.16	ENSMUSG00000034616.18	Ssh3	chr19	protein_coding	slingshot protein phosphatase 3
chr19	4314012	4314342	-	4314136	4314342	A3SS	0.5	50	50	ENSMUST00000037992.16	ENSMUSG00000034616.18	Ssh3	chr19	protein_coding	slingshot protein phosphatase 3
chr19	4315743	4315838	-	4315731	4315838	A3SS	0.5	50	50	ENSMUST00000037992.16	ENSMUSG00000034616.18	Ssh3	chr19	protein_coding	slingshot protein phosphatase 3
chr19	4318002	4318573	-	4318006	4318573	A3SS	0.33	50	50	ENSMUST00000037992.16	ENSMUSG00000034616.18	Ssh3	chr19	protein_coding	slingshot protein phosphatase 3
chr19	4318610	4319043	-	4318613	4319043	A3SS	0.5	50	50	ENSMUST00000037992.16	ENSMUSG00000034616.18	Ssh3	chr19	protein_coding	slingshot protein phosphatase 3
chr19	4318006	4318211	-	4318006	4318573	A5SS	0.5	50	50	ENSMUST00000037992.16	ENSMUSG00000034616.18	Ssh3	chr19	protein_coding	slingshot protein phosphatase 3
chr19	4316665;4318002	4317775;4318573	-	4316665	4318573	cassetteExon	0.5	100	100	ENSMUST00000237501.2	ENSMUSG00000034616.18	Ssh3	chr19	protein_coding	slingshot protein phosphatase 3
chr19	4316665	4318573	-	4316665	4317775	A5SS	0.5	50	50	ENSMUST00000235815.2	ENSMUSG00000034616.18	Ssh3	chr19	protein_coding	slingshot protein phosphatase 3
chr19	4323130	4330565	-	4323130;4323630	4323564;4330565	ES	0.33	50	50	ENSMUST00000056888.13	ENSMUSG00000005986.17	Ankrd13d	chr19	protein_coding	ankyrin repeat domain 13 family, member D
chr19	4331108	4331946	-	4331108;4331236	4331191;4331946	ES	0.5	50	50	ENSMUST00000056888.13	ENSMUSG00000005986.17	Ankrd13d	chr19	protein_coding	ankyrin repeat domain 13 family, member D
chr19	4321153	4321247	-	4321157	4321247	A3SS	0.5	50	50	ENSMUST00000056888.13	ENSMUSG00000005986.17	Ankrd13d	chr19	protein_coding	ankyrin repeat domain 13 family, member D
chr19	4329812	4330565	-	4323630	4330565	A3SS	0.33	50	50	ENSMUST00000056888.13	ENSMUSG00000005986.17	Ankrd13d	chr19	protein_coding	ankyrin repeat domain 13 family, member D
chr19	4332062	4332197	-	4332070	4332197	A3SS	0.5	50	50	ENSMUST00000056888.13	ENSMUSG00000005986.17	Ankrd13d	chr19	protein_coding	ankyrin repeat domain 13 family, member D
chr19	4329812	4330565	-	4323130	4330565	A3SS	0.33	50	50	ENSMUST00000170283.2	ENSMUSG00000005986.17	Ankrd13d	chr19	protein_coding	ankyrin repeat domain 13 family, member D
chr19	4338013	4338620	-	4338013;4338535	4338440;4338620	ES	0.5	50	50	ENSMUST00000025791.12	ENSMUSG00000024858.15	Grk2	chr19	protein_coding	G protein-coupled receptor kinase 2
chr19	4344954	4355930	-	4344954;4355221	4355150;4355930	ES	0.5	50	50	ENSMUST00000025791.12	ENSMUSG00000024858.15	Grk2	chr19	protein_coding	G protein-coupled receptor kinase 2
chr19	4337651	4337851	-	4337722	4337851	A3SS	0.5	50	50	ENSMUST00000025791.12	ENSMUSG00000024858.15	Grk2	chr19	protein_coding	G protein-coupled receptor kinase 2
chr19	4340048	4340102	-	4340033	4340102	A3SS	0.5	50	50	ENSMUST00000025791.12	ENSMUSG00000024858.15	Grk2	chr19	protein_coding	G protein-coupled receptor kinase 2
chr19	4344954	4355064	-	4344954	4355150	A5SS	0.33	50	50	ENSMUST00000025791.12	ENSMUSG00000024858.15	Grk2	chr19	protein_coding	G protein-coupled receptor kinase 2
chr19	4344954;4355221	4355064;4355930	-	4344954	4355930	cassetteExon	0.5	100	100	ENSMUST00000113837.9	ENSMUSG00000024858.15	Grk2	chr19	protein_coding	G protein-coupled receptor kinase 2
chr19	4338013	4338620	-	4338535	4338620	3pMXE	0.5	50	50	ENSMUST00000168594.8	ENSMUSG00000024858.15	Grk2	chr19	protein_coding	G protein-coupled receptor kinase 2
chr19	4344954	4355930	-	4344954	4355064	5pMXE	0.33	50	50	ENSMUST00000167511.3	ENSMUSG00000024858.15	Grk2	chr19	protein_coding	G protein-coupled receptor kinase 2
chr19	4391482	4392875	-	4381297	4392875	A3SS	0.5	50	50	ENSMUST00000047898.14	ENSMUSG00000054611.18	Kdm2a	chr19	protein_coding	lysine (K)-specific demethylase 2A
chr19	4400333	4401765	-	4400358	4401765	A3SS	0.5	50	50	ENSMUST00000047898.14	ENSMUSG00000054611.18	Kdm2a	chr19	protein_coding	lysine (K)-specific demethylase 2A
chr19	4439085	4444820	-	4412942	4444820	A3SS	0.5	50	50	ENSMUST00000047898.14	ENSMUSG00000054611.18	Kdm2a	chr19	protein_coding	lysine (K)-specific demethylase 2A
chr19	4371084	4372411	-	4371084	4372415	A5SS	0.5	50	50	ENSMUST00000047898.14	ENSMUSG00000054611.18	Kdm2a	chr19	protein_coding	lysine (K)-specific demethylase 2A
chr19	4372578	4374814	-	4372578	4374365	A5SS	0.5	50	50	ENSMUST00000047898.14	ENSMUSG00000054611.18	Kdm2a	chr19	protein_coding	lysine (K)-specific demethylase 2A
chr19	4381297	4382469	-	4381297	4392875	A5SS	0.33	50	50	ENSMUST00000047898.14	ENSMUSG00000054611.18	Kdm2a	chr19	protein_coding	lysine (K)-specific demethylase 2A
chr19	4381297	4383671	-	4381297	4392875	A5SS	0.33	50	50	ENSMUST00000047898.14	ENSMUSG00000054611.18	Kdm2a	chr19	protein_coding	lysine (K)-specific demethylase 2A
chr19	4444920	4446339	-	4444920	4447962	A5SS	0.5	50	50	ENSMUST00000047898.14	ENSMUSG00000054611.18	Kdm2a	chr19	protein_coding	lysine (K)-specific demethylase 2A
chr19	4381297;4382513	4382469;4383671	-	4381297	4383671	cassetteExon	0.5	100	100	ENSMUST00000176653.2	ENSMUSG00000054611.18	Kdm2a	chr19	protein_coding	lysine (K)-specific demethylase 2A
chr19	4476284	4476505	-	4476284	4476655	A5SS	0.33	50	50	ENSMUST00000048197.10	ENSMUSG00000041845.12	Rhod	chr19	protein_coding	ras homolog family member D
chr19	4476284	4476608	-	4476284	4476655	A5SS	0.33	50	50	ENSMUST00000048197.10	ENSMUSG00000041845.12	Rhod	chr19	protein_coding	ras homolog family member D
chr19	4476284	4476505	-	4476284	4476608	A5SS	0.33	50	50	ENSMUST00000235680.2	ENSMUSG00000041845.12	Rhod	chr19	protein_coding	ras homolog family member D
chr19	4494066	4497553	+	4494066;4497454	4497325;4497553	ES	0.33	50	50	ENSMUST00000154407.8	ENSMUSG00000087132.9	A930001C03Rik	chr19	lncRNA	RIKEN cDNA A930001C03 gene
chr19	4489698	4493770	+	4489417	4493770	A5SS	0.5	50	50	ENSMUST00000154407.8	ENSMUSG00000087132.9	A930001C03Rik	chr19	lncRNA	RIKEN cDNA A930001C03 gene
chr19	4493816;4494066	4494031;4497553	+	4493816	4497553	cassetteExon	0.5	100	100	ENSMUST00000235289.2	ENSMUSG00000087132.9	A930001C03Rik	chr19	lncRNA	RIKEN cDNA A930001C03 gene
chr19	4497454	4497553	+	4493816	4497553	A5SS	0.33	50	50	ENSMUST00000235289.2	ENSMUSG00000087132.9	A930001C03Rik	chr19	lncRNA	RIKEN cDNA A930001C03 gene
chr19	4494066	4497553	+	4497454	4497553	5pMXE	0.33	50	50	ENSMUST00000136632.2	ENSMUSG00000087132.9	A930001C03Rik	chr19	lncRNA	RIKEN cDNA A930001C03 gene
chr19	4506915	4510694	-	4506915	4510645	A5SS	0.5	50	50	ENSMUST00000059295.10	ENSMUSG00000049303.11	Syt12	chr19	protein_coding	synaptotagmin XII
chr19	4565718;4590115	4589908;4651628	+	4565718	4651628	cassetteExon	0.5	100	100	ENSMUST00000068004.13	ENSMUSG00000024892.18	Pcx	chr19	protein_coding	pyruvate carboxylase
chr19	4565718	4580775	+	4565718	4651628	A3SS	0.33	50	50	ENSMUST00000068004.13	ENSMUSG00000024892.18	Pcx	chr19	protein_coding	pyruvate carboxylase
chr19	4608937	4651628	+	4565718	4651628	A5SS	0.2	50	50	ENSMUST00000068004.13	ENSMUSG00000024892.18	Pcx	chr19	protein_coding	pyruvate carboxylase
chr19	4644470	4651628	+	4565718	4651628	A5SS	0.2	50	50	ENSMUST00000068004.13	ENSMUSG00000024892.18	Pcx	chr19	protein_coding	pyruvate carboxylase
chr19	4644488	4651628	+	4565718	4651628	A5SS	0.2	50	50	ENSMUST00000068004.13	ENSMUSG00000024892.18	Pcx	chr19	protein_coding	pyruvate carboxylase
chr19	4565718	4589908	+	4565718	4580775	3pMXE	0.33	50	50	ENSMUST00000223659.2	ENSMUSG00000024892.18	Pcx	chr19	protein_coding	pyruvate carboxylase
chr19	4608937	4651628	+	4590115	4651628	A5SS	0.2	50	50	ENSMUST00000225189.3	ENSMUSG00000024892.18	Pcx	chr19	protein_coding	pyruvate carboxylase
chr19	4644470	4651628	+	4590115	4651628	A5SS	0.2	50	50	ENSMUST00000225189.3	ENSMUSG00000024892.18	Pcx	chr19	protein_coding	pyruvate carboxylase
chr19	4644488	4651628	+	4590115	4651628	A5SS	0.2	50	50	ENSMUST00000225189.3	ENSMUSG00000024892.18	Pcx	chr19	protein_coding	pyruvate carboxylase
chr19	4644470	4651628	+	4608937	4651628	A5SS	0.2	50	50	ENSMUST00000236457.2	ENSMUSG00000024892.18	Pcx	chr19	protein_coding	pyruvate carboxylase
chr19	4644488	4651628	+	4608937	4651628	A5SS	0.2	50	50	ENSMUST00000236457.2	ENSMUSG00000024892.18	Pcx	chr19	protein_coding	pyruvate carboxylase
chr19	4644488	4651628	+	4644470	4651628	A5SS	0.2	50	50	ENSMUST00000113825.4	ENSMUSG00000024892.18	Pcx	chr19	protein_coding	pyruvate carboxylase
chr19	4673270	4673854	-	4673270;4673591	4673529;4673854	ES	0.33	50	50	ENSMUST00000224707.2	ENSMUSG00000024889.6	Rce1	chr19	protein_coding	Ras converting CAAX endopeptidase 1
chr19	4673604	4673854	-	4673591	4673854	A3SS	0.33	50	50	ENSMUST00000224707.2	ENSMUSG00000024889.6	Rce1	chr19	protein_coding	Ras converting CAAX endopeptidase 1
chr19	4674179	4674713	-	4674209	4674713	A3SS	0.5	50	50	ENSMUST00000224707.2	ENSMUSG00000024889.6	Rce1	chr19	protein_coding	Ras converting CAAX endopeptidase 1
chr19	4675124	4675221	-	4675120	4675221	A3SS	0.5	50	50	ENSMUST00000224707.2	ENSMUSG00000024889.6	Rce1	chr19	protein_coding	Ras converting CAAX endopeptidase 1
chr19	4674209	4674688	-	4674209	4674713	A5SS	0.5	50	50	ENSMUST00000224707.2	ENSMUSG00000024889.6	Rce1	chr19	protein_coding	Ras converting CAAX endopeptidase 1
chr19	4673270;4673604	4673529;4673854	-	4673270	4673854	cassetteExon	0.5	100	100	ENSMUST00000237059.2	ENSMUSG00000024889.6	Rce1	chr19	protein_coding	Ras converting CAAX endopeptidase 1
chr19	4673270	4673854	-	4673591	4673854	3pMXE	0.33	50	50	ENSMUST00000225264.2	ENSMUSG00000024889.6	Rce1	chr19	protein_coding	Ras converting CAAX endopeptidase 1
chr19	4699847;4704221	4704147;4709455	-	4699847;4708483	4702153;4709455	MXE	0.5	100	100	ENSMUST00000225896.2	ENSMUSG00000071691.12	Gm960	chr19	protein_coding	predicted gene 960
chr19	4699506	4699701	-	4695749	4699701	A3SS	0.5	50	50	ENSMUST00000225896.2	ENSMUSG00000071691.12	Gm960	chr19	protein_coding	predicted gene 960
chr19	4709526	4710258	-	4709526	4710262	A5SS	0.5	50	50	ENSMUST00000225896.2	ENSMUSG00000071691.12	Gm960	chr19	protein_coding	predicted gene 960
chr19	4708483	4709455	-	4704221	4709455	A3SS	0.5	50	50	ENSMUST00000096325.5	ENSMUSG00000071691.12	Gm960	chr19	protein_coding	predicted gene 960
chr19	4699847	4702153	-	4699847	4704147	A5SS	0.5	50	50	ENSMUST00000096325.5	ENSMUSG00000071691.12	Gm960	chr19	protein_coding	predicted gene 960
chr19	4762489	4768847	+	4761672	4768847	A5SS	0.5	50	50	ENSMUST00000008991.8	ENSMUSG00000067889.8	Sptbn2	chr19	protein_coding	spectrin beta, non-erythrocytic 2
chr19	4771560	4774108	+	4769025	4774108	A5SS	0.5	50	50	ENSMUST00000008991.8	ENSMUSG00000067889.8	Sptbn2	chr19	protein_coding	spectrin beta, non-erythrocytic 2
chr19	4791871	4792361	+	4790027	4792361	A5SS	0.5	50	50	ENSMUST00000008991.8	ENSMUSG00000067889.8	Sptbn2	chr19	protein_coding	spectrin beta, non-erythrocytic 2
chr19	4844037;4851833	4851579;4861200	-	4844037	4861200	cassetteExon	0.5	100	100	ENSMUST00000178353.2	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4835595	4861200	-	4844037	4861200	A3SS&ES	0.16	50	50	ENSMUST00000178353.2	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4838070	4861200	-	4844037	4861200	A3SS&ES	0.16	50	50	ENSMUST00000178353.2	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4842848	4843844	-	4794895	4843844	A3SS	0.5	50	50	ENSMUST00000178353.2	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4842848	4861200	-	4844037	4861200	A3SS&ES	0.16	50	50	ENSMUST00000178353.2	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4854043	4861200	-	4844037	4861200	A3SS	0.16	50	50	ENSMUST00000178353.2	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4835595	4861200	-	4835595;4838070	4837389;4861200	ES	0.16	50	50	ENSMUST00000179909.8	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4835595;4842848	4842426;4861200	-	4835595;4838070	4837389;4861200	MXE	0.5	100	100	ENSMUST00000179909.8	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4838070;4842848	4842426;4861200	-	4838070	4861200	cassetteExon	0.5	100	100	ENSMUST00000179909.8	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4851833	4861200	-	4838070	4861200	A3SS	0.16	50	50	ENSMUST00000179909.8	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4854043	4861200	-	4838070	4861200	A3SS	0.16	50	50	ENSMUST00000179909.8	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4835595	4840185	-	4835595	4837389	A5SS&ES	0.25	50	50	ENSMUST00000179909.8	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4835595;4842848	4842426;4861200	-	4835595	4861200	cassetteExon	0.5	100	100	ENSMUST00000178404.2	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4838070	4861200	-	4835595	4861200	A3SS	0.16	50	50	ENSMUST00000178404.2	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4851833	4861200	-	4835595	4861200	A3SS	0.16	50	50	ENSMUST00000178404.2	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4854043	4861200	-	4835595	4861200	A3SS	0.16	50	50	ENSMUST00000178404.2	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4835595	4837389	-	4835595	4861200	A5SS	0.25	50	50	ENSMUST00000178404.2	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4835595	4840185	-	4835595	4861200	A5SS	0.25	50	50	ENSMUST00000178404.2	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4835595	4842426	-	4838070	4842426	3pMXE	0.33	50	50	ENSMUST00000172000.3	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4842848;4844037	4843700;4861200	-	4842848	4861200	cassetteExon	0.5	100	100	ENSMUST00000172000.3	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4842848;4844037	4843844;4861200	-	4842848	4861200	cassetteExon	0.5	100	100	ENSMUST00000172000.3	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4842848;4844037	4843855;4861200	-	4842848	4861200	cassetteExon	0.5	100	100	ENSMUST00000172000.3	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4842848;4844037	4843954;4861200	-	4842848	4861200	cassetteExon	0.5	100	100	ENSMUST00000172000.3	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4840338	4842426	-	4838070	4842426	A3SS	0.33	50	50	ENSMUST00000172000.3	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4851833	4861200	-	4842848	4861200	A3SS	0.2	50	50	ENSMUST00000172000.3	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4854043	4861200	-	4842848	4861200	A3SS	0.2	50	50	ENSMUST00000172000.3	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4842848	4843844	-	4842848	4843700	A5SS	0.2	50	50	ENSMUST00000178727.2	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4842848	4843855	-	4842848	4843700	A5SS	0.2	50	50	ENSMUST00000178727.2	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4842848	4843954	-	4842848	4843700	A5SS	0.2	50	50	ENSMUST00000178727.2	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4851833	4852579	-	4851833	4852000	5pMXE	0.33	50	50	ENSMUST00000177776.2	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4851833	4861200	-	4851833	4852000	5pMXE	0.33	50	50	ENSMUST00000177776.2	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4842848	4843844	-	4842848	4843954	A5SS	0.25	50	50	ENSMUST00000177776.2	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4842848	4843855	-	4842848	4843954	A5SS	0.25	50	50	ENSMUST00000177776.2	ENSMUSG00000096370.9	Gm21992	chr19	protein_coding	predicted gene 21992
chr19	4812675	4815372	+	4812675;4814599	4814378;4815372	ES	0.5	50	50	ENSMUST00000235278.2	ENSMUSG00000033760.18	Rbm4b	chr19	protein_coding	RNA binding motif protein 4B
chr19	4807697;4810310	4810041;4812005	+	4807697	4812005	cassetteExon	0.5	100	100	ENSMUST00000235278.2	ENSMUSG00000033760.18	Rbm4b	chr19	protein_coding	RNA binding motif protein 4B
chr19	4807697;4810310	4810045;4812005	+	4807697	4812005	cassetteExon	0.5	100	100	ENSMUST00000235278.2	ENSMUSG00000033760.18	Rbm4b	chr19	protein_coding	RNA binding motif protein 4B
chr19	4806979	4807274	+	4806689	4807274	A5SS	0.5	50	50	ENSMUST00000235278.2	ENSMUSG00000033760.18	Rbm4b	chr19	protein_coding	RNA binding motif protein 4B
chr19	4808147	4812005	+	4807697	4812005	A5SS	0.33	50	50	ENSMUST00000235278.2	ENSMUSG00000033760.18	Rbm4b	chr19	protein_coding	RNA binding motif protein 4B
chr19	4807697	4810041	+	4807697	4810045	A3SS	0.33	50	50	ENSMUST00000236160.2	ENSMUSG00000033760.18	Rbm4b	chr19	protein_coding	RNA binding motif protein 4B
chr19	4808147	4812005	+	4810310	4812005	A5SS&ES	0.33	50	50	ENSMUST00000236160.2	ENSMUSG00000033760.18	Rbm4b	chr19	protein_coding	RNA binding motif protein 4B
chr19	4807697	4812005	+	4807697	4810041	3pMXE	0.33	50	50	ENSMUST00000183008.2	ENSMUSG00000033760.18	Rbm4b	chr19	protein_coding	RNA binding motif protein 4B
chr19	4835595	4842426	-	4835595;4838070	4837389;4842426	ES	0.33	50	50	ENSMUST00000180248.8	ENSMUSG00000094936.9	Rbm4	chr19	protein_coding	RNA binding motif protein 4
chr19	4842848	4861200	-	4842848	4843700	5pMXE	0.2	50	50	ENSMUST00000180248.8	ENSMUSG00000094936.9	Rbm4	chr19	protein_coding	RNA binding motif protein 4
chr19	4835595;4840338	4840185;4842426	-	4835595;4838070	4837389;4842426	MXE	0.5	100	100	ENSMUST00000180248.8	ENSMUSG00000094936.9	Rbm4	chr19	protein_coding	RNA binding motif protein 4
chr19	4835595;4840338	4840185;4842426	-	4835595	4842426	cassetteExon	0.5	100	100	ENSMUST00000178615.8	ENSMUSG00000094936.9	Rbm4	chr19	protein_coding	RNA binding motif protein 4
chr19	4835595	4837389	-	4835595	4842426	A5SS	0.33	50	50	ENSMUST00000178615.8	ENSMUSG00000094936.9	Rbm4	chr19	protein_coding	RNA binding motif protein 4
chr19	4842848	4861200	-	4842848	4843844	5pMXE	0.2	50	50	ENSMUST00000164209.9	ENSMUSG00000094936.9	Rbm4	chr19	protein_coding	RNA binding motif protein 4
chr19	4842848	4843855	-	4842848	4843844	A5SS	0.2	50	50	ENSMUST00000164209.9	ENSMUSG00000094936.9	Rbm4	chr19	protein_coding	RNA binding motif protein 4
chr19	4842848	4861200	-	4842848	4843855	5pMXE	0.2	50	50	ENSMUST00000164376.3	ENSMUSG00000094936.9	Rbm4	chr19	protein_coding	RNA binding motif protein 4
chr19	4851833	4861200	-	4851833;4854043	4852579;4861200	ES	0.5	50	50	ENSMUST00000006625.8	ENSMUSG00000006456.11	Rbm14	chr19	protein_coding	RNA binding motif protein 14
chr19	4851833	4861200	-	4854043	4861200	A3SS	0.16	50	50	ENSMUST00000113793.4	ENSMUSG00000006456.11	Rbm14	chr19	protein_coding	RNA binding motif protein 14
chr19	4844037	4861200	-	4851833	4861200	3pMXE	0.16	50	50	ENSMUST00000180008.2	ENSMUSG00000006456.11	Rbm14	chr19	protein_coding	RNA binding motif protein 14
chr19	4851833	4852579	-	4851833	4861200	A5SS	0.33	50	50	ENSMUST00000180008.2	ENSMUSG00000006456.11	Rbm14	chr19	protein_coding	RNA binding motif protein 14
chr19	4883546	4888859	-	4883546;4884338	4884222;4888859	ES	0.5	50	50	ENSMUST00000236451.2	ENSMUSG00000034108.7	Ccs	chr19	protein_coding	copper chaperone for superoxide dismutase
chr19	4882921	4884201	-	4882921	4883369	A5SS&ES	0.5	50	50	ENSMUST00000236451.2	ENSMUSG00000034108.7	Ccs	chr19	protein_coding	copper chaperone for superoxide dismutase
chr19	4883546	4884201	-	4883546	4884222	A5SS	0.25	50	50	ENSMUST00000236451.2	ENSMUSG00000034108.7	Ccs	chr19	protein_coding	copper chaperone for superoxide dismutase
chr19	4883546	4884268	-	4883546	4884222	A5SS	0.25	50	50	ENSMUST00000236451.2	ENSMUSG00000034108.7	Ccs	chr19	protein_coding	copper chaperone for superoxide dismutase
chr19	4883546	4884268	-	4883475	4884268	A3SS	0.5	50	50	ENSMUST00000236178.2	ENSMUSG00000034108.7	Ccs	chr19	protein_coding	copper chaperone for superoxide dismutase
chr19	4883546	4888859	-	4884338	4888859	A3SS&ES	0.5	50	50	ENSMUST00000236178.2	ENSMUSG00000034108.7	Ccs	chr19	protein_coding	copper chaperone for superoxide dismutase
chr19	4882921	4884201	-	4882921;4883546	4883369;4884201	ES	0.5	50	50	ENSMUST00000037246.7	ENSMUSG00000034108.7	Ccs	chr19	protein_coding	copper chaperone for superoxide dismutase
chr19	4883546	4888859	-	4883546;4884338	4884201;4888859	ES	0.5	50	50	ENSMUST00000037246.7	ENSMUSG00000034108.7	Ccs	chr19	protein_coding	copper chaperone for superoxide dismutase
chr19	4883546	4884268	-	4883546	4884201	A5SS	0.25	50	50	ENSMUST00000037246.7	ENSMUSG00000034108.7	Ccs	chr19	protein_coding	copper chaperone for superoxide dismutase
chr19	4882921;4884338	4884201;4888859	-	4882921;4883546	4883369;4888859	MXE	0.5	100	100	ENSMUST00000235245.2	ENSMUSG00000034108.7	Ccs	chr19	protein_coding	copper chaperone for superoxide dismutase
chr19	4883546;4884338	4884268;4888859	-	4883546	4888859	cassetteExon	0.5	100	100	ENSMUST00000235245.2	ENSMUSG00000034108.7	Ccs	chr19	protein_coding	copper chaperone for superoxide dismutase
chr19	4906336	4906473	+	4906336	4906540	A3SS	0.5	50	50	ENSMUST00000119694.3	ENSMUSG00000083282.4	Ctsf	chr19	protein_coding	cathepsin F
chr19	4905836	4906098	+	4905824	4906098	A5SS	0.5	50	50	ENSMUST00000119694.3	ENSMUSG00000083282.4	Ctsf	chr19	protein_coding	cathepsin F
chr19	4909333	4909431	+	4908700	4909431	A5SS	0.5	50	50	ENSMUST00000119694.3	ENSMUSG00000083282.4	Ctsf	chr19	protein_coding	cathepsin F
chr19	4905824	4906540	+	4905824;4906336	4906098;4906540	ES	0.5	50	50	ENSMUST00000237755.2	ENSMUSG00000083282.4	Ctsf	chr19	protein_coding	cathepsin F
chr19	4905824	4906540	+	4905824	4906098	A3SS	0.5	50	50	ENSMUST00000236406.2	ENSMUSG00000083282.4	Ctsf	chr19	protein_coding	cathepsin F
chr19	4905824	4906540	+	4906336	4906540	5pMXE	0.5	50	50	ENSMUST00000237401.2	ENSMUSG00000083282.4	Ctsf	chr19	protein_coding	cathepsin F
chr19	4928833	4930149	+	4928764	4930149	A5SS	0.2	50	50	ENSMUST00000162088.8	ENSMUSG00000006463.14	Zdhhc24	chr19	protein_coding	zinc finger, DHHC domain containing 24
chr19	4929019	4930149	+	4928764	4930149	A5SS	0.2	50	50	ENSMUST00000162088.8	ENSMUSG00000006463.14	Zdhhc24	chr19	protein_coding	zinc finger, DHHC domain containing 24
chr19	4929055	4930149	+	4928764	4930149	A5SS	0.2	50	50	ENSMUST00000162088.8	ENSMUSG00000006463.14	Zdhhc24	chr19	protein_coding	zinc finger, DHHC domain containing 24
chr19	4929057	4930149	+	4928764	4930149	A5SS	0.2	50	50	ENSMUST00000162088.8	ENSMUSG00000006463.14	Zdhhc24	chr19	protein_coding	zinc finger, DHHC domain containing 24
chr19	4928833	4930149	+	4929057	4930149	A5SS	0.2	50	50	ENSMUST00000006632.8	ENSMUSG00000006463.14	Zdhhc24	chr19	protein_coding	zinc finger, DHHC domain containing 24
chr19	4929019	4930149	+	4929057	4930149	A5SS	0.2	50	50	ENSMUST00000006632.8	ENSMUSG00000006463.14	Zdhhc24	chr19	protein_coding	zinc finger, DHHC domain containing 24
chr19	4929055	4930149	+	4929057	4930149	A5SS	0.2	50	50	ENSMUST00000006632.8	ENSMUSG00000006463.14	Zdhhc24	chr19	protein_coding	zinc finger, DHHC domain containing 24
chr19	4929019	4930149	+	4928833	4930149	A5SS	0.2	50	50	ENSMUST00000162134.2	ENSMUSG00000006463.14	Zdhhc24	chr19	protein_coding	zinc finger, DHHC domain containing 24
chr19	4929055	4930149	+	4928833	4930149	A5SS	0.2	50	50	ENSMUST00000162134.2	ENSMUSG00000006463.14	Zdhhc24	chr19	protein_coding	zinc finger, DHHC domain containing 24
chr19	4929019	4930149	+	4929055	4930149	A5SS	0.2	50	50	ENSMUST00000162720.8	ENSMUSG00000006463.14	Zdhhc24	chr19	protein_coding	zinc finger, DHHC domain containing 24
chr19	4953080	4953730	-	4953080;4953220	4953174;4953730	ES	0.33	50	50	ENSMUST00000053506.8	ENSMUSG00000006464.10	Bbs1	chr19	protein_coding	Bardet-Biedl syndrome 1 (human)
chr19	4956246	4956382	-	4956246	4956584	A5SS	0.5	50	50	ENSMUST00000053506.8	ENSMUSG00000006464.10	Bbs1	chr19	protein_coding	Bardet-Biedl syndrome 1 (human)
chr19	4949334	4950519	-	4945059	4950519	A3SS	0.5	50	50	ENSMUST00000238170.2	ENSMUSG00000006464.10	Bbs1	chr19	protein_coding	Bardet-Biedl syndrome 1 (human)
chr19	4949334	4953730	-	4953220	4953730	A3SS&ES	0.33	50	50	ENSMUST00000238170.2	ENSMUSG00000006464.10	Bbs1	chr19	protein_coding	Bardet-Biedl syndrome 1 (human)
chr19	4945059	4947308	-	4945059	4950519	A5SS	0.5	50	50	ENSMUST00000238170.2	ENSMUSG00000006464.10	Bbs1	chr19	protein_coding	Bardet-Biedl syndrome 1 (human)
chr19	4953080	4953730	-	4949334	4953730	A3SS	0.33	50	50	ENSMUST00000237085.2	ENSMUSG00000006464.10	Bbs1	chr19	protein_coding	Bardet-Biedl syndrome 1 (human)
chr19	4949334	4950519	-	4949334	4953730	A5SS	0.5	50	50	ENSMUST00000237085.2	ENSMUSG00000006464.10	Bbs1	chr19	protein_coding	Bardet-Biedl syndrome 1 (human)
chr19	4963898	4964608	-	4963980	4964608	A3SS	0.5	50	50	ENSMUST00000025851.4	ENSMUSG00000063904.5	Dpp3	chr19	protein_coding	dipeptidylpeptidase 3
chr19	4972367	4973712	-	4973232	4973712	A3SS&ES	0.5	50	50	ENSMUST00000025851.4	ENSMUSG00000063904.5	Dpp3	chr19	protein_coding	dipeptidylpeptidase 3
chr19	4971262	4972190	-	4971262	4972350	A5SS	0.5	50	50	ENSMUST00000025851.4	ENSMUSG00000063904.5	Dpp3	chr19	protein_coding	dipeptidylpeptidase 3
chr19	4977087	4977976	-	4977087	4978248	A5SS	0.33	50	50	ENSMUST00000025851.4	ENSMUSG00000063904.5	Dpp3	chr19	protein_coding	dipeptidylpeptidase 3
chr19	4977087	4978091	-	4977087	4978248	A5SS	0.33	50	50	ENSMUST00000025851.4	ENSMUSG00000063904.5	Dpp3	chr19	protein_coding	dipeptidylpeptidase 3
chr19	4977087	4977976	-	4977087	4978091	A5SS	0.33	50	50	ENSMUST00000237394.2	ENSMUSG00000063904.5	Dpp3	chr19	protein_coding	dipeptidylpeptidase 3
chr19	4985125	4988077	-	4985125;4986247	4986146;4988077	ES	0.5	50	50	ENSMUST00000025834.15	ENSMUSG00000024901.16	Peli3	chr19	protein_coding	pellino 3
chr19	4988206	4993017	-	4988206	4991788	A5SS&ES	0.5	50	50	ENSMUST00000025834.15	ENSMUSG00000024901.16	Peli3	chr19	protein_coding	pellino 3
chr19	4991940	4993017	-	4991940	4992966	A5SS	0.5	50	50	ENSMUST00000025834.15	ENSMUSG00000024901.16	Peli3	chr19	protein_coding	pellino 3
chr19	4985125	4991788	-	4985125;4988206	4988077;4991788	ES	0.5	50	50	ENSMUST00000120475.8	ENSMUSG00000024901.16	Peli3	chr19	protein_coding	pellino 3
chr19	4988206	4993017	-	4988206;4991940	4991788;4993017	ES	0.5	50	50	ENSMUST00000120475.8	ENSMUSG00000024901.16	Peli3	chr19	protein_coding	pellino 3
chr19	4985125	4986146	-	4985125	4991788	A5SS	0.33	50	50	ENSMUST00000146289.2	ENSMUSG00000024901.16	Peli3	chr19	protein_coding	pellino 3
chr19	4985125;4991940	4991788;4993017	-	4985125;4988206	4986146;4993017	MXE	0.5	100	100	ENSMUST00000133504.2	ENSMUSG00000024901.16	Peli3	chr19	protein_coding	pellino 3
chr19	5012543	5012928	+	5012543	5012907	A3SS	0.5	50	50	ENSMUST00000025836.6	ENSMUSG00000024902.6	Mrpl11	chr19	protein_coding	mitochondrial ribosomal protein L11
chr19	5013002	5013411	+	5013002	5013354	A3SS	0.5	50	50	ENSMUST00000025836.6	ENSMUSG00000024902.6	Mrpl11	chr19	protein_coding	mitochondrial ribosomal protein L11
chr19	5013717	5014702	+	5013693	5014702	A5SS	0.5	50	50	ENSMUST00000025836.6	ENSMUSG00000024902.6	Mrpl11	chr19	protein_coding	mitochondrial ribosomal protein L11
chr19	5037478	5038103	-	5037478;5037915	5037806;5038103	ES	0.5	50	50	ENSMUST00000056129.9	ENSMUSG00000045903.10	Npas4	chr19	protein_coding	neuronal PAS domain protein 4
chr19	5074620	5076065	+	5074620	5076056	A3SS	0.5	50	50	ENSMUST00000236152.2	ENSMUSG00000024891.7	Slc29a2	chr19	protein_coding	solute carrier family 29 (nucleoside transporters), member 2
chr19	5079522	5080320	+	5079522	5080316	A3SS	0.5	50	50	ENSMUST00000236152.2	ENSMUSG00000024891.7	Slc29a2	chr19	protein_coding	solute carrier family 29 (nucleoside transporters), member 2
chr19	5074310	5074539	+	5074305	5074539	A5SS	0.5	50	50	ENSMUST00000236152.2	ENSMUSG00000024891.7	Slc29a2	chr19	protein_coding	solute carrier family 29 (nucleoside transporters), member 2
chr19	5096939	5097174	+	5096939	5097420	A3SS	0.5	50	50	ENSMUST00000236560.2	ENSMUSG00000117789.2	Gm50388	chr19	protein_coding	predicted gene, 50388
chr19	5091639	5095921	+	5091518	5095921	A5SS	0.5	50	50	ENSMUST00000236560.2	ENSMUSG00000117789.2	Gm50388	chr19	protein_coding	predicted gene, 50388
chr19	5101282	5101586	+	5101282;5101496	5101382;5101586	ES	0.5	50	50	ENSMUST00000225427.2	ENSMUSG00000024883.9	Rin1	chr19	protein_coding	Ras and Rab interactor 1
chr19	5100969	5101113	+	5100969	5101102	A3SS	0.33	50	50	ENSMUST00000225427.2	ENSMUSG00000024883.9	Rin1	chr19	protein_coding	Ras and Rab interactor 1
chr19	5100969	5101229	+	5100969	5101102	A3SS	0.33	50	50	ENSMUST00000225427.2	ENSMUSG00000024883.9	Rin1	chr19	protein_coding	Ras and Rab interactor 1
chr19	5101658	5101769	+	5101658	5101802	A3SS	0.5	50	50	ENSMUST00000225427.2	ENSMUSG00000024883.9	Rin1	chr19	protein_coding	Ras and Rab interactor 1
chr19	5100899	5101102	+	5100969	5101102	A5SS	0.5	50	50	ENSMUST00000225427.2	ENSMUSG00000024883.9	Rin1	chr19	protein_coding	Ras and Rab interactor 1
chr19	5100899	5101229	+	5100899	5101102	A3SS	0.5	50	50	ENSMUST00000224254.2	ENSMUSG00000024883.9	Rin1	chr19	protein_coding	Ras and Rab interactor 1
chr19	5100969	5101113	+	5100969	5101229	A3SS	0.33	50	50	ENSMUST00000225203.2	ENSMUSG00000024883.9	Rin1	chr19	protein_coding	Ras and Rab interactor 1
chr19	5100899	5101229	+	5100969	5101229	A5SS	0.5	50	50	ENSMUST00000225203.2	ENSMUSG00000024883.9	Rin1	chr19	protein_coding	Ras and Rab interactor 1
chr19	5101282	5101586	+	5101496	5101586	A5SS	0.5	50	50	ENSMUST00000224363.2	ENSMUSG00000024883.9	Rin1	chr19	protein_coding	Ras and Rab interactor 1
chr19	5101282	5101586	+	5101282	5101382	3pMXE	0.5	50	50	ENSMUST00000236248.2	ENSMUSG00000024883.9	Rin1	chr19	protein_coding	Ras and Rab interactor 1
chr19	5121922	5122697	-	5121922	5122021	5pMXE	0.33	50	50	ENSMUST00000143677.2	ENSMUSG00000061451.14	Tmem151a	chr19	protein_coding	transmembrane protein 151A
chr19	5121922	5135326	-	5121922	5122021	5pMXE	0.33	50	50	ENSMUST00000143677.2	ENSMUSG00000061451.14	Tmem151a	chr19	protein_coding	transmembrane protein 151A
chr19	5121922;5122798	5122697;5135326	-	5121922	5135326	cassetteExon	0.5	100	100	ENSMUST00000140389.8	ENSMUSG00000061451.14	Tmem151a	chr19	protein_coding	transmembrane protein 151A
chr19	5133129	5135326	-	5121922	5135326	A3SS	0.33	50	50	ENSMUST00000140389.8	ENSMUSG00000061451.14	Tmem151a	chr19	protein_coding	transmembrane protein 151A
chr19	5133129	5135326	-	5122798	5135326	A3SS	0.33	50	50	ENSMUST00000151413.2	ENSMUSG00000061451.14	Tmem151a	chr19	protein_coding	transmembrane protein 151A
chr19	5133129	5134844	-	5133129	5135326	A5SS	0.5	50	50	ENSMUST00000077066.8	ENSMUSG00000061451.14	Tmem151a	chr19	protein_coding	transmembrane protein 151A
chr19	5141453	5142157	+	5141453;5141724	5141569;5142157	ES	0.5	50	50	ENSMUST00000237603.2	ENSMUSG00000024875.6	Yif1a	chr19	protein_coding	Yip1 interacting factor homolog A (S. cerevisiae)
chr19	5141724	5142330	+	5141724;5142250	5142157;5142330	ES	0.5	50	50	ENSMUST00000237603.2	ENSMUSG00000024875.6	Yif1a	chr19	protein_coding	Yip1 interacting factor homolog A (S. cerevisiae)
chr19	5139904;5140110	5140032;5141396	+	5139904	5141396	cassetteExon	0.5	100	100	ENSMUST00000237603.2	ENSMUSG00000024875.6	Yif1a	chr19	protein_coding	Yip1 interacting factor homolog A (S. cerevisiae)
chr19	5139225	5139447	+	5138776	5139447	A5SS	0.5	50	50	ENSMUST00000237603.2	ENSMUSG00000024875.6	Yif1a	chr19	protein_coding	Yip1 interacting factor homolog A (S. cerevisiae)
chr19	5141453;5142250	5142157;5142330	+	5141453;5141724	5141569;5142330	MXE	0.5	100	100	ENSMUST00000238093.2	ENSMUSG00000024875.6	Yif1a	chr19	protein_coding	Yip1 interacting factor homolog A (S. cerevisiae)
chr19	5139904	5141396	+	5139904	5140032	3pMXE	0.5	50	50	ENSMUST00000235773.2	ENSMUSG00000024875.6	Yif1a	chr19	protein_coding	Yip1 interacting factor homolog A (S. cerevisiae)
chr19	5144359	5144734	-	5144359	5144760	A5SS	0.5	50	50	ENSMUST00000025805.8	ENSMUSG00000024873.8	Cnih2	chr19	protein_coding	cornichon family AMPA receptor auxiliary protein 2
chr19	5150600	5150752	-	5150600	5150695	A5SS	0.5	50	50	ENSMUST00000025804.7	ENSMUSG00000024870.7	Rab1b	chr19	protein_coding	RAB1B, member RAS oncogene family
chr19	5155278	5156009	-	5155278	5156953	A5SS	0.5	50	50	ENSMUST00000025804.7	ENSMUSG00000024870.7	Rab1b	chr19	protein_coding	RAB1B, member RAS oncogene family
chr19	5160292	5160395	-	5160286	5160395	A3SS	0.5	50	50	ENSMUST00000113728.8	ENSMUSG00000024862.17	Klc2	chr19	protein_coding	kinesin light chain 2
chr19	5167497	5168212	-	5167460	5168212	A3SS	0.5	50	50	ENSMUST00000113728.8	ENSMUSG00000024862.17	Klc2	chr19	protein_coding	kinesin light chain 2
chr19	5167460	5168150	-	5167460	5168212	A5SS	0.5	50	50	ENSMUST00000113728.8	ENSMUSG00000024862.17	Klc2	chr19	protein_coding	kinesin light chain 2
chr19	5167460	5168150	-	5167497	5168150	A3SS	0.5	50	50	ENSMUST00000025798.13	ENSMUSG00000024862.17	Klc2	chr19	protein_coding	kinesin light chain 2
chr19	5167497	5168212	-	5167497	5168150	A5SS	0.5	50	50	ENSMUST00000025798.13	ENSMUSG00000024862.17	Klc2	chr19	protein_coding	kinesin light chain 2
chr19	5210835;5212352	5212277;5217952	-	5210835	5217952	cassetteExon	0.5	100	100	ENSMUST00000025786.9	ENSMUSG00000024855.11	Pacs1	chr19	protein_coding	phosphofurin acidic cluster sorting protein 1
chr19	5338438	5341333	-	5338441	5341333	A3SS	0.5	50	50	ENSMUST00000025774.11	ENSMUSG00000024853.11	Sf3b2	chr19	protein_coding	splicing factor 3b, subunit 2
chr19	5356161	5357296	-	5356161	5356948	5pMXE	0.5	50	50	ENSMUST00000235862.2	ENSMUSG00000118263.2	Gm42064	chr19	lncRNA	predicted gene, 42064
chr19	5387863	5389020	+	5387863;5388855	5388742;5389020	ES	0.5	50	50	ENSMUST00000043380.5	ENSMUSG00000038498.5	Catsper1	chr19	protein_coding	cation channel, sperm associated 1
chr19	5398550;5398756	5398675;5399123	-	5398550	5399123	cassetteExon	0.5	100	100	ENSMUST00000025764.6	ENSMUSG00000024846.7	Cst6	chr19	protein_coding	cystatin E/M
chr19	5415186	5416596	-	5415186;5415984	5415846;5416596	ES	0.5	50	50	ENSMUST00000025762.16	ENSMUSG00000024844.16	Banf1	chr19	protein_coding	BAF nuclear assembly factor 1
chr19	5415984	5416291	-	5415984	5416596	A5SS	0.33	50	50	ENSMUST00000025762.16	ENSMUSG00000024844.16	Banf1	chr19	protein_coding	BAF nuclear assembly factor 1
chr19	5415984	5416462	-	5415984	5416596	A5SS	0.33	50	50	ENSMUST00000025762.16	ENSMUSG00000024844.16	Banf1	chr19	protein_coding	BAF nuclear assembly factor 1
chr19	5415984	5416462	-	5415984	5416291	5pMXE	0.33	50	50	ENSMUST00000170010.3	ENSMUSG00000024844.16	Banf1	chr19	protein_coding	BAF nuclear assembly factor 1
chr19	5415186	5416596	-	5415186	5415846	A5SS&ES	0.5	50	50	ENSMUST00000237167.2	ENSMUSG00000024844.16	Banf1	chr19	protein_coding	BAF nuclear assembly factor 1
chr19	5417238	5418450	+	5417238;5418304	5418086;5418450	ES	0.5	50	50	ENSMUST00000025759.9	ENSMUSG00000024841.9	Eif1ad	chr19	protein_coding	eukaryotic translation initiation factor 1A domain containing
chr19	5417238	5418450	+	5417238	5418086	A3SS	0.5	50	50	ENSMUST00000236059.2	ENSMUSG00000024841.9	Eif1ad	chr19	protein_coding	eukaryotic translation initiation factor 1A domain containing
chr19	5435897	5437868	-	5435897	5438343	A5SS	0.5	50	50	ENSMUST00000044207.5	ENSMUSG00000039148.6	Sart1	chr19	protein_coding	squamous cell carcinoma antigen recognized by T cells 1
chr19	5457111	5465635	+	5457111;5465140	5465040;5465635	ES	0.33	50	50	ENSMUST00000174754.9	ENSMUSG00000086938.10	4930481A15Rik	chr19	lncRNA	RIKEN cDNA 4930481A15 gene
chr19	5457111	5465036	+	5457111	5465040	A3SS	0.33	50	50	ENSMUST00000174754.9	ENSMUSG00000086938.10	4930481A15Rik	chr19	lncRNA	RIKEN cDNA 4930481A15 gene
chr19	5465127	5465635	+	5465140	5465635	A5SS	0.33	50	50	ENSMUST00000174754.9	ENSMUSG00000086938.10	4930481A15Rik	chr19	lncRNA	RIKEN cDNA 4930481A15 gene
chr19	5457111	5465635	+	5457111;5465127	5465036;5465635	ES	0.33	50	50	ENSMUST00000174412.8	ENSMUSG00000086938.10	4930481A15Rik	chr19	lncRNA	RIKEN cDNA 4930481A15 gene
chr19	5457111;5465140	5465036;5465635	+	5457111	5465635	cassetteExon	0.5	100	100	ENSMUST00000153017.7	ENSMUSG00000086938.10	4930481A15Rik	chr19	lncRNA	RIKEN cDNA 4930481A15 gene
chr19	5457111;5465127	5465040;5465635	+	5457111	5465635	cassetteExon	0.5	100	100	ENSMUST00000153017.7	ENSMUSG00000086938.10	4930481A15Rik	chr19	lncRNA	RIKEN cDNA 4930481A15 gene
chr19	5467494	5472149	+	5468279	5472149	A5SS	0.5	50	50	ENSMUST00000128542.3	ENSMUSG00000086938.10	4930481A15Rik	chr19	lncRNA	RIKEN cDNA 4930481A15 gene
chr19	5473003	5473359	-	5473053	5473359	A3SS	0.5	50	50	ENSMUST00000124478.8	ENSMUSG00000024914.17	Drap1	chr19	protein_coding	Dr1 associated protein 1 (negative cofactor 2 alpha)
chr19	5473702	5473800	-	5473681	5473800	A3SS	0.5	50	50	ENSMUST00000148219.9	ENSMUSG00000024914.17	Drap1	chr19	protein_coding	Dr1 associated protein 1 (negative cofactor 2 alpha)
chr19	5475336	5475965	+	5475336	5475979	A3SS	0.5	50	50	ENSMUST00000159759.3	ENSMUSG00000047423.11	AI837181	chr19	protein_coding	expressed sequence AI837181
chr19	5513332	5513632	+	5513332	5513549	A3SS	0.5	50	50	ENSMUST00000237181.2	ENSMUSG00000024911.8	Fibp	chr19	protein_coding	fibroblast growth factor (acidic) intracellular binding protein
chr19	5513353	5513632	+	5513332	5513632	A5SS	0.5	50	50	ENSMUST00000225917.2	ENSMUSG00000024911.8	Fibp	chr19	protein_coding	fibroblast growth factor (acidic) intracellular binding protein
chr19	5516138	5516259	-	5516173	5516259	A3SS	0.5	50	50	ENSMUST00000235502.2	ENSMUSG00000024910.6	Ctsw	chr19	protein_coding	cathepsin W
chr19	5516513	5516696	-	5516513	5516609	A5SS	0.5	50	50	ENSMUST00000235502.2	ENSMUSG00000024910.6	Ctsw	chr19	protein_coding	cathepsin W
chr19	5526300	5527955	+	5526300;5527712	5527590;5527955	ES	0.33	50	50	ENSMUST00000166303.9	ENSMUSG00000024909.16	Efemp2	chr19	protein_coding	epidermal growth factor-containing fibulin-like extracellular matrix protein 2
chr19	5527712	5528229	+	5527712;5528071	5527955;5528229	ES	0.5	50	50	ENSMUST00000166303.9	ENSMUSG00000024909.16	Efemp2	chr19	protein_coding	epidermal growth factor-containing fibulin-like extracellular matrix protein 2
chr19	5525484	5526048	+	5525484	5526094	A3SS	0.33	50	50	ENSMUST00000166303.9	ENSMUSG00000024909.16	Efemp2	chr19	protein_coding	epidermal growth factor-containing fibulin-like extracellular matrix protein 2
chr19	5530388	5530617	+	5530388	5530574	A3SS	0.5	50	50	ENSMUST00000166303.9	ENSMUSG00000024909.16	Efemp2	chr19	protein_coding	epidermal growth factor-containing fibulin-like extracellular matrix protein 2
chr19	5524351	5525089	+	5524481	5525089	A5SS	0.25	50	50	ENSMUST00000166303.9	ENSMUSG00000024909.16	Efemp2	chr19	protein_coding	epidermal growth factor-containing fibulin-like extracellular matrix protein 2
chr19	5524423	5525089	+	5524481	5525089	A5SS	0.25	50	50	ENSMUST00000166303.9	ENSMUSG00000024909.16	Efemp2	chr19	protein_coding	epidermal growth factor-containing fibulin-like extracellular matrix protein 2
chr19	5524802	5525089	+	5524481	5525089	A5SS	0.25	50	50	ENSMUST00000166303.9	ENSMUSG00000024909.16	Efemp2	chr19	protein_coding	epidermal growth factor-containing fibulin-like extracellular matrix protein 2
chr19	5526300	5527955	+	5526300	5527590	3pMXE	0.5	50	50	ENSMUST00000167304.8	ENSMUSG00000024909.16	Efemp2	chr19	protein_coding	epidermal growth factor-containing fibulin-like extracellular matrix protein 2
chr19	5524423	5525089	+	5524351	5525089	A5SS	0.25	50	50	ENSMUST00000167304.8	ENSMUSG00000024909.16	Efemp2	chr19	protein_coding	epidermal growth factor-containing fibulin-like extracellular matrix protein 2
chr19	5524802	5525089	+	5524351	5525089	A5SS	0.25	50	50	ENSMUST00000167304.8	ENSMUSG00000024909.16	Efemp2	chr19	protein_coding	epidermal growth factor-containing fibulin-like extracellular matrix protein 2
chr19	5524802	5525089	+	5524423	5525089	A5SS	0.25	50	50	ENSMUST00000235523.2	ENSMUSG00000024909.16	Efemp2	chr19	protein_coding	epidermal growth factor-containing fibulin-like extracellular matrix protein 2
chr19	5524802	5525180	+	5524802	5525089	A3SS	0.5	50	50	ENSMUST00000165485.8	ENSMUSG00000024909.16	Efemp2	chr19	protein_coding	epidermal growth factor-containing fibulin-like extracellular matrix protein 2
chr19	5525484;5526300	5526048;5527955	+	5525484	5527955	cassetteExon	0.5	100	100	ENSMUST00000166253.8	ENSMUSG00000024909.16	Efemp2	chr19	protein_coding	epidermal growth factor-containing fibulin-like extracellular matrix protein 2
chr19	5525484;5526300	5526094;5527955	+	5525484	5527955	cassetteExon	0.5	100	100	ENSMUST00000166253.8	ENSMUSG00000024909.16	Efemp2	chr19	protein_coding	epidermal growth factor-containing fibulin-like extracellular matrix protein 2
chr19	5527712	5527955	+	5525484	5527955	A5SS	0.33	50	50	ENSMUST00000166253.8	ENSMUSG00000024909.16	Efemp2	chr19	protein_coding	epidermal growth factor-containing fibulin-like extracellular matrix protein 2
chr19	5527712	5528229	+	5528071	5528229	A5SS&ES	0.5	50	50	ENSMUST00000166253.8	ENSMUSG00000024909.16	Efemp2	chr19	protein_coding	epidermal growth factor-containing fibulin-like extracellular matrix protein 2
chr19	5526300;5527712	5527590;5528229	+	5526300;5528071	5527955;5528229	MXE	0.5	100	100	ENSMUST00000167371.8	ENSMUSG00000024909.16	Efemp2	chr19	protein_coding	epidermal growth factor-containing fibulin-like extracellular matrix protein 2
chr19	5525484	5527955	+	5525484	5526094	A3SS&ES	0.33	50	50	ENSMUST00000236109.2	ENSMUSG00000024909.16	Efemp2	chr19	protein_coding	epidermal growth factor-containing fibulin-like extracellular matrix protein 2
chr19	5525484;5528071	5527955;5528229	+	5525484;5527712	5526094;5528229	MXE	0.5	100	100	ENSMUST00000236518.2	ENSMUSG00000024909.16	Efemp2	chr19	protein_coding	epidermal growth factor-containing fibulin-like extracellular matrix protein 2
chr19	5533586	5533958	-	5533586;5533693	5533663;5533958	ES	0.33	50	50	ENSMUST00000133436.8	ENSMUSG00000024906.11	Mus81	chr19	protein_coding	MUS81 structure-specific endonuclease subunit
chr19	5533249	5533483	-	5533219	5533483	A3SS	0.5	50	50	ENSMUST00000133436.8	ENSMUSG00000024906.11	Mus81	chr19	protein_coding	MUS81 structure-specific endonuclease subunit
chr19	5533791	5533958	-	5533693	5533958	A3SS	0.33	50	50	ENSMUST00000133436.8	ENSMUSG00000024906.11	Mus81	chr19	protein_coding	MUS81 structure-specific endonuclease subunit
chr19	5537944	5538016	-	5537919	5538016	A3SS	0.5	50	50	ENSMUST00000133436.8	ENSMUSG00000024906.11	Mus81	chr19	protein_coding	MUS81 structure-specific endonuclease subunit
chr19	5533586	5533958	-	5533586;5533791	5533663;5533958	ES	0.33	50	50	ENSMUST00000124334.8	ENSMUSG00000024906.11	Mus81	chr19	protein_coding	MUS81 structure-specific endonuclease subunit
chr19	5535381	5535654	-	5535381	5535516	A5SS	0.5	50	50	ENSMUST00000147961.8	ENSMUSG00000024906.11	Mus81	chr19	protein_coding	MUS81 structure-specific endonuclease subunit
chr19	5533586	5533958	-	5533693	5533958	A3SS	0.33	50	50	ENSMUST00000149908.2	ENSMUSG00000024906.11	Mus81	chr19	protein_coding	MUS81 structure-specific endonuclease subunit
chr19	5533586	5533958	-	5533586	5533663	A5SS	0.5	50	50	ENSMUST00000146661.2	ENSMUSG00000024906.11	Mus81	chr19	protein_coding	MUS81 structure-specific endonuclease subunit
chr19	5547580	5547933	-	5547580;5547807	5547703;5547933	ES	0.5	50	50	ENSMUST00000237945.2	ENSMUSG00000056185.6	Snx32	chr19	protein_coding	sorting nexin 32
chr19	5548852;5550998	5550950;5560361	-	5548852	5560361	cassetteExon	0.5	100	100	ENSMUST00000237945.2	ENSMUSG00000056185.6	Snx32	chr19	protein_coding	sorting nexin 32
chr19	5545676	5545925	-	5542638	5545925	A3SS	0.5	50	50	ENSMUST00000237945.2	ENSMUSG00000056185.6	Snx32	chr19	protein_coding	sorting nexin 32
chr19	5548329	5548424	-	5548329	5548440	A5SS	0.5	50	50	ENSMUST00000237945.2	ENSMUSG00000056185.6	Snx32	chr19	protein_coding	sorting nexin 32
chr19	5581686	5592379	+	5581686	5599707	A3SS	0.5	50	50	ENSMUST00000210638.2	ENSMUSG00000109695.2	Gm31166	chr19	transcribed_processed_pseudogene	predicted gene, 31166
chr19	5603799	5608916	-	5603799	5610229	A5SS	0.5	50	50	ENSMUST00000025861.3	ENSMUSG00000024922.3	Ovol1	chr19	protein_coding	ovo like zinc finger 1
chr19	5652597	5656788	+	5652597	5652852	3pMXE	0.33	50	50	ENSMUST00000025864.11	ENSMUSG00000024925.12	Rnaseh2c	chr19	protein_coding	ribonuclease H2, subunit C
chr19	5652597	5652834	+	5652597	5652852	A3SS	0.33	50	50	ENSMUST00000025864.11	ENSMUSG00000024925.12	Rnaseh2c	chr19	protein_coding	ribonuclease H2, subunit C
chr19	5652597	5652834	+	5652597	5656788	A3SS	0.33	50	50	ENSMUST00000236461.2	ENSMUSG00000024925.12	Rnaseh2c	chr19	protein_coding	ribonuclease H2, subunit C
chr19	5658740	5659264	-	5658740;5658985	5658830;5659264	ES	0.33	50	50	ENSMUST00000236883.2	ENSMUSG00000024926.11	Kat5	chr19	protein_coding	K(lysine) acetyltransferase 5
chr19	5657983	5658283	-	5657992	5658283	A3SS	0.5	50	50	ENSMUST00000236883.2	ENSMUSG00000024926.11	Kat5	chr19	protein_coding	K(lysine) acetyltransferase 5
chr19	5659012	5659264	-	5658985	5659264	A3SS	0.33	50	50	ENSMUST00000236883.2	ENSMUSG00000024926.11	Kat5	chr19	protein_coding	K(lysine) acetyltransferase 5
chr19	5654017	5655400	-	5654017	5654122	A5SS&ES	0.5	50	50	ENSMUST00000236883.2	ENSMUSG00000024926.11	Kat5	chr19	protein_coding	K(lysine) acetyltransferase 5
chr19	5659559	5659740	-	5659559	5659880	A5SS	0.5	50	50	ENSMUST00000236883.2	ENSMUSG00000024926.11	Kat5	chr19	protein_coding	K(lysine) acetyltransferase 5
chr19	5658740;5659012	5658830;5659264	-	5658740	5659264	cassetteExon	0.5	100	100	ENSMUST00000236964.2	ENSMUSG00000024926.11	Kat5	chr19	protein_coding	K(lysine) acetyltransferase 5
chr19	5658740	5659264	-	5659012	5659264	3pMXE	0.33	50	50	ENSMUST00000236264.2	ENSMUSG00000024926.11	Kat5	chr19	protein_coding	K(lysine) acetyltransferase 5
chr19	5689031	5690331	+	5689031;5689978	5689887;5690331	ES	0.5	50	50	ENSMUST00000025867.6	ENSMUSG00000024927.9	Rela	chr19	protein_coding	v-rel reticuloendotheliosis viral oncogene homolog A (avian)
chr19	5695615;5696726	5696622;5696828	+	5695615	5696828	cassetteExon	0.5	100	100	ENSMUST00000025867.6	ENSMUSG00000024927.9	Rela	chr19	protein_coding	v-rel reticuloendotheliosis viral oncogene homolog A (avian)
chr19	5688004	5688579	+	5688486	5688579	A5SS&ES	0.33	50	50	ENSMUST00000025867.6	ENSMUSG00000024927.9	Rela	chr19	protein_coding	v-rel reticuloendotheliosis viral oncogene homolog A (avian)
chr19	5688176	5688460	+	5687869	5688460	A5SS	0.5	50	50	ENSMUST00000025867.6	ENSMUSG00000024927.9	Rela	chr19	protein_coding	v-rel reticuloendotheliosis viral oncogene homolog A (avian)
chr19	5688176	5688579	+	5688486	5688579	A5SS&ES	0.33	50	50	ENSMUST00000025867.6	ENSMUSG00000024927.9	Rela	chr19	protein_coding	v-rel reticuloendotheliosis viral oncogene homolog A (avian)
chr19	5688176	5688579	+	5688004	5688579	A5SS	0.33	50	50	ENSMUST00000236300.2	ENSMUSG00000024927.9	Rela	chr19	protein_coding	v-rel reticuloendotheliosis viral oncogene homolog A (avian)
chr19	5688176;5688486	5688460;5688579	+	5688176	5688579	cassetteExon	0.5	100	100	ENSMUST00000238126.2	ENSMUSG00000024927.9	Rela	chr19	protein_coding	v-rel reticuloendotheliosis viral oncogene homolog A (avian)
chr19	5711139;5711651	5711624;5713632	-	5711139	5713632	cassetteExon	0.5	100	100	ENSMUST00000169854.2	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5711139;5711654	5711624;5713632	-	5711139	5713632	cassetteExon	0.5	100	100	ENSMUST00000169854.2	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5711139;5711686	5711624;5713632	-	5711139	5713632	cassetteExon	0.5	100	100	ENSMUST00000169854.2	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5711139;5712869	5712616;5713632	-	5711139	5713632	cassetteExon	0.5	100	100	ENSMUST00000169854.2	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5702767	5704027	-	5702901	5704027	A3SS	0.5	50	50	ENSMUST00000169854.2	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5710426	5713632	-	5711139	5713632	A3SS	0.14	50	50	ENSMUST00000169854.2	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5711109	5713632	-	5711139	5713632	A3SS	0.14	50	50	ENSMUST00000169854.2	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5711139;5712869	5712616;5713632	-	5711139;5711654	5711624;5713632	MXE	0.5	100	100	ENSMUST00000164304.9	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5711654;5712869	5712616;5713632	-	5711654	5713632	cassetteExon	0.5	100	100	ENSMUST00000164304.9	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5710426	5713632	-	5711654	5713632	A3SS&ES	0.14	50	50	ENSMUST00000164304.9	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5711109	5713632	-	5711654	5713632	A3SS&ES	0.14	50	50	ENSMUST00000164304.9	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5711651	5713632	-	5711654	5713632	A3SS	0.14	50	50	ENSMUST00000164304.9	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5711686	5713632	-	5711654	5713632	A3SS	0.14	50	50	ENSMUST00000164304.9	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5711139	5712616	-	5711139	5711624	5pMXE	0.33	50	50	ENSMUST00000236006.2	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5711139	5713632	-	5711139	5711624	5pMXE	0.33	50	50	ENSMUST00000236006.2	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5711139;5711651	5711624;5713632	-	5711139;5712869	5712616;5713632	MXE	0.5	100	100	ENSMUST00000080824.13	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5711139;5711654	5711624;5712616	-	5711139	5712616	cassetteExon	0.5	100	100	ENSMUST00000080824.13	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5711139;5711686	5711624;5712616	-	5711139	5712616	cassetteExon	0.5	100	100	ENSMUST00000080824.13	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5711139;5711686	5711624;5713632	-	5711139;5712869	5712616;5713632	MXE	0.5	100	100	ENSMUST00000080824.13	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5710426	5713632	-	5712869	5713632	A3SS&ES	0.14	50	50	ENSMUST00000080824.13	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5711109	5713632	-	5712869	5713632	A3SS&ES	0.14	50	50	ENSMUST00000080824.13	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5711651	5713632	-	5712869	5713632	A3SS&ES	0.14	50	50	ENSMUST00000071857.13	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5711686	5712616	-	5711654	5712616	A3SS	0.33	50	50	ENSMUST00000071857.13	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5711686	5713632	-	5712869	5713632	A3SS&ES	0.14	50	50	ENSMUST00000071857.13	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5711109	5713632	-	5710426	5713632	A3SS	0.14	50	50	ENSMUST00000236464.2	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5711651	5713632	-	5710426	5713632	A3SS	0.14	50	50	ENSMUST00000236464.2	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5711686	5713632	-	5710426	5713632	A3SS	0.14	50	50	ENSMUST00000236464.2	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5711651	5713632	-	5711109	5713632	A3SS	0.14	50	50	ENSMUST00000237874.2	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5711686	5713632	-	5711109	5713632	A3SS	0.14	50	50	ENSMUST00000237874.2	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5711686;5712869	5712616;5713632	-	5711686	5713632	cassetteExon	0.5	100	100	ENSMUST00000237544.2	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5711651	5713632	-	5711686	5713632	A3SS	0.16	50	50	ENSMUST00000237544.2	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5711654	5713632	-	5712869	5713632	A3SS&ES	0.16	50	50	ENSMUST00000238020.2	ENSMUSG00000056917.14	Sipa1	chr19	protein_coding	signal-induced proliferation associated gene 1
chr19	5715869	5716537	-	5715869;5716452	5716178;5716537	ES	0.5	50	50	ENSMUST00000113615.9	ENSMUSG00000054874.13	Pcnx3	chr19	protein_coding	pecanex homolog 3
chr19	5727195	5727434	-	5727303	5727434	A3SS	0.5	50	50	ENSMUST00000113615.9	ENSMUSG00000054874.13	Pcnx3	chr19	protein_coding	pecanex homolog 3
chr19	5731620	5733305	-	5731581	5733305	A3SS	0.5	50	50	ENSMUST00000113615.9	ENSMUSG00000054874.13	Pcnx3	chr19	protein_coding	pecanex homolog 3
chr19	5731581	5733335	-	5731581	5733305	A5SS	0.5	50	50	ENSMUST00000113615.9	ENSMUSG00000054874.13	Pcnx3	chr19	protein_coding	pecanex homolog 3
chr19	5736554	5736655	-	5734700	5736655	A3SS	0.5	50	50	ENSMUST00000068169.12	ENSMUSG00000054874.13	Pcnx3	chr19	protein_coding	pecanex homolog 3
chr19	5734700	5735120	-	5734700	5736655	A5SS	0.5	50	50	ENSMUST00000068169.12	ENSMUSG00000054874.13	Pcnx3	chr19	protein_coding	pecanex homolog 3
chr19	5715869	5716537	-	5715869	5716178	5pMXE	0.5	50	50	ENSMUST00000124905.2	ENSMUSG00000054874.13	Pcnx3	chr19	protein_coding	pecanex homolog 3
chr19	5715869	5716537	-	5716452	5716537	3pMXE	0.5	50	50	ENSMUST00000132420.2	ENSMUSG00000054874.13	Pcnx3	chr19	protein_coding	pecanex homolog 3
chr19	5731602	5733335	-	5731581	5733335	A3SS	0.5	50	50	ENSMUST00000145270.8	ENSMUSG00000054874.13	Pcnx3	chr19	protein_coding	pecanex homolog 3
chr19	5739294	5739505	+	5738858	5739505	A5SS	0.5	50	50	ENSMUST00000235727.2	ENSMUSG00000004054.10	Map3k11	chr19	protein_coding	mitogen-activated protein kinase kinase kinase 11
chr19	5747677;5749970	5749902;5750618	+	5747677	5750618	cassetteExon	0.5	100	100	ENSMUST00000004156.10	ENSMUSG00000004054.10	Map3k11	chr19	protein_coding	mitogen-activated protein kinase kinase kinase 11
chr19	5743049	5745189	+	5741016	5745189	A5SS	0.5	50	50	ENSMUST00000004156.10	ENSMUSG00000004054.10	Map3k11	chr19	protein_coding	mitogen-activated protein kinase kinase kinase 11
chr19	5755219	5756095	+	5754822	5756095	A5SS	0.33	50	50	ENSMUST00000052448.4	ENSMUSG00000024936.9	Kcnk7	chr19	protein_coding	potassium channel, subfamily K, member 7
chr19	5755705	5756095	+	5754822	5756095	A5SS	0.33	50	50	ENSMUST00000052448.4	ENSMUSG00000024936.9	Kcnk7	chr19	protein_coding	potassium channel, subfamily K, member 7
chr19	5755219;5755705	5755595;5756095	+	5755219	5756095	cassetteExon	0.5	100	100	ENSMUST00000236818.2	ENSMUSG00000024936.9	Kcnk7	chr19	protein_coding	potassium channel, subfamily K, member 7
chr19	5770905;5771035	5771000;5771470	-	5770905	5771470	cassetteExon	0.5	100	100	ENSMUST00000049295.15	ENSMUSG00000024937.16	Ehbp1l1	chr19	protein_coding	EH domain binding protein 1-like 1
chr19	5760397	5760602	-	5760338	5760602	A3SS	0.5	50	50	ENSMUST00000049295.15	ENSMUSG00000024937.16	Ehbp1l1	chr19	protein_coding	EH domain binding protein 1-like 1
chr19	5767224	5769976	-	5767224	5767690	A5SS	0.25	50	50	ENSMUST00000049295.15	ENSMUSG00000024937.16	Ehbp1l1	chr19	protein_coding	EH domain binding protein 1-like 1
chr19	5767224	5770213	-	5767224	5767690	A5SS	0.25	50	50	ENSMUST00000049295.15	ENSMUSG00000024937.16	Ehbp1l1	chr19	protein_coding	EH domain binding protein 1-like 1
chr19	5767224	5770714	-	5767224	5767690	A5SS&ES	0.25	50	50	ENSMUST00000049295.15	ENSMUSG00000024937.16	Ehbp1l1	chr19	protein_coding	EH domain binding protein 1-like 1
chr19	5767224	5769976	-	5767224	5770714	A5SS	0.25	50	50	ENSMUST00000075606.6	ENSMUSG00000024937.16	Ehbp1l1	chr19	protein_coding	EH domain binding protein 1-like 1
chr19	5767224	5770213	-	5767224	5770714	A5SS	0.25	50	50	ENSMUST00000075606.6	ENSMUSG00000024937.16	Ehbp1l1	chr19	protein_coding	EH domain binding protein 1-like 1
chr19	5767224	5769976	-	5767224	5770213	A5SS	0.25	50	50	ENSMUST00000236215.2	ENSMUSG00000024937.16	Ehbp1l1	chr19	protein_coding	EH domain binding protein 1-like 1
chr19	5778857	5779265	-	5778906	5779265	A3SS	0.33	50	50	ENSMUST00000116558.3	ENSMUSG00000024939.7	Fam89b	chr19	protein_coding	family with sequence similarity 89, member B
chr19	5778896	5779265	-	5778906	5779265	A3SS	0.33	50	50	ENSMUST00000116558.3	ENSMUSG00000024939.7	Fam89b	chr19	protein_coding	family with sequence similarity 89, member B
chr19	5778857	5779265	-	5778896	5779265	A3SS	0.33	50	50	ENSMUST00000099955.4	ENSMUSG00000024939.7	Fam89b	chr19	protein_coding	family with sequence similarity 89, member B
chr19	5780740	5781162	-	5780740	5781269	A5SS	0.5	50	50	ENSMUST00000160852.8	ENSMUSG00000118125.2	Gm50387	chr19	protein_coding	predicted gene, 50387
chr19	5781353	5781467	-	5781353	5781472	A5SS	0.5	50	50	ENSMUST00000160852.8	ENSMUSG00000118125.2	Gm50387	chr19	protein_coding	predicted gene, 50387
chr19	5795797	5795997	+	5795797	5795946	A3SS	0.33	50	50	ENSMUST00000237317.2	ENSMUSG00000024940.12	Ltbp3	chr19	protein_coding	latent transforming growth factor beta binding protein 3
chr19	5795797	5796008	+	5795797	5795946	A3SS	0.33	50	50	ENSMUST00000237317.2	ENSMUSG00000024940.12	Ltbp3	chr19	protein_coding	latent transforming growth factor beta binding protein 3
chr19	5806959;5807203	5807063;5807339	+	5806959	5807339	cassetteExon	0.5	100	100	ENSMUST00000081496.6	ENSMUSG00000024940.12	Ltbp3	chr19	protein_coding	latent transforming growth factor beta binding protein 3
chr19	5807500	5807583	+	5807500	5807575	A3SS	0.5	50	50	ENSMUST00000081496.6	ENSMUSG00000024940.12	Ltbp3	chr19	protein_coding	latent transforming growth factor beta binding protein 3
chr19	5795797	5795997	+	5795797	5796008	A3SS	0.33	50	50	ENSMUST00000236258.2	ENSMUSG00000024940.12	Ltbp3	chr19	protein_coding	latent transforming growth factor beta binding protein 3
chr19	5809367	5809693	-	5809370	5809693	A3SS	0.5	50	50	ENSMUST00000236978.2	ENSMUSG00000024941.10	Scyl1	chr19	protein_coding	SCY1-like 1 (S. cerevisiae)
chr19	5809781	5810009	-	5809832	5810009	A3SS	0.5	50	50	ENSMUST00000236978.2	ENSMUSG00000024941.10	Scyl1	chr19	protein_coding	SCY1-like 1 (S. cerevisiae)
chr19	5810075	5810741	-	5810636	5810741	A3SS&ES	0.5	50	50	ENSMUST00000236978.2	ENSMUSG00000024941.10	Scyl1	chr19	protein_coding	SCY1-like 1 (S. cerevisiae)
chr19	5819839	5820033	-	5819839	5820231	A5SS	0.33	50	50	ENSMUST00000236978.2	ENSMUSG00000024941.10	Scyl1	chr19	protein_coding	SCY1-like 1 (S. cerevisiae)
chr19	5819839	5820345	-	5819839	5820231	A5SS	0.33	50	50	ENSMUST00000236978.2	ENSMUSG00000024941.10	Scyl1	chr19	protein_coding	SCY1-like 1 (S. cerevisiae)
chr19	5820580	5820671	-	5820580	5820751	A5SS	0.5	50	50	ENSMUST00000236978.2	ENSMUSG00000024941.10	Scyl1	chr19	protein_coding	SCY1-like 1 (S. cerevisiae)
chr19	5819839	5820033	-	5819839	5820345	A5SS	0.33	50	50	ENSMUST00000236297.2	ENSMUSG00000024941.10	Scyl1	chr19	protein_coding	SCY1-like 1 (S. cerevisiae)
chr19	5845813	5846417	-	5845813	5847032	A5SS	0.5	50	50	ENSMUST00000173314.2	ENSMUSG00000092341.4	Malat1	chr19	lncRNA	metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
chr19	5898631	5901029	+	5895778	5901029	A5SS	0.5	50	50	ENSMUST00000187697.2	ENSMUSG00000043488.6	Frmd8os	chr19	lncRNA	FERM domain containing 8, opposite strand
chr19	5924836	5925119	-	5924822	5925119	A3SS	0.5	50	50	ENSMUST00000025728.13	ENSMUSG00000024816.13	Frmd8	chr19	protein_coding	FERM domain containing 8
chr19	5928123	5930113	+	5928123;5929920	5929877;5930113	ES	0.5	50	50	ENSMUST00000145200.8	ENSMUSG00000024818.16	Slc25a45	chr19	protein_coding	solute carrier family 25, member 45
chr19	5928123;5928719	5928635;5929877	+	5928123	5929877	cassetteExon	0.5	100	100	ENSMUST00000145200.8	ENSMUSG00000024818.16	Slc25a45	chr19	protein_coding	solute carrier family 25, member 45
chr19	5930188	5930468	+	5930184	5930468	A5SS	0.33	50	50	ENSMUST00000145200.8	ENSMUSG00000024818.16	Slc25a45	chr19	protein_coding	solute carrier family 25, member 45
chr19	5930226	5930468	+	5930184	5930468	A5SS	0.33	50	50	ENSMUST00000145200.8	ENSMUSG00000024818.16	Slc25a45	chr19	protein_coding	solute carrier family 25, member 45
chr19	5928123	5929877	+	5928719	5929877	A5SS	0.5	50	50	ENSMUST00000025732.14	ENSMUSG00000024818.16	Slc25a45	chr19	protein_coding	solute carrier family 25, member 45
chr19	5928123	5930113	+	5929920	5930113	A5SS&ES	0.5	50	50	ENSMUST00000025732.14	ENSMUSG00000024818.16	Slc25a45	chr19	protein_coding	solute carrier family 25, member 45
chr19	5928123	5928635	+	5928123	5930113	A3SS	0.33	50	50	ENSMUST00000235340.2	ENSMUSG00000024818.16	Slc25a45	chr19	protein_coding	solute carrier family 25, member 45
chr19	5930188	5930468	+	5930226	5930468	A5SS	0.33	50	50	ENSMUST00000136833.8	ENSMUSG00000024818.16	Slc25a45	chr19	protein_coding	solute carrier family 25, member 45
chr19	5943145	5943998	-	5943142	5943998	A3SS	0.5	50	50	ENSMUST00000055911.6	ENSMUSG00000044390.6	Tigd3	chr19	protein_coding	tigger transposable element derived 3
chr19	5957189	5963010	-	5957189	5962769	5pMXE	0.5	50	50	ENSMUST00000136983.8	ENSMUSG00000024826.16	Dpf2	chr19	protein_coding	D4, zinc and double PHD fingers family 2
chr19	5952796;5953800	5953759;5954268	-	5952796	5954268	cassetteExon	0.5	100	100	ENSMUST00000136983.8	ENSMUSG00000024826.16	Dpf2	chr19	protein_coding	D4, zinc and double PHD fingers family 2
chr19	5952462	5952659	-	5952519	5952659	A3SS	0.5	50	50	ENSMUST00000136983.8	ENSMUSG00000024826.16	Dpf2	chr19	protein_coding	D4, zinc and double PHD fingers family 2
chr19	5954340	5954482	-	5954346	5954482	A3SS	0.5	50	50	ENSMUST00000136983.8	ENSMUSG00000024826.16	Dpf2	chr19	protein_coding	D4, zinc and double PHD fingers family 2
chr19	5962156	5962769	-	5957189	5962769	A3SS	0.5	50	50	ENSMUST00000136983.8	ENSMUSG00000024826.16	Dpf2	chr19	protein_coding	D4, zinc and double PHD fingers family 2
chr19	5963100	5964565	+	5963100	5964226	A3SS	0.5	50	50	ENSMUST00000209642.2	ENSMUSG00000110156.3	Gm42067	chr19	lncRNA	predicted gene, 42067
chr19	6011243;6013426	6013322;6013854	-	6011243	6013854	cassetteExon	0.5	100	100	ENSMUST00000025752.15	ENSMUSG00000024833.16	Pola2	chr19	protein_coding	polymerase (DNA directed), alpha 2
chr19	5991580	5992024	-	5991045	5992024	A3SS	0.5	50	50	ENSMUST00000025752.15	ENSMUSG00000024833.16	Pola2	chr19	protein_coding	polymerase (DNA directed), alpha 2
chr19	6011214	6013854	-	6011243	6013854	A3SS	0.33	50	50	ENSMUST00000025752.15	ENSMUSG00000024833.16	Pola2	chr19	protein_coding	polymerase (DNA directed), alpha 2
chr19	6001814	6001934	-	6001814	6003093	A5SS	0.5	50	50	ENSMUST00000025752.15	ENSMUSG00000024833.16	Pola2	chr19	protein_coding	polymerase (DNA directed), alpha 2
chr19	6013426	6013854	-	6011214	6013854	A3SS	0.33	50	50	ENSMUST00000237136.2	ENSMUSG00000024833.16	Pola2	chr19	protein_coding	polymerase (DNA directed), alpha 2
chr19	6031781	6034826	-	6031781;6033029	6032861;6034826	ES	0.5	50	50	ENSMUST00000041827.8	ENSMUSG00000037451.9	Slc22a20	chr19	protein_coding	solute carrier family 22 (organic anion transporter), member 20
chr19	6064498	6065328	-	6064498	6065136	5pMXE	0.33	50	50	ENSMUST00000025891.11	ENSMUSG00000024942.20	Capn1	chr19	protein_coding	calpain 1
chr19	6064498	6065766	-	6064498	6065136	5pMXE	0.33	50	50	ENSMUST00000025891.11	ENSMUSG00000024942.20	Capn1	chr19	protein_coding	calpain 1
chr19	6064297	6065136	-	6064498	6065136	A3SS	0.5	50	50	ENSMUST00000025891.11	ENSMUSG00000024942.20	Capn1	chr19	protein_coding	calpain 1
chr19	6064532	6065766	-	6064498	6065766	A3SS	0.5	50	50	ENSMUST00000164843.10	ENSMUSG00000024942.20	Capn1	chr19	protein_coding	calpain 1
chr19	6064498	6065328	-	6064498	6065766	A5SS	0.33	50	50	ENSMUST00000164843.10	ENSMUSG00000024942.20	Capn1	chr19	protein_coding	calpain 1
chr19	6102509	6102590	+	6102509	6102578	A3SS	0.5	50	50	ENSMUST00000138532.8	ENSMUSG00000024807.19	Syvn1	chr19	protein_coding	synovial apoptosis inhibitor 1, synoviolin
chr19	6097011	6097947	+	6097158	6097947	A5SS	0.33	50	50	ENSMUST00000138532.8	ENSMUSG00000024807.19	Syvn1	chr19	protein_coding	synovial apoptosis inhibitor 1, synoviolin
chr19	6097360	6097947	+	6097158	6097947	A5SS	0.33	50	50	ENSMUST00000138532.8	ENSMUSG00000024807.19	Syvn1	chr19	protein_coding	synovial apoptosis inhibitor 1, synoviolin
chr19	6097360	6097947	+	6097011	6097947	A5SS	0.33	50	50	ENSMUST00000129081.8	ENSMUSG00000024807.19	Syvn1	chr19	protein_coding	synovial apoptosis inhibitor 1, synoviolin
chr19	6098637	6099801	+	6098637	6098725	A3SS&ES	0.5	50	50	ENSMUST00000235478.2	ENSMUSG00000024807.19	Syvn1	chr19	protein_coding	synovial apoptosis inhibitor 1, synoviolin
chr19	6099283	6099801	+	6098637	6099801	A5SS	0.5	50	50	ENSMUST00000025723.9	ENSMUSG00000024807.19	Syvn1	chr19	protein_coding	synovial apoptosis inhibitor 1, synoviolin
chr19	6105230	6107689	-	6105230;6107109	6106959;6107689	ES	0.33	50	50	ENSMUST00000007482.8	ENSMUSG00000007338.11	Mrpl49	chr19	protein_coding	mitochondrial ribosomal protein L49
chr19	6107128	6107689	-	6107109	6107689	A3SS	0.33	50	50	ENSMUST00000007482.8	ENSMUSG00000007338.11	Mrpl49	chr19	protein_coding	mitochondrial ribosomal protein L49
chr19	6105230;6107128	6106959;6107689	-	6105230	6107689	cassetteExon	0.5	100	100	ENSMUST00000235520.2	ENSMUSG00000007338.11	Mrpl49	chr19	protein_coding	mitochondrial ribosomal protein L49
chr19	6105230	6107689	-	6105230	6106959	5pMXE	0.5	50	50	ENSMUST00000236412.2	ENSMUSG00000007338.11	Mrpl49	chr19	protein_coding	mitochondrial ribosomal protein L49
chr19	6105230	6107689	-	6107128	6107689	3pMXE	0.33	50	50	ENSMUST00000236833.2	ENSMUSG00000007338.11	Mrpl49	chr19	protein_coding	mitochondrial ribosomal protein L49
chr19	6108031	6108258	+	6108031	6108273	A3SS	0.25	50	50	ENSMUST00000178310.9	ENSMUSG00000038274.14	Fau	chr19	protein_coding	Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)
chr19	6108031	6108276	+	6108031	6108273	A3SS	0.25	50	50	ENSMUST00000178310.9	ENSMUSG00000038274.14	Fau	chr19	protein_coding	Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)
chr19	6108031	6108305	+	6108031	6108273	A3SS	0.25	50	50	ENSMUST00000178310.9	ENSMUSG00000038274.14	Fau	chr19	protein_coding	Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)
chr19	6108355	6108563	+	6108355	6108458	A3SS	0.5	50	50	ENSMUST00000178310.9	ENSMUSG00000038274.14	Fau	chr19	protein_coding	Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)
chr19	6108031	6108258	+	6108031	6108305	A3SS	0.25	50	50	ENSMUST00000237859.2	ENSMUSG00000038274.14	Fau	chr19	protein_coding	Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)
chr19	6108031	6108276	+	6108031	6108305	A3SS	0.25	50	50	ENSMUST00000237859.2	ENSMUSG00000038274.14	Fau	chr19	protein_coding	Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)
chr19	6108031	6108258	+	6108031	6108276	A3SS	0.25	50	50	ENSMUST00000043074.14	ENSMUSG00000038274.14	Fau	chr19	protein_coding	Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)
chr19	6116723	6117153	-	6116723;6117052	6116998;6117153	ES	0.33	50	50	ENSMUST00000159084.8	ENSMUSG00000024799.17	Tm7sf2	chr19	protein_coding	transmembrane 7 superfamily member 2
chr19	6117052	6117699	-	6117052;6117349	6117153;6117699	ES	0.5	50	50	ENSMUST00000159084.8	ENSMUSG00000024799.17	Tm7sf2	chr19	protein_coding	transmembrane 7 superfamily member 2
chr19	6113476;6113637	6113557;6113852	-	6113476	6113852	cassetteExon	0.5	100	100	ENSMUST00000159084.8	ENSMUSG00000024799.17	Tm7sf2	chr19	protein_coding	transmembrane 7 superfamily member 2
chr19	6113131	6113354	-	6113103	6113354	A3SS	0.5	50	50	ENSMUST00000159084.8	ENSMUSG00000024799.17	Tm7sf2	chr19	protein_coding	transmembrane 7 superfamily member 2
chr19	6116574	6117153	-	6117052	6117153	A3SS&ES	0.33	50	50	ENSMUST00000159084.8	ENSMUSG00000024799.17	Tm7sf2	chr19	protein_coding	transmembrane 7 superfamily member 2
chr19	6116593	6116998	-	6116723	6116998	A3SS	0.33	50	50	ENSMUST00000159084.8	ENSMUSG00000024799.17	Tm7sf2	chr19	protein_coding	transmembrane 7 superfamily member 2
chr19	6117349	6117808	-	6117349	6117699	A5SS	0.5	50	50	ENSMUST00000159084.8	ENSMUSG00000024799.17	Tm7sf2	chr19	protein_coding	transmembrane 7 superfamily member 2
chr19	6114228;6117052	6116998;6117153	-	6114228;6116723	6116341;6117153	MXE	0.5	100	100	ENSMUST00000161090.8	ENSMUSG00000024799.17	Tm7sf2	chr19	protein_coding	transmembrane 7 superfamily member 2
chr19	6114228;6117052	6116998;6117699	-	6114228;6117349	6116341;6117699	MXE	0.5	100	100	ENSMUST00000161090.8	ENSMUSG00000024799.17	Tm7sf2	chr19	protein_coding	transmembrane 7 superfamily member 2
chr19	6116723;6117052	6116998;6117699	-	6116723;6117349	6117153;6117699	MXE	0.5	100	100	ENSMUST00000161090.8	ENSMUSG00000024799.17	Tm7sf2	chr19	protein_coding	transmembrane 7 superfamily member 2
chr19	6116574	6117153	-	6116723	6117153	A3SS	0.33	50	50	ENSMUST00000161090.8	ENSMUSG00000024799.17	Tm7sf2	chr19	protein_coding	transmembrane 7 superfamily member 2
chr19	6114228;6116593	6116341;6116998	-	6114228	6116998	cassetteExon	0.5	100	100	ENSMUST00000161718.8	ENSMUSG00000024799.17	Tm7sf2	chr19	protein_coding	transmembrane 7 superfamily member 2
chr19	6114228;6116723	6116341;6116998	-	6114228	6116998	cassetteExon	0.5	100	100	ENSMUST00000161718.8	ENSMUSG00000024799.17	Tm7sf2	chr19	protein_coding	transmembrane 7 superfamily member 2
chr19	6114228;6117052	6116998;6117153	-	6114228;6116574	6116341;6117153	MXE	0.5	100	100	ENSMUST00000162575.8	ENSMUSG00000024799.17	Tm7sf2	chr19	protein_coding	transmembrane 7 superfamily member 2
chr19	6116723	6117153	-	6117052	6117153	A3SS	0.33	50	50	ENSMUST00000162549.2	ENSMUSG00000024799.17	Tm7sf2	chr19	protein_coding	transmembrane 7 superfamily member 2
chr19	6117052	6117699	-	6117052	6117153	A5SS&ES	0.5	50	50	ENSMUST00000162549.2	ENSMUSG00000024799.17	Tm7sf2	chr19	protein_coding	transmembrane 7 superfamily member 2
chr19	6116723	6117153	-	6116723	6116998	5pMXE	0.5	50	50	ENSMUST00000162721.2	ENSMUSG00000024799.17	Tm7sf2	chr19	protein_coding	transmembrane 7 superfamily member 2
chr19	6114228	6116998	-	6116723	6116998	3pMXE	0.33	50	50	ENSMUST00000159836.2	ENSMUSG00000024799.17	Tm7sf2	chr19	protein_coding	transmembrane 7 superfamily member 2
chr19	6121738	6126981	-	6121738;6126522	6126393;6126981	ES	0.5	50	50	ENSMUST00000025711.13	ENSMUSG00000024797.15	Vps51	chr19	protein_coding	VPS51 GARP complex subunit
chr19	6121738;6123596	6123533;6126393	-	6121738	6126393	cassetteExon	0.5	100	100	ENSMUST00000025711.13	ENSMUSG00000024797.15	Vps51	chr19	protein_coding	VPS51 GARP complex subunit
chr19	6118471	6118885	-	6118405	6118885	A3SS	0.5	50	50	ENSMUST00000025711.13	ENSMUSG00000024797.15	Vps51	chr19	protein_coding	VPS51 GARP complex subunit
chr19	6121738	6123533	-	6121738	6126981	A5SS	0.33	50	50	ENSMUST00000160233.2	ENSMUSG00000024797.15	Vps51	chr19	protein_coding	VPS51 GARP complex subunit
chr19	6121738	6126981	-	6126522	6126981	3pMXE	0.5	50	50	ENSMUST00000160590.2	ENSMUSG00000024797.15	Vps51	chr19	protein_coding	VPS51 GARP complex subunit
chr19	6131244	6131877	-	6127508	6131877	A3SS	0.5	50	50	ENSMUST00000162374.4	ENSMUSG00000100621.3	Gm28374	chr19	protein_coding	predicted gene 28374
chr19	6130346;6130551	6130452;6130658	+	6130346	6130658	cassetteExon	0.5	100	100	ENSMUST00000149347.8	ENSMUSG00000047733.11	Tmem262	chr19	protein_coding	transmembrane protein 262
chr19	6132808	6134382	-	6132808;6134090	6133979;6134382	ES	0.33	50	50	ENSMUST00000025707.9	ENSMUSG00000024792.10	Zfpl1	chr19	protein_coding	zinc finger like protein 1
chr19	6134078	6134382	-	6134090	6134382	A3SS	0.33	50	50	ENSMUST00000025707.9	ENSMUSG00000024792.10	Zfpl1	chr19	protein_coding	zinc finger like protein 1
chr19	6131244	6131903	-	6131244	6131877	A5SS	0.5	50	50	ENSMUST00000025707.9	ENSMUSG00000024792.10	Zfpl1	chr19	protein_coding	zinc finger like protein 1
chr19	6134491	6134676	-	6134491	6134894	A5SS	0.25	50	50	ENSMUST00000025707.9	ENSMUSG00000024792.10	Zfpl1	chr19	protein_coding	zinc finger like protein 1
chr19	6134491	6134803	-	6134491	6134894	A5SS	0.25	50	50	ENSMUST00000025707.9	ENSMUSG00000024792.10	Zfpl1	chr19	protein_coding	zinc finger like protein 1
chr19	6134491	6134825	-	6134491	6134894	A5SS	0.25	50	50	ENSMUST00000025707.9	ENSMUSG00000024792.10	Zfpl1	chr19	protein_coding	zinc finger like protein 1
chr19	6132808	6134382	-	6132808;6134078	6133979;6134382	ES	0.33	50	50	ENSMUST00000237738.2	ENSMUSG00000024792.10	Zfpl1	chr19	protein_coding	zinc finger like protein 1
chr19	6134491	6134676	-	6134491	6134825	A5SS	0.25	50	50	ENSMUST00000237738.2	ENSMUSG00000024792.10	Zfpl1	chr19	protein_coding	zinc finger like protein 1
chr19	6134491	6134803	-	6134491	6134825	A5SS	0.25	50	50	ENSMUST00000237738.2	ENSMUSG00000024792.10	Zfpl1	chr19	protein_coding	zinc finger like protein 1
chr19	6134491	6134803	-	6134491	6134676	5pMXE	0.25	50	50	ENSMUST00000161548.8	ENSMUSG00000024792.10	Zfpl1	chr19	protein_coding	zinc finger like protein 1
chr19	6132808	6134382	-	6132808	6133979	5pMXE	0.5	50	50	ENSMUST00000160357.2	ENSMUSG00000024792.10	Zfpl1	chr19	protein_coding	zinc finger like protein 1
chr19	6135868	6136432	+	6135519	6136432	A5SS	0.33	50	50	ENSMUST00000025704.3	ENSMUSG00000024791.11	Cdca5	chr19	protein_coding	cell division cycle associated 5
chr19	6135885	6136432	+	6135519	6136432	A5SS	0.33	50	50	ENSMUST00000025704.3	ENSMUSG00000024791.11	Cdca5	chr19	protein_coding	cell division cycle associated 5
chr19	6135885	6136432	+	6135868	6136432	A5SS	0.33	50	50	ENSMUST00000156961.8	ENSMUSG00000024791.11	Cdca5	chr19	protein_coding	cell division cycle associated 5
chr19	6146072	6147684	+	6145496	6147684	A5SS	0.5	50	50	ENSMUST00000235513.2	ENSMUSG00000117666.2	Gm550	chr19	protein_coding	predicted gene 550
chr19	6169984	6171409	-	6169984;6170773	6170516;6171409	ES	0.33	50	50	ENSMUST00000025702.14	ENSMUSG00000024787.15	Snx15	chr19	protein_coding	sorting nexin 15
chr19	6173980	6178079	-	6173980;6174218	6174183;6178079	ES	0.5	50	50	ENSMUST00000025702.14	ENSMUSG00000024787.15	Snx15	chr19	protein_coding	sorting nexin 15
chr19	6170773;6171239	6171131;6171409	-	6170773	6171409	cassetteExon	0.5	100	100	ENSMUST00000025702.14	ENSMUSG00000024787.15	Snx15	chr19	protein_coding	sorting nexin 15
chr19	6174218	6177743	-	6174218	6178079	A5SS	0.5	50	50	ENSMUST00000025702.14	ENSMUSG00000024787.15	Snx15	chr19	protein_coding	sorting nexin 15
chr19	6171239	6171409	-	6169984	6171409	A3SS	0.33	50	50	ENSMUST00000154601.8	ENSMUSG00000024787.15	Snx15	chr19	protein_coding	sorting nexin 15
chr19	6169984	6171409	-	6170773	6171409	3pMXE	0.33	50	50	ENSMUST00000124171.8	ENSMUSG00000024787.15	Snx15	chr19	protein_coding	sorting nexin 15
chr19	6173980	6178079	-	6174218	6178079	A3SS	0.5	50	50	ENSMUST00000129076.2	ENSMUSG00000024787.15	Snx15	chr19	protein_coding	sorting nexin 15
chr19	6187905	6189923	-	6187905;6188961	6188886;6189923	ES	0.5	50	50	ENSMUST00000236138.2	ENSMUSG00000024944.7	Arl2	chr19	protein_coding	ADP-ribosylation factor-like 2
chr19	6216602	6221339	+	6216602	6221336	A3SS	0.5	50	50	ENSMUST00000134150.8	ENSMUSG00000039699.15	Batf2	chr19	protein_coding	basic leucine zipper transcription factor, ATF-like 2
chr19	6214583	6216498	+	6211547	6216498	A5SS	0.2	50	50	ENSMUST00000134150.8	ENSMUSG00000039699.15	Batf2	chr19	protein_coding	basic leucine zipper transcription factor, ATF-like 2
chr19	6214780	6216498	+	6211547	6216498	A5SS	0.2	50	50	ENSMUST00000134150.8	ENSMUSG00000039699.15	Batf2	chr19	protein_coding	basic leucine zipper transcription factor, ATF-like 2
chr19	6215198	6216498	+	6211547	6216498	A5SS	0.2	50	50	ENSMUST00000134150.8	ENSMUSG00000039699.15	Batf2	chr19	protein_coding	basic leucine zipper transcription factor, ATF-like 2
chr19	6215598	6216498	+	6211547	6216498	A5SS	0.2	50	50	ENSMUST00000134150.8	ENSMUSG00000039699.15	Batf2	chr19	protein_coding	basic leucine zipper transcription factor, ATF-like 2
chr19	6214583;6215598	6215394;6216498	+	6214583	6216498	cassetteExon	0.5	100	100	ENSMUST00000045042.8	ENSMUSG00000039699.15	Batf2	chr19	protein_coding	basic leucine zipper transcription factor, ATF-like 2
chr19	6214780	6216498	+	6214583	6216498	A5SS	0.2	50	50	ENSMUST00000045042.8	ENSMUSG00000039699.15	Batf2	chr19	protein_coding	basic leucine zipper transcription factor, ATF-like 2
chr19	6215198	6216498	+	6214583	6216498	A5SS	0.2	50	50	ENSMUST00000045042.8	ENSMUSG00000039699.15	Batf2	chr19	protein_coding	basic leucine zipper transcription factor, ATF-like 2
chr19	6214780	6216498	+	6215198	6216498	A5SS	0.2	50	50	ENSMUST00000135461.8	ENSMUSG00000039699.15	Batf2	chr19	protein_coding	basic leucine zipper transcription factor, ATF-like 2
chr19	6215598	6216498	+	6215198	6216498	A5SS	0.2	50	50	ENSMUST00000135461.8	ENSMUSG00000039699.15	Batf2	chr19	protein_coding	basic leucine zipper transcription factor, ATF-like 2
chr19	6214780;6215198	6214906;6216498	+	6214780	6216498	cassetteExon	0.5	100	100	ENSMUST00000139326.8	ENSMUSG00000039699.15	Batf2	chr19	protein_coding	basic leucine zipper transcription factor, ATF-like 2
chr19	6215598	6216498	+	6214780	6216498	A5SS	0.2	50	50	ENSMUST00000139326.8	ENSMUSG00000039699.15	Batf2	chr19	protein_coding	basic leucine zipper transcription factor, ATF-like 2
chr19	6256293	6261634	+	6256293	6271703	A3SS	0.5	50	50	ENSMUST00000025699.9	ENSMUSG00000024786.10	Majin	chr19	protein_coding	membrane anchored junction protein
chr19	6265239	6271703	+	6256293	6271703	A5SS	0.5	50	50	ENSMUST00000025699.9	ENSMUSG00000024786.10	Majin	chr19	protein_coding	membrane anchored junction protein
chr19	6276455	6276647	+	6276455	6276808	A3SS	0.5	50	50	ENSMUST00000025698.14	ENSMUSG00000024784.14	Gpha2	chr19	protein_coding	glycoprotein hormone alpha 2
chr19	6284760	6285542	-	6285129	6285542	A3SS	0.5	50	50	ENSMUST00000025695.10	ENSMUSG00000024777.11	Ppp2r5b	chr19	protein_coding	protein phosphatase 2, regulatory subunit B', beta
chr19	6309015	6309174	+	6309015	6310019	A3SS	0.5	50	50	ENSMUST00000045351.13	ENSMUSG00000024773.16	Atg2a	chr19	protein_coding	autophagy related 2A
chr19	6305301	6305439	+	6305295	6305439	A5SS	0.5	50	50	ENSMUST00000045351.13	ENSMUSG00000024773.16	Atg2a	chr19	protein_coding	autophagy related 2A
chr19	6348005	6348104	+	6347727	6348104	A5SS	0.5	50	50	ENSMUST00000025684.4	ENSMUSG00000024772.10	Ehd1	chr19	protein_coding	EH-domain containing 1
chr19	6388991	6389717	+	6388991;6389533	6389369;6389717	ES	0.5	50	50	ENSMUST00000113502.10	ENSMUSG00000024947.18	Men1	chr19	protein_coding	multiple endocrine neoplasia 1
chr19	6387311	6387512	+	6387311	6387509	A3SS	0.5	50	50	ENSMUST00000113502.10	ENSMUSG00000024947.18	Men1	chr19	protein_coding	multiple endocrine neoplasia 1
chr19	6385112	6385475	+	6385100	6385475	A5SS	0.25	50	50	ENSMUST00000113502.10	ENSMUSG00000024947.18	Men1	chr19	protein_coding	multiple endocrine neoplasia 1
chr19	6385170	6385475	+	6385100	6385475	A5SS	0.25	50	50	ENSMUST00000113502.10	ENSMUSG00000024947.18	Men1	chr19	protein_coding	multiple endocrine neoplasia 1
chr19	6385355	6385475	+	6385100	6385475	A5SS	0.25	50	50	ENSMUST00000113502.10	ENSMUSG00000024947.18	Men1	chr19	protein_coding	multiple endocrine neoplasia 1
chr19	6385950	6386755	+	6385935	6386755	A5SS	0.5	50	50	ENSMUST00000113502.10	ENSMUSG00000024947.18	Men1	chr19	protein_coding	multiple endocrine neoplasia 1
chr19	6386858	6387183	+	6386963	6387183	A5SS	0.5	50	50	ENSMUST00000113502.10	ENSMUSG00000024947.18	Men1	chr19	protein_coding	multiple endocrine neoplasia 1
chr19	6385170	6385475	+	6385112	6385475	A5SS	0.25	50	50	ENSMUST00000079327.12	ENSMUSG00000024947.18	Men1	chr19	protein_coding	multiple endocrine neoplasia 1
chr19	6385355	6385475	+	6385112	6385475	A5SS	0.25	50	50	ENSMUST00000079327.12	ENSMUSG00000024947.18	Men1	chr19	protein_coding	multiple endocrine neoplasia 1
chr19	6385355	6385475	+	6385170	6385475	A5SS	0.25	50	50	ENSMUST00000237909.2	ENSMUSG00000024947.18	Men1	chr19	protein_coding	multiple endocrine neoplasia 1
chr19	6388991	6389717	+	6389533	6389717	A5SS	0.5	50	50	ENSMUST00000238038.2	ENSMUSG00000024947.18	Men1	chr19	protein_coding	multiple endocrine neoplasia 1
chr19	6392687	6393134	+	6392687;6392816	6392774;6393134	ES	0.5	50	50	ENSMUST00000133696.8	ENSMUSG00000024948.16	Map4k2	chr19	protein_coding	mitogen-activated protein kinase kinase kinase kinase 2
chr19	6393206	6393491	+	6393206;6393416	6393285;6393491	ES	0.5	50	50	ENSMUST00000133696.8	ENSMUSG00000024948.16	Map4k2	chr19	protein_coding	mitogen-activated protein kinase kinase kinase kinase 2
chr19	6391546	6391774	+	6391546	6391797	A3SS	0.33	50	50	ENSMUST00000133696.8	ENSMUSG00000024948.16	Map4k2	chr19	protein_coding	mitogen-activated protein kinase kinase kinase kinase 2
chr19	6391546	6391800	+	6391546	6391797	A3SS	0.33	50	50	ENSMUST00000133696.8	ENSMUSG00000024948.16	Map4k2	chr19	protein_coding	mitogen-activated protein kinase kinase kinase kinase 2
chr19	6393416	6393518	+	6393416	6393491	A3SS	0.5	50	50	ENSMUST00000133696.8	ENSMUSG00000024948.16	Map4k2	chr19	protein_coding	mitogen-activated protein kinase kinase kinase kinase 2
chr19	6403220	6403291	+	6403220	6403308	A3SS	0.5	50	50	ENSMUST00000133696.8	ENSMUSG00000024948.16	Map4k2	chr19	protein_coding	mitogen-activated protein kinase kinase kinase kinase 2
chr19	6403363	6403619	+	6403363	6403470	A3SS	0.5	50	50	ENSMUST00000133696.8	ENSMUSG00000024948.16	Map4k2	chr19	protein_coding	mitogen-activated protein kinase kinase kinase kinase 2
chr19	6396847	6401210	+	6396839	6401210	A5SS	0.5	50	50	ENSMUST00000133696.8	ENSMUSG00000024948.16	Map4k2	chr19	protein_coding	mitogen-activated protein kinase kinase kinase kinase 2
chr19	6391546	6391800	+	6391546	6391774	A3SS	0.33	50	50	ENSMUST00000025897.13	ENSMUSG00000024948.16	Map4k2	chr19	protein_coding	mitogen-activated protein kinase kinase kinase kinase 2
chr19	6392687	6393134	+	6392687	6392774	3pMXE	0.5	50	50	ENSMUST00000148410.8	ENSMUSG00000024948.16	Map4k2	chr19	protein_coding	mitogen-activated protein kinase kinase kinase kinase 2
chr19	6393206	6393491	+	6393206	6393285	A3SS&ES	0.5	50	50	ENSMUST00000142496.8	ENSMUSG00000024948.16	Map4k2	chr19	protein_coding	mitogen-activated protein kinase kinase kinase kinase 2
chr19	6410811	6413637	-	6410811	6413358	5pMXE	0.5	50	50	ENSMUST00000129675.8	ENSMUSG00000079467.9	Gm14966	chr19	lncRNA	predicted gene 14966
chr19	6415822	6421297	+	6415822;6418469	6418394;6421297	ES	0.33	50	50	ENSMUST00000131252.8	ENSMUSG00000024949.18	Sf1	chr19	protein_coding	splicing factor 1
chr19	6424313	6424555	+	6424313	6424579	A3SS	0.33	50	50	ENSMUST00000131252.8	ENSMUSG00000024949.18	Sf1	chr19	protein_coding	splicing factor 1
chr19	6424313	6424584	+	6424313	6424579	A3SS	0.33	50	50	ENSMUST00000131252.8	ENSMUSG00000024949.18	Sf1	chr19	protein_coding	splicing factor 1
chr19	6424638	6424850	+	6424638	6424749	A3SS	0.5	50	50	ENSMUST00000131252.8	ENSMUSG00000024949.18	Sf1	chr19	protein_coding	splicing factor 1
chr19	6424928	6426326	+	6424928	6425688	A3SS	0.5	50	50	ENSMUST00000131252.8	ENSMUSG00000024949.18	Sf1	chr19	protein_coding	splicing factor 1
chr19	6414400	6415694	+	6414148	6415694	A5SS	0.33	50	50	ENSMUST00000131252.8	ENSMUSG00000024949.18	Sf1	chr19	protein_coding	splicing factor 1
chr19	6414736	6415694	+	6414148	6415694	A5SS	0.33	50	50	ENSMUST00000131252.8	ENSMUSG00000024949.18	Sf1	chr19	protein_coding	splicing factor 1
chr19	6415985	6418394	+	6415822	6418394	A5SS	0.5	50	50	ENSMUST00000131252.8	ENSMUSG00000024949.18	Sf1	chr19	protein_coding	splicing factor 1
chr19	6420292	6421297	+	6418469	6421297	A5SS	0.33	50	50	ENSMUST00000131252.8	ENSMUSG00000024949.18	Sf1	chr19	protein_coding	splicing factor 1
chr19	6424317	6424579	+	6424313	6424579	A5SS	0.5	50	50	ENSMUST00000131252.8	ENSMUSG00000024949.18	Sf1	chr19	protein_coding	splicing factor 1
chr19	6424928;6425892	6425688;6426326	+	6424928	6426326	cassetteExon	0.5	100	100	ENSMUST00000113489.8	ENSMUSG00000024949.18	Sf1	chr19	protein_coding	splicing factor 1
chr19	6420292	6421297	+	6415822	6421297	A5SS	0.33	50	50	ENSMUST00000113485.9	ENSMUSG00000024949.18	Sf1	chr19	protein_coding	splicing factor 1
chr19	6414736	6415694	+	6414400	6415694	A5SS	0.33	50	50	ENSMUST00000144409.8	ENSMUSG00000024949.18	Sf1	chr19	protein_coding	splicing factor 1
chr19	6424313	6424584	+	6424313	6424555	A3SS	0.33	50	50	ENSMUST00000124667.2	ENSMUSG00000024949.18	Sf1	chr19	protein_coding	splicing factor 1
chr19	6434751	6436137	+	6434751	6435715	A3SS&ES	0.5	50	50	ENSMUST00000035269.15	ENSMUSG00000032648.15	Pygm	chr19	protein_coding	muscle glycogen phosphorylase
chr19	6453593;6454125	6454048;6454330	+	6453593	6454330	cassetteExon	0.5	100	100	ENSMUST00000113476.8	ENSMUSG00000032946.17	Rasgrp2	chr19	protein_coding	RAS, guanyl releasing protein 2
chr19	6451893	6452243	+	6451893	6452502	A3SS	0.25	50	50	ENSMUST00000113476.8	ENSMUSG00000032946.17	Rasgrp2	chr19	protein_coding	RAS, guanyl releasing protein 2
chr19	6451893	6452582	+	6451893	6452502	A3SS	0.25	50	50	ENSMUST00000113476.8	ENSMUSG00000032946.17	Rasgrp2	chr19	protein_coding	RAS, guanyl releasing protein 2
chr19	6451893	6453061	+	6451893	6452502	A3SS&ES	0.25	50	50	ENSMUST00000113476.8	ENSMUSG00000032946.17	Rasgrp2	chr19	protein_coding	RAS, guanyl releasing protein 2
chr19	6449841	6451751	+	6449547	6451751	A5SS	0.2	50	50	ENSMUST00000113476.8	ENSMUSG00000032946.17	Rasgrp2	chr19	protein_coding	RAS, guanyl releasing protein 2
chr19	6449994	6451751	+	6449547	6451751	A5SS	0.2	50	50	ENSMUST00000113476.8	ENSMUSG00000032946.17	Rasgrp2	chr19	protein_coding	RAS, guanyl releasing protein 2
chr19	6450654	6451751	+	6449547	6451751	A5SS	0.2	50	50	ENSMUST00000113476.8	ENSMUSG00000032946.17	Rasgrp2	chr19	protein_coding	RAS, guanyl releasing protein 2
chr19	6450681	6451751	+	6449547	6451751	A5SS	0.2	50	50	ENSMUST00000113476.8	ENSMUSG00000032946.17	Rasgrp2	chr19	protein_coding	RAS, guanyl releasing protein 2
chr19	6449994	6451751	+	6449841	6451751	A5SS	0.2	50	50	ENSMUST00000113468.8	ENSMUSG00000032946.17	Rasgrp2	chr19	protein_coding	RAS, guanyl releasing protein 2
chr19	6450654	6451751	+	6449841	6451751	A5SS	0.2	50	50	ENSMUST00000113468.8	ENSMUSG00000032946.17	Rasgrp2	chr19	protein_coding	RAS, guanyl releasing protein 2
chr19	6450681	6451751	+	6449841	6451751	A5SS	0.2	50	50	ENSMUST00000113468.8	ENSMUSG00000032946.17	Rasgrp2	chr19	protein_coding	RAS, guanyl releasing protein 2
chr19	6449994	6451751	+	6449994	6451746	A3SS	0.5	50	50	ENSMUST00000146601.8	ENSMUSG00000032946.17	Rasgrp2	chr19	protein_coding	RAS, guanyl releasing protein 2
chr19	6450654	6451746	+	6449994	6451746	A5SS	0.33	50	50	ENSMUST00000146601.8	ENSMUSG00000032946.17	Rasgrp2	chr19	protein_coding	RAS, guanyl releasing protein 2
chr19	6450681	6451746	+	6449994	6451746	A5SS	0.33	50	50	ENSMUST00000146601.8	ENSMUSG00000032946.17	Rasgrp2	chr19	protein_coding	RAS, guanyl releasing protein 2
chr19	6450654	6451751	+	6449994	6451751	A5SS	0.2	50	50	ENSMUST00000150713.8	ENSMUSG00000032946.17	Rasgrp2	chr19	protein_coding	RAS, guanyl releasing protein 2
chr19	6450681	6451751	+	6449994	6451751	A5SS	0.2	50	50	ENSMUST00000150713.8	ENSMUSG00000032946.17	Rasgrp2	chr19	protein_coding	RAS, guanyl releasing protein 2
chr19	6451893	6452582	+	6451893	6452243	3pMXE	0.25	50	50	ENSMUST00000123661.8	ENSMUSG00000032946.17	Rasgrp2	chr19	protein_coding	RAS, guanyl releasing protein 2
chr19	6451893	6453061	+	6451893	6452243	3pMXE	0.25	50	50	ENSMUST00000123661.8	ENSMUSG00000032946.17	Rasgrp2	chr19	protein_coding	RAS, guanyl releasing protein 2
chr19	6450654	6451746	+	6450654	6451751	A3SS	0.5	50	50	ENSMUST00000145611.2	ENSMUSG00000032946.17	Rasgrp2	chr19	protein_coding	RAS, guanyl releasing protein 2
chr19	6450681	6451751	+	6450654	6451751	A5SS	0.2	50	50	ENSMUST00000145611.2	ENSMUSG00000032946.17	Rasgrp2	chr19	protein_coding	RAS, guanyl releasing protein 2
chr19	6450681	6451751	+	6450681	6451746	A3SS	0.5	50	50	ENSMUST00000127021.8	ENSMUSG00000032946.17	Rasgrp2	chr19	protein_coding	RAS, guanyl releasing protein 2
chr19	6451893	6453061	+	6451893	6452582	A3SS&ES	0.25	50	50	ENSMUST00000127021.8	ENSMUSG00000032946.17	Rasgrp2	chr19	protein_coding	RAS, guanyl releasing protein 2
chr19	6450654	6451746	+	6450681	6451746	A5SS	0.33	50	50	ENSMUST00000127021.8	ENSMUSG00000032946.17	Rasgrp2	chr19	protein_coding	RAS, guanyl releasing protein 2
chr19	6493678	6500558	+	6493678;6498314	6498285;6500558	ES	0.33	50	50	ENSMUST00000113462.8	ENSMUSG00000033768.18	Nrxn2	chr19	protein_coding	neurexin II
chr19	6498314	6505009	+	6498314;6500629	6500558;6505009	ES	0.33	50	50	ENSMUST00000113462.8	ENSMUSG00000033768.18	Nrxn2	chr19	protein_coding	neurexin II
chr19	6505310	6522288	+	6505310;6513877	6513854;6522288	ES	0.33	50	50	ENSMUST00000113462.8	ENSMUSG00000033768.18	Nrxn2	chr19	protein_coding	neurexin II
chr19	6531905	6540097	+	6531905;6538840	6538814;6540097	ES	0.5	50	50	ENSMUST00000113462.8	ENSMUSG00000033768.18	Nrxn2	chr19	protein_coding	neurexin II
chr19	6559979	6566953	+	6559979;6563835	6563746;6566953	ES	0.5	50	50	ENSMUST00000113462.8	ENSMUSG00000033768.18	Nrxn2	chr19	protein_coding	neurexin II
chr19	6569357	6592371	+	6569357	6581298	3pMXE	0.33	50	50	ENSMUST00000113462.8	ENSMUSG00000033768.18	Nrxn2	chr19	protein_coding	neurexin II
chr19	6498314	6500561	+	6498314	6500558	A3SS	0.33	50	50	ENSMUST00000113462.8	ENSMUSG00000033768.18	Nrxn2	chr19	protein_coding	neurexin II
chr19	6513877	6514051	+	6513877	6522288	A3SS	0.5	50	50	ENSMUST00000113462.8	ENSMUSG00000033768.18	Nrxn2	chr19	protein_coding	neurexin II
chr19	6543485	6547969	+	6543485	6554905	A3SS	0.5	50	50	ENSMUST00000113462.8	ENSMUSG00000033768.18	Nrxn2	chr19	protein_coding	neurexin II
chr19	6569357	6581874	+	6569357	6581298	A3SS	0.33	50	50	ENSMUST00000113462.8	ENSMUSG00000033768.18	Nrxn2	chr19	protein_coding	neurexin II
chr19	6495605	6498285	+	6493678	6498285	A5SS	0.5	50	50	ENSMUST00000113462.8	ENSMUSG00000033768.18	Nrxn2	chr19	protein_coding	neurexin II
chr19	6496451	6500558	+	6498314	6500558	A5SS&ES	0.33	50	50	ENSMUST00000113462.8	ENSMUSG00000033768.18	Nrxn2	chr19	protein_coding	neurexin II
chr19	6513898	6522288	+	6513877	6522288	A5SS	0.33	50	50	ENSMUST00000113462.8	ENSMUSG00000033768.18	Nrxn2	chr19	protein_coding	neurexin II
chr19	6523220	6523348	+	6522449	6523348	A5SS	0.5	50	50	ENSMUST00000113462.8	ENSMUSG00000033768.18	Nrxn2	chr19	protein_coding	neurexin II
chr19	6548561	6554905	+	6543485	6554905	A5SS	0.5	50	50	ENSMUST00000113462.8	ENSMUSG00000033768.18	Nrxn2	chr19	protein_coding	neurexin II
chr19	6505310	6522288	+	6505310	6513854	3pMXE	0.5	50	50	ENSMUST00000128272.8	ENSMUSG00000033768.18	Nrxn2	chr19	protein_coding	neurexin II
chr19	6493678;6498314	6498285;6505009	+	6493678	6505009	cassetteExon	0.5	100	100	ENSMUST00000128272.8	ENSMUSG00000033768.18	Nrxn2	chr19	protein_coding	neurexin II
chr19	6493678;6500629	6500558;6505009	+	6493678	6505009	cassetteExon	0.5	100	100	ENSMUST00000128272.8	ENSMUSG00000033768.18	Nrxn2	chr19	protein_coding	neurexin II
chr19	6569357	6592371	+	6569357	6581874	3pMXE	0.33	50	50	ENSMUST00000077182.13	ENSMUSG00000033768.18	Nrxn2	chr19	protein_coding	neurexin II
chr19	6505310;6513898	6513854;6522288	+	6505310	6522288	cassetteExon	0.5	100	100	ENSMUST00000077182.13	ENSMUSG00000033768.18	Nrxn2	chr19	protein_coding	neurexin II
chr19	6493678;6500629	6500558;6505009	+	6493678;6498314	6498285;6505009	MXE	0.5	100	100	ENSMUST00000113461.8	ENSMUSG00000033768.18	Nrxn2	chr19	protein_coding	neurexin II
chr19	6498314;6500629	6500561;6505009	+	6498314	6505009	cassetteExon	0.5	100	100	ENSMUST00000113461.8	ENSMUSG00000033768.18	Nrxn2	chr19	protein_coding	neurexin II
chr19	6496451	6500558	+	6493678	6500558	A5SS	0.33	50	50	ENSMUST00000155158.3	ENSMUSG00000033768.18	Nrxn2	chr19	protein_coding	neurexin II
chr19	6498314	6505009	+	6500629	6505009	A5SS&ES	0.5	50	50	ENSMUST00000124815.8	ENSMUSG00000033768.18	Nrxn2	chr19	protein_coding	neurexin II
chr19	6581293	6581775	-	6581293	6581879	A5SS	0.5	50	50	ENSMUST00000149574.2	ENSMUSG00000052188.7	Gm14964	chr19	lncRNA	predicted gene 14964
chr19	6588829	6590605	-	6588829;6590527	6590359;6590605	ES	0.5	50	50	ENSMUST00000113451.9	ENSMUSG00000061742.13	Slc22a12	chr19	protein_coding	solute carrier family 22 (organic anion/cation transporter), member 12
chr19	6591193	6591543	-	6591193	6592381	A5SS	0.5	50	50	ENSMUST00000113451.9	ENSMUSG00000061742.13	Slc22a12	chr19	protein_coding	solute carrier family 22 (organic anion/cation transporter), member 12
chr19	6588829	6591090	-	6588829;6590759	6590605;6591090	ES	0.5	50	50	ENSMUST00000129698.2	ENSMUSG00000061742.13	Slc22a12	chr19	protein_coding	solute carrier family 22 (organic anion/cation transporter), member 12
chr19	6588829;6590759	6590359;6591090	-	6588829	6591090	cassetteExon	0.5	100	100	ENSMUST00000126142.2	ENSMUSG00000061742.13	Slc22a12	chr19	protein_coding	solute carrier family 22 (organic anion/cation transporter), member 12
chr19	6817046;6817369	6817277;6817702	-	6817046	6817702	cassetteExon	0.5	100	100	ENSMUST00000239527.1	ENSMUSG00000118668.1	Rps6ka4	chr19	protein_coding	--
chr19	6817046	6817748	-	6817046	6817702	A5SS	0.33	50	50	ENSMUST00000239527.1	ENSMUSG00000118668.1	Rps6ka4	chr19	protein_coding	--
chr19	6817046	6817277	-	6817046	6817748	A5SS	0.33	50	50	ENSMUST00000239529.1	ENSMUSG00000118668.1	Rps6ka4	chr19	protein_coding	--
chr19	6832256	6832724	-	6832256	6832574	5pMXE	0.5	50	50	ENSMUST00000236028.2	ENSMUSG00000047810.10	Ccdc88b	chr19	protein_coding	coiled-coil domain containing 88B
chr19	6824137	6824787	-	6824137	6824645	A5SS	0.5	50	50	ENSMUST00000236028.2	ENSMUSG00000047810.10	Ccdc88b	chr19	protein_coding	coiled-coil domain containing 88B
chr19	6884488	6884610	-	6884495	6884610	A3SS	0.5	50	50	ENSMUST00000145300.2	ENSMUSG00000024953.18	Prdx5	chr19	protein_coding	peroxiredoxin 5
chr19	6884648	6885350	-	6884648;6885041	6884910;6885350	ES	0.5	50	50	ENSMUST00000238095.2	ENSMUSG00000024953.18	Prdx5	chr19	protein_coding	peroxiredoxin 5
chr19	6897767	6898990	-	6897767	6898383	5pMXE	0.5	50	50	ENSMUST00000172975.3	ENSMUSG00000024955.16	Esrra	chr19	protein_coding	estrogen related receptor, alpha
chr19	6891316;6891563	6891447;6897431	-	6891316	6897431	cassetteExon	0.5	100	100	ENSMUST00000172975.3	ENSMUSG00000024955.16	Esrra	chr19	protein_coding	estrogen related receptor, alpha
chr19	6891563	6898990	-	6891563;6897767	6897431;6898990	ES	0.33	50	50	ENSMUST00000239322.2	ENSMUSG00000024955.16	Esrra	chr19	protein_coding	estrogen related receptor, alpha
chr19	6891660	6898990	-	6897767	6898990	A3SS&ES	0.33	50	50	ENSMUST00000239322.2	ENSMUSG00000024955.16	Esrra	chr19	protein_coding	estrogen related receptor, alpha
chr19	6891316;6897767	6897431;6898990	-	6891316;6891563	6891447;6898990	MXE	0.5	100	100	ENSMUST00000173635.2	ENSMUSG00000024955.16	Esrra	chr19	protein_coding	estrogen related receptor, alpha
chr19	6891660	6898990	-	6891563	6898990	A3SS	0.33	50	50	ENSMUST00000173635.2	ENSMUSG00000024955.16	Esrra	chr19	protein_coding	estrogen related receptor, alpha
chr19	6891316;6897767	6897431;6898990	-	6891316;6891660	6891447;6898990	MXE	0.5	100	100	ENSMUST00000173308.2	ENSMUSG00000024955.16	Esrra	chr19	protein_coding	estrogen related receptor, alpha
chr19	6891563	6898990	-	6897767	6898990	3pMXE	0.33	50	50	ENSMUST00000145192.4	ENSMUSG00000024955.16	Esrra	chr19	protein_coding	estrogen related receptor, alpha
chr19	6900028;6900735	6900669;6902162	-	6900028	6902162	cassetteExon	0.5	100	100	ENSMUST00000237586.2	ENSMUSG00000050623.6	Catsperz	chr19	protein_coding	cation channel sperm associated auxiliary subunit zeta
chr19	6900028;6900967	6900669;6902162	-	6900028	6902162	cassetteExon	0.5	100	100	ENSMUST00000237586.2	ENSMUSG00000050623.6	Catsperz	chr19	protein_coding	cation channel sperm associated auxiliary subunit zeta
chr19	6900028;6901053	6900669;6902162	-	6900028	6902162	cassetteExon	0.5	100	100	ENSMUST00000237586.2	ENSMUSG00000050623.6	Catsperz	chr19	protein_coding	cation channel sperm associated auxiliary subunit zeta
chr19	6900735	6902162	-	6900735;6900967	6900891;6902162	ES	0.25	50	50	ENSMUST00000237380.2	ENSMUSG00000050623.6	Catsperz	chr19	protein_coding	cation channel sperm associated auxiliary subunit zeta
chr19	6901053	6902162	-	6900967	6902162	A3SS	0.25	50	50	ENSMUST00000237380.2	ENSMUSG00000050623.6	Catsperz	chr19	protein_coding	cation channel sperm associated auxiliary subunit zeta
chr19	6902474	6902660	-	6902517	6902660	A3SS	0.5	50	50	ENSMUST00000237380.2	ENSMUSG00000050623.6	Catsperz	chr19	protein_coding	cation channel sperm associated auxiliary subunit zeta
chr19	6900735	6900860	-	6900735	6900891	A5SS	0.33	50	50	ENSMUST00000237380.2	ENSMUSG00000050623.6	Catsperz	chr19	protein_coding	cation channel sperm associated auxiliary subunit zeta
chr19	6900735	6902162	-	6900967	6902162	A3SS	0.25	50	50	ENSMUST00000237563.2	ENSMUSG00000050623.6	Catsperz	chr19	protein_coding	cation channel sperm associated auxiliary subunit zeta
chr19	6900735;6900967	6900860;6902162	-	6900735	6902162	cassetteExon	0.5	100	100	ENSMUST00000237743.2	ENSMUSG00000050623.6	Catsperz	chr19	protein_coding	cation channel sperm associated auxiliary subunit zeta
chr19	6900735;6901053	6900860;6902162	-	6900735	6902162	cassetteExon	0.5	100	100	ENSMUST00000237743.2	ENSMUSG00000050623.6	Catsperz	chr19	protein_coding	cation channel sperm associated auxiliary subunit zeta
chr19	6900735;6901053	6900891;6902162	-	6900735	6902162	cassetteExon	0.5	100	100	ENSMUST00000237743.2	ENSMUSG00000050623.6	Catsperz	chr19	protein_coding	cation channel sperm associated auxiliary subunit zeta
chr19	6903743	6904459	-	6903743	6904279	5pMXE	0.5	50	50	ENSMUST00000237766.2	ENSMUSG00000024957.10	Kcnk4	chr19	protein_coding	potassium channel, subfamily K, member 4
chr19	6905522	6910071	-	6905522;6905776	6905650;6910071	ES	0.33	50	50	ENSMUST00000025908.8	ENSMUSG00000024957.10	Kcnk4	chr19	protein_coding	potassium channel, subfamily K, member 4
chr19	6905776;6906559	6906481;6910071	-	6905776	6910071	cassetteExon	0.5	100	100	ENSMUST00000025908.8	ENSMUSG00000024957.10	Kcnk4	chr19	protein_coding	potassium channel, subfamily K, member 4
chr19	6910336	6910519	-	6910336	6911716	A5SS	0.5	50	50	ENSMUST00000025908.8	ENSMUSG00000024957.10	Kcnk4	chr19	protein_coding	potassium channel, subfamily K, member 4
chr19	6906559	6910071	-	6905522	6910071	A3SS	0.33	50	50	ENSMUST00000237484.2	ENSMUSG00000024957.10	Kcnk4	chr19	protein_coding	potassium channel, subfamily K, member 4
chr19	6905522	6910071	-	6905776	6910071	3pMXE	0.33	50	50	ENSMUST00000235248.2	ENSMUSG00000024957.10	Kcnk4	chr19	protein_coding	potassium channel, subfamily K, member 4
chr19	6905776	6910071	-	6906559	6910071	3pMXE	0.33	50	50	ENSMUST00000236443.2	ENSMUSG00000024957.10	Kcnk4	chr19	protein_coding	potassium channel, subfamily K, member 4
chr19	6916778	6917720	-	6916778;6917122	6916897;6917720	ES	0.33	50	50	ENSMUST00000166115.9	ENSMUSG00000024958.14	Gpr137	chr19	protein_coding	G protein-coupled receptor 137
chr19	6916504	6916629	-	6916508	6916629	A3SS	0.5	50	50	ENSMUST00000166115.9	ENSMUSG00000024958.14	Gpr137	chr19	protein_coding	G protein-coupled receptor 137
chr19	6917054	6917720	-	6917122	6917720	A3SS	0.33	50	50	ENSMUST00000166115.9	ENSMUSG00000024958.14	Gpr137	chr19	protein_coding	G protein-coupled receptor 137
chr19	6917850	6918290	-	6917850	6919365	A5SS	0.25	50	50	ENSMUST00000236348.2	ENSMUSG00000024958.14	Gpr137	chr19	protein_coding	G protein-coupled receptor 137
chr19	6917850	6918460	-	6917850	6919365	A5SS	0.25	50	50	ENSMUST00000236348.2	ENSMUSG00000024958.14	Gpr137	chr19	protein_coding	G protein-coupled receptor 137
chr19	6917850	6919292	-	6917850	6919365	A5SS	0.25	50	50	ENSMUST00000236348.2	ENSMUSG00000024958.14	Gpr137	chr19	protein_coding	G protein-coupled receptor 137
chr19	6917850	6918460	-	6917850;6918317	6918290;6918460	ES	0.5	50	50	ENSMUST00000099774.10	ENSMUSG00000024958.14	Gpr137	chr19	protein_coding	G protein-coupled receptor 137
chr19	6916778;6917054	6916897;6917720	-	6916778	6917720	cassetteExon	0.5	100	100	ENSMUST00000099774.10	ENSMUSG00000024958.14	Gpr137	chr19	protein_coding	G protein-coupled receptor 137
chr19	6916778	6917851	-	6916778	6916897	A5SS&ES	0.33	50	50	ENSMUST00000238183.2	ENSMUSG00000024958.14	Gpr137	chr19	protein_coding	G protein-coupled receptor 137
chr19	6917850	6918290	-	6917850	6919292	A5SS	0.25	50	50	ENSMUST00000099782.10	ENSMUSG00000024958.14	Gpr137	chr19	protein_coding	G protein-coupled receptor 137
chr19	6917850	6918460	-	6917850	6919292	A5SS	0.25	50	50	ENSMUST00000099782.10	ENSMUSG00000024958.14	Gpr137	chr19	protein_coding	G protein-coupled receptor 137
chr19	6916778;6917769	6917720;6917851	-	6916778	6917851	cassetteExon	0.5	100	100	ENSMUST00000099776.6	ENSMUSG00000024958.14	Gpr137	chr19	protein_coding	G protein-coupled receptor 137
chr19	6916778	6917851	-	6916778	6917720	A5SS	0.33	50	50	ENSMUST00000238128.2	ENSMUSG00000024958.14	Gpr137	chr19	protein_coding	G protein-coupled receptor 137
chr19	6916778	6917720	-	6917122	6917720	3pMXE	0.33	50	50	ENSMUST00000235363.2	ENSMUSG00000024958.14	Gpr137	chr19	protein_coding	G protein-coupled receptor 137
chr19	6928198	6928317	+	6928198	6928767	A3SS	0.25	50	50	ENSMUST00000025910.13	ENSMUSG00000024959.15	Bad	chr19	protein_coding	BCL2-associated agonist of cell death
chr19	6928198	6928639	+	6928198	6928767	A3SS	0.25	50	50	ENSMUST00000025910.13	ENSMUSG00000024959.15	Bad	chr19	protein_coding	BCL2-associated agonist of cell death
chr19	6928198	6929010	+	6928198	6928767	A3SS	0.25	50	50	ENSMUST00000025910.13	ENSMUSG00000024959.15	Bad	chr19	protein_coding	BCL2-associated agonist of cell death
chr19	6919837	6920235	+	6919808	6920235	A5SS	0.33	50	50	ENSMUST00000025910.13	ENSMUSG00000024959.15	Bad	chr19	protein_coding	BCL2-associated agonist of cell death
chr19	6919992	6920235	+	6919808	6920235	A5SS	0.33	50	50	ENSMUST00000025910.13	ENSMUSG00000024959.15	Bad	chr19	protein_coding	BCL2-associated agonist of cell death
chr19	6928198	6928317	+	6928198	6929010	A3SS	0.25	50	50	ENSMUST00000113426.8	ENSMUSG00000024959.15	Bad	chr19	protein_coding	BCL2-associated agonist of cell death
chr19	6928198	6928639	+	6928198	6929010	A3SS	0.25	50	50	ENSMUST00000113426.8	ENSMUSG00000024959.15	Bad	chr19	protein_coding	BCL2-associated agonist of cell death
chr19	6919992	6920235	+	6919837	6920235	A5SS	0.33	50	50	ENSMUST00000238184.2	ENSMUSG00000024959.15	Bad	chr19	protein_coding	BCL2-associated agonist of cell death
chr19	6928198	6928639	+	6928198	6928317	3pMXE	0.25	50	50	ENSMUST00000141410.2	ENSMUSG00000024959.15	Bad	chr19	protein_coding	BCL2-associated agonist of cell death
chr19	6944077	6953773	-	6944077	6946915	5pMXE	0.33	50	50	ENSMUST00000025912.10	ENSMUSG00000024960.10	Plcb3	chr19	protein_coding	phospholipase C, beta 3
chr19	6943597	6946915	-	6944077	6946915	A3SS&ES	0.5	50	50	ENSMUST00000025912.10	ENSMUSG00000024960.10	Plcb3	chr19	protein_coding	phospholipase C, beta 3
chr19	6940822	6940911	-	6940822	6941741	A5SS	0.5	50	50	ENSMUST00000025912.10	ENSMUSG00000024960.10	Plcb3	chr19	protein_coding	phospholipase C, beta 3
chr19	6942765	6942875	-	6942765	6942877	A5SS	0.5	50	50	ENSMUST00000025912.10	ENSMUSG00000024960.10	Plcb3	chr19	protein_coding	phospholipase C, beta 3
chr19	6944077	6946753	-	6944077	6946915	A5SS	0.33	50	50	ENSMUST00000025912.10	ENSMUSG00000024960.10	Plcb3	chr19	protein_coding	phospholipase C, beta 3
chr19	6944077	6946753	-	6944077	6953773	A5SS	0.33	50	50	ENSMUST00000235352.2	ENSMUSG00000024960.10	Plcb3	chr19	protein_coding	phospholipase C, beta 3
chr19	6953995	6954283	+	6953995	6954226	A3SS&ES	0.5	50	50	ENSMUST00000070850.8	ENSMUSG00000056612.8	Ppp1r14b	chr19	protein_coding	protein phosphatase 1, regulatory inhibitor subunit 14B
chr19	6952985	6953912	+	6952874	6953912	A5SS	0.5	50	50	ENSMUST00000070850.8	ENSMUSG00000056612.8	Ppp1r14b	chr19	protein_coding	protein phosphatase 1, regulatory inhibitor subunit 14B
chr19	6956509	6957762	-	6956545	6957762	A3SS	0.5	50	50	ENSMUST00000070878.9	ENSMUSG00000056629.17	Fkbp2	chr19	protein_coding	FK506 binding protein 2
chr19	6956545	6956682	-	6956545	6957762	A5SS	0.5	50	50	ENSMUST00000070878.9	ENSMUSG00000056629.17	Fkbp2	chr19	protein_coding	FK506 binding protein 2
chr19	6956509	6956682	-	6956509	6957762	A5SS	0.5	50	50	ENSMUST00000177752.9	ENSMUSG00000056629.17	Fkbp2	chr19	protein_coding	FK506 binding protein 2
chr19	6956509	6956682	-	6956545	6956682	A3SS	0.5	50	50	ENSMUST00000238181.2	ENSMUSG00000056629.17	Fkbp2	chr19	protein_coding	FK506 binding protein 2
chr19	6962964	6963173	-	6962863	6963173	A3SS	0.5	50	50	ENSMUST00000130048.8	ENSMUSG00000024962.14	Vegfb	chr19	protein_coding	vascular endothelial growth factor B
chr19	6966955	6967049	-	6966952	6967049	A3SS	0.5	50	50	ENSMUST00000179118.2	ENSMUSG00000024963.13	Dnajc4	chr19	protein_coding	DnaJ heat shock protein family (Hsp40) member C4
chr19	6968199	6969527	-	6968179	6969527	A3SS	0.5	50	50	ENSMUST00000179118.2	ENSMUSG00000024963.13	Dnajc4	chr19	protein_coding	DnaJ heat shock protein family (Hsp40) member C4
chr19	6973103	6973383	-	6973103	6973376	A5SS	0.5	50	50	ENSMUST00000041686.10	ENSMUSG00000037349.10	Nudt22	chr19	protein_coding	nudix (nucleoside diphosphate linked moiety X)-type motif 22
chr19	6974145;6975470	6975301;6975560	+	6974145	6975560	cassetteExon	0.5	100	100	ENSMUST00000237234.2	ENSMUSG00000047656.10	Trpt1	chr19	protein_coding	tRNA phosphotransferase 1
chr19	6991815	6996034	-	6991815;6992218	6991985;6996034	ES	0.5	50	50	ENSMUST00000040772.9	ENSMUSG00000024965.10	Fermt3	chr19	protein_coding	fermitin family member 3
chr19	6980943;6981124	6981048;6991216	-	6980943	6991216	cassetteExon	0.5	100	100	ENSMUST00000040772.9	ENSMUSG00000024965.10	Fermt3	chr19	protein_coding	fermitin family member 3
chr19	6979820	6979948	-	6979820	6979938	A5SS	0.5	50	50	ENSMUST00000040772.9	ENSMUSG00000024965.10	Fermt3	chr19	protein_coding	fermitin family member 3
chr19	7181816	7183012	-	7181816	7183567	A5SS	0.33	50	50	ENSMUST00000025679.11	ENSMUSG00000024767.12	Otub1	chr19	protein_coding	OTU domain, ubiquitin aldehyde binding 1
chr19	7181816	7183462	-	7181816	7183567	A5SS	0.33	50	50	ENSMUST00000025679.11	ENSMUSG00000024767.12	Otub1	chr19	protein_coding	OTU domain, ubiquitin aldehyde binding 1
chr19	7181816	7183012	-	7181816	7183462	A5SS	0.33	50	50	ENSMUST00000123594.8	ENSMUSG00000024767.12	Otub1	chr19	protein_coding	OTU domain, ubiquitin aldehyde binding 1
chr19	7192849;7193914	7193846;7194764	-	7192849	7194764	cassetteExon	0.5	100	100	ENSMUST00000039758.6	ENSMUSG00000035885.6	Cox8a	chr19	protein_coding	cytochrome c oxidase subunit 8A
chr19	7254815	7257351	-	7254815;7255451	7255407;7257351	ES	0.33	50	50	ENSMUST00000032557.15	ENSMUSG00000024969.16	Mark2	chr19	protein_coding	MAP/microtubule affinity regulating kinase 2
chr19	7255451	7258363	-	7255451;7257377	7257351;7258363	ES	0.25	50	50	ENSMUST00000032557.15	ENSMUSG00000024969.16	Mark2	chr19	protein_coding	MAP/microtubule affinity regulating kinase 2
chr19	7255451;7256643	7256476;7257351	-	7255451	7257351	cassetteExon	0.5	100	100	ENSMUST00000032557.15	ENSMUSG00000024969.16	Mark2	chr19	protein_coding	MAP/microtubule affinity regulating kinase 2
chr19	7255451;7256643	7256476;7258363	-	7255451;7257377	7257351;7258363	MXE	0.5	100	100	ENSMUST00000032557.15	ENSMUSG00000024969.16	Mark2	chr19	protein_coding	MAP/microtubule affinity regulating kinase 2
chr19	7258620;7259324	7259163;7260091	-	7258620	7260091	cassetteExon	0.5	100	100	ENSMUST00000032557.15	ENSMUSG00000024969.16	Mark2	chr19	protein_coding	MAP/microtubule affinity regulating kinase 2
chr19	7260183	7260398	-	7260188	7260398	A3SS	0.5	50	50	ENSMUST00000032557.15	ENSMUSG00000024969.16	Mark2	chr19	protein_coding	MAP/microtubule affinity regulating kinase 2
chr19	7268147	7272403	-	7268147	7318533	A5SS	0.25	50	50	ENSMUST00000032557.15	ENSMUSG00000024969.16	Mark2	chr19	protein_coding	MAP/microtubule affinity regulating kinase 2
chr19	7268147	7318956	-	7268147	7318533	A5SS	0.25	50	50	ENSMUST00000032557.15	ENSMUSG00000024969.16	Mark2	chr19	protein_coding	MAP/microtubule affinity regulating kinase 2
chr19	7268147	7319132	-	7268147	7318533	A5SS	0.25	50	50	ENSMUST00000032557.15	ENSMUSG00000024969.16	Mark2	chr19	protein_coding	MAP/microtubule affinity regulating kinase 2
chr19	7254815	7258363	-	7254815;7255451	7255407;7258363	ES	0.25	50	50	ENSMUST00000164205.8	ENSMUSG00000024969.16	Mark2	chr19	protein_coding	MAP/microtubule affinity regulating kinase 2
chr19	7255451;7256643	7256476;7258363	-	7255451	7258363	cassetteExon	0.5	100	100	ENSMUST00000164205.8	ENSMUSG00000024969.16	Mark2	chr19	protein_coding	MAP/microtubule affinity regulating kinase 2
chr19	7254815;7257377	7257351;7258363	-	7254815;7255451	7255407;7258363	MXE	0.5	100	100	ENSMUST00000164205.8	ENSMUSG00000024969.16	Mark2	chr19	protein_coding	MAP/microtubule affinity regulating kinase 2
chr19	7268147	7318956	-	7268147	7272403	5pMXE	0.25	50	50	ENSMUST00000025921.15	ENSMUSG00000024969.16	Mark2	chr19	protein_coding	MAP/microtubule affinity regulating kinase 2
chr19	7268147	7319132	-	7268147	7272403	5pMXE	0.25	50	50	ENSMUST00000025921.15	ENSMUSG00000024969.16	Mark2	chr19	protein_coding	MAP/microtubule affinity regulating kinase 2
chr19	7254815	7258363	-	7254815;7257377	7257351;7258363	ES	0.25	50	50	ENSMUST00000166461.8	ENSMUSG00000024969.16	Mark2	chr19	protein_coding	MAP/microtubule affinity regulating kinase 2
chr19	7256643	7257351	-	7254815	7257351	A3SS	0.33	50	50	ENSMUST00000166461.8	ENSMUSG00000024969.16	Mark2	chr19	protein_coding	MAP/microtubule affinity regulating kinase 2
chr19	7256643	7258363	-	7257377	7258363	A3SS&ES	0.25	50	50	ENSMUST00000166461.8	ENSMUSG00000024969.16	Mark2	chr19	protein_coding	MAP/microtubule affinity regulating kinase 2
chr19	7254815	7257351	-	7254815	7255407	5pMXE	0.33	50	50	ENSMUST00000171044.2	ENSMUSG00000024969.16	Mark2	chr19	protein_coding	MAP/microtubule affinity regulating kinase 2
chr19	7254815	7258363	-	7254815	7255407	5pMXE	0.33	50	50	ENSMUST00000171044.2	ENSMUSG00000024969.16	Mark2	chr19	protein_coding	MAP/microtubule affinity regulating kinase 2
chr19	7256643	7258363	-	7254815	7258363	A3SS	0.25	50	50	ENSMUST00000168872.8	ENSMUSG00000024969.16	Mark2	chr19	protein_coding	MAP/microtubule affinity regulating kinase 2
chr19	7256643	7258363	-	7256643;7257377	7257351;7258363	ES	0.25	50	50	ENSMUST00000167767.8	ENSMUSG00000024969.16	Mark2	chr19	protein_coding	MAP/microtubule affinity regulating kinase 2
chr19	7255451	7258363	-	7256643	7258363	3pMXE	0.25	50	50	ENSMUST00000163345.2	ENSMUSG00000024969.16	Mark2	chr19	protein_coding	MAP/microtubule affinity regulating kinase 2
chr19	7258620	7260091	-	7258620	7259163	5pMXE	0.5	50	50	ENSMUST00000163345.2	ENSMUSG00000024969.16	Mark2	chr19	protein_coding	MAP/microtubule affinity regulating kinase 2
chr19	7268147	7318956	-	7268147	7319132	A5SS	0.25	50	50	ENSMUST00000171393.8	ENSMUSG00000024969.16	Mark2	chr19	protein_coding	MAP/microtubule affinity regulating kinase 2
chr19	7275207	7281240	+	7275384	7281240	A5SS	0.5	50	50	ENSMUST00000170286.2	ENSMUSG00000091558.2	Gm17227	chr19	lncRNA	predicted gene 17227
chr19	7335308	7351387	-	7351219	7351387	A3SS&ES	0.5	50	50	ENSMUST00000237653.2	ENSMUSG00000024970.6	Spindoc	chr19	protein_coding	spindlin interactor and repressor of chromatin binding
chr19	7335852	7351022	-	7331620	7351022	A3SS	0.5	50	50	ENSMUST00000237653.2	ENSMUSG00000024970.6	Spindoc	chr19	protein_coding	spindlin interactor and repressor of chromatin binding
chr19	7399009	7400008	+	7399009;7399827	7399279;7400008	ES	0.33	50	50	ENSMUST00000159348.3	ENSMUSG00000053080.11	2700081O15Rik	chr19	protein_coding	RIKEN cDNA 2700081O15 gene
chr19	7397926;7399009	7398620;7400008	+	7397926	7400008	cassetteExon	0.5	100	100	ENSMUST00000161907.2	ENSMUSG00000053080.11	2700081O15Rik	chr19	protein_coding	RIKEN cDNA 2700081O15 gene
chr19	7399827	7400008	+	7397926	7400008	A5SS	0.33	50	50	ENSMUST00000161907.2	ENSMUSG00000053080.11	2700081O15Rik	chr19	protein_coding	RIKEN cDNA 2700081O15 gene
chr19	7399009	7399279	+	7399009	7400008	A3SS	0.5	50	50	ENSMUST00000191580.2	ENSMUSG00000053080.11	2700081O15Rik	chr19	protein_coding	RIKEN cDNA 2700081O15 gene
chr19	7397926	7400008	+	7399009	7400008	A5SS&ES	0.33	50	50	ENSMUST00000191580.2	ENSMUSG00000053080.11	2700081O15Rik	chr19	protein_coding	RIKEN cDNA 2700081O15 gene
chr19	7399827	7400008	+	7399009	7400008	A5SS	0.33	50	50	ENSMUST00000191580.2	ENSMUSG00000053080.11	2700081O15Rik	chr19	protein_coding	RIKEN cDNA 2700081O15 gene
chr19	7412503;7445232	7445176;7460304	-	7412503	7460304	cassetteExon	0.5	100	100	ENSMUST00000088169.7	ENSMUSG00000024758.16	Rtn3	chr19	protein_coding	reticulon 3
chr19	7435788	7460304	-	7412503	7460304	A3SS	0.33	50	50	ENSMUST00000088169.7	ENSMUSG00000024758.16	Rtn3	chr19	protein_coding	reticulon 3
chr19	7412503	7433665	-	7412503	7460304	A5SS	0.33	50	50	ENSMUST00000088169.7	ENSMUSG00000024758.16	Rtn3	chr19	protein_coding	reticulon 3
chr19	7412503	7460304	-	7412503;7435788	7433665;7460304	ES	0.33	50	50	ENSMUST00000088171.12	ENSMUSG00000024758.16	Rtn3	chr19	protein_coding	reticulon 3
chr19	7412503;7445232	7445176;7460304	-	7412503;7435788	7433665;7460304	MXE	0.5	100	100	ENSMUST00000088171.12	ENSMUSG00000024758.16	Rtn3	chr19	protein_coding	reticulon 3
chr19	7435788;7445232	7445176;7460304	-	7435788	7460304	cassetteExon	0.5	100	100	ENSMUST00000088171.12	ENSMUSG00000024758.16	Rtn3	chr19	protein_coding	reticulon 3
chr19	7412503	7445176	-	7412503;7435788	7433665;7445176	ES	0.33	50	50	ENSMUST00000065304.13	ENSMUSG00000024758.16	Rtn3	chr19	protein_coding	reticulon 3
chr19	7434825	7445176	-	7435788	7445176	A3SS	0.33	50	50	ENSMUST00000065304.13	ENSMUSG00000024758.16	Rtn3	chr19	protein_coding	reticulon 3
chr19	7434825	7445176	-	7412503	7445176	A3SS	0.33	50	50	ENSMUST00000025667.14	ENSMUSG00000024758.16	Rtn3	chr19	protein_coding	reticulon 3
chr19	7435788	7445176	-	7412503	7445176	A3SS	0.33	50	50	ENSMUST00000025667.14	ENSMUSG00000024758.16	Rtn3	chr19	protein_coding	reticulon 3
chr19	7435788	7460304	-	7445232	7460304	A3SS&ES	0.33	50	50	ENSMUST00000025667.14	ENSMUSG00000024758.16	Rtn3	chr19	protein_coding	reticulon 3
chr19	7412503	7433665	-	7412503	7445176	A5SS	0.33	50	50	ENSMUST00000025667.14	ENSMUSG00000024758.16	Rtn3	chr19	protein_coding	reticulon 3
chr19	7412503	7445176	-	7412503;7434825	7433665;7445176	ES	0.33	50	50	ENSMUST00000235593.2	ENSMUSG00000024758.16	Rtn3	chr19	protein_coding	reticulon 3
chr19	7471726;7472026	7471919;7486713	+	7471726	7486713	cassetteExon	0.5	100	100	ENSMUST00000170373.9	ENSMUSG00000024759.15	Atl3	chr19	protein_coding	atlastin GTPase 3
chr19	7499572;7505682	7505636;7506307	+	7499572	7506307	cassetteExon	0.5	100	100	ENSMUST00000170373.9	ENSMUSG00000024759.15	Atl3	chr19	protein_coding	atlastin GTPase 3
chr19	7495961	7496963	+	7495961	7498152	A3SS	0.5	50	50	ENSMUST00000170373.9	ENSMUSG00000024759.15	Atl3	chr19	protein_coding	atlastin GTPase 3
chr19	7471712	7486713	+	7471726	7486713	A5SS	0.33	50	50	ENSMUST00000170373.9	ENSMUSG00000024759.15	Atl3	chr19	protein_coding	atlastin GTPase 3
chr19	7472026	7486713	+	7471712	7486713	A5SS	0.33	50	50	ENSMUST00000235557.2	ENSMUSG00000024759.15	Atl3	chr19	protein_coding	atlastin GTPase 3
chr19	7471726	7486713	+	7472026	7486713	5pMXE	0.33	50	50	ENSMUST00000235260.2	ENSMUSG00000024759.15	Atl3	chr19	protein_coding	atlastin GTPase 3
chr19	7535167	7535297	+	7534929	7535297	A5SS	0.5	50	50	ENSMUST00000136465.8	ENSMUSG00000060675.14	Plaat3	chr19	protein_coding	phospholipase A and acyltransferase 3
chr19	7578637	7580374	-	7578637;7579446	7579408;7580374	ES	0.5	50	50	ENSMUST00000159983.8	ENSMUSG00000024972.17	Lgals12	chr19	protein_coding	lectin, galactose binding, soluble 12
chr19	7614931	7616779	+	7614931	7616394	3pMXE	0.5	50	50	ENSMUST00000025929.12	ENSMUSG00000024973.18	Plaat5	chr19	protein_coding	phospholipase A and acyltransferase 5
chr19	7767574	7768127	-	7767577	7768127	A3SS	0.5	50	50	ENSMUST00000120522.8	ENSMUSG00000053303.15	Slc22a26	chr19	protein_coding	solute carrier family 22 (organic cation transporter), member 26
chr19	7768295	7768395	-	7768289	7768395	A3SS	0.5	50	50	ENSMUST00000120522.8	ENSMUSG00000053303.15	Slc22a26	chr19	protein_coding	solute carrier family 22 (organic cation transporter), member 26
chr19	7874243;7887470	7887058;7903223	-	7874243	7903223	cassetteExon	0.5	100	100	ENSMUST00000182102.8	ENSMUSG00000067656.14	Slc22a27	chr19	protein_coding	solute carrier family 22, member 27
chr19	8138995	8140013	-	8139069	8140013	A3SS	0.5	50	50	ENSMUST00000113298.9	ENSMUSG00000075044.15	Slc22a29	chr19	protein_coding	solute carrier family 22. member 29
chr19	8138995	8146519	-	8140121	8146519	A3SS&ES	0.5	50	50	ENSMUST00000113298.9	ENSMUSG00000075044.15	Slc22a29	chr19	protein_coding	solute carrier family 22. member 29
chr19	8138995;8140121	8140013;8146519	-	8138995	8146519	cassetteExon	0.5	100	100	ENSMUST00000142517.3	ENSMUSG00000075044.15	Slc22a29	chr19	protein_coding	solute carrier family 22. member 29
chr19	8321777	8321872	-	8315343	8321872	A3SS	0.33	50	50	ENSMUST00000096269.11	ENSMUSG00000052562.16	Slc22a30	chr19	protein_coding	solute carrier family 22, member 30
chr19	8315343	8321872	-	8313185	8321872	A3SS	0.33	50	50	ENSMUST00000064507.12	ENSMUSG00000052562.16	Slc22a30	chr19	protein_coding	solute carrier family 22, member 30
chr19	8321777	8321872	-	8313185	8321872	A3SS	0.33	50	50	ENSMUST00000064507.12	ENSMUSG00000052562.16	Slc22a30	chr19	protein_coding	solute carrier family 22, member 30
chr19	8313185	8314087	-	8313185	8321872	A5SS	0.5	50	50	ENSMUST00000064507.12	ENSMUSG00000052562.16	Slc22a30	chr19	protein_coding	solute carrier family 22, member 30
chr19	8468660	8500633	-	8468660	8469188	5pMXE	0.5	50	50	ENSMUST00000211035.2	ENSMUSG00000110298.2	Gm8189	chr19	transcribed_unprocessed_pseudogene	predicted gene 8189
chr19	8452332;8454755	8454647;8456318	-	8452332	8456318	cassetteExon	0.5	100	100	ENSMUST00000211035.2	ENSMUSG00000110298.2	Gm8189	chr19	transcribed_unprocessed_pseudogene	predicted gene 8189
chr19	8452332	8456318	-	8454755	8456318	3pMXE	0.5	50	50	ENSMUST00000211159.2	ENSMUSG00000110298.2	Gm8189	chr19	transcribed_unprocessed_pseudogene	predicted gene 8189
chr19	8568820	8571247	+	8568820	8570146	3pMXE	0.33	50	50	ENSMUST00000237904.2	ENSMUSG00000063796.10	Slc22a8	chr19	protein_coding	solute carrier family 22 (organic anion transporter), member 8
chr19	8568820	8570577	+	8568820	8570146	A3SS	0.33	50	50	ENSMUST00000237904.2	ENSMUSG00000063796.10	Slc22a8	chr19	protein_coding	solute carrier family 22 (organic anion transporter), member 8
chr19	8568820;8570656	8570577;8571247	+	8568820	8571247	cassetteExon	0.5	100	100	ENSMUST00000170817.2	ENSMUSG00000063796.10	Slc22a8	chr19	protein_coding	solute carrier family 22 (organic anion transporter), member 8
chr19	8641821	8655226	+	8641821;8642364	8642273;8655226	ES	0.5	50	50	ENSMUST00000177197.8	ENSMUSG00000032773.10	Chrm1	chr19	protein_coding	cholinergic receptor, muscarinic 1, CNS
chr19	8687147	8690094	-	8687147;8689292	8689198;8690094	ES	0.5	50	50	ENSMUST00000170157.8	ENSMUSG00000010095.14	Slc3a2	chr19	protein_coding	solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
chr19	8689292	8690230	-	8689292	8690094	A5SS	0.5	50	50	ENSMUST00000170157.8	ENSMUSG00000010095.14	Slc3a2	chr19	protein_coding	solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
chr19	8691116	8691325	-	8691116	8700348	A5SS	0.25	50	50	ENSMUST00000170157.8	ENSMUSG00000010095.14	Slc3a2	chr19	protein_coding	solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
chr19	8691116	8691479	-	8691116	8700348	A5SS	0.25	50	50	ENSMUST00000170157.8	ENSMUSG00000010095.14	Slc3a2	chr19	protein_coding	solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
chr19	8691116	8691682	-	8691116	8700348	A5SS	0.25	50	50	ENSMUST00000170157.8	ENSMUSG00000010095.14	Slc3a2	chr19	protein_coding	solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
chr19	8687147	8690094	-	8687147	8689198	A5SS&ES	0.5	50	50	ENSMUST00000205377.2	ENSMUSG00000010095.14	Slc3a2	chr19	protein_coding	solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
chr19	8691116	8691325	-	8691116	8691682	A5SS	0.25	50	50	ENSMUST00000206797.2	ENSMUSG00000010095.14	Slc3a2	chr19	protein_coding	solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
chr19	8691116	8691479	-	8691116	8691682	A5SS	0.25	50	50	ENSMUST00000206797.2	ENSMUSG00000010095.14	Slc3a2	chr19	protein_coding	solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
chr19	8691116	8691479	-	8691116	8691325	5pMXE	0.25	50	50	ENSMUST00000206560.2	ENSMUSG00000010095.14	Slc3a2	chr19	protein_coding	solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
chr19	8701553	8701741	+	8701553	8701767	A3SS	0.5	50	50	ENSMUST00000206155.2	ENSMUSG00000108414.2	Snhg1	chr19	lncRNA	small nucleolar RNA host gene 1
chr19	8703288	8703431	+	8703190	8703431	A5SS	0.5	50	50	ENSMUST00000206155.2	ENSMUSG00000108414.2	Snhg1	chr19	lncRNA	small nucleolar RNA host gene 1
chr19	8713269	8713540	+	8713269;8713457	8713351;8713540	ES	0.5	50	50	ENSMUST00000210512.2	ENSMUSG00000042729.12	Wdr74	chr19	protein_coding	WD repeat domain 74
chr19	8715358	8715517	+	8715226	8715517	A5SS	0.5	50	50	ENSMUST00000210512.2	ENSMUSG00000042729.12	Wdr74	chr19	protein_coding	WD repeat domain 74
chr19	8713269	8713540	+	8713269	8713351	A3SS	0.5	50	50	ENSMUST00000210592.3	ENSMUSG00000042729.12	Wdr74	chr19	protein_coding	WD repeat domain 74
chr19	8716866;8717516	8717183;8717766	+	8716866	8717766	cassetteExon	0.5	100	100	ENSMUST00000237531.2	ENSMUSG00000042729.12	Wdr74	chr19	protein_coding	WD repeat domain 74
chr19	8718939;8720288	8720218;8720444	+	8718939;8719861	8719618;8720444	MXE	0.5	100	100	ENSMUST00000177322.8	ENSMUSG00000010110.18	Stx5a	chr19	protein_coding	syntaxin 5A
chr19	8719861;8720288	8720218;8720444	+	8719861	8720444	cassetteExon	0.5	100	100	ENSMUST00000177322.8	ENSMUSG00000010110.18	Stx5a	chr19	protein_coding	syntaxin 5A
chr19	8727391	8732241	+	8727391	8732273	A3SS	0.5	50	50	ENSMUST00000177322.8	ENSMUSG00000010110.18	Stx5a	chr19	protein_coding	syntaxin 5A
chr19	8719159	8719618	+	8718939	8719618	A5SS	0.33	50	50	ENSMUST00000177322.8	ENSMUSG00000010110.18	Stx5a	chr19	protein_coding	syntaxin 5A
chr19	8719518	8719618	+	8718939	8719618	A5SS	0.33	50	50	ENSMUST00000177322.8	ENSMUSG00000010110.18	Stx5a	chr19	protein_coding	syntaxin 5A
chr19	8720866	8725825	+	8720787	8725825	A5SS	0.5	50	50	ENSMUST00000177322.8	ENSMUSG00000010110.18	Stx5a	chr19	protein_coding	syntaxin 5A
chr19	8726263	8727030	+	8726252	8727030	A5SS	0.5	50	50	ENSMUST00000177322.8	ENSMUSG00000010110.18	Stx5a	chr19	protein_coding	syntaxin 5A
chr19	8718939	8720218	+	8718939;8719861	8719618;8720218	ES	0.5	50	50	ENSMUST00000176381.8	ENSMUSG00000010110.18	Stx5a	chr19	protein_coding	syntaxin 5A
chr19	8718939	8720218	+	8718939	8719618	3pMXE	0.5	50	50	ENSMUST00000175642.2	ENSMUSG00000010110.18	Stx5a	chr19	protein_coding	syntaxin 5A
chr19	8719861	8720444	+	8719861	8720218	3pMXE	0.5	50	50	ENSMUST00000176314.8	ENSMUSG00000010110.18	Stx5a	chr19	protein_coding	syntaxin 5A
chr19	8719518	8719618	+	8719159	8719618	A5SS	0.33	50	50	ENSMUST00000176314.8	ENSMUSG00000010110.18	Stx5a	chr19	protein_coding	syntaxin 5A
chr19	8718939	8720218	+	8719861	8720218	5pMXE	0.5	50	50	ENSMUST00000073430.14	ENSMUSG00000010110.18	Stx5a	chr19	protein_coding	syntaxin 5A
chr19	8719861	8720444	+	8720288	8720444	5pMXE	0.5	50	50	ENSMUST00000176009.2	ENSMUSG00000010110.18	Stx5a	chr19	protein_coding	syntaxin 5A
chr19	8741713	8742286	+	8741713;8741970	8741863;8742286	ES	0.5	50	50	ENSMUST00000010241.14	ENSMUSG00000010097.16	Nxf1	chr19	protein_coding	nuclear RNA export factor 1
chr19	8742395	8744444	+	8742395;8744197	8744161;8744444	ES	0.5	50	50	ENSMUST00000010241.14	ENSMUSG00000010097.16	Nxf1	chr19	protein_coding	nuclear RNA export factor 1
chr19	8744647	8744937	+	8744647;8744838	8744731;8744937	ES	0.5	50	50	ENSMUST00000010241.14	ENSMUSG00000010097.16	Nxf1	chr19	protein_coding	nuclear RNA export factor 1
chr19	8746025	8746407	+	8746025	8746365	A3SS	0.5	50	50	ENSMUST00000010241.14	ENSMUSG00000010097.16	Nxf1	chr19	protein_coding	nuclear RNA export factor 1
chr19	8739851	8740047	+	8739859	8740047	A5SS	0.5	50	50	ENSMUST00000010241.14	ENSMUSG00000010097.16	Nxf1	chr19	protein_coding	nuclear RNA export factor 1
chr19	8747477	8747624	+	8746547	8747624	A5SS	0.5	50	50	ENSMUST00000010241.14	ENSMUSG00000010097.16	Nxf1	chr19	protein_coding	nuclear RNA export factor 1
chr19	8742395	8744444	+	8744197	8744444	A5SS	0.5	50	50	ENSMUST00000184970.9	ENSMUSG00000010097.16	Nxf1	chr19	protein_coding	nuclear RNA export factor 1
chr19	8740980;8741513	8741061;8741625	+	8740980	8741625	cassetteExon	0.5	100	100	ENSMUST00000183780.8	ENSMUSG00000010097.16	Nxf1	chr19	protein_coding	nuclear RNA export factor 1
chr19	8734623	8739676	+	8734623	8740897	A3SS	0.5	50	50	ENSMUST00000183780.8	ENSMUSG00000010097.16	Nxf1	chr19	protein_coding	nuclear RNA export factor 1
chr19	8740200	8740897	+	8734623	8740897	A5SS	0.5	50	50	ENSMUST00000183780.8	ENSMUSG00000010097.16	Nxf1	chr19	protein_coding	nuclear RNA export factor 1
chr19	8740980	8741625	+	8740980	8741061	3pMXE	0.5	50	50	ENSMUST00000184756.2	ENSMUSG00000010097.16	Nxf1	chr19	protein_coding	nuclear RNA export factor 1
chr19	8751056	8751699	-	8750986	8751699	A3SS	0.33	50	50	ENSMUST00000237634.2	ENSMUSG00000118346.2	Tmem179b	chr19	protein_coding	transmembrane protein 179B
chr19	8750470;8750986	8750654;8751699	-	8750470	8751699	cassetteExon	0.5	100	100	ENSMUST00000235756.2	ENSMUSG00000118346.2	Tmem179b	chr19	protein_coding	transmembrane protein 179B
chr19	8750470;8751056	8750654;8751699	-	8750470	8751699	cassetteExon	0.5	100	100	ENSMUST00000235756.2	ENSMUSG00000118346.2	Tmem179b	chr19	protein_coding	transmembrane protein 179B
chr19	8756097	8759365	-	8756097;8756289	8756215;8759365	ES	0.5	50	50	ENSMUST00000177216.8	ENSMUSG00000003680.17	Taf6l	chr19	protein_coding	TATA-box binding protein associated factor 6 like
chr19	8759459	8759667	-	8759459	8759720	A5SS	0.5	50	50	ENSMUST00000177216.8	ENSMUSG00000003680.17	Taf6l	chr19	protein_coding	TATA-box binding protein associated factor 6 like
chr19	8761358	8763574	-	8761358	8762486	A5SS&ES	0.5	50	50	ENSMUST00000177216.8	ENSMUSG00000003680.17	Taf6l	chr19	protein_coding	TATA-box binding protein associated factor 6 like
chr19	8761358	8763574	-	8761358;8762542	8762486;8763574	ES	0.5	50	50	ENSMUST00000176610.9	ENSMUSG00000003680.17	Taf6l	chr19	protein_coding	TATA-box binding protein associated factor 6 like
chr19	8762542	8762997	-	8762542	8763574	A5SS	0.5	50	50	ENSMUST00000176610.9	ENSMUSG00000003680.17	Taf6l	chr19	protein_coding	TATA-box binding protein associated factor 6 like
chr19	8756097	8759365	-	8756097	8756215	5pMXE	0.5	50	50	ENSMUST00000176747.2	ENSMUSG00000003680.17	Taf6l	chr19	protein_coding	TATA-box binding protein associated factor 6 like
chr19	8771894	8775588	-	8771894;8774759	8774600;8775588	ES	0.33	50	50	ENSMUST00000096261.5	ENSMUSG00000071662.5	Polr2g	chr19	protein_coding	polymerase (RNA) II (DNA directed) polypeptide G
chr19	8775503	8775588	-	8774759	8775588	A3SS	0.33	50	50	ENSMUST00000096261.5	ENSMUSG00000071662.5	Polr2g	chr19	protein_coding	polymerase (RNA) II (DNA directed) polypeptide G
chr19	8775503	8775588	-	8771894	8775588	A3SS	0.33	50	50	ENSMUST00000237207.2	ENSMUSG00000071662.5	Polr2g	chr19	protein_coding	polymerase (RNA) II (DNA directed) polypeptide G
chr19	8789202	8795800	-	8789202;8793400	8793218;8795800	ES	0.5	50	50	ENSMUST00000096751.11	ENSMUSG00000071660.11	Ttc9c	chr19	protein_coding	tetratricopeptide repeat domain 9C
chr19	8808696	8816940	+	8808696	8808819	3pMXE	0.5	50	50	ENSMUST00000096753.5	ENSMUSG00000071659.5	Hnrnpul2	chr19	protein_coding	heterogeneous nuclear ribonucleoprotein U-like 2
chr19	8815228	8816940	+	8808696	8816940	A5SS	0.5	50	50	ENSMUST00000237654.2	ENSMUSG00000118124.2	Gm50139	chr19	protein_coding	predicted gene, 50139
chr19	8817932	8818472	+	8817148	8818472	A5SS	0.5	50	50	ENSMUST00000237654.2	ENSMUSG00000118124.2	Gm50139	chr19	protein_coding	predicted gene, 50139
chr19	8824911	8825278	+	8824911;8825097	8825031;8825278	ES	0.5	50	50	ENSMUST00000171649.8	ENSMUSG00000071657.13	Bscl2	chr19	protein_coding	Berardinelli-Seip congenital lipodystrophy 2 (seipin)
chr19	8822678	8823613	+	8822678	8823554	A3SS	0.5	50	50	ENSMUST00000171649.8	ENSMUSG00000071657.13	Bscl2	chr19	protein_coding	Berardinelli-Seip congenital lipodystrophy 2 (seipin)
chr19	8824911	8825278	+	8824911	8825031	A3SS	0.5	50	50	ENSMUST00000159571.8	ENSMUSG00000071657.13	Bscl2	chr19	protein_coding	Berardinelli-Seip congenital lipodystrophy 2 (seipin)
chr19	8828476	8829019	+	8828395	8829019	A5SS	0.5	50	50	ENSMUST00000235683.2	ENSMUSG00000071656.8	Lrrn4cl	chr19	protein_coding	LRRN4 C-terminal like
chr19	8867464	8872123	+	8867464	8867775	3pMXE	0.5	50	50	ENSMUST00000187504.7	ENSMUSG00000096740.9	Lbhd1	chr19	protein_coding	LBH domain containing 1
chr19	8866612;8867091	8867001;8867367	+	8866612	8867367	cassetteExon	0.5	100	100	ENSMUST00000187504.7	ENSMUSG00000096740.9	Lbhd1	chr19	protein_coding	LBH domain containing 1
chr19	8866328	8866488	+	8864614	8866488	A5SS	0.5	50	50	ENSMUST00000187504.7	ENSMUSG00000096740.9	Lbhd1	chr19	protein_coding	LBH domain containing 1
chr19	8866682	8867367	+	8866612	8867367	A5SS	0.33	50	50	ENSMUST00000187504.7	ENSMUSG00000096740.9	Lbhd1	chr19	protein_coding	LBH domain containing 1
chr19	8867091	8867367	+	8866682	8867367	A5SS	0.33	50	50	ENSMUST00000190530.2	ENSMUSG00000096740.9	Lbhd1	chr19	protein_coding	LBH domain containing 1
chr19	8866612	8867367	+	8867091	8867367	A5SS	0.33	50	50	ENSMUST00000187037.7	ENSMUSG00000071653.10	1810009A15Rik	chr19	protein_coding	RIKEN cDNA 1810009A15 gene
chr19	8867464;8868225	8867775;8872123	+	8867464	8872123	cassetteExon	0.5	100	100	ENSMUST00000191089.2	ENSMUSG00000116347.2	Gm49416	chr19	protein_coding	predicted gene, 49416
chr19	8870512	8872123	+	8867464	8872123	A5SS	0.33	50	50	ENSMUST00000191089.2	ENSMUSG00000116347.2	Gm49416	chr19	protein_coding	predicted gene, 49416
chr19	8867464	8872123	+	8868225	8872123	5pMXE	0.33	50	50	ENSMUST00000188635.2	ENSMUSG00000116347.2	Gm49416	chr19	protein_coding	predicted gene, 49416
chr19	8870512	8872123	+	8868225	8872123	A5SS	0.33	50	50	ENSMUST00000188635.2	ENSMUSG00000116347.2	Gm49416	chr19	protein_coding	predicted gene, 49416
chr19	8875523	8879628	+	8875523;8876758	8876560;8879628	ES	0.5	50	50	ENSMUST00000236563.2	ENSMUSG00000071650.7	Ganab	chr19	protein_coding	alpha glucosidase 2 alpha neutral subunit
chr19	8879994;8880708	8880600;8882299	+	8879994	8882299	cassetteExon	0.5	100	100	ENSMUST00000236563.2	ENSMUSG00000071650.7	Ganab	chr19	protein_coding	alpha glucosidase 2 alpha neutral subunit
chr19	8884758	8886042	+	8884758;8885280	8885215;8886042	ES	0.5	50	50	ENSMUST00000096246.5	ENSMUSG00000071650.7	Ganab	chr19	protein_coding	alpha glucosidase 2 alpha neutral subunit
chr19	8899344	8903068	+	8899344	8902902	A3SS	0.5	50	50	ENSMUST00000096243.7	ENSMUSG00000071649.7	B3gat3	chr19	protein_coding	beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)
chr19	8911716	8913668	+	8911716;8912410	8912315;8913668	ES	0.5	50	50	ENSMUST00000096241.6	ENSMUSG00000071647.6	Eml3	chr19	protein_coding	echinoderm microtubule associated protein like 3
chr19	8908334	8908411	+	8908334	8908408	A3SS	0.5	50	50	ENSMUST00000096241.6	ENSMUSG00000071647.6	Eml3	chr19	protein_coding	echinoderm microtubule associated protein like 3
chr19	8920083	8920829	+	8919746	8920829	A5SS	0.33	50	50	ENSMUST00000096240.3	ENSMUSG00000071646.10	Mta2	chr19	protein_coding	metastasis-associated gene family, member 2
chr19	8920396	8920829	+	8919746	8920829	A5SS	0.33	50	50	ENSMUST00000096240.3	ENSMUSG00000071646.10	Mta2	chr19	protein_coding	metastasis-associated gene family, member 2
chr19	8922714	8923120	+	8921470	8923120	A5SS	0.5	50	50	ENSMUST00000096240.3	ENSMUSG00000071646.10	Mta2	chr19	protein_coding	metastasis-associated gene family, member 2
chr19	8920083	8920829	+	8920083;8920396	8920284;8920829	ES	0.5	50	50	ENSMUST00000137956.8	ENSMUSG00000071646.10	Mta2	chr19	protein_coding	metastasis-associated gene family, member 2
chr19	8947351;8948111	8947949;8949871	+	8947351	8949871	cassetteExon	0.5	100	100	ENSMUST00000052248.8	ENSMUSG00000071644.11	Eef1g	chr19	protein_coding	eukaryotic translation elongation factor 1 gamma
chr19	8945051	8945580	+	8944589	8945580	A5SS	0.5	50	50	ENSMUST00000052248.8	ENSMUSG00000071644.11	Eef1g	chr19	protein_coding	eukaryotic translation elongation factor 1 gamma
chr19	8978227	9014523	+	8978227	8979063	3pMXE	0.5	50	50	ENSMUST00000092956.4	ENSMUSG00000069833.14	Ahnak	chr19	protein_coding	AHNAK nucleoprotein (desmoyokin)
chr19	8976417	8977026	+	8966793	8977026	A5SS	0.5	50	50	ENSMUST00000092956.4	ENSMUSG00000069833.14	Ahnak	chr19	protein_coding	AHNAK nucleoprotein (desmoyokin)
chr19	9014622	9053940	+	9014622;9044965	9044817;9053940	ES	0.33	50	50	ENSMUST00000237912.2	ENSMUSG00000069833.14	Ahnak	chr19	protein_coding	AHNAK nucleoprotein (desmoyokin)
chr19	9014622;9023080	9022989;9053940	+	9014622;9044965	9044817;9053940	MXE	0.5	100	100	ENSMUST00000237912.2	ENSMUSG00000069833.14	Ahnak	chr19	protein_coding	AHNAK nucleoprotein (desmoyokin)
chr19	9014622;9023080	9022989;9053940	+	9014622	9053940	cassetteExon	0.5	100	100	ENSMUST00000092955.11	ENSMUSG00000069833.14	Ahnak	chr19	protein_coding	AHNAK nucleoprotein (desmoyokin)
chr19	9855792;9860567	9860556;9861063	-	9855792	9861063	cassetteExon	0.5	100	100	ENSMUST00000025562.9	ENSMUSG00000024660.10	Incenp	chr19	protein_coding	inner centromere protein
chr19	9872835;9873005	9872939;9876703	-	9872835	9876703	cassetteExon	0.5	100	100	ENSMUST00000025562.9	ENSMUSG00000024660.10	Incenp	chr19	protein_coding	inner centromere protein
chr19	9872831	9876703	-	9872835	9876703	A3SS	0.33	50	50	ENSMUST00000025562.9	ENSMUSG00000024660.10	Incenp	chr19	protein_coding	inner centromere protein
chr19	9850237	9852243	-	9850237	9851584	A5SS&ES	0.5	50	50	ENSMUST00000025562.9	ENSMUSG00000024660.10	Incenp	chr19	protein_coding	inner centromere protein
chr19	9872831	9876703	-	9873005	9876703	A3SS&ES	0.33	50	50	ENSMUST00000237725.2	ENSMUSG00000024660.10	Incenp	chr19	protein_coding	inner centromere protein
chr19	9877384	9879881	+	9877384;9878441	9878232;9879881	ES	0.5	50	50	ENSMUST00000235986.2	ENSMUSG00000118100.2	Gm50340	chr19	lncRNA	predicted gene, 50340
chr19	9877384	9879881	+	9877384	9878232	3pMXE	0.5	50	50	ENSMUST00000235252.2	ENSMUSG00000118100.2	Gm50340	chr19	lncRNA	predicted gene, 50340
chr19	9960347	9961617	+	9960347	9961545	A3SS	0.5	50	50	ENSMUST00000235196.2	ENSMUSG00000024661.8	Fth1	chr19	protein_coding	ferritin heavy polypeptide 1
chr19	9960538	9961545	+	9960347	9961545	A5SS	0.5	50	50	ENSMUST00000235196.2	ENSMUSG00000024661.8	Fth1	chr19	protein_coding	ferritin heavy polypeptide 1
chr19	9967990	9970058	-	9967990	9969001	A5SS&ES	0.5	50	50	ENSMUST00000117346.2	ENSMUSG00000037418.7	Best1	chr19	protein_coding	bestrophin 1
chr19	9974578	9975508	-	9974578	9978822	A5SS	0.5	50	50	ENSMUST00000117346.2	ENSMUSG00000037418.7	Best1	chr19	protein_coding	bestrophin 1
chr19	10005001	10007514	+	10005001;10005867	10005649;10007514	ES	0.33	50	50	ENSMUST00000121418.8	ENSMUSG00000024663.21	Rab3il1	chr19	protein_coding	RAB3A interacting protein (rabin3)-like 1
chr19	9992649;10003804	10003744;10003894	+	9992649	10003894	cassetteExon	0.5	100	100	ENSMUST00000121418.8	ENSMUSG00000024663.21	Rab3il1	chr19	protein_coding	RAB3A interacting protein (rabin3)-like 1
chr19	10005867;10006984	10006838;10007514	+	10005867	10007514	cassetteExon	0.5	100	100	ENSMUST00000121418.8	ENSMUSG00000024663.21	Rab3il1	chr19	protein_coding	RAB3A interacting protein (rabin3)-like 1
chr19	9995723	10003894	+	9992649	10003894	A5SS	0.33	50	50	ENSMUST00000121418.8	ENSMUSG00000024663.21	Rab3il1	chr19	protein_coding	RAB3A interacting protein (rabin3)-like 1
chr19	9995723	10003894	+	10003804	10003894	A5SS&ES	0.33	50	50	ENSMUST00000137637.8	ENSMUSG00000024663.21	Rab3il1	chr19	protein_coding	RAB3A interacting protein (rabin3)-like 1
chr19	9995941	10003744	+	9992649	10003744	A5SS	0.5	50	50	ENSMUST00000137637.8	ENSMUSG00000024663.21	Rab3il1	chr19	protein_coding	RAB3A interacting protein (rabin3)-like 1
chr19	9995723	9995846	+	9995723	10003894	A3SS	0.5	50	50	ENSMUST00000113161.10	ENSMUSG00000024663.21	Rab3il1	chr19	protein_coding	RAB3A interacting protein (rabin3)-like 1
chr19	10006984	10007514	+	10005001	10007514	A5SS	0.33	50	50	ENSMUST00000117641.8	ENSMUSG00000024663.21	Rab3il1	chr19	protein_coding	RAB3A interacting protein (rabin3)-like 1
chr19	10005001	10007514	+	10005001	10005649	3pMXE	0.5	50	50	ENSMUST00000131407.2	ENSMUSG00000024663.21	Rab3il1	chr19	protein_coding	RAB3A interacting protein (rabin3)-like 1
chr19	10029676	10031384	+	10029676;10030397	10030200;10031384	ES	0.5	50	50	ENSMUST00000115995.4	ENSMUSG00000024664.6	Fads3	chr19	protein_coding	fatty acid desaturase 3
chr19	10032547	10033355	+	10032547;10033058	10032961;10033355	ES	0.5	50	50	ENSMUST00000115995.4	ENSMUSG00000024664.6	Fads3	chr19	protein_coding	fatty acid desaturase 3
chr19	10029676	10031384	+	10030397	10031384	5pMXE	0.5	50	50	ENSMUST00000235185.2	ENSMUSG00000024664.6	Fads3	chr19	protein_coding	fatty acid desaturase 3
chr19	10047988;10052516	10052481;10059929	-	10047988	10059929	cassetteExon	0.5	100	100	ENSMUST00000025567.9	ENSMUSG00000024665.9	Fads2	chr19	protein_coding	fatty acid desaturase 2
chr19	10047988	10048443	-	10047988	10059929	A5SS	0.33	50	50	ENSMUST00000025567.9	ENSMUSG00000024665.9	Fads2	chr19	protein_coding	fatty acid desaturase 2
chr19	10047988	10052481	-	10047988	10048443	5pMXE	0.33	50	50	ENSMUST00000238023.2	ENSMUSG00000024665.9	Fads2	chr19	protein_coding	fatty acid desaturase 2
chr19	10160628	10163049	+	10160628;10162401	10162291;10163049	ES	0.5	50	50	ENSMUST00000010807.6	ENSMUSG00000010663.6	Fads1	chr19	protein_coding	fatty acid desaturase 1
chr19	10162401	10162942	+	10162401	10163049	A3SS	0.5	50	50	ENSMUST00000010807.6	ENSMUSG00000010663.6	Fads1	chr19	protein_coding	fatty acid desaturase 1
chr19	10171761	10172551	+	10171761	10171853	A3SS&ES	0.5	50	50	ENSMUST00000010807.6	ENSMUSG00000010663.6	Fads1	chr19	protein_coding	fatty acid desaturase 1
chr19	10161073	10162291	+	10160628	10162291	A5SS	0.5	50	50	ENSMUST00000010807.6	ENSMUSG00000010663.6	Fads1	chr19	protein_coding	fatty acid desaturase 1
chr19	10170793	10171065	+	10170352	10171065	A5SS	0.5	50	50	ENSMUST00000010807.6	ENSMUSG00000010663.6	Fads1	chr19	protein_coding	fatty acid desaturase 1
chr19	10160628	10163049	+	10160628	10162291	A3SS&ES	0.5	50	50	ENSMUST00000235515.2	ENSMUSG00000010663.6	Fads1	chr19	protein_coding	fatty acid desaturase 1
chr19	10178461	10181063	-	10178461	10181052	A5SS	0.33	50	50	ENSMUST00000156291.2	ENSMUSG00000024742.16	Fen1	chr19	protein_coding	flap structure specific endonuclease 1
chr19	10178461	10181168	-	10178461	10181052	A5SS	0.33	50	50	ENSMUST00000156291.2	ENSMUSG00000024742.16	Fen1	chr19	protein_coding	flap structure specific endonuclease 1
chr19	10178461	10181063	-	10178461	10181168	A5SS	0.33	50	50	ENSMUST00000116542.9	ENSMUSG00000024742.16	Fen1	chr19	protein_coding	flap structure specific endonuclease 1
chr19	10181628;10183488	10183114;10183788	+	10181628	10183788	cassetteExon	0.5	100	100	ENSMUST00000040372.14	ENSMUSG00000036372.15	Tmem258	chr19	protein_coding	transmembrane protein 258
chr19	10181628	10183788	+	10183488	10183788	5pMXE	0.5	50	50	ENSMUST00000166412.2	ENSMUSG00000036372.15	Tmem258	chr19	protein_coding	transmembrane protein 258
chr19	10192466	10193106	-	10192466;10192718	10192638;10193106	ES	0.33	50	50	ENSMUST00000088013.12	ENSMUSG00000036098.16	Myrf	chr19	protein_coding	myelin regulatory factor
chr19	10192469	10192638	-	10192466	10192638	A3SS	0.5	50	50	ENSMUST00000088013.12	ENSMUSG00000036098.16	Myrf	chr19	protein_coding	myelin regulatory factor
chr19	10192469	10193106	-	10192718	10193106	A3SS&ES	0.33	50	50	ENSMUST00000088013.12	ENSMUSG00000036098.16	Myrf	chr19	protein_coding	myelin regulatory factor
chr19	10192469;10192718	10192638;10193106	-	10192469	10193106	cassetteExon	0.5	100	100	ENSMUST00000190922.7	ENSMUSG00000036098.16	Myrf	chr19	protein_coding	myelin regulatory factor
chr19	10192466	10193106	-	10192469	10193106	A3SS	0.33	50	50	ENSMUST00000190922.7	ENSMUSG00000036098.16	Myrf	chr19	protein_coding	myelin regulatory factor
chr19	10192466	10193106	-	10192718	10193106	A3SS&ES	0.33	50	50	ENSMUST00000186056.7	ENSMUSG00000036098.16	Myrf	chr19	protein_coding	myelin regulatory factor
chr19	10206280	10206384	-	10200931	10206384	A3SS	0.5	50	50	ENSMUST00000186056.7	ENSMUSG00000036098.16	Myrf	chr19	protein_coding	myelin regulatory factor
chr19	10200931	10201736	-	10200931	10206384	A5SS	0.5	50	50	ENSMUST00000186056.7	ENSMUSG00000036098.16	Myrf	chr19	protein_coding	myelin regulatory factor
chr19	10232426	10233025	-	10232313	10233025	A3SS	0.5	50	50	ENSMUST00000039327.11	ENSMUSG00000035735.11	Dagla	chr19	protein_coding	diacylglycerol lipase, alpha
chr19	10247182	10248375	-	10247182	10248352	A5SS	0.5	50	50	ENSMUST00000039327.11	ENSMUSG00000035735.11	Dagla	chr19	protein_coding	diacylglycerol lipase, alpha
chr19	10366877	10395327	+	10366877;10390807	10390704;10395327	ES	0.5	50	50	ENSMUST00000073899.6	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10395406;10399252	10399121;10412914	+	10395406	10412914	cassetteExon	0.5	100	100	ENSMUST00000073899.6	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10395406;10400376	10400149;10412914	+	10395406	10412914	cassetteExon	0.5	100	100	ENSMUST00000073899.6	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10395406	10403663	+	10395406	10412914	A3SS	0.25	50	50	ENSMUST00000073899.6	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10381472	10390704	+	10366877	10390704	A5SS	0.5	50	50	ENSMUST00000073899.6	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10407824	10412914	+	10395406	10412914	A5SS	0.25	50	50	ENSMUST00000073899.6	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10395406;10400376	10400149;10412914	+	10395406;10399252	10399121;10412914	MXE	0.5	100	100	ENSMUST00000225861.2	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10399252;10400376	10400149;10412914	+	10399252	10412914	cassetteExon	0.5	100	100	ENSMUST00000225861.2	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10395406	10403663	+	10395406	10399121	A3SS&ES	0.25	50	50	ENSMUST00000225861.2	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10399252	10399759	+	10399252	10412914	A3SS	0.25	50	50	ENSMUST00000225861.2	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10399252	10403663	+	10399252	10412914	A3SS	0.25	50	50	ENSMUST00000225861.2	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10407824	10412914	+	10399252	10412914	A5SS	0.25	50	50	ENSMUST00000225861.2	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10395406	10400149	+	10395406	10399121	3pMXE	0.25	50	50	ENSMUST00000225019.2	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10395406	10412914	+	10395406	10399121	3pMXE	0.25	50	50	ENSMUST00000225019.2	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10395406	10400149	+	10395406;10399252	10399121;10400149	ES	0.33	50	50	ENSMUST00000169121.9	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10399252	10403663	+	10399252;10400376	10400149;10403663	ES	0.25	50	50	ENSMUST00000169121.9	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10400376	10407702	+	10400376;10404031	10403663;10407702	ES	0.5	50	50	ENSMUST00000169121.9	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10399252;10399881	10399759;10400149	+	10399252	10400149	cassetteExon	0.5	100	100	ENSMUST00000169121.9	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10399252;10399881	10399759;10403663	+	10399252;10400376	10400149;10403663	MXE	0.5	100	100	ENSMUST00000169121.9	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10395406	10403663	+	10395406;10399252	10399121;10403663	ES	0.25	50	50	ENSMUST00000076968.11	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10395406;10400376	10400149;10403663	+	10395406;10399252	10399121;10403663	MXE	0.5	100	100	ENSMUST00000076968.11	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10395406;10400376	10400149;10407702	+	10395406;10404031	10399121;10407702	MXE	0.5	100	100	ENSMUST00000076968.11	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10395406;10400376	10400149;10412914	+	10395406;10407824	10399121;10412914	MXE	0.5	100	100	ENSMUST00000076968.11	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10399252;10399881	10399759;10403663	+	10399252	10403663	cassetteExon	0.5	100	100	ENSMUST00000076968.11	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10399252;10400376	10400149;10407702	+	10399252;10404031	10403663;10407702	MXE	0.5	100	100	ENSMUST00000076968.11	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10399252;10400376	10400149;10412914	+	10399252;10407824	10403663;10412914	MXE	0.5	100	100	ENSMUST00000076968.11	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10400376;10407824	10407702;10412914	+	10400376	10412914	cassetteExon	0.5	100	100	ENSMUST00000235479.2	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10395406	10403663	+	10395406	10400149	A3SS&ES	0.25	50	50	ENSMUST00000235479.2	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10400376	10403663	+	10400376	10412914	A3SS	0.33	50	50	ENSMUST00000235479.2	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10399881	10400149	+	10395406	10400149	A5SS	0.33	50	50	ENSMUST00000235479.2	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10395406	10403663	+	10395406;10400376	10400149;10403663	ES	0.25	50	50	ENSMUST00000235784.2	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10395406;10399252	10399121;10412914	+	10395406;10407824	10400149;10412914	MXE	0.5	100	100	ENSMUST00000235784.2	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10399881	10403663	+	10400376	10403663	A5SS&ES	0.25	50	50	ENSMUST00000235784.2	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10395406;10399252	10399121;10412914	+	10395406;10407824	10403663;10412914	MXE	0.5	100	100	ENSMUST00000224135.3	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10395406;10400376	10400149;10407702	+	10395406;10404031	10403663;10407702	MXE	0.5	100	100	ENSMUST00000224135.3	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10395406;10400376	10400149;10412914	+	10395406;10407824	10403663;10412914	MXE	0.5	100	100	ENSMUST00000224135.3	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10399881	10403663	+	10395406	10403663	A5SS	0.25	50	50	ENSMUST00000224135.3	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10395406;10400376	10400149;10403663	+	10395406;10399881	10399121;10403663	MXE	0.5	100	100	ENSMUST00000237745.2	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10399252;10400376	10400149;10407702	+	10399252;10404031	10399759;10407702	MXE	0.5	100	100	ENSMUST00000237745.2	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10399252;10400376	10400149;10412914	+	10399252;10407824	10399759;10412914	MXE	0.5	100	100	ENSMUST00000237745.2	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10399881;10400376	10400149;10403663	+	10399881	10403663	cassetteExon	0.5	100	100	ENSMUST00000237745.2	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10399881;10400376	10400149;10407702	+	10399881;10404031	10403663;10407702	MXE	0.5	100	100	ENSMUST00000237745.2	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10399881;10400376	10400149;10412914	+	10399881;10407824	10403663;10412914	MXE	0.5	100	100	ENSMUST00000237745.2	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10399252	10403663	+	10399252	10400149	A3SS&ES	0.25	50	50	ENSMUST00000225452.3	ENSMUSG00000024743.17	Syt7	chr19	protein_coding	synaptotagmin VII
chr19	10459184	10460192	-	10459184;10459732	10459597;10460192	ES	0.5	50	50	ENSMUST00000237522.2	ENSMUSG00000035179.5	Ppp1r32	chr19	protein_coding	protein phosphatase 1, regulatory subunit 32
chr19	10451688	10451854	-	10451692	10451854	A3SS	0.5	50	50	ENSMUST00000237522.2	ENSMUSG00000035179.5	Ppp1r32	chr19	protein_coding	protein phosphatase 1, regulatory subunit 32
chr19	10459732	10459910	-	10459732	10460192	A5SS	0.5	50	50	ENSMUST00000237522.2	ENSMUSG00000035179.5	Ppp1r32	chr19	protein_coding	protein phosphatase 1, regulatory subunit 32
chr19	10494750	10503331	-	10494750	10502423	5pMXE	0.25	50	50	ENSMUST00000025570.8	ENSMUSG00000024668.9	Sdhaf2	chr19	protein_coding	succinate dehydrogenase complex assembly factor 2
chr19	10480493;10482889	10482798;10494344	-	10480493	10494344	cassetteExon	0.5	100	100	ENSMUST00000025570.8	ENSMUSG00000024668.9	Sdhaf2	chr19	protein_coding	succinate dehydrogenase complex assembly factor 2
chr19	10494750;10498422	10498313;10502423	-	10494750	10502423	cassetteExon	0.5	100	100	ENSMUST00000025570.8	ENSMUSG00000024668.9	Sdhaf2	chr19	protein_coding	succinate dehydrogenase complex assembly factor 2
chr19	10494750;10501361	10501225;10502423	-	10494750	10502423	cassetteExon	0.5	100	100	ENSMUST00000025570.8	ENSMUSG00000024668.9	Sdhaf2	chr19	protein_coding	succinate dehydrogenase complex assembly factor 2
chr19	10494453	10494684	-	10494453	10494533	A5SS	0.5	50	50	ENSMUST00000025570.8	ENSMUSG00000024668.9	Sdhaf2	chr19	protein_coding	succinate dehydrogenase complex assembly factor 2
chr19	10494750;10501361	10501225;10502423	-	10494750;10498422	10498313;10502423	MXE	0.5	100	100	ENSMUST00000235853.2	ENSMUSG00000024668.9	Sdhaf2	chr19	protein_coding	succinate dehydrogenase complex assembly factor 2
chr19	10494750	10498313	-	10494750	10503331	A5SS	0.25	50	50	ENSMUST00000235222.2	ENSMUSG00000024668.9	Sdhaf2	chr19	protein_coding	succinate dehydrogenase complex assembly factor 2
chr19	10494750	10501225	-	10494750	10503331	A5SS	0.25	50	50	ENSMUST00000235222.2	ENSMUSG00000024668.9	Sdhaf2	chr19	protein_coding	succinate dehydrogenase complex assembly factor 2
chr19	10509363;10509560	10509495;10510184	+	10509363	10510184	cassetteExon	0.5	100	100	ENSMUST00000235162.2	ENSMUSG00000034820.5	Cpsf7	chr19	protein_coding	cleavage and polyadenylation specific factor 7
chr19	10509363;10509698	10509495;10510184	+	10509363	10510184	cassetteExon	0.5	100	100	ENSMUST00000235162.2	ENSMUSG00000034820.5	Cpsf7	chr19	protein_coding	cleavage and polyadenylation specific factor 7
chr19	10509363;10509698	10509622;10510184	+	10509363	10510184	cassetteExon	0.5	100	100	ENSMUST00000235162.2	ENSMUSG00000034820.5	Cpsf7	chr19	protein_coding	cleavage and polyadenylation specific factor 7
chr19	10509363;10509698	10509625;10510184	+	10509363	10510184	cassetteExon	0.5	100	100	ENSMUST00000235162.2	ENSMUSG00000034820.5	Cpsf7	chr19	protein_coding	cleavage and polyadenylation specific factor 7
chr19	10502964	10503316	+	10502691	10503316	A5SS	0.5	50	50	ENSMUST00000235162.2	ENSMUSG00000034820.5	Cpsf7	chr19	protein_coding	cleavage and polyadenylation specific factor 7
chr19	10510802	10512468	+	10510829	10512468	A5SS	0.5	50	50	ENSMUST00000235162.2	ENSMUSG00000034820.5	Cpsf7	chr19	protein_coding	cleavage and polyadenylation specific factor 7
chr19	10509363;10509698	10509622;10510184	+	10509363;10509560	10509495;10510184	MXE	0.5	100	100	ENSMUST00000236206.2	ENSMUSG00000034820.5	Cpsf7	chr19	protein_coding	cleavage and polyadenylation specific factor 7
chr19	10509363;10509698	10509625;10510184	+	10509363;10509560	10509495;10510184	MXE	0.5	100	100	ENSMUST00000236206.2	ENSMUSG00000034820.5	Cpsf7	chr19	protein_coding	cleavage and polyadenylation specific factor 7
chr19	10509363	10509625	+	10509363	10509622	A3SS	0.25	50	50	ENSMUST00000236706.2	ENSMUSG00000034820.5	Cpsf7	chr19	protein_coding	cleavage and polyadenylation specific factor 7
chr19	10532528	10533479	-	10532528	10533063	5pMXE	0.33	50	50	ENSMUST00000145210.8	ENSMUSG00000024667.13	Tmem216	chr19	protein_coding	transmembrane protein 216
chr19	10528183	10528322	-	10517182	10528322	A3SS	0.5	50	50	ENSMUST00000145210.8	ENSMUSG00000024667.13	Tmem216	chr19	protein_coding	transmembrane protein 216
chr19	10532528	10533077	-	10532528	10533063	A5SS	0.33	50	50	ENSMUST00000145210.8	ENSMUSG00000024667.13	Tmem216	chr19	protein_coding	transmembrane protein 216
chr19	10532528	10533479	-	10532528	10533077	5pMXE	0.33	50	50	ENSMUST00000123788.8	ENSMUSG00000024667.13	Tmem216	chr19	protein_coding	transmembrane protein 216
chr19	10551336	10552201	-	10548968	10552201	A3SS	0.5	50	50	ENSMUST00000236099.2	ENSMUSG00000024666.7	Tmem138	chr19	protein_coding	transmembrane protein 138
chr19	10552299	10552604	-	10552372	10552604	A3SS	0.5	50	50	ENSMUST00000236099.2	ENSMUSG00000024666.7	Tmem138	chr19	protein_coding	transmembrane protein 138
chr19	10552875	10554333	-	10552875	10554234	A5SS	0.33	50	50	ENSMUST00000236099.2	ENSMUSG00000024666.7	Tmem138	chr19	protein_coding	transmembrane protein 138
chr19	10552875	10554448	-	10552875	10554234	A5SS	0.33	50	50	ENSMUST00000236099.2	ENSMUSG00000024666.7	Tmem138	chr19	protein_coding	transmembrane protein 138
chr19	10552875	10554333	-	10552875	10554448	A5SS	0.33	50	50	ENSMUST00000025568.3	ENSMUSG00000024666.7	Tmem138	chr19	protein_coding	transmembrane protein 138
chr19	10555447	10557827	+	10555447;10556438	10556346;10557827	ES	0.33	50	50	ENSMUST00000237814.2	ENSMUSG00000034445.9	Cyb561a3	chr19	protein_coding	cytochrome b561 family, member A3
chr19	10559860	10564055	+	10559860;10562754	10562546;10564055	ES	0.5	50	50	ENSMUST00000237814.2	ENSMUSG00000034445.9	Cyb561a3	chr19	protein_coding	cytochrome b561 family, member A3
chr19	10565342	10572546	+	10565342	10565889	3pMXE	0.33	50	50	ENSMUST00000237814.2	ENSMUSG00000034445.9	Cyb561a3	chr19	protein_coding	cytochrome b561 family, member A3
chr19	10565342	10566493	+	10565342	10565889	A3SS	0.33	50	50	ENSMUST00000237814.2	ENSMUSG00000034445.9	Cyb561a3	chr19	protein_coding	cytochrome b561 family, member A3
chr19	10554927	10556346	+	10555447	10556346	A5SS	0.33	50	50	ENSMUST00000237814.2	ENSMUSG00000034445.9	Cyb561a3	chr19	protein_coding	cytochrome b561 family, member A3
chr19	10554927	10557827	+	10556438	10557827	A5SS&ES	0.33	50	50	ENSMUST00000237814.2	ENSMUSG00000034445.9	Cyb561a3	chr19	protein_coding	cytochrome b561 family, member A3
chr19	10555257	10556346	+	10555447	10556346	A5SS	0.33	50	50	ENSMUST00000237814.2	ENSMUSG00000034445.9	Cyb561a3	chr19	protein_coding	cytochrome b561 family, member A3
chr19	10554927;10555447	10555098;10557827	+	10554927	10557827	cassetteExon	0.5	100	100	ENSMUST00000237564.2	ENSMUSG00000034445.9	Cyb561a3	chr19	protein_coding	cytochrome b561 family, member A3
chr19	10554927;10556438	10556346;10557827	+	10554927	10557827	cassetteExon	0.5	100	100	ENSMUST00000237564.2	ENSMUSG00000034445.9	Cyb561a3	chr19	protein_coding	cytochrome b561 family, member A3
chr19	10554927;10555257	10555098;10556346	+	10554927	10556346	cassetteExon	0.5	100	100	ENSMUST00000236743.2	ENSMUSG00000034445.9	Cyb561a3	chr19	protein_coding	cytochrome b561 family, member A3
chr19	10554927;10555447	10555098;10556346	+	10554927	10556346	cassetteExon	0.5	100	100	ENSMUST00000236743.2	ENSMUSG00000034445.9	Cyb561a3	chr19	protein_coding	cytochrome b561 family, member A3
chr19	10554927;10555447	10555098;10557827	+	10554927;10556438	10556346;10557827	MXE	0.5	100	100	ENSMUST00000236743.2	ENSMUSG00000034445.9	Cyb561a3	chr19	protein_coding	cytochrome b561 family, member A3
chr19	10554927	10556346	+	10555257	10556346	A5SS	0.33	50	50	ENSMUST00000235271.2	ENSMUSG00000034445.9	Cyb561a3	chr19	protein_coding	cytochrome b561 family, member A3
chr19	10555447	10557827	+	10556438	10557827	A5SS&ES	0.33	50	50	ENSMUST00000235271.2	ENSMUSG00000034445.9	Cyb561a3	chr19	protein_coding	cytochrome b561 family, member A3
chr19	10554927	10557827	+	10555447	10557827	A5SS	0.33	50	50	ENSMUST00000168445.2	ENSMUSG00000034445.9	Cyb561a3	chr19	protein_coding	cytochrome b561 family, member A3
chr19	10565342	10572546	+	10565342	10566493	3pMXE	0.33	50	50	ENSMUST00000237641.2	ENSMUSG00000034445.9	Cyb561a3	chr19	protein_coding	cytochrome b561 family, member A3
chr19	10570153	10570511	-	10566210	10570511	A3SS	0.5	50	50	ENSMUST00000237788.2	ENSMUSG00000034371.10	Tkfc	chr19	protein_coding	triokinase, FMN cyclase
chr19	10574385	10574699	-	10574385	10574674	A5SS	0.5	50	50	ENSMUST00000237788.2	ENSMUSG00000034371.10	Tkfc	chr19	protein_coding	triokinase, FMN cyclase
chr19	10581637	10582305	-	10581637	10582773	A5SS	0.33	50	50	ENSMUST00000237788.2	ENSMUSG00000034371.10	Tkfc	chr19	protein_coding	triokinase, FMN cyclase
chr19	10581637	10582583	-	10581637	10582773	A5SS	0.33	50	50	ENSMUST00000237788.2	ENSMUSG00000034371.10	Tkfc	chr19	protein_coding	triokinase, FMN cyclase
chr19	10581637	10582305	-	10581637	10582583	A5SS	0.33	50	50	ENSMUST00000236950.2	ENSMUSG00000034371.10	Tkfc	chr19	protein_coding	triokinase, FMN cyclase
chr19	10592332	10596413	+	10592332;10592954	10592852;10596413	ES	0.5	50	50	ENSMUST00000025649.10	ENSMUSG00000024740.11	Ddb1	chr19	protein_coding	damage specific DNA binding protein 1
chr19	10585836;10587191	10587156;10588066	+	10585836	10588066	cassetteExon	0.5	100	100	ENSMUST00000025649.10	ENSMUSG00000024740.11	Ddb1	chr19	protein_coding	damage specific DNA binding protein 1
chr19	10592332	10596413	+	10592332	10592852	3pMXE	0.5	50	50	ENSMUST00000236280.2	ENSMUSG00000024740.11	Ddb1	chr19	protein_coding	damage specific DNA binding protein 1
chr19	10584357	10585157	+	10584357	10602088	A3SS	0.5	50	50	ENSMUST00000237337.2	ENSMUSG00000024740.11	Ddb1	chr19	protein_coding	damage specific DNA binding protein 1
chr19	10601002	10602088	+	10584357	10602088	A5SS	0.5	50	50	ENSMUST00000237337.2	ENSMUSG00000024740.11	Ddb1	chr19	protein_coding	damage specific DNA binding protein 1
chr19	10585836	10588066	+	10585836	10587156	3pMXE	0.5	50	50	ENSMUST00000236722.2	ENSMUSG00000024740.11	Ddb1	chr19	protein_coding	damage specific DNA binding protein 1
chr19	10625872	10630414	+	10625872;10628012	10627925;10630414	ES	0.5	50	50	ENSMUST00000055115.9	ENSMUSG00000043789.9	Vwce	chr19	protein_coding	von Willebrand factor C and EGF domains
chr19	10615544	10616399	+	10615544	10618990	A3SS	0.5	50	50	ENSMUST00000055115.9	ENSMUSG00000043789.9	Vwce	chr19	protein_coding	von Willebrand factor C and EGF domains
chr19	10635446	10636733	+	10635446	10636785	A3SS	0.5	50	50	ENSMUST00000055115.9	ENSMUSG00000043789.9	Vwce	chr19	protein_coding	von Willebrand factor C and EGF domains
chr19	10647036	10647190	-	10647036	10649152	A5SS	0.5	50	50	ENSMUST00000025647.7	ENSMUSG00000024738.7	Pga5	chr19	protein_coding	pepsinogen 5, group I
chr19	10683672;10687805	10687634;10688635	+	10683672	10688635	cassetteExon	0.5	100	100	ENSMUST00000237240.2	ENSMUSG00000048832.10	Vps37c	chr19	protein_coding	vacuolar protein sorting 37C
chr19	10688717	10689959	+	10688717	10689888	A3SS	0.5	50	50	ENSMUST00000237240.2	ENSMUSG00000048832.10	Vps37c	chr19	protein_coding	vacuolar protein sorting 37C
chr19	10666260	10683574	+	10666173	10683574	A5SS	0.25	50	50	ENSMUST00000237240.2	ENSMUSG00000048832.10	Vps37c	chr19	protein_coding	vacuolar protein sorting 37C
chr19	10666343	10683574	+	10666173	10683574	A5SS	0.25	50	50	ENSMUST00000237240.2	ENSMUSG00000048832.10	Vps37c	chr19	protein_coding	vacuolar protein sorting 37C
chr19	10666347	10683574	+	10666173	10683574	A5SS	0.25	50	50	ENSMUST00000237240.2	ENSMUSG00000048832.10	Vps37c	chr19	protein_coding	vacuolar protein sorting 37C
chr19	10666260	10683574	+	10666347	10683574	A5SS	0.25	50	50	ENSMUST00000235927.2	ENSMUSG00000048832.10	Vps37c	chr19	protein_coding	vacuolar protein sorting 37C
chr19	10666343	10683574	+	10666347	10683574	A5SS	0.25	50	50	ENSMUST00000235927.2	ENSMUSG00000048832.10	Vps37c	chr19	protein_coding	vacuolar protein sorting 37C
chr19	10666260	10683574	+	10666343	10683574	A5SS	0.25	50	50	ENSMUST00000087951.7	ENSMUSG00000048832.10	Vps37c	chr19	protein_coding	vacuolar protein sorting 37C
chr19	10718366;10733341	10733249;10762597	+	10718366;10760445	10759126;10762597	MXE	0.5	100	100	ENSMUST00000186596.6	ENSMUSG00000067577.9	A430093F15Rik	chr19	lncRNA	RIKEN cDNA A430093F15 gene
chr19	10759328	10762597	+	10760445	10762597	A5SS	0.33	50	50	ENSMUST00000186596.6	ENSMUSG00000067577.9	A430093F15Rik	chr19	lncRNA	RIKEN cDNA A430093F15 gene
chr19	10718366;10733341	10733249;10762597	+	10718366;10759328	10759126;10762597	MXE	0.5	100	100	ENSMUST00000087947.9	ENSMUSG00000067577.9	A430093F15Rik	chr19	lncRNA	RIKEN cDNA A430093F15 gene
chr19	10725451	10733249	+	10718366	10733249	A5SS	0.5	50	50	ENSMUST00000188480.6	ENSMUSG00000067577.9	A430093F15Rik	chr19	lncRNA	RIKEN cDNA A430093F15 gene
chr19	10760445	10762597	+	10733341	10762597	A5SS	0.33	50	50	ENSMUST00000188480.6	ENSMUSG00000067577.9	A430093F15Rik	chr19	lncRNA	RIKEN cDNA A430093F15 gene
chr19	10733341	10762597	+	10759328	10762597	5pMXE	0.33	50	50	ENSMUST00000189565.3	ENSMUSG00000067577.9	A430093F15Rik	chr19	lncRNA	RIKEN cDNA A430093F15 gene
chr19	10768817	10771506	-	10768817;10770308	10770192;10771506	ES	0.5	50	50	ENSMUST00000080292.12	ENSMUSG00000024670.18	Cd6	chr19	protein_coding	CD6 antigen
chr19	10773752	10775680	-	10773752;10775342	10775040;10775680	ES	0.5	50	50	ENSMUST00000080292.12	ENSMUSG00000024670.18	Cd6	chr19	protein_coding	CD6 antigen
chr19	10768817	10771506	-	10768817	10770192	5pMXE	0.5	50	50	ENSMUST00000173613.2	ENSMUSG00000024670.18	Cd6	chr19	protein_coding	CD6 antigen
chr19	10820008	10820570	+	10817362	10820570	A5SS	0.5	50	50	ENSMUST00000138380.2	ENSMUSG00000024737.3	Slc15a3	chr19	protein_coding	solute carrier family 15, member 3
chr19	10842951	10844294	-	10842951;10844051	10843833;10844294	ES	0.5	50	50	ENSMUST00000025645.14	ENSMUSG00000024736.16	Tmem132a	chr19	protein_coding	transmembrane protein 132A
chr19	10851850;10855513	10855443;10859016	-	10851850	10859016	cassetteExon	0.5	100	100	ENSMUST00000038128.15	ENSMUSG00000034659.15	Tmem109	chr19	protein_coding	transmembrane protein 109
chr19	10851850;10857666	10857544;10859016	-	10851850	10859016	cassetteExon	0.5	100	100	ENSMUST00000038128.15	ENSMUSG00000034659.15	Tmem109	chr19	protein_coding	transmembrane protein 109
chr19	10858250	10859016	-	10851850	10859016	A3SS	0.25	50	50	ENSMUST00000038128.15	ENSMUSG00000034659.15	Tmem109	chr19	protein_coding	transmembrane protein 109
chr19	10851850	10859016	-	10851850	10857544	5pMXE	0.33	50	50	ENSMUST00000133303.8	ENSMUSG00000034659.15	Tmem109	chr19	protein_coding	transmembrane protein 109
chr19	10851850	10855443	-	10851850	10857544	A5SS	0.33	50	50	ENSMUST00000133303.8	ENSMUSG00000034659.15	Tmem109	chr19	protein_coding	transmembrane protein 109
chr19	10851850;10857666	10857544;10859016	-	10851850;10855513	10855443;10859016	MXE	0.5	100	100	ENSMUST00000144681.2	ENSMUSG00000034659.15	Tmem109	chr19	protein_coding	transmembrane protein 109
chr19	10858250	10859016	-	10855513	10859016	A3SS	0.25	50	50	ENSMUST00000144681.2	ENSMUSG00000034659.15	Tmem109	chr19	protein_coding	transmembrane protein 109
chr19	10858250	10859016	-	10857666	10859016	A3SS	0.25	50	50	ENSMUST00000128835.8	ENSMUSG00000034659.15	Tmem109	chr19	protein_coding	transmembrane protein 109
chr19	10875257	10876290	+	10875257	10876347	A3SS	0.5	50	50	ENSMUST00000025642.14	ENSMUSG00000024735.14	Prpf19	chr19	protein_coding	pre-mRNA processing factor 19
chr19	10876123	10876347	+	10875257	10876347	A5SS	0.5	50	50	ENSMUST00000025642.14	ENSMUSG00000024735.14	Prpf19	chr19	protein_coding	pre-mRNA processing factor 19
chr19	10892095	10892193	-	10892111	10892193	A3SS	0.5	50	50	ENSMUST00000168708.8	ENSMUSG00000024734.9	Zp1	chr19	protein_coding	zona pellucida glycoprotein 1
chr19	10922776	10925642	-	10922776	10924333	5pMXE	0.5	50	50	ENSMUST00000133836.2	ENSMUSG00000024732.8	Ccdc86	chr19	protein_coding	coiled-coil domain containing 86
chr19	10939766	10941400	-	10939766;10940437	10940299;10941400	ES	0.5	50	50	ENSMUST00000072748.13	ENSMUSG00000024731.16	Ms4a10	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 10
chr19	10944488	10945956	-	10944488;10945605	10945486;10945956	ES	0.5	50	50	ENSMUST00000072748.13	ENSMUSG00000024731.16	Ms4a10	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 10
chr19	10962238	10970483	-	10962208	10970483	A3SS	0.33	50	50	ENSMUST00000087923.4	ENSMUSG00000067571.5	Ms4a15	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 15
chr19	10962272	10970483	-	10962208	10970483	A3SS	0.33	50	50	ENSMUST00000087923.4	ENSMUSG00000067571.5	Ms4a15	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 15
chr19	10962272	10970483	-	10962238	10970483	A3SS	0.33	50	50	ENSMUST00000145110.3	ENSMUSG00000067571.5	Ms4a15	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 15
chr19	11025756	11027752	-	11025756	11033144	A5SS	0.5	50	50	ENSMUST00000238097.2	ENSMUSG00000075010.6	AW112010	chr19	lncRNA	expressed sequence AW112010
chr19	11124149	11140742	-	11124149	11136410	5pMXE	0.33	50	50	ENSMUST00000181284.8	ENSMUSG00000024728.14	Ms4a19	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 19
chr19	11124149	11140764	-	11124149	11136410	5pMXE	0.33	50	50	ENSMUST00000181284.8	ENSMUSG00000024728.14	Ms4a19	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 19
chr19	11140855;11142414	11142335;11142636	-	11140855	11142636	cassetteExon	0.5	100	100	ENSMUST00000181567.8	ENSMUSG00000024728.14	Ms4a19	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 19
chr19	11124149	11140764	-	11124149	11140742	A5SS	0.33	50	50	ENSMUST00000181567.8	ENSMUSG00000024728.14	Ms4a19	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 19
chr19	11147360	11149895	-	11147360;11149329	11149243;11149895	ES	0.5	50	50	ENSMUST00000073380.13	ENSMUSG00000057240.15	Ms4a13	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 13
chr19	11229247;11229470	11229414;11230543	-	11229247	11230543	cassetteExon	0.5	100	100	ENSMUST00000169159.3	ENSMUSG00000024673.10	Ms4a1	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 1
chr19	11255106	11261005	-	11255106	11256614	5pMXE	0.33	50	50	ENSMUST00000191110.7	ENSMUSG00000054523.14	Ms4a5	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 5
chr19	11255106;11255461	11255325;11256614	-	11255106	11256614	cassetteExon	0.5	100	100	ENSMUST00000191110.7	ENSMUSG00000054523.14	Ms4a5	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 5
chr19	11255106;11256742	11256614;11261005	-	11255106	11261005	cassetteExon	0.5	100	100	ENSMUST00000186937.7	ENSMUSG00000054523.14	Ms4a5	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 5
chr19	11255106	11255325	-	11255106	11261005	A5SS	0.33	50	50	ENSMUST00000186937.7	ENSMUSG00000054523.14	Ms4a5	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 5
chr19	11256742	11256947	-	11256742	11261005	A5SS	0.5	50	50	ENSMUST00000067673.13	ENSMUSG00000054523.14	Ms4a5	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 5
chr19	11301992	11305289	-	11301992;11303227	11303171;11305289	ES	0.5	50	50	ENSMUST00000025574.11	ENSMUSG00000024672.12	Ms4a7	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 7
chr19	11310730	11313371	-	11310730	11311680	5pMXE	0.5	50	50	ENSMUST00000025574.11	ENSMUSG00000024672.12	Ms4a7	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 7
chr19	11299782	11301786	-	11299764	11301786	A3SS	0.5	50	50	ENSMUST00000025574.11	ENSMUSG00000024672.12	Ms4a7	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 7
chr19	11396482	11403560	+	11396482;11398723	11398622;11403560	ES	0.5	50	50	ENSMUST00000072729.10	ENSMUSG00000024675.20	Ms4a4c	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 4C
chr19	11438722;11440152	11440007;11440323	+	11438722	11440323	cassetteExon	0.5	100	100	ENSMUST00000035258.10	ENSMUSG00000056290.17	Ms4a4b	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 4B
chr19	11438722	11440323	+	11440152	11440323	5pMXE	0.5	50	50	ENSMUST00000123758.2	ENSMUSG00000056290.17	Ms4a4b	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 4B
chr19	11457833	11461811	-	11454193	11461811	A3SS	0.5	50	50	ENSMUST00000186054.2	ENSMUSG00000099757.2	BE692007	chr19	lncRNA	expressed sequence BE692007
chr19	11482219	11485655	+	11482219	11483520	3pMXE	0.5	50	50	ENSMUST00000189635.7	ENSMUSG00000058470.11	Gm8369	chr19	protein_coding	predicted gene 8369
chr19	11463635	11464217	+	11463635	11479523	A3SS	0.5	50	50	ENSMUST00000189635.7	ENSMUSG00000058470.11	Gm8369	chr19	protein_coding	predicted gene 8369
chr19	11469499	11479523	+	11463635	11479523	A5SS	0.33	50	50	ENSMUST00000189635.7	ENSMUSG00000058470.11	Gm8369	chr19	protein_coding	predicted gene 8369
chr19	11470592	11479523	+	11463635	11479523	A5SS	0.33	50	50	ENSMUST00000189635.7	ENSMUSG00000058470.11	Gm8369	chr19	protein_coding	predicted gene 8369
chr19	11482219	11485655	+	11482219;11483652	11483520;11485655	ES	0.5	50	50	ENSMUST00000186423.7	ENSMUSG00000058470.11	Gm8369	chr19	protein_coding	predicted gene 8369
chr19	11469499;11470592	11470459;11479523	+	11469499	11479523	cassetteExon	0.5	100	100	ENSMUST00000186423.7	ENSMUSG00000058470.11	Gm8369	chr19	protein_coding	predicted gene 8369
chr19	11501330	11503985	+	11501330	11504064	A3SS	0.5	50	50	ENSMUST00000163078.8	ENSMUSG00000024677.14	Ms4a6b	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 6B
chr19	11504261	11504753	+	11504261	11505938	A3SS	0.5	50	50	ENSMUST00000163078.8	ENSMUSG00000024677.14	Ms4a6b	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 6B
chr19	11567486	11570229	-	11567560	11570229	A3SS	0.5	50	50	ENSMUST00000025582.11	ENSMUSG00000024679.11	Ms4a6d	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 6D
chr19	11570285	11570402	-	11570285	11579194	A5SS	0.33	50	50	ENSMUST00000025582.11	ENSMUSG00000024679.11	Ms4a6d	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 6D
chr19	11570285	11570633	-	11570285	11579194	A5SS	0.33	50	50	ENSMUST00000025582.11	ENSMUSG00000024679.11	Ms4a6d	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 6D
chr19	11570285	11570402	-	11570285	11570633	A5SS	0.33	50	50	ENSMUST00000155669.8	ENSMUSG00000024679.11	Ms4a6d	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 6D
chr19	11599541	11600924	-	11599541;11600146	11600047;11600924	ES	0.5	50	50	ENSMUST00000186978.7	ENSMUSG00000024680.13	Ms4a2	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 2
chr19	11594935;11595878	11595780;11596218	-	11594935	11596218	cassetteExon	0.5	100	100	ENSMUST00000186978.7	ENSMUSG00000024680.13	Ms4a2	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 2
chr19	11594935;11596147	11595780;11596981	-	11594935;11596262	11596218;11596981	MXE	0.5	100	100	ENSMUST00000186978.7	ENSMUSG00000024680.13	Ms4a2	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 2
chr19	11596373	11596981	-	11596262	11596981	A3SS	0.33	50	50	ENSMUST00000186978.7	ENSMUSG00000024680.13	Ms4a2	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 2
chr19	11597037	11599407	-	11597037	11599527	A5SS	0.5	50	50	ENSMUST00000186978.7	ENSMUSG00000024680.13	Ms4a2	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 2
chr19	11595878;11596147	11596091;11596981	-	11595878;11596262	11596218;11596981	MXE	0.5	100	100	ENSMUST00000025583.12	ENSMUSG00000024680.13	Ms4a2	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 2
chr19	11595878;11596147	11596091;11596981	-	11595878;11596373	11596218;11596981	MXE	0.5	100	100	ENSMUST00000164792.8	ENSMUSG00000024680.13	Ms4a2	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 2
chr19	11594935;11596373	11596218;11596981	-	11594935;11596147	11595780;11596981	MXE	0.5	100	100	ENSMUST00000189641.2	ENSMUSG00000024680.13	Ms4a2	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 2
chr19	11596147	11596981	-	11596373	11596981	3pMXE	0.33	50	50	ENSMUST00000186413.2	ENSMUSG00000024680.13	Ms4a2	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 2
chr19	11616681	11618031	-	11616663	11618031	A3SS	0.5	50	50	ENSMUST00000186023.7	ENSMUSG00000024681.12	Ms4a3	chr19	protein_coding	membrane-spanning 4-domains, subfamily A, member 3
chr19	11627063;11629023	11628842;11637816	-	11627063	11637816	cassetteExon	0.5	100	100	ENSMUST00000135994.2	ENSMUSG00000055895.7	Oosp2	chr19	protein_coding	oocyte secreted protein 2
chr19	11645780	11666031	-	11645780;11664796	11664699;11666031	ES	0.5	50	50	ENSMUST00000048214.9	ENSMUSG00000041857.11	Oosp1	chr19	protein_coding	oocyte secreted protein 1
chr19	11645780;11666212	11666031;11668306	-	11645780	11668306	cassetteExon	0.5	100	100	ENSMUST00000186557.2	ENSMUSG00000041857.11	Oosp1	chr19	protein_coding	oocyte secreted protein 1
chr19	11645780	11664699	-	11645780	11668306	A5SS	0.33	50	50	ENSMUST00000186557.2	ENSMUSG00000041857.11	Oosp1	chr19	protein_coding	oocyte secreted protein 1
chr19	11674535	11678278	+	11674535;11676894	11676716;11678278	ES	0.5	50	50	ENSMUST00000069760.13	ENSMUSG00000055933.14	Oosp3	chr19	protein_coding	oocyte secreted protein 3
chr19	11766995;11767457	11767412;11769110	-	11766995	11769110	cassetteExon	0.5	100	100	ENSMUST00000075304.14	ENSMUSG00000041488.17	Stx3	chr19	protein_coding	syntaxin 3
chr19	11766995;11767457	11767412;11780858	-	11766995;11769209	11769110;11780858	MXE	0.5	100	100	ENSMUST00000075304.14	ENSMUSG00000041488.17	Stx3	chr19	protein_coding	syntaxin 3
chr19	11759044	11760164	-	11754534	11760164	A3SS	0.5	50	50	ENSMUST00000075304.14	ENSMUSG00000041488.17	Stx3	chr19	protein_coding	syntaxin 3
chr19	11760500	11762754	-	11760274	11762754	A3SS	0.5	50	50	ENSMUST00000075304.14	ENSMUSG00000041488.17	Stx3	chr19	protein_coding	syntaxin 3
chr19	11767457	11780858	-	11767457;11769209	11769110;11780858	ES	0.5	50	50	ENSMUST00000047698.14	ENSMUSG00000041488.17	Stx3	chr19	protein_coding	syntaxin 3
chr19	11766949	11767412	-	11766995	11767412	A3SS	0.5	50	50	ENSMUST00000047698.14	ENSMUSG00000041488.17	Stx3	chr19	protein_coding	syntaxin 3
chr19	11759044;11760274	11760164;11762754	-	11759044;11760500	11760390;11762754	MXE	0.5	100	100	ENSMUST00000069285.6	ENSMUSG00000041488.17	Stx3	chr19	protein_coding	syntaxin 3
chr19	11759044	11760390	-	11759044	11760164	5pMXE	0.5	50	50	ENSMUST00000211089.2	ENSMUSG00000041488.17	Stx3	chr19	protein_coding	syntaxin 3
chr19	11766995	11769110	-	11767457	11769110	A3SS&ES	0.5	50	50	ENSMUST00000211047.2	ENSMUSG00000041488.17	Stx3	chr19	protein_coding	syntaxin 3
chr19	11806439	11806877	-	11806275	11806877	A3SS	0.5	50	50	ENSMUST00000213141.2	ENSMUSG00000048292.4	Olfr1417	chr19	protein_coding	olfactory receptor 1417
chr19	11898927;11899358	11899285;11899831	+	11898927	11899831	cassetteExon	0.5	100	100	ENSMUST00000061618.9	ENSMUSG00000046139.9	Patl1	chr19	protein_coding	protein associated with topoisomerase II homolog 1 (yeast)
chr19	12066979	12068923	-	12066979	12067747	5pMXE	0.33	50	50	ENSMUST00000219996.2	ENSMUSG00000044994.11	Olfr1426	chr19	protein_coding	olfactory receptor 1426
chr19	12066979	12069047	-	12066979	12067747	5pMXE	0.33	50	50	ENSMUST00000219996.2	ENSMUSG00000044994.11	Olfr1426	chr19	protein_coding	olfactory receptor 1426
chr19	12066310	12066809	-	12066314	12066809	A3SS	0.5	50	50	ENSMUST00000219996.2	ENSMUSG00000044994.11	Olfr1426	chr19	protein_coding	olfactory receptor 1426
chr19	12066314	12066856	-	12066314	12066809	A5SS	0.5	50	50	ENSMUST00000219996.2	ENSMUSG00000044994.11	Olfr1426	chr19	protein_coding	olfactory receptor 1426
chr19	12066979	12069047	-	12066979	12068923	5pMXE	0.33	50	50	ENSMUST00000220005.2	ENSMUSG00000044994.11	Olfr1426	chr19	protein_coding	olfactory receptor 1426
chr19	12066310	12066856	-	12066314	12066856	A3SS	0.5	50	50	ENSMUST00000219005.2	ENSMUSG00000044994.11	Olfr1426	chr19	protein_coding	olfactory receptor 1426
chr19	12066310	12066809	-	12066310	12066856	A5SS	0.5	50	50	ENSMUST00000219155.2	ENSMUSG00000044994.11	Olfr1426	chr19	protein_coding	olfactory receptor 1426
chr19	12076452	12080496	-	12077029	12080496	A3SS	0.33	50	50	ENSMUST00000216069.2	ENSMUSG00000067525.4	Olfr1427	chr19	protein_coding	olfactory receptor 1427
chr19	12078508	12080496	-	12077029	12080496	A3SS	0.33	50	50	ENSMUST00000216069.2	ENSMUSG00000067525.4	Olfr1427	chr19	protein_coding	olfactory receptor 1427
chr19	12076452	12080496	-	12078508	12080496	A3SS	0.33	50	50	ENSMUST00000215374.2	ENSMUSG00000067525.4	Olfr1427	chr19	protein_coding	olfactory receptor 1427
chr19	12098012	12099444	-	12097974	12099444	A3SS	0.33	50	50	ENSMUST00000216205.2	ENSMUSG00000067522.4	Olfr76	chr19	protein_coding	olfactory receptor 76
chr19	12098071	12099444	-	12097974	12099444	A3SS	0.33	50	50	ENSMUST00000216205.2	ENSMUSG00000067522.4	Olfr76	chr19	protein_coding	olfactory receptor 76
chr19	12098071	12099444	-	12098012	12099444	A3SS	0.33	50	50	ENSMUST00000213471.2	ENSMUSG00000067522.4	Olfr76	chr19	protein_coding	olfactory receptor 76
chr19	12144470	12147245	-	12144473	12147245	A3SS	0.5	50	50	ENSMUST00000219261.2	ENSMUSG00000108889.3	Olfr1555-ps1	chr19	protein_coding	olfactory receptor 1555, pseudogene 1
chr19	12178301;12180485	12180303;12182744	+	12178301	12182744	cassetteExon	0.5	100	100	ENSMUST00000213759.2	ENSMUSG00000094133.3	Olfr1431	chr19	protein_coding	olfactory receptor 1431
chr19	12238568	12245577	+	12238568;12239490	12239392;12245577	ES	0.25	50	50	ENSMUST00000207969.4	ENSMUSG00000060049.6	Olfr235	chr19	protein_coding	olfactory receptor 235
chr19	12239490;12240513	12240323;12245577	+	12239490	12245577	cassetteExon	0.5	100	100	ENSMUST00000207969.4	ENSMUSG00000060049.6	Olfr235	chr19	protein_coding	olfactory receptor 235
chr19	12241399	12245577	+	12239490	12245577	A5SS	0.25	50	50	ENSMUST00000207969.4	ENSMUSG00000060049.6	Olfr235	chr19	protein_coding	olfactory receptor 235
chr19	12238568	12245577	+	12240513	12245577	A5SS&ES	0.25	50	50	ENSMUST00000214638.3	ENSMUSG00000060049.6	Olfr235	chr19	protein_coding	olfactory receptor 235
chr19	12241399	12245577	+	12240513	12245577	A5SS	0.25	50	50	ENSMUST00000214638.3	ENSMUSG00000060049.6	Olfr235	chr19	protein_coding	olfactory receptor 235
chr19	12241399	12245577	+	12238568	12245577	A5SS	0.25	50	50	ENSMUST00000214613.3	ENSMUSG00000060049.6	Olfr235	chr19	protein_coding	olfactory receptor 235
chr19	12364786;12365907	12365841;12371609	+	12364786	12371609	cassetteExon	0.5	100	100	ENSMUST00000217062.3	ENSMUSG00000046650.5	Olfr1440	chr19	protein_coding	olfactory receptor 1440
chr19	12364786;12365965	12365841;12371609	+	12364786	12371609	cassetteExon	0.5	100	100	ENSMUST00000217062.3	ENSMUSG00000046650.5	Olfr1440	chr19	protein_coding	olfactory receptor 1440
chr19	12364786	12372615	+	12364786	12371609	A3SS	0.33	50	50	ENSMUST00000217062.3	ENSMUSG00000046650.5	Olfr1440	chr19	protein_coding	olfactory receptor 1440
chr19	12364786	12372615	+	12364786;12365965	12365841;12372615	ES	0.33	50	50	ENSMUST00000216169.2	ENSMUSG00000046650.5	Olfr1440	chr19	protein_coding	olfactory receptor 1440
chr19	12364786;12371996	12371609;12372615	+	12364786;12365965	12365841;12372615	MXE	0.5	100	100	ENSMUST00000216169.2	ENSMUSG00000046650.5	Olfr1440	chr19	protein_coding	olfactory receptor 1440
chr19	12365965;12371996	12371609;12372615	+	12365965	12372615	cassetteExon	0.5	100	100	ENSMUST00000216169.2	ENSMUSG00000046650.5	Olfr1440	chr19	protein_coding	olfactory receptor 1440
chr19	12364786	12372615	+	12364786	12365841	A3SS&ES	0.33	50	50	ENSMUST00000216145.2	ENSMUSG00000046650.5	Olfr1440	chr19	protein_coding	olfactory receptor 1440
chr19	12365965	12371609	+	12365907	12371609	A5SS	0.33	50	50	ENSMUST00000216145.2	ENSMUSG00000046650.5	Olfr1440	chr19	protein_coding	olfactory receptor 1440
chr19	12364786	12372615	+	12364786;12371996	12371609;12372615	ES	0.33	50	50	ENSMUST00000214082.2	ENSMUSG00000046650.5	Olfr1440	chr19	protein_coding	olfactory receptor 1440
chr19	12365965	12372615	+	12365965	12371609	A3SS	0.5	50	50	ENSMUST00000213657.2	ENSMUSG00000046650.5	Olfr1440	chr19	protein_coding	olfactory receptor 1440
chr19	12554534	12564199	+	12554534	12561287	3pMXE	0.5	50	50	ENSMUST00000139270.8	ENSMUSG00000024691.14	Fam111a	chr19	protein_coding	family with sequence similarity 111, member A
chr19	12554534;12561486	12561287;12564199	+	12554534	12564199	cassetteExon	0.5	100	100	ENSMUST00000151307.8	ENSMUSG00000024691.14	Fam111a	chr19	protein_coding	family with sequence similarity 111, member A
chr19	12546191	12550878	+	12546191	12550895	A3SS	0.5	50	50	ENSMUST00000151307.8	ENSMUSG00000024691.14	Fam111a	chr19	protein_coding	family with sequence similarity 111, member A
chr19	12577547	12590830	+	12577453	12590830	A5SS	0.5	50	50	ENSMUST00000181868.8	ENSMUSG00000071633.12	Gm4952	chr19	protein_coding	predicted gene 4952
chr19	12610970	12611786	+	12610970	12617136	A3SS	0.5	50	50	ENSMUST00000044976.12	ENSMUSG00000063683.13	Glyat	chr19	protein_coding	glycine-N-acyltransferase
chr19	12617047	12617136	+	12610970	12617136	A5SS	0.5	50	50	ENSMUST00000044976.12	ENSMUSG00000063683.13	Glyat	chr19	protein_coding	glycine-N-acyltransferase
chr19	12617267	12623667	+	12617230	12623667	A5SS	0.5	50	50	ENSMUST00000044976.12	ENSMUSG00000063683.13	Glyat	chr19	protein_coding	glycine-N-acyltransferase
chr19	12648214	12648388	+	12648076	12648388	A5SS	0.33	50	50	ENSMUST00000207341.3	ENSMUSG00000044441.6	Olfr1442	chr19	protein_coding	olfactory receptor 1442
chr19	12648233	12648388	+	12648076	12648388	A5SS	0.33	50	50	ENSMUST00000207341.3	ENSMUSG00000044441.6	Olfr1442	chr19	protein_coding	olfactory receptor 1442
chr19	12648233	12648388	+	12648214	12648388	A5SS	0.33	50	50	ENSMUST00000208494.3	ENSMUSG00000044441.6	Olfr1442	chr19	protein_coding	olfactory receptor 1442
chr19	12687050	12688376	+	12687050	12688346	A3SS	0.5	50	50	ENSMUST00000025598.10	ENSMUSG00000024694.10	Keg1	chr19	protein_coding	kidney expressed gene 1
chr19	12693433	12696273	+	12693433	12696144	A3SS	0.5	50	50	ENSMUST00000025598.10	ENSMUSG00000024694.10	Keg1	chr19	protein_coding	kidney expressed gene 1
chr19	12687114	12688346	+	12687050	12688346	A5SS	0.5	50	50	ENSMUST00000025598.10	ENSMUSG00000024694.10	Keg1	chr19	protein_coding	kidney expressed gene 1
chr19	12693527	12695487	-	12683547	12695487	A3SS	0.5	50	50	ENSMUST00000125496.8	ENSMUSG00000084981.8	Gm15962	chr19	lncRNA	predicted gene 15962
chr19	12776043	12781297	+	12773662	12781297	A5SS	0.5	50	50	ENSMUST00000235690.2	ENSMUSG00000024696.10	Lpxn	chr19	protein_coding	leupaxin
chr19	12867953;12868932	12868823;12870796	-	12867953	12870796	cassetteExon	0.5	100	100	ENSMUST00000216805.3	ENSMUSG00000057817.7	Olfr1446	chr19	protein_coding	olfactory receptor 1446
chr19	12879159	12880653	-	12879156	12880653	A3SS	0.5	50	50	ENSMUST00000216989.2	ENSMUSG00000060303.5	Olfr1447	chr19	protein_coding	olfactory receptor 1447
chr19	12898411	12901665	-	12898411	12901445	A5SS	0.5	50	50	ENSMUST00000213713.2	ENSMUSG00000048456.4	Olfr1448	chr19	protein_coding	olfactory receptor 1448
chr19	12908399	12908750	+	12908399	12908747	A3SS	0.5	50	50	ENSMUST00000214079.2	ENSMUSG00000049498.6	Olfr1449	chr19	protein_coding	olfactory receptor 1449
chr19	12908274	12908750	+	12908399	12908750	A5SS	0.5	50	50	ENSMUST00000208624.3	ENSMUSG00000049498.6	Olfr1449	chr19	protein_coding	olfactory receptor 1449
chr19	12930266	12930937	+	12927862	12930937	A5SS	0.5	50	50	ENSMUST00000213925.2	ENSMUSG00000062892.5	Olfr1450	chr19	protein_coding	olfactory receptor 1450
chr19	13038270	13040749	+	13038106	13040749	A5SS	0.5	50	50	ENSMUST00000213806.2	ENSMUSG00000094986.4	Olfr1454	chr19	protein_coding	olfactory receptor 1454
chr19	13038270	13040535	+	13038270	13040749	A3SS	0.5	50	50	ENSMUST00000214695.2	ENSMUSG00000094986.4	Olfr1454	chr19	protein_coding	olfactory receptor 1454
chr19	13072568	13074863	-	13072498	13074863	A3SS	0.33	50	50	ENSMUST00000214561.3	ENSMUSG00000061637.6	Olfr1457	chr19	protein_coding	olfactory receptor 1457
chr19	13073010	13074863	-	13072498	13074863	A3SS	0.33	50	50	ENSMUST00000214561.3	ENSMUSG00000061637.6	Olfr1457	chr19	protein_coding	olfactory receptor 1457
chr19	13072568	13074863	-	13073010	13074863	A3SS	0.33	50	50	ENSMUST00000215229.2	ENSMUSG00000061637.6	Olfr1457	chr19	protein_coding	olfactory receptor 1457
chr19	13122292	13126607	-	13124049	13126607	A3SS	0.5	50	50	ENSMUST00000213493.2	ENSMUSG00000057503.7	Olfr1459	chr19	protein_coding	olfactory receptor 1459
chr19	13141165	13142359	+	13140921	13142359	A5SS	0.5	50	50	ENSMUST00000207113.3	ENSMUSG00000045883.6	Olfr1461	chr19	protein_coding	olfactory receptor 1461
chr19	13421108;13421563	13421273;13422346	+	13421108	13422346	cassetteExon	0.5	100	100	ENSMUST00000217482.2	ENSMUSG00000096320.3	Olfr1471	chr19	protein_coding	olfactory receptor 1471
chr19	13421108	13422346	+	13421108	13421273	A3SS&ES	0.5	50	50	ENSMUST00000213460.2	ENSMUSG00000096320.3	Olfr1471	chr19	protein_coding	olfactory receptor 1471
chr19	13447519	13448376	+	13447519	13448304	A3SS	0.5	50	50	ENSMUST00000220113.2	ENSMUSG00000096273.4	Olfr1474	chr19	protein_coding	olfactory receptor 1474
chr19	13478520	13479684	+	13478036	13479684	A5SS	0.5	50	50	ENSMUST00000217001.2	ENSMUSG00000071629.4	Olfr1477	chr19	protein_coding	olfactory receptor 1477
chr19	13505403	13505791	+	13505403;13505523	13505488;13505791	ES	0.33	50	50	ENSMUST00000207987.3	ENSMUSG00000095484.5	Olfr1480	chr19	protein_coding	olfactory receptor 1480
chr19	13505882	13507013	+	13505882	13507091	A3SS	0.5	50	50	ENSMUST00000207987.3	ENSMUSG00000095484.5	Olfr1480	chr19	protein_coding	olfactory receptor 1480
chr19	13505430	13505791	+	13505523	13505791	A5SS&ES	0.33	50	50	ENSMUST00000207987.3	ENSMUSG00000095484.5	Olfr1480	chr19	protein_coding	olfactory receptor 1480
chr19	13505403	13505791	+	13505430	13505791	A5SS	0.33	50	50	ENSMUST00000207904.2	ENSMUSG00000095484.5	Olfr1480	chr19	protein_coding	olfactory receptor 1480
chr19	13561020;13561471	13561329;13562722	+	13561020	13562722	cassetteExon	0.5	100	100	ENSMUST00000208104.3	ENSMUSG00000096289.5	Olfr1484	chr19	protein_coding	olfactory receptor 1484
chr19	13561020	13562644	+	13561020	13562722	A3SS	0.33	50	50	ENSMUST00000208104.3	ENSMUSG00000096289.5	Olfr1484	chr19	protein_coding	olfactory receptor 1484
chr19	13561020	13562644	+	13561020;13561471	13561329;13562644	ES	0.33	50	50	ENSMUST00000216014.3	ENSMUSG00000096289.5	Olfr1484	chr19	protein_coding	olfactory receptor 1484
chr19	13561020	13562722	+	13561020	13561329	A3SS&ES	0.33	50	50	ENSMUST00000216014.3	ENSMUSG00000096289.5	Olfr1484	chr19	protein_coding	olfactory receptor 1484
chr19	13561471	13562722	+	13561471	13562644	A3SS	0.5	50	50	ENSMUST00000216014.3	ENSMUSG00000096289.5	Olfr1484	chr19	protein_coding	olfactory receptor 1484
chr19	13560949	13562644	+	13561471	13562644	A5SS&ES	0.33	50	50	ENSMUST00000216014.3	ENSMUSG00000096289.5	Olfr1484	chr19	protein_coding	olfactory receptor 1484
chr19	13561020	13562644	+	13561020	13561329	A3SS&ES	0.33	50	50	ENSMUST00000216369.2	ENSMUSG00000096289.5	Olfr1484	chr19	protein_coding	olfactory receptor 1484
chr19	13561020	13562644	+	13560949	13562644	A5SS	0.33	50	50	ENSMUST00000217451.3	ENSMUSG00000096289.5	Olfr1484	chr19	protein_coding	olfactory receptor 1484
chr19	13594883	13596580	+	13594883	13596502	A3SS	0.5	50	50	ENSMUST00000217061.3	ENSMUSG00000094846.5	Olfr1487	chr19	protein_coding	olfactory receptor 1487
chr19	13594812	13596580	+	13594883	13596580	A5SS	0.33	50	50	ENSMUST00000209005.4	ENSMUSG00000094846.5	Olfr1487	chr19	protein_coding	olfactory receptor 1487
chr19	13595361	13596580	+	13594883	13596580	A5SS	0.33	50	50	ENSMUST00000209005.4	ENSMUSG00000094846.5	Olfr1487	chr19	protein_coding	olfactory receptor 1487
chr19	13595361	13596580	+	13594812	13596580	A5SS	0.33	50	50	ENSMUST00000208347.3	ENSMUSG00000094846.5	Olfr1487	chr19	protein_coding	olfactory receptor 1487
chr19	13628501	13634797	+	13628501	13631792	A3SS	0.5	50	50	ENSMUST00000213900.2	ENSMUSG00000061387.4	Olfr1490	chr19	protein_coding	olfactory receptor 1490
chr19	13674926	13676977	+	13674926	13676974	A3SS	0.5	50	50	ENSMUST00000214007.2	ENSMUSG00000051156.3	Olfr1491	chr19	protein_coding	olfactory receptor 1491
chr19	13677052	13680551	+	13677052	13682191	A3SS	0.33	50	50	ENSMUST00000214007.2	ENSMUSG00000051156.3	Olfr1491	chr19	protein_coding	olfactory receptor 1491
chr19	13677052	13682188	+	13677052	13682191	A3SS	0.33	50	50	ENSMUST00000214007.2	ENSMUSG00000051156.3	Olfr1491	chr19	protein_coding	olfactory receptor 1491
chr19	13677052;13680601	13680551;13682188	+	13677052	13682188	cassetteExon	0.5	100	100	ENSMUST00000216377.2	ENSMUSG00000051156.3	Olfr1491	chr19	protein_coding	olfactory receptor 1491
chr19	13700678;13701217	13701167;13703608	+	13700678	13703608	cassetteExon	0.5	100	100	ENSMUST00000207208.3	ENSMUSG00000109520.3	Olfr1493-ps1	chr19	protein_coding	olfactory receptor 1493, pseudogene 1
chr19	13720184	13722381	+	13720184	13726470	A3SS	0.33	50	50	ENSMUST00000207836.3	ENSMUSG00000050865.6	Olfr1494	chr19	protein_coding	olfactory receptor 1494
chr19	13720184	13726806	+	13720184	13726470	A3SS	0.33	50	50	ENSMUST00000207836.3	ENSMUSG00000050865.6	Olfr1494	chr19	protein_coding	olfactory receptor 1494
chr19	13720184	13726806	+	13720184;13722432	13722381;13726806	ES	0.5	50	50	ENSMUST00000214479.2	ENSMUSG00000050865.6	Olfr1494	chr19	protein_coding	olfactory receptor 1494
chr19	13742757	13745703	+	13742779	13745703	A5SS	0.5	50	50	ENSMUST00000216980.2	ENSMUSG00000047207.4	Olfr1495	chr19	protein_coding	olfactory receptor 1495
chr19	13805637	13806085	-	13805934	13806085	A3SS	0.5	50	50	ENSMUST00000214475.2	ENSMUSG00000054526.6	Olfr1500	chr19	protein_coding	olfactory receptor 1500
chr19	13806172	13806443	-	13806217	13806443	A3SS	0.5	50	50	ENSMUST00000214475.2	ENSMUSG00000054526.6	Olfr1500	chr19	protein_coding	olfactory receptor 1500
chr19	13807254	13807803	-	13807231	13807803	A3SS	0.33	50	50	ENSMUST00000067670.5	ENSMUSG00000054526.6	Olfr1500	chr19	protein_coding	olfactory receptor 1500
chr19	13807370	13807803	-	13807231	13807803	A3SS	0.33	50	50	ENSMUST00000067670.5	ENSMUSG00000054526.6	Olfr1500	chr19	protein_coding	olfactory receptor 1500
chr19	13807370	13807803	-	13807254	13807803	A3SS	0.33	50	50	ENSMUST00000216287.2	ENSMUSG00000054526.6	Olfr1500	chr19	protein_coding	olfactory receptor 1500
chr19	13816549	13827980	-	13816549	13827532	5pMXE	0.5	50	50	ENSMUST00000215350.2	ENSMUSG00000057270.4	Olfr1501	chr19	protein_coding	olfactory receptor 1501
chr19	13893700	13896166	+	13893582	13896166	A5SS	0.5	50	50	ENSMUST00000216623.2	ENSMUSG00000062314.4	Olfr1505	chr19	protein_coding	olfactory receptor 1505
chr19	14445635;14469163	14469147;14495136	-	14445635;14493739	14493723;14495136	MXE	0.5	100	100	ENSMUST00000052011.15	ENSMUSG00000024642.18	Tle4	chr19	protein_coding	transducin-like enhancer of split 4
chr19	14571792	14572826	-	14571792	14572954	A5SS	0.5	50	50	ENSMUST00000052011.15	ENSMUSG00000024642.18	Tle4	chr19	protein_coding	transducin-like enhancer of split 4
chr19	15898360	15924649	-	15898360	15902228	5pMXE	0.33	50	50	ENSMUST00000025542.10	ENSMUSG00000024640.10	Psat1	chr19	protein_coding	phosphoserine aminotransferase 1
chr19	15898360	15901668	-	15898360	15902228	A5SS	0.33	50	50	ENSMUST00000025542.10	ENSMUSG00000024640.10	Psat1	chr19	protein_coding	phosphoserine aminotransferase 1
chr19	15898360	15924649	-	15898360	15901668	5pMXE	0.33	50	50	ENSMUST00000162053.8	ENSMUSG00000024640.10	Psat1	chr19	protein_coding	phosphoserine aminotransferase 1
chr19	15935525	15936896	-	15933767	15936896	A3SS	0.5	50	50	ENSMUST00000047704.8	ENSMUSG00000041491.9	Cep78	chr19	protein_coding	centrosomal protein 78
chr19	15933767	15933967	-	15933767	15936896	A5SS	0.5	50	50	ENSMUST00000047704.8	ENSMUSG00000041491.9	Cep78	chr19	protein_coding	centrosomal protein 78
chr19	16293535	16294454	+	16293535	16309441	A3SS	0.5	50	50	ENSMUST00000025541.6	ENSMUSG00000024639.6	Gnaq	chr19	protein_coding	guanine nucleotide binding protein, alpha q polypeptide
chr19	16416807	16511077	+	16414181	16511077	A5SS	0.5	50	50	ENSMUST00000025602.4	ENSMUSG00000024697.5	Gna14	chr19	protein_coding	guanine nucleotide binding protein, alpha 14
chr19	16720422	16723025	-	16720422;16722321	16722150;16723025	ES	0.5	50	50	ENSMUST00000068156.8	ENSMUSG00000046230.12	Vps13a	chr19	protein_coding	vacuolar protein sorting 13A
chr19	16610526	16613133	-	16598073	16613133	A3SS	0.33	50	50	ENSMUST00000068156.8	ENSMUSG00000046230.12	Vps13a	chr19	protein_coding	vacuolar protein sorting 13A
chr19	16612957	16613133	-	16598073	16613133	A3SS	0.33	50	50	ENSMUST00000068156.8	ENSMUSG00000046230.12	Vps13a	chr19	protein_coding	vacuolar protein sorting 13A
chr19	16639323	16641116	-	16638489	16641116	A3SS	0.5	50	50	ENSMUST00000068156.8	ENSMUSG00000046230.12	Vps13a	chr19	protein_coding	vacuolar protein sorting 13A
chr19	16598073	16602142	-	16598073	16613133	A5SS	0.5	50	50	ENSMUST00000068156.8	ENSMUSG00000046230.12	Vps13a	chr19	protein_coding	vacuolar protein sorting 13A
chr19	16638489	16638655	-	16638489	16641116	A5SS	0.5	50	50	ENSMUST00000068156.8	ENSMUSG00000046230.12	Vps13a	chr19	protein_coding	vacuolar protein sorting 13A
chr19	16720422	16722188	-	16720422	16722150	A5SS	0.33	50	50	ENSMUST00000068156.8	ENSMUSG00000046230.12	Vps13a	chr19	protein_coding	vacuolar protein sorting 13A
chr19	16612957	16613133	-	16610526	16613133	A3SS	0.33	50	50	ENSMUST00000225899.3	ENSMUSG00000046230.12	Vps13a	chr19	protein_coding	vacuolar protein sorting 13A
chr19	16720422;16722321	16722188;16723025	-	16720422	16723025	cassetteExon	0.5	100	100	ENSMUST00000223846.2	ENSMUSG00000046230.12	Vps13a	chr19	protein_coding	vacuolar protein sorting 13A
chr19	16897112	16902169	+	16849423	16902169	A5SS	0.33	50	50	ENSMUST00000235177.2	ENSMUSG00000118126.2	Gm32341	chr19	lncRNA	predicted gene, 32341
chr19	16898857	16902169	+	16849423	16902169	A5SS	0.33	50	50	ENSMUST00000235177.2	ENSMUSG00000118126.2	Gm32341	chr19	lncRNA	predicted gene, 32341
chr19	16897112;16898857	16898743;16902169	+	16897112	16902169	cassetteExon	0.5	100	100	ENSMUST00000235214.2	ENSMUSG00000118126.2	Gm32341	chr19	lncRNA	predicted gene, 32341
chr19	16998017	17090951	+	16998017	17032154	3pMXE	0.5	50	50	ENSMUST00000224145.2	ENSMUSG00000039126.11	Prune2	chr19	protein_coding	prune homolog 2
chr19	17185693	17189656	+	17185693;17189077	17189042;17189656	ES	0.5	50	50	ENSMUST00000087689.5	ENSMUSG00000039126.11	Prune2	chr19	protein_coding	prune homolog 2
chr19	17114255	17145627	+	17103067	17145627	A5SS	0.33	50	50	ENSMUST00000087689.5	ENSMUSG00000039126.11	Prune2	chr19	protein_coding	prune homolog 2
chr19	17116192	17145627	+	17103067	17145627	A5SS	0.33	50	50	ENSMUST00000087689.5	ENSMUSG00000039126.11	Prune2	chr19	protein_coding	prune homolog 2
chr19	17185693	17189042	+	17185693	17198148	A3SS	0.33	50	50	ENSMUST00000226052.2	ENSMUSG00000039126.11	Prune2	chr19	protein_coding	prune homolog 2
chr19	17185693	17189656	+	17185693	17198148	A3SS	0.33	50	50	ENSMUST00000226052.2	ENSMUSG00000039126.11	Prune2	chr19	protein_coding	prune homolog 2
chr19	17193737	17198148	+	17185693	17198148	A5SS	0.5	50	50	ENSMUST00000226052.2	ENSMUSG00000039126.11	Prune2	chr19	protein_coding	prune homolog 2
chr19	17116192	17145627	+	17114255	17145627	A5SS	0.33	50	50	ENSMUST00000223920.2	ENSMUSG00000039126.11	Prune2	chr19	protein_coding	prune homolog 2
chr19	17229033	17229229	-	17222620	17229229	A3SS	0.5	50	50	ENSMUST00000236272.2	ENSMUSG00000118367.2	Gm50277	chr19	lncRNA	predicted gene, 50277
chr19	17310620	17350130	-	17310620	17333921	5pMXE	0.25	50	50	ENSMUST00000174236.8	ENSMUSG00000038843.19	Gcnt1	chr19	protein_coding	glucosaminyl (N-acetyl) transferase 1, core 2
chr19	17310620	17312691	-	17310620	17333921	A5SS	0.25	50	50	ENSMUST00000174236.8	ENSMUSG00000038843.19	Gcnt1	chr19	protein_coding	glucosaminyl (N-acetyl) transferase 1, core 2
chr19	17310620	17316832	-	17310620	17333921	A5SS	0.25	50	50	ENSMUST00000174236.8	ENSMUSG00000038843.19	Gcnt1	chr19	protein_coding	glucosaminyl (N-acetyl) transferase 1, core 2
chr19	17310620	17350130	-	17310620	17316832	5pMXE	0.25	50	50	ENSMUST00000169897.2	ENSMUSG00000038843.19	Gcnt1	chr19	protein_coding	glucosaminyl (N-acetyl) transferase 1, core 2
chr19	17310620	17312691	-	17310620	17316832	A5SS	0.25	50	50	ENSMUST00000169897.2	ENSMUSG00000038843.19	Gcnt1	chr19	protein_coding	glucosaminyl (N-acetyl) transferase 1, core 2
chr19	17310620	17312691	-	17310620	17350130	A5SS	0.25	50	50	ENSMUST00000236139.2	ENSMUSG00000038843.19	Gcnt1	chr19	protein_coding	glucosaminyl (N-acetyl) transferase 1, core 2
chr19	17371983	17372562	+	17371756	17372562	A5SS	0.5	50	50	ENSMUST00000025617.4	ENSMUSG00000024712.10	Rfk	chr19	protein_coding	riboflavin kinase
chr19	17374869	17375942	+	17372713	17375942	A5SS	0.5	50	50	ENSMUST00000025617.4	ENSMUSG00000024712.10	Rfk	chr19	protein_coding	riboflavin kinase
chr19	17573142	17619857	-	17573142;17595118	17595015;17619857	ES	0.5	50	50	ENSMUST00000025618.16	ENSMUSG00000024713.17	Pcsk5	chr19	protein_coding	proprotein convertase subtilisin/kexin type 5
chr19	17538193	17541146	-	17502678	17541146	A3SS	0.5	50	50	ENSMUST00000025618.16	ENSMUSG00000024713.17	Pcsk5	chr19	protein_coding	proprotein convertase subtilisin/kexin type 5
chr19	17649363	17652785	-	17632264	17652785	A3SS	0.5	50	50	ENSMUST00000025618.16	ENSMUSG00000024713.17	Pcsk5	chr19	protein_coding	proprotein convertase subtilisin/kexin type 5
chr19	18573765;18576353	18576277;18581530	-	18573765	18581530	cassetteExon	0.5	100	100	ENSMUST00000236615.2	ENSMUSG00000024725.14	Ostf1	chr19	protein_coding	osteoclast stimulating factor 1
chr19	18558692	18562006	-	18494739	18562006	A3SS	0.5	50	50	ENSMUST00000236615.2	ENSMUSG00000024725.14	Ostf1	chr19	protein_coding	osteoclast stimulating factor 1
chr19	18609445	18613443	+	18609363	18613443	A5SS	0.5	50	50	ENSMUST00000159061.8	ENSMUSG00000037847.15	Nmrk1	chr19	protein_coding	nicotinamide riboside kinase 1
chr19	18613506;18616763	18616282;18616882	+	18613506	18616882	cassetteExon	0.5	100	100	ENSMUST00000042392.14	ENSMUSG00000037847.15	Nmrk1	chr19	protein_coding	nicotinamide riboside kinase 1
chr19	18622502;18623385	18623276;18628600	+	18622502	18628600	cassetteExon	0.5	100	100	ENSMUST00000042392.14	ENSMUSG00000037847.15	Nmrk1	chr19	protein_coding	nicotinamide riboside kinase 1
chr19	18648799	18655052	+	18648566	18655052	A5SS	0.33	50	50	ENSMUST00000025632.11	ENSMUSG00000024726.11	Carnmt1	chr19	protein_coding	carnosine N-methyltransferase 1
chr19	18648855	18655052	+	18648566	18655052	A5SS	0.33	50	50	ENSMUST00000025632.11	ENSMUSG00000024726.11	Carnmt1	chr19	protein_coding	carnosine N-methyltransferase 1
chr19	18648799	18655052	+	18648855	18655052	A5SS	0.33	50	50	ENSMUST00000235736.2	ENSMUSG00000024726.11	Carnmt1	chr19	protein_coding	carnosine N-methyltransferase 1
chr19	18691023	18694586	+	18691023	18694583	A3SS	0.5	50	50	ENSMUST00000062753.3	ENSMUSG00000047044.8	D030056L22Rik	chr19	protein_coding	RIKEN cDNA D030056L22 gene
chr19	18800843	18803155	+	18800843	18803115	A3SS	0.5	50	50	ENSMUST00000040489.9	ENSMUSG00000024727.10	Trpm6	chr19	protein_coding	transient receptor potential cation channel, subfamily M, member 6
chr19	18736046	18749685	+	18727406	18749685	A5SS	0.5	50	50	ENSMUST00000040489.9	ENSMUSG00000024727.10	Trpm6	chr19	protein_coding	transient receptor potential cation channel, subfamily M, member 6
chr19	18818206	18830691	+	18815469	18830691	A5SS	0.5	50	50	ENSMUST00000040489.9	ENSMUSG00000024727.10	Trpm6	chr19	protein_coding	transient receptor potential cation channel, subfamily M, member 6
chr19	18965480	19087916	-	18965480	18978371	5pMXE	0.33	50	50	ENSMUST00000040153.15	ENSMUSG00000036192.16	Rorb	chr19	protein_coding	RAR-related orphan receptor beta
chr19	18965480;18971684	18971632;18978371	-	18965480	18978371	cassetteExon	0.5	100	100	ENSMUST00000040153.15	ENSMUSG00000036192.16	Rorb	chr19	protein_coding	RAR-related orphan receptor beta
chr19	18965480	18971632	-	18965480	19087916	A5SS	0.33	50	50	ENSMUST00000112832.8	ENSMUSG00000036192.16	Rorb	chr19	protein_coding	RAR-related orphan receptor beta
chr19	19221623	19223001	-	19221623	19223045	A5SS	0.5	50	50	ENSMUST00000237413.2	ENSMUSG00000117909.2	Gm50212	chr19	lncRNA	predicted gene, 50212
chr19	19291984	19295201	+	19291984	19296863	A3SS	0.5	50	50	ENSMUST00000236214.2	ENSMUSG00000118109.2	Gm41815	chr19	lncRNA	predicted gene, 41815
chr19	20400085	20413434	+	20400085;20411494	20411260;20413434	ES	0.5	50	50	ENSMUST00000235940.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20413877	20422090	+	20413877	20417903	3pMXE	0.33	50	50	ENSMUST00000235940.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20302316;20302436	20302387;20397350	+	20302316	20397350	cassetteExon	0.5	100	100	ENSMUST00000235940.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20302316;20388679	20388616;20397350	+	20302316	20397350	cassetteExon	0.5	100	100	ENSMUST00000235940.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20302316;20388679	20388616;20398440	+	20302316;20397482	20397350;20398440	MXE	0.5	100	100	ENSMUST00000235940.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20400085	20411249	+	20400085	20411260	A3SS	0.25	50	50	ENSMUST00000235940.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20413877	20415953	+	20413877	20417903	A3SS	0.33	50	50	ENSMUST00000235940.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20382714	20397350	+	20302316	20397350	A5SS	0.2	50	50	ENSMUST00000235940.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20382714	20398440	+	20397482	20398440	A5SS&ES	0.33	50	50	ENSMUST00000235940.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20394686	20397350	+	20302316	20397350	A5SS	0.2	50	50	ENSMUST00000235940.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20413801	20417903	+	20413877	20417903	A5SS	0.5	50	50	ENSMUST00000235940.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20400085	20413656	+	20400085;20413507	20413434;20413656	ES	0.5	50	50	ENSMUST00000235137.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20400085;20411494	20411249;20413434	+	20400085	20413434	cassetteExon	0.5	100	100	ENSMUST00000235137.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20413877;20418093	20417903;20422090	+	20413877	20422090	cassetteExon	0.5	100	100	ENSMUST00000235137.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20413877	20415953	+	20413877	20422090	A3SS	0.33	50	50	ENSMUST00000235137.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20413801	20422090	+	20413877	20422090	A5SS	0.25	50	50	ENSMUST00000235137.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20413801	20422090	+	20413801	20417903	3pMXE	0.5	50	50	ENSMUST00000236064.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20388679	20398440	+	20388679;20397482	20397350;20398440	ES	0.33	50	50	ENSMUST00000235141.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20302316;20302436	20302387;20397350	+	20302316;20388679	20388616;20397350	MXE	0.5	100	100	ENSMUST00000235141.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20382714	20397350	+	20388679	20397350	A5SS&ES	0.2	50	50	ENSMUST00000235141.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20394686	20397350	+	20388679	20397350	A5SS	0.2	50	50	ENSMUST00000235141.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20413801	20422090	+	20418093	20422090	A5SS&ES	0.25	50	50	ENSMUST00000235141.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20302316;20388679	20388616;20398440	+	20302316;20397482	20302387;20398440	MXE	0.5	100	100	ENSMUST00000236291.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20400085	20411249	+	20400085	20413656	A3SS	0.25	50	50	ENSMUST00000236291.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20400085	20411260	+	20400085	20413656	A3SS	0.25	50	50	ENSMUST00000236291.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20382714	20397350	+	20302436	20397350	A5SS	0.2	50	50	ENSMUST00000236291.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20394686	20397350	+	20302436	20397350	A5SS	0.2	50	50	ENSMUST00000236291.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20382714;20397482	20397350;20398440	+	20382714	20398440	cassetteExon	0.5	100	100	ENSMUST00000238187.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20400085;20413801	20413434;20422090	+	20400085	20422090	cassetteExon	0.5	100	100	ENSMUST00000238187.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20400085;20413877	20413434;20422090	+	20400085	20422090	cassetteExon	0.5	100	100	ENSMUST00000238187.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20400085;20413801	20413656;20422090	+	20400085	20422090	cassetteExon	0.5	100	100	ENSMUST00000238187.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20400085;20413877	20413656;20422090	+	20400085	20422090	cassetteExon	0.5	100	100	ENSMUST00000238187.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20400085	20411249	+	20400085	20422090	A3SS	0.2	50	50	ENSMUST00000238187.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20400085	20411260	+	20400085	20422090	A3SS	0.2	50	50	ENSMUST00000238187.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20388679	20398440	+	20382714	20398440	A5SS	0.33	50	50	ENSMUST00000238187.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20418093	20422090	+	20400085	20422090	A5SS	0.25	50	50	ENSMUST00000238187.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20388679	20398440	+	20397482	20398440	A5SS&ES	0.33	50	50	ENSMUST00000235283.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20394686	20397350	+	20382714	20397350	A5SS	0.2	50	50	ENSMUST00000235283.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20413801;20418093	20417903;20422090	+	20413801	20422090	cassetteExon	0.5	100	100	ENSMUST00000237182.2	ENSMUSG00000094732.3	1500015L24Rik	chr19	lncRNA	RIKEN cDNA 1500015L24 gene
chr19	20362136	20367976	-	20362136;20366057	20365839;20367976	ES	0.5	50	50	ENSMUST00000235280.2	ENSMUSG00000024659.16	Anxa1	chr19	protein_coding	annexin A1
chr19	20352711;20353909	20353826;20354016	-	20352711	20354016	cassetteExon	0.5	100	100	ENSMUST00000235280.2	ENSMUSG00000024659.16	Anxa1	chr19	protein_coding	annexin A1
chr19	20361943	20362057	-	20361947	20362057	A3SS	0.5	50	50	ENSMUST00000235280.2	ENSMUSG00000024659.16	Anxa1	chr19	protein_coding	annexin A1
chr19	20514592	20516241	-	20412269	20516241	A3SS	0.5	50	50	ENSMUST00000235626.2	ENSMUSG00000114469.3	C730002L08Rik	chr19	lncRNA	RIKEN cDNA C730002L08 gene
chr19	20516311	20529551	-	20516311	20517539	5pMXE	0.5	50	50	ENSMUST00000236998.2	ENSMUSG00000114469.3	C730002L08Rik	chr19	lncRNA	RIKEN cDNA C730002L08 gene
chr19	20530564	20537128	+	20530564	20533029	3pMXE	0.33	50	50	ENSMUST00000224807.2	ENSMUSG00000053279.9	Aldh1a1	chr19	protein_coding	aldehyde dehydrogenase family 1, subfamily A1
chr19	20530564	20579362	+	20530564	20533029	3pMXE	0.33	50	50	ENSMUST00000224807.2	ENSMUSG00000053279.9	Aldh1a1	chr19	protein_coding	aldehyde dehydrogenase family 1, subfamily A1
chr19	20470888	20518424	+	20470888	20530463	A3SS	0.5	50	50	ENSMUST00000224807.2	ENSMUSG00000053279.9	Aldh1a1	chr19	protein_coding	aldehyde dehydrogenase family 1, subfamily A1
chr19	20530564;20537228	20537128;20579362	+	20530564	20579362	cassetteExon	0.5	100	100	ENSMUST00000225337.3	ENSMUSG00000053279.9	Aldh1a1	chr19	protein_coding	aldehyde dehydrogenase family 1, subfamily A1
chr19	20537228	20542585	+	20537228	20579362	A3SS	0.5	50	50	ENSMUST00000225313.2	ENSMUSG00000053279.9	Aldh1a1	chr19	protein_coding	aldehyde dehydrogenase family 1, subfamily A1
chr19	20782030	20793474	-	20782030	20791824	5pMXE	0.5	50	50	ENSMUST00000236437.2	ENSMUSG00000024749.10	Tmc1	chr19	protein_coding	transmembrane channel-like gene family 1
chr19	21082116	21082357	+	21082116	21082354	A3SS	0.5	50	50	ENSMUST00000237543.2	ENSMUSG00000118047.2	4930554I06Rik	chr19	lncRNA	RIKEN cDNA 4930554I06 gene
chr19	21142748	21163781	-	21142748	21148042	5pMXE	0.5	50	50	ENSMUST00000237231.2	ENSMUSG00000118086.2	Gm52981	chr19	lncRNA	predicted gene, 52981
chr19	21140343	21142595	-	21102016	21142595	A3SS	0.5	50	50	ENSMUST00000237231.2	ENSMUSG00000118086.2	Gm52981	chr19	lncRNA	predicted gene, 52981
chr19	21152608	21163781	-	21142748	21163781	A3SS	0.5	50	50	ENSMUST00000235456.2	ENSMUSG00000118086.2	Gm52981	chr19	lncRNA	predicted gene, 52981
chr19	21182357	21185754	-	21182357	21225711	A5SS	0.5	50	50	ENSMUST00000235456.2	ENSMUSG00000118086.2	Gm52981	chr19	lncRNA	predicted gene, 52981
chr19	21254453	21256989	+	21254453;21255122	21255019;21256989	ES	0.5	50	50	ENSMUST00000237651.2	ENSMUSG00000024750.12	Zfand5	chr19	protein_coding	zinc finger, AN1-type domain 5
chr19	21250706	21253790	+	21250106	21253790	A5SS	0.5	50	50	ENSMUST00000237651.2	ENSMUSG00000024750.12	Zfand5	chr19	protein_coding	zinc finger, AN1-type domain 5
chr19	21411673	21450752	-	21411673	21449732	5pMXE	0.33	50	50	ENSMUST00000087600.10	ENSMUSG00000058624.14	Gda	chr19	protein_coding	guanine deaminase
chr19	21411673	21418124	-	21411673	21449732	A5SS	0.33	50	50	ENSMUST00000087600.10	ENSMUSG00000058624.14	Gda	chr19	protein_coding	guanine deaminase
chr19	21411673	21450752	-	21411673	21418124	5pMXE	0.33	50	50	ENSMUST00000237823.2	ENSMUSG00000058624.14	Gda	chr19	protein_coding	guanine deaminase
chr19	21530356	21533075	+	21530356	21533047	A3SS	0.5	50	50	ENSMUST00000236172.2	ENSMUSG00000079382.4	Gm3443	chr19	transcribed_unitary_pseudogene	predicted gene 3443
chr19	21576232	21629971	-	21567990	21629971	A3SS	0.2	50	50	ENSMUST00000177577.2	ENSMUSG00000035171.10	1110059E24Rik	chr19	protein_coding	RIKEN cDNA 1110059E24 gene
chr19	21592809	21629971	-	21567990	21629971	A3SS	0.2	50	50	ENSMUST00000177577.2	ENSMUSG00000035171.10	1110059E24Rik	chr19	protein_coding	RIKEN cDNA 1110059E24 gene
chr19	21596579	21629971	-	21567990	21629971	A3SS	0.2	50	50	ENSMUST00000177577.2	ENSMUSG00000035171.10	1110059E24Rik	chr19	protein_coding	RIKEN cDNA 1110059E24 gene
chr19	21608160	21629971	-	21567990	21629971	A3SS	0.2	50	50	ENSMUST00000177577.2	ENSMUSG00000035171.10	1110059E24Rik	chr19	protein_coding	RIKEN cDNA 1110059E24 gene
chr19	21576232	21629971	-	21576232;21596579	21596473;21629971	ES	0.25	50	50	ENSMUST00000038830.10	ENSMUSG00000035171.10	1110059E24Rik	chr19	protein_coding	RIKEN cDNA 1110059E24 gene
chr19	21576232;21608160	21607874;21629971	-	21576232;21596579	21596473;21629971	MXE	0.5	100	100	ENSMUST00000038830.10	ENSMUSG00000035171.10	1110059E24Rik	chr19	protein_coding	RIKEN cDNA 1110059E24 gene
chr19	21596579;21608160	21607874;21629971	-	21596579	21629971	cassetteExon	0.5	100	100	ENSMUST00000038830.10	ENSMUSG00000035171.10	1110059E24Rik	chr19	protein_coding	RIKEN cDNA 1110059E24 gene
chr19	21592809	21596473	-	21576232	21596473	A3SS	0.5	50	50	ENSMUST00000038830.10	ENSMUSG00000035171.10	1110059E24Rik	chr19	protein_coding	RIKEN cDNA 1110059E24 gene
chr19	21592809	21629971	-	21596579	21629971	A3SS&ES	0.25	50	50	ENSMUST00000038830.10	ENSMUSG00000035171.10	1110059E24Rik	chr19	protein_coding	RIKEN cDNA 1110059E24 gene
chr19	21576232	21581653	-	21576232	21596473	A5SS	0.2	50	50	ENSMUST00000038830.10	ENSMUSG00000035171.10	1110059E24Rik	chr19	protein_coding	RIKEN cDNA 1110059E24 gene
chr19	21576232	21587970	-	21576232	21596473	A5SS	0.2	50	50	ENSMUST00000038830.10	ENSMUSG00000035171.10	1110059E24Rik	chr19	protein_coding	RIKEN cDNA 1110059E24 gene
chr19	21576232;21608160	21607874;21629971	-	21576232	21629971	cassetteExon	0.5	100	100	ENSMUST00000179553.2	ENSMUSG00000035171.10	1110059E24Rik	chr19	protein_coding	RIKEN cDNA 1110059E24 gene
chr19	21592809	21629971	-	21576232	21629971	A3SS	0.25	50	50	ENSMUST00000179553.2	ENSMUSG00000035171.10	1110059E24Rik	chr19	protein_coding	RIKEN cDNA 1110059E24 gene
chr19	21576232	21581653	-	21576232	21629971	A5SS	0.2	50	50	ENSMUST00000179553.2	ENSMUSG00000035171.10	1110059E24Rik	chr19	protein_coding	RIKEN cDNA 1110059E24 gene
chr19	21576232	21587970	-	21576232	21629971	A5SS	0.2	50	50	ENSMUST00000179553.2	ENSMUSG00000035171.10	1110059E24Rik	chr19	protein_coding	RIKEN cDNA 1110059E24 gene
chr19	21576232	21629971	-	21576232	21607874	5pMXE	0.2	50	50	ENSMUST00000178012.2	ENSMUSG00000035171.10	1110059E24Rik	chr19	protein_coding	RIKEN cDNA 1110059E24 gene
chr19	21576232;21596579	21596473;21607874	-	21576232	21607874	cassetteExon	0.5	100	100	ENSMUST00000178012.2	ENSMUSG00000035171.10	1110059E24Rik	chr19	protein_coding	RIKEN cDNA 1110059E24 gene
chr19	21576232	21581653	-	21576232	21607874	A5SS	0.2	50	50	ENSMUST00000178012.2	ENSMUSG00000035171.10	1110059E24Rik	chr19	protein_coding	RIKEN cDNA 1110059E24 gene
chr19	21576232	21587970	-	21576232	21607874	A5SS	0.2	50	50	ENSMUST00000178012.2	ENSMUSG00000035171.10	1110059E24Rik	chr19	protein_coding	RIKEN cDNA 1110059E24 gene
chr19	21576232	21587970	-	21576232	21581653	5pMXE	0.2	50	50	ENSMUST00000177605.2	ENSMUSG00000035171.10	1110059E24Rik	chr19	protein_coding	RIKEN cDNA 1110059E24 gene
chr19	21592809;21596579	21596473;21629971	-	21592809	21629971	cassetteExon	0.5	100	100	ENSMUST00000178781.2	ENSMUSG00000035171.10	1110059E24Rik	chr19	protein_coding	RIKEN cDNA 1110059E24 gene
chr19	21608160	21629971	-	21592809	21629971	A3SS	0.2	50	50	ENSMUST00000178781.2	ENSMUSG00000035171.10	1110059E24Rik	chr19	protein_coding	RIKEN cDNA 1110059E24 gene
chr19	21656186	21658232	+	21656186	21658354	A3SS	0.5	50	50	ENSMUST00000235332.2	ENSMUSG00000047368.5	Abhd17b	chr19	protein_coding	abhydrolase domain containing 17B
chr19	21756150	21770002	+	21756150;21757616	21757535;21770002	ES	0.5	50	50	ENSMUST00000096194.9	ENSMUSG00000024754.14	Cemip2	chr19	protein_coding	cell migration inducing hyaluronidase 2
chr19	22875174	22878410	+	22875174;22877527	22877498;22878410	ES	0.5	50	50	ENSMUST00000237357.2	ENSMUSG00000052387.17	Trpm3	chr19	protein_coding	transient receptor potential cation channel, subfamily M, member 3
chr19	22710535;22727209	22727135;22743998	+	22710535	22743998	cassetteExon	0.5	100	100	ENSMUST00000237357.2	ENSMUSG00000052387.17	Trpm3	chr19	protein_coding	transient receptor potential cation channel, subfamily M, member 3
chr19	22834114;22839276	22839167;22861248	+	22834114	22861248	cassetteExon	0.5	100	100	ENSMUST00000237357.2	ENSMUSG00000052387.17	Trpm3	chr19	protein_coding	transient receptor potential cation channel, subfamily M, member 3
chr19	22866808;22874883	22874848;22875034	+	22866808	22875034	cassetteExon	0.5	100	100	ENSMUST00000237357.2	ENSMUSG00000052387.17	Trpm3	chr19	protein_coding	transient receptor potential cation channel, subfamily M, member 3
chr19	22674865	22676157	+	22674865	22676093	A3SS	0.5	50	50	ENSMUST00000237357.2	ENSMUSG00000052387.17	Trpm3	chr19	protein_coding	transient receptor potential cation channel, subfamily M, member 3
chr19	22744172	22749322	+	22744172	22770695	A3SS	0.33	50	50	ENSMUST00000237357.2	ENSMUSG00000052387.17	Trpm3	chr19	protein_coding	transient receptor potential cation channel, subfamily M, member 3
chr19	22744172	22749893	+	22744172	22770695	A3SS	0.33	50	50	ENSMUST00000237357.2	ENSMUSG00000052387.17	Trpm3	chr19	protein_coding	transient receptor potential cation channel, subfamily M, member 3
chr19	22879580	22882037	+	22879580	22881999	A3SS	0.33	50	50	ENSMUST00000237357.2	ENSMUSG00000052387.17	Trpm3	chr19	protein_coding	transient receptor potential cation channel, subfamily M, member 3
chr19	22879580	22882080	+	22879580	22881999	A3SS	0.33	50	50	ENSMUST00000237357.2	ENSMUSG00000052387.17	Trpm3	chr19	protein_coding	transient receptor potential cation channel, subfamily M, member 3
chr19	22425823	22674786	+	22116665	22674786	A5SS	0.33	50	50	ENSMUST00000237357.2	ENSMUSG00000052387.17	Trpm3	chr19	protein_coding	transient receptor potential cation channel, subfamily M, member 3
chr19	22670215	22674786	+	22116665	22674786	A5SS	0.33	50	50	ENSMUST00000237357.2	ENSMUSG00000052387.17	Trpm3	chr19	protein_coding	transient receptor potential cation channel, subfamily M, member 3
chr19	22862792	22866758	+	22862846	22866758	A5SS	0.5	50	50	ENSMUST00000237357.2	ENSMUSG00000052387.17	Trpm3	chr19	protein_coding	transient receptor potential cation channel, subfamily M, member 3
chr19	22903470	22955656	+	22903434	22955656	A5SS	0.5	50	50	ENSMUST00000237357.2	ENSMUSG00000052387.17	Trpm3	chr19	protein_coding	transient receptor potential cation channel, subfamily M, member 3
chr19	22670215	22674786	+	22425823	22674786	A5SS	0.33	50	50	ENSMUST00000235522.2	ENSMUSG00000052387.17	Trpm3	chr19	protein_coding	transient receptor potential cation channel, subfamily M, member 3
chr19	22879580	22882080	+	22879580	22882037	A3SS	0.33	50	50	ENSMUST00000238159.2	ENSMUSG00000052387.17	Trpm3	chr19	protein_coding	transient receptor potential cation channel, subfamily M, member 3
chr19	22744172	22749893	+	22744172	22749322	3pMXE	0.33	50	50	ENSMUST00000099566.5	ENSMUSG00000052387.17	Trpm3	chr19	protein_coding	transient receptor potential cation channel, subfamily M, member 3
chr19	22416101;22424055	22423987;22425342	-	22416101	22425342	cassetteExon	0.5	100	100	ENSMUST00000183473.2	ENSMUSG00000098739.2	Gm27151	chr19	lncRNA	predicted gene 27151
chr19	23041807	23053121	-	22956241	23053121	A3SS	0.5	50	50	ENSMUST00000236056.2	ENSMUSG00000097930.3	C330002G04Rik	chr19	lncRNA	RIKEN cDNA C330002G04 gene
chr19	23039431;23040281	23040138;23040642	+	23039431	23040642	cassetteExon	0.5	100	100	ENSMUST00000237212.2	ENSMUSG00000118155.2	Gm50136	chr19	lncRNA	predicted gene, 50136
chr19	23039482	23040138	+	23039431	23040138	A5SS	0.5	50	50	ENSMUST00000235884.2	ENSMUSG00000118155.2	Gm50136	chr19	lncRNA	predicted gene, 50136
chr19	23121336	23142047	+	23119623	23142047	A5SS	0.5	50	50	ENSMUST00000036884.3	ENSMUSG00000033863.3	Klf9	chr19	protein_coding	Kruppel-like factor 9
chr19	23192104	23195769	-	23192104;23192563	23192519;23195769	ES	0.5	50	50	ENSMUST00000087556.7	ENSMUSG00000024943.10	Smc5	chr19	protein_coding	structural maintenance of chromosomes 5
chr19	23191534	23192006	-	23191534	23192009	A5SS	0.5	50	50	ENSMUST00000087556.7	ENSMUSG00000024943.10	Smc5	chr19	protein_coding	structural maintenance of chromosomes 5
chr19	23246232	23249871	-	23246232	23250998	A5SS	0.5	50	50	ENSMUST00000087556.7	ENSMUSG00000024943.10	Smc5	chr19	protein_coding	structural maintenance of chromosomes 5
chr19	23192104	23195769	-	23192104	23192519	5pMXE	0.5	50	50	ENSMUST00000224441.2	ENSMUSG00000024943.10	Smc5	chr19	protein_coding	structural maintenance of chromosomes 5
chr19	23336607	23351282	-	23336607;23341330	23341074;23351282	ES	0.5	50	50	ENSMUST00000036069.8	ENSMUSG00000033207.8	Mamdc2	chr19	protein_coding	MAM domain containing 2
chr19	23686331	23697422	+	23686331;23695466	23695177;23697422	ES	0.5	50	50	ENSMUST00000237333.2	ENSMUSG00000074925.5	Ptar1	chr19	protein_coding	protein prenyltransferase alpha subunit repeat containing 1
chr19	23664909	23686244	+	23664909	23671685	A3SS&ES	0.5	50	50	ENSMUST00000237333.2	ENSMUSG00000074925.5	Ptar1	chr19	protein_coding	protein prenyltransferase alpha subunit repeat containing 1
chr19	23665318	23671685	+	23664909	23671685	A5SS	0.5	50	50	ENSMUST00000237333.2	ENSMUSG00000074925.5	Ptar1	chr19	protein_coding	protein prenyltransferase alpha subunit repeat containing 1
chr19	23882085	23889819	+	23871384	23889819	A5SS	0.5	50	50	ENSMUST00000025830.9	ENSMUSG00000024897.10	Apba1	chr19	protein_coding	amyloid beta (A4) precursor protein binding, family  A, member 1
chr19	23953017	23953462	-	23953017	23955326	A5SS	0.5	50	50	ENSMUST00000096164.6	ENSMUSG00000071604.6	Fam189a2	chr19	protein_coding	family with sequence similarity 189, member A2
chr19	24116196	24171073	-	24116196	24151319	5pMXE	0.16	50	50	ENSMUST00000233027.2	ENSMUSG00000024812.12	Tjp2	chr19	protein_coding	tight junction protein 2
chr19	24116196	24202215	-	24116196	24151319	5pMXE	0.16	50	50	ENSMUST00000233027.2	ENSMUSG00000024812.12	Tjp2	chr19	protein_coding	tight junction protein 2
chr19	24072948	24073948	-	24072954	24073948	A3SS	0.5	50	50	ENSMUST00000233027.2	ENSMUSG00000024812.12	Tjp2	chr19	protein_coding	tight junction protein 2
chr19	24116196	24120147	-	24116196	24151319	A5SS	0.16	50	50	ENSMUST00000233027.2	ENSMUSG00000024812.12	Tjp2	chr19	protein_coding	tight junction protein 2
chr19	24116196	24124177	-	24116196	24151319	A5SS	0.16	50	50	ENSMUST00000233027.2	ENSMUSG00000024812.12	Tjp2	chr19	protein_coding	tight junction protein 2
chr19	24116196	24150270	-	24116196	24151319	A5SS	0.16	50	50	ENSMUST00000233027.2	ENSMUSG00000024812.12	Tjp2	chr19	protein_coding	tight junction protein 2
chr19	24171193	24202215	-	24171193	24177649	5pMXE	0.5	50	50	ENSMUST00000233658.3	ENSMUSG00000024812.12	Tjp2	chr19	protein_coding	tight junction protein 2
chr19	24116196	24120147	-	24116196	24171073	A5SS	0.2	50	50	ENSMUST00000233658.3	ENSMUSG00000024812.12	Tjp2	chr19	protein_coding	tight junction protein 2
chr19	24116196	24124177	-	24116196	24171073	A5SS	0.2	50	50	ENSMUST00000233658.3	ENSMUSG00000024812.12	Tjp2	chr19	protein_coding	tight junction protein 2
chr19	24116196	24150270	-	24116196	24171073	A5SS	0.2	50	50	ENSMUST00000233658.3	ENSMUSG00000024812.12	Tjp2	chr19	protein_coding	tight junction protein 2
chr19	24116196	24202215	-	24116196;24171193	24171073;24202215	ES	0.5	50	50	ENSMUST00000232956.2	ENSMUSG00000024812.12	Tjp2	chr19	protein_coding	tight junction protein 2
chr19	24116196	24120147	-	24116196	24202215	A5SS	0.16	50	50	ENSMUST00000099558.5	ENSMUSG00000024812.12	Tjp2	chr19	protein_coding	tight junction protein 2
chr19	24116196	24124177	-	24116196	24202215	A5SS	0.16	50	50	ENSMUST00000099558.5	ENSMUSG00000024812.12	Tjp2	chr19	protein_coding	tight junction protein 2
chr19	24116196	24150270	-	24116196	24202215	A5SS	0.16	50	50	ENSMUST00000099558.5	ENSMUSG00000024812.12	Tjp2	chr19	protein_coding	tight junction protein 2
chr19	24116196	24124177	-	24116196	24120147	5pMXE	0.16	50	50	ENSMUST00000236570.2	ENSMUSG00000024812.12	Tjp2	chr19	protein_coding	tight junction protein 2
chr19	24116196	24150270	-	24116196	24120147	5pMXE	0.16	50	50	ENSMUST00000236570.2	ENSMUSG00000024812.12	Tjp2	chr19	protein_coding	tight junction protein 2
chr19	24116196	24150270	-	24116196	24124177	5pMXE	0.16	50	50	ENSMUST00000237937.2	ENSMUSG00000024812.12	Tjp2	chr19	protein_coding	tight junction protein 2
chr19	24244763	24249668	-	24244763	24249711	A5SS	0.5	50	50	ENSMUST00000081333.11	ENSMUSG00000059363.11	Fxn	chr19	protein_coding	frataxin
chr19	24323745;24327653	24327498;24332482	-	24323745	24332482	cassetteExon	0.5	100	100	ENSMUST00000112673.9	ENSMUSG00000024867.15	Pip5k1b	chr19	protein_coding	phosphatidylinositol-4-phosphate 5-kinase, type 1 beta
chr19	24413032	24416417	-	24374510	24416417	A3SS	0.5	50	50	ENSMUST00000112673.9	ENSMUSG00000024867.15	Pip5k1b	chr19	protein_coding	phosphatidylinositol-4-phosphate 5-kinase, type 1 beta
chr19	24281510	24294383	-	24281510	24323601	A5SS	0.5	50	50	ENSMUST00000112673.9	ENSMUSG00000024867.15	Pip5k1b	chr19	protein_coding	phosphatidylinositol-4-phosphate 5-kinase, type 1 beta
chr19	24797609	24812107	-	24797609;24801802	24801656;24812107	ES	0.5	50	50	ENSMUST00000047666.5	ENSMUSG00000041731.14	Pgm5	chr19	protein_coding	phosphoglucomutase 5
chr19	24727844	24740352	-	24727844	24793022	A5SS	0.5	50	50	ENSMUST00000047666.5	ENSMUSG00000041731.14	Pgm5	chr19	protein_coding	phosphoglucomutase 5
chr19	24935354;24937882	24937703;24938748	-	24935354	24938748	cassetteExon	0.5	100	100	ENSMUST00000025815.10	ENSMUSG00000024878.10	Cbwd1	chr19	protein_coding	COBW domain containing 1
chr19	24900188	24901955	-	24900188	24905691	A5SS	0.5	50	50	ENSMUST00000025815.10	ENSMUSG00000024878.10	Cbwd1	chr19	protein_coding	COBW domain containing 1
chr19	24935354	24938681	-	24935354	24938748	A5SS	0.33	50	50	ENSMUST00000025815.10	ENSMUSG00000024878.10	Cbwd1	chr19	protein_coding	COBW domain containing 1
chr19	24935354	24938681	-	24935354	24937703	A5SS&ES	0.33	50	50	ENSMUST00000236250.2	ENSMUSG00000024878.10	Cbwd1	chr19	protein_coding	COBW domain containing 1
chr19	25042823	25044077	+	25042823	25055444	A3SS	0.5	50	50	ENSMUST00000025831.8	ENSMUSG00000052085.8	Dock8	chr19	protein_coding	dedicator of cytokinesis 8
chr19	25030002	25038472	+	25028953	25038472	A5SS	0.5	50	50	ENSMUST00000025831.8	ENSMUSG00000052085.8	Dock8	chr19	protein_coding	dedicator of cytokinesis 8
chr19	25372735	25386450	+	25355894	25386450	A5SS	0.33	50	50	ENSMUST00000049400.15	ENSMUSG00000032702.17	Kank1	chr19	protein_coding	KN motif and ankyrin repeat domains 1
chr19	25384397	25386450	+	25355894	25386450	A5SS	0.33	50	50	ENSMUST00000049400.15	ENSMUSG00000032702.17	Kank1	chr19	protein_coding	KN motif and ankyrin repeat domains 1
chr19	25384397	25386450	+	25372735	25386450	A5SS	0.33	50	50	ENSMUST00000137260.2	ENSMUSG00000032702.17	Kank1	chr19	protein_coding	KN motif and ankyrin repeat domains 1
chr19	25487227	25537231	+	25487227;25523466	25523183;25537231	ES	0.5	50	50	ENSMUST00000025755.11	ENSMUSG00000024837.16	Dmrt1	chr19	protein_coding	doublesex and mab-3 related transcription factor 1
chr19	25648905	25649442	-	25648809	25649442	A3SS	0.5	50	50	ENSMUST00000185211.2	ENSMUSG00000101089.2	2610016A17Rik	chr19	lncRNA	RIKEN cDNA 2610016A17 gene
chr19	26582633	26601281	+	26582633;26597344	26597084;26601281	ES	0.33	50	50	ENSMUST00000176769.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26656584	26661209	+	26656584;26659339	26659271;26661209	ES	0.33	50	50	ENSMUST00000176769.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26683631	26693515	+	26683631;26688085	26687858;26693515	ES	0.33	50	50	ENSMUST00000176769.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26729441	26748908	+	26729441;26748443	26748338;26748908	ES	0.33	50	50	ENSMUST00000176769.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26729441;26737331	26737278;26748338	+	26729441	26748338	cassetteExon	0.5	100	100	ENSMUST00000176769.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26729441;26737331	26737278;26748908	+	26729441;26748443	26748338;26748908	MXE	0.5	100	100	ENSMUST00000176769.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26729441;26737631	26737278;26748338	+	26729441	26748338	cassetteExon	0.5	100	100	ENSMUST00000176769.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26751705;26753353	26753252;26753501	+	26751705	26753501	cassetteExon	0.5	100	100	ENSMUST00000176769.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26584943	26597084	+	26582633	26597084	A5SS	0.5	50	50	ENSMUST00000176769.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26600976	26601281	+	26597344	26601281	A5SS	0.33	50	50	ENSMUST00000176769.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26658427	26659271	+	26656584	26659271	A5SS	0.5	50	50	ENSMUST00000176769.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26659513	26661209	+	26659339	26661209	A5SS	0.33	50	50	ENSMUST00000176769.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26693388	26693515	+	26688085	26693515	A5SS	0.33	50	50	ENSMUST00000176769.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26699622	26729224	+	26698347	26729224	A5SS	0.07	50	50	ENSMUST00000176769.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26707550	26729224	+	26698347	26729224	A5SS	0.07	50	50	ENSMUST00000176769.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26722709	26729224	+	26698347	26729224	A5SS	0.07	50	50	ENSMUST00000176769.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725205	26729224	+	26698347	26729224	A5SS	0.07	50	50	ENSMUST00000176769.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725698	26729224	+	26698347	26729224	A5SS	0.07	50	50	ENSMUST00000176769.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725903	26729224	+	26698347	26729224	A5SS	0.07	50	50	ENSMUST00000176769.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725937	26729224	+	26698347	26729224	A5SS	0.07	50	50	ENSMUST00000176769.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725944	26729224	+	26698347	26729224	A5SS	0.07	50	50	ENSMUST00000176769.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26726352	26729224	+	26698347	26729224	A5SS	0.07	50	50	ENSMUST00000176769.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26727342	26729224	+	26698347	26729224	A5SS	0.07	50	50	ENSMUST00000176769.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26727347	26729224	+	26698347	26729224	A5SS	0.07	50	50	ENSMUST00000176769.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26728108	26729224	+	26698347	26729224	A5SS	0.07	50	50	ENSMUST00000176769.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26728556	26729224	+	26698347	26729224	A5SS	0.07	50	50	ENSMUST00000176769.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26731166	26748338	+	26729441	26748338	A5SS	0.2	50	50	ENSMUST00000176769.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26748044	26748338	+	26729441	26748338	A5SS	0.2	50	50	ENSMUST00000176769.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26600976	26601281	+	26582633	26601281	A5SS	0.33	50	50	ENSMUST00000208163.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26656584	26661209	+	26656584;26659513	26659271;26661209	ES	0.33	50	50	ENSMUST00000025862.15	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26737331	26748908	+	26737331;26748443	26748338;26748908	ES	0.33	50	50	ENSMUST00000176030.8	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26737331;26737631	26737585;26748338	+	26737331	26748338	cassetteExon	0.5	100	100	ENSMUST00000176030.8	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26731166	26748338	+	26737331	26748338	A5SS&ES	0.2	50	50	ENSMUST00000176030.8	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26748044	26748338	+	26737331	26748338	A5SS	0.2	50	50	ENSMUST00000176030.8	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26729441	26748908	+	26729441;26737331	26737278;26748908	ES	0.33	50	50	ENSMUST00000099537.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26737331	26737585	+	26737331	26748908	A3SS	0.33	50	50	ENSMUST00000099537.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26683631	26693515	+	26683631	26687858	3pMXE	0.5	50	50	ENSMUST00000208378.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26693388	26693515	+	26683631	26693515	A5SS	0.33	50	50	ENSMUST00000208674.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26683631	26693515	+	26688085	26693515	5pMXE	0.33	50	50	ENSMUST00000176731.3	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26707550	26729224	+	26699622	26729224	A5SS	0.07	50	50	ENSMUST00000176494.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26722709	26729224	+	26699622	26729224	A5SS	0.07	50	50	ENSMUST00000176494.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725205	26729224	+	26699622	26729224	A5SS	0.07	50	50	ENSMUST00000176494.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725698	26729224	+	26699622	26729224	A5SS	0.07	50	50	ENSMUST00000176494.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725903	26729224	+	26699622	26729224	A5SS	0.07	50	50	ENSMUST00000176494.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725937	26729224	+	26699622	26729224	A5SS	0.07	50	50	ENSMUST00000176494.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725944	26729224	+	26699622	26729224	A5SS	0.07	50	50	ENSMUST00000176494.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26726352	26729224	+	26699622	26729224	A5SS	0.07	50	50	ENSMUST00000176494.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26727342	26729224	+	26699622	26729224	A5SS	0.07	50	50	ENSMUST00000176494.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26727347	26729224	+	26699622	26729224	A5SS	0.07	50	50	ENSMUST00000176494.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26728108	26729224	+	26699622	26729224	A5SS	0.07	50	50	ENSMUST00000176494.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26728556	26729224	+	26699622	26729224	A5SS	0.07	50	50	ENSMUST00000176494.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26722709	26729224	+	26707550	26729224	A5SS	0.07	50	50	ENSMUST00000207944.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725205	26729224	+	26707550	26729224	A5SS	0.07	50	50	ENSMUST00000207944.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725698	26729224	+	26707550	26729224	A5SS	0.07	50	50	ENSMUST00000207944.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725903	26729224	+	26707550	26729224	A5SS	0.07	50	50	ENSMUST00000207944.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725937	26729224	+	26707550	26729224	A5SS	0.07	50	50	ENSMUST00000207944.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725944	26729224	+	26707550	26729224	A5SS	0.07	50	50	ENSMUST00000207944.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26726352	26729224	+	26707550	26729224	A5SS	0.07	50	50	ENSMUST00000207944.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26727342	26729224	+	26707550	26729224	A5SS	0.07	50	50	ENSMUST00000207944.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26727347	26729224	+	26707550	26729224	A5SS	0.07	50	50	ENSMUST00000207944.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26728108	26729224	+	26707550	26729224	A5SS	0.07	50	50	ENSMUST00000207944.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26728556	26729224	+	26707550	26729224	A5SS	0.07	50	50	ENSMUST00000207944.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725205	26729224	+	26722709	26729224	A5SS	0.07	50	50	ENSMUST00000207418.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725698	26729224	+	26722709	26729224	A5SS	0.07	50	50	ENSMUST00000207418.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725903	26729224	+	26722709	26729224	A5SS	0.07	50	50	ENSMUST00000207418.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725937	26729224	+	26722709	26729224	A5SS	0.07	50	50	ENSMUST00000207418.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725944	26729224	+	26722709	26729224	A5SS	0.07	50	50	ENSMUST00000207418.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26726352	26729224	+	26722709	26729224	A5SS	0.07	50	50	ENSMUST00000207418.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26727342	26729224	+	26722709	26729224	A5SS	0.07	50	50	ENSMUST00000207418.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26727347	26729224	+	26722709	26729224	A5SS	0.07	50	50	ENSMUST00000207418.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26728108	26729224	+	26722709	26729224	A5SS	0.07	50	50	ENSMUST00000207418.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26728556	26729224	+	26722709	26729224	A5SS	0.07	50	50	ENSMUST00000207418.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725698	26729224	+	26725205	26729224	A5SS	0.07	50	50	ENSMUST00000208705.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725903	26729224	+	26725205	26729224	A5SS	0.07	50	50	ENSMUST00000208705.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725937	26729224	+	26725205	26729224	A5SS	0.07	50	50	ENSMUST00000208705.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725944	26729224	+	26725205	26729224	A5SS	0.07	50	50	ENSMUST00000208705.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26726352	26729224	+	26725205	26729224	A5SS	0.07	50	50	ENSMUST00000208705.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26727342	26729224	+	26725205	26729224	A5SS	0.07	50	50	ENSMUST00000208705.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26727347	26729224	+	26725205	26729224	A5SS	0.07	50	50	ENSMUST00000208705.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26728108	26729224	+	26725205	26729224	A5SS	0.07	50	50	ENSMUST00000208705.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26728556	26729224	+	26725205	26729224	A5SS	0.07	50	50	ENSMUST00000208705.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26727347;26728556	26728522;26729224	+	26727347	26729224	cassetteExon	0.5	100	100	ENSMUST00000207812.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725698	26729224	+	26727347	26729224	A5SS&ES	0.11	50	50	ENSMUST00000207812.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725846	26727252	+	26725740	26727252	A5SS	0.16	50	50	ENSMUST00000207812.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725903	26727252	+	26725740	26727252	A5SS	0.16	50	50	ENSMUST00000207812.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725903	26729224	+	26727347	26729224	A5SS&ES	0.11	50	50	ENSMUST00000207812.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725937	26727252	+	26725740	26727252	A5SS	0.16	50	50	ENSMUST00000207812.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725937	26729224	+	26727347	26729224	A5SS&ES	0.11	50	50	ENSMUST00000207812.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725944	26727252	+	26725740	26727252	A5SS	0.16	50	50	ENSMUST00000207812.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725944	26729224	+	26727347	26729224	A5SS&ES	0.11	50	50	ENSMUST00000207812.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26726352	26727252	+	26725740	26727252	A5SS	0.16	50	50	ENSMUST00000207812.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26726352	26729224	+	26727347	26729224	A5SS&ES	0.11	50	50	ENSMUST00000207812.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26727342	26729224	+	26727347	26729224	A5SS	0.11	50	50	ENSMUST00000207812.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26728108	26729224	+	26727347	26729224	A5SS	0.11	50	50	ENSMUST00000207812.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725903	26729224	+	26725698	26729224	A5SS	0.07	50	50	ENSMUST00000175791.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725937	26729224	+	26725698	26729224	A5SS	0.07	50	50	ENSMUST00000175791.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725944	26729224	+	26725698	26729224	A5SS	0.07	50	50	ENSMUST00000175791.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26726352	26729224	+	26725698	26729224	A5SS	0.07	50	50	ENSMUST00000175791.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26727342	26729224	+	26725698	26729224	A5SS	0.07	50	50	ENSMUST00000175791.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26728108	26729224	+	26725698	26729224	A5SS	0.07	50	50	ENSMUST00000175791.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26728556	26729224	+	26725698	26729224	A5SS	0.07	50	50	ENSMUST00000175791.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725944	26729224	+	26725944;26727347	26727252;26729224	ES	0.12	50	50	ENSMUST00000207118.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725846	26727252	+	26725944	26727252	A5SS	0.16	50	50	ENSMUST00000207118.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725903	26727252	+	26725944	26727252	A5SS	0.16	50	50	ENSMUST00000207118.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725937	26727252	+	26725944	26727252	A5SS	0.16	50	50	ENSMUST00000207118.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26726352	26727252	+	26725944	26727252	A5SS	0.16	50	50	ENSMUST00000207118.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725903	26729224	+	26725903;26727347	26727252;26729224	ES	0.12	50	50	ENSMUST00000209085.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725846	26727252	+	26725903	26727252	A5SS	0.16	50	50	ENSMUST00000209085.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725937	26727252	+	26725903	26727252	A5SS	0.16	50	50	ENSMUST00000209085.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26726352	26727252	+	26725903	26727252	A5SS	0.16	50	50	ENSMUST00000209085.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725903	26729224	+	26728556	26729224	A5SS&ES	0.12	50	50	ENSMUST00000208915.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725937	26728522	+	26727347	26728522	A5SS&ES	0.33	50	50	ENSMUST00000208915.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725937	26729224	+	26728556	26729224	A5SS&ES	0.12	50	50	ENSMUST00000208915.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26726352	26729224	+	26728556	26729224	A5SS&ES	0.12	50	50	ENSMUST00000208915.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26727342	26729224	+	26728556	26729224	A5SS&ES	0.12	50	50	ENSMUST00000208915.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26728108	26728522	+	26727347	26728522	A5SS	0.33	50	50	ENSMUST00000208915.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26728108	26729224	+	26728556	26729224	A5SS&ES	0.12	50	50	ENSMUST00000208915.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725937	26728522	+	26725937;26727347	26727252;26728522	ES	0.33	50	50	ENSMUST00000208541.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725846	26727252	+	26725937	26727252	A5SS	0.16	50	50	ENSMUST00000208541.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725944	26729224	+	26728556	26729224	A5SS&ES	0.12	50	50	ENSMUST00000208541.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26726352	26727252	+	26725937	26727252	A5SS	0.16	50	50	ENSMUST00000208541.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26726352	26729224	+	26726352;26727347	26727252;26729224	ES	0.12	50	50	ENSMUST00000207054.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725846	26727252	+	26726352	26727252	A5SS	0.16	50	50	ENSMUST00000207054.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725944;26727342	26727252;26729224	+	26725944	26729224	cassetteExon	0.5	100	100	ENSMUST00000208589.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725903	26729224	+	26725944	26729224	A5SS	0.07	50	50	ENSMUST00000208589.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725937	26729224	+	26725944	26729224	A5SS	0.07	50	50	ENSMUST00000208589.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26726352	26729224	+	26725944	26729224	A5SS	0.07	50	50	ENSMUST00000208589.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26728108	26729224	+	26725944	26729224	A5SS	0.07	50	50	ENSMUST00000208589.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725937	26729224	+	26725937;26727347	26727252;26729224	ES	0.12	50	50	ENSMUST00000176475.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725937;26728556	26728522;26729224	+	26725937;26727347	26727252;26729224	MXE	0.5	100	100	ENSMUST00000176475.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725937	26729224	+	26725937;26728556	26728522;26729224	ES	0.12	50	50	ENSMUST00000176698.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725937;26727342	26727252;26729224	+	26725937;26728556	26728522;26729224	MXE	0.5	100	100	ENSMUST00000176698.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26728108	26728522	+	26725937	26728522	A5SS	0.33	50	50	ENSMUST00000176698.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725903;26727342	26727252;26729224	+	26725903	26729224	cassetteExon	0.5	100	100	ENSMUST00000177252.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725937	26729224	+	26725903	26729224	A5SS	0.07	50	50	ENSMUST00000177252.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26726352	26729224	+	26725903	26729224	A5SS	0.07	50	50	ENSMUST00000177252.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26728108	26729224	+	26725903	26729224	A5SS	0.07	50	50	ENSMUST00000177252.9	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725937;26727342	26727252;26729224	+	26725937	26729224	cassetteExon	0.5	100	100	ENSMUST00000208712.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26726352	26729224	+	26725937	26729224	A5SS	0.07	50	50	ENSMUST00000208712.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26728108	26729224	+	26725937	26729224	A5SS	0.07	50	50	ENSMUST00000208712.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26726352;26727342	26727252;26729224	+	26726352	26729224	cassetteExon	0.5	100	100	ENSMUST00000208806.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26728108	26729224	+	26726352	26729224	A5SS	0.07	50	50	ENSMUST00000208806.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725903	26729224	+	26727342	26729224	5pMXE	0.07	50	50	ENSMUST00000208226.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725937	26729224	+	26727342	26729224	5pMXE	0.07	50	50	ENSMUST00000208226.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26725944	26729224	+	26727342	26729224	5pMXE	0.07	50	50	ENSMUST00000208226.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26726352	26729224	+	26727342	26729224	5pMXE	0.07	50	50	ENSMUST00000208226.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26728108	26729224	+	26727342	26729224	A5SS	0.07	50	50	ENSMUST00000208226.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26728108	26729224	+	26728108;26728556	26728522;26729224	ES	0.5	50	50	ENSMUST00000207380.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26727347	26729224	+	26728556	26729224	5pMXE	0.07	50	50	ENSMUST00000175953.3	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26731166	26748338	+	26737631	26748338	A5SS&ES	0.2	50	50	ENSMUST00000207535.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26748044	26748338	+	26737631	26748338	A5SS	0.2	50	50	ENSMUST00000207535.2	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26737331	26748908	+	26748443	26748908	A5SS&ES	0.5	50	50	ENSMUST00000177116.8	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26748044	26748338	+	26731166	26748338	A5SS	0.2	50	50	ENSMUST00000177116.8	ENSMUSG00000024921.18	Smarca2	chr19	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr19	26598789	26600006	-	26598789	26600130	A5SS	0.5	50	50	ENSMUST00000177262.2	ENSMUSG00000093628.2	Gm20616	chr19	lncRNA	predicted gene 20616
chr19	26863396	26863779	+	26863396	26863746	A3SS	0.5	50	50	ENSMUST00000235850.2	ENSMUSG00000074913.4	Gm815	chr19	protein_coding	predicted gene 815
chr19	27079531	27079974	-	27079531	27092638	A5SS	0.5	50	50	ENSMUST00000235490.2	ENSMUSG00000118209.2	Gm35438	chr19	lncRNA	predicted gene, 35438
chr19	27217141	27217866	+	27217141;27217370	27217245;27217866	ES	0.5	50	50	ENSMUST00000164509.8	ENSMUSG00000024924.15	Vldlr	chr19	protein_coding	very low density lipoprotein receptor
chr19	27212312;27213762	27213640;27215453	+	27212312	27215453	cassetteExon	0.5	100	100	ENSMUST00000164509.8	ENSMUSG00000024924.15	Vldlr	chr19	protein_coding	very low density lipoprotein receptor
chr19	27207715	27209120	+	27207715	27212190	A3SS	0.5	50	50	ENSMUST00000164509.8	ENSMUSG00000024924.15	Vldlr	chr19	protein_coding	very low density lipoprotein receptor
chr19	27218037	27218700	+	27218037	27218635	A3SS	0.5	50	50	ENSMUST00000164509.8	ENSMUSG00000024924.15	Vldlr	chr19	protein_coding	very low density lipoprotein receptor
chr19	27194532	27194943	+	27194348	27194943	A5SS	0.5	50	50	ENSMUST00000164509.8	ENSMUSG00000024924.15	Vldlr	chr19	protein_coding	very low density lipoprotein receptor
chr19	27223081;27224076	27223993;27224410	+	27223081	27224410	cassetteExon	0.5	100	100	ENSMUST00000172302.8	ENSMUSG00000024924.15	Vldlr	chr19	protein_coding	very low density lipoprotein receptor
chr19	27324945	27333652	+	27324945;27327710	27327660;27333652	ES	0.5	50	50	ENSMUST00000237751.2	ENSMUSG00000117752.2	Gm35554	chr19	lncRNA	predicted gene, 35554
chr19	27324945	27327660	+	27324945	27347646	A3SS	0.33	50	50	ENSMUST00000235573.2	ENSMUSG00000117752.2	Gm35554	chr19	lncRNA	predicted gene, 35554
chr19	27324945	27333652	+	27324945	27347646	A3SS	0.33	50	50	ENSMUST00000235573.2	ENSMUSG00000117752.2	Gm35554	chr19	lncRNA	predicted gene, 35554
chr19	27376500	27377079	-	27376504	27377079	A3SS	0.5	50	50	ENSMUST00000076219.6	ENSMUSG00000041360.9	Pum3	chr19	protein_coding	pumilio RNA-binding family member 3
chr19	27397517	27398697	-	27397521	27398697	A3SS	0.5	50	50	ENSMUST00000076219.6	ENSMUSG00000041360.9	Pum3	chr19	protein_coding	pumilio RNA-binding family member 3
chr19	27404528	27404796	-	27404528	27407192	A5SS	0.5	50	50	ENSMUST00000076219.6	ENSMUSG00000041360.9	Pum3	chr19	protein_coding	pumilio RNA-binding family member 3
chr19	27377221	27389582	-	27373782	27389582	A3SS	0.5	50	50	ENSMUST00000236585.2	ENSMUSG00000041360.9	Pum3	chr19	protein_coding	pumilio RNA-binding family member 3
chr19	27373782	27376282	-	27373782	27389582	A5SS	0.5	50	50	ENSMUST00000236585.2	ENSMUSG00000041360.9	Pum3	chr19	protein_coding	pumilio RNA-binding family member 3
chr19	27779879	27784193	-	27779879;27783742	27783588;27784193	ES	0.5	50	50	ENSMUST00000165566.8	ENSMUSG00000040929.18	Rfx3	chr19	protein_coding	regulatory factor X, 3 (influences HLA class II expression)
chr19	27808192	27827111	-	27808192;27814881	27814807;27827111	ES	0.5	50	50	ENSMUST00000165566.8	ENSMUSG00000040929.18	Rfx3	chr19	protein_coding	regulatory factor X, 3 (influences HLA class II expression)
chr19	27900666	27988372	-	27900666	27960254	5pMXE	0.5	50	50	ENSMUST00000165566.8	ENSMUSG00000040929.18	Rfx3	chr19	protein_coding	regulatory factor X, 3 (influences HLA class II expression)
chr19	27803552	27808053	-	27803552	27808011	A5SS	0.5	50	50	ENSMUST00000165566.8	ENSMUSG00000040929.18	Rfx3	chr19	protein_coding	regulatory factor X, 3 (influences HLA class II expression)
chr19	27808192	27814171	-	27808192	27814807	A5SS	0.33	50	50	ENSMUST00000165566.8	ENSMUSG00000040929.18	Rfx3	chr19	protein_coding	regulatory factor X, 3 (influences HLA class II expression)
chr19	27878303;27900666	27900608;27988372	-	27878303	27988372	cassetteExon	0.5	100	100	ENSMUST00000046898.17	ENSMUSG00000040929.18	Rfx3	chr19	protein_coding	regulatory factor X, 3 (influences HLA class II expression)
chr19	27960346	27988372	-	27878303	27988372	A3SS	0.33	50	50	ENSMUST00000046898.17	ENSMUSG00000040929.18	Rfx3	chr19	protein_coding	regulatory factor X, 3 (influences HLA class II expression)
chr19	27808192	27814171	-	27808192	27827111	A5SS	0.33	50	50	ENSMUST00000046898.17	ENSMUSG00000040929.18	Rfx3	chr19	protein_coding	regulatory factor X, 3 (influences HLA class II expression)
chr19	27878303	27988069	-	27878303	27988372	A5SS	0.33	50	50	ENSMUST00000046898.17	ENSMUSG00000040929.18	Rfx3	chr19	protein_coding	regulatory factor X, 3 (influences HLA class II expression)
chr19	27900666	27988372	-	27900666;27960346	27960254;27988372	ES	0.33	50	50	ENSMUST00000172907.8	ENSMUSG00000040929.18	Rfx3	chr19	protein_coding	regulatory factor X, 3 (influences HLA class II expression)
chr19	27878303	27988069	-	27878303	27900608	A5SS&ES	0.33	50	50	ENSMUST00000172907.8	ENSMUSG00000040929.18	Rfx3	chr19	protein_coding	regulatory factor X, 3 (influences HLA class II expression)
chr19	28509386	28643153	-	28509386;28517808	28517601;28643153	ES	0.5	50	50	ENSMUST00000162022.8	ENSMUSG00000052942.14	Glis3	chr19	protein_coding	GLIS family zinc finger 3
chr19	28327427	28331606	-	28294813	28331606	A3SS	0.5	50	50	ENSMUST00000162022.8	ENSMUSG00000052942.14	Glis3	chr19	protein_coding	GLIS family zinc finger 3
chr19	28276346	28277721	-	28276346	28294654	A5SS	0.5	50	50	ENSMUST00000162022.8	ENSMUSG00000052942.14	Glis3	chr19	protein_coding	GLIS family zinc finger 3
chr19	28294813	28303295	-	28294813	28331606	A5SS	0.5	50	50	ENSMUST00000162022.8	ENSMUSG00000052942.14	Glis3	chr19	protein_coding	GLIS family zinc finger 3
chr19	28643636	28655975	-	28643636	28656996	A5SS	0.5	50	50	ENSMUST00000162022.8	ENSMUSG00000052942.14	Glis3	chr19	protein_coding	GLIS family zinc finger 3
chr19	28509386	28643153	-	28509386	28517601	5pMXE	0.5	50	50	ENSMUST00000161026.2	ENSMUSG00000052942.14	Glis3	chr19	protein_coding	GLIS family zinc finger 3
chr19	28664154	28671405	+	28664154;28668158	28668087;28671405	ES	0.5	50	50	ENSMUST00000181393.8	ENSMUSG00000097735.8	D930032P07Rik	chr19	lncRNA	RIKEN cDNA D930032P07 gene
chr19	28671606;28694679	28694605;28696610	+	28671606	28696610	cassetteExon	0.5	100	100	ENSMUST00000181393.8	ENSMUSG00000097735.8	D930032P07Rik	chr19	lncRNA	RIKEN cDNA D930032P07 gene
chr19	28926143;28937128	28937080;28940936	-	28926143	28940936	cassetteExon	0.5	100	100	ENSMUST00000175647.8	ENSMUSG00000064202.16	Spata6l	chr19	protein_coding	spermatogenesis associated 6 like
chr19	28906032	28906525	-	28906032	28915632	A5SS	0.5	50	50	ENSMUST00000175647.8	ENSMUSG00000064202.16	Spata6l	chr19	protein_coding	spermatogenesis associated 6 like
chr19	28919214	28921633	-	28919214	28921624	A5SS	0.5	50	50	ENSMUST00000175647.8	ENSMUSG00000064202.16	Spata6l	chr19	protein_coding	spermatogenesis associated 6 like
chr19	28926143	28931490	-	28926143	28940936	A5SS	0.33	50	50	ENSMUST00000175647.8	ENSMUSG00000064202.16	Spata6l	chr19	protein_coding	spermatogenesis associated 6 like
chr19	28941073	28941167	-	28941073	28944994	A5SS	0.33	50	50	ENSMUST00000175647.8	ENSMUSG00000064202.16	Spata6l	chr19	protein_coding	spermatogenesis associated 6 like
chr19	28941073	28941221	-	28941073	28944994	A5SS	0.33	50	50	ENSMUST00000175647.8	ENSMUSG00000064202.16	Spata6l	chr19	protein_coding	spermatogenesis associated 6 like
chr19	28926143	28937080	-	28926143;28931531	28931490;28937080	ES	0.5	50	50	ENSMUST00000025872.13	ENSMUSG00000064202.16	Spata6l	chr19	protein_coding	spermatogenesis associated 6 like
chr19	28941073	28941167	-	28941073	28941221	A5SS	0.33	50	50	ENSMUST00000025872.13	ENSMUSG00000064202.16	Spata6l	chr19	protein_coding	spermatogenesis associated 6 like
chr19	28984487	28989289	+	28984487;28985095	28984973;28989289	ES	0.5	50	50	ENSMUST00000225310.2	ENSMUSG00000024780.8	Cdc37l1	chr19	protein_coding	cell division cycle 37-like 1
chr19	28989453	28993406	+	28989453	28990188	3pMXE	0.25	50	50	ENSMUST00000225310.2	ENSMUSG00000024780.8	Cdc37l1	chr19	protein_coding	cell division cycle 37-like 1
chr19	28989453	28993801	+	28989453	28990188	3pMXE	0.25	50	50	ENSMUST00000225310.2	ENSMUSG00000024780.8	Cdc37l1	chr19	protein_coding	cell division cycle 37-like 1
chr19	28989453	29002204	+	28989453	28990188	3pMXE	0.25	50	50	ENSMUST00000225310.2	ENSMUSG00000024780.8	Cdc37l1	chr19	protein_coding	cell division cycle 37-like 1
chr19	28989453	28993406	+	28989453	29002204	A3SS	0.25	50	50	ENSMUST00000224511.2	ENSMUSG00000024780.8	Cdc37l1	chr19	protein_coding	cell division cycle 37-like 1
chr19	28989453	28993801	+	28989453	29002204	A3SS	0.25	50	50	ENSMUST00000224511.2	ENSMUSG00000024780.8	Cdc37l1	chr19	protein_coding	cell division cycle 37-like 1
chr19	28984487	28989289	+	28984487	28984973	3pMXE	0.5	50	50	ENSMUST00000224599.2	ENSMUSG00000024780.8	Cdc37l1	chr19	protein_coding	cell division cycle 37-like 1
chr19	28989453	28993801	+	28989453	28993406	A3SS	0.25	50	50	ENSMUST00000050148.5	ENSMUSG00000024780.8	Cdc37l1	chr19	protein_coding	cell division cycle 37-like 1
chr19	28991353	28993406	+	28989453	28993406	A5SS	0.5	50	50	ENSMUST00000050148.5	ENSMUSG00000024780.8	Cdc37l1	chr19	protein_coding	cell division cycle 37-like 1
chr19	29111903	29120547	+	29111903	29120542	A3SS	0.5	50	50	ENSMUST00000064393.6	ENSMUSG00000024785.8	Rcl1	chr19	protein_coding	RNA terminal phosphate cyclase-like 1
chr19	29229518;29229919	29229837;29239583	+	29229518	29239583	cassetteExon	0.5	100	100	ENSMUST00000025705.7	ENSMUSG00000024789.14	Jak2	chr19	protein_coding	Janus kinase 2
chr19	29229518	29239583	+	29229919	29239583	5pMXE	0.5	50	50	ENSMUST00000238009.2	ENSMUSG00000024789.14	Jak2	chr19	protein_coding	Janus kinase 2
chr19	29338327;29338539	29338442;29339197	-	29338327	29339197	cassetteExon	0.5	100	100	ENSMUST00000143467.8	ENSMUSG00000016495.13	Plgrkt	chr19	protein_coding	plasminogen receptor, C-terminal lysine transmembrane protein
chr19	29338327	29339065	-	29338327	29339197	A5SS	0.25	50	50	ENSMUST00000143467.8	ENSMUSG00000016495.13	Plgrkt	chr19	protein_coding	plasminogen receptor, C-terminal lysine transmembrane protein
chr19	29338327	29339274	-	29338327	29339197	A5SS	0.25	50	50	ENSMUST00000143467.8	ENSMUSG00000016495.13	Plgrkt	chr19	protein_coding	plasminogen receptor, C-terminal lysine transmembrane protein
chr19	29328574	29335717	-	29326405	29335717	A3SS	0.5	50	50	ENSMUST00000152936.8	ENSMUSG00000016495.13	Plgrkt	chr19	protein_coding	plasminogen receptor, C-terminal lysine transmembrane protein
chr19	29326405	29327760	-	29326405	29335717	A5SS	0.5	50	50	ENSMUST00000152936.8	ENSMUSG00000016495.13	Plgrkt	chr19	protein_coding	plasminogen receptor, C-terminal lysine transmembrane protein
chr19	29338327	29339065	-	29338327	29338442	A5SS&ES	0.25	50	50	ENSMUST00000016639.12	ENSMUSG00000016495.13	Plgrkt	chr19	protein_coding	plasminogen receptor, C-terminal lysine transmembrane protein
chr19	29338327	29339274	-	29338327	29338442	A5SS&ES	0.25	50	50	ENSMUST00000016639.12	ENSMUSG00000016495.13	Plgrkt	chr19	protein_coding	plasminogen receptor, C-terminal lysine transmembrane protein
chr19	29338327	29339274	-	29338327	29339065	5pMXE	0.25	50	50	ENSMUST00000126800.8	ENSMUSG00000016495.13	Plgrkt	chr19	protein_coding	plasminogen receptor, C-terminal lysine transmembrane protein
chr19	29339539	29341164	-	29339539	29342208	A5SS	0.5	50	50	ENSMUST00000138051.2	ENSMUSG00000016495.13	Plgrkt	chr19	protein_coding	plasminogen receptor, C-terminal lysine transmembrane protein
chr19	29465983	29498248	-	29487729	29498248	A3SS&ES	0.5	50	50	ENSMUST00000236439.2	ENSMUSG00000097855.9	A930007I19Rik	chr19	lncRNA	RIKEN cDNA A930007I19 gene
chr19	29482978	29487549	-	29450556	29487549	A3SS	0.5	50	50	ENSMUST00000236439.2	ENSMUSG00000097855.9	A930007I19Rik	chr19	lncRNA	RIKEN cDNA A930007I19 gene
chr19	29498369	29500415	-	29498369	29499290	5pMXE	0.5	50	50	ENSMUST00000181726.2	ENSMUSG00000097855.9	A930007I19Rik	chr19	lncRNA	RIKEN cDNA A930007I19 gene
chr19	29465071	29465844	-	29465071	29465771	A5SS	0.5	50	50	ENSMUST00000181726.2	ENSMUSG00000097855.9	A930007I19Rik	chr19	lncRNA	RIKEN cDNA A930007I19 gene
chr19	29465983	29498248	-	29465983	29477212	A5SS&ES	0.5	50	50	ENSMUST00000181726.2	ENSMUSG00000097855.9	A930007I19Rik	chr19	lncRNA	RIKEN cDNA A930007I19 gene
chr19	29561613	29563181	+	29561613;29561977	29561867;29563181	ES	0.5	50	50	ENSMUST00000043610.13	ENSMUSG00000038658.16	Ric1	chr19	protein_coding	RAB6A GEF complex partner 1
chr19	29573399;29575526	29575147;29577232	+	29573399	29577232	cassetteExon	0.5	100	100	ENSMUST00000160452.2	ENSMUSG00000038658.16	Ric1	chr19	protein_coding	RAB6A GEF complex partner 1
chr19	29595370	29601041	-	29595370;29600659	29600469;29601041	ES	0.5	50	50	ENSMUST00000159692.8	ENSMUSG00000046324.13	Ermp1	chr19	protein_coding	endoplasmic reticulum metallopeptidase 1
chr19	29614796	29623367	-	29614796;29617384	29617257;29623367	ES	0.5	50	50	ENSMUST00000159692.8	ENSMUSG00000046324.13	Ermp1	chr19	protein_coding	endoplasmic reticulum metallopeptidase 1
chr19	29614796	29616839	-	29614796	29617257	A5SS	0.33	50	50	ENSMUST00000159692.8	ENSMUSG00000046324.13	Ermp1	chr19	protein_coding	endoplasmic reticulum metallopeptidase 1
chr19	29614796	29616839	-	29614796	29623367	A5SS	0.33	50	50	ENSMUST00000054083.13	ENSMUSG00000046324.13	Ermp1	chr19	protein_coding	endoplasmic reticulum metallopeptidase 1
chr19	29677570	29681869	+	29677570	29682020	A3SS	0.5	50	50	ENSMUST00000025719.5	ENSMUSG00000024806.5	Mlana	chr19	protein_coding	melan-A
chr19	29700905	29720933	-	29700905;29712605	29712516;29720933	ES	0.5	50	50	ENSMUST00000175726.8	ENSMUSG00000046138.16	9930021J03Rik	chr19	protein_coding	RIKEN cDNA 9930021J03 gene
chr19	29732417	29782682	-	29732417;29763849	29763649;29782682	ES	0.5	50	50	ENSMUST00000175726.8	ENSMUSG00000046138.16	9930021J03Rik	chr19	protein_coding	RIKEN cDNA 9930021J03 gene
chr19	29700905;29707359	29707232;29712516	-	29700905	29712516	cassetteExon	0.5	100	100	ENSMUST00000175726.8	ENSMUSG00000046138.16	9930021J03Rik	chr19	protein_coding	RIKEN cDNA 9930021J03 gene
chr19	29700905	29707232	-	29700905	29720933	A5SS	0.33	50	50	ENSMUST00000175764.9	ENSMUSG00000046138.16	9930021J03Rik	chr19	protein_coding	RIKEN cDNA 9930021J03 gene
chr19	29932068	29934301	+	29932068;29932651	29932601;29934301	ES	0.5	50	50	ENSMUST00000120388.9	ENSMUSG00000024810.17	Il33	chr19	protein_coding	interleukin 33
chr19	29902561;29915292	29915173;29927060	+	29902561	29927060	cassetteExon	0.5	100	100	ENSMUST00000120388.9	ENSMUSG00000024810.17	Il33	chr19	protein_coding	interleukin 33
chr19	29923258	29927060	+	29902561	29927060	A5SS	0.33	50	50	ENSMUST00000120388.9	ENSMUSG00000024810.17	Il33	chr19	protein_coding	interleukin 33
chr19	29923258	29927060	+	29915292	29927060	A5SS	0.33	50	50	ENSMUST00000144528.8	ENSMUSG00000024810.17	Il33	chr19	protein_coding	interleukin 33
chr19	30008289	30016464	+	30008331	30016464	A5SS	0.5	50	50	ENSMUST00000134518.8	ENSMUSG00000024817.14	Uhrf2	chr19	protein_coding	ubiquitin-like, containing PHD and RING finger domains 2
chr19	30549078	30556158	-	30549078;30556072	30556010;30556158	ES	0.5	50	50	ENSMUST00000065067.14	ENSMUSG00000052920.17	Prkg1	chr19	protein_coding	protein kinase, cGMP-dependent, type I
chr19	30596938	30602082	-	30572481	30602082	A3SS	0.5	50	50	ENSMUST00000065067.14	ENSMUSG00000052920.17	Prkg1	chr19	protein_coding	protein kinase, cGMP-dependent, type I
chr19	30687515	30701560	-	30674357	30701560	A3SS	0.5	50	50	ENSMUST00000065067.14	ENSMUSG00000052920.17	Prkg1	chr19	protein_coding	protein kinase, cGMP-dependent, type I
chr19	31722441	31741957	-	31563133	31741957	A3SS	0.5	50	50	ENSMUST00000065067.14	ENSMUSG00000052920.17	Prkg1	chr19	protein_coding	protein kinase, cGMP-dependent, type I
chr19	30549078	30551457	-	30549078	30556010	A5SS	0.25	50	50	ENSMUST00000065067.14	ENSMUSG00000052920.17	Prkg1	chr19	protein_coding	protein kinase, cGMP-dependent, type I
chr19	30549078	30551518	-	30549078	30556010	A5SS	0.25	50	50	ENSMUST00000065067.14	ENSMUSG00000052920.17	Prkg1	chr19	protein_coding	protein kinase, cGMP-dependent, type I
chr19	30701625	30707808	-	30701625	30758695	A5SS	0.5	50	50	ENSMUST00000065067.14	ENSMUSG00000052920.17	Prkg1	chr19	protein_coding	protein kinase, cGMP-dependent, type I
chr19	31563133	31641371	-	31563133	31741957	A5SS	0.5	50	50	ENSMUST00000065067.14	ENSMUSG00000052920.17	Prkg1	chr19	protein_coding	protein kinase, cGMP-dependent, type I
chr19	30549078	30551457	-	30549078	30556158	A5SS	0.25	50	50	ENSMUST00000239061.2	ENSMUSG00000052920.17	Prkg1	chr19	protein_coding	protein kinase, cGMP-dependent, type I
chr19	30549078	30551518	-	30549078	30556158	A5SS	0.25	50	50	ENSMUST00000239061.2	ENSMUSG00000052920.17	Prkg1	chr19	protein_coding	protein kinase, cGMP-dependent, type I
chr19	30549078	30551518	-	30549078	30551457	A5SS	0.25	50	50	ENSMUST00000183135.8	ENSMUSG00000052920.17	Prkg1	chr19	protein_coding	protein kinase, cGMP-dependent, type I
chr19	31846259	31886192	+	31846259;31870598	31870455;31886192	ES	0.5	50	50	ENSMUST00000224564.2	ENSMUSG00000052595.9	A1cf	chr19	protein_coding	APOBEC1 complementation factor
chr19	31910098	31912028	+	31910098	31912052	A3SS	0.5	50	50	ENSMUST00000224304.2	ENSMUSG00000052595.9	A1cf	chr19	protein_coding	APOBEC1 complementation factor
chr19	32038802;32046015	32045904;32078950	-	32038802	32078950	cassetteExon	0.5	100	100	ENSMUST00000237104.2	ENSMUSG00000024887.11	Asah2	chr19	protein_coding	N-acylsphingosine amidohydrolase 2
chr19	31994185	31996342	-	31994188	31996342	A3SS	0.5	50	50	ENSMUST00000237104.2	ENSMUSG00000024887.11	Asah2	chr19	protein_coding	N-acylsphingosine amidohydrolase 2
chr19	32038805	32078950	-	32038802	32078950	A3SS	0.25	50	50	ENSMUST00000237104.2	ENSMUSG00000024887.11	Asah2	chr19	protein_coding	N-acylsphingosine amidohydrolase 2
chr19	32038860	32078950	-	32038802	32078950	A3SS	0.25	50	50	ENSMUST00000237104.2	ENSMUSG00000024887.11	Asah2	chr19	protein_coding	N-acylsphingosine amidohydrolase 2
chr19	32079027	32080419	-	32079027	32085258	A5SS	0.5	50	50	ENSMUST00000237104.2	ENSMUSG00000024887.11	Asah2	chr19	protein_coding	N-acylsphingosine amidohydrolase 2
chr19	32038805;32046015	32045904;32078950	-	32038805	32078950	cassetteExon	0.5	100	100	ENSMUST00000235213.2	ENSMUSG00000024887.11	Asah2	chr19	protein_coding	N-acylsphingosine amidohydrolase 2
chr19	32038860	32078950	-	32038805	32078950	A3SS	0.25	50	50	ENSMUST00000235213.2	ENSMUSG00000024887.11	Asah2	chr19	protein_coding	N-acylsphingosine amidohydrolase 2
chr19	32038802	32045904	-	32038805	32045904	A3SS	0.5	50	50	ENSMUST00000236030.2	ENSMUSG00000024887.11	Asah2	chr19	protein_coding	N-acylsphingosine amidohydrolase 2
chr19	32038802	32078950	-	32046015	32078950	A3SS&ES	0.25	50	50	ENSMUST00000236030.2	ENSMUSG00000024887.11	Asah2	chr19	protein_coding	N-acylsphingosine amidohydrolase 2
chr19	32038860	32078950	-	32046015	32078950	A3SS&ES	0.25	50	50	ENSMUST00000236030.2	ENSMUSG00000024887.11	Asah2	chr19	protein_coding	N-acylsphingosine amidohydrolase 2
chr19	32038802	32078950	-	32038802	32045904	5pMXE	0.5	50	50	ENSMUST00000235395.2	ENSMUSG00000024887.11	Asah2	chr19	protein_coding	N-acylsphingosine amidohydrolase 2
chr19	32329423	32366952	-	32329423	32365620	5pMXE	0.5	50	50	ENSMUST00000099514.10	ENSMUSG00000040451.19	Sgms1	chr19	protein_coding	sphingomyelin synthase 1
chr19	32120263;32134047	32133970;32136924	-	32120263	32136924	cassetteExon	0.5	100	100	ENSMUST00000099514.10	ENSMUSG00000040451.19	Sgms1	chr19	protein_coding	sphingomyelin synthase 1
chr19	32225436;32237497	32237376;32266941	-	32225436	32266941	cassetteExon	0.5	100	100	ENSMUST00000099514.10	ENSMUSG00000040451.19	Sgms1	chr19	protein_coding	sphingomyelin synthase 1
chr19	32134779	32136924	-	32120263	32136924	A3SS	0.25	50	50	ENSMUST00000099514.10	ENSMUSG00000040451.19	Sgms1	chr19	protein_coding	sphingomyelin synthase 1
chr19	32135077	32136924	-	32120263	32136924	A3SS	0.25	50	50	ENSMUST00000099514.10	ENSMUSG00000040451.19	Sgms1	chr19	protein_coding	sphingomyelin synthase 1
chr19	32196541	32200909	-	32137763	32200909	A3SS	0.5	50	50	ENSMUST00000099514.10	ENSMUSG00000040451.19	Sgms1	chr19	protein_coding	sphingomyelin synthase 1
chr19	32137763	32173705	-	32137763	32200909	A5SS	0.33	50	50	ENSMUST00000099514.10	ENSMUSG00000040451.19	Sgms1	chr19	protein_coding	sphingomyelin synthase 1
chr19	32137763	32188228	-	32137763	32200909	A5SS	0.33	50	50	ENSMUST00000099514.10	ENSMUSG00000040451.19	Sgms1	chr19	protein_coding	sphingomyelin synthase 1
chr19	32200990	32216143	-	32200990	32225394	A5SS	0.5	50	50	ENSMUST00000099514.10	ENSMUSG00000040451.19	Sgms1	chr19	protein_coding	sphingomyelin synthase 1
chr19	32225436	32252787	-	32225436	32266941	A5SS	0.25	50	50	ENSMUST00000099514.10	ENSMUSG00000040451.19	Sgms1	chr19	protein_coding	sphingomyelin synthase 1
chr19	32225436	32254286	-	32225436	32266941	A5SS	0.25	50	50	ENSMUST00000099514.10	ENSMUSG00000040451.19	Sgms1	chr19	protein_coding	sphingomyelin synthase 1
chr19	32267031	32300437	-	32267031	32329345	A5SS	0.33	50	50	ENSMUST00000099514.10	ENSMUSG00000040451.19	Sgms1	chr19	protein_coding	sphingomyelin synthase 1
chr19	32267031	32326093	-	32267031	32329345	A5SS	0.33	50	50	ENSMUST00000099514.10	ENSMUSG00000040451.19	Sgms1	chr19	protein_coding	sphingomyelin synthase 1
chr19	32137763	32173705	-	32137763	32188228	A5SS	0.33	50	50	ENSMUST00000151289.9	ENSMUSG00000040451.19	Sgms1	chr19	protein_coding	sphingomyelin synthase 1
chr19	32225436	32252787	-	32225436	32237376	A5SS&ES	0.25	50	50	ENSMUST00000142618.8	ENSMUSG00000040451.19	Sgms1	chr19	protein_coding	sphingomyelin synthase 1
chr19	32225436	32254286	-	32225436	32237376	A5SS&ES	0.25	50	50	ENSMUST00000142618.8	ENSMUSG00000040451.19	Sgms1	chr19	protein_coding	sphingomyelin synthase 1
chr19	32267031	32300437	-	32267031	32326093	A5SS	0.33	50	50	ENSMUST00000142618.8	ENSMUSG00000040451.19	Sgms1	chr19	protein_coding	sphingomyelin synthase 1
chr19	32134779	32136924	-	32134779;32135077	32134866;32136924	ES	0.25	50	50	ENSMUST00000236410.2	ENSMUSG00000040451.19	Sgms1	chr19	protein_coding	sphingomyelin synthase 1
chr19	32225436;32252908	32252787;32254286	-	32225436	32254286	cassetteExon	0.5	100	100	ENSMUST00000236410.2	ENSMUSG00000040451.19	Sgms1	chr19	protein_coding	sphingomyelin synthase 1
chr19	32134047	32136924	-	32134047;32134779	32134723;32136924	ES	0.25	50	50	ENSMUST00000152340.8	ENSMUSG00000040451.19	Sgms1	chr19	protein_coding	sphingomyelin synthase 1
chr19	32134047;32135077	32134723;32136924	-	32134047	32136924	cassetteExon	0.5	100	100	ENSMUST00000134415.2	ENSMUSG00000040451.19	Sgms1	chr19	protein_coding	sphingomyelin synthase 1
chr19	32618811;32623743	32623729;32629296	+	32618811	32629296	cassetteExon	0.5	100	100	ENSMUST00000235594.2	ENSMUSG00000024899.8	Papss2	chr19	protein_coding	3'-phosphoadenosine 5'-phosphosulfate synthase 2
chr19	32597586	32611286	+	32573275	32611286	A5SS	0.5	50	50	ENSMUST00000235594.2	ENSMUSG00000024899.8	Papss2	chr19	protein_coding	3'-phosphoadenosine 5'-phosphosulfate synthase 2
chr19	32680038	32689666	-	32680038;32684409	32684235;32689666	ES	0.5	50	50	ENSMUST00000235412.2	ENSMUSG00000013662.7	Atad1	chr19	protein_coding	ATPase family, AAA domain containing 1
chr19	32684409	32692291	-	32684409	32689666	5pMXE	0.33	50	50	ENSMUST00000235412.2	ENSMUSG00000013662.7	Atad1	chr19	protein_coding	ATPase family, AAA domain containing 1
chr19	32684409	32717042	-	32684409	32689666	5pMXE	0.33	50	50	ENSMUST00000235412.2	ENSMUSG00000013662.7	Atad1	chr19	protein_coding	ATPase family, AAA domain containing 1
chr19	32654250;32658105	32658033;32661402	-	32654250	32661402	cassetteExon	0.5	100	100	ENSMUST00000235412.2	ENSMUSG00000013662.7	Atad1	chr19	protein_coding	ATPase family, AAA domain containing 1
chr19	32664722	32672184	-	32664722	32673192	A5SS	0.5	50	50	ENSMUST00000235412.2	ENSMUSG00000013662.7	Atad1	chr19	protein_coding	ATPase family, AAA domain containing 1
chr19	32684409	32717042	-	32684409;32692381	32692291;32717042	ES	0.25	50	50	ENSMUST00000236985.2	ENSMUSG00000013662.7	Atad1	chr19	protein_coding	ATPase family, AAA domain containing 1
chr19	32692381;32695247	32695062;32717042	-	32692381	32717042	cassetteExon	0.5	100	100	ENSMUST00000236985.2	ENSMUSG00000013662.7	Atad1	chr19	protein_coding	ATPase family, AAA domain containing 1
chr19	32680038;32714674	32714628;32717042	-	32680038;32692381	32684235;32717042	MXE	0.5	100	100	ENSMUST00000236985.2	ENSMUSG00000013662.7	Atad1	chr19	protein_coding	ATPase family, AAA domain containing 1
chr19	32680038	32689666	-	32680038	32684235	A5SS&ES	0.33	50	50	ENSMUST00000236985.2	ENSMUSG00000013662.7	Atad1	chr19	protein_coding	ATPase family, AAA domain containing 1
chr19	32680038;32684409	32684235;32717042	-	32680038;32714674	32714628;32717042	MXE	0.5	100	100	ENSMUST00000235142.2	ENSMUSG00000013662.7	Atad1	chr19	protein_coding	ATPase family, AAA domain containing 1
chr19	32692381	32717042	-	32714674	32717042	A3SS&ES	0.25	50	50	ENSMUST00000235142.2	ENSMUSG00000013662.7	Atad1	chr19	protein_coding	ATPase family, AAA domain containing 1
chr19	32695247	32717042	-	32714674	32717042	A3SS&ES	0.25	50	50	ENSMUST00000235142.2	ENSMUSG00000013662.7	Atad1	chr19	protein_coding	ATPase family, AAA domain containing 1
chr19	32680038	32689666	-	32680038	32714628	A5SS	0.33	50	50	ENSMUST00000235142.2	ENSMUSG00000013662.7	Atad1	chr19	protein_coding	ATPase family, AAA domain containing 1
chr19	32695247	32717042	-	32684409	32717042	A3SS	0.25	50	50	ENSMUST00000236701.2	ENSMUSG00000013662.7	Atad1	chr19	protein_coding	ATPase family, AAA domain containing 1
chr19	32680038;32714674	32714628;32717042	-	32680038;32695247	32684235;32717042	MXE	0.5	100	100	ENSMUST00000236011.2	ENSMUSG00000013662.7	Atad1	chr19	protein_coding	ATPase family, AAA domain containing 1
chr19	33368585	33369355	-	33359925	33369355	A3SS	0.5	50	50	ENSMUST00000163093.2	ENSMUSG00000071573.15	Rnls	chr19	polymorphic_pseudogene	renalase, FAD-dependent amine oxidase
chr19	33359925	33367317	-	33359925	33369355	A5SS	0.5	50	50	ENSMUST00000163093.2	ENSMUSG00000071573.15	Rnls	chr19	polymorphic_pseudogene	renalase, FAD-dependent amine oxidase
chr19	33565743	33738998	-	33565743	33567291	5pMXE	0.33	50	50	ENSMUST00000112508.9	ENSMUSG00000024766.16	Lipo3	chr19	protein_coding	lipase, member O3
chr19	33565743;33566593	33566504;33567291	-	33565743	33567291	cassetteExon	0.5	100	100	ENSMUST00000112508.9	ENSMUSG00000024766.16	Lipo3	chr19	protein_coding	lipase, member O3
chr19	33537055	33538400	-	33537055	33556762	A5SS	0.5	50	50	ENSMUST00000112508.9	ENSMUSG00000024766.16	Lipo3	chr19	protein_coding	lipase, member O3
chr19	33565743	33566504	-	33565743	33738998	A5SS	0.33	50	50	ENSMUST00000025694.7	ENSMUSG00000024766.16	Lipo3	chr19	protein_coding	lipase, member O3
chr19	33700301	33724239	-	33700301	33708206	5pMXE	0.5	50	50	ENSMUST00000238164.2	ENSMUSG00000087303.4	Lipo2	chr19	protein_coding	lipase, member O2
chr19	33723261	33724239	-	33700301	33724239	A3SS	0.5	50	50	ENSMUST00000236408.2	ENSMUSG00000087303.4	Lipo2	chr19	protein_coding	lipase, member O2
chr19	33996191;33997119	33997058;33997623	+	33996191	33997623	cassetteExon	0.5	100	100	ENSMUST00000225505.2	ENSMUSG00000024771.8	Lipk	chr19	protein_coding	lipase, family member K
chr19	33996191	33997608	+	33996191	33997623	A3SS	0.33	50	50	ENSMUST00000225505.2	ENSMUSG00000024771.8	Lipk	chr19	protein_coding	lipase, family member K
chr19	33996191	33997058	+	33996191	33997608	A3SS	0.33	50	50	ENSMUST00000054260.8	ENSMUSG00000024771.8	Lipk	chr19	protein_coding	lipase, family member K
chr19	34046931	34050917	+	34046931;34049266	34049068;34050917	ES	0.5	50	50	ENSMUST00000025682.12	ENSMUSG00000024770.15	Lipn	chr19	protein_coding	lipase, family member N
chr19	34044865	34046027	+	34044985	34046027	A5SS	0.5	50	50	ENSMUST00000025682.12	ENSMUSG00000024770.15	Lipn	chr19	protein_coding	lipase, family member N
chr19	34087074	34089408	+	34087074	34089309	A3SS	0.5	50	50	ENSMUST00000237637.2	ENSMUSG00000056078.7	Lipm	chr19	protein_coding	lipase, family member M
chr19	34106257	34132215	-	34106257	34126616	A5SS&ES	0.33	50	50	ENSMUST00000025686.9	ENSMUSG00000024774.17	Ankrd22	chr19	protein_coding	ankyrin repeat domain 22
chr19	34106257	34138158	-	34106257	34126616	A5SS&ES	0.33	50	50	ENSMUST00000025686.9	ENSMUSG00000024774.17	Ankrd22	chr19	protein_coding	ankyrin repeat domain 22
chr19	34106257	34138158	-	34106257	34132215	5pMXE	0.33	50	50	ENSMUST00000160474.8	ENSMUSG00000024774.17	Ankrd22	chr19	protein_coding	ankyrin repeat domain 22
chr19	34170031	34197587	+	34169995	34197587	A5SS	0.25	50	50	ENSMUST00000239240.2	ENSMUSG00000024776.19	Stambpl1	chr19	protein_coding	STAM binding protein like 1
chr19	34170319	34197587	+	34169995	34197587	A5SS	0.25	50	50	ENSMUST00000239240.2	ENSMUSG00000024776.19	Stambpl1	chr19	protein_coding	STAM binding protein like 1
chr19	34195068	34197587	+	34169995	34197587	A5SS	0.25	50	50	ENSMUST00000239240.2	ENSMUSG00000024776.19	Stambpl1	chr19	protein_coding	STAM binding protein like 1
chr19	34210656	34211361	+	34208926	34211361	A5SS	0.5	50	50	ENSMUST00000239240.2	ENSMUSG00000024776.19	Stambpl1	chr19	protein_coding	STAM binding protein like 1
chr19	34170319	34197587	+	34170031	34197587	A5SS	0.25	50	50	ENSMUST00000054956.15	ENSMUSG00000024776.19	Stambpl1	chr19	protein_coding	STAM binding protein like 1
chr19	34195068	34197587	+	34170031	34197587	A5SS	0.25	50	50	ENSMUST00000054956.15	ENSMUSG00000024776.19	Stambpl1	chr19	protein_coding	STAM binding protein like 1
chr19	34195068	34197587	+	34170319	34197587	A5SS	0.25	50	50	ENSMUST00000129535.8	ENSMUSG00000024776.19	Stambpl1	chr19	protein_coding	STAM binding protein like 1
chr19	34229976	34231470	-	34229976	34232690	A5SS	0.5	50	50	ENSMUST00000039631.10	ENSMUSG00000035783.10	Acta2	chr19	protein_coding	actin, alpha 2, smooth muscle, aorta
chr19	34296051	34296710	+	34296051;34296236	34296183;34296710	ES	0.5	50	50	ENSMUST00000025691.13	ENSMUSG00000024778.14	Fas	chr19	protein_coding	Fas (TNF receptor superfamily member 6)
chr19	34284678;34287569	34287412;34292579	+	34284678	34292579	cassetteExon	0.5	100	100	ENSMUST00000025691.13	ENSMUSG00000024778.14	Fas	chr19	protein_coding	Fas (TNF receptor superfamily member 6)
chr19	34284678	34286436	+	34284678	34292579	A3SS	0.33	50	50	ENSMUST00000025691.13	ENSMUSG00000024778.14	Fas	chr19	protein_coding	Fas (TNF receptor superfamily member 6)
chr19	34277582	34284525	+	34268144	34284525	A5SS	0.5	50	50	ENSMUST00000025691.13	ENSMUSG00000024778.14	Fas	chr19	protein_coding	Fas (TNF receptor superfamily member 6)
chr19	34284678	34286436	+	34284678	34287412	A3SS	0.33	50	50	ENSMUST00000235709.2	ENSMUSG00000024778.14	Fas	chr19	protein_coding	Fas (TNF receptor superfamily member 6)
chr19	34484545	34488223	-	34484545;34486498	34486389;34488223	ES	0.5	50	50	ENSMUST00000178114.2	ENSMUSG00000024781.17	Lipa	chr19	protein_coding	lysosomal acid lipase A
chr19	34502246	34504766	-	34502242	34504766	A3SS	0.5	50	50	ENSMUST00000178114.2	ENSMUSG00000024781.17	Lipa	chr19	protein_coding	lysosomal acid lipase A
chr19	34528422	34547619	+	34528422;34540355	34540263;34547619	ES	0.5	50	50	ENSMUST00000149829.8	ENSMUSG00000045932.13	Ifit2	chr19	protein_coding	interferon-induced protein with tetratricopeptide repeats 2
chr19	34572423	34579290	-	34572423	34576668	5pMXE	0.5	50	50	ENSMUST00000112467.2	ENSMUSG00000079339.8	Ifit1bl1	chr19	protein_coding	interferon induced protein with tetratricpeptide repeats 1B like 1
chr19	34668291	34668829	-	34668291	34724466	A5SS	0.5	50	50	ENSMUST00000009522.4	ENSMUSG00000009378.5	Slc16a12	chr19	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 12
chr19	34804773	34855086	-	34804773	34818157	A5SS&ES	0.5	50	50	ENSMUST00000036584.13	ENSMUSG00000033610.17	Pank1	chr19	protein_coding	pantothenate kinase 1
chr19	34818509	34855086	-	34818509	34855924	A5SS	0.5	50	50	ENSMUST00000036584.13	ENSMUSG00000033610.17	Pank1	chr19	protein_coding	pantothenate kinase 1
chr19	34804773	34855086	-	34804773;34818509	34818157;34855086	ES	0.5	50	50	ENSMUST00000112460.3	ENSMUSG00000033610.17	Pank1	chr19	protein_coding	pantothenate kinase 1
chr19	34804773	34855086	-	34818509	34855086	3pMXE	0.5	50	50	ENSMUST00000237577.2	ENSMUSG00000033610.17	Pank1	chr19	protein_coding	pantothenate kinase 1
chr19	34947517	34950259	+	34947517;34949898	34949797;34950259	ES	0.5	50	50	ENSMUST00000087341.7	ENSMUSG00000024795.12	Kif20b	chr19	protein_coding	kinesin family member 20B
chr19	34936971;34942081	34941929;34943447	+	34936971	34943447	cassetteExon	0.5	100	100	ENSMUST00000087341.7	ENSMUSG00000024795.12	Kif20b	chr19	protein_coding	kinesin family member 20B
chr19	34907222	34909010	+	34907222	34908955	A3SS	0.5	50	50	ENSMUST00000087341.7	ENSMUSG00000024795.12	Kif20b	chr19	protein_coding	kinesin family member 20B
chr19	34914248	34914367	+	34914248	34914338	A3SS	0.5	50	50	ENSMUST00000087341.7	ENSMUSG00000024795.12	Kif20b	chr19	protein_coding	kinesin family member 20B
chr19	34917631	34918733	+	34917631	34918613	A3SS	0.5	50	50	ENSMUST00000087341.7	ENSMUSG00000024795.12	Kif20b	chr19	protein_coding	kinesin family member 20B
chr19	34899951	34902025	+	34899833	34902025	A5SS	0.5	50	50	ENSMUST00000087341.7	ENSMUSG00000024795.12	Kif20b	chr19	protein_coding	kinesin family member 20B
chr19	34912404	34913026	+	34912532	34913026	A5SS	0.5	50	50	ENSMUST00000087341.7	ENSMUSG00000024795.12	Kif20b	chr19	protein_coding	kinesin family member 20B
chr19	35819821	35900887	-	35819821;35865860	35865635;35900887	ES	0.25	50	50	ENSMUST00000236698.2	ENSMUSG00000094707.3	A830019P07Rik	chr19	lncRNA	RIKEN cDNA A830019P07 gene
chr19	35814013;35816376	35816160;35818674	-	35814013	35818674	cassetteExon	0.5	100	100	ENSMUST00000236698.2	ENSMUSG00000094707.3	A830019P07Rik	chr19	lncRNA	RIKEN cDNA A830019P07 gene
chr19	35865860;35891632	35891489;35900887	-	35865860	35900887	cassetteExon	0.5	100	100	ENSMUST00000236698.2	ENSMUSG00000094707.3	A830019P07Rik	chr19	lncRNA	RIKEN cDNA A830019P07 gene
chr19	35839142	35865635	-	35819821	35865635	A3SS	0.5	50	50	ENSMUST00000236698.2	ENSMUSG00000094707.3	A830019P07Rik	chr19	lncRNA	RIKEN cDNA A830019P07 gene
chr19	35818729;35900947	35900887;35901770	-	35818729	35901770	cassetteExon	0.5	100	100	ENSMUST00000237777.2	ENSMUSG00000094707.3	A830019P07Rik	chr19	lncRNA	RIKEN cDNA A830019P07 gene
chr19	35818729	35819764	-	35818729	35901770	A5SS	0.33	50	50	ENSMUST00000237777.2	ENSMUSG00000094707.3	A830019P07Rik	chr19	lncRNA	RIKEN cDNA A830019P07 gene
chr19	35818729	35900887	-	35818729;35819821	35819764;35900887	ES	0.25	50	50	ENSMUST00000178904.2	ENSMUSG00000094707.3	A830019P07Rik	chr19	lncRNA	RIKEN cDNA A830019P07 gene
chr19	35891632	35900887	-	35819821	35900887	A3SS	0.25	50	50	ENSMUST00000178904.2	ENSMUSG00000094707.3	A830019P07Rik	chr19	lncRNA	RIKEN cDNA A830019P07 gene
chr19	35818729	35901770	-	35818729	35900887	5pMXE	0.33	50	50	ENSMUST00000236187.2	ENSMUSG00000094707.3	A830019P07Rik	chr19	lncRNA	RIKEN cDNA A830019P07 gene
chr19	35865860	35900887	-	35818729	35900887	A3SS	0.25	50	50	ENSMUST00000236187.2	ENSMUSG00000094707.3	A830019P07Rik	chr19	lncRNA	RIKEN cDNA A830019P07 gene
chr19	35891632	35900887	-	35818729	35900887	A3SS	0.25	50	50	ENSMUST00000236187.2	ENSMUSG00000094707.3	A830019P07Rik	chr19	lncRNA	RIKEN cDNA A830019P07 gene
chr19	35937799;35941877	35941781;35946709	-	35937799	35946709	cassetteExon	0.5	100	100	ENSMUST00000164639.8	ENSMUSG00000024798.16	Htr7	chr19	protein_coding	5-hydroxytryptamine (serotonin) receptor 7
chr19	35947464;36019012	36018955;36034106	-	35947464	36034106	cassetteExon	0.5	100	100	ENSMUST00000164639.8	ENSMUSG00000024798.16	Htr7	chr19	protein_coding	5-hydroxytryptamine (serotonin) receptor 7
chr19	35937799	35946704	-	35937799	35946709	A5SS	0.33	50	50	ENSMUST00000164639.8	ENSMUSG00000024798.16	Htr7	chr19	protein_coding	5-hydroxytryptamine (serotonin) receptor 7
chr19	35947464	35990157	-	35947464	36034106	A5SS	0.33	50	50	ENSMUST00000164639.8	ENSMUSG00000024798.16	Htr7	chr19	protein_coding	5-hydroxytryptamine (serotonin) receptor 7
chr19	35947464;35990171	35990157;36018955	-	35947464	36018955	cassetteExon	0.5	100	100	ENSMUST00000165215.8	ENSMUSG00000024798.16	Htr7	chr19	protein_coding	5-hydroxytryptamine (serotonin) receptor 7
chr19	35937799	35941781	-	35937799	35946704	A5SS	0.33	50	50	ENSMUST00000164781.2	ENSMUSG00000024798.16	Htr7	chr19	protein_coding	5-hydroxytryptamine (serotonin) receptor 7
chr19	36061360	36062466	+	36061218	36062466	A5SS	0.5	50	50	ENSMUST00000237251.2	ENSMUSG00000024800.9	Rpp30	chr19	protein_coding	ribonuclease P/MRP 30 subunit
chr19	36077639	36078209	+	36077688	36078209	A5SS	0.5	50	50	ENSMUST00000025714.9	ENSMUSG00000024800.9	Rpp30	chr19	protein_coding	ribonuclease P/MRP 30 subunit
chr19	36090217	36092377	-	36090217;36090419	36090335;36092377	ES	0.5	50	50	ENSMUST00000236579.2	ENSMUSG00000024803.10	Ankrd1	chr19	protein_coding	ankyrin repeat domain 1 (cardiac muscle)
chr19	36092491	36092599	-	36092475	36092599	A3SS	0.5	50	50	ENSMUST00000236579.2	ENSMUSG00000024803.10	Ankrd1	chr19	protein_coding	ankyrin repeat domain 1 (cardiac muscle)
chr19	36090217	36092389	-	36090217	36090335	A5SS&ES	0.33	50	50	ENSMUST00000236579.2	ENSMUSG00000024803.10	Ankrd1	chr19	protein_coding	ankyrin repeat domain 1 (cardiac muscle)
chr19	36090217	36092389	-	36090217	36092377	A5SS	0.33	50	50	ENSMUST00000235941.2	ENSMUSG00000024803.10	Ankrd1	chr19	protein_coding	ankyrin repeat domain 1 (cardiac muscle)
chr19	36228782	36241418	-	36196572	36241418	A3SS	0.5	50	50	ENSMUST00000237468.2	ENSMUSG00000117990.2	Gm32027	chr19	lncRNA	predicted gene, 32027
chr19	36420342	36433021	+	36420342;36422477	36422388;36433021	ES	0.33	50	50	ENSMUST00000225920.2	ENSMUSG00000024805.17	Pcgf5	chr19	protein_coding	polycomb group ring finger 5
chr19	36422477;36428023	36427964;36433021	+	36422477	36433021	cassetteExon	0.5	100	100	ENSMUST00000225920.2	ENSMUSG00000024805.17	Pcgf5	chr19	protein_coding	polycomb group ring finger 5
chr19	36325969	36331223	+	36325969	36389356	A3SS	0.5	50	50	ENSMUST00000225920.2	ENSMUSG00000024805.17	Pcgf5	chr19	protein_coding	polycomb group ring finger 5
chr19	36414610	36414706	+	36414610	36414703	A3SS	0.5	50	50	ENSMUST00000225920.2	ENSMUSG00000024805.17	Pcgf5	chr19	protein_coding	polycomb group ring finger 5
chr19	36356559	36389356	+	36325969	36389356	A5SS	0.25	50	50	ENSMUST00000225920.2	ENSMUSG00000024805.17	Pcgf5	chr19	protein_coding	polycomb group ring finger 5
chr19	36369698	36389356	+	36325969	36389356	A5SS	0.25	50	50	ENSMUST00000225920.2	ENSMUSG00000024805.17	Pcgf5	chr19	protein_coding	polycomb group ring finger 5
chr19	36387309	36389356	+	36325969	36389356	A5SS	0.25	50	50	ENSMUST00000225920.2	ENSMUSG00000024805.17	Pcgf5	chr19	protein_coding	polycomb group ring finger 5
chr19	36369698	36389356	+	36356559	36389356	A5SS	0.25	50	50	ENSMUST00000071267.14	ENSMUSG00000024805.17	Pcgf5	chr19	protein_coding	polycomb group ring finger 5
chr19	36387309	36389356	+	36356559	36389356	A5SS	0.25	50	50	ENSMUST00000071267.14	ENSMUSG00000024805.17	Pcgf5	chr19	protein_coding	polycomb group ring finger 5
chr19	36387309	36389356	+	36369698	36389356	A5SS	0.25	50	50	ENSMUST00000224971.2	ENSMUSG00000024805.17	Pcgf5	chr19	protein_coding	polycomb group ring finger 5
chr19	36428023	36433021	+	36420342	36433021	A5SS	0.33	50	50	ENSMUST00000224859.2	ENSMUSG00000024805.17	Pcgf5	chr19	protein_coding	polycomb group ring finger 5
chr19	36577119	36581650	+	36577119;36578928	36578829;36581650	ES	0.5	50	50	ENSMUST00000139215.8	ENSMUSG00000041180.14	Hectd2	chr19	protein_coding	HECT domain E3 ubiquitin protein ligase 2
chr19	36546902;36561474	36561336;36562296	+	36546902	36562296	cassetteExon	0.5	100	100	ENSMUST00000139215.8	ENSMUSG00000041180.14	Hectd2	chr19	protein_coding	HECT domain E3 ubiquitin protein ligase 2
chr19	36564830;36572654	36572609;36574477	+	36564830	36574477	cassetteExon	0.5	100	100	ENSMUST00000139215.8	ENSMUSG00000041180.14	Hectd2	chr19	protein_coding	HECT domain E3 ubiquitin protein ligase 2
chr19	36577119	36578832	+	36577119	36578829	A3SS	0.25	50	50	ENSMUST00000139215.8	ENSMUSG00000041180.14	Hectd2	chr19	protein_coding	HECT domain E3 ubiquitin protein ligase 2
chr19	36577119	36578870	+	36577119	36578829	A3SS	0.25	50	50	ENSMUST00000139215.8	ENSMUSG00000041180.14	Hectd2	chr19	protein_coding	HECT domain E3 ubiquitin protein ligase 2
chr19	36583874	36586665	+	36583874	36586656	A3SS	0.5	50	50	ENSMUST00000139215.8	ENSMUSG00000041180.14	Hectd2	chr19	protein_coding	HECT domain E3 ubiquitin protein ligase 2
chr19	36577119	36581650	+	36577119;36578928	36578832;36581650	ES	0.5	50	50	ENSMUST00000047247.12	ENSMUSG00000041180.14	Hectd2	chr19	protein_coding	HECT domain E3 ubiquitin protein ligase 2
chr19	36577119	36578870	+	36577119	36578832	A3SS	0.25	50	50	ENSMUST00000047247.12	ENSMUSG00000041180.14	Hectd2	chr19	protein_coding	HECT domain E3 ubiquitin protein ligase 2
chr19	36577119	36581650	+	36577119;36578928	36578870;36581650	ES	0.5	50	50	ENSMUST00000155594.9	ENSMUSG00000041180.14	Hectd2	chr19	protein_coding	HECT domain E3 ubiquitin protein ligase 2
chr19	36598892	36602623	-	36591881	36602623	A3SS	0.5	50	50	ENSMUST00000149601.8	ENSMUSG00000087579.8	Hectd2os	chr19	lncRNA	Hectd2, opposite strand
chr19	36621166	36623084	-	36602745	36623084	A3SS	0.5	50	50	ENSMUST00000149601.8	ENSMUSG00000087579.8	Hectd2os	chr19	lncRNA	Hectd2, opposite strand
chr19	36602745	36603241	-	36602745	36623084	A5SS	0.33	50	50	ENSMUST00000149601.8	ENSMUSG00000087579.8	Hectd2os	chr19	lncRNA	Hectd2, opposite strand
chr19	36602745	36603359	-	36602745	36623084	A5SS	0.33	50	50	ENSMUST00000149601.8	ENSMUSG00000087579.8	Hectd2os	chr19	lncRNA	Hectd2, opposite strand
chr19	36623165	36662927	-	36623165	36635828	A5SS&ES	0.5	50	50	ENSMUST00000149601.8	ENSMUSG00000087579.8	Hectd2os	chr19	lncRNA	Hectd2, opposite strand
chr19	36635966	36653232	-	36635966	36682843	A5SS	0.33	50	50	ENSMUST00000149601.8	ENSMUSG00000087579.8	Hectd2os	chr19	lncRNA	Hectd2, opposite strand
chr19	36635966	36662927	-	36635966	36682843	A5SS	0.33	50	50	ENSMUST00000149601.8	ENSMUSG00000087579.8	Hectd2os	chr19	lncRNA	Hectd2, opposite strand
chr19	36623165;36635966	36635828;36662927	-	36623165	36662927	cassetteExon	0.5	100	100	ENSMUST00000142067.8	ENSMUSG00000087579.8	Hectd2os	chr19	lncRNA	Hectd2, opposite strand
chr19	36623165;36636074	36635828;36662927	-	36623165	36662927	cassetteExon	0.5	100	100	ENSMUST00000142067.8	ENSMUSG00000087579.8	Hectd2os	chr19	lncRNA	Hectd2, opposite strand
chr19	36654194	36666639	-	36663067	36666639	A3SS&ES	0.5	50	50	ENSMUST00000142067.8	ENSMUSG00000087579.8	Hectd2os	chr19	lncRNA	Hectd2, opposite strand
chr19	36602745	36603359	-	36602745	36603241	A5SS&ES	0.5	50	50	ENSMUST00000147754.8	ENSMUSG00000087579.8	Hectd2os	chr19	lncRNA	Hectd2, opposite strand
chr19	36636074	36662927	-	36635966	36662927	A3SS	0.33	50	50	ENSMUST00000144045.8	ENSMUSG00000087579.8	Hectd2os	chr19	lncRNA	Hectd2, opposite strand
chr19	36635966	36653232	-	36635966	36662927	A5SS	0.5	50	50	ENSMUST00000144045.8	ENSMUSG00000087579.8	Hectd2os	chr19	lncRNA	Hectd2, opposite strand
chr19	36635966;36663067	36662927;36666639	-	36635966;36654194	36653232;36666639	MXE	0.5	100	100	ENSMUST00000146407.2	ENSMUSG00000087579.8	Hectd2os	chr19	lncRNA	Hectd2, opposite strand
chr19	36623165	36662927	-	36636074	36662927	3pMXE	0.33	50	50	ENSMUST00000128603.2	ENSMUSG00000087579.8	Hectd2os	chr19	lncRNA	Hectd2, opposite strand
chr19	36852773	36856635	+	36852773;36853773	36853585;36856635	ES	0.5	50	50	ENSMUST00000025729.12	ENSMUSG00000024811.12	Tnks2	chr19	protein_coding	tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
chr19	36832357	36833189	+	36832357	36835203	A3SS	0.5	50	50	ENSMUST00000025729.12	ENSMUSG00000024811.12	Tnks2	chr19	protein_coding	tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
chr19	36836576;36839765	36839486;36843352	+	36836576	36843352	cassetteExon	0.5	100	100	ENSMUST00000167724.2	ENSMUSG00000024811.12	Tnks2	chr19	protein_coding	tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
chr19	37065987	37103732	-	37065987;37083214	37083191;37103732	ES	0.33	50	50	ENSMUST00000079754.11	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37065960	37103732	-	37083214	37103732	A3SS&ES	0.33	50	50	ENSMUST00000079754.11	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37103788	37116531	-	37103788	37116462	A5SS	0.5	50	50	ENSMUST00000079754.11	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37152385	37152465	-	37152385	37184694	A5SS	0.12	50	50	ENSMUST00000079754.11	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37152385	37152613	-	37152385	37184694	A5SS	0.12	50	50	ENSMUST00000079754.11	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37152385	37152936	-	37152385	37184694	A5SS	0.12	50	50	ENSMUST00000079754.11	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37152385	37153293	-	37152385	37184694	A5SS	0.12	50	50	ENSMUST00000079754.11	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37152385	37155308	-	37152385	37184694	A5SS	0.12	50	50	ENSMUST00000079754.11	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37152385	37175388	-	37152385	37184694	A5SS	0.12	50	50	ENSMUST00000079754.11	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37152385	37184632	-	37152385	37184694	A5SS	0.12	50	50	ENSMUST00000079754.11	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37065960	37103732	-	37065987	37103732	A3SS	0.33	50	50	ENSMUST00000124158.8	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37152385	37155308	-	37152385	37152936	5pMXE	0.12	50	50	ENSMUST00000154376.8	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37152385	37175388	-	37152385	37152936	5pMXE	0.12	50	50	ENSMUST00000154376.8	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37152385	37184632	-	37152385	37152936	5pMXE	0.12	50	50	ENSMUST00000154376.8	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37152385	37152465	-	37152385	37152936	A5SS	0.12	50	50	ENSMUST00000154376.8	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37152385	37152613	-	37152385	37152936	A5SS	0.12	50	50	ENSMUST00000154376.8	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37152385	37153293	-	37152385	37152936	A5SS	0.12	50	50	ENSMUST00000154376.8	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37152385	37152465	-	37152385	37184632	A5SS	0.12	50	50	ENSMUST00000126188.8	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37152385	37152613	-	37152385	37184632	A5SS	0.12	50	50	ENSMUST00000126188.8	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37152385	37153293	-	37152385	37184632	A5SS	0.12	50	50	ENSMUST00000126188.8	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37152385	37155308	-	37152385	37184632	A5SS	0.12	50	50	ENSMUST00000126188.8	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37152385	37175388	-	37152385	37184632	A5SS	0.12	50	50	ENSMUST00000126188.8	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37152385	37152465	-	37152385	37175388	A5SS	0.12	50	50	ENSMUST00000123727.8	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37152385	37152613	-	37152385	37175388	A5SS	0.12	50	50	ENSMUST00000123727.8	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37152385	37153293	-	37152385	37175388	A5SS	0.12	50	50	ENSMUST00000123727.8	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37152385	37155308	-	37152385	37175388	A5SS	0.12	50	50	ENSMUST00000123727.8	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37152385	37152465	-	37152385	37155308	A5SS	0.12	50	50	ENSMUST00000133988.2	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37152385	37152613	-	37152385	37155308	A5SS	0.12	50	50	ENSMUST00000133988.2	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37152385	37153293	-	37152385	37155308	A5SS	0.12	50	50	ENSMUST00000133988.2	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37152385	37152465	-	37152385	37153293	A5SS	0.12	50	50	ENSMUST00000142973.2	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37152385	37152613	-	37152385	37153293	A5SS	0.12	50	50	ENSMUST00000142973.2	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37152385	37152465	-	37152385	37152613	A5SS	0.12	50	50	ENSMUST00000131917.2	ENSMUSG00000039652.17	Cpeb3	chr19	protein_coding	cytoplasmic polyadenylation element binding protein 3
chr19	37197885	37198068	+	37197885	37198038	A3SS	0.5	50	50	ENSMUST00000024078.15	ENSMUSG00000023307.15	Marchf5	chr19	protein_coding	membrane associated ring-CH-type finger 5
chr19	37265607;37267587	37267443;37273282	-	37265607;37268213	37268069;37273282	MXE	0.5	100	100	ENSMUST00000131070.3	ENSMUSG00000056999.17	Ide	chr19	protein_coding	insulin degrading enzyme
chr19	37281077	37281293	-	37275573	37281293	A3SS	0.5	50	50	ENSMUST00000131070.3	ENSMUSG00000056999.17	Ide	chr19	protein_coding	insulin degrading enzyme
chr19	37281395	37284733	-	37281395	37287187	A5SS	0.5	50	50	ENSMUST00000131070.3	ENSMUSG00000056999.17	Ide	chr19	protein_coding	insulin degrading enzyme
chr19	37308011	37315208	-	37308011	37339913	A5SS	0.5	50	50	ENSMUST00000131070.3	ENSMUSG00000056999.17	Ide	chr19	protein_coding	insulin degrading enzyme
chr19	37265607	37267443	-	37265607	37268069	A5SS	0.5	50	50	ENSMUST00000134740.2	ENSMUSG00000056999.17	Ide	chr19	protein_coding	insulin degrading enzyme
chr19	37425302	37425637	+	37423681	37425637	A5SS	0.5	50	50	ENSMUST00000025944.9	ENSMUSG00000024986.13	Hhex	chr19	protein_coding	hematopoietically expressed homeobox
chr19	37559002	37560047	+	37559002	37560041	A3SS	0.5	50	50	ENSMUST00000238954.2	ENSMUSG00000053799.9	Exoc6	chr19	protein_coding	exocyst complex component 6
chr19	37539013	37558831	+	37525347	37558831	A5SS	0.5	50	50	ENSMUST00000238954.2	ENSMUSG00000053799.9	Exoc6	chr19	protein_coding	exocyst complex component 6
chr19	37956900;37958393	37958355;37960623	-	37956900	37960623	cassetteExon	0.5	100	100	ENSMUST00000172095.3	ENSMUSG00000048612.17	Myof	chr19	protein_coding	myoferlin
chr19	37915442	37919434	-	37919417	37919434	A3SS&ES	0.5	50	50	ENSMUST00000172095.3	ENSMUSG00000048612.17	Myof	chr19	protein_coding	myoferlin
chr19	37936451	37937999	-	37934193	37937999	A3SS	0.5	50	50	ENSMUST00000172095.3	ENSMUSG00000048612.17	Myof	chr19	protein_coding	myoferlin
chr19	37888215	37889525	-	37888215	37889685	A5SS	0.5	50	50	ENSMUST00000172095.3	ENSMUSG00000048612.17	Myof	chr19	protein_coding	myoferlin
chr19	37889832	37901895	-	37889832	37890272	A5SS&ES	0.5	50	50	ENSMUST00000172095.3	ENSMUSG00000048612.17	Myof	chr19	protein_coding	myoferlin
chr19	38043529	38046237	+	38043529;38045990	38045858;38046237	ES	0.25	50	50	ENSMUST00000235601.2	ENSMUSG00000024989.16	Cep55	chr19	protein_coding	centrosomal protein 55
chr19	38043765	38045858	+	38043529	38045858	A5SS	0.5	50	50	ENSMUST00000235601.2	ENSMUSG00000024989.16	Cep55	chr19	protein_coding	centrosomal protein 55
chr19	38045928	38046237	+	38045990	38046237	A5SS	0.25	50	50	ENSMUST00000235601.2	ENSMUSG00000024989.16	Cep55	chr19	protein_coding	centrosomal protein 55
chr19	38046014	38046237	+	38045990	38046237	A5SS	0.25	50	50	ENSMUST00000235601.2	ENSMUSG00000024989.16	Cep55	chr19	protein_coding	centrosomal protein 55
chr19	38043529	38046237	+	38043529;38045928	38045858;38046237	ES	0.25	50	50	ENSMUST00000236044.2	ENSMUSG00000024989.16	Cep55	chr19	protein_coding	centrosomal protein 55
chr19	38060338	38061749	+	38060338	38061746	A3SS	0.5	50	50	ENSMUST00000236044.2	ENSMUSG00000024989.16	Cep55	chr19	protein_coding	centrosomal protein 55
chr19	38046014	38046237	+	38045928	38046237	A5SS	0.25	50	50	ENSMUST00000236044.2	ENSMUSG00000024989.16	Cep55	chr19	protein_coding	centrosomal protein 55
chr19	38043529;38046014	38045858;38046237	+	38043529	38046237	cassetteExon	0.5	100	100	ENSMUST00000116506.8	ENSMUSG00000024989.16	Cep55	chr19	protein_coding	centrosomal protein 55
chr19	38043529	38046237	+	38046014	38046237	A5SS&ES	0.25	50	50	ENSMUST00000169673.3	ENSMUSG00000024989.16	Cep55	chr19	protein_coding	centrosomal protein 55
chr19	38113095	38113206	-	38113095	38113403	A5SS	0.33	50	50	ENSMUST00000025951.14	ENSMUSG00000024990.14	Rbp4	chr19	protein_coding	retinol binding protein 4, plasma
chr19	38113095	38113415	-	38113095	38113403	A5SS	0.33	50	50	ENSMUST00000025951.14	ENSMUSG00000024990.14	Rbp4	chr19	protein_coding	retinol binding protein 4, plasma
chr19	38113095	38113415	-	38113095	38113206	5pMXE	0.33	50	50	ENSMUST00000112335.4	ENSMUSG00000024990.14	Rbp4	chr19	protein_coding	retinol binding protein 4, plasma
chr19	38166769;38168528	38168454;38168619	+	38166769	38168619	cassetteExon	0.5	100	100	ENSMUST00000112329.3	ENSMUSG00000024992.14	Pde6c	chr19	protein_coding	phosphodiesterase 6C, cGMP specific, cone, alpha prime
chr19	38210398	38212410	-	38210361	38212410	A3SS	0.5	50	50	ENSMUST00000067167.6	ENSMUSG00000054237.7	Fra10ac1	chr19	protein_coding	FRA10AC1 homolog (human)
chr19	38253545	38272418	+	38253545;38254094	38254023;38272418	ES	0.5	50	50	ENSMUST00000198518.5	ENSMUSG00000067242.12	Lgi1	chr19	protein_coding	leucine-rich repeat LGI family, member 1
chr19	38286448	38289165	+	38286448	38289156	A3SS	0.5	50	50	ENSMUST00000198518.5	ENSMUSG00000067242.12	Lgi1	chr19	protein_coding	leucine-rich repeat LGI family, member 1
chr19	38289773	38294849	+	38289773	38294068	A3SS	0.5	50	50	ENSMUST00000198518.5	ENSMUSG00000067242.12	Lgi1	chr19	protein_coding	leucine-rich repeat LGI family, member 1
chr19	38253554	38254023	+	38253545	38254023	A5SS	0.5	50	50	ENSMUST00000198518.5	ENSMUSG00000067242.12	Lgi1	chr19	protein_coding	leucine-rich repeat LGI family, member 1
chr19	38253545	38272418	+	38254094	38272418	A5SS&ES	0.5	50	50	ENSMUST00000087252.12	ENSMUSG00000067242.12	Lgi1	chr19	protein_coding	leucine-rich repeat LGI family, member 1
chr19	38253545;38254094	38254023;38286377	+	38253545;38272661	38272418;38286377	MXE	0.5	100	100	ENSMUST00000199812.5	ENSMUSG00000067242.12	Lgi1	chr19	protein_coding	leucine-rich repeat LGI family, member 1
chr19	38254094;38272661	38272418;38286377	+	38254094	38286377	cassetteExon	0.5	100	100	ENSMUST00000197123.2	ENSMUSG00000067242.12	Lgi1	chr19	protein_coding	leucine-rich repeat LGI family, member 1
chr19	38253545	38272418	+	38253545	38254023	3pMXE	0.5	50	50	ENSMUST00000199665.2	ENSMUSG00000067242.12	Lgi1	chr19	protein_coding	leucine-rich repeat LGI family, member 1
chr19	38469804	38512359	+	38469804;38491628	38491556;38512359	ES	0.5	50	50	ENSMUST00000181994.2	ENSMUSG00000024998.18	Plce1	chr19	protein_coding	phospholipase C, epsilon 1
chr19	38734339;38736895	38736854;38737736	+	38734339	38737736	cassetteExon	0.5	100	100	ENSMUST00000182481.8	ENSMUSG00000024998.18	Plce1	chr19	protein_coding	phospholipase C, epsilon 1
chr19	38571928	38608887	+	38513896	38608887	A5SS	0.5	50	50	ENSMUST00000182481.8	ENSMUSG00000024998.18	Plce1	chr19	protein_coding	phospholipase C, epsilon 1
chr19	38884513	38887313	+	38884513	38896216	A3SS	0.5	50	50	ENSMUST00000235558.2	ENSMUSG00000048720.9	Tbc1d12	chr19	protein_coding	TBC1D12: TBC1 domain family, member 12
chr19	38889859	38896216	+	38884513	38896216	A5SS	0.5	50	50	ENSMUST00000235558.2	ENSMUSG00000048720.9	Tbc1d12	chr19	protein_coding	TBC1D12: TBC1 domain family, member 12
chr19	38919662	38919835	+	38919519	38919835	A5SS	0.5	50	50	ENSMUST00000025965.12	ENSMUSG00000025001.12	Hells	chr19	protein_coding	helicase, lymphoid specific
chr19	38919956	38923858	+	38919956	38941987	A3SS	0.5	50	50	ENSMUST00000155465.2	ENSMUSG00000025001.12	Hells	chr19	protein_coding	helicase, lymphoid specific
chr19	38940375	38941987	+	38919956	38941987	A5SS	0.5	50	50	ENSMUST00000155465.2	ENSMUSG00000025001.12	Hells	chr19	protein_coding	helicase, lymphoid specific
chr19	39102540	39130719	+	39102540;39130497	39130335;39130719	ES	0.5	50	50	ENSMUST00000087234.3	ENSMUSG00000067229.4	Cyp2c66	chr19	protein_coding	cytochrome P450, family 2, subfamily c, polypeptide 66
chr19	39261814	39279173	+	39261814	39262957	3pMXE	0.5	50	50	ENSMUST00000176493.8	ENSMUSG00000093610.8	Cyp2c53-ps	chr19	transcribed_unprocessed_pseudogene	cytochrome P450, family 2, subfamily c, polypeptide 53-ps
chr19	39244664	39259904	+	39241890	39259904	A5SS	0.5	50	50	ENSMUST00000176493.8	ENSMUSG00000093610.8	Cyp2c53-ps	chr19	transcribed_unprocessed_pseudogene	cytochrome P450, family 2, subfamily c, polypeptide 53-ps
chr19	39257945	39261673	+	39260091	39261673	A5SS&ES	0.5	50	50	ENSMUST00000176493.8	ENSMUSG00000093610.8	Cyp2c53-ps	chr19	transcribed_unprocessed_pseudogene	cytochrome P450, family 2, subfamily c, polypeptide 53-ps
chr19	39279335	39279482	+	39279335	39279501	A3SS	0.5	50	50	ENSMUST00000176624.8	ENSMUSG00000003053.18	Cyp2c29	chr19	protein_coding	cytochrome P450, family 2, subfamily c, polypeptide 29
chr19	39275729	39279173	+	39261814	39279173	A5SS	0.5	50	50	ENSMUST00000176624.8	ENSMUSG00000003053.18	Cyp2c29	chr19	protein_coding	cytochrome P450, family 2, subfamily c, polypeptide 29
chr19	39791100;39791277	39791216;39792214	-	39791100	39792214	cassetteExon	0.5	100	100	ENSMUST00000160476.9	ENSMUSG00000025004.17	Cyp2c40	chr19	protein_coding	cytochrome P450, family 2, subfamily c, polypeptide 40
chr19	39796121;39800845	39800789;39800999	-	39796121	39800999	cassetteExon	0.5	100	100	ENSMUST00000160476.9	ENSMUSG00000025004.17	Cyp2c40	chr19	protein_coding	cytochrome P450, family 2, subfamily c, polypeptide 40
chr19	39792247	39795610	-	39792374	39795610	A3SS	0.33	50	50	ENSMUST00000160476.9	ENSMUSG00000025004.17	Cyp2c40	chr19	protein_coding	cytochrome P450, family 2, subfamily c, polypeptide 40
chr19	39792303	39795610	-	39792374	39795610	A3SS	0.33	50	50	ENSMUST00000160476.9	ENSMUSG00000025004.17	Cyp2c40	chr19	protein_coding	cytochrome P450, family 2, subfamily c, polypeptide 40
chr19	39796073	39800999	-	39796121	39800999	A3SS	0.33	50	50	ENSMUST00000160476.9	ENSMUSG00000025004.17	Cyp2c40	chr19	protein_coding	cytochrome P450, family 2, subfamily c, polypeptide 40
chr19	39792247	39795610	-	39792303	39795610	A3SS	0.33	50	50	ENSMUST00000162630.3	ENSMUSG00000025004.17	Cyp2c40	chr19	protein_coding	cytochrome P450, family 2, subfamily c, polypeptide 40
chr19	39796073	39800999	-	39800845	39800999	A3SS&ES	0.33	50	50	ENSMUST00000162434.2	ENSMUSG00000025004.17	Cyp2c40	chr19	protein_coding	cytochrome P450, family 2, subfamily c, polypeptide 40
chr19	39864834	39865950	-	39864834;39865011	39864950;39865950	ES	0.5	50	50	ENSMUST00000238049.2	ENSMUSG00000092008.3	Cyp2c69	chr19	protein_coding	cytochrome P450, family 2, subfamily c, polypeptide 69
chr19	39866110	39869537	-	39866039	39869537	A3SS	0.5	50	50	ENSMUST00000238049.2	ENSMUSG00000092008.3	Cyp2c69	chr19	protein_coding	cytochrome P450, family 2, subfamily c, polypeptide 69
chr19	40079549;40080824	40080648;40085161	+	40079549	40085161	cassetteExon	0.5	100	100	ENSMUST00000068094.13	ENSMUSG00000054827.13	Cyp2c50	chr19	protein_coding	cytochrome P450, family 2, subfamily c, polypeptide 50
chr19	40168954	40175539	-	40168954;40172472	40172310;40175539	ES	0.33	50	50	ENSMUST00000051846.13	ENSMUSG00000060613.11	Cyp2c70	chr19	protein_coding	cytochrome P450, family 2, subfamily c, polypeptide 70
chr19	40156067	40175539	-	40156067;40168954	40168805;40175539	ES	0.33	50	50	ENSMUST00000171604.8	ENSMUSG00000060613.11	Cyp2c70	chr19	protein_coding	cytochrome P450, family 2, subfamily c, polypeptide 70
chr19	40172472	40175539	-	40156067	40175539	A3SS	0.33	50	50	ENSMUST00000165102.2	ENSMUSG00000060613.11	Cyp2c70	chr19	protein_coding	cytochrome P450, family 2, subfamily c, polypeptide 70
chr19	40306512	40313191	-	40306512;40310404	40310237;40313191	ES	0.5	50	50	ENSMUST00000239304.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40353610	40361920	-	40353610;40358163	40358134;40361920	ES	0.5	50	50	ENSMUST00000239304.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40362061	40365428	-	40362061	40365089	5pMXE	0.25	50	50	ENSMUST00000239304.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40362061	40366098	-	40362061	40365089	5pMXE	0.25	50	50	ENSMUST00000239304.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40362061	40370965	-	40362061	40365089	5pMXE	0.25	50	50	ENSMUST00000239304.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40341009;40349947	40349486;40351646	-	40341009	40351646	cassetteExon	0.5	100	100	ENSMUST00000239304.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40341009;40349947	40349873;40351646	-	40341009	40351646	cassetteExon	0.5	100	100	ENSMUST00000239304.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40287965	40298025	-	40288097	40298025	A3SS	0.5	50	50	ENSMUST00000239304.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40287965	40300113	-	40298777	40300113	A3SS&ES	0.33	50	50	ENSMUST00000239304.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40288746	40300113	-	40298777	40300113	A3SS&ES	0.33	50	50	ENSMUST00000239304.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40315381	40315894	-	40313276	40315894	A3SS	0.5	50	50	ENSMUST00000239304.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40332883	40338343	-	40325479	40338343	A3SS	0.5	50	50	ENSMUST00000239304.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40340892	40340962	-	40340850	40340962	A3SS	0.5	50	50	ENSMUST00000239304.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40313276	40313915	-	40313276	40315894	A5SS	0.5	50	50	ENSMUST00000239304.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40325479	40328489	-	40325479	40338343	A5SS	0.33	50	50	ENSMUST00000239304.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40325479	40329129	-	40325479	40338343	A5SS	0.33	50	50	ENSMUST00000239304.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40362061	40370965	-	40362061;40365460	40365428;40370965	ES	0.25	50	50	ENSMUST00000226047.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40387054	40439758	-	40387054;40390754	40390702;40439758	ES	0.33	50	50	ENSMUST00000226047.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40390754	40502115	-	40390754;40439842	40439758;40502115	ES	0.33	50	50	ENSMUST00000226047.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40287965;40288746	40288687;40300113	-	40287965	40300113	cassetteExon	0.5	100	100	ENSMUST00000226047.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40362061;40365247	40365089;40365428	-	40362061	40365428	cassetteExon	0.5	100	100	ENSMUST00000226047.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40362061;40365247	40365089;40370965	-	40362061;40365460	40365428;40370965	MXE	0.5	100	100	ENSMUST00000226047.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40371077;40371226	40371200;40381832	-	40371077	40381832	cassetteExon	0.5	100	100	ENSMUST00000226047.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40381960;40384212	40384123;40386986	-	40381960	40386986	cassetteExon	0.5	100	100	ENSMUST00000226047.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40439842;40490029	40489893;40502115	-	40439842	40502115	cassetteExon	0.5	100	100	ENSMUST00000226047.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40366823	40370965	-	40365460	40370965	A3SS	0.25	50	50	ENSMUST00000226047.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40371032	40439758	-	40390754	40439758	A3SS&ES	0.33	50	50	ENSMUST00000226047.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40287965	40298025	-	40287965	40300113	A5SS	0.33	50	50	ENSMUST00000226047.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40362061	40366098	-	40362061	40365428	A5SS&ES	0.25	50	50	ENSMUST00000226047.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40365460	40366098	-	40365460	40370965	A5SS	0.5	50	50	ENSMUST00000226047.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40439842	40475941	-	40439842	40502115	A5SS	0.25	50	50	ENSMUST00000226047.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40439842	40501815	-	40439842	40502115	A5SS	0.25	50	50	ENSMUST00000226047.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40362061;40365247	40365089;40370965	-	40362061	40370965	cassetteExon	0.5	100	100	ENSMUST00000224247.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40362061;40365460	40365089;40370965	-	40362061	40370965	cassetteExon	0.5	100	100	ENSMUST00000224247.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40366823	40370965	-	40362061	40370965	A3SS	0.25	50	50	ENSMUST00000224247.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40362061	40366098	-	40362061	40370965	A5SS	0.25	50	50	ENSMUST00000224247.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40439842	40475941	-	40439842	40489893	A5SS	0.25	50	50	ENSMUST00000224247.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40439842	40501815	-	40439842	40489893	A5SS&ES	0.25	50	50	ENSMUST00000224247.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40387054;40439842	40439758;40502115	-	40387054;40390754	40390702;40502115	MXE	0.5	100	100	ENSMUST00000225148.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40490029	40502115	-	40390754	40502115	A3SS	0.33	50	50	ENSMUST00000225148.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40313276	40315894	-	40313276;40315381	40313915;40315894	ES	0.5	50	50	ENSMUST00000224667.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40325479;40329194	40329129;40332800	-	40325479;40328590	40328489;40332800	MXE	0.5	100	100	ENSMUST00000224667.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40328590;40329194	40329129;40332800	-	40328590	40332800	cassetteExon	0.5	100	100	ENSMUST00000224667.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40325479	40329129	-	40325479;40328590	40328489;40329129	ES	0.5	50	50	ENSMUST00000225153.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40341009	40349873	-	40341009;40349548	40349486;40349873	ES	0.5	50	50	ENSMUST00000225153.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40365247	40370965	-	40365460	40370965	A3SS	0.25	50	50	ENSMUST00000225153.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40390754	40502115	-	40390754	40439758	A5SS&ES	0.5	50	50	ENSMUST00000225153.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40439842	40475941	-	40439842	40501815	A5SS	0.25	50	50	ENSMUST00000225153.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40287965	40300113	-	40287965;40298777	40298025;40300113	ES	0.33	50	50	ENSMUST00000238831.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40287965;40288746	40288687;40300113	-	40287965;40298777	40298025;40300113	MXE	0.5	100	100	ENSMUST00000238831.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40287965	40298025	-	40287965	40288687	A5SS&ES	0.33	50	50	ENSMUST00000225710.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40387054	40439758	-	40387054	40390702	5pMXE	0.5	50	50	ENSMUST00000099466.10	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40325479	40329129	-	40325479	40328489	5pMXE	0.33	50	50	ENSMUST00000226028.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40371077	40381832	-	40371077	40371200	5pMXE	0.5	50	50	ENSMUST00000224583.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40362061	40370965	-	40362061;40366823	40366098;40370965	ES	0.25	50	50	ENSMUST00000225766.3	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40362061;40365247	40365089;40370965	-	40362061;40366823	40366098;40370965	MXE	0.5	100	100	ENSMUST00000225766.3	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40362061;40365460	40365089;40366098	-	40362061	40366098	cassetteExon	0.5	100	100	ENSMUST00000225766.3	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40362061;40365460	40365428;40366098	-	40362061	40366098	cassetteExon	0.5	100	100	ENSMUST00000225766.3	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40362061;40365460	40365089;40370965	-	40362061;40366823	40366098;40370965	MXE	0.5	100	100	ENSMUST00000225766.3	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40362061;40365460	40365428;40370965	-	40362061;40366823	40366098;40370965	MXE	0.5	100	100	ENSMUST00000225766.3	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40362061	40370965	-	40365460	40370965	3pMXE	0.25	50	50	ENSMUST00000223724.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40387054	40439758	-	40371032	40439758	A3SS	0.33	50	50	ENSMUST00000223724.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40362061	40370965	-	40365247	40370965	3pMXE	0.25	50	50	ENSMUST00000225879.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40365247;40365460	40365428;40370965	-	40365247	40370965	cassetteExon	0.5	100	100	ENSMUST00000225879.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40366823	40370965	-	40365247	40370965	A3SS	0.25	50	50	ENSMUST00000225879.2	ENSMUSG00000025006.19	Sorbs1	chr19	protein_coding	sorbin and SH3 domain containing 1
chr19	40574049	40576754	-	40574049;40574636	40574571;40576754	ES	0.25	50	50	ENSMUST00000176939.8	ENSMUSG00000025007.14	Aldh18a1	chr19	protein_coding	aldehyde dehydrogenase 18 family, member A1
chr19	40562305	40562655	-	40562305	40562661	A5SS	0.5	50	50	ENSMUST00000176939.8	ENSMUSG00000025007.14	Aldh18a1	chr19	protein_coding	aldehyde dehydrogenase 18 family, member A1
chr19	40566365;40568520	40568306;40576754	-	40566365	40576754	cassetteExon	0.5	100	100	ENSMUST00000176955.8	ENSMUSG00000025007.14	Aldh18a1	chr19	protein_coding	aldehyde dehydrogenase 18 family, member A1
chr19	40574049	40576754	-	40566365	40576754	A3SS	0.25	50	50	ENSMUST00000176955.8	ENSMUSG00000025007.14	Aldh18a1	chr19	protein_coding	aldehyde dehydrogenase 18 family, member A1
chr19	40574636	40576754	-	40566365	40576754	A3SS	0.25	50	50	ENSMUST00000176955.8	ENSMUSG00000025007.14	Aldh18a1	chr19	protein_coding	aldehyde dehydrogenase 18 family, member A1
chr19	40568520	40576754	-	40568520;40574049	40573934;40576754	ES	0.25	50	50	ENSMUST00000149476.3	ENSMUSG00000025007.14	Aldh18a1	chr19	protein_coding	aldehyde dehydrogenase 18 family, member A1
chr19	40574636	40576754	-	40568520	40576754	A3SS	0.25	50	50	ENSMUST00000175932.2	ENSMUSG00000025007.14	Aldh18a1	chr19	protein_coding	aldehyde dehydrogenase 18 family, member A1
chr19	40600967	40603918	+	40600967	40602429	3pMXE	0.33	50	50	ENSMUST00000163023.2	ENSMUSG00000048120.17	Entpd1	chr19	protein_coding	ectonucleoside triphosphate diphosphohydrolase 1
chr19	40600967	40699607	+	40600967	40602429	3pMXE	0.33	50	50	ENSMUST00000163023.2	ENSMUSG00000048120.17	Entpd1	chr19	protein_coding	ectonucleoside triphosphate diphosphohydrolase 1
chr19	40600967	40699607	+	40600967	40603918	3pMXE	0.33	50	50	ENSMUST00000160286.2	ENSMUSG00000048120.17	Entpd1	chr19	protein_coding	ectonucleoside triphosphate diphosphohydrolase 1
chr19	40722230	40727909	+	40722230	40725194	A3SS&ES	0.5	50	50	ENSMUST00000134063.8	ENSMUSG00000048120.17	Entpd1	chr19	protein_coding	ectonucleoside triphosphate diphosphohydrolase 1
chr19	40648344	40699607	+	40600967	40699607	A5SS	0.25	50	50	ENSMUST00000134063.8	ENSMUSG00000048120.17	Entpd1	chr19	protein_coding	ectonucleoside triphosphate diphosphohydrolase 1
chr19	40648344	40708901	+	40699734	40708901	A5SS&ES	0.33	50	50	ENSMUST00000134063.8	ENSMUSG00000048120.17	Entpd1	chr19	protein_coding	ectonucleoside triphosphate diphosphohydrolase 1
chr19	40648771	40699607	+	40600967	40699607	A5SS	0.25	50	50	ENSMUST00000134063.8	ENSMUSG00000048120.17	Entpd1	chr19	protein_coding	ectonucleoside triphosphate diphosphohydrolase 1
chr19	40649307	40699607	+	40600967	40699607	A5SS	0.25	50	50	ENSMUST00000134063.8	ENSMUSG00000048120.17	Entpd1	chr19	protein_coding	ectonucleoside triphosphate diphosphohydrolase 1
chr19	40670272	40708901	+	40699734	40708901	A5SS&ES	0.33	50	50	ENSMUST00000134063.8	ENSMUSG00000048120.17	Entpd1	chr19	protein_coding	ectonucleoside triphosphate diphosphohydrolase 1
chr19	40724756	40725194	+	40722230	40725194	A5SS	0.5	50	50	ENSMUST00000134063.8	ENSMUSG00000048120.17	Entpd1	chr19	protein_coding	ectonucleoside triphosphate diphosphohydrolase 1
chr19	40648344	40708901	+	40648344;40699734	40699607;40708901	ES	0.33	50	50	ENSMUST00000112231.9	ENSMUSG00000048120.17	Entpd1	chr19	protein_coding	ectonucleoside triphosphate diphosphohydrolase 1
chr19	40648771	40699607	+	40648344	40699607	A5SS	0.25	50	50	ENSMUST00000112231.9	ENSMUSG00000048120.17	Entpd1	chr19	protein_coding	ectonucleoside triphosphate diphosphohydrolase 1
chr19	40649307	40699607	+	40648344	40699607	A5SS	0.25	50	50	ENSMUST00000112231.9	ENSMUSG00000048120.17	Entpd1	chr19	protein_coding	ectonucleoside triphosphate diphosphohydrolase 1
chr19	40670272	40708901	+	40648344	40708901	A5SS	0.33	50	50	ENSMUST00000127828.8	ENSMUSG00000048120.17	Entpd1	chr19	protein_coding	ectonucleoside triphosphate diphosphohydrolase 1
chr19	40649307	40699607	+	40648771	40699607	A5SS	0.25	50	50	ENSMUST00000155988.2	ENSMUSG00000048120.17	Entpd1	chr19	protein_coding	ectonucleoside triphosphate diphosphohydrolase 1
chr19	40779833	40782999	+	40779833;40781320	40781228;40782999	ES	0.5	50	50	ENSMUST00000224596.2	ENSMUSG00000108929.3	Cc2d2b	chr19	protein_coding	coiled-coil and C2 domain containing 2B
chr19	40784261	40790798	+	40784261;40786748	40786620;40790798	ES	0.5	50	50	ENSMUST00000224596.2	ENSMUSG00000108929.3	Cc2d2b	chr19	protein_coding	coiled-coil and C2 domain containing 2B
chr19	40790894	40797374	+	40790894;40795358	40795260;40797374	ES	0.5	50	50	ENSMUST00000224596.2	ENSMUSG00000108929.3	Cc2d2b	chr19	protein_coding	coiled-coil and C2 domain containing 2B
chr19	40762954;40765847	40765731;40766490	+	40762954	40766490	cassetteExon	0.5	100	100	ENSMUST00000224596.2	ENSMUSG00000108929.3	Cc2d2b	chr19	protein_coding	coiled-coil and C2 domain containing 2B
chr19	40746751	40746864	+	40745995	40746864	A5SS	0.5	50	50	ENSMUST00000224596.2	ENSMUSG00000108929.3	Cc2d2b	chr19	protein_coding	coiled-coil and C2 domain containing 2B
chr19	40766848;40773567	40773390;40779630	+	40766848;40778891	40778753;40779630	MXE	0.5	100	100	ENSMUST00000207801.2	ENSMUSG00000108929.3	Cc2d2b	chr19	protein_coding	coiled-coil and C2 domain containing 2B
chr19	40804779	40811157	+	40804779	40815614	A3SS	0.5	50	50	ENSMUST00000207801.2	ENSMUSG00000108929.3	Cc2d2b	chr19	protein_coding	coiled-coil and C2 domain containing 2B
chr19	40776892	40778753	+	40766848	40778753	A5SS	0.5	50	50	ENSMUST00000207801.2	ENSMUSG00000108929.3	Cc2d2b	chr19	protein_coding	coiled-coil and C2 domain containing 2B
chr19	40813550	40815614	+	40804779	40815614	A5SS	0.5	50	50	ENSMUST00000207801.2	ENSMUSG00000108929.3	Cc2d2b	chr19	protein_coding	coiled-coil and C2 domain containing 2B
chr19	40773567	40774368	+	40773567	40779630	A3SS	0.5	50	50	ENSMUST00000207791.2	ENSMUSG00000108929.3	Cc2d2b	chr19	protein_coding	coiled-coil and C2 domain containing 2B
chr19	40778891	40779630	+	40773567	40779630	A5SS	0.5	50	50	ENSMUST00000207791.2	ENSMUSG00000108929.3	Cc2d2b	chr19	protein_coding	coiled-coil and C2 domain containing 2B
chr19	40856884	40859188	+	40856884	40864743	A3SS	0.5	50	50	ENSMUST00000236606.2	ENSMUSG00000097740.3	E030044B06Rik	chr19	lncRNA	RIKEN cDNA E030044B06 gene
chr19	40864842	40865181	+	40864842	40865280	A3SS	0.5	50	50	ENSMUST00000236606.2	ENSMUSG00000097740.3	E030044B06Rik	chr19	lncRNA	RIKEN cDNA E030044B06 gene
chr19	40865317	40870041	+	40865317	40869640	A3SS	0.5	50	50	ENSMUST00000236606.2	ENSMUSG00000097740.3	E030044B06Rik	chr19	lncRNA	RIKEN cDNA E030044B06 gene
chr19	40885609;40896647	40896503;40899477	+	40885609	40899477	cassetteExon	0.5	100	100	ENSMUST00000235235.2	ENSMUSG00000049164.8	Zfp518a	chr19	protein_coding	zinc finger protein 518A
chr19	40899553	40899942	+	40899553	40904792	A3SS	0.5	50	50	ENSMUST00000235235.2	ENSMUSG00000049164.8	Zfp518a	chr19	protein_coding	zinc finger protein 518A
chr19	40883234	40885528	+	40883230	40885528	A5SS	0.5	50	50	ENSMUST00000235235.2	ENSMUSG00000049164.8	Zfp518a	chr19	protein_coding	zinc finger protein 518A
chr19	40885609	40899477	+	40896647	40899477	5pMXE	0.5	50	50	ENSMUST00000235207.2	ENSMUSG00000049164.8	Zfp518a	chr19	protein_coding	zinc finger protein 518A
chr19	40926171	40927811	-	40926162	40927811	A3SS	0.5	50	50	ENSMUST00000117695.8	ENSMUSG00000061132.14	Blnk	chr19	protein_coding	B cell linker
chr19	41044282	41047505	+	41044282;41047065	41047006;41047505	ES	0.5	50	50	ENSMUST00000051806.12	ENSMUSG00000025014.14	Dntt	chr19	protein_coding	deoxynucleotidyltransferase, terminal
chr19	41031425	41032243	+	41031425	41034627	A3SS	0.5	50	50	ENSMUST00000051806.12	ENSMUSG00000025014.14	Dntt	chr19	protein_coding	deoxynucleotidyltransferase, terminal
chr19	41105789;41109848	41109775;41116900	-	41105789;41108734	41108610;41116900	MXE	0.5	100	100	ENSMUST00000025986.15	ENSMUSG00000025013.16	Tll2	chr19	protein_coding	tolloid-like 2
chr19	41544140	41570217	+	41544140	41546750	3pMXE	0.5	50	50	ENSMUST00000067795.13	ENSMUSG00000025019.18	Lcor	chr19	protein_coding	ligand dependent nuclear receptor corepressor
chr19	41471737	41471966	+	41471222	41471966	A5SS	0.5	50	50	ENSMUST00000067795.13	ENSMUSG00000025019.18	Lcor	chr19	protein_coding	ligand dependent nuclear receptor corepressor
chr19	41564398	41570217	+	41544140	41570217	A5SS	0.5	50	50	ENSMUST00000238398.2	ENSMUSG00000025019.18	Lcor	chr19	protein_coding	ligand dependent nuclear receptor corepressor
chr19	41641205	41715509	-	41641205;41709550	41709479;41715509	ES	0.5	50	50	ENSMUST00000169141.8	ENSMUSG00000025020.12	Slit1	chr19	protein_coding	slit guidance ligand 1
chr19	41589128	41590052	-	41589128	41589928	A5SS	0.5	50	50	ENSMUST00000025993.10	ENSMUSG00000025020.12	Slit1	chr19	protein_coding	slit guidance ligand 1
chr19	41758635	41762505	-	41758635;41761567	41761489;41762505	ES	0.5	50	50	ENSMUST00000026150.15	ENSMUSG00000025154.16	Arhgap19	chr19	protein_coding	Rho GTPase activating protein 19
chr19	41769743	41770770	-	41769788	41770770	A3SS	0.5	50	50	ENSMUST00000026150.15	ENSMUSG00000025154.16	Arhgap19	chr19	protein_coding	Rho GTPase activating protein 19
chr19	41916552	41919795	-	41913678	41919795	A3SS	0.5	50	50	ENSMUST00000112123.4	ENSMUSG00000034321.15	Exosc1	chr19	protein_coding	exosome component 1
chr19	41913678	41914971	-	41913678	41919795	A5SS	0.5	50	50	ENSMUST00000112123.4	ENSMUSG00000034321.15	Exosc1	chr19	protein_coding	exosome component 1
chr19	41922104	41926042	+	41922104;41923322	41923279;41926042	ES	0.5	50	50	ENSMUST00000224258.2	ENSMUSG00000025157.9	Zdhhc16	chr19	protein_coding	zinc finger, DHHC domain containing 16
chr19	41922104	41923177	+	41922104	41923279	A3SS	0.33	50	50	ENSMUST00000224258.2	ENSMUSG00000025157.9	Zdhhc16	chr19	protein_coding	zinc finger, DHHC domain containing 16
chr19	41922104	41926042	+	41922104;41923322	41923177;41926042	ES	0.5	50	50	ENSMUST00000026154.9	ENSMUSG00000025157.9	Zdhhc16	chr19	protein_coding	zinc finger, DHHC domain containing 16
chr19	41928172;41928343	41928296;41929089	+	41928172	41929089	cassetteExon	0.5	100	100	ENSMUST00000026154.9	ENSMUSG00000025157.9	Zdhhc16	chr19	protein_coding	zinc finger, DHHC domain containing 16
chr19	41930445;41930663	41930569;41932021	+	41930445	41932021	cassetteExon	0.5	100	100	ENSMUST00000026154.9	ENSMUSG00000025157.9	Zdhhc16	chr19	protein_coding	zinc finger, DHHC domain containing 16
chr19	41926891	41927159	+	41926891	41927247	A3SS	0.33	50	50	ENSMUST00000026154.9	ENSMUSG00000025157.9	Zdhhc16	chr19	protein_coding	zinc finger, DHHC domain containing 16
chr19	41926891	41928127	+	41926891	41927247	A3SS&ES	0.33	50	50	ENSMUST00000026154.9	ENSMUSG00000025157.9	Zdhhc16	chr19	protein_coding	zinc finger, DHHC domain containing 16
chr19	41926551	41926803	+	41926656	41926803	A5SS	0.5	50	50	ENSMUST00000026154.9	ENSMUSG00000025157.9	Zdhhc16	chr19	protein_coding	zinc finger, DHHC domain containing 16
chr19	41926891	41927159	+	41926891	41928127	A3SS	0.33	50	50	ENSMUST00000224562.2	ENSMUSG00000025157.9	Zdhhc16	chr19	protein_coding	zinc finger, DHHC domain containing 16
chr19	41939290	41942108	-	41939290;41941001	41940846;41942108	ES	0.5	50	50	ENSMUST00000167927.8	ENSMUSG00000025159.9	Mms19	chr19	protein_coding	MMS19 cytosolic iron-sulfur assembly component
chr19	41942986	41943557	-	41942986;41943297	41943172;41943557	ES	0.5	50	50	ENSMUST00000167927.8	ENSMUSG00000025159.9	Mms19	chr19	protein_coding	MMS19 cytosolic iron-sulfur assembly component
chr19	41951300	41951840	-	41951300;41951517	41951389;41951840	ES	0.33	50	50	ENSMUST00000167927.8	ENSMUSG00000025159.9	Mms19	chr19	protein_coding	MMS19 cytosolic iron-sulfur assembly component
chr19	41951909	41952757	-	41951909;41952376	41952302;41952757	ES	0.5	50	50	ENSMUST00000167927.8	ENSMUSG00000025159.9	Mms19	chr19	protein_coding	MMS19 cytosolic iron-sulfur assembly component
chr19	41954753	41969438	-	41954753;41958190	41958142;41969438	ES	0.5	50	50	ENSMUST00000167927.8	ENSMUSG00000025159.9	Mms19	chr19	protein_coding	MMS19 cytosolic iron-sulfur assembly component
chr19	41934040	41934172	-	41934062	41934172	A3SS	0.5	50	50	ENSMUST00000167927.8	ENSMUSG00000025159.9	Mms19	chr19	protein_coding	MMS19 cytosolic iron-sulfur assembly component
chr19	41936334	41936655	-	41936185	41936655	A3SS	0.5	50	50	ENSMUST00000167927.8	ENSMUSG00000025159.9	Mms19	chr19	protein_coding	MMS19 cytosolic iron-sulfur assembly component
chr19	41939285	41940846	-	41939290	41940846	A3SS	0.5	50	50	ENSMUST00000167927.8	ENSMUSG00000025159.9	Mms19	chr19	protein_coding	MMS19 cytosolic iron-sulfur assembly component
chr19	41942453	41942905	-	41942456	41942905	A3SS	0.5	50	50	ENSMUST00000167927.8	ENSMUSG00000025159.9	Mms19	chr19	protein_coding	MMS19 cytosolic iron-sulfur assembly component
chr19	41944012	41944262	-	41944035	41944262	A3SS	0.5	50	50	ENSMUST00000167927.8	ENSMUSG00000025159.9	Mms19	chr19	protein_coding	MMS19 cytosolic iron-sulfur assembly component
chr19	41944422	41944948	-	41944400	41944948	A3SS	0.33	50	50	ENSMUST00000167927.8	ENSMUSG00000025159.9	Mms19	chr19	protein_coding	MMS19 cytosolic iron-sulfur assembly component
chr19	41951473	41951840	-	41951517	41951840	A3SS	0.33	50	50	ENSMUST00000167927.8	ENSMUSG00000025159.9	Mms19	chr19	protein_coding	MMS19 cytosolic iron-sulfur assembly component
chr19	41951897	41952302	-	41951909	41952302	A3SS	0.5	50	50	ENSMUST00000167927.8	ENSMUSG00000025159.9	Mms19	chr19	protein_coding	MMS19 cytosolic iron-sulfur assembly component
chr19	41951909	41952757	-	41951909	41952302	A5SS	0.5	50	50	ENSMUST00000170209.8	ENSMUSG00000025159.9	Mms19	chr19	protein_coding	MMS19 cytosolic iron-sulfur assembly component
chr19	41954753	41969438	-	41954753	41958142	5pMXE	0.5	50	50	ENSMUST00000163287.8	ENSMUSG00000025159.9	Mms19	chr19	protein_coding	MMS19 cytosolic iron-sulfur assembly component
chr19	41944400	41944948	-	41943635	41944948	A3SS	0.33	50	50	ENSMUST00000163287.8	ENSMUSG00000025159.9	Mms19	chr19	protein_coding	MMS19 cytosolic iron-sulfur assembly component
chr19	41944422	41944948	-	41943635	41944948	A3SS	0.33	50	50	ENSMUST00000163287.8	ENSMUSG00000025159.9	Mms19	chr19	protein_coding	MMS19 cytosolic iron-sulfur assembly component
chr19	41943635	41943858	-	41943635	41944948	A5SS	0.5	50	50	ENSMUST00000163287.8	ENSMUSG00000025159.9	Mms19	chr19	protein_coding	MMS19 cytosolic iron-sulfur assembly component
chr19	41951909	41952757	-	41952376	41952757	A3SS&ES	0.5	50	50	ENSMUST00000163398.8	ENSMUSG00000025159.9	Mms19	chr19	protein_coding	MMS19 cytosolic iron-sulfur assembly component
chr19	41951300;41951473	41951389;41951840	-	41951300	41951840	cassetteExon	0.5	100	100	ENSMUST00000026168.9	ENSMUSG00000025159.9	Mms19	chr19	protein_coding	MMS19 cytosolic iron-sulfur assembly component
chr19	41939290	41942108	-	41941001	41942108	A3SS&ES	0.5	50	50	ENSMUST00000169775.8	ENSMUSG00000025159.9	Mms19	chr19	protein_coding	MMS19 cytosolic iron-sulfur assembly component
chr19	41951300	41951840	-	41951300	41951389	5pMXE	0.5	50	50	ENSMUST00000169933.2	ENSMUSG00000025159.9	Mms19	chr19	protein_coding	MMS19 cytosolic iron-sulfur assembly component
chr19	41951300	41951840	-	41951517	41951840	3pMXE	0.33	50	50	ENSMUST00000169765.2	ENSMUSG00000025159.9	Mms19	chr19	protein_coding	MMS19 cytosolic iron-sulfur assembly component
chr19	42005745	42020328	+	41970447	42020328	A5SS	0.5	50	50	ENSMUST00000026170.3	ENSMUSG00000025171.3	Ubtd1	chr19	protein_coding	ubiquitin domain containing 1
chr19	42034549	42048327	+	42034549	42040411	3pMXE	0.33	50	50	ENSMUST00000168414.2	ENSMUSG00000025176.15	Hoga1	chr19	protein_coding	4-hydroxy-2-oxoglutarate aldolase 1
chr19	42034549	42051631	+	42034549	42040411	3pMXE	0.33	50	50	ENSMUST00000168414.2	ENSMUSG00000025176.15	Hoga1	chr19	protein_coding	4-hydroxy-2-oxoglutarate aldolase 1
chr19	42034549	42048327	+	42034549	42051631	A3SS	0.33	50	50	ENSMUST00000172244.8	ENSMUSG00000025176.15	Hoga1	chr19	protein_coding	4-hydroxy-2-oxoglutarate aldolase 1
chr19	42049838	42051631	+	42034549	42051631	A5SS	0.5	50	50	ENSMUST00000172244.8	ENSMUSG00000025176.15	Hoga1	chr19	protein_coding	4-hydroxy-2-oxoglutarate aldolase 1
chr19	42113465;42116933	42116742;42117310	-	42113465	42117310	cassetteExon	0.5	100	100	ENSMUST00000018965.4	ENSMUSG00000018821.4	Avpi1	chr19	protein_coding	arginine vasopressin-induced 1
chr19	42159107	42159985	+	42152489	42159985	A5SS	0.33	50	50	ENSMUST00000164455.2	ENSMUSG00000018820.14	Zfyve27	chr19	protein_coding	zinc finger, FYVE domain containing 27
chr19	42159224	42159985	+	42152489	42159985	A5SS	0.33	50	50	ENSMUST00000164455.2	ENSMUSG00000018820.14	Zfyve27	chr19	protein_coding	zinc finger, FYVE domain containing 27
chr19	42172628	42174244	+	42172628;42174079	42174059;42174244	ES	0.5	50	50	ENSMUST00000169536.8	ENSMUSG00000018820.14	Zfyve27	chr19	protein_coding	zinc finger, FYVE domain containing 27
chr19	42159107	42159985	+	42159224	42159985	A5SS	0.33	50	50	ENSMUST00000169536.8	ENSMUSG00000018820.14	Zfyve27	chr19	protein_coding	zinc finger, FYVE domain containing 27
chr19	42167355	42167728	+	42165898	42167728	A5SS	0.5	50	50	ENSMUST00000169536.8	ENSMUSG00000018820.14	Zfyve27	chr19	protein_coding	zinc finger, FYVE domain containing 27
chr19	42172628	42174244	+	42174079	42174244	5pMXE	0.5	50	50	ENSMUST00000170184.2	ENSMUSG00000018820.14	Zfyve27	chr19	protein_coding	zinc finger, FYVE domain containing 27
chr19	42272705	42276292	-	42272705;42275654	42275612;42276292	ES	0.5	50	50	ENSMUST00000238290.2	ENSMUSG00000042401.9	Crtac1	chr19	protein_coding	cartilage acidic protein 1
chr19	42272119	42272562	-	42256915	42272562	A3SS	0.5	50	50	ENSMUST00000238290.2	ENSMUSG00000042401.9	Crtac1	chr19	protein_coding	cartilage acidic protein 1
chr19	42507296	42564465	+	42507296;42552780	42550991;42564465	ES	0.33	50	50	ENSMUST00000026188.10	ENSMUSG00000025184.11	R3hcc1l	chr19	protein_coding	R3H domain and coiled-coil containing 1 like
chr19	42551514	42564465	+	42552780	42564465	A5SS	0.33	50	50	ENSMUST00000026188.10	ENSMUSG00000025184.11	R3hcc1l	chr19	protein_coding	R3H domain and coiled-coil containing 1 like
chr19	42507296	42550991	+	42507296	42564465	A3SS	0.5	50	50	ENSMUST00000160107.2	ENSMUSG00000025184.11	R3hcc1l	chr19	protein_coding	R3H domain and coiled-coil containing 1 like
chr19	42551514	42564465	+	42507296	42564465	A5SS	0.33	50	50	ENSMUST00000160107.2	ENSMUSG00000025184.11	R3hcc1l	chr19	protein_coding	R3H domain and coiled-coil containing 1 like
chr19	42552780	42564465	+	42507296	42564465	A5SS	0.33	50	50	ENSMUST00000160107.2	ENSMUSG00000025184.11	R3hcc1l	chr19	protein_coding	R3H domain and coiled-coil containing 1 like
chr19	42507296	42564465	+	42507296;42551514	42550991;42564465	ES	0.33	50	50	ENSMUST00000160893.2	ENSMUSG00000025184.11	R3hcc1l	chr19	protein_coding	R3H domain and coiled-coil containing 1 like
chr19	42548255	42551411	-	42548255;42551243	42551069;42551411	ES	0.5	50	50	ENSMUST00000160992.8	ENSMUSG00000090117.8	Gm16541	chr19	lncRNA	predicted gene 16541
chr19	42548255	42551411	-	42551243	42551411	3pMXE	0.5	50	50	ENSMUST00000162829.2	ENSMUSG00000090117.8	Gm16541	chr19	lncRNA	predicted gene 16541
chr19	42596986;42599167	42599073;42601157	-	42596986	42601157	cassetteExon	0.5	100	100	ENSMUST00000026190.14	ENSMUSG00000025185.15	Loxl4	chr19	protein_coding	lysyl oxidase-like 4
chr19	42590368	42590612	-	42588559	42590612	A3SS	0.5	50	50	ENSMUST00000026190.14	ENSMUSG00000025185.15	Loxl4	chr19	protein_coding	lysyl oxidase-like 4
chr19	42592757	42593246	-	42592754	42593246	A3SS	0.5	50	50	ENSMUST00000026190.14	ENSMUSG00000025185.15	Loxl4	chr19	protein_coding	lysyl oxidase-like 4
chr19	42736029	42737823	-	42736047	42737823	A3SS	0.33	50	50	ENSMUST00000236659.2	ENSMUSG00000060224.5	Pyroxd2	chr19	protein_coding	pyridine nucleotide-disulphide oxidoreductase domain 2
chr19	42736092	42737823	-	42736047	42737823	A3SS	0.33	50	50	ENSMUST00000236659.2	ENSMUSG00000060224.5	Pyroxd2	chr19	protein_coding	pyridine nucleotide-disulphide oxidoreductase domain 2
chr19	42736092	42737823	-	42736029	42737823	A3SS	0.33	50	50	ENSMUST00000076505.4	ENSMUSG00000060224.5	Pyroxd2	chr19	protein_coding	pyridine nucleotide-disulphide oxidoreductase domain 2
chr19	42747746	42748145	-	42746345	42748145	A3SS	0.5	50	50	ENSMUST00000162004.8	ENSMUSG00000025188.16	Hps1	chr19	protein_coding	HPS1, biogenesis of lysosomal organelles complex 3 subunit 1
chr19	42766677	42766993	-	42766722	42766993	A3SS	0.5	50	50	ENSMUST00000162004.8	ENSMUSG00000025188.16	Hps1	chr19	protein_coding	HPS1, biogenesis of lysosomal organelles complex 3 subunit 1
chr19	42744779	42746104	-	42744779	42746232	A5SS	0.5	50	50	ENSMUST00000162004.8	ENSMUSG00000025188.16	Hps1	chr19	protein_coding	HPS1, biogenesis of lysosomal organelles complex 3 subunit 1
chr19	42754655	42755125	-	42754655	42755149	A5SS	0.5	50	50	ENSMUST00000162004.8	ENSMUSG00000025188.16	Hps1	chr19	protein_coding	HPS1, biogenesis of lysosomal organelles complex 3 subunit 1
chr19	42767085	42768177	-	42767085	42768353	A5SS	0.5	50	50	ENSMUST00000162004.8	ENSMUSG00000025188.16	Hps1	chr19	protein_coding	HPS1, biogenesis of lysosomal organelles complex 3 subunit 1
chr19	43282803	43376461	-	43282803;43373337	43373180;43376461	ES	0.5	50	50	ENSMUST00000099428.5	ENSMUSG00000074852.5	Hpse2	chr19	protein_coding	heparanase 2
chr19	43460863	43473284	+	43460863;43464681	43464619;43473284	ES	0.5	50	50	ENSMUST00000223787.2	ENSMUSG00000025189.10	Cnnm1	chr19	protein_coding	cyclin M1
chr19	43460387	43465656	+	43460387	43460816	A3SS&ES	0.5	50	50	ENSMUST00000223787.2	ENSMUSG00000025189.10	Cnnm1	chr19	protein_coding	cyclin M1
chr19	43460175	43460288	+	43458217	43460288	A5SS	0.5	50	50	ENSMUST00000223787.2	ENSMUSG00000025189.10	Cnnm1	chr19	protein_coding	cyclin M1
chr19	43493126	43495361	-	43493126;43493365	43493215;43495361	ES	0.5	50	50	ENSMUST00000026196.14	ENSMUSG00000025190.14	Got1	chr19	protein_coding	glutamic-oxaloacetic transaminase 1, soluble
chr19	43501082	43504120	-	43496432	43504120	A3SS	0.5	50	50	ENSMUST00000026196.14	ENSMUSG00000025190.14	Got1	chr19	protein_coding	glutamic-oxaloacetic transaminase 1, soluble
chr19	43654267	43655354	-	43654267;43654416	43654352;43655354	ES	0.5	50	50	ENSMUST00000237364.2	ENSMUSG00000040414.9	Slc25a28	chr19	protein_coding	solute carrier family 25, member 28
chr19	43654267	43662915	-	43654267;43655582	43655354;43662915	ES	0.5	50	50	ENSMUST00000046038.9	ENSMUSG00000040414.9	Slc25a28	chr19	protein_coding	solute carrier family 25, member 28
chr19	43654267	43662915	-	43655582	43662915	A3SS	0.5	50	50	ENSMUST00000235953.2	ENSMUSG00000040414.9	Slc25a28	chr19	protein_coding	solute carrier family 25, member 28
chr19	43654267	43654352	-	43654267	43662915	A5SS	0.33	50	50	ENSMUST00000236433.2	ENSMUSG00000040414.9	Slc25a28	chr19	protein_coding	solute carrier family 25, member 28
chr19	43741659	43744065	+	43741659	43744059	A3SS	0.5	50	50	ENSMUST00000026199.14	ENSMUSG00000025193.15	Cutc	chr19	protein_coding	cutC copper transporter
chr19	43749163	43751312	+	43749163	43751342	A3SS	0.5	50	50	ENSMUST00000026199.14	ENSMUSG00000025193.15	Cutc	chr19	protein_coding	cutC copper transporter
chr19	43857443;43858045	43858028;43858601	-	43857443	43858601	cassetteExon	0.5	100	100	ENSMUST00000212396.2	ENSMUSG00000025195.10	Dnmbp	chr19	protein_coding	dynamin binding protein
chr19	43914055	43928556	-	43900828	43928556	A3SS	0.5	50	50	ENSMUST00000212396.2	ENSMUSG00000025195.10	Dnmbp	chr19	protein_coding	dynamin binding protein
chr19	43858748	43862597	-	43858748	43862567	A5SS	0.5	50	50	ENSMUST00000212396.2	ENSMUSG00000025195.10	Dnmbp	chr19	protein_coding	dynamin binding protein
chr19	43863459	43868052	-	43863459	43889509	A5SS	0.33	50	50	ENSMUST00000212396.2	ENSMUSG00000025195.10	Dnmbp	chr19	protein_coding	dynamin binding protein
chr19	43863459	43877749	-	43863459	43889509	A5SS	0.33	50	50	ENSMUST00000212396.2	ENSMUSG00000025195.10	Dnmbp	chr19	protein_coding	dynamin binding protein
chr19	43863459	43877749	-	43863459	43868052	5pMXE	0.33	50	50	ENSMUST00000212592.2	ENSMUSG00000025195.10	Dnmbp	chr19	protein_coding	dynamin binding protein
chr19	44047585	44056039	-	44051504	44056039	A3SS&ES	0.33	50	50	ENSMUST00000170801.8	ENSMUSG00000025198.17	Erlin1	chr19	protein_coding	ER lipid raft associated 1
chr19	44057834	44058038	-	44057834	44058028	A5SS	0.33	50	50	ENSMUST00000071698.13	ENSMUSG00000025198.17	Erlin1	chr19	protein_coding	ER lipid raft associated 1
chr19	44057834	44058130	-	44057834	44058028	A5SS	0.33	50	50	ENSMUST00000071698.13	ENSMUSG00000025198.17	Erlin1	chr19	protein_coding	ER lipid raft associated 1
chr19	44057834	44058038	-	44057834	44058130	A5SS	0.33	50	50	ENSMUST00000112028.10	ENSMUSG00000025198.17	Erlin1	chr19	protein_coding	ER lipid raft associated 1
chr19	44047585	44056039	-	44047615	44056039	A3SS	0.33	50	50	ENSMUST00000171952.2	ENSMUSG00000025198.17	Erlin1	chr19	protein_coding	ER lipid raft associated 1
chr19	44051504	44056039	-	44047615	44056039	A3SS	0.33	50	50	ENSMUST00000171952.2	ENSMUSG00000025198.17	Erlin1	chr19	protein_coding	ER lipid raft associated 1
chr19	44047615	44050282	-	44047615	44056039	A5SS	0.5	50	50	ENSMUST00000171952.2	ENSMUSG00000025198.17	Erlin1	chr19	protein_coding	ER lipid raft associated 1
chr19	44067705	44070385	-	44067424	44070385	A3SS	0.5	50	50	ENSMUST00000026217.11	ENSMUSG00000025199.17	Chuk	chr19	protein_coding	conserved helix-loop-helix ubiquitous kinase
chr19	44063969	44065702	-	44063969	44065685	A5SS	0.5	50	50	ENSMUST00000026217.11	ENSMUSG00000025199.17	Chuk	chr19	protein_coding	conserved helix-loop-helix ubiquitous kinase
chr19	44092191	44095656	-	44092191	44095727	A5SS	0.5	50	50	ENSMUST00000026217.11	ENSMUSG00000025199.17	Chuk	chr19	protein_coding	conserved helix-loop-helix ubiquitous kinase
chr19	44099099;44099860	44099770;44101388	-	44099099	44101388	cassetteExon	0.5	100	100	ENSMUST00000026218.7	ENSMUSG00000025200.8	Cwf19l1	chr19	protein_coding	CWF19-like 1, cell cycle control (S. pombe)
chr19	44120587	44121439	-	44120603	44121439	A3SS	0.5	50	50	ENSMUST00000026218.7	ENSMUSG00000025200.8	Cwf19l1	chr19	protein_coding	CWF19-like 1, cell cycle control (S. pombe)
chr19	44110399	44110599	-	44110399	44111583	A5SS	0.5	50	50	ENSMUST00000026218.7	ENSMUSG00000025200.8	Cwf19l1	chr19	protein_coding	CWF19-like 1, cell cycle control (S. pombe)
chr19	44113331	44115856	-	44113331	44115805	A5SS	0.5	50	50	ENSMUST00000026218.7	ENSMUSG00000025200.8	Cwf19l1	chr19	protein_coding	CWF19-like 1, cell cycle control (S. pombe)
chr19	44115923	44117665	-	44115923	44117637	A5SS	0.5	50	50	ENSMUST00000026218.7	ENSMUSG00000025200.8	Cwf19l1	chr19	protein_coding	CWF19-like 1, cell cycle control (S. pombe)
chr19	44121523	44121721	-	44121523	44124205	A5SS	0.33	50	50	ENSMUST00000026218.7	ENSMUSG00000025200.8	Cwf19l1	chr19	protein_coding	CWF19-like 1, cell cycle control (S. pombe)
chr19	44121523	44121895	-	44121523	44124205	A5SS	0.33	50	50	ENSMUST00000026218.7	ENSMUSG00000025200.8	Cwf19l1	chr19	protein_coding	CWF19-like 1, cell cycle control (S. pombe)
chr19	44121523	44121721	-	44121523	44121895	A5SS	0.5	50	50	ENSMUST00000237067.2	ENSMUSG00000025200.8	Cwf19l1	chr19	protein_coding	CWF19-like 1, cell cycle control (S. pombe)
chr19	44131579;44134496	44134380;44134798	-	44131579	44134798	cassetteExon	0.5	100	100	ENSMUST00000237630.2	ENSMUSG00000057506.6	Bloc1s2	chr19	protein_coding	biogenesis of lysosomal organelles complex-1, subunit 2
chr19	44130466	44130563	-	44128152	44130563	A3SS	0.5	50	50	ENSMUST00000237630.2	ENSMUSG00000057506.6	Bloc1s2	chr19	protein_coding	biogenesis of lysosomal organelles complex-1, subunit 2
chr19	44131579	44134798	-	44134496	44134798	3pMXE	0.5	50	50	ENSMUST00000236380.2	ENSMUSG00000057506.6	Bloc1s2	chr19	protein_coding	biogenesis of lysosomal organelles complex-1, subunit 2
chr19	44226316	44226815	+	44224415	44226815	A5SS	0.5	50	50	ENSMUST00000026220.7	ENSMUSG00000025202.9	Scd3	chr19	protein_coding	stearoyl-coenzyme A desaturase 3
chr19	44524692	44532140	-	44524692;44531828	44531705;44532140	ES	0.5	50	50	ENSMUST00000063632.14	ENSMUSG00000051984.14	Sec31b	chr19	protein_coding	Sec31 homolog B (S. cerevisiae)
chr19	44532251	44541137	-	44532251	44534227	5pMXE	0.5	50	50	ENSMUST00000063632.14	ENSMUSG00000051984.14	Sec31b	chr19	protein_coding	Sec31 homolog B (S. cerevisiae)
chr19	44507926	44508862	-	44507103	44508862	A3SS	0.5	50	50	ENSMUST00000165758.2	ENSMUSG00000051984.14	Sec31b	chr19	protein_coding	Sec31 homolog B (S. cerevisiae)
chr19	44507103	44507340	-	44507103	44508862	A5SS	0.5	50	50	ENSMUST00000165758.2	ENSMUSG00000051984.14	Sec31b	chr19	protein_coding	Sec31 homolog B (S. cerevisiae)
chr19	44538659	44541137	-	44532251	44541137	A3SS	0.33	50	50	ENSMUST00000166808.2	ENSMUSG00000091471.2	Gm20538	chr19	protein_coding	predicted gene 20538
chr19	44538851	44541137	-	44532251	44541137	A3SS	0.33	50	50	ENSMUST00000166808.2	ENSMUSG00000091471.2	Gm20538	chr19	protein_coding	predicted gene 20538
chr19	44538851	44541137	-	44538659	44541137	A3SS	0.33	50	50	ENSMUST00000171415.8	ENSMUSG00000025204.11	Ndufb8	chr19	protein_coding	NADH:ubiquinone oxidoreductase subunit B8
chr19	44543453	44543756	-	44543496	44543756	A3SS	0.5	50	50	ENSMUST00000171415.8	ENSMUSG00000025204.11	Ndufb8	chr19	protein_coding	NADH:ubiquinone oxidoreductase subunit B8
chr19	44543496	44543666	-	44543496	44543756	A5SS	0.5	50	50	ENSMUST00000171415.8	ENSMUSG00000025204.11	Ndufb8	chr19	protein_coding	NADH:ubiquinone oxidoreductase subunit B8
chr19	44608882	44625291	+	44608882;44611664	44611477;44625291	ES	0.5	50	50	ENSMUST00000235282.2	ENSMUSG00000117911.2	Gm35460	chr19	lncRNA	predicted gene, 35460
chr19	44626708;44628098	44627963;44634592	+	44626708	44634592	cassetteExon	0.5	100	100	ENSMUST00000235282.2	ENSMUSG00000117911.2	Gm35460	chr19	lncRNA	predicted gene, 35460
chr19	44603329	44608812	+	44603329	44608843	A3SS	0.5	50	50	ENSMUST00000235282.2	ENSMUSG00000117911.2	Gm35460	chr19	lncRNA	predicted gene, 35460
chr19	44681735	44683687	-	44676082	44683687	A3SS	0.5	50	50	ENSMUST00000237685.2	ENSMUSG00000097683.3	Gm26644	chr19	lncRNA	predicted gene, 26644
chr19	44730245	44731022	+	44730245;44730834	44730498;44731022	ES	0.5	50	50	ENSMUST00000236936.2	ENSMUSG00000117823.2	Gm35610	chr19	lncRNA	predicted gene, 35610
chr19	44779241;44785135	44785067;44804347	+	44779241	44804347	cassetteExon	0.5	100	100	ENSMUST00000174490.9	ENSMUSG00000004231.16	Pax2	chr19	protein_coding	paired box 2
chr19	44745875	44749317	+	44745875	44749314	A3SS	0.5	50	50	ENSMUST00000174490.9	ENSMUSG00000004231.16	Pax2	chr19	protein_coding	paired box 2
chr19	44779217	44804347	+	44779241	44804347	A5SS	0.33	50	50	ENSMUST00000174490.9	ENSMUSG00000004231.16	Pax2	chr19	protein_coding	paired box 2
chr19	44779217	44804347	+	44785135	44804347	A5SS&ES	0.33	50	50	ENSMUST00000004340.11	ENSMUSG00000004231.16	Pax2	chr19	protein_coding	paired box 2
chr19	44931378	44931888	+	44930865	44931888	A5SS	0.5	50	50	ENSMUST00000096053.5	ENSMUSG00000036097.9	Slf2	chr19	protein_coding	SMC5-SMC6 complex localization factor 2
chr19	44960810	44961442	-	44953385	44961442	A3SS	0.5	50	50	ENSMUST00000235330.2	ENSMUSG00000118204.2	4930414N06Rik	chr19	lncRNA	RIKEN cDNA 4930414N06 gene
chr19	44977796;44979797	44979612;44980577	+	44977796	44980577	cassetteExon	0.5	100	100	ENSMUST00000026225.15	ENSMUSG00000025207.17	Sema4g	chr19	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
chr19	44978118	44980577	+	44977796	44980577	A5SS	0.33	50	50	ENSMUST00000026225.15	ENSMUSG00000025207.17	Sema4g	chr19	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
chr19	44978118	44980577	+	44979797	44980577	A5SS&ES	0.33	50	50	ENSMUST00000236662.2	ENSMUSG00000025207.17	Sema4g	chr19	protein_coding	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
chr19	44996814	44997719	+	44994626	44997719	A5SS	0.5	50	50	ENSMUST00000236685.2	ENSMUSG00000025209.6	Twnk	chr19	protein_coding	twinkle mtDNA helicase
chr19	45002984;45003752	45003601;45009826	+	45002984;45003392	45003293;45009826	MXE	0.5	100	100	ENSMUST00000237148.2	ENSMUSG00000035342.15	Lzts2	chr19	protein_coding	leucine zipper, putative tumor suppressor 2
chr19	45002984;45003762	45003601;45009826	+	45002984;45003392	45003293;45009826	MXE	0.5	100	100	ENSMUST00000237148.2	ENSMUSG00000035342.15	Lzts2	chr19	protein_coding	leucine zipper, putative tumor suppressor 2
chr19	45006669	45009826	+	45003392	45009826	A5SS	0.2	50	50	ENSMUST00000237148.2	ENSMUSG00000035342.15	Lzts2	chr19	protein_coding	leucine zipper, putative tumor suppressor 2
chr19	45009241	45009826	+	45003392	45009826	A5SS	0.2	50	50	ENSMUST00000237148.2	ENSMUSG00000035342.15	Lzts2	chr19	protein_coding	leucine zipper, putative tumor suppressor 2
chr19	45003762;45010275	45009826;45013158	+	45003762	45013158	cassetteExon	0.5	100	100	ENSMUST00000236512.2	ENSMUSG00000035342.15	Lzts2	chr19	protein_coding	leucine zipper, putative tumor suppressor 2
chr19	45002984	45003293	+	45002984	45003601	A3SS	0.5	50	50	ENSMUST00000236512.2	ENSMUSG00000035342.15	Lzts2	chr19	protein_coding	leucine zipper, putative tumor suppressor 2
chr19	45012643	45013158	+	45003762	45013158	A5SS	0.33	50	50	ENSMUST00000236512.2	ENSMUSG00000035342.15	Lzts2	chr19	protein_coding	leucine zipper, putative tumor suppressor 2
chr19	45010275	45013158	+	45010275;45012643	45011981;45013158	ES	0.33	50	50	ENSMUST00000039016.14	ENSMUSG00000035342.15	Lzts2	chr19	protein_coding	leucine zipper, putative tumor suppressor 2
chr19	45003392	45009826	+	45003762	45009826	A5SS	0.2	50	50	ENSMUST00000039016.14	ENSMUSG00000035342.15	Lzts2	chr19	protein_coding	leucine zipper, putative tumor suppressor 2
chr19	45003752	45009826	+	45003762	45009826	A5SS	0.2	50	50	ENSMUST00000039016.14	ENSMUSG00000035342.15	Lzts2	chr19	protein_coding	leucine zipper, putative tumor suppressor 2
chr19	45003895	45011981	+	45010275	45011981	A5SS&ES	0.5	50	50	ENSMUST00000039016.14	ENSMUSG00000035342.15	Lzts2	chr19	protein_coding	leucine zipper, putative tumor suppressor 2
chr19	45006669	45009826	+	45003762	45009826	A5SS	0.2	50	50	ENSMUST00000039016.14	ENSMUSG00000035342.15	Lzts2	chr19	protein_coding	leucine zipper, putative tumor suppressor 2
chr19	45009241	45009826	+	45003762	45009826	A5SS	0.2	50	50	ENSMUST00000039016.14	ENSMUSG00000035342.15	Lzts2	chr19	protein_coding	leucine zipper, putative tumor suppressor 2
chr19	45003392	45009826	+	45003752	45009826	5pMXE	0.2	50	50	ENSMUST00000179108.9	ENSMUSG00000035342.15	Lzts2	chr19	protein_coding	leucine zipper, putative tumor suppressor 2
chr19	45006669	45009826	+	45003752	45009826	A5SS	0.2	50	50	ENSMUST00000179108.9	ENSMUSG00000035342.15	Lzts2	chr19	protein_coding	leucine zipper, putative tumor suppressor 2
chr19	45009241	45009826	+	45003752	45009826	A5SS	0.2	50	50	ENSMUST00000179108.9	ENSMUSG00000035342.15	Lzts2	chr19	protein_coding	leucine zipper, putative tumor suppressor 2
chr19	45010275	45013158	+	45012643	45013158	A5SS&ES	0.5	50	50	ENSMUST00000236377.2	ENSMUSG00000035342.15	Lzts2	chr19	protein_coding	leucine zipper, putative tumor suppressor 2
chr19	45006669	45009826	+	45009241	45009826	A5SS&ES	0.5	50	50	ENSMUST00000237396.2	ENSMUSG00000035342.15	Lzts2	chr19	protein_coding	leucine zipper, putative tumor suppressor 2
chr19	45010275	45011981	+	45010275	45013158	A3SS	0.5	50	50	ENSMUST00000237043.2	ENSMUSG00000035342.15	Lzts2	chr19	protein_coding	leucine zipper, putative tumor suppressor 2
chr19	45018510	45021451	-	45018510;45018728	45018637;45021451	ES	0.5	50	50	ENSMUST00000169459.4	ENSMUSG00000074818.14	Pdzd7	chr19	protein_coding	PDZ domain containing 7
chr19	45025565	45027606	-	45025565;45026038	45025978;45027606	ES	0.33	50	50	ENSMUST00000169459.4	ENSMUSG00000074818.14	Pdzd7	chr19	protein_coding	PDZ domain containing 7
chr19	45028774	45033857	-	45028774;45029142	45029002;45033857	ES	0.5	50	50	ENSMUST00000169459.4	ENSMUSG00000074818.14	Pdzd7	chr19	protein_coding	PDZ domain containing 7
chr19	45022124;45022456	45022362;45024496	-	45022124	45024496	cassetteExon	0.5	100	100	ENSMUST00000169459.4	ENSMUSG00000074818.14	Pdzd7	chr19	protein_coding	PDZ domain containing 7
chr19	45024722	45025170	-	45024693	45025170	A3SS	0.5	50	50	ENSMUST00000169459.4	ENSMUSG00000074818.14	Pdzd7	chr19	protein_coding	PDZ domain containing 7
chr19	45025647	45027606	-	45026038	45027606	A3SS&ES	0.33	50	50	ENSMUST00000169459.4	ENSMUSG00000074818.14	Pdzd7	chr19	protein_coding	PDZ domain containing 7
chr19	45025647	45027606	-	45025565	45027606	A3SS	0.33	50	50	ENSMUST00000237962.2	ENSMUSG00000074818.14	Pdzd7	chr19	protein_coding	PDZ domain containing 7
chr19	45036329	45037543	+	45036033	45037543	A5SS	0.33	50	50	ENSMUST00000237222.2	ENSMUSG00000025212.18	Sfxn3	chr19	protein_coding	sideroflexin 3
chr19	45036368	45037543	+	45036033	45037543	A5SS	0.33	50	50	ENSMUST00000237222.2	ENSMUSG00000025212.18	Sfxn3	chr19	protein_coding	sideroflexin 3
chr19	45038353;45038765	45038667;45039089	+	45038353	45039089	cassetteExon	0.5	100	100	ENSMUST00000111954.11	ENSMUSG00000025212.18	Sfxn3	chr19	protein_coding	sideroflexin 3
chr19	45036329	45037546	+	45036329	45037543	A3SS	0.5	50	50	ENSMUST00000111954.11	ENSMUSG00000025212.18	Sfxn3	chr19	protein_coding	sideroflexin 3
chr19	45036368	45037543	+	45036329	45037543	A5SS	0.33	50	50	ENSMUST00000111954.11	ENSMUSG00000025212.18	Sfxn3	chr19	protein_coding	sideroflexin 3
chr19	45038765	45039075	+	45038765	45039089	A3SS	0.5	50	50	ENSMUST00000062213.13	ENSMUSG00000025212.18	Sfxn3	chr19	protein_coding	sideroflexin 3
chr19	45038239	45038667	+	45038353	45038667	A5SS	0.5	50	50	ENSMUST00000062213.13	ENSMUSG00000025212.18	Sfxn3	chr19	protein_coding	sideroflexin 3
chr19	45075794	45091672	+	45077418	45091672	A5SS&ES	0.5	50	50	ENSMUST00000236133.2	ENSMUSG00000117848.2	Gm35867	chr19	lncRNA	predicted gene, 35867
chr19	45075794	45092449	+	45091828	45092449	A5SS&ES	0.5	50	50	ENSMUST00000236133.2	ENSMUSG00000117848.2	Gm35867	chr19	lncRNA	predicted gene, 35867
chr19	45075794;45091828	45091672;45092449	+	45075794	45092449	cassetteExon	0.5	100	100	ENSMUST00000236984.2	ENSMUSG00000117848.2	Gm35867	chr19	lncRNA	predicted gene, 35867
chr19	45064675	45065103	+	45064675	45065080	A3SS	0.5	50	50	ENSMUST00000111948.8	ENSMUSG00000025213.12	Kazald1	chr19	protein_coding	Kazal-type serine peptidase inhibitor domain 1
chr19	45139931;45141247	45141174;45141955	+	45139931	45141955	cassetteExon	0.5	100	100	ENSMUST00000026236.11	ENSMUSG00000025215.11	Tlx1	chr19	protein_coding	T cell leukemia, homeobox 1
chr19	45289199	45298356	-	45289199	45292251	5pMXE	0.2	50	50	ENSMUST00000238044.2	ENSMUSG00000100417.3	Gm28578	chr19	lncRNA	predicted gene 28578
chr19	45289199	45299925	-	45289199	45292251	5pMXE	0.2	50	50	ENSMUST00000238044.2	ENSMUSG00000100417.3	Gm28578	chr19	lncRNA	predicted gene 28578
chr19	45289199	45289582	-	45289199	45292251	A5SS	0.2	50	50	ENSMUST00000238044.2	ENSMUSG00000100417.3	Gm28578	chr19	lncRNA	predicted gene 28578
chr19	45289199	45291306	-	45289199	45292251	A5SS	0.2	50	50	ENSMUST00000238044.2	ENSMUSG00000100417.3	Gm28578	chr19	lncRNA	predicted gene 28578
chr19	45289199	45291306	-	45289199;45289799	45289582;45291306	ES	0.5	50	50	ENSMUST00000235789.2	ENSMUSG00000100417.3	Gm28578	chr19	lncRNA	predicted gene 28578
chr19	45300113	45326370	-	45300113;45326287	45326194;45326370	ES	0.5	50	50	ENSMUST00000235789.2	ENSMUSG00000100417.3	Gm28578	chr19	lncRNA	predicted gene 28578
chr19	45289199;45298442	45298356;45299925	-	45289199;45291389	45289582;45299925	MXE	0.5	100	100	ENSMUST00000235789.2	ENSMUSG00000100417.3	Gm28578	chr19	lncRNA	predicted gene 28578
chr19	45291389;45298442	45298356;45299925	-	45291389	45299925	cassetteExon	0.5	100	100	ENSMUST00000235789.2	ENSMUSG00000100417.3	Gm28578	chr19	lncRNA	predicted gene 28578
chr19	45319894	45326194	-	45300113	45326194	A3SS	0.25	50	50	ENSMUST00000235789.2	ENSMUSG00000100417.3	Gm28578	chr19	lncRNA	predicted gene 28578
chr19	45322450	45326194	-	45300113	45326194	A3SS	0.25	50	50	ENSMUST00000235789.2	ENSMUSG00000100417.3	Gm28578	chr19	lncRNA	predicted gene 28578
chr19	45324488	45326194	-	45300113	45326194	A3SS	0.25	50	50	ENSMUST00000235789.2	ENSMUSG00000100417.3	Gm28578	chr19	lncRNA	predicted gene 28578
chr19	45300113	45326703	-	45300113;45326560	45326370;45326703	ES	0.5	50	50	ENSMUST00000189827.3	ENSMUSG00000100417.3	Gm28578	chr19	lncRNA	predicted gene 28578
chr19	45289199;45291389	45291306;45299925	-	45289199	45299925	cassetteExon	0.5	100	100	ENSMUST00000189827.3	ENSMUSG00000100417.3	Gm28578	chr19	lncRNA	predicted gene 28578
chr19	45289199;45298442	45298356;45299925	-	45289199	45299925	cassetteExon	0.5	100	100	ENSMUST00000189827.3	ENSMUSG00000100417.3	Gm28578	chr19	lncRNA	predicted gene 28578
chr19	45289199	45289582	-	45289199	45299925	A5SS	0.2	50	50	ENSMUST00000189827.3	ENSMUSG00000100417.3	Gm28578	chr19	lncRNA	predicted gene 28578
chr19	45289199	45298356	-	45289199	45291306	5pMXE	0.2	50	50	ENSMUST00000187954.3	ENSMUSG00000100417.3	Gm28578	chr19	lncRNA	predicted gene 28578
chr19	45289199	45299925	-	45289199	45291306	5pMXE	0.2	50	50	ENSMUST00000187954.3	ENSMUSG00000100417.3	Gm28578	chr19	lncRNA	predicted gene 28578
chr19	45289199;45291389	45291306;45298356	-	45289199	45298356	cassetteExon	0.5	100	100	ENSMUST00000186981.3	ENSMUSG00000100417.3	Gm28578	chr19	lncRNA	predicted gene 28578
chr19	45289199;45291389	45291306;45299925	-	45289199;45298442	45298356;45299925	MXE	0.5	100	100	ENSMUST00000186981.3	ENSMUSG00000100417.3	Gm28578	chr19	lncRNA	predicted gene 28578
chr19	45300113;45326560	45326194;45326703	-	45300113	45326703	cassetteExon	0.5	100	100	ENSMUST00000186981.3	ENSMUSG00000100417.3	Gm28578	chr19	lncRNA	predicted gene 28578
chr19	45289199	45289582	-	45289199	45298356	A5SS	0.2	50	50	ENSMUST00000186981.3	ENSMUSG00000100417.3	Gm28578	chr19	lncRNA	predicted gene 28578
chr19	45298442	45299411	-	45298442	45299925	A5SS	0.5	50	50	ENSMUST00000186981.3	ENSMUSG00000100417.3	Gm28578	chr19	lncRNA	predicted gene 28578
chr19	45319894	45326194	-	45322450	45326194	A3SS&ES	0.33	50	50	ENSMUST00000236436.2	ENSMUSG00000100417.3	Gm28578	chr19	lncRNA	predicted gene 28578
chr19	45324488	45326194	-	45322450	45326194	A3SS	0.33	50	50	ENSMUST00000236436.2	ENSMUSG00000100417.3	Gm28578	chr19	lncRNA	predicted gene 28578
chr19	45318604	45318956	-	45318604	45319029	A5SS	0.5	50	50	ENSMUST00000236436.2	ENSMUSG00000100417.3	Gm28578	chr19	lncRNA	predicted gene 28578
chr19	45324488	45326194	-	45319894	45326194	A3SS	0.33	50	50	ENSMUST00000189196.2	ENSMUSG00000100417.3	Gm28578	chr19	lncRNA	predicted gene 28578
chr19	45300113	45326703	-	45326560	45326703	3pMXE	0.5	50	50	ENSMUST00000187727.2	ENSMUSG00000100417.3	Gm28578	chr19	lncRNA	predicted gene 28578
chr19	45352325	45394984	+	45352325	45491371	A3SS	0.25	50	50	ENSMUST00000223764.2	ENSMUSG00000025217.16	Btrc	chr19	protein_coding	beta-transducin repeat containing protein
chr19	45352325	45411572	+	45352325	45491371	A3SS	0.25	50	50	ENSMUST00000223764.2	ENSMUSG00000025217.16	Btrc	chr19	protein_coding	beta-transducin repeat containing protein
chr19	45352325	45444972	+	45352325	45491371	A3SS	0.25	50	50	ENSMUST00000223764.2	ENSMUSG00000025217.16	Btrc	chr19	protein_coding	beta-transducin repeat containing protein
chr19	45459543	45491371	+	45352325	45491371	A5SS	0.5	50	50	ENSMUST00000223764.2	ENSMUSG00000025217.16	Btrc	chr19	protein_coding	beta-transducin repeat containing protein
chr19	45352325	45444972	+	45352325;45411679	45411572;45444972	ES	0.2	50	50	ENSMUST00000065601.13	ENSMUSG00000025217.16	Btrc	chr19	protein_coding	beta-transducin repeat containing protein
chr19	45352325;45395025	45394984;45411572	+	45352325	45411572	cassetteExon	0.5	100	100	ENSMUST00000065601.13	ENSMUSG00000025217.16	Btrc	chr19	protein_coding	beta-transducin repeat containing protein
chr19	45411679	45425776	+	45411679	45444972	A3SS	0.5	50	50	ENSMUST00000065601.13	ENSMUSG00000025217.16	Btrc	chr19	protein_coding	beta-transducin repeat containing protein
chr19	45352581	45444972	+	45411679	45444972	A5SS&ES	0.2	50	50	ENSMUST00000065601.13	ENSMUSG00000025217.16	Btrc	chr19	protein_coding	beta-transducin repeat containing protein
chr19	45434126	45444972	+	45411679	45444972	A5SS	0.2	50	50	ENSMUST00000065601.13	ENSMUSG00000025217.16	Btrc	chr19	protein_coding	beta-transducin repeat containing protein
chr19	45440947	45444972	+	45411679	45444972	A5SS	0.2	50	50	ENSMUST00000065601.13	ENSMUSG00000025217.16	Btrc	chr19	protein_coding	beta-transducin repeat containing protein
chr19	45352713	45394984	+	45352325	45394984	A5SS	0.5	50	50	ENSMUST00000225662.2	ENSMUSG00000025217.16	Btrc	chr19	protein_coding	beta-transducin repeat containing protein
chr19	45352325	45394984	+	45352325	45444972	A3SS	0.25	50	50	ENSMUST00000111936.4	ENSMUSG00000025217.16	Btrc	chr19	protein_coding	beta-transducin repeat containing protein
chr19	45352581	45444972	+	45352325	45444972	A5SS	0.2	50	50	ENSMUST00000111936.4	ENSMUSG00000025217.16	Btrc	chr19	protein_coding	beta-transducin repeat containing protein
chr19	45434126	45444972	+	45352325	45444972	A5SS	0.2	50	50	ENSMUST00000111936.4	ENSMUSG00000025217.16	Btrc	chr19	protein_coding	beta-transducin repeat containing protein
chr19	45440947	45444972	+	45352325	45444972	A5SS	0.2	50	50	ENSMUST00000111936.4	ENSMUSG00000025217.16	Btrc	chr19	protein_coding	beta-transducin repeat containing protein
chr19	45434126	45444972	+	45352581	45444972	A5SS	0.2	50	50	ENSMUST00000223684.2	ENSMUSG00000025217.16	Btrc	chr19	protein_coding	beta-transducin repeat containing protein
chr19	45440947	45444972	+	45352581	45444972	A5SS	0.2	50	50	ENSMUST00000223684.2	ENSMUSG00000025217.16	Btrc	chr19	protein_coding	beta-transducin repeat containing protein
chr19	45434126	45438919	+	45434126	45444972	A3SS	0.5	50	50	ENSMUST00000224478.2	ENSMUSG00000025217.16	Btrc	chr19	protein_coding	beta-transducin repeat containing protein
chr19	45440947	45444972	+	45434126	45444972	A5SS	0.2	50	50	ENSMUST00000224478.2	ENSMUSG00000025217.16	Btrc	chr19	protein_coding	beta-transducin repeat containing protein
chr19	45549146;45549523	45549426;45553350	+	45549146	45553350	cassetteExon	0.5	100	100	ENSMUST00000047057.9	ENSMUSG00000041035.10	Gm17018	chr19	protein_coding	predicted gene 17018
chr19	45563789	45565432	+	45560977	45565432	A5SS	0.33	50	50	ENSMUST00000047057.9	ENSMUSG00000041035.10	Gm17018	chr19	protein_coding	predicted gene 17018
chr19	45563982	45565432	+	45560977	45565432	A5SS	0.33	50	50	ENSMUST00000047057.9	ENSMUSG00000041035.10	Gm17018	chr19	protein_coding	predicted gene 17018
chr19	45563982	45565432	+	45563789	45565432	A5SS	0.33	50	50	ENSMUST00000237600.2	ENSMUSG00000041035.10	Gm17018	chr19	protein_coding	predicted gene 17018
chr19	45567701	45580168	-	45567701;45568232	45568092;45580168	ES	0.33	50	50	ENSMUST00000160718.9	ENSMUSG00000040913.12	Fbxw4	chr19	protein_coding	F-box and WD-40 domain protein 4
chr19	45568232;45571240	45571155;45580168	-	45568232	45580168	cassetteExon	0.5	100	100	ENSMUST00000160718.9	ENSMUSG00000040913.12	Fbxw4	chr19	protein_coding	F-box and WD-40 domain protein 4
chr19	45567646	45568092	-	45567701	45568092	A3SS	0.5	50	50	ENSMUST00000160718.9	ENSMUSG00000040913.12	Fbxw4	chr19	protein_coding	F-box and WD-40 domain protein 4
chr19	45580233	45580980	-	45580233	45619304	A5SS	0.33	50	50	ENSMUST00000160718.9	ENSMUSG00000040913.12	Fbxw4	chr19	protein_coding	F-box and WD-40 domain protein 4
chr19	45580233	45581779	-	45580233	45619304	A5SS	0.33	50	50	ENSMUST00000160718.9	ENSMUSG00000040913.12	Fbxw4	chr19	protein_coding	F-box and WD-40 domain protein 4
chr19	45628960	45629113	-	45628960	45648215	A5SS	0.5	50	50	ENSMUST00000046869.11	ENSMUSG00000040913.12	Fbxw4	chr19	protein_coding	F-box and WD-40 domain protein 4
chr19	45567701	45580168	-	45568232	45580168	A3SS&ES	0.33	50	50	ENSMUST00000160018.8	ENSMUSG00000040913.12	Fbxw4	chr19	protein_coding	F-box and WD-40 domain protein 4
chr19	45580233	45580980	-	45580233	45581779	A5SS	0.33	50	50	ENSMUST00000160018.8	ENSMUSG00000040913.12	Fbxw4	chr19	protein_coding	F-box and WD-40 domain protein 4
chr19	45571240	45580168	-	45567701	45580168	A3SS	0.33	50	50	ENSMUST00000160003.8	ENSMUSG00000040913.12	Fbxw4	chr19	protein_coding	F-box and WD-40 domain protein 4
chr19	45567701	45580168	-	45567701	45568092	5pMXE	0.5	50	50	ENSMUST00000161039.2	ENSMUSG00000040913.12	Fbxw4	chr19	protein_coding	F-box and WD-40 domain protein 4
chr19	45730118	45730955	-	45730118;45730436	45730350;45730955	ES	0.33	50	50	ENSMUST00000026240.14	ENSMUSG00000025219.14	Fgf8	chr19	protein_coding	fibroblast growth factor 8
chr19	45730085	45730350	-	45730118	45730350	A3SS	0.5	50	50	ENSMUST00000026240.14	ENSMUSG00000025219.14	Fgf8	chr19	protein_coding	fibroblast growth factor 8
chr19	45730085	45730955	-	45730436	45730955	A3SS&ES	0.33	50	50	ENSMUST00000026240.14	ENSMUSG00000025219.14	Fgf8	chr19	protein_coding	fibroblast growth factor 8
chr19	45730118	45731092	-	45730118;45730991	45730955;45731092	ES	0.5	50	50	ENSMUST00000111928.8	ENSMUSG00000025219.14	Fgf8	chr19	protein_coding	fibroblast growth factor 8
chr19	45730085	45730955	-	45730118	45730955	A3SS	0.33	50	50	ENSMUST00000111928.8	ENSMUSG00000025219.14	Fgf8	chr19	protein_coding	fibroblast growth factor 8
chr19	45730118	45731092	-	45730991	45731092	A3SS&ES	0.5	50	50	ENSMUST00000026241.12	ENSMUSG00000025219.14	Fgf8	chr19	protein_coding	fibroblast growth factor 8
chr19	45730085	45730350	-	45730085	45730763	A5SS	0.33	50	50	ENSMUST00000026241.12	ENSMUSG00000025219.14	Fgf8	chr19	protein_coding	fibroblast growth factor 8
chr19	45730085	45730955	-	45730085	45730763	A5SS	0.33	50	50	ENSMUST00000026241.12	ENSMUSG00000025219.14	Fgf8	chr19	protein_coding	fibroblast growth factor 8
chr19	45730085;45730436	45730350;45730955	-	45730085	45730955	cassetteExon	0.5	100	100	ENSMUST00000111927.8	ENSMUSG00000025219.14	Fgf8	chr19	protein_coding	fibroblast growth factor 8
chr19	45730118	45730350	-	45730118	45731092	A5SS	0.33	50	50	ENSMUST00000111924.8	ENSMUSG00000025219.14	Fgf8	chr19	protein_coding	fibroblast growth factor 8
chr19	45730118	45730955	-	45730436	45730955	A3SS&ES	0.33	50	50	ENSMUST00000111925.2	ENSMUSG00000025219.14	Fgf8	chr19	protein_coding	fibroblast growth factor 8
chr19	45749647	45753889	-	45749647;45750709	45750624;45753889	ES	0.5	50	50	ENSMUST00000026243.5	ENSMUSG00000025220.9	Oga	chr19	protein_coding	O-GlcNAcase
chr19	45767522	45772134	-	45767522	45771371	5pMXE	0.5	50	50	ENSMUST00000026243.5	ENSMUSG00000025220.9	Oga	chr19	protein_coding	O-GlcNAcase
chr19	45749647	45753889	-	45749647	45750624	5pMXE	0.5	50	50	ENSMUST00000235508.2	ENSMUSG00000025220.9	Oga	chr19	protein_coding	O-GlcNAcase
chr19	45767522;45771631	45771371;45772134	-	45767522	45772134	cassetteExon	0.5	100	100	ENSMUST00000235936.2	ENSMUSG00000025220.9	Oga	chr19	protein_coding	O-GlcNAcase
chr19	45782156	45782440	-	45780496	45782440	A3SS	0.5	50	50	ENSMUST00000159210.9	ENSMUSG00000025221.17	Kcnip2	chr19	protein_coding	Kv channel-interacting protein 2
chr19	45782742	45783179	-	45782742;45783026	45782919;45783179	ES	0.5	50	50	ENSMUST00000239049.2	ENSMUSG00000025221.17	Kcnip2	chr19	protein_coding	Kv channel-interacting protein 2
chr19	45783026	45783417	-	45783026;45783249	45783179;45783417	ES	0.5	50	50	ENSMUST00000239049.2	ENSMUSG00000025221.17	Kcnip2	chr19	protein_coding	Kv channel-interacting protein 2
chr19	45784143	45800637	-	45784143	45791815	5pMXE	0.2	50	50	ENSMUST00000239049.2	ENSMUSG00000025221.17	Kcnip2	chr19	protein_coding	Kv channel-interacting protein 2
chr19	45784143	45804170	-	45784143	45791815	5pMXE	0.2	50	50	ENSMUST00000239049.2	ENSMUSG00000025221.17	Kcnip2	chr19	protein_coding	Kv channel-interacting protein 2
chr19	45784143	45784718	-	45784143	45791815	A5SS	0.2	50	50	ENSMUST00000239049.2	ENSMUSG00000025221.17	Kcnip2	chr19	protein_coding	Kv channel-interacting protein 2
chr19	45784143	45785530	-	45784143	45791815	A5SS	0.2	50	50	ENSMUST00000239049.2	ENSMUSG00000025221.17	Kcnip2	chr19	protein_coding	Kv channel-interacting protein 2
chr19	45784143	45804170	-	45784143;45785625	45784718;45804170	ES	0.5	50	50	ENSMUST00000111906.2	ENSMUSG00000025221.17	Kcnip2	chr19	protein_coding	Kv channel-interacting protein 2
chr19	45784143	45785530	-	45784143	45784718	A5SS	0.2	50	50	ENSMUST00000111906.2	ENSMUSG00000025221.17	Kcnip2	chr19	protein_coding	Kv channel-interacting protein 2
chr19	45784143	45800637	-	45784143	45784718	A5SS&ES	0.2	50	50	ENSMUST00000111906.2	ENSMUSG00000025221.17	Kcnip2	chr19	protein_coding	Kv channel-interacting protein 2
chr19	45784143	45804170	-	45784143;45785625	45785530;45804170	ES	0.5	50	50	ENSMUST00000079431.10	ENSMUSG00000025221.17	Kcnip2	chr19	protein_coding	Kv channel-interacting protein 2
chr19	45784143;45784771	45784718;45785530	-	45784143	45785530	cassetteExon	0.5	100	100	ENSMUST00000079431.10	ENSMUSG00000025221.17	Kcnip2	chr19	protein_coding	Kv channel-interacting protein 2
chr19	45784143	45800637	-	45784143	45785530	A5SS&ES	0.2	50	50	ENSMUST00000079431.10	ENSMUSG00000025221.17	Kcnip2	chr19	protein_coding	Kv channel-interacting protein 2
chr19	45784771	45785354	-	45784771	45785530	A5SS	0.5	50	50	ENSMUST00000162528.9	ENSMUSG00000025221.17	Kcnip2	chr19	protein_coding	Kv channel-interacting protein 2
chr19	45784143	45804170	-	45784143	45800637	5pMXE	0.2	50	50	ENSMUST00000086993.11	ENSMUSG00000025221.17	Kcnip2	chr19	protein_coding	Kv channel-interacting protein 2
chr19	45784143	45804170	-	45785625	45804170	A3SS&ES	0.5	50	50	ENSMUST00000026247.13	ENSMUSG00000025221.17	Kcnip2	chr19	protein_coding	Kv channel-interacting protein 2
chr19	45782742;45783249	45783179;45783417	-	45782742;45783026	45782919;45783417	MXE	0.5	100	100	ENSMUST00000159245.8	ENSMUSG00000025221.17	Kcnip2	chr19	protein_coding	Kv channel-interacting protein 2
chr19	45784143	45784718	-	45784143	45804170	A5SS	0.2	50	50	ENSMUST00000161886.9	ENSMUSG00000025221.17	Kcnip2	chr19	protein_coding	Kv channel-interacting protein 2
chr19	45907245	45910056	-	45880587	45910056	A3SS	0.5	50	50	ENSMUST00000045396.9	ENSMUSG00000039901.11	Armh3	chr19	protein_coding	armadillo-like helical domain containing 3
chr19	45987158	45987490	+	45987158	46001464	A3SS	0.5	50	50	ENSMUST00000181820.2	ENSMUSG00000097690.3	4930505N22Rik	chr19	lncRNA	RIKEN cDNA 4930505N22 gene
chr19	46021780	46022477	-	46021780	46022471	A5SS	0.5	50	50	ENSMUST00000156585.9	ENSMUSG00000025223.16	Ldb1	chr19	protein_coding	LIM domain binding 1
chr19	46024804	46027494	-	46024804	46033269	A5SS	0.5	50	50	ENSMUST00000156585.9	ENSMUSG00000025223.16	Ldb1	chr19	protein_coding	LIM domain binding 1
chr19	46050015	46051051	+	46050015	46050583	3pMXE	0.33	50	50	ENSMUST00000134015.2	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46050015	46050580	+	46050015	46050583	A3SS	0.33	50	50	ENSMUST00000134015.2	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46045182	46049842	+	46033501	46049842	A5SS	0.16	50	50	ENSMUST00000134015.2	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46045298	46049842	+	46033501	46049842	A5SS	0.16	50	50	ENSMUST00000134015.2	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46045332	46049842	+	46033501	46049842	A5SS	0.16	50	50	ENSMUST00000134015.2	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46045599	46049842	+	46033501	46049842	A5SS	0.16	50	50	ENSMUST00000134015.2	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46045798	46049842	+	46033501	46049842	A5SS	0.16	50	50	ENSMUST00000134015.2	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46050729	46051051	+	46050729;46050942	46050841;46051051	ES	0.25	50	50	ENSMUST00000111899.8	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46055725	46056457	+	46055725	46056460	A3SS	0.33	50	50	ENSMUST00000111899.8	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46055725	46060743	+	46055725	46056460	A3SS&ES	0.33	50	50	ENSMUST00000111899.8	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46045298	46049842	+	46045182	46049842	A5SS	0.16	50	50	ENSMUST00000111899.8	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46045332	46049842	+	46045182	46049842	A5SS	0.16	50	50	ENSMUST00000111899.8	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46045599	46049842	+	46045182	46049842	A5SS	0.16	50	50	ENSMUST00000111899.8	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46045798	46049842	+	46045182	46049842	A5SS	0.16	50	50	ENSMUST00000111899.8	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46050933	46051051	+	46050942	46051051	A5SS	0.25	50	50	ENSMUST00000111899.8	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46050729	46051051	+	46050729;46050933	46050841;46051051	ES	0.25	50	50	ENSMUST00000099392.10	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46055725	46056457	+	46055725	46060743	A3SS	0.33	50	50	ENSMUST00000099392.10	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46045298	46049842	+	46045599	46049842	A5SS	0.16	50	50	ENSMUST00000128386.2	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46045332	46049842	+	46045599	46049842	A5SS	0.16	50	50	ENSMUST00000128386.2	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46045798	46049842	+	46045599	46049842	A5SS	0.16	50	50	ENSMUST00000128386.2	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46050729	46051051	+	46050729	46050841	3pMXE	0.5	50	50	ENSMUST00000135327.8	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46045332	46049842	+	46045298	46049842	A5SS	0.16	50	50	ENSMUST00000135327.8	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46045798	46049842	+	46045298	46049842	A5SS	0.16	50	50	ENSMUST00000135327.8	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46050015	46051051	+	46050015;46050729	46050583;46051051	ES	0.25	50	50	ENSMUST00000150158.8	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46045798	46049842	+	46045332	46049842	A5SS	0.16	50	50	ENSMUST00000150158.8	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46050015;46050729	46050580;46051051	+	46050015	46051051	cassetteExon	0.5	100	100	ENSMUST00000147640.2	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46050015;46050933	46050580;46051051	+	46050015	46051051	cassetteExon	0.5	100	100	ENSMUST00000147640.2	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46050015;46050942	46050580;46051051	+	46050015	46051051	cassetteExon	0.5	100	100	ENSMUST00000147640.2	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46050015;46050933	46050583;46051051	+	46050015	46051051	cassetteExon	0.5	100	100	ENSMUST00000147640.2	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46050015;46050942	46050583;46051051	+	46050015	46051051	cassetteExon	0.5	100	100	ENSMUST00000147640.2	ENSMUSG00000055491.15	Pprc1	chr19	protein_coding	peroxisome proliferative activated receptor, gamma, coactivator-related 1
chr19	46064588;46066222	46066115;46067312	+	46064588;46067197	46067142;46067312	MXE	0.5	100	100	ENSMUST00000165017.2	ENSMUSG00000015176.12	Nolc1	chr19	protein_coding	nucleolar and coiled-body phosphoprotein 1
chr19	46067197	46067297	+	46067197	46067312	A3SS	0.33	50	50	ENSMUST00000165017.2	ENSMUSG00000015176.12	Nolc1	chr19	protein_coding	nucleolar and coiled-body phosphoprotein 1
chr19	46067197	46067315	+	46067197	46067312	A3SS	0.33	50	50	ENSMUST00000165017.2	ENSMUSG00000015176.12	Nolc1	chr19	protein_coding	nucleolar and coiled-body phosphoprotein 1
chr19	46067697	46068350	+	46067697	46068347	A3SS	0.5	50	50	ENSMUST00000165017.2	ENSMUSG00000015176.12	Nolc1	chr19	protein_coding	nucleolar and coiled-body phosphoprotein 1
chr19	46064588	46066115	+	46064588	46067142	A3SS	0.5	50	50	ENSMUST00000223741.2	ENSMUSG00000015176.12	Nolc1	chr19	protein_coding	nucleolar and coiled-body phosphoprotein 1
chr19	46067197	46067315	+	46067197	46067297	A3SS	0.33	50	50	ENSMUST00000223741.2	ENSMUSG00000015176.12	Nolc1	chr19	protein_coding	nucleolar and coiled-body phosphoprotein 1
chr19	46120612	46121563	+	46120706	46121563	A5SS	0.5	50	50	ENSMUST00000043739.6	ENSMUSG00000038754.6	Elovl3	chr19	protein_coding	elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3
chr19	46125933	46129381	-	46125933	46136640	A5SS	0.5	50	50	ENSMUST00000026259.16	ENSMUSG00000025229.16	Pitx3	chr19	protein_coding	paired-like homeodomain transcription factor 3
chr19	46141231	46159096	+	46141231;46152064	46151959;46159096	ES	0.5	50	50	ENSMUST00000026254.14	ENSMUSG00000025224.17	Gbf1	chr19	protein_coding	golgi-specific brefeldin A-resistance factor 1
chr19	46258420	46259113	+	46258420;46258790	46258697;46259113	ES	0.5	50	50	ENSMUST00000026254.14	ENSMUSG00000025224.17	Gbf1	chr19	protein_coding	golgi-specific brefeldin A-resistance factor 1
chr19	46244146;46244921	46244847;46247543	+	46244146	46247543	cassetteExon	0.5	100	100	ENSMUST00000026254.14	ENSMUSG00000025224.17	Gbf1	chr19	protein_coding	golgi-specific brefeldin A-resistance factor 1
chr19	46256555	46256859	+	46256555	46256830	A3SS	0.5	50	50	ENSMUST00000026254.14	ENSMUSG00000025224.17	Gbf1	chr19	protein_coding	golgi-specific brefeldin A-resistance factor 1
chr19	46269170	46271474	+	46269182	46271474	A5SS	0.33	50	50	ENSMUST00000026254.14	ENSMUSG00000025224.17	Gbf1	chr19	protein_coding	golgi-specific brefeldin A-resistance factor 1
chr19	46269170	46271759	+	46271624	46271759	A5SS&ES	0.5	50	50	ENSMUST00000026254.14	ENSMUSG00000025224.17	Gbf1	chr19	protein_coding	golgi-specific brefeldin A-resistance factor 1
chr19	46271359	46271474	+	46269182	46271474	A5SS	0.33	50	50	ENSMUST00000026254.14	ENSMUSG00000025224.17	Gbf1	chr19	protein_coding	golgi-specific brefeldin A-resistance factor 1
chr19	46269170	46271759	+	46269170;46271624	46271474;46271759	ES	0.5	50	50	ENSMUST00000176992.8	ENSMUSG00000025224.17	Gbf1	chr19	protein_coding	golgi-specific brefeldin A-resistance factor 1
chr19	46271359	46271474	+	46269170	46271474	A5SS	0.33	50	50	ENSMUST00000176992.8	ENSMUSG00000025224.17	Gbf1	chr19	protein_coding	golgi-specific brefeldin A-resistance factor 1
chr19	46299314	46299721	+	46299314;46299517	46299448;46299721	ES	0.5	50	50	ENSMUST00000237330.2	ENSMUSG00000025225.16	Nfkb2	chr19	protein_coding	nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100
chr19	46293400	46294369	+	46293259	46294369	A5SS	0.5	50	50	ENSMUST00000237330.2	ENSMUSG00000025225.16	Nfkb2	chr19	protein_coding	nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100
chr19	46304515	46306093	-	46304515	46305922	5pMXE	0.33	50	50	ENSMUST00000225748.2	ENSMUSG00000037126.17	Psd	chr19	protein_coding	pleckstrin and Sec7 domain containing
chr19	46304515	46307913	-	46304515	46305922	5pMXE	0.33	50	50	ENSMUST00000225748.2	ENSMUSG00000037126.17	Psd	chr19	protein_coding	pleckstrin and Sec7 domain containing
chr19	46304515	46307913	-	46304515	46306093	5pMXE	0.33	50	50	ENSMUST00000224556.2	ENSMUSG00000037126.17	Psd	chr19	protein_coding	pleckstrin and Sec7 domain containing
chr19	46313452	46315523	-	46313452;46314661	46314606;46315523	ES	0.33	50	50	ENSMUST00000041391.5	ENSMUSG00000037126.17	Psd	chr19	protein_coding	pleckstrin and Sec7 domain containing
chr19	46314661;46315446	46315337;46315523	-	46314661	46315523	cassetteExon	0.5	100	100	ENSMUST00000041391.5	ENSMUSG00000037126.17	Psd	chr19	protein_coding	pleckstrin and Sec7 domain containing
chr19	46309405	46310495	-	46309402	46310495	A3SS	0.5	50	50	ENSMUST00000041391.5	ENSMUSG00000037126.17	Psd	chr19	protein_coding	pleckstrin and Sec7 domain containing
chr19	46314661	46314840	-	46314661	46315523	A5SS	0.25	50	50	ENSMUST00000041391.5	ENSMUSG00000037126.17	Psd	chr19	protein_coding	pleckstrin and Sec7 domain containing
chr19	46314661	46314902	-	46314661	46315523	A5SS	0.25	50	50	ENSMUST00000041391.5	ENSMUSG00000037126.17	Psd	chr19	protein_coding	pleckstrin and Sec7 domain containing
chr19	46315446	46315523	-	46313452	46315523	A3SS	0.33	50	50	ENSMUST00000224447.2	ENSMUSG00000037126.17	Psd	chr19	protein_coding	pleckstrin and Sec7 domain containing
chr19	46314661	46315337	-	46314661	46314840	5pMXE	0.25	50	50	ENSMUST00000225781.2	ENSMUSG00000037126.17	Psd	chr19	protein_coding	pleckstrin and Sec7 domain containing
chr19	46314661	46314902	-	46314661	46314840	A5SS	0.25	50	50	ENSMUST00000225781.2	ENSMUSG00000037126.17	Psd	chr19	protein_coding	pleckstrin and Sec7 domain containing
chr19	46314661	46315337	-	46314661	46314902	5pMXE	0.25	50	50	ENSMUST00000223903.2	ENSMUSG00000037126.17	Psd	chr19	protein_coding	pleckstrin and Sec7 domain containing
chr19	46314621	46315337	-	46314661	46315337	A3SS	0.5	50	50	ENSMUST00000223917.2	ENSMUSG00000037126.17	Psd	chr19	protein_coding	pleckstrin and Sec7 domain containing
chr19	46313452	46315523	-	46313452	46314606	A5SS&ES	0.5	50	50	ENSMUST00000224444.2	ENSMUSG00000037126.17	Psd	chr19	protein_coding	pleckstrin and Sec7 domain containing
chr19	46319811	46319985	-	46319905	46319985	A3SS	0.5	50	50	ENSMUST00000235485.2	ENSMUSG00000036748.17	Cuedc2	chr19	protein_coding	CUE domain containing 2
chr19	46320058	46320196	-	46320112	46320196	A3SS	0.33	50	50	ENSMUST00000235485.2	ENSMUSG00000036748.17	Cuedc2	chr19	protein_coding	CUE domain containing 2
chr19	46320079	46320196	-	46320112	46320196	A3SS	0.33	50	50	ENSMUST00000235485.2	ENSMUSG00000036748.17	Cuedc2	chr19	protein_coding	CUE domain containing 2
chr19	46321140	46327008	-	46321137	46327008	A3SS	0.2	50	50	ENSMUST00000235485.2	ENSMUSG00000036748.17	Cuedc2	chr19	protein_coding	CUE domain containing 2
chr19	46326850	46327008	-	46321137	46327008	A3SS	0.2	50	50	ENSMUST00000235485.2	ENSMUSG00000036748.17	Cuedc2	chr19	protein_coding	CUE domain containing 2
chr19	46326859	46327008	-	46321137	46327008	A3SS	0.2	50	50	ENSMUST00000235485.2	ENSMUSG00000036748.17	Cuedc2	chr19	protein_coding	CUE domain containing 2
chr19	46326869	46327008	-	46321137	46327008	A3SS	0.2	50	50	ENSMUST00000235485.2	ENSMUSG00000036748.17	Cuedc2	chr19	protein_coding	CUE domain containing 2
chr19	46321140	46327008	-	46321140;46326859	46326752;46327008	ES	0.2	50	50	ENSMUST00000167861.8	ENSMUSG00000036748.17	Cuedc2	chr19	protein_coding	CUE domain containing 2
chr19	46326850	46327008	-	46326859	46327008	A3SS	0.2	50	50	ENSMUST00000167861.8	ENSMUSG00000036748.17	Cuedc2	chr19	protein_coding	CUE domain containing 2
chr19	46326869	46327008	-	46326859	46327008	A3SS	0.2	50	50	ENSMUST00000167861.8	ENSMUSG00000036748.17	Cuedc2	chr19	protein_coding	CUE domain containing 2
chr19	46321140	46326749	-	46321140	46326752	A5SS	0.33	50	50	ENSMUST00000167861.8	ENSMUSG00000036748.17	Cuedc2	chr19	protein_coding	CUE domain containing 2
chr19	46321140;46326850	46326749;46327008	-	46321140	46327008	cassetteExon	0.5	100	100	ENSMUST00000051234.9	ENSMUSG00000036748.17	Cuedc2	chr19	protein_coding	CUE domain containing 2
chr19	46321140;46326850	46326752;46327008	-	46321140	46327008	cassetteExon	0.5	100	100	ENSMUST00000051234.9	ENSMUSG00000036748.17	Cuedc2	chr19	protein_coding	CUE domain containing 2
chr19	46321140;46326859	46326749;46327008	-	46321140	46327008	cassetteExon	0.5	100	100	ENSMUST00000051234.9	ENSMUSG00000036748.17	Cuedc2	chr19	protein_coding	CUE domain containing 2
chr19	46321140;46326869	46326749;46327008	-	46321140	46327008	cassetteExon	0.5	100	100	ENSMUST00000051234.9	ENSMUSG00000036748.17	Cuedc2	chr19	protein_coding	CUE domain containing 2
chr19	46321140;46326869	46326752;46327008	-	46321140	46327008	cassetteExon	0.5	100	100	ENSMUST00000051234.9	ENSMUSG00000036748.17	Cuedc2	chr19	protein_coding	CUE domain containing 2
chr19	46320058	46320196	-	46320079	46320196	A3SS	0.33	50	50	ENSMUST00000235977.2	ENSMUSG00000036748.17	Cuedc2	chr19	protein_coding	CUE domain containing 2
chr19	46326850	46327008	-	46326869	46327008	A3SS	0.2	50	50	ENSMUST00000236046.2	ENSMUSG00000036748.17	Cuedc2	chr19	protein_coding	CUE domain containing 2
chr19	46326869	46326959	-	46326869	46327008	A5SS	0.5	50	50	ENSMUST00000236046.2	ENSMUSG00000036748.17	Cuedc2	chr19	protein_coding	CUE domain containing 2
chr19	46321140	46327008	-	46321140	46326752	A5SS	0.33	50	50	ENSMUST00000236066.2	ENSMUSG00000036748.17	Cuedc2	chr19	protein_coding	CUE domain containing 2
chr19	46357772	46360621	+	46357772;46360546	46360375;46360621	ES	0.5	50	50	ENSMUST00000128041.8	ENSMUSG00000025227.15	Mfsd13a	chr19	protein_coding	major facilitator superfamily domain containing 13a
chr19	46345423	46354750	+	46329609	46354750	A5SS	0.5	50	50	ENSMUST00000128041.8	ENSMUSG00000025227.15	Mfsd13a	chr19	protein_coding	major facilitator superfamily domain containing 13a
chr19	46345423	46355649	+	46354992	46355649	A5SS&ES	0.5	50	50	ENSMUST00000128041.8	ENSMUSG00000025227.15	Mfsd13a	chr19	protein_coding	major facilitator superfamily domain containing 13a
chr19	46345423	46355649	+	46345423;46354992	46354750;46355649	ES	0.5	50	50	ENSMUST00000086969.13	ENSMUSG00000025227.15	Mfsd13a	chr19	protein_coding	major facilitator superfamily domain containing 13a
chr19	46367087	46368021	-	46367087;46367913	46367852;46368021	ES	0.5	50	50	ENSMUST00000040270.6	ENSMUSG00000025228.6	Actr1a	chr19	protein_coding	ARP1 actin-related protein 1A, centractin alpha
chr19	46375955;46380955	46380788;46384069	-	46375955	46384069	cassetteExon	0.5	100	100	ENSMUST00000040270.6	ENSMUSG00000025228.6	Actr1a	chr19	protein_coding	ARP1 actin-related protein 1A, centractin alpha
chr19	46367087	46368021	-	46367087	46367852	5pMXE	0.5	50	50	ENSMUST00000236814.2	ENSMUSG00000025228.6	Actr1a	chr19	protein_coding	ARP1 actin-related protein 1A, centractin alpha
chr19	46373527	46375891	-	46370857	46375891	A3SS	0.5	50	50	ENSMUST00000237477.2	ENSMUSG00000025228.6	Actr1a	chr19	protein_coding	ARP1 actin-related protein 1A, centractin alpha
chr19	46370857	46372659	-	46370857	46375891	A5SS	0.5	50	50	ENSMUST00000237477.2	ENSMUSG00000025228.6	Actr1a	chr19	protein_coding	ARP1 actin-related protein 1A, centractin alpha
chr19	46385723	46413438	+	46385723;46389697	46389563;46413438	ES	0.5	50	50	ENSMUST00000039922.13	ENSMUSG00000025231.18	Sufu	chr19	protein_coding	SUFU negative regulator of hedgehog signaling
chr19	46439402	46441598	+	46439402	46441601	A3SS	0.5	50	50	ENSMUST00000039922.13	ENSMUSG00000025231.18	Sufu	chr19	protein_coding	SUFU negative regulator of hedgehog signaling
chr19	46446416	46462011	+	46443285	46462011	A5SS	0.5	50	50	ENSMUST00000039922.13	ENSMUSG00000025231.18	Sufu	chr19	protein_coding	SUFU negative regulator of hedgehog signaling
chr19	46471732	46472039	+	46464085	46472039	A5SS	0.5	50	50	ENSMUST00000039922.13	ENSMUSG00000025231.18	Sufu	chr19	protein_coding	SUFU negative regulator of hedgehog signaling
chr19	46385723	46413438	+	46389697	46413438	5pMXE	0.5	50	50	ENSMUST00000235166.2	ENSMUSG00000025231.18	Sufu	chr19	protein_coding	SUFU negative regulator of hedgehog signaling
chr19	46503176	46503369	+	46503176	46503498	A3SS	0.5	50	50	ENSMUST00000026008.9	ENSMUSG00000025034.10	Trim8	chr19	protein_coding	tripartite motif-containing 8
chr19	46519825;46529949	46529882;46530791	-	46519825	46530791	cassetteExon	0.5	100	100	ENSMUST00000026009.10	ENSMUSG00000025035.10	Arl3	chr19	protein_coding	ADP-ribosylation factor-like 3
chr19	46519825;46529968	46529882;46530791	-	46519825	46530791	cassetteExon	0.5	100	100	ENSMUST00000026009.10	ENSMUSG00000025035.10	Arl3	chr19	protein_coding	ADP-ribosylation factor-like 3
chr19	46557411	46561479	-	46546820	46561479	A3SS	0.5	50	50	ENSMUST00000026009.10	ENSMUSG00000025035.10	Arl3	chr19	protein_coding	ADP-ribosylation factor-like 3
chr19	46530976	46531133	-	46530976	46531921	A5SS	0.5	50	50	ENSMUST00000026009.10	ENSMUSG00000025035.10	Arl3	chr19	protein_coding	ADP-ribosylation factor-like 3
chr19	46529968	46530791	-	46529949	46530791	A3SS	0.33	50	50	ENSMUST00000236255.2	ENSMUSG00000025035.10	Arl3	chr19	protein_coding	ADP-ribosylation factor-like 3
chr19	46576449;46576748	46576663;46578580	+	46576449	46578580	cassetteExon	0.5	100	100	ENSMUST00000236845.2	ENSMUSG00000025036.8	Sfxn2	chr19	protein_coding	sideroflexin 2
chr19	46583307	46585107	+	46583307	46585945	A3SS	0.5	50	50	ENSMUST00000236845.2	ENSMUSG00000025036.8	Sfxn2	chr19	protein_coding	sideroflexin 2
chr19	46578185	46578580	+	46576449	46578580	A5SS	0.33	50	50	ENSMUST00000236845.2	ENSMUSG00000025036.8	Sfxn2	chr19	protein_coding	sideroflexin 2
chr19	46576748;46578185	46577993;46578580	+	46576748	46578580	cassetteExon	0.5	100	100	ENSMUST00000026011.8	ENSMUSG00000025036.8	Sfxn2	chr19	protein_coding	sideroflexin 2
chr19	46587732;46595198	46595151;46632792	+	46587732	46632792	cassetteExon	0.5	100	100	ENSMUST00000138302.9	ENSMUSG00000047731.18	Wbp1l	chr19	protein_coding	WW domain binding protein 1 like
chr19	46612018	46632792	+	46587732	46632792	A5SS	0.25	50	50	ENSMUST00000138302.9	ENSMUSG00000047731.18	Wbp1l	chr19	protein_coding	WW domain binding protein 1 like
chr19	46612972	46632792	+	46587732	46632792	A5SS	0.25	50	50	ENSMUST00000138302.9	ENSMUSG00000047731.18	Wbp1l	chr19	protein_coding	WW domain binding protein 1 like
chr19	46633006	46640913	+	46632894	46640913	A5SS	0.5	50	50	ENSMUST00000138302.9	ENSMUSG00000047731.18	Wbp1l	chr19	protein_coding	WW domain binding protein 1 like
chr19	46612018	46632792	+	46595198	46632792	A5SS	0.25	50	50	ENSMUST00000099376.11	ENSMUSG00000047731.18	Wbp1l	chr19	protein_coding	WW domain binding protein 1 like
chr19	46612972	46632792	+	46595198	46632792	A5SS	0.25	50	50	ENSMUST00000099376.11	ENSMUSG00000047731.18	Wbp1l	chr19	protein_coding	WW domain binding protein 1 like
chr19	46612018	46632792	+	46612018;46612972	46612749;46632792	ES	0.5	50	50	ENSMUST00000156649.2	ENSMUSG00000047731.18	Wbp1l	chr19	protein_coding	WW domain binding protein 1 like
chr19	46696636	46697986	+	46696636;46697557	46697407;46697986	ES	0.5	50	50	ENSMUST00000003655.9	ENSMUSG00000003559.9	As3mt	chr19	protein_coding	arsenite methyltransferase
chr19	46697557	46700660	+	46697557;46698122	46697986;46700660	ES	0.33	50	50	ENSMUST00000003655.9	ENSMUSG00000003559.9	As3mt	chr19	protein_coding	arsenite methyltransferase
chr19	46698100	46700660	+	46698122	46700660	A5SS	0.33	50	50	ENSMUST00000003655.9	ENSMUSG00000003559.9	As3mt	chr19	protein_coding	arsenite methyltransferase
chr19	46697557	46700660	+	46697557;46698100	46697986;46700660	ES	0.33	50	50	ENSMUST00000236063.2	ENSMUSG00000003559.9	As3mt	chr19	protein_coding	arsenite methyltransferase
chr19	46696636	46697986	+	46696636	46697407	A3SS	0.5	50	50	ENSMUST00000236473.2	ENSMUSG00000003559.9	As3mt	chr19	protein_coding	arsenite methyltransferase
chr19	46696636;46697557	46697407;46700660	+	46696636;46698122	46697986;46700660	MXE	0.5	100	100	ENSMUST00000235842.2	ENSMUSG00000003559.9	As3mt	chr19	protein_coding	arsenite methyltransferase
chr19	46696636;46698100	46697986;46700660	+	46696636;46697557	46697407;46700660	MXE	0.5	100	100	ENSMUST00000236465.2	ENSMUSG00000003559.9	As3mt	chr19	protein_coding	arsenite methyltransferase
chr19	46857070	46865647	+	46857070;46860160	46860095;46865647	ES	0.5	50	50	ENSMUST00000099373.12	ENSMUSG00000064105.14	Cnnm2	chr19	protein_coding	cyclin M2
chr19	46854302	46856977	+	46847551	46856977	A5SS	0.5	50	50	ENSMUST00000099373.12	ENSMUSG00000064105.14	Cnnm2	chr19	protein_coding	cyclin M2
chr19	46939404	47003137	-	46939404	46957858	5pMXE	0.16	50	50	ENSMUST00000235234.2	ENSMUSG00000025041.18	Nt5c2	chr19	protein_coding	5'-nucleotidase, cytosolic II
chr19	46886108;46886960	46886767;46887061	-	46886108	46887061	cassetteExon	0.5	100	100	ENSMUST00000235234.2	ENSMUSG00000025041.18	Nt5c2	chr19	protein_coding	5'-nucleotidase, cytosolic II
chr19	46893531;46897987	46897929;46912701	-	46893531	46912701	cassetteExon	0.5	100	100	ENSMUST00000235234.2	ENSMUSG00000025041.18	Nt5c2	chr19	protein_coding	5'-nucleotidase, cytosolic II
chr19	46912774;46925812	46925731;46939285	-	46912774	46939285	cassetteExon	0.5	100	100	ENSMUST00000235234.2	ENSMUSG00000025041.18	Nt5c2	chr19	protein_coding	5'-nucleotidase, cytosolic II
chr19	46912774	46917475	-	46912774	46939285	A5SS	0.25	50	50	ENSMUST00000235234.2	ENSMUSG00000025041.18	Nt5c2	chr19	protein_coding	5'-nucleotidase, cytosolic II
chr19	46912774	46950711	-	46912774	46939285	A5SS&ES	0.25	50	50	ENSMUST00000235234.2	ENSMUSG00000025041.18	Nt5c2	chr19	protein_coding	5'-nucleotidase, cytosolic II
chr19	46939404	46941470	-	46939404	46957858	A5SS	0.16	50	50	ENSMUST00000235234.2	ENSMUSG00000025041.18	Nt5c2	chr19	protein_coding	5'-nucleotidase, cytosolic II
chr19	46939404	46950027	-	46939404	46957858	A5SS	0.16	50	50	ENSMUST00000235234.2	ENSMUSG00000025041.18	Nt5c2	chr19	protein_coding	5'-nucleotidase, cytosolic II
chr19	46939404	46950711	-	46939404	46957858	A5SS	0.16	50	50	ENSMUST00000235234.2	ENSMUSG00000025041.18	Nt5c2	chr19	protein_coding	5'-nucleotidase, cytosolic II
chr19	46939404	46950843	-	46939404	46957858	A5SS	0.16	50	50	ENSMUST00000235234.2	ENSMUSG00000025041.18	Nt5c2	chr19	protein_coding	5'-nucleotidase, cytosolic II
chr19	46912774	46950711	-	46912774;46939404	46939285;46950711	ES	0.33	50	50	ENSMUST00000168536.9	ENSMUSG00000025041.18	Nt5c2	chr19	protein_coding	5'-nucleotidase, cytosolic II
chr19	46939404	46950843	-	46939404	46950711	5pMXE	0.16	50	50	ENSMUST00000168536.9	ENSMUSG00000025041.18	Nt5c2	chr19	protein_coding	5'-nucleotidase, cytosolic II
chr19	46939404	47003137	-	46939404	46950711	5pMXE	0.16	50	50	ENSMUST00000168536.9	ENSMUSG00000025041.18	Nt5c2	chr19	protein_coding	5'-nucleotidase, cytosolic II
chr19	46939404;46941597	46941470;46950711	-	46939404	46950711	cassetteExon	0.5	100	100	ENSMUST00000168536.9	ENSMUSG00000025041.18	Nt5c2	chr19	protein_coding	5'-nucleotidase, cytosolic II
chr19	46939404	46950027	-	46939404	46950711	A5SS	0.16	50	50	ENSMUST00000168536.9	ENSMUSG00000025041.18	Nt5c2	chr19	protein_coding	5'-nucleotidase, cytosolic II
chr19	46912774	46925731	-	46912774	46917475	5pMXE	0.25	50	50	ENSMUST00000236727.2	ENSMUSG00000025041.18	Nt5c2	chr19	protein_coding	5'-nucleotidase, cytosolic II
chr19	46912774	46950711	-	46912774	46917475	5pMXE	0.25	50	50	ENSMUST00000236727.2	ENSMUSG00000025041.18	Nt5c2	chr19	protein_coding	5'-nucleotidase, cytosolic II
chr19	46939404	46950843	-	46939404	46950027	5pMXE	0.16	50	50	ENSMUST00000236501.2	ENSMUSG00000025041.18	Nt5c2	chr19	protein_coding	5'-nucleotidase, cytosolic II
chr19	46939404	47003137	-	46939404	46950027	5pMXE	0.16	50	50	ENSMUST00000236501.2	ENSMUSG00000025041.18	Nt5c2	chr19	protein_coding	5'-nucleotidase, cytosolic II
chr19	46939404	46941470	-	46939404	46950027	A5SS	0.16	50	50	ENSMUST00000236501.2	ENSMUSG00000025041.18	Nt5c2	chr19	protein_coding	5'-nucleotidase, cytosolic II
chr19	46939404	46941470	-	46939404	47003137	A5SS	0.16	50	50	ENSMUST00000172239.3	ENSMUSG00000025041.18	Nt5c2	chr19	protein_coding	5'-nucleotidase, cytosolic II
chr19	46939404	46950843	-	46939404	47003137	A5SS	0.16	50	50	ENSMUST00000172239.3	ENSMUSG00000025041.18	Nt5c2	chr19	protein_coding	5'-nucleotidase, cytosolic II
chr19	46893531	46912701	-	46893531	46897929	5pMXE	0.5	50	50	ENSMUST00000174731.3	ENSMUSG00000025041.18	Nt5c2	chr19	protein_coding	5'-nucleotidase, cytosolic II
chr19	46941597	46950711	-	46912774	46950711	A3SS	0.33	50	50	ENSMUST00000236783.2	ENSMUSG00000025041.18	Nt5c2	chr19	protein_coding	5'-nucleotidase, cytosolic II
chr19	46912774	46925731	-	46912774	46950711	A5SS	0.25	50	50	ENSMUST00000236783.2	ENSMUSG00000025041.18	Nt5c2	chr19	protein_coding	5'-nucleotidase, cytosolic II
chr19	46939404	46941470	-	46939404	46950843	A5SS	0.16	50	50	ENSMUST00000237639.2	ENSMUSG00000025041.18	Nt5c2	chr19	protein_coding	5'-nucleotidase, cytosolic II
chr19	46912774	46950711	-	46939404	46950711	3pMXE	0.33	50	50	ENSMUST00000237658.2	ENSMUSG00000025041.18	Nt5c2	chr19	protein_coding	5'-nucleotidase, cytosolic II
chr19	47031232	47036386	-	47031232;47034357	47034249;47036386	ES	0.5	50	50	ENSMUST00000026032.7	ENSMUSG00000025050.9	Pcgf6	chr19	protein_coding	polycomb group ring finger 6
chr19	47028581;47030578	47030561;47031205	-	47028581	47031205	cassetteExon	0.5	100	100	ENSMUST00000026032.7	ENSMUSG00000025050.9	Pcgf6	chr19	protein_coding	polycomb group ring finger 6
chr19	47072008;47073297	47073208;47074394	-	47072008	47074394	cassetteExon	0.5	100	100	ENSMUST00000096014.5	ENSMUSG00000071528.5	Atp5md	chr19	protein_coding	ATP synthase membrane subunit DAPIT
chr19	47229110	47229741	+	47229110	47241558	A3SS	0.5	50	50	ENSMUST00000111808.11	ENSMUSG00000006435.17	Neurl1a	chr19	protein_coding	neuralized E3 ubiquitin protein ligase 1A
chr19	47217535	47228241	+	47167990	47228241	A5SS	0.5	50	50	ENSMUST00000111808.11	ENSMUSG00000006435.17	Neurl1a	chr19	protein_coding	neuralized E3 ubiquitin protein ligase 1A
chr19	47266869	47275044	-	47266869;47271543	47271460;47275044	ES	0.5	50	50	ENSMUST00000081619.10	ENSMUSG00000053617.13	Sh3pxd2a	chr19	protein_coding	SH3 and PX domains 2A
chr19	47352443	47353062	-	47331907	47353062	A3SS	0.5	50	50	ENSMUST00000081619.10	ENSMUSG00000053617.13	Sh3pxd2a	chr19	protein_coding	SH3 and PX domains 2A
chr19	47386330	47398641	-	47386330	47412929	A5SS	0.5	50	50	ENSMUST00000081619.10	ENSMUSG00000053617.13	Sh3pxd2a	chr19	protein_coding	SH3 and PX domains 2A
chr19	47496037	47496245	-	47490156	47496245	A3SS	0.5	50	50	ENSMUST00000049369.16	ENSMUSG00000042694.18	Stn1	chr19	protein_coding	STN1, CST complex subunit
chr19	47510636	47513126	-	47505633	47513126	A3SS	0.33	50	50	ENSMUST00000049369.16	ENSMUSG00000042694.18	Stn1	chr19	protein_coding	STN1, CST complex subunit
chr19	47512610	47513126	-	47505633	47513126	A3SS	0.33	50	50	ENSMUST00000049369.16	ENSMUSG00000042694.18	Stn1	chr19	protein_coding	STN1, CST complex subunit
chr19	47521153	47524635	-	47517171	47524635	A3SS	0.5	50	50	ENSMUST00000049369.16	ENSMUSG00000042694.18	Stn1	chr19	protein_coding	STN1, CST complex subunit
chr19	47496317	47497164	-	47496317	47498774	A5SS	0.5	50	50	ENSMUST00000049369.16	ENSMUSG00000042694.18	Stn1	chr19	protein_coding	STN1, CST complex subunit
chr19	47524810	47525414	-	47524810	47525253	A5SS	0.5	50	50	ENSMUST00000049369.16	ENSMUSG00000042694.18	Stn1	chr19	protein_coding	STN1, CST complex subunit
chr19	47512610	47513126	-	47510636	47513126	A3SS	0.33	50	50	ENSMUST00000182431.8	ENSMUSG00000042694.18	Stn1	chr19	protein_coding	STN1, CST complex subunit
chr19	47613923;47616179	47616087;47623908	+	47613923	47623908	cassetteExon	0.5	100	100	ENSMUST00000026043.12	ENSMUSG00000025060.16	Slk	chr19	protein_coding	STE20-like kinase
chr19	47618978	47623908	+	47613923	47623908	A5SS	0.33	50	50	ENSMUST00000026043.12	ENSMUSG00000025060.16	Slk	chr19	protein_coding	STE20-like kinase
chr19	47616179;47618978	47618907;47623908	+	47616179	47623908	cassetteExon	0.5	100	100	ENSMUST00000051691.8	ENSMUSG00000025060.16	Slk	chr19	protein_coding	STE20-like kinase
chr19	47637911	47638696	-	47637911;47638597	47638487;47638696	ES	0.5	50	50	ENSMUST00000026045.14	ENSMUSG00000025064.16	Col17a1	chr19	protein_coding	collagen, type XVII, alpha 1
chr19	47720900	47721069	+	47720260	47721069	A5SS	0.5	50	50	ENSMUST00000099353.6	ENSMUSG00000025066.11	Sfr1	chr19	protein_coding	SWI5 dependent recombination repair 1
chr19	47824256	47907563	-	47824256	47825654	5pMXE	0.5	50	50	ENSMUST00000160247.3	ENSMUSG00000044948.18	Cfap43	chr19	protein_coding	cilia and flagella associated protein 43
chr19	47733779	47733883	-	47728273	47733883	A3SS	0.5	50	50	ENSMUST00000160247.3	ENSMUSG00000044948.18	Cfap43	chr19	protein_coding	cilia and flagella associated protein 43
chr19	47750264	47750381	-	47750156	47750381	A3SS	0.5	50	50	ENSMUST00000160247.3	ENSMUSG00000044948.18	Cfap43	chr19	protein_coding	cilia and flagella associated protein 43
chr19	47783510	47784042	-	47779961	47784042	A3SS	0.5	50	50	ENSMUST00000160247.3	ENSMUSG00000044948.18	Cfap43	chr19	protein_coding	cilia and flagella associated protein 43
chr19	47728273	47728363	-	47728273	47733883	A5SS	0.5	50	50	ENSMUST00000160247.3	ENSMUSG00000044948.18	Cfap43	chr19	protein_coding	cilia and flagella associated protein 43
chr19	47750473	47751953	-	47750473	47752080	A5SS	0.5	50	50	ENSMUST00000160247.3	ENSMUSG00000044948.18	Cfap43	chr19	protein_coding	cilia and flagella associated protein 43
chr19	47886624	47907563	-	47824256	47907563	A3SS	0.33	50	50	ENSMUST00000026048.10	ENSMUSG00000044948.18	Cfap43	chr19	protein_coding	cilia and flagella associated protein 43
chr19	47903039	47907563	-	47824256	47907563	A3SS	0.33	50	50	ENSMUST00000026048.10	ENSMUSG00000044948.18	Cfap43	chr19	protein_coding	cilia and flagella associated protein 43
chr19	47844226	47846298	+	47843762	47846298	A5SS	0.5	50	50	ENSMUST00000026050.8	ENSMUSG00000025068.9	Gsto1	chr19	protein_coding	glutathione S-transferase omega 1
chr19	47847994	47851818	+	47847969	47851818	A5SS	0.5	50	50	ENSMUST00000026050.8	ENSMUSG00000025068.9	Gsto1	chr19	protein_coding	glutathione S-transferase omega 1
chr19	47860563	47873095	+	47860563;47863491	47863269;47873095	ES	0.33	50	50	ENSMUST00000235896.2	ENSMUSG00000025069.16	Gsto2	chr19	protein_coding	glutathione S-transferase omega 2
chr19	47863491;47864936	47864835;47873095	+	47863491	47873095	cassetteExon	0.5	100	100	ENSMUST00000235896.2	ENSMUSG00000025069.16	Gsto2	chr19	protein_coding	glutathione S-transferase omega 2
chr19	47854368	47858125	+	47854072	47858125	A5SS	0.33	50	50	ENSMUST00000235896.2	ENSMUSG00000025069.16	Gsto2	chr19	protein_coding	glutathione S-transferase omega 2
chr19	47856441	47858125	+	47854072	47858125	A5SS	0.33	50	50	ENSMUST00000235896.2	ENSMUSG00000025069.16	Gsto2	chr19	protein_coding	glutathione S-transferase omega 2
chr19	47858873	47860093	+	47858762	47860093	A5SS	0.5	50	50	ENSMUST00000235896.2	ENSMUSG00000025069.16	Gsto2	chr19	protein_coding	glutathione S-transferase omega 2
chr19	47856441	47858125	+	47854368	47858125	A5SS	0.33	50	50	ENSMUST00000056159.11	ENSMUSG00000025069.16	Gsto2	chr19	protein_coding	glutathione S-transferase omega 2
chr19	47864936	47873095	+	47860563	47873095	A5SS	0.33	50	50	ENSMUST00000235857.2	ENSMUSG00000025069.16	Gsto2	chr19	protein_coding	glutathione S-transferase omega 2
chr19	47903039	47907563	-	47886624	47907563	A3SS	0.33	50	50	ENSMUST00000095998.7	ENSMUSG00000117975.2	Itprip	chr19	protein_coding	inositol 1,4,5-triphosphate receptor interacting protein
chr19	48419077	48475829	+	48387202	48475829	A5SS	0.5	50	50	ENSMUST00000078880.6	ENSMUSG00000063434.7	Sorcs3	chr19	protein_coding	sortilin-related VPS10 domain containing receptor 3
chr19	48711436	48736679	+	48711436	48748285	A3SS	0.5	50	50	ENSMUST00000235967.2	ENSMUSG00000063434.7	Sorcs3	chr19	protein_coding	sortilin-related VPS10 domain containing receptor 3
chr19	48737836	48748285	+	48711436	48748285	A5SS	0.5	50	50	ENSMUST00000235967.2	ENSMUSG00000063434.7	Sorcs3	chr19	protein_coding	sortilin-related VPS10 domain containing receptor 3
chr19	50139789	50141492	-	50132585	50141492	A3SS	0.33	50	50	ENSMUST00000209413.2	ENSMUSG00000043531.17	Sorcs1	chr19	protein_coding	sortilin-related VPS10 domain containing receptor 1
chr19	50141358	50141492	-	50132585	50141492	A3SS	0.33	50	50	ENSMUST00000209413.2	ENSMUSG00000043531.17	Sorcs1	chr19	protein_coding	sortilin-related VPS10 domain containing receptor 1
chr19	50230528	50240972	-	50230532	50240972	A3SS	0.5	50	50	ENSMUST00000209413.2	ENSMUSG00000043531.17	Sorcs1	chr19	protein_coding	sortilin-related VPS10 domain containing receptor 1
chr19	50139789;50141358	50141198;50141492	-	50139789	50141492	cassetteExon	0.5	100	100	ENSMUST00000211687.2	ENSMUSG00000043531.17	Sorcs1	chr19	protein_coding	sortilin-related VPS10 domain containing receptor 1
chr19	50139789	50141492	-	50141358	50141492	3pMXE	0.33	50	50	ENSMUST00000211008.2	ENSMUSG00000043531.17	Sorcs1	chr19	protein_coding	sortilin-related VPS10 domain containing receptor 1
chr19	50135587	50156900	+	50135587	50164421	A3SS	0.5	50	50	ENSMUST00000235909.2	ENSMUSG00000110007.3	Gm45352	chr19	lncRNA	predicted gene 45352
chr19	52911931	52929190	+	52911931	52914004	3pMXE	0.5	50	50	ENSMUST00000236393.2	ENSMUSG00000117896.2	AA387883	chr19	lncRNA	expressed sequence AA387883
chr19	53013814;53020528	53020440;53026945	-	53013814	53026945	cassetteExon	0.5	100	100	ENSMUST00000236456.2	ENSMUSG00000025027.19	Xpnpep1	chr19	protein_coding	X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
chr19	52932087	52983852	-	52920693	52983852	A3SS	0.25	50	50	ENSMUST00000236456.2	ENSMUSG00000025027.19	Xpnpep1	chr19	protein_coding	X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
chr19	52937114	52983852	-	52920693	52983852	A3SS	0.25	50	50	ENSMUST00000236456.2	ENSMUSG00000025027.19	Xpnpep1	chr19	protein_coding	X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
chr19	52980150	52983852	-	52920693	52983852	A3SS	0.25	50	50	ENSMUST00000236456.2	ENSMUSG00000025027.19	Xpnpep1	chr19	protein_coding	X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
chr19	53005944	53013690	-	53003105	53013690	A3SS	0.5	50	50	ENSMUST00000236456.2	ENSMUSG00000025027.19	Xpnpep1	chr19	protein_coding	X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
chr19	53021252	53026945	-	53013814	53026945	A3SS	0.25	50	50	ENSMUST00000236456.2	ENSMUSG00000025027.19	Xpnpep1	chr19	protein_coding	X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
chr19	53021256	53026945	-	53013814	53026945	A3SS	0.25	50	50	ENSMUST00000236456.2	ENSMUSG00000025027.19	Xpnpep1	chr19	protein_coding	X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
chr19	53001934	53008417	-	53001934	53003042	A5SS&ES	0.5	50	50	ENSMUST00000236456.2	ENSMUSG00000025027.19	Xpnpep1	chr19	protein_coding	X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
chr19	53003105	53003647	-	53003105	53013690	A5SS	0.33	50	50	ENSMUST00000236456.2	ENSMUSG00000025027.19	Xpnpep1	chr19	protein_coding	X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
chr19	53003105	53008417	-	53003105	53013690	A5SS	0.33	50	50	ENSMUST00000236456.2	ENSMUSG00000025027.19	Xpnpep1	chr19	protein_coding	X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
chr19	53013814	53026945	-	53013814	53020440	5pMXE	0.5	50	50	ENSMUST00000236008.2	ENSMUSG00000025027.19	Xpnpep1	chr19	protein_coding	X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
chr19	53020528;53021252	53021056;53026945	-	53020528	53026945	cassetteExon	0.5	100	100	ENSMUST00000183274.8	ENSMUSG00000025027.19	Xpnpep1	chr19	protein_coding	X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
chr19	53020528;53021256	53021056;53026945	-	53020528	53026945	cassetteExon	0.5	100	100	ENSMUST00000183274.8	ENSMUSG00000025027.19	Xpnpep1	chr19	protein_coding	X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
chr19	52937114	52983852	-	52932087	52983852	A3SS	0.25	50	50	ENSMUST00000183274.8	ENSMUSG00000025027.19	Xpnpep1	chr19	protein_coding	X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
chr19	52980150	52983852	-	52932087	52983852	A3SS	0.25	50	50	ENSMUST00000183274.8	ENSMUSG00000025027.19	Xpnpep1	chr19	protein_coding	X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
chr19	53020528	53023289	-	53020528	53026945	A5SS	0.33	50	50	ENSMUST00000183274.8	ENSMUSG00000025027.19	Xpnpep1	chr19	protein_coding	X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
chr19	52980150	52983852	-	52937114	52983852	A3SS	0.5	50	50	ENSMUST00000182500.8	ENSMUSG00000025027.19	Xpnpep1	chr19	protein_coding	X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
chr19	53020528	53021056	-	53020528	53023289	A5SS	0.33	50	50	ENSMUST00000236058.2	ENSMUSG00000025027.19	Xpnpep1	chr19	protein_coding	X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
chr19	53001934	53008417	-	53001934;53003105	53003042;53008417	ES	0.5	50	50	ENSMUST00000182877.8	ENSMUSG00000025027.19	Xpnpep1	chr19	protein_coding	X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
chr19	53003105	53003647	-	53003105	53008417	A5SS	0.33	50	50	ENSMUST00000182877.8	ENSMUSG00000025027.19	Xpnpep1	chr19	protein_coding	X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
chr19	53021256	53026945	-	53021252	53026945	A3SS	0.25	50	50	ENSMUST00000182097.2	ENSMUSG00000025027.19	Xpnpep1	chr19	protein_coding	X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
chr19	53020528	53026945	-	53021256	53026945	3pMXE	0.25	50	50	ENSMUST00000182939.2	ENSMUSG00000025027.19	Xpnpep1	chr19	protein_coding	X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
chr19	53064876	53069896	+	53022355	53069896	A5SS	0.33	50	50	ENSMUST00000235589.2	ENSMUSG00000099988.8	1700054A03Rik	chr19	lncRNA	RIKEN cDNA 1700054A03 gene
chr19	53064876	53072430	+	53070574	53072430	A5SS&ES	0.25	50	50	ENSMUST00000235589.2	ENSMUSG00000099988.8	1700054A03Rik	chr19	lncRNA	RIKEN cDNA 1700054A03 gene
chr19	53067815	53072430	+	53070574	53072430	A5SS&ES	0.25	50	50	ENSMUST00000235589.2	ENSMUSG00000099988.8	1700054A03Rik	chr19	lncRNA	RIKEN cDNA 1700054A03 gene
chr19	53069173	53069896	+	53022355	53069896	A5SS	0.33	50	50	ENSMUST00000235589.2	ENSMUSG00000099988.8	1700054A03Rik	chr19	lncRNA	RIKEN cDNA 1700054A03 gene
chr19	53071512	53072430	+	53070574	53072430	A5SS	0.25	50	50	ENSMUST00000235589.2	ENSMUSG00000099988.8	1700054A03Rik	chr19	lncRNA	RIKEN cDNA 1700054A03 gene
chr19	53064876;53067815	53067624;53072430	+	53064876	53072430	cassetteExon	0.5	100	100	ENSMUST00000189904.7	ENSMUSG00000099988.8	1700054A03Rik	chr19	lncRNA	RIKEN cDNA 1700054A03 gene
chr19	53064876	53066966	+	53064876	53072430	A3SS	0.25	50	50	ENSMUST00000189904.7	ENSMUSG00000099988.8	1700054A03Rik	chr19	lncRNA	RIKEN cDNA 1700054A03 gene
chr19	53064876	53069896	+	53064876	53072430	A3SS	0.25	50	50	ENSMUST00000189904.7	ENSMUSG00000099988.8	1700054A03Rik	chr19	lncRNA	RIKEN cDNA 1700054A03 gene
chr19	53071512	53072430	+	53064876	53072430	A5SS	0.25	50	50	ENSMUST00000189904.7	ENSMUSG00000099988.8	1700054A03Rik	chr19	lncRNA	RIKEN cDNA 1700054A03 gene
chr19	53064876	53072430	+	53064876;53071512	53069896;53072430	ES	0.25	50	50	ENSMUST00000235604.2	ENSMUSG00000099988.8	1700054A03Rik	chr19	lncRNA	RIKEN cDNA 1700054A03 gene
chr19	53064876;53067815	53067624;53072430	+	53064876;53071512	53069896;53072430	MXE	0.5	100	100	ENSMUST00000235604.2	ENSMUSG00000099988.8	1700054A03Rik	chr19	lncRNA	RIKEN cDNA 1700054A03 gene
chr19	53064876	53066966	+	53064876	53069896	A3SS	0.25	50	50	ENSMUST00000235604.2	ENSMUSG00000099988.8	1700054A03Rik	chr19	lncRNA	RIKEN cDNA 1700054A03 gene
chr19	53069173	53069896	+	53064876	53069896	A5SS	0.33	50	50	ENSMUST00000235604.2	ENSMUSG00000099988.8	1700054A03Rik	chr19	lncRNA	RIKEN cDNA 1700054A03 gene
chr19	53064876	53072430	+	53064876;53067815	53066966;53072430	ES	0.25	50	50	ENSMUST00000237922.2	ENSMUSG00000099988.8	1700054A03Rik	chr19	lncRNA	RIKEN cDNA 1700054A03 gene
chr19	53064876	53067624	+	53064876	53066966	A3SS	0.25	50	50	ENSMUST00000237922.2	ENSMUSG00000099988.8	1700054A03Rik	chr19	lncRNA	RIKEN cDNA 1700054A03 gene
chr19	53067815	53069062	+	53067815	53072430	A3SS	0.5	50	50	ENSMUST00000237922.2	ENSMUSG00000099988.8	1700054A03Rik	chr19	lncRNA	RIKEN cDNA 1700054A03 gene
chr19	53071512	53072430	+	53067815	53072430	A5SS	0.25	50	50	ENSMUST00000237922.2	ENSMUSG00000099988.8	1700054A03Rik	chr19	lncRNA	RIKEN cDNA 1700054A03 gene
chr19	53064876	53069896	+	53064876	53067624	A3SS&ES	0.25	50	50	ENSMUST00000187368.2	ENSMUSG00000099988.8	1700054A03Rik	chr19	lncRNA	RIKEN cDNA 1700054A03 gene
chr19	53129145;53191906	53191845;53205232	+	53129145	53205232	cassetteExon	0.5	100	100	ENSMUST00000111741.10	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53220635;53220864	53220787;53221457	+	53220635	53221457	cassetteExon	0.5	100	100	ENSMUST00000111741.10	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53231058;53232836	53232741;53233429	+	53231058	53233429	cassetteExon	0.5	100	100	ENSMUST00000111741.10	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53130095	53205232	+	53129145	53205232	A5SS	0.12	50	50	ENSMUST00000111741.10	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53131520	53205232	+	53129145	53205232	A5SS	0.12	50	50	ENSMUST00000111741.10	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53135186	53205232	+	53129145	53205232	A5SS	0.12	50	50	ENSMUST00000111741.10	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53148063	53205232	+	53129145	53205232	A5SS	0.12	50	50	ENSMUST00000111741.10	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53186541	53205232	+	53129145	53205232	A5SS	0.12	50	50	ENSMUST00000111741.10	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53186662	53205232	+	53129145	53205232	A5SS	0.12	50	50	ENSMUST00000111741.10	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53130095	53205232	+	53191906	53205232	A5SS&ES	0.12	50	50	ENSMUST00000238130.2	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53131520	53191845	+	53129145	53191845	A5SS	0.2	50	50	ENSMUST00000238130.2	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53131520	53205232	+	53191906	53205232	A5SS&ES	0.12	50	50	ENSMUST00000238130.2	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53132449	53191845	+	53129145	53191845	A5SS	0.2	50	50	ENSMUST00000238130.2	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53135186	53205232	+	53191906	53205232	A5SS&ES	0.12	50	50	ENSMUST00000238130.2	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53148063	53205232	+	53191906	53205232	A5SS&ES	0.12	50	50	ENSMUST00000238130.2	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53170165	53191845	+	53129145	53191845	A5SS	0.2	50	50	ENSMUST00000238130.2	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53183458	53191845	+	53129145	53191845	A5SS	0.2	50	50	ENSMUST00000238130.2	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53186541	53205232	+	53191906	53205232	A5SS&ES	0.12	50	50	ENSMUST00000238130.2	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53186662	53205232	+	53191906	53205232	A5SS&ES	0.12	50	50	ENSMUST00000238130.2	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53130095	53205232	+	53148063	53205232	A5SS&ES	0.14	50	50	ENSMUST00000235133.2	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53131520	53205232	+	53148063	53205232	A5SS&ES	0.14	50	50	ENSMUST00000235133.2	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53135186	53205232	+	53148063	53205232	A5SS&ES	0.14	50	50	ENSMUST00000235133.2	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53186541	53205232	+	53148063	53205232	A5SS	0.14	50	50	ENSMUST00000235133.2	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53186662	53205232	+	53148063	53205232	A5SS	0.14	50	50	ENSMUST00000235133.2	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53131520	53205232	+	53130095	53205232	A5SS	0.12	50	50	ENSMUST00000237224.2	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53135186	53205232	+	53130095	53205232	A5SS	0.12	50	50	ENSMUST00000237224.2	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53186541	53205232	+	53130095	53205232	A5SS	0.12	50	50	ENSMUST00000237224.2	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53186662	53205232	+	53130095	53205232	A5SS	0.12	50	50	ENSMUST00000237224.2	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53131520;53135186	53135147;53205232	+	53131520	53205232	cassetteExon	0.5	100	100	ENSMUST00000050096.15	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53131520;53191906	53191845;53205232	+	53131520	53205232	cassetteExon	0.5	100	100	ENSMUST00000050096.15	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53186541	53205232	+	53131520	53205232	A5SS	0.12	50	50	ENSMUST00000050096.15	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53186662	53205232	+	53131520	53205232	A5SS	0.12	50	50	ENSMUST00000050096.15	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53131520;53191906	53191845;53205232	+	53131520;53135186	53135147;53205232	MXE	0.5	100	100	ENSMUST00000237832.2	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53186541	53205232	+	53135186	53205232	A5SS	0.16	50	50	ENSMUST00000237832.2	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53186662	53205232	+	53135186	53205232	A5SS	0.16	50	50	ENSMUST00000237832.2	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53132449	53191845	+	53131520	53191845	A5SS	0.2	50	50	ENSMUST00000237593.2	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53170165	53191845	+	53131520	53191845	A5SS	0.2	50	50	ENSMUST00000237593.2	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53183458	53191845	+	53131520	53191845	A5SS	0.2	50	50	ENSMUST00000237593.2	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53170165	53191845	+	53132449	53191845	A5SS	0.2	50	50	ENSMUST00000025999.7	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53183458	53191845	+	53132449	53191845	A5SS	0.2	50	50	ENSMUST00000025999.7	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53183458	53191845	+	53170165	53191845	A5SS	0.2	50	50	ENSMUST00000235846.2	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53186541	53205232	+	53186662	53205232	A5SS	0.12	50	50	ENSMUST00000237099.2	ENSMUSG00000025026.16	Add3	chr19	protein_coding	adducin 3 (gamma)
chr19	53237962	53253487	-	53237962	53243513	5pMXE	0.5	50	50	ENSMUST00000237869.2	ENSMUSG00000118314.2	1700001K23Rik	chr19	lncRNA	RIKEN cDNA 1700001K23 gene
chr19	53241946	53243513	-	53237962	53243513	A3SS	0.5	50	50	ENSMUST00000237869.2	ENSMUSG00000118314.2	1700001K23Rik	chr19	lncRNA	RIKEN cDNA 1700001K23 gene
chr19	53237384	53237758	-	53237384	53237817	A5SS	0.5	50	50	ENSMUST00000237869.2	ENSMUSG00000118314.2	1700001K23Rik	chr19	lncRNA	RIKEN cDNA 1700001K23 gene
chr19	53240583	53241676	-	53237816	53241676	A3SS	0.5	50	50	ENSMUST00000236696.2	ENSMUSG00000118314.2	1700001K23Rik	chr19	lncRNA	RIKEN cDNA 1700001K23 gene
chr19	53319914	53357973	+	53319914;53334911	53334882;53357973	ES	0.5	50	50	ENSMUST00000003870.15	ENSMUSG00000025025.15	Mxi1	chr19	protein_coding	MAX interactor 1, dimerization protein
chr19	53319914	53320447	+	53319914	53334882	A3SS	0.33	50	50	ENSMUST00000003870.15	ENSMUSG00000025025.15	Mxi1	chr19	protein_coding	MAX interactor 1, dimerization protein
chr19	53301732	53319782	+	53299404	53319782	A5SS	0.14	50	50	ENSMUST00000003870.15	ENSMUSG00000025025.15	Mxi1	chr19	protein_coding	MAX interactor 1, dimerization protein
chr19	53318151	53319782	+	53299404	53319782	A5SS	0.14	50	50	ENSMUST00000003870.15	ENSMUSG00000025025.15	Mxi1	chr19	protein_coding	MAX interactor 1, dimerization protein
chr19	53318226	53319782	+	53299404	53319782	A5SS	0.14	50	50	ENSMUST00000003870.15	ENSMUSG00000025025.15	Mxi1	chr19	protein_coding	MAX interactor 1, dimerization protein
chr19	53318236	53319782	+	53299404	53319782	A5SS	0.14	50	50	ENSMUST00000003870.15	ENSMUSG00000025025.15	Mxi1	chr19	protein_coding	MAX interactor 1, dimerization protein
chr19	53318382	53319782	+	53299404	53319782	A5SS	0.14	50	50	ENSMUST00000003870.15	ENSMUSG00000025025.15	Mxi1	chr19	protein_coding	MAX interactor 1, dimerization protein
chr19	53319031	53319782	+	53299404	53319782	A5SS	0.14	50	50	ENSMUST00000003870.15	ENSMUSG00000025025.15	Mxi1	chr19	protein_coding	MAX interactor 1, dimerization protein
chr19	53319914	53320447	+	53319914	53357973	A3SS	0.33	50	50	ENSMUST00000237480.2	ENSMUSG00000025025.15	Mxi1	chr19	protein_coding	MAX interactor 1, dimerization protein
chr19	53318151	53319782	+	53301732	53319782	A5SS	0.14	50	50	ENSMUST00000237480.2	ENSMUSG00000025025.15	Mxi1	chr19	protein_coding	MAX interactor 1, dimerization protein
chr19	53318226	53319782	+	53301732	53319782	A5SS	0.14	50	50	ENSMUST00000237480.2	ENSMUSG00000025025.15	Mxi1	chr19	protein_coding	MAX interactor 1, dimerization protein
chr19	53318236	53319782	+	53301732	53319782	A5SS	0.14	50	50	ENSMUST00000237480.2	ENSMUSG00000025025.15	Mxi1	chr19	protein_coding	MAX interactor 1, dimerization protein
chr19	53318382	53319782	+	53301732	53319782	A5SS	0.14	50	50	ENSMUST00000237480.2	ENSMUSG00000025025.15	Mxi1	chr19	protein_coding	MAX interactor 1, dimerization protein
chr19	53319031	53319782	+	53301732	53319782	A5SS	0.14	50	50	ENSMUST00000237480.2	ENSMUSG00000025025.15	Mxi1	chr19	protein_coding	MAX interactor 1, dimerization protein
chr19	53318226	53319782	+	53318151	53319782	A5SS	0.14	50	50	ENSMUST00000111737.3	ENSMUSG00000025025.15	Mxi1	chr19	protein_coding	MAX interactor 1, dimerization protein
chr19	53318236	53319782	+	53318151	53319782	A5SS	0.14	50	50	ENSMUST00000111737.3	ENSMUSG00000025025.15	Mxi1	chr19	protein_coding	MAX interactor 1, dimerization protein
chr19	53318382	53319782	+	53318151	53319782	A5SS	0.14	50	50	ENSMUST00000111737.3	ENSMUSG00000025025.15	Mxi1	chr19	protein_coding	MAX interactor 1, dimerization protein
chr19	53319031	53319782	+	53318151	53319782	A5SS	0.14	50	50	ENSMUST00000111737.3	ENSMUSG00000025025.15	Mxi1	chr19	protein_coding	MAX interactor 1, dimerization protein
chr19	53318226	53319782	+	53318236	53319782	A5SS	0.14	50	50	ENSMUST00000025998.15	ENSMUSG00000025025.15	Mxi1	chr19	protein_coding	MAX interactor 1, dimerization protein
chr19	53318382	53319782	+	53318236	53319782	A5SS	0.14	50	50	ENSMUST00000025998.15	ENSMUSG00000025025.15	Mxi1	chr19	protein_coding	MAX interactor 1, dimerization protein
chr19	53319031	53319782	+	53318236	53319782	A5SS	0.14	50	50	ENSMUST00000025998.15	ENSMUSG00000025025.15	Mxi1	chr19	protein_coding	MAX interactor 1, dimerization protein
chr19	53318382	53319782	+	53318226	53319782	A5SS	0.14	50	50	ENSMUST00000235880.2	ENSMUSG00000025025.15	Mxi1	chr19	protein_coding	MAX interactor 1, dimerization protein
chr19	53319031	53319782	+	53318226	53319782	A5SS	0.14	50	50	ENSMUST00000235880.2	ENSMUSG00000025025.15	Mxi1	chr19	protein_coding	MAX interactor 1, dimerization protein
chr19	53319031	53319782	+	53318382	53319782	A5SS	0.14	50	50	ENSMUST00000236973.2	ENSMUSG00000025025.15	Mxi1	chr19	protein_coding	MAX interactor 1, dimerization protein
chr19	53373027	53377734	-	53373027;53374987	53374804;53377734	ES	0.5	50	50	ENSMUST00000235830.2	ENSMUSG00000025024.8	Smndc1	chr19	protein_coding	survival motor neuron domain containing 1
chr19	53372149	53372885	-	53372166	53372885	A3SS	0.5	50	50	ENSMUST00000235830.2	ENSMUSG00000025024.8	Smndc1	chr19	protein_coding	survival motor neuron domain containing 1
chr19	53377853	53378294	-	53377853	53378847	A5SS	0.33	50	50	ENSMUST00000025997.7	ENSMUSG00000025024.8	Smndc1	chr19	protein_coding	survival motor neuron domain containing 1
chr19	53377853	53378578	-	53377853	53378847	A5SS	0.33	50	50	ENSMUST00000025997.7	ENSMUSG00000025024.8	Smndc1	chr19	protein_coding	survival motor neuron domain containing 1
chr19	53377853	53378578	-	53377853	53378294	5pMXE	0.33	50	50	ENSMUST00000237529.2	ENSMUSG00000025024.8	Smndc1	chr19	protein_coding	survival motor neuron domain containing 1
chr19	53434914	53435587	-	53434914;53435318	53435207;53435587	ES	0.5	50	50	ENSMUST00000180489.9	ENSMUSG00000097636.9	Mirt1	chr19	lncRNA	myocardial infarction associated transcript 1
chr19	53435744	53439844	-	53435744;53439623	53437706;53439844	ES	0.5	50	50	ENSMUST00000180489.9	ENSMUSG00000097636.9	Mirt1	chr19	lncRNA	myocardial infarction associated transcript 1
chr19	53440195	53442132	-	53440195	53451739	A5SS	0.5	50	50	ENSMUST00000180489.9	ENSMUSG00000097636.9	Mirt1	chr19	lncRNA	myocardial infarction associated transcript 1
chr19	53439623	53439844	-	53435744	53439844	A3SS	0.5	50	50	ENSMUST00000180667.3	ENSMUSG00000097636.9	Mirt1	chr19	lncRNA	myocardial infarction associated transcript 1
chr19	53435744	53437706	-	53435744	53439844	A5SS	0.5	50	50	ENSMUST00000180667.3	ENSMUSG00000097636.9	Mirt1	chr19	lncRNA	myocardial infarction associated transcript 1
chr19	53440155	53442132	-	53440195	53442132	A3SS	0.5	50	50	ENSMUST00000236192.2	ENSMUSG00000097636.9	Mirt1	chr19	lncRNA	myocardial infarction associated transcript 1
chr19	53442288	53442484	-	53442274	53442484	A3SS	0.5	50	50	ENSMUST00000236192.2	ENSMUSG00000097636.9	Mirt1	chr19	lncRNA	myocardial infarction associated transcript 1
chr19	53840247;53840830	53840785;53841935	+	53840247	53841935	cassetteExon	0.5	100	100	ENSMUST00000164202.9	ENSMUSG00000043639.16	Rbm20	chr19	protein_coding	RNA binding motif protein 20
chr19	53781877	53801679	+	53666023	53801679	A5SS	0.5	50	50	ENSMUST00000164202.9	ENSMUSG00000043639.16	Rbm20	chr19	protein_coding	RNA binding motif protein 20
chr19	53880887	53884432	+	53880887	53895880	A3SS	0.5	50	50	ENSMUST00000074371.13	ENSMUSG00000024975.14	Pdcd4	chr19	protein_coding	programmed cell death 4
chr19	53891919	53895880	+	53880887	53895880	A5SS	0.5	50	50	ENSMUST00000074371.13	ENSMUSG00000024975.14	Pdcd4	chr19	protein_coding	programmed cell death 4
chr19	53909712	53914966	+	53914744	53914966	A5SS&ES	0.5	50	50	ENSMUST00000074371.13	ENSMUSG00000024975.14	Pdcd4	chr19	protein_coding	programmed cell death 4
chr19	53882416	53884432	+	53880887	53884432	A5SS	0.5	50	50	ENSMUST00000235854.2	ENSMUSG00000024975.14	Pdcd4	chr19	protein_coding	programmed cell death 4
chr19	53920636	53932848	-	53920636;53932010	53931897;53932848	ES	0.5	50	50	ENSMUST00000135402.4	ENSMUSG00000084957.4	Bbip1	chr19	protein_coding	BBSome interacting protein 1
chr19	53920636;53922001	53921922;53931897	-	53920636	53931897	cassetteExon	0.5	100	100	ENSMUST00000135402.4	ENSMUSG00000084957.4	Bbip1	chr19	protein_coding	BBSome interacting protein 1
chr19	53920636;53927945	53927789;53931897	-	53920636	53931897	cassetteExon	0.5	100	100	ENSMUST00000135402.4	ENSMUSG00000084957.4	Bbip1	chr19	protein_coding	BBSome interacting protein 1
chr19	53932010	53932587	-	53932010	53932848	A5SS	0.5	50	50	ENSMUST00000135402.4	ENSMUSG00000084957.4	Bbip1	chr19	protein_coding	BBSome interacting protein 1
chr19	53920636;53927945	53927789;53931897	-	53920636;53922001	53921922;53931897	MXE	0.5	100	100	ENSMUST00000236885.2	ENSMUSG00000084957.4	Bbip1	chr19	protein_coding	BBSome interacting protein 1
chr19	53920636	53921922	-	53920636	53932848	A5SS	0.25	50	50	ENSMUST00000235688.2	ENSMUSG00000084957.4	Bbip1	chr19	protein_coding	BBSome interacting protein 1
chr19	53920636	53927789	-	53920636	53932848	A5SS	0.25	50	50	ENSMUST00000235688.2	ENSMUSG00000084957.4	Bbip1	chr19	protein_coding	BBSome interacting protein 1
chr19	53920636	53931897	-	53922001	53931897	A3SS	0.33	50	50	ENSMUST00000237049.2	ENSMUSG00000084957.4	Bbip1	chr19	protein_coding	BBSome interacting protein 1
chr19	53927945	53931897	-	53922001	53931897	A3SS	0.33	50	50	ENSMUST00000237049.2	ENSMUSG00000084957.4	Bbip1	chr19	protein_coding	BBSome interacting protein 1
chr19	53976814	54005980	+	53976814;53991577	53991440;54005980	ES	0.5	50	50	ENSMUST00000169861.9	ENSMUSG00000024976.15	Shoc2	chr19	protein_coding	Shoc2, leucine rich repeat scaffold protein
chr19	53991577	54014781	+	53991577;54006110	54005980;54014781	ES	0.5	50	50	ENSMUST00000169861.9	ENSMUSG00000024976.15	Shoc2	chr19	protein_coding	Shoc2, leucine rich repeat scaffold protein
chr19	53933444	53975885	+	53932833	53975885	A5SS	0.33	50	50	ENSMUST00000169861.9	ENSMUSG00000024976.15	Shoc2	chr19	protein_coding	Shoc2, leucine rich repeat scaffold protein
chr19	53938374	53975885	+	53932833	53975885	A5SS	0.33	50	50	ENSMUST00000169861.9	ENSMUSG00000024976.15	Shoc2	chr19	protein_coding	Shoc2, leucine rich repeat scaffold protein
chr19	53933444;53938374	53938250;53975885	+	53933444	53975885	cassetteExon	0.5	100	100	ENSMUST00000025932.9	ENSMUSG00000024976.15	Shoc2	chr19	protein_coding	Shoc2, leucine rich repeat scaffold protein
chr19	53991577;54014969	54014781;54016149	+	53991577	54016149	cassetteExon	0.5	100	100	ENSMUST00000235945.2	ENSMUSG00000024976.15	Shoc2	chr19	protein_coding	Shoc2, leucine rich repeat scaffold protein
chr19	53976814	54005980	+	53976814	53991440	A3SS&ES	0.5	50	50	ENSMUST00000235945.2	ENSMUSG00000024976.15	Shoc2	chr19	protein_coding	Shoc2, leucine rich repeat scaffold protein
chr19	53991577	54005980	+	53991577	54016149	A3SS	0.33	50	50	ENSMUST00000235945.2	ENSMUSG00000024976.15	Shoc2	chr19	protein_coding	Shoc2, leucine rich repeat scaffold protein
chr19	53976814;53991577	53991440;54014781	+	53976814;54006110	54005980;54014781	MXE	0.5	100	100	ENSMUST00000237908.2	ENSMUSG00000024976.15	Shoc2	chr19	protein_coding	Shoc2, leucine rich repeat scaffold protein
chr19	53976814;53991577	53991440;54016149	+	53976814;54014969	54005980;54016149	MXE	0.5	100	100	ENSMUST00000237908.2	ENSMUSG00000024976.15	Shoc2	chr19	protein_coding	Shoc2, leucine rich repeat scaffold protein
chr19	53965085	53973296	-	53965085;53965680	53965337;53973296	ES	0.5	50	50	ENSMUST00000237486.2	ENSMUSG00000117981.2	4930484I04Rik	chr19	lncRNA	RIKEN cDNA 4930484I04 gene
chr19	55086059	55115446	-	55086059	55091398	5pMXE	0.33	50	50	ENSMUST00000236859.2	ENSMUSG00000024978.12	Gpam	chr19	protein_coding	glycerol-3-phosphate acyltransferase, mitochondrial
chr19	55064111	55064723	-	55064107	55064723	A3SS	0.5	50	50	ENSMUST00000236859.2	ENSMUSG00000024978.12	Gpam	chr19	protein_coding	glycerol-3-phosphate acyltransferase, mitochondrial
chr19	55086059	55087761	-	55086059	55091398	A5SS	0.33	50	50	ENSMUST00000236859.2	ENSMUSG00000024978.12	Gpam	chr19	protein_coding	glycerol-3-phosphate acyltransferase, mitochondrial
chr19	55086059	55115446	-	55086059;55091559	55091398;55115446	ES	0.33	50	50	ENSMUST00000235957.2	ENSMUSG00000024978.12	Gpam	chr19	protein_coding	glycerol-3-phosphate acyltransferase, mitochondrial
chr19	55091559;55093110	55093059;55115446	-	55091559	55115446	cassetteExon	0.5	100	100	ENSMUST00000235957.2	ENSMUSG00000024978.12	Gpam	chr19	protein_coding	glycerol-3-phosphate acyltransferase, mitochondrial
chr19	55086059	55115446	-	55086059	55087761	5pMXE	0.33	50	50	ENSMUST00000061856.6	ENSMUSG00000024978.12	Gpam	chr19	protein_coding	glycerol-3-phosphate acyltransferase, mitochondrial
chr19	55093110	55115446	-	55086059	55115446	A3SS	0.33	50	50	ENSMUST00000236422.2	ENSMUSG00000024978.12	Gpam	chr19	protein_coding	glycerol-3-phosphate acyltransferase, mitochondrial
chr19	55172291	55172365	+	55172291	55172395	A3SS	0.5	50	50	ENSMUST00000154886.8	ENSMUSG00000024979.14	Tectb	chr19	protein_coding	tectorin beta
chr19	55180719	55180996	+	55180019	55180996	A5SS	0.5	50	50	ENSMUST00000120936.8	ENSMUSG00000024979.14	Tectb	chr19	protein_coding	tectorin beta
chr19	55181122	55182272	+	55181068	55182272	A5SS	0.33	50	50	ENSMUST00000120936.8	ENSMUSG00000024979.14	Tectb	chr19	protein_coding	tectorin beta
chr19	55181341	55182272	+	55181068	55182272	A5SS	0.33	50	50	ENSMUST00000120936.8	ENSMUSG00000024979.14	Tectb	chr19	protein_coding	tectorin beta
chr19	55181341	55182272	+	55181122	55182272	A5SS	0.33	50	50	ENSMUST00000124545.2	ENSMUSG00000024979.14	Tectb	chr19	protein_coding	tectorin beta
chr19	55242598	55257076	+	55240508	55257076	A5SS	0.5	50	50	ENSMUST00000225551.2	ENSMUSG00000024981.7	Acsl5	chr19	protein_coding	acyl-CoA synthetase long-chain family member 5
chr19	55278116;55287320	55287127;55290990	-	55278116	55290990	cassetteExon	0.5	100	100	ENSMUST00000225963.2	ENSMUSG00000024982.11	Zdhhc6	chr19	protein_coding	zinc finger, DHHC domain containing 6
chr19	55300216;55301326	55301199;55301621	-	55300216	55301621	cassetteExon	0.5	100	100	ENSMUST00000225963.2	ENSMUSG00000024982.11	Zdhhc6	chr19	protein_coding	zinc finger, DHHC domain containing 6
chr19	55268994	55276732	-	55273954	55276732	A3SS&ES	0.5	50	50	ENSMUST00000225963.2	ENSMUSG00000024982.11	Zdhhc6	chr19	protein_coding	zinc finger, DHHC domain containing 6
chr19	55285510	55290990	-	55278116	55290990	A3SS	0.25	50	50	ENSMUST00000225963.2	ENSMUSG00000024982.11	Zdhhc6	chr19	protein_coding	zinc finger, DHHC domain containing 6
chr19	55290301	55290990	-	55278116	55290990	A3SS	0.25	50	50	ENSMUST00000225963.2	ENSMUSG00000024982.11	Zdhhc6	chr19	protein_coding	zinc finger, DHHC domain containing 6
chr19	55303204	55304112	-	55303204	55304228	A5SS	0.5	50	50	ENSMUST00000225963.2	ENSMUSG00000024982.11	Zdhhc6	chr19	protein_coding	zinc finger, DHHC domain containing 6
chr19	55285510	55290990	-	55287320	55290990	A3SS&ES	0.25	50	50	ENSMUST00000226103.2	ENSMUSG00000024982.11	Zdhhc6	chr19	protein_coding	zinc finger, DHHC domain containing 6
chr19	55290301	55290990	-	55287320	55290990	A3SS	0.25	50	50	ENSMUST00000226103.2	ENSMUSG00000024982.11	Zdhhc6	chr19	protein_coding	zinc finger, DHHC domain containing 6
chr19	55290301	55290990	-	55285510	55290990	A3SS	0.25	50	50	ENSMUST00000225495.2	ENSMUSG00000024982.11	Zdhhc6	chr19	protein_coding	zinc finger, DHHC domain containing 6
chr19	55278116	55290990	-	55287320	55290990	3pMXE	0.25	50	50	ENSMUST00000224897.2	ENSMUSG00000024982.11	Zdhhc6	chr19	protein_coding	zinc finger, DHHC domain containing 6
chr19	55487736	55612249	+	55487736	55564906	3pMXE	0.5	50	50	ENSMUST00000225529.2	ENSMUSG00000024983.11	Vti1a	chr19	protein_coding	vesicle transport through interaction with t-SNAREs 1A
chr19	55369451;55375641	55375621;55380216	+	55369451	55380216	cassetteExon	0.5	100	100	ENSMUST00000225529.2	ENSMUSG00000024983.11	Vti1a	chr19	protein_coding	vesicle transport through interaction with t-SNAREs 1A
chr19	55316888	55318510	+	55316888	55369374	A3SS	0.33	50	50	ENSMUST00000225529.2	ENSMUSG00000024983.11	Vti1a	chr19	protein_coding	vesicle transport through interaction with t-SNAREs 1A
chr19	55316888	55354725	+	55316888	55369374	A3SS	0.33	50	50	ENSMUST00000225529.2	ENSMUSG00000024983.11	Vti1a	chr19	protein_coding	vesicle transport through interaction with t-SNAREs 1A
chr19	55380300	55419665	+	55380300	55486943	A3SS	0.5	50	50	ENSMUST00000225529.2	ENSMUSG00000024983.11	Vti1a	chr19	protein_coding	vesicle transport through interaction with t-SNAREs 1A
chr19	55316888	55318510	+	55316888	55354725	A3SS	0.33	50	50	ENSMUST00000226069.2	ENSMUSG00000024983.11	Vti1a	chr19	protein_coding	vesicle transport through interaction with t-SNAREs 1A
chr19	55914481	55919866	+	55914481;55915188	55915114;55919866	ES	0.16	50	50	ENSMUST00000111662.11	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55731629;55743514	55743446;55806196	+	55731629	55806196	cassetteExon	0.5	100	100	ENSMUST00000111662.11	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55806297;55851993	55851850;55896855	+	55806297	55896855	cassetteExon	0.5	100	100	ENSMUST00000111662.11	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55912376;55913012	55912962;55914409	+	55912376	55914409	cassetteExon	0.5	100	100	ENSMUST00000111662.11	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55912376;55913012	55912962;55919866	+	55912376;55915188	55914409;55919866	MXE	0.5	100	100	ENSMUST00000111662.11	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55914481;55916186	55916162;55919866	+	55914481;55915188	55915114;55919866	MXE	0.5	100	100	ENSMUST00000111662.11	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55901077	55905771	+	55901077	55905786	A3SS	0.5	50	50	ENSMUST00000111662.11	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55914481	55915116	+	55914481	55915114	A3SS	0.25	50	50	ENSMUST00000111662.11	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55881896	55896855	+	55806297	55896855	A5SS	0.12	50	50	ENSMUST00000111662.11	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55883163	55896855	+	55806297	55896855	A5SS	0.12	50	50	ENSMUST00000111662.11	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55884069	55896855	+	55806297	55896855	A5SS	0.12	50	50	ENSMUST00000111662.11	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55884173	55896855	+	55806297	55896855	A5SS	0.12	50	50	ENSMUST00000111662.11	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55886865	55896855	+	55806297	55896855	A5SS	0.12	50	50	ENSMUST00000111662.11	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55887081	55896855	+	55806297	55896855	A5SS	0.12	50	50	ENSMUST00000111662.11	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55899101	55900991	+	55899113	55900991	A5SS	0.5	50	50	ENSMUST00000111662.11	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55908050	55919866	+	55908050;55912376	55912328;55919866	ES	0.16	50	50	ENSMUST00000041717.14	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55912376;55913012	55912962;55919866	+	55912376	55919866	cassetteExon	0.5	100	100	ENSMUST00000041717.14	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55912376;55914481	55914409;55919866	+	55912376	55919866	cassetteExon	0.5	100	100	ENSMUST00000041717.14	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55915188	55919866	+	55912376	55919866	A5SS	0.16	50	50	ENSMUST00000041717.14	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55916186	55919866	+	55912376	55919866	A5SS	0.16	50	50	ENSMUST00000041717.14	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55908050	55919866	+	55908050	55912328	3pMXE	0.5	50	50	ENSMUST00000111654.8	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55913012	55919866	+	55908050	55919866	A5SS	0.16	50	50	ENSMUST00000111658.10	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55914481	55919866	+	55908050	55919866	A5SS	0.16	50	50	ENSMUST00000111658.10	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55915188	55919866	+	55908050	55919866	A5SS	0.16	50	50	ENSMUST00000111658.10	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55916186	55919866	+	55908050	55919866	A5SS	0.16	50	50	ENSMUST00000111658.10	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55881896	55896855	+	55851993	55896855	A5SS	0.12	50	50	ENSMUST00000111651.8	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55883163	55896855	+	55851993	55896855	A5SS	0.12	50	50	ENSMUST00000111651.8	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55884069	55896855	+	55851993	55896855	A5SS	0.12	50	50	ENSMUST00000111651.8	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55884173	55896855	+	55851993	55896855	A5SS	0.12	50	50	ENSMUST00000111651.8	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55886865	55896855	+	55851993	55896855	A5SS	0.12	50	50	ENSMUST00000111651.8	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55887081	55896855	+	55851993	55896855	A5SS	0.12	50	50	ENSMUST00000111651.8	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55914481	55919866	+	55914481;55915188	55915116;55919866	ES	0.16	50	50	ENSMUST00000153888.9	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55914481;55916186	55916162;55919866	+	55914481;55915188	55915116;55919866	MXE	0.5	100	100	ENSMUST00000153888.9	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55914481	55919866	+	55914481;55916186	55916162;55919866	ES	0.16	50	50	ENSMUST00000127233.9	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55912376;55913012	55912962;55919866	+	55912376;55916186	55914409;55919866	MXE	0.5	100	100	ENSMUST00000127233.9	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55912376;55914481	55914409;55919866	+	55912376;55913012	55912962;55919866	MXE	0.5	100	100	ENSMUST00000061496.17	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55913012;55914481	55914409;55919866	+	55913012	55919866	cassetteExon	0.5	100	100	ENSMUST00000061496.17	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55915188	55919866	+	55913012	55919866	A5SS	0.16	50	50	ENSMUST00000061496.17	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55916186	55919866	+	55913012	55919866	A5SS	0.16	50	50	ENSMUST00000061496.17	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55883163	55896855	+	55881896	55896855	A5SS	0.12	50	50	ENSMUST00000145249.8	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55884069	55896855	+	55881896	55896855	A5SS	0.12	50	50	ENSMUST00000145249.8	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55884173	55896855	+	55881896	55896855	A5SS	0.12	50	50	ENSMUST00000145249.8	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55886865	55896855	+	55881896	55896855	A5SS	0.12	50	50	ENSMUST00000145249.8	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55887081	55896855	+	55881896	55896855	A5SS	0.12	50	50	ENSMUST00000145249.8	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55884069	55896855	+	55883163	55896855	A5SS	0.12	50	50	ENSMUST00000142291.8	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55884173	55896855	+	55883163	55896855	A5SS	0.12	50	50	ENSMUST00000142291.8	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55886865	55896855	+	55883163	55896855	A5SS	0.12	50	50	ENSMUST00000142291.8	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55887081	55896855	+	55883163	55896855	A5SS	0.12	50	50	ENSMUST00000142291.8	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55884173	55896855	+	55884069	55896855	A5SS	0.12	50	50	ENSMUST00000111646.8	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55886865	55896855	+	55884069	55896855	A5SS	0.12	50	50	ENSMUST00000111646.8	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55887081	55896855	+	55884069	55896855	A5SS	0.12	50	50	ENSMUST00000111646.8	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55886865	55896855	+	55884173	55896855	A5SS	0.12	50	50	ENSMUST00000127653.8	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55887081	55896855	+	55884173	55896855	A5SS	0.12	50	50	ENSMUST00000127653.8	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	55887081	55896855	+	55886865	55896855	A5SS	0.12	50	50	ENSMUST00000143334.2	ENSMUSG00000024985.21	Tcf7l2	chr19	protein_coding	transcription factor 7 like 2, T cell specific, HMG box
chr19	56094881	56095725	+	56094881	56095729	A3SS	0.5	50	50	ENSMUST00000235362.2	ENSMUSG00000117695.2	Gm31912	chr19	lncRNA	predicted gene, 31912
chr19	56286483	56297269	+	56286483;56295315	56295205;56297269	ES	0.5	50	50	ENSMUST00000078284.13	ENSMUSG00000025075.15	Habp2	chr19	protein_coding	hyaluronic acid binding protein 2
chr19	56301398	56303659	+	56301398;56302662	56302407;56303659	ES	0.5	50	50	ENSMUST00000078284.13	ENSMUSG00000025075.15	Habp2	chr19	protein_coding	hyaluronic acid binding protein 2
chr19	56302662	56304715	+	56302662;56303801	56303659;56304715	ES	0.5	50	50	ENSMUST00000078284.13	ENSMUSG00000025075.15	Habp2	chr19	protein_coding	hyaluronic acid binding protein 2
chr19	56299653	56300210	+	56299653	56300103	A3SS	0.5	50	50	ENSMUST00000078284.13	ENSMUSG00000025075.15	Habp2	chr19	protein_coding	hyaluronic acid binding protein 2
chr19	56301398	56302422	+	56301398	56302407	A3SS	0.33	50	50	ENSMUST00000078284.13	ENSMUSG00000025075.15	Habp2	chr19	protein_coding	hyaluronic acid binding protein 2
chr19	56301398;56302662	56302407;56304715	+	56301398;56303801	56303659;56304715	MXE	0.5	100	100	ENSMUST00000171341.8	ENSMUSG00000025075.15	Habp2	chr19	protein_coding	hyaluronic acid binding protein 2
chr19	56301398;56302662	56302422;56303659	+	56301398	56303659	cassetteExon	0.5	100	100	ENSMUST00000171341.8	ENSMUSG00000025075.15	Habp2	chr19	protein_coding	hyaluronic acid binding protein 2
chr19	56301398;56302662	56302422;56304715	+	56301398;56303801	56303659;56304715	MXE	0.5	100	100	ENSMUST00000171341.8	ENSMUSG00000025075.15	Habp2	chr19	protein_coding	hyaluronic acid binding protein 2
chr19	56352459	56353824	-	56352459;56352841	56352734;56353824	ES	0.5	50	50	ENSMUST00000167239.8	ENSMUSG00000049134.16	Nrap	chr19	protein_coding	nebulin-related anchoring protein
chr19	56377268	56378238	-	56377268;56377916	56377822;56378238	ES	0.5	50	50	ENSMUST00000167239.8	ENSMUSG00000049134.16	Nrap	chr19	protein_coding	nebulin-related anchoring protein
chr19	56361346;56362900	56362796;56366487	-	56361346	56366487	cassetteExon	0.5	100	100	ENSMUST00000167239.8	ENSMUSG00000049134.16	Nrap	chr19	protein_coding	nebulin-related anchoring protein
chr19	56317031	56317428	-	56309448	56317428	A3SS	0.5	50	50	ENSMUST00000167239.8	ENSMUSG00000049134.16	Nrap	chr19	protein_coding	nebulin-related anchoring protein
chr19	56309448	56310155	-	56309448	56317428	A5SS	0.5	50	50	ENSMUST00000167239.8	ENSMUSG00000049134.16	Nrap	chr19	protein_coding	nebulin-related anchoring protein
chr19	56310466	56315627	-	56310466;56312427	56312320;56315627	ES	0.5	50	50	ENSMUST00000073536.13	ENSMUSG00000049134.16	Nrap	chr19	protein_coding	nebulin-related anchoring protein
chr19	56342659	56343914	-	56323769	56343914	A3SS	0.5	50	50	ENSMUST00000169099.8	ENSMUSG00000049134.16	Nrap	chr19	protein_coding	nebulin-related anchoring protein
chr19	56323769	56324475	-	56323769	56343914	A5SS	0.5	50	50	ENSMUST00000169099.8	ENSMUSG00000049134.16	Nrap	chr19	protein_coding	nebulin-related anchoring protein
chr19	56392957	56396785	+	56392957	56421674	A3SS	0.5	50	50	ENSMUST00000026062.10	ENSMUSG00000025076.13	Casp7	chr19	protein_coding	caspase 7
chr19	56414296	56421674	+	56392957	56421674	A5SS	0.33	50	50	ENSMUST00000026062.10	ENSMUSG00000025076.13	Casp7	chr19	protein_coding	caspase 7
chr19	56415827	56421674	+	56392957	56421674	A5SS	0.33	50	50	ENSMUST00000026062.10	ENSMUSG00000025076.13	Casp7	chr19	protein_coding	caspase 7
chr19	56415827	56421674	+	56414296	56421674	A5SS	0.33	50	50	ENSMUST00000238892.2	ENSMUSG00000025076.13	Casp7	chr19	protein_coding	caspase 7
chr19	56459475	56460130	+	56459475	56460133	A3SS	0.5	50	50	ENSMUST00000178590.9	ENSMUSG00000035818.15	Plekhs1	chr19	protein_coding	pleckstrin homology domain containing, family S member 1
chr19	56461696	56462573	+	56461696	56462570	A3SS	0.5	50	50	ENSMUST00000178590.9	ENSMUSG00000035818.15	Plekhs1	chr19	protein_coding	pleckstrin homology domain containing, family S member 1
chr19	56467419	56468234	+	56466970	56468234	A5SS	0.5	50	50	ENSMUST00000178590.9	ENSMUSG00000035818.15	Plekhs1	chr19	protein_coding	pleckstrin homology domain containing, family S member 1
chr19	56519790	56525560	-	56519790;56520673	56520255;56525560	ES	0.5	50	50	ENSMUST00000183143.8	ENSMUSG00000025077.14	Dclre1a	chr19	protein_coding	DNA cross-link repair 1A
chr19	56528723	56529937	-	56528754	56529937	A3SS	0.5	50	50	ENSMUST00000183143.8	ENSMUSG00000025077.14	Dclre1a	chr19	protein_coding	DNA cross-link repair 1A
chr19	56534078	56535069	-	56533339	56535069	A3SS	0.5	50	50	ENSMUST00000183143.8	ENSMUSG00000025077.14	Dclre1a	chr19	protein_coding	DNA cross-link repair 1A
chr19	56536135	56536406	-	56536135	56536619	A5SS	0.5	50	50	ENSMUST00000182276.2	ENSMUSG00000025077.14	Dclre1a	chr19	protein_coding	DNA cross-link repair 1A
chr19	56576701;56577852	56577726;56580008	+	56576701	56580008	cassetteExon	0.5	100	100	ENSMUST00000071423.7	ENSMUSG00000025078.10	Nhlrc2	chr19	protein_coding	NHL repeat containing 2
chr19	56559303	56563249	+	56559303	56563190	A3SS	0.5	50	50	ENSMUST00000071423.7	ENSMUSG00000025078.10	Nhlrc2	chr19	protein_coding	NHL repeat containing 2
chr19	56795517	56796493	-	56795517	56796410	A5SS	0.5	50	50	ENSMUST00000118592.8	ENSMUSG00000035173.15	Ccdc186	chr19	protein_coding	coiled-coil domain containing 186
chr19	56802121	56810420	-	56797753	56810420	A3SS	0.5	50	50	ENSMUST00000140184.2	ENSMUSG00000035173.15	Ccdc186	chr19	protein_coding	coiled-coil domain containing 186
chr19	56797753	56798671	-	56797753	56810420	A5SS	0.5	50	50	ENSMUST00000140184.2	ENSMUSG00000035173.15	Ccdc186	chr19	protein_coding	coiled-coil domain containing 186
chr19	56814735	56819473	+	56814696	56819473	A5SS	0.33	50	50	ENSMUST00000111606.8	ENSMUSG00000025081.14	Tdrd1	chr19	protein_coding	tudor domain containing 1
chr19	56814906	56819473	+	56814696	56819473	A5SS	0.33	50	50	ENSMUST00000111606.8	ENSMUSG00000025081.14	Tdrd1	chr19	protein_coding	tudor domain containing 1
chr19	56814906	56819473	+	56814735	56819473	A5SS	0.33	50	50	ENSMUST00000078723.11	ENSMUSG00000025081.14	Tdrd1	chr19	protein_coding	tudor domain containing 1
chr19	56918693;56922232	56922149;56925667	-	56918693	56925667	cassetteExon	0.5	100	100	ENSMUST00000118800.8	ENSMUSG00000025083.19	Afap1l2	chr19	protein_coding	actin filament associated protein 1-like 2
chr19	56938698;56990735	56990682;56996583	-	56938698	56996583	cassetteExon	0.5	100	100	ENSMUST00000118800.8	ENSMUSG00000025083.19	Afap1l2	chr19	protein_coding	actin filament associated protein 1-like 2
chr19	56953291	56996583	-	56938698	56996583	A3SS	0.33	50	50	ENSMUST00000118800.8	ENSMUSG00000025083.19	Afap1l2	chr19	protein_coding	actin filament associated protein 1-like 2
chr19	56938698	56952262	-	56938698	56996583	A5SS	0.2	50	50	ENSMUST00000118800.8	ENSMUSG00000025083.19	Afap1l2	chr19	protein_coding	actin filament associated protein 1-like 2
chr19	56938698	56977476	-	56938698	56996583	A5SS	0.2	50	50	ENSMUST00000118800.8	ENSMUSG00000025083.19	Afap1l2	chr19	protein_coding	actin filament associated protein 1-like 2
chr19	56938698	56989352	-	56938698	56996583	A5SS	0.2	50	50	ENSMUST00000118800.8	ENSMUSG00000025083.19	Afap1l2	chr19	protein_coding	actin filament associated protein 1-like 2
chr19	56953291	56996583	-	56990735	56996583	A3SS&ES	0.33	50	50	ENSMUST00000111584.9	ENSMUSG00000025083.19	Afap1l2	chr19	protein_coding	actin filament associated protein 1-like 2
chr19	56979559	56990682	-	56938698	56990682	A3SS	0.5	50	50	ENSMUST00000111584.9	ENSMUSG00000025083.19	Afap1l2	chr19	protein_coding	actin filament associated protein 1-like 2
chr19	56938698	56952262	-	56938698	56990682	A5SS	0.2	50	50	ENSMUST00000111584.9	ENSMUSG00000025083.19	Afap1l2	chr19	protein_coding	actin filament associated protein 1-like 2
chr19	56938698	56977476	-	56938698	56990682	A5SS	0.2	50	50	ENSMUST00000111584.9	ENSMUSG00000025083.19	Afap1l2	chr19	protein_coding	actin filament associated protein 1-like 2
chr19	56938698	56989352	-	56938698	56990682	A5SS	0.2	50	50	ENSMUST00000111584.9	ENSMUSG00000025083.19	Afap1l2	chr19	protein_coding	actin filament associated protein 1-like 2
chr19	56938698;56990735	56990682;56996583	-	56938698;56953291	56952262;56996583	MXE	0.5	100	100	ENSMUST00000122359.8	ENSMUSG00000025083.19	Afap1l2	chr19	protein_coding	actin filament associated protein 1-like 2
chr19	56938698	56977476	-	56938698	56952262	A5SS&ES	0.2	50	50	ENSMUST00000122359.8	ENSMUSG00000025083.19	Afap1l2	chr19	protein_coding	actin filament associated protein 1-like 2
chr19	56938698	56989352	-	56938698	56952262	A5SS&ES	0.2	50	50	ENSMUST00000122359.8	ENSMUSG00000025083.19	Afap1l2	chr19	protein_coding	actin filament associated protein 1-like 2
chr19	56938698	56989352	-	56938698	56977476	A5SS&ES	0.2	50	50	ENSMUST00000148049.8	ENSMUSG00000025083.19	Afap1l2	chr19	protein_coding	actin filament associated protein 1-like 2
chr19	57033404	57037894	-	57033404;57035497	57035357;57037894	ES	0.25	50	50	ENSMUST00000079360.12	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57039666	57049685	-	57039666;57047636	57047517;57049685	ES	0.33	50	50	ENSMUST00000079360.12	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57057369	57065846	-	57057369;57062334	57062287;57065846	ES	0.5	50	50	ENSMUST00000079360.12	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57161891	57227609	-	57161891	57204146	5pMXE	0.2	50	50	ENSMUST00000079360.12	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57161891	57303125	-	57161891	57204146	5pMXE	0.2	50	50	ENSMUST00000079360.12	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57030403	57031429	-	57030407	57031429	A3SS	0.5	50	50	ENSMUST00000079360.12	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57035503	57037894	-	57035497	57037894	A3SS	0.25	50	50	ENSMUST00000079360.12	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57036865	57037894	-	57035497	57037894	A3SS	0.25	50	50	ENSMUST00000079360.12	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57119419	57121294	-	57072035	57121294	A3SS	0.5	50	50	ENSMUST00000079360.12	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57072035	57107184	-	57072035	57121294	A5SS	0.5	50	50	ENSMUST00000079360.12	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57123140	57124116	-	57123140	57140705	A5SS	0.5	50	50	ENSMUST00000079360.12	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57161891	57170658	-	57161891	57204146	A5SS	0.2	50	50	ENSMUST00000079360.12	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57161891	57185731	-	57161891	57204146	A5SS	0.2	50	50	ENSMUST00000079360.12	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57056678	57068245	-	57056678;57057369	57057292;57068245	ES	0.33	50	50	ENSMUST00000111529.8	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57037941;57039666	57039562;57049685	-	57037941	57049685	cassetteExon	0.5	100	100	ENSMUST00000111529.8	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57057369;57065929	57065846;57068245	-	57057369	57068245	cassetteExon	0.5	100	100	ENSMUST00000111529.8	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57047636	57049685	-	57037941	57049685	A3SS	0.33	50	50	ENSMUST00000111529.8	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57104897	57107184	-	57072035	57107184	A3SS	0.5	50	50	ENSMUST00000111529.8	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57057369	57062287	-	57057369	57068245	A5SS	0.33	50	50	ENSMUST00000111529.8	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57161891	57227609	-	57161891	57185731	5pMXE	0.2	50	50	ENSMUST00000099294.9	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57161891	57303125	-	57161891	57185731	5pMXE	0.2	50	50	ENSMUST00000099294.9	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57033404;57035503	57035357;57037894	-	57033404	57037894	cassetteExon	0.5	100	100	ENSMUST00000099294.9	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57036865	57037894	-	57033404	57037894	A3SS	0.25	50	50	ENSMUST00000099294.9	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57161891	57170658	-	57161891	57185731	A5SS	0.2	50	50	ENSMUST00000099294.9	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57161891	57303125	-	57161891	57227609	5pMXE	0.2	50	50	ENSMUST00000111559.8	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57161891	57170658	-	57161891	57227609	A5SS	0.2	50	50	ENSMUST00000111559.8	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57065929	57068245	-	57056678	57068245	A3SS	0.33	50	50	ENSMUST00000111526.8	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57035503;57036865	57036799;57037894	-	57035503	57037894	cassetteExon	0.5	100	100	ENSMUST00000111558.8	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57161891	57170658	-	57161891	57303125	A5SS	0.2	50	50	ENSMUST00000156316.8	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57033404	57037894	-	57033404	57035357	5pMXE	0.5	50	50	ENSMUST00000137389.8	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57057369	57068245	-	57065929	57068245	3pMXE	0.33	50	50	ENSMUST00000134430.8	ENSMUSG00000025085.17	Ablim1	chr19	protein_coding	actin-binding LIM protein 1
chr19	57361834	57366981	+	57361834	57369032	A3SS	0.5	50	50	ENSMUST00000237170.2	ENSMUSG00000033478.6	Fam160b1	chr19	protein_coding	family with sequence similarity 160, member B1
chr19	57367607	57369032	+	57361834	57369032	A5SS	0.5	50	50	ENSMUST00000237170.2	ENSMUSG00000033478.6	Fam160b1	chr19	protein_coding	family with sequence similarity 160, member B1
chr19	57441628	57452802	+	57441628;57446620	57446522;57452802	ES	0.5	50	50	ENSMUST00000026073.14	ENSMUSG00000025086.14	Trub1	chr19	protein_coding	TruB pseudouridine (psi) synthase family member 1
chr19	57473644	57473784	+	57473644	57475697	A3SS	0.5	50	50	ENSMUST00000026073.14	ENSMUSG00000025086.14	Trub1	chr19	protein_coding	TruB pseudouridine (psi) synthase family member 1
chr19	57498831	57500288	+	57498831;57499923	57499720;57500288	ES	0.5	50	50	ENSMUST00000234319.2	ENSMUSG00000117655.2	6720468P15Rik	chr19	lncRNA	RIKEN cDNA 6720468P15 gene
chr19	57486247	57497580	+	57485893	57497580	A5SS	0.25	50	50	ENSMUST00000234319.2	ENSMUSG00000117655.2	6720468P15Rik	chr19	lncRNA	RIKEN cDNA 6720468P15 gene
chr19	57493506	57497580	+	57485893	57497580	A5SS	0.25	50	50	ENSMUST00000234319.2	ENSMUSG00000117655.2	6720468P15Rik	chr19	lncRNA	RIKEN cDNA 6720468P15 gene
chr19	57497376	57497580	+	57485893	57497580	A5SS	0.25	50	50	ENSMUST00000234319.2	ENSMUSG00000117655.2	6720468P15Rik	chr19	lncRNA	RIKEN cDNA 6720468P15 gene
chr19	57497604	57498531	+	57497667	57498531	A5SS	0.5	50	50	ENSMUST00000234319.2	ENSMUSG00000117655.2	6720468P15Rik	chr19	lncRNA	RIKEN cDNA 6720468P15 gene
chr19	57486247	57497580	+	57486247;57493506	57493250;57497580	ES	0.33	50	50	ENSMUST00000234346.2	ENSMUSG00000117655.2	6720468P15Rik	chr19	lncRNA	RIKEN cDNA 6720468P15 gene
chr19	57486247;57490091	57489855;57493250	+	57486247	57493250	cassetteExon	0.5	100	100	ENSMUST00000234346.2	ENSMUSG00000117655.2	6720468P15Rik	chr19	lncRNA	RIKEN cDNA 6720468P15 gene
chr19	57497376	57497580	+	57493506	57497580	A5SS	0.33	50	50	ENSMUST00000234346.2	ENSMUSG00000117655.2	6720468P15Rik	chr19	lncRNA	RIKEN cDNA 6720468P15 gene
chr19	57486247	57489855	+	57486247	57497580	A3SS	0.33	50	50	ENSMUST00000234049.2	ENSMUSG00000117655.2	6720468P15Rik	chr19	lncRNA	RIKEN cDNA 6720468P15 gene
chr19	57497376	57497580	+	57486247	57497580	A5SS	0.25	50	50	ENSMUST00000234049.2	ENSMUSG00000117655.2	6720468P15Rik	chr19	lncRNA	RIKEN cDNA 6720468P15 gene
chr19	58289010	58440401	-	58289010;58381019	58381005;58440401	ES	0.5	50	50	ENSMUST00000026076.14	ENSMUSG00000025089.16	Gfra1	chr19	protein_coding	glial cell line derived neurotrophic factor family receptor alpha 1
chr19	58443026	58443893	-	58443026	58443630	5pMXE	0.2	50	50	ENSMUST00000026076.14	ENSMUSG00000025089.16	Gfra1	chr19	protein_coding	glial cell line derived neurotrophic factor family receptor alpha 1
chr19	58227739;58246245	58246160;58252344	-	58227739	58252344	cassetteExon	0.5	100	100	ENSMUST00000026076.14	ENSMUSG00000025089.16	Gfra1	chr19	protein_coding	glial cell line derived neurotrophic factor family receptor alpha 1
chr19	58443026	58443306	-	58443026	58443630	A5SS	0.2	50	50	ENSMUST00000026076.14	ENSMUSG00000025089.16	Gfra1	chr19	protein_coding	glial cell line derived neurotrophic factor family receptor alpha 1
chr19	58443026	58443453	-	58443026	58443630	A5SS	0.2	50	50	ENSMUST00000026076.14	ENSMUSG00000025089.16	Gfra1	chr19	protein_coding	glial cell line derived neurotrophic factor family receptor alpha 1
chr19	58443026	58443679	-	58443026	58443630	A5SS	0.2	50	50	ENSMUST00000026076.14	ENSMUSG00000025089.16	Gfra1	chr19	protein_coding	glial cell line derived neurotrophic factor family receptor alpha 1
chr19	58443026	58443893	-	58443026	58443679	5pMXE	0.2	50	50	ENSMUST00000152507.8	ENSMUSG00000025089.16	Gfra1	chr19	protein_coding	glial cell line derived neurotrophic factor family receptor alpha 1
chr19	58443026	58443306	-	58443026	58443679	A5SS	0.2	50	50	ENSMUST00000152507.8	ENSMUSG00000025089.16	Gfra1	chr19	protein_coding	glial cell line derived neurotrophic factor family receptor alpha 1
chr19	58443026	58443453	-	58443026	58443679	A5SS	0.2	50	50	ENSMUST00000152507.8	ENSMUSG00000025089.16	Gfra1	chr19	protein_coding	glial cell line derived neurotrophic factor family receptor alpha 1
chr19	58443026	58443453	-	58443026	58443306	5pMXE	0.2	50	50	ENSMUST00000138530.8	ENSMUSG00000025089.16	Gfra1	chr19	protein_coding	glial cell line derived neurotrophic factor family receptor alpha 1
chr19	58443026	58443893	-	58443026	58443306	5pMXE	0.2	50	50	ENSMUST00000138530.8	ENSMUSG00000025089.16	Gfra1	chr19	protein_coding	glial cell line derived neurotrophic factor family receptor alpha 1
chr19	58443026	58443453	-	58443026	58443893	A5SS	0.2	50	50	ENSMUST00000131877.2	ENSMUSG00000025089.16	Gfra1	chr19	protein_coding	glial cell line derived neurotrophic factor family receptor alpha 1
chr19	58515869	58524993	+	58515869	58539856	A3SS	0.5	50	50	ENSMUST00000235305.2	ENSMUSG00000025090.10	Ccdc172	chr19	protein_coding	coiled-coil domain containing 172
chr19	58500497	58500743	+	58500458	58500743	A5SS	0.5	50	50	ENSMUST00000235305.2	ENSMUSG00000025090.10	Ccdc172	chr19	protein_coding	coiled-coil domain containing 172
chr19	58659016	58660135	+	58641302	58660135	A5SS	0.5	50	50	ENSMUST00000237451.2	ENSMUSG00000046008.9	Pnlip	chr19	protein_coding	pancreatic lipase
chr19	58687559	58688662	+	58687559	58688383	A3SS	0.5	50	50	ENSMUST00000189546.7	ENSMUSG00000101088.7	1810018F18Rik	chr19	transcribed_unprocessed_pseudogene	RIKEN cDNA 1810018F18 gene
chr19	58719032	58720550	+	58719032	58720456	A3SS	0.5	50	50	ENSMUST00000048644.6	ENSMUSG00000042179.7	Pnliprp1	chr19	protein_coding	pancreatic lipase related protein 1
chr19	58781228	58781429	-	58781228	58782813	A5SS	0.5	50	50	ENSMUST00000028299.11	ENSMUSG00000026931.11	1700019N19Rik	chr19	protein_coding	RIKEN cDNA 1700019N19 gene
chr19	58816770	58920322	-	58816770	58849279	5pMXE	0.33	50	50	ENSMUST00000066285.6	ENSMUSG00000025092.8	Hspa12a	chr19	protein_coding	heat shock protein 12A
chr19	58808809	58809432	-	58798053	58809432	A3SS	0.33	50	50	ENSMUST00000066285.6	ENSMUSG00000025092.8	Hspa12a	chr19	protein_coding	heat shock protein 12A
chr19	58816112	58848819	-	58816112	58816685	A5SS&ES	0.5	50	50	ENSMUST00000066285.6	ENSMUSG00000025092.8	Hspa12a	chr19	protein_coding	heat shock protein 12A
chr19	58816770	58834465	-	58816770	58849279	A5SS	0.33	50	50	ENSMUST00000066285.6	ENSMUSG00000025092.8	Hspa12a	chr19	protein_coding	heat shock protein 12A
chr19	58798053	58809432	-	58789348	58809432	A3SS	0.33	50	50	ENSMUST00000238055.2	ENSMUSG00000025092.8	Hspa12a	chr19	protein_coding	heat shock protein 12A
chr19	58808809	58809432	-	58789348	58809432	A3SS	0.33	50	50	ENSMUST00000238055.2	ENSMUSG00000025092.8	Hspa12a	chr19	protein_coding	heat shock protein 12A
chr19	58789348	58792898	-	58789348	58809432	A5SS	0.5	50	50	ENSMUST00000238055.2	ENSMUSG00000025092.8	Hspa12a	chr19	protein_coding	heat shock protein 12A
chr19	58915870	58920322	-	58816770	58920322	A3SS	0.33	50	50	ENSMUST00000237297.2	ENSMUSG00000025092.8	Hspa12a	chr19	protein_coding	heat shock protein 12A
chr19	58917394	58920322	-	58816770	58920322	A3SS	0.33	50	50	ENSMUST00000237297.2	ENSMUSG00000025092.8	Hspa12a	chr19	protein_coding	heat shock protein 12A
chr19	58816770	58834465	-	58816770	58920322	A5SS	0.33	50	50	ENSMUST00000237297.2	ENSMUSG00000025092.8	Hspa12a	chr19	protein_coding	heat shock protein 12A
chr19	58917394	58920322	-	58915870	58920322	A3SS	0.33	50	50	ENSMUST00000235791.2	ENSMUSG00000025092.8	Hspa12a	chr19	protein_coding	heat shock protein 12A
chr19	58932053	58933966	+	58932053	58933963	A3SS	0.5	50	50	ENSMUST00000054280.10	ENSMUSG00000048029.11	Eno4	chr19	protein_coding	enolase 4
chr19	58951339	58952871	+	58951339	58952810	A3SS	0.5	50	50	ENSMUST00000054280.10	ENSMUSG00000048029.11	Eno4	chr19	protein_coding	enolase 4
chr19	58957622	58959084	+	58957622	58959048	A3SS	0.5	50	50	ENSMUST00000054280.10	ENSMUSG00000048029.11	Eno4	chr19	protein_coding	enolase 4
chr19	58983570	58988325	-	58963640	58988325	A3SS	0.5	50	50	ENSMUST00000163821.3	ENSMUSG00000041362.18	Shtn1	chr19	protein_coding	shootin 1
chr19	58963640	58978621	-	58963640	58988325	A5SS	0.5	50	50	ENSMUST00000163821.3	ENSMUSG00000041362.18	Shtn1	chr19	protein_coding	shootin 1
chr19	59155206	59155340	-	59155206	59156903	A5SS	0.5	50	50	ENSMUST00000172821.4	ENSMUSG00000006270.8	Vax1	chr19	protein_coding	ventral anterior homeobox 1
chr19	59261372	59261599	+	59261372	59261647	A3SS	0.5	50	50	ENSMUST00000026084.5	ENSMUSG00000025094.9	Slc18a2	chr19	protein_coding	solute carrier family 18 (vesicular monoamine), member 2
chr19	59448056	59452312	+	59448056;59450278	59450094;59452312	ES	0.33	50	50	ENSMUST00000062216.4	ENSMUSG00000043969.5	Emx2	chr19	protein_coding	empty spiracles homeobox 2
chr19	59451319	59452312	+	59450278	59452312	A5SS	0.33	50	50	ENSMUST00000062216.4	ENSMUSG00000043969.5	Emx2	chr19	protein_coding	empty spiracles homeobox 2
chr19	59451319	59452312	+	59448056	59452312	A5SS	0.33	50	50	ENSMUST00000174353.2	ENSMUSG00000043969.5	Emx2	chr19	protein_coding	empty spiracles homeobox 2
chr19	59925862	59931080	-	59925862	59931942	A5SS	0.5	50	50	ENSMUST00000171986.8	ENSMUSG00000040022.15	Rab11fip2	chr19	protein_coding	RAB11 family interacting protein 2 (class I)
chr19	60141276;60144951	60144886;60148540	+	60141276	60148540	cassetteExon	0.5	100	100	ENSMUST00000065383.11	ENSMUSG00000053117.12	E330013P04Rik	chr19	lncRNA	RIKEN cDNA E330013P04 gene
chr19	60141276	60143182	+	60141276	60148540	A3SS	0.33	50	50	ENSMUST00000065383.11	ENSMUSG00000053117.12	E330013P04Rik	chr19	lncRNA	RIKEN cDNA E330013P04 gene
chr19	60141276	60144886	+	60141276	60143182	A3SS	0.33	50	50	ENSMUST00000190698.2	ENSMUSG00000053117.12	E330013P04Rik	chr19	lncRNA	RIKEN cDNA E330013P04 gene
chr19	60208792	60209486	-	60208792;60209009	60208922;60209486	ES	0.5	50	50	ENSMUST00000065286.2	ENSMUSG00000057858.9	Fam204a	chr19	protein_coding	family with sequence similarity 204, member A
chr19	60201194	60214742	-	60201194	60208472	A5SS&ES	0.5	50	50	ENSMUST00000065286.2	ENSMUSG00000057858.9	Fam204a	chr19	protein_coding	family with sequence similarity 204, member A
chr19	60209736	60213297	-	60209736	60214664	A5SS	0.33	50	50	ENSMUST00000065286.2	ENSMUSG00000057858.9	Fam204a	chr19	protein_coding	family with sequence similarity 204, member A
chr19	60209736	60215076	-	60209736	60214664	A5SS	0.33	50	50	ENSMUST00000065286.2	ENSMUSG00000057858.9	Fam204a	chr19	protein_coding	family with sequence similarity 204, member A
chr19	60209736;60213331	60213297;60215076	-	60209736	60215076	cassetteExon	0.5	100	100	ENSMUST00000238054.2	ENSMUSG00000057858.9	Fam204a	chr19	protein_coding	family with sequence similarity 204, member A
chr19	60522712	60531448	-	60522712;60525941	60525852;60531448	ES	0.33	50	50	ENSMUST00000081790.15	ENSMUSG00000033417.17	Cacul1	chr19	protein_coding	CDK2 associated, cullin domain 1
chr19	60517946;60522712	60522574;60531448	-	60517946	60531448	cassetteExon	0.5	100	100	ENSMUST00000111460.5	ENSMUSG00000033417.17	Cacul1	chr19	protein_coding	CDK2 associated, cullin domain 1
chr19	60525941	60531448	-	60517946	60531448	A3SS	0.33	50	50	ENSMUST00000111460.5	ENSMUSG00000033417.17	Cacul1	chr19	protein_coding	CDK2 associated, cullin domain 1
chr19	60522712	60531448	-	60522712	60525852	5pMXE	0.5	50	50	ENSMUST00000238073.2	ENSMUSG00000033417.17	Cacul1	chr19	protein_coding	CDK2 associated, cullin domain 1
chr19	60769955	60770323	-	60751702	60770323	A3SS	0.5	50	50	ENSMUST00000238125.2	ENSMUSG00000024991.9	Eif3a	chr19	protein_coding	eukaryotic translation initiation factor 3, subunit A
chr19	60751702	60752470	-	60751702	60770323	A5SS	0.5	50	50	ENSMUST00000238125.2	ENSMUSG00000024991.9	Eif3a	chr19	protein_coding	eukaryotic translation initiation factor 3, subunit A
chr19	60803246	60809645	+	60803246;60806048	60805969;60809645	ES	0.5	50	50	ENSMUST00000128357.8	ENSMUSG00000024993.16	Dennd10	chr19	protein_coding	DENN domain containing 10
chr19	60800111	60803050	+	60800111	60803030	A3SS	0.5	50	50	ENSMUST00000128357.8	ENSMUSG00000024993.16	Dennd10	chr19	protein_coding	DENN domain containing 10
chr19	60800580	60803030	+	60800111	60803030	A5SS	0.5	50	50	ENSMUST00000128357.8	ENSMUSG00000024993.16	Dennd10	chr19	protein_coding	DENN domain containing 10
chr19	60844290	60845648	-	60844290;60845565	60845371;60845648	ES	0.33	50	50	ENSMUST00000080806.10	ENSMUSG00000063698.10	Sfxn4	chr19	protein_coding	sideroflexin 4
chr19	60842498	60845648	-	60842498;60844290	60844265;60845648	ES	0.33	50	50	ENSMUST00000135808.8	ENSMUSG00000063698.10	Sfxn4	chr19	protein_coding	sideroflexin 4
chr19	60845565	60845648	-	60842498	60845648	A3SS	0.33	50	50	ENSMUST00000124921.2	ENSMUSG00000063698.10	Sfxn4	chr19	protein_coding	sideroflexin 4
chr19	61034592	61040015	+	61034592	61056986	A3SS	0.5	50	50	ENSMUST00000003313.10	ENSMUSG00000003228.10	Grk5	chr19	protein_coding	G protein-coupled receptor kinase 5
chr19	61105726	61115445	-	61046714	61115445	A3SS	0.25	50	50	ENSMUST00000122927.8	ENSMUSG00000074733.15	Zfp950	chr19	protein_coding	zinc finger protein 950
chr19	61106788	61115445	-	61046714	61115445	A3SS	0.25	50	50	ENSMUST00000122927.8	ENSMUSG00000074733.15	Zfp950	chr19	protein_coding	zinc finger protein 950
chr19	61108890	61115445	-	61046714	61115445	A3SS	0.25	50	50	ENSMUST00000122927.8	ENSMUSG00000074733.15	Zfp950	chr19	protein_coding	zinc finger protein 950
chr19	61105726	61115445	-	61105726;61106788	61106665;61115445	ES	0.33	50	50	ENSMUST00000127290.8	ENSMUSG00000074733.15	Zfp950	chr19	protein_coding	zinc finger protein 950
chr19	61105726;61106165	61106063;61106665	-	61105726	61106665	cassetteExon	0.5	100	100	ENSMUST00000127290.8	ENSMUSG00000074733.15	Zfp950	chr19	protein_coding	zinc finger protein 950
chr19	61108890	61115445	-	61106788	61115445	A3SS	0.33	50	50	ENSMUST00000127290.8	ENSMUSG00000074733.15	Zfp950	chr19	protein_coding	zinc finger protein 950
chr19	61108890	61115445	-	61105726	61115445	A3SS	0.25	50	50	ENSMUST00000205854.2	ENSMUSG00000074733.15	Zfp950	chr19	protein_coding	zinc finger protein 950
chr19	61105726	61106063	-	61105726	61115445	A5SS	0.33	50	50	ENSMUST00000205854.2	ENSMUSG00000074733.15	Zfp950	chr19	protein_coding	zinc finger protein 950
chr19	61215622	61216777	-	61215622;61215803	61215710;61216777	ES	0.5	50	50	ENSMUST00000076046.7	ENSMUSG00000059326.8	Csf2ra	chr19	protein_coding	colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)
chr19	61215622	61216777	-	61215622	61215710	5pMXE	0.5	50	50	ENSMUST00000237386.2	ENSMUSG00000059326.8	Csf2ra	chr19	protein_coding	colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)
chrX	6327914	6432847	+	6312315	6432847	A5SS	0.5	50	50	ENSMUST00000103005.10	ENSMUSG00000068270.16	Shroom4	chrX	protein_coding	shroom family member 4
chrX	6489650	6492883	+	6432998	6492883	A5SS	0.5	50	50	ENSMUST00000103005.10	ENSMUSG00000068270.16	Shroom4	chrX	protein_coding	shroom family member 4
chrX	6933895;6934594	6934419;6936670	+	6933895	6936670	cassetteExon	0.5	100	100	ENSMUST00000057101.13	ENSMUSG00000050089.14	Akap4	chrX	protein_coding	A kinase (PRKA) anchor protein 4
chrX	6933895	6936670	+	6934594	6936670	5pMXE	0.5	50	50	ENSMUST00000115751.3	ENSMUSG00000050089.14	Akap4	chrX	protein_coding	A kinase (PRKA) anchor protein 4
chrX	7052574	7079103	-	7052574	7054771	5pMXE	0.5	50	50	ENSMUST00000004428.14	ENSMUSG00000004317.15	Clcn5	chrX	protein_coding	chloride channel, voltage-sensitive 5
chrX	7183062	7185345	-	7183062;7184727	7184664;7185345	ES	0.5	50	50	ENSMUST00000115746.8	ENSMUSG00000004317.15	Clcn5	chrX	protein_coding	chloride channel, voltage-sensitive 5
chrX	7183062	7184623	-	7183062	7184664	A5SS	0.33	50	50	ENSMUST00000115746.8	ENSMUSG00000004317.15	Clcn5	chrX	protein_coding	chloride channel, voltage-sensitive 5
chrX	7183062;7184727	7184623;7185345	-	7183062	7185345	cassetteExon	0.5	100	100	ENSMUST00000128319.2	ENSMUSG00000004317.15	Clcn5	chrX	protein_coding	chloride channel, voltage-sensitive 5
chrX	7278771	7289118	-	7278771	7287167	5pMXE	0.25	50	50	ENSMUST00000154346.2	ENSMUSG00000063018.7	2010204K13Rik	chrX	lncRNA	RIKEN cDNA 2010204K13 gene
chrX	7278771	7290369	-	7278771	7287167	5pMXE	0.25	50	50	ENSMUST00000154346.2	ENSMUSG00000063018.7	2010204K13Rik	chrX	lncRNA	RIKEN cDNA 2010204K13 gene
chrX	7278771	7278924	-	7278771	7287167	A5SS	0.25	50	50	ENSMUST00000154346.2	ENSMUSG00000063018.7	2010204K13Rik	chrX	lncRNA	RIKEN cDNA 2010204K13 gene
chrX	7278771	7289118	-	7278771	7278924	5pMXE	0.25	50	50	ENSMUST00000147870.2	ENSMUSG00000063018.7	2010204K13Rik	chrX	lncRNA	RIKEN cDNA 2010204K13 gene
chrX	7278771	7290369	-	7278771	7278924	5pMXE	0.25	50	50	ENSMUST00000147870.2	ENSMUSG00000063018.7	2010204K13Rik	chrX	lncRNA	RIKEN cDNA 2010204K13 gene
chrX	7278771	7290369	-	7278771	7289118	5pMXE	0.25	50	50	ENSMUST00000128571.2	ENSMUSG00000063018.7	2010204K13Rik	chrX	lncRNA	RIKEN cDNA 2010204K13 gene
chrX	7430527	7460265	-	7430527	7439487	5pMXE	0.33	50	50	ENSMUST00000150787.8	ENSMUSG00000039556.17	Ppp1r3f	chrX	protein_coding	protein phosphatase 1, regulatory subunit 3F
chrX	7425884	7430101	-	7427125	7430101	A3SS	0.25	50	50	ENSMUST00000150787.8	ENSMUSG00000039556.17	Ppp1r3f	chrX	protein_coding	protein phosphatase 1, regulatory subunit 3F
chrX	7427122	7430101	-	7427125	7430101	A3SS	0.25	50	50	ENSMUST00000150787.8	ENSMUSG00000039556.17	Ppp1r3f	chrX	protein_coding	protein phosphatase 1, regulatory subunit 3F
chrX	7428821	7430101	-	7427125	7430101	A3SS	0.25	50	50	ENSMUST00000150787.8	ENSMUSG00000039556.17	Ppp1r3f	chrX	protein_coding	protein phosphatase 1, regulatory subunit 3F
chrX	7430527	7439043	-	7430527	7439487	A5SS	0.33	50	50	ENSMUST00000150787.8	ENSMUSG00000039556.17	Ppp1r3f	chrX	protein_coding	protein phosphatase 1, regulatory subunit 3F
chrX	7425884	7430101	-	7427122	7430101	A3SS	0.25	50	50	ENSMUST00000115742.9	ENSMUSG00000039556.17	Ppp1r3f	chrX	protein_coding	protein phosphatase 1, regulatory subunit 3F
chrX	7428821	7430101	-	7427122	7430101	A3SS	0.25	50	50	ENSMUST00000115742.9	ENSMUSG00000039556.17	Ppp1r3f	chrX	protein_coding	protein phosphatase 1, regulatory subunit 3F
chrX	7428821	7430101	-	7425884	7430101	A3SS	0.25	50	50	ENSMUST00000142447.8	ENSMUSG00000039556.17	Ppp1r3f	chrX	protein_coding	protein phosphatase 1, regulatory subunit 3F
chrX	7430527	7460265	-	7430527	7439043	5pMXE	0.33	50	50	ENSMUST00000132788.2	ENSMUSG00000039556.17	Ppp1r3f	chrX	protein_coding	protein phosphatase 1, regulatory subunit 3F
chrX	7440846	7443927	+	7440148	7443927	A5SS	0.5	50	50	ENSMUST00000144719.9	ENSMUSG00000039545.17	Flicr	chrX	lncRNA	Foxp3 regulating long intergenic noncoding RNA
chrX	7445964	7452573	+	7444320	7452573	A5SS	0.25	50	50	ENSMUST00000234896.2	ENSMUSG00000039521.14	Foxp3	chrX	protein_coding	forkhead box P3
chrX	7446085	7452573	+	7444320	7452573	A5SS	0.25	50	50	ENSMUST00000234896.2	ENSMUSG00000039521.14	Foxp3	chrX	protein_coding	forkhead box P3
chrX	7452133	7452573	+	7444320	7452573	A5SS	0.25	50	50	ENSMUST00000234896.2	ENSMUSG00000039521.14	Foxp3	chrX	protein_coding	forkhead box P3
chrX	7452800	7453514	+	7452800;7453417	7453313;7453514	ES	0.5	50	50	ENSMUST00000234363.2	ENSMUSG00000039521.14	Foxp3	chrX	protein_coding	forkhead box P3
chrX	7455194	7457612	+	7455194;7455415	7455335;7457612	ES	0.5	50	50	ENSMUST00000234363.2	ENSMUSG00000039521.14	Foxp3	chrX	protein_coding	forkhead box P3
chrX	7457765	7458889	+	7457765;7458474	7458398;7458889	ES	0.5	50	50	ENSMUST00000234363.2	ENSMUSG00000039521.14	Foxp3	chrX	protein_coding	forkhead box P3
chrX	7446085	7452573	+	7445964	7452573	A5SS	0.25	50	50	ENSMUST00000234363.2	ENSMUSG00000039521.14	Foxp3	chrX	protein_coding	forkhead box P3
chrX	7452133	7452573	+	7445964	7452573	A5SS	0.25	50	50	ENSMUST00000234363.2	ENSMUSG00000039521.14	Foxp3	chrX	protein_coding	forkhead box P3
chrX	7446085	7452573	+	7446085;7452133	7452051;7452573	ES	0.33	50	50	ENSMUST00000234479.2	ENSMUSG00000039521.14	Foxp3	chrX	protein_coding	forkhead box P3
chrX	7446085;7451876	7451810;7452051	+	7446085	7452051	cassetteExon	0.5	100	100	ENSMUST00000234479.2	ENSMUSG00000039521.14	Foxp3	chrX	protein_coding	forkhead box P3
chrX	7446817	7452051	+	7446085	7452051	A5SS	0.33	50	50	ENSMUST00000234479.2	ENSMUSG00000039521.14	Foxp3	chrX	protein_coding	forkhead box P3
chrX	7446085;7452133	7451810;7452573	+	7446085	7452573	cassetteExon	0.5	100	100	ENSMUST00000235116.2	ENSMUSG00000039521.14	Foxp3	chrX	protein_coding	forkhead box P3
chrX	7446817	7452051	+	7451876	7452051	A5SS&ES	0.33	50	50	ENSMUST00000115740.9	ENSMUSG00000039521.14	Foxp3	chrX	protein_coding	forkhead box P3
chrX	7493152	7494143	+	7493152;7493947	7493927;7494143	ES	0.33	50	50	ENSMUST00000155090.8	ENSMUSG00000031142.18	Cacna1f	chrX	protein_coding	calcium channel, voltage-dependent, alpha 1F subunit
chrX	7485010	7485207	+	7485010	7485552	A3SS	0.5	50	50	ENSMUST00000155090.8	ENSMUSG00000031142.18	Cacna1f	chrX	protein_coding	calcium channel, voltage-dependent, alpha 1F subunit
chrX	7480226	7480455	+	7480192	7480455	A5SS	0.5	50	50	ENSMUST00000155090.8	ENSMUSG00000031142.18	Cacna1f	chrX	protein_coding	calcium channel, voltage-dependent, alpha 1F subunit
chrX	7493615	7493927	+	7493152	7493927	A5SS	0.5	50	50	ENSMUST00000155090.8	ENSMUSG00000031142.18	Cacna1f	chrX	protein_coding	calcium channel, voltage-dependent, alpha 1F subunit
chrX	7493615	7494143	+	7493947	7494143	A5SS&ES	0.33	50	50	ENSMUST00000155090.8	ENSMUSG00000031142.18	Cacna1f	chrX	protein_coding	calcium channel, voltage-dependent, alpha 1F subunit
chrX	7493615	7494143	+	7493152	7494143	A5SS	0.33	50	50	ENSMUST00000115725.9	ENSMUSG00000031142.18	Cacna1f	chrX	protein_coding	calcium channel, voltage-dependent, alpha 1F subunit
chrX	7493152	7494143	+	7493152	7493927	A3SS	0.5	50	50	ENSMUST00000123979.2	ENSMUSG00000031142.18	Cacna1f	chrX	protein_coding	calcium channel, voltage-dependent, alpha 1F subunit
chrX	7493615	7494143	+	7493615;7493947	7493927;7494143	ES	0.5	50	50	ENSMUST00000128628.8	ENSMUSG00000031142.18	Cacna1f	chrX	protein_coding	calcium channel, voltage-dependent, alpha 1F subunit
chrX	7505069	7506097	+	7504967	7506097	A5SS	0.33	50	50	ENSMUST00000069520.11	ENSMUSG00000031144.16	Syp	chrX	protein_coding	synaptophysin
chrX	7505602	7506097	+	7504967	7506097	A5SS	0.33	50	50	ENSMUST00000069520.11	ENSMUSG00000031144.16	Syp	chrX	protein_coding	synaptophysin
chrX	7505602	7506097	+	7505069	7506097	A5SS	0.33	50	50	ENSMUST00000128890.2	ENSMUSG00000031144.16	Syp	chrX	protein_coding	synaptophysin
chrX	7546285	7547189	-	7546285	7547385	A5SS	0.5	50	50	ENSMUST00000130287.2	ENSMUSG00000031147.9	Magix	chrX	protein_coding	MAGI family member, X-linked
chrX	7571611	7572250	+	7571671	7572250	A5SS	0.5	50	50	ENSMUST00000049896.13	ENSMUSG00000031148.15	Gpkow	chrX	protein_coding	G patch domain and KOW motifs
chrX	7590337	7592170	+	7590337;7590530	7590426;7592170	ES	0.5	50	50	ENSMUST00000156000.8	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530	7592437	+	7590530;7592275	7592170;7592437	ES	0.33	50	50	ENSMUST00000156000.8	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530	7591979	+	7590530	7592170	A3SS	0.16	50	50	ENSMUST00000156000.8	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530	7592097	+	7590530	7592170	A3SS	0.16	50	50	ENSMUST00000156000.8	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530	7592117	+	7590530	7592170	A3SS	0.16	50	50	ENSMUST00000156000.8	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530	7592488	+	7590530	7592170	A3SS&ES	0.16	50	50	ENSMUST00000156000.8	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7592275	7592488	+	7592275	7592437	A3SS	0.5	50	50	ENSMUST00000156000.8	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7588515	7590088	+	7588469	7590088	A5SS	0.11	50	50	ENSMUST00000156000.8	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7588578	7590088	+	7588469	7590088	A5SS	0.11	50	50	ENSMUST00000156000.8	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7588578	7590263	+	7590159	7590263	A5SS&ES	0.5	50	50	ENSMUST00000156000.8	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7588617	7590088	+	7588469	7590088	A5SS	0.11	50	50	ENSMUST00000156000.8	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7588621	7590088	+	7588469	7590088	A5SS	0.11	50	50	ENSMUST00000156000.8	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7589002	7590088	+	7588469	7590088	A5SS	0.11	50	50	ENSMUST00000156000.8	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7589220	7590088	+	7588469	7590088	A5SS	0.11	50	50	ENSMUST00000156000.8	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7589596	7590088	+	7588469	7590088	A5SS	0.11	50	50	ENSMUST00000156000.8	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7589992	7590088	+	7588469	7590088	A5SS	0.11	50	50	ENSMUST00000156000.8	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530	7592437	+	7590530;7592275	7592117;7592437	ES	0.33	50	50	ENSMUST00000208553.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7593004	7593207	+	7593004	7593117	3pMXE	0.5	50	50	ENSMUST00000208553.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7592531;7592722	7592649;7592925	+	7592531	7592925	cassetteExon	0.5	100	100	ENSMUST00000208553.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590337	7592170	+	7590337	7590426	A3SS&ES	0.25	50	50	ENSMUST00000208553.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530	7591979	+	7590530	7592117	A3SS	0.14	50	50	ENSMUST00000208553.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530	7592097	+	7590530	7592117	A3SS	0.14	50	50	ENSMUST00000208553.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530	7592488	+	7590530	7592117	A3SS&ES	0.14	50	50	ENSMUST00000208553.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7588617	7590092	+	7588436	7590092	A5SS	0.33	50	50	ENSMUST00000208553.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7589992	7590092	+	7588436	7590092	A5SS	0.33	50	50	ENSMUST00000208553.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7592555	7592925	+	7592531	7592925	A5SS	0.2	50	50	ENSMUST00000208553.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7593510	7593989	+	7593510;7593731	7593586;7593989	ES	0.5	50	50	ENSMUST00000043045.10	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7593731	7595955	+	7593731	7593989	3pMXE	0.5	50	50	ENSMUST00000043045.10	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7588617;7589596	7589554;7590088	+	7588617	7590088	cassetteExon	0.5	100	100	ENSMUST00000043045.10	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7588617;7589992	7589554;7590088	+	7588617	7590088	cassetteExon	0.5	100	100	ENSMUST00000043045.10	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7588617;7589992	7589804;7590088	+	7588617	7590088	cassetteExon	0.5	100	100	ENSMUST00000043045.10	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7588617	7590092	+	7588617	7590088	A3SS	0.25	50	50	ENSMUST00000043045.10	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7593325	7593421	+	7593325	7593409	A3SS	0.33	50	50	ENSMUST00000043045.10	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7593325	7593451	+	7593325	7593409	A3SS	0.33	50	50	ENSMUST00000043045.10	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7588515	7590088	+	7588617	7590088	A5SS	0.11	50	50	ENSMUST00000043045.10	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7588578	7590088	+	7588617	7590088	A5SS	0.11	50	50	ENSMUST00000043045.10	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7588621	7590088	+	7588617	7590088	A5SS	0.11	50	50	ENSMUST00000043045.10	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7589002	7590088	+	7588617	7590088	A5SS	0.11	50	50	ENSMUST00000043045.10	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7589220	7590088	+	7588617	7590088	A5SS	0.11	50	50	ENSMUST00000043045.10	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7593510	7593989	+	7593510	7593586	3pMXE	0.33	50	50	ENSMUST00000207386.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7593510	7595955	+	7593510	7593586	3pMXE	0.33	50	50	ENSMUST00000207386.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590337;7590530	7590426;7592925	+	7590337	7592925	cassetteExon	0.5	100	100	ENSMUST00000207386.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590337;7592531	7592170;7592925	+	7590337	7592925	cassetteExon	0.5	100	100	ENSMUST00000207386.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590337;7592555	7592170;7592925	+	7590337	7592925	cassetteExon	0.5	100	100	ENSMUST00000207386.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590337;7592531	7592437;7592925	+	7590337	7592925	cassetteExon	0.5	100	100	ENSMUST00000207386.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590337;7592555	7592437;7592925	+	7590337	7592925	cassetteExon	0.5	100	100	ENSMUST00000207386.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590337;7592722	7592437;7592925	+	7590337	7592925	cassetteExon	0.5	100	100	ENSMUST00000207386.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590337	7592437	+	7590337;7592275	7592170;7592437	ES	0.33	50	50	ENSMUST00000116634.9	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590337;7590530	7590426;7592437	+	7590337;7592275	7592170;7592437	MXE	0.5	100	100	ENSMUST00000116634.9	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590337;7590530	7590426;7592925	+	7590337;7592531	7592170;7592925	MXE	0.5	100	100	ENSMUST00000116634.9	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7588515	7590088	+	7588621	7590088	A5SS	0.11	50	50	ENSMUST00000208072.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7588578	7590088	+	7588621	7590088	A5SS	0.11	50	50	ENSMUST00000208072.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7589002	7590088	+	7588621	7590088	A5SS	0.11	50	50	ENSMUST00000208072.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7589220	7590088	+	7588621	7590088	A5SS	0.11	50	50	ENSMUST00000208072.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7589596	7590088	+	7588621	7590088	A5SS	0.11	50	50	ENSMUST00000208072.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7589992	7590088	+	7588621	7590088	A5SS	0.11	50	50	ENSMUST00000208072.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7588578	7590263	+	7588578;7590159	7590088;7590263	ES	0.5	50	50	ENSMUST00000207589.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7588515	7590088	+	7588578	7590088	A5SS	0.11	50	50	ENSMUST00000207589.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7589002	7590088	+	7588578	7590088	A5SS	0.11	50	50	ENSMUST00000207589.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7589220	7590088	+	7588578	7590088	A5SS	0.11	50	50	ENSMUST00000207589.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7589596	7590088	+	7588578	7590088	A5SS	0.11	50	50	ENSMUST00000207589.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7589992	7590088	+	7588578	7590088	A5SS	0.11	50	50	ENSMUST00000207589.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590337;7590530	7590426;7592437	+	7590337	7592437	cassetteExon	0.5	100	100	ENSMUST00000208524.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590337;7590530	7590426;7592925	+	7590337;7592531	7592437;7592925	MXE	0.5	100	100	ENSMUST00000208524.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7593325	7593451	+	7593325	7593421	A3SS	0.33	50	50	ENSMUST00000208618.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590337	7592437	+	7590337	7590426	3pMXE	0.25	50	50	ENSMUST00000207183.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590337	7592925	+	7590337	7590426	3pMXE	0.25	50	50	ENSMUST00000207183.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590337;7592555	7592170;7592925	+	7590337;7590530	7590426;7592925	MXE	0.5	100	100	ENSMUST00000208443.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590337;7592555	7592437;7592925	+	7590337;7590530	7590426;7592925	MXE	0.5	100	100	ENSMUST00000208443.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590337;7592722	7592437;7592925	+	7590337;7590530	7590426;7592925	MXE	0.5	100	100	ENSMUST00000208443.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530;7592531	7592097;7592925	+	7590530	7592925	cassetteExon	0.5	100	100	ENSMUST00000208443.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530;7592555	7592097;7592925	+	7590530	7592925	cassetteExon	0.5	100	100	ENSMUST00000208443.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530;7592531	7592117;7592925	+	7590530	7592925	cassetteExon	0.5	100	100	ENSMUST00000208443.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530;7592555	7592117;7592925	+	7590530	7592925	cassetteExon	0.5	100	100	ENSMUST00000208443.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530;7592531	7592170;7592925	+	7590530	7592925	cassetteExon	0.5	100	100	ENSMUST00000208443.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530;7592555	7592170;7592925	+	7590530	7592925	cassetteExon	0.5	100	100	ENSMUST00000208443.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530;7592531	7592437;7592925	+	7590530	7592925	cassetteExon	0.5	100	100	ENSMUST00000208443.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530;7592555	7592437;7592925	+	7590530	7592925	cassetteExon	0.5	100	100	ENSMUST00000208443.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530;7592722	7592437;7592925	+	7590530	7592925	cassetteExon	0.5	100	100	ENSMUST00000208443.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530;7592531	7592488;7592925	+	7590530	7592925	cassetteExon	0.5	100	100	ENSMUST00000208443.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530;7592555	7592488;7592925	+	7590530	7592925	cassetteExon	0.5	100	100	ENSMUST00000208443.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530;7592722	7592488;7592925	+	7590530	7592925	cassetteExon	0.5	100	100	ENSMUST00000208443.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530	7591979	+	7590530	7592925	A3SS	0.14	50	50	ENSMUST00000208443.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530;7592275	7591979;7592437	+	7590530	7592437	cassetteExon	0.5	100	100	ENSMUST00000209144.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530;7592275	7592097;7592437	+	7590530	7592437	cassetteExon	0.5	100	100	ENSMUST00000209144.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530	7592488	+	7590530	7592437	A3SS	0.14	50	50	ENSMUST00000209144.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7588617;7589992	7589554;7590092	+	7588617	7590092	cassetteExon	0.5	100	100	ENSMUST00000115689.10	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7588617;7589992	7589804;7590092	+	7588617	7590092	cassetteExon	0.5	100	100	ENSMUST00000115689.10	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7588617;7589596	7589554;7590088	+	7588617;7589992	7589804;7590088	MXE	0.5	100	100	ENSMUST00000131077.9	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7588617;7589603	7589554;7589804	+	7588617	7589804	cassetteExon	0.5	100	100	ENSMUST00000131077.9	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7588617	7590092	+	7588617	7589804	A3SS&ES	0.25	50	50	ENSMUST00000131077.9	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7589992	7590092	+	7589992	7590088	A3SS	0.5	50	50	ENSMUST00000131077.9	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7588515	7590088	+	7589992	7590088	A5SS&ES	0.12	50	50	ENSMUST00000131077.9	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7589002	7590088	+	7589992	7590088	A5SS&ES	0.12	50	50	ENSMUST00000131077.9	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7589220	7590088	+	7589992	7590088	A5SS&ES	0.12	50	50	ENSMUST00000131077.9	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530	7592488	+	7590530;7592275	7592170;7592488	ES	0.5	50	50	ENSMUST00000116633.9	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530	7592437	+	7590530	7592170	A3SS&ES	0.14	50	50	ENSMUST00000116633.9	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7589002	7590088	+	7588515	7590088	A5SS	0.11	50	50	ENSMUST00000208996.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7589220	7590088	+	7588515	7590088	A5SS	0.11	50	50	ENSMUST00000208996.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7589596	7590088	+	7588515	7590088	A5SS	0.11	50	50	ENSMUST00000208996.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7592722	7592925	+	7592555	7592925	A5SS	0.2	50	50	ENSMUST00000208996.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530	7591979	+	7590530	7592097	A3SS	0.14	50	50	ENSMUST00000209143.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530	7592488	+	7590530	7592097	A3SS&ES	0.14	50	50	ENSMUST00000209143.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530	7592925	+	7590530	7592170	3pMXE	0.14	50	50	ENSMUST00000144148.4	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7588617	7590092	+	7588617	7589554	A3SS&ES	0.25	50	50	ENSMUST00000144148.4	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7589596	7590088	+	7589992	7590088	A5SS&ES	0.14	50	50	ENSMUST00000144148.4	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7588617	7589804	+	7588617	7589554	A3SS	0.25	50	50	ENSMUST00000125991.9	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530	7592488	+	7590530	7591979	A3SS&ES	0.16	50	50	ENSMUST00000154253.8	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7589002	7590088	+	7589596	7590088	A5SS&ES	0.16	50	50	ENSMUST00000148624.8	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7589220	7590088	+	7589596	7590088	A5SS&ES	0.16	50	50	ENSMUST00000148624.8	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530	7592925	+	7590530	7592488	3pMXE	0.14	50	50	ENSMUST00000127847.8	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590337;7592275	7592170;7592488	+	7590337;7590530	7590426;7592488	MXE	0.5	100	100	ENSMUST00000127847.8	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530;7592275	7591979;7592488	+	7590530	7592488	cassetteExon	0.5	100	100	ENSMUST00000127847.8	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530;7592275	7592097;7592488	+	7590530	7592488	cassetteExon	0.5	100	100	ENSMUST00000127847.8	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530;7592275	7592117;7592488	+	7590530	7592488	cassetteExon	0.5	100	100	ENSMUST00000127847.8	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7589220	7590088	+	7589002	7590088	A5SS	0.11	50	50	ENSMUST00000127847.8	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7588617	7590092	+	7589992	7590092	5pMXE	0.33	50	50	ENSMUST00000155914.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530	7592437	+	7590530	7591979	3pMXE	0.14	50	50	ENSMUST00000155914.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590337	7592170	+	7590530	7592170	5pMXE	0.5	50	50	ENSMUST00000207109.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590337	7592437	+	7592275	7592437	5pMXE	0.33	50	50	ENSMUST00000208918.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7590530	7592437	+	7592275	7592437	5pMXE	0.33	50	50	ENSMUST00000208918.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7593510	7595955	+	7593510	7593989	3pMXE	0.33	50	50	ENSMUST00000208719.2	ENSMUSG00000039382.13	Wdr45	chrX	protein_coding	WD repeat domain 45
chrX	7593510;7593731	7593586;7595955	+	7593510	7595955	cassetteExon	0.5	100	100	ENSMUST00000208156.2	ENSMUSG00000109493.2	Gm45208	chrX	protein_coding	predicted gene 45208
chrX	7595001	7595955	+	7593510	7595955	A5SS	0.33	50	50	ENSMUST00000208156.2	ENSMUSG00000109493.2	Gm45208	chrX	protein_coding	predicted gene 45208
chrX	7595001	7595955	+	7593731	7595955	A5SS	0.33	50	50	ENSMUST00000207461.2	ENSMUSG00000109493.2	Gm45208	chrX	protein_coding	predicted gene 45208
chrX	7604762	7616837	-	7604762	7607451	5pMXE	0.16	50	50	ENSMUST00000033490.13	ENSMUSG00000031150.14	Ccdc120	chrX	protein_coding	coiled-coil domain containing 120
chrX	7604762;7606644	7606367;7607451	-	7604762	7607451	cassetteExon	0.5	100	100	ENSMUST00000033490.13	ENSMUSG00000031150.14	Ccdc120	chrX	protein_coding	coiled-coil domain containing 120
chrX	7604762;7606644	7606382;7607451	-	7604762	7607451	cassetteExon	0.5	100	100	ENSMUST00000033490.13	ENSMUSG00000031150.14	Ccdc120	chrX	protein_coding	coiled-coil domain containing 120
chrX	7604762;7606644	7606394;7607451	-	7604762	7607451	cassetteExon	0.5	100	100	ENSMUST00000033490.13	ENSMUSG00000031150.14	Ccdc120	chrX	protein_coding	coiled-coil domain containing 120
chrX	7604762;7606644	7606588;7607451	-	7604762	7607451	cassetteExon	0.5	100	100	ENSMUST00000033490.13	ENSMUSG00000031150.14	Ccdc120	chrX	protein_coding	coiled-coil domain containing 120
chrX	7604762;7606648	7606367;7607451	-	7604762	7607451	cassetteExon	0.5	100	100	ENSMUST00000033490.13	ENSMUSG00000031150.14	Ccdc120	chrX	protein_coding	coiled-coil domain containing 120
chrX	7604762;7606648	7606382;7607451	-	7604762	7607451	cassetteExon	0.5	100	100	ENSMUST00000033490.13	ENSMUSG00000031150.14	Ccdc120	chrX	protein_coding	coiled-coil domain containing 120
chrX	7604762;7606648	7606394;7607451	-	7604762	7607451	cassetteExon	0.5	100	100	ENSMUST00000033490.13	ENSMUSG00000031150.14	Ccdc120	chrX	protein_coding	coiled-coil domain containing 120
chrX	7604762;7606648	7606588;7607451	-	7604762	7607451	cassetteExon	0.5	100	100	ENSMUST00000033490.13	ENSMUSG00000031150.14	Ccdc120	chrX	protein_coding	coiled-coil domain containing 120
chrX	7604762	7606588	-	7604762	7606367	5pMXE	0.16	50	50	ENSMUST00000128289.8	ENSMUSG00000031150.14	Ccdc120	chrX	protein_coding	coiled-coil domain containing 120
chrX	7604762	7607451	-	7604762	7606367	5pMXE	0.16	50	50	ENSMUST00000128289.8	ENSMUSG00000031150.14	Ccdc120	chrX	protein_coding	coiled-coil domain containing 120
chrX	7604762	7616837	-	7604762	7606367	5pMXE	0.16	50	50	ENSMUST00000128289.8	ENSMUSG00000031150.14	Ccdc120	chrX	protein_coding	coiled-coil domain containing 120
chrX	7604762	7606382	-	7604762	7606367	A5SS	0.16	50	50	ENSMUST00000128289.8	ENSMUSG00000031150.14	Ccdc120	chrX	protein_coding	coiled-coil domain containing 120
chrX	7604762	7606394	-	7604762	7606367	A5SS	0.16	50	50	ENSMUST00000128289.8	ENSMUSG00000031150.14	Ccdc120	chrX	protein_coding	coiled-coil domain containing 120
chrX	7606644	7616837	-	7606644	7607451	5pMXE	0.5	50	50	ENSMUST00000153925.8	ENSMUSG00000031150.14	Ccdc120	chrX	protein_coding	coiled-coil domain containing 120
chrX	7606648	7607451	-	7606644	7607451	A3SS	0.33	50	50	ENSMUST00000153925.8	ENSMUSG00000031150.14	Ccdc120	chrX	protein_coding	coiled-coil domain containing 120
chrX	7604762	7606382	-	7604762	7606588	A5SS	0.2	50	50	ENSMUST00000153925.8	ENSMUSG00000031150.14	Ccdc120	chrX	protein_coding	coiled-coil domain containing 120
chrX	7604762	7606394	-	7604762	7606588	A5SS	0.2	50	50	ENSMUST00000153925.8	ENSMUSG00000031150.14	Ccdc120	chrX	protein_coding	coiled-coil domain containing 120
chrX	7604762	7607451	-	7604762	7606382	5pMXE	0.16	50	50	ENSMUST00000128011.8	ENSMUSG00000031150.14	Ccdc120	chrX	protein_coding	coiled-coil domain containing 120
chrX	7604762	7616837	-	7604762	7606382	5pMXE	0.16	50	50	ENSMUST00000128011.8	ENSMUSG00000031150.14	Ccdc120	chrX	protein_coding	coiled-coil domain containing 120
chrX	7604762	7606394	-	7604762	7606382	A5SS	0.16	50	50	ENSMUST00000128011.8	ENSMUSG00000031150.14	Ccdc120	chrX	protein_coding	coiled-coil domain containing 120
chrX	7604762	7607451	-	7604762	7606394	5pMXE	0.16	50	50	ENSMUST00000156787.2	ENSMUSG00000031150.14	Ccdc120	chrX	protein_coding	coiled-coil domain containing 120
chrX	7604762	7616837	-	7604762	7606394	5pMXE	0.16	50	50	ENSMUST00000156787.2	ENSMUSG00000031150.14	Ccdc120	chrX	protein_coding	coiled-coil domain containing 120
chrX	7604762;7606644	7606367;7616837	-	7604762	7616837	cassetteExon	0.5	100	100	ENSMUST00000154977.2	ENSMUSG00000031150.14	Ccdc120	chrX	protein_coding	coiled-coil domain containing 120
chrX	7604762;7606644	7606382;7616837	-	7604762	7616837	cassetteExon	0.5	100	100	ENSMUST00000154977.2	ENSMUSG00000031150.14	Ccdc120	chrX	protein_coding	coiled-coil domain containing 120
chrX	7604762;7606644	7606394;7616837	-	7604762	7616837	cassetteExon	0.5	100	100	ENSMUST00000154977.2	ENSMUSG00000031150.14	Ccdc120	chrX	protein_coding	coiled-coil domain containing 120
chrX	7604762;7606644	7606588;7616837	-	7604762	7616837	cassetteExon	0.5	100	100	ENSMUST00000154977.2	ENSMUSG00000031150.14	Ccdc120	chrX	protein_coding	coiled-coil domain containing 120
chrX	7604762	7607451	-	7604762	7606588	A5SS&ES	0.16	50	50	ENSMUST00000139499.2	ENSMUSG00000031150.14	Ccdc120	chrX	protein_coding	coiled-coil domain containing 120
chrX	7629299	7631746	+	7628869	7631746	A5SS	0.16	50	50	ENSMUST00000144715.2	ENSMUSG00000000134.18	Tfe3	chrX	protein_coding	transcription factor E3
chrX	7629452	7631746	+	7628869	7631746	A5SS	0.16	50	50	ENSMUST00000144715.2	ENSMUSG00000000134.18	Tfe3	chrX	protein_coding	transcription factor E3
chrX	7630237	7631746	+	7628869	7631746	A5SS	0.16	50	50	ENSMUST00000144715.2	ENSMUSG00000000134.18	Tfe3	chrX	protein_coding	transcription factor E3
chrX	7630267	7631746	+	7628869	7631746	A5SS	0.16	50	50	ENSMUST00000144715.2	ENSMUSG00000000134.18	Tfe3	chrX	protein_coding	transcription factor E3
chrX	7630399	7631746	+	7628869	7631746	A5SS	0.16	50	50	ENSMUST00000144715.2	ENSMUSG00000000134.18	Tfe3	chrX	protein_coding	transcription factor E3
chrX	7631859	7632813	+	7631859	7632794	A3SS	0.33	50	50	ENSMUST00000132209.8	ENSMUSG00000000134.18	Tfe3	chrX	protein_coding	transcription factor E3
chrX	7631859	7632859	+	7631859	7632794	A3SS	0.33	50	50	ENSMUST00000132209.8	ENSMUSG00000000134.18	Tfe3	chrX	protein_coding	transcription factor E3
chrX	7630331	7632794	+	7631859	7632794	A5SS&ES	0.5	50	50	ENSMUST00000132209.8	ENSMUSG00000000134.18	Tfe3	chrX	protein_coding	transcription factor E3
chrX	7633923	7635669	+	7633923;7634236	7634132;7635669	ES	0.5	50	50	ENSMUST00000077680.10	ENSMUSG00000000134.18	Tfe3	chrX	protein_coding	transcription factor E3
chrX	7629452	7631746	+	7629299	7631746	A5SS	0.16	50	50	ENSMUST00000077680.10	ENSMUSG00000000134.18	Tfe3	chrX	protein_coding	transcription factor E3
chrX	7630237	7631746	+	7629299	7631746	A5SS	0.16	50	50	ENSMUST00000077680.10	ENSMUSG00000000134.18	Tfe3	chrX	protein_coding	transcription factor E3
chrX	7630267	7631746	+	7629299	7631746	A5SS	0.16	50	50	ENSMUST00000077680.10	ENSMUSG00000000134.18	Tfe3	chrX	protein_coding	transcription factor E3
chrX	7630399	7631746	+	7629299	7631746	A5SS	0.16	50	50	ENSMUST00000077680.10	ENSMUSG00000000134.18	Tfe3	chrX	protein_coding	transcription factor E3
chrX	7631859	7632859	+	7631859	7632813	A3SS	0.33	50	50	ENSMUST00000115679.8	ENSMUSG00000000134.18	Tfe3	chrX	protein_coding	transcription factor E3
chrX	7630237	7631746	+	7629452	7631746	A5SS	0.16	50	50	ENSMUST00000137467.8	ENSMUSG00000000134.18	Tfe3	chrX	protein_coding	transcription factor E3
chrX	7630267	7631746	+	7629452	7631746	A5SS	0.16	50	50	ENSMUST00000137467.8	ENSMUSG00000000134.18	Tfe3	chrX	protein_coding	transcription factor E3
chrX	7630399	7631746	+	7629452	7631746	A5SS	0.16	50	50	ENSMUST00000137467.8	ENSMUSG00000000134.18	Tfe3	chrX	protein_coding	transcription factor E3
chrX	7630267	7631746	+	7630237	7631746	A5SS	0.16	50	50	ENSMUST00000144900.2	ENSMUSG00000000134.18	Tfe3	chrX	protein_coding	transcription factor E3
chrX	7630399	7631746	+	7630237	7631746	A5SS	0.16	50	50	ENSMUST00000144900.2	ENSMUSG00000000134.18	Tfe3	chrX	protein_coding	transcription factor E3
chrX	7630399	7631746	+	7630267	7631746	A5SS	0.16	50	50	ENSMUST00000115677.8	ENSMUSG00000000134.18	Tfe3	chrX	protein_coding	transcription factor E3
chrX	7666580	7667416	+	7666580;7666822	7666775;7667416	ES	0.5	50	50	ENSMUST00000065932.14	ENSMUSG00000031153.17	Gripap1	chrX	protein_coding	GRIP1 associated protein 1
chrX	7669639;7669925	7669833;7670599	+	7669639	7670599	cassetteExon	0.5	100	100	ENSMUST00000065932.14	ENSMUSG00000031153.17	Gripap1	chrX	protein_coding	GRIP1 associated protein 1
chrX	7658576	7660499	+	7658576	7665529	A3SS	0.5	50	50	ENSMUST00000136930.8	ENSMUSG00000031153.17	Gripap1	chrX	protein_coding	GRIP1 associated protein 1
chrX	7661338	7665529	+	7658576	7665529	A5SS	0.5	50	50	ENSMUST00000136930.8	ENSMUSG00000031153.17	Gripap1	chrX	protein_coding	GRIP1 associated protein 1
chrX	7740192	7740469	+	7740192	7740472	A3SS	0.5	50	50	ENSMUST00000033494.16	ENSMUSG00000031154.16	Otud5	chrX	protein_coding	OTU domain containing 5
chrX	7734077	7734162	+	7734062	7734162	A5SS	0.5	50	50	ENSMUST00000033494.16	ENSMUSG00000031154.16	Otud5	chrX	protein_coding	OTU domain containing 5
chrX	7738420	7739793	+	7738438	7739793	A5SS	0.5	50	50	ENSMUST00000033494.16	ENSMUSG00000031154.16	Otud5	chrX	protein_coding	OTU domain containing 5
chrX	7750672	7755851	+	7750672;7752170	7751988;7755851	ES	0.33	50	50	ENSMUST00000115660.12	ENSMUSG00000031156.19	Slc35a2	chrX	protein_coding	solute carrier family 35 (UDP-galactose transporter), member A2
chrX	7752170	7755886	+	7752170	7755851	A3SS	0.5	50	50	ENSMUST00000115660.12	ENSMUSG00000031156.19	Slc35a2	chrX	protein_coding	solute carrier family 35 (UDP-galactose transporter), member A2
chrX	7756002	7758969	+	7756002	7758379	A3SS	0.33	50	50	ENSMUST00000115660.12	ENSMUSG00000031156.19	Slc35a2	chrX	protein_coding	solute carrier family 35 (UDP-galactose transporter), member A2
chrX	7756002	7760430	+	7756002	7758379	A3SS	0.33	50	50	ENSMUST00000115660.12	ENSMUSG00000031156.19	Slc35a2	chrX	protein_coding	solute carrier family 35 (UDP-galactose transporter), member A2
chrX	7750747	7751988	+	7750672	7751988	A5SS	0.5	50	50	ENSMUST00000115660.12	ENSMUSG00000031156.19	Slc35a2	chrX	protein_coding	solute carrier family 35 (UDP-galactose transporter), member A2
chrX	7752131	7755851	+	7752170	7755851	A5SS	0.33	50	50	ENSMUST00000115660.12	ENSMUSG00000031156.19	Slc35a2	chrX	protein_coding	solute carrier family 35 (UDP-galactose transporter), member A2
chrX	7756002	7760430	+	7756002;7759106	7758379;7760430	ES	0.33	50	50	ENSMUST00000115663.10	ENSMUSG00000031156.19	Slc35a2	chrX	protein_coding	solute carrier family 35 (UDP-galactose transporter), member A2
chrX	7759106	7760207	+	7759106	7760430	A3SS	0.5	50	50	ENSMUST00000115663.10	ENSMUSG00000031156.19	Slc35a2	chrX	protein_coding	solute carrier family 35 (UDP-galactose transporter), member A2
chrX	7759654	7760430	+	7759106	7760430	A5SS	0.33	50	50	ENSMUST00000115663.10	ENSMUSG00000031156.19	Slc35a2	chrX	protein_coding	solute carrier family 35 (UDP-galactose transporter), member A2
chrX	7756002	7760430	+	7756002	7758969	3pMXE	0.33	50	50	ENSMUST00000096514.11	ENSMUSG00000031156.19	Slc35a2	chrX	protein_coding	solute carrier family 35 (UDP-galactose transporter), member A2
chrX	7756002	7760430	+	7756002;7759654	7758379;7760430	ES	0.33	50	50	ENSMUST00000155967.3	ENSMUSG00000031156.19	Slc35a2	chrX	protein_coding	solute carrier family 35 (UDP-galactose transporter), member A2
chrX	7750672	7755851	+	7750672	7751988	A3SS&ES	0.5	50	50	ENSMUST00000208640.2	ENSMUSG00000031156.19	Slc35a2	chrX	protein_coding	solute carrier family 35 (UDP-galactose transporter), member A2
chrX	7750672	7755851	+	7750672;7752131	7751988;7755851	ES	0.33	50	50	ENSMUST00000207114.2	ENSMUSG00000031156.19	Slc35a2	chrX	protein_coding	solute carrier family 35 (UDP-galactose transporter), member A2
chrX	7750672	7755851	+	7752170	7755851	A5SS&ES	0.33	50	50	ENSMUST00000208633.2	ENSMUSG00000031156.19	Slc35a2	chrX	protein_coding	solute carrier family 35 (UDP-galactose transporter), member A2
chrX	7756002	7760430	+	7756002;7759106	7758969;7760430	ES	0.33	50	50	ENSMUST00000153620.3	ENSMUSG00000031156.19	Slc35a2	chrX	protein_coding	solute carrier family 35 (UDP-galactose transporter), member A2
chrX	7759654	7760430	+	7756002	7760430	A5SS	0.33	50	50	ENSMUST00000123277.8	ENSMUSG00000031156.19	Slc35a2	chrX	protein_coding	solute carrier family 35 (UDP-galactose transporter), member A2
chrX	7764875	7765010	-	7764875	7765408	A5SS	0.25	50	50	ENSMUST00000033497.9	ENSMUSG00000031157.11	Pqbp1	chrX	protein_coding	polyglutamine binding protein 1
chrX	7764875	7765019	-	7764875	7765408	A5SS	0.25	50	50	ENSMUST00000033497.9	ENSMUSG00000031157.11	Pqbp1	chrX	protein_coding	polyglutamine binding protein 1
chrX	7764875	7765205	-	7764875	7765408	A5SS	0.25	50	50	ENSMUST00000033497.9	ENSMUSG00000031157.11	Pqbp1	chrX	protein_coding	polyglutamine binding protein 1
chrX	7764875	7765019	-	7764875	7765010	A5SS	0.25	50	50	ENSMUST00000115655.8	ENSMUSG00000031157.11	Pqbp1	chrX	protein_coding	polyglutamine binding protein 1
chrX	7764875	7765205	-	7764875	7765010	A5SS	0.25	50	50	ENSMUST00000115655.8	ENSMUSG00000031157.11	Pqbp1	chrX	protein_coding	polyglutamine binding protein 1
chrX	7764875	7765019	-	7764875	7765205	A5SS	0.25	50	50	ENSMUST00000156741.8	ENSMUSG00000031157.11	Pqbp1	chrX	protein_coding	polyglutamine binding protein 1
chrX	7766004	7767200	+	7765708	7767200	A5SS	0.5	50	50	ENSMUST00000033498.10	ENSMUSG00000031158.12	Timm17b	chrX	protein_coding	translocase of inner mitochondrial membrane 17b
chrX	7813267	7813364	-	7813270	7813364	A3SS	0.5	50	50	ENSMUST00000115642.8	ENSMUSG00000031161.16	Hdac6	chrX	protein_coding	histone deacetylase 6
chrX	7813483	7813814	-	7813483	7813889	A5SS	0.5	50	50	ENSMUST00000115642.8	ENSMUSG00000031161.16	Hdac6	chrX	protein_coding	histone deacetylase 6
chrX	7829480	7842719	-	7829480	7834006	5pMXE	0.33	50	50	ENSMUST00000033502.14	ENSMUSG00000031162.15	Gata1	chrX	protein_coding	GATA binding protein 1
chrX	7829480	7830198	-	7829480	7834006	A5SS	0.33	50	50	ENSMUST00000033502.14	ENSMUSG00000031162.15	Gata1	chrX	protein_coding	GATA binding protein 1
chrX	7829480	7830198	-	7829480	7842719	A5SS	0.33	50	50	ENSMUST00000125418.2	ENSMUSG00000031162.15	Gata1	chrX	protein_coding	GATA binding protein 1
chrX	7926525	7936875	+	7909209	7936875	A5SS	0.5	50	50	ENSMUST00000145941.3	ENSMUSG00000087193.8	Gm14820	chrX	lncRNA	predicted gene 14820
chrX	7915822	7926455	+	7915822	7925859	3pMXE	0.5	50	50	ENSMUST00000149438.2	ENSMUSG00000087193.8	Gm14820	chrX	lncRNA	predicted gene 14820
chrX	7937303	7940814	+	7937303	7938586	3pMXE	0.5	50	50	ENSMUST00000126286.8	ENSMUSG00000087193.8	Gm14820	chrX	lncRNA	predicted gene 14820
chrX	7917896	7926455	+	7915822	7926455	A5SS	0.5	50	50	ENSMUST00000126286.8	ENSMUSG00000087193.8	Gm14820	chrX	lncRNA	predicted gene 14820
chrX	7935359	7936827	-	7930296	7936827	A3SS	0.5	50	50	ENSMUST00000115638.10	ENSMUSG00000039231.19	Suv39h1	chrX	protein_coding	suppressor of variegation 3-9 1
chrX	7938707	7940355	-	7938707	7940783	A5SS	0.5	50	50	ENSMUST00000115638.10	ENSMUSG00000039231.19	Suv39h1	chrX	protein_coding	suppressor of variegation 3-9 1
chrX	7997830	7998526	-	7997864	7998526	A3SS	0.33	50	50	ENSMUST00000033506.13	ENSMUSG00000031166.14	Wdr13	chrX	protein_coding	WD repeat domain 13
chrX	7998116	7998526	-	7997864	7998526	A3SS	0.33	50	50	ENSMUST00000033506.13	ENSMUSG00000031166.14	Wdr13	chrX	protein_coding	WD repeat domain 13
chrX	7996604	7998945	-	7996604	7997624	A5SS&ES	0.5	50	50	ENSMUST00000033506.13	ENSMUSG00000031166.14	Wdr13	chrX	protein_coding	WD repeat domain 13
chrX	7998116	7998526	-	7997830	7998526	A3SS	0.33	50	50	ENSMUST00000133292.8	ENSMUSG00000031166.14	Wdr13	chrX	protein_coding	WD repeat domain 13
chrX	7998605	7999009	-	7998605	7998945	A5SS	0.5	50	50	ENSMUST00000127062.9	ENSMUSG00000031166.14	Wdr13	chrX	protein_coding	WD repeat domain 13
chrX	7998605	7998945	-	7996604	7998945	A3SS	0.5	50	50	ENSMUST00000148135.8	ENSMUSG00000031166.14	Wdr13	chrX	protein_coding	WD repeat domain 13
chrX	8007447	8009486	-	8007447	8009066	5pMXE	0.33	50	50	ENSMUST00000155599.2	ENSMUSG00000031167.17	Rbm3	chrX	protein_coding	RNA binding motif (RNP1, RRM) protein 3
chrX	8007447	8009490	-	8007447	8009066	5pMXE	0.33	50	50	ENSMUST00000155599.2	ENSMUSG00000031167.17	Rbm3	chrX	protein_coding	RNA binding motif (RNP1, RRM) protein 3
chrX	8007447;8009194	8009066;8009490	-	8007447	8009490	cassetteExon	0.5	100	100	ENSMUST00000040010.10	ENSMUSG00000031167.17	Rbm3	chrX	protein_coding	RNA binding motif (RNP1, RRM) protein 3
chrX	8010186;8010684	8010414;8010812	-	8010186	8010812	cassetteExon	0.5	100	100	ENSMUST00000040010.10	ENSMUSG00000031167.17	Rbm3	chrX	protein_coding	RNA binding motif (RNP1, RRM) protein 3
chrX	8009568	8009897	-	8009571	8009897	A3SS	0.5	50	50	ENSMUST00000040010.10	ENSMUSG00000031167.17	Rbm3	chrX	protein_coding	RNA binding motif (RNP1, RRM) protein 3
chrX	8007447	8009486	-	8007447	8009490	A5SS	0.33	50	50	ENSMUST00000040010.10	ENSMUSG00000031167.17	Rbm3	chrX	protein_coding	RNA binding motif (RNP1, RRM) protein 3
chrX	8007447;8009194	8009066;8009486	-	8007447	8009486	cassetteExon	0.5	100	100	ENSMUST00000115619.8	ENSMUSG00000031167.17	Rbm3	chrX	protein_coding	RNA binding motif (RNP1, RRM) protein 3
chrX	8007447	8009490	-	8009194	8009490	3pMXE	0.5	50	50	ENSMUST00000115621.9	ENSMUSG00000031167.17	Rbm3	chrX	protein_coding	RNA binding motif (RNP1, RRM) protein 3
chrX	8009194	8009486	-	8009194	8009490	A5SS	0.5	50	50	ENSMUST00000115621.9	ENSMUSG00000031167.17	Rbm3	chrX	protein_coding	RNA binding motif (RNP1, RRM) protein 3
chrX	8007447	8009486	-	8009194	8009486	3pMXE	0.5	50	50	ENSMUST00000115615.9	ENSMUSG00000031167.17	Rbm3	chrX	protein_coding	RNA binding motif (RNP1, RRM) protein 3
chrX	8012287	8012731	+	8011970	8012731	A5SS	0.5	50	50	ENSMUST00000124018.8	ENSMUSG00000055188.13	Rbm3os	chrX	lncRNA	RNA binding motif protein 3, opposite strand
chrX	8023017	8040440	-	8023017;8039131	8038977;8040440	ES	0.5	50	50	ENSMUST00000239441.2	ENSMUSG00000039201.11	Tbc1d25	chrX	protein_coding	TBC1 domain family, member 25
chrX	8056675	8059536	-	8056675	8059040	A5SS	0.5	50	50	ENSMUST00000033509.15	ENSMUSG00000031168.15	Ebp	chrX	protein_coding	phenylalkylamine Ca2+ antagonist (emopamil) binding protein
chrX	8067808	8069398	-	8067808;8069282	8069265;8069398	ES	0.33	50	50	ENSMUST00000082320.12	ENSMUSG00000031169.14	Porcn	chrX	protein_coding	porcupine O-acyltransferase
chrX	8070074	8071804	-	8070074;8070627	8070435;8071804	ES	0.33	50	50	ENSMUST00000082320.12	ENSMUSG00000031169.14	Porcn	chrX	protein_coding	porcupine O-acyltransferase
chrX	8067808;8067911	8067897;8069265	-	8067808	8069265	cassetteExon	0.5	100	100	ENSMUST00000082320.12	ENSMUSG00000031169.14	Porcn	chrX	protein_coding	porcupine O-acyltransferase
chrX	8067808;8067911	8067897;8069398	-	8067808;8069282	8069265;8069398	MXE	0.5	100	100	ENSMUST00000082320.12	ENSMUSG00000031169.14	Porcn	chrX	protein_coding	porcupine O-acyltransferase
chrX	8070556	8071804	-	8070627	8071804	A3SS	0.33	50	50	ENSMUST00000082320.12	ENSMUSG00000031169.14	Porcn	chrX	protein_coding	porcupine O-acyltransferase
chrX	8064324	8064445	-	8064324	8065306	A5SS	0.5	50	50	ENSMUST00000082320.12	ENSMUSG00000031169.14	Porcn	chrX	protein_coding	porcupine O-acyltransferase
chrX	8067808;8069789	8069398;8070031	-	8067808	8070031	cassetteExon	0.5	100	100	ENSMUST00000154695.8	ENSMUSG00000031169.14	Porcn	chrX	protein_coding	porcupine O-acyltransferase
chrX	8070074;8070556	8070435;8071804	-	8070074	8071804	cassetteExon	0.5	100	100	ENSMUST00000154695.8	ENSMUSG00000031169.14	Porcn	chrX	protein_coding	porcupine O-acyltransferase
chrX	8067808	8067897	-	8067808	8070031	A5SS	0.25	50	50	ENSMUST00000154695.8	ENSMUSG00000031169.14	Porcn	chrX	protein_coding	porcupine O-acyltransferase
chrX	8067808	8069265	-	8067808	8070031	A5SS	0.25	50	50	ENSMUST00000154695.8	ENSMUSG00000031169.14	Porcn	chrX	protein_coding	porcupine O-acyltransferase
chrX	8067808	8069398	-	8067808;8067911	8067897;8069398	ES	0.33	50	50	ENSMUST00000089403.10	ENSMUSG00000031169.14	Porcn	chrX	protein_coding	porcupine O-acyltransferase
chrX	8067911;8069282	8069265;8069398	-	8067911	8069398	cassetteExon	0.5	100	100	ENSMUST00000089403.10	ENSMUSG00000031169.14	Porcn	chrX	protein_coding	porcupine O-acyltransferase
chrX	8111669	8111791	-	8111711	8111791	A3SS	0.5	50	50	ENSMUST00000033513.10	ENSMUSG00000031171.12	Ftsj1	chrX	protein_coding	FtsJ RNA methyltransferase homolog 1 (E. coli)
chrX	8111888	8112575	-	8111894	8112575	A3SS	0.5	50	50	ENSMUST00000033513.10	ENSMUSG00000031171.12	Ftsj1	chrX	protein_coding	FtsJ RNA methyltransferase homolog 1 (E. coli)
chrX	8137499	8138126	+	8137420	8138126	A5SS	0.33	50	50	ENSMUST00000127103.8	ENSMUSG00000031170.15	Slc38a5	chrX	protein_coding	solute carrier family 38, member 5
chrX	8137744	8138126	+	8137420	8138126	A5SS	0.33	50	50	ENSMUST00000127103.8	ENSMUSG00000031170.15	Slc38a5	chrX	protein_coding	solute carrier family 38, member 5
chrX	8137744	8138126	+	8137499	8138126	A5SS	0.33	50	50	ENSMUST00000115591.8	ENSMUSG00000031170.15	Slc38a5	chrX	protein_coding	solute carrier family 38, member 5
chrX	8325443;8327271	8327095;8327843	-	8325443	8327843	cassetteExon	0.5	100	100	ENSMUST00000103000.9	ENSMUSG00000023165.14	Ssxb2	chrX	protein_coding	synovial sarcoma, X member B2
chrX	9320015	9323199	-	9320015;9321518	9321373;9323199	ES	0.5	50	50	ENSMUST00000015484.10	ENSMUSG00000015340.11	Cybb	chrX	protein_coding	cytochrome b-245, beta polypeptide
chrX	9317050	9317690	-	9317050	9319825	A5SS	0.5	50	50	ENSMUST00000015484.10	ENSMUSG00000015340.11	Cybb	chrX	protein_coding	cytochrome b-245, beta polypeptide
chrX	9523403	9525767	-	9523403	9527219	A5SS	0.5	50	50	ENSMUST00000033519.3	ENSMUSG00000031176.9	Dynlt3	chrX	protein_coding	dynein light chain Tctex-type 3
chrX	9822687	9826253	+	9822687;9823488	9823423;9826253	ES	0.5	50	50	ENSMUST00000067529.9	ENSMUSG00000054453.12	Sytl5	chrX	protein_coding	synaptotagmin-like 5
chrX	9935803	9983683	-	9935803;9940067	9940008;9983683	ES	0.33	50	50	ENSMUST00000044789.10	ENSMUSG00000090084.8	Srpx	chrX	protein_coding	sushi-repeat-containing protein
chrX	9940067	10030961	-	9940067	9983683	5pMXE	0.5	50	50	ENSMUST00000044789.10	ENSMUSG00000090084.8	Srpx	chrX	protein_coding	sushi-repeat-containing protein
chrX	9933840	9983683	-	9933840;9935803	9935612;9983683	ES	0.33	50	50	ENSMUST00000115544.9	ENSMUSG00000090084.8	Srpx	chrX	protein_coding	sushi-repeat-containing protein
chrX	9940067	9983683	-	9933840	9983683	A3SS	0.33	50	50	ENSMUST00000115543.3	ENSMUSG00000090084.8	Srpx	chrX	protein_coding	sushi-repeat-containing protein
chrX	9935803	9983683	-	9940067	9983683	3pMXE	0.33	50	50	ENSMUST00000147334.2	ENSMUSG00000090084.8	Srpx	chrX	protein_coding	sushi-repeat-containing protein
chrX	10028929	10030961	-	9940067	10030961	A3SS	0.5	50	50	ENSMUST00000072393.9	ENSMUSG00000031174.18	Rpgr	chrX	protein_coding	retinitis pigmentosa GTPase regulator
chrX	10043120	10044510	-	10032515	10044510	A3SS	0.5	50	50	ENSMUST00000072393.9	ENSMUSG00000031174.18	Rpgr	chrX	protein_coding	retinitis pigmentosa GTPase regulator
chrX	10032515	10042242	-	10032515	10044510	A5SS	0.5	50	50	ENSMUST00000072393.9	ENSMUSG00000031174.18	Rpgr	chrX	protein_coding	retinitis pigmentosa GTPase regulator
chrX	10079893	10081464	-	10079893	10082791	A5SS	0.33	50	50	ENSMUST00000072393.9	ENSMUSG00000031174.18	Rpgr	chrX	protein_coding	retinitis pigmentosa GTPase regulator
chrX	10079893	10082455	-	10079893	10082791	A5SS	0.33	50	50	ENSMUST00000072393.9	ENSMUSG00000031174.18	Rpgr	chrX	protein_coding	retinitis pigmentosa GTPase regulator
chrX	10079893;10081598	10081464;10082455	-	10079893	10082455	cassetteExon	0.5	100	100	ENSMUST00000115534.8	ENSMUSG00000031174.18	Rpgr	chrX	protein_coding	retinitis pigmentosa GTPase regulator
chrX	10025088	10028841	-	10025119	10028841	A3SS	0.33	50	50	ENSMUST00000115534.8	ENSMUSG00000031174.18	Rpgr	chrX	protein_coding	retinitis pigmentosa GTPase regulator
chrX	10027019	10028841	-	10025119	10028841	A3SS	0.33	50	50	ENSMUST00000115534.8	ENSMUSG00000031174.18	Rpgr	chrX	protein_coding	retinitis pigmentosa GTPase regulator
chrX	10032515	10044510	-	10032515;10043120	10042242;10044510	ES	0.5	50	50	ENSMUST00000044598.13	ENSMUSG00000031174.18	Rpgr	chrX	protein_coding	retinitis pigmentosa GTPase regulator
chrX	10027019	10028841	-	10025088	10028841	A3SS	0.33	50	50	ENSMUST00000115533.8	ENSMUSG00000031174.18	Rpgr	chrX	protein_coding	retinitis pigmentosa GTPase regulator
chrX	10178769	10181182	+	10178769	10186082	A3SS	0.5	50	50	ENSMUST00000049910.13	ENSMUSG00000031173.14	Otc	chrX	protein_coding	ornithine transcarbamylase
chrX	10581306	10584226	+	10581306	10582637	3pMXE	0.5	50	50	ENSMUST00000125623.2	ENSMUSG00000008035.13	Mid1ip1	chrX	protein_coding	Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))
chrX	10583739	10584226	+	10581306	10584226	A5SS	0.33	50	50	ENSMUST00000144356.8	ENSMUSG00000008035.13	Mid1ip1	chrX	protein_coding	Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))
chrX	10583943	10584226	+	10581306	10584226	A5SS	0.33	50	50	ENSMUST00000144356.8	ENSMUSG00000008035.13	Mid1ip1	chrX	protein_coding	Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))
chrX	10583943	10584226	+	10583943	10584223	A3SS	0.5	50	50	ENSMUST00000115524.8	ENSMUSG00000008035.13	Mid1ip1	chrX	protein_coding	Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))
chrX	10583739	10584226	+	10583943	10584226	A5SS	0.33	50	50	ENSMUST00000008179.7	ENSMUSG00000008035.13	Mid1ip1	chrX	protein_coding	Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))
chrX	11921394	11922583	-	11921394;11921931	11921878;11922583	ES	0.5	50	50	ENSMUST00000115513.9	ENSMUSG00000040363.16	Bcor	chrX	protein_coding	BCL6 interacting corepressor
chrX	11927885	11994458	-	11927885	11946057	5pMXE	0.25	50	50	ENSMUST00000115513.9	ENSMUSG00000040363.16	Bcor	chrX	protein_coding	BCL6 interacting corepressor
chrX	11927885	11994481	-	11927885	11946057	5pMXE	0.25	50	50	ENSMUST00000115513.9	ENSMUSG00000040363.16	Bcor	chrX	protein_coding	BCL6 interacting corepressor
chrX	11927885	12026528	-	11927885	11946057	5pMXE	0.25	50	50	ENSMUST00000115513.9	ENSMUSG00000040363.16	Bcor	chrX	protein_coding	BCL6 interacting corepressor
chrX	11914784	11915234	-	11914886	11915234	A3SS	0.5	50	50	ENSMUST00000115513.9	ENSMUSG00000040363.16	Bcor	chrX	protein_coding	BCL6 interacting corepressor
chrX	12003709	12026528	-	11927885	12026528	A3SS	0.5	50	50	ENSMUST00000043441.13	ENSMUSG00000040363.16	Bcor	chrX	protein_coding	BCL6 interacting corepressor
chrX	11927885	11994458	-	11927885	12026528	A5SS	0.25	50	50	ENSMUST00000043441.13	ENSMUSG00000040363.16	Bcor	chrX	protein_coding	BCL6 interacting corepressor
chrX	11927885	11994481	-	11927885	12026528	A5SS	0.25	50	50	ENSMUST00000043441.13	ENSMUSG00000040363.16	Bcor	chrX	protein_coding	BCL6 interacting corepressor
chrX	11927885	11994458	-	11927885	11994481	A5SS	0.25	50	50	ENSMUST00000145872.8	ENSMUSG00000040363.16	Bcor	chrX	protein_coding	BCL6 interacting corepressor
chrX	12209577	12211257	-	12209577	12221120	A5SS	0.5	50	50	ENSMUST00000146535.8	ENSMUSG00000087591.8	Gm14635	chrX	lncRNA	predicted gene 14635
chrX	12553440	12559824	-	12553440;12555699	12555568;12559824	ES	0.5	50	50	ENSMUST00000096495.11	ENSMUSG00000064127.14	Med14	chrX	protein_coding	mediator complex subunit 14
chrX	12575479	12579822	-	12572931	12579822	A3SS	0.5	50	50	ENSMUST00000096495.11	ENSMUSG00000064127.14	Med14	chrX	protein_coding	mediator complex subunit 14
chrX	12937972	12960163	+	12937972;12938564	12938454;12960163	ES	0.5	50	50	ENSMUST00000169594.9	ENSMUSG00000031010.18	Usp9x	chrX	protein_coding	ubiquitin specific peptidase 9, X chromosome
chrX	12980883	12982848	+	12980883	12982863	A3SS	0.5	50	50	ENSMUST00000169594.9	ENSMUSG00000031010.18	Usp9x	chrX	protein_coding	ubiquitin specific peptidase 9, X chromosome
chrX	13031771	13032871	+	13031723	13032871	A5SS	0.5	50	50	ENSMUST00000089302.11	ENSMUSG00000031010.18	Usp9x	chrX	protein_coding	ubiquitin specific peptidase 9, X chromosome
chrX	13101738	13113744	-	13101738	13102440	5pMXE	0.5	50	50	ENSMUST00000186827.7	ENSMUSG00000100714.7	2010308F09Rik	chrX	lncRNA	RIKEN cDNA 2010308F09 gene
chrX	13415600	13421117	-	13415600;13417221	13417186;13421117	ES	0.33	50	50	ENSMUST00000156096.8	ENSMUSG00000031012.18	Cask	chrX	protein_coding	calcium/calmodulin-dependent serine protein kinase (MAGUK family)
chrX	13388586;13391090	13391064;13392237	-	13388586	13392237	cassetteExon	0.5	100	100	ENSMUST00000156096.8	ENSMUSG00000031012.18	Cask	chrX	protein_coding	calcium/calmodulin-dependent serine protein kinase (MAGUK family)
chrX	13415600;13418680	13418612;13421117	-	13415600;13417221	13417186;13421117	MXE	0.5	100	100	ENSMUST00000156096.8	ENSMUSG00000031012.18	Cask	chrX	protein_coding	calcium/calmodulin-dependent serine protein kinase (MAGUK family)
chrX	13417221;13418680	13418612;13421117	-	13417221	13421117	cassetteExon	0.5	100	100	ENSMUST00000156096.8	ENSMUSG00000031012.18	Cask	chrX	protein_coding	calcium/calmodulin-dependent serine protein kinase (MAGUK family)
chrX	13453204;13462942	13462925;13466596	-	13453204	13466596	cassetteExon	0.5	100	100	ENSMUST00000156096.8	ENSMUSG00000031012.18	Cask	chrX	protein_coding	calcium/calmodulin-dependent serine protein kinase (MAGUK family)
chrX	13392320	13392932	-	13392320	13399579	A5SS	0.5	50	50	ENSMUST00000156096.8	ENSMUSG00000031012.18	Cask	chrX	protein_coding	calcium/calmodulin-dependent serine protein kinase (MAGUK family)
chrX	13581010	13652158	-	13581010	13652176	A5SS	0.5	50	50	ENSMUST00000156096.8	ENSMUSG00000031012.18	Cask	chrX	protein_coding	calcium/calmodulin-dependent serine protein kinase (MAGUK family)
chrX	13652288	13717407	-	13652288	13712247	5pMXE	0.5	50	50	ENSMUST00000115436.9	ENSMUSG00000031012.18	Cask	chrX	protein_coding	calcium/calmodulin-dependent serine protein kinase (MAGUK family)
chrX	13415600	13418612	-	13415600;13417221	13417186;13418612	ES	0.5	50	50	ENSMUST00000115438.10	ENSMUSG00000031012.18	Cask	chrX	protein_coding	calcium/calmodulin-dependent serine protein kinase (MAGUK family)
chrX	13415600	13421117	-	13415600;13418680	13418612;13421117	ES	0.33	50	50	ENSMUST00000033321.11	ENSMUSG00000031012.18	Cask	chrX	protein_coding	calcium/calmodulin-dependent serine protein kinase (MAGUK family)
chrX	15791216	15805374	-	15791216	15799469	5pMXE	0.5	50	50	ENSMUST00000151575.8	ENSMUSG00000086048.8	Drr1	chrX	lncRNA	developmentally regulated repeat element-containing transcript 1
chrX	16389422	16389568	+	16389407	16389568	A5SS	0.5	50	50	ENSMUST00000115422.2	ENSMUSG00000023257.4	Cypt1	chrX	protein_coding	cysteine-rich perinuclear theca 1
chrX	16600356	16602211	-	16600462	16602211	A3SS	0.5	50	50	ENSMUST00000040820.13	ENSMUSG00000040147.15	Maob	chrX	protein_coding	monoamine oxidase B
chrX	16681685	16683469	-	16637258	16683469	A3SS	0.5	50	50	ENSMUST00000040820.13	ENSMUSG00000040147.15	Maob	chrX	protein_coding	monoamine oxidase B
chrX	16637258	16673774	-	16637258	16683469	A5SS	0.5	50	50	ENSMUST00000040820.13	ENSMUSG00000040147.15	Maob	chrX	protein_coding	monoamine oxidase B
chrX	16606414	16634617	-	16602352	16634617	A3SS	0.5	50	50	ENSMUST00000163344.2	ENSMUSG00000040147.15	Maob	chrX	protein_coding	monoamine oxidase B
chrX	16602352	16605333	-	16602352	16634617	A5SS	0.5	50	50	ENSMUST00000163344.2	ENSMUSG00000040147.15	Maob	chrX	protein_coding	monoamine oxidase B
chrX	17424250	17434272	-	17424250;17425048	17424920;17434272	ES	0.5	50	50	ENSMUST00000026016.13	ENSMUSG00000025040.14	Fundc1	chrX	protein_coding	FUN14 domain containing 1
chrX	17434347	17435493	-	17434347	17437542	A5SS	0.5	50	50	ENSMUST00000026016.13	ENSMUSG00000025040.14	Fundc1	chrX	protein_coding	FUN14 domain containing 1
chrX	17437698	17438108	-	17437698	17438392	A5SS	0.5	50	50	ENSMUST00000026016.13	ENSMUSG00000025040.14	Fundc1	chrX	protein_coding	FUN14 domain containing 1
chrX	18089116	18102900	+	18089116;18100153	18100099;18102900	ES	0.5	50	50	ENSMUST00000044484.13	ENSMUSG00000037369.18	Kdm6a	chrX	protein_coding	lysine (K)-specific demethylase 6A
chrX	18112655	18114509	+	18112655;18113348	18113214;18114509	ES	0.33	50	50	ENSMUST00000044484.13	ENSMUSG00000037369.18	Kdm6a	chrX	protein_coding	lysine (K)-specific demethylase 6A
chrX	18112655;18113961	18113806;18114509	+	18112655;18113348	18113214;18114509	MXE	0.5	100	100	ENSMUST00000044484.13	ENSMUSG00000037369.18	Kdm6a	chrX	protein_coding	lysine (K)-specific demethylase 6A
chrX	18113348;18113961	18113806;18114509	+	18113348	18114509	cassetteExon	0.5	100	100	ENSMUST00000044484.13	ENSMUSG00000037369.18	Kdm6a	chrX	protein_coding	lysine (K)-specific demethylase 6A
chrX	18143802	18144865	+	18143785	18144865	A5SS	0.5	50	50	ENSMUST00000044484.13	ENSMUSG00000037369.18	Kdm6a	chrX	protein_coding	lysine (K)-specific demethylase 6A
chrX	18112655;18113961	18113806;18114509	+	18112655	18114509	cassetteExon	0.5	100	100	ENSMUST00000223885.2	ENSMUSG00000037369.18	Kdm6a	chrX	protein_coding	lysine (K)-specific demethylase 6A
chrX	18112655;18113348	18113214;18113806	+	18112655	18113806	cassetteExon	0.5	100	100	ENSMUST00000224255.2	ENSMUSG00000037369.18	Kdm6a	chrX	protein_coding	lysine (K)-specific demethylase 6A
chrX	18112655	18114509	+	18113961	18114509	5pMXE	0.33	50	50	ENSMUST00000226046.2	ENSMUSG00000037369.18	Kdm6a	chrX	protein_coding	lysine (K)-specific demethylase 6A
chrX	18113348	18114509	+	18113961	18114509	5pMXE	0.33	50	50	ENSMUST00000226046.2	ENSMUSG00000037369.18	Kdm6a	chrX	protein_coding	lysine (K)-specific demethylase 6A
chrX	18314081	18327263	-	18314081;18315750	18315538;18327263	ES	0.5	50	50	ENSMUST00000147039.2	ENSMUSG00000037358.7	Dipk2b	chrX	protein_coding	divergent protein kinase domain 2B
chrX	19998073;20005211	20005152;20025054	-	19998073	20025054	cassetteExon	0.5	100	100	ENSMUST00000224372.2	ENSMUSG00000037341.15	Slc9a7	chrX	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 7
chrX	20019140	20025054	-	19998073	20025054	A3SS	0.33	50	50	ENSMUST00000224372.2	ENSMUSG00000037341.15	Slc9a7	chrX	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 7
chrX	20019140	20025054	-	20005211	20025054	A3SS	0.33	50	50	ENSMUST00000072451.11	ENSMUSG00000037341.15	Slc9a7	chrX	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 7
chrX	20055159	20068949	-	19998073	20068949	A3SS	0.5	50	50	ENSMUST00000151845.8	ENSMUSG00000037341.15	Slc9a7	chrX	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 7
chrX	19998073	20005152	-	19998073	20068949	A5SS	0.33	50	50	ENSMUST00000151845.8	ENSMUSG00000037341.15	Slc9a7	chrX	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 7
chrX	19998073	20025054	-	19998073	20068949	A5SS	0.33	50	50	ENSMUST00000151845.8	ENSMUSG00000037341.15	Slc9a7	chrX	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 7
chrX	20263545	20269454	+	20263545	20263891	3pMXE	0.33	50	50	ENSMUST00000033372.13	ENSMUSG00000060090.17	Rp2	chrX	protein_coding	retinitis pigmentosa 2 homolog
chrX	20263545	20270288	+	20263545	20263891	3pMXE	0.33	50	50	ENSMUST00000033372.13	ENSMUSG00000060090.17	Rp2	chrX	protein_coding	retinitis pigmentosa 2 homolog
chrX	20231067;20231437	20231279;20243120	+	20231067	20243120	cassetteExon	0.5	100	100	ENSMUST00000033372.13	ENSMUSG00000060090.17	Rp2	chrX	protein_coding	retinitis pigmentosa 2 homolog
chrX	20263545;20269590	20269454;20270288	+	20263545	20270288	cassetteExon	0.5	100	100	ENSMUST00000134349.8	ENSMUSG00000060090.17	Rp2	chrX	protein_coding	retinitis pigmentosa 2 homolog
chrX	20345910;20353661	20353537;20355941	+	20345910	20355941	cassetteExon	0.5	100	100	ENSMUST00000115384.9	ENSMUSG00000037315.16	Jade3	chrX	protein_coding	jade family PHD finger 3
chrX	20502153	20505672	+	20502153;20503895	20503665;20505672	ES	0.5	50	50	ENSMUST00000115375.8	ENSMUSG00000031060.17	Rbm10	chrX	protein_coding	RNA binding motif protein 10
chrX	20484290	20486213	+	20484321	20486213	A5SS	0.5	50	50	ENSMUST00000115375.8	ENSMUSG00000031060.17	Rbm10	chrX	protein_coding	RNA binding motif protein 10
chrX	20511836	20512008	+	20511833	20512008	A5SS	0.5	50	50	ENSMUST00000115375.8	ENSMUSG00000031060.17	Rbm10	chrX	protein_coding	RNA binding motif protein 10
chrX	20524765;20525535	20525439;20534688	+	20524765	20534688	cassetteExon	0.5	100	100	ENSMUST00000089217.11	ENSMUSG00000001924.16	Uba1	chrX	protein_coding	ubiquitin-like modifier activating enzyme 1
chrX	20524765;20525805	20525439;20534688	+	20524765	20534688	cassetteExon	0.5	100	100	ENSMUST00000089217.11	ENSMUSG00000001924.16	Uba1	chrX	protein_coding	ubiquitin-like modifier activating enzyme 1
chrX	20529364	20534688	+	20524765	20534688	A5SS	0.25	50	50	ENSMUST00000089217.11	ENSMUSG00000001924.16	Uba1	chrX	protein_coding	ubiquitin-like modifier activating enzyme 1
chrX	20525805	20534688	+	20525535	20534688	A5SS	0.25	50	50	ENSMUST00000152235.8	ENSMUSG00000001924.16	Uba1	chrX	protein_coding	ubiquitin-like modifier activating enzyme 1
chrX	20529364	20534688	+	20525535	20534688	A5SS	0.25	50	50	ENSMUST00000152235.8	ENSMUSG00000001924.16	Uba1	chrX	protein_coding	ubiquitin-like modifier activating enzyme 1
chrX	20524765	20534688	+	20525805	20534688	5pMXE	0.25	50	50	ENSMUST00000130694.2	ENSMUSG00000001924.16	Uba1	chrX	protein_coding	ubiquitin-like modifier activating enzyme 1
chrX	20529364	20534688	+	20525805	20534688	A5SS	0.25	50	50	ENSMUST00000130694.2	ENSMUSG00000001924.16	Uba1	chrX	protein_coding	ubiquitin-like modifier activating enzyme 1
chrX	20559770	20560277	+	20559770	20560146	A3SS	0.5	50	50	ENSMUST00000115364.8	ENSMUSG00000031065.15	Cdk16	chrX	protein_coding	cyclin-dependent kinase 16
chrX	20564767	20565469	+	20564767	20564848	A3SS	0.5	50	50	ENSMUST00000115364.8	ENSMUSG00000031065.15	Cdk16	chrX	protein_coding	cyclin-dependent kinase 16
chrX	20555045	20559563	+	20554600	20559563	A5SS	0.5	50	50	ENSMUST00000115364.8	ENSMUSG00000031065.15	Cdk16	chrX	protein_coding	cyclin-dependent kinase 16
chrX	20570358;20573221	20573151;20577988	+	20570358	20577988	cassetteExon	0.5	100	100	ENSMUST00000033383.3	ENSMUSG00000031066.11	Usp11	chrX	protein_coding	ubiquitin specific peptidase 11
chrX	20720354	20723851	+	20720354;20723761	20723650;20723851	ES	0.5	50	50	ENSMUST00000136451.8	ENSMUSG00000001127.13	Araf	chrX	protein_coding	Araf proto-oncogene, serine/threonine kinase
chrX	20720354	20720501	+	20720354	20723650	A3SS	0.33	50	50	ENSMUST00000136451.8	ENSMUSG00000001127.13	Araf	chrX	protein_coding	Araf proto-oncogene, serine/threonine kinase
chrX	20724751	20725005	+	20724751	20724981	A3SS	0.5	50	50	ENSMUST00000136451.8	ENSMUSG00000001127.13	Araf	chrX	protein_coding	Araf proto-oncogene, serine/threonine kinase
chrX	20714858	20716166	+	20664120	20716166	A5SS	0.33	50	50	ENSMUST00000136451.8	ENSMUSG00000001127.13	Araf	chrX	protein_coding	Araf proto-oncogene, serine/threonine kinase
chrX	20715395	20716166	+	20664120	20716166	A5SS	0.33	50	50	ENSMUST00000136451.8	ENSMUSG00000001127.13	Araf	chrX	protein_coding	Araf proto-oncogene, serine/threonine kinase
chrX	20714858;20715395	20715351;20716166	+	20714858	20716166	cassetteExon	0.5	100	100	ENSMUST00000001155.11	ENSMUSG00000001127.13	Araf	chrX	protein_coding	Araf proto-oncogene, serine/threonine kinase
chrX	20720354	20720501	+	20720354	20723851	A3SS	0.33	50	50	ENSMUST00000001155.11	ENSMUSG00000001127.13	Araf	chrX	protein_coding	Araf proto-oncogene, serine/threonine kinase
chrX	20727848	20728738	-	20727810	20728738	A3SS	0.5	50	50	ENSMUST00000115345.8	ENSMUSG00000037217.16	Syn1	chrX	protein_coding	synapsin I
chrX	20736563	20737270	+	20736563	20737273	A3SS	0.5	50	50	ENSMUST00000115342.10	ENSMUSG00000001131.12	Timp1	chrX	protein_coding	tissue inhibitor of metalloproteinase 1
chrX	20791998	20793420	-	20791998	20793520	A5SS	0.5	50	50	ENSMUST00000001156.8	ENSMUSG00000001128.8	Cfp	chrX	protein_coding	complement factor properdin
chrX	20808036	20825974	-	20808036	20816679	5pMXE	0.5	50	50	ENSMUST00000009550.14	ENSMUSG00000009406.14	Elk1	chrX	protein_coding	ELK1, member of ETS oncogene family
chrX	20825704	20825974	-	20808036	20825974	A3SS	0.5	50	50	ENSMUST00000129899.8	ENSMUSG00000001134.10	Uxt	chrX	protein_coding	ubiquitously expressed prefoldin like chaperone
chrX	20826258	20827874	-	20826258	20827919	A5SS	0.5	50	50	ENSMUST00000129899.8	ENSMUSG00000001134.10	Uxt	chrX	protein_coding	ubiquitously expressed prefoldin like chaperone
chrX	20851704	20852229	+	20851704	20852218	A3SS	0.5	50	50	ENSMUST00000123462.8	ENSMUSG00000086877.8	A230072C01Rik	chrX	lncRNA	RIKEN cDNA A230072C01 gene
chrX	20926042	20926742	-	20903011	20926742	A3SS	0.5	50	50	ENSMUST00000115333.9	ENSMUSG00000054737.12	Zfp182	chrX	protein_coding	zinc finger protein 182
chrX	20926791	20928133	-	20926767	20928133	A3SS	0.5	50	50	ENSMUST00000115333.9	ENSMUSG00000054737.12	Zfp182	chrX	protein_coding	zinc finger protein 182
chrX	20926796	20927714	-	20926796	20928177	A5SS	0.5	50	50	ENSMUST00000115334.8	ENSMUSG00000054737.12	Zfp182	chrX	protein_coding	zinc finger protein 182
chrX	20927848	20928182	-	20926762	20928182	A3SS	0.5	50	50	ENSMUST00000133186.2	ENSMUSG00000054737.12	Zfp182	chrX	protein_coding	zinc finger protein 182
chrX	20950581	20954761	-	20950594	20954761	A3SS	0.5	50	50	ENSMUST00000040667.13	ENSMUSG00000031079.13	Zfp300	chrX	protein_coding	zinc finger protein 300
chrX	21085633	21087466	-	21085633;21086032	21085731;21087466	ES	0.5	50	50	ENSMUST00000125569.8	ENSMUSG00000087358.9	4930453H23Rik	chrX	lncRNA	RIKEN cDNA 4930453H23 gene
chrX	21351003	21351090	+	21350933	21351090	A5SS	0.5	50	50	ENSMUST00000089188.9	ENSMUSG00000068122.11	Agtr2	chrX	protein_coding	angiotensin II receptor, type 2
chrX	23181440	23231195	-	23181440;23227823	23227733;23231195	ES	0.5	50	50	ENSMUST00000115313.8	ENSMUSG00000036782.14	Klhl13	chrX	protein_coding	kelch-like 13
chrX	23127812;23160519	23160454;23181369	-	23127812	23181369	cassetteExon	0.5	100	100	ENSMUST00000115313.8	ENSMUSG00000036782.14	Klhl13	chrX	protein_coding	kelch-like 13
chrX	23127812	23132924	-	23127812	23181369	A5SS	0.2	50	50	ENSMUST00000115313.8	ENSMUSG00000036782.14	Klhl13	chrX	protein_coding	kelch-like 13
chrX	23127812	23150799	-	23127812	23181369	A5SS	0.2	50	50	ENSMUST00000115313.8	ENSMUSG00000036782.14	Klhl13	chrX	protein_coding	kelch-like 13
chrX	23127812	23151397	-	23127812	23181369	A5SS	0.2	50	50	ENSMUST00000115313.8	ENSMUSG00000036782.14	Klhl13	chrX	protein_coding	kelch-like 13
chrX	23127812	23160454	-	23127812	23151397	5pMXE	0.2	50	50	ENSMUST00000115319.9	ENSMUSG00000036782.14	Klhl13	chrX	protein_coding	kelch-like 13
chrX	23127812	23132924	-	23127812	23151397	A5SS	0.2	50	50	ENSMUST00000115319.9	ENSMUSG00000036782.14	Klhl13	chrX	protein_coding	kelch-like 13
chrX	23127812	23150799	-	23127812	23151397	A5SS	0.2	50	50	ENSMUST00000115319.9	ENSMUSG00000036782.14	Klhl13	chrX	protein_coding	kelch-like 13
chrX	23127812	23150799	-	23127812	23132924	5pMXE	0.2	50	50	ENSMUST00000115316.9	ENSMUSG00000036782.14	Klhl13	chrX	protein_coding	kelch-like 13
chrX	23127812	23160454	-	23127812	23132924	5pMXE	0.2	50	50	ENSMUST00000115316.9	ENSMUSG00000036782.14	Klhl13	chrX	protein_coding	kelch-like 13
chrX	23127812	23160454	-	23127812	23150799	5pMXE	0.2	50	50	ENSMUST00000115317.9	ENSMUSG00000036782.14	Klhl13	chrX	protein_coding	kelch-like 13
chrX	23160519	23181369	-	23160519	23162252	5pMXE	0.5	50	50	ENSMUST00000144360.8	ENSMUSG00000036782.14	Klhl13	chrX	protein_coding	kelch-like 13
chrX	23559778	23616145	+	23559778;23598590	23598557;23616145	ES	0.5	50	50	ENSMUST00000035766.13	ENSMUSG00000036769.15	Wdr44	chrX	protein_coding	WD repeat domain 44
chrX	26185061	26186515	-	26185064	26186515	A3SS	0.5	50	50	ENSMUST00000121900.8	ENSMUSG00000082639.9	Gm2012	chrX	protein_coding	predicted gene 2012
chrX	26889384	26890861	-	26889381	26890861	A3SS	0.5	50	50	ENSMUST00000167438.2	ENSMUSG00000080725.10	Gm6121	chrX	protein_coding	predicted gene 6121
chrX	27469963	27471425	+	27469963;27470506	27470474;27471425	ES	0.25	50	50	ENSMUST00000128191.8	ENSMUSG00000093817.8	Gm2101	chrX	lncRNA	predicted gene 2101
chrX	27470506	27471844	+	27470506;27471537	27471425;27471844	ES	0.5	50	50	ENSMUST00000128191.8	ENSMUSG00000093817.8	Gm2101	chrX	lncRNA	predicted gene 2101
chrX	27469963;27470752	27470703;27471425	+	27469963;27470506	27470474;27471425	MXE	0.5	100	100	ENSMUST00000128191.8	ENSMUSG00000093817.8	Gm2101	chrX	lncRNA	predicted gene 2101
chrX	27469963;27470866	27470703;27471425	+	27469963;27470506	27470474;27471425	MXE	0.5	100	100	ENSMUST00000128191.8	ENSMUSG00000093817.8	Gm2101	chrX	lncRNA	predicted gene 2101
chrX	27438699	27469877	+	27438648	27469877	A5SS	0.25	50	50	ENSMUST00000128191.8	ENSMUSG00000093817.8	Gm2101	chrX	lncRNA	predicted gene 2101
chrX	27438864	27469877	+	27438648	27469877	A5SS	0.25	50	50	ENSMUST00000128191.8	ENSMUSG00000093817.8	Gm2101	chrX	lncRNA	predicted gene 2101
chrX	27454467	27469877	+	27438648	27469877	A5SS	0.25	50	50	ENSMUST00000128191.8	ENSMUSG00000093817.8	Gm2101	chrX	lncRNA	predicted gene 2101
chrX	27438864	27469877	+	27438864;27454467	27454299;27469877	ES	0.25	50	50	ENSMUST00000137421.8	ENSMUSG00000093817.8	Gm2101	chrX	lncRNA	predicted gene 2101
chrX	27469963;27470506	27470474;27471844	+	27469963;27471537	27471425;27471844	MXE	0.5	100	100	ENSMUST00000137421.8	ENSMUSG00000093817.8	Gm2101	chrX	lncRNA	predicted gene 2101
chrX	27469963;27470752	27470474;27471425	+	27469963	27471425	cassetteExon	0.5	100	100	ENSMUST00000137421.8	ENSMUSG00000093817.8	Gm2101	chrX	lncRNA	predicted gene 2101
chrX	27469963;27470866	27470474;27471425	+	27469963	27471425	cassetteExon	0.5	100	100	ENSMUST00000137421.8	ENSMUSG00000093817.8	Gm2101	chrX	lncRNA	predicted gene 2101
chrX	27469963;27470752	27470703;27471425	+	27469963	27471425	cassetteExon	0.5	100	100	ENSMUST00000137421.8	ENSMUSG00000093817.8	Gm2101	chrX	lncRNA	predicted gene 2101
chrX	27469963;27470866	27470703;27471425	+	27469963	27471425	cassetteExon	0.5	100	100	ENSMUST00000137421.8	ENSMUSG00000093817.8	Gm2101	chrX	lncRNA	predicted gene 2101
chrX	27438699	27469877	+	27454467	27469877	A5SS&ES	0.25	50	50	ENSMUST00000137421.8	ENSMUSG00000093817.8	Gm2101	chrX	lncRNA	predicted gene 2101
chrX	27469963	27470703	+	27469963	27470474	A3SS&ES	0.33	50	50	ENSMUST00000133794.8	ENSMUSG00000093817.8	Gm2101	chrX	lncRNA	predicted gene 2101
chrX	27438699	27469877	+	27438864	27469877	A5SS	0.25	50	50	ENSMUST00000133794.8	ENSMUSG00000093817.8	Gm2101	chrX	lncRNA	predicted gene 2101
chrX	27470506	27471425	+	27470752	27471425	A5SS	0.25	50	50	ENSMUST00000156730.8	ENSMUSG00000093817.8	Gm2101	chrX	lncRNA	predicted gene 2101
chrX	27470506	27471844	+	27471537	27471844	A5SS&ES	0.5	50	50	ENSMUST00000156730.8	ENSMUSG00000093817.8	Gm2101	chrX	lncRNA	predicted gene 2101
chrX	27470866	27471425	+	27470752	27471425	A5SS	0.25	50	50	ENSMUST00000156730.8	ENSMUSG00000093817.8	Gm2101	chrX	lncRNA	predicted gene 2101
chrX	27469963;27470506	27470474;27471844	+	27469963;27471537	27470703;27471844	MXE	0.5	100	100	ENSMUST00000131997.2	ENSMUSG00000093817.8	Gm2101	chrX	lncRNA	predicted gene 2101
chrX	27825011	27826349	+	27825011;27826042	27825930;27826349	ES	0.5	50	50	ENSMUST00000142032.8	ENSMUSG00000085534.8	Gm2117	chrX	lncRNA	predicted gene 2117
chrX	27824468;27825257	27825208;27825930	+	27824468;27825011	27824979;27825930	MXE	0.5	100	100	ENSMUST00000142032.8	ENSMUSG00000085534.8	Gm2117	chrX	lncRNA	predicted gene 2117
chrX	27824468;27825371	27825208;27825930	+	27824468;27825011	27824979;27825930	MXE	0.5	100	100	ENSMUST00000142032.8	ENSMUSG00000085534.8	Gm2117	chrX	lncRNA	predicted gene 2117
chrX	27785589	27824382	+	27785538	27824382	A5SS	0.33	50	50	ENSMUST00000142032.8	ENSMUSG00000085534.8	Gm2117	chrX	lncRNA	predicted gene 2117
chrX	27785754	27824382	+	27785538	27824382	A5SS	0.33	50	50	ENSMUST00000142032.8	ENSMUSG00000085534.8	Gm2117	chrX	lncRNA	predicted gene 2117
chrX	27824468	27825208	+	27824468	27824979	A3SS&ES	0.5	50	50	ENSMUST00000147993.8	ENSMUSG00000085534.8	Gm2117	chrX	lncRNA	predicted gene 2117
chrX	27785589	27824382	+	27785754	27824382	A5SS	0.33	50	50	ENSMUST00000147993.8	ENSMUSG00000085534.8	Gm2117	chrX	lncRNA	predicted gene 2117
chrX	27825011	27825930	+	27825257	27825930	A5SS	0.33	50	50	ENSMUST00000151687.8	ENSMUSG00000085534.8	Gm2117	chrX	lncRNA	predicted gene 2117
chrX	27825011	27826349	+	27826042	27826349	A5SS&ES	0.5	50	50	ENSMUST00000151687.8	ENSMUSG00000085534.8	Gm2117	chrX	lncRNA	predicted gene 2117
chrX	27825371	27825930	+	27825257	27825930	A5SS	0.33	50	50	ENSMUST00000151687.8	ENSMUSG00000085534.8	Gm2117	chrX	lncRNA	predicted gene 2117
chrX	27824468;27825011	27824979;27826349	+	27824468;27826042	27825208;27826349	MXE	0.5	100	100	ENSMUST00000130478.2	ENSMUSG00000085534.8	Gm2117	chrX	lncRNA	predicted gene 2117
chrX	28477948	28479410	+	28477948;28478491	28478459;28479410	ES	0.25	50	50	ENSMUST00000155337.8	ENSMUSG00000096911.8	Gm2165	chrX	lncRNA	predicted gene 2165
chrX	28478491	28479829	+	28478491;28479522	28479410;28479829	ES	0.5	50	50	ENSMUST00000155337.8	ENSMUSG00000096911.8	Gm2165	chrX	lncRNA	predicted gene 2165
chrX	28477948;28478737	28478688;28479410	+	28477948;28478491	28478459;28479410	MXE	0.5	100	100	ENSMUST00000155337.8	ENSMUSG00000096911.8	Gm2165	chrX	lncRNA	predicted gene 2165
chrX	28477948;28478851	28478688;28479410	+	28477948;28478491	28478459;28479410	MXE	0.5	100	100	ENSMUST00000155337.8	ENSMUSG00000096911.8	Gm2165	chrX	lncRNA	predicted gene 2165
chrX	28446688	28477862	+	28446637	28477862	A5SS	0.25	50	50	ENSMUST00000155337.8	ENSMUSG00000096911.8	Gm2165	chrX	lncRNA	predicted gene 2165
chrX	28446853	28477862	+	28446637	28477862	A5SS	0.25	50	50	ENSMUST00000155337.8	ENSMUSG00000096911.8	Gm2165	chrX	lncRNA	predicted gene 2165
chrX	28462453	28477862	+	28446637	28477862	A5SS	0.25	50	50	ENSMUST00000155337.8	ENSMUSG00000096911.8	Gm2165	chrX	lncRNA	predicted gene 2165
chrX	28446853	28477862	+	28446853;28462453	28462285;28477862	ES	0.25	50	50	ENSMUST00000124609.8	ENSMUSG00000096911.8	Gm2165	chrX	lncRNA	predicted gene 2165
chrX	28477948;28478491	28478459;28479829	+	28477948;28479522	28479410;28479829	MXE	0.5	100	100	ENSMUST00000124609.8	ENSMUSG00000096911.8	Gm2165	chrX	lncRNA	predicted gene 2165
chrX	28477948;28478737	28478459;28479410	+	28477948	28479410	cassetteExon	0.5	100	100	ENSMUST00000124609.8	ENSMUSG00000096911.8	Gm2165	chrX	lncRNA	predicted gene 2165
chrX	28477948;28478851	28478459;28479410	+	28477948	28479410	cassetteExon	0.5	100	100	ENSMUST00000124609.8	ENSMUSG00000096911.8	Gm2165	chrX	lncRNA	predicted gene 2165
chrX	28477948;28478737	28478688;28479410	+	28477948	28479410	cassetteExon	0.5	100	100	ENSMUST00000124609.8	ENSMUSG00000096911.8	Gm2165	chrX	lncRNA	predicted gene 2165
chrX	28477948;28478851	28478688;28479410	+	28477948	28479410	cassetteExon	0.5	100	100	ENSMUST00000124609.8	ENSMUSG00000096911.8	Gm2165	chrX	lncRNA	predicted gene 2165
chrX	28446688	28477862	+	28462453	28477862	A5SS&ES	0.25	50	50	ENSMUST00000124609.8	ENSMUSG00000096911.8	Gm2165	chrX	lncRNA	predicted gene 2165
chrX	28477948	28478688	+	28477948	28478459	A3SS&ES	0.33	50	50	ENSMUST00000129963.8	ENSMUSG00000096911.8	Gm2165	chrX	lncRNA	predicted gene 2165
chrX	28446688	28477862	+	28446853	28477862	A5SS	0.25	50	50	ENSMUST00000129963.8	ENSMUSG00000096911.8	Gm2165	chrX	lncRNA	predicted gene 2165
chrX	28478491	28479410	+	28478737	28479410	A5SS	0.25	50	50	ENSMUST00000153493.8	ENSMUSG00000096911.8	Gm2165	chrX	lncRNA	predicted gene 2165
chrX	28478491	28479829	+	28479522	28479829	A5SS&ES	0.5	50	50	ENSMUST00000153493.8	ENSMUSG00000096911.8	Gm2165	chrX	lncRNA	predicted gene 2165
chrX	28478851	28479410	+	28478737	28479410	A5SS	0.25	50	50	ENSMUST00000153493.8	ENSMUSG00000096911.8	Gm2165	chrX	lncRNA	predicted gene 2165
chrX	28477948;28478491	28478459;28479829	+	28477948;28479522	28478688;28479829	MXE	0.5	100	100	ENSMUST00000137981.2	ENSMUSG00000096911.8	Gm2165	chrX	lncRNA	predicted gene 2165
chrX	29631875;29632294	29632182;29633213	-	29631875	29633213	cassetteExon	0.5	100	100	ENSMUST00000126712.8	ENSMUSG00000085489.8	Gm3669	chrX	lncRNA	predicted gene 3669
chrX	29631875;29632294	29632182;29633756	-	29631875;29633245	29633213;29633756	MXE	0.5	100	100	ENSMUST00000126712.8	ENSMUSG00000085489.8	Gm3669	chrX	lncRNA	predicted gene 3669
chrX	29633842;29649421	29649253;29664863	-	29633842	29664863	cassetteExon	0.5	100	100	ENSMUST00000126712.8	ENSMUSG00000085489.8	Gm3669	chrX	lncRNA	predicted gene 3669
chrX	29633016	29633756	-	29633245	29633756	A3SS&ES	0.33	50	50	ENSMUST00000126712.8	ENSMUSG00000085489.8	Gm3669	chrX	lncRNA	predicted gene 3669
chrX	29633842	29665028	-	29633842	29664863	A5SS	0.25	50	50	ENSMUST00000126712.8	ENSMUSG00000085489.8	Gm3669	chrX	lncRNA	predicted gene 3669
chrX	29633842	29665079	-	29633842	29664863	A5SS	0.25	50	50	ENSMUST00000126712.8	ENSMUSG00000085489.8	Gm3669	chrX	lncRNA	predicted gene 3669
chrX	29632294;29633016	29632853;29633756	-	29632294	29633756	cassetteExon	0.5	100	100	ENSMUST00000144018.8	ENSMUSG00000085489.8	Gm3669	chrX	lncRNA	predicted gene 3669
chrX	29632294;29633016	29632967;29633756	-	29632294	29633756	cassetteExon	0.5	100	100	ENSMUST00000144018.8	ENSMUSG00000085489.8	Gm3669	chrX	lncRNA	predicted gene 3669
chrX	29632294;29633245	29632853;29633756	-	29632294	29633756	cassetteExon	0.5	100	100	ENSMUST00000144018.8	ENSMUSG00000085489.8	Gm3669	chrX	lncRNA	predicted gene 3669
chrX	29632294;29633245	29632967;29633756	-	29632294	29633756	cassetteExon	0.5	100	100	ENSMUST00000144018.8	ENSMUSG00000085489.8	Gm3669	chrX	lncRNA	predicted gene 3669
chrX	29632294;29633245	29633213;29633756	-	29632294	29633756	cassetteExon	0.5	100	100	ENSMUST00000144018.8	ENSMUSG00000085489.8	Gm3669	chrX	lncRNA	predicted gene 3669
chrX	29633842	29665028	-	29633842	29649253	A5SS&ES	0.25	50	50	ENSMUST00000144018.8	ENSMUSG00000085489.8	Gm3669	chrX	lncRNA	predicted gene 3669
chrX	29633842	29665079	-	29633842	29649253	A5SS&ES	0.25	50	50	ENSMUST00000144018.8	ENSMUSG00000085489.8	Gm3669	chrX	lncRNA	predicted gene 3669
chrX	29631875;29633245	29633213;29633756	-	29631875;29633016	29632182;29633756	MXE	0.5	100	100	ENSMUST00000140946.8	ENSMUSG00000085489.8	Gm3669	chrX	lncRNA	predicted gene 3669
chrX	29632294;29633245	29633213;29633756	-	29632294;29633016	29632853;29633756	MXE	0.5	100	100	ENSMUST00000140946.8	ENSMUSG00000085489.8	Gm3669	chrX	lncRNA	predicted gene 3669
chrX	29632294	29632967	-	29632294	29632853	A5SS	0.25	50	50	ENSMUST00000140946.8	ENSMUSG00000085489.8	Gm3669	chrX	lncRNA	predicted gene 3669
chrX	29631875	29633213	-	29631875	29632182	A5SS&ES	0.5	50	50	ENSMUST00000133259.8	ENSMUSG00000085489.8	Gm3669	chrX	lncRNA	predicted gene 3669
chrX	29632294	29633213	-	29632294	29632967	A5SS	0.25	50	50	ENSMUST00000133259.8	ENSMUSG00000085489.8	Gm3669	chrX	lncRNA	predicted gene 3669
chrX	29633842	29665079	-	29633842	29665028	A5SS	0.25	50	50	ENSMUST00000133259.8	ENSMUSG00000085489.8	Gm3669	chrX	lncRNA	predicted gene 3669
chrX	29632294;29633016	29632967;29633756	-	29632294;29633245	29633213;29633756	MXE	0.5	100	100	ENSMUST00000127852.2	ENSMUSG00000085489.8	Gm3669	chrX	lncRNA	predicted gene 3669
chrX	30287112;30288063	30287785;30288574	-	30287112	30288574	cassetteExon	0.5	100	100	ENSMUST00000139112.8	ENSMUSG00000085325.8	Gm14974	chrX	lncRNA	predicted gene 14974
chrX	30288660	30320324	-	30288660	30320310	A5SS	0.5	50	50	ENSMUST00000139112.8	ENSMUSG00000085325.8	Gm14974	chrX	lncRNA	predicted gene 14974
chrX	30904892	30905558	+	30904892	30905371	A3SS	0.5	50	50	ENSMUST00000238350.2	ENSMUSG00000095754.3	Spin2f	chrX	protein_coding	spindlin family, member 2F
chrX	34239583	34241045	-	34239583;34240534	34240256;34241045	ES	0.5	50	50	ENSMUST00000146614.8	ENSMUSG00000087491.8	Gm14552	chrX	lncRNA	predicted gene 14552
chrX	34239583	34240502	-	34239583	34240256	A5SS	0.33	50	50	ENSMUST00000146614.8	ENSMUSG00000087491.8	Gm14552	chrX	lncRNA	predicted gene 14552
chrX	34241131	34256542	-	34241131	34272795	A5SS	0.33	50	50	ENSMUST00000146614.8	ENSMUSG00000087491.8	Gm14552	chrX	lncRNA	predicted gene 14552
chrX	34241131	34272846	-	34241131	34272795	A5SS	0.33	50	50	ENSMUST00000146614.8	ENSMUSG00000087491.8	Gm14552	chrX	lncRNA	predicted gene 14552
chrX	34239583;34240534	34240502;34241045	-	34239583	34241045	cassetteExon	0.5	100	100	ENSMUST00000126906.8	ENSMUSG00000087491.8	Gm14552	chrX	lncRNA	predicted gene 14552
chrX	34241131	34272846	-	34241131	34256542	A5SS&ES	0.33	50	50	ENSMUST00000126906.8	ENSMUSG00000087491.8	Gm14552	chrX	lncRNA	predicted gene 14552
chrX	35273103;35273634	35273596;35275285	+	35273103	35275285	cassetteExon	0.5	100	100	ENSMUST00000033419.13	ENSMUSG00000031093.15	Dock11	chrX	protein_coding	dedicator of cytokinesis 11
chrX	35333639;35339587	35339570;35339752	+	35333639	35339752	cassetteExon	0.5	100	100	ENSMUST00000033419.13	ENSMUSG00000031093.15	Dock11	chrX	protein_coding	dedicator of cytokinesis 11
chrX	35459665	35460165	+	35459665	35459757	A3SS&ES	0.5	50	50	ENSMUST00000115258.9	ENSMUSG00000036699.13	Zcchc12	chrX	protein_coding	zinc finger, CCHC domain containing 12
chrX	35598987;35603328	35603173;35605276	+	35598987	35605276	cassetteExon	0.5	100	100	ENSMUST00000135758.2	ENSMUSG00000016239.12	Lonrf3	chrX	protein_coding	LON peptidase N-terminal domain and ring finger 3
chrX	35687687	35693961	-	35687687	35692701	5pMXE	0.33	50	50	ENSMUST00000148691.2	ENSMUSG00000091556.9	Gm14569	chrX	protein_coding	predicted gene 14569
chrX	35687687	35689589	-	35687687	35692701	A5SS	0.33	50	50	ENSMUST00000148691.2	ENSMUSG00000091556.9	Gm14569	chrX	protein_coding	predicted gene 14569
chrX	35687687	35689589	-	35687687	35693961	A5SS	0.33	50	50	ENSMUST00000169499.2	ENSMUSG00000091556.9	Gm14569	chrX	protein_coding	predicted gene 14569
chrX	35882386	35900126	-	35882386;35887989	35887221;35900126	ES	0.5	50	50	ENSMUST00000051906.13	ENSMUSG00000059708.13	Akap17b	chrX	protein_coding	A kinase (PRKA) anchor protein 17B
chrX	35887989	35900126	-	35882386	35900126	A3SS	0.5	50	50	ENSMUST00000133980.2	ENSMUSG00000059708.13	Akap17b	chrX	protein_coding	A kinase (PRKA) anchor protein 17B
chrX	35882386	35887221	-	35882386	35900126	A5SS	0.5	50	50	ENSMUST00000133980.2	ENSMUSG00000059708.13	Akap17b	chrX	protein_coding	A kinase (PRKA) anchor protein 17B
chrX	36007671	36021421	+	36007671;36016027	36015786;36021421	ES	0.5	50	50	ENSMUST00000047655.7	ENSMUSG00000037636.7	Slc25a43	chrX	protein_coding	solute carrier family 25, member 43
chrX	36104270	36116292	-	36087822	36116292	A3SS	0.33	50	50	ENSMUST00000115249.10	ENSMUSG00000006423.16	C330007P06Rik	chrX	protein_coding	RIKEN cDNA C330007P06 gene
chrX	36114815	36116292	-	36087822	36116292	A3SS	0.33	50	50	ENSMUST00000115249.10	ENSMUSG00000006423.16	C330007P06Rik	chrX	protein_coding	RIKEN cDNA C330007P06 gene
chrX	36117072	36120470	-	36117072	36117936	A5SS&ES	0.5	50	50	ENSMUST00000115249.10	ENSMUSG00000006423.16	C330007P06Rik	chrX	protein_coding	RIKEN cDNA C330007P06 gene
chrX	36114815	36116292	-	36104270	36116292	A3SS	0.33	50	50	ENSMUST00000127966.8	ENSMUSG00000006423.16	C330007P06Rik	chrX	protein_coding	RIKEN cDNA C330007P06 gene
chrX	36114815	36116284	-	36114815	36116292	A5SS	0.5	50	50	ENSMUST00000115248.10	ENSMUSG00000006423.16	C330007P06Rik	chrX	protein_coding	RIKEN cDNA C330007P06 gene
chrX	36138845	36146252	+	36138845;36145399	36145310;36146252	ES	0.5	50	50	ENSMUST00000016452.11	ENSMUSG00000016308.13	Ube2a	chrX	protein_coding	ubiquitin-conjugating enzyme E2A
chrX	36145399	36146665	+	36145399;36146340	36146252;36146665	ES	0.5	50	50	ENSMUST00000016452.11	ENSMUSG00000016308.13	Ube2a	chrX	protein_coding	ubiquitin-conjugating enzyme E2A
chrX	36138182	36138371	+	36138182	36138364	A3SS	0.5	50	50	ENSMUST00000016452.11	ENSMUSG00000016308.13	Ube2a	chrX	protein_coding	ubiquitin-conjugating enzyme E2A
chrX	36145399	36146261	+	36145399	36146252	A3SS	0.33	50	50	ENSMUST00000016452.11	ENSMUSG00000016308.13	Ube2a	chrX	protein_coding	ubiquitin-conjugating enzyme E2A
chrX	36145399	36146665	+	36145399;36146340	36146261;36146665	ES	0.5	50	50	ENSMUST00000202991.4	ENSMUSG00000016308.13	Ube2a	chrX	protein_coding	ubiquitin-conjugating enzyme E2A
chrX	36138845	36146252	+	36138845	36145310	A3SS&ES	0.5	50	50	ENSMUST00000202991.4	ENSMUSG00000016308.13	Ube2a	chrX	protein_coding	ubiquitin-conjugating enzyme E2A
chrX	36138845;36145399	36145310;36146665	+	36138845;36146340	36146252;36146665	MXE	0.5	100	100	ENSMUST00000201068.4	ENSMUSG00000016308.13	Ube2a	chrX	protein_coding	ubiquitin-conjugating enzyme E2A
chrX	36138845	36146252	+	36145399	36146252	5pMXE	0.5	50	50	ENSMUST00000201050.2	ENSMUSG00000016308.13	Ube2a	chrX	protein_coding	ubiquitin-conjugating enzyme E2A
chrX	36179000	36186493	-	36176907	36186493	A3SS	0.33	50	50	ENSMUST00000060474.14	ENSMUSG00000050379.16	Septin6	chrX	protein_coding	septin 6
chrX	36184066	36186493	-	36176907	36186493	A3SS	0.33	50	50	ENSMUST00000060474.14	ENSMUSG00000050379.16	Septin6	chrX	protein_coding	septin 6
chrX	36179000	36186493	-	36184066	36186493	A3SS&ES	0.5	50	50	ENSMUST00000053456.11	ENSMUSG00000050379.16	Septin6	chrX	protein_coding	septin 6
chrX	36348669	36348778	-	36347741	36348778	A3SS	0.5	50	50	ENSMUST00000115231.4	ENSMUSG00000079641.4	Rpl39	chrX	protein_coding	ribosomal protein L39
chrX	36360671;36362757	36362719;36363160	-	36360671	36363160	cassetteExon	0.5	100	100	ENSMUST00000076265.13	ENSMUSG00000036572.17	Upf3b	chrX	protein_coding	UPF3 regulator of nonsense transcripts homolog B (yeast)
chrX	36360671	36363160	-	36362757	36363160	3pMXE	0.5	50	50	ENSMUST00000133481.2	ENSMUSG00000036572.17	Upf3b	chrX	protein_coding	UPF3 regulator of nonsense transcripts homolog B (yeast)
chrX	36510874;36511190	36511142;36513114	+	36510874	36513114	cassetteExon	0.5	100	100	ENSMUST00000063340.12	ENSMUSG00000051827.12	Rhox2a	chrX	protein_coding	reproductive homeobox 2A
chrX	36519331	36522401	+	36519331;36521253	36521208;36522401	ES	0.33	50	50	ENSMUST00000115203.10	ENSMUSG00000071772.14	Rhox3a	chrX	protein_coding	reproductive homeobox 3A
chrX	36519150	36522401	+	36521253	36522401	A5SS&ES	0.33	50	50	ENSMUST00000115203.10	ENSMUSG00000071772.14	Rhox3a	chrX	protein_coding	reproductive homeobox 3A
chrX	36519150	36522401	+	36519331	36522401	A5SS	0.33	50	50	ENSMUST00000185028.8	ENSMUSG00000071772.14	Rhox3a	chrX	protein_coding	reproductive homeobox 3A
chrX	36562841	36565911	+	36562841;36564763	36564718;36565911	ES	0.33	50	50	ENSMUST00000184565.8	ENSMUSG00000095601.9	Rhox3a2	chrX	protein_coding	reproductive homeobox 3A2
chrX	36562660	36565911	+	36564763	36565911	A5SS&ES	0.33	50	50	ENSMUST00000184565.8	ENSMUSG00000095601.9	Rhox3a2	chrX	protein_coding	reproductive homeobox 3A2
chrX	36562660	36565911	+	36562841	36565911	A5SS	0.33	50	50	ENSMUST00000183543.8	ENSMUSG00000095601.9	Rhox3a2	chrX	protein_coding	reproductive homeobox 3A2
chrX	36637554	36639803	+	36637554;36637871	36637823;36639803	ES	0.33	50	50	ENSMUST00000184688.8	ENSMUSG00000079637.11	Rhox2c	chrX	protein_coding	reproductive homeobox 2C
chrX	36635980	36639803	+	36635980;36637554	36637509;36639803	ES	0.33	50	50	ENSMUST00000115190.11	ENSMUSG00000079637.11	Rhox2c	chrX	protein_coding	reproductive homeobox 2C
chrX	36637554	36651177	+	36637554	36639803	3pMXE	0.33	50	50	ENSMUST00000115190.11	ENSMUSG00000079637.11	Rhox2c	chrX	protein_coding	reproductive homeobox 2C
chrX	36635980;36640299	36639803;36651177	+	36635980;36637554	36637509;36651177	MXE	0.5	100	100	ENSMUST00000173574.2	ENSMUSG00000079637.11	Rhox2c	chrX	protein_coding	reproductive homeobox 2C
chrX	36637554;36640299	36639803;36651177	+	36637554	36651177	cassetteExon	0.5	100	100	ENSMUST00000173574.2	ENSMUSG00000079637.11	Rhox2c	chrX	protein_coding	reproductive homeobox 2C
chrX	36637554	36637823	+	36637554	36651177	A3SS	0.33	50	50	ENSMUST00000173574.2	ENSMUSG00000079637.11	Rhox2c	chrX	protein_coding	reproductive homeobox 2C
chrX	36635980;36637871	36637509;36639803	+	36635980	36639803	cassetteExon	0.5	100	100	ENSMUST00000183655.2	ENSMUSG00000079637.11	Rhox2c	chrX	protein_coding	reproductive homeobox 2C
chrX	36637554	36651177	+	36640299	36651177	5pMXE	0.5	50	50	ENSMUST00000115188.9	ENSMUSG00000079636.12	Rhox3c	chrX	protein_coding	reproductive homeobox 3C
chrX	36652321	36655382	+	36652321;36654236	36654191;36655382	ES	0.33	50	50	ENSMUST00000115188.9	ENSMUSG00000079636.12	Rhox3c	chrX	protein_coding	reproductive homeobox 3C
chrX	36652140	36655382	+	36654236	36655382	A5SS&ES	0.33	50	50	ENSMUST00000115188.9	ENSMUSG00000079636.12	Rhox3c	chrX	protein_coding	reproductive homeobox 3C
chrX	36652140	36655382	+	36652321	36655382	A5SS	0.33	50	50	ENSMUST00000123851.8	ENSMUSG00000079636.12	Rhox3c	chrX	protein_coding	reproductive homeobox 3C
chrX	36720988;36721304	36721256;36723237	+	36720988	36723237	cassetteExon	0.5	100	100	ENSMUST00000072167.10	ENSMUSG00000096788.9	Rhox2e	chrX	protein_coding	reproductive homeobox 2E
chrX	36729428	36732500	+	36729428;36731351	36731306;36732500	ES	0.33	50	50	ENSMUST00000115198.10	ENSMUSG00000059626.14	Rhox3e	chrX	protein_coding	reproductive homeobox 3E
chrX	36729247	36732500	+	36731351	36732500	A5SS&ES	0.33	50	50	ENSMUST00000115198.10	ENSMUSG00000059626.14	Rhox3e	chrX	protein_coding	reproductive homeobox 3E
chrX	36729428	36732500	+	36729247	36732500	A5SS	0.33	50	50	ENSMUST00000184210.8	ENSMUSG00000059626.14	Rhox3e	chrX	protein_coding	reproductive homeobox 3E
chrX	36753742	36757587	+	36753742;36755333	36755288;36757587	ES	0.5	50	50	ENSMUST00000115173.5	ENSMUSG00000095741.4	Rhox2f	chrX	protein_coding	reproductive homeobox 2F
chrX	36763805	36766914	+	36763805;36765724	36765679;36766914	ES	0.33	50	50	ENSMUST00000184451.8	ENSMUSG00000095510.9	Rhox3f	chrX	protein_coding	reproductive homeobox 3F
chrX	36763624	36766914	+	36765724	36766914	A5SS&ES	0.33	50	50	ENSMUST00000184451.8	ENSMUSG00000095510.9	Rhox3f	chrX	protein_coding	reproductive homeobox 3F
chrX	36763805	36766914	+	36763624	36766914	A5SS	0.33	50	50	ENSMUST00000185008.8	ENSMUSG00000095510.9	Rhox3f	chrX	protein_coding	reproductive homeobox 3F
chrX	36820995;36822855	36822810;36824439	-	36820995	36824439	cassetteExon	0.5	100	100	ENSMUST00000183888.3	ENSMUSG00000079629.6	Rhox2g	chrX	protein_coding	reproductive homeobox 2G
chrX	36839576	36840726	-	36839576	36842825	A5SS	0.33	50	50	ENSMUST00000184824.7	ENSMUSG00000071769.12	Rhox3h	chrX	protein_coding	reproductive homeobox 3H
chrX	36839576	36842644	-	36839576	36842825	A5SS	0.33	50	50	ENSMUST00000184824.7	ENSMUSG00000071769.12	Rhox3h	chrX	protein_coding	reproductive homeobox 3H
chrX	36839576;36840771	36840726;36842644	-	36839576	36842644	cassetteExon	0.5	100	100	ENSMUST00000185138.8	ENSMUSG00000071769.12	Rhox3h	chrX	protein_coding	reproductive homeobox 3H
chrX	36850875;36852718	36852673;36854262	-	36850875	36854262	cassetteExon	0.5	100	100	ENSMUST00000184088.2	ENSMUSG00000079627.3	Rhox2h	chrX	protein_coding	reproductive homeobox 2H
chrX	36891895	36892584	+	36891706	36892584	A5SS	0.33	50	50	ENSMUST00000184866.10	ENSMUSG00000095180.11	Rhox5	chrX	protein_coding	reproductive homeobox 5
chrX	36892365	36892584	+	36891706	36892584	A5SS	0.33	50	50	ENSMUST00000184866.10	ENSMUSG00000095180.11	Rhox5	chrX	protein_coding	reproductive homeobox 5
chrX	36892365	36892584	+	36891895	36892584	A5SS	0.33	50	50	ENSMUST00000179626.3	ENSMUSG00000095180.11	Rhox5	chrX	protein_coding	reproductive homeobox 5
chrX	36926870	36928869	+	36928245	36928869	A5SS&ES	0.5	50	50	ENSMUST00000096454.2	ENSMUSG00000071767.5	Rhox7a	chrX	protein_coding	reproductive homeobox 7A
chrX	37194611	37196005	-	37193150	37196005	A3SS	0.5	50	50	ENSMUST00000096453.12	ENSMUSG00000071766.13	Rhox12	chrX	protein_coding	reproductive homeobox 12
chrX	37278785	37281092	+	37278959	37281092	A5SS	0.5	50	50	ENSMUST00000049740.3	ENSMUSG00000048047.4	Zbtb33	chrX	protein_coding	zinc finger and BTB domain containing 33
chrX	37314002	37321980	-	37314002;37315833	37315765;37321980	ES	0.33	50	50	ENSMUST00000089056.10	ENSMUSG00000036502.15	Tmem255a	chrX	protein_coding	transmembrane protein 255A
chrX	37288533	37296887	-	37286175	37296887	A3SS	0.5	50	50	ENSMUST00000089056.10	ENSMUSG00000036502.15	Tmem255a	chrX	protein_coding	transmembrane protein 255A
chrX	37313546	37321980	-	37313546;37314002	37313931;37321980	ES	0.33	50	50	ENSMUST00000089054.11	ENSMUSG00000036502.15	Tmem255a	chrX	protein_coding	transmembrane protein 255A
chrX	37313546	37321980	-	37314002	37321980	A3SS	0.33	50	50	ENSMUST00000155848.8	ENSMUSG00000036502.15	Tmem255a	chrX	protein_coding	transmembrane protein 255A
chrX	37315833	37321980	-	37313546	37321980	A3SS	0.33	50	50	ENSMUST00000139358.2	ENSMUSG00000036502.15	Tmem255a	chrX	protein_coding	transmembrane protein 255A
chrX	37409637	37413522	+	37409649	37413522	A5SS	0.5	50	50	ENSMUST00000016471.9	ENSMUSG00000016327.10	Atp1b4	chrX	protein_coding	ATPase, (Na+)/K+ transporting, beta 4 polypeptide
chrX	37494448	37513144	-	37491158	37513144	A3SS	0.33	50	50	ENSMUST00000074913.12	ENSMUSG00000016534.16	Lamp2	chrX	protein_coding	lysosomal-associated membrane protein 2
chrX	37510728	37513144	-	37491158	37513144	A3SS	0.33	50	50	ENSMUST00000074913.12	ENSMUSG00000016534.16	Lamp2	chrX	protein_coding	lysosomal-associated membrane protein 2
chrX	37544233	37545126	-	37531017	37545126	A3SS	0.5	50	50	ENSMUST00000074913.12	ENSMUSG00000016534.16	Lamp2	chrX	protein_coding	lysosomal-associated membrane protein 2
chrX	37510728	37513144	-	37494448	37513144	A3SS	0.33	50	50	ENSMUST00000016678.14	ENSMUSG00000016534.16	Lamp2	chrX	protein_coding	lysosomal-associated membrane protein 2
chrX	37629927	37632209	-	37629927;37631035	37630928;37632209	ES	0.5	50	50	ENSMUST00000016681.15	ENSMUSG00000031095.16	Cul4b	chrX	protein_coding	cullin 4B
chrX	37634493	37635569	-	37634477	37635569	A3SS	0.5	50	50	ENSMUST00000016681.15	ENSMUSG00000031095.16	Cul4b	chrX	protein_coding	cullin 4B
chrX	37661355	37664957	-	37661355	37665016	A5SS	0.5	50	50	ENSMUST00000115118.8	ENSMUSG00000031095.16	Cul4b	chrX	protein_coding	cullin 4B
chrX	37689655;37690958	37690806;37691453	+	37689655	37691453	cassetteExon	0.5	100	100	ENSMUST00000140204.8	ENSMUSG00000000355.14	Mcts1	chrX	protein_coding	malignant T cell amplified sequence 1
chrX	37690274	37690806	+	37689655	37690806	A5SS	0.5	50	50	ENSMUST00000000365.3	ENSMUSG00000000355.14	Mcts1	chrX	protein_coding	malignant T cell amplified sequence 1
chrX	37698854	37700632	+	37697745	37700632	A5SS	0.5	50	50	ENSMUST00000133128.8	ENSMUSG00000000355.14	Mcts1	chrX	protein_coding	malignant T cell amplified sequence 1
chrX	40743130;40758492	40758378;40761096	+	40743130;40743801	40743687;40761096	MXE	0.5	100	100	ENSMUST00000115103.9	ENSMUSG00000001986.17	Gria3	chrX	protein_coding	glutamate receptor, ionotropic, AMPA3 (alpha 3)
chrX	40743801;40758492	40758378;40761096	+	40743801	40761096	cassetteExon	0.5	100	100	ENSMUST00000115103.9	ENSMUSG00000001986.17	Gria3	chrX	protein_coding	glutamate receptor, ionotropic, AMPA3 (alpha 3)
chrX	40743130;40743801	40743687;40758378	+	40743130	40758378	cassetteExon	0.5	100	100	ENSMUST00000076349.12	ENSMUSG00000001986.17	Gria3	chrX	protein_coding	glutamate receptor, ionotropic, AMPA3 (alpha 3)
chrX	40891299	40891824	-	40886656	40891824	A3SS	0.5	50	50	ENSMUST00000124458.8	ENSMUSG00000037475.16	Thoc2	chrX	protein_coding	THO complex 2
chrX	40891863	40892333	-	40891869	40892333	A3SS	0.5	50	50	ENSMUST00000124458.8	ENSMUSG00000037475.16	Thoc2	chrX	protein_coding	THO complex 2
chrX	40901371	40902827	-	40901452	40902827	A3SS	0.5	50	50	ENSMUST00000124458.8	ENSMUSG00000037475.16	Thoc2	chrX	protein_coding	THO complex 2
chrX	40986727	41006806	-	40986727	41000678	5pMXE	0.5	50	50	ENSMUST00000047037.15	ENSMUSG00000037475.16	Thoc2	chrX	protein_coding	THO complex 2
chrX	40903443	40933641	-	40933232	40933641	A3SS&ES	0.5	50	50	ENSMUST00000047037.15	ENSMUSG00000037475.16	Thoc2	chrX	protein_coding	THO complex 2
chrX	40961556	40962759	-	40961563	40962759	A3SS	0.5	50	50	ENSMUST00000047037.15	ENSMUSG00000037475.16	Thoc2	chrX	protein_coding	THO complex 2
chrX	40901371	40902107	-	40901371	40902827	A5SS	0.33	50	50	ENSMUST00000047037.15	ENSMUSG00000037475.16	Thoc2	chrX	protein_coding	THO complex 2
chrX	40901371	40902294	-	40901371	40902827	A5SS	0.33	50	50	ENSMUST00000047037.15	ENSMUSG00000037475.16	Thoc2	chrX	protein_coding	THO complex 2
chrX	40968814	40970782	-	40968814	40970786	A5SS	0.5	50	50	ENSMUST00000047037.15	ENSMUSG00000037475.16	Thoc2	chrX	protein_coding	THO complex 2
chrX	40901371	40902107	-	40901371	40902294	A5SS	0.33	50	50	ENSMUST00000151430.8	ENSMUSG00000037475.16	Thoc2	chrX	protein_coding	THO complex 2
chrX	41157359	41183244	+	41157359	41160119	3pMXE	0.33	50	50	ENSMUST00000141316.8	ENSMUSG00000025860.16	Xiap	chrX	protein_coding	X-linked inhibitor of apoptosis
chrX	41157359	41183249	+	41157359	41160119	3pMXE	0.33	50	50	ENSMUST00000141316.8	ENSMUSG00000025860.16	Xiap	chrX	protein_coding	X-linked inhibitor of apoptosis
chrX	41148909	41155558	+	41148728	41155558	A5SS	0.33	50	50	ENSMUST00000141316.8	ENSMUSG00000025860.16	Xiap	chrX	protein_coding	X-linked inhibitor of apoptosis
chrX	41149364	41155558	+	41148728	41155558	A5SS	0.33	50	50	ENSMUST00000141316.8	ENSMUSG00000025860.16	Xiap	chrX	protein_coding	X-linked inhibitor of apoptosis
chrX	41156933	41157234	+	41155679	41157234	A5SS	0.5	50	50	ENSMUST00000141316.8	ENSMUSG00000025860.16	Xiap	chrX	protein_coding	X-linked inhibitor of apoptosis
chrX	41149364	41155558	+	41148909	41155558	A5SS	0.33	50	50	ENSMUST00000225851.2	ENSMUSG00000025860.16	Xiap	chrX	protein_coding	X-linked inhibitor of apoptosis
chrX	41157359;41160380	41160119;41183244	+	41157359	41183244	cassetteExon	0.5	100	100	ENSMUST00000224454.2	ENSMUSG00000025860.16	Xiap	chrX	protein_coding	X-linked inhibitor of apoptosis
chrX	41157359	41183249	+	41157359	41183244	A3SS	0.33	50	50	ENSMUST00000224454.2	ENSMUSG00000025860.16	Xiap	chrX	protein_coding	X-linked inhibitor of apoptosis
chrX	41157749	41183244	+	41157359	41183244	A5SS	0.33	50	50	ENSMUST00000224454.2	ENSMUSG00000025860.16	Xiap	chrX	protein_coding	X-linked inhibitor of apoptosis
chrX	41157749	41185490	+	41184149	41185490	A5SS&ES	0.33	50	50	ENSMUST00000115094.8	ENSMUSG00000025860.16	Xiap	chrX	protein_coding	X-linked inhibitor of apoptosis
chrX	41156933	41157234	+	41156933	41185490	A3SS	0.5	50	50	ENSMUST00000150635.8	ENSMUSG00000025860.16	Xiap	chrX	protein_coding	X-linked inhibitor of apoptosis
chrX	41157749	41185490	+	41156933	41185490	A5SS	0.33	50	50	ENSMUST00000150635.8	ENSMUSG00000025860.16	Xiap	chrX	protein_coding	X-linked inhibitor of apoptosis
chrX	41184149	41185490	+	41156933	41185490	A5SS	0.33	50	50	ENSMUST00000150635.8	ENSMUSG00000025860.16	Xiap	chrX	protein_coding	X-linked inhibitor of apoptosis
chrX	41157749	41185490	+	41157749;41184149	41183244;41185490	ES	0.5	50	50	ENSMUST00000115095.9	ENSMUSG00000025860.16	Xiap	chrX	protein_coding	X-linked inhibitor of apoptosis
chrX	41160380	41183244	+	41157749	41183244	A5SS	0.33	50	50	ENSMUST00000115095.9	ENSMUSG00000025860.16	Xiap	chrX	protein_coding	X-linked inhibitor of apoptosis
chrX	41160380	41183244	+	41160380	41161351	3pMXE	0.5	50	50	ENSMUST00000146874.3	ENSMUSG00000025860.16	Xiap	chrX	protein_coding	X-linked inhibitor of apoptosis
chrX	41157749	41183244	+	41157749	41185490	A3SS	0.5	50	50	ENSMUST00000145065.2	ENSMUSG00000025860.16	Xiap	chrX	protein_coding	X-linked inhibitor of apoptosis
chrX	41157359	41183244	+	41160380	41183244	5pMXE	0.33	50	50	ENSMUST00000055483.10	ENSMUSG00000025860.16	Xiap	chrX	protein_coding	X-linked inhibitor of apoptosis
chrX	41355152	41358258	+	41355152;41355353	41355243;41358258	ES	0.5	50	50	ENSMUST00000115073.9	ENSMUSG00000025862.15	Stag2	chrX	protein_coding	stromal antigen 2
chrX	41238638	41290732	+	41238562	41290732	A5SS	0.16	50	50	ENSMUST00000115073.9	ENSMUSG00000025862.15	Stag2	chrX	protein_coding	stromal antigen 2
chrX	41239168	41290732	+	41238562	41290732	A5SS	0.16	50	50	ENSMUST00000115073.9	ENSMUSG00000025862.15	Stag2	chrX	protein_coding	stromal antigen 2
chrX	41239711	41290732	+	41238562	41290732	A5SS	0.16	50	50	ENSMUST00000115073.9	ENSMUSG00000025862.15	Stag2	chrX	protein_coding	stromal antigen 2
chrX	41239965	41290732	+	41238562	41290732	A5SS	0.16	50	50	ENSMUST00000115073.9	ENSMUSG00000025862.15	Stag2	chrX	protein_coding	stromal antigen 2
chrX	41241297	41290732	+	41238562	41290732	A5SS	0.16	50	50	ENSMUST00000115073.9	ENSMUSG00000025862.15	Stag2	chrX	protein_coding	stromal antigen 2
chrX	41239168	41290732	+	41238638	41290732	A5SS	0.16	50	50	ENSMUST00000127618.8	ENSMUSG00000025862.15	Stag2	chrX	protein_coding	stromal antigen 2
chrX	41239711	41290732	+	41238638	41290732	A5SS	0.16	50	50	ENSMUST00000127618.8	ENSMUSG00000025862.15	Stag2	chrX	protein_coding	stromal antigen 2
chrX	41239965	41290732	+	41238638	41290732	A5SS	0.16	50	50	ENSMUST00000127618.8	ENSMUSG00000025862.15	Stag2	chrX	protein_coding	stromal antigen 2
chrX	41241297	41290732	+	41238638	41290732	A5SS	0.16	50	50	ENSMUST00000127618.8	ENSMUSG00000025862.15	Stag2	chrX	protein_coding	stromal antigen 2
chrX	41239711	41290732	+	41239168	41290732	A5SS	0.16	50	50	ENSMUST00000141414.2	ENSMUSG00000025862.15	Stag2	chrX	protein_coding	stromal antigen 2
chrX	41239965	41290732	+	41239168	41290732	A5SS	0.16	50	50	ENSMUST00000141414.2	ENSMUSG00000025862.15	Stag2	chrX	protein_coding	stromal antigen 2
chrX	41241297	41290732	+	41239168	41290732	A5SS	0.16	50	50	ENSMUST00000141414.2	ENSMUSG00000025862.15	Stag2	chrX	protein_coding	stromal antigen 2
chrX	41239965	41290732	+	41239711	41290732	A5SS	0.16	50	50	ENSMUST00000069619.14	ENSMUSG00000025862.15	Stag2	chrX	protein_coding	stromal antigen 2
chrX	41241297	41290732	+	41239711	41290732	A5SS	0.16	50	50	ENSMUST00000069619.14	ENSMUSG00000025862.15	Stag2	chrX	protein_coding	stromal antigen 2
chrX	41241297	41290732	+	41239965	41290732	A5SS	0.16	50	50	ENSMUST00000123245.8	ENSMUSG00000025862.15	Stag2	chrX	protein_coding	stromal antigen 2
chrX	41591727	41604164	+	41591409	41604164	A5SS	0.25	50	50	ENSMUST00000129855.8	ENSMUSG00000005696.12	Sh2d1a	chrX	protein_coding	SH2 domain containing 1A
chrX	41591736	41604164	+	41591409	41604164	A5SS	0.25	50	50	ENSMUST00000129855.8	ENSMUSG00000005696.12	Sh2d1a	chrX	protein_coding	SH2 domain containing 1A
chrX	41591736	41609520	+	41604227	41609520	A5SS&ES	0.5	50	50	ENSMUST00000129855.8	ENSMUSG00000005696.12	Sh2d1a	chrX	protein_coding	SH2 domain containing 1A
chrX	41603352	41604164	+	41591409	41604164	A5SS	0.25	50	50	ENSMUST00000129855.8	ENSMUSG00000005696.12	Sh2d1a	chrX	protein_coding	SH2 domain containing 1A
chrX	41591736	41609520	+	41591736;41604227	41604164;41609520	ES	0.5	50	50	ENSMUST00000189753.7	ENSMUSG00000005696.12	Sh2d1a	chrX	protein_coding	SH2 domain containing 1A
chrX	41591727	41604164	+	41591736	41604164	A5SS	0.25	50	50	ENSMUST00000189753.7	ENSMUSG00000005696.12	Sh2d1a	chrX	protein_coding	SH2 domain containing 1A
chrX	41603352	41604164	+	41591736	41604164	A5SS	0.25	50	50	ENSMUST00000189753.7	ENSMUSG00000005696.12	Sh2d1a	chrX	protein_coding	SH2 domain containing 1A
chrX	41603352	41604164	+	41591727	41604164	A5SS	0.25	50	50	ENSMUST00000115070.8	ENSMUSG00000005696.12	Sh2d1a	chrX	protein_coding	SH2 domain containing 1A
chrX	41731685;41737291	41737271;41746334	-	41731685	41746334	cassetteExon	0.5	100	100	ENSMUST00000115058.8	ENSMUSG00000016150.16	Tenm1	chrX	protein_coding	teneurin transmembrane protein 1
chrX	41938052	41988565	-	41938055	41988565	A3SS	0.5	50	50	ENSMUST00000115058.8	ENSMUSG00000016150.16	Tenm1	chrX	protein_coding	teneurin transmembrane protein 1
chrX	42413205	42499576	-	42256719	42499576	A3SS	0.5	50	50	ENSMUST00000154433.8	ENSMUSG00000016150.16	Tenm1	chrX	protein_coding	teneurin transmembrane protein 1
chrX	43877170	43877290	-	43877170	43877268	A5SS	0.5	50	50	ENSMUST00000115056.2	ENSMUSG00000045284.10	Dcaf12l1	chrX	protein_coding	DDB1 and CUL4 associated factor 12-like 1
chrX	46943595;46944490	46944455;46947133	-	46943595	46947133	cassetteExon	0.5	100	100	ENSMUST00000077569.11	ENSMUSG00000031099.17	Smarca1	chrX	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
chrX	46978758	46981103	-	46976075	46981103	A3SS	0.5	50	50	ENSMUST00000077569.11	ENSMUSG00000031099.17	Smarca1	chrX	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
chrX	46898997	46900035	-	46898997	46900004	A5SS	0.5	50	50	ENSMUST00000077569.11	ENSMUSG00000031099.17	Smarca1	chrX	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
chrX	46973080	46975989	-	46973080	46975974	A5SS	0.5	50	50	ENSMUST00000077569.11	ENSMUSG00000031099.17	Smarca1	chrX	protein_coding	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
chrX	47001925	47009038	+	47001925;47005431	47005352;47009038	ES	0.5	50	50	ENSMUST00000001202.15	ENSMUSG00000001173.16	Ocrl	chrX	protein_coding	OCRL, inositol polyphosphate-5-phosphatase
chrX	47035990	47037002	+	47035990;47036749	47036584;47037002	ES	0.5	50	50	ENSMUST00000001202.15	ENSMUSG00000001173.16	Ocrl	chrX	protein_coding	OCRL, inositol polyphosphate-5-phosphatase
chrX	47032518;47033490	47033344;47035880	+	47032518	47035880	cassetteExon	0.5	100	100	ENSMUST00000001202.15	ENSMUSG00000001173.16	Ocrl	chrX	protein_coding	OCRL, inositol polyphosphate-5-phosphatase
chrX	47200675	47201000	+	47200675	47202554	A3SS	0.5	50	50	ENSMUST00000077775.11	ENSMUSG00000037005.17	Xpnpep2	chrX	protein_coding	X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound
chrX	47220851	47221853	+	47220851	47223962	A3SS	0.5	50	50	ENSMUST00000077775.11	ENSMUSG00000037005.17	Xpnpep2	chrX	protein_coding	X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound
chrX	47210980	47211406	+	47210779	47211406	A5SS	0.5	50	50	ENSMUST00000077775.11	ENSMUSG00000037005.17	Xpnpep2	chrX	protein_coding	X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound
chrX	47216717	47217602	+	47215817	47217602	A5SS	0.5	50	50	ENSMUST00000077775.11	ENSMUSG00000037005.17	Xpnpep2	chrX	protein_coding	X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound
chrX	47295834	47297715	-	47295834	47297357	5pMXE	0.25	50	50	ENSMUST00000037960.11	ENSMUSG00000036985.13	Zdhhc9	chrX	protein_coding	zinc finger, DHHC domain containing 9
chrX	47295834;47296796	47296400;47297357	-	47295834	47297357	cassetteExon	0.5	100	100	ENSMUST00000037960.11	ENSMUSG00000036985.13	Zdhhc9	chrX	protein_coding	zinc finger, DHHC domain containing 9
chrX	47291212	47295545	-	47283597	47295545	A3SS	0.5	50	50	ENSMUST00000037960.11	ENSMUSG00000036985.13	Zdhhc9	chrX	protein_coding	zinc finger, DHHC domain containing 9
chrX	47295834	47297000	-	47295834	47297357	A5SS	0.25	50	50	ENSMUST00000037960.11	ENSMUSG00000036985.13	Zdhhc9	chrX	protein_coding	zinc finger, DHHC domain containing 9
chrX	47295834	47296400	-	47295834	47297715	A5SS	0.25	50	50	ENSMUST00000088935.4	ENSMUSG00000036985.13	Zdhhc9	chrX	protein_coding	zinc finger, DHHC domain containing 9
chrX	47295834	47297000	-	47295834	47297715	A5SS	0.25	50	50	ENSMUST00000088935.4	ENSMUSG00000036985.13	Zdhhc9	chrX	protein_coding	zinc finger, DHHC domain containing 9
chrX	47295834	47296400	-	47295834	47297000	A5SS	0.25	50	50	ENSMUST00000132652.8	ENSMUSG00000036985.13	Zdhhc9	chrX	protein_coding	zinc finger, DHHC domain containing 9
chrX	47352509;47357798	47357731;47361677	+	47352509	47361677	cassetteExon	0.5	100	100	ENSMUST00000080713.5	ENSMUSG00000063785.13	Utp14a	chrX	protein_coding	UTP14A small subunit processome component
chrX	47352509	47355292	+	47352509	47361677	A3SS	0.33	50	50	ENSMUST00000080713.5	ENSMUSG00000063785.13	Utp14a	chrX	protein_coding	UTP14A small subunit processome component
chrX	47352509	47357731	+	47352509	47355292	3pMXE	0.33	50	50	ENSMUST00000125966.8	ENSMUSG00000063785.13	Utp14a	chrX	protein_coding	UTP14A small subunit processome component
chrX	47465954	47472799	+	47465954;47468207	47467821;47472799	ES	0.5	50	50	ENSMUST00000136348.8	ENSMUSG00000036959.16	Bcorl1	chrX	protein_coding	BCL6 co-repressor-like 1
chrX	47473022	47480748	+	47473022;47478174	47477953;47480748	ES	0.5	50	50	ENSMUST00000136348.8	ENSMUSG00000036959.16	Bcorl1	chrX	protein_coding	BCL6 co-repressor-like 1
chrX	47431126	47431678	+	47430360	47431678	A5SS	0.5	50	50	ENSMUST00000136348.8	ENSMUSG00000036959.16	Bcorl1	chrX	protein_coding	BCL6 co-repressor-like 1
chrX	47432766	47450410	+	47431757	47450410	A5SS	0.5	50	50	ENSMUST00000136348.8	ENSMUSG00000036959.16	Bcorl1	chrX	protein_coding	BCL6 co-repressor-like 1
chrX	47465954	47472799	+	47465954	47467821	3pMXE	0.5	50	50	ENSMUST00000156042.2	ENSMUSG00000036959.16	Bcorl1	chrX	protein_coding	BCL6 co-repressor-like 1
chrX	47450539	47456296	+	47450539	47463900	A3SS	0.5	50	50	ENSMUST00000156042.2	ENSMUSG00000036959.16	Bcorl1	chrX	protein_coding	BCL6 co-repressor-like 1
chrX	47459909	47463900	+	47450539	47463900	A5SS	0.5	50	50	ENSMUST00000156042.2	ENSMUSG00000036959.16	Bcorl1	chrX	protein_coding	BCL6 co-repressor-like 1
chrX	47513231	47551950	-	47513231	47542749	5pMXE	0.5	50	50	ENSMUST00000114958.8	ENSMUSG00000031103.13	Elf4	chrX	protein_coding	E74-like factor 4 (ets domain transcription factor)
chrX	47588748;47592590	47592460;47602113	-	47588748;47593829	47593687;47602113	MXE	0.5	100	100	ENSMUST00000143466.8	ENSMUSG00000036932.15	Aifm1	chrX	protein_coding	apoptosis-inducing factor, mitochondrion-associated 1
chrX	47632318	47636142	-	47632318;47632580	47632462;47636142	ES	0.5	50	50	ENSMUST00000076635.13	ENSMUSG00000036916.14	Zfp280c	chrX	protein_coding	zinc finger protein 280C
chrX	47667406	47677580	-	47667433	47677580	A3SS	0.33	50	50	ENSMUST00000076635.13	ENSMUSG00000036916.14	Zfp280c	chrX	protein_coding	zinc finger protein 280C
chrX	47675447	47677580	-	47667433	47677580	A3SS	0.33	50	50	ENSMUST00000076635.13	ENSMUSG00000036916.14	Zfp280c	chrX	protein_coding	zinc finger protein 280C
chrX	47680638	47682391	-	47680638	47683210	A5SS	0.33	50	50	ENSMUST00000088898.11	ENSMUSG00000036916.14	Zfp280c	chrX	protein_coding	zinc finger protein 280C
chrX	47680638	47683241	-	47680638	47683210	A5SS	0.33	50	50	ENSMUST00000088898.11	ENSMUSG00000036916.14	Zfp280c	chrX	protein_coding	zinc finger protein 280C
chrX	47680638;47682475	47682391;47683241	-	47680638	47683241	cassetteExon	0.5	100	100	ENSMUST00000072292.12	ENSMUSG00000036916.14	Zfp280c	chrX	protein_coding	zinc finger protein 280C
chrX	47675447	47677580	-	47667406	47677580	A3SS	0.33	50	50	ENSMUST00000072292.12	ENSMUSG00000036916.14	Zfp280c	chrX	protein_coding	zinc finger protein 280C
chrX	47712705	47718129	+	47712705;47713083	47712839;47718129	ES	0.2	50	50	ENSMUST00000128773.8	ENSMUSG00000031105.17	Slc25a14	chrX	protein_coding	solute carrier family 25 (mitochondrial carrier, brain), member 14
chrX	47713083;47714517	47714473;47718129	+	47713083	47718129	cassetteExon	0.5	100	100	ENSMUST00000128773.8	ENSMUSG00000031105.17	Slc25a14	chrX	protein_coding	solute carrier family 25 (mitochondrial carrier, brain), member 14
chrX	47713074	47718129	+	47713083	47718129	A5SS	0.2	50	50	ENSMUST00000128773.8	ENSMUSG00000031105.17	Slc25a14	chrX	protein_coding	solute carrier family 25 (mitochondrial carrier, brain), member 14
chrX	47717060	47718129	+	47713083	47718129	A5SS	0.2	50	50	ENSMUST00000128773.8	ENSMUSG00000031105.17	Slc25a14	chrX	protein_coding	solute carrier family 25 (mitochondrial carrier, brain), member 14
chrX	47712705	47718129	+	47712705;47713074	47712839;47718129	ES	0.2	50	50	ENSMUST00000033431.14	ENSMUSG00000031105.17	Slc25a14	chrX	protein_coding	solute carrier family 25 (mitochondrial carrier, brain), member 14
chrX	47713074;47714517	47714473;47718129	+	47713074	47718129	cassetteExon	0.5	100	100	ENSMUST00000033431.14	ENSMUSG00000031105.17	Slc25a14	chrX	protein_coding	solute carrier family 25 (mitochondrial carrier, brain), member 14
chrX	47717060	47718129	+	47713074	47718129	A5SS	0.2	50	50	ENSMUST00000033431.14	ENSMUSG00000031105.17	Slc25a14	chrX	protein_coding	solute carrier family 25 (mitochondrial carrier, brain), member 14
chrX	47714517;47717060	47717013;47718129	+	47714517	47718129	cassetteExon	0.5	100	100	ENSMUST00000134257.8	ENSMUSG00000031105.17	Slc25a14	chrX	protein_coding	solute carrier family 25 (mitochondrial carrier, brain), member 14
chrX	47713083	47714473	+	47713074	47714473	A5SS	0.5	50	50	ENSMUST00000134257.8	ENSMUSG00000031105.17	Slc25a14	chrX	protein_coding	solute carrier family 25 (mitochondrial carrier, brain), member 14
chrX	47713083	47718129	+	47714517	47718129	A5SS&ES	0.2	50	50	ENSMUST00000134257.8	ENSMUSG00000031105.17	Slc25a14	chrX	protein_coding	solute carrier family 25 (mitochondrial carrier, brain), member 14
chrX	47714517	47718129	+	47712705	47718129	A5SS	0.2	50	50	ENSMUST00000153047.8	ENSMUSG00000031105.17	Slc25a14	chrX	protein_coding	solute carrier family 25 (mitochondrial carrier, brain), member 14
chrX	47717060	47718129	+	47712705	47718129	A5SS	0.2	50	50	ENSMUST00000153047.8	ENSMUSG00000031105.17	Slc25a14	chrX	protein_coding	solute carrier family 25 (mitochondrial carrier, brain), member 14
chrX	47712705	47718129	+	47713083	47718129	5pMXE	0.2	50	50	ENSMUST00000177710.2	ENSMUSG00000031105.17	Slc25a14	chrX	protein_coding	solute carrier family 25 (mitochondrial carrier, brain), member 14
chrX	48100511	48102374	-	48100511;48102057	48102010;48102374	ES	0.5	50	50	ENSMUST00000167659.8	ENSMUSG00000031109.17	Enox2	chrX	protein_coding	ecto-NOX disulfide-thiol exchanger 2
chrX	48154677	48158512	-	48151226	48158512	A3SS	0.5	50	50	ENSMUST00000167659.8	ENSMUSG00000031109.17	Enox2	chrX	protein_coding	ecto-NOX disulfide-thiol exchanger 2
chrX	48107771	48112004	-	48107771	48111971	A5SS	0.5	50	50	ENSMUST00000167659.8	ENSMUSG00000031109.17	Enox2	chrX	protein_coding	ecto-NOX disulfide-thiol exchanger 2
chrX	48257661	48376978	-	48257661;48375781	48375733;48376978	ES	0.5	50	50	ENSMUST00000114914.8	ENSMUSG00000031109.17	Enox2	chrX	protein_coding	ecto-NOX disulfide-thiol exchanger 2
chrX	48169628	48375722	-	48169628	48257518	A5SS&ES	0.5	50	50	ENSMUST00000114914.8	ENSMUSG00000031109.17	Enox2	chrX	protein_coding	ecto-NOX disulfide-thiol exchanger 2
chrX	48257661	48375722	-	48257661	48375733	A5SS	0.33	50	50	ENSMUST00000114914.8	ENSMUSG00000031109.17	Enox2	chrX	protein_coding	ecto-NOX disulfide-thiol exchanger 2
chrX	48375781	48377034	-	48375781	48376978	A5SS	0.5	50	50	ENSMUST00000114914.8	ENSMUSG00000031109.17	Enox2	chrX	protein_coding	ecto-NOX disulfide-thiol exchanger 2
chrX	48169628	48375722	-	48169628;48257661	48257518;48375722	ES	0.5	50	50	ENSMUST00000114918.9	ENSMUSG00000031109.17	Enox2	chrX	protein_coding	ecto-NOX disulfide-thiol exchanger 2
chrX	48257661	48376978	-	48257661;48375781	48375722;48376978	ES	0.5	50	50	ENSMUST00000114918.9	ENSMUSG00000031109.17	Enox2	chrX	protein_coding	ecto-NOX disulfide-thiol exchanger 2
chrX	48257661	48376978	-	48257661	48375722	A5SS&ES	0.33	50	50	ENSMUST00000033437.15	ENSMUSG00000031109.17	Enox2	chrX	protein_coding	ecto-NOX disulfide-thiol exchanger 2
chrX	48169628;48257661	48257518;48376978	-	48169628;48375781	48375722;48376978	MXE	0.5	100	100	ENSMUST00000155770.8	ENSMUSG00000031109.17	Enox2	chrX	protein_coding	ecto-NOX disulfide-thiol exchanger 2
chrX	48429476	48436736	-	48429476	48432023	5pMXE	0.5	50	50	ENSMUST00000144294.2	ENSMUSG00000087369.2	Gm14696	chrX	lncRNA	predicted gene 14696
chrX	48421496	48429341	-	48411129	48429341	A3SS	0.5	50	50	ENSMUST00000144294.2	ENSMUSG00000087369.2	Gm14696	chrX	lncRNA	predicted gene 14696
chrX	48559541	48582163	+	48553007	48582163	A5SS	0.33	50	50	ENSMUST00000130558.8	ENSMUSG00000036198.13	Arhgap36	chrX	protein_coding	Rho GTPase activating protein 36
chrX	48574626	48582163	+	48553007	48582163	A5SS	0.33	50	50	ENSMUST00000130558.8	ENSMUSG00000036198.13	Arhgap36	chrX	protein_coding	Rho GTPase activating protein 36
chrX	48582902	48583523	+	48582321	48583523	A5SS	0.5	50	50	ENSMUST00000130558.8	ENSMUSG00000036198.13	Arhgap36	chrX	protein_coding	Rho GTPase activating protein 36
chrX	48586941	48587867	+	48586941;48587517	48587347;48587867	ES	0.5	50	50	ENSMUST00000114904.10	ENSMUSG00000036198.13	Arhgap36	chrX	protein_coding	Rho GTPase activating protein 36
chrX	48574626	48582163	+	48559541	48582163	A5SS	0.33	50	50	ENSMUST00000114904.10	ENSMUSG00000036198.13	Arhgap36	chrX	protein_coding	Rho GTPase activating protein 36
chrX	48761956	48765871	+	48761956	48772188	A3SS	0.5	50	50	ENSMUST00000214375.2	ENSMUSG00000071764.3	Olfr1320	chrX	protein_coding	olfactory receptor 1320
chrX	48816114	48823814	-	48816812	48823814	A3SS	0.33	50	50	ENSMUST00000215373.3	ENSMUSG00000067971.6	Olfr1321	chrX	protein_coding	olfactory receptor 1321
chrX	48816236	48823814	-	48816812	48823814	A3SS	0.33	50	50	ENSMUST00000215373.3	ENSMUSG00000067971.6	Olfr1321	chrX	protein_coding	olfactory receptor 1321
chrX	48816236	48823814	-	48816114	48823814	A3SS	0.33	50	50	ENSMUST00000215918.2	ENSMUSG00000067971.6	Olfr1321	chrX	protein_coding	olfactory receptor 1321
chrX	48875429	48875736	-	48875152	48875736	A3SS	0.5	50	50	ENSMUST00000114893.8	ENSMUSG00000031111.17	Igsf1	chrX	protein_coding	immunoglobulin superfamily, member 1
chrX	49099881	49100736	-	49099881	49100741	A5SS	0.5	50	50	ENSMUST00000213556.3	ENSMUSG00000050504.4	Olfr1323	chrX	protein_coding	olfactory receptor 1323
chrX	49647261	49651557	-	49647261;49649883	49649686;49651557	ES	0.5	50	50	ENSMUST00000205059.3	ENSMUSG00000085396.8	Firre	chrX	lncRNA	functional intergenic repeating RNA element
chrX	49647261	49649454	-	49647261	49649686	A5SS	0.25	50	50	ENSMUST00000205059.3	ENSMUSG00000085396.8	Firre	chrX	lncRNA	functional intergenic repeating RNA element
chrX	49647261;49651831	49651557;49653690	-	49647261	49653690	cassetteExon	0.5	100	100	ENSMUST00000124842.8	ENSMUSG00000085396.8	Firre	chrX	lncRNA	functional intergenic repeating RNA element
chrX	49704392;49709681	49709552;49715314	-	49704392	49715314	cassetteExon	0.5	100	100	ENSMUST00000124842.8	ENSMUSG00000085396.8	Firre	chrX	lncRNA	functional intergenic repeating RNA element
chrX	49715386;49716127	49716084;49719768	-	49715386	49719768	cassetteExon	0.5	100	100	ENSMUST00000124842.8	ENSMUSG00000085396.8	Firre	chrX	lncRNA	functional intergenic repeating RNA element
chrX	49715386;49716186	49716084;49719768	-	49715386	49719768	cassetteExon	0.5	100	100	ENSMUST00000124842.8	ENSMUSG00000085396.8	Firre	chrX	lncRNA	functional intergenic repeating RNA element
chrX	49701727	49704238	-	49653844	49704238	A3SS	0.5	50	50	ENSMUST00000124842.8	ENSMUSG00000085396.8	Firre	chrX	lncRNA	functional intergenic repeating RNA element
chrX	49647261	49649454	-	49647261	49653690	A5SS	0.25	50	50	ENSMUST00000124842.8	ENSMUSG00000085396.8	Firre	chrX	lncRNA	functional intergenic repeating RNA element
chrX	49647261	49649686	-	49647261	49653690	A5SS	0.25	50	50	ENSMUST00000124842.8	ENSMUSG00000085396.8	Firre	chrX	lncRNA	functional intergenic repeating RNA element
chrX	49653844	49656417	-	49653844	49704238	A5SS	0.5	50	50	ENSMUST00000124842.8	ENSMUSG00000085396.8	Firre	chrX	lncRNA	functional intergenic repeating RNA element
chrX	49647261	49653690	-	49647261	49651557	5pMXE	0.25	50	50	ENSMUST00000204729.2	ENSMUSG00000085396.8	Firre	chrX	lncRNA	functional intergenic repeating RNA element
chrX	49647261;49649883	49649454;49651557	-	49647261	49651557	cassetteExon	0.5	100	100	ENSMUST00000204729.2	ENSMUSG00000085396.8	Firre	chrX	lncRNA	functional intergenic repeating RNA element
chrX	49647261	49651557	-	49647261	49649454	5pMXE	0.25	50	50	ENSMUST00000203672.2	ENSMUSG00000085396.8	Firre	chrX	lncRNA	functional intergenic repeating RNA element
chrX	49647261	49651557	-	49649883	49651557	3pMXE	0.5	50	50	ENSMUST00000204974.3	ENSMUSG00000085396.8	Firre	chrX	lncRNA	functional intergenic repeating RNA element
chrX	49659168	49662101	-	49659168;49662018	49661892;49662101	ES	0.5	50	50	ENSMUST00000204974.3	ENSMUSG00000085396.8	Firre	chrX	lncRNA	functional intergenic repeating RNA element
chrX	49666901	49669458	-	49666901	49669690	A5SS	0.5	50	50	ENSMUST00000204974.3	ENSMUSG00000085396.8	Firre	chrX	lncRNA	functional intergenic repeating RNA element
chrX	49716186	49719768	-	49716127	49719768	A3SS	0.33	50	50	ENSMUST00000143999.8	ENSMUSG00000085396.8	Firre	chrX	lncRNA	functional intergenic repeating RNA element
chrX	49968422	49973455	+	49968422	49974466	A3SS	0.5	50	50	ENSMUST00000033444.11	ENSMUSG00000031112.11	Stk26	chrX	protein_coding	serine/threonine kinase 26
chrX	49977986	49978719	+	49977986	49978566	A3SS&ES	0.5	50	50	ENSMUST00000033444.11	ENSMUSG00000031112.11	Stk26	chrX	protein_coding	serine/threonine kinase 26
chrX	49967356	49968366	+	49959363	49968366	A5SS	0.5	50	50	ENSMUST00000033444.11	ENSMUSG00000031112.11	Stk26	chrX	protein_coding	serine/threonine kinase 26
chrX	49998725	50001457	-	49998725	50004193	A5SS	0.5	50	50	ENSMUST00000164311.7	ENSMUSG00000036131.13	Frmd7	chrX	protein_coding	FERM domain containing 7
chrX	50212788;50215038	50215003;50217798	-	50212788	50217798	cassetteExon	0.5	100	100	ENSMUST00000114875.8	ENSMUSG00000036109.18	Mbnl3	chrX	protein_coding	muscleblind like splicing factor 3
chrX	50228245;50253541	50253295;50294651	-	50228245	50294651	cassetteExon	0.5	100	100	ENSMUST00000114875.8	ENSMUSG00000036109.18	Mbnl3	chrX	protein_coding	muscleblind like splicing factor 3
chrX	50211762	50212694	-	50209895	50212694	A3SS	0.5	50	50	ENSMUST00000114875.8	ENSMUSG00000036109.18	Mbnl3	chrX	protein_coding	muscleblind like splicing factor 3
chrX	50217843	50218982	-	50217948	50218982	A3SS	0.5	50	50	ENSMUST00000114875.8	ENSMUSG00000036109.18	Mbnl3	chrX	protein_coding	muscleblind like splicing factor 3
chrX	50228245	50235269	-	50228245	50294651	A5SS	0.33	50	50	ENSMUST00000114875.8	ENSMUSG00000036109.18	Mbnl3	chrX	protein_coding	muscleblind like splicing factor 3
chrX	50228245	50253295	-	50228245	50235269	5pMXE	0.33	50	50	ENSMUST00000041495.14	ENSMUSG00000036109.18	Mbnl3	chrX	protein_coding	muscleblind like splicing factor 3
chrX	50253541	50295302	-	50253541	50294651	5pMXE	0.5	50	50	ENSMUST00000114876.9	ENSMUSG00000036109.18	Mbnl3	chrX	protein_coding	muscleblind like splicing factor 3
chrX	50228245	50294651	-	50228245	50253295	5pMXE	0.33	50	50	ENSMUST00000136404.3	ENSMUSG00000036109.18	Mbnl3	chrX	protein_coding	muscleblind like splicing factor 3
chrX	50769285	50769404	-	50769285	50770052	A5SS	0.33	50	50	ENSMUST00000088172.12	ENSMUSG00000062184.12	Hs6st2	chrX	protein_coding	heparan sulfate 6-O-sulfotransferase 2
chrX	50769285	50769774	-	50769285	50770052	A5SS	0.33	50	50	ENSMUST00000088172.12	ENSMUSG00000062184.12	Hs6st2	chrX	protein_coding	heparan sulfate 6-O-sulfotransferase 2
chrX	50560283	50768767	-	50479238	50768767	A3SS	0.5	50	50	ENSMUST00000114871.2	ENSMUSG00000062184.12	Hs6st2	chrX	protein_coding	heparan sulfate 6-O-sulfotransferase 2
chrX	50479238	50517535	-	50479238	50768767	A5SS	0.5	50	50	ENSMUST00000114871.2	ENSMUSG00000062184.12	Hs6st2	chrX	protein_coding	heparan sulfate 6-O-sulfotransferase 2
chrX	50769285	50769774	-	50769285	50769404	5pMXE	0.33	50	50	ENSMUST00000142983.2	ENSMUSG00000062184.12	Hs6st2	chrX	protein_coding	heparan sulfate 6-O-sulfotransferase 2
chrX	51059162	51059360	-	51059162	51059787	A5SS	0.5	50	50	ENSMUST00000033449.8	ENSMUSG00000031118.9	Magea14	chrX	protein_coding	MAGE family member A14
chrX	51674536	51683044	+	51674536	51683042	A3SS	0.5	50	50	ENSMUST00000114854.8	ENSMUSG00000055110.9	A630012P03Rik	chrX	lncRNA	RIKEN cDNA A630012P03 gene
chrX	51832797	51833734	-	51832797	51833112	5pMXE	0.5	50	50	ENSMUST00000143479.8	ENSMUSG00000086173.8	Kis2	chrX	lncRNA	Kaplan integration site 2
chrX	52013558	52020858	+	52020583	52020858	A5SS&ES	0.5	50	50	ENSMUST00000078944.13	ENSMUSG00000025626.17	Phf6	chrX	protein_coding	PHD finger protein 6
chrX	52013558	52029102	+	52020901	52029102	A5SS&ES	0.5	50	50	ENSMUST00000078944.13	ENSMUSG00000025626.17	Phf6	chrX	protein_coding	PHD finger protein 6
chrX	52001313	52005430	+	52001313	52020450	A3SS	0.5	50	50	ENSMUST00000154864.4	ENSMUSG00000025626.17	Phf6	chrX	protein_coding	PHD finger protein 6
chrX	52006144	52020450	+	52001313	52020450	A5SS	0.5	50	50	ENSMUST00000154864.4	ENSMUSG00000025626.17	Phf6	chrX	protein_coding	PHD finger protein 6
chrX	52013558	52029102	+	52013558;52020901	52020858;52029102	ES	0.5	50	50	ENSMUST00000177780.8	ENSMUSG00000025626.17	Phf6	chrX	protein_coding	PHD finger protein 6
chrX	52144367	52144733	-	52144367	52145019	A5SS	0.5	50	50	ENSMUST00000155622.8	ENSMUSG00000087365.8	C430049B03Rik	chrX	lncRNA	RIKEN cDNA C430049B03 gene
chrX	52187367	52203172	-	52187367	52328914	A5SS	0.33	50	50	ENSMUST00000074861.9	ENSMUSG00000061082.12	Plac1	chrX	protein_coding	placental specific protein 1
chrX	52187367	52298484	-	52187367	52328914	A5SS	0.33	50	50	ENSMUST00000074861.9	ENSMUSG00000061082.12	Plac1	chrX	protein_coding	placental specific protein 1
chrX	52187367	52298484	-	52187367	52203172	5pMXE	0.33	50	50	ENSMUST00000114843.9	ENSMUSG00000061082.12	Plac1	chrX	protein_coding	placental specific protein 1
chrX	52334248	52342913	-	52335167	52342913	A3SS	0.33	50	50	ENSMUST00000071023.12	ENSMUSG00000036022.16	Fam122b	chrX	protein_coding	family with sequence similarity 122, member B
chrX	52342805	52342913	-	52335167	52342913	A3SS	0.33	50	50	ENSMUST00000071023.12	ENSMUSG00000036022.16	Fam122b	chrX	protein_coding	family with sequence similarity 122, member B
chrX	52347895	52348718	-	52347898	52348718	A3SS	0.5	50	50	ENSMUST00000071023.12	ENSMUSG00000036022.16	Fam122b	chrX	protein_coding	family with sequence similarity 122, member B
chrX	52334248;52342805	52342731;52342913	-	52334248	52342913	cassetteExon	0.5	100	100	ENSMUST00000114841.2	ENSMUSG00000036022.16	Fam122b	chrX	protein_coding	family with sequence similarity 122, member B
chrX	52436742	52444530	-	52436742	52444533	A5SS	0.5	50	50	ENSMUST00000152743.8	ENSMUSG00000023074.12	Mospd1	chrX	protein_coding	motile sperm domain containing 1
chrX	52580801	52581674	-	52580801	52610835	A5SS	0.5	50	50	ENSMUST00000123034.3	ENSMUSG00000079593.12	4933416I08Rik	chrX	protein_coding	RIKEN cDNA 4933416I08 gene
chrX	52708166	52715290	-	52708166	52712405	5pMXE	0.5	50	50	ENSMUST00000187290.7	ENSMUSG00000085998.9	AW822252	chrX	transcribed_unprocessed_pseudogene	expressed sequence AW822252
chrX	52715824	52717234	-	52715716	52717234	A3SS	0.5	50	50	ENSMUST00000148826.8	ENSMUSG00000085998.9	AW822252	chrX	transcribed_unprocessed_pseudogene	expressed sequence AW822252
chrX	52717370	52718361	-	52717370	52717849	A5SS&ES	0.5	50	50	ENSMUST00000148826.8	ENSMUSG00000085998.9	AW822252	chrX	transcribed_unprocessed_pseudogene	expressed sequence AW822252
chrX	52786139	52786459	-	52780367	52786459	A3SS	0.5	50	50	ENSMUST00000067782.8	ENSMUSG00000054626.12	Xlr	chrX	protein_coding	X-linked lymphocyte-regulated
chrX	52798187	52799599	-	52798187	52799591	A5SS	0.5	50	50	ENSMUST00000067782.8	ENSMUSG00000054626.12	Xlr	chrX	protein_coding	X-linked lymphocyte-regulated
chrX	52798187	52799599	-	52798235	52799599	A3SS	0.5	50	50	ENSMUST00000067763.10	ENSMUSG00000054626.12	Xlr	chrX	protein_coding	X-linked lymphocyte-regulated
chrX	55242951	55247367	-	55242951;55246978	55246944;55247367	ES	0.5	50	50	ENSMUST00000101561.8	ENSMUSG00000073177.9	Gm773	chrX	protein_coding	predicted gene 773
chrX	55543344	55544928	+	55543345	55544928	A5SS	0.5	50	50	ENSMUST00000134138.2	ENSMUSG00000035967.16	Ints6l	chrX	protein_coding	integrator complex subunit 6 like
chrX	55538493;55539603	55539493;55541876	+	55538493	55541876	cassetteExon	0.5	100	100	ENSMUST00000039374.9	ENSMUSG00000035967.16	Ints6l	chrX	protein_coding	integrator complex subunit 6 like
chrX	55538493	55541876	+	55538493	55539493	3pMXE	0.5	50	50	ENSMUST00000101553.9	ENSMUSG00000035967.16	Ints6l	chrX	protein_coding	integrator complex subunit 6 like
chrX	55552359	55552574	+	55552422	55552574	A5SS	0.5	50	50	ENSMUST00000186445.7	ENSMUSG00000035967.16	Ints6l	chrX	protein_coding	integrator complex subunit 6 like
chrX	55665789	55667971	+	55665885	55667971	A5SS	0.5	50	50	ENSMUST00000144068.8	ENSMUSG00000060681.16	Slc9a6	chrX	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 6
chrX	55691313;55695958	55695869;55696988	+	55691313	55696988	cassetteExon	0.5	100	100	ENSMUST00000077741.12	ENSMUSG00000060681.16	Slc9a6	chrX	protein_coding	solute carrier family 9 (sodium/hydrogen exchanger), member 6
chrX	55835406	55837204	+	55835406;55836010	55835824;55837204	ES	0.33	50	50	ENSMUST00000023854.10	ENSMUSG00000023092.17	Fhl1	chrX	protein_coding	four and a half LIM domains 1
chrX	55836010;55836798	55836599;55837204	+	55836010	55837204	cassetteExon	0.5	100	100	ENSMUST00000023854.10	ENSMUSG00000023092.17	Fhl1	chrX	protein_coding	four and a half LIM domains 1
chrX	55777528	55799695	+	55777228	55799695	A5SS	0.5	50	50	ENSMUST00000023854.10	ENSMUSG00000023092.17	Fhl1	chrX	protein_coding	four and a half LIM domains 1
chrX	55824883	55833349	+	55799751	55833349	A5SS	0.16	50	50	ENSMUST00000023854.10	ENSMUSG00000023092.17	Fhl1	chrX	protein_coding	four and a half LIM domains 1
chrX	55825154	55833349	+	55799751	55833349	A5SS	0.16	50	50	ENSMUST00000023854.10	ENSMUSG00000023092.17	Fhl1	chrX	protein_coding	four and a half LIM domains 1
chrX	55825268	55833349	+	55799751	55833349	A5SS	0.16	50	50	ENSMUST00000023854.10	ENSMUSG00000023092.17	Fhl1	chrX	protein_coding	four and a half LIM domains 1
chrX	55831942	55833349	+	55799751	55833349	A5SS	0.16	50	50	ENSMUST00000023854.10	ENSMUSG00000023092.17	Fhl1	chrX	protein_coding	four and a half LIM domains 1
chrX	55833196	55833349	+	55799751	55833349	A5SS	0.16	50	50	ENSMUST00000023854.10	ENSMUSG00000023092.17	Fhl1	chrX	protein_coding	four and a half LIM domains 1
chrX	55825154	55833349	+	55824883	55833349	A5SS	0.16	50	50	ENSMUST00000114773.10	ENSMUSG00000023092.17	Fhl1	chrX	protein_coding	four and a half LIM domains 1
chrX	55825268	55833349	+	55824883	55833349	A5SS	0.16	50	50	ENSMUST00000114773.10	ENSMUSG00000023092.17	Fhl1	chrX	protein_coding	four and a half LIM domains 1
chrX	55831942	55833349	+	55824883	55833349	A5SS	0.16	50	50	ENSMUST00000114773.10	ENSMUSG00000023092.17	Fhl1	chrX	protein_coding	four and a half LIM domains 1
chrX	55833196	55833349	+	55824883	55833349	A5SS	0.16	50	50	ENSMUST00000114773.10	ENSMUSG00000023092.17	Fhl1	chrX	protein_coding	four and a half LIM domains 1
chrX	55825268	55833349	+	55825154	55833349	A5SS	0.16	50	50	ENSMUST00000114772.9	ENSMUSG00000023092.17	Fhl1	chrX	protein_coding	four and a half LIM domains 1
chrX	55831942	55833349	+	55825154	55833349	A5SS	0.16	50	50	ENSMUST00000114772.9	ENSMUSG00000023092.17	Fhl1	chrX	protein_coding	four and a half LIM domains 1
chrX	55833196	55833349	+	55825154	55833349	A5SS	0.16	50	50	ENSMUST00000114772.9	ENSMUSG00000023092.17	Fhl1	chrX	protein_coding	four and a half LIM domains 1
chrX	55836798	55837204	+	55835406	55837204	A5SS	0.33	50	50	ENSMUST00000114768.10	ENSMUSG00000023092.17	Fhl1	chrX	protein_coding	four and a half LIM domains 1
chrX	55831942	55833349	+	55825268	55833349	A5SS	0.16	50	50	ENSMUST00000155882.8	ENSMUSG00000023092.17	Fhl1	chrX	protein_coding	four and a half LIM domains 1
chrX	55833196	55833349	+	55825268	55833349	A5SS	0.16	50	50	ENSMUST00000155882.8	ENSMUSG00000023092.17	Fhl1	chrX	protein_coding	four and a half LIM domains 1
chrX	55835406	55837204	+	55835406	55835824	3pMXE	0.5	50	50	ENSMUST00000144600.8	ENSMUSG00000023092.17	Fhl1	chrX	protein_coding	four and a half LIM domains 1
chrX	55833196	55833349	+	55831942	55833349	A5SS	0.16	50	50	ENSMUST00000144600.8	ENSMUSG00000023092.17	Fhl1	chrX	protein_coding	four and a half LIM domains 1
chrX	55856821	55858675	-	55856911	55858675	A3SS	0.5	50	50	ENSMUST00000114766.8	ENSMUSG00000067878.14	Map7d3	chrX	protein_coding	MAP7 domain containing 3
chrX	55987677	55999748	+	55987677;55994952	55994818;55999748	ES	0.5	50	50	ENSMUST00000154818.8	ENSMUSG00000053852.12	Adgrg4	chrX	protein_coding	adhesion G protein-coupled receptor G4
chrX	56013760	56022947	+	56013760;56018842	56018741;56022947	ES	0.5	50	50	ENSMUST00000154818.8	ENSMUSG00000053852.12	Adgrg4	chrX	protein_coding	adhesion G protein-coupled receptor G4
chrX	56023090	56046864	+	56023090	56025440	3pMXE	0.5	50	50	ENSMUST00000154818.8	ENSMUSG00000053852.12	Adgrg4	chrX	protein_coding	adhesion G protein-coupled receptor G4
chrX	55917980	55939613	+	55917980	55958503	A3SS	0.5	50	50	ENSMUST00000154818.8	ENSMUSG00000053852.12	Adgrg4	chrX	protein_coding	adhesion G protein-coupled receptor G4
chrX	55940227	55958503	+	55917980	55958503	A5SS	0.5	50	50	ENSMUST00000154818.8	ENSMUSG00000053852.12	Adgrg4	chrX	protein_coding	adhesion G protein-coupled receptor G4
chrX	55917980	55958503	+	55917980;55940227	55939613;55958503	ES	0.5	50	50	ENSMUST00000153784.8	ENSMUSG00000053852.12	Adgrg4	chrX	protein_coding	adhesion G protein-coupled receptor G4
chrX	55964397	55966785	+	55964397	55975363	A3SS	0.5	50	50	ENSMUST00000136396.8	ENSMUSG00000053852.12	Adgrg4	chrX	protein_coding	adhesion G protein-coupled receptor G4
chrX	55973670	55975363	+	55964397	55975363	A5SS	0.5	50	50	ENSMUST00000136396.8	ENSMUSG00000053852.12	Adgrg4	chrX	protein_coding	adhesion G protein-coupled receptor G4
chrX	56102014	56104246	+	56102014	56102251	3pMXE	0.5	50	50	ENSMUST00000114751.9	ENSMUSG00000067873.12	Htatsf1	chrX	protein_coding	HIV TAT specific factor 1
chrX	56134841;56135651	56135636;56137608	+	56134841	56137608	cassetteExon	0.5	100	100	ENSMUST00000033465.10	ENSMUSG00000031131.12	Vgll1	chrX	protein_coding	vestigial like family member 1
chrX	56145103	56146989	+	56144583	56146989	A5SS	0.5	50	50	ENSMUST00000033465.10	ENSMUSG00000031131.12	Vgll1	chrX	protein_coding	vestigial like family member 1
chrX	56286047	56288750	-	56286047;56287186	56287166;56288750	ES	0.5	50	50	ENSMUST00000033468.11	ENSMUSG00000031133.13	Arhgef6	chrX	protein_coding	Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
chrX	56344237	56344820	-	56334651	56344820	A3SS	0.5	50	50	ENSMUST00000033468.11	ENSMUSG00000031133.13	Arhgef6	chrX	protein_coding	Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
chrX	56325666	56326852	-	56325666	56334581	A5SS	0.5	50	50	ENSMUST00000033468.11	ENSMUSG00000031133.13	Arhgef6	chrX	protein_coding	Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
chrX	56345021	56346113	-	56345021	56347670	A5SS	0.5	50	50	ENSMUST00000033468.11	ENSMUSG00000031133.13	Arhgef6	chrX	protein_coding	Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
chrX	56350010	56371472	-	56350010	56382312	A5SS	0.5	50	50	ENSMUST00000033468.11	ENSMUSG00000031133.13	Arhgef6	chrX	protein_coding	Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
chrX	56286047;56288875	56288750;56289965	-	56286047	56289965	cassetteExon	0.5	100	100	ENSMUST00000114735.9	ENSMUSG00000031133.13	Arhgef6	chrX	protein_coding	Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
chrX	56286047	56287166	-	56286047	56289965	A5SS	0.33	50	50	ENSMUST00000114735.9	ENSMUSG00000031133.13	Arhgef6	chrX	protein_coding	Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
chrX	56432753	56433421	-	56430581	56433421	A3SS	0.5	50	50	ENSMUST00000140384.8	ENSMUSG00000031134.17	Rbmx	chrX	protein_coding	RNA binding motif protein, X chromosome
chrX	56437042	56438212	-	56437058	56438212	A3SS	0.25	50	50	ENSMUST00000140384.8	ENSMUSG00000031134.17	Rbmx	chrX	protein_coding	RNA binding motif protein, X chromosome
chrX	56437061	56438212	-	56437058	56438212	A3SS	0.25	50	50	ENSMUST00000140384.8	ENSMUSG00000031134.17	Rbmx	chrX	protein_coding	RNA binding motif protein, X chromosome
chrX	56437058	56438056	-	56437058	56438212	A5SS	0.5	50	50	ENSMUST00000140384.8	ENSMUSG00000031134.17	Rbmx	chrX	protein_coding	RNA binding motif protein, X chromosome
chrX	56437042	56438212	-	56437061	56438212	A3SS	0.25	50	50	ENSMUST00000098470.9	ENSMUSG00000031134.17	Rbmx	chrX	protein_coding	RNA binding motif protein, X chromosome
chrX	56435595;56437042	56436632;56438212	-	56435595	56438212	cassetteExon	0.5	100	100	ENSMUST00000143310.2	ENSMUSG00000031134.17	Rbmx	chrX	protein_coding	RNA binding motif protein, X chromosome
chrX	56435595;56437058	56436632;56438212	-	56435595	56438212	cassetteExon	0.5	100	100	ENSMUST00000143310.2	ENSMUSG00000031134.17	Rbmx	chrX	protein_coding	RNA binding motif protein, X chromosome
chrX	56435595;56437061	56436632;56438212	-	56435595	56438212	cassetteExon	0.5	100	100	ENSMUST00000143310.2	ENSMUSG00000031134.17	Rbmx	chrX	protein_coding	RNA binding motif protein, X chromosome
chrX	57078885	57086538	+	57078885	57079730	3pMXE	0.5	50	50	ENSMUST00000088627.11	ENSMUSG00000067860.12	Zic3	chrX	protein_coding	zinc finger protein of the cerebellum 3
chrX	58177310	58211373	-	58177310	58179237	5pMXE	0.2	50	50	ENSMUST00000033473.12	ENSMUSG00000031137.18	Fgf13	chrX	protein_coding	fibroblast growth factor 13
chrX	58177310	58296159	-	58177310	58179237	5pMXE	0.2	50	50	ENSMUST00000033473.12	ENSMUSG00000031137.18	Fgf13	chrX	protein_coding	fibroblast growth factor 13
chrX	58177310	58178449	-	58177310	58179237	A5SS	0.2	50	50	ENSMUST00000033473.12	ENSMUSG00000031137.18	Fgf13	chrX	protein_coding	fibroblast growth factor 13
chrX	58177310	58178503	-	58177310	58179237	A5SS	0.2	50	50	ENSMUST00000033473.12	ENSMUSG00000031137.18	Fgf13	chrX	protein_coding	fibroblast growth factor 13
chrX	58177310	58296159	-	58177310	58211373	5pMXE	0.2	50	50	ENSMUST00000119306.2	ENSMUSG00000031137.18	Fgf13	chrX	protein_coding	fibroblast growth factor 13
chrX	58177310	58178449	-	58177310	58211373	A5SS	0.2	50	50	ENSMUST00000119306.2	ENSMUSG00000031137.18	Fgf13	chrX	protein_coding	fibroblast growth factor 13
chrX	58177310	58178503	-	58177310	58211373	A5SS	0.2	50	50	ENSMUST00000119306.2	ENSMUSG00000031137.18	Fgf13	chrX	protein_coding	fibroblast growth factor 13
chrX	58296326	58612500	-	58177311	58612500	A3SS	0.5	50	50	ENSMUST00000119833.8	ENSMUSG00000031137.18	Fgf13	chrX	protein_coding	fibroblast growth factor 13
chrX	58612708	58612856	-	58612708	58613344	A5SS	0.5	50	50	ENSMUST00000119833.8	ENSMUSG00000031137.18	Fgf13	chrX	protein_coding	fibroblast growth factor 13
chrX	58177310	58296159	-	58177310	58178503	5pMXE	0.2	50	50	ENSMUST00000138503.2	ENSMUSG00000031137.18	Fgf13	chrX	protein_coding	fibroblast growth factor 13
chrX	58177310	58178449	-	58177310	58178503	A5SS	0.2	50	50	ENSMUST00000138503.2	ENSMUSG00000031137.18	Fgf13	chrX	protein_coding	fibroblast growth factor 13
chrX	58177310	58296159	-	58177310	58178449	5pMXE	0.2	50	50	ENSMUST00000123660.2	ENSMUSG00000031137.18	Fgf13	chrX	protein_coding	fibroblast growth factor 13
chrX	59181733	59198260	-	59181733	59192834	5pMXE	0.5	50	50	ENSMUST00000101531.10	ENSMUSG00000031139.17	Mcf2	chrX	protein_coding	mcf.2 transforming sequence
chrX	59160506;59164496	59164449;59166300	-	59160506	59166300	cassetteExon	0.5	100	100	ENSMUST00000101531.10	ENSMUSG00000031139.17	Mcf2	chrX	protein_coding	mcf.2 transforming sequence
chrX	59271153	59281917	-	59271153;59274612	59274508;59281917	ES	0.5	50	50	ENSMUST00000154051.8	ENSMUSG00000062949.14	Atp11c	chrX	protein_coding	ATPase, class VI, type 11C
chrX	59337743	59340549	-	59337743;59339017	59338967;59340549	ES	0.5	50	50	ENSMUST00000154051.8	ENSMUSG00000062949.14	Atp11c	chrX	protein_coding	ATPase, class VI, type 11C
chrX	59305657	59307012	-	59305666	59307012	A3SS	0.5	50	50	ENSMUST00000154051.8	ENSMUSG00000062949.14	Atp11c	chrX	protein_coding	ATPase, class VI, type 11C
chrX	59366913	59448996	-	59366913	59636136	A5SS	0.5	50	50	ENSMUST00000154051.8	ENSMUSG00000062949.14	Atp11c	chrX	protein_coding	ATPase, class VI, type 11C
chrX	60163030	60176972	+	60163030;60165765	60165618;60176972	ES	0.5	50	50	ENSMUST00000232283.2	ENSMUSG00000071753.14	Cdr1os	chrX	lncRNA	cerebellar degeneration related antigen 1, opposite strand
chrX	60178402	60216591	+	60178402	60205054	3pMXE	0.16	50	50	ENSMUST00000232283.2	ENSMUSG00000071753.14	Cdr1os	chrX	lncRNA	cerebellar degeneration related antigen 1, opposite strand
chrX	60178402	60218734	+	60178402	60205054	3pMXE	0.16	50	50	ENSMUST00000232283.2	ENSMUSG00000071753.14	Cdr1os	chrX	lncRNA	cerebellar degeneration related antigen 1, opposite strand
chrX	60178402	60226854	+	60178402	60205054	3pMXE	0.16	50	50	ENSMUST00000232283.2	ENSMUSG00000071753.14	Cdr1os	chrX	lncRNA	cerebellar degeneration related antigen 1, opposite strand
chrX	60178402	60247302	+	60178402	60205054	3pMXE	0.16	50	50	ENSMUST00000232283.2	ENSMUSG00000071753.14	Cdr1os	chrX	lncRNA	cerebellar degeneration related antigen 1, opposite strand
chrX	60177109	60178319	+	60177109	60178327	A3SS	0.5	50	50	ENSMUST00000232283.2	ENSMUSG00000071753.14	Cdr1os	chrX	lncRNA	cerebellar degeneration related antigen 1, opposite strand
chrX	60178402	60182829	+	60178402	60205054	A3SS	0.16	50	50	ENSMUST00000232283.2	ENSMUSG00000071753.14	Cdr1os	chrX	lncRNA	cerebellar degeneration related antigen 1, opposite strand
chrX	60160064	60162193	+	60161853	60162193	A5SS&ES	0.5	50	50	ENSMUST00000232283.2	ENSMUSG00000071753.14	Cdr1os	chrX	lncRNA	cerebellar degeneration related antigen 1, opposite strand
chrX	60178402	60218734	+	60178402;60216648	60216591;60218734	ES	0.5	50	50	ENSMUST00000144853.9	ENSMUSG00000071753.14	Cdr1os	chrX	lncRNA	cerebellar degeneration related antigen 1, opposite strand
chrX	60178402	60182829	+	60178402	60216591	A3SS	0.25	50	50	ENSMUST00000144853.9	ENSMUSG00000071753.14	Cdr1os	chrX	lncRNA	cerebellar degeneration related antigen 1, opposite strand
chrX	60163030	60178327	+	60163030;60177109	60176972;60178327	ES	0.5	50	50	ENSMUST00000140023.8	ENSMUSG00000071753.14	Cdr1os	chrX	lncRNA	cerebellar degeneration related antigen 1, opposite strand
chrX	60178402	60218734	+	60178402	60182829	3pMXE	0.16	50	50	ENSMUST00000125930.9	ENSMUSG00000071753.14	Cdr1os	chrX	lncRNA	cerebellar degeneration related antigen 1, opposite strand
chrX	60178402	60226854	+	60178402	60182829	3pMXE	0.16	50	50	ENSMUST00000125930.9	ENSMUSG00000071753.14	Cdr1os	chrX	lncRNA	cerebellar degeneration related antigen 1, opposite strand
chrX	60178402	60247302	+	60178402	60182829	3pMXE	0.16	50	50	ENSMUST00000125930.9	ENSMUSG00000071753.14	Cdr1os	chrX	lncRNA	cerebellar degeneration related antigen 1, opposite strand
chrX	60178402	60247302	+	60178402	60218734	3pMXE	0.16	50	50	ENSMUST00000232525.2	ENSMUSG00000071753.14	Cdr1os	chrX	lncRNA	cerebellar degeneration related antigen 1, opposite strand
chrX	60178402	60226854	+	60178402	60218734	A3SS	0.16	50	50	ENSMUST00000232525.2	ENSMUSG00000071753.14	Cdr1os	chrX	lncRNA	cerebellar degeneration related antigen 1, opposite strand
chrX	60178402	60247302	+	60178402;60229780	60226854;60247302	ES	0.5	50	50	ENSMUST00000231449.2	ENSMUSG00000071753.14	Cdr1os	chrX	lncRNA	cerebellar degeneration related antigen 1, opposite strand
chrX	60163030	60165618	+	60163030	60178327	A3SS	0.33	50	50	ENSMUST00000231449.2	ENSMUSG00000071753.14	Cdr1os	chrX	lncRNA	cerebellar degeneration related antigen 1, opposite strand
chrX	60178402	60216591	+	60178402	60226854	A3SS	0.16	50	50	ENSMUST00000231449.2	ENSMUSG00000071753.14	Cdr1os	chrX	lncRNA	cerebellar degeneration related antigen 1, opposite strand
chrX	60225205	60226854	+	60178402	60226854	A5SS	0.5	50	50	ENSMUST00000231449.2	ENSMUSG00000071753.14	Cdr1os	chrX	lncRNA	cerebellar degeneration related antigen 1, opposite strand
chrX	60178402	60216591	+	60178402	60247302	A3SS	0.16	50	50	ENSMUST00000232361.2	ENSMUSG00000118604.2	Gm53013	chrX	lncRNA	predicted gene, 53013
chrX	60178402	60226854	+	60178402	60247302	A3SS	0.16	50	50	ENSMUST00000232361.2	ENSMUSG00000118604.2	Gm53013	chrX	lncRNA	predicted gene, 53013
chrX	60229780	60247302	+	60178402	60247302	A5SS	0.5	50	50	ENSMUST00000232361.2	ENSMUSG00000118604.2	Gm53013	chrX	lncRNA	predicted gene, 53013
chrX	60331868	60334199	+	60247391	60334199	A5SS	0.5	50	50	ENSMUST00000232361.2	ENSMUSG00000118604.2	Gm53013	chrX	lncRNA	predicted gene, 53013
chrX	61330841	61332957	+	61327159	61332957	A5SS	0.5	50	50	ENSMUST00000178085.8	ENSMUSG00000045330.9	Magec2	chrX	protein_coding	MAGE family member C2
chrX	61558143	61570434	-	61558143	61559645	5pMXE	0.5	50	50	ENSMUST00000133350.8	ENSMUSG00000085757.8	Tslrn1	chrX	lncRNA	testis specific long noncoding RNA 1
chrX	63218071	63219534	+	63217297	63219534	A5SS	0.5	50	50	ENSMUST00000033522.15	ENSMUSG00000031179.15	Magea9	chrX	protein_coding	MAGE family member A9
chrX	63316715	63320406	-	63316715;63317696	63317625;63320406	ES	0.5	50	50	ENSMUST00000069926.14	ENSMUSG00000046699.15	Slitrk4	chrX	protein_coding	SLIT and NTRK-like family, member 4
chrX	63317696	63319180	-	63317696	63320406	A5SS	0.5	50	50	ENSMUST00000069926.14	ENSMUSG00000046699.15	Slitrk4	chrX	protein_coding	SLIT and NTRK-like family, member 4
chrX	67748986	67751648	+	67748986;67749529	67749467;67751648	ES	0.5	50	50	ENSMUST00000088546.12	ENSMUSG00000000838.18	Fmr1	chrX	protein_coding	FMRP translational regulator 1
chrX	67722473	67723258	+	67722473	67731888	A3SS	0.5	50	50	ENSMUST00000088546.12	ENSMUSG00000000838.18	Fmr1	chrX	protein_coding	FMRP translational regulator 1
chrX	67744026	67747275	+	67744026	67747269	A3SS	0.5	50	50	ENSMUST00000088546.12	ENSMUSG00000000838.18	Fmr1	chrX	protein_coding	FMRP translational regulator 1
chrX	67754385	67755912	+	67754385	67755837	A3SS	0.5	50	50	ENSMUST00000088546.12	ENSMUSG00000000838.18	Fmr1	chrX	protein_coding	FMRP translational regulator 1
chrX	67756929	67759120	+	67756929	67759171	A3SS	0.5	50	50	ENSMUST00000088546.12	ENSMUSG00000000838.18	Fmr1	chrX	protein_coding	FMRP translational regulator 1
chrX	67805837	67815651	+	67805837;67807615	67807538;67815651	ES	0.33	50	50	ENSMUST00000069731.12	ENSMUSG00000062170.13	Fmr1nb	chrX	protein_coding	Fmr1 neighbor
chrX	67807615;67812699	67812562;67815651	+	67807615	67815651	cassetteExon	0.5	100	100	ENSMUST00000069731.12	ENSMUSG00000062170.13	Fmr1nb	chrX	protein_coding	Fmr1 neighbor
chrX	67812699	67815651	+	67805837	67815651	A5SS	0.33	50	50	ENSMUST00000114647.8	ENSMUSG00000062170.13	Fmr1nb	chrX	protein_coding	Fmr1 neighbor
chrX	68567162	68588015	+	68567174	68588015	A5SS	0.5	50	50	ENSMUST00000033532.7	ENSMUSG00000031189.13	Aff2	chrX	protein_coding	AF4/FMR2 family, member 2
chrX	69396876;69399853	69399725;69401873	-	69396876	69401873	cassetteExon	0.5	100	100	ENSMUST00000101509.9	ENSMUSG00000035847.16	Ids	chrX	protein_coding	iduronate 2-sulfatase
chrX	69506627;69508692	69508609;69510760	-	69506627	69510760	cassetteExon	0.5	100	100	ENSMUST00000101506.10	ENSMUSG00000073139.10	Tmem185a	chrX	protein_coding	transmembrane protein 185A
chrX	69510809	69513724	-	69510967	69513724	A3SS	0.33	50	50	ENSMUST00000101506.10	ENSMUSG00000073139.10	Tmem185a	chrX	protein_coding	transmembrane protein 185A
chrX	69510962	69513724	-	69510967	69513724	A3SS	0.33	50	50	ENSMUST00000101506.10	ENSMUSG00000073139.10	Tmem185a	chrX	protein_coding	transmembrane protein 185A
chrX	69510962	69513724	-	69510809	69513724	A3SS	0.33	50	50	ENSMUST00000154400.8	ENSMUSG00000073139.10	Tmem185a	chrX	protein_coding	transmembrane protein 185A
chrX	70163000;70190041	70189792;70195796	+	70163000	70195796	cassetteExon	0.5	100	100	ENSMUST00000239162.2	ENSMUSG00000059401.15	Mamld1	chrX	protein_coding	mastermind-like domain containing 1
chrX	70163000	70164964	+	70163000	70195796	A3SS	0.33	50	50	ENSMUST00000239162.2	ENSMUSG00000059401.15	Mamld1	chrX	protein_coding	mastermind-like domain containing 1
chrX	70163000;70165074	70164964;70189792	+	70163000	70189792	cassetteExon	0.5	100	100	ENSMUST00000114629.4	ENSMUSG00000059401.15	Mamld1	chrX	protein_coding	mastermind-like domain containing 1
chrX	70343380	70346107	+	70343380;70345432	70345340;70346107	ES	0.5	50	50	ENSMUST00000171933.8	ENSMUSG00000031337.17	Mtm1	chrX	protein_coding	X-linked myotubular myopathy gene 1
chrX	70303432	70304176	+	70303432	70328207	A3SS	0.5	50	50	ENSMUST00000171933.8	ENSMUSG00000031337.17	Mtm1	chrX	protein_coding	X-linked myotubular myopathy gene 1
chrX	70258688	70274997	+	70254558	70274997	A5SS	0.33	50	50	ENSMUST00000171933.8	ENSMUSG00000031337.17	Mtm1	chrX	protein_coding	X-linked myotubular myopathy gene 1
chrX	70258753	70274997	+	70254558	70274997	A5SS	0.33	50	50	ENSMUST00000171933.8	ENSMUSG00000031337.17	Mtm1	chrX	protein_coding	X-linked myotubular myopathy gene 1
chrX	70258753	70274997	+	70258688	70274997	A5SS	0.33	50	50	ENSMUST00000101501.10	ENSMUSG00000031337.17	Mtm1	chrX	protein_coding	X-linked myotubular myopathy gene 1
chrX	70278552	70297857	+	70278552	70328207	A3SS	0.5	50	50	ENSMUST00000134859.8	ENSMUSG00000031337.17	Mtm1	chrX	protein_coding	X-linked myotubular myopathy gene 1
chrX	70303432	70328207	+	70278552	70328207	A5SS	0.5	50	50	ENSMUST00000134859.8	ENSMUSG00000031337.17	Mtm1	chrX	protein_coding	X-linked myotubular myopathy gene 1
chrX	70413510	70426806	+	70413510;70420516	70420493;70426806	ES	0.25	50	50	ENSMUST00000146213.8	ENSMUSG00000015214.15	Mtmr1	chrX	protein_coding	myotubularin related protein 1
chrX	70413510;70422670	70422620;70426806	+	70413510;70420516	70420493;70426806	MXE	0.5	100	100	ENSMUST00000146213.8	ENSMUSG00000015214.15	Mtmr1	chrX	protein_coding	myotubularin related protein 1
chrX	70420516;70421236	70421210;70426806	+	70420516	70426806	cassetteExon	0.5	100	100	ENSMUST00000146213.8	ENSMUSG00000015214.15	Mtmr1	chrX	protein_coding	myotubularin related protein 1
chrX	70420516;70422670	70422620;70426806	+	70420516	70426806	cassetteExon	0.5	100	100	ENSMUST00000146213.8	ENSMUSG00000015214.15	Mtmr1	chrX	protein_coding	myotubularin related protein 1
chrX	70413510;70422670	70422620;70426806	+	70413510	70426806	cassetteExon	0.5	100	100	ENSMUST00000114601.8	ENSMUSG00000015214.15	Mtmr1	chrX	protein_coding	myotubularin related protein 1
chrX	70454452	70455811	+	70454452	70455808	A3SS	0.5	50	50	ENSMUST00000114601.8	ENSMUSG00000015214.15	Mtmr1	chrX	protein_coding	myotubularin related protein 1
chrX	70421236	70426806	+	70413510	70426806	A5SS	0.25	50	50	ENSMUST00000114601.8	ENSMUSG00000015214.15	Mtmr1	chrX	protein_coding	myotubularin related protein 1
chrX	70455987	70460169	+	70455990	70460169	A5SS	0.5	50	50	ENSMUST00000114601.8	ENSMUSG00000015214.15	Mtmr1	chrX	protein_coding	myotubularin related protein 1
chrX	70413510;70420516	70420493;70422620	+	70413510	70422620	cassetteExon	0.5	100	100	ENSMUST00000132837.5	ENSMUSG00000015214.15	Mtmr1	chrX	protein_coding	myotubularin related protein 1
chrX	70421236	70422620	+	70413510	70422620	A5SS	0.33	50	50	ENSMUST00000132837.5	ENSMUSG00000015214.15	Mtmr1	chrX	protein_coding	myotubularin related protein 1
chrX	70421236	70426806	+	70422670	70426806	A5SS&ES	0.25	50	50	ENSMUST00000132837.5	ENSMUSG00000015214.15	Mtmr1	chrX	protein_coding	myotubularin related protein 1
chrX	70413510;70422670	70422620;70426806	+	70413510;70421236	70420493;70426806	MXE	0.5	100	100	ENSMUST00000149323.8	ENSMUSG00000015214.15	Mtmr1	chrX	protein_coding	myotubularin related protein 1
chrX	70420516;70422670	70422620;70426806	+	70420516;70421236	70421210;70426806	MXE	0.5	100	100	ENSMUST00000149323.8	ENSMUSG00000015214.15	Mtmr1	chrX	protein_coding	myotubularin related protein 1
chrX	70421236;70422670	70422620;70426806	+	70421236	70426806	cassetteExon	0.5	100	100	ENSMUST00000149323.8	ENSMUSG00000015214.15	Mtmr1	chrX	protein_coding	myotubularin related protein 1
chrX	70420516	70422620	+	70420516;70421236	70421210;70422620	ES	0.33	50	50	ENSMUST00000130909.8	ENSMUSG00000015214.15	Mtmr1	chrX	protein_coding	myotubularin related protein 1
chrX	70438071	70444147	+	70438072	70444147	A5SS	0.5	50	50	ENSMUST00000130179.2	ENSMUSG00000015214.15	Mtmr1	chrX	protein_coding	myotubularin related protein 1
chrX	70484217	70494217	-	70484217;70484751	70484680;70494217	ES	0.33	50	50	ENSMUST00000080035.11	ENSMUSG00000035776.15	Cd99l2	chrX	protein_coding	CD99 antigen-like 2
chrX	70484751;70493613	70493545;70494217	-	70484751	70494217	cassetteExon	0.5	100	100	ENSMUST00000080035.11	ENSMUSG00000035776.15	Cd99l2	chrX	protein_coding	CD99 antigen-like 2
chrX	70484751;70493613	70493545;70536128	-	70484751;70494279	70494217;70536128	MXE	0.5	100	100	ENSMUST00000080035.11	ENSMUSG00000035776.15	Cd99l2	chrX	protein_coding	CD99 antigen-like 2
chrX	70535616	70536128	-	70494279	70536128	A3SS	0.33	50	50	ENSMUST00000080035.11	ENSMUSG00000035776.15	Cd99l2	chrX	protein_coding	CD99 antigen-like 2
chrX	70493613	70536128	-	70493613;70494279	70494217;70536128	ES	0.33	50	50	ENSMUST00000037391.12	ENSMUSG00000035776.15	Cd99l2	chrX	protein_coding	CD99 antigen-like 2
chrX	70493613	70494217	-	70484217	70494217	A3SS	0.33	50	50	ENSMUST00000114586.9	ENSMUSG00000035776.15	Cd99l2	chrX	protein_coding	CD99 antigen-like 2
chrX	70493613	70536128	-	70494279	70536128	A3SS&ES	0.33	50	50	ENSMUST00000114586.9	ENSMUSG00000035776.15	Cd99l2	chrX	protein_coding	CD99 antigen-like 2
chrX	70484217;70494279	70494217;70536128	-	70484217;70493613	70484680;70536128	MXE	0.5	100	100	ENSMUST00000114587.3	ENSMUSG00000035776.15	Cd99l2	chrX	protein_coding	CD99 antigen-like 2
chrX	70535616	70536128	-	70493613	70536128	A3SS	0.33	50	50	ENSMUST00000114587.3	ENSMUSG00000035776.15	Cd99l2	chrX	protein_coding	CD99 antigen-like 2
chrX	70599614	70601663	+	70599614	70601659	A3SS	0.5	50	50	ENSMUST00000072699.13	ENSMUSG00000015217.12	Hmgb3	chrX	protein_coding	high mobility group box 3
chrX	70599796	70601659	+	70599614	70601659	A5SS	0.25	50	50	ENSMUST00000072699.13	ENSMUSG00000015217.12	Hmgb3	chrX	protein_coding	high mobility group box 3
chrX	70599843	70601659	+	70599614	70601659	A5SS	0.25	50	50	ENSMUST00000072699.13	ENSMUSG00000015217.12	Hmgb3	chrX	protein_coding	high mobility group box 3
chrX	70600714	70601659	+	70599614	70601659	A5SS	0.25	50	50	ENSMUST00000072699.13	ENSMUSG00000015217.12	Hmgb3	chrX	protein_coding	high mobility group box 3
chrX	70599843	70601659	+	70599796	70601659	A5SS	0.25	50	50	ENSMUST00000114582.9	ENSMUSG00000015217.12	Hmgb3	chrX	protein_coding	high mobility group box 3
chrX	70600714	70601659	+	70599796	70601659	A5SS	0.25	50	50	ENSMUST00000114582.9	ENSMUSG00000015217.12	Hmgb3	chrX	protein_coding	high mobility group box 3
chrX	70600714	70601659	+	70599843	70601659	A5SS	0.25	50	50	ENSMUST00000088874.10	ENSMUSG00000015217.12	Hmgb3	chrX	protein_coding	high mobility group box 3
chrX	70707608	70710686	+	70707608	70710131	A3SS	0.5	50	50	ENSMUST00000070449.6	ENSMUSG00000056380.14	Gpr50	chrX	protein_coding	G-protein-coupled receptor 50
chrX	70863783	70879621	+	70863783	70864411	3pMXE	0.5	50	50	ENSMUST00000114577.8	ENSMUSG00000073131.13	Vma21	chrX	protein_coding	VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
chrX	70860546	70863674	+	70860305	70863674	A5SS	0.25	50	50	ENSMUST00000114577.8	ENSMUSG00000073131.13	Vma21	chrX	protein_coding	VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
chrX	70860673	70863674	+	70860305	70863674	A5SS	0.25	50	50	ENSMUST00000114577.8	ENSMUSG00000073131.13	Vma21	chrX	protein_coding	VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
chrX	70861313	70863674	+	70860305	70863674	A5SS	0.25	50	50	ENSMUST00000114577.8	ENSMUSG00000073131.13	Vma21	chrX	protein_coding	VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
chrX	70860546;70861313	70861249;70863674	+	70860546	70863674	cassetteExon	0.5	100	100	ENSMUST00000114576.9	ENSMUSG00000073131.13	Vma21	chrX	protein_coding	VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
chrX	70860673	70863674	+	70860546	70863674	A5SS	0.25	50	50	ENSMUST00000114576.9	ENSMUSG00000073131.13	Vma21	chrX	protein_coding	VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
chrX	70861313	70863674	+	70860673	70863674	A5SS	0.25	50	50	ENSMUST00000114575.4	ENSMUSG00000073131.13	Vma21	chrX	protein_coding	VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
chrX	70976199	70977782	+	70974165	70977782	A5SS	0.5	50	50	ENSMUST00000154780.10	ENSMUSG00000073130.11	Gm1141	chrX	protein_coding	predicted gene 1141
chrX	71006653	71009421	+	71006385	71009421	A5SS	0.5	50	50	ENSMUST00000126362.8	ENSMUSG00000033361.14	Prrg3	chrX	protein_coding	proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane)
chrX	71026878	71031624	+	71026878;71031347	71031241;71031624	ES	0.5	50	50	ENSMUST00000066116.8	ENSMUSG00000053593.11	Fate1	chrX	protein_coding	fetal and adult testis expressed 1
chrX	71026425	71026770	+	71016661	71026770	A5SS	0.5	50	50	ENSMUST00000066116.8	ENSMUSG00000053593.11	Fate1	chrX	protein_coding	fetal and adult testis expressed 1
chrX	71035797	71045059	+	71035797	71046876	A3SS	0.5	50	50	ENSMUST00000006020.8	ENSMUSG00000005864.8	Cnga2	chrX	protein_coding	cyclic nucleotide gated channel alpha 2
chrX	71306188	71308125	-	71306188;71307431	71307349;71308125	ES	0.5	50	50	ENSMUST00000064780.4	ENSMUSG00000031340.9	Gabre	chrX	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit epsilon
chrX	71305142	71306051	-	71302172	71306051	A3SS	0.5	50	50	ENSMUST00000064780.4	ENSMUSG00000031340.9	Gabre	chrX	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit epsilon
chrX	71554978	71596283	-	71554978;71583790	71583669;71596283	ES	0.5	50	50	ENSMUST00000055966.13	ENSMUSG00000031343.14	Gabra3	chrX	protein_coding	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3
chrX	71960452	71961492	-	71960452	71961920	A5SS	0.33	50	50	ENSMUST00000114551.10	ENSMUSG00000031347.13	Cetn2	chrX	protein_coding	centrin 2
chrX	71960452	71961649	-	71960452	71961920	A5SS	0.33	50	50	ENSMUST00000114551.10	ENSMUSG00000031347.13	Cetn2	chrX	protein_coding	centrin 2
chrX	71960452	71961649	-	71960452	71961492	5pMXE	0.33	50	50	ENSMUST00000114550.8	ENSMUSG00000031347.13	Cetn2	chrX	protein_coding	centrin 2
chrX	72044677	72045014	+	72044677	72045011	A3SS	0.5	50	50	ENSMUST00000164800.8	ENSMUSG00000031351.16	Zfp185	chrX	protein_coding	zinc finger protein 185
chrX	72032008	72040641	+	72031125	72040641	A5SS	0.5	50	50	ENSMUST00000164800.8	ENSMUSG00000031351.16	Zfp185	chrX	protein_coding	zinc finger protein 185
chrX	72125194	72125591	-	72125207	72125591	A3SS	0.5	50	50	ENSMUST00000078775.13	ENSMUSG00000079845.9	Xlr4a	chrX	protein_coding	X-linked lymphocyte-regulated 4A
chrX	72125207	72125627	-	72125207	72125591	A5SS	0.5	50	50	ENSMUST00000078775.13	ENSMUSG00000079845.9	Xlr4a	chrX	protein_coding	X-linked lymphocyte-regulated 4A
chrX	72137858	72140587	-	72137858;72138688	72138552;72140587	ES	0.5	50	50	ENSMUST00000114524.9	ENSMUSG00000057836.13	Xlr3a	chrX	protein_coding	X-linked lymphocyte-regulated 3A
chrX	72137858	72138430	-	72137858	72138552	A5SS	0.25	50	50	ENSMUST00000114524.9	ENSMUSG00000057836.13	Xlr3a	chrX	protein_coding	X-linked lymphocyte-regulated 3A
chrX	72137858	72138567	-	72137858	72138552	A5SS	0.25	50	50	ENSMUST00000114524.9	ENSMUSG00000057836.13	Xlr3a	chrX	protein_coding	X-linked lymphocyte-regulated 3A
chrX	72138688	72140439	-	72138688	72140587	A5SS	0.5	50	50	ENSMUST00000114524.9	ENSMUSG00000057836.13	Xlr3a	chrX	protein_coding	X-linked lymphocyte-regulated 3A
chrX	72137858	72140587	-	72137858;72138688	72138567;72140587	ES	0.5	50	50	ENSMUST00000074619.6	ENSMUSG00000057836.13	Xlr3a	chrX	protein_coding	X-linked lymphocyte-regulated 3A
chrX	72130979	72138552	-	72130979	72133006	A5SS&ES	0.5	50	50	ENSMUST00000074619.6	ENSMUSG00000057836.13	Xlr3a	chrX	protein_coding	X-linked lymphocyte-regulated 3A
chrX	72137858	72138430	-	72137858	72138567	A5SS	0.25	50	50	ENSMUST00000074619.6	ENSMUSG00000057836.13	Xlr3a	chrX	protein_coding	X-linked lymphocyte-regulated 3A
chrX	72137858	72138552	-	72130979	72138552	A3SS	0.5	50	50	ENSMUST00000172938.2	ENSMUSG00000057836.13	Xlr3a	chrX	protein_coding	X-linked lymphocyte-regulated 3A
chrX	72137858;72138688	72138430;72140587	-	72137858	72140587	cassetteExon	0.5	100	100	ENSMUST00000173473.8	ENSMUSG00000057836.13	Xlr3a	chrX	protein_coding	X-linked lymphocyte-regulated 3A
chrX	72137858	72140587	-	72138688	72140587	3pMXE	0.5	50	50	ENSMUST00000174162.2	ENSMUSG00000057836.13	Xlr3a	chrX	protein_coding	X-linked lymphocyte-regulated 3A
chrX	72152323	72155021	-	72152323;72153633	72153535;72155021	ES	0.5	50	50	ENSMUST00000078574.12	ENSMUSG00000058328.14	Xlr5a	chrX	protein_coding	X-linked lymphocyte-regulated 5A
chrX	72158877	72336482	-	72158877	72161208	5pMXE	0.33	50	50	ENSMUST00000078574.12	ENSMUSG00000058328.14	Xlr5a	chrX	protein_coding	X-linked lymphocyte-regulated 5A
chrX	72158877	72161285	-	72158877	72161208	A5SS	0.33	50	50	ENSMUST00000078574.12	ENSMUSG00000058328.14	Xlr5a	chrX	protein_coding	X-linked lymphocyte-regulated 5A
chrX	72158877	72336482	-	72158877	72161285	5pMXE	0.33	50	50	ENSMUST00000114521.8	ENSMUSG00000058328.14	Xlr5a	chrX	protein_coding	X-linked lymphocyte-regulated 5A
chrX	72334152	72336482	-	72158877	72336482	A3SS	0.5	50	50	ENSMUST00000179600.8	ENSMUSG00000058328.14	Xlr5a	chrX	protein_coding	X-linked lymphocyte-regulated 5A
chrX	72237897	72238606	+	72237912	72238606	A5SS	0.5	50	50	ENSMUST00000137641.8	ENSMUSG00000073125.11	Xlr3b	chrX	protein_coding	X-linked lymphocyte-regulated 3B
chrX	72258961;72259264	72259092;72259647	+	72258961	72259647	cassetteExon	0.5	100	100	ENSMUST00000156188.8	ENSMUSG00000067768.13	Xlr4b	chrX	protein_coding	X-linked lymphocyte-regulated 4B
chrX	72258462	72258834	+	72258462	72258847	A3SS	0.5	50	50	ENSMUST00000156188.8	ENSMUSG00000067768.13	Xlr4b	chrX	protein_coding	X-linked lymphocyte-regulated 4B
chrX	72258063	72258380	+	72258087	72258380	A5SS	0.33	50	50	ENSMUST00000156188.8	ENSMUSG00000067768.13	Xlr4b	chrX	protein_coding	X-linked lymphocyte-regulated 4B
chrX	72258191	72258380	+	72258087	72258380	A5SS	0.33	50	50	ENSMUST00000156188.8	ENSMUSG00000067768.13	Xlr4b	chrX	protein_coding	X-linked lymphocyte-regulated 4B
chrX	72258426	72258834	+	72258462	72258834	A5SS	0.5	50	50	ENSMUST00000069077.10	ENSMUSG00000067768.13	Xlr4b	chrX	protein_coding	X-linked lymphocyte-regulated 4B
chrX	72258063	72258380	+	72258191	72258380	A5SS	0.33	50	50	ENSMUST00000069103.11	ENSMUSG00000067768.13	Xlr4b	chrX	protein_coding	X-linked lymphocyte-regulated 4B
chrX	72285801	72286220	-	72285788	72286220	A3SS	0.5	50	50	ENSMUST00000068551.9	ENSMUSG00000031362.18	Xlr4c	chrX	protein_coding	X-linked lymphocyte-regulated 4C
chrX	72285788	72286184	-	72285788	72286220	A5SS	0.5	50	50	ENSMUST00000068551.9	ENSMUSG00000031362.18	Xlr4c	chrX	protein_coding	X-linked lymphocyte-regulated 4C
chrX	72285801	72286184	-	72285788	72286184	A3SS	0.5	50	50	ENSMUST00000114531.8	ENSMUSG00000031362.18	Xlr4c	chrX	protein_coding	X-linked lymphocyte-regulated 4C
chrX	72285801	72286220	-	72285801	72286184	A5SS	0.5	50	50	ENSMUST00000114530.8	ENSMUSG00000031362.18	Xlr4c	chrX	protein_coding	X-linked lymphocyte-regulated 4C
chrX	72388518;72394966	72394875;72395415	+	72388518	72395415	cassetteExon	0.5	100	100	ENSMUST00000114499.8	ENSMUSG00000031365.14	Zfp275	chrX	protein_coding	zinc finger protein 275
chrX	72492508	72496605	-	72490743	72496605	A3SS	0.5	50	50	ENSMUST00000077243.5	ENSMUSG00000031371.15	Haus7	chrX	protein_coding	HAUS augmin-like complex, subunit 7
chrX	72490743	72491566	-	72490743	72496605	A5SS	0.5	50	50	ENSMUST00000077243.5	ENSMUSG00000031371.15	Haus7	chrX	protein_coding	HAUS augmin-like complex, subunit 7
chrX	72527368	72534385	+	72527368;72533537	72533474;72534385	ES	0.5	50	50	ENSMUST00000133394.8	ENSMUSG00000031375.18	Bgn	chrX	protein_coding	biglycan
chrX	72536439	72536530	+	72536439	72536569	A3SS	0.5	50	50	ENSMUST00000033741.15	ENSMUSG00000031375.18	Bgn	chrX	protein_coding	biglycan
chrX	72598841	72603470	+	72598841	72601638	3pMXE	0.33	50	50	ENSMUST00000033744.12	ENSMUSG00000031376.16	Atp2b3	chrX	protein_coding	ATPase, Ca++ transporting, plasma membrane 3
chrX	72598841	72613840	+	72598841	72601638	3pMXE	0.33	50	50	ENSMUST00000033744.12	ENSMUSG00000031376.16	Atp2b3	chrX	protein_coding	ATPase, Ca++ transporting, plasma membrane 3
chrX	72598841;72603623	72603470;72613840	+	72598841	72613840	cassetteExon	0.5	100	100	ENSMUST00000088429.8	ENSMUSG00000031376.16	Atp2b3	chrX	protein_coding	ATPase, Ca++ transporting, plasma membrane 3
chrX	72702855	72703333	-	72702855	72703273	5pMXE	0.33	50	50	ENSMUST00000114473.8	ENSMUSG00000002012.14	Pnck	chrX	protein_coding	pregnancy upregulated non-ubiquitously expressed CaM kinase
chrX	72702855	72703625	-	72702855	72703273	5pMXE	0.33	50	50	ENSMUST00000114473.8	ENSMUSG00000002012.14	Pnck	chrX	protein_coding	pregnancy upregulated non-ubiquitously expressed CaM kinase
chrX	72702855	72703625	-	72702855	72703333	5pMXE	0.33	50	50	ENSMUST00000002087.14	ENSMUSG00000002012.14	Pnck	chrX	protein_coding	pregnancy upregulated non-ubiquitously expressed CaM kinase
chrX	72722575	72722700	+	72722575	72722670	A3SS	0.5	50	50	ENSMUST00000033752.14	ENSMUSG00000019558.15	Slc6a8	chrX	protein_coding	solute carrier family 6 (neurotransmitter transporter, creatine), member 8
chrX	72723403	72723532	+	72723403	72723525	A3SS	0.5	50	50	ENSMUST00000033752.14	ENSMUSG00000019558.15	Slc6a8	chrX	protein_coding	solute carrier family 6 (neurotransmitter transporter, creatine), member 8
chrX	72720514	72720927	+	72720505	72720927	A5SS	0.5	50	50	ENSMUST00000033752.14	ENSMUSG00000019558.15	Slc6a8	chrX	protein_coding	solute carrier family 6 (neurotransmitter transporter, creatine), member 8
chrX	72723653	72723738	+	72723677	72723738	A5SS	0.33	50	50	ENSMUST00000033752.14	ENSMUSG00000019558.15	Slc6a8	chrX	protein_coding	solute carrier family 6 (neurotransmitter transporter, creatine), member 8
chrX	72723662	72723738	+	72723677	72723738	A5SS	0.33	50	50	ENSMUST00000033752.14	ENSMUSG00000019558.15	Slc6a8	chrX	protein_coding	solute carrier family 6 (neurotransmitter transporter, creatine), member 8
chrX	72723653	72723738	+	72723662	72723738	A5SS	0.33	50	50	ENSMUST00000114467.9	ENSMUSG00000019558.15	Slc6a8	chrX	protein_coding	solute carrier family 6 (neurotransmitter transporter, creatine), member 8
chrX	72800756	72803500	+	72800756;72803189	72802129;72803500	ES	0.5	50	50	ENSMUST00000149478.8	ENSMUSG00000031385.15	Plxnb3	chrX	protein_coding	plexin B3
chrX	72806628	72806966	+	72806628;72806883	72806758;72806966	ES	0.5	50	50	ENSMUST00000149478.8	ENSMUSG00000031385.15	Plxnb3	chrX	protein_coding	plexin B3
chrX	72807753	72808873	+	72807753;72808119	72807968;72808873	ES	0.5	50	50	ENSMUST00000149478.8	ENSMUSG00000031385.15	Plxnb3	chrX	protein_coding	plexin B3
chrX	72813067	72813396	+	72813067;72813311	72813208;72813396	ES	0.5	50	50	ENSMUST00000149478.8	ENSMUSG00000031385.15	Plxnb3	chrX	protein_coding	plexin B3
chrX	72800756	72803062	+	72800756	72802129	A3SS	0.33	50	50	ENSMUST00000149478.8	ENSMUSG00000031385.15	Plxnb3	chrX	protein_coding	plexin B3
chrX	72809228	72809611	+	72808978	72809611	A5SS	0.5	50	50	ENSMUST00000149478.8	ENSMUSG00000031385.15	Plxnb3	chrX	protein_coding	plexin B3
chrX	72800756;72803189	72803062;72803500	+	72800756	72803500	cassetteExon	0.5	100	100	ENSMUST00000146812.8	ENSMUSG00000031385.15	Plxnb3	chrX	protein_coding	plexin B3
chrX	72800756	72802129	+	72800756	72803500	A3SS	0.33	50	50	ENSMUST00000146812.8	ENSMUSG00000031385.15	Plxnb3	chrX	protein_coding	plexin B3
chrX	72813067	72813396	+	72813067	72813208	3pMXE	0.5	50	50	ENSMUST00000155096.2	ENSMUSG00000031385.15	Plxnb3	chrX	protein_coding	plexin B3
chrX	72825709	72826281	-	72825709;72825915	72825904;72826281	ES	0.5	50	50	ENSMUST00000052761.9	ENSMUSG00000002010.18	Idh3g	chrX	protein_coding	isocitrate dehydrogenase 3 (NAD+), gamma
chrX	72826322	72830134	-	72826322	72830381	A5SS	0.5	50	50	ENSMUST00000052761.9	ENSMUSG00000002010.18	Idh3g	chrX	protein_coding	isocitrate dehydrogenase 3 (NAD+), gamma
chrX	72825709	72826281	-	72825709	72825904	5pMXE	0.5	50	50	ENSMUST00000145341.2	ENSMUSG00000002010.18	Idh3g	chrX	protein_coding	isocitrate dehydrogenase 3 (NAD+), gamma
chrX	72830912	72832444	+	72830912	72832441	A3SS	0.5	50	50	ENSMUST00000166518.8	ENSMUSG00000002014.13	Ssr4	chrX	protein_coding	signal sequence receptor, delta
chrX	72843693	72867888	-	72841898	72867888	A3SS	0.5	50	50	ENSMUST00000114438.3	ENSMUSG00000002006.13	Pdzd4	chrX	protein_coding	PDZ domain containing 4
chrX	72841898	72842364	-	72841898	72867888	A5SS	0.5	50	50	ENSMUST00000114438.3	ENSMUSG00000002006.13	Pdzd4	chrX	protein_coding	PDZ domain containing 4
chrX	72899437	72900238	-	72899437;72899886	72899749;72900238	ES	0.5	50	50	ENSMUST00000114430.8	ENSMUSG00000031391.19	L1cam	chrX	protein_coding	L1 cell adhesion molecule
chrX	72903822	72904326	-	72903822;72904155	72904045;72904326	ES	0.5	50	50	ENSMUST00000114430.8	ENSMUSG00000031391.19	L1cam	chrX	protein_coding	L1 cell adhesion molecule
chrX	72909766	72913335	-	72909766;72910642	72910628;72913335	ES	0.5	50	50	ENSMUST00000114430.8	ENSMUSG00000031391.19	L1cam	chrX	protein_coding	L1 cell adhesion molecule
chrX	72898872;72899269	72899258;72899365	-	72898872	72899365	cassetteExon	0.5	100	100	ENSMUST00000114430.8	ENSMUSG00000031391.19	L1cam	chrX	protein_coding	L1 cell adhesion molecule
chrX	72913522	72939554	-	72913522	72924300	5pMXE	0.33	50	50	ENSMUST00000102871.10	ENSMUSG00000031391.19	L1cam	chrX	protein_coding	L1 cell adhesion molecule
chrX	72913522	72913678	-	72913522	72924300	A5SS	0.33	50	50	ENSMUST00000102871.10	ENSMUSG00000031391.19	L1cam	chrX	protein_coding	L1 cell adhesion molecule
chrX	72899437	72900238	-	72899437	72899749	5pMXE	0.5	50	50	ENSMUST00000144478.2	ENSMUSG00000031391.19	L1cam	chrX	protein_coding	L1 cell adhesion molecule
chrX	72938569	72939554	-	72913522	72939554	A3SS	0.5	50	50	ENSMUST00000141221.2	ENSMUSG00000031391.19	L1cam	chrX	protein_coding	L1 cell adhesion molecule
chrX	72913522	72913678	-	72913522	72939554	A5SS	0.33	50	50	ENSMUST00000141221.2	ENSMUSG00000031391.19	L1cam	chrX	protein_coding	L1 cell adhesion molecule
chrX	72940760	72941159	-	72940760;72941068	72940835;72941159	ES	0.5	50	50	ENSMUST00000114405.8	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72941494	72941738	-	72941494;72941652	72941575;72941738	ES	0.33	50	50	ENSMUST00000114405.8	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72950482	72963108	-	72950482	72954769	5pMXE	0.33	50	50	ENSMUST00000114405.8	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72940598	72940687	-	72940603	72940687	A3SS	0.5	50	50	ENSMUST00000114405.8	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72941619	72941738	-	72941652	72941738	A3SS	0.33	50	50	ENSMUST00000114405.8	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72943080	72943451	-	72943249	72943451	A3SS&ES	0.5	50	50	ENSMUST00000114405.8	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72943991	72944241	-	72944075	72944241	A3SS	0.5	50	50	ENSMUST00000114405.8	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72949469	72949763	-	72949499	72949763	A3SS	0.33	50	50	ENSMUST00000114405.8	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72949469	72950035	-	72949825	72950035	A3SS&ES	0.33	50	50	ENSMUST00000114405.8	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72950494	72954769	-	72950482	72954769	A3SS	0.33	50	50	ENSMUST00000114405.8	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72953941	72954769	-	72950482	72954769	A3SS	0.33	50	50	ENSMUST00000114405.8	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72939653	72939991	-	72939653	72940000	A5SS	0.5	50	50	ENSMUST00000114405.8	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72944342	72950036	-	72944342	72947854	A5SS&ES	0.33	50	50	ENSMUST00000114405.8	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72950482	72951760	-	72950482	72954769	A5SS	0.33	50	50	ENSMUST00000114405.8	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72949469	72950035	-	72949469;72949825	72949763;72950035	ES	0.33	50	50	ENSMUST00000064376.13	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72944342;72948075	72947854;72950035	-	72944342;72949825	72949763;72950035	MXE	0.5	100	100	ENSMUST00000114406.9	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72949469	72949763	-	72944342	72949763	A3SS	0.33	50	50	ENSMUST00000114406.9	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72949499	72949763	-	72944342	72949763	A3SS	0.33	50	50	ENSMUST00000114406.9	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72944342	72950036	-	72944342	72949763	A5SS&ES	0.33	50	50	ENSMUST00000114406.9	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72944342;72949825	72949763;72950035	-	72944342;72949469	72947854;72950035	MXE	0.5	100	100	ENSMUST00000148319.8	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72949469	72950035	-	72948075	72950035	A3SS	0.33	50	50	ENSMUST00000151600.8	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72948075	72948186	-	72948075	72950035	A5SS	0.5	50	50	ENSMUST00000151600.8	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72940760;72941264	72940835;72941360	-	72940760	72941360	cassetteExon	0.5	100	100	ENSMUST00000140393.8	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72940760;72941264	72941159;72941360	-	72940760	72941360	cassetteExon	0.5	100	100	ENSMUST00000140393.8	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72941494;72941619	72941575;72941738	-	72941494	72941738	cassetteExon	0.5	100	100	ENSMUST00000140393.8	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72940760	72941159	-	72940760	72940835	5pMXE	0.33	50	50	ENSMUST00000142925.2	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72940760	72941360	-	72940760	72940835	5pMXE	0.33	50	50	ENSMUST00000142925.2	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72941494	72941738	-	72941494	72941575	5pMXE	0.5	50	50	ENSMUST00000143696.8	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72961533	72963108	-	72950482	72963108	A3SS	0.33	50	50	ENSMUST00000128329.2	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72961533	72963360	-	72963152	72963360	A3SS&ES	0.33	50	50	ENSMUST00000128329.2	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72961558	72963108	-	72950482	72963108	A3SS	0.33	50	50	ENSMUST00000128329.2	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72963146	72963360	-	72963152	72963360	A3SS	0.33	50	50	ENSMUST00000128329.2	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72950482	72951760	-	72950482	72963108	A5SS	0.33	50	50	ENSMUST00000128329.2	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72953941	72954769	-	72950494	72954769	A3SS	0.33	50	50	ENSMUST00000149135.2	ENSMUSG00000031389.18	Arhgap4	chrX	protein_coding	Rho GTPase activating protein 4
chrX	72935874	72936233	+	72935874	72936230	A3SS	0.25	50	50	ENSMUST00000033765.8	ENSMUSG00000031390.9	Avpr2	chrX	protein_coding	arginine vasopressin receptor 2
chrX	72935874	72936717	+	72935874	72936230	A3SS	0.25	50	50	ENSMUST00000033765.8	ENSMUSG00000031390.9	Avpr2	chrX	protein_coding	arginine vasopressin receptor 2
chrX	72935874	72936863	+	72935874	72936230	A3SS	0.25	50	50	ENSMUST00000033765.8	ENSMUSG00000031390.9	Avpr2	chrX	protein_coding	arginine vasopressin receptor 2
chrX	72937026	72937275	+	72937114	72937275	A5SS	0.5	50	50	ENSMUST00000033765.8	ENSMUSG00000031390.9	Avpr2	chrX	protein_coding	arginine vasopressin receptor 2
chrX	72935874	72936233	+	72935874	72936717	A3SS	0.25	50	50	ENSMUST00000131088.2	ENSMUSG00000031390.9	Avpr2	chrX	protein_coding	arginine vasopressin receptor 2
chrX	72935874	72936863	+	72935874	72936717	A3SS	0.25	50	50	ENSMUST00000131088.2	ENSMUSG00000031390.9	Avpr2	chrX	protein_coding	arginine vasopressin receptor 2
chrX	72935874	72936863	+	72935874	72936233	A3SS	0.25	50	50	ENSMUST00000101470.3	ENSMUSG00000031390.9	Avpr2	chrX	protein_coding	arginine vasopressin receptor 2
chrX	72961533	72963360	-	72961533;72963146	72963108;72963360	ES	0.33	50	50	ENSMUST00000139105.8	ENSMUSG00000031388.15	Naa10	chrX	protein_coding	N(alpha)-acetyltransferase 10, NatA catalytic subunit
chrX	72960801	72961449	-	72960796	72961449	A3SS	0.25	50	50	ENSMUST00000139105.8	ENSMUSG00000031388.15	Naa10	chrX	protein_coding	N(alpha)-acetyltransferase 10, NatA catalytic subunit
chrX	72960888	72961449	-	72960796	72961449	A3SS	0.25	50	50	ENSMUST00000139105.8	ENSMUSG00000031388.15	Naa10	chrX	protein_coding	N(alpha)-acetyltransferase 10, NatA catalytic subunit
chrX	72960892	72961449	-	72960796	72961449	A3SS	0.25	50	50	ENSMUST00000139105.8	ENSMUSG00000031388.15	Naa10	chrX	protein_coding	N(alpha)-acetyltransferase 10, NatA catalytic subunit
chrX	72961558	72963108	-	72961533	72963108	A3SS	0.5	50	50	ENSMUST00000139105.8	ENSMUSG00000031388.15	Naa10	chrX	protein_coding	N(alpha)-acetyltransferase 10, NatA catalytic subunit
chrX	72961533	72963360	-	72961533;72963152	72963108;72963360	ES	0.33	50	50	ENSMUST00000033763.15	ENSMUSG00000031388.15	Naa10	chrX	protein_coding	N(alpha)-acetyltransferase 10, NatA catalytic subunit
chrX	72960888	72961449	-	72960801	72961449	A3SS	0.25	50	50	ENSMUST00000033763.15	ENSMUSG00000031388.15	Naa10	chrX	protein_coding	N(alpha)-acetyltransferase 10, NatA catalytic subunit
chrX	72960892	72961449	-	72960801	72961449	A3SS	0.25	50	50	ENSMUST00000033763.15	ENSMUSG00000031388.15	Naa10	chrX	protein_coding	N(alpha)-acetyltransferase 10, NatA catalytic subunit
chrX	72960888	72961449	-	72960892	72961449	A3SS	0.25	50	50	ENSMUST00000114389.10	ENSMUSG00000031388.15	Naa10	chrX	protein_coding	N(alpha)-acetyltransferase 10, NatA catalytic subunit
chrX	72973686	72974014	-	72973686;72973868	72973835;72974014	ES	0.33	50	50	ENSMUST00000114379.8	ENSMUSG00000031387.15	Renbp	chrX	protein_coding	renin binding protein
chrX	72969012	72969822	-	72966044	72969822	A3SS	0.5	50	50	ENSMUST00000114379.8	ENSMUSG00000031387.15	Renbp	chrX	protein_coding	renin binding protein
chrX	72973686	72973793	-	72973686	72973835	A5SS	0.33	50	50	ENSMUST00000114379.8	ENSMUSG00000031387.15	Renbp	chrX	protein_coding	renin binding protein
chrX	72974123	72974316	-	72974123	72974320	A5SS	0.5	50	50	ENSMUST00000114379.8	ENSMUSG00000031387.15	Renbp	chrX	protein_coding	renin binding protein
chrX	72973686	72974014	-	72973686;72973868	72973793;72974014	ES	0.33	50	50	ENSMUST00000116578.8	ENSMUSG00000031387.15	Renbp	chrX	protein_coding	renin binding protein
chrX	72973459	72974014	-	72973868	72974014	A3SS	0.33	50	50	ENSMUST00000146371.8	ENSMUSG00000031387.15	Renbp	chrX	protein_coding	renin binding protein
chrX	72973686	72974014	-	72973868	72974014	A3SS	0.33	50	50	ENSMUST00000146371.8	ENSMUSG00000031387.15	Renbp	chrX	protein_coding	renin binding protein
chrX	72973459;72973686	72973611;72974014	-	72973459	72974014	cassetteExon	0.5	100	100	ENSMUST00000165359.3	ENSMUSG00000031387.15	Renbp	chrX	protein_coding	renin binding protein
chrX	72973459;72973868	72973611;72974014	-	72973459	72974014	cassetteExon	0.5	100	100	ENSMUST00000165359.3	ENSMUSG00000031387.15	Renbp	chrX	protein_coding	renin binding protein
chrX	72999240	73000993	-	72999240;73000279	73000173;73000993	ES	0.5	50	50	ENSMUST00000033761.13	ENSMUSG00000031386.15	Hcfc1	chrX	protein_coding	host cell factor C1
chrX	72991123	72991448	-	72991120	72991448	A3SS	0.5	50	50	ENSMUST00000033761.13	ENSMUSG00000031386.15	Hcfc1	chrX	protein_coding	host cell factor C1
chrX	72992024	72992508	-	72991892	72992508	A3SS	0.5	50	50	ENSMUST00000033761.13	ENSMUSG00000031386.15	Hcfc1	chrX	protein_coding	host cell factor C1
chrX	73059107	73060736	-	73059107;73060303	73060154;73060736	ES	0.5	50	50	ENSMUST00000114354.10	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73060303	73061736	-	73060303;73061117	73060736;73061736	ES	0.25	50	50	ENSMUST00000114354.10	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73061117	73063506	-	73061117;73061972	73061736;73063506	ES	0.33	50	50	ENSMUST00000114354.10	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73061972	73063934	-	73061972;73063571	73063506;73063934	ES	0.5	50	50	ENSMUST00000114354.10	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73064667	73065791	-	73064667;73065569	73065455;73065791	ES	0.5	50	50	ENSMUST00000114354.10	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73061117;73061623	73061507;73061736	-	73061117	73061736	cassetteExon	0.5	100	100	ENSMUST00000114354.10	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73057731	73060154	-	73059107	73060154	A3SS	0.5	50	50	ENSMUST00000114354.10	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73061036	73061736	-	73061117	73061736	A3SS	0.25	50	50	ENSMUST00000114354.10	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73061036	73063506	-	73061972	73063506	A3SS&ES	0.33	50	50	ENSMUST00000114354.10	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73065987	73066079	-	73065855	73066079	A3SS	0.33	50	50	ENSMUST00000114354.10	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73066267	73066455	-	73066270	73066455	A3SS	0.5	50	50	ENSMUST00000114354.10	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73057731	73060154	-	73057731;73059107	73059012;73060154	ES	0.5	50	50	ENSMUST00000068286.12	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73057731;73059107	73059012;73060736	-	73057731;73060303	73060154;73060736	MXE	0.5	100	100	ENSMUST00000114360.10	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73064667	73066079	-	73064667;73065855	73065791;73066079	ES	0.33	50	50	ENSMUST00000148706.8	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73060303	73061736	-	73060303;73061036	73060736;73061736	ES	0.25	50	50	ENSMUST00000149871.8	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73061036	73063506	-	73061036;73061972	73061736;73063506	ES	0.33	50	50	ENSMUST00000149871.8	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73061117	73063506	-	73061972	73063506	A3SS&ES	0.33	50	50	ENSMUST00000149871.8	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73061623	73061736	-	73061036	73061736	A3SS	0.25	50	50	ENSMUST00000149871.8	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73061117	73063506	-	73061117	73061736	5pMXE	0.33	50	50	ENSMUST00000148317.8	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73059107;73060303	73060154;73061736	-	73059107;73061117	73060736;73061736	MXE	0.5	100	100	ENSMUST00000148317.8	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73061972	73063934	-	73061972	73063506	5pMXE	0.5	50	50	ENSMUST00000128436.8	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73059107;73061036	73060736;73061736	-	73059107;73060303	73060154;73061736	MXE	0.5	100	100	ENSMUST00000128436.8	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73059107;73061036	73060736;73063506	-	73059107;73061972	73060154;73063506	MXE	0.5	100	100	ENSMUST00000128436.8	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73060303;73061036	73060736;73063506	-	73060303;73061972	73061736;73063506	MXE	0.5	100	100	ENSMUST00000128436.8	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73059107;73061117	73060736;73063506	-	73059107;73061972	73060154;73063506	MXE	0.5	100	100	ENSMUST00000128436.8	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73060303;73061117	73060736;73063506	-	73060303;73061972	73061736;73063506	MXE	0.5	100	100	ENSMUST00000128436.8	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73061623	73061736	-	73060303	73061736	A3SS	0.25	50	50	ENSMUST00000128436.8	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73061117;73061972	73061507;73063506	-	73061117	73063506	cassetteExon	0.5	100	100	ENSMUST00000114353.10	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73060303;73061972	73061736;73063934	-	73060303;73063571	73060736;73063934	MXE	0.5	100	100	ENSMUST00000114353.10	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73061117;73061972	73061507;73063934	-	73061117;73063571	73063506;73063934	MXE	0.5	100	100	ENSMUST00000114353.10	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73061117;73061972	73061736;73063934	-	73061117;73063571	73063506;73063934	MXE	0.5	100	100	ENSMUST00000114353.10	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73061036	73063506	-	73061117	73063506	A3SS	0.33	50	50	ENSMUST00000114353.10	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73059107	73060736	-	73060303	73060736	3pMXE	0.5	50	50	ENSMUST00000138397.8	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73061036;73061972	73061736;73063934	-	73061036;73063571	73063506;73063934	MXE	0.5	100	100	ENSMUST00000138397.8	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73060303	73061736	-	73061117	73061736	3pMXE	0.25	50	50	ENSMUST00000126583.3	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73064667	73066079	-	73064667	73065455	A5SS&ES	0.33	50	50	ENSMUST00000140130.2	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73064667;73065855	73065455;73066079	-	73064667	73066079	cassetteExon	0.5	100	100	ENSMUST00000132144.8	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73064667;73065987	73065791;73066079	-	73064667	73066079	cassetteExon	0.5	100	100	ENSMUST00000132144.8	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73064667	73066079	-	73065987	73066079	3pMXE	0.33	50	50	ENSMUST00000124580.2	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73064667	73066079	-	73065855	73066079	3pMXE	0.33	50	50	ENSMUST00000149809.8	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73066803	73066972	-	73066671	73066972	A3SS	0.5	50	50	ENSMUST00000149809.8	ENSMUSG00000031392.19	Irak1	chrX	protein_coding	interleukin-1 receptor-associated kinase 1
chrX	73080938	73129116	-	73080938;73123638	73123515;73129116	ES	0.5	50	50	ENSMUST00000100750.10	ENSMUSG00000031393.17	Mecp2	chrX	protein_coding	methyl CpG binding protein 2
chrX	73123638	73178937	-	73123638	73129116	5pMXE	0.5	50	50	ENSMUST00000100750.10	ENSMUSG00000031393.17	Mecp2	chrX	protein_coding	methyl CpG binding protein 2
chrX	73080938	73129116	-	73080938	73123515	A5SS&ES	0.5	50	50	ENSMUST00000170481.9	ENSMUSG00000031393.17	Mecp2	chrX	protein_coding	methyl CpG binding protein 2
chrX	73182193	73187052	+	73182193;73183574	73183409;73187052	ES	0.5	50	50	ENSMUST00000033771.11	ENSMUSG00000031394.12	Opn1mw	chrX	protein_coding	opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan)
chrX	73187291;73188174	73188158;73194152	+	73187291	73194152	cassetteExon	0.5	100	100	ENSMUST00000033771.11	ENSMUSG00000031394.12	Opn1mw	chrX	protein_coding	opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan)
chrX	73181826	73182025	+	73176616	73182025	A5SS	0.5	50	50	ENSMUST00000033771.11	ENSMUSG00000031394.12	Opn1mw	chrX	protein_coding	opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan)
chrX	73187102	73194152	+	73187291	73194152	A5SS	0.33	50	50	ENSMUST00000033771.11	ENSMUSG00000031394.12	Opn1mw	chrX	protein_coding	opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan)
chrX	73187102	73194152	+	73188174	73194152	A5SS&ES	0.33	50	50	ENSMUST00000101457.10	ENSMUSG00000031394.12	Opn1mw	chrX	protein_coding	opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan)
chrX	73182193	73187052	+	73182193	73183409	3pMXE	0.5	50	50	ENSMUST00000145443.2	ENSMUSG00000031394.12	Opn1mw	chrX	protein_coding	opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan)
chrX	73234885	73237400	+	73237316	73237400	A5SS&ES	0.5	50	50	ENSMUST00000010127.12	ENSMUSG00000031397.12	Tktl1	chrX	protein_coding	transketolase-like 1
chrX	73271363	73271692	-	73271363;73271580	73271458;73271692	ES	0.5	50	50	ENSMUST00000144429.8	ENSMUSG00000031328.17	Flna	chrX	protein_coding	filamin, alpha
chrX	73272527	73272987	-	73272527;73272798	73272625;73272987	ES	0.5	50	50	ENSMUST00000144429.8	ENSMUSG00000031328.17	Flna	chrX	protein_coding	filamin, alpha
chrX	73273764	73274112	-	73273764;73274002	73273907;73274112	ES	0.5	50	50	ENSMUST00000144429.8	ENSMUSG00000031328.17	Flna	chrX	protein_coding	filamin, alpha
chrX	73274359	73276755	-	73274359;73276596	73276573;73276755	ES	0.5	50	50	ENSMUST00000144429.8	ENSMUSG00000031328.17	Flna	chrX	protein_coding	filamin, alpha
chrX	73284156;73284478	73284422;73284709	-	73284156	73284709	cassetteExon	0.5	100	100	ENSMUST00000144429.8	ENSMUSG00000031328.17	Flna	chrX	protein_coding	filamin, alpha
chrX	73272147	73272366	-	73272130	73272366	A3SS	0.5	50	50	ENSMUST00000144429.8	ENSMUSG00000031328.17	Flna	chrX	protein_coding	filamin, alpha
chrX	73276868	73278962	-	73278878	73278962	A3SS&ES	0.5	50	50	ENSMUST00000144429.8	ENSMUSG00000031328.17	Flna	chrX	protein_coding	filamin, alpha
chrX	73283934	73284019	-	73283932	73284019	A3SS	0.5	50	50	ENSMUST00000144429.8	ENSMUSG00000031328.17	Flna	chrX	protein_coding	filamin, alpha
chrX	73269940	73270023	-	73269940	73270467	A5SS	0.5	50	50	ENSMUST00000144429.8	ENSMUSG00000031328.17	Flna	chrX	protein_coding	filamin, alpha
chrX	73271363	73271692	-	73271363	73271458	5pMXE	0.5	50	50	ENSMUST00000133609.2	ENSMUSG00000031328.17	Flna	chrX	protein_coding	filamin, alpha
chrX	73271363	73271692	-	73271580	73271692	3pMXE	0.5	50	50	ENSMUST00000127924.8	ENSMUSG00000031328.17	Flna	chrX	protein_coding	filamin, alpha
chrX	73272527	73272987	-	73272527	73272625	5pMXE	0.5	50	50	ENSMUST00000127924.8	ENSMUSG00000031328.17	Flna	chrX	protein_coding	filamin, alpha
chrX	73298639	73299059	+	73298639;73298921	73298814;73299059	ES	0.5	50	50	ENSMUST00000002029.13	ENSMUSG00000001964.15	Emd	chrX	protein_coding	emerin
chrX	73300530	73304388	+	73300530	73300613	3pMXE	0.5	50	50	ENSMUST00000002029.13	ENSMUSG00000001964.15	Emd	chrX	protein_coding	emerin
chrX	73298610	73298814	+	73298639	73298814	A5SS	0.5	50	50	ENSMUST00000002029.13	ENSMUSG00000001964.15	Emd	chrX	protein_coding	emerin
chrX	73299482;73300530	73300484;73304388	+	73299482	73304388	cassetteExon	0.5	100	100	ENSMUST00000119197.8	ENSMUSG00000001964.15	Emd	chrX	protein_coding	emerin
chrX	73298639	73299059	+	73298921	73299059	A5SS&ES	0.5	50	50	ENSMUST00000152288.2	ENSMUSG00000001964.15	Emd	chrX	protein_coding	emerin
chrX	73315923	73316521	+	73315923;73316440	73316278;73316521	ES	0.5	50	50	ENSMUST00000008826.14	ENSMUSG00000008682.14	Rpl10	chrX	protein_coding	ribosomal protein L10
chrX	73314630	73314967	+	73314630	73315266	A3SS	0.5	50	50	ENSMUST00000008826.14	ENSMUSG00000008682.14	Rpl10	chrX	protein_coding	ribosomal protein L10
chrX	73314484	73314585	+	73314480	73314585	A5SS	0.5	50	50	ENSMUST00000008826.14	ENSMUSG00000008682.14	Rpl10	chrX	protein_coding	ribosomal protein L10
chrX	73315923	73316521	+	73315923	73316278	3pMXE	0.5	50	50	ENSMUST00000149171.8	ENSMUSG00000008682.14	Rpl10	chrX	protein_coding	ribosomal protein L10
chrX	73320948	73325841	-	73320948	73325127	5pMXE	0.5	50	50	ENSMUST00000239458.2	ENSMUSG00000019088.15	Dnase1l1	chrX	protein_coding	deoxyribonuclease 1-like 1
chrX	73317297;73317632	73317384;73320645	-	73317297	73320645	cassetteExon	0.5	100	100	ENSMUST00000114189.10	ENSMUSG00000019088.15	Dnase1l1	chrX	protein_coding	deoxyribonuclease 1-like 1
chrX	73320340	73320645	-	73317297	73320645	A3SS	0.33	50	50	ENSMUST00000114189.10	ENSMUSG00000019088.15	Dnase1l1	chrX	protein_coding	deoxyribonuclease 1-like 1
chrX	73317297	73320645	-	73317632	73320645	3pMXE	0.33	50	50	ENSMUST00000119361.4	ENSMUSG00000019088.15	Dnase1l1	chrX	protein_coding	deoxyribonuclease 1-like 1
chrX	73320340	73320645	-	73317632	73320645	A3SS	0.33	50	50	ENSMUST00000119361.4	ENSMUSG00000019088.15	Dnase1l1	chrX	protein_coding	deoxyribonuclease 1-like 1
chrX	73317632	73317712	-	73317632	73320645	A5SS	0.5	50	50	ENSMUST00000119361.4	ENSMUSG00000019088.15	Dnase1l1	chrX	protein_coding	deoxyribonuclease 1-like 1
chrX	73325651	73326324	+	73325646	73326324	A5SS	0.5	50	50	ENSMUST00000146260.2	ENSMUSG00000009995.18	Taz	chrX	protein_coding	tafazzin
chrX	73327623	73331784	+	73327623;73331705	73331625;73331784	ES	0.5	50	50	ENSMUST00000069722.13	ENSMUSG00000009995.18	Taz	chrX	protein_coding	tafazzin
chrX	73331705	73332057	+	73331705;73331825	73331784;73332057	ES	0.33	50	50	ENSMUST00000069722.13	ENSMUSG00000009995.18	Taz	chrX	protein_coding	tafazzin
chrX	73332119	73332711	+	73332119;73332320	73332268;73332711	ES	0.33	50	50	ENSMUST00000069722.13	ENSMUSG00000009995.18	Taz	chrX	protein_coding	tafazzin
chrX	73332119;73332625	73332535;73332711	+	73332119;73332320	73332268;73332711	MXE	0.5	100	100	ENSMUST00000069722.13	ENSMUSG00000009995.18	Taz	chrX	protein_coding	tafazzin
chrX	73332320;73332625	73332535;73332711	+	73332320	73332711	cassetteExon	0.5	100	100	ENSMUST00000069722.13	ENSMUSG00000009995.18	Taz	chrX	protein_coding	tafazzin
chrX	73332320;73332625	73332590;73332711	+	73332320	73332711	cassetteExon	0.5	100	100	ENSMUST00000069722.13	ENSMUSG00000009995.18	Taz	chrX	protein_coding	tafazzin
chrX	73327623	73331628	+	73327623	73331625	A3SS	0.33	50	50	ENSMUST00000069722.13	ENSMUSG00000009995.18	Taz	chrX	protein_coding	tafazzin
chrX	73331825	73332054	+	73331825	73332057	A3SS	0.5	50	50	ENSMUST00000069722.13	ENSMUSG00000009995.18	Taz	chrX	protein_coding	tafazzin
chrX	73331945	73332057	+	73331825	73332057	A5SS	0.33	50	50	ENSMUST00000069722.13	ENSMUSG00000009995.18	Taz	chrX	protein_coding	tafazzin
chrX	73327623	73331784	+	73327623	73331625	3pMXE	0.33	50	50	ENSMUST00000156880.8	ENSMUSG00000009995.18	Taz	chrX	protein_coding	tafazzin
chrX	73332119;73332625	73332268;73332711	+	73332119	73332711	cassetteExon	0.5	100	100	ENSMUST00000124200.8	ENSMUSG00000009995.18	Taz	chrX	protein_coding	tafazzin
chrX	73332119;73332625	73332535;73332711	+	73332119	73332711	cassetteExon	0.5	100	100	ENSMUST00000124200.8	ENSMUSG00000009995.18	Taz	chrX	protein_coding	tafazzin
chrX	73331705	73332057	+	73331705;73331945	73331784;73332057	ES	0.33	50	50	ENSMUST00000156212.8	ENSMUSG00000009995.18	Taz	chrX	protein_coding	tafazzin
chrX	73332119	73332711	+	73332625	73332711	A5SS	0.33	50	50	ENSMUST00000156212.8	ENSMUSG00000009995.18	Taz	chrX	protein_coding	tafazzin
chrX	73332320	73332711	+	73332625	73332711	A5SS	0.33	50	50	ENSMUST00000156212.8	ENSMUSG00000009995.18	Taz	chrX	protein_coding	tafazzin
chrX	73332119	73332535	+	73332119	73332268	3pMXE	0.33	50	50	ENSMUST00000134936.9	ENSMUSG00000009995.18	Taz	chrX	protein_coding	tafazzin
chrX	73332119	73332711	+	73332119	73332268	3pMXE	0.33	50	50	ENSMUST00000134936.9	ENSMUSG00000009995.18	Taz	chrX	protein_coding	tafazzin
chrX	73331705	73332057	+	73331705	73331784	A3SS	0.5	50	50	ENSMUST00000134936.9	ENSMUSG00000009995.18	Taz	chrX	protein_coding	tafazzin
chrX	73327623;73331705	73331628;73331784	+	73327623	73331784	cassetteExon	0.5	100	100	ENSMUST00000132437.8	ENSMUSG00000009995.18	Taz	chrX	protein_coding	tafazzin
chrX	73327623;73331825	73331784;73332057	+	73327623;73331705	73331625;73332057	MXE	0.5	100	100	ENSMUST00000135504.9	ENSMUSG00000009995.18	Taz	chrX	protein_coding	tafazzin
chrX	73327623;73331945	73331784;73332057	+	73327623;73331705	73331625;73332057	MXE	0.5	100	100	ENSMUST00000135504.9	ENSMUSG00000009995.18	Taz	chrX	protein_coding	tafazzin
chrX	73327623	73331784	+	73331705	73331784	5pMXE	0.5	50	50	ENSMUST00000153459.2	ENSMUSG00000009995.18	Taz	chrX	protein_coding	tafazzin
chrX	73332119;73332320	73332268;73332535	+	73332119	73332535	cassetteExon	0.5	100	100	ENSMUST00000124915.8	ENSMUSG00000009995.18	Taz	chrX	protein_coding	tafazzin
chrX	73332320	73332535	+	73332320	73332590	A3SS	0.33	50	50	ENSMUST00000131116.8	ENSMUSG00000009995.18	Taz	chrX	protein_coding	tafazzin
chrX	73332119	73332535	+	73332320	73332535	5pMXE	0.5	50	50	ENSMUST00000134432.9	ENSMUSG00000009995.18	Taz	chrX	protein_coding	tafazzin
chrX	73341355;73342388	73342326;73343856	+	73341355	73343856	cassetteExon	0.5	100	100	ENSMUST00000019231.12	ENSMUSG00000019087.14	Atp6ap1	chrX	protein_coding	ATPase, H+ transporting, lysosomal accessory protein 1
chrX	73343930	73345567	+	73343930	73344184	A3SS&ES	0.5	50	50	ENSMUST00000019231.12	ENSMUSG00000019087.14	Atp6ap1	chrX	protein_coding	ATPase, H+ transporting, lysosomal accessory protein 1
chrX	73347192	73347253	+	73347192	73347403	A3SS	0.33	50	50	ENSMUST00000019231.12	ENSMUSG00000019087.14	Atp6ap1	chrX	protein_coding	ATPase, H+ transporting, lysosomal accessory protein 1
chrX	73347192	73347337	+	73347192	73347403	A3SS	0.33	50	50	ENSMUST00000019231.12	ENSMUSG00000019087.14	Atp6ap1	chrX	protein_coding	ATPase, H+ transporting, lysosomal accessory protein 1
chrX	73344294	73345968	+	73345627	73345968	A5SS&ES	0.5	50	50	ENSMUST00000019231.12	ENSMUSG00000019087.14	Atp6ap1	chrX	protein_coding	ATPase, H+ transporting, lysosomal accessory protein 1
chrX	73344964	73345542	+	73344970	73345542	A5SS	0.5	50	50	ENSMUST00000019231.12	ENSMUSG00000019087.14	Atp6ap1	chrX	protein_coding	ATPase, H+ transporting, lysosomal accessory protein 1
chrX	73343930;73345627	73345567;73345968	+	73343930;73344294	73344184;73345968	MXE	0.5	100	100	ENSMUST00000147275.8	ENSMUSG00000019087.14	Atp6ap1	chrX	protein_coding	ATPase, H+ transporting, lysosomal accessory protein 1
chrX	73347192	73347253	+	73347192	73347337	A3SS	0.33	50	50	ENSMUST00000114171.10	ENSMUSG00000019087.14	Atp6ap1	chrX	protein_coding	ATPase, H+ transporting, lysosomal accessory protein 1
chrX	73349047;73350091	73349949;73350185	+	73349047	73350185	cassetteExon	0.5	100	100	ENSMUST00000015435.11	ENSMUSG00000015291.11	Gdi1	chrX	protein_coding	guanosine diphosphate (GDP) dissociation inhibitor 1
chrX	73353740	73354086	+	73353740	73353996	A3SS	0.5	50	50	ENSMUST00000015435.11	ENSMUSG00000015291.11	Gdi1	chrX	protein_coding	guanosine diphosphate (GDP) dissociation inhibitor 1
chrX	73349703	73350185	+	73349047	73350185	A5SS	0.33	50	50	ENSMUST00000015435.11	ENSMUSG00000015291.11	Gdi1	chrX	protein_coding	guanosine diphosphate (GDP) dissociation inhibitor 1
chrX	73349703	73350185	+	73350091	73350185	A5SS&ES	0.33	50	50	ENSMUST00000153141.2	ENSMUSG00000015291.11	Gdi1	chrX	protein_coding	guanosine diphosphate (GDP) dissociation inhibitor 1
chrX	73372821	73374575	+	73372821	73375573	A3SS	0.5	50	50	ENSMUST00000136114.8	ENSMUSG00000031398.14	Plxna3	chrX	protein_coding	plexin A3
chrX	73375198	73375573	+	73372821	73375573	A5SS	0.5	50	50	ENSMUST00000136114.8	ENSMUSG00000031398.14	Plxna3	chrX	protein_coding	plexin A3
chrX	73372821	73375573	+	73372821;73375198	73374575;73375573	ES	0.5	50	50	ENSMUST00000004326.4	ENSMUSG00000031398.14	Plxna3	chrX	protein_coding	plexin A3
chrX	73381660	73382065	+	73381660;73381974	73381740;73382065	ES	0.5	50	50	ENSMUST00000004326.4	ENSMUSG00000031398.14	Plxna3	chrX	protein_coding	plexin A3
chrX	73377270	73377352	+	73377281	73377352	A5SS	0.5	50	50	ENSMUST00000004326.4	ENSMUSG00000031398.14	Plxna3	chrX	protein_coding	plexin A3
chrX	73396104	73396451	-	73396104	73396480	A5SS	0.5	50	50	ENSMUST00000015433.4	ENSMUSG00000015289.5	Lage3	chrX	protein_coding	L antigen family, member 3
chrX	73411515	73412022	-	73411515;73411864	73411759;73412022	ES	0.5	50	50	ENSMUST00000155676.8	ENSMUSG00000015290.16	Ubl4a	chrX	protein_coding	ubiquitin-like 4A
chrX	73411577	73411759	-	73411515	73411759	A3SS	0.33	50	50	ENSMUST00000155676.8	ENSMUSG00000015290.16	Ubl4a	chrX	protein_coding	ubiquitin-like 4A
chrX	73411616	73411759	-	73411515	73411759	A3SS	0.33	50	50	ENSMUST00000155676.8	ENSMUSG00000015290.16	Ubl4a	chrX	protein_coding	ubiquitin-like 4A
chrX	73411515	73412022	-	73411864	73412022	A3SS&ES	0.5	50	50	ENSMUST00000015434.15	ENSMUSG00000015290.16	Ubl4a	chrX	protein_coding	ubiquitin-like 4A
chrX	73411577	73411759	-	73411616	73411759	A3SS	0.33	50	50	ENSMUST00000015434.15	ENSMUSG00000015290.16	Ubl4a	chrX	protein_coding	ubiquitin-like 4A
chrX	73414617	73416797	-	73414617;73416288	73416220;73416797	ES	0.5	50	50	ENSMUST00000178691.2	ENSMUSG00000015290.16	Ubl4a	chrX	protein_coding	ubiquitin-like 4A
chrX	73416288	73416815	-	73416288	73416797	A5SS	0.5	50	50	ENSMUST00000178691.2	ENSMUSG00000015290.16	Ubl4a	chrX	protein_coding	ubiquitin-like 4A
chrX	73414617	73416797	-	73414617	73416220	A5SS&ES	0.5	50	50	ENSMUST00000114146.8	ENSMUSG00000032806.14	Slc10a3	chrX	protein_coding	solute carrier family 10 (sodium/bile acid cotransporter family), member 3
chrX	73431102	73434080	-	73431102;73431357	73431234;73434080	ES	0.33	50	50	ENSMUST00000114143.10	ENSMUSG00000031399.16	Fam3a	chrX	protein_coding	family with sequence similarity 3, member A
chrX	73434103	73436281	-	73434103;73434710	73434597;73436281	ES	0.5	50	50	ENSMUST00000114143.10	ENSMUSG00000031399.16	Fam3a	chrX	protein_coding	family with sequence similarity 3, member A
chrX	73430711	73431044	-	73430690	73431044	A3SS	0.5	50	50	ENSMUST00000114143.10	ENSMUSG00000031399.16	Fam3a	chrX	protein_coding	family with sequence similarity 3, member A
chrX	73431412	73434080	-	73431357	73434080	A3SS	0.33	50	50	ENSMUST00000114143.10	ENSMUSG00000031399.16	Fam3a	chrX	protein_coding	family with sequence similarity 3, member A
chrX	73436333	73436436	-	73436333	73436495	A5SS	0.5	50	50	ENSMUST00000015427.13	ENSMUSG00000031399.16	Fam3a	chrX	protein_coding	family with sequence similarity 3, member A
chrX	73431102	73434080	-	73431102;73431412	73431234;73434080	ES	0.33	50	50	ENSMUST00000149218.8	ENSMUSG00000031399.16	Fam3a	chrX	protein_coding	family with sequence similarity 3, member A
chrX	73431102	73434080	-	73431102	73431234	5pMXE	0.5	50	50	ENSMUST00000136716.2	ENSMUSG00000031399.16	Fam3a	chrX	protein_coding	family with sequence similarity 3, member A
chrX	73437011	73476411	+	73437011;73471480	73471368;73476411	ES	0.14	50	50	ENSMUST00000144947.8	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73468316	73471368	+	73437011	73471368	A5SS	0.33	50	50	ENSMUST00000144947.8	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73468321	73471368	+	73437011	73471368	A5SS	0.33	50	50	ENSMUST00000144947.8	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73468321	73476411	+	73471480	73476411	A5SS&ES	0.14	50	50	ENSMUST00000144947.8	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73471508	73476411	+	73471480	73476411	A5SS	0.14	50	50	ENSMUST00000144947.8	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73471813	73476411	+	73471480	73476411	A5SS	0.14	50	50	ENSMUST00000144947.8	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73472983	73476411	+	73471480	73476411	A5SS	0.14	50	50	ENSMUST00000144947.8	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73473427	73476411	+	73471480	73476411	A5SS	0.14	50	50	ENSMUST00000144947.8	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73437011;73471508	73471368;73476411	+	73437011	73476411	cassetteExon	0.5	100	100	ENSMUST00000164101.8	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73437011;73471813	73471368;73476411	+	73437011	73476411	cassetteExon	0.5	100	100	ENSMUST00000164101.8	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73477620	73480773	+	73477620	73480770	A3SS	0.5	50	50	ENSMUST00000164101.8	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73468321	73476411	+	73437011	73476411	A5SS	0.14	50	50	ENSMUST00000164101.8	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73472983	73476411	+	73437011	73476411	A5SS	0.14	50	50	ENSMUST00000164101.8	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73473427	73476411	+	73437011	73476411	A5SS	0.14	50	50	ENSMUST00000164101.8	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73468321;73471480	73471368;73476411	+	73468321	73476411	cassetteExon	0.5	100	100	ENSMUST00000135165.8	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73468321;73471508	73471368;73476411	+	73468321	73476411	cassetteExon	0.5	100	100	ENSMUST00000135165.8	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73468321;73471813	73471368;73476411	+	73468321	73476411	cassetteExon	0.5	100	100	ENSMUST00000135165.8	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73472983	73476411	+	73468321	73476411	A5SS	0.14	50	50	ENSMUST00000135165.8	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73473427	73476411	+	73468321	73476411	A5SS	0.14	50	50	ENSMUST00000135165.8	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73468316	73471368	+	73468321	73471368	A5SS	0.33	50	50	ENSMUST00000114128.8	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73471813	73476411	+	73471508	73476411	A5SS	0.16	50	50	ENSMUST00000004330.10	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73472983	73476411	+	73471508	73476411	A5SS	0.16	50	50	ENSMUST00000004330.10	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73473427	73476411	+	73471508	73476411	A5SS	0.16	50	50	ENSMUST00000004330.10	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73468321	73476411	+	73471508	73476411	A5SS&ES	0.16	50	50	ENSMUST00000132749.2	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73437011	73476411	+	73471813	73476411	5pMXE	0.14	50	50	ENSMUST00000138564.8	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73468321	73476411	+	73471813	73476411	5pMXE	0.14	50	50	ENSMUST00000138564.8	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73472983	73476411	+	73471813	73476411	A5SS	0.14	50	50	ENSMUST00000138564.8	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73473427	73476411	+	73471813	73476411	A5SS	0.14	50	50	ENSMUST00000138564.8	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73473427	73476411	+	73472983	73476411	A5SS	0.14	50	50	ENSMUST00000149525.8	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73473427	73477537	+	73473427	73476411	A3SS&ES	0.5	50	50	ENSMUST00000114127.8	ENSMUSG00000004221.17	Ikbkg	chrX	protein_coding	inhibitor of kappaB kinase gamma
chrX	73456086	73457470	-	73456083	73457470	A3SS	0.5	50	50	ENSMUST00000004327.11	ENSMUSG00000031400.11	G6pdx	chrX	protein_coding	glucose-6-phosphate dehydrogenase X-linked
chrX	73636373	73636933	+	73636373	73637015	A3SS	0.5	50	50	ENSMUST00000216108.2	ENSMUSG00000051706.4	Olfr1325	chrX	protein_coding	olfactory receptor 1325
chrX	74032442	74043571	-	74032442;74033776	74033660;74043571	ES	0.5	50	50	ENSMUST00000114109.8	ENSMUSG00000032750.14	Gab3	chrX	protein_coding	growth factor receptor bound protein 2-associated protein 3
chrX	74077080	74128274	-	74048977	74128274	A3SS	0.5	50	50	ENSMUST00000114109.8	ENSMUSG00000032750.14	Gab3	chrX	protein_coding	growth factor receptor bound protein 2-associated protein 3
chrX	74011591	74011768	-	74011591	74032330	A5SS	0.5	50	50	ENSMUST00000114109.8	ENSMUSG00000032750.14	Gab3	chrX	protein_coding	growth factor receptor bound protein 2-associated protein 3
chrX	74048977	74068384	-	74048977	74128274	A5SS	0.33	50	50	ENSMUST00000114109.8	ENSMUSG00000032750.14	Gab3	chrX	protein_coding	growth factor receptor bound protein 2-associated protein 3
chrX	74048977	74069595	-	74048977	74128274	A5SS	0.33	50	50	ENSMUST00000114109.8	ENSMUSG00000032750.14	Gab3	chrX	protein_coding	growth factor receptor bound protein 2-associated protein 3
chrX	74048977	74069595	-	74048977;74068862	74068384;74069595	ES	0.5	50	50	ENSMUST00000037374.11	ENSMUSG00000032750.14	Gab3	chrX	protein_coding	growth factor receptor bound protein 2-associated protein 3
chrX	74077080	74129016	-	74077080	74128274	5pMXE	0.5	50	50	ENSMUST00000037374.11	ENSMUSG00000032750.14	Gab3	chrX	protein_coding	growth factor receptor bound protein 2-associated protein 3
chrX	74142553	74144039	+	74142553;74143700	74143636;74144039	ES	0.33	50	50	ENSMUST00000033776.15	ENSMUSG00000031403.15	Dkc1	chrX	protein_coding	dyskeratosis congenita 1, dyskerin
chrX	74139733;74140320	74140239;74140440	+	74139733	74140440	cassetteExon	0.5	100	100	ENSMUST00000033776.15	ENSMUSG00000031403.15	Dkc1	chrX	protein_coding	dyskeratosis congenita 1, dyskerin
chrX	74140507	74140841	+	74140507	74140889	A3SS	0.5	50	50	ENSMUST00000033776.15	ENSMUSG00000031403.15	Dkc1	chrX	protein_coding	dyskeratosis congenita 1, dyskerin
chrX	74143944	74144039	+	74143700	74144039	A5SS	0.33	50	50	ENSMUST00000033776.15	ENSMUSG00000031403.15	Dkc1	chrX	protein_coding	dyskeratosis congenita 1, dyskerin
chrX	74144606	74146028	+	74144726	74146028	A5SS	0.5	50	50	ENSMUST00000033776.15	ENSMUSG00000031403.15	Dkc1	chrX	protein_coding	dyskeratosis congenita 1, dyskerin
chrX	74139733	74140440	+	74140320	74140440	A5SS	0.5	50	50	ENSMUST00000135389.8	ENSMUSG00000031403.15	Dkc1	chrX	protein_coding	dyskeratosis congenita 1, dyskerin
chrX	74142553;74143944	74143636;74144039	+	74142553	74144039	cassetteExon	0.5	100	100	ENSMUST00000140609.8	ENSMUSG00000031403.15	Dkc1	chrX	protein_coding	dyskeratosis congenita 1, dyskerin
chrX	74142553	74144039	+	74143700	74144039	5pMXE	0.33	50	50	ENSMUST00000151327.8	ENSMUSG00000031403.15	Dkc1	chrX	protein_coding	dyskeratosis congenita 1, dyskerin
chrX	74144165	74144596	+	74144165	74147946	A3SS	0.5	50	50	ENSMUST00000153844.8	ENSMUSG00000031403.15	Dkc1	chrX	protein_coding	dyskeratosis congenita 1, dyskerin
chrX	74146171	74147946	+	74144165	74147946	A5SS	0.5	50	50	ENSMUST00000153844.8	ENSMUSG00000031403.15	Dkc1	chrX	protein_coding	dyskeratosis congenita 1, dyskerin
chrX	74142553	74144039	+	74143944	74144039	5pMXE	0.33	50	50	ENSMUST00000154936.8	ENSMUSG00000031403.15	Dkc1	chrX	protein_coding	dyskeratosis congenita 1, dyskerin
chrX	74169486;74172986	74172899;74174331	-	74169486	74174331	cassetteExon	0.5	100	100	ENSMUST00000033775.9	ENSMUSG00000031402.13	Mpp1	chrX	protein_coding	membrane protein, palmitoylated
chrX	74161498	74165041	-	74161558	74165041	A3SS	0.5	50	50	ENSMUST00000033775.9	ENSMUSG00000031402.13	Mpp1	chrX	protein_coding	membrane protein, palmitoylated
chrX	74169055	74169394	-	74169055	74169343	A5SS	0.5	50	50	ENSMUST00000033775.9	ENSMUSG00000031402.13	Mpp1	chrX	protein_coding	membrane protein, palmitoylated
chrX	74161558	74174331	-	74169486	74174331	A3SS&ES	0.2	50	50	ENSMUST00000114092.8	ENSMUSG00000031402.13	Mpp1	chrX	protein_coding	membrane protein, palmitoylated
chrX	74161558;74165109	74165041;74174331	-	74161558	74174331	cassetteExon	0.5	100	100	ENSMUST00000132501.8	ENSMUSG00000031402.13	Mpp1	chrX	protein_coding	membrane protein, palmitoylated
chrX	74172986	74174331	-	74161558	74174331	A3SS	0.2	50	50	ENSMUST00000132501.8	ENSMUSG00000031402.13	Mpp1	chrX	protein_coding	membrane protein, palmitoylated
chrX	74161558	74174331	-	74157272	74174331	A3SS	0.2	50	50	ENSMUST00000132935.2	ENSMUSG00000031402.13	Mpp1	chrX	protein_coding	membrane protein, palmitoylated
chrX	74165109	74174331	-	74157272	74174331	A3SS	0.2	50	50	ENSMUST00000132935.2	ENSMUSG00000031402.13	Mpp1	chrX	protein_coding	membrane protein, palmitoylated
chrX	74169486	74174331	-	74157272	74174331	A3SS	0.2	50	50	ENSMUST00000132935.2	ENSMUSG00000031402.13	Mpp1	chrX	protein_coding	membrane protein, palmitoylated
chrX	74172986	74174331	-	74157272	74174331	A3SS	0.2	50	50	ENSMUST00000132935.2	ENSMUSG00000031402.13	Mpp1	chrX	protein_coding	membrane protein, palmitoylated
chrX	74157272	74157840	-	74157272	74174331	A5SS	0.5	50	50	ENSMUST00000132935.2	ENSMUSG00000031402.13	Mpp1	chrX	protein_coding	membrane protein, palmitoylated
chrX	74169486	74174331	-	74165109	74174331	A3SS	0.25	50	50	ENSMUST00000153318.8	ENSMUSG00000031402.13	Mpp1	chrX	protein_coding	membrane protein, palmitoylated
chrX	74172986	74174331	-	74165109	74174331	A3SS	0.25	50	50	ENSMUST00000153318.8	ENSMUSG00000031402.13	Mpp1	chrX	protein_coding	membrane protein, palmitoylated
chrX	74165109	74167502	-	74165109	74174331	A5SS	0.5	50	50	ENSMUST00000153318.8	ENSMUSG00000031402.13	Mpp1	chrX	protein_coding	membrane protein, palmitoylated
chrX	74331985	74360115	-	74331985;74339905	74339696;74360115	ES	0.5	50	50	ENSMUST00000033539.13	ENSMUSG00000031196.14	F8	chrX	protein_coding	coagulation factor VIII
chrX	74423182	74425764	-	74423182	74426101	A5SS	0.5	50	50	ENSMUST00000147349.8	ENSMUSG00000031196.14	F8	chrX	protein_coding	coagulation factor VIII
chrX	74430858	74435246	+	74430858;74434465	74434390;74435246	ES	0.5	50	50	ENSMUST00000033541.5	ENSMUSG00000031198.5	Fundc2	chrX	protein_coding	FUN14 domain containing 2
chrX	74455128	74459621	-	74453219	74459621	A3SS	0.33	50	50	ENSMUST00000033543.14	ENSMUSG00000090110.9	Cmc4	chrX	protein_coding	C-x(9)-C motif containing 4
chrX	74455392	74459621	-	74453219	74459621	A3SS	0.33	50	50	ENSMUST00000033543.14	ENSMUSG00000090110.9	Cmc4	chrX	protein_coding	C-x(9)-C motif containing 4
chrX	74455128	74459621	-	74455128;74455392	74455241;74459621	ES	0.5	50	50	ENSMUST00000033542.11	ENSMUSG00000031200.17	Mtcp1	chrX	protein_coding	mature T cell proliferation 1
chrX	74481597	74491409	+	74481597;74490893	74490762;74491409	ES	0.5	50	50	ENSMUST00000033544.14	ENSMUSG00000031201.18	Brcc3	chrX	protein_coding	BRCA1/BRCA2-containing complex, subunit 3
chrX	74460447	74466385	+	74462071	74466385	A5SS	0.5	50	50	ENSMUST00000151938.8	ENSMUSG00000031201.18	Brcc3	chrX	protein_coding	BRCA1/BRCA2-containing complex, subunit 3
chrX	74460447	74461183	+	74460447	74466385	A3SS	0.5	50	50	ENSMUST00000133781.8	ENSMUSG00000031201.18	Brcc3	chrX	protein_coding	BRCA1/BRCA2-containing complex, subunit 3
chrX	74566964	74574691	+	74566964	74567442	3pMXE	0.5	50	50	ENSMUST00000114070.10	ENSMUSG00000031197.12	Vbp1	chrX	protein_coding	von Hippel-Lindau binding protein 1
chrX	74785584	74795131	-	74785584;74790445	74790283;74795131	ES	0.33	50	50	ENSMUST00000138943.8	ENSMUSG00000087396.8	4933407K13Rik	chrX	lncRNA	RIKEN cDNA 4933407K13 gene
chrX	74785584	74795131	-	74774788	74795131	A3SS	0.33	50	50	ENSMUST00000129980.8	ENSMUSG00000087396.8	4933407K13Rik	chrX	lncRNA	RIKEN cDNA 4933407K13 gene
chrX	74790445	74795131	-	74774788	74795131	A3SS	0.33	50	50	ENSMUST00000129980.8	ENSMUSG00000087396.8	4933407K13Rik	chrX	lncRNA	RIKEN cDNA 4933407K13 gene
chrX	74774788	74779699	-	74774788	74795131	A5SS	0.5	50	50	ENSMUST00000129980.8	ENSMUSG00000087396.8	4933407K13Rik	chrX	lncRNA	RIKEN cDNA 4933407K13 gene
chrX	74843096;74843349	74843323;74844108	-	74843096	74844108	cassetteExon	0.5	100	100	ENSMUST00000114059.10	ENSMUSG00000016382.16	Pls3	chrX	protein_coding	plastin 3 (T-isoform)
chrX	74870559;74917985	74917944;74918654	-	74870559	74918654	cassetteExon	0.5	100	100	ENSMUST00000114059.10	ENSMUSG00000016382.16	Pls3	chrX	protein_coding	plastin 3 (T-isoform)
chrX	74870559	74886510	-	74870559	74918654	A5SS	0.25	50	50	ENSMUST00000114059.10	ENSMUSG00000016382.16	Pls3	chrX	protein_coding	plastin 3 (T-isoform)
chrX	74870559	74886689	-	74870559	74918654	A5SS	0.25	50	50	ENSMUST00000114059.10	ENSMUSG00000016382.16	Pls3	chrX	protein_coding	plastin 3 (T-isoform)
chrX	74870559	74918654	-	74870559	74917944	5pMXE	0.25	50	50	ENSMUST00000033547.14	ENSMUSG00000016382.16	Pls3	chrX	protein_coding	plastin 3 (T-isoform)
chrX	74917580	74917944	-	74870559	74917944	A3SS	0.5	50	50	ENSMUST00000033547.14	ENSMUSG00000016382.16	Pls3	chrX	protein_coding	plastin 3 (T-isoform)
chrX	74870559	74886510	-	74870559	74917944	A5SS	0.25	50	50	ENSMUST00000033547.14	ENSMUSG00000016382.16	Pls3	chrX	protein_coding	plastin 3 (T-isoform)
chrX	74870559	74886689	-	74870559	74917944	A5SS	0.25	50	50	ENSMUST00000033547.14	ENSMUSG00000016382.16	Pls3	chrX	protein_coding	plastin 3 (T-isoform)
chrX	74870559	74886689	-	74870559	74886510	5pMXE	0.25	50	50	ENSMUST00000114057.8	ENSMUSG00000016382.16	Pls3	chrX	protein_coding	plastin 3 (T-isoform)
chrX	76554875;76628465	76628400;76677152	+	76554875	76677152	cassetteExon	0.5	100	100	ENSMUST00000088217.12	ENSMUSG00000025246.14	Tbl1x	chrX	protein_coding	transducin (beta)-like 1 X-linked
chrX	76886222	76888625	-	76886222;76886613	76886503;76888625	ES	0.5	50	50	ENSMUST00000000003.14	ENSMUSG00000000003.16	Pbsn	chrX	protein_coding	probasin
chrX	77526067	77527357	-	77496778	77527357	A3SS	0.5	50	50	ENSMUST00000177904.8	ENSMUSG00000047996.17	Prrg1	chrX	protein_coding	proline rich Gla (G-carboxyglutamic acid) 1
chrX	77527517	77536855	-	77527517	77564377	A5SS	0.5	50	50	ENSMUST00000177904.8	ENSMUSG00000047996.17	Prrg1	chrX	protein_coding	proline rich Gla (G-carboxyglutamic acid) 1
chrX	77564427	77578556	-	77564427	77627310	A5SS	0.2	50	50	ENSMUST00000177904.8	ENSMUSG00000047996.17	Prrg1	chrX	protein_coding	proline rich Gla (G-carboxyglutamic acid) 1
chrX	77564427	77605166	-	77564427	77627310	A5SS	0.2	50	50	ENSMUST00000177904.8	ENSMUSG00000047996.17	Prrg1	chrX	protein_coding	proline rich Gla (G-carboxyglutamic acid) 1
chrX	77564427	77605182	-	77564427	77627310	A5SS	0.2	50	50	ENSMUST00000177904.8	ENSMUSG00000047996.17	Prrg1	chrX	protein_coding	proline rich Gla (G-carboxyglutamic acid) 1
chrX	77564427	77627375	-	77564427	77627310	A5SS	0.2	50	50	ENSMUST00000177904.8	ENSMUSG00000047996.17	Prrg1	chrX	protein_coding	proline rich Gla (G-carboxyglutamic acid) 1
chrX	77564427	77627375	-	77564427;77605250	77605182;77627375	ES	0.33	50	50	ENSMUST00000114025.8	ENSMUSG00000047996.17	Prrg1	chrX	protein_coding	proline rich Gla (G-carboxyglutamic acid) 1
chrX	77527517;77536926	77536855;77627375	-	77527517;77605250	77564377;77627375	MXE	0.5	100	100	ENSMUST00000114025.8	ENSMUSG00000047996.17	Prrg1	chrX	protein_coding	proline rich Gla (G-carboxyglutamic acid) 1
chrX	77564427	77578556	-	77564427	77605182	A5SS	0.2	50	50	ENSMUST00000114025.8	ENSMUSG00000047996.17	Prrg1	chrX	protein_coding	proline rich Gla (G-carboxyglutamic acid) 1
chrX	77564427	77605166	-	77564427	77605182	A5SS	0.2	50	50	ENSMUST00000114025.8	ENSMUSG00000047996.17	Prrg1	chrX	protein_coding	proline rich Gla (G-carboxyglutamic acid) 1
chrX	77527517;77536926	77536855;77627375	-	77527517;77564427	77564377;77627375	MXE	0.5	100	100	ENSMUST00000114024.9	ENSMUSG00000047996.17	Prrg1	chrX	protein_coding	proline rich Gla (G-carboxyglutamic acid) 1
chrX	77564427;77605250	77605166;77627375	-	77564427	77627375	cassetteExon	0.5	100	100	ENSMUST00000114024.9	ENSMUSG00000047996.17	Prrg1	chrX	protein_coding	proline rich Gla (G-carboxyglutamic acid) 1
chrX	77564427	77578556	-	77564427	77627375	A5SS	0.2	50	50	ENSMUST00000114024.9	ENSMUSG00000047996.17	Prrg1	chrX	protein_coding	proline rich Gla (G-carboxyglutamic acid) 1
chrX	77605250	77627375	-	77536926	77627375	A3SS	0.33	50	50	ENSMUST00000126209.8	ENSMUSG00000047996.17	Prrg1	chrX	protein_coding	proline rich Gla (G-carboxyglutamic acid) 1
chrX	77579105	77605166	-	77564427	77605166	A3SS	0.5	50	50	ENSMUST00000134602.8	ENSMUSG00000047996.17	Prrg1	chrX	protein_coding	proline rich Gla (G-carboxyglutamic acid) 1
chrX	77564427	77578556	-	77564427	77605166	A5SS	0.2	50	50	ENSMUST00000134602.8	ENSMUSG00000047996.17	Prrg1	chrX	protein_coding	proline rich Gla (G-carboxyglutamic acid) 1
chrX	78398843	78401556	-	78398843	78403910	A5SS	0.5	50	50	ENSMUST00000197180.6	ENSMUSG00000073077.8	Cfap47	chrX	protein_coding	cilia and flagella associated protein 47
chrX	78671526	78685327	-	78671526	78679097	5pMXE	0.5	50	50	ENSMUST00000114016.10	ENSMUSG00000046942.18	Mageb16	chrX	protein_coding	MAGE family member B16
chrX	80114766	80127897	+	80114423	80127897	A5SS	0.5	50	50	ENSMUST00000150052.2	ENSMUSG00000025666.17	Tmem47	chrX	protein_coding	transmembrane protein 47
chrX	82087084	82180234	+	81992753	82180234	A5SS	0.5	50	50	ENSMUST00000127295.8	ENSMUSG00000045103.20	Dmd	chrX	protein_coding	dystrophin, muscular dystrophy
chrX	84187771	84192736	+	84187771;84188555	84188517;84192736	ES	0.5	50	50	ENSMUST00000114000.8	ENSMUSG00000045103.20	Dmd	chrX	protein_coding	dystrophin, muscular dystrophy
chrX	84234308	84246077	+	84234308;84241141	84241110;84246077	ES	0.5	50	50	ENSMUST00000114000.8	ENSMUSG00000045103.20	Dmd	chrX	protein_coding	dystrophin, muscular dystrophy
chrX	82971603	82971902	+	82971603	82972409	A3SS	0.5	50	50	ENSMUST00000114000.8	ENSMUSG00000045103.20	Dmd	chrX	protein_coding	dystrophin, muscular dystrophy
chrX	82899202	82899312	+	82874175	82899312	A5SS	0.5	50	50	ENSMUST00000114000.8	ENSMUSG00000045103.20	Dmd	chrX	protein_coding	dystrophin, muscular dystrophy
chrX	83120351	83315558	+	83066018	83315558	A5SS	0.5	50	50	ENSMUST00000114000.8	ENSMUSG00000045103.20	Dmd	chrX	protein_coding	dystrophin, muscular dystrophy
chrX	83816512	83817188	+	83690832	83817188	A5SS	0.5	50	50	ENSMUST00000114000.8	ENSMUSG00000045103.20	Dmd	chrX	protein_coding	dystrophin, muscular dystrophy
chrX	84092065	84097577	+	84018371	84097577	A5SS	0.5	50	50	ENSMUST00000114000.8	ENSMUSG00000045103.20	Dmd	chrX	protein_coding	dystrophin, muscular dystrophy
chrX	84187771	84188517	+	84187771	84221310	A3SS	0.33	50	50	ENSMUST00000239019.2	ENSMUSG00000045103.20	Dmd	chrX	protein_coding	dystrophin, muscular dystrophy
chrX	84187771	84192736	+	84187771	84221310	A3SS	0.33	50	50	ENSMUST00000239019.2	ENSMUSG00000045103.20	Dmd	chrX	protein_coding	dystrophin, muscular dystrophy
chrX	84196791	84221310	+	84187771	84221310	A5SS	0.5	50	50	ENSMUST00000239019.2	ENSMUSG00000045103.20	Dmd	chrX	protein_coding	dystrophin, muscular dystrophy
chrX	84619216	84637258	+	84619216	84652996	A3SS	0.5	50	50	ENSMUST00000048250.10	ENSMUSG00000035476.10	Tab3	chrX	protein_coding	TGF-beta activated kinase 1/MAP3K7 binding protein 3
chrX	84617928	84619156	+	84617771	84619156	A5SS	0.5	50	50	ENSMUST00000048250.10	ENSMUSG00000035476.10	Tab3	chrX	protein_coding	TGF-beta activated kinase 1/MAP3K7 binding protein 3
chrX	84617928	84652996	+	84619216	84652996	A5SS&ES	0.5	50	50	ENSMUST00000048250.10	ENSMUSG00000035476.10	Tab3	chrX	protein_coding	TGF-beta activated kinase 1/MAP3K7 binding protein 3
chrX	84617928;84619216	84619156;84652996	+	84617928	84652996	cassetteExon	0.5	100	100	ENSMUST00000137438.2	ENSMUSG00000035476.10	Tab3	chrX	protein_coding	TGF-beta activated kinase 1/MAP3K7 binding protein 3
chrX	84617928	84652996	+	84617928	84619156	3pMXE	0.5	50	50	ENSMUST00000152880.2	ENSMUSG00000035476.10	Tab3	chrX	protein_coding	TGF-beta activated kinase 1/MAP3K7 binding protein 3
chrX	84789907	84797938	-	84789907;84793301	84793218;84797938	ES	0.5	50	50	ENSMUST00000142152.2	ENSMUSG00000025059.17	Gk	chrX	protein_coding	glycerol kinase
chrX	84748002;84749930	84749844;84754657	-	84748002	84754657	cassetteExon	0.5	100	100	ENSMUST00000142152.2	ENSMUSG00000025059.17	Gk	chrX	protein_coding	glycerol kinase
chrX	84780955;84782845	84782828;84783901	-	84780955	84783901	cassetteExon	0.5	100	100	ENSMUST00000142152.2	ENSMUSG00000025059.17	Gk	chrX	protein_coding	glycerol kinase
chrX	84750791	84754657	-	84748002	84754657	A3SS	0.33	50	50	ENSMUST00000142152.2	ENSMUSG00000025059.17	Gk	chrX	protein_coding	glycerol kinase
chrX	84750791	84754657	-	84749930	84754657	A3SS	0.33	50	50	ENSMUST00000156390.8	ENSMUSG00000025059.17	Gk	chrX	protein_coding	glycerol kinase
chrX	85299027	85348608	-	85299027	85299734	5pMXE	0.5	50	50	ENSMUST00000113969.10	ENSMUSG00000035427.19	Mageb4	chrX	protein_coding	MAGE family member B4
chrX	85812932	85828899	-	85805779	85828899	A3SS	0.5	50	50	ENSMUST00000113966.8	ENSMUSG00000052372.11	Il1rapl1	chrX	protein_coding	interleukin 1 receptor accessory protein-like 1
chrX	88450287	88450375	-	88450287	88450374	A5SS	0.5	50	50	ENSMUST00000113959.8	ENSMUSG00000035395.12	Dcaf8l	chrX	protein_coding	DDB1 and CUL4 associated factor 8 like
chrX	92524216;92529920	92529769;92531701	-	92524216	92531701	cassetteExon	0.5	100	100	ENSMUST00000006856.3	ENSMUSG00000006678.7	Pola1	chrX	protein_coding	polymerase (DNA directed), alpha 1
chrX	92667521;92668103	92667992;92670094	-	92667521	92670094	cassetteExon	0.5	100	100	ENSMUST00000006856.3	ENSMUSG00000006678.7	Pola1	chrX	protein_coding	polymerase (DNA directed), alpha 1
chrX	92719082	92745691	+	92698822	92745691	A5SS	0.5	50	50	ENSMUST00000113933.9	ENSMUSG00000035246.17	Pcyt1b	chrX	protein_coding	phosphate cytidylyltransferase 1, choline, beta isoform
chrX	93013536	93014932	+	93013536	93015409	A3SS	0.5	50	50	ENSMUST00000121565.8	ENSMUSG00000081044.9	AU015836	chrX	protein_coding	expressed sequence AU015836
chrX	93145986	93166674	-	93145986;93157869	93157802;93166674	ES	0.5	50	50	ENSMUST00000088102.12	ENSMUSG00000079509.11	Zfx	chrX	protein_coding	zinc finger protein X-linked
chrX	93157869	93167211	-	93157869	93166674	5pMXE	0.5	50	50	ENSMUST00000088102.12	ENSMUSG00000079509.11	Zfx	chrX	protein_coding	zinc finger protein X-linked
chrX	93145986;93147484	93147402;93157802	-	93145986	93157802	cassetteExon	0.5	100	100	ENSMUST00000088102.12	ENSMUSG00000079509.11	Zfx	chrX	protein_coding	zinc finger protein X-linked
chrX	93145986	93166338	-	93145986	93157802	A5SS&ES	0.25	50	50	ENSMUST00000088102.12	ENSMUSG00000079509.11	Zfx	chrX	protein_coding	zinc finger protein X-linked
chrX	93145986	93166674	-	93145986	93166338	5pMXE	0.25	50	50	ENSMUST00000113926.8	ENSMUSG00000079509.11	Zfx	chrX	protein_coding	zinc finger protein X-linked
chrX	93145986	93147402	-	93145986	93166338	A5SS	0.25	50	50	ENSMUST00000113926.8	ENSMUSG00000079509.11	Zfx	chrX	protein_coding	zinc finger protein X-linked
chrX	93145986	93147402	-	93145986	93166674	A5SS	0.25	50	50	ENSMUST00000113927.8	ENSMUSG00000079509.11	Zfx	chrX	protein_coding	zinc finger protein X-linked
chrX	93145986	93166674	-	93145986	93157802	A5SS&ES	0.25	50	50	ENSMUST00000135661.2	ENSMUSG00000079509.11	Zfx	chrX	protein_coding	zinc finger protein X-linked
chrX	93145986	93166674	-	93157869	93166674	3pMXE	0.5	50	50	ENSMUST00000130312.2	ENSMUSG00000079509.11	Zfx	chrX	protein_coding	zinc finger protein X-linked
chrX	93255388	93256377	-	93255388	93256171	5pMXE	0.5	50	50	ENSMUST00000050328.15	ENSMUSG00000035150.16	Eif2s3x	chrX	protein_coding	eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked
chrX	93279026	93285551	+	93279026	93281655	3pMXE	0.33	50	50	ENSMUST00000150999.8	ENSMUSG00000043929.17	Klhl15	chrX	protein_coding	kelch-like 15
chrX	93279026	93296021	+	93279026	93281655	3pMXE	0.33	50	50	ENSMUST00000150999.8	ENSMUSG00000043929.17	Klhl15	chrX	protein_coding	kelch-like 15
chrX	93278731	93278827	+	93278259	93278827	A5SS	0.5	50	50	ENSMUST00000150999.8	ENSMUSG00000043929.17	Klhl15	chrX	protein_coding	kelch-like 15
chrX	93279026	93296021	+	93279026;93285601	93285551;93296021	ES	0.5	50	50	ENSMUST00000153900.8	ENSMUSG00000043929.17	Klhl15	chrX	protein_coding	kelch-like 15
chrX	93279525	93285551	+	93279026	93285551	A5SS	0.5	50	50	ENSMUST00000153900.8	ENSMUSG00000043929.17	Klhl15	chrX	protein_coding	kelch-like 15
chrX	93296732	93315962	+	93296732	93297546	3pMXE	0.5	50	50	ENSMUST00000113908.8	ENSMUSG00000043929.17	Klhl15	chrX	protein_coding	kelch-like 15
chrX	93402696	93405255	-	93402696;93403146	93403052;93405255	ES	0.5	50	50	ENSMUST00000239046.2	ENSMUSG00000118554.2	RP23-63A9.5	chrX	protein_coding	--
chrX	93405351	93409265	-	93405351	93408061	5pMXE	0.5	50	50	ENSMUST00000239046.2	ENSMUSG00000118554.2	RP23-63A9.5	chrX	protein_coding	--
chrX	93400953	93402585	-	93391813	93402585	A3SS	0.5	50	50	ENSMUST00000239046.2	ENSMUSG00000118554.2	RP23-63A9.5	chrX	protein_coding	--
chrX	93400953	93402585	-	93400953	93402590	A5SS	0.5	50	50	ENSMUST00000044989.12	ENSMUSG00000043549.14	Fam90a1b	chrX	protein_coding	family with sequence similarity 90, member A1B
chrX	93410932	93423532	+	93410768	93423532	A5SS	0.25	50	50	ENSMUST00000113898.8	ENSMUSG00000079508.9	Apoo	chrX	protein_coding	apolipoprotein O
chrX	93411091	93423532	+	93410768	93423532	A5SS	0.25	50	50	ENSMUST00000113898.8	ENSMUSG00000079508.9	Apoo	chrX	protein_coding	apolipoprotein O
chrX	93411107	93423532	+	93410768	93423532	A5SS	0.25	50	50	ENSMUST00000113898.8	ENSMUSG00000079508.9	Apoo	chrX	protein_coding	apolipoprotein O
chrX	93410932	93423532	+	93411107	93423532	A5SS	0.25	50	50	ENSMUST00000113897.9	ENSMUSG00000079508.9	Apoo	chrX	protein_coding	apolipoprotein O
chrX	93411091	93423532	+	93411107	93423532	A5SS	0.25	50	50	ENSMUST00000113897.9	ENSMUSG00000079508.9	Apoo	chrX	protein_coding	apolipoprotein O
chrX	93411091	93423532	+	93410932	93423532	A5SS	0.25	50	50	ENSMUST00000113896.8	ENSMUSG00000079508.9	Apoo	chrX	protein_coding	apolipoprotein O
chrX	93579282	93579466	-	93579283	93579466	A3SS	0.5	50	50	ENSMUST00000026142.8	ENSMUSG00000025151.17	Maged1	chrX	protein_coding	MAGE family member D1
chrX	94102666	94121045	-	94102666;94114910	94114779;94121045	ES	0.5	50	50	ENSMUST00000113876.9	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94156152	94209206	-	94156152;94174621	94174442;94209206	ES	0.5	50	50	ENSMUST00000113876.9	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94174621	94210030	-	94174621	94209206	5pMXE	0.14	50	50	ENSMUST00000113876.9	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94174621	94240006	-	94174621	94209206	5pMXE	0.14	50	50	ENSMUST00000113876.9	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94174621	94240016	-	94174621	94209206	5pMXE	0.14	50	50	ENSMUST00000113876.9	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94095760;94096396	94096239;94098549	-	94095760	94098549	cassetteExon	0.5	100	100	ENSMUST00000113876.9	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94095760;94096396	94096286;94098549	-	94095760	94098549	cassetteExon	0.5	100	100	ENSMUST00000113876.9	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94095760;94097896	94097835;94098549	-	94095760	94098549	cassetteExon	0.5	100	100	ENSMUST00000113876.9	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94092952	94102423	-	94098617	94102423	A3SS&ES	0.5	50	50	ENSMUST00000113876.9	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94095760	94098487	-	94095760	94098549	A5SS	0.2	50	50	ENSMUST00000113876.9	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94156152	94209199	-	94156152	94174442	A5SS&ES	0.33	50	50	ENSMUST00000113876.9	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94174621	94209195	-	94174621	94209206	A5SS	0.14	50	50	ENSMUST00000113876.9	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94174621	94209199	-	94174621	94209206	A5SS	0.14	50	50	ENSMUST00000113876.9	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94174621	94209825	-	94174621	94209206	A5SS	0.14	50	50	ENSMUST00000113876.9	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94156152	94240016	-	94156152;94174621	94174442;94240016	ES	0.5	50	50	ENSMUST00000197364.5	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94156152	94209206	-	94156152	94174442	A5SS&ES	0.2	50	50	ENSMUST00000197364.5	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94156152	94210030	-	94156152	94174442	A5SS&ES	0.2	50	50	ENSMUST00000197364.5	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94174621	94209195	-	94174621	94240016	A5SS	0.14	50	50	ENSMUST00000197364.5	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94174621	94209199	-	94174621	94240016	A5SS	0.14	50	50	ENSMUST00000197364.5	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94174621	94209825	-	94174621	94240016	A5SS	0.14	50	50	ENSMUST00000197364.5	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94174621	94210030	-	94174621	94240016	A5SS	0.14	50	50	ENSMUST00000197364.5	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94174621	94240006	-	94174621	94240016	A5SS	0.14	50	50	ENSMUST00000197364.5	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94174621	94210030	-	94174621	94209195	5pMXE	0.14	50	50	ENSMUST00000113883.8	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94174621	94240006	-	94174621	94209195	5pMXE	0.14	50	50	ENSMUST00000113883.8	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94174621	94209199	-	94174621	94209195	A5SS	0.14	50	50	ENSMUST00000113883.8	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94174621	94209825	-	94174621	94209195	A5SS	0.14	50	50	ENSMUST00000113883.8	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94156152	94210030	-	94156152;94174621	94174442;94210030	ES	0.33	50	50	ENSMUST00000182001.8	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94174621	94240006	-	94174621	94210030	5pMXE	0.14	50	50	ENSMUST00000182001.8	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94156152;94209576	94209199;94210030	-	94156152;94174621	94174442;94210030	MXE	0.5	100	100	ENSMUST00000182001.8	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94156152;94209576	94209206;94210030	-	94156152;94174621	94174442;94210030	MXE	0.5	100	100	ENSMUST00000182001.8	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94174621;94209576	94209195;94210030	-	94174621	94210030	cassetteExon	0.5	100	100	ENSMUST00000182001.8	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94174621;94209576	94209199;94210030	-	94174621	94210030	cassetteExon	0.5	100	100	ENSMUST00000182001.8	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94174621;94209576	94209206;94210030	-	94174621	94210030	cassetteExon	0.5	100	100	ENSMUST00000182001.8	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94174621	94209825	-	94174621	94210030	A5SS	0.14	50	50	ENSMUST00000182001.8	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94156152	94209199	-	94156152;94174621	94174442;94209199	ES	0.5	50	50	ENSMUST00000113878.8	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94174621	94209825	-	94174621	94209199	A5SS&ES	0.2	50	50	ENSMUST00000113878.8	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94209576	94209825	-	94209576	94210030	A5SS	0.5	50	50	ENSMUST00000113878.8	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94095760;94097896	94097835;94098549	-	94095760;94096396	94096286;94098549	MXE	0.5	100	100	ENSMUST00000113884.8	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94095760	94096239	-	94095760	94096286	A5SS	0.2	50	50	ENSMUST00000113884.8	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94095760	94098487	-	94095760	94096286	A5SS&ES	0.2	50	50	ENSMUST00000113884.8	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94095760;94096396	94096239;94098549	-	94095760;94097896	94097835;94098549	MXE	0.5	100	100	ENSMUST00000128565.8	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94095760	94098487	-	94095760	94097835	A5SS&ES	0.2	50	50	ENSMUST00000128565.8	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94156152	94209199	-	94156152	94240016	A5SS	0.2	50	50	ENSMUST00000128565.8	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94156152	94209206	-	94156152	94240016	A5SS	0.2	50	50	ENSMUST00000128565.8	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94156152	94210030	-	94156152	94240016	A5SS	0.2	50	50	ENSMUST00000128565.8	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94174621	94240006	-	94174621	94209825	5pMXE	0.14	50	50	ENSMUST00000199920.5	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94156152;94209576	94209199;94209825	-	94156152;94174621	94174442;94209825	MXE	0.5	100	100	ENSMUST00000199920.5	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94156152;94209576	94209206;94209825	-	94156152;94174621	94174442;94209825	MXE	0.5	100	100	ENSMUST00000199920.5	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94174621;94209576	94209195;94209825	-	94174621	94209825	cassetteExon	0.5	100	100	ENSMUST00000199920.5	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94174621;94209576	94209199;94209825	-	94174621	94209825	cassetteExon	0.5	100	100	ENSMUST00000199920.5	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94174621;94209576	94209206;94209825	-	94174621	94209825	cassetteExon	0.5	100	100	ENSMUST00000199920.5	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94095760	94098487	-	94095760	94096239	A5SS&ES	0.2	50	50	ENSMUST00000182135.3	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94156152	94210030	-	94156152	94209206	5pMXE	0.2	50	50	ENSMUST00000113873.9	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94156152	94209199	-	94156152	94209206	A5SS	0.2	50	50	ENSMUST00000113873.9	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94156152	94210030	-	94156152	94209199	5pMXE	0.2	50	50	ENSMUST00000198753.5	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94156152	94240016	-	94156152	94174442	A5SS&ES	0.2	50	50	ENSMUST00000200628.2	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94174621	94209199	-	94174621	94240006	A5SS	0.14	50	50	ENSMUST00000200628.2	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94156152;94209576	94209199;94210030	-	94156152	94210030	cassetteExon	0.5	100	100	ENSMUST00000182562.2	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94156152;94209576	94209206;94210030	-	94156152	94210030	cassetteExon	0.5	100	100	ENSMUST00000182562.2	ENSMUSG00000025656.18	Arhgef9	chrX	protein_coding	CDC42 guanine nucleotide exchange factor (GEF) 9
chrX	94515317	94538566	-	94515317	94521593	5pMXE	0.5	50	50	ENSMUST00000033549.3	ENSMUSG00000031204.4	Asb12	chrX	protein_coding	ankyrin repeat and SOCS box-containing 12
chrX	94685932	94686914	-	94685964	94686914	A3SS	0.5	50	50	ENSMUST00000120620.8	ENSMUSG00000035062.14	Zc4h2	chrX	protein_coding	zinc finger, C4H2 domain containing
chrX	94687065	94688913	-	94687086	94688913	A3SS	0.5	50	50	ENSMUST00000120620.8	ENSMUSG00000035062.14	Zc4h2	chrX	protein_coding	zinc finger, C4H2 domain containing
chrX	94966098	94968870	+	94966098	94968051	3pMXE	0.5	50	50	ENSMUST00000150123.8	ENSMUSG00000035045.18	Zc3h12b	chrX	protein_coding	zinc finger CCCH-type containing 12B
chrX	94966098	94968870	+	94966098;94968285	94968051;94968870	ES	0.5	50	50	ENSMUST00000082183.8	ENSMUSG00000035045.18	Zc3h12b	chrX	protein_coding	zinc finger CCCH-type containing 12B
chrX	94990679;94991054	94991004;94991376	-	94990679	94991376	cassetteExon	0.5	100	100	ENSMUST00000079987.13	ENSMUSG00000057421.13	Las1l	chrX	protein_coding	LAS1-like (S. cerevisiae)
chrX	95312790	95313162	-	95312738	95313162	A3SS	0.5	50	50	ENSMUST00000050707.3	ENSMUSG00000044206.4	Vsig4	chrX	protein_coding	V-set and immunoglobulin domain containing 4
chrX	95313218	95334359	-	95313218	95334096	A5SS	0.5	50	50	ENSMUST00000050707.3	ENSMUSG00000044206.4	Vsig4	chrX	protein_coding	V-set and immunoglobulin domain containing 4
chrX	95351418;95355383	95355323;95356634	-	95351418	95356634	cassetteExon	0.5	100	100	ENSMUST00000119035.9	ENSMUSG00000045802.14	Hsf3	chrX	protein_coding	heat shock transcription factor 3
chrX	95365976;95366425	95366375;95373120	-	95365976	95373120	cassetteExon	0.5	100	100	ENSMUST00000119035.9	ENSMUSG00000045802.14	Hsf3	chrX	protein_coding	heat shock transcription factor 3
chrX	95400849	95411427	-	95400849	95499874	A5SS	0.33	50	50	ENSMUST00000119035.9	ENSMUSG00000045802.14	Hsf3	chrX	protein_coding	heat shock transcription factor 3
chrX	95400849	95499291	-	95400849	95499874	A5SS	0.33	50	50	ENSMUST00000119035.9	ENSMUSG00000045802.14	Hsf3	chrX	protein_coding	heat shock transcription factor 3
chrX	95400849	95411427	-	95400849	95499291	A5SS	0.33	50	50	ENSMUST00000164693.8	ENSMUSG00000045802.14	Hsf3	chrX	protein_coding	heat shock transcription factor 3
chrX	95529964	95541580	+	95529964	95541454	A3SS	0.5	50	50	ENSMUST00000033553.14	ENSMUSG00000031209.15	Heph	chrX	protein_coding	hephaestin
chrX	95500221	95503181	+	95499319	95503181	A5SS	0.5	50	50	ENSMUST00000033553.14	ENSMUSG00000031209.15	Heph	chrX	protein_coding	hephaestin
chrX	96414906	96420707	-	96414861	96420707	A3SS	0.5	50	50	ENSMUST00000037353.10	ENSMUSG00000034457.11	Eda2r	chrX	protein_coding	ectodysplasin A2 receptor
chrX	97776072	97824562	-	97776072;97807382	97807311;97824562	ES	0.5	50	50	ENSMUST00000033560.9	ENSMUSG00000031214.14	Ophn1	chrX	protein_coding	oligophrenin 1
chrX	97607286;97607939	97607898;97608322	-	97607286	97608322	cassetteExon	0.5	100	100	ENSMUST00000033560.9	ENSMUSG00000031214.14	Ophn1	chrX	protein_coding	oligophrenin 1
chrX	97917628	97933688	-	97846786	97933688	A3SS	0.5	50	50	ENSMUST00000033560.9	ENSMUSG00000031214.14	Ophn1	chrX	protein_coding	oligophrenin 1
chrX	97980927	97981792	+	97979951	97981792	A5SS	0.33	50	50	ENSMUST00000113811.8	ENSMUSG00000047694.13	Yipf6	chrX	protein_coding	Yip1 domain family, member 6
chrX	97980978	97981792	+	97979951	97981792	A5SS	0.33	50	50	ENSMUST00000113811.8	ENSMUSG00000047694.13	Yipf6	chrX	protein_coding	Yip1 domain family, member 6
chrX	97980978	97981792	+	97980927	97981792	A5SS	0.33	50	50	ENSMUST00000151353.8	ENSMUSG00000047694.13	Yipf6	chrX	protein_coding	Yip1 domain family, member 6
chrX	98086400	98104334	+	98060556	98104334	A5SS	0.33	50	50	ENSMUST00000149999.8	ENSMUSG00000031216.14	Stard8	chrX	protein_coding	START domain containing 8
chrX	98087719	98104334	+	98060556	98104334	A5SS	0.33	50	50	ENSMUST00000149999.8	ENSMUSG00000031216.14	Stard8	chrX	protein_coding	START domain containing 8
chrX	98087719	98104334	+	98086400	98104334	A5SS	0.33	50	50	ENSMUST00000036606.14	ENSMUSG00000031216.14	Stard8	chrX	protein_coding	START domain containing 8
chrX	98104405	98106971	+	98104405	98109164	A3SS	0.5	50	50	ENSMUST00000145820.2	ENSMUSG00000031216.14	Stard8	chrX	protein_coding	START domain containing 8
chrX	98108063	98109164	+	98104405	98109164	A5SS	0.5	50	50	ENSMUST00000145820.2	ENSMUSG00000031216.14	Stard8	chrX	protein_coding	START domain containing 8
chrX	98181930	98188898	+	98180619	98188898	A5SS	0.5	50	50	ENSMUST00000052839.7	ENSMUSG00000031217.9	Efnb1	chrX	protein_coding	ephrin B1
chrX	98512206	98514223	-	98511920	98514223	A3SS	0.5	50	50	ENSMUST00000113792.2	ENSMUSG00000034403.17	Pja1	chrX	protein_coding	praja ring finger ubiquitin ligase 1
chrX	98511179	98511729	-	98511188	98511729	A3SS	0.5	50	50	ENSMUST00000113790.8	ENSMUSG00000034403.17	Pja1	chrX	protein_coding	praja ring finger ubiquitin ligase 1
chrX	99353705;99425084	99425061;99433308	+	99353705	99433308	cassetteExon	0.5	100	100	ENSMUST00000113781.8	ENSMUSG00000059327.10	Eda	chrX	protein_coding	ectodysplasin-A
chrX	99438749;99439419	99439281;99440511	+	99438749	99440511	cassetteExon	0.5	100	100	ENSMUST00000113781.8	ENSMUSG00000059327.10	Eda	chrX	protein_coding	ectodysplasin-A
chrX	99438749;99439436	99439281;99440511	+	99438749	99440511	cassetteExon	0.5	100	100	ENSMUST00000113781.8	ENSMUSG00000059327.10	Eda	chrX	protein_coding	ectodysplasin-A
chrX	99435990	99437771	+	99435990	99438634	A3SS	0.33	50	50	ENSMUST00000113781.8	ENSMUSG00000059327.10	Eda	chrX	protein_coding	ectodysplasin-A
chrX	99435990	99438625	+	99435990	99438634	A3SS	0.33	50	50	ENSMUST00000113781.8	ENSMUSG00000059327.10	Eda	chrX	protein_coding	ectodysplasin-A
chrX	99428865	99433308	+	99353705	99433308	A5SS	0.25	50	50	ENSMUST00000113781.8	ENSMUSG00000059327.10	Eda	chrX	protein_coding	ectodysplasin-A
chrX	99430978	99433308	+	99353705	99433308	A5SS	0.25	50	50	ENSMUST00000113781.8	ENSMUSG00000059327.10	Eda	chrX	protein_coding	ectodysplasin-A
chrX	99438713	99440511	+	99438749	99440511	A5SS	0.2	50	50	ENSMUST00000113781.8	ENSMUSG00000059327.10	Eda	chrX	protein_coding	ectodysplasin-A
chrX	99438755	99440511	+	99438749	99440511	A5SS	0.2	50	50	ENSMUST00000113781.8	ENSMUSG00000059327.10	Eda	chrX	protein_coding	ectodysplasin-A
chrX	99435990	99437771	+	99435990	99438625	A3SS	0.33	50	50	ENSMUST00000113783.8	ENSMUSG00000059327.10	Eda	chrX	protein_coding	ectodysplasin-A
chrX	99438713	99440511	+	99438755	99440511	A5SS	0.2	50	50	ENSMUST00000113783.8	ENSMUSG00000059327.10	Eda	chrX	protein_coding	ectodysplasin-A
chrX	99439419	99440511	+	99438755	99440511	A5SS	0.2	50	50	ENSMUST00000113783.8	ENSMUSG00000059327.10	Eda	chrX	protein_coding	ectodysplasin-A
chrX	99439436	99440511	+	99438755	99440511	A5SS	0.2	50	50	ENSMUST00000113783.8	ENSMUSG00000059327.10	Eda	chrX	protein_coding	ectodysplasin-A
chrX	99428865	99433308	+	99425084	99433308	A5SS	0.25	50	50	ENSMUST00000113779.8	ENSMUSG00000059327.10	Eda	chrX	protein_coding	ectodysplasin-A
chrX	99430978	99433308	+	99425084	99433308	A5SS	0.25	50	50	ENSMUST00000113779.8	ENSMUSG00000059327.10	Eda	chrX	protein_coding	ectodysplasin-A
chrX	99438713	99440511	+	99439436	99440511	A5SS&ES	0.2	50	50	ENSMUST00000113776.8	ENSMUSG00000059327.10	Eda	chrX	protein_coding	ectodysplasin-A
chrX	99439419	99440511	+	99439436	99440511	A5SS	0.2	50	50	ENSMUST00000113776.8	ENSMUSG00000059327.10	Eda	chrX	protein_coding	ectodysplasin-A
chrX	99438713	99440511	+	99439419	99440511	A5SS&ES	0.2	50	50	ENSMUST00000113775.8	ENSMUSG00000059327.10	Eda	chrX	protein_coding	ectodysplasin-A
chrX	99438749	99440511	+	99438749	99439281	3pMXE	0.5	50	50	ENSMUST00000113777.8	ENSMUSG00000059327.10	Eda	chrX	protein_coding	ectodysplasin-A
chrX	99430978	99433308	+	99428865	99433308	A5SS	0.25	50	50	ENSMUST00000145063.8	ENSMUSG00000059327.10	Eda	chrX	protein_coding	ectodysplasin-A
chrX	99449302	99467906	-	99449302	99456057	5pMXE	0.5	50	50	ENSMUST00000033567.15	ENSMUSG00000031220.15	Awat2	chrX	protein_coding	acyl-CoA wax alcohol acyltransferase 2
chrX	99586396	99588402	+	99587791	99588402	A5SS	0.5	50	50	ENSMUST00000140551.2	ENSMUSG00000067597.6	Dgat2l6	chrX	protein_coding	diacylglycerol O-acyltransferase 2-like 6
chrX	99650972	99655351	+	99650972	99655354	A3SS	0.5	50	50	ENSMUST00000113769.8	ENSMUSG00000060890.12	Arr3	chrX	protein_coding	arrestin 3, retinal
chrX	99657519	99657623	+	99657519	99657737	A3SS	0.5	50	50	ENSMUST00000113769.8	ENSMUSG00000060890.12	Arr3	chrX	protein_coding	arrestin 3, retinal
chrX	99649310	99650222	+	99649189	99650222	A5SS	0.5	50	50	ENSMUST00000113769.8	ENSMUSG00000060890.12	Arr3	chrX	protein_coding	arrestin 3, retinal
chrX	99650833	99650928	+	99650730	99650928	A5SS	0.5	50	50	ENSMUST00000113769.8	ENSMUSG00000060890.12	Arr3	chrX	protein_coding	arrestin 3, retinal
chrX	99668993	99669422	-	99668993	99669492	A5SS	0.5	50	50	ENSMUST00000015812.12	ENSMUSG00000015668.14	Pdzd11	chrX	protein_coding	PDZ domain containing 11
chrX	99761014	99762100	+	99761014;99761641	99761543;99762100	ES	0.5	50	50	ENSMUST00000048962.4	ENSMUSG00000034311.4	Kif4	chrX	protein_coding	kinesin family member 4
chrX	99773801	99775678	+	99773673	99775678	A5SS	0.33	50	50	ENSMUST00000144912.8	ENSMUSG00000019359.15	Gdpd2	chrX	protein_coding	glycerophosphodiester phosphodiesterase domain containing 2
chrX	99773977	99775678	+	99773673	99775678	A5SS	0.33	50	50	ENSMUST00000144912.8	ENSMUSG00000019359.15	Gdpd2	chrX	protein_coding	glycerophosphodiester phosphodiesterase domain containing 2
chrX	99773977	99775678	+	99773801	99775678	A5SS	0.33	50	50	ENSMUST00000156336.2	ENSMUSG00000019359.15	Gdpd2	chrX	protein_coding	glycerophosphodiester phosphodiesterase domain containing 2
chrX	99812034;99814966	99814913;99815221	+	99812034	99815221	cassetteExon	0.5	100	100	ENSMUST00000000901.13	ENSMUSG00000000881.13	Dlg3	chrX	protein_coding	discs large MAGUK scaffold protein 3
chrX	99853513;99855149	99855108;99856332	+	99853513	99856332	cassetteExon	0.5	100	100	ENSMUST00000000901.13	ENSMUSG00000000881.13	Dlg3	chrX	protein_coding	discs large MAGUK scaffold protein 3
chrX	99850861	99851659	+	99850861	99853468	A3SS	0.5	50	50	ENSMUST00000000901.13	ENSMUSG00000000881.13	Dlg3	chrX	protein_coding	discs large MAGUK scaffold protein 3
chrX	99818550	99819413	+	99817837	99819413	A5SS	0.5	50	50	ENSMUST00000000901.13	ENSMUSG00000000881.13	Dlg3	chrX	protein_coding	discs large MAGUK scaffold protein 3
chrX	99820978	99840292	+	99820087	99840292	A5SS	0.5	50	50	ENSMUST00000000901.13	ENSMUSG00000000881.13	Dlg3	chrX	protein_coding	discs large MAGUK scaffold protein 3
chrX	99850861;99851758	99851659;99855108	+	99850861;99853513	99853468;99855108	MXE	0.5	100	100	ENSMUST00000087984.11	ENSMUSG00000000881.13	Dlg3	chrX	protein_coding	discs large MAGUK scaffold protein 3
chrX	99850861;99853513	99853468;99856332	+	99850861;99855149	99851659;99856332	MXE	0.5	100	100	ENSMUST00000147863.8	ENSMUSG00000000881.13	Dlg3	chrX	protein_coding	discs large MAGUK scaffold protein 3
chrX	99853513	99855108	+	99851758	99855108	A5SS	0.5	50	50	ENSMUST00000146772.2	ENSMUSG00000000881.13	Dlg3	chrX	protein_coding	discs large MAGUK scaffold protein 3
chrX	99853513	99856332	+	99855149	99856332	A5SS&ES	0.5	50	50	ENSMUST00000146772.2	ENSMUSG00000000881.13	Dlg3	chrX	protein_coding	discs large MAGUK scaffold protein 3
chrX	99921831	99923583	-	99920214	99923583	A3SS	0.5	50	50	ENSMUST00000009814.10	ENSMUSG00000009670.12	Tex11	chrX	protein_coding	testis expressed gene 11
chrX	100127880;100128584	100128427;100128878	-	100127880	100128878	cassetteExon	0.5	100	100	ENSMUST00000138162.2	ENSMUSG00000031297.15	Slc7a3	chrX	protein_coding	solute carrier family 7 (cationic amino acid transporter, y+ system), member 3
chrX	100255952	100257380	-	100146041	100257380	A3SS	0.5	50	50	ENSMUST00000156473.8	ENSMUSG00000046032.17	Snx12	chrX	protein_coding	sorting nexin 12
chrX	100298879	100299719	+	100298879	100301783	A3SS	0.5	50	50	ENSMUST00000062000.6	ENSMUSG00000042903.9	Foxo4	chrX	protein_coding	forkhead box O4
chrX	100307326	100307431	-	100307352	100307431	A3SS	0.5	50	50	ENSMUST00000125656.2	ENSMUSG00000090141.2	Gm614	chrX	protein_coding	predicted gene 614
chrX	100307326	100308571	-	100307326	100307431	5pMXE	0.5	50	50	ENSMUST00000101358.3	ENSMUSG00000090141.2	Gm614	chrX	protein_coding	predicted gene 614
chrX	100309048	100309787	-	100309048;100309332	100309236;100309787	ES	0.5	50	50	ENSMUST00000117736.2	ENSMUSG00000092463.2	Gm20489	chrX	protein_coding	predicted gene 20489
chrX	100311101	100311317	-	100311101	100312559	A5SS	0.5	50	50	ENSMUST00000117736.2	ENSMUSG00000092463.2	Gm20489	chrX	protein_coding	predicted gene 20489
chrX	100337476	100337543	+	100337476	100337564	A3SS	0.5	50	50	ENSMUST00000117706.8	ENSMUSG00000079487.12	Med12	chrX	protein_coding	mediator complex subunit 12
chrX	100339694	100340199	+	100339694	100340223	A3SS	0.5	50	50	ENSMUST00000117706.8	ENSMUSG00000079487.12	Med12	chrX	protein_coding	mediator complex subunit 12
chrX	100337227	100337399	+	100337236	100337399	A5SS	0.5	50	50	ENSMUST00000117706.8	ENSMUSG00000079487.12	Med12	chrX	protein_coding	mediator complex subunit 12
chrX	100346037	100350681	+	100346037;100346737	100346678;100350681	ES	0.5	50	50	ENSMUST00000113671.3	ENSMUSG00000096056.2	Gm21986	chrX	lncRNA	predicted gene 21986
chrX	100342902	100345391	+	100342056	100345391	A5SS	0.33	50	50	ENSMUST00000113671.3	ENSMUSG00000096056.2	Gm21986	chrX	lncRNA	predicted gene 21986
chrX	100344556	100345391	+	100342056	100345391	A5SS	0.33	50	50	ENSMUST00000113671.3	ENSMUSG00000096056.2	Gm21986	chrX	lncRNA	predicted gene 21986
chrX	100358223	100358738	+	100352512	100358738	A5SS	0.5	50	50	ENSMUST00000113671.3	ENSMUSG00000096056.2	Gm21986	chrX	lncRNA	predicted gene 21986
chrX	100346037	100352363	+	100346037;100350740	100350681;100352363	ES	0.5	50	50	ENSMUST00000118111.8	ENSMUSG00000031302.17	Nlgn3	chrX	protein_coding	neuroligin 3
chrX	100342902	100345391	+	100342902	100345894	A3SS	0.5	50	50	ENSMUST00000118111.8	ENSMUSG00000031302.17	Nlgn3	chrX	protein_coding	neuroligin 3
chrX	100346037	100346678	+	100346037	100352363	A3SS	0.33	50	50	ENSMUST00000130555.8	ENSMUSG00000031302.17	Nlgn3	chrX	protein_coding	neuroligin 3
chrX	100344556	100345391	+	100342902	100345391	A5SS	0.33	50	50	ENSMUST00000130555.8	ENSMUSG00000031302.17	Nlgn3	chrX	protein_coding	neuroligin 3
chrX	100420965	100427758	+	100420018	100427758	A5SS	0.33	50	50	ENSMUST00000119080.8	ENSMUSG00000047797.15	Gjb1	chrX	protein_coding	gap junction protein, beta 1
chrX	100427448	100427758	+	100420018	100427758	A5SS	0.33	50	50	ENSMUST00000119080.8	ENSMUSG00000047797.15	Gjb1	chrX	protein_coding	gap junction protein, beta 1
chrX	100427448	100427758	+	100420965	100427758	A5SS	0.33	50	50	ENSMUST00000052130.14	ENSMUSG00000047797.15	Gjb1	chrX	protein_coding	gap junction protein, beta 1
chrX	100459544	100460515	-	100459544;100460067	100459773;100460515	ES	0.5	50	50	ENSMUST00000117901.8	ENSMUSG00000031310.17	Zmym3	chrX	protein_coding	zinc finger, MYM-type 3
chrX	100460067	100460893	-	100460067;100460587	100460515;100460893	ES	0.33	50	50	ENSMUST00000117901.8	ENSMUSG00000031310.17	Zmym3	chrX	protein_coding	zinc finger, MYM-type 3
chrX	100460936	100463304	-	100460936;100462558	100461879;100463304	ES	0.5	50	50	ENSMUST00000117901.8	ENSMUSG00000031310.17	Zmym3	chrX	protein_coding	zinc finger, MYM-type 3
chrX	100462558	100463752	-	100462558	100463304	5pMXE	0.2	50	50	ENSMUST00000117901.8	ENSMUSG00000031310.17	Zmym3	chrX	protein_coding	zinc finger, MYM-type 3
chrX	100462558	100463765	-	100462558	100463304	5pMXE	0.2	50	50	ENSMUST00000117901.8	ENSMUSG00000031310.17	Zmym3	chrX	protein_coding	zinc finger, MYM-type 3
chrX	100462558	100463934	-	100462558	100463304	5pMXE	0.2	50	50	ENSMUST00000117901.8	ENSMUSG00000031310.17	Zmym3	chrX	protein_coding	zinc finger, MYM-type 3
chrX	100462558	100464146	-	100462558	100463304	5pMXE	0.2	50	50	ENSMUST00000117901.8	ENSMUSG00000031310.17	Zmym3	chrX	protein_coding	zinc finger, MYM-type 3
chrX	100449625;100451065	100450811;100452083	-	100449625	100452083	cassetteExon	0.5	100	100	ENSMUST00000117901.8	ENSMUSG00000031310.17	Zmym3	chrX	protein_coding	zinc finger, MYM-type 3
chrX	100460581	100460893	-	100460587	100460893	A3SS	0.33	50	50	ENSMUST00000117901.8	ENSMUSG00000031310.17	Zmym3	chrX	protein_coding	zinc finger, MYM-type 3
chrX	100452911	100453218	-	100452911	100453239	A5SS	0.5	50	50	ENSMUST00000117901.8	ENSMUSG00000031310.17	Zmym3	chrX	protein_coding	zinc finger, MYM-type 3
chrX	100455900	100456020	-	100455900	100455984	A5SS	0.5	50	50	ENSMUST00000117901.8	ENSMUSG00000031310.17	Zmym3	chrX	protein_coding	zinc finger, MYM-type 3
chrX	100460936	100461029	-	100460936	100461879	A5SS	0.25	50	50	ENSMUST00000117901.8	ENSMUSG00000031310.17	Zmym3	chrX	protein_coding	zinc finger, MYM-type 3
chrX	100460936	100462401	-	100460936	100461879	A5SS	0.25	50	50	ENSMUST00000117901.8	ENSMUSG00000031310.17	Zmym3	chrX	protein_coding	zinc finger, MYM-type 3
chrX	100460067	100460893	-	100460067;100460581	100460515;100460893	ES	0.33	50	50	ENSMUST00000121520.8	ENSMUSG00000031310.17	Zmym3	chrX	protein_coding	zinc finger, MYM-type 3
chrX	100460936	100463304	-	100460936	100461879	A5SS&ES	0.25	50	50	ENSMUST00000120107.8	ENSMUSG00000031310.17	Zmym3	chrX	protein_coding	zinc finger, MYM-type 3
chrX	100462558	100463765	-	100462558	100463752	A5SS	0.2	50	50	ENSMUST00000120107.8	ENSMUSG00000031310.17	Zmym3	chrX	protein_coding	zinc finger, MYM-type 3
chrX	100462558	100463934	-	100462558	100463752	A5SS	0.2	50	50	ENSMUST00000120107.8	ENSMUSG00000031310.17	Zmym3	chrX	protein_coding	zinc finger, MYM-type 3
chrX	100462558	100464146	-	100462558	100463752	A5SS	0.2	50	50	ENSMUST00000120107.8	ENSMUSG00000031310.17	Zmym3	chrX	protein_coding	zinc finger, MYM-type 3
chrX	100460936	100462401	-	100460936	100461029	5pMXE	0.25	50	50	ENSMUST00000137416.8	ENSMUSG00000031310.17	Zmym3	chrX	protein_coding	zinc finger, MYM-type 3
chrX	100460936	100463304	-	100460936	100461029	5pMXE	0.25	50	50	ENSMUST00000137416.8	ENSMUSG00000031310.17	Zmym3	chrX	protein_coding	zinc finger, MYM-type 3
chrX	100460067	100460893	-	100460067	100460515	A5SS	0.5	50	50	ENSMUST00000141895.2	ENSMUSG00000031310.17	Zmym3	chrX	protein_coding	zinc finger, MYM-type 3
chrX	100459544;100460067	100459773;100460893	-	100459544;100460587	100460515;100460893	MXE	0.5	100	100	ENSMUST00000117637.8	ENSMUSG00000031310.17	Zmym3	chrX	protein_coding	zinc finger, MYM-type 3
chrX	100462558	100463765	-	100462558	100464146	A5SS	0.2	50	50	ENSMUST00000121429.8	ENSMUSG00000031310.17	Zmym3	chrX	protein_coding	zinc finger, MYM-type 3
chrX	100462558	100463934	-	100462558	100464146	A5SS	0.2	50	50	ENSMUST00000121429.8	ENSMUSG00000031310.17	Zmym3	chrX	protein_coding	zinc finger, MYM-type 3
chrX	100462558	100463934	-	100462558	100463765	5pMXE	0.2	50	50	ENSMUST00000118092.8	ENSMUSG00000031310.17	Zmym3	chrX	protein_coding	zinc finger, MYM-type 3
chrX	100459544	100460515	-	100460067	100460515	3pMXE	0.5	50	50	ENSMUST00000147017.8	ENSMUSG00000031310.17	Zmym3	chrX	protein_coding	zinc finger, MYM-type 3
chrX	100460936;100462558	100462401;100463304	-	100460936	100463304	cassetteExon	0.5	100	100	ENSMUST00000147017.8	ENSMUSG00000031310.17	Zmym3	chrX	protein_coding	zinc finger, MYM-type 3
chrX	100473368	100474099	+	100472983	100474099	A5SS	0.5	50	50	ENSMUST00000147708.8	ENSMUSG00000031311.18	Nono	chrX	protein_coding	non-POU-domain-containing, octamer binding protein
chrX	100473368	100474102	+	100473368	100474099	A3SS	0.5	50	50	ENSMUST00000033673.7	ENSMUSG00000031311.18	Nono	chrX	protein_coding	non-POU-domain-containing, octamer binding protein
chrX	100488423	100488901	+	100488396	100488901	A5SS	0.5	50	50	ENSMUST00000033673.7	ENSMUSG00000031311.18	Nono	chrX	protein_coding	non-POU-domain-containing, octamer binding protein
chrX	100603550;100604554	100604540;100605680	+	100603550	100605680	cassetteExon	0.5	100	100	ENSMUST00000118878.8	ENSMUSG00000031314.19	Taf1	chrX	protein_coding	TATA-box binding protein associated factor 1
chrX	100634195;100634345	100634340;100637546	+	100634195	100637546	cassetteExon	0.5	100	100	ENSMUST00000118878.8	ENSMUSG00000031314.19	Taf1	chrX	protein_coding	TATA-box binding protein associated factor 1
chrX	100582793	100584366	+	100582793	100584429	A3SS	0.5	50	50	ENSMUST00000118878.8	ENSMUSG00000031314.19	Taf1	chrX	protein_coding	TATA-box binding protein associated factor 1
chrX	100638645	100638906	+	100637671	100638906	A5SS	0.5	50	50	ENSMUST00000118878.8	ENSMUSG00000031314.19	Taf1	chrX	protein_coding	TATA-box binding protein associated factor 1
chrX	100634195	100637546	+	100634195	100634340	3pMXE	0.5	50	50	ENSMUST00000211461.2	ENSMUSG00000031314.19	Taf1	chrX	protein_coding	TATA-box binding protein associated factor 1
chrX	100704937	100707449	+	100704937;100707160	100706965;100707449	ES	0.5	50	50	ENSMUST00000119299.8	ENSMUSG00000034160.14	Ogt	chrX	protein_coding	O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
chrX	100683928	100686582	+	100683928	100686612	A3SS	0.5	50	50	ENSMUST00000119299.8	ENSMUSG00000034160.14	Ogt	chrX	protein_coding	O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
chrX	100695814	100697582	+	100695814	100699230	A3SS	0.5	50	50	ENSMUST00000119299.8	ENSMUSG00000034160.14	Ogt	chrX	protein_coding	O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
chrX	100834254	100834845	-	100834254;100834504	100834441;100834845	ES	0.5	50	50	ENSMUST00000124577.8	ENSMUSG00000045010.15	Gm4779	chrX	protein_coding	predicted gene 4779
chrX	100841367	100841948	+	100841367;100841762	100841708;100841948	ES	0.33	50	50	ENSMUST00000163399.8	ENSMUSG00000046774.18	8030474K03Rik	chrX	protein_coding	RIKEN cDNA 8030474K03 gene
chrX	100841771	100841948	+	100841762	100841948	A5SS	0.33	50	50	ENSMUST00000163399.8	ENSMUSG00000046774.18	8030474K03Rik	chrX	protein_coding	RIKEN cDNA 8030474K03 gene
chrX	100841367;100841771	100841708;100841948	+	100841367	100841948	cassetteExon	0.5	100	100	ENSMUST00000151231.10	ENSMUSG00000046774.18	8030474K03Rik	chrX	protein_coding	RIKEN cDNA 8030474K03 gene
chrX	100893453	101114930	+	100893453	100991260	3pMXE	0.5	50	50	ENSMUST00000125115.2	ENSMUSG00000079481.12	Nhsl2	chrX	protein_coding	NHS-like 2
chrX	101117580	101119768	+	100991328	101119768	A5SS	0.5	50	50	ENSMUST00000124279.6	ENSMUSG00000079481.12	Nhsl2	chrX	protein_coding	NHS-like 2
chrX	101117580	101121088	+	101117580;101119899	101119768;101121088	ES	0.25	50	50	ENSMUST00000101339.8	ENSMUSG00000079481.12	Nhsl2	chrX	protein_coding	NHS-like 2
chrX	100893453;100991328	100991260;101119768	+	100893453;101117580	101114930;101119768	MXE	0.5	100	100	ENSMUST00000101339.8	ENSMUSG00000079481.12	Nhsl2	chrX	protein_coding	NHS-like 2
chrX	101005433	101121088	+	101119899	101121088	A5SS&ES	0.25	50	50	ENSMUST00000101339.8	ENSMUSG00000079481.12	Nhsl2	chrX	protein_coding	NHS-like 2
chrX	101048749	101121088	+	101119899	101121088	A5SS&ES	0.25	50	50	ENSMUST00000101339.8	ENSMUSG00000079481.12	Nhsl2	chrX	protein_coding	NHS-like 2
chrX	101094622	101114930	+	100893453	101114930	A5SS	0.5	50	50	ENSMUST00000101339.8	ENSMUSG00000079481.12	Nhsl2	chrX	protein_coding	NHS-like 2
chrX	101048749	101121088	+	101005433	101121088	A5SS	0.25	50	50	ENSMUST00000155477.2	ENSMUSG00000079481.12	Nhsl2	chrX	protein_coding	NHS-like 2
chrX	101117580	101121088	+	101005433	101121088	A5SS	0.25	50	50	ENSMUST00000155477.2	ENSMUSG00000079481.12	Nhsl2	chrX	protein_coding	NHS-like 2
chrX	101117580	101121088	+	101048749	101121088	A5SS	0.25	50	50	ENSMUST00000144753.2	ENSMUSG00000079481.12	Nhsl2	chrX	protein_coding	NHS-like 2
chrX	101110723	101111134	-	101110723	101111160	A5SS	0.5	50	50	ENSMUST00000119076.9	ENSMUSG00000049191.13	Rtl5	chrX	protein_coding	retrotransposon Gag like 5
chrX	101163336	101165274	+	101163170	101165274	A5SS	0.5	50	50	ENSMUST00000113627.4	ENSMUSG00000079480.4	Pin4	chrX	protein_coding	protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)
chrX	101292293	101294119	-	101292293	101295640	A5SS	0.2	50	50	ENSMUST00000050551.10	ENSMUSG00000051159.17	Cited1	chrX	protein_coding	Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
chrX	101292293	101294366	-	101292293	101295640	A5SS	0.2	50	50	ENSMUST00000050551.10	ENSMUSG00000051159.17	Cited1	chrX	protein_coding	Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
chrX	101292293	101295099	-	101292293	101295640	A5SS	0.2	50	50	ENSMUST00000050551.10	ENSMUSG00000051159.17	Cited1	chrX	protein_coding	Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
chrX	101292293	101295466	-	101292293	101295640	A5SS	0.2	50	50	ENSMUST00000050551.10	ENSMUSG00000051159.17	Cited1	chrX	protein_coding	Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
chrX	101292293	101295466	-	101292293	101295099	5pMXE	0.2	50	50	ENSMUST00000101336.10	ENSMUSG00000051159.17	Cited1	chrX	protein_coding	Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
chrX	101292293	101294119	-	101292293	101295099	A5SS	0.2	50	50	ENSMUST00000101336.10	ENSMUSG00000051159.17	Cited1	chrX	protein_coding	Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
chrX	101292293	101294366	-	101292293	101295099	A5SS	0.2	50	50	ENSMUST00000101336.10	ENSMUSG00000051159.17	Cited1	chrX	protein_coding	Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
chrX	101292293	101295466	-	101292293	101294366	5pMXE	0.2	50	50	ENSMUST00000134887.8	ENSMUSG00000051159.17	Cited1	chrX	protein_coding	Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
chrX	101292293	101294119	-	101292293	101294366	A5SS	0.2	50	50	ENSMUST00000134887.8	ENSMUSG00000051159.17	Cited1	chrX	protein_coding	Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
chrX	101292293	101295466	-	101292293	101294119	5pMXE	0.2	50	50	ENSMUST00000130589.2	ENSMUSG00000051159.17	Cited1	chrX	protein_coding	Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
chrX	101297219	101300046	+	101297219	101346551	A3SS	0.5	50	50	ENSMUST00000144761.8	ENSMUSG00000085568.8	Gm14858	chrX	lncRNA	predicted gene 14858
chrX	101296630	101297086	+	101296423	101297086	A5SS	0.5	50	50	ENSMUST00000144761.8	ENSMUSG00000085568.8	Gm14858	chrX	lncRNA	predicted gene 14858
chrX	101541878	101548005	-	101541878;101543558	101543428;101548005	ES	0.5	50	50	ENSMUST00000087916.11	ENSMUSG00000067567.13	Hdac8	chrX	protein_coding	histone deacetylase 8
chrX	101452571	101471721	-	101449315	101471721	A3SS	0.33	50	50	ENSMUST00000087916.11	ENSMUSG00000067567.13	Hdac8	chrX	protein_coding	histone deacetylase 8
chrX	101459199	101471721	-	101449315	101471721	A3SS	0.33	50	50	ENSMUST00000087916.11	ENSMUSG00000067567.13	Hdac8	chrX	protein_coding	histone deacetylase 8
chrX	101459199	101471721	-	101452571	101471721	A3SS	0.33	50	50	ENSMUST00000148481.8	ENSMUSG00000067567.13	Hdac8	chrX	protein_coding	histone deacetylase 8
chrX	101564530	101575683	-	101564530;101571723	101571673;101575683	ES	0.5	50	50	ENSMUST00000052012.14	ENSMUSG00000034055.17	Phka1	chrX	protein_coding	phosphorylase kinase alpha 1
chrX	101599223	101603171	-	101599223;101600878	101600702;101603171	ES	0.5	50	50	ENSMUST00000052012.14	ENSMUSG00000034055.17	Phka1	chrX	protein_coding	phosphorylase kinase alpha 1
chrX	101564530;101575566	101575528;101576009	-	101564530;101575721	101571673;101576009	MXE	0.5	100	100	ENSMUST00000052012.14	ENSMUSG00000034055.17	Phka1	chrX	protein_coding	phosphorylase kinase alpha 1
chrX	101571723;101575566	101575528;101576009	-	101571723;101575721	101575683;101576009	MXE	0.5	100	100	ENSMUST00000052012.14	ENSMUSG00000034055.17	Phka1	chrX	protein_coding	phosphorylase kinase alpha 1
chrX	101564530;101575566	101575528;101576009	-	101564530	101576009	cassetteExon	0.5	100	100	ENSMUST00000119229.8	ENSMUSG00000034055.17	Phka1	chrX	protein_coding	phosphorylase kinase alpha 1
chrX	101564530;101575721	101575528;101576009	-	101564530	101576009	cassetteExon	0.5	100	100	ENSMUST00000119229.8	ENSMUSG00000034055.17	Phka1	chrX	protein_coding	phosphorylase kinase alpha 1
chrX	101564530;101575721	101575683;101576009	-	101564530	101576009	cassetteExon	0.5	100	100	ENSMUST00000119229.8	ENSMUSG00000034055.17	Phka1	chrX	protein_coding	phosphorylase kinase alpha 1
chrX	101564530	101571673	-	101564530	101576009	A5SS	0.25	50	50	ENSMUST00000119229.8	ENSMUSG00000034055.17	Phka1	chrX	protein_coding	phosphorylase kinase alpha 1
chrX	101564530	101575528	-	101564530;101571723	101571673;101575528	ES	0.5	50	50	ENSMUST00000122022.8	ENSMUSG00000034055.17	Phka1	chrX	protein_coding	phosphorylase kinase alpha 1
chrX	101564530;101575721	101575683;101576009	-	101564530;101575566	101571673;101576009	MXE	0.5	100	100	ENSMUST00000122022.8	ENSMUSG00000034055.17	Phka1	chrX	protein_coding	phosphorylase kinase alpha 1
chrX	101564530;101575721	101575683;101576009	-	101564530;101575566	101575528;101576009	MXE	0.5	100	100	ENSMUST00000120270.8	ENSMUSG00000034055.17	Phka1	chrX	protein_coding	phosphorylase kinase alpha 1
chrX	101754883	101754966	+	101751532	101754966	A5SS	0.5	50	50	ENSMUST00000101324.9	ENSMUSG00000073027.11	Dmrtc1b	chrX	protein_coding	DMRT-like family C1b
chrX	101847854	101848306	+	101847051	101848306	A5SS	0.5	50	50	ENSMUST00000118218.8	ENSMUSG00000067562.12	Dmrtc1c1	chrX	protein_coding	DMRT-like family C1c1
chrX	101896485	101897740	-	101896485	101896937	5pMXE	0.5	50	50	ENSMUST00000087896.11	ENSMUSG00000067561.13	Dmrtc1c2	chrX	protein_coding	DMRT-like family C1c2
chrX	101908774	101911495	-	101908774	101909820	5pMXE	0.5	50	50	ENSMUST00000048061.13	ENSMUSG00000032894.14	1700031F05Rik	chrX	protein_coding	RIKEN cDNA 1700031F05 gene
chrX	101947452	101948356	-	101947369	101948356	A3SS	0.5	50	50	ENSMUST00000119624.8	ENSMUSG00000031323.9	Dmrtc1a	chrX	protein_coding	DMRT-like family C1a
chrX	101948485	101948661	-	101948485	101948667	A5SS	0.5	50	50	ENSMUST00000119624.8	ENSMUSG00000031323.9	Dmrtc1a	chrX	protein_coding	DMRT-like family C1a
chrX	102273780	102277628	-	102273780;102276547	102276408;102277628	ES	0.5	50	50	ENSMUST00000033688.12	ENSMUSG00000031325.16	4930519F16Rik	chrX	transcribed_unitary_pseudogene	RIKEN cDNA 4930519F16 gene
chrX	102277875	102296610	-	102277875	102299430	A5SS	0.5	50	50	ENSMUST00000033688.12	ENSMUSG00000031325.16	4930519F16Rik	chrX	transcribed_unitary_pseudogene	RIKEN cDNA 4930519F16 gene
chrX	102277875	102296610	-	102277875	102355239	A5SS	0.2	50	50	ENSMUST00000127012.9	ENSMUSG00000031325.16	4930519F16Rik	chrX	transcribed_unitary_pseudogene	RIKEN cDNA 4930519F16 gene
chrX	102277875	102299430	-	102277875	102355239	A5SS	0.2	50	50	ENSMUST00000127012.9	ENSMUSG00000031325.16	4930519F16Rik	chrX	transcribed_unitary_pseudogene	RIKEN cDNA 4930519F16 gene
chrX	102277875	102331479	-	102277875	102355239	A5SS	0.2	50	50	ENSMUST00000127012.9	ENSMUSG00000031325.16	4930519F16Rik	chrX	transcribed_unitary_pseudogene	RIKEN cDNA 4930519F16 gene
chrX	102277875	102341783	-	102277875	102355239	A5SS	0.2	50	50	ENSMUST00000127012.9	ENSMUSG00000031325.16	4930519F16Rik	chrX	transcribed_unitary_pseudogene	RIKEN cDNA 4930519F16 gene
chrX	102277875	102331479	-	102277875	102296610	5pMXE	0.2	50	50	ENSMUST00000182224.8	ENSMUSG00000031325.16	4930519F16Rik	chrX	transcribed_unitary_pseudogene	RIKEN cDNA 4930519F16 gene
chrX	102277875	102341783	-	102277875	102296610	5pMXE	0.2	50	50	ENSMUST00000182224.8	ENSMUSG00000031325.16	4930519F16Rik	chrX	transcribed_unitary_pseudogene	RIKEN cDNA 4930519F16 gene
chrX	102273780	102277628	-	102276547	102277628	3pMXE	0.5	50	50	ENSMUST00000133491.8	ENSMUSG00000031325.16	4930519F16Rik	chrX	transcribed_unitary_pseudogene	RIKEN cDNA 4930519F16 gene
chrX	102277875	102299430	-	102277875	102341783	A5SS	0.2	50	50	ENSMUST00000182605.8	ENSMUSG00000031325.16	4930519F16Rik	chrX	transcribed_unitary_pseudogene	RIKEN cDNA 4930519F16 gene
chrX	102277875	102331479	-	102277875	102341783	A5SS	0.2	50	50	ENSMUST00000182605.8	ENSMUSG00000031325.16	4930519F16Rik	chrX	transcribed_unitary_pseudogene	RIKEN cDNA 4930519F16 gene
chrX	102277875	102299430	-	102277875	102331479	A5SS	0.2	50	50	ENSMUST00000183315.2	ENSMUSG00000031325.16	4930519F16Rik	chrX	transcribed_unitary_pseudogene	RIKEN cDNA 4930519F16 gene
chrX	102465652	102524881	+	102465652	102467870	3pMXE	0.5	50	50	ENSMUST00000033691.5	ENSMUSG00000031329.5	Tsx	chrX	protein_coding	testis specific X-linked gene
chrX	102491920	102524881	+	102465652	102524881	A5SS	0.33	50	50	ENSMUST00000182089.2	ENSMUSG00000098078.2	Gm26992	chrX	protein_coding	predicted gene, 26992
chrX	102493458	102524881	+	102465652	102524881	A5SS	0.33	50	50	ENSMUST00000182089.2	ENSMUSG00000098078.2	Gm26992	chrX	protein_coding	predicted gene, 26992
chrX	102493458	102524881	+	102491920	102524881	A5SS	0.5	50	50	ENSMUST00000152916.2	ENSMUSG00000085715.3	Tsix	chrX	lncRNA	X (inactive)-specific transcript, opposite strand
chrX	102537306	102540044	+	102537306	102550971	A3SS	0.5	50	50	ENSMUST00000234690.2	ENSMUSG00000097571.10	Jpx	chrX	lncRNA	Jpx transcript, Xist activator (non-protein coding)
chrX	102546536	102552876	+	102551192	102552876	A5SS&ES	0.5	50	50	ENSMUST00000234690.2	ENSMUSG00000097571.10	Jpx	chrX	lncRNA	Jpx transcript, Xist activator (non-protein coding)
chrX	102540136	102568473	+	102540136	102546466	3pMXE	0.5	50	50	ENSMUST00000181020.9	ENSMUSG00000097571.10	Jpx	chrX	lncRNA	Jpx transcript, Xist activator (non-protein coding)
chrX	102537553	102540044	+	102537306	102540044	A5SS	0.5	50	50	ENSMUST00000181020.9	ENSMUSG00000097571.10	Jpx	chrX	lncRNA	Jpx transcript, Xist activator (non-protein coding)
chrX	102540199	102546466	+	102540136	102546466	A5SS	0.33	50	50	ENSMUST00000181020.9	ENSMUSG00000097571.10	Jpx	chrX	lncRNA	Jpx transcript, Xist activator (non-protein coding)
chrX	102544928	102546466	+	102540136	102546466	A5SS	0.33	50	50	ENSMUST00000181020.9	ENSMUSG00000097571.10	Jpx	chrX	lncRNA	Jpx transcript, Xist activator (non-protein coding)
chrX	102537306;102551192	102550971;102552876	+	102537306;102546536	102540044;102552876	MXE	0.5	100	100	ENSMUST00000235041.2	ENSMUSG00000097571.10	Jpx	chrX	lncRNA	Jpx transcript, Xist activator (non-protein coding)
chrX	102568602	102608573	+	102568602	102573251	3pMXE	0.33	50	50	ENSMUST00000234244.2	ENSMUSG00000097571.10	Jpx	chrX	lncRNA	Jpx transcript, Xist activator (non-protein coding)
chrX	102568602;102571528	102571495;102573251	+	102568602	102573251	cassetteExon	0.5	100	100	ENSMUST00000234244.2	ENSMUSG00000097571.10	Jpx	chrX	lncRNA	Jpx transcript, Xist activator (non-protein coding)
chrX	102568602	102571495	+	102568602	102608573	A3SS	0.33	50	50	ENSMUST00000234173.2	ENSMUSG00000097571.10	Jpx	chrX	lncRNA	Jpx transcript, Xist activator (non-protein coding)
chrX	102561963	102568473	+	102540136	102568473	A5SS	0.5	50	50	ENSMUST00000234173.2	ENSMUSG00000097571.10	Jpx	chrX	lncRNA	Jpx transcript, Xist activator (non-protein coding)
chrX	102544928	102546466	+	102540199	102546466	A5SS	0.33	50	50	ENSMUST00000182447.2	ENSMUSG00000097571.10	Jpx	chrX	lncRNA	Jpx transcript, Xist activator (non-protein coding)
chrX	102653022	102658671	-	102653022;102656801	102656629;102658671	ES	0.5	50	50	ENSMUST00000130063.8	ENSMUSG00000086370.10	Ftx	chrX	lncRNA	Ftx transcript, Xist regulator (non-protein coding)
chrX	102646695;102649225	102648821;102649924	-	102646695	102649924	cassetteExon	0.5	100	100	ENSMUST00000130063.8	ENSMUSG00000086370.10	Ftx	chrX	lncRNA	Ftx transcript, Xist regulator (non-protein coding)
chrX	102646695;102649225	102649064;102649924	-	102646695	102649924	cassetteExon	0.5	100	100	ENSMUST00000130063.8	ENSMUSG00000086370.10	Ftx	chrX	lncRNA	Ftx transcript, Xist regulator (non-protein coding)
chrX	102616167	102639537	-	102608178	102639537	A3SS	0.25	50	50	ENSMUST00000130063.8	ENSMUSG00000086370.10	Ftx	chrX	lncRNA	Ftx transcript, Xist regulator (non-protein coding)
chrX	102625621	102639537	-	102608178	102639537	A3SS	0.25	50	50	ENSMUST00000130063.8	ENSMUSG00000086370.10	Ftx	chrX	lncRNA	Ftx transcript, Xist regulator (non-protein coding)
chrX	102635512	102639537	-	102608178	102639537	A3SS	0.25	50	50	ENSMUST00000130063.8	ENSMUSG00000086370.10	Ftx	chrX	lncRNA	Ftx transcript, Xist regulator (non-protein coding)
chrX	102651398	102651784	-	102651398	102652910	A5SS	0.5	50	50	ENSMUST00000130063.8	ENSMUSG00000086370.10	Ftx	chrX	lncRNA	Ftx transcript, Xist regulator (non-protein coding)
chrX	102653022	102656650	-	102653022	102656629	A5SS	0.33	50	50	ENSMUST00000130063.8	ENSMUSG00000086370.10	Ftx	chrX	lncRNA	Ftx transcript, Xist regulator (non-protein coding)
chrX	102658798	102660338	-	102658798	102667153	A5SS	0.2	50	50	ENSMUST00000130063.8	ENSMUSG00000086370.10	Ftx	chrX	lncRNA	Ftx transcript, Xist regulator (non-protein coding)
chrX	102658798	102660466	-	102658798	102667153	A5SS	0.2	50	50	ENSMUST00000130063.8	ENSMUSG00000086370.10	Ftx	chrX	lncRNA	Ftx transcript, Xist regulator (non-protein coding)
chrX	102658798	102665931	-	102658798	102667153	A5SS	0.2	50	50	ENSMUST00000130063.8	ENSMUSG00000086370.10	Ftx	chrX	lncRNA	Ftx transcript, Xist regulator (non-protein coding)
chrX	102658798	102666035	-	102658798	102667153	A5SS	0.2	50	50	ENSMUST00000130063.8	ENSMUSG00000086370.10	Ftx	chrX	lncRNA	Ftx transcript, Xist regulator (non-protein coding)
chrX	102658798	102660466	-	102658798	102660338	5pMXE	0.2	50	50	ENSMUST00000236107.2	ENSMUSG00000086370.10	Ftx	chrX	lncRNA	Ftx transcript, Xist regulator (non-protein coding)
chrX	102658798	102665931	-	102658798	102660338	5pMXE	0.2	50	50	ENSMUST00000236107.2	ENSMUSG00000086370.10	Ftx	chrX	lncRNA	Ftx transcript, Xist regulator (non-protein coding)
chrX	102658798	102666035	-	102658798	102660338	5pMXE	0.2	50	50	ENSMUST00000236107.2	ENSMUSG00000086370.10	Ftx	chrX	lncRNA	Ftx transcript, Xist regulator (non-protein coding)
chrX	102646695;102648915	102648821;102649064	-	102646695	102649064	cassetteExon	0.5	100	100	ENSMUST00000236107.2	ENSMUSG00000086370.10	Ftx	chrX	lncRNA	Ftx transcript, Xist regulator (non-protein coding)
chrX	102653022;102656801	102656650;102658671	-	102653022	102658671	cassetteExon	0.5	100	100	ENSMUST00000236107.2	ENSMUSG00000086370.10	Ftx	chrX	lncRNA	Ftx transcript, Xist regulator (non-protein coding)
chrX	102658798	102665931	-	102658798	102660466	5pMXE	0.2	50	50	ENSMUST00000156240.8	ENSMUSG00000086370.10	Ftx	chrX	lncRNA	Ftx transcript, Xist regulator (non-protein coding)
chrX	102658798	102666035	-	102658798	102660466	5pMXE	0.2	50	50	ENSMUST00000156240.8	ENSMUSG00000086370.10	Ftx	chrX	lncRNA	Ftx transcript, Xist regulator (non-protein coding)
chrX	102614481	102624119	-	102614481	102616106	A5SS&ES	0.5	50	50	ENSMUST00000237368.2	ENSMUSG00000086370.10	Ftx	chrX	lncRNA	Ftx transcript, Xist regulator (non-protein coding)
chrX	102635512	102639537	-	102625621	102639537	A3SS	0.33	50	50	ENSMUST00000237493.2	ENSMUSG00000086370.10	Ftx	chrX	lncRNA	Ftx transcript, Xist regulator (non-protein coding)
chrX	102625621	102628289	-	102625621	102639537	A5SS	0.5	50	50	ENSMUST00000237493.2	ENSMUSG00000086370.10	Ftx	chrX	lncRNA	Ftx transcript, Xist regulator (non-protein coding)
chrX	102625621	102639537	-	102616167	102639537	A3SS	0.33	50	50	ENSMUST00000145803.8	ENSMUSG00000086370.10	Ftx	chrX	lncRNA	Ftx transcript, Xist regulator (non-protein coding)
chrX	102635512	102639537	-	102616167	102639537	A3SS	0.33	50	50	ENSMUST00000145803.8	ENSMUSG00000086370.10	Ftx	chrX	lncRNA	Ftx transcript, Xist regulator (non-protein coding)
chrX	102616167	102624075	-	102616167	102639537	A5SS	0.5	50	50	ENSMUST00000145803.8	ENSMUSG00000086370.10	Ftx	chrX	lncRNA	Ftx transcript, Xist regulator (non-protein coding)
chrX	102614481;102616167	102616106;102639537	-	102614481;102625621	102624119;102639537	MXE	0.5	100	100	ENSMUST00000236231.2	ENSMUSG00000086370.10	Ftx	chrX	lncRNA	Ftx transcript, Xist regulator (non-protein coding)
chrX	102658798	102666035	-	102658798	102665931	5pMXE	0.2	50	50	ENSMUST00000238083.2	ENSMUSG00000086370.10	Ftx	chrX	lncRNA	Ftx transcript, Xist regulator (non-protein coding)
chrX	102755909	102777744	-	102755909	102864961	A5SS	0.5	50	50	ENSMUST00000042664.10	ENSMUSG00000033965.11	Slc16a2	chrX	protein_coding	solute carrier family 16 (monocarboxylic acid transporters), member 2
chrX	103022940	103024679	-	103022940	103024669	A5SS	0.5	50	50	ENSMUST00000121153.8	ENSMUSG00000056537.12	Rlim	chrX	protein_coding	ring finger protein, LIM domain interacting
chrX	103132612;103143287	103143232;103244239	-	103132612	103244239	cassetteExon	0.5	100	100	ENSMUST00000118314.8	ENSMUSG00000046449.16	Nexmif	chrX	protein_coding	neurite extension and migration factor
chrX	104112234;104112752	104112720;104113217	-	104112234	104113217	cassetteExon	0.5	100	100	ENSMUST00000127533.8	ENSMUSG00000087174.8	5530601H04Rik	chrX	lncRNA	RIKEN cDNA 5530601H04 gene
chrX	104087717	104091515	-	104083418	104091515	A3SS	0.5	50	50	ENSMUST00000127533.8	ENSMUSG00000087174.8	5530601H04Rik	chrX	lncRNA	RIKEN cDNA 5530601H04 gene
chrX	104087717	104110365	-	104091616	104110365	A3SS&ES	0.33	50	50	ENSMUST00000127533.8	ENSMUSG00000087174.8	5530601H04Rik	chrX	lncRNA	RIKEN cDNA 5530601H04 gene
chrX	104106734	104110365	-	104091616	104110365	A3SS	0.33	50	50	ENSMUST00000127533.8	ENSMUSG00000087174.8	5530601H04Rik	chrX	lncRNA	RIKEN cDNA 5530601H04 gene
chrX	104113305	104113606	-	104113281	104113606	A3SS	0.5	50	50	ENSMUST00000127533.8	ENSMUSG00000087174.8	5530601H04Rik	chrX	lncRNA	RIKEN cDNA 5530601H04 gene
chrX	104083418	104086210	-	104083418	104091515	A5SS	0.33	50	50	ENSMUST00000127533.8	ENSMUSG00000087174.8	5530601H04Rik	chrX	lncRNA	RIKEN cDNA 5530601H04 gene
chrX	104083418	104086731	-	104083418	104091515	A5SS	0.33	50	50	ENSMUST00000127533.8	ENSMUSG00000087174.8	5530601H04Rik	chrX	lncRNA	RIKEN cDNA 5530601H04 gene
chrX	104110483	104112177	-	104110483	104112070	A5SS	0.5	50	50	ENSMUST00000127533.8	ENSMUSG00000087174.8	5530601H04Rik	chrX	lncRNA	RIKEN cDNA 5530601H04 gene
chrX	104113281	104113671	-	104113281	104113606	A5SS	0.5	50	50	ENSMUST00000127533.8	ENSMUSG00000087174.8	5530601H04Rik	chrX	lncRNA	RIKEN cDNA 5530601H04 gene
chrX	104083418;104091616	104091515;104110365	-	104083418;104087717	104086731;104110365	MXE	0.5	100	100	ENSMUST00000156974.8	ENSMUSG00000087174.8	5530601H04Rik	chrX	lncRNA	RIKEN cDNA 5530601H04 gene
chrX	104087717;104091616	104091515;104110365	-	104087717	104110365	cassetteExon	0.5	100	100	ENSMUST00000156974.8	ENSMUSG00000087174.8	5530601H04Rik	chrX	lncRNA	RIKEN cDNA 5530601H04 gene
chrX	104106734	104110365	-	104087717	104110365	A3SS	0.33	50	50	ENSMUST00000156974.8	ENSMUSG00000087174.8	5530601H04Rik	chrX	lncRNA	RIKEN cDNA 5530601H04 gene
chrX	104083418	104086210	-	104083418	104086731	A5SS	0.33	50	50	ENSMUST00000156974.8	ENSMUSG00000087174.8	5530601H04Rik	chrX	lncRNA	RIKEN cDNA 5530601H04 gene
chrX	104087717	104112177	-	104087717	104110365	A5SS&ES	0.33	50	50	ENSMUST00000156974.8	ENSMUSG00000087174.8	5530601H04Rik	chrX	lncRNA	RIKEN cDNA 5530601H04 gene
chrX	104083418;104091616	104091515;104110365	-	104083418;104087717	104086210;104110365	MXE	0.5	100	100	ENSMUST00000154334.8	ENSMUSG00000087174.8	5530601H04Rik	chrX	lncRNA	RIKEN cDNA 5530601H04 gene
chrX	104087717	104112177	-	104087717	104091515	A5SS&ES	0.33	50	50	ENSMUST00000140954.8	ENSMUSG00000087174.8	5530601H04Rik	chrX	lncRNA	RIKEN cDNA 5530601H04 gene
chrX	104087717;104110483	104110365;104112177	-	104087717	104112177	cassetteExon	0.5	100	100	ENSMUST00000147478.8	ENSMUSG00000087174.8	5530601H04Rik	chrX	lncRNA	RIKEN cDNA 5530601H04 gene
chrX	104112234	104113217	-	104112752	104113217	3pMXE	0.5	50	50	ENSMUST00000144849.8	ENSMUSG00000087174.8	5530601H04Rik	chrX	lncRNA	RIKEN cDNA 5530601H04 gene
chrX	104118772	104119292	-	104113773	104119292	A3SS	0.33	50	50	ENSMUST00000144849.8	ENSMUSG00000087174.8	5530601H04Rik	chrX	lncRNA	RIKEN cDNA 5530601H04 gene
chrX	104118939	104119292	-	104113773	104119292	A3SS	0.33	50	50	ENSMUST00000144849.8	ENSMUSG00000087174.8	5530601H04Rik	chrX	lncRNA	RIKEN cDNA 5530601H04 gene
chrX	104121757	104122952	-	104121757	104122941	A5SS	0.5	50	50	ENSMUST00000144849.8	ENSMUSG00000087174.8	5530601H04Rik	chrX	lncRNA	RIKEN cDNA 5530601H04 gene
chrX	104118939	104119292	-	104118772	104119292	A3SS	0.33	50	50	ENSMUST00000144774.2	ENSMUSG00000087174.8	5530601H04Rik	chrX	lncRNA	RIKEN cDNA 5530601H04 gene
chrX	104126411	104159920	+	104126411	104126622	3pMXE	0.5	50	50	ENSMUST00000033577.11	ENSMUSG00000031226.14	Pbdc1	chrX	protein_coding	polysaccharide biosynthesis domain containing 1
chrX	104431542	104435082	-	104431542;104433549	104433476;104435082	ES	0.5	50	50	ENSMUST00000136406.8	ENSMUSG00000087620.8	5330434G04Rik	chrX	lncRNA	RIKEN cDNA 5330434G04 gene
chrX	104419443	104426359	-	104394805	104426359	A3SS	0.33	50	50	ENSMUST00000136406.8	ENSMUSG00000087620.8	5330434G04Rik	chrX	lncRNA	RIKEN cDNA 5330434G04 gene
chrX	104421726	104426359	-	104394805	104426359	A3SS	0.33	50	50	ENSMUST00000136406.8	ENSMUSG00000087620.8	5330434G04Rik	chrX	lncRNA	RIKEN cDNA 5330434G04 gene
chrX	104419443;104421726	104421622;104426359	-	104419443	104426359	cassetteExon	0.5	100	100	ENSMUST00000142109.8	ENSMUSG00000087620.8	5330434G04Rik	chrX	lncRNA	RIKEN cDNA 5330434G04 gene
chrX	104911529	104921973	-	104911529;104921179	104918166;104921973	ES	0.5	50	50	ENSMUST00000113573.8	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104923624	104931321	-	104923624;104928026	104927913;104931321	ES	0.33	50	50	ENSMUST00000113573.8	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104934578	104972706	-	104934578;104943599	104943487;104972706	ES	0.33	50	50	ENSMUST00000113573.8	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104867421;104869404	104869319;104869707	-	104867421	104869707	cassetteExon	0.5	100	100	ENSMUST00000113573.8	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104943599;104955260	104955076;104972706	-	104943599	104972706	cassetteExon	0.5	100	100	ENSMUST00000113573.8	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104876197	104879916	-	104876183	104879916	A3SS	0.5	50	50	ENSMUST00000113573.8	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104923621	104927913	-	104923624	104927913	A3SS	0.5	50	50	ENSMUST00000113573.8	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104923621	104931321	-	104928026	104931321	A3SS&ES	0.33	50	50	ENSMUST00000113573.8	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104869860	104873197	-	104869860	104874454	A5SS	0.5	50	50	ENSMUST00000113573.8	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104899637	104900088	-	104899637	104900064	A5SS	0.5	50	50	ENSMUST00000113573.8	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104934578	104972565	-	104934578	104943487	A5SS&ES	0.33	50	50	ENSMUST00000113573.8	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104943599	104954180	-	104943599	104972706	A5SS	0.2	50	50	ENSMUST00000113573.8	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104943599	104972094	-	104943599	104972706	A5SS	0.2	50	50	ENSMUST00000113573.8	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104943599	104972565	-	104943599	104972706	A5SS	0.2	50	50	ENSMUST00000113573.8	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104911529	104921973	-	104911529	104918166	5pMXE	0.5	50	50	ENSMUST00000123174.2	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104921179	104921973	-	104911529	104921973	A3SS	0.5	50	50	ENSMUST00000197302.5	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104923621;104928026	104927913;104931321	-	104923621	104931321	cassetteExon	0.5	100	100	ENSMUST00000128968.8	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104923624	104931321	-	104923621	104931321	A3SS	0.33	50	50	ENSMUST00000128968.8	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104955260	104972706	-	104934578	104972706	A3SS	0.33	50	50	ENSMUST00000198448.5	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104934578	104972565	-	104934578	104972706	A5SS	0.33	50	50	ENSMUST00000198448.5	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104943599	104972565	-	104943599;104955260	104955076;104972565	ES	0.33	50	50	ENSMUST00000134507.8	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104943599;104954249	104954180;104955076	-	104943599	104955076	cassetteExon	0.5	100	100	ENSMUST00000134507.8	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104934578	104972706	-	104934578	104943487	A5SS&ES	0.33	50	50	ENSMUST00000134507.8	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104943599	104972094	-	104943599	104955076	A5SS&ES	0.2	50	50	ENSMUST00000134507.8	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104943599	104972706	-	104943599	104955076	A5SS&ES	0.2	50	50	ENSMUST00000134507.8	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104955260	104972706	-	104955260	104972565	A5SS	0.5	50	50	ENSMUST00000134507.8	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104943599	104972094	-	104943599	104954180	A5SS&ES	0.2	50	50	ENSMUST00000150914.8	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104934578;104943599	104943487;104972565	-	104934578	104972565	cassetteExon	0.5	100	100	ENSMUST00000134381.8	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104955260	104972565	-	104934578	104972565	A3SS	0.33	50	50	ENSMUST00000134381.8	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104923624	104931321	-	104928026	104931321	A3SS&ES	0.33	50	50	ENSMUST00000154866.8	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104943599	104972565	-	104943599	104972094	5pMXE	0.2	50	50	ENSMUST00000101305.9	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104943599	104954180	-	104943599	104972565	A5SS	0.2	50	50	ENSMUST00000130980.2	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	104943599	104972565	-	104943599	104955076	A5SS&ES	0.2	50	50	ENSMUST00000126345.3	ENSMUSG00000031229.17	Atrx	chrX	protein_coding	ATRX, chromatin remodeler
chrX	105020365	105023012	-	105017881	105023012	A3SS	0.5	50	50	ENSMUST00000238718.2	ENSMUSG00000031232.18	Magt1	chrX	protein_coding	magnesium transporter 1
chrX	105059476	105059711	+	105059476	105063185	A3SS	0.5	50	50	ENSMUST00000033582.5	ENSMUSG00000031231.5	Cox7b	chrX	protein_coding	cytochrome c oxidase subunit 7B
chrX	105130420	105131941	+	105130420	105131944	A3SS	0.5	50	50	ENSMUST00000113557.8	ENSMUSG00000033792.13	Atp7a	chrX	protein_coding	ATPase, Cu++ transporting, alpha polypeptide
chrX	105150606	105150790	+	105148947	105150790	A5SS	0.5	50	50	ENSMUST00000113557.8	ENSMUSG00000033792.13	Atp7a	chrX	protein_coding	ATPase, Cu++ transporting, alpha polypeptide
chrX	105186927	105191052	+	105186927	105187010	3pMXE	0.5	50	50	ENSMUST00000139380.3	ENSMUSG00000033777.5	Tlr13	chrX	protein_coding	toll-like receptor 13
chrX	105243367	105243723	+	105243367	105243763	A3SS	0.5	50	50	ENSMUST00000081593.13	ENSMUSG00000062070.13	Pgk1	chrX	protein_coding	phosphoglycerate kinase 1
chrX	105263304	105263914	-	105263304	105264683	A5SS	0.5	50	50	ENSMUST00000113495.9	ENSMUSG00000047242.15	Taf9b	chrX	protein_coding	TATA-box binding protein associated factor 9B
chrX	105475042	105476364	-	105475042;105476152	105476039;105476364	ES	0.5	50	50	ENSMUST00000039447.14	ENSMUSG00000033737.15	Fndc3c1	chrX	protein_coding	fibronectin type III domain containing 3C1
chrX	105516787	105528551	-	105516787;105517553	105517437;105528551	ES	0.33	50	50	ENSMUST00000039447.14	ENSMUSG00000033737.15	Fndc3c1	chrX	protein_coding	fibronectin type III domain containing 3C1
chrX	105517519	105528551	-	105517553	105528551	A3SS	0.33	50	50	ENSMUST00000039447.14	ENSMUSG00000033737.15	Fndc3c1	chrX	protein_coding	fibronectin type III domain containing 3C1
chrX	105517553	105527181	-	105517553	105528551	A5SS	0.5	50	50	ENSMUST00000039447.14	ENSMUSG00000033737.15	Fndc3c1	chrX	protein_coding	fibronectin type III domain containing 3C1
chrX	105516787;105517519	105517437;105528551	-	105516787	105528551	cassetteExon	0.5	100	100	ENSMUST00000149331.2	ENSMUSG00000033737.15	Fndc3c1	chrX	protein_coding	fibronectin type III domain containing 3C1
chrX	105626852	105715106	+	105626852;105669175	105669092;105715106	ES	0.5	50	50	ENSMUST00000101296.9	ENSMUSG00000073010.10	Gm5127	chrX	protein_coding	predicted gene 5127
chrX	105718272	105747470	+	105718272	105752682	A3SS	0.5	50	50	ENSMUST00000101297.4	ENSMUSG00000073010.10	Gm5127	chrX	protein_coding	predicted gene 5127
chrX	105752439	105752682	+	105718272	105752682	A5SS	0.5	50	50	ENSMUST00000101297.4	ENSMUSG00000073010.10	Gm5127	chrX	protein_coding	predicted gene 5127
chrX	106133033;106133338	106133164;106146018	+	106133033	106146018	cassetteExon	0.5	100	100	ENSMUST00000150494.2	ENSMUSG00000050921.13	P2ry10	chrX	protein_coding	purinergic receptor P2Y, G-protein coupled 10
chrX	106193233	106214445	+	106192753	106214445	A5SS	0.25	50	50	ENSMUST00000147521.8	ENSMUSG00000054293.11	P2ry10b	chrX	protein_coding	purinergic receptor P2Y, G-protein coupled 10B
chrX	106193405	106214445	+	106192753	106214445	A5SS	0.25	50	50	ENSMUST00000147521.8	ENSMUSG00000054293.11	P2ry10b	chrX	protein_coding	purinergic receptor P2Y, G-protein coupled 10B
chrX	106196594	106214445	+	106192753	106214445	A5SS	0.25	50	50	ENSMUST00000147521.8	ENSMUSG00000054293.11	P2ry10b	chrX	protein_coding	purinergic receptor P2Y, G-protein coupled 10B
chrX	106193233;106196594	106196520;106214445	+	106193233	106214445	cassetteExon	0.5	100	100	ENSMUST00000125676.8	ENSMUSG00000054293.11	P2ry10b	chrX	protein_coding	purinergic receptor P2Y, G-protein coupled 10B
chrX	106193405	106214445	+	106193233	106214445	A5SS	0.25	50	50	ENSMUST00000125676.8	ENSMUSG00000054293.11	P2ry10b	chrX	protein_coding	purinergic receptor P2Y, G-protein coupled 10B
chrX	106193405	106214445	+	106196594	106214445	A5SS&ES	0.33	50	50	ENSMUST00000137107.2	ENSMUSG00000054293.11	P2ry10b	chrX	protein_coding	purinergic receptor P2Y, G-protein coupled 10B
chrX	106332142	106335629	+	106332142	106335665	A3SS	0.5	50	50	ENSMUST00000101294.9	ENSMUSG00000073008.12	Gpr174	chrX	protein_coding	G protein-coupled receptor 174
chrX	106299711	106300002	+	106299722	106300002	A5SS	0.5	50	50	ENSMUST00000101294.9	ENSMUSG00000073008.12	Gpr174	chrX	protein_coding	G protein-coupled receptor 174
chrX	106312569	106332072	+	106312573	106332072	A5SS	0.33	50	50	ENSMUST00000101294.9	ENSMUSG00000073008.12	Gpr174	chrX	protein_coding	G protein-coupled receptor 174
chrX	106328088	106332072	+	106312573	106332072	A5SS	0.33	50	50	ENSMUST00000101294.9	ENSMUSG00000073008.12	Gpr174	chrX	protein_coding	G protein-coupled receptor 174
chrX	106328088	106332072	+	106312569	106332072	A5SS	0.33	50	50	ENSMUST00000118820.8	ENSMUSG00000073008.12	Gpr174	chrX	protein_coding	G protein-coupled receptor 174
chrX	106720643;106721383	106721212;106722158	+	106720643	106722158	cassetteExon	0.5	100	100	ENSMUST00000172682.8	ENSMUSG00000031241.18	Tbx22	chrX	protein_coding	T-box 22
chrX	106720159	106720467	+	106711715	106720467	A5SS	0.5	50	50	ENSMUST00000172682.8	ENSMUSG00000031241.18	Tbx22	chrX	protein_coding	T-box 22
chrX	106722649	106723714	+	106722259	106723714	A5SS	0.33	50	50	ENSMUST00000172682.8	ENSMUSG00000031241.18	Tbx22	chrX	protein_coding	T-box 22
chrX	106722825	106723714	+	106722259	106723714	A5SS	0.33	50	50	ENSMUST00000172682.8	ENSMUSG00000031241.18	Tbx22	chrX	protein_coding	T-box 22
chrX	106723919	106724747	+	106723888	106724747	A5SS	0.5	50	50	ENSMUST00000172682.8	ENSMUSG00000031241.18	Tbx22	chrX	protein_coding	T-box 22
chrX	106722825	106723714	+	106722649	106723714	A5SS	0.33	50	50	ENSMUST00000068451.12	ENSMUSG00000031241.18	Tbx22	chrX	protein_coding	T-box 22
chrX	106863361	106906563	+	106863361;106867085	106867015;106906563	ES	0.5	50	50	ENSMUST00000101292.9	ENSMUSG00000073007.11	Tent5d	chrX	protein_coding	terminal nucleotidyltransferase 5D
chrX	106860247	106863292	+	106836256	106863292	A5SS	0.5	50	50	ENSMUST00000101292.9	ENSMUSG00000073007.11	Tent5d	chrX	protein_coding	terminal nucleotidyltransferase 5D
chrX	106990871	106991993	-	106990871	106991913	A5SS	0.5	50	50	ENSMUST00000101290.2	ENSMUSG00000073006.3	Wmp	chrX	protein_coding	WAVE homology in membrane protrusions
chrX	107841705	107847588	-	107841705;107842461	107842361;107847588	ES	0.5	50	50	ENSMUST00000150434.8	ENSMUSG00000063663.12	Brwd3	chrX	protein_coding	bromodomain and WD repeat domain containing 3
chrX	107868510	107876820	-	107868510;107869101	107868951;107876820	ES	0.33	50	50	ENSMUST00000150434.8	ENSMUSG00000063663.12	Brwd3	chrX	protein_coding	bromodomain and WD repeat domain containing 3
chrX	107864921	107868412	-	107849203	107868412	A3SS	0.5	50	50	ENSMUST00000150434.8	ENSMUSG00000063663.12	Brwd3	chrX	protein_coding	bromodomain and WD repeat domain containing 3
chrX	107849203	107876820	-	107849203;107868510	107868412;107876820	ES	0.33	50	50	ENSMUST00000041866.12	ENSMUSG00000063663.12	Brwd3	chrX	protein_coding	bromodomain and WD repeat domain containing 3
chrX	107869101	107876820	-	107849203	107876820	A3SS	0.33	50	50	ENSMUST00000144521.8	ENSMUSG00000063663.12	Brwd3	chrX	protein_coding	bromodomain and WD repeat domain containing 3
chrX	107945161	108015727	+	107945161	107969041	3pMXE	0.5	50	50	ENSMUST00000207966.2	ENSMUSG00000086629.9	2810403D21Rik	chrX	lncRNA	RIKEN cDNA 2810403D21 gene
chrX	107879961;107915204	107915078;107945070	+	107879961	107945070	cassetteExon	0.5	100	100	ENSMUST00000207966.2	ENSMUSG00000086629.9	2810403D21Rik	chrX	lncRNA	RIKEN cDNA 2810403D21 gene
chrX	107879961	107899486	+	107879961	107945070	A3SS	0.2	50	50	ENSMUST00000207966.2	ENSMUSG00000086629.9	2810403D21Rik	chrX	lncRNA	RIKEN cDNA 2810403D21 gene
chrX	107879961	107917874	+	107879961	107945070	A3SS	0.2	50	50	ENSMUST00000207966.2	ENSMUSG00000086629.9	2810403D21Rik	chrX	lncRNA	RIKEN cDNA 2810403D21 gene
chrX	107879961	107929951	+	107879961	107945070	A3SS	0.2	50	50	ENSMUST00000207966.2	ENSMUSG00000086629.9	2810403D21Rik	chrX	lncRNA	RIKEN cDNA 2810403D21 gene
chrX	107878291	107879872	+	107877561	107879872	A5SS	0.25	50	50	ENSMUST00000207966.2	ENSMUSG00000086629.9	2810403D21Rik	chrX	lncRNA	RIKEN cDNA 2810403D21 gene
chrX	107878379	107879872	+	107877561	107879872	A5SS	0.25	50	50	ENSMUST00000207966.2	ENSMUSG00000086629.9	2810403D21Rik	chrX	lncRNA	RIKEN cDNA 2810403D21 gene
chrX	107878610	107879872	+	107877561	107879872	A5SS	0.25	50	50	ENSMUST00000207966.2	ENSMUSG00000086629.9	2810403D21Rik	chrX	lncRNA	RIKEN cDNA 2810403D21 gene
chrX	107879961;107915204	107915078;107929951	+	107879961;107901978	107899486;107929951	MXE	0.5	100	100	ENSMUST00000153212.8	ENSMUSG00000086629.9	2810403D21Rik	chrX	lncRNA	RIKEN cDNA 2810403D21 gene
chrX	107879961	107917874	+	107879961	107899486	A3SS&ES	0.25	50	50	ENSMUST00000153212.8	ENSMUSG00000086629.9	2810403D21Rik	chrX	lncRNA	RIKEN cDNA 2810403D21 gene
chrX	107878379	107879872	+	107878291	107879872	A5SS	0.25	50	50	ENSMUST00000153212.8	ENSMUSG00000086629.9	2810403D21Rik	chrX	lncRNA	RIKEN cDNA 2810403D21 gene
chrX	107878610	107879872	+	107878291	107879872	A5SS	0.25	50	50	ENSMUST00000153212.8	ENSMUSG00000086629.9	2810403D21Rik	chrX	lncRNA	RIKEN cDNA 2810403D21 gene
chrX	107879961	107929951	+	107879961;107915204	107915078;107929951	ES	0.33	50	50	ENSMUST00000144421.8	ENSMUSG00000086629.9	2810403D21Rik	chrX	lncRNA	RIKEN cDNA 2810403D21 gene
chrX	107915204	107945070	+	107915204	107929951	3pMXE	0.33	50	50	ENSMUST00000144421.8	ENSMUSG00000086629.9	2810403D21Rik	chrX	lncRNA	RIKEN cDNA 2810403D21 gene
chrX	107879961	107899486	+	107879961	107915078	A3SS	0.25	50	50	ENSMUST00000144421.8	ENSMUSG00000086629.9	2810403D21Rik	chrX	lncRNA	RIKEN cDNA 2810403D21 gene
chrX	107879961	107917874	+	107879961	107915078	A3SS&ES	0.25	50	50	ENSMUST00000144421.8	ENSMUSG00000086629.9	2810403D21Rik	chrX	lncRNA	RIKEN cDNA 2810403D21 gene
chrX	107915204	107917874	+	107915204	107929951	A3SS	0.33	50	50	ENSMUST00000144421.8	ENSMUSG00000086629.9	2810403D21Rik	chrX	lncRNA	RIKEN cDNA 2810403D21 gene
chrX	107901978	107929951	+	107915204	107929951	A5SS&ES	0.33	50	50	ENSMUST00000144421.8	ENSMUSG00000086629.9	2810403D21Rik	chrX	lncRNA	RIKEN cDNA 2810403D21 gene
chrX	107879961	107929951	+	107879961	107915078	A3SS&ES	0.2	50	50	ENSMUST00000123040.8	ENSMUSG00000086629.9	2810403D21Rik	chrX	lncRNA	RIKEN cDNA 2810403D21 gene
chrX	107915204	107917874	+	107915204	107945070	A3SS	0.33	50	50	ENSMUST00000123040.8	ENSMUSG00000086629.9	2810403D21Rik	chrX	lncRNA	RIKEN cDNA 2810403D21 gene
chrX	107947959	108015727	+	107945161	108015727	A5SS	0.5	50	50	ENSMUST00000123040.8	ENSMUSG00000086629.9	2810403D21Rik	chrX	lncRNA	RIKEN cDNA 2810403D21 gene
chrX	107878379	107879835	+	107878379	107879872	A3SS	0.5	50	50	ENSMUST00000131640.8	ENSMUSG00000086629.9	2810403D21Rik	chrX	lncRNA	RIKEN cDNA 2810403D21 gene
chrX	107879961	107899486	+	107879961	107929951	A3SS	0.2	50	50	ENSMUST00000131640.8	ENSMUSG00000086629.9	2810403D21Rik	chrX	lncRNA	RIKEN cDNA 2810403D21 gene
chrX	107879961	107917874	+	107879961	107929951	A3SS	0.2	50	50	ENSMUST00000131640.8	ENSMUSG00000086629.9	2810403D21Rik	chrX	lncRNA	RIKEN cDNA 2810403D21 gene
chrX	107878610	107879872	+	107878379	107879872	A5SS	0.25	50	50	ENSMUST00000131640.8	ENSMUSG00000086629.9	2810403D21Rik	chrX	lncRNA	RIKEN cDNA 2810403D21 gene
chrX	107901978	107929951	+	107879961	107929951	A5SS	0.33	50	50	ENSMUST00000131640.8	ENSMUSG00000086629.9	2810403D21Rik	chrX	lncRNA	RIKEN cDNA 2810403D21 gene
chrX	107879961	107917874	+	107879961;107915204	107915078;107917874	ES	0.5	50	50	ENSMUST00000152089.2	ENSMUSG00000086629.9	2810403D21Rik	chrX	lncRNA	RIKEN cDNA 2810403D21 gene
chrX	108197992	108240317	+	108197992	108203736	3pMXE	0.5	50	50	ENSMUST00000033598.9	ENSMUSG00000031246.15	Sh3bgrl	chrX	protein_coding	SH3-binding domain glutamic acid-rich protein like
chrX	108173016	108193521	+	108139243	108193521	A5SS	0.5	50	50	ENSMUST00000033598.9	ENSMUSG00000031246.15	Sh3bgrl	chrX	protein_coding	SH3-binding domain glutamic acid-rich protein like
chrX	108240492	108241905	+	108240492	108241382	3pMXE	0.5	50	50	ENSMUST00000133614.8	ENSMUSG00000031246.15	Sh3bgrl	chrX	protein_coding	SH3-binding domain glutamic acid-rich protein like
chrX	110355987	110372547	-	110355987;110360051	110359989;110372547	ES	0.5	50	50	ENSMUST00000065976.12	ENSMUSG00000025665.17	Rps6ka6	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 6
chrX	110360051	110396366	-	110360051	110372547	5pMXE	0.33	50	50	ENSMUST00000065976.12	ENSMUSG00000025665.17	Rps6ka6	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 6
chrX	110299608;110300915	110300784;110308278	-	110299608	110308278	cassetteExon	0.5	100	100	ENSMUST00000065976.12	ENSMUSG00000025665.17	Rps6ka6	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 6
chrX	110309966	110314375	-	110309981	110314375	A3SS	0.5	50	50	ENSMUST00000065976.12	ENSMUSG00000025665.17	Rps6ka6	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 6
chrX	110360051	110372103	-	110360051	110372547	A5SS	0.33	50	50	ENSMUST00000065976.12	ENSMUSG00000025665.17	Rps6ka6	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 6
chrX	110360051	110396366	-	110360051;110372798	110372547;110396366	ES	0.33	50	50	ENSMUST00000082034.13	ENSMUSG00000025665.17	Rps6ka6	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 6
chrX	110372795	110396366	-	110372798	110396366	A3SS	0.33	50	50	ENSMUST00000082034.13	ENSMUSG00000025665.17	Rps6ka6	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 6
chrX	110372798	110372968	-	110372798	110396366	A5SS	0.5	50	50	ENSMUST00000082034.13	ENSMUSG00000025665.17	Rps6ka6	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 6
chrX	110355987;110372795	110372547;110396366	-	110355987;110360051	110359989;110396366	MXE	0.5	100	100	ENSMUST00000138645.8	ENSMUSG00000025665.17	Rps6ka6	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 6
chrX	110360051;110372795	110372547;110396366	-	110360051	110396366	cassetteExon	0.5	100	100	ENSMUST00000138645.8	ENSMUSG00000025665.17	Rps6ka6	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 6
chrX	110355987;110372798	110372547;110396366	-	110355987;110360051	110359989;110396366	MXE	0.5	100	100	ENSMUST00000138645.8	ENSMUSG00000025665.17	Rps6ka6	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 6
chrX	110360051	110372103	-	110360051	110396366	A5SS	0.33	50	50	ENSMUST00000138645.8	ENSMUSG00000025665.17	Rps6ka6	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 6
chrX	110396497	110445941	-	110396497	110440801	5pMXE	0.33	50	50	ENSMUST00000128819.8	ENSMUSG00000025665.17	Rps6ka6	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 6
chrX	110396497	110447518	-	110396497	110440801	5pMXE	0.33	50	50	ENSMUST00000128819.8	ENSMUSG00000025665.17	Rps6ka6	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 6
chrX	110396497	110445941	-	110396497	110447518	A5SS	0.33	50	50	ENSMUST00000132319.8	ENSMUSG00000025665.17	Rps6ka6	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 6
chrX	110355987	110372547	-	110360051	110372547	3pMXE	0.5	50	50	ENSMUST00000156639.2	ENSMUSG00000025665.17	Rps6ka6	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 6
chrX	110570440	110606664	-	110570440;110581186	110581040;110606664	ES	0.5	50	50	ENSMUST00000113422.9	ENSMUSG00000034551.13	Hdx	chrX	protein_coding	highly divergent homeobox
chrX	110854718	110873237	+	110854718	110920684	A3SS	0.5	50	50	ENSMUST00000207962.2	ENSMUSG00000109156.2	Gm45194	chrX	protein_coding	predicted gene 45194
chrX	110928164	110978112	+	110928164	111081205	A3SS	0.5	50	50	ENSMUST00000207962.2	ENSMUSG00000109156.2	Gm45194	chrX	protein_coding	predicted gene 45194
chrX	111148768	111150191	+	111133110	111150191	A5SS	0.5	50	50	ENSMUST00000207962.2	ENSMUSG00000109156.2	Gm45194	chrX	protein_coding	predicted gene 45194
chrX	111221133	111255935	+	111221133;111243602	111243498;111255935	ES	0.5	50	50	ENSMUST00000026599.10	ENSMUSG00000025525.13	Apool	chrX	protein_coding	apolipoprotein O-like
chrX	111263949	111274159	+	111263949;111273967	111273854;111274159	ES	0.5	50	50	ENSMUST00000026599.10	ENSMUSG00000025525.13	Apool	chrX	protein_coding	apolipoprotein O-like
chrX	111425009	111465947	+	111424979	111465947	A5SS	0.5	50	50	ENSMUST00000026602.9	ENSMUSG00000025528.11	2010106E10Rik	chrX	protein_coding	RIKEN cDNA 2010106E10 gene
chrX	111534573	111537801	+	111534573;111537001	111536867;111537801	ES	0.5	50	50	ENSMUST00000113409.8	ENSMUSG00000025529.15	Zfp711	chrX	protein_coding	zinc finger protein 711
chrX	112021746	112025713	-	112021746;112022362	112022246;112025713	ES	0.5	50	50	ENSMUST00000026607.15	ENSMUSG00000025531.15	Chm	chrX	protein_coding	choroidermia (RAB escort protein 1)
chrX	111974056	111974544	-	111962857	111974544	A3SS	0.5	50	50	ENSMUST00000026607.15	ENSMUSG00000025531.15	Chm	chrX	protein_coding	choroidermia (RAB escort protein 1)
chrX	112026123	112050411	-	112049157	112050411	A3SS&ES	0.5	50	50	ENSMUST00000026607.15	ENSMUSG00000025531.15	Chm	chrX	protein_coding	choroidermia (RAB escort protein 1)
chrX	112207774	112362155	+	112207774;112360363	112360282;112362155	ES	0.25	50	50	ENSMUST00000113380.8	ENSMUSG00000025592.18	Dach2	chrX	protein_coding	dachshund family transcription factor 2
chrX	112662600	112724540	+	112662600;112675572	112675483;112724540	ES	0.5	50	50	ENSMUST00000113380.8	ENSMUSG00000025592.18	Dach2	chrX	protein_coding	dachshund family transcription factor 2
chrX	112207774;112212162	112212081;112362155	+	112207774;112360363	112360282;112362155	MXE	0.5	100	100	ENSMUST00000113380.8	ENSMUSG00000025592.18	Dach2	chrX	protein_coding	dachshund family transcription factor 2
chrX	112729711	112740785	+	112729711	112745096	A3SS	0.5	50	50	ENSMUST00000113380.8	ENSMUSG00000025592.18	Dach2	chrX	protein_coding	dachshund family transcription factor 2
chrX	112208632	112362155	+	112360363	112362155	A5SS&ES	0.25	50	50	ENSMUST00000113380.8	ENSMUSG00000025592.18	Dach2	chrX	protein_coding	dachshund family transcription factor 2
chrX	112208632	112465945	+	112362193	112465945	A5SS&ES	0.33	50	50	ENSMUST00000113380.8	ENSMUSG00000025592.18	Dach2	chrX	protein_coding	dachshund family transcription factor 2
chrX	112223181	112465945	+	112362193	112465945	A5SS&ES	0.33	50	50	ENSMUST00000113380.8	ENSMUSG00000025592.18	Dach2	chrX	protein_coding	dachshund family transcription factor 2
chrX	112724688	112724814	+	112724718	112724814	A5SS	0.5	50	50	ENSMUST00000113380.8	ENSMUSG00000025592.18	Dach2	chrX	protein_coding	dachshund family transcription factor 2
chrX	112207774;112212162	112212081;112362155	+	112207774	112362155	cassetteExon	0.5	100	100	ENSMUST00000113379.8	ENSMUSG00000025592.18	Dach2	chrX	protein_coding	dachshund family transcription factor 2
chrX	112208632	112362155	+	112207774	112362155	A5SS	0.25	50	50	ENSMUST00000113379.8	ENSMUSG00000025592.18	Dach2	chrX	protein_coding	dachshund family transcription factor 2
chrX	112207774;112362193	112362155;112465945	+	112207774;112223181	112212081;112465945	MXE	0.5	100	100	ENSMUST00000113378.8	ENSMUSG00000025592.18	Dach2	chrX	protein_coding	dachshund family transcription factor 2
chrX	112212162;112362193	112362155;112465945	+	112212162;112223181	112223074;112465945	MXE	0.5	100	100	ENSMUST00000113378.8	ENSMUSG00000025592.18	Dach2	chrX	protein_coding	dachshund family transcription factor 2
chrX	112207774	112360282	+	112207774	112212081	A3SS&ES	0.33	50	50	ENSMUST00000113378.8	ENSMUSG00000025592.18	Dach2	chrX	protein_coding	dachshund family transcription factor 2
chrX	112208632	112212081	+	112207774	112212081	A5SS	0.5	50	50	ENSMUST00000113378.8	ENSMUSG00000025592.18	Dach2	chrX	protein_coding	dachshund family transcription factor 2
chrX	112208632	112465945	+	112223181	112465945	A5SS&ES	0.33	50	50	ENSMUST00000113378.8	ENSMUSG00000025592.18	Dach2	chrX	protein_coding	dachshund family transcription factor 2
chrX	112208632	112465945	+	112208632;112362193	112362155;112465945	ES	0.33	50	50	ENSMUST00000146539.8	ENSMUSG00000025592.18	Dach2	chrX	protein_coding	dachshund family transcription factor 2
chrX	112208632;112212162	112212081;112362155	+	112208632	112362155	cassetteExon	0.5	100	100	ENSMUST00000146539.8	ENSMUSG00000025592.18	Dach2	chrX	protein_coding	dachshund family transcription factor 2
chrX	112208632	112212081	+	112208632	112465945	A3SS	0.33	50	50	ENSMUST00000113382.8	ENSMUSG00000025592.18	Dach2	chrX	protein_coding	dachshund family transcription factor 2
chrX	112360363	112362155	+	112212162	112362155	A5SS	0.33	50	50	ENSMUST00000141552.2	ENSMUSG00000025592.18	Dach2	chrX	protein_coding	dachshund family transcription factor 2
chrX	113439851	113452699	+	113439932	113452699	A5SS	0.5	50	50	ENSMUST00000113371.8	ENSMUSG00000025597.14	Klhl4	chrX	protein_coding	kelch-like 4
chrX	113452885	113459050	+	113452867	113459050	A5SS	0.5	50	50	ENSMUST00000113371.8	ENSMUSG00000025597.14	Klhl4	chrX	protein_coding	kelch-like 4
chrX	118836997	118837540	+	118836997	118837534	A3SS	0.5	50	50	ENSMUST00000040961.3	ENSMUSG00000034732.5	Pabpc5	chrX	protein_coding	poly(A) binding protein, cytoplasmic 5
chrX	119504482	119636198	+	119504482;119547321	119547292;119636198	ES	0.33	50	50	ENSMUST00000113364.10	ENSMUSG00000034755.19	Pcdh11x	chrX	protein_coding	protocadherin 11 X-linked
chrX	119636396	119815395	+	119636396;119720860	119720837;119815395	ES	0.33	50	50	ENSMUST00000113364.10	ENSMUSG00000034755.19	Pcdh11x	chrX	protein_coding	protocadherin 11 X-linked
chrX	119636396;119809397	119809252;119815395	+	119636396;119720860	119720837;119815395	MXE	0.5	100	100	ENSMUST00000113364.10	ENSMUSG00000034755.19	Pcdh11x	chrX	protein_coding	protocadherin 11 X-linked
chrX	119311594	119318084	+	119311594	119504402	A3SS	0.5	50	50	ENSMUST00000113364.10	ENSMUSG00000034755.19	Pcdh11x	chrX	protein_coding	protocadherin 11 X-linked
chrX	119636396	119785727	+	119636396	119720837	A3SS&ES	0.25	50	50	ENSMUST00000113364.10	ENSMUSG00000034755.19	Pcdh11x	chrX	protein_coding	protocadherin 11 X-linked
chrX	119528756	119636198	+	119547321	119636198	A5SS&ES	0.33	50	50	ENSMUST00000113364.10	ENSMUSG00000034755.19	Pcdh11x	chrX	protein_coding	protocadherin 11 X-linked
chrX	119636396	119809252	+	119636396	119785727	A3SS&ES	0.25	50	50	ENSMUST00000050239.16	ENSMUSG00000034755.19	Pcdh11x	chrX	protein_coding	protocadherin 11 X-linked
chrX	119636396	119815395	+	119636396	119785727	A3SS&ES	0.25	50	50	ENSMUST00000050239.16	ENSMUSG00000034755.19	Pcdh11x	chrX	protein_coding	protocadherin 11 X-linked
chrX	119504482	119636198	+	119528756	119636198	A5SS&ES	0.33	50	50	ENSMUST00000050239.16	ENSMUSG00000034755.19	Pcdh11x	chrX	protein_coding	protocadherin 11 X-linked
chrX	119636396;119809397	119809252;119815395	+	119636396	119815395	cassetteExon	0.5	100	100	ENSMUST00000113358.10	ENSMUSG00000034755.19	Pcdh11x	chrX	protein_coding	protocadherin 11 X-linked
chrX	122013334	122052307	+	122013334;122027266	122027151;122052307	ES	0.33	50	50	ENSMUST00000113343.8	ENSMUSG00000079450.12	Cldn34c1	chrX	protein_coding	claudin 34C1
chrX	122027266	122055793	+	122027266	122052307	3pMXE	0.25	50	50	ENSMUST00000113343.8	ENSMUSG00000079450.12	Cldn34c1	chrX	protein_coding	claudin 34C1
chrX	122027266	122096462	+	122027266	122052307	3pMXE	0.25	50	50	ENSMUST00000113343.8	ENSMUSG00000079450.12	Cldn34c1	chrX	protein_coding	claudin 34C1
chrX	122027266;122032635	122032595;122052307	+	122027266	122052307	cassetteExon	0.5	100	100	ENSMUST00000113343.8	ENSMUSG00000079450.12	Cldn34c1	chrX	protein_coding	claudin 34C1
chrX	122027266	122096462	+	122027266	122055793	3pMXE	0.25	50	50	ENSMUST00000153946.8	ENSMUSG00000079450.12	Cldn34c1	chrX	protein_coding	claudin 34C1
chrX	122013334	122052307	+	122013334	122027151	A3SS&ES	0.5	50	50	ENSMUST00000153946.8	ENSMUSG00000079450.12	Cldn34c1	chrX	protein_coding	claudin 34C1
chrX	122027266	122032595	+	122027266	122055793	A3SS	0.25	50	50	ENSMUST00000153946.8	ENSMUSG00000079450.12	Cldn34c1	chrX	protein_coding	claudin 34C1
chrX	122027266	122032595	+	122027266	122096462	A3SS	0.25	50	50	ENSMUST00000149445.2	ENSMUSG00000079450.12	Cldn34c1	chrX	protein_coding	claudin 34C1
chrX	122032635	122052307	+	122013334	122052307	A5SS	0.33	50	50	ENSMUST00000139733.2	ENSMUSG00000079450.12	Cldn34c1	chrX	protein_coding	claudin 34C1
chrX	123042669	123045326	-	123042669;123043426	123043144;123045326	ES	0.33	50	50	ENSMUST00000094491.5	ENSMUSG00000072049.7	Vmn2r121	chrX	protein_coding	vomeronasal 2, receptor 121
chrX	123043426;123044290	123044135;123045326	-	123043426	123045326	cassetteExon	0.5	100	100	ENSMUST00000094491.5	ENSMUSG00000072049.7	Vmn2r121	chrX	protein_coding	vomeronasal 2, receptor 121
chrX	123044290	123045326	-	123042669	123045326	A3SS	0.33	50	50	ENSMUST00000233359.2	ENSMUSG00000072049.7	Vmn2r121	chrX	protein_coding	vomeronasal 2, receptor 121
chrX	128722092	128803649	+	128722092;128726696	128726676;128803649	ES	0.5	50	50	ENSMUST00000127577.8	ENSMUSG00000034480.19	Diaph2	chrX	protein_coding	diaphanous related formin 2
chrX	128650865;128702176	128702144;128704762	+	128650865	128704762	cassetteExon	0.5	100	100	ENSMUST00000127577.8	ENSMUSG00000034480.19	Diaph2	chrX	protein_coding	diaphanous related formin 2
chrX	128873358	128942397	+	128873358	128948074	A3SS	0.5	50	50	ENSMUST00000127577.8	ENSMUSG00000034480.19	Diaph2	chrX	protein_coding	diaphanous related formin 2
chrX	128650865	128702144	+	128650865	129190603	A3SS	0.33	50	50	ENSMUST00000155333.2	ENSMUSG00000034480.19	Diaph2	chrX	protein_coding	diaphanous related formin 2
chrX	128650865	128704762	+	128650865	129190603	A3SS	0.33	50	50	ENSMUST00000155333.2	ENSMUSG00000034480.19	Diaph2	chrX	protein_coding	diaphanous related formin 2
chrX	129159990	129190603	+	128650865	129190603	A5SS	0.5	50	50	ENSMUST00000155333.2	ENSMUSG00000034480.19	Diaph2	chrX	protein_coding	diaphanous related formin 2
chrX	132582157	132585867	-	132582157;132582981	132582841;132585867	ES	0.5	50	50	ENSMUST00000149154.8	ENSMUSG00000051323.17	Pcdh19	chrX	protein_coding	protocadherin 19
chrX	132526187	132533644	-	132526190	132533644	A3SS	0.5	50	50	ENSMUST00000149154.8	ENSMUSG00000051323.17	Pcdh19	chrX	protein_coding	protocadherin 19
chrX	132582981	132585566	-	132582981	132585867	A5SS	0.5	50	50	ENSMUST00000149154.8	ENSMUSG00000051323.17	Pcdh19	chrX	protein_coding	protocadherin 19
chrX	132795331	132796184	-	132795331;132795811	132795677;132796184	ES	0.5	50	50	ENSMUST00000087557.12	ENSMUSG00000067377.13	Tspan6	chrX	protein_coding	tetraspanin 6
chrX	132797506	132798020	-	132797506	132797873	A5SS	0.5	50	50	ENSMUST00000087557.12	ENSMUSG00000067377.13	Tspan6	chrX	protein_coding	tetraspanin 6
chrX	132798061	132798568	-	132798061	132798957	A5SS	0.5	50	50	ENSMUST00000087557.12	ENSMUSG00000067377.13	Tspan6	chrX	protein_coding	tetraspanin 6
chrX	132809527	132811266	+	132809527;132809753	132809702;132811266	ES	0.5	50	50	ENSMUST00000033606.15	ENSMUSG00000031253.16	Srpx2	chrX	protein_coding	sushi-repeat-containing protein, X-linked 2
chrX	132844417	132848486	-	132838799	132848486	A3SS	0.5	50	50	ENSMUST00000113297.9	ENSMUSG00000031255.15	Sytl4	chrX	protein_coding	synaptotagmin-like 4
chrX	132863019	132882411	-	132863046	132882411	A3SS	0.5	50	50	ENSMUST00000113297.9	ENSMUSG00000031255.15	Sytl4	chrX	protein_coding	synaptotagmin-like 4
chrX	132838799	132841072	-	132838799	132848486	A5SS	0.5	50	50	ENSMUST00000113297.9	ENSMUSG00000031255.15	Sytl4	chrX	protein_coding	synaptotagmin-like 4
chrX	132861521	132861657	-	132861521	132861758	A5SS	0.5	50	50	ENSMUST00000113297.9	ENSMUSG00000031255.15	Sytl4	chrX	protein_coding	synaptotagmin-like 4
chrX	132960171	132961694	+	132960171;132961471	132961393;132961694	ES	0.5	50	50	ENSMUST00000113287.8	ENSMUSG00000031256.12	Cstf2	chrX	protein_coding	cleavage stimulation factor, 3' pre-RNA subunit 2
chrX	132970656;132973513	132973164;132973963	+	132970656	132973963	cassetteExon	0.5	100	100	ENSMUST00000113287.8	ENSMUSG00000031256.12	Cstf2	chrX	protein_coding	cleavage stimulation factor, 3' pre-RNA subunit 2
chrX	132970656	132973885	+	132970656	132973963	A3SS	0.33	50	50	ENSMUST00000113287.8	ENSMUSG00000031256.12	Cstf2	chrX	protein_coding	cleavage stimulation factor, 3' pre-RNA subunit 2
chrX	132970656;132973223	132973164;132973885	+	132970656	132973885	cassetteExon	0.5	100	100	ENSMUST00000033609.9	ENSMUSG00000031256.12	Cstf2	chrX	protein_coding	cleavage stimulation factor, 3' pre-RNA subunit 2
chrX	132970656	132973885	+	132970656	132973164	A3SS&ES	0.33	50	50	ENSMUST00000156778.8	ENSMUSG00000031256.12	Cstf2	chrX	protein_coding	cleavage stimulation factor, 3' pre-RNA subunit 2
chrX	132973223	132973885	+	132973223	132973427	A3SS&ES	0.5	50	50	ENSMUST00000156778.8	ENSMUSG00000031256.12	Cstf2	chrX	protein_coding	cleavage stimulation factor, 3' pre-RNA subunit 2
chrX	132970656	132973963	+	132970656	132973164	A3SS&ES	0.33	50	50	ENSMUST00000136510.3	ENSMUSG00000031256.12	Cstf2	chrX	protein_coding	cleavage stimulation factor, 3' pre-RNA subunit 2
chrX	132993564	132995503	-	132993564;132993898	132993752;132995503	ES	0.5	50	50	ENSMUST00000033610.13	ENSMUSG00000031257.15	Nox1	chrX	protein_coding	NADPH oxidase 1
chrX	133000371	133008482	-	133000371;133000695	133000585;133008482	ES	0.5	50	50	ENSMUST00000033610.13	ENSMUSG00000031257.15	Nox1	chrX	protein_coding	NADPH oxidase 1
chrX	133015477	133043600	-	133015477	133038216	5pMXE	0.5	50	50	ENSMUST00000159231.3	ENSMUSG00000031257.15	Nox1	chrX	protein_coding	NADPH oxidase 1
chrX	133052045	133062325	-	133052045;133058230	133057962;133062325	ES	0.5	50	50	ENSMUST00000033611.5	ENSMUSG00000031258.5	Xkrx	chrX	protein_coding	X-linked Kx blood group related, X-linked
chrX	133163633	133167010	-	133163633;133164610	133164476;133167010	ES	0.5	50	50	ENSMUST00000128115.8	ENSMUSG00000067369.13	Trmt2b	chrX	protein_coding	TRM2 tRNA methyltransferase 2B
chrX	133168310;133171334	133171259;133177595	-	133168310	133177595	cassetteExon	0.5	100	100	ENSMUST00000128115.8	ENSMUSG00000067369.13	Trmt2b	chrX	protein_coding	TRM2 tRNA methyltransferase 2B
chrX	133208977	133209476	+	133208977;133209382	133209315;133209476	ES	0.5	50	50	ENSMUST00000081064.12	ENSMUSG00000031262.13	Cenpi	chrX	protein_coding	centromere protein I
chrX	133209046	133209315	+	133208977	133209315	A5SS	0.5	50	50	ENSMUST00000081064.12	ENSMUSG00000031262.13	Cenpi	chrX	protein_coding	centromere protein I
chrX	133208977	133209476	+	133209382	133209476	A5SS&ES	0.5	50	50	ENSMUST00000129782.2	ENSMUSG00000031262.13	Cenpi	chrX	protein_coding	centromere protein I
chrX	133305703;133310206	133310103;133324525	+	133305703	133324525	cassetteExon	0.5	100	100	ENSMUST00000113228.8	ENSMUSG00000000223.14	Drp2	chrX	protein_coding	dystrophin related protein 2
chrX	133324702;133327926	133327806;133329063	+	133324702	133329063	cassetteExon	0.5	100	100	ENSMUST00000113228.8	ENSMUSG00000000223.14	Drp2	chrX	protein_coding	dystrophin related protein 2
chrX	133370920	133371237	-	133370920	133371129	A5SS	0.5	50	50	ENSMUST00000009740.9	ENSMUSG00000009596.10	Taf7l	chrX	protein_coding	TATA-box binding protein associated factor 7 like
chrX	133373716	133375673	-	133373716	133376940	A5SS	0.5	50	50	ENSMUST00000009740.9	ENSMUSG00000009596.10	Taf7l	chrX	protein_coding	TATA-box binding protein associated factor 7 like
chrX	133474836	133484202	-	133474836	133483760	5pMXE	0.25	50	50	ENSMUST00000033617.13	ENSMUSG00000031264.14	Btk	chrX	protein_coding	Bruton agammaglobulinemia tyrosine kinase
chrX	133474836;133478373	133478219;133483760	-	133474836	133483760	cassetteExon	0.5	100	100	ENSMUST00000033617.13	ENSMUSG00000031264.14	Btk	chrX	protein_coding	Bruton agammaglobulinemia tyrosine kinase
chrX	133448375	133455212	-	133448375	133450164	A5SS&ES	0.5	50	50	ENSMUST00000033617.13	ENSMUSG00000031264.14	Btk	chrX	protein_coding	Bruton agammaglobulinemia tyrosine kinase
chrX	133474836	133483081	-	133474836	133483760	A5SS	0.25	50	50	ENSMUST00000033617.13	ENSMUSG00000031264.14	Btk	chrX	protein_coding	Bruton agammaglobulinemia tyrosine kinase
chrX	133474836	133483081	-	133474836	133478219	A5SS&ES	0.33	50	50	ENSMUST00000113213.2	ENSMUSG00000031264.14	Btk	chrX	protein_coding	Bruton agammaglobulinemia tyrosine kinase
chrX	133474836	133484202	-	133474836	133483081	5pMXE	0.25	50	50	ENSMUST00000150245.8	ENSMUSG00000031264.14	Btk	chrX	protein_coding	Bruton agammaglobulinemia tyrosine kinase
chrX	133474836	133478219	-	133474836	133484202	A5SS	0.25	50	50	ENSMUST00000128333.2	ENSMUSG00000031264.14	Btk	chrX	protein_coding	Bruton agammaglobulinemia tyrosine kinase
chrX	133486932	133487261	+	133486932	133487260	A3SS	0.5	50	50	ENSMUST00000113211.8	ENSMUSG00000079435.10	Rpl36a	chrX	protein_coding	ribosomal protein L36A
chrX	133497198	133500957	-	133497198	133501487	A5SS	0.5	50	50	ENSMUST00000033621.8	ENSMUSG00000031266.8	Gla	chrX	protein_coding	galactosidase, alpha
chrX	133502082	133505604	+	133502082;133503511	133503441;133505604	ES	0.33	50	50	ENSMUST00000074950.11	ENSMUSG00000045427.14	Hnrnph2	chrX	protein_coding	heterogeneous nuclear ribonucleoprotein H2
chrX	133503511;133503711	133503667;133505604	+	133503511	133505604	cassetteExon	0.5	100	100	ENSMUST00000074950.11	ENSMUSG00000045427.14	Hnrnph2	chrX	protein_coding	heterogeneous nuclear ribonucleoprotein H2
chrX	133502082	133503449	+	133502082	133503441	A3SS	0.33	50	50	ENSMUST00000074950.11	ENSMUSG00000045427.14	Hnrnph2	chrX	protein_coding	heterogeneous nuclear ribonucleoprotein H2
chrX	133502082;133503711	133503441;133505604	+	133502082	133505604	cassetteExon	0.5	100	100	ENSMUST00000113203.2	ENSMUSG00000045427.14	Hnrnph2	chrX	protein_coding	heterogeneous nuclear ribonucleoprotein H2
chrX	133502082;133503511	133503449;133505604	+	133502082	133505604	cassetteExon	0.5	100	100	ENSMUST00000113203.2	ENSMUSG00000045427.14	Hnrnph2	chrX	protein_coding	heterogeneous nuclear ribonucleoprotein H2
chrX	133502082;133503711	133503449;133505604	+	133502082	133505604	cassetteExon	0.5	100	100	ENSMUST00000113203.2	ENSMUSG00000045427.14	Hnrnph2	chrX	protein_coding	heterogeneous nuclear ribonucleoprotein H2
chrX	133502082	133505604	+	133502082	133503441	A3SS&ES	0.33	50	50	ENSMUST00000113202.8	ENSMUSG00000045427.14	Hnrnph2	chrX	protein_coding	heterogeneous nuclear ribonucleoprotein H2
chrX	133503511	133505604	+	133503511	133503667	A3SS	0.5	50	50	ENSMUST00000113202.8	ENSMUSG00000045427.14	Hnrnph2	chrX	protein_coding	heterogeneous nuclear ribonucleoprotein H2
chrX	133618799	133619669	+	133618799;133619567	133619475;133619669	ES	0.33	50	50	ENSMUST00000113201.8	ENSMUSG00000033460.15	Armcx1	chrX	protein_coding	armadillo repeat containing, X-linked 1
chrX	133618799;133619210	133619119;133619475	+	133618799	133619475	cassetteExon	0.5	100	100	ENSMUST00000113201.8	ENSMUSG00000033460.15	Armcx1	chrX	protein_coding	armadillo repeat containing, X-linked 1
chrX	133618799;133619210	133619119;133619669	+	133618799;133619567	133619475;133619669	MXE	0.5	100	100	ENSMUST00000113201.8	ENSMUSG00000033460.15	Armcx1	chrX	protein_coding	armadillo repeat containing, X-linked 1
chrX	133618799	133619405	+	133618799	133619475	A3SS	0.25	50	50	ENSMUST00000113201.8	ENSMUSG00000033460.15	Armcx1	chrX	protein_coding	armadillo repeat containing, X-linked 1
chrX	133619741	133620144	+	133619741	133620376	A3SS	0.5	50	50	ENSMUST00000113201.8	ENSMUSG00000033460.15	Armcx1	chrX	protein_coding	armadillo repeat containing, X-linked 1
chrX	133619857	133620376	+	133619741	133620376	A5SS	0.5	50	50	ENSMUST00000113201.8	ENSMUSG00000033460.15	Armcx1	chrX	protein_coding	armadillo repeat containing, X-linked 1
chrX	133618799;133619210	133619119;133619669	+	133618799	133619669	cassetteExon	0.5	100	100	ENSMUST00000051256.10	ENSMUSG00000033460.15	Armcx1	chrX	protein_coding	armadillo repeat containing, X-linked 1
chrX	133618799;133619567	133619119;133619669	+	133618799	133619669	cassetteExon	0.5	100	100	ENSMUST00000051256.10	ENSMUSG00000033460.15	Armcx1	chrX	protein_coding	armadillo repeat containing, X-linked 1
chrX	133618799;133619567	133619405;133619669	+	133618799	133619669	cassetteExon	0.5	100	100	ENSMUST00000051256.10	ENSMUSG00000033460.15	Armcx1	chrX	protein_coding	armadillo repeat containing, X-linked 1
chrX	133618799	133619405	+	133618799	133619119	A3SS	0.25	50	50	ENSMUST00000129697.2	ENSMUSG00000033460.15	Armcx1	chrX	protein_coding	armadillo repeat containing, X-linked 1
chrX	133618799	133619475	+	133618799	133619119	A3SS	0.25	50	50	ENSMUST00000129697.2	ENSMUSG00000033460.15	Armcx1	chrX	protein_coding	armadillo repeat containing, X-linked 1
chrX	133619210	133619669	+	133619567	133619669	A5SS	0.33	50	50	ENSMUST00000129697.2	ENSMUSG00000033460.15	Armcx1	chrX	protein_coding	armadillo repeat containing, X-linked 1
chrX	133619210	133619669	+	133619210;133619567	133619475;133619669	ES	0.33	50	50	ENSMUST00000113199.8	ENSMUSG00000033460.15	Armcx1	chrX	protein_coding	armadillo repeat containing, X-linked 1
chrX	133618799;133619210	133619119;133619669	+	133618799;133619567	133619405;133619669	MXE	0.5	100	100	ENSMUST00000125684.8	ENSMUSG00000033460.15	Armcx1	chrX	protein_coding	armadillo repeat containing, X-linked 1
chrX	133650974	133651136	-	133650974	133651300	A5SS	0.5	50	50	ENSMUST00000113194.8	ENSMUSG00000050394.15	Armcx6	chrX	protein_coding	armadillo repeat containing, X-linked 6
chrX	133651782	133652079	-	133651782	133651899	A5SS	0.5	50	50	ENSMUST00000113194.8	ENSMUSG00000050394.15	Armcx6	chrX	protein_coding	armadillo repeat containing, X-linked 6
chrX	133657479	133657985	+	133657479	133658013	A3SS	0.5	50	50	ENSMUST00000081834.10	ENSMUSG00000049047.12	Armcx3	chrX	protein_coding	armadillo repeat containing, X-linked 3
chrX	133657634	133657985	+	133657479	133657985	A5SS	0.5	50	50	ENSMUST00000086880.11	ENSMUSG00000049047.12	Armcx3	chrX	protein_coding	armadillo repeat containing, X-linked 3
chrX	133708076	133708370	-	133708076	133708203	5pMXE	0.5	50	50	ENSMUST00000119010.8	ENSMUSG00000033436.14	Armcx2	chrX	protein_coding	armadillo repeat containing, X-linked 2
chrX	133708076	133708370	-	133708076;133708262	133708203;133708370	ES	0.5	50	50	ENSMUST00000035559.11	ENSMUSG00000033436.14	Armcx2	chrX	protein_coding	armadillo repeat containing, X-linked 2
chrX	133709248	133709668	-	133709191	133709668	A3SS	0.5	50	50	ENSMUST00000035559.11	ENSMUSG00000033436.14	Armcx2	chrX	protein_coding	armadillo repeat containing, X-linked 2
chrX	133850633	133851096	-	133850615	133851096	A3SS	0.5	50	50	ENSMUST00000143059.2	ENSMUSG00000009941.11	Nxf2	chrX	protein_coding	nuclear RNA export factor 2
chrX	133862767	133865377	-	133862767	133864578	5pMXE	0.5	50	50	ENSMUST00000113187.8	ENSMUSG00000009941.11	Nxf2	chrX	protein_coding	nuclear RNA export factor 2
chrX	133893058;133893247	133893146;133894288	-	133893058	133894288	cassetteExon	0.5	100	100	ENSMUST00000113185.9	ENSMUSG00000052676.17	Zmat1	chrX	protein_coding	zinc finger, matrin type 1
chrX	133930793	133960664	-	133930793	133936763	5pMXE	0.5	50	50	ENSMUST00000153610.8	ENSMUSG00000089759.8	3632454L22Rik	chrX	lncRNA	RIKEN cDNA 3632454L22 gene
chrX	133926182	133930618	-	133926043	133930618	A3SS	0.33	50	50	ENSMUST00000153610.8	ENSMUSG00000089759.8	3632454L22Rik	chrX	lncRNA	RIKEN cDNA 3632454L22 gene
chrX	133929781	133930618	-	133926043	133930618	A3SS	0.33	50	50	ENSMUST00000153610.8	ENSMUSG00000089759.8	3632454L22Rik	chrX	lncRNA	RIKEN cDNA 3632454L22 gene
chrX	133929781	133930618	-	133926182	133930618	A3SS	0.33	50	50	ENSMUST00000142907.8	ENSMUSG00000089759.8	3632454L22Rik	chrX	lncRNA	RIKEN cDNA 3632454L22 gene
chrX	134274476	134278676	+	134274484	134278676	A5SS	0.5	50	50	ENSMUST00000113173.8	ENSMUSG00000094004.8	Gm5128	chrX	protein_coding	predicted gene 5128
chrX	134335035	134339280	+	134335027	134339280	A5SS	0.5	50	50	ENSMUST00000179953.2	ENSMUSG00000096508.8	Gm7903	chrX	protein_coding	predicted gene 7903
chrX	134488095;134488374	134488267;134488482	-	134488095	134488482	cassetteExon	0.5	100	100	ENSMUST00000137977.8	ENSMUSG00000031410.15	Nxf7	chrX	protein_coding	nuclear RNA export factor 7
chrX	134490219	134494562	-	134490219;134493044	134493015;134494562	ES	0.5	50	50	ENSMUST00000113163.8	ENSMUSG00000031410.15	Nxf7	chrX	protein_coding	nuclear RNA export factor 7
chrX	134494642	134497311	-	134494642	134499427	A5SS	0.5	50	50	ENSMUST00000113163.8	ENSMUSG00000031410.15	Nxf7	chrX	protein_coding	nuclear RNA export factor 7
chrX	134643727	134645248	+	134643727;134644363	134644312;134645248	ES	0.33	50	50	ENSMUST00000096321.3	ENSMUSG00000072969.3	Armcx5	chrX	protein_coding	armadillo repeat containing, X-linked 5
chrX	134645324	134649405	+	134645324	134645668	3pMXE	0.5	50	50	ENSMUST00000096321.3	ENSMUSG00000072969.3	Armcx5	chrX	protein_coding	armadillo repeat containing, X-linked 5
chrX	134643727;134644271	134644191;134645248	+	134643727;134644363	134644312;134645248	MXE	0.5	100	100	ENSMUST00000096321.3	ENSMUSG00000072969.3	Armcx5	chrX	protein_coding	armadillo repeat containing, X-linked 5
chrX	134652766	134696891	+	134652766	134662478	3pMXE	0.33	50	50	ENSMUST00000149595.8	ENSMUSG00000043384.16	Gprasp1	chrX	protein_coding	G protein-coupled receptor associated sorting protein 1
chrX	134652766	134698302	+	134652766	134662478	3pMXE	0.33	50	50	ENSMUST00000149595.8	ENSMUSG00000043384.16	Gprasp1	chrX	protein_coding	G protein-coupled receptor associated sorting protein 1
chrX	134643727;134644271	134644191;134645248	+	134643727	134645248	cassetteExon	0.5	100	100	ENSMUST00000113144.8	ENSMUSG00000043384.16	Gprasp1	chrX	protein_coding	G protein-coupled receptor associated sorting protein 1
chrX	134643727;134644363	134644191;134645248	+	134643727	134645248	cassetteExon	0.5	100	100	ENSMUST00000113144.8	ENSMUSG00000043384.16	Gprasp1	chrX	protein_coding	G protein-coupled receptor associated sorting protein 1
chrX	134652766	134696891	+	134652766	134698302	A3SS	0.33	50	50	ENSMUST00000113147.8	ENSMUSG00000043384.16	Gprasp1	chrX	protein_coding	G protein-coupled receptor associated sorting protein 1
chrX	134697786	134698302	+	134652766	134698302	A5SS	0.5	50	50	ENSMUST00000113147.8	ENSMUSG00000043384.16	Gprasp1	chrX	protein_coding	G protein-coupled receptor associated sorting protein 1
chrX	134741439	134741970	+	134741439;134741673	134741602;134741970	ES	0.5	50	50	ENSMUST00000207433.2	ENSMUSG00000072964.15	Bhlhb9	chrX	protein_coding	basic helix-loop-helix domain containing, class B9
chrX	134698378	134698537	+	134698378	134741368	A3SS	0.5	50	50	ENSMUST00000207433.2	ENSMUSG00000072964.15	Bhlhb9	chrX	protein_coding	basic helix-loop-helix domain containing, class B9
chrX	134741218	134741368	+	134698378	134741368	A5SS	0.33	50	50	ENSMUST00000207433.2	ENSMUSG00000072964.15	Bhlhb9	chrX	protein_coding	basic helix-loop-helix domain containing, class B9
chrX	134741257	134741368	+	134698378	134741368	A5SS	0.33	50	50	ENSMUST00000207433.2	ENSMUSG00000072964.15	Bhlhb9	chrX	protein_coding	basic helix-loop-helix domain containing, class B9
chrX	134786846	134787594	+	134786836	134787594	A5SS	0.5	50	50	ENSMUST00000180025.8	ENSMUSG00000072964.15	Bhlhb9	chrX	protein_coding	basic helix-loop-helix domain containing, class B9
chrX	134740011	134741142	+	134740011;134740621	134740494;134741142	ES	0.5	50	50	ENSMUST00000134986.8	ENSMUSG00000072966.12	Gprasp2	chrX	protein_coding	G protein-coupled receptor associated sorting protein 2
chrX	134740011	134740746	+	134740011	134740494	A3SS&ES	0.33	50	50	ENSMUST00000134986.8	ENSMUSG00000072966.12	Gprasp2	chrX	protein_coding	G protein-coupled receptor associated sorting protein 2
chrX	134740621	134740746	+	134740621	134741142	A3SS	0.5	50	50	ENSMUST00000134986.8	ENSMUSG00000072966.12	Gprasp2	chrX	protein_coding	G protein-coupled receptor associated sorting protein 2
chrX	134741257	134741368	+	134741218	134741368	A5SS	0.5	50	50	ENSMUST00000134986.8	ENSMUSG00000072966.12	Gprasp2	chrX	protein_coding	G protein-coupled receptor associated sorting protein 2
chrX	134740011	134741142	+	134740621	134741142	A5SS&ES	0.5	50	50	ENSMUST00000113136.8	ENSMUSG00000072966.12	Gprasp2	chrX	protein_coding	G protein-coupled receptor associated sorting protein 2
chrX	134740011	134741142	+	134740011	134740746	3pMXE	0.33	50	50	ENSMUST00000150797.2	ENSMUSG00000072966.12	Gprasp2	chrX	protein_coding	G protein-coupled receptor associated sorting protein 2
chrX	134740011;134740621	134740494;134740746	+	134740011	134740746	cassetteExon	0.5	100	100	ENSMUST00000150797.2	ENSMUSG00000072966.12	Gprasp2	chrX	protein_coding	G protein-coupled receptor associated sorting protein 2
chrX	134741439	134741970	+	134741673	134741970	A5SS	0.5	50	50	ENSMUST00000138251.2	ENSMUSG00000072966.12	Gprasp2	chrX	protein_coding	G protein-coupled receptor associated sorting protein 2
chrX	134981872;134982181	134982112;134985846	-	134981872	134985846	cassetteExon	0.5	100	100	ENSMUST00000080929.13	ENSMUSG00000057000.13	Nxf3	chrX	protein_coding	nuclear RNA export factor 3
chrX	135071798	135072385	-	135071798;135072270	135072169;135072385	ES	0.5	50	50	ENSMUST00000163584.8	ENSMUSG00000051579.11	Tceal8	chrX	protein_coding	transcription elongation factor A (SII)-like 8
chrX	135071798	135072385	-	135071798	135072169	A5SS	0.5	50	50	ENSMUST00000136533.2	ENSMUSG00000051579.11	Tceal8	chrX	protein_coding	transcription elongation factor A (SII)-like 8
chrX	135103201	135104263	-	135103201	135104516	A5SS	0.33	50	50	ENSMUST00000066819.11	ENSMUSG00000054034.11	Tceal5	chrX	protein_coding	transcription elongation factor A (SII)-like 5
chrX	135103201	135104387	-	135103201	135104516	A5SS	0.33	50	50	ENSMUST00000066819.11	ENSMUSG00000054034.11	Tceal5	chrX	protein_coding	transcription elongation factor A (SII)-like 5
chrX	135103201	135104387	-	135103201	135104263	A5SS&ES	0.33	50	50	ENSMUST00000151592.8	ENSMUSG00000054034.11	Tceal5	chrX	protein_coding	transcription elongation factor A (SII)-like 5
chrX	135115332	135116086	-	135115332;135115729	135115653;135116086	ES	0.5	50	50	ENSMUST00000058125.9	ENSMUSG00000050071.9	Bex1	chrX	protein_coding	brain expressed X-linked 1
chrX	135115332	135115695	-	135115332	135115653	A5SS	0.33	50	50	ENSMUST00000058125.9	ENSMUSG00000050071.9	Bex1	chrX	protein_coding	brain expressed X-linked 1
chrX	135115332;135115729	135115695;135116086	-	135115332	135116086	cassetteExon	0.5	100	100	ENSMUST00000113120.2	ENSMUSG00000050071.9	Bex1	chrX	protein_coding	brain expressed X-linked 1
chrX	135115332	135116086	-	135115729	135116086	A3SS	0.5	50	50	ENSMUST00000142172.2	ENSMUSG00000050071.9	Bex1	chrX	protein_coding	brain expressed X-linked 1
chrX	135124840	135125651	+	135116172	135125651	A5SS	0.5	50	50	ENSMUST00000126811.8	ENSMUSG00000079428.9	Tceal7	chrX	protein_coding	transcription elongation factor A (SII)-like 7
chrX	135171631	135172012	+	135171631	135172017	A3SS	0.33	50	50	ENSMUST00000178632.8	ENSMUSG00000046432.13	Bex3	chrX	protein_coding	brain expressed X-linked 3
chrX	135171631	135172058	+	135171631	135172017	A3SS	0.33	50	50	ENSMUST00000178632.8	ENSMUSG00000046432.13	Bex3	chrX	protein_coding	brain expressed X-linked 3
chrX	135171631	135172058	+	135171631	135172012	A3SS	0.33	50	50	ENSMUST00000053540.11	ENSMUSG00000046432.13	Bex3	chrX	protein_coding	brain expressed X-linked 3
chrX	135419082;135425976	135425698;135427136	+	135419082	135427136	cassetteExon	0.5	100	100	ENSMUST00000113104.8	ENSMUSG00000031424.17	Kir3dl1	chrX	protein_coding	killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 1
chrX	135491680	135493608	+	135491680	135493655	A3SS	0.5	50	50	ENSMUST00000138047.8	ENSMUSG00000044550.12	Tceal3	chrX	protein_coding	transcription elongation factor A (SII)-like 3
chrX	135494999	135540476	+	135494999	135567873	A3SS	0.25	50	50	ENSMUST00000138047.8	ENSMUSG00000044550.12	Tceal3	chrX	protein_coding	transcription elongation factor A (SII)-like 3
chrX	135494999	135546495	+	135494999	135567873	A3SS	0.25	50	50	ENSMUST00000138047.8	ENSMUSG00000044550.12	Tceal3	chrX	protein_coding	transcription elongation factor A (SII)-like 3
chrX	135494999	135567809	+	135494999	135567873	A3SS	0.25	50	50	ENSMUST00000138047.8	ENSMUSG00000044550.12	Tceal3	chrX	protein_coding	transcription elongation factor A (SII)-like 3
chrX	135567304	135567873	+	135494999	135567873	A5SS	0.33	50	50	ENSMUST00000138047.8	ENSMUSG00000044550.12	Tceal3	chrX	protein_coding	transcription elongation factor A (SII)-like 3
chrX	135567413	135567873	+	135494999	135567873	A5SS	0.33	50	50	ENSMUST00000138047.8	ENSMUSG00000044550.12	Tceal3	chrX	protein_coding	transcription elongation factor A (SII)-like 3
chrX	135494999	135540476	+	135494999	135567809	A3SS	0.25	50	50	ENSMUST00000145648.8	ENSMUSG00000044550.12	Tceal3	chrX	protein_coding	transcription elongation factor A (SII)-like 3
chrX	135494999	135546495	+	135494999	135567809	A3SS	0.25	50	50	ENSMUST00000145648.8	ENSMUSG00000044550.12	Tceal3	chrX	protein_coding	transcription elongation factor A (SII)-like 3
chrX	135567304	135567809	+	135494999	135567809	A5SS	0.5	50	50	ENSMUST00000145648.8	ENSMUSG00000044550.12	Tceal3	chrX	protein_coding	transcription elongation factor A (SII)-like 3
chrX	135494999	135546495	+	135494999	135540476	A3SS&ES	0.5	50	50	ENSMUST00000125067.8	ENSMUSG00000044550.12	Tceal3	chrX	protein_coding	transcription elongation factor A (SII)-like 3
chrX	135567304	135567809	+	135567304	135567873	A3SS	0.5	50	50	ENSMUST00000060904.11	ENSMUSG00000044550.12	Tceal3	chrX	protein_coding	transcription elongation factor A (SII)-like 3
chrX	135567413	135567873	+	135567304	135567873	A5SS	0.33	50	50	ENSMUST00000060904.11	ENSMUSG00000044550.12	Tceal3	chrX	protein_coding	transcription elongation factor A (SII)-like 3
chrX	135635250	135640554	-	135635250;135636371	135636295;135640554	ES	0.5	50	50	ENSMUST00000033797.13	ENSMUSG00000031422.17	Morf4l2	chrX	protein_coding	mortality factor 4 like 2
chrX	135640643	135643573	-	135640643	135642142	5pMXE	0.2	50	50	ENSMUST00000033797.13	ENSMUSG00000031422.17	Morf4l2	chrX	protein_coding	mortality factor 4 like 2
chrX	135640643	135644342	-	135640643	135642142	5pMXE	0.2	50	50	ENSMUST00000033797.13	ENSMUSG00000031422.17	Morf4l2	chrX	protein_coding	mortality factor 4 like 2
chrX	135640643	135641695	-	135640643	135642142	A5SS	0.2	50	50	ENSMUST00000033797.13	ENSMUSG00000031422.17	Morf4l2	chrX	protein_coding	mortality factor 4 like 2
chrX	135640643	135641959	-	135640643	135642142	A5SS	0.2	50	50	ENSMUST00000033797.13	ENSMUSG00000031422.17	Morf4l2	chrX	protein_coding	mortality factor 4 like 2
chrX	135636371	135644342	-	135636371;135640643	135640554;135644342	ES	0.5	50	50	ENSMUST00000113097.8	ENSMUSG00000031422.17	Morf4l2	chrX	protein_coding	mortality factor 4 like 2
chrX	135635250	135643573	-	135635250	135636295	A5SS&ES	0.33	50	50	ENSMUST00000113097.8	ENSMUSG00000031422.17	Morf4l2	chrX	protein_coding	mortality factor 4 like 2
chrX	135640643	135641695	-	135640643	135644342	A5SS	0.2	50	50	ENSMUST00000113097.8	ENSMUSG00000031422.17	Morf4l2	chrX	protein_coding	mortality factor 4 like 2
chrX	135640643	135641959	-	135640643	135644342	A5SS	0.2	50	50	ENSMUST00000113097.8	ENSMUSG00000031422.17	Morf4l2	chrX	protein_coding	mortality factor 4 like 2
chrX	135640643	135643573	-	135640643	135644342	A5SS	0.2	50	50	ENSMUST00000113097.8	ENSMUSG00000031422.17	Morf4l2	chrX	protein_coding	mortality factor 4 like 2
chrX	135640643	135641959	-	135640643	135641695	5pMXE	0.2	50	50	ENSMUST00000166930.8	ENSMUSG00000031422.17	Morf4l2	chrX	protein_coding	mortality factor 4 like 2
chrX	135640643	135643573	-	135640643	135641695	5pMXE	0.2	50	50	ENSMUST00000166930.8	ENSMUSG00000031422.17	Morf4l2	chrX	protein_coding	mortality factor 4 like 2
chrX	135640643	135643573	-	135640643	135641959	5pMXE	0.2	50	50	ENSMUST00000080411.13	ENSMUSG00000031422.17	Morf4l2	chrX	protein_coding	mortality factor 4 like 2
chrX	135640643;135641868	135641695;135641959	-	135640643	135641959	cassetteExon	0.5	100	100	ENSMUST00000080411.13	ENSMUSG00000031422.17	Morf4l2	chrX	protein_coding	mortality factor 4 like 2
chrX	135635250;135640643	135640554;135644342	-	135635250;135636371	135636295;135644342	MXE	0.5	100	100	ENSMUST00000166478.8	ENSMUSG00000031422.17	Morf4l2	chrX	protein_coding	mortality factor 4 like 2
chrX	135635250;135640643	135640554;135643573	-	135635250	135643573	cassetteExon	0.5	100	100	ENSMUST00000137605.2	ENSMUSG00000031422.17	Morf4l2	chrX	protein_coding	mortality factor 4 like 2
chrX	135635250	135643573	-	135635250	135640554	5pMXE	0.33	50	50	ENSMUST00000135731.2	ENSMUSG00000031422.17	Morf4l2	chrX	protein_coding	mortality factor 4 like 2
chrX	135636371	135644342	-	135636371	135640554	5pMXE	0.5	50	50	ENSMUST00000131923.2	ENSMUSG00000031422.17	Morf4l2	chrX	protein_coding	mortality factor 4 like 2
chrX	135635250	135640554	-	135636371	135640554	3pMXE	0.5	50	50	ENSMUST00000137979.2	ENSMUSG00000031422.17	Morf4l2	chrX	protein_coding	mortality factor 4 like 2
chrX	135648197	135658850	+	135648197;135657369	135657243;135658850	ES	0.5	50	50	ENSMUST00000146801.8	ENSMUSG00000087368.8	BC065397	chrX	lncRNA	cDNA sequence BC065397
chrX	135642699	135645242	+	135642719	135645242	A5SS	0.25	50	50	ENSMUST00000146801.8	ENSMUSG00000087368.8	BC065397	chrX	lncRNA	cDNA sequence BC065397
chrX	135644209	135645242	+	135642719	135645242	A5SS	0.25	50	50	ENSMUST00000146801.8	ENSMUSG00000087368.8	BC065397	chrX	lncRNA	cDNA sequence BC065397
chrX	135644421	135645242	+	135642719	135645242	A5SS	0.25	50	50	ENSMUST00000146801.8	ENSMUSG00000087368.8	BC065397	chrX	lncRNA	cDNA sequence BC065397
chrX	135642699;135644209	135644152;135645242	+	135642699	135645242	cassetteExon	0.5	100	100	ENSMUST00000134672.8	ENSMUSG00000087368.8	BC065397	chrX	lncRNA	cDNA sequence BC065397
chrX	135642699;135644421	135644152;135645242	+	135642699	135645242	cassetteExon	0.5	100	100	ENSMUST00000134672.8	ENSMUSG00000087368.8	BC065397	chrX	lncRNA	cDNA sequence BC065397
chrX	135642699;135644209	135644173;135645242	+	135642699	135645242	cassetteExon	0.5	100	100	ENSMUST00000134672.8	ENSMUSG00000087368.8	BC065397	chrX	lncRNA	cDNA sequence BC065397
chrX	135642699;135644421	135644173;135645242	+	135642699	135645242	cassetteExon	0.5	100	100	ENSMUST00000134672.8	ENSMUSG00000087368.8	BC065397	chrX	lncRNA	cDNA sequence BC065397
chrX	135644209	135645242	+	135644209;135644421	135644292;135645242	ES	0.25	50	50	ENSMUST00000152379.2	ENSMUSG00000087368.8	BC065397	chrX	lncRNA	cDNA sequence BC065397
chrX	135642699	135644173	+	135642699	135644152	A3SS	0.33	50	50	ENSMUST00000152379.2	ENSMUSG00000087368.8	BC065397	chrX	lncRNA	cDNA sequence BC065397
chrX	135666513	135689270	+	135662837	135689270	A5SS	0.5	50	50	ENSMUST00000134066.8	ENSMUSG00000087368.8	BC065397	chrX	lncRNA	cDNA sequence BC065397
chrX	135642699	135645242	+	135644209	135645242	5pMXE	0.25	50	50	ENSMUST00000131947.2	ENSMUSG00000087368.8	BC065397	chrX	lncRNA	cDNA sequence BC065397
chrX	135732858	135734017	+	135732963	135734017	A5SS	0.5	50	50	ENSMUST00000033800.13	ENSMUSG00000031425.16	Plp1	chrX	protein_coding	proteolipid protein (myelin) 1
chrX	135874988	135876147	-	135857588	135876147	A3SS	0.5	50	50	ENSMUST00000127404.8	ENSMUSG00000072955.15	Tmsb15l	chrX	protein_coding	thymosin beta 15b like
chrX	135857588	135858648	-	135857588	135876147	A5SS	0.5	50	50	ENSMUST00000127404.8	ENSMUSG00000072955.15	Tmsb15l	chrX	protein_coding	thymosin beta 15b like
chrX	135904558	135916006	-	135884370	135916006	A3SS	0.5	50	50	ENSMUST00000113069.9	ENSMUSG00000044348.15	Slc25a53	chrX	protein_coding	solute carrier family 25, member 53
chrX	135884370	135888895	-	135884370	135916006	A5SS	0.33	50	50	ENSMUST00000113069.9	ENSMUSG00000044348.15	Slc25a53	chrX	protein_coding	solute carrier family 25, member 53
chrX	135884370	135893715	-	135884370	135916006	A5SS	0.33	50	50	ENSMUST00000113069.9	ENSMUSG00000044348.15	Slc25a53	chrX	protein_coding	solute carrier family 25, member 53
chrX	135917088	135938915	-	135917088	135928739	A5SS&ES	0.5	50	50	ENSMUST00000113069.9	ENSMUSG00000044348.15	Slc25a53	chrX	protein_coding	solute carrier family 25, member 53
chrX	135933249	135938637	-	135933249	135938973	A5SS	0.25	50	50	ENSMUST00000113069.9	ENSMUSG00000044348.15	Slc25a53	chrX	protein_coding	solute carrier family 25, member 53
chrX	135933249	135938679	-	135933249	135938973	A5SS	0.25	50	50	ENSMUST00000113069.9	ENSMUSG00000044348.15	Slc25a53	chrX	protein_coding	solute carrier family 25, member 53
chrX	135933249	135938915	-	135933249	135938973	A5SS	0.25	50	50	ENSMUST00000113069.9	ENSMUSG00000044348.15	Slc25a53	chrX	protein_coding	solute carrier family 25, member 53
chrX	135884370;135888954	135888895;135893715	-	135884370	135893715	cassetteExon	0.5	100	100	ENSMUST00000171738.2	ENSMUSG00000044348.15	Slc25a53	chrX	protein_coding	solute carrier family 25, member 53
chrX	135933249	135938915	-	135933249	135938679	5pMXE	0.25	50	50	ENSMUST00000125747.8	ENSMUSG00000044348.15	Slc25a53	chrX	protein_coding	solute carrier family 25, member 53
chrX	135933249	135938637	-	135933249	135938679	A5SS	0.25	50	50	ENSMUST00000125747.8	ENSMUSG00000044348.15	Slc25a53	chrX	protein_coding	solute carrier family 25, member 53
chrX	135933249	135938637	-	135933249	135938915	A5SS	0.25	50	50	ENSMUST00000123516.8	ENSMUSG00000044348.15	Slc25a53	chrX	protein_coding	solute carrier family 25, member 53
chrX	135933249	135938915	-	135917088	135938915	A3SS	0.5	50	50	ENSMUST00000148253.2	ENSMUSG00000044348.15	Slc25a53	chrX	protein_coding	solute carrier family 25, member 53
chrX	135894153	135894456	+	135894101	135894456	A5SS	0.5	50	50	ENSMUST00000113067.8	ENSMUSG00000031428.12	Zcchc18	chrX	protein_coding	zinc finger, CCHC domain containing 18
chrX	136020445	136022695	-	136020445	136020693	5pMXE	0.5	50	50	ENSMUST00000074698.3	ENSMUSG00000023443.14	Esx1	chrX	protein_coding	extraembryonic, spermatogenesis, homeobox 1
chrX	137137402	137405731	+	137137402	137405733	A3SS	0.5	50	50	ENSMUST00000113063.8	ENSMUSG00000059203.11	Il1rapl2	chrX	protein_coding	interleukin 1 receptor accessory protein-like 2
chrX	137896730;137898333	137898191;137898569	+	137896730	137898569	cassetteExon	0.5	100	100	ENSMUST00000064937.14	ENSMUSG00000052854.16	Nrk	chrX	protein_coding	Nik related kinase
chrX	137865763	137866936	+	137865763	137867135	A3SS	0.5	50	50	ENSMUST00000064937.14	ENSMUSG00000052854.16	Nrk	chrX	protein_coding	Nik related kinase
chrX	137984467;137984647	137984554;137985937	-	137984467	137985937	cassetteExon	0.5	100	100	ENSMUST00000033626.15	ENSMUSG00000031271.15	Serpina7	chrX	protein_coding	serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7
chrX	137984467;137984650	137984554;137985937	-	137984467	137985937	cassetteExon	0.5	100	100	ENSMUST00000033626.15	ENSMUSG00000031271.15	Serpina7	chrX	protein_coding	serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7
chrX	137984467	137984554	-	137983936	137984554	A3SS	0.5	50	50	ENSMUST00000060824.4	ENSMUSG00000031271.15	Serpina7	chrX	protein_coding	serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7
chrX	137984467	137985937	-	137984647	137985937	A3SS&ES	0.33	50	50	ENSMUST00000060824.4	ENSMUSG00000031271.15	Serpina7	chrX	protein_coding	serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7
chrX	137984650	137985937	-	137984647	137985937	A3SS	0.33	50	50	ENSMUST00000060824.4	ENSMUSG00000031271.15	Serpina7	chrX	protein_coding	serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7
chrX	138111555;138112184	138112108;138113840	+	138111555	138113840	cassetteExon	0.5	100	100	ENSMUST00000169886.8	ENSMUSG00000042515.14	Pwwp3b	chrX	protein_coding	PWWP domain containing 3B
chrX	138117963	138132035	+	138113987	138132035	A5SS	0.33	50	50	ENSMUST00000169886.8	ENSMUSG00000042515.14	Pwwp3b	chrX	protein_coding	PWWP domain containing 3B
chrX	138119057	138132035	+	138113987	138132035	A5SS	0.33	50	50	ENSMUST00000169886.8	ENSMUSG00000042515.14	Pwwp3b	chrX	protein_coding	PWWP domain containing 3B
chrX	138117963;138119057	138118897;138132035	+	138117963	138132035	cassetteExon	0.5	100	100	ENSMUST00000166444.8	ENSMUSG00000042515.14	Pwwp3b	chrX	protein_coding	PWWP domain containing 3B
chrX	138257122	138258358	-	138257122	138257354	5pMXE	0.5	50	50	ENSMUST00000126339.9	ENSMUSG00000086807.9	Platr21	chrX	lncRNA	pluripotency associated transcript 21
chrX	138412398	138413892	+	138412398	138413895	A3SS	0.5	50	50	ENSMUST00000046763.13	ENSMUSG00000042498.17	Radx	chrX	protein_coding	RPA1 related single stranded DNA binding protein, X-linked
chrX	138381251	138393390	+	138381887	138393390	A5SS	0.5	50	50	ENSMUST00000046763.13	ENSMUSG00000042498.17	Radx	chrX	protein_coding	RPA1 related single stranded DNA binding protein, X-linked
chrX	138566289	138572485	+	138566289	138572484	A3SS	0.5	50	50	ENSMUST00000113027.8	ENSMUSG00000031438.12	Rnf128	chrX	protein_coding	ring finger protein 128
chrX	138512038	138543035	+	138464632	138543035	A5SS	0.5	50	50	ENSMUST00000113027.8	ENSMUSG00000031438.12	Rnf128	chrX	protein_coding	ring finger protein 128
chrX	138703637	138709275	+	138701759	138709275	A5SS	0.33	50	50	ENSMUST00000054889.4	ENSMUSG00000047230.7	Cldn2	chrX	protein_coding	claudin 2
chrX	138707008	138709275	+	138701759	138709275	A5SS	0.33	50	50	ENSMUST00000054889.4	ENSMUSG00000047230.7	Cldn2	chrX	protein_coding	claudin 2
chrX	138707008	138709275	+	138703637	138709275	A5SS	0.33	50	50	ENSMUST00000172779.2	ENSMUSG00000047230.7	Cldn2	chrX	protein_coding	claudin 2
chrX	138765376	138772021	-	138765376;138771891	138771819;138772021	ES	0.5	50	50	ENSMUST00000033811.14	ENSMUSG00000031434.16	Morc4	chrX	protein_coding	microrchidia 4
chrX	138758375	138758497	-	138755740	138758497	A3SS	0.5	50	50	ENSMUST00000033811.14	ENSMUSG00000031434.16	Morc4	chrX	protein_coding	microrchidia 4
chrX	138752881	138755228	-	138752881	138755159	A5SS	0.5	50	50	ENSMUST00000033811.14	ENSMUSG00000031434.16	Morc4	chrX	protein_coding	microrchidia 4
chrX	138723577	138723879	-	138723577	138723917	A5SS	0.5	50	50	ENSMUST00000136415.9	ENSMUSG00000031434.16	Morc4	chrX	protein_coding	microrchidia 4
chrX	138765376	138772021	-	138765376	138771819	5pMXE	0.5	50	50	ENSMUST00000165274.2	ENSMUSG00000031434.16	Morc4	chrX	protein_coding	microrchidia 4
chrX	138869348;138892336	138892265;138894047	-	138869348	138894047	cassetteExon	0.5	100	100	ENSMUST00000087400.12	ENSMUSG00000031433.16	Rbm41	chrX	protein_coding	RNA binding motif protein 41
chrX	138895977;138897495	138897414;138899249	-	138895977	138899249	cassetteExon	0.5	100	100	ENSMUST00000087400.12	ENSMUSG00000031433.16	Rbm41	chrX	protein_coding	RNA binding motif protein 41
chrX	138846652	138855656	-	138791325	138855656	A3SS	0.5	50	50	ENSMUST00000087400.12	ENSMUSG00000031433.16	Rbm41	chrX	protein_coding	RNA binding motif protein 41
chrX	138896145	138899249	-	138895977	138899249	A3SS	0.33	50	50	ENSMUST00000087400.12	ENSMUSG00000031433.16	Rbm41	chrX	protein_coding	RNA binding motif protein 41
chrX	138894853	138895922	-	138894853	138895861	A5SS	0.5	50	50	ENSMUST00000087400.12	ENSMUSG00000031433.16	Rbm41	chrX	protein_coding	RNA binding motif protein 41
chrX	138896145	138899249	-	138897495	138899249	A3SS&ES	0.33	50	50	ENSMUST00000113007.8	ENSMUSG00000031433.16	Rbm41	chrX	protein_coding	RNA binding motif protein 41
chrX	138939904;138961571	138961524;138963162	-	138939904	138963162	cassetteExon	0.5	100	100	ENSMUST00000101212.9	ENSMUSG00000072944.12	Nup62cl	chrX	protein_coding	nucleoporin 62 C-terminal like
chrX	138939904	138962997	-	138939904	138963162	A5SS	0.25	50	50	ENSMUST00000101212.9	ENSMUSG00000072944.12	Nup62cl	chrX	protein_coding	nucleoporin 62 C-terminal like
chrX	138939904	138963308	-	138939904	138963162	A5SS	0.25	50	50	ENSMUST00000101212.9	ENSMUSG00000072944.12	Nup62cl	chrX	protein_coding	nucleoporin 62 C-terminal like
chrX	138939904	138963308	-	138939904	138962997	5pMXE	0.25	50	50	ENSMUST00000154385.8	ENSMUSG00000072944.12	Nup62cl	chrX	protein_coding	nucleoporin 62 C-terminal like
chrX	138939904	138961524	-	138939904	138962997	A5SS	0.25	50	50	ENSMUST00000154385.8	ENSMUSG00000072944.12	Nup62cl	chrX	protein_coding	nucleoporin 62 C-terminal like
chrX	138939904	138961524	-	138939904	138963308	A5SS	0.25	50	50	ENSMUST00000133780.8	ENSMUSG00000072944.12	Nup62cl	chrX	protein_coding	nucleoporin 62 C-terminal like
chrX	139268508	139269568	+	139266580	139269568	A5SS	0.5	50	50	ENSMUST00000208130.2	ENSMUSG00000042425.19	Frmpd3	chrX	protein_coding	FERM and PDZ domain containing 3
chrX	139442905	139443595	-	139442905	139443260	5pMXE	0.25	50	50	ENSMUST00000112995.3	ENSMUSG00000031431.14	Tsc22d3	chrX	protein_coding	TSC22 domain family, member 3
chrX	139442905	139448945	-	139442905	139443260	5pMXE	0.25	50	50	ENSMUST00000112995.3	ENSMUSG00000031431.14	Tsc22d3	chrX	protein_coding	TSC22 domain family, member 3
chrX	139442905	139498877	-	139442905	139443260	5pMXE	0.25	50	50	ENSMUST00000112995.3	ENSMUSG00000031431.14	Tsc22d3	chrX	protein_coding	TSC22 domain family, member 3
chrX	139442905	139448945	-	139442905	139443595	5pMXE	0.25	50	50	ENSMUST00000055738.12	ENSMUSG00000031431.14	Tsc22d3	chrX	protein_coding	TSC22 domain family, member 3
chrX	139442905	139498877	-	139442905	139443595	5pMXE	0.25	50	50	ENSMUST00000055738.12	ENSMUSG00000031431.14	Tsc22d3	chrX	protein_coding	TSC22 domain family, member 3
chrX	139442905	139448945	-	139442905	139498877	A5SS	0.25	50	50	ENSMUST00000112996.9	ENSMUSG00000031431.14	Tsc22d3	chrX	protein_coding	TSC22 domain family, member 3
chrX	139444160	139448945	-	139442905	139448945	A3SS	0.5	50	50	ENSMUST00000123898.2	ENSMUSG00000031431.14	Tsc22d3	chrX	protein_coding	TSC22 domain family, member 3
chrX	139566027	139578745	+	139565391	139578745	A5SS	0.5	50	50	ENSMUST00000128809.2	ENSMUSG00000000266.12	Mid2	chrX	protein_coding	midline 2
chrX	139823998	139827072	+	139817100	139827072	A5SS	0.5	50	50	ENSMUST00000033806.5	ENSMUSG00000031430.9	Vsig1	chrX	protein_coding	V-set and immunoglobulin domain containing 1
chrX	139850058	139852975	-	139850058	139852896	A5SS	0.5	50	50	ENSMUST00000033805.15	ENSMUSG00000031429.15	Psmd10	chrX	protein_coding	proteasome (prosome, macropain) 26S subunit, non-ATPase, 10
chrX	139887138	139890907	+	139887138;139888986	139888915;139890907	ES	0.33	50	50	ENSMUST00000112971.2	ENSMUSG00000079418.6	Atg4a	chrX	protein_coding	autophagy related 4A, cysteine peptidase
chrX	139896189	139941723	+	139896189;139896390	139896312;139941723	ES	0.5	50	50	ENSMUST00000112971.2	ENSMUSG00000079418.6	Atg4a	chrX	protein_coding	autophagy related 4A, cysteine peptidase
chrX	139887138;139889114	139889029;139890907	+	139887138;139888986	139888915;139890907	MXE	0.5	100	100	ENSMUST00000112971.2	ENSMUSG00000079418.6	Atg4a	chrX	protein_coding	autophagy related 4A, cysteine peptidase
chrX	139866398	139887028	+	139857720	139887028	A5SS	0.33	50	50	ENSMUST00000112971.2	ENSMUSG00000079418.6	Atg4a	chrX	protein_coding	autophagy related 4A, cysteine peptidase
chrX	139880919	139887028	+	139857720	139887028	A5SS	0.33	50	50	ENSMUST00000112971.2	ENSMUSG00000079418.6	Atg4a	chrX	protein_coding	autophagy related 4A, cysteine peptidase
chrX	139893667	139893818	+	139893667	139896011	A3SS	0.5	50	50	ENSMUST00000239544.1	ENSMUSG00000079418.6	Atg4a	chrX	protein_coding	autophagy related 4A, cysteine peptidase
chrX	139895431	139896011	+	139893667	139896011	A5SS	0.5	50	50	ENSMUST00000239544.1	ENSMUSG00000079418.6	Atg4a	chrX	protein_coding	autophagy related 4A, cysteine peptidase
chrX	139887138;139889114	139888915;139890907	+	139887138	139890907	cassetteExon	0.5	100	100	ENSMUST00000239541.1	ENSMUSG00000079418.6	Atg4a	chrX	protein_coding	autophagy related 4A, cysteine peptidase
chrX	139887138;139889114	139889029;139890907	+	139887138	139890907	cassetteExon	0.5	100	100	ENSMUST00000239541.1	ENSMUSG00000079418.6	Atg4a	chrX	protein_coding	autophagy related 4A, cysteine peptidase
chrX	139896189	139941723	+	139896189	139896312	3pMXE	0.5	50	50	ENSMUST00000239542.1	ENSMUSG00000079418.6	Atg4a	chrX	protein_coding	autophagy related 4A, cysteine peptidase
chrX	139880919	139887028	+	139866398	139887028	A5SS	0.33	50	50	ENSMUST00000239542.1	ENSMUSG00000079418.6	Atg4a	chrX	protein_coding	autophagy related 4A, cysteine peptidase
chrX	139887138	139889029	+	139887138	139888915	3pMXE	0.33	50	50	ENSMUST00000239543.1	ENSMUSG00000079418.6	Atg4a	chrX	protein_coding	autophagy related 4A, cysteine peptidase
chrX	139887138	139890907	+	139887138	139888915	3pMXE	0.33	50	50	ENSMUST00000239543.1	ENSMUSG00000079418.6	Atg4a	chrX	protein_coding	autophagy related 4A, cysteine peptidase
chrX	139969929	139970661	-	139966588	139970661	A3SS	0.5	50	50	ENSMUST00000101205.3	ENSMUSG00000031273.17	Col4a6	chrX	protein_coding	collagen, type IV, alpha 6
chrX	140439866	140441528	+	140439866	140449838	A3SS	0.5	50	50	ENSMUST00000130732.2	ENSMUSG00000031274.17	Col4a5	chrX	protein_coding	collagen, type IV, alpha 5
chrX	140447680	140449838	+	140439866	140449838	A5SS	0.5	50	50	ENSMUST00000130732.2	ENSMUSG00000031274.17	Col4a5	chrX	protein_coding	collagen, type IV, alpha 5
chrX	141011009	141011287	+	141009927	141011287	A5SS	0.5	50	50	ENSMUST00000112916.9	ENSMUSG00000042271.14	Nxt2	chrX	protein_coding	nuclear transport factor 2-like export factor 2
chrX	141011957	141012520	+	141011377	141012520	A5SS	0.5	50	50	ENSMUST00000112916.9	ENSMUSG00000042271.14	Nxt2	chrX	protein_coding	nuclear transport factor 2-like export factor 2
chrX	141103830;141104852	141104776;141110972	-	141103830	141110972	cassetteExon	0.5	100	100	ENSMUST00000112907.8	ENSMUSG00000031278.13	Acsl4	chrX	protein_coding	acyl-CoA synthetase long-chain family member 4
chrX	141134611	141143383	-	141134904	141143383	A3SS	0.33	50	50	ENSMUST00000112907.8	ENSMUSG00000031278.13	Acsl4	chrX	protein_coding	acyl-CoA synthetase long-chain family member 4
chrX	141134614	141143383	-	141134904	141143383	A3SS	0.33	50	50	ENSMUST00000112907.8	ENSMUSG00000031278.13	Acsl4	chrX	protein_coding	acyl-CoA synthetase long-chain family member 4
chrX	141143432	141173301	-	141143480	141173301	A3SS	0.5	50	50	ENSMUST00000112907.8	ENSMUSG00000031278.13	Acsl4	chrX	protein_coding	acyl-CoA synthetase long-chain family member 4
chrX	141134611	141143383	-	141134614	141143383	A3SS	0.33	50	50	ENSMUST00000112904.8	ENSMUSG00000031278.13	Acsl4	chrX	protein_coding	acyl-CoA synthetase long-chain family member 4
chrX	141464552	141553963	+	141464552;141535085	141535036;141553963	ES	0.5	50	50	ENSMUST00000112889.8	ENSMUSG00000047045.18	Tmem164	chrX	protein_coding	transmembrane protein 164
chrX	141554029	141615497	+	141554029;141589064	141588986;141615497	ES	0.33	50	50	ENSMUST00000112889.8	ENSMUSG00000047045.18	Tmem164	chrX	protein_coding	transmembrane protein 164
chrX	141615597;141624641	141624579;141625406	+	141615597;141617389	141617181;141625406	MXE	0.5	100	100	ENSMUST00000112889.8	ENSMUSG00000047045.18	Tmem164	chrX	protein_coding	transmembrane protein 164
chrX	141617389;141624641	141624579;141625406	+	141617389	141625406	cassetteExon	0.5	100	100	ENSMUST00000112889.8	ENSMUSG00000047045.18	Tmem164	chrX	protein_coding	transmembrane protein 164
chrX	141464552	141465287	+	141464552	141535036	A3SS	0.33	50	50	ENSMUST00000112889.8	ENSMUSG00000047045.18	Tmem164	chrX	protein_coding	transmembrane protein 164
chrX	141465945	141535036	+	141464552	141535036	A5SS	0.5	50	50	ENSMUST00000112889.8	ENSMUSG00000047045.18	Tmem164	chrX	protein_coding	transmembrane protein 164
chrX	141608802	141615497	+	141589064	141615497	A5SS	0.33	50	50	ENSMUST00000112889.8	ENSMUSG00000047045.18	Tmem164	chrX	protein_coding	transmembrane protein 164
chrX	141615597	141624579	+	141615597	141617181	3pMXE	0.5	50	50	ENSMUST00000101198.9	ENSMUSG00000047045.18	Tmem164	chrX	protein_coding	transmembrane protein 164
chrX	141464552	141465287	+	141464552	141553963	A3SS	0.33	50	50	ENSMUST00000101198.9	ENSMUSG00000047045.18	Tmem164	chrX	protein_coding	transmembrane protein 164
chrX	141608802	141615497	+	141554029	141615497	A5SS	0.33	50	50	ENSMUST00000112891.8	ENSMUSG00000047045.18	Tmem164	chrX	protein_coding	transmembrane protein 164
chrX	141464552	141535036	+	141464552;141465945	141465287;141535036	ES	0.5	50	50	ENSMUST00000087333.9	ENSMUSG00000047045.18	Tmem164	chrX	protein_coding	transmembrane protein 164
chrX	141465945	141535031	+	141465945	141535036	A3SS	0.5	50	50	ENSMUST00000087333.9	ENSMUSG00000047045.18	Tmem164	chrX	protein_coding	transmembrane protein 164
chrX	141464935	141465287	+	141464552	141465287	A5SS	0.5	50	50	ENSMUST00000087333.9	ENSMUSG00000047045.18	Tmem164	chrX	protein_coding	transmembrane protein 164
chrX	141615597	141624579	+	141615597;141617389	141617181;141624579	ES	0.5	50	50	ENSMUST00000133634.8	ENSMUSG00000047045.18	Tmem164	chrX	protein_coding	transmembrane protein 164
chrX	142111063	142148893	-	142111060	142148893	A3SS	0.5	50	50	ENSMUST00000063029.13	ENSMUSG00000031283.17	Chrdl1	chrX	protein_coding	chordin-like 1
chrX	142492744	142498132	+	142492744;142496934	142496890;142498132	ES	0.5	50	50	ENSMUST00000033640.14	ENSMUSG00000031284.17	Pak3	chrX	protein_coding	p21 (RAC1) activated kinase 3
chrX	142301759;142311695	142311536;142476283	+	142301759	142476283	cassetteExon	0.5	100	100	ENSMUST00000033640.14	ENSMUSG00000031284.17	Pak3	chrX	protein_coding	p21 (RAC1) activated kinase 3
chrX	142492744;142495336	142495274;142496890	+	142492744	142496890	cassetteExon	0.5	100	100	ENSMUST00000033640.14	ENSMUSG00000031284.17	Pak3	chrX	protein_coding	p21 (RAC1) activated kinase 3
chrX	142447318	142476283	+	142301759	142476283	A5SS	0.14	50	50	ENSMUST00000033640.14	ENSMUSG00000031284.17	Pak3	chrX	protein_coding	p21 (RAC1) activated kinase 3
chrX	142447610	142476283	+	142301759	142476283	A5SS	0.14	50	50	ENSMUST00000033640.14	ENSMUSG00000031284.17	Pak3	chrX	protein_coding	p21 (RAC1) activated kinase 3
chrX	142448839	142476283	+	142301759	142476283	A5SS	0.14	50	50	ENSMUST00000033640.14	ENSMUSG00000031284.17	Pak3	chrX	protein_coding	p21 (RAC1) activated kinase 3
chrX	142454704	142476283	+	142301759	142476283	A5SS	0.14	50	50	ENSMUST00000033640.14	ENSMUSG00000031284.17	Pak3	chrX	protein_coding	p21 (RAC1) activated kinase 3
chrX	142461147	142476283	+	142301759	142476283	A5SS	0.14	50	50	ENSMUST00000033640.14	ENSMUSG00000031284.17	Pak3	chrX	protein_coding	p21 (RAC1) activated kinase 3
chrX	142447318	142476283	+	142311695	142476283	A5SS	0.14	50	50	ENSMUST00000134402.8	ENSMUSG00000031284.17	Pak3	chrX	protein_coding	p21 (RAC1) activated kinase 3
chrX	142447610	142476283	+	142311695	142476283	A5SS	0.14	50	50	ENSMUST00000134402.8	ENSMUSG00000031284.17	Pak3	chrX	protein_coding	p21 (RAC1) activated kinase 3
chrX	142448839	142476283	+	142311695	142476283	A5SS	0.14	50	50	ENSMUST00000134402.8	ENSMUSG00000031284.17	Pak3	chrX	protein_coding	p21 (RAC1) activated kinase 3
chrX	142454704	142476283	+	142311695	142476283	A5SS	0.14	50	50	ENSMUST00000134402.8	ENSMUSG00000031284.17	Pak3	chrX	protein_coding	p21 (RAC1) activated kinase 3
chrX	142461147	142476283	+	142311695	142476283	A5SS	0.14	50	50	ENSMUST00000134402.8	ENSMUSG00000031284.17	Pak3	chrX	protein_coding	p21 (RAC1) activated kinase 3
chrX	142492744	142495274	+	142492744	142498132	A3SS	0.33	50	50	ENSMUST00000112868.8	ENSMUSG00000031284.17	Pak3	chrX	protein_coding	p21 (RAC1) activated kinase 3
chrX	142447610	142476283	+	142447318	142476283	A5SS	0.14	50	50	ENSMUST00000112868.8	ENSMUSG00000031284.17	Pak3	chrX	protein_coding	p21 (RAC1) activated kinase 3
chrX	142448839	142476283	+	142447318	142476283	A5SS	0.14	50	50	ENSMUST00000112868.8	ENSMUSG00000031284.17	Pak3	chrX	protein_coding	p21 (RAC1) activated kinase 3
chrX	142454704	142476283	+	142447318	142476283	A5SS	0.14	50	50	ENSMUST00000112868.8	ENSMUSG00000031284.17	Pak3	chrX	protein_coding	p21 (RAC1) activated kinase 3
chrX	142461147	142476283	+	142447318	142476283	A5SS	0.14	50	50	ENSMUST00000112868.8	ENSMUSG00000031284.17	Pak3	chrX	protein_coding	p21 (RAC1) activated kinase 3
chrX	142447610	142476283	+	142447610;142448839	142448729;142476283	ES	0.25	50	50	ENSMUST00000126592.8	ENSMUSG00000031284.17	Pak3	chrX	protein_coding	p21 (RAC1) activated kinase 3
chrX	142447610;142448599	142448540;142448729	+	142447610	142448729	cassetteExon	0.5	100	100	ENSMUST00000126592.8	ENSMUSG00000031284.17	Pak3	chrX	protein_coding	p21 (RAC1) activated kinase 3
chrX	142448839;142454704	142454558;142476283	+	142448839	142476283	cassetteExon	0.5	100	100	ENSMUST00000126592.8	ENSMUSG00000031284.17	Pak3	chrX	protein_coding	p21 (RAC1) activated kinase 3
chrX	142448839	142454009	+	142448839	142476283	A3SS	0.33	50	50	ENSMUST00000126592.8	ENSMUSG00000031284.17	Pak3	chrX	protein_coding	p21 (RAC1) activated kinase 3
chrX	142461147	142476283	+	142448839	142476283	A5SS	0.25	50	50	ENSMUST00000126592.8	ENSMUSG00000031284.17	Pak3	chrX	protein_coding	p21 (RAC1) activated kinase 3
chrX	142447610;142448839	142448540;142476283	+	142447610	142476283	cassetteExon	0.5	100	100	ENSMUST00000156449.8	ENSMUSG00000031284.17	Pak3	chrX	protein_coding	p21 (RAC1) activated kinase 3
chrX	142454704	142476283	+	142447610	142476283	A5SS	0.14	50	50	ENSMUST00000156449.8	ENSMUSG00000031284.17	Pak3	chrX	protein_coding	p21 (RAC1) activated kinase 3
chrX	142461147	142476283	+	142447610	142476283	A5SS	0.14	50	50	ENSMUST00000156449.8	ENSMUSG00000031284.17	Pak3	chrX	protein_coding	p21 (RAC1) activated kinase 3
chrX	142448839	142454009	+	142448839	142454558	A3SS	0.33	50	50	ENSMUST00000112865.8	ENSMUSG00000031284.17	Pak3	chrX	protein_coding	p21 (RAC1) activated kinase 3
chrX	142461147	142476283	+	142454704	142476283	A5SS	0.25	50	50	ENSMUST00000112865.8	ENSMUSG00000031284.17	Pak3	chrX	protein_coding	p21 (RAC1) activated kinase 3
chrX	142448839;142454704	142454558;142476283	+	142448839;142461147	142454009;142476283	MXE	0.5	100	100	ENSMUST00000112863.8	ENSMUSG00000031284.17	Pak3	chrX	protein_coding	p21 (RAC1) activated kinase 3
chrX	142646603	142653606	-	142646603	142653603	A5SS	0.5	50	50	ENSMUST00000033642.10	ENSMUSG00000031285.15	Dcx	chrX	protein_coding	doublecortin
chrX	142653700	142658766	-	142653700	142658751	A5SS	0.5	50	50	ENSMUST00000033642.10	ENSMUSG00000031285.15	Dcx	chrX	protein_coding	doublecortin
chrX	142714322	142715893	-	142714322	142716066	A5SS	0.5	50	50	ENSMUST00000033642.10	ENSMUSG00000031285.15	Dcx	chrX	protein_coding	doublecortin
chrX	143105146	143119108	+	143105146	143107012	3pMXE	0.25	50	50	ENSMUST00000070801.11	ENSMUSG00000041718.17	Alg13	chrX	protein_coding	asparagine-linked glycosylation 13
chrX	143105146	143121960	+	143105146	143107012	3pMXE	0.25	50	50	ENSMUST00000070801.11	ENSMUSG00000041718.17	Alg13	chrX	protein_coding	asparagine-linked glycosylation 13
chrX	143105146;143106523	143106351;143107012	+	143105146	143107012	cassetteExon	0.5	100	100	ENSMUST00000070801.11	ENSMUSG00000041718.17	Alg13	chrX	protein_coding	asparagine-linked glycosylation 13
chrX	143101117	143102509	+	143101117	143102895	A3SS	0.33	50	50	ENSMUST00000070801.11	ENSMUSG00000041718.17	Alg13	chrX	protein_coding	asparagine-linked glycosylation 13
chrX	143101117	143102999	+	143101117	143102895	A3SS	0.33	50	50	ENSMUST00000070801.11	ENSMUSG00000041718.17	Alg13	chrX	protein_coding	asparagine-linked glycosylation 13
chrX	143102998	143105008	+	143103057	143105008	A5SS	0.5	50	50	ENSMUST00000070801.11	ENSMUSG00000041718.17	Alg13	chrX	protein_coding	asparagine-linked glycosylation 13
chrX	143136624	143139792	+	143136624;143138648	143138580;143139792	ES	0.5	50	50	ENSMUST00000238864.2	ENSMUSG00000041718.17	Alg13	chrX	protein_coding	asparagine-linked glycosylation 13
chrX	143139957	143150895	+	143139957;143147103	143146861;143150895	ES	0.33	50	50	ENSMUST00000238864.2	ENSMUSG00000041718.17	Alg13	chrX	protein_coding	asparagine-linked glycosylation 13
chrX	143101117;143102660	143102509;143102999	+	143101117	143102999	cassetteExon	0.5	100	100	ENSMUST00000238864.2	ENSMUSG00000041718.17	Alg13	chrX	protein_coding	asparagine-linked glycosylation 13
chrX	143147103;143147971	143147932;143150895	+	143147103	143150895	cassetteExon	0.5	100	100	ENSMUST00000238864.2	ENSMUSG00000041718.17	Alg13	chrX	protein_coding	asparagine-linked glycosylation 13
chrX	143105146	143119108	+	143105054	143119108	A5SS	0.33	50	50	ENSMUST00000238864.2	ENSMUSG00000041718.17	Alg13	chrX	protein_coding	asparagine-linked glycosylation 13
chrX	143105146	143121960	+	143120171	143121960	A5SS&ES	0.5	50	50	ENSMUST00000238864.2	ENSMUSG00000041718.17	Alg13	chrX	protein_coding	asparagine-linked glycosylation 13
chrX	143118898	143119108	+	143105054	143119108	A5SS	0.33	50	50	ENSMUST00000238864.2	ENSMUSG00000041718.17	Alg13	chrX	protein_coding	asparagine-linked glycosylation 13
chrX	143105146	143106351	+	143105146	143119108	A3SS	0.25	50	50	ENSMUST00000197316.5	ENSMUSG00000041718.17	Alg13	chrX	protein_coding	asparagine-linked glycosylation 13
chrX	143118898	143119108	+	143105146	143119108	A5SS	0.33	50	50	ENSMUST00000197316.5	ENSMUSG00000041718.17	Alg13	chrX	protein_coding	asparagine-linked glycosylation 13
chrX	143147971	143150895	+	143139957	143150895	A5SS	0.33	50	50	ENSMUST00000197316.5	ENSMUSG00000041718.17	Alg13	chrX	protein_coding	asparagine-linked glycosylation 13
chrX	143105146	143106351	+	143105146	143121960	A3SS	0.25	50	50	ENSMUST00000198039.5	ENSMUSG00000041718.17	Alg13	chrX	protein_coding	asparagine-linked glycosylation 13
chrX	143105146	143119108	+	143105146	143121960	A3SS	0.25	50	50	ENSMUST00000198039.5	ENSMUSG00000041718.17	Alg13	chrX	protein_coding	asparagine-linked glycosylation 13
chrX	143123788	143125392	+	143123788	143128608	A3SS	0.5	50	50	ENSMUST00000198039.5	ENSMUSG00000041718.17	Alg13	chrX	protein_coding	asparagine-linked glycosylation 13
chrX	143127332	143128608	+	143123788	143128608	A5SS	0.5	50	50	ENSMUST00000198039.5	ENSMUSG00000041718.17	Alg13	chrX	protein_coding	asparagine-linked glycosylation 13
chrX	143128716	143129678	+	143128716	143133279	A3SS	0.5	50	50	ENSMUST00000149427.8	ENSMUSG00000041718.17	Alg13	chrX	protein_coding	asparagine-linked glycosylation 13
chrX	143132415	143133279	+	143128716	143133279	A5SS	0.5	50	50	ENSMUST00000149427.8	ENSMUSG00000041718.17	Alg13	chrX	protein_coding	asparagine-linked glycosylation 13
chrX	144124329	144132014	-	144124329	144131791	5pMXE	0.5	50	50	ENSMUST00000040084.10	ENSMUSG00000041700.10	Lhfpl1	chrX	protein_coding	lipoma HMGIC fusion partner-like 1
chrX	144263454	144279985	-	144263454	144269761	5pMXE	0.5	50	50	ENSMUST00000125271.8	ENSMUSG00000041688.17	Amot	chrX	protein_coding	angiomotin
chrX	144272968	144279985	-	144263454	144279985	A3SS	0.5	50	50	ENSMUST00000112835.8	ENSMUSG00000041688.17	Amot	chrX	protein_coding	angiomotin
chrX	145764601	145855381	+	145764601	145769979	3pMXE	0.5	50	50	ENSMUST00000149260.8	ENSMUSG00000041380.14	Htr2c	chrX	protein_coding	5-hydroxytryptamine (serotonin) receptor 2C
chrX	145764601;145770112	145769979;145855381	+	145764601	145855381	cassetteExon	0.5	100	100	ENSMUST00000131999.8	ENSMUSG00000041380.14	Htr2c	chrX	protein_coding	5-hydroxytryptamine (serotonin) receptor 2C
chrX	145952671	145976765	+	145952766	145976765	A5SS	0.5	50	50	ENSMUST00000036303.9	ENSMUSG00000041380.14	Htr2c	chrX	protein_coding	5-hydroxytryptamine (serotonin) receptor 2C
chrX	145952671	145965976	+	145952671	145976765	A3SS	0.5	50	50	ENSMUST00000156697.8	ENSMUSG00000041380.14	Htr2c	chrX	protein_coding	5-hydroxytryptamine (serotonin) receptor 2C
chrX	146275083	146286380	-	146275083;146279828	146279763;146286380	ES	0.33	50	50	ENSMUST00000152838.8	ENSMUSG00000031290.15	Lrch2	chrX	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 2
chrX	146264668;146267800	146267750;146271230	-	146264668	146271230	cassetteExon	0.5	100	100	ENSMUST00000152838.8	ENSMUSG00000031290.15	Lrch2	chrX	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 2
chrX	146279828;146281361	146281284;146286380	-	146279828	146286380	cassetteExon	0.5	100	100	ENSMUST00000152838.8	ENSMUSG00000031290.15	Lrch2	chrX	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 2
chrX	146275083	146286380	-	146275083	146279763	5pMXE	0.5	50	50	ENSMUST00000134265.8	ENSMUSG00000031290.15	Lrch2	chrX	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 2
chrX	146281361	146286380	-	146275083	146286380	A3SS	0.33	50	50	ENSMUST00000137665.2	ENSMUSG00000031290.15	Lrch2	chrX	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 2
chrX	146264668	146271230	-	146267800	146271230	3pMXE	0.5	50	50	ENSMUST00000151730.2	ENSMUSG00000031290.15	Lrch2	chrX	protein_coding	leucine-rich repeats and calponin homology (CH) domain containing 2
chrX	146572739	146589722	+	146549078	146589722	A5SS	0.5	50	50	ENSMUST00000112814.8	ENSMUSG00000095872.8	Gm15128	chrX	protein_coding	predicted gene 15128
chrX	147454302	147463740	+	147446685	147463740	A5SS	0.5	50	50	ENSMUST00000101186.10	ENSMUSG00000096834.8	Gm15127	chrX	protein_coding	predicted gene 15127
chrX	147665663	147686433	+	147640725	147686433	A5SS	0.5	50	50	ENSMUST00000101185.10	ENSMUSG00000079387.11	Luzp4	chrX	protein_coding	leucine zipper protein 4
chrX	147871402	147898082	+	147857369	147898082	A5SS	0.33	50	50	ENSMUST00000179348.8	ENSMUSG00000094885.8	Ott	chrX	protein_coding	ovary testis transcribed
chrX	147881039	147898082	+	147857369	147898082	A5SS	0.33	50	50	ENSMUST00000179348.8	ENSMUSG00000094885.8	Ott	chrX	protein_coding	ovary testis transcribed
chrX	147881039	147898082	+	147871402	147898082	A5SS	0.33	50	50	ENSMUST00000177606.8	ENSMUSG00000094885.8	Ott	chrX	protein_coding	ovary testis transcribed
chrX	148573202	148582583	+	148567560	148582583	A5SS	0.5	50	50	ENSMUST00000101180.8	ENSMUSG00000094378.8	Gm15097	chrX	protein_coding	predicted gene 15097
chrX	149203437	149241958	-	149203437	149223976	5pMXE	0.2	50	50	ENSMUST00000059256.8	ENSMUSG00000041353.13	Tmem29	chrX	protein_coding	transmembrane protein 29
chrX	149203437	149242068	-	149203437	149223976	5pMXE	0.2	50	50	ENSMUST00000059256.8	ENSMUSG00000041353.13	Tmem29	chrX	protein_coding	transmembrane protein 29
chrX	149192596	149203338	-	149181912	149203338	A3SS	0.5	50	50	ENSMUST00000059256.8	ENSMUSG00000041353.13	Tmem29	chrX	protein_coding	transmembrane protein 29
chrX	149221358	149223976	-	149203437	149223976	A3SS	0.5	50	50	ENSMUST00000059256.8	ENSMUSG00000041353.13	Tmem29	chrX	protein_coding	transmembrane protein 29
chrX	149203437	149218366	-	149203437	149223976	A5SS	0.2	50	50	ENSMUST00000059256.8	ENSMUSG00000041353.13	Tmem29	chrX	protein_coding	transmembrane protein 29
chrX	149203437	149223763	-	149203437	149223976	A5SS	0.2	50	50	ENSMUST00000059256.8	ENSMUSG00000041353.13	Tmem29	chrX	protein_coding	transmembrane protein 29
chrX	149203437	149218366	-	149203437	149241958	A5SS	0.2	50	50	ENSMUST00000173996.8	ENSMUSG00000041353.13	Tmem29	chrX	protein_coding	transmembrane protein 29
chrX	149203437	149223763	-	149203437	149241958	A5SS	0.2	50	50	ENSMUST00000173996.8	ENSMUSG00000041353.13	Tmem29	chrX	protein_coding	transmembrane protein 29
chrX	149203437	149242068	-	149203437	149241958	A5SS	0.2	50	50	ENSMUST00000173996.8	ENSMUSG00000041353.13	Tmem29	chrX	protein_coding	transmembrane protein 29
chrX	149203437	149242068	-	149203437	149223763	5pMXE	0.2	50	50	ENSMUST00000163233.2	ENSMUSG00000041353.13	Tmem29	chrX	protein_coding	transmembrane protein 29
chrX	149203437	149218366	-	149203437	149223763	A5SS	0.2	50	50	ENSMUST00000163233.2	ENSMUSG00000041353.13	Tmem29	chrX	protein_coding	transmembrane protein 29
chrX	149203437	149218366	-	149203437	149242068	A5SS	0.2	50	50	ENSMUST00000151067.8	ENSMUSG00000041353.13	Tmem29	chrX	protein_coding	transmembrane protein 29
chrX	149221358	149223672	-	149221358	149223976	A5SS	0.5	50	50	ENSMUST00000127532.2	ENSMUSG00000041353.13	Tmem29	chrX	protein_coding	transmembrane protein 29
chrX	149354759	149372758	-	149371274	149372758	A3SS&ES	0.5	50	50	ENSMUST00000112725.8	ENSMUSG00000025269.17	Apex2	chrX	protein_coding	apurinic/apyrimidinic endonuclease 2
chrX	149355678	149367461	-	149305206	149367461	A3SS	0.5	50	50	ENSMUST00000112725.8	ENSMUSG00000025269.17	Apex2	chrX	protein_coding	apurinic/apyrimidinic endonuclease 2
chrX	149369062	149370039	-	149369041	149370039	A3SS	0.5	50	50	ENSMUST00000112725.8	ENSMUSG00000025269.17	Apex2	chrX	protein_coding	apurinic/apyrimidinic endonuclease 2
chrX	149370122	149370889	-	149370122	149370919	A5SS	0.5	50	50	ENSMUST00000112725.8	ENSMUSG00000025269.17	Apex2	chrX	protein_coding	apurinic/apyrimidinic endonuclease 2
chrX	149335340	149336000	+	149335340	149335955	A3SS	0.5	50	50	ENSMUST00000066337.13	ENSMUSG00000025270.14	Alas2	chrX	protein_coding	aminolevulinic acid synthase 2, erythroid
chrX	149372040	149372792	+	149372040	149372949	A3SS	0.5	50	50	ENSMUST00000153221.8	ENSMUSG00000025271.14	Pfkfb1	chrX	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
chrX	149394095	149395910	+	149394095	149395909	A3SS	0.5	50	50	ENSMUST00000153221.8	ENSMUSG00000025271.14	Pfkfb1	chrX	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
chrX	149405199	149407143	+	149405199	149408153	A3SS	0.5	50	50	ENSMUST00000153221.8	ENSMUSG00000025271.14	Pfkfb1	chrX	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
chrX	149377770	149391582	+	149373080	149391582	A5SS	0.5	50	50	ENSMUST00000153221.8	ENSMUSG00000025271.14	Pfkfb1	chrX	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
chrX	149417623;149419058	149418939;149422577	+	149417623	149422577	cassetteExon	0.5	100	100	ENSMUST00000080884.11	ENSMUSG00000025271.14	Pfkfb1	chrX	protein_coding	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
chrX	149428517	149433430	-	149428517;149432651	149428690;149433430	ES	0.5	50	50	ENSMUST00000112709.8	ENSMUSG00000025272.17	Tro	chrX	protein_coding	trophinin
chrX	149436392	149438880	-	149436392;149438610	149436985;149438880	ES	0.5	50	50	ENSMUST00000112709.8	ENSMUSG00000025272.17	Tro	chrX	protein_coding	trophinin
chrX	149438949	149440539	-	149438949	149440341	5pMXE	0.33	50	50	ENSMUST00000112709.8	ENSMUSG00000025272.17	Tro	chrX	protein_coding	trophinin
chrX	149428517	149432544	-	149428517	149428690	A5SS	0.33	50	50	ENSMUST00000112709.8	ENSMUSG00000025272.17	Tro	chrX	protein_coding	trophinin
chrX	149438949	149440254	-	149438949	149440341	A5SS	0.33	50	50	ENSMUST00000112709.8	ENSMUSG00000025272.17	Tro	chrX	protein_coding	trophinin
chrX	149436392	149440341	-	149436392	149436985	A5SS&ES	0.33	50	50	ENSMUST00000087258.10	ENSMUSG00000025272.17	Tro	chrX	protein_coding	trophinin
chrX	149438949	149440254	-	149438949	149440539	A5SS	0.33	50	50	ENSMUST00000087258.10	ENSMUSG00000025272.17	Tro	chrX	protein_coding	trophinin
chrX	149428517	149433430	-	149428517;149432651	149432544;149433430	ES	0.5	50	50	ENSMUST00000151403.9	ENSMUSG00000025272.17	Tro	chrX	protein_coding	trophinin
chrX	149428517	149428690	-	149428517	149433430	A5SS	0.33	50	50	ENSMUST00000163969.8	ENSMUSG00000025272.17	Tro	chrX	protein_coding	trophinin
chrX	149436392	149440341	-	149436392	149438880	5pMXE	0.33	50	50	ENSMUST00000164071.2	ENSMUSG00000025272.17	Tro	chrX	protein_coding	trophinin
chrX	149438610	149438880	-	149436392	149438880	A3SS	0.5	50	50	ENSMUST00000164071.2	ENSMUSG00000025272.17	Tro	chrX	protein_coding	trophinin
chrX	149436392	149436985	-	149436392	149438880	A5SS	0.33	50	50	ENSMUST00000164071.2	ENSMUSG00000025272.17	Tro	chrX	protein_coding	trophinin
chrX	149428517	149433430	-	149432651	149433430	3pMXE	0.5	50	50	ENSMUST00000169450.8	ENSMUSG00000025272.17	Tro	chrX	protein_coding	trophinin
chrX	149436392;149438949	149438880;149440341	-	149436392	149440341	cassetteExon	0.5	100	100	ENSMUST00000163450.8	ENSMUSG00000025272.17	Tro	chrX	protein_coding	trophinin
chrX	149595310	149595418	-	149595310	149595667	A5SS	0.5	50	50	ENSMUST00000112699.9	ENSMUSG00000025268.16	Maged2	chrX	protein_coding	MAGE family member D2
chrX	149595733	149595817	-	149595733	149597225	A5SS	0.2	50	50	ENSMUST00000112699.9	ENSMUSG00000025268.16	Maged2	chrX	protein_coding	MAGE family member D2
chrX	149595733	149596069	-	149595733	149597225	A5SS	0.2	50	50	ENSMUST00000112699.9	ENSMUSG00000025268.16	Maged2	chrX	protein_coding	MAGE family member D2
chrX	149595733	149596612	-	149595733	149597225	A5SS	0.2	50	50	ENSMUST00000112699.9	ENSMUSG00000025268.16	Maged2	chrX	protein_coding	MAGE family member D2
chrX	149595733	149597198	-	149595733	149597225	A5SS	0.2	50	50	ENSMUST00000112699.9	ENSMUSG00000025268.16	Maged2	chrX	protein_coding	MAGE family member D2
chrX	149595733	149597198	-	149595733	149596612	5pMXE	0.2	50	50	ENSMUST00000112700.8	ENSMUSG00000025268.16	Maged2	chrX	protein_coding	MAGE family member D2
chrX	149595733	149595817	-	149595733	149596612	A5SS	0.2	50	50	ENSMUST00000112700.8	ENSMUSG00000025268.16	Maged2	chrX	protein_coding	MAGE family member D2
chrX	149595733	149596069	-	149595733	149596612	A5SS	0.2	50	50	ENSMUST00000112700.8	ENSMUSG00000025268.16	Maged2	chrX	protein_coding	MAGE family member D2
chrX	149595733	149597198	-	149595733	149596069	5pMXE	0.2	50	50	ENSMUST00000143843.8	ENSMUSG00000025268.16	Maged2	chrX	protein_coding	MAGE family member D2
chrX	149595733	149595817	-	149595733	149596069	A5SS	0.2	50	50	ENSMUST00000143843.8	ENSMUSG00000025268.16	Maged2	chrX	protein_coding	MAGE family member D2
chrX	149595733	149595817	-	149595733	149597198	A5SS	0.2	50	50	ENSMUST00000129768.8	ENSMUSG00000025268.16	Maged2	chrX	protein_coding	MAGE family member D2
chrX	149787281;149795688	149795518;149797017	-	149787281	149797017	cassetteExon	0.5	100	100	ENSMUST00000112691.9	ENSMUSG00000025266.12	Gnl3l	chrX	protein_coding	guanine nucleotide binding protein-like 3 (nucleolar)-like
chrX	149797146	149800197	-	149797085	149800197	A3SS	0.5	50	50	ENSMUST00000112691.9	ENSMUSG00000025266.12	Gnl3l	chrX	protein_coding	guanine nucleotide binding protein-like 3 (nucleolar)-like
chrX	149786637	149787267	-	149786637	149787241	A5SS	0.5	50	50	ENSMUST00000112691.9	ENSMUSG00000025266.12	Gnl3l	chrX	protein_coding	guanine nucleotide binding protein-like 3 (nucleolar)-like
chrX	149797085	149800201	-	149797085	149800197	A5SS	0.5	50	50	ENSMUST00000112691.9	ENSMUSG00000025266.12	Gnl3l	chrX	protein_coding	guanine nucleotide binding protein-like 3 (nucleolar)-like
chrX	149830977	149849177	+	149829196	149849177	A5SS	0.5	50	50	ENSMUST00000112685.8	ENSMUSG00000025265.15	Fgd1	chrX	protein_coding	FYVE, RhoGEF and PH domain containing 1
chrX	149874763	149879425	-	149874763;149879251	149879161;149879425	ES	0.5	50	50	ENSMUST00000112683.9	ENSMUSG00000025264.13	Tsr2	chrX	protein_coding	TSR2 20S rRNA accumulation
chrX	149873410	149873592	-	149873410	149873601	A5SS	0.33	50	50	ENSMUST00000112683.9	ENSMUSG00000025264.13	Tsr2	chrX	protein_coding	TSR2 20S rRNA accumulation
chrX	149873410;149879251	149879161;149879425	-	149873410;149874763	149873601;149879425	MXE	0.5	100	100	ENSMUST00000166010.2	ENSMUSG00000025264.13	Tsr2	chrX	protein_coding	TSR2 20S rRNA accumulation
chrX	149874763	149879161	-	149873410	149879161	A3SS	0.5	50	50	ENSMUST00000166689.2	ENSMUSG00000025264.13	Tsr2	chrX	protein_coding	TSR2 20S rRNA accumulation
chrX	149874763	149879425	-	149879251	149879425	A3SS&ES	0.5	50	50	ENSMUST00000166689.2	ENSMUSG00000025264.13	Tsr2	chrX	protein_coding	TSR2 20S rRNA accumulation
chrX	149873410	149873592	-	149873410	149879161	A5SS	0.33	50	50	ENSMUST00000166689.2	ENSMUSG00000025264.13	Tsr2	chrX	protein_coding	TSR2 20S rRNA accumulation
chrX	149873410	149873601	-	149873410	149879161	A5SS	0.33	50	50	ENSMUST00000166689.2	ENSMUSG00000025264.13	Tsr2	chrX	protein_coding	TSR2 20S rRNA accumulation
chrX	150019723	150019889	+	150019630	150019889	A5SS	0.5	50	50	ENSMUST00000184730.8	ENSMUSG00000041245.14	Wnk3	chrX	protein_coding	WNK lysine deficient protein kinase 3
chrX	150077037	150077418	+	150076896	150077418	A5SS	0.5	50	50	ENSMUST00000184730.8	ENSMUSG00000041245.14	Wnk3	chrX	protein_coding	WNK lysine deficient protein kinase 3
chrX	150098137	150116926	-	150094402	150116926	A3SS	0.5	50	50	ENSMUST00000175942.8	ENSMUSG00000084771.9	A230072E10Rik	chrX	lncRNA	RIKEN cDNA A230072E10 gene
chrX	150117009	150123477	-	150117009	150127148	A5SS	0.5	50	50	ENSMUST00000175942.8	ENSMUSG00000084771.9	A230072E10Rik	chrX	lncRNA	RIKEN cDNA A230072E10 gene
chrX	150304315	150305384	+	150304433	150305384	A5SS	0.5	50	50	ENSMUST00000112666.8	ENSMUSG00000041229.16	Phf8	chrX	protein_coding	PHD finger protein 8
chrX	150353427;150355664	150355362;150356409	+	150353427	150356409	cassetteExon	0.5	100	100	ENSMUST00000112662.9	ENSMUSG00000041229.16	Phf8	chrX	protein_coding	PHD finger protein 8
chrX	150356512	150358632	+	150356512	150380297	A3SS	0.33	50	50	ENSMUST00000112662.9	ENSMUSG00000041229.16	Phf8	chrX	protein_coding	PHD finger protein 8
chrX	150356512	150371880	+	150356512	150380297	A3SS	0.33	50	50	ENSMUST00000112662.9	ENSMUSG00000041229.16	Phf8	chrX	protein_coding	PHD finger protein 8
chrX	150356512	150358632	+	150356512	150371880	A3SS	0.33	50	50	ENSMUST00000112668.9	ENSMUSG00000041229.16	Phf8	chrX	protein_coding	PHD finger protein 8
chrX	150586565	150587442	+	150586565;150586798	150586752;150587442	ES	0.5	50	50	ENSMUST00000139386.2	ENSMUSG00000025261.19	Huwe1	chrX	protein_coding	HECT, UBA and WWE domain containing 1
chrX	150586798	150589268	+	150586798	150587442	3pMXE	0.33	50	50	ENSMUST00000139386.2	ENSMUSG00000025261.19	Huwe1	chrX	protein_coding	HECT, UBA and WWE domain containing 1
chrX	150586798	150589272	+	150586798	150587442	3pMXE	0.33	50	50	ENSMUST00000139386.2	ENSMUSG00000025261.19	Huwe1	chrX	protein_coding	HECT, UBA and WWE domain containing 1
chrX	150584362;150586565	150586172;150589716	+	150584362	150589716	cassetteExon	0.5	100	100	ENSMUST00000152757.8	ENSMUSG00000025261.19	Huwe1	chrX	protein_coding	HECT, UBA and WWE domain containing 1
chrX	150589403	150589716	+	150584362	150589716	A5SS	0.33	50	50	ENSMUST00000152757.8	ENSMUSG00000025261.19	Huwe1	chrX	protein_coding	HECT, UBA and WWE domain containing 1
chrX	150584362	150589716	+	150586565	150589716	5pMXE	0.33	50	50	ENSMUST00000153687.8	ENSMUSG00000025261.19	Huwe1	chrX	protein_coding	HECT, UBA and WWE domain containing 1
chrX	150618288	150623052	+	150618288;150619325	150619218;150623052	ES	0.5	50	50	ENSMUST00000153687.8	ENSMUSG00000025261.19	Huwe1	chrX	protein_coding	HECT, UBA and WWE domain containing 1
chrX	150586565;150589403	150589268;150589716	+	150586565	150589716	cassetteExon	0.5	100	100	ENSMUST00000153687.8	ENSMUSG00000025261.19	Huwe1	chrX	protein_coding	HECT, UBA and WWE domain containing 1
chrX	150640909;150642684	150642451;150643163	+	150640909	150643163	cassetteExon	0.5	100	100	ENSMUST00000153687.8	ENSMUSG00000025261.19	Huwe1	chrX	protein_coding	HECT, UBA and WWE domain containing 1
chrX	150586565	150586752	+	150586565	150589716	A3SS	0.25	50	50	ENSMUST00000153687.8	ENSMUSG00000025261.19	Huwe1	chrX	protein_coding	HECT, UBA and WWE domain containing 1
chrX	150586565	150587442	+	150586565	150589716	A3SS	0.25	50	50	ENSMUST00000153687.8	ENSMUSG00000025261.19	Huwe1	chrX	protein_coding	HECT, UBA and WWE domain containing 1
chrX	150626151	150628420	+	150626151	150633713	A3SS	0.5	50	50	ENSMUST00000153687.8	ENSMUSG00000025261.19	Huwe1	chrX	protein_coding	HECT, UBA and WWE domain containing 1
chrX	150586565	150589268	+	150586565;150587536	150587442;150589268	ES	0.33	50	50	ENSMUST00000149344.8	ENSMUSG00000025261.19	Huwe1	chrX	protein_coding	HECT, UBA and WWE domain containing 1
chrX	150586565;150586798	150586752;150589268	+	150586565;150587536	150587442;150589268	MXE	0.5	100	100	ENSMUST00000149344.8	ENSMUSG00000025261.19	Huwe1	chrX	protein_coding	HECT, UBA and WWE domain containing 1
chrX	150654652	150656673	+	150654652	150657529	A3SS	0.5	50	50	ENSMUST00000026292.15	ENSMUSG00000025261.19	Huwe1	chrX	protein_coding	HECT, UBA and WWE domain containing 1
chrX	150673902	150674063	+	150673902	150674013	A3SS	0.5	50	50	ENSMUST00000026292.15	ENSMUSG00000025261.19	Huwe1	chrX	protein_coding	HECT, UBA and WWE domain containing 1
chrX	150680249	150681443	+	150680249	150681440	A3SS	0.5	50	50	ENSMUST00000026292.15	ENSMUSG00000025261.19	Huwe1	chrX	protein_coding	HECT, UBA and WWE domain containing 1
chrX	150688427	150691727	+	150688427	150689261	A3SS&ES	0.5	50	50	ENSMUST00000026292.15	ENSMUSG00000025261.19	Huwe1	chrX	protein_coding	HECT, UBA and WWE domain containing 1
chrX	150665611	150666075	+	150665725	150666075	A5SS	0.5	50	50	ENSMUST00000026292.15	ENSMUSG00000025261.19	Huwe1	chrX	protein_coding	HECT, UBA and WWE domain containing 1
chrX	150586565;150586798	150586752;150589268	+	150586565	150589268	cassetteExon	0.5	100	100	ENSMUST00000131786.8	ENSMUSG00000025261.19	Huwe1	chrX	protein_coding	HECT, UBA and WWE domain containing 1
chrX	150586565	150587442	+	150586798	150587442	5pMXE	0.5	50	50	ENSMUST00000156616.9	ENSMUSG00000025261.19	Huwe1	chrX	protein_coding	HECT, UBA and WWE domain containing 1
chrX	150586798	150589268	+	150586798;150587536	150587442;150589268	ES	0.5	50	50	ENSMUST00000156616.9	ENSMUSG00000025261.19	Huwe1	chrX	protein_coding	HECT, UBA and WWE domain containing 1
chrX	150586798	150589268	+	150586798	150589272	A3SS	0.33	50	50	ENSMUST00000138566.8	ENSMUSG00000025261.19	Huwe1	chrX	protein_coding	HECT, UBA and WWE domain containing 1
chrX	150586565	150589268	+	150586798	150589268	5pMXE	0.33	50	50	ENSMUST00000147666.8	ENSMUSG00000025261.19	Huwe1	chrX	protein_coding	HECT, UBA and WWE domain containing 1
chrX	150786521	150786619	+	150786521	150786649	A3SS	0.5	50	50	ENSMUST00000026289.10	ENSMUSG00000025260.11	Hsd17b10	chrX	protein_coding	hydroxysteroid (17-beta) dehydrogenase 10
chrX	150792637	150799120	-	150792637	150798777	A5SS&ES	0.5	50	50	ENSMUST00000026288.5	ENSMUSG00000025257.6	Ribc1	chrX	protein_coding	RIB43A domain with coiled-coils 1
chrX	150799636;150806147	150805742;150809234	+	150799636	150809234	cassetteExon	0.5	100	100	ENSMUST00000145518.8	ENSMUSG00000041133.12	Smc1a	chrX	protein_coding	structural maintenance of chromosomes 1A
chrX	151004816	151005918	+	151004816;151005328	151005279;151005918	ES	0.5	50	50	ENSMUST00000168786.8	ENSMUSG00000041115.17	Iqsec2	chrX	protein_coding	IQ motif and Sec7 domain 2
chrX	150962086	150985904	+	150949959	150985904	A5SS	0.33	50	50	ENSMUST00000168786.8	ENSMUSG00000041115.17	Iqsec2	chrX	protein_coding	IQ motif and Sec7 domain 2
chrX	150964088	150985904	+	150949959	150985904	A5SS	0.33	50	50	ENSMUST00000168786.8	ENSMUSG00000041115.17	Iqsec2	chrX	protein_coding	IQ motif and Sec7 domain 2
chrX	150999462	151001873	+	150999435	151001873	A5SS	0.5	50	50	ENSMUST00000168786.8	ENSMUSG00000041115.17	Iqsec2	chrX	protein_coding	IQ motif and Sec7 domain 2
chrX	150962086	150976862	+	150962086;150964088	150963993;150976862	ES	0.5	50	50	ENSMUST00000146835.8	ENSMUSG00000041115.17	Iqsec2	chrX	protein_coding	IQ motif and Sec7 domain 2
chrX	150964088	150985904	+	150964088	150976862	3pMXE	0.5	50	50	ENSMUST00000146835.8	ENSMUSG00000041115.17	Iqsec2	chrX	protein_coding	IQ motif and Sec7 domain 2
chrX	150962086	150985904	+	150962086	150976862	3pMXE	0.33	50	50	ENSMUST00000128724.8	ENSMUSG00000041115.17	Iqsec2	chrX	protein_coding	IQ motif and Sec7 domain 2
chrX	150962086;150964088	150963993;150985904	+	150962086	150985904	cassetteExon	0.5	100	100	ENSMUST00000153356.2	ENSMUSG00000041115.17	Iqsec2	chrX	protein_coding	IQ motif and Sec7 domain 2
chrX	150962086	150976862	+	150962086	150963993	A3SS&ES	0.33	50	50	ENSMUST00000096275.5	ENSMUSG00000041115.17	Iqsec2	chrX	protein_coding	IQ motif and Sec7 domain 2
chrX	151020706	151023022	+	151020706;151022748	151022626;151023022	ES	0.5	50	50	ENSMUST00000112584.8	ENSMUSG00000025332.15	Kdm5c	chrX	protein_coding	lysine (K)-specific demethylase 5C
chrX	151053527	151054008	+	151053527;151053827	151053690;151054008	ES	0.5	50	50	ENSMUST00000112584.8	ENSMUSG00000025332.15	Kdm5c	chrX	protein_coding	lysine (K)-specific demethylase 5C
chrX	151054925	151055071	+	151054934	151055071	A5SS	0.5	50	50	ENSMUST00000112584.8	ENSMUSG00000025332.15	Kdm5c	chrX	protein_coding	lysine (K)-specific demethylase 5C
chrX	151081870;151103280	151103206;151110157	-	151081870	151110157	cassetteExon	0.5	100	100	ENSMUST00000195280.3	ENSMUSG00000087403.10	Kantr	chrX	protein_coding	Kdm5c adjacent non-coding transcript
chrX	151081883	151110157	-	151081870	151110157	A3SS	0.33	50	50	ENSMUST00000195280.3	ENSMUSG00000087403.10	Kantr	chrX	protein_coding	Kdm5c adjacent non-coding transcript
chrX	151110235	151110362	-	151110235	151110406	A5SS	0.5	50	50	ENSMUST00000195280.3	ENSMUSG00000087403.10	Kantr	chrX	protein_coding	Kdm5c adjacent non-coding transcript
chrX	151103280	151110157	-	151081883	151110157	A3SS	0.33	50	50	ENSMUST00000149098.8	ENSMUSG00000087403.10	Kantr	chrX	protein_coding	Kdm5c adjacent non-coding transcript
chrX	151098415	151103206	-	151081870	151103206	A3SS	0.5	50	50	ENSMUST00000181635.8	ENSMUSG00000087403.10	Kantr	chrX	protein_coding	Kdm5c adjacent non-coding transcript
chrX	151098415	151100351	-	151098415	151103206	A5SS	0.5	50	50	ENSMUST00000141922.8	ENSMUSG00000087403.10	Kantr	chrX	protein_coding	Kdm5c adjacent non-coding transcript
chrX	151081870	151110157	-	151103280	151110157	3pMXE	0.33	50	50	ENSMUST00000154085.2	ENSMUSG00000087403.10	Kantr	chrX	protein_coding	Kdm5c adjacent non-coding transcript
chrX	151122391	151122629	-	151122388	151122629	A3SS	0.5	50	50	ENSMUST00000149685.8	ENSMUSG00000041096.14	Tspyl2	chrX	protein_coding	TSPY-like 2
chrX	151123389	151124536	-	151123376	151124536	A3SS	0.5	50	50	ENSMUST00000149685.8	ENSMUSG00000041096.14	Tspyl2	chrX	protein_coding	TSPY-like 2
chrX	151150265	151150417	-	151130704	151150417	A3SS	0.5	50	50	ENSMUST00000070316.12	ENSMUSG00000056679.14	Gpr173	chrX	protein_coding	G-protein coupled receptor 173
chrX	151153018;151168748	151168641;151199287	+	151153018;151186473	151186309;151199287	MXE	0.5	100	100	ENSMUST00000130625.8	ENSMUSG00000084885.8	3010001F23Rik	chrX	lncRNA	RIKEN cDNA 3010001F23 gene
chrX	151153018	151165455	+	151153018	151186309	A3SS	0.33	50	50	ENSMUST00000130625.8	ENSMUSG00000084885.8	3010001F23Rik	chrX	lncRNA	RIKEN cDNA 3010001F23 gene
chrX	151152112	151152838	+	151151690	151152838	A5SS	0.5	50	50	ENSMUST00000130625.8	ENSMUSG00000084885.8	3010001F23Rik	chrX	lncRNA	RIKEN cDNA 3010001F23 gene
chrX	151185736	151186309	+	151153018	151186309	A5SS	0.5	50	50	ENSMUST00000130625.8	ENSMUSG00000084885.8	3010001F23Rik	chrX	lncRNA	RIKEN cDNA 3010001F23 gene
chrX	151168748	151199287	+	151168748	151185964	3pMXE	0.5	50	50	ENSMUST00000148651.8	ENSMUSG00000084885.8	3010001F23Rik	chrX	lncRNA	RIKEN cDNA 3010001F23 gene
chrX	151153018;151165526	151165455;151168641	+	151153018	151168641	cassetteExon	0.5	100	100	ENSMUST00000148651.8	ENSMUSG00000084885.8	3010001F23Rik	chrX	lncRNA	RIKEN cDNA 3010001F23 gene
chrX	151153018;151186473	151186309;151199287	+	151153018;151168748	151165455;151199287	MXE	0.5	100	100	ENSMUST00000145515.8	ENSMUSG00000084885.8	3010001F23Rik	chrX	lncRNA	RIKEN cDNA 3010001F23 gene
chrX	151153018	151186309	+	151153018	151168641	3pMXE	0.33	50	50	ENSMUST00000137460.2	ENSMUSG00000084885.8	3010001F23Rik	chrX	lncRNA	RIKEN cDNA 3010001F23 gene
chrX	151400449	151401897	-	151400351	151401897	A3SS	0.5	50	50	ENSMUST00000101141.9	ENSMUSG00000045180.14	Shroom2	chrX	protein_coding	shroom family member 2
chrX	151402635	151406122	-	151402442	151406122	A3SS	0.5	50	50	ENSMUST00000101141.9	ENSMUSG00000045180.14	Shroom2	chrX	protein_coding	shroom family member 2
chrX	151406313	151440420	-	151406331	151440420	A3SS	0.5	50	50	ENSMUST00000101141.9	ENSMUSG00000045180.14	Shroom2	chrX	protein_coding	shroom family member 2
chrX	151402442	151406032	-	151402442	151406122	A5SS	0.5	50	50	ENSMUST00000101141.9	ENSMUSG00000045180.14	Shroom2	chrX	protein_coding	shroom family member 2
chrX	151406331	151426809	-	151406331	151440420	A5SS	0.33	50	50	ENSMUST00000101141.9	ENSMUSG00000045180.14	Shroom2	chrX	protein_coding	shroom family member 2
chrX	151406331	151427390	-	151406331	151440420	A5SS	0.33	50	50	ENSMUST00000101141.9	ENSMUSG00000045180.14	Shroom2	chrX	protein_coding	shroom family member 2
chrX	151444714	151456189	-	151444714	151456528	A5SS	0.5	50	50	ENSMUST00000101141.9	ENSMUSG00000045180.14	Shroom2	chrX	protein_coding	shroom family member 2
chrX	151406331	151426809	-	151406331	151427390	A5SS	0.33	50	50	ENSMUST00000137217.8	ENSMUSG00000045180.14	Shroom2	chrX	protein_coding	shroom family member 2
chrX	151406313	151426809	-	151406313	151440420	A5SS	0.5	50	50	ENSMUST00000062317.5	ENSMUSG00000045180.14	Shroom2	chrX	protein_coding	shroom family member 2
chrX	151406331	151426809	-	151406313	151426809	A3SS	0.5	50	50	ENSMUST00000124141.2	ENSMUSG00000045180.14	Shroom2	chrX	protein_coding	shroom family member 2
chrX	151568148;151569216	151569122;151573480	+	151568148	151573480	cassetteExon	0.5	100	100	ENSMUST00000151819.8	ENSMUSG00000025333.11	Gpr143	chrX	protein_coding	G protein-coupled receptor 143
chrX	151927071	151933358	+	151927071;151931531	151931448;151933358	ES	0.5	50	50	ENSMUST00000039720.11	ENSMUSG00000041658.13	Rragb	chrX	protein_coding	Ras-related GTP binding B
chrX	152021088;152091920	152091848;152153841	+	152021088	152153841	cassetteExon	0.5	100	100	ENSMUST00000143880.2	ENSMUSG00000041649.14	Klf8	chrX	protein_coding	Kruppel-like factor 8
chrX	152143479	152153841	+	152021088	152153841	A5SS	0.33	50	50	ENSMUST00000143880.2	ENSMUSG00000041649.14	Klf8	chrX	protein_coding	Kruppel-like factor 8
chrX	152143479	152153841	+	152091920	152153841	A5SS	0.33	50	50	ENSMUST00000112574.9	ENSMUSG00000041649.14	Klf8	chrX	protein_coding	Kruppel-like factor 8
chrX	152341878	152342050	+	152341878	152342041	A3SS	0.5	50	50	ENSMUST00000112573.8	ENSMUSG00000048573.10	Cypt3	chrX	protein_coding	cysteine-rich perinuclear theca 3
chrX	152472693	152479081	-	152472693;152478674	152478620;152479081	ES	0.5	50	50	ENSMUST00000039424.14	ENSMUSG00000041633.15	Kctd12b	chrX	protein_coding	potassium channel tetramerisation domain containing 12b
chrX	152508837	152524036	+	152508837;152511935	152511858;152524036	ES	0.5	50	50	ENSMUST00000140575.8	ENSMUSG00000086316.9	Nbdy	chrX	protein_coding	negative regulator of P-body association
chrX	152508837;152510028	152509939;152511858	+	152508837	152511858	cassetteExon	0.5	100	100	ENSMUST00000140575.8	ENSMUSG00000086316.9	Nbdy	chrX	protein_coding	negative regulator of P-body association
chrX	152507121	152508701	+	152506933	152508701	A5SS	0.5	50	50	ENSMUST00000140575.8	ENSMUSG00000086316.9	Nbdy	chrX	protein_coding	negative regulator of P-body association
chrX	152508837	152509939	+	152508837	152524036	A3SS	0.33	50	50	ENSMUST00000185492.7	ENSMUSG00000086316.9	Nbdy	chrX	protein_coding	negative regulator of P-body association
chrX	152508837	152524036	+	152508837	152511858	3pMXE	0.33	50	50	ENSMUST00000149514.8	ENSMUSG00000086316.9	Nbdy	chrX	protein_coding	negative regulator of P-body association
chrX	152615325;152615544	152615431;152616187	+	152615325	152616187	cassetteExon	0.5	100	100	ENSMUST00000148708.2	ENSMUSG00000046550.9	Spin2c	chrX	protein_coding	spindlin family, member 2C
chrX	152615325	152616187	+	152615544	152616187	A5SS	0.5	50	50	ENSMUST00000049999.9	ENSMUSG00000046550.9	Spin2c	chrX	protein_coding	spindlin family, member 2C
chrX	153812672	153876618	-	153812672	153815452	5pMXE	0.5	50	50	ENSMUST00000112559.8	ENSMUSG00000055746.10	Magea2	chrX	protein_coding	MAGE family member A2
chrX	153997130;153998226	153998116;153998597	-	153997130	153998597	cassetteExon	0.5	100	100	ENSMUST00000026318.15	ENSMUSG00000025283.16	Sat1	chrX	protein_coding	spermidine/spermine N1-acetyl transferase 1
chrX	153997130;153998226	153998117;153998597	-	153997130	153998597	cassetteExon	0.5	100	100	ENSMUST00000026318.15	ENSMUSG00000025283.16	Sat1	chrX	protein_coding	spermidine/spermine N1-acetyl transferase 1
chrX	153996954	153997029	-	153996933	153997029	A3SS	0.5	50	50	ENSMUST00000026318.15	ENSMUSG00000025283.16	Sat1	chrX	protein_coding	spermidine/spermine N1-acetyl transferase 1
chrX	153997130	153998117	-	153997130	153998116	A5SS	0.33	50	50	ENSMUST00000150046.2	ENSMUSG00000025283.16	Sat1	chrX	protein_coding	spermidine/spermine N1-acetyl transferase 1
chrX	153997130	153998597	-	153997130	153998116	A5SS	0.33	50	50	ENSMUST00000150046.2	ENSMUSG00000025283.16	Sat1	chrX	protein_coding	spermidine/spermine N1-acetyl transferase 1
chrX	154045670	154047032	+	154045670	154046364	3pMXE	0.33	50	50	ENSMUST00000134662.2	ENSMUSG00000025287.16	Acot9	chrX	protein_coding	acyl-CoA thioesterase 9
chrX	154045670	154052655	+	154045670	154046364	3pMXE	0.33	50	50	ENSMUST00000134662.2	ENSMUSG00000025287.16	Acot9	chrX	protein_coding	acyl-CoA thioesterase 9
chrX	154045670;154047089	154047032;154052655	+	154045670	154052655	cassetteExon	0.5	100	100	ENSMUST00000026324.10	ENSMUSG00000025287.16	Acot9	chrX	protein_coding	acyl-CoA thioesterase 9
chrX	154117951	154123305	-	154117951	154121109	5pMXE	0.5	50	50	ENSMUST00000026328.11	ENSMUSG00000025289.16	Prdx4	chrX	protein_coding	peroxiredoxin 4
chrX	154120450	154121109	-	154117951	154121109	A3SS	0.5	50	50	ENSMUST00000026328.11	ENSMUSG00000025289.16	Prdx4	chrX	protein_coding	peroxiredoxin 4
chrX	154358191	154405956	-	154358191;154370027	154369367;154405956	ES	0.33	50	50	ENSMUST00000038665.6	ENSMUSG00000041552.8	Ptchd1	chrX	protein_coding	patched domain containing 1
chrX	154370027;154405480	154405316;154405956	-	154370027	154405956	cassetteExon	0.5	100	100	ENSMUST00000038665.6	ENSMUSG00000041552.8	Ptchd1	chrX	protein_coding	patched domain containing 1
chrX	154370027	154405956	-	154358191	154405956	A3SS	0.33	50	50	ENSMUST00000170236.2	ENSMUSG00000041552.8	Ptchd1	chrX	protein_coding	patched domain containing 1
chrX	154405480	154405956	-	154358191	154405956	A3SS	0.33	50	50	ENSMUST00000170236.2	ENSMUSG00000041552.8	Ptchd1	chrX	protein_coding	patched domain containing 1
chrX	154358191	154369367	-	154358191	154405956	A5SS	0.5	50	50	ENSMUST00000170236.2	ENSMUSG00000041552.8	Ptchd1	chrX	protein_coding	patched domain containing 1
chrX	154407911	154519380	+	154407911	154664231	A3SS	0.5	50	50	ENSMUST00000112542.2	ENSMUSG00000055109.6	Gm15155	chrX	protein_coding	predicted gene 15155
chrX	156237909	156243323	-	156237909;156239104	156238990;156243323	ES	0.5	50	50	ENSMUST00000112529.8	ENSMUSG00000071708.12	Sms	chrX	protein_coding	spermine synthase
chrX	156253104	156274288	-	156253104	156274901	A5SS	0.5	50	50	ENSMUST00000112529.8	ENSMUSG00000071708.12	Sms	chrX	protein_coding	spermine synthase
chrX	156237909	156243323	-	156239104	156243323	3pMXE	0.5	50	50	ENSMUST00000146026.2	ENSMUSG00000071708.12	Sms	chrX	protein_coding	spermine synthase
chrX	156374551	156381492	-	156374551;156376869	156376721;156381492	ES	0.5	50	50	ENSMUST00000058098.15	ENSMUSG00000046873.19	Mbtps2	chrX	protein_coding	membrane-bound transcription factor peptidase, site 2
chrX	156352094	156355855	-	156344497	156355855	A3SS	0.5	50	50	ENSMUST00000058098.15	ENSMUSG00000046873.19	Mbtps2	chrX	protein_coding	membrane-bound transcription factor peptidase, site 2
chrX	156344497	156351137	-	156344497	156355855	A5SS	0.5	50	50	ENSMUST00000058098.15	ENSMUSG00000046873.19	Mbtps2	chrX	protein_coding	membrane-bound transcription factor peptidase, site 2
chrX	156359183	156362665	-	156359183	156374350	A5SS	0.5	50	50	ENSMUST00000058098.15	ENSMUSG00000046873.19	Mbtps2	chrX	protein_coding	membrane-bound transcription factor peptidase, site 2
chrX	156482309	156485952	+	156482309;156485571	156485448;156485952	ES	0.33	50	50	ENSMUST00000136141.2	ENSMUSG00000041476.13	Smpx	chrX	protein_coding	small muscle protein, X-linked
chrX	156485733	156485952	+	156485571	156485952	A5SS	0.33	50	50	ENSMUST00000136141.2	ENSMUSG00000041476.13	Smpx	chrX	protein_coding	small muscle protein, X-linked
chrX	156504075	156535168	+	156504075;156534625	156534591;156535168	ES	0.5	50	50	ENSMUST00000038007.10	ENSMUSG00000041476.13	Smpx	chrX	protein_coding	small muscle protein, X-linked
chrX	156482309;156485733	156485448;156485952	+	156482309	156485952	cassetteExon	0.5	100	100	ENSMUST00000038007.10	ENSMUSG00000041476.13	Smpx	chrX	protein_coding	small muscle protein, X-linked
chrX	156486008;156489969	156489930;156497583	+	156486008	156497583	cassetteExon	0.5	100	100	ENSMUST00000038007.10	ENSMUSG00000041476.13	Smpx	chrX	protein_coding	small muscle protein, X-linked
chrX	156482309	156485952	+	156485733	156485952	5pMXE	0.33	50	50	ENSMUST00000112520.2	ENSMUSG00000041476.13	Smpx	chrX	protein_coding	small muscle protein, X-linked
chrX	156570371	156580473	-	156542214	156580473	A3SS	0.5	50	50	ENSMUST00000130794.2	ENSMUSG00000086188.2	Gm15169	chrX	lncRNA	predicted gene 15169
chrX	156617069	156636091	-	156609549	156636091	A3SS	0.5	50	50	ENSMUST00000026750.15	ENSMUSG00000025658.17	Cnksr2	chrX	protein_coding	connector enhancer of kinase suppressor of Ras 2
chrX	158039184	158061106	+	157994720	158061106	A5SS	0.5	50	50	ENSMUST00000112493.8	ENSMUSG00000031309.16	Rps6ka3	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 3
chrX	158039184	158062163	+	158061199	158062163	A5SS&ES	0.33	50	50	ENSMUST00000112493.8	ENSMUSG00000031309.16	Rps6ka3	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 3
chrX	158039184	158068262	+	158062199	158068262	A5SS&ES	0.5	50	50	ENSMUST00000112493.8	ENSMUSG00000031309.16	Rps6ka3	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 3
chrX	158039184	158094460	+	158068318	158094460	A5SS&ES	0.33	50	50	ENSMUST00000112493.8	ENSMUSG00000031309.16	Rps6ka3	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 3
chrX	158059332	158062163	+	158061199	158062163	A5SS&ES	0.33	50	50	ENSMUST00000112493.8	ENSMUSG00000031309.16	Rps6ka3	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 3
chrX	158086396	158094460	+	158068318	158094460	A5SS	0.33	50	50	ENSMUST00000112493.8	ENSMUSG00000031309.16	Rps6ka3	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 3
chrX	158145414	158145638	+	158135429	158145638	A5SS	0.5	50	50	ENSMUST00000112493.8	ENSMUSG00000031309.16	Rps6ka3	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 3
chrX	158039184	158062163	+	158039184;158061199	158061106;158062163	ES	0.33	50	50	ENSMUST00000126686.8	ENSMUSG00000031309.16	Rps6ka3	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 3
chrX	158039184	158094460	+	158039184;158068318	158068262;158094460	ES	0.33	50	50	ENSMUST00000033671.13	ENSMUSG00000031309.16	Rps6ka3	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 3
chrX	158039184;158062199	158062163;158068262	+	158039184	158068262	cassetteExon	0.5	100	100	ENSMUST00000033671.13	ENSMUSG00000031309.16	Rps6ka3	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 3
chrX	158039184	158061106	+	158039184	158068262	A3SS	0.25	50	50	ENSMUST00000033671.13	ENSMUSG00000031309.16	Rps6ka3	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 3
chrX	158059332	158062163	+	158039184	158062163	A5SS	0.33	50	50	ENSMUST00000112492.8	ENSMUSG00000031309.16	Rps6ka3	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 3
chrX	158039184	158061106	+	158039184	158094460	A3SS	0.25	50	50	ENSMUST00000148570.8	ENSMUSG00000031309.16	Rps6ka3	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 3
chrX	158039184	158062163	+	158039184	158094460	A3SS	0.25	50	50	ENSMUST00000148570.8	ENSMUSG00000031309.16	Rps6ka3	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 3
chrX	158086396	158094460	+	158039184	158094460	A5SS	0.33	50	50	ENSMUST00000148570.8	ENSMUSG00000031309.16	Rps6ka3	chrX	protein_coding	ribosomal protein S6 kinase polypeptide 3
chrX	158242479	158245110	+	158242479;158243361	158243263;158245110	ES	0.5	50	50	ENSMUST00000112471.9	ENSMUSG00000041020.15	Map7d2	chrX	protein_coding	MAP7 domain containing 2
chrX	158266082	158269422	+	158266082	158272273	A3SS	0.5	50	50	ENSMUST00000112471.9	ENSMUSG00000041020.15	Map7d2	chrX	protein_coding	MAP7 domain containing 2
chrX	158242479	158252959	+	158242479;158245220	158245110;158252959	ES	0.5	50	50	ENSMUST00000145142.8	ENSMUSG00000041020.15	Map7d2	chrX	protein_coding	MAP7 domain containing 2
chrX	158242479	158243263	+	158242479	158252959	A3SS	0.33	50	50	ENSMUST00000156172.3	ENSMUSG00000041020.15	Map7d2	chrX	protein_coding	MAP7 domain containing 2
chrX	158315831	158331235	+	158310200	158331235	A5SS	0.33	50	50	ENSMUST00000144598.8	ENSMUSG00000044150.13	Bclaf3	chrX	protein_coding	Bclaf1 and Thrap3 family member 3
chrX	158324943	158331235	+	158310200	158331235	A5SS	0.33	50	50	ENSMUST00000144598.8	ENSMUSG00000044150.13	Bclaf3	chrX	protein_coding	Bclaf1 and Thrap3 family member 3
chrX	158342949	158350915	+	158342949;158349538	158349424;158350915	ES	0.33	50	50	ENSMUST00000112464.8	ENSMUSG00000044150.13	Bclaf3	chrX	protein_coding	Bclaf1 and Thrap3 family member 3
chrX	158324943	158331235	+	158315831	158331235	A5SS	0.33	50	50	ENSMUST00000112464.8	ENSMUSG00000044150.13	Bclaf3	chrX	protein_coding	Bclaf1 and Thrap3 family member 3
chrX	158350361	158350915	+	158349538	158350915	A5SS	0.33	50	50	ENSMUST00000112464.8	ENSMUSG00000044150.13	Bclaf3	chrX	protein_coding	Bclaf1 and Thrap3 family member 3
chrX	158350361	158350915	+	158342949	158350915	A5SS	0.33	50	50	ENSMUST00000057180.13	ENSMUSG00000044150.13	Bclaf3	chrX	protein_coding	Bclaf1 and Thrap3 family member 3
chrX	158741318	158749210	+	158741318;158744889	158744761;158749210	ES	0.5	50	50	ENSMUST00000112456.9	ENSMUSG00000040990.18	Sh3kbp1	chrX	protein_coding	SH3-domain kinase binding protein 1
chrX	158726278;158727193	158727062;158741209	+	158726278	158741209	cassetteExon	0.5	100	100	ENSMUST00000112456.9	ENSMUSG00000040990.18	Sh3kbp1	chrX	protein_coding	SH3-domain kinase binding protein 1
chrX	158599702	158600238	+	158599702	158611370	A3SS	0.5	50	50	ENSMUST00000112456.9	ENSMUSG00000040990.18	Sh3kbp1	chrX	protein_coding	SH3-domain kinase binding protein 1
chrX	158480470	158547008	+	158466697	158547008	A5SS	0.33	50	50	ENSMUST00000112456.9	ENSMUSG00000040990.18	Sh3kbp1	chrX	protein_coding	SH3-domain kinase binding protein 1
chrX	158491739	158547008	+	158466697	158547008	A5SS	0.33	50	50	ENSMUST00000112456.9	ENSMUSG00000040990.18	Sh3kbp1	chrX	protein_coding	SH3-domain kinase binding protein 1
chrX	158607545	158611370	+	158599702	158611370	A5SS	0.5	50	50	ENSMUST00000112456.9	ENSMUSG00000040990.18	Sh3kbp1	chrX	protein_coding	SH3-domain kinase binding protein 1
chrX	158623607	158648321	+	158611575	158648321	A5SS	0.33	50	50	ENSMUST00000112456.9	ENSMUSG00000040990.18	Sh3kbp1	chrX	protein_coding	SH3-domain kinase binding protein 1
chrX	158624182	158648321	+	158611575	158648321	A5SS	0.33	50	50	ENSMUST00000112456.9	ENSMUSG00000040990.18	Sh3kbp1	chrX	protein_coding	SH3-domain kinase binding protein 1
chrX	158724870	158726193	+	158702913	158726193	A5SS	0.33	50	50	ENSMUST00000112456.9	ENSMUSG00000040990.18	Sh3kbp1	chrX	protein_coding	SH3-domain kinase binding protein 1
chrX	158726084	158726193	+	158702913	158726193	A5SS	0.33	50	50	ENSMUST00000112456.9	ENSMUSG00000040990.18	Sh3kbp1	chrX	protein_coding	SH3-domain kinase binding protein 1
chrX	158491739	158547008	+	158480470	158547008	A5SS	0.33	50	50	ENSMUST00000123433.8	ENSMUSG00000040990.18	Sh3kbp1	chrX	protein_coding	SH3-domain kinase binding protein 1
chrX	158623607;158624182	158624072;158648321	+	158623607	158648321	cassetteExon	0.5	100	100	ENSMUST00000112451.8	ENSMUSG00000040990.18	Sh3kbp1	chrX	protein_coding	SH3-domain kinase binding protein 1
chrX	158623607	158648321	+	158624182	158648321	5pMXE	0.33	50	50	ENSMUST00000112447.8	ENSMUSG00000040990.18	Sh3kbp1	chrX	protein_coding	SH3-domain kinase binding protein 1
chrX	158726084	158726193	+	158724870	158726193	A5SS	0.33	50	50	ENSMUST00000134062.8	ENSMUSG00000040990.18	Sh3kbp1	chrX	protein_coding	SH3-domain kinase binding protein 1
chrX	158920248	158921252	-	158916228	158921252	A3SS	0.5	50	50	ENSMUST00000033662.9	ENSMUSG00000031299.11	Pdha1	chrX	protein_coding	pyruvate dehydrogenase E1 alpha 1
chrX	159239033	159244339	+	159239033;159241869	159241831;159244339	ES	0.25	50	50	ENSMUST00000112408.9	ENSMUSG00000031298.16	Adgrg2	chrX	protein_coding	adhesion G protein-coupled receptor G2
chrX	159244377	159248574	+	159244377;159246365	159246324;159248574	ES	0.5	50	50	ENSMUST00000112408.9	ENSMUSG00000031298.16	Adgrg2	chrX	protein_coding	adhesion G protein-coupled receptor G2
chrX	159274495	159279301	+	159274495;159275748	159275596;159279301	ES	0.5	50	50	ENSMUST00000112408.9	ENSMUSG00000031298.16	Adgrg2	chrX	protein_coding	adhesion G protein-coupled receptor G2
chrX	159213390;159217898	159217769;159221191	+	159213390	159221191	cassetteExon	0.5	100	100	ENSMUST00000112408.9	ENSMUSG00000031298.16	Adgrg2	chrX	protein_coding	adhesion G protein-coupled receptor G2
chrX	159210412	159213346	+	159173745	159213346	A5SS	0.5	50	50	ENSMUST00000112408.9	ENSMUSG00000031298.16	Adgrg2	chrX	protein_coding	adhesion G protein-coupled receptor G2
chrX	159241878	159244339	+	159241869	159244339	A5SS	0.25	50	50	ENSMUST00000112408.9	ENSMUSG00000031298.16	Adgrg2	chrX	protein_coding	adhesion G protein-coupled receptor G2
chrX	159239033	159244339	+	159239033;159241878	159241831;159244339	ES	0.25	50	50	ENSMUST00000112402.8	ENSMUSG00000031298.16	Adgrg2	chrX	protein_coding	adhesion G protein-coupled receptor G2
chrX	159221309	159244339	+	159221309;159239033	159239001;159244339	ES	0.25	50	50	ENSMUST00000112405.9	ENSMUSG00000031298.16	Adgrg2	chrX	protein_coding	adhesion G protein-coupled receptor G2
chrX	159241869	159244339	+	159221309	159244339	A5SS	0.25	50	50	ENSMUST00000112404.9	ENSMUSG00000031298.16	Adgrg2	chrX	protein_coding	adhesion G protein-coupled receptor G2
chrX	159241878	159244339	+	159221309	159244339	A5SS	0.25	50	50	ENSMUST00000112404.9	ENSMUSG00000031298.16	Adgrg2	chrX	protein_coding	adhesion G protein-coupled receptor G2
chrX	159310773	159312911	+	159310773;159312011	159311843;159312911	ES	0.5	50	50	ENSMUST00000112377.8	ENSMUSG00000031295.14	Phka2	chrX	protein_coding	phosphorylase kinase alpha 2
chrX	159314184	159324365	+	159314184;159316073	159315975;159324365	ES	0.5	50	50	ENSMUST00000112377.8	ENSMUSG00000031295.14	Phka2	chrX	protein_coding	phosphorylase kinase alpha 2
chrX	159341572	159343096	+	159341572;159342871	159342727;159343096	ES	0.5	50	50	ENSMUST00000112377.8	ENSMUSG00000031295.14	Phka2	chrX	protein_coding	phosphorylase kinase alpha 2
chrX	159373364	159381464	+	159373364	159373935	3pMXE	0.5	50	50	ENSMUST00000112377.8	ENSMUSG00000031295.14	Phka2	chrX	protein_coding	phosphorylase kinase alpha 2
chrX	159285288	159285749	+	159285288	159285743	A3SS	0.5	50	50	ENSMUST00000112377.8	ENSMUSG00000031295.14	Phka2	chrX	protein_coding	phosphorylase kinase alpha 2
chrX	159372014	159373162	+	159372014	159373164	A3SS	0.5	50	50	ENSMUST00000112377.8	ENSMUSG00000031295.14	Phka2	chrX	protein_coding	phosphorylase kinase alpha 2
chrX	159369950	159371961	+	159369945	159371961	A5SS	0.5	50	50	ENSMUST00000112377.8	ENSMUSG00000031295.14	Phka2	chrX	protein_coding	phosphorylase kinase alpha 2
chrX	159310773	159312911	+	159310773	159311843	3pMXE	0.5	50	50	ENSMUST00000146752.8	ENSMUSG00000031295.14	Phka2	chrX	protein_coding	phosphorylase kinase alpha 2
chrX	159476610;159501336	159501259;159502803	-	159476610	159502803	cassetteExon	0.5	100	100	ENSMUST00000071204.12	ENSMUSG00000062168.13	Ppef1	chrX	protein_coding	protein phosphatase with EF hand calcium-binding domain 1
chrX	159474552	159476483	-	159474552	159518432	A5SS	0.5	50	50	ENSMUST00000135856.2	ENSMUSG00000062168.13	Ppef1	chrX	protein_coding	protein phosphatase with EF hand calcium-binding domain 1
chrX	159551233	159562354	+	159551233	159573770	A3SS	0.5	50	50	ENSMUST00000112368.3	ENSMUSG00000031293.14	Rs1	chrX	protein_coding	retinoschisis (X-linked, juvenile) 1 (human)
chrX	159564906	159573770	+	159551233	159573770	A5SS	0.5	50	50	ENSMUST00000112368.3	ENSMUSG00000031293.14	Rs1	chrX	protein_coding	retinoschisis (X-linked, juvenile) 1 (human)
chrX	159556617	159594593	-	159556617;159591687	159591471;159594593	ES	0.5	50	50	ENSMUST00000196297.5	ENSMUSG00000031292.15	Cdkl5	chrX	protein_coding	cyclin-dependent kinase-like 5
chrX	159567578	159591471	-	159556617	159591471	A3SS	0.33	50	50	ENSMUST00000196297.5	ENSMUSG00000031292.15	Cdkl5	chrX	protein_coding	cyclin-dependent kinase-like 5
chrX	159582247	159591471	-	159556617	159591471	A3SS	0.33	50	50	ENSMUST00000196297.5	ENSMUSG00000031292.15	Cdkl5	chrX	protein_coding	cyclin-dependent kinase-like 5
chrX	159599987	159600087	-	159599987	159606971	A5SS	0.5	50	50	ENSMUST00000196297.5	ENSMUSG00000031292.15	Cdkl5	chrX	protein_coding	cyclin-dependent kinase-like 5
chrX	159582247	159591471	-	159567578	159591471	A3SS	0.33	50	50	ENSMUST00000087104.11	ENSMUSG00000031292.15	Cdkl5	chrX	protein_coding	cyclin-dependent kinase-like 5
chrX	159556617	159594593	-	159591687	159594593	3pMXE	0.5	50	50	ENSMUST00000198931.2	ENSMUSG00000031292.15	Cdkl5	chrX	protein_coding	cyclin-dependent kinase-like 5
chrX	159900320	159904020	+	159878186	159904020	A5SS	0.5	50	50	ENSMUST00000238603.2	ENSMUSG00000000037.18	Scml2	chrX	protein_coding	Scm polycomb group protein like 2
chrX	159907425	159927759	+	159904097	159927759	A5SS	0.5	50	50	ENSMUST00000238603.2	ENSMUSG00000000037.18	Scml2	chrX	protein_coding	Scm polycomb group protein like 2
chrX	159946244	159954486	+	159936906	159954486	A5SS	0.5	50	50	ENSMUST00000238603.2	ENSMUSG00000000037.18	Scml2	chrX	protein_coding	Scm polycomb group protein like 2
chrX	160006236;160008956	160008873;160017609	+	160006236	160017609	cassetteExon	0.5	100	100	ENSMUST00000101113.9	ENSMUSG00000000037.18	Scml2	chrX	protein_coding	Scm polycomb group protein like 2
chrX	160029363;160038177	160038026;160039562	+	160029363	160039562	cassetteExon	0.5	100	100	ENSMUST00000101113.9	ENSMUSG00000000037.18	Scml2	chrX	protein_coding	Scm polycomb group protein like 2
chrX	159985093	159992194	+	159985093	159992191	A3SS	0.5	50	50	ENSMUST00000101113.9	ENSMUSG00000000037.18	Scml2	chrX	protein_coding	Scm polycomb group protein like 2
chrX	160004745	160007457	+	160004745	160006153	A3SS&ES	0.5	50	50	ENSMUST00000101113.9	ENSMUSG00000000037.18	Scml2	chrX	protein_coding	Scm polycomb group protein like 2
chrX	160006236	160007457	+	160006236	160017609	A3SS	0.33	50	50	ENSMUST00000101113.9	ENSMUSG00000000037.18	Scml2	chrX	protein_coding	Scm polycomb group protein like 2
chrX	160017692	160020488	+	160017692	160020476	A3SS	0.5	50	50	ENSMUST00000101113.9	ENSMUSG00000000037.18	Scml2	chrX	protein_coding	Scm polycomb group protein like 2
chrX	160013170	160017609	+	160006236	160017609	A5SS	0.25	50	50	ENSMUST00000101113.9	ENSMUSG00000000037.18	Scml2	chrX	protein_coding	Scm polycomb group protein like 2
chrX	160014479	160017609	+	160006236	160017609	A5SS	0.25	50	50	ENSMUST00000101113.9	ENSMUSG00000000037.18	Scml2	chrX	protein_coding	Scm polycomb group protein like 2
chrX	160004745;160007540	160007457;160008873	+	160004745;160006236	160006153;160008873	MXE	0.5	100	100	ENSMUST00000087090.10	ENSMUSG00000000037.18	Scml2	chrX	protein_coding	Scm polycomb group protein like 2
chrX	160006236;160007540	160007457;160008873	+	160006236	160008873	cassetteExon	0.5	100	100	ENSMUST00000087090.10	ENSMUSG00000000037.18	Scml2	chrX	protein_coding	Scm polycomb group protein like 2
chrX	160008956	160010369	+	160008956	160017609	A3SS	0.5	50	50	ENSMUST00000087090.10	ENSMUSG00000000037.18	Scml2	chrX	protein_coding	Scm polycomb group protein like 2
chrX	160013170	160017609	+	160008956	160017609	A5SS	0.25	50	50	ENSMUST00000087090.10	ENSMUSG00000000037.18	Scml2	chrX	protein_coding	Scm polycomb group protein like 2
chrX	160014479	160017609	+	160008956	160017609	A5SS	0.25	50	50	ENSMUST00000087090.10	ENSMUSG00000000037.18	Scml2	chrX	protein_coding	Scm polycomb group protein like 2
chrX	160004745;160006236	160006153;160007457	+	160004745	160007457	cassetteExon	0.5	100	100	ENSMUST00000074802.12	ENSMUSG00000000037.18	Scml2	chrX	protein_coding	Scm polycomb group protein like 2
chrX	160004745;160006236	160006153;160017609	+	160004745;160013170	160007457;160017609	MXE	0.5	100	100	ENSMUST00000074802.12	ENSMUSG00000000037.18	Scml2	chrX	protein_coding	Scm polycomb group protein like 2
chrX	160013170;160014479	160014396;160017609	+	160013170	160017609	cassetteExon	0.5	100	100	ENSMUST00000074802.12	ENSMUSG00000000037.18	Scml2	chrX	protein_coding	Scm polycomb group protein like 2
chrX	160029363	160039562	+	160029363	160038026	3pMXE	0.5	50	50	ENSMUST00000077375.5	ENSMUSG00000000037.18	Scml2	chrX	protein_coding	Scm polycomb group protein like 2
chrX	160081112	160083836	+	160080867	160083836	A5SS	0.33	50	50	ENSMUST00000141946.3	ENSMUSG00000108981.2	Gm15262	chrX	protein_coding	predicted gene 15262
chrX	160081393	160083836	+	160080867	160083836	A5SS	0.33	50	50	ENSMUST00000141946.3	ENSMUSG00000108981.2	Gm15262	chrX	protein_coding	predicted gene 15262
chrX	160107482	160109458	+	160107482;160108870	160108814;160109458	ES	0.5	50	50	ENSMUST00000207353.2	ENSMUSG00000108981.2	Gm15262	chrX	protein_coding	predicted gene 15262
chrX	160081393	160083836	+	160081112	160083836	A5SS	0.33	50	50	ENSMUST00000207800.2	ENSMUSG00000108981.2	Gm15262	chrX	protein_coding	predicted gene 15262
chrX	160500858	160560525	+	160500263	160560525	A5SS	0.5	50	50	ENSMUST00000112338.2	ENSMUSG00000043518.8	Rai2	chrX	protein_coding	retinoic acid induced 2
chrX	160600870	160603021	-	160600870	160602149	A5SS	0.5	50	50	ENSMUST00000136860.3	ENSMUSG00000086540.3	Scml1	chrX	transcribed_unitary_pseudogene	Scm polycomb group protein like 1
chrX	160630210	160654465	-	160630210;160632533	160632471;160654465	ES	0.5	50	50	ENSMUST00000087085.10	ENSMUSG00000059493.14	Nhs	chrX	protein_coding	NHS actin remodeling regulator
chrX	161348347	161348559	-	161348347	161348478	5pMXE	0.33	50	50	ENSMUST00000154424.8	ENSMUSG00000040855.16	Reps2	chrX	protein_coding	RALBP1 associated Eps domain containing protein 2
chrX	161348347	161426270	-	161348347	161348478	5pMXE	0.33	50	50	ENSMUST00000154424.8	ENSMUSG00000040855.16	Reps2	chrX	protein_coding	RALBP1 associated Eps domain containing protein 2
chrX	161290648	161295675	-	161254852	161295675	A3SS	0.5	50	50	ENSMUST00000154424.8	ENSMUSG00000040855.16	Reps2	chrX	protein_coding	RALBP1 associated Eps domain containing protein 2
chrX	161297347	161301325	-	161297344	161301325	A3SS	0.5	50	50	ENSMUST00000154424.8	ENSMUSG00000040855.16	Reps2	chrX	protein_coding	RALBP1 associated Eps domain containing protein 2
chrX	161335665	161337793	-	161335662	161337793	A3SS	0.5	50	50	ENSMUST00000154424.8	ENSMUSG00000040855.16	Reps2	chrX	protein_coding	RALBP1 associated Eps domain containing protein 2
chrX	161254852	161286767	-	161254852	161295675	A5SS	0.5	50	50	ENSMUST00000154424.8	ENSMUSG00000040855.16	Reps2	chrX	protein_coding	RALBP1 associated Eps domain containing protein 2
chrX	161348347	161348559	-	161348347	161426270	A5SS	0.33	50	50	ENSMUST00000101102.2	ENSMUSG00000040855.16	Reps2	chrX	protein_coding	RALBP1 associated Eps domain containing protein 2
chrX	161551993	161552787	+	161551993	161552760	A3SS	0.5	50	50	ENSMUST00000033720.12	ENSMUSG00000031353.14	Rbbp7	chrX	protein_coding	retinoblastoma binding protein 7, chromatin remodeling factor
chrX	161544159	161544571	+	161543703	161544571	A5SS	0.5	50	50	ENSMUST00000033720.12	ENSMUSG00000031353.14	Rbbp7	chrX	protein_coding	retinoblastoma binding protein 7, chromatin remodeling factor
chrX	161611134	161612235	-	161594591	161612235	A3SS	0.5	50	50	ENSMUST00000041370.11	ENSMUSG00000038344.15	Txlng	chrX	protein_coding	taxilin gamma
chrX	161684390	161693005	+	161684390;161686634	161686430;161693005	ES	0.5	50	50	ENSMUST00000101095.9	ENSMUSG00000031360.15	Ctps2	chrX	protein_coding	cytidine 5'-triphosphate synthase 2
chrX	161693175	161704195	+	161693175;161696304	161696204;161704195	ES	0.5	50	50	ENSMUST00000101095.9	ENSMUSG00000031360.15	Ctps2	chrX	protein_coding	cytidine 5'-triphosphate synthase 2
chrX	161758275	161779701	+	161758275	161761450	3pMXE	0.33	50	50	ENSMUST00000101095.9	ENSMUSG00000031360.15	Ctps2	chrX	protein_coding	cytidine 5'-triphosphate synthase 2
chrX	161758275	161794058	+	161758275	161761450	3pMXE	0.33	50	50	ENSMUST00000101095.9	ENSMUSG00000031360.15	Ctps2	chrX	protein_coding	cytidine 5'-triphosphate synthase 2
chrX	161684743	161686430	+	161684390	161686430	A5SS	0.16	50	50	ENSMUST00000101095.9	ENSMUSG00000031360.15	Ctps2	chrX	protein_coding	cytidine 5'-triphosphate synthase 2
chrX	161684835	161686430	+	161684390	161686430	A5SS	0.16	50	50	ENSMUST00000101095.9	ENSMUSG00000031360.15	Ctps2	chrX	protein_coding	cytidine 5'-triphosphate synthase 2
chrX	161684910	161686430	+	161684390	161686430	A5SS	0.16	50	50	ENSMUST00000101095.9	ENSMUSG00000031360.15	Ctps2	chrX	protein_coding	cytidine 5'-triphosphate synthase 2
chrX	161685376	161686430	+	161684390	161686430	A5SS	0.16	50	50	ENSMUST00000101095.9	ENSMUSG00000031360.15	Ctps2	chrX	protein_coding	cytidine 5'-triphosphate synthase 2
chrX	161685672	161686430	+	161684390	161686430	A5SS	0.16	50	50	ENSMUST00000101095.9	ENSMUSG00000031360.15	Ctps2	chrX	protein_coding	cytidine 5'-triphosphate synthase 2
chrX	161712786	161714623	+	161710552	161714623	A5SS	0.5	50	50	ENSMUST00000101095.9	ENSMUSG00000031360.15	Ctps2	chrX	protein_coding	cytidine 5'-triphosphate synthase 2
chrX	161752128	161758179	+	161724840	161758179	A5SS	0.5	50	50	ENSMUST00000101095.9	ENSMUSG00000031360.15	Ctps2	chrX	protein_coding	cytidine 5'-triphosphate synthase 2
chrX	161684743	161686430	+	161684835	161686430	A5SS	0.16	50	50	ENSMUST00000112303.8	ENSMUSG00000031360.15	Ctps2	chrX	protein_coding	cytidine 5'-triphosphate synthase 2
chrX	161684910	161686430	+	161684835	161686430	A5SS	0.16	50	50	ENSMUST00000112303.8	ENSMUSG00000031360.15	Ctps2	chrX	protein_coding	cytidine 5'-triphosphate synthase 2
chrX	161685376	161686430	+	161684835	161686430	A5SS	0.16	50	50	ENSMUST00000112303.8	ENSMUSG00000031360.15	Ctps2	chrX	protein_coding	cytidine 5'-triphosphate synthase 2
chrX	161685672	161686430	+	161684835	161686430	A5SS	0.16	50	50	ENSMUST00000112303.8	ENSMUSG00000031360.15	Ctps2	chrX	protein_coding	cytidine 5'-triphosphate synthase 2
chrX	161684910	161686430	+	161684743	161686430	A5SS	0.16	50	50	ENSMUST00000033727.14	ENSMUSG00000031360.15	Ctps2	chrX	protein_coding	cytidine 5'-triphosphate synthase 2
chrX	161685376	161686430	+	161684743	161686430	A5SS	0.16	50	50	ENSMUST00000033727.14	ENSMUSG00000031360.15	Ctps2	chrX	protein_coding	cytidine 5'-triphosphate synthase 2
chrX	161685672	161686430	+	161684743	161686430	A5SS	0.16	50	50	ENSMUST00000033727.14	ENSMUSG00000031360.15	Ctps2	chrX	protein_coding	cytidine 5'-triphosphate synthase 2
chrX	161684910;161685672	161685572;161686430	+	161684910	161686430	cassetteExon	0.5	100	100	ENSMUST00000112302.8	ENSMUSG00000031360.15	Ctps2	chrX	protein_coding	cytidine 5'-triphosphate synthase 2
chrX	161758275	161779701	+	161758275	161794058	A3SS	0.33	50	50	ENSMUST00000112302.8	ENSMUSG00000031360.15	Ctps2	chrX	protein_coding	cytidine 5'-triphosphate synthase 2
chrX	161685376	161686430	+	161684910	161686430	A5SS	0.16	50	50	ENSMUST00000112302.8	ENSMUSG00000031360.15	Ctps2	chrX	protein_coding	cytidine 5'-triphosphate synthase 2
chrX	161783154	161794058	+	161758275	161794058	A5SS	0.5	50	50	ENSMUST00000112302.8	ENSMUSG00000031360.15	Ctps2	chrX	protein_coding	cytidine 5'-triphosphate synthase 2
chrX	161685376	161686430	+	161685672	161686430	A5SS&ES	0.25	50	50	ENSMUST00000151424.2	ENSMUSG00000031360.15	Ctps2	chrX	protein_coding	cytidine 5'-triphosphate synthase 2
chrX	162700839	162715129	+	162700839;162714367	162714359;162715129	ES	0.33	50	50	ENSMUST00000069041.15	ENSMUSG00000031367.16	Ap1s2	chrX	protein_coding	adaptor-related protein complex 1, sigma 2 subunit
chrX	162700839;162703996	162703902;162715129	+	162700839;162714367	162714359;162715129	MXE	0.5	100	100	ENSMUST00000069041.15	ENSMUSG00000031367.16	Ap1s2	chrX	protein_coding	adaptor-related protein complex 1, sigma 2 subunit
chrX	162700839	162709899	+	162700839	162714359	A3SS	0.25	50	50	ENSMUST00000069041.15	ENSMUSG00000031367.16	Ap1s2	chrX	protein_coding	adaptor-related protein complex 1, sigma 2 subunit
chrX	162700839;162703996	162703902;162715129	+	162700839	162715129	cassetteExon	0.5	100	100	ENSMUST00000033734.14	ENSMUSG00000031367.16	Ap1s2	chrX	protein_coding	adaptor-related protein complex 1, sigma 2 subunit
chrX	162700839	162709899	+	162700839	162715129	A3SS	0.25	50	50	ENSMUST00000033734.14	ENSMUSG00000031367.16	Ap1s2	chrX	protein_coding	adaptor-related protein complex 1, sigma 2 subunit
chrX	162700839	162703902	+	162700839	162709899	A3SS	0.25	50	50	ENSMUST00000112294.9	ENSMUSG00000031367.16	Ap1s2	chrX	protein_coding	adaptor-related protein complex 1, sigma 2 subunit
chrX	162741415	162741584	-	162741415	162741523	5pMXE	0.5	50	50	ENSMUST00000147928.8	ENSMUSG00000031370.13	Zrsr2	chrX	protein_coding	zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2
chrX	162858665	162859183	-	162858665	162859011	5pMXE	0.33	50	50	ENSMUST00000037928.9	ENSMUSG00000040749.12	Siah1b	chrX	protein_coding	siah E3 ubiquitin protein ligase 1B
chrX	162858665	162859111	-	162858665	162859011	A5SS	0.33	50	50	ENSMUST00000037928.9	ENSMUSG00000040749.12	Siah1b	chrX	protein_coding	siah E3 ubiquitin protein ligase 1B
chrX	162858665	162859183	-	162858665	162859111	5pMXE	0.33	50	50	ENSMUST00000071667.9	ENSMUSG00000040749.12	Siah1b	chrX	protein_coding	siah E3 ubiquitin protein ligase 1B
chrX	162889085	162901192	+	162889085;162891515	162891321;162901192	ES	0.5	50	50	ENSMUST00000112280.8	ENSMUSG00000015401.13	Cltrn	chrX	protein_coding	collectrin, amino acid transport regulator
chrX	162875339	162877872	+	162873743	162877872	A5SS	0.5	50	50	ENSMUST00000112280.8	ENSMUSG00000015401.13	Cltrn	chrX	protein_coding	collectrin, amino acid transport regulator
chrX	163032155	163033278	-	163032155	163041044	A5SS	0.5	50	50	ENSMUST00000112265.9	ENSMUSG00000031377.12	Bmx	chrX	protein_coding	BMX non-receptor tyrosine kinase
chrX	163083426	163090200	+	163083426	163113011	A3SS	0.5	50	50	ENSMUST00000145412.8	ENSMUSG00000031379.14	Pir	chrX	protein_coding	pirin
chrX	163052673	163054599	+	163052471	163054599	A5SS	0.5	50	50	ENSMUST00000145412.8	ENSMUSG00000031379.14	Pir	chrX	protein_coding	pirin
chrX	163202836	163210928	+	163202836;163205699	163205580;163210928	ES	0.16	50	50	ENSMUST00000208741.2	ENSMUSG00000031381.17	Piga	chrX	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class A
chrX	163202964	163205580	+	163202836	163205580	A5SS	0.5	50	50	ENSMUST00000208741.2	ENSMUSG00000031381.17	Piga	chrX	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class A
chrX	163205660	163210928	+	163205699	163210928	A5SS	0.16	50	50	ENSMUST00000208741.2	ENSMUSG00000031381.17	Piga	chrX	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class A
chrX	163205982	163210928	+	163205699	163210928	A5SS	0.16	50	50	ENSMUST00000208741.2	ENSMUSG00000031381.17	Piga	chrX	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class A
chrX	163205982	163211536	+	163211060	163211536	A5SS&ES	0.5	50	50	ENSMUST00000208741.2	ENSMUSG00000031381.17	Piga	chrX	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class A
chrX	163206359	163210928	+	163205699	163210928	A5SS	0.16	50	50	ENSMUST00000208741.2	ENSMUSG00000031381.17	Piga	chrX	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class A
chrX	163206668	163210928	+	163205699	163210928	A5SS	0.16	50	50	ENSMUST00000208741.2	ENSMUSG00000031381.17	Piga	chrX	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class A
chrX	163202836	163210928	+	163202836;163205982	163205580;163210928	ES	0.16	50	50	ENSMUST00000112257.10	ENSMUSG00000031381.17	Piga	chrX	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class A
chrX	163205982	163211536	+	163205982;163211060	163210928;163211536	ES	0.5	50	50	ENSMUST00000112257.10	ENSMUSG00000031381.17	Piga	chrX	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class A
chrX	163205660	163210928	+	163205982	163210928	A5SS	0.16	50	50	ENSMUST00000112257.10	ENSMUSG00000031381.17	Piga	chrX	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class A
chrX	163206359	163210928	+	163205982	163210928	A5SS	0.16	50	50	ENSMUST00000112257.10	ENSMUSG00000031381.17	Piga	chrX	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class A
chrX	163206668	163210928	+	163205982	163210928	A5SS	0.16	50	50	ENSMUST00000112257.10	ENSMUSG00000031381.17	Piga	chrX	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class A
chrX	163202836	163210928	+	163202836;163206359	163205580;163210928	ES	0.16	50	50	ENSMUST00000033754.15	ENSMUSG00000031381.17	Piga	chrX	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class A
chrX	163205660	163210928	+	163206359	163210928	A5SS	0.16	50	50	ENSMUST00000033754.15	ENSMUSG00000031381.17	Piga	chrX	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class A
chrX	163206668	163210928	+	163206359	163210928	A5SS	0.16	50	50	ENSMUST00000033754.15	ENSMUSG00000031381.17	Piga	chrX	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class A
chrX	163202836	163210928	+	163202836;163206668	163205580;163210928	ES	0.16	50	50	ENSMUST00000151911.9	ENSMUSG00000031381.17	Piga	chrX	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class A
chrX	163205660	163210928	+	163206668	163210928	A5SS	0.16	50	50	ENSMUST00000151911.9	ENSMUSG00000031381.17	Piga	chrX	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class A
chrX	163202836;163205660	163205580;163210928	+	163202836	163210928	cassetteExon	0.5	100	100	ENSMUST00000208697.2	ENSMUSG00000031381.17	Piga	chrX	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class A
chrX	163202836;163205982	163205580;163211536	+	163202836;163211060	163210928;163211536	MXE	0.5	100	100	ENSMUST00000208697.2	ENSMUSG00000031381.17	Piga	chrX	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class A
chrX	163206359	163210928	+	163202836	163210928	A5SS	0.16	50	50	ENSMUST00000208697.2	ENSMUSG00000031381.17	Piga	chrX	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class A
chrX	163206668	163210928	+	163202836	163210928	A5SS	0.16	50	50	ENSMUST00000208697.2	ENSMUSG00000031381.17	Piga	chrX	protein_coding	phosphatidylinositol glycan anchor biosynthesis, class A
chrX	163220221;163221215	163221003;163228725	+	163220221	163228725	cassetteExon	0.5	100	100	ENSMUST00000036858.11	ENSMUSG00000031382.15	Asb11	chrX	protein_coding	ankyrin repeat and SOCS box-containing 11
chrX	163220221	163228725	+	163221215	163228725	5pMXE	0.5	50	50	ENSMUST00000033755.6	ENSMUSG00000031382.15	Asb11	chrX	protein_coding	ankyrin repeat and SOCS box-containing 11
chrX	163720299	163722639	-	163720080	163722639	A3SS	0.33	50	50	ENSMUST00000112248.9	ENSMUSG00000061778.11	Mospd2	chrX	protein_coding	motile sperm domain containing 2
chrX	163721688	163722639	-	163720080	163722639	A3SS	0.33	50	50	ENSMUST00000112248.9	ENSMUSG00000061778.11	Mospd2	chrX	protein_coding	motile sperm domain containing 2
chrX	163748133	163763131	-	163748133	163762990	A5SS&ES	0.5	50	50	ENSMUST00000112248.9	ENSMUSG00000061778.11	Mospd2	chrX	protein_coding	motile sperm domain containing 2
chrX	163721688	163722639	-	163720299	163722639	A3SS	0.33	50	50	ENSMUST00000112247.9	ENSMUSG00000061778.11	Mospd2	chrX	protein_coding	motile sperm domain containing 2
chrX	164953546	164961788	+	164953546;164960075	164959841;164961788	ES	0.33	50	50	ENSMUST00000130880.9	ENSMUSG00000040621.15	Gemin8	chrX	protein_coding	gem nuclear organelle associated protein 8
chrX	164953546;164961638	164961530;164961788	+	164953546;164960075	164959841;164961788	MXE	0.5	100	100	ENSMUST00000130880.9	ENSMUSG00000040621.15	Gemin8	chrX	protein_coding	gem nuclear organelle associated protein 8
chrX	164961826	164963442	+	164961826	164963349	A3SS	0.5	50	50	ENSMUST00000130880.9	ENSMUSG00000040621.15	Gemin8	chrX	protein_coding	gem nuclear organelle associated protein 8
chrX	164953546;164961638	164961530;164961788	+	164953546	164961788	cassetteExon	0.5	100	100	ENSMUST00000056410.11	ENSMUSG00000040621.15	Gemin8	chrX	protein_coding	gem nuclear organelle associated protein 8
chrX	164953546	164961788	+	164961638	164961788	5pMXE	0.33	50	50	ENSMUST00000166440.2	ENSMUSG00000040621.15	Gemin8	chrX	protein_coding	gem nuclear organelle associated protein 8
chrX	164960075	164961788	+	164961638	164961788	5pMXE	0.33	50	50	ENSMUST00000166440.2	ENSMUSG00000040621.15	Gemin8	chrX	protein_coding	gem nuclear organelle associated protein 8
chrX	165166996	165169948	+	165166996	165168387	A3SS	0.5	50	50	ENSMUST00000112235.8	ENSMUSG00000031342.18	Gpm6b	chrX	protein_coding	glycoprotein m6b
chrX	165128077	165155634	+	165022132	165155634	A5SS	0.25	50	50	ENSMUST00000112235.8	ENSMUSG00000031342.18	Gpm6b	chrX	protein_coding	glycoprotein m6b
chrX	165136680	165155634	+	165022132	165155634	A5SS	0.25	50	50	ENSMUST00000112235.8	ENSMUSG00000031342.18	Gpm6b	chrX	protein_coding	glycoprotein m6b
chrX	165150170	165155634	+	165022132	165155634	A5SS	0.25	50	50	ENSMUST00000112235.8	ENSMUSG00000031342.18	Gpm6b	chrX	protein_coding	glycoprotein m6b
chrX	165166996;165168477	165168387;165169948	+	165166996	165169948	cassetteExon	0.5	100	100	ENSMUST00000060210.14	ENSMUSG00000031342.18	Gpm6b	chrX	protein_coding	glycoprotein m6b
chrX	165128077	165150024	+	165128077;165136680	165136561;165150024	ES	0.5	50	50	ENSMUST00000123408.8	ENSMUSG00000031342.18	Gpm6b	chrX	protein_coding	glycoprotein m6b
chrX	165136680	165155634	+	165136680;165150170	165150024;165155634	ES	0.33	50	50	ENSMUST00000123408.8	ENSMUSG00000031342.18	Gpm6b	chrX	protein_coding	glycoprotein m6b
chrX	165128077	165155634	+	165128077;165150170	165150024;165155634	ES	0.33	50	50	ENSMUST00000143263.8	ENSMUSG00000031342.18	Gpm6b	chrX	protein_coding	glycoprotein m6b
chrX	165128077;165136680	165136561;165155634	+	165128077;165150170	165150024;165155634	MXE	0.5	100	100	ENSMUST00000143263.8	ENSMUSG00000031342.18	Gpm6b	chrX	protein_coding	glycoprotein m6b
chrX	165128077	165155634	+	165128077;165136680	165136561;165155634	ES	0.33	50	50	ENSMUST00000112223.8	ENSMUSG00000031342.18	Gpm6b	chrX	protein_coding	glycoprotein m6b
chrX	165228369	165229787	+	165223835	165229787	A5SS	0.5	50	50	ENSMUST00000116495.8	ENSMUSG00000079317.11	Trappc2	chrX	protein_coding	trafficking protein particle complex 2
chrX	165232899	165235133	+	165233710	165235133	A5SS&ES	0.5	50	50	ENSMUST00000116495.8	ENSMUSG00000079317.11	Trappc2	chrX	protein_coding	trafficking protein particle complex 2
chrX	165241339;165242005	165241888;165245311	-	165241339	165245311	cassetteExon	0.5	100	100	ENSMUST00000112091.9	ENSMUSG00000079316.11	Rab9	chrX	protein_coding	RAB9, member RAS oncogene family
chrX	165245338;165248118	165248090;165262536	-	165245338	165262536	cassetteExon	0.5	100	100	ENSMUST00000112091.9	ENSMUSG00000079316.11	Rab9	chrX	protein_coding	RAB9, member RAS oncogene family
chrX	165245338	165258277	-	165245338	165262536	A5SS	0.33	50	50	ENSMUST00000112091.9	ENSMUSG00000079316.11	Rab9	chrX	protein_coding	RAB9, member RAS oncogene family
chrX	165245338	165258277	-	165245338	165248090	A5SS&ES	0.33	50	50	ENSMUST00000049435.15	ENSMUSG00000079316.11	Rab9	chrX	protein_coding	RAB9, member RAS oncogene family
chrX	165292002	165301413	-	165292002	165293289	5pMXE	0.5	50	50	ENSMUST00000112188.8	ENSMUSG00000051224.14	Tceanc	chrX	protein_coding	transcription elongation factor A (SII) N-terminal and central domain containing
chrX	165846571;165848001	165847833;165851276	-	165846571	165851276	cassetteExon	0.5	100	100	ENSMUST00000133867.8	ENSMUSG00000086008.9	Gm8817	chrX	lncRNA	predicted gene 8817
chrX	165991047	165991319	-	165991047	165992102	A5SS	0.33	50	50	ENSMUST00000112172.4	ENSMUSG00000049775.17	Tmsb4x	chrX	protein_coding	thymosin, beta 4, X chromosome
chrX	165991047	165992004	-	165991047	165992102	A5SS	0.33	50	50	ENSMUST00000112172.4	ENSMUSG00000049775.17	Tmsb4x	chrX	protein_coding	thymosin, beta 4, X chromosome
chrX	165991047	165991319	-	165991047	165992004	A5SS	0.33	50	50	ENSMUST00000112176.8	ENSMUSG00000049775.17	Tmsb4x	chrX	protein_coding	thymosin, beta 4, X chromosome
chrX	166028845	166047148	-	166028845;166046886	166046745;166047148	ES	0.5	50	50	ENSMUST00000112170.2	ENSMUSG00000040522.6	Tlr8	chrX	protein_coding	toll-like receptor 8
chrX	166042461	166046745	-	166028845	166046745	A3SS	0.5	50	50	ENSMUST00000112170.2	ENSMUSG00000040522.6	Tlr8	chrX	protein_coding	toll-like receptor 8
chrX	166028845	166047148	-	166028845	166046745	5pMXE	0.5	50	50	ENSMUST00000049023.3	ENSMUSG00000040522.6	Tlr8	chrX	protein_coding	toll-like receptor 8
chrX	166091481	166092277	-	166091481;166091852	166091785;166092277	ES	0.5	50	50	ENSMUST00000112161.8	ENSMUSG00000044583.14	Tlr7	chrX	protein_coding	toll-like receptor 7
chrX	166091852	166112997	-	166091852;166092357	166092277;166112997	ES	0.25	50	50	ENSMUST00000112161.8	ENSMUSG00000044583.14	Tlr7	chrX	protein_coding	toll-like receptor 7
chrX	166100794	166112997	-	166092357	166112997	A3SS	0.25	50	50	ENSMUST00000112161.8	ENSMUSG00000044583.14	Tlr7	chrX	protein_coding	toll-like receptor 7
chrX	166113095	166113397	-	166113095	166113433	A5SS	0.5	50	50	ENSMUST00000112161.8	ENSMUSG00000044583.14	Tlr7	chrX	protein_coding	toll-like receptor 7
chrX	166091481;166091852	166091785;166112997	-	166091481	166112997	cassetteExon	0.5	100	100	ENSMUST00000060719.12	ENSMUSG00000044583.14	Tlr7	chrX	protein_coding	toll-like receptor 7
chrX	166091481;166092357	166092277;166112997	-	166091481	166112997	cassetteExon	0.5	100	100	ENSMUST00000060719.12	ENSMUSG00000044583.14	Tlr7	chrX	protein_coding	toll-like receptor 7
chrX	166100794	166112997	-	166091481	166112997	A3SS	0.25	50	50	ENSMUST00000060719.12	ENSMUSG00000044583.14	Tlr7	chrX	protein_coding	toll-like receptor 7
chrX	166091481;166092357	166092277;166112997	-	166091481;166091852	166091785;166112997	MXE	0.5	100	100	ENSMUST00000145284.8	ENSMUSG00000044583.14	Tlr7	chrX	protein_coding	toll-like receptor 7
chrX	166100794	166112997	-	166091852	166112997	A3SS	0.25	50	50	ENSMUST00000145284.8	ENSMUSG00000044583.14	Tlr7	chrX	protein_coding	toll-like receptor 7
chrX	166155578	166156999	-	166148213	166156999	A3SS	0.5	50	50	ENSMUST00000026839.5	ENSMUSG00000025742.6	Prps2	chrX	protein_coding	phosphoribosyl pyrophosphate synthetase 2
chrX	166512131	166680538	-	166512131	166637832	5pMXE	0.25	50	50	ENSMUST00000238211.2	ENSMUSG00000049176.17	Frmpd4	chrX	protein_coding	FERM and PDZ domain containing 4
chrX	166512131	166905782	-	166512131	166637832	5pMXE	0.25	50	50	ENSMUST00000238211.2	ENSMUSG00000049176.17	Frmpd4	chrX	protein_coding	FERM and PDZ domain containing 4
chrX	166512131	167230944	-	166512131	166637832	5pMXE	0.25	50	50	ENSMUST00000238211.2	ENSMUSG00000049176.17	Frmpd4	chrX	protein_coding	FERM and PDZ domain containing 4
chrX	166258293	166259783	-	166258298	166259783	A3SS	0.5	50	50	ENSMUST00000238211.2	ENSMUSG00000049176.17	Frmpd4	chrX	protein_coding	FERM and PDZ domain containing 4
chrX	166512131	167230944	-	166512131;166680634	166680538;167230944	ES	0.5	50	50	ENSMUST00000112147.9	ENSMUSG00000049176.17	Frmpd4	chrX	protein_coding	FERM and PDZ domain containing 4
chrX	166512131	166905782	-	166512131	166680538	A5SS&ES	0.25	50	50	ENSMUST00000112147.9	ENSMUSG00000049176.17	Frmpd4	chrX	protein_coding	FERM and PDZ domain containing 4
chrX	166680634	166907001	-	166680634	167230944	A5SS	0.5	50	50	ENSMUST00000112147.9	ENSMUSG00000049176.17	Frmpd4	chrX	protein_coding	FERM and PDZ domain containing 4
chrX	166512131	167230944	-	166512131	166680538	5pMXE	0.25	50	50	ENSMUST00000112145.3	ENSMUSG00000049176.17	Frmpd4	chrX	protein_coding	FERM and PDZ domain containing 4
chrX	166512131	167230944	-	166512131	166905782	5pMXE	0.25	50	50	ENSMUST00000112149.9	ENSMUSG00000049176.17	Frmpd4	chrX	protein_coding	FERM and PDZ domain containing 4
chrX	167454886	167456724	-	167454886;167455341	167455259;167456724	ES	0.5	50	50	ENSMUST00000033725.16	ENSMUSG00000031358.18	Msl3	chrX	protein_coding	MSL complex subunit 3
chrX	167454886	167456724	-	167454886	167455259	5pMXE	0.5	50	50	ENSMUST00000129860.2	ENSMUSG00000031358.18	Msl3	chrX	protein_coding	MSL complex subunit 3
chrX	168036629	168036761	+	168036629	168039482	A3SS	0.5	50	50	ENSMUST00000033721.13	ENSMUSG00000031355.17	Arhgap6	chrX	protein_coding	Rho GTPase activating protein 6
chrX	168065054	168078038	+	168065054	168083059	A3SS	0.5	50	50	ENSMUST00000033721.13	ENSMUSG00000031355.17	Arhgap6	chrX	protein_coding	Rho GTPase activating protein 6
chrX	167819862	168003194	+	167579807	168003194	A5SS	0.33	50	50	ENSMUST00000033721.13	ENSMUSG00000031355.17	Arhgap6	chrX	protein_coding	Rho GTPase activating protein 6
chrX	167896218	168003194	+	167579807	168003194	A5SS	0.33	50	50	ENSMUST00000033721.13	ENSMUSG00000031355.17	Arhgap6	chrX	protein_coding	Rho GTPase activating protein 6
chrX	168081465	168083059	+	168065054	168083059	A5SS	0.5	50	50	ENSMUST00000033721.13	ENSMUSG00000031355.17	Arhgap6	chrX	protein_coding	Rho GTPase activating protein 6
chrX	167896218	168003194	+	167819862	168003194	A5SS	0.33	50	50	ENSMUST00000143048.2	ENSMUSG00000031355.17	Arhgap6	chrX	protein_coding	Rho GTPase activating protein 6
chrX	167965525;167965663	167965622;167966896	-	167965525	167966896	cassetteExon	0.5	100	100	ENSMUST00000066112.12	ENSMUSG00000031354.17	Amelx	chrX	protein_coding	amelogenin, X-linked
chrX	167963172	167964774	-	167961055	167964774	A3SS	0.5	50	50	ENSMUST00000066112.12	ENSMUSG00000031354.17	Amelx	chrX	protein_coding	amelogenin, X-linked
chrX	167964848	167965481	-	167965211	167965481	A3SS	0.33	50	50	ENSMUST00000066112.12	ENSMUSG00000031354.17	Amelx	chrX	protein_coding	amelogenin, X-linked
chrX	167965139	167965481	-	167965211	167965481	A3SS	0.33	50	50	ENSMUST00000066112.12	ENSMUSG00000031354.17	Amelx	chrX	protein_coding	amelogenin, X-linked
chrX	167964848	167965481	-	167965139	167965481	A3SS	0.33	50	50	ENSMUST00000112120.8	ENSMUSG00000031354.17	Amelx	chrX	protein_coding	amelogenin, X-linked
chrX	168098717;168099690	168099542;168099992	-	168098717	168099992	cassetteExon	0.5	100	100	ENSMUST00000154638.9	ENSMUSG00000031352.11	Hccs	chrX	protein_coding	holocytochrome c synthetase
chrX	168096018	168096584	-	168084942	168096584	A3SS	0.5	50	50	ENSMUST00000154638.9	ENSMUSG00000031352.11	Hccs	chrX	protein_coding	holocytochrome c synthetase
chrX	168102586	168102972	-	168102586	168103171	A5SS	0.33	50	50	ENSMUST00000154638.9	ENSMUSG00000031352.11	Hccs	chrX	protein_coding	holocytochrome c synthetase
chrX	168102586	168103111	-	168102586	168103171	A5SS	0.33	50	50	ENSMUST00000154638.9	ENSMUSG00000031352.11	Hccs	chrX	protein_coding	holocytochrome c synthetase
chrX	168102586	168102972	-	168102586	168103111	A5SS	0.33	50	50	ENSMUST00000033717.9	ENSMUSG00000031352.11	Hccs	chrX	protein_coding	holocytochrome c synthetase
chrX	168103693	168105746	+	168103693;168104829	168104751;168105746	ES	0.5	50	50	ENSMUST00000156210.8	ENSMUSG00000087159.8	Gm15246	chrX	lncRNA	predicted gene 15246
chrX	168765029;168765537	168765473;168766952	+	168765029	168766952	cassetteExon	0.5	100	100	ENSMUST00000112107.8	ENSMUSG00000035299.17	Mid1	chrX	protein_coding	midline 1
chrX	168468368	168709950	+	168468368	168583736	A3SS&ES	0.5	50	50	ENSMUST00000112107.8	ENSMUSG00000035299.17	Mid1	chrX	protein_coding	midline 1
chrX	168768138	168768932	+	168768138	168768893	A3SS	0.5	50	50	ENSMUST00000112107.8	ENSMUSG00000035299.17	Mid1	chrX	protein_coding	midline 1
chrX	168710551	168749059	+	168583788	168749059	A5SS	0.33	50	50	ENSMUST00000112107.8	ENSMUSG00000035299.17	Mid1	chrX	protein_coding	midline 1
chrX	168710665	168749059	+	168583788	168749059	A5SS	0.33	50	50	ENSMUST00000112107.8	ENSMUSG00000035299.17	Mid1	chrX	protein_coding	midline 1
chrX	168755912	168759918	+	168749154	168759918	A5SS	0.2	50	50	ENSMUST00000112107.8	ENSMUSG00000035299.17	Mid1	chrX	protein_coding	midline 1
chrX	168756391	168759918	+	168749154	168759918	A5SS	0.2	50	50	ENSMUST00000112107.8	ENSMUSG00000035299.17	Mid1	chrX	protein_coding	midline 1
chrX	168758302	168759918	+	168749154	168759918	A5SS	0.2	50	50	ENSMUST00000112107.8	ENSMUSG00000035299.17	Mid1	chrX	protein_coding	midline 1
chrX	168758989	168759918	+	168749154	168759918	A5SS	0.2	50	50	ENSMUST00000112107.8	ENSMUSG00000035299.17	Mid1	chrX	protein_coding	midline 1
chrX	168762534	168764881	+	168760025	168764881	A5SS	0.5	50	50	ENSMUST00000112107.8	ENSMUSG00000035299.17	Mid1	chrX	protein_coding	midline 1
chrX	168468368;168583788	168583736;168749059	+	168468368;168710665	168709950;168749059	MXE	0.5	100	100	ENSMUST00000112104.8	ENSMUSG00000035299.17	Mid1	chrX	protein_coding	midline 1
chrX	168611221	168709950	+	168468368	168709950	A5SS	0.33	50	50	ENSMUST00000112104.8	ENSMUSG00000035299.17	Mid1	chrX	protein_coding	midline 1
chrX	168662905	168709950	+	168468368	168709950	A5SS	0.33	50	50	ENSMUST00000112104.8	ENSMUSG00000035299.17	Mid1	chrX	protein_coding	midline 1
chrX	168710551	168749059	+	168710665	168749059	A5SS	0.33	50	50	ENSMUST00000112104.8	ENSMUSG00000035299.17	Mid1	chrX	protein_coding	midline 1
chrX	168662905	168709950	+	168611221	168709950	A5SS	0.33	50	50	ENSMUST00000036753.12	ENSMUSG00000035299.17	Mid1	chrX	protein_coding	midline 1
chrX	168756391	168759918	+	168755912	168759918	A5SS	0.2	50	50	ENSMUST00000133857.8	ENSMUSG00000035299.17	Mid1	chrX	protein_coding	midline 1
chrX	168758302	168759918	+	168755912	168759918	A5SS	0.2	50	50	ENSMUST00000133857.8	ENSMUSG00000035299.17	Mid1	chrX	protein_coding	midline 1
chrX	168758989	168759918	+	168755912	168759918	A5SS	0.2	50	50	ENSMUST00000133857.8	ENSMUSG00000035299.17	Mid1	chrX	protein_coding	midline 1
chrX	168758302	168759918	+	168756391	168759918	A5SS	0.2	50	50	ENSMUST00000146073.8	ENSMUSG00000035299.17	Mid1	chrX	protein_coding	midline 1
chrX	168758989	168759918	+	168756391	168759918	A5SS	0.2	50	50	ENSMUST00000146073.8	ENSMUSG00000035299.17	Mid1	chrX	protein_coding	midline 1
chrX	168758302	168759918	+	168758302;168758989	168758923;168759918	ES	0.5	50	50	ENSMUST00000152163.8	ENSMUSG00000035299.17	Mid1	chrX	protein_coding	midline 1
chrX	168758302	168759918	+	168758989	168759918	A5SS	0.2	50	50	ENSMUST00000143815.2	ENSMUSG00000035299.17	Mid1	chrX	protein_coding	midline 1
chrX	168560394;168561180	168561090;168562514	-	168560394	168562514	cassetteExon	0.5	100	100	ENSMUST00000068894.2	ENSMUSG00000055357.9	4933400A11Rik	chrX	protein_coding	RIKEN cDNA 4933400A11 gene
chrX	168560390	168561090	-	168560394	168561090	A3SS	0.5	50	50	ENSMUST00000068874.8	ENSMUSG00000055357.9	4933400A11Rik	chrX	protein_coding	RIKEN cDNA 4933400A11 gene
chrX	168560394	168562514	-	168561180	168562514	A3SS&ES	0.5	50	50	ENSMUST00000112102.2	ENSMUSG00000055357.9	4933400A11Rik	chrX	protein_coding	RIKEN cDNA 4933400A11 gene
chrX	168794059	168801699	+	168794059	168801670	A3SS	0.5	50	50	ENSMUST00000238681.2	ENSMUSG00000095562.9	Erdr1	chrX	lncRNA	erythroid differentiation regulator 1
chrX	168792902	168793670	+	168792758	168793670	A5SS	0.5	50	50	ENSMUST00000238681.2	ENSMUSG00000095562.9	Erdr1	chrX	lncRNA	erythroid differentiation regulator 1
chrY	797176	797275	-	797180	797275	A3SS	0.5	50	50	ENSMUST00000189888.7	ENSMUSG00000053211.11	Zfy1	chrY	protein_coding	zinc finger protein 1, Y-linked
chrY	818814	820821	+	818750	820821	A5SS	0.5	50	50	ENSMUST00000190013.7	ENSMUSG00000069053.12	Uba1y	chrY	protein_coding	ubiquitin-activating enzyme, Chr Y
chrY	910586	910657	+	910586	910686	A3SS	0.5	50	50	ENSMUST00000189069.7	ENSMUSG00000056673.15	Kdm5d	chrY	protein_coding	lysine (K)-specific demethylase 5D
chrY	927439	927603	+	927439	927710	A3SS	0.5	50	50	ENSMUST00000055032.14	ENSMUSG00000056673.15	Kdm5d	chrY	protein_coding	lysine (K)-specific demethylase 5D
chrY	1012169	1014634	+	1012169;1013473	1013379;1014634	ES	0.33	50	50	ENSMUST00000091197.4	ENSMUSG00000069049.12	Eif2s3y	chrY	protein_coding	eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked
chrY	1011323;1012169	1011840;1014634	+	1011323	1014634	cassetteExon	0.5	100	100	ENSMUST00000137006.8	ENSMUSG00000069049.12	Eif2s3y	chrY	protein_coding	eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked
chrY	1013473	1014634	+	1011323	1014634	A5SS	0.33	50	50	ENSMUST00000137006.8	ENSMUSG00000069049.12	Eif2s3y	chrY	protein_coding	eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked
chrY	1158634;1161230	1161175;1168090	-	1158634	1168090	cassetteExon	0.5	100	100	ENSMUST00000143286.8	ENSMUSG00000068457.15	Uty	chrY	protein_coding	ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
chrY	1158634;1161230	1161179;1168090	-	1158634	1168090	cassetteExon	0.5	100	100	ENSMUST00000143286.8	ENSMUSG00000068457.15	Uty	chrY	protein_coding	ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
chrY	1168185;1169257	1169123;1169965	-	1168185	1169965	cassetteExon	0.5	100	100	ENSMUST00000143286.8	ENSMUSG00000068457.15	Uty	chrY	protein_coding	ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
chrY	1199513;1239819	1239711;1245156	-	1199513	1245156	cassetteExon	0.5	100	100	ENSMUST00000143286.8	ENSMUSG00000068457.15	Uty	chrY	protein_coding	ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
chrY	1199513;1240147	1239711;1245156	-	1199513	1245156	cassetteExon	0.5	100	100	ENSMUST00000143286.8	ENSMUSG00000068457.15	Uty	chrY	protein_coding	ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
chrY	1170954	1174728	-	1171002	1174728	A3SS	0.33	50	50	ENSMUST00000143286.8	ENSMUSG00000068457.15	Uty	chrY	protein_coding	ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
chrY	1173828	1174728	-	1171002	1174728	A3SS	0.33	50	50	ENSMUST00000143286.8	ENSMUSG00000068457.15	Uty	chrY	protein_coding	ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
chrY	1245216	1245407	-	1245219	1245407	A3SS	0.5	50	50	ENSMUST00000143286.8	ENSMUSG00000068457.15	Uty	chrY	protein_coding	ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
chrY	1174854	1176496	-	1174854	1176491	A5SS	0.5	50	50	ENSMUST00000143286.8	ENSMUSG00000068457.15	Uty	chrY	protein_coding	ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
chrY	1189390	1224497	-	1189390	1197206	A5SS&ES	0.5	50	50	ENSMUST00000143286.8	ENSMUSG00000068457.15	Uty	chrY	protein_coding	ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
chrY	1199513	1224497	-	1199513	1245156	A5SS	0.33	50	50	ENSMUST00000143286.8	ENSMUSG00000068457.15	Uty	chrY	protein_coding	ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
chrY	1224546	1239711	-	1224546;1226826	1226695;1239711	ES	0.33	50	50	ENSMUST00000154666.8	ENSMUSG00000068457.15	Uty	chrY	protein_coding	ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
chrY	1239819;1240147	1239992;1245156	-	1239819	1245156	cassetteExon	0.5	100	100	ENSMUST00000154666.8	ENSMUSG00000068457.15	Uty	chrY	protein_coding	ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
chrY	1173828	1174728	-	1170954	1174728	A3SS	0.33	50	50	ENSMUST00000154666.8	ENSMUSG00000068457.15	Uty	chrY	protein_coding	ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
chrY	1158634	1161175	-	1158634	1161179	A5SS	0.33	50	50	ENSMUST00000154666.8	ENSMUSG00000068457.15	Uty	chrY	protein_coding	ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
chrY	1245219	1245513	-	1245219	1245407	A5SS	0.5	50	50	ENSMUST00000154666.8	ENSMUSG00000068457.15	Uty	chrY	protein_coding	ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
chrY	1199513	1239711	-	1199513;1224546	1224497;1239711	ES	0.33	50	50	ENSMUST00000069309.14	ENSMUSG00000068457.15	Uty	chrY	protein_coding	ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
chrY	1158634	1168090	-	1161230	1168090	3pMXE	0.5	50	50	ENSMUST00000133976.2	ENSMUSG00000068457.15	Uty	chrY	protein_coding	ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
chrY	1168185	1169965	-	1168185	1169123	5pMXE	0.5	50	50	ENSMUST00000133976.2	ENSMUSG00000068457.15	Uty	chrY	protein_coding	ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
chrY	1199513	1224497	-	1189390	1224497	A3SS	0.5	50	50	ENSMUST00000157073.8	ENSMUSG00000068457.15	Uty	chrY	protein_coding	ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
chrY	1199513	1239711	-	1224546	1239711	A3SS&ES	0.33	50	50	ENSMUST00000157073.8	ENSMUSG00000068457.15	Uty	chrY	protein_coding	ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
chrY	1199513	1245156	-	1239819	1245156	A3SS&ES	0.33	50	50	ENSMUST00000157073.8	ENSMUSG00000068457.15	Uty	chrY	protein_coding	ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
chrY	1189390;1224546	1224497;1239711	-	1189390;1199513	1197206;1239711	MXE	0.5	100	100	ENSMUST00000150715.2	ENSMUSG00000068457.15	Uty	chrY	protein_coding	ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
chrY	1226826	1239711	-	1199513	1239711	A3SS	0.33	50	50	ENSMUST00000150715.2	ENSMUSG00000068457.15	Uty	chrY	protein_coding	ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
chrY	1282968	1284322	-	1282948	1284322	A3SS	0.5	50	50	ENSMUST00000091190.12	ENSMUSG00000069045.12	Ddx3y	chrY	protein_coding	DEAD box helicase 3, Y-linked
chrY	2150121	2170149	-	2150121	2150216	5pMXE	0.5	50	50	ENSMUST00000187148.7	ENSMUSG00000000103.13	Zfy2	chrY	protein_coding	zinc finger protein 2, Y-linked
chrY	2830751;2833060	2832910;2833555	+	2830751	2833555	cassetteExon	0.5	100	100	ENSMUST00000171534.8	ENSMUSG00000094658.8	Rbmy	chrY	protein_coding	RNA binding motif protein, Y chromosome
chrY	2830751	2832910	+	2830751	2865206	A3SS	0.33	50	50	ENSMUST00000179404.8	ENSMUSG00000095852.8	Gm10256	chrY	protein_coding	predicted gene 10256
chrY	2830751	2833555	+	2830751	2865206	A3SS	0.33	50	50	ENSMUST00000179404.8	ENSMUSG00000095852.8	Gm10256	chrY	protein_coding	predicted gene 10256
chrY	2862210	2865206	+	2830751	2865206	A5SS	0.33	50	50	ENSMUST00000179404.8	ENSMUSG00000095852.8	Gm10256	chrY	protein_coding	predicted gene 10256
chrY	2864711	2865206	+	2830751	2865206	A5SS	0.33	50	50	ENSMUST00000179404.8	ENSMUSG00000095852.8	Gm10256	chrY	protein_coding	predicted gene 10256
chrY	2862210;2864711	2864561;2865206	+	2862210	2865206	cassetteExon	0.5	100	100	ENSMUST00000189964.7	ENSMUSG00000095852.8	Gm10256	chrY	protein_coding	predicted gene 10256
chrY	3375432	3410096	-	3375432	3378712	5pMXE	0.5	50	50	ENSMUST00000187277.7	ENSMUSG00000093987.8	Gm21704	chrY	protein_coding	predicted gene, 21704
chrY	3407071	3410096	-	3375432	3410096	A3SS	0.33	50	50	ENSMUST00000169382.3	ENSMUSG00000093987.8	Gm21704	chrY	protein_coding	predicted gene, 21704
chrY	3407716	3410096	-	3375432	3410096	A3SS	0.33	50	50	ENSMUST00000169382.3	ENSMUSG00000093987.8	Gm21704	chrY	protein_coding	predicted gene, 21704
chrY	3407071	3410096	-	3407071;3407716	3407566;3410096	ES	0.5	50	50	ENSMUST00000190283.7	ENSMUSG00000095948.8	Gm21708	chrY	protein_coding	predicted gene, 21708
chrY	4780353;4783469	4783413;4787357	-	4780353	4787357	cassetteExon	0.5	100	100	ENSMUST00000187566.7	ENSMUSG00000099684.7	Gm28356	chrY	transcribed_unprocessed_pseudogene	predicted gene 28356
chrY	8255790	8257702	-	8247845	8257702	A3SS	0.5	50	50	ENSMUST00000188980.2	ENSMUSG00000100421.2	Gm29044	chrY	lncRNA	predicted gene 29044
chrY	12514071	12515499	-	12514071;12514782	12514599;12515499	ES	0.5	50	50	ENSMUST00000191742.6	ENSMUSG00000104505.6	Gm37739	chrY	lncRNA	predicted gene, 37739
chrY	12515680	12516170	-	12515684	12516170	A3SS	0.5	50	50	ENSMUST00000191742.6	ENSMUSG00000104505.6	Gm37739	chrY	lncRNA	predicted gene, 37739
chrY	13120107	13121544	-	13120107;13120818	13120635;13121544	ES	0.5	50	50	ENSMUST00000191716.6	ENSMUSG00000102335.6	Gm37231	chrY	lncRNA	predicted gene, 37231
chrY	13252581	13252806	+	13252581	13376777	A3SS	0.5	50	50	ENSMUST00000178599.7	ENSMUSG00000093903.7	Gm21454	chrY	protein_coding	predicted gene, 21454
chrY	13376552	13376777	+	13252581	13376777	A5SS	0.5	50	50	ENSMUST00000178599.7	ENSMUSG00000093903.7	Gm21454	chrY	protein_coding	predicted gene, 21454
chrY	13335850	13337289	-	13335850;13336561	13336378;13337289	ES	0.5	50	50	ENSMUST00000194145.6	ENSMUSG00000104522.6	Gm38159	chrY	lncRNA	predicted gene, 38159
chrY	13423942	13425380	-	13423942;13424652	13424469;13425380	ES	0.5	50	50	ENSMUST00000192349.6	ENSMUSG00000102177.6	Gm37870	chrY	lncRNA	predicted gene, 37870
chrY	13425561	13426049	-	13425565	13426049	A3SS	0.5	50	50	ENSMUST00000192349.6	ENSMUSG00000102177.6	Gm37870	chrY	lncRNA	predicted gene, 37870
chrY	13452355	13453796	-	13452355;13453065	13452882;13453796	ES	0.5	50	50	ENSMUST00000195795.6	ENSMUSG00000102346.6	Gm37378	chrY	lncRNA	predicted gene, 37378
chrY	13953558	13954998	+	13953558;13954470	13954287;13954998	ES	0.5	50	50	ENSMUST00000195874.6	ENSMUSG00000103681.6	Gm37130	chrY	lncRNA	predicted gene, 37130
chrY	13981888	13983326	+	13981888;13982799	13982616;13983326	ES	0.5	50	50	ENSMUST00000192785.6	ENSMUSG00000104409.6	Gm37467	chrY	lncRNA	predicted gene, 37467
chrY	13981219	13981707	+	13981219	13981703	A3SS	0.5	50	50	ENSMUST00000192785.6	ENSMUSG00000104409.6	Gm37467	chrY	lncRNA	predicted gene, 37467
chrY	14072251	14073692	+	14072251;14073164	14072980;14073692	ES	0.5	50	50	ENSMUST00000195029.6	ENSMUSG00000103872.6	Gm38363	chrY	lncRNA	predicted gene, 38363
chrY	14221673	14223115	+	14221673;14222585	14222401;14223115	ES	0.5	50	50	ENSMUST00000191682.6	ENSMUSG00000102787.6	Gm30174	chrY	lncRNA	predicted gene, 30174
chrY	14283326	14284768	+	14283326;14284239	14284055;14284768	ES	0.5	50	50	ENSMUST00000195486.6	ENSMUSG00000104499.6	Gm30353	chrY	lncRNA	predicted gene, 30353
chrY	14348405	14349847	+	14348405;14349318	14349134;14349847	ES	0.5	50	50	ENSMUST00000195371.6	ENSMUSG00000103431.6	Gm30686	chrY	lncRNA	predicted gene, 30686
chrY	14865147	14866585	+	14865147;14866057	14865874;14866585	ES	0.5	50	50	ENSMUST00000193019.6	ENSMUSG00000102251.6	Gm37654	chrY	lncRNA	predicted gene, 37654
chrY	14864478	14864966	+	14864478	14864962	A3SS	0.5	50	50	ENSMUST00000193019.6	ENSMUSG00000102251.6	Gm37654	chrY	lncRNA	predicted gene, 37654
chrY	15242766	15244203	+	15242766;15243676	15243496;15244203	ES	0.5	50	50	ENSMUST00000194043.6	ENSMUSG00000102835.6	Gm37572	chrY	lncRNA	predicted gene, 37572
chrY	15242100	15242588	+	15242100	15242584	A3SS	0.5	50	50	ENSMUST00000194043.6	ENSMUSG00000102835.6	Gm37572	chrY	lncRNA	predicted gene, 37572
chrY	15271360	15272799	+	15271360;15272271	15272088;15272799	ES	0.5	50	50	ENSMUST00000195490.6	ENSMUSG00000103943.6	Gm37344	chrY	lncRNA	predicted gene, 37344
chrY	15270691	15271179	+	15270691	15271175	A3SS	0.5	50	50	ENSMUST00000195490.6	ENSMUSG00000103943.6	Gm37344	chrY	lncRNA	predicted gene, 37344
chrY	15491283	15491773	+	15491283	15491769	A3SS	0.5	50	50	ENSMUST00000192534.2	ENSMUSG00000102138.2	Gm31942	chrY	lncRNA	predicted gene, 31942
chrY	15570898	15572172	-	15570898	15572056	A5SS	0.5	50	50	ENSMUST00000195572.2	ENSMUSG00000102582.2	Gm37440	chrY	lncRNA	predicted gene, 37440
chrY	15735594	15737039	+	15735594;15736510	15736328;15737039	ES	0.5	50	50	ENSMUST00000191812.6	ENSMUSG00000102392.6	Gm37577	chrY	lncRNA	predicted gene, 37577
chrY	15734925	15735409	+	15734925	15735413	A3SS	0.5	50	50	ENSMUST00000191812.6	ENSMUSG00000102392.6	Gm37577	chrY	lncRNA	predicted gene, 37577
chrY	17225940	17227368	-	17225940;17226651	17226468;17227368	ES	0.5	50	50	ENSMUST00000191968.6	ENSMUSG00000102586.6	Gm38003	chrY	lncRNA	predicted gene, 38003
chrY	17227549	17228039	-	17227553	17228039	A3SS	0.5	50	50	ENSMUST00000191968.6	ENSMUSG00000102586.6	Gm38003	chrY	lncRNA	predicted gene, 38003
chrY	17833108	17834545	-	17833108;17833819	17833636;17834545	ES	0.5	50	50	ENSMUST00000194799.6	ENSMUSG00000102520.6	Gm36941	chrY	lncRNA	predicted gene, 36941
chrY	17874931	17875156	+	17874931	17965575	A3SS	0.5	50	50	ENSMUST00000177639.7	ENSMUSG00000094325.8	Gm20831	chrY	protein_coding	predicted gene, 20831
chrY	17965350	17965575	+	17874931	17965575	A5SS	0.5	50	50	ENSMUST00000177639.7	ENSMUSG00000094325.8	Gm20831	chrY	protein_coding	predicted gene, 20831
chrY	18693995	18694483	+	18693995	18694479	A3SS	0.5	50	50	ENSMUST00000195453.6	ENSMUSG00000104407.6	Gm38013	chrY	lncRNA	predicted gene, 38013
chrY	18933932;18934844	18934660;18935374	+	18933932	18935374	cassetteExon	0.5	100	100	ENSMUST00000191625.6	ENSMUSG00000102273.6	Gm34550	chrY	lncRNA	predicted gene, 34550
chrY	18995616	18997058	+	18995616;18996529	18996345;18997058	ES	0.5	50	50	ENSMUST00000194060.6	ENSMUSG00000103190.6	Gm34716	chrY	lncRNA	predicted gene, 34716
chrY	19060708;19061621	19061437;19062150	+	19060708	19062150	cassetteExon	0.5	100	100	ENSMUST00000195750.6	ENSMUSG00000102968.6	Gm35070	chrY	lncRNA	predicted gene, 35070
chrY	19955323	19956760	+	19955323;19956233	19956053;19956760	ES	0.5	50	50	ENSMUST00000191717.6	ENSMUSG00000102195.6	Gm38168	chrY	lncRNA	predicted gene, 38168
chrY	19954657	19955145	+	19954657	19955141	A3SS	0.5	50	50	ENSMUST00000191717.6	ENSMUSG00000102195.6	Gm38168	chrY	lncRNA	predicted gene, 38168
chrY	19983914;19984825	19984642;19985353	+	19983914	19985353	cassetteExon	0.5	100	100	ENSMUST00000193523.6	ENSMUSG00000104506.6	Gm37740	chrY	lncRNA	predicted gene, 37740
chrY	20498281	20499723	+	20498281;20499194	20499010;20499723	ES	0.5	50	50	ENSMUST00000191807.6	ENSMUSG00000103664.6	Gm36261	chrY	lncRNA	predicted gene, 36261
chrY	20560845;20561758	20561574;20562287	+	20560845	20562287	cassetteExon	0.5	100	100	ENSMUST00000195522.6	ENSMUSG00000103752.6	Gm36467	chrY	lncRNA	predicted gene, 36467
chrY	20792651	20794089	+	20792651;20793561	20793381;20794089	ES	0.5	50	50	ENSMUST00000191787.6	ENSMUSG00000103829.6	Gm38174	chrY	lncRNA	predicted gene, 38174
chrY	20791984	20792473	+	20791984	20792469	A3SS	0.5	50	50	ENSMUST00000191787.6	ENSMUSG00000103829.6	Gm38174	chrY	lncRNA	predicted gene, 38174
chrY	21052970	21054411	-	21052970;21053681	21053498;21054411	ES	0.5	50	50	ENSMUST00000191738.6	ENSMUSG00000104131.6	Gm36950	chrY	lncRNA	predicted gene, 36950
chrY	21054592	21055082	-	21054596	21055082	A3SS	0.5	50	50	ENSMUST00000191738.6	ENSMUSG00000104131.6	Gm36950	chrY	lncRNA	predicted gene, 36950
chrY	21346724	21348164	-	21346724;21347434	21347251;21348164	ES	0.5	50	50	ENSMUST00000193386.6	ENSMUSG00000102429.6	Gm37462	chrY	lncRNA	predicted gene, 37462
chrY	21348345	21348835	-	21348349	21348835	A3SS	0.5	50	50	ENSMUST00000193386.6	ENSMUSG00000102429.6	Gm37462	chrY	lncRNA	predicted gene, 37462
chrY	21573119	21574560	-	21573119;21573829	21573646;21574560	ES	0.5	50	50	ENSMUST00000192545.6	ENSMUSG00000104425.6	Gm38370	chrY	lncRNA	predicted gene, 38370
chrY	21574741	21575231	-	21574745	21575231	A3SS	0.5	50	50	ENSMUST00000192545.6	ENSMUSG00000104425.6	Gm38370	chrY	lncRNA	predicted gene, 38370
chrY	21887527	21888966	-	21887527;21888237	21888054;21888966	ES	0.5	50	50	ENSMUST00000192684.6	ENSMUSG00000104345.6	Gm37690	chrY	lncRNA	predicted gene, 37690
chrY	21889146	21889636	-	21889150	21889636	A3SS	0.5	50	50	ENSMUST00000192684.6	ENSMUSG00000104345.6	Gm37690	chrY	lncRNA	predicted gene, 37690
chrY	22105727	22107168	-	22105727;22106438	22106255;22107168	ES	0.5	50	50	ENSMUST00000195759.6	ENSMUSG00000102772.6	Gm32114	chrY	lncRNA	predicted gene, 32114
chrY	22107349	22107839	-	22107353	22107839	A3SS	0.5	50	50	ENSMUST00000195759.6	ENSMUSG00000102772.6	Gm32114	chrY	lncRNA	predicted gene, 32114
chrY	22399271	22400712	-	22399271;22399981	22399798;22400712	ES	0.5	50	50	ENSMUST00000193996.6	ENSMUSG00000103077.6	Gm38371	chrY	lncRNA	predicted gene, 38371
chrY	22692410	22693850	-	22692410;22693120	22692937;22693850	ES	0.5	50	50	ENSMUST00000194673.6	ENSMUSG00000103954.6	Gm37721	chrY	lncRNA	predicted gene, 37721
chrY	22694031	22694521	-	22694035	22694521	A3SS	0.5	50	50	ENSMUST00000194673.6	ENSMUSG00000103954.6	Gm37721	chrY	lncRNA	predicted gene, 37721
chrY	22916088	22917529	-	22916088;22916799	22916616;22917529	ES	0.5	50	50	ENSMUST00000195188.6	ENSMUSG00000103812.6	Gm33954	chrY	lncRNA	predicted gene, 33954
chrY	22917710	22918198	-	22917714	22918198	A3SS	0.5	50	50	ENSMUST00000195188.6	ENSMUSG00000103812.6	Gm33954	chrY	lncRNA	predicted gene, 33954
chrY	23208186	23209627	-	23208186;23208897	23208714;23209627	ES	0.5	50	50	ENSMUST00000192516.6	ENSMUSG00000104062.6	Gm37952	chrY	lncRNA	predicted gene, 37952
chrY	23209808	23210298	-	23209812	23210298	A3SS	0.5	50	50	ENSMUST00000192516.6	ENSMUSG00000104062.6	Gm37952	chrY	lncRNA	predicted gene, 37952
chrY	23495027	23496470	-	23495027;23495737	23495554;23496470	ES	0.5	50	50	ENSMUST00000193918.6	ENSMUSG00000104289.6	Gm37454	chrY	lncRNA	predicted gene, 37454
chrY	23496651	23497134	-	23496655	23497134	A3SS	0.5	50	50	ENSMUST00000193918.6	ENSMUSG00000104289.6	Gm37454	chrY	lncRNA	predicted gene, 37454
chrY	23713467	23714907	-	23713467;23714177	23713995;23714907	ES	0.5	50	50	ENSMUST00000194805.6	ENSMUSG00000103589.6	Gm37840	chrY	lncRNA	predicted gene, 37840
chrY	23715088	23715578	-	23715092	23715578	A3SS	0.5	50	50	ENSMUST00000194805.6	ENSMUSG00000103589.6	Gm37840	chrY	lncRNA	predicted gene, 37840
chrY	24006961	24008401	-	24006961;24007671	24007488;24008401	ES	0.5	50	50	ENSMUST00000195020.6	ENSMUSG00000103029.6	Gm37687	chrY	lncRNA	predicted gene, 37687
chrY	24008582	24009072	-	24008586	24009072	A3SS	0.5	50	50	ENSMUST00000195020.6	ENSMUSG00000103029.6	Gm37687	chrY	lncRNA	predicted gene, 37687
chrY	24229341	24230781	-	24229341;24230051	24229868;24230781	ES	0.5	50	50	ENSMUST00000194949.6	ENSMUSG00000104500.6	Gm36345	chrY	lncRNA	predicted gene, 36345
chrY	24230962	24231452	-	24230966	24231452	A3SS	0.5	50	50	ENSMUST00000194949.6	ENSMUSG00000104500.6	Gm36345	chrY	lncRNA	predicted gene, 36345
chrY	24520164	24521604	-	24520164;24520874	24520691;24521604	ES	0.5	50	50	ENSMUST00000194239.6	ENSMUSG00000102350.6	Gm37434	chrY	lncRNA	predicted gene, 37434
chrY	24521785	24522275	-	24521789	24522275	A3SS	0.5	50	50	ENSMUST00000194239.6	ENSMUSG00000102350.6	Gm37434	chrY	lncRNA	predicted gene, 37434
chrY	24742451	24743892	-	24742451;24743162	24742979;24743892	ES	0.5	50	50	ENSMUST00000193438.6	ENSMUSG00000103615.6	Gm30045	chrY	lncRNA	predicted gene, 30045
chrY	24744073	24744563	-	24744077	24744563	A3SS	0.5	50	50	ENSMUST00000193438.6	ENSMUSG00000103615.6	Gm30045	chrY	lncRNA	predicted gene, 30045
chrY	25033174	25034614	-	25033174;25033884	25033701;25034614	ES	0.5	50	50	ENSMUST00000195814.6	ENSMUSG00000103977.6	Gm37071	chrY	lncRNA	predicted gene, 37071
chrY	25034795	25035285	-	25034799	25035285	A3SS	0.5	50	50	ENSMUST00000195814.6	ENSMUSG00000103977.6	Gm37071	chrY	lncRNA	predicted gene, 37071
chrY	25255580	25257021	-	25255580;25256291	25256108;25257021	ES	0.5	50	50	ENSMUST00000195660.6	ENSMUSG00000103660.6	Gm30705	chrY	lncRNA	predicted gene, 30705
chrY	25257202	25257692	-	25257206	25257692	A3SS	0.5	50	50	ENSMUST00000195660.6	ENSMUSG00000103660.6	Gm30705	chrY	lncRNA	predicted gene, 30705
chrY	25546251	25547691	-	25546251;25546961	25546778;25547691	ES	0.5	50	50	ENSMUST00000192101.6	ENSMUSG00000102576.6	Gm37875	chrY	lncRNA	predicted gene, 37875
chrY	25547872	25548362	-	25547876	25548362	A3SS	0.5	50	50	ENSMUST00000192101.6	ENSMUSG00000102576.6	Gm37875	chrY	lncRNA	predicted gene, 37875
chrY	25768624	25770065	-	25768624;25769335	25769152;25770065	ES	0.5	50	50	ENSMUST00000195198.6	ENSMUSG00000103813.6	Gm31422	chrY	lncRNA	predicted gene, 31422
chrY	25770246	25770736	-	25770250	25770736	A3SS	0.5	50	50	ENSMUST00000195198.6	ENSMUSG00000103813.6	Gm31422	chrY	lncRNA	predicted gene, 31422
chrY	26059374	26060814	-	26059374;26060084	26059901;26060814	ES	0.5	50	50	ENSMUST00000191665.6	ENSMUSG00000102977.6	Gm37346	chrY	lncRNA	predicted gene, 37346
chrY	26060995	26061485	-	26060999	26061485	A3SS	0.5	50	50	ENSMUST00000191665.6	ENSMUSG00000102977.6	Gm37346	chrY	lncRNA	predicted gene, 37346
chrY	26281758	26283199	-	26281758;26282469	26282286;26283199	ES	0.5	50	50	ENSMUST00000194268.6	ENSMUSG00000103462.6	Gm32181	chrY	lncRNA	predicted gene, 32181
chrY	26283380	26283870	-	26283384	26283870	A3SS	0.5	50	50	ENSMUST00000194268.6	ENSMUSG00000103462.6	Gm32181	chrY	lncRNA	predicted gene, 32181
chrY	26566292	26567732	-	26566292;26567002	26566819;26567732	ES	0.5	50	50	ENSMUST00000188084.7	ENSMUSG00000101513.7	Gm28853	chrY	lncRNA	predicted gene 28853
chrY	26567913	26568403	-	26567917	26568403	A3SS	0.5	50	50	ENSMUST00000188084.7	ENSMUSG00000101513.7	Gm28853	chrY	lncRNA	predicted gene 28853
chrY	26791461	26792902	-	26791461;26792172	26791989;26792902	ES	0.5	50	50	ENSMUST00000191551.7	ENSMUSG00000101929.7	Gm28245	chrY	lncRNA	predicted gene 28245
chrY	26793083	26793573	-	26793087	26793573	A3SS	0.5	50	50	ENSMUST00000191551.7	ENSMUSG00000101929.7	Gm28245	chrY	lncRNA	predicted gene 28245
chrY	27021759	27023200	-	27021759;27022470	27022287;27023200	ES	0.5	50	50	ENSMUST00000190011.7	ENSMUSG00000101743.7	Gm28249	chrY	lncRNA	predicted gene 28249
chrY	27023381	27023871	-	27023385	27023871	A3SS	0.5	50	50	ENSMUST00000190011.7	ENSMUSG00000101743.7	Gm28249	chrY	lncRNA	predicted gene 28249
chrY	27311377	27312817	-	27311377;27312087	27311904;27312817	ES	0.5	50	50	ENSMUST00000185451.7	ENSMUSG00000101198.7	Gm29021	chrY	lncRNA	predicted gene 29021
chrY	27312998	27313488	-	27313002	27313488	A3SS	0.5	50	50	ENSMUST00000185451.7	ENSMUSG00000101198.7	Gm29021	chrY	lncRNA	predicted gene 29021
chrY	27536583	27538024	-	27536583;27537294	27537111;27538024	ES	0.5	50	50	ENSMUST00000190183.7	ENSMUSG00000101920.7	Gm28454	chrY	lncRNA	predicted gene 28454
chrY	27538205	27538695	-	27538209	27538695	A3SS	0.5	50	50	ENSMUST00000190183.7	ENSMUSG00000101920.7	Gm28454	chrY	lncRNA	predicted gene 28454
chrY	27766853	27768294	-	27766853;27767564	27767381;27768294	ES	0.5	50	50	ENSMUST00000187292.7	ENSMUSG00000100570.7	Gm29399	chrY	lncRNA	predicted gene 29399
chrY	27768475	27768965	-	27768479	27768965	A3SS	0.5	50	50	ENSMUST00000187292.7	ENSMUSG00000100570.7	Gm29399	chrY	lncRNA	predicted gene 29399
chrY	28286111	28287552	-	28286111;28286822	28286639;28287552	ES	0.5	50	50	ENSMUST00000187029.7	ENSMUSG00000099537.7	Gm28938	chrY	lncRNA	predicted gene 28938
chrY	28287733	28288223	-	28287737	28288223	A3SS	0.5	50	50	ENSMUST00000187029.7	ENSMUSG00000099537.7	Gm28938	chrY	lncRNA	predicted gene 28938
chrY	28580548	28581988	-	28580548;28581258	28581075;28581988	ES	0.5	50	50	ENSMUST00000189609.7	ENSMUSG00000101192.7	Gm29122	chrY	lncRNA	predicted gene 29122
chrY	28582169	28582659	-	28582173	28582659	A3SS	0.5	50	50	ENSMUST00000189609.7	ENSMUSG00000101192.7	Gm29122	chrY	lncRNA	predicted gene 29122
chrY	28801777;28802490	28802306;28803218	-	28801777	28803218	cassetteExon	0.5	100	100	ENSMUST00000189280.7	ENSMUSG00000100859.7	Gm28725	chrY	lncRNA	predicted gene 28725
chrY	28864410	28865852	-	28864410;28865123	28864939;28865852	ES	0.5	50	50	ENSMUST00000191071.7	ENSMUSG00000100875.7	Gm28987	chrY	lncRNA	predicted gene 28987
chrY	29112910	29114352	+	29112910;29113823	29113639;29114352	ES	0.5	50	50	ENSMUST00000186273.7	ENSMUSG00000099650.7	Gm28129	chrY	lncRNA	predicted gene 28129
chrY	29175891	29177333	+	29175891;29176804	29176620;29177333	ES	0.5	50	50	ENSMUST00000185293.7	ENSMUSG00000101560.7	Gm28127	chrY	lncRNA	predicted gene 28127
chrY	29514494	29515934	-	29514494;29515206	29515023;29515934	ES	0.5	50	50	ENSMUST00000186321.7	ENSMUSG00000099380.7	Gm28130	chrY	lncRNA	predicted gene 28130
chrY	29516115	29516603	-	29516119	29516603	A3SS	0.5	50	50	ENSMUST00000186321.7	ENSMUSG00000099380.7	Gm28130	chrY	lncRNA	predicted gene 28130
chrY	29543512	29544950	-	29543512;29544220	29544040;29544950	ES	0.5	50	50	ENSMUST00000187841.7	ENSMUSG00000101412.7	Gm28131	chrY	lncRNA	predicted gene 28131
chrY	29545128	29545617	-	29545132	29545617	A3SS	0.5	50	50	ENSMUST00000187841.7	ENSMUSG00000101412.7	Gm28131	chrY	lncRNA	predicted gene 28131
chrY	29610908;29611779	29611662;29626601	-	29610908	29626601	cassetteExon	0.5	100	100	ENSMUST00000238708.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29626635;29627250	29627184;29639923	-	29626635	29639923	cassetteExon	0.5	100	100	ENSMUST00000238708.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29626635;29638738	29638607;29639923	-	29626635	29639923	cassetteExon	0.5	100	100	ENSMUST00000238708.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29626635;29638741	29638607;29639923	-	29626635	29639923	cassetteExon	0.5	100	100	ENSMUST00000238708.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29626635;29639084	29638607;29639923	-	29626635	29639923	cassetteExon	0.5	100	100	ENSMUST00000238708.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29584078	29608698	-	29565993	29608698	A3SS	0.33	50	50	ENSMUST00000238708.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29584078	29626601	-	29610908	29626601	A3SS&ES	0.16	50	50	ENSMUST00000238708.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29608339	29608698	-	29565993	29608698	A3SS	0.33	50	50	ENSMUST00000238708.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29608791	29610809	-	29608796	29610809	A3SS	0.5	50	50	ENSMUST00000238708.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29618953	29626601	-	29610908	29626601	A3SS	0.16	50	50	ENSMUST00000238708.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29619581	29626601	-	29610908	29626601	A3SS	0.16	50	50	ENSMUST00000238708.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29625602	29626601	-	29610908	29626601	A3SS	0.16	50	50	ENSMUST00000238708.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29629048	29639923	-	29626635	29639923	A3SS	0.16	50	50	ENSMUST00000238708.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29610908	29616944	-	29610908	29626601	A5SS	0.33	50	50	ENSMUST00000238708.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29610908	29616944	-	29610908;29611779	29611662;29616944	ES	0.5	50	50	ENSMUST00000179330.3	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29618953	29626601	-	29618953;29619581	29619515;29626601	ES	0.16	50	50	ENSMUST00000179330.3	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29626635	29638607	-	29626635;29627250	29627184;29638607	ES	0.5	50	50	ENSMUST00000179330.3	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29627250	29639923	-	29627250;29638738	29638607;29639923	ES	0.16	50	50	ENSMUST00000179330.3	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29619581;29625602	29625492;29626601	-	29619581	29626601	cassetteExon	0.5	100	100	ENSMUST00000179330.3	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29627250;29629048	29628981;29639923	-	29627250;29638738	29638607;29639923	MXE	0.5	100	100	ENSMUST00000179330.3	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29608339	29608698	-	29584078	29608698	A3SS	0.33	50	50	ENSMUST00000179330.3	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29638741	29639923	-	29638738	29639923	A3SS	0.16	50	50	ENSMUST00000179330.3	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29639084	29639923	-	29638738	29639923	A3SS	0.16	50	50	ENSMUST00000179330.3	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29584078	29587461	-	29584078	29608698	A5SS	0.33	50	50	ENSMUST00000179330.3	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29611779	29616844	-	29611779	29616944	A5SS	0.33	50	50	ENSMUST00000179330.3	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29627250	29639639	-	29627250	29638607	A5SS&ES	0.25	50	50	ENSMUST00000179330.3	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29618953	29626601	-	29611779	29626601	A3SS	0.16	50	50	ENSMUST00000180373.3	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29619581	29626601	-	29611779	29626601	A3SS	0.16	50	50	ENSMUST00000180373.3	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29625602	29626601	-	29611779	29626601	A3SS	0.16	50	50	ENSMUST00000180373.3	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29610908	29616944	-	29610908	29611662	A5SS&ES	0.33	50	50	ENSMUST00000180373.3	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29611779	29616844	-	29611779	29626601	A5SS	0.33	50	50	ENSMUST00000180373.3	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29611779	29616944	-	29611779	29626601	A5SS	0.33	50	50	ENSMUST00000180373.3	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29638741	29639923	-	29638741;29639084	29638970;29639923	ES	0.16	50	50	ENSMUST00000238654.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29626635;29627250	29627184;29639923	-	29626635;29639084	29638607;29639923	MXE	0.5	100	100	ENSMUST00000238654.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29611779	29626601	-	29584078	29626601	A3SS	0.16	50	50	ENSMUST00000238654.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29618953	29626601	-	29584078	29626601	A3SS	0.16	50	50	ENSMUST00000238654.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29619581	29626601	-	29584078	29626601	A3SS	0.16	50	50	ENSMUST00000238654.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29625602	29626601	-	29584078	29626601	A3SS	0.16	50	50	ENSMUST00000238654.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29629048	29639923	-	29639084	29639923	A3SS&ES	0.16	50	50	ENSMUST00000238654.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29584078	29587461	-	29584078	29626601	A5SS	0.33	50	50	ENSMUST00000238654.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29584078	29608698	-	29584078	29626601	A5SS	0.33	50	50	ENSMUST00000238654.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29626635;29627250	29627184;29639923	-	29626635;29638741	29638607;29639923	MXE	0.5	100	100	ENSMUST00000238537.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29629048	29639923	-	29638741	29639923	A3SS&ES	0.16	50	50	ENSMUST00000238537.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29626635;29627250	29627184;29639923	-	29626635;29638738	29638607;29639923	MXE	0.5	100	100	ENSMUST00000238742.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29629048	29639923	-	29638738	29639923	A3SS&ES	0.16	50	50	ENSMUST00000238742.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29627250	29639923	-	29627250;29629048	29628981;29639923	ES	0.16	50	50	ENSMUST00000238469.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29629048	29640101	-	29629048	29639923	5pMXE	0.5	50	50	ENSMUST00000238469.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29626635;29638738	29638607;29639923	-	29626635;29629048	29627184;29639923	MXE	0.5	100	100	ENSMUST00000238469.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29626635;29638741	29638607;29639923	-	29626635;29629048	29627184;29639923	MXE	0.5	100	100	ENSMUST00000238469.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29627250;29638741	29638607;29639923	-	29627250;29629048	29628981;29639923	MXE	0.5	100	100	ENSMUST00000238469.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29626635;29639084	29638607;29639923	-	29626635;29629048	29627184;29639923	MXE	0.5	100	100	ENSMUST00000238469.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29627250;29639084	29638607;29639923	-	29627250;29629048	29628981;29639923	MXE	0.5	100	100	ENSMUST00000238469.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29627250	29639639	-	29627250	29628981	A5SS&ES	0.25	50	50	ENSMUST00000238469.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29627250	29640101	-	29627250	29639923	5pMXE	0.2	50	50	ENSMUST00000238371.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29627250;29638741	29638607;29639923	-	29627250	29639923	cassetteExon	0.5	100	100	ENSMUST00000238371.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29627250;29639084	29638607;29639923	-	29627250	29639923	cassetteExon	0.5	100	100	ENSMUST00000238371.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29608339	29608727	-	29587558	29608727	A3SS	0.5	50	50	ENSMUST00000238371.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29627250	29639639	-	29627250	29639923	A5SS	0.2	50	50	ENSMUST00000238371.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29610908;29611779	29611662;29626601	-	29610908;29619581	29616944;29626601	MXE	0.5	100	100	ENSMUST00000238464.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29625602	29626601	-	29618953	29626601	A3SS	0.16	50	50	ENSMUST00000238766.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29610908;29611779	29611662;29626601	-	29610908;29618953	29616944;29626601	MXE	0.5	100	100	ENSMUST00000238234.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29608339	29608698	-	29608339	29608727	A5SS	0.5	50	50	ENSMUST00000238231.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29610908	29626601	-	29610908	29611662	5pMXE	0.33	50	50	ENSMUST00000238363.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29627250	29640101	-	29627250;29629048	29628981;29640101	ES	0.5	50	50	ENSMUST00000238567.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29626635	29638607	-	29626635	29627184	A5SS&ES	0.33	50	50	ENSMUST00000238567.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29626635	29639923	-	29626635	29627184	A5SS&ES	0.33	50	50	ENSMUST00000238567.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29627250	29638607	-	29627250	29628981	A5SS&ES	0.2	50	50	ENSMUST00000238567.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29627250	29639923	-	29627250	29628981	A5SS&ES	0.2	50	50	ENSMUST00000238567.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29627250	29638607	-	29627250	29640101	A5SS	0.2	50	50	ENSMUST00000238647.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	29627250	29639639	-	29627250	29640101	A5SS	0.2	50	50	ENSMUST00000238647.2	ENSMUSG00000118461.2	Gm21679	chrY	transcribed_unprocessed_pseudogene	predicted gene, 21679
chrY	30111437	30112875	+	30111437;30112350	30112166;30112875	ES	0.5	50	50	ENSMUST00000185844.7	ENSMUSG00000101642.7	Gm29315	chrY	lncRNA	predicted gene 29315
chrY	30379766;30380678	30380494;30381207	+	30379766	30381207	cassetteExon	0.5	100	100	ENSMUST00000190912.7	ENSMUSG00000100565.7	Gm28091	chrY	lncRNA	predicted gene 28091
chrY	30568987	30570427	-	30568987;30569699	30569516;30570427	ES	0.5	50	50	ENSMUST00000187266.7	ENSMUSG00000100415.7	Gm28089	chrY	lncRNA	predicted gene 28089
chrY	30570608	30571096	-	30570612	30571096	A3SS	0.5	50	50	ENSMUST00000187266.7	ENSMUSG00000100415.7	Gm28089	chrY	lncRNA	predicted gene 28089
chrY	30597921	30599359	-	30597921;30598629	30598449;30599359	ES	0.5	50	50	ENSMUST00000187402.7	ENSMUSG00000101775.7	Gm28088	chrY	lncRNA	predicted gene 28088
chrY	30599537	30600026	-	30599541	30600026	A3SS	0.5	50	50	ENSMUST00000187402.7	ENSMUSG00000101775.7	Gm28088	chrY	lncRNA	predicted gene 28088
chrY	30836715	30838157	-	30836715;30837428	30837244;30838157	ES	0.5	50	50	ENSMUST00000186083.7	ENSMUSG00000100311.7	Gm29581	chrY	lncRNA	predicted gene 29581
chrY	30899213	30900654	-	30899213;30899925	30899741;30900654	ES	0.5	50	50	ENSMUST00000188809.7	ENSMUSG00000099990.7	Gm29578	chrY	lncRNA	predicted gene 29578
chrY	31246580;31247490	31247307;31248019	+	31246580	31248019	cassetteExon	0.5	100	100	ENSMUST00000190984.7	ENSMUSG00000099855.7	Gm28486	chrY	lncRNA	predicted gene 28486
chrY	31405356	31406793	+	31405356;31406265	31406085;31406793	ES	0.5	50	50	ENSMUST00000187894.7	ENSMUSG00000100928.7	Gm28487	chrY	lncRNA	predicted gene 28487
chrY	31404689	31405178	+	31404689	31405174	A3SS	0.5	50	50	ENSMUST00000187894.7	ENSMUSG00000100928.7	Gm28487	chrY	lncRNA	predicted gene 28487
chrY	31465257	31466697	-	31465257;31465969	31465786;31466697	ES	0.5	50	50	ENSMUST00000188792.7	ENSMUSG00000099695.7	Gm28488	chrY	lncRNA	predicted gene 28488
chrY	31466878	31467366	-	31466882	31467366	A3SS	0.5	50	50	ENSMUST00000188792.7	ENSMUSG00000099695.7	Gm28488	chrY	lncRNA	predicted gene 28488
chrY	31494172	31495610	-	31494172;31494880	31494700;31495610	ES	0.5	50	50	ENSMUST00000186902.7	ENSMUSG00000100399.7	Gm28491	chrY	lncRNA	predicted gene 28491
chrY	31495788	31496277	-	31495792	31496277	A3SS	0.5	50	50	ENSMUST00000186902.7	ENSMUSG00000100399.7	Gm28491	chrY	lncRNA	predicted gene 28491
chrY	31732951;31733664	31733480;31734393	-	31732951	31734393	cassetteExon	0.5	100	100	ENSMUST00000190443.7	ENSMUSG00000101423.7	Gm28298	chrY	lncRNA	predicted gene 28298
chrY	31795425;31796137	31795953;31796866	-	31795425	31796866	cassetteExon	0.5	100	100	ENSMUST00000190933.7	ENSMUSG00000101761.7	Gm28297	chrY	lncRNA	predicted gene 28297
chrY	32137833	32139274	+	32137833;32138745	32138561;32139274	ES	0.5	50	50	ENSMUST00000186151.7	ENSMUSG00000100739.7	Gm28296	chrY	lncRNA	predicted gene 28296
chrY	32200257	32201698	+	32200257;32201169	32200985;32201698	ES	0.5	50	50	ENSMUST00000188322.7	ENSMUSG00000100709.7	Gm28295	chrY	lncRNA	predicted gene 28295
chrY	32261245	32262686	+	32261245;32262157	32261973;32262686	ES	0.5	50	50	ENSMUST00000186892.7	ENSMUSG00000101779.7	Gm28170	chrY	lncRNA	predicted gene 28170
chrY	32450235	32451675	-	32450235;32450947	32450764;32451675	ES	0.5	50	50	ENSMUST00000191194.7	ENSMUSG00000101745.7	Gm28764	chrY	lncRNA	predicted gene 28764
chrY	32451856	32452344	-	32451860	32452344	A3SS	0.5	50	50	ENSMUST00000191194.7	ENSMUSG00000101745.7	Gm28764	chrY	lncRNA	predicted gene 28764
chrY	32479179	32480616	-	32479179;32479887	32479707;32480616	ES	0.5	50	50	ENSMUST00000191259.7	ENSMUSG00000100957.7	Gm28762	chrY	lncRNA	predicted gene 28762
chrY	32480794	32481283	-	32480798	32481283	A3SS	0.5	50	50	ENSMUST00000191259.7	ENSMUSG00000100957.7	Gm28762	chrY	lncRNA	predicted gene 28762
chrY	32709999	32711441	-	32709999;32710712	32710528;32711441	ES	0.5	50	50	ENSMUST00000186540.7	ENSMUSG00000099426.7	Gm28761	chrY	lncRNA	predicted gene 28761
chrY	32772434	32773875	-	32772434;32773146	32772962;32773875	ES	0.5	50	50	ENSMUST00000189752.7	ENSMUSG00000101728.7	Gm28765	chrY	lncRNA	predicted gene 28765
chrY	33119799	33121238	+	33119799;33120709	33120526;33121238	ES	0.5	50	50	ENSMUST00000185427.7	ENSMUSG00000101099.7	Gm29191	chrY	lncRNA	predicted gene 29191
chrY	33278395	33279832	+	33278395;33279304	33279124;33279832	ES	0.5	50	50	ENSMUST00000188026.7	ENSMUSG00000101516.7	Gm29074	chrY	lncRNA	predicted gene 29074
chrY	33277728	33278217	+	33277728	33278213	A3SS	0.5	50	50	ENSMUST00000188026.7	ENSMUSG00000101516.7	Gm29074	chrY	lncRNA	predicted gene 29074
chrY	33338499	33339939	-	33338499;33339211	33339028;33339939	ES	0.5	50	50	ENSMUST00000188788.7	ENSMUSG00000100790.7	Gm28518	chrY	lncRNA	predicted gene 28518
chrY	33340120	33340608	-	33340124	33340608	A3SS	0.5	50	50	ENSMUST00000188788.7	ENSMUSG00000100790.7	Gm28518	chrY	lncRNA	predicted gene 28518
chrY	33367437	33368875	-	33367437;33368145	33367965;33368875	ES	0.5	50	50	ENSMUST00000190126.7	ENSMUSG00000101302.7	Gm28519	chrY	lncRNA	predicted gene 28519
chrY	33369053	33369542	-	33369057	33369542	A3SS	0.5	50	50	ENSMUST00000190126.7	ENSMUSG00000101302.7	Gm28519	chrY	lncRNA	predicted gene 28519
chrY	33401861	33403299	-	33401861;33402569	33402389;33403299	ES	0.5	50	50	ENSMUST00000189379.7	ENSMUSG00000102125.7	Gm28520	chrY	lncRNA	predicted gene 28520
chrY	33403477	33403966	-	33403481	33403966	A3SS	0.5	50	50	ENSMUST00000189379.7	ENSMUSG00000102125.7	Gm28520	chrY	lncRNA	predicted gene 28520
chrY	33633040;33633753	33633569;33634482	-	33633040	33634482	cassetteExon	0.5	100	100	ENSMUST00000190230.7	ENSMUSG00000099461.7	Gm28521	chrY	lncRNA	predicted gene 28521
chrY	33695624	33697065	-	33695624;33696336	33696152;33697065	ES	0.5	50	50	ENSMUST00000190561.7	ENSMUSG00000101681.7	Gm28522	chrY	lncRNA	predicted gene 28522
chrY	34042580	34044022	+	34042580;34043493	34043309;34044022	ES	0.5	50	50	ENSMUST00000185593.7	ENSMUSG00000101407.7	Gm29532	chrY	lncRNA	predicted gene 29532
chrY	34105054;34105966	34105782;34106495	+	34105054	34106495	cassetteExon	0.5	100	100	ENSMUST00000188929.7	ENSMUSG00000100097.7	Gm28464	chrY	lncRNA	predicted gene 28464
chrY	34165569	34167010	+	34165569;34166481	34166297;34167010	ES	0.5	50	50	ENSMUST00000187728.7	ENSMUSG00000099737.7	Gm29655	chrY	lncRNA	predicted gene 29655
chrY	34625967	34627408	-	34625967;34626678	34626495;34627408	ES	0.5	50	50	ENSMUST00000190140.7	ENSMUSG00000099463.7	Gm29081	chrY	lncRNA	predicted gene 29081
chrY	34627589	34628079	-	34627593	34628079	A3SS	0.5	50	50	ENSMUST00000190140.7	ENSMUSG00000099463.7	Gm29081	chrY	lncRNA	predicted gene 29081
chrY	34919691	34921131	-	34919691;34920401	34920218;34921131	ES	0.5	50	50	ENSMUST00000188647.7	ENSMUSG00000099390.7	Gm29225	chrY	lncRNA	predicted gene 29225
chrY	34921312	34921802	-	34921316	34921802	A3SS	0.5	50	50	ENSMUST00000188647.7	ENSMUSG00000099390.7	Gm29225	chrY	lncRNA	predicted gene 29225
chrY	35146579	35148020	-	35146579;35147290	35147107;35148020	ES	0.5	50	50	ENSMUST00000191185.7	ENSMUSG00000101626.7	Gm29386	chrY	lncRNA	predicted gene 29386
chrY	35148201	35148691	-	35148205	35148691	A3SS	0.5	50	50	ENSMUST00000191185.7	ENSMUSG00000101626.7	Gm29386	chrY	lncRNA	predicted gene 29386
chrY	35414279	35415720	-	35414279;35414990	35414807;35415720	ES	0.5	50	50	ENSMUST00000187337.7	ENSMUSG00000099799.7	Gm28260	chrY	lncRNA	predicted gene 28260
chrY	35415901	35416391	-	35415905	35416391	A3SS	0.5	50	50	ENSMUST00000187337.7	ENSMUSG00000099799.7	Gm28260	chrY	lncRNA	predicted gene 28260
chrY	35717619	35719058	-	35717619;35718329	35718146;35719058	ES	0.5	50	50	ENSMUST00000191085.7	ENSMUSG00000099963.7	Gm28463	chrY	lncRNA	predicted gene 28463
chrY	35719239	35719722	-	35719243	35719722	A3SS	0.5	50	50	ENSMUST00000191085.7	ENSMUSG00000099963.7	Gm28463	chrY	lncRNA	predicted gene 28463
chrY	35936795	35938235	-	35936795;35937505	35937323;35938235	ES	0.5	50	50	ENSMUST00000186912.7	ENSMUSG00000102058.7	Gm28470	chrY	lncRNA	predicted gene 28470
chrY	35938416	35938906	-	35938420	35938906	A3SS	0.5	50	50	ENSMUST00000186912.7	ENSMUSG00000102058.7	Gm28470	chrY	lncRNA	predicted gene 28470
chrY	36228996	36230436	-	36228996;36229706	36229523;36230436	ES	0.5	50	50	ENSMUST00000191389.7	ENSMUSG00000099822.7	Gm28332	chrY	lncRNA	predicted gene 28332
chrY	36230617	36231107	-	36230621	36231107	A3SS	0.5	50	50	ENSMUST00000191389.7	ENSMUSG00000099822.7	Gm28332	chrY	lncRNA	predicted gene 28332
chrY	36451544	36452985	-	36451544;36452255	36452072;36452985	ES	0.5	50	50	ENSMUST00000186269.7	ENSMUSG00000099814.7	Gm28338	chrY	lncRNA	predicted gene 28338
chrY	36453166	36453656	-	36453170	36453656	A3SS	0.5	50	50	ENSMUST00000186269.7	ENSMUSG00000099814.7	Gm28338	chrY	lncRNA	predicted gene 28338
chrY	36749943	36751384	-	36749943;36750654	36750471;36751384	ES	0.5	50	50	ENSMUST00000187571.7	ENSMUSG00000100647.7	Gm29027	chrY	lncRNA	predicted gene 29027
chrY	36751565	36752055	-	36751569	36752055	A3SS	0.5	50	50	ENSMUST00000187571.7	ENSMUSG00000100647.7	Gm29027	chrY	lncRNA	predicted gene 29027
chrY	37503161	37504601	-	37503161;37503871	37503688;37504601	ES	0.5	50	50	ENSMUST00000188530.2	ENSMUSG00000101879.2	Gm28820	chrY	lncRNA	predicted gene 28820
chrY	37504782	37505272	-	37504786	37505272	A3SS	0.5	50	50	ENSMUST00000188530.2	ENSMUSG00000101879.2	Gm28820	chrY	lncRNA	predicted gene 28820
chrY	38022875	38024315	-	38022875;38023585	38023402;38024315	ES	0.5	50	50	ENSMUST00000188667.2	ENSMUSG00000100952.2	Gm28545	chrY	lncRNA	predicted gene 28545
chrY	38024496	38024986	-	38024500	38024986	A3SS	0.5	50	50	ENSMUST00000188667.2	ENSMUSG00000100952.2	Gm28545	chrY	lncRNA	predicted gene 28545
chrY	38295919	38297359	-	38295919;38296629	38296446;38297359	ES	0.5	50	50	ENSMUST00000189399.2	ENSMUSG00000099807.2	Gm28771	chrY	lncRNA	predicted gene 28771
chrY	38297540	38298030	-	38297544	38298030	A3SS	0.5	50	50	ENSMUST00000189399.2	ENSMUSG00000099807.2	Gm28771	chrY	lncRNA	predicted gene 28771
chrY	38516896	38518336	-	38516896;38517606	38517423;38518336	ES	0.5	50	50	ENSMUST00000187087.2	ENSMUSG00000101050.2	Gm28774	chrY	lncRNA	predicted gene 28774
chrY	38518517	38519007	-	38518521	38519007	A3SS	0.5	50	50	ENSMUST00000187087.2	ENSMUSG00000101050.2	Gm28774	chrY	lncRNA	predicted gene 28774
chrY	38828048	38829489	-	38828048;38828761	38828577;38829489	ES	0.5	50	50	ENSMUST00000185322.7	ENSMUSG00000101771.7	Gm28176	chrY	lncRNA	predicted gene 28176
chrY	38890517	38891959	-	38890517;38891230	38891046;38891959	ES	0.5	50	50	ENSMUST00000185625.7	ENSMUSG00000101740.7	Gm29360	chrY	lncRNA	predicted gene 29360
chrY	39114681	39116118	-	39114681;39115392	39115209;39116118	ES	0.5	50	50	ENSMUST00000186801.2	ENSMUSG00000100588.2	Gm29497	chrY	lncRNA	predicted gene 29497
chrY	39116299	39116787	-	39116303	39116787	A3SS	0.5	50	50	ENSMUST00000186801.2	ENSMUSG00000100588.2	Gm29497	chrY	lncRNA	predicted gene 29497
chrY	39367935	39369377	+	39367935;39368848	39368664;39369377	ES	0.5	50	50	ENSMUST00000186449.7	ENSMUSG00000101040.7	Gm29498	chrY	lncRNA	predicted gene 29498
chrY	40323130	40324573	-	40323130;40323843	40323659;40324573	ES	0.5	50	50	ENSMUST00000188659.7	ENSMUSG00000099786.7	Gm29215	chrY	lncRNA	predicted gene 29215
chrY	40387331	40388773	-	40387331;40388044	40387860;40388773	ES	0.5	50	50	ENSMUST00000189058.7	ENSMUSG00000100900.7	Gm28850	chrY	lncRNA	predicted gene 28850
chrY	40449901;40450615	40450431;40451343	-	40449901	40451343	cassetteExon	0.5	100	100	ENSMUST00000187191.7	ENSMUSG00000100508.7	Gm28617	chrY	lncRNA	predicted gene 28617
chrY	40594105	40595546	-	40594105;40594817	40594633;40595546	ES	0.5	50	50	ENSMUST00000185889.7	ENSMUSG00000101090.7	Gm28619	chrY	lncRNA	predicted gene 28619
chrY	40689576	40691014	-	40689576;40690286	40690103;40691014	ES	0.5	50	50	ENSMUST00000186236.2	ENSMUSG00000099379.2	Gm28993	chrY	lncRNA	predicted gene 28993
chrY	40691195	40691683	-	40691199	40691683	A3SS	0.5	50	50	ENSMUST00000186236.2	ENSMUSG00000099379.2	Gm28993	chrY	lncRNA	predicted gene 28993
chrY	40717917	40719356	-	40717917;40718628	40718445;40719356	ES	0.5	50	50	ENSMUST00000188556.7	ENSMUSG00000100070.7	Gm28994	chrY	lncRNA	predicted gene 28994
chrY	41373634;41374546	41374364;41375074	+	41373634	41375074	cassetteExon	0.5	100	100	ENSMUST00000189840.7	ENSMUSG00000099897.7	Gm28426	chrY	lncRNA	predicted gene 28426
chrY	41402021	41403459	+	41402021;41402932	41402749;41403459	ES	0.5	50	50	ENSMUST00000191542.7	ENSMUSG00000099785.7	Gm28425	chrY	lncRNA	predicted gene 28425
chrY	41722247	41723688	-	41722247;41722960	41722776;41723688	ES	0.5	50	50	ENSMUST00000190714.6	ENSMUSG00000101536.7	Gm28834	chrY	lncRNA	predicted gene 28834
chrY	42098207	42099643	+	42098207;42099115	42098932;42099643	ES	0.5	50	50	ENSMUST00000186153.2	ENSMUSG00000099780.2	Gm29537	chrY	lncRNA	predicted gene 29537
chrY	42097538	42098026	+	42097538	42098022	A3SS	0.5	50	50	ENSMUST00000186153.2	ENSMUSG00000099780.2	Gm29537	chrY	lncRNA	predicted gene 29537
chrY	42415391	42416833	-	42415391;42416103	42415920;42416833	ES	0.5	50	50	ENSMUST00000188814.2	ENSMUSG00000099849.2	Gm29274	chrY	lncRNA	predicted gene 29274
chrY	42417014	42417502	-	42417018	42417502	A3SS	0.5	50	50	ENSMUST00000188814.2	ENSMUSG00000099849.2	Gm29274	chrY	lncRNA	predicted gene 29274
chrY	42443478	42444920	-	42443478;42444189	42444006;42444920	ES	0.5	50	50	ENSMUST00000189475.2	ENSMUSG00000100822.2	Gm29275	chrY	lncRNA	predicted gene 29275
chrY	42445098	42445587	-	42445102	42445587	A3SS	0.5	50	50	ENSMUST00000189475.2	ENSMUSG00000100822.2	Gm29275	chrY	lncRNA	predicted gene 29275
chrY	43003343	43004783	-	43003343;43004055	43003872;43004783	ES	0.5	50	50	ENSMUST00000185236.2	ENSMUSG00000099408.2	Gm28311	chrY	lncRNA	predicted gene 28311
chrY	43004964	43005452	-	43004968	43005452	A3SS	0.5	50	50	ENSMUST00000185236.2	ENSMUSG00000099408.2	Gm28311	chrY	lncRNA	predicted gene 28311
chrY	43032233	43033671	-	43032233;43032941	43032761;43033671	ES	0.5	50	50	ENSMUST00000191136.2	ENSMUSG00000101207.2	Gm28310	chrY	lncRNA	predicted gene 28310
chrY	43033849	43034338	-	43033853	43034338	A3SS	0.5	50	50	ENSMUST00000191136.2	ENSMUSG00000101207.2	Gm28310	chrY	lncRNA	predicted gene 28310
chrY	43406967	43408405	-	43406967;43407678	43407495;43408405	ES	0.5	50	50	ENSMUST00000187762.2	ENSMUSG00000100051.2	Gm28568	chrY	lncRNA	predicted gene 28568
chrY	43408586	43409074	-	43408590	43409074	A3SS	0.5	50	50	ENSMUST00000187762.2	ENSMUSG00000100051.2	Gm28568	chrY	lncRNA	predicted gene 28568
chrY	43759214	43760656	+	43759214;43760127	43759943;43760656	ES	0.5	50	50	ENSMUST00000187736.7	ENSMUSG00000099977.7	Gm29286	chrY	lncRNA	predicted gene 29286
chrY	43821460	43822901	+	43821460;43822372	43822188;43822901	ES	0.5	50	50	ENSMUST00000188196.7	ENSMUSG00000100953.7	Gm28280	chrY	lncRNA	predicted gene 28280
chrY	44110441	44111879	-	44110441;44111151	44110968;44111879	ES	0.5	50	50	ENSMUST00000185603.2	ENSMUSG00000100693.2	Gm28278	chrY	lncRNA	predicted gene 28278
chrY	44112060	44112548	-	44112064	44112548	A3SS	0.5	50	50	ENSMUST00000185603.2	ENSMUSG00000100693.2	Gm28278	chrY	lncRNA	predicted gene 28278
chrY	44123958	44125396	-	44123958;44124666	44124486;44125396	ES	0.5	50	50	ENSMUST00000186248.2	ENSMUSG00000099638.2	Gm28279	chrY	lncRNA	predicted gene 28279
chrY	44125574	44126063	-	44125578	44126063	A3SS	0.5	50	50	ENSMUST00000186248.2	ENSMUSG00000099638.2	Gm28279	chrY	lncRNA	predicted gene 28279
chrY	44341325	44342767	-	44341325;44342038	44341854;44342767	ES	0.5	50	50	ENSMUST00000186564.7	ENSMUSG00000102031.7	Gm29426	chrY	lncRNA	predicted gene 29426
chrY	44777315	44778751	+	44777315;44778223	44778040;44778751	ES	0.5	50	50	ENSMUST00000187152.2	ENSMUSG00000101649.2	Gm29444	chrY	lncRNA	predicted gene 29444
chrY	44776646	44777134	+	44776646	44777130	A3SS	0.5	50	50	ENSMUST00000187152.2	ENSMUSG00000101649.2	Gm29444	chrY	lncRNA	predicted gene 29444
chrY	45000654	45002092	+	45000654;45001564	45001381;45002092	ES	0.5	50	50	ENSMUST00000189947.2	ENSMUSG00000101802.2	Gm29445	chrY	lncRNA	predicted gene 29445
chrY	44999985	45000473	+	44999985	45000469	A3SS	0.5	50	50	ENSMUST00000189947.2	ENSMUSG00000101802.2	Gm29445	chrY	lncRNA	predicted gene 29445
chrY	45182392	45183828	+	45182392;45183300	45183117;45183828	ES	0.5	50	50	ENSMUST00000191277.2	ENSMUSG00000099790.2	Gm28457	chrY	lncRNA	predicted gene 28457
chrY	45181723	45182211	+	45181723	45182207	A3SS	0.5	50	50	ENSMUST00000191277.2	ENSMUSG00000099790.2	Gm28457	chrY	lncRNA	predicted gene 28457
chrY	45405612	45407050	+	45405612;45406522	45406339;45407050	ES	0.5	50	50	ENSMUST00000190542.2	ENSMUSG00000100011.2	Gm28458	chrY	lncRNA	predicted gene 28458
chrY	45404943	45405431	+	45404943	45405427	A3SS	0.5	50	50	ENSMUST00000190542.2	ENSMUSG00000100011.2	Gm28458	chrY	lncRNA	predicted gene 28458
chrY	45767879;45768792	45768608;45769321	+	45767879	45769321	cassetteExon	0.5	100	100	ENSMUST00000186085.7	ENSMUSG00000100499.7	Gm28460	chrY	lncRNA	predicted gene 28460
chrY	45830234	45831675	+	45830234;45831146	45830962;45831675	ES	0.5	50	50	ENSMUST00000190521.7	ENSMUSG00000101003.7	Gm28456	chrY	lncRNA	predicted gene 28456
chrY	46580679	46582118	+	46580679;46581590	46581410;46582118	ES	0.5	50	50	ENSMUST00000191146.2	ENSMUSG00000100003.2	Gm29646	chrY	lncRNA	predicted gene 29646
chrY	46580012	46580501	+	46580012	46580497	A3SS	0.5	50	50	ENSMUST00000191146.2	ENSMUSG00000100003.2	Gm29646	chrY	lncRNA	predicted gene 29646
chrY	46609575	46611015	+	46609575;46610486	46610303;46611015	ES	0.5	50	50	ENSMUST00000191354.2	ENSMUSG00000099462.2	Gm28549	chrY	lncRNA	predicted gene 28549
chrY	46608906	46609394	+	46608906	46609390	A3SS	0.5	50	50	ENSMUST00000191354.2	ENSMUSG00000099462.2	Gm28549	chrY	lncRNA	predicted gene 28549
chrY	46852318	46853759	-	46852318;46853031	46852847;46853759	ES	0.5	50	50	ENSMUST00000186332.6	ENSMUSG00000101138.7	Gm29210	chrY	lncRNA	predicted gene 29210
chrY	46914703;46915416	46915232;46916145	-	46914703	46916145	cassetteExon	0.5	100	100	ENSMUST00000190596.7	ENSMUSG00000100716.7	Gm28550	chrY	lncRNA	predicted gene 28550
chrY	47257545	47258986	+	47257545;47258458	47258274;47258986	ES	0.5	50	50	ENSMUST00000186615.7	ENSMUSG00000099789.7	Gm28565	chrY	lncRNA	predicted gene 28565
chrY	47320025	47321467	+	47320025;47320938	47320754;47321467	ES	0.5	50	50	ENSMUST00000188821.7	ENSMUSG00000101109.7	Gm28697	chrY	lncRNA	predicted gene 28697
chrY	47550686	47552124	+	47550686;47551596	47551416;47552124	ES	0.5	50	50	ENSMUST00000187933.2	ENSMUSG00000100852.2	Gm29056	chrY	lncRNA	predicted gene 29056
chrY	47550019	47550508	+	47550019	47550504	A3SS	0.5	50	50	ENSMUST00000187933.2	ENSMUSG00000100852.2	Gm29056	chrY	lncRNA	predicted gene 29056
chrY	47579629	47581069	+	47579629;47580540	47580357;47581069	ES	0.5	50	50	ENSMUST00000186104.2	ENSMUSG00000099532.2	Gm29098	chrY	lncRNA	predicted gene 29098
chrY	47578960	47579448	+	47578960	47579444	A3SS	0.5	50	50	ENSMUST00000186104.2	ENSMUSG00000099532.2	Gm29098	chrY	lncRNA	predicted gene 29098
chrY	47837028	47838467	-	47837028;47837738	47837554;47838467	ES	0.5	50	50	ENSMUST00000190660.7	ENSMUSG00000102054.7	Gm29373	chrY	lncRNA	predicted gene 29373
chrY	48191115;48192027	48191843;48192555	+	48191115	48192555	cassetteExon	0.5	100	100	ENSMUST00000186716.7	ENSMUSG00000099674.7	Gm29166	chrY	lncRNA	predicted gene 29166
chrY	48411604	48413041	+	48411604;48412513	48412333;48413041	ES	0.5	50	50	ENSMUST00000188778.2	ENSMUSG00000100423.2	Gm28754	chrY	lncRNA	predicted gene 28754
chrY	48410937	48411426	+	48410937	48411422	A3SS	0.5	50	50	ENSMUST00000188778.2	ENSMUSG00000100423.2	Gm28754	chrY	lncRNA	predicted gene 28754
chrY	48440530	48441970	+	48440530;48441441	48441258;48441970	ES	0.5	50	50	ENSMUST00000187804.2	ENSMUSG00000100023.2	Gm28753	chrY	lncRNA	predicted gene 28753
chrY	48439861	48440349	+	48439861	48440345	A3SS	0.5	50	50	ENSMUST00000187804.2	ENSMUSG00000100023.2	Gm28753	chrY	lncRNA	predicted gene 28753
chrY	48792965	48794406	+	48792965;48793878	48793695;48794406	ES	0.5	50	50	ENSMUST00000188541.2	ENSMUSG00000099903.2	Gm29070	chrY	lncRNA	predicted gene 29070
chrY	48792294	48792784	+	48792294	48792780	A3SS	0.5	50	50	ENSMUST00000188541.2	ENSMUSG00000099903.2	Gm29070	chrY	lncRNA	predicted gene 29070
chrY	49024173	49025613	+	49024173;49025086	49024903;49025613	ES	0.5	50	50	ENSMUST00000190994.2	ENSMUSG00000100938.2	Gm28726	chrY	lncRNA	predicted gene 28726
chrY	49023502	49023992	+	49023502	49023988	A3SS	0.5	50	50	ENSMUST00000190994.2	ENSMUSG00000100938.2	Gm28726	chrY	lncRNA	predicted gene 28726
chrY	49506937	49508377	+	49506937;49507849	49507666;49508377	ES	0.5	50	50	ENSMUST00000189943.7	ENSMUSG00000101204.7	Gm29271	chrY	lncRNA	predicted gene 29271
chrY	49506266	49506756	+	49506266	49506752	A3SS	0.5	50	50	ENSMUST00000189943.7	ENSMUSG00000101204.7	Gm29271	chrY	lncRNA	predicted gene 29271
chrY	49575396	49582432	+	49575396	49590294	A3SS	0.5	50	50	ENSMUST00000178556.2	ENSMUSG00000095979.8	Gm21209	chrY	protein_coding	predicted gene, 21209
chrY	49583117	49590294	+	49575396	49590294	A5SS	0.5	50	50	ENSMUST00000178556.2	ENSMUSG00000095979.8	Gm21209	chrY	protein_coding	predicted gene, 21209
chrY	49730329	49731769	+	49730329;49731242	49731059;49731769	ES	0.5	50	50	ENSMUST00000185586.2	ENSMUSG00000100765.2	Gm28684	chrY	lncRNA	predicted gene 28684
chrY	49729658	49730148	+	49729658	49730144	A3SS	0.5	50	50	ENSMUST00000185586.2	ENSMUSG00000100765.2	Gm28684	chrY	lncRNA	predicted gene 28684
chrY	50026450	50027891	+	50026450;50027364	50027181;50027891	ES	0.5	50	50	ENSMUST00000186013.2	ENSMUSG00000100914.2	Gm28679	chrY	lncRNA	predicted gene 28679
chrY	50025779	50026269	+	50025779	50026265	A3SS	0.5	50	50	ENSMUST00000186013.2	ENSMUSG00000100914.2	Gm28679	chrY	lncRNA	predicted gene 28679
chrY	50256874	50258314	+	50256874;50257787	50257604;50258314	ES	0.5	50	50	ENSMUST00000187580.7	ENSMUSG00000099666.7	Gm29511	chrY	lncRNA	predicted gene 29511
chrY	50256203	50256693	+	50256203	50256689	A3SS	0.5	50	50	ENSMUST00000187580.7	ENSMUSG00000099666.7	Gm29511	chrY	lncRNA	predicted gene 29511
chrY	50542405	50543846	+	50542405;50543318	50543135;50543846	ES	0.5	50	50	ENSMUST00000190374.2	ENSMUSG00000100118.2	Gm29117	chrY	lncRNA	predicted gene 29117
chrY	50541734	50542224	+	50541734	50542220	A3SS	0.5	50	50	ENSMUST00000190374.2	ENSMUSG00000100118.2	Gm29117	chrY	lncRNA	predicted gene 29117
chrY	50767933	50769373	+	50767933;50768846	50768663;50769373	ES	0.5	50	50	ENSMUST00000189963.2	ENSMUSG00000100388.2	Gm29116	chrY	lncRNA	predicted gene 29116
chrY	50767262	50767752	+	50767262	50767748	A3SS	0.5	50	50	ENSMUST00000189963.2	ENSMUSG00000100388.2	Gm29116	chrY	lncRNA	predicted gene 29116
chrY	51060956	51062397	+	51060956;51061869	51061686;51062397	ES	0.5	50	50	ENSMUST00000186727.7	ENSMUSG00000100915.7	Gm29321	chrY	lncRNA	predicted gene 29321
chrY	51060285	51060775	+	51060285	51060771	A3SS	0.5	50	50	ENSMUST00000186727.7	ENSMUSG00000100915.7	Gm29321	chrY	lncRNA	predicted gene 29321
chrY	51278484	51279924	+	51278484;51279397	51279214;51279924	ES	0.5	50	50	ENSMUST00000190347.7	ENSMUSG00000099916.7	Gm28318	chrY	lncRNA	predicted gene 28318
chrY	51277813	51278303	+	51277813	51278299	A3SS	0.5	50	50	ENSMUST00000190347.7	ENSMUSG00000099916.7	Gm28318	chrY	lncRNA	predicted gene 28318
chrY	51493322	51494762	+	51493322;51494235	51494052;51494762	ES	0.5	50	50	ENSMUST00000187576.7	ENSMUSG00000100787.7	Gm28316	chrY	lncRNA	predicted gene 28316
chrY	51492651	51493141	+	51492651	51493137	A3SS	0.5	50	50	ENSMUST00000187576.7	ENSMUSG00000100787.7	Gm28316	chrY	lncRNA	predicted gene 28316
chrY	51787895	51789336	+	51787895;51788808	51788625;51789336	ES	0.5	50	50	ENSMUST00000188701.7	ENSMUSG00000100232.7	Gm28947	chrY	lncRNA	predicted gene 28947
chrY	51787224	51787714	+	51787224	51787710	A3SS	0.5	50	50	ENSMUST00000188701.7	ENSMUSG00000100232.7	Gm28947	chrY	lncRNA	predicted gene 28947
chrY	52011659	52013099	+	52011659;52012572	52012389;52013099	ES	0.5	50	50	ENSMUST00000188826.7	ENSMUSG00000100248.7	Gm28950	chrY	lncRNA	predicted gene 28950
chrY	52010988	52011478	+	52010988	52011474	A3SS	0.5	50	50	ENSMUST00000188826.7	ENSMUSG00000100248.7	Gm28950	chrY	lncRNA	predicted gene 28950
chrY	52494895	52496335	+	52494895;52495808	52495625;52496335	ES	0.5	50	50	ENSMUST00000188434.7	ENSMUSG00000099494.7	Gm28197	chrY	lncRNA	predicted gene 28197
chrY	52494224	52494714	+	52494224	52494710	A3SS	0.5	50	50	ENSMUST00000188434.7	ENSMUSG00000099494.7	Gm28197	chrY	lncRNA	predicted gene 28197
chrY	52715793	52717234	+	52715793;52716706	52716523;52717234	ES	0.5	50	50	ENSMUST00000188159.7	ENSMUSG00000102022.7	Gm28735	chrY	lncRNA	predicted gene 28735
chrY	52715122	52715612	+	52715122	52715608	A3SS	0.5	50	50	ENSMUST00000188159.7	ENSMUSG00000102022.7	Gm28735	chrY	lncRNA	predicted gene 28735
chrY	52784265	52791262	+	52784265	52799110	A3SS	0.5	50	50	ENSMUST00000178673.2	ENSMUSG00000095606.8	Gm21258	chrY	protein_coding	predicted gene, 21258
chrY	52791941	52799110	+	52784265	52799110	A5SS	0.5	50	50	ENSMUST00000178673.2	ENSMUSG00000095606.8	Gm21258	chrY	protein_coding	predicted gene, 21258
chrY	52938394	52939834	+	52938394;52939307	52939124;52939834	ES	0.5	50	50	ENSMUST00000187597.7	ENSMUSG00000100584.7	Gm28733	chrY	lncRNA	predicted gene 28733
chrY	52937723	52938213	+	52937723	52938209	A3SS	0.5	50	50	ENSMUST00000187597.7	ENSMUSG00000100584.7	Gm28733	chrY	lncRNA	predicted gene 28733
chrY	53231900	53233340	+	53231900;53232812	53232630;53233340	ES	0.5	50	50	ENSMUST00000188311.7	ENSMUSG00000099654.7	Gm28236	chrY	lncRNA	predicted gene 28236
chrY	53231229	53231719	+	53231229	53231715	A3SS	0.5	50	50	ENSMUST00000188311.7	ENSMUSG00000099654.7	Gm28236	chrY	lncRNA	predicted gene 28236
chrY	53525301	53526742	+	53525301;53526214	53526031;53526742	ES	0.5	50	50	ENSMUST00000186074.7	ENSMUSG00000100401.7	Gm29248	chrY	lncRNA	predicted gene 29248
chrY	53524630	53525120	+	53524630	53525116	A3SS	0.5	50	50	ENSMUST00000186074.7	ENSMUSG00000100401.7	Gm29248	chrY	lncRNA	predicted gene 29248
chrY	53998801	54000241	+	53998801;53999714	53999531;54000241	ES	0.5	50	50	ENSMUST00000187775.7	ENSMUSG00000101190.7	Gm28274	chrY	lncRNA	predicted gene 28274
chrY	53998130	53998620	+	53998130	53998616	A3SS	0.5	50	50	ENSMUST00000187775.7	ENSMUSG00000101190.7	Gm28274	chrY	lncRNA	predicted gene 28274
chrY	54288403	54289844	+	54288403;54289316	54289133;54289844	ES	0.5	50	50	ENSMUST00000186921.7	ENSMUSG00000100227.7	Gm28291	chrY	lncRNA	predicted gene 28291
chrY	54287732	54288222	+	54287732	54288218	A3SS	0.5	50	50	ENSMUST00000186921.7	ENSMUSG00000100227.7	Gm28291	chrY	lncRNA	predicted gene 28291
chrY	54329462	54330902	+	54329462;54330375	54330192;54330902	ES	0.5	50	50	ENSMUST00000190417.7	ENSMUSG00000099456.7	Gm28293	chrY	lncRNA	predicted gene 28293
chrY	54328791	54329281	+	54328791	54329277	A3SS	0.5	50	50	ENSMUST00000190417.7	ENSMUSG00000099456.7	Gm28293	chrY	lncRNA	predicted gene 28293
chrY	54602262	54603703	+	54602262;54603175	54602992;54603703	ES	0.5	50	50	ENSMUST00000189215.7	ENSMUSG00000101542.7	Gm29303	chrY	lncRNA	predicted gene 29303
chrY	54601591	54602081	+	54601591	54602077	A3SS	0.5	50	50	ENSMUST00000189215.7	ENSMUSG00000101542.7	Gm29303	chrY	lncRNA	predicted gene 29303
chrY	55149464	55150905	+	55149464;55150377	55150194;55150905	ES	0.5	50	50	ENSMUST00000189344.7	ENSMUSG00000101422.7	Gm29301	chrY	lncRNA	predicted gene 29301
chrY	55148793	55149283	+	55148793	55149279	A3SS	0.5	50	50	ENSMUST00000189344.7	ENSMUSG00000101422.7	Gm29301	chrY	lncRNA	predicted gene 29301
chrY	55371823	55373263	+	55371823;55372736	55372553;55373263	ES	0.5	50	50	ENSMUST00000188620.7	ENSMUSG00000101967.7	Gm29555	chrY	lncRNA	predicted gene 29555
chrY	55371152	55371642	+	55371152	55371638	A3SS	0.5	50	50	ENSMUST00000188620.7	ENSMUSG00000101967.7	Gm29555	chrY	lncRNA	predicted gene 29555
chrY	55831008	55832448	+	55831008;55831921	55831738;55832448	ES	0.5	50	50	ENSMUST00000189780.7	ENSMUSG00000100054.7	Gm28202	chrY	lncRNA	predicted gene 28202
chrY	55830337	55830827	+	55830337	55830823	A3SS	0.5	50	50	ENSMUST00000189780.7	ENSMUSG00000100054.7	Gm28202	chrY	lncRNA	predicted gene 28202
chrY	56123161	56124602	+	56123161;56124074	56123891;56124602	ES	0.5	50	50	ENSMUST00000187419.7	ENSMUSG00000100167.7	Gm28207	chrY	lncRNA	predicted gene 28207
chrY	56122490	56122980	+	56122490	56122976	A3SS	0.5	50	50	ENSMUST00000187419.7	ENSMUSG00000100167.7	Gm28207	chrY	lncRNA	predicted gene 28207
chrY	56164167	56165607	+	56164167;56165080	56164897;56165607	ES	0.5	50	50	ENSMUST00000185941.7	ENSMUSG00000100144.7	Gm28208	chrY	lncRNA	predicted gene 28208
chrY	56163496	56163986	+	56163496	56163982	A3SS	0.5	50	50	ENSMUST00000185941.7	ENSMUSG00000100144.7	Gm28208	chrY	lncRNA	predicted gene 28208
chrY	57134884	57136325	+	57134884;57135797	57135614;57136325	ES	0.5	50	50	ENSMUST00000186771.2	ENSMUSG00000101782.2	Gm28964	chrY	lncRNA	predicted gene 28964
chrY	57134213	57134703	+	57134213	57134699	A3SS	0.5	50	50	ENSMUST00000186771.2	ENSMUSG00000101782.2	Gm28964	chrY	lncRNA	predicted gene 28964
chrY	57195777	57202605	+	57195777;57197276	57197145;57202605	ES	0.5	50	50	ENSMUST00000189109.7	ENSMUSG00000101155.7	Sly	chrY	protein_coding	Sycp3 like Y-linked
chrY	57203353;57211027	57210993;57218200	+	57203353	57218200	cassetteExon	0.5	100	100	ENSMUST00000189109.7	ENSMUSG00000101155.7	Sly	chrY	protein_coding	Sycp3 like Y-linked
chrY	57203353	57210350	+	57203353	57218200	A3SS	0.33	50	50	ENSMUST00000189109.7	ENSMUSG00000101155.7	Sly	chrY	protein_coding	Sycp3 like Y-linked
chrY	57213136	57218200	+	57203353	57218200	A5SS	0.33	50	50	ENSMUST00000189109.7	ENSMUSG00000101155.7	Sly	chrY	protein_coding	Sycp3 like Y-linked
chrY	57211027	57218200	+	57211027;57213136	57213006;57218200	ES	0.33	50	50	ENSMUST00000191355.7	ENSMUSG00000101155.7	Sly	chrY	protein_coding	Sycp3 like Y-linked
chrY	57195777;57202671	57202605;57203319	+	57195777	57203319	cassetteExon	0.5	100	100	ENSMUST00000191355.7	ENSMUSG00000101155.7	Sly	chrY	protein_coding	Sycp3 like Y-linked
chrY	57203353;57210416	57210350;57210993	+	57203353	57210993	cassetteExon	0.5	100	100	ENSMUST00000191355.7	ENSMUSG00000101155.7	Sly	chrY	protein_coding	Sycp3 like Y-linked
chrY	57195777	57197145	+	57195777	57203319	A3SS	0.33	50	50	ENSMUST00000191355.7	ENSMUSG00000101155.7	Sly	chrY	protein_coding	Sycp3 like Y-linked
chrY	57211027	57218200	+	57211027	57213006	3pMXE	0.5	50	50	ENSMUST00000190676.2	ENSMUSG00000101155.7	Sly	chrY	protein_coding	Sycp3 like Y-linked
chrY	57357324	57358764	+	57357324;57358237	57358054;57358764	ES	0.5	50	50	ENSMUST00000186015.2	ENSMUSG00000101245.2	Gm28965	chrY	lncRNA	predicted gene 28965
chrY	57356653	57357143	+	57356653	57357139	A3SS	0.5	50	50	ENSMUST00000186015.2	ENSMUSG00000101245.2	Gm28965	chrY	lncRNA	predicted gene 28965
chrY	57653412	57654853	+	57653412;57654326	57654143;57654853	ES	0.5	50	50	ENSMUST00000188951.2	ENSMUSG00000099388.2	Gm28966	chrY	lncRNA	predicted gene 28966
chrY	57652741	57653231	+	57652741	57653227	A3SS	0.5	50	50	ENSMUST00000188951.2	ENSMUSG00000099388.2	Gm28966	chrY	lncRNA	predicted gene 28966
chrY	57830531	57831971	-	57830531;57831243	57831060;57831971	ES	0.5	50	50	ENSMUST00000187993.7	ENSMUSG00000101350.7	Gm28962	chrY	lncRNA	predicted gene 28962
chrY	57859494	57860933	-	57859494;57860202	57860022;57860933	ES	0.5	50	50	ENSMUST00000189567.2	ENSMUSG00000100614.2	Gm28963	chrY	lncRNA	predicted gene 28963
chrY	57861111	57861600	-	57861115	57861600	A3SS	0.5	50	50	ENSMUST00000189567.2	ENSMUSG00000100614.2	Gm28963	chrY	lncRNA	predicted gene 28963
chrY	58089018	58090458	-	58089018;58089730	58089546;58090458	ES	0.5	50	50	ENSMUST00000189669.7	ENSMUSG00000100083.7	Gm29467	chrY	lncRNA	predicted gene 29467
chrY	58436491	58437930	+	58436491;58437404	58437220;58437930	ES	0.5	50	50	ENSMUST00000187043.7	ENSMUSG00000101100.7	Gm28326	chrY	lncRNA	predicted gene 28326
chrY	58501175;58502087	58501903;58502616	+	58501175	58502616	cassetteExon	0.5	100	100	ENSMUST00000185288.7	ENSMUSG00000101744.7	Gm28325	chrY	lncRNA	predicted gene 28325
chrY	58697603	58699043	-	58697603;58698315	58698132;58699043	ES	0.5	50	50	ENSMUST00000190221.2	ENSMUSG00000101317.2	Gm28284	chrY	lncRNA	predicted gene 28284
chrY	58699224	58699712	-	58699228	58699712	A3SS	0.5	50	50	ENSMUST00000190221.2	ENSMUSG00000101317.2	Gm28284	chrY	lncRNA	predicted gene 28284
chrY	58726557	58727995	-	58726557;58727265	58727085;58727995	ES	0.5	50	50	ENSMUST00000187201.7	ENSMUSG00000101244.7	Gm29368	chrY	lncRNA	predicted gene 29368
chrY	58964877	58966319	-	58964877;58965590	58965406;58966319	ES	0.5	50	50	ENSMUST00000187174.7	ENSMUSG00000101424.7	Gm28073	chrY	lncRNA	predicted gene 28073
chrY	59031178	59032620	-	59031178;59031891	59031707;59032620	ES	0.5	50	50	ENSMUST00000190424.7	ENSMUSG00000100715.7	Gm28074	chrY	lncRNA	predicted gene 28074
chrY	59093704;59094416	59094232;59095145	-	59093704	59095145	cassetteExon	0.5	100	100	ENSMUST00000190486.7	ENSMUSG00000099551.7	Gm28072	chrY	lncRNA	predicted gene 28072
chrY	59498633;59499544	59499364;59500072	+	59498633	59500072	cassetteExon	0.5	100	100	ENSMUST00000191119.7	ENSMUSG00000101531.7	Gm29672	chrY	lncRNA	predicted gene 29672
chrY	59527524	59528964	+	59527524;59528435	59528252;59528964	ES	0.5	50	50	ENSMUST00000189485.2	ENSMUSG00000100425.2	Gm29131	chrY	lncRNA	predicted gene 29131
chrY	59526855	59527343	+	59526855	59527339	A3SS	0.5	50	50	ENSMUST00000189485.2	ENSMUSG00000100425.2	Gm29131	chrY	lncRNA	predicted gene 29131
chrY	59718518	59719959	-	59718518;59719231	59719047;59719959	ES	0.5	50	50	ENSMUST00000191015.7	ENSMUSG00000101300.7	Gm29130	chrY	lncRNA	predicted gene 29130
chrY	59780233	59781675	-	59780233;59780946	59780762;59781675	ES	0.5	50	50	ENSMUST00000191588.7	ENSMUSG00000101891.7	Gm29132	chrY	lncRNA	predicted gene 29132
chrY	60124377;60125289	60125105;60125817	+	60124377	60125817	cassetteExon	0.5	100	100	ENSMUST00000186829.7	ENSMUSG00000099866.7	Gm28889	chrY	lncRNA	predicted gene 28889
chrY	60344948	60346386	+	60344948;60345858	60345678;60346386	ES	0.5	50	50	ENSMUST00000191561.2	ENSMUSG00000101910.2	Gm28691	chrY	lncRNA	predicted gene 28691
chrY	60344281	60344770	+	60344281	60344766	A3SS	0.5	50	50	ENSMUST00000191561.2	ENSMUSG00000101910.2	Gm28691	chrY	lncRNA	predicted gene 28691
chrY	60373888	60375328	+	60373888;60374799	60374616;60375328	ES	0.5	50	50	ENSMUST00000189645.7	ENSMUSG00000100579.7	Gm28692	chrY	lncRNA	predicted gene 28692
chrY	60566614	60568052	-	60566614;60567324	60567140;60568052	ES	0.5	50	50	ENSMUST00000190325.7	ENSMUSG00000100057.7	Gm28690	chrY	lncRNA	predicted gene 28690
chrY	60631340	60632779	-	60631340;60632050	60631866;60632779	ES	0.5	50	50	ENSMUST00000187203.7	ENSMUSG00000100609.7	Gm28687	chrY	lncRNA	predicted gene 28687
chrY	61205910	61207347	+	61205910;61206819	61206639;61207347	ES	0.5	50	50	ENSMUST00000190931.2	ENSMUSG00000100012.2	Gm29207	chrY	lncRNA	predicted gene 29207
chrY	61205243	61205732	+	61205243	61205728	A3SS	0.5	50	50	ENSMUST00000190931.2	ENSMUSG00000100012.2	Gm29207	chrY	lncRNA	predicted gene 29207
chrY	61234832	61236272	+	61234832;61235743	61235560;61236272	ES	0.5	50	50	ENSMUST00000187384.2	ENSMUSG00000099836.2	Gm29204	chrY	lncRNA	predicted gene 29204
chrY	61234163	61234651	+	61234163	61234647	A3SS	0.5	50	50	ENSMUST00000187384.2	ENSMUSG00000099836.2	Gm29204	chrY	lncRNA	predicted gene 29204
chrY	61496922	61498760	-	61496922	61498319	5pMXE	0.5	50	50	ENSMUST00000189029.7	ENSMUSG00000099393.7	Gm28179	chrY	transcribed_processed_pseudogene	predicted gene 28179
chrY	61587141	61588582	+	61587141;61588054	61587871;61588582	ES	0.5	50	50	ENSMUST00000187355.7	ENSMUSG00000101353.7	Gm29203	chrY	lncRNA	predicted gene 29203
chrY	61818294	61819734	+	61818294;61819207	61819024;61819734	ES	0.5	50	50	ENSMUST00000189689.2	ENSMUSG00000099355.2	Gm29342	chrY	lncRNA	predicted gene 29342
chrY	61817623	61818113	+	61817623	61818109	A3SS	0.5	50	50	ENSMUST00000189689.2	ENSMUSG00000099355.2	Gm29342	chrY	lncRNA	predicted gene 29342
chrY	62138589	62140029	+	62138589;62139501	62139318;62140029	ES	0.5	50	50	ENSMUST00000189502.7	ENSMUSG00000101285.7	Gm28600	chrY	lncRNA	predicted gene 28600
chrY	62207057	62214093	+	62207057	62221955	A3SS	0.5	50	50	ENSMUST00000178115.2	ENSMUSG00000094821.8	Gm21518	chrY	protein_coding	predicted gene, 21518
chrY	62214778	62221955	+	62207057	62221955	A5SS	0.5	50	50	ENSMUST00000178115.2	ENSMUSG00000094821.8	Gm21518	chrY	protein_coding	predicted gene, 21518
chrY	62574145;62576220	62575984;62577528	-	62574145;62575673	62574841;62577528	MXE	0.5	100	100	ENSMUST00000188415.7	ENSMUSG00000101326.7	Gm28835	chrY	transcribed_unprocessed_pseudogene	predicted gene 28835
chrY	62575673	62577528	-	62576220	62577528	A3SS&ES	0.5	50	50	ENSMUST00000189206.2	ENSMUSG00000101326.7	Gm28835	chrY	transcribed_unprocessed_pseudogene	predicted gene 28835
chrY	62574145	62574841	-	62574145	62575984	A5SS	0.5	50	50	ENSMUST00000189206.2	ENSMUSG00000101326.7	Gm28835	chrY	transcribed_unprocessed_pseudogene	predicted gene 28835
chrY	62658134	62659575	+	62658134;62659048	62658865;62659575	ES	0.5	50	50	ENSMUST00000187258.2	ENSMUSG00000101614.2	Gm29547	chrY	lncRNA	predicted gene 29547
chrY	62657463	62657953	+	62657463	62657949	A3SS	0.5	50	50	ENSMUST00000187258.2	ENSMUSG00000101614.2	Gm29547	chrY	lncRNA	predicted gene 29547
chrY	62888541	62889981	+	62888541;62889454	62889271;62889981	ES	0.5	50	50	ENSMUST00000189569.2	ENSMUSG00000101668.2	Gm29549	chrY	lncRNA	predicted gene 29549
chrY	62887870	62888360	+	62887870	62888356	A3SS	0.5	50	50	ENSMUST00000189569.2	ENSMUSG00000101668.2	Gm29549	chrY	lncRNA	predicted gene 29549
chrY	63174371	63175812	+	63174371;63175284	63175101;63175812	ES	0.5	50	50	ENSMUST00000185843.2	ENSMUSG00000099699.2	Gm29421	chrY	lncRNA	predicted gene 29421
chrY	63173700	63174190	+	63173700	63174186	A3SS	0.5	50	50	ENSMUST00000185843.2	ENSMUSG00000099699.2	Gm29421	chrY	lncRNA	predicted gene 29421
chrY	63694181	63695622	+	63694181;63695094	63694911;63695622	ES	0.5	50	50	ENSMUST00000185900.2	ENSMUSG00000099520.2	Gm29061	chrY	lncRNA	predicted gene 29061
chrY	63693510	63694000	+	63693510	63693996	A3SS	0.5	50	50	ENSMUST00000185900.2	ENSMUSG00000099520.2	Gm29061	chrY	lncRNA	predicted gene 29061
chrY	63911726	63913166	+	63911726;63912639	63912456;63913166	ES	0.5	50	50	ENSMUST00000188079.2	ENSMUSG00000101125.2	Gm29625	chrY	lncRNA	predicted gene 29625
chrY	63911055	63911545	+	63911055	63911541	A3SS	0.5	50	50	ENSMUST00000188079.2	ENSMUSG00000101125.2	Gm29625	chrY	lncRNA	predicted gene 29625
chrY	64126531	64127971	+	64126531;64127444	64127261;64127971	ES	0.5	50	50	ENSMUST00000187206.2	ENSMUSG00000100452.2	Gm29628	chrY	lncRNA	predicted gene 29628
chrY	64125860	64126350	+	64125860	64126346	A3SS	0.5	50	50	ENSMUST00000187206.2	ENSMUSG00000100452.2	Gm29628	chrY	lncRNA	predicted gene 29628
chrY	64338691;64340766	64340530;64342072	-	64338691;64340219	64339387;64342072	MXE	0.5	100	100	ENSMUST00000190185.7	ENSMUSG00000100322.7	Gm29624	chrY	transcribed_unprocessed_pseudogene	predicted gene 29624
chrY	64337992	64338508	-	64332847	64338508	A3SS	0.5	50	50	ENSMUST00000190185.7	ENSMUSG00000100322.7	Gm29624	chrY	transcribed_unprocessed_pseudogene	predicted gene 29624
chrY	64340219	64342072	-	64340766	64342072	A3SS&ES	0.5	50	50	ENSMUST00000191148.2	ENSMUSG00000100322.7	Gm29624	chrY	transcribed_unprocessed_pseudogene	predicted gene 29624
chrY	64338691	64339387	-	64338691	64340530	A5SS	0.5	50	50	ENSMUST00000191148.2	ENSMUSG00000100322.7	Gm29624	chrY	transcribed_unprocessed_pseudogene	predicted gene 29624
chrY	64420985	64422426	+	64420985;64421898	64421715;64422426	ES	0.5	50	50	ENSMUST00000188697.2	ENSMUSG00000099940.2	Gm29265	chrY	lncRNA	predicted gene 29265
chrY	64420314	64420804	+	64420314	64420800	A3SS	0.5	50	50	ENSMUST00000188697.2	ENSMUSG00000099940.2	Gm29265	chrY	lncRNA	predicted gene 29265
chrY	64644767	64646207	+	64644767;64645680	64645497;64646207	ES	0.5	50	50	ENSMUST00000188457.2	ENSMUSG00000101539.2	Gm28252	chrY	lncRNA	predicted gene 28252
chrY	64644096	64644586	+	64644096	64644582	A3SS	0.5	50	50	ENSMUST00000188457.2	ENSMUSG00000101539.2	Gm28252	chrY	lncRNA	predicted gene 28252
chrY	65244593	65246472	-	65237210	65246472	A3SS	0.33	50	50	ENSMUST00000190416.7	ENSMUSG00000101982.7	Gm28990	chrY	transcribed_processed_pseudogene	predicted gene 28990
chrY	65245140	65246472	-	65237210	65246472	A3SS	0.33	50	50	ENSMUST00000190416.7	ENSMUSG00000101982.7	Gm28990	chrY	transcribed_processed_pseudogene	predicted gene 28990
chrY	65237210	65242882	-	65237210	65246472	A5SS	0.5	50	50	ENSMUST00000190416.7	ENSMUSG00000101982.7	Gm28990	chrY	transcribed_processed_pseudogene	predicted gene 28990
chrY	65243065	65244463	-	65243065;65243978	65243761;65244463	ES	0.33	50	50	ENSMUST00000189255.7	ENSMUSG00000101982.7	Gm28990	chrY	transcribed_processed_pseudogene	predicted gene 28990
chrY	65243065;65245140	65244904;65246472	-	65243065;65244593	65243761;65246472	MXE	0.5	100	100	ENSMUST00000189255.7	ENSMUSG00000101982.7	Gm28990	chrY	transcribed_processed_pseudogene	predicted gene 28990
chrY	65242365	65242882	-	65237210	65242882	A3SS	0.5	50	50	ENSMUST00000189255.7	ENSMUSG00000101982.7	Gm28990	chrY	transcribed_processed_pseudogene	predicted gene 28990
chrY	65242365	65244463	-	65243978	65244463	A3SS&ES	0.33	50	50	ENSMUST00000189255.7	ENSMUSG00000101982.7	Gm28990	chrY	transcribed_processed_pseudogene	predicted gene 28990
chrY	65242365;65243065	65242882;65244463	-	65242365	65244463	cassetteExon	0.5	100	100	ENSMUST00000187865.7	ENSMUSG00000101982.7	Gm28990	chrY	transcribed_processed_pseudogene	predicted gene 28990
chrY	65243065	65244904	-	65243065	65244463	5pMXE	0.33	50	50	ENSMUST00000189490.7	ENSMUSG00000101982.7	Gm28990	chrY	transcribed_processed_pseudogene	predicted gene 28990
chrY	65242365;65244593	65244463;65246472	-	65242365;65245140	65242882;65246472	MXE	0.5	100	100	ENSMUST00000188248.2	ENSMUSG00000101982.7	Gm28990	chrY	transcribed_processed_pseudogene	predicted gene 28990
chrY	65243065;65244593	65244463;65246472	-	65243065;65245140	65244904;65246472	MXE	0.5	100	100	ENSMUST00000188248.2	ENSMUSG00000101982.7	Gm28990	chrY	transcribed_processed_pseudogene	predicted gene 28990
chrY	65243065	65243761	-	65243065	65244904	A5SS	0.33	50	50	ENSMUST00000188248.2	ENSMUSG00000101982.7	Gm28990	chrY	transcribed_processed_pseudogene	predicted gene 28990
chrY	65325407	65326848	+	65325407;65326320	65326137;65326848	ES	0.5	50	50	ENSMUST00000188224.2	ENSMUSG00000101507.2	Gm29457	chrY	lncRNA	predicted gene 29457
chrY	65324736	65325226	+	65324736	65325222	A3SS	0.5	50	50	ENSMUST00000188224.2	ENSMUSG00000101507.2	Gm29457	chrY	lncRNA	predicted gene 29457
chrY	65386273	65387638	+	65386273	65387635	A3SS	0.5	50	50	ENSMUST00000190282.7	ENSMUSG00000093993.8	Gm20736	chrY	protein_coding	predicted gene, 20736
chrY	65393878	65400874	+	65393878	65408722	A3SS	0.5	50	50	ENSMUST00000190282.7	ENSMUSG00000093993.8	Gm20736	chrY	protein_coding	predicted gene, 20736
chrY	65401553	65408722	+	65393878	65408722	A5SS	0.5	50	50	ENSMUST00000190282.7	ENSMUSG00000093993.8	Gm20736	chrY	protein_coding	predicted gene, 20736
chrY	65548007	65549447	+	65548007;65548920	65548737;65549447	ES	0.5	50	50	ENSMUST00000190181.2	ENSMUSG00000100126.2	Gm29584	chrY	lncRNA	predicted gene 29584
chrY	65547336	65547826	+	65547336	65547822	A3SS	0.5	50	50	ENSMUST00000190181.2	ENSMUSG00000100126.2	Gm29584	chrY	lncRNA	predicted gene 29584
chrY	65754171;65760010	65759827;65763392	-	65754171	65763392	cassetteExon	0.5	100	100	ENSMUST00000186478.7	ENSMUSG00000101177.7	Gm29586	chrY	transcribed_unprocessed_pseudogene	predicted gene 29586
chrY	65761538	65763392	-	65754171	65763392	A3SS	0.25	50	50	ENSMUST00000186478.7	ENSMUSG00000101177.7	Gm29586	chrY	transcribed_unprocessed_pseudogene	predicted gene 29586
chrY	65762085	65763392	-	65754171	65763392	A3SS	0.25	50	50	ENSMUST00000186478.7	ENSMUSG00000101177.7	Gm29586	chrY	transcribed_unprocessed_pseudogene	predicted gene 29586
chrY	65760010	65761408	-	65760010;65760923	65760706;65761408	ES	0.33	50	50	ENSMUST00000185225.7	ENSMUSG00000101177.7	Gm29586	chrY	transcribed_unprocessed_pseudogene	predicted gene 29586
chrY	65760010;65762085	65761849;65763392	-	65760010;65761538	65760706;65763392	MXE	0.5	100	100	ENSMUST00000185225.7	ENSMUSG00000101177.7	Gm29586	chrY	transcribed_unprocessed_pseudogene	predicted gene 29586
chrY	65759311	65759827	-	65754171	65759827	A3SS	0.5	50	50	ENSMUST00000185225.7	ENSMUSG00000101177.7	Gm29586	chrY	transcribed_unprocessed_pseudogene	predicted gene 29586
chrY	65759311	65761408	-	65760923	65761408	A3SS&ES	0.33	50	50	ENSMUST00000185225.7	ENSMUSG00000101177.7	Gm29586	chrY	transcribed_unprocessed_pseudogene	predicted gene 29586
chrY	65759311;65760010	65759827;65761408	-	65759311	65761408	cassetteExon	0.5	100	100	ENSMUST00000187684.7	ENSMUSG00000101177.7	Gm29586	chrY	transcribed_unprocessed_pseudogene	predicted gene 29586
chrY	65759311;65760010	65759827;65763392	-	65759311;65761538	65761408;65763392	MXE	0.5	100	100	ENSMUST00000187684.7	ENSMUSG00000101177.7	Gm29586	chrY	transcribed_unprocessed_pseudogene	predicted gene 29586
chrY	65762085	65763392	-	65761538	65763392	A3SS	0.33	50	50	ENSMUST00000187684.7	ENSMUSG00000101177.7	Gm29586	chrY	transcribed_unprocessed_pseudogene	predicted gene 29586
chrY	65760010;65761538	65761408;65763392	-	65760010	65763392	cassetteExon	0.5	100	100	ENSMUST00000189070.7	ENSMUSG00000101177.7	Gm29586	chrY	transcribed_unprocessed_pseudogene	predicted gene 29586
chrY	65760010;65762085	65761849;65763392	-	65760010	65763392	cassetteExon	0.5	100	100	ENSMUST00000189070.7	ENSMUSG00000101177.7	Gm29586	chrY	transcribed_unprocessed_pseudogene	predicted gene 29586
chrY	65760010	65760706	-	65760010	65763392	A5SS	0.25	50	50	ENSMUST00000189070.7	ENSMUSG00000101177.7	Gm29586	chrY	transcribed_unprocessed_pseudogene	predicted gene 29586
chrY	65760010	65761849	-	65760010	65761408	5pMXE	0.25	50	50	ENSMUST00000187326.7	ENSMUSG00000101177.7	Gm29586	chrY	transcribed_unprocessed_pseudogene	predicted gene 29586
chrY	65760010	65763392	-	65760010	65761408	5pMXE	0.25	50	50	ENSMUST00000187326.7	ENSMUSG00000101177.7	Gm29586	chrY	transcribed_unprocessed_pseudogene	predicted gene 29586
chrY	65759311;65761538	65761408;65763392	-	65759311;65762085	65759827;65763392	MXE	0.5	100	100	ENSMUST00000191130.2	ENSMUSG00000101177.7	Gm29586	chrY	transcribed_unprocessed_pseudogene	predicted gene 29586
chrY	65760010;65761538	65761408;65763392	-	65760010;65762085	65761849;65763392	MXE	0.5	100	100	ENSMUST00000191130.2	ENSMUSG00000101177.7	Gm29586	chrY	transcribed_unprocessed_pseudogene	predicted gene 29586
chrY	65760010	65760706	-	65760010	65761849	A5SS	0.25	50	50	ENSMUST00000191130.2	ENSMUSG00000101177.7	Gm29586	chrY	transcribed_unprocessed_pseudogene	predicted gene 29586
chrY	65841566	65843006	+	65841566;65842478	65842296;65843006	ES	0.5	50	50	ENSMUST00000186847.2	ENSMUSG00000101512.2	Gm28135	chrY	lncRNA	predicted gene 28135
chrY	65840895	65841385	+	65840895	65841381	A3SS	0.5	50	50	ENSMUST00000186847.2	ENSMUSG00000101512.2	Gm28135	chrY	lncRNA	predicted gene 28135
chrY	66054331	66055728	-	66054331;66055243	66055026;66055728	ES	0.25	50	50	ENSMUST00000189800.7	ENSMUSG00000100988.7	Gm28136	chrY	transcribed_unprocessed_pseudogene	predicted gene 28136
chrY	66055243	66057734	-	66055243;66055858	66055728;66057734	ES	0.25	50	50	ENSMUST00000189800.7	ENSMUSG00000100988.7	Gm28136	chrY	transcribed_unprocessed_pseudogene	predicted gene 28136
chrY	66054331;66056405	66056169;66057734	-	66054331;66055858	66055026;66057734	MXE	0.5	100	100	ENSMUST00000189800.7	ENSMUSG00000100988.7	Gm28136	chrY	transcribed_unprocessed_pseudogene	predicted gene 28136
chrY	66053632	66054148	-	66048460	66054148	A3SS	0.5	50	50	ENSMUST00000189800.7	ENSMUSG00000100988.7	Gm28136	chrY	transcribed_unprocessed_pseudogene	predicted gene 28136
chrY	66053632	66055728	-	66055243	66055728	A3SS&ES	0.25	50	50	ENSMUST00000189800.7	ENSMUSG00000100988.7	Gm28136	chrY	transcribed_unprocessed_pseudogene	predicted gene 28136
chrY	66055068	66055728	-	66055243	66055728	A3SS	0.25	50	50	ENSMUST00000189800.7	ENSMUSG00000100988.7	Gm28136	chrY	transcribed_unprocessed_pseudogene	predicted gene 28136
chrY	66053632	66055728	-	66053632	66054148	5pMXE	0.5	50	50	ENSMUST00000188083.2	ENSMUSG00000100988.7	Gm28136	chrY	transcribed_unprocessed_pseudogene	predicted gene 28136
chrY	66054331;66055243	66055026;66057734	-	66054331	66057734	cassetteExon	0.5	100	100	ENSMUST00000188567.7	ENSMUSG00000100988.7	Gm28136	chrY	transcribed_unprocessed_pseudogene	predicted gene 28136
chrY	66053632;66055858	66055728;66057734	-	66053632;66054331	66054148;66057734	MXE	0.5	100	100	ENSMUST00000188567.7	ENSMUSG00000100988.7	Gm28136	chrY	transcribed_unprocessed_pseudogene	predicted gene 28136
chrY	66054331;66055858	66055728;66057734	-	66054331	66057734	cassetteExon	0.5	100	100	ENSMUST00000188567.7	ENSMUSG00000100988.7	Gm28136	chrY	transcribed_unprocessed_pseudogene	predicted gene 28136
chrY	66054331;66056405	66056169;66057734	-	66054331	66057734	cassetteExon	0.5	100	100	ENSMUST00000188567.7	ENSMUSG00000100988.7	Gm28136	chrY	transcribed_unprocessed_pseudogene	predicted gene 28136
chrY	66053632	66055728	-	66053632;66054331	66054148;66055728	ES	0.25	50	50	ENSMUST00000190098.2	ENSMUSG00000100988.7	Gm28136	chrY	transcribed_unprocessed_pseudogene	predicted gene 28136
chrY	66054331	66056169	-	66054331	66055728	5pMXE	0.25	50	50	ENSMUST00000190098.2	ENSMUSG00000100988.7	Gm28136	chrY	transcribed_unprocessed_pseudogene	predicted gene 28136
chrY	66054331	66057734	-	66054331	66055728	5pMXE	0.25	50	50	ENSMUST00000190098.2	ENSMUSG00000100988.7	Gm28136	chrY	transcribed_unprocessed_pseudogene	predicted gene 28136
chrY	66054331;66055068	66055026;66055728	-	66054331	66055728	cassetteExon	0.5	100	100	ENSMUST00000190098.2	ENSMUSG00000100988.7	Gm28136	chrY	transcribed_unprocessed_pseudogene	predicted gene 28136
chrY	66055068	66055728	-	66053632	66055728	A3SS	0.25	50	50	ENSMUST00000185551.7	ENSMUSG00000100988.7	Gm28136	chrY	transcribed_unprocessed_pseudogene	predicted gene 28136
chrY	66055243	66057734	-	66055858	66057734	A3SS&ES	0.25	50	50	ENSMUST00000185551.7	ENSMUSG00000100988.7	Gm28136	chrY	transcribed_unprocessed_pseudogene	predicted gene 28136
chrY	66056405	66057734	-	66055858	66057734	A3SS	0.25	50	50	ENSMUST00000185551.7	ENSMUSG00000100988.7	Gm28136	chrY	transcribed_unprocessed_pseudogene	predicted gene 28136
chrY	66055243	66057734	-	66055243	66055728	5pMXE	0.5	50	50	ENSMUST00000190093.7	ENSMUSG00000100988.7	Gm28136	chrY	transcribed_unprocessed_pseudogene	predicted gene 28136
chrY	66054331;66055243	66055026;66057734	-	66054331;66056405	66056169;66057734	MXE	0.5	100	100	ENSMUST00000188388.7	ENSMUSG00000100988.7	Gm28136	chrY	transcribed_unprocessed_pseudogene	predicted gene 28136
chrY	66053632;66055858	66055728;66057734	-	66053632;66056405	66054148;66057734	MXE	0.5	100	100	ENSMUST00000188388.7	ENSMUSG00000100988.7	Gm28136	chrY	transcribed_unprocessed_pseudogene	predicted gene 28136
chrY	66054331;66055858	66055728;66057734	-	66054331;66056405	66056169;66057734	MXE	0.5	100	100	ENSMUST00000188388.7	ENSMUSG00000100988.7	Gm28136	chrY	transcribed_unprocessed_pseudogene	predicted gene 28136
chrY	66054331;66055858	66055728;66057734	-	66054331;66055243	66055026;66057734	MXE	0.5	100	100	ENSMUST00000190605.7	ENSMUSG00000100988.7	Gm28136	chrY	transcribed_unprocessed_pseudogene	predicted gene 28136
chrY	66135833	66137274	+	66135833;66136746	66136563;66137274	ES	0.5	50	50	ENSMUST00000191344.2	ENSMUSG00000101256.2	Gm28133	chrY	lncRNA	predicted gene 28133
chrY	66135162	66135652	+	66135162	66135648	A3SS	0.5	50	50	ENSMUST00000191344.2	ENSMUSG00000101256.2	Gm28133	chrY	lncRNA	predicted gene 28133
chrY	66387304	66388702	+	66387304;66388006	66387789;66388702	ES	0.25	50	50	ENSMUST00000185892.7	ENSMUSG00000101032.7	Gm29377	chrY	transcribed_unprocessed_pseudogene	predicted gene 29377
chrY	66385302;66386863	66386627;66388702	+	66385302;66388006	66387174;66388702	MXE	0.5	100	100	ENSMUST00000185892.7	ENSMUSG00000101032.7	Gm29377	chrY	transcribed_unprocessed_pseudogene	predicted gene 29377
chrY	66387304	66387964	+	66387304	66387789	A3SS	0.25	50	50	ENSMUST00000185892.7	ENSMUSG00000101032.7	Gm29377	chrY	transcribed_unprocessed_pseudogene	predicted gene 29377
chrY	66385302	66388702	+	66385302;66386863	66386627;66388702	ES	0.25	50	50	ENSMUST00000189852.7	ENSMUSG00000101032.7	Gm29377	chrY	transcribed_unprocessed_pseudogene	predicted gene 29377
chrY	66385302;66387304	66387174;66388702	+	66385302;66386863	66386627;66388702	MXE	0.5	100	100	ENSMUST00000189852.7	ENSMUSG00000101032.7	Gm29377	chrY	transcribed_unprocessed_pseudogene	predicted gene 29377
chrY	66385302;66387304	66387174;66389401	+	66385302;66388885	66386627;66389401	MXE	0.5	100	100	ENSMUST00000189852.7	ENSMUSG00000101032.7	Gm29377	chrY	transcribed_unprocessed_pseudogene	predicted gene 29377
chrY	66388006	66388702	+	66386863	66388702	A5SS	0.25	50	50	ENSMUST00000189852.7	ENSMUSG00000101032.7	Gm29377	chrY	transcribed_unprocessed_pseudogene	predicted gene 29377
chrY	66385302;66387304	66387174;66389401	+	66385302	66389401	cassetteExon	0.5	100	100	ENSMUST00000190756.7	ENSMUSG00000101032.7	Gm29377	chrY	transcribed_unprocessed_pseudogene	predicted gene 29377
chrY	66385302;66388885	66388702;66389401	+	66385302	66389401	cassetteExon	0.5	100	100	ENSMUST00000190756.7	ENSMUSG00000101032.7	Gm29377	chrY	transcribed_unprocessed_pseudogene	predicted gene 29377
chrY	66385302	66386627	+	66385302	66389401	A3SS	0.25	50	50	ENSMUST00000190756.7	ENSMUSG00000101032.7	Gm29377	chrY	transcribed_unprocessed_pseudogene	predicted gene 29377
chrY	66385302;66388885	66388702;66389401	+	66385302;66387304	66387174;66389401	MXE	0.5	100	100	ENSMUST00000189415.7	ENSMUSG00000101032.7	Gm29377	chrY	transcribed_unprocessed_pseudogene	predicted gene 29377
chrY	66387304;66388885	66388702;66389401	+	66387304	66389401	cassetteExon	0.5	100	100	ENSMUST00000189415.7	ENSMUSG00000101032.7	Gm29377	chrY	transcribed_unprocessed_pseudogene	predicted gene 29377
chrY	66385302	66386627	+	66385302	66387174	A3SS	0.25	50	50	ENSMUST00000189415.7	ENSMUSG00000101032.7	Gm29377	chrY	transcribed_unprocessed_pseudogene	predicted gene 29377
chrY	66387304	66387789	+	66387304	66389401	A3SS	0.25	50	50	ENSMUST00000189415.7	ENSMUSG00000101032.7	Gm29377	chrY	transcribed_unprocessed_pseudogene	predicted gene 29377
chrY	66387304	66387964	+	66387304	66389401	A3SS	0.25	50	50	ENSMUST00000189415.7	ENSMUSG00000101032.7	Gm29377	chrY	transcribed_unprocessed_pseudogene	predicted gene 29377
chrY	66385302;66387304	66387174;66388702	+	66385302	66388702	cassetteExon	0.5	100	100	ENSMUST00000186058.7	ENSMUSG00000101032.7	Gm29377	chrY	transcribed_unprocessed_pseudogene	predicted gene 29377
chrY	66388006	66388702	+	66385302	66388702	A5SS	0.25	50	50	ENSMUST00000186058.7	ENSMUSG00000101032.7	Gm29377	chrY	transcribed_unprocessed_pseudogene	predicted gene 29377
chrY	66387304	66388702	+	66387304;66388006	66387964;66388702	ES	0.5	50	50	ENSMUST00000190996.7	ENSMUSG00000101032.7	Gm29377	chrY	transcribed_unprocessed_pseudogene	predicted gene 29377
chrY	66385302	66388702	+	66387304	66388702	5pMXE	0.25	50	50	ENSMUST00000186963.2	ENSMUSG00000101032.7	Gm29377	chrY	transcribed_unprocessed_pseudogene	predicted gene 29377
chrY	66386863	66388702	+	66387304	66388702	5pMXE	0.25	50	50	ENSMUST00000186963.2	ENSMUSG00000101032.7	Gm29377	chrY	transcribed_unprocessed_pseudogene	predicted gene 29377
chrY	66567625	66569065	+	66567625;66568538	66568355;66569065	ES	0.5	50	50	ENSMUST00000190168.2	ENSMUSG00000101278.2	Gm29381	chrY	lncRNA	predicted gene 29381
chrY	66566954	66567444	+	66566954	66567440	A3SS	0.5	50	50	ENSMUST00000190168.2	ENSMUSG00000101278.2	Gm29381	chrY	lncRNA	predicted gene 29381
chrY	66768500	66769690	+	66768322	66769690	A5SS	0.5	50	50	ENSMUST00000187769.7	ENSMUSG00000100373.7	Gm29003	chrY	lncRNA	predicted gene 29003
chrY	66780580	66783076	-	66780580;66781194	66781065;66783076	ES	0.16	50	50	ENSMUST00000187886.7	ENSMUSG00000101202.7	Gm28749	chrY	transcribed_unprocessed_pseudogene	predicted gene 28749
chrY	66779667;66781741	66781505;66783076	-	66779667;66781194	66780363;66783076	MXE	0.5	100	100	ENSMUST00000187886.7	ENSMUSG00000101202.7	Gm28749	chrY	transcribed_unprocessed_pseudogene	predicted gene 28749
chrY	66778968	66779484	-	66773804	66779484	A3SS	0.5	50	50	ENSMUST00000187886.7	ENSMUSG00000101202.7	Gm28749	chrY	transcribed_unprocessed_pseudogene	predicted gene 28749
chrY	66778968	66783076	-	66781194	66783076	A3SS&ES	0.16	50	50	ENSMUST00000187886.7	ENSMUSG00000101202.7	Gm28749	chrY	transcribed_unprocessed_pseudogene	predicted gene 28749
chrY	66780405	66781065	-	66780580	66781065	A3SS	0.5	50	50	ENSMUST00000187886.7	ENSMUSG00000101202.7	Gm28749	chrY	transcribed_unprocessed_pseudogene	predicted gene 28749
chrY	66773804;66779667	66779484;66783076	-	66773804	66783076	cassetteExon	0.5	100	100	ENSMUST00000187827.2	ENSMUSG00000101202.7	Gm28749	chrY	transcribed_unprocessed_pseudogene	predicted gene 28749
chrY	66778968	66783076	-	66773804	66783076	A3SS	0.16	50	50	ENSMUST00000187827.2	ENSMUSG00000101202.7	Gm28749	chrY	transcribed_unprocessed_pseudogene	predicted gene 28749
chrY	66780580	66783076	-	66773804	66783076	A3SS	0.16	50	50	ENSMUST00000187827.2	ENSMUSG00000101202.7	Gm28749	chrY	transcribed_unprocessed_pseudogene	predicted gene 28749
chrY	66781194	66783076	-	66773804	66783076	A3SS	0.16	50	50	ENSMUST00000187827.2	ENSMUSG00000101202.7	Gm28749	chrY	transcribed_unprocessed_pseudogene	predicted gene 28749
chrY	66781741	66783076	-	66773804	66783076	A3SS	0.16	50	50	ENSMUST00000187827.2	ENSMUSG00000101202.7	Gm28749	chrY	transcribed_unprocessed_pseudogene	predicted gene 28749
chrY	66778968	66783076	-	66778968;66779667	66779484;66783076	ES	0.2	50	50	ENSMUST00000187668.7	ENSMUSG00000101202.7	Gm28749	chrY	transcribed_unprocessed_pseudogene	predicted gene 28749
chrY	66779667;66780580	66780363;66783076	-	66779667	66783076	cassetteExon	0.5	100	100	ENSMUST00000187668.7	ENSMUSG00000101202.7	Gm28749	chrY	transcribed_unprocessed_pseudogene	predicted gene 28749
chrY	66779667;66781741	66781505;66783076	-	66779667	66783076	cassetteExon	0.5	100	100	ENSMUST00000187668.7	ENSMUSG00000101202.7	Gm28749	chrY	transcribed_unprocessed_pseudogene	predicted gene 28749
chrY	66781194	66783076	-	66779667	66783076	A3SS	0.2	50	50	ENSMUST00000187668.7	ENSMUSG00000101202.7	Gm28749	chrY	transcribed_unprocessed_pseudogene	predicted gene 28749
chrY	66779667;66780580	66780363;66783076	-	66779667;66781741	66781505;66783076	MXE	0.5	100	100	ENSMUST00000188477.2	ENSMUSG00000101202.7	Gm28749	chrY	transcribed_unprocessed_pseudogene	predicted gene 28749
chrY	66781194	66783076	-	66781741	66783076	A3SS&ES	0.2	50	50	ENSMUST00000188477.2	ENSMUSG00000101202.7	Gm28749	chrY	transcribed_unprocessed_pseudogene	predicted gene 28749
chrY	66780580	66783076	-	66778968	66783076	A3SS	0.16	50	50	ENSMUST00000188513.2	ENSMUSG00000101202.7	Gm28749	chrY	transcribed_unprocessed_pseudogene	predicted gene 28749
chrY	66781741	66783076	-	66778968	66783076	A3SS	0.16	50	50	ENSMUST00000188513.2	ENSMUSG00000101202.7	Gm28749	chrY	transcribed_unprocessed_pseudogene	predicted gene 28749
chrY	67085636	67087034	-	67085636;67086549	67086332;67087034	ES	0.25	50	50	ENSMUST00000190932.7	ENSMUSG00000099570.7	Gm29000	chrY	transcribed_unprocessed_pseudogene	predicted gene 29000
chrY	67085636;67087710	67087474;67089034	-	67085636;67087163	67086332;67089034	MXE	0.5	100	100	ENSMUST00000190932.7	ENSMUSG00000099570.7	Gm29000	chrY	transcribed_unprocessed_pseudogene	predicted gene 29000
chrY	67084937	67085453	-	67079775	67085453	A3SS	0.5	50	50	ENSMUST00000190932.7	ENSMUSG00000099570.7	Gm29000	chrY	transcribed_unprocessed_pseudogene	predicted gene 29000
chrY	67084937	67087034	-	67086549	67087034	A3SS&ES	0.25	50	50	ENSMUST00000190932.7	ENSMUSG00000099570.7	Gm29000	chrY	transcribed_unprocessed_pseudogene	predicted gene 29000
chrY	67086374	67087034	-	67086549	67087034	A3SS	0.25	50	50	ENSMUST00000190932.7	ENSMUSG00000099570.7	Gm29000	chrY	transcribed_unprocessed_pseudogene	predicted gene 29000
chrY	67087163	67089034	-	67079775	67089034	A3SS	0.33	50	50	ENSMUST00000185562.7	ENSMUSG00000099570.7	Gm29000	chrY	transcribed_unprocessed_pseudogene	predicted gene 29000
chrY	67087710	67089034	-	67079775	67089034	A3SS	0.33	50	50	ENSMUST00000185562.7	ENSMUSG00000099570.7	Gm29000	chrY	transcribed_unprocessed_pseudogene	predicted gene 29000
chrY	67079775	67085453	-	67079775	67089034	A5SS	0.5	50	50	ENSMUST00000185562.7	ENSMUSG00000099570.7	Gm29000	chrY	transcribed_unprocessed_pseudogene	predicted gene 29000
chrY	67084937;67085636	67085453;67087034	-	67084937	67087034	cassetteExon	0.5	100	100	ENSMUST00000187095.2	ENSMUSG00000099570.7	Gm29000	chrY	transcribed_unprocessed_pseudogene	predicted gene 29000
chrY	67086374	67087034	-	67084937	67087034	A3SS	0.25	50	50	ENSMUST00000187095.2	ENSMUSG00000099570.7	Gm29000	chrY	transcribed_unprocessed_pseudogene	predicted gene 29000
chrY	67087710	67089034	-	67087163	67089034	A3SS	0.5	50	50	ENSMUST00000187095.2	ENSMUSG00000099570.7	Gm29000	chrY	transcribed_unprocessed_pseudogene	predicted gene 29000
chrY	67085636	67087474	-	67085636	67087034	5pMXE	0.33	50	50	ENSMUST00000189332.7	ENSMUSG00000099570.7	Gm29000	chrY	transcribed_unprocessed_pseudogene	predicted gene 29000
chrY	67085636;67086374	67086332;67087034	-	67085636	67087034	cassetteExon	0.5	100	100	ENSMUST00000189332.7	ENSMUSG00000099570.7	Gm29000	chrY	transcribed_unprocessed_pseudogene	predicted gene 29000
chrY	67084937;67087163	67087034;67089034	-	67084937;67087710	67085453;67089034	MXE	0.5	100	100	ENSMUST00000187132.2	ENSMUSG00000099570.7	Gm29000	chrY	transcribed_unprocessed_pseudogene	predicted gene 29000
chrY	67085636;67087163	67087034;67089034	-	67085636;67087710	67087474;67089034	MXE	0.5	100	100	ENSMUST00000187132.2	ENSMUSG00000099570.7	Gm29000	chrY	transcribed_unprocessed_pseudogene	predicted gene 29000
chrY	67085636	67086332	-	67085636	67087474	A5SS	0.33	50	50	ENSMUST00000187132.2	ENSMUSG00000099570.7	Gm29000	chrY	transcribed_unprocessed_pseudogene	predicted gene 29000
chrY	67378110	67380207	-	67378110	67378626	5pMXE	0.33	50	50	ENSMUST00000187737.2	ENSMUSG00000101686.7	Gm29633	chrY	transcribed_unprocessed_pseudogene	predicted gene 29633
chrY	67378110	67382217	-	67378110	67378626	5pMXE	0.33	50	50	ENSMUST00000187737.2	ENSMUSG00000101686.7	Gm29633	chrY	transcribed_unprocessed_pseudogene	predicted gene 29633
chrY	67378110;67378809	67378626;67382217	-	67378110	67382217	cassetteExon	0.5	100	100	ENSMUST00000188751.2	ENSMUSG00000101686.7	Gm29633	chrY	transcribed_unprocessed_pseudogene	predicted gene 29633
chrY	67378110;67380337	67380207;67382217	-	67378110	67382217	cassetteExon	0.5	100	100	ENSMUST00000188751.2	ENSMUSG00000101686.7	Gm29633	chrY	transcribed_unprocessed_pseudogene	predicted gene 29633
chrY	67380884	67382217	-	67378110	67382217	A3SS	0.25	50	50	ENSMUST00000188751.2	ENSMUSG00000101686.7	Gm29633	chrY	transcribed_unprocessed_pseudogene	predicted gene 29633
chrY	67378809	67380207	-	67378809;67379722	67379505;67380207	ES	0.33	50	50	ENSMUST00000190523.7	ENSMUSG00000101686.7	Gm29633	chrY	transcribed_unprocessed_pseudogene	predicted gene 29633
chrY	67378809;67380884	67380648;67382217	-	67378809;67380337	67379505;67382217	MXE	0.5	100	100	ENSMUST00000190523.7	ENSMUSG00000101686.7	Gm29633	chrY	transcribed_unprocessed_pseudogene	predicted gene 29633
chrY	67378110	67380207	-	67378110;67378809	67378626;67380207	ES	0.33	50	50	ENSMUST00000186906.7	ENSMUSG00000101686.7	Gm29633	chrY	transcribed_unprocessed_pseudogene	predicted gene 29633
chrY	67378809	67380648	-	67378809	67380207	5pMXE	0.25	50	50	ENSMUST00000186906.7	ENSMUSG00000101686.7	Gm29633	chrY	transcribed_unprocessed_pseudogene	predicted gene 29633
chrY	67378809	67382217	-	67378809	67380207	5pMXE	0.25	50	50	ENSMUST00000186906.7	ENSMUSG00000101686.7	Gm29633	chrY	transcribed_unprocessed_pseudogene	predicted gene 29633
chrY	67378110;67378809	67378626;67382217	-	67378110;67380337	67380207;67382217	MXE	0.5	100	100	ENSMUST00000185572.2	ENSMUSG00000101686.7	Gm29633	chrY	transcribed_unprocessed_pseudogene	predicted gene 29633
chrY	67379722	67380207	-	67378110	67380207	A3SS	0.33	50	50	ENSMUST00000185572.2	ENSMUSG00000101686.7	Gm29633	chrY	transcribed_unprocessed_pseudogene	predicted gene 29633
chrY	67380884	67382217	-	67380337	67382217	A3SS	0.25	50	50	ENSMUST00000185572.2	ENSMUSG00000101686.7	Gm29633	chrY	transcribed_unprocessed_pseudogene	predicted gene 29633
chrY	67378809	67382217	-	67378809;67380884	67380648;67382217	ES	0.25	50	50	ENSMUST00000191172.2	ENSMUSG00000101686.7	Gm29633	chrY	transcribed_unprocessed_pseudogene	predicted gene 29633
chrY	67378110;67380337	67380207;67382217	-	67378110;67380884	67378626;67382217	MXE	0.5	100	100	ENSMUST00000191172.2	ENSMUSG00000101686.7	Gm29633	chrY	transcribed_unprocessed_pseudogene	predicted gene 29633
chrY	67378809;67380337	67380207;67382217	-	67378809;67380884	67380648;67382217	MXE	0.5	100	100	ENSMUST00000191172.2	ENSMUSG00000101686.7	Gm29633	chrY	transcribed_unprocessed_pseudogene	predicted gene 29633
chrY	67378809	67379505	-	67378809	67380648	A5SS	0.25	50	50	ENSMUST00000191172.2	ENSMUSG00000101686.7	Gm29633	chrY	transcribed_unprocessed_pseudogene	predicted gene 29633
chrY	67378110	67382217	-	67378809	67382217	3pMXE	0.25	50	50	ENSMUST00000189561.2	ENSMUSG00000101686.7	Gm29633	chrY	transcribed_unprocessed_pseudogene	predicted gene 29633
chrY	67378809;67380337	67380207;67382217	-	67378809	67382217	cassetteExon	0.5	100	100	ENSMUST00000189561.2	ENSMUSG00000101686.7	Gm29633	chrY	transcribed_unprocessed_pseudogene	predicted gene 29633
chrY	67378809	67379505	-	67378809	67382217	A5SS	0.25	50	50	ENSMUST00000189561.2	ENSMUSG00000101686.7	Gm29633	chrY	transcribed_unprocessed_pseudogene	predicted gene 29633
chrY	67481368	67482808	-	67481368;67482078	67481895;67482808	ES	0.5	50	50	ENSMUST00000187224.2	ENSMUSG00000101313.2	Gm29219	chrY	lncRNA	predicted gene 29219
chrY	67482989	67483479	-	67482993	67483479	A3SS	0.5	50	50	ENSMUST00000187224.2	ENSMUSG00000101313.2	Gm29219	chrY	lncRNA	predicted gene 29219
chrY	67690529	67691969	-	67690529;67691239	67691056;67691969	ES	0.5	50	50	ENSMUST00000191270.2	ENSMUSG00000101794.2	Gm29217	chrY	lncRNA	predicted gene 29217
chrY	67692150	67692640	-	67692154	67692640	A3SS	0.5	50	50	ENSMUST00000191270.2	ENSMUSG00000101794.2	Gm29217	chrY	lncRNA	predicted gene 29217
chrY	67929279	67930588	+	67929279	67938278	A3SS	0.33	50	50	ENSMUST00000191419.2	ENSMUSG00000101164.7	Gm29218	chrY	transcribed_unprocessed_pseudogene	predicted gene 29218
chrY	67929279	67932663	+	67929279	67938278	A3SS	0.33	50	50	ENSMUST00000191419.2	ENSMUSG00000101164.7	Gm29218	chrY	transcribed_unprocessed_pseudogene	predicted gene 29218
chrY	67929279	67932663	+	67929279;67930824	67930588;67932663	ES	0.25	50	50	ENSMUST00000191168.7	ENSMUSG00000101164.7	Gm29218	chrY	transcribed_unprocessed_pseudogene	predicted gene 29218
chrY	67931265	67932663	+	67930824	67932663	A5SS	0.25	50	50	ENSMUST00000191168.7	ENSMUSG00000101164.7	Gm29218	chrY	transcribed_unprocessed_pseudogene	predicted gene 29218
chrY	67931265	67933362	+	67932846	67933362	A5SS&ES	0.5	50	50	ENSMUST00000191168.7	ENSMUSG00000101164.7	Gm29218	chrY	transcribed_unprocessed_pseudogene	predicted gene 29218
chrY	67931967	67932663	+	67930824	67932663	A5SS	0.25	50	50	ENSMUST00000191168.7	ENSMUSG00000101164.7	Gm29218	chrY	transcribed_unprocessed_pseudogene	predicted gene 29218
chrY	67931265	67932663	+	67929279	67932663	A5SS	0.25	50	50	ENSMUST00000186953.2	ENSMUSG00000101164.7	Gm29218	chrY	transcribed_unprocessed_pseudogene	predicted gene 29218
chrY	67931967	67932663	+	67929279	67932663	A5SS	0.25	50	50	ENSMUST00000186953.2	ENSMUSG00000101164.7	Gm29218	chrY	transcribed_unprocessed_pseudogene	predicted gene 29218
chrY	67931265	67932663	+	67931265;67931967	67931925;67932663	ES	0.5	50	50	ENSMUST00000190454.7	ENSMUSG00000101164.7	Gm29218	chrY	transcribed_unprocessed_pseudogene	predicted gene 29218
chrY	67931265	67931750	+	67931265	67931925	A3SS	0.33	50	50	ENSMUST00000190454.7	ENSMUSG00000101164.7	Gm29218	chrY	transcribed_unprocessed_pseudogene	predicted gene 29218
chrY	67931265	67932663	+	67931265;67931967	67931750;67932663	ES	0.5	50	50	ENSMUST00000185344.7	ENSMUSG00000101164.7	Gm29218	chrY	transcribed_unprocessed_pseudogene	predicted gene 29218
chrY	67931265	67933362	+	67931265;67932846	67932663;67933362	ES	0.5	50	50	ENSMUST00000189610.7	ENSMUSG00000101164.7	Gm29218	chrY	transcribed_unprocessed_pseudogene	predicted gene 29218
chrY	67931265	67931750	+	67931265	67933362	A3SS	0.25	50	50	ENSMUST00000191342.2	ENSMUSG00000101164.7	Gm29218	chrY	transcribed_unprocessed_pseudogene	predicted gene 29218
chrY	67931265	67931925	+	67931265	67933362	A3SS	0.25	50	50	ENSMUST00000191342.2	ENSMUSG00000101164.7	Gm29218	chrY	transcribed_unprocessed_pseudogene	predicted gene 29218
chrY	68143380	68144820	-	68143380;68144090	68143907;68144820	ES	0.5	50	50	ENSMUST00000185620.2	ENSMUSG00000099501.2	Gm29662	chrY	lncRNA	predicted gene 29662
chrY	68145001	68145491	-	68145005	68145491	A3SS	0.5	50	50	ENSMUST00000185620.2	ENSMUSG00000099501.2	Gm29662	chrY	lncRNA	predicted gene 29662
chrY	68291490	68298528	-	68283618	68298528	A3SS	0.5	50	50	ENSMUST00000189084.7	ENSMUSG00000096016.8	Gm20937	chrY	protein_coding	predicted gene, 20937
chrY	68283618	68290812	-	68283618	68298528	A5SS	0.5	50	50	ENSMUST00000189084.7	ENSMUSG00000096016.8	Gm20937	chrY	protein_coding	predicted gene, 20937
chrY	68365606	68367046	-	68365606;68366316	68366133;68367046	ES	0.5	50	50	ENSMUST00000189657.2	ENSMUSG00000101861.2	Gm29450	chrY	lncRNA	predicted gene 29450
chrY	68367227	68367717	-	68367231	68367717	A3SS	0.5	50	50	ENSMUST00000189657.2	ENSMUSG00000101861.2	Gm29450	chrY	lncRNA	predicted gene 29450
chrY	68679363	68680803	-	68679363;68680073	68679890;68680803	ES	0.5	50	50	ENSMUST00000186407.2	ENSMUSG00000101393.2	Gm29447	chrY	lncRNA	predicted gene 29447
chrY	68680984	68681474	-	68680988	68681474	A3SS	0.5	50	50	ENSMUST00000186407.2	ENSMUSG00000101393.2	Gm29447	chrY	lncRNA	predicted gene 29447
chrY	68911464	68911954	-	68911468	68911954	A3SS	0.5	50	50	ENSMUST00000190867.2	ENSMUSG00000101080.2	Gm28633	chrY	lncRNA	predicted gene 28633
chrY	68998010;69001581	69001398;69007243	+	68998010	69007243	cassetteExon	0.5	100	100	ENSMUST00000186691.7	ENSMUSG00000101106.7	Gm28819	chrY	transcribed_unprocessed_pseudogene	predicted gene 28819
chrY	68998010	68999323	+	68998010	69007243	A3SS	0.25	50	50	ENSMUST00000186691.7	ENSMUSG00000101106.7	Gm28819	chrY	transcribed_unprocessed_pseudogene	predicted gene 28819
chrY	68998010	69000485	+	68998010	69007243	A3SS	0.25	50	50	ENSMUST00000186691.7	ENSMUSG00000101106.7	Gm28819	chrY	transcribed_unprocessed_pseudogene	predicted gene 28819
chrY	68998010	69001398	+	68998010;68999559	68999323;69001398	ES	0.25	50	50	ENSMUST00000188291.7	ENSMUSG00000101106.7	Gm28819	chrY	transcribed_unprocessed_pseudogene	predicted gene 28819
chrY	69001581	69007243	+	69001581	69002097	3pMXE	0.5	50	50	ENSMUST00000188291.7	ENSMUSG00000101106.7	Gm28819	chrY	transcribed_unprocessed_pseudogene	predicted gene 28819
chrY	68998010;69000702	69000485;69001398	+	68998010;68999559	68999323;69001398	MXE	0.5	100	100	ENSMUST00000188291.7	ENSMUSG00000101106.7	Gm28819	chrY	transcribed_unprocessed_pseudogene	predicted gene 28819
chrY	69000000	69001398	+	68999559	69001398	A5SS	0.25	50	50	ENSMUST00000188291.7	ENSMUSG00000101106.7	Gm28819	chrY	transcribed_unprocessed_pseudogene	predicted gene 28819
chrY	68998010;69000702	69000485;69001398	+	68998010	69001398	cassetteExon	0.5	100	100	ENSMUST00000190079.7	ENSMUSG00000101106.7	Gm28819	chrY	transcribed_unprocessed_pseudogene	predicted gene 28819
chrY	69000000	69001398	+	68998010	69001398	A5SS	0.25	50	50	ENSMUST00000190079.7	ENSMUSG00000101106.7	Gm28819	chrY	transcribed_unprocessed_pseudogene	predicted gene 28819
chrY	69000000	69000485	+	68998010	69000485	A5SS	0.5	50	50	ENSMUST00000187843.7	ENSMUSG00000101106.7	Gm28819	chrY	transcribed_unprocessed_pseudogene	predicted gene 28819
chrY	69000000	69001398	+	69000702	69001398	A5SS&ES	0.25	50	50	ENSMUST00000187843.7	ENSMUSG00000101106.7	Gm28819	chrY	transcribed_unprocessed_pseudogene	predicted gene 28819
chrY	69000000;69000702	69000485;69001398	+	69000000	69001398	cassetteExon	0.5	100	100	ENSMUST00000190333.7	ENSMUSG00000101106.7	Gm28819	chrY	transcribed_unprocessed_pseudogene	predicted gene 28819
chrY	68998010	69001398	+	69000702	69001398	5pMXE	0.25	50	50	ENSMUST00000187416.2	ENSMUSG00000101106.7	Gm28819	chrY	transcribed_unprocessed_pseudogene	predicted gene 28819
chrY	68999559	69001398	+	69000702	69001398	5pMXE	0.25	50	50	ENSMUST00000187416.2	ENSMUSG00000101106.7	Gm28819	chrY	transcribed_unprocessed_pseudogene	predicted gene 28819
chrY	69011358	69012545	-	69011358	69012723	A5SS	0.5	50	50	ENSMUST00000188058.7	ENSMUSG00000102119.7	Gm28462	chrY	lncRNA	predicted gene 28462
chrY	69212691	69214131	-	69212691;69213401	69213218;69214131	ES	0.5	50	50	ENSMUST00000189623.7	ENSMUSG00000102005.7	Gm29409	chrY	lncRNA	predicted gene 29409
chrY	69253275	69254716	-	69253275;69253986	69253803;69254716	ES	0.5	50	50	ENSMUST00000191193.2	ENSMUSG00000101491.2	Gm28632	chrY	lncRNA	predicted gene 28632
chrY	69254897	69255387	-	69254901	69255387	A3SS	0.5	50	50	ENSMUST00000191193.2	ENSMUSG00000101491.2	Gm28632	chrY	lncRNA	predicted gene 28632
chrY	69332592	69333939	+	69332592;69333003	69332817;69333939	ES	0.5	50	50	ENSMUST00000195574.2	ENSMUSG00000102388.6	Gm33815	chrY	protein_coding	predicted gene, 33815
chrY	69332592	69334486	+	69332592	69332817	A3SS&ES	0.33	50	50	ENSMUST00000195574.2	ENSMUSG00000102388.6	Gm33815	chrY	protein_coding	predicted gene, 33815
chrY	69334615	69336012	+	69334615;69335316	69335100;69336012	ES	0.33	50	50	ENSMUST00000195504.6	ENSMUSG00000102388.6	Gm33815	chrY	protein_coding	predicted gene, 33815
chrY	69332592;69334175	69333939;69336012	+	69332592;69335316	69334486;69336012	MXE	0.5	100	100	ENSMUST00000195504.6	ENSMUSG00000102388.6	Gm33815	chrY	protein_coding	predicted gene, 33815
chrY	69336195	69336711	+	69336195	69341905	A3SS	0.5	50	50	ENSMUST00000195504.6	ENSMUSG00000102388.6	Gm33815	chrY	protein_coding	predicted gene, 33815
chrY	69332592;69334615	69334486;69336012	+	69332592;69334175	69333939;69336012	MXE	0.5	100	100	ENSMUST00000193593.6	ENSMUSG00000102388.6	Gm33815	chrY	protein_coding	predicted gene, 33815
chrY	69335316	69336012	+	69334175	69336012	A5SS	0.33	50	50	ENSMUST00000193593.6	ENSMUSG00000102388.6	Gm33815	chrY	protein_coding	predicted gene, 33815
chrY	69334175	69336012	+	69334615	69336012	5pMXE	0.33	50	50	ENSMUST00000194063.2	ENSMUSG00000102388.6	Gm33815	chrY	protein_coding	predicted gene, 33815
chrY	69814422	69815862	+	69814422;69815335	69815152;69815862	ES	0.5	50	50	ENSMUST00000185321.2	ENSMUSG00000099555.2	Gm28081	chrY	lncRNA	predicted gene 28081
chrY	69813751	69814241	+	69813751	69814237	A3SS	0.5	50	50	ENSMUST00000185321.2	ENSMUSG00000099555.2	Gm28081	chrY	lncRNA	predicted gene 28081
chrY	70022572	70023970	-	70022572;70023485	70023268;70023970	ES	0.33	50	50	ENSMUST00000185688.7	ENSMUSG00000099550.7	Gm28079	chrY	protein_coding	predicted gene 28079
chrY	70023485	70025977	-	70023485;70024099	70023970;70025977	ES	0.16	50	50	ENSMUST00000185688.7	ENSMUSG00000099550.7	Gm28079	chrY	protein_coding	predicted gene 28079
chrY	70022572;70024646	70024410;70025977	-	70022572;70024099	70023268;70025977	MXE	0.5	100	100	ENSMUST00000185688.7	ENSMUSG00000099550.7	Gm28079	chrY	protein_coding	predicted gene 28079
chrY	70021873	70022389	-	70016702	70022389	A3SS	0.5	50	50	ENSMUST00000185688.7	ENSMUSG00000099550.7	Gm28079	chrY	protein_coding	predicted gene 28079
chrY	70021873	70023970	-	70023485	70023970	A3SS&ES	0.33	50	50	ENSMUST00000185688.7	ENSMUSG00000099550.7	Gm28079	chrY	protein_coding	predicted gene 28079
chrY	70021873	70025977	-	70024099	70025977	A3SS&ES	0.16	50	50	ENSMUST00000185688.7	ENSMUSG00000099550.7	Gm28079	chrY	protein_coding	predicted gene 28079
chrY	70025752	70025977	-	70024099	70025977	A3SS	0.16	50	50	ENSMUST00000185688.7	ENSMUSG00000099550.7	Gm28079	chrY	protein_coding	predicted gene 28079
chrY	70021873	70025977	-	70021873;70024099	70023970;70025977	ES	0.16	50	50	ENSMUST00000186763.7	ENSMUSG00000099550.7	Gm28079	chrY	protein_coding	predicted gene 28079
chrY	70021873;70022572	70022389;70023970	-	70021873	70023970	cassetteExon	0.5	100	100	ENSMUST00000186763.7	ENSMUSG00000099550.7	Gm28079	chrY	protein_coding	predicted gene 28079
chrY	70021873;70022572	70022389;70025977	-	70021873;70024099	70023970;70025977	MXE	0.5	100	100	ENSMUST00000186763.7	ENSMUSG00000099550.7	Gm28079	chrY	protein_coding	predicted gene 28079
chrY	70023485	70025977	-	70024099	70025977	A3SS&ES	0.16	50	50	ENSMUST00000186763.7	ENSMUSG00000099550.7	Gm28079	chrY	protein_coding	predicted gene 28079
chrY	70024646	70025977	-	70024099	70025977	A3SS	0.16	50	50	ENSMUST00000186763.7	ENSMUSG00000099550.7	Gm28079	chrY	protein_coding	predicted gene 28079
chrY	70021873	70025977	-	70021873;70022572	70022389;70025977	ES	0.16	50	50	ENSMUST00000188634.7	ENSMUSG00000099550.7	Gm28079	chrY	protein_coding	predicted gene 28079
chrY	70022572;70023485	70023268;70025977	-	70022572	70025977	cassetteExon	0.5	100	100	ENSMUST00000188634.7	ENSMUSG00000099550.7	Gm28079	chrY	protein_coding	predicted gene 28079
chrY	70022572;70024099	70023970;70025977	-	70022572	70025977	cassetteExon	0.5	100	100	ENSMUST00000188634.7	ENSMUSG00000099550.7	Gm28079	chrY	protein_coding	predicted gene 28079
chrY	70022572;70024646	70024410;70025977	-	70022572	70025977	cassetteExon	0.5	100	100	ENSMUST00000188634.7	ENSMUSG00000099550.7	Gm28079	chrY	protein_coding	predicted gene 28079
chrY	70025752	70025977	-	70022572	70025977	A3SS	0.16	50	50	ENSMUST00000188634.7	ENSMUSG00000099550.7	Gm28079	chrY	protein_coding	predicted gene 28079
chrY	70022572	70024410	-	70022572	70023970	5pMXE	0.25	50	50	ENSMUST00000187271.7	ENSMUSG00000099550.7	Gm28079	chrY	protein_coding	predicted gene 28079
chrY	70022572	70025977	-	70022572	70023970	5pMXE	0.25	50	50	ENSMUST00000187271.7	ENSMUSG00000099550.7	Gm28079	chrY	protein_coding	predicted gene 28079
chrY	70023485	70025977	-	70021873	70025977	A3SS	0.16	50	50	ENSMUST00000186184.7	ENSMUSG00000099550.7	Gm28079	chrY	protein_coding	predicted gene 28079
chrY	70024646	70025977	-	70021873	70025977	A3SS	0.16	50	50	ENSMUST00000186184.7	ENSMUSG00000099550.7	Gm28079	chrY	protein_coding	predicted gene 28079
chrY	70025752	70025977	-	70021873	70025977	A3SS	0.16	50	50	ENSMUST00000186184.7	ENSMUSG00000099550.7	Gm28079	chrY	protein_coding	predicted gene 28079
chrY	70022572;70023485	70023268;70025977	-	70022572;70024646	70024410;70025977	MXE	0.5	100	100	ENSMUST00000190418.2	ENSMUSG00000099550.7	Gm28079	chrY	protein_coding	predicted gene 28079
chrY	70021873;70024099	70023970;70025977	-	70021873;70024646	70022389;70025977	MXE	0.5	100	100	ENSMUST00000190418.2	ENSMUSG00000099550.7	Gm28079	chrY	protein_coding	predicted gene 28079
chrY	70022572;70024099	70023970;70025977	-	70022572;70024646	70024410;70025977	MXE	0.5	100	100	ENSMUST00000190418.2	ENSMUSG00000099550.7	Gm28079	chrY	protein_coding	predicted gene 28079
chrY	70024646;70025752	70025566;70025977	-	70024646	70025977	cassetteExon	0.5	100	100	ENSMUST00000190418.2	ENSMUSG00000099550.7	Gm28079	chrY	protein_coding	predicted gene 28079
chrY	70022572;70024099	70023970;70025977	-	70022572;70023485	70023268;70025977	MXE	0.5	100	100	ENSMUST00000186006.2	ENSMUSG00000099550.7	Gm28079	chrY	protein_coding	predicted gene 28079
chrY	70025752	70025977	-	70023485	70025977	A3SS	0.2	50	50	ENSMUST00000186006.2	ENSMUSG00000099550.7	Gm28079	chrY	protein_coding	predicted gene 28079
chrY	70102473	70103913	+	70102473;70103386	70103203;70103913	ES	0.5	50	50	ENSMUST00000185683.2	ENSMUSG00000100278.2	Gm28082	chrY	lncRNA	predicted gene 28082
chrY	70101802	70102292	+	70101802	70102288	A3SS	0.5	50	50	ENSMUST00000185683.2	ENSMUSG00000100278.2	Gm28082	chrY	lncRNA	predicted gene 28082
chrY	70313086	70314421	-	70313086;70314196	70314010;70314421	ES	0.2	50	50	ENSMUST00000189003.2	ENSMUSG00000099530.2	Gm29644	chrY	protein_coding	predicted gene 29644
chrY	70305149	70314421	-	70314196	70314421	A3SS&ES	0.2	50	50	ENSMUST00000189003.2	ENSMUSG00000099530.2	Gm29644	chrY	protein_coding	predicted gene 29644
chrY	70311011	70314421	-	70314196	70314421	A3SS&ES	0.2	50	50	ENSMUST00000189003.2	ENSMUSG00000099530.2	Gm29644	chrY	protein_coding	predicted gene 29644
chrY	70312539	70314421	-	70314196	70314421	A3SS&ES	0.2	50	50	ENSMUST00000189003.2	ENSMUSG00000099530.2	Gm29644	chrY	protein_coding	predicted gene 29644
chrY	70305149;70311011	70310828;70314421	-	70305149	70314421	cassetteExon	0.5	100	100	ENSMUST00000189006.7	ENSMUSG00000101725.7	Gm29423	chrY	protein_coding	predicted gene 29423
chrY	70312539	70314421	-	70305149	70314421	A3SS	0.2	50	50	ENSMUST00000189006.7	ENSMUSG00000101725.7	Gm29423	chrY	protein_coding	predicted gene 29423
chrY	70313086	70314421	-	70305149	70314421	A3SS	0.2	50	50	ENSMUST00000189006.7	ENSMUSG00000101725.7	Gm29423	chrY	protein_coding	predicted gene 29423
chrY	70311011	70312409	-	70311011;70311924	70311707;70312409	ES	0.25	50	50	ENSMUST00000190274.7	ENSMUSG00000101725.7	Gm29423	chrY	protein_coding	predicted gene 29423
chrY	70311011;70313086	70312850;70314421	-	70311011;70312539	70311707;70314421	MXE	0.5	100	100	ENSMUST00000190274.7	ENSMUSG00000101725.7	Gm29423	chrY	protein_coding	predicted gene 29423
chrY	70310312	70310828	-	70305149	70310828	A3SS	0.5	50	50	ENSMUST00000190274.7	ENSMUSG00000101725.7	Gm29423	chrY	protein_coding	predicted gene 29423
chrY	70310312	70312409	-	70311924	70312409	A3SS&ES	0.25	50	50	ENSMUST00000190274.7	ENSMUSG00000101725.7	Gm29423	chrY	protein_coding	predicted gene 29423
chrY	70311749	70312409	-	70311924	70312409	A3SS	0.25	50	50	ENSMUST00000190274.7	ENSMUSG00000101725.7	Gm29423	chrY	protein_coding	predicted gene 29423
chrY	70310312;70312539	70312409;70314421	-	70310312;70311011	70310828;70314421	MXE	0.5	100	100	ENSMUST00000185877.7	ENSMUSG00000101725.7	Gm29423	chrY	protein_coding	predicted gene 29423
chrY	70311011;70312539	70312409;70314421	-	70311011	70314421	cassetteExon	0.5	100	100	ENSMUST00000185877.7	ENSMUSG00000101725.7	Gm29423	chrY	protein_coding	predicted gene 29423
chrY	70311011;70313086	70312850;70314421	-	70311011	70314421	cassetteExon	0.5	100	100	ENSMUST00000185877.7	ENSMUSG00000101725.7	Gm29423	chrY	protein_coding	predicted gene 29423
chrY	70311011	70311707	-	70311011	70314421	A5SS	0.25	50	50	ENSMUST00000185877.7	ENSMUSG00000101725.7	Gm29423	chrY	protein_coding	predicted gene 29423
chrY	70310312	70312409	-	70310312;70311011	70310828;70312409	ES	0.25	50	50	ENSMUST00000187904.7	ENSMUSG00000101725.7	Gm29423	chrY	protein_coding	predicted gene 29423
chrY	70311011	70312850	-	70311011	70312409	5pMXE	0.25	50	50	ENSMUST00000187904.7	ENSMUSG00000101725.7	Gm29423	chrY	protein_coding	predicted gene 29423
chrY	70311011	70314421	-	70311011	70312409	5pMXE	0.25	50	50	ENSMUST00000187904.7	ENSMUSG00000101725.7	Gm29423	chrY	protein_coding	predicted gene 29423
chrY	70311011;70311749	70311707;70312409	-	70311011	70312409	cassetteExon	0.5	100	100	ENSMUST00000187904.7	ENSMUSG00000101725.7	Gm29423	chrY	protein_coding	predicted gene 29423
chrY	70311749	70312409	-	70310312	70312409	A3SS	0.25	50	50	ENSMUST00000189580.2	ENSMUSG00000101725.7	Gm29423	chrY	protein_coding	predicted gene 29423
chrY	70313086	70314421	-	70312539	70314421	A3SS	0.25	50	50	ENSMUST00000189580.2	ENSMUSG00000101725.7	Gm29423	chrY	protein_coding	predicted gene 29423
chrY	70310312;70312539	70312409;70314421	-	70310312;70313086	70310828;70314421	MXE	0.5	100	100	ENSMUST00000188222.2	ENSMUSG00000101725.7	Gm29423	chrY	protein_coding	predicted gene 29423
chrY	70311011;70312539	70312409;70314421	-	70311011;70313086	70312850;70314421	MXE	0.5	100	100	ENSMUST00000188222.2	ENSMUSG00000101725.7	Gm29423	chrY	protein_coding	predicted gene 29423
chrY	70311011	70311707	-	70311011	70312850	A5SS	0.25	50	50	ENSMUST00000188222.2	ENSMUSG00000101725.7	Gm29423	chrY	protein_coding	predicted gene 29423
chrY	70392342	70393782	+	70392342;70393254	70393071;70393782	ES	0.5	50	50	ENSMUST00000189421.2	ENSMUSG00000101440.2	Gm29425	chrY	lncRNA	predicted gene 29425
chrY	70391671	70392161	+	70391671	70392157	A3SS	0.5	50	50	ENSMUST00000189421.2	ENSMUSG00000101440.2	Gm29425	chrY	lncRNA	predicted gene 29425
chrY	70460806	70467851	+	70460806	70475718	A3SS	0.5	50	50	ENSMUST00000178934.2	ENSMUSG00000094616.8	Gm20888	chrY	protein_coding	predicted gene, 20888
chrY	70468531	70475718	+	70460806	70475718	A5SS	0.5	50	50	ENSMUST00000178934.2	ENSMUSG00000094616.8	Gm20888	chrY	protein_coding	predicted gene, 20888
chrY	70608037	70609477	+	70608037;70608950	70608767;70609477	ES	0.5	50	50	ENSMUST00000185237.2	ENSMUSG00000101627.2	Gm28432	chrY	lncRNA	predicted gene 28432
chrY	70607366	70607856	+	70607366	70607852	A3SS	0.5	50	50	ENSMUST00000185237.2	ENSMUSG00000101627.2	Gm28432	chrY	lncRNA	predicted gene 28432
chrY	70819642	70823738	-	70814492	70823738	A3SS	0.25	50	50	ENSMUST00000191514.7	ENSMUSG00000101786.7	Gm28840	chrY	transcribed_unprocessed_pseudogene	predicted gene 28840
chrY	70821869	70823738	-	70814492	70823738	A3SS	0.25	50	50	ENSMUST00000191514.7	ENSMUSG00000101786.7	Gm28840	chrY	transcribed_unprocessed_pseudogene	predicted gene 28840
chrY	70822416	70823738	-	70814492	70823738	A3SS	0.25	50	50	ENSMUST00000191514.7	ENSMUSG00000101786.7	Gm28840	chrY	transcribed_unprocessed_pseudogene	predicted gene 28840
chrY	70814492	70820158	-	70814492	70823738	A5SS	0.5	50	50	ENSMUST00000191514.7	ENSMUSG00000101786.7	Gm28840	chrY	transcribed_unprocessed_pseudogene	predicted gene 28840
chrY	70820341	70821739	-	70820341;70821254	70821037;70821739	ES	0.25	50	50	ENSMUST00000187128.7	ENSMUSG00000101786.7	Gm28840	chrY	transcribed_unprocessed_pseudogene	predicted gene 28840
chrY	70820341;70822416	70822180;70823738	-	70820341;70821869	70821037;70823738	MXE	0.5	100	100	ENSMUST00000187128.7	ENSMUSG00000101786.7	Gm28840	chrY	transcribed_unprocessed_pseudogene	predicted gene 28840
chrY	70819642	70820158	-	70814492	70820158	A3SS	0.5	50	50	ENSMUST00000187128.7	ENSMUSG00000101786.7	Gm28840	chrY	transcribed_unprocessed_pseudogene	predicted gene 28840
chrY	70819642	70821739	-	70821254	70821739	A3SS&ES	0.25	50	50	ENSMUST00000187128.7	ENSMUSG00000101786.7	Gm28840	chrY	transcribed_unprocessed_pseudogene	predicted gene 28840
chrY	70819642	70823738	-	70821869	70823738	A3SS&ES	0.25	50	50	ENSMUST00000187128.7	ENSMUSG00000101786.7	Gm28840	chrY	transcribed_unprocessed_pseudogene	predicted gene 28840
chrY	70821079	70821739	-	70821254	70821739	A3SS	0.25	50	50	ENSMUST00000187128.7	ENSMUSG00000101786.7	Gm28840	chrY	transcribed_unprocessed_pseudogene	predicted gene 28840
chrY	70819642;70821869	70821739;70823738	-	70819642	70823738	cassetteExon	0.5	100	100	ENSMUST00000185850.2	ENSMUSG00000101786.7	Gm28840	chrY	transcribed_unprocessed_pseudogene	predicted gene 28840
chrY	70822416	70823738	-	70819642	70823738	A3SS	0.25	50	50	ENSMUST00000185850.2	ENSMUSG00000101786.7	Gm28840	chrY	transcribed_unprocessed_pseudogene	predicted gene 28840
chrY	70819642	70820158	-	70819642	70823738	A5SS	0.33	50	50	ENSMUST00000185850.2	ENSMUSG00000101786.7	Gm28840	chrY	transcribed_unprocessed_pseudogene	predicted gene 28840
chrY	70819642	70821739	-	70819642;70820341	70820158;70821739	ES	0.25	50	50	ENSMUST00000191421.7	ENSMUSG00000101786.7	Gm28840	chrY	transcribed_unprocessed_pseudogene	predicted gene 28840
chrY	70820341	70822180	-	70820341	70821739	5pMXE	0.33	50	50	ENSMUST00000191421.7	ENSMUSG00000101786.7	Gm28840	chrY	transcribed_unprocessed_pseudogene	predicted gene 28840
chrY	70820341;70821079	70821037;70821739	-	70820341	70821739	cassetteExon	0.5	100	100	ENSMUST00000191421.7	ENSMUSG00000101786.7	Gm28840	chrY	transcribed_unprocessed_pseudogene	predicted gene 28840
chrY	70821079	70821739	-	70819642	70821739	A3SS	0.25	50	50	ENSMUST00000190021.7	ENSMUSG00000101786.7	Gm28840	chrY	transcribed_unprocessed_pseudogene	predicted gene 28840
chrY	70822416	70823738	-	70821869	70823738	A3SS	0.33	50	50	ENSMUST00000190021.7	ENSMUSG00000101786.7	Gm28840	chrY	transcribed_unprocessed_pseudogene	predicted gene 28840
chrY	70819642;70821869	70821739;70823738	-	70819642;70822416	70820158;70823738	MXE	0.5	100	100	ENSMUST00000189110.2	ENSMUSG00000101786.7	Gm28840	chrY	transcribed_unprocessed_pseudogene	predicted gene 28840
chrY	70820341;70821869	70821739;70823738	-	70820341;70822416	70822180;70823738	MXE	0.5	100	100	ENSMUST00000189110.2	ENSMUSG00000101786.7	Gm28840	chrY	transcribed_unprocessed_pseudogene	predicted gene 28840
chrY	70820341	70821037	-	70820341	70822180	A5SS	0.33	50	50	ENSMUST00000189110.2	ENSMUSG00000101786.7	Gm28840	chrY	transcribed_unprocessed_pseudogene	predicted gene 28840
chrY	70903277	70904718	+	70903277;70904191	70904008;70904718	ES	0.5	50	50	ENSMUST00000190289.2	ENSMUSG00000099704.2	Gm28842	chrY	lncRNA	predicted gene 28842
chrY	70902606	70903096	+	70902606	70903092	A3SS	0.5	50	50	ENSMUST00000190289.2	ENSMUSG00000099704.2	Gm28842	chrY	lncRNA	predicted gene 28842
chrY	71336857	71340934	-	71331710	71340934	A3SS	0.2	50	50	ENSMUST00000189297.2	ENSMUSG00000101374.7	Gm28844	chrY	transcribed_processed_pseudogene	predicted gene 28844
chrY	71337556	71340934	-	71331710	71340934	A3SS	0.2	50	50	ENSMUST00000189297.2	ENSMUSG00000101374.7	Gm28844	chrY	transcribed_processed_pseudogene	predicted gene 28844
chrY	71339084	71340934	-	71331710	71340934	A3SS	0.2	50	50	ENSMUST00000189297.2	ENSMUSG00000101374.7	Gm28844	chrY	transcribed_processed_pseudogene	predicted gene 28844
chrY	71339631	71340934	-	71331710	71340934	A3SS	0.2	50	50	ENSMUST00000189297.2	ENSMUSG00000101374.7	Gm28844	chrY	transcribed_processed_pseudogene	predicted gene 28844
chrY	71336857	71340934	-	71336857;71337556	71337373;71340934	ES	0.25	50	50	ENSMUST00000189411.7	ENSMUSG00000101374.7	Gm28844	chrY	transcribed_processed_pseudogene	predicted gene 28844
chrY	71336857;71339084	71338954;71340934	-	71336857;71337556	71337373;71340934	MXE	0.5	100	100	ENSMUST00000189411.7	ENSMUSG00000101374.7	Gm28844	chrY	transcribed_processed_pseudogene	predicted gene 28844
chrY	71337556;71339084	71338954;71340934	-	71337556	71340934	cassetteExon	0.5	100	100	ENSMUST00000189411.7	ENSMUSG00000101374.7	Gm28844	chrY	transcribed_processed_pseudogene	predicted gene 28844
chrY	71337556;71339631	71339395;71340934	-	71337556	71340934	cassetteExon	0.5	100	100	ENSMUST00000189411.7	ENSMUSG00000101374.7	Gm28844	chrY	transcribed_processed_pseudogene	predicted gene 28844
chrY	71337556	71338252	-	71337556	71340934	A5SS	0.25	50	50	ENSMUST00000189411.7	ENSMUSG00000101374.7	Gm28844	chrY	transcribed_processed_pseudogene	predicted gene 28844
chrY	71336857;71339084	71338954;71340934	-	71336857	71340934	cassetteExon	0.5	100	100	ENSMUST00000186680.7	ENSMUSG00000101374.7	Gm28844	chrY	transcribed_processed_pseudogene	predicted gene 28844
chrY	71339631	71340934	-	71336857	71340934	A3SS	0.2	50	50	ENSMUST00000186680.7	ENSMUSG00000101374.7	Gm28844	chrY	transcribed_processed_pseudogene	predicted gene 28844
chrY	71336857;71339084	71338954;71340934	-	71336857;71339631	71337373;71340934	MXE	0.5	100	100	ENSMUST00000188806.7	ENSMUSG00000101374.7	Gm28844	chrY	transcribed_processed_pseudogene	predicted gene 28844
chrY	71337556;71339084	71338954;71340934	-	71337556;71339631	71339395;71340934	MXE	0.5	100	100	ENSMUST00000188806.7	ENSMUSG00000101374.7	Gm28844	chrY	transcribed_processed_pseudogene	predicted gene 28844
chrY	71337556	71338252	-	71337556	71339395	A5SS	0.25	50	50	ENSMUST00000188806.7	ENSMUSG00000101374.7	Gm28844	chrY	transcribed_processed_pseudogene	predicted gene 28844
chrY	71337556	71338954	-	71337556;71338469	71338252;71338954	ES	0.25	50	50	ENSMUST00000189667.7	ENSMUSG00000101374.7	Gm28844	chrY	transcribed_processed_pseudogene	predicted gene 28844
chrY	71337556;71339631	71339395;71340934	-	71337556;71339084	71338252;71340934	MXE	0.5	100	100	ENSMUST00000189667.7	ENSMUSG00000101374.7	Gm28844	chrY	transcribed_processed_pseudogene	predicted gene 28844
chrY	71338294	71338954	-	71338469	71338954	A3SS	0.25	50	50	ENSMUST00000189667.7	ENSMUSG00000101374.7	Gm28844	chrY	transcribed_processed_pseudogene	predicted gene 28844
chrY	71336857	71338954	-	71336857;71337556	71337373;71338954	ES	0.25	50	50	ENSMUST00000188713.7	ENSMUSG00000101374.7	Gm28844	chrY	transcribed_processed_pseudogene	predicted gene 28844
chrY	71337556	71339395	-	71337556	71338954	5pMXE	0.25	50	50	ENSMUST00000188713.7	ENSMUSG00000101374.7	Gm28844	chrY	transcribed_processed_pseudogene	predicted gene 28844
chrY	71337556	71340934	-	71337556	71338954	5pMXE	0.25	50	50	ENSMUST00000188713.7	ENSMUSG00000101374.7	Gm28844	chrY	transcribed_processed_pseudogene	predicted gene 28844
chrY	71337556;71338294	71338252;71338954	-	71337556	71338954	cassetteExon	0.5	100	100	ENSMUST00000188713.7	ENSMUSG00000101374.7	Gm28844	chrY	transcribed_processed_pseudogene	predicted gene 28844
chrY	71338294	71338954	-	71336857	71338954	A3SS	0.25	50	50	ENSMUST00000189142.2	ENSMUSG00000101374.7	Gm28844	chrY	transcribed_processed_pseudogene	predicted gene 28844
chrY	71338469	71338954	-	71336857	71338954	A3SS	0.25	50	50	ENSMUST00000189142.2	ENSMUSG00000101374.7	Gm28844	chrY	transcribed_processed_pseudogene	predicted gene 28844
chrY	71339631	71340934	-	71339084	71340934	A3SS	0.25	50	50	ENSMUST00000189142.2	ENSMUSG00000101374.7	Gm28844	chrY	transcribed_processed_pseudogene	predicted gene 28844
chrY	71419829	71421270	+	71419829;71420742	71420559;71421270	ES	0.5	50	50	ENSMUST00000186549.2	ENSMUSG00000101713.2	Gm28668	chrY	lncRNA	predicted gene 28668
chrY	71419158	71419648	+	71419158	71419644	A3SS	0.5	50	50	ENSMUST00000186549.2	ENSMUSG00000101713.2	Gm28668	chrY	lncRNA	predicted gene 28668
chrY	71642543	71643983	+	71642543;71643456	71643273;71643983	ES	0.5	50	50	ENSMUST00000185300.2	ENSMUSG00000100537.2	Gm28485	chrY	lncRNA	predicted gene 28485
chrY	71641872	71642362	+	71641872	71642358	A3SS	0.5	50	50	ENSMUST00000185300.2	ENSMUSG00000100537.2	Gm28485	chrY	lncRNA	predicted gene 28485
chrY	72072705;72078566	72078383;72081946	-	72072705	72081946	cassetteExon	0.5	100	100	ENSMUST00000190450.7	ENSMUSG00000101444.7	Gm29179	chrY	transcribed_unprocessed_pseudogene	predicted gene 29179
chrY	72079479	72081946	-	72072705	72081946	A3SS	0.2	50	50	ENSMUST00000190450.7	ENSMUSG00000101444.7	Gm29179	chrY	transcribed_unprocessed_pseudogene	predicted gene 29179
chrY	72080094	72081946	-	72072705	72081946	A3SS	0.2	50	50	ENSMUST00000190450.7	ENSMUSG00000101444.7	Gm29179	chrY	transcribed_unprocessed_pseudogene	predicted gene 29179
chrY	72080641	72081946	-	72072705	72081946	A3SS	0.2	50	50	ENSMUST00000190450.7	ENSMUSG00000101444.7	Gm29179	chrY	transcribed_unprocessed_pseudogene	predicted gene 29179
chrY	72078566	72079964	-	72078566;72079479	72079262;72079964	ES	0.25	50	50	ENSMUST00000190621.7	ENSMUSG00000101444.7	Gm29179	chrY	transcribed_unprocessed_pseudogene	predicted gene 29179
chrY	72079479	72081946	-	72079479;72080094	72079964;72081946	ES	0.2	50	50	ENSMUST00000190621.7	ENSMUSG00000101444.7	Gm29179	chrY	transcribed_unprocessed_pseudogene	predicted gene 29179
chrY	72078566;72080641	72080405;72081946	-	72078566;72080094	72079262;72081946	MXE	0.5	100	100	ENSMUST00000190621.7	ENSMUSG00000101444.7	Gm29179	chrY	transcribed_unprocessed_pseudogene	predicted gene 29179
chrY	72077867	72078383	-	72072705	72078383	A3SS	0.5	50	50	ENSMUST00000190621.7	ENSMUSG00000101444.7	Gm29179	chrY	transcribed_unprocessed_pseudogene	predicted gene 29179
chrY	72077867	72079964	-	72079479	72079964	A3SS&ES	0.25	50	50	ENSMUST00000190621.7	ENSMUSG00000101444.7	Gm29179	chrY	transcribed_unprocessed_pseudogene	predicted gene 29179
chrY	72079304	72079964	-	72079479	72079964	A3SS	0.25	50	50	ENSMUST00000190621.7	ENSMUSG00000101444.7	Gm29179	chrY	transcribed_unprocessed_pseudogene	predicted gene 29179
chrY	72078566;72079479	72079262;72081946	-	72078566	72081946	cassetteExon	0.5	100	100	ENSMUST00000190860.7	ENSMUSG00000101444.7	Gm29179	chrY	transcribed_unprocessed_pseudogene	predicted gene 29179
chrY	72077867;72080094	72079964;72081946	-	72077867;72078566	72078383;72081946	MXE	0.5	100	100	ENSMUST00000190860.7	ENSMUSG00000101444.7	Gm29179	chrY	transcribed_unprocessed_pseudogene	predicted gene 29179
chrY	72078566;72080094	72079964;72081946	-	72078566	72081946	cassetteExon	0.5	100	100	ENSMUST00000190860.7	ENSMUSG00000101444.7	Gm29179	chrY	transcribed_unprocessed_pseudogene	predicted gene 29179
chrY	72078566;72080641	72080405;72081946	-	72078566	72081946	cassetteExon	0.5	100	100	ENSMUST00000190860.7	ENSMUSG00000101444.7	Gm29179	chrY	transcribed_unprocessed_pseudogene	predicted gene 29179
chrY	72077867	72079964	-	72077867;72078566	72078383;72079964	ES	0.25	50	50	ENSMUST00000188219.7	ENSMUSG00000101444.7	Gm29179	chrY	transcribed_unprocessed_pseudogene	predicted gene 29179
chrY	72078566	72080405	-	72078566	72079964	5pMXE	0.25	50	50	ENSMUST00000188219.7	ENSMUSG00000101444.7	Gm29179	chrY	transcribed_unprocessed_pseudogene	predicted gene 29179
chrY	72078566	72081946	-	72078566	72079964	5pMXE	0.25	50	50	ENSMUST00000188219.7	ENSMUSG00000101444.7	Gm29179	chrY	transcribed_unprocessed_pseudogene	predicted gene 29179
chrY	72078566;72079304	72079262;72079964	-	72078566	72079964	cassetteExon	0.5	100	100	ENSMUST00000188219.7	ENSMUSG00000101444.7	Gm29179	chrY	transcribed_unprocessed_pseudogene	predicted gene 29179
chrY	72079304	72079964	-	72077867	72079964	A3SS	0.25	50	50	ENSMUST00000188268.2	ENSMUSG00000101444.7	Gm29179	chrY	transcribed_unprocessed_pseudogene	predicted gene 29179
chrY	72079479	72081946	-	72080094	72081946	A3SS&ES	0.25	50	50	ENSMUST00000188268.2	ENSMUSG00000101444.7	Gm29179	chrY	transcribed_unprocessed_pseudogene	predicted gene 29179
chrY	72080641	72081946	-	72080094	72081946	A3SS	0.25	50	50	ENSMUST00000188268.2	ENSMUSG00000101444.7	Gm29179	chrY	transcribed_unprocessed_pseudogene	predicted gene 29179
chrY	72078566;72079479	72079262;72081946	-	72078566;72080641	72080405;72081946	MXE	0.5	100	100	ENSMUST00000188668.2	ENSMUSG00000101444.7	Gm29179	chrY	transcribed_unprocessed_pseudogene	predicted gene 29179
chrY	72077867;72080094	72079964;72081946	-	72077867;72080641	72078383;72081946	MXE	0.5	100	100	ENSMUST00000188668.2	ENSMUSG00000101444.7	Gm29179	chrY	transcribed_unprocessed_pseudogene	predicted gene 29179
chrY	72078566;72080094	72079964;72081946	-	72078566;72080641	72080405;72081946	MXE	0.5	100	100	ENSMUST00000188668.2	ENSMUSG00000101444.7	Gm29179	chrY	transcribed_unprocessed_pseudogene	predicted gene 29179
chrY	72078566;72080094	72079964;72081946	-	72078566;72079479	72079262;72081946	MXE	0.5	100	100	ENSMUST00000185781.2	ENSMUSG00000101444.7	Gm29179	chrY	transcribed_unprocessed_pseudogene	predicted gene 29179
chrY	72243720	72250747	-	72235858	72250747	A3SS	0.5	50	50	ENSMUST00000178505.2	ENSMUSG00000096902.8	Gm20843	chrY	protein_coding	predicted gene, 20843
chrY	72235858	72243037	-	72235858	72250747	A5SS	0.5	50	50	ENSMUST00000178505.2	ENSMUSG00000096902.8	Gm20843	chrY	protein_coding	predicted gene, 20843
chrY	72284505	72285945	+	72284505;72285418	72285235;72285945	ES	0.5	50	50	ENSMUST00000191008.2	ENSMUSG00000100694.2	Gm29182	chrY	lncRNA	predicted gene 29182
chrY	72283834	72284324	+	72283834	72284320	A3SS	0.5	50	50	ENSMUST00000191008.2	ENSMUSG00000100694.2	Gm29182	chrY	lncRNA	predicted gene 29182
chrY	72417171;72423029	72422846;72426408	-	72417171	72426408	cassetteExon	0.5	100	100	ENSMUST00000188496.7	ENSMUSG00000100898.7	Gm29178	chrY	transcribed_unprocessed_pseudogene	predicted gene 29178
chrY	72423942	72426408	-	72417171	72426408	A3SS	0.2	50	50	ENSMUST00000188496.7	ENSMUSG00000100898.7	Gm29178	chrY	transcribed_unprocessed_pseudogene	predicted gene 29178
chrY	72424557	72426408	-	72417171	72426408	A3SS	0.2	50	50	ENSMUST00000188496.7	ENSMUSG00000100898.7	Gm29178	chrY	transcribed_unprocessed_pseudogene	predicted gene 29178
chrY	72425104	72426408	-	72417171	72426408	A3SS	0.2	50	50	ENSMUST00000188496.7	ENSMUSG00000100898.7	Gm29178	chrY	transcribed_unprocessed_pseudogene	predicted gene 29178
chrY	72423029	72424427	-	72423029;72423942	72423725;72424427	ES	0.25	50	50	ENSMUST00000186312.7	ENSMUSG00000100898.7	Gm29178	chrY	transcribed_unprocessed_pseudogene	predicted gene 29178
chrY	72423942	72426408	-	72423942;72424557	72424427;72426408	ES	0.2	50	50	ENSMUST00000186312.7	ENSMUSG00000100898.7	Gm29178	chrY	transcribed_unprocessed_pseudogene	predicted gene 29178
chrY	72423029;72425104	72424868;72426408	-	72423029;72424557	72423725;72426408	MXE	0.5	100	100	ENSMUST00000186312.7	ENSMUSG00000100898.7	Gm29178	chrY	transcribed_unprocessed_pseudogene	predicted gene 29178
chrY	72422330	72422846	-	72417171	72422846	A3SS	0.5	50	50	ENSMUST00000186312.7	ENSMUSG00000100898.7	Gm29178	chrY	transcribed_unprocessed_pseudogene	predicted gene 29178
chrY	72422330	72424427	-	72423942	72424427	A3SS&ES	0.25	50	50	ENSMUST00000186312.7	ENSMUSG00000100898.7	Gm29178	chrY	transcribed_unprocessed_pseudogene	predicted gene 29178
chrY	72423767	72424427	-	72423942	72424427	A3SS	0.25	50	50	ENSMUST00000186312.7	ENSMUSG00000100898.7	Gm29178	chrY	transcribed_unprocessed_pseudogene	predicted gene 29178
chrY	72423029;72423942	72423725;72426408	-	72423029	72426408	cassetteExon	0.5	100	100	ENSMUST00000189271.7	ENSMUSG00000100898.7	Gm29178	chrY	transcribed_unprocessed_pseudogene	predicted gene 29178
chrY	72422330;72424557	72424427;72426408	-	72422330;72423029	72422846;72426408	MXE	0.5	100	100	ENSMUST00000189271.7	ENSMUSG00000100898.7	Gm29178	chrY	transcribed_unprocessed_pseudogene	predicted gene 29178
chrY	72423029;72424557	72424427;72426408	-	72423029	72426408	cassetteExon	0.5	100	100	ENSMUST00000189271.7	ENSMUSG00000100898.7	Gm29178	chrY	transcribed_unprocessed_pseudogene	predicted gene 29178
chrY	72423029;72425104	72424868;72426408	-	72423029	72426408	cassetteExon	0.5	100	100	ENSMUST00000189271.7	ENSMUSG00000100898.7	Gm29178	chrY	transcribed_unprocessed_pseudogene	predicted gene 29178
chrY	72423029;72423942	72423725;72426408	-	72423029;72425104	72424868;72426408	MXE	0.5	100	100	ENSMUST00000190636.7	ENSMUSG00000100898.7	Gm29178	chrY	transcribed_unprocessed_pseudogene	predicted gene 29178
chrY	72422330;72424557	72424427;72426408	-	72422330;72425104	72422846;72426408	MXE	0.5	100	100	ENSMUST00000190636.7	ENSMUSG00000100898.7	Gm29178	chrY	transcribed_unprocessed_pseudogene	predicted gene 29178
chrY	72423029;72424557	72424427;72426408	-	72423029;72425104	72424868;72426408	MXE	0.5	100	100	ENSMUST00000190636.7	ENSMUSG00000100898.7	Gm29178	chrY	transcribed_unprocessed_pseudogene	predicted gene 29178
chrY	72422330;72423029	72422846;72424427	-	72422330	72424427	cassetteExon	0.5	100	100	ENSMUST00000185816.7	ENSMUSG00000100898.7	Gm29178	chrY	transcribed_unprocessed_pseudogene	predicted gene 29178
chrY	72423767	72424427	-	72422330	72424427	A3SS	0.25	50	50	ENSMUST00000185816.7	ENSMUSG00000100898.7	Gm29178	chrY	transcribed_unprocessed_pseudogene	predicted gene 29178
chrY	72423029	72424868	-	72423029	72424427	5pMXE	0.25	50	50	ENSMUST00000187819.7	ENSMUSG00000100898.7	Gm29178	chrY	transcribed_unprocessed_pseudogene	predicted gene 29178
chrY	72423029	72426408	-	72423029	72424427	5pMXE	0.25	50	50	ENSMUST00000187819.7	ENSMUSG00000100898.7	Gm29178	chrY	transcribed_unprocessed_pseudogene	predicted gene 29178
chrY	72423029;72423767	72423725;72424427	-	72423029	72424427	cassetteExon	0.5	100	100	ENSMUST00000187819.7	ENSMUSG00000100898.7	Gm29178	chrY	transcribed_unprocessed_pseudogene	predicted gene 29178
chrY	72423029;72424557	72424427;72426408	-	72423029;72423942	72423725;72426408	MXE	0.5	100	100	ENSMUST00000187750.2	ENSMUSG00000100898.7	Gm29178	chrY	transcribed_unprocessed_pseudogene	predicted gene 29178
chrY	73001723;73007565	73007382;73010948	-	73001723	73010948	cassetteExon	0.5	100	100	ENSMUST00000186554.7	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73006866	73010948	-	73001723	73010948	A3SS	0.16	50	50	ENSMUST00000186554.7	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73008477	73010948	-	73001723	73010948	A3SS	0.16	50	50	ENSMUST00000186554.7	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73009092	73010948	-	73001723	73010948	A3SS	0.16	50	50	ENSMUST00000186554.7	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73009639	73010948	-	73001723	73010948	A3SS	0.16	50	50	ENSMUST00000186554.7	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73007565	73008962	-	73007565;73008477	73008260;73008962	ES	0.25	50	50	ENSMUST00000186757.7	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73008477	73010948	-	73008477;73009092	73008962;73010948	ES	0.16	50	50	ENSMUST00000186757.7	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73007565;73009639	73009403;73010948	-	73007565;73009092	73008260;73010948	MXE	0.5	100	100	ENSMUST00000186757.7	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73006866	73007382	-	73001723	73007382	A3SS	0.5	50	50	ENSMUST00000186757.7	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73006866	73008962	-	73008477	73008962	A3SS&ES	0.25	50	50	ENSMUST00000186757.7	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73006866	73010948	-	73009092	73010948	A3SS&ES	0.16	50	50	ENSMUST00000186757.7	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73008302	73008962	-	73008477	73008962	A3SS	0.25	50	50	ENSMUST00000186757.7	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73006866	73010948	-	73006866;73007565	73007382;73010948	ES	0.2	50	50	ENSMUST00000186094.7	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73007565;73008477	73008260;73010948	-	73007565	73010948	cassetteExon	0.5	100	100	ENSMUST00000186094.7	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73006866;73009092	73008962;73010948	-	73006866;73007565	73007382;73010948	MXE	0.5	100	100	ENSMUST00000186094.7	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73007565;73009092	73008962;73010948	-	73007565	73010948	cassetteExon	0.5	100	100	ENSMUST00000186094.7	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73007565;73009639	73009403;73010948	-	73007565	73010948	cassetteExon	0.5	100	100	ENSMUST00000186094.7	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73006866	73008962	-	73006866;73007565	73007382;73008962	ES	0.25	50	50	ENSMUST00000188989.7	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73007565	73009403	-	73007565	73008962	5pMXE	0.25	50	50	ENSMUST00000188989.7	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73007565	73010948	-	73007565	73008962	5pMXE	0.25	50	50	ENSMUST00000188989.7	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73007565;73008302	73008260;73008962	-	73007565	73008962	cassetteExon	0.5	100	100	ENSMUST00000188989.7	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73006866	73010948	-	73006866;73009092	73008962;73010948	ES	0.2	50	50	ENSMUST00000190302.7	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73008302	73008962	-	73006866	73008962	A3SS	0.25	50	50	ENSMUST00000190302.7	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73008477	73010948	-	73009092	73010948	A3SS&ES	0.2	50	50	ENSMUST00000190302.7	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73009639	73010948	-	73009092	73010948	A3SS	0.2	50	50	ENSMUST00000190302.7	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73008477	73010948	-	73006866	73010948	A3SS	0.16	50	50	ENSMUST00000190952.7	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73009639	73010948	-	73006866	73010948	A3SS	0.16	50	50	ENSMUST00000190952.7	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73007565;73008477	73008260;73010948	-	73007565;73009639	73009403;73010948	MXE	0.5	100	100	ENSMUST00000185228.2	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73006866;73009092	73008962;73010948	-	73006866;73009639	73007382;73010948	MXE	0.5	100	100	ENSMUST00000185228.2	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73007565;73009092	73008962;73010948	-	73007565;73009639	73009403;73010948	MXE	0.5	100	100	ENSMUST00000185228.2	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73007565;73009092	73008962;73010948	-	73007565;73008477	73008260;73010948	MXE	0.5	100	100	ENSMUST00000190200.2	ENSMUSG00000102129.7	Gm28969	chrY	transcribed_unprocessed_pseudogene	predicted gene 28969
chrY	73350479;73356376	73356193;73359776	-	73350479	73359776	cassetteExon	0.5	100	100	ENSMUST00000187144.7	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73355677	73359776	-	73350479	73359776	A3SS	0.16	50	50	ENSMUST00000187144.7	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73357288	73359776	-	73350479	73359776	A3SS	0.16	50	50	ENSMUST00000187144.7	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73357903	73359776	-	73350479	73359776	A3SS	0.16	50	50	ENSMUST00000187144.7	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73358450	73359776	-	73350479	73359776	A3SS	0.16	50	50	ENSMUST00000187144.7	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73356376	73357773	-	73356376;73357288	73357071;73357773	ES	0.25	50	50	ENSMUST00000190010.7	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73357288	73359776	-	73357288;73357903	73357773;73359776	ES	0.16	50	50	ENSMUST00000190010.7	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73356376;73358450	73358214;73359776	-	73356376;73357903	73357071;73359776	MXE	0.5	100	100	ENSMUST00000190010.7	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73355677	73356193	-	73350479	73356193	A3SS	0.5	50	50	ENSMUST00000190010.7	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73355677	73357773	-	73357288	73357773	A3SS&ES	0.25	50	50	ENSMUST00000190010.7	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73355677	73359776	-	73357903	73359776	A3SS&ES	0.16	50	50	ENSMUST00000190010.7	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73357113	73357773	-	73357288	73357773	A3SS	0.25	50	50	ENSMUST00000190010.7	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73355677	73359776	-	73355677;73356376	73356193;73359776	ES	0.2	50	50	ENSMUST00000187895.7	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73356376;73357288	73357071;73359776	-	73356376	73359776	cassetteExon	0.5	100	100	ENSMUST00000187895.7	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73355677;73357903	73357773;73359776	-	73355677;73356376	73356193;73359776	MXE	0.5	100	100	ENSMUST00000187895.7	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73356376;73357903	73357773;73359776	-	73356376	73359776	cassetteExon	0.5	100	100	ENSMUST00000187895.7	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73356376;73358450	73358214;73359776	-	73356376	73359776	cassetteExon	0.5	100	100	ENSMUST00000187895.7	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73355677	73359776	-	73355677;73357903	73357773;73359776	ES	0.2	50	50	ENSMUST00000190939.7	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73355677;73356376	73356193;73357773	-	73355677	73357773	cassetteExon	0.5	100	100	ENSMUST00000190939.7	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73357113	73357773	-	73355677	73357773	A3SS	0.25	50	50	ENSMUST00000190939.7	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73357288	73359776	-	73357903	73359776	A3SS&ES	0.2	50	50	ENSMUST00000190939.7	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73358450	73359776	-	73357903	73359776	A3SS	0.2	50	50	ENSMUST00000190939.7	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73356376	73358214	-	73356376	73357773	5pMXE	0.25	50	50	ENSMUST00000188199.7	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73356376	73359776	-	73356376	73357773	5pMXE	0.25	50	50	ENSMUST00000188199.7	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73356376;73357113	73357071;73357773	-	73356376	73357773	cassetteExon	0.5	100	100	ENSMUST00000188199.7	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73357288	73359776	-	73355677	73359776	A3SS	0.16	50	50	ENSMUST00000191323.7	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73358450	73359776	-	73355677	73359776	A3SS	0.16	50	50	ENSMUST00000191323.7	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73356376;73357288	73357071;73359776	-	73356376;73358450	73358214;73359776	MXE	0.5	100	100	ENSMUST00000188067.2	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73355677;73357903	73357773;73359776	-	73355677;73358450	73356193;73359776	MXE	0.5	100	100	ENSMUST00000188067.2	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73356376;73357903	73357773;73359776	-	73356376;73358450	73358214;73359776	MXE	0.5	100	100	ENSMUST00000188067.2	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73350479	73359776	-	73356376	73359776	3pMXE	0.16	50	50	ENSMUST00000185199.2	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73355677	73359776	-	73356376	73359776	3pMXE	0.16	50	50	ENSMUST00000185199.2	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73356376;73357903	73357773;73359776	-	73356376;73357288	73357071;73359776	MXE	0.5	100	100	ENSMUST00000187958.2	ENSMUSG00000100379.7	Gm28677	chrY	transcribed_unprocessed_pseudogene	predicted gene 28677
chrY	73437893	73439334	+	73437893;73438806	73438623;73439334	ES	0.5	50	50	ENSMUST00000185248.2	ENSMUSG00000101425.2	Gm29255	chrY	lncRNA	predicted gene 29255
chrY	73437222	73437712	+	73437222	73437708	A3SS	0.5	50	50	ENSMUST00000185248.2	ENSMUSG00000101425.2	Gm29255	chrY	lncRNA	predicted gene 29255
chrY	73838736	73840176	+	73838736;73839649	73839466;73840176	ES	0.5	50	50	ENSMUST00000190319.2	ENSMUSG00000099554.2	Gm28259	chrY	lncRNA	predicted gene 28259
chrY	73838065	73838555	+	73838065	73838551	A3SS	0.5	50	50	ENSMUST00000190319.2	ENSMUSG00000099554.2	Gm28259	chrY	lncRNA	predicted gene 28259
chrY	74051201	74052599	-	74051201;74052114	74051897;74052599	ES	0.25	50	50	ENSMUST00000187759.7	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74052114	74054598	-	74052114;74052728	74052599;74054598	ES	0.16	50	50	ENSMUST00000187759.7	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74051201;74053275	74053039;74054598	-	74051201;74052728	74051897;74054598	MXE	0.5	100	100	ENSMUST00000187759.7	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74050502	74051018	-	74045326	74051018	A3SS	0.5	50	50	ENSMUST00000187759.7	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74050502	74052599	-	74052114	74052599	A3SS&ES	0.25	50	50	ENSMUST00000187759.7	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74050502	74054598	-	74052728	74054598	A3SS&ES	0.16	50	50	ENSMUST00000187759.7	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74051939	74052599	-	74052114	74052599	A3SS	0.25	50	50	ENSMUST00000187759.7	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74045326;74051201	74051018;74054598	-	74045326	74054598	cassetteExon	0.5	100	100	ENSMUST00000186558.2	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74050502	74054598	-	74045326	74054598	A3SS	0.16	50	50	ENSMUST00000186558.2	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74052114	74054598	-	74045326	74054598	A3SS	0.16	50	50	ENSMUST00000186558.2	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74052728	74054598	-	74045326	74054598	A3SS	0.16	50	50	ENSMUST00000186558.2	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74053275	74054598	-	74045326	74054598	A3SS	0.16	50	50	ENSMUST00000186558.2	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74050502	74052599	-	74050502	74051018	5pMXE	0.33	50	50	ENSMUST00000186664.2	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74050502	74054598	-	74050502	74051018	5pMXE	0.33	50	50	ENSMUST00000186664.2	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74050502	74054598	-	74050502;74051201	74051018;74054598	ES	0.2	50	50	ENSMUST00000191477.7	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74051201;74052114	74051897;74054598	-	74051201	74054598	cassetteExon	0.5	100	100	ENSMUST00000191477.7	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74050502;74052728	74052599;74054598	-	74050502;74051201	74051018;74054598	MXE	0.5	100	100	ENSMUST00000191477.7	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74051201;74052728	74052599;74054598	-	74051201	74054598	cassetteExon	0.5	100	100	ENSMUST00000191477.7	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74051201;74053275	74053039;74054598	-	74051201	74054598	cassetteExon	0.5	100	100	ENSMUST00000191477.7	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74050502;74052728	74052599;74054598	-	74050502	74054598	cassetteExon	0.5	100	100	ENSMUST00000186926.7	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74052114	74054598	-	74050502	74054598	A3SS	0.16	50	50	ENSMUST00000186926.7	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74053275	74054598	-	74050502	74054598	A3SS	0.16	50	50	ENSMUST00000186926.7	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74051201;74052114	74051897;74054598	-	74051201;74053275	74053039;74054598	MXE	0.5	100	100	ENSMUST00000185868.7	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74050502;74052728	74052599;74054598	-	74050502;74053275	74051018;74054598	MXE	0.5	100	100	ENSMUST00000185868.7	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74051201;74052728	74052599;74054598	-	74051201;74053275	74053039;74054598	MXE	0.5	100	100	ENSMUST00000185868.7	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74050502	74052599	-	74050502;74051201	74051018;74052599	ES	0.25	50	50	ENSMUST00000189305.7	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74051201	74053039	-	74051201	74052599	5pMXE	0.25	50	50	ENSMUST00000189305.7	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74051201	74054598	-	74051201	74052599	5pMXE	0.25	50	50	ENSMUST00000189305.7	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74051201;74051939	74051897;74052599	-	74051201	74052599	cassetteExon	0.5	100	100	ENSMUST00000189305.7	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74051939	74052599	-	74050502	74052599	A3SS	0.25	50	50	ENSMUST00000191244.2	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74052114	74054598	-	74052728	74054598	A3SS&ES	0.2	50	50	ENSMUST00000191244.2	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74053275	74054598	-	74052728	74054598	A3SS	0.2	50	50	ENSMUST00000191244.2	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74051201;74052728	74052599;74054598	-	74051201;74052114	74051897;74054598	MXE	0.5	100	100	ENSMUST00000190513.2	ENSMUSG00000099685.7	Gm29617	chrY	transcribed_unprocessed_pseudogene	predicted gene 29617
chrY	74130460	74130950	+	74130460	74130946	A3SS	0.5	50	50	ENSMUST00000188777.7	ENSMUSG00000101774.7	Gm29616	chrY	lncRNA	predicted gene 29616
chrY	74420953	74422394	+	74420953;74421866	74421683;74422394	ES	0.5	50	50	ENSMUST00000186020.2	ENSMUSG00000100805.2	Gm29108	chrY	lncRNA	predicted gene 29108
chrY	74420282	74420772	+	74420282	74420768	A3SS	0.5	50	50	ENSMUST00000186020.2	ENSMUSG00000100805.2	Gm29108	chrY	lncRNA	predicted gene 29108
chrY	74812468	74813908	+	74812468;74813381	74813198;74813908	ES	0.5	50	50	ENSMUST00000191328.2	ENSMUSG00000101218.2	Gm29416	chrY	lncRNA	predicted gene 29416
chrY	74811807	74812287	+	74811807	74812283	A3SS	0.5	50	50	ENSMUST00000191328.2	ENSMUSG00000101218.2	Gm29416	chrY	lncRNA	predicted gene 29416
chrY	75146313	75147754	+	75146313;75147226	75147043;75147754	ES	0.5	50	50	ENSMUST00000190429.2	ENSMUSG00000100140.2	Gm28789	chrY	lncRNA	predicted gene 28789
chrY	75145642	75146132	+	75145642	75146128	A3SS	0.5	50	50	ENSMUST00000190429.2	ENSMUSG00000100140.2	Gm28789	chrY	lncRNA	predicted gene 28789
chrY	75368919	75370359	+	75368919;75369832	75369649;75370359	ES	0.5	50	50	ENSMUST00000189701.2	ENSMUSG00000099896.2	Gm29278	chrY	lncRNA	predicted gene 29278
chrY	75368248	75368738	+	75368248	75368734	A3SS	0.5	50	50	ENSMUST00000189701.2	ENSMUSG00000099896.2	Gm29278	chrY	lncRNA	predicted gene 29278
chrY	75665805	75667246	+	75665805;75666718	75666535;75667246	ES	0.5	50	50	ENSMUST00000188938.2	ENSMUSG00000100544.2	Gm28606	chrY	lncRNA	predicted gene 28606
chrY	75665134	75665624	+	75665134	75665620	A3SS	0.5	50	50	ENSMUST00000188938.2	ENSMUSG00000100544.2	Gm28606	chrY	lncRNA	predicted gene 28606
chrY	76935918	76937358	+	76935918;76936831	76936648;76937358	ES	0.5	50	50	ENSMUST00000187866.2	ENSMUSG00000099526.2	Gm29313	chrY	lncRNA	predicted gene 29313
chrY	76935247	76935737	+	76935247	76935733	A3SS	0.5	50	50	ENSMUST00000187866.2	ENSMUSG00000099526.2	Gm29313	chrY	lncRNA	predicted gene 29313
chrY	77269373	77270813	+	77269373;77270286	77270103;77270813	ES	0.5	50	50	ENSMUST00000189721.2	ENSMUSG00000101960.2	Gm29311	chrY	lncRNA	predicted gene 29311
chrY	77656255	77657695	+	77656255;77657168	77656985;77657695	ES	0.5	50	50	ENSMUST00000189573.2	ENSMUSG00000099416.2	Gm28540	chrY	lncRNA	predicted gene 28540
chrY	77655584	77656074	+	77655584	77656070	A3SS	0.5	50	50	ENSMUST00000189573.2	ENSMUSG00000099416.2	Gm28540	chrY	lncRNA	predicted gene 28540
chrY	77711714	77718740	+	77711714	77726616	A3SS	0.5	50	50	ENSMUST00000179073.2	ENSMUSG00000094647.8	Gm21650	chrY	protein_coding	predicted gene, 21650
chrY	77719423	77726616	+	77711714	77726616	A5SS	0.5	50	50	ENSMUST00000179073.2	ENSMUSG00000094647.8	Gm21650	chrY	protein_coding	predicted gene, 21650
chrY	77866673	77868113	+	77866673;77867586	77867403;77868113	ES	0.5	50	50	ENSMUST00000187955.2	ENSMUSG00000100722.2	Gm29569	chrY	lncRNA	predicted gene 29569
chrY	77866002	77866492	+	77866002	77866488	A3SS	0.5	50	50	ENSMUST00000187955.2	ENSMUSG00000100722.2	Gm29569	chrY	lncRNA	predicted gene 29569
chrY	78163431	78164872	+	78163431;78164344	78164161;78164872	ES	0.5	50	50	ENSMUST00000186260.2	ENSMUSG00000101060.2	Gm29565	chrY	lncRNA	predicted gene 29565
chrY	78162760	78163250	+	78162760	78163246	A3SS	0.5	50	50	ENSMUST00000186260.2	ENSMUSG00000101060.2	Gm29565	chrY	lncRNA	predicted gene 29565
chrY	78373206	78374646	+	78373206;78374119	78373936;78374646	ES	0.5	50	50	ENSMUST00000186567.2	ENSMUSG00000100849.2	Gm28663	chrY	lncRNA	predicted gene 28663
chrY	78372535	78373025	+	78372535	78373021	A3SS	0.5	50	50	ENSMUST00000186567.2	ENSMUSG00000100849.2	Gm28663	chrY	lncRNA	predicted gene 28663
chrY	78663394	78664834	+	78663394;78664307	78664124;78664834	ES	0.5	50	50	ENSMUST00000189686.7	ENSMUSG00000100328.7	Gm28816	chrY	lncRNA	predicted gene 28816
chrY	78940373	78941814	+	78940373;78941286	78941103;78941814	ES	0.5	50	50	ENSMUST00000186293.2	ENSMUSG00000101804.2	Gm28813	chrY	lncRNA	predicted gene 28813
chrY	78939702	78940192	+	78939702	78940188	A3SS	0.5	50	50	ENSMUST00000186293.2	ENSMUSG00000101804.2	Gm28813	chrY	lncRNA	predicted gene 28813
chrY	79270073	79271526	+	79270073;79270986	79270803;79271526	ES	0.5	50	50	ENSMUST00000186112.2	ENSMUSG00000099636.2	Gm28422	chrY	lncRNA	predicted gene 28422
chrY	79269402	79269892	+	79269402	79269888	A3SS	0.5	50	50	ENSMUST00000186112.2	ENSMUSG00000099636.2	Gm28422	chrY	lncRNA	predicted gene 28422
chrY	79785585	79787026	+	79785585;79786499	79786316;79787026	ES	0.5	50	50	ENSMUST00000188564.7	ENSMUSG00000102016.7	Gm29606	chrY	lncRNA	predicted gene 29606
chrY	80084421	80085862	+	80084421;80085334	80085151;80085862	ES	0.5	50	50	ENSMUST00000188255.2	ENSMUSG00000101465.2	Gm29190	chrY	lncRNA	predicted gene 29190
chrY	80083750	80084240	+	80083750	80084236	A3SS	0.5	50	50	ENSMUST00000188255.2	ENSMUSG00000101465.2	Gm29190	chrY	lncRNA	predicted gene 29190
chrY	81408478	81409919	+	81408478;81409392	81409209;81409919	ES	0.5	50	50	ENSMUST00000188242.2	ENSMUSG00000100187.2	Gm29324	chrY	lncRNA	predicted gene 29324
chrY	81407807	81408297	+	81407807	81408293	A3SS	0.5	50	50	ENSMUST00000188242.2	ENSMUSG00000100187.2	Gm29324	chrY	lncRNA	predicted gene 29324
chrY	81631550	81632990	+	81631550;81632463	81632280;81632990	ES	0.5	50	50	ENSMUST00000189417.2	ENSMUSG00000101962.2	Gm28741	chrY	lncRNA	predicted gene 28741
chrY	81630879	81631369	+	81630879	81631365	A3SS	0.5	50	50	ENSMUST00000189417.2	ENSMUSG00000101962.2	Gm28741	chrY	lncRNA	predicted gene 28741
chrY	81923268	81924709	+	81923268;81924181	81923998;81924709	ES	0.5	50	50	ENSMUST00000191099.2	ENSMUSG00000099480.2	Gm28124	chrY	lncRNA	predicted gene 28124
chrY	81922597	81923087	+	81922597	81923083	A3SS	0.5	50	50	ENSMUST00000191099.2	ENSMUSG00000099480.2	Gm28124	chrY	lncRNA	predicted gene 28124
chrY	82394766	82396206	+	82394766;82395679	82395496;82396206	ES	0.5	50	50	ENSMUST00000185588.2	ENSMUSG00000100035.2	Gm29473	chrY	lncRNA	predicted gene 29473
chrY	82394095	82394585	+	82394095	82394581	A3SS	0.5	50	50	ENSMUST00000185588.2	ENSMUSG00000100035.2	Gm29473	chrY	lncRNA	predicted gene 29473
chrY	82688306	82689747	+	82688306;82689219	82689036;82689747	ES	0.5	50	50	ENSMUST00000187730.2	ENSMUSG00000100532.2	Gm28225	chrY	lncRNA	predicted gene 28225
chrY	82687635	82688125	+	82687635	82688121	A3SS	0.5	50	50	ENSMUST00000187730.2	ENSMUSG00000100532.2	Gm28225	chrY	lncRNA	predicted gene 28225
chrY	83204305	83205745	+	83204305;83205218	83205035;83205745	ES	0.5	50	50	ENSMUST00000188603.2	ENSMUSG00000101508.2	Gm28832	chrY	lncRNA	predicted gene 28832
chrY	83203634	83204124	+	83203634	83204120	A3SS	0.5	50	50	ENSMUST00000188603.2	ENSMUSG00000101508.2	Gm28832	chrY	lncRNA	predicted gene 28832
chrY	84047771	84049212	+	84047771;84048684	84048501;84049212	ES	0.5	50	50	ENSMUST00000190133.2	ENSMUSG00000100407.2	Gm28472	chrY	lncRNA	predicted gene 28472
chrY	84047100	84047590	+	84047100	84047586	A3SS	0.5	50	50	ENSMUST00000190133.2	ENSMUSG00000100407.2	Gm28472	chrY	lncRNA	predicted gene 28472
chrY	84270218	84271658	+	84270218;84271131	84270948;84271658	ES	0.5	50	50	ENSMUST00000187645.2	ENSMUSG00000100531.2	Gm28475	chrY	lncRNA	predicted gene 28475
chrY	84269547	84270037	+	84269547	84270033	A3SS	0.5	50	50	ENSMUST00000187645.2	ENSMUSG00000100531.2	Gm28475	chrY	lncRNA	predicted gene 28475
chrY	84690166	84691607	+	84690166;84691079	84690896;84691607	ES	0.5	50	50	ENSMUST00000189318.2	ENSMUSG00000101160.2	Gm29338	chrY	lncRNA	predicted gene 29338
chrY	84689495	84689985	+	84689495	84689981	A3SS	0.5	50	50	ENSMUST00000189318.2	ENSMUSG00000101160.2	Gm29338	chrY	lncRNA	predicted gene 29338
chrY	84920051	84921491	+	84920051;84920964	84920781;84921491	ES	0.5	50	50	ENSMUST00000185729.2	ENSMUSG00000099633.2	Gm29071	chrY	lncRNA	predicted gene 29071
chrY	84919380	84919870	+	84919380	84919866	A3SS	0.5	50	50	ENSMUST00000185729.2	ENSMUSG00000099633.2	Gm29071	chrY	lncRNA	predicted gene 29071
chrY	85317683	85319123	+	85317683;85318596	85318413;85319123	ES	0.5	50	50	ENSMUST00000187506.2	ENSMUSG00000099921.2	Gm28971	chrY	lncRNA	predicted gene 28971
chrY	85317012	85317502	+	85317012	85317498	A3SS	0.5	50	50	ENSMUST00000187506.2	ENSMUSG00000099921.2	Gm28971	chrY	lncRNA	predicted gene 28971
chrY	85678167	85679607	+	85678167;85679080	85678897;85679607	ES	0.5	50	50	ENSMUST00000188694.2	ENSMUSG00000101282.2	Gm28152	chrY	lncRNA	predicted gene 28152
chrY	85677496	85677986	+	85677496	85677982	A3SS	0.5	50	50	ENSMUST00000188694.2	ENSMUSG00000101282.2	Gm28152	chrY	lncRNA	predicted gene 28152
chrY	86012339	86013780	+	86012339;86013253	86013070;86013780	ES	0.5	50	50	ENSMUST00000189607.2	ENSMUSG00000101961.2	Gm28220	chrY	lncRNA	predicted gene 28220
chrY	86011668	86012158	+	86011668	86012154	A3SS	0.5	50	50	ENSMUST00000189607.2	ENSMUSG00000101961.2	Gm28220	chrY	lncRNA	predicted gene 28220
chrY	86231921	86233361	+	86231921;86232834	86232651;86233361	ES	0.5	50	50	ENSMUST00000186782.2	ENSMUSG00000099824.2	Gm28218	chrY	lncRNA	predicted gene 28218
chrY	86231250	86231740	+	86231250	86231736	A3SS	0.5	50	50	ENSMUST00000186782.2	ENSMUSG00000099824.2	Gm28218	chrY	lncRNA	predicted gene 28218
chrY	86552785	86554225	+	86552785;86553697	86553514;86554225	ES	0.5	50	50	ENSMUST00000186328.2	ENSMUSG00000102110.2	Gm28440	chrY	lncRNA	predicted gene 28440
chrY	86552114	86552604	+	86552114	86552600	A3SS	0.5	50	50	ENSMUST00000186328.2	ENSMUSG00000102110.2	Gm28440	chrY	lncRNA	predicted gene 28440
chrY	86778641	86780080	+	86778641;86779553	86779370;86780080	ES	0.5	50	50	ENSMUST00000188186.2	ENSMUSG00000100887.2	Gm29297	chrY	lncRNA	predicted gene 29297
chrY	86777970	86778460	+	86777970	86778456	A3SS	0.5	50	50	ENSMUST00000188186.2	ENSMUSG00000100887.2	Gm29297	chrY	lncRNA	predicted gene 29297
chrY	87067295	87068735	+	87067295;87068208	87068025;87068735	ES	0.5	50	50	ENSMUST00000189584.2	ENSMUSG00000099496.2	Gm28365	chrY	lncRNA	predicted gene 28365
chrY	87066624	87067114	+	87066624	87067110	A3SS	0.5	50	50	ENSMUST00000189584.2	ENSMUSG00000099496.2	Gm28365	chrY	lncRNA	predicted gene 28365
chrY	87289713	87291153	+	87289713;87290626	87290443;87291153	ES	0.5	50	50	ENSMUST00000187942.2	ENSMUSG00000100243.2	Gm28367	chrY	lncRNA	predicted gene 28367
chrY	87289042	87289532	+	87289042	87289528	A3SS	0.5	50	50	ENSMUST00000187942.2	ENSMUSG00000100243.2	Gm28367	chrY	lncRNA	predicted gene 28367
chrY	87722543	87723983	+	87722543;87723456	87723273;87723983	ES	0.5	50	50	ENSMUST00000186747.2	ENSMUSG00000101931.2	Gm28108	chrY	lncRNA	predicted gene 28108
chrY	87721872	87722362	+	87721872	87722358	A3SS	0.5	50	50	ENSMUST00000186747.2	ENSMUSG00000101931.2	Gm28108	chrY	lncRNA	predicted gene 28108
chrY	88226883	88228323	+	88226883;88227796	88227613;88228323	ES	0.5	50	50	ENSMUST00000188893.2	ENSMUSG00000099643.2	Gm29162	chrY	lncRNA	predicted gene 29162
chrY	88226212	88226702	+	88226212	88226698	A3SS	0.5	50	50	ENSMUST00000188893.2	ENSMUSG00000099643.2	Gm29162	chrY	lncRNA	predicted gene 29162
chrY	88314663	88316101	+	88314663;88315573	88315390;88316101	ES	0.5	50	50	ENSMUST00000185222.2	ENSMUSG00000100440.2	Gm28405	chrY	lncRNA	predicted gene 28405
chrY	88313992	88314482	+	88313992	88314478	A3SS	0.5	50	50	ENSMUST00000185222.2	ENSMUSG00000100440.2	Gm28405	chrY	lncRNA	predicted gene 28405
chrY	88486365	88487805	+	88486365;88487278	88487095;88487805	ES	0.5	50	50	ENSMUST00000189054.2	ENSMUSG00000101984.2	Gm29436	chrY	lncRNA	predicted gene 29436
chrY	88485694	88486184	+	88485694	88486180	A3SS	0.5	50	50	ENSMUST00000189054.2	ENSMUSG00000101984.2	Gm29436	chrY	lncRNA	predicted gene 29436
chrY	88709042	88710482	+	88709042;88709955	88709772;88710482	ES	0.5	50	50	ENSMUST00000185630.2	ENSMUSG00000100067.2	Gm28407	chrY	lncRNA	predicted gene 28407
chrY	88708371	88708861	+	88708371	88708857	A3SS	0.5	50	50	ENSMUST00000185630.2	ENSMUSG00000100067.2	Gm28407	chrY	lncRNA	predicted gene 28407
chrY	89007029	89008470	+	89007029;89007942	89007759;89008470	ES	0.5	50	50	ENSMUST00000187002.2	ENSMUSG00000101533.2	Gm29393	chrY	lncRNA	predicted gene 29393
chrY	89006358	89006848	+	89006358	89006844	A3SS	0.5	50	50	ENSMUST00000187002.2	ENSMUSG00000101533.2	Gm29393	chrY	lncRNA	predicted gene 29393
chrY	89234645	89236085	+	89234645;89235558	89235375;89236085	ES	0.5	50	50	ENSMUST00000188727.2	ENSMUSG00000100492.2	Gm28672	chrY	lncRNA	predicted gene 28672
chrY	89233974	89234464	+	89233974	89234460	A3SS	0.5	50	50	ENSMUST00000188727.2	ENSMUSG00000100492.2	Gm28672	chrY	lncRNA	predicted gene 28672
chrY	89404104	89405542	+	89404104;89405014	89404831;89405542	ES	0.5	50	50	ENSMUST00000185365.2	ENSMUSG00000099982.2	Gm28670	chrY	lncRNA	predicted gene 28670
chrY	89403435	89403923	+	89403435	89403919	A3SS	0.5	50	50	ENSMUST00000185365.2	ENSMUSG00000099982.2	Gm28670	chrY	lncRNA	predicted gene 28670
chrY	89619416	89620856	-	89619416;89620128	89619945;89620856	ES	0.5	50	50	ENSMUST00000186562.2	ENSMUSG00000101402.2	Gm28673	chrY	lncRNA	predicted gene 28673
chrY	89621037	89621525	-	89621041	89621525	A3SS	0.5	50	50	ENSMUST00000186562.2	ENSMUSG00000101402.2	Gm28673	chrY	lncRNA	predicted gene 28673
chrY	89647964	89649402	-	89647964;89648672	89648492;89649402	ES	0.5	50	50	ENSMUST00000187502.2	ENSMUSG00000100574.2	Gm28674	chrY	lncRNA	predicted gene 28674
chrY	89649580	89650069	-	89649584	89650069	A3SS	0.5	50	50	ENSMUST00000187502.2	ENSMUSG00000100574.2	Gm28674	chrY	lncRNA	predicted gene 28674
chrY	90287262;90288174	90287990;90288702	+	90287262	90288702	cassetteExon	0.5	100	100	ENSMUST00000186377.7	ENSMUSG00000100533.7	Gm29504	chrY	lncRNA	predicted gene 29504
chrY	90426017	90433057	+	90426017	90440862	A3SS	0.5	50	50	ENSMUST00000190558.7	ENSMUSG00000096178.8	Gm20837	chrY	protein_coding	predicted gene, 20837
chrY	90433720	90440862	+	90426017	90440862	A5SS	0.5	50	50	ENSMUST00000190558.7	ENSMUSG00000096178.8	Gm20837	chrY	protein_coding	predicted gene, 20837
chrY	90614838	90616279	-	90614838;90615551	90615367;90616279	ES	0.5	50	50	ENSMUST00000189170.7	ENSMUSG00000099619.7	Gm28300	chrY	lncRNA	predicted gene 28300
chrY	90676683	90678125	-	90676683;90677396	90677212;90678125	ES	0.5	50	50	ENSMUST00000187582.7	ENSMUSG00000099399.7	Gm28301	chrY	lncRNA	predicted gene 28301
chrY	90797248	90804594	+	90797248	90804565	A3SS	0.5	50	50	ENSMUST00000179483.9	ENSMUSG00000096768.9	Gm47283	chrY	lncRNA	predicted gene, 47283
chrY	90804949	90827618	+	90804686	90827618	A5SS	0.5	50	50	ENSMUST00000179483.9	ENSMUSG00000096768.9	Gm47283	chrY	lncRNA	predicted gene, 47283
